RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy15850
(225 letters)
>d1ujya_ b.34.2.1 (A:) Rac/CDC42 GEF 6 {Human (Homo sapiens) [TaxId:
9606]}
Length = 76
Score = 66.4 bits (162), Expect = 3e-15
Identities = 21/41 (51%), Positives = 24/41 (58%)
Query: 79 ELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIP 119
ELS KGDII+V R + W+EG N G FP NYV I
Sbjct: 26 ELSVCKGDIIYVTRVEEGGWWEGTLNGRTGWFPSNYVREIK 66
Score = 26.0 bits (57), Expect = 1.3
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 135 ARAKFNFVAQTHLELSLVK 153
+A+FNF ELS+ K
Sbjct: 13 VKARFNFKQTNEDELSVCK 31
>d1sema_ b.34.2.1 (A:) Growth factor receptor-bound protein 2
(GRB2), N- and C-terminal domains {Caenorhabditis
elegans, SEM-5 [TaxId: 6239]}
Length = 58
Score = 63.5 bits (155), Expect = 2e-14
Identities = 25/63 (39%), Positives = 38/63 (60%), Gaps = 6/63 (9%)
Query: 59 RKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEII 118
K++Q L D + + EL+FK+GD+I + + D NW+EG+ N G+FP NYV
Sbjct: 2 TKFVQALFDFNPQESG----ELAFKRGDVITLINKDDPNWWEGQLNNRRGIFPSNYVC-- 55
Query: 119 PYD 121
PY+
Sbjct: 56 PYN 58
Score = 24.2 bits (53), Expect = 3.2
Identities = 6/19 (31%), Positives = 10/19 (52%)
Query: 135 ARAKFNFVAQTHLELSLVK 153
+A F+F Q EL+ +
Sbjct: 5 VQALFDFNPQESGELAFKR 23
>d1udla_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo
sapiens) [TaxId: 9606]}
Length = 98
Score = 63.8 bits (155), Expect = 4e-14
Identities = 20/41 (48%), Positives = 28/41 (68%)
Query: 79 ELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIP 119
ELSF KG +I V + D +W++GE N + GLFP NYV++
Sbjct: 50 ELSFSKGQLINVMNKDDPDWWQGEINGVTGLFPSNYVKMTT 90
Score = 49.2 bits (117), Expect = 1e-08
Identities = 13/46 (28%), Positives = 21/46 (45%)
Query: 108 GLFPFNYVEIIPYDKIRTAPKKLSEGQARAKFNFVAQTHLELSLVK 153
G FP ++V+++ R P Q A +++ A ELS K
Sbjct: 10 GWFPASHVKLLGPSSERATPAFHPVCQVIAMYDYAANNEDELSFSK 55
>d1gcqa_ b.34.2.1 (A:) Growth factor receptor-bound protein 2
(GRB2), N- and C-terminal domains {Human (Homo sapiens)
[TaxId: 9606]}
Length = 56
Score = 61.6 bits (150), Expect = 8e-14
Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 4/56 (7%)
Query: 61 YLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVE 116
Y+Q L D + EL F++GD I V D NW++G + G+FP NYV
Sbjct: 3 YVQALFDFDPQEDG----ELGFRRGDFIHVMDNSDPNWWKGACHGQTGMFPRNYVT 54
Score = 24.6 bits (54), Expect = 2.3
Identities = 6/19 (31%), Positives = 9/19 (47%)
Query: 135 ARAKFNFVAQTHLELSLVK 153
+A F+F Q EL +
Sbjct: 4 VQALFDFDPQEDGELGFRR 22
>d1u06a1 b.34.2.1 (A:7-61) alpha-Spectrin, SH3 domain {Chicken
(Gallus gallus) [TaxId: 9031]}
Length = 55
Score = 60.9 bits (148), Expect = 2e-13
Identities = 14/40 (35%), Positives = 24/40 (60%)
Query: 79 ELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEII 118
E++ KKGDI+ + +K+W++ E N G P YV+ +
Sbjct: 16 EVTMKKGDILTLLNSTNKDWWKVEVNDRQGFVPAAYVKKL 55
>d1k4us_ b.34.2.1 (S:) p67phox {Human (Homo sapiens) [TaxId: 9606]}
Length = 62
Score = 59.8 bits (145), Expect = 5e-13
Identities = 17/41 (41%), Positives = 26/41 (63%)
Query: 79 ELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIP 119
+L F++GDII V +V++ W EGE +G+FP +VE
Sbjct: 21 DLEFQEGDIILVLSKVNEEWLEGESKGKVGIFPKVFVEDSA 61
Score = 25.9 bits (57), Expect = 1.1
Identities = 7/26 (26%), Positives = 13/26 (50%), Gaps = 1/26 (3%)
Query: 129 KLSEG-QARAKFNFVAQTHLELSLVK 153
+L +G Q A F++ A +L +
Sbjct: 1 QLKKGSQVEALFSYEATQPEDLEFQE 26
>d1utia_ b.34.2.1 (A:) Grb2-related adaptor protein 2 (Mona/Gads)
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 57
Score = 59.3 bits (144), Expect = 6e-13
Identities = 14/40 (35%), Positives = 24/40 (60%)
Query: 79 ELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEII 118
