BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy15840
(161 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P48987|ATO_DROME Protein atonal OS=Drosophila melanogaster GN=ato PE=2 SV=2
Length = 312
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 48/82 (58%), Positives = 59/82 (71%), Gaps = 5/82 (6%)
Query: 72 ASSNPRRRRRNSAPSGSVPPPQVMKKRRLAANARERRRMSGLNEAFDRLREVIPCIGIEH 131
A+ ++RR G P V +KRRLAANARERRRM LN+AFDRLR+ +PC+G +
Sbjct: 235 AAGGSGKKRR-----GKQITPVVKRKRRLAANARERRRMQNLNQAFDRLRQYLPCLGNDR 289
Query: 132 KLSKFETLQMAQTYIHSLRDLL 153
+LSK ETLQMAQTYI +L DLL
Sbjct: 290 QLSKHETLQMAQTYISALGDLL 311
>sp|P48985|ATOH1_MOUSE Protein atonal homolog 1 OS=Mus musculus GN=Atoh1 PE=2 SV=1
Length = 351
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 44/66 (66%), Positives = 52/66 (78%)
Query: 94 VMKKRRLAANARERRRMSGLNEAFDRLREVIPCIGIEHKLSKFETLQMAQTYIHSLRDLL 153
V K+RRLAANARERRRM GLN AFD+LR VIP + KLSK+ETLQMAQ YI++L +LL
Sbjct: 153 VQKQRRLAANARERRRMHGLNHAFDQLRNVIPSFNNDKKLSKYETLQMAQIYINALSELL 212
Query: 154 TSANSG 159
+ N G
Sbjct: 213 QTPNVG 218
>sp|Q5IS79|ATOH1_PANTR Protein atonal homolog 1 OS=Pan troglodytes GN=ATOH1 PE=2 SV=1
Length = 356
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 52/66 (78%)
Query: 94 VMKKRRLAANARERRRMSGLNEAFDRLREVIPCIGIEHKLSKFETLQMAQTYIHSLRDLL 153
V K+RRLAANARERRRM GLN AFD+LR VIP + KLSK+ETLQMAQ YI++L +LL
Sbjct: 158 VQKQRRLAANARERRRMHGLNHAFDQLRNVIPSFNNDKKLSKYETLQMAQIYINALSELL 217
Query: 154 TSANSG 159
+ + G
Sbjct: 218 QTPSGG 223
>sp|Q92858|ATOH1_HUMAN Protein atonal homolog 1 OS=Homo sapiens GN=ATOH1 PE=2 SV=1
Length = 354
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 52/66 (78%)
Query: 94 VMKKRRLAANARERRRMSGLNEAFDRLREVIPCIGIEHKLSKFETLQMAQTYIHSLRDLL 153
V K+RRLAANARERRRM GLN AFD+LR VIP + KLSK+ETLQMAQ YI++L +LL
Sbjct: 156 VQKQRRLAANARERRRMHGLNHAFDQLRNVIPSFNNDKKLSKYETLQMAQIYINALSELL 215
Query: 154 TSANSG 159
+ + G
Sbjct: 216 QTPSGG 221
>sp|Q9Y0A7|AMOS_DROME Basic helix-loop-helix transcription factor amos OS=Drosophila
melanogaster GN=amos PE=1 SV=2
Length = 198
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 41/62 (66%), Positives = 53/62 (85%)
Query: 93 QVMKKRRLAANARERRRMSGLNEAFDRLREVIPCIGIEHKLSKFETLQMAQTYIHSLRDL 152
+V+KKRRLAANARERRRM+ LN+AFD+LR+V+P +G + +LSK+ETLQMAQ YI L L
Sbjct: 134 EVLKKRRLAANARERRRMNSLNDAFDKLRDVVPSLGHDRRLSKYETLQMAQAYIGDLVTL 193
Query: 153 LT 154
L+
Sbjct: 194 LS 195
>sp|O57598|ATOH7_CHICK Protein atonal homolog 7 OS=Gallus gallus GN=ATOH7 PE=1 SV=2
Length = 151
Score = 83.2 bits (204), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 41/60 (68%), Positives = 48/60 (80%)
Query: 97 KRRLAANARERRRMSGLNEAFDRLREVIPCIGIEHKLSKFETLQMAQTYIHSLRDLLTSA 156
KRRLAANARERRRM GLN AFDRLR+V+P G + KLSK+ETLQMA +YI +L +L A
Sbjct: 39 KRRLAANARERRRMQGLNTAFDRLRKVVPQWGQDKKLSKYETLQMALSYIMALTRILAEA 98
>sp|O13126|ATO7B_XENLA Protein atonal homolog 7-B OS=Xenopus laevis GN=atoh7-b PE=1 SV=1
Length = 138
