BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy15848
(158 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|242010082|ref|XP_002425805.1| dcapl, putative [Pediculus humanus corporis]
gi|212509738|gb|EEB13067.1| dcapl, putative [Pediculus humanus corporis]
Length = 784
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 59/111 (53%), Gaps = 19/111 (17%)
Query: 50 EPPVPVWTPKSAPSSPSAQRK-FQPVNFKSPTLPRKATGTPNAARKP-----------ES 97
EP PVWTPKSA +SP ++K F+PVNF+SP L RK TP+ R+ E
Sbjct: 45 EPIPPVWTPKSAQASPVLEKKEFRPVNFESPVLSRKKYNTPDEKRESSVPPPWQHTGGEL 104
Query: 98 PTVTKPPT--PRSLPVSPAPSHCNVIPPPTPPPSQGQIPKGASYLEPNMPE 146
P + K P+ SLP +P P+ + +G++P+GA YL M E
Sbjct: 105 PLLAKSPSSPALSLPKAPNPTVTLL-----QKAREGRLPRGAHYLNSEMNE 150
>gi|332029656|gb|EGI69545.1| hypothetical protein G5I_01836 [Acromyrmex echinatior]
Length = 2789
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/152 (34%), Positives = 69/152 (45%), Gaps = 35/152 (23%)
Query: 11 AKTIKPGTWSPATTPEVQRKSLEDSVKEVTEQNKRLDSSEPPVP-VWTPKSAPSSPSAQR 69
A + KPG WSP TP + S E+ K L P+P VWTP SA +SP A+R
Sbjct: 2050 ASSAKPGVWSPGQTPAEKAPS--------PERRKELQKKNEPIPSVWTPASAGASPVAER 2101
Query: 70 K-FQPVNFKSPTLPRK-------------------ATGTPNAARKPESPTVTKPPTPRSL 109
K F+PV+F+SP L RK + N+ P T TPR L
Sbjct: 2102 KEFRPVSFESPVLSRKRQPKEEEALPPWEGEEESGISRIVNSHSAPSQGLNTLASTPR-L 2160
Query: 110 PVSPAPSHCNVIPPPTPPPSQGQIPKGASYLE 141
P + P+ +GQ+PKGA+YLE
Sbjct: 2161 PRAQNPT-----ITLLQKAREGQLPKGAAYLE 2187
>gi|189241652|ref|XP_970771.2| PREDICTED: similar to DCAPL3 [Tribolium castaneum]
Length = 1473
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 68/153 (44%), Gaps = 43/153 (28%)
Query: 17 GTWSPATTPEVQRKSLEDSVKEVTEQNKRLDSSEPPVPVWTPKSAPSSPSAQRK-FQPVN 75
G WSP + Q + VK+ EP PVWTPKSA SSP+ ++K F+PV
Sbjct: 745 GVWSPGQKQDYQPPERQRQVKD-----------EPISPVWTPKSATSSPTVEKKEFRPVK 793
Query: 76 FKSPTLPRKATGTPNAARKP--------------ESPTVTK-PPTPRSLPVSPAPSHCNV 120
F+SP L RK ++P S T+ K PT +S P+S C+
Sbjct: 794 FESPVLSRKNPNKTEGGKEPPWKSPETSSDTGITLSSTLEKRLPTSQSAPIS---GFCD- 849
Query: 121 IPPPTPPPSQ------------GQIPKGASYLE 141
P P +Q GQ+PKGA Y+E
Sbjct: 850 FPATRLPKAQNPTITLLQKAREGQLPKGALYIE 882
>gi|270001097|gb|EEZ97544.1| hypothetical protein TcasGA2_TC011394 [Tribolium castaneum]
Length = 2361
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 58/120 (48%), Gaps = 32/120 (26%)
Query: 50 EPPVPVWTPKSAPSSPSAQRK-FQPVNFKSPTLPRKATGTPNAARKP------------- 95
EP PVWTPKSA SSP+ ++K F+PV F+SP L RK ++P
Sbjct: 676 EPISPVWTPKSATSSPTVEKKEFRPVKFESPVLSRKNPNKTEGGKEPPWKSPETSSDTGI 735
Query: 96 -ESPTVTK-PPTPRSLPVSPAPSHCNVIPPPTPPPSQ------------GQIPKGASYLE 141
S T+ K PT +S P+S C+ P P +Q GQ+PKGA Y+E
Sbjct: 736 TLSSTLEKRLPTSQSAPIS---GFCD-FPATRLPKAQNPTITLLQKAREGQLPKGALYIE 791