EL F+ G+++ V + +W+ G + +GLFP NYV +
Sbjct: 17 ELGFRSGEVVEVLDSSNPSWWTGRLHNKLGLFPANYVAPM 56
Score = 25.4 bits (56), Expect = 1.4
Identities = 7/19 (36%), Positives = 9/19 (47%)
Query: 135 ARAKFNFVAQTHLELSLVK 153
ARA ++F A EL
Sbjct: 4 ARALYDFEALEEDELGFRS 22
>d1j3ta_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo
sapiens) [TaxId: 9606]}
Length = 74
Score = 59.8 bits (145), Expect = 6e-13
Identities = 20/41 (48%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Query: 79 ELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIP 119
L+F K DII V Q +NW+ GE + G FP +YV+IIP
Sbjct: 26 HLNFSKHDIITVLEQ-QENWWFGEVHGGRGWFPKSYVKIIP 65
Score = 28.2 bits (63), Expect = 0.18
Identities = 5/20 (25%), Positives = 11/20 (55%)
Query: 134 QARAKFNFVAQTHLELSLVK 153
+A+A ++ A+ L+ K
Sbjct: 12 KAQALCSWTAKKDNHLNFSK 31
>d1uhfa_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo
sapiens) [TaxId: 9606]}
Length = 69
Score = 59.8 bits (145), Expect = 6e-13
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Query: 79 ELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEII 118
+L+F +G+ I V Q D W+ G G+FP NYV+
Sbjct: 24 DLTFTEGEEILVT-QKDGEWWTGSIGDRSGIFPSNYVKPK 62
Score = 25.1 bits (55), Expect = 2.4
Identities = 2/20 (10%), Positives = 9/20 (45%)
Query: 134 QARAKFNFVAQTHLELSLVK 153
+ A + + + +L+ +
Sbjct: 10 EYIALYPYSSVEPGDLTFTE 29
>d1ugva_ b.34.2.1 (A:) Olygophrenin-1 like protein (KIAA0621) {Human
(Homo sapiens) [TaxId: 9606]}
Length = 72
Score = 59.5 bits (144), Expect = 7e-13
Identities = 16/42 (38%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Query: 79 ELSFKKGDIIFVRRQVDKN-WYEGEHNAMIGLFPFNYVEIIP 119
ELSF G + + W EG N GL P NYVE +
Sbjct: 26 ELSFTAGTVFDNVHPSQEPGWLEGTLNGKTGLIPENYVEFLS 67
Score = 28.3 bits (63), Expect = 0.16
Identities = 6/20 (30%), Positives = 10/20 (50%)
Query: 134 QARAKFNFVAQTHLELSLVK 153
+A+A + A+ ELS
Sbjct: 12 KAKALYACKAEHDSELSFTA 31
>d1ycsb2 b.34.2.1 (B:457-519) 53BP2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 63
Score = 59.4 bits (144), Expect = 7e-13
Identities = 12/44 (27%), Positives = 21/44 (47%), Gaps = 3/44 (6%)
Query: 79 ELSFKKGDIIFVRRQVDKN---WYEGEHNAMIGLFPFNYVEIIP 119
EL K+GD + + + D++ W+ N G P N + + P
Sbjct: 20 ELPMKEGDCMTIIHREDEDEIEWWWARLNDKEGYVPRNLLGLYP 63
Score = 28.6 bits (64), Expect = 0.11
Identities = 5/24 (20%), Positives = 13/24 (54%)
Query: 130 LSEGQARAKFNFVAQTHLELSLVK 153
+++G A +++ Q EL + +
Sbjct: 2 MNKGVIYALWDYEPQNDDELPMKE 25
>d1uj0a_ b.34.2.1 (A:) Signal transducing adaptor molecule Stam2
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 58
Score = 58.9 bits (143), Expect = 9e-13
Identities = 18/38 (47%), Positives = 26/38 (68%)
Query: 79 ELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVE 116
EL+FK G++I V D NW++GE++ GLFP N+V
Sbjct: 18 ELTFKHGELITVLDDSDANWWQGENHRGTGLFPSNFVT 55
Score = 24.2 bits (53), Expect = 3.4
Identities = 6/19 (31%), Positives = 9/19 (47%)
Query: 135 ARAKFNFVAQTHLELSLVK 153
RA ++F A EL+
Sbjct: 5 VRALYDFEAVEDNELTFKH 23
>d1gria1 b.34.2.1 (A:1-56) Growth factor receptor-bound protein 2
(GRB2), N- and C-terminal domains {Human (Homo sapiens)
[TaxId: 9606]}
Length = 56
Score = 56.6 bits (137), Expect = 7e-12
Identities = 20/40 (50%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Query: 79 ELSFKKGDIIFV-RRQVDKNWYEGEHNAMIGLFPFNYVEI 117
ELSFK+GDI+ V + D+NWY+ E N G P NY+E+
Sbjct: 16 ELSFKRGDILKVLNEECDQNWYKAELNGKDGFIPKNYIEM 55
Score = 27.4 bits (61), Expect = 0.22
Identities = 8/20 (40%), Positives = 12/20 (60%)
Query: 134 QARAKFNFVAQTHLELSLVK 153
+A AK++F A ELS +
Sbjct: 2 EAIAKYDFKATADDELSFKR 21
