BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy15843
(517 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1TQN|A Chain A, Crystal Structure Of Human Microsomal P450 3a4
Length = 486
Score = 115 bits (287), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 70/198 (35%), Positives = 112/198 (56%), Gaps = 11/198 (5%)
Query: 290 RRNIEETMEDSAEDVKK-RPAFLDLLIEA-----SERHN-LSDENIREEVDTFMFEGHDT 342
R++++ E ED +K R FL L+I++ +E H LSD + + F+F G++T
Sbjct: 229 RKSVKRMKESRLEDTQKHRVDFLQLMIDSQNSKETESHKALSDLELVAQSIIFIFAGYET 288
Query: 343 TSAAICWTLLLLGSNQEIQNKVYEEI-LVTSFKALHKPFTTRSLNSMKYLEACIKEALRL 401
TS+ + + + L ++ ++Q K+ EEI V KA P T ++ M+YL+ + E LRL
Sbjct: 289 TSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKA---PPTYDTVLQMEYLDMVVNETLRL 345
Query: 402 YPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYDPDRFLSENVAG 461
+P + R +DV + +P+ V+I Y LHRDP+ + PE + P+RF +N
Sbjct: 346 FPIAMRLERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKKNKDN 405
Query: 462 RNPYAYIPFSAGPRNCIG 479
+PY Y PF +GPRNCIG
Sbjct: 406 IDPYIYTPFGSGPRNCIG 423
>pdb|3UA1|A Chain A, Crystal Structure Of The Cytochrome
P4503a4-Bromoergocryptine Complex
pdb|3TJS|A Chain A, Crystal Structure Of The Complex Between Human Cytochrome
P450 3a4 And Desthiazolylmethyloxycarbonyl Ritonavir
Length = 487
Score = 115 bits (287), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 70/198 (35%), Positives = 112/198 (56%), Gaps = 11/198 (5%)
Query: 290 RRNIEETMEDSAEDVKK-RPAFLDLLIEA-----SERHN-LSDENIREEVDTFMFEGHDT 342
R++++ E ED +K R FL L+I++ +E H LSD + + F+F G++T
Sbjct: 230 RKSVKRMKESRLEDTQKHRVDFLQLMIDSQNSKETESHKALSDLELVAQSIIFIFAGYET 289
Query: 343 TSAAICWTLLLLGSNQEIQNKVYEEI-LVTSFKALHKPFTTRSLNSMKYLEACIKEALRL 401
TS+ + + + L ++ ++Q K+ EEI V KA P T ++ M+YL+ + E LRL
Sbjct: 290 TSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKA---PPTYDTVLQMEYLDMVVNETLRL 346
Query: 402 YPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYDPDRFLSENVAG 461
+P + R +DV + +P+ V+I Y LHRDP+ + PE + P+RF +N
Sbjct: 347 FPIAMRLERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKKNKDN 406
Query: 462 RNPYAYIPFSAGPRNCIG 479
+PY Y PF +GPRNCIG
Sbjct: 407 IDPYIYTPFGSGPRNCIG 424
>pdb|1W0E|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0F|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0G|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|2J0D|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2J0D|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2V0M|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|C Chain C, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|D Chain D, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|3NXU|A Chain A, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
pdb|3NXU|B Chain B, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
Length = 485
Score = 115 bits (287), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 70/198 (35%), Positives = 112/198 (56%), Gaps = 11/198 (5%)
Query: 290 RRNIEETMEDSAEDVKK-RPAFLDLLIEA-----SERHN-LSDENIREEVDTFMFEGHDT 342
R++++ E ED +K R FL L+I++ +E H LSD + + F+F G++T
Sbjct: 228 RKSVKRMKESRLEDTQKHRVDFLQLMIDSQNSKETESHKALSDLELVAQSIIFIFAGYET 287
Query: 343 TSAAICWTLLLLGSNQEIQNKVYEEI-LVTSFKALHKPFTTRSLNSMKYLEACIKEALRL 401
TS+ + + + L ++ ++Q K+ EEI V KA P T ++ M+YL+ + E LRL
Sbjct: 288 TSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKA---PPTYDTVLQMEYLDMVVNETLRL 344
Query: 402 YPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYDPDRFLSENVAG 461
+P + R +DV + +P+ V+I Y LHRDP+ + PE + P+RF +N
Sbjct: 345 FPIAMRLERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKKNKDN 404
Query: 462 RNPYAYIPFSAGPRNCIG 479
+PY Y PF +GPRNCIG
Sbjct: 405 IDPYIYTPFGSGPRNCIG 422
>pdb|2VE3|A Chain A, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE3|B Chain B, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE4|A Chain A, Substrate Free Cyanobacterial Cyp120a1
pdb|2VE4|B Chain B, Substrate Free Cyanobacterial Cyp120a1
Length = 444
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 119/231 (51%), Gaps = 21/231 (9%)
Query: 270 NTLHSFSYK----VINERKADLKARRNIEETMEDSAEDVKKRPAFLDLLIEASERHN--L 323
NTL S + ++ E + +KAR+ + ED+ L +L+ A + +N L
Sbjct: 190 NTLFGKSQRARALLLAELEKIIKARQQQPPSEEDA----------LGILLAARDDNNQPL 239
Query: 324 SDENIREEVDTFMFEGHDTTSAAICWTLLLLGSNQEIQNKVYEEILVTSFKALHKPFTTR 383
S +++++ +F GH+T ++A+ LLLG + +I+ +V +E + L + T
Sbjct: 240 SLPELKDQILLLLFAGHETLTSALSSFCLLLGQHSDIRERVRQE---QNKLQLSQELTAE 296
Query: 384 SLNSMKYLEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVF 443
+L M YL+ ++E LRL P V R+L +D + P+ V + H DP+++
Sbjct: 297 TLKKMPYLDQVLQEVLRLIPPVGGGFRELIQDCQFQGFHFPKGWLVSYQISQTHADPDLY 356
Query: 444 PRPELYDPDRFLSENVAGRN-PYAYIPFSAGPRNCIGESEILEREQRKVAT 493
P PE +DP+RF + A N P+A++PF G R C+G+ E E + AT
Sbjct: 357 PDPEKFDPERFTPDGSATHNPPFAHVPFGGGLRECLGK-EFARLEMKLFAT 406
>pdb|3RUK|A Chain A, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|B Chain B, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|C Chain C, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|D Chain D, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3SWZ|A Chain A, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|B Chain B, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|C Chain C, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|D Chain D, Human Cytochrome P450 17a1 In Complex With Tok-001
Length = 494
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/234 (31%), Positives = 120/234 (51%), Gaps = 26/234 (11%)
Query: 275 FSYKVINERKADLKARRNI-EETMEDSAEDVKKRPA--FLDLLIEA---SERHN------ 322
F K + + K+ +K R ++ + +E+ E + LD L++A S+ N
Sbjct: 206 FPNKTLEKLKSHVKIRNDLLNKILENYKEKFRSDSITNMLDTLMQAKMNSDNGNAGPDQD 265
Query: 323 ---LSDENIREEVDTFMFEGHDTTSAAICWTLLLLGSNQEIQNKVYEEILVTSFKALHKP 379
LSD +I + G +TT++ + WTL L N +++ K+YEEI +
Sbjct: 266 SELLSDNHILTTIGDIFGAGVETTTSVVKWTLAFLLHNPQVKKKLYEEI--DQNVGFSRT 323
Query: 380 FTTRSLNSMKYLEACIKEALRLYPSVP-FIARKLSEDVPLPDYVLPRDTEVIIVVYNLHR 438
T N + LEA I+E LRL P P I K + D + ++ + + TEVII ++ LH
Sbjct: 324 PTISDRNRLLLLEATIREVLRLRPVAPMLIPHKANVDSSIGEFAVDKGTEVIINLWALHH 383
Query: 439 DPEVFPRPELYDPDRFLSENVAGRN----PYAYIPFSAGPRNCIGESEILEREQ 488
+ + + +P+ + P+RFL N AG +Y+PF AGPR+CIG EIL R++
Sbjct: 384 NEKEWHQPDQFMPERFL--NPAGTQLISPSVSYLPFGAGPRSCIG--EILARQE 433
>pdb|3EQM|A Chain A, Crystal Structure Of Human Placental Aromatase Cytochrome
P450 In Complex With Androstenedione
pdb|3S79|A Chain A, Human Placental Aromatase Cytochrome P450 (Cyp19a1)
Refined At 2.75 Angstrom
pdb|3S7S|A Chain A, Crystal Structure Of Human Placental Aromatase Complexed
With Breast Cancer Drug Exemestane
pdb|4GL5|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg029 (Compound 4)
pdb|4GL7|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg046 (Compound 5)
Length = 503
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 125/264 (47%), Gaps = 27/264 (10%)
Query: 224 DDSNSEYVKAVYEIGSIIQKRQA------KIHLQPDFLFRLSSLYKNHQRCLNTLHSFSY 277
D SN+ +++ + +I+ K Q + ++PD F++S LYK +++ + L
Sbjct: 197 DTSNTLFLRIPLDESAIVVKIQGYFDAWQALLIKPDIFFKISWLYKKYEKSVKDLKDAIE 256
Query: 278 KVINERKADLKARRNIEETMEDSAEDVKKRPAFLDLLIEASERHNLSDENIREEVDTFMF 337
+I E++ + +EE M+ + E LI A +R +L+ EN+ + + +
Sbjct: 257 VLIAEKRRRISTEEKLEECMDFATE-----------LILAEKRGDLTRENVNQCILEMLI 305
Query: 338 EGHDTTSAAICWTLLLLGSNQEIQNKVYEEILVTSFKALHKPFTTRSLNSMKYLEACIKE 397
DT S ++ + L L+ + ++ + +EI + + + +K +E I E
Sbjct: 306 AAPDTMSVSLFFMLFLIAKHPNVEEAIIKEIQTVIGE---RDIKIDDIQKLKVMENFIYE 362
Query: 398 ALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYDPDRFLSE 457
++R P V + RK ED + Y + + T +I+ + +HR E FP+ P+ F E
Sbjct: 363 SMRYQPVVDLVMRKALEDDVIDGYPVKKGTNIILNIGRMHR-LEFFPK-----PNEFTLE 416
Query: 458 NVAGRNPYAYI-PFSAGPRNCIGE 480
N A PY Y PF GPR C G+
Sbjct: 417 NFAKNVPYRYFQPFGFGPRGCAGK 440
>pdb|3EBS|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3T3Q|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
Length = 476
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 52/147 (35%), Positives = 79/147 (53%), Gaps = 3/147 (2%)
Query: 336 MFEGHDTTSAAICWTLLLLGSNQEIQNKVYEEILVTSFKALHKPFTTRSLNSMKYLEACI 395
F G +T S + + LLL + E++ KV+EEI K F R+ M Y+EA I
Sbjct: 277 FFAGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRA--KMPYMEAVI 334
Query: 396 KEALRLYPSVPF-IARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYDPDRF 454
E R +P +AR++ +D D+ LP+ TEV ++ ++ RDP F P+ ++P F
Sbjct: 335 HEIQRFGDVIPMGLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHF 394
Query: 455 LSENVAGRNPYAYIPFSAGPRNCIGES 481
L+E + A++PFS G RNC GE
Sbjct: 395 LNEKGQFKKSDAFVPFSIGKRNCFGEG 421
>pdb|3IBD|A Chain A, Crystal Structure Of A Cytochrome P450 2b6 Genetic Variant
In Complex With The Inhibitor
4-(4-Chlorophenyl)imidazole
pdb|3QOA|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-Benzylpyridine.
pdb|3QU8|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|B Chain B, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|C Chain C, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|D Chain D, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|E Chain E, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|F Chain F, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3UA5|A Chain A, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
pdb|3UA5|B Chain B, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
Length = 476
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 117/269 (43%), Gaps = 15/269 (5%)
Query: 216 MGRKINAQDDSNSEYVKAVYEIGSIIQKRQAKIHLQPDFLFRLSSLYKNHQRCLNTLHSF 275
G++ + QD + + Y+ S+I + LF L S + H H
Sbjct: 165 FGKRFHYQDQEFLKMLNLFYQTFSLISSVFGQ-------LFELFSGFLKH---FPGAHRQ 214
Query: 276 SYKVINERKADL-KARRNIEETMEDSAEDVKKRPAFLDLLIEASERHN-LSDENIREEVD 333
YK + E A + + ET++ SA L + E S H+ S +N+
Sbjct: 215 VYKNLQEINAYIGHSVEKHRETLDPSAPRDLIDTYLLHMEKEKSNAHSEFSHQNLNLNTL 274
Query: 334 TFMFEGHDTTSAAICWTLLLLGSNQEIQNKVYEEILVTSFKALHKPFTTRSLNSMKYLEA 393
+ F G +TTS + + LL+ + +VY EI H+P M Y EA
Sbjct: 275 SLFFAGTETTSTTLRYGFLLMLKYPHVAERVYREI--EQVIGPHRPPELHDRAKMPYTEA 332
Query: 394 CIKEALRLYPSVPF-IARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYDPD 452
I E R +P + +++ Y++P+DTEV +++ DP F +P+ ++PD
Sbjct: 333 VIYEIQRFSDLLPMGVPHIVTQHTSFRGYIIPKDTEVFLILSTALHDPHYFEKPDAFNPD 392
Query: 453 RFLSENVAGRNPYAYIPFSAGPRNCIGES 481
FL N A + A+IPFS G R C+GE
Sbjct: 393 HFLDANGALKKTEAFIPFSLGKRICLGEG 421
>pdb|4DVQ|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4FDH|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
Length = 483
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 89/168 (52%), Gaps = 7/168 (4%)
Query: 312 DLLIEASERHNLSDENIREEVDTFMFEGHDTTSAAICWTLLLLGSNQEIQNKVYEEILVT 371
+LL++A LS E I+ DTT+ + TL L N ++Q + +E L
Sbjct: 266 ELLLKA----ELSLEAIKANSMELTAGSVDTTAFPLLMTLFELARNPDVQQILRQESLAA 321
Query: 372 SFKALHKPFTTRSLNSMKYLEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVII 431
+ P ++ + L A +KE LRLYP F+ R +S D+ L +Y +P T V +
Sbjct: 322 AASISEHP--QKATTELPLLRAALKETLRLYPVGLFLERVVSSDLVLQNYHIPAGTLVQV 379
Query: 432 VVYNLHRDPEVFPRPELYDPDRFLSENVAGRNPYAYIPFSAGPRNCIG 479
+Y+L R+ +FPRPE Y+P R+L +GRN + ++PF G R C+G
Sbjct: 380 FLYSLGRNAALFPRPERYNPQRWLDIRGSGRN-FHHVPFGFGMRQCLG 426
>pdb|2PG7|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
Length = 476
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 51/144 (35%), Positives = 78/144 (54%), Gaps = 3/144 (2%)
Query: 339 GHDTTSAAICWTLLLLGSNQEIQNKVYEEILVTSFKALHKPFTTRSLNSMKYLEACIKEA 398
G +T S + + LLL + E++ KV+EEI K F R+ M Y+EA I E
Sbjct: 280 GTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRA--KMPYMEAVIHEI 337
Query: 399 LRLYPSVPF-IARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYDPDRFLSE 457
R +P +AR++ +D D+ LP+ TEV ++ ++ RDP F P+ ++P FL+E
Sbjct: 338 QRFGDVIPMSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNE 397
Query: 458 NVAGRNPYAYIPFSAGPRNCIGES 481
+ A++PFS G RNC GE
Sbjct: 398 KGQFKKSDAFVPFSIGKRNCFGEG 421
>pdb|2PG5|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297q
Length = 476
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 51/144 (35%), Positives = 78/144 (54%), Gaps = 3/144 (2%)
Query: 339 GHDTTSAAICWTLLLLGSNQEIQNKVYEEILVTSFKALHKPFTTRSLNSMKYLEACIKEA 398
G +T S + + LLL + E++ KV+EEI K F R+ M Y+EA I E
Sbjct: 280 GTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRA--KMPYMEAVIHEI 337
Query: 399 LRLYPSVPF-IARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYDPDRFLSE 457
R +P +AR++ +D D+ LP+ TEV ++ ++ RDP F P+ ++P FL+E
Sbjct: 338 QRFGDVIPMSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNE 397
Query: 458 NVAGRNPYAYIPFSAGPRNCIGES 481
+ A++PFS G RNC GE
Sbjct: 398 KGQFKKSDAFVPFSIGKRNCFGEG 421
>pdb|1Z10|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z11|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|2FDU|A Chain A, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|B Chain B, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|C Chain C, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|D Chain D, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|A Chain A, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|B Chain B, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|C Chain C, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|D Chain D, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDY|A Chain A, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|B Chain B, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|C Chain C, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|D Chain D, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|3T3R|A Chain A, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|B Chain B, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|C Chain C, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|D Chain D, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|4EJJ|A Chain A, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|B Chain B, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|C Chain C, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|D Chain D, Human Cytochrome P450 2a6 In Complex With Nicotine
Length = 476
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 51/144 (35%), Positives = 78/144 (54%), Gaps = 3/144 (2%)
Query: 339 GHDTTSAAICWTLLLLGSNQEIQNKVYEEILVTSFKALHKPFTTRSLNSMKYLEACIKEA 398
G +T S + + LLL + E++ KV+EEI K F R+ M Y+EA I E
Sbjct: 280 GTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRA--KMPYMEAVIHEI 337
Query: 399 LRLYPSVPF-IARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYDPDRFLSE 457
R +P +AR++ +D D+ LP+ TEV ++ ++ RDP F P+ ++P FL+E
Sbjct: 338 QRFGDVIPMSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNE 397
Query: 458 NVAGRNPYAYIPFSAGPRNCIGES 481
+ A++PFS G RNC GE
Sbjct: 398 KGQFKKSDAFVPFSIGKRNCFGEG 421
>pdb|2PG6|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
Length = 476
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 51/144 (35%), Positives = 78/144 (54%), Gaps = 3/144 (2%)
Query: 339 GHDTTSAAICWTLLLLGSNQEIQNKVYEEILVTSFKALHKPFTTRSLNSMKYLEACIKEA 398
G +T S + + LLL + E++ KV+EEI K F R+ M Y+EA I E
Sbjct: 280 GTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRA--KMPYMEAVIHEI 337
Query: 399 LRLYPSVPF-IARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYDPDRFLSE 457
R +P +AR++ +D D+ LP+ TEV ++ ++ RDP F P+ ++P FL+E
Sbjct: 338 QRFGDVIPMSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNE 397
Query: 458 NVAGRNPYAYIPFSAGPRNCIGES 481
+ A++PFS G RNC GE
Sbjct: 398 KGQFKKSDAFVPFSIGKRNCFGEG 421
>pdb|3PSX|A Chain A, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
pdb|3PSX|B Chain B, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
Length = 487
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 88/161 (54%), Gaps = 9/161 (5%)
Query: 323 LSDENIREEVDTFMFEGHDTTSAAICWTLLLLGSNQEIQNKVYEEILVTSFKALHKPFTT 382
L DENIR ++ TF+ GH+TTS + +TL L N + K EE + + L P +
Sbjct: 255 LDDENIRYQIVTFLIAGHETTSGLLSFTLYFLVKNPHVLQKAAEE----AARVLVDPVPS 310
Query: 383 -RSLNSMKYLEACIKEALRLYPSVPFIARKLSEDVPL-PDYVLPRDTEVIIVVYNLHRDP 440
+ + +KY+ + EALRL+P+ P + ED L +Y L + E+++++ LHRD
Sbjct: 311 YKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDEIMVLIPQLHRDK 370
Query: 441 EVFPRP-ELYDPDRFLSENVAGRNPYAYIPFSAGPRNCIGE 480
++ E + P+RF EN + +A+ PF G R CIG+
Sbjct: 371 TIWGDDVEEFRPERF--ENPSAIPQHAFKPFGNGQRACIGQ 409
>pdb|1SMI|A Chain A, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMI|B Chain B, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMJ|A Chain A, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|B Chain B, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|C Chain C, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|D Chain D, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
Length = 471
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 88/161 (54%), Gaps = 9/161 (5%)
Query: 323 LSDENIREEVDTFMFEGHDTTSAAICWTLLLLGSNQEIQNKVYEEILVTSFKALHKPFTT 382
L DENIR ++ TF+ EGH+TTS + + L L N + K EE + + L P +
Sbjct: 249 LDDENIRYQIITFLIEGHETTSGLLSFALYFLVKNPHVLQKAAEE----AARVLVDPVPS 304
Query: 383 -RSLNSMKYLEACIKEALRLYPSVPFIARKLSEDVPL-PDYVLPRDTEVIIVVYNLHRDP 440
+ + +KY+ + EALRL+P+ P + ED L +Y L + E+++++ LHRD
Sbjct: 305 YKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDK 364
Query: 441 EVFPRP-ELYDPDRFLSENVAGRNPYAYIPFSAGPRNCIGE 480
++ E + P+RF EN + +A+ PF G R CIG+
Sbjct: 365 TIWGDDVEEFRPERF--ENPSAIPQHAFKPFGNGQRACIGQ 403
>pdb|1ZOA|A Chain A, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
pdb|1ZOA|B Chain B, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
Length = 473
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 88/161 (54%), Gaps = 9/161 (5%)
Query: 323 LSDENIREEVDTFMFEGHDTTSAAICWTLLLLGSNQEIQNKVYEEILVTSFKALHKPFTT 382
L DENIR ++ TF+ GH+TTS + + L L N + K EE + + L P +
Sbjct: 252 LDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEE----AARVLVDPVPS 307
Query: 383 -RSLNSMKYLEACIKEALRLYPSVPFIARKLSEDVPL-PDYVLPRDTEVIIVVYNLHRDP 440
+ + +KY+ + EALRL+P+VP + ED L +Y L + E+++++ LHRD
Sbjct: 308 YKQVKQLKYVGMVLNEALRLWPTVPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDK 367
Query: 441 EVFPRP-ELYDPDRFLSENVAGRNPYAYIPFSAGPRNCIGE 480
++ E + P+RF EN + +A+ PF G R CIG+
Sbjct: 368 TIWGDDVEEFRPERF--ENPSAIPQHAFKPFGNGQRACIGQ 406
>pdb|3N9Y|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Y|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Z|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3N9Z|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3NA1|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
pdb|3NA1|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
Length = 487
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 119/252 (47%), Gaps = 22/252 (8%)
Query: 230 YVKAVYEIGSIIQKRQAKIHLQPDFLFRL--SSLYKNHQRCLNTLHSFSYKVINERKADL 287
++ A+Y++ ++L PD LFRL + +K+H + + S KAD+
Sbjct: 193 FIDAIYQM---FHTSVPMLNLPPD-LFRLFRTKTWKDHVAAWDVIFS---------KADI 239
Query: 288 KARRNIEETMEDSAEDVKKRPAFLDLLIEASERHNLSDENIREEVDTFMFEGHDTTSAAI 347
+ E + + R LL ++ +S E+I+ V + G DTTS +
Sbjct: 240 YTQNFYWELRQKGSVHHDYRGILYRLLGDSK----MSFEDIKANVTEMLAGGVDTTSMTL 295
Query: 348 CWTLLLLGSNQEIQNKVYEEILVTSFKALHKPFTTRSLNSMKYLEACIKEALRLYPSVPF 407
W L + N ++Q+ + E+L +A T L + L+A IKE LRL+P
Sbjct: 296 QWHLYEMARNLKVQDMLRAEVLAARHQAQGDMATMLQLVPL--LKASIKETLRLHPISVT 353
Query: 408 IARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYDPDRFLSENVAGRNPYAY 467
+ R L D+ L DY++P T V + +Y L R+P F PE +DP R+LS++ +
Sbjct: 354 LQRYLVNDLVLRDYMIPAKTLVQVAIYALGREPTFFFDPENFDPTRWLSKD-KNITYFRN 412
Query: 468 IPFSAGPRNCIG 479
+ F G R C+G
Sbjct: 413 LGFGWGVRQCLG 424
>pdb|3NA0|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