>gi|307215182|gb|EFN89954.1| Sorbin and SH3 domain-containing protein 1 [Harpegnathos saltator]
Length = 4470
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 59/119 (49%), Gaps = 25/119 (21%)
Query: 50 EPPVPVWTPKSAPSSPSAQRK-FQPVNFKSPTLPRK-----ATGTP-----NAARKPESP 98
E +PVWTP SA +SP A+RK F+PV F+SP L R+ TP ++K S
Sbjct: 2252 EAILPVWTPASAGASPIAERKEFRPVPFESPVLSRRKQPKEEEATPPWEHEKTSKKQSSQ 2311
Query: 99 TVTKPPTPRSLPVSPAPSHC--NVIPPPTPPPSQ------------GQIPKGASYLEPN 143
++ + R + AP+ ++ P P +Q GQ+PKGA+YLE N
Sbjct: 2312 SIYESSASRIVNSHSAPAQGLNSLASTPRLPRAQNPTITLLQKAREGQLPKGAAYLEEN 2370
>gi|380028397|ref|XP_003697889.1| PREDICTED: uncharacterized protein LOC100867381 [Apis florea]
Length = 965
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 59/122 (48%), Gaps = 27/122 (22%)
Query: 54 PVWTPKSAPSSPSAQRK-FQPVNFKSPTLPRKATGTPNAARK------PESPTVTKPPTP 106
P+WTP SA +SP A++K F+PV F+SPTL RK + ++ E +T+
Sbjct: 193 PIWTPSSAGASPIAEKKEFRPVQFESPTLSRKKVAQQESTQETPPPWEAEKKEITRSSYE 252
Query: 107 ------RSLPVSPAPSHC--NVIPPPTPPPSQ------------GQIPKGASYLEPNMPE 146
R + APS ++ P P +Q GQ+PKGA+YLE N E
Sbjct: 253 SASTSSRIVNSHSAPSQGLNSLSSTPRLPRAQNPTITLLQKAREGQLPKGAAYLEENETE 312
Query: 147 KQ 148
K+
Sbjct: 313 KR 314
>gi|307172917|gb|EFN64084.1| hypothetical protein EAG_02344 [Camponotus floridanus]
Length = 4542
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 66/162 (40%), Gaps = 51/162 (31%)
Query: 14 IKPGTWSPATTPE------VQRKSLEDSVKEVTEQNKRLDSSEPPVPVWTPKSAPSSPSA 67
++ G WSP TP V+ K L+ EP P+WTP SA +SP A
Sbjct: 2218 LEQGVWSPGQTPAGKESSPVRTKELQ---------------KEPIPPIWTPASAGASPVA 2262
Query: 68 QRK-FQPVNFKSPTLPRKATGTPNAARKP-------------ESPTVTKPPTPRSLPVSP 113
+RK F+PV F+SP L RK P + P T R +
Sbjct: 2263 ERKEFRPVAFESPVLSRKK--QPKGEKAPPPWENEEQKSALSSRSVYESSSTSRIVNSHS 2320
Query: 114 APSH-CNVIP-PPTPPPSQ------------GQIPKGASYLE 141
APS N + P P +Q GQ+PKGA+YLE
Sbjct: 2321 APSQGLNALASAPRLPRAQNPTITLLQKAREGQLPKGAAYLE 2362
>gi|383851627|ref|XP_003701333.1| PREDICTED: uncharacterized protein LOC100875671 [Megachile
rotundata]
Length = 963
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 54/116 (46%), Gaps = 26/116 (22%)
Query: 54 PVWTPKSAPSSPSAQRK-FQPVNFKSPTLPRKA----TGTPNA-------ARKPESPTVT 101
PVWTP SA +SP ++K F+PV F+SP L RK T A K E+ T
Sbjct: 192 PVWTPSSAGASPVPEKKEFRPVQFESPILSRKKPTQQETTQEAPPPWEAEEEKKETLRTT 251
Query: 102 KPPTPRSLPVSPAPSHC--NVIPPPTPPPSQ------------GQIPKGASYLEPN 143
+ R + APS ++ P P +Q GQIPKGA+YLE N
Sbjct: 252 IYESSRIVNSHSAPSQGLNSLASTPRLPRAQNPTITLLQKAREGQIPKGAAYLEEN 307
>gi|328780855|ref|XP_393153.4| PREDICTED: hypothetical protein LOC409655 [Apis mellifera]
Length = 966
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 57/125 (45%), Gaps = 29/125 (23%)