>d1oota_ b.34.2.1 (A:) Hypothetical protein YFR024c {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 58
Score = 56.3 bits (136), Expect = 8e-12
Identities = 17/42 (40%), Positives = 27/42 (64%), Gaps = 2/42 (4%)
Query: 79 ELSFKKGDIIFVRRQVDKN--WYEGEHNAMIGLFPFNYVEII 118
+L F+KGD+I + ++ D W+ G N G+FP NYVE++
Sbjct: 17 DLPFRKGDVITILKKSDSQNDWWTGRVNGREGIFPANYVELV 58
Score = 26.3 bits (58), Expect = 0.73
Identities = 5/20 (25%), Positives = 10/20 (50%)
Query: 134 QARAKFNFVAQTHLELSLVK 153
+A A ++F + +L K
Sbjct: 3 KAVALYSFAGEESGDLPFRK 22
>d1jo8a_ b.34.2.1 (A:) Actin binding protein ABP1 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 58
Score = 55.9 bits (135), Expect = 1e-11
Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Query: 79 ELSFKKGDIIFVRRQVDKNWYEGEH--NAMIGLFPFNYVEII 118
EL+F + D I VD +W+ GE + GLFP NYV +
Sbjct: 16 ELTFVENDKIINIEFVDDDWWLGELEKDGSKGLFPSNYVSLG 57
Score = 25.5 bits (56), Expect = 1.3
Identities = 6/20 (30%), Positives = 12/20 (60%)
Query: 134 QARAKFNFVAQTHLELSLVK 153
A A++++ A EL+ V+
Sbjct: 2 WATAEYDYDAAEDNELTFVE 21
>d1ckaa_ b.34.2.1 (A:) C-Crk, N-terminal SH3 domain {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 57
Score = 55.5 bits (134), Expect = 1e-11
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 5/58 (8%)
Query: 60 KYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEH-NAMIGLFPFNYVE 116
+Y++ L D + +L FKKGDI+ +R + ++ W+ E G+ P YVE
Sbjct: 2 EYVRALFDFNGNDEE----DLPFKKGDILRIRDKPEEQWWNAEDSEGKRGMIPVPYVE 55
Score = 24.7 bits (54), Expect = 2.7
Identities = 6/19 (31%), Positives = 8/19 (42%)
Query: 135 ARAKFNFVAQTHLELSLVK 153
RA F+F +L K
Sbjct: 4 VRALFDFNGNDEEDLPFKK 22
>d1uffa_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo
sapiens) [TaxId: 9606]}
Length = 93
Score = 56.2 bits (135), Expect = 2e-11
Identities = 19/58 (32%), Positives = 23/58 (39%), Gaps = 2/58 (3%)
Query: 79 ELSFKKGDIIFVRRQVD--KNWYEGEHNAMIGLFPFNYVEIIPYDKIRTAPKKLSEGQ 134
E+SF GDII V + W G G FP NYVE +P + A
Sbjct: 21 EMSFNSGDIIQVDEKTVGEPGWLYGSFQGNFGWFPCNYVEKMPSSENEKAVSPKKALL 78
Score = 26.6 bits (58), Expect = 0.88
Identities = 7/20 (35%), Positives = 10/20 (50%)
Query: 134 QARAKFNFVAQTHLELSLVK 153
RA + F A+ H E+S
Sbjct: 7 GYRALYPFEARNHDEMSFNS 26
>d1arka_ b.34.2.1 (A:) SH3 domain from nebulin {Human (Homo sapiens)
[TaxId: 9606]}
Length = 60
Score = 55.1 bits (133), Expect = 3e-11
Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Query: 79 ELSFKKGDIIFVRRQVDKNWYEGEH--NAMIGLFPFNYVEII 118
E+SFK GD I + +D+ W G G+ P NYVE I
Sbjct: 19 EVSFKDGDAIINVQAIDEGWMYGTVQRTGRTGMLPANYVEAI 60
Score = 23.9 bits (52), Expect = 4.7
Identities = 6/24 (25%), Positives = 13/24 (54%), Gaps = 1/24 (4%)
Query: 131 SEGQ-ARAKFNFVAQTHLELSLVK 153
+ G+ RA ++++A E+S
Sbjct: 1 TAGKIFRAMYDYMAADADEVSFKD 24
>d2hspa_ b.34.2.1 (A:) Phospholipase C, SH3 domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 71
Score = 55.2 bits (133), Expect = 3e-11
Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Query: 79 ELSFKKGDIIFVRRQVDKNWYEGEHNAMI-GLFPFNYVEIIP 119
EL+F K II + + W+ G++ FP NYVE +
Sbjct: 22 ELTFIKSAIIQNVEKQEGGWWRGDYGGKKQLWFPSNYVEEMV 63
Score = 26.3 bits (58), Expect = 0.83
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 134 QARAKFNFVAQTHLELSLVK 153
+A F++ AQ EL+ +K
Sbjct: 8 AVKALFDYKAQREDELTFIK 27
>d1uhca_ b.34.2.1 (A:) Hypothetical protein Baa76854.1 (KIAA1010)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 79
Score = 55.3 bits (133), Expect = 4e-11
Identities = 11/45 (24%), Positives = 15/45 (33%), Gaps = 4/45 (8%)
Query: 79 ELSFKKGDIIFVRRQVDK----NWYEGEHNAMIGLFPFNYVEIIP 119
ELS + + D W+ E N G P NY+
Sbjct: 29 ELSVSANQKLKILEFKDVTGNTEWWLAEVNGKKGYVPSNYIRKTE 73
