BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy15852
(661 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|1209409|emb|CAA90716.1| hnRNP protein [Chironomus tentans]
Length = 297
Score = 214 bits (546), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 101/160 (63%), Positives = 134/160 (83%), Gaps = 6/160 (3%)
Query: 107 GIVHKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + TE EL++HF +YGEI+++ +K+DP TGRSRGFAFIV+K +S++K V+A
Sbjct: 46 GLSWETTEKELRDHFGQYGEIDSINVKTDPTTGRSRGFAFIVYKSADSIDK-----VVAA 100
Query: 166 GNHVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQR 225
G+H+INNKK++ KKAKA++GKIFVGGL PE+ D+EI+A+FAQFGNI+E EMP+DK K+QR
Sbjct: 101 GDHIINNKKVDPKKAKARTGKIFVGGLIPEISDDEIRAYFAQFGNIVEMEMPFDKQKNQR 160
Query: 226 KNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE 265
K FCFITF+ E+VV +LLK PKQ I+ KEVDVKKATPKP+
Sbjct: 161 KAFCFITFDSETVVNELLKTPKQTISGKEVDVKKATPKPD 200
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 39/55 (70%), Positives = 47/55 (85%)
Query: 445 IIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE 499
I+E EMP+DK K+QRK FCFITF+ E+VV +LLK PKQ I+ KEVDVKKATPKP+
Sbjct: 146 IVEMEMPFDKQKNQRKAFCFITFDSETVVNELLKTPKQTISGKEVDVKKATPKPD 200
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/43 (58%), Positives = 38/43 (88%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+EL++HF +YGEI+++ +K+DP TGRSRGFAFIV+K +S++K
Sbjct: 54 KELRDHFGQYGEIDSINVKTDPTTGRSRGFAFIVYKSADSIDK 96
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 44/78 (56%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+FVGGLS E ++E++ HF Q+G I + D + + + F FI ++ + ++
Sbjct: 41 KLFVGGLSWETTEKELRDHFGQYGEIDSINVKTDPTTGRSRGFAFIVYKSADSIDKVVAA 100
Query: 246 PKQKINDKEVDVKKATPK 263
IN+K+VD KKA +
Sbjct: 101 GDHIINNKKVDPKKAKAR 118
>gi|312372973|gb|EFR20814.1| hypothetical protein AND_19410 [Anopheles darlingi]
Length = 293
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 103/155 (66%), Positives = 129/155 (83%), Gaps = 5/155 (3%)
Query: 111 KITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVI 170
+I ++LKEHFS YG+IE++ +K+DPNTGRSRGFAFIV+K+ +S+EK V+A G+HVI
Sbjct: 104 QIYQDLKEHFSAYGDIESINVKTDPNTGRSRGFAFIVYKNADSIEK-----VVAAGDHVI 158
Query: 171 NNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCF 230
NNKK++ KKAKA+ GKIFVGGL+ E+ DEEIK F QFGNI+E EMP+DK K+QRK FCF
Sbjct: 159 NNKKVDPKKAKARHGKIFVGGLTSEISDEEIKIFFGQFGNIVEVEMPFDKQKNQRKGFCF 218
Query: 231 ITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE 265
ITF+ E VV +LLK PKQ I+ KEVDVKKATPKP+
Sbjct: 219 ITFDSEQVVNELLKTPKQTISGKEVDVKKATPKPD 253
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/55 (70%), Positives = 46/55 (83%)
Query: 445 IIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE 499
I+E EMP+DK K+QRK FCFITF+ E VV +LLK PKQ I+ KEVDVKKATPKP+
Sbjct: 199 IVEVEMPFDKQKNQRKGFCFITFDSEQVVNELLKTPKQTISGKEVDVKKATPKPD 253
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/47 (63%), Positives = 42/47 (89%)
Query: 605 KITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
+I ++LKEHFS YG+IE++ +K+DPNTGRSRGFAFIV+K+ +S+EK
Sbjct: 104 QIYQDLKEHFSAYGDIESINVKTDPNTGRSRGFAFIVYKNADSIEKV 150
>gi|24646609|ref|NP_731826.1| squid, isoform A [Drosophila melanogaster]
gi|11038|emb|CAA44503.1| hrp40.1 [Drosophila melanogaster]
gi|21428420|gb|AAM49870.1| LD09691p [Drosophila melanogaster]
gi|23171185|gb|AAF54964.2| squid, isoform A [Drosophila melanogaster]
gi|220943526|gb|ACL84306.1| sqd-PA [synthetic construct]
gi|220953540|gb|ACL89313.1| sqd-PA [synthetic construct]
Length = 321
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 104/160 (65%), Positives = 128/160 (80%), Gaps = 6/160 (3%)
Query: 107 GIVHKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + TE EL++HF KYGEIE++ +K+DP TGRSRGFAFIVF +TE+++K S D
Sbjct: 62 GLSWETTEKELRDHFGKYGEIESINVKTDPQTGRSRGFAFIVFTNTEAIDKVSAAD---- 117
Query: 166 GNHVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQR 225
H+IN+KK++ KKAKA+ GKIFVGGL+ E+ DEEIK +F QFGNI+E EMP+DK KSQR
Sbjct: 118 -EHIINSKKVDPKKAKARHGKIFVGGLTTEISDEEIKTYFGQFGNIVEVEMPFDKQKSQR 176
Query: 226 KNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE 265
K FCFITF+ E VV DLLK PKQKI KEVDVK+ATPKPE
Sbjct: 177 KGFCFITFDSEQVVTDLLKTPKQKIAGKEVDVKRATPKPE 216
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 42/55 (76%), Positives = 46/55 (83%)
Query: 445 IIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE 499
I+E EMP+DK KSQRK FCFITF+ E VV DLLK PKQKI KEVDVK+ATPKPE
Sbjct: 162 IVEVEMPFDKQKSQRKGFCFITFDSEQVVTDLLKTPKQKIAGKEVDVKRATPKPE 216
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 42/51 (82%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYF 658
+EL++HF KYGEIE++ +K+DP TGRSRGFAFIVF +TE+++K S D +
Sbjct: 70 KELRDHFGKYGEIESINVKTDPQTGRSRGFAFIVFTNTEAIDKVSAADEHI 120
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 42/78 (53%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+FVGGLS E ++E++ HF ++G I + D + + F FI F + + +
Sbjct: 57 KLFVGGLSWETTEKELRDHFGKYGEIESINVKTDPQTGRSRGFAFIVFTNTEAIDKVSAA 116
Query: 246 PKQKINDKEVDVKKATPK 263
+ IN K+VD KKA +
Sbjct: 117 DEHIINSKKVDPKKAKAR 134
>gi|390178414|ref|XP_001359012.3| GA14206, isoform C [Drosophila pseudoobscura pseudoobscura]
gi|388859439|gb|EAL28155.3| GA14206, isoform C [Drosophila pseudoobscura pseudoobscura]
Length = 310
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 103/160 (64%), Positives = 131/160 (81%), Gaps = 6/160 (3%)
Query: 107 GIVHKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + TE EL++HF K+GEIE++ +K+DP TGRSRGFAFIVF +TE+++K S +
Sbjct: 61 GLSWETTEKELRDHFGKFGEIESINVKTDPQTGRSRGFAFIVFTNTEAIDKVS-----SA 115
Query: 166 GNHVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQR 225
G H+IN+KK++ KKAKA+ GKIFVGGL+ E+ DEEIK +F+QFGNI+E EMP+DK KSQR
Sbjct: 116 GEHIINSKKVDPKKAKARHGKIFVGGLTTEISDEEIKTYFSQFGNIVEVEMPFDKQKSQR 175
Query: 226 KNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE 265
K FCFITF+ E VV DLLK PKQKI+ KEVDVK+ATPKPE
Sbjct: 176 KGFCFITFDSEQVVTDLLKTPKQKISGKEVDVKRATPKPE 215
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 42/55 (76%), Positives = 47/55 (85%)
Query: 445 IIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE 499
I+E EMP+DK KSQRK FCFITF+ E VV DLLK PKQKI+ KEVDVK+ATPKPE
Sbjct: 161 IVEVEMPFDKQKSQRKGFCFITFDSEQVVTDLLKTPKQKISGKEVDVKRATPKPE 215
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 40/45 (88%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKAS 652
+EL++HF K+GEIE++ +K+DP TGRSRGFAFIVF +TE+++K S
Sbjct: 69 KELRDHFGKFGEIESINVKTDPQTGRSRGFAFIVFTNTEAIDKVS 113
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 42/78 (53%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+FVGGLS E ++E++ HF +FG I + D + + F FI F + + +
Sbjct: 56 KLFVGGLSWETTEKELRDHFGKFGEIESINVKTDPQTGRSRGFAFIVFTNTEAIDKVSSA 115
Query: 246 PKQKINDKEVDVKKATPK 263
+ IN K+VD KKA +
Sbjct: 116 GEHIINSKKVDPKKAKAR 133
>gi|390178412|ref|XP_003736644.1| GA14206, isoform B [Drosophila pseudoobscura pseudoobscura]
gi|388859438|gb|EIM52717.1| GA14206, isoform B [Drosophila pseudoobscura pseudoobscura]
Length = 319
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 103/160 (64%), Positives = 131/160 (81%), Gaps = 6/160 (3%)
Query: 107 GIVHKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + TE EL++HF K+GEIE++ +K+DP TGRSRGFAFIVF +TE+++K S +
Sbjct: 61 GLSWETTEKELRDHFGKFGEIESINVKTDPQTGRSRGFAFIVFTNTEAIDKVS-----SA 115
Query: 166 GNHVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQR 225
G H+IN+KK++ KKAKA+ GKIFVGGL+ E+ DEEIK +F+QFGNI+E EMP+DK KSQR
Sbjct: 116 GEHIINSKKVDPKKAKARHGKIFVGGLTTEISDEEIKTYFSQFGNIVEVEMPFDKQKSQR 175
Query: 226 KNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE 265
K FCFITF+ E VV DLLK PKQKI+ KEVDVK+ATPKPE
Sbjct: 176 KGFCFITFDSEQVVTDLLKTPKQKISGKEVDVKRATPKPE 215
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 42/55 (76%), Positives = 47/55 (85%)
Query: 445 IIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE 499
I+E EMP+DK KSQRK FCFITF+ E VV DLLK PKQKI+ KEVDVK+ATPKPE
Sbjct: 161 IVEVEMPFDKQKSQRKGFCFITFDSEQVVTDLLKTPKQKISGKEVDVKRATPKPE 215
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 40/45 (88%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKAS 652
+EL++HF K+GEIE++ +K+DP TGRSRGFAFIVF +TE+++K S
Sbjct: 69 KELRDHFGKFGEIESINVKTDPQTGRSRGFAFIVFTNTEAIDKVS 113
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 42/78 (53%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+FVGGLS E ++E++ HF +FG I + D + + F FI F + + +
Sbjct: 56 KLFVGGLSWETTEKELRDHFGKFGEIESINVKTDPQTGRSRGFAFIVFTNTEAIDKVSSA 115
Query: 246 PKQKINDKEVDVKKATPK 263
+ IN K+VD KKA +
Sbjct: 116 GEHIINSKKVDPKKAKAR 133
>gi|24646605|ref|NP_652209.1| squid, isoform C [Drosophila melanogaster]
gi|386765705|ref|NP_001247088.1| squid, isoform E [Drosophila melanogaster]
gi|23171183|gb|AAN13570.1| squid, isoform C [Drosophila melanogaster]
gi|73853364|gb|AAZ86753.1| LD29474p [Drosophila melanogaster]
gi|220951946|gb|ACL88516.1| sqd-PC [synthetic construct]
gi|383292688|gb|AFH06406.1| squid, isoform E [Drosophila melanogaster]
Length = 308
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 104/160 (65%), Positives = 128/160 (80%), Gaps = 6/160 (3%)
Query: 107 GIVHKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + TE EL++HF KYGEIE++ +K+DP TGRSRGFAFIVF +TE+++K S D
Sbjct: 62 GLSWETTEKELRDHFGKYGEIESINVKTDPQTGRSRGFAFIVFTNTEAIDKVSAAD---- 117
Query: 166 GNHVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQR 225
H+IN+KK++ KKAKA+ GKIFVGGL+ E+ DEEIK +F QFGNI+E EMP+DK KSQR
Sbjct: 118 -EHIINSKKVDPKKAKARHGKIFVGGLTTEISDEEIKTYFGQFGNIVEVEMPFDKQKSQR 176
Query: 226 KNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE 265
K FCFITF+ E VV DLLK PKQKI KEVDVK+ATPKPE
Sbjct: 177 KGFCFITFDSEQVVTDLLKTPKQKIAGKEVDVKRATPKPE 216
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/55 (76%), Positives = 46/55 (83%)
Query: 445 IIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE 499
I+E EMP+DK KSQRK FCFITF+ E VV DLLK PKQKI KEVDVK+ATPKPE
Sbjct: 162 IVEVEMPFDKQKSQRKGFCFITFDSEQVVTDLLKTPKQKIAGKEVDVKRATPKPE 216
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 42/51 (82%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYF 658
+EL++HF KYGEIE++ +K+DP TGRSRGFAFIVF +TE+++K S D +
Sbjct: 70 KELRDHFGKYGEIESINVKTDPQTGRSRGFAFIVFTNTEAIDKVSAADEHI 120
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 42/78 (53%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+FVGGLS E ++E++ HF ++G I + D + + F FI F + + +
Sbjct: 57 KLFVGGLSWETTEKELRDHFGKYGEIESINVKTDPQTGRSRGFAFIVFTNTEAIDKVSAA 116
Query: 246 PKQKINDKEVDVKKATPK 263
+ IN K+VD KKA +
Sbjct: 117 DEHIINSKKVDPKKAKAR 134
>gi|11040|emb|CAA44504.1| hrp40.2 [Drosophila melanogaster]
Length = 345
Score = 213 bits (542), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 104/160 (65%), Positives = 128/160 (80%), Gaps = 6/160 (3%)
Query: 107 GIVHKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + TE EL++HF KYGEIE++ +K+DP TGRSRGFAFIVF +TE+++K S D
Sbjct: 62 GLSWETTEKELRDHFGKYGEIESINVKTDPQTGRSRGFAFIVFTNTEAIDKVSAAD---- 117
Query: 166 GNHVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQR 225
H+IN+KK++ KKAKA+ GKIFVGGL+ E+ DEEIK +F QFGNI+E EMP+DK KSQR
Sbjct: 118 -EHIINSKKVDPKKAKARHGKIFVGGLTTEISDEEIKTYFGQFGNIVEVEMPFDKQKSQR 176
Query: 226 KNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE 265
K FCFITF+ E VV DLLK PKQKI KEVDVK+ATPKPE
Sbjct: 177 KGFCFITFDSEQVVTDLLKTPKQKIAGKEVDVKRATPKPE 216
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/55 (76%), Positives = 46/55 (83%)
Query: 445 IIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE 499
I+E EMP+DK KSQRK FCFITF+ E VV DLLK PKQKI KEVDVK+ATPKPE
Sbjct: 162 IVEVEMPFDKQKSQRKGFCFITFDSEQVVTDLLKTPKQKIAGKEVDVKRATPKPE 216
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 42/51 (82%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYF 658
+EL++HF KYGEIE++ +K+DP TGRSRGFAFIVF +TE+++K S D +
Sbjct: 70 KELRDHFGKYGEIESINVKTDPQTGRSRGFAFIVFTNTEAIDKVSAADEHI 120
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 42/78 (53%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+FVGGLS E ++E++ HF ++G I + D + + F FI F + + +
Sbjct: 57 KLFVGGLSWETTEKELRDHFGKYGEIESINVKTDPQTGRSRGFAFIVFTNTEAIDKVSAA 116
Query: 246 PKQKINDKEVDVKKATPK 263
+ IN K+VD KKA +
Sbjct: 117 DEHIINSKKVDPKKAKAR 134
>gi|24646607|ref|NP_731825.1| squid, isoform B [Drosophila melanogaster]
gi|55584092|sp|Q08473.3|SQD_DROME RecName: Full=RNA-binding protein squid; AltName:
Full=Heterogeneous nuclear ribonucleoprotein 40;
Short=HNRNP 40
gi|23171184|gb|AAF54963.2| squid, isoform B [Drosophila melanogaster]
Length = 344
Score = 213 bits (542), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 104/160 (65%), Positives = 128/160 (80%), Gaps = 6/160 (3%)
Query: 107 GIVHKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + TE EL++HF KYGEIE++ +K+DP TGRSRGFAFIVF +TE+++K S D
Sbjct: 62 GLSWETTEKELRDHFGKYGEIESINVKTDPQTGRSRGFAFIVFTNTEAIDKVSAAD---- 117
Query: 166 GNHVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQR 225
H+IN+KK++ KKAKA+ GKIFVGGL+ E+ DEEIK +F QFGNI+E EMP+DK KSQR
Sbjct: 118 -EHIINSKKVDPKKAKARHGKIFVGGLTTEISDEEIKTYFGQFGNIVEVEMPFDKQKSQR 176
Query: 226 KNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE 265
K FCFITF+ E VV DLLK PKQKI KEVDVK+ATPKPE
Sbjct: 177 KGFCFITFDSEQVVTDLLKTPKQKIAGKEVDVKRATPKPE 216
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/55 (76%), Positives = 46/55 (83%)
Query: 445 IIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE 499
I+E EMP+DK KSQRK FCFITF+ E VV DLLK PKQKI KEVDVK+ATPKPE
Sbjct: 162 IVEVEMPFDKQKSQRKGFCFITFDSEQVVTDLLKTPKQKIAGKEVDVKRATPKPE 216
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 42/51 (82%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYF 658
+EL++HF KYGEIE++ +K+DP TGRSRGFAFIVF +TE+++K S D +
Sbjct: 70 KELRDHFGKYGEIESINVKTDPQTGRSRGFAFIVFTNTEAIDKVSAADEHI 120
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 42/78 (53%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+FVGGLS E ++E++ HF ++G I + D + + F FI F + + +
Sbjct: 57 KLFVGGLSWETTEKELRDHFGKYGEIESINVKTDPQTGRSRGFAFIVFTNTEAIDKVSAA 116
Query: 246 PKQKINDKEVDVKKATPK 263
+ IN K+VD KKA +
Sbjct: 117 DEHIINSKKVDPKKAKAR 134
>gi|194901408|ref|XP_001980244.1| GG17035 [Drosophila erecta]
gi|190651947|gb|EDV49202.1| GG17035 [Drosophila erecta]
Length = 345
Score = 213 bits (542), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 104/160 (65%), Positives = 128/160 (80%), Gaps = 6/160 (3%)
Query: 107 GIVHKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + TE EL++HF KYGEIE++ +K+DP TGRSRGFAFIVF +TE+++K S D
Sbjct: 62 GLSWETTEKELRDHFGKYGEIESINVKTDPQTGRSRGFAFIVFTNTEAIDKVSAAD---- 117
Query: 166 GNHVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQR 225
H+IN+KK++ KKAKA+ GKIFVGGL+ E+ DEEIK +F QFGNI+E EMP+DK KSQR
Sbjct: 118 -EHIINSKKVDPKKAKARHGKIFVGGLTTEISDEEIKTYFGQFGNIVEVEMPFDKQKSQR 176
Query: 226 KNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE 265
K FCFITF+ E VV DLLK PKQKI KEVDVK+ATPKPE
Sbjct: 177 KGFCFITFDSEQVVTDLLKTPKQKIAGKEVDVKRATPKPE 216
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/55 (76%), Positives = 46/55 (83%)
Query: 445 IIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE 499
I+E EMP+DK KSQRK FCFITF+ E VV DLLK PKQKI KEVDVK+ATPKPE
Sbjct: 162 IVEVEMPFDKQKSQRKGFCFITFDSEQVVTDLLKTPKQKIAGKEVDVKRATPKPE 216
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 42/51 (82%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYF 658
+EL++HF KYGEIE++ +K+DP TGRSRGFAFIVF +TE+++K S D +
Sbjct: 70 KELRDHFGKYGEIESINVKTDPQTGRSRGFAFIVFTNTEAIDKVSAADEHI 120
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 42/78 (53%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+FVGGLS E ++E++ HF ++G I + D + + F FI F + + +
Sbjct: 57 KLFVGGLSWETTEKELRDHFGKYGEIESINVKTDPQTGRSRGFAFIVFTNTEAIDKVSAA 116
Query: 246 PKQKINDKEVDVKKATPK 263
+ IN K+VD KKA +
Sbjct: 117 DEHIINSKKVDPKKAKAR 134
>gi|157110306|ref|XP_001651044.1| heterogeneous nuclear ribonucleoprotein [Aedes aegypti]
gi|108878768|gb|EAT42993.1| AAEL005515-PB [Aedes aegypti]
Length = 292
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 102/152 (67%), Positives = 126/152 (82%), Gaps = 5/152 (3%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+ELKEHF +YGEIE++ +K+DPNTGRSRGFAFIV+K +S++K V+A G+HVINNK
Sbjct: 50 KELKEHFGQYGEIESINVKTDPNTGRSRGFAFIVYKSADSIDK-----VVAAGDHVINNK 104
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
K++ KKAKA+ GKIFVGGL+ E+ DEEIK F QFGNI+E EMP+DK K+QRK FCFITF
Sbjct: 105 KVDPKKAKARHGKIFVGGLTTEISDEEIKTFFGQFGNIVEVEMPFDKQKNQRKGFCFITF 164
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKATPKPE 265
+ E VV +LLK PKQ I+ KEVDVKKATPKP+
Sbjct: 165 DSEQVVNELLKTPKQTISGKEVDVKKATPKPD 196
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/55 (70%), Positives = 46/55 (83%)
Query: 445 IIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE 499
I+E EMP+DK K+QRK FCFITF+ E VV +LLK PKQ I+ KEVDVKKATPKP+
Sbjct: 142 IVEVEMPFDKQKNQRKGFCFITFDSEQVVNELLKTPKQTISGKEVDVKKATPKPD 196
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/44 (65%), Positives = 39/44 (88%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
+ELKEHF +YGEIE++ +K+DPNTGRSRGFAFIV+K +S++K
Sbjct: 50 KELKEHFGQYGEIESINVKTDPNTGRSRGFAFIVYKSADSIDKV 93
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 47/88 (53%)
Query: 176 EAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEH 235
E+ + K+FVGGLS E D+E+K HF Q+G I + D + + + F FI ++
Sbjct: 27 ESSNVRDDDRKLFVGGLSWETSDKELKEHFGQYGEIESINVKTDPNTGRSRGFAFIVYKS 86
Query: 236 ESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ ++ IN+K+VD KKA +
Sbjct: 87 ADSIDKVVAAGDHVINNKKVDPKKAKAR 114
Score = 43.1 bits (100), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 84/192 (43%), Gaps = 23/192 (11%)
Query: 4 ESQDVEMTTTENGQENGGAPVSVKDDDRKLFCPLSSYLELDYLQLWQYFDWVSSSFSENC 63
ESQD G +NG +V+DDDRKLF S+ E +L ++F S N
Sbjct: 14 ESQD-----QNGGDQNGAESSNVRDDDRKLFVGGLSW-ETSDKELKEHFGQYGEIESINV 67
Query: 64 LLEDSIGKP--LTVSCSHHYYLFDQILRTHFFYI---------MEAKNKMVSHPGIVHKI 112
+ + G+ D+++ I +A++ + G+ +I
Sbjct: 68 KTDPNTGRSRGFAFIVYKSADSIDKVVAAGDHVINNKKVDPKKAKARHGKIFVGGLTTEI 127
Query: 113 T-EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVIN 171
+ EE+K F ++G I V + D + +GF FI F D+E + V +++ I+
Sbjct: 128 SDEEIKTFFGQFGNIVEVEMPFDKQKNQRKGFCFITF-DSEQV----VNELLKTPKQTIS 182
Query: 172 NKKIEAKKAKAK 183
K+++ KKA K
Sbjct: 183 GKEVDVKKATPK 194
>gi|157110304|ref|XP_001651043.1| heterogeneous nuclear ribonucleoprotein [Aedes aegypti]
gi|108878767|gb|EAT42992.1| AAEL005515-PE [Aedes aegypti]
Length = 285
Score = 212 bits (540), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 102/152 (67%), Positives = 126/152 (82%), Gaps = 5/152 (3%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+ELKEHF +YGEIE++ +K+DPNTGRSRGFAFIV+K +S++K V+A G+HVINNK
Sbjct: 50 KELKEHFGQYGEIESINVKTDPNTGRSRGFAFIVYKSADSIDK-----VVAAGDHVINNK 104
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
K++ KKAKA+ GKIFVGGL+ E+ DEEIK F QFGNI+E EMP+DK K+QRK FCFITF
Sbjct: 105 KVDPKKAKARHGKIFVGGLTTEISDEEIKTFFGQFGNIVEVEMPFDKQKNQRKGFCFITF 164
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKATPKPE 265
+ E VV +LLK PKQ I+ KEVDVKKATPKP+
Sbjct: 165 DSEQVVNELLKTPKQTISGKEVDVKKATPKPD 196
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 39/55 (70%), Positives = 46/55 (83%)
Query: 445 IIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE 499
I+E EMP+DK K+QRK FCFITF+ E VV +LLK PKQ I+ KEVDVKKATPKP+
Sbjct: 142 IVEVEMPFDKQKNQRKGFCFITFDSEQVVNELLKTPKQTISGKEVDVKKATPKPD 196
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 29/43 (67%), Positives = 39/43 (90%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+ELKEHF +YGEIE++ +K+DPNTGRSRGFAFIV+K +S++K
Sbjct: 50 KELKEHFGQYGEIESINVKTDPNTGRSRGFAFIVYKSADSIDK 92
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 47/88 (53%)
Query: 176 EAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEH 235
E+ + K+FVGGLS E D+E+K HF Q+G I + D + + + F FI ++
Sbjct: 27 ESSNVRDDDRKLFVGGLSWETSDKELKEHFGQYGEIESINVKTDPNTGRSRGFAFIVYKS 86
Query: 236 ESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ ++ IN+K+VD KKA +
Sbjct: 87 ADSIDKVVAAGDHVINNKKVDPKKAKAR 114
Score = 42.7 bits (99), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 84/192 (43%), Gaps = 23/192 (11%)
Query: 4 ESQDVEMTTTENGQENGGAPVSVKDDDRKLFCPLSSYLELDYLQLWQYFDWVSSSFSENC 63
ESQD G +NG +V+DDDRKLF S+ D +L ++F S N
Sbjct: 14 ESQD-----QNGGDQNGAESSNVRDDDRKLFVGGLSWETSD-KELKEHFGQYGEIESINV 67
Query: 64 LLEDSIGKP--LTVSCSHHYYLFDQILRTHFFYI---------MEAKNKMVSHPGIVHKI 112
+ + G+ D+++ I +A++ + G+ +I
Sbjct: 68 KTDPNTGRSRGFAFIVYKSADSIDKVVAAGDHVINNKKVDPKKAKARHGKIFVGGLTTEI 127
Query: 113 T-EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVIN 171
+ EE+K F ++G I V + D + +GF FI F D+E + V +++ I+
Sbjct: 128 SDEEIKTFFGQFGNIVEVEMPFDKQKNQRKGFCFITF-DSEQV----VNELLKTPKQTIS 182
Query: 172 NKKIEAKKAKAK 183
K+++ KKA K
Sbjct: 183 GKEVDVKKATPK 194
>gi|385454|gb|AAB26988.1| SqdA [Drosophila melanogaster]
Length = 321
Score = 212 bits (540), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 104/160 (65%), Positives = 127/160 (79%), Gaps = 6/160 (3%)
Query: 107 GIVHKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + TE EL++HF KYGEIE++ +K+DP TGRSRGFAFIVF +TE+++K S D
Sbjct: 62 GLSWETTEKELRDHFGKYGEIESINVKTDPQTGRSRGFAFIVFTNTEAIDKVSAAD---- 117
Query: 166 GNHVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQR 225
H+IN+KK++ KKAKA+ GKIFVGGL+ E+ DEEIK +F QFGNI+E EMP DK KSQR
Sbjct: 118 -EHIINSKKVDPKKAKARHGKIFVGGLTTEISDEEIKTYFGQFGNIVEVEMPLDKQKSQR 176
Query: 226 KNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE 265
K FCFITF+ E VV DLLK PKQKI KEVDVK+ATPKPE
Sbjct: 177 KGFCFITFDSEQVVTDLLKTPKQKIAGKEVDVKRATPKPE 216
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/55 (76%), Positives = 45/55 (81%)
Query: 445 IIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE 499
I+E EMP DK KSQRK FCFITF+ E VV DLLK PKQKI KEVDVK+ATPKPE
Sbjct: 162 IVEVEMPLDKQKSQRKGFCFITFDSEQVVTDLLKTPKQKIAGKEVDVKRATPKPE 216
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 42/51 (82%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYF 658
+EL++HF KYGEIE++ +K+DP TGRSRGFAFIVF +TE+++K S D +
Sbjct: 70 KELRDHFGKYGEIESINVKTDPQTGRSRGFAFIVFTNTEAIDKVSAADEHI 120
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 42/78 (53%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+FVGGLS E ++E++ HF ++G I + D + + F FI F + + +
Sbjct: 57 KLFVGGLSWETTEKELRDHFGKYGEIESINVKTDPQTGRSRGFAFIVFTNTEAIDKVSAA 116
Query: 246 PKQKINDKEVDVKKATPK 263
+ IN K+VD KKA +
Sbjct: 117 DEHIINSKKVDPKKAKAR 134
>gi|157110296|ref|XP_001651039.1| heterogeneous nuclear ribonucleoprotein [Aedes aegypti]
gi|157110300|ref|XP_001651041.1| heterogeneous nuclear ribonucleoprotein [Aedes aegypti]
gi|108878763|gb|EAT42988.1| AAEL005515-PG [Aedes aegypti]
gi|108878765|gb|EAT42990.1| AAEL005515-PC [Aedes aegypti]
Length = 300
Score = 212 bits (540), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 102/152 (67%), Positives = 126/152 (82%), Gaps = 5/152 (3%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+ELKEHF +YGEIE++ +K+DPNTGRSRGFAFIV+K +S++K V+A G+HVINNK
Sbjct: 50 KELKEHFGQYGEIESINVKTDPNTGRSRGFAFIVYKSADSIDK-----VVAAGDHVINNK 104
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
K++ KKAKA+ GKIFVGGL+ E+ DEEIK F QFGNI+E EMP+DK K+QRK FCFITF
Sbjct: 105 KVDPKKAKARHGKIFVGGLTTEISDEEIKTFFGQFGNIVEVEMPFDKQKNQRKGFCFITF 164
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKATPKPE 265
+ E VV +LLK PKQ I+ KEVDVKKATPKP+
Sbjct: 165 DSEQVVNELLKTPKQTISGKEVDVKKATPKPD 196
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/55 (70%), Positives = 46/55 (83%)
Query: 445 IIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE 499
I+E EMP+DK K+QRK FCFITF+ E VV +LLK PKQ I+ KEVDVKKATPKP+
Sbjct: 142 IVEVEMPFDKQKNQRKGFCFITFDSEQVVNELLKTPKQTISGKEVDVKKATPKPD 196
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 29/43 (67%), Positives = 39/43 (90%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+ELKEHF +YGEIE++ +K+DPNTGRSRGFAFIV+K +S++K
Sbjct: 50 KELKEHFGQYGEIESINVKTDPNTGRSRGFAFIVYKSADSIDK 92
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 47/88 (53%)
Query: 176 EAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEH 235
E+ + K+FVGGLS E D+E+K HF Q+G I + D + + + F FI ++
Sbjct: 27 ESSNVRDDDRKLFVGGLSWETSDKELKEHFGQYGEIESINVKTDPNTGRSRGFAFIVYKS 86
Query: 236 ESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ ++ IN+K+VD KKA +
Sbjct: 87 ADSIDKVVAAGDHVINNKKVDPKKAKAR 114
Score = 43.9 bits (102), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 84/192 (43%), Gaps = 23/192 (11%)
Query: 4 ESQDVEMTTTENGQENGGAPVSVKDDDRKLFCPLSSYLELDYLQLWQYFDWVSSSFSENC 63
ESQD G +NG +V+DDDRKLF S+ E +L ++F S N
Sbjct: 14 ESQD-----QNGGDQNGAESSNVRDDDRKLFVGGLSW-ETSDKELKEHFGQYGEIESINV 67
Query: 64 LLEDSIGKP--LTVSCSHHYYLFDQILRTHFFYI---------MEAKNKMVSHPGIVHKI 112
+ + G+ D+++ I +A++ + G+ +I
Sbjct: 68 KTDPNTGRSRGFAFIVYKSADSIDKVVAAGDHVINNKKVDPKKAKARHGKIFVGGLTTEI 127
Query: 113 T-EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVIN 171
+ EE+K F ++G I V + D + +GF FI F D+E + V +++ I+
Sbjct: 128 SDEEIKTFFGQFGNIVEVEMPFDKQKNQRKGFCFITF-DSEQV----VNELLKTPKQTIS 182
Query: 172 NKKIEAKKAKAK 183
K+++ KKA K
Sbjct: 183 GKEVDVKKATPK 194
>gi|157110294|ref|XP_001651038.1| heterogeneous nuclear ribonucleoprotein [Aedes aegypti]
gi|108878762|gb|EAT42987.1| AAEL005515-PF [Aedes aegypti]
Length = 325
Score = 212 bits (540), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 102/152 (67%), Positives = 126/152 (82%), Gaps = 5/152 (3%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+ELKEHF +YGEIE++ +K+DPNTGRSRGFAFIV+K +S++K V+A G+HVINNK
Sbjct: 50 KELKEHFGQYGEIESINVKTDPNTGRSRGFAFIVYKSADSIDK-----VVAAGDHVINNK 104
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
K++ KKAKA+ GKIFVGGL+ E+ DEEIK F QFGNI+E EMP+DK K+QRK FCFITF
Sbjct: 105 KVDPKKAKARHGKIFVGGLTTEISDEEIKTFFGQFGNIVEVEMPFDKQKNQRKGFCFITF 164
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKATPKPE 265
+ E VV +LLK PKQ I+ KEVDVKKATPKP+
Sbjct: 165 DSEQVVNELLKTPKQTISGKEVDVKKATPKPD 196
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/55 (70%), Positives = 46/55 (83%)
Query: 445 IIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE 499
I+E EMP+DK K+QRK FCFITF+ E VV +LLK PKQ I+ KEVDVKKATPKP+
Sbjct: 142 IVEVEMPFDKQKNQRKGFCFITFDSEQVVNELLKTPKQTISGKEVDVKKATPKPD 196
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 29/43 (67%), Positives = 39/43 (90%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+ELKEHF +YGEIE++ +K+DPNTGRSRGFAFIV+K +S++K
Sbjct: 50 KELKEHFGQYGEIESINVKTDPNTGRSRGFAFIVYKSADSIDK 92
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 47/88 (53%)
Query: 176 EAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEH 235
E+ + K+FVGGLS E D+E+K HF Q+G I + D + + + F FI ++
Sbjct: 27 ESSNVRDDDRKLFVGGLSWETSDKELKEHFGQYGEIESINVKTDPNTGRSRGFAFIVYKS 86
Query: 236 ESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ ++ IN+K+VD KKA +
Sbjct: 87 ADSIDKVVAAGDHVINNKKVDPKKAKAR 114
Score = 44.3 bits (103), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 84/192 (43%), Gaps = 23/192 (11%)
Query: 4 ESQDVEMTTTENGQENGGAPVSVKDDDRKLFCPLSSYLELDYLQLWQYFDWVSSSFSENC 63
ESQD G +NG +V+DDDRKLF S+ E +L ++F S N
Sbjct: 14 ESQD-----QNGGDQNGAESSNVRDDDRKLFVGGLSW-ETSDKELKEHFGQYGEIESINV 67
Query: 64 LLEDSIGKP--LTVSCSHHYYLFDQILRTHFFYI---------MEAKNKMVSHPGIVHKI 112
+ + G+ D+++ I +A++ + G+ +I
Sbjct: 68 KTDPNTGRSRGFAFIVYKSADSIDKVVAAGDHVINNKKVDPKKAKARHGKIFVGGLTTEI 127
Query: 113 T-EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVIN 171
+ EE+K F ++G I V + D + +GF FI F D+E + V +++ I+
Sbjct: 128 SDEEIKTFFGQFGNIVEVEMPFDKQKNQRKGFCFITF-DSEQV----VNELLKTPKQTIS 182
Query: 172 NKKIEAKKAKAK 183
K+++ KKA K
Sbjct: 183 GKEVDVKKATPK 194
>gi|385455|gb|AAB26989.1| SqdB [Drosophila melanogaster]
Length = 308
Score = 212 bits (539), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 104/160 (65%), Positives = 127/160 (79%), Gaps = 6/160 (3%)
Query: 107 GIVHKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + TE EL++HF KYGEIE++ +K+DP TGRSRGFAFIVF +TE+++K S D
Sbjct: 62 GLSWETTEKELRDHFGKYGEIESINVKTDPQTGRSRGFAFIVFTNTEAIDKVSAAD---- 117
Query: 166 GNHVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQR 225
H+IN+KK++ KKAKA+ GKIFVGGL+ E+ DEEIK +F QFGNI+E EMP DK KSQR
Sbjct: 118 -EHIINSKKVDPKKAKARHGKIFVGGLTTEISDEEIKTYFGQFGNIVEVEMPLDKQKSQR 176
Query: 226 KNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE 265
K FCFITF+ E VV DLLK PKQKI KEVDVK+ATPKPE
Sbjct: 177 KGFCFITFDSEQVVTDLLKTPKQKIAGKEVDVKRATPKPE 216
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/55 (76%), Positives = 45/55 (81%)
Query: 445 IIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE 499
I+E EMP DK KSQRK FCFITF+ E VV DLLK PKQKI KEVDVK+ATPKPE
Sbjct: 162 IVEVEMPLDKQKSQRKGFCFITFDSEQVVTDLLKTPKQKIAGKEVDVKRATPKPE 216
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 42/51 (82%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYF 658
+EL++HF KYGEIE++ +K+DP TGRSRGFAFIVF +TE+++K S D +
Sbjct: 70 KELRDHFGKYGEIESINVKTDPQTGRSRGFAFIVFTNTEAIDKVSAADEHI 120
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 42/78 (53%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+FVGGLS E ++E++ HF ++G I + D + + F FI F + + +
Sbjct: 57 KLFVGGLSWETTEKELRDHFGKYGEIESINVKTDPQTGRSRGFAFIVFTNTEAIDKVSAA 116
Query: 246 PKQKINDKEVDVKKATPK 263
+ IN K+VD KKA +
Sbjct: 117 DEHIINSKKVDPKKAKAR 134
>gi|195500849|ref|XP_002097550.1| GE24428 [Drosophila yakuba]
gi|194183651|gb|EDW97262.1| GE24428 [Drosophila yakuba]
Length = 345
Score = 212 bits (539), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 104/160 (65%), Positives = 128/160 (80%), Gaps = 6/160 (3%)
Query: 107 GIVHKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + TE EL++HF KYGEIE++ +K+DP TGRSRGFAFIVF +TE+++K S D
Sbjct: 62 GLSWETTEKELRDHFGKYGEIESINVKTDPQTGRSRGFAFIVFTNTEAIDKVSAVD---- 117
Query: 166 GNHVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQR 225
H+IN+KK++ KKAKA+ GKIFVGGL+ E+ DEEIK +F QFGNI+E EMP+DK KSQR
Sbjct: 118 -EHIINSKKVDPKKAKARHGKIFVGGLTTEITDEEIKTYFGQFGNIVEVEMPFDKQKSQR 176
Query: 226 KNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE 265
K FCFITF+ E VV DLLK PKQKI KEVDVK+ATPKPE
Sbjct: 177 KGFCFITFDSEQVVTDLLKTPKQKIAGKEVDVKRATPKPE 216
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/55 (76%), Positives = 46/55 (83%)
Query: 445 IIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE 499
I+E EMP+DK KSQRK FCFITF+ E VV DLLK PKQKI KEVDVK+ATPKPE
Sbjct: 162 IVEVEMPFDKQKSQRKGFCFITFDSEQVVTDLLKTPKQKIAGKEVDVKRATPKPE 216
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 42/51 (82%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYF 658
+EL++HF KYGEIE++ +K+DP TGRSRGFAFIVF +TE+++K S D +
Sbjct: 70 KELRDHFGKYGEIESINVKTDPQTGRSRGFAFIVFTNTEAIDKVSAVDEHI 120
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 42/78 (53%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+FVGGLS E ++E++ HF ++G I + D + + F FI F + + +
Sbjct: 57 KLFVGGLSWETTEKELRDHFGKYGEIESINVKTDPQTGRSRGFAFIVFTNTEAIDKVSAV 116
Query: 246 PKQKINDKEVDVKKATPK 263
+ IN K+VD KKA +
Sbjct: 117 DEHIINSKKVDPKKAKAR 134
>gi|157110298|ref|XP_001651040.1| heterogeneous nuclear ribonucleoprotein [Aedes aegypti]
gi|157110302|ref|XP_001651042.1| heterogeneous nuclear ribonucleoprotein [Aedes aegypti]
gi|108878764|gb|EAT42989.1| AAEL005515-PD [Aedes aegypti]
gi|108878766|gb|EAT42991.1| AAEL005515-PA [Aedes aegypti]
Length = 280
Score = 212 bits (539), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 102/152 (67%), Positives = 126/152 (82%), Gaps = 5/152 (3%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+ELKEHF +YGEIE++ +K+DPNTGRSRGFAFIV+K +S++K V+A G+HVINNK
Sbjct: 50 KELKEHFGQYGEIESINVKTDPNTGRSRGFAFIVYKSADSIDK-----VVAAGDHVINNK 104
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
K++ KKAKA+ GKIFVGGL+ E+ DEEIK F QFGNI+E EMP+DK K+QRK FCFITF
Sbjct: 105 KVDPKKAKARHGKIFVGGLTTEISDEEIKTFFGQFGNIVEVEMPFDKQKNQRKGFCFITF 164
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKATPKPE 265
+ E VV +LLK PKQ I+ KEVDVKKATPKP+
Sbjct: 165 DSEQVVNELLKTPKQTISGKEVDVKKATPKPD 196
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/55 (70%), Positives = 46/55 (83%)
Query: 445 IIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE 499
I+E EMP+DK K+QRK FCFITF+ E VV +LLK PKQ I+ KEVDVKKATPKP+
Sbjct: 142 IVEVEMPFDKQKNQRKGFCFITFDSEQVVNELLKTPKQTISGKEVDVKKATPKPD 196
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 29/44 (65%), Positives = 39/44 (88%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
+ELKEHF +YGEIE++ +K+DPNTGRSRGFAFIV+K +S++K
Sbjct: 50 KELKEHFGQYGEIESINVKTDPNTGRSRGFAFIVYKSADSIDKV 93
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 47/88 (53%)
Query: 176 EAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEH 235
E+ + K+FVGGLS E D+E+K HF Q+G I + D + + + F FI ++
Sbjct: 27 ESSNVRDDDRKLFVGGLSWETSDKELKEHFGQYGEIESINVKTDPNTGRSRGFAFIVYKS 86
Query: 236 ESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ ++ IN+K+VD KKA +
Sbjct: 87 ADSIDKVVAAGDHVINNKKVDPKKAKAR 114
Score = 43.9 bits (102), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 83/192 (43%), Gaps = 23/192 (11%)
Query: 4 ESQDVEMTTTENGQENGGAPVSVKDDDRKLFCPLSSYLELDYLQLWQYFDWVSSSFSENC 63
ESQD G +NG +V+DDDRKLF S+ E +L ++F S N
Sbjct: 14 ESQD-----QNGGDQNGAESSNVRDDDRKLFVGGLSW-ETSDKELKEHFGQYGEIESINV 67
Query: 64 LLEDSIGKPL---------TVSCSHHYYLFDQILRTHFFYIMEAKNK--MVSHPGIVHKI 112
+ + G+ S D ++ +AK + + G+ +I
Sbjct: 68 KTDPNTGRSRGFAFIVYKSADSIDKVVAAGDHVINNKKVDPKKAKARHGKIFVGGLTTEI 127
Query: 113 T-EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVIN 171
+ EE+K F ++G I V + D + +GF FI F D+E + V +++ I+
Sbjct: 128 SDEEIKTFFGQFGNIVEVEMPFDKQKNQRKGFCFITF-DSEQV----VNELLKTPKQTIS 182
Query: 172 NKKIEAKKAKAK 183
K+++ KKA K
Sbjct: 183 GKEVDVKKATPK 194
>gi|195329216|ref|XP_002031307.1| GM25920 [Drosophila sechellia]
gi|194120250|gb|EDW42293.1| GM25920 [Drosophila sechellia]
Length = 345
Score = 211 bits (538), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 105/160 (65%), Positives = 128/160 (80%), Gaps = 6/160 (3%)
Query: 107 GIVHKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + TE EL++HF KYGEIE++ +K+DP TGRSRGFAFIVF +TE++EK S A
Sbjct: 62 GLSWETTEKELRDHFGKYGEIESINVKTDPQTGRSRGFAFIVFTNTEAIEKVS-----AV 116
Query: 166 GNHVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQR 225
H+IN+KK++ KKAKA+ GKIFVGGL+ E+ DEEIK +F QFGNI+E EMP+DK KSQR
Sbjct: 117 EEHIINSKKVDPKKAKARHGKIFVGGLTTEISDEEIKTYFGQFGNIVEVEMPFDKQKSQR 176
Query: 226 KNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE 265
K FCFITF+ E VV DLLK PKQKI KEVDVK+ATPKPE
Sbjct: 177 KGFCFITFDSEQVVTDLLKTPKQKIAGKEVDVKRATPKPE 216
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/55 (76%), Positives = 46/55 (83%)
Query: 445 IIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE 499
I+E EMP+DK KSQRK FCFITF+ E VV DLLK PKQKI KEVDVK+ATPKPE
Sbjct: 162 IVEVEMPFDKQKSQRKGFCFITFDSEQVVTDLLKTPKQKIAGKEVDVKRATPKPE 216
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/46 (65%), Positives = 40/46 (86%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASV 653
+EL++HF KYGEIE++ +K+DP TGRSRGFAFIVF +TE++EK S
Sbjct: 70 KELRDHFGKYGEIESINVKTDPQTGRSRGFAFIVFTNTEAIEKVSA 115
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 42/78 (53%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+FVGGLS E ++E++ HF ++G I + D + + F FI F + + +
Sbjct: 57 KLFVGGLSWETTEKELRDHFGKYGEIESINVKTDPQTGRSRGFAFIVFTNTEAIEKVSAV 116
Query: 246 PKQKINDKEVDVKKATPK 263
+ IN K+VD KKA +
Sbjct: 117 EEHIINSKKVDPKKAKAR 134
>gi|347963746|ref|XP_003436985.1| AGAP000399-PB [Anopheles gambiae str. PEST]
gi|333467054|gb|EGK96461.1| AGAP000399-PB [Anopheles gambiae str. PEST]
Length = 371
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 102/152 (67%), Positives = 125/152 (82%), Gaps = 5/152 (3%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+ELKEHFS+YG+IE++ +K+DPNTGRSRGFAFIV+K +S++K V+A HVINNK
Sbjct: 117 KELKEHFSQYGDIESINVKTDPNTGRSRGFAFIVYKSADSIDK-----VVAVSEHVINNK 171
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
K++ KKAKA+ GKIFVGGL+ E+ DEEIK F QFGNI+E EMP+DK K+QRK FCFITF
Sbjct: 172 KVDPKKAKARYGKIFVGGLTSEISDEEIKTFFGQFGNIVEVEMPFDKQKNQRKGFCFITF 231
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKATPKPE 265
+ E VV +LLK PKQ I+ KEVDVKKATPKPE
Sbjct: 232 DSEQVVNELLKTPKQTISGKEVDVKKATPKPE 263
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/55 (72%), Positives = 46/55 (83%)
Query: 445 IIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE 499
I+E EMP+DK K+QRK FCFITF+ E VV +LLK PKQ I+ KEVDVKKATPKPE
Sbjct: 209 IVEVEMPFDKQKNQRKGFCFITFDSEQVVNELLKTPKQTISGKEVDVKKATPKPE 263
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/43 (67%), Positives = 40/43 (93%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+ELKEHFS+YG+IE++ +K+DPNTGRSRGFAFIV+K +S++K
Sbjct: 117 KELKEHFSQYGDIESINVKTDPNTGRSRGFAFIVYKSADSIDK 159
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 47/78 (60%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+FVGGLS E D+E+K HF+Q+G+I + D + + + F FI ++ + ++
Sbjct: 104 KLFVGGLSWETSDKELKEHFSQYGDIESINVKTDPNTGRSRGFAFIVYKSADSIDKVVAV 163
Query: 246 PKQKINDKEVDVKKATPK 263
+ IN+K+VD KKA +
Sbjct: 164 SEHVINNKKVDPKKAKAR 181
>gi|347963748|ref|XP_310701.5| AGAP000399-PA [Anopheles gambiae str. PEST]
gi|333467053|gb|EAA06653.5| AGAP000399-PA [Anopheles gambiae str. PEST]
Length = 363
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 102/152 (67%), Positives = 125/152 (82%), Gaps = 5/152 (3%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+ELKEHFS+YG+IE++ +K+DPNTGRSRGFAFIV+K +S++K V+A HVINNK
Sbjct: 117 KELKEHFSQYGDIESINVKTDPNTGRSRGFAFIVYKSADSIDK-----VVAVSEHVINNK 171
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
K++ KKAKA+ GKIFVGGL+ E+ DEEIK F QFGNI+E EMP+DK K+QRK FCFITF
Sbjct: 172 KVDPKKAKARYGKIFVGGLTSEISDEEIKTFFGQFGNIVEVEMPFDKQKNQRKGFCFITF 231
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKATPKPE 265
+ E VV +LLK PKQ I+ KEVDVKKATPKPE
Sbjct: 232 DSEQVVNELLKTPKQTISGKEVDVKKATPKPE 263
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/55 (72%), Positives = 46/55 (83%)
Query: 445 IIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE 499
I+E EMP+DK K+QRK FCFITF+ E VV +LLK PKQ I+ KEVDVKKATPKPE
Sbjct: 209 IVEVEMPFDKQKNQRKGFCFITFDSEQVVNELLKTPKQTISGKEVDVKKATPKPE 263
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/44 (65%), Positives = 40/44 (90%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
+ELKEHFS+YG+IE++ +K+DPNTGRSRGFAFIV+K +S++K
Sbjct: 117 KELKEHFSQYGDIESINVKTDPNTGRSRGFAFIVYKSADSIDKV 160
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 47/78 (60%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+FVGGLS E D+E+K HF+Q+G+I + D + + + F FI ++ + ++
Sbjct: 104 KLFVGGLSWETSDKELKEHFSQYGDIESINVKTDPNTGRSRGFAFIVYKSADSIDKVVAV 163
Query: 246 PKQKINDKEVDVKKATPK 263
+ IN+K+VD KKA +
Sbjct: 164 SEHVINNKKVDPKKAKAR 181
>gi|269063712|emb|CAS85141.1| squid, variant B [Blattella germanica]
Length = 317
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 98/152 (64%), Positives = 127/152 (83%), Gaps = 5/152 (3%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+EL++HF YGEIE++ +K+DPNTGRSRGFAFIVF +S++K V++ G+HVINNK
Sbjct: 73 KELRDHFHTYGEIESINVKTDPNTGRSRGFAFIVFSQADSIDK-----VLSAGDHVINNK 127
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
K++ KKAKA+ GKIFVGGL P++ D++IK+ FAQ+G I+E EMP+DK+K+QRK FCFITF
Sbjct: 128 KVDPKKAKARHGKIFVGGLVPDLSDDDIKSFFAQYGTIVEVEMPFDKTKNQRKGFCFITF 187
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKATPKPE 265
E E VV +LLK+PKQ IN KEVDVKKATPKP+
Sbjct: 188 ESEQVVQELLKSPKQSINGKEVDVKKATPKPD 219
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/55 (74%), Positives = 48/55 (87%)
Query: 445 IIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE 499
I+E EMP+DK+K+QRK FCFITFE E VV +LLK+PKQ IN KEVDVKKATPKP+
Sbjct: 165 IVEVEMPFDKTKNQRKGFCFITFESEQVVQELLKSPKQSINGKEVDVKKATPKPD 219
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 27/43 (62%), Positives = 37/43 (86%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+EL++HF YGEIE++ +K+DPNTGRSRGFAFIVF +S++K
Sbjct: 73 KELRDHFHTYGEIESINVKTDPNTGRSRGFAFIVFSQADSIDK 115
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 42/78 (53%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+FVGGLS E D+E++ HF +G I + D + + + F FI F + +L
Sbjct: 60 KLFVGGLSWETTDKELRDHFHTYGEIESINVKTDPNTGRSRGFAFIVFSQADSIDKVLSA 119
Query: 246 PKQKINDKEVDVKKATPK 263
IN+K+VD KKA +
Sbjct: 120 GDHVINNKKVDPKKAKAR 137
Score = 43.1 bits (100), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 87/199 (43%), Gaps = 26/199 (13%)
Query: 1 MTAESQDVEMTTTENGQENGGAPVSVKDDDRKLFCPLSSYLELDYLQLWQYFDWVSSSFS 60
M E+ + E + ++G A +DDDRKLF S+ D +L +F S
Sbjct: 29 MNGEAGNGETGGGDAPADSGSAEAPGRDDDRKLFVGGLSWETTDK-ELRDHFHTYGEIES 87
Query: 61 ENCLLEDSIGKPLTVSCSHHYYLF------DQILRTHFFYI---------MEAKNKMVSH 105
N + + G+ S + +F D++L I +A++ +
Sbjct: 88 INVKTDPNTGR----SRGFAFIVFSQADSIDKVLSAGDHVINNKKVDPKKAKARHGKIFV 143
Query: 106 PGIVHKIT-EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIA 164
G+V ++ +++K F++YG I V + D + +GF FI F+ + V++++
Sbjct: 144 GGLVPDLSDDDIKSFFAQYGTIVEVEMPFDKTKNQRKGFCFITFESEQ-----VVQELLK 198
Query: 165 EGNHVINNKKIEAKKAKAK 183
IN K+++ KKA K
Sbjct: 199 SPKQSINGKEVDVKKATPK 217
>gi|269063710|emb|CAS85140.1| squid, variant A [Blattella germanica]
Length = 341
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 98/152 (64%), Positives = 127/152 (83%), Gaps = 5/152 (3%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+EL++HF YGEIE++ +K+DPNTGRSRGFAFIVF +S++K V++ G+HVINNK
Sbjct: 73 KELRDHFHTYGEIESINVKTDPNTGRSRGFAFIVFSQADSIDK-----VLSAGDHVINNK 127
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
K++ KKAKA+ GKIFVGGL P++ D++IK+ FAQ+G I+E EMP+DK+K+QRK FCFITF
Sbjct: 128 KVDPKKAKARHGKIFVGGLVPDLSDDDIKSFFAQYGTIVEVEMPFDKTKNQRKGFCFITF 187
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKATPKPE 265
E E VV +LLK+PKQ IN KEVDVKKATPKP+
Sbjct: 188 ESEQVVQELLKSPKQSINGKEVDVKKATPKPD 219
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/55 (74%), Positives = 48/55 (87%)
Query: 445 IIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE 499
I+E EMP+DK+K+QRK FCFITFE E VV +LLK+PKQ IN KEVDVKKATPKP+
Sbjct: 165 IVEVEMPFDKTKNQRKGFCFITFESEQVVQELLKSPKQSINGKEVDVKKATPKPD 219
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 27/43 (62%), Positives = 37/43 (86%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+EL++HF YGEIE++ +K+DPNTGRSRGFAFIVF +S++K
Sbjct: 73 KELRDHFHTYGEIESINVKTDPNTGRSRGFAFIVFSQADSIDK 115
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 42/78 (53%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+FVGGLS E D+E++ HF +G I + D + + + F FI F + +L
Sbjct: 60 KLFVGGLSWETTDKELRDHFHTYGEIESINVKTDPNTGRSRGFAFIVFSQADSIDKVLSA 119
Query: 246 PKQKINDKEVDVKKATPK 263
IN+K+VD KKA +
Sbjct: 120 GDHVINNKKVDPKKAKAR 137
Score = 43.1 bits (100), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 87/199 (43%), Gaps = 26/199 (13%)
Query: 1 MTAESQDVEMTTTENGQENGGAPVSVKDDDRKLFCPLSSYLELDYLQLWQYFDWVSSSFS 60
M E+ + E + ++G A +DDDRKLF S+ D +L +F S
Sbjct: 29 MNGEAGNGETGGGDAPADSGSAEAPGRDDDRKLFVGGLSWETTDK-ELRDHFHTYGEIES 87
Query: 61 ENCLLEDSIGKPLTVSCSHHYYLF------DQILRTHFFYI---------MEAKNKMVSH 105
N + + G+ S + +F D++L I +A++ +
Sbjct: 88 INVKTDPNTGR----SRGFAFIVFSQADSIDKVLSAGDHVINNKKVDPKKAKARHGKIFV 143
Query: 106 PGIVHKIT-EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIA 164
G+V ++ +++K F++YG I V + D + +GF FI F+ + V++++
Sbjct: 144 GGLVPDLSDDDIKSFFAQYGTIVEVEMPFDKTKNQRKGFCFITFESEQ-----VVQELLK 198
Query: 165 EGNHVINNKKIEAKKAKAK 183
IN K+++ KKA K
Sbjct: 199 SPKQSINGKEVDVKKATPK 217
>gi|269063722|emb|CAS85146.1| squid, variant G [Blattella germanica]
Length = 274
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 98/152 (64%), Positives = 127/152 (83%), Gaps = 5/152 (3%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+EL++HF YGEIE++ +K+DPNTGRSRGFAFIVF +S++K V++ G+HVINNK
Sbjct: 73 KELRDHFHTYGEIESINVKTDPNTGRSRGFAFIVFSQADSIDK-----VLSAGDHVINNK 127
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
K++ KKAKA+ GKIFVGGL P++ D++IK+ FAQ+G I+E EMP+DK+K+QRK FCFITF
Sbjct: 128 KVDPKKAKARHGKIFVGGLVPDLSDDDIKSFFAQYGTIVEVEMPFDKTKNQRKGFCFITF 187
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKATPKPE 265
E E VV +LLK+PKQ IN KEVDVKKATPKP+
Sbjct: 188 ESEQVVQELLKSPKQSINGKEVDVKKATPKPD 219
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/55 (74%), Positives = 48/55 (87%)
Query: 445 IIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE 499
I+E EMP+DK+K+QRK FCFITFE E VV +LLK+PKQ IN KEVDVKKATPKP+
Sbjct: 165 IVEVEMPFDKTKNQRKGFCFITFESEQVVQELLKSPKQSINGKEVDVKKATPKPD 219
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 27/43 (62%), Positives = 37/43 (86%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+EL++HF YGEIE++ +K+DPNTGRSRGFAFIVF +S++K
Sbjct: 73 KELRDHFHTYGEIESINVKTDPNTGRSRGFAFIVFSQADSIDK 115
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 42/78 (53%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+FVGGLS E D+E++ HF +G I + D + + + F FI F + +L
Sbjct: 60 KLFVGGLSWETTDKELRDHFHTYGEIESINVKTDPNTGRSRGFAFIVFSQADSIDKVLSA 119
Query: 246 PKQKINDKEVDVKKATPK 263
IN+K+VD KKA +
Sbjct: 120 GDHVINNKKVDPKKAKAR 137
Score = 42.7 bits (99), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 87/199 (43%), Gaps = 26/199 (13%)
Query: 1 MTAESQDVEMTTTENGQENGGAPVSVKDDDRKLFCPLSSYLELDYLQLWQYFDWVSSSFS 60
M E+ + E + ++G A +DDDRKLF S+ D +L +F S
Sbjct: 29 MNGEAGNGETGGGDAPADSGSAEAPGRDDDRKLFVGGLSWETTDK-ELRDHFHTYGEIES 87
Query: 61 ENCLLEDSIGKPLTVSCSHHYYLF------DQILRTHFFYI---------MEAKNKMVSH 105
N + + G+ S + +F D++L I +A++ +
Sbjct: 88 INVKTDPNTGR----SRGFAFIVFSQADSIDKVLSAGDHVINNKKVDPKKAKARHGKIFV 143
Query: 106 PGIVHKIT-EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIA 164
G+V ++ +++K F++YG I V + D + +GF FI F+ + V++++
Sbjct: 144 GGLVPDLSDDDIKSFFAQYGTIVEVEMPFDKTKNQRKGFCFITFESEQ-----VVQELLK 198
Query: 165 EGNHVINNKKIEAKKAKAK 183
IN K+++ KKA K
Sbjct: 199 SPKQSINGKEVDVKKATPK 217
>gi|269063716|emb|CAS85143.1| squid, variant D [Blattella germanica]
Length = 294
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 98/152 (64%), Positives = 127/152 (83%), Gaps = 5/152 (3%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+EL++HF YGEIE++ +K+DPNTGRSRGFAFIVF +S++K V++ G+HVINNK
Sbjct: 73 KELRDHFHTYGEIESINVKTDPNTGRSRGFAFIVFSQADSIDK-----VLSAGDHVINNK 127
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
K++ KKAKA+ GKIFVGGL P++ D++IK+ FAQ+G I+E EMP+DK+K+QRK FCFITF
Sbjct: 128 KVDPKKAKARHGKIFVGGLVPDLSDDDIKSFFAQYGTIVEVEMPFDKTKNQRKGFCFITF 187
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKATPKPE 265
E E VV +LLK+PKQ IN KEVDVKKATPKP+
Sbjct: 188 ESEQVVQELLKSPKQSINGKEVDVKKATPKPD 219
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/55 (74%), Positives = 48/55 (87%)
Query: 445 IIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE 499
I+E EMP+DK+K+QRK FCFITFE E VV +LLK+PKQ IN KEVDVKKATPKP+
Sbjct: 165 IVEVEMPFDKTKNQRKGFCFITFESEQVVQELLKSPKQSINGKEVDVKKATPKPD 219
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 27/43 (62%), Positives = 37/43 (86%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+EL++HF YGEIE++ +K+DPNTGRSRGFAFIVF +S++K
Sbjct: 73 KELRDHFHTYGEIESINVKTDPNTGRSRGFAFIVFSQADSIDK 115
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 42/78 (53%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+FVGGLS E D+E++ HF +G I + D + + + F FI F + +L
Sbjct: 60 KLFVGGLSWETTDKELRDHFHTYGEIESINVKTDPNTGRSRGFAFIVFSQADSIDKVLSA 119
Query: 246 PKQKINDKEVDVKKATPK 263
IN+K+VD KKA +
Sbjct: 120 GDHVINNKKVDPKKAKAR 137
Score = 43.1 bits (100), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 86/199 (43%), Gaps = 26/199 (13%)
Query: 1 MTAESQDVEMTTTENGQENGGAPVSVKDDDRKLFCPLSSYLELDYLQLWQYFDWVSSSFS 60
M E+ + E + ++G A +DDDRKLF S+ D +L +F S
Sbjct: 29 MNGEAGNGETGGGDAPADSGSAEAPGRDDDRKLFVGGLSWETTDK-ELRDHFHTYGEIES 87
Query: 61 ENCLLEDSIGKPLTVSCSHHYYLF------DQILRTHFFYI----MEAKNKMVSH----- 105
N + + G+ S + +F D++L I ++ K H
Sbjct: 88 INVKTDPNTGR----SRGFAFIVFSQADSIDKVLSAGDHVINNKKVDPKKAKARHGKIFV 143
Query: 106 PGIVHKIT-EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIA 164
G+V ++ +++K F++YG I V + D + +GF FI F+ + V++++
Sbjct: 144 GGLVPDLSDDDIKSFFAQYGTIVEVEMPFDKTKNQRKGFCFITFESEQ-----VVQELLK 198
Query: 165 EGNHVINNKKIEAKKAKAK 183
IN K+++ KKA K
Sbjct: 199 SPKQSINGKEVDVKKATPK 217
>gi|269063714|emb|CAS85142.1| squid, variant C [Blattella germanica]
Length = 318
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 98/152 (64%), Positives = 127/152 (83%), Gaps = 5/152 (3%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+EL++HF YGEIE++ +K+DPNTGRSRGFAFIVF +S++K V++ G+HVINNK
Sbjct: 73 KELRDHFHTYGEIESINVKTDPNTGRSRGFAFIVFSQADSIDK-----VLSAGDHVINNK 127
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
K++ KKAKA+ GKIFVGGL P++ D++IK+ FAQ+G I+E EMP+DK+K+QRK FCFITF
Sbjct: 128 KVDPKKAKARHGKIFVGGLVPDLSDDDIKSFFAQYGTIVEVEMPFDKTKNQRKGFCFITF 187
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKATPKPE 265
E E VV +LLK+PKQ IN KEVDVKKATPKP+
Sbjct: 188 ESEQVVQELLKSPKQSINGKEVDVKKATPKPD 219
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/55 (74%), Positives = 48/55 (87%)
Query: 445 IIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE 499
I+E EMP+DK+K+QRK FCFITFE E VV +LLK+PKQ IN KEVDVKKATPKP+
Sbjct: 165 IVEVEMPFDKTKNQRKGFCFITFESEQVVQELLKSPKQSINGKEVDVKKATPKPD 219
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 27/43 (62%), Positives = 37/43 (86%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+EL++HF YGEIE++ +K+DPNTGRSRGFAFIVF +S++K
Sbjct: 73 KELRDHFHTYGEIESINVKTDPNTGRSRGFAFIVFSQADSIDK 115
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 42/78 (53%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+FVGGLS E D+E++ HF +G I + D + + + F FI F + +L
Sbjct: 60 KLFVGGLSWETTDKELRDHFHTYGEIESINVKTDPNTGRSRGFAFIVFSQADSIDKVLSA 119
Query: 246 PKQKINDKEVDVKKATPK 263
IN+K+VD KKA +
Sbjct: 120 GDHVINNKKVDPKKAKAR 137
Score = 43.1 bits (100), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 86/199 (43%), Gaps = 26/199 (13%)
Query: 1 MTAESQDVEMTTTENGQENGGAPVSVKDDDRKLFCPLSSYLELDYLQLWQYFDWVSSSFS 60
M E+ + E + ++G A +DDDRKLF S+ D +L +F S
Sbjct: 29 MNGEAGNGETGGGDAPADSGSAEAPGRDDDRKLFVGGLSWETTDK-ELRDHFHTYGEIES 87
Query: 61 ENCLLEDSIGKPLTVSCSHHYYLF------DQILRTHFFYI----MEAKNKMVSH----- 105
N + + G+ S + +F D++L I ++ K H
Sbjct: 88 INVKTDPNTGR----SRGFAFIVFSQADSIDKVLSAGDHVINNKKVDPKKAKARHGKIFV 143
Query: 106 PGIVHKIT-EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIA 164
G+V ++ +++K F++YG I V + D + +GF FI F+ + V++++
Sbjct: 144 GGLVPDLSDDDIKSFFAQYGTIVEVEMPFDKTKNQRKGFCFITFESEQ-----VVQELLK 198
Query: 165 EGNHVINNKKIEAKKAKAK 183
IN K+++ KKA K
Sbjct: 199 SPKQSINGKEVDVKKATPK 217
>gi|307193268|gb|EFN76159.1| RNA-binding protein squid [Harpegnathos saltator]
Length = 334
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 101/152 (66%), Positives = 125/152 (82%), Gaps = 5/152 (3%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+EL+EHFS YG+IE++ +K+DPNTGRSRGFAFIVF ESL+K ++A G+HVINNK
Sbjct: 88 KELREHFSSYGDIESINVKTDPNTGRSRGFAFIVFAKAESLDK-----IMAAGDHVINNK 142
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
K++ KKAKA+ GKIFVGGLS E+ D++IK F+QFG I+E EMP+DK+K+QRK FCFITF
Sbjct: 143 KVDPKKAKARHGKIFVGGLSTELSDDDIKNFFSQFGTIVEVEMPFDKTKNQRKGFCFITF 202
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKATPKPE 265
E E VV +LLK KQ IN KEVDVKKATPKP+
Sbjct: 203 ESEQVVNELLKTSKQTINGKEVDVKKATPKPD 234
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/55 (72%), Positives = 46/55 (83%)
Query: 445 IIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE 499
I+E EMP+DK+K+QRK FCFITFE E VV +LLK KQ IN KEVDVKKATPKP+
Sbjct: 180 IVEVEMPFDKTKNQRKGFCFITFESEQVVNELLKTSKQTINGKEVDVKKATPKPD 234
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 38/43 (88%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+EL+EHFS YG+IE++ +K+DPNTGRSRGFAFIVF ESL+K
Sbjct: 88 KELREHFSSYGDIESINVKTDPNTGRSRGFAFIVFAKAESLDK 130
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 52/106 (49%), Gaps = 11/106 (10%)
Query: 158 SVEDVIAEGNHVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMP 217
S ED A GN N + K+FVGGLS E D+E++ HF+ +G+I +
Sbjct: 58 SQEDRSASGNQDSLNDR-----------KLFVGGLSWETTDKELREHFSSYGDIESINVK 106
Query: 218 YDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
D + + + F FI F + ++ IN+K+VD KKA +
Sbjct: 107 TDPNTGRSRGFAFIVFAKAESLDKIMAAGDHVINNKKVDPKKAKAR 152
>gi|269063720|emb|CAS85145.1| squid, variant F [Blattella germanica]
Length = 297
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 98/152 (64%), Positives = 127/152 (83%), Gaps = 5/152 (3%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+EL++HF YGEIE++ +K+DPNTGRSRGFAFIVF +S++K V++ G+HVINNK
Sbjct: 73 KELRDHFHTYGEIESINVKTDPNTGRSRGFAFIVFSQADSIDK-----VLSAGDHVINNK 127
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
K++ KKAKA+ GKIFVGGL P++ D++IK+ FAQ+G I+E EMP+DK+K+QRK FCFITF
Sbjct: 128 KVDPKKAKARHGKIFVGGLVPDLSDDDIKSFFAQYGTIVEVEMPFDKTKNQRKGFCFITF 187
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKATPKPE 265
E E VV +LLK+PKQ IN KEVDVKKATPKP+
Sbjct: 188 ESEQVVQELLKSPKQSINGKEVDVKKATPKPD 219
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/55 (74%), Positives = 48/55 (87%)
Query: 445 IIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE 499
I+E EMP+DK+K+QRK FCFITFE E VV +LLK+PKQ IN KEVDVKKATPKP+
Sbjct: 165 IVEVEMPFDKTKNQRKGFCFITFESEQVVQELLKSPKQSINGKEVDVKKATPKPD 219
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 27/43 (62%), Positives = 37/43 (86%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+EL++HF YGEIE++ +K+DPNTGRSRGFAFIVF +S++K
Sbjct: 73 KELRDHFHTYGEIESINVKTDPNTGRSRGFAFIVFSQADSIDK 115
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 42/78 (53%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+FVGGLS E D+E++ HF +G I + D + + + F FI F + +L
Sbjct: 60 KLFVGGLSWETTDKELRDHFHTYGEIESINVKTDPNTGRSRGFAFIVFSQADSIDKVLSA 119
Query: 246 PKQKINDKEVDVKKATPK 263
IN+K+VD KKA +
Sbjct: 120 GDHVINNKKVDPKKAKAR 137
Score = 42.4 bits (98), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 86/199 (43%), Gaps = 26/199 (13%)
Query: 1 MTAESQDVEMTTTENGQENGGAPVSVKDDDRKLFCPLSSYLELDYLQLWQYFDWVSSSFS 60
M E+ + E + ++G A +DDDRKLF S+ D +L +F S
Sbjct: 29 MNGEAGNGETGGGDAPADSGSAEAPGRDDDRKLFVGGLSWETTDK-ELRDHFHTYGEIES 87
Query: 61 ENCLLEDSIGKPLTVSCSHHYYLF------DQILRTHFFYI----MEAKNKMVSH----- 105
N + + G+ S + +F D++L I ++ K H
Sbjct: 88 INVKTDPNTGR----SRGFAFIVFSQADSIDKVLSAGDHVINNKKVDPKKAKARHGKIFV 143
Query: 106 PGIVHKIT-EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIA 164
G+V ++ +++K F++YG I V + D + +GF FI F+ + V++++
Sbjct: 144 GGLVPDLSDDDIKSFFAQYGTIVEVEMPFDKTKNQRKGFCFITFESEQ-----VVQELLK 198
Query: 165 EGNHVINNKKIEAKKAKAK 183
IN K+++ KKA K
Sbjct: 199 SPKQSINGKEVDVKKATPK 217
>gi|269063718|emb|CAS85144.1| squid, variant E [Blattella germanica]
Length = 321
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 98/152 (64%), Positives = 127/152 (83%), Gaps = 5/152 (3%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+EL++HF YGEIE++ +K+DPNTGRSRGFAFIVF +S++K V++ G+HVINNK
Sbjct: 73 KELRDHFHTYGEIESINVKTDPNTGRSRGFAFIVFSQADSIDK-----VLSAGDHVINNK 127
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
K++ KKAKA+ GKIFVGGL P++ D++IK+ FAQ+G I+E EMP+DK+K+QRK FCFITF
Sbjct: 128 KVDPKKAKARHGKIFVGGLVPDLSDDDIKSFFAQYGTIVEVEMPFDKTKNQRKGFCFITF 187
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKATPKPE 265
E E VV +LLK+PKQ IN KEVDVKKATPKP+
Sbjct: 188 ESEQVVQELLKSPKQSINGKEVDVKKATPKPD 219
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/55 (74%), Positives = 48/55 (87%)
Query: 445 IIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE 499
I+E EMP+DK+K+QRK FCFITFE E VV +LLK+PKQ IN KEVDVKKATPKP+
Sbjct: 165 IVEVEMPFDKTKNQRKGFCFITFESEQVVQELLKSPKQSINGKEVDVKKATPKPD 219
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 27/43 (62%), Positives = 37/43 (86%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+EL++HF YGEIE++ +K+DPNTGRSRGFAFIVF +S++K
Sbjct: 73 KELRDHFHTYGEIESINVKTDPNTGRSRGFAFIVFSQADSIDK 115
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 42/78 (53%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+FVGGLS E D+E++ HF +G I + D + + + F FI F + +L
Sbjct: 60 KLFVGGLSWETTDKELRDHFHTYGEIESINVKTDPNTGRSRGFAFIVFSQADSIDKVLSA 119
Query: 246 PKQKINDKEVDVKKATPK 263
IN+K+VD KKA +
Sbjct: 120 GDHVINNKKVDPKKAKAR 137
Score = 42.4 bits (98), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 86/199 (43%), Gaps = 26/199 (13%)
Query: 1 MTAESQDVEMTTTENGQENGGAPVSVKDDDRKLFCPLSSYLELDYLQLWQYFDWVSSSFS 60
M E+ + E + ++G A +DDDRKLF S+ D +L +F S
Sbjct: 29 MNGEAGNGETGGGDAPADSGSAEAPGRDDDRKLFVGGLSWETTDK-ELRDHFHTYGEIES 87
Query: 61 ENCLLEDSIGKPLTVSCSHHYYLF------DQILRTHFFYI----MEAKNKMVSH----- 105
N + + G+ S + +F D++L I ++ K H
Sbjct: 88 INVKTDPNTGR----SRGFAFIVFSQADSIDKVLSAGDHVINNKKVDPKKAKARHGKIFV 143
Query: 106 PGIVHKIT-EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIA 164
G+V ++ +++K F++YG I V + D + +GF FI F+ + V++++
Sbjct: 144 GGLVPDLSDDDIKSFFAQYGTIVEVEMPFDKTKNQRKGFCFITFESEQ-----VVQELLK 198
Query: 165 EGNHVINNKKIEAKKAKAK 183
IN K+++ KKA K
Sbjct: 199 SPKQSINGKEVDVKKATPK 217
>gi|170051646|ref|XP_001861859.1| heterogeneous nuclear ribonucleoprotein [Culex quinquefasciatus]
gi|167872815|gb|EDS36198.1| heterogeneous nuclear ribonucleoprotein [Culex quinquefasciatus]
Length = 308
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 99/152 (65%), Positives = 126/152 (82%), Gaps = 5/152 (3%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+ELKEHF +YG+IE++ +K+DPNTGRSRGFAFIV+K +S++K V+A G+HVINNK
Sbjct: 54 KELKEHFGQYGDIESINVKTDPNTGRSRGFAFIVYKSADSIDK-----VVAAGDHVINNK 108
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
K++ KKAKA+ GKIFVGGL+ E+ D+EIK F QFGNI++ EMP+DK K+QRK FCFITF
Sbjct: 109 KVDPKKAKARHGKIFVGGLTTEISDDEIKTFFGQFGNIVDVEMPFDKQKNQRKGFCFITF 168
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKATPKPE 265
+ E VV +LLK PKQ I+ KEVDVKKATPKP+
Sbjct: 169 DSEQVVNELLKTPKQTISGKEVDVKKATPKPD 200
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/55 (69%), Positives = 46/55 (83%)
Query: 445 IIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE 499
I++ EMP+DK K+QRK FCFITF+ E VV +LLK PKQ I+ KEVDVKKATPKP+
Sbjct: 146 IVDVEMPFDKQKNQRKGFCFITFDSEQVVNELLKTPKQTISGKEVDVKKATPKPD 200
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/43 (65%), Positives = 39/43 (90%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+ELKEHF +YG+IE++ +K+DPNTGRSRGFAFIV+K +S++K
Sbjct: 54 KELKEHFGQYGDIESINVKTDPNTGRSRGFAFIVYKSADSIDK 96
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 45/78 (57%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+FVGGLS E D+E+K HF Q+G+I + D + + + F FI ++ + ++
Sbjct: 41 KLFVGGLSWETSDKELKEHFGQYGDIESINVKTDPNTGRSRGFAFIVYKSADSIDKVVAA 100
Query: 246 PKQKINDKEVDVKKATPK 263
IN+K+VD KKA +
Sbjct: 101 GDHVINNKKVDPKKAKAR 118
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 85/197 (43%), Gaps = 20/197 (10%)
Query: 1 MTAESQDVEMT--TTENGQENGGAPVSVKDDDRKLFCPLSSYLELDYLQLWQYFDWVSSS 58
M QDV+ +NG G V+DDDRKLF S+ E +L ++F
Sbjct: 8 MNGNGQDVDQNGDQQDNGANGSGDSAPVRDDDRKLFVGGLSW-ETSDKELKEHFGQYGDI 66
Query: 59 FSENCLLEDSIGKP--LTVSCSHHYYLFDQILRTHFFYI---------MEAKNKMVSHPG 107
S N + + G+ D+++ I +A++ + G
Sbjct: 67 ESINVKTDPNTGRSRGFAFIVYKSADSIDKVVAAGDHVINNKKVDPKKAKARHGKIFVGG 126
Query: 108 IVHKIT-EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEG 166
+ +I+ +E+K F ++G I +V + D + +GF FI F D+E + V +++
Sbjct: 127 LTTEISDDEIKTFFGQFGNIVDVEMPFDKQKNQRKGFCFITF-DSEQV----VNELLKTP 181
Query: 167 NHVINNKKIEAKKAKAK 183
I+ K+++ KKA K
Sbjct: 182 KQTISGKEVDVKKATPK 198
>gi|195390397|ref|XP_002053855.1| GJ23113 [Drosophila virilis]
gi|194151941|gb|EDW67375.1| GJ23113 [Drosophila virilis]
Length = 343
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 102/160 (63%), Positives = 129/160 (80%), Gaps = 6/160 (3%)
Query: 107 GIVHKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + TE EL++HF K+GEIE++ +K+DP TGRSRGFAFIVF +TE++E+ S A
Sbjct: 63 GLSWETTEKELRDHFGKFGEIESINVKTDPQTGRSRGFAFIVFTNTEAIEQVS-----AA 117
Query: 166 GNHVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQR 225
H+IN+KK++ KKAKA+ GKIFVGGL+ E+ DEEIK +F+QFGNI+E EMP+DK KS R
Sbjct: 118 EEHIINSKKVDPKKAKARHGKIFVGGLTTEISDEEIKTYFSQFGNIVEVEMPFDKQKSHR 177
Query: 226 KNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE 265
K FCFITF+ E VV DLLK PKQKI+ KEVDVK+ATPKPE
Sbjct: 178 KGFCFITFDSEQVVTDLLKTPKQKISGKEVDVKRATPKPE 217
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/55 (74%), Positives = 46/55 (83%)
Query: 445 IIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE 499
I+E EMP+DK KS RK FCFITF+ E VV DLLK PKQKI+ KEVDVK+ATPKPE
Sbjct: 163 IVEVEMPFDKQKSHRKGFCFITFDSEQVVTDLLKTPKQKISGKEVDVKRATPKPE 217
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/46 (60%), Positives = 40/46 (86%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASV 653
+EL++HF K+GEIE++ +K+DP TGRSRGFAFIVF +TE++E+ S
Sbjct: 71 KELRDHFGKFGEIESINVKTDPQTGRSRGFAFIVFTNTEAIEQVSA 116
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 51/106 (48%), Gaps = 12/106 (11%)
Query: 158 SVEDVIAEGNHVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMP 217
S E+ A GN +++K+ FVGGLS E ++E++ HF +FG I +
Sbjct: 42 SSENAAAAGNQRDDDRKL------------FVGGLSWETTEKELRDHFGKFGEIESINVK 89
Query: 218 YDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
D + + F FI F + + + + IN K+VD KKA +
Sbjct: 90 TDPQTGRSRGFAFIVFTNTEAIEQVSAAEEHIINSKKVDPKKAKAR 135
>gi|194741284|ref|XP_001953119.1| GF17370 [Drosophila ananassae]
gi|190626178|gb|EDV41702.1| GF17370 [Drosophila ananassae]
Length = 343
Score = 209 bits (531), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 103/160 (64%), Positives = 127/160 (79%), Gaps = 6/160 (3%)
Query: 107 GIVHKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + TE EL++HF K+GEIE++ +K+DP TGRSRGFAFIVF TE+++K S A
Sbjct: 63 GLSWETTEKELRDHFGKFGEIESINVKTDPQTGRSRGFAFIVFTTTEAIDKVS-----AA 117
Query: 166 GNHVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQR 225
H+IN+KK++ KKAKA+ GKIFVGGL+ E+ DEEIK +F QFGNI+E EMP+DK KSQR
Sbjct: 118 EEHIINSKKVDPKKAKARHGKIFVGGLTTEITDEEIKTYFGQFGNIVEVEMPFDKQKSQR 177
Query: 226 KNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE 265
K FCFITF+ E VV DLLK PKQKI KEVDVK+ATPKPE
Sbjct: 178 KGFCFITFDAEQVVTDLLKTPKQKIAGKEVDVKRATPKPE 217
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/55 (76%), Positives = 46/55 (83%)
Query: 445 IIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE 499
I+E EMP+DK KSQRK FCFITF+ E VV DLLK PKQKI KEVDVK+ATPKPE
Sbjct: 163 IVEVEMPFDKQKSQRKGFCFITFDAEQVVTDLLKTPKQKIAGKEVDVKRATPKPE 217
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/46 (60%), Positives = 39/46 (84%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASV 653
+EL++HF K+GEIE++ +K+DP TGRSRGFAFIVF TE+++K S
Sbjct: 71 KELRDHFGKFGEIESINVKTDPQTGRSRGFAFIVFTTTEAIDKVSA 116
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 41/78 (52%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+FVGGLS E ++E++ HF +FG I + D + + F FI F + +
Sbjct: 58 KLFVGGLSWETTEKELRDHFGKFGEIESINVKTDPQTGRSRGFAFIVFTTTEAIDKVSAA 117
Query: 246 PKQKINDKEVDVKKATPK 263
+ IN K+VD KKA +
Sbjct: 118 EEHIINSKKVDPKKAKAR 135
>gi|322792842|gb|EFZ16675.1| hypothetical protein SINV_08972 [Solenopsis invicta]
Length = 335
Score = 209 bits (531), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 100/152 (65%), Positives = 125/152 (82%), Gaps = 5/152 (3%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+EL+EHFS YG+IE++ +K+DPNTGRSRGFAFIVF ESL+K +++ G+HVINNK
Sbjct: 70 KELREHFSAYGDIESINVKTDPNTGRSRGFAFIVFAKAESLDK-----IMSAGDHVINNK 124
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
K++ KKAKA+ GKIFVGGLS E+ D++IK F+QFG I+E EMP+DK+K+QRK FCFITF
Sbjct: 125 KVDPKKAKARHGKIFVGGLSTELSDDDIKNFFSQFGTIVEVEMPFDKTKNQRKGFCFITF 184
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKATPKPE 265
E E VV +LLK KQ IN KEVDVKKATPKP+
Sbjct: 185 ESEQVVNELLKTSKQTINGKEVDVKKATPKPD 216
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/55 (72%), Positives = 46/55 (83%)
Query: 445 IIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE 499
I+E EMP+DK+K+QRK FCFITFE E VV +LLK KQ IN KEVDVKKATPKP+
Sbjct: 162 IVEVEMPFDKTKNQRKGFCFITFESEQVVNELLKTSKQTINGKEVDVKKATPKPD 216
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 38/43 (88%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+EL+EHFS YG+IE++ +K+DPNTGRSRGFAFIVF ESL+K
Sbjct: 70 KELREHFSAYGDIESINVKTDPNTGRSRGFAFIVFAKAESLDK 112
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 55/105 (52%), Gaps = 1/105 (0%)
Query: 160 EDVIAEGNH-VINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPY 218
++ IA+ N ++ + A + K+FVGGLS E D+E++ HF+ +G+I +
Sbjct: 30 DNSIADNNQESQEDRSVRASQDSLNDRKLFVGGLSWETTDKELREHFSAYGDIESINVKT 89
Query: 219 DKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
D + + + F FI F + ++ IN+K+VD KKA +
Sbjct: 90 DPNTGRSRGFAFIVFAKAESLDKIMSAGDHVINNKKVDPKKAKAR 134
>gi|110758129|ref|XP_392465.3| PREDICTED: RNA-binding protein squid-like isoform 1 [Apis
mellifera]
Length = 358
Score = 208 bits (530), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 100/151 (66%), Positives = 124/151 (82%), Gaps = 5/151 (3%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+EL++HF YG+IE++ +K+DPNTGRSRGFAFIVF ESL+K ++A G+HVINNK
Sbjct: 68 KELRDHFGTYGDIESINVKTDPNTGRSRGFAFIVFAKAESLDK-----IMAAGDHVINNK 122
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
K++ KKAKA+ GKIFVGGLS E+ D++IK F+QFG I+E EMP+DK+K+QRK FCFITF
Sbjct: 123 KVDPKKAKARHGKIFVGGLSTELSDDDIKNFFSQFGTIVEVEMPFDKTKNQRKGFCFITF 182
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKATPKP 264
E E VV +LLK PKQ IN KEVDVKKATPKP
Sbjct: 183 ESEQVVNELLKTPKQTINGKEVDVKKATPKP 213
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 41/54 (75%), Positives = 46/54 (85%)
Query: 445 IIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKP 498
I+E EMP+DK+K+QRK FCFITFE E VV +LLK PKQ IN KEVDVKKATPKP
Sbjct: 160 IVEVEMPFDKTKNQRKGFCFITFESEQVVNELLKTPKQTINGKEVDVKKATPKP 213
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/43 (65%), Positives = 37/43 (86%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+EL++HF YG+IE++ +K+DPNTGRSRGFAFIVF ESL+K
Sbjct: 68 KELRDHFGTYGDIESINVKTDPNTGRSRGFAFIVFAKAESLDK 110
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 43/78 (55%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+FVGGLS E D+E++ HF +G+I + D + + + F FI F + ++
Sbjct: 55 KLFVGGLSWETTDKELRDHFGTYGDIESINVKTDPNTGRSRGFAFIVFAKAESLDKIMAA 114
Query: 246 PKQKINDKEVDVKKATPK 263
IN+K+VD KKA +
Sbjct: 115 GDHVINNKKVDPKKAKAR 132
>gi|270001992|gb|EEZ98439.1| hypothetical protein TcasGA2_TC000928 [Tribolium castaneum]
Length = 344
Score = 208 bits (529), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 98/152 (64%), Positives = 126/152 (82%), Gaps = 5/152 (3%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+EL++HF +YGEIE++ +K+DPNTGRSRGFAFIVF + E+++K V+A G H+INNK
Sbjct: 73 KELRDHFGQYGEIESINVKTDPNTGRSRGFAFIVFNNAEAIDK-----VVAAGEHIINNK 127
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
K++ KKAKA+ GKIFVGGL+ E+ D++IK F+Q+G IIE EMP+DK+K+QRK FCFITF
Sbjct: 128 KVDPKKAKARHGKIFVGGLTNELSDDDIKNFFSQYGTIIEVEMPFDKTKNQRKGFCFITF 187
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKATPKPE 265
E E VV +LLK PKQ I DKEVDVKKATPKP+
Sbjct: 188 ESEQVVNELLKTPKQTIKDKEVDVKKATPKPD 219
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/55 (76%), Positives = 47/55 (85%)
Query: 445 IIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE 499
IIE EMP+DK+K+QRK FCFITFE E VV +LLK PKQ I DKEVDVKKATPKP+
Sbjct: 165 IIEVEMPFDKTKNQRKGFCFITFESEQVVNELLKTPKQTIKDKEVDVKKATPKPD 219
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/43 (62%), Positives = 39/43 (90%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+EL++HF +YGEIE++ +K+DPNTGRSRGFAFIVF + E+++K
Sbjct: 73 KELRDHFGQYGEIESINVKTDPNTGRSRGFAFIVFNNAEAIDK 115
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 45/78 (57%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+FVGGLS E D+E++ HF Q+G I + D + + + F FI F + + ++
Sbjct: 60 KLFVGGLSWETTDKELRDHFGQYGEIESINVKTDPNTGRSRGFAFIVFNNAEAIDKVVAA 119
Query: 246 PKQKINDKEVDVKKATPK 263
+ IN+K+VD KKA +
Sbjct: 120 GEHIINNKKVDPKKAKAR 137
Score = 38.9 bits (89), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 75/178 (42%), Gaps = 18/178 (10%)
Query: 18 ENGGAPVSVKDDDRKLFCPLSSYLELDYLQLWQYFDWVSSSFSENCLLEDSIGKP--LTV 75
++G A +DDDRKLF S+ D +L +F S N + + G+
Sbjct: 46 DSGSADAPGRDDDRKLFVGGLSWETTDK-ELRDHFGQYGEIESINVKTDPNTGRSRGFAF 104
Query: 76 SCSHHYYLFDQILRTHFFYI----MEAKNKMVSHPGI-VHKITEEL-----KEHFSKYGE 125
++ D+++ I ++ K H I V +T EL K FS+YG
Sbjct: 105 IVFNNAEAIDKVVAAGEHIINNKKVDPKKAKARHGKIFVGGLTNELSDDDIKNFFSQYGT 164
Query: 126 IENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNKKIEAKKAKAK 183
I V + D + +GF FI F+ + V +++ I +K+++ KKA K
Sbjct: 165 IIEVEMPFDKTKNQRKGFCFITFESEQ-----VVNELLKTPKQTIKDKEVDVKKATPK 217
>gi|91076876|ref|XP_976197.1| PREDICTED: similar to Bmsqd-2 isoform 3 [Tribolium castaneum]
Length = 323
Score = 208 bits (529), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 98/152 (64%), Positives = 126/152 (82%), Gaps = 5/152 (3%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+EL++HF +YGEIE++ +K+DPNTGRSRGFAFIVF + E+++K V+A G H+INNK
Sbjct: 73 KELRDHFGQYGEIESINVKTDPNTGRSRGFAFIVFNNAEAIDK-----VVAAGEHIINNK 127
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
K++ KKAKA+ GKIFVGGL+ E+ D++IK F+Q+G IIE EMP+DK+K+QRK FCFITF
Sbjct: 128 KVDPKKAKARHGKIFVGGLTNELSDDDIKNFFSQYGTIIEVEMPFDKTKNQRKGFCFITF 187
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKATPKPE 265
E E VV +LLK PKQ I DKEVDVKKATPKP+
Sbjct: 188 ESEQVVNELLKTPKQTIKDKEVDVKKATPKPD 219
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/55 (76%), Positives = 47/55 (85%)
Query: 445 IIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE 499
IIE EMP+DK+K+QRK FCFITFE E VV +LLK PKQ I DKEVDVKKATPKP+
Sbjct: 165 IIEVEMPFDKTKNQRKGFCFITFESEQVVNELLKTPKQTIKDKEVDVKKATPKPD 219
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/43 (62%), Positives = 39/43 (90%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+EL++HF +YGEIE++ +K+DPNTGRSRGFAFIVF + E+++K
Sbjct: 73 KELRDHFGQYGEIESINVKTDPNTGRSRGFAFIVFNNAEAIDK 115
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 45/78 (57%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+FVGGLS E D+E++ HF Q+G I + D + + + F FI F + + ++
Sbjct: 60 KLFVGGLSWETTDKELRDHFGQYGEIESINVKTDPNTGRSRGFAFIVFNNAEAIDKVVAA 119
Query: 246 PKQKINDKEVDVKKATPK 263
+ IN+K+VD KKA +
Sbjct: 120 GEHIINNKKVDPKKAKAR 137
Score = 38.9 bits (89), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 75/178 (42%), Gaps = 18/178 (10%)
Query: 18 ENGGAPVSVKDDDRKLFCPLSSYLELDYLQLWQYFDWVSSSFSENCLLEDSIGKP--LTV 75
++G A +DDDRKLF S+ D +L +F S N + + G+
Sbjct: 46 DSGSADAPGRDDDRKLFVGGLSWETTDK-ELRDHFGQYGEIESINVKTDPNTGRSRGFAF 104
Query: 76 SCSHHYYLFDQILRTHFFYI----MEAKNKMVSHPGI-VHKITEEL-----KEHFSKYGE 125
++ D+++ I ++ K H I V +T EL K FS+YG
Sbjct: 105 IVFNNAEAIDKVVAAGEHIINNKKVDPKKAKARHGKIFVGGLTNELSDDDIKNFFSQYGT 164
Query: 126 IENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNKKIEAKKAKAK 183
I V + D + +GF FI F+ + V +++ I +K+++ KKA K
Sbjct: 165 IIEVEMPFDKTKNQRKGFCFITFESEQ-----VVNELLKTPKQTIKDKEVDVKKATPK 217
>gi|357602467|gb|EHJ63411.1| squid protein-like proteinue [Danaus plexippus]
Length = 288
Score = 208 bits (529), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 102/152 (67%), Positives = 125/152 (82%), Gaps = 5/152 (3%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+EL+EHFS YGEIE++ +K+DPNTGRSRGFAFIVFK +S++K V+A G+H INNK
Sbjct: 56 KELREHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDK-----VMAAGDHTINNK 110
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
K++ KKAKA+ GKIFVGGLS E+ D+EIK F+ FGNIIE EMP+DK+K+QRK FCFITF
Sbjct: 111 KVDPKKAKARHGKIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITF 170
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKATPKPE 265
E E VV +LLK PKQ I KEVDVK+ATPKP+
Sbjct: 171 ESEQVVNELLKTPKQTIAGKEVDVKRATPKPD 202
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 40/55 (72%), Positives = 46/55 (83%)
Query: 445 IIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE 499
IIE EMP+DK+K+QRK FCFITFE E VV +LLK PKQ I KEVDVK+ATPKP+
Sbjct: 148 IIEVEMPFDKTKNQRKGFCFITFESEQVVNELLKTPKQTIAGKEVDVKRATPKPD 202
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 39/43 (90%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+EL+EHFS YGEIE++ +K+DPNTGRSRGFAFIVFK +S++K
Sbjct: 56 KELREHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDK 98
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 44/78 (56%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+FVGGLS E D+E++ HF+ +G I + D + + + F FI F+ + ++
Sbjct: 43 KLFVGGLSWETTDKELREHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMAA 102
Query: 246 PKQKINDKEVDVKKATPK 263
IN+K+VD KKA +
Sbjct: 103 GDHTINNKKVDPKKAKAR 120
>gi|195113435|ref|XP_002001273.1| GI10695 [Drosophila mojavensis]
gi|193917867|gb|EDW16734.1| GI10695 [Drosophila mojavensis]
Length = 342
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 101/160 (63%), Positives = 129/160 (80%), Gaps = 6/160 (3%)
Query: 107 GIVHKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + TE EL++HF K+GEIE++ +K+DP TGRSRGFAFIVF +TE++++ S A
Sbjct: 63 GLSWETTEKELRDHFGKFGEIESINVKTDPQTGRSRGFAFIVFTNTEAIDQVS-----AA 117
Query: 166 GNHVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQR 225
H+IN+KK++ KKAKA+ GKIFVGGL+ E+ DEEIK +F+QFGNI+E EMP+DK KS R
Sbjct: 118 EEHIINSKKVDPKKAKARHGKIFVGGLTTEISDEEIKTYFSQFGNIVEVEMPFDKQKSHR 177
Query: 226 KNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE 265
K FCFITF+ E VV DLLK PKQKI+ KEVDVK+ATPKPE
Sbjct: 178 KGFCFITFDSEQVVTDLLKTPKQKISGKEVDVKRATPKPE 217
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/55 (74%), Positives = 46/55 (83%)
Query: 445 IIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE 499
I+E EMP+DK KS RK FCFITF+ E VV DLLK PKQKI+ KEVDVK+ATPKPE
Sbjct: 163 IVEVEMPFDKQKSHRKGFCFITFDSEQVVTDLLKTPKQKISGKEVDVKRATPKPE 217
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 40/46 (86%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASV 653
+EL++HF K+GEIE++ +K+DP TGRSRGFAFIVF +TE++++ S
Sbjct: 71 KELRDHFGKFGEIESINVKTDPQTGRSRGFAFIVFTNTEAIDQVSA 116
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 41/75 (54%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+FVGGLS E ++E++ HF +FG I + D + + F FI F + + +
Sbjct: 58 KLFVGGLSWETTEKELRDHFGKFGEIESINVKTDPQTGRSRGFAFIVFTNTEAIDQVSAA 117
Query: 246 PKQKINDKEVDVKKA 260
+ IN K+VD KKA
Sbjct: 118 EEHIINSKKVDPKKA 132
Score = 43.1 bits (100), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 80/186 (43%), Gaps = 27/186 (14%)
Query: 15 NGQENGGAPVS-VKDDDRKLFCPLSSYLELDYLQLWQYFDWVSSSFSENCLLEDSIGKPL 73
NG AP S +DDDRKLF S+ E +L +F S N + G+
Sbjct: 40 NGSSENTAPASNQRDDDRKLFVGGLSW-ETTEKELRDHFGKFGEIESINVKTDPQTGR-- 96
Query: 74 TVSCSHHYYLF------DQILRTHFFYI----MEAKNKMVSH-----PGIVHKIT-EELK 117
S + +F DQ+ I ++ K H G+ +I+ EE+K
Sbjct: 97 --SRGFAFIVFTNTEAIDQVSAAEEHIINSKKVDPKKAKARHGKIFVGGLTTEISDEEIK 154
Query: 118 EHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNKKIEA 177
+FS++G I V + D +GF FI F D+E + V D++ I+ K+++
Sbjct: 155 TYFSQFGNIVEVEMPFDKQKSHRKGFCFITF-DSEQV----VTDLLKTPKQKISGKEVDV 209
Query: 178 KKAKAK 183
K+A K
Sbjct: 210 KRATPK 215
>gi|340729954|ref|XP_003403258.1| PREDICTED: RNA-binding protein squid-like isoform 2 [Bombus
terrestris]
Length = 314
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 98/152 (64%), Positives = 125/152 (82%), Gaps = 5/152 (3%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+EL++HF YG+IE++ +K+DPNTGRSRGFAFIVF ESL+K ++A G+H+INNK
Sbjct: 68 KELRDHFGTYGDIESINVKTDPNTGRSRGFAFIVFAKAESLDK-----IMAAGDHIINNK 122
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
K++ KKAKA+ GK+FVGGLS E+ D++IK F+QFG I+E EMP+DK+K+QRK FCFITF
Sbjct: 123 KVDPKKAKARHGKVFVGGLSTELSDDDIKHFFSQFGTIVEVEMPFDKTKNQRKGFCFITF 182
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKATPKPE 265
E E VV +LLK PKQ IN KEVDVKKATPKP+
Sbjct: 183 ESEQVVNELLKTPKQTINGKEVDVKKATPKPD 214
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/55 (74%), Positives = 47/55 (85%)
Query: 445 IIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE 499
I+E EMP+DK+K+QRK FCFITFE E VV +LLK PKQ IN KEVDVKKATPKP+
Sbjct: 160 IVEVEMPFDKTKNQRKGFCFITFESEQVVNELLKTPKQTINGKEVDVKKATPKPD 214
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/43 (65%), Positives = 37/43 (86%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+EL++HF YG+IE++ +K+DPNTGRSRGFAFIVF ESL+K
Sbjct: 68 KELRDHFGTYGDIESINVKTDPNTGRSRGFAFIVFAKAESLDK 110
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 43/78 (55%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+FVGGLS E D+E++ HF +G+I + D + + + F FI F + ++
Sbjct: 55 KLFVGGLSWETTDKELRDHFGTYGDIESINVKTDPNTGRSRGFAFIVFAKAESLDKIMAA 114
Query: 246 PKQKINDKEVDVKKATPK 263
IN+K+VD KKA +
Sbjct: 115 GDHIINNKKVDPKKAKAR 132
>gi|350396363|ref|XP_003484529.1| PREDICTED: RNA-binding protein squid-like isoform 1 [Bombus
impatiens]
Length = 314
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 98/152 (64%), Positives = 125/152 (82%), Gaps = 5/152 (3%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+EL++HF YG+IE++ +K+DPNTGRSRGFAFIVF ESL+K ++A G+H+INNK
Sbjct: 68 KELRDHFGTYGDIESINVKTDPNTGRSRGFAFIVFAKAESLDK-----IMAAGDHIINNK 122
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
K++ KKAKA+ GK+FVGGLS E+ D++IK F+QFG I+E EMP+DK+K+QRK FCFITF
Sbjct: 123 KVDPKKAKARHGKVFVGGLSTELSDDDIKHFFSQFGTIVEVEMPFDKTKNQRKGFCFITF 182
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKATPKPE 265
E E VV +LLK PKQ IN KEVDVKKATPKP+
Sbjct: 183 ESEQVVNELLKTPKQTINGKEVDVKKATPKPD 214
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/55 (74%), Positives = 47/55 (85%)
Query: 445 IIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE 499
I+E EMP+DK+K+QRK FCFITFE E VV +LLK PKQ IN KEVDVKKATPKP+
Sbjct: 160 IVEVEMPFDKTKNQRKGFCFITFESEQVVNELLKTPKQTINGKEVDVKKATPKPD 214
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/43 (65%), Positives = 37/43 (86%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+EL++HF YG+IE++ +K+DPNTGRSRGFAFIVF ESL+K
Sbjct: 68 KELRDHFGTYGDIESINVKTDPNTGRSRGFAFIVFAKAESLDK 110
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 43/78 (55%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+FVGGLS E D+E++ HF +G+I + D + + + F FI F + ++
Sbjct: 55 KLFVGGLSWETTDKELRDHFGTYGDIESINVKTDPNTGRSRGFAFIVFAKAESLDKIMAA 114
Query: 246 PKQKINDKEVDVKKATPK 263
IN+K+VD KKA +
Sbjct: 115 GDHIINNKKVDPKKAKAR 132
>gi|332028567|gb|EGI68604.1| RNA-binding protein squid [Acromyrmex echinatior]
Length = 316
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 100/152 (65%), Positives = 125/152 (82%), Gaps = 5/152 (3%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+EL+EHFS YG+IE++ +K+DPNTGRSRGFAFIVF ESL+K +++ G+HVINNK
Sbjct: 58 KELREHFSAYGDIESINVKTDPNTGRSRGFAFIVFAKAESLDK-----IMSAGDHVINNK 112
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
K++ KKAKA+ GKIFVGGLS E+ D++IK F+QFG I+E EMP+DK+K+QRK FCFITF
Sbjct: 113 KVDPKKAKARHGKIFVGGLSTELSDDDIKNFFSQFGTIVEVEMPFDKTKNQRKGFCFITF 172
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKATPKPE 265
E E VV +LLK KQ IN KEVDVKKATPKP+
Sbjct: 173 ESEQVVNELLKTSKQTINGKEVDVKKATPKPD 204
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 40/55 (72%), Positives = 46/55 (83%)
Query: 445 IIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE 499
I+E EMP+DK+K+QRK FCFITFE E VV +LLK KQ IN KEVDVKKATPKP+
Sbjct: 150 IVEVEMPFDKTKNQRKGFCFITFESEQVVNELLKTSKQTINGKEVDVKKATPKPD 204
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 38/43 (88%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+EL+EHFS YG+IE++ +K+DPNTGRSRGFAFIVF ESL+K
Sbjct: 58 KELREHFSAYGDIESINVKTDPNTGRSRGFAFIVFAKAESLDK 100
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 48/92 (52%)
Query: 172 NKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFI 231
N E + + K+FVGGLS E D+E++ HF+ +G+I + D + + + F FI
Sbjct: 31 NNVAENNQESQEDRKLFVGGLSWETTDKELREHFSAYGDIESINVKTDPNTGRSRGFAFI 90
Query: 232 TFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
F + ++ IN+K+VD KKA +
Sbjct: 91 VFAKAESLDKIMSAGDHVINNKKVDPKKAKAR 122
>gi|195036936|ref|XP_001989924.1| GH19060 [Drosophila grimshawi]
gi|193894120|gb|EDV92986.1| GH19060 [Drosophila grimshawi]
Length = 349
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 101/160 (63%), Positives = 127/160 (79%), Gaps = 6/160 (3%)
Query: 107 GIVHKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + TE EL++HF KYGEIE++ +K+DP TGRSRGFAFIVF +TE++++ S A
Sbjct: 65 GLSWETTEKELRDHFGKYGEIESINVKTDPQTGRSRGFAFIVFTNTEAIDQVS-----AA 119
Query: 166 GNHVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQR 225
H+IN+KK++ KKAKA+ GKIFVGGL+ E+ DEEIK +F+QFG I+E EMP+DK KS R
Sbjct: 120 EEHIINSKKVDPKKAKARHGKIFVGGLTTEISDEEIKTYFSQFGTIVEVEMPFDKQKSHR 179
Query: 226 KNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE 265
K FCFITF+ E VV DLLK PKQKI KEVDVK+ATPKPE
Sbjct: 180 KGFCFITFDSEQVVTDLLKTPKQKIAGKEVDVKRATPKPE 219
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/55 (74%), Positives = 45/55 (81%)
Query: 445 IIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE 499
I+E EMP+DK KS RK FCFITF+ E VV DLLK PKQKI KEVDVK+ATPKPE
Sbjct: 165 IVEVEMPFDKQKSHRKGFCFITFDSEQVVTDLLKTPKQKIAGKEVDVKRATPKPE 219
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/46 (60%), Positives = 40/46 (86%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASV 653
+EL++HF KYGEIE++ +K+DP TGRSRGFAFIVF +TE++++ S
Sbjct: 73 KELRDHFGKYGEIESINVKTDPQTGRSRGFAFIVFTNTEAIDQVSA 118
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 42/78 (53%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+FVGGLS E ++E++ HF ++G I + D + + F FI F + + +
Sbjct: 60 KLFVGGLSWETTEKELRDHFGKYGEIESINVKTDPQTGRSRGFAFIVFTNTEAIDQVSAA 119
Query: 246 PKQKINDKEVDVKKATPK 263
+ IN K+VD KKA +
Sbjct: 120 EEHIINSKKVDPKKAKAR 137
Score = 40.0 bits (92), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 76/179 (42%), Gaps = 19/179 (10%)
Query: 18 ENGGAPV-SVKDDDRKLFCPLSSYLELDYLQLWQYFDWVSSSFSENCLLEDSIGKP--LT 74
EN GA + +DDDRKLF S+ E +L +F S N + G+
Sbjct: 45 ENAGAVAGNQRDDDRKLFVGGLSW-ETTEKELRDHFGKYGEIESINVKTDPQTGRSRGFA 103
Query: 75 VSCSHHYYLFDQILRTHFFYI----MEAKNKMVSH-----PGIVHKIT-EELKEHFSKYG 124
+ DQ+ I ++ K H G+ +I+ EE+K +FS++G
Sbjct: 104 FIVFTNTEAIDQVSAAEEHIINSKKVDPKKAKARHGKIFVGGLTTEISDEEIKTYFSQFG 163
Query: 125 EIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNKKIEAKKAKAK 183
I V + D +GF FI F D+E + V D++ I K+++ K+A K
Sbjct: 164 TIVEVEMPFDKQKSHRKGFCFITF-DSEQV----VTDLLKTPKQKIAGKEVDVKRATPK 217
>gi|340729952|ref|XP_003403257.1| PREDICTED: RNA-binding protein squid-like isoform 1 [Bombus
terrestris]
Length = 362
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 98/151 (64%), Positives = 124/151 (82%), Gaps = 5/151 (3%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+EL++HF YG+IE++ +K+DPNTGRSRGFAFIVF ESL+K ++A G+H+INNK
Sbjct: 68 KELRDHFGTYGDIESINVKTDPNTGRSRGFAFIVFAKAESLDK-----IMAAGDHIINNK 122
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
K++ KKAKA+ GK+FVGGLS E+ D++IK F+QFG I+E EMP+DK+K+QRK FCFITF
Sbjct: 123 KVDPKKAKARHGKVFVGGLSTELSDDDIKHFFSQFGTIVEVEMPFDKTKNQRKGFCFITF 182
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKATPKP 264
E E VV +LLK PKQ IN KEVDVKKATPKP
Sbjct: 183 ESEQVVNELLKTPKQTINGKEVDVKKATPKP 213
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 41/54 (75%), Positives = 46/54 (85%)
Query: 445 IIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKP 498
I+E EMP+DK+K+QRK FCFITFE E VV +LLK PKQ IN KEVDVKKATPKP
Sbjct: 160 IVEVEMPFDKTKNQRKGFCFITFESEQVVNELLKTPKQTINGKEVDVKKATPKP 213
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/43 (65%), Positives = 37/43 (86%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+EL++HF YG+IE++ +K+DPNTGRSRGFAFIVF ESL+K
Sbjct: 68 KELRDHFGTYGDIESINVKTDPNTGRSRGFAFIVFAKAESLDK 110
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 43/78 (55%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+FVGGLS E D+E++ HF +G+I + D + + + F FI F + ++
Sbjct: 55 KLFVGGLSWETTDKELRDHFGTYGDIESINVKTDPNTGRSRGFAFIVFAKAESLDKIMAA 114
Query: 246 PKQKINDKEVDVKKATPK 263
IN+K+VD KKA +
Sbjct: 115 GDHIINNKKVDPKKAKAR 132
>gi|350396366|ref|XP_003484530.1| PREDICTED: RNA-binding protein squid-like isoform 2 [Bombus
impatiens]
Length = 362
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 98/151 (64%), Positives = 124/151 (82%), Gaps = 5/151 (3%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+EL++HF YG+IE++ +K+DPNTGRSRGFAFIVF ESL+K ++A G+H+INNK
Sbjct: 68 KELRDHFGTYGDIESINVKTDPNTGRSRGFAFIVFAKAESLDK-----IMAAGDHIINNK 122
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
K++ KKAKA+ GK+FVGGLS E+ D++IK F+QFG I+E EMP+DK+K+QRK FCFITF
Sbjct: 123 KVDPKKAKARHGKVFVGGLSTELSDDDIKHFFSQFGTIVEVEMPFDKTKNQRKGFCFITF 182
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKATPKP 264
E E VV +LLK PKQ IN KEVDVKKATPKP
Sbjct: 183 ESEQVVNELLKTPKQTINGKEVDVKKATPKP 213
Score = 89.0 bits (219), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 41/54 (75%), Positives = 46/54 (85%)
Query: 445 IIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKP 498
I+E EMP+DK+K+QRK FCFITFE E VV +LLK PKQ IN KEVDVKKATPKP
Sbjct: 160 IVEVEMPFDKTKNQRKGFCFITFESEQVVNELLKTPKQTINGKEVDVKKATPKP 213
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/43 (65%), Positives = 37/43 (86%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+EL++HF YG+IE++ +K+DPNTGRSRGFAFIVF ESL+K
Sbjct: 68 KELRDHFGTYGDIESINVKTDPNTGRSRGFAFIVFAKAESLDK 110
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 43/78 (55%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+FVGGLS E D+E++ HF +G+I + D + + + F FI F + ++
Sbjct: 55 KLFVGGLSWETTDKELRDHFGTYGDIESINVKTDPNTGRSRGFAFIVFAKAESLDKIMAA 114
Query: 246 PKQKINDKEVDVKKATPK 263
IN+K+VD KKA +
Sbjct: 115 GDHIINNKKVDPKKAKAR 132
>gi|307178992|gb|EFN67508.1| RNA-binding protein squid [Camponotus floridanus]
Length = 327
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 100/152 (65%), Positives = 124/152 (81%), Gaps = 5/152 (3%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+EL+EHFS YG+IE++ +K+DPNTGRSRGFAFIVF ESL+K ++ G+HVINNK
Sbjct: 60 KELREHFSTYGDIESINVKTDPNTGRSRGFAFIVFAKAESLDK-----IMGAGDHVINNK 114
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
K++ KKAKA+ GKIFVGGLS E+ D++IK F+QFG I+E EMP+DK+K+QRK FCFITF
Sbjct: 115 KVDPKKAKARHGKIFVGGLSTELSDDDIKNFFSQFGTIVEVEMPFDKTKNQRKGFCFITF 174
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKATPKPE 265
E E VV +LLK KQ IN KEVDVKKATPKP+
Sbjct: 175 ESEQVVNELLKTSKQTINGKEVDVKKATPKPD 206
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 40/55 (72%), Positives = 46/55 (83%)
Query: 445 IIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE 499
I+E EMP+DK+K+QRK FCFITFE E VV +LLK KQ IN KEVDVKKATPKP+
Sbjct: 152 IVEVEMPFDKTKNQRKGFCFITFESEQVVNELLKTSKQTINGKEVDVKKATPKPD 206
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 38/43 (88%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+EL+EHFS YG+IE++ +K+DPNTGRSRGFAFIVF ESL+K
Sbjct: 60 KELREHFSTYGDIESINVKTDPNTGRSRGFAFIVFAKAESLDK 102
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 44/78 (56%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+FVGGLS E D+E++ HF+ +G+I + D + + + F FI F + ++
Sbjct: 47 KLFVGGLSWETTDKELREHFSTYGDIESINVKTDPNTGRSRGFAFIVFAKAESLDKIMGA 106
Query: 246 PKQKINDKEVDVKKATPK 263
IN+K+VD KKA +
Sbjct: 107 GDHVINNKKVDPKKAKAR 124
>gi|321459101|gb|EFX70158.1| hypothetical protein DAPPUDRAFT_189289 [Daphnia pulex]
Length = 334
Score = 206 bits (525), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 98/155 (63%), Positives = 125/155 (80%), Gaps = 5/155 (3%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+EL+EHF KYGEIE++T+K DP TGRSRGFAF+VFK E+L+K V+ G H+IN K
Sbjct: 82 KELREHFGKYGEIESITVKMDPQTGRSRGFAFLVFKSAENLDK-----VMNAGEHIINGK 136
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
+++ KKAKA+SGKIFVGGL + +E I++ F FGNI+E EMP+D+ K+QRKNFCFIT+
Sbjct: 137 RVDPKKAKARSGKIFVGGLPQDTTEETIRSFFGTFGNIVEIEMPFDRVKNQRKNFCFITY 196
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFG 268
++E+VV DLLK PKQ IN KEVDVKKATPKP+ FG
Sbjct: 197 DNENVVFDLLKTPKQVINGKEVDVKKATPKPDSFG 231
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/58 (72%), Positives = 51/58 (87%)
Query: 445 IIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFG 502
I+E EMP+D+ K+QRKNFCFIT+++E+VV DLLK PKQ IN KEVDVKKATPKP+ FG
Sbjct: 174 IVEIEMPFDRVKNQRKNFCFITYDNENVVFDLLKTPKQVINGKEVDVKKATPKPDSFG 231
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 38/43 (88%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+EL+EHF KYGEIE++T+K DP TGRSRGFAF+VFK E+L+K
Sbjct: 82 KELREHFGKYGEIESITVKMDPQTGRSRGFAFLVFKSAENLDK 124
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 43/84 (51%)
Query: 180 AKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVV 239
K + K+FVGGLS D+E++ HF ++G I + D + + F F+ F+ +
Sbjct: 63 GKDEDRKLFVGGLSWATTDKELREHFGKYGEIESITVKMDPQTGRSRGFAFLVFKSAENL 122
Query: 240 IDLLKNPKQKINDKEVDVKKATPK 263
++ + IN K VD KKA +
Sbjct: 123 DKVMNAGEHIINGKRVDPKKAKAR 146
>gi|322786135|gb|EFZ12742.1| hypothetical protein SINV_01194 [Solenopsis invicta]
Length = 330
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 99/150 (66%), Positives = 124/150 (82%), Gaps = 5/150 (3%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+EL+EHFS YG+IE++ +K+DPNTGRSRGFAFIVF E+L+K +++ G+HVINNK
Sbjct: 58 KELREHFSTYGDIESINVKTDPNTGRSRGFAFIVFAKAEALDK-----IMSAGDHVINNK 112
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
K++ KKAKA+ GKIFVGGLS E+ D++IK F+QFGNI+E EMP+DK+K+QRK FCFITF
Sbjct: 113 KVDPKKAKARHGKIFVGGLSTELSDDDIKNFFSQFGNIVEVEMPFDKTKNQRKGFCFITF 172
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKATPK 263
E E VV +LLK PKQ IN K VDVKKATPK
Sbjct: 173 ESEQVVNELLKTPKQTINGKAVDVKKATPK 202
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/53 (73%), Positives = 44/53 (83%)
Query: 445 IIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 497
I+E EMP+DK+K+QRK FCFITFE E VV +LLK PKQ IN K VDVKKATPK
Sbjct: 150 IVEVEMPFDKTKNQRKGFCFITFESEQVVNELLKTPKQTINGKAVDVKKATPK 202
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/43 (67%), Positives = 38/43 (88%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+EL+EHFS YG+IE++ +K+DPNTGRSRGFAFIVF E+L+K
Sbjct: 58 KELREHFSTYGDIESINVKTDPNTGRSRGFAFIVFAKAEALDK 100
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 44/78 (56%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+FVGGLS E D+E++ HF+ +G+I + D + + + F FI F + ++
Sbjct: 45 KLFVGGLSWETTDKELREHFSTYGDIESINVKTDPNTGRSRGFAFIVFAKAEALDKIMSA 104
Query: 246 PKQKINDKEVDVKKATPK 263
IN+K+VD KKA +
Sbjct: 105 GDHVINNKKVDPKKAKAR 122
>gi|332027282|gb|EGI67366.1| RNA-binding protein squid [Acromyrmex echinatior]
Length = 306
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 99/150 (66%), Positives = 124/150 (82%), Gaps = 5/150 (3%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+EL+EHFS YG+IE++ +K+DPNTGRSRGFAFIVF E+L+K +++ G+HVINNK
Sbjct: 61 KELREHFSTYGDIESINVKTDPNTGRSRGFAFIVFAKAEALDK-----IMSAGDHVINNK 115
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
K++ KKAKA+ GKIFVGGLS E+ D++IK F+QFGNI+E EMP+DK+K+QRK FCFITF
Sbjct: 116 KVDPKKAKARHGKIFVGGLSTELSDDDIKNFFSQFGNIVEVEMPFDKTKNQRKGFCFITF 175
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKATPK 263
E E VV +LLK PKQ IN K VDVKKATPK
Sbjct: 176 ESEQVVNELLKTPKQTINGKAVDVKKATPK 205
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/53 (73%), Positives = 44/53 (83%)
Query: 445 IIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 497
I+E EMP+DK+K+QRK FCFITFE E VV +LLK PKQ IN K VDVKKATPK
Sbjct: 153 IVEVEMPFDKTKNQRKGFCFITFESEQVVNELLKTPKQTINGKAVDVKKATPK 205
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/43 (67%), Positives = 38/43 (88%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+EL+EHFS YG+IE++ +K+DPNTGRSRGFAFIVF E+L+K
Sbjct: 61 KELREHFSTYGDIESINVKTDPNTGRSRGFAFIVFAKAEALDK 103
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 44/78 (56%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+FVGGLS E D+E++ HF+ +G+I + D + + + F FI F + ++
Sbjct: 48 KLFVGGLSWETTDKELREHFSTYGDIESINVKTDPNTGRSRGFAFIVFAKAEALDKIMSA 107
Query: 246 PKQKINDKEVDVKKATPK 263
IN+K+VD KKA +
Sbjct: 108 GDHVINNKKVDPKKAKAR 125
>gi|195571113|ref|XP_002103548.1| GD20486 [Drosophila simulans]
gi|194199475|gb|EDX13051.1| GD20486 [Drosophila simulans]
Length = 345
Score = 206 bits (523), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 103/160 (64%), Positives = 126/160 (78%), Gaps = 6/160 (3%)
Query: 107 GIVHKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + TE EL++HF KYGEIE++ +K+DP TGRSRGFAFIVF +TE++EK S A
Sbjct: 62 GLSWETTEKELRDHFGKYGEIESINVKTDPQTGRSRGFAFIVFTNTEAIEKVS-----AV 116
Query: 166 GNHVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQR 225
H+IN+KK++ KAKA+ GKIFVG L+ E+ DEEIK +F QFGNI+E EMP+DK KSQR
Sbjct: 117 EEHIINSKKVDLPKAKARHGKIFVGFLTTEISDEEIKTYFGQFGNIVEVEMPFDKQKSQR 176
Query: 226 KNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE 265
K FCFITF+ E VV DLLK PKQKI KEVDVK+ATPKPE
Sbjct: 177 KGFCFITFDSEQVVTDLLKTPKQKIAGKEVDVKRATPKPE 216
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/55 (76%), Positives = 46/55 (83%)
Query: 445 IIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE 499
I+E EMP+DK KSQRK FCFITF+ E VV DLLK PKQKI KEVDVK+ATPKPE
Sbjct: 162 IVEVEMPFDKQKSQRKGFCFITFDSEQVVTDLLKTPKQKIAGKEVDVKRATPKPE 216
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/46 (65%), Positives = 40/46 (86%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASV 653
+EL++HF KYGEIE++ +K+DP TGRSRGFAFIVF +TE++EK S
Sbjct: 70 KELRDHFGKYGEIESINVKTDPQTGRSRGFAFIVFTNTEAIEKVSA 115
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 42/78 (53%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+FVGGLS E ++E++ HF ++G I + D + + F FI F + + +
Sbjct: 57 KLFVGGLSWETTEKELRDHFGKYGEIESINVKTDPQTGRSRGFAFIVFTNTEAIEKVSAV 116
Query: 246 PKQKINDKEVDVKKATPK 263
+ IN K+VD+ KA +
Sbjct: 117 EEHIINSKKVDLPKAKAR 134
>gi|195451832|ref|XP_002073095.1| GK13337 [Drosophila willistoni]
gi|194169180|gb|EDW84081.1| GK13337 [Drosophila willistoni]
Length = 353
Score = 204 bits (520), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 99/160 (61%), Positives = 128/160 (80%), Gaps = 6/160 (3%)
Query: 107 GIVHKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + TE EL++HF K+G+I+++ +K+DP TGRSRGFAFIVF +TE+++K S +
Sbjct: 72 GLSWETTEKELRDHFGKFGDIDSINVKTDPQTGRSRGFAFIVFTNTEAIDKVSSAE---- 127
Query: 166 GNHVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQR 225
HVIN KK++ KKAKA+ GKIFVGGL+ E+ DEEI+ +F+QFG I+E EMP+DK KSQR
Sbjct: 128 -EHVINGKKVDPKKAKARHGKIFVGGLTTEISDEEIRTYFSQFGTIVEVEMPFDKQKSQR 186
Query: 226 KNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE 265
K FCFITF+ E VV DLLK PKQKI+ KEVDVK+ATPKPE
Sbjct: 187 KGFCFITFDSEQVVTDLLKTPKQKISGKEVDVKRATPKPE 226
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 42/55 (76%), Positives = 47/55 (85%)
Query: 445 IIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE 499
I+E EMP+DK KSQRK FCFITF+ E VV DLLK PKQKI+ KEVDVK+ATPKPE
Sbjct: 172 IVEVEMPFDKQKSQRKGFCFITFDSEQVVTDLLKTPKQKISGKEVDVKRATPKPE 226
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 40/45 (88%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKAS 652
+EL++HF K+G+I+++ +K+DP TGRSRGFAFIVF +TE+++K S
Sbjct: 80 KELRDHFGKFGDIDSINVKTDPQTGRSRGFAFIVFTNTEAIDKVS 124
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 42/75 (56%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+FVGGLS E ++E++ HF +FG+I + D + + F FI F + + +
Sbjct: 67 KLFVGGLSWETTEKELRDHFGKFGDIDSINVKTDPQTGRSRGFAFIVFTNTEAIDKVSSA 126
Query: 246 PKQKINDKEVDVKKA 260
+ IN K+VD KKA
Sbjct: 127 EEHVINGKKVDPKKA 141
>gi|195144350|ref|XP_002013159.1| GL23974 [Drosophila persimilis]
gi|194102102|gb|EDW24145.1| GL23974 [Drosophila persimilis]
Length = 341
Score = 204 bits (520), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 101/169 (59%), Positives = 132/169 (78%), Gaps = 8/169 (4%)
Query: 107 GIVHKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + TE EL++HF K+GEIE++ +K+DP TGRSRGFAFIVF +TE+++K S +
Sbjct: 61 GLSWETTEKELRDHFGKFGEIESINVKTDPQTGRSRGFAFIVFTNTEAIDKVS-----SA 115
Query: 166 GNHVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQR 225
G H+IN+KK++ KKAKA+ GKIFVGGL+ E+ DEEI+ +F+QFGNI+E EMP+DK KSQR
Sbjct: 116 GEHIINSKKVDPKKAKARHGKIFVGGLTTEISDEEIQTYFSQFGNIVEVEMPFDKQKSQR 175
Query: 226 KNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEP--FGVRGG 272
+FCFIT + E VV DLLK QKI+ KEVDVK+ATPKPE G+R G
Sbjct: 176 TDFCFITLDSEQVVTDLLKTSIQKISVKEVDVKRATPKPENQMMGMRWG 224
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/64 (64%), Positives = 48/64 (75%), Gaps = 2/64 (3%)
Query: 445 IIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEP--FG 502
I+E EMP+DK KSQR +FCFIT + E VV DLLK QKI+ KEVDVK+ATPKPE G
Sbjct: 161 IVEVEMPFDKQKSQRTDFCFITLDSEQVVTDLLKTSIQKISVKEVDVKRATPKPENQMMG 220
Query: 503 VRGG 506
+R G
Sbjct: 221 MRWG 224
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 40/45 (88%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKAS 652
+EL++HF K+GEIE++ +K+DP TGRSRGFAFIVF +TE+++K S
Sbjct: 69 KELRDHFGKFGEIESINVKTDPQTGRSRGFAFIVFTNTEAIDKVS 113
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 42/78 (53%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+FVGGLS E ++E++ HF +FG I + D + + F FI F + + +
Sbjct: 56 KLFVGGLSWETTEKELRDHFGKFGEIESINVKTDPQTGRSRGFAFIVFTNTEAIDKVSSA 115
Query: 246 PKQKINDKEVDVKKATPK 263
+ IN K+VD KKA +
Sbjct: 116 GEHIINSKKVDPKKAKAR 133
>gi|307180208|gb|EFN68241.1| RNA-binding protein squid [Camponotus floridanus]
Length = 296
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 98/150 (65%), Positives = 124/150 (82%), Gaps = 5/150 (3%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+EL+EHFS YG+IE++ +K+DPNTGRSRGFAFIVF E+L+K +++ G+HVINNK
Sbjct: 63 KELREHFSTYGDIESINVKTDPNTGRSRGFAFIVFAKAEALDK-----IMSAGDHVINNK 117
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
K++ KKAKA+ GKIFVGGLS E+ D++IK F+QFGNI+E EMP+DK+K+QRK FCFITF
Sbjct: 118 KVDPKKAKARHGKIFVGGLSTELSDDDIKNFFSQFGNIVEVEMPFDKTKNQRKGFCFITF 177
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKATPK 263
E E VV +LLK PKQ I+ K VDVKKATPK
Sbjct: 178 ESEQVVNELLKTPKQTISGKAVDVKKATPK 207
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/53 (71%), Positives = 44/53 (83%)
Query: 445 IIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 497
I+E EMP+DK+K+QRK FCFITFE E VV +LLK PKQ I+ K VDVKKATPK
Sbjct: 155 IVEVEMPFDKTKNQRKGFCFITFESEQVVNELLKTPKQTISGKAVDVKKATPK 207
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/43 (67%), Positives = 38/43 (88%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+EL+EHFS YG+IE++ +K+DPNTGRSRGFAFIVF E+L+K
Sbjct: 63 KELREHFSTYGDIESINVKTDPNTGRSRGFAFIVFAKAEALDK 105
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 44/78 (56%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+FVGGLS E D+E++ HF+ +G+I + D + + + F FI F + ++
Sbjct: 50 KLFVGGLSWETTDKELREHFSTYGDIESINVKTDPNTGRSRGFAFIVFAKAEALDKIMSA 109
Query: 246 PKQKINDKEVDVKKATPK 263
IN+K+VD KKA +
Sbjct: 110 GDHVINNKKVDPKKAKAR 127
>gi|307211208|gb|EFN87408.1| RNA-binding protein squid [Harpegnathos saltator]
Length = 331
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 97/150 (64%), Positives = 124/150 (82%), Gaps = 5/150 (3%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+EL++HF+ YG+IE++ +K+DPNTGRSRGFAFIVF E+L+K +++ G+HVINNK
Sbjct: 62 KELRDHFNTYGDIESINVKTDPNTGRSRGFAFIVFAKAEALDK-----IMSAGDHVINNK 116
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
K++ KKAKA+ GKIFVGGLS E+ D++IK F+QFGNI+E EMP+DK+K+QRK FCFITF
Sbjct: 117 KVDPKKAKARHGKIFVGGLSTELSDDDIKHFFSQFGNIVEVEMPFDKTKNQRKGFCFITF 176
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKATPK 263
E E VV +LLK PKQ IN K VDVKKATPK
Sbjct: 177 ESEQVVNELLKTPKQTINGKAVDVKKATPK 206
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/53 (73%), Positives = 44/53 (83%)
Query: 445 IIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 497
I+E EMP+DK+K+QRK FCFITFE E VV +LLK PKQ IN K VDVKKATPK
Sbjct: 154 IVEVEMPFDKTKNQRKGFCFITFESEQVVNELLKTPKQTINGKAVDVKKATPK 206
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/43 (62%), Positives = 38/43 (88%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+EL++HF+ YG+IE++ +K+DPNTGRSRGFAFIVF E+L+K
Sbjct: 62 KELRDHFNTYGDIESINVKTDPNTGRSRGFAFIVFAKAEALDK 104
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 53/101 (52%), Gaps = 4/101 (3%)
Query: 163 IAEGNHVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSK 222
+ +G + N ++++ + K+FVGGLS E D+E++ HF +G+I + D +
Sbjct: 30 VGDGGDAVENGSQDSQEDR----KLFVGGLSWETTDKELRDHFNTYGDIESINVKTDPNT 85
Query: 223 SQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ + F FI F + ++ IN+K+VD KKA +
Sbjct: 86 GRSRGFAFIVFAKAEALDKIMSAGDHVINNKKVDPKKAKAR 126
>gi|157108578|ref|XP_001650293.1| heterogeneous nuclear ribonucleoprotein [Aedes aegypti]
gi|108879258|gb|EAT43483.1| AAEL005049-PA [Aedes aegypti]
Length = 287
Score = 202 bits (515), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 100/169 (59%), Positives = 129/169 (76%), Gaps = 7/169 (4%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + TE+ L+ HF +YGEIE+V +K+DP TGRSRGFAFI+F ES++K V+A
Sbjct: 33 GLSKETTEQDLRNHFGQYGEIESVNVKTDPQTGRSRGFAFIIFNSPESIDK-----VVAF 87
Query: 166 GNHVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQR 225
+H +N KK++ KKAKA+ GKIFVGGLSPE DEE+K F QFGN++E EMP+DK K+QR
Sbjct: 88 EDHTVNGKKVDPKKAKARQGKIFVGGLSPETSDEEVKTFFEQFGNVVEMEMPFDKMKNQR 147
Query: 226 KNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGVRGGRG 274
K FCFIT++ E+VV +LLK PKQ + KEVDVK+ATPKPE + GGRG
Sbjct: 148 KGFCFITYDSEAVVTELLKTPKQTVGGKEVDVKRATPKPEGMQM-GGRG 195
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 40/64 (62%), Positives = 51/64 (79%), Gaps = 1/64 (1%)
Query: 445 IIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGVR 504
++E EMP+DK K+QRK FCFIT++ E+VV +LLK PKQ + KEVDVK+ATPKPE +
Sbjct: 133 VVEMEMPFDKMKNQRKGFCFITYDSEAVVTELLKTPKQTVGGKEVDVKRATPKPEGMQM- 191
Query: 505 GGRG 508
GGRG
Sbjct: 192 GGRG 195
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 40/52 (76%), Gaps = 1/52 (1%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
G+ + TE+ L+ HF +YGEIE+V +K+DP TGRSRGFAFI+F ES++K
Sbjct: 33 GLSKETTEQDLRNHFGQYGEIESVNVKTDPQTGRSRGFAFIIFNSPESIDKV 84
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 40/75 (53%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+FVGGLS E +++++ HF Q+G I + D + + F FI F + ++
Sbjct: 28 KLFVGGLSKETTEQDLRNHFGQYGEIESVNVKTDPQTGRSRGFAFIIFNSPESIDKVVAF 87
Query: 246 PKQKINDKEVDVKKA 260
+N K+VD KKA
Sbjct: 88 EDHTVNGKKVDPKKA 102
>gi|289739923|gb|ADD18709.1| RNA-binding protein musashi [Glossina morsitans morsitans]
Length = 295
Score = 202 bits (514), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 99/152 (65%), Positives = 122/152 (80%), Gaps = 5/152 (3%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+EL+EHFSK+GEIE++ +K+D TGRSRGFAFIVF ++EK V G HVINNK
Sbjct: 63 KELREHFSKFGEIESINVKTDSQTGRSRGFAFIVFTGPTAIEK-----VNEHGEHVINNK 117
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
K++ KKAKA+ GKIFVGGL+ E+ D+EIK +F QFGNI+E EMP+DK KSQRK FCFITF
Sbjct: 118 KVDPKKAKARHGKIFVGGLTNEISDDEIKTYFGQFGNIVEVEMPFDKQKSQRKAFCFITF 177
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKATPKPE 265
+ E VV +LLK PKQKI+ KEVDVK+ATPKP+
Sbjct: 178 DSEQVVSELLKTPKQKISGKEVDVKRATPKPD 209
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/55 (72%), Positives = 47/55 (85%)
Query: 445 IIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE 499
I+E EMP+DK KSQRK FCFITF+ E VV +LLK PKQKI+ KEVDVK+ATPKP+
Sbjct: 155 IVEVEMPFDKQKSQRKAFCFITFDSEQVVSELLKTPKQKISGKEVDVKRATPKPD 209
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 37/45 (82%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKAS 652
+EL+EHFSK+GEIE++ +K+D TGRSRGFAFIVF ++EK +
Sbjct: 63 KELREHFSKFGEIESINVKTDSQTGRSRGFAFIVFTGPTAIEKVN 107
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 48/84 (57%)
Query: 180 AKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVV 239
A+ K+FVGGLS E ++E++ HF++FG I + D + + F FI F + +
Sbjct: 44 ARDDDRKLFVGGLSWETSEKELREHFSKFGEIESINVKTDSQTGRSRGFAFIVFTGPTAI 103
Query: 240 IDLLKNPKQKINDKEVDVKKATPK 263
+ ++ + IN+K+VD KKA +
Sbjct: 104 EKVNEHGEHVINNKKVDPKKAKAR 127
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 96/217 (44%), Gaps = 44/217 (20%)
Query: 1 MTAESQDVEMT--------TTENGQENGGAP----------VSVKDDDRKLFCPLSSYLE 42
M ++QD EM +T N +ENGG+ + +DDDRKLF S+ E
Sbjct: 1 MADKTQDGEMNGEDFSQDVSTMNEKENGGSTGNTNGNANEFTNARDDDRKLFVGGLSW-E 59
Query: 43 LDYLQLWQYFDWVSSSFSENCLLEDSIGKPLTVSCSHHYYLFD-----QILRTHFFYIM- 96
+L ++F S N + G+ S + +F + + H +++
Sbjct: 60 TSEKELREHFSKFGEIESINVKTDSQTGR----SRGFAFIVFTGPTAIEKVNEHGEHVIN 115
Query: 97 ---------EAKNKMVSHPGIVHKIT-EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFI 146
+A++ + G+ ++I+ +E+K +F ++G I V + D + + F FI
Sbjct: 116 NKKVDPKKAKARHGKIFVGGLTNEISDDEIKTYFGQFGNIVEVEMPFDKQKSQRKAFCFI 175
Query: 147 VFKDTESLEKASVEDVIAEGNHVINNKKIEAKKAKAK 183
F D+E + V +++ I+ K+++ K+A K
Sbjct: 176 TF-DSEQV----VSELLKTPKQKISGKEVDVKRATPK 207
>gi|312373340|gb|EFR21099.1| hypothetical protein AND_17568 [Anopheles darlingi]
Length = 808
Score = 202 bits (514), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 96/152 (63%), Positives = 121/152 (79%), Gaps = 5/152 (3%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+ELKEHF YG+IE++ +K+DP TGRSRGFAFIV+K ES++K V+A G+H+INNK
Sbjct: 67 KELKEHFGTYGDIESINVKTDPVTGRSRGFAFIVYKQAESIDK-----VVAAGDHIINNK 121
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
K++ KKAKA+ GKIFVGGL+ E+ D+EIK F QFG I+E EMP+DK K+QRK FCFIT+
Sbjct: 122 KVDPKKAKARHGKIFVGGLTTEISDDEIKTFFGQFGTIVEVEMPFDKQKNQRKGFCFITY 181
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKATPKPE 265
+ VV +LLK PKQ I KEVDVKKATPKP+
Sbjct: 182 DSVQVVNELLKTPKQTICGKEVDVKKATPKPD 213
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/55 (67%), Positives = 44/55 (80%)
Query: 445 IIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE 499
I+E EMP+DK K+QRK FCFIT++ VV +LLK PKQ I KEVDVKKATPKP+
Sbjct: 159 IVEVEMPFDKQKNQRKGFCFITYDSVQVVNELLKTPKQTICGKEVDVKKATPKPD 213
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/43 (65%), Positives = 37/43 (86%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+ELKEHF YG+IE++ +K+DP TGRSRGFAFIV+K ES++K
Sbjct: 67 KELKEHFGTYGDIESINVKTDPVTGRSRGFAFIVYKQAESIDK 109
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%)
Query: 180 AKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVV 239
A+ K+FVGGLS E D+E+K HF +G+I + D + + F FI ++ +
Sbjct: 48 ARDDDRKLFVGGLSWETTDKELKEHFGTYGDIESINVKTDPVTGRSRGFAFIVYKQAESI 107
Query: 240 IDLLKNPKQKINDKEVDVKKA 260
++ IN+K+VD KKA
Sbjct: 108 DKVVAAGDHIINNKKVDPKKA 128
>gi|383851135|ref|XP_003701095.1| PREDICTED: RNA-binding protein squid-like isoform 2 [Megachile
rotundata]
Length = 362
Score = 202 bits (513), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 96/151 (63%), Positives = 122/151 (80%), Gaps = 5/151 (3%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+EL++HF YG+IE++ +K+DPNTGRSRGFAFIVF ESL+K +++ +H+IN K
Sbjct: 68 KELRDHFGTYGDIESINVKTDPNTGRSRGFAFIVFAKAESLDK-----IMSANDHIINGK 122
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
K++ KKAKA+ GKIFVGGLS E+ DE+IK F+QFG I++ EMP+DK+K+QRK FCFITF
Sbjct: 123 KVDPKKAKARHGKIFVGGLSTELSDEDIKNFFSQFGTIVDVEMPFDKTKNQRKGFCFITF 182
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKATPKP 264
E E VV +LLK PKQ IN KEVDVKKATPKP
Sbjct: 183 ESEQVVNELLKTPKQTINGKEVDVKKATPKP 213
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/54 (74%), Positives = 46/54 (85%)
Query: 445 IIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKP 498
I++ EMP+DK+K+QRK FCFITFE E VV +LLK PKQ IN KEVDVKKATPKP
Sbjct: 160 IVDVEMPFDKTKNQRKGFCFITFESEQVVNELLKTPKQTINGKEVDVKKATPKP 213
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/43 (65%), Positives = 37/43 (86%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+EL++HF YG+IE++ +K+DPNTGRSRGFAFIVF ESL+K
Sbjct: 68 KELRDHFGTYGDIESINVKTDPNTGRSRGFAFIVFAKAESLDK 110
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 42/78 (53%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+FVGGLS E D+E++ HF +G+I + D + + + F FI F + ++
Sbjct: 55 KLFVGGLSWETTDKELRDHFGTYGDIESINVKTDPNTGRSRGFAFIVFAKAESLDKIMSA 114
Query: 246 PKQKINDKEVDVKKATPK 263
IN K+VD KKA +
Sbjct: 115 NDHIINGKKVDPKKAKAR 132
>gi|332374124|gb|AEE62203.1| unknown [Dendroctonus ponderosae]
Length = 290
Score = 201 bits (512), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 97/152 (63%), Positives = 120/152 (78%), Gaps = 5/152 (3%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+EL+E+F KYGEIE++ +K+D TGRSRGFAFIVF+D AS++ V A G H IN K
Sbjct: 64 KELREYFGKYGEIESINVKTDSMTGRSRGFAFIVFQDA-----ASIDRVSAAGEHTINGK 118
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
K++ KKAKA+ GKIFVGG+SPE+ D++I +F Q+G I+E EMP+DK K+QRK FCFITF
Sbjct: 119 KVDPKKAKARHGKIFVGGISPELSDDDINEYFGQYGTIMEVEMPFDKQKNQRKGFCFITF 178
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKATPKPE 265
E E VV DLLK PKQ I DKEVDVKKATPKP+
Sbjct: 179 ESEQVVADLLKRPKQVIKDKEVDVKKATPKPD 210
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/55 (76%), Positives = 46/55 (83%)
Query: 445 IIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE 499
I+E EMP+DK K+QRK FCFITFE E VV DLLK PKQ I DKEVDVKKATPKP+
Sbjct: 156 IMEVEMPFDKQKNQRKGFCFITFESEQVVADLLKRPKQVIKDKEVDVKKATPKPD 210
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 38/46 (82%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASV 653
+EL+E+F KYGEIE++ +K+D TGRSRGFAFIVF+D S+++ S
Sbjct: 64 KELREYFGKYGEIESINVKTDSMTGRSRGFAFIVFQDAASIDRVSA 109
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 49/98 (50%)
Query: 166 GNHVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQR 225
G+ + + K K K+FVGGLS E D+E++ +F ++G I + D +
Sbjct: 31 GDAPVTDSGSADKPGKDDDRKLFVGGLSWETTDKELREYFGKYGEIESINVKTDSMTGRS 90
Query: 226 KNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ F FI F+ + + + + IN K+VD KKA +
Sbjct: 91 RGFAFIVFQDAASIDRVSAAGEHTINGKKVDPKKAKAR 128
Score = 43.1 bits (100), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 83/201 (41%), Gaps = 29/201 (14%)
Query: 5 SQDVEMTTTENGQENGG--APVSV--------KDDDRKLFCPLSSYLELDYLQLWQYFDW 54
SQDV + + Q NGG APV+ KDDDRKLF S+ D +L +YF
Sbjct: 15 SQDVTGDQSLD-QHNGGGDAPVTDSGSADKPGKDDDRKLFVGGLSWETTDK-ELREYFGK 72
Query: 55 VSSSFSENCLLEDSIGKP--LTVSCSHHYYLFDQILRTHFFYI----MEAKNKMVSHPGI 108
S N + G+ D++ I ++ K H I
Sbjct: 73 YGEIESINVKTDSMTGRSRGFAFIVFQDAASIDRVSAAGEHTINGKKVDPKKAKARHGKI 132
Query: 109 -VHKITEEL-----KEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDV 162
V I+ EL E+F +YG I V + D + +GF FI F+ + V D+
Sbjct: 133 FVGGISPELSDDDINEYFGQYGTIMEVEMPFDKQKNQRKGFCFITFESEQ-----VVADL 187
Query: 163 IAEGNHVINNKKIEAKKAKAK 183
+ VI +K+++ KKA K
Sbjct: 188 LKRPKQVIKDKEVDVKKATPK 208
>gi|383851133|ref|XP_003701094.1| PREDICTED: RNA-binding protein squid-like isoform 1 [Megachile
rotundata]
Length = 338
Score = 201 bits (512), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 96/151 (63%), Positives = 122/151 (80%), Gaps = 5/151 (3%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+EL++HF YG+IE++ +K+DPNTGRSRGFAFIVF ESL+K +++ +H+IN K
Sbjct: 68 KELRDHFGTYGDIESINVKTDPNTGRSRGFAFIVFAKAESLDK-----IMSANDHIINGK 122
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
K++ KKAKA+ GKIFVGGLS E+ DE+IK F+QFG I++ EMP+DK+K+QRK FCFITF
Sbjct: 123 KVDPKKAKARHGKIFVGGLSTELSDEDIKNFFSQFGTIVDVEMPFDKTKNQRKGFCFITF 182
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKATPKP 264
E E VV +LLK PKQ IN KEVDVKKATPKP
Sbjct: 183 ESEQVVNELLKTPKQTINGKEVDVKKATPKP 213
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/54 (74%), Positives = 46/54 (85%)
Query: 445 IIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKP 498
I++ EMP+DK+K+QRK FCFITFE E VV +LLK PKQ IN KEVDVKKATPKP
Sbjct: 160 IVDVEMPFDKTKNQRKGFCFITFESEQVVNELLKTPKQTINGKEVDVKKATPKP 213
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/43 (65%), Positives = 37/43 (86%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+EL++HF YG+IE++ +K+DPNTGRSRGFAFIVF ESL+K
Sbjct: 68 KELRDHFGTYGDIESINVKTDPNTGRSRGFAFIVFAKAESLDK 110
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 42/78 (53%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+FVGGLS E D+E++ HF +G+I + D + + + F FI F + ++
Sbjct: 55 KLFVGGLSWETTDKELRDHFGTYGDIESINVKTDPNTGRSRGFAFIVFAKAESLDKIMSA 114
Query: 246 PKQKINDKEVDVKKATPK 263
IN K+VD KKA +
Sbjct: 115 NDHIINGKKVDPKKAKAR 132
>gi|242024531|ref|XP_002432681.1| RNA-binding protein squid, putative [Pediculus humanus corporis]
gi|212518151|gb|EEB19943.1| RNA-binding protein squid, putative [Pediculus humanus corporis]
Length = 295
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 98/150 (65%), Positives = 121/150 (80%), Gaps = 5/150 (3%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+EL+EHFS++GEIE+V++K+DP +GRSRGFAFIVFKD ES+EK V+A G+H+IN K
Sbjct: 47 KELREHFSQFGEIESVSVKTDPASGRSRGFAFIVFKDVESIEK-----VMAAGDHIINCK 101
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
KI+ KKAKA+ GKIFVGGL E +E+I+ F QFG I+E E+P+DK K+Q+KNFCFITF
Sbjct: 102 KIDPKKAKARHGKIFVGGLDVETSEEDIRNFFGQFGTILEVELPFDKQKNQQKNFCFITF 161
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKATPK 263
E E V DLLK PKQ IN KEVDVKKA PK
Sbjct: 162 ESEQVTNDLLKQPKQTINGKEVDVKKANPK 191
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 38/53 (71%), Positives = 43/53 (81%)
Query: 445 IIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 497
I+E E+P+DK K+Q+KNFCFITFE E V DLLK PKQ IN KEVDVKKA PK
Sbjct: 139 ILEVELPFDKQKNQQKNFCFITFESEQVTNDLLKQPKQTINGKEVDVKKANPK 191
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/44 (70%), Positives = 41/44 (93%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
+EL+EHFS++GEIE+V++K+DP +GRSRGFAFIVFKD ES+EK
Sbjct: 47 KELREHFSQFGEIESVSVKTDPASGRSRGFAFIVFKDVESIEKV 90
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 43/78 (55%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+FVG LS E D+E++ HF+QFG I + D + + + F FI F+ + ++
Sbjct: 34 KLFVGRLSWETTDKELREHFSQFGEIESVSVKTDPASGRSRGFAFIVFKDVESIEKVMAA 93
Query: 246 PKQKINDKEVDVKKATPK 263
IN K++D KKA +
Sbjct: 94 GDHIINCKKIDPKKAKAR 111
>gi|158296283|ref|XP_001237856.2| AGAP006668-PA [Anopheles gambiae str. PEST]
gi|157016437|gb|EAU76642.2| AGAP006668-PA [Anopheles gambiae str. PEST]
Length = 360
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 97/160 (60%), Positives = 127/160 (79%), Gaps = 6/160 (3%)
Query: 107 GIVHKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + TE +L+EHF +YGEIE++ +K+DPNTGRSRGFAFIV+K ++S++K V+A
Sbjct: 74 GLSWETTEKDLREHFGQYGEIESINVKTDPNTGRSRGFAFIVYKASDSIDK-----VVAA 128
Query: 166 GNHVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQR 225
G HV+NNKK++ K+AKA+ GKIFVGGL+ ++ DEEIK F QFG I+E E+P+DK K+QR
Sbjct: 129 GEHVLNNKKVDPKRAKARPGKIFVGGLTSDISDEEIKTFFGQFGTIVEVELPFDKQKNQR 188
Query: 226 KNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE 265
K FCFIT+E VV +LLK PKQ I KEVDVKKATPKP+
Sbjct: 189 KGFCFITYESVQVVNELLKTPKQTIAGKEVDVKKATPKPD 228
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 37/55 (67%), Positives = 44/55 (80%)
Query: 445 IIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE 499
I+E E+P+DK K+QRK FCFIT+E VV +LLK PKQ I KEVDVKKATPKP+
Sbjct: 174 IVEVELPFDKQKNQRKGFCFITYESVQVVNELLKTPKQTIAGKEVDVKKATPKPD 228
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/43 (62%), Positives = 40/43 (93%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
++L+EHF +YGEIE++ +K+DPNTGRSRGFAFIV+K ++S++K
Sbjct: 82 KDLREHFGQYGEIESINVKTDPNTGRSRGFAFIVYKASDSIDK 124
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 48/85 (56%)
Query: 180 AKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVV 239
A+ K+FVGGLS E +++++ HF Q+G I + D + + + F FI ++ +
Sbjct: 63 ARDDERKLFVGGLSWETTEKDLREHFGQYGEIESINVKTDPNTGRSRGFAFIVYKASDSI 122
Query: 240 IDLLKNPKQKINDKEVDVKKATPKP 264
++ + +N+K+VD K+A +P
Sbjct: 123 DKVVAAGEHVLNNKKVDPKRAKARP 147
>gi|156554677|ref|XP_001600539.1| PREDICTED: RNA-binding protein squid-like [Nasonia vitripennis]
Length = 338
Score = 198 bits (504), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 94/151 (62%), Positives = 122/151 (80%), Gaps = 5/151 (3%)
Query: 115 ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNKK 174
EL++HFS +G+IE++ +K+DP TGRSRGFAFIVF ESL+KA +A G+H+INNKK
Sbjct: 71 ELRDHFSTFGDIESINVKTDPTTGRSRGFAFIVFAKAESLDKA-----MAHGDHIINNKK 125
Query: 175 IEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFE 234
++ KKAKA+ GKIFVGGLS E+ D++IK F+QFG I++ EMP+DK+K+QRK FCFITFE
Sbjct: 126 VDPKKAKARHGKIFVGGLSTELSDDDIKTFFSQFGTIVDVEMPFDKTKNQRKGFCFITFE 185
Query: 235 HESVVIDLLKNPKQKINDKEVDVKKATPKPE 265
E V +LLK KQ I+ KEV+VKKATP+PE
Sbjct: 186 SEQVANELLKTSKQTISGKEVEVKKATPRPE 216
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 45/55 (81%)
Query: 445 IIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE 499
I++ EMP+DK+K+QRK FCFITFE E V +LLK KQ I+ KEV+VKKATP+PE
Sbjct: 162 IVDVEMPFDKTKNQRKGFCFITFESEQVANELLKTSKQTISGKEVEVKKATPRPE 216
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/43 (65%), Positives = 37/43 (86%)
Query: 609 ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
EL++HFS +G+IE++ +K+DP TGRSRGFAFIVF ESL+KA
Sbjct: 71 ELRDHFSTFGDIESINVKTDPTTGRSRGFAFIVFAKAESLDKA 113
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 54/108 (50%), Gaps = 11/108 (10%)
Query: 156 KASVEDVIAEGNHVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETE 215
+ S ED A+GN N + K+FVGGLS E D+E++ HF+ FG+I
Sbjct: 38 QESQEDRSAQGNQDSLNDR-----------KLFVGGLSWETTDKELRDHFSTFGDIESIN 86
Query: 216 MPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ D + + + F FI F + + + IN+K+VD KKA +
Sbjct: 87 VKTDPTTGRSRGFAFIVFAKAESLDKAMAHGDHIINNKKVDPKKAKAR 134
>gi|112983696|ref|NP_001037323.1| squid protein homologue [Bombyx mori]
gi|784909|dbj|BAA07210.1| Bmsqd-1 [Bombyx mori]
Length = 287
Score = 196 bits (498), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 96/152 (63%), Positives = 121/152 (79%), Gaps = 5/152 (3%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+EL++HF Y EIE++ +K+ PNTGRSRGFAFIVFK ES++K V+A G H INNK
Sbjct: 57 KELRDHFGAYREIESINVKTVPNTGRSRGFAFIVFKAPESIDK-----VMAAGEHTINNK 111
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
K++ KKAKA+ GKIFVGGLS E+ D+EI+ F++FG I+E EMP+DK+K+QRK FCFITF
Sbjct: 112 KVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 171
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKATPKPE 265
E E VV DLLK PK+ I KEVDVK+ATPKP+
Sbjct: 172 ESEQVVNDLLKTPKRTIGGKEVDVKRATPKPD 203
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 39/55 (70%), Positives = 46/55 (83%)
Query: 445 IIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE 499
I+E EMP+DK+K+QRK FCFITFE E VV DLLK PK+ I KEVDVK+ATPKP+
Sbjct: 149 ILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATPKPD 203
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/43 (62%), Positives = 36/43 (83%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+EL++HF Y EIE++ +K+ PNTGRSRGFAFIVFK ES++K
Sbjct: 57 KELRDHFGAYREIESINVKTVPNTGRSRGFAFIVFKAPESIDK 99
Score = 46.6 bits (109), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 42/78 (53%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+FVGGLS E D+E++ HF + I + + + + F FI F+ + ++
Sbjct: 44 KLFVGGLSWETTDKELRDHFGAYREIESINVKTVPNTGRSRGFAFIVFKAPESIDKVMAA 103
Query: 246 PKQKINDKEVDVKKATPK 263
+ IN+K+VD KKA +
Sbjct: 104 GEHTINNKKVDPKKAKAR 121
>gi|1465873|dbj|BAA07211.1| Bmsqd-2 [Bombyx mori]
Length = 303
Score = 196 bits (498), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 96/152 (63%), Positives = 121/152 (79%), Gaps = 5/152 (3%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+EL++HF Y EIE++ +K+ PNTGRSRGFAFIVFK ES++K V+A G H INNK
Sbjct: 57 KELRDHFGAYREIESINVKTVPNTGRSRGFAFIVFKAPESIDK-----VMAAGEHTINNK 111
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
K++ KKAKA+ GKIFVGGLS E+ D+EI+ F++FG I+E EMP+DK+K+QRK FCFITF
Sbjct: 112 KVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 171
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKATPKPE 265
E E VV DLLK PK+ I KEVDVK+ATPKP+
Sbjct: 172 ESEQVVNDLLKTPKRTIGGKEVDVKRATPKPD 203
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/55 (70%), Positives = 46/55 (83%)
Query: 445 IIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE 499
I+E EMP+DK+K+QRK FCFITFE E VV DLLK PK+ I KEVDVK+ATPKP+
Sbjct: 149 ILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATPKPD 203
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/43 (62%), Positives = 36/43 (83%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+EL++HF Y EIE++ +K+ PNTGRSRGFAFIVFK ES++K
Sbjct: 57 KELRDHFGAYREIESINVKTVPNTGRSRGFAFIVFKAPESIDK 99
Score = 46.6 bits (109), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 42/78 (53%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+FVGGLS E D+E++ HF + I + + + + F FI F+ + ++
Sbjct: 44 KLFVGGLSWETTDKELRDHFGAYREIESINVKTVPNTGRSRGFAFIVFKAPESIDKVMAA 103
Query: 246 PKQKINDKEVDVKKATPK 263
+ IN+K+VD KKA +
Sbjct: 104 GEHTINNKKVDPKKAKAR 121
>gi|255710315|gb|ACU30977.1| RNA-binding protein musashi [Ochlerotatus triseriatus]
Length = 270
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 91/152 (59%), Positives = 118/152 (77%), Gaps = 5/152 (3%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++L+ HF +YGEIE+V +K+DP TGRSRGFAFI+FK ES++K V+A +H IN K
Sbjct: 19 QDLRNHFGQYGEIESVNIKTDPQTGRSRGFAFIIFKSPESIDK-----VVAFEDHTINGK 73
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
K++ KKAKA+ GK FVGGLSPE DEEIK F Q+GN++E E P+DK K+QRK FCFIT+
Sbjct: 74 KVDPKKAKARQGKTFVGGLSPETSDEEIKTFFEQYGNVVEMETPFDKMKNQRKGFCFITY 133
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKATPKPE 265
+ E+VV +LLK PKQ + KEVDVK+AT KP+
Sbjct: 134 DSEAVVTELLKTPKQMVGGKEVDVKRATAKPD 165
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/55 (60%), Positives = 44/55 (80%)
Query: 445 IIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE 499
++E E P+DK K+QRK FCFIT++ E+VV +LLK PKQ + KEVDVK+AT KP+
Sbjct: 111 VVEMETPFDKMKNQRKGFCFITYDSEAVVTELLKTPKQMVGGKEVDVKRATAKPD 165
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/44 (61%), Positives = 37/44 (84%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
++L+ HF +YGEIE+V +K+DP TGRSRGFAFI+FK ES++K
Sbjct: 19 QDLRNHFGQYGEIESVNIKTDPQTGRSRGFAFIIFKSPESIDKV 62
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 41/75 (54%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+FVGGLS E +++++ HF Q+G I + D + + F FI F+ + ++
Sbjct: 6 KLFVGGLSKETAEQDLRNHFGQYGEIESVNIKTDPQTGRSRGFAFIIFKSPESIDKVVAF 65
Query: 246 PKQKINDKEVDVKKA 260
IN K+VD KKA
Sbjct: 66 EDHTINGKKVDPKKA 80
>gi|389616410|gb|AFK91569.1| squid, partial [Drosophila madeirensis]
gi|389616412|gb|AFK91570.1| squid, partial [Drosophila subobscura]
gi|389616414|gb|AFK91571.1| squid, partial [Drosophila subobscura]
gi|389616416|gb|AFK91572.1| squid, partial [Drosophila subobscura]
gi|389616418|gb|AFK91573.1| squid, partial [Drosophila subobscura]
gi|389616420|gb|AFK91574.1| squid, partial [Drosophila subobscura]
gi|389616422|gb|AFK91575.1| squid, partial [Drosophila subobscura]
gi|389616424|gb|AFK91576.1| squid, partial [Drosophila subobscura]
gi|389616426|gb|AFK91577.1| squid, partial [Drosophila subobscura]
gi|389616428|gb|AFK91578.1| squid, partial [Drosophila subobscura]
gi|389616430|gb|AFK91579.1| squid, partial [Drosophila subobscura]
gi|389616432|gb|AFK91580.1| squid, partial [Drosophila subobscura]
gi|389616434|gb|AFK91581.1| squid, partial [Drosophila subobscura]
gi|389616436|gb|AFK91582.1| squid, partial [Drosophila subobscura]
gi|389616438|gb|AFK91583.1| squid, partial [Drosophila subobscura]
gi|389616440|gb|AFK91584.1| squid, partial [Drosophila subobscura]
gi|389616442|gb|AFK91585.1| squid, partial [Drosophila subobscura]
gi|389616444|gb|AFK91586.1| squid, partial [Drosophila subobscura]
gi|389616446|gb|AFK91587.1| squid, partial [Drosophila subobscura]
gi|389616448|gb|AFK91588.1| squid, partial [Drosophila subobscura]
gi|389616450|gb|AFK91589.1| squid, partial [Drosophila subobscura]
gi|389616452|gb|AFK91590.1| squid, partial [Drosophila subobscura]
gi|389616454|gb|AFK91591.1| squid, partial [Drosophila subobscura]
gi|389616456|gb|AFK91592.1| squid, partial [Drosophila subobscura]
gi|389616458|gb|AFK91593.1| squid, partial [Drosophila subobscura]
gi|389616460|gb|AFK91594.1| squid, partial [Drosophila subobscura]
gi|389616462|gb|AFK91595.1| squid, partial [Drosophila subobscura]
gi|389616464|gb|AFK91596.1| squid, partial [Drosophila subobscura]
gi|389616466|gb|AFK91597.1| squid, partial [Drosophila subobscura]
gi|389616468|gb|AFK91598.1| squid, partial [Drosophila subobscura]
gi|389616470|gb|AFK91599.1| squid, partial [Drosophila subobscura]
gi|389616472|gb|AFK91600.1| squid, partial [Drosophila subobscura]
gi|389616474|gb|AFK91601.1| squid, partial [Drosophila subobscura]
gi|389616476|gb|AFK91602.1| squid, partial [Drosophila subobscura]
Length = 161
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 91/135 (67%), Positives = 110/135 (81%), Gaps = 5/135 (3%)
Query: 131 LKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNKKIEAKKAKAKSGKIFVG 190
+K+DP TGRSRGFAFIVF +TE+++K S + HVIN+KK++ KKAKA+ GKIFVG
Sbjct: 1 VKTDPQTGRSRGFAFIVFTNTEAIDKVS-----SAEEHVINSKKVDPKKAKARHGKIFVG 55
Query: 191 GLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKI 250
GL+ E+ DEEIK +F QFGNI+E EMP+DK KSQRK FCFITF+ E VV DLLK PKQKI
Sbjct: 56 GLTTEISDEEIKTYFGQFGNIVEVEMPFDKQKSQRKGFCFITFDSEQVVTDLLKTPKQKI 115
Query: 251 NDKEVDVKKATPKPE 265
+ KEVDVK+ATPKPE
Sbjct: 116 SGKEVDVKRATPKPE 130
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/55 (76%), Positives = 47/55 (85%)
Query: 445 IIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE 499
I+E EMP+DK KSQRK FCFITF+ E VV DLLK PKQKI+ KEVDVK+ATPKPE
Sbjct: 76 IVEVEMPFDKQKSQRKGFCFITFDSEQVVTDLLKTPKQKISGKEVDVKRATPKPE 130
Score = 46.2 bits (108), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 19/28 (67%), Positives = 25/28 (89%)
Query: 625 LKSDPNTGRSRGFAFIVFKDTESLEKAS 652
+K+DP TGRSRGFAFIVF +TE+++K S
Sbjct: 1 VKTDPQTGRSRGFAFIVFTNTEAIDKVS 28
>gi|240848911|ref|NP_001155674.1| heterogeneous nuclear ribonucleoprotein-like [Acyrthosiphon pisum]
gi|239790977|dbj|BAH72014.1| ACYPI006706 [Acyrthosiphon pisum]
Length = 283
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 101/191 (52%), Positives = 125/191 (65%), Gaps = 9/191 (4%)
Query: 107 GIVHKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + TE ELKEHF +YGEI N++LK+DP TGRSRGFAFI+FK + L A A
Sbjct: 39 GLSWETTEKELKEHFVQYGEITNISLKTDPATGRSRGFAFIIFKSVDGLNNA-----FAA 93
Query: 166 GNHVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQR 225
G+HVIN KKI+ KKAKAK K+FVGGL ++ ++EIK F ++G I+ E+P+DK K+QR
Sbjct: 94 GDHVINGKKIDPKKAKAKQEKVFVGGLPSDVTNDEIKEFFGKWGVIVNLEVPFDKMKNQR 153
Query: 226 KNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKP-EPFGVRGGRGGRGGRGGRGG 284
K +CFIT+E V DL K KQ I KEVDVKKA PKP P+ GRG RG
Sbjct: 154 KGYCFITYESSDKVQDLFKTAKQTIKGKEVDVKKAAPKPANPYANPKAMRGRG--AARGA 211
Query: 285 RMAGGYGGYGG 295
GY YGG
Sbjct: 212 YPPQGYDYYGG 222
