RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy15843
(517 letters)
>d1po5a_ a.104.1.1 (A:) Mammalian cytochrome p450 2b4 {Rabbit
(Oryctolagus cuniculus) [TaxId: 9986]}
Length = 465
Score = 148 bits (374), Expect = 5e-40
Identities = 88/435 (20%), Positives = 151/435 (34%), Gaps = 48/435 (11%)
Query: 61 PWLGNGLLTSAGHIW---HQRRKILTPAFHFRIL----------EDFVEVFQEQSEVLVR 107
P LGN L + + R+ F + + E +Q+E
Sbjct: 11 PVLGNLLQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIREALVDQAEAFSG 70
Query: 108 RLGEVGVGESINVFPYVTLCTLDIKLQWEEKSMLRATVTQNMSKLSMSIQSVIREFRTIA 167
R I V + I E LR M M +SV + A
Sbjct: 71 R-------GKIAVVDPIFQGYGVIFANGERWRALRRFSLATMRDFGMGKRSVEERIQEEA 123
Query: 168 LLLTLGYFVVRRIKQSRLVKLINRIPGPTSLPVLGNSIECNVDNEETAMGRKINAQDDSN 227
L R + L+ TS + G++ + +D
Sbjct: 124 RCL----VEELRKSKGALLDNTLLFHSITSNII-----------CSIVFGKRFDYKDPVF 168
Query: 228 SEYVKAVYEIGSIIQKRQAKI-HLQPDFLFRLSSLYKNHQRCLNTLHSFSYKVINERKAD 286
+ ++ S+I +++ L FL ++ R L +++F + + + +A
Sbjct: 169 LRLLDLFFQSFSLISSFSSQVFELFSGFLKHFPGTHRQIYRNLQEINTFIGQSVEKHRAT 228
Query: 287 LKARRNIEETMEDSAEDVKKRPAFLDLLIEASERHNLSDENIREEVDTFMFEGHDTTSAA 346
L + K ++ +N+ V + F G +TTS
Sbjct: 229 LDPSNPRDFIDVYLLRMEKD---------KSDPSSEFHHQNLILTVLSLFFAGTETTSTT 279
Query: 347 ICWTLLLLGSNQEIQNKVYEEILVTSFKALHKPFTTRSLNSMKYLEACIKEALRLYPSVP 406
+ + LL+ + +V +EI H+P M Y +A I E RL +P
Sbjct: 280 LRYGFLLMLKYPHVTERVQKEIE--QVIGSHRPPALDDRAKMPYTDAVIHEIQRLGDLIP 337
Query: 407 FIAR-KLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYDPDRFLSENVAGRNPY 465
F +++D YV+P++TEV V+ + DP F P ++P FL N A +
Sbjct: 338 FGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLDANGALKRNE 397
Query: 466 AYIPFSAGPRNCIGE 480
++PFS G R C+GE
Sbjct: 398 GFMPFSLGKRICLGE 412
Score = 43.1 bits (100), Expect = 6e-05
Identities = 17/107 (15%), Positives = 36/107 (33%), Gaps = 3/107 (2%)
Query: 32 LILRPQDGIRPIL-NNSRTIHKSSDYCYIEP-WLGNGLLTSAGHIWHQRRKILTPAFH-F 88
++L D IR L + + ++P + G G++ + G W R+ F
Sbjct: 49 VVLCGTDAIREALVDQAEAFSGRGKIAVVDPIFQGYGVIFANGERWRALRRFSLATMRDF 108
Query: 89 RILEDFVEVFQEQSEVLVRRLGEVGVGESINVFPYVTLCTLDIKLQW 135
+ + VE ++ + G ++ T +I
Sbjct: 109 GMGKRSVEERIQEEARCLVEELRKSKGALLDNTLLFHSITSNIICSI 155
Score = 33.5 bits (75), Expect = 0.067
Identities = 7/28 (25%), Positives = 12/28 (42%)
Query: 1 MLEEKVILANILRRFRVEAVDRREDLTL 28
E + IL+ F + + ED+ L
Sbjct: 416 RTELFLFFTTILQNFSIASPVPPEDIDL 443
Score = 26.6 bits (57), Expect = 9.6
Identities = 9/11 (81%), Positives = 10/11 (90%)
Query: 193 PGPTSLPVLGN 203
PGP+ LPVLGN
Sbjct: 5 PGPSPLPVLGN 15
>d1tqna_ a.104.1.1 (A:) Mammalian cytochrome P450 3a4 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 472
Score = 134 bits (336), Expect = 1e-34
Identities = 71/274 (25%), Positives = 123/274 (44%), Gaps = 20/274 (7%)
Query: 213 ETAMGRKINAQDDSNSEYVKAVYEIGSIIQKRQAKIHLQPDFLFRLSSLYKNHQRCLNTL 272
T+ G I++ ++ +V+ ++ L+ DFL + L
Sbjct: 159 STSFGVNIDSLNNPQDPFVENTKKL------------LRFDFLDPFFLSITVFPFLIPIL 206
Query: 273 HSFSYKVINERKADLKARRNIEETMEDSAEDVKKRPAFLDLLIEASERHN------LSDE 326
+ V + + + K R FL L+I++ LSD
Sbjct: 207 EVLNICVFPREVTNFLRKSVKRMKESRLEDTQKHRVDFLQLMIDSQNSKETESHKALSDL 266
Query: 327 NIREEVDTFMFEGHDTTSAAICWTLLLLGSNQEIQNKVYEEILVTSFKALHKPFTTRSLN 386
+ + F+F G++TTS+ + + + L ++ ++Q K+ EEI + P T ++
Sbjct: 267 ELVAQSIIFIFAGYETTSSVLSFIMYELATHPDVQQKLQEEI--DAVLPNKAPPTYDTVL 324
Query: 387 SMKYLEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRP 446
M+YL+ + E LRL+P + R +DV + +P+ V+I Y LHRDP+ + P
Sbjct: 325 QMEYLDMVVNETLRLFPIAMRLERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEP 384
Query: 447 ELYDPDRFLSENVAGRNPYAYIPFSAGPRNCIGE 480
E + P+RF +N +PY Y PF +GPRNCIG
Sbjct: 385 EKFLPERFSKKNKDNIDPYIYTPFGSGPRNCIGM 418
Score = 45.8 bits (107), Expect = 8e-06
Identities = 18/102 (17%), Positives = 43/102 (42%), Gaps = 2/102 (1%)
Query: 32 LILRPQDGIRPIL-NNSRTIHKSSDYCYIEPWLGNGLLTSAGHIWHQRRKILTPAFHFRI 90
L + D I+ +L ++ + ++ + + + W + R +L+P F
Sbjct: 55 LAITDPDMIKTVLVKECYSVFTNRRPFGPVGFMKSAISIAEDEEWKRLRSLLSPTFTSGK 114
Query: 91 LEDFVEVFQEQSEVLVRRLGEVG-VGESINVFPYVTLCTLDI 131
L++ V + + +VLVR L G+ + + ++D+
Sbjct: 115 LKEMVPIIAQYGDVLVRNLRREAETGKPVTLKDVFGAYSMDV 156
Score = 38.5 bits (88), Expect = 0.002
Identities = 8/42 (19%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Query: 1 MLEEKVILANILRRFRVEAVDRRE-DLTLLGELILRPQDGIR 41
++ K+ L +L+ F + + L L +L+P+ +
Sbjct: 422 LMNMKLALIRVLQNFSFKPCKETQIPLKLSLGGLLQPEKPVV 463