Score = 82.0 bits (201), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/60 (68%), Positives = 48/60 (80%)
Query: 97 KRRLAANARERRRMSGLNEAFDRLREVIPCIGIEHKLSKFETLQMAQTYIHSLRDLLTSA 156
KRRLAANARERRRM GLN AFD LR+V+P G + KLSK+ETLQMA +YI +L +LT A
Sbjct: 33 KRRLAANARERRRMQGLNTAFDSLRKVVPQWGEDKKLSKYETLQMALSYIMALSRILTEA 92
>sp|Q8AW52|ATOH7_DANRE Protein atonal homolog 7 OS=Danio rerio GN=atoh7 PE=1 SV=1
Length = 134
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 38/61 (62%), Positives = 49/61 (80%)
Query: 97 KRRLAANARERRRMSGLNEAFDRLREVIPCIGIEHKLSKFETLQMAQTYIHSLRDLLTSA 156
+RR+AANARER+RM GLN AFDRLR+V+P G + KLSK+ETLQMA +YI +L +L+ A
Sbjct: 28 RRRMAANARERKRMQGLNTAFDRLRKVVPQWGQDKKLSKYETLQMALSYIMALNRILSDA 87
Query: 157 N 157
Sbjct: 88 G 88
>sp|Q10574|LIN32_CAEEL Protein lin-32 OS=Caenorhabditis elegans GN=lin-32 PE=1 SV=2
Length = 142
Score = 80.1 bits (196), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 40/65 (61%), Positives = 47/65 (72%)
Query: 89 VPPPQVMKKRRLAANARERRRMSGLNEAFDRLREVIPCIGIEHKLSKFETLQMAQTYIHS 148
P PQ+++ RR AAN RERRRM+ LN A+D LREV+P I KLSKFETLQMAQ YI
Sbjct: 64 TPSPQLLRMRRSAANERERRRMNTLNVAYDELREVLPEIDSGKKLSKFETLQMAQKYIEC 123
Query: 149 LRDLL 153
L +L
Sbjct: 124 LSQIL 128
>sp|O13125|ATO7A_XENLA Protein atonal homolog 7-A OS=Xenopus laevis GN=atoh7-a PE=1 SV=1
Length = 138
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/60 (65%), Positives = 48/60 (80%)
Query: 97 KRRLAANARERRRMSGLNEAFDRLREVIPCIGIEHKLSKFETLQMAQTYIHSLRDLLTSA 156
KRRLAANARERRRM GLN AFD LR+V+P G + +LSK+ETLQMA +YI +L +L+ A
Sbjct: 33 KRRLAANARERRRMQGLNTAFDSLRKVVPQWGEDKQLSKYETLQMALSYIMALSRILSEA 92
>sp|Q91616|NDF1_XENLA Neurogenic differentiation factor 1 OS=Xenopus laevis GN=neurod1
PE=1 SV=1
Length = 352
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 45/64 (70%)
Query: 95 MKKRRLAANARERRRMSGLNEAFDRLREVIPCIGIEHKLSKFETLQMAQTYIHSLRDLLT 154
K RR+ ANARER RM GLN+A D LR+V+PC KLSK ETL++A+ YI +L ++L
Sbjct: 100 FKVRRMKANARERNRMHGLNDALDSLRKVVPCYSKTQKLSKIETLRLAKNYIWALSEILR 159
Query: 155 SANS 158
S S
Sbjct: 160 SGKS 163
>sp|Q60867|NDF1_MOUSE Neurogenic differentiation factor 1 OS=Mus musculus GN=Neurod1 PE=1
SV=2
Length = 357
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 44/64 (68%)
Query: 95 MKKRRLAANARERRRMSGLNEAFDRLREVIPCIGIEHKLSKFETLQMAQTYIHSLRDLLT 154
K RR+ ANARER RM GLN A D LR+V+PC KLSK ETL++A+ YI +L ++L
Sbjct: 99 FKLRRMKANARERNRMHGLNAALDNLRKVVPCYSKTQKLSKIETLRLAKNYIWALSEILR 158
Query: 155 SANS 158
S S
Sbjct: 159 SGKS 162
>sp|Q64289|NDF1_RAT Neurogenic differentiation factor 1 OS=Rattus norvegicus GN=Neurod1
PE=1 SV=1
Length = 357
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 44/64 (68%)
Query: 95 MKKRRLAANARERRRMSGLNEAFDRLREVIPCIGIEHKLSKFETLQMAQTYIHSLRDLLT 154
K RR+ ANARER RM GLN A D LR+V+PC KLSK ETL++A+ YI +L ++L
Sbjct: 99 FKLRRMKANARERNRMHGLNAALDNLRKVVPCYSKTQKLSKIETLRLAKNYIWALSEILR 158
Query: 155 SANS 158
S S
Sbjct: 159 SGKS 162
>sp|Q60430|NDF1_MESAU Neurogenic differentiation factor 1 OS=Mesocricetus auratus
GN=NEUROD1 PE=1 SV=2