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/86 (50%), Positives = 50/86 (58%), Gaps = 3/86 (3%)
Query: 445 IIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKP-EPFGV 503
I+ E+P+DK K+QRK +CFIT+E V DL K KQ I KEVDVKKA PKP P+
Sbjct: 139 IVNLEVPFDKMKNQRKGYCFITYESSDKVQDLFKTAKQTIKGKEVDVKKAAPKPANPYAN 198
Query: 504 RGGRGGRGGRGGRGGRMAGGYGGYGG 529
GRG RG GY YGG
Sbjct: 199 PKAMRGRG--AARGAYPPQGYDYYGG 222
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/44 (65%), Positives = 36/44 (81%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
+ELKEHF +YGEI N++LK+DP TGRSRGFAFI+FK + L A
Sbjct: 47 KELKEHFVQYGEITNISLKTDPATGRSRGFAFIIFKSVDGLNNA 90
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 54/105 (51%), Gaps = 1/105 (0%)
Query: 167 NHVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRK 226
N+ ++ +E ++ K K+FVGGLS E ++E+K HF Q+G I + D + + +
Sbjct: 16 NNGVDQSNLE-EQVKEDDRKLFVGGLSWETTEKELKEHFVQYGEITNISLKTDPATGRSR 74
Query: 227 NFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGVRG 271
F FI F+ + + IN K++D KKA K E V G
Sbjct: 75 GFAFIIFKSVDGLNNAFAAGDHVINGKKIDPKKAKAKQEKVFVGG 119
>gi|350535755|ref|NP_001233020.1| uncharacterized protein LOC100167805 [Acyrthosiphon pisum]
gi|239788448|dbj|BAH70906.1| ACYPI008564 [Acyrthosiphon pisum]
Length = 290
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 89/170 (52%), Positives = 121/170 (71%), Gaps = 6/170 (3%)
Query: 107 GIVHKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + TE +L EHF ++GEIEN+ +K D TGR+RGFAFIV+K E L+ A +A
Sbjct: 55 GLKGETTEKDLSEHFGQFGEIENINVKVDAATGRARGFAFIVYKTMEGLDNA-----LAC 109
Query: 166 GNHVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQR 225
NHVIN+KKI+ KKAKA+ K+FVGGLSP++ D++IK +F ++ ++ EMPYDK K+QR
Sbjct: 110 TNHVINDKKIDPKKAKARHVKLFVGGLSPDLTDDDIKDYFKRYAPLVNAEMPYDKVKNQR 169
Query: 226 KNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGVRGGRGG 275
K FCF+TF+ V ++LK PK IN K+VDVKKA K EP+G+ G G
Sbjct: 170 KGFCFVTFDCMQAVTEILKTPKHVINGKQVDVKKAALKVEPYGMMPGASG 219
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 45/65 (69%)
Query: 445 IIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGVR 504
++ EMPYDK K+QRK FCF+TF+ V ++LK PK IN K+VDVKKA K EP+G+
Sbjct: 155 LVNAEMPYDKVKNQRKGFCFVTFDCMQAVTEILKTPKHVINGKQVDVKKAALKVEPYGMM 214
Query: 505 GGRGG 509
G G
Sbjct: 215 PGASG 219
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Query: 587 FYIVEAKNKMVSHPGIVDKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDT 645
F V ++ + G+ + TE +L EHF ++GEIEN+ +K D TGR+RGFAFIV+K
Sbjct: 41 FECVRDDDRKIFVGGLKGETTEKDLSEHFGQFGEIENINVKVDAATGRARGFAFIVYKTM 100
Query: 646 ESLEKA 651
E L+ A
Sbjct: 101 EGLDNA 106
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 48/97 (49%)
Query: 167 NHVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRK 226
N NN + + + KIFVGGL E ++++ HF QFG I + D + + +
Sbjct: 31 NSTTNNDSGQFECVRDDDRKIFVGGLKGETTEKDLSEHFGQFGEIENINVKVDAATGRAR 90
Query: 227 NFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
F FI ++ + + L INDK++D KKA +
Sbjct: 91 GFAFIVYKTMEGLDNALACTNHVINDKKIDPKKAKAR 127
>gi|193716167|ref|XP_001946745.1| PREDICTED: RNA-binding protein squid-like [Acyrthosiphon pisum]
Length = 290
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 89/186 (47%), Positives = 122/186 (65%), Gaps = 10/186 (5%)
Query: 107 GIVHKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ I+E EL+E+F++YGEIEN+ +K+DP +G+SRGFAF+ F + +V+D++A
Sbjct: 26 GLGRTISEKELREYFTQYGEIENINIKTDPFSGQSRGFAFVQF-----VNAKTVDDLLAA 80
Query: 166 GNHVINNKKIEAKKAKAKSG----KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKS 221
G+H I NKK++ K+ K KIFVGGL+ EM +++++ +F QFG I E + P+DK
Sbjct: 81 GDHFIANKKVDPKRVTKKVNPLRCKIFVGGLTTEMTEQDVRNYFVQFGQISEYQQPFDKM 140
Query: 222 KSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGVRGGRGGRGGRGG 281
K+Q+K FCFITFE VV +LKNPKQ IN KEVDVKK PE G R G
Sbjct: 141 KNQKKGFCFITFEDSEVVNQVLKNPKQVINGKEVDVKKVKFNPETMTAPGTRTGGPVGAT 200
Query: 282 RGGRMA 287
RGG A
Sbjct: 201 RGGAPA 206
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/78 (52%), Positives = 47/78 (60%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGV 503
+I E + P+DK K+Q+K FCFITFE VV +LKNPKQ IN KEVDVKK PE
Sbjct: 129 QISEYQQPFDKMKNQKKGFCFITFEDSEVVNQVLKNPKQVINGKEVDVKKVKFNPETMTA 188
Query: 504 RGGRGGRGGRGGRGGRMA 521
G R G RGG A
Sbjct: 189 PGTRTGGPVGATRGGAPA 206
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 41/54 (75%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFYSN 661
+EL+E+F++YGEIEN+ +K+DP +G+SRGFAF+ F + ++++ +F +N
Sbjct: 34 KELREYFTQYGEIENINIKTDPFSGQSRGFAFVQFVNAKTVDDLLAAGDHFIAN 87
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 43/82 (52%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+FVGGL + ++E++ +F Q+G I + D Q + F F+ F + V DLL
Sbjct: 21 KLFVGGLGRTISEKELREYFTQYGEIENINIKTDPFSGQSRGFAFVQFVNAKTVDDLLAA 80
Query: 246 PKQKINDKEVDVKKATPKPEPF 267
I +K+VD K+ T K P
Sbjct: 81 GDHFIANKKVDPKRVTKKVNPL 102
>gi|156548706|ref|XP_001603011.1| PREDICTED: RNA-binding protein squid-like [Nasonia vitripennis]
Length = 310
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 99/228 (43%), Positives = 144/228 (63%), Gaps = 10/228 (4%)
Query: 107 GIVHKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ TE ELK +F K+GEIE+V++K DP TG SRGFAF+VF++ ++++K ++A
Sbjct: 79 GLTRNTTEAELKAYFGKFGEIESVSIKMDPYTGVSRGFAFMVFQNPKAIDK-----LLAS 133
Query: 166 GNHVINNKKIEAKKA--KAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKS 223
G+H +N +K++ K+ KA+ GKIFVGGL+P++ DE+IK +F Q+G I+E + P+DK+K+
Sbjct: 134 GDHYVNKRKVDPKRVSKKAQHGKIFVGGLTPDITDEDIKTYFGQYGTIVEVQAPFDKTKN 193
Query: 224 QRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKA-TPKPEPFGVRGGRGGRGGRGGR 282
QR+++CF+TF+ + VV LLK PKQ IN KE+DVKK + + G G + G G GG
Sbjct: 194 QRRSYCFVTFDSKDVVYKLLKTPKQVINGKEIDVKKVKVNQDQRQGFWGPQYGGYGYGGG 253
Query: 283 GGRMAGGYG-GYGGYGGGYGGILYKPLLFYELNELGISGRSLVCRTGP 329
G Y GYGGY Y Y YE + G+ GP
Sbjct: 254 YGGYIPEYANGYGGYDDMYANYDYSGYDGYENMGYAMPGKPRNGPQGP 301
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/49 (57%), Positives = 40/49 (81%)
Query: 445 IIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKK 493
I+E + P+DK+K+QR+++CF+TF+ + VV LLK PKQ IN KE+DVKK
Sbjct: 181 IVEVQAPFDKTKNQRRSYCFVTFDSKDVVYKLLKTPKQVINGKEIDVKK 229
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 40/51 (78%), Gaps = 1/51 (1%)
Query: 601 GIVDKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
G+ TE ELK +F K+GEIE+V++K DP TG SRGFAF+VF++ ++++K
Sbjct: 79 GLTRNTTEAELKAYFGKFGEIESVSIKMDPYTGVSRGFAFMVFQNPKAIDK 129
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 50/102 (49%), Gaps = 3/102 (2%)
Query: 164 AEGNHVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKS 223
AEGN I K + K +FVGGL+ + E+KA+F +FG I + D
Sbjct: 55 AEGNKQQATAGIPGKDDERK---LFVGGLTRNTTEAELKAYFGKFGEIESVSIKMDPYTG 111
Query: 224 QRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE 265
+ F F+ F++ + LL + +N ++VD K+ + K +
Sbjct: 112 VSRGFAFMVFQNPKAIDKLLASGDHYVNKRKVDPKRVSKKAQ 153
Score = 39.7 bits (91), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 80/194 (41%), Gaps = 28/194 (14%)
Query: 6 QDVEMTTTENGQENGGAPVSVKDDDRKLFCPLSSYLELDYLQLWQYFDWVSSSFSENCLL 65
Q + E ++ A + KDD+RKLF + + +L YF S + +
Sbjct: 48 QGQQQQPAEGNKQQATAGIPGKDDERKLFVGGLTRNTTE-AELKAYFGKFGEIESVSIKM 106
Query: 66 EDSIGKPLTVSCSHHYYLF------DQILRTHFFYIMEAK------NKMVSH-----PGI 108
+ G VS + +F D++L + Y+ + K +K H G+
Sbjct: 107 DPYTG----VSRGFAFMVFQNPKAIDKLLASGDHYVNKRKVDPKRVSKKAQHGKIFVGGL 162
Query: 109 VHKIT-EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGN 167
IT E++K +F +YG I V D + R + F+ F + + K ++
Sbjct: 163 TPDITDEDIKTYFGQYGTIVEVQAPFDKTKNQRRSYCFVTFDSKDVVYK-----LLKTPK 217
Query: 168 HVINNKKIEAKKAK 181
VIN K+I+ KK K
Sbjct: 218 QVINGKEIDVKKVK 231
>gi|307173016|gb|EFN64158.1| RNA-binding protein squid [Camponotus floridanus]
Length = 288
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 84/155 (54%), Positives = 116/155 (74%), Gaps = 7/155 (4%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+EL EHFSK+GEIE++++K DP+TG SRGFAF+VF + ++++K ++A G H IN +
Sbjct: 68 KELHEHFSKFGEIESISVKVDPHTGVSRGFAFMVFANPKTIDK-----LLASGEHYINKR 122
Query: 174 KIEAKKA--KAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFI 231
K++ K+ K + GK+FVGGL+PE+ DE+IK HF Q+G I+E + P+DK K+QRK FCFI
Sbjct: 123 KVDPKRVSKKPQHGKVFVGGLTPEITDEDIKTHFGQYGTIVELQAPFDKVKNQRKGFCFI 182
Query: 232 TFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEP 266
TF+ + VV LLK PKQ IN KEVDVKK P+P
Sbjct: 183 TFDSKEVVYKLLKTPKQTINGKEVDVKKVKVNPDP 217
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/43 (58%), Positives = 38/43 (88%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+EL EHFSK+GEIE++++K DP+TG SRGFAF+VF + ++++K
Sbjct: 68 KELHEHFSKFGEIESISVKVDPHTGVSRGFAFMVFANPKTIDK 110
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 41/56 (73%)
Query: 445 IIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEP 500
I+E + P+DK K+QRK FCFITF+ + VV LLK PKQ IN KEVDVKK P+P
Sbjct: 162 IVELQAPFDKVKNQRKGFCFITFDSKEVVYKLLKTPKQTINGKEVDVKKVKVNPDP 217
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 44/80 (55%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+FVGGLS D+E+ HF++FG I + D + F F+ F + + LL +
Sbjct: 55 KLFVGGLSRSTTDKELHEHFSKFGEIESISVKVDPHTGVSRGFAFMVFANPKTIDKLLAS 114
Query: 246 PKQKINDKEVDVKKATPKPE 265
+ IN ++VD K+ + KP+
Sbjct: 115 GEHYINKRKVDPKRVSKKPQ 134
>gi|307206491|gb|EFN84517.1| RNA-binding protein squid [Harpegnathos saltator]
Length = 311
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 84/155 (54%), Positives = 117/155 (75%), Gaps = 7/155 (4%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+EL+EHFSK+GEIE++T+K DP+TG SRGFAF+VF + ++++K ++A G H IN +
Sbjct: 91 KELREHFSKFGEIESITVKIDPHTGISRGFAFMVFANAKAIDK-----LLASGEHYINKR 145
Query: 174 KIEAKKA--KAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFI 231
K++ K+ K + GKIFVGGL+PE+ D++IK +F Q+G I+E + P+DK K+QRK FCFI
Sbjct: 146 KVDPKRVSKKPQHGKIFVGGLTPEITDDDIKTYFGQYGTIVELQAPFDKVKNQRKGFCFI 205
Query: 232 TFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEP 266
TF+ + VV LLK PKQ IN KEVDVKK P+P
Sbjct: 206 TFDSKEVVYKLLKTPKQTINGKEVDVKKVKVNPDP 240
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 26/43 (60%), Positives = 39/43 (90%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+EL+EHFSK+GEIE++T+K DP+TG SRGFAF+VF + ++++K
Sbjct: 91 KELREHFSKFGEIESITVKIDPHTGISRGFAFMVFANAKAIDK 133
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 41/56 (73%)
Query: 445 IIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEP 500
I+E + P+DK K+QRK FCFITF+ + VV LLK PKQ IN KEVDVKK P+P
Sbjct: 185 IVELQAPFDKVKNQRKGFCFITFDSKEVVYKLLKTPKQTINGKEVDVKKVKVNPDP 240
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 45/80 (56%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+FVGGLS D+E++ HF++FG I + D + F F+ F + + LL +
Sbjct: 78 KLFVGGLSRNTTDKELREHFSKFGEIESITVKIDPHTGISRGFAFMVFANAKAIDKLLAS 137
Query: 246 PKQKINDKEVDVKKATPKPE 265
+ IN ++VD K+ + KP+
Sbjct: 138 GEHYINKRKVDPKRVSKKPQ 157
>gi|380026397|ref|XP_003696938.1| PREDICTED: RNA-binding protein squid-like [Apis florea]
Length = 314
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 84/155 (54%), Positives = 116/155 (74%), Gaps = 7/155 (4%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+EL++HFSK+GEIE++++K DP TG SRGFAF+VF + ++++K ++A G H IN +
Sbjct: 73 KELRDHFSKFGEIESISVKIDPYTGISRGFAFMVFTNPKTIDK-----LLASGEHYINKR 127
Query: 174 KIEAKKA--KAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFI 231
K++ K+ K + GKIFVGGL+PE+ DE+IK +F Q+G I+E + PYDK K+QRK FCFI
Sbjct: 128 KVDPKRVSKKPQHGKIFVGGLTPEITDEDIKTYFGQYGTIVELQAPYDKVKNQRKGFCFI 187
Query: 232 TFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEP 266
TF+ + VV LLK PKQ IN KEVDVKK P+P
Sbjct: 188 TFDSKEVVYKLLKTPKQTINGKEVDVKKVKVNPDP 222
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/56 (62%), Positives = 41/56 (73%)
Query: 445 IIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEP 500
I+E + PYDK K+QRK FCFITF+ + VV LLK PKQ IN KEVDVKK P+P
Sbjct: 167 IVELQAPYDKVKNQRKGFCFITFDSKEVVYKLLKTPKQTINGKEVDVKKVKVNPDP 222
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/43 (55%), Positives = 38/43 (88%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+EL++HFSK+GEIE++++K DP TG SRGFAF+VF + ++++K
Sbjct: 73 KELRDHFSKFGEIESISVKIDPYTGISRGFAFMVFTNPKTIDK 115
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 45/80 (56%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+FVGGLS D+E++ HF++FG I + D + F F+ F + + LL +
Sbjct: 60 KLFVGGLSRNTTDKELRDHFSKFGEIESISVKIDPYTGISRGFAFMVFTNPKTIDKLLAS 119
Query: 246 PKQKINDKEVDVKKATPKPE 265
+ IN ++VD K+ + KP+
Sbjct: 120 GEHYINKRKVDPKRVSKKPQ 139
>gi|328789356|ref|XP_001121454.2| PREDICTED: RNA-binding protein squid-like [Apis mellifera]
Length = 314
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 83/155 (53%), Positives = 116/155 (74%), Gaps = 7/155 (4%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+EL++HFSK+GEIE++++K DP TG SRGFAF+VF + ++++K ++A G H IN +
Sbjct: 73 KELRDHFSKFGEIESISVKIDPYTGISRGFAFMVFTNPKTIDK-----LLASGEHYINKR 127
Query: 174 KIEAKKA--KAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFI 231
K++ K+ K + GKIFVGGL+PE+ DE+IK +F Q+G I+E + P+DK K+QRK FCFI
Sbjct: 128 KVDPKRVSKKPQHGKIFVGGLTPEITDEDIKTYFGQYGTIVELQAPFDKVKNQRKGFCFI 187
Query: 232 TFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEP 266
TF+ + VV LLK PKQ IN KEVDVKK P+P
Sbjct: 188 TFDSKEVVYKLLKTPKQTINGKEVDVKKVKVNPDP 222
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 41/56 (73%)
Query: 445 IIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEP 500
I+E + P+DK K+QRK FCFITF+ + VV LLK PKQ IN KEVDVKK P+P
Sbjct: 167 IVELQAPFDKVKNQRKGFCFITFDSKEVVYKLLKTPKQTINGKEVDVKKVKVNPDP 222
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/43 (55%), Positives = 38/43 (88%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+EL++HFSK+GEIE++++K DP TG SRGFAF+VF + ++++K
Sbjct: 73 KELRDHFSKFGEIESISVKIDPYTGISRGFAFMVFTNPKTIDK 115
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 45/80 (56%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+FVGGLS D+E++ HF++FG I + D + F F+ F + + LL +
Sbjct: 60 KLFVGGLSRNTTDKELRDHFSKFGEIESISVKIDPYTGISRGFAFMVFTNPKTIDKLLAS 119
Query: 246 PKQKINDKEVDVKKATPKPE 265
+ IN ++VD K+ + KP+
Sbjct: 120 GEHYINKRKVDPKRVSKKPQ 139
>gi|318086976|gb|ADV40080.1| putative RNA-binding protein musashi [Latrodectus hesperus]
Length = 298
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 77/155 (49%), Positives = 108/155 (69%), Gaps = 7/155 (4%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++LKE+FSK+GE+ V +K+DP +GRSRGFAF+ F + SV+ V+ G H I K
Sbjct: 68 KDLKEYFSKFGEVTEVNIKTDPTSGRSRGFAFVAF-----ASRDSVDSVLHNGPHNIKGK 122
Query: 174 KIEAKKAKAKSG--KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFI 231
+IEAK+AK + G KIFVGG+ +M + +I+ +F +G + E+P+DK K+QR+ FCF+
Sbjct: 123 QIEAKRAKVRPGIKKIFVGGIESDMTEADIRNYFEHYGKVEAVELPFDKVKNQRRQFCFV 182
Query: 232 TFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEP 266
TFE E V + K PKQKI +KE DVKKAT KP+P
Sbjct: 183 TFEDEMTVDQVCKQPKQKIGNKECDVKKATTKPDP 217
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/52 (61%), Positives = 40/52 (76%)
Query: 449 EMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEP 500
E+P+DK K+QR+ FCF+TFE E V + K PKQKI +KE DVKKAT KP+P
Sbjct: 166 ELPFDKVKNQRRQFCFVTFEDEMTVDQVCKQPKQKIGNKECDVKKATTKPDP 217
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 34/42 (80%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLE 649
++LKE+FSK+GE+ V +K+DP +GRSRGFAF+ F +S++
Sbjct: 68 KDLKEYFSKFGEVTEVNIKTDPTSGRSRGFAFVAFASRDSVD 109
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 44/79 (55%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+F+GG+S E +++K +F++FG + E + D + + + F F+ F V +L N
Sbjct: 55 KLFIGGISRETNQKDLKEYFSKFGEVTEVNIKTDPTSGRSRGFAFVAFASRDSVDSVLHN 114
Query: 246 PKQKINDKEVDVKKATPKP 264
I K+++ K+A +P
Sbjct: 115 GPHNIKGKQIEAKRAKVRP 133
>gi|322783285|gb|EFZ10869.1| hypothetical protein SINV_13887 [Solenopsis invicta]
Length = 298
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 81/155 (52%), Positives = 118/155 (76%), Gaps = 7/155 (4%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+EL++HF K+GEIE++++K DP+TG SRGFAF+VF + ++++K ++A G H IN +
Sbjct: 79 KELRDHFGKFGEIESISVKVDPHTGVSRGFAFMVFTNPKTIDK-----LLASGEHYINKR 133
Query: 174 KIEAKKA--KAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFI 231
K++ K+ K + GKIFVGGL+PE+ D++IK++F+Q+G I+E + P+DK K+QRK FCFI
Sbjct: 134 KVDPKRVSKKPQHGKIFVGGLTPEITDDDIKSYFSQYGTIVELQAPFDKVKNQRKGFCFI 193
Query: 232 TFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEP 266
TF+ + VV LLK PKQ IN KEVDVKK P+P
Sbjct: 194 TFDSKEVVYKLLKTPKQTINGKEVDVKKVKVNPDP 228
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 41/56 (73%)
Query: 445 IIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEP 500
I+E + P+DK K+QRK FCFITF+ + VV LLK PKQ IN KEVDVKK P+P
Sbjct: 173 IVELQAPFDKVKNQRKGFCFITFDSKEVVYKLLKTPKQTINGKEVDVKKVKVNPDP 228
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 38/43 (88%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+EL++HF K+GEIE++++K DP+TG SRGFAF+VF + ++++K
Sbjct: 79 KELRDHFGKFGEIESISVKVDPHTGVSRGFAFMVFTNPKTIDK 121
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 44/80 (55%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+F+GGLS D+E++ HF +FG I + D + F F+ F + + LL +
Sbjct: 66 KLFIGGLSRNTTDKELRDHFGKFGEIESISVKVDPHTGVSRGFAFMVFTNPKTIDKLLAS 125
Query: 246 PKQKINDKEVDVKKATPKPE 265
+ IN ++VD K+ + KP+
Sbjct: 126 GEHYINKRKVDPKRVSKKPQ 145
>gi|332016239|gb|EGI57152.1| RNA-binding protein squid [Acromyrmex echinatior]
Length = 291
Score = 155 bits (393), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 81/155 (52%), Positives = 117/155 (75%), Gaps = 7/155 (4%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+EL++HF K+GEIE++++K DP+TG SRGFAF+VF + ++++K ++A G H IN +
Sbjct: 72 KELRDHFGKFGEIESISVKVDPHTGISRGFAFMVFTNPKTIDK-----LLASGEHYINKR 126
Query: 174 KIEAKKA--KAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFI 231
K++ K+ K + GKIFVGGL+PE+ D++IK +F+Q+G I+E + P+DK K+QRK FCFI
Sbjct: 127 KVDPKRVSKKPQHGKIFVGGLTPEISDDDIKNYFSQYGTIVELQAPFDKVKNQRKGFCFI 186
Query: 232 TFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEP 266
TF+ + VV LLK PKQ IN KEVDVKK P+P
Sbjct: 187 TFDSKEVVYKLLKTPKQTINGKEVDVKKVKVNPDP 221
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 41/56 (73%)
Query: 445 IIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEP 500
I+E + P+DK K+QRK FCFITF+ + VV LLK PKQ IN KEVDVKK P+P
Sbjct: 166 IVELQAPFDKVKNQRKGFCFITFDSKEVVYKLLKTPKQTINGKEVDVKKVKVNPDP 221
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 38/43 (88%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+EL++HF K+GEIE++++K DP+TG SRGFAF+VF + ++++K
Sbjct: 72 KELRDHFGKFGEIESISVKVDPHTGISRGFAFMVFTNPKTIDK 114
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 44/80 (55%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+F+GGLS D+E++ HF +FG I + D + F F+ F + + LL +
Sbjct: 59 KLFIGGLSRNTTDKELRDHFGKFGEIESISVKVDPHTGISRGFAFMVFTNPKTIDKLLAS 118
Query: 246 PKQKINDKEVDVKKATPKPE 265
+ IN ++VD K+ + KP+
Sbjct: 119 GEHYINKRKVDPKRVSKKPQ 138
>gi|225713050|gb|ACO12371.1| RNA-binding protein squid [Lepeophtheirus salmonis]
Length = 283
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 82/157 (52%), Positives = 111/157 (70%), Gaps = 6/157 (3%)
Query: 115 ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNKK 174
++KEHF +GEIE++ +K+DP TGRSRGFAF+VFK E LEKA V AE H + +KK
Sbjct: 39 DIKEHFEGFGEIESINIKTDPQTGRSRGFAFVVFKSLEGLEKA----VSAE--HTVKSKK 92
Query: 175 IEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFE 234
+ KKA+AK GK++VG L PE+ DE+IK HF+Q+G + E P+DK+K++RKNFCFITFE
Sbjct: 93 VAVKKAQAKQGKVYVGKLKPEISDEDIKTHFSQYGPVANVEQPFDKTKNERKNFCFITFE 152
Query: 235 HESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGVRG 271
E LLK + E+++KK TPKP+ G+ G
Sbjct: 153 KEEPAKKLLKEGTVTLKGAELEIKKVTPKPDIRGMVG 189
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 28/43 (65%), Positives = 36/43 (83%)
Query: 609 ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
++KEHF +GEIE++ +K+DP TGRSRGFAF+VFK E LEKA
Sbjct: 39 DIKEHFEGFGEIESINIKTDPQTGRSRGFAFVVFKSLEGLEKA 81
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 53/92 (57%), Gaps = 3/92 (3%)
Query: 445 IIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGVR 504
+ E P+DK+K++RKNFCFITFE E LLK + E+++KK TPKP+ +R
Sbjct: 129 VANVEQPFDKTKNERKNFCFITFEKEEPAKKLLKEGTVTLKGAELEIKKVTPKPD---IR 185
Query: 505 GGRGGRGGRGGRGGRMAGGYGGYGGYGGGYGE 536
G G GRG GG G + G +G GY +
Sbjct: 186 GMVGPVMGRGRGGGGAGGPWSACGSWGAGYND 217
Score = 43.1 bits (100), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Query: 165 EGNHVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQ 224
EGN + + +EA + K+FVGGL + KD +IK HF FG I + D +
Sbjct: 5 EGNAEVMDTSVEATNDEDDR-KLFVGGLPQDAKDCDIKEHFEGFGEIESINIKTDPQTGR 63
Query: 225 RKNFCFITFE 234
+ F F+ F+
Sbjct: 64 SRGFAFVVFK 73
Score = 38.9 bits (89), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 5/70 (7%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
E++K HFS+YG + NV D + F FI F+ E +K ++ EG +
Sbjct: 117 EDIKTHFSQYGPVANVEQPFDKTKNERKNFCFITFEKEEPAKK-----LLKEGTVTLKGA 171
Query: 174 KIEAKKAKAK 183
++E KK K
Sbjct: 172 ELEIKKVTPK 181
>gi|391328905|ref|XP_003738923.1| PREDICTED: RNA-binding protein squid-like [Metaseiulus
occidentalis]
Length = 299
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 80/172 (46%), Positives = 108/172 (62%), Gaps = 8/172 (4%)
Query: 95 IMEAKNKMVSHPGIVHKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTES 153
+A+++ + G+ T+ +L+ HF KYGEI+ T+K DP T +SRGF FI F
Sbjct: 39 TADAEDRKLFCGGLSFDTTDADLRSHFEKYGEIQECTVKMDPMTKKSRGFGFITFG---- 94
Query: 154 LEKASVEDVIAEGNHVINNKKIEAKKAKAKSG--KIFVGGLSPEMKDEEIKAHFAQFGNI 211
K +VED IA H I K+I+ K AKA+ G K+F GGL PE +EEI+ +F Q+GNI
Sbjct: 95 -SKQAVEDAIAGAPHTIKGKQIDPKAAKARPGAKKVFCGGLPPETTEEEIRTYFGQYGNI 153
Query: 212 IETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
E+P DK K+QR+ F F+T+E + +K PKQ IN KE DVKKATPK
Sbjct: 154 EALELPVDKEKNQRRGFIFVTYETTAAADAAVKKPKQTINGKECDVKKATPK 205
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 77/186 (41%), Positives = 99/186 (53%), Gaps = 40/186 (21%)
Query: 115 ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNKK 174
+L+ HF KYGEI+ T+K DP T +SRGF FI F K +VED IA H I K+
Sbjct: 60 DLRSHFEKYGEIQECTVKMDPMTKKSRGFGFITFG-----SKQAVEDAIAGAPHTIKGKQ 114
Query: 175 IEAKKAKAKSG--KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFIT 232
I+ K AKA+ G K+F GGL PE +EEI+ +F Q+GNI E+P DK K+QR+ F F+T
Sbjct: 115 IDPKAAKARPGAKKVFCGGLPPETTEEEIRTYFGQYGNIEALELPVDKEKNQRRGFIFVT 174
Query: 233 FEHESVVIDLLKNPKQKINDKEVDVKKATPKPE--------------------------- 265
+E + +K PKQ IN KE DVKKATPK +
Sbjct: 175 YETTAAADAAVKKPKQTINGKECDVKKATPKNDSWGGYGMRGGRGGRGGGRGGRGGYNQG 234
Query: 265 ------ 265
Sbjct: 235 GWGGYD 240
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 34/49 (69%)
Query: 449 EMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 497
E+P DK K+QR+ F F+T+E + +K PKQ IN KE DVKKATPK
Sbjct: 157 ELPVDKEKNQRRGFIFVTYETTAAADAAVKKPKQTINGKECDVKKATPK 205
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 58/117 (49%), Gaps = 5/117 (4%)
Query: 151 TESLEKASVEDVIAE---GNHVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQ 207
TES+E+ VED E G+ + A A+ K+F GGLS + D ++++HF +
Sbjct: 10 TESVEQ--VEDQKMEATNGDGTDGSNGTTTSTADAEDRKLFCGGLSFDTTDADLRSHFEK 67
Query: 208 FGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKP 264
+G I E + D + + F FITF + V D + I K++D K A +P
Sbjct: 68 YGEIQECTVKMDPMTKKSRGFGFITFGSKQAVEDAIAGAPHTIKGKQIDPKAAKARP 124
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 31/48 (64%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
D +L+ HF KYGEI+ T+K DP T +SRGF FI F +++E A
Sbjct: 55 DTTDADLRSHFEKYGEIQECTVKMDPMTKKSRGFGFITFGSKQAVEDA 102
>gi|390178416|ref|XP_003736645.1| GA14206, isoform D [Drosophila pseudoobscura pseudoobscura]
gi|388859440|gb|EIM52718.1| GA14206, isoform D [Drosophila pseudoobscura pseudoobscura]
Length = 193
Score = 148 bits (374), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 71/119 (59%), Positives = 96/119 (80%), Gaps = 6/119 (5%)
Query: 107 GIVHKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + TE EL++HF K+GEIE++ +K+DP TGRSRGFAFIVF +TE+++K S +
Sbjct: 61 GLSWETTEKELRDHFGKFGEIESINVKTDPQTGRSRGFAFIVFTNTEAIDKVS-----SA 115
Query: 166 GNHVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQ 224
G H+IN+KK++ KKAKA+ GKIFVGGL+ E+ DEEIK +F+QFGNI+E EMP+DK KSQ
Sbjct: 116 GEHIINSKKVDPKKAKARHGKIFVGGLTTEISDEEIKTYFSQFGNIVEVEMPFDKQKSQ 174
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 40/45 (88%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKAS 652
+EL++HF K+GEIE++ +K+DP TGRSRGFAFIVF +TE+++K S
Sbjct: 69 KELRDHFGKFGEIESINVKTDPQTGRSRGFAFIVFTNTEAIDKVS 113
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 42/78 (53%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+FVGGLS E ++E++ HF +FG I + D + + F FI F + + +
Sbjct: 56 KLFVGGLSWETTEKELRDHFGKFGEIESINVKTDPQTGRSRGFAFIVFTNTEAIDKVSSA 115
Query: 246 PKQKINDKEVDVKKATPK 263
+ IN K+VD KKA +
Sbjct: 116 GEHIINSKKVDPKKAKAR 133
>gi|241627626|ref|XP_002408070.1| RNA-binding protein musashi, putative [Ixodes scapularis]
gi|215501115|gb|EEC10609.1| RNA-binding protein musashi, putative [Ixodes scapularis]
Length = 353
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 72/155 (46%), Positives = 107/155 (69%), Gaps = 7/155 (4%)
Query: 113 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINN 172
++L+E+FSK+G + +V +K+DP TG+SRGF F+ F K ++E V+ H +
Sbjct: 74 NKDLREYFSKFGVVVDVNIKTDPTTGKSRGFGFVTF-----TAKEAIEAVLKATPHTVKG 128
Query: 173 KKIEAKKAKAKSG--KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCF 230
K+I+ K AKA+ G KIFVGGL +M + +IKA+F +FG + E+P+DK+K+QR+ F F
Sbjct: 129 KQIDPKPAKARPGIKKIFVGGLESDMPEADIKAYFEKFGPVENVELPFDKAKNQRRQFAF 188
Query: 231 ITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE 265
+TFE E V + + PKQKI +KE D+KKATPKP+
Sbjct: 189 VTFEREDSVELVCREPKQKIGNKECDIKKATPKPD 223
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/58 (53%), Positives = 44/58 (75%), Gaps = 2/58 (3%)
Query: 442 PMEIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE 499
P+E +E +P+DK+K+QR+ F F+TFE E V + + PKQKI +KE D+KKATPKP+
Sbjct: 168 PVENVE--LPFDKAKNQRRQFAFVTFEREDSVELVCREPKQKIGNKECDIKKATPKPD 223
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 58/122 (47%), Gaps = 9/122 (7%)
Query: 528 GGYGGGYGELDYLQLWQFFDWISSSFSENCLLEDSIGKPLTVSCSHYHYLFDQNLRTHYF 587
G G YGE D+ Q+ D+ F++ ++ G T + N
Sbjct: 4 GDQQGNYGEGDFSADGQYGDYNDGQFTDGQYQQEGDGNGQTNEVAQNGSDSKTN------ 57
Query: 588 YIVEAKNKMVSHPGIVDKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTES 647
E + K+ D ++L+E+FSK+G + +V +K+DP TG+SRGF F+ F E+
Sbjct: 58 ---EDERKLFVGGISWDTDNKDLREYFSKFGVVVDVNIKTDPTTGKSRGFGFVTFTAKEA 114
Query: 648 LE 649
+E
Sbjct: 115 IE 116
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 47/79 (59%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+FVGG+S + +++++ +F++FG +++ + D + + + F F+TF + + +LK
Sbjct: 62 KLFVGGISWDTDNKDLREYFSKFGVVVDVNIKTDPTTGKSRGFGFVTFTAKEAIEAVLKA 121
Query: 246 PKQKINDKEVDVKKATPKP 264
+ K++D K A +P
Sbjct: 122 TPHTVKGKQIDPKPAKARP 140
>gi|427777737|gb|JAA54320.1| Putative glycine rich protein [Rhipicephalus pulchellus]
Length = 355
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 72/155 (46%), Positives = 107/155 (69%), Gaps = 7/155 (4%)
Query: 113 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINN 172
++L+E+FSK+G + +V +K+DP TG+SRGF F+ F K ++E V+ H +
Sbjct: 74 NKDLREYFSKFGVVVDVNIKTDPTTGKSRGFGFVTFN-----AKDAIEAVLKATPHTVKG 128
Query: 173 KKIEAKKAKAKSG--KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCF 230
K+I+ K AKA+ G KIFVGGL +M + +IKA+F +FG + E+P+DK+K+QR+ F F
Sbjct: 129 KQIDPKPAKARPGIKKIFVGGLESDMPEADIKAYFEKFGPVENVELPFDKAKNQRRQFAF 188
Query: 231 ITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE 265
+TFE E V + + PKQKI +KE D+KKATPKP+
Sbjct: 189 VTFEREDSVELVCREPKQKIGNKECDIKKATPKPD 223
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/58 (53%), Positives = 44/58 (75%), Gaps = 2/58 (3%)
Query: 442 PMEIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE 499
P+E +E +P+DK+K+QR+ F F+TFE E V + + PKQKI +KE D+KKATPKP+
Sbjct: 168 PVENVE--LPFDKAKNQRRQFAFVTFEREDSVELVCREPKQKIGNKECDIKKATPKPD 223
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 60/122 (49%), Gaps = 9/122 (7%)
Query: 528 GGYGGGYGELDYLQLWQFFDWISSSFSENCLLEDSIGKPLTVSCSHYHYLFDQNLRTHYF 587
G G YGE D+ Q+ ++ F++ ++ T + + +T+
Sbjct: 4 GDQQGNYGEGDFSADGQYGEYNDGQFTDGQYQQEGEANAQTNEAAQNG----SDAKTN-- 57
Query: 588 YIVEAKNKMVSHPGIVDKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTES 647
E + K+ D ++L+E+FSK+G + +V +K+DP TG+SRGF F+ F ++
Sbjct: 58 ---EDERKLFVGGISWDTDNKDLREYFSKFGVVVDVNIKTDPTTGKSRGFGFVTFNAKDA 114
Query: 648 LE 649
+E
Sbjct: 115 IE 116
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 47/79 (59%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+FVGG+S + +++++ +F++FG +++ + D + + + F F+TF + + +LK
Sbjct: 62 KLFVGGISWDTDNKDLREYFSKFGVVVDVNIKTDPTTGKSRGFGFVTFNAKDAIEAVLKA 121
Query: 246 PKQKINDKEVDVKKATPKP 264
+ K++D K A +P
Sbjct: 122 TPHTVKGKQIDPKPAKARP 140
>gi|346466281|gb|AEO32985.1| hypothetical protein [Amblyomma maculatum]
Length = 321
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 72/154 (46%), Positives = 107/154 (69%), Gaps = 7/154 (4%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++L+E+FSK+G + +V +K+DP TG+SRGF F+ F K ++E V+ H + K
Sbjct: 46 KDLREYFSKFGVVVDVNIKTDPTTGKSRGFGFVTFN-----AKDAIEAVLKATPHTVKGK 100
Query: 174 KIEAKKAKAKSG--KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFI 231
+I+ K AKA+ G KIFVGGL +M + +IKA+F +FG + E+P+DK+K+QR+ F F+
Sbjct: 101 QIDPKPAKARPGIKKIFVGGLESDMPEADIKAYFEKFGPVENVELPFDKAKNQRRQFAFV 160
Query: 232 TFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE 265
TFE E V + + PKQKI +KE D+KKATPKP+
Sbjct: 161 TFEREDSVDLVCREPKQKIGNKECDIKKATPKPD 194
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/58 (53%), Positives = 44/58 (75%), Gaps = 2/58 (3%)
Query: 442 PMEIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE 499
P+E +E +P+DK+K+QR+ F F+TFE E V + + PKQKI +KE D+KKATPKP+
Sbjct: 139 PVENVE--LPFDKAKNQRRQFAFVTFEREDSVDLVCREPKQKIGNKECDIKKATPKPD 194
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 34/46 (73%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLE 649
D ++L+E+FSK+G + +V +K+DP TG+SRGF F+ F +++E
Sbjct: 42 DTDNKDLREYFSKFGVVVDVNIKTDPTTGKSRGFGFVTFNAKDAIE 87
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 47/79 (59%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+FVGG+S + +++++ +F++FG +++ + D + + + F F+TF + + +LK
Sbjct: 33 KLFVGGISWDTDNKDLREYFSKFGVVVDVNIKTDPTTGKSRGFGFVTFNAKDAIEAVLKA 92
Query: 246 PKQKINDKEVDVKKATPKP 264
+ K++D K A +P
Sbjct: 93 TPHTVKGKQIDPKPAKARP 111
>gi|242025582|ref|XP_002433203.1| RNA-binding protein squid, putative [Pediculus humanus corporis]
gi|212518744|gb|EEB20465.1| RNA-binding protein squid, putative [Pediculus humanus corporis]
Length = 272
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 72/171 (42%), Positives = 109/171 (63%), Gaps = 9/171 (5%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+EL E FSK+G IE++ +K DP T RGF FIVF D V+ +++ G+ +N K
Sbjct: 35 KELNETFSKFGTIESINIKKDPITKVPRGFCFIVFSDPNV-----VDQILSSGDICVNGK 89
Query: 174 KIEAKKAKAKS--GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFI 231
K++ ++ + GKIF+GGL+ + +E+IK HF+Q+G I + + P+D+ K+Q++ +CF+
Sbjct: 90 KVDPRRVTKTTPPGKIFIGGLTTDFTEEKIKEHFSQYGKITDVQWPFDRQKNQKRAYCFL 149
Query: 232 TFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGVRGGRGGR--GGRG 280
TFE+ V +LLK PKQ++ KE+DVKK PE GG G GGRG
Sbjct: 150 TFENRDTVTELLKTPKQEVLGKELDVKKVKLNPETMWQHGGAIGAYPGGRG 200
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 58/105 (55%), Gaps = 6/105 (5%)
Query: 416 VPMTTTEHMVLVTG--TDMMHMEVTEAVPM--EIIETEMPYDKSKSQRKNFCFITFEHES 471
V TT + + G TD ++ E +I + + P+D+ K+Q++ +CF+TFE+
Sbjct: 96 VTKTTPPGKIFIGGLTTDFTEEKIKEHFSQYGKITDVQWPFDRQKNQKRAYCFLTFENRD 155
Query: 472 VVIDLLKNPKQKINDKEVDVKKATPKPEPFGVRGGRGGR--GGRG 514
V +LLK PKQ++ KE+DVKK PE GG G GGRG
Sbjct: 156 TVTELLKTPKQEVLGKELDVKKVKLNPETMWQHGGAIGAYPGGRG 200
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 43/88 (48%)
Query: 179 KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESV 238
+ K K+FVGGL ++E+ F++FG I + D + FCFI F +V
Sbjct: 15 RGKDDDKKLFVGGLPKLCGEKELNETFSKFGTIESINIKKDPITKVPRGFCFIVFSDPNV 74
Query: 239 VIDLLKNPKQKINDKEVDVKKATPKPEP 266
V +L + +N K+VD ++ T P
Sbjct: 75 VDQILSSGDICVNGKKVDPRRVTKTTPP 102
Score = 47.0 bits (110), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 29/43 (67%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+EL E FSK+G IE++ +K DP T RGF FIVF D +++
Sbjct: 35 KELNETFSKFGTIESINIKKDPITKVPRGFCFIVFSDPNVVDQ 77
>gi|225712192|gb|ACO11942.1| RNA-binding protein squid [Lepeophtheirus salmonis]
Length = 268
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 90/199 (45%), Positives = 121/199 (60%), Gaps = 13/199 (6%)
Query: 107 GIVHKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + +E +LKE+F YG + + LK D TGRSRGFAF+VF ESLE + E
Sbjct: 23 GLPQEASENDLKEYFEAYGSVTSTVLKMDQMTGRSRGFAFVVFATPESLES------VLE 76
Query: 166 GNHVINNKKIEAKKAKAKSGKIFVGG-LSPEMKDEEIKAHFAQFGNIIETEMPYDKSK-S 223
HV+ KK+ KKA AK GK++VG L + +E+IK+HF+Q+G ++E + P D+SK S
Sbjct: 77 QEHVVKGKKVACKKATAKQGKVYVGKFLDGSITEEDIKSHFSQYGTVVEIQRPVDRSKNS 136
Query: 224 QRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGVRGGRGGRGGRGGRG 283
+ KNFCF+TF+ E LLK K +N +EV++KK T KPE GG G GGRG
Sbjct: 137 EPKNFCFVTFDKEDPAEKLLKEKKVTLNGQEVEIKKVTIKPELSRGGGGGGAGGGRGRNN 196
Query: 284 GRMAGGYGGYGGYGGGYGG 302
A GY +GGGY G
Sbjct: 197 APWA----GYDPWGGGYDG 211
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 445 IIETEMPYDKSK-SQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE 499
++E + P D+SK S+ KNFCF+TF+ E LLK K +N +EV++KK T KPE
Sbjct: 123 VVEIQRPVDRSKNSEPKNFCFVTFDKEDPAEKLLKEKKVTLNGQEVEIKKVTIKPE 178
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 24/41 (58%), Positives = 29/41 (70%)
Query: 609 ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLE 649
+LKE+F YG + + LK D TGRSRGFAF+VF ESLE
Sbjct: 32 DLKEYFEAYGSVTSTVLKMDQMTGRSRGFAFVVFATPESLE 72
Score = 44.3 bits (103), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+FVGGL E + ++K +F +G++ T + D+ + + F F+ F + +L+
Sbjct: 18 KLFVGGLPQEASENDLKEYFEAYGSVTSTVLKMDQMTGRSRGFAFVVFATPESLESVLEQ 77
Query: 246 PKQKINDKEVDVKKATPK 263
+ + K+V KKAT K
Sbjct: 78 -EHVVKGKKVACKKATAK 94
>gi|3747052|gb|AAC77437.1| estrogen response element binding protein [Saguinus oedipus]
Length = 358
Score = 139 bits (349), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 86/219 (39%), Positives = 126/219 (57%), Gaps = 15/219 (6%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++LK++FSK+GE+ + TLK DP TGRSRGF F++FK++ES++K V+ + H +N K
Sbjct: 111 KDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDK-----VMDQKEHKLNGK 165
Query: 174 KIEAKKAKAKS-----GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNF 228
I+ K+AKA KIFVGGLSP+ +E+I+ +F FG + E+P D ++R+ F
Sbjct: 166 VIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGF 225
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGVR--GGRGGRGGRG-GRGGR 285
CFITF+ E V +++ + + ++K A K + + G RGG GR GRGG
Sbjct: 226 CFITFKGEEPVKKIMEKKYHNVGLSKCEIKVAMSKEQYQQQQQWGSRGGFAGRARGRGGD 285
Query: 286 MAGGYGGYGGYGGGYGGILYKPLLFYELNELGISGRSLV 324
GYG GG YKP L Y + L +G V
Sbjct: 286 QQSGYGKVSRRGGHQNS--YKPYLNYSICNLSPTGGEAV 322
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 39/47 (82%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D ++LK++FSK+GE+ + TLK DP TGRSRGF F++FK++ES++K
Sbjct: 107 DTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDK 153
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 54/96 (56%)
Query: 165 EGNHVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQ 224
EG+ + + EA A+ + K+F+GGLS + +++K +F++FG +++ + D +
Sbjct: 77 EGHSNSSPRHTEAATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGR 136
Query: 225 RKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKA 260
+ F F+ F+ V ++ + K+N K +D K+A
Sbjct: 137 SRGFGFVLFKESESVDKVMDQKEHKLNGKVIDPKRA 172
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 46/92 (50%), Gaps = 3/92 (3%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGV 503
E+ E+P D ++R+ FCFITF+ E V +++ + + ++K A K +
Sbjct: 207 EVESIELPMDNKTNKRRGFCFITFKGEEPVKKIMEKKYHNVGLSKCEIKVAMSKEQYQQQ 266
Query: 504 R--GGRGGRGGRG-GRGGRMAGGYGGYGGYGG 532
+ G RGG GR GRGG GYG GG
Sbjct: 267 QQWGSRGGFAGRARGRGGDQQSGYGKVSRRGG 298
Score = 43.1 bits (100), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 30/47 (63%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D E+++E+F +GE+E++ L D T + RGF FI FK E ++K
Sbjct: 192 DTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKGEEPVKK 238
>gi|181914|gb|AAA35781.1| DNA-binding protein [Homo sapiens]
Length = 328
Score = 137 bits (344), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 85/219 (38%), Positives = 125/219 (57%), Gaps = 15/219 (6%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++LK++FSK+GE+ + TLK DP TGRSRGF F++FK++ES++K V+ + H +N K
Sbjct: 90 KDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDK-----VMDQKEHKLNGK 144
Query: 174 KIEAKKAKAKS-----GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNF 228
I+ K+AKA KIFVGGLSP+ +E+I+ +F FG + E+P D ++R+
Sbjct: 145 VIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGL 204
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGVR--GGRGGRGGRG-GRGGR 285
CFITF+ E V +++ + + ++K A K + + G RGG GR GRGG
Sbjct: 205 CFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSKEQYQQQQQWGSRGGFAGRARGRGGD 264
Query: 286 MAGGYGGYGGYGGGYGGILYKPLLFYELNELGISGRSLV 324
GYG GG YKP L Y + L +G V
Sbjct: 265 QQSGYGKVSRAGGHQNS--YKPYLNYSICNLSPTGGEAV 301
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 39/47 (82%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D ++LK++FSK+GE+ + TLK DP TGRSRGF F++FK++ES++K
Sbjct: 86 DTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDK 132
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 54/96 (56%)
Query: 165 EGNHVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQ 224
EG+ + + EA A+ + K+F+GGLS + +++K +F++FG +++ + D +
Sbjct: 56 EGHSNSSPRHSEAATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGR 115
Query: 225 RKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKA 260
+ F F+ F+ V ++ + K+N K +D K+A
Sbjct: 116 SRGFGFVLFKESESVDKVMDQKEHKLNGKVIDPKRA 151
Score = 47.4 bits (111), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 45/92 (48%), Gaps = 3/92 (3%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGV 503
E+ E+P D ++R+ CFITF+ E V +++ + + ++K A K +
Sbjct: 186 EVESIELPMDNKTNKRRGLCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSKEQYQQQ 245
Query: 504 R--GGRGGRGGRG-GRGGRMAGGYGGYGGYGG 532
+ G RGG GR GRGG GYG GG
Sbjct: 246 QQWGSRGGFAGRARGRGGDQQSGYGKVSRAGG 277
Score = 42.4 bits (98), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 30/47 (63%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D E+++E+F +GE+E++ L D T + RG FI FK+ E ++K
Sbjct: 171 DTPEEKIREYFGGFGEVESIELPMDNKTNKRRGLCFITFKEEEPVKK 217
>gi|170585852|ref|XP_001897696.1| RNA recognition motif containing protein [Brugia malayi]
gi|312066609|ref|XP_003136351.1| RNA recognition domain-containing protein containing protein [Loa
loa]
gi|158595003|gb|EDP33580.1| RNA recognition motif containing protein, putative [Brugia malayi]
gi|307768478|gb|EFO27712.1| RNA recognition domain-containing protein containing protein [Loa
loa]
gi|402585724|gb|EJW79663.1| RNA-binding protein [Wuchereria bancrofti]
Length = 300
Score = 133 bits (334), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 81/200 (40%), Positives = 113/200 (56%), Gaps = 9/200 (4%)
Query: 99 KNKMVSHPGIVHKIT-EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 157
++K + GI + +T E+L ++FS+YGE+ +K D NTGRSRGFAF+ F E+ A
Sbjct: 36 EDKKIFVGGIAYDVTNEDLSQYFSQYGEVAQAQVKYDRNTGRSRGFAFVEFTTGEACRAA 95
Query: 158 SVEDVIAEGNHVINNKKIEAKKAKAKSGK-IFVGGLSPEMKDEEIKAHFAQFGNIIETEM 216
+ + K +E K AK++ K +FVGGL + +EE++AHF Q+G + + E
Sbjct: 96 -----LNAREQSLKGKTVEVKPAKSRENKKVFVGGLPADHPEEELRAHFEQYGKVEDIEW 150
Query: 217 PYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPF-GVRGGRGG 275
P+DK R+NF FI FE E PKQ +E DVKKA P+ + F G RGG
Sbjct: 151 PFDKQTKARRNFAFIVFEEEEAAERASATPKQMFGSRECDVKKAVPQGKRFPGGRGGAAM 210
Query: 276 RGGRG-GRGGRMAGGYGGYG 294
R G G GR G M G +G G
Sbjct: 211 RAGYGAGRAGVMNGWFGQAG 230
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 46/87 (52%), Gaps = 2/87 (2%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPF-G 502
++ + E P+DK R+NF FI FE E PKQ +E DVKKA P+ + F G
Sbjct: 144 KVEDIEWPFDKQTKARRNFAFIVFEEEEAAERASATPKQMFGSRECDVKKAVPQGKRFPG 203
Query: 503 VRGGRGGRGGRG-GRGGRMAGGYGGYG 528
RGG R G G GR G M G +G G
Sbjct: 204 GRGGAAMRAGYGAGRAGVMNGWFGQAG 230
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 31/48 (64%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
D E+L ++FS+YGE+ +K D NTGRSRGFAF+ F E+ A
Sbjct: 48 DVTNEDLSQYFSQYGEVAQAQVKYDRNTGRSRGFAFVEFTTGEACRAA 95
Score = 42.7 bits (99), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 39/77 (50%), Gaps = 4/77 (5%)
Query: 570 SCSHYHYLFDQNLRTHYFYIVEAK---NKMVSHPGI-VDKITEELKEHFSKYGEIENVTL 625
+C +Q+L+ + AK NK V G+ D EEL+ HF +YG++E++
Sbjct: 91 ACRAALNAREQSLKGKTVEVKPAKSRENKKVFVGGLPADHPEEELRAHFEQYGKVEDIEW 150
Query: 626 KSDPNTGRSRGFAFIVF 642
D T R FAFIVF
Sbjct: 151 PFDKQTKARRNFAFIVF 167
>gi|291243919|ref|XP_002741849.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like
[Saccoglossus kowalevskii]
Length = 415
Score = 133 bits (334), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 67/155 (43%), Positives = 101/155 (65%), Gaps = 10/155 (6%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++LKE+F K+G + + T+K DP TGRSRGF F++F D ASVE V+ H ++ +
Sbjct: 97 KDLKEYFKKFGPVVDCTIKIDPVTGRSRGFGFVLFAD-----GASVEKVLQPQEHKLDGR 151
Query: 174 KIEAKKAKAKSG-----KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNF 228
I+ K+AKA+ G KIFVGGL+PE + E++ +F +FG I E E+P D++ ++R+ F
Sbjct: 152 IIDPKRAKARGGQPPITKIFVGGLNPEYPENELRDYFTKFGAIKEVELPIDRATNKRRGF 211
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
CFI FE E V ++ K + + + +VKKATPK
Sbjct: 212 CFIEFEKEDSVEEICKQQFHLLGNNKCEVKKATPK 246
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 33/43 (76%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
++LKE+F K+G + + T+K DP TGRSRGF F++F D S+EK
Sbjct: 97 KDLKEYFKKFGPVVDCTIKIDPVTGRSRGFGFVLFADGASVEK 139
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 51/88 (57%)
Query: 173 KKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFIT 232
++I A K + GK+FVGGLS E +++K +F +FG +++ + D + + F F+
Sbjct: 71 ERINASKNQDDDGKLFVGGLSWETTQKDLKEYFKKFGPVVDCTIKIDPVTGRSRGFGFVL 130
Query: 233 FEHESVVIDLLKNPKQKINDKEVDVKKA 260
F + V +L+ + K++ + +D K+A
Sbjct: 131 FADGASVEKVLQPQEHKLDGRIIDPKRA 158
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 34/53 (64%)
Query: 445 IIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 497
I E E+P D++ ++R+ FCFI FE E V ++ K + + + +VKKATPK
Sbjct: 194 IKEVELPIDRATNKRRGFCFIEFEKEDSVEEICKQQFHLLGNNKCEVKKATPK 246
Score = 42.0 bits (97), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 32/53 (60%)
Query: 609 ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFYSN 661
EL+++F+K+G I+ V L D T + RGF FI F+ +S+E+ + + N
Sbjct: 183 ELRDYFTKFGAIKEVELPIDRATNKRRGFCFIEFEKEDSVEEICKQQFHLLGN 235
>gi|14110414|ref|NP_002129.2| heterogeneous nuclear ribonucleoprotein D0 isoform c [Homo sapiens]
gi|114594009|ref|XP_001143722.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 2
[Pan troglodytes]
gi|395735083|ref|XP_003776519.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 2
[Pongo abelii]
gi|402869389|ref|XP_003898745.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 1
[Papio anubis]
gi|870745|dbj|BAA09523.1| heterogeneous nuclear ribonucleoprotein D (hnRNP D) [Homo sapiens]
gi|2815613|gb|AAC23475.1| heterogeneous nuclear ribonucleoprotein D [Homo sapiens]
gi|18645125|gb|AAH23977.1| Heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa) [Homo sapiens]
gi|19683928|gb|AAH26015.1| Heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa) [Homo sapiens]
gi|119626282|gb|EAX05877.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa), isoform CRA_e [Homo sapiens]
gi|119626286|gb|EAX05881.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa), isoform CRA_e [Homo sapiens]
gi|119626287|gb|EAX05882.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa), isoform CRA_e [Homo sapiens]
gi|208966456|dbj|BAG73242.1| heterogeneous nuclear ribonucleoprotein D [synthetic construct]
gi|380783617|gb|AFE63684.1| heterogeneous nuclear ribonucleoprotein D0 isoform c [Macaca
mulatta]
gi|383417963|gb|AFH32195.1| heterogeneous nuclear ribonucleoprotein D0 isoform c [Macaca
mulatta]
gi|384940050|gb|AFI33630.1| heterogeneous nuclear ribonucleoprotein D0 isoform c [Macaca
mulatta]
gi|410265342|gb|JAA20637.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa) [Pan troglodytes]
gi|410292488|gb|JAA24844.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa) [Pan troglodytes]
Length = 306
Score = 132 bits (332), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 81/204 (39%), Positives = 119/204 (58%), Gaps = 19/204 (9%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++LK++FSK+GE+ + TLK DP TGRSRGF F++FK++ES++K V+ + H +N K
Sbjct: 111 KDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDK-----VMDQKEHKLNGK 165
Query: 174 KIEAKKAKAKS-----GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNF 228
I+ K+AKA KIFVGGLSP+ +E+I+ +F FG + E+P D ++R+ F
Sbjct: 166 VIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGF 225
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKP-----EPFGVRGGRGGRGGRGGRG 283
CFITF+ E V +++ + + ++K A K + +G RGG GR GRG
Sbjct: 226 CFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSKEQYQQQQQWGSRGGFAGRA--RGRG 283
Query: 284 GRMAGGYGGYGGYGGGYGGILYKP 307
G GYG GG YKP
Sbjct: 284 GDQQSGYGKVSRRGGHQNS--YKP 305
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 39/47 (82%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D ++LK++FSK+GE+ + TLK DP TGRSRGF F++FK++ES++K
Sbjct: 107 DTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDK 153
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 54/96 (56%)
Query: 165 EGNHVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQ 224
EG+ + + EA A+ + K+F+GGLS + +++K +F++FG +++ + D +
Sbjct: 77 EGHSNSSPRHSEAATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGR 136
Query: 225 RKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKA 260
+ F F+ F+ V ++ + K+N K +D K+A
Sbjct: 137 SRGFGFVLFKESESVDKVMDQKEHKLNGKVIDPKRA 172
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 46/94 (48%), Gaps = 7/94 (7%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKP----- 498
E+ E+P D ++R+ FCFITF+ E V +++ + + ++K A K
Sbjct: 207 EVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSKEQYQQQ 266
Query: 499 EPFGVRGGRGGRGGRGGRGGRMAGGYGGYGGYGG 532
+ +G RGG GR GRGG GYG GG
Sbjct: 267 QQWGSRGGFAGRA--RGRGGDQQSGYGKVSRRGG 298
Score = 43.9 bits (102), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D E+++E+F +GE+E++ L D T + RGF FI FK+ E ++K
Sbjct: 192 DTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 238
>gi|410351151|gb|JAA42179.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa) [Pan troglodytes]
Length = 307
Score = 132 bits (332), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 81/204 (39%), Positives = 119/204 (58%), Gaps = 19/204 (9%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++LK++FSK+GE+ + TLK DP TGRSRGF F++FK++ES++K V+ + H +N K
Sbjct: 112 KDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDK-----VMDQKEHKLNGK 166
Query: 174 KIEAKKAKAKS-----GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNF 228
I+ K+AKA KIFVGGLSP+ +E+I+ +F FG + E+P D ++R+ F
Sbjct: 167 VIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGF 226
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKP-----EPFGVRGGRGGRGGRGGRG 283
CFITF+ E V +++ + + ++K A K + +G RGG GR GRG
Sbjct: 227 CFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSKEQYQQQQQWGSRGGFAGRA--RGRG 284
Query: 284 GRMAGGYGGYGGYGGGYGGILYKP 307
G GYG GG YKP
Sbjct: 285 GDQQSGYGKVSRRGGHQNS--YKP 306
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 39/47 (82%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D ++LK++FSK+GE+ + TLK DP TGRSRGF F++FK++ES++K
Sbjct: 108 DTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDK 154
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 54/96 (56%)
Query: 165 EGNHVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQ 224
EG+ + + EA A+ + K+F+GGLS + +++K +F++FG +++ + D +
Sbjct: 78 EGHSNSSPRHSEAATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGR 137
Query: 225 RKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKA 260
+ F F+ F+ V ++ + K+N K +D K+A
Sbjct: 138 SRGFGFVLFKESESVDKVMDQKEHKLNGKVIDPKRA 173
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 46/94 (48%), Gaps = 7/94 (7%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKP----- 498
E+ E+P D ++R+ FCFITF+ E V +++ + + ++K A K
Sbjct: 208 EVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSKEQYQQQ 267
Query: 499 EPFGVRGGRGGRGGRGGRGGRMAGGYGGYGGYGG 532
+ +G RGG GR GRGG GYG GG
Sbjct: 268 QQWGSRGGFAGRA--RGRGGDQQSGYGKVSRRGG 299
Score = 43.9 bits (102), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D E+++E+F +GE+E++ L D T + RGF FI FK+ E ++K
Sbjct: 193 DTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 239
>gi|119626284|gb|EAX05879.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa), isoform CRA_f [Homo sapiens]
Length = 277
Score = 132 bits (331), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 81/204 (39%), Positives = 119/204 (58%), Gaps = 19/204 (9%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++LK++FSK+GE+ + TLK DP TGRSRGF F++FK++ES++K V+ + H +N K
Sbjct: 82 KDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDK-----VMDQKEHKLNGK 136
Query: 174 KIEAKKAKAKS-----GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNF 228
I+ K+AKA KIFVGGLSP+ +E+I+ +F FG + E+P D ++R+ F
Sbjct: 137 VIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGF 196
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKP-----EPFGVRGGRGGRGGRGGRG 283
CFITF+ E V +++ + + ++K A K + +G RGG GR GRG
Sbjct: 197 CFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSKEQYQQQQQWGSRGGFAGRA--RGRG 254
Query: 284 GRMAGGYGGYGGYGGGYGGILYKP 307
G GYG GG YKP
Sbjct: 255 GDQQSGYGKVSRRGGHQNS--YKP 276
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 39/47 (82%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D ++LK++FSK+GE+ + TLK DP TGRSRGF F++FK++ES++K
Sbjct: 78 DTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDK 124
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 54/96 (56%)
Query: 165 EGNHVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQ 224
EG+ + + EA A+ + K+F+GGLS + +++K +F++FG +++ + D +
Sbjct: 48 EGHSNSSPRHSEAATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGR 107
Query: 225 RKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKA 260
+ F F+ F+ V ++ + K+N K +D K+A
Sbjct: 108 SRGFGFVLFKESESVDKVMDQKEHKLNGKVIDPKRA 143
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 46/94 (48%), Gaps = 7/94 (7%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKP----- 498
E+ E+P D ++R+ FCFITF+ E V +++ + + ++K A K
Sbjct: 178 EVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSKEQYQQQ 237
Query: 499 EPFGVRGGRGGRGGRGGRGGRMAGGYGGYGGYGG 532
+ +G RGG GR GRGG GYG GG
Sbjct: 238 QQWGSRGGFAGRA--RGRGGDQQSGYGKVSRRGG 269
Score = 43.9 bits (102), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D E+++E+F +GE+E++ L D T + RGF FI FK+ E ++K
Sbjct: 163 DTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 209
>gi|148230364|ref|NP_001091533.1| heterogeneous nuclear ribonucleoprotein D0 [Bos taurus]
gi|146231918|gb|ABQ13034.1| heterogeneous nuclear ribonucleoprotein D [Bos taurus]
gi|296486390|tpg|DAA28503.1| TPA: heterogeneous nuclear ribonucleoprotein D [Bos taurus]
Length = 306
Score = 132 bits (331), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 81/204 (39%), Positives = 119/204 (58%), Gaps = 19/204 (9%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++LK++FSK+GE+ + TLK DP TGRSRGF F++FK++ES++K V+ + H +N K
Sbjct: 111 KDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDK-----VMDQKEHKLNGK 165
Query: 174 KIEAKKAKAKS-----GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNF 228
I+ K+AKA KIFVGGLSP+ +E+I+ +F FG + E+P D ++R+ F
Sbjct: 166 VIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGF 225
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKP-----EPFGVRGGRGGRGGRGGRG 283
CFITF+ E V +++ + + ++K A K + +G RGG GR GRG
Sbjct: 226 CFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSKEQYQQQQQWGSRGGFAGRA--RGRG 283
Query: 284 GRMAGGYGGYGGYGGGYGGILYKP 307
G GYG GG YKP
Sbjct: 284 GDQQSGYGKVSRRGGHQNS--YKP 305
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 39/47 (82%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D ++LK++FSK+GE+ + TLK DP TGRSRGF F++FK++ES++K
Sbjct: 107 DTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDK 153
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 54/96 (56%)
Query: 165 EGNHVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQ 224
EG+ + + EA A+ + K+F+GGLS + +++K +F++FG +++ + D +
Sbjct: 77 EGHSNSSPRHSEAATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGR 136
Query: 225 RKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKA 260
+ F F+ F+ V ++ + K+N K +D K+A
Sbjct: 137 SRGFGFVLFKESESVDKVMDQKEHKLNGKVIDPKRA 172
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 46/94 (48%), Gaps = 7/94 (7%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKP----- 498
E+ E+P D ++R+ FCFITF+ E V +++ + + ++K A K
Sbjct: 207 EVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSKEQYQQQ 266
Query: 499 EPFGVRGGRGGRGGRGGRGGRMAGGYGGYGGYGG 532
+ +G RGG GR GRGG GYG GG
Sbjct: 267 QQWGSRGGFAGRA--RGRGGDQQSGYGKVSRRGG 298
Score = 43.9 bits (102), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D E+++E+F +GE+E++ L D T + RGF FI FK+ E ++K
Sbjct: 192 DTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 238
>gi|395834191|ref|XP_003790095.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 1
[Otolemur garnettii]
Length = 306
Score = 132 bits (331), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 81/204 (39%), Positives = 119/204 (58%), Gaps = 19/204 (9%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++LK++FSK+GE+ + TLK DP TGRSRGF F++FK++ES++K V+ + H +N K
Sbjct: 111 KDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDK-----VMDQKEHKLNGK 165
Query: 174 KIEAKKAKAKS-----GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNF 228
I+ K+AKA KIFVGGLSP+ +E+I+ +F FG + E+P D ++R+ F
Sbjct: 166 VIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGF 225
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKP-----EPFGVRGGRGGRGGRGGRG 283
CFITF+ E V +++ + + ++K A K + +G RGG GR GRG
Sbjct: 226 CFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSKEQYQQQQQWGSRGGFAGRA--RGRG 283
Query: 284 GRMAGGYGGYGGYGGGYGGILYKP 307
G GYG GG YKP
Sbjct: 284 GDQQSGYGKVSRRGGHQNS--YKP 305
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 39/47 (82%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D ++LK++FSK+GE+ + TLK DP TGRSRGF F++FK++ES++K
Sbjct: 107 DTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDK 153
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 54/96 (56%)
Query: 165 EGNHVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQ 224
EG+ + + EA A+ + K+F+GGLS + +++K +F++FG +++ + D +
Sbjct: 77 EGHSNSSPRHSEAATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGR 136
Query: 225 RKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKA 260
+ F F+ F+ V ++ + K+N K +D K+A
Sbjct: 137 SRGFGFVLFKESESVDKVMDQKEHKLNGKVIDPKRA 172
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 46/94 (48%), Gaps = 7/94 (7%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKP----- 498
E+ E+P D ++R+ FCFITF+ E V +++ + + ++K A K
Sbjct: 207 EVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSKEQYQQQ 266
Query: 499 EPFGVRGGRGGRGGRGGRGGRMAGGYGGYGGYGG 532
+ +G RGG GR GRGG GYG GG
Sbjct: 267 QQWGSRGGFAGRA--RGRGGDQQSGYGKVSRRGG 298
Score = 43.9 bits (102), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D E+++E+F +GE+E++ L D T + RGF FI FK+ E ++K
Sbjct: 192 DTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 238
>gi|2773158|gb|AAB96683.1| heterogeneous nuclear ribonucleoprotein D0B [Homo sapiens]
Length = 298
Score = 132 bits (331), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 81/204 (39%), Positives = 119/204 (58%), Gaps = 19/204 (9%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++LK++FSK+GE+ + TLK DP TGRSRGF F++FK++ES++K V+ + H +N K
Sbjct: 103 KDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDK-----VMDQKEHKLNGK 157
Query: 174 KIEAKKAKAKS-----GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNF 228
I+ K+AKA KIFVGGLSP+ +E+I+ +F FG + E+P D ++R+ F
Sbjct: 158 VIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGF 217
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKP-----EPFGVRGGRGGRGGRGGRG 283
CFITF+ E V +++ + + ++K A K + +G RGG GR GRG
Sbjct: 218 CFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSKEQYQQQQQWGSRGGFAGRA--RGRG 275
Query: 284 GRMAGGYGGYGGYGGGYGGILYKP 307
G GYG GG YKP
Sbjct: 276 GDQQSGYGKVSRRGGHQNS--YKP 297
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 39/47 (82%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D ++LK++FSK+GE+ + TLK DP TGRSRGF F++FK++ES++K
Sbjct: 99 DTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDK 145
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 54/96 (56%)
Query: 165 EGNHVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQ 224
EG+ + + EA A+ + K+F+GGLS + +++K +F++FG +++ + D +
Sbjct: 69 EGHSNSSPRHSEAATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGR 128
Query: 225 RKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKA 260
+ F F+ F+ V ++ + K+N K +D K+A
Sbjct: 129 SRGFGFVLFKESESVDKVMDQKEHKLNGKVIDPKRA 164
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 46/94 (48%), Gaps = 7/94 (7%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKP----- 498
E+ E+P D ++R+ FCFITF+ E V +++ + + ++K A K
Sbjct: 199 EVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSKEQYQQQ 258
Query: 499 EPFGVRGGRGGRGGRGGRGGRMAGGYGGYGGYGG 532
+ +G RGG GR GRGG GYG GG
Sbjct: 259 QQWGSRGGFAGRA--RGRGGDQQSGYGKVSRRGG 290
Score = 43.9 bits (102), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D E+++E+F +GE+E++ L D T + RGF FI FK+ E ++K
Sbjct: 184 DTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 230
>gi|870747|dbj|BAA09524.1| heterogeneous nuclear ribonucleoprotein D (hnRNP D) [Homo sapiens]
Length = 215
Score = 132 bits (331), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 78/195 (40%), Positives = 116/195 (59%), Gaps = 17/195 (8%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++LK++FSK+GE+ + TLK DP TGRSRGF F++FK++ES++K V+ + H +N K
Sbjct: 20 KDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDK-----VMDQKEHKLNGK 74
Query: 174 KIEAKKAKAKS-----GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNF 228
I+ K+AKA KIFVGGLSP+ +E+I+ +F FG + E+P D ++R+ F
Sbjct: 75 VIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGF 134
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKP-----EPFGVRGGRGGRGGRGGRG 283
CFITF+ E V +++ + + ++K A K + +G RGG GR GRG
Sbjct: 135 CFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSKEQYQQQQQWGSRGGFAGRA--RGRG 192
Query: 284 GRMAGGYGGYGGYGG 298
G GYG GG
Sbjct: 193 GDQQSGYGKVSRRGG 207
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 39/48 (81%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
D ++LK++FSK+GE+ + TLK DP TGRSRGF F++FK++ES++K
Sbjct: 16 DTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKV 63
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 47/81 (58%)
Query: 180 AKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVV 239
A+ + K+F+GGLS + +++K +F++FG +++ + D + + F F+ F+ V
Sbjct: 1 AQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESV 60
Query: 240 IDLLKNPKQKINDKEVDVKKA 260
++ + K+N K +D K+A
Sbjct: 61 DKVMDQKEHKLNGKVIDPKRA 81
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 46/94 (48%), Gaps = 7/94 (7%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKP----- 498
E+ E+P D ++R+ FCFITF+ E V +++ + + ++K A K
Sbjct: 116 EVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSKEQYQQQ 175
Query: 499 EPFGVRGGRGGRGGRGGRGGRMAGGYGGYGGYGG 532
+ +G RGG GR GRGG GYG GG
Sbjct: 176 QQWGSRGGFAGRA--RGRGGDQQSGYGKVSRRGG 207
Score = 44.3 bits (103), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D E+++E+F +GE+E++ L D T + RGF FI FK+ E ++K
Sbjct: 101 DTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 147
>gi|403263350|ref|XP_003924000.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 1
[Saimiri boliviensis boliviensis]
Length = 306
Score = 132 bits (331), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 81/204 (39%), Positives = 119/204 (58%), Gaps = 19/204 (9%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++LK++FSK+GE+ + TLK DP TGRSRGF F++FK++ES++K V+ + H +N K
Sbjct: 111 KDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDK-----VMDQKEHKLNGK 165
Query: 174 KIEAKKAKAKS-----GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNF 228
I+ K+AKA KIFVGGLSP+ +E+I+ +F FG + E+P D ++R+ F
Sbjct: 166 VIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGF 225
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKP-----EPFGVRGGRGGRGGRGGRG 283
CFITF+ E V +++ + + ++K A K + +G RGG GR GRG
Sbjct: 226 CFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSKEQYQQQQQWGSRGGFAGRA--RGRG 283
Query: 284 GRMAGGYGGYGGYGGGYGGILYKP 307
G GYG GG YKP
Sbjct: 284 GDQQSGYGKVSRRGGHQNS--YKP 305
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 39/47 (82%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D ++LK++FSK+GE+ + TLK DP TGRSRGF F++FK++ES++K
Sbjct: 107 DTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDK 153
Score = 52.4 bits (124), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 54/96 (56%)
Query: 165 EGNHVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQ 224
EG+ + + EA A+ + K+F+GGLS + +++K +F++FG +++ + D +
Sbjct: 77 EGHSNSSPRHTEAATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGR 136
Query: 225 RKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKA 260
+ F F+ F+ V ++ + K+N K +D K+A
Sbjct: 137 SRGFGFVLFKESESVDKVMDQKEHKLNGKVIDPKRA 172
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 46/94 (48%), Gaps = 7/94 (7%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKP----- 498
E+ E+P D ++R+ FCFITF+ E V +++ + + ++K A K
Sbjct: 207 EVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSKEQYQQQ 266
Query: 499 EPFGVRGGRGGRGGRGGRGGRMAGGYGGYGGYGG 532
+ +G RGG GR GRGG GYG GG
Sbjct: 267 QQWGSRGGFAGRA--RGRGGDQQSGYGKVSRRGG 298
Score = 43.9 bits (102), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D E+++E+F +GE+E++ L D T + RGF FI FK+ E ++K
Sbjct: 192 DTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 238
>gi|116256514|ref|NP_031542.2| heterogeneous nuclear ribonucleoprotein D0 isoform c [Mus musculus]
gi|29145079|gb|AAH49098.1| Heterogeneous nuclear ribonucleoprotein D [Mus musculus]
gi|148688366|gb|EDL20313.1| heterogeneous nuclear ribonucleoprotein D, isoform CRA_c [Mus
musculus]
Length = 306
Score = 132 bits (331), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 81/204 (39%), Positives = 119/204 (58%), Gaps = 19/204 (9%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++LK++FSK+GE+ + TLK DP TGRSRGF F++FK++ES++K V+ + H +N K
Sbjct: 111 KDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDK-----VMDQKEHKLNGK 165
Query: 174 KIEAKKAKAKS-----GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNF 228
I+ K+AKA KIFVGGLSP+ +E+I+ +F FG + E+P D ++R+ F
Sbjct: 166 VIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGF 225
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKP-----EPFGVRGGRGGRGGRGGRG 283
CFITF+ E V +++ + + ++K A K + +G RGG GR GRG
Sbjct: 226 CFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSKEQYQQQQQWGSRGGFAGRA--RGRG 283
Query: 284 GRMAGGYGGYGGYGGGYGGILYKP 307
G GYG GG YKP
Sbjct: 284 GDQQSGYGKVSRRGGHQNS--YKP 305
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 39/47 (82%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D ++LK++FSK+GE+ + TLK DP TGRSRGF F++FK++ES++K
Sbjct: 107 DTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDK 153
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 54/96 (56%)
Query: 165 EGNHVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQ 224
EG+ + + EA A+ + K+F+GGLS + +++K +F++FG +++ + D +
Sbjct: 77 EGHSNSSPRHTEAAAAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGR 136
Query: 225 RKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKA 260
+ F F+ F+ V ++ + K+N K +D K+A
Sbjct: 137 SRGFGFVLFKESESVDKVMDQKEHKLNGKVIDPKRA 172
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 46/94 (48%), Gaps = 7/94 (7%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKP----- 498
E+ E+P D ++R+ FCFITF+ E V +++ + + ++K A K
Sbjct: 207 EVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSKEQYQQQ 266
Query: 499 EPFGVRGGRGGRGGRGGRGGRMAGGYGGYGGYGG 532
+ +G RGG GR GRGG GYG GG
Sbjct: 267 QQWGSRGGFAGRA--RGRGGDQQSGYGKVSRRGG 298
Score = 43.9 bits (102), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D E+++E+F +GE+E++ L D T + RGF FI FK+ E ++K
Sbjct: 192 DTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 238
>gi|74001695|ref|XP_848950.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 2
[Canis lupus familiaris]
Length = 306
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 81/204 (39%), Positives = 119/204 (58%), Gaps = 19/204 (9%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++LK++FSK+GE+ + TLK DP TGRSRGF F++FK++ES++K V+ + H +N K
Sbjct: 111 KDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDK-----VMDQKEHKLNGK 165
Query: 174 KIEAKKAKAKS-----GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNF 228
I+ K+AKA KIFVGGLSP+ +E+I+ +F FG + E+P D ++R+ F
Sbjct: 166 VIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGF 225
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKP-----EPFGVRGGRGGRGGRGGRG 283
CFITF+ E V +++ + + ++K A K + +G RGG GR GRG
Sbjct: 226 CFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSKEQYQQQQQWGSRGGFAGRA--RGRG 283
Query: 284 GRMAGGYGGYGGYGGGYGGILYKP 307
G GYG GG YKP
Sbjct: 284 GDQQSGYGKVSRRGGHQNS--YKP 305
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 39/47 (82%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D ++LK++FSK+GE+ + TLK DP TGRSRGF F++FK++ES++K
Sbjct: 107 DTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDK 153
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 54/96 (56%)
Query: 165 EGNHVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQ 224
EG+ + + EA A+ + K+F+GGLS + +++K +F++FG +++ + D +
Sbjct: 77 EGHSNSSPRHSEAATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGR 136
Query: 225 RKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKA 260
+ F F+ F+ V ++ + K+N K +D K+A
Sbjct: 137 SRGFGFVLFKESESVDKVMDQKEHKLNGKVIDPKRA 172
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 46/94 (48%), Gaps = 7/94 (7%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKP----- 498
E+ E+P D ++R+ FCFITF+ E V +++ + + ++K A K
Sbjct: 207 EVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSKEQYQQQ 266
Query: 499 EPFGVRGGRGGRGGRGGRGGRMAGGYGGYGGYGG 532
+ +G RGG GR GRGG GYG GG
Sbjct: 267 QQWGSRGGFAGRA--RGRGGDQQSGYGKVSRRGG 298
Score = 43.9 bits (102), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D E+++E+F +GE+E++ L D T + RGF FI FK+ E ++K
Sbjct: 192 DTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 238
>gi|51477708|ref|NP_001003810.1| heterogeneous nuclear ribonucleoprotein D0 isoform d [Homo sapiens]
gi|332819424|ref|XP_003310366.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 [Pan
troglodytes]
gi|395735086|ref|XP_003776520.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 3
[Pongo abelii]
gi|119626285|gb|EAX05880.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa), isoform CRA_g [Homo sapiens]
Length = 287
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/195 (40%), Positives = 116/195 (59%), Gaps = 17/195 (8%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++LK++FSK+GE+ + TLK DP TGRSRGF F++FK++ES++K V+ + H +N K
Sbjct: 92 KDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDK-----VMDQKEHKLNGK 146
Query: 174 KIEAKKAKAKS-----GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNF 228
I+ K+AKA KIFVGGLSP+ +E+I+ +F FG + E+P D ++R+ F
Sbjct: 147 VIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGF 206
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKP-----EPFGVRGGRGGRGGRGGRG 283
CFITF+ E V +++ + + ++K A K + +G RGG GR GRG
Sbjct: 207 CFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSKEQYQQQQQWGSRGGFAGRA--RGRG 264
Query: 284 GRMAGGYGGYGGYGG 298
G GYG GG
Sbjct: 265 GDQQSGYGKVSRRGG 279
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 39/48 (81%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
D ++LK++FSK+GE+ + TLK DP TGRSRGF F++FK++ES++K
Sbjct: 88 DTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKV 135
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 51/87 (58%)
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
KI+A K + GK+F+GGLS + +++K +F++FG +++ + D + + F F+ F
Sbjct: 67 KIDASKNEEDEGKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLF 126
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKA 260
+ V ++ + K+N K +D K+A
Sbjct: 127 KESESVDKVMDQKEHKLNGKVIDPKRA 153
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 46/94 (48%), Gaps = 7/94 (7%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKP----- 498
E+ E+P D ++R+ FCFITF+ E V +++ + + ++K A K
Sbjct: 188 EVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSKEQYQQQ 247
Query: 499 EPFGVRGGRGGRGGRGGRGGRMAGGYGGYGGYGG 532
+ +G RGG GR GRGG GYG GG
Sbjct: 248 QQWGSRGGFAGRA--RGRGGDQQSGYGKVSRRGG 279
Score = 43.9 bits (102), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D E+++E+F +GE+E++ L D T + RGF FI FK+ E ++K
Sbjct: 173 DTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 219
>gi|74001711|ref|XP_857875.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 9
[Canis lupus familiaris]
Length = 287
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/195 (40%), Positives = 116/195 (59%), Gaps = 17/195 (8%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++LK++FSK+GE+ + TLK DP TGRSRGF F++FK++ES++K V+ + H +N K
Sbjct: 92 KDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDK-----VMDQKEHKLNGK 146
Query: 174 KIEAKKAKAKS-----GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNF 228
I+ K+AKA KIFVGGLSP+ +E+I+ +F FG + E+P D ++R+ F
Sbjct: 147 VIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGF 206
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKP-----EPFGVRGGRGGRGGRGGRG 283
CFITF+ E V +++ + + ++K A K + +G RGG GR GRG
Sbjct: 207 CFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSKEQYQQQQQWGSRGGFAGRA--RGRG 264
Query: 284 GRMAGGYGGYGGYGG 298
G GYG GG
Sbjct: 265 GDQQSGYGKVSRRGG 279
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 39/48 (81%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
D ++LK++FSK+GE+ + TLK DP TGRSRGF F++FK++ES++K
Sbjct: 88 DTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKV 135
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 51/87 (58%)
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
KI+A K + GK+F+GGLS + +++K +F++FG +++ + D + + F F+ F
Sbjct: 67 KIDASKNEEDEGKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLF 126
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKA 260
+ V ++ + K+N K +D K+A
Sbjct: 127 KESESVDKVMDQKEHKLNGKVIDPKRA 153
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 46/94 (48%), Gaps = 7/94 (7%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKP----- 498
E+ E+P D ++R+ FCFITF+ E V +++ + + ++K A K
Sbjct: 188 EVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSKEQYQQQ 247
Query: 499 EPFGVRGGRGGRGGRGGRGGRMAGGYGGYGGYGG 532
+ +G RGG GR GRGG GYG GG
Sbjct: 248 QQWGSRGGFAGRA--RGRGGDQQSGYGKVSRRGG 279
Score = 43.9 bits (102), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D E+++E+F +GE+E++ L D T + RGF FI FK+ E ++K
Sbjct: 173 DTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 219
>gi|116256516|ref|NP_001070735.1| heterogeneous nuclear ribonucleoprotein D0 isoform d [Mus musculus]
gi|148688365|gb|EDL20312.1| heterogeneous nuclear ribonucleoprotein D, isoform CRA_b [Mus
musculus]
Length = 287
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/195 (40%), Positives = 116/195 (59%), Gaps = 17/195 (8%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++LK++FSK+GE+ + TLK DP TGRSRGF F++FK++ES++K V+ + H +N K
Sbjct: 92 KDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDK-----VMDQKEHKLNGK 146
Query: 174 KIEAKKAKAKS-----GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNF 228
I+ K+AKA KIFVGGLSP+ +E+I+ +F FG + E+P D ++R+ F
Sbjct: 147 VIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGF 206
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKP-----EPFGVRGGRGGRGGRGGRG 283
CFITF+ E V +++ + + ++K A K + +G RGG GR GRG
Sbjct: 207 CFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSKEQYQQQQQWGSRGGFAGRA--RGRG 264
Query: 284 GRMAGGYGGYGGYGG 298
G GYG GG
Sbjct: 265 GDQQSGYGKVSRRGG 279
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 39/47 (82%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D ++LK++FSK+GE+ + TLK DP TGRSRGF F++FK++ES++K
Sbjct: 88 DTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDK 134
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 51/87 (58%)
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
KI+A K + GK+F+GGLS + +++K +F++FG +++ + D + + F F+ F
Sbjct: 67 KIDASKNEEDEGKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLF 126
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKA 260
+ V ++ + K+N K +D K+A
Sbjct: 127 KESESVDKVMDQKEHKLNGKVIDPKRA 153
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 46/94 (48%), Gaps = 7/94 (7%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKP----- 498
E+ E+P D ++R+ FCFITF+ E V +++ + + ++K A K
Sbjct: 188 EVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSKEQYQQQ 247
Query: 499 EPFGVRGGRGGRGGRGGRGGRMAGGYGGYGGYGG 532
+ +G RGG GR GRGG GYG GG
Sbjct: 248 QQWGSRGGFAGRA--RGRGGDQQSGYGKVSRRGG 279
Score = 43.9 bits (102), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D E+++E+F +GE+E++ L D T + RGF FI FK+ E ++K
Sbjct: 173 DTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 219
>gi|410903808|ref|XP_003965385.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0-like isoform
3 [Takifugu rubripes]
Length = 264
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 76/185 (41%), Positives = 112/185 (60%), Gaps = 12/185 (6%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++LK++F KYGE+ + TLK DP TGRSRGF F++FK+ ES+EK V ++ H +N K
Sbjct: 70 KDLKDYFCKYGEVVDCTLKLDPITGRSRGFGFVLFKEPESVEK-----VASQKEHKLNGK 124
Query: 174 KIEAKKAKAKSG-----KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNF 228
I+ KKAKA G KIFVGGLSP+ +E+++ +F FG + E+P + ++R+ F
Sbjct: 125 VIDPKKAKAMKGKEPVKKIFVGGLSPDTPEEKVREYFGAFGEVESIELPMETKTNKRRGF 184
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGVR--GGRGGRGGRGGRGGRM 286
CFITF+ E V +++ I + ++K A K + + GGRGG R G
Sbjct: 185 CFITFKEEEPVKCIMEKKFHNIGLSKCEIKVAVSKEQYQQQQYWGGRGGYSSRARGRGDQ 244
Query: 287 AGGYG 291
+GGYG
Sbjct: 245 SGGYG 249
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 39/51 (76%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVE 654
D ++LK++F KYGE+ + TLK DP TGRSRGF F++FK+ ES+EK + +
Sbjct: 66 DTTKKDLKDYFCKYGEVVDCTLKLDPITGRSRGFGFVLFKEPESVEKVASQ 116
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 50/90 (55%)
Query: 171 NNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCF 230
+ +I+A K + GK+FVGGLS + +++K +F ++G +++ + D + + F F
Sbjct: 42 DGSRIDASKNEEDEGKMFVGGLSWDTTKKDLKDYFCKYGEVVDCTLKLDPITGRSRGFGF 101
Query: 231 ITFEHESVVIDLLKNPKQKINDKEVDVKKA 260
+ F+ V + + K+N K +D KKA
Sbjct: 102 VLFKEPESVEKVASQKEHKLNGKVIDPKKA 131
Score = 42.7 bits (99), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 2/84 (2%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGV 503
E+ E+P + ++R+ FCFITF+ E V +++ I + ++K A K +
Sbjct: 166 EVESIELPMETKTNKRRGFCFITFKEEEPVKCIMEKKFHNIGLSKCEIKVAVSKEQYQQQ 225
Query: 504 R--GGRGGRGGRGGRGGRMAGGYG 525
+ GGRGG R G +GGYG
Sbjct: 226 QYWGGRGGYSSRARGRGDQSGGYG 249
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 30/46 (65%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLE 649
D E+++E+F +GE+E++ L + T + RGF FI FK+ E ++
Sbjct: 151 DTPEEKVREYFGAFGEVESIELPMETKTNKRRGFCFITFKEEEPVK 196
>gi|410903804|ref|XP_003965383.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0-like isoform
1 [Takifugu rubripes]
Length = 314
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/191 (41%), Positives = 114/191 (59%), Gaps = 13/191 (6%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++LK++F KYGE+ + TLK DP TGRSRGF F++FK+ ES+EK V ++ H +N K
Sbjct: 70 KDLKDYFCKYGEVVDCTLKLDPITGRSRGFGFVLFKEPESVEK-----VASQKEHKLNGK 124
Query: 174 KIEAKKAKAKSG-----KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNF 228
I+ KKAKA G KIFVGGLSP+ +E+++ +F FG + E+P + ++R+ F
Sbjct: 125 VIDPKKAKAMKGKEPVKKIFVGGLSPDTPEEKVREYFGAFGEVESIELPMETKTNKRRGF 184
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGVR--GGRGGRGGRG-GRGGR 285
CFITF+ E V +++ I + ++K A K + + GGRGG R GRGG
Sbjct: 185 CFITFKEEEPVKCIMEKKFHNIGLSKCEIKVAVSKEQYQQQQYWGGRGGYSSRARGRGGP 244
Query: 286 MAGGYGGYGGY 296
GYG Y
Sbjct: 245 NQNWNQGYGNY 255
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 39/51 (76%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVE 654
D ++LK++F KYGE+ + TLK DP TGRSRGF F++FK+ ES+EK + +
Sbjct: 66 DTTKKDLKDYFCKYGEVVDCTLKLDPITGRSRGFGFVLFKEPESVEKVASQ 116
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 50/90 (55%)
Query: 171 NNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCF 230
+ +I+A K + GK+FVGGLS + +++K +F ++G +++ + D + + F F
Sbjct: 42 DGSRIDASKNEEDEGKMFVGGLSWDTTKKDLKDYFCKYGEVVDCTLKLDPITGRSRGFGF 101
Query: 231 ITFEHESVVIDLLKNPKQKINDKEVDVKKA 260
+ F+ V + + K+N K +D KKA
Sbjct: 102 VLFKEPESVEKVASQKEHKLNGKVIDPKKA 131
Score = 43.1 bits (100), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGV 503
E+ E+P + ++R+ FCFITF+ E V +++ I + ++K A K +
Sbjct: 166 EVESIELPMETKTNKRRGFCFITFKEEEPVKCIMEKKFHNIGLSKCEIKVAVSKEQYQQQ 225
Query: 504 R--GGRGGRGGRG-GRGGRMAGGYGGYGGY 530
+ GGRGG R GRGG GYG Y
Sbjct: 226 QYWGGRGGYSSRARGRGGPNQNWNQGYGNY 255
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 30/46 (65%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLE 649
D E+++E+F +GE+E++ L + T + RGF FI FK+ E ++
Sbjct: 151 DTPEEKVREYFGAFGEVESIELPMETKTNKRRGFCFITFKEEEPVK 196
>gi|47228465|emb|CAG05285.1| unnamed protein product [Tetraodon nigroviridis]
Length = 249
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/179 (42%), Positives = 110/179 (61%), Gaps = 13/179 (7%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++LK++F KYGE+ + TLK DP TGRSRGF F++FKD ES+EK V ++ H +N K
Sbjct: 71 KDLKDYFCKYGEVVDCTLKLDPITGRSRGFGFVLFKDAESVEK-----VASQKEHKLNGK 125
Query: 174 KIEAKKAKAKSG-----KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNF 228
I+ KKAKA G KIFVGGLSP+ +E+++ +F FG + E+P + ++R+ F
Sbjct: 126 VIDPKKAKAMKGKEPVKKIFVGGLSPDTPEEKVREYFGAFGEVESIELPMETKTNKRRGF 185
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGVR--GGRGGRGGRG-GRGG 284
CFITF+ E V +++ I + ++K A K + + GGRGG R GRGG
Sbjct: 186 CFITFKEEEPVKCIMEKKFHNIGLSKCEIKVAVSKEQYQQQQYWGGRGGYSSRARGRGG 244
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 39/51 (76%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVE 654
D ++LK++F KYGE+ + TLK DP TGRSRGF F++FKD ES+EK + +
Sbjct: 67 DTTKKDLKDYFCKYGEVVDCTLKLDPITGRSRGFGFVLFKDAESVEKVASQ 117
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 50/90 (55%)
Query: 171 NNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCF 230
+ +I+A K + GK+FVGGLS + +++K +F ++G +++ + D + + F F
Sbjct: 43 DGSRIDASKNEEDEGKMFVGGLSWDTTKKDLKDYFCKYGEVVDCTLKLDPITGRSRGFGF 102
Query: 231 ITFEHESVVIDLLKNPKQKINDKEVDVKKA 260
+ F+ V + + K+N K +D KKA
Sbjct: 103 VLFKDAESVEKVASQKEHKLNGKVIDPKKA 132
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 30/46 (65%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLE 649
D E+++E+F +GE+E++ L + T + RGF FI FK+ E ++
Sbjct: 152 DTPEEKVREYFGAFGEVESIELPMETKTNKRRGFCFITFKEEEPVK 197
Score = 40.0 bits (92), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 3/78 (3%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGV 503
E+ E+P + ++R+ FCFITF+ E V +++ I + ++K A K +
Sbjct: 167 EVESIELPMETKTNKRRGFCFITFKEEEPVKCIMEKKFHNIGLSKCEIKVAVSKEQYQQQ 226
Query: 504 R--GGRGGRGGRG-GRGG 518
+ GGRGG R GRGG
Sbjct: 227 QYWGGRGGYSSRARGRGG 244
>gi|9588100|dbj|BAB03467.1| RNA binding protein p40 AUF1 [Rattus norvegicus]
Length = 304
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/204 (39%), Positives = 119/204 (58%), Gaps = 19/204 (9%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++LK++FSK+G++ + TLK DP TGRSRGF F++FK++ES++K V+ + H +N K
Sbjct: 109 KDLKDYFSKFGDVVDCTLKLDPITGRSRGFGFVLFKESESVDK-----VMDQKEHKLNGK 163
Query: 174 KIEAKKAKAKS-----GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNF 228
I+ K+AKA KIFVGGLSP+ +E+I+ +F FG + E+P D ++R+ F
Sbjct: 164 VIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGF 223
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKP-----EPFGVRGGRGGRGGRGGRG 283
CFITF+ E V +++ + + ++K A K + +G RGG GR GRG
Sbjct: 224 CFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSKEQYQQQQQWGSRGGFAGRA--RGRG 281
Query: 284 GRMAGGYGGYGGYGGGYGGILYKP 307
G GYG GG YKP
Sbjct: 282 GDQQSGYGKVSRRGGHQNS--YKP 303
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 39/47 (82%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D ++LK++FSK+G++ + TLK DP TGRSRGF F++FK++ES++K
Sbjct: 105 DTTKKDLKDYFSKFGDVVDCTLKLDPITGRSRGFGFVLFKESESVDK 151
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 55/96 (57%)
Query: 165 EGNHVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQ 224
EG+ + + EA A+ + K+F+GGLS + +++K +F++FG++++ + D +
Sbjct: 75 EGHSNSSPRHTEAATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGDVVDCTLKLDPITGR 134
Query: 225 RKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKA 260
+ F F+ F+ V ++ + K+N K +D K+A
Sbjct: 135 SRGFGFVLFKESESVDKVMDQKEHKLNGKVIDPKRA 170
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 46/94 (48%), Gaps = 7/94 (7%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKP----- 498
E+ E+P D ++R+ FCFITF+ E V +++ + + ++K A K
Sbjct: 205 EVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSKEQYQQQ 264
Query: 499 EPFGVRGGRGGRGGRGGRGGRMAGGYGGYGGYGG 532
+ +G RGG GR GRGG GYG GG
Sbjct: 265 QQWGSRGGFAGRA--RGRGGDQQSGYGKVSRRGG 296
Score = 43.9 bits (102), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D E+++E+F +GE+E++ L D T + RGF FI FK+ E ++K
Sbjct: 190 DTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 236
>gi|196476793|gb|ACG76260.1| heterogeneous nuclear ribonucleoprotein [Amblyomma americanum]
Length = 195
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/154 (42%), Positives = 100/154 (64%), Gaps = 7/154 (4%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++L+E+FSK+G + +V +K+DP TG+SRGF F+ F K ++E V+ H + K
Sbjct: 46 KDLREYFSKFGVVVDVNIKTDPTTGKSRGFGFVTFN-----AKDAIEAVLKATPHTVKGK 100
Query: 174 KIEAKKAKAKSG--KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFI 231
+I+ K AKA+ G KIFVGGL +M + +IKA+F +G + E+P+DK+K QR+ F F+
Sbjct: 101 QIDPKPAKARPGIKKIFVGGLESDMPEADIKAYFEMYGPVENVELPFDKAKIQRRQFAFV 160
Query: 232 TFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE 265
TFE E V + + P QK+ +K DV KAT P+
Sbjct: 161 TFEREDSVDLVCREPMQKMGNKGCDVTKATXMPD 194
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 38/58 (65%), Gaps = 2/58 (3%)
Query: 442 PMEIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE 499
P+E +E +P+DK+K QR+ F F+TFE E V + + P QK+ +K DV KAT P+
Sbjct: 139 PVENVE--LPFDKAKIQRRQFAFVTFEREDSVDLVCREPMQKMGNKGCDVTKATXMPD 194
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 34/46 (73%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLE 649
D ++L+E+FSK+G + +V +K+DP TG+SRGF F+ F +++E
Sbjct: 42 DTDNKDLREYFSKFGVVVDVNIKTDPTTGKSRGFGFVTFNAKDAIE 87
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 47/79 (59%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+FVGG+S + +++++ +F++FG +++ + D + + + F F+TF + + +LK
Sbjct: 33 KLFVGGISWDTDNKDLREYFSKFGVVVDVNIKTDPTTGKSRGFGFVTFNAKDAIEAVLKA 92
Query: 246 PKQKINDKEVDVKKATPKP 264
+ K++D K A +P
Sbjct: 93 TPHTVKGKQIDPKPAKARP 111
>gi|149046824|gb|EDL99598.1| heterogeneous nuclear ribonucleoprotein D, isoform CRA_g [Rattus
norvegicus]
Length = 208
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/195 (39%), Positives = 116/195 (59%), Gaps = 17/195 (8%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++LK++FSK+G++ + TLK DP TGRSRGF F++FK++ES++K V+ + H +N K
Sbjct: 13 KDLKDYFSKFGDVVDCTLKLDPITGRSRGFGFVLFKESESVDK-----VMDQKEHKLNGK 67
Query: 174 KIEAKKAKAKS-----GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNF 228
I+ K+AKA KIFVGGLSP+ +E+I+ +F FG + E+P D ++R+ F
Sbjct: 68 VIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGF 127
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKP-----EPFGVRGGRGGRGGRGGRG 283
CFITF+ E V +++ + + ++K A K + +G RGG GR GRG
Sbjct: 128 CFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSKEQYQQQQQWGSRGGFAGRA--RGRG 185
Query: 284 GRMAGGYGGYGGYGG 298
G GYG GG
Sbjct: 186 GDQQSGYGKVSRRGG 200
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 39/48 (81%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
D ++LK++FSK+G++ + TLK DP TGRSRGF F++FK++ES++K
Sbjct: 9 DTTKKDLKDYFSKFGDVVDCTLKLDPITGRSRGFGFVLFKESESVDKV 56
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 44/74 (59%)
Query: 187 IFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNP 246
+F+GGLS + +++K +F++FG++++ + D + + F F+ F+ V ++
Sbjct: 1 MFIGGLSWDTTKKDLKDYFSKFGDVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQK 60
Query: 247 KQKINDKEVDVKKA 260
+ K+N K +D K+A
Sbjct: 61 EHKLNGKVIDPKRA 74
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 46/94 (48%), Gaps = 7/94 (7%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKP----- 498
E+ E+P D ++R+ FCFITF+ E V +++ + + ++K A K
Sbjct: 109 EVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSKEQYQQQ 168
Query: 499 EPFGVRGGRGGRGGRGGRGGRMAGGYGGYGGYGG 532
+ +G RGG GR GRGG GYG GG
Sbjct: 169 QQWGSRGGFAGRA--RGRGGDQQSGYGKVSRRGG 200
Score = 44.3 bits (103), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D E+++E+F +GE+E++ L D T + RGF FI FK+ E ++K
Sbjct: 94 DTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 140
>gi|417410217|gb|JAA51585.1| Putative rna-binding protein musashi/mrna cleavage and
polyadenylation factor i complex subunit hrp1, partial
[Desmodus rotundus]
Length = 379
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/204 (39%), Positives = 120/204 (58%), Gaps = 20/204 (9%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++LK++FSK+GE+ + TLK DP TGRSRGF F++FK++ES++K V+ + H +N K
Sbjct: 185 KDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDK-----VMDQKEHKLNGK 239
Query: 174 KIEAKKAKAKS-----GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNF 228
I+ K+AKA KIFVGGLSP+ +E+I+ +F FG + E+P DK+ ++R+ F
Sbjct: 240 VIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDKT-NKRRGF 298
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKP-----EPFGVRGGRGGRGGRGGRG 283
CFITF+ E V +++ + + ++K A K + + RGG GR GRG
Sbjct: 299 CFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSKEQYQQQQQWASRGGFAGRA--RGRG 356
Query: 284 GRMAGGYGGYGGYGGGYGGILYKP 307
G GYG GG YKP
Sbjct: 357 GDQQSGYGKVSRRGGHQNS--YKP 378
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 39/47 (82%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D ++LK++FSK+GE+ + TLK DP TGRSRGF F++FK++ES++K
Sbjct: 181 DTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDK 227
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 54/96 (56%)
Query: 165 EGNHVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQ 224
EG+ + + EA A+ + K+F+GGLS + +++K +F++FG +++ + D +
Sbjct: 151 EGHSNSSPRHSEAAAAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGR 210
Query: 225 RKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKA 260
+ F F+ F+ V ++ + K+N K +D K+A
Sbjct: 211 SRGFGFVLFKESESVDKVMDQKEHKLNGKVIDPKRA 246
Score = 46.2 bits (108), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 47/94 (50%), Gaps = 8/94 (8%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKP----- 498
E+ E+P DK+ ++R+ FCFITF+ E V +++ + + ++K A K
Sbjct: 281 EVESIELPMDKT-NKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSKEQYQQQ 339
Query: 499 EPFGVRGGRGGRGGRGGRGGRMAGGYGGYGGYGG 532
+ + RGG GR GRGG GYG GG
Sbjct: 340 QQWASRGGFAGRA--RGRGGDQQSGYGKVSRRGG 371
Score = 40.4 bits (93), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D E+++E+F +GE+E++ L D T + RGF FI FK+ E ++K
Sbjct: 266 DTPEEKIREYFGGFGEVESIELPMD-KTNKRRGFCFITFKEEEPVKK 311
>gi|127139464|ref|NP_001076009.1| heterogeneous nuclear ribonucleoprotein D0 isoform c [Rattus
norvegicus]
gi|149046817|gb|EDL99591.1| heterogeneous nuclear ribonucleoprotein D, isoform CRA_b [Rattus
norvegicus]
Length = 304
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/204 (39%), Positives = 119/204 (58%), Gaps = 19/204 (9%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++LK++FSK+G++ + TLK DP TGRSRGF F++FK++ES++K V+ + H +N K
Sbjct: 109 KDLKDYFSKFGDVVDCTLKLDPITGRSRGFGFVLFKESESVDK-----VMDQKEHKLNGK 163
Query: 174 KIEAKKAKAKS-----GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNF 228
I+ K+AKA KIFVGGLSP+ +E+I+ +F FG + E+P D ++R+ F
Sbjct: 164 VIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGF 223
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKP-----EPFGVRGGRGGRGGRGGRG 283
CFITF+ E V +++ + + ++K A K + +G RGG GR GRG
Sbjct: 224 CFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSKEQYQQQQQWGSRGGFAGRA--RGRG 281
Query: 284 GRMAGGYGGYGGYGGGYGGILYKP 307
G GYG GG YKP
Sbjct: 282 GDQQSGYGKVSRRGGHQNS--YKP 303
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 39/47 (82%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D ++LK++FSK+G++ + TLK DP TGRSRGF F++FK++ES++K
Sbjct: 105 DTTKKDLKDYFSKFGDVVDCTLKLDPITGRSRGFGFVLFKESESVDK 151
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 55/96 (57%)
Query: 165 EGNHVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQ 224
EG+ + + EA A+ + K+F+GGLS + +++K +F++FG++++ + D +
Sbjct: 75 EGHSNSSPRHTEAATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGDVVDCTLKLDPITGR 134
Query: 225 RKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKA 260
+ F F+ F+ V ++ + K+N K +D K+A
Sbjct: 135 SRGFGFVLFKESESVDKVMDQKEHKLNGKVIDPKRA 170
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 46/94 (48%), Gaps = 7/94 (7%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKP----- 498
E+ E+P D ++R+ FCFITF+ E V +++ + + ++K A K
Sbjct: 205 EVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSKEQYQQQ 264
Query: 499 EPFGVRGGRGGRGGRGGRGGRMAGGYGGYGGYGG 532
+ +G RGG GR GRGG GYG GG
Sbjct: 265 QQWGSRGGFAGRA--RGRGGDQQSGYGKVSRRGG 296
Score = 43.9 bits (102), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D E+++E+F +GE+E++ L D T + RGF FI FK+ E ++K
Sbjct: 190 DTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 236
>gi|9588102|dbj|BAB03468.1| RNA binding protein p37 AUF1 [Rattus norvegicus]
Length = 285
Score = 130 bits (327), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 77/195 (39%), Positives = 116/195 (59%), Gaps = 17/195 (8%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++LK++FSK+G++ + TLK DP TGRSRGF F++FK++ES++K V+ + H +N K
Sbjct: 90 KDLKDYFSKFGDVVDCTLKLDPITGRSRGFGFVLFKESESVDK-----VMDQKEHKLNGK 144
Query: 174 KIEAKKAKAKS-----GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNF 228
I+ K+AKA KIFVGGLSP+ +E+I+ +F FG + E+P D ++R+ F
Sbjct: 145 VIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGF 204
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKP-----EPFGVRGGRGGRGGRGGRG 283
CFITF+ E V +++ + + ++K A K + +G RGG GR GRG
Sbjct: 205 CFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSKEQYQQQQQWGSRGGFAGRA--RGRG 262
Query: 284 GRMAGGYGGYGGYGG 298
G GYG GG
Sbjct: 263 GDQQSGYGKVSRRGG 277
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 39/48 (81%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
D ++LK++FSK+G++ + TLK DP TGRSRGF F++FK++ES++K
Sbjct: 86 DTTKKDLKDYFSKFGDVVDCTLKLDPITGRSRGFGFVLFKESESVDKV 133
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 52/87 (59%)
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
KI+A K + GK+F+GGLS + +++K +F++FG++++ + D + + F F+ F
Sbjct: 65 KIDASKNEEDEGKMFIGGLSWDTTKKDLKDYFSKFGDVVDCTLKLDPITGRSRGFGFVLF 124
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKA 260
+ V ++ + K+N K +D K+A
Sbjct: 125 KESESVDKVMDQKEHKLNGKVIDPKRA 151
Score = 48.5 bits (114), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 46/94 (48%), Gaps = 7/94 (7%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKP----- 498
E+ E+P D ++R+ FCFITF+ E V +++ + + ++K A K
Sbjct: 186 EVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSKEQYQQQ 245
Query: 499 EPFGVRGGRGGRGGRGGRGGRMAGGYGGYGGYGG 532
+ +G RGG GR GRGG GYG GG
Sbjct: 246 QQWGSRGGFAGRA--RGRGGDQQSGYGKVSRRGG 277
Score = 43.9 bits (102), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D E+++E+F +GE+E++ L D T + RGF FI FK+ E ++K
Sbjct: 171 DTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 217
>gi|417410064|gb|JAA51513.1| Putative rna-binding protein musashi/mrna cleavage and
polyadenylation factor i complex subunit hrp1, partial
[Desmodus rotundus]
Length = 360
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 78/195 (40%), Positives = 117/195 (60%), Gaps = 18/195 (9%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++LK++FSK+GE+ + TLK DP TGRSRGF F++FK++ES++K V+ + H +N K
Sbjct: 166 KDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDK-----VMDQKEHKLNGK 220
Query: 174 KIEAKKAKAKS-----GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNF 228
I+ K+AKA KIFVGGLSP+ +E+I+ +F FG + E+P DK+ ++R+ F
Sbjct: 221 VIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDKT-NKRRGF 279
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKP-----EPFGVRGGRGGRGGRGGRG 283
CFITF+ E V +++ + + ++K A K + + RGG GR GRG
Sbjct: 280 CFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSKEQYQQQQQWASRGGFAGRA--RGRG 337
Query: 284 GRMAGGYGGYGGYGG 298
G GYG GG
Sbjct: 338 GDQQSGYGKVSRRGG 352
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 39/47 (82%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D ++LK++FSK+GE+ + TLK DP TGRSRGF F++FK++ES++K
Sbjct: 162 DTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDK 208
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 51/87 (58%)
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
KI+A K + GK+F+GGLS + +++K +F++FG +++ + D + + F F+ F
Sbjct: 141 KIDASKNEEDEGKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLF 200
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKA 260
+ V ++ + K+N K +D K+A
Sbjct: 201 KESESVDKVMDQKEHKLNGKVIDPKRA 227
Score = 45.8 bits (107), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 47/94 (50%), Gaps = 8/94 (8%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKP----- 498
E+ E+P DK+ ++R+ FCFITF+ E V +++ + + ++K A K
Sbjct: 262 EVESIELPMDKT-NKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSKEQYQQQ 320
Query: 499 EPFGVRGGRGGRGGRGGRGGRMAGGYGGYGGYGG 532
+ + RGG GR GRGG GYG GG
Sbjct: 321 QQWASRGGFAGRA--RGRGGDQQSGYGKVSRRGG 352
Score = 40.4 bits (93), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D E+++E+F +GE+E++ L D T + RGF FI FK+ E ++K
Sbjct: 247 DTPEEKIREYFGGFGEVESIELPMD-KTNKRRGFCFITFKEEEPVKK 292
>gi|340382092|ref|XP_003389555.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A2 homolog
1-like [Amphimedon queenslandica]
Length = 344
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 82/215 (38%), Positives = 120/215 (55%), Gaps = 31/215 (14%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ TE+ L+E+F +YG I + LK DP TGRSRGFAF++FK+ ++++K ++
Sbjct: 63 GLTSDTTEQTLQEYFEEYGTISEIILKVDPITGRSRGFAFLLFKENDAVDK-----ILEA 117
Query: 166 GNHVINNKKIEAKKA---------KAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEM 216
H I +K ++ KKA K ++ K+FVGG+ +M + IK HF +FG I E +
Sbjct: 118 SPHTIGDKVVDTKKAIPHAVHQQMKQRTKKVFVGGVPTDMPEHTIKEHFEKFGPIEEVAL 177
Query: 217 PYDK---SKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE-------- 265
+K S +R+ FCF+TF E N KIN+ +V+VK+ATP+ +
Sbjct: 178 VTEKGAGSNKKRRGFCFVTFLSEDTAEKACCNSFHKINESDVEVKRATPREQDKRMSHGN 237
Query: 266 ---PFGVRGGRGG-RGGRGGRGGRMAGGYGGYGGY 296
PF RGGRG + GRGG A YGG+ GY
Sbjct: 238 AAPPFMGRGGRGHIMHAQSGRGGHWA-PYGGHAGY 271
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 46/88 (52%), Gaps = 13/88 (14%)
Query: 455 SKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE-----------PFGV 503
S +R+ FCF+TF E N KIN+ +V+VK+ATP+ + PF
Sbjct: 185 SNKKRRGFCFVTFLSEDTAEKACCNSFHKINESDVEVKRATPREQDKRMSHGNAAPPFMG 244
Query: 504 RGGRGG-RGGRGGRGGRMAGGYGGYGGY 530
RGGRG + GRGG A YGG+ GY
Sbjct: 245 RGGRGHIMHAQSGRGGHWA-PYGGHAGY 271
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 38/51 (74%), Gaps = 1/51 (1%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
G+ TE+ L+E+F +YG I + LK DP TGRSRGFAF++FK+ ++++K
Sbjct: 63 GLTSDTTEQTLQEYFEEYGTISEIILKVDPITGRSRGFAFLLFKENDAVDK 113
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 42/77 (54%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+FVGGL+ + ++ ++ +F ++G I E + D + + F F+ F+ V +L+
Sbjct: 58 KLFVGGLTSDTTEQTLQEYFEEYGTISEIILKVDPITGRSRGFAFLLFKENDAVDKILEA 117
Query: 246 PKQKINDKEVDVKKATP 262
I DK VD KKA P
Sbjct: 118 SPHTIGDKVVDTKKAIP 134
Score = 39.3 bits (90), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 27/45 (60%), Gaps = 3/45 (6%)
Query: 610 LKEHFSKYGEIENVTLKSDPNTG---RSRGFAFIVFKDTESLEKA 651
+KEHF K+G IE V L ++ G + RGF F+ F ++ EKA
Sbjct: 162 IKEHFEKFGPIEEVALVTEKGAGSNKKRRGFCFVTFLSEDTAEKA 206
>gi|127138754|ref|NP_001076010.1| heterogeneous nuclear ribonucleoprotein D0 isoform d [Rattus
norvegicus]
gi|149046820|gb|EDL99594.1| heterogeneous nuclear ribonucleoprotein D, isoform CRA_d [Rattus
norvegicus]
Length = 285
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 77/195 (39%), Positives = 116/195 (59%), Gaps = 17/195 (8%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++LK++FSK+G++ + TLK DP TGRSRGF F++FK++ES++K V+ + H +N K
Sbjct: 90 KDLKDYFSKFGDVVDCTLKLDPITGRSRGFGFVLFKESESVDK-----VMDQKEHKLNGK 144
Query: 174 KIEAKKAKAKS-----GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNF 228
I+ K+AKA KIFVGGLSP+ +E+I+ +F FG + E+P D ++R+ F
Sbjct: 145 VIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGF 204
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKP-----EPFGVRGGRGGRGGRGGRG 283
CFITF+ E V +++ + + ++K A K + +G RGG GR GRG
Sbjct: 205 CFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSKEQYQQQQQWGSRGGFAGRA--RGRG 262
Query: 284 GRMAGGYGGYGGYGG 298
G GYG GG
Sbjct: 263 GDQQSGYGKVSRRGG 277
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 39/48 (81%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
D ++LK++FSK+G++ + TLK DP TGRSRGF F++FK++ES++K
Sbjct: 86 DTTKKDLKDYFSKFGDVVDCTLKLDPITGRSRGFGFVLFKESESVDKV 133
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 52/87 (59%)
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
KI+A K + GK+F+GGLS + +++K +F++FG++++ + D + + F F+ F
Sbjct: 65 KIDASKNEEDEGKMFIGGLSWDTTKKDLKDYFSKFGDVVDCTLKLDPITGRSRGFGFVLF 124
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKA 260
+ V ++ + K+N K +D K+A
Sbjct: 125 KESESVDKVMDQKEHKLNGKVIDPKRA 151
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 46/94 (48%), Gaps = 7/94 (7%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKP----- 498
E+ E+P D ++R+ FCFITF+ E V +++ + + ++K A K
Sbjct: 186 EVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSKEQYQQQ 245
Query: 499 EPFGVRGGRGGRGGRGGRGGRMAGGYGGYGGYGG 532
+ +G RGG GR GRGG GYG GG
Sbjct: 246 QQWGSRGGFAGRA--RGRGGDQQSGYGKVSRRGG 277
Score = 43.9 bits (102), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D E+++E+F +GE+E++ L D T + RGF FI FK+ E ++K
Sbjct: 171 DTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 217
>gi|449499935|ref|XP_004175398.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 [Taeniopygia
guttata]
Length = 340
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 79/199 (39%), Positives = 117/199 (58%), Gaps = 17/199 (8%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++LK++FSK+GE+ + TLK DP TGRSRGF F++FK++ES++K V+ + H +N K
Sbjct: 74 KDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDK-----VMDQKEHKLNGK 128
Query: 174 KIEAKKAKAKS-----GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNF 228
I+ K+AKA KIFVGGLSP+ +E+I+ +F FG + E+P D ++R+ F
Sbjct: 129 VIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGF 188
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKP-----EPFGVRGGRGGRGGRGGRG 283
CFITF+ E V +++ + + ++K A K + +G RGG GR RG G
Sbjct: 189 CFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSKEQYQQQQQWGSRGGFVGR-ARGRSG 247
Query: 284 GRMAGGYGGYGGY-GGGYG 301
G GY Y GYG
Sbjct: 248 GPSQSWNQGYSNYWNQGYG 266
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 39/48 (81%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
D ++LK++FSK+GE+ + TLK DP TGRSRGF F++FK++ES++K
Sbjct: 70 DTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKV 117
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 51/87 (58%)
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
KI+A K + GK+F+GGLS + +++K +F++FG +++ + D + + F F+ F
Sbjct: 49 KIDASKNEEDEGKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLF 108
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKA 260
+ V ++ + K+N K +D K+A
Sbjct: 109 KESESVDKVMDQKEHKLNGKVIDPKRA 135
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 47/98 (47%), Gaps = 7/98 (7%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKP----- 498
E+ E+P D ++R+ FCFITF+ E V +++ + + ++K A K
Sbjct: 170 EVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSKEQYQQQ 229
Query: 499 EPFGVRGGRGGRGGRGGRGGRMAGGYGGYGGY-GGGYG 535
+ +G RGG GR RG GG GY Y GYG
Sbjct: 230 QQWGSRGGFVGR-ARGRSGGPSQSWNQGYSNYWNQGYG 266
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D E+++E+F +GE+E++ L D T + RGF FI FK+ E ++K
Sbjct: 155 DTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 201
>gi|348535413|ref|XP_003455195.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0-like
[Oreochromis niloticus]
Length = 316
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 74/186 (39%), Positives = 112/186 (60%), Gaps = 3/186 (1%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++LK++FSK+GE+ + TLK DP TGRSRGF F++FK+ ES++K + + VI+ K
Sbjct: 70 KDLKDYFSKFGEVVDCTLKLDPMTGRSRGFGFVLFKEPESVDKVASQKEHKLNGKVIDPK 129
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
K +A K+K KIFVGGLSP+ +E+++ +F FG + E+P + ++R+ FCFITF
Sbjct: 130 KAKAMKSKEPVKKIFVGGLSPDTPEEKVREYFGAFGEVESVELPMENKTNKRRGFCFITF 189
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGVR--GGRGGRGGRG-GRGGRMAGGY 290
+ E V +++ I + ++K A K + + GGRGG R GRGG
Sbjct: 190 KEEEPVKKIMEKKYHNIGLSKCEIKVAMSKEQYQQQQYWGGRGGYSSRSRGRGGPNQNWN 249
Query: 291 GGYGGY 296
GYG Y
Sbjct: 250 QGYGNY 255
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 40/51 (78%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVE 654
D ++LK++FSK+GE+ + TLK DP TGRSRGF F++FK+ ES++K + +
Sbjct: 66 DTTKKDLKDYFSKFGEVVDCTLKLDPMTGRSRGFGFVLFKEPESVDKVASQ 116
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 50/87 (57%)
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
+I+A K + GK+FVGGLS + +++K +F++FG +++ + D + + F F+ F
Sbjct: 45 RIDASKNEEDEGKMFVGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPMTGRSRGFGFVLF 104
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKA 260
+ V + + K+N K +D KKA
Sbjct: 105 KEPESVDKVASQKEHKLNGKVIDPKKA 131
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGV 503
E+ E+P + ++R+ FCFITF+ E V +++ I + ++K A K +
Sbjct: 166 EVESVELPMENKTNKRRGFCFITFKEEEPVKKIMEKKYHNIGLSKCEIKVAMSKEQYQQQ 225
Query: 504 R--GGRGGRGGRG-GRGGRMAGGYGGYGGY 530
+ GGRGG R GRGG GYG Y
Sbjct: 226 QYWGGRGGYSSRSRGRGGPNQNWNQGYGNY 255
Score = 43.1 bits (100), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D E+++E+F +GE+E+V L + T + RGF FI FK+ E ++K
Sbjct: 151 DTPEEKVREYFGAFGEVESVELPMENKTNKRRGFCFITFKEEEPVKK 197
>gi|395542045|ref|XP_003772945.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like
[Sarcophilus harrisii]
Length = 475
Score = 128 bits (322), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 66/155 (42%), Positives = 98/155 (63%), Gaps = 10/155 (6%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++L E+ S++GE+ + T+K+DP TGRSRGF F++FKD ASV+ V+ H ++ K
Sbjct: 217 KDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDA-----ASVDKVLELKEHKLDGK 271
Query: 174 KIEAKKAKAKSGK-----IFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNF 228
I+ K+AKA GK +FVGGLSP+ +E+IK +F FG I E+P D ++R+ F
Sbjct: 272 LIDPKRAKALKGKEPPKKVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGF 331
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
CFIT+ E V LL+N +I + ++K A PK
Sbjct: 332 CFITYTDEEPVKKLLENRYHQIGSGKCEIKVAQPK 366
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 36/47 (76%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D ++L E+ S++GE+ + T+K+DP TGRSRGF F++FKD S++K
Sbjct: 213 DTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDK 259
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 57/106 (53%), Gaps = 2/106 (1%)
Query: 157 ASVEDVIAEGN--HVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIET 214
A++EDV N KI A K + GK+F+GGLS + +++ + ++FG +++
Sbjct: 173 AAMEDVNEYSNMEEFAEGSKINASKNQQDDGKMFIGGLSWDTSKKDLTEYLSRFGEVVDC 232
Query: 215 EMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKA 260
+ D + + F F+ F+ + V +L+ + K++ K +D K+A
Sbjct: 233 TIKTDPVTGRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRA 278
Score = 47.8 bits (112), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D E++KE+F +GEIEN+ L D T RGF FI + D E ++K
Sbjct: 298 DTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPVKK 344
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 497
EI E+P D ++R+ FCFIT+ E V LL+N +I + ++K A PK
Sbjct: 313 EIENIELPMDTKTNERRGFCFITYTDEEPVKKLLENRYHQIGSGKCEIKVAQPK 366
>gi|443692084|gb|ELT93758.1| hypothetical protein CAPTEDRAFT_170758 [Capitella teleta]
Length = 238
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/141 (42%), Positives = 96/141 (68%), Gaps = 10/141 (7%)
Query: 115 ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNKK 174
++K++FSK+GE+ + TLK+D NTGRSRGF F+ F D+ V VI + H ++ K
Sbjct: 78 DMKDYFSKFGEVTDATLKTDQNTGRSRGFGFVTFVDS-----TCVNRVIEQTQHTLHGKN 132
Query: 175 IEAKKAKAKSG-----KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFC 229
I+ K+AKA+ G KIFVGGL PE+ ++EI+ HF+++G + E E+P+D+SK+QR+ FC
Sbjct: 133 IDPKRAKARPGREPVKKIFVGGLDPEVPEDEIRQHFSKYGKVEEVELPFDRSKNQRRFFC 192
Query: 230 FITFEHESVVIDLLKNPKQKI 250
F++F+ V L + ++ +
Sbjct: 193 FVSFDTGEAVDALCQESEKHV 213
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 50/82 (60%)
Query: 183 KSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDL 242
+S KIFVGGLS E +++K +F++FG + + + D++ + + F F+TF + V +
Sbjct: 61 ESRKIFVGGLSWETTVKDMKDYFSKFGEVTDATLKTDQNTGRSRGFGFVTFVDSTCVNRV 120
Query: 243 LKNPKQKINDKEVDVKKATPKP 264
++ + ++ K +D K+A +P
Sbjct: 121 IEQTQHTLHGKNIDPKRAKARP 142
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 33/43 (76%)
Query: 609 ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
++K++FSK+GE+ + TLK+D NTGRSRGF F+ F D+ + +
Sbjct: 78 DMKDYFSKFGEVTDATLKTDQNTGRSRGFGFVTFVDSTCVNRV 120
>gi|324501271|gb|ADY40568.1| RNA-binding protein squid [Ascaris suum]
Length = 303
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 66/159 (41%), Positives = 95/159 (59%), Gaps = 7/159 (4%)
Query: 107 GIVHKIT-EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
GI + +T E+L +FS++GE+ +K D NTGRSRGFAF+ F E+ + A +
Sbjct: 44 GIAYDVTNEDLCNYFSQFGEVAQAQVKFDRNTGRSRGFAFVEFATGEACKAA-----LGT 98
Query: 166 GNHVINNKKIEAKKAKAKSGK-IFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQ 224
+ NK+IE K AK++ K +FVGGL + +E+++AHFAQ+G + + E P+DK
Sbjct: 99 REQTLKNKQIEVKPAKSRENKKVFVGGLPADFPEEDLRAHFAQYGKVEDIEWPFDKQTKA 158
Query: 225 RKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
R+NF FI FE E PKQ +E DVKKA P+
Sbjct: 159 RRNFAFIVFEEEESADRASSTPKQTFGSRECDVKKAVPQ 197
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 75/176 (42%), Gaps = 20/176 (11%)
Query: 2 TAESQDVEMTTTENGQENGGAPVSVKDD------DRKLFCPLSSYLELDYLQLWQYFDWV 55
T E+Q + ENG NG + V D D+K+F +Y ++ L YF
Sbjct: 3 TQENQAHQENQKENGTVNGASGGEVAKDSGKGNEDKKIFVGGIAY-DVTNEDLCNYFSQF 61
Query: 56 SSSFSENCLLEDSIGKPLTV---------SCSHHYYLFDQILRTHFFYIMEAK---NKMV 103
+ + G+ +C +Q L+ + AK NK V
Sbjct: 62 GEVAQAQVKFDRNTGRSRGFAFVEFATGEACKAALGTREQTLKNKQIEVKPAKSRENKKV 121
Query: 104 SHPGIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKAS 158
G+ EE L+ HF++YG++E++ D T R FAFIVF++ ES ++AS
Sbjct: 122 FVGGLPADFPEEDLRAHFAQYGKVEDIEWPFDKQTKARRNFAFIVFEEEESADRAS 177
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 29/54 (53%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 497
++ + E P+DK R+NF FI FE E PKQ +E DVKKA P+
Sbjct: 144 KVEDIEWPFDKQTKARRNFAFIVFEEEESADRASSTPKQTFGSRECDVKKAVPQ 197
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 47/87 (54%), Gaps = 4/87 (4%)
Query: 570 SCSHYHYLFDQNLRTHYFYIVEAK---NKMVSHPGI-VDKITEELKEHFSKYGEIENVTL 625
+C +Q L+ + AK NK V G+ D E+L+ HF++YG++E++
Sbjct: 91 ACKAALGTREQTLKNKQIEVKPAKSRENKKVFVGGLPADFPEEDLRAHFAQYGKVEDIEW 150
Query: 626 KSDPNTGRSRGFAFIVFKDTESLEKAS 652
D T R FAFIVF++ ES ++AS
Sbjct: 151 PFDKQTKARRNFAFIVFEEEESADRAS 177
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 31/48 (64%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
D E+L +FS++GE+ +K D NTGRSRGFAF+ F E+ + A
Sbjct: 48 DVTNEDLCNYFSQFGEVAQAQVKFDRNTGRSRGFAFVEFATGEACKAA 95
>gi|410903806|ref|XP_003965384.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0-like isoform
2 [Takifugu rubripes]
Length = 320
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/198 (39%), Positives = 114/198 (57%), Gaps = 21/198 (10%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++LK++F KYGE+ + TLK DP TGRSRGF F++FK+ ES+EK V ++ H +N K
Sbjct: 70 KDLKDYFCKYGEVVDCTLKLDPITGRSRGFGFVLFKEPESVEK-----VASQKEHKLNGK 124
Query: 174 KIEAKKAKAKSG-----KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNF 228
I+ KKAKA G KIFVGGLSP+ +E+++ +F FG + E+P + ++R+ F
Sbjct: 125 VIDPKKAKAMKGKEPVKKIFVGGLSPDTPEEKVREYFGAFGEVESIELPMETKTNKRRGF 184
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGVRGGRGGRGGRGGRGGRMAG 288
CFITF+ E V +++ I + ++K A K E + + GGRGG R G
Sbjct: 185 CFITFKEEEPVKCIMEKKFHNIGLSKCEIKVAVSK-EQYQQQQYWGGRGGYSSRARGRGG 243
Query: 289 GYG----------GYGGY 296
G+ GYG Y
Sbjct: 244 GWNIFSPNQNWNQGYGNY 261
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 39/51 (76%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVE 654
D ++LK++F KYGE+ + TLK DP TGRSRGF F++FK+ ES+EK + +
Sbjct: 66 DTTKKDLKDYFCKYGEVVDCTLKLDPITGRSRGFGFVLFKEPESVEKVASQ 116
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 49/87 (56%)
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
+I+A K + GK+FVGGLS + +++K +F ++G +++ + D + + F F+ F
Sbjct: 45 RIDASKNEEDEGKMFVGGLSWDTTKKDLKDYFCKYGEVVDCTLKLDPITGRSRGFGFVLF 104
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKA 260
+ V + + K+N K +D KKA
Sbjct: 105 KEPESVEKVASQKEHKLNGKVIDPKKA 131
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 30/46 (65%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLE 649
D E+++E+F +GE+E++ L + T + RGF FI FK+ E ++
Sbjct: 151 DTPEEKVREYFGAFGEVESIELPMETKTNKRRGFCFITFKEEEPVK 196
Score = 40.0 bits (92), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 45/97 (46%), Gaps = 11/97 (11%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGV 503
E+ E+P + ++R+ FCFITF+ E V +++ I + ++K A K E +
Sbjct: 166 EVESIELPMETKTNKRRGFCFITFKEEEPVKCIMEKKFHNIGLSKCEIKVAVSK-EQYQQ 224
Query: 504 RGGRGGRGGRGGRGGRMAGGYG----------GYGGY 530
+ GGRGG R GG+ GYG Y
Sbjct: 225 QQYWGGRGGYSSRARGRGGGWNIFSPNQNWNQGYGNY 261
>gi|126330931|ref|XP_001362287.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D [Monodelphis
domestica]
Length = 417
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 66/155 (42%), Positives = 98/155 (63%), Gaps = 10/155 (6%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++L E+ S++GE+ + T+K+DP TGRSRGF F++FKD ASV+ V+ H ++ K
Sbjct: 159 KDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDA-----ASVDKVLELKEHKLDGK 213
Query: 174 KIEAKKAKAKSGK-----IFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNF 228
I+ K+AKA GK +FVGGLSP+ +E+IK +F FG I E+P D ++R+ F
Sbjct: 214 LIDPKRAKALKGKEPPKKVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGF 273
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
CFIT+ E V LL+N +I + ++K A PK
Sbjct: 274 CFITYTDEEPVKKLLENRYHQIGSGKCEIKVAQPK 308
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 36/47 (76%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D ++L E+ S++GE+ + T+K+DP TGRSRGF F++FKD S++K
Sbjct: 155 DTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDK 201
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 57/106 (53%), Gaps = 2/106 (1%)
Query: 157 ASVEDVIAEGN--HVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIET 214
A++EDV N KI A K + GK+F+GGLS + +++ + ++FG +++
Sbjct: 115 AAMEDVNEYSNMEEFAEGSKINASKNQQDDGKMFIGGLSWDTSKKDLTEYLSRFGEVVDC 174
Query: 215 EMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKA 260
+ D + + F F+ F+ + V +L+ + K++ K +D K+A
Sbjct: 175 TIKTDPVTGRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRA 220
Score = 47.8 bits (112), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D E++KE+F +GEIEN+ L D T RGF FI + D E ++K
Sbjct: 240 DTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPVKK 286
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 497
EI E+P D ++R+ FCFIT+ E V LL+N +I + ++K A PK
Sbjct: 255 EIENIELPMDTKTNERRGFCFITYTDEEPVKKLLENRYHQIGSGKCEIKVAQPK 308
>gi|327273004|ref|XP_003221273.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0-like [Anolis
carolinensis]
Length = 334
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/191 (39%), Positives = 113/191 (59%), Gaps = 16/191 (8%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++LK++F+K+GE+ + TLK DP TGRSRGF FI+FK+ ES++K V+ + H +N K
Sbjct: 91 KDLKDYFTKFGEVVDCTLKLDPITGRSRGFGFILFKEAESVDK-----VMDQKEHKLNGK 145
Query: 174 KIEAKKAKAKS-----GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNF 228
I+ K+AKA KIFVGGLSP+ +E+I+ +F FG + E+P D ++R+ F
Sbjct: 146 VIDPKRAKAMKTKEPIKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGF 205
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKP-----EPFGVRGGRGGRG-GRGGR 282
CFITF+ E V +++ + + ++K A K + +G RGG GR GRGG
Sbjct: 206 CFITFKDEEPVKKIMEKKYHNVGLSKCEIKVAMSKEQYQQQQQWGARGGFPGRARGRGGP 265
Query: 283 GGRMAGGYGGY 293
GY Y
Sbjct: 266 NQSWNPGYSNY 276
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 38/48 (79%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
D ++LK++F+K+GE+ + TLK DP TGRSRGF FI+FK+ ES++K
Sbjct: 87 DTTKKDLKDYFTKFGEVVDCTLKLDPITGRSRGFGFILFKEAESVDKV 134
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 45/77 (58%)
Query: 184 SGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLL 243
+GK+F+GGLS + +++K +F +FG +++ + D + + F FI F+ V ++
Sbjct: 76 NGKMFIGGLSWDTTKKDLKDYFTKFGEVVDCTLKLDPITGRSRGFGFILFKEAESVDKVM 135
Query: 244 KNPKQKINDKEVDVKKA 260
+ K+N K +D K+A
Sbjct: 136 DQKEHKLNGKVIDPKRA 152
Score = 46.2 bits (108), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 31/47 (65%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D E+++E+F +GE+E++ L D T + RGF FI FKD E ++K
Sbjct: 172 DTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKDEEPVKK 218
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 44/90 (48%), Gaps = 6/90 (6%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKP----- 498
E+ E+P D ++R+ FCFITF+ E V +++ + + ++K A K
Sbjct: 187 EVESIELPMDNKTNKRRGFCFITFKDEEPVKKIMEKKYHNVGLSKCEIKVAMSKEQYQQQ 246
Query: 499 EPFGVRGGRGGRG-GRGGRGGRMAGGYGGY 527
+ +G RGG GR GRGG GY Y
Sbjct: 247 QQWGARGGFPGRARGRGGPNQSWNPGYSNY 276
>gi|410292486|gb|JAA24843.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa) [Pan troglodytes]
Length = 355
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/200 (39%), Positives = 119/200 (59%), Gaps = 19/200 (9%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++LK++FSK+GE+ + TLK DP TGRSRGF F++FK++ES++K V+ + H +N K
Sbjct: 111 KDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDK-----VMDQKEHKLNGK 165
Query: 174 KIEAKKAKAKS-----GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNF 228
I+ K+AKA KIFVGGLSP+ +E+I+ +F FG + E+P D ++R+ F
Sbjct: 166 VIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGF 225
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKP-----EPFGVRGGRGGRG-GRGGR 282
CFITF+ E V +++ + + ++K A K + +G RGG GR GRGG
Sbjct: 226 CFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSKEQYQQQQQWGSRGGFAGRARGRGGD 285
Query: 283 GGR-MAGGYGGYGGYGGGYG 301
+ GY Y + GYG
Sbjct: 286 PSQNWNQGYSNY--WNQGYG 303
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 39/47 (82%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D ++LK++FSK+GE+ + TLK DP TGRSRGF F++FK++ES++K
Sbjct: 107 DTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDK 153
Score = 52.4 bits (124), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 54/96 (56%)
Query: 165 EGNHVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQ 224
EG+ + + EA A+ + K+F+GGLS + +++K +F++FG +++ + D +
Sbjct: 77 EGHSNSSPRHSEAATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGR 136
Query: 225 RKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKA 260
+ F F+ F+ V ++ + K+N K +D K+A
Sbjct: 137 SRGFGFVLFKESESVDKVMDQKEHKLNGKVIDPKRA 172
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 49/99 (49%), Gaps = 9/99 (9%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKP----- 498
E+ E+P D ++R+ FCFITF+ E V +++ + + ++K A K
Sbjct: 207 EVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSKEQYQQQ 266
Query: 499 EPFGVRGGRGGRG-GRGGRGGR-MAGGYGGYGGYGGGYG 535
+ +G RGG GR GRGG + GY Y + GYG
Sbjct: 267 QQWGSRGGFAGRARGRGGDPSQNWNQGYSNY--WNQGYG 303
Score = 43.9 bits (102), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D E+++E+F +GE+E++ L D T + RGF FI FK+ E ++K
Sbjct: 192 DTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 238
>gi|410292490|gb|JAA24845.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa) [Pan troglodytes]
Length = 336
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/179 (40%), Positives = 111/179 (62%), Gaps = 16/179 (8%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++LK++FSK+GE+ + TLK DP TGRSRGF F++FK++ES++K V+ + H +N K
Sbjct: 92 KDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDK-----VMDQKEHKLNGK 146
Query: 174 KIEAKKAKAKS-----GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNF 228
I+ K+AKA KIFVGGLSP+ +E+I+ +F FG + E+P D ++R+ F
Sbjct: 147 VIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGF 206
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKP-----EPFGVRGGRGGRG-GRGG 281
CFITF+ E V +++ + + ++K A K + +G RGG GR GRGG
Sbjct: 207 CFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSKEQYQQQQQWGSRGGFAGRARGRGG 265
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 39/47 (82%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D ++LK++FSK+GE+ + TLK DP TGRSRGF F++FK++ES++K
Sbjct: 88 DTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDK 134
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 51/87 (58%)
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
KI+A K + GK+F+GGLS + +++K +F++FG +++ + D + + F F+ F
Sbjct: 67 KIDASKNEEDEGKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLF 126
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKA 260
+ V ++ + K+N K +D K+A
Sbjct: 127 KESESVDKVMDQKEHKLNGKVIDPKRA 153
Score = 44.3 bits (103), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D E+++E+F +GE+E++ L D T + RGF FI FK+ E ++K
Sbjct: 173 DTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 219
Score = 43.9 bits (102), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 6/78 (7%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKP----- 498
E+ E+P D ++R+ FCFITF+ E V +++ + + ++K A K
Sbjct: 188 EVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSKEQYQQQ 247
Query: 499 EPFGVRGGRGGRG-GRGG 515
+ +G RGG GR GRGG
Sbjct: 248 QQWGSRGGFAGRARGRGG 265
>gi|224049399|ref|XP_002190694.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 1
[Taeniopygia guttata]
gi|449499942|ref|XP_004175399.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 [Taeniopygia
guttata]
Length = 318
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 79/199 (39%), Positives = 117/199 (58%), Gaps = 17/199 (8%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++LK++FSK+GE+ + TLK DP TGRSRGF F++FK++ES++K V+ + H +N K
Sbjct: 74 KDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDK-----VMDQKEHKLNGK 128
Query: 174 KIEAKKAKAKS-----GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNF 228
I+ K+AKA KIFVGGLSP+ +E+I+ +F FG + E+P D ++R+ F
Sbjct: 129 VIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGF 188
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKP-----EPFGVRGGRGGRGGRGGRG 283
CFITF+ E V +++ + + ++K A K + +G RGG GR RG G
Sbjct: 189 CFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSKEQYQQQQQWGSRGGFVGR-ARGRSG 247
Query: 284 GRMAGGYGGYGGY-GGGYG 301
G GY Y GYG
Sbjct: 248 GPSQSWNQGYSNYWNQGYG 266
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 39/48 (81%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
D ++LK++FSK+GE+ + TLK DP TGRSRGF F++FK++ES++K
Sbjct: 70 DTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKV 117
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 51/87 (58%)
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
KI+A K + GK+F+GGLS + +++K +F++FG +++ + D + + F F+ F
Sbjct: 49 KIDASKNEEDEGKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLF 108
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKA 260
+ V ++ + K+N K +D K+A
Sbjct: 109 KESESVDKVMDQKEHKLNGKVIDPKRA 135
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D E+++E+F +GE+E++ L D T + RGF FI FK+ E ++K
Sbjct: 155 DTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 201
Score = 43.1 bits (100), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 47/98 (47%), Gaps = 7/98 (7%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKP----- 498
E+ E+P D ++R+ FCFITF+ E V +++ + + ++K A K
Sbjct: 170 EVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSKEQYQQQ 229
Query: 499 EPFGVRGGRGGRGGRGGRGGRMAGGYGGYGGY-GGGYG 535
+ +G RGG GR RG GG GY Y GYG
Sbjct: 230 QQWGSRGGFVGR-ARGRSGGPSQSWNQGYSNYWNQGYG 266
>gi|326918700|ref|XP_003205626.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like
[Meleagris gallopavo]
Length = 264
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 66/155 (42%), Positives = 98/155 (63%), Gaps = 10/155 (6%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++L E+ S++GE+ + T+K+DP TGRSRGF F++FKD ASVE V+ H ++ K
Sbjct: 13 KDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDA-----ASVEKVLELKEHKLDGK 67
Query: 174 KIEAKKAKAKSGK-----IFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNF 228
I+ K+AKA GK +FVGGLSP+ +E+IK +F FG I E+P D ++R+ F
Sbjct: 68 LIDPKRAKALKGKEPPKKVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGF 127
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
CFIT+ E V LL++ +I + ++K A PK
Sbjct: 128 CFITYTDEEPVKKLLESRYHQIGSGKCEIKVAQPK 162
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 36/48 (75%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
D ++L E+ S++GE+ + T+K+DP TGRSRGF F++FKD S+EK
Sbjct: 9 DTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVEKV 56
Score = 47.0 bits (110), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D E++KE+F +GEIEN+ L D T RGF FI + D E ++K
Sbjct: 94 DTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPVKK 140
Score = 42.7 bits (99), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 31/54 (57%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 497
EI E+P D ++R+ FCFIT+ E V LL++ +I + ++K A PK
Sbjct: 109 EIENIELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIKVAQPK 162
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 18/74 (24%), Positives = 43/74 (58%)
Query: 187 IFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNP 246
+F+GGLS + +++ + ++FG +++ + D + + F F+ F+ + V +L+
Sbjct: 1 MFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVEKVLELK 60
Query: 247 KQKINDKEVDVKKA 260
+ K++ K +D K+A
Sbjct: 61 EHKLDGKLIDPKRA 74
>gi|449276581|gb|EMC85043.1| Heterogeneous nuclear ribonucleoprotein D-like protein, partial
[Columba livia]
Length = 271
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 66/155 (42%), Positives = 98/155 (63%), Gaps = 10/155 (6%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++L E+ S++GE+ + T+K+DP TGRSRGF F++FKD ASVE V+ H ++ K
Sbjct: 14 KDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDA-----ASVEKVLELKEHKLDGK 68
Query: 174 KIEAKKAKAKSGK-----IFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNF 228
I+ K+AKA GK +FVGGLSP+ +E+IK +F FG I E+P D ++R+ F
Sbjct: 69 LIDPKRAKALKGKEPPKKVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGF 128
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
CFIT+ E V LL++ +I + ++K A PK
Sbjct: 129 CFITYTDEEPVKKLLESRYHQIGSGKCEIKVAQPK 163
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 36/48 (75%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
D ++L E+ S++GE+ + T+K+DP TGRSRGF F++FKD S+EK
Sbjct: 10 DTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVEKV 57
Score = 47.0 bits (110), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D E++KE+F +GEIEN+ L D T RGF FI + D E ++K
Sbjct: 95 DTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPVKK 141
Score = 43.5 bits (101), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 44/75 (58%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+F+GGLS + +++ + ++FG +++ + D + + F F+ F+ + V +L+
Sbjct: 1 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVEKVLEL 60
Query: 246 PKQKINDKEVDVKKA 260
+ K++ K +D K+A
Sbjct: 61 KEHKLDGKLIDPKRA 75
Score = 42.7 bits (99), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 31/54 (57%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 497
EI E+P D ++R+ FCFIT+ E V LL++ +I + ++K A PK
Sbjct: 110 EIENIELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIKVAQPK 163
>gi|327272896|ref|XP_003221220.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like [Anolis
carolinensis]
Length = 311
