Query psy15838
Match_columns 399
No_of_seqs 200 out of 1233
Neff 5.7
Searched_HMMs 29240
Date Fri Aug 16 22:39:23 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy15838.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/15838hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3dou_A Ribosomal RNA large sub 100.0 2E-34 6.7E-39 263.8 15.3 183 138-366 2-185 (191)
2 2px2_A Genome polyprotein [con 100.0 9.1E-34 3.1E-38 271.4 10.2 207 105-366 13-230 (269)
3 3gcz_A Polyprotein; flavivirus 100.0 6.1E-34 2.1E-38 275.8 8.9 212 94-366 27-248 (282)
4 3eld_A Methyltransferase; flav 100.0 1.5E-32 5E-37 267.8 12.9 215 95-366 18-238 (300)
5 3evf_A RNA-directed RNA polyme 100.0 3.8E-32 1.3E-36 262.9 10.7 215 94-366 10-231 (277)
6 2plw_A Ribosomal RNA methyltra 99.9 5.5E-25 1.9E-29 198.2 15.8 183 140-366 1-200 (201)
7 3p8z_A Mtase, non-structural p 99.9 7.9E-24 2.7E-28 200.3 14.4 201 105-359 19-226 (267)
8 2nyu_A Putative ribosomal RNA 99.9 2E-23 6.9E-28 186.9 16.2 188 140-367 1-192 (196)
9 3r24_A NSP16, 2'-O-methyl tran 99.9 1.3E-23 4.4E-28 204.2 6.0 175 123-366 81-261 (344)
10 2p41_A Type II methyltransfera 99.9 2.2E-22 7.5E-27 197.3 14.2 177 139-367 61-239 (305)
11 3lkz_A Non-structural protein 99.9 1E-21 3.5E-26 191.1 15.4 205 105-361 34-246 (321)
12 2oxt_A Nucleoside-2'-O-methylt 99.9 7.9E-22 2.7E-26 189.8 13.4 174 139-367 53-233 (265)
13 2wa2_A Non-structural protein 99.8 6.3E-20 2.2E-24 177.6 13.3 173 139-366 61-240 (276)
14 1ej0_A FTSJ; methyltransferase 99.8 1.5E-17 5.3E-22 143.5 19.0 180 140-364 1-180 (180)
15 2hwk_A Helicase NSP2; rossman 99.7 2E-17 6.9E-22 159.6 8.5 94 269-366 205-301 (320)
16 2xyq_A Putative 2'-O-methyl tr 99.3 3.3E-12 1.1E-16 124.7 9.8 92 269-365 122-214 (290)
17 4auk_A Ribosomal RNA large sub 99.2 2.8E-11 9.6E-16 121.8 8.2 45 137-184 180-231 (375)
18 3trk_A Nonstructural polyprote 98.1 5.6E-06 1.9E-10 79.5 9.0 95 268-366 209-306 (324)
19 3id6_C Fibrillarin-like rRNA/T 98.1 6.4E-06 2.2E-10 77.6 7.8 150 142-344 58-215 (232)
20 3hp7_A Hemolysin, putative; st 97.9 1.5E-05 5.2E-10 77.6 8.0 43 139-184 63-105 (291)
21 4gua_A Non-structural polyprot 97.7 7.6E-05 2.6E-09 78.1 9.1 93 269-365 220-315 (670)
22 3lpm_A Putative methyltransfer 97.7 0.00027 9.3E-09 65.9 12.2 96 268-366 117-221 (259)
23 2ozv_A Hypothetical protein AT 97.7 0.00015 5.2E-09 68.2 9.7 166 166-365 38-214 (260)
24 4dzr_A Protein-(glutamine-N5) 97.6 0.00012 4.2E-09 64.7 7.7 157 166-364 32-207 (215)
25 3opn_A Putative hemolysin; str 97.4 0.00061 2.1E-08 63.5 10.4 56 139-204 15-70 (232)
26 2ipx_A RRNA 2'-O-methyltransfe 97.1 0.00012 4.2E-09 66.9 1.2 126 142-320 59-184 (233)
27 3sso_A Methyltransferase; macr 97.0 0.0026 8.9E-08 64.8 10.4 124 166-342 218-359 (419)
28 3cgg_A SAM-dependent methyltra 97.0 0.029 1E-06 48.2 15.3 73 269-350 106-180 (195)
29 1dus_A MJ0882; hypothetical pr 96.9 0.0097 3.3E-07 51.2 11.8 64 269-344 118-181 (194)
30 3ajd_A Putative methyltransfer 96.9 0.0008 2.7E-08 63.7 4.9 75 269-344 155-237 (274)
31 1ixk_A Methyltransferase; open 96.8 0.00099 3.4E-08 64.7 5.4 67 269-335 186-264 (315)
32 3m6w_A RRNA methylase; rRNA me 96.8 0.0026 9E-08 65.6 8.2 68 269-336 169-248 (464)
33 1sqg_A SUN protein, FMU protei 96.8 0.011 3.6E-07 59.7 12.6 131 166-336 248-393 (429)
34 3uwp_A Histone-lysine N-methyl 96.8 0.032 1.1E-06 57.1 16.0 104 87-204 82-207 (438)
35 3mti_A RRNA methylase; SAM-dep 96.7 0.0065 2.2E-07 52.9 9.4 90 268-360 87-183 (185)
36 3m4x_A NOL1/NOP2/SUN family pr 96.7 0.0036 1.2E-07 64.4 8.7 65 269-335 174-252 (456)
37 2frx_A Hypothetical protein YE 96.7 0.0072 2.5E-07 62.4 10.5 68 269-336 186-265 (479)
38 3a27_A TYW2, uncharacterized p 96.6 0.0021 7.3E-08 60.8 6.0 80 269-363 185-268 (272)
39 4fzv_A Putative methyltransfer 96.6 0.0031 1.1E-07 63.0 7.2 66 268-335 221-302 (359)
40 2yxl_A PH0851 protein, 450AA l 96.6 0.019 6.6E-07 58.3 13.0 68 269-336 329-408 (450)
41 3evz_A Methyltransferase; NYSG 96.5 0.022 7.7E-07 51.2 11.6 76 269-345 122-205 (230)
42 2b3t_A Protein methyltransfera 96.5 0.0056 1.9E-07 57.5 7.8 59 297-362 217-276 (276)
43 3adn_A Spermidine synthase; am 96.5 0.004 1.4E-07 60.1 6.6 86 268-361 155-244 (294)
44 3fpf_A Mtnas, putative unchara 96.4 0.0048 1.7E-07 60.2 6.8 96 269-381 187-283 (298)
45 3e23_A Uncharacterized protein 96.4 0.074 2.5E-06 47.0 14.0 92 268-368 100-206 (211)
46 2bm8_A Cephalosporin hydroxyla 96.3 0.0051 1.7E-07 57.0 6.4 130 167-347 84-221 (236)
47 3h2b_A SAM-dependent methyltra 96.3 0.11 3.9E-06 45.4 14.6 86 268-366 100-199 (203)
48 3e05_A Precorrin-6Y C5,15-meth 96.3 0.053 1.8E-06 47.9 12.5 59 269-344 107-166 (204)
49 3e8s_A Putative SAM dependent 96.3 0.039 1.3E-06 48.7 11.5 81 268-360 114-225 (227)
50 3eey_A Putative rRNA methylase 96.2 0.039 1.3E-06 48.3 11.0 52 269-322 92-143 (197)
51 3gjy_A Spermidine synthase; AP 96.1 0.0034 1.2E-07 61.7 4.3 86 269-361 158-246 (317)
52 1l3i_A Precorrin-6Y methyltran 96.1 0.0013 4.4E-08 56.8 1.0 62 269-347 99-161 (192)
53 3duw_A OMT, O-methyltransferas 96.1 0.022 7.6E-07 51.1 8.9 35 269-317 132-166 (223)
54 1nt2_A Fibrillarin-like PRE-rR 96.0 0.0066 2.3E-07 55.2 5.2 20 166-185 59-78 (210)
55 1jsx_A Glucose-inhibited divis 96.0 0.084 2.9E-06 46.4 12.1 73 269-360 131-203 (207)
56 3hm2_A Precorrin-6Y C5,15-meth 95.9 0.049 1.7E-06 46.4 10.1 53 269-338 93-145 (178)
57 3ofk_A Nodulation protein S; N 95.9 0.014 4.9E-07 51.8 6.8 69 268-345 112-188 (216)
58 3ggd_A SAM-dependent methyltra 95.8 0.02 7E-07 52.0 7.8 108 166-322 58-167 (245)
59 3mb5_A SAM-dependent methyltra 95.8 0.17 5.8E-06 46.1 13.9 57 269-343 161-220 (255)
60 3r3h_A O-methyltransferase, SA 95.8 0.012 4E-07 54.7 5.9 34 166-204 62-95 (242)
61 3iyl_W VP1; non-enveloped viru 95.7 0.021 7.1E-07 64.1 8.5 95 268-366 572-666 (1299)
62 2frn_A Hypothetical protein PH 95.7 0.0094 3.2E-07 56.5 5.1 59 269-342 191-253 (278)
63 3hem_A Cyclopropane-fatty-acyl 95.7 0.08 2.7E-06 49.9 11.5 49 269-323 136-188 (302)
64 3dh0_A SAM dependent methyltra 95.6 0.13 4.5E-06 45.4 12.2 78 268-361 104-192 (219)
65 1g8a_A Fibrillarin-like PRE-rR 95.6 0.0023 7.8E-08 57.9 0.3 21 166-186 75-95 (227)
66 3hnr_A Probable methyltransfer 95.6 0.063 2.2E-06 47.6 9.8 43 269-320 105-147 (220)
67 3ou2_A SAM-dependent methyltra 95.5 0.011 3.6E-07 52.4 4.3 101 167-321 49-149 (218)
68 4dmg_A Putative uncharacterize 95.5 0.01 3.5E-07 59.7 4.7 65 270-337 280-344 (393)
69 4df3_A Fibrillarin-like rRNA/T 95.5 0.0049 1.7E-07 58.0 2.1 21 166-186 79-99 (233)
70 2fk8_A Methoxy mycolic acid sy 95.5 0.041 1.4E-06 52.2 8.6 46 269-323 154-199 (318)
71 2b9e_A NOL1/NOP2/SUN domain fa 95.5 0.22 7.4E-06 48.3 13.9 67 269-336 173-253 (309)
72 4htf_A S-adenosylmethionine-de 95.5 0.056 1.9E-06 50.3 9.4 43 268-321 134-176 (285)
73 2p35_A Trans-aconitate 2-methy 95.4 0.14 4.7E-06 46.5 11.7 44 269-323 94-137 (259)
74 1inl_A Spermidine synthase; be 95.4 0.011 3.8E-07 56.8 4.4 86 269-361 162-251 (296)
75 3grz_A L11 mtase, ribosomal pr 95.4 0.0091 3.1E-07 52.9 3.5 60 269-344 124-184 (205)
76 3g5t_A Trans-aconitate 3-methy 95.3 0.027 9.3E-07 53.1 6.7 37 269-317 112-148 (299)
77 3lcc_A Putative methyl chlorid 95.3 0.63 2.1E-05 41.7 15.7 86 269-363 131-227 (235)
78 2zfu_A Nucleomethylin, cerebra 95.3 0.11 3.9E-06 45.9 10.5 62 269-342 114-176 (215)
79 3tfw_A Putative O-methyltransf 95.3 0.0082 2.8E-07 55.7 2.9 35 269-317 135-169 (248)
80 3dtn_A Putative methyltransfer 95.2 0.019 6.4E-07 51.7 5.0 45 269-322 108-152 (234)
81 2ih2_A Modification methylase 95.2 0.37 1.3E-05 47.3 14.8 147 167-361 42-209 (421)
82 1wxx_A TT1595, hypothetical pr 95.2 0.018 6E-07 57.1 5.1 52 269-322 278-329 (382)
83 3njr_A Precorrin-6Y methylase; 95.1 0.17 5.8E-06 45.3 11.0 50 269-336 121-170 (204)
84 3mgg_A Methyltransferase; NYSG 95.1 0.059 2E-06 49.7 8.2 34 148-184 24-57 (276)
85 4hg2_A Methyltransferase type 95.1 0.014 4.9E-07 55.0 4.0 43 268-322 97-139 (257)
86 1kpg_A CFA synthase;, cyclopro 95.1 0.16 5.3E-06 47.2 11.1 45 269-322 128-172 (287)
87 3f4k_A Putative methyltransfer 95.1 0.13 4.5E-06 46.7 10.4 40 269-320 113-152 (257)
88 3i9f_A Putative type 11 methyl 95.1 0.054 1.9E-06 46.1 7.3 66 268-345 73-148 (170)
89 4gek_A TRNA (CMO5U34)-methyltr 95.1 0.094 3.2E-06 49.3 9.6 19 167-185 73-91 (261)
90 3bus_A REBM, methyltransferase 95.0 0.12 4.1E-06 47.5 10.0 43 269-322 128-170 (273)
91 1ej6_A Lambda2; icosahedral, n 94.9 0.041 1.4E-06 61.4 7.6 95 268-366 568-662 (1289)
92 2i7c_A Spermidine synthase; tr 94.9 0.02 7E-07 54.5 4.7 85 269-361 150-238 (283)
93 3kkz_A Uncharacterized protein 94.9 0.087 3E-06 48.5 8.8 41 268-320 112-152 (267)
94 2ex4_A Adrenal gland protein A 94.9 0.2 6.9E-06 45.3 11.1 69 269-346 145-226 (241)
95 2pt6_A Spermidine synthase; tr 94.9 0.088 3E-06 51.2 9.2 85 269-361 188-276 (321)
96 1nkv_A Hypothetical protein YJ 94.9 0.17 5.7E-06 45.9 10.5 39 269-318 102-140 (256)
97 3p9n_A Possible methyltransfer 94.9 0.027 9.1E-07 49.4 5.0 43 269-321 112-156 (189)
98 3dli_A Methyltransferase; PSI- 94.9 0.016 5.5E-07 52.7 3.6 45 268-321 99-143 (240)
99 3tr6_A O-methyltransferase; ce 94.9 0.005 1.7E-07 55.4 0.1 35 269-317 139-173 (225)
100 4fsd_A Arsenic methyltransfera 94.8 0.17 5.8E-06 49.9 11.3 66 268-344 164-250 (383)
101 3vc1_A Geranyl diphosphate 2-C 94.8 0.13 4.5E-06 48.8 10.1 42 269-322 184-225 (312)
102 2as0_A Hypothetical protein PH 94.8 0.1 3.4E-06 51.8 9.4 52 269-322 288-339 (396)
103 2b2c_A Spermidine synthase; be 94.8 0.055 1.9E-06 52.6 7.3 84 269-361 180-268 (314)
104 1xtp_A LMAJ004091AAA; SGPP, st 94.7 0.96 3.3E-05 40.6 15.2 68 269-345 157-238 (254)
105 3g5l_A Putative S-adenosylmeth 94.7 0.49 1.7E-05 42.8 13.2 41 268-319 106-146 (253)
106 1uir_A Polyamine aminopropyltr 94.7 0.041 1.4E-06 53.2 6.1 85 269-361 150-241 (314)
107 1iy9_A Spermidine synthase; ro 94.7 0.042 1.4E-06 52.1 6.1 86 269-361 147-235 (275)
108 1o9g_A RRNA methyltransferase; 94.6 0.019 6.5E-07 52.8 3.4 35 166-204 53-87 (250)
109 3bwc_A Spermidine synthase; SA 94.6 0.15 5.2E-06 48.9 9.9 85 269-361 168-257 (304)
110 2o57_A Putative sarcosine dime 94.6 0.15 5E-06 47.7 9.6 42 269-321 149-190 (297)
111 3u81_A Catechol O-methyltransf 94.5 0.014 4.7E-07 52.7 2.3 54 269-336 133-186 (221)
112 1yzh_A TRNA (guanine-N(7)-)-me 94.5 0.011 3.9E-07 52.9 1.7 71 269-344 110-181 (214)
113 2igt_A SAM dependent methyltra 94.5 0.13 4.4E-06 50.3 9.2 68 269-338 224-292 (332)
114 4e2x_A TCAB9; kijanose, tetron 94.5 0.15 5E-06 50.5 9.8 111 151-318 98-208 (416)
115 3g07_A 7SK snRNA methylphospha 94.5 0.026 9E-07 53.5 4.2 33 166-204 48-80 (292)
116 2esr_A Methyltransferase; stru 94.4 0.023 7.8E-07 49.0 3.4 32 166-204 33-64 (177)
117 2yvl_A TRMI protein, hypotheti 94.3 0.38 1.3E-05 43.3 11.5 57 269-343 157-213 (248)
118 4dcm_A Ribosomal RNA large sub 94.3 0.2 6.9E-06 49.7 10.2 64 269-343 291-354 (375)
119 3jwh_A HEN1; methyltransferase 94.3 0.18 6.3E-06 44.7 9.1 42 269-319 101-142 (217)
120 2b25_A Hypothetical protein; s 94.3 0.31 1.1E-05 46.8 11.3 49 269-335 186-234 (336)
121 2yxd_A Probable cobalt-precorr 94.2 0.011 3.8E-07 50.5 0.9 63 269-350 99-161 (183)
122 1fbn_A MJ fibrillarin homologu 94.2 0.014 4.6E-07 53.2 1.5 33 166-204 76-108 (230)
123 2b78_A Hypothetical protein SM 94.2 0.028 9.6E-07 56.0 3.9 66 269-337 284-349 (385)
124 3gu3_A Methyltransferase; alph 94.2 0.24 8.3E-06 46.2 10.1 41 269-320 88-128 (284)
125 3lbf_A Protein-L-isoaspartate 94.2 0.25 8.6E-06 43.5 9.7 35 269-320 142-176 (210)
126 1yb2_A Hypothetical protein TA 94.2 0.24 8.3E-06 46.2 10.1 58 269-344 178-236 (275)
127 1vl5_A Unknown conserved prote 94.2 0.2 7E-06 45.7 9.4 42 269-321 102-143 (260)
128 3q87_B N6 adenine specific DNA 94.2 0.34 1.2E-05 41.9 10.3 115 167-344 26-148 (170)
129 1ws6_A Methyltransferase; stru 94.1 0.024 8.4E-07 48.0 2.8 43 269-322 109-151 (171)
130 3bkx_A SAM-dependent methyltra 94.0 0.28 9.6E-06 45.0 10.1 48 148-204 31-78 (275)
131 2avd_A Catechol-O-methyltransf 94.0 0.1 3.4E-06 46.8 6.8 34 269-316 144-177 (229)
132 2fca_A TRNA (guanine-N(7)-)-me 94.0 0.031 1.1E-06 50.5 3.4 33 166-204 40-72 (213)
133 2fhp_A Methylase, putative; al 93.9 0.091 3.1E-06 45.1 6.2 44 269-322 115-158 (187)
134 2xvm_A Tellurite resistance pr 93.9 0.68 2.3E-05 39.8 11.9 65 269-343 96-171 (199)
135 1pjz_A Thiopurine S-methyltran 93.9 0.052 1.8E-06 48.5 4.7 31 166-204 24-54 (203)
136 2o07_A Spermidine synthase; st 93.8 0.066 2.3E-06 51.6 5.6 86 269-361 167-255 (304)
137 1y8c_A S-adenosylmethionine-de 93.8 3.1 0.00011 36.7 16.3 40 269-316 100-140 (246)
138 3dr5_A Putative O-methyltransf 93.7 0.054 1.8E-06 49.6 4.4 34 269-316 128-161 (221)
139 1o54_A SAM-dependent O-methylt 93.7 0.19 6.4E-06 46.8 8.3 58 269-344 180-238 (277)
140 3v97_A Ribosomal RNA large sub 93.6 0.047 1.6E-06 58.9 4.5 51 269-319 608-658 (703)
141 3ccf_A Cyclopropane-fatty-acyl 93.5 0.4 1.4E-05 44.4 10.2 42 269-321 116-157 (279)
142 3ntv_A MW1564 protein; rossman 93.5 0.018 6.3E-07 52.5 0.9 34 269-316 141-174 (232)
143 1i9g_A Hypothetical protein RV 93.5 0.4 1.4E-05 44.2 10.1 58 269-344 170-229 (280)
144 3iv6_A Putative Zn-dependent a 93.4 0.55 1.9E-05 44.5 11.1 54 269-332 109-162 (261)
145 2vdw_A Vaccinia virus capping 93.4 0.064 2.2E-06 51.6 4.6 44 269-320 128-171 (302)
146 1xdz_A Methyltransferase GIDB; 93.4 0.42 1.4E-05 43.5 9.9 33 269-316 140-172 (240)
147 3pfg_A N-methyltransferase; N, 93.3 0.24 8.3E-06 45.3 8.3 42 269-318 109-151 (263)
148 2nxc_A L11 mtase, ribosomal pr 93.3 0.1 3.5E-06 48.5 5.7 60 269-344 183-243 (254)
149 3m70_A Tellurite resistance pr 93.3 0.23 7.7E-06 46.2 8.2 43 268-319 182-224 (286)
150 2gs9_A Hypothetical protein TT 93.3 0.29 1E-05 43.0 8.5 43 269-322 94-136 (211)
151 2qe6_A Uncharacterized protein 93.3 0.17 6E-06 47.7 7.4 115 166-321 79-199 (274)
152 3sm3_A SAM-dependent methyltra 93.3 0.19 6.6E-06 44.5 7.3 46 268-321 99-144 (235)
153 3ujc_A Phosphoethanolamine N-m 93.2 0.16 5.4E-06 46.0 6.8 45 268-321 118-162 (266)
154 3jwg_A HEN1, methyltransferase 93.2 0.35 1.2E-05 42.8 9.0 42 269-319 101-142 (219)
155 1ri5_A MRNA capping enzyme; me 93.2 0.46 1.6E-05 43.8 10.1 47 268-321 131-177 (298)
156 1mjf_A Spermidine synthase; sp 93.2 0.15 5.2E-06 48.2 6.9 84 269-361 151-238 (281)
157 1wzn_A SAM-dependent methyltra 93.1 0.47 1.6E-05 42.9 9.8 19 166-184 43-61 (252)
158 2gpy_A O-methyltransferase; st 93.1 0.019 6.6E-07 52.0 0.4 35 269-317 125-159 (233)
159 1ve3_A Hypothetical protein PH 93.1 0.26 9.1E-06 43.5 7.9 43 269-320 102-144 (227)
160 2pxx_A Uncharacterized protein 93.1 0.39 1.3E-05 41.8 8.9 53 269-321 106-162 (215)
161 3dlc_A Putative S-adenosyl-L-m 93.0 0.19 6.4E-06 44.0 6.8 38 269-317 110-147 (219)
162 3cc8_A Putative methyltransfer 93.0 0.43 1.5E-05 41.9 9.1 42 269-321 92-133 (230)
163 1i1n_A Protein-L-isoaspartate 93.0 0.12 4E-06 46.3 5.4 21 166-186 79-99 (226)
164 2ift_A Putative methylase HI07 93.0 0.26 9E-06 43.8 7.7 17 166-182 55-71 (201)
165 3l8d_A Methyltransferase; stru 92.9 0.26 9E-06 44.1 7.8 43 268-321 114-156 (242)
166 2pwy_A TRNA (adenine-N(1)-)-me 92.9 0.33 1.1E-05 43.9 8.5 56 269-342 165-221 (258)
167 3c3y_A Pfomt, O-methyltransfer 92.9 0.034 1.2E-06 51.2 1.8 20 166-185 72-91 (237)
168 2p7i_A Hypothetical protein; p 92.9 0.23 7.9E-06 44.2 7.3 42 269-321 102-144 (250)
169 1vbf_A 231AA long hypothetical 92.8 0.54 1.8E-05 42.0 9.7 36 269-321 133-168 (231)
170 1fp1_D Isoliquiritigenin 2'-O- 92.8 0.4 1.4E-05 46.8 9.4 42 141-185 189-230 (372)
171 2yqz_A Hypothetical protein TT 92.7 0.91 3.1E-05 40.9 11.2 41 269-321 103-143 (263)
172 2gb4_A Thiopurine S-methyltran 92.7 0.18 6.2E-06 47.1 6.6 65 269-342 151-224 (252)
173 1dl5_A Protein-L-isoaspartate 92.7 0.47 1.6E-05 45.3 9.7 33 269-318 143-175 (317)
174 1sui_A Caffeoyl-COA O-methyltr 92.7 0.037 1.3E-06 51.5 1.7 20 166-185 81-100 (247)
175 3c0k_A UPF0064 protein YCCW; P 92.6 0.11 3.9E-06 51.4 5.2 52 269-322 292-343 (396)
176 3cbg_A O-methyltransferase; cy 92.5 0.47 1.6E-05 43.1 8.9 35 269-317 147-181 (232)
177 2i62_A Nicotinamide N-methyltr 92.5 1.4 4.9E-05 39.7 12.1 69 269-344 156-238 (265)
178 2qfm_A Spermine synthase; sper 92.4 0.28 9.5E-06 49.0 7.7 72 269-342 266-339 (364)
179 1zx0_A Guanidinoacetate N-meth 92.3 0.12 4E-06 46.9 4.6 43 269-317 127-169 (236)
180 3tma_A Methyltransferase; thum 92.1 0.14 4.6E-06 49.9 5.0 47 269-318 271-317 (354)
181 1xxl_A YCGJ protein; structura 91.9 0.77 2.6E-05 41.5 9.6 43 269-322 86-128 (239)
182 3bxo_A N,N-dimethyltransferase 91.9 1.1 3.9E-05 39.7 10.6 45 269-321 99-144 (239)
183 3g89_A Ribosomal RNA small sub 91.9 2 6.8E-05 39.7 12.6 79 269-364 150-230 (249)
184 2yxe_A Protein-L-isoaspartate 91.9 0.78 2.7E-05 40.4 9.4 35 269-320 145-179 (215)
185 3ege_A Putative methyltransfer 91.8 0.73 2.5E-05 42.3 9.4 40 269-320 93-132 (261)
186 3lst_A CALO1 methyltransferase 91.8 0.39 1.3E-05 46.4 7.8 32 149-184 173-204 (348)
187 1p91_A Ribosomal RNA large sub 91.7 2 6.9E-05 39.1 12.3 35 269-321 147-181 (269)
188 2y1w_A Histone-arginine methyl 91.7 0.22 7.6E-06 48.5 6.0 40 269-317 115-154 (348)
189 2hnk_A SAM-dependent O-methylt 91.5 0.052 1.8E-06 49.5 1.2 36 269-318 146-181 (239)
190 2pjd_A Ribosomal RNA small sub 91.5 0.46 1.6E-05 46.0 8.0 65 269-344 260-324 (343)
191 3bkw_A MLL3908 protein, S-aden 91.2 0.69 2.4E-05 41.2 8.4 41 269-320 106-146 (243)
192 1vlm_A SAM-dependent methyltra 91.2 0.93 3.2E-05 40.2 9.2 42 269-321 101-142 (219)
193 2fyt_A Protein arginine N-meth 91.0 0.17 5.8E-06 49.3 4.4 19 166-184 66-84 (340)
194 3thr_A Glycine N-methyltransfe 90.9 0.85 2.9E-05 42.2 8.9 48 268-320 128-177 (293)
195 2fpo_A Methylase YHHF; structu 90.8 0.071 2.4E-06 47.6 1.3 16 167-182 57-72 (202)
196 3bgv_A MRNA CAP guanine-N7 met 90.6 1.1 3.9E-05 42.1 9.6 46 269-321 113-158 (313)
197 3dmg_A Probable ribosomal RNA 90.5 0.43 1.5E-05 47.5 6.9 64 269-343 297-360 (381)
198 1jg1_A PIMT;, protein-L-isoasp 90.3 0.56 1.9E-05 42.4 6.9 36 269-321 157-192 (235)
199 3c3p_A Methyltransferase; NP_9 90.3 0.059 2E-06 47.9 0.3 19 166-184 58-76 (210)
200 3orh_A Guanidinoacetate N-meth 90.3 0.048 1.7E-06 50.1 -0.3 43 268-316 126-168 (236)
201 3reo_A (ISO)eugenol O-methyltr 90.2 1.8 6E-05 42.3 10.9 34 148-184 190-223 (368)
202 3q7e_A Protein arginine N-meth 90.1 0.75 2.6E-05 44.8 8.1 19 166-184 68-86 (349)
203 3r0q_C Probable protein argini 90.1 0.39 1.3E-05 47.4 6.1 41 269-317 128-168 (376)
204 3d2l_A SAM-dependent methyltra 90.1 0.29 9.8E-06 43.8 4.8 43 269-319 95-138 (243)
205 3g2m_A PCZA361.24; SAM-depende 90.0 1.1 3.6E-05 42.0 8.8 44 269-321 149-193 (299)
206 1x19_A CRTF-related protein; m 89.9 1.5 5.3E-05 42.2 10.2 33 149-185 179-211 (359)
207 3ocj_A Putative exported prote 89.8 0.59 2E-05 44.1 6.9 44 269-320 186-229 (305)
208 2ip2_A Probable phenazine-spec 89.5 0.53 1.8E-05 44.8 6.4 31 149-184 157-187 (334)
209 3mcz_A O-methyltransferase; ad 89.5 1.2 4.1E-05 42.6 9.0 35 147-184 165-199 (352)
210 2kw5_A SLR1183 protein; struct 88.2 0.92 3.1E-05 39.4 6.6 42 269-321 93-134 (202)
211 2ar0_A M.ecoki, type I restric 87.9 0.22 7.4E-06 52.0 2.6 24 166-189 171-194 (541)
212 3k6r_A Putative transferase PH 87.5 1.5 5.3E-05 41.8 8.1 32 167-205 128-159 (278)
213 1xj5_A Spermidine synthase 1; 87.3 0.52 1.8E-05 46.1 4.8 64 269-339 193-258 (334)
214 3gwz_A MMCR; methyltransferase 86.7 4.6 0.00016 39.2 11.2 33 148-184 190-222 (369)
215 2p8j_A S-adenosylmethionine-de 85.5 1.1 3.9E-05 38.9 5.6 45 269-322 88-132 (209)
216 4hc4_A Protein arginine N-meth 84.3 0.65 2.2E-05 46.4 3.9 51 123-180 49-99 (376)
217 3b3j_A Histone-arginine methyl 84.0 0.99 3.4E-05 46.3 5.1 19 166-184 160-178 (480)
218 1g6q_1 HnRNP arginine N-methyl 83.7 2.6 8.9E-05 40.5 7.7 19 166-184 40-58 (328)
219 2cmg_A Spermidine synthase; tr 83.5 2.4 8.3E-05 39.7 7.2 75 269-361 138-215 (262)
220 3axs_A Probable N(2),N(2)-dime 83.1 0.82 2.8E-05 45.9 4.0 17 166-182 54-70 (392)
221 3i53_A O-methyltransferase; CO 83.0 3.9 0.00013 38.8 8.6 31 150-184 159-189 (332)
222 4a6d_A Hydroxyindole O-methylt 79.6 16 0.00053 35.3 11.7 36 145-184 164-199 (353)
223 3s1s_A Restriction endonucleas 78.6 26 0.00088 38.8 13.9 46 297-342 444-493 (878)
224 1fp2_A Isoflavone O-methyltran 78.6 4.3 0.00015 39.0 7.3 19 166-184 190-208 (352)
225 1zg3_A Isoflavanone 4'-O-methy 78.2 5 0.00017 38.6 7.6 19 166-184 195-213 (358)
226 3gnl_A Uncharacterized protein 75.6 3.7 0.00013 38.5 5.7 38 297-338 104-142 (244)
227 3g7u_A Cytosine-specific methy 75.0 2.2 7.5E-05 42.4 4.1 20 165-184 2-21 (376)
228 3kr9_A SAM-dependent methyltra 74.3 6.2 0.00021 36.4 6.8 36 297-336 98-133 (225)
229 2qm3_A Predicted methyltransfe 73.2 57 0.0019 31.5 13.8 39 269-319 240-279 (373)
230 3dp7_A SAM-dependent methyltra 72.7 16 0.00056 35.1 9.7 19 166-184 181-199 (363)
231 3me5_A Cytosine-specific methy 71.2 2.4 8.3E-05 43.7 3.5 21 164-184 87-107 (482)
232 3lec_A NADB-rossmann superfami 70.1 9 0.00031 35.5 6.8 32 301-336 108-139 (230)
233 3giw_A Protein of unknown func 67.2 8.4 0.00029 36.8 6.1 20 303-322 185-204 (277)
234 1ne2_A Hypothetical protein TA 67.0 13 0.00044 32.1 6.9 19 166-184 53-71 (200)
235 2a14_A Indolethylamine N-methy 65.2 14 0.00049 33.6 7.2 69 269-345 155-238 (263)
236 3mq2_A 16S rRNA methyltransfer 62.4 4.8 0.00017 35.3 3.2 33 166-204 29-61 (218)
237 2aot_A HMT, histamine N-methyl 62.2 13 0.00043 34.5 6.2 41 269-320 134-174 (292)
238 1m6y_A S-adenosyl-methyltransf 61.9 5.9 0.0002 38.1 3.9 27 297-323 224-250 (301)
239 3htx_A HEN1; HEN1, small RNA m 60.9 26 0.0009 38.9 9.2 18 166-183 723-740 (950)
240 1wy7_A Hypothetical protein PH 58.1 15 0.0005 31.7 5.6 19 166-184 51-69 (207)
241 2f8l_A Hypothetical protein LM 57.8 5.7 0.0002 38.1 3.1 39 165-204 131-169 (344)
242 3izx_A Structural protein VP3; 57.5 17 0.0006 40.0 6.9 86 268-360 607-695 (1058)
243 3p2e_A 16S rRNA methylase; met 57.0 7.9 0.00027 35.0 3.7 32 166-203 26-57 (225)
244 2yx1_A Hypothetical protein MJ 55.8 6 0.0002 38.1 2.8 76 269-363 257-332 (336)
245 1r18_A Protein-L-isoaspartate( 54.3 20 0.00067 31.7 5.8 36 269-321 162-197 (227)
246 2h00_A Methyltransferase 10 do 53.4 8.9 0.00031 34.5 3.4 54 304-362 198-252 (254)
247 3mag_A VP39; methylated adenin 52.5 1.4E+02 0.0047 29.0 11.6 150 167-362 63-215 (307)
248 3c6k_A Spermine synthase; sper 51.3 15 0.00053 36.7 5.0 74 268-344 282-358 (381)
249 2vdv_E TRNA (guanine-N(7)-)-me 51.2 8.6 0.0003 34.7 3.0 19 166-184 51-69 (246)
250 3m33_A Uncharacterized protein 50.4 9.7 0.00033 33.8 3.1 19 166-184 50-68 (226)
251 2ld4_A Anamorsin; methyltransf 50.0 13 0.00045 31.3 3.8 59 269-337 62-128 (176)
252 3fut_A Dimethyladenosine trans 49.7 21 0.00072 33.6 5.5 18 167-184 49-66 (271)
253 1nv8_A HEMK protein; class I a 47.6 10 0.00035 35.6 3.0 31 167-204 126-156 (284)
254 1vpt_A VP39; RNA CAP, poly(A) 47.3 1.3E+02 0.0044 29.7 10.6 149 167-361 78-229 (348)
255 3p9c_A Caffeic acid O-methyltr 47.0 33 0.0011 33.1 6.6 34 148-184 188-221 (364)
256 1yub_A Ermam, rRNA methyltrans 46.7 12 0.00041 33.9 3.2 31 166-204 31-61 (245)
257 2okc_A Type I restriction enzy 46.7 8.6 0.00029 38.5 2.4 23 166-188 173-195 (445)
258 3o4f_A Spermidine synthase; am 46.4 23 0.00078 34.1 5.2 87 268-361 155-244 (294)
259 1zq9_A Probable dimethyladenos 46.0 21 0.0007 33.4 4.8 19 166-184 30-48 (285)
260 1qam_A ERMC' methyltransferase 45.7 19 0.00065 32.8 4.4 19 166-184 32-50 (244)
261 3ckk_A TRNA (guanine-N(7)-)-me 44.1 12 0.00041 34.1 2.7 18 166-183 48-65 (235)
262 3dxy_A TRNA (guanine-N(7)-)-me 44.1 13 0.00045 33.3 3.0 64 268-336 103-166 (218)
263 2k4m_A TR8_protein, UPF0146 pr 43.6 32 0.0011 30.2 5.2 32 167-205 38-70 (153)
264 1u2z_A Histone-lysine N-methyl 42.1 26 0.0009 35.4 5.1 20 166-185 244-263 (433)
265 3gdh_A Trimethylguanosine synt 40.4 14 0.00048 32.8 2.5 31 166-204 80-110 (241)
266 2r3s_A Uncharacterized protein 39.3 25 0.00087 32.7 4.3 33 149-184 152-185 (335)
267 2h1r_A Dimethyladenosine trans 38.4 23 0.00078 33.4 3.8 19 166-184 44-62 (299)
268 3ua3_A Protein arginine N-meth 37.1 51 0.0018 35.8 6.6 44 268-320 493-536 (745)
269 3uzu_A Ribosomal RNA small sub 36.3 30 0.001 32.6 4.2 19 167-185 45-63 (279)
270 3gru_A Dimethyladenosine trans 34.2 41 0.0014 32.0 4.9 30 152-185 42-71 (295)
271 3ftd_A Dimethyladenosine trans 33.0 24 0.00081 32.5 2.9 18 167-184 34-51 (249)
272 3cvo_A Methyltransferase-like 32.4 44 0.0015 30.2 4.5 33 269-317 121-153 (202)
273 1qzz_A RDMB, aclacinomycin-10- 32.3 39 0.0013 32.1 4.4 32 150-185 172-203 (374)
274 1tw3_A COMT, carminomycin 4-O- 32.3 41 0.0014 31.8 4.5 30 151-184 174-203 (360)
275 2pbf_A Protein-L-isoaspartate 32.1 26 0.00088 30.7 2.8 35 269-320 161-195 (227)
276 1r18_A Protein-L-isoaspartate( 31.6 25 0.00085 31.0 2.7 21 166-186 86-106 (227)
277 3bzb_A Uncharacterized protein 31.4 41 0.0014 31.1 4.2 19 166-184 81-99 (281)
278 4gqb_A Protein arginine N-meth 30.7 34 0.0012 36.4 4.0 39 268-315 426-464 (637)
279 3tqs_A Ribosomal RNA small sub 30.7 37 0.0012 31.5 3.8 18 167-184 32-49 (255)
280 3ubt_Y Modification methylase 30.2 26 0.0009 33.0 2.7 19 166-184 1-19 (331)
281 2avn_A Ubiquinone/menaquinone 29.4 28 0.00097 31.3 2.7 42 269-321 113-155 (260)
282 3khk_A Type I restriction-modi 28.7 15 0.00053 38.1 0.9 21 167-187 247-267 (544)
283 1af7_A Chemotaxis receptor met 28.2 26 0.00088 33.0 2.3 39 269-316 212-250 (274)
284 2a14_A Indolethylamine N-methy 27.2 30 0.001 31.4 2.5 15 166-180 57-71 (263)
285 1boo_A Protein (N-4 cytosine-s 26.4 66 0.0022 30.6 4.8 51 268-320 31-86 (323)
286 1qyr_A KSGA, high level kasuga 25.4 52 0.0018 30.3 3.8 16 167-183 24-39 (252)
287 2kfe_A Meucin-24; alpha-helix, 25.0 46 0.0016 20.7 2.1 17 93-109 6-22 (26)
288 3ldu_A Putative methylase; str 24.6 4.2E+02 0.014 25.7 10.4 20 166-185 197-216 (385)
289 3ufb_A Type I restriction-modi 23.8 39 0.0013 34.8 2.8 24 166-189 219-242 (530)
290 3bzb_A Uncharacterized protein 21.9 1.6E+02 0.0054 27.0 6.4 61 269-342 162-234 (281)
291 3lcv_B Sisomicin-gentamicin re 21.8 67 0.0023 30.8 3.8 16 165-180 133-148 (281)
292 2g72_A Phenylethanolamine N-me 21.8 47 0.0016 30.3 2.7 68 269-343 173-254 (289)
293 2dul_A N(2),N(2)-dimethylguano 21.4 45 0.0015 32.8 2.6 19 166-184 49-67 (378)
294 3lkd_A Type I restriction-modi 20.6 34 0.0012 35.5 1.6 76 299-375 338-419 (542)
295 3qv2_A 5-cytosine DNA methyltr 20.3 57 0.002 31.5 3.1 21 164-184 9-29 (327)
296 3tm4_A TRNA (guanine N2-)-meth 20.0 56 0.0019 31.7 2.9 19 166-184 219-237 (373)
No 1
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=100.00 E-value=2e-34 Score=263.79 Aligned_cols=183 Identities=22% Similarity=0.293 Sum_probs=144.6
Q ss_pred chhhhHHHHHHHHHHHHhCCCCCCCCCCceEEEeccCCChhHHHHHHhhhccCCCCccceeccccCCCcCCCCCCcEEec
Q psy15838 138 KPQLATQAWCKFHEIVHSYNIVPQQENSFTSIHLCEAPGAFITSLNHYLKLHHPRMQWDWIANTLNPHYEGNSFDEMISD 217 (399)
Q Consensus 138 ~~e~~trAw~KL~EId~~f~l~~~~~~~~~vlDLceaPGgFsqaln~yl~~~~~~~~w~~~a~sLnP~~e~n~~~~vI~d 217 (399)
..+||+||+|||.||+++|++++++. +|||||||||+|++++... ....+|+++.|.
T Consensus 2 ~~~yr~Ra~~KL~ei~~~~~~~~~g~---~VLDlG~G~G~~s~~la~~--------~~~V~gvD~~~~------------ 58 (191)
T 3dou_A 2 SLQLRSRAAFKLEFLLDRYRVVRKGD---AVIEIGSSPGGWTQVLNSL--------ARKIISIDLQEM------------ 58 (191)
T ss_dssp --CTTSHHHHHHHHHHHHHCCSCTTC---EEEEESCTTCHHHHHHTTT--------CSEEEEEESSCC------------
T ss_pred CCCCCCcHHHHHHHHHHHcCCCCCCC---EEEEEeecCCHHHHHHHHc--------CCcEEEEecccc------------
Confidence 46899999999999999999988764 9999999999999976442 124566666553
Q ss_pred cccccccCccccCCC-ccccCCCChHHHHHHHHhhhhhhccCCCCCCCCCCCCcccEEEecCCCCCCCCCchhHHHHHHH
Q psy15838 218 DRLILGTHRKWYFGP-DNTGNILVQNFVSHFKQHIGFLLIHDTSLAPHCTHASHCFLVTADGSFDCQGNPGEQEILVGKL 296 (399)
Q Consensus 218 D~~~~~~~~~w~~G~-d~tGDI~~~~~i~~i~~~v~~~~~~~~~~~~~~~~~~~vDLV~ADGs~d~sg~~~~qe~~s~~L 296 (399)
...+ ++ ..+||+++..+.+.+...+.. . ..+++|+|+|||+++++|.+..|+..+..+
T Consensus 59 -----~~~~----~v~~~~~D~~~~~~~~~~~~~~~~---~---------~~~~~D~Vlsd~~~~~~g~~~~d~~~~~~l 117 (191)
T 3dou_A 59 -----EEIA----GVRFIRCDIFKETIFDDIDRALRE---E---------GIEKVDDVVSDAMAKVSGIPSRDHAVSYQI 117 (191)
T ss_dssp -----CCCT----TCEEEECCTTSSSHHHHHHHHHHH---H---------TCSSEEEEEECCCCCCCSCHHHHHHHHHHH
T ss_pred -----ccCC----CeEEEEccccCHHHHHHHHHHhhc---c---------cCCcceEEecCCCcCCCCCcccCHHHHHHH
Confidence 1222 22 379999998777766653310 0 013799999999999999999999999999
Q ss_pred HHHHHHHHHhccCCCCEEEEeEccCCCCCHHHHHHHHHhcCCeeeeecCCCCCCCCceEEEEEeeccCCc
Q psy15838 297 HYREVQIALSLLHNGGNLVIKIFTIFESDTICLMYLLACLFTSVDLFKPATSKEGNSEIYVICRDFHSVC 366 (399)
Q Consensus 297 ~~~el~~Al~~Lr~GG~fVlK~F~~~e~~t~~Ll~lL~~~F~~V~v~KP~aSR~~sSE~YlVc~gf~g~~ 366 (399)
+..++..|..+|+|||.||+|+|.+.+ +..++..|...|.+|+++||.+||++|+|+|+||+||+...
T Consensus 118 ~~~~l~~a~~~LkpGG~lv~k~~~~~~--~~~~~~~l~~~F~~v~~~kP~asR~~s~E~y~v~~~~~~~~ 185 (191)
T 3dou_A 118 GQRVMEIAVRYLRNGGNVLLKQFQGDM--TNDFIAIWRKNFSSYKISKPPASRGSSSEIYIMFFGFKAEG 185 (191)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEEECSTH--HHHHHHHHGGGEEEEEEECC------CCEEEEEEEEECCC-
T ss_pred HHHHHHHHHHHccCCCEEEEEEcCCCC--HHHHHHHHHHhcCEEEEECCCCccCCCceEEEEEeeecccc
Confidence 999999999999999999999999965 78999999999999999999999999999999999998654
No 2
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=100.00 E-value=9.1e-34 Score=271.36 Aligned_cols=207 Identities=13% Similarity=0.109 Sum_probs=146.1
Q ss_pred hhhcCccchhHHHhhhcc----cC--chhhHHHHHHhhcchhhhHHHHHHHHHHHHhCCCCCCCCCCceEEEeccCCChh
Q psy15838 105 KSNLNHVHLKTWHQHTNF----VN--RSSKVVQSVKRFIKPQLATQAWCKFHEIVHSYNIVPQQENSFTSIHLCEAPGAF 178 (399)
Q Consensus 105 K~~l~~~~~~~w~~ht~~----~n--~~~~i~~~vk~~~~~e~~trAw~KL~EId~~f~l~~~~~~~~~vlDLceaPGgF 178 (399)
|.+||.++.+++.+.... +| +|+..++. .+.....|+|||+|||.||++++ +++++. +|||||||||||
T Consensus 13 k~~ln~~~k~~f~~y~~~~i~e~dr~~a~~~~~~-g~~~~g~yRSRAayKL~EIdeK~-likpg~---~VVDLGaAPGGW 87 (269)
T 2px2_A 13 KEKLNAMGKEEFFSYRKEAILEVDRTEARRARRE-GNKVGGHPVSRGTAKLRWLVERR-FVQPIG---KVVDLGCGRGGW 87 (269)
T ss_dssp HHHHHTSCHHHHHHHHTTTCEEECGGGTTC--------CCSCCSSTHHHHHHHHHHTT-SCCCCE---EEEEETCTTSHH
T ss_pred HHHHhccCHHHHHHHhhcCceEechHHHHHHHhc-CCCcCCCcccHHHHHHHHHHHcC-CCCCCC---EEEEcCCCCCHH
Confidence 566666776666443321 22 23333332 12233689999999999999998 998864 999999999999
Q ss_pred HHHHHHhhhccCCCCccceeccccCCCcCCCCCCcEEecc--ccccccC-ccccCCCcccc-CCCChHHHHHHHHhhhhh
Q psy15838 179 ITSLNHYLKLHHPRMQWDWIANTLNPHYEGNSFDEMISDD--RLILGTH-RKWYFGPDNTG-NILVQNFVSHFKQHIGFL 254 (399)
Q Consensus 179 sqaln~yl~~~~~~~~w~~~a~sLnP~~e~n~~~~vI~dD--~~~~~~~-~~w~~G~d~tG-DI~~~~~i~~i~~~v~~~ 254 (399)
||++....... . . .+.+|+.| ..++.+. +.|.+-...+| ||++.
T Consensus 88 SQvAa~~~~vg--~----V-------------~G~vig~D~~~~P~~~~~~Gv~~i~~~~G~Df~~~------------- 135 (269)
T 2px2_A 88 SYYAATMKNVQ--E----V-------------RGYTKGGPGHEEPMLMQSYGWNIVTMKSGVDVFYK------------- 135 (269)
T ss_dssp HHHHTTSTTEE--E----E-------------EEECCCSTTSCCCCCCCSTTGGGEEEECSCCGGGS-------------
T ss_pred HHHHhhhcCCC--C----c-------------eeEEEccccccCCCcccCCCceEEEeeccCCccCC-------------
Confidence 99765531000 0 0 12344555 3333332 33322111337 99861
Q ss_pred hccCCCCCCCCCCCCcccEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHhccCCCC-EEEEeEccCCCCCHHHHHHHH
Q psy15838 255 LIHDTSLAPHCTHASHCFLVTADGSFDCQGNPGEQEILVGKLHYREVQIALSLLHNGG-NLVIKIFTIFESDTICLMYLL 333 (399)
Q Consensus 255 ~~~~~~~~~~~~~~~~vDLV~ADGs~d~sg~~~~qe~~s~~L~~~el~~Al~~Lr~GG-~fVlK~F~~~e~~t~~Ll~lL 333 (399)
...++|+|+|||+|+ +|++..|+..++. ++.+|...|++|| +||+|+|++.......++..|
T Consensus 136 ------------~~~~~DvVLSDMAPn-SG~~~vD~~Rs~~----aL~~A~~~Lk~gG~~FvvKVFqg~~~~~~~~l~~l 198 (269)
T 2px2_A 136 ------------PSEISDTLLCDIGES-SPSAEIEEQRTLR----ILEMVSDWLSRGPKEFCIKILCPYMPKVIEKLESL 198 (269)
T ss_dssp ------------CCCCCSEEEECCCCC-CSCHHHHHHHHHH----HHHHHHHHHTTCCSEEEEEESCTTSHHHHHHHHHH
T ss_pred ------------CCCCCCEEEeCCCCC-CCccHHHHHHHHH----HHHHHHHHhhcCCcEEEEEECCCCchHHHHHHHHH
Confidence 135799999999999 9999999887755 8899999999999 999999998777788889999
Q ss_pred HhcCCeeeeecCCCCCCCCceEEEEEeeccCCc
Q psy15838 334 ACLFTSVDLFKPATSKEGNSEIYVICRDFHSVC 366 (399)
Q Consensus 334 ~~~F~~V~v~KP~aSR~~sSE~YlVc~gf~g~~ 366 (399)
+..|.+|.+.|| +||..|+|+|+||+.-..+-
T Consensus 199 k~~F~~vkvk~p-aSR~~S~E~YlVa~~~~n~~ 230 (269)
T 2px2_A 199 QRRFGGGLVRVP-LSRNSNHEMYWVSGASGNIV 230 (269)
T ss_dssp HHHHCCEEECCT-TSCTTCCCEEEETTCCSCHH
T ss_pred HHHcCCEEEECC-CCCCCCccEEEEecccCcHH
Confidence 999999997445 99999999999997765444
No 3
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=100.00 E-value=6.1e-34 Score=275.85 Aligned_cols=212 Identities=13% Similarity=0.071 Sum_probs=149.5
Q ss_pred HHHHHHHHHHH-hhhcCccchhHHHhhhcccC--chhhHHHHHHhhcchhhhHHHHHHHHHHHHhCCCCCCCCCCceEEE
Q psy15838 94 FQALKEKLNDV-KSNLNHVHLKTWHQHTNFVN--RSSKVVQSVKRFIKPQLATQAWCKFHEIVHSYNIVPQQENSFTSIH 170 (399)
Q Consensus 94 l~~lk~~Ln~~-K~~l~~~~~~~w~~ht~~~n--~~~~i~~~vk~~~~~e~~trAw~KL~EId~~f~l~~~~~~~~~vlD 170 (399)
-+..|++||.+ |++++.|.... ..-+| .|+..+..= .....|++||+|||.||+++| ++.++ .+|||
T Consensus 27 g~~wk~~ln~l~k~~f~~y~~~~----i~e~~r~~ar~~l~~~--~~~g~YrSRAAfKL~ei~eK~-~Lk~~---~~VLD 96 (282)
T 3gcz_A 27 GEAWKKQLNKLGKTQFEQYKRSC----ILEVDRTHARDSLENG--IQNGIAVSRGSAKLRWMEERG-YVKPT---GIVVD 96 (282)
T ss_dssp HHHHHHHHHHCCHHHHHHHHTTT----CEEECCHHHHHHHHHT--CCSSBCSSTHHHHHHHHHHTT-SCCCC---EEEEE
T ss_pred HHHHHHHHHhhhHHHHHhhhhhc----eeeccHHHHHHHHhcC--CcCCCEecHHHHHHHHHHHhc-CCCCC---CEEEE
Confidence 45678889888 88887665443 11122 344444431 222789999999999999999 55554 38999
Q ss_pred eccCCChhHHHHHHhhhccCCCCccceeccccCCCcCCCCCCcEEeccccccccCccccCCCc---ccc--CCCChHHHH
Q psy15838 171 LCEAPGAFITSLNHYLKLHHPRMQWDWIANTLNPHYEGNSFDEMISDDRLILGTHRKWYFGPD---NTG--NILVQNFVS 245 (399)
Q Consensus 171 LceaPGgFsqaln~yl~~~~~~~~w~~~a~sLnP~~e~n~~~~vI~dD~~~~~~~~~w~~G~d---~tG--DI~~~~~i~ 245 (399)
||||||||+|++....... ..+|+++.. |. ...+++.-.+|.+ ... |+.
T Consensus 97 LGaAPGGWsQvAa~~~gv~------sV~GvdvG~-------------d~-~~~pi~~~~~g~~ii~~~~~~dv~------ 150 (282)
T 3gcz_A 97 LGCGRGGWSYYAASLKNVK------KVMAFTLGV-------------QG-HEKPIMRTTLGWNLIRFKDKTDVF------ 150 (282)
T ss_dssp ETCTTCHHHHHHHTSTTEE------EEEEECCCC-------------TT-SCCCCCCCBTTGGGEEEECSCCGG------
T ss_pred eCCCCCHHHHHHHHhcCCC------eeeeEEecc-------------Cc-cccccccccCCCceEEeeCCcchh------
Confidence 9999999999754321110 122333310 10 0001110001211 111 211
Q ss_pred HHHHhhhhhhccCCCCCCCCCCCCcccEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHhccCCC--CEEEEeEccCCC
Q psy15838 246 HFKQHIGFLLIHDTSLAPHCTHASHCFLVTADGSFDCQGNPGEQEILVGKLHYREVQIALSLLHNG--GNLVIKIFTIFE 323 (399)
Q Consensus 246 ~i~~~v~~~~~~~~~~~~~~~~~~~vDLV~ADGs~d~sg~~~~qe~~s~~L~~~el~~Al~~Lr~G--G~fVlK~F~~~e 323 (399)
. + ...++|+|+|||+|+ +|++..|+..++.| +.+|..+|++| |+||+|+|+.+.
T Consensus 151 ---~-l---------------~~~~~DvVLSDmApn-sG~~~~D~~rs~~L----L~~A~~~Lk~g~~G~Fv~KvF~pyg 206 (282)
T 3gcz_A 151 ---N-M---------------EVIPGDTLLCDIGES-SPSIAVEEQRTLRV----LNCAKQWLQEGNYTEFCIKVLCPYT 206 (282)
T ss_dssp ---G-S---------------CCCCCSEEEECCCCC-CSCHHHHHHHHHHH----HHHHHHHHHHHCCCEEEEEESCCCS
T ss_pred ---h-c---------------CCCCcCEEEecCccC-CCChHHHHHHHHHH----HHHHHHHcCCCCCCcEEEEEecCCC
Confidence 1 0 245799999999999 99999999988777 89999999999 999999999555
Q ss_pred CCHHHHHHHHHhcCCeeeeecCCCCCCCCceEEEEEeeccCCc
Q psy15838 324 SDTICLMYLLACLFTSVDLFKPATSKEGNSEIYVICRDFHSVC 366 (399)
Q Consensus 324 ~~t~~Ll~lL~~~F~~V~v~KP~aSR~~sSE~YlVc~gf~g~~ 366 (399)
..+..++..|+.+|++|+++|| +||+.|+|+|+||++...+.
T Consensus 207 ~~~~~l~~~lk~~F~~V~~~KP-aSR~~S~E~Y~V~~~r~n~~ 248 (282)
T 3gcz_A 207 PLIMEELSRLQLKHGGGLVRVP-LSRNSTHEMYWVSGTRTDVV 248 (282)
T ss_dssp HHHHHHHHHHHHHHCCEEECCT-TSCTTCCCEEEETTCCCCSH
T ss_pred ccHHHHHHHHHHhcCCEEEEcC-CCcccCcceeEEEecCCCcc
Confidence 6799999999999999999999 99999999999998876554
No 4
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=99.98 E-value=1.5e-32 Score=267.78 Aligned_cols=215 Identities=13% Similarity=0.092 Sum_probs=147.7
Q ss_pred HHHHHHHHHH-hhhcCccchhHHHhhhcccC--chhhHHHHHHhhcchhhhHHHHHHHHHHHHhCCCCCCCCCCceEEEe
Q psy15838 95 QALKEKLNDV-KSNLNHVHLKTWHQHTNFVN--RSSKVVQSVKRFIKPQLATQAWCKFHEIVHSYNIVPQQENSFTSIHL 171 (399)
Q Consensus 95 ~~lk~~Ln~~-K~~l~~~~~~~w~~ht~~~n--~~~~i~~~vk~~~~~e~~trAw~KL~EId~~f~l~~~~~~~~~vlDL 171 (399)
+..|.+||.+ |++|+.|.... ..-+| .|+..+..= +.....|++||+|||.||+++ ++++++ .++|||
T Consensus 18 ~~wk~~Ln~l~k~~f~~y~~~~----i~e~dr~~ar~~l~~~-~~~~g~yrSRaa~KL~ei~ek-~l~~~g---~~vlDL 88 (300)
T 3eld_A 18 EVWKRQLNMLGKQEFERYKVSD----ITEVDRTAARRYLKEG-RTDVGISVSRGAAKIRWLHER-GYLRIT---GRVLDL 88 (300)
T ss_dssp HHHHHHHTTSCHHHHHHHHHTT----CEEECCHHHHHHHHHT-CSSSCCCSSTTHHHHHHHHHH-TSCCCC---EEEEEE
T ss_pred HHHHHHHHhhhHHHHHhhhhhc----cccccHHHHHHHHHcC-CccCCCccchHHHHHHHHHHh-CCCCCC---CEEEEc
Confidence 4467777777 77766554333 11122 344333320 112268999999999999999 999875 499999
Q ss_pred ccCCChhHHHHHHhhhccCCCCccceeccccCCC-cCCCCCCcEEeccccccccCccccCCCcccc-CCCChHHHHHHHH
Q psy15838 172 CEAPGAFITSLNHYLKLHHPRMQWDWIANTLNPH-YEGNSFDEMISDDRLILGTHRKWYFGPDNTG-NILVQNFVSHFKQ 249 (399)
Q Consensus 172 ceaPGgFsqaln~yl~~~~~~~~w~~~a~sLnP~-~e~n~~~~vI~dD~~~~~~~~~w~~G~d~tG-DI~~~~~i~~i~~ 249 (399)
|||||||+|++....... ..+|+++..- .+........+.|+..+ .+| |+..
T Consensus 89 GaaPGgWsqva~~~~gv~------sV~Gvdlg~~~~~~P~~~~~~~~~iv~~-----------~~~~di~~--------- 142 (300)
T 3eld_A 89 GCGRGGWSYYAAAQKEVM------SVKGYTLGIEGHEKPIHMQTLGWNIVKF-----------KDKSNVFT--------- 142 (300)
T ss_dssp TCTTCHHHHHHHTSTTEE------EEEEECCCCTTSCCCCCCCBTTGGGEEE-----------ECSCCTTT---------
T ss_pred CCCCCHHHHHHHHhcCCc------eeeeEEeccccccccccccccCCceEEe-----------ecCceeee---------
Confidence 999999999876532110 1233444210 00000000000011000 011 2211
Q ss_pred hhhhhhccCCCCCCCCCCCCcccEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHhccCCC-CEEEEeEccCCCCCHHH
Q psy15838 250 HIGFLLIHDTSLAPHCTHASHCFLVTADGSFDCQGNPGEQEILVGKLHYREVQIALSLLHNG-GNLVIKIFTIFESDTIC 328 (399)
Q Consensus 250 ~v~~~~~~~~~~~~~~~~~~~vDLV~ADGs~d~sg~~~~qe~~s~~L~~~el~~Al~~Lr~G-G~fVlK~F~~~e~~t~~ 328 (399)
+ ...++|||+|||+|+ +|++..|+..++.| +.+|..+|++| |+||+|+|+.|...+..
T Consensus 143 -l---------------~~~~~DlVlsD~APn-sG~~~~D~~rs~~L----L~~A~~~LkpG~G~FV~KvF~~yG~~~~~ 201 (300)
T 3eld_A 143 -M---------------PTEPSDTLLCDIGES-SSNPLVERDRTMKV----LENFERWKHVNTENFCVKVLAPYHPDVIE 201 (300)
T ss_dssp -S---------------CCCCCSEEEECCCCC-CSSHHHHHHHHHHH----HHHHHHHCCTTCCEEEEEESSTTSHHHHH
T ss_pred -c---------------CCCCcCEEeecCcCC-CCCHHHHHHHHHHH----HHHHHHHhcCCCCcEEEEeccccCccHHH
Confidence 0 135799999999999 99999999988888 89999999999 99999999955577999
Q ss_pred HHHHHHhcCCeeeeecCCCCCCCCceEEEEEeeccCCc
Q psy15838 329 LMYLLACLFTSVDLFKPATSKEGNSEIYVICRDFHSVC 366 (399)
Q Consensus 329 Ll~lL~~~F~~V~v~KP~aSR~~sSE~YlVc~gf~g~~ 366 (399)
++..|+.+|++|.++|| +||+.|+|+|+||.+...+.
T Consensus 202 ll~~lk~~F~~V~~~KP-aSR~~S~E~Y~V~~~r~n~~ 238 (300)
T 3eld_A 202 KLERLQLRFGGGIVRVP-FSRNSTHEMYYISGARNNIT 238 (300)
T ss_dssp HHHHHHHHHCCEEECCT-TSCTTCCCEEEESSCCCCHH
T ss_pred HHHHHHHhCCcEEEEeC-CCCCCChHHeeeccCCCCcc
Confidence 99999999999999999 99999999999998875554
No 5
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=99.97 E-value=3.8e-32 Score=262.90 Aligned_cols=215 Identities=12% Similarity=0.087 Sum_probs=147.6
Q ss_pred HHHHHHHHHHH-hhhcCccchhHHHhhhcccC--chhhHHHHHHhhcchhhhHHHHHHHHHHHHhCCCCCCCCCCceEEE
Q psy15838 94 FQALKEKLNDV-KSNLNHVHLKTWHQHTNFVN--RSSKVVQSVKRFIKPQLATQAWCKFHEIVHSYNIVPQQENSFTSIH 170 (399)
Q Consensus 94 l~~lk~~Ln~~-K~~l~~~~~~~w~~ht~~~n--~~~~i~~~vk~~~~~e~~trAw~KL~EId~~f~l~~~~~~~~~vlD 170 (399)
-+..|++||.+ |++++.|.... ..-+| .|+..+..= +.....|++||||||.||+++ .+++++. +|||
T Consensus 10 g~~wk~~ln~l~k~~f~~y~~~~----i~e~~r~~ar~~l~~~-~~~~~~YrSRaA~KL~ei~ek-~~l~~~~---~VLD 80 (277)
T 3evf_A 10 GEVWKRELNLLDKRQFELYKRTD----IVEVDRDTARRHLAEG-KVDTGVAVSRGTAKLRWFHER-GYVKLEG---RVID 80 (277)
T ss_dssp HHHHHHHHHHSCHHHHHHHHTSS----EEEECCHHHHHHHHTT-CCSSCBCSSTHHHHHHHHHHT-TSSCCCE---EEEE
T ss_pred HHHHHHHHHhhhHHHHHhhhhhc----cccccHHHHHHHHhcC-CccCCCccccHHHHHHHHHHh-CCCCCCC---EEEE
Confidence 45678888888 88887665433 11122 333333320 122257999999999999999 6676643 8999
Q ss_pred eccCCChhHHHHHHhhhccCCCCccceeccccCCCcCCCCCCcEEeccccccccCccccCCC---ccccCCCChHHHHHH
Q psy15838 171 LCEAPGAFITSLNHYLKLHHPRMQWDWIANTLNPHYEGNSFDEMISDDRLILGTHRKWYFGP---DNTGNILVQNFVSHF 247 (399)
Q Consensus 171 LceaPGgFsqaln~yl~~~~~~~~w~~~a~sLnP~~e~n~~~~vI~dD~~~~~~~~~w~~G~---d~tGDI~~~~~i~~i 247 (399)
||||||||+|++....... .+.-.-+|.+| + ..+.+.-.+|. ...+|+..