Score = 28.5 bits (62), Expect = 2.1
Identities = 10/15 (66%), Positives = 11/15 (73%)
Query: 192 IPGPTSLPVLGNSIE 206
IPGPT LP LGN +
Sbjct: 11 IPGPTPLPFLGNILS 25
>d3czha1 a.104.1.1 (A:40-502) Vitamin D 25-hydroxylase Cyp2R1 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 463
Score = 121 bits (304), Expect = 1e-30
Identities = 56/267 (20%), Positives = 101/267 (37%), Gaps = 13/267 (4%)
Query: 216 MGRKINAQDDSNSEYVKAVYEIGSIIQKRQAKIHLQPDFL-FRLSSLYKNHQRCLNTLHS 274
G + +D ++ E + ++ ++ ++ R ++
Sbjct: 157 FGERFTYEDTDFQHMIELFSENVELAASASVFLYNAFPWIGILPFGKHQQLFRNAAVVYD 216
Query: 275 FSYKVINERKADLKARRNIEETMEDSAEDVKKRPAFLDLLIEASERHNLSDENIREEVDT 334
F ++I + + + S EN+ V
Sbjct: 217 FLSRLIEKAS---------VNRKPQLPQHFVDAYLDEMDQGKNDPSSTFSKENLIFSVGE 267
Query: 335 FMFEGHDTTSAAICWTLLLLGSNQEIQNKVYEEILVTSFKALHKPFTTRSLNSMKYLEAC 394
+ G +TT+ + W +L + IQ +V +EI + + M Y EA
Sbjct: 268 LIIAGTETTTNVLRWAILFMALYPNIQGQVQKEID--LIMGPNGKPSWDDKCKMPYTEAV 325
Query: 395 IKEALRLYPSVPF-IARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYDPDR 453
+ E LR VP I SED + Y +P+ T VI +Y++H D + + PE++ P+R
Sbjct: 326 LHEVLRFCNIVPLGIFHATSEDAVVRGYSIPKGTTVITNLYSVHFDEKYWRDPEVFHPER 385
Query: 454 FLSENVAGRNPYAYIPFSAGPRNCIGE 480
FL + A +PFS G R+C+GE
Sbjct: 386 FLDSSGYFAKKEALVPFSLGRRHCLGE 412
Score = 34.3 bits (77), Expect = 0.031
Identities = 9/39 (23%), Positives = 16/39 (41%), Gaps = 1/39 (2%)
Query: 1 MLEEKVILANILRRFRVEAVDRRE-DLTLLGELILRPQD 38
+E + +L+RF + DL + L+PQ
Sbjct: 416 RMEMFLFFTALLQRFHLHFPHELVPDLKPRLGMTLQPQP 454
>d1r9oa_ a.104.1.1 (A:) Mammalian cytochrome p450 2c9 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 467
Score = 96.0 bits (237), Expect = 7e-22
Identities = 73/434 (16%), Positives = 143/434 (32%), Gaps = 46/434 (10%)
Query: 61 PWLGNGLLTSAGHIW---HQRRKILTPAFHFRIL----------EDFVEVFQEQSEVLVR 107
P +GN L I K+ P F E E + E
Sbjct: 12 PVIGNILQIGIKDISKSLTNLSKVYGPVFTLYFGLKPIVVLHGYEAVKEALIDLGEEFSG 71
Query: 108 RLGEVGVGESINVFPYVTLCTLDIKLQWEEKSMLRATVTQNMSKLSMSIQSVIREFRTIA 167
R + + ++ +R + M +S+
Sbjct: 72 R-------GIFPLAERANRGFGIVFSNGKKWKEIRRFSLMTLRNFGMGKRSI-------- 116
Query: 168 LLLTLGYFVVRRIKQSRLVKLINRIPGPTSLPVLGNSIECNVDNEETAMGRKINAQDDSN 227
+ + LV+ + + P ++ + +D
Sbjct: 117 -------EDRVQEEARCLVEELRKTKASPCDPTFILGCAPCNVICSIIFHKRFDYKDQQF 169
Query: 228 SEYVKAVYEIGSIIQKRQAKIHLQPDFLFRLSSLYKNHQRCLNTLHSFSYKVINERKADL 287
++ + E I+ +I + + + L +F I E+
Sbjct: 170 LNLMEKLNENIKILSSPWIQI---CNNFSPIIDYFPGTHNKLLKNVAFMKSYILEKV--- 223
Query: 288 KARRNIEETMEDSAEDVKKRPAFLDLLIEASERHNLSDENIREEVDTFMFEGHDTTSAAI 347
+ + E ++ +D + ++ + E++ G +TTS +
Sbjct: 224 --KEHQESMDMNNPQDFIDCFLMKMEKEKHNQPSEFTIESLENTAVDLFGAGTETTSTTL 281
Query: 348 CWTLLLLGSNQEIQNKVYEEILVTSFKALHKPFTTRSLNSMKYLEACIKEALRLYPSVPF 407
+ LLLL + E+ KV EEI ++ + + M Y +A + E R +P
Sbjct: 282 RYALLLLLKHPEVTAKVQEEI--ERVIGRNRSPCMQDRSHMPYTDAVVHEVQRYIDLLPT 339
Query: 408 IARKLS-EDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYDPDRFLSENVAGRNPYA 466
D+ +Y++P+ T ++I + ++ D + FP PE++DP FL E +
Sbjct: 340 SLPHAVTCDIKFRNYLIPKGTTILISLTSVLHDNKEFPNPEMFDPHHFLDEGGNFKKSKY 399
Query: 467 YIPFSAGPRNCIGE 480
++PFSAG R C+GE
Sbjct: 400 FMPFSAGKRICVGE 413
Score = 40.1 bits (92), Expect = 5e-04
Identities = 11/107 (10%), Positives = 33/107 (30%), Gaps = 3/107 (2%)
Query: 32 LILRPQDGIRPIL-NNSRTIHKSSDYCYIE-PWLGNGLLTSAGHIWHQRRKILTPAF-HF 88
++L + ++ L + + E G G++ S G W + R+ +F
Sbjct: 50 VVLHGYEAVKEALIDLGEEFSGRGIFPLAERANRGFGIVFSNGKKWKEIRRFSLMTLRNF 109
Query: 89 RILEDFVEVFQEQSEVLVRRLGEVGVGESINVFPYVTLCTLDIKLQW 135
+ + +E ++ + + + ++
Sbjct: 110 GMGKRSIEDRVQEEARCLVEELRKTKASPCDPTFILGCAPCNVICSI 156
Score = 32.8 bits (73), Expect = 0.090
Identities = 7/41 (17%), Positives = 18/41 (43%), Gaps = 3/41 (7%)
Query: 1 MLEEKVILANILRRFRVEAVDRREDLTL---LGELILRPQD 38
+E + L +IL+ F ++++ ++L + P
Sbjct: 417 GMELFLFLTSILQNFNLKSLVDPKNLDTTPVVNGFASVPPF 457
Score = 27.4 bits (59), Expect = 5.1
Identities = 9/11 (81%), Positives = 10/11 (90%)
Query: 193 PGPTSLPVLGN 203
PGPT LPV+GN
Sbjct: 6 PGPTPLPVIGN 16
>d2ij2a1 a.104.1.1 (A:3-455) Cytochrome P450 bm-3 {Bacillus
megaterium [TaxId: 1404]}
Length = 453
Score = 94.8 bits (234), Expect = 2e-21
Identities = 57/218 (26%), Positives = 101/218 (46%), Gaps = 11/218 (5%)
Query: 269 LNTLHSFSYKVINERKADLKARRN-IEETMEDSAEDVKKRPAFLDLLIEASERHN---LS 324
N + + + D+K + +++ + D ++ L ++ + L
Sbjct: 189 ANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLD 248