pdb|3NA0|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
Length = 471
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 119/252 (47%), Gaps = 22/252 (8%)
Query: 230 YVKAVYEIGSIIQKRQAKIHLQPDFLFRL--SSLYKNHQRCLNTLHSFSYKVINERKADL 287
++ A+Y++ ++L PD LFRL + +K+H + + S KAD+
Sbjct: 190 FIDAIYQM---FHTSVPMLNLPPD-LFRLFRTKTWKDHVAAWDVIFS---------KADI 236
Query: 288 KARRNIEETMEDSAEDVKKRPAFLDLLIEASERHNLSDENIREEVDTFMFEGHDTTSAAI 347
+ E + + R LL ++ +S E+I+ V + G DTTS +
Sbjct: 237 YTQNFYWELRQKGSVHHDYRGILYRLLGDSK----MSFEDIKANVTEMLAGGVDTTSMTL 292
Query: 348 CWTLLLLGSNQEIQNKVYEEILVTSFKALHKPFTTRSLNSMKYLEACIKEALRLYPSVPF 407
W L + N ++Q+ + E+L +A T L + L+A IKE LRL+P
Sbjct: 293 QWHLYEMARNLKVQDMLRAEVLAARHQAQGDMATMLQLVPL--LKASIKETLRLHPISVT 350
Query: 408 IARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYDPDRFLSENVAGRNPYAY 467
+ R L D+ L DY++P T V + +Y L R+P F PE +DP R+LS++ +
Sbjct: 351 LQRYLVNDLVLRDYMIPAKTLVQVAIYALGREPTFFFDPENFDPTRWLSKD-KNITYFRN 409
Query: 468 IPFSAGPRNCIG 479
+ F G R C+G
Sbjct: 410 LGFGWGVRQCLG 421
>pdb|3EKF|A Chain A, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKF|B Chain B, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 88/161 (54%), Gaps = 9/161 (5%)
Query: 323 LSDENIREEVDTFMFEGHDTTSAAICWTLLLLGSNQEIQNKVYEEILVTSFKALHKPFTT 382
L DENIR ++ TF+ +GH+TTS + + L L N + K EE + + L P +
Sbjct: 249 LDDENIRYQIITFLIQGHETTSGLLSFALYFLVKNPHVLQKAAEE----AARVLVDPVPS 304
Query: 383 -RSLNSMKYLEACIKEALRLYPSVPFIARKLSEDVPL-PDYVLPRDTEVIIVVYNLHRDP 440
+ + +KY+ + EALRL+P+ P + ED L +Y L + E+++++ LHRD
Sbjct: 305 YKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDK 364
Query: 441 EVFPRP-ELYDPDRFLSENVAGRNPYAYIPFSAGPRNCIGE 480
++ E + P+RF EN + +A+ PF G R CIG+
Sbjct: 365 TIWGDDVEEFRPERF--ENPSAIPQHAFKPFGNGQRACIGQ 403
>pdb|2IJ4|A Chain A, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
pdb|2IJ4|B Chain B, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 88/161 (54%), Gaps = 9/161 (5%)
Query: 323 LSDENIREEVDTFMFEGHDTTSAAICWTLLLLGSNQEIQNKVYEEILVTSFKALHKPFTT 382
L DENIR ++ TF+ +GH+TTS + + L L N + K EE + + L P +
Sbjct: 249 LDDENIRYQIITFLIKGHETTSGLLSFALYFLVKNPHVLQKAAEE----AARVLVDPVPS 304
Query: 383 -RSLNSMKYLEACIKEALRLYPSVPFIARKLSEDVPL-PDYVLPRDTEVIIVVYNLHRDP 440
+ + +KY+ + EALRL+P+ P + ED L +Y L + E+++++ LHRD
Sbjct: 305 YKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDK 364
Query: 441 EVFPRP-ELYDPDRFLSENVAGRNPYAYIPFSAGPRNCIGE 480
++ E + P+RF EN + +A+ PF G R CIG+
Sbjct: 365 TIWGDDVEEFRPERF--ENPSAIPQHAFKPFGNGQRACIGQ 403
>pdb|3K9V|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9V|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9Y|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
pdb|3K9Y|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
Length = 482
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 97/189 (51%), Gaps = 4/189 (2%)
Query: 291 RNIEETMEDSAEDVKKRPAFLDLLIEASERHNLSDENIREEVDTFMFEGHDTTSAAICWT 350
++++ +++ + ++P D L + ++ +LS + + V +TT+ ++ W
Sbjct: 248 KSVKPCIDNRLQRYSQQPG-ADFLCDIYQQDHLSKKELYAAVTELQLAAVETTANSLMWI 306
Query: 351 LLLLGSNQEIQNKVYEEILVTSFKALHKPFTTRSLNSMKYLEACIKEALRLYPSVPFIAR 410
L L N + Q ++ +E V S ++ L +M YL+AC+KE++RL PSVPF R
Sbjct: 307 LYNLSRNPQAQRRLLQE--VQSVLPDNQTPRAEDLRNMPYLKACLKESMRLTPSVPFTTR 364
Query: 411 KLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYDPDRFLSENVAGRNPYAYIPF 470
L + L +Y LP+ T + + L + F + P+R+L + NP+A++PF
Sbjct: 365 TLDKPTVLGEYALPKGTVLTLNTQVLGSSEDNFEDSHKFRPERWLQKE-KKINPFAHLPF 423
Query: 471 SAGPRNCIG 479
G R CIG
Sbjct: 424 GIGKRMCIG 432
>pdb|2IJ3|A Chain A, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
pdb|2IJ3|B Chain B, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 87/161 (54%), Gaps = 9/161 (5%)
Query: 323 LSDENIREEVDTFMFEGHDTTSAAICWTLLLLGSNQEIQNKVYEEILVTSFKALHKPFTT 382
L DENIR ++ TF+ GH+TTS + + L L N + K EE + + L P +
Sbjct: 249 LDDENIRYQIITFLIHGHETTSGLLSFALYFLVKNPHVLQKAAEE----AARVLVDPVPS 304
Query: 383 -RSLNSMKYLEACIKEALRLYPSVPFIARKLSEDVPL-PDYVLPRDTEVIIVVYNLHRDP 440
+ + +KY+ + EALRL+P+ P + ED L +Y L + E+++++ LHRD
Sbjct: 305 YKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDK 364
Query: 441 EVFPRP-ELYDPDRFLSENVAGRNPYAYIPFSAGPRNCIGE 480
++ E + P+RF EN + +A+ PF G R CIG+
Sbjct: 365 TIWGDDVEEFRPERF--ENPSAIPQHAFKPFGNGQRACIGQ 403
>pdb|2UWH|A Chain A, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|B Chain B, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|C Chain C, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|D Chain D, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|E Chain E, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|F Chain F, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
Length = 458
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 87/161 (54%), Gaps = 9/161 (5%)
Query: 323 LSDENIREEVDTFMFEGHDTTSAAICWTLLLLGSNQEIQNKVYEEILVTSFKALHKPFTT 382
L DENIR ++ TF+ GH+TTS + + L L N + K EE + + L P +
Sbjct: 249 LDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEE----AARVLVDPVPS 304
Query: 383 -RSLNSMKYLEACIKEALRLYPSVPFIARKLSEDVPL-PDYVLPRDTEVIIVVYNLHRDP 440
+ + +KY+ + EALRL+P+ P + ED L +Y L + E+++++ LHRD
Sbjct: 305 YKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDK 364
Query: 441 EVFPRP-ELYDPDRFLSENVAGRNPYAYIPFSAGPRNCIGE 480
++ E + P+RF EN + +A+ PF G R CIG+
Sbjct: 365 TIWGDDVEEFRPERF--ENPSAIPQHAFKPFGNGQRACIGQ 403
>pdb|1BVY|A Chain A, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
pdb|1BVY|B Chain B, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
Length = 458
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 87/161 (54%), Gaps = 9/161 (5%)
Query: 323 LSDENIREEVDTFMFEGHDTTSAAICWTLLLLGSNQEIQNKVYEEILVTSFKALHKPFTT 382
L DENIR ++ TF+ GH+TTS + + L L N + K EE + + L P +
Sbjct: 249 LDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEE----AARVLVDPVPS 304
Query: 383 -RSLNSMKYLEACIKEALRLYPSVPFIARKLSEDVPL-PDYVLPRDTEVIIVVYNLHRDP 440
+ + +KY+ + EALRL+P+ P + ED L +Y L + E+++++ LHRD
Sbjct: 305 YKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDK 364
Query: 441 EVFPRP-ELYDPDRFLSENVAGRNPYAYIPFSAGPRNCIGE 480
++ E + P+RF EN + +A+ PF G R CIG+
Sbjct: 365 TIWGDDVEEFRPERF--ENPSAIPQHAFKPFGNGQRACIGQ 403
>pdb|2X7Y|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X7Y|B Chain B, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|B Chain B, P450 Bm3 F87a In Complex With Dmso
Length = 455
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 87/161 (54%), Gaps = 9/161 (5%)
Query: 323 LSDENIREEVDTFMFEGHDTTSAAICWTLLLLGSNQEIQNKVYEEILVTSFKALHKPFTT 382
L DENIR ++ TF+ GH+TTS + + L L N + K EE + + L P +
Sbjct: 249 LDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEE----AARVLVDPVPS 304
Query: 383 -RSLNSMKYLEACIKEALRLYPSVPFIARKLSEDVPL-PDYVLPRDTEVIIVVYNLHRDP 440
+ + +KY+ + EALRL+P+ P + ED L +Y L + E+++++ LHRD
Sbjct: 305 YKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDK 364
Query: 441 EVFPRP-ELYDPDRFLSENVAGRNPYAYIPFSAGPRNCIGE 480
++ E + P+RF EN + +A+ PF G R CIG+
Sbjct: 365 TIWGDDVEEFRPERF--ENPSAIPQHAFKPFGNGQRACIGQ 403
>pdb|1JPZ|A Chain A, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1JPZ|B Chain B, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1ZO9|A Chain A, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
pdb|1ZO9|B Chain B, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
Length = 473
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 87/161 (54%), Gaps = 9/161 (5%)
Query: 323 LSDENIREEVDTFMFEGHDTTSAAICWTLLLLGSNQEIQNKVYEEILVTSFKALHKPFTT 382
L DENIR ++ TF+ GH+TTS + + L L N + K EE + + L P +
Sbjct: 252 LDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEE----AARVLVDPVPS 307
Query: 383 -RSLNSMKYLEACIKEALRLYPSVPFIARKLSEDVPL-PDYVLPRDTEVIIVVYNLHRDP 440
+ + +KY+ + EALRL+P+ P + ED L +Y L + E+++++ LHRD
Sbjct: 308 YKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDK 367
Query: 441 EVFPRP-ELYDPDRFLSENVAGRNPYAYIPFSAGPRNCIGE 480
++ E + P+RF EN + +A+ PF G R CIG+
Sbjct: 368 TIWGDDVEEFRPERF--ENPSAIPQHAFKPFGNGQRACIGQ 406
>pdb|3BEN|A Chain A, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
pdb|3BEN|B Chain B, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
Length = 470
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 87/161 (54%), Gaps = 9/161 (5%)
Query: 323 LSDENIREEVDTFMFEGHDTTSAAICWTLLLLGSNQEIQNKVYEEILVTSFKALHKPFTT 382
L DENIR ++ TF+ GH+TTS + + L L N + K EE + + L P +
Sbjct: 250 LDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEE----AARVLVDPVPS 305
Query: 383 -RSLNSMKYLEACIKEALRLYPSVPFIARKLSEDVPL-PDYVLPRDTEVIIVVYNLHRDP 440
+ + +KY+ + EALRL+P+ P + ED L +Y L + E+++++ LHRD
Sbjct: 306 YKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDK 365
Query: 441 EVFPRP-ELYDPDRFLSENVAGRNPYAYIPFSAGPRNCIGE 480
++ E + P+RF EN + +A+ PF G R CIG+
Sbjct: 366 TIWGDDVEEFRPERF--ENPSAIPQHAFKPFGNGQRACIGQ 404
>pdb|2IJ2|A Chain A, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
pdb|2IJ2|B Chain B, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
Length = 470
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 87/161 (54%), Gaps = 9/161 (5%)
Query: 323 LSDENIREEVDTFMFEGHDTTSAAICWTLLLLGSNQEIQNKVYEEILVTSFKALHKPFTT 382
L DENIR ++ TF+ GH+TTS + + L L N + K EE + + L P +
Sbjct: 249 LDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEE----AARVLVDPVPS 304
Query: 383 -RSLNSMKYLEACIKEALRLYPSVPFIARKLSEDVPL-PDYVLPRDTEVIIVVYNLHRDP 440
+ + +KY+ + EALRL+P+ P + ED L +Y L + E+++++ LHRD
Sbjct: 305 YKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDK 364
Query: 441 EVFPRP-ELYDPDRFLSENVAGRNPYAYIPFSAGPRNCIGE 480
++ E + P+RF EN + +A+ PF G R CIG+
Sbjct: 365 TIWGDDVEEFRPERF--ENPSAIPQHAFKPFGNGQRACIGQ 403
>pdb|2BMH|A Chain A, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|2BMH|B Chain B, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|1BU7|A Chain A, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|1BU7|B Chain B, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|2J1M|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J1M|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
Length = 455
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 87/161 (54%), Gaps = 9/161 (5%)
Query: 323 LSDENIREEVDTFMFEGHDTTSAAICWTLLLLGSNQEIQNKVYEEILVTSFKALHKPFTT 382
L DENIR ++ TF+ GH+TTS + + L L N + K EE + + L P +
Sbjct: 249 LDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEE----AARVLVDPVPS 304
Query: 383 -RSLNSMKYLEACIKEALRLYPSVPFIARKLSEDVPL-PDYVLPRDTEVIIVVYNLHRDP 440
+ + +KY+ + EALRL+P+ P + ED L +Y L + E+++++ LHRD
Sbjct: 305 YKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDK 364
Query: 441 EVFPRP-ELYDPDRFLSENVAGRNPYAYIPFSAGPRNCIGE 480
++ E + P+RF EN + +A+ PF G R CIG+
Sbjct: 365 TIWGDDVEEFRPERF--ENPSAIPQHAFKPFGNGQRACIGQ 403
>pdb|2HPD|A Chain A, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|2HPD|B Chain B, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|1FAG|A Chain A, Structure Of Cytochrome P450
pdb|1FAG|B Chain B, Structure Of Cytochrome P450
pdb|1FAG|C Chain C, Structure Of Cytochrome P450
pdb|1FAG|D Chain D, Structure Of Cytochrome P450
Length = 471
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 87/161 (54%), Gaps = 9/161 (5%)
Query: 323 LSDENIREEVDTFMFEGHDTTSAAICWTLLLLGSNQEIQNKVYEEILVTSFKALHKPFTT 382
L DENIR ++ TF+ GH+TTS + + L L N + K EE + + L P +
Sbjct: 249 LDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEE----AARVLVDPVPS 304
Query: 383 -RSLNSMKYLEACIKEALRLYPSVPFIARKLSEDVPL-PDYVLPRDTEVIIVVYNLHRDP 440
+ + +KY+ + EALRL+P+ P + ED L +Y L + E+++++ LHRD
Sbjct: 305 YKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDK 364
Query: 441 EVFPRP-ELYDPDRFLSENVAGRNPYAYIPFSAGPRNCIGE 480
++ E + P+RF EN + +A+ PF G R CIG+
Sbjct: 365 TIWGDDVEEFRPERF--ENPSAIPQHAFKPFGNGQRACIGQ 403
>pdb|3QI8|B Chain B, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
pdb|3QI8|A Chain A, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
Length = 472
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 87/161 (54%), Gaps = 9/161 (5%)
Query: 323 LSDENIREEVDTFMFEGHDTTSAAICWTLLLLGSNQEIQNKVYEEILVTSFKALHKPFTT 382
L DENIR ++ TF+ GH+TTS + + L L N + K EE + + L P +
Sbjct: 250 LDDENIRYQIITFLIAGHETTSGLLTFALYFLVKNPHVLQKAAEE----AARVLVDPVPS 305
Query: 383 -RSLNSMKYLEACIKEALRLYPSVPFIARKLSEDVPL-PDYVLPRDTEVIIVVYNLHRDP 440
+ + +KY+ + EALR++P+ P + ED L +Y L + E+++++ LHRD
Sbjct: 306 YKQVKQLKYVGMVLNEALRIWPTAPAFSLYAKEDTMLGGEYPLEKGDELMVLIPQLHRDK 365
Query: 441 EVFPRP-ELYDPDRFLSENVAGRNPYAYIPFSAGPRNCIGE 480
V+ E + P+RF EN + +A+ PF G R CIG+
Sbjct: 366 TVWGDDVEEFRPERF--ENPSAIPQHAFKPFGNGQRACIGQ 404
>pdb|3KX3|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX3|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 87/161 (54%), Gaps = 9/161 (5%)
Query: 323 LSDENIREEVDTFMFEGHDTTSAAICWTLLLLGSNQEIQNKVYEEILVTSFKALHKPFTT 382
L DENIR ++ TF+ GH+TTS + + L L N + K EE + + L P +
Sbjct: 249 LDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEE----AARVLVDPVPS 304
Query: 383 -RSLNSMKYLEACIKEALRLYPSVPFIARKLSEDVPL-PDYVLPRDTEVIIVVYNLHRDP 440
+ + +KY+ + EALRL+P+ P + ED L +Y L + E+++++ LHRD
Sbjct: 305 YKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDK 364
Query: 441 EVFPRP-ELYDPDRFLSENVAGRNPYAYIPFSAGPRNCIGE 480
++ E + P+RF EN + +A+ PF G R CIG+
Sbjct: 365 TIWGDDVEEFRPERF--ENPSAIPQHAFKPFGNGQRACIGQ 403
>pdb|3NPL|A Chain A, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
pdb|3NPL|B Chain B, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
Length = 470
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 87/161 (54%), Gaps = 9/161 (5%)
Query: 323 LSDENIREEVDTFMFEGHDTTSAAICWTLLLLGSNQEIQNKVYEEILVTSFKALHKPFTT 382
L DENIR ++ TF+ GH+TTS + + L L N + K EE + + L P +
Sbjct: 250 LDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEE----AARVLVDPVPS 305
Query: 383 -RSLNSMKYLEACIKEALRLYPSVPFIARKLSEDVPL-PDYVLPRDTEVIIVVYNLHRDP 440
+ + +KY+ + EALRL+P+ P + ED L +Y L + E+++++ LHRD
Sbjct: 306 YKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDK 365
Query: 441 EVFPRP-ELYDPDRFLSENVAGRNPYAYIPFSAGPRNCIGE 480
++ E + P+RF EN + +A+ PF G R CIG+
Sbjct: 366 TIWGDDVEEFRPERF--ENPSAIPQHAFKPFGNGQRACIGQ 404
>pdb|2NNB|A Chain A, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
pdb|2NNB|B Chain B, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
Length = 471
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 87/161 (54%), Gaps = 9/161 (5%)
Query: 323 LSDENIREEVDTFMFEGHDTTSAAICWTLLLLGSNQEIQNKVYEEILVTSFKALHKPFTT 382
L DENIR ++ TF+ GH+TTS + + L L N + K EE + + L P +
Sbjct: 249 LDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEE----AARVLVDPVPS 304
Query: 383 -RSLNSMKYLEACIKEALRLYPSVPFIARKLSEDVPL-PDYVLPRDTEVIIVVYNLHRDP 440
+ + +KY+ + EALRL+P+ P + ED L +Y L + E+++++ LHRD
Sbjct: 305 YKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDK 364
Query: 441 EVFPRP-ELYDPDRFLSENVAGRNPYAYIPFSAGPRNCIGE 480
++ E + P+RF EN + +A+ PF G R CIG+
Sbjct: 365 TIWGDDVEEFRPERF--ENPSAIPQHAFKPFGNGQRACIGK 403
>pdb|3EKD|A Chain A, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKD|B Chain B, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 87/161 (54%), Gaps = 9/161 (5%)
Query: 323 LSDENIREEVDTFMFEGHDTTSAAICWTLLLLGSNQEIQNKVYEEILVTSFKALHKPFTT 382
L DENIR ++ TF+ GH+TTS + + L L N + K EE + + L P +
Sbjct: 249 LDDENIRYQIITFLIMGHETTSGLLSFALYFLVKNPHVLQKAAEE----AARVLVDPVPS 304
Query: 383 -RSLNSMKYLEACIKEALRLYPSVPFIARKLSEDVPL-PDYVLPRDTEVIIVVYNLHRDP 440
+ + +KY+ + EALRL+P+ P + ED L +Y L + E+++++ LHRD
Sbjct: 305 YKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDK 364
Query: 441 EVFPRP-ELYDPDRFLSENVAGRNPYAYIPFSAGPRNCIGE 480
++ E + P+RF EN + +A+ PF G R CIG+
Sbjct: 365 TIWGDDVEEFRPERF--ENPSAIPQHAFKPFGNGQRACIGQ 403
>pdb|1ZO4|A Chain A, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
pdb|1ZO4|B Chain B, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
Length = 473
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 87/161 (54%), Gaps = 9/161 (5%)
Query: 323 LSDENIREEVDTFMFEGHDTTSAAICWTLLLLGSNQEIQNKVYEEILVTSFKALHKPFTT 382
L DENIR ++ TF+ GH+TTS + + L L N + K EE + + L P +
Sbjct: 252 LDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEE----AARVLVDPVPS 307
Query: 383 -RSLNSMKYLEACIKEALRLYPSVPFIARKLSEDVPL-PDYVLPRDTEVIIVVYNLHRDP 440
+ + +KY+ + EALRL+P+ P + ED L +Y L + E+++++ LHRD
Sbjct: 308 YKQVKQLKYVGMVLNEALRLWPTSPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDK 367
Query: 441 EVFPRP-ELYDPDRFLSENVAGRNPYAYIPFSAGPRNCIGE 480
++ E + P+RF EN + +A+ PF G R CIG+
Sbjct: 368 TIWGDDVEEFRPERF--ENPSAIPQHAFKPFGNGQRACIGQ 406
>pdb|3M4V|A Chain A, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
pdb|3M4V|B Chain B, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 87/161 (54%), Gaps = 9/161 (5%)
Query: 323 LSDENIREEVDTFMFEGHDTTSAAICWTLLLLGSNQEIQNKVYEEILVTSFKALHKPFTT 382
L DENIR ++ TF+ GH+TTS + + L L N + K EE + + L P +
Sbjct: 250 LDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEE----AARVLVDPVPS 305
Query: 383 -RSLNSMKYLEACIKEALRLYPSVPFIARKLSEDVPL-PDYVLPRDTEVIIVVYNLHRDP 440
+ + +KY+ + EALRL+P+ P + ED L +Y L + E+++++ LHRD
Sbjct: 306 YKQVKQLKYVGMVLNEALRLWPTAPPFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDK 365
Query: 441 EVFPRP-ELYDPDRFLSENVAGRNPYAYIPFSAGPRNCIGE 480
++ E + P+RF EN + +A+ PF G R CIG+
Sbjct: 366 TIWGDDVEEFRPERF--ENPSAIPQHAFKPFGNGQRACIGQ 404
>pdb|3EKB|A Chain A, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
pdb|3EKB|B Chain B, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
Length = 470
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 87/161 (54%), Gaps = 9/161 (5%)
Query: 323 LSDENIREEVDTFMFEGHDTTSAAICWTLLLLGSNQEIQNKVYEEILVTSFKALHKPFTT 382
L DENIR ++ TF+ GH+TTS + + L L N + K EE + + L P +
Sbjct: 249 LDDENIRYQIITFLICGHETTSGLLSFALYFLVKNPHVLQKAAEE----AARVLVDPVPS 304
Query: 383 -RSLNSMKYLEACIKEALRLYPSVPFIARKLSEDVPL-PDYVLPRDTEVIIVVYNLHRDP 440
+ + +KY+ + EALRL+P+ P + ED L +Y L + E+++++ LHRD
Sbjct: 305 YKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDK 364
Query: 441 EVFPRP-ELYDPDRFLSENVAGRNPYAYIPFSAGPRNCIGE 480
++ E + P+RF EN + +A+ PF G R CIG+
Sbjct: 365 TIWGDDVEEFRPERF--ENPSAIPQHAFKPFGNGQRACIGQ 403
>pdb|1P0X|A Chain A, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0X|B Chain B, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 87/161 (54%), Gaps = 9/161 (5%)
Query: 323 LSDENIREEVDTFMFEGHDTTSAAICWTLLLLGSNQEIQNKVYEEILVTSFKALHKPFTT 382
L DENIR ++ TF+ GH+TTS + + L L N + K EE + + L P +
Sbjct: 249 LDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEE----AARVLVDPVPS 304
Query: 383 -RSLNSMKYLEACIKEALRLYPSVPFIARKLSEDVPL-PDYVLPRDTEVIIVVYNLHRDP 440
+ + +KY+ + EALRL+P+ P + ED L +Y L + E+++++ LHRD
Sbjct: 305 YKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDK 364
Query: 441 EVFPRP-ELYDPDRFLSENVAGRNPYAYIPFSAGPRNCIGE 480
++ E + P+RF EN + +A+ P+ G R CIG+
Sbjct: 365 TIWGDDVEEFRPERF--ENPSAIPQHAFKPYGNGQRACIGQ 403
>pdb|4DUC|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
pdb|4DUC|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
Length = 472
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 87/161 (54%), Gaps = 9/161 (5%)
Query: 323 LSDENIREEVDTFMFEGHDTTSAAICWTLLLLGSNQEIQNKVYEEILVTSFKALHKPFTT 382
L DENIR ++ TF+ GH++TS + + L L N + K EE + + L P +
Sbjct: 250 LDDENIRYQIITFLIAGHESTSGLLSFALYFLVKNPHVLQKAAEE----AARVLVDPVPS 305
Query: 383 -RSLNSMKYLEACIKEALRLYPSVPFIARKLSEDVPL-PDYVLPRDTEVIIVVYNLHRDP 440
+ + +KY+ + EALRL+P+ P + ED L +Y L + E+++++ LHRD
Sbjct: 306 YKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDK 365
Query: 441 EVFPRP-ELYDPDRFLSENVAGRNPYAYIPFSAGPRNCIGE 480
++ E + P+RF EN + +A+ PF G R CIG+
Sbjct: 366 TIWGDDVEEFRPERF--ENPSAIPQHAFKPFGNGQRACIGQ 404