Score = 126 bits (317), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 66/155 (42%), Positives = 98/155 (63%), Gaps = 10/155 (6%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++L E+ S++GE+ + T+K+DP TGRSRGF F++FKD ASVE V+ H ++ K
Sbjct: 54 KDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDA-----ASVEKVLELKEHKLDGK 108
Query: 174 KIEAKKAKAKSGK-----IFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNF 228
I+ K+AKA GK +FVGGLSP+ +E+IK +F FG I E+P D ++R+ F
Sbjct: 109 LIDPKRAKALKGKEPPKKVFVGGLSPDTSEEQIKEYFGGFGEIENIELPMDTKTNERRGF 168
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
CFIT+ E V LL++ +I + ++K A PK
Sbjct: 169 CFITYSDEEPVKKLLESRYHQIGSGKCEIKVAQPK 203
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 36/47 (76%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D ++L E+ S++GE+ + T+K+DP TGRSRGF F++FKD S+EK
Sbjct: 50 DTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVEK 96
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 56/101 (55%), Gaps = 6/101 (5%)
Query: 160 EDVIAEGNHVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYD 219
+D AEG+ KI A K + GK+F+GGLS + +++ + ++FG +++ + D
Sbjct: 21 QDDFAEGS------KINASKNQQDDGKMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTD 74
Query: 220 KSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKA 260
+ + F F+ F+ + V +L+ + K++ K +D K+A
Sbjct: 75 PVTGRSRGFGFVLFKDAASVEKVLELKEHKLDGKLIDPKRA 115
Score = 47.0 bits (110), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D E++KE+F +GEIEN+ L D T RGF FI + D E ++K
Sbjct: 135 DTSEEQIKEYFGGFGEIENIELPMDTKTNERRGFCFITYSDEEPVKK 181
Score = 42.7 bits (99), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 31/54 (57%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 497
EI E+P D ++R+ FCFIT+ E V LL++ +I + ++K A PK
Sbjct: 150 EIENIELPMDTKTNERRGFCFITYSDEEPVKKLLESRYHQIGSGKCEIKVAQPK 203
>gi|76096336|ref|NP_001028868.1| heterogeneous nuclear ribonucleoprotein D-like [Rattus norvegicus]
gi|123783017|sp|Q3SWU3.1|HNRDL_RAT RecName: Full=Heterogeneous nuclear ribonucleoprotein D-like;
Short=hnRNP D-like; Short=hnRNP DL
gi|74356265|gb|AAI04684.1| Heterogeneous nuclear ribonucleoprotein D-like [Rattus norvegicus]
Length = 322
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 65/155 (41%), Positives = 98/155 (63%), Gaps = 10/155 (6%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++L E+ S++GE+ + T+K+DP TGRSRGF F++FKD ASV+ V+ H ++ K
Sbjct: 65 KDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDA-----ASVDKVLELKEHKLDGK 119
Query: 174 KIEAKKAKAKSGK-----IFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNF 228
I+ K+AKA GK +FVGGLSP+ +E+IK +F FG I E+P D ++R+ F
Sbjct: 120 LIDPKRAKALKGKEPPKKVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGF 179
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
CFIT+ E V LL++ +I + ++K A PK
Sbjct: 180 CFITYTDEEPVKKLLESRYHQIGSGKCEIKVAQPK 214
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 39/57 (68%)
Query: 594 NKMVSHPGIVDKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
NKM D ++L E+ S++GE+ + T+K+DP TGRSRGF F++FKD S++K
Sbjct: 51 NKMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDK 107
Score = 47.4 bits (111), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D E++KE+F +GEIEN+ L D T RGF FI + D E ++K
Sbjct: 146 DTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPVKK 192
Score = 43.9 bits (102), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 44/75 (58%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+F+GGLS + +++ + ++FG +++ + D + + F F+ F+ + V +L+
Sbjct: 52 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLEL 111
Query: 246 PKQKINDKEVDVKKA 260
+ K++ K +D K+A
Sbjct: 112 KEHKLDGKLIDPKRA 126
Score = 42.4 bits (98), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 31/54 (57%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 497
EI E+P D ++R+ FCFIT+ E V LL++ +I + ++K A PK
Sbjct: 161 EIENIELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIKVAQPK 214
>gi|71896741|ref|NP_001026313.1| heterogeneous nuclear ribonucleoprotein D-like [Gallus gallus]
gi|82233707|sp|Q5ZI72.1|HNRDL_CHICK RecName: Full=Heterogeneous nuclear ribonucleoprotein D-like;
Short=hnRNP D-like; Short=hnRNP DL
gi|53136484|emb|CAG32571.1| hypothetical protein RCJMB04_29l7 [Gallus gallus]
Length = 301
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 66/155 (42%), Positives = 98/155 (63%), Gaps = 10/155 (6%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++L E+ S++GE+ + T+K+DP TGRSRGF F++FKD ASVE V+ H ++ K
Sbjct: 44 KDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDA-----ASVEKVLELKEHKLDGK 98
Query: 174 KIEAKKAKAKSGK-----IFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNF 228
I+ K+AKA GK +FVGGLSP+ +E+IK +F FG I E+P D ++R+ F
Sbjct: 99 LIDPKRAKALKGKEPPKKVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGF 158
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
CFIT+ E V LL++ +I + ++K A PK
Sbjct: 159 CFITYTDEEPVKKLLESRYHQIGSGKCEIKVAQPK 193
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 36/47 (76%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D ++L E+ S++GE+ + T+K+DP TGRSRGF F++FKD S+EK
Sbjct: 40 DTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVEK 86
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 50/87 (57%)
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
KI A K + GK+F+GGLS + +++ + ++FG +++ + D + + F F+ F
Sbjct: 19 KINASKNQQDDGKMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLF 78
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKA 260
+ + V +L+ + K++ K +D K+A
Sbjct: 79 KDAASVEKVLELKEHKLDGKLIDPKRA 105
Score = 47.0 bits (110), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D E++KE+F +GEIEN+ L D T RGF FI + D E ++K
Sbjct: 125 DTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPVKK 171
Score = 42.4 bits (98), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 31/54 (57%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 497
EI E+P D ++R+ FCFIT+ E V LL++ +I + ++K A PK
Sbjct: 140 EIENIELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIKVAQPK 193
>gi|395834185|ref|XP_003790092.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 1
[Otolemur garnettii]
gi|395834187|ref|XP_003790093.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 2
[Otolemur garnettii]
Length = 418
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 65/155 (41%), Positives = 98/155 (63%), Gaps = 10/155 (6%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++L E+ S++GE+ + T+K+DP TGRSRGF F++FKD ASV+ V+ H ++ K
Sbjct: 162 KDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDA-----ASVDKVLELKEHKLDGK 216
Query: 174 KIEAKKAKAKSGK-----IFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNF 228
I+ K+AKA GK +FVGGLSP+ +E+IK +F FG I E+P D ++R+ F
Sbjct: 217 LIDPKRAKALKGKEPPKKVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGF 276
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
CFIT+ E V LL++ +I + ++K A PK
Sbjct: 277 CFITYTDEEPVKKLLESRYHQIGSGKCEIKVAQPK 311
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 36/47 (76%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D ++L E+ S++GE+ + T+K+DP TGRSRGF F++FKD S++K
Sbjct: 158 DTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDK 204
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 57/106 (53%), Gaps = 2/106 (1%)
Query: 157 ASVEDVIAEGN--HVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIET 214
A++ED+ N KI A K + GK+F+GGLS + +++ + ++FG +++
Sbjct: 118 ATMEDMNEYSNIEEFAEGSKINASKNQQDDGKMFIGGLSWDTSKKDLTEYLSRFGEVVDC 177
Query: 215 EMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKA 260
+ D + + F F+ F+ + V +L+ + K++ K +D K+A
Sbjct: 178 TIKTDPVTGRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRA 223
Score = 47.8 bits (112), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D E++KE+F +GEIEN+ L D T RGF FI + D E ++K
Sbjct: 243 DTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPVKK 289
Score = 42.4 bits (98), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 31/54 (57%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 497
EI E+P D ++R+ FCFIT+ E V LL++ +I + ++K A PK
Sbjct: 258 EIENIELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIKVAQPK 311
>gi|350540024|ref|NP_001232117.1| heterogeneous nuclear ribonucleoprotein D-like [Taeniopygia
guttata]
gi|197129483|gb|ACH45981.1| putative heterogeneous nuclear ribonucleoprotein D-like variant 1
[Taeniopygia guttata]
Length = 301
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 66/155 (42%), Positives = 97/155 (62%), Gaps = 10/155 (6%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++L E+ S++GE+ + T+K+DP TGRSRGF F++FKD ASVE V+ H ++ K
Sbjct: 44 KDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDA-----ASVEKVLELKEHKLDGK 98
Query: 174 KIEAKKAKAKSGK-----IFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNF 228
I+ K+AKA GK +FVGGLSP+ +E+IK +F FG I E+P D + R+ F
Sbjct: 99 LIDPKRAKALKGKEPPKKVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNXRRGF 158
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
CFIT+ E V LL++ +I + ++K A PK
Sbjct: 159 CFITYTDEEPVKKLLESRYHQIGSGKCEIKVAQPK 193
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 36/47 (76%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D ++L E+ S++GE+ + T+K+DP TGRSRGF F++FKD S+EK
Sbjct: 40 DTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVEK 86
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 60/109 (55%), Gaps = 6/109 (5%)
Query: 152 ESLEKASVEDVIAEGNHVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNI 211
++ E + ++ AEG+ KI A K + GK+F+GGLS + +++ + ++FG +
Sbjct: 3 DATEMSGGQEEFAEGS------KINASKNQQDDGKMFIGGLSWDTSKKDLTEYLSRFGEV 56
Query: 212 IETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKA 260
++ + D + + F F+ F+ + V +L+ + K++ K +D K+A
Sbjct: 57 VDCTIKTDPVTGRSRGFGFVLFKDAASVEKVLELKEHKLDGKLIDPKRA 105
Score = 46.6 bits (109), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D E++KE+F +GEIEN+ L D T RGF FI + D E ++K
Sbjct: 125 DTSEEQIKEYFGAFGEIENIELPMDTKTNXRRGFCFITYTDEEPVKK 171
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 30/54 (55%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 497
EI E+P D + R+ FCFIT+ E V LL++ +I + ++K A PK
Sbjct: 140 EIENIELPMDTKTNXRRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIKVAQPK 193
>gi|148664250|ref|NP_057899.2| heterogeneous nuclear ribonucleoprotein D-like [Mus musculus]
Length = 420
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 65/155 (41%), Positives = 98/155 (63%), Gaps = 10/155 (6%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++L E+ S++GE+ + T+K+DP TGRSRGF F++FKD ASV+ V+ H ++ K
Sbjct: 162 KDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDA-----ASVDKVLELKEHKLDGK 216
Query: 174 KIEAKKAKAKSGK-----IFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNF 228
I+ K+AKA GK +FVGGLSP+ +E+IK +F FG I E+P D ++R+ F
Sbjct: 217 LIDPKRAKALKGKEPPKKVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGF 276
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
CFIT+ E V LL++ +I + ++K A PK
Sbjct: 277 CFITYTDEEPVKKLLESRYHQIGSGKCEIKVAQPK 311
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 36/47 (76%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D ++L E+ S++GE+ + T+K+DP TGRSRGF F++FKD S++K
Sbjct: 158 DTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDK 204
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 57/106 (53%), Gaps = 2/106 (1%)
Query: 157 ASVEDVIAEGN--HVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIET 214
A++ED+ N KI A K + GK+F+GGLS + +++ + ++FG +++
Sbjct: 118 ATMEDMNEYSNIEEFAEGSKINASKNQQDDGKMFIGGLSWDTSKKDLTEYLSRFGEVVDC 177
Query: 215 EMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKA 260
+ D + + F F+ F+ + V +L+ + K++ K +D K+A
Sbjct: 178 TIKTDPVTGRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRA 223
Score = 47.4 bits (111), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D E++KE+F +GEIEN+ L D T RGF FI + D E ++K
Sbjct: 243 DTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPVKK 289
Score = 42.7 bits (99), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 31/54 (57%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 497
EI E+P D ++R+ FCFIT+ E V LL++ +I + ++K A PK
Sbjct: 258 EIENIELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIKVAQPK 311
>gi|395834189|ref|XP_003790094.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 3
[Otolemur garnettii]
Length = 363
Score = 125 bits (314), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 65/155 (41%), Positives = 98/155 (63%), Gaps = 10/155 (6%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++L E+ S++GE+ + T+K+DP TGRSRGF F++FKD ASV+ V+ H ++ K
Sbjct: 162 KDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDA-----ASVDKVLELKEHKLDGK 216
Query: 174 KIEAKKAKAKSGK-----IFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNF 228
I+ K+AKA GK +FVGGLSP+ +E+IK +F FG I E+P D ++R+ F
Sbjct: 217 LIDPKRAKALKGKEPPKKVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGF 276
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
CFIT+ E V LL++ +I + ++K A PK
Sbjct: 277 CFITYTDEEPVKKLLESRYHQIGSGKCEIKVAQPK 311
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 36/47 (76%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D ++L E+ S++GE+ + T+K+DP TGRSRGF F++FKD S++K
Sbjct: 158 DTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDK 204
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 57/106 (53%), Gaps = 2/106 (1%)
Query: 157 ASVEDVIAEGN--HVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIET 214
A++ED+ N KI A K + GK+F+GGLS + +++ + ++FG +++
Sbjct: 118 ATMEDMNEYSNIEEFAEGSKINASKNQQDDGKMFIGGLSWDTSKKDLTEYLSRFGEVVDC 177
Query: 215 EMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKA 260
+ D + + F F+ F+ + V +L+ + K++ K +D K+A
Sbjct: 178 TIKTDPVTGRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRA 223
Score = 47.4 bits (111), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D E++KE+F +GEIEN+ L D T RGF FI + D E ++K
Sbjct: 243 DTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPVKK 289
Score = 42.0 bits (97), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 31/54 (57%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 497
EI E+P D ++R+ FCFIT+ E V LL++ +I + ++K A PK
Sbjct: 258 EIENIELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIKVAQPK 311
>gi|402869385|ref|XP_003898743.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 1
[Papio anubis]
gi|402869387|ref|XP_003898744.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 2
[Papio anubis]
Length = 420
Score = 125 bits (314), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 65/155 (41%), Positives = 98/155 (63%), Gaps = 10/155 (6%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++L E+ S++GE+ + T+K+DP TGRSRGF F++FKD ASV+ V+ H ++ K
Sbjct: 162 KDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDA-----ASVDKVLELKEHKLDGK 216
Query: 174 KIEAKKAKAKSGK-----IFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNF 228
I+ K+AKA GK +FVGGLSP+ +E+IK +F FG I E+P D ++R+ F
Sbjct: 217 LIDPKRAKALKGKEPPKKVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGF 276
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
CFIT+ E V LL++ +I + ++K A PK
Sbjct: 277 CFITYTDEEPVKKLLESRYHQIGSGKCEIKVAQPK 311
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 36/47 (76%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D ++L E+ S++GE+ + T+K+DP TGRSRGF F++FKD S++K
Sbjct: 158 DTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDK 204
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 57/106 (53%), Gaps = 2/106 (1%)
Query: 157 ASVEDVIAEGN--HVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIET 214
A++ED+ N KI A K + GK+F+GGLS + +++ + ++FG +++
Sbjct: 118 ATMEDMNEYSNIEEFAEGSKINASKNQQDDGKMFIGGLSWDTSKKDLTEYLSRFGEVVDC 177
Query: 215 EMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKA 260
+ D + + F F+ F+ + V +L+ + K++ K +D K+A
Sbjct: 178 TIKTDPVTGRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRA 223
Score = 47.8 bits (112), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D E++KE+F +GEIEN+ L D T RGF FI + D E ++K
Sbjct: 243 DTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPVKK 289
Score = 42.4 bits (98), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 31/54 (57%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 497
EI E+P D ++R+ FCFIT+ E V LL++ +I + ++K A PK
Sbjct: 258 EIENIELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIKVAQPK 311
>gi|39644771|gb|AAH07392.2| HNRPDL protein, partial [Homo sapiens]
Length = 415
Score = 125 bits (314), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 65/155 (41%), Positives = 98/155 (63%), Gaps = 10/155 (6%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++L E+ S++GE+ + T+K+DP TGRSRGF F++FKD ASV+ V+ H ++ K
Sbjct: 157 KDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDA-----ASVDKVLELKEHKLDGK 211
Query: 174 KIEAKKAKAKSGK-----IFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNF 228
I+ K+AKA GK +FVGGLSP+ +E+IK +F FG I E+P D ++R+ F
Sbjct: 212 LIDPKRAKALKGKEPPKKVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGF 271
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
CFIT+ E V LL++ +I + ++K A PK
Sbjct: 272 CFITYTDEEPVKKLLESRYHQIGSGKCEIKVAQPK 306
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 36/47 (76%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D ++L E+ S++GE+ + T+K+DP TGRSRGF F++FKD S++K
Sbjct: 153 DTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDK 199
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 50/87 (57%)
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
KI A K + GK+F+GGLS + +++ + ++FG +++ + D + + F F+ F
Sbjct: 132 KINASKNQQDDGKMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLF 191
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKA 260
+ + V +L+ + K++ K +D K+A
Sbjct: 192 KDAASVDKVLELKEHKLDGKLIDPKRA 218
Score = 47.4 bits (111), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D E++KE+F +GEIEN+ L D T RGF FI + D E ++K
Sbjct: 238 DTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPVKK 284
Score = 42.4 bits (98), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 31/54 (57%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 497
EI E+P D ++R+ FCFIT+ E V LL++ +I + ++K A PK
Sbjct: 253 EIENIELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIKVAQPK 306
>gi|296196170|ref|XP_002745712.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D isoform 1
[Callithrix jacchus]
gi|390460703|ref|XP_003732527.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D isoform 2
[Callithrix jacchus]
Length = 420
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 65/155 (41%), Positives = 98/155 (63%), Gaps = 10/155 (6%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++L E+ S++GE+ + T+K+DP TGRSRGF F++FKD ASV+ V+ H ++ K
Sbjct: 162 KDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDA-----ASVDKVLELKEHKLDGK 216
Query: 174 KIEAKKAKAKSGK-----IFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNF 228
I+ K+AKA GK +FVGGLSP+ +E+IK +F FG I E+P D ++R+ F
Sbjct: 217 LIDPKRAKALKGKEPPKKVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGF 276
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
CFIT+ E V LL++ +I + ++K A PK
Sbjct: 277 CFITYTDEEPVKKLLESRYHQIGSGKCEIKVAQPK 311
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 36/47 (76%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D ++L E+ S++GE+ + T+K+DP TGRSRGF F++FKD S++K
Sbjct: 158 DTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDK 204
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 57/106 (53%), Gaps = 2/106 (1%)
Query: 157 ASVEDVIAEGN--HVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIET 214
A++ED+ N KI A K + GK+F+GGLS + +++ + ++FG +++
Sbjct: 118 AAMEDMNEYSNIEEFAEGSKINASKNQQDDGKMFIGGLSWDTSKKDLTEYLSRFGEVVDC 177
Query: 215 EMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKA 260
+ D + + F F+ F+ + V +L+ + K++ K +D K+A
Sbjct: 178 TIKTDPVTGRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRA 223
Score = 47.8 bits (112), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D E++KE+F +GEIEN+ L D T RGF FI + D E ++K
Sbjct: 243 DTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPVKK 289
Score = 42.4 bits (98), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 31/54 (57%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 497
EI E+P D ++R+ FCFIT+ E V LL++ +I + ++K A PK
Sbjct: 258 EIENIELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIKVAQPK 311
>gi|386781544|ref|NP_001247638.1| heterogeneous nuclear ribonucleoprotein D-like [Macaca mulatta]
gi|380787105|gb|AFE65428.1| heterogeneous nuclear ribonucleoprotein D-like isoform a [Macaca
mulatta]
gi|380787107|gb|AFE65429.1| heterogeneous nuclear ribonucleoprotein D-like isoform a [Macaca
mulatta]
gi|383410015|gb|AFH28221.1| heterogeneous nuclear ribonucleoprotein D-like isoform a [Macaca
mulatta]
Length = 420
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 65/155 (41%), Positives = 98/155 (63%), Gaps = 10/155 (6%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++L E+ S++GE+ + T+K+DP TGRSRGF F++FKD ASV+ V+ H ++ K
Sbjct: 162 KDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDA-----ASVDKVLELKEHKLDGK 216
Query: 174 KIEAKKAKAKSGK-----IFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNF 228
I+ K+AKA GK +FVGGLSP+ +E+IK +F FG I E+P D ++R+ F
Sbjct: 217 LIDPKRAKALKGKEPPKKVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGF 276
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
CFIT+ E V LL++ +I + ++K A PK
Sbjct: 277 CFITYTDEEPVKKLLESRYHQIGSGKCEIKVAQPK 311
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 36/47 (76%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D ++L E+ S++GE+ + T+K+DP TGRSRGF F++FKD S++K
Sbjct: 158 DTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDK 204
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 57/106 (53%), Gaps = 2/106 (1%)
Query: 157 ASVEDVIAEGN--HVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIET 214
A++ED+ N KI A K + GK+F+GGLS + +++ + ++FG +++
Sbjct: 118 ATMEDMNEYSNIEEFAEGSKINASKNQQDDGKMFIGGLSWDTSKKDLTEYLSRFGEVVDC 177
Query: 215 EMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKA 260
+ D + + F F+ F+ + V +L+ + K++ K +D K+A
Sbjct: 178 TIKTDPVTGRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRA 223
Score = 47.8 bits (112), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D E++KE+F +GEIEN+ L D T RGF FI + D E ++K
Sbjct: 243 DTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPVKK 289
Score = 42.4 bits (98), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 31/54 (57%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 497
EI E+P D ++R+ FCFIT+ E V LL++ +I + ++K A PK
Sbjct: 258 EIENIELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIKVAQPK 311
>gi|410957341|ref|XP_003985287.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 1
[Felis catus]
gi|410957343|ref|XP_003985288.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 2
[Felis catus]
Length = 420
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 65/155 (41%), Positives = 98/155 (63%), Gaps = 10/155 (6%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++L E+ S++GE+ + T+K+DP TGRSRGF F++FKD ASV+ V+ H ++ K
Sbjct: 162 KDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDA-----ASVDKVLELKEHKLDGK 216
Query: 174 KIEAKKAKAKSGK-----IFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNF 228
I+ K+AKA GK +FVGGLSP+ +E+IK +F FG I E+P D ++R+ F
Sbjct: 217 LIDPKRAKALKGKEPPKKVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGF 276
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
CFIT+ E V LL++ +I + ++K A PK
Sbjct: 277 CFITYTDEEPVKKLLESRYHQIGSGKCEIKVAQPK 311
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 36/47 (76%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D ++L E+ S++GE+ + T+K+DP TGRSRGF F++FKD S++K
Sbjct: 158 DTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDK 204
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 57/106 (53%), Gaps = 2/106 (1%)
Query: 157 ASVEDVIAEGN--HVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIET 214
A++ED+ N KI A K + GK+F+GGLS + +++ + ++FG +++
Sbjct: 118 ATMEDMNEYSNIEEFAEGSKINASKNQQDDGKMFIGGLSWDTSKKDLTEYLSRFGEVVDC 177
Query: 215 EMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKA 260
+ D + + F F+ F+ + V +L+ + K++ K +D K+A
Sbjct: 178 TIKTDPVTGRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRA 223
Score = 47.8 bits (112), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D E++KE+F +GEIEN+ L D T RGF FI + D E ++K
Sbjct: 243 DTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPVKK 289
Score = 42.4 bits (98), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 31/54 (57%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 497
EI E+P D ++R+ FCFIT+ E V LL++ +I + ++K A PK
Sbjct: 258 EIENIELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIKVAQPK 311
>gi|344284837|ref|XP_003414171.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D isoform 1
[Loxodonta africana]
Length = 420
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 65/155 (41%), Positives = 98/155 (63%), Gaps = 10/155 (6%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++L E+ S++GE+ + T+K+DP TGRSRGF F++FKD ASV+ V+ H ++ K
Sbjct: 162 KDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDA-----ASVDKVLELKEHKLDGK 216
Query: 174 KIEAKKAKAKSGK-----IFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNF 228
I+ K+AKA GK +FVGGLSP+ +E+IK +F FG I E+P D ++R+ F
Sbjct: 217 LIDPKRAKALKGKEPPKKVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGF 276
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
CFIT+ E V LL++ +I + ++K A PK
Sbjct: 277 CFITYTDEEPVKKLLESRYHQIGSGKCEIKVAQPK 311
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 36/47 (76%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D ++L E+ S++GE+ + T+K+DP TGRSRGF F++FKD S++K
Sbjct: 158 DTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDK 204
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 57/106 (53%), Gaps = 2/106 (1%)
Query: 157 ASVEDVIAEGN--HVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIET 214
A++ED+ N KI A K + GK+F+GGLS + +++ + ++FG +++
Sbjct: 118 ATMEDMNEYSNIEEFAEGSKINASKNQQDDGKMFIGGLSWDTSKKDLTEYLSRFGEVVDC 177
Query: 215 EMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKA 260
+ D + + F F+ F+ + V +L+ + K++ K +D K+A
Sbjct: 178 TIKTDPVTGRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRA 223
Score = 47.4 bits (111), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D E++KE+F +GEIEN+ L D T RGF FI + D E ++K
Sbjct: 243 DTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPVKK 289
Score = 42.4 bits (98), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 31/54 (57%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 497
EI E+P D ++R+ FCFIT+ E V LL++ +I + ++K A PK
Sbjct: 258 EIENIELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIKVAQPK 311
>gi|297673870|ref|XP_002814970.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 1
[Pongo abelii]
gi|332233343|ref|XP_003265861.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 1
[Nomascus leucogenys]
gi|395735091|ref|XP_003776522.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 2
[Pongo abelii]
Length = 420
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 65/155 (41%), Positives = 98/155 (63%), Gaps = 10/155 (6%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++L E+ S++GE+ + T+K+DP TGRSRGF F++FKD ASV+ V+ H ++ K
Sbjct: 162 KDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDA-----ASVDKVLELKEHKLDGK 216
Query: 174 KIEAKKAKAKSGK-----IFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNF 228
I+ K+AKA GK +FVGGLSP+ +E+IK +F FG I E+P D ++R+ F
Sbjct: 217 LIDPKRAKALKGKEPPKKVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGF 276
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
CFIT+ E V LL++ +I + ++K A PK
Sbjct: 277 CFITYTDEEPVKKLLESRYHQIGSGKCEIKVAQPK 311
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 36/47 (76%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D ++L E+ S++GE+ + T+K+DP TGRSRGF F++FKD S++K
Sbjct: 158 DTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDK 204
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 57/106 (53%), Gaps = 2/106 (1%)
Query: 157 ASVEDVIAEGN--HVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIET 214
A++ED+ N KI A K + GK+F+GGLS + +++ + ++FG +++
Sbjct: 118 ATMEDMNEYSNIEEFAEGSKINASKNQQDDGKMFIGGLSWDTSKKDLTEYLSRFGEVVDC 177
Query: 215 EMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKA 260
+ D + + F F+ F+ + V +L+ + K++ K +D K+A
Sbjct: 178 TIKTDPVTGRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRA 223
Score = 47.4 bits (111), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D E++KE+F +GEIEN+ L D T RGF FI + D E ++K
Sbjct: 243 DTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPVKK 289
Score = 42.4 bits (98), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 31/54 (57%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 497
EI E+P D ++R+ FCFIT+ E V LL++ +I + ++K A PK
Sbjct: 258 EIENIELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIKVAQPK 311
>gi|426344793|ref|XP_004038938.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 1
[Gorilla gorilla gorilla]
gi|426344795|ref|XP_004038939.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 2
[Gorilla gorilla gorilla]
Length = 420
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 65/155 (41%), Positives = 98/155 (63%), Gaps = 10/155 (6%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++L E+ S++GE+ + T+K+DP TGRSRGF F++FKD ASV+ V+ H ++ K
Sbjct: 162 KDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDA-----ASVDKVLELKEHKLDGK 216
Query: 174 KIEAKKAKAKSGK-----IFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNF 228
I+ K+AKA GK +FVGGLSP+ +E+IK +F FG I E+P D ++R+ F
Sbjct: 217 LIDPKRAKALKGKEPPKKVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGF 276
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
CFIT+ E V LL++ +I + ++K A PK
Sbjct: 277 CFITYTDEEPVKKLLESRYHQIGSGKCEIKVAQPK 311
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 36/47 (76%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D ++L E+ S++GE+ + T+K+DP TGRSRGF F++FKD S++K
Sbjct: 158 DTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDK 204
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 57/106 (53%), Gaps = 2/106 (1%)
Query: 157 ASVEDVIAEGN--HVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIET 214
A++ED+ N KI A K + GK+F+GGLS + +++ + ++FG +++
Sbjct: 118 ATMEDMNEYSNIEEFAEGSKINASKNQQDDGKMFIGGLSWDTSKKDLTEYLSRFGEVVDC 177
Query: 215 EMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKA 260
+ D + + F F+ F+ + V +L+ + K++ K +D K+A
Sbjct: 178 TIKTDPVTGRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRA 223
Score = 47.4 bits (111), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D E++KE+F +GEIEN+ L D T RGF FI + D E ++K
Sbjct: 243 DTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPVKK 289
Score = 42.4 bits (98), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 31/54 (57%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 497
EI E+P D ++R+ FCFIT+ E V LL++ +I + ++K A PK
Sbjct: 258 EIENIELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIKVAQPK 311
>gi|194390304|dbj|BAG61914.1| unnamed protein product [Homo sapiens]
Length = 271
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 65/155 (41%), Positives = 99/155 (63%), Gaps = 10/155 (6%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++L E+ S++GE+ + T+K+DP TGRSRGF F++FKD ASV+ V+ H +++K
Sbjct: 13 KDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDA-----ASVDKVLELKEHKLDSK 67
Query: 174 KIEAKKAKAKSGK-----IFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNF 228
I+ K+AKA GK +FVGGLSP+ +E+IK +F FG I E+P D ++R+ F
Sbjct: 68 LIDPKRAKALKGKEPPKKVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGF 127
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
CFIT+ E V LL++ +I + ++K A PK
Sbjct: 128 CFITYTDEEPVKKLLESRYHQIGSGKCEIKVAQPK 162
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 36/48 (75%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
D ++L E+ S++GE+ + T+K+DP TGRSRGF F++FKD S++K
Sbjct: 9 DTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKV 56
Score = 47.0 bits (110), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D E++KE+F +GEIEN+ L D T RGF FI + D E ++K
Sbjct: 94 DTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPVKK 140
Score = 42.4 bits (98), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 31/54 (57%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 497
EI E+P D ++R+ FCFIT+ E V LL++ +I + ++K A PK
Sbjct: 109 EIENIELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIKVAQPK 162
Score = 42.4 bits (98), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 18/74 (24%), Positives = 43/74 (58%)
Query: 187 IFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNP 246
+F+GGLS + +++ + ++FG +++ + D + + F F+ F+ + V +L+
Sbjct: 1 MFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLELK 60
Query: 247 KQKINDKEVDVKKA 260
+ K++ K +D K+A
Sbjct: 61 EHKLDSKLIDPKRA 74
>gi|90076284|dbj|BAE87822.1| unnamed protein product [Macaca fascicularis]
Length = 231
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 70/173 (40%), Positives = 105/173 (60%), Gaps = 14/173 (8%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++L E+ S++GE+ + T+K+DP TGRSRGF F++FKD ASV+ V+ H ++ K
Sbjct: 43 KDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDA-----ASVDKVLELKEHKLDGK 97
Query: 174 KIEAKKAKAKSGK-----IFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNF 228
I+ K+AKA GK +FVGGLSP+ +E+IK +F FG I E+P D ++R+ F
Sbjct: 98 LIDPKRAKALKGKGPPKKVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGF 157
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKP----EPFGVRGGRGGRG 277
CFIT+ E V LL++ +I + ++K A PK + +GGRG G
Sbjct: 158 CFITYTDEEPVKKLLESRYHQIGSGKCEIKVAQPKEVYRQQQQQQKGGRGACG 210
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 36/48 (75%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
D ++L E+ S++GE+ + T+K+DP TGRSRGF F++FKD S++K
Sbjct: 39 DTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKV 86
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 50/87 (57%)
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
KI A K + GK+F+GGLS + +++ + ++FG +++ + D + + F F+ F
Sbjct: 18 KINASKNQQDDGKMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLF 77
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKA 260
+ + V +L+ + K++ K +D K+A
Sbjct: 78 KDAASVDKVLELKEHKLDGKLIDPKRA 104
Score = 47.0 bits (110), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D E++KE+F +GEIEN+ L D T RGF FI + D E ++K
Sbjct: 124 DTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPVKK 170
Score = 42.4 bits (98), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 4/72 (5%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKP----E 499
EI E+P D ++R+ FCFIT+ E V LL++ +I + ++K A PK +
Sbjct: 139 EIENIELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIKVAQPKEVYRQQ 198
Query: 500 PFGVRGGRGGRG 511
+GGRG G
Sbjct: 199 QQQQKGGRGACG 210
>gi|14110407|ref|NP_112740.1| heterogeneous nuclear ribonucleoprotein D-like isoform a [Homo
sapiens]
gi|114593989|ref|XP_001142372.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 4
[Pan troglodytes]
gi|332819433|ref|XP_003310370.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like [Pan
troglodytes]
gi|397524661|ref|XP_003832307.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 1
[Pan paniscus]
gi|397524663|ref|XP_003832308.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 2
[Pan paniscus]
gi|74762096|sp|O14979.3|HNRDL_HUMAN RecName: Full=Heterogeneous nuclear ribonucleoprotein D-like;
Short=hnRNP D-like; Short=hnRNP DL; AltName:
Full=AU-rich element RNA-binding factor; AltName:
Full=JKT41-binding protein; AltName: Full=Protein laAUF1
gi|4512254|dbj|BAA75239.1| JKTBP2 [Homo sapiens]
gi|4512257|dbj|BAA75241.1| JKTBP2 [Homo sapiens]
gi|15079822|gb|AAH11714.1| Heterogeneous nuclear ribonucleoprotein D-like [Homo sapiens]
gi|47115183|emb|CAG28551.1| HNRPDL [Homo sapiens]
gi|47938369|gb|AAH71944.1| Heterogeneous nuclear ribonucleoprotein D-like [Homo sapiens]
gi|63990763|gb|AAY40914.1| unknown [Homo sapiens]
gi|119626290|gb|EAX05885.1| heterogeneous nuclear ribonucleoprotein D-like, isoform CRA_a [Homo
sapiens]
gi|119626291|gb|EAX05886.1| heterogeneous nuclear ribonucleoprotein D-like, isoform CRA_a [Homo
sapiens]
gi|119626292|gb|EAX05887.1| heterogeneous nuclear ribonucleoprotein D-like, isoform CRA_a [Homo
sapiens]
gi|119626293|gb|EAX05888.1| heterogeneous nuclear ribonucleoprotein D-like, isoform CRA_a [Homo
sapiens]
gi|119626294|gb|EAX05889.1| heterogeneous nuclear ribonucleoprotein D-like, isoform CRA_a [Homo
sapiens]
gi|119626296|gb|EAX05891.1| heterogeneous nuclear ribonucleoprotein D-like, isoform CRA_a [Homo
sapiens]
gi|123987254|gb|ABM83797.1| heterogeneous nuclear ribonucleoprotein D-like [synthetic
construct]
gi|123999068|gb|ABM87118.1| heterogeneous nuclear ribonucleoprotein D-like [synthetic
construct]
gi|410248290|gb|JAA12112.1| heterogeneous nuclear ribonucleoprotein D-like [Pan troglodytes]
gi|410296200|gb|JAA26700.1| heterogeneous nuclear ribonucleoprotein D-like [Pan troglodytes]
gi|410339827|gb|JAA38860.1| heterogeneous nuclear ribonucleoprotein D-like [Pan troglodytes]
gi|410339829|gb|JAA38861.1| heterogeneous nuclear ribonucleoprotein D-like [Pan troglodytes]
gi|410339831|gb|JAA38862.1| heterogeneous nuclear ribonucleoprotein D-like [Pan troglodytes]
Length = 420
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 65/155 (41%), Positives = 98/155 (63%), Gaps = 10/155 (6%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++L E+ S++GE+ + T+K+DP TGRSRGF F++FKD ASV+ V+ H ++ K
Sbjct: 162 KDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDA-----ASVDKVLELKEHKLDGK 216
Query: 174 KIEAKKAKAKSGK-----IFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNF 228
I+ K+AKA GK +FVGGLSP+ +E+IK +F FG I E+P D ++R+ F
Sbjct: 217 LIDPKRAKALKGKEPPKKVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGF 276
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
CFIT+ E V LL++ +I + ++K A PK
Sbjct: 277 CFITYTDEEPVKKLLESRYHQIGSGKCEIKVAQPK 311
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 36/47 (76%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D ++L E+ S++GE+ + T+K+DP TGRSRGF F++FKD S++K
Sbjct: 158 DTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDK 204
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 50/87 (57%)
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
KI A K + GK+F+GGLS + +++ + ++FG +++ + D + + F F+ F
Sbjct: 137 KINASKNQQDDGKMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLF 196
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKA 260
+ + V +L+ + K++ K +D K+A
Sbjct: 197 KDAASVDKVLELKEHKLDGKLIDPKRA 223
Score = 47.8 bits (112), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D E++KE+F +GEIEN+ L D T RGF FI + D E ++K
Sbjct: 243 DTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPVKK 289
Score = 42.4 bits (98), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 31/54 (57%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 497
EI E+P D ++R+ FCFIT+ E V LL++ +I + ++K A PK
Sbjct: 258 EIENIELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIKVAQPK 311
>gi|74001737|ref|XP_858404.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform
12 [Canis lupus familiaris]
Length = 420
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 65/155 (41%), Positives = 98/155 (63%), Gaps = 10/155 (6%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++L E+ S++GE+ + T+K+DP TGRSRGF F++FKD ASV+ V+ H ++ K
Sbjct: 162 KDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDA-----ASVDKVLELKEHKLDGK 216
Query: 174 KIEAKKAKAKSGK-----IFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNF 228
I+ K+AKA GK +FVGGLSP+ +E+IK +F FG I E+P D ++R+ F
Sbjct: 217 LIDPKRAKALKGKEPPKKVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGF 276
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
CFIT+ E V LL++ +I + ++K A PK
Sbjct: 277 CFITYTDEEPVKKLLESRYHQIGSGKCEIKVAQPK 311
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 36/47 (76%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D ++L E+ S++GE+ + T+K+DP TGRSRGF F++FKD S++K
Sbjct: 158 DTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDK 204
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 57/106 (53%), Gaps = 2/106 (1%)
Query: 157 ASVEDVIAEGN--HVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIET 214
A++ED+ N KI A K + GK+F+GGLS + +++ + ++FG +++
Sbjct: 118 AAMEDMNEYSNIEEFAEGSKINASKNQQDDGKMFIGGLSWDTSKKDLTEYLSRFGEVVDC 177
Query: 215 EMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKA 260
+ D + + F F+ F+ + V +L+ + K++ K +D K+A
Sbjct: 178 TIKTDPVTGRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRA 223
Score = 47.8 bits (112), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D E++KE+F +GEIEN+ L D T RGF FI + D E ++K
Sbjct: 243 DTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPVKK 289
Score = 42.4 bits (98), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 31/54 (57%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 497
EI E+P D ++R+ FCFIT+ E V LL++ +I + ++K A PK
Sbjct: 258 EIENIELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIKVAQPK 311
>gi|417410446|gb|JAA51696.1| Putative rna-binding protein musashi/mrna cleavage and
polyadenylation factor i complex subunit hrp1, partial
[Desmodus rotundus]
Length = 404
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 65/155 (41%), Positives = 98/155 (63%), Gaps = 10/155 (6%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++L E+ S++GE+ + T+K+DP TGRSRGF F++FKD ASV+ V+ H ++ K
Sbjct: 146 KDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDA-----ASVDKVLELKEHKLDGK 200
Query: 174 KIEAKKAKAKSGK-----IFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNF 228
I+ K+AKA GK +FVGGLSP+ +E+IK +F FG I E+P D ++R+ F
Sbjct: 201 LIDPKRAKALKGKEPPKKVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGF 260
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
CFIT+ E V LL++ +I + ++K A PK
Sbjct: 261 CFITYTDEEPVKKLLESRYHQIGSGKCEIKVAQPK 295
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 36/47 (76%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D ++L E+ S++GE+ + T+K+DP TGRSRGF F++FKD S++K
Sbjct: 142 DTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDK 188
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 57/106 (53%), Gaps = 2/106 (1%)
Query: 157 ASVEDVIAEGN--HVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIET 214
A++EDV N KI A K + GK+F+GGLS + +++ + ++FG +++
Sbjct: 102 ATMEDVNEYSNIEEFAEGSKINASKNQQDDGKMFIGGLSWDTSKKDLTEYLSRFGEVVDC 161
Query: 215 EMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKA 260
+ D + + F F+ F+ + V +L+ + K++ K +D K+A
Sbjct: 162 TIKTDPVTGRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRA 207
Score = 47.4 bits (111), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D E++KE+F +GEIEN+ L D T RGF FI + D E ++K
Sbjct: 227 DTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPVKK 273
Score = 42.4 bits (98), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 31/54 (57%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 497
EI E+P D ++R+ FCFIT+ E V LL++ +I + ++K A PK
Sbjct: 242 EIENIELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIKVAQPK 295
>gi|426219507|ref|XP_004003963.1| PREDICTED: uncharacterized protein LOC101101951 [Ovis aries]
Length = 503
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 64/155 (41%), Positives = 98/155 (63%), Gaps = 10/155 (6%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++L E+ S++GE+ + T+K+DP TGRSRGF F++FKD ASV+ V+ H ++ K
Sbjct: 305 KDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDA-----ASVDKVLELKEHKLDGK 359
Query: 174 KIEAKKAKAKSGK-----IFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNF 228
I+ K+AKA +GK +FVG LSP+ +E+IK +F FG I E+P D ++R+ F
Sbjct: 360 LIDPKRAKALNGKEPPKKVFVGVLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGF 419
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
CFIT+ E V LL++ +I + ++K A PK
Sbjct: 420 CFITYTDEEPVKKLLESRYHQIGSGKCEIKVAQPK 454
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 36/47 (76%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D ++L E+ S++GE+ + T+K+DP TGRSRGF F++FKD S++K
Sbjct: 301 DTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDK 347
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D E++KE+F +GEIEN+ L D T RGF FI + D E ++K
Sbjct: 386 DTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPVKK 432
Score = 45.4 bits (106), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 45/77 (58%)
Query: 184 SGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLL 243
S K+F+GGLS + +++ + ++FG +++ + D + + F F+ F+ + V +L
Sbjct: 290 SSKMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVL 349
Query: 244 KNPKQKINDKEVDVKKA 260
+ + K++ K +D K+A
Sbjct: 350 ELKEHKLDGKLIDPKRA 366
Score = 43.1 bits (100), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 31/54 (57%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 497
EI E+P D ++R+ FCFIT+ E V LL++ +I + ++K A PK
Sbjct: 401 EIENIELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIKVAQPK 454
>gi|296486392|tpg|DAA28505.1| TPA: heterogeneous nuclear ribonucleoprotein D-like [Bos taurus]
Length = 420
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 65/155 (41%), Positives = 98/155 (63%), Gaps = 10/155 (6%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++L E+ S++GE+ + T+K+DP TGRSRGF F++FKD ASV+ V+ H ++ K
Sbjct: 162 KDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDA-----ASVDKVLELKEHKLDGK 216
Query: 174 KIEAKKAKAKSGK-----IFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNF 228
I+ K+AKA GK +FVGGLSP+ +E+IK +F FG I E+P D ++R+ F
Sbjct: 217 LIDPKRAKALKGKEPPKKVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGF 276
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
CFIT+ E V LL++ +I + ++K A PK
Sbjct: 277 CFITYTDEEPVKKLLESRYHQIGSGKCEIKVAQPK 311
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 36/47 (76%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D ++L E+ S++GE+ + T+K+DP TGRSRGF F++FKD S++K
Sbjct: 158 DTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDK 204
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 57/106 (53%), Gaps = 2/106 (1%)
Query: 157 ASVEDVIAEGN--HVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIET 214
A++ED+ N KI A K + GK+F+GGLS + +++ + ++FG +++
Sbjct: 118 AAMEDMNEYSNIEEFAEGSKINASKNQQDDGKMFIGGLSWDTSKKDLTEYLSRFGEVVDC 177
Query: 215 EMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKA 260
+ D + + F F+ F+ + V +L+ + K++ K +D K+A
Sbjct: 178 TIKTDPVTGRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRA 223
Score = 47.8 bits (112), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D E++KE+F +GEIEN+ L D T RGF FI + D E ++K
Sbjct: 243 DTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPVKK 289
Score = 42.4 bits (98), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 31/54 (57%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 497
EI E+P D ++R+ FCFIT+ E V LL++ +I + ++K A PK
Sbjct: 258 EIENIELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIKVAQPK 311
>gi|426344797|ref|XP_004038940.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 3
[Gorilla gorilla gorilla]
Length = 363
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/155 (41%), Positives = 98/155 (63%), Gaps = 10/155 (6%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++L E+ S++GE+ + T+K+DP TGRSRGF F++FKD ASV+ V+ H ++ K
Sbjct: 162 KDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDA-----ASVDKVLELKEHKLDGK 216
Query: 174 KIEAKKAKAKSGK-----IFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNF 228
I+ K+AKA GK +FVGGLSP+ +E+IK +F FG I E+P D ++R+ F
Sbjct: 217 LIDPKRAKALKGKEPPKKVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGF 276
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
CFIT+ E V LL++ +I + ++K A PK
Sbjct: 277 CFITYTDEEPVKKLLESRYHQIGSGKCEIKVAQPK 311
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 36/47 (76%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D ++L E+ S++GE+ + T+K+DP TGRSRGF F++FKD S++K
Sbjct: 158 DTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDK 204
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 57/106 (53%), Gaps = 2/106 (1%)
Query: 157 ASVEDVIAEGN--HVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIET 214
A++ED+ N KI A K + GK+F+GGLS + +++ + ++FG +++
Sbjct: 118 ATMEDMNEYSNIEEFAEGSKINASKNQQDDGKMFIGGLSWDTSKKDLTEYLSRFGEVVDC 177
Query: 215 EMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKA 260
+ D + + F F+ F+ + V +L+ + K++ K +D K+A
Sbjct: 178 TIKTDPVTGRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRA 223
Score = 47.4 bits (111), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D E++KE+F +GEIEN+ L D T RGF FI + D E ++K
Sbjct: 243 DTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPVKK 289
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 31/54 (57%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 497
EI E+P D ++R+ FCFIT+ E V LL++ +I + ++K A PK
Sbjct: 258 EIENIELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIKVAQPK 311
>gi|144226849|ref|NP_001077194.1| heterogeneous nuclear ribonucleoprotein D-like [Bos taurus]
gi|134024605|gb|AAI34449.1| HNRPDL protein [Bos taurus]
Length = 420
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/155 (41%), Positives = 98/155 (63%), Gaps = 10/155 (6%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++L E+ S++GE+ + T+K+DP TGRSRGF F++FKD ASV+ V+ H ++ K
Sbjct: 162 KDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDA-----ASVDKVLELKEHKLDGK 216
Query: 174 KIEAKKAKAKSGK-----IFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNF 228
I+ K+AKA GK +FVGGLSP+ +E+IK +F FG I E+P D ++R+ F
Sbjct: 217 LIDPKRAKALKGKEPPKKVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGF 276
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
CFIT+ E V LL++ +I + ++K A PK
Sbjct: 277 CFITYTDEEPVKKLLESRYHQIGSGKCEIKVAQPK 311
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 36/47 (76%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D ++L E+ S++GE+ + T+K+DP TGRSRGF F++FKD S++K
Sbjct: 158 DTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDK 204
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 57/106 (53%), Gaps = 2/106 (1%)
Query: 157 ASVEDVIAEGN--HVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIET 214
A++ED+ N KI A K + GK+F+GGLS + +++ + ++FG +++
Sbjct: 118 AAMEDMNEYSNIEEFAEGSKINASKNQQDDGKMFIGGLSWDTSKKDLTEYLSRFGEVVDC 177
Query: 215 EMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKA 260
+ D + + F F+ F+ + V +L+ + K++ K +D K+A
Sbjct: 178 TIKTDPVTGRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRA 223
Score = 47.8 bits (112), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D E++KE+F +GEIEN+ L D T RGF FI + D E ++K
Sbjct: 243 DTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPVKK 289
Score = 42.4 bits (98), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 31/54 (57%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 497
EI E+P D ++R+ FCFIT+ E V LL++ +I + ++K A PK
Sbjct: 258 EIENIELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIKVAQPK 311
>gi|395735093|ref|XP_003776523.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 3
[Pongo abelii]
gi|441625206|ref|XP_004089054.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like [Nomascus
leucogenys]
Length = 363
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/155 (41%), Positives = 98/155 (63%), Gaps = 10/155 (6%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++L E+ S++GE+ + T+K+DP TGRSRGF F++FKD ASV+ V+ H ++ K
Sbjct: 162 KDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDA-----ASVDKVLELKEHKLDGK 216
Query: 174 KIEAKKAKAKSGK-----IFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNF 228
I+ K+AKA GK +FVGGLSP+ +E+IK +F FG I E+P D ++R+ F
Sbjct: 217 LIDPKRAKALKGKEPPKKVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGF 276
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
CFIT+ E V LL++ +I + ++K A PK
Sbjct: 277 CFITYTDEEPVKKLLESRYHQIGSGKCEIKVAQPK 311
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 36/47 (76%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D ++L E+ S++GE+ + T+K+DP TGRSRGF F++FKD S++K
Sbjct: 158 DTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDK 204
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 57/106 (53%), Gaps = 2/106 (1%)
Query: 157 ASVEDVIAEGN--HVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIET 214
A++ED+ N KI A K + GK+F+GGLS + +++ + ++FG +++
Sbjct: 118 ATMEDMNEYSNIEEFAEGSKINASKNQQDDGKMFIGGLSWDTSKKDLTEYLSRFGEVVDC 177
Query: 215 EMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKA 260
+ D + + F F+ F+ + V +L+ + K++ K +D K+A
Sbjct: 178 TIKTDPVTGRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRA 223
Score = 47.4 bits (111), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D E++KE+F +GEIEN+ L D T RGF FI + D E ++K
Sbjct: 243 DTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPVKK 289
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 31/54 (57%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 497
EI E+P D ++R+ FCFIT+ E V LL++ +I + ++K A PK
Sbjct: 258 EIENIELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIKVAQPK 311
>gi|354497787|ref|XP_003511000.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like
[Cricetulus griseus]
gi|344249844|gb|EGW05948.1| Heterogeneous nuclear ribonucleoprotein D-like [Cricetulus griseus]
Length = 271
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/155 (41%), Positives = 98/155 (63%), Gaps = 10/155 (6%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++L E+ S++GE+ + T+K+DP TGRSRGF F++FKD ASV+ V+ H ++ K
Sbjct: 13 KDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDA-----ASVDKVLELKEHKLDGK 67
Query: 174 KIEAKKAKAKSGK-----IFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNF 228
I+ K+AKA GK +FVGGLSP+ +E+IK +F FG I E+P D ++R+ F
Sbjct: 68 LIDPKRAKALKGKEPPKKVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGF 127
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
CFIT+ E V LL++ +I + ++K A PK
Sbjct: 128 CFITYTDEEPVKKLLESRYHQIGSGKCEIKVAQPK 162
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 36/48 (75%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
D ++L E+ S++GE+ + T+K+DP TGRSRGF F++FKD S++K
Sbjct: 9 DTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKV 56
Score = 47.0 bits (110), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D E++KE+F +GEIEN+ L D T RGF FI + D E ++K
Sbjct: 94 DTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPVKK 140
Score = 42.4 bits (98), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 31/54 (57%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 497
EI E+P D ++R+ FCFIT+ E V LL++ +I + ++K A PK
Sbjct: 109 EIENIELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIKVAQPK 162
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/74 (24%), Positives = 43/74 (58%)
Query: 187 IFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNP 246
+F+GGLS + +++ + ++FG +++ + D + + F F+ F+ + V +L+
Sbjct: 1 MFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLELK 60
Query: 247 KQKINDKEVDVKKA 260
+ K++ K +D K+A
Sbjct: 61 EHKLDGKLIDPKRA 74
>gi|148235301|ref|NP_001084608.1| heterogeneous nuclear ribonucleoprotein D-like-B [Xenopus laevis]
gi|82237179|sp|Q6NU14.1|HNDLB_XENLA RecName: Full=Heterogeneous nuclear ribonucleoprotein D-like-B;
Short=hnRNP D-like B; Short=hnRNP DL-B
gi|46249880|gb|AAH68788.1| MGC81335 protein [Xenopus laevis]
Length = 291
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 64/155 (41%), Positives = 97/155 (62%), Gaps = 10/155 (6%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++L E+ S++GE+ + T+K+DP TGRSRGF F++FKD SV+ V+ H ++ K
Sbjct: 48 KDLTEYLSRFGEVLDCTIKTDPVTGRSRGFGFVLFKDA-----VSVDKVLETKEHKLDGK 102
Query: 174 KIEAKKAKAKSGK-----IFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNF 228
I+ K+AKA GK +FVGGLSPE +E+IK +F FG I E+P D ++R+ F
Sbjct: 103 LIDPKRAKALQGKEPPKKVFVGGLSPETTEEQIKQYFGGFGEIENIELPMDTKTNERRGF 162
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
CF+T+ E V LL++ +I + ++K A PK
Sbjct: 163 CFVTYTDEEPVQKLLESRFHQIGTGKCEIKAAQPK 197
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 36/48 (75%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
D ++L E+ S++GE+ + T+K+DP TGRSRGF F++FKD S++K
Sbjct: 44 DTSKKDLTEYLSRFGEVLDCTIKTDPVTGRSRGFGFVLFKDAVSVDKV 91
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 28/43 (65%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
E++K++F +GEIEN+ L D T RGF F+ + D E ++K
Sbjct: 133 EQIKQYFGGFGEIENIELPMDTKTNERRGFCFVTYTDEEPVQK 175
Score = 43.5 bits (101), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 43/75 (57%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+F+GGLS + +++ + ++FG +++ + D + + F F+ F+ V +L+
Sbjct: 35 KMFIGGLSWDTSKKDLTEYLSRFGEVLDCTIKTDPVTGRSRGFGFVLFKDAVSVDKVLET 94
Query: 246 PKQKINDKEVDVKKA 260
+ K++ K +D K+A
Sbjct: 95 KEHKLDGKLIDPKRA 109
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 31/54 (57%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 497
EI E+P D ++R+ FCF+T+ E V LL++ +I + ++K A PK
Sbjct: 144 EIENIELPMDTKTNERRGFCFVTYTDEEPVQKLLESRFHQIGTGKCEIKAAQPK 197
>gi|410957345|ref|XP_003985289.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 3
[Felis catus]
Length = 363
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/155 (41%), Positives = 98/155 (63%), Gaps = 10/155 (6%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++L E+ S++GE+ + T+K+DP TGRSRGF F++FKD ASV+ V+ H ++ K
Sbjct: 162 KDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDA-----ASVDKVLELKEHKLDGK 216
Query: 174 KIEAKKAKAKSGK-----IFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNF 228
I+ K+AKA GK +FVGGLSP+ +E+IK +F FG I E+P D ++R+ F
Sbjct: 217 LIDPKRAKALKGKEPPKKVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGF 276
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
CFIT+ E V LL++ +I + ++K A PK
Sbjct: 277 CFITYTDEEPVKKLLESRYHQIGSGKCEIKVAQPK 311
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 36/47 (76%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D ++L E+ S++GE+ + T+K+DP TGRSRGF F++FKD S++K
Sbjct: 158 DTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDK 204
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 57/106 (53%), Gaps = 2/106 (1%)
Query: 157 ASVEDVIAEGN--HVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIET 214
A++ED+ N KI A K + GK+F+GGLS + +++ + ++FG +++
Sbjct: 118 ATMEDMNEYSNIEEFAEGSKINASKNQQDDGKMFIGGLSWDTSKKDLTEYLSRFGEVVDC 177
Query: 215 EMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKA 260
+ D + + F F+ F+ + V +L+ + K++ K +D K+A
Sbjct: 178 TIKTDPVTGRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRA 223
Score = 47.4 bits (111), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D E++KE+F +GEIEN+ L D T RGF FI + D E ++K
Sbjct: 243 DTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPVKK 289
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 31/54 (57%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 497
EI E+P D ++R+ FCFIT+ E V LL++ +I + ++K A PK
Sbjct: 258 EIENIELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIKVAQPK 311
>gi|74001731|ref|XP_858286.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 9
[Canis lupus familiaris]
Length = 363
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/155 (41%), Positives = 98/155 (63%), Gaps = 10/155 (6%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++L E+ S++GE+ + T+K+DP TGRSRGF F++FKD ASV+ V+ H ++ K
Sbjct: 162 KDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDA-----ASVDKVLELKEHKLDGK 216
Query: 174 KIEAKKAKAKSGK-----IFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNF 228
I+ K+AKA GK +FVGGLSP+ +E+IK +F FG I E+P D ++R+ F
Sbjct: 217 LIDPKRAKALKGKEPPKKVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGF 276
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
CFIT+ E V LL++ +I + ++K A PK
Sbjct: 277 CFITYTDEEPVKKLLESRYHQIGSGKCEIKVAQPK 311
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 36/47 (76%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D ++L E+ S++GE+ + T+K+DP TGRSRGF F++FKD S++K
Sbjct: 158 DTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDK 204
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 57/106 (53%), Gaps = 2/106 (1%)
Query: 157 ASVEDVIAEGN--HVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIET 214
A++ED+ N KI A K + GK+F+GGLS + +++ + ++FG +++
Sbjct: 118 AAMEDMNEYSNIEEFAEGSKINASKNQQDDGKMFIGGLSWDTSKKDLTEYLSRFGEVVDC 177
Query: 215 EMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKA 260
+ D + + F F+ F+ + V +L+ + K++ K +D K+A
Sbjct: 178 TIKTDPVTGRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRA 223
Score = 47.4 bits (111), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D E++KE+F +GEIEN+ L D T RGF FI + D E ++K
Sbjct: 243 DTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPVKK 289
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 31/54 (57%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 497
EI E+P D ++R+ FCFIT+ E V LL++ +I + ++K A PK
Sbjct: 258 EIENIELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIKVAQPK 311
>gi|344284839|ref|XP_003414172.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D isoform 2
[Loxodonta africana]
Length = 363
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/155 (41%), Positives = 98/155 (63%), Gaps = 10/155 (6%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++L E+ S++GE+ + T+K+DP TGRSRGF F++FKD ASV+ V+ H ++ K
Sbjct: 162 KDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDA-----ASVDKVLELKEHKLDGK 216
Query: 174 KIEAKKAKAKSGK-----IFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNF 228
I+ K+AKA GK +FVGGLSP+ +E+IK +F FG I E+P D ++R+ F
Sbjct: 217 LIDPKRAKALKGKEPPKKVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGF 276
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
CFIT+ E V LL++ +I + ++K A PK
Sbjct: 277 CFITYTDEEPVKKLLESRYHQIGSGKCEIKVAQPK 311
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 36/47 (76%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D ++L E+ S++GE+ + T+K+DP TGRSRGF F++FKD S++K
Sbjct: 158 DTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDK 204
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 57/106 (53%), Gaps = 2/106 (1%)
Query: 157 ASVEDVIAEGN--HVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIET 214
A++ED+ N KI A K + GK+F+GGLS + +++ + ++FG +++
Sbjct: 118 ATMEDMNEYSNIEEFAEGSKINASKNQQDDGKMFIGGLSWDTSKKDLTEYLSRFGEVVDC 177
Query: 215 EMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKA 260
+ D + + F F+ F+ + V +L+ + K++ K +D K+A
Sbjct: 178 TIKTDPVTGRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRA 223
Score = 47.4 bits (111), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D E++KE+F +GEIEN+ L D T RGF FI + D E ++K
Sbjct: 243 DTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPVKK 289
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 31/54 (57%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 497
EI E+P D ++R+ FCFIT+ E V LL++ +I + ++K A PK
Sbjct: 258 EIENIELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIKVAQPK 311
>gi|332801090|ref|NP_001193929.1| heterogeneous nuclear ribonucleoprotein D-like isoform b [Homo
sapiens]
gi|114593993|ref|XP_001142118.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 1
[Pan troglodytes]
gi|397524665|ref|XP_003832309.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 3
[Pan paniscus]
gi|119626295|gb|EAX05890.1| heterogeneous nuclear ribonucleoprotein D-like, isoform CRA_b [Homo
sapiens]
gi|410248288|gb|JAA12111.1| heterogeneous nuclear ribonucleoprotein D-like [Pan troglodytes]
gi|410296198|gb|JAA26699.1| heterogeneous nuclear ribonucleoprotein D-like [Pan troglodytes]
Length = 363
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/155 (41%), Positives = 98/155 (63%), Gaps = 10/155 (6%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++L E+ S++GE+ + T+K+DP TGRSRGF F++FKD ASV+ V+ H ++ K
Sbjct: 162 KDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDA-----ASVDKVLELKEHKLDGK 216
Query: 174 KIEAKKAKAKSGK-----IFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNF 228
I+ K+AKA GK +FVGGLSP+ +E+IK +F FG I E+P D ++R+ F
Sbjct: 217 LIDPKRAKALKGKEPPKKVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGF 276
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
CFIT+ E V LL++ +I + ++K A PK
Sbjct: 277 CFITYTDEEPVKKLLESRYHQIGSGKCEIKVAQPK 311
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 36/47 (76%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D ++L E+ S++GE+ + T+K+DP TGRSRGF F++FKD S++K
Sbjct: 158 DTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDK 204
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 50/87 (57%)
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
KI A K + GK+F+GGLS + +++ + ++FG +++ + D + + F F+ F
Sbjct: 137 KINASKNQQDDGKMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLF 196
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKA 260
+ + V +L+ + K++ K +D K+A
Sbjct: 197 KDAASVDKVLELKEHKLDGKLIDPKRA 223
Score = 47.4 bits (111), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D E++KE+F +GEIEN+ L D T RGF FI + D E ++K
Sbjct: 243 DTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPVKK 289
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 31/54 (57%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 497
EI E+P D ++R+ FCFIT+ E V LL++ +I + ++K A PK
Sbjct: 258 EIENIELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIKVAQPK 311
>gi|149521754|ref|XP_001512512.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 1
[Ornithorhynchus anatinus]
gi|338723434|ref|XP_003364726.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like [Equus
caballus]
gi|426231939|ref|XP_004009994.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like [Ovis
aries]
gi|2547076|dbj|BAA22860.1| A+U-rich element RNA binding factor [Homo sapiens]
Length = 271
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/155 (41%), Positives = 98/155 (63%), Gaps = 10/155 (6%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++L E+ S++GE+ + T+K+DP TGRSRGF F++FKD ASV+ V+ H ++ K
Sbjct: 13 KDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDA-----ASVDKVLELKEHKLDGK 67
Query: 174 KIEAKKAKAKSGK-----IFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNF 228
I+ K+AKA GK +FVGGLSP+ +E+IK +F FG I E+P D ++R+ F
Sbjct: 68 LIDPKRAKALKGKEPPKKVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGF 127
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
CFIT+ E V LL++ +I + ++K A PK
Sbjct: 128 CFITYTDEEPVKKLLESRYHQIGSGKCEIKVAQPK 162
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 36/48 (75%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
D ++L E+ S++GE+ + T+K+DP TGRSRGF F++FKD S++K
Sbjct: 9 DTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKV 56
Score = 47.0 bits (110), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D E++KE+F +GEIEN+ L D T RGF FI + D E ++K
Sbjct: 94 DTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPVKK 140
Score = 42.4 bits (98), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 31/54 (57%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 497
EI E+P D ++R+ FCFIT+ E V LL++ +I + ++K A PK
Sbjct: 109 EIENIELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIKVAQPK 162
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/74 (24%), Positives = 43/74 (58%)
Query: 187 IFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNP 246
+F+GGLS + +++ + ++FG +++ + D + + F F+ F+ + V +L+
Sbjct: 1 MFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLELK 60
Query: 247 KQKINDKEVDVKKA 260
+ K++ K +D K+A
Sbjct: 61 EHKLDGKLIDPKRA 74
>gi|391332405|ref|XP_003740625.1| PREDICTED: RNA-binding protein Musashi homolog Rbp6-like
[Metaseiulus occidentalis]
Length = 259
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/205 (40%), Positives = 112/205 (54%), Gaps = 22/205 (10%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
E L+E+FSK+GEI V + DP T RSRGF F+ F D ASVE V+A G H ++ K
Sbjct: 36 EGLREYFSKFGEISEVMVMKDPTTRRSRGFGFVTFADP-----ASVEKVLANGPHELDGK 90
Query: 174 KIEAK---------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQ 224
KI+ K K ++ K+FVGGLS E++K +F QFG I + + +DK ++
Sbjct: 91 KIDPKIAFPKRAHPKMVTRTKKVFVGGLSAPTTLEDVKNYFQQFGRIEDAMLMFDKQTNR 150
Query: 225 RKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKP--EPFGVRGGRGGR----GG 278
+ F F+TFE E VV + + +IN+K V+ KKA PK P V GRG G
Sbjct: 151 HRGFGFVTFELEDVVDKVCEVHFHEINNKMVECKKAQPKEVMMPNSVARGRGAELVWPLG 210
Query: 279 RGGRGGRMAGGY--GGYGGYGGGYG 301
G A GY GGY GY G+G
Sbjct: 211 ALTEAGFPAYGYSRGGYPGYPTGFG 235
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 52/99 (52%)
Query: 165 EGNHVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQ 224
E + + +A GK+F+GGLS + E ++ +F++FG I E + D + +
Sbjct: 2 ESEVAVQSNSSSPNEAAHDPGKMFIGGLSWQTAPEGLREYFSKFGEISEVMVMKDPTTRR 61
Query: 225 RKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ F F+TF + V +L N +++ K++D K A PK
Sbjct: 62 SRGFGFVTFADPASVEKVLANGPHELDGKKIDPKIAFPK 100
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/43 (55%), Positives = 30/43 (69%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
E L+E+FSK+GEI V + DP T RSRGF F+ F D S+EK
Sbjct: 36 EGLREYFSKFGEISEVMVMKDPTTRRSRGFGFVTFADPASVEK 78
Score = 46.2 bits (108), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 47/92 (51%), Gaps = 8/92 (8%)
Query: 452 YDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKP--EPFGVRGGRGG 509
+DK ++ + F F+TFE E VV + + +IN+K V+ KKA PK P V GRG
Sbjct: 144 FDKQTNRHRGFGFVTFELEDVVDKVCEVHFHEINNKMVECKKAQPKEVMMPNSVARGRGA 203
Query: 510 R----GGRGGRGGRMAGGY--GGYGGYGGGYG 535
G G A GY GGY GY G+G
Sbjct: 204 ELVWPLGALTEAGFPAYGYSRGGYPGYPTGFG 235
>gi|444723245|gb|ELW63904.1| Heterogeneous nuclear ribonucleoprotein D-like protein [Tupaia
chinensis]
Length = 326
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/155 (41%), Positives = 98/155 (63%), Gaps = 10/155 (6%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++L E+ S++GE+ + T+K+DP TGRSRGF F++FKD ASV+ V+ H ++ K
Sbjct: 43 KDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDA-----ASVDKVLELKEHKLDGK 97
Query: 174 KIEAKKAKAKSGK-----IFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNF 228
I+ K+AKA GK +FVGGLSP+ +E+IK +F FG I E+P D ++R+ F
Sbjct: 98 LIDPKRAKALKGKEPPKKVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGF 157
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
CFIT+ E V LL++ +I + ++K A PK
Sbjct: 158 CFITYTDEEPVKKLLESRYHQIGSGKCEIKVAQPK 192
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 36/48 (75%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
D ++L E+ S++GE+ + T+K+DP TGRSRGF F++FKD S++K
Sbjct: 39 DTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKV 86
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 50/87 (57%)
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
KI A K + GK+F+GGLS + +++ + ++FG +++ + D + + F F+ F
Sbjct: 18 KINASKNQQDDGKMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLF 77
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKA 260
+ + V +L+ + K++ K +D K+A
Sbjct: 78 KDAASVDKVLELKEHKLDGKLIDPKRA 104
Score = 47.0 bits (110), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D E++KE+F +GEIEN+ L D T RGF FI + D E ++K
Sbjct: 124 DTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPVKK 170
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 31/54 (57%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 497
EI E+P D ++R+ FCFIT+ E V LL++ +I + ++K A PK
Sbjct: 139 EIENIELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIKVAQPK 192
>gi|351695029|gb|EHA97947.1| Heterogeneous nuclear ribonucleoprotein D-like protein, partial
[Heterocephalus glaber]
Length = 340
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/155 (41%), Positives = 98/155 (63%), Gaps = 10/155 (6%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++L E+ S++GE+ + T+K+DP TGRSRGF F++FKD ASV+ V+ H ++ K
Sbjct: 82 KDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDA-----ASVDKVLELKEHKLDGK 136
Query: 174 KIEAKKAKAKSGK-----IFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNF 228
I+ K+AKA GK +FVGGLSP+ +E+IK +F FG I E+P D ++R+ F
Sbjct: 137 LIDPKRAKALKGKEPPKKVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGF 196
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
CFIT+ E V LL++ +I + ++K A PK
Sbjct: 197 CFITYTDEEPVKKLLESRYHQIGSGKCEIKVAQPK 231
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 36/47 (76%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D ++L E+ S++GE+ + T+K+DP TGRSRGF F++FKD S++K
Sbjct: 78 DTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDK 124
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 57/106 (53%), Gaps = 2/106 (1%)
Query: 157 ASVEDVIAEGN--HVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIET 214
A++ED+ N KI A K + GK+F+GGLS + +++ + ++FG +++
Sbjct: 38 ATMEDMNEYSNIEEFAEGSKINASKNQQDDGKMFIGGLSWDTSKKDLTEYLSRFGEVVDC 97
Query: 215 EMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKA 260
+ D + + F F+ F+ + V +L+ + K++ K +D K+A
Sbjct: 98 TIKTDPVTGRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRA 143
Score = 47.0 bits (110), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D E++KE+F +GEIEN+ L D T RGF FI + D E ++K
Sbjct: 163 DTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPVKK 209
Score = 42.0 bits (97), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 31/54 (57%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 497
EI E+P D ++R+ FCFIT+ E V LL++ +I + ++K A PK
Sbjct: 178 EIENIELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIKVAQPK 231
>gi|281353447|gb|EFB29031.1| hypothetical protein PANDA_013362 [Ailuropoda melanoleuca]
Length = 316
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/154 (42%), Positives = 99/154 (64%), Gaps = 9/154 (5%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++LK++F+K+GE+ + T+K DPNTGRSRGF FI+FKD ASVE V+ + H ++ +
Sbjct: 68 KDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDA-----ASVEKVLDQKEHRLDGR 122
Query: 174 KIEAKKAKAKSG----KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFC 229
I+ KKA A KIFVGGL+PE +E+I+ +F +FG I E+P D ++R+ F
Sbjct: 123 VIDPKKAMAMKKDPVKKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKSNKRRGFV 182
Query: 230 FITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
FITF+ E V +L+ I+ + ++K A PK
Sbjct: 183 FITFKEEEPVKKVLEKKFHTISGSKCEIKVAQPK 216
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 38/48 (79%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
D ++LK++F+K+GE+ + T+K DPNTGRSRGF FI+FKD S+EK
Sbjct: 64 DTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKV 111
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 45/75 (60%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+FVGGLS + +++K +F +FG +++ + D + + + F FI F+ + V +L
Sbjct: 55 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQ 114
Query: 246 PKQKINDKEVDVKKA 260
+ +++ + +D KKA
Sbjct: 115 KEHRLDGRVIDPKKA 129
Score = 47.8 bits (112), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 31/44 (70%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
E+++E+F ++GEIE + L DP + + RGF FI FK+ E ++K
Sbjct: 152 EKIREYFGEFGEIEAIELPMDPKSNKRRGFVFITFKEEEPVKKV 195
>gi|71896513|ref|NP_001025523.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa) [Xenopus (Silurana)
tropicalis]
gi|52355236|gb|AAU44811.1| AUF1 [Xenopus (Silurana) tropicalis]
Length = 295
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 74/192 (38%), Positives = 112/192 (58%), Gaps = 17/192 (8%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++LK++FSK+GE+ + TLK DP TGRSRGF F++FK++E ++K V+ + H +N K
Sbjct: 52 KDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESEGVDK-----VMEQKEHKLNGK 106
Query: 174 KIEAKKAKAKS-----GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNF 228
I+ K+AKA KIFVGGLSP+ +E+I+ +F FG I E+P D ++R+ F
Sbjct: 107 VIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGTFGEIEAIELPMDNKTNKRRGF 166
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKP-----EPFGVRGGRGGR--GGRGG 281
CFITF+ E V +++ + + ++K A K + +G RGG GRGG
Sbjct: 167 CFITFKEEDPVKKIMEKKYHNVGLSKCEIKVALSKEQYQQQQQWGTRGGGSSSRPRGRGG 226
Query: 282 RGGRMAGGYGGY 293
+ GY Y
Sbjct: 227 VSQTWSQGYSNY 238
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 38/48 (79%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
D ++LK++FSK+GE+ + TLK DP TGRSRGF F++FK++E ++K
Sbjct: 48 DTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESEGVDKV 95
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 52/87 (59%)
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
KI+A K + GK+F+GGLS + +++K +F++FG +++ + D + + F F+ F
Sbjct: 27 KIDASKTEEDEGKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLF 86
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKA 260
+ V +++ + K+N K +D K+A
Sbjct: 87 KESEGVDKVMEQKEHKLNGKVIDPKRA 113
Score = 43.1 bits (100), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 30/47 (63%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D E+++E+F +GEIE + L D T + RGF FI FK+ + ++K
Sbjct: 133 DTPEEKIREYFGTFGEIEAIELPMDNKTNKRRGFCFITFKEEDPVKK 179
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 43/91 (47%), Gaps = 7/91 (7%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKP----- 498
EI E+P D ++R+ FCFITF+ E V +++ + + ++K A K
Sbjct: 148 EIEAIELPMDNKTNKRRGFCFITFKEEDPVKKIMEKKYHNVGLSKCEIKVALSKEQYQQQ 207
Query: 499 EPFGVRGGRGGR--GGRGGRGGRMAGGYGGY 527
+ +G RGG GRGG + GY Y
Sbjct: 208 QQWGTRGGGSSSRPRGRGGVSQTWSQGYSNY 238
>gi|410948034|ref|XP_003980746.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B [Felis
catus]
Length = 300
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 66/154 (42%), Positives = 99/154 (64%), Gaps = 9/154 (5%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++LK++F+K+GE+ + T+K DPNTGRSRGF FI+FKD ASVE V+ + H ++ +
Sbjct: 52 KDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDA-----ASVEKVLDQKEHRLDGR 106
Query: 174 KIEAKKAKAKSG----KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFC 229
I+ KKA A KIFVGGL+PE +E+I+ +F +FG I E+P D ++R+ F
Sbjct: 107 VIDPKKAMAMKKDPVKKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKTNKRRGFV 166
Query: 230 FITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
FITF+ E V +L+ I+ + ++K A PK
Sbjct: 167 FITFKEEEPVKKVLEKKFHTISGSKCEIKVAQPK 200
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 42/61 (68%)
Query: 591 EAKNKMVSHPGIVDKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
E + KM D ++LK++F+K+GE+ + T+K DPNTGRSRGF FI+FKD S+EK
Sbjct: 35 ERRTKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEK 94
Query: 651 A 651
Sbjct: 95 V 95
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 53/97 (54%)
Query: 164 AEGNHVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKS 223
+ I + +A+ + + K+FVGGLS + +++K +F +FG +++ + D +
Sbjct: 17 CQACRTIPRPRGDARVERERRTKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTG 76
Query: 224 QRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKA 260
+ + F FI F+ + V +L + +++ + +D KKA
Sbjct: 77 RSRGFGFILFKDAASVEKVLDQKEHRLDGRVIDPKKA 113
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 31/44 (70%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
E+++E+F ++GEIE + L DP T + RGF FI FK+ E ++K
Sbjct: 136 EKIREYFGEFGEIEAIELPMDPKTNKRRGFVFITFKEEEPVKKV 179
>gi|66911597|gb|AAH97855.1| LOC496375 protein [Xenopus laevis]
Length = 286
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/193 (37%), Positives = 113/193 (58%), Gaps = 16/193 (8%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++LK++FSK+GE+ + TLK DP TGRSRGF F++FK++E ++K V+ + H +N K
Sbjct: 43 KDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESEGVDK-----VMEQKEHKLNGK 97
Query: 174 KIEAKKAKAKS-----GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNF 228
I+ K+AKA KIFVGGLSP+ +++I+ +F FG + E+P D ++R+ F
Sbjct: 98 VIDPKRAKAMKTKEPVKKIFVGGLSPDTPEDKIREYFGTFGEVEAIELPMDNKTNKRRGF 157
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKP-----EPFGVRGGRGGRGGRGGRG 283
CFITF+ E V ++++ + + ++K A K + +G RGG R GRG
Sbjct: 158 CFITFKEEDPVKNIMEKKYHNVGLSKCEIKVALSKEQYQQQQQWGTRGGGSSSRPR-GRG 216
Query: 284 GRMAGGYGGYGGY 296
G GY Y
Sbjct: 217 GLSQSWSQGYSNY 229
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 59/104 (56%), Gaps = 2/104 (1%)
Query: 159 VEDVIAEGNHVINNK--KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEM 216
+E AE + N+ KI+A K + GK+F+GGLS + +++K +F++FG +++ +
Sbjct: 1 MEATTAETEEIGQNEGVKIDASKTEEDEGKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTL 60
Query: 217 PYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKA 260
D + + F F+ F+ V +++ + K+N K +D K+A
Sbjct: 61 KLDPITGRSRGFGFVLFKESEGVDKVMEQKEHKLNGKVIDPKRA 104
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 38/48 (79%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
D ++LK++FSK+GE+ + TLK DP TGRSRGF F++FK++E ++K
Sbjct: 39 DTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESEGVDKV 86
Score = 42.4 bits (98), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 6/92 (6%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKP----- 498
E+ E+P D ++R+ FCFITF+ E V ++++ + + ++K A K
Sbjct: 139 EVEAIELPMDNKTNKRRGFCFITFKEEDPVKNIMEKKYHNVGLSKCEIKVALSKEQYQQQ 198
Query: 499 EPFGVRGGRGGRGGRGGRGGRMAGGYGGYGGY 530
+ +G RGG R GRGG GY Y
Sbjct: 199 QQWGTRGGGSSSRPR-GRGGLSQSWSQGYSNY 229
Score = 39.7 bits (91), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 29/46 (63%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLE 649
D ++++E+F +GE+E + L D T + RGF FI FK+ + ++
Sbjct: 124 DTPEDKIREYFGTFGEVEAIELPMDNKTNKRRGFCFITFKEEDPVK 169
>gi|81917948|sp|Q9Z130.1|HNRDL_MOUSE RecName: Full=Heterogeneous nuclear ribonucleoprotein D-like;
Short=hnRNP D-like; Short=hnRNP DL; AltName:
Full=JKT41-binding protein
gi|4514631|dbj|BAA75479.1| JKTBP [Mus musculus]
gi|18203892|gb|AAH21374.1| Heterogeneous nuclear ribonucleoprotein D-like [Mus musculus]
gi|74196730|dbj|BAE43104.1| unnamed protein product [Mus musculus]
gi|148688362|gb|EDL20309.1| heterogeneous nuclear ribonucleoprotein D-like, isoform CRA_b [Mus
musculus]
Length = 301
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/155 (41%), Positives = 98/155 (63%), Gaps = 10/155 (6%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++L E+ S++GE+ + T+K+DP TGRSRGF F++FKD ASV+ V+ H ++ K
Sbjct: 43 KDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDA-----ASVDKVLELKEHKLDGK 97
Query: 174 KIEAKKAKAKSGK-----IFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNF 228
I+ K+AKA GK +FVGGLSP+ +E+IK +F FG I E+P D ++R+ F
Sbjct: 98 LIDPKRAKALKGKEPPKKVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGF 157
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
CFIT+ E V LL++ +I + ++K A PK
Sbjct: 158 CFITYTDEEPVKKLLESRYHQIGSGKCEIKVAQPK 192
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 36/47 (76%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D ++L E+ S++GE+ + T+K+DP TGRSRGF F++FKD S++K
Sbjct: 39 DTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDK 85
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 50/87 (57%)
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
KI A K + GK+F+GGLS + +++ + ++FG +++ + D + + F F+ F
Sbjct: 18 KINASKNQQDDGKMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLF 77
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKA 260
+ + V +L+ + K++ K +D K+A
Sbjct: 78 KDAASVDKVLELKEHKLDGKLIDPKRA 104
Score = 46.6 bits (109), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D E++KE+F +GEIEN+ L D T RGF FI + D E ++K
Sbjct: 124 DTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPVKK 170
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 31/54 (57%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 497
EI E+P D ++R+ FCFIT+ E V LL++ +I + ++K A PK
Sbjct: 139 EIENIELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIKVAQPK 192
>gi|440898654|gb|ELR50102.1| Heterogeneous nuclear ribonucleoprotein D-like protein, partial
[Bos grunniens mutus]
Length = 356
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/155 (41%), Positives = 98/155 (63%), Gaps = 10/155 (6%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++L E+ S++GE+ + T+K+DP TGRSRGF F++FKD ASV+ V+ H ++ K
Sbjct: 98 KDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDA-----ASVDKVLELKEHKLDGK 152
Query: 174 KIEAKKAKAKSGK-----IFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNF 228
I+ K+AKA GK +FVGGLSP+ +E+IK +F FG I E+P D ++R+ F
Sbjct: 153 LIDPKRAKALKGKEPPKKVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGF 212
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
CFIT+ E V LL++ +I + ++K A PK
Sbjct: 213 CFITYTDEEPVKKLLESRYHQIGSGKCEIKVAQPK 247
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 36/47 (76%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D ++L E+ S++GE+ + T+K+DP TGRSRGF F++FKD S++K
Sbjct: 94 DTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDK 140
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 57/106 (53%), Gaps = 2/106 (1%)
Query: 157 ASVEDVIAEGN--HVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIET 214
A++ED+ N KI A K + GK+F+GGLS + +++ + ++FG +++
Sbjct: 54 AAMEDMNEYSNIEEFAEGSKINASKNQQDDGKMFIGGLSWDTSKKDLTEYLSRFGEVVDC 113
Query: 215 EMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKA 260
+ D + + F F+ F+ + V +L+ + K++ K +D K+A
Sbjct: 114 TIKTDPVTGRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRA 159
Score = 47.0 bits (110), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D E++KE+F +GEIEN+ L D T RGF FI + D E ++K
Sbjct: 179 DTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPVKK 225
Score = 42.4 bits (98), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 31/54 (57%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 497
EI E+P D ++R+ FCFIT+ E V LL++ +I + ++K A PK
Sbjct: 194 EIENIELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIKVAQPK 247
>gi|2780748|dbj|BAA24361.1| hnRNP JKTBP [Homo sapiens]
gi|4512255|dbj|BAA75240.1| JKTBP1 [Homo sapiens]
Length = 301
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/155 (41%), Positives = 98/155 (63%), Gaps = 10/155 (6%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++L E+ S++GE+ + T+K+DP TGRSRGF F++FKD ASV+ V+ H ++ K
Sbjct: 43 KDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDA-----ASVDKVLELKEHKLDGK 97
Query: 174 KIEAKKAKAKSGK-----IFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNF 228
I+ K+AKA GK +FVGGLSP+ +E+IK +F FG I E+P D ++R+ F
Sbjct: 98 LIDPKRAKALKGKEPPKKVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGF 157
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
CFIT+ E V LL++ +I + ++K A PK
Sbjct: 158 CFITYTDEEPVKKLLESRYHQIGSGKCEIKVAQPK 192
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 36/47 (76%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D ++L E+ S++GE+ + T+K+DP TGRSRGF F++FKD S++K
Sbjct: 39 DTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDK 85
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 50/87 (57%)
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
KI A K + GK+F+GGLS + +++ + ++FG +++ + D + + F F+ F
Sbjct: 18 KINASKNQQDDGKMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLF 77
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKA 260
+ + V +L+ + K++ K +D K+A
Sbjct: 78 KDAASVDKVLELKEHKLDGKLIDPKRA 104
Score = 47.0 bits (110), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D E++KE+F +GEIEN+ L D T RGF FI + D E ++K
Sbjct: 124 DTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPVKK 170
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 31/54 (57%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 497
EI E+P D ++R+ FCFIT+ E V LL++ +I + ++K A PK
Sbjct: 139 EIENIELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIKVAQPK 192
>gi|58332392|ref|NP_001011015.1| heterogeneous nuclear ribonucleoprotein D-like [Xenopus (Silurana)
tropicalis]
gi|82234092|sp|Q640A2.1|HNRDL_XENTR RecName: Full=Heterogeneous nuclear ribonucleoprotein D-like;
Short=hnRNP D-like; Short=hnRNP DL
gi|52139122|gb|AAH82729.1| heterogeneous nuclear ribonucleoprotein D-like [Xenopus (Silurana)
tropicalis]
gi|89268223|emb|CAJ82429.1| heterogeneous nuclear ribonucleoprotein D-like [Xenopus (Silurana)
tropicalis]
Length = 297
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 64/155 (41%), Positives = 97/155 (62%), Gaps = 10/155 (6%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++L E+ S++GE+ + T+K+DP TGRSRGF F++FKD SV+ V+ H ++ K
Sbjct: 40 KDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDA-----VSVDKVLETKEHKLDGK 94
Query: 174 KIEAKKAKAKSGK-----IFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNF 228
I+ K+AKA GK +FVGGLSPE +E+IK +F FG I E+P D ++R+ F
Sbjct: 95 LIDPKRAKALKGKEPPKKVFVGGLSPETTEEQIKQYFGGFGEIENIELPMDTKTNERRGF 154
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
CF+T+ E V LL++ +I + ++K A PK
Sbjct: 155 CFVTYTGEEPVKKLLESRFHQIGTGKCEIKVAQPK 189
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 36/48 (75%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
D ++L E+ S++GE+ + T+K+DP TGRSRGF F++FKD S++K
Sbjct: 36 DTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAVSVDKV 83
Score = 52.4 bits (124), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 49/87 (56%)
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
KI A K + GK+F+GGLS + +++ + ++FG +++ + D + + F F+ F
Sbjct: 15 KINASKNQQDEGKMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLF 74
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKA 260
+ V +L+ + K++ K +D K+A
Sbjct: 75 KDAVSVDKVLETKEHKLDGKLIDPKRA 101
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 595 KMVSHPGIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
K V G+ + TEE +K++F +GEIEN+ L D T RGF F+ + E ++K
Sbjct: 111 KKVFVGGLSPETTEEQIKQYFGGFGEIENIELPMDTKTNERRGFCFVTYTGEEPVKK 167
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 31/54 (57%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 497
EI E+P D ++R+ FCF+T+ E V LL++ +I + ++K A PK
Sbjct: 136 EIENIELPMDTKTNERRGFCFVTYTGEEPVKKLLESRFHQIGTGKCEIKVAQPK 189
>gi|355687288|gb|EHH25872.1| Heterogeneous nuclear ribonucleoprotein D-like protein, partial
[Macaca mulatta]
Length = 309
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/155 (41%), Positives = 98/155 (63%), Gaps = 10/155 (6%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++L E+ S++GE+ + T+K+DP TGRSRGF F++FKD ASV+ V+ H ++ K
Sbjct: 51 KDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDA-----ASVDKVLELKEHKLDGK 105
Query: 174 KIEAKKAKAKSGK-----IFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNF 228
I+ K+AKA GK +FVGGLSP+ +E+IK +F FG I E+P D ++R+ F
Sbjct: 106 LIDPKRAKALKGKEPPKKVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGF 165
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
CFIT+ E V LL++ +I + ++K A PK
Sbjct: 166 CFITYTDEEPVKKLLESRYHQIGSGKCEIKVAQPK 200
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 36/47 (76%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D ++L E+ S++GE+ + T+K+DP TGRSRGF F++FKD S++K
Sbjct: 47 DTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDK 93
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 57/106 (53%), Gaps = 2/106 (1%)
Query: 157 ASVEDVIAEGN--HVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIET 214
A++ED+ N KI A K + GK+F+GGLS + +++ + ++FG +++
Sbjct: 7 ATMEDMNEYSNIEEFAEGSKINASKNQQDDGKMFIGGLSWDTSKKDLTEYLSRFGEVVDC 66
Query: 215 EMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKA 260
+ D + + F F+ F+ + V +L+ + K++ K +D K+A
Sbjct: 67 TIKTDPVTGRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRA 112
Score = 47.0 bits (110), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D E++KE+F +GEIEN+ L D T RGF FI + D E ++K
Sbjct: 132 DTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPVKK 178
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 31/54 (57%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 497
EI E+P D ++R+ FCFIT+ E V LL++ +I + ++K A PK
Sbjct: 147 EIENIELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIKVAQPK 200
>gi|410343159|gb|JAA40526.1| heterogeneous nuclear ribonucleoprotein A/B [Pan troglodytes]
Length = 332
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 66/154 (42%), Positives = 100/154 (64%), Gaps = 9/154 (5%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++LK++F+K+GE+ + T+K DPNTGRSRGF FI+FKD ASVE V+ + H ++ +
Sbjct: 84 KDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDA-----ASVEKVLDQKEHRLDGR 138
Query: 174 KIEAKKA----KAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFC 229
I+ KKA KA KIFVGGL+PE +E+I+ +F +FG I E+P D ++R+ F
Sbjct: 139 VIDPKKAMAMKKAPVKKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKLNKRRGFV 198
Query: 230 FITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
FITF+ E V +L+ ++ + ++K A PK
Sbjct: 199 FITFKEEEPVKKVLEKKFHTVSGSKCEIKVAQPK 232
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 38/47 (80%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D ++LK++F+K+GE+ + T+K DPNTGRSRGF FI+FKD S+EK
Sbjct: 80 DTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEK 126
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 52/87 (59%)
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
+I A K + +GK+FVGGLS + +++K +F +FG +++ + D + + + F FI F
Sbjct: 59 QINASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILF 118
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKA 260
+ + V +L + +++ + +D KKA
Sbjct: 119 KDAASVEKVLDQKEHRLDGRVIDPKKA 145
Score = 46.6 bits (109), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 10/72 (13%)
Query: 589 IVEAKNKMVSHPGIVDKI----------TEELKEHFSKYGEIENVTLKSDPNTGRSRGFA 638
+++ K M V KI E+++E+F ++GEIE + L DP + RGF
Sbjct: 139 VIDPKKAMAMKKAPVKKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKLNKRRGFV 198
Query: 639 FIVFKDTESLEK 650
FI FK+ E ++K
Sbjct: 199 FITFKEEEPVKK 210
>gi|149046813|gb|EDL99587.1| heterogeneous nuclear ribonucleoprotein D-like, isoform CRA_b
[Rattus norvegicus]
Length = 300
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/155 (41%), Positives = 98/155 (63%), Gaps = 10/155 (6%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++L E+ S++GE+ + T+K+DP TGRSRGF F++FKD ASV+ V+ H ++ K
Sbjct: 43 KDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDA-----ASVDKVLELKEHKLDGK 97
Query: 174 KIEAKKAKAKSGK-----IFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNF 228
I+ K+AKA GK +FVGGLSP+ +E+IK +F FG I E+P D ++R+ F
Sbjct: 98 LIDPKRAKALKGKEPPKKVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGF 157
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
CFIT+ E V LL++ +I + ++K A PK
Sbjct: 158 CFITYTDEEPVKKLLESRYHQIGSGKCEIKVAQPK 192
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 36/48 (75%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
D ++L E+ S++GE+ + T+K+DP TGRSRGF F++FKD S++K
Sbjct: 39 DTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKV 86
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 50/87 (57%)
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
KI A K + GK+F+GGLS + +++ + ++FG +++ + D + + F F+ F
Sbjct: 18 KINASKNQQDDGKMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLF 77
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKA 260
+ + V +L+ + K++ K +D K+A
Sbjct: 78 KDAASVDKVLELKEHKLDGKLIDPKRA 104
Score = 46.6 bits (109), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D E++KE+F +GEIEN+ L D T RGF FI + D E ++K
Sbjct: 124 DTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPVKK 170
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 31/54 (57%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 497
EI E+P D ++R+ FCFIT+ E V LL++ +I + ++K A PK
Sbjct: 139 EIENIELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIKVAQPK 192
>gi|349604934|gb|AEQ00343.1| Heteroproteinous nuclear ribonucleoprotein D-like-like protein,
partial [Equus caballus]
Length = 297
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/155 (41%), Positives = 98/155 (63%), Gaps = 10/155 (6%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++L E+ S++GE+ + T+K+DP TGRSRGF F++FKD ASV+ V+ H ++ K
Sbjct: 39 KDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDA-----ASVDKVLELKEHKLDGK 93
Query: 174 KIEAKKAKAKSGK-----IFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNF 228
I+ K+AKA GK +FVGGLSP+ +E+IK +F FG I E+P D ++R+ F
Sbjct: 94 LIDPKRAKALKGKEPPKKVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGF 153
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
CFIT+ E V LL++ +I + ++K A PK
Sbjct: 154 CFITYTDEEPVKKLLESRYHQIGSGKCEIKVAQPK 188
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 36/47 (76%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D ++L E+ S++GE+ + T+K+DP TGRSRGF F++FKD S++K
Sbjct: 35 DTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDK 81
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 50/87 (57%)
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
KI A K + GK+F+GGLS + +++ + ++FG +++ + D + + F F+ F
Sbjct: 14 KINASKNQQDDGKMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLF 73
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKA 260
+ + V +L+ + K++ K +D K+A
Sbjct: 74 KDAASVDKVLELKEHKLDGKLIDPKRA 100
Score = 47.0 bits (110), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D E++KE+F +GEIEN+ L D T RGF FI + D E ++K
Sbjct: 120 DTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPVKK 166
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 31/54 (57%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 497
EI E+P D ++R+ FCFIT+ E V LL++ +I + ++K A PK
Sbjct: 135 EIENIELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIKVAQPK 188
>gi|38327502|gb|AAR17782.1| CArG binding factor [Homo sapiens]
Length = 298
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/155 (41%), Positives = 98/155 (63%), Gaps = 10/155 (6%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++L E+ S++GE+ + T+K+DP TGRSRGF F++FKD ASV+ V+ H ++ K
Sbjct: 40 KDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDA-----ASVDKVLELKEHKLDGK 94
Query: 174 KIEAKKAKAKSGK-----IFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNF 228
I+ K+AKA GK +FVGGLSP+ +E+IK +F FG I E+P D ++R+ F
Sbjct: 95 LIDPKRAKALKGKEPPKKVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGF 154
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
CFIT+ E V LL++ +I + ++K A PK
Sbjct: 155 CFITYTDEEPVKKLLESRYHQIGSGKCEIKVAQPK 189
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 36/47 (76%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D ++L E+ S++GE+ + T+K+DP TGRSRGF F++FKD S++K
Sbjct: 36 DTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDK 82
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 50/87 (57%)
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
KI A K + GK+F+GGLS + +++ + ++FG +++ + D + + F F+ F
Sbjct: 15 KINASKNQQDDGKMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLF 74
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKA 260
+ + V +L+ + K++ K +D K+A
Sbjct: 75 KDAASVDKVLELKEHKLDGKLIDPKRA 101
Score = 47.0 bits (110), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D E++KE+F +GEIEN+ L D T RGF FI + D E ++K
Sbjct: 121 DTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPVKK 167
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 31/54 (57%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 497
EI E+P D ++R+ FCFIT+ E V LL++ +I + ++K A PK
Sbjct: 136 EIENIELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIKVAQPK 189
>gi|88682985|gb|AAI05387.1| HNRPDL protein [Bos taurus]
Length = 336
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/155 (41%), Positives = 98/155 (63%), Gaps = 10/155 (6%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++L E+ S++GE+ + T+K+DP TGRSRGF F++FKD ASV+ V+ H ++ K
Sbjct: 78 KDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDA-----ASVDKVLELKEHKLDGK 132
Query: 174 KIEAKKAKAKSGK-----IFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNF 228
I+ K+AKA GK +FVGGLSP+ +E+IK +F FG I E+P D ++R+ F
Sbjct: 133 LIDPKRAKALKGKEPPKKVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGF 192
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
CFIT+ E V LL++ +I + ++K A PK
Sbjct: 193 CFITYTDEEPVKKLLESRYHQIGSGKCEIKVAQPK 227
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 36/47 (76%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D ++L E+ S++GE+ + T+K+DP TGRSRGF F++FKD S++K
Sbjct: 74 DTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDK 120
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 57/106 (53%), Gaps = 2/106 (1%)
Query: 157 ASVEDVIAEGN--HVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIET 214
A++ED+ N KI A K + GK+F+GGLS + +++ + ++FG +++
Sbjct: 34 AAMEDMNEYSNIEEFAEGSKINASKNQQDDGKMFIGGLSWDTSKKDLTEYLSRFGEVVDC 93
Query: 215 EMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKA 260
+ D + + F F+ F+ + V +L+ + K++ K +D K+A
Sbjct: 94 TIKTDPVTGRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRA 139
Score = 47.0 bits (110), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D E++KE+F +GEIEN+ L D T RGF FI + D E ++K
Sbjct: 159 DTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPVKK 205
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 31/54 (57%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 497
EI E+P D ++R+ FCFIT+ E V LL++ +I + ++K A PK
Sbjct: 174 EIENIELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIKVAQPK 227
>gi|301777376|ref|XP_002924104.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B-like
[Ailuropoda melanoleuca]
Length = 261
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 66/154 (42%), Positives = 99/154 (64%), Gaps = 9/154 (5%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++LK++F+K+GE+ + T+K DPNTGRSRGF FI+FKD ASVE V+ + H ++ +
Sbjct: 13 KDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDA-----ASVEKVLDQKEHRLDGR 67
Query: 174 KIEAKKAKAKSG----KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFC 229
I+ KKA A KIFVGGL+PE +E+I+ +F +FG I E+P D ++R+ F
Sbjct: 68 VIDPKKAMAMKKDPVKKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKSNKRRGFV 127
Query: 230 FITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
FITF+ E V +L+ I+ + ++K A PK
Sbjct: 128 FITFKEEEPVKKVLEKKFHTISGSKCEIKVAQPK 161
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 38/48 (79%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
D ++LK++F+K+GE+ + T+K DPNTGRSRGF FI+FKD S+EK
Sbjct: 9 DTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKV 56
Score = 47.4 bits (111), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 31/44 (70%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
E+++E+F ++GEIE + L DP + + RGF FI FK+ E ++K
Sbjct: 97 EKIREYFGEFGEIEAIELPMDPKSNKRRGFVFITFKEEEPVKKV 140
Score = 46.2 bits (108), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 44/74 (59%)
Query: 187 IFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNP 246
+FVGGLS + +++K +F +FG +++ + D + + + F FI F+ + V +L
Sbjct: 1 MFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQK 60
Query: 247 KQKINDKEVDVKKA 260
+ +++ + +D KKA
Sbjct: 61 EHRLDGRVIDPKKA 74
>gi|344284992|ref|XP_003414248.1| PREDICTED: hypothetical protein LOC100654996 [Loxodonta africana]
Length = 595
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 63/155 (40%), Positives = 99/155 (63%), Gaps = 10/155 (6%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++LK++FSK+GE+ + TLK DP TGRSRGF F++FK++ES++K V+ + H +N K
Sbjct: 351 KDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDK-----VMDQKEHKLNGK 405
Query: 174 KIEAKKAKAKS-----GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNF 228
I+ K+AKA KIFVGGLSP+ +E+I+ +F FG + E+P D ++R+ F
Sbjct: 406 VIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGF 465
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
CFITF+ E V +++ + + ++K A K
Sbjct: 466 CFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSK 500
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 39/47 (82%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D ++LK++FSK+GE+ + TLK DP TGRSRGF F++FK++ES++K
Sbjct: 347 DTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDK 393
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 50/88 (56%)
Query: 173 KKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFIT 232
+ EA A+ + K+F+GGLS + +++K +F++FG +++ + D + + F F+
Sbjct: 325 RHTEAATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVL 384
Query: 233 FEHESVVIDLLKNPKQKINDKEVDVKKA 260
F+ V ++ + K+N K +D K+A
Sbjct: 385 FKESESVDKVMDQKEHKLNGKVIDPKRA 412
Score = 45.4 bits (106), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D E+++E+F +GE+E++ L D T + RGF FI FK+ E ++K
Sbjct: 432 DTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 478
>gi|4378711|gb|AAD19638.1| nucleic acid binding factor pRM10 [Rattus norvegicus]
Length = 298
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 65/154 (42%), Positives = 100/154 (64%), Gaps = 9/154 (5%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++LK++F+K+GE+ + T+K DPNTGRSRGF FI+FKD+ +SVE V+ + H ++ +
Sbjct: 102 KDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDS-----SSVEKVLDQKEHRLDGR 156
Query: 174 KIEAKKAKAKSG----KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFC 229
I+ KKA A KIFVGGL+PE +E+I+ +F QFG I E+P D ++R+ F
Sbjct: 157 VIDPKKAMAMKKDPVKKIFVGGLNPEATEEKIREYFGQFGEIEAIELPIDPKLNKRRGFV 216
Query: 230 FITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
FITF+ E V +L+ ++ + ++K A PK
Sbjct: 217 FITFKEEDPVKKVLEKKFHTVSGSKCEIKVAQPK 250
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 39/48 (81%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
D ++LK++F+K+GE+ + T+K DPNTGRSRGF FI+FKD+ S+EK
Sbjct: 98 DTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDSSSVEKV 145
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 54/95 (56%)
Query: 166 GNHVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQR 225
GN +I A K + +GK+FVGGLS + +++K +F +FG +++ + D + +
Sbjct: 69 GNQNGEGDQINASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRS 128
Query: 226 KNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKA 260
+ F FI F+ S V +L + +++ + +D KKA
Sbjct: 129 RGFGFILFKDSSSVEKVLDQKEHRLDGRVIDPKKA 163
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 10/73 (13%)
Query: 589 IVEAKNKMVSHPGIVDKI----------TEELKEHFSKYGEIENVTLKSDPNTGRSRGFA 638
+++ K M V KI E+++E+F ++GEIE + L DP + RGF
Sbjct: 157 VIDPKKAMAMKKDPVKKIFVGGLNPEATEEKIREYFGQFGEIEAIELPIDPKLNKRRGFV 216
Query: 639 FIVFKDTESLEKA 651
FI FK+ + ++K
Sbjct: 217 FITFKEEDPVKKV 229
>gi|355694953|gb|AER99843.1| heteroproteinous nuclear ribonucleoprotein D-like protein [Mustela
putorius furo]
Length = 294
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 65/155 (41%), Positives = 98/155 (63%), Gaps = 10/155 (6%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++L E+ S++GE+ + T+K+DP TGRSRGF F++FKD ASV+ V+ H ++ K
Sbjct: 107 KDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDA-----ASVDKVLELKEHKLDGK 161
Query: 174 KIEAKKAKAKSGK-----IFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNF 228
I+ K+AKA GK +FVGGLSP+ +E+IK +F FG I E+P D ++R+ F
Sbjct: 162 LIDPKRAKALKGKEPPKKVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGF 221
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
CFIT+ E V LL++ +I + ++K A PK
Sbjct: 222 CFITYTDEEPVKKLLESRYHQIGSGKCEIKVAQPK 256
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 36/47 (76%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D ++L E+ S++GE+ + T+K+DP TGRSRGF F++FKD S++K
Sbjct: 103 DTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDK 149
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 57/106 (53%), Gaps = 2/106 (1%)
Query: 157 ASVEDVIAEGN--HVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIET 214
A++EDV N KI A K + GK+F+GGLS + +++ + ++FG +++
Sbjct: 63 AAMEDVSEYSNIEEFAEGSKINASKNQQDDGKMFIGGLSWDTSKKDLTEYLSRFGEVVDC 122
Query: 215 EMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKA 260
+ D + + F F+ F+ + V +L+ + K++ K +D K+A
Sbjct: 123 TIKTDPVTGRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRA 168
Score = 46.6 bits (109), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D E++KE+F +GEIEN+ L D T RGF FI + D E ++K
Sbjct: 188 DTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPVKK 234
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 31/54 (57%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 497
EI E+P D ++R+ FCFIT+ E V LL++ +I + ++K A PK
Sbjct: 203 EIENIELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIKVAQPK 256
>gi|148235805|ref|NP_001079609.1| heterogeneous nuclear ribonucleoprotein D-like-A [Xenopus laevis]
gi|82241529|sp|Q7ZX83.1|HNDLA_XENLA RecName: Full=Heterogeneous nuclear ribonucleoprotein D-like-A;
Short=hnRNP D-like A; Short=hnRNP DL-A
gi|28175291|gb|AAH45124.1| MGC53310 protein [Xenopus laevis]
Length = 293
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 64/155 (41%), Positives = 97/155 (62%), Gaps = 10/155 (6%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++L E+ S++GE+ + T+K+DP TGRSRGF F++FKD SV+ V+ H ++ K
Sbjct: 40 KDLTEYLSRFGEVLDCTIKTDPVTGRSRGFGFVLFKDA-----VSVDKVLETNEHKLDGK 94
Query: 174 KIEAKKAKAKSGK-----IFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNF 228
I+ K+AKA GK +FVGGLSPE +E+IK +F FG I E+P D ++R+ F
Sbjct: 95 LIDPKRAKALKGKEPPKKVFVGGLSPETTEEQIKQYFGGFGEIENIELPIDTKTNERRGF 154
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
CF+T+ E V LL++ +I + ++K A PK
Sbjct: 155 CFVTYTGEEPVKKLLESRFHQIGTGKCEIKAAQPK 189
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 36/47 (76%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D ++L E+ S++GE+ + T+K+DP TGRSRGF F++FKD S++K
Sbjct: 36 DTSKKDLTEYLSRFGEVLDCTIKTDPVTGRSRGFGFVLFKDAVSVDK 82
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 49/87 (56%)
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
KI A K + GK+F+GGLS + +++ + ++FG +++ + D + + F F+ F
Sbjct: 15 KINASKNQQDEGKMFIGGLSWDTSKKDLTEYLSRFGEVLDCTIKTDPVTGRSRGFGFVLF 74
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKA 260
+ V +L+ + K++ K +D K+A
Sbjct: 75 KDAVSVDKVLETNEHKLDGKLIDPKRA 101
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 31/54 (57%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 497
EI E+P D ++R+ FCF+T+ E V LL++ +I + ++K A PK
Sbjct: 136 EIENIELPIDTKTNERRGFCFVTYTGEEPVKKLLESRFHQIGTGKCEIKAAQPK 189
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
G+ + TEE +K++F +GEIEN+ L D T RGF F+ + E ++K
Sbjct: 117 GLSPETTEEQIKQYFGGFGEIENIELPIDTKTNERRGFCFVTYTGEEPVKK 167
>gi|15010818|dbj|BAB62188.1| JKTBP1delta6 [Homo sapiens]
Length = 244
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 65/155 (41%), Positives = 98/155 (63%), Gaps = 10/155 (6%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++L E+ S++GE+ + T+K+DP TGRSRGF F++FKD ASV+ V+ H ++ K
Sbjct: 43 KDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDA-----ASVDKVLELKEHKLDGK 97
Query: 174 KIEAKKAKAKSGK-----IFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNF 228
I+ K+AKA GK +FVGGLSP+ +E+IK +F FG I E+P D ++R+ F
Sbjct: 98 LIDPKRAKALKGKEPPKKVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGF 157
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
CFIT+ E V LL++ +I + ++K A PK
Sbjct: 158 CFITYTDEEPVKKLLESRYHQIGSGKCEIKVAQPK 192
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 36/48 (75%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
D ++L E+ S++GE+ + T+K+DP TGRSRGF F++FKD S++K
Sbjct: 39 DTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKV 86
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 50/87 (57%)
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
KI A K + GK+F+GGLS + +++ + ++FG +++ + D + + F F+ F
Sbjct: 18 KINASKNQQDDGKMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLF 77
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKA 260
+ + V +L+ + K++ K +D K+A
Sbjct: 78 KDAASVDKVLELKEHKLDGKLIDPKRA 104
Score = 46.6 bits (109), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D E++KE+F +GEIEN+ L D T RGF FI + D E ++K
Sbjct: 124 DTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPVKK 170
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 31/54 (57%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 497
EI E+P D ++R+ FCFIT+ E V LL++ +I + ++K A PK
Sbjct: 139 EIENIELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIKVAQPK 192
>gi|440898381|gb|ELR49895.1| Heterogeneous nuclear ribonucleoprotein A/B, partial [Bos grunniens
mutus]
Length = 262
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 66/154 (42%), Positives = 99/154 (64%), Gaps = 9/154 (5%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++LK++F+K+GE+ + T+K DPNTGRSRGF FI+FKD ASVE V+ + H ++ +
Sbjct: 14 KDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDA-----ASVEKVLDQKEHRLDGR 68
Query: 174 KIEAKKAKAKSG----KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFC 229
I+ KKA A KIFVGGL+PE +E+I+ +F +FG I E+P D ++R+ F
Sbjct: 69 VIDPKKAMAMKKDPVKKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKSNKRRGFV 128
Query: 230 FITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
FITF+ E V +L+ I+ + ++K A PK
Sbjct: 129 FITFKEEEPVKKVLEKKFHTISGSKCEIKVAQPK 162
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 38/48 (79%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
D ++LK++F+K+GE+ + T+K DPNTGRSRGF FI+FKD S+EK
Sbjct: 10 DTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKV 57
Score = 47.4 bits (111), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 45/75 (60%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+FVGGLS + +++K +F +FG +++ + D + + + F FI F+ + V +L
Sbjct: 1 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQ 60
Query: 246 PKQKINDKEVDVKKA 260
+ +++ + +D KKA
Sbjct: 61 KEHRLDGRVIDPKKA 75
Score = 47.4 bits (111), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 31/44 (70%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
E+++E+F ++GEIE + L DP + + RGF FI FK+ E ++K
Sbjct: 98 EKIREYFGEFGEIEAIELPMDPKSNKRRGFVFITFKEEEPVKKV 141
>gi|410343157|gb|JAA40525.1| heterogeneous nuclear ribonucleoprotein A/B [Pan troglodytes]
Length = 285
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 66/153 (43%), Positives = 99/153 (64%), Gaps = 9/153 (5%)
Query: 115 ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNKK 174
+LK++F+K+GE+ + T+K DPNTGRSRGF FI+FKD ASVE V+ + H ++ +
Sbjct: 85 DLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDA-----ASVEKVLDQKEHRLDGRV 139
Query: 175 IEAKKA----KAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCF 230
I+ KKA KA KIFVGGL+PE +E+I+ +F +FG I E+P D ++R+ F F
Sbjct: 140 IDPKKAMAMKKAPVKKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVF 199
Query: 231 ITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
ITF+ E V +L+ ++ + ++K A PK
Sbjct: 200 ITFKEEEPVKKVLEKKFHTVSGSKCEIKVAQPK 232
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 38/47 (80%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D ++LK++F+K+GE+ + T+K DPNTGRSRGF FI+FKD S+EK
Sbjct: 80 DTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEK 126
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 52/87 (59%)
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
+I A K + +GK+FVGGLS + +++K +F +FG +++ + D + + + F FI F
Sbjct: 59 QINASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILF 118
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKA 260
+ + V +L + +++ + +D KKA
Sbjct: 119 KDAASVEKVLDQKEHRLDGRVIDPKKA 145
Score = 46.6 bits (109), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 10/94 (10%)
Query: 567 LTVSCSHYHYLFDQNLRTHYFYIVEAKNKMVSHPGIVDKI----------TEELKEHFSK 616
L + + DQ +++ K M V KI E+++E+F +
Sbjct: 117 LFKDAASVEKVLDQKEHRLDGRVIDPKKAMAMKKAPVKKIFVGGLNPEATEEKIREYFGE 176
Query: 617 YGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+GEIE + L DP + RGF FI FK+ E ++K
Sbjct: 177 FGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKK 210
>gi|291401535|ref|XP_002717031.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D [Oryctolagus
cuniculus]
Length = 448
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 63/155 (40%), Positives = 99/155 (63%), Gaps = 10/155 (6%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++LK++FSK+GE+ + TLK DP TGRSRGF F++FK++ES++K V+ + H +N K
Sbjct: 204 KDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDK-----VMDQKEHKLNGK 258
Query: 174 KIEAKKAKAKS-----GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNF 228
I+ K+AKA KIFVGGLSP+ +E+I+ +F FG + E+P D ++R+ F
Sbjct: 259 VIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGF 318
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
CFITF+ E V +++ + + ++K A K
Sbjct: 319 CFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSK 353
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 39/47 (82%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D ++LK++FSK+GE+ + TLK DP TGRSRGF F++FK++ES++K
Sbjct: 200 DTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDK 246
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 50/88 (56%)
Query: 173 KKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFIT 232
+ EA A+ + K+F+GGLS + +++K +F++FG +++ + D + + F F+
Sbjct: 178 RHTEAAAAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVL 237
Query: 233 FEHESVVIDLLKNPKQKINDKEVDVKKA 260
F+ V ++ + K+N K +D K+A
Sbjct: 238 FKESESVDKVMDQKEHKLNGKVIDPKRA 265
Score = 45.4 bits (106), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D E+++E+F +GE+E++ L D T + RGF FI FK+ E ++K
Sbjct: 285 DTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 331
>gi|433344|gb|AAC50056.1| p37 AUF1 [Homo sapiens]
Length = 286
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 69/173 (39%), Positives = 107/173 (61%), Gaps = 15/173 (8%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++LK++FSK+GE+ + TLK DP TGRSRGF F++FK++ES++K V+ + H +N K
Sbjct: 90 KDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDK-----VMDQKEHKLNGK 144
Query: 174 KIEAKKAKAKS-----GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNF 228
I+ K+AKA KIFVGGLSP+ +E+I+ +F FG + E+P D ++R+ F
Sbjct: 145 VIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGF 204
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKP-----EPFGVRGGRGGR 276
CFITF+ E V +++ + + ++K A K + +G RGG GR
Sbjct: 205 CFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSKEQYQQQQQWGSRGGFAGR 257
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 39/47 (82%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D ++LK++FSK+GE+ + TLK DP TGRSRGF F++FK++ES++K
Sbjct: 86 DTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDK 132
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 51/87 (58%)
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
KI+A K + GK+F+GGLS + +++K +F++FG +++ + D + + F F+ F
Sbjct: 65 KIDASKNEEDEGKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLF 124
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKA 260
+ V ++ + K+N K +D K+A
Sbjct: 125 KESESVDKVMDQKEHKLNGKVIDPKRA 151
Score = 44.3 bits (103), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D E+++E+F +GE+E++ L D T + RGF FI FK+ E ++K
Sbjct: 171 DTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 217
Score = 40.0 bits (92), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 5/72 (6%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKP----- 498
E+ E+P D ++R+ FCFITF+ E V +++ + + ++K A K
Sbjct: 186 EVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSKEQYQQQ 245
Query: 499 EPFGVRGGRGGR 510
+ +G RGG GR
Sbjct: 246 QQWGSRGGFAGR 257
>gi|3377279|dbj|BAA32032.1| AlF-C1 [Rattus norvegicus]
Length = 331
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 65/154 (42%), Positives = 100/154 (64%), Gaps = 9/154 (5%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++LK++F+K+GE+ + T+K DPNTGRSRGF FI+FKD+ S+EK V+ + H ++ +
Sbjct: 88 KDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDSSSVEK-----VLDQKEHRLDGR 142
Query: 174 KIEAKKAKAKSG----KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFC 229
I+ KKA A KIFVGGL+PE +E+I+ +F QFG I E+P D ++R+ F
Sbjct: 143 VIDPKKAMAMKKDPVKKIFVGGLNPEATEEKIREYFGQFGEIEAIELPIDPKLNKRRGFV 202
Query: 230 FITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
FITF+ E V +L+ ++ + ++K A PK
Sbjct: 203 FITFKEEDPVKKVLEKKFHTVSGSKCEIKVAQPK 236
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 39/47 (82%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D ++LK++F+K+GE+ + T+K DPNTGRSRGF FI+FKD+ S+EK
Sbjct: 84 DTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDSSSVEK 130
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 52/87 (59%)
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
+I A K + +GK+FVGGLS + +++K +F +FG +++ + D + + + F FI F
Sbjct: 63 QINASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILF 122
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKA 260
+ S V +L + +++ + +D KKA
Sbjct: 123 KDSSSVEKVLDQKEHRLDGRVIDPKKA 149
Score = 45.4 bits (106), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 10/94 (10%)
Query: 567 LTVSCSHYHYLFDQNLRTHYFYIVEAKNKMVSHPGIVDKI----------TEELKEHFSK 616
L S + DQ +++ K M V KI E+++E+F +
Sbjct: 121 LFKDSSSVEKVLDQKEHRLDGRVIDPKKAMAMKKDPVKKIFVGGLNPEATEEKIREYFGQ 180
Query: 617 YGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+GEIE + L DP + RGF FI FK+ + ++K
Sbjct: 181 FGEIEAIELPIDPKLNKRRGFVFITFKEEDPVKK 214
>gi|332822801|ref|XP_518142.3| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B [Pan
troglodytes]
Length = 338
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 65/154 (42%), Positives = 99/154 (64%), Gaps = 9/154 (5%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++LK++F+K+GE+ + T+K DPNTGRSRGF FI+FKD ASVE V+ + H ++ +
Sbjct: 90 KDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDA-----ASVEKVLDQKEHRLDGR 144
Query: 174 KIEAKKAKAKSG----KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFC 229
I+ KKA A KIFVGGL+PE +E+I+ +F +FG I E+P D ++R+ F
Sbjct: 145 VIDPKKAMAMKKDPVKKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKLNKRRGFV 204
Query: 230 FITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
FITF+ E V +L+ ++ + ++K A PK
Sbjct: 205 FITFKEEEPVKKVLEKKFHTVSGSKCEIKVAQPK 238
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 38/47 (80%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D ++LK++F+K+GE+ + T+K DPNTGRSRGF FI+FKD S+EK
Sbjct: 86 DTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEK 132
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 52/87 (59%)
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
+I A K + +GK+FVGGLS + +++K +F +FG +++ + D + + + F FI F
Sbjct: 65 QINASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILF 124
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKA 260
+ + V +L + +++ + +D KKA
Sbjct: 125 KDAASVEKVLDQKEHRLDGRVIDPKKA 151
Score = 46.2 bits (108), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 30/43 (69%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
E+++E+F ++GEIE + L DP + RGF FI FK+ E ++K
Sbjct: 174 EKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKK 216
>gi|291387921|ref|XP_002710458.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B [Oryctolagus
cuniculus]
Length = 306
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 65/154 (42%), Positives = 99/154 (64%), Gaps = 9/154 (5%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++LK++F+K+GE+ + T+K DPNTGRSRGF FI+FKD S+EK V+ + H ++ +
Sbjct: 58 KDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDATSVEK-----VLDQKEHRLDGR 112
Query: 174 KIEAKKAKAKSG----KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFC 229
I+ KKA A KIFVGGL+PE +E+I+ +F +FG I E+P D ++R+ F
Sbjct: 113 VIDPKKAMAMKKDPVKKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKSNKRRGFV 172
Query: 230 FITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
FITF+ E V +L+ I+ + ++K A PK
Sbjct: 173 FITFKEEDPVKKVLEKKFHTISGSKCEIKVAQPK 206
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 38/48 (79%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
D ++LK++F+K+GE+ + T+K DPNTGRSRGF FI+FKD S+EK
Sbjct: 54 DTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDATSVEKV 101
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 51/85 (60%)
Query: 176 EAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEH 235
E+ + + +GK+FVGGLS + +++K +F +FG +++ + D + + + F FI F+
Sbjct: 35 ESAENEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKD 94
Query: 236 ESVVIDLLKNPKQKINDKEVDVKKA 260
+ V +L + +++ + +D KKA
Sbjct: 95 ATSVEKVLDQKEHRLDGRVIDPKKA 119
Score = 46.2 bits (108), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
G+ + TEE ++E+F ++GEIE + L DP + + RGF FI FK+ + ++K
Sbjct: 134 GLNPEATEEKIREYFGEFGEIEAIELPMDPKSNKRRGFVFITFKEEDPVKKV 185
>gi|426229395|ref|XP_004008776.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B isoform 2
[Ovis aries]
Length = 332
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 66/153 (43%), Positives = 98/153 (64%), Gaps = 9/153 (5%)
Query: 115 ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNKK 174
+LK++F+K+GE+ + T+K DPNTGRSRGF FI+FKD ASVE V+ + H ++ +
Sbjct: 85 DLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDA-----ASVEKVLDQKEHRLDGRV 139
Query: 175 IEAKKAKAKSG----KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCF 230
I+ KKA A KIFVGGL+PE +E+I+ +F +FG I E+P D ++R+ F F
Sbjct: 140 IDPKKAMAMKKDPVKKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKSNKRRGFVF 199
Query: 231 ITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
ITF+ E V +L+ I+ + ++K A PK
Sbjct: 200 ITFKEEEPVKKVLEKKFHTISGSKCEIKVAQPK 232
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 38/47 (80%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D ++LK++F+K+GE+ + T+K DPNTGRSRGF FI+FKD S+EK
Sbjct: 80 DTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEK 126
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 52/87 (59%)
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
+I A K + +GK+FVGGLS + +++K +F +FG +++ + D + + + F FI F
Sbjct: 59 QINASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILF 118
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKA 260
+ + V +L + +++ + +D KKA
Sbjct: 119 KDAASVEKVLDQKEHRLDGRVIDPKKA 145
Score = 47.0 bits (110), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
G+ + TEE ++E+F ++GEIE + L DP + + RGF FI FK+ E ++K
Sbjct: 160 GLNPEATEEKIREYFGEFGEIEAIELPMDPKSNKRRGFVFITFKEEEPVKK 210
>gi|332265255|ref|XP_003281643.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B [Nomascus
leucogenys]
Length = 261
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 66/154 (42%), Positives = 99/154 (64%), Gaps = 9/154 (5%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++LK++F+K+GE+ + T+K DPNTGRSRGF FI+FKD ASVE V+ + H ++ +
Sbjct: 13 KDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDA-----ASVEKVLDQKEHRLDGR 67
Query: 174 KIEAKKAKAKSG----KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFC 229