Length = 355
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 44/64 (68%)
Query: 95 MKKRRLAANARERRRMSGLNEAFDRLREVIPCIGIEHKLSKFETLQMAQTYIHSLRDLLT 154
K RR+ ANARER RM GLN A D LR+V+PC KLSK ETL++A+ YI +L ++L
Sbjct: 98 FKLRRMKANARERNRMHGLNAALDNLRKVVPCYSKTQKLSKIETLRLAKNYIWALSEILR 157
Query: 155 SANS 158
S S
Sbjct: 158 SGKS 161
>sp|O42202|NDF1_DANRE Neurogenic differentiation factor 1 OS=Danio rerio GN=neurod1 PE=1
SV=1
Length = 350
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 46/66 (69%)
Query: 93 QVMKKRRLAANARERRRMSGLNEAFDRLREVIPCIGIEHKLSKFETLQMAQTYIHSLRDL 152
Q K RR+ ANARER RM GLN+A + LR+V+PC KLSK ETL++A+ YI +L ++
Sbjct: 92 QRFKMRRMKANARERNRMHGLNDALESLRKVVPCYSKTQKLSKIETLRLAKNYIWALSEI 151
Query: 153 LTSANS 158
L S S
Sbjct: 152 LRSGKS 157
>sp|Q13562|NDF1_HUMAN Neurogenic differentiation factor 1 OS=Homo sapiens GN=NEUROD1 PE=1
SV=3
Length = 356
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 44/64 (68%)
Query: 95 MKKRRLAANARERRRMSGLNEAFDRLREVIPCIGIEHKLSKFETLQMAQTYIHSLRDLLT 154
K RR+ ANARER RM GLN A D LR+V+PC KLSK ETL++A+ YI +L ++L
Sbjct: 99 FKLRRMKANARERNRMHGLNAALDNLRKVVPCYSKTQKLSKIETLRLAKNYIWALSEILR 158
Query: 155 SANS 158
S S
Sbjct: 159 SGKS 162
>sp|P79765|NDF1_CHICK Neurogenic differentiation factor 1 OS=Gallus gallus GN=NEUROD1
PE=2 SV=1
Length = 357
Score = 73.2 bits (178), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 44/64 (68%)
Query: 95 MKKRRLAANARERRRMSGLNEAFDRLREVIPCIGIEHKLSKFETLQMAQTYIHSLRDLLT 154
K RR+ ANARER RM GLN A D LR+V+PC KLSK ETL++A+ YI +L ++L
Sbjct: 102 FKLRRMKANARERNRMHGLNAALDNLRKVVPCYSKTQKLSKIETLRLAKNYIWALSEILR 161
Query: 155 SANS 158
S S
Sbjct: 162 SGKS 165
>sp|Q6NYU3|NDF6A_DANRE Neurogenic differentiation factor 6-A OS=Danio rerio GN=neurod6a
PE=2 SV=1
Length = 327
Score = 72.8 bits (177), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 45/62 (72%)
Query: 95 MKKRRLAANARERRRMSGLNEAFDRLREVIPCIGIEHKLSKFETLQMAQTYIHSLRDLLT 154
+K RR+ ANARER RM GLN A D LR+V+PC KLSK ETL++A+ YI +L ++L+
Sbjct: 86 VKVRRMEANARERNRMHGLNNALDSLRKVVPCYSKTQKLSKIETLRLAKNYIWALSEILS 145
Query: 155 SA 156
+
Sbjct: 146 TG 147
>sp|Q4R5G6|NDF6_MACFA Neurogenic differentiation factor 6 OS=Macaca fascicularis
GN=NEUROD6 PE=2 SV=1
Length = 337
Score = 69.7 bits (169), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 33/59 (55%), Positives = 43/59 (72%)
Query: 95 MKKRRLAANARERRRMSGLNEAFDRLREVIPCIGIEHKLSKFETLQMAQTYIHSLRDLL 153
+K RR ANARER RM GLN+A D LR+V+PC KLSK ETL++A+ YI +L ++L
Sbjct: 92 VKFRRQEANARERNRMHGLNDALDNLRKVVPCYSKTQKLSKIETLRLAKNYIWALSEIL 150
>sp|Q96NK8|NDF6_HUMAN Neurogenic differentiation factor 6 OS=Homo sapiens GN=NEUROD6 PE=2
SV=1
Length = 337
Score = 69.7 bits (169), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 33/59 (55%), Positives = 43/59 (72%)
Query: 95 MKKRRLAANARERRRMSGLNEAFDRLREVIPCIGIEHKLSKFETLQMAQTYIHSLRDLL 153
+K RR ANARER RM GLN+A D LR+V+PC KLSK ETL++A+ YI +L ++L
Sbjct: 92 VKFRRQEANARERNRMHGLNDALDNLRKVVPCYSKTQKLSKIETLRLAKNYIWALSEIL 150