>pdb|4DUD|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUD|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUE|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
pdb|4DUE|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
Length = 471
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 87/161 (54%), Gaps = 9/161 (5%)
Query: 323 LSDENIREEVDTFMFEGHDTTSAAICWTLLLLGSNQEIQNKVYEEILVTSFKALHKPFTT 382
L DENIR ++ TF+ GH++TS + + L L N + K EE + + L P +
Sbjct: 249 LDDENIRYQIITFLIAGHESTSGLLSFALYFLVKNPHVLQKAAEE----AARVLVDPVPS 304
Query: 383 -RSLNSMKYLEACIKEALRLYPSVPFIARKLSEDVPL-PDYVLPRDTEVIIVVYNLHRDP 440
+ + +KY+ + EALRL+P+ P + ED L +Y L + E+++++ LHRD
Sbjct: 305 YKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDK 364
Query: 441 EVFPRP-ELYDPDRFLSENVAGRNPYAYIPFSAGPRNCIGE 480
++ E + P+RF EN + +A+ PF G R CIG+
Sbjct: 365 TIWGDDVEEFRPERF--ENPSAIPQHAFKPFGNGQRACIGQ 403
>pdb|4DUF|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|C Chain C, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|D Chain D, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
Length = 471
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 87/161 (54%), Gaps = 9/161 (5%)
Query: 323 LSDENIREEVDTFMFEGHDTTSAAICWTLLLLGSNQEIQNKVYEEILVTSFKALHKPFTT 382
L DENIR ++ TF+ GH++TS + + L L N + K EE + + L P +
Sbjct: 249 LDDENIRYQIITFLIAGHESTSGLLSFALYFLVKNPHVLQKAAEE----AARVLVDPVPS 304
Query: 383 -RSLNSMKYLEACIKEALRLYPSVPFIARKLSEDVPL-PDYVLPRDTEVIIVVYNLHRDP 440
+ + +KY+ + EALRL+P+ P + ED L +Y L + E+++++ LHRD
Sbjct: 305 YKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDK 364
Query: 441 EVFPRP-ELYDPDRFLSENVAGRNPYAYIPFSAGPRNCIGE 480
++ E + P+RF EN + +A+ PF G R CIG+
Sbjct: 365 TIWGDDVEEFRPERF--ENPSAIPQHAFKPFGNGQRACIGQ 403
>pdb|3DGI|A Chain A, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
pdb|3DGI|B Chain B, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
Length = 461
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 86/161 (53%), Gaps = 9/161 (5%)
Query: 323 LSDENIREEVDTFMFEGHDTTSAAICWTLLLLGSNQEIQNKVYEEILVTSFKALHKPFTT 382
L DENIR ++ TF+ GH+ TS + + L L N + K EE + + L P +
Sbjct: 249 LDDENIRYQIITFLIAGHEATSGLLSFALYFLVKNPHVLQKAAEE----AARVLVDPVPS 304
Query: 383 -RSLNSMKYLEACIKEALRLYPSVPFIARKLSEDVPL-PDYVLPRDTEVIIVVYNLHRDP 440
+ + +KY+ + EALRL+P+ P + ED L +Y L + E+++++ LHRD
Sbjct: 305 YKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDK 364
Query: 441 EVFPRP-ELYDPDRFLSENVAGRNPYAYIPFSAGPRNCIGE 480
++ E + P+RF EN + +A+ PF G R CIG+
Sbjct: 365 TIWGDDVEEFRPERF--ENPSAIPQHAFKPFGNGQRACIGQ 403
>pdb|1YQO|A Chain A, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1YQO|B Chain B, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 86/161 (53%), Gaps = 9/161 (5%)
Query: 323 LSDENIREEVDTFMFEGHDTTSAAICWTLLLLGSNQEIQNKVYEEILVTSFKALHKPFTT 382
L DENIR ++ TF+ GH+ TS + + L L N + K EE + + L P +
Sbjct: 249 LDDENIRYQIITFLIAGHEATSGLLSFALYFLVKNPHVLQKAAEE----AARVLVDPVPS 304
Query: 383 -RSLNSMKYLEACIKEALRLYPSVPFIARKLSEDVPL-PDYVLPRDTEVIIVVYNLHRDP 440
+ + +KY+ + EALRL+P+ P + ED L +Y L + E+++++ LHRD
Sbjct: 305 YKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDK 364
Query: 441 EVFPRP-ELYDPDRFLSENVAGRNPYAYIPFSAGPRNCIGE 480
++ E + P+RF EN + +A+ PF G R CIG+
Sbjct: 365 TIWGDDVEEFRPERF--ENPSAIPQHAFKPFGNGQRACIGQ 403
>pdb|1FAH|A Chain A, Structure Of Cytochrome P450
pdb|1FAH|B Chain B, Structure Of Cytochrome P450
Length = 471
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 86/161 (53%), Gaps = 9/161 (5%)
Query: 323 LSDENIREEVDTFMFEGHDTTSAAICWTLLLLGSNQEIQNKVYEEILVTSFKALHKPFTT 382
L DENIR ++ TF+ GH+ TS + + L L N + K EE + + L P +
Sbjct: 249 LDDENIRYQIITFLIAGHEATSGLLSFALYFLVKNPHVLQKAAEE----AARVLVDPVPS 304
Query: 383 -RSLNSMKYLEACIKEALRLYPSVPFIARKLSEDVPL-PDYVLPRDTEVIIVVYNLHRDP 440
+ + +KY+ + EALRL+P+ P + ED L +Y L + E+++++ LHRD
Sbjct: 305 YKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDK 364
Query: 441 EVFPRP-ELYDPDRFLSENVAGRNPYAYIPFSAGPRNCIGE 480
++ E + P+RF EN + +A+ PF G R CIG+
Sbjct: 365 TIWGDDVEEFRPERF--ENPSAIPQHAFKPFGNGQRACIGQ 403
>pdb|1P0W|A Chain A, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0W|B Chain B, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 87/161 (54%), Gaps = 9/161 (5%)
Query: 323 LSDENIREEVDTFMFEGHDTTSAAICWTLLLLGSNQEIQNKVYEEILVTSFKALHKPFTT 382
L DENIR ++ TF+ GH+TTS + + L L N + K EE + + L P +
Sbjct: 249 LDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEE----AARVLVDPVPS 304
Query: 383 -RSLNSMKYLEACIKEALRLYPSVPFIARKLSEDVPL-PDYVLPRDTEVIIVVYNLHRDP 440
+ + +KY+ + EALRL+P+ P + ED L +Y L + E+++++ LHRD
Sbjct: 305 YKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDK 364
Query: 441 EVFPRP-ELYDPDRFLSENVAGRNPYAYIPFSAGPRNCIGE 480
++ E + P+RF EN + +A+ P+ G R CIG+
Sbjct: 365 TIWGDDVEEFRPERF--ENPSAIPQHAFKPWGNGQRACIGQ 403
>pdb|3CBD|A Chain A, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
pdb|3CBD|B Chain B, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
Length = 455
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 105/221 (47%), Gaps = 23/221 (10%)
Query: 263 KNHQRCLNTLHSFSYKVINERKADLKARRNIEETMEDSAEDVKKRPAFLDLLIEASERHN 322
+ Q + ++ K+I +RKA + ++ M + + P
Sbjct: 203 RQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTQMLNGKDPETGEP-------------- 248
Query: 323 LSDENIREEVDTFMFEGHDTTSAAICWTLLLLGSNQEIQNKVYEEILVTSFKALHKPFTT 382
L D NI ++ TF+ GH+TTS + + L L N + KV EE + + L P +
Sbjct: 249 LDDGNISYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKVAEE----ATRVLVDPVPS 304
Query: 383 -RSLNSMKYLEACIKEALRLYPSVPFIARKLSEDVPL-PDYVLPRDTEVIIVVYNLHRDP 440
+ + +KY+ + EALRL+P+ P + ED L +Y L + EV++++ LHRD
Sbjct: 305 YKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDEVMVLIPQLHRDK 364
Query: 441 EVFPRP-ELYDPDRFLSENVAGRNPYAYIPFSAGPRNCIGE 480
++ E + P+RF EN + +A+ PF G R CIG+
Sbjct: 365 TIWGDDVEEFRPERF--ENPSAIPQHAFKPFGNGQRACIGQ 403
>pdb|1YQP|A Chain A, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
pdb|1YQP|B Chain B, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 86/161 (53%), Gaps = 9/161 (5%)
Query: 323 LSDENIREEVDTFMFEGHDTTSAAICWTLLLLGSNQEIQNKVYEEILVTSFKALHKPFTT 382
L DENIR ++ TF+ GH+ TS + + L L N + K EE + + L P +
Sbjct: 249 LDDENIRYQIITFLIAGHENTSGLLSFALYFLVKNPHVLQKAAEE----AARVLVDPVPS 304
Query: 383 -RSLNSMKYLEACIKEALRLYPSVPFIARKLSEDVPL-PDYVLPRDTEVIIVVYNLHRDP 440
+ + +KY+ + EALRL+P+ P + ED L +Y L + E+++++ LHRD
Sbjct: 305 YKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDK 364
Query: 441 EVFPRP-ELYDPDRFLSENVAGRNPYAYIPFSAGPRNCIGE 480
++ E + P+RF EN + +A+ PF G R CIG+
Sbjct: 365 TIWGDDVEEFRPERF--ENPSAIPQHAFKPFGNGQRACIGQ 403
>pdb|2P85|A Chain A, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|B Chain B, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|C Chain C, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|D Chain D, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|E Chain E, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|F Chain F, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|3T3S|A Chain A, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|B Chain B, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|C Chain C, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|D Chain D, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|E Chain E, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|F Chain F, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|G Chain G, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|H Chain H, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|4EJG|A Chain A, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|B Chain B, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|C Chain C, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|D Chain D, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|E Chain E, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|F Chain F, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|G Chain G, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|H Chain H, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJH|A Chain A, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|B Chain B, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|C Chain C, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|D Chain D, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|E Chain E, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|F Chain F, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|G Chain G, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|H Chain H, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJI|A Chain A, Human Cytochrome P450 2a13 In Complex With Two Molecules
Of 4- (Methylnitrosamino)-1-(3-Puridyl)-1-Butanone
Length = 476
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 75/147 (51%), Gaps = 3/147 (2%)
Query: 336 MFEGHDTTSAAICWTLLLLGSNQEIQNKVYEEILVTSFKALHKPFTTRSLNSMKYLEACI 395
F G +T S + + LLL + E++ KV+EEI K F R+ M Y EA I
Sbjct: 277 FFAGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRA--KMPYTEAVI 334
Query: 396 KEALRLYPSVPF-IARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYDPDRF 454
E R +P +A ++++D D+ LP+ TEV ++ ++ RDP F P ++P F
Sbjct: 335 HEIQRFGDMLPMGLAHRVNKDTKFRDFFLPKGTEVFPMLGSVLRDPRFFSNPRDFNPQHF 394
Query: 455 LSENVAGRNPYAYIPFSAGPRNCIGES 481
L + + A++PFS G R C GE
Sbjct: 395 LDKKGQFKKSDAFVPFSIGKRYCFGEG 421
>pdb|3HF2|A Chain A, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
pdb|3HF2|B Chain B, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 86/161 (53%), Gaps = 9/161 (5%)
Query: 323 LSDENIREEVDTFMFEGHDTTSAAICWTLLLLGSNQEIQNKVYEEILVTSFKALHKPFTT 382
L DENIR ++ TF+ GH+TTS + + L L N + K EE + + L P +
Sbjct: 250 LDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEE----AARVLVDPVPS 305
Query: 383 -RSLNSMKYLEACIKEALRLYPSVPFIARKLSEDVPL-PDYVLPRDTEVIIVVYNLHRDP 440
+ + +KY+ + EALRL+P+ P + ED L +Y L + E+++++ LHRD
Sbjct: 306 YKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDK 365
Query: 441 EVFPRP-ELYDPDRFLSENVAGRNPYAYIPFSAGPRNCIGE 480
++ E + P+RF EN + +A+ PF G R C G+
Sbjct: 366 TIWGDDVEEFRPERF--ENPSAIPQHAFKPFGNGQRACPGQ 404
>pdb|1JME|A Chain A, Crystal Structure Of Phe393his Cytochrome P450 Bm3
pdb|1JME|B Chain B, Crystal Structure Of Phe393his Cytochrome P450 Bm3
Length = 455
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 86/161 (53%), Gaps = 9/161 (5%)
Query: 323 LSDENIREEVDTFMFEGHDTTSAAICWTLLLLGSNQEIQNKVYEEILVTSFKALHKPFTT 382
L DENIR ++ TF+ GH+TTS + + L L N + K EE + + L P +
Sbjct: 249 LDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEE----AARVLVDPVPS 304
Query: 383 -RSLNSMKYLEACIKEALRLYPSVPFIARKLSEDVPL-PDYVLPRDTEVIIVVYNLHRDP 440
+ + +KY+ + EALRL+P+ P + ED L +Y L + E+++++ LHRD
Sbjct: 305 YKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDK 364
Query: 441 EVFPRP-ELYDPDRFLSENVAGRNPYAYIPFSAGPRNCIGE 480
++ E + P+RF EN + +A+ P G R CIG+
Sbjct: 365 TIWGDDVEEFRPERF--ENPSAIPQHAFKPHGNGQRACIGQ 403
>pdb|3KX4|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX4|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 86/161 (53%), Gaps = 9/161 (5%)
Query: 323 LSDENIREEVDTFMFEGHDTTSAAICWTLLLLGSNQEIQNKVYEEILVTSFKALHKPFTT 382
L DENIR ++ TF+ GH+TTS + + L L N + K EE + + L P +
Sbjct: 249 LDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEE----AARVLVDPVPS 304
Query: 383 -RSLNSMKYLEACIKEALRLYPSVPFIARKLSEDVPL-PDYVLPRDTEVIIVVYNLHRDP 440
+ + +KY+ + EALRL+P+ P + ED L +Y L + E+++++ LHRD
Sbjct: 305 YKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDK 364
Query: 441 EVFPRP-ELYDPDRFLSENVAGRNPYAYIPFSAGPRNCIGE 480
++ E + P+RF EN + +A+ PF G R C G+
Sbjct: 365 TIWGDDVEEFRPERF--ENPSAIPQHAFKPFGNGQRACEGQ 403
>pdb|1P0V|A Chain A, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0V|B Chain B, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 86/161 (53%), Gaps = 9/161 (5%)
Query: 323 LSDENIREEVDTFMFEGHDTTSAAICWTLLLLGSNQEIQNKVYEEILVTSFKALHKPFTT 382
L DENIR ++ TF+ GH+TTS + + L L N + K EE + + L P +
Sbjct: 249 LDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEE----AARVLVDPVPS 304
Query: 383 -RSLNSMKYLEACIKEALRLYPSVPFIARKLSEDVPL-PDYVLPRDTEVIIVVYNLHRDP 440
+ + +KY+ + EALRL+P+ P + ED L +Y L + E+++++ LHRD
Sbjct: 305 YKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDK 364
Query: 441 EVFPRP-ELYDPDRFLSENVAGRNPYAYIPFSAGPRNCIGE 480
++ E + P+RF EN + +A+ P G R CIG+
Sbjct: 365 TIWGDDVEEFRPERF--ENPSAIPQHAFKPAGNGQRACIGQ 403
>pdb|4DUB|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
pdb|4DUB|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
Length = 472
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 86/161 (53%), Gaps = 9/161 (5%)
Query: 323 LSDENIREEVDTFMFEGHDTTSAAICWTLLLLGSNQEIQNKVYEEILVTSFKALHKPFTT 382
L DENIR ++ TF+ GH+ TS + + L L N + K EE + + L P +
Sbjct: 250 LDDENIRYQIITFLAAGHEATSGLLSFALYFLVKNPHVLQKAAEE----AARVLVDPVPS 305
Query: 383 -RSLNSMKYLEACIKEALRLYPSVPFIARKLSEDVPL-PDYVLPRDTEVIIVVYNLHRDP 440
+ + +KY+ + EALRL+P+ P + ED L +Y L + E+++++ LHRD
Sbjct: 306 YKQVKQLKYVGMVLNEALRLWPTGPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDK 365
Query: 441 EVFPRP-ELYDPDRFLSENVAGRNPYAYIPFSAGPRNCIGE 480
++ E + P+RF EN + +A+ PF G R CIG+
Sbjct: 366 TIWGDDVEEFRPERF--ENPSAIPQHAFKPFGNGQRACIGQ 404
>pdb|4DUA|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
pdb|4DUA|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
Length = 471
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 86/161 (53%), Gaps = 9/161 (5%)
Query: 323 LSDENIREEVDTFMFEGHDTTSAAICWTLLLLGSNQEIQNKVYEEILVTSFKALHKPFTT 382
L DENIR ++ TF+ GH+ TS + + L L N + K EE + + L P +
Sbjct: 249 LDDENIRYQIITFLAAGHEATSGLLSFALYFLVKNPHVLQKAAEE----AARVLVDPVPS 304
Query: 383 -RSLNSMKYLEACIKEALRLYPSVPFIARKLSEDVPL-PDYVLPRDTEVIIVVYNLHRDP 440
+ + +KY+ + EALRL+P+ P + ED L +Y L + E+++++ LHRD
Sbjct: 305 YKQVKQLKYVGMVLNEALRLWPTGPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDK 364
Query: 441 EVFPRP-ELYDPDRFLSENVAGRNPYAYIPFSAGPRNCIGE 480
++ E + P+RF EN + +A+ PF G R CIG+
Sbjct: 365 TIWGDDVEEFRPERF--ENPSAIPQHAFKPFGNGQRACIGQ 403
>pdb|3KX5|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX5|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 86/161 (53%), Gaps = 9/161 (5%)
Query: 323 LSDENIREEVDTFMFEGHDTTSAAICWTLLLLGSNQEIQNKVYEEILVTSFKALHKPFTT 382
L DENIR ++ T + GH+TTS + + L L N + K EE + + L P +
Sbjct: 249 LDDENIRYQIITELIAGHETTSGLLSFALYFLVKNPHVLQKAAEE----AARVLVDPVPS 304
Query: 383 -RSLNSMKYLEACIKEALRLYPSVPFIARKLSEDVPL-PDYVLPRDTEVIIVVYNLHRDP 440
+ + +KY+ + EALRL+P+ P + ED L +Y L + E+++++ LHRD
Sbjct: 305 YKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDK 364
Query: 441 EVFPRP-ELYDPDRFLSENVAGRNPYAYIPFSAGPRNCIGE 480
++ E + P+RF EN + +A+ PF G R CIG+
Sbjct: 365 TIWGDDVEEFRPERF--ENPSAIPQHAFKPFGNGQRACIGQ 403
>pdb|4DU2|B Chain B, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
pdb|4DU2|A Chain A, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
Length = 470
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 85/161 (52%), Gaps = 9/161 (5%)
Query: 323 LSDENIREEVDTFMFEGHDTTSAAICWTLLLLGSNQEIQNKVYEEILVTSFKALHKPFTT 382
L DENIR ++ TF+ GH+ TS + + L L N K EE + + L P +
Sbjct: 250 LDDENIRYQIITFLAAGHEATSGLLSFALYFLVKNPHELQKAAEE----AARVLVDPVPS 305
Query: 383 -RSLNSMKYLEACIKEALRLYPSVPFIARKLSEDVPL-PDYVLPRDTEVIIVVYNLHRDP 440
+ + +KY+ + EALRL+P+ P + ED L +Y L + E+++++ LHRD
Sbjct: 306 HKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDK 365
Query: 441 EVFPRP-ELYDPDRFLSENVAGRNPYAYIPFSAGPRNCIGE 480
V+ E + P+RF EN + +A+ PF G R CIG+
Sbjct: 366 TVWGDDVEEFRPERF--ENPSAIPQHAFKPFGNGQRACIGQ 404
>pdb|4DTW|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTW|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTY|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTY|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTZ|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
pdb|4DTZ|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
Length = 469
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 85/161 (52%), Gaps = 9/161 (5%)
Query: 323 LSDENIREEVDTFMFEGHDTTSAAICWTLLLLGSNQEIQNKVYEEILVTSFKALHKPFTT 382
L DENIR ++ TF+ GH+ TS + + L L N K EE + + L P +
Sbjct: 249 LDDENIRYQIITFLAAGHEATSGLLSFALYFLVKNPHELQKAAEE----AARVLVDPVPS 304
Query: 383 -RSLNSMKYLEACIKEALRLYPSVPFIARKLSEDVPL-PDYVLPRDTEVIIVVYNLHRDP 440
+ + +KY+ + EALRL+P+ P + ED L +Y L + E+++++ LHRD
Sbjct: 305 YKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDK 364
Query: 441 EVFPRP-ELYDPDRFLSENVAGRNPYAYIPFSAGPRNCIGE 480
++ E + P+RF EN + +A+ PF G R CIG+
Sbjct: 365 TIWGDDVEEFRPERF--ENPSAIPQHAFKPFGNGQRACIGQ 403
>pdb|3DBG|A Chain A, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3DBG|B Chain B, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3EL3|A Chain A, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
pdb|3EL3|B Chain B, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
Length = 467
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 71/307 (23%), Positives = 138/307 (44%), Gaps = 20/307 (6%)
Query: 181 KQSRLVKLINRIPGPTSLPVLGNSIE--CNVDNEETAMGRKINAQDDSNSEYVKAVYEI- 237
+Q R ++ R+ ++P G +E + E G+ ++A +S V+
Sbjct: 114 RQRRTIQPAFRL---DAIPAYGPIMEEEAHALTERWQPGKTVDATSESFRVAVRVAARCL 170
Query: 238 --GSIIQKRQAKIHLQPDFLFRLSSLYKNHQRCLNTLHSF---SYKVINERKADLKARRN 292
G + +R ++ + +FR +Y+ L L+ + + N+ ADL
Sbjct: 171 LRGQYMDERAERLCVALATVFR--GMYRRMVVPLGPLYRLPLPANRRFNDALADLHLL-- 226
Query: 293 IEETMEDSAEDVKKRPAFLDLLIEASERHN--LSDENIREEVDTFMFEGHDTTSAAICWT 350
++E + + +K L L+EA + + + ++ I ++V + G +T ++ I W
Sbjct: 227 VDEIIAERRASGQKPDDLLTALLEAKDDNGDPIGEQEIHDQVVAILTPGSETIASTIMWL 286
Query: 351 LLLLGSNQEIQNKVYEEILVTSFKALHKPFTTRSLNSMKYLEACIKEALRLYPSVPFIAR 410
L L + E +++ +E+ + +P + +++ I EA+RL P+V + R
Sbjct: 287 LQALADHPEHADRIRDEVEAVTGG---RPVAFEDVRKLRHTGNVIVEAMRLRPAVWVLTR 343
Query: 411 KLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYDPDRFLSENVAGRNPYAYIPF 470
+ + L Y +P ++I Y + RDP+ + +DPDR+L E A YA PF
Sbjct: 344 RAVAESELGGYRIPAGADIIYSPYAIQRDPKSYDDNLEFDPDRWLPERAANVPKYAMKPF 403
Query: 471 SAGPRNC 477
SAG R C
Sbjct: 404 SAGKRKC 410
>pdb|1PO5|A Chain A, Structure Of Mammalian Cytochrome P450 2b4
Length = 476
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 81/166 (48%), Gaps = 6/166 (3%)
Query: 317 ASERHNLSDENIREEVDTFMFEGHDTTSAAICWTLLLLGSNQEIQNKVYEEILVTSFKAL 376
+SE H+ +N+ V + F G +TTS + + LL+ + +V +EI
Sbjct: 261 SSEFHH---QNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEI--EQVIGS 315
Query: 377 HKPFTTRSLNSMKYLEACIKEALRLYPSVPF-IARKLSEDVPLPDYVLPRDTEVIIVVYN 435
H+P M Y +A I E RL +PF + +++D YV+P++TEV V+ +
Sbjct: 316 HRPPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSS 375
Query: 436 LHRDPEVFPRPELYDPDRFLSENVAGRNPYAYIPFSAGPRNCIGES 481
DP F P ++P FL N A + ++PFS G R C+GE
Sbjct: 376 ALHDPRYFETPNTFNPGHFLDANGALKRNEGFMPFSLGKRICLGEG 421
>pdb|1SUO|A Chain A, Structure Of Mammalian Cytochrome P450 2b4 With Bound
4-(4- Chlorophenyl)imidazole
pdb|2BDM|A Chain A, Structure Of Cytochrome P450 2b4 With Bound Bifonazole
pdb|3G5N|A Chain A, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|B Chain B, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|C Chain C, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|D Chain D, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|A Chain A, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|B Chain B, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|C Chain C, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|D Chain D, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3KW4|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Ticlopidine