>d1spka_ b.34.2.1 (A:) BAI1-associated protein 2-like 1 (RIKEN cDNA
1300006m19) {Mouse (Mus musculus) [TaxId: 10090]}
Length = 72
Score = 54.5 bits (131), Expect = 5e-11
Identities = 11/63 (17%), Positives = 30/63 (47%), Gaps = 6/63 (9%)
Query: 60 KYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWY---EGEHNAMIGLFPFNYVE 116
+ ++ + ++ + LSF +GD++ + +K+ + E + G FP +Y +
Sbjct: 8 QKVKTIFPHTAGNNKT---LLSFAQGDVLTLLIPEEKDGWLYGEHDTTKARGWFPSSYTK 64
Query: 117 IIP 119
++
Sbjct: 65 LLS 67
>d1ue9a_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo
sapiens) [TaxId: 9606]}
Length = 80
Score = 54.5 bits (131), Expect = 6e-11
Identities = 12/46 (26%), Positives = 24/46 (52%), Gaps = 5/46 (10%)
Query: 79 ELSFKKGDIIFVRRQVDKNWYEGEHNA-----MIGLFPFNYVEIIP 119
+LS G +I + ++ W++GE A G FP ++V+++
Sbjct: 23 QLSLAPGQLILILKKNTSGWWQGELQARGKKRQKGWFPASHVKLLG 68
Score = 25.7 bits (56), Expect = 1.7
Identities = 8/24 (33%), Positives = 12/24 (50%), Gaps = 1/24 (4%)
Query: 131 SEGQ-ARAKFNFVAQTHLELSLVK 153
S G+ A+ +VA +LSL
Sbjct: 5 SSGEIAQVTSAYVASGSEQLSLAP 28
>d1opka1 b.34.2.1 (A:83-139) Abl tyrosine kinase, SH3 domain {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 57
Score = 54.0 bits (130), Expect = 7e-11
Identities = 11/41 (26%), Positives = 16/41 (39%), Gaps = 1/41 (2%)
Query: 79 ELSFKKGDIIFVRRQVD-KNWYEGEHNAMIGLFPFNYVEII 118
LS KG+ + V W E + G P NY+ +
Sbjct: 16 TLSITKGEKLRVLGYNHNGEWCEAQTKNGQGWVPSNYITPV 56
>d1awwa_ b.34.2.1 (A:) Bruton's tyrosine kinase {Human (Homo
sapiens) [TaxId: 9606]}
Length = 67
Score = 54.0 bits (130), Expect = 8e-11
Identities = 12/42 (28%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Query: 79 ELSFKKGDIIFVRRQVDKNWYEG-EHNAMIGLFPFNYVEIIP 119
+L +KGD F+ + + W+ + N G P NYV
Sbjct: 24 DLQLRKGDEYFILEESNLPWWRARDKNGQEGYIPSNYVTEAE 65
Score = 24.0 bits (52), Expect = 5.2
Identities = 4/20 (20%), Positives = 10/20 (50%)
Query: 134 QARAKFNFVAQTHLELSLVK 153
+ A ++++ +L L K
Sbjct: 10 KVVALYDYMPMNANDLQLRK 29
>d2v1ra1 b.34.2.1 (A:10-76) Peroxisomal membrane protein Pex13p
{Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 67
Score = 53.7 bits (129), Expect = 1e-10
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 6/47 (12%)
Query: 78 TELSFKKGDIIFVRRQVDKN------WYEGEHNAMIGLFPFNYVEII 118
E++ KKGD++ + + D W N IG P+NY+EII
Sbjct: 21 MEVALKKGDLMAILSKKDPLGRDSDWWKVRTKNGNIGYIPYNYIEII 67
>d1qcfa1 b.34.2.1 (A:80-145) Hemapoetic cell kinase Hck {Human (Homo
sapiens) [TaxId: 9606]}
Length = 65
Score = 52.9 bits (127), Expect = 2e-10
Identities = 13/41 (31%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Query: 79 ELSFKKGDIIFVRRQVDKNWY-EGEHNAMIGLFPFNYVEII 118
+LSF+KGD + V + + W G P NYV +
Sbjct: 20 DLSFQKGDQMVVLEESGEWWKARSLATRKEGYIPSNYVARV 60
>d2iima1 b.34.2.1 (A:58-119) p56-lck tyrosine kinase, SH3 domain
{Human (Homo sapiens) [TaxId: 9606]}
Length = 62
Score = 52.5 bits (126), Expect = 2e-10
Identities = 11/39 (28%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Query: 79 ELSFKKGDIIFVRRQVDKNWY-EGEHNAMIGLFPFNYVE 116
+L F+KG+ + + Q + W + G PFN+V
Sbjct: 22 DLGFEKGEQLRILEQSGEWWKAQSLTTGQEGFIPFNFVA 60
Score = 26.0 bits (57), Expect = 1.0
Identities = 4/24 (16%), Positives = 8/24 (33%)
Query: 130 LSEGQARAKFNFVAQTHLELSLVK 153
L + A ++ +L K
Sbjct: 4 LQDNLVIALHSYEPSHDGDLGFEK 27
>d1ng2a2 b.34.2.1 (A:215-332) p47pox (neutrophil cytosolic factor 1)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 118
Score = 54.3 bits (130), Expect = 2e-10
Identities = 10/45 (22%), Positives = 21/45 (46%)
Query: 78 TELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEIIPYDK 122
E+S +G+ + V ++ W+ + + G FP Y++ D