Query: 325 DENIREEVDTFMFEGHDTTSAAICWTLLLLGSNQEIQNKVYEEILVTSFKALHKPFTTRS 384
DENIR ++ TF+ GH+TTS + + L L N + K EE + +
Sbjct: 249 DENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLV---DPVPSYKQ 305
Query: 385 LNSMKYLEACIKEALRLYPSVPFIARKLSEDVPLPD-YVLPRDTEVIIVVYNLHRDPEVF 443
+ +KY+ + EALRL+P+ P + ED L Y L + E+++++ LHRD ++
Sbjct: 306 VKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIW 365
Query: 444 -PRPELYDPDRFLSENVAGRNPYAYIPFSAGPRNCIGE 480
E + P+RF EN + +A+ PF G R CIG+
Sbjct: 366 GDDVEEFRPERF--ENPSAIPQHAFKPFGNGQRACIGQ 401
Score = 50.5 bits (119), Expect = 3e-07
Identities = 30/166 (18%), Positives = 58/166 (34%), Gaps = 5/166 (3%)
Query: 32 LILRPQDGIRPILNNSR-TIHKSSDYCYIEPWLGNGLLTSA--GHIWHQRRKILTPAFHF 88
L Q I+ + SR + S ++ + G+GL TS W + IL P+F
Sbjct: 48 RYLSSQRLIKEACDESRFDKNLSQALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQ 107
Query: 89 RILEDFVEVFQEQSEVLVRRLGEVGVGESINVFPYVTLCTLDIKLQWEEKSMLRATVTQN 148
+ ++ + + + + LV++ + E I V +T TLD +
Sbjct: 108 QAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQ 167
Query: 149 MSKLSMSIQSVIREFRTIALLLTLGYFVVRRIKQS--RLVKLINRI 192
S+ + E K+ +K++N +
Sbjct: 168 PHPFITSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDL 213
Score = 35.5 bits (80), Expect = 0.016
Identities = 9/38 (23%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Query: 1 MLEEKVILANILRRFRVEAVDRREDLTLLGELILRPQD 38
+ E ++L +L+ F E +L + L L+P+
Sbjct: 405 LHEATLVLGMMLKHFDFEDHT-NYELDIKETLTLKPEG 441
Score = 28.9 bits (63), Expect = 1.5
Identities = 4/13 (30%), Positives = 6/13 (46%)
Query: 191 RIPGPTSLPVLGN 203
+P P + L N
Sbjct: 2 EMPQPKTFGELKN 14
>d1z8oa1 a.104.1.1 (A:3-404) Cytochrome P450-ERYF {Saccharopolyspora
erythraea [TaxId: 1836]}
Length = 402
Score = 74.5 bits (181), Expect = 5e-15
Identities = 31/178 (17%), Positives = 60/178 (33%), Gaps = 31/178 (17%)
Query: 305 KKRPAFLDLLIEASERHN--LSDENIREEVDTFMFEGHDTTSAAICWTLLLLGSNQEIQN 362
+ L LI + + LS + + + G + + + I LL ++ +
Sbjct: 204 EPGDDLLSALIRVQDDDDGRLSADELTSIALVLLLAGFEASVSLIGIGTYLLLTHPDQLA 263
Query: 363 KVYEEILVTSFKALHKPFTTRSLNSMKYLEACIKEALRLYPSVPFIARKLSEDVPLPDYV 422
V + L ++E LR R +E+V +
Sbjct: 264 LVRRD--------------------PSALPNAVEEILRYIAPPETTTRFAAEEVEIGGVA 303
Query: 423 LPRDTEVIIVVYNLHRDPEVFPRPELYDPDRFLSENVAGRNPYAYIPFSAGPRNCIGE 480
+P+ + V++ +RDP+ FP P +D R ++ F G C+G
Sbjct: 304 IPQYSTVLVANGAANRDPKQFPDPHRFDVTRD---------TRGHLSFGQGIHFCMGR 352
Score = 32.9 bits (73), Expect = 0.10
Identities = 11/42 (26%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
Query: 1 MLEEKVILANILRRF-RVEAVDRREDLTLLGELILRPQDGIR 41
LE +V L + RF + +D+ L+LR D +
Sbjct: 356 KLEGEVALRALFGRFPALSLGIDADDVVWRRSLLLRGIDHLP 397
>d1izoa_ a.104.1.1 (A:) Cytochrome p450 152a1 (Bs-beta) {Bacillus
subtilis [TaxId: 1423]}
Length = 411
Score = 73.9 bits (180), Expect = 8e-15
Identities = 34/237 (14%), Positives = 75/237 (31%), Gaps = 26/237 (10%)
Query: 248 IHLQPDFLFRLSSLYKNHQRCLNTLHSFSYKVINERKADLKARRNIEETMEDSAEDVKKR 307
+ L+ + + + + + +K R + + E
Sbjct: 147 VPLKETEVKERADDFIDMVDAFGAVGPRHWKGRRARPRAEEWIEVMIEDARAGLLKTTSG 206
Query: 308 PAFLDLLIEASERHNLSDENIREEVDTFMFEGHDTTSAAICWTLLLLGSNQEIQNKVYEE 367
A ++ E + D + + S + ++ L L + + + +
Sbjct: 207 TALHEMAFHTQEDGSQLDSRMAAIELINVLRPIVAISYFLVFSALALHEHPKYKEWLRS- 265
Query: 368 ILVTSFKALHKPFTTRSLNSMKYLEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDT 427
+ + E ++E R YP PF+ + +D + + T
Sbjct: 266 ------------------GNSREREMFVQEVRRYYPFGPFLGALVKKDFVWNNCEFKKGT 307
Query: 428 EVIIVVYNLHRDPEVFPRPELYDPDRFLSENVAGRNPYAYIPFSAG----PRNCIGE 480
V++ +Y + DP ++ P+ + P+RF N + IP G C GE
Sbjct: 308 SVLLDLYGTNHDPRLWDHPDEFRPERFAERE---ENLFDMIPQGGGHAEKGHRCPGE 361
Score = 46.6 bits (109), Expect = 5e-06
Identities = 11/100 (11%), Positives = 31/100 (31%), Gaps = 5/100 (5%)
Query: 38 DGIRPILNNSRTIHKSSDYCYI-EPWLG-NGLLTSAGHIWHQRRKILTPAFHFRILEDFV 95
+ + + R +++ + + G N + G R+ + +
Sbjct: 48 EAAKVFYDTDRFQRQNALPKRVQKSLFGVNAIQGMDGSAHIHRKMLFLSLMTPPHQKRLA 107
Query: 96 EVFQEQSEVLVRRLGEVGVGESINVFPYVTLCTLDIKLQW 135
E+ E+ + V R + + + +F + W
Sbjct: 108 ELMTEEWKAAVTRWEKA---DEVVLFEEAKEILCRVACYW 144
Score = 38.9 bits (89), Expect = 0.001
Identities = 5/41 (12%), Positives = 15/41 (36%), Gaps = 1/41 (2%)
Query: 1 MLEEKVILANILRRFRVEAVDRREDLTLLGELILRPQDGIR 41
+ K L ++ + + ++ + L + P+ G
Sbjct: 365 IEVMKASLDFLVHQIEYDVPEQSLHYS-LARMPSLPESGFV 404
>d1cpta_ a.104.1.1 (A:) Cytochrome P450-TERP {Pseudomonas sp.