pdb|3ME6|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|B Chain B, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|C Chain C, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|D Chain D, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3MVR|A Chain A, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3MVR|B Chain B, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3R1A|A Chain A, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|B Chain B, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|C Chain C, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|D Chain D, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|E Chain E, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|F Chain F, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|G Chain G, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|H Chain H, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|A Chain A, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|B Chain B, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|C Chain C, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|D Chain D, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3TMZ|A Chain A, Crystal Structure Of P450 2b4(H226y) In Complex With
Amlodipine
pdb|3UAS|A Chain A, Cytochrome P450 2b4 Covalently Bound To The
Mechanism-based Inactivator 9-ethynylphenanthrene
Length = 476
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 81/166 (48%), Gaps = 6/166 (3%)
Query: 317 ASERHNLSDENIREEVDTFMFEGHDTTSAAICWTLLLLGSNQEIQNKVYEEILVTSFKAL 376
+SE H+ +N+ V + F G +TTS + + LL+ + +V +EI
Sbjct: 261 SSEFHH---QNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEI--EQVIGS 315
Query: 377 HKPFTTRSLNSMKYLEACIKEALRLYPSVPF-IARKLSEDVPLPDYVLPRDTEVIIVVYN 435
H+P M Y +A I E RL +PF + +++D YV+P++TEV V+ +
Sbjct: 316 HRPPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSS 375
Query: 436 LHRDPEVFPRPELYDPDRFLSENVAGRNPYAYIPFSAGPRNCIGES 481
DP F P ++P FL N A + ++PFS G R C+GE
Sbjct: 376 ALHDPRYFETPNTFNPGHFLDANGALKRNEGFMPFSLGKRICLGEG 421
>pdb|2Q6N|A Chain A, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|B Chain B, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|C Chain C, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|D Chain D, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|E Chain E, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|F Chain F, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|G Chain G, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
Length = 478
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 81/166 (48%), Gaps = 6/166 (3%)
Query: 317 ASERHNLSDENIREEVDTFMFEGHDTTSAAICWTLLLLGSNQEIQNKVYEEILVTSFKAL 376
+SE H+ +N+ V + F G +TTS + + LL+ + +V +EI
Sbjct: 261 SSEFHH---QNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEI--EQVIGS 315
Query: 377 HKPFTTRSLNSMKYLEACIKEALRLYPSVPF-IARKLSEDVPLPDYVLPRDTEVIIVVYN 435
H+P M Y +A I E RL +PF + +++D YV+P++TEV V+ +
Sbjct: 316 HRPPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSS 375
Query: 436 LHRDPEVFPRPELYDPDRFLSENVAGRNPYAYIPFSAGPRNCIGES 481
DP F P ++P FL N A + ++PFS G R C+GE
Sbjct: 376 ALHDPRYFETPNTFNPGHFLDANGALKRNEGFMPFSLGKRICLGEG 421
>pdb|3C6G|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3C6G|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3DL9|A Chain A, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
pdb|3DL9|B Chain B, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
Length = 479
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 80/160 (50%), Gaps = 5/160 (3%)
Query: 323 LSDENIREEVDTFMFEGHDTTSAAICWTLLLLGSNQEIQNKVYEEI-LVTSFKALHKPFT 381
S EN+ V + G +TT+ + W +L + IQ +V +EI L+ KP +
Sbjct: 269 FSKENLIFSVGELIIAGTETTTNVLRWAILFMALYPNIQGQVQKEIDLIMGPNG--KP-S 325
Query: 382 TRSLNSMKYLEACIKEALRLYPSVPF-IARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDP 440
M Y EA + E LR VP I SED + Y +P+ T VI +Y++H D
Sbjct: 326 WDDKCKMPYTEAVLHEVLRFCNIVPLGIFHATSEDAVVRGYSIPKGTTVITNLYSVHFDE 385
Query: 441 EVFPRPELYDPDRFLSENVAGRNPYAYIPFSAGPRNCIGE 480
+ + PE++ P+RFL + A +PFS G R+C+GE
Sbjct: 386 KYWRDPEVFHPERFLDSSGYFAKKEALVPFSLGRRHCLGE 425
>pdb|3CZH|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
pdb|3CZH|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
Length = 481
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 80/160 (50%), Gaps = 5/160 (3%)
Query: 323 LSDENIREEVDTFMFEGHDTTSAAICWTLLLLGSNQEIQNKVYEEI-LVTSFKALHKPFT 381
S EN+ V + G +TT+ + W +L + IQ +V +EI L+ KP +
Sbjct: 269 FSKENLIFSVGELIIAGTETTTNVLRWAILFMALYPNIQGQVQKEIDLIMGPNG--KP-S 325
Query: 382 TRSLNSMKYLEACIKEALRLYPSVPF-IARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDP 440
M Y EA + E LR VP I SED + Y +P+ T VI +Y++H D
Sbjct: 326 WDDKCKMPYTEAVLHEVLRFCNIVPLGIFHATSEDAVVRGYSIPKGTTVITNLYSVHFDE 385
Query: 441 EVFPRPELYDPDRFLSENVAGRNPYAYIPFSAGPRNCIGE 480
+ + PE++ P+RFL + A +PFS G R+C+GE
Sbjct: 386 KYWRDPEVFHPERFLDSSGYFAKKEALVPFSLGRRHCLGE 425
>pdb|3TK3|A Chain A, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|B Chain B, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|C Chain C, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|D Chain D, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
Length = 476
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 80/166 (48%), Gaps = 6/166 (3%)
Query: 317 ASERHNLSDENIREEVDTFMFEGHDTTSAAICWTLLLLGSNQEIQNKVYEEILVTSFKAL 376
+SE H+ +N+ V + F G +TTS + + LL+ + +V +EI
Sbjct: 261 SSEFHH---QNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEI--EQVIGS 315
Query: 377 HKPFTTRSLNSMKYLEACIKEALRLYPSVPF-IARKLSEDVPLPDYVLPRDTEVIIVVYN 435
H+P M Y +A I E RL +PF + +++D YV+P++TEV V+ +
Sbjct: 316 HRPPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSS 375
Query: 436 LHRDPEVFPRPELYDPDRFLSENVAGRNPYAYIPFSAGPRNCIGES 481
DP F P ++P FL N A + ++PFS G R C GE
Sbjct: 376 ALHDPRYFETPNTFNPGHFLDANGALKRNEGFMPFSLGKRICAGEG 421
>pdb|3LD6|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3LD6|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3JUS|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUS|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUV|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C
Length = 461
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 88/197 (44%), Gaps = 13/197 (6%)
Query: 287 LKARRNIEETMEDSAEDVKKRPAFLDLLIEASERHN--LSDENIREEVDTFMFEGHDTTS 344
++ RR +E ++D L L++A+ + L+D+ + + + G T+S
Sbjct: 220 IQKRRQSQEKIDD----------ILQTLLDATYKDGRPLTDDEVAGMLIGLLLAGQHTSS 269
Query: 345 AAICWTLLLLGSNQEIQNKVYEEILVTSFKALHKPFTTRSLNSMKYLEACIKEALRLYPS 404
W L ++ +Q K Y E + L P T L + L+ CIKE LRL P
Sbjct: 270 TTSAWMGFFLARDKTLQKKCYLEQKTVCGENL-PPLTYDQLKDLNLLDRCIKETLRLRPP 328
Query: 405 VPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYDPDRFLSENVAGRNP 464
+ + R + Y +P +V + R + + ++PDR+L +N A
Sbjct: 329 IMIMMRMARTPQTVAGYTIPPGHQVCVSPTVNQRLKDSWVERLDFNPDRYLQDNPASGEK 388
Query: 465 YAYIPFSAGPRNCIGES 481
+AY+PF AG CIGE+
Sbjct: 389 FAYVPFGAGRHRCIGEN 405
>pdb|3MZS|A Chain A, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|B Chain B, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|C Chain C, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|D Chain D, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
Length = 486
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 82/157 (52%), Gaps = 9/157 (5%)
Query: 326 ENIREEVDTFMFEGHDTTSAAICWTLLLLGSNQEIQNKVYEEILVTSFKALHKPFTTRSL 385
E+++ + + G +TTS + W L + + +Q + EE+L +A + ++ L
Sbjct: 275 EDVKANITEMLAGGVNTTSMTLQWHLYEMARSLNVQEMLREEVLNARRQA--EGDISKML 332
Query: 386 NSMKYLEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPR 445
+ L+A IKE LRL+P + R D+ L DY++P T V + +Y + RDP F
Sbjct: 333 QMVPLLKASIKETLRLHPISVTLQRYPESDLVLQDYLIPAKTLVQVAIYAMGRDPAFFSS 392
Query: 446 PELYDPDRFLSEN---VAGRNPYAYIPFSAGPRNCIG 479
P+ +DP R+LS++ + RN + F G R C+G
Sbjct: 393 PDKFDPTRWLSKDKDLIHFRN----LGFGWGVRQCVG 425
>pdb|4H1N|A Chain A, Crystal Structure Of P450 2b4 F297a Mutant In Complex With
Anti- Platelet Drug Clopidogrel
Length = 479
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 80/166 (48%), Gaps = 6/166 (3%)
Query: 317 ASERHNLSDENIREEVDTFMFEGHDTTSAAICWTLLLLGSNQEIQNKVYEEILVTSFKAL 376
+SE H+ +N+ V + G +TTS + + LL+ + +V +EI
Sbjct: 261 SSEFHH---QNLILTVLSLFAAGTETTSTTLRYGFLLMLKYPHVTERVQKEI--EQVIGS 315
Query: 377 HKPFTTRSLNSMKYLEACIKEALRLYPSVPF-IARKLSEDVPLPDYVLPRDTEVIIVVYN 435
H+P M Y +A I E RL +PF + +++D YV+P++TEV V+ +
Sbjct: 316 HRPPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSS 375
Query: 436 LHRDPEVFPRPELYDPDRFLSENVAGRNPYAYIPFSAGPRNCIGES 481
DP F P ++P FL N A + ++PFS G R C+GE
Sbjct: 376 ALHDPRYFETPNTFNPGHFLDANGALKRNEGFMPFSLGKRICLGEG 421
>pdb|2Q9F|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1 In Complex
With Cholesterol-3-Sulphate
pdb|2Q9G|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1
pdb|3MDM|A Chain A, Thioperamide Complex Of Cytochrome P450 46a1
pdb|3MDR|A Chain A, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDR|B Chain B, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDT|A Chain A, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDT|B Chain B, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDV|A Chain A, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|3MDV|B Chain B, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|4ENH|A Chain A, Crystal Structure Of Human Cytochrome P450 Cyp46a1 With
Fluvoxamine Bound
pdb|4FIA|A Chain A, Crystal Structure Of Human Cyp46a1 P450 With Bicalutamide
Bound
Length = 456
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 85/175 (48%), Gaps = 8/175 (4%)
Query: 308 PAFLDLLIEASERHNLSDENIREEVDTFMFEGHDTTSAAICWTLLLLGSNQEIQNKVYEE 367
PA + I +E DE + + TF GH+T++ + +T++ L EI ++ E
Sbjct: 224 PADILTQILKAEEGAQDDEGLLDNFVTFFIAGHETSANHLAFTVMELSRQPEIVARLQAE 283
Query: 368 I--LVTSFKALHKPFTTRSLNSMKYLEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPR 425
+ ++ S + L L ++YL +KE+LRLYP R L E+ + +P
Sbjct: 284 VDEVIGSKRYLD----FEDLGRLQYLSQVLKESLRLYPPAWGTFRLLEEETLIDGVRVPG 339
Query: 426 DTEVIIVVYNLHRDPEVFPRPELYDPDRFLSENVAGRNPYAYIPFSAGPRNCIGE 480
+T ++ Y + R F P ++PDRF A + + Y PFS G R+CIG+
Sbjct: 340 NTPLLFSTYVMGRMDTYFEDPLTFNPDRFGPG--APKPRFTYFPFSLGHRSCIGQ 392
Score = 30.0 bits (66), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 14/59 (23%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Query: 45 NNSRTIHKSSDYCYIEPWLGNGLLTSAGH-IWHQRRKILTPAFHFRILEDFVEVFQEQS 102
N ++++ + E G GL++ + WH++R+++ AF L +E F E++
Sbjct: 55 NKDSKMYRALQTVFGERLFGQGLVSECNYERWHKQRRVIDLAFSRSSLVSLMETFNEKA 113
>pdb|1DT6|A Chain A, Structure Of Mammalian Cytochrome P450 2c5
pdb|1N6B|A Chain A, Microsomal Cytochrome P450 2c5/3lvdh Complex With A
Dimethyl Derivative Of Sulfaphenazole
pdb|1NR6|A Chain A, Microsomal Cytochrome P450 2c53LVDH COMPLEX WITH
DICLOFENAC
Length = 473
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 94/183 (51%), Gaps = 6/183 (3%)
Query: 303 DVKKRPAFLD-LLIEASERHNL--SDENIREEVDTFMFEGHDTTSAAICWTLLLLGSNQE 359
DV F+D LI+ + +NL + E++ V G +TTS + ++LLLL + E
Sbjct: 238 DVNNPRDFIDCFLIKMEQENNLEFTLESLVIAVSDLFGAGTETTSTTLRYSLLLLLKHPE 297
Query: 360 IQNKVYEEILVTSFKALHKPFTTRSLNSMKYLEACIKEALRLYPSVPF-IARKLSEDVPL 418
+ +V EEI H+ + + M Y +A I E R +P + ++ DV
Sbjct: 298 VAARVQEEI--ERVIGRHRSPCMQDRSRMPYTDAVIHEIQRFIDLLPTNLPHAVTRDVRF 355
Query: 419 PDYVLPRDTEVIIVVYNLHRDPEVFPRPELYDPDRFLSENVAGRNPYAYIPFSAGPRNCI 478
+Y +P+ T++I + ++ D + FP P+++DP FL E+ + ++PFSAG R C+
Sbjct: 356 RNYFIPKGTDIITSLTSVLHDEKAFPNPKVFDPGHFLDESGNFKKSDYFMPFSAGKRMCV 415
Query: 479 GES 481
GE
Sbjct: 416 GEG 418
>pdb|3QM4|A Chain A, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3QM4|B Chain B, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3TBG|A Chain A, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|B Chain B, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|C Chain C, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|D Chain D, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TDA|A Chain A, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|B Chain B, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|C Chain C, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|D Chain D, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
Length = 479
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 79/160 (49%), Gaps = 3/160 (1%)
Query: 322 NLSDENIREEVDTFMFEGHDTTSAAICWTLLLLGSNQEIQNKVYEEILVTSFKALHKPFT 381
+ +DEN+R V G TTS + W LLL+ + ++Q +V +EI + +P
Sbjct: 267 SFNDENLRIVVADLFSAGMVTTSTTLAWGLLLMILHPDVQRRVQQEI-DDVIGQVRRPEM 325
Query: 382 TRSLNSMKYLEACIKEALRLYPSVPF-IARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDP 440
+ M Y A I E R VP + S D+ + + +P+ T +I + ++ +D
Sbjct: 326 GDQAH-MPYTTAVIHEVQRFGDIVPLGVTHMTSRDIEVQGFRIPKGTTLITNLSSVLKDE 384
Query: 441 EVFPRPELYDPDRFLSENVAGRNPYAYIPFSAGPRNCIGE 480
V+ +P + P+ FL P A++PFSAG R C+GE
Sbjct: 385 AVWEKPFRFHPEHFLDAQGHFVKPEAFLPFSAGRRACLGE 424
>pdb|3E4E|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E4E|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E6I|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3E6I|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3GPH|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3GPH|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3KOH|A Chain A, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3KOH|B Chain B, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3LC4|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3LC4|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3T3Z|A Chain A, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|B Chain B, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|C Chain C, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|D Chain D, Human Cytochrome P450 2e1 In Complex With Pilocarpine
Length = 476
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 105/237 (44%), Gaps = 28/237 (11%)
Query: 261 LYKNHQRCLNTLHSFSYKVINERKADLKARRNIEETMEDSAEDVKKRPAFLD-------- 312
LY N L+ L KVI +N+ E E +E VK+ LD
Sbjct: 196 LYNNFPSFLHYLPGSHRKVI----------KNVAEVKEYVSERVKEHHQSLDPNCPRDLT 245
Query: 313 --LLIEA-SERHN----LSDENIREEVDTFMFEGHDTTSAAICWTLLLLGSNQEIQNKVY 365
LL+E E+H+ + + I V F G +TTS + + LL+L EI+ K++
Sbjct: 246 DCLLVEMEKEKHSAERLYTMDGITVTVADLFFAGTETTSTTLRYGLLILMKYPEIEEKLH 305
Query: 366 EEILVTSFKALHKPFTTRSLNSMKYLEACIKEALRLYPSVPF-IARKLSEDVPLPDYVLP 424
EEI + + M Y++A + E R VP + + + D Y++P
Sbjct: 306 EEI--DRVIGPSRIPAIKDRQEMPYMDAVVHEIQRFITLVPSNLPHEATRDTIFRGYLIP 363
Query: 425 RDTEVIIVVYNLHRDPEVFPRPELYDPDRFLSENVAGRNPYAYIPFSAGPRNCIGES 481
+ T V+ + ++ D + FP PE + P+ FL+EN + + PFS G R C GE
Sbjct: 364 KGTVVVPTLDSVLYDNQEFPDPEKFKPEHFLNENGKFKYSDYFKPFSTGKRVCAGEG 420
>pdb|2F9Q|A Chain A, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|B Chain B, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|C Chain C, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|D Chain D, Crystal Structure Of Human Cytochrome P450 2d6
Length = 479
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 79/160 (49%), Gaps = 3/160 (1%)
Query: 322 NLSDENIREEVDTFMFEGHDTTSAAICWTLLLLGSNQEIQNKVYEEILVTSFKALHKPFT 381
+ +DEN+R V G TTS + W LLL+ + ++Q +V +EI + +P
Sbjct: 267 SFNDENLRIVVADLFSAGMVTTSTTLAWGLLLMILHPDVQRRVQQEI-DDVIGQVRRPEM 325
Query: 382 TRSLNSMKYLEACIKEALRLYPSVPF-IARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDP 440
+ M Y A I E R VP + S D+ + + +P+ T +I + ++ +D
Sbjct: 326 GDQAH-MPYTTAVIHEVQRFGDIVPLGMTHMTSRDIEVQGFRIPKGTTLITNLSSVLKDE 384
Query: 441 EVFPRPELYDPDRFLSENVAGRNPYAYIPFSAGPRNCIGE 480
V+ +P + P+ FL P A++PFSAG R C+GE
Sbjct: 385 AVWEKPFRFHPEHFLDAQGHFVKPEAFLPFSAGRRACLGE 424
>pdb|4I8V|A Chain A, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|B Chain B, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|C Chain C, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|D Chain D, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
Length = 491
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 78/162 (48%), Gaps = 5/162 (3%)
Query: 323 LSDENIREEVDTFMFEGHDTTSAAICWTLLLLGSNQEIQNKVYEEILVTSFKALHKPFTT 382
LSDE I V G DT + AI W+L+ L N +Q K+ EE+ ++ +
Sbjct: 275 LSDEKIINIVLDLFGAGFDTVTTAISWSLMYLVMNPRVQRKIQEELDTVIGRSRRPRLSD 334
Query: 383 RSLNSMKYLEACIKEALRLYPSVPF-IARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPE 441
RS + Y+EA I E R VPF I + D L + +P+ V + + ++ D +
Sbjct: 335 RS--HLPYMEAFILETFRHSSFVPFTIPHSTTRDTSLKGFYIPKGRCVFVNQWQINHDQK 392
Query: 442 VFPRPELYDPDRFLSENVAGRNPYA--YIPFSAGPRNCIGES 481
++ P + P+RFL+ + A + I F G R CIGE+
Sbjct: 393 LWVNPSEFLPERFLTPDGAIDKVLSEKVIIFGMGKRKCIGET 434
>pdb|1R9O|A Chain A, Crystal Structure Of P4502c9 With Flurbiprofen Bound
Length = 477
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 92/187 (49%), Gaps = 11/187 (5%)
Query: 303 DVKKRPAFLD--LLIEASERHNLSDENIREE-----VDTFMFEGHDTTSAAICWTLLLLG 355
D+ F+D L+ E+HN E E VD F G +TTS + + LLLL
Sbjct: 239 DMNNPQDFIDCFLMKMEKEKHNQPSEFTIESLENTAVDLFG-AGTETTSTTLRYALLLLL 297
Query: 356 SNQEIQNKVYEEILVTSFKALHKPFTTRSLNSMKYLEACIKEALRLYPSVPF-IARKLSE 414
+ E+ KV EEI + RS M Y +A + E R +P + ++
Sbjct: 298 KHPEVTAKVQEEIERVIGRNRSPCMQDRS--HMPYTDAVVHEVQRYIDLLPTSLPHAVTC 355
Query: 415 DVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYDPDRFLSENVAGRNPYAYIPFSAGP 474
D+ +Y++P+ T ++I + ++ D + FP PE++DP FL E + ++PFSAG
Sbjct: 356 DIKFRNYLIPKGTTILISLTSVLHDNKEFPNPEMFDPHHFLDEGGNFKKSKYFMPFSAGK 415
Query: 475 RNCIGES 481
R C+GE+
Sbjct: 416 RICVGEA 422
>pdb|1PQ2|A Chain A, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|1PQ2|B Chain B, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|2NNH|A Chain A, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNH|B Chain B, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNI|A Chain A, Cyp2c8dh Complexed With Montelukast
pdb|2NNJ|A Chain A, Cyp2c8dh Complexed With Felodipine
pdb|2VN0|A Chain A, Cyp2c8dh Complexed With Troglitazone
Length = 476
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 93/196 (47%), Gaps = 10/196 (5%)
Query: 294 EETMEDSAE-DVKKRPAFLDLLI------EASERHNLSDENIREEVDTFMFEGHDTTSAA 346
E+ E A DV F+D + + +++ + EN+ V G +TTS
Sbjct: 228 EKVKEHQASLDVNNPRDFIDCFLIKMEQEKDNQKSEFNIENLVGTVADLFVAGTETTSTT 287
Query: 347 ICWTLLLLGSNQEIQNKVYEEILVTSFKALHKPFTTRSLNSMKYLEACIKEALRLYPSVP 406
+ + LLLL + E+ KV EEI H+ + + M Y +A + E R VP
Sbjct: 288 LRYGLLLLLKHPEVTAKVQEEI--DHVIGRHRSPCMQDRSHMPYTDAVVHEIQRYSDLVP 345
Query: 407 -FIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYDPDRFLSENVAGRNPY 465
+ ++ D +Y++P+ T ++ ++ ++ D + FP P ++DP FL +N +
Sbjct: 346 TGVPHAVTTDTKFRNYLIPKGTTIMALLTSVLHDDKEFPNPNIFDPGHFLDKNGNFKKSD 405
Query: 466 AYIPFSAGPRNCIGES 481
++PFSAG R C GE
Sbjct: 406 YFMPFSAGKRICAGEG 421
>pdb|1OG2|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG2|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
Length = 475
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 92/187 (49%), Gaps = 11/187 (5%)
Query: 303 DVKKRPAFLD--LLIEASERHNLSDENIREE-----VDTFMFEGHDTTSAAICWTLLLLG 355
D+ F+D L+ E+HN E E VD F G +TTS + + LLLL
Sbjct: 237 DMNNPQDFIDCFLMKMEKEKHNQPSEFTIESLENTAVDLFG-AGTETTSTTLRYALLLLL 295
Query: 356 SNQEIQNKVYEEILVTSFKALHKPFTTRSLNSMKYLEACIKEALRLYPSVPF-IARKLSE 414
+ E+ KV EEI + RS M Y +A + E R +P + ++
Sbjct: 296 KHPEVTAKVQEEIERVIGRNRSPCMQDRS--HMPYTDAVVHEVQRYIDLLPTSLPHAVTC 353
Query: 415 DVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYDPDRFLSENVAGRNPYAYIPFSAGP 474
D+ +Y++P+ T ++I + ++ D + FP PE++DP FL E + ++PFSAG
Sbjct: 354 DIKFRNYLIPKGTTILISLTSVLHDNKEFPNPEMFDPHHFLDEGGNFKKSKYFMPFSAGK 413
Query: 475 RNCIGES 481
R C+GE+
Sbjct: 414 RICVGEA 420
>pdb|3KHM|A Chain A, Crystal Structure Of Sterol 14alpha-Demethylase (Cyp51)
From Trypanosoma Cruzi In Complex With Inhibitor
Fluconazole
Length = 464
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 80/160 (50%), Gaps = 12/160 (7%)
Query: 336 MFEGHDTTSAAICWTLLLL--GSNQEIQNKVYEEILVTSFKALHKPFTTRSLNSMKYLEA 393