>sp|Q08DI0|NDF6_BOVIN Neurogenic differentiation factor 6 OS=Bos taurus GN=NEUROD6 PE=2
SV=1
Length = 337
Score = 69.7 bits (169), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 33/59 (55%), Positives = 43/59 (72%)
Query: 95 MKKRRLAANARERRRMSGLNEAFDRLREVIPCIGIEHKLSKFETLQMAQTYIHSLRDLL 153
+K RR ANARER RM GLN+A D LR+V+PC KLSK ETL++A+ YI +L ++L
Sbjct: 92 VKFRRQEANARERNRMHGLNDALDNLRKVVPCYSKTQKLSKIETLRLAKNYIWALSEIL 150
>sp|P48986|NDF6_MOUSE Neurogenic differentiation factor 6 OS=Mus musculus GN=Neurod6 PE=2
SV=1
Length = 337
Score = 69.7 bits (169), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 33/59 (55%), Positives = 43/59 (72%)
Query: 95 MKKRRLAANARERRRMSGLNEAFDRLREVIPCIGIEHKLSKFETLQMAQTYIHSLRDLL 153
+K RR ANARER RM GLN+A D LR+V+PC KLSK ETL++A+ YI +L ++L
Sbjct: 92 VKFRRQEANARERNRMHGLNDALDNLRKVVPCYSKTQKLSKIETLRLAKNYIWALSEIL 150
>sp|Q9HD90|NDF4_HUMAN Neurogenic differentiation factor 4 OS=Homo sapiens GN=NEUROD4 PE=2
SV=2
Length = 331
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 44/64 (68%)
Query: 95 MKKRRLAANARERRRMSGLNEAFDRLREVIPCIGIEHKLSKFETLQMAQTYIHSLRDLLT 154
+ RR+ ANARER RM GLN+A D LR V+PC KLSK ETL++A+ YI +L ++L
Sbjct: 85 FRARRVKANARERTRMHGLNDALDNLRRVMPCYSKTQKLSKIETLRLARNYIWALSEVLE 144
Query: 155 SANS 158
+ +
Sbjct: 145 TGQT 148
>sp|O09105|NDF4_MOUSE Neurogenic differentiation factor 4 OS=Mus musculus GN=Neurod4 PE=1
SV=1
Length = 330
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 44/64 (68%)
Query: 95 MKKRRLAANARERRRMSGLNEAFDRLREVIPCIGIEHKLSKFETLQMAQTYIHSLRDLLT 154
+ RR+ ANARER RM GLN+A D LR V+PC KLSK ETL++A+ YI +L ++L
Sbjct: 85 FRARRVKANARERTRMHGLNDALDNLRRVMPCYSKTQKLSKIETLRLARNYIWALSEVLE 144
Query: 155 SANS 158
+ +
Sbjct: 145 TGQT 148
>sp|P79766|NDF4_CHICK Neurogenic differentiation factor 4 OS=Gallus gallus GN=NEUROD4
PE=2 SV=1
Length = 330
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 44/64 (68%)
Query: 95 MKKRRLAANARERRRMSGLNEAFDRLREVIPCIGIEHKLSKFETLQMAQTYIHSLRDLLT 154
+ RR+ ANARER RM GLN+A D LR V+PC KLSK ETL++A+ YI +L ++L
Sbjct: 85 FRARRVKANARERTRMHGLNDALDNLRRVMPCYSKTQKLSKIETLRLARNYIWALSEVLE 144
Query: 155 SANS 158
+ +
Sbjct: 145 TGQT 148
>sp|A8E5T6|TCF21_XENTR Transcription factor 21 OS=Xenopus tropicalis GN=tcf21 PE=2 SV=1
Length = 179
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 74/143 (51%), Gaps = 21/143 (14%)
Query: 15 EVLTELEEFDFKQTNQDPREEFDTNYDSNYDRQYCDSISNEDMLTVPREFKPILISHASS 74
E E+E + DP +EF + DSN + CD+ S P++ +S
Sbjct: 10 EDFQEVEMLECDGIKLDPNKEFGISNDSNEESSTCDNGS-------PKK------GRGTS 56
Query: 75 NPRRRRRNSAPSGSVPPPQVMKK----RRLAANARERRRMSGLNEAFDRLREVIPCIGIE 130
RR+ APS P + ++ +R AANARER RM L++AF RL+ +P + +
Sbjct: 57 GKRRK----APSKKSPLGNINQEGKQVQRNAANARERARMRVLSKAFSRLKTTLPWVPPD 112
Query: 131 HKLSKFETLQMAQTYIHSLRDLL 153
KLSK +TL++A +YI LR +L
Sbjct: 113 TKLSKLDTLRLASSYIAHLRQIL 135
>sp|Q9W6C7|NDF6B_DANRE Neurogenic differentiation factor 6-B OS=Danio rerio GN=neurod6b
PE=1 SV=3
Length = 317
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 44/62 (70%)