I+ KKA A KIFVGGL+PE +E+I+ +F +FG I E+P D ++R+ F
Sbjct: 68 VIDPKKAMAMKKDPVKKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKLNKRRGFV 127
Query: 230 FITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
FITF+ E V +L+ I+ + ++K A PK
Sbjct: 128 FITFKEEEPVKKVLEKKFHTISGSKCEIKVAQPK 161
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 38/48 (79%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
D ++LK++F+K+GE+ + T+K DPNTGRSRGF FI+FKD S+EK
Sbjct: 9 DTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKV 56
Score = 46.6 bits (109), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 30/44 (68%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
E+++E+F ++GEIE + L DP + RGF FI FK+ E ++K
Sbjct: 97 EKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKKV 140
Score = 46.2 bits (108), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 44/74 (59%)
Query: 187 IFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNP 246
+FVGGLS + +++K +F +FG +++ + D + + + F FI F+ + V +L
Sbjct: 1 MFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQK 60
Query: 247 KQKINDKEVDVKKA 260
+ +++ + +D KKA
Sbjct: 61 EHRLDGRVIDPKKA 74
>gi|355691911|gb|EHH27096.1| hypothetical protein EGK_17210, partial [Macaca mulatta]
gi|355750475|gb|EHH54813.1| hypothetical protein EGM_15724, partial [Macaca fascicularis]
Length = 262
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 66/154 (42%), Positives = 99/154 (64%), Gaps = 9/154 (5%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++LK++F+K+GE+ + T+K DPNTGRSRGF FI+FKD ASVE V+ + H ++ +
Sbjct: 14 KDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDA-----ASVEKVLDQKEHRLDGR 68
Query: 174 KIEAKKAKAKSG----KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFC 229
I+ KKA A KIFVGGL+PE +E+I+ +F +FG I E+P D ++R+ F
Sbjct: 69 VIDPKKAMAMKKDPVKKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKLNKRRGFV 128
Query: 230 FITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
FITF+ E V +L+ I+ + ++K A PK
Sbjct: 129 FITFKEEEPVKKVLEKKFHTISGSKCEIKVAQPK 162
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 38/48 (79%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
D ++LK++F+K+GE+ + T+K DPNTGRSRGF FI+FKD S+EK
Sbjct: 10 DTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKV 57
Score = 47.8 bits (112), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 45/75 (60%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+FVGGLS + +++K +F +FG +++ + D + + + F FI F+ + V +L
Sbjct: 1 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQ 60
Query: 246 PKQKINDKEVDVKKA 260
+ +++ + +D KKA
Sbjct: 61 KEHRLDGRVIDPKKA 75
Score = 46.6 bits (109), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 30/44 (68%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
E+++E+F ++GEIE + L DP + RGF FI FK+ E ++K
Sbjct: 98 EKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKKV 141
>gi|508270|gb|AAA64654.1| A+U-rich RNA-binding protein [Mus musculus]
Length = 269
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 68/169 (40%), Positives = 106/169 (62%), Gaps = 15/169 (8%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++LK++FSK+GE+ + TLK DP TGRSRGF F++FK++ES++K V+ + H +N K
Sbjct: 80 KDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDK-----VMDQKEHKLNGK 134
Query: 174 KIEAKKAKAKS-----GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNF 228
I+ K+AKA KIFVGGLSP+ +E+I+ +F FG + E+P DK ++R+ F
Sbjct: 135 VIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDKKTNKRRGF 194
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKP-----EPFGVRGG 272
CFITF+ E V +++ + + ++K A K + +G RGG
Sbjct: 195 CFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSKEQYQQQQQWGSRGG 243
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 39/47 (82%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D ++LK++FSK+GE+ + TLK DP TGRSRGF F++FK++ES++K
Sbjct: 76 DTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDK 122
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 54/96 (56%)
Query: 165 EGNHVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQ 224
EG+ + + EA A+ + K+F+GGLS + +++K +F++FG +++ + D +
Sbjct: 46 EGHSNSSPRHTEAAAAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGR 105
Query: 225 RKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKA 260
+ F F+ F+ V ++ + K+N K +D K+A
Sbjct: 106 SRGFGFVLFKESESVDKVMDQKEHKLNGKVIDPKRA 141
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D E+++E+F +GE+E++ L D T + RGF FI FK+ E ++K
Sbjct: 161 DTPEEKIREYFGGFGEVESIELPMDKKTNKRRGFCFITFKEEEPVKK 207
Score = 39.3 bits (90), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 5/68 (7%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKP----- 498
E+ E+P DK ++R+ FCFITF+ E V +++ + + ++K A K
Sbjct: 176 EVESIELPMDKKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSKEQYQQQ 235
Query: 499 EPFGVRGG 506
+ +G RGG
Sbjct: 236 QQWGSRGG 243
>gi|293334069|ref|NP_001168848.1| uncharacterized protein LOC100382653 [Zea mays]
gi|392351175|ref|XP_003750865.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B-like isoform
2 [Rattus norvegicus]
gi|6562845|emb|CAB62553.1| heterogeneous nuclear ribonucleoprotein [Rattus norvegicus]
gi|149052496|gb|EDM04313.1| rCG34663, isoform CRA_a [Rattus norvegicus]
gi|223973327|gb|ACN30851.1| unknown [Zea mays]
Length = 332
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 65/154 (42%), Positives = 100/154 (64%), Gaps = 9/154 (5%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++LK++F+K+GE+ + T+K DPNTGRSRGF FI+FKD+ S+EK V+ + H ++ +
Sbjct: 89 KDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDSSSVEK-----VLDQKEHRLDGR 143
Query: 174 KIEAKKAKAKSG----KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFC 229
I+ KKA A KIFVGGL+PE +E+I+ +F QFG I E+P D ++R+ F
Sbjct: 144 VIDPKKAMAMKKDPVKKIFVGGLNPEATEEKIREYFGQFGEIEAIELPIDPKLNKRRGFV 203
Query: 230 FITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
FITF+ E V +L+ ++ + ++K A PK
Sbjct: 204 FITFKEEDPVKKVLEKKFHTVSGSKCEIKVAQPK 237
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 39/47 (82%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D ++LK++F+K+GE+ + T+K DPNTGRSRGF FI+FKD+ S+EK
Sbjct: 85 DTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDSSSVEK 131
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 52/87 (59%)
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
+I A K + +GK+FVGGLS + +++K +F +FG +++ + D + + + F FI F
Sbjct: 64 QINASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILF 123
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKA 260
+ S V +L + +++ + +D KKA
Sbjct: 124 KDSSSVEKVLDQKEHRLDGRVIDPKKA 150
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 10/94 (10%)
Query: 567 LTVSCSHYHYLFDQNLRTHYFYIVEAKNKMVSHPGIVDKI----------TEELKEHFSK 616
L S + DQ +++ K M V KI E+++E+F +
Sbjct: 122 LFKDSSSVEKVLDQKEHRLDGRVIDPKKAMAMKKDPVKKIFVGGLNPEATEEKIREYFGQ 181
Query: 617 YGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+GEIE + L DP + RGF FI FK+ + ++K
Sbjct: 182 FGEIEAIELPIDPKLNKRRGFVFITFKEEDPVKK 215
>gi|162951821|ref|NP_001106165.1| heterogeneous nuclear ribonucleoprotein A/B [Sus scrofa]
gi|160858224|dbj|BAF93845.1| CArG-binding factor A [Sus scrofa]
Length = 302
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 66/153 (43%), Positives = 98/153 (64%), Gaps = 9/153 (5%)
Query: 115 ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNKK 174
+LK++F+K+GE+ + T+K DPNTGRSRGF FI+FKD ASVE V+ + H ++ +
Sbjct: 101 DLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDA-----ASVEKVLDQKEHRLDGRV 155
Query: 175 IEAKKAKAKSG----KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCF 230
I+ KKA A KIFVGGL+PE +E+I+ +F +FG I E+P D ++R+ F F
Sbjct: 156 IDPKKAMAMKKDPVKKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKSNKRRGFVF 215
Query: 231 ITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
ITF+ E V +L+ I+ + ++K A PK
Sbjct: 216 ITFKEEEPVKKVLEKKFHTISGSKCEIKVAQPK 248
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 38/47 (80%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D ++LK++F+K+GE+ + T+K DPNTGRSRGF FI+FKD S+EK
Sbjct: 96 DTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEK 142
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 52/87 (59%)
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
+I A K + +GK+FVGGLS + +++K +F +FG +++ + D + + + F FI F
Sbjct: 75 QINASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILF 134
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKA 260
+ + V +L + +++ + +D KKA
Sbjct: 135 KDAASVEKVLDQKEHRLDGRVIDPKKA 161
Score = 47.4 bits (111), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
G+ + TEE ++E+F ++GEIE + L DP + + RGF FI FK+ E ++K
Sbjct: 176 GLNPEATEEKIREYFGEFGEIEAIELPMDPKSNKRRGFVFITFKEEEPVKK 226
>gi|426232266|ref|XP_004010154.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 [Ovis aries]
Length = 421
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 63/155 (40%), Positives = 99/155 (63%), Gaps = 10/155 (6%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++LK++FSK+GE+ + TLK DP TGRSRGF F++FK++ES++K V+ + H +N K
Sbjct: 177 KDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDK-----VMDQKEHKLNGK 231
Query: 174 KIEAKKAKAKS-----GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNF 228
I+ K+AKA KIFVGGLSP+ +E+I+ +F FG + E+P D ++R+ F
Sbjct: 232 VIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGF 291
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
CFITF+ E V +++ + + ++K A K
Sbjct: 292 CFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSK 326
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 39/48 (81%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
D ++LK++FSK+GE+ + TLK DP TGRSRGF F++FK++ES++K
Sbjct: 173 DTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKV 220
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 49/85 (57%)
Query: 176 EAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEH 235
EA A+ + K+F+GGLS + +++K +F++FG +++ + D + + F F+ F+
Sbjct: 154 EAATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKE 213
Query: 236 ESVVIDLLKNPKQKINDKEVDVKKA 260
V ++ + K+N K +D K+A
Sbjct: 214 SESVDKVMDQKEHKLNGKVIDPKRA 238
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D E+++E+F +GE+E++ L D T + RGF FI FK+ E ++K
Sbjct: 258 DTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 304
>gi|432884676|ref|XP_004074535.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0-like [Oryzias
latipes]
Length = 314
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 61/150 (40%), Positives = 96/150 (64%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++LK++F+K+GE+ + TLK DP TGRSRGF F++FKD ES+EK + + VI+ K
Sbjct: 70 KDLKDYFAKFGEVVDCTLKLDPMTGRSRGFGFVLFKDAESVEKVASQKEHKLNGKVIDPK 129
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
K +A K+K K+FVGGLSP+ +E+++ +F FG + E+P + ++R+ FCFITF
Sbjct: 130 KAKAMKSKEPVKKVFVGGLSPDTPEEKVREYFGAFGEVESIELPMENKTNKRRGFCFITF 189
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ E V +++ I + +VK A K
Sbjct: 190 KEEEAVKKVMEKKYHNIGLSKCEVKVALSK 219
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 40/51 (78%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVE 654
D ++LK++F+K+GE+ + TLK DP TGRSRGF F++FKD ES+EK + +
Sbjct: 66 DTTKKDLKDYFAKFGEVVDCTLKLDPMTGRSRGFGFVLFKDAESVEKVASQ 116
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 50/87 (57%)
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
+I+A K + GK+FVGGLS + +++K +FA+FG +++ + D + + F F+ F
Sbjct: 45 RIDASKNEEDEGKMFVGGLSWDTTKKDLKDYFAKFGEVVDCTLKLDPMTGRSRGFGFVLF 104
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKA 260
+ V + + K+N K +D KKA
Sbjct: 105 KDAESVEKVASQKEHKLNGKVIDPKKA 131
Score = 43.5 bits (101), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 32/47 (68%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D E+++E+F +GE+E++ L + T + RGF FI FK+ E+++K
Sbjct: 151 DTPEEKVREYFGAFGEVESIELPMENKTNKRRGFCFITFKEEEAVKK 197
>gi|426229393|ref|XP_004008775.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B isoform 1
[Ovis aries]
Length = 285
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 66/153 (43%), Positives = 98/153 (64%), Gaps = 9/153 (5%)
Query: 115 ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNKK 174
+LK++F+K+GE+ + T+K DPNTGRSRGF FI+FKD ASVE V+ + H ++ +
Sbjct: 85 DLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDA-----ASVEKVLDQKEHRLDGRV 139
Query: 175 IEAKKAKAKSG----KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCF 230
I+ KKA A KIFVGGL+PE +E+I+ +F +FG I E+P D ++R+ F F
Sbjct: 140 IDPKKAMAMKKDPVKKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKSNKRRGFVF 199
Query: 231 ITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
ITF+ E V +L+ I+ + ++K A PK
Sbjct: 200 ITFKEEEPVKKVLEKKFHTISGSKCEIKVAQPK 232
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 38/47 (80%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D ++LK++F+K+GE+ + T+K DPNTGRSRGF FI+FKD S+EK
Sbjct: 80 DTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEK 126
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 52/87 (59%)
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
+I A K + +GK+FVGGLS + +++K +F +FG +++ + D + + + F FI F
Sbjct: 59 QINASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILF 118
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKA 260
+ + V +L + +++ + +D KKA
Sbjct: 119 KDAASVEKVLDQKEHRLDGRVIDPKKA 145
Score = 47.0 bits (110), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
G+ + TEE ++E+F ++GEIE + L DP + + RGF FI FK+ E ++K
Sbjct: 160 GLNPEATEEKIREYFGEFGEIEAIELPMDPKSNKRRGFVFITFKEEEPVKK 210
>gi|397467431|ref|XP_003805422.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B [Pan
paniscus]
Length = 261
Score = 122 bits (306), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 65/154 (42%), Positives = 99/154 (64%), Gaps = 9/154 (5%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++LK++F+K+GE+ + T+K DPNTGRSRGF FI+FKD ASVE V+ + H ++ +
Sbjct: 13 KDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDA-----ASVEKVLDQKEHRLDGR 67
Query: 174 KIEAKKAKAKSG----KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFC 229
I+ KKA A KIFVGGL+PE +E+I+ +F +FG I E+P D ++R+ F
Sbjct: 68 VIDPKKAMAMKKDPVKKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKLNKRRGFV 127
Query: 230 FITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
FITF+ E V +L+ ++ + ++K A PK
Sbjct: 128 FITFKEEEPVKKVLEKKFHTVSGSKCEIKVAQPK 161
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 38/48 (79%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
D ++LK++F+K+GE+ + T+K DPNTGRSRGF FI+FKD S+EK
Sbjct: 9 DTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKV 56
Score = 46.6 bits (109), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 30/44 (68%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
E+++E+F ++GEIE + L DP + RGF FI FK+ E ++K
Sbjct: 97 EKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKKV 140
Score = 46.2 bits (108), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 44/74 (59%)
Query: 187 IFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNP 246
+FVGGLS + +++K +F +FG +++ + D + + + F FI F+ + V +L
Sbjct: 1 MFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQK 60
Query: 247 KQKINDKEVDVKKA 260
+ +++ + +D KKA
Sbjct: 61 EHRLDGRVIDPKKA 74
>gi|47087353|ref|NP_998557.1| heterogeneous nuclear ribonucleoprotein D-like [Danio rerio]
gi|33416353|gb|AAH55525.1| Heterogeneous nuclear ribonucleoprotein D-like [Danio rerio]
Length = 296
Score = 122 bits (306), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 61/155 (39%), Positives = 100/155 (64%), Gaps = 10/155 (6%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++L ++ S++GE+ + T+K+DP TGRSRGF F++FKD ES+++ V+ H ++ K
Sbjct: 44 KDLTDYLSRFGEVLDCTIKTDPLTGRSRGFGFVLFKDAESVDR-----VLELTEHKLDGK 98
Query: 174 KIEAKKAKAKSGK-----IFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNF 228
I+ K+AKA GK +FVGGLSP++ +E+++ +F +G I E+P D ++R+ F
Sbjct: 99 LIDPKRAKAIKGKEPPKKVFVGGLSPDITEEQLREYFGVYGEIESIELPTDTKTNERRGF 158
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
CF+TF E V LL+N +I + ++K A PK
Sbjct: 159 CFVTFALEEPVQKLLENRYHQIGSGKCEIKVAQPK 193
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 37/48 (77%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
D ++L ++ S++GE+ + T+K+DP TGRSRGF F++FKD ES+++
Sbjct: 40 DTSKKDLTDYLSRFGEVLDCTIKTDPLTGRSRGFGFVLFKDAESVDRV 87
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 49/87 (56%)
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
KI A K + GK+F+GGLS + +++ + ++FG +++ + D + + F F+ F
Sbjct: 19 KINASKNQEDDGKMFIGGLSWDTSKKDLTDYLSRFGEVLDCTIKTDPLTGRSRGFGFVLF 78
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKA 260
+ V +L+ + K++ K +D K+A
Sbjct: 79 KDAESVDRVLELTEHKLDGKLIDPKRA 105
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
G+ ITEE L+E+F YGEIE++ L +D T RGF F+ F E ++K
Sbjct: 121 GLSPDITEEQLREYFGVYGEIESIELPTDTKTNERRGFCFVTFALEEPVQK 171
Score = 43.9 bits (102), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 497
EI E+P D ++R+ FCF+TF E V LL+N +I + ++K A PK
Sbjct: 140 EIESIELPTDTKTNERRGFCFVTFALEEPVQKLLENRYHQIGSGKCEIKVAQPK 193
>gi|383873338|ref|NP_001244741.1| heterogeneous nuclear ribonucleoprotein A/B [Macaca mulatta]
gi|380787211|gb|AFE65481.1| heterogeneous nuclear ribonucleoprotein A/B isoform a [Macaca
mulatta]
gi|383409139|gb|AFH27783.1| heterogeneous nuclear ribonucleoprotein A/B isoform a [Macaca
mulatta]
gi|384940566|gb|AFI33888.1| heterogeneous nuclear ribonucleoprotein A/B isoform a [Macaca
mulatta]
Length = 332
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 66/154 (42%), Positives = 99/154 (64%), Gaps = 9/154 (5%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++LK++F+K+GE+ + T+K DPNTGRSRGF FI+FKD ASVE V+ + H ++ +
Sbjct: 84 KDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDA-----ASVEKVLDQKEHRLDGR 138
Query: 174 KIEAKKAKAKSG----KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFC 229
I+ KKA A KIFVGGL+PE +E+I+ +F +FG I E+P D ++R+ F
Sbjct: 139 VIDPKKAMAMKKDPVKKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKLNKRRGFV 198
Query: 230 FITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
FITF+ E V +L+ I+ + ++K A PK
Sbjct: 199 FITFKEEEPVKKVLEKKFHTISGSKCEIKVAQPK 232
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 38/47 (80%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D ++LK++F+K+GE+ + T+K DPNTGRSRGF FI+FKD S+EK
Sbjct: 80 DTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEK 126
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 52/87 (59%)
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
+I A K + +GK+FVGGLS + +++K +F +FG +++ + D + + + F FI F
Sbjct: 59 QINASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILF 118
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKA 260
+ + V +L + +++ + +D KKA
Sbjct: 119 KDAASVEKVLDQKEHRLDGRVIDPKKA 145
Score = 46.2 bits (108), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
G+ + TEE ++E+F ++GEIE + L DP + RGF FI FK+ E ++K
Sbjct: 160 GLNPEATEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKK 210
>gi|140971918|ref|NP_112620.2| heterogeneous nuclear ribonucleoprotein A/B [Rattus norvegicus]
gi|392351173|ref|XP_003750864.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B-like isoform
1 [Rattus norvegicus]
gi|6911221|gb|AAF31437.1|AF216753_1 CArG-binding factor A [Rattus norvegicus]
gi|6562847|emb|CAB62554.1| heterogeneous nuclear ribonucleoprotein [Rattus norvegicus]
gi|44890256|gb|AAH66664.1| Hnrpab protein [Rattus norvegicus]
gi|149052497|gb|EDM04314.1| rCG34663, isoform CRA_b [Rattus norvegicus]
Length = 285
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 65/154 (42%), Positives = 100/154 (64%), Gaps = 9/154 (5%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++LK++F+K+GE+ + T+K DPNTGRSRGF FI+FKD+ S+EK V+ + H ++ +
Sbjct: 89 KDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDSSSVEK-----VLDQKEHRLDGR 143
Query: 174 KIEAKKAKAKSG----KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFC 229
I+ KKA A KIFVGGL+PE +E+I+ +F QFG I E+P D ++R+ F
Sbjct: 144 VIDPKKAMAMKKDPVKKIFVGGLNPEATEEKIREYFGQFGEIEAIELPIDPKLNKRRGFV 203
Query: 230 FITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
FITF+ E V +L+ ++ + ++K A PK
Sbjct: 204 FITFKEEDPVKKVLEKKFHTVSGSKCEIKVAQPK 237
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 39/47 (82%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D ++LK++F+K+GE+ + T+K DPNTGRSRGF FI+FKD+ S+EK
Sbjct: 85 DTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDSSSVEK 131
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 52/87 (59%)
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
+I A K + +GK+FVGGLS + +++K +F +FG +++ + D + + + F FI F
Sbjct: 64 QINASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILF 123
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKA 260
+ S V +L + +++ + +D KKA
Sbjct: 124 KDSSSVEKVLDQKEHRLDGRVIDPKKA 150
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 10/94 (10%)
Query: 567 LTVSCSHYHYLFDQNLRTHYFYIVEAKNKMVSHPGIVDKI----------TEELKEHFSK 616
L S + DQ +++ K M V KI E+++E+F +
Sbjct: 122 LFKDSSSVEKVLDQKEHRLDGRVIDPKKAMAMKKDPVKKIFVGGLNPEATEEKIREYFGQ 181
Query: 617 YGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+GEIE + L DP + RGF FI FK+ + ++K
Sbjct: 182 FGEIEAIELPIDPKLNKRRGFVFITFKEEDPVKK 215
>gi|403290028|ref|XP_003936135.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B [Saimiri
boliviensis boliviensis]
Length = 260
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 66/154 (42%), Positives = 98/154 (63%), Gaps = 9/154 (5%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++LK++F+K+GE+ + T+K DPNTGRSRGF FI+FKD ASVE V+ + H ++ +
Sbjct: 13 KDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDA-----ASVEKVLDQKEHRLDGR 67
Query: 174 KIEAKKAKAKSG----KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFC 229
I+ KKA A KIFVGGL+PE +E+I+ +F FG I E+P D ++R+ F
Sbjct: 68 VIDPKKAMAMKKDPVKKIFVGGLNPEATEEKIREYFGDFGEIEAIELPMDPKLNKRRGFV 127
Query: 230 FITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
FITF+ E V +L+ I+ + ++K A PK
Sbjct: 128 FITFKEEEPVKKVLEKKFHTISGSKCEIKVAQPK 161
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 38/48 (79%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
D ++LK++F+K+GE+ + T+K DPNTGRSRGF FI+FKD S+EK
Sbjct: 9 DTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKV 56
Score = 46.2 bits (108), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 44/74 (59%)
Query: 187 IFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNP 246
+FVGGLS + +++K +F +FG +++ + D + + + F FI F+ + V +L
Sbjct: 1 MFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQK 60
Query: 247 KQKINDKEVDVKKA 260
+ +++ + +D KKA
Sbjct: 61 EHRLDGRVIDPKKA 74
Score = 45.8 bits (107), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 29/44 (65%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
E+++E+F +GEIE + L DP + RGF FI FK+ E ++K
Sbjct: 97 EKIREYFGDFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKKV 140
>gi|12851175|dbj|BAB28963.1| unnamed protein product [Mus musculus]
gi|148701715|gb|EDL33662.1| heterogeneous nuclear ribonucleoprotein A/B, isoform CRA_b [Mus
musculus]
Length = 276
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 65/153 (42%), Positives = 99/153 (64%), Gaps = 9/153 (5%)
Query: 115 ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNKK 174
+LK++F+K+GE+ + T+K DPNTGRSRGF FI+FKD+ S+EK V+ + H ++ +
Sbjct: 90 DLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDSSSVEK-----VLDQKEHRLDGRV 144
Query: 175 IEAKKAKAKSG----KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCF 230
I+ KKA A KIFVGGL+PE +E+I+ +F QFG I E+P D ++R+ F F
Sbjct: 145 IDPKKAMAMKKDPVKKIFVGGLNPEATEEKIREYFGQFGEIEAIELPIDPKLNKRRGFVF 204
Query: 231 ITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
ITF+ E V +L+ ++ + ++K A PK
Sbjct: 205 ITFKEEDPVKKVLEKKFHTVSGSKCEIKVAQPK 237
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 39/47 (82%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D ++LK++F+K+GE+ + T+K DPNTGRSRGF FI+FKD+ S+EK
Sbjct: 85 DTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDSSSVEK 131
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 52/87 (59%)
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
+I A K + +GK+FVGGLS + +++K +F +FG +++ + D + + + F FI F
Sbjct: 64 QINASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILF 123
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKA 260
+ S V +L + +++ + +D KKA
Sbjct: 124 KDSSSVEKVLDQKEHRLDGRVIDPKKA 150
Score = 45.4 bits (106), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 10/94 (10%)
Query: 567 LTVSCSHYHYLFDQNLRTHYFYIVEAKNKMVSHPGIVDKI----------TEELKEHFSK 616
L S + DQ +++ K M V KI E+++E+F +
Sbjct: 122 LFKDSSSVEKVLDQKEHRLDGRVIDPKKAMAMKKDPVKKIFVGGLNPEATEEKIREYFGQ 181
Query: 617 YGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+GEIE + L DP + RGF FI FK+ + ++K
Sbjct: 182 FGEIEAIELPIDPKLNKRRGFVFITFKEEDPVKK 215
>gi|146260280|ref|NP_001041526.1| heterogeneous nuclear ribonucleoprotein A/B isoform 1 [Mus
musculus]
gi|89275690|gb|ABD66224.1| S1 protein C2 [Mus musculus]
gi|148701714|gb|EDL33661.1| heterogeneous nuclear ribonucleoprotein A/B, isoform CRA_a [Mus
musculus]
Length = 332
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 65/154 (42%), Positives = 100/154 (64%), Gaps = 9/154 (5%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++LK++F+K+GE+ + T+K DPNTGRSRGF FI+FKD+ S+EK V+ + H ++ +
Sbjct: 89 KDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDSSSVEK-----VLDQKEHRLDGR 143
Query: 174 KIEAKKAKAKSG----KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFC 229
I+ KKA A KIFVGGL+PE +E+I+ +F QFG I E+P D ++R+ F
Sbjct: 144 VIDPKKAMAMKKDPVKKIFVGGLNPEATEEKIREYFGQFGEIEAIELPIDPKLNKRRGFV 203
Query: 230 FITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
FITF+ E V +L+ ++ + ++K A PK
Sbjct: 204 FITFKEEDPVKKVLEKKFHTVSGSKCEIKVAQPK 237
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 39/47 (82%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D ++LK++F+K+GE+ + T+K DPNTGRSRGF FI+FKD+ S+EK
Sbjct: 85 DTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDSSSVEK 131
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 52/87 (59%)
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
+I A K + +GK+FVGGLS + +++K +F +FG +++ + D + + + F FI F
Sbjct: 64 QINASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILF 123
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKA 260
+ S V +L + +++ + +D KKA
Sbjct: 124 KDSSSVEKVLDQKEHRLDGRVIDPKKA 150
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 10/94 (10%)
Query: 567 LTVSCSHYHYLFDQNLRTHYFYIVEAKNKMVSHPGIVDKI----------TEELKEHFSK 616
L S + DQ +++ K M V KI E+++E+F +
Sbjct: 122 LFKDSSSVEKVLDQKEHRLDGRVIDPKKAMAMKKDPVKKIFVGGLNPEATEEKIREYFGQ 181
Query: 617 YGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+GEIE + L DP + RGF FI FK+ + ++K
Sbjct: 182 FGEIEAIELPIDPKLNKRRGFVFITFKEEDPVKK 215
>gi|26345118|dbj|BAC36208.1| unnamed protein product [Mus musculus]
Length = 285
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 65/154 (42%), Positives = 100/154 (64%), Gaps = 9/154 (5%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++LK++F+K+GE+ + T+K DPNTGRSRGF FI+FKD+ S+EK V+ + H ++ +
Sbjct: 89 KDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDSSSVEK-----VLDQKEHRLDGR 143
Query: 174 KIEAKKAKAKSG----KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFC 229
I+ KKA A KIFVGGL+PE +E+I+ +F QFG I E+P D ++R+ F
Sbjct: 144 VIDPKKAMAMKKDPVKKIFVGGLNPEATEEKIREYFGQFGEIEAIELPIDPKLNKRRGFV 203
Query: 230 FITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
FITF+ E V +L+ ++ + ++K A PK
Sbjct: 204 FITFKEEDPVKKVLEKKFHTVSGSKCEIKVAQPK 237
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 39/47 (82%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D ++LK++F+K+GE+ + T+K DPNTGRSRGF FI+FKD+ S+EK
Sbjct: 85 DTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDSSSVEK 131
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 52/87 (59%)
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
+I A K + +GK+FVGGLS + +++K +F +FG +++ + D + + + F FI F
Sbjct: 64 QINASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILF 123
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKA 260
+ S V +L + +++ + +D KKA
Sbjct: 124 KDSSSVEKVLDQKEHRLDGRVIDPKKA 150
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 10/94 (10%)
Query: 567 LTVSCSHYHYLFDQNLRTHYFYIVEAKNKMVSHPGIVDKI----------TEELKEHFSK 616
L S + DQ +++ K M V KI E+++E+F +
Sbjct: 122 LFKDSSSVEKVLDQKEHRLDGRVIDPKKAMAMKKDPVKKIFVGGLNPEATEEKIREYFGQ 181
Query: 617 YGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+GEIE + L DP + RGF FI FK+ + ++K
Sbjct: 182 FGEIEAIELPIDPKLNKRRGFVFITFKEEDPVKK 215
>gi|351704017|gb|EHB06936.1| Heterogeneous nuclear ribonucleoprotein A/B, partial
[Heterocephalus glaber]
Length = 261
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 66/154 (42%), Positives = 98/154 (63%), Gaps = 9/154 (5%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++LK++F+K+GE+ + T+K DPNTGRSRGF FI+FKD ASVE V+ + H ++ +
Sbjct: 14 KDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDA-----ASVEKVLDQKEHRLDGR 68
Query: 174 KIEAKKAKAKSG----KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFC 229
I+ KKA A KIFVGGL+PE +E+I+ +F FG I E+P D ++R+ F
Sbjct: 69 VIDPKKAMAMKKDPVKKIFVGGLNPEATEEKIREYFGDFGEIEAIELPMDPKLNKRRGFV 128
Query: 230 FITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
FITF+ E V +L+ I+ + ++K A PK
Sbjct: 129 FITFKEEDPVKKVLEKKFHTISGSKCEIKVAQPK 162
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 38/48 (79%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
D ++LK++F+K+GE+ + T+K DPNTGRSRGF FI+FKD S+EK
Sbjct: 10 DTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKV 57
Score = 47.8 bits (112), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 45/75 (60%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+FVGGLS + +++K +F +FG +++ + D + + + F FI F+ + V +L
Sbjct: 1 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQ 60
Query: 246 PKQKINDKEVDVKKA 260
+ +++ + +D KKA
Sbjct: 61 KEHRLDGRVIDPKKA 75
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 29/44 (65%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
E+++E+F +GEIE + L DP + RGF FI FK+ + ++K
Sbjct: 98 EKIREYFGDFGEIEAIELPMDPKLNKRRGFVFITFKEEDPVKKV 141
>gi|74225210|dbj|BAE38291.1| unnamed protein product [Mus musculus]
Length = 325
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 65/154 (42%), Positives = 100/154 (64%), Gaps = 9/154 (5%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++LK++F+K+GE+ + T+K DPNTGRSRGF FI+FKD+ S+EK V+ + H ++ +
Sbjct: 82 KDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDSSSVEK-----VLDQKEHRLDGR 136
Query: 174 KIEAKKAKAKSG----KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFC 229
I+ KKA A KIFVGGL+PE +E+I+ +F QFG I E+P D ++R+ F
Sbjct: 137 VIDPKKAMAMKKDPVKKIFVGGLNPEATEEKIREYFGQFGEIEAIELPIDPKLNKRRGFV 196
Query: 230 FITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
FITF+ E V +L+ ++ + ++K A PK
Sbjct: 197 FITFKEEDPVKKVLEKKFHTVSGSKCEIKVAQPK 230
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 39/47 (82%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D ++LK++F+K+GE+ + T+K DPNTGRSRGF FI+FKD+ S+EK
Sbjct: 78 DTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDSSSVEK 124
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 52/87 (59%)
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
+I A K + +GK+FVGGLS + +++K +F +FG +++ + D + + + F FI F
Sbjct: 57 QINASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILF 116
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKA 260
+ S V +L + +++ + +D KKA
Sbjct: 117 KDSSSVEKVLDQKEHRLDGRVIDPKKA 143
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 10/94 (10%)
Query: 567 LTVSCSHYHYLFDQNLRTHYFYIVEAKNKMVSHPGIVDKI----------TEELKEHFSK 616
L S + DQ +++ K M V KI E+++E+F +
Sbjct: 115 LFKDSSSVEKVLDQKEHRLDGRVIDPKKAMAMKKDPVKKIFVGGLNPEATEEKIREYFGQ 174
Query: 617 YGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+GEIE + L DP + RGF FI FK+ + ++K
Sbjct: 175 FGEIEAIELPIDPKLNKRRGFVFITFKEEDPVKK 208
>gi|27695334|gb|AAH43069.1| Hnrpab protein [Mus musculus]
Length = 311
Score = 122 bits (305), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 65/153 (42%), Positives = 99/153 (64%), Gaps = 9/153 (5%)
Query: 115 ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNKK 174
+LK++F+K+GE+ + T+K DPNTGRSRGF FI+FKD+ S+EK V+ + H ++ +
Sbjct: 90 DLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDSSSVEK-----VLDQKEHRLDGRV 144
Query: 175 IEAKKAKAKSG----KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCF 230
I+ KKA A KIFVGGL+PE +E+I+ +F QFG I E+P D ++R+ F F
Sbjct: 145 IDPKKAMAMKKDPVKKIFVGGLNPEATEEKIREYFGQFGEIEAIELPIDPKLNKRRGFVF 204
Query: 231 ITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
ITF+ E V +L+ ++ + ++K A PK
Sbjct: 205 ITFKEEDPVKKVLEKKFHTVSGSKCEIKVAQPK 237
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 39/47 (82%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D ++LK++F+K+GE+ + T+K DPNTGRSRGF FI+FKD+ S+EK
Sbjct: 85 DTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDSSSVEK 131
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 52/87 (59%)
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
+I A K + +GK+FVGGLS + +++K +F +FG +++ + D + + + F FI F
Sbjct: 64 QINASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILF 123
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKA 260
+ S V +L + +++ + +D KKA
Sbjct: 124 KDSSSVEKVLDQKEHRLDGRVIDPKKA 150
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 10/94 (10%)
Query: 567 LTVSCSHYHYLFDQNLRTHYFYIVEAKNKMVSHPGIVDKI----------TEELKEHFSK 616
L S + DQ +++ K M V KI E+++E+F +
Sbjct: 122 LFKDSSSVEKVLDQKEHRLDGRVIDPKKAMAMKKDPVKKIFVGGLNPEATEEKIREYFGQ 181
Query: 617 YGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+GEIE + L DP + RGF FI FK+ + ++K
Sbjct: 182 FGEIEAIELPIDPKLNKRRGFVFITFKEEDPVKK 215
>gi|402873600|ref|XP_003900659.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B [Papio
anubis]
Length = 311
Score = 122 bits (305), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 66/153 (43%), Positives = 98/153 (64%), Gaps = 9/153 (5%)
Query: 115 ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNKK 174
+LK++F+K+GE+ + T+K DPNTGRSRGF FI+FKD ASVE V+ + H ++ +
Sbjct: 85 DLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDA-----ASVEKVLDQKEHRLDGRV 139
Query: 175 IEAKKAKAKSG----KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCF 230
I+ KKA A KIFVGGL+PE +E+I+ +F +FG I E+P D ++R+ F F
Sbjct: 140 IDPKKAMAMKKDPVKKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVF 199
Query: 231 ITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
ITF+ E V +L+ I+ + ++K A PK
Sbjct: 200 ITFKEEEPVKKVLEKKFHTISGSKCEIKVAQPK 232
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 38/47 (80%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D ++LK++F+K+GE+ + T+K DPNTGRSRGF FI+FKD S+EK
Sbjct: 80 DTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEK 126
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 52/87 (59%)
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
+I A K + +GK+FVGGLS + +++K +F +FG +++ + D + + + F FI F
Sbjct: 59 QINASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILF 118
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKA 260
+ + V +L + +++ + +D KKA
Sbjct: 119 KDAASVEKVLDQKEHRLDGRVIDPKKA 145
Score = 46.2 bits (108), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 10/94 (10%)
Query: 567 LTVSCSHYHYLFDQNLRTHYFYIVEAKNKMVSHPGIVDKI----------TEELKEHFSK 616
L + + DQ +++ K M V KI E+++E+F +
Sbjct: 117 LFKDAASVEKVLDQKEHRLDGRVIDPKKAMAMKKDPVKKIFVGGLNPEATEEKIREYFGE 176
Query: 617 YGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+GEIE + L DP + RGF FI FK+ E ++K
Sbjct: 177 FGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKK 210
>gi|380786855|gb|AFE65303.1| heterogeneous nuclear ribonucleoprotein A/B isoform b [Macaca
mulatta]
gi|383409141|gb|AFH27784.1| heterogeneous nuclear ribonucleoprotein A/B isoform b [Macaca
mulatta]
gi|384940568|gb|AFI33889.1| heterogeneous nuclear ribonucleoprotein A/B isoform b [Macaca
mulatta]
Length = 285
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 66/153 (43%), Positives = 98/153 (64%), Gaps = 9/153 (5%)
Query: 115 ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNKK 174
+LK++F+K+GE+ + T+K DPNTGRSRGF FI+FKD ASVE V+ + H ++ +
Sbjct: 85 DLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDA-----ASVEKVLDQKEHRLDGRV 139
Query: 175 IEAKKAKAKSG----KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCF 230
I+ KKA A KIFVGGL+PE +E+I+ +F +FG I E+P D ++R+ F F
Sbjct: 140 IDPKKAMAMKKDPVKKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVF 199
Query: 231 ITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
ITF+ E V +L+ I+ + ++K A PK
Sbjct: 200 ITFKEEEPVKKVLEKKFHTISGSKCEIKVAQPK 232
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 38/47 (80%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D ++LK++F+K+GE+ + T+K DPNTGRSRGF FI+FKD S+EK
Sbjct: 80 DTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEK 126
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 52/87 (59%)
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
+I A K + +GK+FVGGLS + +++K +F +FG +++ + D + + + F FI F
Sbjct: 59 QINASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILF 118
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKA 260
+ + V +L + +++ + +D KKA
Sbjct: 119 KDAASVEKVLDQKEHRLDGRVIDPKKA 145
Score = 46.2 bits (108), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
G+ + TEE ++E+F ++GEIE + L DP + RGF FI FK+ E ++K
Sbjct: 160 GLNPEATEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKK 210
>gi|62898411|dbj|BAD97145.1| heterogeneous nuclear ribonucleoprotein AB isoform a variant [Homo
sapiens]
Length = 332
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/154 (42%), Positives = 99/154 (64%), Gaps = 9/154 (5%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++LK++F+K+GE+ + T+K DPNTGRSRGF FI+FKD ASVE V+ + H ++ +
Sbjct: 84 KDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDA-----ASVEKVLDQKEHRLDGR 138
Query: 174 KIEAKKAKAKSG----KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFC 229
I+ KKA A KIFVGGL+PE +E+I+ +F +FG I E+P D ++R+ F
Sbjct: 139 VIDPKKAMAMKKDPVKKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKLNKRRGFV 198
Query: 230 FITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
FITF+ E V +L+ ++ + ++K A PK
Sbjct: 199 FITFKEEEPVKKVLEKKFHTVSGSKCEIKVAQPK 232
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 38/47 (80%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D ++LK++F+K+GE+ + T+K DPNTGRSRGF FI+FKD S+EK
Sbjct: 80 DTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEK 126
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 52/87 (59%)
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
+I A K + +GK+FVGGLS + +++K +F +FG +++ + D + + + F FI F
Sbjct: 59 QINASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILF 118
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKA 260
+ + V +L + +++ + +D KKA
Sbjct: 119 KDAASVEKVLDQKEHRLDGRVIDPKKA 145
Score = 46.2 bits (108), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
G+ + TEE ++E+F ++GEIE + L DP + RGF FI FK+ E ++K
Sbjct: 160 GLNPEATEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKK 210
>gi|410225700|gb|JAA10069.1| heterogeneous nuclear ribonucleoprotein A/B [Pan troglodytes]
gi|410260870|gb|JAA18401.1| heterogeneous nuclear ribonucleoprotein A/B [Pan troglodytes]
gi|410299218|gb|JAA28209.1| heterogeneous nuclear ribonucleoprotein A/B [Pan troglodytes]
Length = 332
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/154 (42%), Positives = 99/154 (64%), Gaps = 9/154 (5%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++LK++F+K+GE+ + T+K DPNTGRSRGF FI+FKD ASVE V+ + H ++ +
Sbjct: 84 KDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDA-----ASVEKVLDQKEHRLDGR 138
Query: 174 KIEAKKAKAKSG----KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFC 229
I+ KKA A KIFVGGL+PE +E+I+ +F +FG I E+P D ++R+ F
Sbjct: 139 VIDPKKAMAMKKDPVKKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKLNKRRGFV 198
Query: 230 FITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
FITF+ E V +L+ ++ + ++K A PK
Sbjct: 199 FITFKEEEPVKKVLEKKFHTVSGSKCEIKVAQPK 232
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 38/47 (80%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D ++LK++F+K+GE+ + T+K DPNTGRSRGF FI+FKD S+EK
Sbjct: 80 DTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEK 126
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 52/87 (59%)
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
+I A K + +GK+FVGGLS + +++K +F +FG +++ + D + + + F FI F
Sbjct: 59 QINASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILF 118
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKA 260
+ + V +L + +++ + +D KKA
Sbjct: 119 KDAASVEKVLDQKEHRLDGRVIDPKKA 145
Score = 46.2 bits (108), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
G+ + TEE ++E+F ++GEIE + L DP + RGF FI FK+ E ++K
Sbjct: 160 GLNPEATEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKK 210
>gi|55956919|ref|NP_112556.2| heterogeneous nuclear ribonucleoprotein A/B isoform a [Homo
sapiens]
gi|426351244|ref|XP_004043165.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B isoform 1
[Gorilla gorilla gorilla]
gi|21757498|dbj|BAC05134.1| unnamed protein product [Homo sapiens]
gi|33874222|gb|AAH36708.1| Heterogeneous nuclear ribonucleoprotein A/B [Homo sapiens]
gi|119574227|gb|EAW53842.1| heterogeneous nuclear ribonucleoprotein A/B, isoform CRA_a [Homo
sapiens]
Length = 332
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/154 (42%), Positives = 99/154 (64%), Gaps = 9/154 (5%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++LK++F+K+GE+ + T+K DPNTGRSRGF FI+FKD ASVE V+ + H ++ +
Sbjct: 84 KDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDA-----ASVEKVLDQKEHRLDGR 138
Query: 174 KIEAKKAKAKSG----KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFC 229
I+ KKA A KIFVGGL+PE +E+I+ +F +FG I E+P D ++R+ F
Sbjct: 139 VIDPKKAMAMKKDPVKKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKLNKRRGFV 198
Query: 230 FITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
FITF+ E V +L+ ++ + ++K A PK
Sbjct: 199 FITFKEEEPVKKVLEKKFHTVSGSKCEIKVAQPK 232
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 38/47 (80%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D ++LK++F+K+GE+ + T+K DPNTGRSRGF FI+FKD S+EK
Sbjct: 80 DTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEK 126
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 52/87 (59%)
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
+I A K + +GK+FVGGLS + +++K +F +FG +++ + D + + + F FI F
Sbjct: 59 QINASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILF 118
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKA 260
+ + V +L + +++ + +D KKA
Sbjct: 119 KDAASVEKVLDQKEHRLDGRVIDPKKA 145
Score = 46.2 bits (108), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
G+ + TEE ++E+F ++GEIE + L DP + RGF FI FK+ E ++K
Sbjct: 160 GLNPEATEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKK 210
>gi|6754222|ref|NP_034578.1| heterogeneous nuclear ribonucleoprotein A/B isoform 2 [Mus
musculus]
gi|729000|sp|Q99020.1|ROAA_MOUSE RecName: Full=Heterogeneous nuclear ribonucleoprotein A/B;
Short=hnRNP A/B; AltName: Full=CArG-binding factor-A;
Short=CBF-A
gi|220363|dbj|BAA14181.1| CArG-binding factor-A [Mus musculus]
gi|840648|gb|AAA92146.1| CArG box-binding factor [Mus musculus]
gi|12850708|dbj|BAB28821.1| unnamed protein product [Mus musculus]
gi|89275692|gb|ABD66225.1| S1 protein D2 [Mus musculus]
gi|148701716|gb|EDL33663.1| heterogeneous nuclear ribonucleoprotein A/B, isoform CRA_c [Mus
musculus]
Length = 285
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/154 (42%), Positives = 100/154 (64%), Gaps = 9/154 (5%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++LK++F+K+GE+ + T+K DPNTGRSRGF FI+FKD+ S+EK V+ + H ++ +
Sbjct: 89 KDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDSSSVEK-----VLDQKEHRLDGR 143
Query: 174 KIEAKKAKAKSG----KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFC 229
I+ KKA A KIFVGGL+PE +E+I+ +F QFG I E+P D ++R+ F
Sbjct: 144 VIDPKKAMAMKKDPVKKIFVGGLNPEATEEKIREYFGQFGEIEAIELPIDPKLNKRRGFV 203
Query: 230 FITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
FITF+ E V +L+ ++ + ++K A PK
Sbjct: 204 FITFKEEDPVKKVLEKKFHTVSGSKCEIKVAQPK 237
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 39/47 (82%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D ++LK++F+K+GE+ + T+K DPNTGRSRGF FI+FKD+ S+EK
Sbjct: 85 DTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDSSSVEK 131
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 52/87 (59%)
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
+I A K + +GK+FVGGLS + +++K +F +FG +++ + D + + + F FI F
Sbjct: 64 QINASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILF 123
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKA 260
+ S V +L + +++ + +D KKA
Sbjct: 124 KDSSSVEKVLDQKEHRLDGRVIDPKKA 150
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 10/94 (10%)
Query: 567 LTVSCSHYHYLFDQNLRTHYFYIVEAKNKMVSHPGIVDKI----------TEELKEHFSK 616
L S + DQ +++ K M V KI E+++E+F +
Sbjct: 122 LFKDSSSVEKVLDQKEHRLDGRVIDPKKAMAMKKDPVKKIFVGGLNPEATEEKIREYFGQ 181
Query: 617 YGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+GEIE + L DP + RGF FI FK+ + ++K
Sbjct: 182 FGEIEAIELPIDPKLNKRRGFVFITFKEEDPVKK 215
>gi|194387362|dbj|BAG60045.1| unnamed protein product [Homo sapiens]
Length = 323
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/154 (42%), Positives = 99/154 (64%), Gaps = 9/154 (5%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++LK++F+K+GE+ + T+K DPNTGRSRGF FI+FKD ASVE V+ + H ++ +
Sbjct: 75 KDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDA-----ASVEKVLDQKEHRLDGR 129
Query: 174 KIEAKKAKAKSG----KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFC 229
I+ KKA A KIFVGGL+PE +E+I+ +F +FG I E+P D ++R+ F
Sbjct: 130 VIDPKKAMAMKKDPVKKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKLNKRRGFV 189
Query: 230 FITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
FITF+ E V +L+ ++ + ++K A PK
Sbjct: 190 FITFKEEEPVKKVLEKKFHTVSGSKCEIKVAQPK 223
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 38/47 (80%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D ++LK++F+K+GE+ + T+K DPNTGRSRGF FI+FKD S+EK
Sbjct: 71 DTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEK 117
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 52/87 (59%)
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
+I A K + +GK+FVGGLS + +++K +F +FG +++ + D + + + F FI F
Sbjct: 50 QINASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILF 109
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKA 260
+ + V +L + +++ + +D KKA
Sbjct: 110 KDAASVEKVLDQKEHRLDGRVIDPKKA 136
Score = 46.2 bits (108), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
G+ + TEE ++E+F ++GEIE + L DP + RGF FI FK+ E ++K
Sbjct: 151 GLNPEATEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKK 201
>gi|301753349|ref|XP_002912535.1| PREDICTED: hypothetical protein LOC100472152 [Ailuropoda
melanoleuca]
Length = 642
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 63/155 (40%), Positives = 99/155 (63%), Gaps = 10/155 (6%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++LK++FSK+GE+ + TLK DP TGRSRGF F++FK++ES++K V+ + H +N K
Sbjct: 398 KDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDK-----VMDQKEHKLNGK 452
Query: 174 KIEAKKAKAKS-----GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNF 228
I+ K+AKA KIFVGGLSP+ +E+I+ +F FG + E+P D ++R+ F
Sbjct: 453 VIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGF 512
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
CFITF+ E V +++ + + ++K A K
Sbjct: 513 CFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSK 547
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 39/47 (82%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D ++LK++FSK+GE+ + TLK DP TGRSRGF F++FK++ES++K
Sbjct: 394 DTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDK 440
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 54/96 (56%)
Query: 165 EGNHVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQ 224
EG+ + + EA A+ + K+F+GGLS + +++K +F++FG +++ + D +
Sbjct: 364 EGHSNSSPRHSEAATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGR 423
Query: 225 RKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKA 260
+ F F+ F+ V ++ + K+N K +D K+A
Sbjct: 424 SRGFGFVLFKESESVDKVMDQKEHKLNGKVIDPKRA 459
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D E+++E+F +GE+E++ L D T + RGF FI FK+ E ++K
Sbjct: 479 DTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 525
>gi|354472673|ref|XP_003498562.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B-like
[Cricetulus griseus]
Length = 243
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/154 (41%), Positives = 100/154 (64%), Gaps = 9/154 (5%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++LK++F+K+GE+ + T+K DPNTGRSRGF FI+FKD+ +SVE V+ + H ++ +
Sbjct: 17 KDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDS-----SSVEKVLDQKEHRLDGR 71
Query: 174 KIEAKKAKAKSG----KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFC 229
I+ KKA A KIFVGGL+PE +E+I+ +F QFG I E+P D ++R+ F
Sbjct: 72 VIDPKKAMAMKKDPVKKIFVGGLNPEATEEKIREYFGQFGEIEAIELPIDPKLNKRRGFV 131
Query: 230 FITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
FIT++ E V +L+ ++ + ++K A PK
Sbjct: 132 FITYKEEDPVKKVLEKKFHTVSGSKCEIKVAQPK 165
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 39/48 (81%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
D ++LK++F+K+GE+ + T+K DPNTGRSRGF FI+FKD+ S+EK
Sbjct: 13 DTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDSSSVEKV 60
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 45/75 (60%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+FVGGLS + +++K +F +FG +++ + D + + + F FI F+ S V +L
Sbjct: 4 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDSSSVEKVLDQ 63
Query: 246 PKQKINDKEVDVKKA 260
+ +++ + +D KKA
Sbjct: 64 KEHRLDGRVIDPKKA 78
Score = 43.9 bits (102), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 30/44 (68%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
E+++E+F ++GEIE + L DP + RGF FI +K+ + ++K
Sbjct: 101 EKIREYFGQFGEIEAIELPIDPKLNKRRGFVFITYKEEDPVKKV 144
>gi|294610680|ref|NP_083246.1| RNA binding motif 31, Y-linked [Mus musculus]
gi|377834528|ref|XP_003689488.1| PREDICTED: uncharacterized protein LOC100861987 [Mus musculus]
gi|377836568|ref|XP_003689057.1| PREDICTED: uncharacterized protein LOC100861987 [Mus musculus]
gi|12856118|dbj|BAB30571.1| unnamed protein product [Mus musculus]
gi|148686366|gb|EDL18313.1| mCG53108 [Mus musculus]
Length = 565
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/184 (38%), Positives = 106/184 (57%), Gaps = 15/184 (8%)
Query: 93 FYIMEAKNKMVSHPGIVHKITEELK-----EHFSKYGEIENVTLKSDPNTGRSRGFAFIV 147
F I KN+ + + +++E+ E+ SK+GEI + +K+DPNTG SRGF F++
Sbjct: 21 FKIDATKNQQDASKMFIGGLSQEMSKQVLLEYLSKFGEIIDFIIKTDPNTGLSRGFGFVL 80
Query: 148 FKDTESLEKASVEDVIAEGNHVINNKKIEAKKAKA-----KSGKIFVGGLSPEMKDEEIK 202
FKD+ A+VE V+ +H ++ KKIE K+AKA + KIFVGGL+P + +E+I+
Sbjct: 81 FKDS-----ATVEKVLQVKDHKVDGKKIEFKRAKALESQFPNKKIFVGGLNPRLSEEKIR 135
Query: 203 AHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATP 262
A+F FG I E+P +R+ F FI + E+ V +L+N I +VK A P
Sbjct: 136 AYFGTFGQIEAIELPLCSDTRERRAFGFIKYMDENSVRKVLENRYHFIGSSRCEVKMAYP 195
Query: 263 KPEP 266
K P
Sbjct: 196 KENP 199
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 44/69 (63%), Gaps = 5/69 (7%)
Query: 587 FYIVEAKNKMVSHPGIVDKITEELK-----EHFSKYGEIENVTLKSDPNTGRSRGFAFIV 641
F I KN+ + + +++E+ E+ SK+GEI + +K+DPNTG SRGF F++
Sbjct: 21 FKIDATKNQQDASKMFIGGLSQEMSKQVLLEYLSKFGEIIDFIIKTDPNTGLSRGFGFVL 80
Query: 642 FKDTESLEK 650
FKD+ ++EK
Sbjct: 81 FKDSATVEK 89
>gi|395861189|ref|XP_003802876.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B [Otolemur
garnettii]
Length = 332
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/154 (42%), Positives = 98/154 (63%), Gaps = 9/154 (5%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++LK++F+K+GE+ + T+K DPNTGRSRGF FI+FKD ASVE V+ + H ++ +
Sbjct: 84 KDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDA-----ASVEKVLDQKEHRLDGR 138
Query: 174 KIEAKKAKAKSG----KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFC 229
I+ KKA A KIFVGGL+PE +E+I+ +F FG I E+P D ++R+ F
Sbjct: 139 VIDPKKAMAMKKDPVKKIFVGGLNPEATEEKIREYFGDFGEIEAIELPMDPKLNKRRGFV 198
Query: 230 FITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
FITF+ E V +L+ I+ + ++K A PK
Sbjct: 199 FITFKEEEPVKKVLEKKFHTISGSKCEIKVAQPK 232
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 38/47 (80%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D ++LK++F+K+GE+ + T+K DPNTGRSRGF FI+FKD S+EK
Sbjct: 80 DTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEK 126
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 52/87 (59%)
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
+I A K + +GK+FVGGLS + +++K +F +FG +++ + D + + + F FI F
Sbjct: 59 QINASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILF 118
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKA 260
+ + V +L + +++ + +D KKA
Sbjct: 119 KDAASVEKVLDQKEHRLDGRVIDPKKA 145
Score = 45.8 bits (107), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
G+ + TEE ++E+F +GEIE + L DP + RGF FI FK+ E ++K
Sbjct: 160 GLNPEATEEKIREYFGDFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKK 210
>gi|55956921|ref|NP_004490.2| heterogeneous nuclear ribonucleoprotein A/B isoform b [Homo
sapiens]
gi|426351246|ref|XP_004043166.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B isoform 2
[Gorilla gorilla gorilla]
gi|12803583|gb|AAH02625.1| Heterogeneous nuclear ribonucleoprotein A/B [Homo sapiens]
gi|13528732|gb|AAH04561.1| Heterogeneous nuclear ribonucleoprotein A/B [Homo sapiens]
gi|13905354|gb|AAH01616.1| Heterogeneous nuclear ribonucleoprotein A/B [Homo sapiens]
gi|14424683|gb|AAH09359.1| Heterogeneous nuclear ribonucleoprotein A/B [Homo sapiens]
gi|119574228|gb|EAW53843.1| heterogeneous nuclear ribonucleoprotein A/B, isoform CRA_b [Homo
sapiens]
gi|119574229|gb|EAW53844.1| heterogeneous nuclear ribonucleoprotein A/B, isoform CRA_b [Homo
sapiens]
gi|119574230|gb|EAW53845.1| heterogeneous nuclear ribonucleoprotein A/B, isoform CRA_b [Homo
sapiens]
gi|193786114|dbj|BAG51397.1| unnamed protein product [Homo sapiens]
gi|208966452|dbj|BAG73240.1| heterogeneous nuclear ribonucleoprotein A/B [synthetic construct]
Length = 285
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/153 (42%), Positives = 98/153 (64%), Gaps = 9/153 (5%)
Query: 115 ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNKK 174
+LK++F+K+GE+ + T+K DPNTGRSRGF FI+FKD ASVE V+ + H ++ +
Sbjct: 85 DLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDA-----ASVEKVLDQKEHRLDGRV 139
Query: 175 IEAKKAKAKSG----KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCF 230
I+ KKA A KIFVGGL+PE +E+I+ +F +FG I E+P D ++R+ F F
Sbjct: 140 IDPKKAMAMKKDPVKKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVF 199
Query: 231 ITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
ITF+ E V +L+ ++ + ++K A PK
Sbjct: 200 ITFKEEEPVKKVLEKKFHTVSGSKCEIKVAQPK 232
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 38/47 (80%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D ++LK++F+K+GE+ + T+K DPNTGRSRGF FI+FKD S+EK
Sbjct: 80 DTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEK 126
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 52/87 (59%)
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
+I A K + +GK+FVGGLS + +++K +F +FG +++ + D + + + F FI F
Sbjct: 59 QINASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILF 118
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKA 260
+ + V +L + +++ + +D KKA
Sbjct: 119 KDAASVEKVLDQKEHRLDGRVIDPKKA 145
Score = 46.2 bits (108), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
G+ + TEE ++E+F ++GEIE + L DP + RGF FI FK+ E ++K
Sbjct: 160 GLNPEATEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKK 210
>gi|410225698|gb|JAA10068.1| heterogeneous nuclear ribonucleoprotein A/B [Pan troglodytes]
gi|410260868|gb|JAA18400.1| heterogeneous nuclear ribonucleoprotein A/B [Pan troglodytes]
gi|410299216|gb|JAA28208.1| heterogeneous nuclear ribonucleoprotein A/B [Pan troglodytes]
Length = 285
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/153 (42%), Positives = 98/153 (64%), Gaps = 9/153 (5%)
Query: 115 ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNKK 174
+LK++F+K+GE+ + T+K DPNTGRSRGF FI+FKD ASVE V+ + H ++ +
Sbjct: 85 DLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDA-----ASVEKVLDQKEHRLDGRV 139
Query: 175 IEAKKAKAKSG----KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCF 230
I+ KKA A KIFVGGL+PE +E+I+ +F +FG I E+P D ++R+ F F
Sbjct: 140 IDPKKAMAMKKDPVKKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVF 199
Query: 231 ITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
ITF+ E V +L+ ++ + ++K A PK
Sbjct: 200 ITFKEEEPVKKVLEKKFHTVSGSKCEIKVAQPK 232
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 38/47 (80%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D ++LK++F+K+GE+ + T+K DPNTGRSRGF FI+FKD S+EK
Sbjct: 80 DTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEK 126
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 52/87 (59%)
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
+I A K + +GK+FVGGLS + +++K +F +FG +++ + D + + + F FI F
Sbjct: 59 QINASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILF 118
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKA 260
+ + V +L + +++ + +D KKA
Sbjct: 119 KDAASVEKVLDQKEHRLDGRVIDPKKA 145
Score = 46.2 bits (108), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
G+ + TEE ++E+F ++GEIE + L DP + RGF FI FK+ E ++K
Sbjct: 160 GLNPEATEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKK 210
>gi|344246933|gb|EGW03037.1| Heterogeneous nuclear ribonucleoprotein A/B [Cricetulus griseus]
Length = 211
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/154 (41%), Positives = 100/154 (64%), Gaps = 9/154 (5%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++LK++F+K+GE+ + T+K DPNTGRSRGF FI+FKD+ +SVE V+ + H ++ +
Sbjct: 13 KDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDS-----SSVEKVLDQKEHRLDGR 67
Query: 174 KIEAKKAKAKSG----KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFC 229
I+ KKA A KIFVGGL+PE +E+I+ +F QFG I E+P D ++R+ F
Sbjct: 68 VIDPKKAMAMKKDPVKKIFVGGLNPEATEEKIREYFGQFGEIEAIELPIDPKLNKRRGFV 127
Query: 230 FITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
FIT++ E V +L+ ++ + ++K A PK
Sbjct: 128 FITYKEEDPVKKVLEKKFHTVSGSKCEIKVAQPK 161
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 39/48 (81%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
D ++LK++F+K+GE+ + T+K DPNTGRSRGF FI+FKD+ S+EK
Sbjct: 9 DTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDSSSVEKV 56
Score = 46.6 bits (109), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 44/74 (59%)
Query: 187 IFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNP 246
+FVGGLS + +++K +F +FG +++ + D + + + F FI F+ S V +L
Sbjct: 1 MFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDSSSVEKVLDQK 60
Query: 247 KQKINDKEVDVKKA 260
+ +++ + +D KKA
Sbjct: 61 EHRLDGRVIDPKKA 74
Score = 43.9 bits (102), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 30/44 (68%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
E+++E+F ++GEIE + L DP + RGF FI +K+ + ++K
Sbjct: 97 EKIREYFGQFGEIEAIELPIDPKLNKRRGFVFITYKEEDPVKKV 140
>gi|345311474|ref|XP_001513207.2| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B-like
[Ornithorhynchus anatinus]
Length = 480
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 63/154 (40%), Positives = 99/154 (64%), Gaps = 9/154 (5%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++LK++F+K+GE+ + T+K DPNTGRSRGF FI+FK E ASV+ V+ + H ++ +
Sbjct: 226 KDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFK-----EAASVDKVLDQKEHRLDGR 280
Query: 174 KIEAKKAKAKSG----KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFC 229
I+ KKA A KIFVGGL+PE +++I+ +F +FG I E+P D ++R+ F
Sbjct: 281 VIDPKKAMAMKKDPVKKIFVGGLNPEATEDKIRDYFGEFGEIEAIELPMDPKTNKRRGFV 340
Query: 230 FITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
FITF+ E V +L+ ++ + ++K A PK
Sbjct: 341 FITFKEEEPVKKILEKKFHNVSGSKCEIKVAQPK 374
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 38/47 (80%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D ++LK++F+K+GE+ + T+K DPNTGRSRGF FI+FK+ S++K
Sbjct: 222 DTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKEAASVDK 268
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 45/75 (60%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+FVGGLS + +++K +F +FG +++ + D + + + F FI F+ + V +L
Sbjct: 213 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKEAASVDKVLDQ 272
Query: 246 PKQKINDKEVDVKKA 260
+ +++ + +D KKA
Sbjct: 273 KEHRLDGRVIDPKKA 287
Score = 46.6 bits (109), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
G+ + TE+ ++++F ++GEIE + L DP T + RGF FI FK+ E ++K
Sbjct: 302 GLNPEATEDKIRDYFGEFGEIEAIELPMDPKTNKRRGFVFITFKEEEPVKK 352
>gi|327265526|ref|XP_003217559.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B-like [Anolis
carolinensis]
Length = 367
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/154 (41%), Positives = 99/154 (64%), Gaps = 9/154 (5%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++LK++F+K+GE+ + T+K DPNTGRSRGF FI+FK E ASV+ V+ + H ++ +
Sbjct: 126 KDLKDYFTKFGEVTDCTIKMDPNTGRSRGFGFILFK-----EAASVDKVLEQKEHKLDGR 180
Query: 174 KIEAKKAKAKSG----KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFC 229
I+ KKA A KIFVGGL+PE +E+I+ +F +FG I E+P D ++R+ F
Sbjct: 181 VIDPKKAMAMKKDPVKKIFVGGLNPEAAEEKIREYFGEFGEIEAIELPMDPKTNKRRGFV 240
Query: 230 FITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
FITF+ E V +L+ ++ + ++K A PK
Sbjct: 241 FITFKEEDPVKKILEKKFHNVSGSKCEIKVAQPK 274
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 38/47 (80%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D ++LK++F+K+GE+ + T+K DPNTGRSRGF FI+FK+ S++K
Sbjct: 122 DTSKKDLKDYFTKFGEVTDCTIKMDPNTGRSRGFGFILFKEAASVDK 168
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 52/87 (59%)
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
+I A K + +GK+FVGGLS + +++K +F +FG + + + D + + + F FI F
Sbjct: 101 QINASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVTDCTIKMDPNTGRSRGFGFILF 160
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKA 260
+ + V +L+ + K++ + +D KKA
Sbjct: 161 KEAASVDKVLEQKEHKLDGRVIDPKKA 187
Score = 47.4 bits (111), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 31/43 (72%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
E+++E+F ++GEIE + L DP T + RGF FI FK+ + ++K
Sbjct: 210 EKIREYFGEFGEIEAIELPMDPKTNKRRGFVFITFKEEDPVKK 252
>gi|213511366|ref|NP_001133116.1| heterogeneous nuclear ribonucleoprotein D-like [Salmo salar]
gi|197631983|gb|ACH70715.1| heterogeneous nuclear ribonucleoprotein D-like [Salmo salar]
gi|221221618|gb|ACM09470.1| Heterogeneous nuclear ribonucleoprotein D-like [Salmo salar]
Length = 283
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 60/154 (38%), Positives = 99/154 (64%), Gaps = 10/154 (6%)
Query: 115 ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNKK 174
+L ++ SK+GE+ + T+K+D TGRSRGF F++F+D+ES+++ V+ H ++ K
Sbjct: 45 DLTDYLSKFGEVLDCTIKTDLMTGRSRGFGFVLFRDSESVDR-----VLELKEHKLDGKL 99
Query: 175 IEAKKAKAKSGK-----IFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFC 229
I+ K+AKA GK +FVGGLSP+ +EEI+ +F FG+I E+P D ++R+ FC
Sbjct: 100 IDPKRAKAMKGKEPPKKVFVGGLSPDTPEEEIREYFGAFGDIDSIELPMDTKTNERRGFC 159
Query: 230 FITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
F+T+ E+ V LL+ ++ + ++K A PK
Sbjct: 160 FVTYCEETPVQKLLECRYHQVGSGKCEIKVAQPK 193
Score = 52.4 bits (124), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 36/48 (75%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
D +L ++ SK+GE+ + T+K+D TGRSRGF F++F+D+ES+++
Sbjct: 40 DTSKTDLTDYLSKFGEVLDCTIKTDLMTGRSRGFGFVLFRDSESVDRV 87
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 47/87 (54%)
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
KI A K + GK+F+GGLS + ++ + ++FG +++ + D + + F F+ F
Sbjct: 19 KINASKNQQDDGKMFIGGLSWDTSKTDLTDYLSKFGEVLDCTIKTDLMTGRSRGFGFVLF 78
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKA 260
V +L+ + K++ K +D K+A
Sbjct: 79 RDSESVDRVLELKEHKLDGKLIDPKRA 105
Score = 42.4 bits (98), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 38/70 (54%), Gaps = 5/70 (7%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
EE++E+F +G+I+++ L D T RGF F+ + E+ V+ ++ H + +
Sbjct: 129 EEIREYFGAFGDIDSIELPMDTKTNERRGFCFVTY-----CEETPVQKLLECRYHQVGSG 183
Query: 174 KIEAKKAKAK 183
K E K A+ K
Sbjct: 184 KCEIKVAQPK 193
Score = 39.7 bits (91), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 31/54 (57%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 497
+I E+P D ++R+ FCF+T+ E+ V LL+ ++ + ++K A PK
Sbjct: 140 DIDSIELPMDTKTNERRGFCFVTYCEETPVQKLLECRYHQVGSGKCEIKVAQPK 193
>gi|223648642|gb|ACN11079.1| Heterogeneous nuclear ribonucleoprotein D-like [Salmo salar]
Length = 301
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 60/154 (38%), Positives = 99/154 (64%), Gaps = 10/154 (6%)
Query: 115 ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNKK 174
+L ++ SK+GE+ + T+K+D TGRSRGF F++F+D+ES+++ V+ H ++ K
Sbjct: 45 DLTDYLSKFGEVLDCTIKTDLMTGRSRGFGFVLFRDSESVDR-----VLELKEHKLDGKL 99
Query: 175 IEAKKAKAKSGK-----IFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFC 229
I+ K+AKA GK +FVGGLSP+ +EEI+ +F FG+I E+P D ++R+ FC
Sbjct: 100 IDPKRAKAMKGKEPPKKVFVGGLSPDTPEEEIREYFGAFGDIDSIELPMDTKTNERRGFC 159
Query: 230 FITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
F+T+ E+ V LL+ ++ + ++K A PK
Sbjct: 160 FVTYCEETPVQKLLECRYHQVGSGKCEIKVAQPK 193
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 36/48 (75%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
D +L ++ SK+GE+ + T+K+D TGRSRGF F++F+D+ES+++
Sbjct: 40 DTSKTDLTDYLSKFGEVLDCTIKTDLMTGRSRGFGFVLFRDSESVDRV 87
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 47/87 (54%)
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
KI A K + GK+F+GGLS + ++ + ++FG +++ + D + + F F+ F
Sbjct: 19 KINASKNQQDDGKMFIGGLSWDTSKTDLTDYLSKFGEVLDCTIKTDLMTGRSRGFGFVLF 78
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKA 260
V +L+ + K++ K +D K+A
Sbjct: 79 RDSESVDRVLELKEHKLDGKLIDPKRA 105
Score = 42.0 bits (97), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 38/70 (54%), Gaps = 5/70 (7%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
EE++E+F +G+I+++ L D T RGF F+ + E+ V+ ++ H + +
Sbjct: 129 EEIREYFGAFGDIDSIELPMDTKTNERRGFCFVTY-----CEETPVQKLLECRYHQVGSG 183
Query: 174 KIEAKKAKAK 183
K E K A+ K
Sbjct: 184 KCEIKVAQPK 193
Score = 39.7 bits (91), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 31/54 (57%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 497
+I E+P D ++R+ FCF+T+ E+ V LL+ ++ + ++K A PK
Sbjct: 140 DIDSIELPMDTKTNERRGFCFVTYCEETPVQKLLECRYHQVGSGKCEIKVAQPK 193
>gi|94966849|ref|NP_001035612.1| heterogeneous nuclear ribonucleoprotein A/B [Bos taurus]
gi|73587357|gb|AAI02924.1| Heterogeneous nuclear ribonucleoprotein A/B [Bos taurus]
gi|296485515|tpg|DAA27630.1| TPA: heterogeneous nuclear ribonucleoprotein A/B [Bos taurus]
Length = 285
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/153 (42%), Positives = 98/153 (64%), Gaps = 9/153 (5%)
Query: 115 ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNKK 174
+LK++F+K+GE+ + T+K DPNTGRSRGF FI+FKD S+EK V+ + H ++ +
Sbjct: 85 DLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDATSVEK-----VLDQKEHRLDGRV 139
Query: 175 IEAKKAKAKSG----KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCF 230
I+ KKA A KIFVGGL+PE +E+I+ +F +FG I E+P D ++R+ F F
Sbjct: 140 IDPKKAMAMKKDPVKKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKSNKRRGFVF 199
Query: 231 ITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
ITF+ E V +L+ I+ + ++K A PK
Sbjct: 200 ITFKEEEPVKKVLEKKFHTISGSKCEIKVAQPK 232
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 38/47 (80%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D ++LK++F+K+GE+ + T+K DPNTGRSRGF FI+FKD S+EK
Sbjct: 80 DTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDATSVEK 126
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 52/87 (59%)
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
+I A K + +GK+FVGGLS + +++K +F +FG +++ + D + + + F FI F
Sbjct: 59 QINASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILF 118
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKA 260
+ + V +L + +++ + +D KKA
Sbjct: 119 KDATSVEKVLDQKEHRLDGRVIDPKKA 145
Score = 47.0 bits (110), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
G+ + TEE ++E+F ++GEIE + L DP + + RGF FI FK+ E ++K
Sbjct: 160 GLNPEATEEKIREYFGEFGEIEAIELPMDPKSNKRRGFVFITFKEEEPVKK 210
>gi|326928651|ref|XP_003210489.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B-like
[Meleagris gallopavo]
gi|449474690|ref|XP_004175898.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B [Taeniopygia
guttata]
gi|449474694|ref|XP_002196057.2| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B [Taeniopygia
guttata]
Length = 262
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/154 (41%), Positives = 98/154 (63%), Gaps = 9/154 (5%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++LK++F+K+GE+ + T+K DPNTGRSRGF FI+FK E SVE V+ + H ++ +
Sbjct: 13 KDLKDYFTKFGEVTDCTIKMDPNTGRSRGFGFILFK-----EPGSVEKVLEQKEHRLDGR 67
Query: 174 KIEAKKAKAKSG----KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFC 229
I+ KKA A KIFVGGL+PE +E+I+ +F +FG I E+P D ++R+ F
Sbjct: 68 LIDPKKAMAMKKDPVKKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKTNKRRGFV 127
Query: 230 FITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
FITF+ E V +L+ ++ + ++K A PK
Sbjct: 128 FITFKEEDPVKKVLEKKFHNVSGSKCEIKVAQPK 161
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 38/48 (79%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
D ++LK++F+K+GE+ + T+K DPNTGRSRGF FI+FK+ S+EK
Sbjct: 9 DTSKKDLKDYFTKFGEVTDCTIKMDPNTGRSRGFGFILFKEPGSVEKV 56
Score = 47.4 bits (111), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 31/44 (70%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
E+++E+F ++GEIE + L DP T + RGF FI FK+ + ++K
Sbjct: 97 EKIREYFGEFGEIEAIELPMDPKTNKRRGFVFITFKEEDPVKKV 140
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 43/74 (58%)
Query: 187 IFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNP 246
+FVGGLS + +++K +F +FG + + + D + + + F FI F+ V +L+
Sbjct: 1 MFVGGLSWDTSKKDLKDYFTKFGEVTDCTIKMDPNTGRSRGFGFILFKEPGSVEKVLEQK 60
Query: 247 KQKINDKEVDVKKA 260
+ +++ + +D KKA
Sbjct: 61 EHRLDGRLIDPKKA 74
>gi|344265339|ref|XP_003404742.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein A/B-like [Loxodonta africana]
Length = 332
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/154 (40%), Positives = 99/154 (64%), Gaps = 9/154 (5%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++LK++F+K+GE+ + T+K DPNTGRSRGF FI+FKD S+EK V+ + H ++ +
Sbjct: 84 KDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDATSVEK-----VLDQKEHRLDGR 138
Query: 174 KIEAKKAKAKSG----KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFC 229
I+ KKA A KIFVGGL+PE +E+I+ +F +FG I E+P D ++R+ F
Sbjct: 139 VIDPKKAMAMKKDPVKKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKSNKRRGFV 198
Query: 230 FITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
FIT++ E V +L+ ++ + ++K A PK
Sbjct: 199 FITYKEEEPVKKVLEKKFHTVSGSKCEIKVAQPK 232
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 38/47 (80%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D ++LK++F+K+GE+ + T+K DPNTGRSRGF FI+FKD S+EK
Sbjct: 80 DTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDATSVEK 126
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 52/87 (59%)
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
+I A K + +GK+FVGGLS + +++K +F +FG +++ + D + + + F FI F
Sbjct: 59 QINASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILF 118
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKA 260
+ + V +L + +++ + +D KKA
Sbjct: 119 KDATSVEKVLDQKEHRLDGRVIDPKKA 145
Score = 46.2 bits (108), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
G+ + TEE ++E+F ++GEIE + L DP + + RGF FI +K+ E ++K
Sbjct: 160 GLNPEATEEKIREYFGEFGEIEAIELPMDPKSNKRRGFVFITYKEEEPVKK 210
>gi|71896731|ref|NP_001026314.1| heterogeneous nuclear ribonucleoprotein D0 [Gallus gallus]
gi|326918726|ref|XP_003205639.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0-like
[Meleagris gallopavo]
gi|53135954|emb|CAG32472.1| hypothetical protein RCJMB04_26e18 [Gallus gallus]
Length = 257
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/155 (40%), Positives = 99/155 (63%), Gaps = 10/155 (6%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++LK++FSK+GE+ + TLK DP TGRSRGF F++FK++ES++K V+ + H +N K
Sbjct: 13 KDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDK-----VMDQKEHKLNGK 67
Query: 174 KIEAKKAKAKS-----GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNF 228
I+ K+AKA KIFVGGLSP+ +E+I+ +F FG + E+P D ++R+ F
Sbjct: 68 VIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGAFGEVESIELPMDNKTNKRRGF 127
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
CFITF+ E V +++ + + ++K A K
Sbjct: 128 CFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSK 162
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 39/48 (81%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
D ++LK++FSK+GE+ + TLK DP TGRSRGF F++FK++ES++K
Sbjct: 9 DTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKV 56
Score = 47.0 bits (110), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 43/74 (58%)
Query: 187 IFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNP 246
+F+GGLS + +++K +F++FG +++ + D + + F F+ F+ V ++
Sbjct: 1 MFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQK 60
Query: 247 KQKINDKEVDVKKA 260
+ K+N K +D K+A
Sbjct: 61 EHKLNGKVIDPKRA 74
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D E+++E+F +GE+E++ L D T + RGF FI FK+ E ++K
Sbjct: 94 DTPEEKIREYFGAFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 140
>gi|449267179|gb|EMC78145.1| Heterogeneous nuclear ribonucleoprotein A/B, partial [Columba
livia]
Length = 263
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/154 (41%), Positives = 98/154 (63%), Gaps = 9/154 (5%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++LK++F+K+GE+ + T+K DPNTGRSRGF FI+FK E SVE V+ + H ++ +
Sbjct: 14 KDLKDYFTKFGEVTDCTIKMDPNTGRSRGFGFILFK-----EPGSVEKVLEQKEHRLDGR 68
Query: 174 KIEAKKAKAKSG----KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFC 229
I+ KKA A KIFVGGL+PE +E+I+ +F +FG I E+P D ++R+ F
Sbjct: 69 LIDPKKAMAMKKDPVKKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKTNKRRGFV 128
Query: 230 FITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
FITF+ E V +L+ ++ + ++K A PK
Sbjct: 129 FITFKEEDPVKKVLEKKFHNVSGSKCEIKVAQPK 162
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 38/48 (79%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
D ++LK++F+K+GE+ + T+K DPNTGRSRGF FI+FK+ S+EK
Sbjct: 10 DTSKKDLKDYFTKFGEVTDCTIKMDPNTGRSRGFGFILFKEPGSVEKV 57
Score = 47.4 bits (111), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 31/44 (70%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
E+++E+F ++GEIE + L DP T + RGF FI FK+ + ++K
Sbjct: 98 EKIREYFGEFGEIEAIELPMDPKTNKRRGFVFITFKEEDPVKKV 141
Score = 45.8 bits (107), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 44/75 (58%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+FVGGLS + +++K +F +FG + + + D + + + F FI F+ V +L+
Sbjct: 1 KMFVGGLSWDTSKKDLKDYFTKFGEVTDCTIKMDPNTGRSRGFGFILFKEPGSVEKVLEQ 60
Query: 246 PKQKINDKEVDVKKA 260
+ +++ + +D KKA
Sbjct: 61 KEHRLDGRLIDPKKA 75
>gi|198413013|ref|XP_002122562.1| PREDICTED: similar to heterogeneous nuclear ribonucleoprotein A/B,
partial [Ciona intestinalis]
Length = 277
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 60/157 (38%), Positives = 99/157 (63%), Gaps = 8/157 (5%)
Query: 115 ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNKK 174
+LKE+F ++G++ + +K + TGRSRGF FI+F D S++K V+ +H+++ +
Sbjct: 56 KLKEYFEQFGQVRDCIIKRELETGRSRGFGFILFADASSVQK-----VVDAKSHLLDGRN 110
Query: 175 IEAKKAKA--KSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFIT 232
I+ KKAKA K K+FVGGL+P+ E I+AHF +FG + E P D++ + + FCFIT
Sbjct: 111 IDPKKAKALRKDSKLFVGGLNPDTTQETIQAHFEKFGEVDSIERPVDRNTGKHRGFCFIT 170
Query: 233 FEHESVVIDLLKNPK-QKINDKEVDVKKATPKPEPFG 268
F + V+ D++ N + Q I+ ++ + K PK + G
Sbjct: 171 FCKDGVIHDIIDNNRYQTIDGRQCECKDGDPKKQNKG 207
Score = 47.8 bits (112), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 31/43 (72%)
Query: 609 ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
+LKE+F ++G++ + +K + TGRSRGF FI+F D S++K
Sbjct: 56 KLKEYFEQFGQVRDCIIKRELETGRSRGFGFILFADASSVQKV 98
Score = 43.1 bits (100), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 6/71 (8%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNH-VINN 172
E ++ HF K+GE++++ D NTG+ RGF FI F + + D+I + I+
Sbjct: 137 ETIQAHFEKFGEVDSIERPVDRNTGKHRGFCFITF-----CKDGVIHDIIDNNRYQTIDG 191
Query: 173 KKIEAKKAKAK 183
++ E K K
Sbjct: 192 RQCECKDGDPK 202
Score = 42.7 bits (99), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 25/39 (64%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVF 642
D E ++ HF K+GE++++ D NTG+ RGF FI F
Sbjct: 133 DTTQETIQAHFEKFGEVDSIERPVDRNTGKHRGFCFITF 171
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 41/76 (53%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GK+FVGGLS + + ++K +F QFG + + + + + + F FI F S V ++
Sbjct: 41 GKMFVGGLSWDTDEFKLKEYFEQFGQVRDCIIKRELETGRSRGFGFILFADASSVQKVVD 100
Query: 245 NPKQKINDKEVDVKKA 260
++ + +D KKA
Sbjct: 101 AKSHLLDGRNIDPKKA 116
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPK-QKINDKEVDVKKATPKPEPFG 502
E+ E P D++ + + FCFITF + V+ D++ N + Q I+ ++ + K PK + G
Sbjct: 148 EVDSIERPVDRNTGKHRGFCFITFCKDGVIHDIIDNNRYQTIDGRQCECKDGDPKKQNKG 207
>gi|380014686|ref|XP_003691353.1| PREDICTED: RNA-binding protein Musashi homolog Rbp6-like [Apis
florea]
Length = 410
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 67/159 (42%), Positives = 96/159 (60%), Gaps = 14/159 (8%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
E L+E+F+KYG+I V + DP T RSRGF FI F D ASV+ V+A+GNH ++ K
Sbjct: 36 ESLREYFTKYGDITEVMVMKDPTTRRSRGFGFITFAD-----PASVDKVLAQGNHELDGK 90
Query: 174 KIEAK---------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQ 224
KI+ K K ++ KIFVGGLS E++K +F QFG I + + +DK ++
Sbjct: 91 KIDPKVAFPRRTHPKMVTRTKKIFVGGLSAPTTLEDVKNYFEQFGPIEDAMLMFDKQTNR 150
Query: 225 RKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ F F+TF+ E VV + + +IN+K V+ KKA PK
Sbjct: 151 HRGFGFVTFQSEDVVDKVCEIHFHEINNKMVECKKAQPK 189
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 54/96 (56%), Gaps = 4/96 (4%)
Query: 172 NKKIEAKKAKAK----SGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKN 227
N++I A + A+ GK+F+GGLS + E ++ +F ++G+I E + D + + +
Sbjct: 5 NQEIVASGSPAEVPNDPGKMFIGGLSWQTSPESLREYFTKYGDITEVMVMKDPTTRRSRG 64
Query: 228 FCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
F FITF + V +L +++ K++D K A P+
Sbjct: 65 FGFITFADPASVDKVLAQGNHELDGKKIDPKVAFPR 100
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 30/43 (69%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
E L+E+F+KYG+I V + DP T RSRGF FI F D S++K
Sbjct: 36 ESLREYFTKYGDITEVMVMKDPTTRRSRGFGFITFADPASVDK 78
>gi|113931574|ref|NP_001039236.1| heterogeneous nuclear ribonucleoprotein A/B [Xenopus (Silurana)
tropicalis]
gi|89272441|emb|CAJ82657.1| heterogeneous nuclear ribonucleoprotein A/B [Xenopus (Silurana)
tropicalis]
Length = 313
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/154 (41%), Positives = 98/154 (63%), Gaps = 9/154 (5%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++LK++FSK+GE+ + T+K DPNTGRSRGF FI+FKD ASV+ V+ + H ++ +
Sbjct: 66 KDLKDYFSKFGEVSDCTIKMDPNTGRSRGFGFILFKDA-----ASVDKVLEQKEHRLDGR 120
Query: 174 KIEAKKAKAKSG----KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFC 229
I+ KKA A KIFVGGL+PE +++I+ +F FG I E+P D ++R+ F
Sbjct: 121 LIDPKKAMAMKKDPIKKIFVGGLNPEAGEDKIREYFETFGEIEAIELPMDPKTNKRRGFV 180
Query: 230 FITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
FITF+ E V +L+ ++ + ++K A PK
Sbjct: 181 FITFKEEEPVKKILEKKFHNVSGSKCEIKIAQPK 214
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 38/47 (80%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D ++LK++FSK+GE+ + T+K DPNTGRSRGF FI+FKD S++K
Sbjct: 62 DTSKKDLKDYFSKFGEVSDCTIKMDPNTGRSRGFGFILFKDAASVDK 108
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 61/109 (55%)
Query: 152 ESLEKASVEDVIAEGNHVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNI 211
E+ + + E + G + +I A K + +GK+FVGGLS + +++K +F++FG +
Sbjct: 19 EACDAEAAESKVPGGQNGAEGDQINASKGEEDAGKMFVGGLSWDTSKKDLKDYFSKFGEV 78
Query: 212 IETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKA 260
+ + D + + + F FI F+ + V +L+ + +++ + +D KKA
Sbjct: 79 SDCTIKMDPNTGRSRGFGFILFKDAASVDKVLEQKEHRLDGRLIDPKKA 127
Score = 46.6 bits (109), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 30/43 (69%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
++++E+F +GEIE + L DP T + RGF FI FK+ E ++K
Sbjct: 150 DKIREYFETFGEIEAIELPMDPKTNKRRGFVFITFKEEEPVKK 192
>gi|171846711|gb|AAI61598.1| LOC734098 protein [Xenopus (Silurana) tropicalis]
Length = 280
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/154 (41%), Positives = 98/154 (63%), Gaps = 9/154 (5%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++LK++FSK+GE+ + T+K DPNTGRSRGF FI+FKD ASV+ V+ + H ++ +
Sbjct: 33 KDLKDYFSKFGEVSDCTIKMDPNTGRSRGFGFILFKDA-----ASVDKVLEQKEHRLDGR 87
Query: 174 KIEAKKAKAKSG----KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFC 229
I+ KKA A KIFVGGL+PE +++I+ +F FG I E+P D ++R+ F
Sbjct: 88 LIDPKKAMAMKKDPIKKIFVGGLNPEAGEDKIREYFETFGEIEAIELPMDPKTNKRRGFV 147
Query: 230 FITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
FITF+ E V +L+ ++ + ++K A PK
Sbjct: 148 FITFKEEEPVKKILEKKFHNVSGSKFEIKIAQPK 181
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 38/48 (79%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
D ++LK++FSK+GE+ + T+K DPNTGRSRGF FI+FKD S++K
Sbjct: 29 DTSKKDLKDYFSKFGEVSDCTIKMDPNTGRSRGFGFILFKDAASVDKV 76
Score = 46.6 bits (109), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 30/43 (69%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
++++E+F +GEIE + L DP T + RGF FI FK+ E ++K
Sbjct: 117 DKIREYFETFGEIEAIELPMDPKTNKRRGFVFITFKEEEPVKK 159
Score = 46.6 bits (109), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 46/75 (61%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+FVGGLS + +++K +F++FG + + + D + + + F FI F+ + V +L+
Sbjct: 20 KMFVGGLSWDTSKKDLKDYFSKFGEVSDCTIKMDPNTGRSRGFGFILFKDAASVDKVLEQ 79
Query: 246 PKQKINDKEVDVKKA 260
+ +++ + +D KKA
Sbjct: 80 KEHRLDGRLIDPKKA 94
>gi|189241054|ref|XP_968171.2| PREDICTED: similar to CG32169 CG32169-PA [Tribolium castaneum]
Length = 525
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/177 (39%), Positives = 100/177 (56%), Gaps = 14/177 (7%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
E L+E+FSKYG+I V + DP T RSRGF FI F D ASV+ V+A+G H ++ K
Sbjct: 136 ESLREYFSKYGDITEVMVMKDPATRRSRGFGFITFTD-----PASVDKVLAQGTHELDGK 190
Query: 174 KIEAK---------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQ 224
KI+ K K ++ KIFVGGLS E++K++F QFG I + + +DK ++
Sbjct: 191 KIDPKVAFPRRAHPKMVTRTKKIFVGGLSAPTTLEDVKSYFEQFGPIEDAMLMFDKQTNR 250
Query: 225 RKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGVRGGRGGRGGRGG 281
+ F F+TF+ E VV + + +IN+K V+ KKA PK + GRG
Sbjct: 251 HRGFGFVTFQSEDVVDKVCEIHFHEINNKMVECKKAQPKEVMLPANLAKTRAAGRGA 307
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/43 (55%), Positives = 30/43 (69%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
E L+E+FSKYG+I V + DP T RSRGF FI F D S++K
Sbjct: 136 ESLREYFSKYGDITEVMVMKDPATRRSRGFGFITFTDPASVDK 178
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 55/97 (56%), Gaps = 4/97 (4%)
Query: 171 NNKKIEAKKAKAK----SGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRK 226
N++I A + A+ GK+F+GGLS + E ++ +F+++G+I E + D + + +
Sbjct: 104 QNQEIVASGSPAEVPNDPGKMFIGGLSWQTSPESLREYFSKYGDITEVMVMKDPATRRSR 163
Query: 227 NFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
F FITF + V +L +++ K++D K A P+
Sbjct: 164 GFGFITFTDPASVDKVLAQGTHELDGKKIDPKVAFPR 200
Score = 39.3 bits (90), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 43/107 (40%), Gaps = 20/107 (18%)
Query: 452 YDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGVRGGRGGRG 511
+DK ++ + F F+TF+ E VV + + +IN+K V+ KKA PK +
Sbjct: 244 FDKQTNRHRGFGFVTFQSEDVVDKVCEIHFHEINNKMVECKKAQPKEVMLPANLAKTRAA 303
Query: 512 GRGGRGGRM--------------------AGGYGGYGGYGGGYGELD 538
GRG M GY GY +G Y +D
Sbjct: 304 GRGAYDNFMWSLGALPDGFPAAAYAAYAAGRGYSGYPSFGLPYPTVD 350
>gi|350398654|ref|XP_003485263.1| PREDICTED: RNA-binding protein Musashi homolog Rbp6-like [Bombus
impatiens]
Length = 410
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 67/159 (42%), Positives = 96/159 (60%), Gaps = 14/159 (8%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
E L+E+F+KYG+I V + DP T RSRGF FI F D ASV+ V+A+GNH ++ K
Sbjct: 36 ESLREYFTKYGDITEVMVMKDPTTRRSRGFGFITFAD-----PASVDKVLAQGNHELDGK 90
Query: 174 KIEAK---------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQ 224
KI+ K K ++ KIFVGGLS E++K +F QFG I + + +DK ++
Sbjct: 91 KIDPKVAFPRRTHPKMVTRTKKIFVGGLSAPTTLEDVKNYFEQFGPIEDAMLMFDKQTNR 150
Query: 225 RKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ F F+TF+ E VV + + +IN+K V+ KKA PK
Sbjct: 151 HRGFGFVTFQSEDVVDKVCEIHFHEINNKMVECKKAQPK 189
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 54/96 (56%), Gaps = 4/96 (4%)
Query: 172 NKKIEAKKAKAK----SGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKN 227
N++I A + A+ GK+F+GGLS + E ++ +F ++G+I E + D + + +
Sbjct: 5 NQEIVASGSPAEVPNDPGKMFIGGLSWQTSPESLREYFTKYGDITEVMVMKDPTTRRSRG 64
Query: 228 FCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
F FITF + V +L +++ K++D K A P+
Sbjct: 65 FGFITFADPASVDKVLAQGNHELDGKKIDPKVAFPR 100
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 30/43 (69%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
E L+E+F+KYG+I V + DP T RSRGF FI F D S++K
Sbjct: 36 ESLREYFTKYGDITEVMVMKDPTTRRSRGFGFITFADPASVDK 78
>gi|395542043|ref|XP_003772944.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 [Sarcophilus
harrisii]
Length = 306
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 63/155 (40%), Positives = 99/155 (63%), Gaps = 10/155 (6%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++LK++FSK+GE+ + TLK DP TGRSRGF F++FK++ES++K V+ + H +N K
Sbjct: 62 KDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDK-----VMDQKEHKLNGK 116
Query: 174 KIEAKKAKAKS-----GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNF 228
I+ K+AKA KIFVGGLSP+ +E+I+ +F FG + E+P D ++R+ F
Sbjct: 117 VIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGF 176
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
CFITF+ E V +++ + + ++K A K
Sbjct: 177 CFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSK 211
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 39/48 (81%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
D ++LK++FSK+GE+ + TLK DP TGRSRGF F++FK++ES++K
Sbjct: 58 DTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKV 105
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 49/85 (57%)
Query: 176 EAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEH 235
EA A+ + K+F+GGLS + +++K +F++FG +++ + D + + F F+ F+
Sbjct: 39 EAATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKE 98
Query: 236 ESVVIDLLKNPKQKINDKEVDVKKA 260
V ++ + K+N K +D K+A
Sbjct: 99 SESVDKVMDQKEHKLNGKVIDPKRA 123
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D E+++E+F +GE+E++ L D T + RGF FI FK+ E ++K
Sbjct: 143 DTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 189
>gi|344249843|gb|EGW05947.1| Heterogeneous nuclear ribonucleoprotein D0 [Cricetulus griseus]
Length = 257
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 63/155 (40%), Positives = 99/155 (63%), Gaps = 10/155 (6%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++LK++FSK+GE+ + TLK DP TGRSRGF F++FK++ES++K V+ + H +N K
Sbjct: 13 KDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDK-----VMDQKEHKLNGK 67
Query: 174 KIEAKKAKAKS-----GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNF 228
I+ K+AKA KIFVGGLSP+ +E+I+ +F FG + E+P D ++R+ F
Sbjct: 68 VIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGF 127
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
CFITF+ E V +++ + + ++K A K
Sbjct: 128 CFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSK 162
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 39/48 (81%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
D ++LK++FSK+GE+ + TLK DP TGRSRGF F++FK++ES++K
Sbjct: 9 DTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKV 56
Score = 47.4 bits (111), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 43/74 (58%)
Query: 187 IFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNP 246
+F+GGLS + +++K +F++FG +++ + D + + F F+ F+ V ++
Sbjct: 1 MFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQK 60
Query: 247 KQKINDKEVDVKKA 260
+ K+N K +D K+A
Sbjct: 61 EHKLNGKVIDPKRA 74
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D E+++E+F +GE+E++ L D T + RGF FI FK+ E ++K
Sbjct: 94 DTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 140
>gi|119626277|gb|EAX05872.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa), isoform CRA_a [Homo sapiens]
Length = 377
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 63/155 (40%), Positives = 99/155 (63%), Gaps = 10/155 (6%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++LK++FSK+GE+ + TLK DP TGRSRGF F++FK++ES++K V+ + H +N K
Sbjct: 111 KDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDK-----VMDQKEHKLNGK 165
Query: 174 KIEAKKAKAKS-----GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNF 228
I+ K+AKA KIFVGGLSP+ +E+I+ +F FG + E+P D ++R+ F
Sbjct: 166 VIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGF 225
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
CFITF+ E V +++ + + ++K A K
Sbjct: 226 CFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSK 260
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 39/47 (82%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D ++LK++FSK+GE+ + TLK DP TGRSRGF F++FK++ES++K
Sbjct: 107 DTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDK 153
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 54/96 (56%)
Query: 165 EGNHVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQ 224
EG+ + + EA A+ + K+F+GGLS + +++K +F++FG +++ + D +
Sbjct: 77 EGHSNSSPRHSEAATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGR 136
Query: 225 RKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKA 260
+ F F+ F+ V ++ + K+N K +D K+A
Sbjct: 137 SRGFGFVLFKESESVDKVMDQKEHKLNGKVIDPKRA 172
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D E+++E+F +GE+E++ L D T + RGF FI FK+ E ++K
Sbjct: 192 DTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 238
>gi|354497793|ref|XP_003511003.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0-like
[Cricetulus griseus]
Length = 286
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 63/155 (40%), Positives = 99/155 (63%), Gaps = 10/155 (6%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++LK++FSK+GE+ + TLK DP TGRSRGF F++FK++ES++K V+ + H +N K
Sbjct: 42 KDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDK-----VMDQKEHKLNGK 96
Query: 174 KIEAKKAKAKS-----GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNF 228
I+ K+AKA KIFVGGLSP+ +E+I+ +F FG + E+P D ++R+ F
Sbjct: 97 VIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGF 156
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
CFITF+ E V +++ + + ++K A K
Sbjct: 157 CFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSK 191
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 39/48 (81%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
D ++LK++FSK+GE+ + TLK DP TGRSRGF F++FK++ES++K
Sbjct: 38 DTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKV 85
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 49/85 (57%)
Query: 176 EAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEH 235
EA A+ + K+F+GGLS + +++K +F++FG +++ + D + + F F+ F+
Sbjct: 19 EAATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKE 78
Query: 236 ESVVIDLLKNPKQKINDKEVDVKKA 260
V ++ + K+N K +D K+A
Sbjct: 79 SESVDKVMDQKEHKLNGKVIDPKRA 103
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D E+++E+F +GE+E++ L D T + RGF FI FK+ E ++K
Sbjct: 123 DTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 169
>gi|426344801|ref|XP_004038942.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0, partial
[Gorilla gorilla gorilla]
Length = 291
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 63/155 (40%), Positives = 99/155 (63%), Gaps = 10/155 (6%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++LK++FSK+GE+ + TLK DP TGRSRGF F++FK++ES++K V+ + H +N K
Sbjct: 47 KDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDK-----VMDQKEHKLNGK 101
Query: 174 KIEAKKAKAKS-----GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNF 228
I+ K+AKA KIFVGGLSP+ +E+I+ +F FG + E+P D ++R+ F
Sbjct: 102 VIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGF 161
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
CFITF+ E V +++ + + ++K A K
Sbjct: 162 CFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSK 196
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 39/48 (81%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
D ++LK++FSK+GE+ + TLK DP TGRSRGF F++FK++ES++K
Sbjct: 43 DTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKV 90
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 49/85 (57%)
Query: 176 EAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEH 235
EA A+ + K+F+GGLS + +++K +F++FG +++ + D + + F F+ F+
Sbjct: 24 EAATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKE 83
Query: 236 ESVVIDLLKNPKQKINDKEVDVKKA 260
V ++ + K+N K +D K+A
Sbjct: 84 SESVDKVMDQKEHKLNGKVIDPKRA 108
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D E+++E+F +GE+E++ L D T + RGF FI FK+ E ++K
Sbjct: 128 DTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 174
>gi|1362732|pir||S56750 single stranded D box binding factor 2 - chicken
Length = 353
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 64/154 (41%), Positives = 98/154 (63%), Gaps = 9/154 (5%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++LK++F+K+GE+ + T+K DPNTGRSRGF FI+FK E SVE V+ + H ++ +
Sbjct: 104 KDLKDYFTKFGEVTDCTIKMDPNTGRSRGFGFILFK-----EPGSVEKVLEQKEHRLDGR 158
Query: 174 KIEAKKAKAKSG----KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFC 229
I+ KKA A KIFVGGL+PE +E+I+ +F +FG I E+P D ++R+ F
Sbjct: 159 LIDPKKAMAMKKDPVKKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKTNKRRGFV 218
Query: 230 FITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
FITF+ E V +L+ ++ + ++K A PK
Sbjct: 219 FITFKEEDPVKKVLEKKFHNVSGSKCEIKVAQPK 252
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 38/47 (80%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D ++LK++F+K+GE+ + T+K DPNTGRSRGF FI+FK+ S+EK
Sbjct: 100 DTSKKDLKDYFTKFGEVTDCTIKMDPNTGRSRGFGFILFKEPGSVEK 146
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 51/87 (58%)
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
+I A K + +GK+FVGGLS + +++K +F +FG + + + D + + + F FI F
Sbjct: 79 QINASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVTDCTIKMDPNTGRSRGFGFILF 138
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKA 260
+ V +L+ + +++ + +D KKA
Sbjct: 139 KEPGSVEKVLEQKEHRLDGRLIDPKKA 165
Score = 47.0 bits (110), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
G+ + TEE ++E+F ++GEIE + L DP T + RGF FI FK+ + ++K
Sbjct: 180 GLNPEATEEKIREYFGEFGEIEAIELPMDPKTNKRRGFVFITFKEEDPVKK 230
>gi|348551765|ref|XP_003461700.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B-like [Cavia
porcellus]
Length = 327
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 65/154 (42%), Positives = 98/154 (63%), Gaps = 9/154 (5%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++LK++F+K+GE+ + T+K DPNTGRSRGF FI+FKD S+EK V+ + H ++ +
Sbjct: 84 KDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDATSVEK-----VLDQKEHRLDGR 138
Query: 174 KIEAKKAKAKSG----KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFC 229
I+ KKA A KIFVGGL+PE +E+I+ +F FG I E+P D ++R+ F
Sbjct: 139 VIDPKKAMAMKKDPVKKIFVGGLNPEATEEKIREYFGDFGEIEAIELPMDPKLNKRRGFV 198
Query: 230 FITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
FITF+ E V +L+ I+ + ++K A PK
Sbjct: 199 FITFKEEEPVKKVLEKKFHTISGSKCEIKVAQPK 232
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 38/47 (80%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D ++LK++F+K+GE+ + T+K DPNTGRSRGF FI+FKD S+EK
Sbjct: 80 DTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDATSVEK 126
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 52/87 (59%)
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
+I A K + +GK+FVGGLS + +++K +F +FG +++ + D + + + F FI F
Sbjct: 59 QINASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILF 118
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKA 260
+ + V +L + +++ + +D KKA
Sbjct: 119 KDATSVEKVLDQKEHRLDGRVIDPKKA 145
Score = 45.8 bits (107), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
G+ + TEE ++E+F +GEIE + L DP + RGF FI FK+ E ++K
Sbjct: 160 GLNPEATEEKIREYFGDFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKK 210
>gi|387016396|gb|AFJ50317.1| Heterogeneous nuclear ribonucleoprotein D0 isoform b [Crotalus
adamanteus]
Length = 330
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 60/150 (40%), Positives = 96/150 (64%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++LK++F+K+GE+ + TLK DP TGRSRGF F++FK++ES+EK + + VI+ K
Sbjct: 86 KDLKDYFTKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVEKVTDQKEHKLNGKVIDPK 145
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
+ +A K K KIFVGGLSP+ +E+I+ +F FG + E+P D ++R+ FCFITF
Sbjct: 146 RAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITF 205
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ E V +++ + + ++K A K
Sbjct: 206 KDEEAVKKIMEKKYHNVGLSKCEIKVAMSK 235
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 40/49 (81%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKAS 652
D ++LK++F+K+GE+ + TLK DP TGRSRGF F++FK++ES+EK +
Sbjct: 82 DTTKKDLKDYFTKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVEKVT 130
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 49/87 (56%)
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
KI+A K + GK+FVGGLS + +++K +F +FG +++ + D + + F F+ F
Sbjct: 61 KIDASKNEEDEGKMFVGGLSWDTTKKDLKDYFTKFGEVVDCTLKLDPITGRSRGFGFVLF 120
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKA 260
+ V + + K+N K +D K+A
Sbjct: 121 KESESVEKVTDQKEHKLNGKVIDPKRA 147
Score = 46.6 bits (109), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 32/47 (68%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D E+++E+F +GE+E++ L D T + RGF FI FKD E+++K
Sbjct: 167 DTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKDEEAVKK 213
>gi|148224084|ref|NP_001080489.1| heterogeneous nuclear ribonucleoprotein A/B [Xenopus laevis]
gi|27694771|gb|AAH43814.1| Hnrpab-prov protein [Xenopus laevis]
Length = 324
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 63/154 (40%), Positives = 98/154 (63%), Gaps = 9/154 (5%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++LK++F+K+GE+ + T+K DPNTGRSRGF FI+FKD ES++K V+ H ++ +
Sbjct: 78 KDLKDYFAKFGEVSDCTIKMDPNTGRSRGFGFILFKDAESVDK-----VLEHKEHRLDGR 132
Query: 174 KIEAKKAKAKSG----KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFC 229
I+ KKA A KIFVGGL+PE +++I+ +F FG I E+P D ++R+ F
Sbjct: 133 LIDPKKAMAMKKDPIKKIFVGGLNPEAGEDQIREYFETFGEIEAIELPMDPKTNKRRGFV 192
Query: 230 FITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
FITF+ E V +L+ ++ + ++K A PK
Sbjct: 193 FITFKEEDPVKKILEKKFHNVSGSKCEIKIAQPK 226
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 39/47 (82%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D ++LK++F+K+GE+ + T+K DPNTGRSRGF FI+FKD ES++K
Sbjct: 74 DTSKKDLKDYFAKFGEVSDCTIKMDPNTGRSRGFGFILFKDAESVDK 120
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 62/122 (50%), Gaps = 13/122 (10%)
Query: 152 ESLEKASVEDVIAEGNHVINNKKIEAKKAKAKSG-------------KIFVGGLSPEMKD 198
E+ + + ED G + ++I A K + +G K+FVGGLS +
Sbjct: 18 EACDAEAAEDKAPAGQNGAEGEQINASKGEEDAGCVADISSPLTEGVKMFVGGLSWDTSK 77
Query: 199 EEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVK 258
+++K +FA+FG + + + D + + + F FI F+ V +L++ + +++ + +D K
Sbjct: 78 KDLKDYFAKFGEVSDCTIKMDPNTGRSRGFGFILFKDAESVDKVLEHKEHRLDGRLIDPK 137
Query: 259 KA 260
KA
Sbjct: 138 KA 139
Score = 45.8 bits (107), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 30/43 (69%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
++++E+F +GEIE + L DP T + RGF FI FK+ + ++K
Sbjct: 162 DQIREYFETFGEIEAIELPMDPKTNKRRGFVFITFKEEDPVKK 204
>gi|351695030|gb|EHA97948.1| Heterogeneous nuclear ribonucleoprotein D0, partial [Heterocephalus
glaber]
Length = 277
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 63/155 (40%), Positives = 99/155 (63%), Gaps = 10/155 (6%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++LK++FSK+GE+ + TLK DP TGRSRGF F++FK++ES++K V+ + H +N K
Sbjct: 33 KDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDK-----VMDQKEHKLNGK 87
Query: 174 KIEAKKAKAKS-----GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNF 228
I+ K+AKA KIFVGGLSP+ +E+I+ +F FG + E+P D ++R+ F
Sbjct: 88 VIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGF 147
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
CFITF+ E V +++ + + ++K A K
Sbjct: 148 CFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSK 182
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 39/48 (81%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
D ++LK++FSK+GE+ + TLK DP TGRSRGF F++FK++ES++K
Sbjct: 29 DTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKV 76
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 49/85 (57%)
Query: 176 EAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEH 235
EA A+ + K+F+GGLS + +++K +F++FG +++ + D + + F F+ F+
Sbjct: 10 EAATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKE 69
Query: 236 ESVVIDLLKNPKQKINDKEVDVKKA 260
V ++ + K+N K +D K+A
Sbjct: 70 SESVDKVMDQKEHKLNGKVIDPKRA 94
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D E+++E+F +GE+E++ L D T + RGF FI FK+ E ++K
Sbjct: 114 DTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 160
>gi|440898655|gb|ELR50103.1| Heterogeneous nuclear ribonucleoprotein D0, partial [Bos grunniens
mutus]
Length = 277
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 63/155 (40%), Positives = 99/155 (63%), Gaps = 10/155 (6%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++LK++FSK+GE+ + TLK DP TGRSRGF F++FK++ES++K V+ + H +N K
Sbjct: 33 KDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDK-----VMDQKEHKLNGK 87
Query: 174 KIEAKKAKAKS-----GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNF 228
I+ K+AKA KIFVGGLSP+ +E+I+ +F FG + E+P D ++R+ F
Sbjct: 88 VIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGF 147
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
CFITF+ E V +++ + + ++K A K
Sbjct: 148 CFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSK 182
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 39/48 (81%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
D ++LK++FSK+GE+ + TLK DP TGRSRGF F++FK++ES++K
Sbjct: 29 DTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKV 76
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 49/85 (57%)
Query: 176 EAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEH 235
EA A+ + K+F+GGLS + +++K +F++FG +++ + D + + F F+ F+
Sbjct: 10 EAATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKE 69
Query: 236 ESVVIDLLKNPKQKINDKEVDVKKA 260
V ++ + K+N K +D K+A
Sbjct: 70 SESVDKVMDQKEHKLNGKVIDPKRA 94
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D E+++E+F +GE+E++ L D T + RGF FI FK+ E ++K
Sbjct: 114 DTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 160
>gi|302780479|ref|XP_002972014.1| hypothetical protein SELMODRAFT_172407 [Selaginella moellendorffii]
gi|302781554|ref|XP_002972551.1| hypothetical protein SELMODRAFT_172861 [Selaginella moellendorffii]
gi|300160018|gb|EFJ26637.1| hypothetical protein SELMODRAFT_172861 [Selaginella moellendorffii]
gi|300160313|gb|EFJ26931.1| hypothetical protein SELMODRAFT_172407 [Selaginella moellendorffii]
Length = 167
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 64/154 (41%), Positives = 93/154 (60%), Gaps = 10/154 (6%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
E+LKE+F YG++ + D TGR RGF F+VF D + V D + + H IN K
Sbjct: 20 EKLKEYFQSYGDVVEAMIMKDRTTGRGRGFGFVVFADPD------VADRVVQDKHSINGK 73
Query: 174 KIEAKKA----KAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFC 229
+EAKKA + ++ KIFVGGL+P + +EE K +F QFGNI + + YD + + + F
Sbjct: 74 LVEAKKAVPRDEHQNAKIFVGGLAPNVSEEEFKQYFEQFGNITDIVVMYDHATQRPRGFG 133
Query: 230 FITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
FITF+ E V +L+ ++ DK V+VK+A PK
Sbjct: 134 FITFDSEEAVDSVLQKTFHELKDKMVEVKRAVPK 167
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Query: 182 AKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVID 241
+ GKIFVGG+S E DE++K +F +G+++E + D++ + + F F+ F V D
Sbjct: 3 SDQGKIFVGGVSWETTDEKLKEYFQSYGDVVEAMIMKDRTTGRGRGFGFVVFADPDVA-D 61
Query: 242 LLKNPKQKINDKEVDVKKATPKPE 265
+ K IN K V+ KKA P+ E
Sbjct: 62 RVVQDKHSINGKLVEAKKAVPRDE 85
Score = 43.9 bits (102), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 27/44 (61%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
E+LKE+F YG++ + D TGR RGF F+VF D + ++
Sbjct: 20 EKLKEYFQSYGDVVEAMIMKDRTTGRGRGFGFVVFADPDVADRV 63
Score = 38.9 bits (89), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 31/53 (58%)
Query: 445 IIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 497
I + + YD + + + F FITF+ E V +L+ ++ DK V+VK+A PK
Sbjct: 115 ITDIVVMYDHATQRPRGFGFITFDSEEAVDSVLQKTFHELKDKMVEVKRAVPK 167
>gi|355765936|gb|EHH62474.1| Heterogeneous nuclear ribonucleoprotein D0, partial [Macaca
fascicularis]
Length = 302
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 63/155 (40%), Positives = 99/155 (63%), Gaps = 10/155 (6%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++LK++FSK+GE+ + TLK DP TGRSRGF F++FK++ES++K V+ + H +N K
Sbjct: 58 KDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDK-----VMDQKEHKLNGK 112
Query: 174 KIEAKKAKAKS-----GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNF 228
I+ K+AKA KIFVGGLSP+ +E+I+ +F FG + E+P D ++R+ F
Sbjct: 113 VIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGF 172
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
CFITF+ E V +++ + + ++K A K
Sbjct: 173 CFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSK 207
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 39/47 (82%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D ++LK++FSK+GE+ + TLK DP TGRSRGF F++FK++ES++K
Sbjct: 54 DTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDK 100
Score = 52.4 bits (124), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 54/96 (56%)
Query: 165 EGNHVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQ 224
EG+ + + EA A+ + K+F+GGLS + +++K +F++FG +++ + D +
Sbjct: 24 EGHSNSSPRHSEAATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGR 83
Query: 225 RKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKA 260
+ F F+ F+ V ++ + K+N K +D K+A
Sbjct: 84 SRGFGFVLFKESESVDKVMDQKEHKLNGKVIDPKRA 119
Score = 43.9 bits (102), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D E+++E+F +GE+E++ L D T + RGF FI FK+ E ++K
Sbjct: 139 DTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 185
>gi|870743|dbj|BAA09522.1| heterogeneous nuclear ribonucleoprotein D (hnRNP D) [Homo sapiens]
Length = 267
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 63/155 (40%), Positives = 99/155 (63%), Gaps = 10/155 (6%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++LK++FSK+GE+ + TLK DP TGRSRGF F++FK++ES++K V+ + H +N K
Sbjct: 23 KDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDK-----VMDQKEHKLNGK 77
Query: 174 KIEAKKAKAKS-----GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNF 228
I+ K+AKA KIFVGGLSP+ +E+I+ +F FG + E+P D ++R+ F
Sbjct: 78 VIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGF 137
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
CFITF+ E V +++ + + ++K A K
Sbjct: 138 CFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSK 172
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 39/48 (81%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
D ++LK++FSK+GE+ + TLK DP TGRSRGF F++FK++ES++K
Sbjct: 19 DTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKV 66
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 48/84 (57%)
Query: 177 AKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHE 236
A K + GK+F+GGLS + +++K +F++FG +++ + D + + F F+ F+
Sbjct: 1 ASKNEEDEGKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKES 60
Query: 237 SVVIDLLKNPKQKINDKEVDVKKA 260
V ++ + K+N K +D K+A
Sbjct: 61 ESVDKVMDQKEHKLNGKVIDPKRA 84
Score = 44.3 bits (103), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D E+++E+F +GE+E++ L D T + RGF FI FK+ E ++K
Sbjct: 104 DTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 150
>gi|395834195|ref|XP_003790097.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 3
[Otolemur garnettii]
Length = 336
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 63/155 (40%), Positives = 99/155 (63%), Gaps = 10/155 (6%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++LK++FSK+GE+ + TLK DP TGRSRGF F++FK++ES++K V+ + H +N K
Sbjct: 92 KDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDK-----VMDQKEHKLNGK 146
Query: 174 KIEAKKAKAKS-----GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNF 228
I+ K+AKA KIFVGGLSP+ +E+I+ +F FG + E+P D ++R+ F
Sbjct: 147 VIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGF 206
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
CFITF+ E V +++ + + ++K A K
Sbjct: 207 CFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSK 241
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 39/48 (81%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
D ++LK++FSK+GE+ + TLK DP TGRSRGF F++FK++ES++K
Sbjct: 88 DTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKV 135
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 51/87 (58%)
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
KI+A K + GK+F+GGLS + +++K +F++FG +++ + D + + F F+ F
Sbjct: 67 KIDASKNEEDEGKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLF 126
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKA 260
+ V ++ + K+N K +D K+A
Sbjct: 127 KESESVDKVMDQKEHKLNGKVIDPKRA 153
Score = 44.3 bits (103), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D E+++E+F +GE+E++ L D T + RGF FI FK+ E ++K
Sbjct: 173 DTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 219
>gi|149046822|gb|EDL99596.1| heterogeneous nuclear ribonucleoprotein D, isoform CRA_f [Rattus
norvegicus]
gi|149046823|gb|EDL99597.1| heterogeneous nuclear ribonucleoprotein D, isoform CRA_f [Rattus
norvegicus]
Length = 257
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 62/155 (40%), Positives = 99/155 (63%), Gaps = 10/155 (6%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++LK++FSK+G++ + TLK DP TGRSRGF F++FK++ES++K V+ + H +N K
Sbjct: 13 KDLKDYFSKFGDVVDCTLKLDPITGRSRGFGFVLFKESESVDK-----VMDQKEHKLNGK 67
Query: 174 KIEAKKAKAKS-----GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNF 228
I+ K+AKA KIFVGGLSP+ +E+I+ +F FG + E+P D ++R+ F
Sbjct: 68 VIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGF 127
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
CFITF+ E V +++ + + ++K A K
Sbjct: 128 CFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSK 162
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 39/48 (81%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
D ++LK++FSK+G++ + TLK DP TGRSRGF F++FK++ES++K
Sbjct: 9 DTTKKDLKDYFSKFGDVVDCTLKLDPITGRSRGFGFVLFKESESVDKV 56
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 44/74 (59%)
Query: 187 IFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNP 246
+F+GGLS + +++K +F++FG++++ + D + + F F+ F+ V ++
Sbjct: 1 MFIGGLSWDTTKKDLKDYFSKFGDVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQK 60
Query: 247 KQKINDKEVDVKKA 260
+ K+N K +D K+A
Sbjct: 61 EHKLNGKVIDPKRA 74
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D E+++E+F +GE+E++ L D T + RGF FI FK+ E ++K
Sbjct: 94 DTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 140
>gi|14110417|ref|NP_112737.1| heterogeneous nuclear ribonucleoprotein D0 isoform b [Homo sapiens]
gi|332819428|ref|XP_003310368.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 [Pan
troglodytes]
gi|395735088|ref|XP_003776521.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 4
[Pongo abelii]
gi|402869393|ref|XP_003898747.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 3
[Papio anubis]
gi|2815614|gb|AAC23476.1| heterogeneous nuclear ribonucleoprotein D [Homo sapiens]
gi|119626279|gb|EAX05874.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa), isoform CRA_c [Homo sapiens]
gi|119626283|gb|EAX05878.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa), isoform CRA_c [Homo sapiens]
gi|119626288|gb|EAX05883.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa), isoform CRA_c [Homo sapiens]
gi|158258851|dbj|BAF85396.1| unnamed protein product [Homo sapiens]
gi|380783615|gb|AFE63683.1| heterogeneous nuclear ribonucleoprotein D0 isoform b [Macaca
mulatta]
gi|383417961|gb|AFH32194.1| heterogeneous nuclear ribonucleoprotein D0 isoform b [Macaca
mulatta]
gi|384940048|gb|AFI33629.1| heterogeneous nuclear ribonucleoprotein D0 isoform b [Macaca
mulatta]
Length = 336
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 63/155 (40%), Positives = 99/155 (63%), Gaps = 10/155 (6%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++LK++FSK+GE+ + TLK DP TGRSRGF F++FK++ES++K V+ + H +N K
Sbjct: 92 KDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDK-----VMDQKEHKLNGK 146
Query: 174 KIEAKKAKAKS-----GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNF 228
I+ K+AKA KIFVGGLSP+ +E+I+ +F FG + E+P D ++R+ F
Sbjct: 147 VIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGF 206
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
CFITF+ E V +++ + + ++K A K
Sbjct: 207 CFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSK 241
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 39/48 (81%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
D ++LK++FSK+GE+ + TLK DP TGRSRGF F++FK++ES++K
Sbjct: 88 DTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKV 135
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 51/87 (58%)
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
KI+A K + GK+F+GGLS + +++K +F++FG +++ + D + + F F+ F
Sbjct: 67 KIDASKNEEDEGKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLF 126
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKA 260
+ V ++ + K+N K +D K+A
Sbjct: 127 KESESVDKVMDQKEHKLNGKVIDPKRA 153
Score = 44.3 bits (103), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D E+++E+F +GE+E++ L D T + RGF FI FK+ E ++K
Sbjct: 173 DTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 219
>gi|410351153|gb|JAA42180.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa) [Pan troglodytes]
Length = 337
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 63/155 (40%), Positives = 99/155 (63%), Gaps = 10/155 (6%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++LK++FSK+GE+ + TLK DP TGRSRGF F++FK++ES++K V+ + H +N K
Sbjct: 93 KDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDK-----VMDQKEHKLNGK 147
Query: 174 KIEAKKAKAKS-----GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNF 228
I+ K+AKA KIFVGGLSP+ +E+I+ +F FG + E+P D ++R+ F
Sbjct: 148 VIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGF 207
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
CFITF+ E V +++ + + ++K A K
Sbjct: 208 CFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSK 242
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 39/48 (81%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
D ++LK++FSK+GE+ + TLK DP TGRSRGF F++FK++ES++K
Sbjct: 89 DTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKV 136
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 51/87 (58%)
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
KI+A K + GK+F+GGLS + +++K +F++FG +++ + D + + F F+ F
Sbjct: 68 KIDASKNEEDEGKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLF 127
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKA 260
+ V ++ + K+N K +D K+A
Sbjct: 128 KESESVDKVMDQKEHKLNGKVIDPKRA 154
Score = 44.3 bits (103), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D E+++E+F +GE+E++ L D T + RGF FI FK+ E ++K
Sbjct: 174 DTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 220
>gi|116256518|ref|NP_001070734.1| heterogeneous nuclear ribonucleoprotein D0 isoform b [Mus musculus]
gi|148688364|gb|EDL20311.1| heterogeneous nuclear ribonucleoprotein D, isoform CRA_a [Mus
musculus]
Length = 336
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 63/155 (40%), Positives = 99/155 (63%), Gaps = 10/155 (6%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++LK++FSK+GE+ + TLK DP TGRSRGF F++FK++ES++K V+ + H +N K
Sbjct: 92 KDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDK-----VMDQKEHKLNGK 146
Query: 174 KIEAKKAKAKS-----GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNF 228
I+ K+AKA KIFVGGLSP+ +E+I+ +F FG + E+P D ++R+ F
Sbjct: 147 VIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGF 206
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
CFITF+ E V +++ + + ++K A K
Sbjct: 207 CFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSK 241
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 39/48 (81%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
D ++LK++FSK+GE+ + TLK DP TGRSRGF F++FK++ES++K
Sbjct: 88 DTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKV 135
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 51/87 (58%)
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
KI+A K + GK+F+GGLS + +++K +F++FG +++ + D + + F F+ F
Sbjct: 67 KIDASKNEEDEGKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLF 126
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKA 260
+ V ++ + K+N K +D K+A
Sbjct: 127 KESESVDKVMDQKEHKLNGKVIDPKRA 153
Score = 44.3 bits (103), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D E+++E+F +GE+E++ L D T + RGF FI FK+ E ++K
Sbjct: 173 DTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 219
>gi|296196172|ref|XP_002745745.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0, partial
[Callithrix jacchus]
Length = 325
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 63/155 (40%), Positives = 99/155 (63%), Gaps = 10/155 (6%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++LK++FSK+GE+ + TLK DP TGRSRGF F++FK++ES++K V+ + H +N K
Sbjct: 81 KDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDK-----VMDQKEHKLNGK 135
Query: 174 KIEAKKAKAKS-----GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNF 228
I+ K+AKA KIFVGGLSP+ +E+I+ +F FG + E+P D ++R+ F
Sbjct: 136 VIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGF 195
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
CFITF+ E V +++ + + ++K A K
Sbjct: 196 CFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSK 230
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 39/47 (82%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D ++LK++FSK+GE+ + TLK DP TGRSRGF F++FK++ES++K
Sbjct: 77 DTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDK 123
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 54/96 (56%)
Query: 165 EGNHVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQ 224
EG+ + + EA A+ + K+F+GGLS + +++K +F++FG +++ + D +
Sbjct: 47 EGHSNSSPRHTEAATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGR 106
Query: 225 RKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKA 260
+ F F+ F+ V ++ + K+N K +D K+A
Sbjct: 107 SRGFGFVLFKESESVDKVMDQKEHKLNGKVIDPKRA 142
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D E+++E+F +GE+E++ L D T + RGF FI FK+ E ++K
Sbjct: 162 DTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 208
>gi|308448944|ref|XP_003087804.1| hypothetical protein CRE_15246 [Caenorhabditis remanei]
gi|308252629|gb|EFO96581.1| hypothetical protein CRE_15246 [Caenorhabditis remanei]
Length = 275
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 77/223 (34%), Positives = 105/223 (47%), Gaps = 22/223 (9%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
E+L HF++YGE+ +K D GRSRGFAF+ F E + A +A I K
Sbjct: 43 EDLSSHFTQYGEVSQAQVKYDRTNGRSRGFAFVEFTTGEGCKLA-----LAAREQTIKGK 97
Query: 174 KIEAKKAKAKSGK-IFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFIT 232
+E K AK++ K +FVGGL + ++E+++HF QFG + + E P+DK R+NF FI
Sbjct: 98 SVEVKPAKSRENKKVFVGGLPSDYSEQELRSHFEQFGKVDDIEWPFDKQTKTRRNFAFIV 157
Query: 233 FEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGVRGGR----------------GGR 276
FE E KQ +E DVKKA P+ + F GR G
Sbjct: 158 FEEEESADKASSQTKQTFGTRECDVKKAVPQGKRFPGAQGRIPGGRGMYGGRGGNNNAGW 217
Query: 277 GGRGGRGGRMAGGYGGYGGYGGGYGGILYKPLLFYELNELGIS 319
G+ G M G G+G YG Y+P N G S
Sbjct: 218 YAGWGQIGTMPYGAAATAGWGDWYGNNFYQPQAGGHHNNAGSS 260
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 46/78 (58%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
KIFVGG+SPE+ +E++ +HF Q+G + + ++ YD++ + + F F+ F L
Sbjct: 30 KIFVGGISPEVNNEDLSSHFTQYGEVSQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALAA 89
Query: 246 PKQKINDKEVDVKKATPK 263
+Q I K V+VK A +
Sbjct: 90 REQTIKGKSVEVKPAKSR 107
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 32/64 (50%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGV 503
++ + E P+DK R+NF FI FE E KQ +E DVKKA P+ + F
Sbjct: 135 KVDDIEWPFDKQTKTRRNFAFIVFEEEESADKASSQTKQTFGTRECDVKKAVPQGKRFPG 194
Query: 504 RGGR 507
GR
Sbjct: 195 AQGR 198
Score = 45.8 bits (107), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 593 KNKMVSHPGIVDKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
+NK V G+ +E EL+ HF ++G+++++ D T R FAFIVF++ ES +KA
Sbjct: 108 ENKKVFVGGLPSDYSEQELRSHFEQFGKVDDIEWPFDKQTKTRRNFAFIVFEEEESADKA 167
Query: 652 SVE 654
S +
Sbjct: 168 SSQ 170
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 27/44 (61%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
E+L HF++YGE+ +K D GRSRGFAF+ F E + A
Sbjct: 43 EDLSSHFTQYGEVSQAQVKYDRTNGRSRGFAFVEFTTGEGCKLA 86
>gi|194390332|dbj|BAG61935.1| unnamed protein product [Homo sapiens]
Length = 303
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 63/155 (40%), Positives = 99/155 (63%), Gaps = 10/155 (6%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++LK++FSK+GE+ + TLK DP TGRSRGF F++FK++ES++K V+ + H +N K
Sbjct: 59 KDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDK-----VMDQKEHKLNGK 113
Query: 174 KIEAKKAKAKS-----GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNF 228
I+ K+AKA KIFVGGLSP+ +E+I+ +F FG + E+P D ++R+ F
Sbjct: 114 VIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGF 173
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
CFITF+ E V +++ + + ++K A K
Sbjct: 174 CFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSK 208
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 39/48 (81%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
D ++LK++FSK+GE+ + TLK DP TGRSRGF F++FK++ES++K
Sbjct: 55 DTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKV 102
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 51/87 (58%)
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
KI+A K + GK+F+GGLS + +++K +F++FG +++ + D + + F F+ F
Sbjct: 34 KIDASKNEEDEGKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLF 93
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKA 260
+ V ++ + K+N K +D K+A
Sbjct: 94 KESESVDKVMDQKEHKLNGKVIDPKRA 120
Score = 43.9 bits (102), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D E+++E+F +GE+E++ L D T + RGF FI FK+ E ++K
Sbjct: 140 DTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 186
>gi|116256512|ref|NP_001070733.1| heterogeneous nuclear ribonucleoprotein D0 isoform a [Mus musculus]
gi|33516945|sp|Q60668.2|HNRPD_MOUSE RecName: Full=Heterogeneous nuclear ribonucleoprotein D0;
Short=hnRNP D0; AltName: Full=AU-rich element
RNA-binding protein 1
gi|148688367|gb|EDL20314.1| heterogeneous nuclear ribonucleoprotein D, isoform CRA_d [Mus
musculus]
Length = 355
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 63/155 (40%), Positives = 99/155 (63%), Gaps = 10/155 (6%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++LK++FSK+GE+ + TLK DP TGRSRGF F++FK++ES++K V+ + H +N K
Sbjct: 111 KDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDK-----VMDQKEHKLNGK 165
Query: 174 KIEAKKAKAKS-----GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNF 228
I+ K+AKA KIFVGGLSP+ +E+I+ +F FG + E+P D ++R+ F
Sbjct: 166 VIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGF 225
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
CFITF+ E V +++ + + ++K A K
Sbjct: 226 CFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSK 260
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 39/47 (82%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D ++LK++FSK+GE+ + TLK DP TGRSRGF F++FK++ES++K
Sbjct: 107 DTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDK 153
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 54/96 (56%)
Query: 165 EGNHVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQ 224
EG+ + + EA A+ + K+F+GGLS + +++K +F++FG +++ + D +
Sbjct: 77 EGHSNSSPRHTEAAAAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGR 136
Query: 225 RKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKA 260
+ F F+ F+ V ++ + K+N K +D K+A
Sbjct: 137 SRGFGFVLFKESESVDKVMDQKEHKLNGKVIDPKRA 172
Score = 44.3 bits (103), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D E+++E+F +GE+E++ L D T + RGF FI FK+ E ++K
Sbjct: 192 DTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 238
>gi|160333913|ref|NP_001103930.1| heterogeneous nuclear ribonucleoprotein D0 [Danio rerio]
gi|141796298|gb|AAI39675.1| Hnrnpd protein [Danio rerio]
Length = 314
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 76/190 (40%), Positives = 110/190 (57%), Gaps = 16/190 (8%)
Query: 115 ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNKK 174
+LK++F+K+GE+ + TLK DP TGRSRGF F++FK+ ES+EK VI + H +N K
Sbjct: 69 DLKDYFTKFGEVVDCTLKLDPLTGRSRGFGFVLFKEAESVEK-----VITQKEHKLNGKV 123
Query: 175 IEAKKAKAKS-----GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFC 229
I+ KKAKA KIFVGGLSP+ +E+I+ +F +G + E+P + ++R+ FC
Sbjct: 124 IDPKKAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFDAYGEVESIELPMENKTNKRRGFC 183
Query: 230 FITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGVRGGRG-----GRG-GRGGRG 283