MF G T++ W++L L N++ +K+++EI F A ++ M + E
Sbjct: 266 MFAGQHTSTITTSWSMLHLMHPKNKKWLDKLHKEI--DEFPAQLN--YDNVMDEMPFAER 321
Query: 394 CIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYDPDR 453
C++E++R P + + R + +V + YV+P+ + H D E FP P L+DP+R
Sbjct: 322 CVRESIRRDPPLLMVMRMVKAEVKVGSYVVPKGDIIACSPLLSHHDEEAFPNPRLWDPER 381
Query: 454 FLSENVAGRNPYAYIPFSAGPRNCIGESEILEREQRKVAT 493
E V G A+I F AG CIG+ L + + +AT
Sbjct: 382 --DEKVDG----AFIGFGAGVHKCIGQKFALLQVKTILAT 415
>pdb|3K1O|A Chain A, Crystal Structure Of Sterol 14-alpha Demethylase (cyp51)
From Trypanosoma Cruzi In Complex With A Potential
Antichagasic Drug, Posaconazole
pdb|3KSW|A Chain A, Crystal Structure Of Sterol 14alpha-demethylase (cyp51)
From Trypanosoma Cruzi In Complex With An Inhibitor Vnf
((4-(4-
Chlorophenyl)-n-[2-(1h-imidazol-1-yl)-1-
phenylethyl]benzamide)
Length = 458
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 80/160 (50%), Gaps = 12/160 (7%)
Query: 336 MFEGHDTTSAAICWTLLLL--GSNQEIQNKVYEEILVTSFKALHKPFTTRSLNSMKYLEA 393
MF G T++ W++L L N++ +K+++EI F A ++ M + E
Sbjct: 260 MFAGQHTSTITTSWSMLHLMHPKNKKWLDKLHKEI--DEFPAQLN--YDNVMDEMPFAER 315
Query: 394 CIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYDPDR 453
C++E++R P + + R + +V + YV+P+ + H D E FP P L+DP+R
Sbjct: 316 CVRESIRRDPPLLMVMRMVKAEVKVGSYVVPKGDIIACSPLLSHHDEEAFPNPRLWDPER 375
Query: 454 FLSENVAGRNPYAYIPFSAGPRNCIGESEILEREQRKVAT 493
E V G A+I F AG CIG+ L + + +AT
Sbjct: 376 --DEKVDG----AFIGFGAGVHKCIGQKFALLQVKTILAT 409
>pdb|2WUZ|A Chain A, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex
With Fluconazole In Alternative Conformation
pdb|2WUZ|B Chain B, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex
With Fluconazole In Alternative Conformation
pdb|2WX2|A Chain A, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Cruzi In Complex With Fluconazole
pdb|2WX2|B Chain B, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Cruzi In Complex With Fluconazole
Length = 473
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 80/160 (50%), Gaps = 12/160 (7%)
Query: 336 MFEGHDTTSAAICWTLLLL--GSNQEIQNKVYEEILVTSFKALHKPFTTRSLNSMKYLEA 393
MF G T++ W++L L N++ +K+++EI F A ++ M + E
Sbjct: 275 MFAGQHTSTITTSWSMLHLMHPKNKKWLDKLHKEI--DEFPAQLN--YDNVMDEMPFAER 330
Query: 394 CIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYDPDR 453
C++E++R P + + R + +V + YV+P+ + H D E FP P L+DP+R
Sbjct: 331 CVRESIRRDPPLLMVMRMVKAEVKVGSYVVPKGDIIACSPLLSHHDEEAFPNPRLWDPER 390
Query: 454 FLSENVAGRNPYAYIPFSAGPRNCIGESEILEREQRKVAT 493
E V G A+I F AG CIG+ L + + +AT
Sbjct: 391 --DEKVDG----AFIGFGAGVHKCIGQKFALLQVKTILAT 424
>pdb|2HI4|A Chain A, Crystal Structure Of Human Microsomal P450 1a2 In Complex
With Alpha-Naphthoflavone
Length = 495
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 77/162 (47%), Gaps = 6/162 (3%)
Query: 323 LSDENIREEVDTFMFEGHDTTSAAICWTLLLLGSNQEIQNKVYEEILVTSFKALHKPFTT 382
+ E I V+ G DT + AI W+L+ L + EIQ K+ +E+ + +
Sbjct: 278 IPQEKIVNLVNDIFGAGFDTVTTAISWSLMYLVTKPEIQRKIQKELDTVIGRERRPRLSD 337
Query: 383 RSLNSMKYLEACIKEALRLYPSVPF-IARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPE 441
R + YLEA I E R +PF I + D L + +P+ V + + ++ DPE
Sbjct: 338 RP--QLPYLEAFILETFRHSSFLPFTIPHSTTRDTTLNGFYIPKKCCVFVNQWQVNHDPE 395
Query: 442 VFPRPELYDPDRFL-SENVAGRNPYA--YIPFSAGPRNCIGE 480
++ P + P+RFL ++ A P + + F G R CIGE
Sbjct: 396 LWEDPSEFRPERFLTADGTAINKPLSEKMMLFGMGKRRCIGE 437
>pdb|4GQS|A Chain A, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|B Chain B, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|C Chain C, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|D Chain D, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
Length = 477
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 82/165 (49%), Gaps = 3/165 (1%)
Query: 318 SERHNLSDENIREEVDTFMFEGHDTTSAAICWTLLLLGSNQEIQNKVYEEILVTSFKALH 377
+++ + EN+ + G +TTS + + LLLL + E+ KV EEI +
Sbjct: 260 NQQSEFTIENLVITAADLLGAGTETTSTTLRYALLLLLKHPEVTAKVQEEI--ERVVGRN 317
Query: 378 KPFTTRSLNSMKYLEACIKEALRLYPSVPF-IARKLSEDVPLPDYVLPRDTEVIIVVYNL 436
+ + M Y +A + E R +P + ++ DV +Y++P+ T ++ + ++
Sbjct: 318 RSPCMQDRGHMPYTDAVVHEVQRYIDLIPTSLPHAVTCDVKFRNYLIPKGTTILTSLTSV 377
Query: 437 HRDPEVFPRPELYDPDRFLSENVAGRNPYAYIPFSAGPRNCIGES 481
D + FP PE++DP FL E + ++PFSAG R C+GE
Sbjct: 378 LHDNKEFPNPEMFDPRHFLDEGGNFKKSNYFMPFSAGKRICVGEG 422
>pdb|3GW9|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
Length = 450
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 67/145 (46%), Gaps = 8/145 (5%)
Query: 336 MFEGHDTTSAAICWTLLLLGSNQEIQNKVYEEILVTSFKALHKPFTTRSLNSMKYLEACI 395
MF G T+S W++L L +++ + F A ++ M + E C
Sbjct: 262 MFAGQHTSSITTTWSMLHLMHPANVKHLEALRKEIEEFPAQLN--YNNVMDEMPFAERCA 319
Query: 396 KEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYDPDRFL 455
+E++R P + + RK+ DV + YV+P+ + H D E FP P +DP+R
Sbjct: 320 RESIRRDPPLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPER-- 377
Query: 456 SENVAGRNPYAYIPFSAGPRNCIGE 480
E V G A+I F AG CIG+
Sbjct: 378 DEKVEG----AFIGFGAGVHKCIGQ 398
>pdb|3G1Q|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
Length = 450
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 67/145 (46%), Gaps = 8/145 (5%)
Query: 336 MFEGHDTTSAAICWTLLLLGSNQEIQNKVYEEILVTSFKALHKPFTTRSLNSMKYLEACI 395
MF G T+S W++L L +++ + F A ++ M + E C
Sbjct: 263 MFAGQHTSSITTTWSMLHLMHPANVKHLEALRKEIEEFPAQLN--YNNVMDEMPFAERCA 320
Query: 396 KEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYDPDRFL 455
+E++R P + + RK+ DV + YV+P+ + H D E FP P +DP+R
Sbjct: 321 RESIRRDPPLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPER-- 378
Query: 456 SENVAGRNPYAYIPFSAGPRNCIGE 480
E V G A+I F AG CIG+
Sbjct: 379 DEKVEG----AFIGFGAGVHKCIGQ 399
>pdb|3TIK|A Chain A, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|B Chain B, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|C Chain C, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|D Chain D, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
Length = 454
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 67/145 (46%), Gaps = 8/145 (5%)
Query: 336 MFEGHDTTSAAICWTLLLLGSNQEIQNKVYEEILVTSFKALHKPFTTRSLNSMKYLEACI 395
MF G T+S W++L L +++ + F A ++ M + E C
Sbjct: 262 MFAGQHTSSITTTWSMLHLMHPANVKHLEALRKEIEEFPAQLN--YNNVMDEMPFAERCA 319
Query: 396 KEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYDPDRFL 455
+E++R P + + RK+ DV + YV+P+ + H D E FP P +DP+R
Sbjct: 320 RESIRRDPPLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPER-- 377
Query: 456 SENVAGRNPYAYIPFSAGPRNCIGE 480
E V G A+I F AG CIG+
Sbjct: 378 DEKVEG----AFIGFGAGVHKCIGQ 398
>pdb|2WV2|A Chain A, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Brucei In Complex With Fluconazole
Length = 475
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 67/145 (46%), Gaps = 8/145 (5%)
Query: 336 MFEGHDTTSAAICWTLLLLGSNQEIQNKVYEEILVTSFKALHKPFTTRSLNSMKYLEACI 395
MF G T+S W++L L +++ + F A ++ M + E C
Sbjct: 275 MFAGQHTSSITTTWSMLHLMHPANVKHLEALRKEIEEFPAQLN--YNNVMDEMPFAERCA 332
Query: 396 KEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYDPDRFL 455
+E++R P + + RK+ DV + YV+P+ + H D E FP P +DP+R
Sbjct: 333 RESIRRDPPLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPER-- 390
Query: 456 SENVAGRNPYAYIPFSAGPRNCIGE 480
E V G A+I F AG CIG+
Sbjct: 391 DEKVEG----AFIGFGAGVHKCIGQ 411
>pdb|3P99|A Chain A, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|B Chain B, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|C Chain C, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|D Chain D, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
Length = 453
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 67/145 (46%), Gaps = 8/145 (5%)
Query: 336 MFEGHDTTSAAICWTLLLLGSNQEIQNKVYEEILVTSFKALHKPFTTRSLNSMKYLEACI 395
MF G T+S W++L L +++ + F A ++ M + E C
Sbjct: 261 MFAGQHTSSITTTWSMLHLMHPANVKHLEALRKEIEEFPAQLN--YNNVMDEMPFAERCA 318
Query: 396 KEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYDPDRFL 455
+E++R P + + RK+ DV + YV+P+ + H D E FP P +DP+R
Sbjct: 319 RESIRRDPPLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPER-- 376
Query: 456 SENVAGRNPYAYIPFSAGPRNCIGE 480
E V G A+I F AG CIG+
Sbjct: 377 DEKVEG----AFIGFGAGVHKCIGQ 397
>pdb|2X2N|A Chain A, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|B Chain B, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|C Chain C, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|D Chain D, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
Length = 475
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 67/145 (46%), Gaps = 8/145 (5%)
Query: 336 MFEGHDTTSAAICWTLLLLGSNQEIQNKVYEEILVTSFKALHKPFTTRSLNSMKYLEACI 395
MF G T+S W++L L +++ + F A ++ M + E C
Sbjct: 275 MFAGQHTSSITTTWSMLHLMHPANVKHLEALRKEIEEFPAQLN--YNNVMDEMPFAERCA 332
Query: 396 KEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYDPDRFL 455
+E++R P + + RK+ DV + YV+P+ + H D E FP P +DP+R
Sbjct: 333 RESIRRDPPLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPER-- 390
Query: 456 SENVAGRNPYAYIPFSAGPRNCIGE 480
E V G A+I F AG CIG+
Sbjct: 391 DEKVEG----AFIGFGAGVHKCIGQ 411
>pdb|1WIY|A Chain A, Crystal Structure Analysis Of A 6-Coordinated Cytochorome
P450 From Thermus Thermophilus Hb8
pdb|1WIY|B Chain B, Crystal Structure Analysis Of A 6-Coordinated Cytochorome
P450 From Thermus Thermophilus Hb8
Length = 389
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 70/158 (44%), Gaps = 24/158 (15%)
Query: 322 NLSDENIREEVDTFMFEGHDTTSAAICWTLLLLGSNQEIQNKVYEEILVTSFKALHKPFT 381
+L E E T + GH+T ++A+ W+ LLL + Q +V
Sbjct: 205 HLPRERALSEAVTLLVAGHETVASALTWSFLLLSHRPDWQKRVA---------------- 248
Query: 382 TRSLNSMKYLEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPE 441
S + A +EALRLYP + R+L + L + LP+ T +++ Y R
Sbjct: 249 ----ESEEAALAAFQEALRLYPPAWILTRRLERPLLLGEDRLPQGTTLVLSPYVTQR--L 302
Query: 442 VFPRPELYDPDRFLSENVAGRNPYAYIPFSAGPRNCIG 479
FP E + P+RFL+E G Y PF G R C+G
Sbjct: 303 YFPEGEAFQPERFLAER--GTPSGRYFPFGLGQRLCLG 338
Score = 28.9 bits (63), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 31/71 (43%), Gaps = 1/71 (1%)
Query: 32 LILRPQDGIRPILNNSRTIHKSSDYCYIEPWLGNGLLTSAGHIWHQRRKILTPAFHFRIL 91
LI P +G+ L T + Y + G GLLT G W + RK L F + +
Sbjct: 45 LIFDP-EGVEGALLAEGTTKATFQYRALSRLTGRGLLTDWGKSWKEARKALKDPFLPKSV 103
Query: 92 EDFVEVFQEQS 102
+ E +E++
Sbjct: 104 RGYREAMEEEA 114
>pdb|3QZ1|A Chain A, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|B Chain B, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|C Chain C, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|D Chain D, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
Length = 496
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 72/152 (47%), Gaps = 7/152 (4%)
Query: 332 VDTFMFEGHDTTSAAICWTLLLLGSNQEIQNKVYEEI-LVTSFKALHKPFTTRSLNSMKY 390
VD F+ G +TT++ + W + L + EIQ ++ EE+ A T + +
Sbjct: 285 VDLFI-GGTETTASTLSWAVAFLLHHPEIQRRLQEELDRELGPGASCSRVTYKDRARLPL 343
Query: 391 LEACIKEALRLYPSVPF-IARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELY 449
L A I E LRL P VP + + + + Y +P VI + H D V+ +P +
Sbjct: 344 LNATIAEVLRLRPVVPLALPHRTTRPSSIFGYDIPEGMVVIPNLQGAHLDETVWEQPHEF 403
Query: 450 DPDRFLSENVAGRNPYAYIPFSAGPRNCIGES 481
PDRFL G NP A + F G R C+GES
Sbjct: 404 RPDRFLE---PGANPSA-LAFGCGARVCLGES 431
>pdb|3PM0|A Chain A, Structural Characterization Of The Complex Between Alpha-
Naphthoflavone And Human Cytochrome P450 1b1 (Cyp1b1)
Length = 507
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 83/184 (45%), Gaps = 17/184 (9%)
Query: 311 LDLLIEASERHNLSD----------ENIREEVDTFMFEGHDTTSAAICWTLLLLGSNQEI 360
+D I ++E+ D EN+ + DT S A+ W LLL ++
Sbjct: 253 MDAFILSAEKKAAGDSHGGGARLDLENVPATITDIFGASQDTLSTALQWLLLLFTRYPDV 312
Query: 361 QNKVYEEI-LVTSFKALHKPFTTRSLNSMKYLEACIKEALRLYPSVPF-IARKLSEDVPL 418
Q +V E+ V L P N + Y+ A + EA+R VP I + + +
Sbjct: 313 QTRVQAELDQVVGRDRL--PCMGDQPN-LPYVLAFLYEAMRFSSFVPVTIPHATTANTSV 369
Query: 419 PDYVLPRDTEVIIVVYNLHRDPEVFPRPELYDPDRFLSEN--VAGRNPYAYIPFSAGPRN 476
Y +P+DT V + ++++ DP +P PE +DP RFL ++ + + FS G R
Sbjct: 370 LGYHIPKDTVVFVNQWSVNHDPLKWPNPENFDPARFLDKDGLINKDLTSRVMIFSVGKRR 429
Query: 477 CIGE 480
CIGE
Sbjct: 430 CIGE 433
>pdb|1N97|A Chain A, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
pdb|1N97|B Chain B, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
Length = 389
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 69/161 (42%), Gaps = 30/161 (18%)
Query: 322 NLSDENIREEVDTFMFEGHDTTSAAICWTLLLLGSNQEIQNKVYEEILVTSFKALHKPFT 381
+L E E T + GH+T ++A+ W+ LLL + Q +V
Sbjct: 205 HLPRERALSEAVTLLVAGHETVASALTWSFLLLSHRPDWQKRVA---------------- 248
Query: 382 TRSLNSMKYLEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVY---NLHR 438
S + A +EALRLYP + R+L + L + LP T +++ Y LH
Sbjct: 249 ----ESEEAALAAFQEALRLYPPAWILTRRLERPLLLGEDRLPPGTTLVLSPYVTQRLH- 303
Query: 439 DPEVFPRPELYDPDRFLSENVAGRNPYAYIPFSAGPRNCIG 479
FP E + P+RFL E G Y PF G R C+G
Sbjct: 304 ----FPDGEAFRPERFLEER--GTPSGRYFPFGLGQRLCLG 338
Score = 28.5 bits (62), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 31/71 (43%), Gaps = 1/71 (1%)
Query: 32 LILRPQDGIRPILNNSRTIHKSSDYCYIEPWLGNGLLTSAGHIWHQRRKILTPAFHFRIL 91
LI P+ G+ L T + Y + G GLLT G W + RK L F + +
Sbjct: 45 LIFDPE-GVEGALLAEGTTKATFQYRALSRLTGRGLLTDWGESWKEARKALKDPFLPKNV 103
Query: 92 EDFVEVFQEQS 102
+ E +E++
Sbjct: 104 RGYREAMEEEA 114
>pdb|3L4D|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
Length = 453
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 80/173 (46%), Gaps = 11/173 (6%)
Query: 323 LSDENIREEVDTFMFEGHDTTSAAICWTLLLLGS--NQEIQNKVYEEILVTSFKALHKPF 380
+S + + MF G T++ W+LL L N+ K+++EI F A
Sbjct: 248 MSQHEVCGMIVAAMFAGQHTSTITTTWSLLHLMDPRNKRHLAKLHQEI--DEFPAQLN-- 303
Query: 381 TTRSLNSMKYLEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDP 440
+ M + E C +E++R P + + RK+ + V + YV+P + H+D
Sbjct: 304 YDNVMEEMPFAEQCARESIRRDPPLVMLMRKVLKPVQVGKYVVPEGDIIACSPLLSHQDE 363
Query: 441 EVFPRPELYDPDRFLSENVAGRNPYAYIPFSAGPRNCIGESEILEREQRKVAT 493
E FP P ++P+R + + V G A+ F AG CIGE L + + +AT
Sbjct: 364 EAFPNPREWNPERNM-KLVDG----AFCGFGAGVHKCIGEKFGLLQVKTVLAT 411
>pdb|1U13|A Chain A, Crystal Structure Analysis Of The C37lC151TC442A-Triple
Mutant Of Cyp51 From Mycobacterium Tuberculosis
Length = 455
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 69/151 (45%), Gaps = 7/151 (4%)
Query: 334 TFMFEGHDTTSAAICWTLLLLGSNQEIQNKVYEEILVTSFKALHKPFTTRSLNSMKYLEA 393
+ MF GH T+S WTL+ L +++ V +E+ + + +L + LE
Sbjct: 252 SMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDEL--DELYGDGRSVSFHALRQIPQLEN 309
Query: 394 CIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYDPDR 453
+KE LRL+P + + R + + + + V +R PE FP P + P R
Sbjct: 310 VLKETLRLHPPLIILMRVAKGEFEVQGHRIHEGDLVAASPAISNRIPEDFPDPHDFVPAR 369
Query: 454 F---LSENVAGRNPYAYIPFSAGPRNCIGES 481
+ E++ R + +IPF AG C+G +
Sbjct: 370 YEQPRQEDLLNR--WTWIPFGAGRHRCVGAA 398
>pdb|2W0A|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor
N-[(1s)-2-Methyl-1-(Pyridin-4-Ylcarbamoyl)propyl]
Cyclohexanecarboxamide
Length = 455
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 69/151 (45%), Gaps = 7/151 (4%)
Query: 334 TFMFEGHDTTSAAICWTLLLLGSNQEIQNKVYEEILVTSFKALHKPFTTRSLNSMKYLEA 393
+ MF GH T+S WTL+ L +++ V +E+ + + +L + LE
Sbjct: 252 SMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDEL--DELYGDGRSVSFHALRQIPQLEN 309
Query: 394 CIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYDPDR 453
+KE LRL+P + + R + + + + V +R PE FP P + P R
Sbjct: 310 VLKETLRLHPPLIILMRVAKGEFEVQGHRIHEGDLVAASPAISNRIPEDFPDPHDFVPAR 369
Query: 454 F---LSENVAGRNPYAYIPFSAGPRNCIGES 481
+ E++ R + +IPF AG C+G +
Sbjct: 370 YEQPRQEDLLNR--WTWIPFGAGRHRCVGAA 398
>pdb|1X8V|A Chain A, Estriol-Bound And Ligand-Free Structures Of Sterol
14alpha- Demethylase (Cyp51)
pdb|2BZ9|A Chain A, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2BZ9|B Chain B, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2CI0|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2CIB|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2VKU|A Chain A, 4,4'-Dihydroxybenzophenone Mimics Sterol Substrate In The
Binding Site Of Sterol 14alpha-Demethylase (Cyp51) In
The X-Ray Structure Of The Complex
pdb|2W09|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor Cis-4-
Methyl-N-[(1s)-3-(Methylsulfanyl)-1-(Pyridin-4-
Ylcarbamoyl)propyl]cyclohexanecarboxamide
pdb|2W0B|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor 3-{[(4-
Methylphenyl)sulfonyl]amino}propyl Pyridin-4-Ylcarbamate
Length = 455
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 69/151 (45%), Gaps = 7/151 (4%)
Query: 334 TFMFEGHDTTSAAICWTLLLLGSNQEIQNKVYEEILVTSFKALHKPFTTRSLNSMKYLEA 393
+ MF GH T+S WTL+ L +++ V +E+ + + +L + LE
Sbjct: 252 SMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDEL--DELYGDGRSVSFHALRQIPQLEN 309
Query: 394 CIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYDPDR 453
+KE LRL+P + + R + + + + V +R PE FP P + P R
Sbjct: 310 VLKETLRLHPPLIILMRVAKGEFEVQGHRIHEGDLVAASPAISNRIPEDFPDPHDFVPAR 369
Query: 454 F---LSENVAGRNPYAYIPFSAGPRNCIGES 481
+ E++ R + +IPF AG C+G +
Sbjct: 370 YEQPRQEDLLNR--WTWIPFGAGRHRCVGAA 398
>pdb|1EA1|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With Fluconazole
pdb|1E9X|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With 4-
Phenylimidazole
pdb|1H5Z|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Ferric Low-Spin State
Length = 455
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 69/151 (45%), Gaps = 7/151 (4%)
Query: 334 TFMFEGHDTTSAAICWTLLLLGSNQEIQNKVYEEILVTSFKALHKPFTTRSLNSMKYLEA 393
+ MF GH T+S WTL+ L +++ V +E+ + + +L + LE
Sbjct: 252 SMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDEL--DELYGDGRSVSFHALRQIPQLEN 309
Query: 394 CIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYDPDR 453
+KE LRL+P + + R + + + + V +R PE FP P + P R
Sbjct: 310 VLKETLRLHPPLIILMRVAKGEFEVQGHRIHEGDLVAASPAISNRIPEDFPDPHDFVPAR 369
Query: 454 F---LSENVAGRNPYAYIPFSAGPRNCIGES 481
+ E++ R + +IPF AG C+G +
Sbjct: 370 YEQPRQEDLLNR--WTWIPFGAGRHRCVGAA 398
>pdb|3DAX|A Chain A, Crystal Structure Of Human Cyp7a1
pdb|3DAX|B Chain B, Crystal Structure Of Human Cyp7a1
Length = 491
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 65/158 (41%), Gaps = 22/158 (13%)
Query: 343 TSAAICWTLLLLGSNQEIQNKVYEEILVTSFKALHK--------PFTTRSLNSMKYLEAC 394
T A W+L + N E EE+ T A K + LN + L++
Sbjct: 273 TIPATFWSLFQMIRNPEAMKAATEEVKRTLENAGQKVSLEGNPICLSQAELNDLPVLDSI 332
Query: 395 IKEALRLYPSVPFIARKLSEDVPL----PDYVLPRDTEVIIVVYNLHRDPEVFPRPELYD 450
IKE+LRL S R ED L Y + +D + + +H DPE++P P +
Sbjct: 333 IKESLRL-SSASLNIRTAKEDFTLHLEDGSYNIRKDDIIALYPQLMHLDPEIYPDPLTFK 391
Query: 451 PDRFLSENVAGRN---------PYAYIPFSAGPRNCIG 479
DR+L EN + Y Y+PF +G C G
Sbjct: 392 YDRYLDENGKTKTTFYCNGLKLKYYYMPFGSGATICPG 429
>pdb|3SN5|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With
Cholest-4-En-3-One
pdb|3SN5|B Chain B, Crystal Structure Of Human Cyp7a1 In Complex With
Cholest-4-En-3-One
pdb|3V8D|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With
7-Ketocholesterol
pdb|3V8D|B Chain B, Crystal Structure Of Human Cyp7a1 In Complex With
7-Ketocholesterol
Length = 491
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 65/158 (41%), Gaps = 22/158 (13%)
Query: 343 TSAAICWTLLLLGSNQEIQNKVYEEILVTSFKALHK--------PFTTRSLNSMKYLEAC 394
T A W+L + N E EE+ T A K + LN + L++
Sbjct: 273 TIPATFWSLFQMIRNPEAMKAATEEVKRTLENAGQKVSLEGNPICLSQAELNDLPVLDSI 332
Query: 395 IKEALRLYPSVPFIARKLSEDVPL----PDYVLPRDTEVIIVVYNLHRDPEVFPRPELYD 450
IKE+LRL S R ED L Y + +D + + +H DPE++P P +
Sbjct: 333 IKESLRL-SSASLNIRTAKEDFTLHLEDGSYNIRKDDIIALYPQLMHLDPEIYPDPLTFK 391
Query: 451 PDRFLSENVAGRN---------PYAYIPFSAGPRNCIG 479
DR+L EN + Y Y+PF +G C G
Sbjct: 392 YDRYLDENGKTKTTFYCNGLKLKYYYMPFGSGATICPG 429
>pdb|3NC3|A Chain A, Cyp134a1 Structure With A Closed Substrate Binding Loop