Query: 95 MKKRRLAANARERRRMSGLNEAFDRLREVIPCIGIEHKLSKFETLQMAQTYIHSLRDLLT 154
+K RR ANARER RM GLN+A + LR+V+PC KLSK ETL++A+ YI +L + L+
Sbjct: 76 VKMRRQEANARERSRMHGLNDALESLRKVVPCYSKTQKLSKIETLRLAKNYIWALSETLS 135
Query: 155 SA 156
+
Sbjct: 136 AG 137
>sp|Q6GNB7|TCF21_XENLA Transcription factor 21 OS=Xenopus laevis GN=tcf21 PE=2 SV=1
Length = 179
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 78/141 (55%), Gaps = 17/141 (12%)
Query: 15 EVLTELEEFDFKQTNQDPREEFDTNYDSNYDRQYCDSISNEDMLTVPREFKPILISHASS 74
E ++E + DP +EF + DSN + CD+ S P++ + +
Sbjct: 10 EDFQDMEMLECDGIKLDPNKEFGISNDSNEESSTCDNGS-------PKKGR-------GT 55
Query: 75 NPRRRRRNS--APSGSVPPPQVMKKRRLAANARERRRMSGLNEAFDRLREVIPCIGIEHK 132
+ +RR+ +S +P G++ + + +R AANARER RM L++AF RL+ +P + + K
Sbjct: 56 SGKRRKASSKKSPLGTINQ-EGKQVQRNAANARERARMRVLSKAFSRLKTTLPWVPPDTK 114
Query: 133 LSKFETLQMAQTYIHSLRDLL 153
LSK +TL++A +YI LR +L
Sbjct: 115 LSKLDTLRLASSYIAHLRQIL 135
>sp|Q63689|NDF2_RAT Neurogenic differentiation factor 2 OS=Rattus norvegicus GN=Neurod2
PE=1 SV=2
Length = 382
Score = 66.6 bits (161), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 33/61 (54%), Positives = 41/61 (67%)
Query: 96 KKRRLAANARERRRMSGLNEAFDRLREVIPCIGIEHKLSKFETLQMAQTYIHSLRDLLTS 155
K RR ANARER RM LN A D LR+V+PC KLSK ETL++A+ YI +L ++L S
Sbjct: 120 KLRRQKANARERNRMHDLNAALDNLRKVVPCYSKTQKLSKIETLRLAKNYIWALSEILRS 179
Query: 156 A 156
Sbjct: 180 G 180
>sp|Q62414|NDF2_MOUSE Neurogenic differentiation factor 2 OS=Mus musculus GN=Neurod2 PE=1
SV=3
Length = 383
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 33/61 (54%), Positives = 41/61 (67%)
Query: 96 KKRRLAANARERRRMSGLNEAFDRLREVIPCIGIEHKLSKFETLQMAQTYIHSLRDLLTS 155
K RR ANARER RM LN A D LR+V+PC KLSK ETL++A+ YI +L ++L S
Sbjct: 121 KLRRQKANARERNRMHDLNAALDNLRKVVPCYSKTQKLSKIETLRLAKNYIWALSEILRS 180
Query: 156 A 156
Sbjct: 181 G 181
>sp|Q15784|NDF2_HUMAN Neurogenic differentiation factor 2 OS=Homo sapiens GN=NEUROD2 PE=2
SV=2
Length = 382
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 33/61 (54%), Positives = 41/61 (67%)
Query: 96 KKRRLAANARERRRMSGLNEAFDRLREVIPCIGIEHKLSKFETLQMAQTYIHSLRDLLTS 155
K RR ANARER RM LN A D LR+V+PC KLSK ETL++A+ YI +L ++L S
Sbjct: 120 KLRRQKANARERNRMHDLNAALDNLRKVVPCYSKTQKLSKIETLRLAKNYIWALSEILRS 179
Query: 156 A 156
Sbjct: 180 G 180
>sp|Q9VGJ5|FER3_DROME Protein Fer3 OS=Drosophila melanogaster GN=fer3 PE=2 SV=2
Length = 195
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
Query: 95 MKKRRLAANARERRRMSGLNEAFDRLREVIPCIGIEHKLSKFETLQMAQTYIHSLRDLLT 154
M +RR AAN RERRRM LNEAFD+LR +P E +LS+ ETL++A TYI + +LL+
Sbjct: 85 MAQRR-AANIRERRRMFNLNEAFDKLRRKVPTFAYEKRLSRIETLRLAITYIGFMAELLS 143
Query: 155 SANS 158
S
Sbjct: 144 GTPS 147
>sp|Q7RTS1|BHA15_HUMAN Class A basic helix-loop-helix protein 15 OS=Homo sapiens
GN=BHLHA15 PE=1 SV=1
Length = 189
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/71 (52%), Positives = 44/71 (61%)
Query: 79 RRRNSAPSGSVPPPQVMKKRRLAANARERRRMSGLNEAFDRLREVIPCIGIEHKLSKFET 138