[TaxId: 306]}
Length = 428
Score = 72.1 bits (175), Expect = 4e-14
Identities = 30/219 (13%), Positives = 63/219 (28%), Gaps = 12/219 (5%)
Query: 262 YKNHQRCLNTLHSFSYKVINERKADLKARRNIEETMEDSAEDVKKRPAFLDLLIEASERH 321
+ L F + +A R++ +E E + + +
Sbjct: 174 EDDEPLMLKLTQDFFGVHEPDEQAVAAPRQSADEAARRFHETIATFYDYFNGFTVDRRSC 233
Query: 322 NLSDENIREEVDTFMFEGHDTTSAAICWTLLLLGSNQEIQNKVYEEILVTSFKALHKPFT 381
D D + + + + I + +
Sbjct: 234 PKDDVMSLLANSKLDGNYIDDKYINAYYVAIATAGHDTTSSSSGGAI---IGLSRNPEQL 290
Query: 382 TRSLNSMKYLEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPE 441
+ + + + EA+R V R D + + R +++ + +RD E
Sbjct: 291 ALAKSDPALIPRLVDEAVRWTAPVKSFMRTALADTEVRGQNIKRGDRIMLSYPSANRDEE 350
Query: 442 VFPRPELYDPDRFLSENVAGRNPYAYIPFSAGPRNCIGE 480
VF P+ +D RF P ++ F G C+G+
Sbjct: 351 VFSNPDEFDITRF---------PNRHLGFGWGAHMCLGQ 380
Score = 28.6 bits (62), Expect = 1.9
Identities = 5/41 (12%), Positives = 11/41 (26%)
Query: 61 PWLGNGLLTSAGHIWHQRRKILTPAFHFRILEDFVEVFQEQ 101
P + + L + R + F + E +
Sbjct: 96 PHVIDSLTSMDPPTHTAYRGLTLNWFQPASIRKLEENIRRI 136
Score = 28.2 bits (61), Expect = 2.3
Identities = 7/43 (16%), Positives = 14/43 (32%), Gaps = 8/43 (18%)
Query: 1 MLEEKVILANILRRFRVEAVDRREDLTLLGELILRPQDGIRPI 43
LE K+ +L + + + L G L + +
Sbjct: 384 KLEMKIFFEELLPKLK--------SVELSGPPRLVATNFVGGP 418
>d1jfba_ a.104.1.1 (A:) Cytochrome P450-NOR, nitric reductase
{Fungus (Fusarium oxysporum) [TaxId: 5507]}
Length = 399
Score = 71.4 bits (173), Expect = 5e-14
Identities = 25/157 (15%), Positives = 48/157 (30%), Gaps = 26/157 (16%)
Query: 324 SDENIREEVDTFMFEGHDTTSAAICWTLLLLGSNQEIQNKVYEEILVTSFKALHKPFTTR 383
+ + + G+ T I + L + + ++
Sbjct: 221 DKSDAVQIAFLLLVAGNATMVNMIALGVATLAQHPDQLAQLKANP--------------- 265
Query: 384 SLNSMKYLEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVF 443
+ + S I R EDV + D ++ + +I + +RD EVF
Sbjct: 266 ----SLAPQFVEELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVF 321
Query: 444 PRPELYDPDRFLSENVAGRNPYAYIPFSAGPRNCIGE 480
P+ ++ +R P + F G CI E
Sbjct: 322 ENPDEFNMNRKW-------PPQDPLGFGFGDHRCIAE 351
Score = 26.7 bits (57), Expect = 7.1
Identities = 2/36 (5%), Positives = 10/36 (27%), Gaps = 1/36 (2%)
Query: 1 MLEEKVILANILRRF-RVEAVDRREDLTLLGELILR 35
E + + + ++F ++ +
Sbjct: 355 KAELTTVFSTLYQKFPDLKVAVPLGKINYTPLNRDV 390
>d1ueda_ a.104.1.1 (A:) p450 monoxygenase OxyC {Amycolatopsis
orientalis [TaxId: 31958]}
Length = 403
Score = 70.2 bits (170), Expect = 1e-13
Identities = 33/239 (13%), Positives = 68/239 (28%), Gaps = 31/239 (12%)
Query: 242 QKRQAKIHLQPDFLFRLSSLYKNHQRCLNTLHSFSYKVINERKADLKARRNIEETMEDSA 301
H + L + R + S + R ++ +
Sbjct: 149 FADPVGAHALCELLGIPRDDQREFVRRIRRNADLSRGLKARAADSAAFNRYLDNLLARQR 208
Query: 302 EDVKKRPAFLDLLIEASERHNLSDENIREEVDTFMFEGHDTTSAAICWTLLLLGSNQEIQ 361
D + N++DE ++ + G +T + I + +L L N
Sbjct: 209 ADPDDGLLGMI---VRDHGDNVTDEELKGLCTALILGGVETVAGMIGFGVLALLDNPGQI 265
Query: 362 NKVYEEILVTSFKALHKPFTTRSLNSMKYLEACIKEALRLYPSVPFIARKLSEDVPLPDY 421
++E + K + L P R +DV +
Sbjct: 266 ELLFE-------------------SPEKAERVVNELVRYLSPVQAPNPRLAIKDVVIDGQ 306
Query: 422 VLPRDTEVIIVVYNLHRDPEVFPRPELYDPDRFLSENVAGRNPYAYIPFSAGPRNCIGE 480
++ V+ + +RD + P P++ D +R + + F G C+G
Sbjct: 307 LIKAGDYVLCSILMANRDEALTPDPDVLDANRA---------AVSDVGFGHGIHYCVGA 356
Score = 48.6 bits (114), Expect = 1e-06
Identities = 19/112 (16%), Positives = 33/112 (29%), Gaps = 11/112 (9%)
Query: 12 LRR----FRVEAVDRREDLTLLGELILRPQDGIRPILNNSRT------IHKSSDYCYIEP 61
LR R+ + + +R IL + +S ++E
Sbjct: 30 LRAHGPLVRIVGESSTQLGRDFVWQAHGYEV-VRRILGDHEHFTTRPQFTQSKSGAHVEA 88
Query: 62 WLGNGLLTSAGHIWHQRRKILTPAFHFRILEDFVEVFQEQSEVLVRRLGEVG 113
+ T + RK+LTP F R + Q + + L G
Sbjct: 89 QFVGQISTYDPPEHTRLRKMLTPEFTVRRIRRMEPAIQSLIDDRLDLLEAEG 140
Score = 28.2 bits (61), Expect = 2.3
Identities = 5/37 (13%), Positives = 12/37 (32%), Gaps = 1/37 (2%)
Query: 1 MLEEKVILANILRRF-RVEAVDRREDLTLLGELILRP 36
++ + RRF + E++ + P