pdb|3NC3|B Chain B, Cyp134a1 Structure With A Closed Substrate Binding Loop
pdb|3NC5|A Chain A, Cyp134a1 Structure With An Open Substrate Binding Loop
pdb|3NC5|B Chain B, Cyp134a1 Structure With An Open Substrate Binding Loop
pdb|3NC6|A Chain A, Cyp134a1 1-Phenylimidazole Bound Structure
pdb|3NC6|B Chain B, Cyp134a1 1-Phenylimidazole Bound Structure
pdb|3NC7|A Chain A, Cyp134a1 2-Phenylimidazole Bound Structure
pdb|3NC7|B Chain B, Cyp134a1 2-Phenylimidazole Bound Structure
Length = 441
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 51/92 (55%), Gaps = 7/92 (7%)
Query: 394 CIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYDPDR 453
I E LR P V I R+LS+D + + +DT V ++ +RDPE F +P++++ R
Sbjct: 305 AIAETLRYKPPVQLIPRQLSQDTVVGGMEIKKDTIVFCMIGAANRDPEAFEQPDVFNIHR 364
Query: 454 FLSENVAGRNPYA----YIPFSAGPRNCIGES 481
E++ ++ ++ ++ F +G NC+G +
Sbjct: 365 ---EDLGIKSAFSGAARHLAFGSGIHNCVGTA 393
>pdb|2IAG|A Chain A, Crystal Structure Of Human Prostacyclin Synthase
pdb|2IAG|B Chain B, Crystal Structure Of Human Prostacyclin Synthase
Length = 482
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 63/114 (55%), Gaps = 16/114 (14%)
Query: 383 RSLNSMKYLEACIKEALRLYPSVPFIARKLSEDVPLP-----DYVLPRDTEVIIVVY-NL 436
+ L+S L++ + E+LRL + PFI R++ D+ +P ++ L R +++ + +
Sbjct: 311 KVLDSTPVLDSVLSESLRL-TAAPFITREVVVDLAMPMADGREFNLRRGDRLLLFPFLSP 369
Query: 437 HRDPEVFPRPELYDPDRFLSENVA--------GRNPYAY-IPFSAGPRNCIGES 481
RDPE++ PE++ +RFL+ + + G+ Y +P+ AG +C+G S
Sbjct: 370 QRDPEIYTDPEVFKYNRFLNPDGSEKKDFYKDGKRLKNYNMPWGAGHNHCLGRS 423
>pdb|3B6H|A Chain A, Crystal Structure Of Human Prostacyclin Synthase In
Complex With Inhibitor Minoxidil
pdb|3B6H|B Chain B, Crystal Structure Of Human Prostacyclin Synthase In
Complex With Inhibitor Minoxidil
Length = 498
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 63/114 (55%), Gaps = 16/114 (14%)
Query: 383 RSLNSMKYLEACIKEALRLYPSVPFIARKLSEDVPLP-----DYVLPRDTEVIIVVY-NL 436
+ L+S L++ + E+LRL + PFI R++ D+ +P ++ L R +++ + +
Sbjct: 323 KVLDSTPVLDSVLSESLRL-TAAPFITREVVVDLAMPMADGREFNLRRGDRLLLFPFLSP 381
Query: 437 HRDPEVFPRPELYDPDRFLSENVA--------GRNPYAY-IPFSAGPRNCIGES 481
RDPE++ PE++ +RFL+ + + G+ Y +P+ AG +C+G S
Sbjct: 382 QRDPEIYTDPEVFKYNRFLNPDGSEKKDFYKDGKRLKNYNMPWGAGHNHCLGRS 435
>pdb|3BUJ|A Chain A, Crystal Structure Of Calo2
Length = 397
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 77/170 (45%), Gaps = 29/170 (17%)
Query: 310 FLDLLIEASERHNLSDENIREEVDTFMFEGHDTTSAAICWTLLLLGSNQEIQNKVYEEIL 369
L L+++A +R +S I V TF+F GH+T ++ + +L L ++ + + +
Sbjct: 205 LLALMLDAHDRGLMSRNEIVSTVVTFIFTGHETVASQVGNAVLSLLAHPDQLDLLRR--- 261
Query: 370 VTSFKALHKPFTTRSLNSMKYLEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEV 429
+P L ++E LR PSV R+L DV L L RD V
Sbjct: 262 --------RP---------DLLAQAVEECLRYDPSVQSNTRQLDVDVELRGRRLRRDDVV 304
Query: 430 IIVVYNLHRDPEVFPRPELYDPDRFLSENVAGRNPYAYIPFSAGPRNCIG 479
+++ +RDP + RP+ +D + R+P + F AG R C+G
Sbjct: 305 VVLAGAANRDPRRYDRPDDFDIE---------RDPVPSMSFGAGMRYCLG 345
>pdb|3R9C|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 With
Econazole Bound
pdb|3R9B|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
pdb|3R9B|B Chain B, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
pdb|3R9B|C Chain C, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
Length = 418
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 43/87 (49%), Gaps = 9/87 (10%)
Query: 393 ACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYDPD 452
A I+E +R P V ++R +D+ + + +P+ +++++ HRDP + P+ +DPD
Sbjct: 291 AVIEETMRYDPPVQLVSRYAGDDLTIGTHTVPKGDTMLLLLAAAHRDPTIVGAPDRFDPD 350
Query: 453 RFLSENVAGRNPYAYIPFSAGPRNCIG 479
R ++ F G C+G
Sbjct: 351 RAQIRHLG---------FGKGAHFCLG 368
>pdb|2Z3T|A Chain A, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3T|B Chain B, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3T|C Chain C, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3T|D Chain D, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3U|A Chain A, Crystal Structure Of Chromopyrrolic Acid Bound Cytochrome
P450 Stap (Cyp245a1)
pdb|3A1L|A Chain A, Crystal Structure Of 11,11'-Dichlorochromopyrrolic Acid
Bound Cytochrome P450 Stap (Cyp245a1)
Length = 425
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 66/147 (44%), Gaps = 29/147 (19%)
Query: 335 FMFEGHDTTSAAICWTLLLLGSNQEIQNKVYEEILVTSFKALHKPFTTRSLNSMKYLEAC 394
+ GH+TT+ + +L L ++++ V +E+ T P +T A
Sbjct: 251 LLTAGHETTTNFLAKAVLTLRAHRD----VLDELRTT-------PEST---------PAA 290
Query: 395 IKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYDPDRF 454
++E +R P V + R ED+ L D+ +PR + V+ ++ + +RDP FP P++ D R
Sbjct: 291 VEELMRYDPPVQAVTRWAYEDIRLGDHDIPRGSRVVALLGSANRDPARFPDPDVLDVHRA 350
Query: 455 LSENVAGRNPYAYIPFSAGPRNCIGES 481
V F G C+G +
Sbjct: 351 AERQVG---------FGLGIHYCLGAT 368
>pdb|1IO8|A Chain A, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO8|B Chain B, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
Length = 368
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 59/129 (45%), Gaps = 14/129 (10%)
Query: 351 LLLLGSNQEIQNKVYEEILVTSFKALHKPFTTRSLNSMKYLEACIKEALRLYPSVPFIAR 410
LLL+ N+ N + ++ + L + +L YL+A I+EALR P V R
Sbjct: 205 LLLIAGNETTTNLISNSVIDFTRFNLWQRIREENL----YLKA-IEEALRYSPPVMRTVR 259
Query: 411 KLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYDPDRFLSENVAGRNPYAYIPF 470
K E V L D + V + + + +RD EVF E + PD RNP ++ F
Sbjct: 260 KTKERVKLGDQTIEEGEYVRVWIASANRDEEVFHDGEKFIPD---------RNPNPHLSF 310
Query: 471 SAGPRNCIG 479
+G C+G
Sbjct: 311 GSGIHLCLG 319
>pdb|1F4T|A Chain A, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
With 4- Phenylimidazole Bound
pdb|1F4T|B Chain B, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
With 4- Phenylimidazole Bound
pdb|1F4U|A Chain A, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
pdb|1F4U|B Chain B, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
pdb|1IO9|A Chain A, Thermophilic Cytochrome P450 (cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO9|B Chain B, Thermophilic Cytochrome P450 (cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO7|A Chain A, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO7|B Chain B, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
Length = 368
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 59/129 (45%), Gaps = 14/129 (10%)
Query: 351 LLLLGSNQEIQNKVYEEILVTSFKALHKPFTTRSLNSMKYLEACIKEALRLYPSVPFIAR 410
LLL+ N+ N + ++ + L + +L YL+A I+EALR P V R
Sbjct: 205 LLLIAGNETTTNLISNSVIDFTRFNLWQRIREENL----YLKA-IEEALRYSPPVMRTVR 259
Query: 411 KLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYDPDRFLSENVAGRNPYAYIPF 470
K E V L D + V + + + +RD EVF E + PD RNP ++ F
Sbjct: 260 KTKERVKLGDQTIEEGEYVRVWIASANRDEEVFHDGEKFIPD---------RNPNPHLSF 310
Query: 471 SAGPRNCIG 479
+G C+G
Sbjct: 311 GSGIHLCLG 319
>pdb|3P3L|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Wildtype) From Streptomyces Thioluteus
pdb|3P3L|B Chain B, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Wildtype) From Streptomyces Thioluteus
Length = 406
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 67/169 (39%), Gaps = 29/169 (17%)
Query: 314 LIEASERHNLSDENIREEVDTFMFEGHDTTSAAICWTLLLLGSNQEIQNKVYEEILVTSF 373
++ A L D +R V T + G++TT+ + + + + K+ E
Sbjct: 219 IVRAFHDGVLDDYELRTLVATVLVAGYETTNHQLALAMYDFAQHPDQWMKIKE------- 271
Query: 374 KALHKPFTTRSLNSMKYLEACIKEALRLYPSVPFIA-RKLSEDVPLPDYVLPRDTEVIIV 432
+ + ++E LR P++P A R +ED + +P T V +
Sbjct: 272 -------------NPELAPQAVEEVLRWSPTLPVTATRVAAEDFEVNGVRIPTGTPVFMC 318
Query: 433 VYNLHRDPEVFPRPELYDPDRFLSENVAGRNPYAYIPFSAGPRNCIGES 481
+ HRDP VF D DRF ++ + I F GP C+G +
Sbjct: 319 AHVAHRDPRVF-----ADADRF---DITVKREAPSIAFGGGPHFCLGTA 359
>pdb|3EJB|B Chain B, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|D Chain D, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|F Chain F, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|H Chain H, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|B Chain B, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|D Chain D, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|F Chain F, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|H Chain H, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|B Chain B, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|D Chain D, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|F Chain F, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|H Chain H, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
Length = 404
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/183 (21%), Positives = 75/183 (40%), Gaps = 31/183 (16%)
Query: 310 FLDLLIEASERHNLSDENIREEVDTFMFEGHDTTSAAICWTLLLLGSNQEIQNKVYEEIL 369
+ +L++ E+ L++E GH+TT I ++L L + E K+ E
Sbjct: 206 MISMLLKGREKDKLTEEEAASTCILLAIAGHETTVNLISNSVLCLLQHPEQLLKLRE--- 262
Query: 370 VTSFKALHKPFTTRSLNSMKYLEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEV 429
+ + ++E LR AR SED+ + + + +V
Sbjct: 263 -----------------NPDLIGTAVEECLRYESPTQMTARVASEDIDICGVTIRQGEQV 305
Query: 430 IIVVYNLHRDPEVFPRPELYDPDRFLSENVAGRNPYAYIPFSAGPRNCIGESEILEREQR 489
+++ +RDP +F P+++D R+P ++ F G C+G S L R +
Sbjct: 306 YLLLGAANRDPSIFTNPDVFD---------ITRSPNPHLSFGHGHHVCLGSS--LARLEA 354
Query: 490 KVA 492
++A
Sbjct: 355 QIA 357
>pdb|3P3O|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Ntermii) From Streptomyces Thioluteus
pdb|3P3X|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Nterm- Aurh-I) From Streptomyces Thioluteus
pdb|3P3X|B Chain B, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Nterm- Aurh-I) From Streptomyces Thioluteus
pdb|3P3Z|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh From Streptomyces Thioluteus In Complex With
Ancymidol
Length = 416
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 42/89 (47%), Gaps = 9/89 (10%)
Query: 394 CIKEALRLYPSVPFIA-RKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYDPD 452
++E LR P++P A R +ED + +P T V + + HRDP VF D D
Sbjct: 289 AVEEVLRWSPTLPVTATRVAAEDFEVNGVRIPTGTPVFMCAHVAHRDPRVF-----ADAD 343
Query: 453 RFLSENVAGRNPYAYIPFSAGPRNCIGES 481
RF ++ + I F GP C+G +
Sbjct: 344 RF---DITVKREAPSIAFGGGPHFCLGTA 369
>pdb|3VNO|A Chain A, Cytochrome P450sp Alpha (cyp152b1) Mutant R241e
Length = 407
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 44/99 (44%), Gaps = 7/99 (7%)
Query: 390 YLEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELY 449
Y E ++E R YP P + + S+D P +V++ +Y + D + P+ +
Sbjct: 265 YAELFVQEVRRFYPFFPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQEF 324
Query: 450 DPDRFLSENVAGRNPYAYIPFSAG----PRNCIGESEIL 484
P+RF + + + + +IP G C GE +L
Sbjct: 325 RPERFRAWD---EDSFNFIPQGGGDHYLGHRCPGEWIVL 360
>pdb|3VOO|A Chain A, Cytochrome P450sp Alpha (cyp152b1) Mutant A245e
Length = 407
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 44/99 (44%), Gaps = 7/99 (7%)
Query: 390 YLEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELY 449
Y E ++E R YP P + + S+D P +V++ +Y + D + P+ +
Sbjct: 265 YAELFVQEVRRFYPFFPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQEF 324
Query: 450 DPDRFLSENVAGRNPYAYIPFSAG----PRNCIGESEIL 484
P+RF + + + + +IP G C GE +L
Sbjct: 325 RPERFRAWD---EDSFNFIPQGGGDHYLGHRCPGEWIVL 360
>pdb|3VM4|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) In Complex With
(R)-Ibuprophen
Length = 407
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 44/99 (44%), Gaps = 7/99 (7%)
Query: 390 YLEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELY 449
Y E ++E R YP P + + S+D P +V++ +Y + D + P+ +
Sbjct: 265 YAELFVQEVRRFYPFFPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQEF 324
Query: 450 DPDRFLSENVAGRNPYAYIPFSAG----PRNCIGESEIL 484
P+RF + + + + +IP G C GE +L
Sbjct: 325 RPERFRAWD---EDSFNFIPQGGGDHYLGHRCPGEWIVL 360
>pdb|3AWM|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Wild-Type With Palmitic
Acid
Length = 415
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 44/99 (44%), Gaps = 7/99 (7%)
Query: 390 YLEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELY 449
Y E ++E R YP P + + S+D P +V++ +Y + D + P+ +
Sbjct: 273 YAELFVQEVRRFYPFFPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQEF 332
Query: 450 DPDRFLSENVAGRNPYAYIPFSAG----PRNCIGESEIL 484
P+RF + + + + +IP G C GE +L
Sbjct: 333 RPERFRAWD---EDSFNFIPQGGGDHYLGHRCPGEWIVL 368
>pdb|3AWQ|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Mutant L78f
Length = 415
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 44/99 (44%), Gaps = 7/99 (7%)
Query: 390 YLEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELY 449
Y E ++E R YP P + + S+D P +V++ +Y + D + P+ +
Sbjct: 273 YAELFVQEVRRFYPFFPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQEF 332
Query: 450 DPDRFLSENVAGRNPYAYIPFSAG----PRNCIGESEIL 484
P+RF + + + + +IP G C GE +L
Sbjct: 333 RPERFRAWD---EDSFNFIPQGGGDHYLGHRCPGEWIVL 368
>pdb|1GWI|A Chain A, The 1.92 A Structure Of Streptomyces Coelicolor A3(2)
Cyp154c1: A New Monooxygenase That Functionalizes
Macrolide Ring Systems
pdb|1GWI|B Chain B, The 1.92 A Structure Of Streptomyces Coelicolor A3(2)
Cyp154c1: A New Monooxygenase That Functionalizes
Macrolide Ring Systems
Length = 411
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 82/200 (41%), Gaps = 33/200 (16%)
Query: 297 MEDSAEDVKKRPA--FLDLLIEASERHN-LSDENIREEVDTFMFEGHDTTSAAICWTLLL 353
M D+ + P LI+ASE + L+D I + + GH+TT + I ++
Sbjct: 198 MTDTVAAKRAAPGDDLTSALIQASENGDHLTDAEIVSTLQLMVAAGHETTISLIVNAVVN 257
Query: 354 LGSNQEIQNKVYEEILVTSFKALHKPFTTRSLNSMKYLEACIKEALRL-YPSVPFIARKL 412
L ++ E + LV S +A A ++E LR P+ + R
Sbjct: 258 LSTHPE------QRALVLSGEA--------------EWSAVVEETLRFSTPTSHVLIRFA 297
Query: 413 SEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYDPDRFLSENVAGRNPYAYIPFSA 472
+EDVP+ D V+P +I+ L RD R DRF +G +I F
Sbjct: 298 AEDVPVGDRVIPAGDALIVSYGALGRD----ERAHGPTADRFDLTRTSGNR---HISFGH 350
Query: 473 GPRNCIGESEILEREQRKVA 492
GP C G + L R + VA
Sbjct: 351 GPHVCPGAA--LSRMEAGVA 368
>pdb|1IZO|A Chain A, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|1IZO|B Chain B, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|1IZO|C Chain C, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|2ZQX|A Chain A, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQX|B Chain B, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQX|C Chain C, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQJ|A Chain A, Substrate-Free Form Of Cytochrome P450bsbeta
pdb|2ZQJ|B Chain B, Substrate-Free Form Of Cytochrome P450bsbeta
pdb|2ZQJ|C Chain C, Substrate-Free Form Of Cytochrome P450bsbeta
Length = 417
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 48/107 (44%), Gaps = 8/107 (7%)
Query: 383 RSLNSMKYLEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEV 442
RS NS + E ++E R YP PF+ + +D + + T V++ +Y + DP +
Sbjct: 269 RSGNS-REREMFVQEVRRYYPFGPFLGALVKKDFVWNNCEFKKGTSVLLDLYGTNHDPRL 327
Query: 443 FPRPELYDPDRFLSENVAGRNPYAYIPFSAG----PRNCIGESEILE 485
+ P+ + P+RF N + IP G C GE +E
Sbjct: 328 WDHPDEFRPERFAERE---ENLFDMIPQGGGHAEKGHRCPGEGITIE 371
>pdb|3AWP|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Mutant F288g
Length = 415
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 44/99 (44%), Gaps = 7/99 (7%)
Query: 390 YLEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELY 449
Y E ++E R YP P + + S+D P +V++ +Y + D + P+ +
Sbjct: 273 YAELFVQEVRRFYPFGPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQEF 332
Query: 450 DPDRFLSENVAGRNPYAYIPFSAG----PRNCIGESEIL 484
P+RF + + + + +IP G C GE +L
Sbjct: 333 RPERFRAWD---EDSFNFIPQGGGDHYLGHRCPGEWIVL 368
>pdb|1UE8|A Chain A, Crystal Structure Of Thermophilic Cytochrome P450 From
Sulfolobus Tokodaii
pdb|3B4X|A Chain A, Crystal Structure Analysis Of Sulfolobus Tokodaii Strain7
Cytochrom P450
Length = 367
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 64/154 (41%), Gaps = 17/154 (11%)
Query: 349 WTLLLLGSNQEIQNKVYEEILVTSFKALHKPFTTRSLNSMKYLEACIKEALRLYPSVPFI 408
+ LL++ N+ N + I F + R ++K ++EALR P V
Sbjct: 204 FILLMIAGNETTTNLIGNAI--EDFTLYNSWDYVREKGALK----AVEEALRFSPPVMRT 257
Query: 409 ARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYDPDRFLSENVAGRNPYAYI 468
R E V + D V+ V + + + +RD EVF P+ + PD R P ++
Sbjct: 258 IRVTKEKVKIRDQVIDEGELVRVWIASANRDEEVFKDPDSFIPD---------RTPNPHL 308
Query: 469 PFSAGPRNCIGESEILEREQRKVATYSANNTFNV 502
F +G C+G L R + ++A F V
Sbjct: 309 SFGSGIHLCLGAP--LARLEARIALEEFAKKFRV 340
>pdb|3MGX|A Chain A, Crystal Structure Of P450 Oxyd That Is Involved In The
Biosynthesis Of Vancomycin-Type Antibiotics
pdb|3MGX|B Chain B, Crystal Structure Of P450 Oxyd That Is Involved In The
Biosynthesis Of Vancomycin-Type Antibiotics
Length = 415
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 56/135 (41%), Gaps = 22/135 (16%)
Query: 352 LLLGSNQEIQNKVYEEILVTSFKALHKPFTTRSL-----NSMKYLEACIKEALRLYPSVP 406
+L+G N+ ++ + A+H T L + ++ ++E LR
Sbjct: 251 VLIGGNETTRHAIT--------GAVHALATVPGLLTALRDGSADVDTVVEEVLRWTSPAM 302
Query: 407 FIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYDPDRFLSENVAGRNPYA 466
+ R + DV + LP T V+ + +RDP F DPD FL GR P
Sbjct: 303 HVLRVTTADVTINGRDLPSGTPVVAWLPAANRDPAEFD-----DPDTFLP----GRKPNR 353
Query: 467 YIPFSAGPRNCIGES 481
+I F G +C+G +
Sbjct: 354 HITFGHGMHHCLGSA 368
>pdb|3RWL|A Chain A, Structure Of P450pyr Hydroxylase
Length = 426
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 56/131 (42%), Gaps = 15/131 (11%)
Query: 351 LLLLGSNQEIQNKVYEEILVTSFKALHK-PFTTRSLNSMKYL-EACIKEALRLYPSVPFI 408
LL++G N +N + +L ALHK P L + L E + E +R + +
Sbjct: 261 LLIVGGNDTTRNSMTGGVL-----ALHKNPDQFAKLKANPALVETMVPEIIRWQTPLAHM 315
Query: 409 ARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYDPDRFLSENVAGRNPYAYI 468
R D L + + +V++ Y+ +RD EV RPE + DR P ++
Sbjct: 316 RRTAIADSELGGKTIRKGDKVVMWYYSGNRDDEVIDRPEEFIIDR--------PRPRQHL 367
Query: 469 PFSAGPRNCIG 479
F G C+G
Sbjct: 368 SFGFGIHRCVG 378
>pdb|4EP6|A Chain A, Crystal Structure Of The Xpla Heme Domain In Complex With
Imidazole And Peg
Length = 392
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 76/194 (39%), Gaps = 31/194 (15%)
Query: 287 LKARRNIEETMEDSAEDVKKRPAFLDLLIEASERHNLSDENIREEVDTFMFEGHDTTSAA 346
L AR + E +ED + V D L++A+ +++ + F GH
Sbjct: 184 LSAR--VAEMLED--KRVNPGDGLADSLLDAARAGEITESEAIATILVFYAVGHMAIGYL 239
Query: 347 ICWTLLLLGSNQEIQNKVYEEILVTSFKALHKPFTTRSLNSMKYLEACIKEALRLYPSVP 406
I + L E+ T+F+ N A I E +R+ P
Sbjct: 240 IASGIELFARRPEV---------FTAFR-----------NDESARAAIINEMVRMDPPQL 279
Query: 407 FIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYDPDRFLSENVAGRNPYA 466
R +EDV + ++ + + ++ +RDPEVF P+++D R A RN
Sbjct: 280 SFLRFPTEDVEIGGVLIEAGSPIRFMIGAANRDPEVFDDPDVFDHTR---PPAASRN--- 333
Query: 467 YIPFSAGPRNCIGE 480
+ F GP +C G+
Sbjct: 334 -LSFGLGPHSCAGQ 346
>pdb|2WIV|A Chain A, Cytochrome-P450 Xpla Heme Domain P21
pdb|2WIV|B Chain B, Cytochrome-P450 Xpla Heme Domain P21
pdb|2WIY|A Chain A, Cytochrome P450 Xpla Heme Domain P21212
Length = 394
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 76/194 (39%), Gaps = 31/194 (15%)
Query: 287 LKARRNIEETMEDSAEDVKKRPAFLDLLIEASERHNLSDENIREEVDTFMFEGHDTTSAA 346
L AR + E +ED + V D L++A+ +++ + F GH
Sbjct: 186 LSAR--VAEMLED--KRVNPGDGLADSLLDAARAGEITESEAIATILVFYAVGHMAIGYL 241
Query: 347 ICWTLLLLGSNQEIQNKVYEEILVTSFKALHKPFTTRSLNSMKYLEACIKEALRLYPSVP 406
I + L E+ T+F+ N A I E +R+ P
Sbjct: 242 IASGIELFARRPEV---------FTAFR-----------NDESARAAIINEMVRMDPPQL 281
Query: 407 FIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYDPDRFLSENVAGRNPYA 466
R +EDV + ++ + + ++ +RDPEVF P+++D R A RN
Sbjct: 282 SFLRFPTEDVEIGGVLIEAGSPIRFMIGAANRDPEVFDDPDVFDHTR---PPAASRN--- 335
Query: 467 YIPFSAGPRNCIGE 480
+ F GP +C G+
Sbjct: 336 -LSFGLGPHSCAGQ 348
>pdb|2WGY|A Chain A, Crystal Structure Of The G243a Mutant Of Cyp130 From M.