Sbjct: 29 DEVSLLEGEAVEVIHKLLDGWWVIRKDDVTGYFPSMYLQKSGQDV 73
>d1k9aa1 b.34.2.1 (A:6-76) Carboxyl-terminal src kinase (csk) {Human
(Homo sapiens) [TaxId: 9606]}
Length = 71
Score = 52.5 bits (126), Expect = 3e-10
Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
Query: 79 ELSFKKGDII-FVRRQVDKNWYEGEHNA-MIGLFPFNYVEIIPYDKIRTAPK 128
+L F KGD++ V D NWY+ ++ G+ P NYV+ + ++ K
Sbjct: 22 DLPFCKGDVLTIVAVTKDPNWYKAKNKVGREGIIPANYVQ--KREGVKAGTK 71
Score = 27.1 bits (60), Expect = 0.40
Identities = 6/20 (30%), Positives = 9/20 (45%)
Query: 134 QARAKFNFVAQTHLELSLVK 153
+ AK+NF +L K
Sbjct: 8 ECIAKYNFHGTAEQDLPFCK 27
>d1fmka1 b.34.2.1 (A:82-145) c-src protein tyrosine kinase {Human
(Homo sapiens) [TaxId: 9606]}
Length = 64
Score = 51.7 bits (124), Expect = 6e-10
Identities = 12/42 (28%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 79 ELSFKKGDIIFVRRQVDKNWYEGEH--NAMIGLFPFNYVEII 118
+LSFKKG+ + + + +W+ G P NYV
Sbjct: 18 DLSFKKGERLQIVNNTEGDWWLAHSLSTGQTGYIPSNYVAPS 59
>d1efna_ b.34.2.1 (A:) Fyn proto-oncogene tyrosine kinase, SH3
domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 57
Score = 51.3 bits (123), Expect = 7e-10
Identities = 12/40 (30%), Positives = 18/40 (45%), Gaps = 2/40 (5%)
Query: 79 ELSFKKGDIIFVRRQVDKNWYEGEH--NAMIGLFPFNYVE 116
+LSF KG+ + + +W+E G P NYV
Sbjct: 16 DLSFHKGEKFQILNSSEGDWWEARSLTTGETGYIPSNYVA 55
>d1u5sa1 b.34.2.1 (A:1-71) Nck-2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 71
Score = 51.0 bits (122), Expect = 9e-10
Identities = 13/44 (29%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Query: 79 ELSFKKGDIIFVRRQVD--KNWYEGEH-NAMIGLFPFNYVEIIP 119
EL+F+KG+ + V + + W++ ++ +GL P NYV ++
Sbjct: 22 ELNFEKGETMEVIEKPENDPEWWKCKNARGQVGLVPKNYVVVLS 65
Score = 24.8 bits (54), Expect = 3.3
Identities = 5/21 (23%), Positives = 9/21 (42%)
Query: 133 GQARAKFNFVAQTHLELSLVK 153
+ + F + T EL+ K
Sbjct: 7 HVVQTLYPFSSVTEEELNFEK 27
>d1i07a_ b.34.2.1 (A:) EPS8 SH3 domain {Mouse (Mus musculus) [TaxId:
10090]}
Length = 59
Score = 50.3 bits (120), Expect = 1e-09
Identities = 15/61 (24%), Positives = 28/61 (45%), Gaps = 4/61 (6%)
Query: 59 RKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEII 118
+KY + +D +R N +ELS K D++ + + W + G P N ++I+
Sbjct: 1 KKYAKSKYDFVAR----NSSELSVMKDDVLEILDDRRQWWKVRNASGDSGFVPNNILDIM 56
Query: 119 P 119
Sbjct: 57 R 57
Score = 24.9 bits (54), Expect = 2.1
Identities = 9/19 (47%), Positives = 16/19 (84%)
Query: 135 ARAKFNFVAQTHLELSLVK 153
A++K++FVA+ ELS++K
Sbjct: 4 AKSKYDFVARNSSELSVMK 22
>d1gl5a_ b.34.2.1 (A:) tyrosine kinase tec {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 67
Score = 50.6 bits (121), Expect = 2e-09
Identities = 9/41 (21%), Positives = 17/41 (41%), Gaps = 1/41 (2%)
Query: 79 ELSFKKGDIIFVRRQVDKNWYEG-EHNAMIGLFPFNYVEII 118
+L ++G + + D +W+ + G P NYV
Sbjct: 18 DLRLERGQEYIILEKNDLHWWRARDKYGSEGYIPSNYVTGK 58
>d1ng2a1 b.34.2.1 (A:157-214) p47pox (neutrophil cytosolic factor 1)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 58
Score = 50.3 bits (120), Expect = 2e-09
Identities = 9/41 (21%), Positives = 22/41 (53%)
Query: 78 TELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVEII 118
+E++ GD++ V + + W+ + A G P +++E +
Sbjct: 17 SEMALSTGDVVEVVEKSESGWWFCQMKAKRGWIPASFLEPL 57
Score = 23.7 bits (51), Expect = 5.8
Identities = 4/20 (20%), Positives = 9/20 (45%)
Query: 134 QARAKFNFVAQTHLELSLVK 153
RA ++ + E++L
Sbjct: 4 TYRAIADYEKTSGSEMALST 23
>d1wlpb1 b.34.2.1 (B:229-281) p47pox (neutrophil cytosolic factor 1)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 53
Score = 49.9 bits (119), Expect = 2e-09
Identities = 9/38 (23%), Positives = 20/38 (52%)
Query: 79 ELSFKKGDIIFVRRQVDKNWYEGEHNAMIGLFPFNYVE 116