RRR PSG +RRL +N RER+RM LN AF LREVIP + + KLSK ET
Sbjct: 57 RRRRPGPSGPGGRRDSSIQRRLESNERERQRMHKLNNAFQALREVIPHVRADKKLSKIET 116
Query: 139 LQMAQTYIHSL 149
L +A+ YI SL
Sbjct: 117 LTLAKNYIKSL 127
>sp|P79920|NDF4_XENLA Neurogenic differentiation factor 4 OS=Xenopus laevis GN=neurod4
PE=1 SV=1
Length = 315
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/52 (57%), Positives = 38/52 (73%)
Query: 102 ANARERRRMSGLNEAFDRLREVIPCIGIEHKLSKFETLQMAQTYIHSLRDLL 153
ANARER RM GLN+A + LR V+PC KLSK ETL++A+ YI +L D+L
Sbjct: 83 ANARERSRMHGLNDALENLRRVMPCYSKTQKLSKIETLRLARNYIWALSDIL 134
>sp|P46581|NDF1_CAEEL Neurogenic differentiation factor 1 OS=Caenorhabditis elegans
GN=cnd-1 PE=2 SV=1
Length = 192
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/60 (53%), Positives = 40/60 (66%)
Query: 96 KKRRLAANARERRRMSGLNEAFDRLREVIPCIGIEHKLSKFETLQMAQTYIHSLRDLLTS 155
K RR+ AN RER RM GLN A D LRE IP KLSK ETL++A+ YI +L+ +L +
Sbjct: 18 KVRRVKANGRERARMHGLNNALDMLREYIPITTQHQKLSKIETLRLARNYIDALQRMLQT 77
>sp|O35437|TCF21_MOUSE Transcription factor 21 OS=Mus musculus GN=Tcf21 PE=2 SV=1
Length = 179
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 73/143 (51%), Gaps = 21/143 (14%)
Query: 15 EVLTELEEFDFKQTNQDPREEFDTNYDSNYDRQYCDSISNEDMLTVPREFKPILISHASS 74
E L E+E D D +EF T+ +S + C++ S P++ + L
Sbjct: 10 EDLQEVEMLDCDSLKVDSNKEFGTSNESTEEGSNCENGS-------PQKGRGGL------ 56
Query: 75 NPRRRRRNSAPSGSVPPPQVMKK----RRLAANARERRRMSGLNEAFDRLREVIPCIGIE 130
+R AP+ P V ++ +R AANARER RM L++AF RL+ +P + +
Sbjct: 57 ----GKRRKAPTKKSPLSGVSQEGKQVQRNAANARERARMRVLSKAFSRLKTTLPWVPPD 112
Query: 131 HKLSKFETLQMAQTYIHSLRDLL 153
KLSK +TL++A +YI LR +L
Sbjct: 113 TKLSKLDTLRLASSYIAHLRQIL 135
>sp|Q5E9S3|TCF21_BOVIN Transcription factor 21 OS=Bos taurus GN=TCF21 PE=2 SV=1
Length = 179
Score = 63.5 bits (153), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 73/143 (51%), Gaps = 21/143 (14%)
Query: 15 EVLTELEEFDFKQTNQDPREEFDTNYDSNYDRQYCDSISNEDMLTVPREFKPILISHASS 74
E L E+E D D +EF T+ +S + C++ S P++ + L
Sbjct: 10 EDLQEVEMLDCDGLKMDSNKEFVTSNESTEESSNCEAGS-------PQKGRGGL------ 56
Query: 75 NPRRRRRNSAPSGSVPPPQVMKK----RRLAANARERRRMSGLNEAFDRLREVIPCIGIE 130
+R AP+ P V ++ +R AANARER RM L++AF RL+ +P + +
Sbjct: 57 ----GKRRKAPTKKSPLSGVSQEGKQVQRNAANARERARMRVLSKAFSRLKTTLPWVPPD 112
Query: 131 HKLSKFETLQMAQTYIHSLRDLL 153
KLSK +TL++A +YI LR +L
Sbjct: 113 TKLSKLDTLRLASSYIAHLRQIL 135
>sp|Q9W6C8|NDF2_DANRE Neurogenic differentiation factor 2 OS=Danio rerio GN=neurod2 PE=2
SV=1
Length = 363
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 31/58 (53%), Positives = 39/58 (67%)
Query: 96 KKRRLAANARERRRMSGLNEAFDRLREVIPCIGIEHKLSKFETLQMAQTYIHSLRDLL 153
K RR ANARER RM LN A D L +V+PC KLSK ETL++A+ YI +L ++L
Sbjct: 106 KVRRQKANARERTRMHDLNSALDNLLKVVPCYSKTQKLSKIETLRLAKNYIWALSEIL 163
>sp|P70562|BHA15_RAT Class A basic helix-loop-helix protein 15 OS=Rattus norvegicus
GN=Bhlha15 PE=1 SV=1
Length = 197
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 42/62 (67%)