Query: 54 PVWTPKSAPSSPSAQRK-FQPVNFKSPTLPRKATGTPNAARK---PESPTVTKPPTPRS- 108
P+WTP SA +SP ++K F+PV F+SPTL RK ++ P V K RS
Sbjct: 193 PIWTPSSAGASPIPEKKEFRPVQFESPTLSRKKLAQQEGTKETPPPWETEVEKKEITRSS 252
Query: 109 ----------LPVSPAPSHC--NVIPPPTPPPSQ------------GQIPKGASYLEPNM 144
+ APS ++ P P +Q GQ+PKGA+YLE N
Sbjct: 253 YESTSTSSRIVNSHSAPSQGLNSLSSTPRLPRAQNPTITLLQKAREGQLPKGAAYLEENE 312
Query: 145 PEKQQ 149
EK+
Sbjct: 313 AEKKH 317
>gi|170042342|ref|XP_001848888.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167865848|gb|EDS29231.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 478
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 43/69 (62%), Gaps = 8/69 (11%)
Query: 14 IKPGTWSPAT-TPEVQRKSLEDSVKEVTEQNKRLDSSEPPVPVWTPKSAPSSPSAQRK-F 71
++ WSP + EV K+ E+ E+++ + PP PVWTP+SAP SP A+R+ F
Sbjct: 5 LQQSVWSPHNRSTEVLTKA------ELAERSRSNNPDPPPQPVWTPRSAPPSPVAERREF 58
Query: 72 QPVNFKSPT 80
+P+ F+SPT
Sbjct: 59 RPIGFESPT 67
>gi|328714703|ref|XP_003245429.1| PREDICTED: hypothetical protein LOC100167639 [Acyrthosiphon pisum]
Length = 1924
Score = 38.5 bits (88), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 44/76 (57%), Gaps = 16/76 (21%)
Query: 15 KPGTWSPATTPEVQRKSLEDSVKEVTEQNKRLDSSEPPV---PVWTPKSAPSSPSAQRK- 70
K WSP E++ KSL+ + +++L+ +P PVWTP S SP+ +RK
Sbjct: 120 KKSVWSP----ELKHKSLD-----LENISRKLEKKQPRTELPPVWTPNS---SPTPERKS 167
Query: 71 FQPVNFKSPTLPRKAT 86
++PV F+SPTL RK T
Sbjct: 168 YKPVRFESPTLSRKLT 183
>gi|348527494|ref|XP_003451254.1| PREDICTED: spectrin beta chain, brain 4-like [Oreochromis niloticus]
Length = 4212
Score = 38.1 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 28/116 (24%), Positives = 47/116 (40%), Gaps = 19/116 (16%)
Query: 43 NKRLDSSEPPVPVWTPKSAPSSPSAQRKF--------------QPVNFKSPTLPRKATGT 88
++R DS P P + P+SPSA R+ + + KSPT +
Sbjct: 3866 DRRSDSPNHPE---KPTTPPNSPSAIRRLVAPTEPPPPPPVKERCIRPKSPT--SRQPDV 3920
Query: 89 PNAARKPESPTVTKPPTPRSLPVSPAPSHCNVIPPPTPPPSQGQIPKGASYLEPNM 144
P + P + +T P P + P++ + + PP+P P Q + EP +
Sbjct: 3921 PGSPAPPAAHDITPPNAPTAAPITKEDNESPDLVPPSPRPRQKSLDLAEGQPEPEV 3976
>gi|194753952|ref|XP_001959269.1| GF12790 [Drosophila ananassae]
gi|190620567|gb|EDV36091.1| GF12790 [Drosophila ananassae]
Length = 3908
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 27/33 (81%), Gaps = 1/33 (3%)
Query: 55 VWTPKSAPSSPSAQRKFQPVNFKSPTLPRKATG 87
VWTP+ +P+ S +++F+PV+F+SPTLPR+ T
Sbjct: 1845 VWTPQPSPA-LSGRKEFRPVHFESPTLPRRYTA 1876
>gi|194857954|ref|XP_001969069.1| GG24159 [Drosophila erecta]
gi|190660936|gb|EDV58128.1| GG24159 [Drosophila erecta]
Length = 4031
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 27/32 (84%), Gaps = 1/32 (3%)
Query: 53 VPVWTPKSAPSSPSAQRKFQPVNFKSPTLPRK 84
+PVWTP+ +P S +++F+PV+F+SPTLPR+
Sbjct: 1874 LPVWTPQPSPV-LSGRKEFRPVHFESPTLPRR 1904