E+S +G+ + V ++ W+ + + G FP Y++
Sbjct: 16 EVSLLEGEAVEVIHKLLDGWWVIRKDDVTGYFPSMYLQ 53
>d1gcqc_ b.34.2.1 (C:) Vav N-terminal SH3 domain {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 69
Score = 50.3 bits (120), Expect = 2e-09
Identities = 15/49 (30%), Positives = 22/49 (44%), Gaps = 5/49 (10%)
Query: 75 DNFTELSFKKGDIIFV-RRQVDKNWYEGE--HNAMIGLFPFNYVEIIPY 120
L GDI+ + + + + NW+EG +G FP N V PY
Sbjct: 22 AFGPFLRLNPGDIVELTKAEAEHNWWEGRNTATNEVGWFPCNRVH--PY 68
>d1wiea_ b.34.2.1 (A:) RIM binding protein 2, RIMBP2 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 96
Score = 49.7 bits (118), Expect = 6e-09
Identities = 12/55 (21%), Positives = 24/55 (43%), Gaps = 2/55 (3%)
Query: 75 DNFTELSFKKGDIIFVRRQVDKNWYEGEHNA--MIGLFPFNYVEIIPYDKIRTAP 127
+ EL G ++V +D++ + GL P N+V+ + ++ R A
Sbjct: 35 NPEAELPLTAGKYLYVYGDMDEDGFYEGELLDGQRGLVPSNFVDFVQDNESRLAS 89
>d2rn8a1 b.34.2.1 (A:176-228) Bruton's tyrosine kinase {Mus musculus
[TaxId: 10090]}
Length = 53
Score = 48.0 bits (114), Expect = 1e-08
Identities = 7/39 (17%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
Query: 79 ELSFKKGDIIFVRRQVDKNWYEGE-HNAMIGLFPFNYVE 116
EL+ + + ++ + +W+ + N G P +Y+
Sbjct: 14 ELALRCDEEYYLLDSSEIHWWRVQDKNGHEGYAPSSYLV 52
>d1zuua1 b.34.2.1 (A:2-57) BZZ1 {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 56
Score = 47.2 bits (112), Expect = 2e-08
Identities = 9/42 (21%), Positives = 17/42 (40%), Gaps = 3/42 (7%)
Query: 79 ELSFKKGDIIFVRRQVDKNWYE---GEHNAMIGLFPFNYVEI 117
E++ GD I + + + + + GL P Y+ I
Sbjct: 15 EITITPGDKISLVARDTGSGWTKINNDTTGETGLVPTTYIRI 56
Score = 26.8 bits (59), Expect = 0.37
Identities = 2/20 (10%), Positives = 10/20 (50%)
Query: 134 QARAKFNFVAQTHLELSLVK 153
+ + + +V + E+++
Sbjct: 1 ENKVLYAYVQKDDDEITITP 20
>d1bb9a_ b.34.2.1 (A:) Amphiphysin 2 {Rat (Rattus norvegicus)
[TaxId: 10116]}
Length = 83
Score = 44.2 bits (104), Expect = 4e-07
Identities = 13/55 (23%), Positives = 19/55 (34%), Gaps = 15/55 (27%)
Query: 79 ELSFKKGDIIFVRRQVDK-----NWYEGEH----------NAMIGLFPFNYVEII 118
EL K GD++ V + W G G+FP N+ E +
Sbjct: 28 ELQLKAGDVVLVIPFQNPEEQDEGWLMGVKESDWNQHKELEKCRGVFPENFTERV 82
Score = 25.3 bits (55), Expect = 2.7
Identities = 5/21 (23%), Positives = 10/21 (47%)
Query: 133 GQARAKFNFVAQTHLELSLVK 153
+ +A+ ++ A EL L
Sbjct: 13 FKVQAQHDYTATDTDELQLKA 33
>d1wfwa_ b.34.2.1 (A:) Kalirin-9a {Mouse (Mus musculus) [TaxId:
10090]}
Length = 74
Score = 43.2 bits (101), Expect = 7e-07
Identities = 7/53 (13%), Positives = 16/53 (30%), Gaps = 6/53 (11%)
Query: 73 HTDNFTELSFKKGDIIFVRRQVDKNWY------EGEHNAMIGLFPFNYVEIIP 119
+ E+ +G+++ V +N A G P + +
Sbjct: 17 YALKENEICVSQGEVVQVLAVNQQNMCLVYQPASDHSPAAEGWVPGSILAPFS 69
>d1phta_ b.34.2.1 (A:) Phosphatidylinositol 3-kinase (p85-alpha
subunit, pi3k), SH3 domain {Human (Homo sapiens) [TaxId:
9606]}
Length = 83
Score = 40.1 bits (93), Expect = 1e-05
Identities = 16/66 (24%), Positives = 22/66 (33%), Gaps = 17/66 (25%)
Query: 75 DNFTELSFKKGDIIFVRRQV---------------DKNWYEG--EHNAMIGLFPFNYVEI 117
+ ++ GDI+ V + + W G E G FP YVE
Sbjct: 15 EREEDIDLHLGDILTVNKGSLVALGFSDGQEARPEEIGWLNGYNETTGERGDFPGTYVEY 74
Query: 118 IPYDKI 123
I KI
Sbjct: 75 IGRKKI 80
Score = 25.5 bits (55), Expect = 1.8
Identities = 6/24 (25%), Positives = 13/24 (54%), Gaps = 1/24 (4%)
Query: 131 SEG-QARAKFNFVAQTHLELSLVK 153
+EG Q RA +++ + ++ L
Sbjct: 1 AEGYQYRALYDYKKEREEDIDLHL 24
>d1vyva1 b.34.2.1 (A:71-215) SH3-like domain of the L-type calcium
channel {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 145
Score = 41.3 bits (96), Expect = 2e-05
Identities = 10/62 (16%), Positives = 23/62 (37%), Gaps = 3/62 (4%)
Query: 78 TELSFKKGDIIFVRRQVDKNWYEGEH---NAMIGLFPFNYVEIIPYDKIRTAPKKLSEGQ 134