T Consensus 81 LGaAPGGWSQvAa~~~~~~--~v~g~dVGvDl-~-----------------~~pi~~~~~g~~ii~~~~~~dv------- 133 (277)
T 3evf_A 81 LGCGRGGWCYYAAAQKEVS--GVKGFTLGRDG-H-----------------EKPMNVQSLGWNIITFKDKTDI------- 133 (277)
T ss_dssp ETCTTCHHHHHHHTSTTEE--EEEEECCCCTT-C-----------------CCCCCCCBTTGGGEEEECSCCT-------
T ss_pred ecCCCCHHHHHHHHhcCCC--cceeEEEeccC-c-----------------ccccccCcCCCCeEEEecccee-------
Confidence 9999999999654321100 00001122222 1 11111000111 12333310
Q ss_pred HHhhhhhhccCCCCCCCCCCCCcccEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHhccCCC-CEEEEeEccCCCCCH
Q psy15838 248 KQHIGFLLIHDTSLAPHCTHASHCFLVTADGSFDCQGNPGEQEILVGKLHYREVQIALSLLHNG-GNLVIKIFTIFESDT 326 (399)
Q Consensus 248 ~~~v~~~~~~~~~~~~~~~~~~~vDLV~ADGs~d~sg~~~~qe~~s~~L~~~el~~Al~~Lr~G-G~fVlK~F~~~e~~t 326 (399)
.. + ...++|+|+|||+|+ +|++..|+..++.| +.+|..+|++| |+||+|+|+.+...+
T Consensus 134 ~~-l---------------~~~~~DlVlsD~apn-sG~~~~D~~rs~~L----L~~a~~~LkpG~G~FV~KVf~pyg~~~ 192 (277)
T 3evf_A 134 HR-L---------------EPVKCDTLLCDIGES-SSSSVTEGERTVRV----LDTVEKWLACGVDNFCVKVLAPYMPDV 192 (277)
T ss_dssp TT-S---------------CCCCCSEEEECCCCC-CSCHHHHHHHHHHH----HHHHHHHHTTCCSEEEEEESCTTSHHH
T ss_pred hh-c---------------CCCCccEEEecCccC-cCchHHHHHHHHHH----HHHHHHHhCCCCCeEEEEecCCCCccH
Confidence 00 0 135799999999999 99999999888777 88999999999 999999999555679
Q ss_pred HHHHHHHHhcCCeeeeecCCCCCCCCceEEEEEeeccCCc
Q psy15838 327 ICLMYLLACLFTSVDLFKPATSKEGNSEIYVICRDFHSVC 366 (399)
Q Consensus 327 ~~Ll~lL~~~F~~V~v~KP~aSR~~sSE~YlVc~gf~g~~ 366 (399)
..++..|+.+|++|+++|| +||+.|+|+|+||++...+.
T Consensus 193 ~~l~~~lk~~F~~V~~~KP-aSR~~S~E~Y~V~~~r~n~~ 231 (277)
T 3evf_A 193 LEKLELLQRRFGGTVIRNP-LSRNSTHEMYYVSGARSNVT 231 (277)
T ss_dssp HHHHHHHHHHHCCEEECCT-TSCTTCCCEEEESSCCCCHH
T ss_pred HHHHHHHHHhcCCEEEEeC-CCCCCCCceEEEEecCCCcc
Confidence 9999999999999999999 99999999999998875553
No 6
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.92 E-value=5.5e-25 Score=198.18 Aligned_cols=183 Identities=18% Similarity=0.227 Sum_probs=134.0
Q ss_pred hhhHHHHHHHHHHHHhCCCCCCCCCCceEEEeccCCChhHHHHHHhhhccCCCCccceeccccCCCcCCCCCCcEEeccc
Q psy15838 140 QLATQAWCKFHEIVHSYNIVPQQENSFTSIHLCEAPGAFITSLNHYLKLHHPRMQWDWIANTLNPHYEGNSFDEMISDDR 219 (399)
Q Consensus 140 e~~trAw~KL~EId~~f~l~~~~~~~~~vlDLceaPGgFsqaln~yl~~~~~~~~w~~~a~sLnP~~e~n~~~~vI~dD~ 219 (399)
+|++||++||.||+++|.+++++ .+|||||||||+|+.++...... .....+|+++.|..... ....
T Consensus 1 ~~~~r~~~kl~~~~~~~~~~~~~---~~vLDlGcG~G~~~~~l~~~~~~----~~~~v~gvD~s~~~~~~-~v~~----- 67 (201)
T 2plw_A 1 NYRSRAAYKLIELDNKYLFLKKN---KIILDIGCYPGSWCQVILERTKN----YKNKIIGIDKKIMDPIP-NVYF----- 67 (201)
T ss_dssp -CCSTTHHHHHHHHHHHCCCCTT---EEEEEESCTTCHHHHHHHHHTTT----SCEEEEEEESSCCCCCT-TCEE-----
T ss_pred CcchHHHHHHHHHHHHcCCCCCC---CEEEEeCCCCCHHHHHHHHHcCC----CCceEEEEeCCccCCCC-CceE-----
Confidence 58999999999999999988765 49999999999999987664321 01346777777642110 1111
Q ss_pred cccccCccccCCCccccCCCChH-----------------HHHHHHHhhhhhhccCCCCCCCCCCCCcccEEEecCCCCC
Q psy15838 220 LILGTHRKWYFGPDNTGNILVQN-----------------FVSHFKQHIGFLLIHDTSLAPHCTHASHCFLVTADGSFDC 282 (399)
Q Consensus 220 ~~~~~~~~w~~G~d~tGDI~~~~-----------------~i~~i~~~v~~~~~~~~~~~~~~~~~~~vDLV~ADGs~d~ 282 (399)
.+||+.+.. ....+...+ ....+|+|++|++++.
T Consensus 68 --------------~~~d~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~---------------~~~~fD~v~~~~~~~~ 118 (201)
T 2plw_A 68 --------------IQGEIGKDNMNNIKNINYIDNMNNNSVDYKLKEIL---------------QDKKIDIILSDAAVPC 118 (201)
T ss_dssp --------------EECCTTTTSSCCC-----------CHHHHHHHHHH---------------TTCCEEEEEECCCCCC
T ss_pred --------------EEccccchhhhhhccccccccccchhhHHHHHhhc---------------CCCcccEEEeCCCcCC
Confidence 344443321 222222211 1347999999999999
Q ss_pred CCCCchhHHHHHHHHHHHHHHHHhccCCCCEEEEeEccCCCCCHHHHHHHHHhcCCeeeeecCCCCCCCCceEEEEEeec
Q psy15838 283 QGNPGEQEILVGKLHYREVQIALSLLHNGGNLVIKIFTIFESDTICLMYLLACLFTSVDLFKPATSKEGNSEIYVICRDF 362 (399)
Q Consensus 283 sg~~~~qe~~s~~L~~~el~~Al~~Lr~GG~fVlK~F~~~e~~t~~Ll~lL~~~F~~V~v~KP~aSR~~sSE~YlVc~gf 362 (399)
.|.+..++.....+....+..+..+|+|||.||+++|... ....++..+...|..|+++||.+||+.|+|+|+||++|
T Consensus 119 ~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~--~~~~l~~~l~~~f~~v~~~~~~~~r~~s~e~y~v~~~~ 196 (201)
T 2plw_A 119 IGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVKMYLGS--QTNNLKTYLKGMFQLVHTTKPKASRNESREIYLVCKNF 196 (201)
T ss_dssp CSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECST--THHHHHHHHHTTEEEEEECCCC-----CCEEEEEEEEE
T ss_pred CCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEeCCC--CHHHHHHHHHHHHheEEEECCcccCCcCceEEEEEecC
Confidence 8887777777777888888889999999999999999874 47889999999999999999999999999999999999
Q ss_pred cCCc
Q psy15838 363 HSVC 366 (399)
Q Consensus 363 ~g~~ 366 (399)
+|+.
T Consensus 197 ~~~~ 200 (201)
T 2plw_A 197 LGRK 200 (201)
T ss_dssp CCC-
T ss_pred ccCC
Confidence 9864
No 7
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=99.91 E-value=7.9e-24 Score=200.34 Aligned_cols=201 Identities=15% Similarity=0.156 Sum_probs=140.9
Q ss_pred hhhcCccchhHHHhhhc----ccCc--hhhHHHHHHhhcchhhhHHHHHHHHHHHHhCCCCCCCCCCceEEEeccCCChh
Q psy15838 105 KSNLNHVHLKTWHQHTN----FVNR--SSKVVQSVKRFIKPQLATQAWCKFHEIVHSYNIVPQQENSFTSIHLCEAPGAF 178 (399)
Q Consensus 105 K~~l~~~~~~~w~~ht~----~~n~--~~~i~~~vk~~~~~e~~trAw~KL~EId~~f~l~~~~~~~~~vlDLceaPGgF 178 (399)
|.+||.++.+++.+... -+|+ |+..++ +...+..|+|||+|||.||+++| ++.++ .+|||||||||||
T Consensus 19 K~~LN~l~k~~F~~Yk~~gi~Evdr~~ar~~l~--~g~~~g~yrSRa~~KL~ei~ek~-~l~~g---~~VvDLGaapGGW 92 (267)
T 3p8z_A 19 KKKLNQLSRKEFDLYKKSGITEVDRTEAKEGLK--RGETTHHAVSRGSAKLQWFVERN-MVIPE---GRVIDLGCGRGGW 92 (267)
T ss_dssp HHHHHHSCHHHHHHHHTTTCEEEECHHHHHHHH--TTCCSSCCSSTHHHHHHHHHHTT-SSCCC---EEEEEESCTTSHH
T ss_pred HHHHhhcCHHHHHHHhhcCceEeccHHHHHHHh--cCCcCCCccchHHHHHHHHHHhc-CCCCC---CEEEEcCCCCCcH
Confidence 55556666666643322 1222 222222 12233799999999999999999 66654 3999999999999
Q ss_pred HHHHHHhhhccCCCCccceeccccCCCcCCCCCCcEEeccccccccCccccCCCcccc-CCCChHHHHHHHHhhhhhhcc
Q psy15838 179 ITSLNHYLKLHHPRMQWDWIANTLNPHYEGNSFDEMISDDRLILGTHRKWYFGPDNTG-NILVQNFVSHFKQHIGFLLIH 257 (399)
Q Consensus 179 sqaln~yl~~~~~~~~w~~~a~sLnP~~e~n~~~~vI~dD~~~~~~~~~w~~G~d~tG-DI~~~~~i~~i~~~v~~~~~~ 257 (399)
+|++.. .. ... ..+|.|+.+.... .+. .++++ .|.--...+| |+.. +
T Consensus 93 Sq~~a~----~~-g~~-~V~avdvG~~ghe--~P~-------~~~s~-gwn~v~fk~gvDv~~----------~------ 140 (267)
T 3p8z_A 93 SYYCAG----LK-KVT-EVRGYTKGGPGHE--EPV-------PMSTY-GWNIVKLMSGKDVFY----------L------ 140 (267)
T ss_dssp HHHHHT----ST-TEE-EEEEECCCSTTSC--CCC-------CCCCT-TTTSEEEECSCCGGG----------C------
T ss_pred HHHHHH----hc-CCC-EEEEEecCCCCcc--Ccc-------hhhhc-CcCceEEEeccceee----------c------
Confidence 995433 11 111 4667777543110 000 11121 1321124667 7621 0
Q ss_pred CCCCCCCCCCCCcccEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHhccCCCCEEEEeEccCCCCCHHHHHHHHHhcC
Q psy15838 258 DTSLAPHCTHASHCFLVTADGSFDCQGNPGEQEILVGKLHYREVQIALSLLHNGGNLVIKIFTIFESDTICLMYLLACLF 337 (399)
Q Consensus 258 ~~~~~~~~~~~~~vDLV~ADGs~d~sg~~~~qe~~s~~L~~~el~~Al~~Lr~GG~fVlK~F~~~e~~t~~Ll~lL~~~F 337 (399)
...++|+|+||+++ .++++..+++.+.+ ++.+|...|++ |+|+||+|...++.....+..|...|
T Consensus 141 ---------~~~~~DtllcDIge-Ss~~~~vE~~Rtlr----vLela~~wL~~-~~fc~KVl~py~p~v~e~l~~lq~~f 205 (267)
T 3p8z_A 141 ---------PPEKCDTLLCDIGE-SSPSPTVEESRTIR----VLKMVEPWLKN-NQFCIKVLNPYMPTVIEHLERLQRKH 205 (267)
T ss_dssp ---------CCCCCSEEEECCCC-CCSCHHHHHHHHHH----HHHHHGGGCSS-CEEEEEESCCCSHHHHHHHHHHHHHH
T ss_pred ---------CCccccEEEEecCC-CCCChhhhhhHHHH----HHHHHHHhccc-CCEEEEEccCCChhHHHHHHHHHHHh
Confidence 12569999999999 88999888877655 88899999998 89999999998877889999999999
Q ss_pred CeeeeecCCCCCCCCceEEEEE
Q psy15838 338 TSVDLFKPATSKEGNSEIYVIC 359 (399)
Q Consensus 338 ~~V~v~KP~aSR~~sSE~YlVc 359 (399)
..+.+.||. ||..+.|+|+|.
T Consensus 206 gg~lVR~P~-SRnsThEMY~Vs 226 (267)
T 3p8z_A 206 GGMLVRNPL-SRNSTHEMYWIS 226 (267)
T ss_dssp CCEEECCTT-SCTTCCCEEEES
T ss_pred CCEeEeCCC-CCCCcceEEEEe
Confidence 999999999 999999999995
No 8
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.90 E-value=2e-23 Score=186.87 Aligned_cols=188 Identities=14% Similarity=0.110 Sum_probs=136.0
Q ss_pred hhhHHHHHHHHHHHHhCCCCCCCCCCceEEEeccCCChhHHHHHHhhhcc---CCCCccceeccccCCCcCCCCCCcEEe
Q psy15838 140 QLATQAWCKFHEIVHSYNIVPQQENSFTSIHLCEAPGAFITSLNHYLKLH---HPRMQWDWIANTLNPHYEGNSFDEMIS 216 (399)
Q Consensus 140 e~~trAw~KL~EId~~f~l~~~~~~~~~vlDLceaPGgFsqaln~yl~~~---~~~~~w~~~a~sLnP~~e~n~~~~vI~ 216 (399)
+|++||++||+||++++++++++. +|||||||||+|+.++....... ........+|++++|.
T Consensus 1 ~~~~r~~~kl~~l~~~~~~~~~~~---~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~----------- 66 (196)
T 2nyu_A 1 SYRSRSAFKLLEVNERHQILRPGL---RVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHI----------- 66 (196)
T ss_dssp CCSSTHHHHHHHHHHHHCCCCTTC---EEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCC-----------
T ss_pred CchhHHHHHHHHHHHhcCCCCCCC---EEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhc-----------
Confidence 478999999999999999888754 99999999999999876654210 0000123444544442
Q ss_pred ccccccccCccccCCCcc-ccCCCChHHHHHHHHhhhhhhccCCCCCCCCCCCCcccEEEecCCCCCCCCCchhHHHHHH
Q psy15838 217 DDRLILGTHRKWYFGPDN-TGNILVQNFVSHFKQHIGFLLIHDTSLAPHCTHASHCFLVTADGSFDCQGNPGEQEILVGK 295 (399)
Q Consensus 217 dD~~~~~~~~~w~~G~d~-tGDI~~~~~i~~i~~~v~~~~~~~~~~~~~~~~~~~vDLV~ADGs~d~sg~~~~qe~~s~~ 295 (399)
...++.. .. .||+.+....+.+...+. ..++|+|+||++++++|.+..++.....
T Consensus 67 ------~~~~~~~---~~~~~d~~~~~~~~~~~~~~~---------------~~~fD~V~~~~~~~~~~~~~~~~~~~~~ 122 (196)
T 2nyu_A 67 ------FPLEGAT---FLCPADVTDPRTSQRILEVLP---------------GRRADVILSDMAPNATGFRDLDHDRLIS 122 (196)
T ss_dssp ------CCCTTCE---EECSCCTTSHHHHHHHHHHSG---------------GGCEEEEEECCCCCCCSCHHHHHHHHHH
T ss_pred ------ccCCCCe---EEEeccCCCHHHHHHHHHhcC---------------CCCCcEEEeCCCCCCCCCcccCHHHHHH
Confidence 1111111 25 889988766655554221 2469999999999999988777777777
Q ss_pred HHHHHHHHHHhccCCCCEEEEeEccCCCCCHHHHHHHHHhcCCeeeeecCCCCCCCCceEEEEEeeccCCcc
Q psy15838 296 LHYREVQIALSLLHNGGNLVIKIFTIFESDTICLMYLLACLFTSVDLFKPATSKEGNSEIYVICRDFHSVCS 367 (399)
Q Consensus 296 L~~~el~~Al~~Lr~GG~fVlK~F~~~e~~t~~Ll~lL~~~F~~V~v~KP~aSR~~sSE~YlVc~gf~g~~~ 367 (399)
+....+..+..+|+|||.||+++|... ....++..+...|..|.++||.+||+.++|.|+||.||++...
T Consensus 123 ~~~~~l~~~~~~LkpgG~lv~~~~~~~--~~~~~~~~l~~~f~~v~~~~~~~~~~~~~e~~~v~~g~~~~~~ 192 (196)
T 2nyu_A 123 LCLTLLSVTPDILQPGGTFLCKTWAGS--QSRRLQRRLTEEFQNVRIIKPEASRKESSEVYFLATQYHGRKG 192 (196)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEEECCSG--GGHHHHHHHHHHEEEEEEECCC--------EEEEEEEECCC--
T ss_pred HHHHHHHHHHHHhcCCCEEEEEecCCc--cHHHHHHHHHHHhcceEEECCcccCccCceEEEEeeecCCccc
Confidence 888888999999999999999999874 4688899999999999999999999999999999999998654
No 9
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=99.88 E-value=1.3e-23 Score=204.18 Aligned_cols=175 Identities=15% Similarity=0.141 Sum_probs=127.9
Q ss_pred cCchhhHHHHHHhhcchhhhHHHHHHHHHHHHhCCCCCCCCCCceEEEecc------CCChhHHHHHHhhhccCCCCccc
Q psy15838 123 VNRSSKVVQSVKRFIKPQLATQAWCKFHEIVHSYNIVPQQENSFTSIHLCE------APGAFITSLNHYLKLHHPRMQWD 196 (399)
Q Consensus 123 ~n~~~~i~~~vk~~~~~e~~trAw~KL~EId~~f~l~~~~~~~~~vlDLce------aPGgFsqaln~yl~~~~~~~~w~ 196 (399)
.=|.+-...-+|-. -|-+-+.+..+.-+ ..++|+|||| |||+| ++..+... +-.
T Consensus 81 ~lp~g~~~nv~kyt-----------qlcqyl~~~~~~vp--~gmrVLDLGA~s~kg~APGS~--VLr~~~p~-----g~~ 140 (344)
T 3r24_A 81 VIPKGIMMNVAKYT-----------QLCQYLNTLTLAVP--YNMRVIHFGAGSDKGVAPGTA--VLRQWLPT-----GTL 140 (344)
T ss_dssp TSCTTCCHHHHHHH-----------HHHHHHTTSCCCCC--TTCEEEEESCCCTTSBCHHHH--HHHHHSCT-----TCE
T ss_pred CCCCCcEeeHHHHH-----------HHHHHhccccEeec--CCCEEEeCCCCCCCCCCCcHH--HHHHhCCC-----CcE
Confidence 35777666655421 23344555555544 3369999997 99995 45444221 013
Q ss_pred eeccccCCCcCCCCCCcEEeccccccccCccccCCCccccCCCChHHHHHHHHhhhhhhccCCCCCCCCCCCCcccEEEe
Q psy15838 197 WIANTLNPHYEGNSFDEMISDDRLILGTHRKWYFGPDNTGNILVQNFVSHFKQHIGFLLIHDTSLAPHCTHASHCFLVTA 276 (399)
Q Consensus 197 ~~a~sLnP~~e~n~~~~vI~dD~~~~~~~~~w~~G~d~tGDI~~~~~i~~i~~~v~~~~~~~~~~~~~~~~~~~vDLV~A 276 (399)
.++++|+|+. ... +..++||++.. . ..+++|||+|
T Consensus 141 VVavDL~~~~-----------------sda----~~~IqGD~~~~------~------------------~~~k~DLVIS 175 (344)
T 3r24_A 141 LVDSDLNDFV-----------------SDA----DSTLIGDCATV------H------------------TANKWDLIIS 175 (344)
T ss_dssp EEEEESSCCB-----------------CSS----SEEEESCGGGE------E------------------ESSCEEEEEE
T ss_pred EEEeeCcccc-----------------cCC----CeEEEcccccc------c------------------cCCCCCEEEe
Confidence 4555555543 211 23479995330 0 1367999999
Q ss_pred cCCCCCCCCCchhHHHHHHHHHHHHHHHHhccCCCCEEEEeEccCCCCCHHHHHHHHHhcCCeeeeecCCCCCCCCceEE
Q psy15838 277 DGSFDCQGNPGEQEILVGKLHYREVQIALSLLHNGGNLVIKIFTIFESDTICLMYLLACLFTSVDLFKPATSKEGNSEIY 356 (399)
Q Consensus 277 DGs~d~sg~~~~qe~~s~~L~~~el~~Al~~Lr~GG~fVlK~F~~~e~~t~~Ll~lL~~~F~~V~v~KP~aSR~~sSE~Y 356 (399)
||+|+++|+.+.+...+..|+..++.+|...|++||+||+|+|++.. . ..++.+...|++|+++| .+||+.|+|+|
T Consensus 176 DMAPNtTG~~D~d~~Rs~~L~ElALdfA~~~LkpGGsFvVKVFQGsg--~-~~L~~lrk~F~~VK~fK-~ASRa~SsEvY 251 (344)
T 3r24_A 176 DMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHSW--N-ADLYKLMGHFSWWTAFV-TNVNASSSEAF 251 (344)
T ss_dssp CCCCTTSCSSCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSSC--C-HHHHHHHTTEEEEEEEE-EGGGTTSSCEE
T ss_pred cCCCCcCCccccchhHHHHHHHHHHHHHHHhCcCCCEEEEEEecCCC--H-HHHHHHHhhCCeEEEEC-CCCCCCCeeEE
Confidence 99999999977776667889999999999999999999999999965 3 56776778999999998 59999999999
Q ss_pred EEEeeccCCc
Q psy15838 357 VICRDFHSVC 366 (399)
Q Consensus 357 lVc~gf~g~~ 366 (399)
|||+||++..
T Consensus 252 LVG~gfKg~~ 261 (344)
T 3r24_A 252 LIGANYLGKP 261 (344)
T ss_dssp EEEEEECSSC
T ss_pred EEeeeccCCC
Confidence 9999999974
No 10
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=99.88 E-value=2.2e-22 Score=197.29 Aligned_cols=177 Identities=15% Similarity=0.128 Sum_probs=126.7
Q ss_pred hhhhHHHHHHHHHHHHhCCCCCCCCCCceEEEeccCCChhHHHHHHhhhccCCCCccceeccccCCCcCCCCCCcEEecc
Q psy15838 139 PQLATQAWCKFHEIVHSYNIVPQQENSFTSIHLCEAPGAFITSLNHYLKLHHPRMQWDWIANTLNPHYEGNSFDEMISDD 218 (399)
Q Consensus 139 ~e~~trAw~KL~EId~~f~l~~~~~~~~~vlDLceaPGgFsqaln~yl~~~~~~~~w~~~a~sLnP~~e~n~~~~vI~dD 218 (399)
..|++|++|||.+|+++ .+++++ .+|||||||||+|++++... -..+|+++.+... .+.+ |
T Consensus 61 ~~~~sR~a~KL~~i~~~-~~~~~g---~~VLDlGcG~G~~s~~la~~---------~~V~gvD~~~~~~---~~~~---~ 121 (305)
T 2p41_A 61 HHAVSRGSAKLRWFVER-NLVTPE---GKVVDLGCGRGGWSYYCGGL---------KNVREVKGLTKGG---PGHE---E 121 (305)
T ss_dssp SCCSSTHHHHHHHHHHT-TSSCCC---EEEEEETCTTSHHHHHHHTS---------TTEEEEEEECCCS---TTSC---C
T ss_pred CCccccHHHHHHHHHHc-CCCCCC---CEEEEEcCCCCHHHHHHHhc---------CCEEEEeccccCc---hhHH---H
Confidence 47899999999999999 777654 49999999999999976553 0244555411100 0001 1
Q ss_pred ccccccCccccCCC-cccc-CCCChHHHHHHHHhhhhhhccCCCCCCCCCCCCcccEEEecCCCCCCCCCchhHHHHHHH
Q psy15838 219 RLILGTHRKWYFGP-DNTG-NILVQNFVSHFKQHIGFLLIHDTSLAPHCTHASHCFLVTADGSFDCQGNPGEQEILVGKL 296 (399)
Q Consensus 219 ~~~~~~~~~w~~G~-d~tG-DI~~~~~i~~i~~~v~~~~~~~~~~~~~~~~~~~vDLV~ADGs~d~sg~~~~qe~~s~~L 296 (399)
...+.... +- ++ ..+| |+++. ...+||+|+||++++ +|.+..++..+.
T Consensus 122 ~~~~~~~~-~~-~v~~~~~~D~~~l-------------------------~~~~fD~V~sd~~~~-~g~~~~d~~~~l-- 171 (305)
T 2p41_A 122 PIPMSTYG-WN-LVRLQSGVDVFFI-------------------------PPERCDTLLCDIGES-SPNPTVEAGRTL-- 171 (305)
T ss_dssp CCCCCSTT-GG-GEEEECSCCTTTS-------------------------CCCCCSEEEECCCCC-CSSHHHHHHHHH--
T ss_pred HHHhhhcC-CC-CeEEEeccccccC-------------------------CcCCCCEEEECCccc-cCcchhhHHHHH--
Confidence 11111110 00 11 1455 66531 123699999999998 777766655432
Q ss_pred HHHHHHHHHhccCCCCEEEEeEccCCCCCHHHHHHHHHhcCCeeeeecCCCCCCCCceEEEEEeeccCCcc
Q psy15838 297 HYREVQIALSLLHNGGNLVIKIFTIFESDTICLMYLLACLFTSVDLFKPATSKEGNSEIYVICRDFHSVCS 367 (399)
Q Consensus 297 ~~~el~~Al~~Lr~GG~fVlK~F~~~e~~t~~Ll~lL~~~F~~V~v~KP~aSR~~sSE~YlVc~gf~g~~~ 367 (399)
.++..+..+|+|||.||+|+|....+.+..++..+...|..|.+.|| +||..|+|.|+||.+|+...+
T Consensus 172 --~~L~~~~~~LkpGG~~v~kv~~~~~~~~~~~l~~l~~~f~~v~~~kP-~sR~~s~E~y~v~~~~~~~~~ 239 (305)
T 2p41_A 172 --RVLNLVENWLSNNTQFCVKVLNPYMSSVIEKMEALQRKHGGALVRNP-LSRNSTHEMYWVSNASGNIVS 239 (305)
T ss_dssp --HHHHHHHHHCCTTCEEEEEESCCCSHHHHHHHHHHHHHHCCEEECCT-TSCTTCCCEEEETTCCCCHHH
T ss_pred --HHHHHHHHHhCCCCEEEEEeCCCCCchHHHHHHHHHHHcCCEEEecC-CCCCccHHHHHHHhccCCccc
Confidence 36667789999999999999999776678899999999999999999 999999999999999986653
No 11
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=99.87 E-value=1e-21 Score=191.05 Aligned_cols=205 Identities=15% Similarity=0.204 Sum_probs=142.6
Q ss_pred hhhcCccchhHHHhhhc----ccCc--hhhHHHHHHhhcchhhhHHHHHHHHHHHHhCCCCCCCCCCceEEEeccCCChh
Q psy15838 105 KSNLNHVHLKTWHQHTN----FVNR--SSKVVQSVKRFIKPQLATQAWCKFHEIVHSYNIVPQQENSFTSIHLCEAPGAF 178 (399)
Q Consensus 105 K~~l~~~~~~~w~~ht~----~~n~--~~~i~~~vk~~~~~e~~trAw~KL~EId~~f~l~~~~~~~~~vlDLceaPGgF 178 (399)
|.+||.++.+++.+... -+|+ |+..++. .+.....|+|||+|||.||++++.|. ++ .+|||||||||||
T Consensus 34 K~~LN~l~k~~F~~Yk~~gi~Evdr~~ar~~l~~-g~~~~g~y~SR~~~KL~ei~~~~~l~-~~---~~VlDLGaapGGw 108 (321)
T 3lkz_A 34 KERLNQMTKEEFTRYRKEAIIEVDRSAAKHARKE-GNVTGGHPVSRGTAKLRWLVERRFLE-PV---GKVIDLGCGRGGW 108 (321)
T ss_dssp HHHHTTSCHHHHHHHTTTTCEEECCHHHHHHHHH-TCCSSCCCSSTHHHHHHHHHHTTSCC-CC---EEEEEETCTTCHH
T ss_pred HHHHhccCHHHHHHHhhcCceeechHHHHHHHhc-CcCcCCCccchHHHHHHHHHHhcCCC-CC---CEEEEeCCCCCcH
Confidence 77778888877754433 2233 2222221 02222569999999999999997654 43 2999999999999
Q ss_pred HHHHHHhhhccCCCCccceeccccCCCcCCCCCCcEEeccccccccCccccCCCcccc-CCCChHHHHHHHHhhhhhhcc
Q psy15838 179 ITSLNHYLKLHHPRMQWDWIANTLNPHYEGNSFDEMISDDRLILGTHRKWYFGPDNTG-NILVQNFVSHFKQHIGFLLIH 257 (399)
Q Consensus 179 sqaln~yl~~~~~~~~w~~~a~sLnP~~e~n~~~~vI~dD~~~~~~~~~w~~G~d~tG-DI~~~~~i~~i~~~v~~~~~~ 257 (399)
+|++.. .. ... ..+|.|+.+-.- ..+. .++.+. |.--...+| ||...
T Consensus 109 sq~~~~----~~-gv~-~V~avdvG~~~h--e~P~-------~~~ql~-w~lV~~~~~~Dv~~l---------------- 156 (321)
T 3lkz_A 109 CYYMAT----QK-RVQ-EVRGYTKGGPGH--EEPQ-------LVQSYG-WNIVTMKSGVDVFYR---------------- 156 (321)
T ss_dssp HHHHTT----CT-TEE-EEEEECCCSTTS--CCCC-------CCCBTT-GGGEEEECSCCTTSS----------------
T ss_pred HHHHHh----hc-CCC-EEEEEEcCCCCc--cCcc-------hhhhcC-CcceEEEeccCHhhC----------------
Confidence 994322 11 111 456777643200 0000 011222 221113455 65320
Q ss_pred CCCCCCCCCCCCcccEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHhccCCC-CEEEEeEccCCCCCHHHHHHHHHhc
Q psy15838 258 DTSLAPHCTHASHCFLVTADGSFDCQGNPGEQEILVGKLHYREVQIALSLLHNG-GNLVIKIFTIFESDTICLMYLLACL 336 (399)
Q Consensus 258 ~~~~~~~~~~~~~vDLV~ADGs~d~sg~~~~qe~~s~~L~~~el~~Al~~Lr~G-G~fVlK~F~~~e~~t~~Ll~lL~~~ 336 (399)
...++|+|+||++ ..++++..+++.+.+ +|.+|...|++| |+|+||+|.++.+.....+..|...
T Consensus 157 ---------~~~~~D~ivcDig-eSs~~~~ve~~Rtl~----vLel~~~wL~~~~~~f~~KVl~pY~~~v~e~l~~lq~~ 222 (321)
T 3lkz_A 157 ---------PSECCDTLLCDIG-ESSSSAEVEEHRTIR----VLEMVEDWLHRGPREFCVKVLCPYMPKVIEKMELLQRR 222 (321)
T ss_dssp ---------CCCCCSEEEECCC-CCCSCHHHHHHHHHH----HHHHHHHHHTTCCCEEEEEESCTTSHHHHHHHHHHHHH
T ss_pred ---------CCCCCCEEEEECc-cCCCChhhhhhHHHH----HHHHHHHHhccCCCcEEEEEcCCCChHHHHHHHHHHHH
Confidence 1246999999999 999999888887655 888899999999 9999999999888788999999999
Q ss_pred CCeeeeecCCCCCCCCceEEEEEee
Q psy15838 337 FTSVDLFKPATSKEGNSEIYVICRD 361 (399)
Q Consensus 337 F~~V~v~KP~aSR~~sSE~YlVc~g 361 (399)
|..+.+.||. ||..+.|+|+|.-.
T Consensus 223 fgg~lvr~P~-SRnst~EmY~vsGa 246 (321)
T 3lkz_A 223 YGGGLVRNPL-SRNSTHEMYWVSRA 246 (321)
T ss_dssp HCCEEECCTT-SCTTCCCEEEETTC
T ss_pred hCCEeEeCCC-CCCCcceEEEEecC
Confidence 9999999999 99999999999843
No 12
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=99.87 E-value=7.9e-22 Score=189.77 Aligned_cols=174 Identities=9% Similarity=-0.003 Sum_probs=127.0
Q ss_pred hhhhHHHHHHHHHHHHhCCCCCCCCCCceEEEeccCCChhHHHHHHhhhccCCCCccceeccccCCCcCCCCCCcEEecc
Q psy15838 139 PQLATQAWCKFHEIVHSYNIVPQQENSFTSIHLCEAPGAFITSLNHYLKLHHPRMQWDWIANTLNPHYEGNSFDEMISDD 218 (399)
Q Consensus 139 ~e~~trAw~KL~EId~~f~l~~~~~~~~~vlDLceaPGgFsqaln~yl~~~~~~~~w~~~a~sLnP~~e~n~~~~vI~dD 218 (399)
..|++|+++||.+|+++ .+++++ .+|||||||||+|++++... ...+|+++.|.......
T Consensus 53 ~~~~sR~a~KL~~i~~~-~~~~~g---~~VLDlGcGtG~~s~~la~~---------~~V~gvD~s~m~~~a~~------- 112 (265)
T 2oxt_A 53 GLSVSRGTAKLAWMEER-GYVELT---GRVVDLGCGRGGWSYYAASR---------PHVMDVRAYTLGVGGHE------- 112 (265)
T ss_dssp CBCSSTHHHHHHHHHHH-TSCCCC---EEEEEESCTTSHHHHHHHTS---------TTEEEEEEECCCCSSCC-------
T ss_pred CCccchHHHHHHHHHHc-CCCCCC---CEEEEeCcCCCHHHHHHHHc---------CcEEEEECchhhhhhhh-------
Confidence 46999999999999999 666554 49999999999999976543 24678887764111000
Q ss_pred ccccccCccccCC--C-cc--ccCCCChHHHHHHHHhhhhhhccCCCCCCCCCCCCcccEEEecCCCCCCCCCchhHHHH
Q psy15838 219 RLILGTHRKWYFG--P-DN--TGNILVQNFVSHFKQHIGFLLIHDTSLAPHCTHASHCFLVTADGSFDCQGNPGEQEILV 293 (399)
Q Consensus 219 ~~~~~~~~~w~~G--~-d~--tGDI~~~~~i~~i~~~v~~~~~~~~~~~~~~~~~~~vDLV~ADGs~d~sg~~~~qe~~s 293 (399)
.....-.+| + .. +||+++. ....||+|+||++ +.++++..++..+
T Consensus 113 ----~~~~~~~~~~~v~~~~~~~D~~~l-------------------------~~~~fD~V~sd~~-~~~~~~~~d~~~~ 162 (265)
T 2oxt_A 113 ----VPRITESYGWNIVKFKSRVDIHTL-------------------------PVERTDVIMCDVG-ESSPKWSVESERT 162 (265)
T ss_dssp ----CCCCCCBTTGGGEEEECSCCTTTS-------------------------CCCCCSEEEECCC-CCCSCHHHHHHHH
T ss_pred ----hhhhhhccCCCeEEEecccCHhHC-------------------------CCCCCcEEEEeCc-ccCCccchhHHHH
Confidence 000000011 1 24 7888751 1246999999999 8888877666543
Q ss_pred HHHHHHHHHHHHhccCCCC--EEEEeEccCCCCCHHHHHHHHHhcCCeeeeecCCCCCCCCceEEEEEeeccCCcc
Q psy15838 294 GKLHYREVQIALSLLHNGG--NLVIKIFTIFESDTICLMYLLACLFTSVDLFKPATSKEGNSEIYVICRDFHSVCS 367 (399)
Q Consensus 294 ~~L~~~el~~Al~~Lr~GG--~fVlK~F~~~e~~t~~Ll~lL~~~F~~V~v~KP~aSR~~sSE~YlVc~gf~g~~~ 367 (399)
.. ++..+..+|+||| .||+|+|.........++..+...|..|.+.| .+||..|+|+|+||.++..+..
T Consensus 163 l~----~L~~~~r~LkpGG~~~fv~kv~~~~~~~~~~~l~~l~~~f~~v~~~k-~~sR~~s~E~y~v~~~~~~~~~ 233 (265)
T 2oxt_A 163 IK----ILELLEKWKVKNPSADFVVKVLCPYSVEVMERLSVMQRKWGGGLVRN-PYSRNSTHEMYFTSRAGGNIIG 233 (265)
T ss_dssp HH----HHHHHHHHHHHCTTCEEEEEESCTTSHHHHHHHHHHHHHHCCEEECC-TTSCTTCCCEEEESSCCSCHHH
T ss_pred HH----HHHHHHHHhccCCCeEEEEEeCCCCChhHHHHHHHHHHHcCCEEEEE-ecccCCCccEEEEecCCCCcch
Confidence 22 6677888999999 99999999443333488889999999999999 7899999999999987765554
No 13
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=99.82 E-value=6.3e-20 Score=177.58 Aligned_cols=173 Identities=10% Similarity=0.020 Sum_probs=120.9
Q ss_pred hhhhHHHHHHHHHHHHhCCCCCCCCCCceEEEeccCCChhHHHHHHhhhccCCCCccceeccccCCCcCCCCCCcEEecc
Q psy15838 139 PQLATQAWCKFHEIVHSYNIVPQQENSFTSIHLCEAPGAFITSLNHYLKLHHPRMQWDWIANTLNPHYEGNSFDEMISDD 218 (399)
Q Consensus 139 ~e~~trAw~KL~EId~~f~l~~~~~~~~~vlDLceaPGgFsqaln~yl~~~~~~~~w~~~a~sLnP~~e~n~~~~vI~dD 218 (399)
..|++|+++||.+|+++ .+++++ .+|||||||||+|++++... -..+|+++.|.......
T Consensus 61 ~~~~sR~a~KL~~i~~~-~~~~~g---~~VLDlGcGtG~~s~~la~~---------~~V~gVD~s~m~~~a~~------- 120 (276)
T 2wa2_A 61 GHAVSRGTAKLAWIDER-GGVELK---GTVVDLGCGRGSWSYYAASQ---------PNVREVKAYTLGTSGHE------- 120 (276)
T ss_dssp ----CHHHHHHHHHHHT-TSCCCC---EEEEEESCTTCHHHHHHHTS---------TTEEEEEEECCCCTTSC-------
T ss_pred CCcCchHHHHHHHHHHc-CCCCCC---CEEEEeccCCCHHHHHHHHc---------CCEEEEECchhhhhhhh-------
Confidence 46899999999999999 555544 49999999999999976543 14677877664110000
Q ss_pred ccccccCccccCC--C-cc--ccCCCChHHHHHHHHhhhhhhccCCCCCCCCCCCCcccEEEecCCCCCCCCCchhHHHH
Q psy15838 219 RLILGTHRKWYFG--P-DN--TGNILVQNFVSHFKQHIGFLLIHDTSLAPHCTHASHCFLVTADGSFDCQGNPGEQEILV 293 (399)
Q Consensus 219 ~~~~~~~~~w~~G--~-d~--tGDI~~~~~i~~i~~~v~~~~~~~~~~~~~~~~~~~vDLV~ADGs~d~sg~~~~qe~~s 293 (399)
.......+| + .. +||+++ + ....||+|+||++ ...+++..++..+
T Consensus 121 ----~~~~~~~~~~~v~~~~~~~D~~~----------l---------------~~~~fD~Vvsd~~-~~~~~~~~d~~~~ 170 (276)
T 2wa2_A 121 ----KPRLVETFGWNLITFKSKVDVTK----------M---------------EPFQADTVLCDIG-ESNPTAAVEASRT 170 (276)
T ss_dssp ----CCCCCCCTTGGGEEEECSCCGGG----------C---------------CCCCCSEEEECCC-CCCSCHHHHHHHH
T ss_pred ----chhhhhhcCCCeEEEeccCcHhh----------C---------------CCCCcCEEEECCC-cCCCchhhhHHHH
Confidence 000000011 1 14 677754 1 1246999999999 8888876665543
Q ss_pred HHHHHHHHHHHHhccCCCC--EEEEeEccCCCCCHHHHHHHHHhcCCeeeeecCCCCCCCCceEEEEEeeccCCc
Q psy15838 294 GKLHYREVQIALSLLHNGG--NLVIKIFTIFESDTICLMYLLACLFTSVDLFKPATSKEGNSEIYVICRDFHSVC 366 (399)
Q Consensus 294 ~~L~~~el~~Al~~Lr~GG--~fVlK~F~~~e~~t~~Ll~lL~~~F~~V~v~KP~aSR~~sSE~YlVc~gf~g~~ 366 (399)
.. .+..+..+|+||| .||+|+|....+....++..+...|..|.++ |.+||..|+|+|+||.++....
T Consensus 171 l~----~L~~~~r~LkpGG~~~~v~~~~~~~~~~~~~~l~~l~~~f~~v~v~-P~~sR~~s~E~y~v~~~~~~~~ 240 (276)
T 2wa2_A 171 LT----VLNVISRWLEYNQGCGFCVKVLNPYSCDVLEALMKMQARFGGGLIR-VPLSRNSTHEMYFVSGIKNNIM 240 (276)
T ss_dssp HH----HHHHHHHHHHHSTTCEEEEEESCCCSHHHHHHHHHHHHHHCCEEEC-CTTSCTTCCCEEEESSCCCCHH
T ss_pred HH----HHHHHHHHhccCCCcEEEEEeCCCCchhHHHHHHHHHHHcCCEEEE-cCCCCCcchheEEecccCCCcc
Confidence 22 5667788999999 9999999944322347888899999999999 9999999999999997765544
No 14
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.78 E-value=1.5e-17 Score=143.53 Aligned_cols=180 Identities=21% Similarity=0.238 Sum_probs=140.3
Q ss_pred hhhHHHHHHHHHHHHhCCCCCCCCCCceEEEeccCCChhHHHHHHhhhccCCCCccceeccccCCCcCCCCCCcEEeccc
Q psy15838 140 QLATQAWCKFHEIVHSYNIVPQQENSFTSIHLCEAPGAFITSLNHYLKLHHPRMQWDWIANTLNPHYEGNSFDEMISDDR 219 (399)
Q Consensus 140 e~~trAw~KL~EId~~f~l~~~~~~~~~vlDLceaPGgFsqaln~yl~~~~~~~~w~~~a~sLnP~~e~n~~~~vI~dD~ 219 (399)
+|++|+++|+.++.+.+..+.++. ++||+|||+|+++.++...+.. ..+.++++++|..+.
T Consensus 1 ~y~~r~~~~l~~~~~~~~~~~~~~---~vLd~G~G~G~~~~~l~~~~~~-----~~~v~~~D~~~~~~~----------- 61 (180)
T 1ej0_A 1 GLRSRAWFKLDEIQQSDKLFKPGM---TVVDLGAAPGGWSQYVVTQIGG-----KGRIIACDLLPMDPI----------- 61 (180)
T ss_dssp CCSCHHHHHHHHHHHHHCCCCTTC---EEEEESCTTCHHHHHHHHHHCT-----TCEEEEEESSCCCCC-----------
T ss_pred CcchhHHHHHHHHHHHhCCCCCCC---eEEEeCCCCCHHHHHHHHHhCC-----CCeEEEEECcccccc-----------
Confidence 478999999999999998776654 9999999999999977664311 134667777662110
Q ss_pred cccccCccccCCCccccCCCChHHHHHHHHhhhhhhccCCCCCCCCCCCCcccEEEecCCCCCCCCCchhHHHHHHHHHH
Q psy15838 220 LILGTHRKWYFGPDNTGNILVQNFVSHFKQHIGFLLIHDTSLAPHCTHASHCFLVTADGSFDCQGNPGEQEILVGKLHYR 299 (399)
Q Consensus 220 ~~~~~~~~w~~G~d~tGDI~~~~~i~~i~~~v~~~~~~~~~~~~~~~~~~~vDLV~ADGs~d~sg~~~~qe~~s~~L~~~ 299 (399)
++.. ...+|+.+....+.+...+ ..+.+|+|++|+.....+.+..++.....+...
T Consensus 62 ------~~~~---~~~~d~~~~~~~~~~~~~~---------------~~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~~~ 117 (180)
T 1ej0_A 62 ------VGVD---FLQGDFRDELVMKALLERV---------------GDSKVQVVMSDMAPNMSGTPAVDIPRAMYLVEL 117 (180)
T ss_dssp ------TTEE---EEESCTTSHHHHHHHHHHH---------------TTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHH
T ss_pred ------CcEE---EEEcccccchhhhhhhccC---------------CCCceeEEEECCCccccCCCccchHHHHHHHHH
Confidence 1000 2678998876655554422 135799999999998888877776666667778
Q ss_pred HHHHHHhccCCCCEEEEeEccCCCCCHHHHHHHHHhcCCeeeeecCCCCCCCCceEEEEEeeccC
Q psy15838 300 EVQIALSLLHNGGNLVIKIFTIFESDTICLMYLLACLFTSVDLFKPATSKEGNSEIYVICRDFHS 364 (399)
Q Consensus 300 el~~Al~~Lr~GG~fVlK~F~~~e~~t~~Ll~lL~~~F~~V~v~KP~aSR~~sSE~YlVc~gf~g 364 (399)
.+..+..+|++||.+|+..+... ....++..+...|+.+.+++|.++|..+.|.|+||++|+.
T Consensus 118 ~l~~~~~~L~~gG~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (180)
T 1ej0_A 118 ALEMCRDVLAPGGSFVVKVFQGE--GFDEYLREIRSLFTKVKVRKPDSSRARSREVYIVATGRKP 180 (180)
T ss_dssp HHHHHHHHEEEEEEEEEEEESST--THHHHHHHHHHHEEEEEEECCTTSCTTCCEEEEEEEEECC
T ss_pred HHHHHHHHcCCCcEEEEEEecCC--cHHHHHHHHHHhhhhEEeecCCcccccCceEEEEEccCCC
Confidence 88888999999999999999874 4788888999999999999999999999999999999973
No 15
>2hwk_A Helicase NSP2; rossman fold, alpha/beta/alpha, multi-domain, hydrolase; 2.45A {Venezuelan equine encephalitis virus}
Probab=99.70 E-value=2e-17 Score=159.62 Aligned_cols=94 Identities=14% Similarity=0.133 Sum_probs=87.4
Q ss_pred CcccEEEecCCCCCCCCC-c--hhHHHHHHHHHHHHHHHHhccCCCCEEEEeEccCCCCCHHHHHHHHHhcCCeeeeecC
Q psy15838 269 SHCFLVTADGSFDCQGNP-G--EQEILVGKLHYREVQIALSLLHNGGNLVIKIFTIFESDTICLMYLLACLFTSVDLFKP 345 (399)
Q Consensus 269 ~~vDLV~ADGs~d~sg~~-~--~qe~~s~~L~~~el~~Al~~Lr~GG~fVlK~F~~~e~~t~~Ll~lL~~~F~~V~v~KP 345 (399)
+++|||++||+++.+|.+ . .||.+.+.| ++.+|+.+|+|||+||+|+|++-+..+..|+..|.+.|++|+++||
T Consensus 205 ~k~DvV~SDMApn~sGh~yqQC~DHarii~L---al~fA~~vLkPGGtfV~KvyggaDr~se~lv~~LaR~F~~Vr~vKP 281 (320)
T 2hwk_A 205 PKYDIIFVNVRTPYKYHHYQQCEDHAIKLSM---LTKKACLHLNPGGTCVSIGYGYADRASESIIGAIARQFKFSRVCKP 281 (320)
T ss_dssp CCEEEEEEECCCCCCSCHHHHHHHHHHHHHH---THHHHGGGEEEEEEEEEEECCCCSHHHHHHHHHHHTTEEEEEEECC
T ss_pred CcCCEEEEcCCCCCCCccccccchHHHHHHH---HHHHHHHhcCCCceEEEEEecCCcccHHHHHHHHHHhcceeeeeCC
Confidence 469999999999999999 7 788877777 9999999999999999999999744689999999999999999999
Q ss_pred CCCCCCCceEEEEEeeccCCc
Q psy15838 346 ATSKEGNSEIYVICRDFHSVC 366 (399)
Q Consensus 346 ~aSR~~sSE~YlVc~gf~g~~ 366 (399)
.+||+ |+|+|+|++||++..
T Consensus 282 ~ASR~-StEvf~La~gf~g~~ 301 (320)
T 2hwk_A 282 KSSLE-ETEVLFVFIGYDRKA 301 (320)
T ss_dssp TTCCS-TTCEEEEEEEECCCC
T ss_pred CCccc-cceEEEEEEeecCCc
Confidence 99999 999999999999976
No 16
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=99.32 E-value=3.3e-12 Score=124.66 Aligned_cols=92 Identities=13% Similarity=0.058 Sum_probs=74.4
Q ss_pred CcccEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHhccCCCCEEEEeEccCCCCCHHHHHHHHHhc-CCeeeeecCCC
Q psy15838 269 SHCFLVTADGSFDCQGNPGEQEILVGKLHYREVQIALSLLHNGGNLVIKIFTIFESDTICLMYLLACL-FTSVDLFKPAT 347 (399)
Q Consensus 269 ~~vDLV~ADGs~d~sg~~~~qe~~s~~L~~~el~~Al~~Lr~GG~fVlK~F~~~e~~t~~Ll~lL~~~-F~~V~v~KP~a 347 (399)
..||+|+||+.++.+|....++.....+....+..|.++|+|||.||+|+|.... ...++.+|... |..|.+. +
T Consensus 122 ~~fD~Vvsn~~~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~~~~~--~~~l~~~l~~~GF~~v~~~---a 196 (290)
T 2xyq_A 122 NKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHSW--NADLYKLMGHFSWWTAFVT---N 196 (290)
T ss_dssp SCEEEEEECCCCCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSSC--CHHHHHHHTTEEEEEEEEE---G
T ss_pred CcccEEEEcCCccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEEeccCC--HHHHHHHHHHcCCcEEEEE---E
Confidence 4699999999988776554444333345567788899999999999999999854 57899999998 9998888 8
Q ss_pred CCCCCceEEEEEeeccCC
Q psy15838 348 SKEGNSEIYVICRDFHSV 365 (399)
Q Consensus 348 SR~~sSE~YlVc~gf~g~ 365 (399)
||..++|.|+||++|++.
T Consensus 197 sr~~s~e~~lv~~~~~~~ 214 (290)
T 2xyq_A 197 VNASSSEAFLIGANYLGK 214 (290)
T ss_dssp GGTTSSCEEEEEEEECSS
T ss_pred cCCCchheEEecCCccCC
Confidence 999999999999999976
No 17
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=99.18 E-value=2.8e-11 Score=121.75 Aligned_cols=45 Identities=16% Similarity=0.286 Sum_probs=36.7
Q ss_pred cchhhhHHHHHHHHHHHHhCCC-------CCCCCCCceEEEeccCCChhHHHHHH
Q psy15838 137 IKPQLATQAWCKFHEIVHSYNI-------VPQQENSFTSIHLCEAPGAFITSLNH 184 (399)
Q Consensus 137 ~~~e~~trAw~KL~EId~~f~l-------~~~~~~~~~vlDLceaPGgFsqaln~ 184 (399)
...+..|||+|||.|+...|.. +.++ +++||||||||||++++..
T Consensus 180 ~~~~~pSRa~lKL~Ea~~~F~~~~~~~~~l~~G---~~vlDLGAaPGGWT~~l~~ 231 (375)
T 4auk_A 180 FPADAPSRSTLKLEEAFHVFIPADEWDERLANG---MWAVDLGACPGGWTYQLVK 231 (375)
T ss_dssp CCTTSSCTTHHHHHHHHHHHSCGGGHHHHSCTT---CEEEEETCTTCHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHhccchhhhhccCCCC---CEEEEeCcCCCHHHHHHHH
Confidence 4567889999999999998843 3333 5999999999999997654
No 18
>3trk_A Nonstructural polyprotein; hydrolase; 2.40A {Chikungunya virus}
Probab=98.15 E-value=5.6e-06 Score=79.52 Aligned_cols=95 Identities=18% Similarity=0.205 Sum_probs=77.3
Q ss_pred CCcccEEEecCCCCCCCCCc---hhHHHHHHHHHHHHHHHHhccCCCCEEEEeEccCCCCCHHHHHHHHHhcCCeeeeec
Q psy15838 268 ASHCFLVTADGSFDCQGNPG---EQEILVGKLHYREVQIALSLLHNGGNLVIKIFTIFESDTICLMYLLACLFTSVDLFK 344 (399)
Q Consensus 268 ~~~vDLV~ADGs~d~sg~~~---~qe~~s~~L~~~el~~Al~~Lr~GG~fVlK~F~~~e~~t~~Ll~lL~~~F~~V~v~K 344 (399)
.+++|||..++.-..-...- +||++- +....--|+..|+|||++|+|.|..-+..+..++..|.+-|..+.+.|
T Consensus 209 ~grYDlVfvNv~TpyR~HHYQQCeDHA~~---l~mL~~~al~~L~pGGtlv~~aYGyADR~SE~vV~alARkF~~~rv~~ 285 (324)
T 3trk_A 209 LGRYDLVVINIHTPFRIHHYQQCVDHAMK---LQMLGGDSLRLLKPGGSLLIRAYGYADRTSERVICVLGRKFRSSRALK 285 (324)
T ss_dssp GCCEEEEEEECCCCCCSSHHHHHHHHHHH---HHHHHHHGGGGEEEEEEEEEEECCCCSHHHHHHHHHHHTTEEEEEEEC
T ss_pred CCceeEEEEecCCccccchHHHHHHHHHH---HHHHHHHHHhhcCCCceEEEEeecccccchHHHHHHHHhhheeeeeec
Confidence 47899999999876654332 244433 333445689999999999999999988889999999999999999999
Q ss_pred CCCCCCCCceEEEEEeeccCCc
Q psy15838 345 PATSKEGNSEIYVICRDFHSVC 366 (399)
Q Consensus 345 P~aSR~~sSE~YlVc~gf~g~~ 366 (399)
|.+.-+ |.|+++|..+|.+..
T Consensus 286 P~cv~s-nTEv~~vF~~~Dng~ 306 (324)
T 3trk_A 286 PPCVTS-NTEMFFLFSNFDNGR 306 (324)
T ss_dssp CTTCCB-TTCEEEEEEEECCCC
T ss_pred Cccccc-cceEEEEEEeccCCc
Confidence 977665 999999999998744
No 19
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=98.07 E-value=6.4e-06 Score=77.61 Aligned_cols=150 Identities=11% Similarity=0.085 Sum_probs=76.0
Q ss_pred hHHHHHHHHHHHHhCCCCCCCCCCceEEEeccCCChhHHHHHHhhhccCCCCccceeccccCCCcCCCCCCcEEeccccc
Q psy15838 142 ATQAWCKFHEIVHSYNIVPQQENSFTSIHLCEAPGAFITSLNHYLKLHHPRMQWDWIANTLNPHYEGNSFDEMISDDRLI 221 (399)
Q Consensus 142 ~trAw~KL~EId~~f~l~~~~~~~~~vlDLceaPGgFsqaln~yl~~~~~~~~w~~~a~sLnP~~e~n~~~~vI~dD~~~ 221 (399)
+++-+.++.+.++.+.+-+. .+|||||||||+|++.+...+... -..+|+++.|..- ..++. .
T Consensus 58 ~skla~~ll~~l~~~~l~~g----~~VLDlG~GtG~~t~~la~~v~~~-----G~V~avD~s~~~l----~~l~~----~ 120 (232)
T 3id6_C 58 RSKLAGAILKGLKTNPIRKG----TKVLYLGAASGTTISHVSDIIELN-----GKAYGVEFSPRVV----RELLL----V 120 (232)
T ss_dssp TCHHHHHHHTTCSCCSCCTT----CEEEEETCTTSHHHHHHHHHHTTT-----SEEEEEECCHHHH----HHHHH----H
T ss_pred HHHHHHHHHhhhhhcCCCCC----CEEEEEeecCCHHHHHHHHHhCCC-----CEEEEEECcHHHH----HHHHH----H
Confidence 44545555555544444443 499999999999999877655321 1244554433100 00000 0
Q ss_pred cccCccccCCCccccCCCChHHHHHHHHhhhhhhccCCCCCCCCCCCCcccEEEecCCCCCCCCCchhHHHHHHHHHHHH
Q psy15838 222 LGTHRKWYFGPDNTGNILVQNFVSHFKQHIGFLLIHDTSLAPHCTHASHCFLVTADGSFDCQGNPGEQEILVGKLHYREV 301 (399)
Q Consensus 222 ~~~~~~w~~G~d~tGDI~~~~~i~~i~~~v~~~~~~~~~~~~~~~~~~~vDLV~ADGs~d~sg~~~~qe~~s~~L~~~el 301 (399)
.....+.. ...||++++..... ....+|+|++|++. ++ |..+ . .
T Consensus 121 a~~r~nv~---~i~~Da~~~~~~~~--------------------~~~~~D~I~~d~a~-----~~-~~~i----l---~ 164 (232)
T 3id6_C 121 AQRRPNIF---PLLADARFPQSYKS--------------------VVENVDVLYVDIAQ-----PD-QTDI----A---I 164 (232)
T ss_dssp HHHCTTEE---EEECCTTCGGGTTT--------------------TCCCEEEEEECCCC-----TT-HHHH----H---H
T ss_pred hhhcCCeE---EEEcccccchhhhc--------------------cccceEEEEecCCC-----hh-HHHH----H---H
Confidence 00001000 25677765422110 12479999999875 12 2111 1 1
Q ss_pred HHHHhccCCCCEEEEeEccCC-------CCCHHHHHHHHHh-cCCeeeeec
Q psy15838 302 QIALSLLHNGGNLVIKIFTIF-------ESDTICLMYLLAC-LFTSVDLFK 344 (399)
Q Consensus 302 ~~Al~~Lr~GG~fVlK~F~~~-------e~~t~~Ll~lL~~-~F~~V~v~K 344 (399)
..+...|+|||.||+-+.... +..+......|.. -|+-+....
T Consensus 165 ~~~~~~LkpGG~lvisik~~~~d~t~~~~e~~~~~~~~L~~~gf~~~~~~~ 215 (232)
T 3id6_C 165 YNAKFFLKVNGDMLLVIKARSIDVTKDPKEIYKTEVEKLENSNFETIQIIN 215 (232)
T ss_dssp HHHHHHEEEEEEEEEEEC-------CCSSSSTTHHHHHHHHTTEEEEEEEE
T ss_pred HHHHHhCCCCeEEEEEEccCCcccCCCHHHHHHHHHHHHHHCCCEEEEEec
Confidence 234458999999999875543 1123445555554 366555443
No 20
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=97.95 E-value=1.5e-05 Score=77.62 Aligned_cols=43 Identities=12% Similarity=0.290 Sum_probs=37.1
Q ss_pred hhhhHHHHHHHHHHHHhCCCCCCCCCCceEEEeccCCChhHHHHHH
Q psy15838 139 PQLATQAWCKFHEIVHSYNIVPQQENSFTSIHLCEAPGAFITSLNH 184 (399)
Q Consensus 139 ~e~~trAw~KL~EId~~f~l~~~~~~~~~vlDLceaPGgFsqaln~ 184 (399)
..|++|+.+||.++++.|.+-..+ .++||+|||+|+|+.++..
T Consensus 63 ~~yvsrg~~Kl~~~l~~~~~~~~g---~~vLDiGcGTG~~t~~L~~ 105 (291)
T 3hp7_A 63 LRYVSRGGLKLEKALAVFNLSVED---MITIDIGASTGGFTDVMLQ 105 (291)
T ss_dssp CCSSSTTHHHHHHHHHHTTCCCTT---CEEEEETCTTSHHHHHHHH
T ss_pred cccccchHHHHHHHHHhcCCCccc---cEEEecCCCccHHHHHHHh
Confidence 369999999999999999876554 3999999999999986644
No 21
>4gua_A Non-structural polyprotein; viral precursor polyprotein, protease, zinc-binding, hydrola; HET: MES; 2.85A {Sindbis virus}
Probab=97.72 E-value=7.6e-05 Score=78.07 Aligned_cols=93 Identities=22% Similarity=0.267 Sum_probs=75.4
Q ss_pred CcccEEEecCCCCCCCCCch---hHHHHHHHHHHHHHHHHhccCCCCEEEEeEccCCCCCHHHHHHHHHhcCCeeeeecC
Q psy15838 269 SHCFLVTADGSFDCQGNPGE---QEILVGKLHYREVQIALSLLHNGGNLVIKIFTIFESDTICLMYLLACLFTSVDLFKP 345 (399)
Q Consensus 269 ~~vDLV~ADGs~d~sg~~~~---qe~~s~~L~~~el~~Al~~Lr~GG~fVlK~F~~~e~~t~~Ll~lL~~~F~~V~v~KP 345 (399)
+++|||..|..-......-. ||++- +....--|+..|+|||++|+|.|.--+..+..++..|.+-|..+.+.||
T Consensus 220 ~ryDlvfvn~~t~yr~HHyqQCeDHa~~---l~ml~~~al~~l~pGGt~v~~~YGyADr~sE~vv~alaRkF~~~rv~~p 296 (670)
T 4gua_A 220 ARYDLVFINIGTKYRNHHFQQCEDHAAT---LKTLSRSALNCLNPGGTLVVKSYGYADRNSEDVVTALARKFVRVSAARP 296 (670)
T ss_dssp CCEEEEEECCCCCCCSCHHHHHHHHHHH---HHHHHHHHHHTEEEEEEEEEEESCCCSHHHHHHHHHHHHTEEEEEEECC
T ss_pred CcccEEEEecCCCcccchHHHHHHHHHH---HHHHhHHHHhhcCCCceEEEEEeeccccchHHHHHHHHhheeeeeeeCC
Confidence 58999999998776544332 44433 3334456889999999999999999888899999999999999999999
Q ss_pred CCCCCCCceEEEEEeeccCC
Q psy15838 346 ATSKEGNSEIYVICRDFHSV 365 (399)
Q Consensus 346 ~aSR~~sSE~YlVc~gf~g~ 365 (399)
.++.+ |.|+++|..+|-..
T Consensus 297 ~~~~s-nTEv~~~f~~~Dn~ 315 (670)
T 4gua_A 297 DCVSS-NTEMYLIFRQLDNS 315 (670)
T ss_dssp TTCSB-TTCEEEEEEEECCC
T ss_pred Ccccc-CceEEEEEEecCCC
Confidence 76654 59999999999853
No 22
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=97.72 E-value=0.00027 Score=65.94 Aligned_cols=96 Identities=10% Similarity=0.079 Sum_probs=60.0
Q ss_pred CCcccEEEecCCCCCC---CCCchhHHHH------HHHHHHHHHHHHhccCCCCEEEEeEccCCCCCHHHHHHHHHhcCC
Q psy15838 268 ASHCFLVTADGSFDCQ---GNPGEQEILV------GKLHYREVQIALSLLHNGGNLVIKIFTIFESDTICLMYLLACLFT 338 (399)
Q Consensus 268 ~~~vDLV~ADGs~d~s---g~~~~qe~~s------~~L~~~el~~Al~~Lr~GG~fVlK~F~~~e~~t~~Ll~lL~~~F~ 338 (399)
...+|+|++|.-.... +..+.+.... .......+..+..+|++||.|++ ++.. .....++..+...--
T Consensus 117 ~~~fD~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~-~~~~--~~~~~~~~~l~~~~~ 193 (259)
T 3lpm_A 117 KERADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANF-VHRP--ERLLDIIDIMRKYRL 193 (259)
T ss_dssp TTCEEEEEECCCC-----------------------HHHHHHHHHHHHHEEEEEEEEE-EECT--TTHHHHHHHHHHTTE
T ss_pred cCCccEEEECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEE-EEcH--HHHHHHHHHHHHCCC
Confidence 3579999998554322 2222111110 11233556778899999999999 4444 346778888887666
Q ss_pred eeeeecCCCCCCCCceEEEEEeeccCCc
Q psy15838 339 SVDLFKPATSKEGNSEIYVICRDFHSVC 366 (399)
Q Consensus 339 ~V~v~KP~aSR~~sSE~YlVc~gf~g~~ 366 (399)
.+...+|..+|+.....+++....++..