Sbjct: 360 RSMLRMAYQTLWRRFPGLRLAVPIEEVKYRSAFVDCP 396
>d1lfka_ a.104.1.1 (A:) p450 monoxygenase OxyB {Amycolatopsis
orientalis [TaxId: 31958]}
Length = 394
Score = 68.7 bits (166), Expect = 4e-13
Identities = 29/160 (18%), Positives = 49/160 (30%), Gaps = 28/160 (17%)
Query: 321 HNLSDENIREEVDTFMFEGHDTTSAAICWTLLLLGSNQEIQNKVYEEILVTSFKALHKPF 380
+ +DE +R M G D S I +L + + E +
Sbjct: 215 DDATDEELRGFCVQVMLAGDDNISGMIGLGVLAMLRHPEQIDAFRG-------------- 260
Query: 381 TTRSLNSMKYLEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDP 440
+ A + L R ED+ L + + VI + +RDP
Sbjct: 261 -----DEQSAQRAVDELIRYLTVPYSPTPRIAREDLTLAGQEIKKGDSVICSLPAANRDP 315
Query: 441 EVFPRPELYDPDRFLSENVAGRNPYAYIPFSAGPRNCIGE 480
+ P + D R P ++ F G +C+G
Sbjct: 316 ALAPDVDRLDVTR---------EPIPHVAFGHGVHHCLGA 346
Score = 36.3 bits (82), Expect = 0.007
Identities = 10/92 (10%), Positives = 26/92 (28%), Gaps = 11/92 (11%)
Query: 32 LILRPQDGIRPILNNSRT----------IHKSSDYCYIEPWLGNGLLTSAGHIWHQRRKI 81
+ +R ++ + + + L L+ + R+
Sbjct: 40 MATAHAV-VRQVMGDHQQFSTRRRWDPRDEIGGKGIFRPRELVGNLMDYDPPEHTRLRRK 98
Query: 82 LTPAFHFRILEDFVEVFQEQSEVLVRRLGEVG 113
LTP F R ++ ++ + + G
Sbjct: 99 LTPGFTLRKMQRMAPYIEQIVNDRLDEMERAG 130
Score = 27.8 bits (60), Expect = 3.1
Identities = 7/36 (19%), Positives = 12/36 (33%), Gaps = 1/36 (2%)
Query: 1 MLEEKVILANILRRF-RVEAVDRREDLTLLGELILR 35
LE + + + RRF + D +D
Sbjct: 350 RLELRTVFTELWRRFPALRLADPAQDTEFRLTTPAY 385
>d2ciba1 a.104.1.1 (A:5-449) Cytochrome p450 14 alpha-sterol
demethylase (cyp51) {Mycobacterium tuberculosis [TaxId:
1773]}
Length = 445
Score = 67.2 bits (162), Expect = 1e-12
Identities = 26/94 (27%), Positives = 41/94 (43%), Gaps = 1/94 (1%)
Query: 388 MKYLEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPE 447
+ LE +KE LRL+P + + R + + + + V +R PE FP P
Sbjct: 300 IPQLENVLKETLRLHPPLIILMRVAKGEFEVQGHRIHEGDLVAASPAISNRIPEDFPDPH 359
Query: 448 LYDPDRFLSENV-AGRNPYAYIPFSAGPRNCIGE 480
+ P R+ N + +IPF AG C+G
Sbjct: 360 DFVPARYEQPRQEDLLNRWTWIPFGAGRHRCVGA 393
Score = 37.2 bits (84), Expect = 0.004
Identities = 6/42 (14%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Query: 1 MLEEKVILANILRRFRVEAVDRREDL-TLLGELILRPQDGIR 41
+++ K I + +LR + E E +++++
Sbjct: 397 IMQIKAIFSVLLREYEFEMAQPPESYRNDHSKMVVQLAQPAA 438
>d1odoa_ a.104.1.1 (A:) Cyp154a1 monooxygenase {Streptomyces
coelicolor [TaxId: 1902]}
Length = 401
Score = 65.6 bits (158), Expect = 4e-12
Identities = 24/166 (14%), Positives = 51/166 (30%), Gaps = 29/166 (17%)
Query: 316 EASERHNLSDENIREEVDTFMFEGHDTTSAAICWTLLLLGSNQEIQNKVYEEILVTSFKA 375
+ + LS E +R+ + + G++TT I + L + + V +
Sbjct: 214 DEGDGDRLSPEELRDTLLLMISAGYETTVNVIDQAVHTLLTRPDQLALVRK--------- 264
Query: 376 LHKPFTTRSLNSMKYLEACIKEALRLYPSVPFIARKLSEDVPLPD-YVLPRDTEVIIVVY 434
+ + + + R D+ LPD + R ++
Sbjct: 265 ----------GEVTWADVVEETLRHEPAVKHLPLRYAVTDIALPDGRTIARGEPILASYA 314
Query: 435 NLHRDPEVFPRPELYDPDRFLSENVAGRNPYAYIPFSAGPRNCIGE 480
+R P+ + +D R ++ F G C+G
Sbjct: 315 AANRHPDWHEDADTFDATRT---------VKEHLAFGHGVHFCLGA 351
Score = 34.4 bits (77), Expect = 0.028
Identities = 9/41 (21%), Positives = 17/41 (41%), Gaps = 1/41 (2%)
Query: 1 MLEEKVILANILRRF-RVEAVDRREDLTLLGELILRPQDGI 40
+E + L ++ RF + D E+L + LI +
Sbjct: 355 RMEVTLALESLFGRFPDLRLADPAEELPPVPSLISNGHQRL 395
Score = 29.4 bits (64), Expect = 1.2
Identities = 13/88 (14%), Positives = 29/88 (32%), Gaps = 12/88 (13%)
Query: 32 LILRPQDGIRPILNNSRTIHKS-----------SDYCYIEPWLGNGLLTSAGHIWHQRRK 80
+ P ++ +L +S + + + T+ G + R+
Sbjct: 36 SVSDPVL-LKQLLTSSDVSKDARAHWPAFGEVVGTWPLALWVAVENMFTAYGPNHRKLRR 94
Query: 81 ILTPAFHFRILEDFVEVFQEQSEVLVRR 108
++ PAF R ++ + LV R
Sbjct: 95 LVAPAFSARRVDAMRPAVEAMVTGLVDR 122
>d1gwia_ a.104.1.1 (A:) Cyp154c1 monooxygenase {Streptomyces
coelicolor [TaxId: 1902]}
Length = 403
Score = 65.2 bits (157), Expect = 6e-12
Identities = 40/233 (17%), Positives = 72/233 (30%), Gaps = 28/233 (12%)
Query: 249 HLQPDFLFRLSSLYKNHQRCLNTLHSFSYKVINERKADLKARRNIEETMEDSAEDVKKRP 308