>gi|322789756|gb|EFZ14922.1| hypothetical protein SINV_11574 [Solenopsis invicta]
Length = 423
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 27/37 (72%), Gaps = 1/37 (2%)
Query: 49 SEPPVPVWTPKSAPSSPSAQRK-FQPVNFKSPTLPRK 84
SEP PVW+P SA +SP +RK F+PV F+SP L RK
Sbjct: 24 SEPIPPVWSPASAGASPVPERKEFRPVPFESPVLSRK 60
>gi|24652388|ref|NP_724910.1| CAP, isoform C [Drosophila melanogaster]
gi|21627575|gb|AAM68778.1| CAP, isoform C [Drosophila melanogaster]
gi|27819847|gb|AAO24972.1| RE10170p [Drosophila melanogaster]
Length = 824
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 26/32 (81%), Gaps = 1/32 (3%)
Query: 53 VPVWTPKSAPSSPSAQRKFQPVNFKSPTLPRK 84
+PVWTP+ +P S +++F+PV F+SPTLPR+
Sbjct: 57 LPVWTPQPSPV-LSGRKEFRPVRFESPTLPRR 87
>gi|14669818|dbj|BAB62019.1| DCAPL3 [Drosophila melanogaster]
Length = 824
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 26/32 (81%), Gaps = 1/32 (3%)
Query: 53 VPVWTPKSAPSSPSAQRKFQPVNFKSPTLPRK 84
+PVWTP+ +P S +++F+PV F+SPTLPR+
Sbjct: 57 LPVWTPQPSPV-LSGRKEFRPVRFESPTLPRR 87
>gi|350409487|ref|XP_003488756.1| PREDICTED: hypothetical protein LOC100740896, partial [Bombus
impatiens]
Length = 902
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 52/114 (45%), Gaps = 26/114 (22%)
Query: 54 PVWTPKSAPSSPSAQRK-FQPVNFKSPTLPRKATGTPNAARK---PESPTVTKPPTPRSL 109
PVWTP SA +SP ++K F+PV F+SP L RK + ++ P K T RS
Sbjct: 213 PVWTPSSAGTSPVPEKKEFRPVQFESPILSRKKPAQQESTQEAPPPWETEEEKKETSRSC 272
Query: 110 PVS----------PAPSHCNVIPPPTPPPSQ------------GQIPKGASYLE 141
S P+ ++ P P +Q GQ+PKGA+YLE
Sbjct: 273 YDSSTRIVNSHSAPSQGLSSLSSTPHLPRAQNPTITLLQKAREGQLPKGAAYLE 326
>gi|24652390|ref|NP_724911.1| CAP, isoform F [Drosophila melanogaster]
gi|21627576|gb|AAF58815.2| CAP, isoform F [Drosophila melanogaster]
Length = 811
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 26/32 (81%), Gaps = 1/32 (3%)
Query: 53 VPVWTPKSAPSSPSAQRKFQPVNFKSPTLPRK 84
+PVWTP+ +P S +++F+PV F+SPTLPR+
Sbjct: 44 LPVWTPQPSPV-LSGRKEFRPVRFESPTLPRR 74
>gi|373117315|ref|ZP_09531462.1| YD repeat (two copies) [Lachnospiraceae bacterium 7_1_58FAA]
gi|371668431|gb|EHO33539.1| YD repeat (two copies) [Lachnospiraceae bacterium 7_1_58FAA]
Length = 2761
Score = 37.0 bits (84), Expect = 2.9, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 3/50 (6%)
Query: 86 TGTPNAARKPESPTVTKPPTPRSLPVSPAPSHCNVIPPPTPPPSQGQIPK 135
T TP E+P P P +P P P V P PTP ++ Q+P+
Sbjct: 358 TETPAEPEPTETPA---EPEPTEMPAEPEPIETPVEPEPTPVETEPQVPQ 404
>gi|195475306|ref|XP_002089925.1| GE19353 [Drosophila yakuba]
gi|194176026|gb|EDW89637.1| GE19353 [Drosophila yakuba]
Length = 2104
Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 26/32 (81%), Gaps = 1/32 (3%)
Query: 53 VPVWTPKSAPSSPSAQRKFQPVNFKSPTLPRK 84