T Consensus 194 ~~~~~~~v~~~~~~~~~~~l~~~~k~~~ 221 (259)
T 3lpm_A 194 EPKRIQFVHPRSDREANTVLVEGIKDGK 221 (259)
T ss_dssp EEEEEEEEESSTTSCCSEEEEEEEETCC
T ss_pred ceEEEEEeecCCCCCcEEEEEEEEeCCC
Confidence 6777777778888877777777776543
No 23
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=97.67 E-value=0.00015 Score=68.22 Aligned_cols=166 Identities=9% Similarity=0.056 Sum_probs=87.7
Q ss_pred ceEEEeccCCChhHHHHHHhhhccCCCCccceeccccCCCcCCCCCCcEEecccccc---ccCc-cccCCCccccCCCCh
Q psy15838 166 FTSIHLCEAPGAFITSLNHYLKLHHPRMQWDWIANTLNPHYEGNSFDEMISDDRLIL---GTHR-KWYFGPDNTGNILVQ 241 (399)
Q Consensus 166 ~~vlDLceaPGgFsqaln~yl~~~~~~~~w~~~a~sLnP~~e~n~~~~vI~dD~~~~---~~~~-~w~~G~d~tGDI~~~ 241 (399)
.++||||||+|.++..+..+.. ....+|++++|..-. .+...... .... +.. ...||+.+.
T Consensus 38 ~~VLDlG~G~G~~~l~la~~~~------~~~v~gvDi~~~~~~------~a~~n~~~~~~~~l~~~v~---~~~~D~~~~ 102 (260)
T 2ozv_A 38 CRIADLGAGAGAAGMAVAARLE------KAEVTLYERSQEMAE------FARRSLELPDNAAFSARIE---VLEADVTLR 102 (260)
T ss_dssp EEEEECCSSSSHHHHHHHHHCT------TEEEEEEESSHHHHH------HHHHHTTSGGGTTTGGGEE---EEECCTTCC
T ss_pred CEEEEeCChHhHHHHHHHHhCC------CCeEEEEECCHHHHH------HHHHHHHhhhhCCCcceEE---EEeCCHHHH
Confidence 4999999999999887655431 134566666542100 00000000 0000 000 257888764
Q ss_pred HHHHHHHHhhhhhhccCCCCCCCCCCCCcccEEEecCCCCCC-CCCchhHHHHHHH------HHHHHHHHHhccCCCCEE
Q psy15838 242 NFVSHFKQHIGFLLIHDTSLAPHCTHASHCFLVTADGSFDCQ-GNPGEQEILVGKL------HYREVQIALSLLHNGGNL 314 (399)
Q Consensus 242 ~~i~~i~~~v~~~~~~~~~~~~~~~~~~~vDLV~ADGs~d~s-g~~~~qe~~s~~L------~~~el~~Al~~Lr~GG~f 314 (399)
.. +.....+ ....+|+|++|--.... +....++.....+ ....+..+..+|++||.|
T Consensus 103 ~~-~~~~~~~---------------~~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l 166 (260)
T 2ozv_A 103 AK-ARVEAGL---------------PDEHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQL 166 (260)
T ss_dssp HH-HHHHTTC---------------CTTCEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEE
T ss_pred hh-hhhhhcc---------------CCCCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEE
Confidence 11 0111100 13579999999443322 1111111111111 234466778999999999
Q ss_pred EEeEccCCCCCHHHHHHHHHhcCCeeeeecCCCCCCCCceEEEEEeeccCC
Q psy15838 315 VIKIFTIFESDTICLMYLLACLFTSVDLFKPATSKEGNSEIYVICRDFHSV 365 (399)
Q Consensus 315 VlK~F~~~e~~t~~Ll~lL~~~F~~V~v~KP~aSR~~sSE~YlVc~gf~g~ 365 (399)
++ ++.. .....++..+...|..+.+............+++|..-..+.
T Consensus 167 ~~-~~~~--~~~~~~~~~l~~~~~~~~i~~v~~~~~~~~~~~lv~~~k~~~ 214 (260)
T 2ozv_A 167 SL-ISRP--QSVAEIIAACGSRFGGLEITLIHPRPGEDAVRMLVTAIKGSR 214 (260)
T ss_dssp EE-EECG--GGHHHHHHHHTTTEEEEEEEEEESSTTSCCCEEEEEEEETCC
T ss_pred EE-EEcH--HHHHHHHHHHHhcCCceEEEEEcCCCCCCceEEEEEEEeCCC
Confidence 98 4444 236778888888888888777666666667778777655543
No 24
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=97.61 E-value=0.00012 Score=64.69 Aligned_cols=157 Identities=8% Similarity=-0.037 Sum_probs=79.0
Q ss_pred ceEEEeccCCChhHHHHHHhhhccCCCCccceeccccCCCcCCCCCCcEEeccccccccCccccCCCccccCCCChHHHH
Q psy15838 166 FTSIHLCEAPGAFITSLNHYLKLHHPRMQWDWIANTLNPHYEGNSFDEMISDDRLILGTHRKWYFGPDNTGNILVQNFVS 245 (399)
Q Consensus 166 ~~vlDLceaPGgFsqaln~yl~~~~~~~~w~~~a~sLnP~~e~n~~~~vI~dD~~~~~~~~~w~~G~d~tGDI~~~~~i~ 245 (399)
.++||+|||+|.++..+..... .++.+|++++|..-.. +...+..... +. ....||+.+
T Consensus 32 ~~vLDiG~G~G~~~~~l~~~~~------~~~v~~vD~~~~~~~~------a~~~~~~~~~-~~---~~~~~d~~~----- 90 (215)
T 4dzr_A 32 TRVIDVGTGSGCIAVSIALACP------GVSVTAVDLSMDALAV------ARRNAERFGA-VV---DWAAADGIE----- 90 (215)
T ss_dssp EEEEEEESSBCHHHHHHHHHCT------TEEEEEEECC-----------------------------CCHHHHHH-----
T ss_pred CEEEEecCCHhHHHHHHHHhCC------CCeEEEEECCHHHHHH------HHHHHHHhCC-ce---EEEEcchHh-----
Confidence 5999999999999987665421 2457777776642100 0000000000 00 013444433
Q ss_pred HHHHhhhhhhccCCCCCCCCCCCCcccEEEecCCCCCCCCCch-hHHH-----H---------HHHHHHHHHHHHhccCC
Q psy15838 246 HFKQHIGFLLIHDTSLAPHCTHASHCFLVTADGSFDCQGNPGE-QEIL-----V---------GKLHYREVQIALSLLHN 310 (399)
Q Consensus 246 ~i~~~v~~~~~~~~~~~~~~~~~~~vDLV~ADGs~d~sg~~~~-qe~~-----s---------~~L~~~el~~Al~~Lr~ 310 (399)
.+..... ..+.+|+|++|......+.... .... . .......+..+..+|++
T Consensus 91 ~~~~~~~--------------~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkp 156 (215)
T 4dzr_A 91 WLIERAE--------------RGRPWHAIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLAR 156 (215)
T ss_dssp HHHHHHH--------------TTCCBSEEEECCCCCC------------------------CTTHHHHHHHTCCGGGBCS
T ss_pred hhhhhhh--------------ccCcccEEEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcC
Confidence 1111000 1357999999866543321110 0000 0 01124445567789999
Q ss_pred CCE-EEEeEccCCCCCHHHHHHHHH---hcCCeeeeecCCCCCCCCceEEEEEeeccC
Q psy15838 311 GGN-LVIKIFTIFESDTICLMYLLA---CLFTSVDLFKPATSKEGNSEIYVICRDFHS 364 (399)
Q Consensus 311 GG~-fVlK~F~~~e~~t~~Ll~lL~---~~F~~V~v~KP~aSR~~sSE~YlVc~gf~g 364 (399)
||. +++-+ .. .....+...+. .-|..+.+.+....+ +++++++...+
T Consensus 157 gG~l~~~~~-~~--~~~~~~~~~l~~~~~gf~~~~~~~~~~~~----~r~~~~~~~~~ 207 (215)
T 4dzr_A 157 GRAGVFLEV-GH--NQADEVARLFAPWRERGFRVRKVKDLRGI----DRVIAVTREPG 207 (215)
T ss_dssp SSEEEEEEC-TT--SCHHHHHHHTGGGGGGTEECCEEECTTSC----EEEEEEEECC-
T ss_pred CCeEEEEEE-CC--ccHHHHHHHHHHhhcCCceEEEEEecCCC----EEEEEEEEcCC
Confidence 999 55543 22 23455555554 678888888876544 78888876543
No 25
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=97.45 E-value=0.00061 Score=63.49 Aligned_cols=56 Identities=9% Similarity=0.099 Sum_probs=42.5
Q ss_pred hhhhHHHHHHHHHHHHhCCCCCCCCCCceEEEeccCCChhHHHHHHhhhccCCCCccceeccccCC
Q psy15838 139 PQLATQAWCKFHEIVHSYNIVPQQENSFTSIHLCEAPGAFITSLNHYLKLHHPRMQWDWIANTLNP 204 (399)
Q Consensus 139 ~e~~trAw~KL~EId~~f~l~~~~~~~~~vlDLceaPGgFsqaln~yl~~~~~~~~w~~~a~sLnP 204 (399)
..|++|+.+||.++++.+.+-..+ .++||||||+|+|+.++... + ..+.+|+++.|
T Consensus 15 ~~yvsrg~~kL~~~L~~~~~~~~g---~~VLDiGcGtG~~t~~la~~----g---~~~V~gvDis~ 70 (232)
T 3opn_A 15 LRYVSRGGLKLEKALKEFHLEING---KTCLDIGSSTGGFTDVMLQN----G---AKLVYALDVGT 70 (232)
T ss_dssp CCSSSTTHHHHHHHHHHTTCCCTT---CEEEEETCTTSHHHHHHHHT----T---CSEEEEECSSC
T ss_pred CCccCCcHHHHHHHHHHcCCCCCC---CEEEEEccCCCHHHHHHHhc----C---CCEEEEEcCCH
Confidence 469999999999999999875544 39999999999999865442 1 11456666654
No 26
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=97.07 E-value=0.00012 Score=66.92 Aligned_cols=126 Identities=15% Similarity=0.064 Sum_probs=67.3
Q ss_pred hHHHHHHHHHHHHhCCCCCCCCCCceEEEeccCCChhHHHHHHhhhccCCCCccceeccccCCCcCCCCCCcEEeccccc
Q psy15838 142 ATQAWCKFHEIVHSYNIVPQQENSFTSIHLCEAPGAFITSLNHYLKLHHPRMQWDWIANTLNPHYEGNSFDEMISDDRLI 221 (399)
Q Consensus 142 ~trAw~KL~EId~~f~l~~~~~~~~~vlDLceaPGgFsqaln~yl~~~~~~~~w~~~a~sLnP~~e~n~~~~vI~dD~~~ 221 (399)
+++..+++.+..+...+-+. .++||||||+|.++..+...... ....+|++++|.. +..=+-.
T Consensus 59 ~~~~~~~~~~~l~~~~~~~~----~~vLDlG~G~G~~~~~la~~~g~-----~~~v~gvD~s~~~--------i~~~~~~ 121 (233)
T 2ipx_A 59 RSKLAAAILGGVDQIHIKPG----AKVLYLGAASGTTVSHVSDIVGP-----DGLVYAVEFSHRS--------GRDLINL 121 (233)
T ss_dssp TCHHHHHHHTTCSCCCCCTT----CEEEEECCTTSHHHHHHHHHHCT-----TCEEEEECCCHHH--------HHHHHHH
T ss_pred chhHHHHHHhHHheecCCCC----CEEEEEcccCCHHHHHHHHHhCC-----CcEEEEEECCHHH--------HHHHHHH
Confidence 45555666655555544332 39999999999999977654311 1235566554320 0000000
Q ss_pred cccCccccCCCccccCCCChHHHHHHHHhhhhhhccCCCCCCCCCCCCcccEEEecCCCCCCCCCchhHHHHHHHHHHHH
Q psy15838 222 LGTHRKWYFGPDNTGNILVQNFVSHFKQHIGFLLIHDTSLAPHCTHASHCFLVTADGSFDCQGNPGEQEILVGKLHYREV 301 (399)
Q Consensus 222 ~~~~~~w~~G~d~tGDI~~~~~i~~i~~~v~~~~~~~~~~~~~~~~~~~vDLV~ADGs~d~sg~~~~qe~~s~~L~~~el 301 (399)
....++.. ...||+.+...+. . ....+|+|++|.. .++.. ...+
T Consensus 122 a~~~~~v~---~~~~d~~~~~~~~---~-----------------~~~~~D~V~~~~~-----~~~~~--------~~~~ 165 (233)
T 2ipx_A 122 AKKRTNII---PVIEDARHPHKYR---M-----------------LIAMVDVIFADVA-----QPDQT--------RIVA 165 (233)
T ss_dssp HHHCTTEE---EECSCTTCGGGGG---G-----------------GCCCEEEEEECCC-----CTTHH--------HHHH
T ss_pred hhccCCeE---EEEcccCChhhhc---c-----------------cCCcEEEEEEcCC-----CccHH--------HHHH
Confidence 00001111 2577777642211 0 1246999999876 11111 1112
Q ss_pred HHHHhccCCCCEEEEeEcc
Q psy15838 302 QIALSLLHNGGNLVIKIFT 320 (399)
Q Consensus 302 ~~Al~~Lr~GG~fVlK~F~ 320 (399)
.-+..+|+|||.+++-+..
T Consensus 166 ~~~~~~LkpgG~l~i~~~~ 184 (233)
T 2ipx_A 166 LNAHTFLRNGGHFVISIKA 184 (233)
T ss_dssp HHHHHHEEEEEEEEEEEEH
T ss_pred HHHHHHcCCCeEEEEEEcc
Confidence 3377899999999996654
No 27
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=97.02 E-value=0.0026 Score=64.79 Aligned_cols=124 Identities=13% Similarity=0.075 Sum_probs=73.9
Q ss_pred ceEEEeccC------CChhHHH-HHHhhhccCCCCccceeccccCCCcCCCCCCcEEeccccccccCccccCCCccccCC
Q psy15838 166 FTSIHLCEA------PGAFITS-LNHYLKLHHPRMQWDWIANTLNPHYEGNSFDEMISDDRLILGTHRKWYFGPDNTGNI 238 (399)
Q Consensus 166 ~~vlDLcea------PGgFsqa-ln~yl~~~~~~~~w~~~a~sLnP~~e~n~~~~vI~dD~~~~~~~~~w~~G~d~tGDI 238 (399)
.++|||||| .||++.. +..|.. . -..+|++++|... . ..++.. ..+||+
T Consensus 218 ~rVLDIGCG~~~~~~TGG~Sl~la~~~fP----~--a~V~GVDiSp~m~--------~-------~~~rI~---fv~GDa 273 (419)
T 3sso_A 218 VRVLEIGVGGYKHPEWGGGSLRMWKSFFP----R--GQIYGLDIMDKSH--------V-------DELRIR---TIQGDQ 273 (419)
T ss_dssp CEEEEECCSCTTCSSCCCHHHHHHHHHCT----T--CEEEEEESSCCGG--------G-------CBTTEE---EEECCT
T ss_pred CEEEEEecCCCcCCCCCHHHHHHHHHhCC----C--CEEEEEECCHHHh--------h-------cCCCcE---EEEecc
Confidence 599999999 5555543 333321 1 2467777766421 0 001101 278999
Q ss_pred CChHHHHHHHHhhhhhhccCCCCCCCCCCCCcccEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHhccCCCCEEEEeE
Q psy15838 239 LVQNFVSHFKQHIGFLLIHDTSLAPHCTHASHCFLVTADGSFDCQGNPGEQEILVGKLHYREVQIALSLLHNGGNLVIKI 318 (399)
Q Consensus 239 ~~~~~i~~i~~~v~~~~~~~~~~~~~~~~~~~vDLV~ADGs~d~sg~~~~qe~~s~~L~~~el~~Al~~Lr~GG~fVlK~ 318 (399)
.+......+... .++||+|++||+... .+ ....+.-+..+|+|||.||+.-
T Consensus 274 ~dlpf~~~l~~~-----------------d~sFDlVisdgsH~~-----~d-------~~~aL~el~rvLKPGGvlVi~D 324 (419)
T 3sso_A 274 NDAEFLDRIARR-----------------YGPFDIVIDDGSHIN-----AH-------VRTSFAALFPHVRPGGLYVIED 324 (419)
T ss_dssp TCHHHHHHHHHH-----------------HCCEEEEEECSCCCH-----HH-------HHHHHHHHGGGEEEEEEEEEEC
T ss_pred cccchhhhhhcc-----------------cCCccEEEECCcccc-----hh-------HHHHHHHHHHhcCCCeEEEEEe
Confidence 997777666541 246999999987431 11 1235666789999999999963
Q ss_pred --------ccCCC---CCHHHHHHHHHhcCCeeee
Q psy15838 319 --------FTIFE---SDTICLMYLLACLFTSVDL 342 (399)
Q Consensus 319 --------F~~~e---~~t~~Ll~lL~~~F~~V~v 342 (399)
|.+.. ..-..++..++.+++.++.
T Consensus 325 l~tsy~p~f~G~~~~~~~~~tii~~lk~l~D~l~~ 359 (419)
T 3sso_A 325 MWTAYWPGFGGQADPQECSGTSLGLLKSLIDAIQH 359 (419)
T ss_dssp GGGGGCTBTTCCSSTTCCTTSHHHHHHHHHHHHTG
T ss_pred cccccCcccCCCccCCcchhHHHHHHHHHHHHhcc
Confidence 33321 1224466666666666553
No 28
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=96.96 E-value=0.029 Score=48.17 Aligned_cols=73 Identities=11% Similarity=-0.032 Sum_probs=46.7
Q ss_pred CcccEEEecCCC-CCCCCCchhHHHHHHHHHHHHHHHHhccCCCCEEEEeEccCCCCCHHHHHHHHHhc-CCeeeeecCC
Q psy15838 269 SHCFLVTADGSF-DCQGNPGEQEILVGKLHYREVQIALSLLHNGGNLVIKIFTIFESDTICLMYLLACL-FTSVDLFKPA 346 (399)
Q Consensus 269 ~~vDLV~ADGs~-d~sg~~~~qe~~s~~L~~~el~~Al~~Lr~GG~fVlK~F~~~e~~t~~Ll~lL~~~-F~~V~v~KP~ 346 (399)
+.+|+|++.+.. .... .. -....+..+..+|++||.+|+-+..........+...+... |+-+.++...
T Consensus 106 ~~~D~i~~~~~~~~~~~--~~-------~~~~~l~~~~~~l~~~G~l~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~ 176 (195)
T 3cgg_A 106 TDFDLIVSAGNVMGFLA--ED-------GREPALANIHRALGADGRAVIGFGAGRGWVFGDFLEVAERVGLELENAFESW 176 (195)
T ss_dssp CCEEEEEECCCCGGGSC--HH-------HHHHHHHHHHHHEEEEEEEEEEEETTSSCCHHHHHHHHHHHTEEEEEEESST
T ss_pred CceeEEEECCcHHhhcC--hH-------HHHHHHHHHHHHhCCCCEEEEEeCCCCCcCHHHHHHHHHHcCCEEeeeeccc
Confidence 579999998532 2111 11 12334455678999999999988776544566777776654 8877776664
Q ss_pred CCCC
Q psy15838 347 TSKE 350 (399)
Q Consensus 347 aSR~ 350 (399)
..++
T Consensus 177 ~~~~ 180 (195)
T 3cgg_A 177 DLKP 180 (195)
T ss_dssp TCCB
T ss_pred ccCc
Confidence 4443
No 29
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=96.91 E-value=0.0097 Score=51.24 Aligned_cols=64 Identities=14% Similarity=0.179 Sum_probs=45.8
Q ss_pred CcccEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHhccCCCCEEEEeEccCCCCCHHHHHHHHHhcCCeeeeec
Q psy15838 269 SHCFLVTADGSFDCQGNPGEQEILVGKLHYREVQIALSLLHNGGNLVIKIFTIFESDTICLMYLLACLFTSVDLFK 344 (399)
Q Consensus 269 ~~vDLV~ADGs~d~sg~~~~qe~~s~~L~~~el~~Al~~Lr~GG~fVlK~F~~~e~~t~~Ll~lL~~~F~~V~v~K 344 (399)
+.+|+|+++...... . ......+..+..+|++||.+++-..... ....+...|...|..+.+++
T Consensus 118 ~~~D~v~~~~~~~~~----~------~~~~~~l~~~~~~L~~gG~l~~~~~~~~--~~~~~~~~l~~~~~~~~~~~ 181 (194)
T 1dus_A 118 RKYNKIITNPPIRAG----K------EVLHRIIEEGKELLKDNGEIWVVIQTKQ--GAKSLAKYMKDVFGNVETVT 181 (194)
T ss_dssp SCEEEEEECCCSTTC----H------HHHHHHHHHHHHHEEEEEEEEEEEESTH--HHHHHHHHHHHHHSCCEEEE
T ss_pred CCceEEEECCCcccc----h------hHHHHHHHHHHHHcCCCCEEEEEECCCC--ChHHHHHHHHHHhcceEEEe
Confidence 469999998754321 1 1223344556789999999999998873 35568888888899888775
No 30
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=96.87 E-value=0.0008 Score=63.71 Aligned_cols=75 Identities=16% Similarity=0.160 Sum_probs=40.3
Q ss_pred CcccEEEecCCCCCCCCC------chhHH-HHHHHHHHHHHHHHhccCCCCEEEEeEccCCCCCHHHHHH-HHHhcCCee
Q psy15838 269 SHCFLVTADGSFDCQGNP------GEQEI-LVGKLHYREVQIALSLLHNGGNLVIKIFTIFESDTICLMY-LLACLFTSV 340 (399)
Q Consensus 269 ~~vDLV~ADGs~d~sg~~------~~qe~-~s~~L~~~el~~Al~~Lr~GG~fVlK~F~~~e~~t~~Ll~-lL~~~F~~V 340 (399)
..+|+|++|......|.- ..+.. ....+....+..|..+|++||.+|+=..+.........+. .|.. ...+
T Consensus 155 ~~fD~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stcs~~~~ene~~v~~~l~~-~~~~ 233 (274)
T 3ajd_A 155 IFFDKILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTCSMEVEENEEVIKYILQK-RNDV 233 (274)
T ss_dssp CCEEEEEEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEESCCCTTSSHHHHHHHHHH-CSSE
T ss_pred ccCCEEEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEECCCChHHhHHHHHHHHHh-CCCc
Confidence 469999999433222211 00000 0112334556678899999999999776654323344444 4544 3445
Q ss_pred eeec
Q psy15838 341 DLFK 344 (399)
Q Consensus 341 ~v~K 344 (399)
.+..
T Consensus 234 ~~~~ 237 (274)
T 3ajd_A 234 ELII 237 (274)
T ss_dssp EEEC
T ss_pred EEec
Confidence 5544
No 31
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=96.84 E-value=0.00099 Score=64.66 Aligned_cols=67 Identities=18% Similarity=0.245 Sum_probs=38.9
Q ss_pred CcccEEEecCCCCCCCC----Cc-------hhHHHHHHHHHHHHHHHHhccCCCCEEEEeEccCCCCCHHH-HHHHHHh
Q psy15838 269 SHCFLVTADGSFDCQGN----PG-------EQEILVGKLHYREVQIALSLLHNGGNLVIKIFTIFESDTIC-LMYLLAC 335 (399)
Q Consensus 269 ~~vDLV~ADGs~d~sg~----~~-------~qe~~s~~L~~~el~~Al~~Lr~GG~fVlK~F~~~e~~t~~-Ll~lL~~ 335 (399)
..+|+|++|.--...|. ++ .+-.....+....+..|..+|++||.+|+=..+........ +...|..
T Consensus 186 ~~fD~Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs~~~~Ene~~v~~~l~~ 264 (315)
T 1ixk_A 186 VEFDKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCSLEPEENEFVIQWALDN 264 (315)
T ss_dssp CCEEEEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCCGGGTHHHHHHHHHH
T ss_pred ccCCEEEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCCCChHHhHHHHHHHHhc
Confidence 46999999954322221 11 11112234556677778999999999998766544222233 3345554
No 32
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=96.77 E-value=0.0026 Score=65.59 Aligned_cols=68 Identities=18% Similarity=0.137 Sum_probs=41.2
Q ss_pred CcccEEEecCCCCCCCC----Cc-------hhHHHHHHHHHHHHHHHHhccCCCCEEEEeEccCCCCCHHHHH-HHHHhc
Q psy15838 269 SHCFLVTADGSFDCQGN----PG-------EQEILVGKLHYREVQIALSLLHNGGNLVIKIFTIFESDTICLM-YLLACL 336 (399)
Q Consensus 269 ~~vDLV~ADGs~d~sg~----~~-------~qe~~s~~L~~~el~~Al~~Lr~GG~fVlK~F~~~e~~t~~Ll-~lL~~~ 336 (399)
+.||+|++|.--.-.|. ++ .+-.....+....+..|..+|+|||.+|.=+-+.........+ ..|..+
T Consensus 169 ~~FD~Il~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysTCs~~~eEne~vv~~~l~~~ 248 (464)
T 3m6w_A 169 TYFHRVLLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTCTFAPEENEGVVAHFLKAH 248 (464)
T ss_dssp SCEEEEEEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCCGGGTHHHHHHHHHHC
T ss_pred ccCCEEEECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeccCchhcCHHHHHHHHHHC
Confidence 46999999954322221 11 1112234666777888999999999999766554422234444 455553
No 33
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=96.77 E-value=0.011 Score=59.71 Aligned_cols=131 Identities=16% Similarity=0.203 Sum_probs=71.6
Q ss_pred ceEEEeccCCChhHHHHHHhhhccCCCCccceeccccCCCcCCCCCCcEEeccccccccCccccCCC---ccccCCCChH
Q psy15838 166 FTSIHLCEAPGAFITSLNHYLKLHHPRMQWDWIANTLNPHYEGNSFDEMISDDRLILGTHRKWYFGP---DNTGNILVQN 242 (399)
Q Consensus 166 ~~vlDLceaPGgFsqaln~yl~~~~~~~~w~~~a~sLnP~~e~n~~~~vI~dD~~~~~~~~~w~~G~---d~tGDI~~~~ 242 (399)
.+|||+||||||++..+..... . ...+|++++|..- ..+ .... . ..|. ...||..+..
T Consensus 248 ~~VLDlgaG~G~~t~~la~~~~----~--~~v~a~D~~~~~l-----~~~-~~~~-----~--~~g~~~~~~~~D~~~~~ 308 (429)
T 1sqg_A 248 EHILDLCAAPGGKTTHILEVAP----E--AQVVAVDIDEQRL-----SRV-YDNL-----K--RLGMKATVKQGDGRYPS 308 (429)
T ss_dssp CEEEEESCTTCHHHHHHHHHCT----T--CEEEEEESSTTTH-----HHH-HHHH-----H--HTTCCCEEEECCTTCTH
T ss_pred CeEEEECCCchHHHHHHHHHcC----C--CEEEEECCCHHHH-----HHH-HHHH-----H--HcCCCeEEEeCchhhch
Confidence 4999999999999987665432 1 2345555544210 000 0000 0 0011 2567776532
Q ss_pred HHHHHHHhhhhhhccCCCCCCCCCCCCcccEEEecCCCCCCC----CCch-------hHHHHHHHHHHHHHHHHhccCCC
Q psy15838 243 FVSHFKQHIGFLLIHDTSLAPHCTHASHCFLVTADGSFDCQG----NPGE-------QEILVGKLHYREVQIALSLLHNG 311 (399)
Q Consensus 243 ~i~~i~~~v~~~~~~~~~~~~~~~~~~~vDLV~ADGs~d~sg----~~~~-------qe~~s~~L~~~el~~Al~~Lr~G 311 (399)
. .+ ..+.+|+|++|.--...| .++. +-.....+....+..|..+|++|
T Consensus 309 ~--~~-------------------~~~~fD~Vl~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpG 367 (429)
T 1sqg_A 309 Q--WC-------------------GEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTG 367 (429)
T ss_dssp H--HH-------------------TTCCEEEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEE
T ss_pred h--hc-------------------ccCCCCEEEEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 1 01 124699999995432222 1211 11123355667777889999999
Q ss_pred CEEEEeEccCCC-CCHHHHHHHHHhc
Q psy15838 312 GNLVIKIFTIFE-SDTICLMYLLACL 336 (399)
Q Consensus 312 G~fVlK~F~~~e-~~t~~Ll~lL~~~ 336 (399)
|.+|+=..+... .....+...|..+
T Consensus 368 G~lvystcs~~~~ene~~v~~~l~~~ 393 (429)
T 1sqg_A 368 GTLVYATCSVLPEENSLQIKAFLQRT 393 (429)
T ss_dssp EEEEEEESCCCGGGTHHHHHHHHHHC
T ss_pred CEEEEEECCCChhhHHHHHHHHHHhC
Confidence 999998766542 2333444566653
No 34
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=96.77 E-value=0.032 Score=57.08 Aligned_cols=104 Identities=10% Similarity=0.138 Sum_probs=58.5
Q ss_pred CccchhhHHHHHHHHHHHhhhcCccchhHHHhhhcccC----chhhHHHHHHhh------------------cchhhhHH
Q psy15838 87 PSIKLENFQALKEKLNDVKSNLNHVHLKTWHQHTNFVN----RSSKVVQSVKRF------------------IKPQLATQ 144 (399)
Q Consensus 87 ~~~~~~~l~~lk~~Ln~~K~~l~~~~~~~w~~ht~~~n----~~~~i~~~vk~~------------------~~~e~~tr 144 (399)
+...++++++|-+.+|.+-..+. +.|+-+++... |...++.+|-+. ...-|-..
T Consensus 82 ~~~~~~~~~~l~~~yN~~~~~~~----~~~~g~~~~~~~~~~~~~~~~~~Il~~~Y~r~V~~~~~L~~Ye~Fs~~vYGEt 157 (438)
T 3uwp_A 82 DTKSFESMQRLCDKYNRAIDSIH----QLWKGTTQPMKLNTRPSTGLLRHILQQVYNHSVTDPEKLNNYEPFSPEVYGET 157 (438)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHHH----HHHHSSSCCCCCSBCCCHHHHHHHHHHHHHHHCSCGGGSCCCSSSCGGGGGGT
T ss_pred CccCHHHHHHHHHHHHHHHHHHH----HhhccccCcccccCCCCHHHHHHHHHHHHhhcCCCHHHhcCcccCCCcccCCC
Confidence 34567788888888887655554 66654443332 333444433210 00123333
Q ss_pred HHHHHHHHHHhCCCCCCCCCCceEEEeccCCChhHHHHHHhhhccCCCCccceeccccCC
Q psy15838 145 AWCKFHEIVHSYNIVPQQENSFTSIHLCEAPGAFITSLNHYLKLHHPRMQWDWIANTLNP 204 (399)
Q Consensus 145 Aw~KL~EId~~f~l~~~~~~~~~vlDLceaPGgFsqaln~yl~~~~~~~~w~~~a~sLnP 204 (399)
..-.+.+|.+..++-+. .+|+|||||.|..+-.+..... + ...+|++++|
T Consensus 158 ~~~~i~~il~~l~l~~g----d~VLDLGCGtG~l~l~lA~~~g-----~-~kVvGIDiS~ 207 (438)
T 3uwp_A 158 SFDLVAQMIDEIKMTDD----DLFVDLGSGVGQVVLQVAAATN-----C-KHHYGVEKAD 207 (438)
T ss_dssp HHHHHHHHHHHHCCCTT----CEEEEESCTTSHHHHHHHHHCC-----C-SEEEEEECCH
T ss_pred CHHHHHHHHHhcCCCCC----CEEEEeCCCCCHHHHHHHHHCC-----C-CEEEEEeCCH
Confidence 34446667777665543 3999999999999875543211 1 1356666654
No 35
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=96.74 E-value=0.0065 Score=52.87 Aligned_cols=90 Identities=10% Similarity=0.087 Sum_probs=42.2
Q ss_pred CCcccEEEecC-CCCCCCCCchhHHHHHHHHHHHHHHHHhccCCCCEEEEeEccCCCCC---HHHHHHHHH---hcCCee
Q psy15838 268 ASHCFLVTADG-SFDCQGNPGEQEILVGKLHYREVQIALSLLHNGGNLVIKIFTIFESD---TICLMYLLA---CLFTSV 340 (399)
Q Consensus 268 ~~~vDLV~ADG-s~d~sg~~~~qe~~s~~L~~~el~~Al~~Lr~GG~fVlK~F~~~e~~---t~~Ll~lL~---~~F~~V 340 (399)
..++|+|+++. .... +.....+ ........+..+..+|+|||.+++-+|.+.... ...+...+. ...-.+
T Consensus 87 ~~~fD~v~~~~~~~~~-~~~~~~~--~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 163 (185)
T 3mti_A 87 REPIRAAIFNLGYLPS-ADKSVIT--KPHTTLEAIEKILDRLEVGGRLAIMIYYGHDGGDMEKDAVLEYVIGLDQRVFTA 163 (185)
T ss_dssp CSCEEEEEEEEC--------------CHHHHHHHHHHHHHHEEEEEEEEEEEC------CHHHHHHHHHHHHSCTTTEEE
T ss_pred cCCcCEEEEeCCCCCC-cchhccc--ChhhHHHHHHHHHHhcCCCcEEEEEEeCCCCCCHHHHHHHHHHHHhCCCceEEE
Confidence 35799999984 3221 1111100 112233446677899999999999999764321 122222222 222234
Q ss_pred eeecCCCCCCCCceEEEEEe
Q psy15838 341 DLFKPATSKEGNSEIYVICR 360 (399)
Q Consensus 341 ~v~KP~aSR~~sSE~YlVc~ 360 (399)
..+.+...+.....+|+|.+
T Consensus 164 ~~~~~~~~~~~~~~~~~i~~ 183 (185)
T 3mti_A 164 MLYQPLNQINTPPFLVMLEK 183 (185)
T ss_dssp EEEEESSCSSCCCEEEEEEE
T ss_pred EEehhhccCCCCCeEEEEEe
Confidence 44555443344455555543
No 36
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=96.71 E-value=0.0036 Score=64.42 Aligned_cols=65 Identities=18% Similarity=0.323 Sum_probs=40.3
Q ss_pred CcccEEEecCCCCCCCCC------c-------hhHHHHHHHHHHHHHHHHhccCCCCEEEEeEccCCCCCHHHHH-HHHH
Q psy15838 269 SHCFLVTADGSFDCQGNP------G-------EQEILVGKLHYREVQIALSLLHNGGNLVIKIFTIFESDTICLM-YLLA 334 (399)
Q Consensus 269 ~~vDLV~ADGs~d~sg~~------~-------~qe~~s~~L~~~el~~Al~~Lr~GG~fVlK~F~~~e~~t~~Ll-~lL~ 334 (399)
+.||+|++|.- |+|.. + .+-.....+....+..|..+|+|||.+|.=+-+.........+ ..|.
T Consensus 174 ~~FD~Il~DaP--CSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTCs~~~eEne~vv~~~l~ 251 (456)
T 3m4x_A 174 GFFDRIVVDAP--CSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTCTFAPEENEEIISWLVE 251 (456)
T ss_dssp TCEEEEEEECC--CCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCCCGGGTHHHHHHHHH
T ss_pred ccCCEEEECCC--CCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEeecccccCHHHHHHHHH
Confidence 46999999953 44421 1 1111234566677888999999999999766555422234444 4555
Q ss_pred h
Q psy15838 335 C 335 (399)
Q Consensus 335 ~ 335 (399)
.
T Consensus 252 ~ 252 (456)
T 3m4x_A 252 N 252 (456)
T ss_dssp H
T ss_pred h
Confidence 4
No 37
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=96.66 E-value=0.0072 Score=62.39 Aligned_cols=68 Identities=18% Similarity=0.263 Sum_probs=40.3
Q ss_pred CcccEEEecCCCCCCC----CCc-------hhHHHHHHHHHHHHHHHHhccCCCCEEEEeEccCCCCCHHH-HHHHHHhc
Q psy15838 269 SHCFLVTADGSFDCQG----NPG-------EQEILVGKLHYREVQIALSLLHNGGNLVIKIFTIFESDTIC-LMYLLACL 336 (399)
Q Consensus 269 ~~vDLV~ADGs~d~sg----~~~-------~qe~~s~~L~~~el~~Al~~Lr~GG~fVlK~F~~~e~~t~~-Ll~lL~~~ 336 (399)
..||+|++|.--.-.| +++ .+-.....+....+..|..+|++||.+|.=..+........ +-..|..+
T Consensus 186 ~~fD~Il~D~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTcs~~~~Ene~vv~~~l~~~ 265 (479)
T 2frx_A 186 EMFDAILLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTCTLNQEENEAVCLWLKETY 265 (479)
T ss_dssp TCEEEEEEECCCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCSSTTTHHHHHHHHHHS
T ss_pred ccCCEEEECCCcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEecccCCcccCHHHHHHHHHHC
Confidence 4699999995322222 111 11122345566677888999999999998766554222333 44456554
No 38
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=96.64 E-value=0.0021 Score=60.83 Aligned_cols=80 Identities=9% Similarity=-0.041 Sum_probs=57.7
Q ss_pred CcccEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHhccCCCCEEEEeEccCCCC---CHHHHHHHHHhc-CCeeeeec
Q psy15838 269 SHCFLVTADGSFDCQGNPGEQEILVGKLHYREVQIALSLLHNGGNLVIKIFTIFES---DTICLMYLLACL-FTSVDLFK 344 (399)
Q Consensus 269 ~~vDLV~ADGs~d~sg~~~~qe~~s~~L~~~el~~Al~~Lr~GG~fVlK~F~~~e~---~t~~Ll~lL~~~-F~~V~v~K 344 (399)
..+|+|++|... +..+ .+..++..|+|||.+++-.+...+. .....+..+... ..++.+.+
T Consensus 185 ~~~D~Vi~d~p~------~~~~---------~l~~~~~~LkpgG~l~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (272)
T 3a27_A 185 DVADRVIMGYVH------KTHK---------FLDKTFEFLKDRGVIHYHETVAEKIMYERPIERLKFYAEKNGYKLIDYE 249 (272)
T ss_dssp TCEEEEEECCCS------SGGG---------GHHHHHHHEEEEEEEEEEEEEEGGGTTTHHHHHHHHHHHHTTEEEEEEE
T ss_pred CCceEEEECCcc------cHHH---------HHHHHHHHcCCCCEEEEEEcCccccccccHHHHHHHHHHHhCCeeEEeE
Confidence 469999999764 1111 2344667899999999998876321 234556666654 46788888
Q ss_pred CCCCCCCCceEEEEEeecc
Q psy15838 345 PATSKEGNSEIYVICRDFH 363 (399)
Q Consensus 345 P~aSR~~sSE~YlVc~gf~ 363 (399)
...+|..+...|.+|..|+
T Consensus 250 ~~~v~~~~p~~~~~~~d~~ 268 (272)
T 3a27_A 250 VRKIKKYAPGVWHVVVDAK 268 (272)
T ss_dssp EEEEEEEETTEEEEEEEEE
T ss_pred EEEEEEECCCCCEEEEEEE
Confidence 8888888888999999886
No 39
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=96.61 E-value=0.0031 Score=62.95 Aligned_cols=66 Identities=12% Similarity=0.151 Sum_probs=40.6
Q ss_pred CCcccEEEecCCCCCCCC--------Cc-------hhHHHHHHHHHHHHHHHHhccCCCCEEEEeEccCCCCCHHHHH-H
Q psy15838 268 ASHCFLVTADGSFDCQGN--------PG-------EQEILVGKLHYREVQIALSLLHNGGNLVIKIFTIFESDTICLM-Y 331 (399)
Q Consensus 268 ~~~vDLV~ADGs~d~sg~--------~~-------~qe~~s~~L~~~el~~Al~~Lr~GG~fVlK~F~~~e~~t~~Ll-~ 331 (399)
...||.|+.|. .|+|. ++ .+-.....+...-+..|+.+|+|||.+|-=+=+........++ .
T Consensus 221 ~~~fD~VLlDa--PCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LVYsTCSl~~~ENE~vV~~ 298 (359)
T 4fzv_A 221 GDTYDRVLVDV--PCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTCSLSHLQNEYVVQG 298 (359)
T ss_dssp TTCEEEEEEEC--CCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEEESCCCTTTTHHHHHH
T ss_pred cccCCEEEECC--ccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEeCCCchhhCHHHHHH
Confidence 35799999996 45552 11 1111234566667778999999999999766665533334444 3
Q ss_pred HHHh
Q psy15838 332 LLAC 335 (399)
Q Consensus 332 lL~~ 335 (399)
.|..
T Consensus 299 ~L~~ 302 (359)
T 4fzv_A 299 AIEL 302 (359)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 4543
No 40
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=96.59 E-value=0.019 Score=58.28 Aligned_cols=68 Identities=19% Similarity=0.264 Sum_probs=41.3
Q ss_pred CcccEEEecCCCCCCCC----Cch-------hHHHHHHHHHHHHHHHHhccCCCCEEEEeEccCCCC-CHHHHHHHHHhc
Q psy15838 269 SHCFLVTADGSFDCQGN----PGE-------QEILVGKLHYREVQIALSLLHNGGNLVIKIFTIFES-DTICLMYLLACL 336 (399)
Q Consensus 269 ~~vDLV~ADGs~d~sg~----~~~-------qe~~s~~L~~~el~~Al~~Lr~GG~fVlK~F~~~e~-~t~~Ll~lL~~~ 336 (399)
+.+|+|++|.-....|. ++. +-.....+....+..|..+|+|||.+|.=..+.... ....+...|..+
T Consensus 329 ~~fD~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tcs~~~~ene~~v~~~l~~~ 408 (450)
T 2yxl_A 329 EVADKVLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCSIFKEENEKNIRWFLNVH 408 (450)
T ss_dssp SCEEEEEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCCGGGTHHHHHHHHHHC
T ss_pred CCCCEEEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCChhhHHHHHHHHHHhC
Confidence 56999999954322221 211 111233455666778899999999999877766522 233444566664
No 41
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=96.51 E-value=0.022 Score=51.17 Aligned_cols=76 Identities=11% Similarity=-0.097 Sum_probs=44.0
Q ss_pred CcccEEEecCCCCCCCCCchhHHH--------HHHHHHHHHHHHHhccCCCCEEEEeEccCCCCCHHHHHHHHHhcCCee
Q psy15838 269 SHCFLVTADGSFDCQGNPGEQEIL--------VGKLHYREVQIALSLLHNGGNLVIKIFTIFESDTICLMYLLACLFTSV 340 (399)
Q Consensus 269 ~~vDLV~ADGs~d~sg~~~~qe~~--------s~~L~~~el~~Al~~Lr~GG~fVlK~F~~~e~~t~~Ll~lL~~~F~~V 340 (399)
+.+|+|++|-.....+.....+.. ...+....+..+..+|++||.+++-+-... .....+...+....-++
T Consensus 122 ~~fD~I~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~-~~~~~~~~~l~~~g~~~ 200 (230)
T 3evz_A 122 GTFDVIFSAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLPDKE-KLLNVIKERGIKLGYSV 200 (230)
T ss_dssp SCEEEEEECCCCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEESCH-HHHHHHHHHHHHTTCEE
T ss_pred CceeEEEECCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEecccH-hHHHHHHHHHHHcCCce
Confidence 579999998554333221111100 012235566778899999999999665442 12456777777765577
Q ss_pred eeecC
Q psy15838 341 DLFKP 345 (399)
Q Consensus 341 ~v~KP 345 (399)
..++.
T Consensus 201 ~~~~~ 205 (230)
T 3evz_A 201 KDIKF 205 (230)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 77665
No 42
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=96.50 E-value=0.0056 Score=57.47 Aligned_cols=59 Identities=12% Similarity=0.118 Sum_probs=39.2
Q ss_pred HHHHHHHHHhccCCCCEEEEeEccCCCCCHHHHHHHHHhc-CCeeeeecCCCCCCCCceEEEEEeec
Q psy15838 297 HYREVQIALSLLHNGGNLVIKIFTIFESDTICLMYLLACL-FTSVDLFKPATSKEGNSEIYVICRDF 362 (399)
Q Consensus 297 ~~~el~~Al~~Lr~GG~fVlK~F~~~e~~t~~Ll~lL~~~-F~~V~v~KP~aSR~~sSE~YlVc~gf 362 (399)
....+..+..+|++||.+++-+-. .....+..++... |+.+.+.+..+ ..++.++++.|
T Consensus 217 ~~~~l~~~~~~LkpgG~l~~~~~~---~~~~~~~~~l~~~Gf~~v~~~~d~~----g~~r~~~~~~~ 276 (276)
T 2b3t_A 217 IVHIIEQSRNALVSGGFLLLEHGW---QQGEAVRQAFILAGYHDVETCRDYG----DNERVTLGRYY 276 (276)
T ss_dssp HHHHHHHHGGGEEEEEEEEEECCS---SCHHHHHHHHHHTTCTTCCEEECTT----SSEEEEEEECC
T ss_pred HHHHHHHHHHhcCCCCEEEEEECc---hHHHHHHHHHHHCCCcEEEEEecCC----CCCcEEEEEEC
Confidence 344556688999999999985422 2345566666554 88888877543 45677777643
No 43
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=96.45 E-value=0.004 Score=60.15 Aligned_cols=86 Identities=17% Similarity=0.185 Sum_probs=52.8
Q ss_pred CCcccEEEecCCCCCCCCCchhHHHHHHHH-HHHHHHHHhccCCCCEEEEeEccCC--CCCHHHHHHHHHhcCCeeeeec
Q psy15838 268 ASHCFLVTADGSFDCQGNPGEQEILVGKLH-YREVQIALSLLHNGGNLVIKIFTIF--ESDTICLMYLLACLFTSVDLFK 344 (399)
Q Consensus 268 ~~~vDLV~ADGs~d~sg~~~~qe~~s~~L~-~~el~~Al~~Lr~GG~fVlK~F~~~--e~~t~~Ll~lL~~~F~~V~v~K 344 (399)
.+.+|+|++|...... . . + .|. ..-+..+.+.|++||.||+-.-... ......++..++..|..|..+-
T Consensus 155 ~~~fDvIi~D~~~p~~-~-~--~----~l~~~~f~~~~~~~LkpgG~lv~~~~s~~~~~~~~~~~~~~l~~~F~~v~~~~ 226 (294)
T 3adn_A 155 SQTFDVIISDCTDPIG-P-G--E----SLFTSAFYEGCKRCLNPGGIFVAQNGVCFLQQEEAIDSHRKLSHYFSDVGFYQ 226 (294)
T ss_dssp CCCEEEEEECC------------------CCHHHHHHHHHTEEEEEEEEEEEEECSSCCHHHHHHHHHHHHHCSEEEEEE
T ss_pred CCCccEEEECCCCccC-c-c--h----hccHHHHHHHHHHhcCCCCEEEEecCCcccchHHHHHHHHHHHHHCCCeEEEE
Confidence 3579999999874331 1 1 0 111 1223456789999999999863221 1236678888999999988654
Q ss_pred -CCCCCCCCceEEEEEee
Q psy15838 345 -PATSKEGNSEIYVICRD 361 (399)
Q Consensus 345 -P~aSR~~sSE~YlVc~g 361 (399)
+..+.++..-.|++|..
T Consensus 227 ~~vp~~p~g~~~f~~as~ 244 (294)
T 3adn_A 227 AAIPTYYGGIMTFAWATD 244 (294)
T ss_dssp EECTTSSSSEEEEEEEES
T ss_pred EEecccCCCceEEEEEeC
Confidence 33345566668888864
No 44
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=96.39 E-value=0.0048 Score=60.20 Aligned_cols=96 Identities=8% Similarity=-0.050 Sum_probs=45.7
Q ss_pred CcccEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHhccCCCCEEEEeEccCCCCC-HHHHHHHHHhcCCeeeeecCCC
Q psy15838 269 SHCFLVTADGSFDCQGNPGEQEILVGKLHYREVQIALSLLHNGGNLVIKIFTIFESD-TICLMYLLACLFTSVDLFKPAT 347 (399)
Q Consensus 269 ~~vDLV~ADGs~d~sg~~~~qe~~s~~L~~~el~~Al~~Lr~GG~fVlK~F~~~e~~-t~~Ll~lL~~~F~~V~v~KP~a 347 (399)
..||+|++++.. ++.+ ..+.-+.+.|+|||.+|+....+.... ...+-.....-|+.+.++-|..
T Consensus 187 ~~FDvV~~~a~~-----~d~~---------~~l~el~r~LkPGG~Lvv~~~~~~r~~l~~~v~~~~~~gf~~~~~~~p~~ 252 (298)
T 3fpf_A 187 LEFDVLMVAALA-----EPKR---------RVFRNIHRYVDTETRIIYRTYTGMRAILYAPVSDDDITGFRRAGVVLPSG 252 (298)
T ss_dssp CCCSEEEECTTC-----SCHH---------HHHHHHHHHCCTTCEEEEEECCGGGGGSSCCCCTGGGTTEEEEEEECCCT
T ss_pred CCcCEEEECCCc-----cCHH---------HHHHHHHHHcCCCcEEEEEcCcchhhhccccCChhhhhhhhheeEECCCC
Confidence 469999987762 2222 223446679999999999876542110 0001112445799999998854
Q ss_pred CCCCCceEEEEEeeccCCccccccccccccchhh
Q psy15838 348 SKEGNSEIYVICRDFHSVCSQVWIYLNLPPVKKE 381 (399)
Q Consensus 348 SR~~sSE~YlVc~gf~g~~~~~~~~~~~~~~~~~ 381 (399)
...|+ -++++....+.--+-+++-+.-|.+-
T Consensus 253 -~v~N~--vv~a~k~~~~~~~~~~~~~~~~~~~~ 283 (298)
T 3fpf_A 253 -KVNNT--SVLVFKCPDKGELNSKLEGKPIPNPL 283 (298)
T ss_dssp -TCCCE--EEEEEECC------------------
T ss_pred -CcCcE--EEEEEccCCchHHHHHHhcccCCcce
Confidence 44554 23334444444447777776666554
No 45
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=96.36 E-value=0.074 Score=47.05 Aligned_cols=92 Identities=10% Similarity=-0.061 Sum_probs=57.4
Q ss_pred CCcccEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHhccCCCCEEEEeEccCCC------------CCHHHHHHHHHh
Q psy15838 268 ASHCFLVTADGSFDCQGNPGEQEILVGKLHYREVQIALSLLHNGGNLVIKIFTIFE------------SDTICLMYLLAC 335 (399)
Q Consensus 268 ~~~vDLV~ADGs~d~sg~~~~qe~~s~~L~~~el~~Al~~Lr~GG~fVlK~F~~~e------------~~t~~Ll~lL~~ 335 (399)
.+.+|+|++.+....... +. ....+.-+.++|++||.+|+-+..... .....+..+|..
T Consensus 100 ~~~fD~v~~~~~l~~~~~----~~-----~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 170 (211)
T 3e23_A 100 IDAYDAVWAHACLLHVPR----DE-----LADVLKLIWRALKPGGLFYASYKSGEGEGRDKLARYYNYPSEEWLRARYAE 170 (211)
T ss_dssp CSCEEEEEECSCGGGSCH----HH-----HHHHHHHHHHHEEEEEEEEEEEECCSSCEECTTSCEECCCCHHHHHHHHHH
T ss_pred CCcEEEEEecCchhhcCH----HH-----HHHHHHHHHHhcCCCcEEEEEEcCCCcccccccchhccCCCHHHHHHHHHh
Confidence 457999999876643321 11 122344556799999999998665431 134567777776
Q ss_pred c--CCeeeeecCCC-CCCCCceEEEEEeeccCCccc
Q psy15838 336 L--FTSVDLFKPAT-SKEGNSEIYVICRDFHSVCSQ 368 (399)
Q Consensus 336 ~--F~~V~v~KP~a-SR~~sSE~YlVc~gf~g~~~~ 368 (399)
. |+-+.+..-.. .-.++.+.++.+...++...+
T Consensus 171 aG~f~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~ 206 (211)
T 3e23_A 171 AGTWASVAVESSEGKGFDQELAQFLHVSVRKPELEH 206 (211)
T ss_dssp HCCCSEEEEEEEEEECTTSCEEEEEEEEEECCCC--
T ss_pred CCCcEEEEEEeccCCCCCCCCceEEEEEEecCcccc
Confidence 5 99888775333 334456677777777666554
No 46
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=96.34 E-value=0.0051 Score=57.00 Aligned_cols=130 Identities=13% Similarity=0.112 Sum_probs=69.1
Q ss_pred eEEEeccCCChhHHHHHHhhhccCCCCccceeccccCCCcCCCCCCcEEeccccccccCccccCCCccccCCCChHHHHH
Q psy15838 167 TSIHLCEAPGAFITSLNHYLKLHHPRMQWDWIANTLNPHYEGNSFDEMISDDRLILGTHRKWYFGPDNTGNILVQNFVSH 246 (399)
Q Consensus 167 ~vlDLceaPGgFsqaln~yl~~~~~~~~w~~~a~sLnP~~e~n~~~~vI~dD~~~~~~~~~w~~G~d~tGDI~~~~~i~~ 246 (399)
+|||||||+|+++..+.+.+..-.+ ..+.+|++++|..-... + ...++.. ...||+.+...+..
T Consensus 84 ~VLDiG~GtG~~t~~la~~~~~~~~--~~~V~gvD~s~~~l~~a--------~---~~~~~v~---~~~gD~~~~~~l~~ 147 (236)
T 2bm8_A 84 TIVELGVYNGGSLAWFRDLTKIMGI--DCQVIGIDRDLSRCQIP--------A---SDMENIT---LHQGDCSDLTTFEH 147 (236)
T ss_dssp EEEEECCTTSHHHHHHHHHHHHTTC--CCEEEEEESCCTTCCCC--------G---GGCTTEE---EEECCSSCSGGGGG
T ss_pred EEEEEeCCCCHHHHHHHHhhhhcCC--CCEEEEEeCChHHHHHH--------h---ccCCceE---EEECcchhHHHHHh
Confidence 9999999999999977665321111 12456676665320000 0 0001111 26788876432111
Q ss_pred HHHhhhhhhccCCCCCCCCCCCCcccEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHh-ccCCCCEEEEeEc----cC
Q psy15838 247 FKQHIGFLLIHDTSLAPHCTHASHCFLVTADGSFDCQGNPGEQEILVGKLHYREVQIALS-LLHNGGNLVIKIF----TI 321 (399)
Q Consensus 247 i~~~v~~~~~~~~~~~~~~~~~~~vDLV~ADGs~d~sg~~~~qe~~s~~L~~~el~~Al~-~Lr~GG~fVlK~F----~~ 321 (399)
+ ...++|+|++|++.. +. ...+..+.. +|++||.+|+-.+ ..
T Consensus 148 ~-------------------~~~~fD~I~~d~~~~-----~~---------~~~l~~~~r~~LkpGG~lv~~d~~~~~~~ 194 (236)
T 2bm8_A 148 L-------------------REMAHPLIFIDNAHA-----NT---------FNIMKWAVDHLLEEGDYFIIEDMIPYWYR 194 (236)
T ss_dssp G-------------------SSSCSSEEEEESSCS-----SH---------HHHHHHHHHHTCCTTCEEEECSCHHHHHH
T ss_pred h-------------------ccCCCCEEEECCchH-----hH---------HHHHHHHHHhhCCCCCEEEEEeCcccccc
Confidence 0 123699999998731 11 123344554 9999999999432 12
Q ss_pred CCCCHHHHHHHHHh---cCCeeeeecCCC
Q psy15838 322 FESDTICLMYLLAC---LFTSVDLFKPAT 347 (399)
Q Consensus 322 ~e~~t~~Ll~lL~~---~F~~V~v~KP~a 347 (399)
+. ...+...+.. .|..+.+++|..
T Consensus 195 ~~--~~~~~~~l~~~~~~f~~~~~~~~~~ 221 (236)
T 2bm8_A 195 YA--PQLFSEYLGAFRDVLSMDMLYANAS 221 (236)
T ss_dssp HC--HHHHHHHHHTTTTTEEEETTTTTSC
T ss_pred cC--HHHHHHHHHhCcccEEEcchhhccc
Confidence 11 2244444444 355555555544
No 47
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=96.28 E-value=0.11 Score=45.40 Aligned_cols=86 Identities=13% Similarity=-0.009 Sum_probs=53.1
Q ss_pred CCcccEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHhccCCCCEEEEeEccCCC-------------CCHHHHHHHHH
Q psy15838 268 ASHCFLVTADGSFDCQGNPGEQEILVGKLHYREVQIALSLLHNGGNLVIKIFTIFE-------------SDTICLMYLLA 334 (399)
Q Consensus 268 ~~~vDLV~ADGs~d~sg~~~~qe~~s~~L~~~el~~Al~~Lr~GG~fVlK~F~~~e-------------~~t~~Ll~lL~ 334 (399)
.+.+|+|++.+........+.. ..+.-+..+|+|||.+|+-.+.... .....+..+|.
T Consensus 100 ~~~fD~v~~~~~l~~~~~~~~~---------~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 170 (203)
T 3h2b_A 100 PKRWAGLLAWYSLIHMGPGELP---------DALVALRMAVEDGGGLLMSFFSGPSLEPMYHPVATAYRWPLPELAQALE 170 (203)
T ss_dssp CCCEEEEEEESSSTTCCTTTHH---------HHHHHHHHTEEEEEEEEEEEECCSSCEEECCSSSCEEECCHHHHHHHHH
T ss_pred CCCeEEEEehhhHhcCCHHHHH---------HHHHHHHHHcCCCcEEEEEEccCCchhhhhchhhhhccCCHHHHHHHHH
Confidence 3579999998876544321221 2334456899999999998866532 22466777776
Q ss_pred hc-CCeeeeecCCCCCCCCceEEEEEeeccCCc
Q psy15838 335 CL-FTSVDLFKPATSKEGNSEIYVICRDFHSVC 366 (399)
Q Consensus 335 ~~-F~~V~v~KP~aSR~~sSE~YlVc~gf~g~~ 366 (399)
.. |+-+.+..-.. ....|++........
T Consensus 171 ~~Gf~~~~~~~~~~----~p~~~l~~~~~~~~~ 199 (203)
T 3h2b_A 171 TAGFQVTSSHWDPR----FPHAYLTAEASLEHH 199 (203)
T ss_dssp HTTEEEEEEEECTT----SSEEEEEEEECC---
T ss_pred HCCCcEEEEEecCC----Ccchhhhhhhhhhhh
Confidence 65 77666654322 566777777666544
No 48
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=96.28 E-value=0.053 Score=47.93 Aligned_cols=59 Identities=15% Similarity=0.004 Sum_probs=38.4
Q ss_pred CcccEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHhccCCCCEEEEeEccCCCCCHHHHHHHHHhc-CCeeeeec
Q psy15838 269 SHCFLVTADGSFDCQGNPGEQEILVGKLHYREVQIALSLLHNGGNLVIKIFTIFESDTICLMYLLACL-FTSVDLFK 344 (399)
Q Consensus 269 ~~vDLV~ADGs~d~sg~~~~qe~~s~~L~~~el~~Al~~Lr~GG~fVlK~F~~~e~~t~~Ll~lL~~~-F~~V~v~K 344 (399)
..+|+|++++... +. ...+..+..+|++||.+|+-..... ....+...+... | .+.+..
T Consensus 107 ~~~D~i~~~~~~~-----~~---------~~~l~~~~~~LkpgG~l~~~~~~~~--~~~~~~~~l~~~g~-~~~~~~ 166 (204)
T 3e05_A 107 PDPDRVFIGGSGG-----ML---------EEIIDAVDRRLKSEGVIVLNAVTLD--TLTKAVEFLEDHGY-MVEVAC 166 (204)
T ss_dssp CCCSEEEESCCTT-----CH---------HHHHHHHHHHCCTTCEEEEEECBHH--HHHHHHHHHHHTTC-EEEEEE
T ss_pred CCCCEEEECCCCc-----CH---------HHHHHHHHHhcCCCeEEEEEecccc--cHHHHHHHHHHCCC-ceeEEE
Confidence 4699999998653 11 1344557789999999999766642 245566666544 4 554443
No 49
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=96.25 E-value=0.039 Score=48.73 Aligned_cols=81 Identities=16% Similarity=0.206 Sum_probs=52.0
Q ss_pred CCcccEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHhccCCCCEEEEeEccCCC------------------------
Q psy15838 268 ASHCFLVTADGSFDCQGNPGEQEILVGKLHYREVQIALSLLHNGGNLVIKIFTIFE------------------------ 323 (399)
Q Consensus 268 ~~~vDLV~ADGs~d~sg~~~~qe~~s~~L~~~el~~Al~~Lr~GG~fVlK~F~~~e------------------------ 323 (399)
..++|+|++..... .++.+ ..+..+..+|+|||.+|+-.+....
T Consensus 114 ~~~fD~v~~~~~l~---~~~~~---------~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (227)
T 3e8s_A 114 GKDYDLICANFALL---HQDII---------ELLSAMRTLLVPGGALVIQTLHPWSVADGDYQDGWREESFAGFAGDWQP 181 (227)
T ss_dssp CCCEEEEEEESCCC---SSCCH---------HHHHHHHHTEEEEEEEEEEECCTTTTCTTCCSCEEEEECCTTSSSCCCC
T ss_pred CCCccEEEECchhh---hhhHH---------HHHHHHHHHhCCCeEEEEEecCccccCccccccccchhhhhccccCccc
Confidence 34699999988776 22222 2334456799999999998753211
Q ss_pred -----CCHHHHHHHHHhc-CCeeeeecCCCCCCCC-ceEEEEEe
Q psy15838 324 -----SDTICLMYLLACL-FTSVDLFKPATSKEGN-SEIYVICR 360 (399)
Q Consensus 324 -----~~t~~Ll~lL~~~-F~~V~v~KP~aSR~~s-SE~YlVc~ 360 (399)
.....+..+|... |+-+.+..|.....+. ..+++|++
T Consensus 182 ~~~~~~~~~~~~~~l~~aGf~~~~~~~~~~~~~~~~~~~~~va~ 225 (227)
T 3e8s_A 182 MPWYFRTLASWLNALDMAGLRLVSLQEPQHPQSAVPQSLLMVAE 225 (227)
T ss_dssp EEEEECCHHHHHHHHHHTTEEEEEEECCCCTTCSSCSCEEEEEE
T ss_pred ceEEEecHHHHHHHHHHcCCeEEEEecCCCCCCCCceeEEEEee
Confidence 1345677766654 8888887766554432 34677775
No 50
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=96.18 E-value=0.039 Score=48.31 Aligned_cols=52 Identities=15% Similarity=0.112 Sum_probs=32.6
Q ss_pred CcccEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHhccCCCCEEEEeEccCC
Q psy15838 269 SHCFLVTADGSFDCQGNPGEQEILVGKLHYREVQIALSLLHNGGNLVIKIFTIF 322 (399)
Q Consensus 269 ~~vDLV~ADGs~d~sg~~~~qe~~s~~L~~~el~~Al~~Lr~GG~fVlK~F~~~ 322 (399)
..+|+|++|...-..+....... .......+.-+..+|++||.+++-.|.+.
T Consensus 92 ~~fD~v~~~~~~~~~~~~~~~~~--~~~~~~~l~~~~~~Lk~gG~l~~~~~~~~ 143 (197)
T 3eey_A 92 CPVKAVMFNLGYLPSGDHSISTR--PETTIQALSKAMELLVTGGIITVVIYYGG 143 (197)
T ss_dssp SCEEEEEEEESBCTTSCTTCBCC--HHHHHHHHHHHHHHEEEEEEEEEEECCBT
T ss_pred CCceEEEEcCCcccCcccccccC--cccHHHHHHHHHHhCcCCCEEEEEEccCC
Confidence 57999999976522221111000 01122356677889999999999998764
No 51
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=96.15 E-value=0.0034 Score=61.71 Aligned_cols=86 Identities=14% Similarity=0.064 Sum_probs=54.4
Q ss_pred CcccEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHhccCCCCEEEEeEccCCC-CCHHHHHHHHHhcCCeeeeec-CC
Q psy15838 269 SHCFLVTADGSFDCQGNPGEQEILVGKLHYREVQIALSLLHNGGNLVIKIFTIFE-SDTICLMYLLACLFTSVDLFK-PA 346 (399)
Q Consensus 269 ~~vDLV~ADGs~d~sg~~~~qe~~s~~L~~~el~~Al~~Lr~GG~fVlK~F~~~e-~~t~~Ll~lL~~~F~~V~v~K-P~ 346 (399)
+.+|+|++|..... +.+.. ..+ ..-+..+...|++||.||+-...... .....++..|...|..|.++. |.
T Consensus 158 ~~fDvIi~D~~~~~-~~~~~--L~t----~efl~~~~r~LkpgGvlv~~~~~~~~~~~~~~~~~tL~~vF~~v~~~~~~~ 230 (317)
T 3gjy_A 158 ASRDVIIRDVFAGA-ITPQN--FTT----VEFFEHCHRGLAPGGLYVANCGDHSDLRGAKSELAGMMEVFEHVAVIADPP 230 (317)
T ss_dssp TCEEEEEECCSTTS-CCCGG--GSB----HHHHHHHHHHEEEEEEEEEEEEECTTCHHHHHHHHHHHHHCSEEEEEECHH
T ss_pred CCCCEEEECCCCcc-ccchh--hhH----HHHHHHHHHhcCCCcEEEEEecCCcchHHHHHHHHHHHHHCCceEEEEecC
Confidence 57999999975432 22211 111 12233456899999999999876432 124578889999999999986 33
Q ss_pred CCCCC-CceEEEEEee
Q psy15838 347 TSKEG-NSEIYVICRD 361 (399)
Q Consensus 347 aSR~~-sSE~YlVc~g 361 (399)
.++.. ..-+.++|..