+ +SF D + ++ + + +W+ G IG P + K+ G+
Sbjct: 45 SAVSFDAKDFLHIKEKYNNDWWIGRLVKEGCEIGFIPSPLRLENIRIQQEQKRKRFHGGK 104
Query: 135 AR 136
+
Sbjct: 105 SS 106
>d1i1ja_ b.34.2.1 (A:) Melanoma inhibitory activity protein {Human
(Homo sapiens) [TaxId: 9606]}
Length = 106
Score = 40.1 bits (93), Expect = 2e-05
Identities = 12/71 (16%), Positives = 24/71 (33%), Gaps = 11/71 (15%)
Query: 74 TDNFTELSFKKGDIIFVRRQVDKNW-----------YEGEHNAMIGLFPFNYVEIIPYDK 122
+ L+ +G +++V ++ Y G+ A +G FP + V K
Sbjct: 32 APDCRFLTIHRGQVVYVFSKLKGRGRLFWGGSVQGDYYGDLAARLGYFPSSIVREDQTLK 91
Query: 123 IRTAPKKLSEG 133
K +
Sbjct: 92 PGKVDVKTDKW 102
>d1kjwa1 b.34.2.1 (A:430-525) Psd-95 {Rat (Rattus norvegicus)
[TaxId: 10116]}
Length = 96
Score = 38.2 bits (88), Expect = 8e-05
Identities = 11/44 (25%), Positives = 17/44 (38%), Gaps = 6/44 (13%)
Query: 79 ELSFKKGDIIFVRRQVDKNWYEGE------HNAMIGLFPFNYVE 116
LSF+ GD++ V D+ W++ IG P
Sbjct: 22 ALSFRFGDVLHVIDAGDEEWWQARRVHSDSETDDIGFIPSKRRV 65
>d1t0ha_ b.34.2.1 (A:) SH3-like domain of the L-type calcium channel
{Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}
Length = 96
Score = 38.4 bits (89), Expect = 8e-05
Identities = 9/41 (21%), Positives = 17/41 (41%), Gaps = 3/41 (7%)
Query: 78 TELSFKKGDIIFVRRQVDKNWYEGEH---NAMIGLFPFNYV 115
+SF+ D + V+ + + +W+ G IG P
Sbjct: 43 MAISFEAKDFLHVKEKFNNDWWIGRLVKEGCEIGFIPSPVK 83
>d1vyua1 b.34.2.1 (A:39-174) SH3-like domain of the L-type calcium
channel {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 136
Score = 36.6 bits (84), Expect = 6e-04
Identities = 6/41 (14%), Positives = 16/41 (39%), Gaps = 3/41 (7%)
Query: 78 TELSFKKGDIIFVRRQVDKNWYEGEH---NAMIGLFPFNYV 115
+ ++F+ D + ++ + +W+ G I P
Sbjct: 45 SGVNFEAKDFLHIKEKYSNDWWIGRLVKEGGDIAFIPSPQR 85
>d1ug1a_ b.34.2.1 (A:) Hypothetical protein Baa76854.1 (KIAA1010)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 92
Score = 34.8 bits (79), Expect = 0.001
Identities = 7/46 (15%), Positives = 22/46 (47%), Gaps = 4/46 (8%)
Query: 78 TELSFKKGDIIFVRRQVD----KNWYEGEHNAMIGLFPFNYVEIIP 119
++S +GD++ V ++ D +N + ++ G ++++
Sbjct: 32 LDVSLLEGDLVGVIKKKDPMGSQNRWLIDNGVTKGFVYSSFLKPYN 77
>d2diqa1 b.34.9.1 (A:8-104) Tudor and KH domain-containing protein
TDRKH {Human (Homo sapiens) [TaxId: 9606]}
Length = 97
Score = 27.6 bits (61), Expect = 0.42
Identities = 10/61 (16%), Positives = 17/61 (27%), Gaps = 7/61 (11%)
Query: 79 ELSFKKGDIIFVRRQVDKNWY-------EGEHNAMIGLFPFNYVEIIPYDKIRTAPKKLS 131
+L+ GDI+ + +WY N + F P +R
Sbjct: 23 DLTVHVGDIVAAPLPTNGSWYRARVLGTLENGNLDLYFVDFGDNGDCPLKDLRALRSDFL 82
Query: 132 E 132
Sbjct: 83 S 83
>d2d9ta1 b.34.9.1 (A:8-67) Tudor domain-containing protein 3, TDRD3
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 60
Score = 26.3 bits (58), Expect = 0.68
Identities = 9/55 (16%), Positives = 16/55 (29%), Gaps = 8/55 (14%)
Query: 82 FKKGDIIFVRRQVDKNWY--------EGEHNAMIGLFPFNYVEIIPYDKIRTAPK 128
+K GD F D +Y A++ + E + I+
Sbjct: 3 WKPGDECFALYWEDNKFYRAEVEALHSSGMTAVVKFTDYGNYEEVLLSNIKPVQT 57
>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G
protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}
Length = 340
Score = 28.2 bits (61), Expect = 0.73
Identities = 9/62 (14%), Positives = 20/62 (32%), Gaps = 9/62 (14%)
Query: 30 NEIKELISEEELARRQAEAMRRIYQEERRRKYLQELHDISS-----RR----HTDNFTEL 80
+E+ +L E E + Q R+ + + + + RR H +
Sbjct: 2 SELDQLRQEAEQLKNQIRDARKACADATLSQITNNIDPVGRIQMRTRRTLRGHLAKIYAM 61
Query: 81 SF 82
+
Sbjct: 62 HW 63
Score = 26.2 bits (56), Expect = 3.2
Identities = 6/40 (15%), Positives = 15/40 (37%)
Query: 174 NEIKELISEEELARRQAEAMRRIYQEERRRKYLQELHDIS 213
+E+ +L E E + Q R+ + + + +
Sbjct: 2 SELDQLRQEAEQLKNQIRDARKACADATLSQITNNIDPVG 41