L + + L + E A L +I +
Sbjct: 146 MYVVADLMGIEEARLPRLKVLFEKFFSTQTPPEEVVATLTELASIMTDTVAAKRAAPGDD 205
Query: 309 AFLDLLIEASERHNLSDENIREEVDTFMFEGHDTTSAAICWTLLLLGSNQEIQNKVYEEI 368
L+ + +L+D I + + GH+TT + I ++ L ++ E + V
Sbjct: 206 LTSALIQASENGDHLTDAEIVSTLQLMVAAGHETTISLIVNAVVNLSTHPEQRALVLS-- 263
Query: 369 LVTSFKALHKPFTTRSLNSMKYLEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTE 428
++ + P+ + R +EDVP+ D V+P
Sbjct: 264 -----------------GEAEWSAVVEETLRFSTPTSHVLIRFAAEDVPVGDRVIPAGDA 306
Query: 429 VIIVVYNLHRDPEVF-PRPELYDPDRFLSENVAGRNPYAYIPFSAGPRNCIGE 480
+I+ L RD P + +D R + +I F GP C G
Sbjct: 307 LIVSYGALGRDERAHGPTADRFDLTRT--------SGNRHISFGHGPHVCPGA 351
Score = 31.7 bits (70), Expect = 0.21
Identities = 12/53 (22%), Positives = 20/53 (37%)
Query: 61 PWLGNGLLTSAGHIWHQRRKILTPAFHFRILEDFVEVFQEQSEVLVRRLGEVG 113
G +LT G + R ++ A R +E E ++ L+ L G
Sbjct: 79 ANPGRSMLTVDGAEHRRLRTLVAQALTVRRVEHMRGRITELTDRLLDELPADG 131
Score = 31.3 bits (69), Expect = 0.29
Identities = 6/41 (14%), Positives = 13/41 (31%), Gaps = 1/41 (2%)
Query: 1 MLEEKVILANILRRF-RVEAVDRREDLTLLGELILRPQDGI 40
+E V L + RF ++ +L + +
Sbjct: 355 RMEAGVALPALYARFPHLDLAVPAAELRNKPVVTQNDLFEL 395
>d1q5da_ a.104.1.1 (A:) Cytochrome P450epok {Sorangium cellulosum
[TaxId: 56]}
Length = 401
Score = 64.9 bits (156), Expect = 7e-12
Identities = 30/162 (18%), Positives = 50/162 (30%), Gaps = 28/162 (17%)
Query: 319 ERHNLSDENIREEVDTFMFEGHDTTSAAICWTLLLLGSNQEIQNKVYEEILVTSFKALHK 378
+ LS + + V + G DTT I + +L L + E V E +
Sbjct: 220 DGSRLSTKELVALVGAIIAAGTDTTIYLIAFAVLNLLRSPEALELVKAEPGLMRNALDEV 279
Query: 379 PFTTRSLNSMKYLEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHR 438
L A D+ + + V +++ + R
Sbjct: 280 LRFDNILRIGTVRFARQ-------------------DLEYCGASIKKGEMVFLLIPSALR 320
Query: 439 DPEVFPRPELYDPDRFLSENVAGRNPYAYIPFSAGPRNCIGE 480
D VF RP+++D R A + + GP C G
Sbjct: 321 DGTVFSRPDVFDVRRD---------TSASLAYGRGPHVCPGV 353
Score = 29.4 bits (64), Expect = 1.2
Identities = 9/43 (20%), Positives = 15/43 (34%), Gaps = 8/43 (18%)
Query: 1 MLEEKVILANILRRFRVEAVDRREDLTLLGELILRPQDGIRPI 43
LE ++ + I RRF ++ L + R I
Sbjct: 357 RLEAEIAVGTIFRRF--------PEMKLKETPVFGYHPAFRNI 391
>d1io7a_ a.104.1.1 (A:) Cyp119 {Archaeon Sulfolobus solfataricus
[TaxId: 2287]}
Length = 366
Score = 59.1 bits (141), Expect = 5e-10
Identities = 37/169 (21%), Positives = 60/169 (35%), Gaps = 31/169 (18%)
Query: 312 DLLIEASERHNLSDENIREEVDTFMFEGHDTTSAAICWTLLLLGSNQEIQNKVYEEILVT 371
++ NLSD + + G++TT+ I ++
Sbjct: 183 TEVVSRVVNSNLSDIEKLGYIILLLIAGNETTTNLISNSV-------------------- 222
Query: 372 SFKALHKPFTTRSLNSMKYLEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVII 431
+ + + I+EALR P V RK E V L D + V +
Sbjct: 223 --IDFTRFNLWQRIREENLYLKAIEEALRYSPPVMRTVRKTKERVKLGDQTIEEGEYVRV 280
Query: 432 VVYNLHRDPEVFPRPELYDPDRFLSENVAGRNPYAYIPFSAGPRNCIGE 480
+ + +RD EVF E + PDR NP ++ F +G C+G
Sbjct: 281 WIASANRDEEVFHDGEKFIPDR---------NPNPHLSFGSGIHLCLGA 320
>d1s1fa_ a.104.1.1 (A:) Cyp158a2 {Streptomyces coelicolor [TaxId:
1902]}
Length = 399
Score = 58.3 bits (139), Expect = 8e-10
Identities = 28/169 (16%), Positives = 51/169 (30%), Gaps = 9/169 (5%)
Query: 312 DLLIEASERHNLSDENIREEVDTFMFEGHDTTSAAICWTLLLLGSNQEIQNKVYEEILVT 371
+ + S + + T + +LL E ++
Sbjct: 190 AYFSDLIGLRSDSAGEDVTSLLGAAVGRDEITLSEAVGLAVLLQIGGEAVTNNSGQMFHL 249
Query: 372 SFKALHKPFTTRSLNSMKYLEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVII 431
RS ++ + + ++R EDV + + V +
Sbjct: 250 LLSRPELAERLRSEPEIRPRAIDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYV 309
Query: 432 VVYNLHRDPEVFPRPELYDPDRFLSENVAGRNPYAYIPFSAGPRNCIGE 480
+RDPEVFP P+ D +R +P ++ F GP C G
Sbjct: 310 SYLAANRDPEVFPDPDRIDFER---------SPNPHVSFGFGPHYCPGG 349
Score = 29.0 bits (63), Expect = 1.3
Identities = 7/37 (18%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 1 MLEEKVILANILRRF-RVEAVDRREDLTLLGELILRP 36
LE ++++ +L R ++ ED+ ++R