T Consensus 231 ~~~g~~~gN~Vl~As~ 246 (317)
T 3gjy_A 231 MLKGRRYGNIILMGSD 246 (317)
T ss_dssp HHTTSSCEEEEEEEES
T ss_pred CCCCCcCceEEEEEEC
Confidence 34432 2345566754
No 52
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=96.13 E-value=0.0013 Score=56.77 Aligned_cols=62 Identities=18% Similarity=0.208 Sum_probs=42.0
Q ss_pred CcccEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHhccCCCCEEEEeEccCCCCCHHHHHHHHHhc-CCeeeeecCCC
Q psy15838 269 SHCFLVTADGSFDCQGNPGEQEILVGKLHYREVQIALSLLHNGGNLVIKIFTIFESDTICLMYLLACL-FTSVDLFKPAT 347 (399)
Q Consensus 269 ~~vDLV~ADGs~d~sg~~~~qe~~s~~L~~~el~~Al~~Lr~GG~fVlK~F~~~e~~t~~Ll~lL~~~-F~~V~v~KP~a 347 (399)
..+|+|++++... .. ...+..+..+|++||.+++-.+.. .....+...+... | ++.+.+...
T Consensus 99 ~~~D~v~~~~~~~-----~~---------~~~l~~~~~~l~~gG~l~~~~~~~--~~~~~~~~~l~~~g~-~~~~~~~~~ 161 (192)
T 1l3i_A 99 PDIDIAVVGGSGG-----EL---------QEILRIIKDKLKPGGRIIVTAILL--ETKFEAMECLRDLGF-DVNITELNI 161 (192)
T ss_dssp CCEEEEEESCCTT-----CH---------HHHHHHHHHTEEEEEEEEEEECBH--HHHHHHHHHHHHTTC-CCEEEEEEE
T ss_pred CCCCEEEECCchH-----HH---------HHHHHHHHHhcCCCcEEEEEecCc--chHHHHHHHHHHCCC-ceEEEEEEc
Confidence 3699999987642 11 233455678999999999988765 2356677777765 7 666655443
No 53
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=96.05 E-value=0.022 Score=51.05 Aligned_cols=35 Identities=14% Similarity=0.073 Sum_probs=24.9
Q ss_pred CcccEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHhccCCCCEEEEe
Q psy15838 269 SHCFLVTADGSFDCQGNPGEQEILVGKLHYREVQIALSLLHNGGNLVIK 317 (399)
Q Consensus 269 ~~vDLV~ADGs~d~sg~~~~qe~~s~~L~~~el~~Al~~Lr~GG~fVlK 317 (399)
+.+|+|++|+... .. ...+..+..+|+|||.+|+-
T Consensus 132 ~~fD~v~~d~~~~-----~~---------~~~l~~~~~~L~pgG~lv~~ 166 (223)
T 3duw_A 132 EPFDFIFIDADKQ-----NN---------PAYFEWALKLSRPGTVIIGD 166 (223)
T ss_dssp CCCSEEEECSCGG-----GH---------HHHHHHHHHTCCTTCEEEEE
T ss_pred CCcCEEEEcCCcH-----HH---------HHHHHHHHHhcCCCcEEEEe
Confidence 4699999998732 11 12344566899999999885
No 54
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=96.01 E-value=0.0066 Score=55.22 Aligned_cols=20 Identities=20% Similarity=0.220 Sum_probs=16.7
Q ss_pred ceEEEeccCCChhHHHHHHh
Q psy15838 166 FTSIHLCEAPGAFITSLNHY 185 (399)
Q Consensus 166 ~~vlDLceaPGgFsqaln~y 185 (399)
.+|||||||+|.++..+...
T Consensus 59 ~~VLDlGcGtG~~~~~la~~ 78 (210)
T 1nt2_A 59 ERVLYLGAASGTTVSHLADI 78 (210)
T ss_dssp CEEEEETCTTSHHHHHHHHH
T ss_pred CEEEEECCcCCHHHHHHHHH
Confidence 49999999999998866554
No 55
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=95.95 E-value=0.084 Score=46.41 Aligned_cols=73 Identities=10% Similarity=-0.062 Sum_probs=38.6
Q ss_pred CcccEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHhccCCCCEEEEeEccCCCCCHHHHHHHHHhcCCeeeeecCCCC
Q psy15838 269 SHCFLVTADGSFDCQGNPGEQEILVGKLHYREVQIALSLLHNGGNLVIKIFTIFESDTICLMYLLACLFTSVDLFKPATS 348 (399)
Q Consensus 269 ~~vDLV~ADGs~d~sg~~~~qe~~s~~L~~~el~~Al~~Lr~GG~fVlK~F~~~e~~t~~Ll~lL~~~F~~V~v~KP~aS 348 (399)
+.+|+|++.+.. +. ...+..+..+|+|||.+++=.-.. ....+..++. -|+.+.+..-...
T Consensus 131 ~~~D~i~~~~~~------~~---------~~~l~~~~~~L~~gG~l~~~~~~~---~~~~~~~~~~-g~~~~~~~~~~~~ 191 (207)
T 1jsx_A 131 PPFDGVISRAFA------SL---------NDMVSWCHHLPGEQGRFYALKGQM---PEDEIALLPE-EYQVESVVKLQVP 191 (207)
T ss_dssp SCEEEEECSCSS------SH---------HHHHHHHTTSEEEEEEEEEEESSC---CHHHHHTSCT-TEEEEEEEEEECC
T ss_pred CCcCEEEEeccC------CH---------HHHHHHHHHhcCCCcEEEEEeCCC---chHHHHHHhc-CCceeeeeeeccC
Confidence 469999986531 11 133455678999999998853221 2333333333 5655553322222
Q ss_pred CCCCceEEEEEe
Q psy15838 349 KEGNSEIYVICR 360 (399)
Q Consensus 349 R~~sSE~YlVc~ 360 (399)
.......+++++
T Consensus 192 ~~~~~~~~~~~~ 203 (207)
T 1jsx_A 192 ALDGERHLVVIK 203 (207)
T ss_dssp --CCEEEEEEEE
T ss_pred CCCCceEEEEEE
Confidence 333444555554
No 56
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=95.90 E-value=0.049 Score=46.43 Aligned_cols=53 Identities=19% Similarity=0.090 Sum_probs=35.5
Q ss_pred CcccEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHhccCCCCEEEEeEccCCCCCHHHHHHHHHhcCC
Q psy15838 269 SHCFLVTADGSFDCQGNPGEQEILVGKLHYREVQIALSLLHNGGNLVIKIFTIFESDTICLMYLLACLFT 338 (399)
Q Consensus 269 ~~vDLV~ADGs~d~sg~~~~qe~~s~~L~~~el~~Al~~Lr~GG~fVlK~F~~~e~~t~~Ll~lL~~~F~ 338 (399)
..+|+|++++.... ...+..+..+|++||.+|+-.+... ....+...+...-.
T Consensus 93 ~~~D~i~~~~~~~~---------------~~~l~~~~~~L~~gG~l~~~~~~~~--~~~~~~~~~~~~~~ 145 (178)
T 3hm2_A 93 DNPDVIFIGGGLTA---------------PGVFAAAWKRLPVGGRLVANAVTVE--SEQMLWALRKQFGG 145 (178)
T ss_dssp SCCSEEEECC-TTC---------------TTHHHHHHHTCCTTCEEEEEECSHH--HHHHHHHHHHHHCC
T ss_pred CCCCEEEECCcccH---------------HHHHHHHHHhcCCCCEEEEEeeccc--cHHHHHHHHHHcCC
Confidence 57999999887642 2233446679999999998887662 24556666665543
No 57
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=95.88 E-value=0.014 Score=51.85 Aligned_cols=69 Identities=14% Similarity=0.141 Sum_probs=43.6
Q ss_pred CCcccEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHhccCCCCEEEEeE--------ccCCCCCHHHHHHHHHhcCCe
Q psy15838 268 ASHCFLVTADGSFDCQGNPGEQEILVGKLHYREVQIALSLLHNGGNLVIKI--------FTIFESDTICLMYLLACLFTS 339 (399)
Q Consensus 268 ~~~vDLV~ADGs~d~sg~~~~qe~~s~~L~~~el~~Al~~Lr~GG~fVlK~--------F~~~e~~t~~Ll~lL~~~F~~ 339 (399)
.+.+|+|++.+....-.++ + .....+.-+..+|++||.+|+-. +.. ......++..+...+..
T Consensus 112 ~~~fD~v~~~~~l~~~~~~--~------~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 182 (216)
T 3ofk_A 112 AELFDLIVVAEVLYYLEDM--T------QMRTAIDNMVKMLAPGGHLVFGSARDATCRRWGH-VAGAETVITILTEALTE 182 (216)
T ss_dssp SCCEEEEEEESCGGGSSSH--H------HHHHHHHHHHHTEEEEEEEEEEEECHHHHHHTTC-SCCHHHHHHHHHHHSEE
T ss_pred CCCccEEEEccHHHhCCCH--H------HHHHHHHHHHHHcCCCCEEEEEecCCCcchhhhh-hhhHHHHHHHHHhhccc
Confidence 3579999998765533221 1 12234555678999999999854 222 12355667778777887
Q ss_pred eeeecC
Q psy15838 340 VDLFKP 345 (399)
Q Consensus 340 V~v~KP 345 (399)
+..+..
T Consensus 183 ~e~~~~ 188 (216)
T 3ofk_A 183 VERVQC 188 (216)
T ss_dssp EEEEEE
T ss_pred eEEEec
Confidence 765554
No 58
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=95.84 E-value=0.02 Score=51.95 Aligned_cols=108 Identities=11% Similarity=-0.012 Sum_probs=63.9
Q ss_pred ceEEEeccCCChhHHHHHHhhhccCCCCccceeccccCCCcCCCCCCcEEec--cccccccCccccCCCccccCCCChHH
Q psy15838 166 FTSIHLCEAPGAFITSLNHYLKLHHPRMQWDWIANTLNPHYEGNSFDEMISD--DRLILGTHRKWYFGPDNTGNILVQNF 243 (399)
Q Consensus 166 ~~vlDLceaPGgFsqaln~yl~~~~~~~~w~~~a~sLnP~~e~n~~~~vI~d--D~~~~~~~~~w~~G~d~tGDI~~~~~ 243 (399)
.+|||||||+|.++..+..... +.+|++++|. ++.. .+. ...+.. ...||+.+...
T Consensus 58 ~~vLD~GcG~G~~~~~la~~~~--------~v~gvD~s~~--------~~~~a~~~~---~~~~~~---~~~~d~~~~~~ 115 (245)
T 3ggd_A 58 LPLIDFACGNGTQTKFLSQFFP--------RVIGLDVSKS--------ALEIAAKEN---TAANIS---YRLLDGLVPEQ 115 (245)
T ss_dssp SCEEEETCTTSHHHHHHHHHSS--------CEEEEESCHH--------HHHHHHHHS---CCTTEE---EEECCTTCHHH
T ss_pred CeEEEEcCCCCHHHHHHHHhCC--------CEEEEECCHH--------HHHHHHHhC---cccCce---EEECccccccc
Confidence 4899999999999987655321 3556665442 1100 000 000000 26889988655
Q ss_pred HHHHHHhhhhhhccCCCCCCCCCCCCcccEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHhccCCCCEEEEeEccCC
Q psy15838 244 VSHFKQHIGFLLIHDTSLAPHCTHASHCFLVTADGSFDCQGNPGEQEILVGKLHYREVQIALSLLHNGGNLVIKIFTIF 322 (399)
Q Consensus 244 i~~i~~~v~~~~~~~~~~~~~~~~~~~vDLV~ADGs~d~sg~~~~qe~~s~~L~~~el~~Al~~Lr~GG~fVlK~F~~~ 322 (399)
...+.. ...+|+|++.+........+.+ ..+.-+..+|+|||.+++--+...
T Consensus 116 ~~~~~~------------------~~~~d~v~~~~~~~~~~~~~~~---------~~l~~~~~~LkpgG~l~i~~~~~~ 167 (245)
T 3ggd_A 116 AAQIHS------------------EIGDANIYMRTGFHHIPVEKRE---------LLGQSLRILLGKQGAMYLIELGTG 167 (245)
T ss_dssp HHHHHH------------------HHCSCEEEEESSSTTSCGGGHH---------HHHHHHHHHHTTTCEEEEEEECTT
T ss_pred cccccc------------------ccCccEEEEcchhhcCCHHHHH---------HHHHHHHHHcCCCCEEEEEeCCcc
Confidence 544332 1249999999887655322221 223345678999999998877653
No 59
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=95.80 E-value=0.17 Score=46.11 Aligned_cols=57 Identities=21% Similarity=0.106 Sum_probs=37.8
Q ss_pred CcccEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHhccCCCCEEEEeEccCCCCCHHHHHHHHHhc---CCeeeee
Q psy15838 269 SHCFLVTADGSFDCQGNPGEQEILVGKLHYREVQIALSLLHNGGNLVIKIFTIFESDTICLMYLLACL---FTSVDLF 343 (399)
Q Consensus 269 ~~vDLV~ADGs~d~sg~~~~qe~~s~~L~~~el~~Al~~Lr~GG~fVlK~F~~~e~~t~~Ll~lL~~~---F~~V~v~ 343 (399)
..+|+|++|... .. ..+.-+..+|++||.+++=.... .....+...|... |..+.++
T Consensus 161 ~~~D~v~~~~~~-------~~---------~~l~~~~~~L~~gG~l~~~~~~~--~~~~~~~~~l~~~g~~f~~~~~~ 220 (255)
T 3mb5_A 161 ENVDHVILDLPQ-------PE---------RVVEHAAKALKPGGFFVAYTPCS--NQVMRLHEKLREFKDYFMKPRTI 220 (255)
T ss_dssp CSEEEEEECSSC-------GG---------GGHHHHHHHEEEEEEEEEEESSH--HHHHHHHHHHHHTGGGBSCCEEE
T ss_pred CCcCEEEECCCC-------HH---------HHHHHHHHHcCCCCEEEEEECCH--HHHHHHHHHHHHcCCCccccEEE
Confidence 469999997531 11 12445678999999999865443 2345566667665 8887765
No 60
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=95.78 E-value=0.012 Score=54.74 Aligned_cols=34 Identities=15% Similarity=0.026 Sum_probs=23.0
Q ss_pred ceEEEeccCCChhHHHHHHhhhccCCCCccceeccccCC
Q psy15838 166 FTSIHLCEAPGAFITSLNHYLKLHHPRMQWDWIANTLNP 204 (399)
Q Consensus 166 ~~vlDLceaPGgFsqaln~yl~~~~~~~~w~~~a~sLnP 204 (399)
.++||||||+|.++.++...+.. ....++++++|
T Consensus 62 ~~VLDiG~G~G~~t~~la~~~~~-----~~~v~~iD~~~ 95 (242)
T 3r3h_A 62 KKVLELGTFTGYSALAMSLALPD-----DGQVITCDINE 95 (242)
T ss_dssp SEEEEEESCCSHHHHHHHHTSCT-----TCEEEEEECCC
T ss_pred CEEEEeeCCcCHHHHHHHHhCCC-----CCEEEEEECCH
Confidence 39999999999998866554321 12456666655
No 61
>3iyl_W VP1; non-enveloped virus, membrane penetration protein, autocleav myristol group, icosahedral virus; HET: MYR; 3.30A {Grass carp reovirus} PDB: 3k1q_A
Probab=95.73 E-value=0.021 Score=64.11 Aligned_cols=95 Identities=20% Similarity=0.140 Sum_probs=75.9
Q ss_pred CCcccEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHhccCCCCEEEEeEccCCCCCHHHHHHHHHhcCCeeeeecCCC
Q psy15838 268 ASHCFLVTADGSFDCQGNPGEQEILVGKLHYREVQIALSLLHNGGNLVIKIFTIFESDTICLMYLLACLFTSVDLFKPAT 347 (399)
Q Consensus 268 ~~~vDLV~ADGs~d~sg~~~~qe~~s~~L~~~el~~Al~~Lr~GG~fVlK~F~~~e~~t~~Ll~lL~~~F~~V~v~KP~a 347 (399)
-+.+.+|=||----..|..+.. .+.++..+++..|+++..+||++|+|+=---...-..|+..+...|..+++.||--
T Consensus 572 TGtf~fVYSDVDQV~d~~~Dl~--As~r~~~~~l~~~l~~ts~GG~~v~KiNFPT~~vw~~if~~~~~~~~~~~i~KPli 649 (1299)
T 3iyl_W 572 TGTFGLVYADLDQVEDAGTDMP--AANRAAIAMLGTALQMTTAGGVSVLKVNFPTRAFWTQVFNLYATHATTLHLVKPTI 649 (1299)
T ss_dssp CCCEEEEEECCCCC-----CCH--HHHHHHHHHHHHHHHHEEEEEEEEEEESCCCTTHHHHHHHHTTTTCSCEEEEECCS
T ss_pred CCceEEEEecchhhccCCcchh--hhhHHHHHHHHHHHHhhcCCceEEEEEcCCchHHHHHHHHHhcchhheeeeeccee
Confidence 4679999999876555544444 67899999999999999999999999966544566778889999999999999976
Q ss_pred CCCCCceEEEEEeeccCCc
Q psy15838 348 SKEGNSEIYVICRDFHSVC 366 (399)
Q Consensus 348 SR~~sSE~YlVc~gf~g~~ 366 (399)
+ .|.|+|+|..+.....
T Consensus 650 ~--NnvEvf~v~~~r~~~~ 666 (1299)
T 3iyl_W 650 V--NSSEVFLVFGGRQSNG 666 (1299)
T ss_dssp S--SCCCEEEEESCCCTTC
T ss_pred e--cceEEEEEEeeecccC
Confidence 4 6899999998877433
No 62
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=95.71 E-value=0.0094 Score=56.45 Aligned_cols=59 Identities=8% Similarity=-0.119 Sum_probs=38.9
Q ss_pred CcccEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHhccCCCCEEEEeEccC----CCCCHHHHHHHHHhcCCeeee
Q psy15838 269 SHCFLVTADGSFDCQGNPGEQEILVGKLHYREVQIALSLLHNGGNLVIKIFTI----FESDTICLMYLLACLFTSVDL 342 (399)
Q Consensus 269 ~~vDLV~ADGs~d~sg~~~~qe~~s~~L~~~el~~Al~~Lr~GG~fVlK~F~~----~e~~t~~Ll~lL~~~F~~V~v 342 (399)
..+|+|++|..... ...+..+..+|+|||.+++-.+.. .......+...+...--++.+
T Consensus 191 ~~fD~Vi~~~p~~~---------------~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~i~~~~~~~G~~~~~ 253 (278)
T 2frn_A 191 NIADRILMGYVVRT---------------HEFIPKALSIAKDGAIIHYHNTVPEKLMPREPFETFKRITKEYGYDVEK 253 (278)
T ss_dssp SCEEEEEECCCSSG---------------GGGHHHHHHHEEEEEEEEEEEEEEGGGTTTTTHHHHHHHHHHTTCEEEE
T ss_pred CCccEEEECCchhH---------------HHHHHHHHHHCCCCeEEEEEEeeccccccccHHHHHHHHHHHcCCeeEE
Confidence 46999999855321 112335677999999999988763 133455666667666556665
No 63
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=95.69 E-value=0.08 Score=49.89 Aligned_cols=49 Identities=14% Similarity=0.158 Sum_probs=32.4
Q ss_pred CcccEEEecCCCCCCCCC----chhHHHHHHHHHHHHHHHHhccCCCCEEEEeEccCCC
Q psy15838 269 SHCFLVTADGSFDCQGNP----GEQEILVGKLHYREVQIALSLLHNGGNLVIKIFTIFE 323 (399)
Q Consensus 269 ~~vDLV~ADGs~d~sg~~----~~qe~~s~~L~~~el~~Al~~Lr~GG~fVlK~F~~~e 323 (399)
+.+|+|++.+....-.++ +.+ -....+.-+..+|+|||.+|+-.+....
T Consensus 136 ~~fD~v~~~~~~~~~~d~~~~~~~~------~~~~~l~~~~~~LkpgG~l~i~~~~~~~ 188 (302)
T 3hem_A 136 EPVDRIVSLGAFEHFADGAGDAGFE------RYDTFFKKFYNLTPDDGRMLLHTITIPD 188 (302)
T ss_dssp CCCSEEEEESCGGGTTCCSSCCCTT------HHHHHHHHHHHSSCTTCEEEEEEEECCC
T ss_pred CCccEEEEcchHHhcCccccccchh------HHHHHHHHHHHhcCCCcEEEEEEEeccC
Confidence 469999998876554332 111 1123344567899999999998887643
No 64
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=95.65 E-value=0.13 Score=45.44 Aligned_cols=78 Identities=8% Similarity=-0.114 Sum_probs=48.1
Q ss_pred CCcccEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHhccCCCCEEEEeEccCCC----------CCHHHHHHHHHhc-
Q psy15838 268 ASHCFLVTADGSFDCQGNPGEQEILVGKLHYREVQIALSLLHNGGNLVIKIFTIFE----------SDTICLMYLLACL- 336 (399)
Q Consensus 268 ~~~vDLV~ADGs~d~sg~~~~qe~~s~~L~~~el~~Al~~Lr~GG~fVlK~F~~~e----------~~t~~Ll~lL~~~- 336 (399)
.+.+|+|++.+...... +. ...+.-+..+|++||.+|+-.+.... .....+..+|...
T Consensus 104 ~~~fD~v~~~~~l~~~~--~~---------~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G 172 (219)
T 3dh0_A 104 DNTVDFIFMAFTFHELS--EP---------LKFLEELKRVAKPFAYLAIIDWKKEERDKGPPPEEVYSEWEVGLILEDAG 172 (219)
T ss_dssp SSCEEEEEEESCGGGCS--SH---------HHHHHHHHHHEEEEEEEEEEEECSSCCSSSCCGGGSCCHHHHHHHHHHTT
T ss_pred CCCeeEEEeehhhhhcC--CH---------HHHHHHHHHHhCCCeEEEEEEecccccccCCchhcccCHHHHHHHHHHCC
Confidence 35799999987765332 11 22344566789999999997655321 1245677777765
Q ss_pred CCeeeeecCCCCCCCCceEEEEEee
Q psy15838 337 FTSVDLFKPATSKEGNSEIYVICRD 361 (399)
Q Consensus 337 F~~V~v~KP~aSR~~sSE~YlVc~g 361 (399)
|+.+.+..-. ..-.+++++.
T Consensus 173 f~~~~~~~~~-----~~~~~~~~~k 192 (219)
T 3dh0_A 173 IRVGRVVEVG-----KYCFGVYAMI 192 (219)
T ss_dssp CEEEEEEEET-----TTEEEEEEEC
T ss_pred CEEEEEEeeC-----CceEEEEEEe
Confidence 8877765432 2345555553
No 65
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=95.60 E-value=0.0023 Score=57.91 Aligned_cols=21 Identities=14% Similarity=0.154 Sum_probs=17.5
Q ss_pred ceEEEeccCCChhHHHHHHhh
Q psy15838 166 FTSIHLCEAPGAFITSLNHYL 186 (399)
Q Consensus 166 ~~vlDLceaPGgFsqaln~yl 186 (399)
.++||+|||+|.++..+...+
T Consensus 75 ~~vLDlG~G~G~~~~~la~~~ 95 (227)
T 1g8a_A 75 KSVLYLGIASGTTASHVSDIV 95 (227)
T ss_dssp CEEEEETTTSTTHHHHHHHHH
T ss_pred CEEEEEeccCCHHHHHHHHHh
Confidence 399999999999998776543
No 66
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=95.57 E-value=0.063 Score=47.61 Aligned_cols=43 Identities=14% Similarity=0.170 Sum_probs=28.9
Q ss_pred CcccEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHhccCCCCEEEEeEcc
Q psy15838 269 SHCFLVTADGSFDCQGNPGEQEILVGKLHYREVQIALSLLHNGGNLVIKIFT 320 (399)
Q Consensus 269 ~~vDLV~ADGs~d~sg~~~~qe~~s~~L~~~el~~Al~~Lr~GG~fVlK~F~ 320 (399)
+.+|+|++.+...... +.+ ....+.-+..+|+|||.+++-...
T Consensus 105 ~~fD~v~~~~~l~~~~--~~~-------~~~~l~~~~~~LkpgG~l~i~~~~ 147 (220)
T 3hnr_A 105 TSIDTIVSTYAFHHLT--DDE-------KNVAIAKYSQLLNKGGKIVFADTI 147 (220)
T ss_dssp SCCSEEEEESCGGGSC--HHH-------HHHHHHHHHHHSCTTCEEEEEEEC
T ss_pred CCeEEEEECcchhcCC--hHH-------HHHHHHHHHHhcCCCCEEEEEecc
Confidence 5799999997765432 111 122344566899999999998643
No 67
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=95.49 E-value=0.011 Score=52.36 Aligned_cols=101 Identities=10% Similarity=-0.085 Sum_probs=58.4
Q ss_pred eEEEeccCCChhHHHHHHhhhccCCCCccceeccccCCCcCCCCCCcEEeccccccccCccccCCCccccCCCChHHHHH
Q psy15838 167 TSIHLCEAPGAFITSLNHYLKLHHPRMQWDWIANTLNPHYEGNSFDEMISDDRLILGTHRKWYFGPDNTGNILVQNFVSH 246 (399)
Q Consensus 167 ~vlDLceaPGgFsqaln~yl~~~~~~~~w~~~a~sLnP~~e~n~~~~vI~dD~~~~~~~~~w~~G~d~tGDI~~~~~i~~ 246 (399)
++||+|||+|.++..+... ..+.+|++++|.. +..-.. ...++.. ...||+.+.
T Consensus 49 ~vLdiG~G~G~~~~~l~~~--------~~~v~~~D~s~~~--------~~~a~~--~~~~~~~---~~~~d~~~~----- 102 (218)
T 3ou2_A 49 DVLELASGTGYWTRHLSGL--------ADRVTALDGSAEM--------IAEAGR--HGLDNVE---FRQQDLFDW----- 102 (218)
T ss_dssp EEEEESCTTSHHHHHHHHH--------SSEEEEEESCHHH--------HHHHGG--GCCTTEE---EEECCTTSC-----
T ss_pred eEEEECCCCCHHHHHHHhc--------CCeEEEEeCCHHH--------HHHHHh--cCCCCeE---EEecccccC-----
Confidence 9999999999999876553 1245566654421 000000 0000000 256776542
Q ss_pred HHHhhhhhhccCCCCCCCCCCCCcccEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHhccCCCCEEEEeEccC
Q psy15838 247 FKQHIGFLLIHDTSLAPHCTHASHCFLVTADGSFDCQGNPGEQEILVGKLHYREVQIALSLLHNGGNLVIKIFTI 321 (399)
Q Consensus 247 i~~~v~~~~~~~~~~~~~~~~~~~vDLV~ADGs~d~sg~~~~qe~~s~~L~~~el~~Al~~Lr~GG~fVlK~F~~ 321 (399)
. ..+.+|+|++........ + ......+.-+..+|+|||.+++-.+..
T Consensus 103 --~-----------------~~~~~D~v~~~~~l~~~~--~-------~~~~~~l~~~~~~L~pgG~l~~~~~~~ 149 (218)
T 3ou2_A 103 --T-----------------PDRQWDAVFFAHWLAHVP--D-------DRFEAFWESVRSAVAPGGVVEFVDVTD 149 (218)
T ss_dssp --C-----------------CSSCEEEEEEESCGGGSC--H-------HHHHHHHHHHHHHEEEEEEEEEEEECC
T ss_pred --C-----------------CCCceeEEEEechhhcCC--H-------HHHHHHHHHHHHHcCCCeEEEEEeCCC
Confidence 0 135799999987654332 1 112334455668999999999987766
No 68
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=95.49 E-value=0.01 Score=59.69 Aligned_cols=65 Identities=18% Similarity=0.046 Sum_probs=39.0
Q ss_pred cccEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHhccCCCCEEEEeEccCCCCCHHHHHHHHHhcC
Q psy15838 270 HCFLVTADGSFDCQGNPGEQEILVGKLHYREVQIALSLLHNGGNLVIKIFTIFESDTICLMYLLACLF 337 (399)
Q Consensus 270 ~vDLV~ADGs~d~sg~~~~qe~~s~~L~~~el~~Al~~Lr~GG~fVlK~F~~~e~~t~~Ll~lL~~~F 337 (399)
.+|+|++|.- ...... .+-....+.....+..|+.+|+|||.+++=..... .....+...+...+
T Consensus 280 ~fD~Ii~dpP-~f~~~~-~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s~~-~~~~~f~~~v~~a~ 344 (393)
T 4dmg_A 280 PFHHVLLDPP-TLVKRP-EELPAMKRHLVDLVREALRLLAEEGFLWLSSCSYH-LRLEDLLEVARRAA 344 (393)
T ss_dssp CEEEEEECCC-CCCSSG-GGHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTT-SCHHHHHHHHHHHH
T ss_pred CCCEEEECCC-cCCCCH-HHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCC-CCHHHHHHHHHHHH
Confidence 3999999943 222221 22223345566677888999999999995544443 12444555555544
No 69
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=95.46 E-value=0.0049 Score=57.96 Aligned_cols=21 Identities=14% Similarity=0.127 Sum_probs=18.0
Q ss_pred ceEEEeccCCChhHHHHHHhh
Q psy15838 166 FTSIHLCEAPGAFITSLNHYL 186 (399)
Q Consensus 166 ~~vlDLceaPGgFsqaln~yl 186 (399)
.+|||||||+|.++..+...+
T Consensus 79 ~~VldlG~G~G~~~~~la~~V 99 (233)
T 4df3_A 79 DRILYLGIASGTTASHMSDII 99 (233)
T ss_dssp CEEEEETCTTSHHHHHHHHHH
T ss_pred CEEEEecCcCCHHHHHHHHHh
Confidence 399999999999999776654
No 70
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=95.45 E-value=0.041 Score=52.22 Aligned_cols=46 Identities=7% Similarity=0.153 Sum_probs=31.8
Q ss_pred CcccEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHhccCCCCEEEEeEccCCC
Q psy15838 269 SHCFLVTADGSFDCQGNPGEQEILVGKLHYREVQIALSLLHNGGNLVIKIFTIFE 323 (399)
Q Consensus 269 ~~vDLV~ADGs~d~sg~~~~qe~~s~~L~~~el~~Al~~Lr~GG~fVlK~F~~~e 323 (399)
+.+|+|++.+.....+.++.. ..+.-+..+|+|||.+|+-.+....
T Consensus 154 ~~fD~v~~~~~l~~~~~~~~~---------~~l~~~~~~LkpgG~l~~~~~~~~~ 199 (318)
T 2fk8_A 154 EPVDRIVSIEAFEHFGHENYD---------DFFKRCFNIMPADGRMTVQSSVSYH 199 (318)
T ss_dssp CCCSEEEEESCGGGTCGGGHH---------HHHHHHHHHSCTTCEEEEEEEECCC
T ss_pred CCcCEEEEeChHHhcCHHHHH---------HHHHHHHHhcCCCcEEEEEEeccCC
Confidence 469999998876654432222 2234456899999999998887643
No 71
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=95.45 E-value=0.22 Score=48.29 Aligned_cols=67 Identities=16% Similarity=0.084 Sum_probs=35.9
Q ss_pred CcccEEEecCCCCCCCC----Cch---------hHHHHHHHHHHHHHHHHhccCCCCEEEEeEccCC-CCCHHHHHHHHH
Q psy15838 269 SHCFLVTADGSFDCQGN----PGE---------QEILVGKLHYREVQIALSLLHNGGNLVIKIFTIF-ESDTICLMYLLA 334 (399)
Q Consensus 269 ~~vDLV~ADGs~d~sg~----~~~---------qe~~s~~L~~~el~~Al~~Lr~GG~fVlK~F~~~-e~~t~~Ll~lL~ 334 (399)
..||.|++|.--.-.|. ++. +-.....+....+..|..+|+ ||.+|.=.-+.. +.....+...|.
T Consensus 173 ~~fD~Vl~D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l~-gG~lvYsTCs~~~~Ene~~v~~~l~ 251 (309)
T 2b9e_A 173 HEVHYILLDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPS-LQRLVYSTCSLCQEENEDVVRDALQ 251 (309)
T ss_dssp TTEEEEEECCCCCC------------------CCHHHHHHHHHHHHHHHTTCTT-CCEEEEEESCCCGGGTHHHHHHHHT
T ss_pred CCCCEEEEcCCcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhccC-CCEEEEECCCCChHHhHHHHHHHHH
Confidence 36999999964433332 111 101123444555667778886 999886555443 223344555666
Q ss_pred hc
Q psy15838 335 CL 336 (399)
Q Consensus 335 ~~ 336 (399)
.+
T Consensus 252 ~~ 253 (309)
T 2b9e_A 252 QN 253 (309)
T ss_dssp TS
T ss_pred hC
Confidence 54
No 72
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=95.45 E-value=0.056 Score=50.35 Aligned_cols=43 Identities=16% Similarity=0.240 Sum_probs=30.3
Q ss_pred CCcccEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHhccCCCCEEEEeEccC
Q psy15838 268 ASHCFLVTADGSFDCQGNPGEQEILVGKLHYREVQIALSLLHNGGNLVIKIFTI 321 (399)
Q Consensus 268 ~~~vDLV~ADGs~d~sg~~~~qe~~s~~L~~~el~~Al~~Lr~GG~fVlK~F~~ 321 (399)
.+.+|+|++.+....-.+ . ...+.-+..+|+|||.+++=.+..
T Consensus 134 ~~~fD~v~~~~~l~~~~~--~---------~~~l~~~~~~LkpgG~l~~~~~~~ 176 (285)
T 4htf_A 134 ETPVDLILFHAVLEWVAD--P---------RSVLQTLWSVLRPGGVLSLMFYNA 176 (285)
T ss_dssp SSCEEEEEEESCGGGCSC--H---------HHHHHHHHHTEEEEEEEEEEEEBH
T ss_pred CCCceEEEECchhhcccC--H---------HHHHHHHHHHcCCCeEEEEEEeCC
Confidence 357999999887654422 2 123445678999999999977654
No 73
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=95.41 E-value=0.14 Score=46.46 Aligned_cols=44 Identities=16% Similarity=0.230 Sum_probs=30.4
Q ss_pred CcccEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHhccCCCCEEEEeEccCCC
Q psy15838 269 SHCFLVTADGSFDCQGNPGEQEILVGKLHYREVQIALSLLHNGGNLVIKIFTIFE 323 (399)
Q Consensus 269 ~~vDLV~ADGs~d~sg~~~~qe~~s~~L~~~el~~Al~~Lr~GG~fVlK~F~~~e 323 (399)
..+|+|++........ +.. ..+.-+..+|+|||.+++-+.....
T Consensus 94 ~~fD~v~~~~~l~~~~--~~~---------~~l~~~~~~L~pgG~l~~~~~~~~~ 137 (259)
T 2p35_A 94 QKADLLYANAVFQWVP--DHL---------AVLSQLMDQLESGGVLAVQMPDNLQ 137 (259)
T ss_dssp SCEEEEEEESCGGGST--THH---------HHHHHHGGGEEEEEEEEEEEECCTT
T ss_pred CCcCEEEEeCchhhCC--CHH---------HHHHHHHHhcCCCeEEEEEeCCCCC
Confidence 4699999977655331 111 2344567899999999998876543
No 74
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=95.40 E-value=0.011 Score=56.76 Aligned_cols=86 Identities=13% Similarity=0.065 Sum_probs=50.1
Q ss_pred CcccEEEecCCCCCCCCCchhHHHHHHH-HHHHHHHHHhccCCCCEEEEeEccCC--CCCHHHHHHHHHhcCCeeeeec-
Q psy15838 269 SHCFLVTADGSFDCQGNPGEQEILVGKL-HYREVQIALSLLHNGGNLVIKIFTIF--ESDTICLMYLLACLFTSVDLFK- 344 (399)
Q Consensus 269 ~~vDLV~ADGs~d~sg~~~~qe~~s~~L-~~~el~~Al~~Lr~GG~fVlK~F~~~--e~~t~~Ll~lL~~~F~~V~v~K- 344 (399)
..+|+|++|......+.. ..| ....+..+...|++||.+|+-.-... ......++..|...|..|.++.
T Consensus 162 ~~fD~Ii~d~~~~~~~~~-------~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~v~~~~~ 234 (296)
T 1inl_A 162 NEFDVIIIDSTDPTAGQG-------GHLFTEEFYQACYDALKEDGVFSAETEDPFYDIGWFKLAYRRISKVFPITRVYLG 234 (296)
T ss_dssp SCEEEEEEEC-----------------CCSHHHHHHHHHHEEEEEEEEEECCCTTTTHHHHHHHHHHHHHHCSEEEEEEE
T ss_pred CCceEEEEcCCCcccCch-------hhhhHHHHHHHHHHhcCCCcEEEEEccCcccCHHHHHHHHHHHHHHCCceEEEEe
Confidence 469999999653201110 001 12223445689999999999643321 1124567778999999998776
Q ss_pred CCCCCCCCceEEEEEee
Q psy15838 345 PATSKEGNSEIYVICRD 361 (399)
Q Consensus 345 P~aSR~~sSE~YlVc~g 361 (399)
+..+-++..-.+++|..
T Consensus 235 ~vp~~p~g~~~f~~as~ 251 (296)
T 1inl_A 235 FMTTYPSGMWSYTFASK 251 (296)
T ss_dssp ECTTSTTSEEEEEEEES
T ss_pred ecCccCCCceEEEEecC
Confidence 22233455567888864
No 75
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=95.38 E-value=0.0091 Score=52.90 Aligned_cols=60 Identities=13% Similarity=0.032 Sum_probs=40.5
Q ss_pred CcccEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHhccCCCCEEEEeEccCCCCCHHHHHHHHHhc-CCeeeeec
Q psy15838 269 SHCFLVTADGSFDCQGNPGEQEILVGKLHYREVQIALSLLHNGGNLVIKIFTIFESDTICLMYLLACL-FTSVDLFK 344 (399)
Q Consensus 269 ~~vDLV~ADGs~d~sg~~~~qe~~s~~L~~~el~~Al~~Lr~GG~fVlK~F~~~e~~t~~Ll~lL~~~-F~~V~v~K 344 (399)
+.+|+|+++.... .....+..+..+|++||.+|+-.+... ....+...+... |+-+.+.+
T Consensus 124 ~~fD~i~~~~~~~--------------~~~~~l~~~~~~L~~gG~l~~~~~~~~--~~~~~~~~~~~~Gf~~~~~~~ 184 (205)
T 3grz_A 124 GKFDLIVANILAE--------------ILLDLIPQLDSHLNEDGQVIFSGIDYL--QLPKIEQALAENSFQIDLKMR 184 (205)
T ss_dssp SCEEEEEEESCHH--------------HHHHHGGGSGGGEEEEEEEEEEEEEGG--GHHHHHHHHHHTTEEEEEEEE
T ss_pred CCceEEEECCcHH--------------HHHHHHHHHHHhcCCCCEEEEEecCcc--cHHHHHHHHHHcCCceEEeec
Confidence 5699999986431 123445567789999999999766553 356677776654 76666544
No 76
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=95.31 E-value=0.027 Score=53.08 Aligned_cols=37 Identities=16% Similarity=0.038 Sum_probs=26.2
Q ss_pred CcccEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHhccCCCCEEEEe
Q psy15838 269 SHCFLVTADGSFDCQGNPGEQEILVGKLHYREVQIALSLLHNGGNLVIK 317 (399)
Q Consensus 269 ~~vDLV~ADGs~d~sg~~~~qe~~s~~L~~~el~~Al~~Lr~GG~fVlK 317 (399)
+.+|+|++....... +. ...+.-+..+|+|||.+++=
T Consensus 112 ~~fD~V~~~~~l~~~---~~---------~~~l~~~~~~LkpgG~l~i~ 148 (299)
T 3g5t_A 112 QKIDMITAVECAHWF---DF---------EKFQRSAYANLRKDGTIAIW 148 (299)
T ss_dssp SCEEEEEEESCGGGS---CH---------HHHHHHHHHHEEEEEEEEEE
T ss_pred CCeeEEeHhhHHHHh---CH---------HHHHHHHHHhcCCCcEEEEE
Confidence 579999998776543 11 12344566799999999983
No 77
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=95.31 E-value=0.63 Score=41.71 Aligned_cols=86 Identities=14% Similarity=0.096 Sum_probs=51.6
Q ss_pred CcccEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHhccCCCCEEEEeEccCCC--------CCHHHHHHHHHhc-CCe
Q psy15838 269 SHCFLVTADGSFDCQGNPGEQEILVGKLHYREVQIALSLLHNGGNLVIKIFTIFE--------SDTICLMYLLACL-FTS 339 (399)
Q Consensus 269 ~~vDLV~ADGs~d~sg~~~~qe~~s~~L~~~el~~Al~~Lr~GG~fVlK~F~~~e--------~~t~~Ll~lL~~~-F~~ 339 (399)
..+|+|++-+....-...+. ...+.-+..+|+|||.+|+=.|.... .....+..+|... |+.
T Consensus 131 ~~fD~v~~~~~l~~~~~~~~---------~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~ 201 (235)
T 3lcc_A 131 ELFDLIFDYVFFCAIEPEMR---------PAWAKSMYELLKPDGELITLMYPITDHVGGPPYKVDVSTFEEVLVPIGFKA 201 (235)
T ss_dssp SCEEEEEEESSTTTSCGGGH---------HHHHHHHHHHEEEEEEEEEEECCCSCCCSCSSCCCCHHHHHHHHGGGTEEE
T ss_pred CCeeEEEEChhhhcCCHHHH---------HHHHHHHHHHCCCCcEEEEEEecccccCCCCCccCCHHHHHHHHHHcCCeE
Confidence 47999998776654321111 12344556799999999997765421 1245677777765 877
Q ss_pred eeeecCCC--CCCCCceEEEEEeecc
Q psy15838 340 VDLFKPAT--SKEGNSEIYVICRDFH 363 (399)
Q Consensus 340 V~v~KP~a--SR~~sSE~YlVc~gf~ 363 (399)
+.+..-.. ......|.+.+.+..+
T Consensus 202 ~~~~~~~~~~~~~~g~e~~~~~~~~~ 227 (235)
T 3lcc_A 202 VSVEENPHAIPTRKGKEKLGRWKKIN 227 (235)
T ss_dssp EEEEECTTCCTTTTTSCEEEEEEESC
T ss_pred EEEEecCCccccccCHHHHhhhhhcc
Confidence 66543222 2223467777776654
No 78
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=95.28 E-value=0.11 Score=45.91 Aligned_cols=62 Identities=16% Similarity=0.040 Sum_probs=41.0
Q ss_pred CcccEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHhccCCCCEEEEeEccCCCCCHHHHHHHHHhc-CCeeee
Q psy15838 269 SHCFLVTADGSFDCQGNPGEQEILVGKLHYREVQIALSLLHNGGNLVIKIFTIFESDTICLMYLLACL-FTSVDL 342 (399)
Q Consensus 269 ~~vDLV~ADGs~d~sg~~~~qe~~s~~L~~~el~~Al~~Lr~GG~fVlK~F~~~e~~t~~Ll~lL~~~-F~~V~v 342 (399)
+.+|+|++...... ++.. ..+.-+..+|++||.+|+-.+.........+..+|... |+-+.+
T Consensus 114 ~~fD~v~~~~~l~~---~~~~---------~~l~~~~~~L~~gG~l~i~~~~~~~~~~~~~~~~l~~~Gf~~~~~ 176 (215)
T 2zfu_A 114 ESVDVAVFCLSLMG---TNIR---------DFLEEANRVLKPGGLLKVAEVSSRFEDVRTFLRAVTKLGFKIVSK 176 (215)
T ss_dssp TCEEEEEEESCCCS---SCHH---------HHHHHHHHHEEEEEEEEEEECGGGCSCHHHHHHHHHHTTEEEEEE
T ss_pred CCEeEEEEehhccc---cCHH---------HHHHHHHHhCCCCeEEEEEEcCCCCCCHHHHHHHHHHCCCEEEEE
Confidence 46999999777641 2221 22334567899999999977665333456777777765 766653
No 79
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=95.27 E-value=0.0082 Score=55.67 Aligned_cols=35 Identities=14% Similarity=0.086 Sum_probs=24.2
Q ss_pred CcccEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHhccCCCCEEEEe
Q psy15838 269 SHCFLVTADGSFDCQGNPGEQEILVGKLHYREVQIALSLLHNGGNLVIK 317 (399)
Q Consensus 269 ~~vDLV~ADGs~d~sg~~~~qe~~s~~L~~~el~~Al~~Lr~GG~fVlK 317 (399)
+++|+|++|+... ... ..+..+..+|+|||.+|+=
T Consensus 135 ~~fD~V~~d~~~~-----~~~---------~~l~~~~~~LkpGG~lv~~ 169 (248)
T 3tfw_A 135 PAFDLIFIDADKP-----NNP---------HYLRWALRYSRPGTLIIGD 169 (248)
T ss_dssp CCCSEEEECSCGG-----GHH---------HHHHHHHHTCCTTCEEEEE
T ss_pred CCeEEEEECCchH-----HHH---------HHHHHHHHhcCCCeEEEEe
Confidence 4799999998421 111 1344567899999999873
No 80
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=95.19 E-value=0.019 Score=51.72 Aligned_cols=45 Identities=13% Similarity=0.043 Sum_probs=29.8
Q ss_pred CcccEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHhccCCCCEEEEeEccCC
Q psy15838 269 SHCFLVTADGSFDCQGNPGEQEILVGKLHYREVQIALSLLHNGGNLVIKIFTIF 322 (399)
Q Consensus 269 ~~vDLV~ADGs~d~sg~~~~qe~~s~~L~~~el~~Al~~Lr~GG~fVlK~F~~~ 322 (399)
+.+|+|++......-. +.+ ....+.-+..+|+|||.+|+-.+...
T Consensus 108 ~~fD~v~~~~~l~~~~--~~~-------~~~~l~~~~~~LkpgG~l~~~~~~~~ 152 (234)
T 3dtn_A 108 EKYDMVVSALSIHHLE--DED-------KKELYKRSYSILKESGIFINADLVHG 152 (234)
T ss_dssp SCEEEEEEESCGGGSC--HHH-------HHHHHHHHHHHEEEEEEEEEEEECBC
T ss_pred CCceEEEEeCccccCC--HHH-------HHHHHHHHHHhcCCCcEEEEEEecCC
Confidence 5799999987655432 111 11234445689999999999876653
No 81
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=95.18 E-value=0.37 Score=47.33 Aligned_cols=147 Identities=16% Similarity=0.109 Sum_probs=78.1
Q ss_pred eEEEeccCCChhHHHHHHhhhccCCCCccceeccccCCCcCCCCCCcEEeccccccccCccccCCCccccCCCChHHHHH
Q psy15838 167 TSIHLCEAPGAFITSLNHYLKLHHPRMQWDWIANTLNPHYEGNSFDEMISDDRLILGTHRKWYFGPDNTGNILVQNFVSH 246 (399)
Q Consensus 167 ~vlDLceaPGgFsqaln~yl~~~~~~~~w~~~a~sLnP~~e~n~~~~vI~dD~~~~~~~~~w~~G~d~tGDI~~~~~i~~ 246 (399)
+++|+|||+|+|+.++.++... ..+.+|++++|..-.. + .+.. -..||+.+..
T Consensus 42 ~vLD~gcGtG~~~~~~~~~~~~-----~~~i~gvDi~~~~~~~------a---------~~~~---~~~~D~~~~~---- 94 (421)
T 2ih2_A 42 RVLEPACAHGPFLRAFREAHGT-----AYRFVGVEIDPKALDL------P---------PWAE---GILADFLLWE---- 94 (421)
T ss_dssp EEEEETCTTCHHHHHHHHHHCS-----CSEEEEEESCTTTCCC------C---------TTEE---EEESCGGGCC----
T ss_pred EEEECCCCChHHHHHHHHHhCC-----CCeEEEEECCHHHHHh------C---------CCCc---EEeCChhhcC----
Confidence 9999999999999987765421 1346777776642110 0 0000 1456654310
Q ss_pred HHHhhhhhhccCCCCCCCCCCCCcccEEEecCCCCCCCCC------chhHHHH-H-----------HHHHHHHHHHHhcc
Q psy15838 247 FKQHIGFLLIHDTSLAPHCTHASHCFLVTADGSFDCQGNP------GEQEILV-G-----------KLHYREVQIALSLL 308 (399)
Q Consensus 247 i~~~v~~~~~~~~~~~~~~~~~~~vDLV~ADGs~d~sg~~------~~qe~~s-~-----------~L~~~el~~Al~~L 308 (399)
...++|+|+++--.-..+.. ..++... . .+...-+..|..+|
T Consensus 95 --------------------~~~~fD~Ii~NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~L 154 (421)
T 2ih2_A 95 --------------------PGEAFDLILGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLL 154 (421)
T ss_dssp --------------------CSSCEEEEEECCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHE
T ss_pred --------------------ccCCCCEEEECcCccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHh
Confidence 12469999997322221110 0011110 0 13445577788999
Q ss_pred CCCCEEEEeEccCC--CCCHHHHHHHHHh-cCCeeeeecCCCCCCCCceEEEEEee
Q psy15838 309 HNGGNLVIKIFTIF--ESDTICLMYLLAC-LFTSVDLFKPATSKEGNSEIYVICRD 361 (399)
Q Consensus 309 r~GG~fVlK~F~~~--e~~t~~Ll~lL~~-~F~~V~v~KP~aSR~~sSE~YlVc~g 361 (399)
++||.+++=+-..+ ......+...|.. .+..+..+. ..-.....++.++...
T Consensus 155 k~~G~~~~i~p~~~l~~~~~~~lr~~l~~~~~~~i~~l~-~~F~~~~~~~~il~~~ 209 (421)
T 2ih2_A 155 KPGGVLVFVVPATWLVLEDFALLREFLAREGKTSVYYLG-EVFPQKKVSAVVIRFQ 209 (421)
T ss_dssp EEEEEEEEEEEGGGGTCGGGHHHHHHHHHHSEEEEEEEE-SCSTTCCCCEEEEEEE
T ss_pred CCCCEEEEEEChHHhcCccHHHHHHHHHhcCCeEEEECC-CCCCCCCccEEEEEEE
Confidence 99999998876542 1234566665444 343444333 3333344455555543
No 82
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=95.16 E-value=0.018 Score=57.14 Aligned_cols=52 Identities=19% Similarity=0.073 Sum_probs=34.0
Q ss_pred CcccEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHhccCCCCEEEEeEccCC
Q psy15838 269 SHCFLVTADGSFDCQGNPGEQEILVGKLHYREVQIALSLLHNGGNLVIKIFTIF 322 (399)
Q Consensus 269 ~~vDLV~ADGs~d~sg~~~~qe~~s~~L~~~el~~Al~~Lr~GG~fVlK~F~~~ 322 (399)
..+|+|++|--.-....... ..........+..+..+|+|||.+++-.....
T Consensus 278 ~~fD~Ii~dpP~~~~~~~~~--~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 329 (382)
T 1wxx_A 278 ERFDLVVLDPPAFAKGKKDV--ERAYRAYKEVNLRAIKLLKEGGILATASCSHH 329 (382)
T ss_dssp CCEEEEEECCCCSCCSTTSH--HHHHHHHHHHHHHHHHTEEEEEEEEEEECCTT
T ss_pred CCeeEEEECCCCCCCChhHH--HHHHHHHHHHHHHHHHhcCCCCEEEEEECCCC
Confidence 57999999853222111111 12234555667778999999999999877653
No 83
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=95.09 E-value=0.17 Score=45.33 Aligned_cols=50 Identities=20% Similarity=0.038 Sum_probs=34.7
Q ss_pred CcccEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHhccCCCCEEEEeEccCCCCCHHHHHHHHHhc
Q psy15838 269 SHCFLVTADGSFDCQGNPGEQEILVGKLHYREVQIALSLLHNGGNLVIKIFTIFESDTICLMYLLACL 336 (399)
Q Consensus 269 ~~vDLV~ADGs~d~sg~~~~qe~~s~~L~~~el~~Al~~Lr~GG~fVlK~F~~~e~~t~~Ll~lL~~~ 336 (399)
..+|+|+++++.+ . . .+..+..+|+|||.+|+-.... .....++..+...
T Consensus 121 ~~~D~v~~~~~~~-------~--------~-~l~~~~~~LkpgG~lv~~~~~~--~~~~~~~~~l~~~ 170 (204)
T 3njr_A 121 PLPEAVFIGGGGS-------Q--------A-LYDRLWEWLAPGTRIVANAVTL--ESETLLTQLHARH 170 (204)
T ss_dssp CCCSEEEECSCCC-------H--------H-HHHHHHHHSCTTCEEEEEECSH--HHHHHHHHHHHHH
T ss_pred CCCCEEEECCccc-------H--------H-HHHHHHHhcCCCcEEEEEecCc--ccHHHHHHHHHhC
Confidence 3699999988441 1 1 3445667899999999988776 3356666666654
No 84
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=95.07 E-value=0.059 Score=49.75 Aligned_cols=34 Identities=15% Similarity=0.200 Sum_probs=23.7
Q ss_pred HHHHHHHhCCCCCCCCCCceEEEeccCCChhHHHHHH
Q psy15838 148 KFHEIVHSYNIVPQQENSFTSIHLCEAPGAFITSLNH 184 (399)
Q Consensus 148 KL~EId~~f~l~~~~~~~~~vlDLceaPGgFsqaln~ 184 (399)
.+.+++.....++++ .++||||||+|.++..+..
T Consensus 24 ~l~~~l~~~~~~~~~---~~vLDiG~G~G~~~~~l~~ 57 (276)
T 3mgg_A 24 TLEKLLHHDTVYPPG---AKVLEAGCGIGAQTVILAK 57 (276)
T ss_dssp HHHHHHHTTCCCCTT---CEEEETTCTTSHHHHHHHH
T ss_pred HHHHHHhhcccCCCC---CeEEEecCCCCHHHHHHHH
Confidence 344555554444544 4999999999999986655
No 85
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=95.07 E-value=0.014 Score=55.03 Aligned_cols=43 Identities=5% Similarity=-0.052 Sum_probs=29.5
Q ss_pred CCcccEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHhccCCCCEEEEeEccCC
Q psy15838 268 ASHCFLVTADGSFDCQGNPGEQEILVGKLHYREVQIALSLLHNGGNLVIKIFTIF 322 (399)
Q Consensus 268 ~~~vDLV~ADGs~d~sg~~~~qe~~s~~L~~~el~~Al~~Lr~GG~fVlK~F~~~ 322 (399)
.+.+|+|++-.+.... +.+. .+.-+.++|||||.|++=.|...
T Consensus 97 ~~sfD~v~~~~~~h~~---~~~~---------~~~e~~rvLkpgG~l~~~~~~~~ 139 (257)
T 4hg2_A 97 PASVDVAIAAQAMHWF---DLDR---------FWAELRRVARPGAVFAAVTYGLT 139 (257)
T ss_dssp SSCEEEEEECSCCTTC---CHHH---------HHHHHHHHEEEEEEEEEEEECCC
T ss_pred CCcccEEEEeeehhHh---hHHH---------HHHHHHHHcCCCCEEEEEECCCC
Confidence 4579999997776543 2221 23345678999999998777654
No 86
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=95.07 E-value=0.16 Score=47.22 Aligned_cols=45 Identities=18% Similarity=0.218 Sum_probs=31.0
Q ss_pred CcccEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHhccCCCCEEEEeEccCC
Q psy15838 269 SHCFLVTADGSFDCQGNPGEQEILVGKLHYREVQIALSLLHNGGNLVIKIFTIF 322 (399)
Q Consensus 269 ~~vDLV~ADGs~d~sg~~~~qe~~s~~L~~~el~~Al~~Lr~GG~fVlK~F~~~ 322 (399)
+.+|+|++-+....-+.++.. ..+.-+..+|+|||.+|+-.+...
T Consensus 128 ~~fD~v~~~~~l~~~~~~~~~---------~~l~~~~~~LkpgG~l~~~~~~~~ 172 (287)
T 1kpg_A 128 EPVDRIVSIGAFEHFGHERYD---------AFFSLAHRLLPADGVMLLHTITGL 172 (287)
T ss_dssp CCCSEEEEESCGGGTCTTTHH---------HHHHHHHHHSCTTCEEEEEEEEEC
T ss_pred CCeeEEEEeCchhhcChHHHH---------HHHHHHHHhcCCCCEEEEEEecCC
Confidence 469999998876554432322 223445678999999999887753
No 87
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=95.06 E-value=0.13 Score=46.65 Aligned_cols=40 Identities=18% Similarity=0.207 Sum_probs=29.3
Q ss_pred CcccEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHhccCCCCEEEEeEcc
Q psy15838 269 SHCFLVTADGSFDCQGNPGEQEILVGKLHYREVQIALSLLHNGGNLVIKIFT 320 (399)
Q Consensus 269 ~~vDLV~ADGs~d~sg~~~~qe~~s~~L~~~el~~Al~~Lr~GG~fVlK~F~ 320 (399)
+.+|+|++.+..... +.. ..+.-+..+|+|||.+++=...
T Consensus 113 ~~fD~v~~~~~l~~~---~~~---------~~l~~~~~~L~pgG~l~~~~~~ 152 (257)
T 3f4k_A 113 EELDLIWSEGAIYNI---GFE---------RGMNEWSKYLKKGGFIAVSEAS 152 (257)
T ss_dssp TCEEEEEEESCSCCC---CHH---------HHHHHHHTTEEEEEEEEEEEEE
T ss_pred CCEEEEEecChHhhc---CHH---------HHHHHHHHHcCCCcEEEEEEee
Confidence 579999999887654 221 2345567899999999998643
No 88
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=95.06 E-value=0.054 Score=46.13 Aligned_cols=66 Identities=17% Similarity=0.205 Sum_probs=42.7
Q ss_pred CCcccEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHhccCCCCEEEEeEccCCCC----------CHHHHHHHHHhcC
Q psy15838 268 ASHCFLVTADGSFDCQGNPGEQEILVGKLHYREVQIALSLLHNGGNLVIKIFTIFES----------DTICLMYLLACLF 337 (399)
Q Consensus 268 ~~~vDLV~ADGs~d~sg~~~~qe~~s~~L~~~el~~Al~~Lr~GG~fVlK~F~~~e~----------~t~~Ll~lL~~~F 337 (399)
.+.+|+|++........ +.+ ..+.-+.++|++||.+++-.+..... ....+..+|. -|
T Consensus 73 ~~~~D~v~~~~~l~~~~--~~~---------~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-Gf 140 (170)
T 3i9f_A 73 DNSVDFILFANSFHDMD--DKQ---------HVISEVKRILKDDGRVIIIDWRKENTGIGPPLSIRMDEKDYMGWFS-NF 140 (170)
T ss_dssp TTCEEEEEEESCSTTCS--CHH---------HHHHHHHHHEEEEEEEEEEEECSSCCSSSSCGGGCCCHHHHHHHTT-TE
T ss_pred CCceEEEEEccchhccc--CHH---------HHHHHHHHhcCCCCEEEEEEcCccccccCchHhhhcCHHHHHHHHh-Cc
Confidence 35799999987765432 221 23344567899999999987654311 1345666777 77
Q ss_pred CeeeeecC
Q psy15838 338 TSVDLFKP 345 (399)
Q Consensus 338 ~~V~v~KP 345 (399)
+.+.+...
T Consensus 141 ~~~~~~~~ 148 (170)
T 3i9f_A 141 VVEKRFNP 148 (170)
T ss_dssp EEEEEECS
T ss_pred EEEEccCC
Confidence 77776554
No 89
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=95.06 E-value=0.094 Score=49.33 Aligned_cols=19 Identities=21% Similarity=0.086 Sum_probs=16.4
Q ss_pred eEEEeccCCChhHHHHHHh
Q psy15838 167 TSIHLCEAPGAFITSLNHY 185 (399)
Q Consensus 167 ~vlDLceaPGgFsqaln~y 185 (399)
++||||||+|.++.++.+.
T Consensus 73 ~vLDlGcGtG~~~~~la~~ 91 (261)
T 4gek_A 73 QVYDLGCSLGAATLSVRRN 91 (261)
T ss_dssp EEEEETCTTTHHHHHHHHT
T ss_pred EEEEEeCCCCHHHHHHHHh
Confidence 9999999999999876553
No 90
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=95.01 E-value=0.12 Score=47.50 Aligned_cols=43 Identities=21% Similarity=0.212 Sum_probs=30.5
Q ss_pred CcccEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHhccCCCCEEEEeEccCC
Q psy15838 269 SHCFLVTADGSFDCQGNPGEQEILVGKLHYREVQIALSLLHNGGNLVIKIFTIF 322 (399)
Q Consensus 269 ~~vDLV~ADGs~d~sg~~~~qe~~s~~L~~~el~~Al~~Lr~GG~fVlK~F~~~ 322 (399)
+.+|+|++-+......+ . ...+.-+..+|+|||.+++-.+...
T Consensus 128 ~~fD~v~~~~~l~~~~~--~---------~~~l~~~~~~L~pgG~l~i~~~~~~ 170 (273)
T 3bus_A 128 ASFDAVWALESLHHMPD--R---------GRALREMARVLRPGGTVAIADFVLL 170 (273)
T ss_dssp TCEEEEEEESCTTTSSC--H---------HHHHHHHHTTEEEEEEEEEEEEEES
T ss_pred CCccEEEEechhhhCCC--H---------HHHHHHHHHHcCCCeEEEEEEeecc
Confidence 57999999877664432 2 1234456789999999999887643
No 91
>1ej6_A Lambda2; icosahedral, non-equivalence, dsRNA virus, methylase, methyltransferase, guanylyltransferase, zinc finger, icosahedral virus; 3.60A {Reovirus SP} SCOP: i.7.1.1 PDB: 2cse_U
Probab=94.95 E-value=0.041 Score=61.43 Aligned_cols=95 Identities=18% Similarity=0.144 Sum_probs=78.5
Q ss_pred CCcccEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHhccCCCCEEEEeEccCCCCCHHHHHHHHHhcCCeeeeecCCC
Q psy15838 268 ASHCFLVTADGSFDCQGNPGEQEILVGKLHYREVQIALSLLHNGGNLVIKIFTIFESDTICLMYLLACLFTSVDLFKPAT 347 (399)
Q Consensus 268 ~~~vDLV~ADGs~d~sg~~~~qe~~s~~L~~~el~~Al~~Lr~GG~fVlK~F~~~e~~t~~Ll~lL~~~F~~V~v~KP~a 347 (399)
-+.+-+|=||----..|..+.+ .+.+...+.+..|+++.-.||.+|+|+----...-..|+......|...+++||--
T Consensus 568 TGtf~fVYSDvDQV~dgg~Dl~--Aasr~~~~~l~~~l~~tt~GG~~VvKiNFPT~~~W~~lf~~~~~~~~s~~lvKP~I 645 (1289)
T 1ej6_A 568 SGDYQFVYSDVDQVVDGHDDLS--ISSGLVESLLSSCMHATAPGGSFVVKINFPTRPVWHYIEQKILPNITSYMLIKPFV 645 (1289)
T ss_dssp CCCEEEEEECCCCCCSSSTTHH--HHHHHHHHHHHHHHHHEEEEEEEEEEESSCCHHHHHHHHHHTGGGEEEEEEEEEES
T ss_pred CcceEEEEechhhhhcCCCcch--hhHHHHHHHHHHHHHhhccCceEEEEEcCCChHHHHHHHHhhccccceeeeeccee
Confidence 3679999999887777765555 67899999999999999999999999965543445567777888899999999975
Q ss_pred CCCCCceEEEEEeeccCCc
Q psy15838 348 SKEGNSEIYVICRDFHSVC 366 (399)
Q Consensus 348 SR~~sSE~YlVc~gf~g~~ 366 (399)
..|.|+|+||-|+....
T Consensus 646 --vNnvEvflv~~~r~~~g 662 (1289)
T 1ej6_A 646 --TNNVELFFVAFGVHQHS 662 (1289)
T ss_dssp --SSSCCEEEEEEEESCCC
T ss_pred --ecceEEEEEEEeeecCC
Confidence 47899999999998544
No 92
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=94.94 E-value=0.02 Score=54.45 Aligned_cols=85 Identities=14% Similarity=0.105 Sum_probs=50.8
Q ss_pred CcccEEEecCCCCCCCCCchhHHHHHHHH-HHHHHHHHhccCCCCEEEEeEccCCC--CCHHHHHHHHHhcCCeeeeecC
Q psy15838 269 SHCFLVTADGSFDCQGNPGEQEILVGKLH-YREVQIALSLLHNGGNLVIKIFTIFE--SDTICLMYLLACLFTSVDLFKP 345 (399)
Q Consensus 269 ~~vDLV~ADGs~d~sg~~~~qe~~s~~L~-~~el~~Al~~Lr~GG~fVlK~F~~~e--~~t~~Ll~lL~~~F~~V~v~KP 345 (399)
+.+|+|++|..... +. .. .|. ...+..+.+.|++||.+|+-.-.... .....++..|+..|..|.++.-
T Consensus 150 ~~fD~Ii~d~~~~~-~~-~~------~l~~~~~l~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~v~~~~~ 221 (283)
T 2i7c_A 150 NTYDVIIVDSSDPI-GP-AE------TLFNQNFYEKIYNALKPNGYCVAQCESLWIHVGTIKNMIGYAKKLFKKVEYANI 221 (283)
T ss_dssp SCEEEEEEECCCTT-TG-GG------GGSSHHHHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred CCceEEEEcCCCCC-Cc-ch------hhhHHHHHHHHHHhcCCCcEEEEECCCcccCHHHHHHHHHHHHHHCCceEEEEE
Confidence 57999999975322 21 11 111 23344567899999999998543211 2245677789999998876532
Q ss_pred -CCCCCCCceEEEEEee
Q psy15838 346 -ATSKEGNSEIYVICRD 361 (399)
Q Consensus 346 -~aSR~~sSE~YlVc~g 361 (399)
..+-++.-=.|++|..