+PVWTP+ +P S +++F+PV F+SPTLPR+
Sbjct: 57 LPVWTPQPSPV-LSGRKEFRPVRFESPTLPRR 87
>gi|158285138|ref|XP_001687851.1| AGAP007717-PC [Anopheles gambiae str. PEST]
gi|157019848|gb|EDO64500.1| AGAP007717-PC [Anopheles gambiae str. PEST]
Length = 839
Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 47/83 (56%), Gaps = 11/83 (13%)
Query: 11 AKTIKPGTWSPAT-TPEVQRKSLEDSVKEVTEQNKRLDSSEPP--VPVWTPKSAPSSPSA 67
AKT G WSP + EV K +E+ E++ + S PVWTP+SAP SP+
Sbjct: 17 AKTSSLGVWSPFNRSTEVLTK------EELAERSSSKNKSNTSQQSPVWTPRSAPPSPAT 70
Query: 68 QRK-FQPVNFKSPTLPRKATGTP 89
+R+ F+P+ F+SP P + T TP
Sbjct: 71 ERREFRPIGFESPK-PTRRTLTP 92
>gi|158285136|ref|XP_001687850.1| AGAP007717-PB [Anopheles gambiae str. PEST]
gi|157019847|gb|EDO64499.1| AGAP007717-PB [Anopheles gambiae str. PEST]
Length = 850
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 47/83 (56%), Gaps = 11/83 (13%)
Query: 11 AKTIKPGTWSPAT-TPEVQRKSLEDSVKEVTEQNKRLDSSEPP--VPVWTPKSAPSSPSA 67
AKT G WSP + EV K +E+ E++ + S PVWTP+SAP SP+
Sbjct: 17 AKTSSLGVWSPFNRSTEVLTK------EELAERSSSKNKSNTSQQSPVWTPRSAPPSPAT 70
Query: 68 QRK-FQPVNFKSPTLPRKATGTP 89
+R+ F+P+ F+SP P + T TP
Sbjct: 71 ERREFRPIGFESPK-PTRRTLTP 92
>gi|195333085|ref|XP_002033222.1| GM21206 [Drosophila sechellia]
gi|194125192|gb|EDW47235.1| GM21206 [Drosophila sechellia]
Length = 563
Score = 36.2 bits (82), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 26/32 (81%), Gaps = 1/32 (3%)
Query: 53 VPVWTPKSAPSSPSAQRKFQPVNFKSPTLPRK 84
+P+WTP+ +P S +++F+PV F+SPTLPR+
Sbjct: 108 LPIWTPQPSPV-LSGRKEFRPVRFESPTLPRR 138
>gi|345488740|ref|XP_001605377.2| PREDICTED: hypothetical protein LOC100121771 [Nasonia vitripennis]
Length = 2222
Score = 35.8 bits (81), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 21/34 (61%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Query: 54 PVWTPKSAPSSPSAQRK-FQPVNFKSPTLPRKAT 86
PVWTP SA SP +RK F+PV F+SP L RK T
Sbjct: 1459 PVWTPSSAGPSPVPERKEFRPVPFESPVLSRKKT 1492
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.305 0.125 0.376
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,168,117,605
Number of Sequences: 23463169
Number of extensions: 164397470
Number of successful extensions: 1368768
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 2741
Number of HSP's successfully gapped in prelim test: 31441
Number of HSP's that attempted gapping in prelim test: 1059921
Number of HSP's gapped (non-prelim): 191171
length of query: 158
length of database: 8,064,228,071
effective HSP length: 120
effective length of query: 38
effective length of database: 9,543,615,087
effective search space: 362657373306
effective search space used: 362657373306
T: 11
A: 40
X1: 16 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.9 bits)
S2: 71 (32.0 bits)