FITF+ E V +++ I + +VK A K + + G RG GRGG
Sbjct: 184 FITFKEEEPVKKIMEKMYHNIGLSKCEVKVAMSKEQYQQQQQWGGRGGYTSRGRGRGGPN 243
Query: 284 GRMAGGYGGY 293
GYG Y
Sbjct: 244 QNWNQGYGNY 253
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 38/48 (79%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
D ++LK++F+K+GE+ + TLK DP TGRSRGF F++FK+ ES+EK
Sbjct: 64 DTTKKDLKDYFTKFGEVVDCTLKLDPLTGRSRGFGFVLFKEAESVEKV 111
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 50/87 (57%)
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
KI+A K + GK+FVGGLS + +++K +F +FG +++ + D + + F F+ F
Sbjct: 43 KIDASKNEEDEGKMFVGGLSWDTTKKDLKDYFTKFGEVVDCTLKLDPLTGRSRGFGFVLF 102
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKA 260
+ V ++ + K+N K +D KKA
Sbjct: 103 KEAESVEKVITQKEHKLNGKVIDPKKA 129
Score = 44.3 bits (103), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D E+++E+F YGE+E++ L + T + RGF FI FK+ E ++K
Sbjct: 149 DTPEEKIREYFDAYGEVESIELPMENKTNKRRGFCFITFKEEEPVKK 195
>gi|45384514|ref|NP_990659.1| heterogeneous nuclear ribonucleoprotein A/B [Gallus gallus]
gi|515838|emb|CAA56586.1| single stranded D box binding factor [Gallus gallus]
Length = 302
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 64/154 (41%), Positives = 98/154 (63%), Gaps = 9/154 (5%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++LK++F+K+GE+ + T+K DPNTGRSRGF FI+FK E SVE V+ + H ++ +
Sbjct: 104 KDLKDYFTKFGEVTDCTIKMDPNTGRSRGFGFILFK-----EPGSVEKVLEQKEHRLDGR 158
Query: 174 KIEAKKAKAKSG----KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFC 229
I+ KKA A KIFVGGL+PE +E+I+ +F +FG I E+P D ++R+ F
Sbjct: 159 LIDPKKAMAMKKDPVKKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKTNKRRGFV 218
Query: 230 FITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
FITF+ E V +L+ ++ + ++K A PK
Sbjct: 219 FITFKEEDPVKKVLEKKFHNVSGSKCEIKVAQPK 252
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 38/47 (80%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D ++LK++F+K+GE+ + T+K DPNTGRSRGF FI+FK+ S+EK
Sbjct: 100 DTSKKDLKDYFTKFGEVTDCTIKMDPNTGRSRGFGFILFKEPGSVEK 146
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 51/87 (58%)
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
+I A K + +GK+FVGGLS + +++K +F +FG + + + D + + + F FI F
Sbjct: 79 QINASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVTDCTIKMDPNTGRSRGFGFILF 138
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKA 260
+ V +L+ + +++ + +D KKA
Sbjct: 139 KEPGSVEKVLEQKEHRLDGRLIDPKKA 165
Score = 47.0 bits (110), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
G+ + TEE ++E+F ++GEIE + L DP T + RGF FI FK+ + ++K
Sbjct: 180 GLNPEATEEKIREYFGEFGEIEAIELPMDPKTNKRRGFVFITFKEEDPVKK 230
>gi|14110420|ref|NP_112738.1| heterogeneous nuclear ribonucleoprotein D0 isoform a [Homo sapiens]
gi|386782249|ref|NP_001247736.1| heterogeneous nuclear ribonucleoprotein D0 [Macaca mulatta]
gi|114594005|ref|XP_001143807.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 3
[Pan troglodytes]
gi|297673867|ref|XP_002814969.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 1
[Pongo abelii]
gi|402869391|ref|XP_003898746.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 2
[Papio anubis]
gi|13124489|sp|Q14103.1|HNRPD_HUMAN RecName: Full=Heterogeneous nuclear ribonucleoprotein D0;
Short=hnRNP D0; AltName: Full=AU-rich element
RNA-binding protein 1
gi|870749|dbj|BAA09525.1| heterogeneous nuclear ribonucleoprotein D (hnRNP D) [Homo sapiens]
gi|2815612|gb|AAC23474.1| heterogeneous nuclear ribonucleoprotein D [Homo sapiens]
gi|12803191|gb|AAH02401.1| Heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa) [Homo sapiens]
gi|63990762|gb|AAY40913.1| unknown [Homo sapiens]
gi|119626280|gb|EAX05875.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa), isoform CRA_d [Homo sapiens]
gi|119626281|gb|EAX05876.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa), isoform CRA_d [Homo sapiens]
gi|123982850|gb|ABM83166.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa) [synthetic construct]
gi|123997529|gb|ABM86366.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa) [synthetic construct]
gi|355687289|gb|EHH25873.1| Heterogeneous nuclear ribonucleoprotein D0 [Macaca mulatta]
gi|380783619|gb|AFE63685.1| heterogeneous nuclear ribonucleoprotein D0 isoform a [Macaca
mulatta]
gi|383417965|gb|AFH32196.1| heterogeneous nuclear ribonucleoprotein D0 isoform a [Macaca
mulatta]
gi|384940052|gb|AFI33631.1| heterogeneous nuclear ribonucleoprotein D0 isoform a [Macaca
mulatta]
Length = 355
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 63/155 (40%), Positives = 99/155 (63%), Gaps = 10/155 (6%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++LK++FSK+GE+ + TLK DP TGRSRGF F++FK++ES++K V+ + H +N K
Sbjct: 111 KDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDK-----VMDQKEHKLNGK 165
Query: 174 KIEAKKAKAKS-----GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNF 228
I+ K+AKA KIFVGGLSP+ +E+I+ +F FG + E+P D ++R+ F
Sbjct: 166 VIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGF 225
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
CFITF+ E V +++ + + ++K A K
Sbjct: 226 CFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSK 260
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 39/47 (82%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D ++LK++FSK+GE+ + TLK DP TGRSRGF F++FK++ES++K
Sbjct: 107 DTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDK 153
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 54/96 (56%)
Query: 165 EGNHVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQ 224
EG+ + + EA A+ + K+F+GGLS + +++K +F++FG +++ + D +
Sbjct: 77 EGHSNSSPRHSEAATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGR 136
Query: 225 RKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKA 260
+ F F+ F+ V ++ + K+N K +D K+A
Sbjct: 137 SRGFGFVLFKESESVDKVMDQKEHKLNGKVIDPKRA 172
Score = 44.3 bits (103), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D E+++E+F +GE+E++ L D T + RGF FI FK+ E ++K
Sbjct: 192 DTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 238
>gi|410351149|gb|JAA42178.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa) [Pan troglodytes]
Length = 356
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 63/155 (40%), Positives = 99/155 (63%), Gaps = 10/155 (6%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++LK++FSK+GE+ + TLK DP TGRSRGF F++FK++ES++K V+ + H +N K
Sbjct: 112 KDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDK-----VMDQKEHKLNGK 166
Query: 174 KIEAKKAKAKS-----GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNF 228
I+ K+AKA KIFVGGLSP+ +E+I+ +F FG + E+P D ++R+ F
Sbjct: 167 VIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGF 226
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
CFITF+ E V +++ + + ++K A K
Sbjct: 227 CFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSK 261
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 39/47 (82%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D ++LK++FSK+GE+ + TLK DP TGRSRGF F++FK++ES++K
Sbjct: 108 DTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDK 154
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 54/96 (56%)
Query: 165 EGNHVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQ 224
EG+ + + EA A+ + K+F+GGLS + +++K +F++FG +++ + D +
Sbjct: 78 EGHSNSSPRHSEAATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGR 137
Query: 225 RKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKA 260
+ F F+ F+ V ++ + K+N K +D K+A
Sbjct: 138 SRGFGFVLFKESESVDKVMDQKEHKLNGKVIDPKRA 173
Score = 44.3 bits (103), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D E+++E+F +GE+E++ L D T + RGF FI FK+ E ++K
Sbjct: 193 DTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 239
>gi|397524667|ref|XP_003832310.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein D0 [Pan paniscus]
Length = 355
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 63/155 (40%), Positives = 99/155 (63%), Gaps = 10/155 (6%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++LK++FSK+GE+ + TLK DP TGRSRGF F++FK++ES++K V+ + H +N K
Sbjct: 111 KDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDK-----VMDQKEHKLNGK 165
Query: 174 KIEAKKAKAKS-----GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNF 228
I+ K+AKA KIFVGGLSP+ +E+I+ +F FG + E+P D ++R+ F
Sbjct: 166 VIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGF 225
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
CFITF+ E V +++ + + ++K A K
Sbjct: 226 CFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSK 260
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 39/47 (82%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D ++LK++FSK+GE+ + TLK DP TGRSRGF F++FK++ES++K
Sbjct: 107 DTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDK 153
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 54/96 (56%)
Query: 165 EGNHVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQ 224
EG+ + + EA A+ + K+F+GGLS + +++K +F++FG +++ + D +
Sbjct: 77 EGHSNSSPRHSEAATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGR 136
Query: 225 RKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKA 260
+ F F+ F+ V ++ + K+N K +D K+A
Sbjct: 137 SRGFGFVLFKESESVDKVMDQKEHKLNGKVIDPKRA 172
Score = 44.3 bits (103), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D E+++E+F +GE+E++ L D T + RGF FI FK+ E ++K
Sbjct: 192 DTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 238
>gi|345327974|ref|XP_001505245.2| PREDICTED: heterogeneous nuclear ribonucleoprotein D0-like
[Ornithorhynchus anatinus]
Length = 306
Score = 119 bits (298), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 63/155 (40%), Positives = 98/155 (63%), Gaps = 10/155 (6%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++LK++FSK+GE+ + TLK DP TGRSRGF F++FK+ ES++K V+ + H +N K
Sbjct: 62 KDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKEAESVDK-----VMDQKEHKLNGK 116
Query: 174 KIEAKKAKAKS-----GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNF 228
I+ K+AKA KIFVGGLSP+ +E+I+ +F FG + E+P D ++R+ F
Sbjct: 117 VIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGF 176
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
CFITF+ E V +++ + + ++K A K
Sbjct: 177 CFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSK 211
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 38/48 (79%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
D ++LK++FSK+GE+ + TLK DP TGRSRGF F++FK+ ES++K
Sbjct: 58 DTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKEAESVDKV 105
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 49/85 (57%)
Query: 176 EAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEH 235
EA A+ + K+F+GGLS + +++K +F++FG +++ + D + + F F+ F+
Sbjct: 39 EAATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKE 98
Query: 236 ESVVIDLLKNPKQKINDKEVDVKKA 260
V ++ + K+N K +D K+A
Sbjct: 99 AESVDKVMDQKEHKLNGKVIDPKRA 123
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D E+++E+F +GE+E++ L D T + RGF FI FK+ E ++K
Sbjct: 143 DTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 189
>gi|410957357|ref|XP_003985295.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0, partial
[Felis catus]
Length = 290
Score = 119 bits (298), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 63/155 (40%), Positives = 99/155 (63%), Gaps = 10/155 (6%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++LK++FSK+GE+ + TLK DP TGRSRGF F++FK++ES++K V+ + H +N K
Sbjct: 46 KDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDK-----VMDQKEHKLNGK 100
Query: 174 KIEAKKAKAKS-----GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNF 228
I+ K+AKA KIFVGGLSP+ +E+I+ +F FG + E+P D ++R+ F
Sbjct: 101 VIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGF 160
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
CFITF+ E V +++ + + ++K A K
Sbjct: 161 CFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSK 195
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 39/48 (81%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
D ++LK++FSK+GE+ + TLK DP TGRSRGF F++FK++ES++K
Sbjct: 42 DTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKV 89
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 54/96 (56%)
Query: 165 EGNHVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQ 224
EG+ + + EA A+ + K+F+GGLS + +++K +F++FG +++ + D +
Sbjct: 12 EGHSNSSPRHSEAATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGR 71
Query: 225 RKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKA 260
+ F F+ F+ V ++ + K+N K +D K+A
Sbjct: 72 SRGFGFVLFKESESVDKVMDQKEHKLNGKVIDPKRA 107
Score = 44.3 bits (103), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D E+++E+F +GE+E++ L D T + RGF FI FK+ E ++K
Sbjct: 127 DTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 173
>gi|395834193|ref|XP_003790096.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 2
[Otolemur garnettii]
Length = 355
Score = 119 bits (298), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 63/155 (40%), Positives = 99/155 (63%), Gaps = 10/155 (6%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++LK++FSK+GE+ + TLK DP TGRSRGF F++FK++ES++K V+ + H +N K
Sbjct: 111 KDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDK-----VMDQKEHKLNGK 165
Query: 174 KIEAKKAKAKS-----GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNF 228
I+ K+AKA KIFVGGLSP+ +E+I+ +F FG + E+P D ++R+ F
Sbjct: 166 VIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGF 225
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
CFITF+ E V +++ + + ++K A K
Sbjct: 226 CFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSK 260
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 39/47 (82%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D ++LK++FSK+GE+ + TLK DP TGRSRGF F++FK++ES++K
Sbjct: 107 DTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDK 153
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 54/96 (56%)
Query: 165 EGNHVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQ 224
EG+ + + EA A+ + K+F+GGLS + +++K +F++FG +++ + D +
Sbjct: 77 EGHSNSSPRHSEAATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGR 136
Query: 225 RKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKA 260
+ F F+ F+ V ++ + K+N K +D K+A
Sbjct: 137 SRGFGFVLFKESESVDKVMDQKEHKLNGKVIDPKRA 172
Score = 43.9 bits (102), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D E+++E+F +GE+E++ L D T + RGF FI FK+ E ++K
Sbjct: 192 DTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 238
>gi|334330945|ref|XP_001364005.2| PREDICTED: heterogeneous nuclear ribonucleoprotein D0-like
[Monodelphis domestica]
Length = 376
Score = 119 bits (298), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 63/155 (40%), Positives = 99/155 (63%), Gaps = 10/155 (6%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++LK++FSK+GE+ + TLK DP TGRSRGF F++FK++ES++K V+ + H +N K
Sbjct: 132 KDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDK-----VMDQKEHKLNGK 186
Query: 174 KIEAKKAKAKS-----GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNF 228
I+ K+AKA KIFVGGLSP+ +E+I+ +F FG + E+P D ++R+ F
Sbjct: 187 VIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGF 246
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
CFITF+ E V +++ + + ++K A K
Sbjct: 247 CFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSK 281
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 39/47 (82%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D ++LK++FSK+GE+ + TLK DP TGRSRGF F++FK++ES++K
Sbjct: 128 DTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDK 174
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 54/96 (56%)
Query: 165 EGNHVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQ 224
EG+ + + EA A+ + K+F+GGLS + +++K +F++FG +++ + D +
Sbjct: 98 EGHSNSSPRHSEAATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGR 157
Query: 225 RKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKA 260
+ F F+ F+ V ++ + K+N K +D K+A
Sbjct: 158 SRGFGFVLFKESESVDKVMDQKEHKLNGKVIDPKRA 193
Score = 43.9 bits (102), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D E+++E+F +GE+E++ L D T + RGF FI FK+ E ++K
Sbjct: 213 DTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 259
>gi|332233349|ref|XP_003265864.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein D0 [Nomascus leucogenys]
Length = 355
Score = 119 bits (298), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 63/155 (40%), Positives = 99/155 (63%), Gaps = 10/155 (6%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++LK++FSK+GE+ + TLK DP TGRSRGF F++FK++ES++K V+ + H +N K
Sbjct: 111 KDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDK-----VMDQKEHKLNGK 165
Query: 174 KIEAKKAKAKS-----GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNF 228
I+ K+AKA KIFVGGLSP+ +E+I+ +F FG + E+P D ++R+ F
Sbjct: 166 VIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGF 225
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
CFITF+ E V +++ + + ++K A K
Sbjct: 226 CFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSK 260
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 39/47 (82%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D ++LK++FSK+GE+ + TLK DP TGRSRGF F++FK++ES++K
Sbjct: 107 DTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDK 153
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 54/96 (56%)
Query: 165 EGNHVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQ 224
EG+ + + EA A+ + K+F+GGLS + +++K +F++FG +++ + D +
Sbjct: 77 EGHSNSSPRHSEAATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGR 136
Query: 225 RKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKA 260
+ F F+ F+ V ++ + K+N K +D K+A
Sbjct: 137 SRGFGFVLFKESESVDKVMDQKEHKLNGKVIDPKRA 172
Score = 43.9 bits (102), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D E+++E+F +GE+E++ L D T + RGF FI FK+ E ++K
Sbjct: 192 DTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 238
>gi|211826253|gb|AAH11172.2| Hnrnpd protein [Mus musculus]
Length = 351
Score = 119 bits (298), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 63/155 (40%), Positives = 99/155 (63%), Gaps = 10/155 (6%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++LK++FSK+GE+ + TLK DP TGRSRGF F++FK++ES++K V+ + H +N K
Sbjct: 107 KDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDK-----VMDQKEHKLNGK 161
Query: 174 KIEAKKAKAKS-----GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNF 228
I+ K+AKA KIFVGGLSP+ +E+I+ +F FG + E+P D ++R+ F
Sbjct: 162 VIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGF 221
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
CFITF+ E V +++ + + ++K A K
Sbjct: 222 CFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSK 256
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 39/47 (82%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D ++LK++FSK+GE+ + TLK DP TGRSRGF F++FK++ES++K
Sbjct: 103 DTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDK 149
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 54/96 (56%)
Query: 165 EGNHVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQ 224
EG+ + + EA A+ + K+F+GGLS + +++K +F++FG +++ + D +
Sbjct: 73 EGHSNSSPRHTEAAAAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGR 132
Query: 225 RKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKA 260
+ F F+ F+ V ++ + K+N K +D K+A
Sbjct: 133 SRGFGFVLFKESESVDKVMDQKEHKLNGKVIDPKRA 168
Score = 44.3 bits (103), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D E+++E+F +GE+E++ L D T + RGF FI FK+ E ++K
Sbjct: 188 DTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 234
>gi|148878011|gb|AAI46039.1| HNRNPD protein [Bos taurus]
Length = 355
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 63/155 (40%), Positives = 99/155 (63%), Gaps = 10/155 (6%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++LK++FSK+GE+ + TLK DP TGRSRGF F++FK++ES++K V+ + H +N K
Sbjct: 111 KDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDK-----VMDQKEHKLNGK 165
Query: 174 KIEAKKAKAKS-----GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNF 228
I+ K+AKA KIFVGGLSP+ +E+I+ +F FG + E+P D ++R+ F
Sbjct: 166 VIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGF 225
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
CFITF+ E V +++ + + ++K A K
Sbjct: 226 CFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSK 260
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 39/47 (82%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D ++LK++FSK+GE+ + TLK DP TGRSRGF F++FK++ES++K
Sbjct: 107 DTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDK 153
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 54/96 (56%)
Query: 165 EGNHVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQ 224
EG+ + + EA A+ + K+F+GGLS + +++K +F++FG +++ + D +
Sbjct: 77 EGHSNSSPRHSEAATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGR 136
Query: 225 RKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKA 260
+ F F+ F+ V ++ + K+N K +D K+A
Sbjct: 137 SRGFGFVLFKESESVDKVMDQKEHKLNGKVIDPKRA 172
Score = 43.9 bits (102), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D E+++E+F +GE+E++ L D T + RGF FI FK+ E ++K
Sbjct: 192 DTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 238
>gi|403263354|ref|XP_003924002.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 3
[Saimiri boliviensis boliviensis]
Length = 336
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 63/155 (40%), Positives = 99/155 (63%), Gaps = 10/155 (6%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++LK++FSK+GE+ + TLK DP TGRSRGF F++FK++ES++K V+ + H +N K
Sbjct: 92 KDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDK-----VMDQKEHKLNGK 146
Query: 174 KIEAKKAKAKS-----GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNF 228
I+ K+AKA KIFVGGLSP+ +E+I+ +F FG + E+P D ++R+ F
Sbjct: 147 VIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGF 206
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
CFITF+ E V +++ + + ++K A K
Sbjct: 207 CFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSK 241
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 39/48 (81%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
D ++LK++FSK+GE+ + TLK DP TGRSRGF F++FK++ES++K
Sbjct: 88 DTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKV 135
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 51/87 (58%)
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
KI+A K + GK+F+GGLS + +++K +F++FG +++ + D + + F F+ F
Sbjct: 67 KIDASKNEEDEGKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLF 126
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKA 260
+ V ++ + K+N K +D K+A
Sbjct: 127 KESESVDKVMDQKEHKLNGKVIDPKRA 153
Score = 43.9 bits (102), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D E+++E+F +GE+E++ L D T + RGF FI FK+ E ++K
Sbjct: 173 DTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 219
>gi|74001707|ref|XP_535627.2| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 1
[Canis lupus familiaris]
Length = 336
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 63/155 (40%), Positives = 99/155 (63%), Gaps = 10/155 (6%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++LK++FSK+GE+ + TLK DP TGRSRGF F++FK++ES++K V+ + H +N K
Sbjct: 92 KDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDK-----VMDQKEHKLNGK 146
Query: 174 KIEAKKAKAKS-----GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNF 228
I+ K+AKA KIFVGGLSP+ +E+I+ +F FG + E+P D ++R+ F
Sbjct: 147 VIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGF 206
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
CFITF+ E V +++ + + ++K A K
Sbjct: 207 CFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSK 241
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 39/48 (81%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
D ++LK++FSK+GE+ + TLK DP TGRSRGF F++FK++ES++K
Sbjct: 88 DTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKV 135
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 51/87 (58%)
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
KI+A K + GK+F+GGLS + +++K +F++FG +++ + D + + F F+ F
Sbjct: 67 KIDASKNEEDEGKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLF 126
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKA 260
+ V ++ + K+N K +D K+A
Sbjct: 127 KESESVDKVMDQKEHKLNGKVIDPKRA 153
Score = 43.9 bits (102), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D E+++E+F +GE+E++ L D T + RGF FI FK+ E ++K
Sbjct: 173 DTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 219
>gi|403263352|ref|XP_003924001.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 2
[Saimiri boliviensis boliviensis]
Length = 355
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 63/155 (40%), Positives = 99/155 (63%), Gaps = 10/155 (6%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++LK++FSK+GE+ + TLK DP TGRSRGF F++FK++ES++K V+ + H +N K
Sbjct: 111 KDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDK-----VMDQKEHKLNGK 165
Query: 174 KIEAKKAKAKS-----GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNF 228
I+ K+AKA KIFVGGLSP+ +E+I+ +F FG + E+P D ++R+ F
Sbjct: 166 VIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGF 225
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
CFITF+ E V +++ + + ++K A K
Sbjct: 226 CFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSK 260
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 39/47 (82%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D ++LK++FSK+GE+ + TLK DP TGRSRGF F++FK++ES++K
Sbjct: 107 DTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDK 153
Score = 52.4 bits (124), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 54/96 (56%)
Query: 165 EGNHVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQ 224
EG+ + + EA A+ + K+F+GGLS + +++K +F++FG +++ + D +
Sbjct: 77 EGHSNSSPRHTEAATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGR 136
Query: 225 RKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKA 260
+ F F+ F+ V ++ + K+N K +D K+A
Sbjct: 137 SRGFGFVLFKESESVDKVMDQKEHKLNGKVIDPKRA 172
Score = 43.9 bits (102), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D E+++E+F +GE+E++ L D T + RGF FI FK+ E ++K
Sbjct: 192 DTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 238
>gi|444723247|gb|ELW63906.1| Heterogeneous nuclear ribonucleoprotein D0, partial [Tupaia
chinensis]
Length = 296
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 63/155 (40%), Positives = 99/155 (63%), Gaps = 10/155 (6%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++LK++FSK+GE+ + TLK DP TGRSRGF F++FK++ES++K V+ + H +N K
Sbjct: 64 KDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDK-----VMDQKEHKLNGK 118
Query: 174 KIEAKKAKAKS-----GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNF 228
I+ K+AKA KIFVGGLSP+ +E+I+ +F FG + E+P D ++R+ F
Sbjct: 119 VIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGF 178
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
CFITF+ E V +++ + + ++K A K
Sbjct: 179 CFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSK 213
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 39/47 (82%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D ++LK++FSK+GE+ + TLK DP TGRSRGF F++FK++ES++K
Sbjct: 60 DTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDK 106
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 54/96 (56%)
Query: 165 EGNHVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQ 224
EG+ + + EA A+ + K+F+GGLS + +++K +F++FG +++ + D +
Sbjct: 30 EGHSNSSPRHTEAATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGR 89
Query: 225 RKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKA 260
+ F F+ F+ V ++ + K+N K +D K+A
Sbjct: 90 SRGFGFVLFKESESVDKVMDQKEHKLNGKVIDPKRA 125
Score = 43.9 bits (102), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D E+++E+F +GE+E++ L D T + RGF FI FK+ E ++K
Sbjct: 145 DTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 191
>gi|395505200|ref|XP_003756932.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B [Sarcophilus
harrisii]
Length = 278
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 63/154 (40%), Positives = 97/154 (62%), Gaps = 9/154 (5%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++LK++F+K+GE+ + T+K DPNTGRSRGF FI+FK E ASV+ V+ + H ++ +
Sbjct: 13 KDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFK-----ESASVDKVLDQKEHRLDGR 67
Query: 174 KIEAKKAKAKSG----KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFC 229
I+ KKA A KIFVGGL+PE +++I+ +F FG I E+P D ++R+ F
Sbjct: 68 VIDPKKAMAMKKDPVKKIFVGGLNPEATEDKIREYFGDFGEIESIELPMDPKTNKRRGFV 127
Query: 230 FITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
FITF+ E V +L+ + + ++K A PK
Sbjct: 128 FITFKEEDPVKKILEKKFHNVGGSKCEIKVAQPK 161
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 39/48 (81%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
D ++LK++F+K+GE+ + T+K DPNTGRSRGF FI+FK++ S++K
Sbjct: 9 DTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKESASVDKV 56
Score = 47.0 bits (110), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 44/74 (59%)
Query: 187 IFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNP 246
+FVGGLS + +++K +F +FG +++ + D + + + F FI F+ + V +L
Sbjct: 1 MFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKESASVDKVLDQK 60
Query: 247 KQKINDKEVDVKKA 260
+ +++ + +D KKA
Sbjct: 61 EHRLDGRVIDPKKA 74
Score = 46.2 bits (108), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 31/43 (72%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
++++E+F +GEIE++ L DP T + RGF FI FK+ + ++K
Sbjct: 97 DKIREYFGDFGEIESIELPMDPKTNKRRGFVFITFKEEDPVKK 139
>gi|431916163|gb|ELK16415.1| Heterogeneous nuclear ribonucleoprotein D0 [Pteropus alecto]
Length = 334
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 63/155 (40%), Positives = 99/155 (63%), Gaps = 10/155 (6%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++LK++FSK+GE+ + TLK DP TGRSRGF F++FK++ES++K V+ + H +N K
Sbjct: 92 KDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDK-----VMDQKEHKLNGK 146
Query: 174 KIEAKKAKAKS-----GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNF 228
I+ K+AKA KIFVGGLSP+ +E+I+ +F FG + E+P D ++R+ F
Sbjct: 147 VIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGF 206
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
CFITF+ E V +++ + + ++K A K
Sbjct: 207 CFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSK 241
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 39/48 (81%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
D ++LK++FSK+GE+ + TLK DP TGRSRGF F++FK++ES++K
Sbjct: 88 DTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKV 135
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 51/87 (58%)
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
KI+A K + GK+F+GGLS + +++K +F++FG +++ + D + + F F+ F
Sbjct: 67 KIDASKNEEDEGKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLF 126
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKA 260
+ V ++ + K+N K +D K+A
Sbjct: 127 KESESVDKVMDQKEHKLNGKVIDPKRA 153
Score = 43.9 bits (102), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D E+++E+F +GE+E++ L D T + RGF FI FK+ E ++K
Sbjct: 173 DTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 219
>gi|345777448|ref|XP_003431598.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B [Canis lupus
familiaris]
Length = 353
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 61/134 (45%), Positives = 89/134 (66%), Gaps = 9/134 (6%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++LK++F+K+GE+ + T+K DPNTGRSRGF FI+FKD ASVE V+ + H ++ +
Sbjct: 134 KDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDA-----ASVEKVLDQKEHRLDGR 188
Query: 174 KIEAKKAKAKS----GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFC 229
I+ KKA A KIFVGGL+PE +E+I+ +F +FG I E+P D ++R+ F
Sbjct: 189 VIDPKKAMAMKKDPVKKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKSNKRRGFV 248
Query: 230 FITFEHESVVIDLL 243
FITF+ E V +L
Sbjct: 249 FITFKEEEPVKKVL 262
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 38/47 (80%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D ++LK++F+K+GE+ + T+K DPNTGRSRGF FI+FKD S+EK
Sbjct: 130 DTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEK 176
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 45/75 (60%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+FVGGLS + +++K +F +FG +++ + D + + + F FI F+ + V +L
Sbjct: 121 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQ 180
Query: 246 PKQKINDKEVDVKKA 260
+ +++ + +D KKA
Sbjct: 181 KEHRLDGRVIDPKKA 195
Score = 47.4 bits (111), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
G+ + TEE ++E+F ++GEIE + L DP + + RGF FI FK+ E ++K
Sbjct: 210 GLNPEATEEKIREYFGEFGEIEAIELPMDPKSNKRRGFVFITFKEEEPVKK 260
>gi|417409403|gb|JAA51208.1| Putative rna-binding protein musashi/mrna cleavage and
polyadenylation factor i complex subunit hrp1, partial
[Desmodus rotundus]
Length = 292
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 67/154 (43%), Positives = 95/154 (61%), Gaps = 10/154 (6%)
Query: 115 ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNKK 174
+LK++FSK+GE+ + T+K DPNTGRSRGF FI+FKD ASVE V+ + H ++ +
Sbjct: 45 DLKDYFSKFGEVVDCTIKMDPNTGRSRGFGFILFKDA-----ASVEKVLDQKEHRLDGRV 99
Query: 175 IEAKKAKAKS----GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCF 230
I+ KKA A KIFVGGL+PE +EEI+ +F +FG I ++P D +R+ F F
Sbjct: 100 IDPKKAMAMKKEPVKKIFVGGLNPEATEEEIREYFGEFGEIEAIDLPMDPKSHKRRGFVF 159
Query: 231 ITF-EHESVVIDLLKNPKQKINDKEVDVKKATPK 263
ITF E E V L+ I + ++K A P+
Sbjct: 160 ITFKEEEEPVRKALEKKFHTIGASKCEIKVALPR 193
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/47 (59%), Positives = 37/47 (78%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D +LK++FSK+GE+ + T+K DPNTGRSRGF FI+FKD S+EK
Sbjct: 40 DTSKNDLKDYFSKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEK 86
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 60/110 (54%), Gaps = 7/110 (6%)
Query: 158 SVEDVIAEGNHVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMP 217
+V AEG+ I A + + +GK+FVGGLS + ++K +F++FG +++ +
Sbjct: 9 AVNQTSAEGDQ------INASRTEDDAGKMFVGGLSWDTSKNDLKDYFSKFGEVVDCTIK 62
Query: 218 YDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATP-KPEP 266
D + + + F FI F+ + V +L + +++ + +D KKA K EP
Sbjct: 63 MDPNTGRSRGFGFILFKDAASVEKVLDQKEHRLDGRVIDPKKAMAMKKEP 112
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 38/67 (56%), Gaps = 4/67 (5%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
EE++E+F ++GEIE + L DP + + RGF FI FK+ E + ++E H I
Sbjct: 128 EEIREYFGEFGEIEAIDLPMDPKSHKRRGFVFITFKEEEEPVRKALEKKF----HTIGAS 183
Query: 174 KIEAKKA 180
K E K A
Sbjct: 184 KCEIKVA 190
Score = 47.0 bits (110), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 33/50 (66%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVY 657
EE++E+F ++GEIE + L DP + + RGF FI FK+ E + ++E +
Sbjct: 128 EEIREYFGEFGEIEAIDLPMDPKSHKRRGFVFITFKEEEEPVRKALEKKF 177
>gi|74001715|ref|XP_857957.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 11
[Canis lupus familiaris]
Length = 355
Score = 119 bits (297), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 63/155 (40%), Positives = 99/155 (63%), Gaps = 10/155 (6%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++LK++FSK+GE+ + TLK DP TGRSRGF F++FK++ES++K V+ + H +N K
Sbjct: 111 KDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDK-----VMDQKEHKLNGK 165
Query: 174 KIEAKKAKAKS-----GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNF 228
I+ K+AKA KIFVGGLSP+ +E+I+ +F FG + E+P D ++R+ F
Sbjct: 166 VIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGF 225
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
CFITF+ E V +++ + + ++K A K
Sbjct: 226 CFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSK 260
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 39/47 (82%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D ++LK++FSK+GE+ + TLK DP TGRSRGF F++FK++ES++K
Sbjct: 107 DTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDK 153
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 54/96 (56%)
Query: 165 EGNHVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQ 224
EG+ + + EA A+ + K+F+GGLS + +++K +F++FG +++ + D +
Sbjct: 77 EGHSNSSPRHSEAATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGR 136
Query: 225 RKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKA 260
+ F F+ F+ V ++ + K+N K +D K+A
Sbjct: 137 SRGFGFVLFKESESVDKVMDQKEHKLNGKVIDPKRA 172
Score = 43.9 bits (102), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D E+++E+F +GE+E++ L D T + RGF FI FK+ E ++K
Sbjct: 192 DTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 238
>gi|444721584|gb|ELW62314.1| Heterogeneous nuclear ribonucleoprotein D-like protein [Tupaia
chinensis]
Length = 301
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 64/155 (41%), Positives = 96/155 (61%), Gaps = 10/155 (6%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++L E+ S++GE+ + T+K+D TGRSRGF F++FKD ASV+ V+ H ++ K
Sbjct: 43 KDLTEYLSRFGEVVDCTIKTDTVTGRSRGFGFVLFKDA-----ASVDKVLELKEHKLDGK 97
Query: 174 KIEAKKAKAKSGK-----IFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNF 228
I ++AKA GK +FVGGLSP+ +E+IK +F FG I E+P D ++R+ F
Sbjct: 98 LIGPQRAKALKGKEPPKKVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGF 157
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
CFIT+ E V LL++ +I + +VK A PK
Sbjct: 158 CFITYTDEEPVKKLLESRCHQIGSGKCEVKIAQPK 192
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 35/47 (74%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D ++L E+ S++GE+ + T+K+D TGRSRGF F++FKD S++K
Sbjct: 39 DTSKKDLTEYLSRFGEVVDCTIKTDTVTGRSRGFGFVLFKDAASVDK 85
Score = 47.4 bits (111), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 50/87 (57%)
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
KI+A K + GK+F+GGLS + +++ + ++FG +++ + D + + F F+ F
Sbjct: 18 KIKASKNQQDDGKLFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDTVTGRSRGFGFVLF 77
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKA 260
+ + V +L+ + K++ K + ++A
Sbjct: 78 KDAASVDKVLELKEHKLDGKLIGPQRA 104
Score = 47.0 bits (110), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D E++KE+F +GEIEN+ L D T RGF FI + D E ++K
Sbjct: 124 DTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPVKK 170
Score = 42.4 bits (98), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 497
EI E+P D ++R+ FCFIT+ E V LL++ +I + +VK A PK
Sbjct: 139 EIENIELPMDTKTNERRGFCFITYTDEEPVKKLLESRCHQIGSGKCEVKIAQPK 192
>gi|390608549|dbj|BAM21251.1| musashi homolog protein [Ephydatia fluviatilis]
Length = 362
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 63/172 (36%), Positives = 100/172 (58%), Gaps = 20/172 (11%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + TE+ LK++FSKYGE+ + + DP T R RGF F+ F D +ASVE+V+
Sbjct: 18 GLSWETTEDGLKQYFSKYGEVSDCVIMQDPMTKRPRGFGFVTFTD-----QASVEEVMKN 72
Query: 166 GNHVINNKKIEAKKAKAKSG--------------KIFVGGLSPEMKDEEIKAHFAQFGNI 211
G H ++NK I+ K A KS K+FVGG++ ++++++ F QFG +
Sbjct: 73 GPHTLDNKTIDPKPATMKSATPPSQGGSFNGRVKKVFVGGIAAGTTEDDVRSFFGQFGPV 132
Query: 212 IETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
E ++ +DK+ + + F F+ F+ E VV L + +IN K V+VKKA P+
Sbjct: 133 TEIDLKFDKATQRMRGFGFVGFDSEDVVDRLCQIHFHQINGKTVEVKKAEPR 184
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 52/86 (60%)
Query: 178 KKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHES 237
+ A + GKIFVGGLS E ++ +K +F+++G + + + D + + F F+TF ++
Sbjct: 5 QAASIEPGKIFVGGLSWETTEDGLKQYFSKYGEVSDCVIMQDPMTKRPRGFGFVTFTDQA 64
Query: 238 VVIDLLKNPKQKINDKEVDVKKATPK 263
V +++KN +++K +D K AT K
Sbjct: 65 SVEEVMKNGPHTLDNKTIDPKPATMK 90
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
G+ + TE+ LK++FSKYGE+ + + DP T R RGF F+ F D S+E+
Sbjct: 18 GLSWETTEDGLKQYFSKYGEVSDCVIMQDPMTKRPRGFGFVTFTDQASVEE 68
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 32/53 (60%)
Query: 445 IIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 497
+ E ++ +DK+ + + F F+ F+ E VV L + +IN K V+VKKA P+
Sbjct: 132 VTEIDLKFDKATQRMRGFGFVGFDSEDVVDRLCQIHFHQINGKTVEVKKAEPR 184
>gi|127139089|ref|NP_001076008.1| heterogeneous nuclear ribonucleoprotein D0 isoform b [Rattus
norvegicus]
gi|149046818|gb|EDL99592.1| heterogeneous nuclear ribonucleoprotein D, isoform CRA_c [Rattus
norvegicus]
gi|149046819|gb|EDL99593.1| heterogeneous nuclear ribonucleoprotein D, isoform CRA_c [Rattus
norvegicus]
Length = 334
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 62/155 (40%), Positives = 99/155 (63%), Gaps = 10/155 (6%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++LK++FSK+G++ + TLK DP TGRSRGF F++FK++ES++K V+ + H +N K
Sbjct: 90 KDLKDYFSKFGDVVDCTLKLDPITGRSRGFGFVLFKESESVDK-----VMDQKEHKLNGK 144
Query: 174 KIEAKKAKAKS-----GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNF 228
I+ K+AKA KIFVGGLSP+ +E+I+ +F FG + E+P D ++R+ F
Sbjct: 145 VIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGF 204
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
CFITF+ E V +++ + + ++K A K
Sbjct: 205 CFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSK 239
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 39/48 (81%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
D ++LK++FSK+G++ + TLK DP TGRSRGF F++FK++ES++K
Sbjct: 86 DTTKKDLKDYFSKFGDVVDCTLKLDPITGRSRGFGFVLFKESESVDKV 133
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 52/87 (59%)
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
KI+A K + GK+F+GGLS + +++K +F++FG++++ + D + + F F+ F
Sbjct: 65 KIDASKNEEDEGKMFIGGLSWDTTKKDLKDYFSKFGDVVDCTLKLDPITGRSRGFGFVLF 124
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKA 260
+ V ++ + K+N K +D K+A
Sbjct: 125 KESESVDKVMDQKEHKLNGKVIDPKRA 151
Score = 43.9 bits (102), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D E+++E+F +GE+E++ L D T + RGF FI FK+ E ++K
Sbjct: 171 DTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 217
>gi|9588098|dbj|BAB03466.1| RNA binding protein p42 AUF1 [Rattus norvegicus]
Length = 334
Score = 118 bits (296), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 62/155 (40%), Positives = 99/155 (63%), Gaps = 10/155 (6%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++LK++FSK+G++ + TLK DP TGRSRGF F++FK++ES++K V+ + H +N K
Sbjct: 90 KDLKDYFSKFGDVVDCTLKLDPITGRSRGFGFVLFKESESVDK-----VMDQKEHKLNGK 144
Query: 174 KIEAKKAKAKS-----GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNF 228
I+ K+AKA KIFVGGLSP+ +E+I+ +F FG + E+P D ++R+ F
Sbjct: 145 VIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGF 204
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
CFITF+ E V +++ + + ++K A K
Sbjct: 205 CFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSK 239
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 39/48 (81%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
D ++LK++FSK+G++ + TLK DP TGRSRGF F++FK++ES++K
Sbjct: 86 DTTKKDLKDYFSKFGDVVDCTLKLDPITGRSRGFGFVLFKESESVDKV 133
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 52/87 (59%)
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
KI+A K + GK+F+GGLS + +++K +F++FG++++ + D + + F F+ F
Sbjct: 65 KIDASKNEEDEGKMFIGGLSWDTTKKDLKDYFSKFGDVVDCTLKLDPITGRSRGFGFVLF 124
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKA 260
+ V ++ + K+N K +D K+A
Sbjct: 125 KESESVDKVMDQKEHKLNGKVIDPKRA 151
Score = 43.9 bits (102), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D E+++E+F +GE+E++ L D T + RGF FI FK+ E ++K
Sbjct: 171 DTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 217
>gi|198433300|ref|XP_002128655.1| PREDICTED: similar to heterogeneous nuclear ribonucleoprotein A/B
[Ciona intestinalis]
Length = 367
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 58/152 (38%), Positives = 101/152 (66%), Gaps = 7/152 (4%)
Query: 116 LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNKKI 175
L+E+FSK+G +++ T+K D T RSRGF F++F D E+++K V+ NH ++ +KI
Sbjct: 132 LREYFSKFGVVKDCTIKKDSKTERSRGFGFVLFDDAETVKK-----VLESENHYLDGRKI 186
Query: 176 EAKKAKA--KSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
+ KKA+A + GK+FVGG++P+ +++ +K +F Q+G I E E P DK+ + + FCFIT+
Sbjct: 187 DPKKAQAQRRDGKLFVGGINPDTENDVVKEYFTQYGEIEEFERPVDKNTGKNRGFCFITY 246
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKATPKPE 265
+ + + + Q++ ++DVK+A P+ E
Sbjct: 247 KKDGCIKLATASKTQELEGSKIDVKEAQPQVE 278
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 32/41 (78%)
Query: 610 LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
L+E+FSK+G +++ T+K D T RSRGF F++F D E+++K
Sbjct: 132 LREYFSKFGVVKDCTIKKDSKTERSRGFGFVLFDDAETVKK 172
Score = 43.5 bits (101), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 25/34 (73%)
Query: 610 LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFK 643
+KE+F++YGEIE D NTG++RGF FI +K
Sbjct: 214 VKEYFTQYGEIEEFERPVDKNTGKNRGFCFITYK 247
Score = 39.7 bits (91), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 33/56 (58%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE 499
EI E E P DK+ + + FCFIT++ + + + Q++ ++DVK+A P+ E
Sbjct: 223 EIEEFERPVDKNTGKNRGFCFITYKKDGCIKLATASKTQELEGSKIDVKEAQPQVE 278
Score = 39.3 bits (90), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 43/75 (57%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+FVGGLS + + ++ +F++FG + + + D + + F F+ F+ V +L++
Sbjct: 117 KMFVGGLSWDTETVGLREYFSKFGVVKDCTIKKDSKTERSRGFGFVLFDDAETVKKVLES 176
Query: 246 PKQKINDKEVDVKKA 260
++ +++D KKA
Sbjct: 177 ENHYLDGRKIDPKKA 191
>gi|417409283|gb|JAA51156.1| Putative rna-binding protein musashi/mrna cleavage and
polyadenylation factor i complex subunit hrp1, partial
[Desmodus rotundus]
Length = 279
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/155 (41%), Positives = 101/155 (65%), Gaps = 11/155 (7%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++LK++FSK+GE+ + TLK DP TGRSRGF F++FK++ES++K V+ + H +N K
Sbjct: 36 KDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDK-----VMDQKEHKLNGK 90
Query: 174 KIEAKKAKAKS-----GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNF 228
I+ K+AKA KIFVGGLSP+ +E+I+ +F FG + E+P DK+ ++R+ F
Sbjct: 91 VIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDKT-NKRRGF 149
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
CFITF+ E V +++ + + ++K A K
Sbjct: 150 CFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSK 184
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 39/48 (81%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
D ++LK++FSK+GE+ + TLK DP TGRSRGF F++FK++ES++K
Sbjct: 32 DTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKV 79
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 49/85 (57%)
Query: 176 EAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEH 235
EA A+ + K+F+GGLS + +++K +F++FG +++ + D + + F F+ F+
Sbjct: 13 EAAAAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKE 72
Query: 236 ESVVIDLLKNPKQKINDKEVDVKKA 260
V ++ + K+N K +D K+A
Sbjct: 73 SESVDKVMDQKEHKLNGKVIDPKRA 97
Score = 40.8 bits (94), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D E+++E+F +GE+E++ L D T + RGF FI FK+ E ++K
Sbjct: 117 DTPEEKIREYFGGFGEVESIELPMD-KTNKRRGFCFITFKEEEPVKK 162
>gi|417409049|gb|JAA51051.1| Putative rna-binding protein musashi/mrna cleavage and
polyadenylation factor i complex subunit hrp1, partial
[Desmodus rotundus]
Length = 252
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/154 (43%), Positives = 95/154 (61%), Gaps = 10/154 (6%)
Query: 115 ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNKK 174
+LK++FSK+GE+ + T+K DPNTGRSRGF FI+FKD ASVE V+ + H ++ +
Sbjct: 52 DLKDYFSKFGEVVDCTIKMDPNTGRSRGFGFILFKDA-----ASVEKVLDQKEHRLDGRV 106
Query: 175 IEAKKAKAKS----GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCF 230
I+ KKA A KIFVGGL+PE +EEI+ +F +FG I ++P D +R+ F F
Sbjct: 107 IDPKKAMAMKKEPVKKIFVGGLNPEATEEEIREYFGEFGEIEAIDLPMDPKSHKRRGFVF 166
Query: 231 ITF-EHESVVIDLLKNPKQKINDKEVDVKKATPK 263
ITF E E V L+ I + ++K A P+
Sbjct: 167 ITFKEEEEPVRKALEKKFHTIGASKCEIKVALPR 200
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 37/48 (77%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
D +LK++FSK+GE+ + T+K DPNTGRSRGF FI+FKD S+EK
Sbjct: 47 DTSKNDLKDYFSKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKV 94
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 59/109 (54%), Gaps = 7/109 (6%)
Query: 159 VEDVIAEGNHVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPY 218
V AEG+ I A + + +GK+FVGGLS + ++K +F++FG +++ +
Sbjct: 17 VNQTSAEGDQ------INASRTEDDAGKMFVGGLSWDTSKNDLKDYFSKFGEVVDCTIKM 70
Query: 219 DKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATP-KPEP 266
D + + + F FI F+ + V +L + +++ + +D KKA K EP
Sbjct: 71 DPNTGRSRGFGFILFKDAASVEKVLDQKEHRLDGRVIDPKKAMAMKKEP 119
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 38/67 (56%), Gaps = 4/67 (5%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
EE++E+F ++GEIE + L DP + + RGF FI FK+ E + ++E H I
Sbjct: 135 EEIREYFGEFGEIEAIDLPMDPKSHKRRGFVFITFKEEEEPVRKALEKKF----HTIGAS 190
Query: 174 KIEAKKA 180
K E K A
Sbjct: 191 KCEIKVA 197
Score = 47.0 bits (110), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 33/50 (66%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVY 657
EE++E+F ++GEIE + L DP + + RGF FI FK+ E + ++E +
Sbjct: 135 EEIREYFGEFGEIEAIDLPMDPKSHKRRGFVFITFKEEEEPVRKALEKKF 184
>gi|297676866|ref|XP_002816343.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B [Pongo
abelii]
Length = 259
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/154 (42%), Positives = 98/154 (63%), Gaps = 11/154 (7%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++LK++F+K+GE+ + T+K DPNTGRSRGF FI+FKD ASVE V+ + H ++ +
Sbjct: 13 KDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDA-----ASVEKVLDQKEHRLDGR 67
Query: 174 KIEAKKAKAKSG----KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFC 229
I+ KKA A KIFVGGL+PE +E+I+ +F +FG I E+P D ++R+ F
Sbjct: 68 VIDPKKAMAMKKDPVKKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKLNKRRGFV 127
Query: 230 FITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
FITF+ E V +L+ I+ ++ V A PK
Sbjct: 128 FITFKEEEPVKKVLEKKFHTISGSKIKV--AQPK 159
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 38/48 (79%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
D ++LK++F+K+GE+ + T+K DPNTGRSRGF FI+FKD S+EK
Sbjct: 9 DTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKV 56
Score = 46.6 bits (109), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 30/44 (68%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
E+++E+F ++GEIE + L DP + RGF FI FK+ E ++K
Sbjct: 97 EKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKKV 140
Score = 46.2 bits (108), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 44/74 (59%)
Query: 187 IFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNP 246
+FVGGLS + +++K +F +FG +++ + D + + + F FI F+ + V +L
Sbjct: 1 MFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQK 60
Query: 247 KQKINDKEVDVKKA 260
+ +++ + +D KKA
Sbjct: 61 EHRLDGRVIDPKKA 74
>gi|127138710|ref|NP_077380.2| heterogeneous nuclear ribonucleoprotein D0 isoform a [Rattus
norvegicus]
gi|149046816|gb|EDL99590.1| heterogeneous nuclear ribonucleoprotein D, isoform CRA_a [Rattus
norvegicus]
Length = 353
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 62/155 (40%), Positives = 99/155 (63%), Gaps = 10/155 (6%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++LK++FSK+G++ + TLK DP TGRSRGF F++FK++ES++K V+ + H +N K
Sbjct: 109 KDLKDYFSKFGDVVDCTLKLDPITGRSRGFGFVLFKESESVDK-----VMDQKEHKLNGK 163
Query: 174 KIEAKKAKAKS-----GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNF 228
I+ K+AKA KIFVGGLSP+ +E+I+ +F FG + E+P D ++R+ F
Sbjct: 164 VIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGF 223
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
CFITF+ E V +++ + + ++K A K
Sbjct: 224 CFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSK 258
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 39/47 (82%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D ++LK++FSK+G++ + TLK DP TGRSRGF F++FK++ES++K
Sbjct: 105 DTTKKDLKDYFSKFGDVVDCTLKLDPITGRSRGFGFVLFKESESVDK 151
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 55/96 (57%)
Query: 165 EGNHVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQ 224
EG+ + + EA A+ + K+F+GGLS + +++K +F++FG++++ + D +
Sbjct: 75 EGHSNSSPRHTEAATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGDVVDCTLKLDPITGR 134
Query: 225 RKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKA 260
+ F F+ F+ V ++ + K+N K +D K+A
Sbjct: 135 SRGFGFVLFKESESVDKVMDQKEHKLNGKVIDPKRA 170
Score = 43.9 bits (102), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D E+++E+F +GE+E++ L D T + RGF FI FK+ E ++K
Sbjct: 190 DTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 236
>gi|13124487|sp|Q9JJ54.1|HNRPD_RAT RecName: Full=Heterogeneous nuclear ribonucleoprotein D0;
Short=hnRNP D0; AltName: Full=AU-rich element
RNA-binding protein 1
gi|9588096|dbj|BAB03465.1| RNA binding protein p45AUF1 [Rattus norvegicus]
Length = 353
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 62/155 (40%), Positives = 99/155 (63%), Gaps = 10/155 (6%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++LK++FSK+G++ + TLK DP TGRSRGF F++FK++ES++K V+ + H +N K
Sbjct: 109 KDLKDYFSKFGDVVDCTLKLDPITGRSRGFGFVLFKESESVDK-----VMDQKEHKLNGK 163
Query: 174 KIEAKKAKAKS-----GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNF 228
I+ K+AKA KIFVGGLSP+ +E+I+ +F FG + E+P D ++R+ F
Sbjct: 164 VIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGF 223
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
CFITF+ E V +++ + + ++K A K
Sbjct: 224 CFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSK 258
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 39/47 (82%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D ++LK++FSK+G++ + TLK DP TGRSRGF F++FK++ES++K
Sbjct: 105 DTTKKDLKDYFSKFGDVVDCTLKLDPITGRSRGFGFVLFKESESVDK 151
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 55/96 (57%)
Query: 165 EGNHVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQ 224
EG+ + + EA A+ + K+F+GGLS + +++K +F++FG++++ + D +
Sbjct: 75 EGHSNSSPRHTEAATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGDVVDCTLKLDPITGR 134
Query: 225 RKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKA 260
+ F F+ F+ V ++ + K+N K +D K+A
Sbjct: 135 SRGFGFVLFKESESVDKVMDQKEHKLNGKVIDPKRA 170
Score = 43.9 bits (102), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D E+++E+F +GE+E++ L D T + RGF FI FK+ E ++K
Sbjct: 190 DTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 236
>gi|334310867|ref|XP_001381121.2| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B-like
[Monodelphis domestica]
Length = 376
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/154 (40%), Positives = 97/154 (62%), Gaps = 9/154 (5%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++LK++F+K+GE+ + T+K DPNTGRSRGF FI+FK E ASV+ V+ + H ++ +
Sbjct: 111 KDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFK-----ESASVDKVLDQKEHRLDGR 165
Query: 174 KIEAKKAKAKSG----KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFC 229
I+ KKA A KIFVGGL+PE +++I+ +F FG I E+P D ++R+ F
Sbjct: 166 VIDPKKAMAMKKDPVKKIFVGGLNPEATEDKIREYFGDFGEIESIELPMDPKTNKRRGFV 225
Query: 230 FITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
FITF+ E V +L+ + + ++K A PK
Sbjct: 226 FITFKEEDPVKKILEKKFHNVGGSKCEIKVAQPK 259
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 39/47 (82%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D ++LK++F+K+GE+ + T+K DPNTGRSRGF FI+FK++ S++K
Sbjct: 107 DTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKESASVDK 153
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 52/87 (59%)
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
+I A K + +GK+FVGGLS + +++K +F +FG +++ + D + + + F FI F
Sbjct: 86 QINASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILF 145
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKA 260
+ + V +L + +++ + +D KKA
Sbjct: 146 KESASVDKVLDQKEHRLDGRVIDPKKA 172
Score = 46.2 bits (108), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
G+ + TE+ ++E+F +GEIE++ L DP T + RGF FI FK+ + ++K
Sbjct: 187 GLNPEATEDKIREYFGDFGEIESIELPMDPKTNKRRGFVFITFKEEDPVKK 237
>gi|1814274|gb|AAC50956.1| ABBP-1 [Homo sapiens]
Length = 331
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/155 (42%), Positives = 98/155 (63%), Gaps = 10/155 (6%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++LK++F+K+GE+ + T+K DPNTGRSRGF FI+FKD ASVE V+ + H ++ +
Sbjct: 82 KDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDA-----ASVEKVLDQKEHRLDGR 136
Query: 174 KIEAKKAKAKS----GKIFVGGLSPEMKDEE-IKAHFAQFGNIIETEMPYDKSKSQRKNF 228
I+ KKA A KIFVGGL+PE EE I+ +F +FG I E+P D ++R+ F
Sbjct: 137 VIDPKKAMAMKKDPVKKIFVGGLNPESPTEEKIREYFGEFGEIEAIELPMDPKLNKRRGF 196
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
FITF+ E V +L+ ++ + ++K A PK
Sbjct: 197 VFITFKEEEPVKKVLEKKFHTVSGSKCEIKVAQPK 231
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 38/47 (80%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D ++LK++F+K+GE+ + T+K DPNTGRSRGF FI+FKD S+EK
Sbjct: 78 DTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEK 124
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 52/87 (59%)
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
+I A K + +GK+FVGGLS + +++K +F +FG +++ + D + + + F FI F
Sbjct: 57 QINASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILF 116
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKA 260
+ + V +L + +++ + +D KKA
Sbjct: 117 KDAASVEKVLDQKEHRLDGRVIDPKKA 143
Score = 46.2 bits (108), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 30/43 (69%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
E+++E+F ++GEIE + L DP + RGF FI FK+ E ++K
Sbjct: 167 EKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKK 209
>gi|345494041|ref|XP_001606007.2| PREDICTED: RNA-binding protein Musashi homolog Rbp6-like [Nasonia
vitripennis]
Length = 367
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/177 (38%), Positives = 99/177 (55%), Gaps = 14/177 (7%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
E L+E+F+KYG+I V + DP T RSRGF FI F D ASV+ V+A+G H ++ K
Sbjct: 36 ESLREYFTKYGDITEVMVMKDPTTRRSRGFGFITFAD-----PASVDKVLAQGTHELDGK 90
Query: 174 KIEAK---------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQ 224
KI+ K K ++ KIFVGGLS E++K +F QFG I + + +DK ++
Sbjct: 91 KIDPKVAFPRRTHPKMVTRTKKIFVGGLSAPTTLEDVKNYFEQFGPIEDAMLMFDKQTNR 150
Query: 225 RKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGVRGGRGGRGGRGG 281
+ F F+TF+ E VV + + +IN+K V+ KKA PK + GRG
Sbjct: 151 HRGFGFVTFQSEDVVDKVCEIHFHEINNKMVECKKAQPKEVMLPANLAKTRAAGRGA 207
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 30/43 (69%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
E L+E+F+KYG+I V + DP T RSRGF FI F D S++K
Sbjct: 36 ESLREYFTKYGDITEVMVMKDPTTRRSRGFGFITFADPASVDK 78
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 46/79 (58%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GK+F+GGLS + E ++ +F ++G+I E + D + + + F FITF + V +L
Sbjct: 22 GKMFIGGLSWQTSPESLREYFTKYGDITEVMVMKDPTTRRSRGFGFITFADPASVDKVLA 81
Query: 245 NPKQKINDKEVDVKKATPK 263
+++ K++D K A P+
Sbjct: 82 QGTHELDGKKIDPKVAFPR 100
Score = 39.7 bits (91), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 43/106 (40%), Gaps = 19/106 (17%)
Query: 452 YDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGVRGGRGGRG 511
+DK ++ + F F+TF+ E VV + + +IN+K V+ KKA PK +
Sbjct: 144 FDKQTNRHRGFGFVTFQSEDVVDKVCEIHFHEINNKMVECKKAQPKEVMLPANLAKTRAA 203
Query: 512 GRGGRGGRMAG-------------------GYGGYGGYGGGYGELD 538
GRG M GY GY +G Y +D
Sbjct: 204 GRGAYDNFMWSLGALPDGFPAAYAAYAAGRGYSGYPSFGLPYPTVD 249
>gi|240849376|ref|NP_001155365.1| Vg1 mRNA binding protein 40 [Xenopus laevis]
gi|49257602|gb|AAH74212.1| Unknown (protein for MGC:83385) [Xenopus laevis]
gi|157415960|gb|ABV54637.1| Vg1 mRNA binding protein 40 [Xenopus laevis]
Length = 326
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/154 (40%), Positives = 96/154 (62%), Gaps = 9/154 (5%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++LK++F K+GE+ + T+K DPNTGRSRGF FI+FKD ASV+ V+ H ++ +
Sbjct: 79 KDLKDYFEKFGEVSDCTIKMDPNTGRSRGFGFILFKDA-----ASVDKVLEHKEHRLDGR 133
Query: 174 KIEAKKAKAKSG----KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFC 229
I+ KKA A KIFVGGL+PE +++I+ +F FG I E+P D ++R+ F
Sbjct: 134 LIDPKKAMAMKKEPIKKIFVGGLNPEAGEDKIREYFETFGEIEAVELPMDPKTNKRRGFV 193
Query: 230 FITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
FITF+ E V +L+ ++ + ++K A PK
Sbjct: 194 FITFKEEEPVKKILEKKFHNVSGSKCEIKIAQPK 227
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 37/47 (78%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D ++LK++F K+GE+ + T+K DPNTGRSRGF FI+FKD S++K
Sbjct: 75 DTSKKDLKDYFEKFGEVSDCTIKMDPNTGRSRGFGFILFKDAASVDK 121
Score = 47.0 bits (110), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 30/43 (69%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
++++E+F +GEIE V L DP T + RGF FI FK+ E ++K
Sbjct: 163 DKIREYFETFGEIEAVELPMDPKTNKRRGFVFITFKEEEPVKK 205
Score = 46.6 bits (109), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+FVGGLS + +++K +F +FG + + + D + + + F FI F+ + V +L++
Sbjct: 66 KMFVGGLSWDTSKKDLKDYFEKFGEVSDCTIKMDPNTGRSRGFGFILFKDAASVDKVLEH 125
Query: 246 PKQKINDKEVDVKKATP-KPEPF 267
+ +++ + +D KKA K EP
Sbjct: 126 KEHRLDGRLIDPKKAMAMKKEPI 148
>gi|337451|gb|AAA36575.1| hnRNP type A/B protein [Homo sapiens]
gi|228098|prf||1717217A hnRNP protein A/B
Length = 284
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/155 (42%), Positives = 98/155 (63%), Gaps = 10/155 (6%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++LK++F+K+GE+ + T+K DPNTGRSRGF FI+FKD ASVE V+ + H ++ +
Sbjct: 82 KDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDA-----ASVEKVLDQKEHRLDGR 136
Query: 174 KIEAKKAKAKS----GKIFVGGLSPEMKDEE-IKAHFAQFGNIIETEMPYDKSKSQRKNF 228
I+ KKA A KIFVGGL+PE EE I+ +F +FG I E+P D ++R+ F
Sbjct: 137 VIDPKKAMAMKKDPVKKIFVGGLNPESPTEEKIREYFGEFGEIEAIELPMDPKLNKRRGF 196
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
FITF+ E V +L+ ++ + ++K A PK
Sbjct: 197 VFITFKEEEPVKKVLEKKFHTVSGSKCEIKVAQPK 231
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 38/47 (80%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D ++LK++F+K+GE+ + T+K DPNTGRSRGF FI+FKD S+EK
Sbjct: 78 DTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEK 124
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 52/87 (59%)
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
+I A K + +GK+FVGGLS + +++K +F +FG +++ + D + + + F FI F
Sbjct: 57 QINASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILF 116
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKA 260
+ + V +L + +++ + +D KKA
Sbjct: 117 KDAASVEKVLDQKEHRLDGRVIDPKKA 143
Score = 46.2 bits (108), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 30/43 (69%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
E+++E+F ++GEIE + L DP + RGF FI FK+ E ++K
Sbjct: 167 EKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKK 209
>gi|67972636|ref|NP_997752.2| heterogeneous nuclear ribonucleoprotein A/B [Danio rerio]
gi|42542905|gb|AAH66454.1| Heterogeneous nuclear ribonucleoprotein A/B [Danio rerio]
gi|67677894|gb|AAH97183.1| Heterogeneous nuclear ribonucleoprotein A/B [Danio rerio]
Length = 340
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/135 (44%), Positives = 89/135 (65%), Gaps = 9/135 (6%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++LK++FSK+GE+ + T+K DPNTGRSRGF FI+FK E + V+ V+A+ H ++ +
Sbjct: 83 KDLKDYFSKFGEVTDCTIKMDPNTGRSRGFGFILFK-----EPSGVDKVLAQKEHRLDGR 137
Query: 174 KIEAKKAKAKS----GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFC 229
+I+ KKA A KIFVGGL+PE +E I+ +F FG I E+P D ++R+ F
Sbjct: 138 QIDPKKAMAMKKEPVKKIFVGGLNPETTEERIREYFGAFGEIETIELPMDPKSNKRRGFV 197
Query: 230 FITFEHESVVIDLLK 244
FITF+ E V +L+
Sbjct: 198 FITFKEEEAVKKILE 212
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 60/102 (58%), Gaps = 1/102 (0%)
Query: 166 GNHVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQR 225
G+ + +I+A K + +GK+FVGGLS + +++K +F++FG + + + D + +
Sbjct: 50 GDDGADGGQIDASKGEEDAGKMFVGGLSWDTSKKDLKDYFSKFGEVTDCTIKMDPNTGRS 109
Query: 226 KNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATP-KPEP 266
+ F FI F+ S V +L + +++ +++D KKA K EP
Sbjct: 110 RGFGFILFKEPSGVDKVLAQKEHRLDGRQIDPKKAMAMKKEP 151
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 37/47 (78%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D ++LK++FSK+GE+ + T+K DPNTGRSRGF FI+FK+ ++K
Sbjct: 79 DTSKKDLKDYFSKFGEVTDCTIKMDPNTGRSRGFGFILFKEPSGVDK 125
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
G+ + TEE ++E+F +GEIE + L DP + + RGF FI FK+ E+++K
Sbjct: 159 GLNPETTEERIREYFGAFGEIETIELPMDPKSNKRRGFVFITFKEEEAVKK 209
>gi|417399538|gb|JAA46770.1| Putative rna-binding protein musashi/mrna cleavage and
polyadenylation factor i complex subunit hrp1 [Desmodus
rotundus]
Length = 354
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/155 (41%), Positives = 101/155 (65%), Gaps = 11/155 (7%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++LK++FSK+GE+ + TLK DP TGRSRGF F++FK++ES++K V+ + H +N K
Sbjct: 111 KDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDK-----VMDQKEHKLNGK 165
Query: 174 KIEAKKAKAKS-----GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNF 228
I+ K+AKA KIFVGGLSP+ +E+I+ +F FG + E+P DK+ ++R+ F
Sbjct: 166 VIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDKT-NKRRGF 224
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
CFITF+ E V +++ + + ++K A K
Sbjct: 225 CFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSK 259
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 39/47 (82%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D ++LK++FSK+GE+ + TLK DP TGRSRGF F++FK++ES++K
Sbjct: 107 DTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDK 153
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 54/96 (56%)
Query: 165 EGNHVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQ 224
EG+ + + EA A+ + K+F+GGLS + +++K +F++FG +++ + D +
Sbjct: 77 EGHSNSSPRHSEAAAAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGR 136
Query: 225 RKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKA 260
+ F F+ F+ V ++ + K+N K +D K+A
Sbjct: 137 SRGFGFVLFKESESVDKVMDQKEHKLNGKVIDPKRA 172
Score = 40.4 bits (93), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D E+++E+F +GE+E++ L D T + RGF FI FK+ E ++K
Sbjct: 192 DTPEEKIREYFGGFGEVESIELPMD-KTNKRRGFCFITFKEEEPVKK 237
>gi|148227150|ref|NP_001088992.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa) [Xenopus laevis]
gi|52082714|gb|AAU25946.1| p37 AUF1 [Xenopus laevis]
Length = 295
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/152 (39%), Positives = 98/152 (64%), Gaps = 10/152 (6%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++LK++FSK+GE+ + TLK DP TGRSRGF F++FK++E ++K V+ + H +N K
Sbjct: 52 KDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESEGVDK-----VMEQKEHKLNGK 106
Query: 174 KIEAKKAKAKS-----GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNF 228
I+ K+AKA KIFVGGLSP+ +++I+ +F FG + E+P D ++R+ F
Sbjct: 107 VIDPKRAKAMKTKEPVKKIFVGGLSPDTPEDKIREYFGTFGEVEAIELPMDNKTNKRRGF 166
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKA 260
CFITF+ E V ++++ + + ++K A
Sbjct: 167 CFITFKEEDPVKNIMEKKYHNVGLSKCEIKVA 198
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 62/108 (57%), Gaps = 2/108 (1%)
Query: 155 EKASVEDVIAEGNHVINNK--KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNII 212
++A +E AE + N+ KI+A K + GK+F+GGLS + +++K +F++FG ++
Sbjct: 6 DEAMMEATTAETEEIGQNEGVKIDASKTEEDEGKMFIGGLSWDTTKKDLKDYFSKFGEVV 65
Query: 213 ETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKA 260
+ + D + + F F+ F+ V +++ + K+N K +D K+A
Sbjct: 66 DCTLKLDPITGRSRGFGFVLFKESEGVDKVMEQKEHKLNGKVIDPKRA 113
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 38/48 (79%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
D ++LK++FSK+GE+ + TLK DP TGRSRGF F++FK++E ++K
Sbjct: 48 DTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESEGVDKV 95
Score = 39.7 bits (91), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 29/46 (63%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLE 649
D ++++E+F +GE+E + L D T + RGF FI FK+ + ++
Sbjct: 133 DTPEDKIREYFGTFGEVEAIELPMDNKTNKRRGFCFITFKEEDPVK 178
>gi|158523286|sp|Q99729.2|ROAA_HUMAN RecName: Full=Heterogeneous nuclear ribonucleoprotein A/B;
Short=hnRNP A/B; AltName: Full=APOBEC1-binding protein
1; Short=ABBP-1
Length = 332
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/155 (42%), Positives = 98/155 (63%), Gaps = 10/155 (6%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++LK++F+K+GE+ + T+K DPNTGRSRGF FI+FKD ASVE V+ + H ++ +
Sbjct: 83 KDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDA-----ASVEKVLDQKEHRLDGR 137
Query: 174 KIEAKKAKAKS----GKIFVGGLSPEMKDEE-IKAHFAQFGNIIETEMPYDKSKSQRKNF 228
I+ KKA A KIFVGGL+PE EE I+ +F +FG I E+P D ++R+ F
Sbjct: 138 VIDPKKAMAMKKDPVKKIFVGGLNPESPTEEKIREYFGEFGEIEAIELPMDPKLNKRRGF 197
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
FITF+ E V +L+ ++ + ++K A PK
Sbjct: 198 VFITFKEEEPVKKVLEKKFHTVSGSKCEIKVAQPK 232
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 38/47 (80%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D ++LK++F+K+GE+ + T+K DPNTGRSRGF FI+FKD S+EK
Sbjct: 79 DTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEK 125
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 52/87 (59%)
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
+I A K + +GK+FVGGLS + +++K +F +FG +++ + D + + + F FI F
Sbjct: 58 QINASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILF 117
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKA 260
+ + V +L + +++ + +D KKA
Sbjct: 118 KDAASVEKVLDQKEHRLDGRVIDPKKA 144
Score = 46.2 bits (108), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 30/43 (69%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
E+++E+F ++GEIE + L DP + RGF FI FK+ E ++K
Sbjct: 168 EKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKK 210
>gi|47086935|ref|NP_998467.1| heterogeneous nuclear ribonucleoprotein A/B [Danio rerio]
gi|44890703|gb|AAH66681.1| Zgc:77052 [Danio rerio]
Length = 309
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/154 (39%), Positives = 99/154 (64%), Gaps = 9/154 (5%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++LK++FSK+GE+ + T+K D NTGRSRGF FI+FK+++S+++ V+ + H ++ +
Sbjct: 59 KDLKDYFSKFGEVMDCTIKMDSNTGRSRGFGFILFKESDSVDR-----VLQQKEHRLDGR 113
Query: 174 KIEAKKA----KAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFC 229
+I+ K+A K KIFVGGL+PE +E+I+ +F FG I E+P D S+R+ F
Sbjct: 114 QIDPKRAMAIKKEPVKKIFVGGLNPETTEEKIREYFGSFGEIETIELPTDPKTSKRRGFV 173
Query: 230 FITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
FITF+ E V +L+ + + ++K A PK
Sbjct: 174 FITFKEEFAVKKILEKKYHNVCGSKCEIKIAQPK 207
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 58/94 (61%), Gaps = 1/94 (1%)
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
+I+A K + +GK+FVGGLS + +++K +F++FG +++ + D + + + F FI F
Sbjct: 34 QIDASKCEEDAGKMFVGGLSWDTSKKDLKDYFSKFGEVMDCTIKMDSNTGRSRGFGFILF 93
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKATP-KPEP 266
+ V +L+ + +++ +++D K+A K EP
Sbjct: 94 KESDSVDRVLQQKEHRLDGRQIDPKRAMAIKKEP 127
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 39/47 (82%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D ++LK++FSK+GE+ + T+K D NTGRSRGF FI+FK+++S+++
Sbjct: 55 DTSKKDLKDYFSKFGEVMDCTIKMDSNTGRSRGFGFILFKESDSVDR 101
Score = 47.0 bits (110), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
G+ + TEE ++E+F +GEIE + L +DP T + RGF FI FK+ +++K
Sbjct: 135 GLNPETTEEKIREYFGSFGEIETIELPTDPKTSKRRGFVFITFKEEFAVKK 185
>gi|328711026|ref|XP_001943905.2| PREDICTED: hypothetical protein LOC100169433 [Acyrthosiphon pisum]
Length = 530
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/159 (39%), Positives = 98/159 (61%), Gaps = 13/159 (8%)
Query: 113 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINN 172
++LK++F +G++ NV + DP T RSRGF FI F D E++EK V+A H ++
Sbjct: 231 ADKLKQYFGMFGDVTNVLIMKDPITQRSRGFGFITFSDAETVEK-----VLAVPIHTLDG 285
Query: 173 KKIEAK--------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQ 224
KKI+ K KA +K+ KIFVGG+S + +E+KA+F+QFG + ET M D+ +
Sbjct: 286 KKIDPKHATPKNRPKAGSKTKKIFVGGVSQDTTADEVKAYFSQFGKVEETVMLMDQHTKR 345
Query: 225 RKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ F F+TFE++ +V + + I +K+V+ KKA PK
Sbjct: 346 HRGFGFVTFENDDIVDTICEIHFHTIKNKKVECKKAQPK 384
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 45/83 (54%)
Query: 184 SGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLL 243
S K+FVGGLS + +++K +F FG++ + D + + F FITF V +L
Sbjct: 217 SAKLFVGGLSWQTSADKLKQYFGMFGDVTNVLIMKDPITQRSRGFGFITFSDAETVEKVL 276
Query: 244 KNPKQKINDKEVDVKKATPKPEP 266
P ++ K++D K ATPK P
Sbjct: 277 AVPIHTLDGKKIDPKHATPKNRP 299
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 31/44 (70%)
Query: 607 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
++LK++F +G++ NV + DP T RSRGF FI F D E++EK
Sbjct: 231 ADKLKQYFGMFGDVTNVLIMKDPITQRSRGFGFITFSDAETVEK 274
Score = 42.0 bits (97), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 38/57 (66%), Gaps = 2/57 (3%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFYS 660
D +E+K +FS++G++E + D +T R RGF F+ F++ + ++ ++ +++F++
Sbjct: 316 DTTADEVKAYFSQFGKVEETVMLMDQHTKRHRGFGFVTFENDDIVD--TICEIHFHT 370
>gi|321461997|gb|EFX73024.1| hypothetical protein DAPPUDRAFT_32116 [Daphnia pulex]
Length = 185
Score = 117 bits (293), Expect = 2e-23, Method: Composition-based stats.
Identities = 65/170 (38%), Positives = 96/170 (56%), Gaps = 14/170 (8%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
E L+E+FSK+G++ V + DP T RSRGF F+ F D ASV+ V+A H ++ K
Sbjct: 16 EGLREYFSKFGDVTEVMVMKDPTTRRSRGFGFVTFADA-----ASVDKVLASAPHELDGK 70
Query: 174 KIEAK---------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQ 224
KI+ K K ++ KIFVGGLS +++K +F QFG + + + +DK ++
Sbjct: 71 KIDPKVAFPRRAHPKMVTRTKKIFVGGLSAPSTVDDVKGYFEQFGRVEDAMLMFDKQTNR 130
Query: 225 RKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGVRGGRG 274
+ F F+TFE E VV + + +IN+K V+ KKA PK V RG
Sbjct: 131 HRGFAFVTFESEDVVDKVCEIHFHEINNKMVECKKAQPKEVMLPVNAARG 180
Score = 51.6 bits (122), Expect = 0.001, Method: Composition-based stats.
Identities = 21/43 (48%), Positives = 30/43 (69%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
E L+E+FSK+G++ V + DP T RSRGF F+ F D S++K
Sbjct: 16 EGLREYFSKFGDVTEVMVMKDPTTRRSRGFGFVTFADAASVDK 58
Score = 51.2 bits (121), Expect = 0.002, Method: Composition-based stats.
Identities = 23/78 (29%), Positives = 47/78 (60%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+F+GGLS + E ++ +F++FG++ E + D + + + F F+TF + V +L +
Sbjct: 3 KMFIGGLSWQTSAEGLREYFSKFGDVTEVMVMKDPTTRRSRGFGFVTFADAASVDKVLAS 62
Query: 246 PKQKINDKEVDVKKATPK 263
+++ K++D K A P+
Sbjct: 63 APHELDGKKIDPKVAFPR 80
Score = 43.1 bits (100), Expect = 0.42, Method: Composition-based stats.
Identities = 22/57 (38%), Positives = 32/57 (56%)
Query: 452 YDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGVRGGRG 508
+DK ++ + F F+TFE E VV + + +IN+K V+ KKA PK V RG
Sbjct: 124 FDKQTNRHRGFAFVTFESEDVVDKVCEIHFHEINNKMVECKKAQPKEVMLPVNAARG 180
Score = 42.0 bits (97), Expect = 1.1, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 38/63 (60%), Gaps = 6/63 (9%)
Query: 597 VSHPGIVDKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDV 656
+S P VD ++K +F ++G +E+ L D T R RGFAF+ F+ + ++K V ++
Sbjct: 98 LSAPSTVD----DVKGYFEQFGRVEDAMLMFDKQTNRHRGFAFVTFESEDVVDK--VCEI 151
Query: 657 YFY 659
+F+
Sbjct: 152 HFH 154
>gi|71999554|ref|NP_001023574.1| Protein SQD-1, isoform b [Caenorhabditis elegans]
gi|351059313|emb|CCD74156.1| Protein SQD-1, isoform b [Caenorhabditis elegans]
Length = 308
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/162 (38%), Positives = 88/162 (54%), Gaps = 6/162 (3%)
Query: 113 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINN 172
E+L HF++YGE+ +K D GRSRGFAF+ F E + A +A I
Sbjct: 42 NEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLA-----LAAREQTIKG 96
Query: 173 KKIEAKKAKAKSGK-IFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFI 231
K +E K AK++ K +FVGGL + ++++++HF QFG + + E P+DK R+NF FI
Sbjct: 97 KSVEVKPAKSRENKKVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFI 156
Query: 232 TFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGVRGGR 273
FE E KQ +E DVKKA P+ + F GR
Sbjct: 157 VFEEEESADKASSQTKQTFGTRECDVKKAVPQGKRFPGAQGR 198
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 46/78 (58%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
KIFVGG+SPE+ +E++ +HF Q+G + + ++ YD++ + + F F+ F L
Sbjct: 30 KIFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALAA 89
Query: 246 PKQKINDKEVDVKKATPK 263
+Q I K V+VK A +
Sbjct: 90 REQTIKGKSVEVKPAKSR 107
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 32/64 (50%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGV 503
++ + E P+DK R+NF FI FE E KQ +E DVKKA P+ + F
Sbjct: 135 KVDDIEWPFDKQTKARRNFAFIVFEEEESADKASSQTKQTFGTRECDVKKAVPQGKRFPG 194
Query: 504 RGGR 507
GR
Sbjct: 195 AQGR 198
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 27/45 (60%)
Query: 607 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
E+L HF++YGE+ +K D GRSRGFAF+ F E + A
Sbjct: 42 NEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLA 86
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 593 KNKMVSHPGIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
+NK V G+ +E+ L+ HF ++G+++++ D T R FAFIVF++ ES +KA
Sbjct: 108 ENKKVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESADKA 167
Query: 652 SVE 654
S +
Sbjct: 168 SSQ 170
>gi|108744009|gb|ABG02277.1| heterogeneous nuclear ribonucleoprotein A/B [Haplochromis burtoni]
Length = 316
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/154 (40%), Positives = 94/154 (61%), Gaps = 9/154 (5%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++LK++FSK+GE+ + T+K D NTGRSRGF F++FKD+ ASV+ V+ + H ++ +
Sbjct: 70 KDLKDYFSKFGEVSDCTIKMDSNTGRSRGFGFVLFKDS-----ASVDKVLEQKEHRLDGR 124
Query: 174 KIEAKKAKAKSG----KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFC 229
I+ K+A A KIFVGGL+PE +E I+ +F FG I E+P D +R+ F
Sbjct: 125 NIDPKRAMAMKKDPVKKIFVGGLNPEATEETIREYFGAFGEIETIELPIDPKSKKRRGFI 184
Query: 230 FITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
FIT++ E+ V L+ I ++K A PK
Sbjct: 185 FITYKEETSVKKCLEKKYHNIQGGRCELKIAQPK 218
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 38/47 (80%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D ++LK++FSK+GE+ + T+K D NTGRSRGF F++FKD+ S++K
Sbjct: 66 DTSKKDLKDYFSKFGEVSDCTIKMDSNTGRSRGFGFVLFKDSASVDK 112
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 58/96 (60%)
Query: 165 EGNHVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQ 224
E ++ + KI+A K + +GK+FVGGLS + +++K +F++FG + + + D + +
Sbjct: 36 EQDNNTDGGKIDASKGEEDAGKMFVGGLSWDTSKKDLKDYFSKFGEVSDCTIKMDSNTGR 95
Query: 225 RKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKA 260
+ F F+ F+ + V +L+ + +++ + +D K+A
Sbjct: 96 SRGFGFVLFKDSASVDKVLEQKEHRLDGRNIDPKRA 131
Score = 43.9 bits (102), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
G+ + TEE ++E+F +GEIE + L DP + + RGF FI +K+ S++K
Sbjct: 146 GLNPEATEETIREYFGAFGEIETIELPIDPKSKKRRGFIFITYKEETSVKKC 197
>gi|71999552|ref|NP_001023573.1| Protein SQD-1, isoform a [Caenorhabditis elegans]
gi|351059312|emb|CCD74155.1| Protein SQD-1, isoform a [Caenorhabditis elegans]
Length = 305
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/162 (38%), Positives = 88/162 (54%), Gaps = 6/162 (3%)
Query: 113 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINN 172
E+L HF++YGE+ +K D GRSRGFAF+ F E + A +A I
Sbjct: 42 NEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLA-----LAAREQTIKG 96
Query: 173 KKIEAKKAKAKSGK-IFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFI 231
K +E K AK++ K +FVGGL + ++++++HF QFG + + E P+DK R+NF FI
Sbjct: 97 KSVEVKPAKSRENKKVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFI 156
Query: 232 TFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGVRGGR 273
FE E KQ +E DVKKA P+ + F GR
Sbjct: 157 VFEEEESADKASSQTKQTFGTRECDVKKAVPQGKRFPGAQGR 198
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 46/78 (58%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
KIFVGG+SPE+ +E++ +HF Q+G + + ++ YD++ + + F F+ F L
Sbjct: 30 KIFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALAA 89
Query: 246 PKQKINDKEVDVKKATPK 263
+Q I K V+VK A +
Sbjct: 90 REQTIKGKSVEVKPAKSR 107
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 32/64 (50%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGV 503
++ + E P+DK R+NF FI FE E KQ +E DVKKA P+ + F
Sbjct: 135 KVDDIEWPFDKQTKARRNFAFIVFEEEESADKASSQTKQTFGTRECDVKKAVPQGKRFPG 194
Query: 504 RGGR 507
GR
Sbjct: 195 AQGR 198
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 27/45 (60%)
Query: 607 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
E+L HF++YGE+ +K D GRSRGFAF+ F E + A
Sbjct: 42 NEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLA 86
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 593 KNKMVSHPGIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
+NK V G+ +E+ L+ HF ++G+++++ D T R FAFIVF++ ES +KA
Sbjct: 108 ENKKVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESADKA 167
Query: 652 SVE 654
S +
Sbjct: 168 SSQ 170
>gi|348531962|ref|XP_003453476.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B-like
[Oreochromis niloticus]
Length = 315
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 62/153 (40%), Positives = 93/153 (60%), Gaps = 9/153 (5%)
Query: 115 ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNKK 174
+LK++FSK+GE+ + T+K D NTGRSRGF F++FKD+ ASV+ V+ + H ++ +
Sbjct: 71 DLKDYFSKFGEVSDCTIKMDSNTGRSRGFGFVLFKDS-----ASVDKVLEQKEHRLDGRN 125
Query: 175 IEAKKAKAKSG----KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCF 230
I+ K+A A KIFVGGL+PE +E I+ +F FG I E+P D +R+ F F
Sbjct: 126 IDPKRAMAMKKDPVKKIFVGGLNPEATEETIREYFGAFGEIETIELPIDPKSKKRRGFIF 185
Query: 231 ITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
IT++ E+ V L+ I ++K A PK
Sbjct: 186 ITYKEETSVKKCLEKKYHNIQGGRCELKIAQPK 218
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 37/47 (78%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D +LK++FSK+GE+ + T+K D NTGRSRGF F++FKD+ S++K
Sbjct: 66 DTSKTDLKDYFSKFGEVSDCTIKMDSNTGRSRGFGFVLFKDSASVDK 112
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 57/96 (59%)
Query: 165 EGNHVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQ 224
E ++ + KI+A K + +GK+FVGGLS + ++K +F++FG + + + D + +
Sbjct: 36 EQDNNTDGGKIDASKGEEDAGKVFVGGLSWDTSKTDLKDYFSKFGEVSDCTIKMDSNTGR 95
Query: 225 RKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKA 260
+ F F+ F+ + V +L+ + +++ + +D K+A
Sbjct: 96 SRGFGFVLFKDSASVDKVLEQKEHRLDGRNIDPKRA 131
Score = 46.2 bits (108), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 44/78 (56%), Gaps = 6/78 (7%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + TEE ++E+F +GEIE + L DP + + RGF FI +K E+ SV+ + +
Sbjct: 146 GLNPEATEETIREYFGAFGEIETIELPIDPKSKKRRGFIFITYK-----EETSVKKCLEK 200
Query: 166 GNHVINNKKIEAKKAKAK 183
H I + E K A+ K
Sbjct: 201 KYHNIQGGRCELKIAQPK 218
Score = 43.9 bits (102), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
G+ + TEE ++E+F +GEIE + L DP + + RGF FI +K+ S++K
Sbjct: 146 GLNPEATEETIREYFGAFGEIETIELPIDPKSKKRRGFIFITYKEETSVKKC 197
>gi|5052976|gb|AAD38787.1|AF153444_1 hnRNP A/B related protein, partial [Felis catus]
Length = 279
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 64/154 (41%), Positives = 98/154 (63%), Gaps = 9/154 (5%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++LK++F+K+GE+ + T+K PNTGRS+GF FI+FKD ASVE V+ + H ++ +
Sbjct: 78 KDLKDYFTKFGEVVDCTIKMVPNTGRSKGFGFILFKDA-----ASVEKVLDQKEHRLDGR 132
Query: 174 KIEAKKAKAKSG----KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFC 229
I+ KKA A KIFVGGL+PE +E+I+ +F +FG I E+P D ++R+ F
Sbjct: 133 VIDPKKAMAMKKDPVKKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKTNKRRGFV 192
Query: 230 FITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
FITF+ E V +L+ I+ + ++K A PK
Sbjct: 193 FITFKEEEPVKKVLEKKFHTISGSKCEIKVAQPK 226
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 37/47 (78%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D ++LK++F+K+GE+ + T+K PNTGRS+GF FI+FKD S+EK
Sbjct: 74 DTSKKDLKDYFTKFGEVVDCTIKMVPNTGRSKGFGFILFKDAASVEK 120
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 51/87 (58%)
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
+I A K + +GK+FVGGLS + +++K +F +FG +++ + + + K F FI F
Sbjct: 53 QINASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMVPNTGRSKGFGFILF 112
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKA 260
+ + V +L + +++ + +D KKA
Sbjct: 113 KDAASVEKVLDQKEHRLDGRVIDPKKA 139
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 31/43 (72%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
E+++E+F ++GEIE + L DP T + RGF FI FK+ E ++K
Sbjct: 162 EKIREYFGEFGEIEAIELPMDPKTNKRRGFVFITFKEEEPVKK 204
>gi|27709546|ref|XP_229073.1| PREDICTED: uncharacterized protein LOC302780 [Rattus norvegicus]
gi|109512293|ref|XP_001066404.1| PREDICTED: uncharacterized protein LOC302780 [Rattus norvegicus]
Length = 565
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 69/184 (37%), Positives = 103/184 (55%), Gaps = 15/184 (8%)
Query: 93 FYIMEAKNKMVSHPGIVHKITEELK-----EHFSKYGEIENVTLKSDPNTGRSRGFAFIV 147
F I KN+ + + +++EL E+ SK+GEI + +K DPNTG SRGF F++
Sbjct: 21 FRIDATKNQQDASKMFIGGLSQELNKQVLLEYLSKFGEIIDFIIKIDPNTGLSRGFGFVL 80
Query: 148 FKDTESLEKASVEDVIAEGNHVINNKKIEAKKAKAKSG-----KIFVGGLSPEMKDEEIK 202
FKD+ ++EK V+ +H ++ KKIE K+AKA K+FVGGL+P M +E+I+
Sbjct: 81 FKDSSTVEK-----VLRVKDHKVDGKKIEFKRAKALESQFPIKKVFVGGLNPRMSEEKIR 135
Query: 203 AHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATP 262
A+F FG I E+P +R+ F FI + E+ V +L+ I +VK A P
Sbjct: 136 AYFGTFGQIEAIELPLCSDTQERRAFGFIKYMDENPVRKVLETRYHFIGSSRCEVKMAFP 195
Query: 263 KPEP 266
K P
Sbjct: 196 KEYP 199
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 43/69 (62%), Gaps = 5/69 (7%)
Query: 587 FYIVEAKNKMVSHPGIVDKITEELK-----EHFSKYGEIENVTLKSDPNTGRSRGFAFIV 641
F I KN+ + + +++EL E+ SK+GEI + +K DPNTG SRGF F++
Sbjct: 21 FRIDATKNQQDASKMFIGGLSQELNKQVLLEYLSKFGEIIDFIIKIDPNTGLSRGFGFVL 80
Query: 642 FKDTESLEK 650
FKD+ ++EK
Sbjct: 81 FKDSSTVEK 89
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 54/97 (55%)
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
+I+A K + + K+F+GGLS E+ + + + ++FG II+ + D + + F F+ F
Sbjct: 22 RIDATKNQQDASKMFIGGLSQELNKQVLLEYLSKFGEIIDFIIKIDPNTGLSRGFGFVLF 81
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGVR 270
+ S V +L+ K++ K+++ K+A F ++
Sbjct: 82 KDSSTVEKVLRVKDHKVDGKKIEFKRAKALESQFPIK 118
>gi|405957004|gb|EKC23243.1| Heterogeneous nuclear ribonucleoprotein A/B [Crassostrea gigas]
Length = 475
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 59/145 (40%), Positives = 88/145 (60%), Gaps = 10/145 (6%)
Query: 115 ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNKK 174
+LK++F+K+GE+EN LK D T RSRGF F+VFKD ++V+ V+ E H + +
Sbjct: 73 DLKDYFTKFGEVENCVLKQDLETKRSRGFGFVVFKDP-----STVDKVLDEKTHNLGGRN 127
Query: 175 IEAKKAKAKS-----GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFC 229
I+ KKA + KIFVG + P + + EIK +F FG + + ++PYDK+K QR+ FC
Sbjct: 128 IDPKKANPRKKEEVIKKIFVGKVDPSLTEAEIKEYFETFGEVKKIDLPYDKTKEQRRAFC 187
Query: 230 FITFEHESVVIDLLKNPKQKINDKE 254
F+ F+ E V + KI D+E
Sbjct: 188 FVEFKEEDAVKKITDQAVHKIKDQE 212
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 33/43 (76%)
Query: 609 ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
+LK++F+K+GE+EN LK D T RSRGF F+VFKD +++K
Sbjct: 73 DLKDYFTKFGEVENCVLKQDLETKRSRGFGFVVFKDPSTVDKV 115
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 40/78 (51%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
KIFVG LS E +++K +F +FG + + D + + F F+ F+ S V +L
Sbjct: 59 KIFVGNLSWETSQKDLKDYFTKFGEVENCVLKQDLETKRSRGFGFVVFKDPSTVDKVLDE 118
Query: 246 PKQKINDKEVDVKKATPK 263
+ + +D KKA P+
Sbjct: 119 KTHNLGGRNIDPKKANPR 136
Score = 43.9 bits (102), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 28/45 (62%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKE 488
E+ + ++PYDK+K QR+ FCF+ F+ E V + KI D+E
Sbjct: 168 EVKKIDLPYDKTKEQRRAFCFVEFKEEDAVKKITDQAVHKIKDQE 212
>gi|550458|gb|AAA68014.1| ribonucleoprotein [Gallus gallus]
gi|1095499|prf||2109229A RNA-binding protein
Length = 285
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 62/154 (40%), Positives = 97/154 (62%), Gaps = 9/154 (5%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++LK++F+K+GE+ + T+K DPNTGRSRGF F +FK E SVE V+ + H ++ +
Sbjct: 87 KDLKDYFTKFGEVTDCTIKMDPNTGRSRGFGFRLFK-----EPGSVEKVLEQKEHRLDGR 141
Query: 174 KIEAKKAKAKSG----KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFC 229
I+ KKA A KIFVGGL+PE +E+I+ +F +FG I E+P D ++R+ F
Sbjct: 142 LIDPKKAMAMKKDPVKKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKTNKRRGFV 201
Query: 230 FITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
FI+F+ E V +L+ ++ + ++K A PK
Sbjct: 202 FISFKEEDPVKKVLEKKFHNVSGSKCEIKVAQPK 235
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 37/48 (77%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
D ++LK++F+K+GE+ + T+K DPNTGRSRGF F +FK+ S+EK
Sbjct: 83 DTSKKDLKDYFTKFGEVTDCTIKMDPNTGRSRGFGFRLFKEPGSVEKV 130
Score = 47.0 bits (110), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
G+ + TEE ++E+F ++GEIE + L DP T + RGF FI FK+ + ++K
Sbjct: 163 GLNPEATEEKIREYFGEFGEIEAIELPMDPKTNKRRGFVFISFKEEDPVKKV 214
Score = 42.7 bits (99), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 43/75 (57%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+FVGGLS + +++K +F +FG + + + D + + + F F F+ V +L+
Sbjct: 74 KMFVGGLSWDTSKKDLKDYFTKFGEVTDCTIKMDPNTGRSRGFGFRLFKEPGSVEKVLEQ 133
Query: 246 PKQKINDKEVDVKKA 260
+ +++ + +D KKA
Sbjct: 134 KEHRLDGRLIDPKKA 148
>gi|47214361|emb|CAG01206.1| unnamed protein product [Tetraodon nigroviridis]
Length = 256
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/185 (36%), Positives = 106/185 (57%), Gaps = 13/185 (7%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++LK++F+K+G++ + T+K D TGRSRGF FI+FKD ASVE V+ + H ++ +
Sbjct: 14 KDLKDYFNKFGDVTDCTIKMDQGTGRSRGFGFILFKDP-----ASVEKVLEQKEHKLDGR 68
Query: 174 KIEAKKA----KAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFC 229
I+ K+A K K+FVGGL+P+ E I+ +F +FG I E+P D +R+ F
Sbjct: 69 VIDPKRALAMKKEPVKKVFVGGLNPDTSKEVIQEYFEEFGEIENIELPQDPKTEKRRGFV 128
Query: 230 FITFEHESVVIDLLKNPKQKINDKEVDVKKATPK----PEPFGVRGGRGGRGGRGGRGGR 285
FIT++ E+ V L+N + + ++K A PK + +G R G RGG+G
Sbjct: 129 FITYKEEACVKKALENKFHTVGGSKCEIKIAQPKEVYQQQQYGNRSYGGRNRTRGGQGQN 188
Query: 286 MAGGY 290
GY
Sbjct: 189 WNQGY 193
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 36/48 (75%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
D ++LK++F+K+G++ + T+K D TGRSRGF FI+FKD S+EK
Sbjct: 10 DTSKKDLKDYFNKFGDVTDCTIKMDQGTGRSRGFGFILFKDPASVEKV 57
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 49/82 (59%), Gaps = 1/82 (1%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+FVGGLS + +++K +F +FG++ + + D+ + + F FI F+ + V +L+
Sbjct: 1 KMFVGGLSWDTSKKDLKDYFNKFGDVTDCTIKMDQGTGRSRGFGFILFKDPASVEKVLEQ 60
Query: 246 PKQKINDKEVDVKKATP-KPEP 266
+ K++ + +D K+A K EP
Sbjct: 61 KEHKLDGRVIDPKRALAMKKEP 82
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 32/48 (66%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
D E ++E+F ++GEIEN+ L DP T + RGF FI +K+ ++KA
Sbjct: 94 DTSKEVIQEYFEEFGEIENIELPQDPKTEKRRGFVFITYKEEACVKKA 141
Score = 43.1 bits (100), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 41/85 (48%), Gaps = 4/85 (4%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK----PE 499
EI E+P D +R+ F FIT++ E+ V L+N + + ++K A PK +
Sbjct: 109 EIENIELPQDPKTEKRRGFVFITYKEEACVKKALENKFHTVGGSKCEIKIAQPKEVYQQQ 168
Query: 500 PFGVRGGRGGRGGRGGRGGRMAGGY 524
+G R G RGG+G GY
Sbjct: 169 QYGNRSYGGRNRTRGGQGQNWNQGY 193
>gi|395816795|ref|XP_003781875.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like [Otolemur
garnettii]
Length = 350
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 63/169 (37%), Positives = 101/169 (59%), Gaps = 11/169 (6%)
Query: 115 ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNKK 174
+L E+ S++GE+ + +K+DP +GRSRGF F++FKD ASV+ V+ H ++ K
Sbjct: 97 DLTEYLSRFGEVVDCIIKTDPVSGRSRGFGFVLFKDA-----ASVDKVLELKEHKLDGKL 151
Query: 175 IEAKKAK-----AKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFC 229
I+ ++AK A K+FVGGLSP+ E+IK +F FG I E+P D+ ++R+ FC
Sbjct: 152 IDPQRAKPLKEKAPPKKVFVGGLSPDTSKEQIKDYFGAFGEIENIELPRDRKTNERRGFC 211
Query: 230 FITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGVRGGRGGRGG 278
F+T+ V LL++ I + ++K A PK E + + +GG+G
Sbjct: 212 FVTYTEGEPVKKLLESRYHHIGSGKCEIKVAQPK-EVYRQQQQKGGKGA 259
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 58/111 (52%), Gaps = 2/111 (1%)
Query: 157 ASVEDVIAEGN--HVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIET 214
++ED+ GN KI A K + GK+F+GGLS + ++ + ++FG +++
Sbjct: 52 TTMEDMSEVGNIEEFTEGSKINASKDQQTDGKMFIGGLSWDTSKRDLTEYLSRFGEVVDC 111
Query: 215 EMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE 265
+ D + + F F+ F+ + V +L+ + K++ K +D ++A P E
Sbjct: 112 IIKTDPVSGRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPQRAKPLKE 162
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 34/47 (72%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D +L E+ S++GE+ + +K+DP +GRSRGF F++FKD S++K
Sbjct: 92 DTSKRDLTEYLSRFGEVVDCIIKTDPVSGRSRGFGFVLFKDAASVDK 138
Score = 45.4 bits (106), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 39/70 (55%), Gaps = 5/70 (7%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
E++K++F +GEIEN+ L D T RGF F+ + + E ++K ++ H I +
Sbjct: 181 EQIKDYFGAFGEIENIELPRDRKTNERRGFCFVTYTEGEPVKK-----LLESRYHHIGSG 235
Query: 174 KIEAKKAKAK 183
K E K A+ K
Sbjct: 236 KCEIKVAQPK 245
Score = 43.9 bits (102), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 29/47 (61%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D E++K++F +GEIEN+ L D T RGF F+ + + E ++K
Sbjct: 177 DTSKEQIKDYFGAFGEIENIELPRDRKTNERRGFCFVTYTEGEPVKK 223
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGV 503
EI E+P D+ ++R+ FCF+T+ V LL++ I + ++K A PK E +
Sbjct: 192 EIENIELPRDRKTNERRGFCFVTYTEGEPVKKLLESRYHHIGSGKCEIKVAQPK-EVYRQ 250
Query: 504 RGGRGGRGG 512
+ +GG+G
Sbjct: 251 QQQKGGKGA 259
>gi|410914854|ref|XP_003970902.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B-like
[Takifugu rubripes]
Length = 307
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 72/193 (37%), Positives = 111/193 (57%), Gaps = 16/193 (8%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++LK++F+K+GE+ + T+K D ++GRSRGF F++FKD S+EK V+ + H ++ +
Sbjct: 70 KDLKDYFTKFGEVSDCTIKFDSDSGRSRGFGFVLFKDPSSVEK-----VLEQKEHRLDGR 124
Query: 174 KIEAKKAKAKSG----KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFC 229
I+ K+A A KIFVGGL PE +E I+ +F ++G I E+P D ++R+ F
Sbjct: 125 LIDPKRAMAMKKEPVKKIFVGGLIPEATEENIREYFGEYGEIENIELPLDPKSNKRRGFI 184
Query: 230 FITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGVRGGRGGRGGRGGRGGRMAGG 289
FIT++ E+ L+N I ++K A PK E + + RG GG R G
Sbjct: 185 FITYKEEASAKKCLENKFHTIEGSRCELKLAQPK-EVYQQQQYRGRSGGS-----RAGWG 238
Query: 290 YGGYG-GYGGGYG 301
YGG G+ GYG
Sbjct: 239 YGGNNQGWNQGYG 251
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 55/94 (58%), Gaps = 1/94 (1%)
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
KIEA K +GK+FVGGLS + +++K +F +FG + + + +D + + F F+ F
Sbjct: 45 KIEATKGDEDTGKMFVGGLSWDTSKKDLKDYFTKFGEVSDCTIKFDSDSGRSRGFGFVLF 104
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKATP-KPEP 266
+ S V +L+ + +++ + +D K+A K EP
Sbjct: 105 KDPSSVEKVLEQKEHRLDGRLIDPKRAMAMKKEP 138
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 37/47 (78%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D ++LK++F+K+GE+ + T+K D ++GRSRGF F++FKD S+EK
Sbjct: 66 DTSKKDLKDYFTKFGEVSDCTIKFDSDSGRSRGFGFVLFKDPSSVEK 112
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 36/52 (69%), Gaps = 1/52 (1%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
G++ + TEE ++E+F +YGEIEN+ L DP + + RGF FI +K+ S +K
Sbjct: 146 GLIPEATEENIREYFGEYGEIENIELPLDPKSNKRRGFIFITYKEEASAKKC 197
Score = 42.0 bits (97), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 45/93 (48%), Gaps = 7/93 (7%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGV 503
EI E+P D ++R+ F FIT++ E+ L+N I ++K A PK E +
Sbjct: 165 EIENIELPLDPKSNKRRGFIFITYKEEASAKKCLENKFHTIEGSRCELKLAQPK-EVYQQ 223
Query: 504 RGGRGGRGGRGGRGGRMAGGYGGYG-GYGGGYG 535
+ RG GG R GYGG G+ GYG
Sbjct: 224 QQYRGRSGGS-----RAGWGYGGNNQGWNQGYG 251
>gi|444516997|gb|ELV11328.1| Heterogeneous nuclear ribonucleoprotein D-like protein [Tupaia
chinensis]
Length = 415
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 62/155 (40%), Positives = 91/155 (58%), Gaps = 10/155 (6%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
E L ++ S++GEI + T+K DP+TG SRGF F++FKD+ ++E+A + H + K
Sbjct: 47 EMLIQYLSQFGEILDFTIKMDPDTGLSRGFGFVLFKDSAAVERA-----LRVKEHKLEGK 101
Query: 174 KIEAKKAKA-----KSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNF 228
KIE K+AKA K+FVGGL+P M +E+I+ +F FG I E+P + R+ F
Sbjct: 102 KIELKRAKALEIRFPPRKVFVGGLNPRMSEEKIREYFGTFGEISNIELPVSPGTNVRRAF 161
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
CFIT+ E V LL+ I ++K A PK
Sbjct: 162 CFITYTDERPVRKLLETRYHLIGSGRCEIKIALPK 196
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 54/98 (55%)
Query: 163 IAEGNHVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSK 222
++E N + +IEA K + + K+F+GGLS + E + + +QFG I++ + D
Sbjct: 11 LSEVNRLPEGFRIEASKTQDDASKMFIGGLSRDTSKEMLIQYLSQFGEILDFTIKMDPDT 70
Query: 223 SQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKA 260
+ F F+ F+ + V L+ + K+ K++++K+A
Sbjct: 71 GLSRGFGFVLFKDSAAVERALRVKEHKLEGKKIELKRA 108
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 36/48 (75%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
D E L ++ S++GEI + T+K DP+TG SRGF F++FKD+ ++E+A
Sbjct: 43 DTSKEMLIQYLSQFGEILDFTIKMDPDTGLSRGFGFVLFKDSAAVERA 90
Score = 40.4 bits (93), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
G+ +++EE ++E+F +GEI N+ L P T R F FI + D + K
Sbjct: 124 GLNPRMSEEKIREYFGTFGEISNIELPVSPGTNVRRAFCFITYTDERPVRK 174
>gi|365758528|gb|EHN00365.1| Hrp1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 539
Score = 116 bits (290), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 113/212 (53%), Gaps = 15/212 (7%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ TE+ L+E+F KYG + ++ + DP TGRSRGF F+ F EK S D + +
Sbjct: 168 GLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSF------EKPSSVDEVVK 221
Query: 166 GNHVINNKKIEAKKA-----KAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDK 220
H+++ K I+ K+A + K+GKIFVGG+ P+++ +E + F+Q+G II+ ++ DK
Sbjct: 222 TQHILDGKVIDPKRAIPRDEQDKTGKIFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDK 281
Query: 221 SKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGVRGGRGGRGGRG 280
Q + F F+T++ V + +N D+++++K+A P+ G G
Sbjct: 282 DTGQSRGFGFVTYDSADAVDRVCQNKFIDFKDRKIEIKRAEPRHMQQKSSNNGGTNTGSN 341
Query: 281 GRGGRMAGGYGGYGGYGGGYGGIL---YKPLL 309
G R G +G G + Y + Y P++
Sbjct: 342 GNMNRRGGNFGNQGDFNQMYQNPMMGGYNPMM 373
Score = 47.4 bits (111), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D + L+E+F KYG + ++ + DP TGRSRGF F+ F+ S+++
Sbjct: 172 DTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVDE 218
Score = 47.0 bits (110), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 52/83 (62%), Gaps = 1/83 (1%)
Query: 183 KSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDL 242
+S K+F+GGL+ + ++ ++ +F ++G + + ++ D + + + F F++FE S V ++
Sbjct: 160 ESCKMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVDEV 219
Query: 243 LKNPKQKINDKEVDVKKATPKPE 265
+K + ++ K +D K+A P+ E
Sbjct: 220 VKT-QHILDGKVIDPKRAIPRDE 241
Score = 39.7 bits (91), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 48/117 (41%), Gaps = 15/117 (12%)
Query: 445 IIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGVR 504
II+ ++ DK Q + F F+T++ V + +N D+++++K+A P+
Sbjct: 272 IIDAQLMLDKDTGQSRGFGFVTYDSADAVDRVCQNKFIDFKDRKIEIKRAEPRHMQQKSS 331
Query: 505 GGRGGRGGRGGRGGRMAGGYGGYGGYG--------GGYGEL-------DYLQLWQFF 546
G G G R G +G G + GGY + DY Q Q +
Sbjct: 332 NNGGTNTGSNGNMNRRGGNFGNQGDFNQMYQNPMMGGYNPMMNPQAMTDYYQKMQEY 388
>gi|346467163|gb|AEO33426.1| hypothetical protein [Amblyomma maculatum]
Length = 287
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 70/173 (40%), Positives = 101/173 (58%), Gaps = 16/173 (9%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
E L+E+FSK+G+I V + DP+T RSRGF F+ F D ASV+ V+A G H ++ K
Sbjct: 65 EGLREYFSKFGDITEVMVMKDPSTRRSRGFGFVTFSDP-----ASVDKVLANGPHELDGK 119
Query: 174 KIEAK---------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQ 224
KI+ K K ++ K+FVGGLS E++K +F QFG I + + +DK ++
Sbjct: 120 KIDPKIAFPKRAHPKMVTRTKKVFVGGLSAPTTLEDVKNYFQQFGRIEDAMLMFDKQTNR 179
Query: 225 RKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKP--EPFGVRGGRGG 275
+ F F+TFE+E VV + + +IN+K V+ KKA PK P V GRG
Sbjct: 180 HRGFGFVTFENEDVVDKVCEIHFHEINNKMVECKKAQPKEVMMPNNVARGRGA 232
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 50/85 (58%)
Query: 179 KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESV 238
+A GK+F+GGLS + E ++ +F++FG+I E + D S + + F F+TF +
Sbjct: 45 EAAHDPGKMFIGGLSWQTAPEGLREYFSKFGDITEVMVMKDPSTRRSRGFGFVTFSDPAS 104
Query: 239 VIDLLKNPKQKINDKEVDVKKATPK 263
V +L N +++ K++D K A PK
Sbjct: 105 VDKVLANGPHELDGKKIDPKIAFPK 129
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 31/43 (72%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
E L+E+FSK+G+I V + DP+T RSRGF F+ F D S++K
Sbjct: 65 EGLREYFSKFGDITEVMVMKDPSTRRSRGFGFVTFSDPASVDK 107
Score = 40.0 bits (92), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 35/60 (58%), Gaps = 2/60 (3%)
Query: 452 YDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKP--EPFGVRGGRGG 509
+DK ++ + F F+TFE+E VV + + +IN+K V+ KKA PK P V GRG
Sbjct: 173 FDKQTNRHRGFGFVTFENEDVVDKVCEIHFHEINNKMVECKKAQPKEVMMPNNVARGRGA 232
>gi|29124621|gb|AAH48898.1| Heterogeneous nuclear ribonucleoprotein A/B [Danio rerio]
Length = 340
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 60/135 (44%), Positives = 88/135 (65%), Gaps = 9/135 (6%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++LK+ FSK+GE+ + T+K DPNTGRSRGF FI+FK E + V+ V+A+ H ++ +
Sbjct: 83 KDLKDCFSKFGEVTDCTIKMDPNTGRSRGFGFILFK-----EPSGVDKVLAQKEHRLDGR 137
Query: 174 KIEAKKAKAKS----GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFC 229
+I+ KKA A KIFVGGL+PE +E I+ +F FG I E+P D ++R+ F
Sbjct: 138 QIDPKKAMAMKKEPVKKIFVGGLNPETTEERIREYFGAFGEIETIELPMDPKSNKRRGFV 197
Query: 230 FITFEHESVVIDLLK 244
FITF+ E V +L+
Sbjct: 198 FITFKEEEAVKKILE 212
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 59/102 (57%), Gaps = 1/102 (0%)
Query: 166 GNHVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQR 225
G+ + +I+A K + +GK+FVGGLS + +++K F++FG + + + D + +
Sbjct: 50 GDDGADGGQIDASKGEEDAGKMFVGGLSWDTSKKDLKDCFSKFGEVTDCTIKMDPNTGRS 109
Query: 226 KNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATP-KPEP 266
+ F FI F+ S V +L + +++ +++D KKA K EP
Sbjct: 110 RGFGFILFKEPSGVDKVLAQKEHRLDGRQIDPKKAMAMKKEP 151
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 36/47 (76%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D ++LK+ FSK+GE+ + T+K DPNTGRSRGF FI+FK+ ++K
Sbjct: 79 DTSKKDLKDCFSKFGEVTDCTIKMDPNTGRSRGFGFILFKEPSGVDK 125
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
G+ + TEE ++E+F +GEIE + L DP + + RGF FI FK+ E+++K
Sbjct: 159 GLNPETTEERIREYFGAFGEIETIELPMDPKSNKRRGFVFITFKEEEAVKK 209
>gi|395816803|ref|XP_003781879.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like [Otolemur
garnettii]
Length = 532
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 100/169 (59%), Gaps = 11/169 (6%)
Query: 115 ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNKK 174
+L E+ S++GE+ + +K+DP +GRSRGF F++FKD ASV+ V+ H ++ K
Sbjct: 125 DLTEYLSRFGEVVDCIIKTDPVSGRSRGFGFVLFKDA-----ASVDKVLELKEHKLDGKL 179
Query: 175 IEAKKAKA-----KSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFC 229
I+ ++AK K+FVGGLSP+ E+IK +F FG I E+P D+ ++R+ FC
Sbjct: 180 IDPQRAKPLKEKEPPKKVFVGGLSPDTSKEQIKDYFGAFGEIENIELPRDRKTNERRGFC 239
Query: 230 FITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGVRGGRGGRGG 278
F+T+ V LL++ I + ++K A PK E + + +GG+G
Sbjct: 240 FVTYTEGEPVKKLLESRYHHIGSGKCEIKVAQPK-EVYRQQQQKGGKGA 287
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 34/47 (72%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D +L E+ S++GE+ + +K+DP +GRSRGF F++FKD S++K
Sbjct: 120 DTSKRDLTEYLSRFGEVVDCIIKTDPVSGRSRGFGFVLFKDAASVDK 166
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 58/110 (52%), Gaps = 2/110 (1%)
Query: 158 SVEDVIAEGN--HVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETE 215
++ED+ GN KI A K + GK+F+GGLS + ++ + ++FG +++
Sbjct: 81 TMEDMSEVGNIEEFAEGSKINASKDQQTDGKMFIGGLSWDTSKRDLTEYLSRFGEVVDCI 140
Query: 216 MPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE 265
+ D + + F F+ F+ + V +L+ + K++ K +D ++A P E
Sbjct: 141 IKTDPVSGRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPQRAKPLKE 190
Score = 46.2 bits (108), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 39/70 (55%), Gaps = 5/70 (7%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
E++K++F +GEIEN+ L D T RGF F+ + + E ++K ++ H I +
Sbjct: 209 EQIKDYFGAFGEIENIELPRDRKTNERRGFCFVTYTEGEPVKK-----LLESRYHHIGSG 263
Query: 174 KIEAKKAKAK 183
K E K A+ K
Sbjct: 264 KCEIKVAQPK 273
Score = 43.5 bits (101), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 29/47 (61%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D E++K++F +GEIEN+ L D T RGF F+ + + E ++K
Sbjct: 205 DTSKEQIKDYFGAFGEIENIELPRDRKTNERRGFCFVTYTEGEPVKK 251
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGV 503
EI E+P D+ ++R+ FCF+T+ V LL++ I + ++K A PK E +
Sbjct: 220 EIENIELPRDRKTNERRGFCFVTYTEGEPVKKLLESRYHHIGSGKCEIKVAQPK-EVYRQ 278
Query: 504 RGGRGGRGG 512
+ +GG+G
Sbjct: 279 QQQKGGKGA 287
>gi|158296251|ref|XP_001688945.1| AGAP006656-PB [Anopheles gambiae str. PEST]
gi|157016421|gb|EDO63951.1| AGAP006656-PB [Anopheles gambiae str. PEST]
Length = 327
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 65/158 (41%), Positives = 94/158 (59%), Gaps = 14/158 (8%)
Query: 115 ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNKK 174
L+++FSK+GEI V + DP T RSRGF FI F D ASV+ V+A G H ++ KK
Sbjct: 1 SLRDYFSKFGEITEVMVMKDPTTRRSRGFGFITFGD-----PASVDKVLAHGTHELDGKK 55
Query: 175 IEAK---------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQR 225
I+ K K ++ KIFVGGLS E++K++F QFG I + + +DK ++
Sbjct: 56 IDPKVAFPRRAHPKMVTRTKKIFVGGLSAPTTLEDVKSYFEQFGPIEDAMLMFDKQTNRH 115
Query: 226 KNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ F F+TF+ E VV + + +IN+K V+ KKA PK
Sbjct: 116 RGFGFVTFQSEDVVDKVCEIHFHEINNKMVECKKAQPK 153
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 29/42 (69%)
Query: 609 ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
L+++FSK+GEI V + DP T RSRGF FI F D S++K
Sbjct: 1 SLRDYFSKFGEITEVMVMKDPTTRRSRGFGFITFGDPASVDK 42
>gi|189441636|gb|AAI67421.1| LOC734098 protein [Xenopus (Silurana) tropicalis]
Length = 254
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 60/135 (44%), Positives = 89/135 (65%), Gaps = 9/135 (6%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++LK++FSK+GE+ + T+K DPNTGRSRGF FI+FKD ASV+ V+ + H ++ +
Sbjct: 66 KDLKDYFSKFGEVSDCTIKMDPNTGRSRGFGFILFKDA-----ASVDKVLEQKEHRLDGR 120
Query: 174 KIEAKKAKAKS----GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFC 229
I+ KKA A KIFVGGL+PE +++I+ +F FG I E+P D ++R+ F
Sbjct: 121 LIDPKKAMAMKKDPIKKIFVGGLNPEAGEDKIREYFETFGEIEAIELPMDPKTNKRRGFV 180
Query: 230 FITFEHESVVIDLLK 244
FITF+ E V +L+
Sbjct: 181 FITFKEEEPVKKILE 195
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 38/48 (79%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
D ++LK++FSK+GE+ + T+K DPNTGRSRGF FI+FKD S++K
Sbjct: 62 DTSKKDLKDYFSKFGEVSDCTIKMDPNTGRSRGFGFILFKDAASVDKV 109
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 61/109 (55%)
Query: 152 ESLEKASVEDVIAEGNHVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNI 211
E+ + + E + G + +I A K + +GK+FVGGLS + +++K +F++FG +
Sbjct: 19 EACDAEAAESKVPGGQNGAEGDQINASKGEEDAGKMFVGGLSWDTSKKDLKDYFSKFGEV 78
Query: 212 IETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKA 260
+ + D + + + F FI F+ + V +L+ + +++ + +D KKA
Sbjct: 79 SDCTIKMDPNTGRSRGFGFILFKDAASVDKVLEQKEHRLDGRLIDPKKA 127
Score = 47.0 bits (110), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 30/43 (69%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
++++E+F +GEIE + L DP T + RGF FI FK+ E ++K
Sbjct: 150 DKIREYFETFGEIEAIELPMDPKTNKRRGFVFITFKEEEPVKK 192
>gi|432878673|ref|XP_004073373.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B-like
[Oryzias latipes]
Length = 330
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 61/153 (39%), Positives = 93/153 (60%), Gaps = 9/153 (5%)
Query: 115 ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNKK 174
+LK++FSK+GE+ + T+K D TGRSRGF FI+FKD ASV+ V+ + H ++ ++
Sbjct: 87 DLKDYFSKFGEVTDCTIKMDQQTGRSRGFGFILFKDA-----ASVDKVLEQKEHRLDGRQ 141
Query: 175 IEAKKAKAKS----GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCF 230
I+ K+A A KIFVGGL P++ EEI+ +F FG I E+P D +R+ F F
Sbjct: 142 IDPKRAMAMKKEIVKKIFVGGLKPDLSKEEIEEYFGAFGEIETIELPQDPKTEKRRGFVF 201
Query: 231 ITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
IT++ E V +L+ + + ++K A PK
Sbjct: 202 ITYKEEPSVKKVLEKKYHTVGGSKCEIKIAQPK 234
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 55/87 (63%)
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
+I+A K + +GK+FVGGLS + +++K +F++FG + + + D+ + + F FI F
Sbjct: 61 QIDASKGEEDAGKMFVGGLSWDTSKKDLKDYFSKFGEVTDCTIKMDQQTGRSRGFGFILF 120
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKA 260
+ + V +L+ + +++ +++D K+A
Sbjct: 121 KDAASVDKVLEQKEHRLDGRQIDPKRA 147
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 36/47 (76%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D ++LK++FSK+GE+ + T+K D TGRSRGF FI+FKD S++K
Sbjct: 82 DTSKKDLKDYFSKFGEVTDCTIKMDQQTGRSRGFGFILFKDAASVDK 128
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 10/71 (14%)
Query: 590 VEAKNKMVSHPGIVDKI----------TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAF 639
++ K M IV KI EE++E+F +GEIE + L DP T + RGF F
Sbjct: 142 IDPKRAMAMKKEIVKKIFVGGLKPDLSKEEIEEYFGAFGEIETIELPQDPKTEKRRGFVF 201
Query: 640 IVFKDTESLEK 650
I +K+ S++K
Sbjct: 202 ITYKEEPSVKK 212
>gi|294460252|gb|ADE75708.1| unknown [Picea sitchensis]
Length = 396
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 70/202 (34%), Positives = 109/202 (53%), Gaps = 24/202 (11%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
GI +E+ LK++F YG++ +V + D TGR+RGF F+VF D SV D + +
Sbjct: 12 GISWDTSEDRLKDYFGNYGQVVDVVIMKDRTTGRARGFGFVVFGDP------SVADRVIQ 65
Query: 166 GNHVINNKKIEAKK----------------AKAKSGKIFVGGLSPEMKDEEIKAHFAQFG 209
H I+ + +EAK+ A ++ KIFVGGL+P + +++ + +F QFG
Sbjct: 66 EKHTIDGRAVEAKRVVPRDEQQNVQRTSNMAGPRTKKIFVGGLAPTVTEDDFRKYFEQFG 125
Query: 210 NIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGV 269
NI + + YD + + + F FIT++ E V +L+ ++ +K V+VK+A PK G
Sbjct: 126 NITDVVVMYDHTTQRHRGFGFITYDSEDAVDKVLQQTFHQLKEKTVEVKRAIPKDMSPGN 185
Query: 270 RGGRGGRGGRGGRGGRMAGGYG 291
G GRG G M GGYG
Sbjct: 186 TRGSAGRGASYGA-PYMQGGYG 206
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GKIF+GG+S + ++ +K +F +G +++ + D++ + + F F+ F SV +++
Sbjct: 6 GKIFIGGISWDTSEDRLKDYFGNYGQVVDVVIMKDRTTGRARGFGFVVFGDPSVADRVIQ 65
Query: 245 NPKQKINDKEVDVKKATPKPE 265
K I+ + V+ K+ P+ E
Sbjct: 66 E-KHTIDGRAVEAKRVVPRDE 85
Score = 47.0 bits (110), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 29/47 (61%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D + LK++F YG++ +V + D TGR+RGF F+VF D ++
Sbjct: 16 DTSEDRLKDYFGNYGQVVDVVIMKDRTTGRARGFGFVVFGDPSVADR 62
Score = 42.4 bits (98), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGV 503
I + + YD + + + F FIT++ E V +L+ ++ +K V+VK+A PK G
Sbjct: 126 NITDVVVMYDHTTQRHRGFGFITYDSEDAVDKVLQQTFHQLKEKTVEVKRAIPKDMSPGN 185
Query: 504 RGGRGGRGGRGGRGGRMAGGYG 525
G GRG G M GGYG
Sbjct: 186 TRGSAGRGASYGA-PYMQGGYG 206
>gi|345322713|ref|XP_001506312.2| PREDICTED: RNA-binding protein Musashi homolog 2-like
[Ornithorhynchus anatinus]
Length = 251
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 77/206 (37%), Positives = 112/206 (54%), Gaps = 23/206 (11%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+ L+++FSK+GEI + DP T RSRGF F+ F D ASV+ V+A+ +H +++K
Sbjct: 31 DSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFAD-----PASVDKVLAQPHHELDSK 85
Query: 174 KIEAK---------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQ 224
I+ K K ++ KIFVGGLS E++K +F QFG + + + +DK+ ++
Sbjct: 86 TIDPKVAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNR 145
Query: 225 RKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE--PFGVRGGRGGRGGRGGR 282
+ F F+TFE+E VV + + +IN+K V+ KKA PK P G RG RG
Sbjct: 146 HRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMFPPGTRG--RARGLPYTM 203
Query: 283 GGRMAG-GYGGY----GGYGGGYGGI 303
M G G GY YG GY G
Sbjct: 204 DAFMLGMGMLGYPNFVATYGRGYPGF 229
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 44/72 (61%), Gaps = 5/72 (6%)
Query: 112 ITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVIN 171
+ E++K++F ++G++E+ L D T R RGF F+ F++ + +EK V H IN
Sbjct: 118 VVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEK-----VCEIHFHEIN 172
Query: 172 NKKIEAKKAKAK 183
NK +E KKA+ K
Sbjct: 173 NKMVECKKAQPK 184
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 47/82 (57%)
Query: 182 AKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVID 241
+ S K+F+GGLS + + ++ +F++FG I E + D + + + F F+TF + V
Sbjct: 14 SSSSKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDK 73
Query: 242 LLKNPKQKINDKEVDVKKATPK 263
+L P +++ K +D K A P+
Sbjct: 74 VLAQPHHELDSKTIDPKVAFPR 95
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
+ L+++FSK+GEI + DP T RSRGF F+ F D S++K
Sbjct: 31 DSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKV 74
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 38/57 (66%), Gaps = 2/57 (3%)
Query: 603 VDKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFY 659
+ + E++K++F ++G++E+ L D T R RGF F+ F++ + +EK V +++F+
Sbjct: 115 ANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEK--VCEIHFH 169
Score = 44.3 bits (103), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 53/108 (49%), Gaps = 9/108 (8%)
Query: 452 YDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE--PFGVRGGRGG 509
+DK+ ++ + F F+TFE+E VV + + +IN+K V+ KKA PK P G RG
Sbjct: 139 FDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMFPPGTRG--RA 196
Query: 510 RGGRGGRGGRMAG-GYGGY----GGYGGGYGELDYLQLWQFFDWISSS 552
RG M G G GY YG GY +QF D++ S
Sbjct: 197 RGLPYTMDAFMLGMGMLGYPNFVATYGRGYPGFAPSYSYQFPDYLPIS 244
>gi|158296255|ref|XP_001688946.1| AGAP006656-PA [Anopheles gambiae str. PEST]
gi|157016423|gb|EDO63952.1| AGAP006656-PA [Anopheles gambiae str. PEST]
Length = 237
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 65/157 (41%), Positives = 94/157 (59%), Gaps = 14/157 (8%)
Query: 116 LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNKKI 175
L+++FSK+GEI V + DP T RSRGF FI F D ASV+ V+A G H ++ KKI
Sbjct: 2 LRDYFSKFGEITEVMVMKDPTTRRSRGFGFITFGD-----PASVDKVLAHGTHELDGKKI 56
Query: 176 EAK---------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRK 226
+ K K ++ KIFVGGLS E++K++F QFG I + + +DK ++ +
Sbjct: 57 DPKVAFPRRAHPKMVTRTKKIFVGGLSAPTTLEDVKSYFEQFGPIEDAMLMFDKQTNRHR 116
Query: 227 NFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
F F+TF+ E VV + + +IN+K V+ KKA PK
Sbjct: 117 GFGFVTFQSEDVVDKVCEIHFHEINNKMVECKKAQPK 153
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 29/42 (69%)
Query: 610 LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
L+++FSK+GEI V + DP T RSRGF FI F D S++K
Sbjct: 2 LRDYFSKFGEITEVMVMKDPTTRRSRGFGFITFGDPASVDKV 43
>gi|259013338|ref|NP_001158364.1| musashi homolog 2 [Saccoglossus kowalevskii]
gi|32307763|gb|AAP79278.1| musashi nrp-1 [Saccoglossus kowalevskii]
Length = 394
Score = 115 bits (288), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 75/203 (36%), Positives = 107/203 (52%), Gaps = 26/203 (12%)
Query: 116 LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNKKI 175
L+E+FSK+GE+ + D T RSRGF FI F+D ASVE V+A+ H ++ KKI
Sbjct: 37 LREYFSKFGEVTECMVMRDQATKRSRGFGFITFRD-----PASVEKVLAQAAHELDQKKI 91
Query: 176 EAKKAKAK--------SGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKN 227
+ K A K + KIFVGGLS ++IK HF+Q+G + E ++ +DK ++ +
Sbjct: 92 DPKVAFPKRSHPKVTRTKKIFVGGLSANTTADDIKNHFSQYGKVEEAQLMFDKQTNRHRG 151
Query: 228 FCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK-----------PEPFGVRGGRGGR 276
F F+TF+ E VV + + ++N K V+ KKA PK P F V
Sbjct: 152 FGFVTFDSEDVVDKICEIHFHEVNSKMVECKKAQPKEVMFQGALARDPTYFAVYPPNFAA 211
Query: 277 GGRG--GRGGRMAGGYGGYGGYG 297
GRG G A + G+ GYG
Sbjct: 212 YGRGFPGYAPGFAYPFPGFPGYG 234
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 47/79 (59%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GK+F+GGLS + + ++ +F++FG + E + D++ + + F FITF + V +L
Sbjct: 21 GKMFIGGLSWQTTPDGLREYFSKFGEVTECMVMRDQATKRSRGFGFITFRDPASVEKVLA 80
Query: 245 NPKQKINDKEVDVKKATPK 263
+++ K++D K A PK
Sbjct: 81 QAAHELDQKKIDPKVAFPK 99
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 48/85 (56%), Gaps = 6/85 (7%)
Query: 109 VHKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNH 168
+ +++K HFS+YG++E L D T R RGF F+ F D+E + V+ + H
Sbjct: 118 ANTTADDIKNHFSQYGKVEEAQLMFDKQTNRHRGFGFVTF-DSEDV----VDKICEIHFH 172
Query: 169 VINNKKIEAKKAKAKSGKIFVGGLS 193
+N+K +E KKA+ K +F G L+
Sbjct: 173 EVNSKMVECKKAQPKE-VMFQGALA 196
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 28/41 (68%)
Query: 610 LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
L+E+FSK+GE+ + D T RSRGF FI F+D S+EK
Sbjct: 37 LREYFSKFGEVTECMVMRDQATKRSRGFGFITFRDPASVEK 77
Score = 43.9 bits (102), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Query: 603 VDKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFY 659
+ +++K HFS+YG++E L D T R RGF F+ F + ++K + +++F+
Sbjct: 118 ANTTADDIKNHFSQYGKVEEAQLMFDKQTNRHRGFGFVTFDSEDVVDK--ICEIHFH 172
Score = 39.7 bits (91), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 47/101 (46%), Gaps = 13/101 (12%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK------ 497
++ E ++ +DK ++ + F F+TF+ E VV + + ++N K V+ KKA PK
Sbjct: 134 KVEEAQLMFDKQTNRHRGFGFVTFDSEDVVDKICEIHFHEVNSKMVECKKAQPKEVMFQG 193
Query: 498 -----PEPFGVRGGRGGRGGRG--GRGGRMAGGYGGYGGYG 531
P F V GRG G A + G+ GYG
Sbjct: 194 ALARDPTYFAVYPPNFAAYGRGFPGYAPGFAYPFPGFPGYG 234
>gi|340914891|gb|EGS18232.1| hypothetical protein CTHT_0062490 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 700
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 111/204 (54%), Gaps = 10/204 (4%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
E L+ +FS++GE+ T+ D TGRSRGF F+ FKD + + V++ +G +I+ K
Sbjct: 239 ESLRNYFSQFGEVVECTVMRDSATGRSRGFGFLTFKDPKVVNIVMVKEHYLDGK-IIDPK 297
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
+ + + K+ KIFVGG+SPE D E + +F+QFG +++ + DK + + F F+TF
Sbjct: 298 RAIPRDEQEKTSKIFVGGVSPETTDHEFREYFSQFGRVVDATLMMDKDTGRPRGFGFVTF 357
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGVRGGRGGRGGRGGRGGRMAGGYG-- 291
E E+ V L N K +++ K ++VKKA P+ +R R G+ GR G+ GG
Sbjct: 358 ESEAGVEACL-NAKLELHGKPIEVKKAQPRGN---LRDDEDARRGKFGRKGQGIGGIDDA 413
Query: 292 ---GYGGYGGGYGGILYKPLLFYE 312
G GG G P L +
Sbjct: 414 LNTGMGGMAGMSAAAGMTPQLMAQ 437
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 54/86 (62%), Gaps = 1/86 (1%)
Query: 180 AKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVV 239
A A + K+F+GGL+ E DE ++ +F+QFG ++E + D + + + F F+TF+ + V
Sbjct: 220 AIAIAKKMFIGGLNWETTDESLRNYFSQFGEVVECTVMRDSATGRSRGFGFLTFK-DPKV 278
Query: 240 IDLLKNPKQKINDKEVDVKKATPKPE 265
++++ + ++ K +D K+A P+ E
Sbjct: 279 VNIVMVKEHYLDGKIIDPKRAIPRDE 304
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 32/51 (62%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYF 658
E L+ +FS++GE+ T+ D TGRSRGF F+ FKD + + V++ Y
Sbjct: 239 ESLRNYFSQFGEVVECTVMRDSATGRSRGFGFLTFKDPKVVNIVMVKEHYL 289
Score = 43.9 bits (102), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 601 GIVDKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLE 649
G+ + T+ E +E+FS++G + + TL D +TGR RGF F+ F+ +E
Sbjct: 315 GVSPETTDHEFREYFSQFGRVVDATLMMDKDTGRPRGFGFVTFESEAGVE 364
Score = 39.7 bits (91), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 9/93 (9%)
Query: 445 IIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGVR 504
+++ + DK + + F F+TFE E+ V L N K +++ K ++VKKA P+ +R
Sbjct: 335 VVDATLMMDKDTGRPRGFGFVTFESEAGVEACL-NAKLELHGKPIEVKKAQPRGN---LR 390
Query: 505 GGRGGRGGRGGRGGRMAGGYG-----GYGGYGG 532
R G+ GR G+ GG G GG G
Sbjct: 391 DDEDARRGKFGRKGQGIGGIDDALNTGMGGMAG 423
>gi|351709446|gb|EHB12365.1| Heterogeneous nuclear ribonucleoprotein D0 [Heterocephalus glaber]
Length = 271
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/155 (40%), Positives = 96/155 (61%), Gaps = 10/155 (6%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++LK+ FSK+GE+ + TLK DP TGRSRGF F++ K++ES++K V+ + H +N K
Sbjct: 121 KDLKDCFSKFGEVVDCTLKLDPITGRSRGFGFVLLKESESVDK-----VMDQKEHKLNGK 175
Query: 174 KIEAKKAKAKS-----GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNF 228
I+ K+AKA KIFVGGLSP+ +E I+ +F FG + E+P D ++R+ F
Sbjct: 176 VIDPKRAKAMKTKEPVKKIFVGGLSPDTPEENIREYFGGFGEVESIELPMDNKTNKRRGF 235
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
CFITF+ E V +++ + + ++K A K
Sbjct: 236 CFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSK 270
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 37/48 (77%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
D ++LK+ FSK+GE+ + TLK DP TGRSRGF F++ K++ES++K
Sbjct: 117 DTTKKDLKDCFSKFGEVVDCTLKLDPITGRSRGFGFVLLKESESVDKV 164
Score = 43.5 bits (101), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 30/47 (63%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D E ++E+F +GE+E++ L D T + RGF FI FK+ E ++K
Sbjct: 202 DTPEENIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 248
Score = 43.1 bits (100), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 45/81 (55%)
Query: 180 AKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVV 239
A+ + K+F+GGLS + +++K F++FG +++ + D + + F F+ + V
Sbjct: 102 AQREEWKMFMGGLSWDTTKKDLKDCFSKFGEVVDCTLKLDPITGRSRGFGFVLLKESESV 161
Query: 240 IDLLKNPKQKINDKEVDVKKA 260
++ + K+N K +D K+A
Sbjct: 162 DKVMDQKEHKLNGKVIDPKRA 182
>gi|348508132|ref|XP_003441609.1| PREDICTED: RNA-binding protein Musashi homolog 1-like isoform 2
[Oreochromis niloticus]
Length = 363
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/256 (32%), Positives = 129/256 (50%), Gaps = 30/256 (11%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + T+E LKE+F K+GE++ + DP T RSRGF F+ + E+A VE V+A+
Sbjct: 28 GLSWQTTQEGLKEYFCKFGEVKECMVMRDPVTKRSRGFGFVTYA-----EQAGVEKVLAQ 82
Query: 166 GNHVINNKKIEAK---------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEM 216
H +++K I+ K K ++ KIFVGGLS E++K +F QFG + + +
Sbjct: 83 NRHELDSKTIDPKVAFPRRAQPKLVTRTKKIFVGGLSVNTTIEDVKQYFDQFGKVDDAML 142
Query: 217 PYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKP--EPFGVRGGRG 274
+DK+ ++ + F F+TFE+E VV + + +IN+K V+ KKA PK P G GR
Sbjct: 143 MFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMTPTGSARGRS 202
Query: 275 GRGGRGGRGGRMAGGYGGYGGYGGG------YGGILYKPLLFYELNELGISGRSLVCRTG 328
G + G GY G+ Y GI P Y+ E + L+ +
Sbjct: 203 RVMPYGMDAFMLGIGMLGYPGFQTATYTSRSYSGI--APGYTYQFPEFHLERTPLLTSSH 260
Query: 329 PMVQATPPLAEVDVTG 344
P P LA + +T
Sbjct: 261 P-----PELAAIPLTA 271
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 44/78 (56%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+F+GGLS + E +K +F +FG + E + D + + F F+T+ ++ V +L
Sbjct: 23 KMFIGGLSWQTTQEGLKEYFCKFGEVKECMVMRDPVTKRSRGFGFVTYAEQAGVEKVLAQ 82
Query: 246 PKQKINDKEVDVKKATPK 263
+ +++ K +D K A P+
Sbjct: 83 NRHELDSKTIDPKVAFPR 100
Score = 46.2 bits (108), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVED 655
G+ + T+E LKE+F K+GE++ + DP T RSRGF F+ + + +EK ++
Sbjct: 28 GLSWQTTQEGLKEYFCKFGEVKECMVMRDPVTKRSRGFGFVTYAEQAGVEKVLAQN 83
Score = 43.9 bits (102), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 38/57 (66%), Gaps = 2/57 (3%)
Query: 603 VDKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFY 659
V+ E++K++F ++G++++ L D T R RGF F+ F++ + +EK V +++F+
Sbjct: 120 VNTTIEDVKQYFDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEK--VCEIHFH 174
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 452 YDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKP--EPFGVRGGRGG 509
+DK+ ++ + F F+TFE+E VV + + +IN+K V+ KKA PK P G GR
Sbjct: 144 FDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMTPTGSARGRSR 203
Query: 510 RGGRGGRGGRMAGGYGGYGGY 530
G + G GY G+
Sbjct: 204 VMPYGMDAFMLGIGMLGYPGF 224
>gi|313240275|emb|CBY32620.1| unnamed protein product [Oikopleura dioica]
Length = 331
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/151 (36%), Positives = 93/151 (61%), Gaps = 5/151 (3%)
Query: 113 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINN 172
TE L+ +F +G + + ++K D T +SRGF FI+F+D ASV+ V+A H+++
Sbjct: 69 TESLRTYFESFGALRDASVKIDTMTQQSRGFGFILFEDA-----ASVDAVMATPEHILDG 123
Query: 173 KKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFIT 232
KKI+ KKA+ + GK+FVGG+ E D+ IK +F ++G + + P DK+ K FCF+T
Sbjct: 124 KKIDPKKAERRDGKMFVGGILAETTDQTIKDYFGKYGEVEAVDRPVDKATGNYKGFCFVT 183
Query: 233 FEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
F+ + V+ + ++ +I+ K + K+ PK
Sbjct: 184 FKRDGVMKTVCRDRYHEIDGKRCETKEGVPK 214
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 41/75 (54%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+FVGGLS E ++ +F FG + + + D Q + F FI FE + V ++
Sbjct: 57 KMFVGGLSRSTTTESLRTYFESFGALRDASVKIDTMTQQSRGFGFILFEDAASVDAVMAT 116
Query: 246 PKQKINDKEVDVKKA 260
P+ ++ K++D KKA
Sbjct: 117 PEHILDGKKIDPKKA 131
Score = 42.0 bits (97), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 29/43 (67%)
Query: 607 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLE 649
TE L+ +F +G + + ++K D T +SRGF FI+F+D S++
Sbjct: 69 TESLRTYFESFGALRDASVKIDTMTQQSRGFGFILFEDAASVD 111
Score = 40.8 bits (94), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFK 643
GI+ + T++ +K++F KYGE+E V D TG +GF F+ FK
Sbjct: 142 GILAETTDQTIKDYFGKYGEVEAVDRPVDKATGNYKGFCFVTFK 185
Score = 39.3 bits (90), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 30/54 (55%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 497
E+ + P DK+ K FCF+TF+ + V+ + ++ +I+ K + K+ PK
Sbjct: 161 EVEAVDRPVDKATGNYKGFCFVTFKRDGVMKTVCRDRYHEIDGKRCETKEGVPK 214
>gi|313214667|emb|CBY40970.1| unnamed protein product [Oikopleura dioica]
Length = 328
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/151 (36%), Positives = 93/151 (61%), Gaps = 5/151 (3%)
Query: 113 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINN 172
TE L+ +F +G + + ++K D T +SRGF FI+F+D ASV+ V+A H+++
Sbjct: 69 TESLRTYFESFGALRDASVKIDTMTQQSRGFGFILFEDA-----ASVDAVMATPEHILDG 123
Query: 173 KKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFIT 232
KKI+ KKA+ + GK+FVGG+ E D+ IK +F ++G + + P DK+ K FCF+T
Sbjct: 124 KKIDPKKAERRDGKMFVGGILAETTDQTIKDYFGKYGEVEAVDRPVDKATGNYKGFCFVT 183
Query: 233 FEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
F+ + V+ + ++ +I+ K + K+ PK
Sbjct: 184 FKRDGVMKTVCRDRYHEIDGKRCETKEGVPK 214
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 41/75 (54%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+FVGGLS E ++ +F FG + + + D Q + F FI FE + V ++
Sbjct: 57 KMFVGGLSRSTTTESLRTYFESFGALRDASVKIDTMTQQSRGFGFILFEDAASVDAVMAT 116