Query: 97 KRRLAANARERRRMSGLNEAFDRLREVIPCIGIEHKLSKFETLQMAQTYIHSLRDLLTSA 156
+RRL +N RER+RM LN AF LREVIP + + KLSK ETL +A+ YI SL + +
Sbjct: 72 QRRLESNERERQRMHKLNNAFQALREVIPHVRADKKLSKIETLTLAKNYIKSLTATILTM 131
Query: 157 NS 158
+S
Sbjct: 132 SS 133
>sp|Q9QYC3|BHA15_MOUSE Class A basic helix-loop-helix protein 15 OS=Mus musculus
GN=Bhlha15 PE=2 SV=1
Length = 197
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 42/62 (67%)
Query: 97 KRRLAANARERRRMSGLNEAFDRLREVIPCIGIEHKLSKFETLQMAQTYIHSLRDLLTSA 156
+RRL +N RER+RM LN AF LREVIP + + KLSK ETL +A+ YI SL + +
Sbjct: 72 QRRLESNERERQRMHKLNNAFQALREVIPHVRADKKLSKIETLTLAKNYIKSLTATILTM 131
Query: 157 NS 158
+S
Sbjct: 132 SS 133
>sp|B6VQA1|DIMM_DROME Protein dimmed OS=Drosophila melanogaster GN=dimm PE=1 SV=1
Length = 390
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/58 (53%), Positives = 41/58 (70%)
Query: 98 RRLAANARERRRMSGLNEAFDRLREVIPCIGIEHKLSKFETLQMAQTYIHSLRDLLTS 155
RRL +N RER RM LN+AF LREVIP + +E +LSK ETL +A+ YI +L ++ S
Sbjct: 157 RRLESNERERMRMHSLNDAFQSLREVIPHVEMERRLSKIETLTLAKNYIINLTHIILS 214
>sp|P79782|TCF15_CHICK Transcription factor 15 OS=Gallus gallus GN=TCF15 PE=2 SV=2
Length = 183
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 44/69 (63%), Gaps = 1/69 (1%)
Query: 92 PQVMKKRRLAANARERRRMSGLNEAFDRLREVIPCIGIEHKLSKFETLQMAQTYIHSLRD 151
P VM K+R AANARER R +N AF LR +IP ++ KLSK ETL++A +YI L +
Sbjct: 56 PMVMVKQRQAANARERDRTQSVNTAFTALRTLIPTEPVDRKLSKIETLRLASSYIAHLAN 115
Query: 152 LLTSANSGC 160
+L GC
Sbjct: 116 VLL-LGEGC 123
>sp|O43680|TCF21_HUMAN Transcription factor 21 OS=Homo sapiens GN=TCF21 PE=2 SV=2
Length = 179
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 73/143 (51%), Gaps = 21/143 (14%)
Query: 15 EVLTELEEFDFKQTNQDPREEFDTNYDSNYDRQYCDSISNEDMLTVPREFKPILISHASS 74
E L E+E + D +EF T+ +S + C++ S P++ + L
Sbjct: 10 EDLQEVEMLECDGLKMDSNKEFVTSNESTEESSNCENGS-------PQKGRGGL------ 56
Query: 75 NPRRRRRNSAPSGSVPPPQVMKK----RRLAANARERRRMSGLNEAFDRLREVIPCIGIE 130
+R AP+ P V ++ +R AANARER RM L++AF RL+ +P + +
Sbjct: 57 ----GKRRKAPTKKSPLSGVSQEGKQVQRNAANARERARMRVLSKAFSRLKTTLPWVPPD 112
Query: 131 HKLSKFETLQMAQTYIHSLRDLL 153
KLSK +TL++A +YI LR +L
Sbjct: 113 TKLSKLDTLRLASSYIAHLRQIL 135
>sp|O42606|NGN1_DANRE Neurogenin-1 OS=Danio rerio GN=neurog1 PE=2 SV=1
Length = 208
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 40/64 (62%)
Query: 94 VMKKRRLAANARERRRMSGLNEAFDRLREVIPCIGIEHKLSKFETLQMAQTYIHSLRDLL 153
V K RRL AN RER RM LN+A D LR V+P + KL+K ETL+ A YI +L + +
Sbjct: 67 VKKNRRLKANDRERNRMHNLNDALDALRSVLPAFPDDTKLTKIETLRFAHNYIWALSETI 126
Query: 154 TSAN 157
A+
Sbjct: 127 RIAD 130
>sp|Q9H2A3|NGN2_HUMAN Neurogenin-2 OS=Homo sapiens GN=NEUROG2 PE=1 SV=2
Length = 272
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 39/61 (63%)
Query: 93 QVMKKRRLAANARERRRMSGLNEAFDRLREVIPCIGIEHKLSKFETLQMAQTYIHSLRDL 152
++ K RRL AN RER RM LN A D LREV+P + KL+K ETL+ A YI +L +
Sbjct: 108 RIKKTRRLKANNRERNRMHNLNAALDALREVLPTFPEDAKLTKIETLRFAHNYIWALTET 167
Query: 153 L 153
L
Sbjct: 168 L 168