T Consensus 222 ~vP~y~~g~~g~~~~s~ 238 (283)
T 2i7c_A 222 SIPTYPCGCIGILCCSK 238 (283)
T ss_dssp ECTTSGGGEEEEEEEES
T ss_pred EcCCcCCCcEEEEEEeC
Confidence 2232222235777753
No 93
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=94.91 E-value=0.087 Score=48.53 Aligned_cols=41 Identities=20% Similarity=0.200 Sum_probs=29.9
Q ss_pred CCcccEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHhccCCCCEEEEeEcc
Q psy15838 268 ASHCFLVTADGSFDCQGNPGEQEILVGKLHYREVQIALSLLHNGGNLVIKIFT 320 (399)
Q Consensus 268 ~~~vDLV~ADGs~d~sg~~~~qe~~s~~L~~~el~~Al~~Lr~GG~fVlK~F~ 320 (399)
.+.+|+|++.+..... +. ...+..+..+|+|||.+|+=...
T Consensus 112 ~~~fD~i~~~~~~~~~---~~---------~~~l~~~~~~LkpgG~l~~~~~~ 152 (267)
T 3kkz_A 112 NEELDLIWSEGAIYNI---GF---------ERGLNEWRKYLKKGGYLAVSECS 152 (267)
T ss_dssp TTCEEEEEESSCGGGT---CH---------HHHHHHHGGGEEEEEEEEEEEEE
T ss_pred CCCEEEEEEcCCceec---CH---------HHHHHHHHHHcCCCCEEEEEEee
Confidence 3579999999887544 11 22456677899999999987654
No 94
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=94.89 E-value=0.2 Score=45.29 Aligned_cols=69 Identities=10% Similarity=-0.025 Sum_probs=43.3
Q ss_pred CcccEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHhccCCCCEEEEeEccCCC------------CCHHHHHHHHHhc
Q psy15838 269 SHCFLVTADGSFDCQGNPGEQEILVGKLHYREVQIALSLLHNGGNLVIKIFTIFE------------SDTICLMYLLACL 336 (399)
Q Consensus 269 ~~vDLV~ADGs~d~sg~~~~qe~~s~~L~~~el~~Al~~Lr~GG~fVlK~F~~~e------------~~t~~Ll~lL~~~ 336 (399)
+.+|+|++++....-. +. -....+.-+..+|+|||.+|+..+.... .....+..+|...
T Consensus 145 ~~fD~v~~~~~l~~~~--~~-------~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a 215 (241)
T 2ex4_A 145 DSYDVIWIQWVIGHLT--DQ-------HLAEFLRRCKGSLRPNGIIVIKDNMAQEGVILDDVDSSVCRDLDVVRRIICSA 215 (241)
T ss_dssp SCEEEEEEESCGGGSC--HH-------HHHHHHHHHHHHEEEEEEEEEEEEEBSSSEEEETTTTEEEEBHHHHHHHHHHT
T ss_pred CCEEEEEEcchhhhCC--HH-------HHHHHHHHHHHhcCCCeEEEEEEccCCCcceecccCCcccCCHHHHHHHHHHc
Confidence 4799999997654321 11 1233445567899999999996643210 1245677777655
Q ss_pred -CCeeeeecCC
Q psy15838 337 -FTSVDLFKPA 346 (399)
Q Consensus 337 -F~~V~v~KP~ 346 (399)
|+.+.+....
T Consensus 216 Gf~~~~~~~~~ 226 (241)
T 2ex4_A 216 GLSLLAEERQE 226 (241)
T ss_dssp TCCEEEEEECC
T ss_pred CCeEEEeeecC
Confidence 8877776543
No 95
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=94.89 E-value=0.088 Score=51.16 Aligned_cols=85 Identities=14% Similarity=0.117 Sum_probs=51.5
Q ss_pred CcccEEEecCCCCCCCCCchhHHHHHHHH-HHHHHHHHhccCCCCEEEEeEccCCC--CCHHHHHHHHHhcCCeeeeec-
Q psy15838 269 SHCFLVTADGSFDCQGNPGEQEILVGKLH-YREVQIALSLLHNGGNLVIKIFTIFE--SDTICLMYLLACLFTSVDLFK- 344 (399)
Q Consensus 269 ~~vDLV~ADGs~d~sg~~~~qe~~s~~L~-~~el~~Al~~Lr~GG~fVlK~F~~~e--~~t~~Ll~lL~~~F~~V~v~K- 344 (399)
+.+|+|++|..... +. .. .+. ...+..+.+.|++||.+|+-.-.... .....++..+...|..|.++.
T Consensus 188 ~~fDvIi~d~~~p~-~~-~~------~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~v~~~~~ 259 (321)
T 2pt6_A 188 NTYDVIIVDSSDPI-GP-AE------TLFNQNFYEKIYNALKPNGYCVAQCESLWIHVGTIKNMIGYAKKLFKKVEYANI 259 (321)
T ss_dssp SCEEEEEEECCCSS-SG-GG------GGSSHHHHHHHHHHEEEEEEEEEEECCTTTCHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred CCceEEEECCcCCC-Cc-ch------hhhHHHHHHHHHHhcCCCcEEEEEcCCcccCHHHHHHHHHHHHHHCCCeEEEEE
Confidence 46999999974221 21 11 111 22334566899999999997644321 234567778999999997765
Q ss_pred CCCCCCCCceEEEEEee
Q psy15838 345 PATSKEGNSEIYVICRD 361 (399)
Q Consensus 345 P~aSR~~sSE~YlVc~g 361 (399)
+..+.+...=.+++|..
T Consensus 260 ~vp~~~~g~w~f~~as~ 276 (321)
T 2pt6_A 260 SIPTYPCGCIGILCCSK 276 (321)
T ss_dssp ECTTSGGGEEEEEEEES
T ss_pred EeccccCceEEEEEeeC
Confidence 22233333345778864
No 96
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=94.89 E-value=0.17 Score=45.94 Aligned_cols=39 Identities=18% Similarity=0.207 Sum_probs=26.5
Q ss_pred CcccEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHhccCCCCEEEEeE
Q psy15838 269 SHCFLVTADGSFDCQGNPGEQEILVGKLHYREVQIALSLLHNGGNLVIKI 318 (399)
Q Consensus 269 ~~vDLV~ADGs~d~sg~~~~qe~~s~~L~~~el~~Al~~Lr~GG~fVlK~ 318 (399)
+.+|+|++-++.....+ . ...+.-+..+|+|||.+++-.
T Consensus 102 ~~fD~V~~~~~~~~~~~--~---------~~~l~~~~r~LkpgG~l~~~~ 140 (256)
T 1nkv_A 102 EKCDVAACVGATWIAGG--F---------AGAEELLAQSLKPGGIMLIGE 140 (256)
T ss_dssp SCEEEEEEESCGGGTSS--S---------HHHHHHHTTSEEEEEEEEEEE
T ss_pred CCCCEEEECCChHhcCC--H---------HHHHHHHHHHcCCCeEEEEec
Confidence 46999999666543321 1 223445678999999999864
No 97
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=94.89 E-value=0.027 Score=49.37 Aligned_cols=43 Identities=19% Similarity=0.062 Sum_probs=26.8
Q ss_pred CcccEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHh--ccCCCCEEEEeEccC
Q psy15838 269 SHCFLVTADGSFDCQGNPGEQEILVGKLHYREVQIALS--LLHNGGNLVIKIFTI 321 (399)
Q Consensus 269 ~~vDLV~ADGs~d~sg~~~~qe~~s~~L~~~el~~Al~--~Lr~GG~fVlK~F~~ 321 (399)
..+|+|++|...... . ......+..+.. +|+|||.+|+-....
T Consensus 112 ~~fD~i~~~~p~~~~-----~-----~~~~~~l~~~~~~~~L~pgG~l~~~~~~~ 156 (189)
T 3p9n_A 112 SPVDLVLADPPYNVD-----S-----ADVDAILAALGTNGWTREGTVAVVERATT 156 (189)
T ss_dssp SCCSEEEECCCTTSC-----H-----HHHHHHHHHHHHSSSCCTTCEEEEEEETT
T ss_pred CCccEEEECCCCCcc-----h-----hhHHHHHHHHHhcCccCCCeEEEEEecCC
Confidence 579999998664321 0 112222233344 999999999976554
No 98
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=94.86 E-value=0.016 Score=52.69 Aligned_cols=45 Identities=9% Similarity=-0.102 Sum_probs=30.8
Q ss_pred CCcccEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHhccCCCCEEEEeEccC
Q psy15838 268 ASHCFLVTADGSFDCQGNPGEQEILVGKLHYREVQIALSLLHNGGNLVIKIFTI 321 (399)
Q Consensus 268 ~~~vDLV~ADGs~d~sg~~~~qe~~s~~L~~~el~~Al~~Lr~GG~fVlK~F~~ 321 (399)
.+.+|+|++-+....-..++.. ..+.-+..+|+|||.+|+-+...
T Consensus 99 ~~~fD~i~~~~~l~~~~~~~~~---------~~l~~~~~~LkpgG~l~~~~~~~ 143 (240)
T 3dli_A 99 DKYLDGVMISHFVEHLDPERLF---------ELLSLCYSKMKYSSYIVIESPNP 143 (240)
T ss_dssp TTCBSEEEEESCGGGSCGGGHH---------HHHHHHHHHBCTTCCEEEEEECT
T ss_pred CCCeeEEEECCchhhCCcHHHH---------HHHHHHHHHcCCCcEEEEEeCCc
Confidence 3579999998776544332222 23344567999999999987654
No 99
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=94.86 E-value=0.005 Score=55.36 Aligned_cols=35 Identities=20% Similarity=0.240 Sum_probs=24.3
Q ss_pred CcccEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHhccCCCCEEEEe
Q psy15838 269 SHCFLVTADGSFDCQGNPGEQEILVGKLHYREVQIALSLLHNGGNLVIK 317 (399)
Q Consensus 269 ~~vDLV~ADGs~d~sg~~~~qe~~s~~L~~~el~~Al~~Lr~GG~fVlK 317 (399)
+.+|+|++|+... ... ..+..+..+|+|||.+|+-
T Consensus 139 ~~fD~v~~~~~~~-----~~~---------~~l~~~~~~L~pgG~lv~~ 173 (225)
T 3tr6_A 139 WQYDLIYIDADKA-----NTD---------LYYEESLKLLREGGLIAVD 173 (225)
T ss_dssp TCEEEEEECSCGG-----GHH---------HHHHHHHHHEEEEEEEEEE
T ss_pred CCccEEEECCCHH-----HHH---------HHHHHHHHhcCCCcEEEEe
Confidence 5799999988521 111 1344566899999999973
No 100
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=94.85 E-value=0.17 Score=49.88 Aligned_cols=66 Identities=18% Similarity=0.108 Sum_probs=43.0
Q ss_pred CCcccEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHhccCCCCEEEEeEccCCC--------------------CCHH
Q psy15838 268 ASHCFLVTADGSFDCQGNPGEQEILVGKLHYREVQIALSLLHNGGNLVIKIFTIFE--------------------SDTI 327 (399)
Q Consensus 268 ~~~vDLV~ADGs~d~sg~~~~qe~~s~~L~~~el~~Al~~Lr~GG~fVlK~F~~~e--------------------~~t~ 327 (399)
.+.+|+|++.+......+ . ...+.-+..+|+|||.|++=.+.... ....
T Consensus 164 ~~~fD~V~~~~~l~~~~d--~---------~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (383)
T 4fsd_A 164 DSSVDIVISNCVCNLSTN--K---------LALFKEIHRVLRDGGELYFSDVYADRRLSEAAQQDPILYGECLGGALYLE 232 (383)
T ss_dssp TTCEEEEEEESCGGGCSC--H---------HHHHHHHHHHEEEEEEEEEEEEEESSCCCHHHHHCHHHHHTTCTTCCBHH
T ss_pred CCCEEEEEEccchhcCCC--H---------HHHHHHHHHHcCCCCEEEEEEeccccccCHhHhhhHHHhhcccccCCCHH
Confidence 357999999988765432 2 13344566899999999986543321 1235
Q ss_pred HHHHHHHhc-CCeeeeec
Q psy15838 328 CLMYLLACL-FTSVDLFK 344 (399)
Q Consensus 328 ~Ll~lL~~~-F~~V~v~K 344 (399)
.+..+|... |+.|.+..
T Consensus 233 ~~~~ll~~aGF~~v~~~~ 250 (383)
T 4fsd_A 233 DFRRLVAEAGFRDVRLVS 250 (383)
T ss_dssp HHHHHHHHTTCCCEEEEE
T ss_pred HHHHHHHHCCCceEEEEe
Confidence 667777665 88776654
No 101
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=94.83 E-value=0.13 Score=48.75 Aligned_cols=42 Identities=12% Similarity=-0.135 Sum_probs=29.3
Q ss_pred CcccEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHhccCCCCEEEEeEccCC
Q psy15838 269 SHCFLVTADGSFDCQGNPGEQEILVGKLHYREVQIALSLLHNGGNLVIKIFTIF 322 (399)
Q Consensus 269 ~~vDLV~ADGs~d~sg~~~~qe~~s~~L~~~el~~Al~~Lr~GG~fVlK~F~~~ 322 (399)
+.+|+|++-+.....+ ....+..+..+|+|||.+|+-.+...
T Consensus 184 ~~fD~V~~~~~l~~~~------------~~~~l~~~~~~LkpgG~l~~~~~~~~ 225 (312)
T 3vc1_A 184 GAVTASWNNESTMYVD------------LHDLFSEHSRFLKVGGRYVTITGCWN 225 (312)
T ss_dssp TCEEEEEEESCGGGSC------------HHHHHHHHHHHEEEEEEEEEEEEEEC
T ss_pred CCEeEEEECCchhhCC------------HHHHHHHHHHHcCCCcEEEEEEcccc
Confidence 5799999976655431 23334456779999999998775543
No 102
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=94.76 E-value=0.1 Score=51.79 Aligned_cols=52 Identities=17% Similarity=0.057 Sum_probs=33.7
Q ss_pred CcccEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHhccCCCCEEEEeEccCC
Q psy15838 269 SHCFLVTADGSFDCQGNPGEQEILVGKLHYREVQIALSLLHNGGNLVIKIFTIF 322 (399)
Q Consensus 269 ~~vDLV~ADGs~d~sg~~~~qe~~s~~L~~~el~~Al~~Lr~GG~fVlK~F~~~ 322 (399)
..+|+|++|.-.-... ..+-..........+..++.+|+|||.+|+-.....
T Consensus 288 ~~fD~Vi~dpP~~~~~--~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~ 339 (396)
T 2as0_A 288 EKFDIVVLDPPAFVQH--EKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCSQH 339 (396)
T ss_dssp CCEEEEEECCCCSCSS--GGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECCTT
T ss_pred CCCCEEEECCCCCCCC--HHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCCC
Confidence 4799999995322111 111112234455667778999999999998887653
No 103
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=94.76 E-value=0.055 Score=52.63 Aligned_cols=84 Identities=15% Similarity=0.180 Sum_probs=47.5
Q ss_pred CcccEEEecCCCCCCCCCchhHHHHHHHH-HHHHHHHHhccCCCCEEEEeEccCC--CCCHHHHHHHHHhcCCeeeeecC
Q psy15838 269 SHCFLVTADGSFDCQGNPGEQEILVGKLH-YREVQIALSLLHNGGNLVIKIFTIF--ESDTICLMYLLACLFTSVDLFKP 345 (399)
Q Consensus 269 ~~vDLV~ADGs~d~sg~~~~qe~~s~~L~-~~el~~Al~~Lr~GG~fVlK~F~~~--e~~t~~Ll~lL~~~F~~V~v~KP 345 (399)
+.+|+|++|..... +. . ..|. ...+..+...|++||.+|+-.-... ......+...+...|..|.++.-
T Consensus 180 ~~fD~Ii~d~~~~~-~~-~------~~l~t~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~vF~~v~~~~~ 251 (314)
T 2b2c_A 180 NEFDVIITDSSDPV-GP-A------ESLFGQSYYELLRDALKEDGILSSQGESVWLHLPLIAHLVAFNRKIFPAVTYAQS 251 (314)
T ss_dssp TCEEEEEECCC---------------------HHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHHHHCSEEEEEEE
T ss_pred CCceEEEEcCCCCC-Cc-c------hhhhHHHHHHHHHhhcCCCeEEEEECCCcccCHHHHHHHHHHHHHHCCcceEEEE
Confidence 56999999984221 11 1 1122 3344556789999999999752211 12345677789999999876532
Q ss_pred -CCCCCCCce-EEEEEee
Q psy15838 346 -ATSKEGNSE-IYVICRD 361 (399)
Q Consensus 346 -~aSR~~sSE-~YlVc~g 361 (399)
..+.+. .. -+++|..
T Consensus 252 ~iP~~~~-g~~g~~~ask 268 (314)
T 2b2c_A 252 IVSTYPS-GSMGYLICAK 268 (314)
T ss_dssp ECTTSGG-GEEEEEEEES
T ss_pred EecCcCC-CceEEEEEeC
Confidence 112221 22 4788864
No 104
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=94.72 E-value=0.96 Score=40.64 Aligned_cols=68 Identities=10% Similarity=-0.072 Sum_probs=40.1
Q ss_pred CcccEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHhccCCCCEEEEeEccCCC-------------CCHHHHHHHHHh
Q psy15838 269 SHCFLVTADGSFDCQGNPGEQEILVGKLHYREVQIALSLLHNGGNLVIKIFTIFE-------------SDTICLMYLLAC 335 (399)
Q Consensus 269 ~~vDLV~ADGs~d~sg~~~~qe~~s~~L~~~el~~Al~~Lr~GG~fVlK~F~~~e-------------~~t~~Ll~lL~~ 335 (399)
+.+|+|++-.....- ++.+ ....+.-+..+|+|||.+|+-...... .....+..+|..
T Consensus 157 ~~fD~v~~~~~l~~~--~~~~-------~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 227 (254)
T 1xtp_A 157 NTYDLIVIQWTAIYL--TDAD-------FVKFFKHCQQALTPNGYIFFKENCSTGDRFLVDKEDSSLTRSDIHYKRLFNE 227 (254)
T ss_dssp SCEEEEEEESCGGGS--CHHH-------HHHHHHHHHHHEEEEEEEEEEEEBC--CCEEEETTTTEEEBCHHHHHHHHHH
T ss_pred CCeEEEEEcchhhhC--CHHH-------HHHHHHHHHHhcCCCeEEEEEecCCCcccceecccCCcccCCHHHHHHHHHH
Confidence 579999987754322 1111 223344556799999999998742110 123556666654
Q ss_pred -cCCeeeeecC
Q psy15838 336 -LFTSVDLFKP 345 (399)
Q Consensus 336 -~F~~V~v~KP 345 (399)
=|+.+.+...
T Consensus 228 aGf~~~~~~~~ 238 (254)
T 1xtp_A 228 SGVRVVKEAFQ 238 (254)
T ss_dssp HTCCEEEEEEC
T ss_pred CCCEEEEeeec
Confidence 4877776554
No 105
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=94.71 E-value=0.49 Score=42.85 Aligned_cols=41 Identities=7% Similarity=0.028 Sum_probs=27.9
Q ss_pred CCcccEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHhccCCCCEEEEeEc
Q psy15838 268 ASHCFLVTADGSFDCQGNPGEQEILVGKLHYREVQIALSLLHNGGNLVIKIF 319 (399)
Q Consensus 268 ~~~vDLV~ADGs~d~sg~~~~qe~~s~~L~~~el~~Al~~Lr~GG~fVlK~F 319 (399)
.+.+|+|++.+....- ++. ...+.-+.++|+|||.+|+-+.
T Consensus 106 ~~~fD~v~~~~~l~~~--~~~---------~~~l~~~~~~LkpgG~l~~~~~ 146 (253)
T 3g5l_A 106 PDAYNVVLSSLALHYI--ASF---------DDICKKVYINLKSSGSFIFSVE 146 (253)
T ss_dssp TTCEEEEEEESCGGGC--SCH---------HHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCCeEEEEEchhhhhh--hhH---------HHHHHHHHHHcCCCcEEEEEeC
Confidence 3579999998865433 222 2234456679999999999643
No 106
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=94.68 E-value=0.041 Score=53.22 Aligned_cols=85 Identities=16% Similarity=0.140 Sum_probs=51.5
Q ss_pred CcccEEEecCCCCCC-CCCchhHHHHHHHHHHHHHHHHhccCCCCEEEEeEccCC---CCCHHHHHHHHHhcCCeeeeec
Q psy15838 269 SHCFLVTADGSFDCQ-GNPGEQEILVGKLHYREVQIALSLLHNGGNLVIKIFTIF---ESDTICLMYLLACLFTSVDLFK 344 (399)
Q Consensus 269 ~~vDLV~ADGs~d~s-g~~~~qe~~s~~L~~~el~~Al~~Lr~GG~fVlK~F~~~---e~~t~~Ll~lL~~~F~~V~v~K 344 (399)
+.+|+|++|...... +.+. +.+. ....+..+.++|++||.+|+-..... ......+...|...|..|.++.
T Consensus 150 ~~fD~Ii~d~~~~~~~~~~~--~~l~---~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~~l~~~F~~v~~~~ 224 (314)
T 1uir_A 150 ERYDVVIIDLTDPVGEDNPA--RLLY---TVEFYRLVKAHLNPGGVMGMQTGMILLTHHRVHPVVHRTVREAFRYVRSYK 224 (314)
T ss_dssp CCEEEEEEECCCCBSTTCGG--GGGS---SHHHHHHHHHTEEEEEEEEEEEEEECC---CHHHHHHHHHHTTCSEEEEEE
T ss_pred CCccEEEECCCCcccccCcc--hhcc---HHHHHHHHHHhcCCCcEEEEEccCccccCHHHHHHHHHHHHHHCCceEEEE
Confidence 569999999764330 0111 1110 12234456789999999999764322 2345677888999999987664
Q ss_pred ---CCCCCCCCceEEEEEee
Q psy15838 345 ---PATSKEGNSEIYVICRD 361 (399)
Q Consensus 345 ---P~aSR~~sSE~YlVc~g 361 (399)
|.. +..-.+++|..
T Consensus 225 ~~vP~~---~g~~~~~~as~ 241 (314)
T 1uir_A 225 NHIPGF---FLNFGFLLASD 241 (314)
T ss_dssp EEEGGG---TEEEEEEEEES
T ss_pred EecCCC---CCeEEEEEEEC
Confidence 433 22335667753
No 107
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=94.66 E-value=0.042 Score=52.12 Aligned_cols=86 Identities=9% Similarity=0.042 Sum_probs=52.6
Q ss_pred CcccEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHhccCCCCEEEEeEccCC--CCCHHHHHHHHHhcCCeeeeec-C
Q psy15838 269 SHCFLVTADGSFDCQGNPGEQEILVGKLHYREVQIALSLLHNGGNLVIKIFTIF--ESDTICLMYLLACLFTSVDLFK-P 345 (399)
Q Consensus 269 ~~vDLV~ADGs~d~sg~~~~qe~~s~~L~~~el~~Al~~Lr~GG~fVlK~F~~~--e~~t~~Ll~lL~~~F~~V~v~K-P 345 (399)
..+|+|++|..... +.+.. ..+ ..-+..+...|++||.||+-.-... ......++..|+..|..|.++. +
T Consensus 147 ~~fD~Ii~d~~~~~-~~~~~--l~~----~~~~~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~v~~~~~~ 219 (275)
T 1iy9_A 147 NQYDVIMVDSTEPV-GPAVN--LFT----KGFYAGIAKALKEDGIFVAQTDNPWFTPELITNVQRDVKEIFPITKLYTAN 219 (275)
T ss_dssp SCEEEEEESCSSCC-SCCCC--CST----THHHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHHTTCSEEEEEEEC
T ss_pred CCeeEEEECCCCCC-Ccchh--hhH----HHHHHHHHHhcCCCcEEEEEcCCccccHHHHHHHHHHHHHhCCCeEEEEEe
Confidence 57999999976422 21110 000 1112345588999999999864432 1234567788999999998775 2
Q ss_pred CCCCCCCceEEEEEee
Q psy15838 346 ATSKEGNSEIYVICRD 361 (399)
Q Consensus 346 ~aSR~~sSE~YlVc~g 361 (399)
..+.++..-.+++|..
T Consensus 220 vp~~~~g~w~~~~ask 235 (275)
T 1iy9_A 220 IPTYPSGLWTFTIGSK 235 (275)
T ss_dssp CTTSGGGCEEEEEEES
T ss_pred cCcccCcceEEEEeeC
Confidence 2333344557888864
No 108
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=94.61 E-value=0.019 Score=52.83 Aligned_cols=35 Identities=23% Similarity=0.293 Sum_probs=23.8
Q ss_pred ceEEEeccCCChhHHHHHHhhhccCCCCccceeccccCC
Q psy15838 166 FTSIHLCEAPGAFITSLNHYLKLHHPRMQWDWIANTLNP 204 (399)
Q Consensus 166 ~~vlDLceaPGgFsqaln~yl~~~~~~~~w~~~a~sLnP 204 (399)
.+++|+|||+|.++..+...+.. ..++.+|++++|
T Consensus 53 ~~vLD~gcGsG~~~~~la~~~~~----~~~~v~gvDis~ 87 (250)
T 1o9g_A 53 VTLWDPCCGSGYLLTVLGLLHRR----SLRQVIASDVDP 87 (250)
T ss_dssp EEEEETTCTTSHHHHHHHHHTGG----GEEEEEEEESCH
T ss_pred CeEEECCCCCCHHHHHHHHHhcc----CCCeEEEEECCH
Confidence 69999999999998877654211 013456666654
No 109
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=94.60 E-value=0.15 Score=48.87 Aligned_cols=85 Identities=16% Similarity=0.068 Sum_probs=51.8
Q ss_pred CcccEEEecCCCCCCCCCchhHHHHHHHH-HHHHHHHHhccCCCCEEEEeEccCCC--CCHHHHHHHHHhc-CCeeeeec
Q psy15838 269 SHCFLVTADGSFDCQGNPGEQEILVGKLH-YREVQIALSLLHNGGNLVIKIFTIFE--SDTICLMYLLACL-FTSVDLFK 344 (399)
Q Consensus 269 ~~vDLV~ADGs~d~sg~~~~qe~~s~~L~-~~el~~Al~~Lr~GG~fVlK~F~~~e--~~t~~Ll~lL~~~-F~~V~v~K 344 (399)
+.+|+|++|...... + . ..|. ...+..+.++|++||.+|+-.-..+. .....+...|... |..|.++.
T Consensus 168 ~~fDvIi~d~~~~~~--~--~----~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~GF~~v~~~~ 239 (304)
T 3bwc_A 168 NTYDVVIIDTTDPAG--P--A----SKLFGEAFYKDVLRILKPDGICCNQGESIWLDLELIEKMSRFIRETGFASVQYAL 239 (304)
T ss_dssp TCEEEEEEECC-----------------CCHHHHHHHHHHEEEEEEEEEEECCTTTCHHHHHHHHHHHHHHTCSEEEEEE
T ss_pred CceeEEEECCCCccc--c--c----hhhhHHHHHHHHHHhcCCCcEEEEecCCcccchHHHHHHHHHHHhCCCCcEEEEE
Confidence 579999999754321 0 1 1111 23344567899999999997533211 1345677789998 99988775
Q ss_pred C-CCCCCCCceEEEEEee
Q psy15838 345 P-ATSKEGNSEIYVICRD 361 (399)
Q Consensus 345 P-~aSR~~sSE~YlVc~g 361 (399)
- ..+.++..=.|++|..
T Consensus 240 ~~vP~yp~g~w~f~~as~ 257 (304)
T 3bwc_A 240 MHVPTYPCGSIGTLVCSK 257 (304)
T ss_dssp CCCTTSTTSCCEEEEEES
T ss_pred eecccccCcceEEEEEeC
Confidence 3 3444445557888865
No 110
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=94.60 E-value=0.15 Score=47.67 Aligned_cols=42 Identities=12% Similarity=0.080 Sum_probs=29.2
Q ss_pred CcccEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHhccCCCCEEEEeEccC
Q psy15838 269 SHCFLVTADGSFDCQGNPGEQEILVGKLHYREVQIALSLLHNGGNLVIKIFTI 321 (399)
Q Consensus 269 ~~vDLV~ADGs~d~sg~~~~qe~~s~~L~~~el~~Al~~Lr~GG~fVlK~F~~ 321 (399)
+.+|+|++-+....-.+ . ...+.-+..+|+|||.+|+-....
T Consensus 149 ~~fD~v~~~~~l~~~~~--~---------~~~l~~~~~~LkpgG~l~~~~~~~ 190 (297)
T 2o57_A 149 NSYDFIWSQDAFLHSPD--K---------LKVFQECARVLKPRGVMAITDPMK 190 (297)
T ss_dssp TCEEEEEEESCGGGCSC--H---------HHHHHHHHHHEEEEEEEEEEEEEE
T ss_pred CCEeEEEecchhhhcCC--H---------HHHHHHHHHHcCCCeEEEEEEecc
Confidence 57999999877654322 1 233444567899999999987654
No 111
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=94.54 E-value=0.014 Score=52.73 Aligned_cols=54 Identities=15% Similarity=-0.023 Sum_probs=33.5
Q ss_pred CcccEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHhccCCCCEEEEeEccCCCCCHHHHHHHHHhc
Q psy15838 269 SHCFLVTADGSFDCQGNPGEQEILVGKLHYREVQIALSLLHNGGNLVIKIFTIFESDTICLMYLLACL 336 (399)
Q Consensus 269 ~~vDLV~ADGs~d~sg~~~~qe~~s~~L~~~el~~Al~~Lr~GG~fVlK~F~~~e~~t~~Ll~lL~~~ 336 (399)
..+|+|++|+.... .. ...++.-++.+|+|||.+|+--... +....++..+...
T Consensus 133 ~~fD~V~~d~~~~~-----~~-------~~~~~~~~~~~LkpgG~lv~~~~~~--~~~~~~~~~l~~~ 186 (221)
T 3u81_A 133 DTLDMVFLDHWKDR-----YL-------PDTLLLEKCGLLRKGTVLLADNVIV--PGTPDFLAYVRGS 186 (221)
T ss_dssp CCCSEEEECSCGGG-----HH-------HHHHHHHHTTCCCTTCEEEESCCCC--CCCHHHHHHHHHC
T ss_pred CceEEEEEcCCccc-----ch-------HHHHHHHhccccCCCeEEEEeCCCC--cchHHHHHHHhhC
Confidence 57999999975431 11 1112222338999999999876554 3356666666543
No 112
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=94.52 E-value=0.011 Score=52.92 Aligned_cols=71 Identities=6% Similarity=-0.173 Sum_probs=36.3
Q ss_pred CcccEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHhccCCCCEEEEeEccCCCCCHHHHHHHHHh-cCCeeeeec
Q psy15838 269 SHCFLVTADGSFDCQGNPGEQEILVGKLHYREVQIALSLLHNGGNLVIKIFTIFESDTICLMYLLAC-LFTSVDLFK 344 (399)
Q Consensus 269 ~~vDLV~ADGs~d~sg~~~~qe~~s~~L~~~el~~Al~~Lr~GG~fVlK~F~~~e~~t~~Ll~lL~~-~F~~V~v~K 344 (399)
+.+|+|+++...... ...+....-.....+..+..+|++||.+++..-.. .....++..+.. -|.-+.+.+
T Consensus 110 ~~~D~i~~~~~~~~~---~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~--~~~~~~~~~~~~~g~~~~~~~~ 181 (214)
T 1yzh_A 110 GEIDRLYLNFSDPWP---KKRHEKRRLTYKTFLDTFKRILPENGEIHFKTDNR--GLFEYSLVSFSQYGMKLNGVWL 181 (214)
T ss_dssp TCCSEEEEESCCCCC---SGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEESCH--HHHHHHHHHHHHHTCEEEEEES
T ss_pred CCCCEEEEECCCCcc---ccchhhhccCCHHHHHHHHHHcCCCcEEEEEeCCH--HHHHHHHHHHHHCCCeeeeccc
Confidence 469999998432111 11111000012233455667899999999975321 123344444443 366555544
No 113
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=94.49 E-value=0.13 Score=50.29 Aligned_cols=68 Identities=9% Similarity=-0.060 Sum_probs=38.6
Q ss_pred CcccEEEecCCCCCCC-CCchhHHHHHHHHHHHHHHHHhccCCCCEEEEeEccCCCCCHHHHHHHHHhcCC
Q psy15838 269 SHCFLVTADGSFDCQG-NPGEQEILVGKLHYREVQIALSLLHNGGNLVIKIFTIFESDTICLMYLLACLFT 338 (399)
Q Consensus 269 ~~vDLV~ADGs~d~sg-~~~~qe~~s~~L~~~el~~Al~~Lr~GG~fVlK~F~~~e~~t~~Ll~lL~~~F~ 338 (399)
..+|+|++|--.-..+ .....+ ........+..|..+|++||.|++=...........+..++...+.
T Consensus 224 ~~fD~Ii~dPP~~~~~~~~~~~~--~~~~~~~ll~~~~~~LkpgG~lli~~~~~~~~~~~~~~~~l~~a~~ 292 (332)
T 2igt_A 224 STYDIILTDPPKFGRGTHGEVWQ--LFDHLPLMLDICREILSPKALGLVLTAYSIRASFYSMHELMRETMR 292 (332)
T ss_dssp CCBSEEEECCCSEEECTTCCEEE--HHHHHHHHHHHHHHTBCTTCCEEEEEECCTTSCHHHHHHHHHHHTT
T ss_pred CCceEEEECCccccCCchHHHHH--HHHHHHHHHHHHHHhcCcCcEEEEEECCCCCCCHHHHHHHHHHHHH
Confidence 4699999986311111 100000 1122344556678999999997776655443345566667775554
No 114
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=94.48 E-value=0.15 Score=50.50 Aligned_cols=111 Identities=7% Similarity=0.023 Sum_probs=60.5
Q ss_pred HHHHhCCCCCCCCCCceEEEeccCCChhHHHHHHhhhccCCCCccceeccccCCCcCCCCCCcEEeccccccccCccccC
Q psy15838 151 EIVHSYNIVPQQENSFTSIHLCEAPGAFITSLNHYLKLHHPRMQWDWIANTLNPHYEGNSFDEMISDDRLILGTHRKWYF 230 (399)
Q Consensus 151 EId~~f~l~~~~~~~~~vlDLceaPGgFsqaln~yl~~~~~~~~w~~~a~sLnP~~e~n~~~~vI~dD~~~~~~~~~w~~ 230 (399)
.+.+.+.+-+. .++||+|||.|.++..+... .++.+|+++++. ++.. ... .
T Consensus 98 ~l~~~~~~~~~----~~VLDiGcG~G~~~~~l~~~--------g~~v~gvD~s~~--------~~~~----a~~-----~ 148 (416)
T 4e2x_A 98 DFLATELTGPD----PFIVEIGCNDGIMLRTIQEA--------GVRHLGFEPSSG--------VAAK----ARE-----K 148 (416)
T ss_dssp HHHHTTTCSSS----CEEEEETCTTTTTHHHHHHT--------TCEEEEECCCHH--------HHHH----HHT-----T
T ss_pred HHHHHhCCCCC----CEEEEecCCCCHHHHHHHHc--------CCcEEEECCCHH--------HHHH----HHH-----c
Confidence 45555554332 49999999999999866542 124556655432 1100 000 0
Q ss_pred CCccccCCCChHHHHHHHHhhhhhhccCCCCCCCCCCCCcccEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHhccCC
Q psy15838 231 GPDNTGNILVQNFVSHFKQHIGFLLIHDTSLAPHCTHASHCFLVTADGSFDCQGNPGEQEILVGKLHYREVQIALSLLHN 310 (399)
Q Consensus 231 G~d~tGDI~~~~~i~~i~~~v~~~~~~~~~~~~~~~~~~~vDLV~ADGs~d~sg~~~~qe~~s~~L~~~el~~Al~~Lr~ 310 (399)
|....-+.......+.+.. ..+++|+|++-.....-. +. ...+.-+..+|+|
T Consensus 149 ~~~~~~~~~~~~~~~~l~~-----------------~~~~fD~I~~~~vl~h~~--d~---------~~~l~~~~r~Lkp 200 (416)
T 4e2x_A 149 GIRVRTDFFEKATADDVRR-----------------TEGPANVIYAANTLCHIP--YV---------QSVLEGVDALLAP 200 (416)
T ss_dssp TCCEECSCCSHHHHHHHHH-----------------HHCCEEEEEEESCGGGCT--TH---------HHHHHHHHHHEEE
T ss_pred CCCcceeeechhhHhhccc-----------------CCCCEEEEEECChHHhcC--CH---------HHHHHHHHHHcCC
Confidence 2222222333333333321 124799999988765432 22 2234455679999
Q ss_pred CCEEEEeE
Q psy15838 311 GGNLVIKI 318 (399)
Q Consensus 311 GG~fVlK~ 318 (399)
||.+++=+
T Consensus 201 gG~l~i~~ 208 (416)
T 4e2x_A 201 DGVFVFED 208 (416)
T ss_dssp EEEEEEEE
T ss_pred CeEEEEEe
Confidence 99999854
No 115
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=94.47 E-value=0.026 Score=53.51 Aligned_cols=33 Identities=9% Similarity=0.028 Sum_probs=22.8
Q ss_pred ceEEEeccCCChhHHHHHHhhhccCCCCccceeccccCC
Q psy15838 166 FTSIHLCEAPGAFITSLNHYLKLHHPRMQWDWIANTLNP 204 (399)
Q Consensus 166 ~~vlDLceaPGgFsqaln~yl~~~~~~~~w~~~a~sLnP 204 (399)
.+|||+|||+|.++..+..... ....+|++++|
T Consensus 48 ~~VLDiGCG~G~~~~~la~~~~------~~~v~gvDis~ 80 (292)
T 3g07_A 48 RDVLDLGCNVGHLTLSIACKWG------PSRMVGLDIDS 80 (292)
T ss_dssp SEEEEESCTTCHHHHHHHHHTC------CSEEEEEESCH
T ss_pred CcEEEeCCCCCHHHHHHHHHcC------CCEEEEECCCH
Confidence 4999999999999987655321 12456666654
No 116
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=94.44 E-value=0.023 Score=48.97 Aligned_cols=32 Identities=9% Similarity=-0.060 Sum_probs=21.8
Q ss_pred ceEEEeccCCChhHHHHHHhhhccCCCCccceeccccCC
Q psy15838 166 FTSIHLCEAPGAFITSLNHYLKLHHPRMQWDWIANTLNP 204 (399)
Q Consensus 166 ~~vlDLceaPGgFsqaln~yl~~~~~~~~w~~~a~sLnP 204 (399)
.++||+|||.|.++..+... + ....+|++++|
T Consensus 33 ~~vLDlGcG~G~~~~~l~~~-----~--~~~v~~vD~~~ 64 (177)
T 2esr_A 33 GRVLDLFAGSGGLAIEAVSR-----G--MSAAVLVEKNR 64 (177)
T ss_dssp CEEEEETCTTCHHHHHHHHT-----T--CCEEEEECCCH
T ss_pred CeEEEeCCCCCHHHHHHHHc-----C--CCEEEEEECCH
Confidence 39999999999998865442 0 12456666554
No 117
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=94.32 E-value=0.38 Score=43.29 Aligned_cols=57 Identities=12% Similarity=0.082 Sum_probs=35.3
Q ss_pred CcccEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHhccCCCCEEEEeEccCCCCCHHHHHHHHHhcCCeeeee
Q psy15838 269 SHCFLVTADGSFDCQGNPGEQEILVGKLHYREVQIALSLLHNGGNLVIKIFTIFESDTICLMYLLACLFTSVDLF 343 (399)
Q Consensus 269 ~~vDLV~ADGs~d~sg~~~~qe~~s~~L~~~el~~Al~~Lr~GG~fVlK~F~~~e~~t~~Ll~lL~~~F~~V~v~ 343 (399)
..+|+|++|.. +..+ .+..+..+|++||.+++-.... .....++..|...|..+.++
T Consensus 157 ~~~D~v~~~~~-------~~~~---------~l~~~~~~L~~gG~l~~~~~~~--~~~~~~~~~l~~~f~~~~~~ 213 (248)
T 2yvl_A 157 GIFHAAFVDVR-------EPWH---------YLEKVHKSLMEGAPVGFLLPTA--NQVIKLLESIENYFGNLEVV 213 (248)
T ss_dssp TCBSEEEECSS-------CGGG---------GHHHHHHHBCTTCEEEEEESSH--HHHHHHHHHSTTTEEEEEEE
T ss_pred CcccEEEECCc-------CHHH---------HHHHHHHHcCCCCEEEEEeCCH--HHHHHHHHHHHhhCCcceEE
Confidence 46999999643 1111 1344578999999999977644 22445555555446555443
No 118
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=94.26 E-value=0.2 Score=49.71 Aligned_cols=64 Identities=16% Similarity=0.084 Sum_probs=37.9
Q ss_pred CcccEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHhccCCCCEEEEeEccCCCCCHHHHHHHHHhcCCeeeee
Q psy15838 269 SHCFLVTADGSFDCQGNPGEQEILVGKLHYREVQIALSLLHNGGNLVIKIFTIFESDTICLMYLLACLFTSVDLF 343 (399)
Q Consensus 269 ~~vDLV~ADGs~d~sg~~~~qe~~s~~L~~~el~~Al~~Lr~GG~fVlK~F~~~e~~t~~Ll~lL~~~F~~V~v~ 343 (399)
+.+|+|++|..+.....-. ..+....+.-+..+|++||.+++=..... .....|...|..+.+.
T Consensus 291 ~~fD~Ii~nppfh~~~~~~------~~~~~~~l~~~~~~LkpgG~l~iv~n~~~-----~~~~~l~~~fg~~~~~ 354 (375)
T 4dcm_A 291 FRFNAVLCNPPFHQQHALT------DNVAWEMFHHARRCLKINGELYIVANRHL-----DYFHKLKKIFGNCTTI 354 (375)
T ss_dssp TCEEEEEECCCC-------------CCHHHHHHHHHHHHEEEEEEEEEEEETTS-----CHHHHHHHHHSCCEEE
T ss_pred CCeeEEEECCCcccCcccC------HHHHHHHHHHHHHhCCCCcEEEEEEECCc-----CHHHHHHHhcCCEEEE
Confidence 5799999997765321111 11222345667789999999999443332 2245567777776654
No 119
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=94.26 E-value=0.18 Score=44.72 Aligned_cols=42 Identities=5% Similarity=-0.209 Sum_probs=27.2
Q ss_pred CcccEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHhccCCCCEEEEeEc
Q psy15838 269 SHCFLVTADGSFDCQGNPGEQEILVGKLHYREVQIALSLLHNGGNLVIKIF 319 (399)
Q Consensus 269 ~~vDLV~ADGs~d~sg~~~~qe~~s~~L~~~el~~Al~~Lr~GG~fVlK~F 319 (399)
+.+|+|++......-..+. ....+..+..+|+|||.+|+-..
T Consensus 101 ~~fD~v~~~~~l~~~~~~~---------~~~~l~~~~~~LkpgG~li~~~~ 142 (217)
T 3jwh_A 101 HGYDAATVIEVIEHLDLSR---------LGAFERVLFEFAQPKIVIVTTPN 142 (217)
T ss_dssp CSCSEEEEESCGGGCCHHH---------HHHHHHHHHTTTCCSEEEEEEEB
T ss_pred CCcCEEeeHHHHHcCCHHH---------HHHHHHHHHHHcCCCEEEEEccC
Confidence 4699999887765432111 12334456689999998876554
No 120
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=94.25 E-value=0.31 Score=46.80 Aligned_cols=49 Identities=16% Similarity=0.111 Sum_probs=31.6
Q ss_pred CcccEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHhccCCCCEEEEeEccCCCCCHHHHHHHHHh
Q psy15838 269 SHCFLVTADGSFDCQGNPGEQEILVGKLHYREVQIALSLLHNGGNLVIKIFTIFESDTICLMYLLAC 335 (399)
Q Consensus 269 ~~vDLV~ADGs~d~sg~~~~qe~~s~~L~~~el~~Al~~Lr~GG~fVlK~F~~~e~~t~~Ll~lL~~ 335 (399)
+.+|+|++|+..... .+..+..+|+|||.+|+-.... .....++..|..
T Consensus 186 ~~fD~V~~~~~~~~~----------------~l~~~~~~LkpgG~lv~~~~~~--~~~~~~~~~l~~ 234 (336)
T 2b25_A 186 LTFDAVALDMLNPHV----------------TLPVFYPHLKHGGVCAVYVVNI--TQVIELLDGIRT 234 (336)
T ss_dssp --EEEEEECSSSTTT----------------THHHHGGGEEEEEEEEEEESSH--HHHHHHHHHHHH
T ss_pred CCeeEEEECCCCHHH----------------HHHHHHHhcCCCcEEEEEeCCH--HHHHHHHHHHHh
Confidence 369999998753211 3455788999999999766544 334555665554
No 121
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=94.23 E-value=0.011 Score=50.46 Aligned_cols=63 Identities=11% Similarity=0.044 Sum_probs=40.8
Q ss_pred CcccEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHhccCCCCEEEEeEccCCCCCHHHHHHHHHhcCCeeeeecCCCC
Q psy15838 269 SHCFLVTADGSFDCQGNPGEQEILVGKLHYREVQIALSLLHNGGNLVIKIFTIFESDTICLMYLLACLFTSVDLFKPATS 348 (399)
Q Consensus 269 ~~vDLV~ADGs~d~sg~~~~qe~~s~~L~~~el~~Al~~Lr~GG~fVlK~F~~~e~~t~~Ll~lL~~~F~~V~v~KP~aS 348 (399)
..+|+|++++. .+.... +..+..+ +||.+|+-.... .....++..|...--.+.+..+..+
T Consensus 99 ~~~D~i~~~~~------~~~~~~---------l~~~~~~--~gG~l~~~~~~~--~~~~~~~~~l~~~g~~~~~~~~~~~ 159 (183)
T 2yxd_A 99 LEFNKAFIGGT------KNIEKI---------IEILDKK--KINHIVANTIVL--ENAAKIINEFESRGYNVDAVNVFIS 159 (183)
T ss_dssp CCCSEEEECSC------SCHHHH---------HHHHHHT--TCCEEEEEESCH--HHHHHHHHHHHHTTCEEEEEEEEEE
T ss_pred CCCcEEEECCc------ccHHHH---------HHHHhhC--CCCEEEEEeccc--ccHHHHHHHHHHcCCeEEEEEeeee
Confidence 46999999987 122111 1111222 999999988665 3366788888887667777766555
Q ss_pred CC
Q psy15838 349 KE 350 (399)
Q Consensus 349 R~ 350 (399)
+.
T Consensus 160 ~~ 161 (183)
T 2yxd_A 160 YA 161 (183)
T ss_dssp EE
T ss_pred hh
Confidence 54
No 122
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=94.21 E-value=0.014 Score=53.22 Aligned_cols=33 Identities=12% Similarity=0.012 Sum_probs=22.5
Q ss_pred ceEEEeccCCChhHHHHHHhhhccCCCCccceeccccCC
Q psy15838 166 FTSIHLCEAPGAFITSLNHYLKLHHPRMQWDWIANTLNP 204 (399)
Q Consensus 166 ~~vlDLceaPGgFsqaln~yl~~~~~~~~w~~~a~sLnP 204 (399)
.++||||||+|.++..+..... ....+|++++|
T Consensus 76 ~~VLDlGcG~G~~~~~la~~~~------~~~v~gvD~s~ 108 (230)
T 1fbn_A 76 SKILYLGASAGTTPSHVADIAD------KGIVYAIEYAP 108 (230)
T ss_dssp CEEEEESCCSSHHHHHHHHHTT------TSEEEEEESCH
T ss_pred CEEEEEcccCCHHHHHHHHHcC------CcEEEEEECCH
Confidence 4899999999999987655432 12355665544
No 123
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=94.21 E-value=0.028 Score=55.99 Aligned_cols=66 Identities=11% Similarity=0.001 Sum_probs=36.0
Q ss_pred CcccEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHhccCCCCEEEEeEccCCCCCHHHHHHHHHhcC
Q psy15838 269 SHCFLVTADGSFDCQGNPGEQEILVGKLHYREVQIALSLLHNGGNLVIKIFTIFESDTICLMYLLACLF 337 (399)
Q Consensus 269 ~~vDLV~ADGs~d~sg~~~~qe~~s~~L~~~el~~Al~~Lr~GG~fVlK~F~~~e~~t~~Ll~lL~~~F 337 (399)
..+|+|++|--....+.....+ ..+.+...+..|..+|+|||.+++=...... ....+...+...+
T Consensus 284 ~~fD~Ii~DPP~~~~~~~~~~~--~~~~~~~ll~~~~~~L~pgG~l~~~~~~~~~-~~~~~~~~i~~~~ 349 (385)
T 2b78_A 284 LTYDIIIIDPPSFARNKKEVFS--VSKDYHKLIRQGLEILSENGLIIASTNAANM-TVSQFKKQIEKGF 349 (385)
T ss_dssp CCEEEEEECCCCC-----CCCC--HHHHHHHHHHHHHHTEEEEEEEEEEECCTTS-CHHHHHHHHHHHH
T ss_pred CCccEEEECCCCCCCChhhHHH--HHHHHHHHHHHHHHhcCCCcEEEEEeCCCcC-CHHHHHHHHHHHH
Confidence 4799999995321111001111 1123334455678999999999987765532 2234455555543
No 124
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=94.17 E-value=0.24 Score=46.25 Aligned_cols=41 Identities=7% Similarity=0.032 Sum_probs=28.2
Q ss_pred CcccEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHhccCCCCEEEEeEcc
Q psy15838 269 SHCFLVTADGSFDCQGNPGEQEILVGKLHYREVQIALSLLHNGGNLVIKIFT 320 (399)
Q Consensus 269 ~~vDLV~ADGs~d~sg~~~~qe~~s~~L~~~el~~Al~~Lr~GG~fVlK~F~ 320 (399)
.++|+|++.+...... +.+ ..+.-+..+|+|||.+++=...
T Consensus 88 ~~fD~v~~~~~l~~~~--~~~---------~~l~~~~~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 88 DKYDIAICHAFLLHMT--TPE---------TMLQKMIHSVKKGGKIICFEPH 128 (284)
T ss_dssp SCEEEEEEESCGGGCS--SHH---------HHHHHHHHTEEEEEEEEEEECC
T ss_pred CCeeEEEECChhhcCC--CHH---------HHHHHHHHHcCCCCEEEEEecc
Confidence 4799999998755432 221 3344566899999999976544
No 125
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=94.17 E-value=0.25 Score=43.48 Aligned_cols=35 Identities=14% Similarity=0.092 Sum_probs=26.0
Q ss_pred CcccEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHhccCCCCEEEEeEcc
Q psy15838 269 SHCFLVTADGSFDCQGNPGEQEILVGKLHYREVQIALSLLHNGGNLVIKIFT 320 (399)
Q Consensus 269 ~~vDLV~ADGs~d~sg~~~~qe~~s~~L~~~el~~Al~~Lr~GG~fVlK~F~ 320 (399)
+++|+|++++...... . -+..+|++||.+|+=+-.
T Consensus 142 ~~~D~i~~~~~~~~~~--~---------------~~~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 142 APFDAIIVTAAPPEIP--T---------------ALMTQLDEGGILVLPVGE 176 (210)
T ss_dssp CCEEEEEESSBCSSCC--T---------------HHHHTEEEEEEEEEEECS
T ss_pred CCccEEEEccchhhhh--H---------------HHHHhcccCcEEEEEEcC
Confidence 4799999998765322 1 146799999999996655
No 126
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=94.16 E-value=0.24 Score=46.16 Aligned_cols=58 Identities=14% Similarity=0.079 Sum_probs=35.2
Q ss_pred CcccEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHhccCCCCEEEEeEccCCCCCHHHHHHHHHhc-CCeeeeec
Q psy15838 269 SHCFLVTADGSFDCQGNPGEQEILVGKLHYREVQIALSLLHNGGNLVIKIFTIFESDTICLMYLLACL-FTSVDLFK 344 (399)
Q Consensus 269 ~~vDLV~ADGs~d~sg~~~~qe~~s~~L~~~el~~Al~~Lr~GG~fVlK~F~~~e~~t~~Ll~lL~~~-F~~V~v~K 344 (399)
..+|+|++|.. +.+ ..+..+..+|++||.+++-.... .....+...|... |..+.+++
T Consensus 178 ~~fD~Vi~~~~-------~~~---------~~l~~~~~~LkpgG~l~i~~~~~--~~~~~~~~~l~~~Gf~~~~~~~ 236 (275)
T 1yb2_A 178 QMYDAVIADIP-------DPW---------NHVQKIASMMKPGSVATFYLPNF--DQSEKTVLSLSASGMHHLETVE 236 (275)
T ss_dssp CCEEEEEECCS-------CGG---------GSHHHHHHTEEEEEEEEEEESSH--HHHHHHHHHSGGGTEEEEEEEE
T ss_pred CCccEEEEcCc-------CHH---------HHHHHHHHHcCCCCEEEEEeCCH--HHHHHHHHHHHHCCCeEEEEEE
Confidence 46999999642 222 22344567999999999876443 1234455555543 66555543
No 127
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=94.16 E-value=0.2 Score=45.72 Aligned_cols=42 Identities=19% Similarity=0.149 Sum_probs=28.9
Q ss_pred CcccEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHhccCCCCEEEEeEccC
Q psy15838 269 SHCFLVTADGSFDCQGNPGEQEILVGKLHYREVQIALSLLHNGGNLVIKIFTI 321 (399)
Q Consensus 269 ~~vDLV~ADGs~d~sg~~~~qe~~s~~L~~~el~~Al~~Lr~GG~fVlK~F~~ 321 (399)
+.+|+|++..+...-. +.. ..+.-+.++|+|||.+++-.+..
T Consensus 102 ~~fD~V~~~~~l~~~~--d~~---------~~l~~~~r~LkpgG~l~~~~~~~ 143 (260)
T 1vl5_A 102 ERFHIVTCRIAAHHFP--NPA---------SFVSEAYRVLKKGGQLLLVDNSA 143 (260)
T ss_dssp TCEEEEEEESCGGGCS--CHH---------HHHHHHHHHEEEEEEEEEEEEEB
T ss_pred CCEEEEEEhhhhHhcC--CHH---------HHHHHHHHHcCCCCEEEEEEcCC
Confidence 5799999987764332 221 23445678999999999976554
No 128
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=94.15 E-value=0.34 Score=41.89 Aligned_cols=115 Identities=12% Similarity=0.102 Sum_probs=66.2
Q ss_pred eEEEeccCCChhHHHHHHhhhccCCCCccceeccccCCCcCCCCCCcEEeccccccccCccccCCCccccCCCChHHHHH
Q psy15838 167 TSIHLCEAPGAFITSLNHYLKLHHPRMQWDWIANTLNPHYEGNSFDEMISDDRLILGTHRKWYFGPDNTGNILVQNFVSH 246 (399)
Q Consensus 167 ~vlDLceaPGgFsqaln~yl~~~~~~~~w~~~a~sLnP~~e~n~~~~vI~dD~~~~~~~~~w~~G~d~tGDI~~~~~i~~ 246 (399)
++||+|||+|.++..+.... +.+|++++|.. +.. ..+.. ...||+.++ .
T Consensus 26 ~vLD~GcG~G~~~~~l~~~~---------~v~gvD~s~~~--------~~~-------~~~~~---~~~~d~~~~--~-- 74 (170)
T 3q87_B 26 IVLDLGTSTGVITEQLRKRN---------TVVSTDLNIRA--------LES-------HRGGN---LVRADLLCS--I-- 74 (170)
T ss_dssp EEEEETCTTCHHHHHHTTTS---------EEEEEESCHHH--------HHT-------CSSSC---EEECSTTTT--B--
T ss_pred eEEEeccCccHHHHHHHhcC---------cEEEEECCHHH--------Hhc-------ccCCe---EEECChhhh--c--
Confidence 99999999999998654321 45666665431 100 11001 257777652 0
Q ss_pred HHHhhhhhhccCCCCCCCCCCCCcccEEEecCCCCCCCCC-------chhHHHHHHHHHHHHHHHHhccCCCCEEEEeEc
Q psy15838 247 FKQHIGFLLIHDTSLAPHCTHASHCFLVTADGSFDCQGNP-------GEQEILVGKLHYREVQIALSLLHNGGNLVIKIF 319 (399)
Q Consensus 247 i~~~v~~~~~~~~~~~~~~~~~~~vDLV~ADGs~d~sg~~-------~~qe~~s~~L~~~el~~Al~~Lr~GG~fVlK~F 319 (399)
..+.+|+|+++........+ +..+ .+.-++..| +||.+++=..
T Consensus 75 --------------------~~~~fD~i~~n~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~l-pgG~l~~~~~ 124 (170)
T 3q87_B 75 --------------------NQESVDVVVFNPPYVPDTDDPIIGGGYLGRE---------VIDRFVDAV-TVGMLYLLVI 124 (170)
T ss_dssp --------------------CGGGCSEEEECCCCBTTCCCTTTBCCGGGCH---------HHHHHHHHC-CSSEEEEEEE
T ss_pred --------------------ccCCCCEEEECCCCccCCccccccCCcchHH---------HHHHHHhhC-CCCEEEEEEe
Confidence 02469999998765533222 1111 111222333 9999998776
Q ss_pred cCCCCCHHHHHHHHHhc-CCeeeeec
Q psy15838 320 TIFESDTICLMYLLACL-FTSVDLFK 344 (399)
Q Consensus 320 ~~~e~~t~~Ll~lL~~~-F~~V~v~K 344 (399)
.. .....+..+|... |+.+.+.+
T Consensus 125 ~~--~~~~~l~~~l~~~gf~~~~~~~ 148 (170)
T 3q87_B 125 EA--NRPKEVLARLEERGYGTRILKV 148 (170)
T ss_dssp GG--GCHHHHHHHHHHTTCEEEEEEE
T ss_pred cC--CCHHHHHHHHHHCCCcEEEEEe
Confidence 55 3367777777664 77666665
No 129
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=94.13 E-value=0.024 Score=47.95 Aligned_cols=43 Identities=14% Similarity=0.147 Sum_probs=27.8
Q ss_pred CcccEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHhccCCCCEEEEeEccCC
Q psy15838 269 SHCFLVTADGSFDCQGNPGEQEILVGKLHYREVQIALSLLHNGGNLVIKIFTIF 322 (399)
Q Consensus 269 ~~vDLV~ADGs~d~sg~~~~qe~~s~~L~~~el~~Al~~Lr~GG~fVlK~F~~~ 322 (399)
.++|+|++|.... + ...+. ...+.. ..+|++||.+++-.....
T Consensus 109 ~~~D~i~~~~~~~--~--~~~~~-~~~~~~------~~~L~~gG~~~~~~~~~~ 151 (171)
T 1ws6_A 109 ERFTVAFMAPPYA--M--DLAAL-FGELLA------SGLVEAGGLYVLQHPKDL 151 (171)
T ss_dssp CCEEEEEECCCTT--S--CTTHH-HHHHHH------HTCEEEEEEEEEEEETTS
T ss_pred CceEEEEECCCCc--h--hHHHH-HHHHHh------hcccCCCcEEEEEeCCcc
Confidence 4699999998754 2 12211 111111 589999999999777654
No 130
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=94.02 E-value=0.28 Score=45.00 Aligned_cols=48 Identities=8% Similarity=0.091 Sum_probs=30.2
Q ss_pred HHHHHHHhCCCCCCCCCCceEEEeccCCChhHHHHHHhhhccCCCCccceeccccCC
Q psy15838 148 KFHEIVHSYNIVPQQENSFTSIHLCEAPGAFITSLNHYLKLHHPRMQWDWIANTLNP 204 (399)
Q Consensus 148 KL~EId~~f~l~~~~~~~~~vlDLceaPGgFsqaln~yl~~~~~~~~w~~~a~sLnP 204 (399)
+...|.+...+-+. .+|||+|||.|.++..+..... +. .+.+|++++|
T Consensus 31 ~~~~l~~~~~~~~~----~~vLDiGcG~G~~~~~l~~~~g---~~--~~v~gvD~s~ 78 (275)
T 3bkx_A 31 HRLAIAEAWQVKPG----EKILEIGCGQGDLSAVLADQVG---SS--GHVTGIDIAS 78 (275)
T ss_dssp HHHHHHHHHTCCTT----CEEEEESCTTSHHHHHHHHHHC---TT--CEEEEECSSC
T ss_pred HHHHHHHHcCCCCC----CEEEEeCCCCCHHHHHHHHHhC---CC--CEEEEEECCc
Confidence 44456666655443 3999999999999987655331 11 2356666654
No 131
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=94.01 E-value=0.1 Score=46.77 Aligned_cols=34 Identities=21% Similarity=0.220 Sum_probs=24.1
Q ss_pred CcccEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHhccCCCCEEEE
Q psy15838 269 SHCFLVTADGSFDCQGNPGEQEILVGKLHYREVQIALSLLHNGGNLVI 316 (399)
Q Consensus 269 ~~vDLV~ADGs~d~sg~~~~qe~~s~~L~~~el~~Al~~Lr~GG~fVl 316 (399)
+.+|+|++|+... .. ...+..+..+|++||.+|+
T Consensus 144 ~~~D~v~~d~~~~-----~~---------~~~l~~~~~~L~pgG~lv~ 177 (229)
T 2avd_A 144 GTFDVAVVDADKE-----NC---------SAYYERCLQLLRPGGILAV 177 (229)
T ss_dssp TCEEEEEECSCST-----TH---------HHHHHHHHHHEEEEEEEEE
T ss_pred CCccEEEECCCHH-----HH---------HHHHHHHHHHcCCCeEEEE
Confidence 5799999997521 11 1234456689999999998
No 132
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=93.99 E-value=0.031 Score=50.53 Aligned_cols=33 Identities=21% Similarity=0.325 Sum_probs=22.0
Q ss_pred ceEEEeccCCChhHHHHHHhhhccCCCCccceeccccCC
Q psy15838 166 FTSIHLCEAPGAFITSLNHYLKLHHPRMQWDWIANTLNP 204 (399)
Q Consensus 166 ~~vlDLceaPGgFsqaln~yl~~~~~~~~w~~~a~sLnP 204 (399)
-.+||||||+|.++..+.... + .++.+|++++|
T Consensus 40 ~~vLDiGcG~G~~~~~la~~~----p--~~~v~giD~s~ 72 (213)
T 2fca_A 40 PIHIEVGTGKGQFISGMAKQN----P--DINYIGIELFK 72 (213)
T ss_dssp CEEEEECCTTSHHHHHHHHHC----T--TSEEEEECSCH
T ss_pred ceEEEEecCCCHHHHHHHHHC----C--CCCEEEEEech
Confidence 389999999999998654421 1 13456665543
No 133
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=93.95 E-value=0.091 Score=45.13 Aligned_cols=44 Identities=18% Similarity=0.102 Sum_probs=27.4
Q ss_pred CcccEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHhccCCCCEEEEeEccCC
Q psy15838 269 SHCFLVTADGSFDCQGNPGEQEILVGKLHYREVQIALSLLHNGGNLVIKIFTIF 322 (399)
Q Consensus 269 ~~vDLV~ADGs~d~sg~~~~qe~~s~~L~~~el~~Al~~Lr~GG~fVlK~F~~~ 322 (399)
..+|+|++|..... + ...+ .... + .+..+|++||.+++=.....