Query: 246 PKQKINDKEVDVKKA 260
P+ ++ K++D KKA
Sbjct: 117 PEHILDGKKIDPKKA 131
Score = 42.0 bits (97), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 29/43 (67%)
Query: 607 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLE 649
TE L+ +F +G + + ++K D T +SRGF FI+F+D S++
Sbjct: 69 TESLRTYFESFGALRDASVKIDTMTQQSRGFGFILFEDAASVD 111
Score = 40.8 bits (94), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFK 643
GI+ + T++ +K++F KYGE+E V D TG +GF F+ FK
Sbjct: 142 GILAETTDQTIKDYFGKYGEVEAVDRPVDKATGNYKGFCFVTFK 185
Score = 39.3 bits (90), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 30/54 (55%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 497
E+ + P DK+ K FCF+TF+ + V+ + ++ +I+ K + K+ PK
Sbjct: 161 EVEAVDRPVDKATGNYKGFCFVTFKRDGVMKTVCRDRYHEIDGKRCETKEGVPK 214
>gi|449479911|ref|XP_004177058.1| PREDICTED: RNA-binding protein Musashi homolog 2 isoform 2
[Taeniopygia guttata]
Length = 251
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/206 (37%), Positives = 112/206 (54%), Gaps = 23/206 (11%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+ L+++FSK+GEI + DP T RSRGF F+ F D ASV+ V+A+ +H +++K
Sbjct: 31 DSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFAD-----PASVDKVLAQPHHELDSK 85
Query: 174 KIEAK---------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQ 224
I+ K K ++ KIFVGGLS E++K +F QFG + + + +DK+ ++
Sbjct: 86 TIDPKVAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNR 145
Query: 225 RKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE--PFGVRGGRGGRGGRGGR 282
+ F F+TFE+E VV + + +IN+K V+ KKA PK P G RG RG
Sbjct: 146 HRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMFPPGTRG--RARGLPYTM 203
Query: 283 GGRMAG-GYGGY----GGYGGGYGGI 303
M G G GY YG GY G
Sbjct: 204 DAFMLGMGMLGYPNFVATYGRGYPGF 229
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 59/116 (50%), Gaps = 12/116 (10%)
Query: 75 VSCSHHYYLFDQILRTHFFYIMEAKNKMVSHPGIV-------HKITEELKEHFSKYGEIE 127
V H+ L + + + A+ KMV+ + + + E++K++F ++G++E
Sbjct: 74 VLAQPHHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVE 133
Query: 128 NVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNKKIEAKKAKAK 183
+ L D T R RGF F+ F++ + +EK V H INNK +E KKA+ K
Sbjct: 134 DAMLMFDKTTNRHRGFGFVTFENEDVVEK-----VCEIHFHEINNKMVECKKAQPK 184
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 47/82 (57%)
Query: 182 AKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVID 241
+ S K+F+GGLS + + ++ +F++FG I E + D + + + F F+TF + V
Sbjct: 14 SPSSKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDK 73
Query: 242 LLKNPKQKINDKEVDVKKATPK 263
+L P +++ K +D K A P+
Sbjct: 74 VLAQPHHELDSKTIDPKVAFPR 95
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 30/47 (63%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVE 654
+ L+++FSK+GEI + DP T RSRGF F+ F D S++K +
Sbjct: 31 DSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLAQ 77
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 52/98 (53%), Gaps = 9/98 (9%)
Query: 569 VSCSHYHYLFDQNLRTHYFYIVEAKNKMVSHPGIV-------DKITEELKEHFSKYGEIE 621
V +H L + + + A+ KMV+ + + + E++K++F ++G++E
Sbjct: 74 VLAQPHHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVE 133
Query: 622 NVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFY 659
+ L D T R RGF F+ F++ + +EK V +++F+
Sbjct: 134 DAMLMFDKTTNRHRGFGFVTFENEDVVEK--VCEIHFH 169
Score = 43.9 bits (102), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 53/108 (49%), Gaps = 9/108 (8%)
Query: 452 YDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE--PFGVRGGRGG 509
+DK+ ++ + F F+TFE+E VV + + +IN+K V+ KKA PK P G RG
Sbjct: 139 FDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMFPPGTRG--RA 196
Query: 510 RGGRGGRGGRMAG-GYGGY----GGYGGGYGELDYLQLWQFFDWISSS 552
RG M G G GY YG GY +QF D++ S
Sbjct: 197 RGLPYTMDAFMLGMGMLGYPNFVATYGRGYPGFAPSYSYQFPDYLPIS 244
>gi|432858970|ref|XP_004069029.1| PREDICTED: RNA-binding protein Musashi homolog 1-like [Oryzias
latipes]
Length = 299
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/250 (32%), Positives = 125/250 (50%), Gaps = 25/250 (10%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + T+E L+E+F K+GE++ + DP T RSRGF F+ + D +A VE V+A+
Sbjct: 5 GLSWQTTQEGLREYFGKFGEVKECMVMRDPVTKRSRGFGFVTYAD-----QAGVEQVLAQ 59
Query: 166 GNHVINNKKIEAK---------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEM 216
H +++K I+ K K ++ KIFVGGLS E++K +F QFG + + +
Sbjct: 60 NRHELDSKTIDPKVAFPRRAQPKLVTRTKKIFVGGLSVNTTIEDVKQYFDQFGKVDDAML 119
Query: 217 PYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKP--EPFGVRGGRG 274
+DK+ ++ + F F+TFE+E VV + + +IN+K V+ KKA PK P G GR
Sbjct: 120 MFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMTPTGSARGRS 179
Query: 275 GRGGRGGRGGRMAGGYGGYGGY------GGGYGGILYKPLLFYELNELGISGRSLVCRTG 328
G + G GY G+ Y GI P Y+ E + L+ +
Sbjct: 180 RVMPYGMDTFMLGIGMLGYPGFQTTTYTSRSYSGI--APGYTYQFPEFHLERTPLLTSSH 237
Query: 329 PMVQATPPLA 338
P PL
Sbjct: 238 PHELTAIPLT 247
Score = 45.8 bits (107), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 43/77 (55%)
Query: 187 IFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNP 246
+F+GGLS + E ++ +F +FG + E + D + + F F+T+ ++ V +L
Sbjct: 1 MFIGGLSWQTTQEGLREYFGKFGEVKECMVMRDPVTKRSRGFGFVTYADQAGVEQVLAQN 60
Query: 247 KQKINDKEVDVKKATPK 263
+ +++ K +D K A P+
Sbjct: 61 RHELDSKTIDPKVAFPR 77
Score = 45.8 bits (107), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 30/48 (62%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVED 655
E L+E+F K+GE++ + DP T RSRGF F+ + D +E+ ++
Sbjct: 13 EGLREYFGKFGEVKECMVMRDPVTKRSRGFGFVTYADQAGVEQVLAQN 60
Score = 43.5 bits (101), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 38/57 (66%), Gaps = 2/57 (3%)
Query: 603 VDKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFY 659
V+ E++K++F ++G++++ L D T R RGF F+ F++ + +EK V +++F+
Sbjct: 97 VNTTIEDVKQYFDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEK--VCEIHFH 151
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 452 YDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKP--EPFGVRGGRGG 509
+DK+ ++ + F F+TFE+E VV + + +IN+K V+ KKA PK P G GR
Sbjct: 121 FDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMTPTGSARGRSR 180
Query: 510 RGGRGGRGGRMAGGYGGYGGY 530
G + G GY G+
Sbjct: 181 VMPYGMDTFMLGIGMLGYPGF 201
>gi|345564567|gb|EGX47528.1| hypothetical protein AOL_s00083g337 [Arthrobotrys oligospora ATCC
24927]
Length = 642
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 96/150 (64%), Gaps = 1/150 (0%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
E L+++FS++GE+ T+ D +GRSRGF F+ FKD +++ V++ +G +I+ K
Sbjct: 172 ESLRDYFSQFGEVSECTVMRDGPSGRSRGFGFLTFKDPKTVNIVMVKEHYLDG-KIIDPK 230
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
+ + + ++ KIFVGG+S E +EE K F QFG +I++ + DK + + F F+TF
Sbjct: 231 RAIPRDEQERTSKIFVGGVSQEASEEEFKNFFMQFGRVIDSTLMIDKETGRPRGFGFVTF 290
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKATPK 263
++E+ V L++P +I DK ++VKKA P+
Sbjct: 291 DNEAAVDLALQHPDLRIRDKPIEVKKAQPR 320
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 53/87 (60%), Gaps = 3/87 (3%)
Query: 180 AKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF-EHESV 238
A + GK+F+GGL+ E DE ++ +F+QFG + E + D + + F F+TF + ++V
Sbjct: 153 AIKEDGKMFIGGLNWETTDESLRDYFSQFGEVSECTVMRDGPSGRSRGFGFLTFKDPKTV 212
Query: 239 VIDLLKNPKQKINDKEVDVKKATPKPE 265
I ++K + ++ K +D K+A P+ E
Sbjct: 213 NIVMVK--EHYLDGKIIDPKRAIPRDE 237
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 34/51 (66%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYF 658
E L+++FS++GE+ T+ D +GRSRGF F+ FKD +++ V++ Y
Sbjct: 172 ESLRDYFSQFGEVSECTVMRDGPSGRSRGFGFLTFKDPKTVNIVMVKEHYL 222
Score = 45.8 bits (107), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 35/53 (66%)
Query: 445 IIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 497
+I++ + DK + + F F+TF++E+ V L++P +I DK ++VKKA P+
Sbjct: 268 VIDSTLMIDKETGRPRGFGFVTFDNEAAVDLALQHPDLRIRDKPIEVKKAQPR 320
>gi|405960558|gb|EKC26474.1| RNA-binding protein Musashi-like protein Rbp6 [Crassostrea gigas]
Length = 281
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/172 (37%), Positives = 100/172 (58%), Gaps = 16/172 (9%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
E LK+HF ++GEI+ + DP T RSRGF F+ +KD ASV+ + G H+++NK
Sbjct: 39 ESLKDHFGRFGEIKEAMVMKDPTTKRSRGFGFVTYKD-----PASVDTCLENGPHILDNK 93
Query: 174 KIEAK---------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQ 224
++ K K ++ KIFVGGLS E++K +F+Q+G I + + +DK+ ++
Sbjct: 94 TVDPKVAFPRKAQPKMVTRTKKIFVGGLSAATTVEDVKNYFSQYGKIEDAMLMFDKTTNR 153
Query: 225 RKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE--PFGVRGGRG 274
+ F F+TFE+E VV + + +IN K V+ KKA PK P + GRG
Sbjct: 154 HRGFGFVTFENEDVVDKVCEIHFHEINKKMVECKKAQPKEVMLPTTLARGRG 205
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 46/79 (58%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GK+F+GGLS + E +K HF +FG I E + D + + + F F+T++ + V L+
Sbjct: 25 GKMFIGGLSWQTTVESLKDHFGRFGEIKEAMVMKDPTTKRSRGFGFVTYKDPASVDTCLE 84
Query: 245 NPKQKINDKEVDVKKATPK 263
N +++K VD K A P+
Sbjct: 85 NGPHILDNKTVDPKVAFPR 103
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 29/42 (69%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLE 649
E LK+HF ++GEI+ + DP T RSRGF F+ +KD S++
Sbjct: 39 ESLKDHFGRFGEIKEAMVMKDPTTKRSRGFGFVTYKDPASVD 80
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 52/92 (56%), Gaps = 9/92 (9%)
Query: 575 HYLFDQNLRTHYFYIVEAKNKMVSHP------GIVDKIT-EELKEHFSKYGEIENVTLKS 627
H L ++ + + +A+ KMV+ G+ T E++K +FS+YG+IE+ L
Sbjct: 88 HILDNKTVDPKVAFPRKAQPKMVTRTKKIFVGGLSAATTVEDVKNYFSQYGKIEDAMLMF 147
Query: 628 DPNTGRSRGFAFIVFKDTESLEKASVEDVYFY 659
D T R RGF F+ F++ + ++K V +++F+
Sbjct: 148 DKTTNRHRGFGFVTFENEDVVDK--VCEIHFH 177
Score = 38.9 bits (89), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE--PF 501
+I + + +DK+ ++ + F F+TFE+E VV + + +IN K V+ KKA PK P
Sbjct: 139 KIEDAMLMFDKTTNRHRGFGFVTFENEDVVDKVCEIHFHEINKKMVECKKAQPKEVMLPT 198
Query: 502 GVRGGRG 508
+ GRG
Sbjct: 199 TLARGRG 205
>gi|410922315|ref|XP_003974628.1| PREDICTED: RNA-binding protein Musashi homolog 1-like isoform 1
[Takifugu rubripes]
Length = 348
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 89/283 (31%), Positives = 137/283 (48%), Gaps = 35/283 (12%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + T+E LKE+F KYGE++ + DP T RSRGF F+ F D +A V+ V+A+
Sbjct: 26 GLSWQTTQEGLKEYFCKYGEVKECMVMRDPVTKRSRGFGFVTFVD-----QAGVDKVLAQ 80
Query: 166 GNHVINNKKIEAK---------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEM 216
H +++K I+ K K ++ KIFVGGLS E++K +F QFG + + +
Sbjct: 81 TRHELDSKTIDPKVAFPRRAQPKLVTRTKKIFVGGLSVNTTIEDVKQYFDQFGKVDDAML 140
Query: 217 PYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKP--EPFGVRGGRG 274
+DK+ ++ + F F+TFE+E VV + + +IN+K V+ KKA PK P G GR
Sbjct: 141 MFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMSPAGSARGRS 200
Query: 275 GRGGRGGRGGRMAGGYGGYGGYGGG------YGGILYKPLLFYELNELGISGRSLVCRTG 328
G + G GY G+ Y GI P Y+ E + RT
Sbjct: 201 RVMPYGMDAFMLGIGMLGYPGFQTATYTSRTYAGI--TPGYTYQFPEFHLE------RTP 252
Query: 329 PMVQATPPLAEVDVTGVIMILLGAKNHNSDENPTSRSHPSQNA 371
+ PP ++T + + G + S PS++A
Sbjct: 253 LLTSPHPP----ELTAIPLTAYGPMAAAAAAAVVRGSTPSRSA 291
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 44/78 (56%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+F+GGLS + E +K +F ++G + E + D + + F F+TF ++ V +L
Sbjct: 21 KMFIGGLSWQTTQEGLKEYFCKYGEVKECMVMRDPVTKRSRGFGFVTFVDQAGVDKVLAQ 80
Query: 246 PKQKINDKEVDVKKATPK 263
+ +++ K +D K A P+
Sbjct: 81 TRHELDSKTIDPKVAFPR 98
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
G+ + T+E LKE+F KYGE++ + DP T RSRGF F+ F D ++K
Sbjct: 26 GLSWQTTQEGLKEYFCKYGEVKECMVMRDPVTKRSRGFGFVTFVDQAGVDK 76
Score = 43.5 bits (101), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 38/57 (66%), Gaps = 2/57 (3%)
Query: 603 VDKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFY 659
V+ E++K++F ++G++++ L D T R RGF F+ F++ + +EK V +++F+
Sbjct: 118 VNTTIEDVKQYFDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEK--VCEIHFH 172
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 452 YDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKP--EPFGVRGGRGG 509
+DK+ ++ + F F+TFE+E VV + + +IN+K V+ KKA PK P G GR
Sbjct: 142 FDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMSPAGSARGRSR 201
Query: 510 RGGRGGRGGRMAGGYGGYGGY 530
G + G GY G+
Sbjct: 202 VMPYGMDAFMLGIGMLGYPGF 222
>gi|410915348|ref|XP_003971149.1| PREDICTED: RNA-binding protein Musashi homolog 2-like isoform 4
[Takifugu rubripes]
Length = 350
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/169 (38%), Positives = 100/169 (59%), Gaps = 16/169 (9%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+ L+++FSK+GEI + DP T RSRGF F+ F D ASV+ V+A+ +H +++K
Sbjct: 35 DSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFTDA-----ASVDKVLAQQHHELDSK 89
Query: 174 KIEAK---------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQ 224
I+ K K ++ KIFVGGLS E++K +F QFG + + + +DK+ ++
Sbjct: 90 TIDPKVAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVDDAMLMFDKTTNR 149
Query: 225 RKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE--PFGVRG 271
+ F FITFE+E +V + + +IN+K V+ KKA PK P G RG
Sbjct: 150 HRGFGFITFENEDIVEKVCEIHFHEINNKMVECKKAQPKEVMFPPGTRG 198
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 59/116 (50%), Gaps = 12/116 (10%)
Query: 75 VSCSHHYYLFDQILRTHFFYIMEAKNKMVSHPGIV-------HKITEELKEHFSKYGEIE 127
V H+ L + + + A+ KMV+ + + + E++K++F ++G+++
Sbjct: 78 VLAQQHHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVD 137
Query: 128 NVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNKKIEAKKAKAK 183
+ L D T R RGF FI F++ + +EK V H INNK +E KKA+ K
Sbjct: 138 DAMLMFDKTTNRHRGFGFITFENEDIVEK-----VCEIHFHEINNKMVECKKAQPK 188
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 45/79 (56%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GK+F+GGLS + + ++ +F++FG I E + D + + + F F+TF + V +L
Sbjct: 21 GKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFTDAASVDKVLA 80
Query: 245 NPKQKINDKEVDVKKATPK 263
+++ K +D K A P+
Sbjct: 81 QQHHELDSKTIDPKVAFPR 99
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 29/43 (67%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+ L+++FSK+GEI + DP T RSRGF F+ F D S++K
Sbjct: 35 DSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFTDAASVDK 77
Score = 45.4 bits (106), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 52/98 (53%), Gaps = 9/98 (9%)
Query: 569 VSCSHYHYLFDQNLRTHYFYIVEAKNKMVSHPGIV-------DKITEELKEHFSKYGEIE 621
V +H L + + + A+ KMV+ + + + E++K++F ++G+++
Sbjct: 78 VLAQQHHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVD 137
Query: 622 NVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFY 659
+ L D T R RGF FI F++ + +EK V +++F+
Sbjct: 138 DAMLMFDKTTNRHRGFGFITFENEDIVEK--VCEIHFH 173
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 35/56 (62%), Gaps = 2/56 (3%)
Query: 452 YDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE--PFGVRG 505
+DK+ ++ + F FITFE+E +V + + +IN+K V+ KKA PK P G RG
Sbjct: 143 FDKTTNRHRGFGFITFENEDIVEKVCEIHFHEINNKMVECKKAQPKEVMFPPGTRG 198
>gi|410922319|ref|XP_003974630.1| PREDICTED: RNA-binding protein Musashi homolog 1-like isoform 3
[Takifugu rubripes]
Length = 363
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 91/288 (31%), Positives = 140/288 (48%), Gaps = 30/288 (10%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + T+E LKE+F KYGE++ + DP T RSRGF F+ F D +A V+ V+A+
Sbjct: 26 GLSWQTTQEGLKEYFCKYGEVKECMVMRDPVTKRSRGFGFVTFVD-----QAGVDKVLAQ 80
Query: 166 GNHVINNKKIEAK---------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEM 216
H +++K I+ K K ++ KIFVGGLS E++K +F QFG + + +
Sbjct: 81 TRHELDSKTIDPKVAFPRRAQPKLVTRTKKIFVGGLSVNTTIEDVKQYFDQFGKVDDAML 140
Query: 217 PYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKP--EPFGVRGGRG 274
+DK+ ++ + F F+TFE+E VV + + +IN+K V+ KKA PK P G GR
Sbjct: 141 MFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMSPAGSARGRS 200
Query: 275 GRGGRGGRGGRMAGGYGGYGGYGGG------YGGILYKPLLFYELNELGISGRSLVCRTG 328
G + G GY G+ Y GI P Y+ E + L+
Sbjct: 201 RVMPYGMDAFMLGIGMLGYPGFQTATYTSRTYAGI--TPGYTYQFPEFHLERTPLLTSPH 258
Query: 329 PMVQATPPLAE---VDVTGVIMILLGAKNHNSDENPT--SRSHPSQNA 371
P PL + ++ G + + SD + S S PS++A
Sbjct: 259 PPELTAIPLTAYGPMAAAAAAAVVRGERTYVSDVSVIMPSGSTPSRSA 306
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 44/78 (56%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+F+GGLS + E +K +F ++G + E + D + + F F+TF ++ V +L
Sbjct: 21 KMFIGGLSWQTTQEGLKEYFCKYGEVKECMVMRDPVTKRSRGFGFVTFVDQAGVDKVLAQ 80
Query: 246 PKQKINDKEVDVKKATPK 263
+ +++ K +D K A P+
Sbjct: 81 TRHELDSKTIDPKVAFPR 98
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
G+ + T+E LKE+F KYGE++ + DP T RSRGF F+ F D ++K
Sbjct: 26 GLSWQTTQEGLKEYFCKYGEVKECMVMRDPVTKRSRGFGFVTFVDQAGVDK 76
Score = 43.5 bits (101), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 38/57 (66%), Gaps = 2/57 (3%)
Query: 603 VDKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFY 659
V+ E++K++F ++G++++ L D T R RGF F+ F++ + +EK V +++F+
Sbjct: 118 VNTTIEDVKQYFDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEK--VCEIHFH 172
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 452 YDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKP--EPFGVRGGRGG 509
+DK+ ++ + F F+TFE+E VV + + +IN+K V+ KKA PK P G GR
Sbjct: 142 FDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMSPAGSARGRSR 201
Query: 510 RGGRGGRGGRMAGGYGGYGGY 530
G + G GY G+
Sbjct: 202 VMPYGMDAFMLGIGMLGYPGF 222
>gi|410922321|ref|XP_003974631.1| PREDICTED: RNA-binding protein Musashi homolog 1-like isoform 4
[Takifugu rubripes]
Length = 341
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/256 (32%), Positives = 127/256 (49%), Gaps = 30/256 (11%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + T+E LKE+F KYGE++ + DP T RSRGF F+ F D +A V+ V+A+
Sbjct: 26 GLSWQTTQEGLKEYFCKYGEVKECMVMRDPVTKRSRGFGFVTFVD-----QAGVDKVLAQ 80
Query: 166 GNHVINNKKIEAK---------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEM 216
H +++K I+ K K ++ KIFVGGLS E++K +F QFG + + +
Sbjct: 81 TRHELDSKTIDPKVAFPRRAQPKLVTRTKKIFVGGLSVNTTIEDVKQYFDQFGKVDDAML 140
Query: 217 PYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKP--EPFGVRGGRG 274
+DK+ ++ + F F+TFE+E VV + + +IN+K V+ KKA PK P G GR
Sbjct: 141 MFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMSPAGSARGRS 200
Query: 275 GRGGRGGRGGRMAGGYGGYGGYGGG------YGGILYKPLLFYELNELGISGRSLVCRTG 328
G + G GY G+ Y GI P Y+ E + L+
Sbjct: 201 RVMPYGMDAFMLGIGMLGYPGFQTATYTSRTYAGI--TPGYTYQFPEFHLERTPLLTSPH 258
Query: 329 PMVQATPPLAEVDVTG 344
P P L + +T
Sbjct: 259 P-----PELTAIPLTA 269
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 44/78 (56%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+F+GGLS + E +K +F ++G + E + D + + F F+TF ++ V +L
Sbjct: 21 KMFIGGLSWQTTQEGLKEYFCKYGEVKECMVMRDPVTKRSRGFGFVTFVDQAGVDKVLAQ 80
Query: 246 PKQKINDKEVDVKKATPK 263
+ +++ K +D K A P+
Sbjct: 81 TRHELDSKTIDPKVAFPR 98
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
G+ + T+E LKE+F KYGE++ + DP T RSRGF F+ F D ++K
Sbjct: 26 GLSWQTTQEGLKEYFCKYGEVKECMVMRDPVTKRSRGFGFVTFVDQAGVDK 76
Score = 43.5 bits (101), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 38/57 (66%), Gaps = 2/57 (3%)
Query: 603 VDKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFY 659
V+ E++K++F ++G++++ L D T R RGF F+ F++ + +EK V +++F+
Sbjct: 118 VNTTIEDVKQYFDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEK--VCEIHFH 172
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 452 YDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKP--EPFGVRGGRGG 509
+DK+ ++ + F F+TFE+E VV + + +IN+K V+ KKA PK P G GR
Sbjct: 142 FDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMSPAGSARGRSR 201
Query: 510 RGGRGGRGGRMAGGYGGYGGY 530
G + G GY G+
Sbjct: 202 VMPYGMDAFMLGIGMLGYPGF 222
>gi|309266922|ref|XP_003086896.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC237030
[Mus musculus]
gi|309271524|ref|XP_003085337.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC237030
[Mus musculus]
Length = 537
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/181 (37%), Positives = 102/181 (56%), Gaps = 15/181 (8%)
Query: 93 FYIMEAKNKMVSHPGIVHKITEELK-----EHFSKYGEIENVTLKSDPNTGRSRGFAFIV 147
F I KN+ + + +++E+ E+ SK+GEI + +K DPNTG SRGF F++
Sbjct: 21 FKIDATKNQQDASKMFIGGLSQEVNKQVVLEYLSKFGEIIDFIIKIDPNTGLSRGFGFVL 80
Query: 148 FKDTESLEKASVEDVIAEGNHVINNKKIEAKKAKAKSG-----KIFVGGLSPEMKDEEIK 202
FKD+ A+VE V+ H ++ KKIE K+AKA K+FVGGL+P M +E+I+
Sbjct: 81 FKDS-----ATVEKVLRVKEHKVDGKKIEVKRAKALESQFPIKKVFVGGLNPRMSEEKIR 135
Query: 203 AHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATP 262
A+F FG I E+P +R+ F FI ++ E+ V +L+ I +VK A P
Sbjct: 136 AYFGTFGQIEAIELPLCSDTQERRAFGFIKYKDENPVRKVLETRYHFIGSSRCEVKIAYP 195
Query: 263 K 263
K
Sbjct: 196 K 196
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 56/97 (57%)
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
KI+A K + + K+F+GGLS E+ + + + ++FG II+ + D + + F F+ F
Sbjct: 22 KIDATKNQQDASKMFIGGLSQEVNKQVVLEYLSKFGEIIDFIIKIDPNTGLSRGFGFVLF 81
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGVR 270
+ + V +L+ + K++ K+++VK+A F ++
Sbjct: 82 KDSATVEKVLRVKEHKVDGKKIEVKRAKALESQFPIK 118
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 43/69 (62%), Gaps = 5/69 (7%)
Query: 587 FYIVEAKNKMVSHPGIVDKITEELK-----EHFSKYGEIENVTLKSDPNTGRSRGFAFIV 641
F I KN+ + + +++E+ E+ SK+GEI + +K DPNTG SRGF F++
Sbjct: 21 FKIDATKNQQDASKMFIGGLSQEVNKQVVLEYLSKFGEIIDFIIKIDPNTGLSRGFGFVL 80
Query: 642 FKDTESLEK 650
FKD+ ++EK
Sbjct: 81 FKDSATVEK 89
>gi|348508134|ref|XP_003441610.1| PREDICTED: RNA-binding protein Musashi homolog 1-like isoform 3
[Oreochromis niloticus]
Length = 351
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/256 (32%), Positives = 129/256 (50%), Gaps = 30/256 (11%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + T+E LKE+F K+GE++ + DP T RSRGF F+ + E+A VE V+A+
Sbjct: 28 GLSWQTTQEGLKEYFCKFGEVKECMVMRDPVTKRSRGFGFVTYA-----EQAGVEKVLAQ 82
Query: 166 GNHVINNKKIEAK---------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEM 216
H +++K I+ K K ++ KIFVGGLS E++K +F QFG + + +
Sbjct: 83 NRHELDSKTIDPKVAFPRRAQPKLVTRTKKIFVGGLSVNTTIEDVKQYFDQFGKVDDAML 142
Query: 217 PYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKP--EPFGVRGGRG 274
+DK+ ++ + F F+TFE+E VV + + +IN+K V+ KKA PK P G GR
Sbjct: 143 MFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMTPTGSARGRS 202
Query: 275 GRGGRGGRGGRMAGGYGGYGGYGGG------YGGILYKPLLFYELNELGISGRSLVCRTG 328
G + G GY G+ Y GI P Y+ E + L+ +
Sbjct: 203 RVMPYGMDAFMLGIGMLGYPGFQTATYTSRSYSGI--APGYTYQFPEFHLERTPLLTSSH 260
Query: 329 PMVQATPPLAEVDVTG 344
P P LA + +T
Sbjct: 261 P-----PELAAIPLTA 271
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 44/78 (56%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+F+GGLS + E +K +F +FG + E + D + + F F+T+ ++ V +L
Sbjct: 23 KMFIGGLSWQTTQEGLKEYFCKFGEVKECMVMRDPVTKRSRGFGFVTYAEQAGVEKVLAQ 82
Query: 246 PKQKINDKEVDVKKATPK 263
+ +++ K +D K A P+
Sbjct: 83 NRHELDSKTIDPKVAFPR 100
Score = 45.8 bits (107), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVED 655
G+ + T+E LKE+F K+GE++ + DP T RSRGF F+ + + +EK ++
Sbjct: 28 GLSWQTTQEGLKEYFCKFGEVKECMVMRDPVTKRSRGFGFVTYAEQAGVEKVLAQN 83
Score = 43.9 bits (102), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 38/57 (66%), Gaps = 2/57 (3%)
Query: 603 VDKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFY 659
V+ E++K++F ++G++++ L D T R RGF F+ F++ + +EK V +++F+
Sbjct: 120 VNTTIEDVKQYFDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEK--VCEIHFH 174
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 31/46 (67%)
Query: 452 YDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 497
+DK+ ++ + F F+TFE+E VV + + +IN+K V+ KKA PK
Sbjct: 144 FDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPK 189
>gi|410915344|ref|XP_003971147.1| PREDICTED: RNA-binding protein Musashi homolog 2-like isoform 2
[Takifugu rubripes]
Length = 407
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/169 (38%), Positives = 100/169 (59%), Gaps = 16/169 (9%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+ L+++FSK+GEI + DP T RSRGF F+ F D ASV+ V+A+ +H +++K
Sbjct: 35 DSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFTDA-----ASVDKVLAQQHHELDSK 89
Query: 174 KIEAK---------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQ 224
I+ K K ++ KIFVGGLS E++K +F QFG + + + +DK+ ++
Sbjct: 90 TIDPKVAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVDDAMLMFDKTTNR 149
Query: 225 RKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE--PFGVRG 271
+ F FITFE+E +V + + +IN+K V+ KKA PK P G RG
Sbjct: 150 HRGFGFITFENEDIVEKVCEIHFHEINNKMVECKKAQPKEVMFPPGTRG 198
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 59/116 (50%), Gaps = 12/116 (10%)
Query: 75 VSCSHHYYLFDQILRTHFFYIMEAKNKMVSHPGIV-------HKITEELKEHFSKYGEIE 127
V H+ L + + + A+ KMV+ + + + E++K++F ++G+++
Sbjct: 78 VLAQQHHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVD 137
Query: 128 NVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNKKIEAKKAKAK 183
+ L D T R RGF FI F++ + +EK V H INNK +E KKA+ K
Sbjct: 138 DAMLMFDKTTNRHRGFGFITFENEDIVEK-----VCEIHFHEINNKMVECKKAQPK 188
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 45/79 (56%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GK+F+GGLS + + ++ +F++FG I E + D + + + F F+TF + V +L
Sbjct: 21 GKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFTDAASVDKVLA 80
Query: 245 NPKQKINDKEVDVKKATPK 263
+++ K +D K A P+
Sbjct: 81 QQHHELDSKTIDPKVAFPR 99
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 29/43 (67%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+ L+++FSK+GEI + DP T RSRGF F+ F D S++K
Sbjct: 35 DSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFTDAASVDK 77
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 52/98 (53%), Gaps = 9/98 (9%)
Query: 569 VSCSHYHYLFDQNLRTHYFYIVEAKNKMVSHPGIV-------DKITEELKEHFSKYGEIE 621
V +H L + + + A+ KMV+ + + + E++K++F ++G+++
Sbjct: 78 VLAQQHHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVD 137
Query: 622 NVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFY 659
+ L D T R RGF FI F++ + +EK V +++F+
Sbjct: 138 DAMLMFDKTTNRHRGFGFITFENEDIVEK--VCEIHFH 173
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 35/56 (62%), Gaps = 2/56 (3%)
Query: 452 YDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE--PFGVRG 505
+DK+ ++ + F FITFE+E +V + + +IN+K V+ KKA PK P G RG
Sbjct: 143 FDKTTNRHRGFGFITFENEDIVEKVCEIHFHEINNKMVECKKAQPKEVMFPPGTRG 198
>gi|410915342|ref|XP_003971146.1| PREDICTED: RNA-binding protein Musashi homolog 2-like isoform 1
[Takifugu rubripes]
Length = 388
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/169 (38%), Positives = 100/169 (59%), Gaps = 16/169 (9%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+ L+++FSK+GEI + DP T RSRGF F+ F D ASV+ V+A+ +H +++K
Sbjct: 35 DSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFTDA-----ASVDKVLAQQHHELDSK 89
Query: 174 KIEAK---------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQ 224
I+ K K ++ KIFVGGLS E++K +F QFG + + + +DK+ ++
Sbjct: 90 TIDPKVAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVDDAMLMFDKTTNR 149
Query: 225 RKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE--PFGVRG 271
+ F FITFE+E +V + + +IN+K V+ KKA PK P G RG
Sbjct: 150 HRGFGFITFENEDIVEKVCEIHFHEINNKMVECKKAQPKEVMFPPGTRG 198
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 59/116 (50%), Gaps = 12/116 (10%)
Query: 75 VSCSHHYYLFDQILRTHFFYIMEAKNKMVSHPGIV-------HKITEELKEHFSKYGEIE 127
V H+ L + + + A+ KMV+ + + + E++K++F ++G+++
Sbjct: 78 VLAQQHHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVD 137
Query: 128 NVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNKKIEAKKAKAK 183
+ L D T R RGF FI F++ + +EK V H INNK +E KKA+ K
Sbjct: 138 DAMLMFDKTTNRHRGFGFITFENEDIVEK-----VCEIHFHEINNKMVECKKAQPK 188
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 45/79 (56%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GK+F+GGLS + + ++ +F++FG I E + D + + + F F+TF + V +L
Sbjct: 21 GKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFTDAASVDKVLA 80
Query: 245 NPKQKINDKEVDVKKATPK 263
+++ K +D K A P+
Sbjct: 81 QQHHELDSKTIDPKVAFPR 99
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 29/43 (67%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+ L+++FSK+GEI + DP T RSRGF F+ F D S++K
Sbjct: 35 DSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFTDAASVDK 77
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 52/98 (53%), Gaps = 9/98 (9%)
Query: 569 VSCSHYHYLFDQNLRTHYFYIVEAKNKMVSHPGIV-------DKITEELKEHFSKYGEIE 621
V +H L + + + A+ KMV+ + + + E++K++F ++G+++
Sbjct: 78 VLAQQHHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVD 137
Query: 622 NVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFY 659
+ L D T R RGF FI F++ + +EK V +++F+
Sbjct: 138 DAMLMFDKTTNRHRGFGFITFENEDIVEK--VCEIHFH 173
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 35/56 (62%), Gaps = 2/56 (3%)
Query: 452 YDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE--PFGVRG 505
+DK+ ++ + F FITFE+E +V + + +IN+K V+ KKA PK P G RG
Sbjct: 143 FDKTTNRHRGFGFITFENEDIVEKVCEIHFHEINNKMVECKKAQPKEVMFPPGTRG 198
>gi|148688488|gb|EDL20435.1| mCG62132 [Mus musculus]
Length = 518
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/181 (37%), Positives = 102/181 (56%), Gaps = 15/181 (8%)
Query: 93 FYIMEAKNKMVSHPGIVHKITEELK-----EHFSKYGEIENVTLKSDPNTGRSRGFAFIV 147
F I KN+ + + +++E+ E+ SK+GEI + +K DPNTG SRGF F++
Sbjct: 21 FKIDATKNQQDASKMFIGGLSQEVNKQVVLEYLSKFGEIIDFIIKIDPNTGLSRGFGFVL 80
Query: 148 FKDTESLEKASVEDVIAEGNHVINNKKIEAKKAKAKSG-----KIFVGGLSPEMKDEEIK 202
FKD+ A+VE V+ H ++ KKIE K+AKA K+FVGGL+P M +E+I+
Sbjct: 81 FKDS-----ATVEKVLRVKEHKVDGKKIEVKRAKALESQFPIKKVFVGGLNPRMSEEKIR 135
Query: 203 AHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATP 262
A+F FG I E+P +R+ F FI ++ E+ V +L+ I +VK A P
Sbjct: 136 AYFGTFGQIEAIELPLCSDTQERRAFGFIKYKDENPVRKVLETRYHFIGSSRCEVKIAYP 195
Query: 263 K 263
K
Sbjct: 196 K 196
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 56/97 (57%)
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
KI+A K + + K+F+GGLS E+ + + + ++FG II+ + D + + F F+ F
Sbjct: 22 KIDATKNQQDASKMFIGGLSQEVNKQVVLEYLSKFGEIIDFIIKIDPNTGLSRGFGFVLF 81
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGVR 270
+ + V +L+ + K++ K+++VK+A F ++
Sbjct: 82 KDSATVEKVLRVKEHKVDGKKIEVKRAKALESQFPIK 118
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 43/69 (62%), Gaps = 5/69 (7%)
Query: 587 FYIVEAKNKMVSHPGIVDKITEELK-----EHFSKYGEIENVTLKSDPNTGRSRGFAFIV 641
F I KN+ + + +++E+ E+ SK+GEI + +K DPNTG SRGF F++
Sbjct: 21 FKIDATKNQQDASKMFIGGLSQEVNKQVVLEYLSKFGEIIDFIIKIDPNTGLSRGFGFVL 80
Query: 642 FKDTESLEK 650
FKD+ ++EK
Sbjct: 81 FKDSATVEK 89
>gi|410915346|ref|XP_003971148.1| PREDICTED: RNA-binding protein Musashi homolog 2-like isoform 3
[Takifugu rubripes]
Length = 328
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/169 (38%), Positives = 100/169 (59%), Gaps = 16/169 (9%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+ L+++FSK+GEI + DP T RSRGF F+ F D ASV+ V+A+ +H +++K
Sbjct: 35 DSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFTDA-----ASVDKVLAQQHHELDSK 89
Query: 174 KIEAK---------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQ 224
I+ K K ++ KIFVGGLS E++K +F QFG + + + +DK+ ++
Sbjct: 90 TIDPKVAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVDDAMLMFDKTTNR 149
Query: 225 RKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE--PFGVRG 271
+ F FITFE+E +V + + +IN+K V+ KKA PK P G RG
Sbjct: 150 HRGFGFITFENEDIVEKVCEIHFHEINNKMVECKKAQPKEVMFPPGTRG 198
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 59/116 (50%), Gaps = 12/116 (10%)
Query: 75 VSCSHHYYLFDQILRTHFFYIMEAKNKMVSHPGIV-------HKITEELKEHFSKYGEIE 127
V H+ L + + + A+ KMV+ + + + E++K++F ++G+++
Sbjct: 78 VLAQQHHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVD 137
Query: 128 NVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNKKIEAKKAKAK 183
+ L D T R RGF FI F++ + +EK V H INNK +E KKA+ K
Sbjct: 138 DAMLMFDKTTNRHRGFGFITFENEDIVEK-----VCEIHFHEINNKMVECKKAQPK 188
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 45/79 (56%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GK+F+GGLS + + ++ +F++FG I E + D + + + F F+TF + V +L
Sbjct: 21 GKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFTDAASVDKVLA 80
Query: 245 NPKQKINDKEVDVKKATPK 263
+++ K +D K A P+
Sbjct: 81 QQHHELDSKTIDPKVAFPR 99
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 29/43 (67%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+ L+++FSK+GEI + DP T RSRGF F+ F D S++K
Sbjct: 35 DSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFTDAASVDK 77
Score = 45.4 bits (106), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 52/98 (53%), Gaps = 9/98 (9%)
Query: 569 VSCSHYHYLFDQNLRTHYFYIVEAKNKMVSHPGIV-------DKITEELKEHFSKYGEIE 621
V +H L + + + A+ KMV+ + + + E++K++F ++G+++
Sbjct: 78 VLAQQHHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVD 137
Query: 622 NVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFY 659
+ L D T R RGF FI F++ + +EK V +++F+
Sbjct: 138 DAMLMFDKTTNRHRGFGFITFENEDIVEK--VCEIHFH 173
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 35/56 (62%), Gaps = 2/56 (3%)
Query: 452 YDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE--PFGVRG 505
+DK+ ++ + F FITFE+E +V + + +IN+K V+ KKA PK P G RG
Sbjct: 143 FDKTTNRHRGFGFITFENEDIVEKVCEIHFHEINNKMVECKKAQPKEVMFPPGTRG 198
>gi|380492932|emb|CCF34246.1| nuclear polyadenylated RNA-binding protein [Colletotrichum
higginsianum]
Length = 448
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/190 (35%), Positives = 109/190 (57%), Gaps = 13/190 (6%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+ L+++FS++GE+ T+ D +TGRSRGF F+ F+D +++ V++ +G +I+ K
Sbjct: 13 QSLRDYFSQFGEVVECTVMRDSSTGRSRGFGFLTFRDPKTVNIVMVKEHFLDGK-IIDPK 71
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
+ + + K+ KIFVGG+S E D+E K +FAQFG +++ + DK + + F F+TF
Sbjct: 72 RAIPRDEQEKTSKIFVGGVSQETTDQEFKDYFAQFGRVVDATLMMDKDTGRPRGFGFVTF 131
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKATPK-----PEPFGVRGGRGGRG------GRGGR 282
E E+ V L +I+ K ++VKKA P+ E RGG+ +G G+ G
Sbjct: 132 ESEAGVEACLST-SLEIHGKPIEVKKAQPRGNLREEEEAARRGGKFRKGDDNAQSGQSGM 190
Query: 283 GGRMAGGYGG 292
GG G GG
Sbjct: 191 GGNQMGATGG 200
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
Query: 187 IFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNP 246
+F+GGL+ E D+ ++ +F+QFG ++E + D S + + F F+TF + ++++
Sbjct: 1 MFIGGLNWETTDQSLRDYFSQFGEVVECTVMRDSSTGRSRGFGFLTF-RDPKTVNIVMVK 59
Query: 247 KQKINDKEVDVKKATPKPE 265
+ ++ K +D K+A P+ E
Sbjct: 60 EHFLDGKIIDPKRAIPRDE 78
Score = 47.0 bits (110), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 35/51 (68%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYF 658
+ L+++FS++GE+ T+ D +TGRSRGF F+ F+D +++ V++ +
Sbjct: 13 QSLRDYFSQFGEVVECTVMRDSSTGRSRGFGFLTFRDPKTVNIVMVKEHFL 63
Score = 43.1 bits (100), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 601 GIVDKIT-EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLE 649
G+ + T +E K++F+++G + + TL D +TGR RGF F+ F+ +E
Sbjct: 89 GVSQETTDQEFKDYFAQFGRVVDATLMMDKDTGRPRGFGFVTFESEAGVE 138
>gi|410922317|ref|XP_003974629.1| PREDICTED: RNA-binding protein Musashi homolog 1-like isoform 2
[Takifugu rubripes]
Length = 329
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/179 (37%), Positives = 104/179 (58%), Gaps = 17/179 (9%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + T+E LKE+F KYGE++ + DP T RSRGF F+ F D +A V+ V+A+
Sbjct: 26 GLSWQTTQEGLKEYFCKYGEVKECMVMRDPVTKRSRGFGFVTFVD-----QAGVDKVLAQ 80
Query: 166 GNHVINNKKIEAK---------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEM 216
H +++K I+ K K ++ KIFVGGLS E++K +F QFG + + +
Sbjct: 81 TRHELDSKTIDPKVAFPRRAQPKLVTRTKKIFVGGLSVNTTIEDVKQYFDQFGKVDDAML 140
Query: 217 PYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKP--EPFGVRGGR 273
+DK+ ++ + F F+TFE+E VV + + +IN+K V+ KKA PK P G GR
Sbjct: 141 MFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMSPAGSARGR 199
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 44/78 (56%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+F+GGLS + E +K +F ++G + E + D + + F F+TF ++ V +L
Sbjct: 21 KMFIGGLSWQTTQEGLKEYFCKYGEVKECMVMRDPVTKRSRGFGFVTFVDQAGVDKVLAQ 80
Query: 246 PKQKINDKEVDVKKATPK 263
+ +++ K +D K A P+
Sbjct: 81 TRHELDSKTIDPKVAFPR 98
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 28/43 (65%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
E LKE+F KYGE++ + DP T RSRGF F+ F D ++K
Sbjct: 34 EGLKEYFCKYGEVKECMVMRDPVTKRSRGFGFVTFVDQAGVDK 76
Score = 43.9 bits (102), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 38/57 (66%), Gaps = 2/57 (3%)
Query: 603 VDKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFY 659
V+ E++K++F ++G++++ L D T R RGF F+ F++ + +EK V +++F+
Sbjct: 118 VNTTIEDVKQYFDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEK--VCEIHFH 172
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
Query: 452 YDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKP--EPFGVRGGR 507
+DK+ ++ + F F+TFE+E VV + + +IN+K V+ KKA PK P G GR
Sbjct: 142 FDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMSPAGSARGR 199
>gi|348516192|ref|XP_003445623.1| PREDICTED: RNA-binding protein Musashi homolog 1-like [Oreochromis
niloticus]
Length = 329
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/179 (37%), Positives = 104/179 (58%), Gaps = 17/179 (9%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + T+E LKE+F KYGE++ + DP T RSRGF F+ F D +A V+ V+A+
Sbjct: 26 GLSWQTTQEGLKEYFCKYGEVKECMVMRDPVTKRSRGFGFVTFVD-----QAGVDKVLAQ 80
Query: 166 GNHVINNKKIEAK---------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEM 216
H +++K I+ K K ++ KIFVGGLS E++K +F QFG + + +
Sbjct: 81 TRHELDSKTIDPKVAFPRRAQPKLVTRTKKIFVGGLSVNTTIEDVKQYFDQFGKVDDAML 140
Query: 217 PYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKP--EPFGVRGGR 273
+DK+ ++ + F F+TFE+E VV + + +IN+K V+ KKA PK P G GR
Sbjct: 141 MFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMSPTGSARGR 199
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 44/78 (56%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+F+GGLS + E +K +F ++G + E + D + + F F+TF ++ V +L
Sbjct: 21 KMFIGGLSWQTTQEGLKEYFCKYGEVKECMVMRDPVTKRSRGFGFVTFVDQAGVDKVLAQ 80
Query: 246 PKQKINDKEVDVKKATPK 263
+ +++ K +D K A P+
Sbjct: 81 TRHELDSKTIDPKVAFPR 98
Score = 48.5 bits (114), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 28/43 (65%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
E LKE+F KYGE++ + DP T RSRGF F+ F D ++K
Sbjct: 34 EGLKEYFCKYGEVKECMVMRDPVTKRSRGFGFVTFVDQAGVDK 76
Score = 43.5 bits (101), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 38/57 (66%), Gaps = 2/57 (3%)
Query: 603 VDKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFY 659
V+ E++K++F ++G++++ L D T R RGF F+ F++ + +EK V +++F+
Sbjct: 118 VNTTIEDVKQYFDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEK--VCEIHFH 172
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
Query: 452 YDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKP--EPFGVRGGR 507
+DK+ ++ + F F+TFE+E VV + + +IN+K V+ KKA PK P G GR
Sbjct: 142 FDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMSPTGSARGR 199
>gi|255576302|ref|XP_002529044.1| Heterogeneous nuclear ribonucleoprotein 27C, putative [Ricinus
communis]
gi|223531524|gb|EEF33355.1| Heterogeneous nuclear ribonucleoprotein 27C, putative [Ricinus
communis]
Length = 478
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 62/171 (36%), Positives = 91/171 (53%), Gaps = 27/171 (15%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
E LKE+FSKYGE+ + D TGR+RGF F+VF D E+ V+ H+I+ +
Sbjct: 20 ERLKEYFSKYGEVVEAVIMRDRTTGRARGFGFVVFADPAVAERVIVDK------HMIDGR 73
Query: 174 KIEAKKA---------------------KAKSGKIFVGGLSPEMKDEEIKAHFAQFGNII 212
+EAKKA ++ KIFVGGL+ + D + K +F QFGNI
Sbjct: 74 TVEAKKAVPRDDQHILNRNTSSIHGSPGPGRTKKIFVGGLASTVTDNDFKKYFEQFGNIT 133
Query: 213 ETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ + YD + + + F FIT++ E V +L ++N K V+VK+A PK
Sbjct: 134 DVVVMYDHNTQRPRGFGFITYDSEDAVDRVLHKTFHELNGKMVEVKRAVPK 184
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GK+F+GG+S + +E +K +F+++G ++E + D++ + + F F+ F +V ++
Sbjct: 6 GKLFIGGISWDTDEERLKEYFSKYGEVVEAVIMRDRTTGRARGFGFVVFADPAVAERVIV 65
Query: 245 NPKQKINDKEVDVKKATPK 263
+ K I+ + V+ KKA P+
Sbjct: 66 D-KHMIDGRTVEAKKAVPR 83
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 31/51 (60%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVE 654
D E LKE+FSKYGE+ + D TGR+RGF F+VF D E+ V+
Sbjct: 16 DTDEERLKEYFSKYGEVVEAVIMRDRTTGRARGFGFVVFADPAVAERVIVD 66
>gi|344285367|ref|XP_003414433.1| PREDICTED: RNA-binding protein Musashi homolog 2-like [Loxodonta
africana]
Length = 520
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/195 (34%), Positives = 106/195 (54%), Gaps = 17/195 (8%)
Query: 88 LRTHFFYIMEAKNKMVSHPGIVHKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIV 147
R H ++ + PG + L+++FSK+GEI + DP T RSRGF F+
Sbjct: 55 FRRHLLPNPTSRLALARCPGFPFSF-DSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVT 113
Query: 148 FKDTESLEKASVEDVIAEGNHVINNKKIEAK---------KAKAKSGKIFVGGLSPEMKD 198
F D ASV+ V+ + +H +++K I+ K K ++ KIFVGGLS
Sbjct: 114 FAD-----PASVDKVLGQPHHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSANTVV 168
Query: 199 EEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVK 258
E++K +F QFG + + + +DK+ ++ + F F+TFE+E VV + + +IN+K V+ K
Sbjct: 169 EDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECK 228
Query: 259 KATPKPE--PFGVRG 271
KA PK P G RG
Sbjct: 229 KAQPKEVMFPPGTRG 243
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 68/133 (51%), Gaps = 19/133 (14%)
Query: 58 SFSENCLLEDSIGKPLTVSCSHHYYLFDQILRTHFFYIMEAKNKMVSHPGIV-------H 110
+F++ ++ +G+P H+ L + + + A+ KMV+ + +
Sbjct: 113 TFADPASVDKVLGQP-------HHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSAN 165
Query: 111 KITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVI 170
+ E++K++F ++G++E+ L D T R RGF F+ F++ + +EK V H I
Sbjct: 166 TVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEK-----VCEIHFHEI 220
Query: 171 NNKKIEAKKAKAK 183
NNK +E KKA+ K
Sbjct: 221 NNKMVECKKAQPK 233
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 582 LRTHYFYIVEAKNKMVSHPGIVDKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIV 641
R H ++ + PG + L+++FSK+GEI + DP T RSRGF F+
Sbjct: 55 FRRHLLPNPTSRLALARCPGFPFSF-DSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVT 113
Query: 642 FKDTESLEK 650
F D S++K
Sbjct: 114 FADPASVDK 122
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 61/115 (53%), Gaps = 16/115 (13%)
Query: 552 SFSENCLLEDSIGKPLTVSCSHYHYLFDQNLRTHYFYIVEAKNKMVSHPGIV-------D 604
+F++ ++ +G+P +H L + + + A+ KMV+ + +
Sbjct: 113 TFADPASVDKVLGQP-------HHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSAN 165
Query: 605 KITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFY 659
+ E++K++F ++G++E+ L D T R RGF F+ F++ + +EK V +++F+
Sbjct: 166 TVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEK--VCEIHFH 218
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 35/56 (62%), Gaps = 2/56 (3%)
Query: 452 YDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE--PFGVRG 505
+DK+ ++ + F F+TFE+E VV + + +IN+K V+ KKA PK P G RG
Sbjct: 188 FDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMFPPGTRG 243
>gi|196004432|ref|XP_002112083.1| hypothetical protein TRIADDRAFT_63876 [Trichoplax adhaerens]
gi|190585982|gb|EDV26050.1| hypothetical protein TRIADDRAFT_63876 [Trichoplax adhaerens]
Length = 331
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 102/169 (60%), Gaps = 17/169 (10%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + TEE L+++FSK+G I + T+K+DP T RSRGFAF+ F + A V+ V+
Sbjct: 79 GLNWETTEEGLQKYFSKFGTIVSSTIKNDPITHRSRGFAFVTFAN-----PADVDKVLES 133
Query: 166 GNHVINNKKIEAKKA-----------KAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIET 214
G H ++N+ ++ K+A + ++ KIF+GGL E + +K F++FGNI++
Sbjct: 134 GPHQLDNRTVDPKRALPLHKQIQLKGQHRTKKIFIGGLGAEHTESSLKEFFSEFGNILDV 193
Query: 215 EMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
E DK +R+ FCF++F+ E V + ++ ++V++K+ATPK
Sbjct: 194 EFVTDKLTRKRRGFCFLSFDTEEAVDKACEKQFHVVSGRQVEIKRATPK 242
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 49/77 (63%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+F+GGL+ E +E ++ +F++FG I+ + + D + + F F+TF + + V +L++
Sbjct: 74 KMFIGGLNWETTEEGLQKYFSKFGTIVSSTIKNDPITHRSRGFAFVTFANPADVDKVLES 133
Query: 246 PKQKINDKEVDVKKATP 262
+++++ VD K+A P
Sbjct: 134 GPHQLDNRTVDPKRALP 150
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
G+ + TEE L+++FSK+G I + T+K+DP T RSRGFAF+ F + ++K
Sbjct: 79 GLNWETTEEGLQKYFSKFGTIVSSTIKNDPITHRSRGFAFVTFANPADVDK 129
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 32/53 (60%)
Query: 445 IIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 497
I++ E DK +R+ FCF++F+ E V + ++ ++V++K+ATPK
Sbjct: 190 ILDVEFVTDKLTRKRRGFCFLSFDTEEAVDKACEKQFHVVSGRQVEIKRATPK 242
>gi|148683902|gb|EDL15849.1| Musashi homolog 2 (Drosophila), isoform CRA_d [Mus musculus]
Length = 250
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 65/170 (38%), Positives = 100/170 (58%), Gaps = 16/170 (9%)
Query: 113 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINN 172
T+ L+++FSK+GEI + DP T RSRGF F+ F D ASV+ V+ + +H +++
Sbjct: 2 TDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADP-----ASVDKVLGQPHHELDS 56
Query: 173 KKIEAK---------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKS 223
K I+ K K ++ KIFVGGLS E++K +F QFG + + + +DK+ +
Sbjct: 57 KTIDPKVAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTN 116
Query: 224 QRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE--PFGVRG 271
+ + F F+TFE+E VV + + +IN+K V+ KKA PK P G RG
Sbjct: 117 RHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMFPPGTRG 166
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 68/133 (51%), Gaps = 19/133 (14%)
Query: 58 SFSENCLLEDSIGKPLTVSCSHHYYLFDQILRTHFFYIMEAKNKMVSHPGIV-------H 110
+F++ ++ +G+P H+ L + + + A+ KMV+ + +
Sbjct: 36 TFADPASVDKVLGQP-------HHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSAN 88
Query: 111 KITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVI 170
+ E++K++F ++G++E+ L D T R RGF F+ F++ + +EK V H I
Sbjct: 89 TVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEK-----VCEIHFHEI 143
Query: 171 NNKKIEAKKAKAK 183
NNK +E KKA+ K
Sbjct: 144 NNKMVECKKAQPK 156
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 30/45 (66%)
Query: 607 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
T+ L+++FSK+GEI + DP T RSRGF F+ F D S++K
Sbjct: 2 TDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKV 46
Score = 47.0 bits (110), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 61/115 (53%), Gaps = 16/115 (13%)
Query: 552 SFSENCLLEDSIGKPLTVSCSHYHYLFDQNLRTHYFYIVEAKNKMVSHPGIV-------D 604
+F++ ++ +G+P +H L + + + A+ KMV+ + +
Sbjct: 36 TFADPASVDKVLGQP-------HHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSAN 88
Query: 605 KITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFY 659
+ E++K++F ++G++E+ L D T R RGF F+ F++ + +EK V +++F+
Sbjct: 89 TVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEK--VCEIHFH 141
Score = 40.8 bits (94), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 35/56 (62%), Gaps = 2/56 (3%)
Query: 452 YDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE--PFGVRG 505
+DK+ ++ + F F+TFE+E VV + + +IN+K V+ KKA PK P G RG
Sbjct: 111 FDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMFPPGTRG 166
>gi|313220630|emb|CBY31476.1| unnamed protein product [Oikopleura dioica]
Length = 321
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/151 (40%), Positives = 98/151 (64%), Gaps = 5/151 (3%)
Query: 113 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINN 172
TE LK +F+ +G++++V +K DPNT +SRGF F++F + + SVE V+A+ +H ++
Sbjct: 60 TESLKAYFANFGDVQDVVVKVDPNTQQSRGFGFVLF-----INEDSVEAVVAQQHHELDG 114
Query: 173 KKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFIT 232
KKI+ KKA+ + GK+FVGG+ P D+EIKA+F QFG + E P +K ++ K FCF+
Sbjct: 115 KKIDPKKAQRRDGKMFVGGVLPATSDDEIKAYFEQFGEVEEIIRPVNKESNENKPFCFVL 174
Query: 233 FEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
F+ + ++ K +IN K + K + PK
Sbjct: 175 FKRDGILSKCTKQRFHEINGKRCECKASFPK 205
Score = 45.4 bits (106), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 45/77 (58%)
Query: 184 SGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLL 243
+ K+FVGGLS E +KA+FA FG++ + + D + Q + F F+ F +E V ++
Sbjct: 46 NAKMFVGGLSKNTTTESLKAYFANFGDVQDVVVKVDPNTQQSRGFGFVLFINEDSVEAVV 105
Query: 244 KNPKQKINDKEVDVKKA 260
+++ K++D KKA
Sbjct: 106 AQQHHELDGKKIDPKKA 122
Score = 39.3 bits (90), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 34/43 (79%)
Query: 607 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLE 649
TE LK +F+ +G++++V +K DPNT +SRGF F++F + +S+E
Sbjct: 60 TESLKAYFANFGDVQDVVVKVDPNTQQSRGFGFVLFINEDSVE 102
>gi|41056104|ref|NP_957403.1| musashi homolog 2 [Danio rerio]
gi|32822918|gb|AAH55251.1| Musashi homolog 2b (Drosophila) [Danio rerio]
Length = 408
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 65/169 (38%), Positives = 100/169 (59%), Gaps = 16/169 (9%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+ L+++FSK+GEI + DP T RSRGF F+ F D ASV+ V+A+ +H +++K
Sbjct: 35 DSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADA-----ASVDKVLAQPHHELDSK 89
Query: 174 KIEAK---------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQ 224
I+ K K ++ KIFVGGLS E++K +F QFG + + + +DK+ ++
Sbjct: 90 TIDPKVAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNR 149
Query: 225 RKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE--PFGVRG 271
+ F F+TFE+E VV + + +IN+K V+ KKA PK P G RG
Sbjct: 150 HRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMFPPGTRG 198
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 67/133 (50%), Gaps = 19/133 (14%)
Query: 58 SFSENCLLEDSIGKPLTVSCSHHYYLFDQILRTHFFYIMEAKNKMVSHPGIV-------H 110
+F++ ++ + +P H+ L + + + A+ KMV+ + +
Sbjct: 68 TFADAASVDKVLAQP-------HHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSAN 120
Query: 111 KITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVI 170
+ E++K++F ++G++E+ L D T R RGF F+ F++ + +EK V H I
Sbjct: 121 TVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEK-----VCEIHFHEI 175
Query: 171 NNKKIEAKKAKAK 183
NNK +E KKA+ K
Sbjct: 176 NNKMVECKKAQPK 188
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 46/79 (58%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GK+F+GGLS + + ++ +F++FG I E + D + + + F F+TF + V +L
Sbjct: 21 GKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADAASVDKVLA 80
Query: 245 NPKQKINDKEVDVKKATPK 263
P +++ K +D K A P+
Sbjct: 81 QPHHELDSKTIDPKVAFPR 99
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 29/43 (67%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+ L+++FSK+GEI + DP T RSRGF F+ F D S++K
Sbjct: 35 DSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADAASVDK 77
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/115 (22%), Positives = 60/115 (52%), Gaps = 16/115 (13%)
Query: 552 SFSENCLLEDSIGKPLTVSCSHYHYLFDQNLRTHYFYIVEAKNKMVSHPGIV-------D 604
+F++ ++ + +P +H L + + + A+ KMV+ + +
Sbjct: 68 TFADAASVDKVLAQP-------HHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSAN 120
Query: 605 KITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFY 659
+ E++K++F ++G++E+ L D T R RGF F+ F++ + +EK V +++F+
Sbjct: 121 TVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEK--VCEIHFH 173
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 35/56 (62%), Gaps = 2/56 (3%)
Query: 452 YDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE--PFGVRG 505
+DK+ ++ + F F+TFE+E VV + + +IN+K V+ KKA PK P G RG
Sbjct: 143 FDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMFPPGTRG 198
>gi|198453793|ref|XP_002137742.1| GA27393 [Drosophila pseudoobscura pseudoobscura]
gi|198132515|gb|EDY68300.1| GA27393 [Drosophila pseudoobscura pseudoobscura]
Length = 643
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 74/208 (35%), Positives = 109/208 (52%), Gaps = 15/208 (7%)
Query: 113 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINN 172
+++LKE+F+ +G + +V + DP T RSRGF FI F+D +VE V+ H ++
Sbjct: 223 SDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQD-----PCTVEKVLKVPIHTLDG 277
Query: 173 KKIEAKKAKAK--------SGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQ 224
KKI+ K A K + KIFVGG+S + EE+KA+FAQFG + ET M D+ +
Sbjct: 278 KKIDPKHATPKNRPRQANKTKKIFVGGVSQDTSAEEVKAYFAQFGPVEETVMLMDQQTKR 337
Query: 225 RKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGVRGGRGGRGGRGGRGG 284
+ F F+TFE+E VV + + I +K+V+ KKA PK R G G
Sbjct: 338 HRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPKESVTPAAQLLQKRIMLGSLGV 397
Query: 285 RMAGGYGGYGGYGGGYGGILYKPLLFYE 312
++ G G G GG+ PL +
Sbjct: 398 QLPSAPGQLIGARG--GGLAMNPLAMLQ 423
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 47/82 (57%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GK+FVGGLS + +++K +F FG + + + D + + F FITF+ V +LK
Sbjct: 210 GKLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQDPCTVEKVLK 269
Query: 245 NPKQKINDKEVDVKKATPKPEP 266
P ++ K++D K ATPK P
Sbjct: 270 VPIHTLDGKKIDPKHATPKNRP 291
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 32/44 (72%)
Query: 607 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+++LKE+F+ +G + +V + DP T RSRGF FI F+D ++EK
Sbjct: 223 SDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQDPCTVEK 266
Score = 42.4 bits (98), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFYS 660
D EE+K +F+++G +E + D T R RGF F+ F++ + +++ V +++F++
Sbjct: 308 DTSAEEVKAYFAQFGPVEETVMLMDQQTKRHRGFGFVTFENEDVVDR--VCEIHFHT 362
>gi|213513574|ref|NP_001133787.1| RNA-binding protein Musashi homolog 2 [Salmo salar]
gi|209155330|gb|ACI33897.1| RNA-binding protein Musashi homolog 2 [Salmo salar]
Length = 366
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 66/169 (39%), Positives = 99/169 (58%), Gaps = 16/169 (9%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+ L+++FSK+GEI + DP T RSRGF F+ F D ASV+ V+A+ +H +++K
Sbjct: 35 DSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADA-----ASVDKVLAQPHHELDSK 89
Query: 174 KIEAK---------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQ 224
I+ K K ++ KIFVGGLS E++K +F QFG + + + +DK+ ++
Sbjct: 90 TIDPKVAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNR 149
Query: 225 RKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE--PFGVRG 271
+ F FITFE E VV + + +IN+K V+ KKA PK P G RG
Sbjct: 150 HRGFGFITFEGEDVVEKVCEIHFHEINNKMVECKKAQPKEVMFPPGTRG 198
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 46/79 (58%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GK+F+GGLS + + ++ +F++FG I E + D + + + F F+TF + V +L
Sbjct: 21 GKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADAASVDKVLA 80
Query: 245 NPKQKINDKEVDVKKATPK 263
P +++ K +D K A P+
Sbjct: 81 QPHHELDSKTIDPKVAFPR 99
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 66/133 (49%), Gaps = 19/133 (14%)
Query: 58 SFSENCLLEDSIGKPLTVSCSHHYYLFDQILRTHFFYIMEAKNKMVSHPGIV-------H 110
+F++ ++ + +P H+ L + + + A+ KMV+ + +
Sbjct: 68 TFADAASVDKVLAQP-------HHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSAN 120
Query: 111 KITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVI 170
+ E++K++F ++G++E+ L D T R RGF FI F+ + +EK V H I
Sbjct: 121 TVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFITFEGEDVVEK-----VCEIHFHEI 175
Query: 171 NNKKIEAKKAKAK 183
NNK +E KKA+ K
Sbjct: 176 NNKMVECKKAQPK 188
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 29/43 (67%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+ L+++FSK+GEI + DP T RSRGF F+ F D S++K
Sbjct: 35 DSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADAASVDK 77
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 59/115 (51%), Gaps = 16/115 (13%)
Query: 552 SFSENCLLEDSIGKPLTVSCSHYHYLFDQNLRTHYFYIVEAKNKMVSHPGIV-------D 604
+F++ ++ + +P +H L + + + A+ KMV+ + +
Sbjct: 68 TFADAASVDKVLAQP-------HHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSAN 120
Query: 605 KITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFY 659
+ E++K++F ++G++E+ L D T R RGF FI F+ + +EK V +++F+
Sbjct: 121 TVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFITFEGEDVVEK--VCEIHFH 173
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 34/56 (60%), Gaps = 2/56 (3%)
Query: 452 YDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE--PFGVRG 505
+DK+ ++ + F FITFE E VV + + +IN+K V+ KKA PK P G RG
Sbjct: 143 FDKTTNRHRGFGFITFEGEDVVEKVCEIHFHEINNKMVECKKAQPKEVMFPPGTRG 198
>gi|432104101|gb|ELK30931.1| Heterogeneous nuclear ribonucleoprotein A/B [Myotis davidii]
Length = 308
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 58/127 (45%), Positives = 86/127 (67%), Gaps = 9/127 (7%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++LK++F+K+GE+ + T+K DPNTGRSRGF FI+FKD ASVE V+ + H ++ +
Sbjct: 13 KDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDA-----ASVEKVLDQKEHKLDGR 67
Query: 174 KIEAKKAKAKS----GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFC 229
I+ KKA A KIFVGGL+PE +E+I+ +F +FG I ++P D ++R+ F
Sbjct: 68 VIDPKKAMAMKKEPVKKIFVGGLNPEATEEKIREYFGEFGEIEAIDLPMDPKSNKRRGFV 127
Query: 230 FITFEHE 236
FITF+ E
Sbjct: 128 FITFKEE 134
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 38/48 (79%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
D ++LK++F+K+GE+ + T+K DPNTGRSRGF FI+FKD S+EK
Sbjct: 9 DTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKV 56
Score = 45.8 bits (107), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 32/50 (64%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVY 657
E+++E+F ++GEIE + L DP + + RGF FI FK+ E K +E +
Sbjct: 97 EKIREYFGEFGEIEAIDLPMDPKSNKRRGFVFITFKEEEEPVKKVLEKKF 146
Score = 43.5 bits (101), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 46/81 (56%), Gaps = 1/81 (1%)
Query: 187 IFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNP 246
+FVG LS + +++K +F +FG +++ + D + + + F FI F+ + V +L
Sbjct: 1 MFVGHLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQK 60
Query: 247 KQKINDKEVDVKKATP-KPEP 266
+ K++ + +D KKA K EP
Sbjct: 61 EHKLDGRVIDPKKAMAMKKEP 81
>gi|395531900|ref|XP_003768011.1| PREDICTED: RNA-binding protein Musashi homolog 2 [Sarcophilus
harrisii]
Length = 345
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 65/169 (38%), Positives = 100/169 (59%), Gaps = 16/169 (9%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+ L+++FSK+GEI + DP T RSRGF F+ F D ASV+ V+A+ +H +++K
Sbjct: 34 DSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFAD-----PASVDKVLAQPHHELDSK 88
Query: 174 KIEAK---------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQ 224
I+ K K ++ KIFVGGLS E++K +F QFG + + + +DK+ ++
Sbjct: 89 TIDPKVAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNR 148
Query: 225 RKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE--PFGVRG 271
+ F F+TFE+E VV + + +IN+K V+ KKA PK P G RG
Sbjct: 149 HRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMFPPGTRG 197
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 58/111 (52%), Gaps = 12/111 (10%)
Query: 80 HYYLFDQILRTHFFYIMEAKNKMVSHPGIV-------HKITEELKEHFSKYGEIENVTLK 132
H+ L + + + A+ KMV+ + + + E++K++F ++G++E+ L
Sbjct: 82 HHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLM 141
Query: 133 SDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNKKIEAKKAKAK 183
D T R RGF F+ F++ + +EK V H INNK +E KKA+ K
Sbjct: 142 FDKTTNRHRGFGFVTFENEDVVEK-----VCEIHFHEINNKMVECKKAQPK 187
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 46/79 (58%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GK+F+GGLS + + ++ +F++FG I E + D + + + F F+TF + V +L
Sbjct: 20 GKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLA 79
Query: 245 NPKQKINDKEVDVKKATPK 263
P +++ K +D K A P+
Sbjct: 80 QPHHELDSKTIDPKVAFPR 98
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 29/43 (67%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+ L+++FSK+GEI + DP T RSRGF F+ F D S++K
Sbjct: 34 DSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDK 76
Score = 45.4 bits (106), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Query: 574 YHYLFDQNLRTHYFYIVEAKNKMVSHPGIV-------DKITEELKEHFSKYGEIENVTLK 626
+H L + + + A+ KMV+ + + + E++K++F ++G++E+ L
Sbjct: 82 HHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLM 141
Query: 627 SDPNTGRSRGFAFIVFKDTESLEKASVEDVYFY 659
D T R RGF F+ F++ + +EK V +++F+
Sbjct: 142 FDKTTNRHRGFGFVTFENEDVVEK--VCEIHFH 172
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 35/56 (62%), Gaps = 2/56 (3%)
Query: 452 YDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE--PFGVRG 505
+DK+ ++ + F F+TFE+E VV + + +IN+K V+ KKA PK P G RG
Sbjct: 142 FDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMFPPGTRG 197
>gi|348535473|ref|XP_003455225.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B-like
[Oreochromis niloticus]
Length = 332
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 61/153 (39%), Positives = 93/153 (60%), Gaps = 9/153 (5%)
Query: 115 ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNKK 174
+LK++FSK+GE+ + T+K D TGRSRGF FI+FKD ASVE V+ + H ++ ++
Sbjct: 89 DLKDYFSKFGEVTDCTIKMDQQTGRSRGFGFILFKDA-----ASVEKVLEQKEHRLDGRQ 143
Query: 175 IEAKKAKAKSG----KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCF 230
I+ KKA A KIFVGGL+P+ E I+ +F FG I E+P D +R+ F F
Sbjct: 144 IDPKKAMAMKKDPVKKIFVGGLNPDTSKEVIEEYFGTFGEIETIELPQDPKTEKRRGFVF 203
Query: 231 ITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
IT++ E+ V +++ + + ++K A PK
Sbjct: 204 ITYKEEAPVKKVMEKKYHNVGGSKCEIKIAQPK 236
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 36/47 (76%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D ++LK++FSK+GE+ + T+K D TGRSRGF FI+FKD S+EK
Sbjct: 84 DTSKKDLKDYFSKFGEVTDCTIKMDQQTGRSRGFGFILFKDAASVEK 130
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 55/87 (63%)
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
+I+A K + +GK+FVGGLS + +++K +F++FG + + + D+ + + F FI F
Sbjct: 63 QIDASKGEEDAGKMFVGGLSWDTSKKDLKDYFSKFGEVTDCTIKMDQQTGRSRGFGFILF 122
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKA 260
+ + V +L+ + +++ +++D KKA
Sbjct: 123 KDAASVEKVLEQKEHRLDGRQIDPKKA 149
Score = 42.7 bits (99), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 29/47 (61%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D E ++E+F +GEIE + L DP T + RGF FI +K+ ++K
Sbjct: 168 DTSKEVIEEYFGTFGEIETIELPQDPKTEKRRGFVFITYKEEAPVKK 214
>gi|449479907|ref|XP_002196910.2| PREDICTED: RNA-binding protein Musashi homolog 2 isoform 1
[Taeniopygia guttata]
Length = 306
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 65/169 (38%), Positives = 100/169 (59%), Gaps = 16/169 (9%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+ L+++FSK+GEI + DP T RSRGF F+ F D ASV+ V+A+ +H +++K
Sbjct: 13 DSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFAD-----PASVDKVLAQPHHELDSK 67
Query: 174 KIEAK---------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQ 224
I+ K K ++ KIFVGGLS E++K +F QFG + + + +DK+ ++
Sbjct: 68 TIDPKVAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNR 127
Query: 225 RKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE--PFGVRG 271
+ F F+TFE+E VV + + +IN+K V+ KKA PK P G RG
Sbjct: 128 HRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMFPPGTRG 176
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 59/116 (50%), Gaps = 12/116 (10%)
Query: 75 VSCSHHYYLFDQILRTHFFYIMEAKNKMVSHPGIV-------HKITEELKEHFSKYGEIE 127
V H+ L + + + A+ KMV+ + + + E++K++F ++G++E
Sbjct: 56 VLAQPHHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVE 115
Query: 128 NVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNKKIEAKKAKAK 183
+ L D T R RGF F+ F++ + +EK V H INNK +E KKA+ K
Sbjct: 116 DAMLMFDKTTNRHRGFGFVTFENEDVVEK-----VCEIHFHEINNKMVECKKAQPK 166
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 44/77 (57%)
Query: 187 IFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNP 246
+F+GGLS + + ++ +F++FG I E + D + + + F F+TF + V +L P
Sbjct: 1 MFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLAQP 60
Query: 247 KQKINDKEVDVKKATPK 263
+++ K +D K A P+
Sbjct: 61 HHELDSKTIDPKVAFPR 77
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 29/43 (67%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+ L+++FSK+GEI + DP T RSRGF F+ F D S++K
Sbjct: 13 DSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDK 55
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 52/98 (53%), Gaps = 9/98 (9%)
Query: 569 VSCSHYHYLFDQNLRTHYFYIVEAKNKMVSHPGIV-------DKITEELKEHFSKYGEIE 621
V +H L + + + A+ KMV+ + + + E++K++F ++G++E
Sbjct: 56 VLAQPHHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVE 115
Query: 622 NVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFY 659
+ L D T R RGF F+ F++ + +EK V +++F+
Sbjct: 116 DAMLMFDKTTNRHRGFGFVTFENEDVVEK--VCEIHFH 151
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 35/56 (62%), Gaps = 2/56 (3%)
Query: 452 YDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE--PFGVRG 505
+DK+ ++ + F F+TFE+E VV + + +IN+K V+ KKA PK P G RG
Sbjct: 121 FDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMFPPGTRG 176
>gi|311276597|ref|XP_003135272.1| PREDICTED: hypothetical protein LOC100511612 [Sus scrofa]
Length = 399
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 72/191 (37%), Positives = 106/191 (55%), Gaps = 13/191 (6%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
GI I+++ L E+ +++GEI + +K+ P+TG SRGF F++FKD+ ASVE V+
Sbjct: 39 GISRNISKQALLEYLTQFGEILDFIIKTYPDTGLSRGFGFVLFKDS-----ASVEKVLQV 93
Query: 166 GNHVINNKKIEAKKAKA-----KSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDK 220
H ++ K I+ K+AKA K+FVGGL+P M +E+I+ +F FG I E+P
Sbjct: 94 EEHKVDGKMIDLKRAKAMEVKFPPRKVFVGGLNPRMSEEKIREYFGAFGMIENIELPVCP 153
Query: 221 SKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGVRGGRGGRGGRG 280
++R+ FCFIT+ E V LL+ I ++K A PK + RGGR
Sbjct: 154 RMNERRAFCFITYTDEKPVRKLLETRYHLIGSGRCEIKIALPK--AYVKSQHRGGREFPF 211
Query: 281 GRGGRMAGGYG 291
R G GG G
Sbjct: 212 ARVGNRWGGIG 222
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 38/51 (74%), Gaps = 1/51 (1%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
GI I+++ L E+ +++GEI + +K+ P+TG SRGF F++FKD+ S+EK
Sbjct: 39 GISRNISKQALLEYLTQFGEILDFIIKTYPDTGLSRGFGFVLFKDSASVEK 89
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 47/86 (54%)
Query: 175 IEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFE 234
I+A K + + K+F+GG+S + + + + QFG I++ + + F F+ F+
Sbjct: 23 IKASKNQYDASKMFIGGISRNISKQALLEYLTQFGEILDFIIKTYPDTGLSRGFGFVLFK 82
Query: 235 HESVVIDLLKNPKQKINDKEVDVKKA 260
+ V +L+ + K++ K +D+K+A
Sbjct: 83 DSASVEKVLQVEEHKVDGKMIDLKRA 108
>gi|339248325|ref|XP_003375796.1| RNA-binding protein squid [Trichinella spiralis]
gi|316970795|gb|EFV54670.1| RNA-binding protein squid [Trichinella spiralis]
Length = 329
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 60/150 (40%), Positives = 90/150 (60%), Gaps = 6/150 (4%)
Query: 115 ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNKK 174
+L HF+++G++ +V +K D TGRSRGFAF+ F E+ +KA +A+ + + KK
Sbjct: 73 DLTNHFNQFGDVVHVQVKYDHYTGRSRGFAFVEFATAEACKKA-----LAKKDAELKGKK 127
Query: 175 IEAKKAKAKSGK-IFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
E K AK++ K +FVGGL + +E ++ H QFG + E E P+DK ++RKNF FI F
Sbjct: 128 CEVKPAKSRENKKLFVGGLPSDYTEELLRKHMEQFGRVEEIEWPFDKVNNKRKNFAFIVF 187
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKATPK 263
E + PKQ+ D+ DVK A P+
Sbjct: 188 EDDDGAAAAAALPKQRFGDRTCDVKIAVPQ 217
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 44/86 (51%)
Query: 178 KKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHES 237
K+ K + KIFVGG+S + + ++ HF QFG+++ ++ YD + + F F+ F
Sbjct: 51 KREKNEERKIFVGGISWDTNENDLTNHFNQFGDVVHVQVKYDHYTGRSRGFAFVEFATAE 110
Query: 238 VVIDLLKNPKQKINDKEVDVKKATPK 263
L ++ K+ +VK A +
Sbjct: 111 ACKKALAKKDAELKGKKCEVKPAKSR 136
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 43/96 (44%), Gaps = 4/96 (4%)
Query: 445 IIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGVR 504
+ E E P+DK ++RKNF FI FE + PKQ+ D+ DVK A P+ +R
Sbjct: 165 VEEIEWPFDKVNNKRKNFAFIVFEDDDGAAAAAALPKQRFGDRTCDVKIAVPQY----MR 220
Query: 505 GGRGGRGGRGGRGGRMAGGYGGYGGYGGGYGELDYL 540
+ G + Y GY GYG G Y
Sbjct: 221 PQKTAGPGMSQQWPGHYHDYSGYSGYGSNAGHYGYF 256
Score = 46.6 bits (109), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 32/48 (66%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
D +L HF+++G++ +V +K D TGRSRGFAF+ F E+ +KA
Sbjct: 68 DTNENDLTNHFNQFGDVVHVQVKYDHYTGRSRGFAFVEFATAEACKKA 115
>gi|390463506|ref|XP_002748435.2| PREDICTED: RNA-binding protein Musashi homolog 2, partial
[Callithrix jacchus]
Length = 295
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 65/170 (38%), Positives = 100/170 (58%), Gaps = 16/170 (9%)
Query: 113 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINN 172
T+ L+++FSK+GEI + DP T RSRGF F+ F D ASV+ V+ + +H +++
Sbjct: 1 TDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFAD-----PASVDKVLGQPHHELDS 55
Query: 173 KKIEAK---------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKS 223
K I+ K K ++ KIFVGGLS E++K +F QFG + + + +DK+ +
Sbjct: 56 KTIDPKVAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTN 115
Query: 224 QRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE--PFGVRG 271
+ + F F+TFE+E VV + + +IN+K V+ KKA PK P G RG
Sbjct: 116 RHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMFPPGTRG 165
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 68/133 (51%), Gaps = 19/133 (14%)
Query: 58 SFSENCLLEDSIGKPLTVSCSHHYYLFDQILRTHFFYIMEAKNKMVSHPGIV-------H 110
+F++ ++ +G+P H+ L + + + A+ KMV+ + +
Sbjct: 35 TFADPASVDKVLGQP-------HHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSAN 87
Query: 111 KITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVI 170
+ E++K++F ++G++E+ L D T R RGF F+ F++ + +EK V H I
Sbjct: 88 TVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEK-----VCEIHFHEI 142
Query: 171 NNKKIEAKKAKAK 183
NNK +E KKA+ K
Sbjct: 143 NNKMVECKKAQPK 155
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 30/44 (68%)
Query: 607 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
T+ L+++FSK+GEI + DP T RSRGF F+ F D S++K
Sbjct: 1 TDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDK 44
Score = 47.0 bits (110), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 61/115 (53%), Gaps = 16/115 (13%)
Query: 552 SFSENCLLEDSIGKPLTVSCSHYHYLFDQNLRTHYFYIVEAKNKMVSHPGIV-------D 604
+F++ ++ +G+P +H L + + + A+ KMV+ + +
Sbjct: 35 TFADPASVDKVLGQP-------HHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSAN 87
Query: 605 KITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFY 659
+ E++K++F ++G++E+ L D T R RGF F+ F++ + +EK V +++F+
Sbjct: 88 TVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEK--VCEIHFH 140
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 35/56 (62%), Gaps = 2/56 (3%)
Query: 452 YDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE--PFGVRG 505
+DK+ ++ + F F+TFE+E VV + + +IN+K V+ KKA PK P G RG
Sbjct: 110 FDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMFPPGTRG 165
>gi|148683901|gb|EDL15848.1| Musashi homolog 2 (Drosophila), isoform CRA_c [Mus musculus]
Length = 296
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 65/170 (38%), Positives = 100/170 (58%), Gaps = 16/170 (9%)
Query: 113 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINN 172
T+ L+++FSK+GEI + DP T RSRGF F+ F D ASV+ V+ + +H +++
Sbjct: 2 TDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFAD-----PASVDKVLGQPHHELDS 56
Query: 173 KKIEAK---------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKS 223
K I+ K K ++ KIFVGGLS E++K +F QFG + + + +DK+ +
Sbjct: 57 KTIDPKVAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTN 116
Query: 224 QRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE--PFGVRG 271
+ + F F+TFE+E VV + + +IN+K V+ KKA PK P G RG
Sbjct: 117 RHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMFPPGTRG 166
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 68/133 (51%), Gaps = 19/133 (14%)
Query: 58 SFSENCLLEDSIGKPLTVSCSHHYYLFDQILRTHFFYIMEAKNKMVSHPGIV-------H 110
+F++ ++ +G+P H+ L + + + A+ KMV+ + +
Sbjct: 36 TFADPASVDKVLGQP-------HHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSAN 88
Query: 111 KITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVI 170
+ E++K++F ++G++E+ L D T R RGF F+ F++ + +EK V H I
Sbjct: 89 TVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEK-----VCEIHFHEI 143
Query: 171 NNKKIEAKKAKAK 183
NNK +E KKA+ K
Sbjct: 144 NNKMVECKKAQPK 156
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 30/44 (68%)
Query: 607 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
T+ L+++FSK+GEI + DP T RSRGF F+ F D S++K
Sbjct: 2 TDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDK 45
Score = 47.0 bits (110), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 61/115 (53%), Gaps = 16/115 (13%)
Query: 552 SFSENCLLEDSIGKPLTVSCSHYHYLFDQNLRTHYFYIVEAKNKMVSHPGIV-------D 604
+F++ ++ +G+P +H L + + + A+ KMV+ + +
Sbjct: 36 TFADPASVDKVLGQP-------HHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSAN 88
Query: 605 KITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFY 659
+ E++K++F ++G++E+ L D T R RGF F+ F++ + +EK V +++F+
Sbjct: 89 TVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEK--VCEIHFH 141
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 35/56 (62%), Gaps = 2/56 (3%)
Query: 452 YDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE--PFGVRG 505
+DK+ ++ + F F+TFE+E VV + + +IN+K V+ KKA PK P G RG
Sbjct: 111 FDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMFPPGTRG 166
>gi|25121993|ref|NP_733839.1| RNA-binding protein Musashi homolog 2 isoform b [Homo sapiens]
gi|332848594|ref|XP_003315679.1| PREDICTED: uncharacterized protein LOC748578 [Pan troglodytes]
gi|426347417|ref|XP_004041349.1| PREDICTED: RNA-binding protein Musashi homolog 2 [Gorilla gorilla
gorilla]
gi|21752839|dbj|BAC04244.1| unnamed protein product [Homo sapiens]
gi|119614916|gb|EAW94510.1| musashi homolog 2 (Drosophila), isoform CRA_e [Homo sapiens]
Length = 251
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 76/206 (36%), Positives = 111/206 (53%), Gaps = 23/206 (11%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+ L+++FSK+GEI + DP T RSRGF F+ F D ASV+ V+ + +H +++K
Sbjct: 31 DSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFAD-----PASVDKVLGQPHHELDSK 85
Query: 174 KIEAK---------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQ 224
I+ K K ++ KIFVGGLS E++K +F QFG + + + +DK+ ++
Sbjct: 86 TIDPKVAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNR 145
Query: 225 RKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE--PFGVRGGRGGRGGRGGR 282
+ F F+TFE+E VV + + +IN+K V+ KKA PK P G RG RG
Sbjct: 146 HRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMFPPGTRG--RARGLPYTM 203
Query: 283 GGRMAG-GYGGY----GGYGGGYGGI 303
M G G GY YG GY G
Sbjct: 204 DAFMLGMGMLGYPNFVATYGRGYPGF 229
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 68/133 (51%), Gaps = 19/133 (14%)
Query: 58 SFSENCLLEDSIGKPLTVSCSHHYYLFDQILRTHFFYIMEAKNKMVSHPGIV-------H 110
+F++ ++ +G+P H+ L + + + A+ KMV+ + +
Sbjct: 64 TFADPASVDKVLGQP-------HHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSAN 116
Query: 111 KITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVI 170
+ E++K++F ++G++E+ L D T R RGF F+ F++ + +EK V H I
Sbjct: 117 TVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEK-----VCEIHFHEI 171
Query: 171 NNKKIEAKKAKAK 183
NNK +E KKA+ K
Sbjct: 172 NNKMVECKKAQPK 184
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 47/82 (57%)
Query: 182 AKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVID 241
+ S K+F+GGLS + + ++ +F++FG I E + D + + + F F+TF + V
Sbjct: 14 SPSSKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDK 73
Query: 242 LLKNPKQKINDKEVDVKKATPK 263
+L P +++ K +D K A P+
Sbjct: 74 VLGQPHHELDSKTIDPKVAFPR 95
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
+ L+++FSK+GEI + DP T RSRGF F+ F D S++K
Sbjct: 31 DSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKV 74
Score = 46.2 bits (108), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 61/115 (53%), Gaps = 16/115 (13%)
Query: 552 SFSENCLLEDSIGKPLTVSCSHYHYLFDQNLRTHYFYIVEAKNKMVSHPGIV-------D 604
+F++ ++ +G+P +H L + + + A+ KMV+ + +
Sbjct: 64 TFADPASVDKVLGQP-------HHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSAN 116
Query: 605 KITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFY 659
+ E++K++F ++G++E+ L D T R RGF F+ F++ + +EK V +++F+
Sbjct: 117 TVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEK--VCEIHFH 169
Score = 43.5 bits (101), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 54/113 (47%), Gaps = 19/113 (16%)
Query: 452 YDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE--PFGVRGGRGG 509
+DK+ ++ + F F+TFE+E VV + + +IN+K V+ KKA PK P G RG G
Sbjct: 139 FDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMFPPGTRGRARG 198
Query: 510 RG--------GRGGRG-GRMAGGYG-GYGGYGGGYGELDYLQLWQFFDWISSS 552
G G G YG GY G+ YG +QF D++ S
Sbjct: 199 LPYTMDAFMLGMGMLGYPNFVATYGRGYPGFAPSYG-------YQFPDYLPVS 244
>gi|443691822|gb|ELT93572.1| hypothetical protein CAPTEDRAFT_180669 [Capitella teleta]
Length = 243
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 65/163 (39%), Positives = 94/163 (57%), Gaps = 18/163 (11%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
E L+E+F+KYGEI + DP T RSRGF F+ F D ASV+ V+A G H +++K
Sbjct: 38 EGLREYFAKYGEISECMVMRDPITKRSRGFGFVTFSDP-----ASVDKVLANGPHELDSK 92
Query: 174 KIEAK-------------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDK 220
I+ K K K+ KIFVGGLS +++K +F QFG I + + +DK
Sbjct: 93 VIDPKVAFPRRPNTANQPKLVTKTKKIFVGGLSASTTVDDVKQYFEQFGKIEDAMLMFDK 152
Query: 221 SKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ + + F F+TFE+E VV + + +IN+K V+ KKA PK
Sbjct: 153 ATQRHRGFAFVTFENEDVVDKVCEIHFHEINNKMVECKKAQPK 195
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 44/71 (61%), Gaps = 5/71 (7%)
Query: 113 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINN 172
+++K++F ++G+IE+ L D T R RGFAF+ F++ + ++K V H INN
Sbjct: 130 VDDVKQYFEQFGKIEDAMLMFDKATQRHRGFAFVTFENEDVVDK-----VCEIHFHEINN 184
Query: 173 KKIEAKKAKAK 183
K +E KKA+ K
Sbjct: 185 KMVECKKAQPK 195
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 45/79 (56%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GK+F+GGLS + E ++ +FA++G I E + D + + F F+TF + V +L
Sbjct: 24 GKMFIGGLSWQTTPEGLREYFAKYGEISECMVMRDPITKRSRGFGFVTFSDPASVDKVLA 83
Query: 245 NPKQKINDKEVDVKKATPK 263
N +++ K +D K A P+
Sbjct: 84 NGPHELDSKVIDPKVAFPR 102
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 29/44 (65%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
E L+E+F+KYGEI + DP T RSRGF F+ F D S++K
Sbjct: 38 EGLREYFAKYGEISECMVMRDPITKRSRGFGFVTFSDPASVDKV 81
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 37/53 (69%), Gaps = 2/53 (3%)
Query: 607 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFY 659
+++K++F ++G+IE+ L D T R RGFAF+ F++ + ++K V +++F+
Sbjct: 130 VDDVKQYFEQFGKIEDAMLMFDKATQRHRGFAFVTFENEDVVDK--VCEIHFH 180
Score = 40.4 bits (93), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 34/54 (62%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 497
+I + + +DK+ + + F F+TFE+E VV + + +IN+K V+ KKA PK
Sbjct: 142 KIEDAMLMFDKATQRHRGFAFVTFENEDVVDKVCEIHFHEINNKMVECKKAQPK 195
>gi|296416057|ref|XP_002837697.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295633580|emb|CAZ81888.1| unnamed protein product [Tuber melanosporum]
Length = 691
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 57/150 (38%), Positives = 91/150 (60%), Gaps = 1/150 (0%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
E LKE+FS+YGE+ T+ D TGRSRGF F+ FKD +++ V++ +G +I+ K
Sbjct: 182 ESLKEYFSQYGEVVECTVMRDGPTGRSRGFGFLTFKDPKTVNIVMVKEHYLDG-KIIDPK 240
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
+ + + K+ KIFVGG+S E + + + +F QFG +++ + DK + + F F+TF
Sbjct: 241 RAIPRDEQEKTSKIFVGGVSQEATETDFREYFTQFGRVLDATLMMDKDTGRPRGFGFVTF 300
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ E V + L P I DK ++VKKA P+
Sbjct: 301 DSEGAVENALNCPTLAILDKPIEVKKAQPR 330
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 56/95 (58%), Gaps = 3/95 (3%)
Query: 172 NKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFI 231
+ + A + GK+F+GGL+ E DE +K +F+Q+G ++E + D + + F F+
Sbjct: 155 DPQATGSPAIKEDGKMFIGGLNWETTDESLKEYFSQYGEVVECTVMRDGPTGRSRGFGFL 214
Query: 232 TF-EHESVVIDLLKNPKQKINDKEVDVKKATPKPE 265
TF + ++V I ++K + ++ K +D K+A P+ E
Sbjct: 215 TFKDPKTVNIVMVK--EHYLDGKIIDPKRAIPRDE 247
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 34/51 (66%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYF 658
E LKE+FS+YGE+ T+ D TGRSRGF F+ FKD +++ V++ Y
Sbjct: 182 ESLKEYFSQYGEVVECTVMRDGPTGRSRGFGFLTFKDPKTVNIVMVKEHYL 232
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Query: 601 GIVDKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
G+ + TE + +E+F+++G + + TL D +TGR RGF F+ F ++E A
Sbjct: 258 GVSQEATETDFREYFTQFGRVLDATLMMDKDTGRPRGFGFVTFDSEGAVENA 309
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 30/53 (56%)
Query: 445 IIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 497
+++ + DK + + F F+TF+ E V + L P I DK ++VKKA P+
Sbjct: 278 VLDATLMMDKDTGRPRGFGFVTFDSEGAVENALNCPTLAILDKPIEVKKAQPR 330
>gi|313235219|emb|CBY10784.1| unnamed protein product [Oikopleura dioica]
Length = 321
Score = 112 bits (281), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 60/151 (39%), Positives = 98/151 (64%), Gaps = 5/151 (3%)
Query: 113 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINN 172
TE LK +F+ +G++++V +K DPNT +SRGF F++F + + SVE V+A+ +H ++
Sbjct: 60 TESLKAYFANFGDVQDVVVKVDPNTQQSRGFGFVLF-----INEDSVEAVVAQQHHELDG 114
Query: 173 KKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFIT 232
KKI+ KKA+ + GK+FVGG+ P D+EI+A+F QFG + E P +K ++ K FCF+
Sbjct: 115 KKIDPKKAQRRDGKMFVGGVLPATSDDEIRAYFEQFGEVEEIIRPVNKESNENKPFCFVL 174
Query: 233 FEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
F+ + ++ K +IN K + K + PK
Sbjct: 175 FKRDGILSKCTKQRFHEINGKRCECKASFPK 205
Score = 45.4 bits (106), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 45/77 (58%)
Query: 184 SGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLL 243
+ K+FVGGLS E +KA+FA FG++ + + D + Q + F F+ F +E V ++
Sbjct: 46 NAKMFVGGLSKNTTTESLKAYFANFGDVQDVVVKVDPNTQQSRGFGFVLFINEDSVEAVV 105
Query: 244 KNPKQKINDKEVDVKKA 260
+++ K++D KKA
Sbjct: 106 AQQHHELDGKKIDPKKA 122
Score = 39.3 bits (90), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 34/43 (79%)
Query: 607 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLE 649
TE LK +F+ +G++++V +K DPNT +SRGF F++F + +S+E
Sbjct: 60 TESLKAYFANFGDVQDVVVKVDPNTQQSRGFGFVLFINEDSVE 102
>gi|296193572|ref|XP_002744572.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B-like
[Callithrix jacchus]
Length = 256
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 59/129 (45%), Positives = 85/129 (65%), Gaps = 9/129 (6%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++LK++F+K+GE+ + T+K DPNTGRSRGF FI+FKD ASVE V+ + H ++ +
Sbjct: 13 KDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDA-----ASVEKVLDQKEHRLDGR 67
Query: 174 KIEAKKAKAKS----GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFC 229
I+ KKA A KIFVGGL+PE +E+I+ +F FG I E+P ++R+ F
Sbjct: 68 VIDPKKAMAMKKDPVKKIFVGGLNPEATEEKIREYFGDFGEIEAIELPMHPKLNKRRGFV 127
Query: 230 FITFEHESV 238
FITF+ SV
Sbjct: 128 FITFKERSV 136
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 38/48 (79%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
D ++LK++F+K+GE+ + T+K DPNTGRSRGF FI+FKD S+EK
Sbjct: 9 DTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKV 56
Score = 46.2 bits (108), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 44/74 (59%)
Query: 187 IFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNP 246
+FVGGLS + +++K +F +FG +++ + D + + + F FI F+ + V +L
Sbjct: 1 MFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQK 60
Query: 247 KQKINDKEVDVKKA 260
+ +++ + +D KKA
Sbjct: 61 EHRLDGRVIDPKKA 74
Score = 39.7 bits (91), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 30/49 (61%), Gaps = 3/49 (6%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKD---TESLEKASV 653
E+++E+F +GEIE + L P + RGF FI FK+ + LEK+ +
Sbjct: 97 EKIREYFGDFGEIEAIELPMHPKLNKRRGFVFITFKERSVKKVLEKSFI 145
>gi|189234173|ref|XP_968418.2| PREDICTED: similar to heterogeneous nuclear ribonucleoprotein
[Tribolium castaneum]
Length = 373
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 70/188 (37%), Positives = 103/188 (54%), Gaps = 13/188 (6%)
Query: 113 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINN 172
+E+L+E+F +G + +V + DP T RSRGF FI F E +SV++V+ H ++
Sbjct: 69 SEKLREYFGMFGNVTDVLIMKDPVTQRSRGFGFITFS-----EPSSVDNVLKVPIHTLDG 123
Query: 173 KKIEAKKAKAK--------SGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQ 224
KKI+ K A K + KIFVGG+S + +E+KA+F+QFG + ET M D+ +
Sbjct: 124 KKIDPKHATPKNRPKQPNKTKKIFVGGVSQDTSADEVKAYFSQFGKVEETVMLMDQQTKR 183
Query: 225 RKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGVRGGRGGRGGRGGRGG 284
+ F F+TFE+E VV + + I +K+V+ KKA PK G R G G
Sbjct: 184 HRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPKEAVQASAQLLGKRLMLSGLGM 243
Query: 285 RMAGGYGG 292
RMA G
Sbjct: 244 RMATPTAG 251
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 49/82 (59%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GK+FVGGLS + E+++ +F FGN+ + + D + + F FITF S V ++LK
Sbjct: 56 GKLFVGGLSWQTSSEKLREYFGMFGNVTDVLIMKDPVTQRSRGFGFITFSEPSSVDNVLK 115
Query: 245 NPKQKINDKEVDVKKATPKPEP 266
P ++ K++D K ATPK P
Sbjct: 116 VPIHTLDGKKIDPKHATPKNRP 137
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 29/43 (67%)
Query: 607 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLE 649
+E+L+E+F +G + +V + DP T RSRGF FI F + S++
Sbjct: 69 SEKLREYFGMFGNVTDVLIMKDPVTQRSRGFGFITFSEPSSVD 111
Score = 42.0 bits (97), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 37/57 (64%), Gaps = 2/57 (3%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFYS 660
D +E+K +FS++G++E + D T R RGF F+ F++ + +++ V +++F++
Sbjct: 154 DTSADEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEDVVDR--VCEIHFHT 208
Score = 39.7 bits (91), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 40/83 (48%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGV 503
++ ET M D+ + + F F+TFE+E VV + + I +K+V+ KKA PK
Sbjct: 169 KVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPKEAVQAS 228
Query: 504 RGGRGGRGGRGGRGGRMAGGYGG 526
G R G G RMA G
Sbjct: 229 AQLLGKRLMLSGLGMRMATPTAG 251
>gi|194228090|ref|XP_001491392.2| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like [Equus
caballus]
Length = 391
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 69/199 (34%), Positives = 107/199 (53%), Gaps = 17/199 (8%)
Query: 116 LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNKKI 175
L ++ S++GE+ + +K P TG SRGF F++FKD+ A+VE V+ H ++ K I
Sbjct: 112 LLDYLSQFGEVVDFIIKIHPGTGLSRGFGFVLFKDS-----ATVEKVLQVKEHKLDGKTI 166
Query: 176 EAKKAKA-----KSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCF 230
+ ++AKA K+FVGGL+P + +E+I+ +F FG I + ++P + ++R+ FCF
Sbjct: 167 QLRRAKAVVSRFPPKKVFVGGLNPRLSEEKIRQYFGTFGVIQDIKLPVNSKTNERRAFCF 226
Query: 231 ITFEHESVVIDLLKNPKQKINDKEVDVKKATPKP-EPFGVRGGRGG-----RGGRGGRGG 284
IT+ E V LL+ +I + +VK A PK + GGR R GRG
Sbjct: 227 ITYADEKAVRKLLETRYHRIGSRRCEVKIAFPKEYKRLRQLGGRDAPFARLSSSRDGRGV 286
Query: 285 RM-AGGYGGYGGYGGGYGG 302
R G GG +GG
Sbjct: 287 RADPSACGANQNVGGAFGG 305
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
G+ ++++ L ++ S++GE+ + +K P TG SRGF F++FKD+ ++EK
Sbjct: 102 GLSGNVSKQGLLDYLSQFGEVVDFIIKIHPGTGLSRGFGFVLFKDSATVEK 152
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/87 (22%), Positives = 47/87 (54%)
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
+IEA + + K+F+GGLS + + + + +QFG +++ + + F F+ F
Sbjct: 85 RIEATRNQQDGSKMFIGGLSGNVSKQGLLDYLSQFGEVVDFIIKIHPGTGLSRGFGFVLF 144
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKA 260
+ + V +L+ + K++ K + +++A
Sbjct: 145 KDSATVEKVLQVKEHKLDGKTIQLRRA 171
Score = 42.4 bits (98), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 44/99 (44%), Gaps = 17/99 (17%)
Query: 445 IIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKP------ 498
I + ++P + ++R+ FCFIT+ E V LL+ +I + +VK A PK
Sbjct: 207 IQDIKLPVNSKTNERRAFCFITYADEKAVRKLLETRYHRIGSRRCEVKIAFPKEYKRLRQ 266
Query: 499 -----EPFG-VRGGRGGRGGRG-----GRGGRMAGGYGG 526
PF + R GRG R G + G +GG
Sbjct: 267 LGGRDAPFARLSSSRDGRGVRADPSACGANQNVGGAFGG 305
>gi|268536918|ref|XP_002633594.1| C. briggsae CBR-SQD-1 protein [Caenorhabditis briggsae]
Length = 301
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 73/208 (35%), Positives = 97/208 (46%), Gaps = 20/208 (9%)
Query: 113 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINN 172
E+L HF+KYGE+ +K D GRSRGFAF+ F E + A ++ I
Sbjct: 42 NEDLNSHFTKYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLA-----LSAREQTIKG 96
Query: 173 KKIEAKKAKAKSGK-IFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFI 231
K +E K AK++ K +FVGGL + + E++ HF QFG + + E P+DK R+NF FI
Sbjct: 97 KSVEVKPAKSRENKKVFVGGLPSDYSEAELRTHFEQFGKVDDIEWPFDKQTKTRRNFAFI 156
Query: 232 TFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGVRGGR--------------GGRG 277
FE E KQ +E DVKKA P+ + F GR
Sbjct: 157 VFEEEESADKASSQTKQTFGTRECDVKKAVPQGKRFPPGQGRMPGGRGMYGGRGGNNNSA 216
Query: 278 GRGGRGGRMAGGYGGYGGYGGGYGGILY 305
G G A YG G +G YG Y
Sbjct: 217 WYAGWGQIGAVPYGTTGAWGDWYGNGYY 244
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 46/78 (58%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
KIFVGG+SPE+ +E++ +HF ++G + + ++ YD++ + + F F+ F L
Sbjct: 30 KIFVGGISPEVNNEDLNSHFTKYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALSA 89
Query: 246 PKQKINDKEVDVKKATPK 263
+Q I K V+VK A +
Sbjct: 90 REQTIKGKSVEVKPAKSR 107
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 32/64 (50%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGV 503
++ + E P+DK R+NF FI FE E KQ +E DVKKA P+ + F
Sbjct: 135 KVDDIEWPFDKQTKTRRNFAFIVFEEEESADKASSQTKQTFGTRECDVKKAVPQGKRFPP 194
Query: 504 RGGR 507
GR
Sbjct: 195 GQGR 198
Score = 46.2 bits (108), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 27/45 (60%)
Query: 607 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
E+L HF+KYGE+ +K D GRSRGFAF+ F E + A
Sbjct: 42 NEDLNSHFTKYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLA 86
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 593 KNKMVSHPGIVDKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
+NK V G+ +E EL+ HF ++G+++++ D T R FAFIVF++ ES +KA
Sbjct: 108 ENKKVFVGGLPSDYSEAELRTHFEQFGKVDDIEWPFDKQTKTRRNFAFIVFEEEESADKA 167
Query: 652 SVE 654
S +
Sbjct: 168 SSQ 170
>gi|313235107|emb|CBY24978.1| unnamed protein product [Oikopleura dioica]
Length = 258
Score = 112 bits (280), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 98/166 (59%), Gaps = 7/166 (4%)
Query: 99 KNKMVSHPGIVHKIT-EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 157
+NKM G+ K T E + +F YG++++V +K+DP+TG SRGF F++F ES+ K
Sbjct: 21 ENKMFVG-GLSKKTTVEAFRTYFEAYGDVKDVVVKTDPSTGTSRGFGFVMFTAEESIGK- 78
Query: 158 SVEDVIAEGNHVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMP 217
V+A G H ++ K+I+ KKA+ + GK+FVGG+ + E IK +F+QFG + + P
Sbjct: 79 ----VLAAGPHNLDGKRIDPKKAERRDGKMFVGGVKSDTTVETIKEYFSQFGEVESVDRP 134
Query: 218 YDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+K ++ K FCF+ F + V +K +I+ K + K+ K
Sbjct: 135 VNKQTNENKPFCFVIFRKDGVNSKCIKQRYHEIDGKRCECKEGIAK 180
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 593 KNKMVSHPGIVDKIT-EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+NKM G+ K T E + +F YG++++V +K+DP+TG SRGF F++F ES+ K
Sbjct: 21 ENKMFVG-GLSKKTTVEAFRTYFEAYGDVKDVVVKTDPSTGTSRGFGFVMFTAEESIGK 78
>gi|146415028|ref|XP_001483484.1| hypothetical protein PGUG_04213 [Meyerozyma guilliermondii ATCC
6260]
Length = 306
Score = 112 bits (280), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 63/163 (38%), Positives = 99/163 (60%), Gaps = 12/163 (7%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ TE+ L E+FSK+GE+ + T+ D TG+SRGF F+ FKDT+S+ D + +
Sbjct: 5 GLNWDTTEQGLVEYFSKFGEVVDHTIMRDSATGKSRGFGFLTFKDTKSV------DAVIQ 58
Query: 166 GNHVINNKKIEAKKAKA-----KSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDK 220
G+HV++ K I+ K+A A K GKIFVGG+ P + ++E F+QFG+II+ ++ DK
Sbjct: 59 GDHVLDGKLIDPKRAIAREEQDKVGKIFVGGIDPMVNEKEFHDFFSQFGSIIDAQLMIDK 118
Query: 221 SKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ + F FITF+ V + N + K ++VK+A P+
Sbjct: 119 DTGRSRGFGFITFDSPEAVDRVTVNKFLTLKGKSMEVKRAEPR 161
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 33/46 (71%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLE 649
D + L E+FSK+GE+ + T+ D TG+SRGF F+ FKDT+S++
Sbjct: 9 DTTEQGLVEYFSKFGEVVDHTIMRDSATGKSRGFGFLTFKDTKSVD 54
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Query: 601 GIVDKITEELKEH--FSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASV 653
G +D + E + H FS++G I + L D +TGRSRGF FI F E++++ +V
Sbjct: 88 GGIDPMVNEKEFHDFFSQFGSIIDAQLMIDKDTGRSRGFGFITFDSPEAVDRVTV 142
>gi|354497473|ref|XP_003510844.1| PREDICTED: RNA-binding protein Musashi homolog 1-like [Cricetulus
griseus]
Length = 510
Score = 112 bits (280), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 59/161 (36%), Positives = 96/161 (59%), Gaps = 14/161 (8%)
Query: 112 ITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVIN 171
+TE L+E+F ++GE++ + DP T RSRGF F+ F D +A V+ V+A+ H ++
Sbjct: 180 VTEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMD-----QAGVDKVLAQSRHELD 234
Query: 172 NKKIEAK---------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSK 222
+K I+ K K ++ KIFVGGLS E++K +F QFG + + + +DK+
Sbjct: 235 SKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTT 294
Query: 223 SQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
++ + F F+TFE E +V + + +IN+K V+ KKA PK
Sbjct: 295 NRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPK 335
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 44/75 (58%), Gaps = 5/75 (6%)
Query: 109 VHKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNH 168
V+ E++K++F ++G++++ L D T R RGF F+ F+ + +EK V H
Sbjct: 266 VNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEK-----VCEIHFH 320
Query: 169 VINNKKIEAKKAKAK 183
INNK +E KKA+ K
Sbjct: 321 EINNKMVECKKAQPK 335
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 31/50 (62%)
Query: 606 ITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVED 655
+TE L+E+F ++GE++ + DP T RSRGF F+ F D ++K +
Sbjct: 180 VTEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQS 229
Score = 43.5 bits (101), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 37/57 (64%), Gaps = 2/57 (3%)
Query: 603 VDKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFY 659
V+ E++K++F ++G++++ L D T R RGF F+ F+ + +EK V +++F+
Sbjct: 266 VNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEK--VCEIHFH 320
Score = 40.0 bits (92), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 30/46 (65%)
Query: 452 YDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 497
+DK+ ++ + F F+TFE E +V + + +IN+K V+ KKA PK
Sbjct: 290 FDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPK 335
>gi|270002456|gb|EEZ98903.1| hypothetical protein TcasGA2_TC004519 [Tribolium castaneum]
Length = 358
Score = 112 bits (280), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 69/183 (37%), Positives = 102/183 (55%), Gaps = 13/183 (7%)
Query: 113 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINN 172
+E+L+E+F +G + +V + DP T RSRGF FI F E +SV++V+ H ++
Sbjct: 54 SEKLREYFGMFGNVTDVLIMKDPVTQRSRGFGFITFS-----EPSSVDNVLKVPIHTLDG 108
Query: 173 KKIEAKKAKAK--------SGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQ 224
KKI+ K A K + KIFVGG+S + +E+KA+F+QFG + ET M D+ +
Sbjct: 109 KKIDPKHATPKNRPKQPNKTKKIFVGGVSQDTSADEVKAYFSQFGKVEETVMLMDQQTKR 168
Query: 225 RKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGVRGGRGGRGGRGGRGG 284
+ F F+TFE+E VV + + I +K+V+ KKA PK G R G G
Sbjct: 169 HRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPKEAVQASAQLLGKRLMLSGLGM 228
Query: 285 RMA 287
RMA
Sbjct: 229 RMA 231
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 49/82 (59%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GK+FVGGLS + E+++ +F FGN+ + + D + + F FITF S V ++LK
Sbjct: 41 GKLFVGGLSWQTSSEKLREYFGMFGNVTDVLIMKDPVTQRSRGFGFITFSEPSSVDNVLK 100
Query: 245 NPKQKINDKEVDVKKATPKPEP 266
P ++ K++D K ATPK P
Sbjct: 101 VPIHTLDGKKIDPKHATPKNRP 122
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 29/43 (67%)
Query: 607 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLE 649
+E+L+E+F +G + +V + DP T RSRGF FI F + S++
Sbjct: 54 SEKLREYFGMFGNVTDVLIMKDPVTQRSRGFGFITFSEPSSVD 96
Score = 42.0 bits (97), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 37/57 (64%), Gaps = 2/57 (3%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFYS 660
D +E+K +FS++G++E + D T R RGF F+ F++ + +++ V +++F++
Sbjct: 139 DTSADEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEDVVDR--VCEIHFHT 193
Score = 39.3 bits (90), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 39/78 (50%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGV 503
++ ET M D+ + + F F+TFE+E VV + + I +K+V+ KKA PK
Sbjct: 154 KVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPKEAVQAS 213
Query: 504 RGGRGGRGGRGGRGGRMA 521
G R G G RMA
Sbjct: 214 AQLLGKRLMLSGLGMRMA 231
>gi|255726600|ref|XP_002548226.1| hypothetical protein CTRG_02523 [Candida tropicalis MYA-3404]
gi|240134150|gb|EER33705.1| hypothetical protein CTRG_02523 [Candida tropicalis MYA-3404]
Length = 472
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 62/163 (38%), Positives = 96/163 (58%), Gaps = 12/163 (7%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + TEE L EHFSKYGEI + T+ D TGRSRGF F+ FKD S+ D + +
Sbjct: 149 GLDWQTTEEKLVEHFSKYGEIVDYTIMKDNATGRSRGFGFLTFKDPASV------DALLK 202
Query: 166 GNHVINNKKIEAKKA-----KAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDK 220
H+++ K I+ K+A + K GKIF+GG+ P + ++E F+QFG II+ ++ DK
Sbjct: 203 DRHILDGKLIDPKRAISKEDQEKVGKIFIGGIDPMVTEQEFDEFFSQFGKIIDCQLMIDK 262
Query: 221 SKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ + F FIT++ + V + N + K ++VK+A P+
Sbjct: 263 DTGRSRGFGFITYDSPAAVDRVCVNKYLTLKGKAMEVKRAAPR 305
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/42 (59%), Positives = 31/42 (73%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLE 649
E+L EHFSKYGEI + T+ D TGRSRGF F+ FKD S++
Sbjct: 157 EKLVEHFSKYGEIVDYTIMKDNATGRSRGFGFLTFKDPASVD 198
Score = 45.8 bits (107), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K F+GGL + +E++ HF+++G I++ + D + + + F F+TF+ + V LLK+
Sbjct: 144 KTFLGGLDWQTTEEKLVEHFSKYGEIVDYTIMKDNATGRSRGFGFLTFKDPASVDALLKD 203
Query: 246 PKQKINDKEVDVKKATPK 263
+ ++ K +D K+A K
Sbjct: 204 -RHILDGKLIDPKRAISK 220
Score = 43.5 bits (101), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Query: 601 GIVDKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASV 653
GI +TE E E FS++G+I + L D +TGRSRGF FI + ++++ V
Sbjct: 233 GIDPMVTEQEFDEFFSQFGKIIDCQLMIDKDTGRSRGFGFITYDSPAAVDRVCV 286
>gi|320588554|gb|EFX01022.1| heterogeneous nuclear ribonucleoprotein hrp1 [Grosmannia clavigera
kw1407]
Length = 524
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 64/176 (36%), Positives = 105/176 (59%), Gaps = 7/176 (3%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+ L+++FS++GE+ T+ D TGRSRGF F+ FKD +++ V++ +G +I+ K
Sbjct: 55 QSLRDYFSQFGEVLECTVMRDSATGRSRGFGFLTFKDPKTVNIVMVKEHYLDGK-IIDPK 113
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
+ + + K+ KIFVGG+S E D+E K +FAQFG +++ + DK + + F F+TF
Sbjct: 114 RAIPRDEQEKTSKIFVGGVSQETTDQEFKEYFAQFGRVVDATLMMDKDTGRPRGFGFLTF 173
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKATPK-----PEPFGVRGGRGGRGGRGGRGG 284
E E+ V L + +I+ K ++VKKA P+ + RGG G + +GG GG
Sbjct: 174 ESEAGVEACLST-ELEIHGKAIEVKKAQPRGNLRDDDDASRRGGPGNKFRKGGYGG 228
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GK+F+GGL+ E D+ ++ +F+QFG ++E + D + + + F F+TF+ + ++++
Sbjct: 41 GKMFIGGLNWETTDQSLRDYFSQFGEVLECTVMRDSATGRSRGFGFLTFK-DPKTVNIVM 99
Query: 245 NPKQKINDKEVDVKKATPKPE 265
+ ++ K +D K+A P+ E
Sbjct: 100 VKEHYLDGKIIDPKRAIPRDE 120
Score = 48.5 bits (114), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 34/51 (66%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYF 658
+ L+++FS++GE+ T+ D TGRSRGF F+ FKD +++ V++ Y
Sbjct: 55 QSLRDYFSQFGEVLECTVMRDSATGRSRGFGFLTFKDPKTVNIVMVKEHYL 105
Score = 43.9 bits (102), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 601 GIVDKIT-EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLE 649
G+ + T +E KE+F+++G + + TL D +TGR RGF F+ F+ +E
Sbjct: 131 GVSQETTDQEFKEYFAQFGRVVDATLMMDKDTGRPRGFGFLTFESEAGVE 180
>gi|348508130|ref|XP_003441608.1| PREDICTED: RNA-binding protein Musashi homolog 1-like isoform 1
[Oreochromis niloticus]
Length = 332
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 63/167 (37%), Positives = 100/167 (59%), Gaps = 15/167 (8%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + T+E LKE+F K+GE++ + DP T RSRGF F+ + E+A VE V+A+
Sbjct: 28 GLSWQTTQEGLKEYFCKFGEVKECMVMRDPVTKRSRGFGFVTYA-----EQAGVEKVLAQ 82
Query: 166 GNHVINNKKIEAK---------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEM 216
H +++K I+ K K ++ KIFVGGLS E++K +F QFG + + +
Sbjct: 83 NRHELDSKTIDPKVAFPRRAQPKLVTRTKKIFVGGLSVNTTIEDVKQYFDQFGKVDDAML 142
Query: 217 PYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+DK+ ++ + F F+TFE+E VV + + +IN+K V+ KKA PK
Sbjct: 143 MFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPK 189
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 44/78 (56%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+F+GGLS + E +K +F +FG + E + D + + F F+T+ ++ V +L
Sbjct: 23 KMFIGGLSWQTTQEGLKEYFCKFGEVKECMVMRDPVTKRSRGFGFVTYAEQAGVEKVLAQ 82
Query: 246 PKQKINDKEVDVKKATPK 263
+ +++ K +D K A P+
Sbjct: 83 NRHELDSKTIDPKVAFPR 100
Score = 46.2 bits (108), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 30/48 (62%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVED 655
E LKE+F K+GE++ + DP T RSRGF F+ + + +EK ++
Sbjct: 36 EGLKEYFCKFGEVKECMVMRDPVTKRSRGFGFVTYAEQAGVEKVLAQN 83
Score = 43.9 bits (102), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 38/57 (66%), Gaps = 2/57 (3%)
Query: 603 VDKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFY 659
V+ E++K++F ++G++++ L D T R RGF F+ F++ + +EK V +++F+
Sbjct: 120 VNTTIEDVKQYFDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEK--VCEIHFH 174
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 31/46 (67%)
Query: 452 YDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 497
+DK+ ++ + F F+TFE+E VV + + +IN+K V+ KKA PK
Sbjct: 144 FDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPK 189
>gi|190347776|gb|EDK40115.2| hypothetical protein PGUG_04213 [Meyerozyma guilliermondii ATCC
6260]
Length = 306
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 63/163 (38%), Positives = 99/163 (60%), Gaps = 12/163 (7%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ TE+ L E+FSK+GE+ + T+ D TG+SRGF F+ FKDT+S+ D + +
Sbjct: 5 GLNWDTTEQGLVEYFSKFGEVVDHTIMRDSATGKSRGFGFLTFKDTKSV------DAVIQ 58
Query: 166 GNHVINNKKIEAKKAKA-----KSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDK 220
G+HV++ K I+ K+A A K GKIFVGG+ P + ++E F+QFG+II+ ++ DK
Sbjct: 59 GDHVLDGKLIDPKRAIAREEQDKVGKIFVGGIDPMVNEKEFHDFFSQFGSIIDAQLMIDK 118
Query: 221 SKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ + F FITF+ V + N + K ++VK+A P+
Sbjct: 119 DTGRSRGFGFITFDSPEAVDRVTVNKFLTLKGKSMEVKRAEPR 161
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 33/46 (71%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLE 649
D + L E+FSK+GE+ + T+ D TG+SRGF F+ FKDT+S++
Sbjct: 9 DTTEQGLVEYFSKFGEVVDHTIMRDSATGKSRGFGFLTFKDTKSVD 54
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Query: 601 GIVDKITEELKEH--FSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASV 653
G +D + E + H FS++G I + L D +TGRSRGF FI F E++++ +V
Sbjct: 88 GGIDPMVNEKEFHDFFSQFGSIIDAQLMIDKDTGRSRGFGFITFDSPEAVDRVTV 142
>gi|410920299|ref|XP_003973621.1| PREDICTED: RNA-binding protein Musashi homolog 1-like isoform 2
[Takifugu rubripes]
Length = 350
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 63/167 (37%), Positives = 100/167 (59%), Gaps = 15/167 (8%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + T+E LKE+F K+GE++ + DP T RSRGF F+ + D +A VE V+A+
Sbjct: 28 GLSWQTTQEGLKEYFCKFGEVKECMVMRDPVTKRSRGFGFVTYTD-----QAGVEKVLAQ 82
Query: 166 GNHVINNKKIEAK---------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEM 216
H +++K I+ K K ++ KIFVGGLS E++K +F QFG + + +
Sbjct: 83 NRHELDSKTIDPKVAFPRRAQPKLVTRTKKIFVGGLSVNTTIEDVKHYFDQFGKVDDAML 142
Query: 217 PYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+DK+ ++ + F F+TFE+E VV + + +IN+K V+ KKA PK
Sbjct: 143 MFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPK 189
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 44/78 (56%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+F+GGLS + E +K +F +FG + E + D + + F F+T+ ++ V +L
Sbjct: 23 KMFIGGLSWQTTQEGLKEYFCKFGEVKECMVMRDPVTKRSRGFGFVTYTDQAGVEKVLAQ 82
Query: 246 PKQKINDKEVDVKKATPK 263
+ +++ K +D K A P+
Sbjct: 83 NRHELDSKTIDPKVAFPR 100
Score = 47.8 bits (112), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 30/48 (62%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVED 655
E LKE+F K+GE++ + DP T RSRGF F+ + D +EK ++
Sbjct: 36 EGLKEYFCKFGEVKECMVMRDPVTKRSRGFGFVTYTDQAGVEKVLAQN 83
Score = 43.1 bits (100), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 37/57 (64%), Gaps = 2/57 (3%)
Query: 603 VDKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFY 659
V+ E++K +F ++G++++ L D T R RGF F+ F++ + +EK V +++F+
Sbjct: 120 VNTTIEDVKHYFDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEK--VCEIHFH 174
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 31/46 (67%)
Query: 452 YDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 497
+DK+ ++ + F F+TFE+E VV + + +IN+K V+ KKA PK
Sbjct: 144 FDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPK 189
>gi|410920297|ref|XP_003973620.1| PREDICTED: RNA-binding protein Musashi homolog 1-like isoform 1
[Takifugu rubripes]
Length = 331
Score = 112 bits (279), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 63/167 (37%), Positives = 100/167 (59%), Gaps = 15/167 (8%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + T+E LKE+F K+GE++ + DP T RSRGF F+ + D +A VE V+A+
Sbjct: 28 GLSWQTTQEGLKEYFCKFGEVKECMVMRDPVTKRSRGFGFVTYTD-----QAGVEKVLAQ 82
Query: 166 GNHVINNKKIEAK---------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEM 216
H +++K I+ K K ++ KIFVGGLS E++K +F QFG + + +
Sbjct: 83 NRHELDSKTIDPKVAFPRRAQPKLVTRTKKIFVGGLSVNTTIEDVKHYFDQFGKVDDAML 142
Query: 217 PYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+DK+ ++ + F F+TFE+E VV + + +IN+K V+ KKA PK
Sbjct: 143 MFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPK 189
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 44/78 (56%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+F+GGLS + E +K +F +FG + E + D + + F F+T+ ++ V +L
Sbjct: 23 KMFIGGLSWQTTQEGLKEYFCKFGEVKECMVMRDPVTKRSRGFGFVTYTDQAGVEKVLAQ 82
Query: 246 PKQKINDKEVDVKKATPK 263
+ +++ K +D K A P+
Sbjct: 83 NRHELDSKTIDPKVAFPR 100
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 30/48 (62%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVED 655
E LKE+F K+GE++ + DP T RSRGF F+ + D +EK ++
Sbjct: 36 EGLKEYFCKFGEVKECMVMRDPVTKRSRGFGFVTYTDQAGVEKVLAQN 83
Score = 43.1 bits (100), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 37/57 (64%), Gaps = 2/57 (3%)
Query: 603 VDKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFY 659
V+ E++K +F ++G++++ L D T R RGF F+ F++ + +EK V +++F+
Sbjct: 120 VNTTIEDVKHYFDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEK--VCEIHFH 174
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 31/46 (67%)
Query: 452 YDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 497
+DK+ ++ + F F+TFE+E VV + + +IN+K V+ KKA PK
Sbjct: 144 FDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPK 189
>gi|317419099|emb|CBN81137.1| RNA-binding protein Musashi homolog 1 [Dicentrarchus labrax]
Length = 362
Score = 112 bits (279), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 72/202 (35%), Positives = 111/202 (54%), Gaps = 17/202 (8%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + T+E LKE+F K+GE++ + DP T RSRGF F+ + E+A VE V+A+
Sbjct: 28 GLSWQTTQEGLKEYFCKFGEVKECMVMRDPVTKRSRGFGFVTYA-----EQAGVEKVLAQ 82
Query: 166 GNHVINNKKIEAK---------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEM 216
H +++K I+ K K ++ KIFVGGLS E++K +F QFG + + +
Sbjct: 83 NRHELDSKTIDPKVAFPRRAQPKLVTRTKKIFVGGLSVNTTIEDVKHYFDQFGKVDDAML 142
Query: 217 PYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKP--EPFGVRGGRG 274
+DK+ ++ + F F+TFE+E VV + + +IN+K V+ KKA PK P G GR
Sbjct: 143 MFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMTPTGSARGRS 202
Query: 275 GRGGRGGRGGRMAGGYGGYGGY 296
G + G GY G+
Sbjct: 203 RVMPYGMDAFMLGIGMLGYPGF 224
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 44/78 (56%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+F+GGLS + E +K +F +FG + E + D + + F F+T+ ++ V +L
Sbjct: 23 KMFIGGLSWQTTQEGLKEYFCKFGEVKECMVMRDPVTKRSRGFGFVTYAEQAGVEKVLAQ 82
Query: 246 PKQKINDKEVDVKKATPK 263
+ +++ K +D K A P+
Sbjct: 83 NRHELDSKTIDPKVAFPR 100
Score = 46.2 bits (108), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 30/48 (62%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVED 655
E LKE+F K+GE++ + DP T RSRGF F+ + + +EK ++
Sbjct: 36 EGLKEYFCKFGEVKECMVMRDPVTKRSRGFGFVTYAEQAGVEKVLAQN 83
Score = 43.1 bits (100), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 37/57 (64%), Gaps = 2/57 (3%)
Query: 603 VDKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFY 659
V+ E++K +F ++G++++ L D T R RGF F+ F++ + +EK V +++F+
Sbjct: 120 VNTTIEDVKHYFDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEK--VCEIHFH 174
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 452 YDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKP--EPFGVRGGRGG 509
+DK+ ++ + F F+TFE+E VV + + +IN+K V+ KKA PK P G GR
Sbjct: 144 FDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMTPTGSARGRSR 203
Query: 510 RGGRGGRGGRMAGGYGGYGGY 530
G + G GY G+
Sbjct: 204 VMPYGMDAFMLGIGMLGYPGF 224
>gi|195591012|ref|XP_002085238.1| GD12423 [Drosophila simulans]
gi|194197247|gb|EDX10823.1| GD12423 [Drosophila simulans]
Length = 351
Score = 112 bits (279), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 63/184 (34%), Positives = 98/184 (53%), Gaps = 14/184 (7%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
E L+++F +YG+I + DP T RSRGF F+ F D S++K V+ +G H ++ K
Sbjct: 43 ESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVDK-----VLTQGTHELDGK 97
Query: 174 KIEAK---------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQ 224
K++ K K ++ KIFVGGLS E++K++F QFG I + + +DK ++
Sbjct: 98 KVDPKVAFPRRAHPKMVTRTKKIFVGGLSAPTTLEDVKSYFEQFGPIEDAMLMFDKQTNR 157
Query: 225 RKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGVRGGRGGRGGRGGRGG 284
+ F F+TF+ E VV + + +IN+K V+ KKA PK + GR G
Sbjct: 158 HRGFGFVTFQSEDVVDKVCEIHFHEINNKMVECKKAQPKEVMLPANLAKTRAAGRSAYAG 217
Query: 285 RMAG 288
G
Sbjct: 218 AAPG 221
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 46/79 (58%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GK+F+GGLS + E ++ +F ++G+I E + D + + + F F+TF + V +L
Sbjct: 29 GKMFIGGLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVDKVLT 88
Query: 245 NPKQKINDKEVDVKKATPK 263
+++ K+VD K A P+
Sbjct: 89 QGTHELDGKKVDPKVAFPR 107
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 28/43 (65%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
E L+++F +YG+I + DP T RSRGF F+ F D S++K
Sbjct: 43 ESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVDK 85
>gi|363741379|ref|XP_415912.3| PREDICTED: RNA-binding protein Musashi homolog 2 [Gallus gallus]
Length = 315
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/165 (39%), Positives = 97/165 (58%), Gaps = 16/165 (9%)
Query: 118 EHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNKKIEA 177
EHFSK+GEI + DP T RSRGF F+ F D S++K V+A+ +H +++K I+
Sbjct: 26 EHFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPGSVDK-----VLAQPHHELDSKTIDP 80
Query: 178 K---------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNF 228
K K ++ KIFVGGLS E++K +F QFG + + + +DK+ ++ + F
Sbjct: 81 KVAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGF 140
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE--PFGVRG 271
F+TFE+E VV + + +IN+K V+ KKA PK P G RG
Sbjct: 141 GFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMFPPGTRG 185
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 59/116 (50%), Gaps = 12/116 (10%)
Query: 75 VSCSHHYYLFDQILRTHFFYIMEAKNKMVSHPGIV-------HKITEELKEHFSKYGEIE 127
V H+ L + + + A+ KMV+ + + + E++K++F ++G++E
Sbjct: 65 VLAQPHHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVE 124
Query: 128 NVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNKKIEAKKAKAK 183
+ L D T R RGF F+ F++ + +EK V H INNK +E KKA+ K
Sbjct: 125 DAMLMFDKTTNRHRGFGFVTFENEDVVEK-----VCEIHFHEINNKMVECKKAQPK 175
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 26/39 (66%)
Query: 612 EHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
EHFSK+GEI + DP T RSRGF F+ F D S++K
Sbjct: 26 EHFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPGSVDK 64
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 52/98 (53%), Gaps = 9/98 (9%)
Query: 569 VSCSHYHYLFDQNLRTHYFYIVEAKNKMVSHPGIV-------DKITEELKEHFSKYGEIE 621
V +H L + + + A+ KMV+ + + + E++K++F ++G++E
Sbjct: 65 VLAQPHHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVE 124
Query: 622 NVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFY 659
+ L D T R RGF F+ F++ + +EK V +++F+
Sbjct: 125 DAMLMFDKTTNRHRGFGFVTFENEDVVEK--VCEIHFH 160
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 35/56 (62%), Gaps = 2/56 (3%)
Query: 452 YDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE--PFGVRG 505
+DK+ ++ + F F+TFE+E VV + + +IN+K V+ KKA PK P G RG
Sbjct: 130 FDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMFPPGTRG 185
>gi|449477049|ref|XP_002196403.2| PREDICTED: RNA-binding protein Musashi homolog 1 [Taeniopygia
guttata]
Length = 330
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/167 (36%), Positives = 100/167 (59%), Gaps = 15/167 (8%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + T+E L+E+FS++GE++ + DP T RSRGF F+ F D +A V+ V+A+
Sbjct: 5 GLSWQTTQEGLREYFSQFGEVKECLVMRDPLTKRSRGFGFVTFMD-----QAGVDKVLAQ 59
Query: 166 GNHVINNKKIEAK---------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEM 216
H +++K I+ K K ++ KIFVGGLS E++K +F QFG + + +
Sbjct: 60 SRHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDAML 119
Query: 217 PYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+DK+ ++ + F F+TFE E +V + + +IN+K V+ KKA PK
Sbjct: 120 MFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPK 166
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 44/77 (57%)
Query: 187 IFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNP 246
+F+GGLS + E ++ +F+QFG + E + D + + F F+TF ++ V +L
Sbjct: 1 MFIGGLSWQTTQEGLREYFSQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQS 60
Query: 247 KQKINDKEVDVKKATPK 263
+ +++ K +D K A P+
Sbjct: 61 RHELDSKTIDPKVAFPR 77
Score = 46.6 bits (109), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 29/43 (67%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
E L+E+FS++GE++ + DP T RSRGF F+ F D ++K
Sbjct: 13 EGLREYFSQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDK 55
Score = 43.1 bits (100), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 37/57 (64%), Gaps = 2/57 (3%)
Query: 603 VDKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFY 659
V+ E++K++F ++G++++ L D T R RGF F+ F+ + +EK V +++F+
Sbjct: 97 VNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEK--VCEIHFH 151
Score = 40.0 bits (92), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 30/46 (65%)
Query: 452 YDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 497
+DK+ ++ + F F+TFE E +V + + +IN+K V+ KKA PK
Sbjct: 121 FDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPK 166
>gi|161084519|ref|NP_001097631.1| RNA-binding protein 6, isoform B [Drosophila melanogaster]
gi|158028569|gb|ABW08559.1| RNA-binding protein 6, isoform B [Drosophila melanogaster]
Length = 499
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 93/159 (58%), Gaps = 14/159 (8%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
E L+++F +YG+I + DP T RSRGF F+ F D S++K V+ +G H ++ K
Sbjct: 43 ESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVDK-----VLTQGTHELDGK 97
Query: 174 KIEAK---------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQ 224
K++ K K ++ KIFVGGLS E++K++F QFG I + + +DK ++
Sbjct: 98 KVDPKVAFPRRAHPKMVTRTKKIFVGGLSAPTTLEDVKSYFEQFGPIEDAMLMFDKQTNR 157
Query: 225 RKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ F F+TF+ E VV + + +IN+K V+ KKA PK
Sbjct: 158 HRGFGFVTFQSEDVVDKVCEIHFHEINNKMVECKKAQPK 196
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 46/79 (58%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GK+F+GGLS + E ++ +F ++G+I E + D + + + F F+TF + V +L
Sbjct: 29 GKMFIGGLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVDKVLT 88
Query: 245 NPKQKINDKEVDVKKATPK 263
+++ K+VD K A P+
Sbjct: 89 QGTHELDGKKVDPKVAFPR 107
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 28/43 (65%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
E L+++F +YG+I + DP T RSRGF F+ F D S++K
Sbjct: 43 ESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVDK 85
>gi|26341844|dbj|BAC34584.1| unnamed protein product [Mus musculus]
Length = 278
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/169 (37%), Positives = 99/169 (58%), Gaps = 16/169 (9%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+ L+++FSK+GEI + DP T RSRGF F+ F D ASV+ V+ + +H +++K
Sbjct: 31 DSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADP-----ASVDKVLGQPHHELDSK 85
Query: 174 KIEAK---------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQ 224
I+ K K ++ KIFVGGLS E++K +F QFG + + + +DK+ ++
Sbjct: 86 TIDPKVAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNR 145
Query: 225 RKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE--PFGVRG 271
+ F F+TFE+E VV + + +IN+K V+ KKA PK P G RG
Sbjct: 146 HRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMFPPGTRG 194
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 68/133 (51%), Gaps = 19/133 (14%)
Query: 58 SFSENCLLEDSIGKPLTVSCSHHYYLFDQILRTHFFYIMEAKNKMVSHPGIV-------H 110
+F++ ++ +G+P H+ L + + + A+ KMV+ + +
Sbjct: 64 TFADPASVDKVLGQP-------HHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSAN 116
Query: 111 KITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVI 170
+ E++K++F ++G++E+ L D T R RGF F+ F++ + +EK V H I
Sbjct: 117 TVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEK-----VCEIHFHEI 171
Query: 171 NNKKIEAKKAKAK 183
NNK +E KKA+ K
Sbjct: 172 NNKMVECKKAQPK 184
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 49/87 (56%)
Query: 177 AKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHE 236
A ++ GK+F+GGLS + + ++ +F++FG I E + D + + + F F+TF
Sbjct: 9 ANDSQHDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADP 68
Query: 237 SVVIDLLKNPKQKINDKEVDVKKATPK 263
+ V +L P +++ K +D K A P+
Sbjct: 69 ASVDKVLGQPHHELDSKTIDPKVAFPR 95
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
+ L+++FSK+GEI + DP T RSRGF F+ F D S++K
Sbjct: 31 DSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKV 74
Score = 47.4 bits (111), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 61/115 (53%), Gaps = 16/115 (13%)
Query: 552 SFSENCLLEDSIGKPLTVSCSHYHYLFDQNLRTHYFYIVEAKNKMVSHPGIV-------D 604
+F++ ++ +G+P +H L + + + A+ KMV+ + +
Sbjct: 64 TFADPASVDKVLGQP-------HHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSAN 116
Query: 605 KITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFY 659
+ E++K++F ++G++E+ L D T R RGF F+ F++ + +EK V +++F+
Sbjct: 117 TVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEK--VCEIHFH 169
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 35/56 (62%), Gaps = 2/56 (3%)
Query: 452 YDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE--PFGVRG 505
+DK+ ++ + F F+TFE+E VV + + +IN+K V+ KKA PK P G RG
Sbjct: 139 FDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMFPPGTRG 194
>gi|195016128|ref|XP_001984346.1| GH15068 [Drosophila grimshawi]
gi|193897828|gb|EDV96694.1| GH15068 [Drosophila grimshawi]
Length = 379
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 93/159 (58%), Gaps = 14/159 (8%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
E L+++F +YG+I + DP T RSRGF F+ F D S++K V+ +G H ++ K
Sbjct: 53 ESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVDK-----VLTQGTHELDGK 107
Query: 174 KIEAK---------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQ 224
K++ K K ++ KIFVGGLS E++K++F QFG I + + +DK ++
Sbjct: 108 KVDPKVAFPRRAHPKMVTRTKKIFVGGLSAPTTLEDVKSYFEQFGPIEDAMLMFDKQTNR 167
Query: 225 RKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ F F+TF+ E VV + + +IN+K V+ KKA PK
Sbjct: 168 HRGFGFVTFQSEDVVDKVCEIHFHEINNKMVECKKAQPK 206
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 46/79 (58%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GK+F+GGLS + E ++ +F ++G+I E + D + + + F F+TF + V +L
Sbjct: 39 GKMFIGGLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVDKVLT 98
Query: 245 NPKQKINDKEVDVKKATPK 263
+++ K+VD K A P+
Sbjct: 99 QGTHELDGKKVDPKVAFPR 117
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 28/43 (65%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
E L+++F +YG+I + DP T RSRGF F+ F D S++K
Sbjct: 53 ESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVDK 95
>gi|301759651|ref|XP_002915684.1| PREDICTED: RNA-binding protein Musashi homolog 2-like [Ailuropoda
melanoleuca]
Length = 324
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/169 (37%), Positives = 99/169 (58%), Gaps = 16/169 (9%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+ L+++FSK+GEI + DP T RSRGF F+ F D ASV+ V+ + +H +++K
Sbjct: 31 DSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFAD-----PASVDKVLGQPHHELDSK 85
Query: 174 KIEAK---------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQ 224
I+ K K ++ KIFVGGLS E++K +F QFG + + + +DK+ ++
Sbjct: 86 TIDPKVAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNR 145
Query: 225 RKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE--PFGVRG 271
+ F F+TFE+E VV + + +IN+K V+ KKA PK P G RG
Sbjct: 146 HRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMFPPGTRG 194
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 68/133 (51%), Gaps = 19/133 (14%)
Query: 58 SFSENCLLEDSIGKPLTVSCSHHYYLFDQILRTHFFYIMEAKNKMVSHPGIV-------H 110
+F++ ++ +G+P H+ L + + + A+ KMV+ + +
Sbjct: 64 TFADPASVDKVLGQP-------HHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSAN 116
Query: 111 KITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVI 170
+ E++K++F ++G++E+ L D T R RGF F+ F++ + +EK V H I
Sbjct: 117 TVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEK-----VCEIHFHEI 171
Query: 171 NNKKIEAKKAKAK 183
NNK +E KKA+ K
Sbjct: 172 NNKMVECKKAQPK 184
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 47/82 (57%)
Query: 182 AKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVID 241
+ S K+F+GGLS + + ++ +F++FG I E + D + + + F F+TF + V
Sbjct: 14 SPSSKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDK 73
Query: 242 LLKNPKQKINDKEVDVKKATPK 263
+L P +++ K +D K A P+
Sbjct: 74 VLGQPHHELDSKTIDPKVAFPR 95
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 29/43 (67%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+ L+++FSK+GEI + DP T RSRGF F+ F D S++K
Sbjct: 31 DSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDK 73
Score = 47.0 bits (110), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 61/115 (53%), Gaps = 16/115 (13%)
Query: 552 SFSENCLLEDSIGKPLTVSCSHYHYLFDQNLRTHYFYIVEAKNKMVSHPGIV-------D 604
+F++ ++ +G+P +H L + + + A+ KMV+ + +
Sbjct: 64 TFADPASVDKVLGQP-------HHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSAN 116
Query: 605 KITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFY 659
+ E++K++F ++G++E+ L D T R RGF F+ F++ + +EK V +++F+
Sbjct: 117 TVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEK--VCEIHFH 169
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 35/56 (62%), Gaps = 2/56 (3%)
Query: 452 YDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE--PFGVRG 505
+DK+ ++ + F F+TFE+E VV + + +IN+K V+ KKA PK P G RG
Sbjct: 139 FDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMFPPGTRG 194
>gi|296477081|tpg|DAA19196.1| TPA: musashi 2-like [Bos taurus]
Length = 324
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/169 (37%), Positives = 99/169 (58%), Gaps = 16/169 (9%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+ L+++FSK+GEI + DP T RSRGF F+ F D ASV+ V+ + +H +++K
Sbjct: 31 DSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFAD-----PASVDKVLGQPHHELDSK 85
Query: 174 KIEAK---------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQ 224
I+ K K ++ KIFVGGLS E++K +F QFG + + + +DK+ ++
Sbjct: 86 TIDPKVAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNR 145
Query: 225 RKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE--PFGVRG 271
+ F F+TFE+E VV + + +IN+K V+ KKA PK P G RG
Sbjct: 146 HRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMFPPGTRG 194
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 68/133 (51%), Gaps = 19/133 (14%)
Query: 58 SFSENCLLEDSIGKPLTVSCSHHYYLFDQILRTHFFYIMEAKNKMVSHPGIV-------H 110
+F++ ++ +G+P H+ L + + + A+ KMV+ + +
Sbjct: 64 TFADPASVDKVLGQP-------HHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSAN 116
Query: 111 KITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVI 170
+ E++K++F ++G++E+ L D T R RGF F+ F++ + +EK V H I
Sbjct: 117 TVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEK-----VCEIHFHEI 171
Query: 171 NNKKIEAKKAKAK 183
NNK +E KKA+ K
Sbjct: 172 NNKMVECKKAQPK 184
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 47/82 (57%)
Query: 182 AKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVID 241
+ S K+F+GGLS + + ++ +F++FG I E + D + + + F F+TF + V
Sbjct: 14 SPSSKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDK 73
Query: 242 LLKNPKQKINDKEVDVKKATPK 263
+L P +++ K +D K A P+
Sbjct: 74 VLGQPHHELDSKTIDPKVAFPR 95
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 29/43 (67%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+ L+++FSK+GEI + DP T RSRGF F+ F D S++K
Sbjct: 31 DSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDK 73
Score = 47.0 bits (110), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 61/115 (53%), Gaps = 16/115 (13%)
Query: 552 SFSENCLLEDSIGKPLTVSCSHYHYLFDQNLRTHYFYIVEAKNKMVSHPGIV-------D 604
+F++ ++ +G+P +H L + + + A+ KMV+ + +
Sbjct: 64 TFADPASVDKVLGQP-------HHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSAN 116
Query: 605 KITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFY 659
+ E++K++F ++G++E+ L D T R RGF F+ F++ + +EK V +++F+
Sbjct: 117 TVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEK--VCEIHFH 169
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 35/56 (62%), Gaps = 2/56 (3%)
Query: 452 YDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE--PFGVRG 505
+DK+ ++ + F F+TFE+E VV + + +IN+K V+ KKA PK P G RG
Sbjct: 139 FDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMFPPGTRG 194
>gi|392351488|ref|XP_340877.5| PREDICTED: RNA-binding protein Musashi homolog 2-like [Rattus
norvegicus]