Sbjct: 353 RLESELLVDAVLDRVPGLKLAVAPEDVPFKKGALIRG 389
>d1n40a_ a.104.1.1 (A:) Cyp121 monooxygenase (P450 Mt2)
{Mycobacterium tuberculosis [TaxId: 1773]}
Length = 395
Score = 58.3 bits (139), Expect = 9e-10
Identities = 39/313 (12%), Positives = 88/313 (28%), Gaps = 10/313 (3%)
Query: 170 LTLGYFVVRRI-KQSRLVKLINRIPGPTSLPVLGNSIECNVDNEETAMGRKINAQDDSNS 228
L Y + ++ + R G L L E + A A + +
Sbjct: 43 LVSSYALCTQVLEDRRFSMKETAAAGAPRLNALTVPPEVVNNMGNIADAGLRKAVMKAIT 102
Query: 229 EYVKAVYEIGSIIQKRQAKIHLQPDFLFRLSSLYKNHQRCLNTLHSFSYKVINERKADLK 288
+ + + L + + + + K
Sbjct: 103 PKAPGLEQFLRDTANSLLDNLITEGAPADLRNDFADPLATALHCKVLGIPQEDGPKLFRS 162
Query: 289 ARRNIEETMEDSAEDVKKRPAFLDLLIEASERHNLSDENIREEVDTFMFEGHDTTSAAIC 348
+ + ++ + E N++ + E + S +
Sbjct: 163 LSIAFMSSADPIPAAKINWDRDIEYMAGILENPNITTGLMGELSRLRKDPAYSHVSDELF 222
Query: 349 WTLLLLGSNQEIQNKVYEEILVTSFKALHKPFTTRSLNSMKYLEACIKEALRLYPSVP-F 407
T+ + + + + + A ++E LR+ S
Sbjct: 223 ATIGVTFFGAGVISTGSFLTTALISLIQRPQLRNLLHEKPELIPAGVEELLRINLSFADG 282
Query: 408 IARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYDPDRFLSENVAGRNPYAY 467
+ R + D+ + D ++ + V++++ + DPE FP P + DR NP ++
Sbjct: 283 LPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFPNPGSIELDRP--------NPTSH 334
Query: 468 IPFSAGPRNCIGE 480
+ F G C G
Sbjct: 335 LAFGRGQHFCPGS 347
Score = 28.6 bits (62), Expect = 2.0
Identities = 4/36 (11%), Positives = 12/36 (33%), Gaps = 1/36 (2%)
Query: 1 MLEEKVILANILRRF-RVEAVDRREDLTLLGELILR 35
++ + +L++ V+ + L R
Sbjct: 351 RRHAQIGIEALLKKMPGVDLAVPIDQLVWRTRFQRR 386
>d1ue8a_ a.104.1.1 (A:) Cyp119 {Archaeon Sulfolobus tokodaii [TaxId:
111955]}
Length = 367
Score = 56.4 bits (134), Expect = 3e-09
Identities = 33/188 (17%), Positives = 69/188 (36%), Gaps = 14/188 (7%)
Query: 293 IEETMEDSAEDVKKRPAFLDLLIEASERHNLSDENIREEVDTFMFEGHDTTSAAICWTLL 352
+ + + E +L+L+ + + + ++ + + + + +L
Sbjct: 147 VALRLGRADEIFSIGRKYLELISFSKKELDSRKGKEIVDLTGKIANSNLSELEKEGYFIL 206
Query: 353 LLGSNQEIQNKVYEEILVTSFKALHKPFTTRSLNSMKYLEACIKEALRLYPSVPFIARKL 412
L+ + E + + + + K ++EALR P V R
Sbjct: 207 LMIAGNETTTNLI-----GNAIEDFTLYNSWDYVREKGALKAVEEALRFSPPVMRTIRVT 261
Query: 413 SEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPELYDPDRFLSENVAGRNPYAYIPFSA 472
E V + D V+ V + + + +RD EVF P+ + PDR P ++ F +
Sbjct: 262 KEKVKIRDQVIDEGELVRVWIASANRDEEVFKDPDSFIPDR---------TPNPHLSFGS 312
Query: 473 GPRNCIGE 480
G C+G
Sbjct: 313 GIHLCLGA 320
Score = 31.0 bits (68), Expect = 0.33
Identities = 7/26 (26%), Positives = 16/26 (61%)
Query: 1 MLEEKVILANILRRFRVEAVDRREDL 26
LE ++ L ++FRV+ + ++E +
Sbjct: 324 RLEARIALEEFAKKFRVKEIVKKEKI 349
>d1re9a_ a.104.1.1 (A:) Cytochrome P450-CAM {Pseudomonas putida
[TaxId: 303]}
Length = 404
Score = 55.5 bits (132), Expect = 6e-09
Identities = 41/273 (15%), Positives = 70/273 (25%), Gaps = 14/273 (5%)
Query: 208 NVDNEETAMGRKINAQDDSNSEYVKAVYEIGSIIQKRQAKIHLQPDFLFRLSSLYKNHQR 267
++D E R + Q K I + + Q F R
Sbjct: 92 SMDPPEQRQFRALANQVVGMPVVDKLENRIQELACSLIESLRPQGQCNFTEDYAEPFPIR 151
Query: 268 CLNTLHSFSYKVINERKADLKARRNIEETMEDSAEDVKKRPAFLDLLIEASERHNLSDEN 327
L + I K + +M AE + +L +IE + +D
Sbjct: 152 IFMLLAGLPEEDIPHLKYLTDQMTRPDGSMT-FAEAKEALYDYLIPIIEQRRQKPGTDAI 210
Query: 328 IREEVDTFMFEGHDTTSAAICWTLLLLGSNQEIQNKVYEEILVTSFKALHKPFTTRSLNS 387
T+ A LLL + + + P + L
Sbjct: 211 SIVANGQVNGR-PITSDEAKRMCGLLLVGGLDTV---VNFLSFSMEFLAKSPEHRQELIE 266
Query: 388 MKYLEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEVIIVVYNLHRDPEVFPRPE 447
E L S+ R L+ D L + ++++ D P
Sbjct: 267 RPERIPAACEELLRRFSLVADGRILTSDYEFHGVQLKKGDQILLPQMLSGLDERENACPM 326
Query: 448 LYDPDRFLSENVAGRNPYAYIPFSAGPRNCIGE 480
D R ++ F G C+G+
Sbjct: 327 HVDFSR---------QKVSHTTFGHGSHLCLGQ 350
>d1n97a_ a.104.1.1 (A:) Cyp175a1 {Thermus thermophilus [TaxId: 274]}
Length = 385
Score = 55.5 bits (132), Expect = 7e-09
Identities = 58/292 (19%), Positives = 92/292 (31%), Gaps = 35/292 (11%)
Query: 199 PVLGNSIECNVDNEETAMGRKINAQDDSNSEYVKAVYEIGSIIQKRQAKIHLQPDFLFRL 258