T Consensus 115 ~~fD~i~~~~~~~~-~--~~~~-~~~~-----l-~~~~~L~~gG~l~~~~~~~~ 158 (187)
T 2fhp_A 115 LQFDLVLLDPPYAK-Q--EIVS-QLEK-----M-LERQLLTNEAVIVCETDKTV 158 (187)
T ss_dssp CCEEEEEECCCGGG-C--CHHH-HHHH-----H-HHTTCEEEEEEEEEEEETTC
T ss_pred CCCCEEEECCCCCc-h--hHHH-HHHH-----H-HHhcccCCCCEEEEEeCCcc
Confidence 46999999976331 1 1111 1111 1 35889999999998765543
No 134
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=93.94 E-value=0.68 Score=39.82 Aligned_cols=65 Identities=8% Similarity=-0.145 Sum_probs=38.1
Q ss_pred CcccEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHhccCCCCEEEEeEccCC-----------CCCHHHHHHHHHhcC
Q psy15838 269 SHCFLVTADGSFDCQGNPGEQEILVGKLHYREVQIALSLLHNGGNLVIKIFTIF-----------ESDTICLMYLLACLF 337 (399)
Q Consensus 269 ~~vDLV~ADGs~d~sg~~~~qe~~s~~L~~~el~~Al~~Lr~GG~fVlK~F~~~-----------e~~t~~Ll~lL~~~F 337 (399)
+.+|+|++.+........+. ...+.-+..+|++||.+++-.+... ......+..++.. |
T Consensus 96 ~~~D~v~~~~~l~~~~~~~~---------~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-f 165 (199)
T 2xvm_A 96 RQYDFILSTVVLMFLEAKTI---------PGLIANMQRCTKPGGYNLIVAAMDTADYPCTVGFPFAFKEGELRRYYEG-W 165 (199)
T ss_dssp CCEEEEEEESCGGGSCGGGH---------HHHHHHHHHTEEEEEEEEEEEEBCCSSSCCCSCCSCCBCTTHHHHHTTT-S
T ss_pred CCceEEEEcchhhhCCHHHH---------HHHHHHHHHhcCCCeEEEEEEeeccCCcCCCCCCCCccCHHHHHHHhcC-C
Confidence 46999999887653321111 2234455689999999887553221 1123455566666 7
Q ss_pred Ceeeee
Q psy15838 338 TSVDLF 343 (399)
Q Consensus 338 ~~V~v~ 343 (399)
+-+...
T Consensus 166 ~~~~~~ 171 (199)
T 2xvm_A 166 ERVKYN 171 (199)
T ss_dssp EEEEEE
T ss_pred eEEEec
Confidence 666544
No 135
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=93.91 E-value=0.052 Score=48.53 Aligned_cols=31 Identities=6% Similarity=-0.029 Sum_probs=22.6
Q ss_pred ceEEEeccCCChhHHHHHHhhhccCCCCccceeccccCC
Q psy15838 166 FTSIHLCEAPGAFITSLNHYLKLHHPRMQWDWIANTLNP 204 (399)
Q Consensus 166 ~~vlDLceaPGgFsqaln~yl~~~~~~~~w~~~a~sLnP 204 (399)
.++||+|||.|..+..+... .++.+|+++.|
T Consensus 24 ~~vLD~GCG~G~~~~~la~~--------g~~V~gvD~S~ 54 (203)
T 1pjz_A 24 ARVLVPLCGKSQDMSWLSGQ--------GYHVVGAELSE 54 (203)
T ss_dssp CEEEETTTCCSHHHHHHHHH--------CCEEEEEEECH
T ss_pred CEEEEeCCCCcHhHHHHHHC--------CCeEEEEeCCH
Confidence 39999999999998865442 14567777654
No 136
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=93.82 E-value=0.066 Score=51.64 Aligned_cols=86 Identities=15% Similarity=0.113 Sum_probs=48.8
Q ss_pred CcccEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHhccCCCCEEEEeEccCCC--CCHHHHHHHHHhcCCeeeeec-C
Q psy15838 269 SHCFLVTADGSFDCQGNPGEQEILVGKLHYREVQIALSLLHNGGNLVIKIFTIFE--SDTICLMYLLACLFTSVDLFK-P 345 (399)
Q Consensus 269 ~~vDLV~ADGs~d~sg~~~~qe~~s~~L~~~el~~Al~~Lr~GG~fVlK~F~~~e--~~t~~Ll~lL~~~F~~V~v~K-P 345 (399)
..+|+|++|..... +. . +.+ .....+..+.++|++||.+|+-.-..+. .....+...+...|..|.++. .
T Consensus 167 ~~fD~Ii~d~~~~~-~~-~--~~l---~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~f~~v~~~~~~ 239 (304)
T 2o07_A 167 DAFDVIITDSSDPM-GP-A--ESL---FKESYYQLMKTALKEDGVLCCQGECQWLHLDLIKEMRQFCQSLFPVVAYAYCT 239 (304)
T ss_dssp SCEEEEEEECC------------------CHHHHHHHHHEEEEEEEEEEEECTTTCHHHHHHHHHHHHHHCSEEEEEEEE
T ss_pred CCceEEEECCCCCC-Cc-c--hhh---hHHHHHHHHHhccCCCeEEEEecCCcccchHHHHHHHHHHHHhCCCceeEEEE
Confidence 57999999975322 11 0 000 0112334456899999999997643321 124566778999999988763 2
Q ss_pred CCCCCCCceEEEEEee
Q psy15838 346 ATSKEGNSEIYVICRD 361 (399)
Q Consensus 346 ~aSR~~sSE~YlVc~g 361 (399)
.-+.+...-.+++|..
T Consensus 240 vP~~~~g~~g~~~as~ 255 (304)
T 2o07_A 240 IPTYPSGQIGFMLCSK 255 (304)
T ss_dssp CTTSGGGEEEEEEEES
T ss_pred eccccCcceEEEEEeC
Confidence 2233322235777763
No 137
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=93.77 E-value=3.1 Score=36.73 Aligned_cols=40 Identities=15% Similarity=0.056 Sum_probs=25.5
Q ss_pred CcccEEEecC-CCCCCCCCchhHHHHHHHHHHHHHHHHhccCCCCEEEE
Q psy15838 269 SHCFLVTADG-SFDCQGNPGEQEILVGKLHYREVQIALSLLHNGGNLVI 316 (399)
Q Consensus 269 ~~vDLV~ADG-s~d~sg~~~~qe~~s~~L~~~el~~Al~~Lr~GG~fVl 316 (399)
..+|+|++.+ ...... +.. -....+.-+..+|+|||.+|+
T Consensus 100 ~~fD~v~~~~~~l~~~~--~~~------~~~~~l~~~~~~L~pgG~l~~ 140 (246)
T 1y8c_A 100 RKFDLITCCLDSTNYII--DSD------DLKKYFKAVSNHLKEGGVFIF 140 (246)
T ss_dssp CCEEEEEECTTGGGGCC--SHH------HHHHHHHHHHTTEEEEEEEEE
T ss_pred CCceEEEEcCccccccC--CHH------HHHHHHHHHHHhcCCCcEEEE
Confidence 5699999976 443221 111 122334556789999999998
No 138
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=93.69 E-value=0.054 Score=49.56 Aligned_cols=34 Identities=32% Similarity=0.285 Sum_probs=24.2
Q ss_pred CcccEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHhccCCCCEEEE
Q psy15838 269 SHCFLVTADGSFDCQGNPGEQEILVGKLHYREVQIALSLLHNGGNLVI 316 (399)
Q Consensus 269 ~~vDLV~ADGs~d~sg~~~~qe~~s~~L~~~el~~Al~~Lr~GG~fVl 316 (399)
++||+|++|+... +.. ..+..+..+|+|||.+|+
T Consensus 128 ~~fD~V~~d~~~~-----~~~---------~~l~~~~~~LkpGG~lv~ 161 (221)
T 3dr5_A 128 DSYQLVFGQVSPM-----DLK---------ALVDAAWPLLRRGGALVL 161 (221)
T ss_dssp TCEEEEEECCCTT-----THH---------HHHHHHHHHEEEEEEEEE
T ss_pred CCcCeEEEcCcHH-----HHH---------HHHHHHHHHcCCCcEEEE
Confidence 5799999997532 111 124456789999999998
No 139
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=93.67 E-value=0.19 Score=46.84 Aligned_cols=58 Identities=12% Similarity=0.099 Sum_probs=35.7
Q ss_pred CcccEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHhccCCCCEEEEeEccCCCCCHHHHHHHHHh-cCCeeeeec
Q psy15838 269 SHCFLVTADGSFDCQGNPGEQEILVGKLHYREVQIALSLLHNGGNLVIKIFTIFESDTICLMYLLAC-LFTSVDLFK 344 (399)
Q Consensus 269 ~~vDLV~ADGs~d~sg~~~~qe~~s~~L~~~el~~Al~~Lr~GG~fVlK~F~~~e~~t~~Ll~lL~~-~F~~V~v~K 344 (399)
..+|+|++|.. +.. ..+..+..+|++||.+++-.... .....++..|.. -|..+.+++
T Consensus 180 ~~~D~V~~~~~-------~~~---------~~l~~~~~~L~pgG~l~~~~~~~--~~~~~~~~~l~~~gf~~~~~~~ 238 (277)
T 1o54_A 180 KDVDALFLDVP-------DPW---------NYIDKCWEALKGGGRFATVCPTT--NQVQETLKKLQELPFIRIEVWE 238 (277)
T ss_dssp CSEEEEEECCS-------CGG---------GTHHHHHHHEEEEEEEEEEESSH--HHHHHHHHHHHHSSEEEEEEEC
T ss_pred CccCEEEECCc-------CHH---------HHHHHHHHHcCCCCEEEEEeCCH--HHHHHHHHHHHHCCCceeEEEE
Confidence 46999999752 111 22334567899999999976543 223455555553 376666554
No 140
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=93.62 E-value=0.047 Score=58.88 Aligned_cols=51 Identities=18% Similarity=0.115 Sum_probs=29.2
Q ss_pred CcccEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHhccCCCCEEEEeEc
Q psy15838 269 SHCFLVTADGSFDCQGNPGEQEILVGKLHYREVQIALSLLHNGGNLVIKIF 319 (399)
Q Consensus 269 ~~vDLV~ADGs~d~sg~~~~qe~~s~~L~~~el~~Al~~Lr~GG~fVlK~F 319 (399)
.++|+|++|.-.-..+....+.....+.+..-+..|..+|+|||.+|+=.-
T Consensus 608 ~~fD~Ii~DPP~f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~ 658 (703)
T 3v97_A 608 EQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNN 658 (703)
T ss_dssp CCEEEEEECCCSBC-------CCBHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CCccEEEECCccccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEEC
Confidence 579999999643211111111011123455556678899999999995543
No 141
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=93.54 E-value=0.4 Score=44.41 Aligned_cols=42 Identities=12% Similarity=0.072 Sum_probs=28.9
Q ss_pred CcccEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHhccCCCCEEEEeEccC
Q psy15838 269 SHCFLVTADGSFDCQGNPGEQEILVGKLHYREVQIALSLLHNGGNLVIKIFTI 321 (399)
Q Consensus 269 ~~vDLV~ADGs~d~sg~~~~qe~~s~~L~~~el~~Al~~Lr~GG~fVlK~F~~ 321 (399)
..+|+|++........ +.. ..+.-+..+|+|||.+++-+...
T Consensus 116 ~~fD~v~~~~~l~~~~--d~~---------~~l~~~~~~LkpgG~l~~~~~~~ 157 (279)
T 3ccf_A 116 KPLDAVFSNAMLHWVK--EPE---------AAIASIHQALKSGGRFVAEFGGK 157 (279)
T ss_dssp SCEEEEEEESCGGGCS--CHH---------HHHHHHHHHEEEEEEEEEEEECT
T ss_pred CCcCEEEEcchhhhCc--CHH---------HHHHHHHHhcCCCcEEEEEecCC
Confidence 4699999987765432 221 23344567899999999977654
No 142
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=93.49 E-value=0.018 Score=52.55 Aligned_cols=34 Identities=15% Similarity=0.135 Sum_probs=24.4
Q ss_pred CcccEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHhccCCCCEEEE
Q psy15838 269 SHCFLVTADGSFDCQGNPGEQEILVGKLHYREVQIALSLLHNGGNLVI 316 (399)
Q Consensus 269 ~~vDLV~ADGs~d~sg~~~~qe~~s~~L~~~el~~Al~~Lr~GG~fVl 316 (399)
+.+|+|++|+... . ....+..+..+|+|||.+|+
T Consensus 141 ~~fD~V~~~~~~~-----~---------~~~~l~~~~~~LkpgG~lv~ 174 (232)
T 3ntv_A 141 KVYDMIFIDAAKA-----Q---------SKKFFEIYTPLLKHQGLVIT 174 (232)
T ss_dssp SCEEEEEEETTSS-----S---------HHHHHHHHGGGEEEEEEEEE
T ss_pred CCccEEEEcCcHH-----H---------HHHHHHHHHHhcCCCeEEEE
Confidence 4699999997532 1 11234556799999999988
No 143
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=93.47 E-value=0.4 Score=44.25 Aligned_cols=58 Identities=16% Similarity=0.127 Sum_probs=37.7
Q ss_pred CcccEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHhccCCCCEEEEeEccCCCCCHHHHHHHHHh--cCCeeeeec
Q psy15838 269 SHCFLVTADGSFDCQGNPGEQEILVGKLHYREVQIALSLLHNGGNLVIKIFTIFESDTICLMYLLAC--LFTSVDLFK 344 (399)
Q Consensus 269 ~~vDLV~ADGs~d~sg~~~~qe~~s~~L~~~el~~Al~~Lr~GG~fVlK~F~~~e~~t~~Ll~lL~~--~F~~V~v~K 344 (399)
..+|+|++|+.. .. ..+..+..+|++||.+|+=.... .....++..|.. .|..+.++.
T Consensus 170 ~~~D~v~~~~~~-------~~---------~~l~~~~~~L~pgG~l~~~~~~~--~~~~~~~~~l~~~~~f~~~~~~~ 229 (280)
T 1i9g_A 170 GSVDRAVLDMLA-------PW---------EVLDAVSRLLVAGGVLMVYVATV--TQLSRIVEALRAKQCWTEPRAWE 229 (280)
T ss_dssp TCEEEEEEESSC-------GG---------GGHHHHHHHEEEEEEEEEEESSH--HHHHHHHHHHHHHSSBCCCEEEC
T ss_pred CceeEEEECCcC-------HH---------HHHHHHHHhCCCCCEEEEEeCCH--HHHHHHHHHHHhcCCcCCcEEEE
Confidence 469999997641 11 12445677899999999977654 234566666664 576665543
No 144
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=93.43 E-value=0.55 Score=44.48 Aligned_cols=54 Identities=20% Similarity=0.138 Sum_probs=31.4
Q ss_pred CcccEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHhccCCCCEEEEeEccCCCCCHHHHHHH
Q psy15838 269 SHCFLVTADGSFDCQGNPGEQEILVGKLHYREVQIALSLLHNGGNLVIKIFTIFESDTICLMYL 332 (399)
Q Consensus 269 ~~vDLV~ADGs~d~sg~~~~qe~~s~~L~~~el~~Al~~Lr~GG~fVlK~F~~~e~~t~~Ll~l 332 (399)
+.+|+|+|+.....-. ..+ ....+..+..+| |||.+++=+..++......++..
T Consensus 109 ~~fD~Vv~~~~l~~~~---~~~------~~~~l~~l~~lL-PGG~l~lS~~~g~~~~d~~~l~~ 162 (261)
T 3iv6_A 109 GHFDFVLNDRLINRFT---TEE------ARRACLGMLSLV-GSGTVRASVKLGFYDIDLKLIEY 162 (261)
T ss_dssp TCCSEEEEESCGGGSC---HHH------HHHHHHHHHHHH-TTSEEEEEEEBSCCHHHHHHHHH
T ss_pred CCccEEEEhhhhHhCC---HHH------HHHHHHHHHHhC-cCcEEEEEeccCcccccHHHHHH
Confidence 5799999998764211 111 112233344678 99999987776654333444443
No 145
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=93.37 E-value=0.064 Score=51.59 Aligned_cols=44 Identities=11% Similarity=0.138 Sum_probs=28.5
Q ss_pred CcccEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHhccCCCCEEEEeEcc
Q psy15838 269 SHCFLVTADGSFDCQGNPGEQEILVGKLHYREVQIALSLLHNGGNLVIKIFT 320 (399)
Q Consensus 269 ~~vDLV~ADGs~d~sg~~~~qe~~s~~L~~~el~~Al~~Lr~GG~fVlK~F~ 320 (399)
+.+|+|+|=.+....-... + . ...+.-+.++|+|||.||+-+..
T Consensus 128 ~~FD~V~~~~~lhy~~~~~--~-~-----~~~l~~~~r~LkpGG~~i~~~~~ 171 (302)
T 2vdw_A 128 GKFNIIDWQFAIHYSFHPR--H-Y-----ATVMNNLSELTASGGKVLITTMD 171 (302)
T ss_dssp SCEEEEEEESCGGGTCSTT--T-H-----HHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CCeeEEEECchHHHhCCHH--H-H-----HHHHHHHHHHcCCCCEEEEEeCC
Confidence 5799999876653221111 1 1 24455667899999999986654
No 146
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=93.35 E-value=0.42 Score=43.47 Aligned_cols=33 Identities=21% Similarity=0.180 Sum_probs=23.6
Q ss_pred CcccEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHhccCCCCEEEE
Q psy15838 269 SHCFLVTADGSFDCQGNPGEQEILVGKLHYREVQIALSLLHNGGNLVI 316 (399)
Q Consensus 269 ~~vDLV~ADGs~d~sg~~~~qe~~s~~L~~~el~~Al~~Lr~GG~fVl 316 (399)
..+|+|++++.. + ....+..+..+|++||.||+
T Consensus 140 ~~fD~V~~~~~~------~---------~~~~l~~~~~~LkpgG~l~~ 172 (240)
T 1xdz_A 140 ESYDIVTARAVA------R---------LSVLSELCLPLVKKNGLFVA 172 (240)
T ss_dssp TCEEEEEEECCS------C---------HHHHHHHHGGGEEEEEEEEE
T ss_pred CCccEEEEeccC------C---------HHHHHHHHHHhcCCCCEEEE
Confidence 579999998731 1 12334556789999999987
No 147
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=93.34 E-value=0.24 Score=45.29 Aligned_cols=42 Identities=14% Similarity=0.018 Sum_probs=26.7
Q ss_pred CcccEEEecC-CCCCCCCCchhHHHHHHHHHHHHHHHHhccCCCCEEEEeE
Q psy15838 269 SHCFLVTADG-SFDCQGNPGEQEILVGKLHYREVQIALSLLHNGGNLVIKI 318 (399)
Q Consensus 269 ~~vDLV~ADG-s~d~sg~~~~qe~~s~~L~~~el~~Al~~Lr~GG~fVlK~ 318 (399)
..+|+|++.+ ....-. +.+ -....+.-+..+|+|||.||+=.
T Consensus 109 ~~fD~v~~~~~~l~~~~--~~~------~~~~~l~~~~~~L~pgG~l~i~~ 151 (263)
T 3pfg_A 109 RRFSAVTCMFSSIGHLA--GQA------ELDAALERFAAHVLPDGVVVVEP 151 (263)
T ss_dssp CCEEEEEECTTGGGGSC--HHH------HHHHHHHHHHHTEEEEEEEEECC
T ss_pred CCcCEEEEcCchhhhcC--CHH------HHHHHHHHHHHhcCCCcEEEEEe
Confidence 5799999986 443221 111 12233445668999999999954
No 148
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=93.32 E-value=0.1 Score=48.53 Aligned_cols=60 Identities=15% Similarity=0.043 Sum_probs=40.7
Q ss_pred CcccEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHhccCCCCEEEEeEccCCCCCHHHHHHHHHhc-CCeeeeec
Q psy15838 269 SHCFLVTADGSFDCQGNPGEQEILVGKLHYREVQIALSLLHNGGNLVIKIFTIFESDTICLMYLLACL-FTSVDLFK 344 (399)
Q Consensus 269 ~~vDLV~ADGs~d~sg~~~~qe~~s~~L~~~el~~Al~~Lr~GG~fVlK~F~~~e~~t~~Ll~lL~~~-F~~V~v~K 344 (399)
+++|+|+++...+ .....+..+..+|+|||.+|+-.+.. .....+...+... |+-+.+..
T Consensus 183 ~~fD~Vv~n~~~~--------------~~~~~l~~~~~~LkpgG~lils~~~~--~~~~~v~~~l~~~Gf~~~~~~~ 243 (254)
T 2nxc_A 183 GPFDLLVANLYAE--------------LHAALAPRYREALVPGGRALLTGILK--DRAPLVREAMAGAGFRPLEEAA 243 (254)
T ss_dssp CCEEEEEEECCHH--------------HHHHHHHHHHHHEEEEEEEEEEEEEG--GGHHHHHHHHHHTTCEEEEEEE
T ss_pred CCCCEEEECCcHH--------------HHHHHHHHHHHHcCCCCEEEEEeecc--CCHHHHHHHHHHCCCEEEEEec
Confidence 4699999975321 12334555678999999999976555 3366777777776 87766543
No 149
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=93.32 E-value=0.23 Score=46.18 Aligned_cols=43 Identities=9% Similarity=-0.030 Sum_probs=27.9
Q ss_pred CCcccEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHhccCCCCEEEEeEc
Q psy15838 268 ASHCFLVTADGSFDCQGNPGEQEILVGKLHYREVQIALSLLHNGGNLVIKIF 319 (399)
Q Consensus 268 ~~~vDLV~ADGs~d~sg~~~~qe~~s~~L~~~el~~Al~~Lr~GG~fVlK~F 319 (399)
.+.+|+|++.+.......+.. ...+.-+..+|++||.+++=.+
T Consensus 182 ~~~fD~i~~~~~~~~~~~~~~---------~~~l~~~~~~LkpgG~l~i~~~ 224 (286)
T 3m70_A 182 QENYDFIVSTVVFMFLNRERV---------PSIIKNMKEHTNVGGYNLIVAA 224 (286)
T ss_dssp CSCEEEEEECSSGGGSCGGGH---------HHHHHHHHHTEEEEEEEEEEEE
T ss_pred cCCccEEEEccchhhCCHHHH---------HHHHHHHHHhcCCCcEEEEEEe
Confidence 357999999987654322221 2234445689999999887443
No 150
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=93.30 E-value=0.29 Score=42.98 Aligned_cols=43 Identities=19% Similarity=0.227 Sum_probs=30.2
Q ss_pred CcccEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHhccCCCCEEEEeEccCC
Q psy15838 269 SHCFLVTADGSFDCQGNPGEQEILVGKLHYREVQIALSLLHNGGNLVIKIFTIF 322 (399)
Q Consensus 269 ~~vDLV~ADGs~d~sg~~~~qe~~s~~L~~~el~~Al~~Lr~GG~fVlK~F~~~ 322 (399)
+.+|+|++........ +.+ ..+.-+..+|+|||.+|+-.+...
T Consensus 94 ~~fD~v~~~~~l~~~~--~~~---------~~l~~~~~~L~pgG~l~i~~~~~~ 136 (211)
T 2gs9_A 94 ESFDVVLLFTTLEFVE--DVE---------RVLLEARRVLRPGGALVVGVLEAL 136 (211)
T ss_dssp SCEEEEEEESCTTTCS--CHH---------HHHHHHHHHEEEEEEEEEEEECTT
T ss_pred CcEEEEEEcChhhhcC--CHH---------HHHHHHHHHcCCCCEEEEEecCCc
Confidence 5799999987765332 221 233445678999999999988763
No 151
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=93.27 E-value=0.17 Score=47.70 Aligned_cols=115 Identities=12% Similarity=0.063 Sum_probs=62.4
Q ss_pred ceEEEeccCC---ChhHHHHHHhhhccCCCCccceeccccCCCcCCCCCCcEEeccccccccCccccCCCccccCCCChH
Q psy15838 166 FTSIHLCEAP---GAFITSLNHYLKLHHPRMQWDWIANTLNPHYEGNSFDEMISDDRLILGTHRKWYFGPDNTGNILVQN 242 (399)
Q Consensus 166 ~~vlDLceaP---GgFsqaln~yl~~~~~~~~w~~~a~sLnP~~e~n~~~~vI~dD~~~~~~~~~w~~G~d~tGDI~~~~ 242 (399)
.++||||||+ |.++..+.... + ..+.+++++.|. |+..-+-.....++.. ...||+.+..
T Consensus 79 ~~vLDlGcG~pt~G~~~~~~~~~~----p--~~~v~~vD~sp~--------~l~~Ar~~~~~~~~v~---~~~~D~~~~~ 141 (274)
T 2qe6_A 79 SQFLDLGSGLPTVQNTHEVAQSVN----P--DARVVYVDIDPM--------VLTHGRALLAKDPNTA---VFTADVRDPE 141 (274)
T ss_dssp CEEEEETCCSCCSSCHHHHHHHHC----T--TCEEEEEESSHH--------HHHHHHHHHTTCTTEE---EEECCTTCHH
T ss_pred CEEEEECCCCCCCChHHHHHHHhC----C--CCEEEEEECChH--------HHHHHHHhcCCCCCeE---EEEeeCCCch
Confidence 4999999999 98876554321 1 134566666542 1111000000011111 2789998865
Q ss_pred HHH---HHHHhhhhhhccCCCCCCCCCCCCcccEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHhccCCCCEEEEeEc
Q psy15838 243 FVS---HFKQHIGFLLIHDTSLAPHCTHASHCFLVTADGSFDCQGNPGEQEILVGKLHYREVQIALSLLHNGGNLVIKIF 319 (399)
Q Consensus 243 ~i~---~i~~~v~~~~~~~~~~~~~~~~~~~vDLV~ADGs~d~sg~~~~qe~~s~~L~~~el~~Al~~Lr~GG~fVlK~F 319 (399)
.+- .+...+ ....+|+|++-+....-.+... ...+.-+...|+|||.|++-.+
T Consensus 142 ~~~~~~~~~~~~---------------d~~~~d~v~~~~vlh~~~d~~~---------~~~l~~~~~~L~pGG~l~i~~~ 197 (274)
T 2qe6_A 142 YILNHPDVRRMI---------------DFSRPAAIMLVGMLHYLSPDVV---------DRVVGAYRDALAPGSYLFMTSL 197 (274)
T ss_dssp HHHHSHHHHHHC---------------CTTSCCEEEETTTGGGSCTTTH---------HHHHHHHHHHSCTTCEEEEEEE
T ss_pred hhhccchhhccC---------------CCCCCEEEEEechhhhCCcHHH---------HHHHHHHHHhCCCCcEEEEEEe
Confidence 431 111211 1236899998877553322111 1223445678999999999888
Q ss_pred cC
Q psy15838 320 TI 321 (399)
Q Consensus 320 ~~ 321 (399)
..
T Consensus 198 ~~ 199 (274)
T 2qe6_A 198 VD 199 (274)
T ss_dssp BC
T ss_pred cC
Confidence 76
No 152
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=93.26 E-value=0.19 Score=44.45 Aligned_cols=46 Identities=15% Similarity=0.170 Sum_probs=29.7
Q ss_pred CCcccEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHhccCCCCEEEEeEccC
Q psy15838 268 ASHCFLVTADGSFDCQGNPGEQEILVGKLHYREVQIALSLLHNGGNLVIKIFTI 321 (399)
Q Consensus 268 ~~~vDLV~ADGs~d~sg~~~~qe~~s~~L~~~el~~Al~~Lr~GG~fVlK~F~~ 321 (399)
...+|+|++.+....-.+ .++ ....+.-+.++|+|||.+|+-.+..
T Consensus 99 ~~~~D~v~~~~~l~~~~~--~~~------~~~~l~~~~~~L~pgG~l~~~~~~~ 144 (235)
T 3sm3_A 99 DSSFDFAVMQAFLTSVPD--PKE------RSRIIKEVFRVLKPGAYLYLVEFGQ 144 (235)
T ss_dssp TTCEEEEEEESCGGGCCC--HHH------HHHHHHHHHHHEEEEEEEEEEEEBC
T ss_pred CCceeEEEEcchhhcCCC--HHH------HHHHHHHHHHHcCCCeEEEEEECCc
Confidence 357999999876553322 211 1133445668999999999976643
No 153
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=93.23 E-value=0.16 Score=46.05 Aligned_cols=45 Identities=13% Similarity=0.124 Sum_probs=30.1
Q ss_pred CCcccEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHhccCCCCEEEEeEccC
Q psy15838 268 ASHCFLVTADGSFDCQGNPGEQEILVGKLHYREVQIALSLLHNGGNLVIKIFTI 321 (399)
Q Consensus 268 ~~~vDLV~ADGs~d~sg~~~~qe~~s~~L~~~el~~Al~~Lr~GG~fVlK~F~~ 321 (399)
.+.+|+|++.+....-+.++ ....+.-+..+|+|||.+|+-.+..
T Consensus 118 ~~~fD~v~~~~~l~~~~~~~---------~~~~l~~~~~~L~pgG~l~~~~~~~ 162 (266)
T 3ujc_A 118 ENNFDLIYSRDAILALSLEN---------KNKLFQKCYKWLKPTGTLLITDYCA 162 (266)
T ss_dssp TTCEEEEEEESCGGGSCHHH---------HHHHHHHHHHHEEEEEEEEEEEEEE
T ss_pred CCcEEEEeHHHHHHhcChHH---------HHHHHHHHHHHcCCCCEEEEEEecc
Confidence 35799999987665432111 1233445667999999999987654
No 154
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=93.22 E-value=0.35 Score=42.79 Aligned_cols=42 Identities=7% Similarity=-0.118 Sum_probs=26.5
Q ss_pred CcccEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHhccCCCCEEEEeEc
Q psy15838 269 SHCFLVTADGSFDCQGNPGEQEILVGKLHYREVQIALSLLHNGGNLVIKIF 319 (399)
Q Consensus 269 ~~vDLV~ADGs~d~sg~~~~qe~~s~~L~~~el~~Al~~Lr~GG~fVlK~F 319 (399)
+.+|+|++......-. +.+ ....+.-+..+|+|||.+|.=..
T Consensus 101 ~~fD~V~~~~~l~~~~--~~~-------~~~~l~~~~~~LkpgG~~i~~~~ 142 (219)
T 3jwg_A 101 SGYDAATVIEVIEHLD--ENR-------LQAFEKVLFEFTRPQTVIVSTPN 142 (219)
T ss_dssp TTCSEEEEESCGGGCC--HHH-------HHHHHHHHHTTTCCSEEEEEEEB
T ss_pred CCCCEEEEHHHHHhCC--HHH-------HHHHHHHHHHhhCCCEEEEEccc
Confidence 4699999877655331 111 22334556789999997776444
No 155
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=93.21 E-value=0.46 Score=43.82 Aligned_cols=47 Identities=11% Similarity=0.068 Sum_probs=30.1
Q ss_pred CCcccEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHhccCCCCEEEEeEccC
Q psy15838 268 ASHCFLVTADGSFDCQGNPGEQEILVGKLHYREVQIALSLLHNGGNLVIKIFTI 321 (399)
Q Consensus 268 ~~~vDLV~ADGs~d~sg~~~~qe~~s~~L~~~el~~Al~~Lr~GG~fVlK~F~~ 321 (399)
.+.+|+|++.+.....-. .. .-....+.-+..+|+|||.+|+-+...
T Consensus 131 ~~~fD~v~~~~~l~~~~~-~~------~~~~~~l~~~~~~LkpgG~l~~~~~~~ 177 (298)
T 1ri5_A 131 GKEFDVISSQFSFHYAFS-TS------ESLDIAQRNIARHLRPGGYFIMTVPSR 177 (298)
T ss_dssp SSCEEEEEEESCGGGGGS-SH------HHHHHHHHHHHHTEEEEEEEEEEEECH
T ss_pred CCCcCEEEECchhhhhcC-CH------HHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 357999999987642100 11 112334555678999999999987554
No 156
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=93.20 E-value=0.15 Score=48.21 Aligned_cols=84 Identities=13% Similarity=0.125 Sum_probs=49.5
Q ss_pred CcccEEEecCCCCCCCCCchhHHHHHHH-HHHHHHHHHhccCCCCEEEEeEccCC--CCCHHHHHHHHHhcCCeeeeecC
Q psy15838 269 SHCFLVTADGSFDCQGNPGEQEILVGKL-HYREVQIALSLLHNGGNLVIKIFTIF--ESDTICLMYLLACLFTSVDLFKP 345 (399)
Q Consensus 269 ~~vDLV~ADGs~d~sg~~~~qe~~s~~L-~~~el~~Al~~Lr~GG~fVlK~F~~~--e~~t~~Ll~lL~~~F~~V~v~KP 345 (399)
+.+|+|++|..... +.+. .| ....+..+...|++||.+|+-.-... ......+...+...|..|.++.-
T Consensus 151 ~~fD~Ii~d~~~~~-~~~~-------~l~~~~~l~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~f~~v~~~~~ 222 (281)
T 1mjf_A 151 RGFDVIIADSTDPV-GPAK-------VLFSEEFYRYVYDALNNPGIYVTQAGSVYLFTDELISAYKEMKKVFDRVYYYSF 222 (281)
T ss_dssp CCEEEEEEECCCCC-------------TTSHHHHHHHHHHEEEEEEEEEEEEETTTSHHHHHHHHHHHHHHCSEEEEEEE
T ss_pred CCeeEEEECCCCCC-Ccch-------hhhHHHHHHHHHHhcCCCcEEEEEcCCcccCHHHHHHHHHHHHHHCCceEEEEE
Confidence 46999999975322 1110 11 11223345689999999999753321 12345667788888999887652
Q ss_pred -CCCCCCCceEEEEEee
Q psy15838 346 -ATSKEGNSEIYVICRD 361 (399)
Q Consensus 346 -~aSR~~sSE~YlVc~g 361 (399)
..+. ...-.+++|..
T Consensus 223 ~vP~~-~g~~~~~~as~ 238 (281)
T 1mjf_A 223 PVIGY-ASPWAFLVGVK 238 (281)
T ss_dssp CCTTS-SSSEEEEEEEE
T ss_pred ecCCC-CceEEEEEeeC
Confidence 2222 33456777764
No 157
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=93.13 E-value=0.47 Score=42.88 Aligned_cols=19 Identities=16% Similarity=0.095 Sum_probs=16.0
Q ss_pred ceEEEeccCCChhHHHHHH
Q psy15838 166 FTSIHLCEAPGAFITSLNH 184 (399)
Q Consensus 166 ~~vlDLceaPGgFsqaln~ 184 (399)
.++||||||+|.++..+..
T Consensus 43 ~~vLDlGcG~G~~~~~l~~ 61 (252)
T 1wzn_A 43 RRVLDLACGTGIPTLELAE 61 (252)
T ss_dssp CEEEEETCTTCHHHHHHHH
T ss_pred CEEEEeCCCCCHHHHHHHH
Confidence 4999999999999886544
No 158
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=93.10 E-value=0.019 Score=52.01 Aligned_cols=35 Identities=11% Similarity=0.098 Sum_probs=25.3
Q ss_pred CcccEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHhccCCCCEEEEe
Q psy15838 269 SHCFLVTADGSFDCQGNPGEQEILVGKLHYREVQIALSLLHNGGNLVIK 317 (399)
Q Consensus 269 ~~vDLV~ADGs~d~sg~~~~qe~~s~~L~~~el~~Al~~Lr~GG~fVlK 317 (399)
+.+|+|++|+... + ....+..+..+|++||.+|+=
T Consensus 125 ~~fD~I~~~~~~~-----~---------~~~~l~~~~~~L~pgG~lv~~ 159 (233)
T 2gpy_A 125 PLFDVLFIDAAKG-----Q---------YRRFFDMYSPMVRPGGLILSD 159 (233)
T ss_dssp CCEEEEEEEGGGS-----C---------HHHHHHHHGGGEEEEEEEEEE
T ss_pred CCccEEEECCCHH-----H---------HHHHHHHHHHHcCCCeEEEEE
Confidence 4699999987642 1 122345567899999999985
No 159
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=93.08 E-value=0.26 Score=43.51 Aligned_cols=43 Identities=9% Similarity=-0.048 Sum_probs=27.9
Q ss_pred CcccEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHhccCCCCEEEEeEcc
Q psy15838 269 SHCFLVTADGSFDCQGNPGEQEILVGKLHYREVQIALSLLHNGGNLVIKIFT 320 (399)
Q Consensus 269 ~~vDLV~ADGs~d~sg~~~~qe~~s~~L~~~el~~Al~~Lr~GG~fVlK~F~ 320 (399)
+.+|+|++.........++ ....+.-+..+|++||.+|+-...
T Consensus 102 ~~~D~v~~~~~~~~~~~~~---------~~~~l~~~~~~L~~gG~l~~~~~~ 144 (227)
T 1ve3_A 102 KTFDYVIFIDSIVHFEPLE---------LNQVFKEVRRVLKPSGKFIMYFTD 144 (227)
T ss_dssp TCEEEEEEESCGGGCCHHH---------HHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CcEEEEEEcCchHhCCHHH---------HHHHHHHHHHHcCCCcEEEEEecC
Confidence 4799999986632221111 122345567889999999987665
No 160
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=93.08 E-value=0.39 Score=41.84 Aligned_cols=53 Identities=13% Similarity=0.076 Sum_probs=31.4
Q ss_pred CcccEEEecCCCCCC----CCCchhHHHHHHHHHHHHHHHHhccCCCCEEEEeEccC
Q psy15838 269 SHCFLVTADGSFDCQ----GNPGEQEILVGKLHYREVQIALSLLHNGGNLVIKIFTI 321 (399)
Q Consensus 269 ~~vDLV~ADGs~d~s----g~~~~qe~~s~~L~~~el~~Al~~Lr~GG~fVlK~F~~ 321 (399)
+.+|+|++.+..+.. +.+-........-....+.-+..+|++||.+|+-.+..
T Consensus 106 ~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~ 162 (215)
T 2pxx_A 106 ASFDVVLEKGTLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTSAA 162 (215)
T ss_dssp SCEEEEEEESHHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred CcccEEEECcchhhhccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeCCC
Confidence 569999998765321 11100000011223445556678999999999988765
No 161
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=93.04 E-value=0.19 Score=43.97 Aligned_cols=38 Identities=18% Similarity=0.190 Sum_probs=26.1
Q ss_pred CcccEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHhccCCCCEEEEe
Q psy15838 269 SHCFLVTADGSFDCQGNPGEQEILVGKLHYREVQIALSLLHNGGNLVIK 317 (399)
Q Consensus 269 ~~vDLV~ADGs~d~sg~~~~qe~~s~~L~~~el~~Al~~Lr~GG~fVlK 317 (399)
+.+|+|++.+....- ++.. ..+.-+..+|+|||.+++=
T Consensus 110 ~~~D~v~~~~~l~~~--~~~~---------~~l~~~~~~L~pgG~l~~~ 147 (219)
T 3dlc_A 110 NYADLIVSRGSVFFW--EDVA---------TAFREIYRILKSGGKTYIG 147 (219)
T ss_dssp TCEEEEEEESCGGGC--SCHH---------HHHHHHHHHEEEEEEEEEE
T ss_pred ccccEEEECchHhhc--cCHH---------HHHHHHHHhCCCCCEEEEE
Confidence 579999998875543 2221 2344456789999999984
No 162
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=93.00 E-value=0.43 Score=41.94 Aligned_cols=42 Identities=7% Similarity=0.026 Sum_probs=29.2
Q ss_pred CcccEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHhccCCCCEEEEeEccC
Q psy15838 269 SHCFLVTADGSFDCQGNPGEQEILVGKLHYREVQIALSLLHNGGNLVIKIFTI 321 (399)
Q Consensus 269 ~~vDLV~ADGs~d~sg~~~~qe~~s~~L~~~el~~Al~~Lr~GG~fVlK~F~~ 321 (399)
+.+|+|++.+...... +.. ..+..+..+|++||.+|+-+...
T Consensus 92 ~~fD~v~~~~~l~~~~--~~~---------~~l~~~~~~L~~gG~l~~~~~~~ 133 (230)
T 3cc8_A 92 EQFDCVIFGDVLEHLF--DPW---------AVIEKVKPYIKQNGVILASIPNV 133 (230)
T ss_dssp TCEEEEEEESCGGGSS--CHH---------HHHHHTGGGEEEEEEEEEEEECT
T ss_pred CccCEEEECChhhhcC--CHH---------HHHHHHHHHcCCCCEEEEEeCCc
Confidence 5799999977654322 211 34455678999999999987654
No 163
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=92.97 E-value=0.12 Score=46.31 Aligned_cols=21 Identities=5% Similarity=0.237 Sum_probs=17.5
Q ss_pred ceEEEeccCCChhHHHHHHhh
Q psy15838 166 FTSIHLCEAPGAFITSLNHYL 186 (399)
Q Consensus 166 ~~vlDLceaPGgFsqaln~yl 186 (399)
.++||+|||+|+++..+.+..
T Consensus 79 ~~vLDiG~G~G~~~~~la~~~ 99 (226)
T 1i1n_A 79 AKALDVGSGSGILTACFARMV 99 (226)
T ss_dssp CEEEEETCTTSHHHHHHHHHH
T ss_pred CEEEEEcCCcCHHHHHHHHHh
Confidence 499999999999998766543
No 164
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=92.97 E-value=0.26 Score=43.79 Aligned_cols=17 Identities=6% Similarity=-0.035 Sum_probs=14.6
Q ss_pred ceEEEeccCCChhHHHH
Q psy15838 166 FTSIHLCEAPGAFITSL 182 (399)
Q Consensus 166 ~~vlDLceaPGgFsqal 182 (399)
.++||||||+|+++..+
T Consensus 55 ~~vLDlGcGtG~~~~~~ 71 (201)
T 2ift_A 55 SECLDGFAGSGSLGFEA 71 (201)
T ss_dssp CEEEETTCTTCHHHHHH
T ss_pred CeEEEcCCccCHHHHHH
Confidence 38999999999998753
No 165
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=92.93 E-value=0.26 Score=44.07 Aligned_cols=43 Identities=16% Similarity=0.141 Sum_probs=29.6
Q ss_pred CCcccEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHhccCCCCEEEEeEccC
Q psy15838 268 ASHCFLVTADGSFDCQGNPGEQEILVGKLHYREVQIALSLLHNGGNLVIKIFTI 321 (399)
Q Consensus 268 ~~~vDLV~ADGs~d~sg~~~~qe~~s~~L~~~el~~Al~~Lr~GG~fVlK~F~~ 321 (399)
.+.+|+|++-...... ++.. ..+.-+..+|+|||.+++=.+..
T Consensus 114 ~~~fD~v~~~~~l~~~--~~~~---------~~l~~~~~~L~pgG~l~i~~~~~ 156 (242)
T 3l8d_A 114 NEQFEAIMAINSLEWT--EEPL---------RALNEIKRVLKSDGYACIAILGP 156 (242)
T ss_dssp TTCEEEEEEESCTTSS--SCHH---------HHHHHHHHHEEEEEEEEEEEECT
T ss_pred CCCccEEEEcChHhhc--cCHH---------HHHHHHHHHhCCCeEEEEEEcCC
Confidence 3579999998776543 2221 23455668999999999977544
No 166
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=92.92 E-value=0.33 Score=43.93 Aligned_cols=56 Identities=16% Similarity=0.017 Sum_probs=33.5
Q ss_pred CcccEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHhccCCCCEEEEeEccCCCCCHHHHHHHHHh-cCCeeee
Q psy15838 269 SHCFLVTADGSFDCQGNPGEQEILVGKLHYREVQIALSLLHNGGNLVIKIFTIFESDTICLMYLLAC-LFTSVDL 342 (399)
Q Consensus 269 ~~vDLV~ADGs~d~sg~~~~qe~~s~~L~~~el~~Al~~Lr~GG~fVlK~F~~~e~~t~~Ll~lL~~-~F~~V~v 342 (399)
+.+|+|++|.. +.. ..+..+..+|++||.+++=.... .....++..|.. -|..+.+
T Consensus 165 ~~~D~v~~~~~-------~~~---------~~l~~~~~~L~~gG~l~~~~~~~--~~~~~~~~~l~~~gf~~~~~ 221 (258)
T 2pwy_A 165 AAYDGVALDLM-------EPW---------KVLEKAALALKPDRFLVAYLPNI--TQVLELVRAAEAHPFRLERV 221 (258)
T ss_dssp TCEEEEEEESS-------CGG---------GGHHHHHHHEEEEEEEEEEESCH--HHHHHHHHHHTTTTEEEEEE
T ss_pred CCcCEEEECCc-------CHH---------HHHHHHHHhCCCCCEEEEEeCCH--HHHHHHHHHHHHCCCceEEE
Confidence 46999999743 111 22344567899999999866543 224455555543 2554443
No 167
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=92.90 E-value=0.034 Score=51.19 Aligned_cols=20 Identities=10% Similarity=-0.097 Sum_probs=16.6
Q ss_pred ceEEEeccCCChhHHHHHHh
Q psy15838 166 FTSIHLCEAPGAFITSLNHY 185 (399)
Q Consensus 166 ~~vlDLceaPGgFsqaln~y 185 (399)
.++||+|+|+|+.+..+...
T Consensus 72 ~~VLeiG~G~G~~~~~la~~ 91 (237)
T 3c3y_A 72 KKTIEVGVFTGYSLLLTALS 91 (237)
T ss_dssp CEEEEECCTTSHHHHHHHHH
T ss_pred CEEEEeCCCCCHHHHHHHHh
Confidence 39999999999998866554
No 168
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=92.89 E-value=0.23 Score=44.19 Aligned_cols=42 Identities=10% Similarity=0.024 Sum_probs=28.5
Q ss_pred CcccEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHH-hccCCCCEEEEeEccC
Q psy15838 269 SHCFLVTADGSFDCQGNPGEQEILVGKLHYREVQIAL-SLLHNGGNLVIKIFTI 321 (399)
Q Consensus 269 ~~vDLV~ADGs~d~sg~~~~qe~~s~~L~~~el~~Al-~~Lr~GG~fVlK~F~~ 321 (399)
..+|+|++-+...... +.+ ..+.-+. ++|+|||.+++=....
T Consensus 102 ~~fD~v~~~~~l~~~~--~~~---------~~l~~~~~~~LkpgG~l~i~~~~~ 144 (250)
T 2p7i_A 102 RRYDNIVLTHVLEHID--DPV---------ALLKRINDDWLAEGGRLFLVCPNA 144 (250)
T ss_dssp SCEEEEEEESCGGGCS--SHH---------HHHHHHHHTTEEEEEEEEEEEECT
T ss_pred CcccEEEEhhHHHhhc--CHH---------HHHHHHHHHhcCCCCEEEEEcCCh
Confidence 5699999988765432 221 2334456 8999999999977543
No 169
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=92.85 E-value=0.54 Score=41.96 Aligned_cols=36 Identities=14% Similarity=-0.021 Sum_probs=26.1
Q ss_pred CcccEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHhccCCCCEEEEeEccC
Q psy15838 269 SHCFLVTADGSFDCQGNPGEQEILVGKLHYREVQIALSLLHNGGNLVIKIFTI 321 (399)
Q Consensus 269 ~~vDLV~ADGs~d~sg~~~~qe~~s~~L~~~el~~Al~~Lr~GG~fVlK~F~~ 321 (399)
+++|+|++++....- + + -+..+|++||.+|+-+-..
T Consensus 133 ~~fD~v~~~~~~~~~--~--~-------------~~~~~L~pgG~l~~~~~~~ 168 (231)
T 1vbf_A 133 KPYDRVVVWATAPTL--L--C-------------KPYEQLKEGGIMILPIGVG 168 (231)
T ss_dssp CCEEEEEESSBBSSC--C--H-------------HHHHTEEEEEEEEEEECSS
T ss_pred CCccEEEECCcHHHH--H--H-------------HHHHHcCCCcEEEEEEcCC
Confidence 469999999876422 1 1 2567999999999986543
No 170
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=92.80 E-value=0.4 Score=46.79 Aligned_cols=42 Identities=7% Similarity=0.060 Sum_probs=29.0
Q ss_pred hhHHHHHHHHHHHHhCCCCCCCCCCceEEEeccCCChhHHHHHHh
Q psy15838 141 LATQAWCKFHEIVHSYNIVPQQENSFTSIHLCEAPGAFITSLNHY 185 (399)
Q Consensus 141 ~~trAw~KL~EId~~f~l~~~~~~~~~vlDLceaPGgFsqaln~y 185 (399)
+...+.....+|.+.++-++.. .++||+|||+|.++..+...
T Consensus 189 m~~~~~~~~~~l~~~~~~~~~~---~~vLDvG~G~G~~~~~l~~~ 230 (372)
T 1fp1_D 189 MVDVCATEMKRMLEIYTGFEGI---STLVDVGGGSGRNLELIISK 230 (372)
T ss_dssp HHHHHHHHHHHHHHHCCTTTTC---SEEEEETCTTSHHHHHHHHH
T ss_pred HHhhhHHHHHHHHHHhhccCCC---CEEEEeCCCCcHHHHHHHHH
Confidence 3334444556788888633332 49999999999999876553
No 171
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=92.74 E-value=0.91 Score=40.95 Aligned_cols=41 Identities=15% Similarity=0.091 Sum_probs=27.4
Q ss_pred CcccEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHhccCCCCEEEEeEccC
Q psy15838 269 SHCFLVTADGSFDCQGNPGEQEILVGKLHYREVQIALSLLHNGGNLVIKIFTI 321 (399)
Q Consensus 269 ~~vDLV~ADGs~d~sg~~~~qe~~s~~L~~~el~~Al~~Lr~GG~fVlK~F~~ 321 (399)
+.+|+|++........ +. ...+.-+..+|+|||.+++- +..
T Consensus 103 ~~fD~v~~~~~l~~~~--~~---------~~~l~~~~~~L~pgG~l~~~-~~~ 143 (263)
T 2yqz_A 103 ESVHGVIVVHLWHLVP--DW---------PKVLAEAIRVLKPGGALLEG-WDQ 143 (263)
T ss_dssp TCEEEEEEESCGGGCT--TH---------HHHHHHHHHHEEEEEEEEEE-EEE
T ss_pred CCeeEEEECCchhhcC--CH---------HHHHHHHHHHCCCCcEEEEE-ecC
Confidence 5699999977655332 11 12344466889999999987 443
No 172
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=92.73 E-value=0.18 Score=47.10 Aligned_cols=65 Identities=18% Similarity=0.158 Sum_probs=38.3
Q ss_pred CcccEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHhccCCCCEEEEeEccC---------CCCCHHHHHHHHHhcCCe
Q psy15838 269 SHCFLVTADGSFDCQGNPGEQEILVGKLHYREVQIALSLLHNGGNLVIKIFTI---------FESDTICLMYLLACLFTS 339 (399)
Q Consensus 269 ~~vDLV~ADGs~d~sg~~~~qe~~s~~L~~~el~~Al~~Lr~GG~fVlK~F~~---------~e~~t~~Ll~lL~~~F~~ 339 (399)
+.||+|++=++...-. ..+ ....+.-+.++|+|||.|++=.+.. +......+..++...|+-
T Consensus 151 ~~FD~V~~~~~l~~l~--~~~-------~~~~l~~~~~~LkpGG~l~l~~~~~~~~~~~g~~~~~~~~el~~~l~~~f~v 221 (252)
T 2gb4_A 151 GKFDRIWDRGALVAIN--PGD-------HDRYADIILSLLRKEFQYLVAVLSYDPTKHAGPPFYVPSAELKRLFGTKCSM 221 (252)
T ss_dssp CCEEEEEESSSTTTSC--GGG-------HHHHHHHHHHTEEEEEEEEEEEEECCTTSCCCSSCCCCHHHHHHHHTTTEEE
T ss_pred CCEEEEEEhhhhhhCC--HHH-------HHHHHHHHHHHcCCCeEEEEEEEecCCccCCCCCCCCCHHHHHHHhhCCeEE
Confidence 5799999877665432 111 1122344678999999997544321 111245677777766765
Q ss_pred eee
Q psy15838 340 VDL 342 (399)
Q Consensus 340 V~v 342 (399)
+.+
T Consensus 222 ~~~ 224 (252)
T 2gb4_A 222 QCL 224 (252)
T ss_dssp EEE
T ss_pred EEE
Confidence 444
No 173
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=92.71 E-value=0.47 Score=45.32 Aligned_cols=33 Identities=18% Similarity=0.249 Sum_probs=24.7
Q ss_pred CcccEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHhccCCCCEEEEeE
Q psy15838 269 SHCFLVTADGSFDCQGNPGEQEILVGKLHYREVQIALSLLHNGGNLVIKI 318 (399)
Q Consensus 269 ~~vDLV~ADGs~d~sg~~~~qe~~s~~L~~~el~~Al~~Lr~GG~fVlK~ 318 (399)
+++|+|++++...-.+ ..+...|+|||.+|+=+
T Consensus 143 ~~fD~Iv~~~~~~~~~-----------------~~~~~~LkpgG~lvi~~ 175 (317)
T 1dl5_A 143 SPYDVIFVTVGVDEVP-----------------ETWFTQLKEGGRVIVPI 175 (317)
T ss_dssp CCEEEEEECSBBSCCC-----------------HHHHHHEEEEEEEEEEB
T ss_pred CCeEEEEEcCCHHHHH-----------------HHHHHhcCCCcEEEEEE
Confidence 4699999998875332 12456899999999864
No 174
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=92.70 E-value=0.037 Score=51.45 Aligned_cols=20 Identities=5% Similarity=-0.049 Sum_probs=16.5
Q ss_pred ceEEEeccCCChhHHHHHHh
Q psy15838 166 FTSIHLCEAPGAFITSLNHY 185 (399)
Q Consensus 166 ~~vlDLceaPGgFsqaln~y 185 (399)
.++||+|+|.|.++..+...
T Consensus 81 ~~VLeiG~G~G~~~~~la~~ 100 (247)
T 1sui_A 81 KNTMEIGVYTGYSLLATALA 100 (247)
T ss_dssp CEEEEECCGGGHHHHHHHHH
T ss_pred CEEEEeCCCcCHHHHHHHHh
Confidence 39999999999988866554
No 175
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=92.55 E-value=0.11 Score=51.42 Aligned_cols=52 Identities=13% Similarity=0.035 Sum_probs=29.7
Q ss_pred CcccEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHhccCCCCEEEEeEccCC
Q psy15838 269 SHCFLVTADGSFDCQGNPGEQEILVGKLHYREVQIALSLLHNGGNLVIKIFTIF 322 (399)
Q Consensus 269 ~~vDLV~ADGs~d~sg~~~~qe~~s~~L~~~el~~Al~~Lr~GG~fVlK~F~~~ 322 (399)
..+|+|++|--.-........+. .......+..++.+|++||.+++-.....
T Consensus 292 ~~fD~Ii~dpP~~~~~~~~~~~~--~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 343 (396)
T 3c0k_A 292 EKFDVIVMDPPKFVENKSQLMGA--CRGYKDINMLAIQLLNEGGILLTFSCSGL 343 (396)
T ss_dssp CCEEEEEECCSSTTTCSSSSSCC--CTHHHHHHHHHHHTEEEEEEEEEEECCTT
T ss_pred CCCCEEEECCCCCCCChhHHHHH--HHHHHHHHHHHHHhcCCCcEEEEEeCCCc
Confidence 46999999953211111010000 01233445568889999999998776653
No 176
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=92.47 E-value=0.47 Score=43.09 Aligned_cols=35 Identities=31% Similarity=0.364 Sum_probs=24.6
Q ss_pred CcccEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHhccCCCCEEEEe
Q psy15838 269 SHCFLVTADGSFDCQGNPGEQEILVGKLHYREVQIALSLLHNGGNLVIK 317 (399)
Q Consensus 269 ~~vDLV~ADGs~d~sg~~~~qe~~s~~L~~~el~~Al~~Lr~GG~fVlK 317 (399)
+.+|+|++|+... +. ...+..+..+|++||.+|+-
T Consensus 147 ~~fD~V~~d~~~~-----~~---------~~~l~~~~~~LkpgG~lv~~ 181 (232)
T 3cbg_A 147 PEFDLIFIDADKR-----NY---------PRYYEIGLNLLRRGGLMVID 181 (232)
T ss_dssp CCEEEEEECSCGG-----GH---------HHHHHHHHHTEEEEEEEEEE
T ss_pred CCcCEEEECCCHH-----HH---------HHHHHHHHHHcCCCeEEEEe
Confidence 5799999997521 11 12344567899999999984
No 177
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=92.46 E-value=1.4 Score=39.66 Aligned_cols=69 Identities=13% Similarity=-0.056 Sum_probs=39.5
Q ss_pred CcccEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHhccCCCCEEEEeEccC-------------CCCCHHHHHHHHHh
Q psy15838 269 SHCFLVTADGSFDCQGNPGEQEILVGKLHYREVQIALSLLHNGGNLVIKIFTI-------------FESDTICLMYLLAC 335 (399)
Q Consensus 269 ~~vDLV~ADGs~d~sg~~~~qe~~s~~L~~~el~~Al~~Lr~GG~fVlK~F~~-------------~e~~t~~Ll~lL~~ 335 (399)
+.+|+|++-.....-.. .. .-....+.-+.++|+|||.||+-.... .......+..+|..
T Consensus 156 ~~fD~v~~~~~l~~~~~-~~------~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 228 (265)
T 2i62_A 156 PPADCLLSTLCLDAACP-DL------PAYRTALRNLGSLLKPGGFLVMVDALKSSYYMIGEQKFSSLPLGWETVRDAVEE 228 (265)
T ss_dssp CCEEEEEEESCHHHHCS-SH------HHHHHHHHHHHTTEEEEEEEEEEEESSCCEEEETTEEEECCCCCHHHHHHHHHH
T ss_pred CCccEEEEhhhhhhhcC-Ch------HHHHHHHHHHHhhCCCCcEEEEEecCCCceEEcCCccccccccCHHHHHHHHHH
Confidence 57999998665431100 00 112334455678999999999865321 11123466777765
Q ss_pred c-CCeeeeec
Q psy15838 336 L-FTSVDLFK 344 (399)
Q Consensus 336 ~-F~~V~v~K 344 (399)
. |+-+.+..
T Consensus 229 aGf~~~~~~~ 238 (265)
T 2i62_A 229 AGYTIEQFEV 238 (265)
T ss_dssp TTCEEEEEEE
T ss_pred CCCEEEEEEE
Confidence 4 87666553
No 178
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=92.40 E-value=0.28 Score=49.05 Aligned_cols=72 Identities=14% Similarity=0.140 Sum_probs=43.3
Q ss_pred CcccEEEecCCC-CCCCCCchhHHHHHHHHHHHHHHHHhccCCCCEEEEeEccCCCCCHHHHHHH-HHhcCCeeee
Q psy15838 269 SHCFLVTADGSF-DCQGNPGEQEILVGKLHYREVQIALSLLHNGGNLVIKIFTIFESDTICLMYL-LACLFTSVDL 342 (399)
Q Consensus 269 ~~vDLV~ADGs~-d~sg~~~~qe~~s~~L~~~el~~Al~~Lr~GG~fVlK~F~~~e~~t~~Ll~l-L~~~F~~V~v 342 (399)
.++|+|+.|..- .....+. +..+.......+..+...|++||.+|+=.=.........++.. |+.+|..|..
T Consensus 266 ~~fDvII~D~~d~P~~~~p~--~L~t~eFy~~~~~~~~~~L~pgGilv~qs~s~~~~e~~~~~~~~l~~~F~~v~~ 339 (364)
T 2qfm_A 266 REFDYVINDLTAVPISTSPE--EDSTWEFLRLILDLSMKVLKQDGKYFTQGNCVNLTEALSLYEEQLGRLYCPVEF 339 (364)
T ss_dssp CCEEEEEEECCSSCCCCC------CHHHHHHHHHHHHHHTEEEEEEEEEEEEETTCHHHHHHHHHHHTTSSSCEEE
T ss_pred CCceEEEECCCCcccCcCch--hhhHHHHHHHHHHHHHhhCCCCcEEEEEcCCcchHHHHHHHHHHHHHhCCceEE
Confidence 579999999854 2222222 1122233333345568899999999987544433223445553 8889999986
No 179
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=92.32 E-value=0.12 Score=46.88 Aligned_cols=43 Identities=19% Similarity=-0.019 Sum_probs=25.7
Q ss_pred CcccEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHhccCCCCEEEEe
Q psy15838 269 SHCFLVTADGSFDCQGNPGEQEILVGKLHYREVQIALSLLHNGGNLVIK 317 (399)
Q Consensus 269 ~~vDLV~ADGs~d~sg~~~~qe~~s~~L~~~el~~Al~~Lr~GG~fVlK 317 (399)
+.+|+|++|..... .+... .......+.-+.++|+|||.|++=
T Consensus 127 ~~fD~V~~d~~~~~--~~~~~----~~~~~~~l~~~~r~LkpgG~l~~~ 169 (236)
T 1zx0_A 127 GHFDGILYDTYPLS--EETWH----THQFNFIKNHAFRLLKPGGVLTYC 169 (236)
T ss_dssp TCEEEEEECCCCCB--GGGTT----THHHHHHHHTHHHHEEEEEEEEEC
T ss_pred CceEEEEECCcccc--hhhhh----hhhHHHHHHHHHHhcCCCeEEEEE
Confidence 57999999843321 11111 112223455577899999999863
No 180
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=92.10 E-value=0.14 Score=49.89 Aligned_cols=47 Identities=17% Similarity=0.101 Sum_probs=30.6
Q ss_pred CcccEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHhccCCCCEEEEeE
Q psy15838 269 SHCFLVTADGSFDCQGNPGEQEILVGKLHYREVQIALSLLHNGGNLVIKI 318 (399)
Q Consensus 269 ~~vDLV~ADGs~d~sg~~~~qe~~s~~L~~~el~~Al~~Lr~GG~fVlK~ 318 (399)
..+|+|++|.-... ...+......+....+..+..+|++||.+++=+
T Consensus 271 ~~~D~Ii~npPyg~---r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t 317 (354)
T 3tma_A 271 PEVDRILANPPHGL---RLGRKEGLFHLYWDFLRGALALLPPGGRVALLT 317 (354)
T ss_dssp CCCSEEEECCCSCC-------CHHHHHHHHHHHHHHHHTSCTTCEEEEEE
T ss_pred CCCCEEEECCCCcC---ccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 34899999975432 111112234566667777889999999999853
No 181
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=91.93 E-value=0.77 Score=41.47 Aligned_cols=43 Identities=9% Similarity=0.033 Sum_probs=29.3
Q ss_pred CcccEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHhccCCCCEEEEeEccCC
Q psy15838 269 SHCFLVTADGSFDCQGNPGEQEILVGKLHYREVQIALSLLHNGGNLVIKIFTIF 322 (399)
Q Consensus 269 ~~vDLV~ADGs~d~sg~~~~qe~~s~~L~~~el~~Al~~Lr~GG~fVlK~F~~~ 322 (399)
+.+|+|++......-. +. ...+.-+..+|+|||.+++-.+...
T Consensus 86 ~~fD~v~~~~~l~~~~--~~---------~~~l~~~~~~LkpgG~l~~~~~~~~ 128 (239)
T 1xxl_A 86 DSFDIITCRYAAHHFS--DV---------RKAVREVARVLKQDGRFLLVDHYAP 128 (239)
T ss_dssp TCEEEEEEESCGGGCS--CH---------HHHHHHHHHHEEEEEEEEEEEECBC
T ss_pred CcEEEEEECCchhhcc--CH---------HHHHHHHHHHcCCCcEEEEEEcCCC
Confidence 5799999987654322 21 1234556689999999999766553
No 182
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=91.93 E-value=1.1 Score=39.67 Aligned_cols=45 Identities=16% Similarity=0.010 Sum_probs=27.2
Q ss_pred CcccEEEecC-CCCCCCCCchhHHHHHHHHHHHHHHHHhccCCCCEEEEeEccC
Q psy15838 269 SHCFLVTADG-SFDCQGNPGEQEILVGKLHYREVQIALSLLHNGGNLVIKIFTI 321 (399)
Q Consensus 269 ~~vDLV~ADG-s~d~sg~~~~qe~~s~~L~~~el~~Al~~Lr~GG~fVlK~F~~ 321 (399)
..+|+|+|-. ....-. +.+ -....+.-+..+|+|||.+|+-.+..
T Consensus 99 ~~~D~v~~~~~~~~~~~--~~~------~~~~~l~~~~~~L~pgG~l~~~~~~~ 144 (239)
T 3bxo_A 99 RKFSAVVSMFSSVGYLK--TTE------ELGAAVASFAEHLEPGGVVVVEPWWF 144 (239)
T ss_dssp SCEEEEEECTTGGGGCC--SHH------HHHHHHHHHHHTEEEEEEEEECCCCC
T ss_pred CCCcEEEEcCchHhhcC--CHH------HHHHHHHHHHHhcCCCeEEEEEeccC
Confidence 4699999533 333221 111 12234455678999999999976554
No 183
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=91.92 E-value=2 Score=39.73 Aligned_cols=79 Identities=14% Similarity=-0.018 Sum_probs=40.3
Q ss_pred CcccEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHhccCCCCEEEE-eEccCCCCCHHHHHHHHHhc-CCeeeeecCC
Q psy15838 269 SHCFLVTADGSFDCQGNPGEQEILVGKLHYREVQIALSLLHNGGNLVI-KIFTIFESDTICLMYLLACL-FTSVDLFKPA 346 (399)
Q Consensus 269 ~~vDLV~ADGs~d~sg~~~~qe~~s~~L~~~el~~Al~~Lr~GG~fVl-K~F~~~e~~t~~Ll~lL~~~-F~~V~v~KP~ 346 (399)
..||+|+|.+..+ . ...+..+..+|++||.||+ |--.. ......+...+..+ |+-+. ..+.