Length = 463
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/170 (37%), Positives = 99/170 (58%), Gaps = 16/170 (9%)
Query: 113 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINN 172
+ L+++FSK+GEI + DP T RSRGF F+ F D ASV+ V+ + +H +++
Sbjct: 151 ADSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFAD-----PASVDKVLGQPHHELDS 205
Query: 173 KKIEAK---------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKS 223
K I+ K K ++ KIFVGGLS E++K +F QFG + + + +DK+ +
Sbjct: 206 KTIDPKVAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTN 265
Query: 224 QRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE--PFGVRG 271
+ + F F+TFE+E VV + + +IN+K V+ KKA PK P G RG
Sbjct: 266 RHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMFPPGTRG 315
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 68/133 (51%), Gaps = 19/133 (14%)
Query: 58 SFSENCLLEDSIGKPLTVSCSHHYYLFDQILRTHFFYIMEAKNKMVSHPGIV-------H 110
+F++ ++ +G+P H+ L + + + A+ KMV+ + +
Sbjct: 185 TFADPASVDKVLGQP-------HHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSAN 237
Query: 111 KITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVI 170
+ E++K++F ++G++E+ L D T R RGF F+ F++ + +EK V H I
Sbjct: 238 TVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEK-----VCEIHFHEI 292
Query: 171 NNKKIEAKKAKAK 183
NNK +E KKA+ K
Sbjct: 293 NNKMVECKKAQPK 305
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 30/47 (63%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D + L+++FSK+GEI + DP T RSRGF F+ F D S++K
Sbjct: 148 DVPADSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDK 194
Score = 47.4 bits (111), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 61/115 (53%), Gaps = 16/115 (13%)
Query: 552 SFSENCLLEDSIGKPLTVSCSHYHYLFDQNLRTHYFYIVEAKNKMVSHPGIV-------D 604
+F++ ++ +G+P +H L + + + A+ KMV+ + +
Sbjct: 185 TFADPASVDKVLGQP-------HHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSAN 237
Query: 605 KITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFY 659
+ E++K++F ++G++E+ L D T R RGF F+ F++ + +EK V +++F+
Sbjct: 238 TVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEK--VCEIHFH 290
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 35/56 (62%), Gaps = 2/56 (3%)
Query: 452 YDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE--PFGVRG 505
+DK+ ++ + F F+TFE+E VV + + +IN+K V+ KKA PK P G RG
Sbjct: 260 FDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMFPPGTRG 315
>gi|379056197|dbj|BAL68140.1| RNA-binding protein Musashi homolog 1 Long [Danio rerio]
Length = 349
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/254 (32%), Positives = 127/254 (50%), Gaps = 26/254 (10%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + T+E LK++F K+GE++ + DP T RSRGF F+ F D +A V+ V+A+
Sbjct: 26 GLSWQTTQEGLKDYFCKFGEVKESMVMRDPVTKRSRGFGFVTFVD-----QAGVDKVLAQ 80
Query: 166 GNHVINNKKIEAK---------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEM 216
H +++K I+ K K ++ KIFVGGLS E++K +F QFG + + +
Sbjct: 81 TRHELDSKTIDPKVAFPRRAQPKLVTRTKKIFVGGLSVNTTIEDVKQYFDQFGKVDDAML 140
Query: 217 PYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKP--EPFGVRGGRG 274
+DK+ ++ + F F+TFE+E VV + + +IN+K V+ KKA PK P G GR
Sbjct: 141 MFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMSPTGSSRGRA 200
Query: 275 GRGGRGGRGGRMAGGYGGYGGY-GGGYGGILY---KPLLFYELNELGISGRSLVCRTGPM 330
G + G GY G+ Y G Y P Y+ E + L+ P
Sbjct: 201 RVMPYGMDAFMLGIGMLGYPGFQATTYAGRSYTSLTPGYTYQFPEFHLERTPLLTSPHP- 259
Query: 331 VQATPPLAEVDVTG 344
P L + +T
Sbjct: 260 ----PELTAIPLTA 269
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 45/78 (57%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+F+GGLS + E +K +F +FG + E+ + D + + F F+TF ++ V +L
Sbjct: 21 KMFIGGLSWQTTQEGLKDYFCKFGEVKESMVMRDPVTKRSRGFGFVTFVDQAGVDKVLAQ 80
Query: 246 PKQKINDKEVDVKKATPK 263
+ +++ K +D K A P+
Sbjct: 81 TRHELDSKTIDPKVAFPR 98
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
G+ + T+E LK++F K+GE++ + DP T RSRGF F+ F D ++K
Sbjct: 26 GLSWQTTQEGLKDYFCKFGEVKESMVMRDPVTKRSRGFGFVTFVDQAGVDK 76
Score = 43.5 bits (101), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 38/57 (66%), Gaps = 2/57 (3%)
Query: 603 VDKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFY 659
V+ E++K++F ++G++++ L D T R RGF F+ F++ + +EK V +++F+
Sbjct: 118 VNTTIEDVKQYFDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEK--VCEIHFH 172
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 48/102 (47%), Gaps = 8/102 (7%)
Query: 452 YDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKP--EPFGVRGGRGG 509
+DK+ ++ + F F+TFE+E VV + + +IN+K V+ KKA PK P G GR
Sbjct: 142 FDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMSPTGSSRGRAR 201
Query: 510 RGGRGGRGGRMAGGYGGYGGY------GGGYGELDYLQLWQF 545
G + G GY G+ G Y L +QF
Sbjct: 202 VMPYGMDAFMLGIGMLGYPGFQATTYAGRSYTSLTPGYTYQF 243
>gi|47086453|ref|NP_997961.1| musashi homolog 2a [Danio rerio]
gi|28374420|gb|AAH45335.1| Musashi homolog 2a (Drosophila) [Danio rerio]
gi|182889228|gb|AAI64813.1| Msi2 protein [Danio rerio]
Length = 388
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/169 (37%), Positives = 99/169 (58%), Gaps = 16/169 (9%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+ L+++F K+GEI + DP T RSRGF FI F D S++K V+A+ +H +++K
Sbjct: 35 DSLRDYFCKFGEIRECMVMRDPTTKRSRGFGFITFADVSSVDK-----VLAQPHHELDSK 89
Query: 174 KIEAK---------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQ 224
I+ K K ++ KIFVGGLS E++K +F QFG + + + +DK+ ++
Sbjct: 90 TIDPKVAFPRRAQPKMVTRTKKIFVGGLSASTVVEDVKQYFEQFGKVEDAMLMFDKTTNR 149
Query: 225 RKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE--PFGVRG 271
+ F F+TFE+E +V + + +IN+K V+ KKA PK P G RG
Sbjct: 150 HRGFGFVTFENEDIVEKVCEIHFHEINNKMVECKKAQPKEVMFPPGTRG 198
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GK+F+GGLS + + ++ +F +FG I E + D + + + F FITF S V +L
Sbjct: 21 GKMFIGGLSWQTSPDSLRDYFCKFGEIRECMVMRDPTTKRSRGFGFITFADVSSVDKVLA 80
Query: 245 NPKQKINDKEVDVKKATPK 263
P +++ K +D K A P+
Sbjct: 81 QPHHELDSKTIDPKVAFPR 99
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 44/72 (61%), Gaps = 5/72 (6%)
Query: 112 ITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVIN 171
+ E++K++F ++G++E+ L D T R RGF F+ F++ + +EK V H IN
Sbjct: 122 VVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDIVEK-----VCEIHFHEIN 176
Query: 172 NKKIEAKKAKAK 183
NK +E KKA+ K
Sbjct: 177 NKMVECKKAQPK 188
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 28/43 (65%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+ L+++F K+GEI + DP T RSRGF FI F D S++K
Sbjct: 35 DSLRDYFCKFGEIRECMVMRDPTTKRSRGFGFITFADVSSVDK 77
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 37/54 (68%), Gaps = 2/54 (3%)
Query: 606 ITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFY 659
+ E++K++F ++G++E+ L D T R RGF F+ F++ + +EK V +++F+
Sbjct: 122 VVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDIVEK--VCEIHFH 173
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 35/56 (62%), Gaps = 2/56 (3%)
Query: 452 YDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE--PFGVRG 505
+DK+ ++ + F F+TFE+E +V + + +IN+K V+ KKA PK P G RG
Sbjct: 143 FDKTTNRHRGFGFVTFENEDIVEKVCEIHFHEINNKMVECKKAQPKEVMFPPGTRG 198
>gi|354472023|ref|XP_003498240.1| PREDICTED: RNA-binding protein Musashi homolog 2-like [Cricetulus
griseus]
Length = 343
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/169 (37%), Positives = 99/169 (58%), Gaps = 16/169 (9%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+ L+++FSK+GEI + DP T RSRGF F+ F D ASV+ V+ + +H +++K
Sbjct: 31 DSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFAD-----PASVDKVLGQPHHELDSK 85
Query: 174 KIEAK---------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQ 224
I+ K K ++ KIFVGGLS E++K +F QFG + + + +DK+ ++
Sbjct: 86 TIDPKVAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNR 145
Query: 225 RKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE--PFGVRG 271
+ F F+TFE+E VV + + +IN+K V+ KKA PK P G RG
Sbjct: 146 HRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMFPPGTRG 194
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 68/133 (51%), Gaps = 19/133 (14%)
Query: 58 SFSENCLLEDSIGKPLTVSCSHHYYLFDQILRTHFFYIMEAKNKMVSHPGIV-------H 110
+F++ ++ +G+P H+ L + + + A+ KMV+ + +
Sbjct: 64 TFADPASVDKVLGQP-------HHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSAN 116
Query: 111 KITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVI 170
+ E++K++F ++G++E+ L D T R RGF F+ F++ + +EK V H I
Sbjct: 117 TVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEK-----VCEIHFHEI 171
Query: 171 NNKKIEAKKAKAK 183
NNK +E KKA+ K
Sbjct: 172 NNKMVECKKAQPK 184
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 47/82 (57%)
Query: 182 AKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVID 241
+ S K+F+GGLS + + ++ +F++FG I E + D + + + F F+TF + V
Sbjct: 14 SPSSKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDK 73
Query: 242 LLKNPKQKINDKEVDVKKATPK 263
+L P +++ K +D K A P+
Sbjct: 74 VLGQPHHELDSKTIDPKVAFPR 95
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 29/43 (67%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+ L+++FSK+GEI + DP T RSRGF F+ F D S++K
Sbjct: 31 DSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDK 73
Score = 47.4 bits (111), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 61/115 (53%), Gaps = 16/115 (13%)
Query: 552 SFSENCLLEDSIGKPLTVSCSHYHYLFDQNLRTHYFYIVEAKNKMVSHPGIV-------D 604
+F++ ++ +G+P +H L + + + A+ KMV+ + +
Sbjct: 64 TFADPASVDKVLGQP-------HHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSAN 116
Query: 605 KITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFY 659
+ E++K++F ++G++E+ L D T R RGF F+ F++ + +EK V +++F+
Sbjct: 117 TVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEK--VCEIHFH 169
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 35/56 (62%), Gaps = 2/56 (3%)
Query: 452 YDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE--PFGVRG 505
+DK+ ++ + F F+TFE+E VV + + +IN+K V+ KKA PK P G RG
Sbjct: 139 FDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMFPPGTRG 194
>gi|223646910|gb|ACN10213.1| Heterogeneous nuclear ribonucleoprotein A/B [Salmo salar]
gi|223672773|gb|ACN12568.1| Heterogeneous nuclear ribonucleoprotein A/B [Salmo salar]
Length = 336
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/161 (40%), Positives = 96/161 (59%), Gaps = 17/161 (10%)
Query: 115 ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNKK 174
+LK++FSK+GE+ + T+K D NTGRSRGF FI+FK E SV+ V+ + H ++ ++
Sbjct: 97 DLKDYFSKFGEVTDCTIKMDSNTGRSRGFGFILFK-----EAGSVDKVLEQKEHRLDGRQ 151
Query: 175 IEAKKA----KAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCF 230
I+ KKA K + KIFVGGL+PE +E I+ +F FG I E+P D +R+ F F
Sbjct: 152 IDPKKAMAMKKEPAKKIFVGGLNPEATEETIREYFGTFGEIESIELPVDPKFKKRRGFIF 211
Query: 231 ITFEHESVVIDLLKNPKQKI------NDKE--VDVKKATPK 263
ITF+ E+ V L+ + N KE ++K A PK
Sbjct: 212 ITFKEEATVKKCLEKKFHNVCGTKVTNGKEGLCEIKIAQPK 252
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 64/113 (56%), Gaps = 2/113 (1%)
Query: 155 EKASVEDVIAEGNHVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIET 214
E A VE+ + + N +I A K + +GK+FVGGLS + +++K +F++FG + +
Sbjct: 53 EPAVVEEGVTQ-NGAAEGGQINASKGEDDAGKMFVGGLSWDTSKKDLKDYFSKFGEVTDC 111
Query: 215 EMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATP-KPEP 266
+ D + + + F FI F+ V +L+ + +++ +++D KKA K EP
Sbjct: 112 TIKMDSNTGRSRGFGFILFKEAGSVDKVLEQKEHRLDGRQIDPKKAMAMKKEP 164
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 37/47 (78%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D ++LK++FSK+GE+ + T+K D NTGRSRGF FI+FK+ S++K
Sbjct: 92 DTSKKDLKDYFSKFGEVTDCTIKMDSNTGRSRGFGFILFKEAGSVDK 138
Score = 43.1 bits (100), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
G+ + TEE ++E+F +GEIE++ L DP + RGF FI FK+ +++K
Sbjct: 172 GLNPEATEETIREYFGTFGEIESIELPVDPKFKKRRGFIFITFKEEATVKKC 223
>gi|119614918|gb|EAW94512.1| musashi homolog 2 (Drosophila), isoform CRA_g [Homo sapiens]
Length = 255
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/206 (36%), Positives = 111/206 (53%), Gaps = 23/206 (11%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+ L+++FSK+GEI + DP T RSRGF F+ F D ASV+ V+ + +H +++K
Sbjct: 35 DSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFAD-----PASVDKVLGQPHHELDSK 89
Query: 174 KIEAK---------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQ 224
I+ K K ++ KIFVGGLS E++K +F QFG + + + +DK+ ++
Sbjct: 90 TIDPKVAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNR 149
Query: 225 RKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE--PFGVRGGRGGRGGRGGR 282
+ F F+TFE+E VV + + +IN+K V+ KKA PK P G RG RG
Sbjct: 150 HRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMFPPGTRG--RARGLPYTM 207
Query: 283 GGRMAG-GYGGY----GGYGGGYGGI 303
M G G GY YG GY G
Sbjct: 208 DAFMLGMGMLGYPNFVATYGRGYPGF 233
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 68/133 (51%), Gaps = 19/133 (14%)
Query: 58 SFSENCLLEDSIGKPLTVSCSHHYYLFDQILRTHFFYIMEAKNKMVSHPGIV-------H 110
+F++ ++ +G+P H+ L + + + A+ KMV+ + +
Sbjct: 68 TFADPASVDKVLGQP-------HHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSAN 120
Query: 111 KITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVI 170
+ E++K++F ++G++E+ L D T R RGF F+ F++ + +EK V H I
Sbjct: 121 TVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEK-----VCEIHFHEI 175
Query: 171 NNKKIEAKKAKAK 183
NNK +E KKA+ K
Sbjct: 176 NNKMVECKKAQPK 188
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 49/87 (56%)
Query: 177 AKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHE 236
A ++ GK+F+GGLS + + ++ +F++FG I E + D + + + F F+TF
Sbjct: 13 ANDSQHDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADP 72
Query: 237 SVVIDLLKNPKQKINDKEVDVKKATPK 263
+ V +L P +++ K +D K A P+
Sbjct: 73 ASVDKVLGQPHHELDSKTIDPKVAFPR 99
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
+ L+++FSK+GEI + DP T RSRGF F+ F D S++K
Sbjct: 35 DSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKV 78
Score = 46.6 bits (109), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 61/115 (53%), Gaps = 16/115 (13%)
Query: 552 SFSENCLLEDSIGKPLTVSCSHYHYLFDQNLRTHYFYIVEAKNKMVSHPGIV-------D 604
+F++ ++ +G+P +H L + + + A+ KMV+ + +
Sbjct: 68 TFADPASVDKVLGQP-------HHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSAN 120
Query: 605 KITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFY 659
+ E++K++F ++G++E+ L D T R RGF F+ F++ + +EK V +++F+
Sbjct: 121 TVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEK--VCEIHFH 173
Score = 42.0 bits (97), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 54/113 (47%), Gaps = 19/113 (16%)
Query: 452 YDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE--PFGVRGGRGG 509
+DK+ ++ + F F+TFE+E VV + + +IN+K V+ KKA PK P G RG G
Sbjct: 143 FDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMFPPGTRGRARG 202
Query: 510 RG--------GRGGRG-GRMAGGYG-GYGGYGGGYGELDYLQLWQFFDWISSS 552
G G G YG GY G+ YG +QF D++ S
Sbjct: 203 LPYTMDAFMLGMGMLGYPNFVATYGRGYPGFAPSYG-------YQFPDYLPVS 248
>gi|209154614|gb|ACI33539.1| Heterogeneous nuclear ribonucleoprotein A/B [Salmo salar]
Length = 359
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/134 (44%), Positives = 86/134 (64%), Gaps = 9/134 (6%)
Query: 115 ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNKK 174
+LK++FSK+GE+ + T+K D NTGRSRGF FI+F+ ASV+ V+ + H ++ ++
Sbjct: 88 DLKDYFSKFGEVTDCTIKMDSNTGRSRGFGFILFQTA-----ASVDKVLEQKEHRLDGRQ 142
Query: 175 IEAKKA----KAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCF 230
I+ KKA K + KIFVGGL+PE +E I+ +F FG I E+P D +R+ F F
Sbjct: 143 IDPKKAMAMKKEPAKKIFVGGLNPEATEETIREYFGTFGEIESIELPVDPKFKKRRGFIF 202
Query: 231 ITFEHESVVIDLLK 244
ITF+ ES V L+
Sbjct: 203 ITFKEESTVKKCLE 216
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 58/101 (57%), Gaps = 1/101 (0%)
Query: 167 NHVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRK 226
N +I A K + +GK+FVGGLS + +++K +F++FG + + + D + + +
Sbjct: 55 NGAAEGGQINASKGEDDAGKMFVGGLSWDTSKKDLKDYFSKFGEVTDCTIKMDSNTGRSR 114
Query: 227 NFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATP-KPEP 266
F FI F+ + V +L+ + +++ +++D KKA K EP
Sbjct: 115 GFGFILFQTAASVDKVLEQKEHRLDGRQIDPKKAMAMKKEP 155
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 36/47 (76%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D ++LK++FSK+GE+ + T+K D NTGRSRGF FI+F+ S++K
Sbjct: 83 DTSKKDLKDYFSKFGEVTDCTIKMDSNTGRSRGFGFILFQTAASVDK 129
Score = 43.5 bits (101), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
G+ + TEE ++E+F +GEIE++ L DP + RGF FI FK+ +++K
Sbjct: 163 GLNPEATEETIREYFGTFGEIESIELPVDPKFKKRRGFIFITFKEESTVKKC 214
>gi|220942596|gb|ACL83841.1| msi-PA [synthetic construct]
Length = 607
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/159 (39%), Positives = 95/159 (59%), Gaps = 13/159 (8%)
Query: 113 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINN 172
+++LKE+F+ +G + +V + DP T RSRGF FI F+ E +VE V+ H ++
Sbjct: 188 SDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQ-----EPCTVEKVLKVPIHTLDG 242
Query: 173 KKIEAKKAKAK--------SGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQ 224
KKI+ K A K + KIFVGG+S + EE+KA+F+QFG + ET M D+ +
Sbjct: 243 KKIDPKHATPKNRPRQANKTKKIFVGGVSQDTSAEEVKAYFSQFGPVEETVMLMDQQTKR 302
Query: 225 RKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ F F+TFE+E VV + + I +K+V+ KKA PK
Sbjct: 303 HRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPK 341
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 47/82 (57%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GK+FVGGLS + +++K +F FG + + + D + + F FITF+ V +LK
Sbjct: 175 GKLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVEKVLK 234
Query: 245 NPKQKINDKEVDVKKATPKPEP 266
P ++ K++D K ATPK P
Sbjct: 235 VPIHTLDGKKIDPKHATPKNRP 256
Score = 46.6 bits (109), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 32/44 (72%)
Query: 607 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+++LKE+F+ +G + +V + DP T RSRGF FI F++ ++EK
Sbjct: 188 SDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVEK 231
Score = 43.9 bits (102), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFYS 660
D EE+K +FS++G +E + D T R RGF F+ F++ + +++ V +++F++
Sbjct: 273 DTSAEEVKAYFSQFGPVEETVMLMDQQTKRHRGFGFVTFENEDVVDR--VCEIHFHT 327
>gi|269914213|gb|ACZ52626.1| MIP15164p [Drosophila melanogaster]
Length = 578
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/159 (39%), Positives = 95/159 (59%), Gaps = 13/159 (8%)
Query: 113 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINN 172
+++LKE+F+ +G + +V + DP T RSRGF FI F+ E +VE V+ H ++
Sbjct: 160 SDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQ-----EPCTVEKVLKVPIHTLDG 214
Query: 173 KKIEAKKAKAK--------SGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQ 224
KKI+ K A K + KIFVGG+S + EE+KA+F+QFG + ET M D+ +
Sbjct: 215 KKIDPKHATPKNRPRQANKTKKIFVGGVSQDTSAEEVKAYFSQFGPVEETVMLMDQQTKR 274
Query: 225 RKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ F F+TFE+E VV + + I +K+V+ KKA PK
Sbjct: 275 HRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPK 313
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 47/82 (57%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GK+FVGGLS + +++K +F FG + + + D + + F FITF+ V +LK
Sbjct: 147 GKLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVEKVLK 206
Query: 245 NPKQKINDKEVDVKKATPKPEP 266
P ++ K++D K ATPK P
Sbjct: 207 VPIHTLDGKKIDPKHATPKNRP 228
Score = 47.0 bits (110), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 32/44 (72%)
Query: 607 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+++LKE+F+ +G + +V + DP T RSRGF FI F++ ++EK
Sbjct: 160 SDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVEK 203
Score = 43.9 bits (102), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFYS 660
D EE+K +FS++G +E + D T R RGF F+ F++ + +++ V +++F++
Sbjct: 245 DTSAEEVKAYFSQFGPVEETVMLMDQQTKRHRGFGFVTFENEDVVDR--VCEIHFHT 299
>gi|442633006|ref|NP_001261979.1| RNA-binding protein 6, isoform G [Drosophila melanogaster]
gi|440215929|gb|AGB94672.1| RNA-binding protein 6, isoform G [Drosophila melanogaster]
Length = 371
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 93/159 (58%), Gaps = 14/159 (8%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
E L+++F +YG+I + DP T RSRGF F+ F D S++K V+ +G H ++ K
Sbjct: 43 ESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVDK-----VLTQGTHELDGK 97
Query: 174 KIEAK---------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQ 224
K++ K K ++ KIFVGGLS E++K++F QFG I + + +DK ++
Sbjct: 98 KVDPKVAFPRRAHPKMVTRTKKIFVGGLSAPTTLEDVKSYFEQFGPIEDAMLMFDKQTNR 157
Query: 225 RKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ F F+TF+ E VV + + +IN+K V+ KKA PK
Sbjct: 158 HRGFGFVTFQSEDVVDKVCEIHFHEINNKMVECKKAQPK 196
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 46/79 (58%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GK+F+GGLS + E ++ +F ++G+I E + D + + + F F+TF + V +L
Sbjct: 29 GKMFIGGLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVDKVLT 88
Query: 245 NPKQKINDKEVDVKKATPK 263
+++ K+VD K A P+
Sbjct: 89 QGTHELDGKKVDPKVAFPR 107
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 28/43 (65%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
E L+++F +YG+I + DP T RSRGF F+ F D S++K
Sbjct: 43 ESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVDK 85
>gi|62484464|ref|NP_730245.2| RNA-binding protein 6, isoform A [Drosophila melanogaster]
gi|194872120|ref|XP_001972967.1| GG15829 [Drosophila erecta]
gi|195328324|ref|XP_002030866.1| GM24349 [Drosophila sechellia]
gi|195494905|ref|XP_002095039.1| GE22169 [Drosophila yakuba]
gi|75027590|sp|Q9VVE5.3|MSIR6_DROME RecName: Full=RNA-binding protein Musashi homolog Rbp6
gi|21483526|gb|AAM52738.1| RE25373p [Drosophila melanogaster]
gi|61678495|gb|AAF49366.3| RNA-binding protein 6, isoform A [Drosophila melanogaster]
gi|190654750|gb|EDV51993.1| GG15829 [Drosophila erecta]
gi|194119809|gb|EDW41852.1| GM24349 [Drosophila sechellia]
gi|194181140|gb|EDW94751.1| GE22169 [Drosophila yakuba]
Length = 369
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 93/159 (58%), Gaps = 14/159 (8%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
E L+++F +YG+I + DP T RSRGF F+ F D S++K V+ +G H ++ K
Sbjct: 43 ESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVDK-----VLTQGTHELDGK 97
Query: 174 KIEAK---------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQ 224
K++ K K ++ KIFVGGLS E++K++F QFG I + + +DK ++
Sbjct: 98 KVDPKVAFPRRAHPKMVTRTKKIFVGGLSAPTTLEDVKSYFEQFGPIEDAMLMFDKQTNR 157
Query: 225 RKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ F F+TF+ E VV + + +IN+K V+ KKA PK
Sbjct: 158 HRGFGFVTFQSEDVVDKVCEIHFHEINNKMVECKKAQPK 196
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 46/79 (58%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GK+F+GGLS + E ++ +F ++G+I E + D + + + F F+TF + V +L
Sbjct: 29 GKMFIGGLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVDKVLT 88
Query: 245 NPKQKINDKEVDVKKATPK 263
+++ K+VD K A P+
Sbjct: 89 QGTHELDGKKVDPKVAFPR 107
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 28/43 (65%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
E L+++F +YG+I + DP T RSRGF F+ F D S++K
Sbjct: 43 ESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVDK 85
Score = 38.9 bits (89), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 43/107 (40%), Gaps = 20/107 (18%)
Query: 452 YDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGVRGGRGGRG 511
+DK ++ + F F+TF+ E VV + + +IN+K V+ KKA PK +
Sbjct: 151 FDKQTNRHRGFGFVTFQSEDVVDKVCEIHFHEINNKMVECKKAQPKEVMLPANLAKTRAA 210
Query: 512 GRGGRGGRMAG--------------------GYGGYGGYGGGYGELD 538
GR M G GY GY +G Y +D
Sbjct: 211 GRSAYDNIMWGLGTLPEGFPAAAYAAYAAGRGYSGYPSFGLPYPTVD 257
>gi|397493092|ref|XP_003817447.1| PREDICTED: RNA-binding protein Musashi homolog 2 [Pan paniscus]
gi|403279708|ref|XP_003931388.1| PREDICTED: RNA-binding protein Musashi homolog 2 [Saimiri
boliviensis boliviensis]
gi|194379116|dbj|BAG58109.1| unnamed protein product [Homo sapiens]
Length = 324
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/169 (37%), Positives = 99/169 (58%), Gaps = 16/169 (9%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+ L+++FSK+GEI + DP T RSRGF F+ F D ASV+ V+ + +H +++K
Sbjct: 13 DSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFAD-----PASVDKVLGQPHHELDSK 67
Query: 174 KIEAK---------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQ 224
I+ K K ++ KIFVGGLS E++K +F QFG + + + +DK+ ++
Sbjct: 68 TIDPKVAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNR 127
Query: 225 RKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE--PFGVRG 271
+ F F+TFE+E VV + + +IN+K V+ KKA PK P G RG
Sbjct: 128 HRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMFPPGTRG 176
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 68/133 (51%), Gaps = 19/133 (14%)
Query: 58 SFSENCLLEDSIGKPLTVSCSHHYYLFDQILRTHFFYIMEAKNKMVSHPGIV-------H 110
+F++ ++ +G+P H+ L + + + A+ KMV+ + +
Sbjct: 46 TFADPASVDKVLGQP-------HHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSAN 98
Query: 111 KITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVI 170
+ E++K++F ++G++E+ L D T R RGF F+ F++ + +EK V H I
Sbjct: 99 TVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEK-----VCEIHFHEI 153
Query: 171 NNKKIEAKKAKAK 183
NNK +E KKA+ K
Sbjct: 154 NNKMVECKKAQPK 166
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 44/77 (57%)
Query: 187 IFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNP 246
+F+GGLS + + ++ +F++FG I E + D + + + F F+TF + V +L P
Sbjct: 1 MFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQP 60
Query: 247 KQKINDKEVDVKKATPK 263
+++ K +D K A P+
Sbjct: 61 HHELDSKTIDPKVAFPR 77
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 29/43 (67%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+ L+++FSK+GEI + DP T RSRGF F+ F D S++K
Sbjct: 13 DSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDK 55
Score = 47.4 bits (111), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 61/115 (53%), Gaps = 16/115 (13%)
Query: 552 SFSENCLLEDSIGKPLTVSCSHYHYLFDQNLRTHYFYIVEAKNKMVSHPGIV-------D 604
+F++ ++ +G+P +H L + + + A+ KMV+ + +
Sbjct: 46 TFADPASVDKVLGQP-------HHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSAN 98
Query: 605 KITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFY 659
+ E++K++F ++G++E+ L D T R RGF F+ F++ + +EK V +++F+
Sbjct: 99 TVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEK--VCEIHFH 151
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 35/56 (62%), Gaps = 2/56 (3%)
Query: 452 YDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE--PFGVRG 505
+DK+ ++ + F F+TFE+E VV + + +IN+K V+ KKA PK P G RG
Sbjct: 121 FDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMFPPGTRG 176
>gi|17864096|ref|NP_524577.1| musashi, isoform A [Drosophila melanogaster]
gi|541667|emb|CAA55897.1| musashi [Drosophila melanogaster]
gi|15291915|gb|AAK93226.1| LD31631p [Drosophila melanogaster]
gi|23172305|gb|AAF56478.2| musashi, isoform A [Drosophila melanogaster]
Length = 606
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/159 (39%), Positives = 95/159 (59%), Gaps = 13/159 (8%)
Query: 113 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINN 172
+++LKE+F+ +G + +V + DP T RSRGF FI F+ E +VE V+ H ++
Sbjct: 188 SDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQ-----EPCTVEKVLKVPIHTLDG 242
Query: 173 KKIEAKKAKAK--------SGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQ 224
KKI+ K A K + KIFVGG+S + EE+KA+F+QFG + ET M D+ +
Sbjct: 243 KKIDPKHATPKNRPRQANKTKKIFVGGVSQDTSAEEVKAYFSQFGPVEETVMLMDQQTKR 302
Query: 225 RKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ F F+TFE+E VV + + I +K+V+ KKA PK
Sbjct: 303 HRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPK 341
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 47/82 (57%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GK+FVGGLS + +++K +F FG + + + D + + F FITF+ V +LK
Sbjct: 175 GKLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVEKVLK 234
Query: 245 NPKQKINDKEVDVKKATPKPEP 266
P ++ K++D K ATPK P
Sbjct: 235 VPIHTLDGKKIDPKHATPKNRP 256
Score = 46.6 bits (109), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 32/44 (72%)
Query: 607 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+++LKE+F+ +G + +V + DP T RSRGF FI F++ ++EK
Sbjct: 188 SDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVEK 231
Score = 43.9 bits (102), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFYS 660
D EE+K +FS++G +E + D T R RGF F+ F++ + +++ V +++F++
Sbjct: 273 DTSAEEVKAYFSQFGPVEETVMLMDQQTKRHRGFGFVTFENEDVVDR--VCEIHFHT 327
>gi|355568556|gb|EHH24837.1| hypothetical protein EGK_08563, partial [Macaca mulatta]
gi|355754027|gb|EHH57992.1| hypothetical protein EGM_07749, partial [Macaca fascicularis]
Length = 308
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/169 (37%), Positives = 99/169 (58%), Gaps = 16/169 (9%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+ L+++FSK+GEI + DP T RSRGF F+ F D ASV+ V+ + +H +++K
Sbjct: 15 DSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFAD-----PASVDKVLGQPHHELDSK 69
Query: 174 KIEAK---------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQ 224
I+ K K ++ KIFVGGLS E++K +F QFG + + + +DK+ ++
Sbjct: 70 TIDPKVAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNR 129
Query: 225 RKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE--PFGVRG 271
+ F F+TFE+E VV + + +IN+K V+ KKA PK P G RG
Sbjct: 130 HRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMFPPGTRG 178
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 68/133 (51%), Gaps = 19/133 (14%)
Query: 58 SFSENCLLEDSIGKPLTVSCSHHYYLFDQILRTHFFYIMEAKNKMVSHPGIV-------H 110
+F++ ++ +G+P H+ L + + + A+ KMV+ + +
Sbjct: 48 TFADPASVDKVLGQP-------HHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSAN 100
Query: 111 KITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVI 170
+ E++K++F ++G++E+ L D T R RGF F+ F++ + +EK V H I
Sbjct: 101 TVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEK-----VCEIHFHEI 155
Query: 171 NNKKIEAKKAKAK 183
NNK +E KKA+ K
Sbjct: 156 NNKMVECKKAQPK 168
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 45/78 (57%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+F+GGLS + + ++ +F++FG I E + D + + + F F+TF + V +L
Sbjct: 2 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQ 61
Query: 246 PKQKINDKEVDVKKATPK 263
P +++ K +D K A P+
Sbjct: 62 PHHELDSKTIDPKVAFPR 79
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 29/43 (67%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+ L+++FSK+GEI + DP T RSRGF F+ F D S++K
Sbjct: 15 DSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDK 57
Score = 47.4 bits (111), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 61/115 (53%), Gaps = 16/115 (13%)
Query: 552 SFSENCLLEDSIGKPLTVSCSHYHYLFDQNLRTHYFYIVEAKNKMVSHPGIV-------D 604
+F++ ++ +G+P +H L + + + A+ KMV+ + +
Sbjct: 48 TFADPASVDKVLGQP-------HHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSAN 100
Query: 605 KITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFY 659
+ E++K++F ++G++E+ L D T R RGF F+ F++ + +EK V +++F+
Sbjct: 101 TVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEK--VCEIHFH 153
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 35/56 (62%), Gaps = 2/56 (3%)
Query: 452 YDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE--PFGVRG 505
+DK+ ++ + F F+TFE+E VV + + +IN+K V+ KKA PK P G RG
Sbjct: 123 FDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMFPPGTRG 178
>gi|344243477|gb|EGV99580.1| RNA-binding protein Musashi-like 2 [Cricetulus griseus]
Length = 325
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/169 (37%), Positives = 99/169 (58%), Gaps = 16/169 (9%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+ L+++FSK+GEI + DP T RSRGF F+ F D ASV+ V+ + +H +++K
Sbjct: 13 DSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFAD-----PASVDKVLGQPHHELDSK 67
Query: 174 KIEAK---------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQ 224
I+ K K ++ KIFVGGLS E++K +F QFG + + + +DK+ ++
Sbjct: 68 TIDPKVAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNR 127
Query: 225 RKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE--PFGVRG 271
+ F F+TFE+E VV + + +IN+K V+ KKA PK P G RG
Sbjct: 128 HRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMFPPGTRG 176
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 68/133 (51%), Gaps = 19/133 (14%)
Query: 58 SFSENCLLEDSIGKPLTVSCSHHYYLFDQILRTHFFYIMEAKNKMVSHPGIV-------H 110
+F++ ++ +G+P H+ L + + + A+ KMV+ + +
Sbjct: 46 TFADPASVDKVLGQP-------HHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSAN 98
Query: 111 KITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVI 170
+ E++K++F ++G++E+ L D T R RGF F+ F++ + +EK V H I
Sbjct: 99 TVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEK-----VCEIHFHEI 153
Query: 171 NNKKIEAKKAKAK 183
NNK +E KKA+ K
Sbjct: 154 NNKMVECKKAQPK 166
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 44/77 (57%)
Query: 187 IFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNP 246
+F+GGLS + + ++ +F++FG I E + D + + + F F+TF + V +L P
Sbjct: 1 MFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQP 60
Query: 247 KQKINDKEVDVKKATPK 263
+++ K +D K A P+
Sbjct: 61 HHELDSKTIDPKVAFPR 77
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 29/43 (67%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+ L+++FSK+GEI + DP T RSRGF F+ F D S++K
Sbjct: 13 DSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDK 55
Score = 47.4 bits (111), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 61/115 (53%), Gaps = 16/115 (13%)
Query: 552 SFSENCLLEDSIGKPLTVSCSHYHYLFDQNLRTHYFYIVEAKNKMVSHPGIV-------D 604
+F++ ++ +G+P +H L + + + A+ KMV+ + +
Sbjct: 46 TFADPASVDKVLGQP-------HHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSAN 98
Query: 605 KITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFY 659
+ E++K++F ++G++E+ L D T R RGF F+ F++ + +EK V +++F+
Sbjct: 99 TVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEK--VCEIHFH 151
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 35/56 (62%), Gaps = 2/56 (3%)
Query: 452 YDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE--PFGVRG 505
+DK+ ++ + F F+TFE+E VV + + +IN+K V+ KKA PK P G RG
Sbjct: 121 FDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMFPPGTRG 176
>gi|194217163|ref|XP_001500456.2| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein Musashi homolog
2-like, partial [Equus caballus]
Length = 323
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/169 (37%), Positives = 99/169 (58%), Gaps = 16/169 (9%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+ L+++FSK+GEI + DP T RSRGF F+ F D ASV+ V+ + +H +++K
Sbjct: 30 DSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFAD-----PASVDKVLGQPHHELDSK 84
Query: 174 KIEAK---------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQ 224
I+ K K ++ KIFVGGLS E++K +F QFG + + + +DK+ ++
Sbjct: 85 TIDPKVAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNR 144
Query: 225 RKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE--PFGVRG 271
+ F F+TFE+E VV + + +IN+K V+ KKA PK P G RG
Sbjct: 145 HRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMFPPGTRG 193
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 68/133 (51%), Gaps = 19/133 (14%)
Query: 58 SFSENCLLEDSIGKPLTVSCSHHYYLFDQILRTHFFYIMEAKNKMVSHPGIV-------H 110
+F++ ++ +G+P H+ L + + + A+ KMV+ + +
Sbjct: 63 TFADPASVDKVLGQP-------HHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSAN 115
Query: 111 KITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVI 170
+ E++K++F ++G++E+ L D T R RGF F+ F++ + +EK V H I
Sbjct: 116 TVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEK-----VCEIHFHEI 170
Query: 171 NNKKIEAKKAKAK 183
NNK +E KKA+ K
Sbjct: 171 NNKMVECKKAQPK 183
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 29/43 (67%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+ L+++FSK+GEI + DP T RSRGF F+ F D S++K
Sbjct: 30 DSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDK 72
Score = 47.0 bits (110), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 61/115 (53%), Gaps = 16/115 (13%)
Query: 552 SFSENCLLEDSIGKPLTVSCSHYHYLFDQNLRTHYFYIVEAKNKMVSHPGIV-------D 604
+F++ ++ +G+P +H L + + + A+ KMV+ + +
Sbjct: 63 TFADPASVDKVLGQP-------HHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSAN 115
Query: 605 KITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFY 659
+ E++K++F ++G++E+ L D T R RGF F+ F++ + +EK V +++F+
Sbjct: 116 TVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEK--VCEIHFH 168
Score = 42.4 bits (98), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 38/71 (53%)
Query: 193 SPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKIND 252
S + + ++ +F++FG I E + D + + + F F+TF + V +L P +++
Sbjct: 24 SSQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQPHHELDS 83
Query: 253 KEVDVKKATPK 263
K +D K A P+
Sbjct: 84 KTIDPKVAFPR 94
Score = 40.8 bits (94), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 35/56 (62%), Gaps = 2/56 (3%)
Query: 452 YDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE--PFGVRG 505
+DK+ ++ + F F+TFE+E VV + + +IN+K V+ KKA PK P G RG
Sbjct: 138 FDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMFPPGTRG 193
>gi|20373175|ref|NP_620412.1| RNA-binding protein Musashi homolog 2 isoform a [Homo sapiens]
gi|51316513|sp|Q96DH6.1|MSI2H_HUMAN RecName: Full=RNA-binding protein Musashi homolog 2;
Short=Musashi-2
gi|16306702|gb|AAH01526.1| Musashi homolog 2 (Drosophila) [Homo sapiens]
gi|123983004|gb|ABM83243.1| musashi homolog 2 (Drosophila) [synthetic construct]
gi|123997687|gb|ABM86445.1| musashi homolog 2 (Drosophila) [synthetic construct]
gi|261861224|dbj|BAI47134.1| musashi homolog 2 [synthetic construct]
gi|380784487|gb|AFE64119.1| RNA-binding protein Musashi homolog 2 isoform a [Macaca mulatta]
gi|383415747|gb|AFH31087.1| RNA-binding protein Musashi homolog 2 isoform a [Macaca mulatta]
gi|384941194|gb|AFI34202.1| RNA-binding protein Musashi homolog 2 isoform a [Macaca mulatta]
gi|392583801|dbj|BAM24698.2| musashi homolog 2 [Sus scrofa]
gi|410219648|gb|JAA07043.1| musashi homolog 2 [Pan troglodytes]
gi|410258766|gb|JAA17350.1| musashi homolog 2 [Pan troglodytes]
gi|410287210|gb|JAA22205.1| musashi homolog 2 [Pan troglodytes]
gi|410335871|gb|JAA36882.1| musashi homolog 2 [Pan troglodytes]
gi|417399031|gb|JAA46548.1| Putative rna-binding protein musashi/mrna cleavage and
polyadenylation factor i complex subunit hrp1 [Desmodus
rotundus]
Length = 328
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/169 (37%), Positives = 99/169 (58%), Gaps = 16/169 (9%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+ L+++FSK+GEI + DP T RSRGF F+ F D ASV+ V+ + +H +++K
Sbjct: 35 DSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFAD-----PASVDKVLGQPHHELDSK 89
Query: 174 KIEAK---------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQ 224
I+ K K ++ KIFVGGLS E++K +F QFG + + + +DK+ ++
Sbjct: 90 TIDPKVAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNR 149
Query: 225 RKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE--PFGVRG 271
+ F F+TFE+E VV + + +IN+K V+ KKA PK P G RG
Sbjct: 150 HRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMFPPGTRG 198
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 68/133 (51%), Gaps = 19/133 (14%)
Query: 58 SFSENCLLEDSIGKPLTVSCSHHYYLFDQILRTHFFYIMEAKNKMVSHPGIV-------H 110
+F++ ++ +G+P H+ L + + + A+ KMV+ + +
Sbjct: 68 TFADPASVDKVLGQP-------HHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSAN 120
Query: 111 KITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVI 170
+ E++K++F ++G++E+ L D T R RGF F+ F++ + +EK V H I
Sbjct: 121 TVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEK-----VCEIHFHEI 175
Query: 171 NNKKIEAKKAKAK 183
NNK +E KKA+ K
Sbjct: 176 NNKMVECKKAQPK 188
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 49/87 (56%)
Query: 177 AKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHE 236
A ++ GK+F+GGLS + + ++ +F++FG I E + D + + + F F+TF
Sbjct: 13 ANDSQHDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADP 72
Query: 237 SVVIDLLKNPKQKINDKEVDVKKATPK 263
+ V +L P +++ K +D K A P+
Sbjct: 73 ASVDKVLGQPHHELDSKTIDPKVAFPR 99
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 29/43 (67%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+ L+++FSK+GEI + DP T RSRGF F+ F D S++K
Sbjct: 35 DSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDK 77
Score = 47.4 bits (111), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 61/115 (53%), Gaps = 16/115 (13%)
Query: 552 SFSENCLLEDSIGKPLTVSCSHYHYLFDQNLRTHYFYIVEAKNKMVSHPGIV-------D 604
+F++ ++ +G+P +H L + + + A+ KMV+ + +
Sbjct: 68 TFADPASVDKVLGQP-------HHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSAN 120
Query: 605 KITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFY 659
+ E++K++F ++G++E+ L D T R RGF F+ F++ + +EK V +++F+
Sbjct: 121 TVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEK--VCEIHFH 173
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 35/56 (62%), Gaps = 2/56 (3%)
Query: 452 YDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE--PFGVRG 505
+DK+ ++ + F F+TFE+E VV + + +IN+K V+ KKA PK P G RG
Sbjct: 143 FDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMFPPGTRG 198
>gi|392332125|ref|XP_001081205.3| PREDICTED: RNA-binding protein Musashi homolog 2-like [Rattus
norvegicus]
Length = 295
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/169 (37%), Positives = 99/169 (58%), Gaps = 16/169 (9%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+ L+++FSK+GEI + DP T RSRGF F+ F D ASV+ V+ + +H +++K
Sbjct: 2 DSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFAD-----PASVDKVLGQPHHELDSK 56
Query: 174 KIEAK---------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQ 224
I+ K K ++ KIFVGGLS E++K +F QFG + + + +DK+ ++
Sbjct: 57 TIDPKVAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNR 116
Query: 225 RKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE--PFGVRG 271
+ F F+TFE+E VV + + +IN+K V+ KKA PK P G RG
Sbjct: 117 HRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMFPPGTRG 165
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 68/133 (51%), Gaps = 19/133 (14%)
Query: 58 SFSENCLLEDSIGKPLTVSCSHHYYLFDQILRTHFFYIMEAKNKMVSHPGIV-------H 110
+F++ ++ +G+P H+ L + + + A+ KMV+ + +
Sbjct: 35 TFADPASVDKVLGQP-------HHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSAN 87
Query: 111 KITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVI 170
+ E++K++F ++G++E+ L D T R RGF F+ F++ + +EK V H I
Sbjct: 88 TVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEK-----VCEIHFHEI 142
Query: 171 NNKKIEAKKAKAK 183
NNK +E KKA+ K
Sbjct: 143 NNKMVECKKAQPK 155
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 29/43 (67%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+ L+++FSK+GEI + DP T RSRGF F+ F D S++K
Sbjct: 2 DSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDK 44
Score = 47.0 bits (110), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 61/115 (53%), Gaps = 16/115 (13%)
Query: 552 SFSENCLLEDSIGKPLTVSCSHYHYLFDQNLRTHYFYIVEAKNKMVSHPGIV-------D 604
+F++ ++ +G+P +H L + + + A+ KMV+ + +
Sbjct: 35 TFADPASVDKVLGQP-------HHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSAN 87
Query: 605 KITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFY 659
+ E++K++F ++G++E+ L D T R RGF F+ F++ + +EK V +++F+
Sbjct: 88 TVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEK--VCEIHFH 140
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 35/56 (62%), Gaps = 2/56 (3%)
Query: 452 YDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE--PFGVRG 505
+DK+ ++ + F F+TFE+E VV + + +IN+K V+ KKA PK P G RG
Sbjct: 110 FDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMFPPGTRG 165
>gi|89266511|gb|ABD65547.1| heterogeneous nuclear ribonucleoprotein-like [Ictalurus punctatus]
Length = 236
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 55/139 (39%), Positives = 87/139 (62%), Gaps = 10/139 (7%)
Query: 130 TLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNKKIEAKKAKAKSGK--- 186
T+K+DP TGRSRGF F++FKD +S+++ V+ H ++ K I+ K+AKA GK
Sbjct: 1 TIKTDPMTGRSRGFGFVLFKDAQSVDR-----VLELKEHKLDGKLIDPKRAKAMKGKEPP 55
Query: 187 --IFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
+FVGGL PE +E+I+ +F +G+I E+P D + ++R+ FCF+T+ E V LL+
Sbjct: 56 KKVFVGGLRPETSEEQIREYFGSYGDIENIELPVDSNTNERRGFCFVTYVDEEPVTKLLE 115
Query: 245 NPKQKINDKEVDVKKATPK 263
N + + ++K A PK
Sbjct: 116 NRYHNVGAGKCEIKVAQPK 134
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 5/70 (7%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
E+++E+F YG+IEN+ L D NT RGF F+ + D E + K ++ H +
Sbjct: 70 EQIREYFGSYGDIENIELPVDSNTNERRGFCFVTYVDEEPVTK-----LLENRYHNVGAG 124
Query: 174 KIEAKKAKAK 183
K E K A+ K
Sbjct: 125 KCEIKVAQPK 134
Score = 46.6 bits (109), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 28/43 (65%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
E+++E+F YG+IEN+ L D NT RGF F+ + D E + K
Sbjct: 70 EQIREYFGSYGDIENIELPVDSNTNERRGFCFVTYVDEEPVTK 112
Score = 43.1 bits (100), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 24/28 (85%)
Query: 624 TLKSDPNTGRSRGFAFIVFKDTESLEKA 651
T+K+DP TGRSRGF F++FKD +S+++
Sbjct: 1 TIKTDPMTGRSRGFGFVLFKDAQSVDRV 28
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 31/54 (57%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 497
+I E+P D + ++R+ FCF+T+ E V LL+N + + ++K A PK
Sbjct: 81 DIENIELPVDSNTNERRGFCFVTYVDEEPVTKLLENRYHNVGAGKCEIKVAQPK 134
>gi|15982560|dbj|BAB69484.1| RNA-binding protein Musashi2-S [Mus musculus]
gi|26340376|dbj|BAC33851.1| unnamed protein product [Mus musculus]
gi|26340420|dbj|BAC33873.1| unnamed protein product [Mus musculus]
gi|85057100|gb|AAI11810.1| Msi2h protein [Mus musculus]
Length = 328
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/169 (37%), Positives = 99/169 (58%), Gaps = 16/169 (9%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+ L+++FSK+GEI + DP T RSRGF F+ F D ASV+ V+ + +H +++K
Sbjct: 35 DSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFAD-----PASVDKVLGQPHHELDSK 89
Query: 174 KIEAK---------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQ 224
I+ K K ++ KIFVGGLS E++K +F QFG + + + +DK+ ++
Sbjct: 90 TIDPKVAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNR 149
Query: 225 RKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE--PFGVRG 271
+ F F+TFE+E VV + + +IN+K V+ KKA PK P G RG
Sbjct: 150 HRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMFPPGTRG 198
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 68/133 (51%), Gaps = 19/133 (14%)
Query: 58 SFSENCLLEDSIGKPLTVSCSHHYYLFDQILRTHFFYIMEAKNKMVSHPGIV-------H 110
+F++ ++ +G+P H+ L + + + A+ KMV+ + +
Sbjct: 68 TFADPASVDKVLGQP-------HHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSAN 120
Query: 111 KITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVI 170
+ E++K++F ++G++E+ L D T R RGF F+ F++ + +EK V H I
Sbjct: 121 TVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEK-----VCEIHFHEI 175
Query: 171 NNKKIEAKKAKAK 183
NNK +E KKA+ K
Sbjct: 176 NNKMVECKKAQPK 188
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 49/87 (56%)
Query: 177 AKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHE 236
A ++ GK+F+GGLS + + ++ +F++FG I E + D + + + F F+TF
Sbjct: 13 ANDSQHDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADP 72
Query: 237 SVVIDLLKNPKQKINDKEVDVKKATPK 263
+ V +L P +++ K +D K A P+
Sbjct: 73 ASVDKVLGQPHHELDSKTIDPKVAFPR 99
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 29/43 (67%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+ L+++FSK+GEI + DP T RSRGF F+ F D S++K
Sbjct: 35 DSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDK 77
Score = 47.4 bits (111), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 61/115 (53%), Gaps = 16/115 (13%)
Query: 552 SFSENCLLEDSIGKPLTVSCSHYHYLFDQNLRTHYFYIVEAKNKMVSHPGIV-------D 604
+F++ ++ +G+P +H L + + + A+ KMV+ + +
Sbjct: 68 TFADPASVDKVLGQP-------HHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSAN 120
Query: 605 KITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFY 659
+ E++K++F ++G++E+ L D T R RGF F+ F++ + +EK V +++F+
Sbjct: 121 TVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEK--VCEIHFH 173
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 35/56 (62%), Gaps = 2/56 (3%)
Query: 452 YDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE--PFGVRG 505
+DK+ ++ + F F+TFE+E VV + + +IN+K V+ KKA PK P G RG
Sbjct: 143 FDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMFPPGTRG 198
>gi|355704546|gb|AES02263.1| musashi-like protein 2 [Mustela putorius furo]
Length = 306
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/169 (37%), Positives = 99/169 (58%), Gaps = 16/169 (9%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+ L+++FSK+GEI + DP T RSRGF F+ F D ASV+ V+ + +H +++K
Sbjct: 14 DSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFAD-----PASVDKVLGQPHHELDSK 68
Query: 174 KIEAK---------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQ 224
I+ K K ++ KIFVGGLS E++K +F QFG + + + +DK+ ++
Sbjct: 69 TIDPKVAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNR 128
Query: 225 RKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE--PFGVRG 271
+ F F+TFE+E VV + + +IN+K V+ KKA PK P G RG
Sbjct: 129 HRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMFPPGTRG 177
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 68/133 (51%), Gaps = 19/133 (14%)
Query: 58 SFSENCLLEDSIGKPLTVSCSHHYYLFDQILRTHFFYIMEAKNKMVSHPGIV-------H 110
+F++ ++ +G+P H+ L + + + A+ KMV+ + +
Sbjct: 47 TFADPASVDKVLGQP-------HHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSAN 99
Query: 111 KITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVI 170
+ E++K++F ++G++E+ L D T R RGF F+ F++ + +EK V H I
Sbjct: 100 TVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEK-----VCEIHFHEI 154
Query: 171 NNKKIEAKKAKAK 183
NNK +E KKA+ K
Sbjct: 155 NNKMVECKKAQPK 167
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 45/78 (57%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+F+GGLS + + ++ +F++FG I E + D + + + F F+TF + V +L
Sbjct: 1 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQ 60
Query: 246 PKQKINDKEVDVKKATPK 263
P +++ K +D K A P+
Sbjct: 61 PHHELDSKTIDPKVAFPR 78
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 29/43 (67%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+ L+++FSK+GEI + DP T RSRGF F+ F D S++K
Sbjct: 14 DSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDK 56
Score = 47.0 bits (110), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 61/115 (53%), Gaps = 16/115 (13%)
Query: 552 SFSENCLLEDSIGKPLTVSCSHYHYLFDQNLRTHYFYIVEAKNKMVSHPGIV-------D 604
+F++ ++ +G+P +H L + + + A+ KMV+ + +
Sbjct: 47 TFADPASVDKVLGQP-------HHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSAN 99
Query: 605 KITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFY 659
+ E++K++F ++G++E+ L D T R RGF F+ F++ + +EK V +++F+
Sbjct: 100 TVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEK--VCEIHFH 152
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 35/56 (62%), Gaps = 2/56 (3%)
Query: 452 YDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE--PFGVRG 505
+DK+ ++ + F F+TFE+E VV + + +IN+K V+ KKA PK P G RG
Sbjct: 122 FDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMFPPGTRG 177
>gi|119614917|gb|EAW94511.1| musashi homolog 2 (Drosophila), isoform CRA_f [Homo sapiens]
Length = 328
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/169 (37%), Positives = 99/169 (58%), Gaps = 16/169 (9%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+ L+++FSK+GEI + DP T RSRGF F+ F D ASV+ V+ + +H +++K
Sbjct: 35 DSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFAD-----PASVDKVLGQPHHELDSK 89
Query: 174 KIEAK---------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQ 224
I+ K K ++ KIFVGGLS E++K +F QFG + + + +DK+ ++
Sbjct: 90 TIDPKVAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNR 149
Query: 225 RKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE--PFGVRG 271
+ F F+TFE+E VV + + +IN+K V+ KKA PK P G RG
Sbjct: 150 HRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMFPPGTRG 198
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 68/133 (51%), Gaps = 19/133 (14%)
Query: 58 SFSENCLLEDSIGKPLTVSCSHHYYLFDQILRTHFFYIMEAKNKMVSHPGIV-------H 110
+F++ ++ +G+P H+ L + + + A+ KMV+ + +
Sbjct: 68 TFADPASVDKVLGQP-------HHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSAN 120
Query: 111 KITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVI 170
+ E++K++F ++G++E+ L D T R RGF F+ F++ + +EK V H I
Sbjct: 121 TVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEK-----VCEIHFHEI 175
Query: 171 NNKKIEAKKAKAK 183
NNK +E KKA+ K
Sbjct: 176 NNKMVECKKAQPK 188
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 49/87 (56%)
Query: 177 AKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHE 236
A ++ GK+F+GGLS + + ++ +F++FG I E + D + + + F F+TF
Sbjct: 13 ANDSQHDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADP 72
Query: 237 SVVIDLLKNPKQKINDKEVDVKKATPK 263
+ V +L P +++ K +D K A P+
Sbjct: 73 ASVDKVLGQPHHELDSKTIDPKVAFPR 99
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 29/43 (67%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+ L+++FSK+GEI + DP T RSRGF F+ F D S++K
Sbjct: 35 DSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDK 77
Score = 47.4 bits (111), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 61/115 (53%), Gaps = 16/115 (13%)
Query: 552 SFSENCLLEDSIGKPLTVSCSHYHYLFDQNLRTHYFYIVEAKNKMVSHPGIV-------D 604
+F++ ++ +G+P +H L + + + A+ KMV+ + +
Sbjct: 68 TFADPASVDKVLGQP-------HHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSAN 120
Query: 605 KITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFY 659
+ E++K++F ++G++E+ L D T R RGF F+ F++ + +EK V +++F+
Sbjct: 121 TVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEK--VCEIHFH 173
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 35/56 (62%), Gaps = 2/56 (3%)
Query: 452 YDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE--PFGVRG 505
+DK+ ++ + F F+TFE+E VV + + +IN+K V+ KKA PK P G RG
Sbjct: 143 FDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMFPPGTRG 198
>gi|291405742|ref|XP_002719144.1| PREDICTED: musashi 2-like [Oryctolagus cuniculus]
Length = 306
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/169 (37%), Positives = 99/169 (58%), Gaps = 16/169 (9%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+ L+++FSK+GEI + DP T RSRGF F+ F D ASV+ V+ + +H +++K
Sbjct: 13 DSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFAD-----PASVDKVLGQPHHELDSK 67
Query: 174 KIEAK---------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQ 224
I+ K K ++ KIFVGGLS E++K +F QFG + + + +DK+ ++
Sbjct: 68 TIDPKVAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNR 127
Query: 225 RKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE--PFGVRG 271
+ F F+TFE+E VV + + +IN+K V+ KKA PK P G RG
Sbjct: 128 HRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMFPPGTRG 176
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 68/133 (51%), Gaps = 19/133 (14%)
Query: 58 SFSENCLLEDSIGKPLTVSCSHHYYLFDQILRTHFFYIMEAKNKMVSHPGIV-------H 110
+F++ ++ +G+P H+ L + + + A+ KMV+ + +
Sbjct: 46 TFADPASVDKVLGQP-------HHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSAN 98
Query: 111 KITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVI 170
+ E++K++F ++G++E+ L D T R RGF F+ F++ + +EK V H I
Sbjct: 99 TVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEK-----VCEIHFHEI 153
Query: 171 NNKKIEAKKAKAK 183
NNK +E KKA+ K
Sbjct: 154 NNKMVECKKAQPK 166
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 44/77 (57%)
Query: 187 IFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNP 246
+F+GGLS + + ++ +F++FG I E + D + + + F F+TF + V +L P
Sbjct: 1 MFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQP 60
Query: 247 KQKINDKEVDVKKATPK 263
+++ K +D K A P+
Sbjct: 61 HHELDSKTIDPKVAFPR 77
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 29/43 (67%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+ L+++FSK+GEI + DP T RSRGF F+ F D S++K
Sbjct: 13 DSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDK 55
Score = 47.0 bits (110), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 61/115 (53%), Gaps = 16/115 (13%)
Query: 552 SFSENCLLEDSIGKPLTVSCSHYHYLFDQNLRTHYFYIVEAKNKMVSHPGIV-------D 604
+F++ ++ +G+P +H L + + + A+ KMV+ + +
Sbjct: 46 TFADPASVDKVLGQP-------HHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSAN 98
Query: 605 KITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFY 659
+ E++K++F ++G++E+ L D T R RGF F+ F++ + +EK V +++F+
Sbjct: 99 TVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEK--VCEIHFH 151
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 35/56 (62%), Gaps = 2/56 (3%)
Query: 452 YDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE--PFGVRG 505
+DK+ ++ + F F+TFE+E VV + + +IN+K V+ KKA PK P G RG
Sbjct: 121 FDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMFPPGTRG 176
>gi|28571891|ref|NP_733108.2| musashi, isoform B [Drosophila melanogaster]
gi|386766502|ref|NP_001247303.1| musashi, isoform C [Drosophila melanogaster]
gi|442621134|ref|NP_001262960.1| musashi, isoform F [Drosophila melanogaster]
gi|28381465|gb|AAN14056.2| musashi, isoform B [Drosophila melanogaster]
gi|383292949|gb|AFH06620.1| musashi, isoform C [Drosophila melanogaster]
gi|383505544|gb|AFH36351.1| FI20028p1 [Drosophila melanogaster]
gi|440217893|gb|AGB96340.1| musashi, isoform F [Drosophila melanogaster]
Length = 634
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/159 (39%), Positives = 95/159 (59%), Gaps = 13/159 (8%)
Query: 113 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINN 172
+++LKE+F+ +G + +V + DP T RSRGF FI F+ E +VE V+ H ++
Sbjct: 216 SDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQ-----EPCTVEKVLKVPIHTLDG 270
Query: 173 KKIEAKKAKAK--------SGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQ 224
KKI+ K A K + KIFVGG+S + EE+KA+F+QFG + ET M D+ +
Sbjct: 271 KKIDPKHATPKNRPRQANKTKKIFVGGVSQDTSAEEVKAYFSQFGPVEETVMLMDQQTKR 330
Query: 225 RKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ F F+TFE+E VV + + I +K+V+ KKA PK
Sbjct: 331 HRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPK 369
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 47/82 (57%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GK+FVGGLS + +++K +F FG + + + D + + F FITF+ V +LK
Sbjct: 203 GKLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVEKVLK 262
Query: 245 NPKQKINDKEVDVKKATPKPEP 266
P ++ K++D K ATPK P
Sbjct: 263 VPIHTLDGKKIDPKHATPKNRP 284
Score = 47.0 bits (110), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 32/44 (72%)
Query: 607 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+++LKE+F+ +G + +V + DP T RSRGF FI F++ ++EK
Sbjct: 216 SDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVEK 259
Score = 43.9 bits (102), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFYS 660
D EE+K +FS++G +E + D T R RGF F+ F++ + +++ V +++F++
Sbjct: 301 DTSAEEVKAYFSQFGPVEETVMLMDQQTKRHRGFGFVTFENEDVVDR--VCEIHFHT 355
>gi|195504299|ref|XP_002099019.1| GE23609 [Drosophila yakuba]
gi|194185120|gb|EDW98731.1| GE23609 [Drosophila yakuba]
Length = 637
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/159 (39%), Positives = 95/159 (59%), Gaps = 13/159 (8%)
Query: 113 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINN 172
+++LKE+F+ +G + +V + DP T RSRGF FI F+ E +VE V+ H ++
Sbjct: 219 SDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQ-----EPCTVEKVLKVPIHTLDG 273
Query: 173 KKIEAKKAKAK--------SGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQ 224
KKI+ K A K + KIFVGG+S + EE+KA+F+QFG + ET M D+ +
Sbjct: 274 KKIDPKHATPKNRPRQANKTKKIFVGGVSQDTSAEEVKAYFSQFGPVEETVMLMDQQTKR 333
Query: 225 RKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ F F+TFE+E VV + + I +K+V+ KKA PK
Sbjct: 334 HRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPK 372
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 47/82 (57%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GK+FVGGLS + +++K +F FG + + + D + + F FITF+ V +LK
Sbjct: 206 GKLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVEKVLK 265
Query: 245 NPKQKINDKEVDVKKATPKPEP 266
P ++ K++D K ATPK P
Sbjct: 266 VPIHTLDGKKIDPKHATPKNRP 287
Score = 47.0 bits (110), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 32/44 (72%)
Query: 607 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+++LKE+F+ +G + +V + DP T RSRGF FI F++ ++EK
Sbjct: 219 SDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVEK 262
Score = 43.5 bits (101), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFYS 660
D EE+K +FS++G +E + D T R RGF F+ F++ + +++ V +++F++
Sbjct: 304 DTSAEEVKAYFSQFGPVEETVMLMDQQTKRHRGFGFVTFENEDVVDR--VCEIHFHT 358
>gi|21430706|gb|AAM51031.1| RH49436p [Drosophila melanogaster]
Length = 634
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/159 (39%), Positives = 95/159 (59%), Gaps = 13/159 (8%)
Query: 113 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINN 172
+++LKE+F+ +G + +V + DP T RSRGF FI F+ E +VE V+ H ++
Sbjct: 216 SDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQ-----EPCTVEKVLKVPIHTLDG 270
Query: 173 KKIEAKKAKAK--------SGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQ 224
KKI+ K A K + KIFVGG+S + EE+KA+F+QFG + ET M D+ +
Sbjct: 271 KKIDPKHATPKNRPRQANKTKKIFVGGVSQDTSAEEVKAYFSQFGPVEETVMLMDQQTKR 330
Query: 225 RKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ F F+TFE+E VV + + I +K+V+ KKA PK
Sbjct: 331 HRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPK 369
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 47/82 (57%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GK+FVGGLS + +++K +F FG + + + D + + F FITF+ V +LK
Sbjct: 203 GKLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVEKVLK 262
Query: 245 NPKQKINDKEVDVKKATPKPEP 266
P ++ K++D K ATPK P
Sbjct: 263 VPIHTLDGKKIDPKHATPKNRP 284
Score = 47.0 bits (110), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 32/44 (72%)
Query: 607 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+++LKE+F+ +G + +V + DP T RSRGF FI F++ ++EK
Sbjct: 216 SDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVEK 259
Score = 43.9 bits (102), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFYS 660
D EE+K +FS++G +E + D T R RGF F+ F++ + +++ V +++F++
Sbjct: 301 DTSAEEVKAYFSQFGPVEETVMLMDQQTKRHRGFGFVTFENEDVVDR--VCEIHFHT 355
>gi|195125567|ref|XP_002007249.1| GI12835 [Drosophila mojavensis]
gi|193918858|gb|EDW17725.1| GI12835 [Drosophila mojavensis]
Length = 383
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 93/159 (58%), Gaps = 14/159 (8%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
E L+++F +YG+I + DP T RSRGF F+ F D S++K V+ +G H ++ K
Sbjct: 57 ESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVDK-----VLTQGTHELDGK 111
Query: 174 KIEAK---------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQ 224
K++ K K ++ KIFVGGLS E++K++F QFG I + + +DK ++
Sbjct: 112 KVDPKVAFPRRAHPKMVTRTKKIFVGGLSAPTTLEDVKSYFEQFGPIEDAMLMFDKQTNR 171
Query: 225 RKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ F F+TF+ E VV + + +IN+K V+ KKA PK
Sbjct: 172 HRGFGFVTFQSEDVVDKVCEIHFHEINNKMVECKKAQPK 210
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 46/79 (58%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GK+F+GGLS + E ++ +F ++G+I E + D + + + F F+TF + V +L
Sbjct: 43 GKMFIGGLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVDKVLT 102
Query: 245 NPKQKINDKEVDVKKATPK 263
+++ K+VD K A P+
Sbjct: 103 QGTHELDGKKVDPKVAFPR 121
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 28/43 (65%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
E L+++F +YG+I + DP T RSRGF F+ F D S++K
Sbjct: 57 ESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVDK 99
>gi|194908488|ref|XP_001981778.1| GG11413 [Drosophila erecta]
gi|190656416|gb|EDV53648.1| GG11413 [Drosophila erecta]
Length = 635
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/159 (39%), Positives = 95/159 (59%), Gaps = 13/159 (8%)
Query: 113 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINN 172
+++LKE+F+ +G + +V + DP T RSRGF FI F+ E +VE V+ H ++
Sbjct: 217 SDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQ-----EPCTVEKVLKVPIHTLDG 271
Query: 173 KKIEAKKAKAK--------SGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQ 224
KKI+ K A K + KIFVGG+S + EE+KA+F+QFG + ET M D+ +
Sbjct: 272 KKIDPKHATPKNRPRQANKTKKIFVGGVSQDTSAEEVKAYFSQFGPVEETVMLMDQQTKR 331
Query: 225 RKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ F F+TFE+E VV + + I +K+V+ KKA PK
Sbjct: 332 HRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPK 370
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 47/82 (57%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GK+FVGGLS + +++K +F FG + + + D + + F FITF+ V +LK
Sbjct: 204 GKLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVEKVLK 263
Query: 245 NPKQKINDKEVDVKKATPKPEP 266
P ++ K++D K ATPK P
Sbjct: 264 VPIHTLDGKKIDPKHATPKNRP 285
Score = 47.0 bits (110), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 32/44 (72%)
Query: 607 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+++LKE+F+ +G + +V + DP T RSRGF FI F++ ++EK
Sbjct: 217 SDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVEK 260
Score = 43.5 bits (101), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFYS 660
D EE+K +FS++G +E + D T R RGF F+ F++ + +++ V +++F++
Sbjct: 302 DTSAEEVKAYFSQFGPVEETVMLMDQQTKRHRGFGFVTFENEDVVDR--VCEIHFHT 356
>gi|194748703|ref|XP_001956784.1| GF24401 [Drosophila ananassae]
gi|190624066|gb|EDV39590.1| GF24401 [Drosophila ananassae]
Length = 370
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 93/159 (58%), Gaps = 14/159 (8%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
E L+++F +YG+I + DP T RSRGF F+ F D S++K V+ +G H ++ K
Sbjct: 44 ESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVDK-----VLTQGTHELDGK 98
Query: 174 KIEAK---------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQ 224
K++ K K ++ KIFVGGLS E++K++F QFG I + + +DK ++
Sbjct: 99 KVDPKVAFPRRAHPKMVTRTKKIFVGGLSAPTTLEDVKSYFEQFGPIEDAMLMFDKQTNR 158
Query: 225 RKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ F F+TF+ E VV + + +IN+K V+ KKA PK
Sbjct: 159 HRGFGFVTFQSEDVVDKVCEIHFHEINNKMVECKKAQPK 197
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 46/79 (58%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GK+F+GGLS + E ++ +F ++G+I E + D + + + F F+TF + V +L
Sbjct: 30 GKMFIGGLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVDKVLT 89
Query: 245 NPKQKINDKEVDVKKATPK 263
+++ K+VD K A P+
Sbjct: 90 QGTHELDGKKVDPKVAFPR 108
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 28/43 (65%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
E L+++F +YG+I + DP T RSRGF F+ F D S++K
Sbjct: 44 ESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVDK 86
Score = 38.9 bits (89), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 43/107 (40%), Gaps = 20/107 (18%)
Query: 452 YDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGVRGGRGGRG 511
+DK ++ + F F+TF+ E VV + + +IN+K V+ KKA PK +
Sbjct: 152 FDKQTNRHRGFGFVTFQSEDVVDKVCEIHFHEINNKMVECKKAQPKEVMLPANLAKTRAA 211
Query: 512 GRGGRGGRMAG--------------------GYGGYGGYGGGYGELD 538
GR M G GY GY +G Y +D
Sbjct: 212 GRSAYDNIMWGLGTLPEGFPAAAYAAYAAGRGYSGYPSFGLPYPTVD 258
>gi|195349467|ref|XP_002041266.1| GM10251 [Drosophila sechellia]
gi|194122961|gb|EDW45004.1| GM10251 [Drosophila sechellia]
Length = 634
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/159 (39%), Positives = 95/159 (59%), Gaps = 13/159 (8%)
Query: 113 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINN 172
+++LKE+F+ +G + +V + DP T RSRGF FI F+ E +VE V+ H ++
Sbjct: 216 SDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQ-----EPCTVEKVLKVPIHTLDG 270
Query: 173 KKIEAKKAKAK--------SGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQ 224
KKI+ K A K + KIFVGG+S + EE+KA+F+QFG + ET M D+ +
Sbjct: 271 KKIDPKHATPKNRPRQANKTKKIFVGGVSQDTSAEEVKAYFSQFGPVEETVMLMDQQTKR 330
Query: 225 RKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ F F+TFE+E VV + + I +K+V+ KKA PK
Sbjct: 331 HRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPK 369
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 47/82 (57%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GK+FVGGLS + +++K +F FG + + + D + + F FITF+ V +LK
Sbjct: 203 GKLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVEKVLK 262
Query: 245 NPKQKINDKEVDVKKATPKPEP 266
P ++ K++D K ATPK P
Sbjct: 263 VPIHTLDGKKIDPKHATPKNRP 284
Score = 47.0 bits (110), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 32/44 (72%)
Query: 607 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+++LKE+F+ +G + +V + DP T RSRGF FI F++ ++EK
Sbjct: 216 SDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVEK 259
Score = 43.5 bits (101), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFYS 660
D EE+K +FS++G +E + D T R RGF F+ F++ + +++ V +++F++
Sbjct: 301 DTSAEEVKAYFSQFGPVEETVMLMDQQTKRHRGFGFVTFENEDVVDR--VCEIHFHT 355
>gi|442621136|ref|NP_001262961.1| musashi, isoform H [Drosophila melanogaster]
gi|440217894|gb|AGB96341.1| musashi, isoform H [Drosophila melanogaster]
Length = 567
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/159 (39%), Positives = 95/159 (59%), Gaps = 13/159 (8%)
Query: 113 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINN 172
+++LKE+F+ +G + +V + DP T RSRGF FI F+ E +VE V+ H ++
Sbjct: 149 SDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQ-----EPCTVEKVLKVPIHTLDG 203
Query: 173 KKIEAKKAKAK--------SGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQ 224
KKI+ K A K + KIFVGG+S + EE+KA+F+QFG + ET M D+ +
Sbjct: 204 KKIDPKHATPKNRPRQANKTKKIFVGGVSQDTSAEEVKAYFSQFGPVEETVMLMDQQTKR 263
Query: 225 RKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ F F+TFE+E VV + + I +K+V+ KKA PK
Sbjct: 264 HRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPK 302
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 47/82 (57%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GK+FVGGLS + +++K +F FG + + + D + + F FITF+ V +LK
Sbjct: 136 GKLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVEKVLK 195
Query: 245 NPKQKINDKEVDVKKATPKPEP 266
P ++ K++D K ATPK P
Sbjct: 196 VPIHTLDGKKIDPKHATPKNRP 217
Score = 47.0 bits (110), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 32/44 (72%)
Query: 607 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+++LKE+F+ +G + +V + DP T RSRGF FI F++ ++EK
Sbjct: 149 SDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVEK 192
Score = 43.5 bits (101), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFYS 660
D EE+K +FS++G +E + D T R RGF F+ F++ + +++ V +++F++
Sbjct: 234 DTSAEEVKAYFSQFGPVEETVMLMDQQTKRHRGFGFVTFENEDVVDR--VCEIHFHT 288
>gi|17157989|ref|NP_473384.1| RNA-binding protein Musashi homolog 2 isoform 1 [Mus musculus]
gi|51316506|sp|Q920Q6.1|MSI2H_MOUSE RecName: Full=RNA-binding protein Musashi homolog 2;
Short=Musashi-2
gi|15982562|dbj|BAB69485.1| RNA-binding protein Musashi2-L [Mus musculus]
gi|37619701|tpg|DAA01567.1| TPA_exp: RNA-binding protein [Mus musculus]
gi|74146912|dbj|BAE41407.1| unnamed protein product [Mus musculus]
gi|74150444|dbj|BAE32260.1| unnamed protein product [Mus musculus]
Length = 346
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/169 (37%), Positives = 99/169 (58%), Gaps = 16/169 (9%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+ L+++FSK+GEI + DP T RSRGF F+ F D ASV+ V+ + +H +++K
Sbjct: 35 DSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFAD-----PASVDKVLGQPHHELDSK 89
Query: 174 KIEAK---------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQ 224
I+ K K ++ KIFVGGLS E++K +F QFG + + + +DK+ ++
Sbjct: 90 TIDPKVAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNR 149
Query: 225 RKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE--PFGVRG 271
+ F F+TFE+E VV + + +IN+K V+ KKA PK P G RG
Sbjct: 150 HRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMFPPGTRG 198
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 68/133 (51%), Gaps = 19/133 (14%)
Query: 58 SFSENCLLEDSIGKPLTVSCSHHYYLFDQILRTHFFYIMEAKNKMVSHPGIV-------H 110
+F++ ++ +G+P H+ L + + + A+ KMV+ + +
Sbjct: 68 TFADPASVDKVLGQP-------HHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSAN 120
Query: 111 KITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVI 170
+ E++K++F ++G++E+ L D T R RGF F+ F++ + +EK V H I
Sbjct: 121 TVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEK-----VCEIHFHEI 175
Query: 171 NNKKIEAKKAKAK 183
NNK +E KKA+ K
Sbjct: 176 NNKMVECKKAQPK 188
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 49/88 (55%)
Query: 176 EAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEH 235
A ++ GK+F+GGLS + + ++ +F++FG I E + D + + + F F+TF
Sbjct: 12 SANDSQHDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFAD 71
Query: 236 ESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ V +L P +++ K +D K A P+
Sbjct: 72 PASVDKVLGQPHHELDSKTIDPKVAFPR 99
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 29/43 (67%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+ L+++FSK+GEI + DP T RSRGF F+ F D S++K
Sbjct: 35 DSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDK 77
Score = 47.4 bits (111), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 61/115 (53%), Gaps = 16/115 (13%)
Query: 552 SFSENCLLEDSIGKPLTVSCSHYHYLFDQNLRTHYFYIVEAKNKMVSHPGIV-------D 604
+F++ ++ +G+P +H L + + + A+ KMV+ + +
Sbjct: 68 TFADPASVDKVLGQP-------HHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSAN 120
Query: 605 KITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFY 659
+ E++K++F ++G++E+ L D T R RGF F+ F++ + +EK V +++F+
Sbjct: 121 TVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEK--VCEIHFH 173
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 35/56 (62%), Gaps = 2/56 (3%)
Query: 452 YDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE--PFGVRG 505
+DK+ ++ + F F+TFE+E VV + + +IN+K V+ KKA PK P G RG
Sbjct: 143 FDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMFPPGTRG 198
>gi|385303294|gb|EIF47378.1| subunit of cleavage factor i, partial [Dekkera bruxellensis
AWRI1499]
Length = 298
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 103/170 (60%), Gaps = 11/170 (6%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
E L ++F ++GE+ + + D TGRSRGFAF+ FKD++S+ D + + HV++ K
Sbjct: 13 ESLGKYFGQFGEVTELHIMRDTATGRSRGFAFLTFKDSKSV------DEVLKQKHVLDGK 66
Query: 174 KIEAKKA-----KAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNF 228
I+ K+A + K+GKIFVGG++P++ +E +F QFG+II++++ DK + + +
Sbjct: 67 LIDPKRAIPREEQDKTGKIFVGGIAPDVTHQEFTDYFKQFGDIIDSQLMLDKDTGKSRGY 126
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGVRGGRGGRGG 278
F+T++ V + +N + +++++KKA P+ + GG G GG
Sbjct: 127 GFVTYDSADAVARVTRNKYVMFHGRQMEIKKAEPRNQQRKPXGGFGSYGG 176
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 187 IFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNP 246
+F+GGL+ E +E + +F QFG + E + D + + + F F+TF+ V ++LK
Sbjct: 1 MFIGGLTWETDEESLGKYFGQFGEVTELHIMRDTATGRSRGFAFLTFKDSKSVDEVLKQ- 59
Query: 247 KQKINDKEVDVKKATPKPE 265
K ++ K +D K+A P+ E
Sbjct: 60 KHVLDGKLIDPKRAIPREE 78
Score = 47.0 bits (110), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 32/43 (74%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
E L ++F ++GE+ + + D TGRSRGFAF+ FKD++S+++
Sbjct: 13 ESLGKYFGQFGEVTELHIMRDTATGRSRGFAFLTFKDSKSVDE 55
Score = 39.3 bits (90), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 44/84 (52%), Gaps = 2/84 (2%)
Query: 431 DMMHMEVTEAVPM--EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKE 488
D+ H E T+ +II++++ DK + + + F+T++ V + +N + ++
Sbjct: 93 DVTHQEFTDYFKQFGDIIDSQLMLDKDTGKSRGYGFVTYDSADAVARVTRNKYVMFHGRQ 152
Query: 489 VDVKKATPKPEPFGVRGGRGGRGG 512
+++KKA P+ + GG G GG
Sbjct: 153 MEIKKAEPRNQQRKPXGGFGSYGG 176
>gi|119614912|gb|EAW94506.1| musashi homolog 2 (Drosophila), isoform CRA_a [Homo sapiens]
Length = 346
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/169 (37%), Positives = 99/169 (58%), Gaps = 16/169 (9%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+ L+++FSK+GEI + DP T RSRGF F+ F D ASV+ V+ + +H +++K
Sbjct: 35 DSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFAD-----PASVDKVLGQPHHELDSK 89
Query: 174 KIEAK---------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQ 224
I+ K K ++ KIFVGGLS E++K +F QFG + + + +DK+ ++
Sbjct: 90 TIDPKVAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNR 149
Query: 225 RKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE--PFGVRG 271
+ F F+TFE+E VV + + +IN+K V+ KKA PK P G RG
Sbjct: 150 HRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMFPPGTRG 198
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 68/133 (51%), Gaps = 19/133 (14%)
Query: 58 SFSENCLLEDSIGKPLTVSCSHHYYLFDQILRTHFFYIMEAKNKMVSHPGIV-------H 110
+F++ ++ +G+P H+ L + + + A+ KMV+ + +
Sbjct: 68 TFADPASVDKVLGQP-------HHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSAN 120
Query: 111 KITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVI 170
+ E++K++F ++G++E+ L D T R RGF F+ F++ + +EK V H I
Sbjct: 121 TVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEK-----VCEIHFHEI 175
Query: 171 NNKKIEAKKAKAK 183
NNK +E KKA+ K
Sbjct: 176 NNKMVECKKAQPK 188
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 49/88 (55%)
Query: 176 EAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEH 235
A ++ GK+F+GGLS + + ++ +F++FG I E + D + + + F F+TF
Sbjct: 12 SANDSQHDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFAD 71
Query: 236 ESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ V +L P +++ K +D K A P+
Sbjct: 72 PASVDKVLGQPHHELDSKTIDPKVAFPR 99
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 29/43 (67%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+ L+++FSK+GEI + DP T RSRGF F+ F D S++K
Sbjct: 35 DSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDK 77
Score = 47.4 bits (111), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 61/115 (53%), Gaps = 16/115 (13%)
Query: 552 SFSENCLLEDSIGKPLTVSCSHYHYLFDQNLRTHYFYIVEAKNKMVSHPGIV-------D 604
+F++ ++ +G+P +H L + + + A+ KMV+ + +
Sbjct: 68 TFADPASVDKVLGQP-------HHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSAN 120
Query: 605 KITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFY 659
+ E++K++F ++G++E+ L D T R RGF F+ F++ + +EK V +++F+
Sbjct: 121 TVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEK--VCEIHFH 173
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 35/56 (62%), Gaps = 2/56 (3%)
Query: 452 YDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE--PFGVRG 505
+DK+ ++ + F F+TFE+E VV + + +IN+K V+ KKA PK P G RG
Sbjct: 143 FDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMFPPGTRG 198
>gi|432901707|ref|XP_004076907.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B-like
[Oryzias latipes]
Length = 279
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/134 (41%), Positives = 87/134 (64%), Gaps = 9/134 (6%)
Query: 115 ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNKK 174
+LK++FSK+GE+ + T+K D NTGRSRGF F++FKD+ S++K V+ + H ++ ++
Sbjct: 71 DLKDYFSKFGEVSDCTIKMDSNTGRSRGFGFVLFKDSSSVDK-----VLEQKEHRLDGRQ 125
Query: 175 IEAKKAKAKSG----KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCF 230
I+ K+A A KIFVGGL+PE +E I+ +F FG I E+P D +R+ F F
Sbjct: 126 IDPKRAMAMKKEAVRKIFVGGLNPEATEEAIREYFGAFGEIETIELPIDPKSKKRRGFIF 185
Query: 231 ITFEHESVVIDLLK 244
IT++ E+ V L+
Sbjct: 186 ITYKDEASVKKCLE 199
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 38/47 (80%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D ++LK++FSK+GE+ + T+K D NTGRSRGF F++FKD+ S++K
Sbjct: 66 DTSKKDLKDYFSKFGEVSDCTIKMDSNTGRSRGFGFVLFKDSSSVDK 112
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 55/87 (63%)
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
KI+A K + +GK+FVGGLS + +++K +F++FG + + + D + + + F F+ F
Sbjct: 45 KIDASKGEDDAGKMFVGGLSWDTSKKDLKDYFSKFGEVSDCTIKMDSNTGRSRGFGFVLF 104
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKA 260
+ S V +L+ + +++ +++D K+A
Sbjct: 105 KDSSSVDKVLEQKEHRLDGRQIDPKRA 131
Score = 45.4 bits (106), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
G+ + TEE ++E+F +GEIE + L DP + + RGF FI +KD S++K
Sbjct: 146 GLNPEATEEAIREYFGAFGEIETIELPIDPKSKKRRGFIFITYKDEASVKK 196
>gi|195442400|ref|XP_002068946.1| GK18043 [Drosophila willistoni]
gi|194165031|gb|EDW79932.1| GK18043 [Drosophila willistoni]
Length = 386
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 93/159 (58%), Gaps = 14/159 (8%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
E L+++F +YG+I + DP T RSRGF F+ F D S++K V+ +G H ++ K
Sbjct: 57 ESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVDK-----VLTQGTHELDGK 111
Query: 174 KIEAK---------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQ 224
K++ K K ++ KIFVGGLS E++K++F QFG I + + +DK ++
Sbjct: 112 KVDPKVAFPRRAHPKMVTRTKKIFVGGLSAPTTLEDVKSYFEQFGPIEDAMLMFDKQTNR 171
Query: 225 RKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ F F+TF+ E VV + + +IN+K V+ KKA PK
Sbjct: 172 HRGFGFVTFQSEDVVDKVCEIHFHEINNKMVECKKAQPK 210
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 46/79 (58%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GK+F+GGLS + E ++ +F ++G+I E + D + + + F F+TF + V +L
Sbjct: 43 GKMFIGGLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVDKVLT 102
Query: 245 NPKQKINDKEVDVKKATPK 263
+++ K+VD K A P+
Sbjct: 103 QGTHELDGKKVDPKVAFPR 121
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 28/43 (65%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
E L+++F +YG+I + DP T RSRGF F+ F D S++K
Sbjct: 57 ESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVDK 99
>gi|386766504|ref|NP_001247304.1| musashi, isoform D [Drosophila melanogaster]
gi|383292950|gb|AFH06621.1| musashi, isoform D [Drosophila melanogaster]
Length = 605
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/159 (39%), Positives = 95/159 (59%), Gaps = 13/159 (8%)
Query: 113 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINN 172
+++LKE+F+ +G + +V + DP T RSRGF FI F+ E +VE V+ H ++
Sbjct: 187 SDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQ-----EPCTVEKVLKVPIHTLDG 241
Query: 173 KKIEAKKAKAK--------SGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQ 224
KKI+ K A K + KIFVGG+S + EE+KA+F+QFG + ET M D+ +
Sbjct: 242 KKIDPKHATPKNRPRQANKTKKIFVGGVSQDTSAEEVKAYFSQFGPVEETVMLMDQQTKR 301
Query: 225 RKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ F F+TFE+E VV + + I +K+V+ KKA PK
Sbjct: 302 HRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPK 340
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 47/82 (57%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GK+FVGGLS + +++K +F FG + + + D + + F FITF+ V +LK
Sbjct: 174 GKLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVEKVLK 233
Query: 245 NPKQKINDKEVDVKKATPKPEP 266
P ++ K++D K ATPK P
Sbjct: 234 VPIHTLDGKKIDPKHATPKNRP 255
Score = 47.0 bits (110), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 32/44 (72%)
Query: 607 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+++LKE+F+ +G + +V + DP T RSRGF FI F++ ++EK
Sbjct: 187 SDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVEK 230
Score = 43.9 bits (102), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFYS 660
D EE+K +FS++G +E + D T R RGF F+ F++ + +++ V +++F++
Sbjct: 272 DTSAEEVKAYFSQFGPVEETVMLMDQQTKRHRGFGFVTFENEDVVDR--VCEIHFHT 326
>gi|395863183|ref|XP_003803782.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein A/B-like, partial [Otolemur garnettii]
Length = 482
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/173 (38%), Positives = 100/173 (57%), Gaps = 14/173 (8%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++LK++F+K+GE + TLK DPNTG SRGF FI+F+D ASVE V+ + H ++
Sbjct: 161 KDLKDYFTKFGENVDCTLKMDPNTGXSRGFGFILFRDA-----ASVEKVLDQKEHRLDGP 215
Query: 174 KIEAKKAKAKSGK---------IFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQ 224
I+ KKA A K + VGGL+PE +E+I+ +F FG I E+P D ++
Sbjct: 216 VIDPKKAMAAMKKDPVKRIFVCVCVGGLNPEATEEKIREYFGDFGEIEAIELPMDPKLNK 275
Query: 225 RKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGVRGGRGGRG 277
R +F FITF+ E V +L+ I+ + +++ A PK + G GGRG
Sbjct: 276 RXSFVFITFKEEEPVKKVLEKKFHIISGSKCEIEVAQPKDVYQQQQYGSGGRG 328
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 36/47 (76%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D ++LK++F+K+GE + TLK DPNTG SRGF FI+F+D S+EK
Sbjct: 157 DISKKDLKDYFTKFGENVDCTLKMDPNTGXSRGFGFILFRDAASVEK 203
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 48/87 (55%)
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
+I K + +GK+FVGGLS ++ +++K +F +FG ++ + D + + F FI F
Sbjct: 136 QINTSKNEEDAGKMFVGGLSWDISKKDLKDYFTKFGENVDCTLKMDPNTGXSRGFGFILF 195
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKA 260
+ V +L + +++ +D KKA
Sbjct: 196 RDAASVEKVLDQKEHRLDGPVIDPKKA 222
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
G+ + TEE ++E+F +GEIE + L DP + F FI FK+ E ++K
Sbjct: 242 GLNPEATEEKIREYFGDFGEIEAIELPMDPKLNKRXSFVFITFKEEEPVKK 292
>gi|442621132|ref|NP_001262959.1| musashi, isoform E [Drosophila melanogaster]
gi|440217892|gb|AGB96339.1| musashi, isoform E [Drosophila melanogaster]
Length = 618
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/159 (39%), Positives = 95/159 (59%), Gaps = 13/159 (8%)
Query: 113 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINN 172
+++LKE+F+ +G + +V + DP T RSRGF FI F+ E +VE V+ H ++
Sbjct: 200 SDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQ-----EPCTVEKVLKVPIHTLDG 254
Query: 173 KKIEAKKAKAK--------SGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQ 224
KKI+ K A K + KIFVGG+S + EE+KA+F+QFG + ET M D+ +
Sbjct: 255 KKIDPKHATPKNRPRQANKTKKIFVGGVSQDTSAEEVKAYFSQFGPVEETVMLMDQQTKR 314
Query: 225 RKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ F F+TFE+E VV + + I +K+V+ KKA PK
Sbjct: 315 HRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPK 353
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 47/82 (57%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GK+FVGGLS + +++K +F FG + + + D + + F FITF+ V +LK
Sbjct: 187 GKLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVEKVLK 246
Query: 245 NPKQKINDKEVDVKKATPKPEP 266
P ++ K++D K ATPK P
Sbjct: 247 VPIHTLDGKKIDPKHATPKNRP 268
Score = 47.0 bits (110), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 32/44 (72%)
Query: 607 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+++LKE+F+ +G + +V + DP T RSRGF FI F++ ++EK
Sbjct: 200 SDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVEK 243
Score = 43.5 bits (101), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFYS 660
D EE+K +FS++G +E + D T R RGF F+ F++ + +++ V +++F++
Sbjct: 285 DTSAEEVKAYFSQFGPVEETVMLMDQQTKRHRGFGFVTFENEDVVDR--VCEIHFHT 339
>gi|221220742|gb|ACM09032.1| Heterogeneous nuclear ribonucleoprotein A/B [Salmo salar]
Length = 336
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/161 (40%), Positives = 96/161 (59%), Gaps = 17/161 (10%)
Query: 115 ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNKK 174
+LK++FSK+GE+ + T+K D NTGRSRGF FI+FK E SV+ V+ + H ++ ++
Sbjct: 97 DLKDYFSKFGEVTDCTIKMDSNTGRSRGFGFILFK-----EAGSVDKVLEQKEHRLDGRQ 151
Query: 175 IEAKKA----KAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCF 230
I+ KKA K + KIFVGGL+PE +E I+ +F FG I E+P D +R+ F F
Sbjct: 152 IDPKKAMAMKKEPAKKIFVGGLNPEATEETIREYFGTFGEIESIELPVDLKFKKRRGFIF 211
Query: 231 ITFEHESVVIDLLKNPKQKI------NDKE--VDVKKATPK 263
ITF+ E+ V L+ + N KE ++K A PK
Sbjct: 212 ITFKEEATVKKCLEKKFHNVCGTKVTNGKEGLCEIKIAQPK 252
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 64/113 (56%), Gaps = 2/113 (1%)
Query: 155 EKASVEDVIAEGNHVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIET 214
E A VE+ + + N +I A K + +GK+FVGGLS + +++K +F++FG + +
Sbjct: 53 EPAVVEEGVTQ-NGAAEGGQINASKGEDDAGKMFVGGLSWDTSKKDLKDYFSKFGEVTDC 111
Query: 215 EMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATP-KPEP 266
+ D + + + F FI F+ V +L+ + +++ +++D KKA K EP
Sbjct: 112 TIKMDSNTGRSRGFGFILFKEAGSVDKVLEQKEHRLDGRQIDPKKAMAMKKEP 164
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 37/47 (78%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D ++LK++FSK+GE+ + T+K D NTGRSRGF FI+FK+ S++K
Sbjct: 92 DTSKKDLKDYFSKFGEVTDCTIKMDSNTGRSRGFGFILFKEAGSVDK 138
Score = 38.9 bits (89), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
G+ + TEE ++E+F +GEIE++ L D + RGF FI FK+ +++K
Sbjct: 172 GLNPEATEETIREYFGTFGEIESIELPVDLKFKKRRGFIFITFKEEATVKKC 223
>gi|395845801|ref|XP_003795610.1| PREDICTED: RNA-binding protein Musashi homolog 2 [Otolemur
garnettii]
Length = 324
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/169 (37%), Positives = 98/169 (57%), Gaps = 16/169 (9%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+ L+++FSK+GEI + DP T RSRGF F+ F D ASV+ V+ + +H +++K
Sbjct: 13 DSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFAD-----PASVDKVLGQPHHELDSK 67
Query: 174 KIEAK---------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQ 224
I+ K K ++ KIFVGGLS E++K +F QFG + + + +DK+ ++
Sbjct: 68 TIDPKVAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNR 127
Query: 225 RKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE--PFGVRG 271
+ F F+TFE E VV + + +IN+K V+ KKA PK P G RG
Sbjct: 128 HRGFGFVTFESEDVVEKVCEIHFHEINNKMVECKKAQPKEVMFPPGTRG 176
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 67/133 (50%), Gaps = 19/133 (14%)
Query: 58 SFSENCLLEDSIGKPLTVSCSHHYYLFDQILRTHFFYIMEAKNKMVSHPGIV-------H 110
+F++ ++ +G+P H+ L + + + A+ KMV+ + +
Sbjct: 46 TFADPASVDKVLGQP-------HHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSAN 98
Query: 111 KITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVI 170
+ E++K++F ++G++E+ L D T R RGF F+ F+ + +EK V H I
Sbjct: 99 TVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFESEDVVEK-----VCEIHFHEI 153
Query: 171 NNKKIEAKKAKAK 183
NNK +E KKA+ K
Sbjct: 154 NNKMVECKKAQPK 166
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 44/77 (57%)
Query: 187 IFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNP 246
+F+GGLS + + ++ +F++FG I E + D + + + F F+TF + V +L P
Sbjct: 1 MFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQP 60
Query: 247 KQKINDKEVDVKKATPK 263
+++ K +D K A P+
Sbjct: 61 HHELDSKTIDPKVAFPR 77
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 29/43 (67%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+ L+++FSK+GEI + DP T RSRGF F+ F D S++K
Sbjct: 13 DSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDK 55
Score = 46.6 bits (109), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 60/115 (52%), Gaps = 16/115 (13%)
Query: 552 SFSENCLLEDSIGKPLTVSCSHYHYLFDQNLRTHYFYIVEAKNKMVSHPGIV-------D 604
+F++ ++ +G+P +H L + + + A+ KMV+ + +
Sbjct: 46 TFADPASVDKVLGQP-------HHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSAN 98
Query: 605 KITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFY 659
+ E++K++F ++G++E+ L D T R RGF F+ F+ + +EK V +++F+
Sbjct: 99 TVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFESEDVVEK--VCEIHFH 151
Score = 40.4 bits (93), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 34/56 (60%), Gaps = 2/56 (3%)
Query: 452 YDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE--PFGVRG 505
+DK+ ++ + F F+TFE E VV + + +IN+K V+ KKA PK P G RG
Sbjct: 121 FDKTTNRHRGFGFVTFESEDVVEKVCEIHFHEINNKMVECKKAQPKEVMFPPGTRG 176
>gi|224114443|ref|XP_002316761.1| predicted protein [Populus trichocarpa]
gi|222859826|gb|EEE97373.1| predicted protein [Populus trichocarpa]
Length = 478
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/171 (36%), Positives = 91/171 (53%), Gaps = 27/171 (15%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
E LKE+FSKYGE+ + D TGR+RGF F+VF D E+ +E HVI+ +
Sbjct: 20 ERLKEYFSKYGEVVEAVIMRDRATGRARGFGFVVFADLTVAERVIME------KHVIDGR 73
Query: 174 KIEAKKA---------------------KAKSGKIFVGGLSPEMKDEEIKAHFAQFGNII 212
+EAKKA ++ KIFVGGL+ + + E K +F Q+G II
Sbjct: 74 TVEAKKAVPRDDQHILSRSISNIHGSPGPGRTKKIFVGGLASTVTENEFKKYFEQYGIII 133
Query: 213 ETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ + YD + + + F FIT++ E V +L ++N K V+VK+A PK
Sbjct: 134 DVVVMYDHNTQRPRGFGFITYDSEEAVDRVLHKTFHELNGKMVEVKRAVPK 184
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GK+F+GG+S + +E +K +F+++G ++E + D++ + + F F+ F +V ++
Sbjct: 6 GKLFIGGISWDTDEERLKEYFSKYGEVVEAVIMRDRATGRARGFGFVVFADLTVAERVIM 65
Query: 245 NPKQKINDKEVDVKKATPK 263
K I+ + V+ KKA P+
Sbjct: 66 E-KHVIDGRTVEAKKAVPR 83
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 31/51 (60%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVE 654
D E LKE+FSKYGE+ + D TGR+RGF F+VF D E+ +E
Sbjct: 16 DTDEERLKEYFSKYGEVVEAVIMRDRATGRARGFGFVVFADLTVAERVIME 66
Score = 42.7 bits (99), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 592 AKNKMVSHPGIVDKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+ K + G+ +TE E K++F +YG I +V + D NT R RGF FI + E++++
Sbjct: 103 GRTKKIFVGGLASTVTENEFKKYFEQYGIIIDVVVMYDHNTQRPRGFGFITYDSEEAVDR 162
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 31/53 (58%)
Query: 445 IIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 497
II+ + YD + + + F FIT++ E V +L ++N K V+VK+A PK
Sbjct: 132 IIDVVVMYDHNTQRPRGFGFITYDSEEAVDRVLHKTFHELNGKMVEVKRAVPK 184
>gi|121715226|ref|XP_001275222.1| heterogeneous nuclear ribonucleoprotein HRP1 [Aspergillus clavatus
NRRL 1]
gi|119403379|gb|EAW13796.1| heterogeneous nuclear ribonucleoprotein HRP1 [Aspergillus clavatus
NRRL 1]
Length = 466
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/150 (36%), Positives = 92/150 (61%), Gaps = 2/150 (1%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+ LK++FS++GE++ T+ D TGRSRGF F+ FKD +++ V++ +G +I+ K
Sbjct: 13 QSLKDYFSQFGEVQECTVMRDSATGRSRGFGFLTFKDPKTVNTVMVKEHYLDG-KIIDPK 71
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
+ + + K+ KIFVGG+S E ++E K F QFG +++ + DK + + F F+TF
Sbjct: 72 RAIPRDEQEKTSKIFVGGVSQEATEQEFKGFFMQFGRVVDATLMIDKDTGRPRGFGFVTF 131
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ E+ V + L P I K ++VKKA P+
Sbjct: 132 DSEAAVENALSRPL-AICGKPIEVKKAQPR 160
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 35/51 (68%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYF 658
+ LK++FS++GE++ T+ D TGRSRGF F+ FKD +++ V++ Y
Sbjct: 13 QSLKDYFSQFGEVQECTVMRDSATGRSRGFGFLTFKDPKTVNTVMVKEHYL 63
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 187 IFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNP 246
+F+GGL+ E D+ +K +F+QFG + E + D + + + F F+TF+ V ++
Sbjct: 1 MFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDSATGRSRGFGFLTFKDPKTVNTVMVK- 59
Query: 247 KQKINDKEVDVKKATPKPE 265
+ ++ K +D K+A P+ E
Sbjct: 60 EHYLDGKIIDPKRAIPRDE 78
Score = 42.4 bits (98), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 601 GIVDKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
G+ + TE E K F ++G + + TL D +TGR RGF F+ F ++E A
Sbjct: 89 GVSQEATEQEFKGFFMQFGRVVDATLMIDKDTGRPRGFGFVTFDSEAAVENA 140
>gi|388329663|gb|AFK29218.1| musashi-PB, partial [Drosophila buzzatii]
Length = 636
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/159 (39%), Positives = 95/159 (59%), Gaps = 13/159 (8%)
Query: 113 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINN 172
+E+LKE+F+ +G + +V + DP T RSRGF FI F+ E +V+ V+ H ++
Sbjct: 199 SEKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQ-----EPCTVDKVLKVPIHTLDG 253
Query: 173 KKIEAKKAKAK--------SGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQ 224
KKI+ K A K + KIFVGG+S + EE+KA+F+QFG + ET M D+ +
Sbjct: 254 KKIDPKHATPKNRPRQANKTKKIFVGGVSQDTSAEEVKAYFSQFGAVEETVMLMDQQTKR 313
Query: 225 RKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ F F+TFE+E VV + + I +K+V+ KKA PK
Sbjct: 314 HRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPK 352
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 47/82 (57%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GK+FVGGLS + E++K +F FG + + + D + + F FITF+ V +LK
Sbjct: 186 GKLFVGGLSWQTSSEKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVDKVLK 245
Query: 245 NPKQKINDKEVDVKKATPKPEP 266
P ++ K++D K ATPK P
Sbjct: 246 VPIHTLDGKKIDPKHATPKNRP 267
Score = 46.6 bits (109), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 32/44 (72%)
Query: 607 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+E+LKE+F+ +G + +V + DP T RSRGF FI F++ +++K
Sbjct: 199 SEKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVDK 242
Score = 43.9 bits (102), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFYS 660
D EE+K +FS++G +E + D T R RGF F+ F++ + +++ V +++F++
Sbjct: 284 DTSAEEVKAYFSQFGAVEETVMLMDQQTKRHRGFGFVTFENEDVVDR--VCEIHFHT 338
>gi|417398472|gb|JAA46269.1| Putative rna-binding protein musashi/mrna cleavage and
polyadenylation factor i complex subunit hrp1 [Desmodus
rotundus]
Length = 293
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/169 (37%), Positives = 99/169 (58%), Gaps = 16/169 (9%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+ L+++FSK+GEI + DP T RSRGF F+ F D ASV+ V+ + +H +++K
Sbjct: 35 DSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADP-----ASVDKVLGQPHHELDSK 89
Query: 174 KIEAK---------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQ 224
I+ K K ++ KIFVGGLS E++K +F QFG + + + +DK+ ++
Sbjct: 90 TIDPKVAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNR 149
Query: 225 RKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE--PFGVRG 271
+ F F+TFE+E VV + + +IN+K V+ KKA PK P G RG
Sbjct: 150 HRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMFPPGTRG 198
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 68/133 (51%), Gaps = 19/133 (14%)
Query: 58 SFSENCLLEDSIGKPLTVSCSHHYYLFDQILRTHFFYIMEAKNKMVSHPGIV-------H 110
+F++ ++ +G+P H+ L + + + A+ KMV+ + +
Sbjct: 68 TFADPASVDKVLGQP-------HHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSAN 120
Query: 111 KITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVI 170
+ E++K++F ++G++E+ L D T R RGF F+ F++ + +EK V H I
Sbjct: 121 TVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEK-----VCEIHFHEI 175
Query: 171 NNKKIEAKKAKAK 183
NNK +E KKA+ K
Sbjct: 176 NNKMVECKKAQPK 188
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 49/87 (56%)
Query: 177 AKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHE 236
A ++ GK+F+GGLS + + ++ +F++FG I E + D + + + F F+TF
Sbjct: 13 ANDSQHDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADP 72
Query: 237 SVVIDLLKNPKQKINDKEVDVKKATPK 263
+ V +L P +++ K +D K A P+
Sbjct: 73 ASVDKVLGQPHHELDSKTIDPKVAFPR 99
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 29/43 (67%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+ L+++FSK+GEI + DP T RSRGF F+ F D S++K
Sbjct: 35 DSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDK 77
Score = 47.4 bits (111), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 61/115 (53%), Gaps = 16/115 (13%)
Query: 552 SFSENCLLEDSIGKPLTVSCSHYHYLFDQNLRTHYFYIVEAKNKMVSHPGIV-------D 604
+F++ ++ +G+P +H L + + + A+ KMV+ + +
Sbjct: 68 TFADPASVDKVLGQP-------HHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSAN 120
Query: 605 KITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFY 659
+ E++K++F ++G++E+ L D T R RGF F+ F++ + +EK V +++F+
Sbjct: 121 TVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEK--VCEIHFH 173
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 35/56 (62%), Gaps = 2/56 (3%)
Query: 452 YDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE--PFGVRG 505
+DK+ ++ + F F+TFE+E VV + + +IN+K V+ KKA PK P G RG
Sbjct: 143 FDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMFPPGTRG 198
>gi|388329666|gb|AFK29221.1| musashi-PA [Drosophila buzzatii]
Length = 671
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/159 (39%), Positives = 95/159 (59%), Gaps = 13/159 (8%)
Query: 113 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINN 172
+E+LKE+F+ +G + +V + DP T RSRGF FI F+ E +V+ V+ H ++
Sbjct: 234 SEKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQ-----EPCTVDKVLKVPIHTLDG 288
Query: 173 KKIEAKKAKAK--------SGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQ 224
KKI+ K A K + KIFVGG+S + EE+KA+F+QFG + ET M D+ +
Sbjct: 289 KKIDPKHATPKNRPRQANKTKKIFVGGVSQDTSAEEVKAYFSQFGAVEETVMLMDQQTKR 348
Query: 225 RKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ F F+TFE+E VV + + I +K+V+ KKA PK
Sbjct: 349 HRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPK 387
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 47/82 (57%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GK+FVGGLS + E++K +F FG + + + D + + F FITF+ V +LK
Sbjct: 221 GKLFVGGLSWQTSSEKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVDKVLK 280
Query: 245 NPKQKINDKEVDVKKATPKPEP 266
P ++ K++D K ATPK P
Sbjct: 281 VPIHTLDGKKIDPKHATPKNRP 302
Score = 46.6 bits (109), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 32/44 (72%)
Query: 607 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+E+LKE+F+ +G + +V + DP T RSRGF FI F++ +++K
Sbjct: 234 SEKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVDK 277
Score = 43.9 bits (102), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFYS 660
D EE+K +FS++G +E + D T R RGF F+ F++ + +++ V +++F++
Sbjct: 319 DTSAEEVKAYFSQFGAVEETVMLMDQQTKRHRGFGFVTFENEDVVDR--VCEIHFHT 373
>gi|119480409|ref|XP_001260233.1| heterogeneous nuclear ribonucleoprotein HRP1 [Neosartorya fischeri
NRRL 181]
gi|119408387|gb|EAW18336.1| heterogeneous nuclear ribonucleoprotein HRP1 [Neosartorya fischeri
NRRL 181]
Length = 462
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 91/150 (60%), Gaps = 2/150 (1%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+ LK++FS++GE++ T+ D TGRSRGF F+ FKD +++ V++ +G +I+ K
Sbjct: 24 QSLKDYFSQFGEVQECTVMRDSATGRSRGFGFLTFKDPKTVNTVMVKEHYLDG-KIIDPK 82
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
+ + + K+ KIFVGG+S E ++E K F QFG +I+ + DK + + F F+TF
Sbjct: 83 RAIPRDEQEKTSKIFVGGVSQEATEQEFKEFFTQFGRVIDATLMIDKDTGRPRGFGFVTF 142
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ E+ V L P I K ++VKKA P+
Sbjct: 143 DSEAAVEAALSRPL-AICGKPIEVKKAQPR 171
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 35/51 (68%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYF 658
+ LK++FS++GE++ T+ D TGRSRGF F+ FKD +++ V++ Y
Sbjct: 24 QSLKDYFSQFGEVQECTVMRDSATGRSRGFGFLTFKDPKTVNTVMVKEHYL 74
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+F+GGL+ E D+ +K +F+QFG + E + D + + + F F+TF+ V ++
Sbjct: 11 KMFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDSATGRSRGFGFLTFKDPKTVNTVMVK 70
Query: 246 PKQKINDKEVDVKKATPKPE 265
+ ++ K +D K+A P+ E
Sbjct: 71 -EHYLDGKIIDPKRAIPRDE 89
Score = 45.8 bits (107), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 601 GIVDKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
G+ + TE E KE F+++G + + TL D +TGR RGF F+ F ++E A
Sbjct: 100 GVSQEATEQEFKEFFTQFGRVIDATLMIDKDTGRPRGFGFVTFDSEAAVEAA 151
>gi|61806598|ref|NP_001013534.1| RNA-binding protein Musashi homolog 1 [Danio rerio]
gi|60688517|gb|AAH90916.1| Musashi homolog 1 (Drosophila) [Danio rerio]
gi|182888902|gb|AAI64361.1| Msi1 protein [Danio rerio]
gi|379056199|dbj|BAL68141.1| RNA-binding protein Musashi homolog 1 Short [Danio rerio]
Length = 330
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/215 (34%), Positives = 115/215 (53%), Gaps = 18/215 (8%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + T+E LK++F K+GE++ + DP T RSRGF F+ F D +A V+ V+A+
Sbjct: 26 GLSWQTTQEGLKDYFCKFGEVKESMVMRDPVTKRSRGFGFVTFVD-----QAGVDKVLAQ 80
Query: 166 GNHVINNKKIEAK---------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEM 216
H +++K I+ K K ++ KIFVGGLS E++K +F QFG + + +
Sbjct: 81 TRHELDSKTIDPKVAFPRRAQPKLVTRTKKIFVGGLSVNTTIEDVKQYFDQFGKVDDAML 140
Query: 217 PYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKP--EPFGVRGGRG 274
+DK+ ++ + F F+TFE+E VV + + +IN+K V+ KKA PK P G GR
Sbjct: 141 MFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMSPTGSSRGRA 200
Query: 275 GRGGRGGRGGRMAGGYGGYGGY-GGGYGGILYKPL 308
G + G GY G+ Y G Y L
Sbjct: 201 RVMPYGMDAFMLGIGMLGYPGFQATTYAGRSYTSL 235
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 45/78 (57%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+F+GGLS + E +K +F +FG + E+ + D + + F F+TF ++ V +L
Sbjct: 21 KMFIGGLSWQTTQEGLKDYFCKFGEVKESMVMRDPVTKRSRGFGFVTFVDQAGVDKVLAQ 80
Query: 246 PKQKINDKEVDVKKATPK 263
+ +++ K +D K A P+
Sbjct: 81 TRHELDSKTIDPKVAFPR 98
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
G+ + T+E LK++F K+GE++ + DP T RSRGF F+ F D ++K
Sbjct: 26 GLSWQTTQEGLKDYFCKFGEVKESMVMRDPVTKRSRGFGFVTFVDQAGVDK 76
Score = 43.5 bits (101), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 38/57 (66%), Gaps = 2/57 (3%)
Query: 603 VDKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFY 659
V+ E++K++F ++G++++ L D T R RGF F+ F++ + +EK V +++F+
Sbjct: 118 VNTTIEDVKQYFDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEK--VCEIHFH 172
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 452 YDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKP--EPFGVRGGRGG 509
+DK+ ++ + F F+TFE+E VV + + +IN+K V+ KKA PK P G GR
Sbjct: 142 FDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMSPTGSSRGRAR 201
Query: 510 RGGRGGRGGRMAGGYGGYGGY 530
G + G GY G+
Sbjct: 202 VMPYGMDAFMLGIGMLGYPGF 222
>gi|432899442|ref|XP_004076560.1| PREDICTED: RNA-binding protein Musashi homolog 2-like isoform 3
[Oryzias latipes]
Length = 328
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/169 (38%), Positives = 96/169 (56%), Gaps = 16/169 (9%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+ L+++FSK+GEI + DP T RSRGF F+ F D ASV+ V+A+ H + K
Sbjct: 35 DSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFTDA-----ASVDKVLAQQKHSVLIK 89
Query: 174 KIEAK---------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQ 224
I+ K K ++ KIFVGGLS E++K +F QFG + + + +DK+ ++
Sbjct: 90 TIDPKVAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVDDAMLMFDKTTNR 149
Query: 225 RKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE--PFGVRG 271
+ F FITFE E +V + + +IN+K V+ KKA PK P G RG
Sbjct: 150 HRGFGFITFESEDIVEKVCEIHFHEINNKMVECKKAQPKEVMFPPGTRG 198
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 44/75 (58%), Gaps = 5/75 (6%)
Query: 109 VHKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNH 168
+ + E++K++F ++G++++ L D T R RGF FI F+ + +EK V H
Sbjct: 119 ANTVVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFITFESEDIVEK-----VCEIHFH 173
Query: 169 VINNKKIEAKKAKAK 183
INNK +E KKA+ K
Sbjct: 174 EINNKMVECKKAQPK 188
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 44/79 (55%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GK+F+GGLS + + ++ +F++FG I E + D + + + F F+TF + V +L
Sbjct: 21 GKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFTDAASVDKVLA 80
Query: 245 NPKQKINDKEVDVKKATPK 263
K + K +D K A P+
Sbjct: 81 QQKHSVLIKTIDPKVAFPR 99
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 29/43 (67%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+ L+++FSK+GEI + DP T RSRGF F+ F D S++K
Sbjct: 35 DSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFTDAASVDK 77
Score = 43.5 bits (101), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 37/57 (64%), Gaps = 2/57 (3%)
Query: 603 VDKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFY 659
+ + E++K++F ++G++++ L D T R RGF FI F+ + +EK V +++F+
Sbjct: 119 ANTVVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFITFESEDIVEK--VCEIHFH 173
Score = 40.4 bits (93), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 34/56 (60%), Gaps = 2/56 (3%)
Query: 452 YDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE--PFGVRG 505
+DK+ ++ + F FITFE E +V + + +IN+K V+ KKA PK P G RG
Sbjct: 143 FDKTTNRHRGFGFITFESEDIVEKVCEIHFHEINNKMVECKKAQPKEVMFPPGTRG 198
>gi|154799958|dbj|BAF75024.1| Musashi-1c [Cynops pyrrhogaster]
Length = 342
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/167 (36%), Positives = 99/167 (59%), Gaps = 15/167 (8%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + T+E L+E+F +YGE++ + DP T RSRGF F+ F D +A V+ V+A+
Sbjct: 26 GLSWQTTQEGLREYFGQYGEVKECLVMRDPLTKRSRGFGFVTFMD-----QAGVDKVLAQ 80
Query: 166 GNHVINNKKIEAK---------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEM 216
H +++K I+ K K ++ KIFVGGLS E++K +F QFG + + +
Sbjct: 81 SRHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDAML 140
Query: 217 PYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+DK+ ++ + F F+TFE E +V + + +IN+K V+ KKA PK
Sbjct: 141 MFDKTTNRHRGFGFVTFEVEDIVEKVCEIHFHEINNKMVECKKAQPK 187
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 44/78 (56%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+F+GGLS + E ++ +F Q+G + E + D + + F F+TF ++ V +L
Sbjct: 21 KMFIGGLSWQTTQEGLREYFGQYGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 80
Query: 246 PKQKINDKEVDVKKATPK 263
+ +++ K +D K A P+
Sbjct: 81 SRHELDSKTIDPKVAFPR 98
Score = 46.6 bits (109), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
G+ + T+E L+E+F +YGE++ + DP T RSRGF F+ F D ++K
Sbjct: 26 GLSWQTTQEGLREYFGQYGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDK 76
Score = 42.4 bits (98), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 37/57 (64%), Gaps = 2/57 (3%)
Query: 603 VDKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFY 659
V+ E++K++F ++G++++ L D T R RGF F+ F+ + +EK V +++F+
Sbjct: 118 VNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFEVEDIVEK--VCEIHFH 172
Score = 39.3 bits (90), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 30/46 (65%)
Query: 452 YDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 497
+DK+ ++ + F F+TFE E +V + + +IN+K V+ KKA PK
Sbjct: 142 FDKTTNRHRGFGFVTFEVEDIVEKVCEIHFHEINNKMVECKKAQPK 187
>gi|432899438|ref|XP_004076558.1| PREDICTED: RNA-binding protein Musashi homolog 2-like isoform 1
[Oryzias latipes]
Length = 328
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/169 (38%), Positives = 96/169 (56%), Gaps = 16/169 (9%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+ L+++FSK+GEI + DP T RSRGF F+ F D ASV+ V+A+ H + K
Sbjct: 35 DSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFTDA-----ASVDKVLAQQKHSVLIK 89
Query: 174 KIEAK---------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQ 224
I+ K K ++ KIFVGGLS E++K +F QFG + + + +DK+ ++
Sbjct: 90 TIDPKVAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVDDAMLMFDKTTNR 149
Query: 225 RKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE--PFGVRG 271
+ F FITFE E +V + + +IN+K V+ KKA PK P G RG
Sbjct: 150 HRGFGFITFESEDIVEKVCEIHFHEINNKMVECKKAQPKEVMFPPGTRG 198
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 44/75 (58%), Gaps = 5/75 (6%)
Query: 109 VHKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNH 168
+ + E++K++F ++G++++ L D T R RGF FI F+ + +EK V H
Sbjct: 119 ANTVVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFITFESEDIVEK-----VCEIHFH 173
Query: 169 VINNKKIEAKKAKAK 183
INNK +E KKA+ K
Sbjct: 174 EINNKMVECKKAQPK 188
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 44/79 (55%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GK+F+GGLS + + ++ +F++FG I E + D + + + F F+TF + V +L
Sbjct: 21 GKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFTDAASVDKVLA 80
Query: 245 NPKQKINDKEVDVKKATPK 263
K + K +D K A P+
Sbjct: 81 QQKHSVLIKTIDPKVAFPR 99
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 29/43 (67%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+ L+++FSK+GEI + DP T RSRGF F+ F D S++K
Sbjct: 35 DSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFTDAASVDK 77
Score = 43.5 bits (101), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 37/57 (64%), Gaps = 2/57 (3%)
Query: 603 VDKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFY 659
+ + E++K++F ++G++++ L D T R RGF FI F+ + +EK V +++F+
Sbjct: 119 ANTVVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFITFESEDIVEK--VCEIHFH 173
Score = 40.8 bits (94), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 34/56 (60%), Gaps = 2/56 (3%)
Query: 452 YDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE--PFGVRG 505
+DK+ ++ + F FITFE E +V + + +IN+K V+ KKA PK P G RG
Sbjct: 143 FDKTTNRHRGFGFITFESEDIVEKVCEIHFHEINNKMVECKKAQPKEVMFPPGTRG 198
>gi|154799954|dbj|BAF75022.1| Musashi-1a [Cynops pyrrhogaster]
Length = 361
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/167 (36%), Positives = 99/167 (59%), Gaps = 15/167 (8%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + T+E L+E+F +YGE++ + DP T RSRGF F+ F D +A V+ V+A+
Sbjct: 26 GLSWQTTQEGLREYFGQYGEVKECLVMRDPLTKRSRGFGFVTFMD-----QAGVDKVLAQ 80
Query: 166 GNHVINNKKIEAK---------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEM 216
H +++K I+ K K ++ KIFVGGLS E++K +F QFG + + +
Sbjct: 81 SRHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDAML 140
Query: 217 PYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+DK+ ++ + F F+TFE E +V + + +IN+K V+ KKA PK
Sbjct: 141 MFDKTTNRHRGFGFVTFEVEDIVEKVCEIHFHEINNKMVECKKAQPK 187
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 44/78 (56%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+F+GGLS + E ++ +F Q+G + E + D + + F F+TF ++ V +L
Sbjct: 21 KMFIGGLSWQTTQEGLREYFGQYGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 80
Query: 246 PKQKINDKEVDVKKATPK 263
+ +++ K +D K A P+
Sbjct: 81 SRHELDSKTIDPKVAFPR 98
Score = 46.6 bits (109), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
G+ + T+E L+E+F +YGE++ + DP T RSRGF F+ F D ++K
Sbjct: 26 GLSWQTTQEGLREYFGQYGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDK 76
Score = 42.4 bits (98), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 37/57 (64%), Gaps = 2/57 (3%)
Query: 603 VDKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFY 659
V+ E++K++F ++G++++ L D T R RGF F+ F+ + +EK V +++F+
Sbjct: 118 VNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFEVEDIVEK--VCEIHFH 172
Score = 39.3 bits (90), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 30/46 (65%)
Query: 452 YDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 497
+DK+ ++ + F F+TFE E +V + + +IN+K V+ KKA PK
Sbjct: 142 FDKTTNRHRGFGFVTFEVEDIVEKVCEIHFHEINNKMVECKKAQPK 187
>gi|432899440|ref|XP_004076559.1| PREDICTED: RNA-binding protein Musashi homolog 2-like isoform 2
[Oryzias latipes]
Length = 347
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/169 (38%), Positives = 96/169 (56%), Gaps = 16/169 (9%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+ L+++FSK+GEI + DP T RSRGF F+ F D ASV+ V+A+ H + K
Sbjct: 35 DSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFTDA-----ASVDKVLAQQKHSVLIK 89
Query: 174 KIEAK---------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQ 224
I+ K K ++ KIFVGGLS E++K +F QFG + + + +DK+ ++
Sbjct: 90 TIDPKVAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVDDAMLMFDKTTNR 149
Query: 225 RKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE--PFGVRG 271
+ F FITFE E +V + + +IN+K V+ KKA PK P G RG
Sbjct: 150 HRGFGFITFESEDIVEKVCEIHFHEINNKMVECKKAQPKEVMFPPGTRG 198
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 44/75 (58%), Gaps = 5/75 (6%)
Query: 109 VHKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNH 168
+ + E++K++F ++G++++ L D T R RGF FI F+ + +EK V H
Sbjct: 119 ANTVVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFITFESEDIVEK-----VCEIHFH 173
Query: 169 VINNKKIEAKKAKAK 183
INNK +E KKA+ K
Sbjct: 174 EINNKMVECKKAQPK 188
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 44/79 (55%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GK+F+GGLS + + ++ +F++FG I E + D + + + F F+TF + V +L
Sbjct: 21 GKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFTDAASVDKVLA 80
Query: 245 NPKQKINDKEVDVKKATPK 263
K + K +D K A P+
Sbjct: 81 QQKHSVLIKTIDPKVAFPR 99
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 29/43 (67%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+ L+++FSK+GEI + DP T RSRGF F+ F D S++K
Sbjct: 35 DSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFTDAASVDK 77
Score = 43.5 bits (101), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 37/57 (64%), Gaps = 2/57 (3%)
Query: 603 VDKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFY 659
+ + E++K++F ++G++++ L D T R RGF FI F+ + +EK V +++F+
Sbjct: 119 ANTVVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFITFESEDIVEK--VCEIHFH 173
Score = 40.4 bits (93), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 34/56 (60%), Gaps = 2/56 (3%)
Query: 452 YDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE--PFGVRG 505
+DK+ ++ + F FITFE E +V + + +IN+K V+ KKA PK P G RG
Sbjct: 143 FDKTTNRHRGFGFITFESEDIVEKVCEIHFHEINNKMVECKKAQPKEVMFPPGTRG 198
>gi|146197797|dbj|BAF57616.1| pRM10 protein [Dugesia japonica]
Length = 325
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/161 (38%), Positives = 97/161 (60%), Gaps = 9/161 (5%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + TEE LK +F +G++ + +K D TG SRGF F+ +SL+K V+
Sbjct: 78 GLSWETTEEDLKNYFETWGKVAHCVIKLDKMTGNSRGFGFVTMDTEDSLKK-----VLEV 132
Query: 166 GNHVINNKKIEAKKAKA---KSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSK 222
H + NKKI+ K AK + KIFVGGLSPE+ +E+IK +F+Q+G++ ++P+D SK
Sbjct: 133 PEHRLKNKKIDPKPAKPTKEPNKKIFVGGLSPEVTEEQIKEYFSQYGSVESVDLPFDTSK 192
Query: 223 SQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+RK + F++F E + + N KQ + + DV+ A PK
Sbjct: 193 GKRKPYVFLSFTTEDAAKNAIINEKQDVLGSKCDVRMAVPK 233
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 56/104 (53%), Gaps = 4/104 (3%)
Query: 167 NHVINNKKIEAKKAKAK----SGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSK 222
NH +N K ++ K S K+FVGGLS E +E++K +F +G + + DK
Sbjct: 50 NHEKSNDKADSINNKVDEDDDSRKLFVGGLSWETTEEDLKNYFETWGKVAHCVIKLDKMT 109
Query: 223 SQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEP 266
+ F F+T + E + +L+ P+ ++ +K++D K A P EP
Sbjct: 110 GNSRGFGFVTMDTEDSLKKVLEVPEHRLKNKKIDPKPAKPTKEP 153
Score = 42.4 bits (98), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 51/95 (53%), Gaps = 4/95 (4%)
Query: 560 EDSIGKPLTVSCSHYHYLFDQNLRTHYFYIVEAKNKMVSHPGIVDKITEE-LKEHFSKYG 618
EDS+ K L V H L ++ + + NK + G+ ++TEE +KE+FS+YG
Sbjct: 123 EDSLKKVLEVP---EHRLKNKKIDPKPAKPTKEPNKKIFVGGLSPEVTEEQIKEYFSQYG 179
Query: 619 EIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASV 653
+E+V L D + G+ + + F+ F ++ + A +
Sbjct: 180 SVESVDLPFDTSKGKRKPYVFLSFTTEDAAKNAII 214
Score = 39.3 bits (90), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 49/107 (45%), Gaps = 15/107 (14%)
Query: 403 LEIPEAFLT--KTTTVPMTTTEH---MVLVTGTDMMHMEVTEAVPME-------IIETEM 450
LE+PE L K P T+ + V G + EVTE E + ++
Sbjct: 130 LEVPEHRLKNKKIDPKPAKPTKEPNKKIFVGG---LSPEVTEEQIKEYFSQYGSVESVDL 186
Query: 451 PYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 497
P+D SK +RK + F++F E + + N KQ + + DV+ A PK
Sbjct: 187 PFDTSKGKRKPYVFLSFTTEDAAKNAIINEKQDVLGSKCDVRMAVPK 233
Score = 38.9 bits (89), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 27/43 (62%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
E+LK +F +G++ + +K D TG SRGF F+ +SL+K
Sbjct: 86 EDLKNYFETWGKVAHCVIKLDKMTGNSRGFGFVTMDTEDSLKK 128
>gi|358336337|dbj|GAA54876.1| heterogeneous nuclear ribonucleoprotein D0 [Clonorchis sinensis]
Length = 395
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 109/203 (53%), Gaps = 13/203 (6%)
Query: 112 ITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVIN 171
I ++L+++FS++G++ +K D TG SRGF F+ + + + K V+ H +N
Sbjct: 10 IVDDLRDYFSRWGKVTQCIIKLDRFTGNSRGFGFVTMESEDCVSK-----VLCVSEHWLN 64
Query: 172 NKKIEAKKAKAKS---GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNF 228
NKKI+ KKAK K+FVGG+ P++ +E+I+ +F+ FG + ++P+D K +RK++
Sbjct: 65 NKKIDPKKAKPSREPLRKVFVGGIDPDVTEEQIREYFSSFGKVESLDLPFDAQKGRRKHY 124
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGVRGGRGGRGG-----RGGRG 283
F++F E+ + +Q+I ++ DV+ A + + + + G G
Sbjct: 125 IFVSFATEAAARKAIALERQEIFGRQCDVRVAVTREQASRQKALKQWYGFFDYAYPGYTF 184
Query: 284 GRMAGGYGGYGGYGGGYGGILYK 306
G A Y GY Y G+ G Y+
Sbjct: 185 GDFANPYSGYDPYVYGFYGYDYQ 207
Score = 40.4 bits (93), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 33/56 (58%)
Query: 606 ITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFYSN 661
I ++L+++FS++G++ +K D TG SRGF F+ + + + K ++ +N
Sbjct: 10 IVDDLRDYFSRWGKVTQCIIKLDRFTGNSRGFGFVTMESEDCVSKVLCVSEHWLNN 65
>gi|310792726|gb|EFQ28187.1| RNA recognition domain-containing protein [Glomerella graminicola
M1.001]
Length = 445
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/190 (33%), Positives = 108/190 (56%), Gaps = 7/190 (3%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+ L+++FS++GE+ T+ D +TGRSRGF F+ F+D +++ V++ +G +I+ K
Sbjct: 13 QSLRDYFSQFGEVVECTVMRDSSTGRSRGFGFLTFRDPKTVNIVMVKEHFLDGK-IIDPK 71
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
+ + + K+ KIFVGG+S E D+E K +FAQFG +++ + DK + + F F+TF
Sbjct: 72 RAIPRDEQEKTSKIFVGGVSQETTDQEFKDYFAQFGRVVDATLMMDKDTGRPRGFGFVTF 131
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKATPK-----PEPFGVRGGRGGRGGRGGRGGRMAG 288
E E+ V D + +I+ K ++VKKA P+ E RGG+ +G + G+
Sbjct: 132 ESEAGV-DACLSTSLEIHGKPIEVKKAQPRGNLREEEEAARRGGKFRKGDDNAQSGQNGM 190
Query: 289 GYGGYGGYGG 298
G GG
Sbjct: 191 GSTQMAAAGG 200
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
Query: 187 IFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNP 246
+F+GGL+ E D+ ++ +F+QFG ++E + D S + + F F+TF + ++++
Sbjct: 1 MFIGGLNWETTDQSLRDYFSQFGEVVECTVMRDSSTGRSRGFGFLTF-RDPKTVNIVMVK 59
Query: 247 KQKINDKEVDVKKATPKPE 265
+ ++ K +D K+A P+ E
Sbjct: 60 EHFLDGKIIDPKRAIPRDE 78
Score = 47.0 bits (110), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 35/51 (68%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYF 658
+ L+++FS++GE+ T+ D +TGRSRGF F+ F+D +++ V++ +
Sbjct: 13 QSLRDYFSQFGEVVECTVMRDSSTGRSRGFGFLTFRDPKTVNIVMVKEHFL 63
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 30/44 (68%), Gaps = 1/44 (2%)
Query: 601 GIVDKIT-EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFK 643
G+ + T +E K++F+++G + + TL D +TGR RGF F+ F+
Sbjct: 89 GVSQETTDQEFKDYFAQFGRVVDATLMMDKDTGRPRGFGFVTFE 132
>gi|156380774|ref|XP_001631942.1| predicted protein [Nematostella vectensis]
gi|156218991|gb|EDO39879.1| predicted protein [Nematostella vectensis]
Length = 186
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/159 (39%), Positives = 95/159 (59%), Gaps = 14/159 (8%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
E L++HF K+GE++ + DP T RSRGF F+ FKD ++ V+ V+ G ++ K
Sbjct: 14 EGLRQHFEKFGELKECVVMRDPVTKRSRGFGFLTFKDPKA-----VDVVLNSGAQELDGK 68
Query: 174 KIEAK-----KAKAK----SGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQ 224
KI+ K +A AK + KIF+GGLS +E++K +F+QFG I ET + +DK+ +
Sbjct: 69 KIDPKLAVPKRAPAKMVTTTKKIFIGGLSTNTSEEDMKKYFSQFGKITETMLMFDKATQR 128
Query: 225 RKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ F F+TFE E+ IN+K+V+VKKA PK
Sbjct: 129 HRGFGFVTFESENSADKACDTQYHLINNKKVEVKKAQPK 167
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 46/81 (56%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+F+GGLS + E ++ HF +FG + E + D + + F F+TF+ V +L +
Sbjct: 1 KMFIGGLSWQTTAEGLRQHFEKFGELKECVVMRDPVTKRSRGFGFLTFKDPKAVDVVLNS 60
Query: 246 PKQKINDKEVDVKKATPKPEP 266
Q+++ K++D K A PK P
Sbjct: 61 GAQELDGKKIDPKLAVPKRAP 81
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 30/42 (71%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLE 649
E L++HF K+GE++ + DP T RSRGF F+ FKD ++++
Sbjct: 14 EGLRQHFEKFGELKECVVMRDPVTKRSRGFGFLTFKDPKAVD 55
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 46/96 (47%), Gaps = 4/96 (4%)
Query: 406 PEAFLTKTTTVPMTTTEHMVLV----TGTDMMHMEVTEAVPMEIIETEMPYDKSKSQRKN 461
P+ + K M TT + + T T M+ + +I ET + +DK+ + +
Sbjct: 72 PKLAVPKRAPAKMVTTTKKIFIGGLSTNTSEEDMKKYFSQFGKITETMLMFDKATQRHRG 131
Query: 462 FCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 497
F F+TFE E+ IN+K+V+VKKA PK
Sbjct: 132 FGFVTFESENSADKACDTQYHLINNKKVEVKKAQPK 167
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 31/54 (57%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFYSN 661
E++K++FS++G+I L D T R RGF F+ F+ S +KA + +N
Sbjct: 103 EDMKKYFSQFGKITETMLMFDKATQRHRGFGFVTFESENSADKACDTQYHLINN 156
>gi|154799956|dbj|BAF75023.1| Musashi-1b [Cynops pyrrhogaster]
Length = 346
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 61/167 (36%), Positives = 99/167 (59%), Gaps = 15/167 (8%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + T+E L+E+F +YGE++ + DP T RSRGF F+ F D +A V+ V+A+
Sbjct: 26 GLSWQTTQEGLREYFGQYGEVKECLVMRDPLTKRSRGFGFVTFMD-----QAGVDKVLAQ 80
Query: 166 GNHVINNKKIEAK---------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEM 216
H +++K I+ K K ++ KIFVGGLS E++K +F QFG + + +
Sbjct: 81 SRHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDAML 140
Query: 217 PYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+DK+ ++ + F F+TFE E +V + + +IN+K V+ KKA PK
Sbjct: 141 MFDKTTNRHRGFGFVTFEVEDIVEKVCEIHFHEINNKMVECKKAQPK 187
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 44/78 (56%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+F+GGLS + E ++ +F Q+G + E + D + + F F+TF ++ V +L
Sbjct: 21 KMFIGGLSWQTTQEGLREYFGQYGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 80
Query: 246 PKQKINDKEVDVKKATPK 263
+ +++ K +D K A P+
Sbjct: 81 SRHELDSKTIDPKVAFPR 98
Score = 46.2 bits (108), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
G+ + T+E L+E+F +YGE++ + DP T RSRGF F+ F D ++K
Sbjct: 26 GLSWQTTQEGLREYFGQYGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDK 76
Score = 42.0 bits (97), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 37/57 (64%), Gaps = 2/57 (3%)
Query: 603 VDKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFY 659
V+ E++K++F ++G++++ L D T R RGF F+ F+ + +EK V +++F+
Sbjct: 118 VNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFEVEDIVEK--VCEIHFH 172
Score = 39.3 bits (90), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 30/46 (65%)
Query: 452 YDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 497
+DK+ ++ + F F+TFE E +V + + +IN+K V+ KKA PK
Sbjct: 142 FDKTTNRHRGFGFVTFEVEDIVEKVCEIHFHEINNKMVECKKAQPK 187
>gi|194741664|ref|XP_001953309.1| GF17697 [Drosophila ananassae]
gi|190626368|gb|EDV41892.1| GF17697 [Drosophila ananassae]
Length = 634
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 62/159 (38%), Positives = 95/159 (59%), Gaps = 13/159 (8%)
Query: 113 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINN 172
+++LKE+F+ +G + +V + DP T RSRGF FI F+ E +V+ V+ H ++
Sbjct: 218 SDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQ-----EPCTVQKVLKVPIHTLDG 272
Query: 173 KKIEAKKAKAK--------SGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQ 224
KKI+ K A K + KIFVGG+S + EE+KA+F+QFG + ET M D+ +
Sbjct: 273 KKIDPKHATPKNRPRQANKTKKIFVGGVSQDTSAEEVKAYFSQFGPVEETVMLMDQQTKR 332
Query: 225 RKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ F F+TFE+E VV + + I +K+V+ KKA PK
Sbjct: 333 HRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPK 371
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 47/82 (57%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GK+FVGGLS + +++K +F FG + + + D + + F FITF+ V +LK
Sbjct: 205 GKLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVQKVLK 264
Query: 245 NPKQKINDKEVDVKKATPKPEP 266
P ++ K++D K ATPK P
Sbjct: 265 VPIHTLDGKKIDPKHATPKNRP 286
Score = 45.8 bits (107), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 32/44 (72%)
Query: 607 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+++LKE+F+ +G + +V + DP T RSRGF FI F++ +++K
Sbjct: 218 SDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVQK 261
Score = 43.9 bits (102), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFYS 660
D EE+K +FS++G +E + D T R RGF F+ F++ + +++ V +++F++
Sbjct: 303 DTSAEEVKAYFSQFGPVEETVMLMDQQTKRHRGFGFVTFENEDVVDR--VCEIHFHT 357