>sp|Q923Z4|FER3L_MOUSE Fer3-like protein OS=Mus musculus GN=Ferd3l PE=1 SV=1
Length = 168
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 41/62 (66%)
Query: 94 VMKKRRLAANARERRRMSGLNEAFDRLREVIPCIGIEHKLSKFETLQMAQTYIHSLRDLL 153
+ +R AAN RER+RM LNEAFD+LR +P E +LS+ ETL++A YI + +LL
Sbjct: 100 ITYAQRQAANIRERKRMFNLNEAFDQLRRKVPTFAYEKRLSRIETLRLAIVYISFMTELL 159
Query: 154 TS 155
S
Sbjct: 160 QS 161
>sp|Q96RJ6|FER3L_HUMAN Fer3-like protein OS=Homo sapiens GN=FERD3L PE=2 SV=1
Length = 166
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 39/57 (68%)
Query: 99 RLAANARERRRMSGLNEAFDRLREVIPCIGIEHKLSKFETLQMAQTYIHSLRDLLTS 155
R AAN RER+RM LNEAFD+LR +P E +LS+ ETL++A YI + +LL S
Sbjct: 103 RQAANIRERKRMFNLNEAFDQLRRKVPTFAYEKRLSRIETLRLAIVYISFMTELLES 159
>sp|P70447|NGN2_MOUSE Neurogenin-2 OS=Mus musculus GN=Neurog2 PE=1 SV=1
Length = 263
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 39/61 (63%)
Query: 93 QVMKKRRLAANARERRRMSGLNEAFDRLREVIPCIGIEHKLSKFETLQMAQTYIHSLRDL 152
++ K RRL AN RER RM LN A D LREV+P + KL+K ETL+ A YI +L +
Sbjct: 108 RIKKTRRLKANNRERNRMHNLNAALDALREVLPTFPEDAKLTKIETLRFAHNYIWALTET 167
Query: 153 L 153
L
Sbjct: 168 L 168
>sp|Q7ZSX3|PTF1A_DANRE Pancreas transcription factor 1 subunit alpha OS=Danio rerio
GN=ptf1a PE=2 SV=1
Length = 265
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 43/61 (70%)
Query: 95 MKKRRLAANARERRRMSGLNEAFDRLREVIPCIGIEHKLSKFETLQMAQTYIHSLRDLLT 154
M++ R AAN RERRRM +N+AF+ LR IP + E +LSK +TL++A YI+ L +L+
Sbjct: 113 MQQLRQAANVRERRRMQSINDAFEGLRSHIPTLPYEKRLSKVDTLRLAIGYINFLAELVQ 172
Query: 155 S 155
S
Sbjct: 173 S 173
>sp|Q32PV5|TCF21_DANRE Transcription factor 21 OS=Danio rerio GN=tcf21 PE=2 SV=1
Length = 176
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 73/139 (52%), Gaps = 22/139 (15%)
Query: 15 EVLTELEEFDFKQTNQDPREEFDTNYDSNYDRQYCDSISNEDMLTVPREFKPILISHASS 74
E+L L +F + +DP T+ +S D C+ S + R+ S+
Sbjct: 16 ELLDGLPKFG---SGKDP----GTSNESTEDSSNCEGASVSECTGKRRK---------SA 59
Query: 75 NPRRRRRNSAPSGSVPPPQVMKKRRLAANARERRRMSGLNEAFDRLREVIPCIGIEHKLS 134
N RR SAP+G + ++ R AANARER RM L++AF RL+ +P + + KLS
Sbjct: 60 NMRR----SAPNGVAQEGKQVQ--RNAANARERARMRVLSKAFSRLKTTLPWVPPDTKLS 113
Query: 135 KFETLQMAQTYIHSLRDLL 153
K +TL++A +YI LR +L
Sbjct: 114 KLDTLRLASSYIAHLRQIL 132
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.132 0.379
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 58,303,792
Number of Sequences: 539616
Number of extensions: 2331660
Number of successful extensions: 7914
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 306
Number of HSP's successfully gapped in prelim test: 79
Number of HSP's that attempted gapping in prelim test: 7505
Number of HSP's gapped (non-prelim): 425
length of query: 161
length of database: 191,569,459
effective HSP length: 108
effective length of query: 53
effective length of database: 133,290,931
effective search space: 7064419343
effective search space used: 7064419343
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 56 (26.2 bits)