T Consensus 150 ~~fD~I~s~a~~~------~---------~~ll~~~~~~LkpgG~l~~~~g~~~-~~e~~~~~~~l~~~G~~~~~-~~~~ 212 (249)
T 3g89_A 150 EAYARAVARAVAP------L---------CVLSELLLPFLEVGGAAVAMKGPRV-EEELAPLPPALERLGGRLGE-VLAL 212 (249)
T ss_dssp TCEEEEEEESSCC------H---------HHHHHHHGGGEEEEEEEEEEECSCC-HHHHTTHHHHHHHHTEEEEE-EEEE
T ss_pred CCceEEEECCcCC------H---------HHHHHHHHHHcCCCeEEEEEeCCCc-HHHHHHHHHHHHHcCCeEEE-EEEe
Confidence 5799999975422 1 1234457789999999885 42111 11122233333332 33222 2222
Q ss_pred CCCCCCceEEEEEeeccC
Q psy15838 347 TSKEGNSEIYVICRDFHS 364 (399)
Q Consensus 347 aSR~~sSE~YlVc~gf~g 364 (399)
..-....++++|......
T Consensus 213 ~~p~~~~~R~l~~~~k~~ 230 (249)
T 3g89_A 213 QLPLSGEARHLVVLEKTA 230 (249)
T ss_dssp ECTTTCCEEEEEEEEECS
T ss_pred eCCCCCCcEEEEEEEeCC
Confidence 222234577777766543
No 184
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=91.87 E-value=0.78 Score=40.38 Aligned_cols=35 Identities=11% Similarity=0.089 Sum_probs=25.7
Q ss_pred CcccEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHhccCCCCEEEEeEcc
Q psy15838 269 SHCFLVTADGSFDCQGNPGEQEILVGKLHYREVQIALSLLHNGGNLVIKIFT 320 (399)
Q Consensus 269 ~~vDLV~ADGs~d~sg~~~~qe~~s~~L~~~el~~Al~~Lr~GG~fVlK~F~ 320 (399)
.++|+|++++...... ..+..+|++||.+|+=+-.
T Consensus 145 ~~fD~v~~~~~~~~~~-----------------~~~~~~L~pgG~lv~~~~~ 179 (215)
T 2yxe_A 145 APYDRIYTTAAGPKIP-----------------EPLIRQLKDGGKLLMPVGR 179 (215)
T ss_dssp CCEEEEEESSBBSSCC-----------------HHHHHTEEEEEEEEEEESS
T ss_pred CCeeEEEECCchHHHH-----------------HHHHHHcCCCcEEEEEECC
Confidence 4699999998765221 1457799999999986543
No 185
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=91.79 E-value=0.73 Score=42.30 Aligned_cols=40 Identities=13% Similarity=0.089 Sum_probs=27.4
Q ss_pred CcccEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHhccCCCCEEEEeEcc
Q psy15838 269 SHCFLVTADGSFDCQGNPGEQEILVGKLHYREVQIALSLLHNGGNLVIKIFT 320 (399)
Q Consensus 269 ~~vDLV~ADGs~d~sg~~~~qe~~s~~L~~~el~~Al~~Lr~GG~fVlK~F~ 320 (399)
+.+|+|++-+....- ++.. ..+.-+..+|+ ||.+++=.+.
T Consensus 93 ~~fD~v~~~~~l~~~--~~~~---------~~l~~~~~~Lk-gG~~~~~~~~ 132 (261)
T 3ege_A 93 KSVDGVISILAIHHF--SHLE---------KSFQEMQRIIR-DGTIVLLTFD 132 (261)
T ss_dssp TCBSEEEEESCGGGC--SSHH---------HHHHHHHHHBC-SSCEEEEEEC
T ss_pred CCEeEEEEcchHhhc--cCHH---------HHHHHHHHHhC-CcEEEEEEcC
Confidence 579999998876433 2222 23445667999 9988887765
No 186
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=91.75 E-value=0.39 Score=46.42 Aligned_cols=32 Identities=9% Similarity=0.092 Sum_probs=24.1
Q ss_pred HHHHHHhCCCCCCCCCCceEEEeccCCChhHHHHHH
Q psy15838 149 FHEIVHSYNIVPQQENSFTSIHLCEAPGAFITSLNH 184 (399)
Q Consensus 149 L~EId~~f~l~~~~~~~~~vlDLceaPGgFsqaln~ 184 (399)
..+|.+.+++-+. .++||+|||+|.++..+..
T Consensus 173 ~~~~~~~~~~~~~----~~vLDvG~G~G~~~~~l~~ 204 (348)
T 3lst_A 173 HLILARAGDFPAT----GTVADVGGGRGGFLLTVLR 204 (348)
T ss_dssp HHHHHHHSCCCSS----EEEEEETCTTSHHHHHHHH
T ss_pred HHHHHHhCCccCC----ceEEEECCccCHHHHHHHH
Confidence 4467777765332 5999999999999987654
No 187
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=91.70 E-value=2 Score=39.15 Aligned_cols=35 Identities=6% Similarity=-0.099 Sum_probs=25.9
Q ss_pred CcccEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHhccCCCCEEEEeEccC
Q psy15838 269 SHCFLVTADGSFDCQGNPGEQEILVGKLHYREVQIALSLLHNGGNLVIKIFTI 321 (399)
Q Consensus 269 ~~vDLV~ADGs~d~sg~~~~qe~~s~~L~~~el~~Al~~Lr~GG~fVlK~F~~ 321 (399)
+.+|+|++-+.+. .+.-+..+|+|||.+|+-....
T Consensus 147 ~~fD~v~~~~~~~------------------~l~~~~~~L~pgG~l~~~~~~~ 181 (269)
T 1p91_A 147 TSMDAIIRIYAPC------------------KAEELARVVKPGGWVITATPGP 181 (269)
T ss_dssp TCEEEEEEESCCC------------------CHHHHHHHEEEEEEEEEEEECT
T ss_pred CceeEEEEeCChh------------------hHHHHHHhcCCCcEEEEEEcCH
Confidence 4799999854421 1344677999999999988765
No 188
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=91.67 E-value=0.22 Score=48.52 Aligned_cols=40 Identities=13% Similarity=-0.009 Sum_probs=25.5
Q ss_pred CcccEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHhccCCCCEEEEe
Q psy15838 269 SHCFLVTADGSFDCQGNPGEQEILVGKLHYREVQIALSLLHNGGNLVIK 317 (399)
Q Consensus 269 ~~vDLV~ADGs~d~sg~~~~qe~~s~~L~~~el~~Al~~Lr~GG~fVlK 317 (399)
.++|+|++++....-..+.. ...+.-+.++|++||.+|+=
T Consensus 115 ~~~D~Ivs~~~~~~~~~~~~---------~~~l~~~~~~LkpgG~li~~ 154 (348)
T 2y1w_A 115 EQVDIIISEPMGYMLFNERM---------LESYLHAKKYLKPSGNMFPT 154 (348)
T ss_dssp SCEEEEEECCCBTTBTTTSH---------HHHHHHGGGGEEEEEEEESC
T ss_pred CceeEEEEeCchhcCChHHH---------HHHHHHHHhhcCCCeEEEEe
Confidence 46999999976443322221 11223466899999999854
No 189
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=91.51 E-value=0.052 Score=49.49 Aligned_cols=36 Identities=25% Similarity=0.197 Sum_probs=25.1
Q ss_pred CcccEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHhccCCCCEEEEeE
Q psy15838 269 SHCFLVTADGSFDCQGNPGEQEILVGKLHYREVQIALSLLHNGGNLVIKI 318 (399)
Q Consensus 269 ~~vDLV~ADGs~d~sg~~~~qe~~s~~L~~~el~~Al~~Lr~GG~fVlK~ 318 (399)
+++|+|++|+... .. ...+..+..+|++||.+|+-.
T Consensus 146 ~~fD~I~~~~~~~-----~~---------~~~l~~~~~~L~pgG~lv~~~ 181 (239)
T 2hnk_A 146 SSIDLFFLDADKE-----NY---------PNYYPLILKLLKPGGLLIADN 181 (239)
T ss_dssp TCEEEEEECSCGG-----GH---------HHHHHHHHHHEEEEEEEEEEC
T ss_pred CCcCEEEEeCCHH-----HH---------HHHHHHHHHHcCCCeEEEEEc
Confidence 5799999996421 11 123555678999999999853
No 190
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=91.48 E-value=0.46 Score=45.98 Aligned_cols=65 Identities=14% Similarity=0.100 Sum_probs=41.1
Q ss_pred CcccEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHhccCCCCEEEEeEccCCCCCHHHHHHHHHhcCCeeeeec
Q psy15838 269 SHCFLVTADGSFDCQGNPGEQEILVGKLHYREVQIALSLLHNGGNLVIKIFTIFESDTICLMYLLACLFTSVDLFK 344 (399)
Q Consensus 269 ~~vDLV~ADGs~d~sg~~~~qe~~s~~L~~~el~~Al~~Lr~GG~fVlK~F~~~e~~t~~Ll~lL~~~F~~V~v~K 344 (399)
+.+|+|+++..+... .. .........+.-+..+|+|||.+++=...... .-..+...|..+....
T Consensus 260 ~~fD~Iv~~~~~~~g-~~-----~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~-----~~~~l~~~f~~~~~~~ 324 (343)
T 2pjd_A 260 GRFDMIISNPPFHDG-MQ-----TSLDAAQTLIRGAVRHLNSGGELRIVANAFLP-----YPDVLDETFGFHEVIA 324 (343)
T ss_dssp SCEEEEEECCCCCSS-SH-----HHHHHHHHHHHHHGGGEEEEEEEEEEEETTSS-----HHHHHHHHHSCCEEEE
T ss_pred CCeeEEEECCCcccC-cc-----CCHHHHHHHHHHHHHhCCCCcEEEEEEcCCCC-----cHHHHHHhcCceEEEe
Confidence 469999998765432 11 11223445567788999999999996655422 2345666677666543
No 191
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=91.22 E-value=0.69 Score=41.22 Aligned_cols=41 Identities=15% Similarity=0.104 Sum_probs=27.5
Q ss_pred CcccEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHhccCCCCEEEEeEcc
Q psy15838 269 SHCFLVTADGSFDCQGNPGEQEILVGKLHYREVQIALSLLHNGGNLVIKIFT 320 (399)
Q Consensus 269 ~~vDLV~ADGs~d~sg~~~~qe~~s~~L~~~el~~Al~~Lr~GG~fVlK~F~ 320 (399)
+.+|+|++....... ++.. ..+.-+..+|+|||.+|+-+..
T Consensus 106 ~~fD~v~~~~~l~~~--~~~~---------~~l~~~~~~L~pgG~l~~~~~~ 146 (243)
T 3bkw_A 106 DSFDLAYSSLALHYV--EDVA---------RLFRTVHQALSPGGHFVFSTEH 146 (243)
T ss_dssp TCEEEEEEESCGGGC--SCHH---------HHHHHHHHHEEEEEEEEEEEEC
T ss_pred CCceEEEEecccccc--chHH---------HHHHHHHHhcCcCcEEEEEeCC
Confidence 579999998765432 1211 2344456789999999997643
No 192
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=91.15 E-value=0.93 Score=40.24 Aligned_cols=42 Identities=17% Similarity=0.185 Sum_probs=28.5
Q ss_pred CcccEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHhccCCCCEEEEeEccC
Q psy15838 269 SHCFLVTADGSFDCQGNPGEQEILVGKLHYREVQIALSLLHNGGNLVIKIFTI 321 (399)
Q Consensus 269 ~~vDLV~ADGs~d~sg~~~~qe~~s~~L~~~el~~Al~~Lr~GG~fVlK~F~~ 321 (399)
+.+|+|++.+...... +. ...+.-+..+|++||.+|+-.+..
T Consensus 101 ~~fD~v~~~~~l~~~~--~~---------~~~l~~~~~~L~pgG~l~i~~~~~ 142 (219)
T 1vlm_A 101 ESFDFALMVTTICFVD--DP---------ERALKEAYRILKKGGYLIVGIVDR 142 (219)
T ss_dssp TCEEEEEEESCGGGSS--CH---------HHHHHHHHHHEEEEEEEEEEEECS
T ss_pred CCeeEEEEcchHhhcc--CH---------HHHHHHHHHHcCCCcEEEEEEeCC
Confidence 4699999987654331 22 123444567899999999976653
No 193
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=91.01 E-value=0.17 Score=49.30 Aligned_cols=19 Identities=5% Similarity=-0.032 Sum_probs=15.7
Q ss_pred ceEEEeccCCChhHHHHHH
Q psy15838 166 FTSIHLCEAPGAFITSLNH 184 (399)
Q Consensus 166 ~~vlDLceaPGgFsqaln~ 184 (399)
.+|||||||.|.++..+..
T Consensus 66 ~~VLDiGcGtG~ls~~la~ 84 (340)
T 2fyt_A 66 KVVLDVGCGTGILSMFAAK 84 (340)
T ss_dssp CEEEEETCTTSHHHHHHHH
T ss_pred CEEEEeeccCcHHHHHHHH
Confidence 3999999999998875544
No 194
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=90.89 E-value=0.85 Score=42.19 Aligned_cols=48 Identities=27% Similarity=0.270 Sum_probs=27.5
Q ss_pred CCcccEEEecC-CCCCCCC-CchhHHHHHHHHHHHHHHHHhccCCCCEEEEeEcc
Q psy15838 268 ASHCFLVTADG-SFDCQGN-PGEQEILVGKLHYREVQIALSLLHNGGNLVIKIFT 320 (399)
Q Consensus 268 ~~~vDLV~ADG-s~d~sg~-~~~qe~~s~~L~~~el~~Al~~Lr~GG~fVlK~F~ 320 (399)
.+.+|+|++-| +...-.+ ....+ .....+.-+..+|+|||.||+=+..
T Consensus 128 ~~~fD~V~~~g~~l~~~~~~~~~~~-----~~~~~l~~~~~~LkpgG~l~~~~~~ 177 (293)
T 3thr_A 128 GDGFDAVICLGNSFAHLPDSKGDQS-----EHRLALKNIASMVRPGGLLVIDHRN 177 (293)
T ss_dssp TTCEEEEEECTTCGGGSCCSSSSSH-----HHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred CCCeEEEEEcChHHhhcCccccCHH-----HHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 35799999974 3321111 00011 1223445567899999999986543
No 195
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=90.75 E-value=0.071 Score=47.59 Aligned_cols=16 Identities=13% Similarity=0.129 Sum_probs=14.2
Q ss_pred eEEEeccCCChhHHHH
Q psy15838 167 TSIHLCEAPGAFITSL 182 (399)
Q Consensus 167 ~vlDLceaPGgFsqal 182 (399)
++||||||+|.++..+
T Consensus 57 ~vLDlgcG~G~~~~~l 72 (202)
T 2fpo_A 57 QCLDCFAGSGALGLEA 72 (202)
T ss_dssp EEEETTCTTCHHHHHH
T ss_pred eEEEeCCCcCHHHHHH
Confidence 8999999999998753
No 196
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=90.58 E-value=1.1 Score=42.14 Aligned_cols=46 Identities=9% Similarity=-0.112 Sum_probs=29.2
Q ss_pred CcccEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHhccCCCCEEEEeEccC
Q psy15838 269 SHCFLVTADGSFDCQGNPGEQEILVGKLHYREVQIALSLLHNGGNLVIKIFTI 321 (399)
Q Consensus 269 ~~vDLV~ADGs~d~sg~~~~qe~~s~~L~~~el~~Al~~Lr~GG~fVlK~F~~ 321 (399)
+.+|+|++-.+....- .+. .-....+.-+..+|+|||.||+-++..
T Consensus 113 ~~fD~V~~~~~l~~~~-~~~------~~~~~~l~~~~~~LkpgG~li~~~~~~ 158 (313)
T 3bgv_A 113 MCFDICSCQFVCHYSF-ESY------EQADMMLRNACERLSPGGYFIGTTPNS 158 (313)
T ss_dssp CCEEEEEEETCGGGGG-GSH------HHHHHHHHHHHTTEEEEEEEEEEEECH
T ss_pred CCEEEEEEecchhhcc-CCH------HHHHHHHHHHHHHhCCCcEEEEecCCh
Confidence 4799999977653210 011 112234455678999999999877665
No 197
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=90.54 E-value=0.43 Score=47.53 Aligned_cols=64 Identities=16% Similarity=0.158 Sum_probs=42.8
Q ss_pred CcccEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHhccCCCCEEEEeEccCCCCCHHHHHHHHHhcCCeeeee
Q psy15838 269 SHCFLVTADGSFDCQGNPGEQEILVGKLHYREVQIALSLLHNGGNLVIKIFTIFESDTICLMYLLACLFTSVDLF 343 (399)
Q Consensus 269 ~~vDLV~ADGs~d~sg~~~~qe~~s~~L~~~el~~Al~~Lr~GG~fVlK~F~~~e~~t~~Ll~lL~~~F~~V~v~ 343 (399)
..+|+|+++..+...+.... ......+.-+..+|++||.+++-.-... ..-..+...|..+..+
T Consensus 297 ~~fD~Ii~npp~~~~~~~~~------~~~~~~l~~~~~~LkpGG~l~iv~n~~l-----~~~~~l~~~f~~v~~l 360 (381)
T 3dmg_A 297 ARFDIIVTNPPFHVGGAVIL------DVAQAFVNVAAARLRPGGVFFLVSNPFL-----KYEPLLEEKFGAFQTL 360 (381)
T ss_dssp CCEEEEEECCCCCTTCSSCC------HHHHHHHHHHHHHEEEEEEEEEEECTTS-----CHHHHHHHHHSCCEEE
T ss_pred CCeEEEEECCchhhcccccH------HHHHHHHHHHHHhcCcCcEEEEEEcCCC-----ChHHHHHHhhccEEEE
Confidence 57999999977654332221 1223445567789999999999765442 3445677778888776
No 198
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=90.31 E-value=0.56 Score=42.38 Aligned_cols=36 Identities=17% Similarity=0.229 Sum_probs=25.9
Q ss_pred CcccEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHhccCCCCEEEEeEccC
Q psy15838 269 SHCFLVTADGSFDCQGNPGEQEILVGKLHYREVQIALSLLHNGGNLVIKIFTI 321 (399)
Q Consensus 269 ~~vDLV~ADGs~d~sg~~~~qe~~s~~L~~~el~~Al~~Lr~GG~fVlK~F~~ 321 (399)
.++|+|++++...-. + + .+...|++||.+|+=+-..
T Consensus 157 ~~fD~Ii~~~~~~~~--~--~-------------~~~~~L~pgG~lvi~~~~~ 192 (235)
T 1jg1_A 157 APYDVIIVTAGAPKI--P--E-------------PLIEQLKIGGKLIIPVGSY 192 (235)
T ss_dssp CCEEEEEECSBBSSC--C--H-------------HHHHTEEEEEEEEEEECSS
T ss_pred CCccEEEECCcHHHH--H--H-------------HHHHhcCCCcEEEEEEecC
Confidence 359999999876421 1 1 2467999999999977654
No 199
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=90.29 E-value=0.059 Score=47.92 Aligned_cols=19 Identities=5% Similarity=-0.150 Sum_probs=15.8
Q ss_pred ceEEEeccCCChhHHHHHH
Q psy15838 166 FTSIHLCEAPGAFITSLNH 184 (399)
Q Consensus 166 ~~vlDLceaPGgFsqaln~ 184 (399)
.++||+|||+|.++..+..
T Consensus 58 ~~vLdiG~G~G~~~~~la~ 76 (210)
T 3c3p_A 58 QLVVVPGDGLGCASWWFAR 76 (210)
T ss_dssp SEEEEESCGGGHHHHHHHT
T ss_pred CEEEEEcCCccHHHHHHHH
Confidence 3999999999998886544
No 200
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=90.27 E-value=0.048 Score=50.09 Aligned_cols=43 Identities=19% Similarity=0.003 Sum_probs=26.9
Q ss_pred CCcccEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHhccCCCCEEEE
Q psy15838 268 ASHCFLVTADGSFDCQGNPGEQEILVGKLHYREVQIALSLLHNGGNLVI 316 (399)
Q Consensus 268 ~~~vDLV~ADGs~d~sg~~~~qe~~s~~L~~~el~~Al~~Lr~GG~fVl 316 (399)
...||.|..|..+......... -....+.-+.++|||||.|+.
T Consensus 126 ~~~FD~i~~D~~~~~~~~~~~~------~~~~~~~e~~rvLkPGG~l~f 168 (236)
T 3orh_A 126 DGHFDGILYDTYPLSEETWHTH------QFNFIKNHAFRLLKPGGVLTY 168 (236)
T ss_dssp TTCEEEEEECCCCCBGGGTTTH------HHHHHHHTHHHHEEEEEEEEE
T ss_pred ccCCceEEEeeeecccchhhhc------chhhhhhhhhheeCCCCEEEE
Confidence 4579999999876543222111 112233446789999999974
No 201
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=90.18 E-value=1.8 Score=42.32 Aligned_cols=34 Identities=18% Similarity=0.215 Sum_probs=24.0
Q ss_pred HHHHHHHhCCCCCCCCCCceEEEeccCCChhHHHHHH
Q psy15838 148 KFHEIVHSYNIVPQQENSFTSIHLCEAPGAFITSLNH 184 (399)
Q Consensus 148 KL~EId~~f~l~~~~~~~~~vlDLceaPGgFsqaln~ 184 (399)
-..+|.+.++-+.. ..++||+|||+|.++..+..
T Consensus 190 ~~~~~~~~~~~~~~---~~~vlDvG~G~G~~~~~l~~ 223 (368)
T 3reo_A 190 TMKKILEMYNGFEG---LTTIVDVGGGTGAVASMIVA 223 (368)
T ss_dssp HHHHHHTTCCTTTT---CSEEEEETCTTSHHHHHHHH
T ss_pred HHHHHHHhcccccC---CCEEEEeCCCcCHHHHHHHH
Confidence 34566776652332 24999999999999987654
No 202
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=90.15 E-value=0.75 Score=44.80 Aligned_cols=19 Identities=5% Similarity=0.036 Sum_probs=16.0
Q ss_pred ceEEEeccCCChhHHHHHH
Q psy15838 166 FTSIHLCEAPGAFITSLNH 184 (399)
Q Consensus 166 ~~vlDLceaPGgFsqaln~ 184 (399)
.+|||||||+|.++..+..
T Consensus 68 ~~VLDvGcG~G~~~~~la~ 86 (349)
T 3q7e_A 68 KVVLDVGSGTGILCMFAAK 86 (349)
T ss_dssp CEEEEESCTTSHHHHHHHH
T ss_pred CEEEEEeccchHHHHHHHH
Confidence 3999999999999886544
No 203
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=90.14 E-value=0.39 Score=47.39 Aligned_cols=41 Identities=5% Similarity=-0.155 Sum_probs=25.4
Q ss_pred CcccEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHhccCCCCEEEEe
Q psy15838 269 SHCFLVTADGSFDCQGNPGEQEILVGKLHYREVQIALSLLHNGGNLVIK 317 (399)
Q Consensus 269 ~~vDLV~ADGs~d~sg~~~~qe~~s~~L~~~el~~Al~~Lr~GG~fVlK 317 (399)
+++|+|+++....+...... ....+..+.++|+|||.+|+=
T Consensus 128 ~~~D~Iv~~~~~~~l~~e~~--------~~~~l~~~~~~LkpgG~li~~ 168 (376)
T 3r0q_C 128 EKVDVIISEWMGYFLLRESM--------FDSVISARDRWLKPTGVMYPS 168 (376)
T ss_dssp SCEEEEEECCCBTTBTTTCT--------HHHHHHHHHHHEEEEEEEESS
T ss_pred CcceEEEEcChhhcccchHH--------HHHHHHHHHhhCCCCeEEEEe
Confidence 57999999875444322111 122233345899999999763
No 204
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=90.10 E-value=0.29 Score=43.76 Aligned_cols=43 Identities=21% Similarity=0.200 Sum_probs=26.2
Q ss_pred CcccEEEecC-CCCCCCCCchhHHHHHHHHHHHHHHHHhccCCCCEEEEeEc
Q psy15838 269 SHCFLVTADG-SFDCQGNPGEQEILVGKLHYREVQIALSLLHNGGNLVIKIF 319 (399)
Q Consensus 269 ~~vDLV~ADG-s~d~sg~~~~qe~~s~~L~~~el~~Al~~Lr~GG~fVlK~F 319 (399)
..+|+|++.+ ...... +.. -....+.-+..+|+|||.+|+=+.
T Consensus 95 ~~fD~v~~~~~~~~~~~--~~~------~~~~~l~~~~~~L~pgG~l~~~~~ 138 (243)
T 3d2l_A 95 EPVDAITILCDSLNYLQ--TEA------DVKQTFDSAARLLTDGGKLLFDVH 138 (243)
T ss_dssp SCEEEEEECTTGGGGCC--SHH------HHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCcCEEEEeCCchhhcC--CHH------HHHHHHHHHHHhcCCCeEEEEEcC
Confidence 5699999875 333221 111 122334556788999999998443
No 205
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=90.03 E-value=1.1 Score=41.99 Aligned_cols=44 Identities=16% Similarity=0.105 Sum_probs=27.3
Q ss_pred CcccEEEec-CCCCCCCCCchhHHHHHHHHHHHHHHHHhccCCCCEEEEeEccC
Q psy15838 269 SHCFLVTAD-GSFDCQGNPGEQEILVGKLHYREVQIALSLLHNGGNLVIKIFTI 321 (399)
Q Consensus 269 ~~vDLV~AD-Gs~d~sg~~~~qe~~s~~L~~~el~~Al~~Lr~GG~fVlK~F~~ 321 (399)
+.+|+|++- +..... +. .-....+.-+..+|+|||.||+-++..
T Consensus 149 ~~fD~v~~~~~~~~~~---~~------~~~~~~l~~~~~~L~pgG~l~~~~~~~ 193 (299)
T 3g2m_A 149 KRFGTVVISSGSINEL---DE------ADRRGLYASVREHLEPGGKFLLSLAMS 193 (299)
T ss_dssp CCEEEEEECHHHHTTS---CH------HHHHHHHHHHHHHEEEEEEEEEEEECC
T ss_pred CCcCEEEECCcccccC---CH------HHHHHHHHHHHHHcCCCcEEEEEeecC
Confidence 569988853 323221 11 112233445668999999999998876
No 206
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=89.93 E-value=1.5 Score=42.18 Aligned_cols=33 Identities=6% Similarity=0.024 Sum_probs=23.9
Q ss_pred HHHHHHhCCCCCCCCCCceEEEeccCCChhHHHHHHh
Q psy15838 149 FHEIVHSYNIVPQQENSFTSIHLCEAPGAFITSLNHY 185 (399)
Q Consensus 149 L~EId~~f~l~~~~~~~~~vlDLceaPGgFsqaln~y 185 (399)
..+|.+.+++-+. .++||+|||+|.++..+...
T Consensus 179 ~~~l~~~~~~~~~----~~vLDvG~G~G~~~~~l~~~ 211 (359)
T 1x19_A 179 IQLLLEEAKLDGV----KKMIDVGGGIGDISAAMLKH 211 (359)
T ss_dssp HHHHHHHCCCTTC----CEEEEESCTTCHHHHHHHHH
T ss_pred HHHHHHhcCCCCC----CEEEEECCcccHHHHHHHHH
Confidence 4466777764332 49999999999999876553
No 207
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=89.76 E-value=0.59 Score=44.06 Aligned_cols=44 Identities=20% Similarity=0.161 Sum_probs=28.2
Q ss_pred CcccEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHhccCCCCEEEEeEcc
Q psy15838 269 SHCFLVTADGSFDCQGNPGEQEILVGKLHYREVQIALSLLHNGGNLVIKIFT 320 (399)
Q Consensus 269 ~~vDLV~ADGs~d~sg~~~~qe~~s~~L~~~el~~Al~~Lr~GG~fVlK~F~ 320 (399)
+.+|+|++.+......++ +. ....+.-+..+|+|||.+|+=.+.
T Consensus 186 ~~fD~v~~~~~~~~~~~~--~~------~~~~l~~~~~~LkpgG~l~i~~~~ 229 (305)
T 3ocj_A 186 EGYDLLTSNGLNIYEPDD--AR------VTELYRRFWQALKPGGALVTSFLT 229 (305)
T ss_dssp SCEEEEECCSSGGGCCCH--HH------HHHHHHHHHHHEEEEEEEEEECCC
T ss_pred CCeEEEEECChhhhcCCH--HH------HHHHHHHHHHhcCCCeEEEEEecC
Confidence 579999997765433222 11 112344566899999999986533
No 208
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=89.53 E-value=0.53 Score=44.83 Aligned_cols=31 Identities=16% Similarity=0.281 Sum_probs=22.9
Q ss_pred HHHHHHhCCCCCCCCCCceEEEeccCCChhHHHHHH
Q psy15838 149 FHEIVHSYNIVPQQENSFTSIHLCEAPGAFITSLNH 184 (399)
Q Consensus 149 L~EId~~f~l~~~~~~~~~vlDLceaPGgFsqaln~ 184 (399)
..++.+.+++-+ .++||+|||+|.++..+..
T Consensus 157 ~~~~~~~~~~~~-----~~vlDvG~G~G~~~~~l~~ 187 (334)
T 2ip2_A 157 FHEIPRLLDFRG-----RSFVDVGGGSGELTKAILQ 187 (334)
T ss_dssp HHHHHHHSCCTT-----CEEEEETCTTCHHHHHHHH
T ss_pred HHHHHHhCCCCC-----CEEEEeCCCchHHHHHHHH
Confidence 445666665433 4999999999999987654
No 209
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=89.49 E-value=1.2 Score=42.61 Aligned_cols=35 Identities=14% Similarity=0.320 Sum_probs=26.1
Q ss_pred HHHHHHHHhCCCCCCCCCCceEEEeccCCChhHHHHHH
Q psy15838 147 CKFHEIVHSYNIVPQQENSFTSIHLCEAPGAFITSLNH 184 (399)
Q Consensus 147 ~KL~EId~~f~l~~~~~~~~~vlDLceaPGgFsqaln~ 184 (399)
..+.++.+.+++.+. ..++||+|||+|.++..+..
T Consensus 165 ~~~~~~l~~~~~~~~---~~~vlDvG~G~G~~~~~l~~ 199 (352)
T 3mcz_A 165 QPMVDVVSELGVFAR---ARTVIDLAGGHGTYLAQVLR 199 (352)
T ss_dssp HHHHHHHHTCGGGTT---CCEEEEETCTTCHHHHHHHH
T ss_pred hhHHHHHHhCCCcCC---CCEEEEeCCCcCHHHHHHHH
Confidence 345578888876552 24999999999999987654
No 210
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=88.24 E-value=0.92 Score=39.42 Aligned_cols=42 Identities=14% Similarity=0.065 Sum_probs=27.0
Q ss_pred CcccEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHhccCCCCEEEEeEccC
Q psy15838 269 SHCFLVTADGSFDCQGNPGEQEILVGKLHYREVQIALSLLHNGGNLVIKIFTI 321 (399)
Q Consensus 269 ~~vDLV~ADGs~d~sg~~~~qe~~s~~L~~~el~~Al~~Lr~GG~fVlK~F~~ 321 (399)
+.+|+|++-.. ..+.. -....+.-+..+|+|||.+|+-.+..
T Consensus 93 ~~fD~v~~~~~----~~~~~-------~~~~~l~~~~~~L~pgG~l~~~~~~~ 134 (202)
T 2kw5_A 93 DAWEGIVSIFC----HLPSS-------LRQQLYPKVYQGLKPGGVFILEGFAP 134 (202)
T ss_dssp TTCSEEEEECC----CCCHH-------HHHHHHHHHHTTCCSSEEEEEEEECT
T ss_pred CCccEEEEEhh----cCCHH-------HHHHHHHHHHHhcCCCcEEEEEEecc
Confidence 57999998321 11111 12334455678999999999998754
No 211
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=87.92 E-value=0.22 Score=52.02 Aligned_cols=24 Identities=13% Similarity=0.228 Sum_probs=20.5
Q ss_pred ceEEEeccCCChhHHHHHHhhhcc
Q psy15838 166 FTSIHLCEAPGAFITSLNHYLKLH 189 (399)
Q Consensus 166 ~~vlDLceaPGgFsqaln~yl~~~ 189 (399)
.+|+|.|||.|+|..++.+++...
T Consensus 171 ~~VlDPaCGSG~fLi~a~~~l~~~ 194 (541)
T 2ar0_A 171 EVVQDPAAGTAGFLIEADRYVKSQ 194 (541)
T ss_dssp CCEEETTCTTTHHHHHHHHHHHTT
T ss_pred CeEecCCcccchHHHHHHHHHHHh
Confidence 599999999999998888777543
No 212
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=87.54 E-value=1.5 Score=41.81 Aligned_cols=32 Identities=16% Similarity=0.170 Sum_probs=21.5
Q ss_pred eEEEeccCCChhHHHHHHhhhccCCCCccceeccccCCC
Q psy15838 167 TSIHLCEAPGAFITSLNHYLKLHHPRMQWDWIANTLNPH 205 (399)
Q Consensus 167 ~vlDLceaPGgFsqaln~yl~~~~~~~~w~~~a~sLnP~ 205 (399)
+|||+|||.|+|+-.+...- . -..+|+++||.
T Consensus 128 ~VlD~~aG~G~~~i~~a~~g-----~--~~V~avD~np~ 159 (278)
T 3k6r_A 128 LVVDMFAGIGHLSLPIAVYG-----K--AKVIAIEKDPY 159 (278)
T ss_dssp EEEETTCTTTTTTHHHHHHT-----C--CEEEEECCCHH
T ss_pred EEEEecCcCcHHHHHHHHhc-----C--CeEEEEECCHH
Confidence 99999999999976443321 1 13567777664
No 213
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=87.32 E-value=0.52 Score=46.10 Aligned_cols=64 Identities=17% Similarity=0.095 Sum_probs=38.0
Q ss_pred CcccEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHhccCCCCEEEEeEccCCC--CCHHHHHHHHHhcCCe
Q psy15838 269 SHCFLVTADGSFDCQGNPGEQEILVGKLHYREVQIALSLLHNGGNLVIKIFTIFE--SDTICLMYLLACLFTS 339 (399)
Q Consensus 269 ~~vDLV~ADGs~d~sg~~~~qe~~s~~L~~~el~~Al~~Lr~GG~fVlK~F~~~e--~~t~~Ll~lL~~~F~~ 339 (399)
+.+|+|++|..... +.. +. +. ....+..+..+|++||.+|+-.-..+. .....++..++..|..
T Consensus 193 ~~fDlIi~d~~~p~-~~~--~~-l~---~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~ 258 (334)
T 1xj5_A 193 GSYDAVIVDSSDPI-GPA--KE-LF---EKPFFQSVARALRPGGVVCTQAESLWLHMDIIEDIVSNCREIFKG 258 (334)
T ss_dssp TCEEEEEECCCCTT-SGG--GG-GG---SHHHHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHHHHCSS
T ss_pred CCccEEEECCCCcc-Ccc--hh-hh---HHHHHHHHHHhcCCCcEEEEecCCccccHHHHHHHHHHHHHhCcc
Confidence 47999999975322 111 11 10 122344567899999999997322221 1234566778888984
No 214
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=86.68 E-value=4.6 Score=39.22 Aligned_cols=33 Identities=9% Similarity=0.288 Sum_probs=24.6
Q ss_pred HHHHHHHhCCCCCCCCCCceEEEeccCCChhHHHHHH
Q psy15838 148 KFHEIVHSYNIVPQQENSFTSIHLCEAPGAFITSLNH 184 (399)
Q Consensus 148 KL~EId~~f~l~~~~~~~~~vlDLceaPGgFsqaln~ 184 (399)
-..+|.+.+++-+. .++||+|||+|.++..+..
T Consensus 190 ~~~~l~~~~~~~~~----~~vlDvG~G~G~~~~~l~~ 222 (369)
T 3gwz_A 190 EAGQVAAAYDFSGA----ATAVDIGGGRGSLMAAVLD 222 (369)
T ss_dssp HHHHHHHHSCCTTC----SEEEEETCTTSHHHHHHHH
T ss_pred hHHHHHHhCCCccC----cEEEEeCCCccHHHHHHHH
Confidence 35567777764332 4999999999999987654
No 215
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=85.55 E-value=1.1 Score=38.87 Aligned_cols=45 Identities=16% Similarity=0.118 Sum_probs=29.5
Q ss_pred CcccEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHhccCCCCEEEEeEccCC
Q psy15838 269 SHCFLVTADGSFDCQGNPGEQEILVGKLHYREVQIALSLLHNGGNLVIKIFTIF 322 (399)
Q Consensus 269 ~~vDLV~ADGs~d~sg~~~~qe~~s~~L~~~el~~Al~~Lr~GG~fVlK~F~~~ 322 (399)
+.+|+|++.+....- +..+ ....+.-+..+|+|||.+|+-.+...
T Consensus 88 ~~fD~v~~~~~l~~~--~~~~-------~~~~l~~~~~~LkpgG~l~~~~~~~~ 132 (209)
T 2p8j_A 88 ESMSFVYSYGTIFHM--RKND-------VKEAIDEIKRVLKPGGLACINFLTTK 132 (209)
T ss_dssp TCEEEEEECSCGGGS--CHHH-------HHHHHHHHHHHEEEEEEEEEEEEETT
T ss_pred CceeEEEEcChHHhC--CHHH-------HHHHHHHHHHHcCCCcEEEEEEeccc
Confidence 579999987654322 1111 22334456689999999999888753
No 216
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=84.34 E-value=0.65 Score=46.37 Aligned_cols=51 Identities=14% Similarity=0.079 Sum_probs=29.2
Q ss_pred cCchhhHHHHHHhhcchhhhHHHHHHHHHHHHhCCCCCCCCCCceEEEeccCCChhHH
Q psy15838 123 VNRSSKVVQSVKRFIKPQLATQAWCKFHEIVHSYNIVPQQENSFTSIHLCEAPGAFIT 180 (399)
Q Consensus 123 ~n~~~~i~~~vk~~~~~e~~trAw~KL~EId~~f~l~~~~~~~~~vlDLceaPGgFsq 180 (399)
.+.|+.+.-|- ...+..-|+.|+.+.+. ..-.+++. .+|||||||.|-.+-
T Consensus 49 f~sY~~~~iH~-~ML~D~~Rt~aY~~Ai~--~~~~~~~~----k~VLDvG~GtGiLs~ 99 (376)
T 4hc4_A 49 YECYSDVSVHE-EMIADRVRTDAYRLGIL--RNWAALRG----KTVLDVGAGTGILSI 99 (376)
T ss_dssp CCCHHHHHHHH-HHHHCHHHHHHHHHHHH--TTHHHHTT----CEEEEETCTTSHHHH
T ss_pred hhhccCcHHHH-HHhCCHHHHHHHHHHHH--hCHHhcCC----CEEEEeCCCccHHHH
Confidence 35555554432 23455667777766542 11112232 389999999996654
No 217
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=83.98 E-value=0.99 Score=46.29 Aligned_cols=19 Identities=5% Similarity=-0.055 Sum_probs=15.7
Q ss_pred ceEEEeccCCChhHHHHHH
Q psy15838 166 FTSIHLCEAPGAFITSLNH 184 (399)
Q Consensus 166 ~~vlDLceaPGgFsqaln~ 184 (399)
.+|||+|||.|.++..+..
T Consensus 160 ~~VLDiGcGtG~la~~la~ 178 (480)
T 3b3j_A 160 KIVLDVGCGSGILSFFAAQ 178 (480)
T ss_dssp CEEEEESCSTTHHHHHHHH
T ss_pred CEEEEecCcccHHHHHHHH
Confidence 4999999999998875543
No 218
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=83.68 E-value=2.6 Score=40.47 Aligned_cols=19 Identities=5% Similarity=-0.043 Sum_probs=15.6
Q ss_pred ceEEEeccCCChhHHHHHH
Q psy15838 166 FTSIHLCEAPGAFITSLNH 184 (399)
Q Consensus 166 ~~vlDLceaPGgFsqaln~ 184 (399)
.+|||+|||.|.++..+..
T Consensus 40 ~~VLDiGcGtG~ls~~la~ 58 (328)
T 1g6q_1 40 KIVLDVGCGTGILSMFAAK 58 (328)
T ss_dssp CEEEEETCTTSHHHHHHHH
T ss_pred CEEEEecCccHHHHHHHHH
Confidence 3999999999998875543
No 219
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=83.48 E-value=2.4 Score=39.71 Aligned_cols=75 Identities=8% Similarity=-0.029 Sum_probs=47.6
Q ss_pred CcccEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHhccCCCCEEEEeEccCCC--CCHHHHHHHHHhcCCeeeeecC-
Q psy15838 269 SHCFLVTADGSFDCQGNPGEQEILVGKLHYREVQIALSLLHNGGNLVIKIFTIFE--SDTICLMYLLACLFTSVDLFKP- 345 (399)
Q Consensus 269 ~~vDLV~ADGs~d~sg~~~~qe~~s~~L~~~el~~Al~~Lr~GG~fVlK~F~~~e--~~t~~Ll~lL~~~F~~V~v~KP- 345 (399)
.++|+|++|... + .. .+..+...|+|||.+|+..-.... .....+...+...|..+..+.-
T Consensus 138 ~~fD~Ii~d~~d-----p--~~---------~~~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~~~~~~~~ 201 (262)
T 2cmg_A 138 KKYDLIFCLQEP-----D--IH---------RIDGLKRMLKEDGVFISVAKHPLLEHVSMQNALKNMGGVFSVAMPFVAP 201 (262)
T ss_dssp CCEEEEEESSCC-----C--HH---------HHHHHHTTEEEEEEEEEEEECTTTCHHHHHHHHHHHHTTCSEEEEECCT
T ss_pred hhCCEEEECCCC-----h--HH---------HHHHHHHhcCCCcEEEEEcCCcccCHHHHHHHHHHHHHhCCceEEEEEc
Confidence 469999999431 1 11 344678899999999997533221 1245566778889998877653
Q ss_pred CCCCCCCceEEEEEee
Q psy15838 346 ATSKEGNSEIYVICRD 361 (399)
Q Consensus 346 ~aSR~~sSE~YlVc~g 361 (399)
..+ ..--.|++|..
T Consensus 202 vP~--~g~~~~~~as~ 215 (262)
T 2cmg_A 202 LRI--LSNKGYIYASF 215 (262)
T ss_dssp TCT--TCCEEEEEEES
T ss_pred cCC--CcccEEEEeeC
Confidence 222 33335777754
No 220
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=83.05 E-value=0.82 Score=45.91 Aligned_cols=17 Identities=12% Similarity=0.022 Sum_probs=14.6
Q ss_pred ceEEEeccCCChhHHHH
Q psy15838 166 FTSIHLCEAPGAFITSL 182 (399)
Q Consensus 166 ~~vlDLceaPGgFsqal 182 (399)
.+|||||+|+|+|+-.+
T Consensus 54 ~~VLDlfaGtG~~sl~a 70 (392)
T 3axs_A 54 VKVADPLSASGIRAIRF 70 (392)
T ss_dssp EEEEESSCTTSHHHHHH
T ss_pred CEEEECCCcccHHHHHH
Confidence 49999999999998743
No 221
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=82.96 E-value=3.9 Score=38.77 Aligned_cols=31 Identities=13% Similarity=0.227 Sum_probs=21.5
Q ss_pred HHHHHhCCCCCCCCCCceEEEeccCCChhHHHHHH
Q psy15838 150 HEIVHSYNIVPQQENSFTSIHLCEAPGAFITSLNH 184 (399)
Q Consensus 150 ~EId~~f~l~~~~~~~~~vlDLceaPGgFsqaln~ 184 (399)
-+|.+.+++-+ ..++||+|||+|.++..+..
T Consensus 159 ~~~~~~~~~~~----~~~vlDvG~G~G~~~~~l~~ 189 (332)
T 3i53_A 159 TGIAAKYDWAA----LGHVVDVGGGSGGLLSALLT 189 (332)
T ss_dssp TTGGGSSCCGG----GSEEEEETCTTSHHHHHHHH
T ss_pred HHHHHhCCCCC----CCEEEEeCCChhHHHHHHHH
Confidence 34555555322 25999999999999986644
No 222
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=79.62 E-value=16 Score=35.31 Aligned_cols=36 Identities=8% Similarity=0.015 Sum_probs=25.8
Q ss_pred HHHHHHHHHHhCCCCCCCCCCceEEEeccCCChhHHHHHH
Q psy15838 145 AWCKFHEIVHSYNIVPQQENSFTSIHLCEAPGAFITSLNH 184 (399)
Q Consensus 145 Aw~KL~EId~~f~l~~~~~~~~~vlDLceaPGgFsqaln~ 184 (399)
+.....+|.+.+++-.. -++||+|||.|.++.++..
T Consensus 164 ~~~~~~~~~~~~~~~~~----~~v~DvGgG~G~~~~~l~~ 199 (353)
T 4a6d_A 164 WSVNGRSVLTAFDLSVF----PLMCDLGGGAGALAKECMS 199 (353)
T ss_dssp HHHHHHHHHHSSCGGGC----SEEEEETCTTSHHHHHHHH
T ss_pred HHHHHHHHHHhcCcccC----CeEEeeCCCCCHHHHHHHH
Confidence 33445577777765433 3899999999999987654
No 223
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=78.59 E-value=26 Score=38.76 Aligned_cols=46 Identities=9% Similarity=0.108 Sum_probs=29.7
Q ss_pred HHHHHHHHHhccCCCCEEEEeEccCCC--C--CHHHHHHHHHhcCCeeee
Q psy15838 297 HYREVQIALSLLHNGGNLVIKIFTIFE--S--DTICLMYLLACLFTSVDL 342 (399)
Q Consensus 297 ~~~el~~Al~~Lr~GG~fVlK~F~~~e--~--~t~~Ll~lL~~~F~~V~v 342 (399)
...=+..|+.+|++||.+++=+=.++- . ....+...|...+.-..+
T Consensus 444 y~aFIe~Al~lLKpGGrLAfIlP~s~Lf~sg~~~kkLRk~LLe~~~I~aI 493 (878)
T 3s1s_A 444 EALFLELVTELVQDGTVISAIMPKQYLTAQGNESKAFREFLVGNFGLEHI 493 (878)
T ss_dssp HHHHHHHHHHHSCTTCEEEEEEETHHHHCCSHHHHHHHHHHTTTTCEEEE
T ss_pred HHHHHHHHHHhcCCCcEEEEEEChHHhccCChHHHHHHHHHHhCCCeEEE
Confidence 444567789999999988877666542 1 145677766666553333
No 224
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=78.56 E-value=4.3 Score=38.96 Aligned_cols=19 Identities=5% Similarity=0.052 Sum_probs=16.4
Q ss_pred ceEEEeccCCChhHHHHHH
Q psy15838 166 FTSIHLCEAPGAFITSLNH 184 (399)
Q Consensus 166 ~~vlDLceaPGgFsqaln~ 184 (399)
.++||+|||.|.++..+..
T Consensus 190 ~~vlDvG~G~G~~~~~l~~ 208 (352)
T 1fp2_A 190 ESIVDVGGGTGTTAKIICE 208 (352)
T ss_dssp SEEEEETCTTSHHHHHHHH
T ss_pred ceEEEeCCCccHHHHHHHH
Confidence 4999999999999987654
No 225
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=78.17 E-value=5 Score=38.59 Aligned_cols=19 Identities=5% Similarity=0.135 Sum_probs=16.5
Q ss_pred ceEEEeccCCChhHHHHHH
Q psy15838 166 FTSIHLCEAPGAFITSLNH 184 (399)
Q Consensus 166 ~~vlDLceaPGgFsqaln~ 184 (399)
.++||+|||.|.++..+..
T Consensus 195 ~~vlDvG~G~G~~~~~l~~ 213 (358)
T 1zg3_A 195 ESLVDVGGGTGGVTKLIHE 213 (358)
T ss_dssp SEEEEETCTTSHHHHHHHH
T ss_pred CEEEEECCCcCHHHHHHHH
Confidence 3999999999999987655
No 226
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=75.63 E-value=3.7 Score=38.54 Aligned_cols=38 Identities=8% Similarity=-0.115 Sum_probs=24.8
Q ss_pred HHHHHHHHHhccCCCCEEEEeEccCCCCCHHHHHHHHHhc-CC
Q psy15838 297 HYREVQIALSLLHNGGNLVIKIFTIFESDTICLMYLLACL-FT 338 (399)
Q Consensus 297 ~~~el~~Al~~Lr~GG~fVlK~F~~~e~~t~~Ll~lL~~~-F~ 338 (399)
+..-+.-+...|+++|.||+=--.+ ...+...|... |.
T Consensus 104 I~~IL~~~~~~L~~~~~lIlq~~~~----~~~lr~~L~~~Gf~ 142 (244)
T 3gnl_A 104 IRTILEEGAAKLAGVTKLILQPNIA----AWQLREWSEQNNWL 142 (244)
T ss_dssp HHHHHHHTGGGGTTCCEEEEEESSC----HHHHHHHHHHHTEE
T ss_pred HHHHHHHHHHHhCCCCEEEEEcCCC----hHHHHHHHHHCCCE
Confidence 3334445678899999999876543 56666655554 44
No 227
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=75.03 E-value=2.2 Score=42.35 Aligned_cols=20 Identities=20% Similarity=0.263 Sum_probs=17.0
Q ss_pred CceEEEeccCCChhHHHHHH
Q psy15838 165 SFTSIHLCEAPGAFITSLNH 184 (399)
Q Consensus 165 ~~~vlDLceaPGgFsqaln~ 184 (399)
.++++||+||.||++..+..
T Consensus 2 ~~~vidLFsG~GGlslG~~~ 21 (376)
T 3g7u_A 2 SLNVIDLFSGVGGLSLGAAR 21 (376)
T ss_dssp CCEEEEETCTTSHHHHHHHH
T ss_pred CCeEEEEccCcCHHHHHHHH
Confidence 36899999999999987654
No 228
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=74.28 E-value=6.2 Score=36.44 Aligned_cols=36 Identities=19% Similarity=0.028 Sum_probs=23.2
Q ss_pred HHHHHHHHHhccCCCCEEEEeEccCCCCCHHHHHHHHHhc
Q psy15838 297 HYREVQIALSLLHNGGNLVIKIFTIFESDTICLMYLLACL 336 (399)
Q Consensus 297 ~~~el~~Al~~Lr~GG~fVlK~F~~~e~~t~~Ll~lL~~~ 336 (399)
+..-+.-+...|++||.||+=--+ ....+...|...
T Consensus 98 i~~Il~~~~~~L~~~~~lVlq~~~----~~~~vr~~L~~~ 133 (225)
T 3kr9_A 98 IARILEEGLGKLANVERLILQPNN----REDDLRIWLQDH 133 (225)
T ss_dssp HHHHHHHTGGGCTTCCEEEEEESS----CHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhCCCCEEEEECCC----CHHHHHHHHHHC
Confidence 333445567899999999984432 356666655543
No 229
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=73.23 E-value=57 Score=31.50 Aligned_cols=39 Identities=10% Similarity=-0.097 Sum_probs=24.6
Q ss_pred CcccEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHhccCCCCEE-EEeEc
Q psy15838 269 SHCFLVTADGSFDCQGNPGEQEILVGKLHYREVQIALSLLHNGGNL-VIKIF 319 (399)
Q Consensus 269 ~~vDLV~ADGs~d~sg~~~~qe~~s~~L~~~el~~Al~~Lr~GG~f-VlK~F 319 (399)
..+|+|++|.-... .. ....+.-|..+|++||.+ |+=+.
T Consensus 240 ~~fD~Vi~~~p~~~------~~------~~~~l~~~~~~LkpgG~~~~~~~~ 279 (373)
T 2qm3_A 240 HKFDTFITDPPETL------EA------IRAFVGRGIATLKGPRCAGYFGIT 279 (373)
T ss_dssp SCBSEEEECCCSSH------HH------HHHHHHHHHHTBCSTTCEEEEEEC
T ss_pred CCccEEEECCCCch------HH------HHHHHHHHHHHcccCCeEEEEEEe
Confidence 46999999963221 11 134455678899999954 44444
No 230
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=72.69 E-value=16 Score=35.11 Aligned_cols=19 Identities=11% Similarity=0.118 Sum_probs=16.3
Q ss_pred ceEEEeccCCChhHHHHHH
Q psy15838 166 FTSIHLCEAPGAFITSLNH 184 (399)
Q Consensus 166 ~~vlDLceaPGgFsqaln~ 184 (399)
.++||+|||+|.++..+..
T Consensus 181 ~~vlDvG~G~G~~~~~l~~ 199 (363)
T 3dp7_A 181 KRLLDIGGNTGKWATQCVQ 199 (363)
T ss_dssp SEEEEESCTTCHHHHHHHH
T ss_pred CEEEEeCCCcCHHHHHHHH
Confidence 5999999999999986644
No 231
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=71.17 E-value=2.4 Score=43.68 Aligned_cols=21 Identities=19% Similarity=0.284 Sum_probs=18.2
Q ss_pred CCceEEEeccCCChhHHHHHH
Q psy15838 164 NSFTSIHLCEAPGAFITSLNH 184 (399)
Q Consensus 164 ~~~~vlDLceaPGgFsqaln~ 184 (399)
..++++||+||.||++..+..
T Consensus 87 ~~~~viDLFaG~GGlslG~~~ 107 (482)
T 3me5_A 87 YAFRFIDLFAGIGGIRRGFES 107 (482)
T ss_dssp CSEEEEEESCTTSHHHHHHHT
T ss_pred ccceEEEecCCccHHHHHHHH
Confidence 469999999999999987654
No 232
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=70.05 E-value=9 Score=35.52 Aligned_cols=32 Identities=19% Similarity=0.039 Sum_probs=21.8
Q ss_pred HHHHHhccCCCCEEEEeEccCCCCCHHHHHHHHHhc
Q psy15838 301 VQIALSLLHNGGNLVIKIFTIFESDTICLMYLLACL 336 (399)
Q Consensus 301 l~~Al~~Lr~GG~fVlK~F~~~e~~t~~Ll~lL~~~ 336 (399)
+.-+...|+++|.||+=--.. ...+...|...
T Consensus 108 L~~~~~~l~~~~~lIlqp~~~----~~~lr~~L~~~ 139 (230)
T 3lec_A 108 LNNDIDKLQHVKTLVLQPNNR----EDDLRKWLAAN 139 (230)
T ss_dssp HHHTGGGGTTCCEEEEEESSC----HHHHHHHHHHT
T ss_pred HHHHHHHhCcCCEEEEECCCC----hHHHHHHHHHC
Confidence 444567899999999877543 56666655543
No 233
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=67.24 E-value=8.4 Score=36.85 Aligned_cols=20 Identities=30% Similarity=0.185 Sum_probs=16.7
Q ss_pred HHHhccCCCCEEEEeEccCC
Q psy15838 303 IALSLLHNGGNLVIKIFTIF 322 (399)
Q Consensus 303 ~Al~~Lr~GG~fVlK~F~~~ 322 (399)
-....|+|||.|++-.+...
T Consensus 185 ~l~~~L~PGG~Lvls~~~~d 204 (277)
T 3giw_A 185 RLLEPLPSGSYLAMSIGTAE 204 (277)
T ss_dssp HHHTTSCTTCEEEEEEECCT
T ss_pred HHHHhCCCCcEEEEEeccCC
Confidence 45678999999999998863
No 234
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=67.05 E-value=13 Score=32.07 Aligned_cols=19 Identities=11% Similarity=-0.006 Sum_probs=16.1
Q ss_pred ceEEEeccCCChhHHHHHH
Q psy15838 166 FTSIHLCEAPGAFITSLNH 184 (399)
Q Consensus 166 ~~vlDLceaPGgFsqaln~ 184 (399)
.++||+|||.|.++.++..
T Consensus 53 ~~vlD~gcG~G~~~~~l~~ 71 (200)
T 1ne2_A 53 RSVIDAGTGNGILACGSYL 71 (200)
T ss_dssp SEEEEETCTTCHHHHHHHH
T ss_pred CEEEEEeCCccHHHHHHHH
Confidence 3999999999999986654
No 235
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=65.21 E-value=14 Score=33.64 Aligned_cols=69 Identities=16% Similarity=0.075 Sum_probs=42.9
Q ss_pred CcccEEEecCCCCC-CCCCchhHHHHHHHHHHHHHHHHhccCCCCEEEEeEccCC-------------CCCHHHHHHHHH
Q psy15838 269 SHCFLVTADGSFDC-QGNPGEQEILVGKLHYREVQIALSLLHNGGNLVIKIFTIF-------------ESDTICLMYLLA 334 (399)
Q Consensus 269 ~~vDLV~ADGs~d~-sg~~~~qe~~s~~L~~~el~~Al~~Lr~GG~fVlK~F~~~-------------e~~t~~Ll~lL~ 334 (399)
.++|+|+|=+.... ..+ .+ =....+.-+.++|+|||.||+-..... ......+..+|.
T Consensus 155 ~~fD~V~~~~~l~~i~~~--~~------~~~~~l~~i~r~LKPGG~li~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~l~ 226 (263)
T 2a14_A 155 PLADCVLTLLAMECACCS--LD------AYRAALCNLASLLKPGGHLVTTVTLRLPSYMVGKREFSCVALEKGEVEQAVL 226 (263)
T ss_dssp CCEEEEEEESCHHHHCSS--HH------HHHHHHHHHHTTEEEEEEEEEEEESSCCEEEETTEEEECCCCCHHHHHHHHH
T ss_pred CCCCEeeehHHHHHhcCC--HH------HHHHHHHHHHHHcCCCcEEEEEEeecCccceeCCeEeeccccCHHHHHHHHH
Confidence 47999998776542 111 11 123355556789999999999853221 112446777777
Q ss_pred hc-CCeeeeecC
Q psy15838 335 CL-FTSVDLFKP 345 (399)
Q Consensus 335 ~~-F~~V~v~KP 345 (399)
.. |+-+.+..+
T Consensus 227 ~aGF~i~~~~~~ 238 (263)
T 2a14_A 227 DAGFDIEQLLHS 238 (263)
T ss_dssp HTTEEEEEEEEE
T ss_pred HCCCEEEEEeec
Confidence 65 887777654
No 236
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=62.39 E-value=4.8 Score=35.30 Aligned_cols=33 Identities=9% Similarity=-0.009 Sum_probs=23.0
Q ss_pred ceEEEeccCCChhHHHHHHhhhccCCCCccceeccccCC
Q psy15838 166 FTSIHLCEAPGAFITSLNHYLKLHHPRMQWDWIANTLNP 204 (399)
Q Consensus 166 ~~vlDLceaPGgFsqaln~yl~~~~~~~~w~~~a~sLnP 204 (399)
.++||||||+|.++..+.... + ..+.+|++++|
T Consensus 29 ~~vLDiGcG~G~~~~~la~~~----p--~~~v~gvD~s~ 61 (218)
T 3mq2_A 29 DVVLDVGTGDGKHPYKVARQN----P--SRLVVALDADK 61 (218)
T ss_dssp EEEEEESCTTCHHHHHHHHHC----T--TEEEEEEESCG
T ss_pred CEEEEecCCCCHHHHHHHHHC----C--CCEEEEEECCH
Confidence 499999999999998765531 1 13456666654
No 237
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=62.16 E-value=13 Score=34.47 Aligned_cols=41 Identities=10% Similarity=0.068 Sum_probs=27.6
Q ss_pred CcccEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHhccCCCCEEEEeEcc
Q psy15838 269 SHCFLVTADGSFDCQGNPGEQEILVGKLHYREVQIALSLLHNGGNLVIKIFT 320 (399)
Q Consensus 269 ~~vDLV~ADGs~d~sg~~~~qe~~s~~L~~~el~~Al~~Lr~GG~fVlK~F~ 320 (399)
..||+|++=.+.-.-. +.+ ..+.-+.++|+|||.+++-...
T Consensus 134 ~~fD~V~~~~~l~~~~--d~~---------~~l~~~~r~LkpgG~l~i~~~~ 174 (292)
T 2aot_A 134 QKWDFIHMIQMLYYVK--DIP---------ATLKFFHSLLGTNAKMLIIVVS 174 (292)
T ss_dssp CCEEEEEEESCGGGCS--CHH---------HHHHHHHHTEEEEEEEEEEEEC
T ss_pred CceeEEEEeeeeeecC--CHH---------HHHHHHHHHcCCCcEEEEEEec
Confidence 5799999876654332 222 2234456899999999997654
No 238
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=61.95 E-value=5.9 Score=38.05 Aligned_cols=27 Identities=30% Similarity=0.390 Sum_probs=22.4
Q ss_pred HHHHHHHHHhccCCCCEEEEeEccCCC
Q psy15838 297 HYREVQIALSLLHNGGNLVIKIFTIFE 323 (399)
Q Consensus 297 ~~~el~~Al~~Lr~GG~fVlK~F~~~e 323 (399)
....|..|..+|++||.+++=.|++.|
T Consensus 224 l~~~l~~~~~~l~~ggr~~visfhsle 250 (301)
T 1m6y_A 224 LKEFLKKAEDLLNPGGRIVVISFHSLE 250 (301)
T ss_dssp HHHHHHHGGGGEEEEEEEEEEESSHHH
T ss_pred HHHHHHHHHHhhCCCCEEEEEecCcHH
Confidence 345566788999999999999999866
No 239
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=60.87 E-value=26 Score=38.92 Aligned_cols=18 Identities=22% Similarity=0.274 Sum_probs=15.4
Q ss_pred ceEEEeccCCChhHHHHH
Q psy15838 166 FTSIHLCEAPGAFITSLN 183 (399)
Q Consensus 166 ~~vlDLceaPGgFsqaln 183 (399)
.+|||||||+|.++..+.
T Consensus 723 ~rVLDVGCGTG~lai~LA 740 (950)
T 3htx_A 723 STLVDFGCGSGSLLDSLL 740 (950)
T ss_dssp SEEEEETCSSSHHHHHHT
T ss_pred CEEEEECCCCCHHHHHHH
Confidence 499999999999988543
No 240
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=58.09 E-value=15 Score=31.75 Aligned_cols=19 Identities=11% Similarity=-0.046 Sum_probs=16.1
Q ss_pred ceEEEeccCCChhHHHHHH
Q psy15838 166 FTSIHLCEAPGAFITSLNH 184 (399)
Q Consensus 166 ~~vlDLceaPGgFsqaln~ 184 (399)
.++||+|||+|+++.++..
T Consensus 51 ~~vlD~g~G~G~~~~~l~~ 69 (207)
T 1wy7_A 51 KVVADLGAGTGVLSYGALL 69 (207)
T ss_dssp CEEEEETCTTCHHHHHHHH
T ss_pred CEEEEeeCCCCHHHHHHHH
Confidence 3999999999999986544
No 241
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=57.77 E-value=5.7 Score=38.11 Aligned_cols=39 Identities=8% Similarity=0.103 Sum_probs=25.6
Q ss_pred CceEEEeccCCChhHHHHHHhhhccCCCCccceeccccCC
Q psy15838 165 SFTSIHLCEAPGAFITSLNHYLKLHHPRMQWDWIANTLNP 204 (399)
Q Consensus 165 ~~~vlDLceaPGgFsqaln~yl~~~~~~~~w~~~a~sLnP 204 (399)
..+|+|+|||+|+|+.++..++.... .-....+|++++|
T Consensus 131 ~~~VlDp~cGsG~~l~~~~~~~~~~~-~~~~~v~GiDi~~ 169 (344)
T 2f8l_A 131 NVSILDPACGTANLLTTVINQLELKG-DVDVHASGVDVDD 169 (344)
T ss_dssp EEEEEETTCTTSHHHHHHHHHHHTTS-SCEEEEEEEESCH
T ss_pred CCEEEeCCCCccHHHHHHHHHHHHhc-CCCceEEEEECCH
Confidence 35999999999999998877664321 0012345555554
No 242
>3izx_A Structural protein VP3; cytoplasmic polyhedrosis virus, 3D reconstruction, cryoem, F model; 3.10A {Bombyx mori cypovirus 1} PDB: 3iz3_A 3j17_A* 3cnf_T
Probab=57.53 E-value=17 Score=40.02 Aligned_cols=86 Identities=15% Similarity=0.007 Sum_probs=60.9
Q ss_pred CCcccEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHhccCCCCEEEEeEccCCCCCHHHHHHHHHhcCC---eeeeec
Q psy15838 268 ASHCFLVTADGSFDCQGNPGEQEILVGKLHYREVQIALSLLHNGGNLVIKIFTIFESDTICLMYLLACLFT---SVDLFK 344 (399)
Q Consensus 268 ~~~vDLV~ADGs~d~sg~~~~qe~~s~~L~~~el~~Al~~Lr~GG~fVlK~F~~~e~~t~~Ll~lL~~~F~---~V~v~K 344 (399)
+-.+|+|+||+.-...+ ..++ +......++..++. ---.+++|+-....+...++...|..++. ...++|
T Consensus 607 Ni~~divISDidQs~~~--~f~~--m~~~t~~~l~~c~s---~s~~~l~Klnyps~~lLNsI~e~L~~~g~~f~~~~iVr 679 (1058)
T 3izx_A 607 NISADFIICDINSYEDQ--SFES--MFSETISVVTTCAS---AATRALVKINHPSEYMINSVIERLSQLGGVFYHTALLK 679 (1058)
T ss_dssp CCCCSEEEECCCCCCTT--CSHH--HHHHHHHHHHHHHH---SSSEEEEEEECCHHHHHHHHHHHHHHSSSSCCEEEEEE
T ss_pred cccccEEEEeccccccc--hHHH--HHHHHHHHHHHHHh---hhhcEEEEecCchHHHHHHHHHHHHHhCCeEEeeeEEE
Confidence 45699999999865432 2222 23455555555554 44578999988766667777777777665 345789
Q ss_pred CCCCCCCCceEEEEEe
Q psy15838 345 PATSKEGNSEIYVICR 360 (399)
Q Consensus 345 P~aSR~~sSE~YlVc~ 360 (399)
-+++++.+.|+|++-.