+ G + E RK + + + + L
Sbjct: 73 RLTGRGL-LTDWGESWKEARKALKDPFLPKNVRGYREAMEEEARAFFGEWRGEERDLDHE 131
Query: 259 SSLYKNHQRCLNTLHSFSYKVINERKAD-----LKARRNIEETMEDSAE-----DVKKRP 308
+ E + R+ ++ +AE D
Sbjct: 132 MLALSLRLLGRALFGKPLSPSLAEHALKALDRIMAQTRSPLALLDLAAEARFRKDRGALY 191
Query: 309 AFLDLLIEASERHNLSDENIREEVDTFMFEGHDTTSAAICWTLLLLGSNQEIQNKVYEEI 368
+ LI +L E E T + GH+T ++A+ W+ LLL
Sbjct: 192 REAEALIVHPPLSHLPRERALSEAVTLLVAGHETVASALTWSFLLL-------------- 237
Query: 369 LVTSFKALHKPFTTRSLNSMKYLEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTE 428
+ + R S + A +EALRLYP + R+L + L + LP T
Sbjct: 238 ------SHRPDWQKRVAESEEAALAAFQEALRLYPPAWILTRRLERPLLLGEDRLPPGTT 291
Query: 429 VIIVVYNLHRDPEVFPRPELYDPDRFLSENVAGRNPYAYIPFSAGPRNCIGE 480
+++ Y R FP E + P+RFL E G Y PF G R C+G
Sbjct: 292 LVLSPYVTQRL--HFPDGEAFRPERFLEER--GTPSGRYFPFGLGQRLCLGR 339
Score = 51.3 bits (121), Expect = 1e-07
Identities = 17/66 (25%), Positives = 28/66 (42%)
Query: 38 DGIRPILNNSRTIHKSSDYCYIEPWLGNGLLTSAGHIWHQRRKILTPAFHFRILEDFVEV 97
+G+ L T + Y + G GLLT G W + RK L F + + + E
Sbjct: 50 EGVEGALLAEGTTKATFQYRALSRLTGRGLLTDWGESWKEARKALKDPFLPKNVRGYREA 109
Query: 98 FQEQSE 103
+E++
Sbjct: 110 MEEEAR 115
Score = 40.9 bits (94), Expect = 2e-04
Identities = 12/41 (29%), Positives = 23/41 (56%), Gaps = 3/41 (7%)
Query: 1 MLEEKVILANILRRFRVEAVDRREDLTLLGELILRPQDGIR 41
+LE ++L RRFR++ + +L ++ LRP+ G+
Sbjct: 343 LLEGPIVLRAFFRRFRLDPLP---FPRVLAQVTLRPEGGLP 380
>d1no7a_ e.48.1.1 (A:) Major capsid protein VP5 {Herpes simplex
virus 1 [TaxId: 10298]}
Length = 562
Score = 27.1 bits (60), Expect = 5.8
Identities = 9/34 (26%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 435 NLHRDPEVFPRPELYDPDRFLSENVAGRNPYAYI 468
+L RDP + P P ++D D + R+ +
Sbjct: 241 HLMRDPALLP-PLVWDCDALMRRAALDRHRDCRV 273
>d1iq8a4 d.17.6.1 (A:361-505) Archaeosine tRNA-guanine
transglycosylase, C2 domain {Archaeon Pyrococcus
horikoshii [TaxId: 53953]}
Length = 145
Score = 25.9 bits (57), Expect = 7.7
Identities = 12/59 (20%), Positives = 22/59 (37%), Gaps = 1/59 (1%)
Query: 371 TSFKALHKPFTTRSLNSMKYLEACIKEALRLYPSVPFIARKLSEDVPLPDYVLPRDTEV 429
S ++L P R+ K + E + +P ++R LS P D ++
Sbjct: 11 ISNESLRWPVVRRAKERAKSINERFGELVE-HPIFGRVSRYLSLTYPFAQSEAEDDFKI 68
>d1n83a_ a.123.1.1 (A:) Orphan nuclear receptor ROR-alpha {Human
(Homo sapiens) [TaxId: 9606]}
Length = 251
Score = 26.2 bits (57), Expect = 8.1
Identities = 12/81 (14%), Positives = 27/81 (33%)
Query: 113 GVGESINVFPYVTLCTLDIKLQWEEKSMLRATVTQNMSKLSMSIQSVIREFRTIALLLTL 172
G + I+ + L +E ++ A V + + + + I + + L
Sbjct: 135 GCEDFISFVFEFGKSLCSMHLTEDEIALFSAFVLMSADRSWLQEKVKIEKLQQKIQLALQ 194
Query: 173 GYFVVRRIKQSRLVKLINRIP 193
+ L KLI ++
Sbjct: 195 HVLQKNHREDGILTKLICKVS 215
>d1nq7a_ a.123.1.1 (A:) Orphan nuclear receptor ROR-beta {Rat
(Rattus norvegicus) [TaxId: 10116]}
Length = 244
Score = 26.2 bits (57), Expect = 8.7
Identities = 14/113 (12%), Positives = 35/113 (30%)
Query: 81 ILTPAFHFRILEDFVEVFQEQSEVLVRRLGEVGVGESINVFPYVTLCTLDIKLQWEEKSM 140
++ V E ++ +G + +N ++L EE ++
Sbjct: 95 VVLVRMCRAFNPLNNTVLFEGKYGGMQMFKALGSDDLVNEAFDFAKNLCSLQLTEEEIAL 154
Query: 141 LRATVTQNMSKLSMSIQSVIREFRTIALLLTLGYFVVRRIKQSRLVKLINRIP 193
+ V + + + +++ + + L KLI +IP
Sbjct: 155 FSSAVLISPDRAWLLEPRKVQKLQEKIYFALQHVIQKNHLDDETLAKLIAKIP 207
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.320 0.136 0.395
Gapped
Lambda K H
0.267 0.0393 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,911,282
Number of extensions: 90748
Number of successful extensions: 297
Number of sequences better than 10.0: 1
Number of HSP's gapped: 272
Number of HSP's successfully gapped: 64
Length of query: 517
Length of database: 2,407,596
Length adjustment: 89
Effective length of query: 428
Effective length of database: 1,185,626
Effective search space: 507447928
Effective search space used: 507447928
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.9 bits)