Tuberculosis
Length = 413
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 84/210 (40%), Gaps = 23/210 (10%)
Query: 289 ARRNIEETMEDSAEDVKKRPAFLDLLIEASERHNLSDENIREEVDTFMFEGHDTTSA--- 345
A ++ + + V A+ LIE R +D+ I V + DT
Sbjct: 181 AANAVDGATTGALDAVGSMMAYFTGLIE-RRRTEPADDAISHLVAAGVGADGDTAGTLSI 239
Query: 346 -AICWTLLLLGSNQEIQNKVYEEILVTSFKALHKPFTTRSL--NSMKYLEACIKEALRLY 402
A +T++ G N +L S LH+ R L + + + ++E LRL
Sbjct: 240 LAFTFTMVTAG------NDTVTGMLGGSMPLLHRRPDQRRLLLDDPEGIPDAVEELLRLT 293
Query: 403 PSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYDPDRFLSENVAGR 462
V +AR + DV + D +P V+++ + +RD Y PD +E R
Sbjct: 294 SPVQGLARTTTRDVTIGDTTIPAGRRVLLLYGSANRD------ERQYGPD--AAELDVTR 345
Query: 463 NPYAYIPFSAGPRNCIGESEILEREQRKVA 492
P + FS G +C+G + R Q +VA
Sbjct: 346 CPRNILTFSHGAHHCLGAAA--ARMQCRVA 373
>pdb|2WHW|A Chain A, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WHW|B Chain B, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WI9|A Chain A, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WI9|B Chain B, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
Length = 436
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 48/106 (45%), Gaps = 12/106 (11%)
Query: 388 MKYLEACIKEALRLYPSVPFIARKLS-EDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRP 446
M L+ ++E LR V + E V L V+P V++V+ + HR PE FP P
Sbjct: 293 MTLLDGAVEEMLRYEGPVESATYRFPVEPVDLDGTVIPAGDTVLVVLADAHRTPERFPDP 352
Query: 447 ELYDPDRFLSENVAGRNPYAYIPFSAGPRNCIGESEILEREQRKVA 492
+D + + AG ++ F G CIG L R + ++A
Sbjct: 353 HRFD----IRRDTAG-----HLAFGHGIHFCIGAP--LARLEARIA 387
>pdb|2VZ7|A Chain A, Crystal Structure Of The Yc-17-Bound Pikc D50n Mutant
pdb|2VZ7|B Chain B, Crystal Structure Of The Yc-17-Bound Pikc D50n Mutant
pdb|2VZM|A Chain A, Crystal Structure Of The Narbomycin-Bound Pikc D50n Mutant
pdb|2VZM|B Chain B, Crystal Structure Of The Narbomycin-Bound Pikc D50n Mutant
Length = 436
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 48/106 (45%), Gaps = 12/106 (11%)
Query: 388 MKYLEACIKEALRLYPSVPFIARKLS-EDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRP 446
M L+ ++E LR V + E V L V+P V++V+ + HR PE FP P
Sbjct: 293 MTLLDGAVEEMLRYEGPVESATYRFPVEPVDLDGTVIPAGDTVLVVLADAHRTPERFPDP 352
Query: 447 ELYDPDRFLSENVAGRNPYAYIPFSAGPRNCIGESEILEREQRKVA 492
+D + + AG ++ F G CIG L R + ++A
Sbjct: 353 HRFD----IRRDTAG-----HLAFGHGIHFCIGAP--LARLEARIA 387
>pdb|2BVJ|A Chain A, Ligand-Free Structure Of Cytochrome P450 Pikc (Cyp107l1)
pdb|2BVJ|B Chain B, Ligand-Free Structure Of Cytochrome P450 Pikc (Cyp107l1)
pdb|2C6H|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2C6H|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2C7X|A Chain A, Crystal Structure Of Narbomycin-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CA0|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CA0|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CD8|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CD8|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
Length = 436
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 48/106 (45%), Gaps = 12/106 (11%)
Query: 388 MKYLEACIKEALRLYPSVPFIARKLS-EDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRP 446
M L+ ++E LR V + E V L V+P V++V+ + HR PE FP P
Sbjct: 293 MTLLDGAVEEMLRYEGPVESATYRFPVEPVDLDGTVIPAGDTVLVVLADAHRTPERFPDP 352
Query: 447 ELYDPDRFLSENVAGRNPYAYIPFSAGPRNCIGESEILEREQRKVA 492
+D + + AG ++ F G CIG L R + ++A
Sbjct: 353 HRFD----IRRDTAG-----HLAFGHGIHFCIGAP--LARLEARIA 387
>pdb|2UUQ|A Chain A, Crystal Structure Of Cyp130 From Mycobacterium
Tuberculosis In The Ligand-Free Form
pdb|2UVN|A Chain A, Crystal Structure Of Econazole-Bound Cyp130 From
Mycobacterium Tuberculosis
pdb|2UVN|B Chain B, Crystal Structure Of Econazole-Bound Cyp130 From
Mycobacterium Tuberculosis
Length = 414
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 84/210 (40%), Gaps = 23/210 (10%)
Query: 289 ARRNIEETMEDSAEDVKKRPAFLDLLIEASERHNLSDENIREEVDTFMFEGHDTTSA--- 345
A ++ + + V A+ LIE R +D+ I V + DT
Sbjct: 182 AANAVDGATTGALDAVGSMMAYFTGLIE-RRRTEPADDAISHLVAAGVGADGDTAGTLSI 240
Query: 346 -AICWTLLLLGSNQEIQNKVYEEILVTSFKALHKPFTTRSL--NSMKYLEACIKEALRLY 402
A +T++ G N +L S LH+ R L + + + ++E LRL
Sbjct: 241 LAFTFTMVTGG------NDTVTGMLGGSMPLLHRRPDQRRLLLDDPEGIPDAVEELLRLT 294
Query: 403 PSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYDPDRFLSENVAGR 462
V +AR + DV + D +P V+++ + +RD Y PD +E R
Sbjct: 295 SPVQGLARTTTRDVTIGDTTIPAGRRVLLLYGSANRD------ERQYGPD--AAELDVTR 346
Query: 463 NPYAYIPFSAGPRNCIGESEILEREQRKVA 492
P + FS G +C+G + R Q +VA
Sbjct: 347 CPRNILTFSHGAHHCLGAAA--ARMQCRVA 374
>pdb|2WH8|A Chain A, Interaction Of Mycobacterium Tuberculosis Cyp130 With
Heterocyclic Arylamines
pdb|2WH8|B Chain B, Interaction Of Mycobacterium Tuberculosis Cyp130 With
Heterocyclic Arylamines
pdb|2WH8|C Chain C, Interaction Of Mycobacterium Tuberculosis Cyp130 With
Heterocyclic Arylamines
pdb|2WH8|D Chain D, Interaction Of Mycobacterium Tuberculosis Cyp130 With
Heterocyclic Arylamines
pdb|2WHF|A Chain A, Interaction Of Mycobacterium Tuberculosis Cyp130 With
Heterocyclic Arylamines
Length = 413
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 84/210 (40%), Gaps = 23/210 (10%)
Query: 289 ARRNIEETMEDSAEDVKKRPAFLDLLIEASERHNLSDENIREEVDTFMFEGHDTTSA--- 345
A ++ + + V A+ LIE R +D+ I V + DT
Sbjct: 181 AANAVDGATTGALDAVGSMMAYFTGLIE-RRRTEPADDAISHLVAAGVGADGDTAGTLSI 239
Query: 346 -AICWTLLLLGSNQEIQNKVYEEILVTSFKALHKPFTTRSL--NSMKYLEACIKEALRLY 402
A +T++ G N +L S LH+ R L + + + ++E LRL
Sbjct: 240 LAFTFTMVTGG------NDTVTGMLGGSMPLLHRRPDQRRLLLDDPEGIPDAVEELLRLT 293
Query: 403 PSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYDPDRFLSENVAGR 462
V +AR + DV + D +P V+++ + +RD Y PD +E R
Sbjct: 294 SPVQGLARTTTRDVTIGDTTIPAGRRVLLLYGSANRD------ERQYGPD--AAELDVTR 345
Query: 463 NPYAYIPFSAGPRNCIGESEILEREQRKVA 492
P + FS G +C+G + R Q +VA
Sbjct: 346 CPRNILTFSHGAHHCLGAAA--ARMQCRVA 373
>pdb|3DAM|A Chain A, Crystal Structure Of Allene Oxide Synthase
pdb|3DAN|A Chain A, Crystal Structure Of Allene Oxide Synthase
pdb|3DBM|A Chain A, Crystal Structure Of Allene Oxide Synthase
Length = 473
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 53/112 (47%), Gaps = 10/112 (8%)
Query: 381 TTRSLNSMKYLEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLH--- 437
T ++ M ++ + E+LR+ P VP K + + + + + +++
Sbjct: 320 TLEAIEQMPLTKSVVYESLRIEPPVPPQYGKAKSNFTIESHDATFEVKKGEMLFGYQPFA 379
Query: 438 -RDPEVFPRPELYDPDRFLSENVAGRNPYAYIPFSAGPRNCIGESEILEREQ 488
+DP+VF RPE Y PDRF+ + G Y+ +S GP ES +E +Q
Sbjct: 380 TKDPKVFDRPEEYVPDRFVGD---GEALLKYVWWSNGPET---ESPTVENKQ 425
>pdb|3TYW|A Chain A, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|3TYW|B Chain B, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|3TYW|C Chain C, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|3TYW|D Chain D, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|4FXB|A Chain A, Crystal Structure Of Cyp105n1 From Streptomyces
Coelicolor: A Cytochrome P450 Oxidase In The Coelibactin
Siderophore Biosynthetic Pathway
pdb|4FXB|B Chain B, Crystal Structure Of Cyp105n1 From Streptomyces
Coelicolor: A Cytochrome P450 Oxidase In The Coelibactin
Siderophore Biosynthetic Pathway
Length = 417
Score = 37.4 bits (85), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 66/162 (40%), Gaps = 34/162 (20%)
Query: 322 NLSDENIREEVDTFMFEGHDTTSAAICWTLLLLGSNQEIQNKVYEEILVTSFKALHKPFT 381
N++ E + + + G +TT++ I + LLL E+ ++ ++
Sbjct: 233 NVTTEQLLSTLGITINAGRETTTSMIALSTLLLLDRPELPAELRKD-------------- 278
Query: 382 TRSLNSMKYLEACIKEALRLYP---SVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHR 438
+ A + E LR+ S+P R +ED+ L +P D VI ++ +
Sbjct: 279 ------PDLMPAAVDELLRVLSVADSIPL--RVAAEDIELSGRTVPADDGVIALLAGANH 330
Query: 439 DPEVFPRPELYDPDRFLSENVAGRNPYAYIPFSAGPRNCIGE 480
DPE F PE D R + +VA F G C+G+
Sbjct: 331 DPEQFDDPERVDFHRTDNHHVA---------FGYGVHQCVGQ 363
>pdb|2D0E|A Chain A, Substrate Assited In Oxygen Activation In Cytochrome P450
158a2
Length = 407
Score = 36.6 bits (83), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 44/99 (44%), Gaps = 17/99 (17%)
Query: 394 CIKEALRLYP--SVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYDP 451
I E LR P + ++R EDV + + V + +RDPEVFP DP
Sbjct: 277 AIDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFP-----DP 331
Query: 452 DRFLSENVAGRNPYAYIPFSAGPRNCIG------ESEIL 484
DR E R+P ++ F GP C G ESE+L
Sbjct: 332 DRIDFE----RSPNPHVSFGFGPHYCPGGMLARLESELL 366
>pdb|2D09|A Chain A, A Role For Active Site Water Molecules And Hydroxyl Groups
Of Substrate For Oxygen Activation In Cytochrome P450
158a2
Length = 407
Score = 36.6 bits (83), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 44/99 (44%), Gaps = 17/99 (17%)
Query: 394 CIKEALRLYP--SVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYDP 451
I E LR P + ++R EDV + + V + +RDPEVFP DP
Sbjct: 277 AIDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFP-----DP 331
Query: 452 DRFLSENVAGRNPYAYIPFSAGPRNCIG------ESEIL 484
DR E R+P ++ F GP C G ESE+L
Sbjct: 332 DRIDFE----RSPNPHVSFGFGPHYCPGGMLARLESELL 366
>pdb|1SE6|A Chain A, Crystal Structure Of Streptomyces Coelicolor A3(2)
Cyp158a2 From Antibiotic Biosynthetic Pathways
pdb|1SE6|B Chain B, Crystal Structure Of Streptomyces Coelicolor A3(2)
Cyp158a2 From Antibiotic Biosynthetic Pathways
Length = 406
Score = 36.6 bits (83), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 44/99 (44%), Gaps = 17/99 (17%)
Query: 394 CIKEALRLYP--SVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYDP 451
I E LR P + ++R EDV + + V + +RDPEVFP DP
Sbjct: 277 AIDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFP-----DP 331
Query: 452 DRFLSENVAGRNPYAYIPFSAGPRNCIG------ESEIL 484
DR E R+P ++ F GP C G ESE+L
Sbjct: 332 DRIDFE----RSPNPHVSFGFGPHYCPGGMLARLESELL 366
>pdb|3TNK|A Chain A, Crystal Structure Of Mutant I87r In Cyp158a2
pdb|3TNK|B Chain B, Crystal Structure Of Mutant I87r In Cyp158a2
Length = 407
Score = 36.2 bits (82), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 44/99 (44%), Gaps = 17/99 (17%)
Query: 394 CIKEALRLYP--SVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYDP 451
I E LR P + ++R EDV + + V + +RDPEVFP DP
Sbjct: 277 AIDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFP-----DP 331
Query: 452 DRFLSENVAGRNPYAYIPFSAGPRNCIG------ESEIL 484
DR E R+P ++ F GP C G ESE+L
Sbjct: 332 DRIDFE----RSPNPHVSFGFGPHYCPGGMLARLESELL 366
>pdb|1S1F|A Chain A, Crystal Structure Of Streptomyces Coelicolor A3(2)
Cyp158a2 From Antibiotic Biosynthetic Pathways
Length = 406
Score = 36.2 bits (82), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 44/99 (44%), Gaps = 17/99 (17%)
Query: 394 CIKEALRLYP--SVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYDP 451
I E LR P + ++R EDV + + V + +RDPEVFP DP
Sbjct: 277 AIDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFP-----DP 331
Query: 452 DRFLSENVAGRNPYAYIPFSAGPRNCIG------ESEIL 484
DR E R+P ++ F GP C G ESE+L
Sbjct: 332 DRIDFE----RSPNPHVSFGFGPHYCPGGMLARLESELL 366
>pdb|3TZO|A Chain A, The Role Of I87 Of Cyp158a2 In Oxidative Coupling Reaction
pdb|3TZO|B Chain B, The Role Of I87 Of Cyp158a2 In Oxidative Coupling Reaction
Length = 410
Score = 36.2 bits (82), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 44/99 (44%), Gaps = 17/99 (17%)
Query: 394 CIKEALRLYP--SVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYDP 451
I E LR P + ++R EDV + + V + +RDPEVFP DP
Sbjct: 277 AIDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFP-----DP 331
Query: 452 DRFLSENVAGRNPYAYIPFSAGPRNCIG------ESEIL 484
DR E R+P ++ F GP C G ESE+L
Sbjct: 332 DRIDFE----RSPNPHVSFGFGPHYCPGGMLARLESELL 366
>pdb|1T93|A Chain A, Evidence For Multiple Substrate Recognition And Molecular
Mechanism Of C-C Reaction By Cytochrome P450 Cyp158a2
From Streptomyces Coelicolor A3(2)
Length = 406
Score = 36.2 bits (82), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 44/99 (44%), Gaps = 17/99 (17%)
Query: 394 CIKEALRLYP--SVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYDP 451
I E LR P + ++R EDV + + V + +RDPEVFP DP
Sbjct: 277 AIDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFP-----DP 331
Query: 452 DRFLSENVAGRNPYAYIPFSAGPRNCIG------ESEIL 484
DR E R+P ++ F GP C G ESE+L
Sbjct: 332 DRIDFE----RSPNPHVSFGFGPHYCPGGMLARLESELL 366
>pdb|2YJN|B Chain B, Structure Of The Glycosyltransferase Eryciii From The
Erythromycin Biosynthetic Pathway, In Complex With Its
Activating Partner, Erycii
Length = 381
Score = 35.8 bits (81), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 48/101 (47%), Gaps = 3/101 (2%)
Query: 353 LLGSNQEIQNKVYEEILVTSFKALHKPFTTRSLNSMKYLEACIKEALRLYPSVPFIARKL 412
L + N V + +L S + R + + + E LRL+P++ R
Sbjct: 220 LFAGAEMTANTVVDAVLAVSAE---PGLAERIADDPAAAQRTVAEVLRLHPALHLERRTA 276
Query: 413 SEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYDPDR 453
+ +V L ++V+ EV++VV +RDPEVF P+ D DR
Sbjct: 277 TAEVRLGEHVIGEGEEVVVVVAAANRDPEVFAEPDRLDVDR 317
>pdb|2VRV|A Chain A, Structure Of Histidine Tagged Cytochrome P450 Eryk In
Complex With Inhibitor Clotrimazole (Clt)
pdb|2WIO|A Chain A, Structure Of The Histidine Tagged, Open Cytochrome P450
Eryk From S. Erythraea
Length = 431
Score = 35.4 bits (80), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 79/214 (36%), Gaps = 36/214 (16%)
Query: 279 VINERKADLKARRNIEETMEDSAEDVKKRPAFLDLLIEASERHNLSDENIREEVDTFMFE 338
V+N A LKAR E D +D+ R L++ + L DE +
Sbjct: 209 VLNPLTAYLKAR--CAERRADPGDDLISR-----LVLAEVDGRALDDEEAANFSTALLLA 261
Query: 339 GHDTTSAAICWTLLLLGSNQEIQNKVYEEILVTSFKALHKPFTTRSLNSMKYLEACIKEA 398
GH TT+ +LLG+ ++ H + + A ++E
Sbjct: 262 GHITTT-------VLLGNIVRTLDE-------------HPAHWDAAAEDPGRIPAIVEEV 301
Query: 399 LRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYDPDRFLSEN 458
LR P P + R ++ + +P D V V + +RD + P+ +DP R
Sbjct: 302 LRYRPPFPQMQRTTTKATEVAGVPIPADVMVNTWVLSANRDSDAHDDPDRFDPSR----- 356
Query: 459 VAGRNPYAYIPFSAGPRNCIGESEILEREQRKVA 492
A + F G C+G L R + +VA
Sbjct: 357 --KSGGAAQLSFGHGVHFCLGAP--LARLENRVA 386
>pdb|2JJN|A Chain A, Structure Of Closed Cytochrome P450 Eryk
pdb|2JJO|A Chain A, Structure Of Cytochrome P450 Eryk In Complex With Its
Natural Substrate Erd
pdb|2JJP|A Chain A, Structure Of Cytochrome P450 Eryk In Complex With
Inhibitor Ketoconazole (Kc)
pdb|2XFH|A Chain A, Structure Of Cytochrome P450 Eryk Cocrystallized With
Inhibitor Clotrimazole
Length = 411
Score = 35.4 bits (80), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 79/214 (36%), Gaps = 36/214 (16%)
Query: 279 VINERKADLKARRNIEETMEDSAEDVKKRPAFLDLLIEASERHNLSDENIREEVDTFMFE 338
V+N A LKAR E D +D+ R L++ + L DE +
Sbjct: 189 VLNPLTAYLKAR--CAERRADPGDDLISR-----LVLAEVDGRALDDEEAANFSTALLLA 241
Query: 339 GHDTTSAAICWTLLLLGSNQEIQNKVYEEILVTSFKALHKPFTTRSLNSMKYLEACIKEA 398
GH TT+ +LLG+ ++ H + + A ++E
Sbjct: 242 GHITTT-------VLLGNIVRTLDE-------------HPAHWDAAAEDPGRIPAIVEEV 281
Query: 399 LRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYDPDRFLSEN 458
LR P P + R ++ + +P D V V + +RD + P+ +DP R
Sbjct: 282 LRYRPPFPQMQRTTTKATEVAGVPIPADVMVNTWVLSANRDSDAHDDPDRFDPSR----- 336
Query: 459 VAGRNPYAYIPFSAGPRNCIGESEILEREQRKVA 492
A + F G C+G L R + +VA
Sbjct: 337 --KSGGAAQLSFGHGVHFCLGAP--LARLENRVA 366
>pdb|3ABB|A Chain A, Crystal Structure Of Cyp105d6
Length = 408
Score = 35.4 bits (80), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 34/159 (21%), Positives = 65/159 (40%), Gaps = 31/159 (19%)
Query: 334 TFMFEGHDTTSAAICWTLLLLGSNQEIQNKVYEEILVTSFKALHKPFTTRSLNSMKYLEA 393
+ GH+TT AI LG+ IQ+ ++L+ A+
Sbjct: 239 VLLVAGHETTVNAIA-----LGALTLIQHPEQIDVLLRDPGAV---------------SG 278
Query: 394 CIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYDPDR 453
++E LR I R ED+ + + V++ + ++RD + + P+++D
Sbjct: 279 VVEELLRFTSVSDHIVRMAKEDIEVGGATIKAGDAVLVSITLMNRDAKAYENPDIFD--- 335
Query: 454 FLSENVAGRNPYAYIPFSAGPRNCIGESEILEREQRKVA 492
A RN ++ F G C+G++ L R + ++A
Sbjct: 336 ------ARRNARHHVGFGHGIHQCLGQN--LARAELEIA 366
>pdb|3CXY|A Chain A, Crystal Structure Of The Cytochrome P450 Cyp121 P346l
Mutant From M. Tuberculosis
Length = 396
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 41/191 (21%), Positives = 79/191 (41%), Gaps = 39/191 (20%)
Query: 292 NIEETMEDSAEDVKKRPAFLDLLIEASERHNLSDENIREEVDTFMFEGHDTTSAAICWTL 351
NI + ++K PA+ ++SDE TF G +T + + L
Sbjct: 197 NITTGLMGELSRLRKDPAY----------SHVSDELFATIGVTFFGAGVISTGSFLTTAL 246
Query: 352 LLLGSNQEIQNKVYEEILVTSFKALHKPFTTRSLNSMKYLEACIKEALRLYPS-VPFIAR 410
+ L +++N ++E KP + + A ++E LR+ S + R
Sbjct: 247 ISLIQRPQLRNLLHE-----------KP---------ELIPAGVEELLRINLSFADGLPR 286
Query: 411 KLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYDPDRFLSENVAGRNPYAYIPF 470
+ D+ + D ++ + V++++ + DPE FP P + DR NP +++ F
Sbjct: 287 LATADIQVGDVLVRKGELVLVLLEGANFDPEHFPNPGSIELDR--------PNPTSHLAF 338
Query: 471 SAGPRNCIGES 481
G C+G +
Sbjct: 339 GRGQHFCLGSA 349
>pdb|2RCM|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a) At 1.73 A Resolution
pdb|2RCM|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a) At 1.73 A Resolution
pdb|3DSJ|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 13(S)-Hod At 1.60 A
Resolution
pdb|3DSJ|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 13(S)-Hod At 1.60 A
Resolution
pdb|3DSK|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 12r,13s-Vernolic Acid At
1.55 A Resolution
pdb|3DSK|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 12r,13s-Vernolic Acid At
1.55 A Resolution
Length = 495
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/123 (21%), Positives = 57/123 (46%), Gaps = 7/123 (5%)
Query: 356 SNQEIQNKVYEEILVTSFKALHKPFTTRSLNSMKYLEACIKEALRLYPSVPFIARKLSED 415
+ ++ N++ EEI + K+ T ++ M+ ++ + E LR P V + +D
Sbjct: 313 AGHQVHNRLAEEIR-SVIKSNGGELTMGAIEKMELTKSVVYECLRFEPPVTAQYGRAKKD 371
Query: 416 VPLPDYVLPRDTEVIIVVYNLH----RDPEVFPRPELYDPDRFLSENVAGRNPYAYIPFS 471
+ + + + ++Y RDP++F R + + P+RF+ E G ++ +S
Sbjct: 372 LVIESHDAAFKVKAGEMLYGYQPLATRDPKIFDRADEFVPERFVGEE--GEKLLRHVLWS 429
Query: 472 AGP 474
GP
Sbjct: 430 NGP 432
>pdb|2RCH|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hod At 1.85 A Resolution
pdb|2RCH|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hod At 1.85 A Resolution
pdb|2RCL|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 12r,13s-Vernolic Acid At 2.4 A Resolution
pdb|2RCL|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 12r,13s-Vernolic Acid At 2.4 A Resolution
pdb|3CLI|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) At 1.80 A
Resolution
pdb|3CLI|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) At 1.80 A
Resolution
pdb|3DSI|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hot At 1.60 A Resolution
pdb|3DSI|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hot At 1.60 A Resolution
Length = 495
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/123 (21%), Positives = 57/123 (46%), Gaps = 7/123 (5%)
Query: 356 SNQEIQNKVYEEILVTSFKALHKPFTTRSLNSMKYLEACIKEALRLYPSVPFIARKLSED 415
+ ++ N++ EEI + K+ T ++ M+ ++ + E LR P V + +D
Sbjct: 313 AGHQVHNRLAEEIR-SVIKSNGGELTMGAIEKMELTKSVVYECLRFEPPVTAQYGRAKKD 371
Query: 416 VPLPDYVLPRDTEVIIVVYNLH----RDPEVFPRPELYDPDRFLSENVAGRNPYAYIPFS 471
+ + + + ++Y RDP++F R + + P+RF+ E G ++ +S
Sbjct: 372 LVIESHDAAFKVKAGEMLYGYQPLATRDPKIFDRADEFVPERFVGEE--GEKLLRHVLWS 429
Query: 472 AGP 474
GP
Sbjct: 430 NGP 432
>pdb|3B98|A Chain A, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1)
pdb|3B98|B Chain B, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1)
pdb|3B99|A Chain A, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1) In Complex With Substrate Analog
U51605
pdb|3B99|B Chain B, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1) In Complex With Substrate Analog
U51605
Length = 475
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 49/240 (20%), Positives = 95/240 (39%), Gaps = 24/240 (10%)
Query: 258 LSSLYKNHQRCLNTLHSFSYKVIN--ERKADLKARRNIEETMEDSAEDVKKR-PAFLDLL 314
L+ +Y+ +R L + +N E++ AR + + + S D K R ++L
Sbjct: 181 LTQIYEEFRRFDKLLPKLARTTVNKEEKQIASAAREKLWKWLTPSGLDRKPREQSWLGSY 240
Query: 315 IEASERHNLSDENIREEVDTFMFEGHDTTSAAICWTLLLLGSNQEIQNKVYEEILVTSFK 374
++ + + E R + ++ A W + L ++ E V EEI
Sbjct: 241 VKQLQDEGIDAEMQRRAMLLQLWVTQGNAGPAAFWVMGYLLTHPEALRAVREEIQ----G 296
Query: 375 ALHKPFTTRSLNSMKYLEACIKEALRLYPSVPFIARKLSEDVPL-----PDYVLPRDTEV 429
H R N+ ++ + E LRL + I R +++D + +Y L R +
Sbjct: 297 GKHLRLEERQKNT-PVFDSVLWETLRL-TAAALITRDVTQDKKICLSNGQEYHLRRGDRL 354
Query: 430 IIVVY-NLHRDPEVFPRPELYDPDRFLSENV---------AGRNPYAYIPFSAGPRNCIG 479
+ + + DP++ +PE++ DRFL+ + R Y +P+ C G
Sbjct: 355 CVFPFISPQMDPQIHQQPEMFQFDRFLNADRTEKKDFFKNGARVKYPSVPWGTEDNLCPG 414
>pdb|2Z36|A Chain A, Crystal Structure Of Cytochrome P450 Moxa From Nonomuraea
Recticatena (Cyp105)
pdb|2Z36|B Chain B, Crystal Structure Of Cytochrome P450 Moxa From Nonomuraea
Recticatena (Cyp105)
Length = 413
Score = 33.9 bits (76), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 41/187 (21%), Positives = 75/187 (40%), Gaps = 13/187 (6%)
Query: 296 TMEDSAEDVKKRPAFLDLLIEASERHNLSDENIREEVDTFMFEGHDTTSAAICWTLLLLG 355
+MED + A++D LI E D+ ++ EG + + LLL
Sbjct: 186 SMEDRRRAFAELRAYIDDLITRKESEP-GDDLFSRQIARQRQEGTLDHAGLVSLAFLLLT 244
Query: 356 SNQEIQNKVYEEILVTSFKALHKPFTTRSLNSMKYLEACIKEALRLYPSVPFIARKLS-E 414
+ E + + V + + T N + A ++E LR + + +L+ E
Sbjct: 245 AGHETTANMIS-LGVVGLLSHPEQLTVVKANPGRTPMA-VEELLRYFTIADGVTSRLATE 302
Query: 415 DVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYDPDRFLSENVAGRNPYAYIPFSAGP 474
DV + + VI+ + + + DP VF P + D +R ++A F GP
Sbjct: 303 DVEIGGVSIKAGEGVIVSMLSANWDPAVFKDPAVLDVERGARHHLA---------FGFGP 353
Query: 475 RNCIGES 481
C+G++
Sbjct: 354 HQCLGQN 360
>pdb|1CPT|A Chain A, Crystal Structure And Refinement Of Cytochrome P450-Terp
At 2.3 Angstroms Resolution
Length = 428
Score = 33.5 bits (75), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 55/142 (38%), Gaps = 29/142 (20%)
Query: 339 GHDTTSAAICWTLLLLGSNQEIQNKVYEEILVTSFKALHKPFTTRSLNSMKYLEACIKEA 398
GHDTTS++ ++ L N E + L S AL + + EA
Sbjct: 268 GHDTTSSSSGGAIIGLSRNPE------QLALAKSDPAL--------------IPRLVDEA 307
Query: 399 LRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYDPDRFLSEN 458
+R V R D + + R +++ + +RD EVF P+ +D RF
Sbjct: 308 VRWTAPVKSFMRTALADTEVRGQNIKRGDRIMLSYPSANRDEEVFSNPDEFDITRF---- 363
Query: 459 VAGRNPYAYIPFSAGPRNCIGE 480
P ++ F G C+G+
Sbjct: 364 -----PNRHLGFGWGAHMCLGQ 380