T Consensus 680 ~a~Qnp~T~E~fl~i~ 695 (1058)
T 3izx_A 680 TASQNPYSYETYIYIT 695 (1058)
T ss_dssp CSSSCSSCCEEEEEEE
T ss_pred eeccCCCCceEEEEEe
Confidence 9999999999999876
No 243
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=57.03 E-value=7.9 Score=34.95 Aligned_cols=32 Identities=19% Similarity=0.016 Sum_probs=21.9
Q ss_pred ceEEEeccCCChhHHHHHHhhhccCCCCccceeccccC
Q psy15838 166 FTSIHLCEAPGAFITSLNHYLKLHHPRMQWDWIANTLN 203 (399)
Q Consensus 166 ~~vlDLceaPGgFsqaln~yl~~~~~~~~w~~~a~sLn 203 (399)
.++||||||+|.++..+... . .....+|+++.
T Consensus 26 ~~vLDiGCG~G~~~~~la~~----~--~~~~v~GvD~s 57 (225)
T 3p2e_A 26 RVHIDLGTGDGRNIYKLAIN----D--QNTFYIGIDPV 57 (225)
T ss_dssp EEEEEETCTTSHHHHHHHHT----C--TTEEEEEECSC
T ss_pred CEEEEEeccCcHHHHHHHHh----C--CCCEEEEEeCC
Confidence 48999999999999865431 1 12345677665
No 244
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=55.83 E-value=6 Score=38.14 Aligned_cols=76 Identities=13% Similarity=0.087 Sum_probs=44.8
Q ss_pred CcccEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHhccCCCCEEEEeEccCCCCCHHHHHHHHHhcCCeeeeecCCCC
Q psy15838 269 SHCFLVTADGSFDCQGNPGEQEILVGKLHYREVQIALSLLHNGGNLVIKIFTIFESDTICLMYLLACLFTSVDLFKPATS 348 (399)
Q Consensus 269 ~~vDLV~ADGs~d~sg~~~~qe~~s~~L~~~el~~Al~~Lr~GG~fVlK~F~~~e~~t~~Ll~lL~~~F~~V~v~KP~aS 348 (399)
..+|+|++|.-.. +. ..+..+..+|++||.+++=.+... ...+...+...+ .+.+..-...
T Consensus 257 ~~fD~Vi~dpP~~--~~-------------~~l~~~~~~L~~gG~l~~~~~~~~---~~~~~~~l~~~~-~~~i~~~~~v 317 (336)
T 2yx1_A 257 VKGNRVIMNLPKF--AH-------------KFIDKALDIVEEGGVIHYYTIGKD---FDKAIKLFEKKC-DCEVLEKRIV 317 (336)
T ss_dssp CCEEEEEECCTTT--GG-------------GGHHHHHHHEEEEEEEEEEEEESS---SHHHHHHHHHHS-EEEEEEEEEE
T ss_pred CCCcEEEECCcHh--HH-------------HHHHHHHHHcCCCCEEEEEEeecC---chHHHHHHHHhc-CCcEEEEEEE
Confidence 3599999985322 10 234456788999999999877764 456666666653 3333222222
Q ss_pred CCCCceEEEEEeecc
Q psy15838 349 KEGNSEIYVICRDFH 363 (399)
Q Consensus 349 R~~sSE~YlVc~gf~ 363 (399)
|.-+...|.+|..++
T Consensus 318 ~~~~p~~~~~~~~~~ 332 (336)
T 2yx1_A 318 KSYAPREYILALDFK 332 (336)
T ss_dssp EEEETTEEEEEEEEE
T ss_pred eccCCCCCEEEEEEE
Confidence 333333666666654
No 245
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=54.27 E-value=20 Score=31.68 Aligned_cols=36 Identities=14% Similarity=0.194 Sum_probs=26.9
Q ss_pred CcccEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHhccCCCCEEEEeEccC
Q psy15838 269 SHCFLVTADGSFDCQGNPGEQEILVGKLHYREVQIALSLLHNGGNLVIKIFTI 321 (399)
Q Consensus 269 ~~vDLV~ADGs~d~sg~~~~qe~~s~~L~~~el~~Al~~Lr~GG~fVlK~F~~ 321 (399)
.++|+|++++..... + ..+...|++||.+|+=+...
T Consensus 162 ~~fD~I~~~~~~~~~--~---------------~~~~~~LkpgG~lvi~~~~~ 197 (227)
T 1r18_A 162 APYNAIHVGAAAPDT--P---------------TELINQLASGGRLIVPVGPD 197 (227)
T ss_dssp CSEEEEEECSCBSSC--C---------------HHHHHTEEEEEEEEEEESCS
T ss_pred CCccEEEECCchHHH--H---------------HHHHHHhcCCCEEEEEEecC
Confidence 469999999876421 1 23567899999999988753
No 246
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=53.42 E-value=8.9 Score=34.53 Aligned_cols=54 Identities=13% Similarity=0.020 Sum_probs=30.9
Q ss_pred HHhccCCCCEEEEeEccCCCCCHHHHHHHHHhc-CCeeeeecCCCCCCCCceEEEEEeec
Q psy15838 304 ALSLLHNGGNLVIKIFTIFESDTICLMYLLACL-FTSVDLFKPATSKEGNSEIYVICRDF 362 (399)
Q Consensus 304 Al~~Lr~GG~fVlK~F~~~e~~t~~Ll~lL~~~-F~~V~v~KP~aSR~~sSE~YlVc~gf 362 (399)
+...|+++|.+++.+-.. .....+..+|... |..|.+..-. .+..-.++|+-.|
T Consensus 198 ~~~~l~~~g~~~~~~~~~--~~~~~~~~~l~~~Gf~~v~~~~~~---~g~~~~~~~~w~~ 252 (254)
T 2h00_A 198 SLQLKKRLRWYSCMLGKK--CSLAPLKEELRIQGVPKVTYTEFC---QGRTMRWALAWSF 252 (254)
T ss_dssp HHHHGGGBSCEEEEESST--TSHHHHHHHHHHTTCSEEEEEEEE---ETTEEEEEEEEES
T ss_pred HHhcccceEEEEECCCCh--hHHHHHHHHHHHcCCCceEEEEEe---cCCceEEEEEeec
Confidence 456788999777654322 2235566666554 8887765432 2244466666554
No 247
>3mag_A VP39; methylated adenine, methyltransferase, RNA CAP analog, poly (A) polymerase, mRNA processing, transcription; HET: SAH 3MA; 1.80A {Vaccinia virus} SCOP: c.66.1.25 PDB: 1bky_A* 1jsz_A* 1v39_A* 1p39_A* 1vp9_A* 2vp3_A* 1eam_A* 1jte_A* 1jtf_A* 4dcg_A* 3mct_A* 1b42_A* 1eqa_A* 1av6_A* 3er9_A* 2gaf_A 3er8_A 2ga9_A* 3erc_A*
Probab=52.53 E-value=1.4e+02 Score=29.01 Aligned_cols=150 Identities=14% Similarity=0.146 Sum_probs=74.6
Q ss_pred eEEEeccCCChhHHHHHHhhhccCCCCccceeccccCCCcCC-CCCCcEEeccccccccCccccCCCccccCCCChHHHH
Q psy15838 167 TSIHLCEAPGAFITSLNHYLKLHHPRMQWDWIANTLNPHYEG-NSFDEMISDDRLILGTHRKWYFGPDNTGNILVQNFVS 245 (399)
Q Consensus 167 ~vlDLceaPGgFsqaln~yl~~~~~~~~w~~~a~sLnP~~e~-n~~~~vI~dD~~~~~~~~~w~~G~d~tGDI~~~~~i~ 245 (399)
.|+..|+|||..+..|.+....++.+++ |+..+=.|+... .+...+ ..--+..++..+.
T Consensus 63 ~VVYVGSApG~HL~~L~~~fp~~f~~ik--WvLiDPap~~~~l~~~~NV------------------~li~~fvde~dl~ 122 (307)
T 3mag_A 63 TVVYIGSAPGTHIRYLRDHFYNLGVIIK--WMLIDGRHHDPILNGLRDV------------------TLVTRFVDEEYLR 122 (307)
T ss_dssp EEEEESCCSCHHHHHHHHHHHHTTCCCE--EEEEESSCCCGGGTTCTTE------------------EEEECCCCHHHHH
T ss_pred EEEEecccCccHHHHHHHhchhhCCCeE--EEEEcCCcchhhhcCCCcE------------------EEEeccCCHHHHH
Confidence 9999999999999988876665544554 554443333210 000111 1112234566666
Q ss_pred HHHHhhhhhhccCCCCCCCCCCCCcccEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHhccCCCCEEEEeEccCCCCC
Q psy15838 246 HFKQHIGFLLIHDTSLAPHCTHASHCFLVTADGSFDCQGNPGEQEILVGKLHYREVQIALSLLHNGGNLVIKIFTIFESD 325 (399)
Q Consensus 246 ~i~~~v~~~~~~~~~~~~~~~~~~~vDLV~ADGs~d~sg~~~~qe~~s~~L~~~el~~Al~~Lr~GG~fVlK~F~~~e~~ 325 (399)
.+++..+ ..=-|.++|-..+-.|.+...+.+..... .-...+..|+|--+ .+|.--.+...
T Consensus 123 ~l~~~~~----------------~~~iLLISDIRS~r~~~ep~t~~ll~Dy~--lQ~~w~~~LkP~aS-~LKFR~P~p~~ 183 (307)
T 3mag_A 123 SIKKQLH----------------PSKIILISDVRSKRGGNEPSTADLLSNYA--LQNVMISILNPVAS-SLKWRCPFPDQ 183 (307)
T ss_dssp HHHHHHT----------------TSCEEEEECCCC------CCHHHHHHHHH--HHHHHHHHHCCSEE-EEEECCCCGGG
T ss_pred HHHHhcc----------------CCCEEEEEEecCCCCCCCccHHHHHHHHH--HHHHHHHHhhhHHH-hccccCCCCcC
Confidence 5555321 22456789988775443333333332222 12223357777544 45655554321
Q ss_pred HHHHHHHHHhcCC--eeeeecCCCCCCCCceEEEEEeec
Q psy15838 326 TICLMYLLACLFT--SVDLFKPATSKEGNSEIYVICRDF 362 (399)
Q Consensus 326 t~~Ll~lL~~~F~--~V~v~KP~aSR~~sSE~YlVc~gf 362 (399)
.. .-|. .-.++=|.--.+.|+|.=++..+.
T Consensus 184 ~~-------~~~y~~dG~~~Lq~w~p~~StE~RL~v~~~ 215 (307)
T 3mag_A 184 WI-------KDFYIPHGNKMLQPFAPSYSAEMRLLSIYT 215 (307)
T ss_dssp CC-------CCEEEECCEEECCTTCCTTCCCEEEEEECC
T ss_pred CC-------cceEecCCCEEecccCCCCcceEEEEEecC
Confidence 10 0011 223455666677788887776543
No 248
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=51.30 E-value=15 Score=36.68 Aligned_cols=74 Identities=15% Similarity=0.103 Sum_probs=44.1
Q ss_pred CCcccEEEecCCCC-CCCCCchhHHHHHHHHHHHH-HHHHhccCCCCEEEEeEccCCC-CCHHHHHHHHHhcCCeeeeec
Q psy15838 268 ASHCFLVTADGSFD-CQGNPGEQEILVGKLHYREV-QIALSLLHNGGNLVIKIFTIFE-SDTICLMYLLACLFTSVDLFK 344 (399)
Q Consensus 268 ~~~vDLV~ADGs~d-~sg~~~~qe~~s~~L~~~el-~~Al~~Lr~GG~fVlK~F~~~e-~~t~~Ll~lL~~~F~~V~v~K 344 (399)
..++|+|+.|.... .++.+... ...|...+. ..+.+.|++||.||+-.=..+. .....+...|+..|..|.+.+
T Consensus 282 ~~~yDvIIvDl~D~~~s~~p~g~---a~~Lft~eFy~~~~~~L~p~GVlv~Q~~s~~~~~~~~~i~~tl~~vF~~v~~~~ 358 (381)
T 3c6k_A 282 GREFDYVINDLTAVPISTSPEED---STWEFLRLILDLSMKVLKQDGKYFTQGNCVNLTEALSLYEEQLGRLYCPVEFSK 358 (381)
T ss_dssp TCCEEEEEEECCSSCCCCC-------CHHHHHHHHHHHHHHTEEEEEEEEEEEEETTCHHHHHHHHHHHTTSSSCEEEEE
T ss_pred cCceeEEEECCCCCcccCcccCc---chHHHHHHHHHHHHHhcCCCCEEEEecCCCcchhHHHHHHHHHHHhCCcceEee
Confidence 35799999997532 23333221 123444443 4567899999999986422211 123456678999999887655
No 249
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=51.19 E-value=8.6 Score=34.72 Aligned_cols=19 Identities=16% Similarity=0.181 Sum_probs=16.2
Q ss_pred ceEEEeccCCChhHHHHHH
Q psy15838 166 FTSIHLCEAPGAFITSLNH 184 (399)
Q Consensus 166 ~~vlDLceaPGgFsqaln~ 184 (399)
.++||+|||.|+|+..+..
T Consensus 51 ~~vLDiGcG~G~~~~~la~ 69 (246)
T 2vdv_E 51 VTIADIGCGFGGLMIDLSP 69 (246)
T ss_dssp EEEEEETCTTSHHHHHHHH
T ss_pred CEEEEEcCCCCHHHHHHHH
Confidence 4899999999999986544
No 250
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=50.40 E-value=9.7 Score=33.77 Aligned_cols=19 Identities=5% Similarity=-0.062 Sum_probs=15.8
Q ss_pred ceEEEeccCCChhHHHHHH
Q psy15838 166 FTSIHLCEAPGAFITSLNH 184 (399)
Q Consensus 166 ~~vlDLceaPGgFsqaln~ 184 (399)
.+|||+|||+|.++..+..
T Consensus 50 ~~vLDiGcG~G~~~~~l~~ 68 (226)
T 3m33_A 50 TRVLEAGCGHGPDAARFGP 68 (226)
T ss_dssp CEEEEESCTTSHHHHHHGG
T ss_pred CeEEEeCCCCCHHHHHHHH
Confidence 4999999999999886543
No 251
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=50.04 E-value=13 Score=31.30 Aligned_cols=59 Identities=14% Similarity=-0.023 Sum_probs=34.0
Q ss_pred CcccEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHhccCCCCEEEEeEccC-------CCCCHHHHHHHHHhc-C
Q psy15838 269 SHCFLVTADGSFDCQGNPGEQEILVGKLHYREVQIALSLLHNGGNLVIKIFTI-------FESDTICLMYLLACL-F 337 (399)
Q Consensus 269 ~~vDLV~ADGs~d~sg~~~~qe~~s~~L~~~el~~Al~~Lr~GG~fVlK~F~~-------~e~~t~~Ll~lL~~~-F 337 (399)
..+|+|++-...... .++. ...+.-+.++|+|||.|++-.-.. +......+...|... |
T Consensus 62 ~~fD~V~~~~~l~~~-~~~~---------~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf 128 (176)
T 2ld4_A 62 SSFDIILSGLVPGST-TLHS---------AEILAEIARILRPGGCLFLKEPVETAVDNNSKVKTASKLCSALTLSGL 128 (176)
T ss_dssp SCEEEEEECCSTTCC-CCCC---------HHHHHHHHHHEEEEEEEEEEEEEESSSCSSSSSCCHHHHHHHHHHTTC
T ss_pred CCEeEEEECChhhhc-ccCH---------HHHHHHHHHHCCCCEEEEEEcccccccccccccCCHHHHHHHHHHCCC
Confidence 469999986554432 0122 223445667999999999943211 111245666666654 6
No 252
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=49.67 E-value=21 Score=33.59 Aligned_cols=18 Identities=17% Similarity=0.200 Sum_probs=16.2
Q ss_pred eEEEeccCCChhHHHHHH
Q psy15838 167 TSIHLCEAPGAFITSLNH 184 (399)
Q Consensus 167 ~vlDLceaPGgFsqaln~ 184 (399)
+|||+|||+|..+..+..
T Consensus 49 ~VLEIG~G~G~lt~~L~~ 66 (271)
T 3fut_A 49 PVFEVGPGLGALTRALLE 66 (271)
T ss_dssp CEEEECCTTSHHHHHHHH
T ss_pred eEEEEeCchHHHHHHHHH
Confidence 899999999999987655
No 253
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=47.57 E-value=10 Score=35.57 Aligned_cols=31 Identities=16% Similarity=0.170 Sum_probs=22.5
Q ss_pred eEEEeccCCChhHHHHHHhhhccCCCCccceeccccCC
Q psy15838 167 TSIHLCEAPGAFITSLNHYLKLHHPRMQWDWIANTLNP 204 (399)
Q Consensus 167 ~vlDLceaPGgFsqaln~yl~~~~~~~~w~~~a~sLnP 204 (399)
++||||||+|.++.++.+. . .++.+|++++|
T Consensus 126 ~vLDlG~GsG~~~~~la~~-~------~~~v~~vDis~ 156 (284)
T 1nv8_A 126 TVADIGTGSGAIGVSVAKF-S------DAIVFATDVSS 156 (284)
T ss_dssp EEEEESCTTSHHHHHHHHH-S------SCEEEEEESCH
T ss_pred EEEEEeCchhHHHHHHHHC-C------CCEEEEEECCH
Confidence 8999999999999876654 1 13456666644
No 254
>1vpt_A VP39; RNA CAP, poly(A) polymerase, methyltransferase; HET: SAM; 1.80A {Vaccinia virus} SCOP: c.66.1.25 PDB: 1vp3_A*
Probab=47.32 E-value=1.3e+02 Score=29.66 Aligned_cols=149 Identities=14% Similarity=0.140 Sum_probs=74.8
Q ss_pred eEEEeccCCChhHHHHHHhhhccCCCCccceeccccCCCcCCCCCCcEEeccccccccCccccCCCccccCCCChHHHHH
Q psy15838 167 TSIHLCEAPGAFITSLNHYLKLHHPRMQWDWIANTLNPHYEGNSFDEMISDDRLILGTHRKWYFGPDNTGNILVQNFVSH 246 (399)
Q Consensus 167 ~vlDLceaPGgFsqaln~yl~~~~~~~~w~~~a~sLnP~~e~n~~~~vI~dD~~~~~~~~~w~~G~d~tGDI~~~~~i~~ 246 (399)
.||..|+|||..+.+|.......+.. .+|+.++=.|+... ....+ -+...-++++.+.+..
T Consensus 78 ~VVYaGsAPG~HI~fL~~lF~~l~~~--lkwvLiDp~~f~~~-------------Le~~~----ni~li~~ffde~~i~~ 138 (348)
T 1vpt_A 78 TVVYIGSAPGTHIRYLRDHFYNLGVI--IKWMLIDGRHHDPI-------------LNGLR----DVTLVTRFVDEEYLRS 138 (348)
T ss_dssp EEEEESCSSCHHHHHHHHHHHHTTCC--CEEEEEESSCCCGG-------------GTTCT----TEEEEECCCCHHHHHH
T ss_pred eEEEeCcCCcchHHHHHHHhhhcCCc--eEEEEECCCchhhh-------------hcCCC----cEEeehhhcCHHHHHH
Confidence 99999999999999886644332222 35666654444210 00111 1123445666777777
Q ss_pred HHHhhhhhhccCCCCCCCCCCCCcccEEEecCCCCC-CCCCchhHHHHHHHHHHHHHHHHhccCCCCEEEEeEccCCCCC
Q psy15838 247 FKQHIGFLLIHDTSLAPHCTHASHCFLVTADGSFDC-QGNPGEQEILVGKLHYREVQIALSLLHNGGNLVIKIFTIFESD 325 (399)
Q Consensus 247 i~~~v~~~~~~~~~~~~~~~~~~~vDLV~ADGs~d~-sg~~~~qe~~s~~L~~~el~~Al~~Lr~GG~fVlK~F~~~e~~ 325 (399)
++..+. ..==|.+||--..- .+.++. +.+..... .-...+.+|+|--+ .+|.---+...
T Consensus 139 l~~~~~----------------~~~vLfISDIRS~~~~~Ep~~-~dll~Dy~--lQn~w~~iLkP~aS-mLKFRlPyp~~ 198 (348)
T 1vpt_A 139 IKKQLH----------------PSKIILISDVASAAGGNEPST-ADLLSNYA--LQNVMISILNPVAS-SLKWRCPFPDQ 198 (348)
T ss_dssp HHHHHT----------------TSCEEEEECCCC------CCH-HHHHHHHH--HHHHHHHHHCCSEE-EEEECCCCGGG
T ss_pred HHHHhc----------------CCCEEEEEecccCCCCCCccH-HHHHHHHH--HHHHHHHHhhhHHH-hccccCCCCCC
Confidence 777442 12335678875432 233322 22221111 22223466776544 45665555422
Q ss_pred HHHHHHHHHhcC--CeeeeecCCCCCCCCceEEEEEee
Q psy15838 326 TICLMYLLACLF--TSVDLFKPATSKEGNSEIYVICRD 361 (399)
Q Consensus 326 t~~Ll~lL~~~F--~~V~v~KP~aSR~~sSE~YlVc~g 361 (399)
.. .-| -.-.++=|.--++.|+|.=+|...
T Consensus 199 ~~-------~~~yi~dG~~~Lqvwap~tStE~RLvv~~ 229 (348)
T 1vpt_A 199 WI-------KDFYIPHGNKMLQPFAPSYSAEMRLLSIY 229 (348)
T ss_dssp CC-------CCEEEECCEEECCTTCCTTCCCEEEEEEC
T ss_pred CC-------CceEeeCCCEEecccCCCCcceEEEEEec
Confidence 10 101 012345566667777888777643
No 255
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=47.01 E-value=33 Score=33.12 Aligned_cols=34 Identities=12% Similarity=0.111 Sum_probs=24.3
Q ss_pred HHHHHHHhCCCCCCCCCCceEEEeccCCChhHHHHHH
Q psy15838 148 KFHEIVHSYNIVPQQENSFTSIHLCEAPGAFITSLNH 184 (399)
Q Consensus 148 KL~EId~~f~l~~~~~~~~~vlDLceaPGgFsqaln~ 184 (399)
-...+.+.+.-+.. ..++||+|||+|.++..+..
T Consensus 188 ~~~~~~~~~~~~~~---~~~vlDvG~G~G~~~~~l~~ 221 (364)
T 3p9c_A 188 ITKKLLELYHGFEG---LGTLVDVGGGVGATVAAIAA 221 (364)
T ss_dssp HHHHHHHHCCTTTT---CSEEEEETCTTSHHHHHHHH
T ss_pred HHHHHHHhcccccC---CCEEEEeCCCCCHHHHHHHH
Confidence 34567777763332 24999999999999987654
No 256
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=46.74 E-value=12 Score=33.95 Aligned_cols=31 Identities=16% Similarity=0.084 Sum_probs=23.1
Q ss_pred ceEEEeccCCChhHHHHHHhhhccCCCCccceeccccCC
Q psy15838 166 FTSIHLCEAPGAFITSLNHYLKLHHPRMQWDWIANTLNP 204 (399)
Q Consensus 166 ~~vlDLceaPGgFsqaln~yl~~~~~~~~w~~~a~sLnP 204 (399)
.+|||+|||+|+++..+.+.. .+.+|++++|
T Consensus 31 ~~VLDiG~G~G~~~~~l~~~~--------~~v~~id~~~ 61 (245)
T 1yub_A 31 DTVYEIGTGKGHLTTKLAKIS--------KQVTSIELDS 61 (245)
T ss_dssp EEEEECSCCCSSCSHHHHHHS--------SEEEESSSSC
T ss_pred CEEEEEeCCCCHHHHHHHHhC--------CeEEEEECCH
Confidence 489999999999998765531 2456777665
No 257
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=46.69 E-value=8.6 Score=38.47 Aligned_cols=23 Identities=22% Similarity=0.248 Sum_probs=19.7
Q ss_pred ceEEEeccCCChhHHHHHHhhhc
Q psy15838 166 FTSIHLCEAPGAFITSLNHYLKL 188 (399)
Q Consensus 166 ~~vlDLceaPGgFsqaln~yl~~ 188 (399)
.+|+|.|||+|+|..++.+++..
T Consensus 173 ~~VlDpacGsG~fl~~~~~~l~~ 195 (445)
T 2okc_A 173 ETVCDPACGTGGFLLTAYDYMKG 195 (445)
T ss_dssp CCEEETTCTTCHHHHHHHHHHHT
T ss_pred CEEeccCCCcchHHHHHHHHHHH
Confidence 48999999999999888777643
No 258
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=46.42 E-value=23 Score=34.08 Aligned_cols=87 Identities=17% Similarity=0.193 Sum_probs=53.3
Q ss_pred CCcccEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHhccCCCCEEEEeEccCC--CCCHHHHHHHHHhcCCeeeeecC
Q psy15838 268 ASHCFLVTADGSFDCQGNPGEQEILVGKLHYREVQIALSLLHNGGNLVIKIFTIF--ESDTICLMYLLACLFTSVDLFKP 345 (399)
Q Consensus 268 ~~~vDLV~ADGs~d~sg~~~~qe~~s~~L~~~el~~Al~~Lr~GG~fVlK~F~~~--e~~t~~Ll~lL~~~F~~V~v~KP 345 (399)
..++|+|+.|..-.. |.+.. +-..=. ...+.+.|++||.+|+-.=..+ ......++..|+..|..|..+-.
T Consensus 155 ~~~yDvIi~D~~dp~-~~~~~---L~t~eF---y~~~~~~L~p~Gv~v~q~~sp~~~~~~~~~~~~~l~~~F~~v~~~~~ 227 (294)
T 3o4f_A 155 SQTFDVIISDCTDPI-GPGES---LFTSAF---YEGCKRCLNPGGIFVAQNGVCFLQQEEAIDSHRKLSHYFSDVGFYQA 227 (294)
T ss_dssp SCCEEEEEESCCCCC-CTTCC---SSCCHH---HHHHHHTEEEEEEEEEEEEESSSCCHHHHHHHHHHHHHCSEEEEEEE
T ss_pred cccCCEEEEeCCCcC-CCchh---hcCHHH---HHHHHHHhCCCCEEEEecCCcccChHHHHHHHHHHHhhCCceeeeee
Confidence 457999999986432 32211 100011 1235679999999998642222 22356677889999999987754
Q ss_pred C-CCCCCCceEEEEEee
Q psy15838 346 A-TSKEGNSEIYVICRD 361 (399)
Q Consensus 346 ~-aSR~~sSE~YlVc~g 361 (399)
. -|-++..=.|++|..
T Consensus 228 ~vPty~~g~w~f~~as~ 244 (294)
T 3o4f_A 228 AIPTYYGGIMTFAWATD 244 (294)
T ss_dssp CCTTSSSSCEEEEEEES
T ss_pred eeccCCCcceeheeEEC
Confidence 3 244555556777764
No 259
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=46.03 E-value=21 Score=33.44 Aligned_cols=19 Identities=11% Similarity=0.114 Sum_probs=16.5
Q ss_pred ceEEEeccCCChhHHHHHH
Q psy15838 166 FTSIHLCEAPGAFITSLNH 184 (399)
Q Consensus 166 ~~vlDLceaPGgFsqaln~ 184 (399)
.+|||+|||+|.++..+..
T Consensus 30 ~~VLDiG~G~G~lt~~L~~ 48 (285)
T 1zq9_A 30 DVVLEVGPGTGNMTVKLLE 48 (285)
T ss_dssp CEEEEECCTTSTTHHHHHH
T ss_pred CEEEEEcCcccHHHHHHHh
Confidence 3899999999999997655
No 260
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=45.75 E-value=19 Score=32.80 Aligned_cols=19 Identities=16% Similarity=0.188 Sum_probs=16.4
Q ss_pred ceEEEeccCCChhHHHHHH
Q psy15838 166 FTSIHLCEAPGAFITSLNH 184 (399)
Q Consensus 166 ~~vlDLceaPGgFsqaln~ 184 (399)
.++||+|||+|+++..+..
T Consensus 32 ~~VLDiG~G~G~lt~~l~~ 50 (244)
T 1qam_A 32 DNIFEIGSGKGHFTLELVQ 50 (244)
T ss_dssp CEEEEECCTTSHHHHHHHH
T ss_pred CEEEEEeCCchHHHHHHHH
Confidence 3899999999999987655
No 261
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=44.15 E-value=12 Score=34.06 Aligned_cols=18 Identities=11% Similarity=0.169 Sum_probs=15.3
Q ss_pred ceEEEeccCCChhHHHHH
Q psy15838 166 FTSIHLCEAPGAFITSLN 183 (399)
Q Consensus 166 ~~vlDLceaPGgFsqaln 183 (399)
.++||||||.|.++..+.
T Consensus 48 ~~vLDiGcG~G~~~~~la 65 (235)
T 3ckk_A 48 VEFADIGCGYGGLLVELS 65 (235)
T ss_dssp EEEEEETCTTCHHHHHHG
T ss_pred CeEEEEccCCcHHHHHHH
Confidence 489999999999988543
No 262
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=44.09 E-value=13 Score=33.30 Aligned_cols=64 Identities=9% Similarity=-0.013 Sum_probs=33.5
Q ss_pred CCcccEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHhccCCCCEEEEeEccCCCCCHHHHHHHHHhc
Q psy15838 268 ASHCFLVTADGSFDCQGNPGEQEILVGKLHYREVQIALSLLHNGGNLVIKIFTIFESDTICLMYLLACL 336 (399)
Q Consensus 268 ~~~vDLV~ADGs~d~sg~~~~qe~~s~~L~~~el~~Al~~Lr~GG~fVlK~F~~~e~~t~~Ll~lL~~~ 336 (399)
.+.+|+|++...............+. ....+..+..+|+|||.|++-.=.. .....++..+...
T Consensus 103 ~~~~d~v~~~~~~p~~~~~~~~rr~~---~~~~l~~~~r~LkpGG~l~i~td~~--~~~~~~~~~~~~~ 166 (218)
T 3dxy_A 103 DNSLRMVQLFFPDPWHKARHNKRRIV---QVPFAELVKSKLQLGGVFHMATDWE--PYAEHMLEVMSSI 166 (218)
T ss_dssp TTCEEEEEEESCCCCCSGGGGGGSSC---SHHHHHHHHHHEEEEEEEEEEESCH--HHHHHHHHHHHTS
T ss_pred CCChheEEEeCCCCccchhhhhhhhh---hHHHHHHHHHHcCCCcEEEEEeCCH--HHHHHHHHHHHhC
Confidence 35799999865433221111110000 1123445668999999999876332 2234455556543
No 263
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=43.63 E-value=32 Score=30.19 Aligned_cols=32 Identities=13% Similarity=0.259 Sum_probs=20.6
Q ss_pred eEEEeccCCC-hhHHHHHHhhhccCCCCccceeccccCCC
Q psy15838 167 TSIHLCEAPG-AFITSLNHYLKLHHPRMQWDWIANTLNPH 205 (399)
Q Consensus 167 ~vlDLceaPG-gFsqaln~yl~~~~~~~~w~~~a~sLnP~ 205 (399)
++|++|+|+| --+. +|+.+ ...+..++++||.
T Consensus 38 rVlEVG~G~g~~vA~----~La~~---~g~~V~atDInp~ 70 (153)
T 2k4m_A 38 RVVEVGAGRFLYVSD----YIRKH---SKVDLVLTDIKPS 70 (153)
T ss_dssp EEEEETCTTCCHHHH----HHHHH---SCCEEEEECSSCS
T ss_pred cEEEEccCCChHHHH----HHHHh---CCCeEEEEECCcc
Confidence 9999999998 3444 34321 1234677777775
No 264
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=42.11 E-value=26 Score=35.39 Aligned_cols=20 Identities=15% Similarity=0.031 Sum_probs=16.7
Q ss_pred ceEEEeccCCChhHHHHHHh
Q psy15838 166 FTSIHLCEAPGAFITSLNHY 185 (399)
Q Consensus 166 ~~vlDLceaPGgFsqaln~y 185 (399)
.+|||||||.|..+..+...
T Consensus 244 ~~VLDLGCGsG~la~~LA~~ 263 (433)
T 1u2z_A 244 DTFMDLGSGVGNCVVQAALE 263 (433)
T ss_dssp CEEEEESCTTSHHHHHHHHH
T ss_pred CEEEEeCCCcCHHHHHHHHH
Confidence 49999999999998866553
No 265
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=40.43 E-value=14 Score=32.77 Aligned_cols=31 Identities=13% Similarity=0.044 Sum_probs=21.9
Q ss_pred ceEEEeccCCChhHHHHHHhhhccCCCCccceeccccCC
Q psy15838 166 FTSIHLCEAPGAFITSLNHYLKLHHPRMQWDWIANTLNP 204 (399)
Q Consensus 166 ~~vlDLceaPGgFsqaln~yl~~~~~~~~w~~~a~sLnP 204 (399)
.+|||+|||+|+++..+... ....+|++++|
T Consensus 80 ~~vLD~gcG~G~~~~~la~~--------~~~v~~vD~s~ 110 (241)
T 3gdh_A 80 DVVVDAFCGVGGNTIQFALT--------GMRVIAIDIDP 110 (241)
T ss_dssp SEEEETTCTTSHHHHHHHHT--------TCEEEEEESCH
T ss_pred CEEEECccccCHHHHHHHHc--------CCEEEEEECCH
Confidence 39999999999999866542 13455666654
No 266
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=39.27 E-value=25 Score=32.75 Aligned_cols=33 Identities=12% Similarity=0.158 Sum_probs=23.0
Q ss_pred HHHHHHhCCC-CCCCCCCceEEEeccCCChhHHHHHH
Q psy15838 149 FHEIVHSYNI-VPQQENSFTSIHLCEAPGAFITSLNH 184 (399)
Q Consensus 149 L~EId~~f~l-~~~~~~~~~vlDLceaPGgFsqaln~ 184 (399)
..+|.+.+++ +.+ ..++||+|||+|.++..+..
T Consensus 152 ~~~~~~~~~~~~~~---~~~vlDvG~G~G~~~~~l~~ 185 (335)
T 2r3s_A 152 AQLIAQLVNENKIE---PLKVLDISASHGLFGIAVAQ 185 (335)
T ss_dssp HHHHHHHHTC--CC---CSEEEEETCTTCHHHHHHHH
T ss_pred HHHHHHhcccccCC---CCEEEEECCCcCHHHHHHHH
Confidence 3466666665 122 24999999999999887654
No 267
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=38.36 E-value=23 Score=33.42 Aligned_cols=19 Identities=11% Similarity=0.058 Sum_probs=15.9
Q ss_pred ceEEEeccCCChhHHHHHH
Q psy15838 166 FTSIHLCEAPGAFITSLNH 184 (399)
Q Consensus 166 ~~vlDLceaPGgFsqaln~ 184 (399)
.+|||+|||+|+++..+..
T Consensus 44 ~~VLDiG~G~G~lt~~La~ 62 (299)
T 2h1r_A 44 DIVLEIGCGTGNLTVKLLP 62 (299)
T ss_dssp CEEEEECCTTSTTHHHHTT
T ss_pred CEEEEEcCcCcHHHHHHHh
Confidence 3999999999999986543
No 268
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=37.07 E-value=51 Score=35.76 Aligned_cols=44 Identities=7% Similarity=-0.059 Sum_probs=26.6
Q ss_pred CCcccEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHhccCCCCEEEEeEcc
Q psy15838 268 ASHCFLVTADGSFDCQGNPGEQEILVGKLHYREVQIALSLLHNGGNLVIKIFT 320 (399)
Q Consensus 268 ~~~vDLV~ADGs~d~sg~~~~qe~~s~~L~~~el~~Al~~Lr~GG~fVlK~F~ 320 (399)
..+||+|+|...-.+. +.+++-.+ +..+-+.|++||.+|=--++
T Consensus 493 ~ekVDIIVSElmGsfl-----~nEL~pe~----Ld~v~r~Lkp~Gi~iP~~~t 536 (745)
T 3ua3_A 493 FEQPDIIVSELLGSFG-----DNELSPEC----LDGVTGFLKPTTISIPQKYT 536 (745)
T ss_dssp CCCCSEEEECCCBTTB-----GGGSHHHH----HHTTGGGSCTTCEEESCEEE
T ss_pred CCcccEEEEecccccc-----chhccHHH----HHHHHHhCCCCcEEECCccE
Confidence 3689999999875432 12222222 23336899999987643333
No 269
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=36.31 E-value=30 Score=32.62 Aligned_cols=19 Identities=11% Similarity=0.116 Sum_probs=17.1
Q ss_pred eEEEeccCCChhHHHHHHh
Q psy15838 167 TSIHLCEAPGAFITSLNHY 185 (399)
Q Consensus 167 ~vlDLceaPGgFsqaln~y 185 (399)
+|||+|||+|..+..+...
T Consensus 45 ~VLEIG~G~G~lt~~La~~ 63 (279)
T 3uzu_A 45 RMVEIGPGLGALTGPVIAR 63 (279)
T ss_dssp EEEEECCTTSTTHHHHHHH
T ss_pred EEEEEccccHHHHHHHHHh
Confidence 9999999999999987664
No 270
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=34.19 E-value=41 Score=31.98 Aligned_cols=30 Identities=17% Similarity=0.176 Sum_probs=21.5
Q ss_pred HHHhCCCCCCCCCCceEEEeccCCChhHHHHHHh
Q psy15838 152 IVHSYNIVPQQENSFTSIHLCEAPGAFITSLNHY 185 (399)
Q Consensus 152 Id~~f~l~~~~~~~~~vlDLceaPGgFsqaln~y 185 (399)
|.+...+.+. .+|||+|||+|+++..+...
T Consensus 42 Iv~~l~~~~~----~~VLEIG~G~G~lT~~La~~ 71 (295)
T 3gru_A 42 AVESANLTKD----DVVLEIGLGKGILTEELAKN 71 (295)
T ss_dssp HHHHTTCCTT----CEEEEECCTTSHHHHHHHHH
T ss_pred HHHhcCCCCc----CEEEEECCCchHHHHHHHhc
Confidence 4444444332 38999999999999977653
No 271
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=32.99 E-value=24 Score=32.54 Aligned_cols=18 Identities=17% Similarity=0.254 Sum_probs=15.7
Q ss_pred eEEEeccCCChhHHHHHH
Q psy15838 167 TSIHLCEAPGAFITSLNH 184 (399)
Q Consensus 167 ~vlDLceaPGgFsqaln~ 184 (399)
++||+|||+|+.+..+..
T Consensus 34 ~VLDiG~G~G~lt~~L~~ 51 (249)
T 3ftd_A 34 TVVEVGGGTGNLTKVLLQ 51 (249)
T ss_dssp EEEEEESCHHHHHHHHTT
T ss_pred EEEEEcCchHHHHHHHHH
Confidence 899999999999986544
No 272
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=32.42 E-value=44 Score=30.18 Aligned_cols=33 Identities=18% Similarity=0.127 Sum_probs=23.2
Q ss_pred CcccEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHhccCCCCEEEEe
Q psy15838 269 SHCFLVTADGSFDCQGNPGEQEILVGKLHYREVQIALSLLHNGGNLVIK 317 (399)
Q Consensus 269 ~~vDLV~ADGs~d~sg~~~~qe~~s~~L~~~el~~Al~~Lr~GG~fVlK 317 (399)
+++|+|+-||... + .-+..++..|++||.+|+=
T Consensus 121 ~~fDlIfIDg~k~-------~---------~~~~~~l~~l~~GG~Iv~D 153 (202)
T 3cvo_A 121 RHPDVVLVDGRFR-------V---------GCALATAFSITRPVTLLFD 153 (202)
T ss_dssp CCCSEEEECSSSH-------H---------HHHHHHHHHCSSCEEEEET
T ss_pred CCCCEEEEeCCCc-------h---------hHHHHHHHhcCCCeEEEEe
Confidence 6799999999632 1 1122367899999998654
No 273
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=32.34 E-value=39 Score=32.10 Aligned_cols=32 Identities=6% Similarity=0.160 Sum_probs=22.5
Q ss_pred HHHHHhCCCCCCCCCCceEEEeccCCChhHHHHHHh
Q psy15838 150 HEIVHSYNIVPQQENSFTSIHLCEAPGAFITSLNHY 185 (399)
Q Consensus 150 ~EId~~f~l~~~~~~~~~vlDLceaPGgFsqaln~y 185 (399)
.+|.+.+++-+ ..++||+|||.|.++..+...
T Consensus 172 ~~~~~~~~~~~----~~~vlDvG~G~G~~~~~l~~~ 203 (374)
T 1qzz_A 172 EAPADAYDWSA----VRHVLDVGGGNGGMLAAIALR 203 (374)
T ss_dssp HHHHHTSCCTT----CCEEEEETCTTSHHHHHHHHH
T ss_pred HHHHHhCCCCC----CCEEEEECCCcCHHHHHHHHH
Confidence 34566665432 249999999999999876553
No 274
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=32.26 E-value=41 Score=31.84 Aligned_cols=30 Identities=10% Similarity=0.216 Sum_probs=21.7
Q ss_pred HHHHhCCCCCCCCCCceEEEeccCCChhHHHHHH
Q psy15838 151 EIVHSYNIVPQQENSFTSIHLCEAPGAFITSLNH 184 (399)
Q Consensus 151 EId~~f~l~~~~~~~~~vlDLceaPGgFsqaln~ 184 (399)
.|.+.+++-+. .++||+|||.|.++..+..
T Consensus 174 ~l~~~~~~~~~----~~vLDvG~G~G~~~~~l~~ 203 (360)
T 1tw3_A 174 APAAAYDWTNV----RHVLDVGGGKGGFAAAIAR 203 (360)
T ss_dssp HHHHHSCCTTC----SEEEEETCTTSHHHHHHHH
T ss_pred HHHHhCCCccC----cEEEEeCCcCcHHHHHHHH
Confidence 45566654332 4999999999999986654
No 275
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=32.07 E-value=26 Score=30.69 Aligned_cols=35 Identities=23% Similarity=0.218 Sum_probs=25.6
Q ss_pred CcccEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHhccCCCCEEEEeEcc
Q psy15838 269 SHCFLVTADGSFDCQGNPGEQEILVGKLHYREVQIALSLLHNGGNLVIKIFT 320 (399)
Q Consensus 269 ~~vDLV~ADGs~d~sg~~~~qe~~s~~L~~~el~~Al~~Lr~GG~fVlK~F~ 320 (399)
.++|+|++++...-. +..+...|++||.+|+=+-.
T Consensus 161 ~~fD~I~~~~~~~~~-----------------~~~~~~~LkpgG~lv~~~~~ 195 (227)
T 2pbf_A 161 GLFDAIHVGASASEL-----------------PEILVDLLAENGKLIIPIEE 195 (227)
T ss_dssp CCEEEEEECSBBSSC-----------------CHHHHHHEEEEEEEEEEEEE
T ss_pred CCcCEEEECCchHHH-----------------HHHHHHhcCCCcEEEEEEcc
Confidence 469999999876411 13346789999999987654
No 276
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=31.62 E-value=25 Score=30.98 Aligned_cols=21 Identities=10% Similarity=0.289 Sum_probs=17.5
Q ss_pred ceEEEeccCCChhHHHHHHhh
Q psy15838 166 FTSIHLCEAPGAFITSLNHYL 186 (399)
Q Consensus 166 ~~vlDLceaPGgFsqaln~yl 186 (399)
.++||+|||+|.++..+.+..
T Consensus 86 ~~VLdiG~G~G~~~~~la~~~ 106 (227)
T 1r18_A 86 ARILDVGSGSGYLTACFYRYI 106 (227)
T ss_dssp CEEEEESCTTSHHHHHHHHHH
T ss_pred CEEEEECCCccHHHHHHHHhc
Confidence 399999999999998776643
No 277
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=31.35 E-value=41 Score=31.06 Aligned_cols=19 Identities=16% Similarity=-0.064 Sum_probs=15.7
Q ss_pred ceEEEeccCCChhHHHHHH
Q psy15838 166 FTSIHLCEAPGAFITSLNH 184 (399)
Q Consensus 166 ~~vlDLceaPGgFsqaln~ 184 (399)
.+|||||||.|.++.++..
T Consensus 81 ~~vLDlG~G~G~~~~~~a~ 99 (281)
T 3bzb_A 81 KTVCELGAGAGLVSIVAFL 99 (281)
T ss_dssp CEEEETTCTTSHHHHHHHH
T ss_pred CeEEEecccccHHHHHHHH
Confidence 3899999999998876544
No 278
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=30.74 E-value=34 Score=36.41 Aligned_cols=39 Identities=10% Similarity=0.101 Sum_probs=25.5
Q ss_pred CCcccEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHhccCCCCEEE
Q psy15838 268 ASHCFLVTADGSFDCQGNPGEQEILVGKLHYREVQIALSLLHNGGNLV 315 (399)
Q Consensus 268 ~~~vDLV~ADGs~d~sg~~~~qe~~s~~L~~~el~~Al~~Lr~GG~fV 315 (399)
..+||+|+|.-.-.+- .-|. + + ..+..+-+.|+|||.++
T Consensus 426 PEKVDIIVSEwMG~fL----l~E~-m--l--evL~Ardr~LKPgGimi 464 (637)
T 4gqb_A 426 PEKADIIVSELLGSFA----DNEL-S--P--ECLDGAQHFLKDDGVSI 464 (637)
T ss_dssp SSCEEEEECCCCBTTB----GGGC-H--H--HHHHHHGGGEEEEEEEE
T ss_pred CcccCEEEEEcCcccc----cccC-C--H--HHHHHHHHhcCCCcEEc
Confidence 3579999999764432 2232 2 1 23566778999999774
No 279
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=30.66 E-value=37 Score=31.49 Aligned_cols=18 Identities=22% Similarity=0.242 Sum_probs=15.7
Q ss_pred eEEEeccCCChhHHHHHH
Q psy15838 167 TSIHLCEAPGAFITSLNH 184 (399)
Q Consensus 167 ~vlDLceaPGgFsqaln~ 184 (399)
++||+|||+|..+..+..
T Consensus 32 ~VLEIG~G~G~lt~~La~ 49 (255)
T 3tqs_A 32 TLVEIGPGRGALTDYLLT 49 (255)
T ss_dssp EEEEECCTTTTTHHHHTT
T ss_pred EEEEEcccccHHHHHHHH
Confidence 899999999999986544
No 280
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=30.23 E-value=26 Score=32.95 Aligned_cols=19 Identities=16% Similarity=0.277 Sum_probs=16.6
Q ss_pred ceEEEeccCCChhHHHHHH
Q psy15838 166 FTSIHLCEAPGAFITSLNH 184 (399)
Q Consensus 166 ~~vlDLceaPGgFsqaln~ 184 (399)
++||||.||.||++..+..
T Consensus 1 mkvidLFsG~GG~~~G~~~ 19 (331)
T 3ubt_Y 1 MNLISLFSGAGGLDLGFQK 19 (331)
T ss_dssp CEEEEESCTTCHHHHHHHH
T ss_pred CeEEEeCcCccHHHHHHHH
Confidence 5899999999999998654
No 281
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=29.43 E-value=28 Score=31.29 Aligned_cols=42 Identities=14% Similarity=0.026 Sum_probs=27.1
Q ss_pred CcccEEEecCCCC-CCCCCchhHHHHHHHHHHHHHHHHhccCCCCEEEEeEccC
Q psy15838 269 SHCFLVTADGSFD-CQGNPGEQEILVGKLHYREVQIALSLLHNGGNLVIKIFTI 321 (399)
Q Consensus 269 ~~vDLV~ADGs~d-~sg~~~~qe~~s~~L~~~el~~Al~~Lr~GG~fVlK~F~~ 321 (399)
+.+|+|++.+... ... + ....+.-+..+|+|||.+|+=++..
T Consensus 113 ~~fD~v~~~~~~~~~~~--~---------~~~~l~~~~~~LkpgG~l~~~~~~~ 155 (260)
T 2avn_A 113 GAFEAVLALGDVLSYVE--N---------KDKAFSEIRRVLVPDGLLIATVDNF 155 (260)
T ss_dssp TCEEEEEECSSHHHHCS--C---------HHHHHHHHHHHEEEEEEEEEEEEBH
T ss_pred CCEEEEEEcchhhhccc--c---------HHHHHHHHHHHcCCCeEEEEEeCCh
Confidence 5699999865321 111 1 1233445677999999999987764
No 282
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=28.69 E-value=15 Score=38.07 Aligned_cols=21 Identities=14% Similarity=0.362 Sum_probs=18.4
Q ss_pred eEEEeccCCChhHHHHHHhhh
Q psy15838 167 TSIHLCEAPGAFITSLNHYLK 187 (399)
Q Consensus 167 ~vlDLceaPGgFsqaln~yl~ 187 (399)
+|+|.|||.|||.-++.+++.
T Consensus 247 ~VlDPaCGSG~fLi~a~~~l~ 267 (544)
T 3khk_A 247 RVYDPAMGSGGFFVSSDKFIE 267 (544)
T ss_dssp EEEESSCTTCHHHHHHHHHHH
T ss_pred eEeCcccCcCcHHHHHHHHHH
Confidence 899999999999888777664
No 283
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=28.23 E-value=26 Score=32.98 Aligned_cols=39 Identities=10% Similarity=-0.011 Sum_probs=24.3
Q ss_pred CcccEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHhccCCCCEEEE
Q psy15838 269 SHCFLVTADGSFDCQGNPGEQEILVGKLHYREVQIALSLLHNGGNLVI 316 (399)
Q Consensus 269 ~~vDLV~ADGs~d~sg~~~~qe~~s~~L~~~el~~Al~~Lr~GG~fVl 316 (399)
+.+|+|+|=....- .........+.-....|+|||.|++
T Consensus 212 ~~fDlI~crnvliy---------f~~~~~~~vl~~~~~~L~pgG~L~l 250 (274)
T 1af7_A 212 GPFDAIFCRNVMIY---------FDKTTQEDILRRFVPLLKPDGLLFA 250 (274)
T ss_dssp CCEEEEEECSSGGG---------SCHHHHHHHHHHHGGGEEEEEEEEE
T ss_pred CCeeEEEECCchHh---------CCHHHHHHHHHHHHHHhCCCcEEEE
Confidence 57999999322110 0111234445567789999999987
No 284
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=27.20 E-value=30 Score=31.40 Aligned_cols=15 Identities=20% Similarity=0.239 Sum_probs=12.8
Q ss_pred ceEEEeccCCChhHH
Q psy15838 166 FTSIHLCEAPGAFIT 180 (399)
Q Consensus 166 ~~vlDLceaPGgFsq 180 (399)
.++||||||||.++.
T Consensus 57 ~~vLDiGCG~G~~~~ 71 (263)
T 2a14_A 57 DTLIDIGSGPTIYQV 71 (263)
T ss_dssp EEEEESSCTTCCGGG
T ss_pred ceEEEeCCCccHHHH
Confidence 589999999987654
No 285
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=26.40 E-value=66 Score=30.62 Aligned_cols=51 Identities=18% Similarity=0.154 Sum_probs=32.2
Q ss_pred CCcccEEEecCCCCCCC-----CCchhHHHHHHHHHHHHHHHHhccCCCCEEEEeEcc
Q psy15838 268 ASHCFLVTADGSFDCQG-----NPGEQEILVGKLHYREVQIALSLLHNGGNLVIKIFT 320 (399)
Q Consensus 268 ~~~vDLV~ADGs~d~sg-----~~~~qe~~s~~L~~~el~~Al~~Lr~GG~fVlK~F~ 320 (399)
.++||||++|==..... +...++. .......+..+..+|++||.+++=+=+
T Consensus 31 ~~svDlI~tDPPY~~~~~~~y~~~~~~~~--~~~l~~~l~~~~rvLk~~G~i~i~~~d 86 (323)
T 1boo_A 31 EESISLVMTSPPFALQRKKEYGNLEQHEY--VDWFLSFAKVVNKKLKPDGSFVVDFGG 86 (323)
T ss_dssp SSCEEEEEECCCCSSSCSCSSCSCHHHHH--HHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred CCCeeEEEECCCCCCCcccccCCcCHHHH--HHHHHHHHHHHHHHCcCCcEEEEEECC
Confidence 35799999995544331 1122222 234455566678999999999986544
No 286
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=25.43 E-value=52 Score=30.33 Aligned_cols=16 Identities=6% Similarity=0.021 Sum_probs=14.5
Q ss_pred eEEEeccCCChhHHHHH
Q psy15838 167 TSIHLCEAPGAFITSLN 183 (399)
Q Consensus 167 ~vlDLceaPGgFsqaln 183 (399)
+|||+|||+|..+. +.
T Consensus 24 ~VLEIG~G~G~lt~-l~ 39 (252)
T 1qyr_A 24 AMVEIGPGLAALTE-PV 39 (252)
T ss_dssp CEEEECCTTTTTHH-HH
T ss_pred EEEEECCCCcHHHH-hh
Confidence 89999999999998 54
No 287
>2kfe_A Meucin-24; alpha-helix, antimicrobial protein; NMR {Synthetic}
Probab=25.01 E-value=46 Score=20.68 Aligned_cols=17 Identities=41% Similarity=0.561 Sum_probs=14.7
Q ss_pred hHHHHHHHHHHHhhhcC
Q psy15838 93 NFQALKEKLNDVKSNLN 109 (399)
Q Consensus 93 ~l~~lk~~Ln~~K~~l~ 109 (399)
-++.+|+.|+++|+++-
T Consensus 6 i~~kiK~kl~~akdK~k 22 (26)
T 2kfe_A 6 FMSNLKEKLSGVKEKMK 22 (26)
T ss_dssp HHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 47889999999999875
No 288
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=24.56 E-value=4.2e+02 Score=25.66 Aligned_cols=20 Identities=5% Similarity=0.002 Sum_probs=15.9
Q ss_pred ceEEEeccCCChhHHHHHHh
Q psy15838 166 FTSIHLCEAPGAFITSLNHY 185 (399)
Q Consensus 166 ~~vlDLceaPGgFsqaln~y 185 (399)
..++|++||+|.|.-.+...
T Consensus 197 ~~vlDp~CGSGt~lieaa~~ 216 (385)
T 3ldu_A 197 RVLVDPMCGSGTILIEAAMI 216 (385)
T ss_dssp SCEEETTCTTCHHHHHHHHH
T ss_pred CeEEEcCCCCCHHHHHHHHH
Confidence 48999999999997655443
No 289
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=23.84 E-value=39 Score=34.80 Aligned_cols=24 Identities=13% Similarity=0.152 Sum_probs=20.6
Q ss_pred ceEEEeccCCChhHHHHHHhhhcc
Q psy15838 166 FTSIHLCEAPGAFITSLNHYLKLH 189 (399)
Q Consensus 166 ~~vlDLceaPGgFsqaln~yl~~~ 189 (399)
.+|+|-|||.|||..++.+|+..+
T Consensus 219 ~~I~DPacGsGgfL~~a~~~l~~~ 242 (530)
T 3ufb_A 219 ESVLDPACGTGGFLVEAFEHLERQ 242 (530)
T ss_dssp CCEEETTCTTTHHHHHHHHHHHTT
T ss_pred CEEEeCCCCcchHHHHHHHHHHHh
Confidence 389999999999998888887654
No 290
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=21.89 E-value=1.6e+02 Score=26.98 Aligned_cols=61 Identities=15% Similarity=0.066 Sum_probs=32.3
Q ss_pred CcccEEEe-cCCCCCCCCCchhHHHHHHHHHHHHHHHHhccC---C--CCEEEEeEccCCC----CCHHHHHHHHHhc--
Q psy15838 269 SHCFLVTA-DGSFDCQGNPGEQEILVGKLHYREVQIALSLLH---N--GGNLVIKIFTIFE----SDTICLMYLLACL-- 336 (399)
Q Consensus 269 ~~vDLV~A-DGs~d~sg~~~~qe~~s~~L~~~el~~Al~~Lr---~--GG~fVlK~F~~~e----~~t~~Ll~lL~~~-- 336 (399)
.++|+|++ |.-... .. ....+..+..+|+ + ||.+++ +|.... .....++..+...
T Consensus 162 ~~fD~Ii~~dvl~~~----~~--------~~~ll~~l~~~Lk~~~p~~gG~l~v-~~~~~~~~~~~~~~~~~~~l~~~G~ 228 (281)
T 3bzb_A 162 QRFQVVLLADLLSFH----QA--------HDALLRSVKMLLALPANDPTAVALV-TFTHHRPHLAERDLAFFRLVNADGA 228 (281)
T ss_dssp SSBSEEEEESCCSCG----GG--------HHHHHHHHHHHBCCTTTCTTCEEEE-EECC--------CTHHHHHHHHSTT
T ss_pred CCCCEEEEeCcccCh----HH--------HHHHHHHHHHHhcccCCCCCCEEEE-EEEeeecccchhHHHHHHHHHhcCC
Confidence 46999987 554431 11 1122334456788 9 998766 333321 1235566666654
Q ss_pred CCeeee
Q psy15838 337 FTSVDL 342 (399)
Q Consensus 337 F~~V~v 342 (399)
|+-+.+
T Consensus 229 f~v~~~ 234 (281)
T 3bzb_A 229 LIAEPW 234 (281)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 665555
No 291
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=21.85 E-value=67 Score=30.78 Aligned_cols=16 Identities=13% Similarity=-0.041 Sum_probs=13.1
Q ss_pred CceEEEeccCCChhHH
Q psy15838 165 SFTSIHLCEAPGAFIT 180 (399)
Q Consensus 165 ~~~vlDLceaPGgFsq 180 (399)
.-+|+|||||.|=++-
T Consensus 133 p~~VLDLGCG~GpLAl 148 (281)
T 3lcv_B 133 PNTLRDLACGLNPLAA 148 (281)
T ss_dssp CSEEEETTCTTGGGCC
T ss_pred CceeeeeccCccHHHH
Confidence 4599999999987664
No 292
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=21.78 E-value=47 Score=30.33 Aligned_cols=68 Identities=13% Similarity=0.054 Sum_probs=38.4
Q ss_pred CcccEEEecCCCCCCCCCchhHHHHHHHHHHHHHHHHhccCCCCEEEEeEcc-------------CCCCCHHHHHHHHHh
Q psy15838 269 SHCFLVTADGSFDCQGNPGEQEILVGKLHYREVQIALSLLHNGGNLVIKIFT-------------IFESDTICLMYLLAC 335 (399)
Q Consensus 269 ~~vDLV~ADGs~d~sg~~~~qe~~s~~L~~~el~~Al~~Lr~GG~fVlK~F~-------------~~e~~t~~Ll~lL~~ 335 (399)
+.||+|++=.....-.. +. .-....+.-+.++|+|||.||+-... ........+..+|..
T Consensus 173 ~~fD~V~~~~~l~~~~~-~~------~~~~~~l~~~~r~LkpGG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 245 (289)
T 2g72_A 173 LPADALVSAFCLEAVSP-DL------ASFQRALDHITTLLRPGGHLLLIGALEESWYLAGEARLTVVPVSEEEVREALVR 245 (289)
T ss_dssp SSEEEEEEESCHHHHCS-SH------HHHHHHHHHHHTTEEEEEEEEEEEEESCCEEEETTEEEECCCCCHHHHHHHHHH
T ss_pred CCCCEEEehhhhhhhcC-CH------HHHHHHHHHHHHhcCCCCEEEEEEecCcceEEcCCeeeeeccCCHHHHHHHHHH
Confidence 45999998654321000 00 11234456677899999999984211 111134566677766
Q ss_pred c-CCeeeee
Q psy15838 336 L-FTSVDLF 343 (399)
Q Consensus 336 ~-F~~V~v~ 343 (399)
. |+.+.+.
T Consensus 246 aGf~~~~~~ 254 (289)
T 2g72_A 246 SGYKVRDLR 254 (289)
T ss_dssp TTEEEEEEE
T ss_pred cCCeEEEee
Confidence 5 7765544
No 293
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=21.39 E-value=45 Score=32.78 Aligned_cols=19 Identities=11% Similarity=-0.078 Sum_probs=15.4
Q ss_pred ceEEEeccCCChhHHHHHH
Q psy15838 166 FTSIHLCEAPGAFITSLNH 184 (399)
Q Consensus 166 ~~vlDLceaPGgFsqaln~ 184 (399)
.+|||||+|+|+++-.+..
T Consensus 49 ~~VLDl~aGtG~~~l~~a~ 67 (378)
T 2dul_A 49 KIVLDALSATGIRGIRFAL 67 (378)
T ss_dssp SEEEESSCTTSHHHHHHHH
T ss_pred CEEEECCCchhHHHHHHHH
Confidence 3899999999999875443
No 294
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=20.58 E-value=34 Score=35.51 Aligned_cols=76 Identities=9% Similarity=-0.069 Sum_probs=39.6
Q ss_pred HHHHHHHhccC-CCCEEEEeEccCC--CCC-HHHHHHHHHhcCC--eeeeecCCCCCCCCceEEEEEeeccCCccccccc
Q psy15838 299 REVQIALSLLH-NGGNLVIKIFTIF--ESD-TICLMYLLACLFT--SVDLFKPATSKEGNSEIYVICRDFHSVCSQVWIY 372 (399)
Q Consensus 299 ~el~~Al~~Lr-~GG~fVlK~F~~~--e~~-t~~Ll~lL~~~F~--~V~v~KP~aSR~~sSE~YlVc~gf~g~~~~~~~~ 372 (399)
.-+..++..|+ +||.+++=+-.+. ... ...+...|...+. .|.-.-+..-...+-...|+-..... ...+.+|
T Consensus 338 ~Fl~~~l~~Lk~~gGr~a~VlP~g~Lf~~~~~~~iRk~Lle~~~l~~II~LP~~lF~~t~i~t~Ilvl~K~k-~~~~V~f 416 (542)
T 3lkd_A 338 AFLLHGYYHLKQDNGVMAIVLPHGVLFRGNAEGTIRKALLEEGAIDTVIGLPANIFFNTSIPTTVIILKKNR-TNRDVYF 416 (542)
T ss_dssp HHHHHHHHTBCTTTCEEEEEEETHHHHCCTHHHHHHHHHHHTTCEEEEEECCSSCSSSCCCCEEEEEECSSC-SBCCEEE
T ss_pred HHHHHHHHHhCCCceeEEEEecchHhhCCchhHHHHHHHHhCCceeEEEEccccccCCCCCcEEEEEEecCC-CCceEEE
Confidence 45667889999 9998866665542 222 3456665544444 23333233333344455555544433 2234444
Q ss_pred ccc
Q psy15838 373 LNL 375 (399)
Q Consensus 373 ~~~ 375 (399)
-+.
T Consensus 417 iDa 419 (542)
T 3lkd_A 417 IDA 419 (542)
T ss_dssp EEC
T ss_pred EEC
Confidence 443
No 295
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=20.34 E-value=57 Score=31.45 Aligned_cols=21 Identities=14% Similarity=0.259 Sum_probs=18.0
Q ss_pred CCceEEEeccCCChhHHHHHH
Q psy15838 164 NSFTSIHLCEAPGAFITSLNH 184 (399)
Q Consensus 164 ~~~~vlDLceaPGgFsqaln~ 184 (399)
..++++||+||.||++.++..
T Consensus 9 ~~~~vidLFaG~GG~~~G~~~ 29 (327)
T 3qv2_A 9 KQVNVIEFFSGIGGLRSSYER 29 (327)
T ss_dssp CCEEEEEETCTTTHHHHHHHH
T ss_pred CCCEEEEECCChhHHHHHHHH
Confidence 358999999999999987654
No 296
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=20.00 E-value=56 Score=31.66 Aligned_cols=19 Identities=11% Similarity=0.100 Sum_probs=15.8
Q ss_pred ceEEEeccCCChhHHHHHH
Q psy15838 166 FTSIHLCEAPGAFITSLNH 184 (399)
Q Consensus 166 ~~vlDLceaPGgFsqaln~ 184 (399)
.++||+|||+|+++..+..
T Consensus 219 ~~vLD~gCGsG~~~i~~a~ 237 (373)
T 3tm4_A 219 GSVLDPMCGSGTILIELAL 237 (373)
T ss_dssp CCEEETTCTTCHHHHHHHH
T ss_pred CEEEEccCcCcHHHHHHHH
Confidence 3899999999999876544
Done!