>d1z1ba1 d.10.1.4 (A:11-59) lambda integrase N-terminal domain
{Bacteriophage lambda [TaxId: 10710]}
Length = 49
Score = 25.9 bits (57), Expect = 0.75
Identities = 9/44 (20%), Positives = 19/44 (43%), Gaps = 1/44 (2%)
Query: 156 PHKYVDSEVTLQYRRPVRNEIKELISEEELARRQA-EAMRRIYQ 198
P+ Y+ + YR P + L + +A +A +A ++
Sbjct: 4 PNLYIRNNGYYCYRDPRTGKEFGLGRDRRIAITEAIQANIELFS 47
Score = 24.7 bits (54), Expect = 1.7
Identities = 9/44 (20%), Positives = 18/44 (40%), Gaps = 1/44 (2%)
Query: 12 PNSIVDSEVTLQYRRPVRNEIKELISEEELARRQA-EAMRRIYQ 54
PN + + YR P + L + +A +A +A ++
Sbjct: 4 PNLYIRNNGYYCYRDPRTGKEFGLGRDRRIAITEAIQANIELFS 47
>d1ne6a1 b.82.3.2 (A:109-244) Regulatory subunit of Protein kinase A
{Cow (Bos taurus) [TaxId: 9913]}
Length = 136
Score = 27.4 bits (60), Expect = 0.85
Identities = 10/63 (15%), Positives = 21/63 (33%)
Query: 44 RQAEAMRRIYQEERRRKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEH 103
+ + M + + + L D D +SF G+ + + N+Y +
Sbjct: 10 KDYKTMAALAKAIEKNVLFSHLDDNERSDIFDAMFPVSFIAGETVIQQGDEGDNFYVIDQ 69
Query: 104 NAM 106
M
Sbjct: 70 GEM 72
>d1cx4a1 b.82.3.2 (A:130-265) Regulatory subunit of Protein kinase A
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 136
Score = 25.9 bits (56), Expect = 2.4
Identities = 8/63 (12%), Positives = 21/63 (33%)
Query: 44 RQAEAMRRIYQEERRRKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKNWYEGEH 103
+ + R+ + + + L + D E K+G+ + + N+Y +
Sbjct: 6 KTDDQRNRLQEACKDILLFKNLDPEQMSQVLDAMFEKLVKEGEHVIDQGDDGDNFYVIDR 65
Query: 104 NAM 106
Sbjct: 66 GTF 68
>d1f0la3 f.1.2.1 (A:201-380) Diphtheria toxin, middle domain
{Corynebacterium diphtheriae [TaxId: 1717]}
Length = 180
Score = 26.3 bits (57), Expect = 2.7
Identities = 10/45 (22%), Positives = 23/45 (51%)
Query: 25 RRPVRNEIKELISEEELARRQAEAMRRIYQEERRRKYLQELHDIS 69
R + +I+ L + + +E+ + EE+ ++YL+E H +
Sbjct: 10 RDKTKTKIESLKEHGPIKNKMSESPNKTVSEEKAKQYLEEFHQTA 54
Score = 26.3 bits (57), Expect = 2.7
Identities = 10/45 (22%), Positives = 23/45 (51%)
Query: 169 RRPVRNEIKELISEEELARRQAEAMRRIYQEERRRKYLQELHDIS 213
R + +I+ L + + +E+ + EE+ ++YL+E H +
Sbjct: 10 RDKTKTKIESLKEHGPIKNKMSESPNKTVSEEKAKQYLEEFHQTA 54
>d2gp4a1 c.8.2.2 (A:419-608) 6-phosphogluconate dehydratase EDD
{Shewanella oneidensis [TaxId: 70863]}
Length = 190
Score = 26.1 bits (57), Expect = 3.1
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 29 RNEIKELISEEELARRQAE 47
E+ L+S+ ELA R A
Sbjct: 132 TGELSLLVSDTELATRTAT 150
Score = 26.1 bits (57), Expect = 3.1
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 173 RNEIKELISEEELARRQAE 191
E+ L+S+ ELA R A
Sbjct: 132 TGELSLLVSDTELATRTAT 150
>d1wj2a_ g.79.1.1 (A:) WRKY DNA-binding protein 4 {Thale cress
(Arabidopsis thaliana) [TaxId: 3702]}
Length = 71
Score = 24.4 bits (53), Expect = 4.1
Identities = 12/55 (21%), Positives = 23/55 (41%), Gaps = 14/55 (25%)
Query: 59 RKYLQELHDISSRRHTDNFTELSFKKGDIIFVRRQVDKN---------WYEGEHN 104
RKY Q+ + + ++ + + VR+ V++ YEG+HN
Sbjct: 17 RKYGQK--VVKGNPYPRSYYKCTTPGCG---VRKHVERAATDPKAVVTTYEGKHN 66
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.319 0.134 0.372
Gapped
Lambda K H
0.267 0.0440 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 860,849
Number of extensions: 42304
Number of successful extensions: 418
Number of sequences better than 10.0: 1
Number of HSP's gapped: 384
Number of HSP's successfully gapped: 116
Length of query: 225
Length of database: 2,407,596
Length adjustment: 82
Effective length of query: 143
Effective length of database: 1,281,736
Effective search space: 183288248
Effective search space used: 183288248
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 51 (24.2 bits)