>pdb|4DNZ|A Chain A, The Crystal Structures Of Cyp199a4
pdb|4DNZ|B Chain B, The Crystal Structures Of Cyp199a4
pdb|4DNZ|C Chain C, The Crystal Structures Of Cyp199a4
pdb|4DNZ|D Chain D, The Crystal Structures Of Cyp199a4
pdb|4DO1|A Chain A, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a4
pdb|4DO1|B Chain B, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a4
pdb|4DO1|C Chain C, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a4
pdb|4DO1|D Chain D, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a4
pdb|4EGM|A Chain A, The X-ray Crystal Structure Of Cyp199a4 In Complex With
4-ethylbenzoic Acid
pdb|4EGM|B Chain B, The X-ray Crystal Structure Of Cyp199a4 In Complex With
4-ethylbenzoic Acid
pdb|4EGM|C Chain C, The X-ray Crystal Structure Of Cyp199a4 In Complex With
4-ethylbenzoic Acid
pdb|4EGM|D Chain D, The X-ray Crystal Structure Of Cyp199a4 In Complex With
4-ethylbenzoic Acid
pdb|4EGN|A Chain A, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Veratric Acid
pdb|4EGN|B Chain B, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Veratric Acid
pdb|4EGN|C Chain C, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Veratric Acid
pdb|4EGN|D Chain D, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Veratric Acid
pdb|4EGO|A Chain A, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Indole-6- Carboxylic Acid
pdb|4EGO|B Chain B, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Indole-6- Carboxylic Acid
pdb|4EGO|C Chain C, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Indole-6- Carboxylic Acid
pdb|4EGO|D Chain D, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Indole-6- Carboxylic Acid
pdb|4EGP|A Chain A, The X-ray Crystal Structure Of Cyp199a4 In Complex With
2-naphthoic Acid
pdb|4EGP|B Chain B, The X-ray Crystal Structure Of Cyp199a4 In Complex With
2-naphthoic Acid
Length = 410
Score = 33.1 bits (74), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 47/107 (43%), Gaps = 16/107 (14%)
Query: 394 CIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYDPDR 453
+EA+R V R + +V L V+ +V++ + + +RDP + P+LYD R
Sbjct: 285 AFEEAVRFESPVQTFFRTTTREVELGGAVIGEGEKVLMFLGSANRDPRRWSDPDLYDITR 344
Query: 454 FLSENVAGRNPYAYIPFSAGPRNCIG------ESEI-LEREQRKVAT 493
S +V F +G C+G E E+ L RKVA
Sbjct: 345 KTSGHVG---------FGSGVHMCVGQLVARLEGEVMLSALARKVAA 382
>pdb|2WM4|A Chain A, X-Ray Structure Of Mycobacterium Tuberculosis Cytochrome
P450 Cyp124 In Complex With Phytanic Acid
pdb|2WM5|A Chain A, X-Ray Structure Of The Substrate-Free Mycobacterium
Tuberculosis Cytochrome P450 Cyp124
Length = 435
Score = 32.7 bits (73), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 30/143 (20%), Positives = 60/143 (41%), Gaps = 14/143 (9%)
Query: 351 LLLLGSNQEIQNKVYEEILVTSFKALHKPFTTRSLNSMKYLEACIKEALRLYPSVPFIAR 410
LL++ N+ +N + +L S + + + ++E +R V ++ R
Sbjct: 270 LLVVAGNETTRNAITHGVLALSRYPEQRDRWWSDFDGLA--PTAVEEIVRWASPVVYMRR 327
Query: 411 KLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYDPDRFLSENVAGRNPYAYIPF 470
L++D+ L + +V + + +RD F P +D RNP ++ F
Sbjct: 328 TLTQDIELRGTKMAAGDKVSLWYCSANRDESKFADPWTFD---------LARNPNPHLGF 378
Query: 471 SAGPRN-CIGESEILEREQRKVA 492
G + C+G + L R + +VA
Sbjct: 379 GGGGAHFCLGAN--LARREIRVA 399
>pdb|3TKT|A Chain A, Crystal Structure Of Cyp108d1 From Novosphingobium
Aromaticivorans Dsm12444
Length = 450
Score = 32.7 bits (73), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 36/89 (40%), Gaps = 9/89 (10%)
Query: 391 LEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYD 450
L ++EA+R V R + D L + +++ + DP FP P +D
Sbjct: 322 LPGIVEEAIRWTTPVQHFMRTAATDTELCGQKIAAGDWLMLNYVAANHDPAQFPEPRKFD 381
Query: 451 PDRFLSENVAGRNPYAYIPFSAGPRNCIG 479
P R + ++A F AG C+G
Sbjct: 382 PTRPANRHLA---------FGAGSHQCLG 401
>pdb|2XKR|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Cyp142: A
Novel Cholesterol Oxidase
Length = 398
Score = 32.7 bits (73), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 38/89 (42%), Gaps = 9/89 (10%)
Query: 391 LEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYD 450
L I+E LR V + R L+ D L +++++ + + D VF PE +D
Sbjct: 263 LPGAIEEMLRWTAPVKNMCRVLTADTEFHGTALCAGEKMMLLFESANFDEAVFCEPEKFD 322
Query: 451 PDRFLSENVAGRNPYAYIPFSAGPRNCIG 479
RNP +++ F G C+G
Sbjct: 323 ---------VQRNPNSHLAFGFGTHFCLG 342
>pdb|3CXZ|A Chain A, Crystal Structure Of Cytochrome P450 Cyp121 R386l Mutant
From M. Tuberculosis
Length = 396
Score = 32.7 bits (73), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 41/191 (21%), Positives = 78/191 (40%), Gaps = 39/191 (20%)
Query: 292 NIEETMEDSAEDVKKRPAFLDLLIEASERHNLSDENIREEVDTFMFEGHDTTSAAICWTL 351
NI + ++K PA+ ++SDE TF G +T + + L
Sbjct: 197 NITTGLMGELSRLRKDPAY----------SHVSDELFATIGVTFFGAGVISTGSFLTTAL 246
Query: 352 LLLGSNQEIQNKVYEEILVTSFKALHKPFTTRSLNSMKYLEACIKEALRLYPS-VPFIAR 410
+ L +++N ++E KP + + A ++E LR+ S + R
Sbjct: 247 ISLIQRPQLRNLLHE-----------KP---------ELIPAGVEELLRINLSFADGLPR 286
Query: 411 KLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYDPDRFLSENVAGRNPYAYIPF 470
+ D+ + D ++ + V++++ + DPE FP P + DR NP +++ F
Sbjct: 287 LATADIQVGDVLVRKGELVLVLLEGANFDPEHFPNPGSIELDR--------PNPTSHLAF 338
Query: 471 SAGPRNCIGES 481
G C G +
Sbjct: 339 GRGQHFCPGSA 349
>pdb|1N40|A Chain A, Atomic Structure Of Cyp121, A Mycobacterial P450
pdb|1N4G|A Chain A, Structure Of Cyp121, A Mycobacterial P450, In Complex With
Iodopyrazole
pdb|2IJ5|A Chain A, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ5|B Chain B, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ5|C Chain C, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ5|D Chain D, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ5|E Chain E, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ5|F Chain F, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ7|A Chain A, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|2IJ7|B Chain B, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|2IJ7|C Chain C, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|2IJ7|D Chain D, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|2IJ7|E Chain E, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|2IJ7|F Chain F, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|3G5F|A Chain A, Crystallographic Analysis Of Cytochrome P450 Cyp121
pdb|3G5H|A Chain A, Crystallographic Analysis Of Cytochrome P450 Cyp121
pdb|4G44|A Chain A, Structure Of P450 Cyp121 In Complex With Lead Compound
Mb286, 3-((1h- 1,2,4-Triazol-1-Yl)methyl)aniline
pdb|4G45|A Chain A, Structure Of Cytochrome Cyp121 In Complex With
2-Methylquinolin-6- Amine
pdb|4G46|A Chain A, Structure Of Cytochrome P450 Cyp121 In Complex With
4-Oxo-4,5,6,7- Tetrahydrobenzofuran-3-Carboxylate
pdb|4G47|A Chain A, Structure Of Cytochrome P450 Cyp121 In Complex With
4-(1h-1,2,4- Triazol-1-Yl)phenol
pdb|4G48|A Chain A, Structure Of Cyp121 In Complex With
4-(4-Phenoxy-1h-Pyrazol-3-Yl) Benzene-1,3-Diol
Length = 396
Score = 32.7 bits (73), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 41/191 (21%), Positives = 78/191 (40%), Gaps = 39/191 (20%)
Query: 292 NIEETMEDSAEDVKKRPAFLDLLIEASERHNLSDENIREEVDTFMFEGHDTTSAAICWTL 351
NI + ++K PA+ ++SDE TF G +T + + L
Sbjct: 197 NITTGLMGELSRLRKDPAY----------SHVSDELFATIGVTFFGAGVISTGSFLTTAL 246
Query: 352 LLLGSNQEIQNKVYEEILVTSFKALHKPFTTRSLNSMKYLEACIKEALRLYPS-VPFIAR 410
+ L +++N ++E KP + + A ++E LR+ S + R
Sbjct: 247 ISLIQRPQLRNLLHE-----------KP---------ELIPAGVEELLRINLSFADGLPR 286
Query: 411 KLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYDPDRFLSENVAGRNPYAYIPF 470
+ D+ + D ++ + V++++ + DPE FP P + DR NP +++ F
Sbjct: 287 LATADIQVGDVLVRKGELVLVLLEGANFDPEHFPNPGSIELDR--------PNPTSHLAF 338
Query: 471 SAGPRNCIGES 481
G C G +
Sbjct: 339 GRGQHFCPGSA 349
>pdb|3CXV|A Chain A, Crystal Structure Of The Cytochrome P450 Cyp121 A233g
Mutant From Mycobacterium Tuberculosis
Length = 396
Score = 32.3 bits (72), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 41/191 (21%), Positives = 78/191 (40%), Gaps = 39/191 (20%)
Query: 292 NIEETMEDSAEDVKKRPAFLDLLIEASERHNLSDENIREEVDTFMFEGHDTTSAAICWTL 351
NI + ++K PA+ ++SDE TF G +T + + L
Sbjct: 197 NITTGLMGELSRLRKDPAY----------SHVSDELFATIGVTFFGGGVISTGSFLTTAL 246
Query: 352 LLLGSNQEIQNKVYEEILVTSFKALHKPFTTRSLNSMKYLEACIKEALRLYPS-VPFIAR 410
+ L +++N ++E KP + + A ++E LR+ S + R
Sbjct: 247 ISLIQRPQLRNLLHE-----------KP---------ELIPAGVEELLRINLSFADGLPR 286
Query: 411 KLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYDPDRFLSENVAGRNPYAYIPF 470
+ D+ + D ++ + V++++ + DPE FP P + DR NP +++ F
Sbjct: 287 LATADIQVGDVLVRKGELVLVLLEGANFDPEHFPNPGSIELDR--------PNPTSHLAF 338
Query: 471 SAGPRNCIGES 481
G C G +
Sbjct: 339 GRGQHFCPGSA 349
>pdb|4G1X|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Cyp121 In
Complex With 4-(1h-1,2,4-Triazol-1-Yl)quinolin-6-Amine
pdb|4G2G|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Cyp121 In
Complex With 4,4'-(1h-1,2,3-Triazole-1,5-Diyl)diphenol
Length = 395
Score = 32.3 bits (72), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 41/191 (21%), Positives = 78/191 (40%), Gaps = 39/191 (20%)
Query: 292 NIEETMEDSAEDVKKRPAFLDLLIEASERHNLSDENIREEVDTFMFEGHDTTSAAICWTL 351
NI + ++K PA+ ++SDE TF G +T + + L
Sbjct: 196 NITTGLMGELSRLRKDPAY----------SHVSDELFATIGVTFFGAGVISTGSFLTTAL 245
Query: 352 LLLGSNQEIQNKVYEEILVTSFKALHKPFTTRSLNSMKYLEACIKEALRLYPS-VPFIAR 410
+ L +++N ++E KP + + A ++E LR+ S + R
Sbjct: 246 ISLIQRPQLRNLLHE-----------KP---------ELIPAGVEELLRINLSFADGLPR 285
Query: 411 KLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYDPDRFLSENVAGRNPYAYIPF 470
+ D+ + D ++ + V++++ + DPE FP P + DR NP +++ F
Sbjct: 286 LATADIQVGDVLVRKGELVLVLLEGANFDPEHFPNPGSIELDR--------PNPTSHLAF 337
Query: 471 SAGPRNCIGES 481
G C G +
Sbjct: 338 GRGQHFCPGSA 348
>pdb|2RFB|A Chain A, Crystal Structure Of A Cytochrome P450 From The
Thermoacidophilic Archaeon Picrophilus Torridus
pdb|2RFB|B Chain B, Crystal Structure Of A Cytochrome P450 From The
Thermoacidophilic Archaeon Picrophilus Torridus
pdb|2RFB|C Chain C, Crystal Structure Of A Cytochrome P450 From The
Thermoacidophilic Archaeon Picrophilus Torridus
pdb|2RFC|A Chain A, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
pdb|2RFC|B Chain B, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
pdb|2RFC|C Chain C, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
pdb|2RFC|D Chain D, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
Length = 343
Score = 32.3 bits (72), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 29/130 (22%), Positives = 56/130 (43%), Gaps = 17/130 (13%)
Query: 351 LLLLGSNQEIQNKVYEEILVTSFKALHKPFTTRSLNSMKYLEACIKEALRLYPSVPFIAR 410
LL++G N+ N + I V P +++K ++E LR Y + F+
Sbjct: 184 LLIIGGNETTTNLIGNMIRVID----ENPDIID--DALKNRSGFVEETLRYYSPIQFLPH 237
Query: 411 KLS-EDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYDPDRFLSENVAGRNPYAYIP 469
+ + ED + + + + +VI+ + + +RD F P+L+ GR ++
Sbjct: 238 RFAAEDSYINNKKIKKGDQVIVYLGSANRDETFFDEPDLFK---------IGRRE-MHLA 287
Query: 470 FSAGPRNCIG 479
F G C+G
Sbjct: 288 FGIGIHMCLG 297
>pdb|2YOO|A Chain A, Cholest-4-en-3-one Bound Structure Of Cyp142 From
Mycobacterium Smegmatis
pdb|2YOO|B Chain B, Cholest-4-en-3-one Bound Structure Of Cyp142 From
Mycobacterium Smegmatis
pdb|2YOO|C Chain C, Cholest-4-en-3-one Bound Structure Of Cyp142 From
Mycobacterium Smegmatis
pdb|2YOO|D Chain D, Cholest-4-en-3-one Bound Structure Of Cyp142 From
Mycobacterium Smegmatis
pdb|3ZBY|A Chain A, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
pdb|3ZBY|B Chain B, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
pdb|3ZBY|C Chain C, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
pdb|3ZBY|D Chain D, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
pdb|3ZBY|E Chain E, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
pdb|3ZBY|F Chain F, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
Length = 407
Score = 32.3 bits (72), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 63/161 (39%), Gaps = 29/161 (18%)
Query: 319 ERHNLSDENIREEVDTFMFEGHDTTSAAICWTLLLLGSNQEIQNKVYEEILVTSFKALHK 378
E +SD+ I E + G +TT + G+ Q ++++ + LV
Sbjct: 214 EGQRMSDDEIVFETLLILIGGDETTRHTLSG-----GTEQLLRHRDQWDALVAD------ 262
Query: 379 PFTTRSLNSMKYLEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHR 438
+ L I+E LR V + R L+ D L +++++ + +
Sbjct: 263 ---------VDLLPGAIEEMLRWTSPVKNMCRTLTADTVFHGTELRAGEKIMLMFESANF 313
Query: 439 DPEVFPRPELYDPDRFLSENVAGRNPYAYIPFSAGPRNCIG 479
D VF DPD F + RNP +++ F G C+G
Sbjct: 314 DESVF-----GDPDNFRID----RNPNSHVAFGFGTHFCLG 345
>pdb|3CY0|A Chain A, Crystal Structure Of Cytochrome P450 Cyp121 S237a Mutant
From Mycobacterium Tuberculosis
Length = 396
Score = 32.0 bits (71), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 41/191 (21%), Positives = 77/191 (40%), Gaps = 39/191 (20%)
Query: 292 NIEETMEDSAEDVKKRPAFLDLLIEASERHNLSDENIREEVDTFMFEGHDTTSAAICWTL 351
NI + ++K PA+ ++SDE TF G T + + L
Sbjct: 197 NITTGLMGELSRLRKDPAY----------SHVSDELFATIGVTFFGAGVIATGSFLTTAL 246
Query: 352 LLLGSNQEIQNKVYEEILVTSFKALHKPFTTRSLNSMKYLEACIKEALRLYPS-VPFIAR 410
+ L +++N ++E KP + + A ++E LR+ S + R
Sbjct: 247 ISLIQRPQLRNLLHE-----------KP---------ELIPAGVEELLRINLSFADGLPR 286
Query: 411 KLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYDPDRFLSENVAGRNPYAYIPF 470
+ D+ + D ++ + V++++ + DPE FP P + DR NP +++ F
Sbjct: 287 LATADIQVGDVLVRKGELVLVLLEGANFDPEHFPNPGSIELDR--------PNPTSHLAF 338
Query: 471 SAGPRNCIGES 481
G C G +
Sbjct: 339 GRGQHFCPGSA 349
>pdb|3CY1|A Chain A, Crystal Structure Of The Cytochrome P450 Cyp121 S279a
Mutant From M. Tuberculosis
Length = 396
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 41/193 (21%), Positives = 80/193 (41%), Gaps = 43/193 (22%)
Query: 292 NIEETMEDSAEDVKKRPAFLDLLIEASERHNLSDENIREEVDTFMFEGHDTTSAAICWTL 351
NI + ++K PA+ ++SDE TF G +T + + L
Sbjct: 197 NITTGLMGELSRLRKDPAY----------SHVSDELFATIGVTFFGAGVISTGSFLTTAL 246
Query: 352 LLLGSNQEIQNKVYEEILVTSFKALHKPFTTRSLNSMKYLEACIKEALRLYPSVPF---I 408
+ L +++N ++E KP + + A ++E LR+ ++ F +
Sbjct: 247 ISLIQRPQLRNLLHE-----------KP---------ELIPAGVEELLRI--NLAFADGL 284
Query: 409 ARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYDPDRFLSENVAGRNPYAYI 468
R + D+ + D ++ + V++++ + DPE FP P + DR NP +++
Sbjct: 285 PRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFPNPGSIELDR--------PNPTSHL 336
Query: 469 PFSAGPRNCIGES 481
F G C G +
Sbjct: 337 AFGRGQHFCPGSA 349
>pdb|1Z8Q|A Chain A, Ferrous Dioxygen Complex Of The A245t Cytochrome P450eryf
Length = 404
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/89 (23%), Positives = 38/89 (42%), Gaps = 9/89 (10%)
Query: 391 LEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYD 450
L ++E LR R +E+V + +P+ + V++ +RDP+ FP P +D
Sbjct: 274 LPNAVEEILRYIAPPETTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPKQFPDPHRFD 333
Query: 451 PDRFLSENVAGRNPYAYIPFSAGPRNCIG 479
R+ ++ F G C+G
Sbjct: 334 ---------VTRDTRGHLSFGQGIHFCMG 353
>pdb|1Z8P|A Chain A, Ferrous Dioxygen Complex Of The A245s Cytochrome P450eryf
Length = 404
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/89 (23%), Positives = 38/89 (42%), Gaps = 9/89 (10%)
Query: 391 LEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYD 450
L ++E LR R +E+V + +P+ + V++ +RDP+ FP P +D
Sbjct: 274 LPNAVEEILRYIAPPETTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPKQFPDPHRFD 333
Query: 451 PDRFLSENVAGRNPYAYIPFSAGPRNCIG 479
R+ ++ F G C+G
Sbjct: 334 ---------VTRDTRGHLSFGQGIHFCMG 353
>pdb|1JIP|A Chain A, P450eryf(A245s)KETOCONAZOLE
Length = 403
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/89 (23%), Positives = 38/89 (42%), Gaps = 9/89 (10%)
Query: 391 LEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYD 450
L ++E LR R +E+V + +P+ + V++ +RDP+ FP P +D
Sbjct: 273 LPNAVEEILRYIAPPETTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPKQFPDPHRFD 332
Query: 451 PDRFLSENVAGRNPYAYIPFSAGPRNCIG 479
R+ ++ F G C+G
Sbjct: 333 ---------VTRDTRGHLSFGQGIHFCMG 352
>pdb|1Z8O|A Chain A, Ferrous Dioxygen Complex Of The Wild-Type Cytochrome
P450eryf
Length = 404
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/89 (23%), Positives = 38/89 (42%), Gaps = 9/89 (10%)
Query: 391 LEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYD 450
L ++E LR R +E+V + +P+ + V++ +RDP+ FP P +D
Sbjct: 274 LPNAVEEILRYIAPPETTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPKQFPDPHRFD 333
Query: 451 PDRFLSENVAGRNPYAYIPFSAGPRNCIG 479
R+ ++ F G C+G
Sbjct: 334 ---------VTRDTRGHLSFGQGIHFCMG 353
>pdb|1JIO|A Chain A, P450eryf/6deb
Length = 403
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/89 (23%), Positives = 38/89 (42%), Gaps = 9/89 (10%)
Query: 391 LEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYD 450
L ++E LR R +E+V + +P+ + V++ +RDP+ FP P +D
Sbjct: 273 LPNAVEEILRYIAPPETTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPKQFPDPHRFD 332
Query: 451 PDRFLSENVAGRNPYAYIPFSAGPRNCIG 479
R+ ++ F G C+G
Sbjct: 333 ---------VTRDTRGHLSFGQGIHFCMG 352
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 55/111 (49%), Gaps = 10/111 (9%)
Query: 382 TRSLNSMKYLEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPE 441
T S M L+ ++ + P+ P IA E++ PD++ P ++E + + RD
Sbjct: 241 TPSAEFMAALQPTVRNYVENRPAYPGIA---FEEL-FPDWIFPSESERDKIKTSQARD-- 294
Query: 442 VFPRPELYDPDRFLSENVAGRNPYA---YIPFSA-GPRNCIGESEILEREQ 488
+ + + DPD+ +S + A R+PY Y P A P I ++++ ERE
Sbjct: 295 LLSKMLVIDPDKRISVDEALRHPYITVWYDPAEAEAPPPQIYDAQLEEREH 345
>pdb|1EGY|A Chain A, Cytochrome P450eryf With 9-Aminophenanthrene Bound
pdb|1EUP|A Chain A, X-Ray Crystal Structure Of Cytochrome P450eryf With
Androstendione Bound
pdb|1JIN|A Chain A, P450eryfKETOCONAZOLE
pdb|1OXA|A Chain A, Cytochrome P450 (Donor:o2 Oxidoreductase)
Length = 403
Score = 30.8 bits (68), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/89 (23%), Positives = 37/89 (41%), Gaps = 9/89 (10%)
Query: 391 LEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYD 450
L ++E LR R +E+V + +P+ + V++ +RDP FP P +D
Sbjct: 273 LPNAVEEILRYIAPPETTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPSQFPDPHRFD 332
Query: 451 PDRFLSENVAGRNPYAYIPFSAGPRNCIG 479
R+ ++ F G C+G
Sbjct: 333 ---------VTRDTRGHLSFGQGIHFCMG 352
>pdb|2FR7|A Chain A, Crystal Structure Of Cytochrome P450 Cyp199a2
pdb|4DNJ|A Chain A, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a2
Length = 412
Score = 30.4 bits (67), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 45/107 (42%), Gaps = 16/107 (14%)
Query: 394 CIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYDPDR 453
+EA+R V R + DV L + +V++ + + +RDP + P+ YD R
Sbjct: 287 AFEEAVRFESPVQTFFRTTTRDVELAGATIGEGEKVLMFLGSANRDPRRWDDPDRYDITR 346
Query: 454 FLSENVAGRNPYAYIPFSAGPRNCIG------ESE-ILEREQRKVAT 493
S +V F +G C+G E E +L RKVA
Sbjct: 347 KTSGHVG---------FGSGVHMCVGQLVARLEGEVVLAALARKVAA 384
>pdb|3CXX|A Chain A, Crystal Structure Of Cytochrome P450 Cyp121 F338h From M.
Tuberculosis
Length = 396
Score = 29.6 bits (65), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 40/191 (20%), Positives = 77/191 (40%), Gaps = 39/191 (20%)
Query: 292 NIEETMEDSAEDVKKRPAFLDLLIEASERHNLSDENIREEVDTFMFEGHDTTSAAICWTL 351
NI + ++K PA+ ++SDE TF G +T + + L
Sbjct: 197 NITTGLMGELSRLRKDPAY----------SHVSDELFATIGVTFFGAGVISTGSFLTTAL 246
Query: 352 LLLGSNQEIQNKVYEEILVTSFKALHKPFTTRSLNSMKYLEACIKEALRLYPS-VPFIAR 410
+ L +++N ++E KP + + A ++E LR+ S + R
Sbjct: 247 ISLIQRPQLRNLLHE-----------KP---------ELIPAGVEELLRINLSFADGLPR 286
Query: 411 KLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYDPDRFLSENVAGRNPYAYIPF 470
+ D+ + D ++ + V++++ + DPE FP P + DR NP +++
Sbjct: 287 LATADIQVGDVLVRKGELVLVLLEGANFDPEHFPNPGSIELDR--------PNPTSHLAH 338
Query: 471 SAGPRNCIGES 481
G C G +
Sbjct: 339 GRGQHFCPGSA 349
>pdb|2DKK|A Chain A, Structure/function Studies Of Cytochrome P450 158a1 From
Streptomyces Coelicolor A3(2)
Length = 411
Score = 29.6 bits (65), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 35/81 (43%), Gaps = 11/81 (13%)
Query: 408 IARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYDPDRFLSENVAGRNPYAY 467
+AR EDV + + V + +RDP+VFP P+ D D R+P +
Sbjct: 296 LARIALEDVEVHGTRIAAGEPVYVSYLAANRDPDVFPDPDRIDLD---------RDPNPH 346
Query: 468 IPFSAGPRNCIGESEILEREQ 488
+ + G C G +L R Q
Sbjct: 347 LAYGNGHHFCTG--AVLARMQ 365
>pdb|2NZ5|A Chain A, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
pdb|2NZ5|B Chain B, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
pdb|2NZA|A Chain A, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
pdb|2NZA|B Chain B, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
Length = 413
Score = 29.3 bits (64), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 35/81 (43%), Gaps = 11/81 (13%)
Query: 408 IARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYDPDRFLSENVAGRNPYAY 467
+AR EDV + + V + +RDP+VFP P+ D D R+P +
Sbjct: 296 LARIALEDVEVHGTRIAAGEPVYVSYLAANRDPDVFPDPDRIDLD---------RDPNPH 346
Query: 468 IPFSAGPRNCIGESEILEREQ 488
+ + G C G +L R Q
Sbjct: 347 LAYGNGHHFCTG--AVLARMQ 365
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 29.3 bits (64), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 52/111 (46%), Gaps = 10/111 (9%)
Query: 382 TRSLNSMKYLEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPE 441
T S M L+ ++ + P P I K E PD++ P ++E + + RD
Sbjct: 243 TPSAEFMAALQPTVRNYVENRPKYPGI--KFEE--LFPDWIFPSESERDKIKTSQARD-- 296
Query: 442 VFPRPELYDPDRFLSENVAGRNPYA---YIPFSA-GPRNCIGESEILEREQ 488
+ + + DPD+ +S + A R+PY Y P A P I ++++ ERE
Sbjct: 297 LLSKMLVIDPDKRISVDEALRHPYITVWYDPAEAEAPPPQIYDAQLEEREH 347
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.136 0.395
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,981,339
Number of Sequences: 62578
Number of extensions: 546422
Number of successful extensions: 1560
Number of sequences better than 100.0: 188
Number of HSP's better than 100.0 without gapping: 146
Number of HSP's successfully gapped in prelim test: 42
Number of HSP's that attempted gapping in prelim test: 1197
Number of HSP's gapped (non-prelim): 224
length of query: 517
length of database: 14,973,337
effective HSP length: 103
effective length of query: 414
effective length of database: 8,527,803
effective search space: 3530510442
effective search space used: 3530510442
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 54 (25.4 bits)