>gi|410980705|ref|XP_003996716.1| PREDICTED: RNA-binding protein Musashi homolog 2 [Felis catus]
Length = 333
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/168 (38%), Positives = 98/168 (58%), Gaps = 16/168 (9%)
Query: 115 ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNKK 174
L+++FSK+GEI + DP T RSRGF F+ F D ASV+ V+ + +H +++K
Sbjct: 23 SLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFAD-----PASVDKVLGQPHHELDSKT 77
Query: 175 IEAK---------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQR 225
I+ K K ++ KIFVGGLS E++K +F QFG + + + +DK+ ++
Sbjct: 78 IDPKVAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRH 137
Query: 226 KNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE--PFGVRG 271
+ F F+TFE+E VV + + +IN+K V+ KKA PK P G RG
Sbjct: 138 RGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMFPPGTRG 185
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 68/133 (51%), Gaps = 19/133 (14%)
Query: 58 SFSENCLLEDSIGKPLTVSCSHHYYLFDQILRTHFFYIMEAKNKMVSHPGIV-------H 110
+F++ ++ +G+P H+ L + + + A+ KMV+ + +
Sbjct: 55 TFADPASVDKVLGQP-------HHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSAN 107
Query: 111 KITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVI 170
+ E++K++F ++G++E+ L D T R RGF F+ F++ + +EK V H I
Sbjct: 108 TVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEK-----VCEIHFHEI 162
Query: 171 NNKKIEAKKAKAK 183
NNK +E KKA+ K
Sbjct: 163 NNKMVECKKAQPK 175
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 28/42 (66%)
Query: 609 ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
L+++FSK+GEI + DP T RSRGF F+ F D S++K
Sbjct: 23 SLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDK 64
Score = 46.6 bits (109), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 61/115 (53%), Gaps = 16/115 (13%)
Query: 552 SFSENCLLEDSIGKPLTVSCSHYHYLFDQNLRTHYFYIVEAKNKMVSHPGIV-------D 604
+F++ ++ +G+P +H L + + + A+ KMV+ + +
Sbjct: 55 TFADPASVDKVLGQP-------HHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSAN 107
Query: 605 KITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFY 659
+ E++K++F ++G++E+ L D T R RGF F+ F++ + +EK V +++F+
Sbjct: 108 TVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEK--VCEIHFH 160
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 37/68 (54%)
Query: 196 MKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEV 255
+K ++ +F++FG I E + D + + + F F+TF + V +L P +++ K +
Sbjct: 19 IKIYSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSKTI 78
Query: 256 DVKKATPK 263
D K A P+
Sbjct: 79 DPKVAFPR 86
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 35/56 (62%), Gaps = 2/56 (3%)
Query: 452 YDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE--PFGVRG 505
+DK+ ++ + F F+TFE+E VV + + +IN+K V+ KKA PK P G RG
Sbjct: 130 FDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMFPPGTRG 185
>gi|410976792|ref|XP_003994797.1| PREDICTED: RNA-binding protein Musashi homolog 1 [Felis catus]
Length = 380
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 99/167 (59%), Gaps = 15/167 (8%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + T+E L+E+F ++GE++ + DP T RSRGF F+ F D +A V+ V+A+
Sbjct: 44 GLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMD-----QAGVDKVLAQ 98
Query: 166 GNHVINNKKIEAK---------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEM 216
H +++K I+ K K ++ KIFVGGLS E++K +F QFG + + +
Sbjct: 99 SRHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDAML 158
Query: 217 PYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+DK+ ++ + F F+TFE E +V + + +IN+K V+ KKA PK
Sbjct: 159 MFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPK 205
Score = 47.4 bits (111), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 41/75 (54%)
Query: 189 VGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQ 248
+GGLS + E ++ +F QFG + E + D + + F F+TF ++ V +L +
Sbjct: 42 IGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRH 101
Query: 249 KINDKEVDVKKATPK 263
+++ K +D K A P+
Sbjct: 102 ELDSKTIDPKVAFPR 116
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
G+ + T+E L+E+F ++GE++ + DP T RSRGF F+ F D ++K
Sbjct: 44 GLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDK 94
Score = 43.5 bits (101), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 37/57 (64%), Gaps = 2/57 (3%)
Query: 603 VDKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFY 659
V+ E++K++F ++G++++ L D T R RGF F+ F+ + +EK V +++F+
Sbjct: 136 VNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEK--VCEIHFH 190
Score = 40.4 bits (93), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 30/46 (65%)
Query: 452 YDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 497
+DK+ ++ + F F+TFE E +V + + +IN+K V+ KKA PK
Sbjct: 160 FDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPK 205
>gi|342887592|gb|EGU87074.1| hypothetical protein FOXB_02468 [Fusarium oxysporum Fo5176]
Length = 541
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 57/150 (38%), Positives = 96/150 (64%), Gaps = 2/150 (1%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+ L+++FS++GE+ T+ D +TGRSRGF F+ FKD +++ V++ +G +I+ K
Sbjct: 133 QSLRDYFSQFGEVVECTVMRDSSTGRSRGFGFLTFKDAKTVNIVMVKEHFLDGK-IIDPK 191
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
+ + + K+ KIFVGG+S E D+E K +FAQFG +++ + DK + + F F+TF
Sbjct: 192 RAIPRDEQEKTSKIFVGGVSQETTDQEFKEYFAQFGRVVDATLMMDKDTGRPRGFGFVTF 251
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKATPK 263
E+E+ V D N +I+ K ++VKKA P+
Sbjct: 252 ENEAGV-DACINVPLEIHGKPIEVKKAQPR 280
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 56/88 (63%), Gaps = 2/88 (2%)
Query: 179 KAKAK-SGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHES 237
KA AK GK+F+GGL+ E D+ ++ +F+QFG ++E + D S + + F F+TF+ ++
Sbjct: 112 KASAKEDGKMFIGGLNWETTDQSLRDYFSQFGEVVECTVMRDSSTGRSRGFGFLTFK-DA 170
Query: 238 VVIDLLKNPKQKINDKEVDVKKATPKPE 265
++++ + ++ K +D K+A P+ E
Sbjct: 171 KTVNIVMVKEHFLDGKIIDPKRAIPRDE 198
Score = 47.4 bits (111), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 35/51 (68%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYF 658
+ L+++FS++GE+ T+ D +TGRSRGF F+ FKD +++ V++ +
Sbjct: 133 QSLRDYFSQFGEVVECTVMRDSSTGRSRGFGFLTFKDAKTVNIVMVKEHFL 183
Score = 43.5 bits (101), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Query: 601 GIVDKIT-EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLE 649
G+ + T +E KE+F+++G + + TL D +TGR RGF F+ F++ ++
Sbjct: 209 GVSQETTDQEFKEYFAQFGRVVDATLMMDKDTGRPRGFGFVTFENEAGVD 258
>gi|154799960|dbj|BAF75025.1| Musashi-1d [Cynops pyrrhogaster]
Length = 327
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 61/167 (36%), Positives = 99/167 (59%), Gaps = 15/167 (8%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + T+E L+E+F +YGE++ + DP T RSRGF F+ F D +A V+ V+A+
Sbjct: 26 GLSWQTTQEGLREYFGQYGEVKECLVMRDPLTKRSRGFGFVTFMD-----QAGVDKVLAQ 80
Query: 166 GNHVINNKKIEAK---------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEM 216
H +++K I+ K K ++ KIFVGGLS E++K +F QFG + + +
Sbjct: 81 SRHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDAML 140
Query: 217 PYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+DK+ ++ + F F+TFE E +V + + +IN+K V+ KKA PK
Sbjct: 141 MFDKTTNRHRGFGFVTFEVEDIVEKVCEIHFHEINNKMVECKKAQPK 187
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 44/78 (56%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+F+GGLS + E ++ +F Q+G + E + D + + F F+TF ++ V +L
Sbjct: 21 KMFIGGLSWQTTQEGLREYFGQYGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 80
Query: 246 PKQKINDKEVDVKKATPK 263
+ +++ K +D K A P+
Sbjct: 81 SRHELDSKTIDPKVAFPR 98
Score = 46.2 bits (108), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
G+ + T+E L+E+F +YGE++ + DP T RSRGF F+ F D ++K
Sbjct: 26 GLSWQTTQEGLREYFGQYGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDK 76
Score = 42.0 bits (97), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 37/57 (64%), Gaps = 2/57 (3%)
Query: 603 VDKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFY 659
V+ E++K++F ++G++++ L D T R RGF F+ F+ + +EK V +++F+
Sbjct: 118 VNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFEVEDIVEK--VCEIHFH 172
Score = 39.3 bits (90), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 30/46 (65%)
Query: 452 YDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 497
+DK+ ++ + F F+TFE E +V + + +IN+K V+ KKA PK
Sbjct: 142 FDKTTNRHRGFGFVTFEVEDIVEKVCEIHFHEINNKMVECKKAQPK 187
>gi|116787926|gb|ABK24693.1| unknown [Picea sitchensis]
Length = 476
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 98/183 (53%), Gaps = 32/183 (17%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
GI + +EE L+++FSKYGE+ + D TGR+RGF F+VF D S+ D+ +
Sbjct: 12 GISWETSEERLRDYFSKYGEVVQTVIMKDRLTGRARGFGFVVFSD------PSIVDIALQ 65
Query: 166 GNHVINNKKIEAKKAKAKS-------------------------GKIFVGGLSPEMKDEE 200
H I+ + +EAKKA +S KIFVGGL + +E+
Sbjct: 66 EKHTIDGRAVEAKKAVPRSEQQNTRTNSYNNNDSQGYGGGSVRTKKIFVGGLPANLTEED 125
Query: 201 IKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKA 260
K +F QFGNI + + YD + + + F FI+F+ E V +L+ ++N+K V+VK+A
Sbjct: 126 FKNYFQQFGNITDVVVMYDHNTQRPRGFGFISFDSEDAVESVLQKSFHQLNEKLVEVKRA 185
Query: 261 TPK 263
PK
Sbjct: 186 LPK 188
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
KIF+GG+S E +E ++ +F+++G +++T + D+ + + F F+ F S+V D+
Sbjct: 7 KIFIGGISWETSEERLRDYFSKYGEVVQTVIMKDRLTGRARGFGFVVFSDPSIV-DIALQ 65
Query: 246 PKQKINDKEVDVKKATPKPE 265
K I+ + V+ KKA P+ E
Sbjct: 66 EKHTIDGRAVEAKKAVPRSE 85
Score = 46.6 bits (109), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
E L+++FSKYGE+ + D TGR+RGF F+VF D ++ A
Sbjct: 20 ERLRDYFSKYGEVVQTVIMKDRLTGRARGFGFVVFSDPSIVDIA 63
Score = 40.0 bits (92), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 32/54 (59%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 497
I + + YD + + + F FI+F+ E V +L+ ++N+K V+VK+A PK
Sbjct: 135 NITDVVVMYDHNTQRPRGFGFISFDSEDAVESVLQKSFHQLNEKLVEVKRALPK 188
>gi|50286689|ref|XP_445774.1| hypothetical protein [Candida glabrata CBS 138]
gi|49525080|emb|CAG58693.1| unnamed protein product [Candida glabrata]
Length = 452
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/199 (33%), Positives = 113/199 (56%), Gaps = 17/199 (8%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + TE+ L+++FSKYG++E + + DP TGRSRGF F+ F E AS D + +
Sbjct: 128 GLNWETTEDGLRDYFSKYGKVEELKIMKDPATGRSRGFGFLTF------ESASSVDEVVK 181
Query: 166 GNHVINNKKIEAKKA-----KAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDK 220
H+++ K I+ K+A + K+GKIFVGG+ P+++ +E + FAQ+G II+ ++ DK
Sbjct: 182 TQHILDGKVIDPKRAIPREEQDKTGKIFVGGIGPDVRPKEFEEFFAQWGTIIDAQLMLDK 241
Query: 221 SKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK--PEPFGVR--GGRGGR 276
+ + F FIT++ V + +N +++++K+A P+ + G R +
Sbjct: 242 DTGRSRGFGFITYDTPDAVDKVCQNKFIDFKGRKIEIKRAAPRHLQKTGGARQPAQQSSN 301
Query: 277 GGRG-GRGGRMAGGYGGYG 294
G G G +G Y GYG
Sbjct: 302 SQYGMGTGSNSSGQYPGYG 320
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 31/41 (75%)
Query: 610 LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
L+++FSKYG++E + + DP TGRSRGF F+ F+ S+++
Sbjct: 138 LRDYFSKYGKVEELKIMKDPATGRSRGFGFLTFESASSVDE 178
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 52/82 (63%), Gaps = 1/82 (1%)
Query: 184 SGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLL 243
S K+F+GGL+ E ++ ++ +F+++G + E ++ D + + + F F+TFE S V +++
Sbjct: 121 SCKMFIGGLNWETTEDGLRDYFSKYGKVEELKIMKDPATGRSRGFGFLTFESASSVDEVV 180
Query: 244 KNPKQKINDKEVDVKKATPKPE 265
K + ++ K +D K+A P+ E
Sbjct: 181 KT-QHILDGKVIDPKRAIPREE 201
Score = 40.0 bits (92), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 29/43 (67%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+E +E F+++G I + L D +TGRSRGF FI + ++++K
Sbjct: 220 KEFEEFFAQWGTIIDAQLMLDKDTGRSRGFGFITYDTPDAVDK 262
>gi|395833926|ref|XP_003789968.1| PREDICTED: RNA-binding protein Musashi homolog 1 [Otolemur
garnettii]
Length = 341
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 99/167 (59%), Gaps = 15/167 (8%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + T+E L+E+F ++GE++ + DP T RSRGF F+ F D +A V+ V+A+
Sbjct: 5 GLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMD-----QAGVDKVLAQ 59
Query: 166 GNHVINNKKIEAK---------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEM 216
H +++K I+ K K ++ KIFVGGLS E++K +F QFG + + +
Sbjct: 60 SRHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDAML 119
Query: 217 PYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+DK+ ++ + F F+TFE E +V + + +IN+K V+ KKA PK
Sbjct: 120 MFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPK 166
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 43/77 (55%)
Query: 187 IFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNP 246
+F+GGLS + E ++ +F QFG + E + D + + F F+TF ++ V +L
Sbjct: 1 MFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQS 60
Query: 247 KQKINDKEVDVKKATPK 263
+ +++ K +D K A P+
Sbjct: 61 RHELDSKTIDPKVAFPR 77
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
G+ + T+E L+E+F ++GE++ + DP T RSRGF F+ F D ++K
Sbjct: 5 GLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDK 55
Score = 43.1 bits (100), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 37/57 (64%), Gaps = 2/57 (3%)
Query: 603 VDKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFY 659
V+ E++K++F ++G++++ L D T R RGF F+ F+ + +EK V +++F+
Sbjct: 97 VNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEK--VCEIHFH 151
Score = 40.0 bits (92), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 30/46 (65%)
Query: 452 YDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 497
+DK+ ++ + F F+TFE E +V + + +IN+K V+ KKA PK
Sbjct: 121 FDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPK 166
>gi|403281821|ref|XP_003932373.1| PREDICTED: RNA-binding protein Musashi homolog 1 [Saimiri
boliviensis boliviensis]
Length = 352
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 99/167 (59%), Gaps = 15/167 (8%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + T+E L+E+F ++GE++ + DP T RSRGF F+ F D +A V+ V+A+
Sbjct: 27 GLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMD-----QAGVDKVLAQ 81
Query: 166 GNHVINNKKIEAK---------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEM 216
H +++K I+ K K ++ KIFVGGLS E++K +F QFG + + +
Sbjct: 82 SRHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDAML 141
Query: 217 PYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+DK+ ++ + F F+TFE E +V + + +IN+K V+ KKA PK
Sbjct: 142 MFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPK 188
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 45/80 (56%)
Query: 184 SGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLL 243
S K+F+GGLS + E ++ +F QFG + E + D + + F F+TF ++ V +L
Sbjct: 20 SSKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVL 79
Query: 244 KNPKQKINDKEVDVKKATPK 263
+ +++ K +D K A P+
Sbjct: 80 AQSRHELDSKTIDPKVAFPR 99
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
G+ + T+E L+E+F ++GE++ + DP T RSRGF F+ F D ++K
Sbjct: 27 GLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDK 77
Score = 43.1 bits (100), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 37/57 (64%), Gaps = 2/57 (3%)
Query: 603 VDKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFY 659
V+ E++K++F ++G++++ L D T R RGF F+ F+ + +EK V +++F+
Sbjct: 119 VNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEK--VCEIHFH 173
Score = 40.0 bits (92), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 30/46 (65%)
Query: 452 YDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 497
+DK+ ++ + F F+TFE E +V + + +IN+K V+ KKA PK
Sbjct: 143 FDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPK 188
>gi|410913984|ref|XP_003970468.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B-like
[Takifugu rubripes]
Length = 319
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 60/154 (38%), Positives = 92/154 (59%), Gaps = 9/154 (5%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++LK++F+K+GE+ + T+K D TGRSRGF FI+FKD ASVE V+ + H ++ +
Sbjct: 78 KDLKDYFNKFGEVTDCTIKMDQGTGRSRGFGFILFKDP-----ASVEKVLEQKEHKLDGR 132
Query: 174 KIEAKKA----KAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFC 229
I+ K+A K K+FVGGL+P+ E I +F FG I E+P D +R+ F
Sbjct: 133 VIDPKRALAMKKEPVKKVFVGGLNPDTSKEVIHEYFEAFGEIENIELPQDPKTEKRRGFV 192
Query: 230 FITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
FIT++ E+ V L+N + + ++K A PK
Sbjct: 193 FITYKEEACVKKALENKFHTVGGSKCEIKIAQPK 226
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 36/47 (76%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D ++LK++F+K+GE+ + T+K D TGRSRGF FI+FKD S+EK
Sbjct: 74 DTSKKDLKDYFNKFGEVTDCTIKMDQGTGRSRGFGFILFKDPASVEK 120
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 56/94 (59%), Gaps = 1/94 (1%)
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
+I+A K + +GK+FVGGLS + +++K +F +FG + + + D+ + + F FI F
Sbjct: 53 QIDASKDEEDAGKMFVGGLSWDTSKKDLKDYFNKFGEVTDCTIKMDQGTGRSRGFGFILF 112
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKATP-KPEP 266
+ + V +L+ + K++ + +D K+A K EP
Sbjct: 113 KDPASVEKVLEQKEHKLDGRVIDPKRALAMKKEP 146
Score = 47.4 bits (111), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 30/48 (62%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
D E + E+F +GEIEN+ L DP T + RGF FI +K+ ++KA
Sbjct: 158 DTSKEVIHEYFEAFGEIENIELPQDPKTEKRRGFVFITYKEEACVKKA 205
>gi|408396972|gb|EKJ76123.1| hypothetical protein FPSE_03598 [Fusarium pseudograminearum CS3096]
Length = 546
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 96/150 (64%), Gaps = 2/150 (1%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+ L+++F+++GE+ T+ D +TGRSRGF F+ FKD +++ V++ +G +I+ K
Sbjct: 134 QSLRDYFAQFGEVVECTVMRDSSTGRSRGFGFLTFKDAKTVNIVMVKEHFLDG-KIIDPK 192
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
+ + + K+ KIFVGG+S E D+E K +FAQFG +++ + DK + + F F+TF
Sbjct: 193 RAIPRDEQEKTSKIFVGGVSQETTDQEFKEYFAQFGRVVDATLMMDKDTGRPRGFGFVTF 252
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKATPK 263
E+E+ V D N +I+ K ++VKKA P+
Sbjct: 253 ENEAGV-DACINVPLEIHGKPIEVKKAQPR 281
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 56/88 (63%), Gaps = 2/88 (2%)
Query: 179 KAKAK-SGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHES 237
KA AK GK+F+GGL+ E D+ ++ +FAQFG ++E + D S + + F F+TF+ ++
Sbjct: 113 KASAKEDGKMFIGGLNWETTDQSLRDYFAQFGEVVECTVMRDSSTGRSRGFGFLTFK-DA 171
Query: 238 VVIDLLKNPKQKINDKEVDVKKATPKPE 265
++++ + ++ K +D K+A P+ E
Sbjct: 172 KTVNIVMVKEHFLDGKIIDPKRAIPRDE 199
Score = 46.6 bits (109), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 35/51 (68%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYF 658
+ L+++F+++GE+ T+ D +TGRSRGF F+ FKD +++ V++ +
Sbjct: 134 QSLRDYFAQFGEVVECTVMRDSSTGRSRGFGFLTFKDAKTVNIVMVKEHFL 184
Score = 43.5 bits (101), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Query: 601 GIVDKIT-EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLE 649
G+ + T +E KE+F+++G + + TL D +TGR RGF F+ F++ ++
Sbjct: 210 GVSQETTDQEFKEYFAQFGRVVDATLMMDKDTGRPRGFGFVTFENEAGVD 259
>gi|323331635|gb|EGA73049.1| Hrp1p [Saccharomyces cerevisiae AWRI796]
Length = 521
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 98/163 (60%), Gaps = 12/163 (7%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ TE+ L+E+F KYG + ++ + DP TGRSRGF F+ F EK S D + +
Sbjct: 152 GLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSF------EKPSSVDEVVK 205
Query: 166 GNHVINNKKIEAKKA-----KAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDK 220
H+++ K I+ K+A + K+GKIFVGG+ P+++ +E + F+Q+G II+ ++ DK
Sbjct: 206 TQHILDGKVIDPKRAIPRDEQDKTGKIFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDK 265
Query: 221 SKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
Q + F F+T++ V + +N D+++++K+A P+
Sbjct: 266 DTGQSRGFGFVTYDSADAVDRVCQNKFIDFKDRKIEIKRAEPR 308
Score = 47.4 bits (111), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D + L+E+F KYG + ++ + DP TGRSRGF F+ F+ S+++
Sbjct: 156 DTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVDE 202
Score = 47.4 bits (111), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 57/98 (58%), Gaps = 3/98 (3%)
Query: 170 INNKKIEAKKA--KAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKN 227
+ K E KA +S K+F+GGL+ + ++ ++ +F ++G + + ++ D + + +
Sbjct: 129 VTQTKEERSKADLSKESCKMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRG 188
Query: 228 FCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE 265
F F++FE S V +++K + ++ K +D K+A P+ E
Sbjct: 189 FGFLSFEKPSSVDEVVKT-QHILDGKVIDPKRAIPRDE 225
Score = 38.9 bits (89), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 29/43 (67%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+E +E FS++G I + L D +TG+SRGF F+ + +++++
Sbjct: 244 KEFEEFFSQWGTIIDAQLMLDKDTGQSRGFGFVTYDSADAVDR 286
>gi|392465146|dbj|BAM24697.1| musashi homolog 1 [Sus scrofa]
Length = 362
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 99/167 (59%), Gaps = 15/167 (8%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + T+E L+E+F ++GE++ + DP T RSRGF F+ F D +A V+ V+A+
Sbjct: 26 GLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMD-----QAGVDKVLAQ 80
Query: 166 GNHVINNKKIEAK---------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEM 216
H +++K I+ K K ++ KIFVGGLS E++K +F QFG + + +
Sbjct: 81 SRHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDAML 140
Query: 217 PYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+DK+ ++ + F F+TFE E +V + + +IN+K V+ KKA PK
Sbjct: 141 MFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPK 187
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 44/78 (56%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+F+GGLS + E ++ +F QFG + E + D + + F F+TF ++ V +L
Sbjct: 21 KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 80
Query: 246 PKQKINDKEVDVKKATPK 263
+ +++ K +D K A P+
Sbjct: 81 SRHELDSKTIDPKVAFPR 98
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
G+ + T+E L+E+F ++GE++ + DP T RSRGF F+ F D ++K
Sbjct: 26 GLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDK 76
Score = 43.1 bits (100), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 37/57 (64%), Gaps = 2/57 (3%)
Query: 603 VDKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFY 659
V+ E++K++F ++G++++ L D T R RGF F+ F+ + +EK V +++F+
Sbjct: 118 VNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEK--VCEIHFH 172
Score = 39.7 bits (91), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 30/46 (65%)
Query: 452 YDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 497
+DK+ ++ + F F+TFE E +V + + +IN+K V+ KKA PK
Sbjct: 142 FDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPK 187
>gi|291407048|ref|XP_002719860.1| PREDICTED: musashi 1 [Oryctolagus cuniculus]
Length = 568
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 95/161 (59%), Gaps = 14/161 (8%)
Query: 112 ITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVIN 171
+ E L+E+F ++GE++ + DP T RSRGF F+ F D +A V+ V+A+ H ++
Sbjct: 238 VAEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFAD-----QAGVDKVLAQSRHELD 292
Query: 172 NKKIEAK---------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSK 222
+K I+ K K ++ KIFVGGLS E++K +F QFG + + + +DK+
Sbjct: 293 SKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTT 352
Query: 223 SQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
++ + F F+TFE E +V + + +IN+K V+ KKA PK
Sbjct: 353 NRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPK 393
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 44/75 (58%), Gaps = 5/75 (6%)
Query: 109 VHKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNH 168
V+ E++K++F ++G++++ L D T R RGF F+ F+ + +EK V H
Sbjct: 324 VNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEK-----VCEIHFH 378
Query: 169 VINNKKIEAKKAKAK 183
INNK +E KKA+ K
Sbjct: 379 EINNKMVECKKAQPK 393
Score = 47.0 bits (110), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 29/45 (64%)
Query: 606 ITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+ E L+E+F ++GE++ + DP T RSRGF F+ F D ++K
Sbjct: 238 VAEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFADQAGVDK 282
Score = 44.3 bits (103), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 80/192 (41%), Gaps = 43/192 (22%)
Query: 506 GRGGRGGRGGRGGRMAGGYGGYGGYGG-GYGELDYLQLWQ------FFDWISSSFSE--- 555
G G R G G R GR AGG G G G G L L Q + + F +
Sbjct: 192 GTGLRDGAGSREGRAAGGNRGSPGSGKLGRSPEAMLALEQAKAGCVVAEGLREYFGQFGE 251
Query: 556 --NCLLEDSIGKPLT-------------------VSCSHYHYLFDQNLRTHYFYIVEAKN 594
CL+ + PLT V H L + + + A+
Sbjct: 252 VKECLV---MRDPLTKRSRGFGFVTFADQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQP 308
Query: 595 KMVSHP------GI-VDKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTES 647
KMV+ G+ V+ E++K++F ++G++++ L D T R RGF F+ F+ +
Sbjct: 309 KMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDI 368
Query: 648 LEKASVEDVYFY 659
+EK V +++F+
Sbjct: 369 VEK--VCEIHFH 378
Score = 39.7 bits (91), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 30/46 (65%)
Query: 452 YDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 497
+DK+ ++ + F F+TFE E +V + + +IN+K V+ KKA PK
Sbjct: 348 FDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPK 393
>gi|430813105|emb|CCJ29521.1| unnamed protein product [Pneumocystis jirovecii]
Length = 397
Score = 110 bits (274), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 93/150 (62%), Gaps = 1/150 (0%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
E L+ +F ++GE+ + D +TGRSRGF F+ FKD + + V++ +G +I+ K
Sbjct: 13 ESLRAYFEQFGEVTECNVMRDSSTGRSRGFGFLTFKDPKCVNTVMVKEHYLDG-KIIDPK 71
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
+ ++ + K+ K+FVGG+S + ++E + F+ FG +I+ + DK + + F F+TF
Sbjct: 72 RAIPREEQEKTAKMFVGGVSQDCTEDEFREFFSAFGRVIDATLMIDKDTGRPRGFGFVTF 131
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKATPK 263
E ++ V + + P I+DK+++VK+ATPK
Sbjct: 132 ESDAAVENAMSQPYLAIHDKQIEVKRATPK 161
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 187 IFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNP 246
+F+GGL+ E DE ++A+F QFG + E + D S + + F F+TF+ V ++
Sbjct: 1 MFIGGLNWETTDESLRAYFEQFGEVTECNVMRDSSTGRSRGFGFLTFKDPKCVNTVMVK- 59
Query: 247 KQKINDKEVDVKKATPKPE 265
+ ++ K +D K+A P+ E
Sbjct: 60 EHYLDGKIIDPKRAIPREE 78
Score = 47.0 bits (110), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 31/51 (60%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYF 658
E L+ +F ++GE+ + D +TGRSRGF F+ FKD + + V++ Y
Sbjct: 13 ESLRAYFEQFGEVTECNVMRDSSTGRSRGFGFLTFKDPKCVNTVMVKEHYL 63
Score = 45.8 bits (107), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 34/53 (64%)
Query: 445 IIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 497
+I+ + DK + + F F+TFE ++ V + + P I+DK+++VK+ATPK
Sbjct: 109 VIDATLMIDKDTGRPRGFGFVTFESDAAVENAMSQPYLAIHDKQIEVKRATPK 161
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 601 GIVDKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
G+ TE E +E FS +G + + TL D +TGR RGF F+ F+ ++E A
Sbjct: 89 GVSQDCTEDEFREFFSAFGRVIDATLMIDKDTGRPRGFGFVTFESDAAVENA 140
>gi|195036632|ref|XP_001989774.1| GH18982 [Drosophila grimshawi]
gi|193893970|gb|EDV92836.1| GH18982 [Drosophila grimshawi]
Length = 641
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 62/159 (38%), Positives = 95/159 (59%), Gaps = 13/159 (8%)
Query: 113 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINN 172
+++LKE+F+ +G + +V + DP T RSRGF FI F+ E +V+ V+ H ++
Sbjct: 212 SDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQ-----EPCTVDKVLKVPIHTLDG 266
Query: 173 KKIEAKKAKAK--------SGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQ 224
KKI+ K A K + KIFVGG+S + EE+KA+F+QFG + ET M D+ +
Sbjct: 267 KKIDPKHATPKNRPRQANKTKKIFVGGVSQDTSAEEVKAYFSQFGAVEETVMLMDQQTKR 326
Query: 225 RKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ F F+TFE+E VV + + I +K+V+ KKA PK
Sbjct: 327 HRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPK 365
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 47/82 (57%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GK+FVGGLS + +++K +F FG + + + D + + F FITF+ V +LK
Sbjct: 199 GKLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVDKVLK 258
Query: 245 NPKQKINDKEVDVKKATPKPEP 266
P ++ K++D K ATPK P
Sbjct: 259 VPIHTLDGKKIDPKHATPKNRP 280
Score = 45.8 bits (107), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 32/44 (72%)
Query: 607 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+++LKE+F+ +G + +V + DP T RSRGF FI F++ +++K
Sbjct: 212 SDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVDK 255
Score = 43.5 bits (101), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFYS 660
D EE+K +FS++G +E + D T R RGF F+ F++ + +++ V +++F++
Sbjct: 297 DTSAEEVKAYFSQFGAVEETVMLMDQQTKRHRGFGFVTFENEDVVDR--VCEIHFHT 351
>gi|4505255|ref|NP_002433.1| RNA-binding protein Musashi homolog 1 [Homo sapiens]
gi|125630689|ref|NP_001074996.1| RNA-binding protein Musashi homolog 1 [Bos taurus]
gi|296213096|ref|XP_002753122.1| PREDICTED: RNA-binding protein Musashi homolog 1 [Callithrix
jacchus]
gi|51316193|sp|O43347.1|MSI1H_HUMAN RecName: Full=RNA-binding protein Musashi homolog 1;
Short=Musashi-1
gi|2769698|gb|AAB95636.1| similar to murine RNA-binding protein; 99% similar to D49654
(PID:g1434857) [Homo sapiens]
gi|3786320|dbj|BAA33962.1| Musashi [Homo sapiens]
gi|119618592|gb|EAW98186.1| musashi homolog 1 (Drosophila), isoform CRA_b [Homo sapiens]
gi|124358513|dbj|BAF45938.1| RNA-binding protein Musashi-1 [Bos taurus]
gi|147897997|gb|AAI40381.1| Musashi homolog 1 (Drosophila) [synthetic construct]
gi|148921740|gb|AAI46464.1| Musashi homolog 1 (Drosophila) [synthetic construct]
gi|208966796|dbj|BAG73412.1| musashi homolog 1 [synthetic construct]
Length = 362
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 99/167 (59%), Gaps = 15/167 (8%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + T+E L+E+F ++GE++ + DP T RSRGF F+ F D +A V+ V+A+
Sbjct: 26 GLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMD-----QAGVDKVLAQ 80
Query: 166 GNHVINNKKIEAK---------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEM 216
H +++K I+ K K ++ KIFVGGLS E++K +F QFG + + +
Sbjct: 81 SRHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDAML 140
Query: 217 PYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+DK+ ++ + F F+TFE E +V + + +IN+K V+ KKA PK
Sbjct: 141 MFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPK 187
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 44/78 (56%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+F+GGLS + E ++ +F QFG + E + D + + F F+TF ++ V +L
Sbjct: 21 KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 80
Query: 246 PKQKINDKEVDVKKATPK 263
+ +++ K +D K A P+
Sbjct: 81 SRHELDSKTIDPKVAFPR 98
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
G+ + T+E L+E+F ++GE++ + DP T RSRGF F+ F D ++K
Sbjct: 26 GLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDK 76
Score = 43.1 bits (100), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 37/57 (64%), Gaps = 2/57 (3%)
Query: 603 VDKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFY 659
V+ E++K++F ++G++++ L D T R RGF F+ F+ + +EK V +++F+
Sbjct: 118 VNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEK--VCEIHFH 172
Score = 39.7 bits (91), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 30/46 (65%)
Query: 452 YDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 497
+DK+ ++ + F F+TFE E +V + + +IN+K V+ KKA PK
Sbjct: 142 FDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPK 187
>gi|348584450|ref|XP_003477985.1| PREDICTED: RNA-binding protein Musashi homolog 1-like [Cavia
porcellus]
Length = 366
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 99/167 (59%), Gaps = 15/167 (8%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + T+E L+E+F ++GE++ + DP T RSRGF F+ F D +A V+ V+A+
Sbjct: 30 GLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMD-----QAGVDKVLAQ 84
Query: 166 GNHVINNKKIEAK---------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEM 216
H +++K I+ K K ++ KIFVGGLS E++K +F QFG + + +
Sbjct: 85 SRHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDAML 144
Query: 217 PYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+DK+ ++ + F F+TFE E +V + + +IN+K V+ KKA PK
Sbjct: 145 MFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPK 191
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 44/78 (56%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+F+GGLS + E ++ +F QFG + E + D + + F F+TF ++ V +L
Sbjct: 25 KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 84
Query: 246 PKQKINDKEVDVKKATPK 263
+ +++ K +D K A P+
Sbjct: 85 SRHELDSKTIDPKVAFPR 102
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
G+ + T+E L+E+F ++GE++ + DP T RSRGF F+ F D ++K
Sbjct: 30 GLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDK 80
Score = 43.1 bits (100), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 37/57 (64%), Gaps = 2/57 (3%)
Query: 603 VDKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFY 659
V+ E++K++F ++G++++ L D T R RGF F+ F+ + +EK V +++F+
Sbjct: 122 VNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEK--VCEIHFH 176
Score = 40.0 bits (92), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 30/46 (65%)
Query: 452 YDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 497
+DK+ ++ + F F+TFE E +V + + +IN+K V+ KKA PK
Sbjct: 146 FDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPK 191
>gi|242347894|gb|ACS92717.1| musashi-like protein 2L [Ambystoma mexicanum]
Length = 406
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 64/169 (37%), Positives = 98/169 (57%), Gaps = 16/169 (9%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+ L+++F K+GEI + DP T RSRGF F+ F D ASV+ V+A+ +H +++K
Sbjct: 35 DSLRDYFCKFGEIRECMVMRDPTTKRSRGFGFVTFAD-----PASVDKVLAQPHHELDSK 89
Query: 174 KIEAK---------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQ 224
I+ K K ++ KIFVGGLS E++K +F QFG + + + +DK+ ++
Sbjct: 90 TIDPKVAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQYFDQFGKVEDAMLMFDKTTNR 149
Query: 225 RKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE--PFGVRG 271
+ F F+TFE E VV + + +IN+K V+ KKA PK P G RG
Sbjct: 150 HRGFGFVTFEIEDVVEKVCEIHFHEINNKMVECKKAQPKEVMFPPGTRG 198
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 47/84 (55%)
Query: 180 AKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVV 239
A+ GK+F+GGLS + + ++ +F +FG I E + D + + + F F+TF + V
Sbjct: 16 AQHDPGKMFIGGLSWQTSPDSLRDYFCKFGEIRECMVMRDPTTKRSRGFGFVTFADPASV 75
Query: 240 IDLLKNPKQKINDKEVDVKKATPK 263
+L P +++ K +D K A P+
Sbjct: 76 DKVLAQPHHELDSKTIDPKVAFPR 99
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 66/133 (49%), Gaps = 19/133 (14%)
Query: 58 SFSENCLLEDSIGKPLTVSCSHHYYLFDQILRTHFFYIMEAKNKMVSHPGIV-------H 110
+F++ ++ + +P H+ L + + + A+ KMV+ + +
Sbjct: 68 TFADPASVDKVLAQP-------HHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSAN 120
Query: 111 KITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVI 170
+ E++K++F ++G++E+ L D T R RGF F+ F+ + +EK V H I
Sbjct: 121 TVVEDVKQYFDQFGKVEDAMLMFDKTTNRHRGFGFVTFEIEDVVEK-----VCEIHFHEI 175
Query: 171 NNKKIEAKKAKAK 183
NNK +E KKA+ K
Sbjct: 176 NNKMVECKKAQPK 188
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 28/43 (65%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+ L+++F K+GEI + DP T RSRGF F+ F D S++K
Sbjct: 35 DSLRDYFCKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDK 77
Score = 43.9 bits (102), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 26/115 (22%), Positives = 59/115 (51%), Gaps = 16/115 (13%)
Query: 552 SFSENCLLEDSIGKPLTVSCSHYHYLFDQNLRTHYFYIVEAKNKMVSHPGIV-------D 604
+F++ ++ + +P +H L + + + A+ KMV+ + +
Sbjct: 68 TFADPASVDKVLAQP-------HHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSAN 120
Query: 605 KITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFY 659
+ E++K++F ++G++E+ L D T R RGF F+ F+ + +EK V +++F+
Sbjct: 121 TVVEDVKQYFDQFGKVEDAMLMFDKTTNRHRGFGFVTFEIEDVVEK--VCEIHFH 173
Score = 39.7 bits (91), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 34/56 (60%), Gaps = 2/56 (3%)
Query: 452 YDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE--PFGVRG 505
+DK+ ++ + F F+TFE E VV + + +IN+K V+ KKA PK P G RG
Sbjct: 143 FDKTTNRHRGFGFVTFEIEDVVEKVCEIHFHEINNKMVECKKAQPKEVMFPPGTRG 198
>gi|119618593|gb|EAW98187.1| musashi homolog 1 (Drosophila), isoform CRA_c [Homo sapiens]
Length = 343
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 99/167 (59%), Gaps = 15/167 (8%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + T+E L+E+F ++GE++ + DP T RSRGF F+ F D +A V+ V+A+
Sbjct: 26 GLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMD-----QAGVDKVLAQ 80
Query: 166 GNHVINNKKIEAK---------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEM 216
H +++K I+ K K ++ KIFVGGLS E++K +F QFG + + +
Sbjct: 81 SRHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDAML 140
Query: 217 PYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+DK+ ++ + F F+TFE E +V + + +IN+K V+ KKA PK
Sbjct: 141 MFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPK 187
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 44/78 (56%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+F+GGLS + E ++ +F QFG + E + D + + F F+TF ++ V +L
Sbjct: 21 KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 80
Query: 246 PKQKINDKEVDVKKATPK 263
+ +++ K +D K A P+
Sbjct: 81 SRHELDSKTIDPKVAFPR 98
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
G+ + T+E L+E+F ++GE++ + DP T RSRGF F+ F D ++K
Sbjct: 26 GLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDK 76
Score = 43.1 bits (100), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 37/57 (64%), Gaps = 2/57 (3%)
Query: 603 VDKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFY 659
V+ E++K++F ++G++++ L D T R RGF F+ F+ + +EK V +++F+
Sbjct: 118 VNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEK--VCEIHFH 172
Score = 40.0 bits (92), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 30/46 (65%)
Query: 452 YDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 497
+DK+ ++ + F F+TFE E +V + + +IN+K V+ KKA PK
Sbjct: 142 FDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPK 187
>gi|327282604|ref|XP_003226032.1| PREDICTED: RNA-binding protein Musashi homolog 1-like isoform 2
[Anolis carolinensis]
Length = 325
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 86/278 (30%), Positives = 135/278 (48%), Gaps = 41/278 (14%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + T+E L+E+F ++GE++ + DP T RSRGF F+ F D +A V+ V+A+
Sbjct: 27 GLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFVD-----QAGVDKVLAQ 81
Query: 166 GNHVINNKKIEAK---------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEM 216
H +++K I+ K K ++ KIFVGGLS E++K +F QFG + + +
Sbjct: 82 SRHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDAML 141
Query: 217 PYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKP--EPFGVRGGRG 274
+DK+ ++ + F F+TFE E +V + + +IN+K V+ KKA PK P G GR
Sbjct: 142 MFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPKEVMSPTGSARGRS 201
Query: 275 GRGGRGGRGGRMAGGYGGYGGYGGG------YGGILYKPLLFYELNELGISG-------- 320
G + G GY G+ Y GI P Y+ + ++
Sbjct: 202 RVMPYGMDAFMLGIGMLGYPGFQAATYASRSYTGI--APGYTYQFPAIPLTAYGPMAAAA 259
Query: 321 -RSLVCRTGPMVQATPPLAEVDVTGVIMILLGAKNHNS 357
+ V RTG + T P G + L GA N +S
Sbjct: 260 AAAAVVRTGGFLGTTSP-------GPMAELYGAANQDS 290
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 44/78 (56%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+F+GGLS + E ++ +F QFG + E + D + + F F+TF ++ V +L
Sbjct: 22 KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFVDQAGVDKVLAQ 81
Query: 246 PKQKINDKEVDVKKATPK 263
+ +++ K +D K A P+
Sbjct: 82 SRHELDSKTIDPKVAFPR 99
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 28/43 (65%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
E L+E+F ++GE++ + DP T RSRGF F+ F D ++K
Sbjct: 35 EGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFVDQAGVDK 77
Score = 43.1 bits (100), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 37/57 (64%), Gaps = 2/57 (3%)
Query: 603 VDKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFY 659
V+ E++K++F ++G++++ L D T R RGF F+ F+ + +EK V +++F+
Sbjct: 119 VNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEK--VCEIHFH 173
Score = 39.7 bits (91), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 30/46 (65%)
Query: 452 YDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 497
+DK+ ++ + F F+TFE E +V + + +IN+K V+ KKA PK
Sbjct: 143 FDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPK 188
>gi|224284234|gb|ACN39853.1| unknown [Picea sitchensis]
Length = 473
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 102/200 (51%), Gaps = 38/200 (19%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
GI + TE+ LK++F ++GE+ + D T R+RGF F+VF D ++ D +
Sbjct: 12 GISWETTEDRLKDYFKRFGEVVEAVIMKDRTTRRARGFGFVVFAD------PAIADRVVL 65
Query: 166 GNHVINNKKIEAKKA---------------------KAKSGKIFVGGLSPEMKDEEIKAH 204
H I+ + +EAKKA + ++ KIFVGGL+P + + + + +
Sbjct: 66 DKHTIDGRTVEAKKAIPRDDQQHMNRNSNIAHAPPSQVRTKKIFVGGLAPTVTENDFRKY 125
Query: 205 FAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK- 263
F QFG I + + YD S + + F FIT++ E V +L+ +N K V+VK+A PK
Sbjct: 126 FEQFGTITDVVVMYDHSTQRPRGFGFITYDSEDAVDQVLQKTFHDLNGKMVEVKRAVPKE 185
Query: 264 --PEP-------FGVRGGRG 274
P P FGV G RG
Sbjct: 186 LSPSPARTPIGGFGVAGNRG 205
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Query: 182 AKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVID 241
++ GK+F+GG+S E ++ +K +F +FG ++E + D++ + + F F+ F + + D
Sbjct: 3 SEKGKLFIGGISWETTEDRLKDYFKRFGEVVEAVIMKDRTTRRARGFGFVVFA-DPAIAD 61
Query: 242 LLKNPKQKINDKEVDVKKATPKPE 265
+ K I+ + V+ KKA P+ +
Sbjct: 62 RVVLDKHTIDGRTVEAKKAIPRDD 85
Score = 46.2 bits (108), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 38/74 (51%), Gaps = 10/74 (13%)
Query: 445 IIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK---PEP- 500
I + + YD S + + F FIT++ E V +L+ +N K V+VK+A PK P P
Sbjct: 132 ITDVVVMYDHSTQRPRGFGFITYDSEDAVDQVLQKTFHDLNGKMVEVKRAVPKELSPSPA 191
Query: 501 ------FGVRGGRG 508
FGV G RG
Sbjct: 192 RTPIGGFGVAGNRG 205
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKD 644
GI + TE+ LK++F ++GE+ + D T R+RGF F+VF D
Sbjct: 12 GISWETTEDRLKDYFKRFGEVVEAVIMKDRTTRRARGFGFVVFAD 56
>gi|307105138|gb|EFN53389.1| hypothetical protein CHLNCDRAFT_36600 [Chlorella variabilis]
Length = 321
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 63/164 (38%), Positives = 95/164 (57%), Gaps = 13/164 (7%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ TEE L++HFSKYG I + D TGR RGF F+ F + + + A VEDV
Sbjct: 15 GLSWDTTEEKLRDHFSKYGSIVEAVVMRDRQTGRPRGFGFVTFTEPAAAD-AVVEDV--- 70
Query: 166 GNHVINNKKIEAKKA-----KAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDK 220
HVI+ ++I+AKK+ K K+ K+FVGGLSP+ +++ + +F+QFG ++E ++ D
Sbjct: 71 --HVIDGRQIDAKKSVPQEMKPKARKVFVGGLSPDTTEDQFREYFSQFGEVVEAQIMQDH 128
Query: 221 SKSQRKNFCFITF-EHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ + F F+TF E S + K+V+VK ATPK
Sbjct: 129 MSGRSRGFGFVTFAEDASAESVFAAGTMHDLGGKKVEVKPATPK 172
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 50/83 (60%), Gaps = 1/83 (1%)
Query: 181 KAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVI 240
+ S K+F+GGLS + +E+++ HF+++G+I+E + D+ + + F F+TF E
Sbjct: 5 RPTSAKLFLGGLSWDTTEEKLRDHFSKYGSIVEAVVMRDRQTGRPRGFGFVTFT-EPAAA 63
Query: 241 DLLKNPKQKINDKEVDVKKATPK 263
D + I+ +++D KK+ P+
Sbjct: 64 DAVVEDVHVIDGRQIDAKKSVPQ 86
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVY 657
D E+L++HFSKYG I + D TGR RGF F+ F + + + A VEDV+
Sbjct: 19 DTTEEKLRDHFSKYGSIVEAVVMRDRQTGRPRGFGFVTFTEPAAAD-AVVEDVH 71
Score = 43.9 bits (102), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 31/54 (57%), Gaps = 5/54 (9%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVY 657
D ++ +E+FS++GE+ + D +GRSRGF F+ F E AS E V+
Sbjct: 103 DTTEDQFREYFSQFGEVVEAQIMQDHMSGRSRGFGFVTFA-----EDASAESVF 151
>gi|195453885|ref|XP_002073986.1| GK12850 [Drosophila willistoni]
gi|194170071|gb|EDW84972.1| GK12850 [Drosophila willistoni]
Length = 641
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 62/159 (38%), Positives = 95/159 (59%), Gaps = 13/159 (8%)
Query: 113 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINN 172
+E+LKE+F+ +G + +V + DP T RSRGF FI F+ E +V+ V+ H ++
Sbjct: 212 SEKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQ-----EPCTVDKVLKVPIHTLDG 266
Query: 173 KKIEAKKAKAK--------SGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQ 224
KKI+ K A K + KIFVGG+S + +E+KA+F+QFG + ET M D+ +
Sbjct: 267 KKIDPKHATPKNRPRQANKTKKIFVGGVSQDTSADEVKAYFSQFGPVEETVMLMDQQTKR 326
Query: 225 RKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ F F+TFE+E VV + + I +K+V+ KKA PK
Sbjct: 327 HRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPK 365
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 47/82 (57%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GK+FVGGLS + E++K +F FG + + + D + + F FITF+ V +LK
Sbjct: 199 GKLFVGGLSWQTSSEKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVDKVLK 258
Query: 245 NPKQKINDKEVDVKKATPKPEP 266
P ++ K++D K ATPK P
Sbjct: 259 VPIHTLDGKKIDPKHATPKNRP 280
Score = 47.0 bits (110), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 32/44 (72%)
Query: 607 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+E+LKE+F+ +G + +V + DP T RSRGF FI F++ +++K
Sbjct: 212 SEKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVDK 255
Score = 42.4 bits (98), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFYS 660
D +E+K +FS++G +E + D T R RGF F+ F++ + +++ V +++F++
Sbjct: 297 DTSADEVKAYFSQFGPVEETVMLMDQQTKRHRGFGFVTFENEDVVDR--VCEIHFHT 351
>gi|359320431|ref|XP_532379.3| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein Musashi homolog
2 isoform 1 [Canis lupus familiaris]
Length = 328
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 64/169 (37%), Positives = 99/169 (58%), Gaps = 16/169 (9%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
E L+++FSK+GEI + +P T RSRGF F+ F D ASV+ V+ + +H +++K
Sbjct: 35 ESLRDYFSKFGEIXKCLVLRNPTTKRSRGFGFVTFAD-----PASVDKVLGQPHHELDSK 89
Query: 174 KIEAK---------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQ 224
I+ K K ++ KIFVGGLS E++K +F QFG + + + +DK+ ++
Sbjct: 90 TIDPKVAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNR 149
Query: 225 RKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE--PFGVRG 271
+ F F+TFE+E VV + + +IN+K V+ KKA PK P G RG
Sbjct: 150 HRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMFPPGTRG 198
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 68/133 (51%), Gaps = 19/133 (14%)
Query: 58 SFSENCLLEDSIGKPLTVSCSHHYYLFDQILRTHFFYIMEAKNKMVSHPGIV-------H 110
+F++ ++ +G+P H+ L + + + A+ KMV+ + +
Sbjct: 68 TFADPASVDKVLGQP-------HHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSAN 120
Query: 111 KITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVI 170
+ E++K++F ++G++E+ L D T R RGF F+ F++ + +EK V H I
Sbjct: 121 TVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEK-----VCEIHFHEI 175
Query: 171 NNKKIEAKKAKAK 183
NNK +E KKA+ K
Sbjct: 176 NNKMVECKKAQPK 188
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 49/87 (56%)
Query: 177 AKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHE 236
A ++ GK+F+GGLS + E ++ +F++FG I + + + + + + F F+TF
Sbjct: 13 ANDSQHDPGKMFIGGLSWQTSPESLRDYFSKFGEIXKCLVLRNPTTKRSRGFGFVTFADP 72
Query: 237 SVVIDLLKNPKQKINDKEVDVKKATPK 263
+ V +L P +++ K +D K A P+
Sbjct: 73 ASVDKVLGQPHHELDSKTIDPKVAFPR 99
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 29/43 (67%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
E L+++FSK+GEI + +P T RSRGF F+ F D S++K
Sbjct: 35 ESLRDYFSKFGEIXKCLVLRNPTTKRSRGFGFVTFADPASVDK 77
Score = 47.4 bits (111), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 61/115 (53%), Gaps = 16/115 (13%)
Query: 552 SFSENCLLEDSIGKPLTVSCSHYHYLFDQNLRTHYFYIVEAKNKMVSHPGIV-------D 604
+F++ ++ +G+P +H L + + + A+ KMV+ + +
Sbjct: 68 TFADPASVDKVLGQP-------HHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSAN 120
Query: 605 KITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFY 659
+ E++K++F ++G++E+ L D T R RGF F+ F++ + +EK V +++F+
Sbjct: 121 TVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEK--VCEIHFH 173
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 35/56 (62%), Gaps = 2/56 (3%)
Query: 452 YDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE--PFGVRG 505
+DK+ ++ + F F+TFE+E VV + + +IN+K V+ KKA PK P G RG
Sbjct: 143 FDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMFPPGTRG 198
>gi|70989777|ref|XP_749738.1| heterogeneous nuclear ribonucleoprotein HRP1 [Aspergillus fumigatus
Af293]
gi|66847369|gb|EAL87700.1| heterogeneous nuclear ribonucleoprotein HRP1 [Aspergillus fumigatus
Af293]
Length = 608
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 55/150 (36%), Positives = 91/150 (60%), Gaps = 2/150 (1%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+ L+++FS++GE++ T+ D TGRSRGF F+ FKD +++ V++ +G +I+ K
Sbjct: 119 QSLRDYFSQFGEVQECTVMRDSATGRSRGFGFLTFKDPKTVNTVMVKEHYLDGK-IIDPK 177
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
+ + + K+ KIFVGG+S E ++E K F QFG +I+ + DK + + F F+TF
Sbjct: 178 RAIPRDEQEKTSKIFVGGVSQEATEQEFKEFFTQFGRVIDATLMIDKDTGRPRGFGFVTF 237
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ E+ V L P I K ++VKKA P+
Sbjct: 238 DSEAAVEAALSRPL-AICGKPIEVKKAQPR 266
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GK+F+GGL+ E D+ ++ +F+QFG + E + D + + + F F+TF+ V ++
Sbjct: 105 GKMFIGGLNWETTDQSLRDYFSQFGEVQECTVMRDSATGRSRGFGFLTFKDPKTVNTVMV 164
Query: 245 NPKQKINDKEVDVKKATPKPE 265
+ ++ K +D K+A P+ E
Sbjct: 165 K-EHYLDGKIIDPKRAIPRDE 184
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 35/51 (68%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYF 658
+ L+++FS++GE++ T+ D TGRSRGF F+ FKD +++ V++ Y
Sbjct: 119 QSLRDYFSQFGEVQECTVMRDSATGRSRGFGFLTFKDPKTVNTVMVKEHYL 169
Score = 45.4 bits (106), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 601 GIVDKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
G+ + TE E KE F+++G + + TL D +TGR RGF F+ F ++E A
Sbjct: 195 GVSQEATEQEFKEFFTQFGRVIDATLMIDKDTGRPRGFGFVTFDSEAAVEAA 246
>gi|119618591|gb|EAW98185.1| musashi homolog 1 (Drosophila), isoform CRA_a [Homo sapiens]
Length = 351
Score = 109 bits (273), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 99/167 (59%), Gaps = 15/167 (8%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + T+E L+E+F ++GE++ + DP T RSRGF F+ F D +A V+ V+A+
Sbjct: 26 GLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMD-----QAGVDKVLAQ 80
Query: 166 GNHVINNKKIEAK---------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEM 216
H +++K I+ K K ++ KIFVGGLS E++K +F QFG + + +
Sbjct: 81 SRHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDAML 140
Query: 217 PYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+DK+ ++ + F F+TFE E +V + + +IN+K V+ KKA PK
Sbjct: 141 MFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPK 187
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 44/78 (56%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+F+GGLS + E ++ +F QFG + E + D + + F F+TF ++ V +L
Sbjct: 21 KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 80
Query: 246 PKQKINDKEVDVKKATPK 263
+ +++ K +D K A P+
Sbjct: 81 SRHELDSKTIDPKVAFPR 98
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
G+ + T+E L+E+F ++GE++ + DP T RSRGF F+ F D ++K
Sbjct: 26 GLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDK 76
Score = 43.1 bits (100), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 37/57 (64%), Gaps = 2/57 (3%)
Query: 603 VDKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFY 659
V+ E++K++F ++G++++ L D T R RGF F+ F+ + +EK V +++F+
Sbjct: 118 VNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEK--VCEIHFH 172
Score = 39.7 bits (91), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 30/46 (65%)
Query: 452 YDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 497
+DK+ ++ + F F+TFE E +V + + +IN+K V+ KKA PK
Sbjct: 142 FDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPK 187
>gi|347966951|ref|XP_321067.5| AGAP001993-PA [Anopheles gambiae str. PEST]
gi|333469826|gb|EAA01260.6| AGAP001993-PA [Anopheles gambiae str. PEST]
Length = 556
Score = 109 bits (273), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 62/160 (38%), Positives = 94/160 (58%), Gaps = 14/160 (8%)
Query: 113 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINN 172
+E+L E+F +G + +V + DP T RSRGF FI F++ S++K V+ H ++
Sbjct: 195 SEKLSEYFGMFGTVTDVLIMKDPVTQRSRGFGFITFQEPNSVDK-----VLQVPIHTLDG 249
Query: 173 KKIEAKKAKAK---------SGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKS 223
KKI+ K A K + KIFVGG+S + EE+KA+F+QFG + ET M D+
Sbjct: 250 KKIDPKHATPKNRPKTQSNKTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTK 309
Query: 224 QRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ + F F+TFE+E VV + + I +K+V+ KKA PK
Sbjct: 310 RHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPK 349
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 47/82 (57%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GK+FVGGLS + E++ +F FG + + + D + + F FITF+ + V +L+
Sbjct: 182 GKLFVGGLSWQTSSEKLSEYFGMFGTVTDVLIMKDPVTQRSRGFGFITFQEPNSVDKVLQ 241
Query: 245 NPKQKINDKEVDVKKATPKPEP 266
P ++ K++D K ATPK P
Sbjct: 242 VPIHTLDGKKIDPKHATPKNRP 263
Score = 46.6 bits (109), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 30/44 (68%)
Query: 607 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+E+L E+F +G + +V + DP T RSRGF FI F++ S++K
Sbjct: 195 SEKLSEYFGMFGTVTDVLIMKDPVTQRSRGFGFITFQEPNSVDK 238
Score = 43.9 bits (102), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 37/57 (64%), Gaps = 2/57 (3%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFYS 660
D EE+K +FS++G++E + D T R RGF F+ F++ + +++ V +++F++
Sbjct: 281 DTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEDVVDR--VCEIHFHT 335
>gi|296478518|tpg|DAA20633.1| TPA: musashi 1 [Bos taurus]
Length = 342
Score = 109 bits (273), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 99/167 (59%), Gaps = 15/167 (8%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + T+E L+E+F ++GE++ + DP T RSRGF F+ F D +A V+ V+A+
Sbjct: 26 GLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMD-----QAGVDKVLAQ 80
Query: 166 GNHVINNKKIEAK---------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEM 216
H +++K I+ K K ++ KIFVGGLS E++K +F QFG + + +
Sbjct: 81 SRHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDAML 140
Query: 217 PYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+DK+ ++ + F F+TFE E +V + + +IN+K V+ KKA PK
Sbjct: 141 MFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPK 187
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 44/78 (56%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+F+GGLS + E ++ +F QFG + E + D + + F F+TF ++ V +L
Sbjct: 21 KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 80
Query: 246 PKQKINDKEVDVKKATPK 263
+ +++ K +D K A P+
Sbjct: 81 SRHELDSKTIDPKVAFPR 98
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
G+ + T+E L+E+F ++GE++ + DP T RSRGF F+ F D ++K
Sbjct: 26 GLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDK 76
Score = 43.1 bits (100), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 37/57 (64%), Gaps = 2/57 (3%)
Query: 603 VDKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFY 659
V+ E++K++F ++G++++ L D T R RGF F+ F+ + +EK V +++F+
Sbjct: 118 VNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEK--VCEIHFH 172
Score = 39.3 bits (90), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 30/46 (65%)
Query: 452 YDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 497
+DK+ ++ + F F+TFE E +V + + +IN+K V+ KKA PK
Sbjct: 142 FDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPK 187
>gi|308477515|ref|XP_003100971.1| CRE-SQD-1 protein [Caenorhabditis remanei]
gi|308264315|gb|EFP08268.1| CRE-SQD-1 protein [Caenorhabditis remanei]
Length = 334
Score = 109 bits (273), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 67/182 (36%), Positives = 93/182 (51%), Gaps = 21/182 (11%)
Query: 113 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTE--SLEKASVEDVIAEGNHVI 170
E+L HF++YGE+ +K D GRSRGFAF+ F E L A+ E I + I
Sbjct: 42 NEDLSSHFTQYGEVSQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALAAREQTIKGKSVSI 101
Query: 171 N---------NK---------KIEAKKAKAKSGK-IFVGGLSPEMKDEEIKAHFAQFGNI 211
N N+ K+E K AK++ K +FVGGL + ++E+++HF QFG +
Sbjct: 102 NFFLISKLKKNRLFKCFKFVFKVEVKPAKSRENKKVFVGGLPSDYSEQELRSHFEQFGKV 161
Query: 212 IETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGVRG 271
+ E P+DK R+NF FI FE E KQ +E DVKKA P+ + F
Sbjct: 162 DDIEWPFDKQTKTRRNFAFIVFEEEESADKASSQTKQTFGTRECDVKKAVPQGKRFPGAQ 221
Query: 272 GR 273
GR
Sbjct: 222 GR 223
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 42/72 (58%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
KIFVGG+SPE+ +E++ +HF Q+G + + ++ YD++ + + F F+ F L
Sbjct: 30 KIFVGGISPEVNNEDLSSHFTQYGEVSQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALAA 89
Query: 246 PKQKINDKEVDV 257
+Q I K V +
Sbjct: 90 REQTIKGKSVSI 101
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 45/104 (43%), Gaps = 5/104 (4%)
Query: 409 FLTKTTTVPMTTTEHMVLVTG---TDMMHMEVTEAVPM--EIIETEMPYDKSKSQRKNFC 463
F+ K P + E+ + G +D E+ ++ + E P+DK R+NF
Sbjct: 120 FVFKVEVKPAKSRENKKVFVGGLPSDYSEQELRSHFEQFGKVDDIEWPFDKQTKTRRNFA 179
Query: 464 FITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGVRGGR 507
FI FE E KQ +E DVKKA P+ + F GR
Sbjct: 180 FIVFEEEESADKASSQTKQTFGTRECDVKKAVPQGKRFPGAQGR 223
Score = 45.8 bits (107), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 593 KNKMVSHPGIVDKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
+NK V G+ +E EL+ HF ++G+++++ D T R FAFIVF++ ES +KA
Sbjct: 133 ENKKVFVGGLPSDYSEQELRSHFEQFGKVDDIEWPFDKQTKTRRNFAFIVFEEEESADKA 192
Query: 652 SVE 654
S +
Sbjct: 193 SSQ 195
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 27/45 (60%)
Query: 607 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
E+L HF++YGE+ +K D GRSRGFAF+ F E + A
Sbjct: 42 NEDLSSHFTQYGEVSQAQVKYDRTNGRSRGFAFVEFTTGEGCKLA 86
>gi|159129147|gb|EDP54261.1| heterogeneous nuclear ribonucleoprotein HRP1 [Aspergillus fumigatus
A1163]
Length = 608
Score = 109 bits (273), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 55/150 (36%), Positives = 91/150 (60%), Gaps = 2/150 (1%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+ L+++FS++GE++ T+ D TGRSRGF F+ FKD +++ V++ +G +I+ K
Sbjct: 119 QSLRDYFSQFGEVQECTVMRDSATGRSRGFGFLTFKDPKTVNTVMVKEHYLDGK-IIDPK 177
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
+ + + K+ KIFVGG+S E ++E K F QFG +I+ + DK + + F F+TF
Sbjct: 178 RAIPRDEQEKTSKIFVGGVSQEATEQEFKEFFTQFGRVIDATLMIDKDTGRPRGFGFVTF 237
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ E+ V L P I K ++VKKA P+
Sbjct: 238 DSEAAVEAALSRPL-AICGKPIEVKKAQPR 266
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 35/51 (68%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYF 658
+ L+++FS++GE++ T+ D TGRSRGF F+ FKD +++ V++ Y
Sbjct: 119 QSLRDYFSQFGEVQECTVMRDSATGRSRGFGFLTFKDPKTVNTVMVKEHYL 169
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GK+F+GGL+ E D+ ++ +F+QFG + E + D + + + F F+TF+ V ++
Sbjct: 105 GKMFIGGLNWETTDQSLRDYFSQFGEVQECTVMRDSATGRSRGFGFLTFKDPKTVNTVMV 164
Query: 245 NPKQKINDKEVDVKKATPKPE 265
+ ++ K +D K+A P+ E
Sbjct: 165 K-EHYLDGKIIDPKRAIPRDE 184
Score = 45.4 bits (106), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 601 GIVDKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
G+ + TE E KE F+++G + + TL D +TGR RGF F+ F ++E A
Sbjct: 195 GVSQEATEQEFKEFFTQFGRVIDATLMIDKDTGRPRGFGFVTFDSEAAVEAA 246
>gi|209155336|gb|ACI33900.1| Heterogeneous nuclear ribonucleoprotein A/B [Salmo salar]
Length = 348
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 60/153 (39%), Positives = 94/153 (61%), Gaps = 9/153 (5%)
Query: 115 ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNKK 174
+LK++FSK+GE+ + T+K D TGRSRGF FI+FK E A V+ V+ + H ++ ++
Sbjct: 99 DLKDYFSKFGEVTDCTIKMDQQTGRSRGFGFILFK-----EAAGVDKVLEQKEHRLDGRQ 153
Query: 175 IEAKKAKAKSG----KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCF 230
I+ KKA A KIFVGGL+P+ + E I+ +F FG I E+P D +R+ F F
Sbjct: 154 IDPKKAMAMKKEPVKKIFVGGLNPDTEKEVIQEYFGTFGEIETIELPQDPKTEKRRGFVF 213
Query: 231 ITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
IT++ E+ V +L+ ++ + ++K A PK
Sbjct: 214 ITYKDETPVKKVLEKKFHNVSGSKCEIKIAQPK 246
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 57/94 (60%), Gaps = 1/94 (1%)
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
+I A K + +GK+FVGGLS + +++K +F++FG + + + D+ + + F FI F
Sbjct: 73 QINASKGEEDAGKMFVGGLSWDTSKKDLKDYFSKFGEVTDCTIKMDQQTGRSRGFGFILF 132
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKATP-KPEP 266
+ + V +L+ + +++ +++D KKA K EP
Sbjct: 133 KEAAGVDKVLEQKEHRLDGRQIDPKKAMAMKKEP 166
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 35/47 (74%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D ++LK++FSK+GE+ + T+K D TGRSRGF FI+FK+ ++K
Sbjct: 94 DTSKKDLKDYFSKFGEVTDCTIKMDQQTGRSRGFGFILFKEAAGVDK 140
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 29/47 (61%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D E ++E+F +GEIE + L DP T + RGF FI +KD ++K
Sbjct: 178 DTEKEVIQEYFGTFGEIETIELPQDPKTEKRRGFVFITYKDETPVKK 224
>gi|148225236|ref|NP_001084027.1| musashi RNA-binding protein 2 [Xenopus laevis]
gi|214936|gb|AAA50004.1| ribonucleoprotein [Xenopus laevis]
Length = 406
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 63/169 (37%), Positives = 99/169 (58%), Gaps = 16/169 (9%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+ L+++F+K+GEI + DP T RSRGF F+ F D ASV+ V+A+ +H +++K
Sbjct: 35 DSLRDYFNKFGEIRECMVMRDPTTKRSRGFGFVTFAD-----PASVDKVLAQPHHELDSK 89
Query: 174 KIEAK---------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQ 224
I+ K K ++ KIFVGGLS E++K +F Q+G + + + +DK+ ++
Sbjct: 90 TIDPKVAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQYGKVEDAMLMFDKTTNR 149
Query: 225 RKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE--PFGVRG 271
+ F F+TFE E VV + + +IN+K V+ KKA PK P G RG
Sbjct: 150 HRGFGFVTFEIEDVVEKVCEIHFHEINNKMVECKKAQPKEVMFPPGTRG 198
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 66/133 (49%), Gaps = 19/133 (14%)
Query: 58 SFSENCLLEDSIGKPLTVSCSHHYYLFDQILRTHFFYIMEAKNKMVSHPGIV-------H 110
+F++ ++ + +P H+ L + + + A+ KMV+ + +
Sbjct: 68 TFADPASVDKVLAQP-------HHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSAN 120
Query: 111 KITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVI 170
+ E++K++F +YG++E+ L D T R RGF F+ F+ + +EK V H I
Sbjct: 121 TVVEDVKQYFEQYGKVEDAMLMFDKTTNRHRGFGFVTFEIEDVVEK-----VCEIHFHEI 175
Query: 171 NNKKIEAKKAKAK 183
NNK +E KKA+ K
Sbjct: 176 NNKMVECKKAQPK 188
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 45/79 (56%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GK+F+GGLS + + ++ +F +FG I E + D + + + F F+TF + V +L
Sbjct: 21 GKMFIGGLSWQTSPDSLRDYFNKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLA 80
Query: 245 NPKQKINDKEVDVKKATPK 263
P +++ K +D K A P+
Sbjct: 81 QPHHELDSKTIDPKVAFPR 99
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 29/43 (67%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+ L+++F+K+GEI + DP T RSRGF F+ F D S++K
Sbjct: 35 DSLRDYFNKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDK 77
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 59/115 (51%), Gaps = 16/115 (13%)
Query: 552 SFSENCLLEDSIGKPLTVSCSHYHYLFDQNLRTHYFYIVEAKNKMVSHPGIV-------D 604
+F++ ++ + +P +H L + + + A+ KMV+ + +
Sbjct: 68 TFADPASVDKVLAQP-------HHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSAN 120
Query: 605 KITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFY 659
+ E++K++F +YG++E+ L D T R RGF F+ F+ + +EK V +++F+
Sbjct: 121 TVVEDVKQYFEQYGKVEDAMLMFDKTTNRHRGFGFVTFEIEDVVEK--VCEIHFH 173
Score = 39.7 bits (91), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 34/56 (60%), Gaps = 2/56 (3%)
Query: 452 YDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE--PFGVRG 505
+DK+ ++ + F F+TFE E VV + + +IN+K V+ KKA PK P G RG
Sbjct: 143 FDKTTNRHRGFGFVTFEIEDVVEKVCEIHFHEINNKMVECKKAQPKEVMFPPGTRG 198
>gi|213623508|gb|AAI69841.1| Ribonucleoprotein [Xenopus laevis]
Length = 406
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 63/169 (37%), Positives = 99/169 (58%), Gaps = 16/169 (9%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+ L+++F+K+GEI + DP T RSRGF F+ F D ASV+ V+A+ +H +++K
Sbjct: 35 DSLRDYFNKFGEIRECMVMRDPTTKRSRGFGFVTFAD-----PASVDKVLAQPHHELDSK 89
Query: 174 KIEAK---------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQ 224
I+ K K ++ KIFVGGLS E++K +F Q+G + + + +DK+ ++
Sbjct: 90 TIDPKVAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQYGKVEDAMLMFDKTTNR 149
Query: 225 RKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE--PFGVRG 271
+ F F+TFE E VV + + +IN+K V+ KKA PK P G RG
Sbjct: 150 HRGFGFVTFEIEDVVEKVCEIHFHEINNKMVECKKAQPKEVMFPPGTRG 198
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 66/133 (49%), Gaps = 19/133 (14%)
Query: 58 SFSENCLLEDSIGKPLTVSCSHHYYLFDQILRTHFFYIMEAKNKMVSHPGIV-------H 110
+F++ ++ + +P H+ L + + + A+ KMV+ + +
Sbjct: 68 TFADPASVDKVLAQP-------HHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSAN 120
Query: 111 KITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVI 170
+ E++K++F +YG++E+ L D T R RGF F+ F+ + +EK V H I
Sbjct: 121 TVVEDVKQYFEQYGKVEDAMLMFDKTTNRHRGFGFVTFEIEDVVEK-----VCEIHFHEI 175
Query: 171 NNKKIEAKKAKAK 183
NNK +E KKA+ K
Sbjct: 176 NNKMVECKKAQPK 188
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 45/79 (56%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GK+F+GGLS + + ++ +F +FG I E + D + + + F F+TF + V +L
Sbjct: 21 GKMFIGGLSWQTSPDSLRDYFNKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLA 80
Query: 245 NPKQKINDKEVDVKKATPK 263
P +++ K +D K A P+
Sbjct: 81 QPHHELDSKTIDPKVAFPR 99
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 29/43 (67%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+ L+++F+K+GEI + DP T RSRGF F+ F D S++K
Sbjct: 35 DSLRDYFNKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDK 77
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 59/115 (51%), Gaps = 16/115 (13%)
Query: 552 SFSENCLLEDSIGKPLTVSCSHYHYLFDQNLRTHYFYIVEAKNKMVSHPGIV-------D 604
+F++ ++ + +P +H L + + + A+ KMV+ + +
Sbjct: 68 TFADPASVDKVLAQP-------HHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSAN 120
Query: 605 KITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFY 659
+ E++K++F +YG++E+ L D T R RGF F+ F+ + +EK V +++F+
Sbjct: 121 TVVEDVKQYFEQYGKVEDAMLMFDKTTNRHRGFGFVTFEIEDVVEK--VCEIHFH 173
Score = 39.7 bits (91), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 34/56 (60%), Gaps = 2/56 (3%)
Query: 452 YDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE--PFGVRG 505
+DK+ ++ + F F+TFE E VV + + +IN+K V+ KKA PK P G RG
Sbjct: 143 FDKTTNRHRGFGFVTFEIEDVVEKVCEIHFHEINNKMVECKKAQPKEVMFPPGTRG 198
>gi|323303112|gb|EGA56914.1| Hrp1p [Saccharomyces cerevisiae FostersB]
Length = 550
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 98/163 (60%), Gaps = 12/163 (7%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ TE+ L+E+F KYG + ++ + DP TGRSRGF F+ F EK S D + +
Sbjct: 165 GLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSF------EKPSSVDEVVK 218
Query: 166 GNHVINNKKIEAKKA-----KAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDK 220
H+++ K I+ K+A + K+GKIFVGG+ P+++ +E + F+Q+G II+ ++ DK
Sbjct: 219 TQHILDGKVIDPKRAIPRDEQDKTGKIFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDK 278
Query: 221 SKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
Q + F F+T++ V + +N D+++++K+A P+
Sbjct: 279 DTGQSRGFGFVTYDSADAVDRVCQNKFIDFKDRKIEIKRAEPR 321
Score = 47.4 bits (111), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D + L+E+F KYG + ++ + DP TGRSRGF F+ F+ S+++
Sbjct: 169 DTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVDE 215
Score = 47.0 bits (110), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 57/98 (58%), Gaps = 3/98 (3%)
Query: 170 INNKKIEAKKA--KAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKN 227
+ K E KA +S K+F+GGL+ + ++ ++ +F ++G + + ++ D + + +
Sbjct: 142 VTQTKEERSKADLSKESCKMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRG 201
Query: 228 FCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE 265
F F++FE S V +++K + ++ K +D K+A P+ E
Sbjct: 202 FGFLSFEKPSSVDEVVKT-QHILDGKVIDPKRAIPRDE 238
Score = 38.9 bits (89), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 29/43 (67%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+E +E FS++G I + L D +TG+SRGF F+ + +++++
Sbjct: 257 KEFEEFFSQWGTIIDAQLMLDKDTGQSRGFGFVTYDSADAVDR 299
>gi|195112196|ref|XP_002000660.1| GI22407 [Drosophila mojavensis]
gi|193917254|gb|EDW16121.1| GI22407 [Drosophila mojavensis]
Length = 679
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 62/159 (38%), Positives = 95/159 (59%), Gaps = 13/159 (8%)
Query: 113 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINN 172
+E+LKE+F+ +G + +V + DP T RSRGF FI F+ E +V+ V+ H ++
Sbjct: 239 SEKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQ-----EPCTVDKVLKVPIHTLDG 293
Query: 173 KKIEAKKAKAK--------SGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQ 224
KKI+ K A K + KIFVGG+S + +E+KA+F+QFG + ET M D+ +
Sbjct: 294 KKIDPKHATPKNRPRQANKTKKIFVGGVSQDTSADEVKAYFSQFGAVEETVMLMDQQTKR 353
Query: 225 RKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ F F+TFE+E VV + + I +K+V+ KKA PK
Sbjct: 354 HRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPK 392
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 47/82 (57%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GK+FVGGLS + E++K +F FG + + + D + + F FITF+ V +LK
Sbjct: 226 GKLFVGGLSWQTSSEKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVDKVLK 285
Query: 245 NPKQKINDKEVDVKKATPKPEP 266
P ++ K++D K ATPK P
Sbjct: 286 VPIHTLDGKKIDPKHATPKNRP 307
Score = 47.0 bits (110), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 32/44 (72%)
Query: 607 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+E+LKE+F+ +G + +V + DP T RSRGF FI F++ +++K
Sbjct: 239 SEKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVDK 282
Score = 42.4 bits (98), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFYS 660
D +E+K +FS++G +E + D T R RGF F+ F++ + +++ V +++F++
Sbjct: 324 DTSADEVKAYFSQFGAVEETVMLMDQQTKRHRGFGFVTFENEDVVDR--VCEIHFHT 378
>gi|302422014|ref|XP_003008837.1| nuclear polyadenylated RNA-binding protein [Verticillium albo-atrum
VaMs.102]
gi|261351983|gb|EEY14411.1| nuclear polyadenylated RNA-binding protein [Verticillium albo-atrum
VaMs.102]
Length = 473
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 93/150 (62%), Gaps = 2/150 (1%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+ L+++F+++GE+ T+ D TGRSRGF F+ FKD +++ V++ +G +I+ K
Sbjct: 61 QSLRDYFAQFGEVVECTVMRDSTTGRSRGFGFLTFKDAKTVNIVMVKEHFLDGK-IIDPK 119
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
+ + + K+ KIFVGG+S E D+E K +FAQFG +++ + DK + + F F+TF
Sbjct: 120 RAIPRDEQEKTSKIFVGGVSQETTDQEFKDYFAQFGRVVDATLMMDKDTGRPRGFGFVTF 179
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKATPK 263
E E V LK +I+ K ++VKKA P+
Sbjct: 180 ESEEGVDACLKT-HLEIHGKPIEVKKAQPR 208
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 71/122 (58%), Gaps = 8/122 (6%)
Query: 149 KDTESLEKASVEDVIAEGNHVINNKKIEAKKA-----KAKSGKIFVGGLSPEMKDEEIKA 203
+ + SL ++ +++G+ ++N K++ + A+ K+F+GGL+ E D+ ++
Sbjct: 8 RSSTSLPLRRIQPALSDGD--LDNGKLDGRNTLYQSHAARDTKMFIGGLNWETTDQSLRD 65
Query: 204 HFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+FAQFG ++E + D + + + F F+TF+ ++ ++++ + ++ K +D K+A P+
Sbjct: 66 YFAQFGEVVECTVMRDSTTGRSRGFGFLTFK-DAKTVNIVMVKEHFLDGKIIDPKRAIPR 124
Query: 264 PE 265
E
Sbjct: 125 DE 126
Score = 47.0 bits (110), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 34/51 (66%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYF 658
+ L+++F+++GE+ T+ D TGRSRGF F+ FKD +++ V++ +
Sbjct: 61 QSLRDYFAQFGEVVECTVMRDSTTGRSRGFGFLTFKDAKTVNIVMVKEHFL 111
Score = 43.9 bits (102), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 29/42 (69%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLE 649
+E K++F+++G + + TL D +TGR RGF F+ F+ E ++
Sbjct: 145 QEFKDYFAQFGRVVDATLMMDKDTGRPRGFGFVTFESEEGVD 186
>gi|156538565|ref|XP_001607438.1| PREDICTED: hypothetical protein LOC100123736 [Nasonia vitripennis]
Length = 395
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 63/159 (39%), Positives = 92/159 (57%), Gaps = 13/159 (8%)
Query: 113 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINN 172
+E+L+E+F +G + +V + DP T RSRGF FI F E SV+ V+ H ++
Sbjct: 68 SEKLREYFGMFGTVTDVLIMKDPVTQRSRGFGFITFA-----EPGSVDKVLKCPIHTLDG 122
Query: 173 KKIEAKKAKAK--------SGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQ 224
KKI+ K A K + KIFVGG+S + EE+KA+F QFG + ET M D+ +
Sbjct: 123 KKIDPKHATPKNRAKQANRTKKIFVGGVSQDTSSEEVKAYFNQFGKVEETVMLMDQQTKR 182
Query: 225 RKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ F F+TFE+E VV + + I +K+V+ KKA PK
Sbjct: 183 HRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPK 221
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 45/79 (56%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GK+FVGGLS + E+++ +F FG + + + D + + F FITF V +LK
Sbjct: 55 GKLFVGGLSWQTSSEKLREYFGMFGTVTDVLIMKDPVTQRSRGFGFITFAEPGSVDKVLK 114
Query: 245 NPKQKINDKEVDVKKATPK 263
P ++ K++D K ATPK
Sbjct: 115 CPIHTLDGKKIDPKHATPK 133
Score = 46.2 bits (108), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 30/44 (68%)
Query: 607 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+E+L+E+F +G + +V + DP T RSRGF FI F + S++K
Sbjct: 68 SEKLREYFGMFGTVTDVLIMKDPVTQRSRGFGFITFAEPGSVDK 111
Score = 43.1 bits (100), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 38/57 (66%), Gaps = 2/57 (3%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFYS 660
D +EE+K +F+++G++E + D T R RGF F+ F++ + +++ V +++F++
Sbjct: 153 DTSSEEVKAYFNQFGKVEETVMLMDQQTKRHRGFGFVTFENEDVVDR--VCEIHFHT 207
>gi|358396002|gb|EHK45389.1| hypothetical protein TRIATDRAFT_131648 [Trichoderma atroviride IMI
206040]
Length = 405
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 95/150 (63%), Gaps = 2/150 (1%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+ L+++FS++GE+ T+ D ++GRSRGF F+ FKD +++ V++ +G +I+ K
Sbjct: 13 QSLRDYFSQFGEVVECTVMRDSSSGRSRGFGFLTFKDAKTVNIVMVKEHFLDGK-IIDPK 71
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
+ + + K+ KIFVGG+S + D+E + +FAQFG +++ + DK + + F F+TF
Sbjct: 72 RAIPRDEQEKTSKIFVGGVSQDTTDQEFREYFAQFGRVVDATLMMDKDTGRPRGFGFVTF 131
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKATPK 263
E E+ V D N +I+ K ++VKKA P+
Sbjct: 132 ESEAGV-DACINVPLEIHGKPIEVKKAQPR 160
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 187 IFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNP 246
+F+GGL+ E D+ ++ +F+QFG ++E + D S + + F F+TF+ ++ ++++
Sbjct: 1 MFIGGLNWETTDQSLRDYFSQFGEVVECTVMRDSSSGRSRGFGFLTFK-DAKTVNIVMVK 59
Query: 247 KQKINDKEVDVKKATPKPE 265
+ ++ K +D K+A P+ E
Sbjct: 60 EHFLDGKIIDPKRAIPRDE 78
Score = 47.4 bits (111), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 35/51 (68%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYF 658
+ L+++FS++GE+ T+ D ++GRSRGF F+ FKD +++ V++ +
Sbjct: 13 QSLRDYFSQFGEVVECTVMRDSSSGRSRGFGFLTFKDAKTVNIVMVKEHFL 63
Score = 43.9 bits (102), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 29/46 (63%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLE 649
D +E +E+F+++G + + TL D +TGR RGF F+ F+ ++
Sbjct: 93 DTTDQEFREYFAQFGRVVDATLMMDKDTGRPRGFGFVTFESEAGVD 138
>gi|22507308|ref|NP_683688.1| RNA-binding protein Musashi homolog 1 [Rattus norvegicus]
gi|51316134|sp|Q8K3P4.1|MSI1H_RAT RecName: Full=RNA-binding protein Musashi homolog 1;
Short=Musashi-1
gi|22073952|gb|AAK94485.1| RNA-binding protein Musashi-1 [Rattus norvegicus]
Length = 362
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 99/167 (59%), Gaps = 15/167 (8%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + T+E L+E+F ++GE++ + DP T RSRGF F+ F D +A V+ V+A+
Sbjct: 26 GLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMD-----QAGVDKVLAQ 80
Query: 166 GNHVINNKKIEAK---------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEM 216
H +++K I+ K K ++ KIFVGGLS E++K +F QFG + + +
Sbjct: 81 SRHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKHYFEQFGKVDDAML 140
Query: 217 PYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+DK+ ++ + F F+TFE E +V + + +IN+K V+ KKA PK
Sbjct: 141 MFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPK 187
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 44/78 (56%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+F+GGLS + E ++ +F QFG + E + D + + F F+TF ++ V +L
Sbjct: 21 KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 80
Query: 246 PKQKINDKEVDVKKATPK 263
+ +++ K +D K A P+
Sbjct: 81 SRHELDSKTIDPKVAFPR 98
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
G+ + T+E L+E+F ++GE++ + DP T RSRGF F+ F D ++K
Sbjct: 26 GLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDK 76
Score = 42.4 bits (98), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Query: 603 VDKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFY 659
V+ E++K +F ++G++++ L D T R RGF F+ F+ + +EK V +++F+
Sbjct: 118 VNTTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEK--VCEIHFH 172
Score = 40.0 bits (92), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 30/46 (65%)
Query: 452 YDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 497
+DK+ ++ + F F+TFE E +V + + +IN+K V+ KKA PK
Sbjct: 142 FDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPK 187
>gi|6678940|ref|NP_032655.1| RNA-binding protein Musashi homolog 1 [Mus musculus]
gi|51316207|sp|Q61474.1|MSI1H_MOUSE RecName: Full=RNA-binding protein Musashi homolog 1;
Short=Musashi-1
gi|1434857|dbj|BAA08530.1| RNA-binding protein [Mus musculus]
gi|147897761|gb|AAI40423.1| Musashi homolog 1(Drosophila) [synthetic construct]
gi|148921876|gb|AAI46539.1| Musashi homolog 1(Drosophila) [synthetic construct]
Length = 362
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 99/167 (59%), Gaps = 15/167 (8%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + T+E L+E+F ++GE++ + DP T RSRGF F+ F D +A V+ V+A+
Sbjct: 26 GLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMD-----QAGVDKVLAQ 80
Query: 166 GNHVINNKKIEAK---------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEM 216
H +++K I+ K K ++ KIFVGGLS E++K +F QFG + + +
Sbjct: 81 SRHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKHYFEQFGKVDDAML 140
Query: 217 PYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+DK+ ++ + F F+TFE E +V + + +IN+K V+ KKA PK
Sbjct: 141 MFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPK 187
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 44/78 (56%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+F+GGLS + E ++ +F QFG + E + D + + F F+TF ++ V +L
Sbjct: 21 KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 80
Query: 246 PKQKINDKEVDVKKATPK 263
+ +++ K +D K A P+
Sbjct: 81 SRHELDSKTIDPKVAFPR 98
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
G+ + T+E L+E+F ++GE++ + DP T RSRGF F+ F D ++K
Sbjct: 26 GLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDK 76
Score = 42.4 bits (98), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Query: 603 VDKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFY 659
V+ E++K +F ++G++++ L D T R RGF F+ F+ + +EK V +++F+
Sbjct: 118 VNTTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEK--VCEIHFH 172
Score = 40.0 bits (92), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 30/46 (65%)
Query: 452 YDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 497
+DK+ ++ + F F+TFE E +V + + +IN+K V+ KKA PK
Sbjct: 142 FDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPK 187
>gi|151945512|gb|EDN63753.1| cleavage and polyadenylation factor CF I component involved in
pre-mRNA 3'-end processing [Saccharomyces cerevisiae
YJM789]
gi|190407229|gb|EDV10496.1| nuclear polyadenylated RNA-binding protein 4 [Saccharomyces
cerevisiae RM11-1a]
gi|207341455|gb|EDZ69508.1| YOL123Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256270127|gb|EEU05357.1| Hrp1p [Saccharomyces cerevisiae JAY291]
Length = 534
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 98/163 (60%), Gaps = 12/163 (7%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ TE+ L+E+F KYG + ++ + DP TGRSRGF F+ F EK S D + +
Sbjct: 165 GLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSF------EKPSSVDEVVK 218
Query: 166 GNHVINNKKIEAKKA-----KAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDK 220
H+++ K I+ K+A + K+GKIFVGG+ P+++ +E + F+Q+G II+ ++ DK
Sbjct: 219 TQHILDGKVIDPKRAIPRDEQDKTGKIFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDK 278
Query: 221 SKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
Q + F F+T++ V + +N D+++++K+A P+
Sbjct: 279 DTGQSRGFGFVTYDSADAVDRVCQNKFIDFKDRKIEIKRAEPR 321
Score = 47.0 bits (110), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D + L+E+F KYG + ++ + DP TGRSRGF F+ F+ S+++
Sbjct: 169 DTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVDE 215
Score = 46.6 bits (109), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 57/98 (58%), Gaps = 3/98 (3%)
Query: 170 INNKKIEAKKA--KAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKN 227
+ K E KA +S K+F+GGL+ + ++ ++ +F ++G + + ++ D + + +
Sbjct: 142 VTQTKEERSKADLSKESCKMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRG 201
Query: 228 FCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE 265
F F++FE S V +++K + ++ K +D K+A P+ E
Sbjct: 202 FGFLSFEKPSSVDEVVKT-QHILDGKVIDPKRAIPRDE 238
>gi|116197887|ref|XP_001224755.1| hypothetical protein CHGG_07099 [Chaetomium globosum CBS 148.51]
gi|88178378|gb|EAQ85846.1| hypothetical protein CHGG_07099 [Chaetomium globosum CBS 148.51]
Length = 886
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 98/166 (59%), Gaps = 7/166 (4%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+ L+++FS++GE+ T+ D TGRSRGF F+ FKD +++ V++ +G +I+ K
Sbjct: 403 QSLRDYFSQFGEVLECTVMRDGATGRSRGFGFLTFKDPKTVNIVMVKEHYLDGK-IIDPK 461
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
+ + + K+ KIFVGG+S E D E + +FAQFG +++ + DK + + F F+TF
Sbjct: 462 RAIPRDEQEKTSKIFVGGVSQETTDHEFREYFAQFGRVVDATLMMDKDTGRPRGFGFVTF 521
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKATPK-----PEPFGVRGGRG 274
E E+ V L P + I+ K ++VKKA P+ E RGG G
Sbjct: 522 ESEAGVDACLATPLE-IHGKPIEVKKAQPRGNLRDEEDAARRGGAG 566
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 63/117 (53%), Gaps = 1/117 (0%)
Query: 149 KDTESLEKASVEDVIAEGNHVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQF 208
+D S ++A + +++ + N + K+F+GGL+ E D+ ++ +F+QF
Sbjct: 353 RDFRSNDRADLRVDVSQHKTMENTTPDHGDNFGENTRKMFIGGLNWETTDQSLRDYFSQF 412
Query: 209 GNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE 265
G ++E + D + + + F F+TF+ + ++++ + ++ K +D K+A P+ E
Sbjct: 413 GEVLECTVMRDGATGRSRGFGFLTFK-DPKTVNIVMVKEHYLDGKIIDPKRAIPRDE 468
Score = 47.8 bits (112), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 34/51 (66%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYF 658
+ L+++FS++GE+ T+ D TGRSRGF F+ FKD +++ V++ Y
Sbjct: 403 QSLRDYFSQFGEVLECTVMRDGATGRSRGFGFLTFKDPKTVNIVMVKEHYL 453
Score = 42.0 bits (97), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 30/44 (68%), Gaps = 1/44 (2%)
Query: 601 GIVDKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFK 643
G+ + T+ E +E+F+++G + + TL D +TGR RGF F+ F+
Sbjct: 479 GVSQETTDHEFREYFAQFGRVVDATLMMDKDTGRPRGFGFVTFE 522
>gi|358367583|dbj|GAA84201.1| heterogeneous nuclear ribonucleoprotein Hrp1 [Aspergillus kawachii
IFO 4308]
Length = 471
Score = 109 bits (272), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 55/150 (36%), Positives = 92/150 (61%), Gaps = 2/150 (1%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+ LK++FS++GE++ T+ D TGRSRGF F+ F+D +++ V++ +G +I+ K
Sbjct: 13 QSLKDYFSQFGEVQECTVMRDSATGRSRGFGFLTFRDPKTVNTVMVKEHYLDG-KIIDPK 71
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
+ + + K+ KIFVGG+S E + + K FAQFG +I+ + DK + + F F+TF
Sbjct: 72 RAIPRDEQEKTSKIFVGGVSQEANEHDFKEFFAQFGRVIDATLMIDKDTGRPRGFGFVTF 131
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ E+ V L P + I K ++VKKA P+
Sbjct: 132 DSEAAVEAALSGPLE-ICGKPIEVKKAQPR 160
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 35/51 (68%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYF 658
+ LK++FS++GE++ T+ D TGRSRGF F+ F+D +++ V++ Y
Sbjct: 13 QSLKDYFSQFGEVQECTVMRDSATGRSRGFGFLTFRDPKTVNTVMVKEHYL 63
Score = 48.5 bits (114), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 187 IFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNP 246
+F+GGL+ E D+ +K +F+QFG + E + D + + + F F+TF V ++
Sbjct: 1 MFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDSATGRSRGFGFLTFRDPKTVNTVMVK- 59
Query: 247 KQKINDKEVDVKKATPKPE 265
+ ++ K +D K+A P+ E
Sbjct: 60 EHYLDGKIIDPKRAIPRDE 78
Score = 42.7 bits (99), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 601 GIVDKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
G+ + E + KE F+++G + + TL D +TGR RGF F+ F ++E A
Sbjct: 89 GVSQEANEHDFKEFFAQFGRVIDATLMIDKDTGRPRGFGFVTFDSEAAVEAA 140
>gi|259149364|emb|CAY86168.1| Hrp1p [Saccharomyces cerevisiae EC1118]
Length = 534
Score = 109 bits (272), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 98/163 (60%), Gaps = 12/163 (7%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ TE+ L+E+F KYG + ++ + DP TGRSRGF F+ F EK S D + +
Sbjct: 165 GLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSF------EKPSSVDEVVK 218
Query: 166 GNHVINNKKIEAKKA-----KAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDK 220
H+++ K I+ K+A + K+GKIFVGG+ P+++ +E + F+Q+G II+ ++ DK
Sbjct: 219 TQHILDGKVIDPKRAIPRDEQDKTGKIFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDK 278
Query: 221 SKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
Q + F F+T++ V + +N D+++++K+A P+
Sbjct: 279 DTGQSRGFGFVTYDSADAVDRVCQNKFIDFKDRKIEIKRAEPR 321
Score = 47.0 bits (110), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D + L+E+F KYG + ++ + DP TGRSRGF F+ F+ S+++
Sbjct: 169 DTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVDE 215
Score = 46.6 bits (109), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 57/98 (58%), Gaps = 3/98 (3%)
Query: 170 INNKKIEAKKA--KAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKN 227
+ K E KA +S K+F+GGL+ + ++ ++ +F ++G + + ++ D + + +
Sbjct: 142 VTQTKEERSKADLSKESCKMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRG 201
Query: 228 FCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE 265
F F++FE S V +++K + ++ K +D K+A P+ E
Sbjct: 202 FGFLSFEKPSSVDEVVKT-QHILDGKVIDPKRAIPRDE 238
>gi|223647556|gb|ACN10536.1| Heterogeneous nuclear ribonucleoprotein A/B [Salmo salar]
Length = 344
Score = 109 bits (272), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 60/153 (39%), Positives = 93/153 (60%), Gaps = 9/153 (5%)
Query: 115 ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNKK 174
+LK++FSK+GE+ + T+K D TGRSRGF FI+FK E SV+ V+ + H ++ ++
Sbjct: 96 DLKDYFSKFGEVTDCTIKMDQQTGRSRGFGFILFK-----EAVSVDKVLEQKEHRLDGRQ 150
Query: 175 IEAKKAKAKSG----KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCF 230
I+ KKA A KIFVGGL+P+ E I+ +F FG I E+P D +R+ F F
Sbjct: 151 IDPKKAMAMKKEPVKKIFVGGLNPDTDKEVIQEYFGTFGEIETIELPQDPKTEKRRGFVF 210
Query: 231 ITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
IT++ E+ V +L+ ++ + ++K A PK
Sbjct: 211 ITYKDETPVKKVLEKKFHNVSGSKCEIKIAQPK 243
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 67/129 (51%), Gaps = 8/129 (6%)
Query: 146 IVFKDTESLEKASVEDVIA-EGNHVINNK------KIEAKKAKAKSGKIFVGGLSPEMKD 198
+ E +A +ED A EG N +I A K + +GK+FVGGLS +
Sbjct: 35 VTLNKGEEETEACIEDETAVEGEDSQNGATEGEGGQINASKGEEDAGKMFVGGLSWDTSK 94
Query: 199 EEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVK 258
+++K +F++FG + + + D+ + + F FI F+ V +L+ + +++ +++D K
Sbjct: 95 KDLKDYFSKFGEVTDCTIKMDQQTGRSRGFGFILFKEAVSVDKVLEQKEHRLDGRQIDPK 154
Query: 259 KATP-KPEP 266
KA K EP
Sbjct: 155 KAMAMKKEP 163
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 36/47 (76%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D ++LK++FSK+GE+ + T+K D TGRSRGF FI+FK+ S++K
Sbjct: 91 DTSKKDLKDYFSKFGEVTDCTIKMDQQTGRSRGFGFILFKEAVSVDK 137
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 29/47 (61%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D E ++E+F +GEIE + L DP T + RGF FI +KD ++K
Sbjct: 175 DTDKEVIQEYFGTFGEIETIELPQDPKTEKRRGFVFITYKDETPVKK 221
>gi|6324449|ref|NP_014518.1| Hrp1p [Saccharomyces cerevisiae S288c]
gi|2500574|sp|Q99383.1|HRP1_YEAST RecName: Full=Nuclear polyadenylated RNA-binding protein 4;
AltName: Full=Cleavage factor IB; Short=CFIB
gi|1016290|gb|AAA79097.1| nuclear polyadenylated RNA-binding protein [Saccharomyces
cerevisiae]
gi|1420003|emb|CAA99142.1| HRP1 [Saccharomyces cerevisiae]
gi|1550721|emb|CAA64546.1| RNA binding protein [Saccharomyces cerevisiae]
gi|1657691|gb|AAB18142.1| Hrp1p [Saccharomyces cerevisiae]
gi|285814768|tpg|DAA10661.1| TPA: Hrp1p [Saccharomyces cerevisiae S288c]
gi|349581049|dbj|GAA26207.1| K7_Hrp1p [Saccharomyces cerevisiae Kyokai no. 7]
gi|392296592|gb|EIW07694.1| Hrp1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 534
Score = 109 bits (272), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 98/163 (60%), Gaps = 12/163 (7%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ TE+ L+E+F KYG + ++ + DP TGRSRGF F+ F EK S D + +
Sbjct: 165 GLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSF------EKPSSVDEVVK 218
Query: 166 GNHVINNKKIEAKKA-----KAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDK 220
H+++ K I+ K+A + K+GKIFVGG+ P+++ +E + F+Q+G II+ ++ DK
Sbjct: 219 TQHILDGKVIDPKRAIPRDEQDKTGKIFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDK 278
Query: 221 SKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
Q + F F+T++ V + +N D+++++K+A P+
Sbjct: 279 DTGQSRGFGFVTYDSADAVDRVCQNKFIDFKDRKIEIKRAEPR 321
Score = 47.0 bits (110), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D + L+E+F KYG + ++ + DP TGRSRGF F+ F+ S+++
Sbjct: 169 DTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVDE 215
Score = 46.6 bits (109), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 57/98 (58%), Gaps = 3/98 (3%)
Query: 170 INNKKIEAKKA--KAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKN 227
+ K E KA +S K+F+GGL+ + ++ ++ +F ++G + + ++ D + + +
Sbjct: 142 VTQTKEERSKADLSKESCKMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRG 201
Query: 228 FCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE 265
F F++FE S V +++K + ++ K +D K+A P+ E
Sbjct: 202 FGFLSFEKPSSVDEVVKT-QHILDGKVIDPKRAIPRDE 238
>gi|67900918|ref|XP_680715.1| hypothetical protein AN7446.2 [Aspergillus nidulans FGSC A4]
gi|40742836|gb|EAA62026.1| hypothetical protein AN7446.2 [Aspergillus nidulans FGSC A4]
Length = 448
Score = 109 bits (272), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 92/150 (61%), Gaps = 2/150 (1%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+ LKE+FS++GE++ T+ D TGRSRGF F+ FKD +++ V++ +G +I+ K
Sbjct: 13 QSLKEYFSQFGEVQECTVMRDSATGRSRGFGFLTFKDPKTVNTVMVKEHYLDGK-IIDPK 71
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
+ + + K+ KIFVGG+S E +++ K F QFG +I+ + DK + + F F+TF
Sbjct: 72 RAIPRDEQEKTSKIFVGGVSQEATEQDFKQFFMQFGRVIDATLMIDKDTGRPRGFGFVTF 131
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ E+ V L P + I K ++VKKA P+
Sbjct: 132 DSEAAVEAALSRPLE-ILGKTIEVKKAQPR 160
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 35/51 (68%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYF 658
+ LKE+FS++GE++ T+ D TGRSRGF F+ FKD +++ V++ Y
Sbjct: 13 QSLKEYFSQFGEVQECTVMRDSATGRSRGFGFLTFKDPKTVNTVMVKEHYL 63
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 187 IFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNP 246
+F+GGL+ E D+ +K +F+QFG + E + D + + + F F+TF+ V ++
Sbjct: 1 MFIGGLNWETTDQSLKEYFSQFGEVQECTVMRDSATGRSRGFGFLTFKDPKTVNTVMVK- 59
Query: 247 KQKINDKEVDVKKATPKPE 265
+ ++ K +D K+A P+ E
Sbjct: 60 EHYLDGKIIDPKRAIPRDE 78
Score = 42.4 bits (98), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
G+ + TE+ K+ F ++G + + TL D +TGR RGF F+ F ++E A
Sbjct: 89 GVSQEATEQDFKQFFMQFGRVIDATLMIDKDTGRPRGFGFVTFDSEAAVEAA 140
>gi|323307358|gb|EGA60637.1| Hrp1p [Saccharomyces cerevisiae FostersO]
Length = 534
Score = 109 bits (272), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 98/163 (60%), Gaps = 12/163 (7%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ TE+ L+E+F KYG + ++ + DP TGRSRGF F+ F EK S D + +
Sbjct: 165 GLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSF------EKPSSVDEVVK 218
Query: 166 GNHVINNKKIEAKKA-----KAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDK 220
H+++ K I+ K+A + K+GKIFVGG+ P+++ +E + F+Q+G II+ ++ DK
Sbjct: 219 TQHILDGKVIDPKRAIPRDEQDKTGKIFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDK 278
Query: 221 SKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
Q + F F+T++ V + +N D+++++K+A P+
Sbjct: 279 DTGQSRGFGFVTYDSADAVDRVCQNKFIDFKDRKIEIKRAEPR 321
Score = 47.0 bits (110), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D + L+E+F KYG + ++ + DP TGRSRGF F+ F+ S+++
Sbjct: 169 DTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVDE 215
Score = 46.6 bits (109), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 57/98 (58%), Gaps = 3/98 (3%)
Query: 170 INNKKIEAKKA--KAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKN 227
+ K E KA +S K+F+GGL+ + ++ ++ +F ++G + + ++ D + + +
Sbjct: 142 VTQTKEERSKADLSKESCKMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRG 201
Query: 228 FCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE 265
F F++FE S V +++K + ++ K +D K+A P+ E
Sbjct: 202 FGFLSFEKPSSVDEVVKT-QHILDGKVIDPKRAIPRDE 238
>gi|301790887|ref|XP_002930448.1| PREDICTED: RNA-binding protein Musashi homolog 1-like [Ailuropoda
melanoleuca]
Length = 360
Score = 109 bits (272), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 94/159 (59%), Gaps = 14/159 (8%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
E L+E+F ++GE++ + DP T RSRGF F+ F D +A V+ V+A+ H +++K
Sbjct: 32 EGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMD-----QAGVDKVLAQSRHELDSK 86
Query: 174 KIEAK---------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQ 224
I+ K K ++ KIFVGGLS E++K +F QFG + + + +DK+ ++
Sbjct: 87 TIDPKVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNR 146
Query: 225 RKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ F F+TFE E +V + + +IN+K V+ KKA PK
Sbjct: 147 HRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPK 185
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 44/75 (58%), Gaps = 5/75 (6%)
Query: 109 VHKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNH 168
V+ E++K++F ++G++++ L D T R RGF F+ F+ + +EK V H
Sbjct: 116 VNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEK-----VCEIHFH 170
Query: 169 VINNKKIEAKKAKAK 183
INNK +E KKA+ K
Sbjct: 171 EINNKMVECKKAQPK 185
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 28/43 (65%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
E L+E+F ++GE++ + DP T RSRGF F+ F D ++K
Sbjct: 32 EGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDK 74
Score = 43.5 bits (101), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 37/57 (64%), Gaps = 2/57 (3%)
Query: 603 VDKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFY 659
V+ E++K++F ++G++++ L D T R RGF F+ F+ + +EK V +++F+
Sbjct: 116 VNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEK--VCEIHFH 170
Score = 40.0 bits (92), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 30/46 (65%)
Query: 452 YDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 497
+DK+ ++ + F F+TFE E +V + + +IN+K V+ KKA PK
Sbjct: 140 FDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPK 185
>gi|365763141|gb|EHN04671.1| Hrp1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 534
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 98/163 (60%), Gaps = 12/163 (7%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ TE+ L+E+F KYG + ++ + DP TGRSRGF F+ F EK S D + +
Sbjct: 165 GLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSF------EKPSSVDEVVK 218
Query: 166 GNHVINNKKIEAKKA-----KAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDK 220
H+++ K I+ K+A + K+GKIFVGG+ P+++ +E + F+Q+G II+ ++ DK
Sbjct: 219 TQHILDGKVIDPKRAIPRDEQDKTGKIFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDK 278
Query: 221 SKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
Q + F F+T++ V + +N D+++++K+A P+
Sbjct: 279 DTGQSRGFGFVTYDSADAVDRVCQNKFIDFKDRKIEIKRAEPR 321
Score = 47.0 bits (110), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D + L+E+F KYG + ++ + DP TGRSRGF F+ F+ S+++
Sbjct: 169 DTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVDE 215
Score = 46.6 bits (109), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 57/98 (58%), Gaps = 3/98 (3%)
Query: 170 INNKKIEAKKA--KAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKN 227
+ K E KA +S K+F+GGL+ + ++ ++ +F ++G + + ++ D + + +
Sbjct: 142 VTQTKEERSKADLSKESCKMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRG 201
Query: 228 FCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE 265
F F++FE S V +++K + ++ K +D K+A P+ E
Sbjct: 202 FGFLSFEKPSSVDEVVKT-QHILDGKVIDPKRAIPRDE 238
>gi|353241965|emb|CCA73743.1| probable heterogeneous nuclear ribonucleoprotein HRP1
[Piriformospora indica DSM 11827]
Length = 343
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 91/150 (60%), Gaps = 2/150 (1%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+ L+ +FS++G +E T+ DP GRSRGFAF+ F+D ++ K V++ +G +I+ K
Sbjct: 13 DGLRNYFSQFGRVEACTIMRDP-AGRSRGFAFLTFEDPAAVNKVMVQEHYLDGK-IIDPK 70
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
+ + ++ K+FVGGL+P + +E +K +F QFG +I+ + D+ S+ K F F+TF
Sbjct: 71 RAIPRTEHQRTVKMFVGGLAPSVTNEGLKEYFGQFGKVIDATVMVDRDSSRSKGFGFVTF 130
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ +S L P I+ K ++VK A P+
Sbjct: 131 DDQSGAERLFGMPGLAIDGKTIEVKMAQPR 160
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYF 658
D + L+ +FS++G +E T+ DP GRSRGFAF+ F+D ++ K V++ Y
Sbjct: 9 DTTDDGLRNYFSQFGRVEACTIMRDP-AGRSRGFAFLTFEDPAAVNKVMVQEHYL 62
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 45/80 (56%), Gaps = 6/80 (7%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ +T E LKE+F ++G++ + T+ D ++ RS+GF F+ F D ++ E +
Sbjct: 88 GLAPSVTNEGLKEYFGQFGKVIDATVMVDRDSSRSKGFGFVTFDD-----QSGAERLFGM 142
Query: 166 GNHVINNKKIEAKKAKAKSG 185
I+ K IE K A+ ++G
Sbjct: 143 PGLAIDGKTIEVKMAQPRAG 162
Score = 45.8 bits (107), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 187 IFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNP 246
+FVGGL+ + D+ ++ +F+QFG + + D + R F F+TFE + V ++
Sbjct: 1 MFVGGLNWDTTDDGLRNYFSQFGRVEACTIMRDPAGRSR-GFAFLTFEDPAAVNKVMVQ- 58
Query: 247 KQKINDKEVDVKKATPKPE 265
+ ++ K +D K+A P+ E
Sbjct: 59 EHYLDGKIIDPKRAIPRTE 77
Score = 43.1 bits (100), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
G+ +T E LKE+F ++G++ + T+ D ++ RS+GF F+ F D E+
Sbjct: 88 GLAPSVTNEGLKEYFGQFGKVIDATVMVDRDSSRSKGFGFVTFDDQSGAER 138
Score = 38.9 bits (89), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 30/54 (55%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 497
++I+ + D+ S+ K F F+TF+ +S L P I+ K ++VK A P+
Sbjct: 107 KVIDATVMVDRDSSRSKGFGFVTFDDQSGAERLFGMPGLAIDGKTIEVKMAQPR 160
>gi|134057544|emb|CAK48898.1| unnamed protein product [Aspergillus niger]
Length = 471
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 55/150 (36%), Positives = 92/150 (61%), Gaps = 2/150 (1%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+ LK++FS++GE++ T+ D TGRSRGF F+ F+D +++ V++ +G +I+ K
Sbjct: 13 QSLKDYFSQFGEVQECTVMRDSATGRSRGFGFLTFRDPKTVNTVMVKEHYLDG-KIIDPK 71
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
+ + + K+ KIFVGG+S E + + K FAQFG +I+ + DK + + F F+TF
Sbjct: 72 RAIPRDEQEKTSKIFVGGVSQEANEHDFKEFFAQFGRVIDATLMIDKDTGRPRGFGFVTF 131
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ E+ V L P + I K ++VKKA P+
Sbjct: 132 DSEAAVEAALSGPLE-ICGKPIEVKKAQPR 160
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 35/51 (68%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYF 658
+ LK++FS++GE++ T+ D TGRSRGF F+ F+D +++ V++ Y
Sbjct: 13 QSLKDYFSQFGEVQECTVMRDSATGRSRGFGFLTFRDPKTVNTVMVKEHYL 63
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 187 IFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNP 246
+F+GGL+ E D+ +K +F+QFG + E + D + + + F F+TF V ++
Sbjct: 1 MFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDSATGRSRGFGFLTFRDPKTVNTVMVK- 59
Query: 247 KQKINDKEVDVKKATPKPE 265
+ ++ K +D K+A P+ E
Sbjct: 60 EHYLDGKIIDPKRAIPRDE 78
Score = 42.4 bits (98), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 601 GIVDKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
G+ + E + KE F+++G + + TL D +TGR RGF F+ F ++E A
Sbjct: 89 GVSQEANEHDFKEFFAQFGRVIDATLMIDKDTGRPRGFGFVTFDSEAAVEAA 140
>gi|149241445|ref|XP_001526315.1| hypothetical protein LELG_02873 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146450438|gb|EDK44694.1| hypothetical protein LELG_02873 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 548
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 64/163 (39%), Positives = 95/163 (58%), Gaps = 12/163 (7%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ TEE L EHF KYGE+ + T+ D TGRSRGF F+ FKD ASV+ VI E
Sbjct: 210 GLNWDTTEEGLAEHFRKYGEVVDYTIMKDNATGRSRGFGFLTFKD-----PASVDAVIKE 264
Query: 166 GNHVINNKKIEAKKAKAKS-----GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDK 220
H+++ K I+ K+A A+ GKIFVGG+ P + + E F++FG+II+ ++ DK
Sbjct: 265 -EHILDGKLIDPKRAIAREDQDRVGKIFVGGIDPMVTEREFNEFFSKFGSIIDCQLMIDK 323
Query: 221 SKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ + F FIT++ V + N + K ++VK+A P+
Sbjct: 324 DTGRSRGFGFITYDSPDAVDKVCVNKYLTLKGKAMEVKRAAPR 366
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 30/46 (65%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLE 649
D E L EHF KYGE+ + T+ D TGRSRGF F+ FKD S++
Sbjct: 214 DTTEEGLAEHFRKYGEVVDYTIMKDNATGRSRGFGFLTFKDPASVD 259
Score = 45.8 bits (107), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Query: 601 GIVDKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASV 653
GI +TE E E FSK+G I + L D +TGRSRGF FI + ++++K V
Sbjct: 294 GIDPMVTEREFNEFFSKFGSIIDCQLMIDKDTGRSRGFGFITYDSPDAVDKVCV 347
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 184 SGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLL 243
SGK+F+GGL+ + +E + HF ++G +++ + D + + + F F+TF+ + V ++
Sbjct: 203 SGKMFIGGLNWDTTEEGLAEHFRKYGEVVDYTIMKDNATGRSRGFGFLTFKDPASVDAVI 262
Query: 244 KNPKQKINDKEVDVKKA 260
K + ++ K +D K+A
Sbjct: 263 KE-EHILDGKLIDPKRA 278
>gi|400601150|gb|EJP68793.1| RNA recognition domain-containing protein [Beauveria bassiana ARSEF
2860]
Length = 522
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 55/150 (36%), Positives = 95/150 (63%), Gaps = 2/150 (1%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+ L+++FS++GE+ T+ D NTGRSRGF F+ FKD +++ V++ +G +I+ K
Sbjct: 130 QSLRDYFSQFGEVVECTVMRDSNTGRSRGFGFLTFKDAKTVNIVMVKEHYLDG-KIIDPK 188
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
+ + + K+ KIFVGG+S + D+E + FAQFG +I+ + DK + + F F+TF
Sbjct: 189 RAIPRDEQEKTSKIFVGGVSQDTTDQEFRDFFAQFGRVIDATLMMDKDTGRPRGFGFVTF 248
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKATPK 263
E E+ V + + P + I+ K ++VK+A P+
Sbjct: 249 ESEAGVDNCISIPLE-IHGKPIEVKRAQPR 277
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 56/88 (63%), Gaps = 2/88 (2%)
Query: 179 KAKAKS-GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHES 237
KA AK GK+F+GGL+ E D+ ++ +F+QFG ++E + D + + + F F+TF+ ++
Sbjct: 109 KASAKDDGKMFIGGLNWETTDQSLRDYFSQFGEVVECTVMRDSNTGRSRGFGFLTFK-DA 167
Query: 238 VVIDLLKNPKQKINDKEVDVKKATPKPE 265
++++ + ++ K +D K+A P+ E
Sbjct: 168 KTVNIVMVKEHYLDGKIIDPKRAIPRDE 195
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 35/51 (68%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYF 658
+ L+++FS++GE+ T+ D NTGRSRGF F+ FKD +++ V++ Y
Sbjct: 130 QSLRDYFSQFGEVVECTVMRDSNTGRSRGFGFLTFKDAKTVNIVMVKEHYL 180
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 26/40 (65%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFK 643
D +E ++ F+++G + + TL D +TGR RGF F+ F+
Sbjct: 210 DTTDQEFRDFFAQFGRVIDATLMMDKDTGRPRGFGFVTFE 249
>gi|327282602|ref|XP_003226031.1| PREDICTED: RNA-binding protein Musashi homolog 1-like isoform 1
[Anolis carolinensis]
Length = 352
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 99/167 (59%), Gaps = 15/167 (8%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + T+E L+E+F ++GE++ + DP T RSRGF F+ F D +A V+ V+A+
Sbjct: 27 GLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFVD-----QAGVDKVLAQ 81
Query: 166 GNHVINNKKIEAK---------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEM 216
H +++K I+ K K ++ KIFVGGLS E++K +F QFG + + +
Sbjct: 82 SRHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDAML 141
Query: 217 PYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+DK+ ++ + F F+TFE E +V + + +IN+K V+ KKA PK
Sbjct: 142 MFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPK 188
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 44/78 (56%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+F+GGLS + E ++ +F QFG + E + D + + F F+TF ++ V +L
Sbjct: 22 KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFVDQAGVDKVLAQ 81
Query: 246 PKQKINDKEVDVKKATPK 263
+ +++ K +D K A P+
Sbjct: 82 SRHELDSKTIDPKVAFPR 99
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 28/43 (65%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
E L+E+F ++GE++ + DP T RSRGF F+ F D ++K
Sbjct: 35 EGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFVDQAGVDK 77
Score = 43.1 bits (100), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 37/57 (64%), Gaps = 2/57 (3%)
Query: 603 VDKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFY 659
V+ E++K++F ++G++++ L D T R RGF F+ F+ + +EK V +++F+
Sbjct: 119 VNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEK--VCEIHFH 173
Score = 39.7 bits (91), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 30/46 (65%)
Query: 452 YDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 497
+DK+ ++ + F F+TFE E +V + + +IN+K V+ KKA PK
Sbjct: 143 FDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPK 188
>gi|255948100|ref|XP_002564817.1| Pc22g08010 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211591834|emb|CAP98089.1| Pc22g08010 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 456
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 62/178 (34%), Positives = 101/178 (56%), Gaps = 13/178 (7%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
E L+++FS++GE++ T+ D TGRSRGF F+ F+D +++ V++ +G +I+ K
Sbjct: 13 ESLRDYFSQFGEVQECTVMRDSATGRSRGFGFLTFRDAKTVNTVMVKEHYLDGK-IIDPK 71
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
+ + + K+ KIFVGG+S E +++ K F QFG +++ + DK + + F F+TF
Sbjct: 72 RAIPRDEQEKTSKIFVGGVSQEATEQDFKQFFMQFGRVVDATLMMDKDTGRPRGFGFVTF 131
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGVRGGRGG-RGGRGGRGGRMAGGY 290
+ ++ V L P + I K ++VKKA P RG R RGG AGGY
Sbjct: 132 DGDAAVEKALSRPLE-ILGKPIEVKKAQP----------RGNLRENNDQRGGHRAGGY 178
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 35/51 (68%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYF 658
E L+++FS++GE++ T+ D TGRSRGF F+ F+D +++ V++ Y
Sbjct: 13 ESLRDYFSQFGEVQECTVMRDSATGRSRGFGFLTFRDAKTVNTVMVKEHYL 63
Score = 48.5 bits (114), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 187 IFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNP 246
+F+GGL+ E DE ++ +F+QFG + E + D + + + F F+TF V ++
Sbjct: 1 MFIGGLNWETTDESLRDYFSQFGEVQECTVMRDSATGRSRGFGFLTFRDAKTVNTVMVK- 59
Query: 247 KQKINDKEVDVKKATPKPE 265
+ ++ K +D K+A P+ E
Sbjct: 60 EHYLDGKIIDPKRAIPRDE 78
Score = 44.7 bits (104), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
G+ + TE+ K+ F ++G + + TL D +TGR RGF F+ F ++EKA
Sbjct: 89 GVSQEATEQDFKQFFMQFGRVVDATLMMDKDTGRPRGFGFVTFDGDAAVEKA 140
>gi|281340836|gb|EFB16420.1| hypothetical protein PANDA_020894 [Ailuropoda melanoleuca]
Length = 329
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 94/159 (59%), Gaps = 14/159 (8%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
E L+E+F ++GE++ + DP T RSRGF F+ F D +A V+ V+A+ H +++K
Sbjct: 1 EGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMD-----QAGVDKVLAQSRHELDSK 55
Query: 174 KIEAK---------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQ 224
I+ K K ++ KIFVGGLS E++K +F QFG + + + +DK+ ++
Sbjct: 56 TIDPKVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNR 115
Query: 225 RKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ F F+TFE E +V + + +IN+K V+ KKA PK
Sbjct: 116 HRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPK 154
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 44/75 (58%), Gaps = 5/75 (6%)
Query: 109 VHKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNH 168
V+ E++K++F ++G++++ L D T R RGF F+ F+ + +EK V H
Sbjct: 85 VNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEK-----VCEIHFH 139
Query: 169 VINNKKIEAKKAKAK 183
INNK +E KKA+ K
Sbjct: 140 EINNKMVECKKAQPK 154
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 28/43 (65%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
E L+E+F ++GE++ + DP T RSRGF F+ F D ++K
Sbjct: 1 EGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDK 43
Score = 43.1 bits (100), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 37/57 (64%), Gaps = 2/57 (3%)
Query: 603 VDKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFY 659
V+ E++K++F ++G++++ L D T R RGF F+ F+ + +EK V +++F+
Sbjct: 85 VNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEK--VCEIHFH 139
Score = 40.0 bits (92), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 30/46 (65%)
Query: 452 YDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 497
+DK+ ++ + F F+TFE E +V + + +IN+K V+ KKA PK
Sbjct: 109 FDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPK 154
>gi|312378143|gb|EFR24795.1| hypothetical protein AND_10386 [Anopheles darlingi]
Length = 486
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 62/160 (38%), Positives = 94/160 (58%), Gaps = 14/160 (8%)
Query: 113 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINN 172
+E+L E+F +G + +V + DP T RSRGF FI F++ S++K V+ H ++
Sbjct: 124 SEKLSEYFGMFGTVTDVLIMKDPVTQRSRGFGFITFQEPNSVDK-----VLQVPIHTLDG 178
Query: 173 KKIEAKKAKAK---------SGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKS 223
KKI+ K A K + KIFVGG+S + EE+KA+F+QFG + ET M D+
Sbjct: 179 KKIDPKHATPKNRPKTQSNKTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTK 238
Query: 224 QRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ + F F+TFE+E VV + + I +K+V+ KKA PK
Sbjct: 239 RHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPK 278
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 47/82 (57%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GK+FVGGLS + E++ +F FG + + + D + + F FITF+ + V +L+
Sbjct: 111 GKLFVGGLSWQTSSEKLSEYFGMFGTVTDVLIMKDPVTQRSRGFGFITFQEPNSVDKVLQ 170
Query: 245 NPKQKINDKEVDVKKATPKPEP 266
P ++ K++D K ATPK P
Sbjct: 171 VPIHTLDGKKIDPKHATPKNRP 192
Score = 46.2 bits (108), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 30/44 (68%)
Query: 607 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+E+L E+F +G + +V + DP T RSRGF FI F++ S++K
Sbjct: 124 SEKLSEYFGMFGTVTDVLIMKDPVTQRSRGFGFITFQEPNSVDK 167
Score = 43.5 bits (101), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 37/57 (64%), Gaps = 2/57 (3%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFYS 660
D EE+K +FS++G++E + D T R RGF F+ F++ + +++ V +++F++
Sbjct: 210 DTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEDVVDR--VCEIHFHT 264
>gi|351702220|gb|EHB05139.1| RNA-binding protein Musashi-like protein 1, partial [Heterocephalus
glaber]
Length = 329
Score = 108 bits (271), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 94/159 (59%), Gaps = 14/159 (8%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
E L+E+F ++GE++ + DP T RSRGF F+ F D +A V+ V+A+ H +++K
Sbjct: 1 EGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMD-----QAGVDKVLAQSRHELDSK 55
Query: 174 KIEAK---------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQ 224
I+ K K ++ KIFVGGLS E++K +F QFG + + + +DK+ ++
Sbjct: 56 TIDPKVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNR 115
Query: 225 RKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ F F+TFE E +V + + +IN+K V+ KKA PK
Sbjct: 116 HRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPK 154
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 44/75 (58%), Gaps = 5/75 (6%)
Query: 109 VHKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNH 168
V+ E++K++F ++G++++ L D T R RGF F+ F+ + +EK V H
Sbjct: 85 VNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEK-----VCEIHFH 139
Query: 169 VINNKKIEAKKAKAK 183
INNK +E KKA+ K
Sbjct: 140 EINNKMVECKKAQPK 154
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 28/43 (65%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
E L+E+F ++GE++ + DP T RSRGF F+ F D ++K
Sbjct: 1 EGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDK 43
Score = 42.7 bits (99), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 37/57 (64%), Gaps = 2/57 (3%)
Query: 603 VDKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFY 659
V+ E++K++F ++G++++ L D T R RGF F+ F+ + +EK V +++F+
Sbjct: 85 VNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEK--VCEIHFH 139
Score = 40.0 bits (92), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 30/46 (65%)
Query: 452 YDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 497
+DK+ ++ + F F+TFE E +V + + +IN+K V+ KKA PK
Sbjct: 109 FDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPK 154
>gi|259483749|tpe|CBF79395.1| TPA: heterogeneous nuclear ribonucleoprotein HRP1 (AFU_orthologue;
AFUA_2G06090) [Aspergillus nidulans FGSC A4]
Length = 559
Score = 108 bits (271), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 92/150 (61%), Gaps = 2/150 (1%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+ LKE+FS++GE++ T+ D TGRSRGF F+ FKD +++ V++ +G +I+ K
Sbjct: 124 QSLKEYFSQFGEVQECTVMRDSATGRSRGFGFLTFKDPKTVNTVMVKEHYLDG-KIIDPK 182
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
+ + + K+ KIFVGG+S E +++ K F QFG +I+ + DK + + F F+TF
Sbjct: 183 RAIPRDEQEKTSKIFVGGVSQEATEQDFKQFFMQFGRVIDATLMIDKDTGRPRGFGFVTF 242
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ E+ V L P + I K ++VKKA P+
Sbjct: 243 DSEAAVEAALSRPLE-ILGKTIEVKKAQPR 271
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 35/51 (68%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYF 658
+ LKE+FS++GE++ T+ D TGRSRGF F+ FKD +++ V++ Y
Sbjct: 124 QSLKEYFSQFGEVQECTVMRDSATGRSRGFGFLTFKDPKTVNTVMVKEHYL 174
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GK+F+GGL+ E D+ +K +F+QFG + E + D + + + F F+TF+ V ++
Sbjct: 110 GKMFIGGLNWETTDQSLKEYFSQFGEVQECTVMRDSATGRSRGFGFLTFKDPKTVNTVMV 169
Query: 245 NPKQKINDKEVDVKKATPKPE 265
+ ++ K +D K+A P+ E
Sbjct: 170 K-EHYLDGKIIDPKRAIPRDE 189
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
G+ + TE+ K+ F ++G + + TL D +TGR RGF F+ F ++E A
Sbjct: 200 GVSQEATEQDFKQFFMQFGRVIDATLMIDKDTGRPRGFGFVTFDSEAAVEAA 251
>gi|336263120|ref|XP_003346341.1| hypothetical protein SMAC_07818 [Sordaria macrospora k-hell]
gi|380091669|emb|CCC10801.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 532
Score = 108 bits (271), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 93/150 (62%), Gaps = 2/150 (1%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+ L+++FS+YGE+ T+ D TGRSRGF F+ FKD +++ V++ +G +I+ K
Sbjct: 13 QSLRDYFSQYGEVVECTVMRDGATGRSRGFGFLTFKDPKTVNVVMVKEHYLDGK-IIDPK 71
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
+ + + K+ KIFVGG+S E D E + +FAQFG +++ + DK + + F F+TF
Sbjct: 72 RAIPRDEQEKTSKIFVGGVSQETTDHEFREYFAQFGRVVDATLMMDKDTGRPRGFGFVTF 131
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKATPK 263
E E+ V D + +I+ K ++VKKA P+
Sbjct: 132 ESEAGV-DACLSANLEIHGKPIEVKKAQPR 160
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 34/51 (66%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYF 658
+ L+++FS+YGE+ T+ D TGRSRGF F+ FKD +++ V++ Y
Sbjct: 13 QSLRDYFSQYGEVVECTVMRDGATGRSRGFGFLTFKDPKTVNVVMVKEHYL 63
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
Query: 187 IFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNP 246
+F+GGL+ E D+ ++ +F+Q+G ++E + D + + + F F+TF+ + ++++
Sbjct: 1 MFIGGLNWETTDQSLRDYFSQYGEVVECTVMRDGATGRSRGFGFLTFK-DPKTVNVVMVK 59
Query: 247 KQKINDKEVDVKKATPKPE 265
+ ++ K +D K+A P+ E
Sbjct: 60 EHYLDGKIIDPKRAIPRDE 78
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 601 GIVDKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLE 649
G+ + T+ E +E+F+++G + + TL D +TGR RGF F+ F+ ++
Sbjct: 89 GVSQETTDHEFREYFAQFGRVVDATLMMDKDTGRPRGFGFVTFESEAGVD 138
>gi|426238559|ref|XP_004013218.1| PREDICTED: RNA-binding protein Musashi homolog 2 [Ovis aries]
Length = 343
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 97/166 (58%), Gaps = 16/166 (9%)
Query: 117 KEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNKKIE 176
+++FSK+GEI + DP T RSRGF F+ F D ASV+ V+ + +H +++K I+
Sbjct: 53 RDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFAD-----PASVDKVLGQPHHELDSKTID 107
Query: 177 AK---------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKN 227
K K ++ KIFVGGLS E++K +F QFG + + + +DK+ ++ +
Sbjct: 108 PKVAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRG 167
Query: 228 FCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE--PFGVRG 271
F F+TFE+E VV + + +IN+K V+ KKA PK P G RG
Sbjct: 168 FGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMFPPGTRG 213
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 68/133 (51%), Gaps = 19/133 (14%)
Query: 58 SFSENCLLEDSIGKPLTVSCSHHYYLFDQILRTHFFYIMEAKNKMVSHPGIV-------H 110
+F++ ++ +G+P H+ L + + + A+ KMV+ + +
Sbjct: 83 TFADPASVDKVLGQP-------HHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSAN 135
Query: 111 KITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVI 170
+ E++K++F ++G++E+ L D T R RGF F+ F++ + +EK V H I
Sbjct: 136 TVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEK-----VCEIHFHEI 190
Query: 171 NNKKIEAKKAKAK 183
NNK +E KKA+ K
Sbjct: 191 NNKMVECKKAQPK 203
Score = 47.8 bits (112), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 61/115 (53%), Gaps = 16/115 (13%)
Query: 552 SFSENCLLEDSIGKPLTVSCSHYHYLFDQNLRTHYFYIVEAKNKMVSHPGIV-------D 604
+F++ ++ +G+P +H L + + + A+ KMV+ + +
Sbjct: 83 TFADPASVDKVLGQP-------HHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSAN 135
Query: 605 KITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFY 659
+ E++K++F ++G++E+ L D T R RGF F+ F++ + +EK V +++F+
Sbjct: 136 TVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEK--VCEIHFH 188
Score = 47.4 bits (111), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 27/40 (67%)
Query: 611 KEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+++FSK+GEI + DP T RSRGF F+ F D S++K
Sbjct: 53 RDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDK 92
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 35/56 (62%), Gaps = 2/56 (3%)
Query: 452 YDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE--PFGVRG 505
+DK+ ++ + F F+TFE+E VV + + +IN+K V+ KKA PK P G RG
Sbjct: 158 FDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMFPPGTRG 213
>gi|294658754|ref|XP_002770838.1| DEHA2F16698p [Debaryomyces hansenii CBS767]
gi|202953359|emb|CAR66359.1| DEHA2F16698p [Debaryomyces hansenii CBS767]
Length = 411
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 58/158 (36%), Positives = 98/158 (62%), Gaps = 2/158 (1%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ TE+ L E+F+KYGE+ + T+ D NTG+SRGF F+ FKD +S+++ D I +
Sbjct: 92 GLNWDTTEQGLVEYFTKYGEVIDHTIMRDNNTGKSRGFGFLTFKDPKSVDEVIKTDHILD 151
Query: 166 GNHVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQR 225
G +I+ K+ A++ + K GKIFVGG+ P + +++ F+QFG+II+ ++ DK +
Sbjct: 152 G-KLIDPKRAIAREEQDKVGKIFVGGIDPMVNEKDFNDFFSQFGSIIDAQLMIDKDTGRS 210
Query: 226 KNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ F FIT++ V + N + K ++VK+A P+
Sbjct: 211 RGFGFITYDSPDAVDRVTVNKYLTLKGKSMEVKRAEPR 248
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 34/47 (72%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D + L E+F+KYGE+ + T+ D NTG+SRGF F+ FKD +S+++
Sbjct: 96 DTTEQGLVEYFTKYGEVIDHTIMRDNNTGKSRGFGFLTFKDPKSVDE 142
Score = 42.0 bits (97), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 33/55 (60%), Gaps = 2/55 (3%)
Query: 601 GIVDKITEE--LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASV 653
G +D + E + FS++G I + L D +TGRSRGF FI + +++++ +V
Sbjct: 175 GGIDPMVNEKDFNDFFSQFGSIIDAQLMIDKDTGRSRGFGFITYDSPDAVDRVTV 229
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GK+F+GGL+ + ++ + +F ++G +I+ + D + + + F F+TF+ V +++K
Sbjct: 86 GKMFIGGLNWDTTEQGLVEYFTKYGEVIDHTIMRDNNTGKSRGFGFLTFKDPKSVDEVIK 145
Query: 245 NPKQKINDKEVDVKKATPKPE 265
++ K +D K+A + E
Sbjct: 146 T-DHILDGKLIDPKRAIAREE 165
>gi|170042573|ref|XP_001848995.1| heterogeneous nuclear ribonucleoprotein [Culex quinquefasciatus]
gi|167866108|gb|EDS29491.1| heterogeneous nuclear ribonucleoprotein [Culex quinquefasciatus]
Length = 426
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 63/160 (39%), Positives = 93/160 (58%), Gaps = 14/160 (8%)
Query: 113 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINN 172
+E+L E+F +G++ +V + DP T RSRGF FI F+ E SV+ V+ H ++
Sbjct: 180 SEKLSEYFGMFGKVTDVLIMKDPITQRSRGFGFITFQ-----EPNSVDKVLKVPIHTLDG 234
Query: 173 KKIEAKKAKAK---------SGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKS 223
KKI+ K A K + KIFVGG+S + EE+K +F+QFG + ET M D+
Sbjct: 235 KKIDPKHATPKNRPKTQSNKTKKIFVGGVSQDTSAEEVKQYFSQFGKVEETVMLMDQQTK 294
Query: 224 QRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ + F F+TFEHE VV + + I +K+V+ KKA PK
Sbjct: 295 RHRGFGFVTFEHEDVVDRVCEIHFHTIKNKKVECKKAQPK 334
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 47/82 (57%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GK+FVGGLS + E++ +F FG + + + D + + F FITF+ + V +LK
Sbjct: 167 GKLFVGGLSWQTSSEKLSEYFGMFGKVTDVLIMKDPITQRSRGFGFITFQEPNSVDKVLK 226
Query: 245 NPKQKINDKEVDVKKATPKPEP 266
P ++ K++D K ATPK P
Sbjct: 227 VPIHTLDGKKIDPKHATPKNRP 248
Score = 46.2 bits (108), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 31/44 (70%)
Query: 607 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+E+L E+F +G++ +V + DP T RSRGF FI F++ S++K
Sbjct: 180 SEKLSEYFGMFGKVTDVLIMKDPITQRSRGFGFITFQEPNSVDK 223
Score = 43.5 bits (101), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 37/57 (64%), Gaps = 2/57 (3%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFYS 660
D EE+K++FS++G++E + D T R RGF F+ F+ + +++ V +++F++
Sbjct: 266 DTSAEEVKQYFSQFGKVEETVMLMDQQTKRHRGFGFVTFEHEDVVDR--VCEIHFHT 320
Score = 39.7 bits (91), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 32/54 (59%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 497
++ ET M D+ + + F F+TFEHE VV + + I +K+V+ KKA PK
Sbjct: 281 KVEETVMLMDQQTKRHRGFGFVTFEHEDVVDRVCEIHFHTIKNKKVECKKAQPK 334
>gi|426247780|ref|XP_004017654.1| PREDICTED: RNA-binding protein Musashi homolog 1 [Ovis aries]
Length = 325
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 94/159 (59%), Gaps = 14/159 (8%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
E L+E+F ++GE++ + DP T RSRGF F+ F D +A V+ V+A+ H +++K
Sbjct: 24 EGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMD-----QAGVDKVLAQSRHELDSK 78
Query: 174 KIEAK---------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQ 224
I+ K K ++ KIFVGGLS E++K +F QFG + + + +DK+ ++
Sbjct: 79 TIDPKVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNR 138
Query: 225 RKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ F F+TFE E +V + + +IN+K V+ KKA PK
Sbjct: 139 HRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPK 177
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 44/75 (58%), Gaps = 5/75 (6%)
Query: 109 VHKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNH 168
V+ E++K++F ++G++++ L D T R RGF F+ F+ + +EK V H
Sbjct: 108 VNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEK-----VCEIHFH 162
Query: 169 VINNKKIEAKKAKAK 183
INNK +E KKA+ K
Sbjct: 163 EINNKMVECKKAQPK 177
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 28/43 (65%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
E L+E+F ++GE++ + DP T RSRGF F+ F D ++K
Sbjct: 24 EGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDK 66
Score = 42.7 bits (99), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 37/57 (64%), Gaps = 2/57 (3%)
Query: 603 VDKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFY 659
V+ E++K++F ++G++++ L D T R RGF F+ F+ + +EK V +++F+
Sbjct: 108 VNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEK--VCEIHFH 162
Score = 40.0 bits (92), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 30/46 (65%)
Query: 452 YDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 497
+DK+ ++ + F F+TFE E +V + + +IN+K V+ KKA PK
Sbjct: 132 FDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPK 177
>gi|148687912|gb|EDL19859.1| Musashi homolog 1(Drosophila) [Mus musculus]
Length = 280
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 67/194 (34%), Positives = 105/194 (54%), Gaps = 16/194 (8%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
E L+E+F ++GE++ + DP T RSRGF F+ F D +A V+ V+A+ H +++K
Sbjct: 1 EGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMD-----QAGVDKVLAQSRHELDSK 55
Query: 174 KIEAK---------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQ 224
I+ K K ++ KIFVGGLS E++K +F QFG + + + +DK+ ++
Sbjct: 56 TIDPKVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKHYFEQFGKVDDAMLMFDKTTNR 115
Query: 225 RKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKP--EPFGVRGGRGGRGGRGGR 282
+ F F+TFE E +V + + +IN+K V+ KKA PK P G GR G
Sbjct: 116 HRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPKEVMSPTGSARGRSRVMPYGMD 175
Query: 283 GGRMAGGYGGYGGY 296
+ G GY G+
Sbjct: 176 AFMLGIGMLGYPGF 189
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 43/75 (57%), Gaps = 5/75 (6%)
Query: 109 VHKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNH 168
V+ E++K +F ++G++++ L D T R RGF F+ F+ + +EK V H
Sbjct: 85 VNTTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEK-----VCEIHFH 139
Query: 169 VINNKKIEAKKAKAK 183
INNK +E KKA+ K
Sbjct: 140 EINNKMVECKKAQPK 154
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 28/44 (63%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
E L+E+F ++GE++ + DP T RSRGF F+ F D ++K
Sbjct: 1 EGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKV 44
Score = 42.0 bits (97), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Query: 603 VDKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFY 659
V+ E++K +F ++G++++ L D T R RGF F+ F+ + +EK V +++F+
Sbjct: 85 VNTTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEK--VCEIHFH 139
Score = 40.4 bits (93), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 55/128 (42%), Gaps = 10/128 (7%)
Query: 452 YDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKP--EPFGVRGGRGG 509
+DK+ ++ + F F+TFE E +V + + +IN+K V+ KKA PK P G GR
Sbjct: 109 FDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPKEVMSPTGSARGRSR 168
Query: 510 RGGRGGRGGRMAGGYGGYGGY-GGGYGELDYLQL-----WQF--FDWISSSFSENCLLED 561
G + G GY G+ Y Y L +QF F S +L +
Sbjct: 169 VMPYGMDAFMLGIGMLGYPGFQATTYASRSYTGLAPGYTYQFPEFRVERSPLPSAPVLPE 228
Query: 562 SIGKPLTV 569
PLT
Sbjct: 229 LTAIPLTA 236
>gi|365982363|ref|XP_003668015.1| hypothetical protein NDAI_0A06170 [Naumovozyma dairenensis CBS 421]
gi|343766781|emb|CCD22772.1| hypothetical protein NDAI_0A06170 [Naumovozyma dairenensis CBS 421]
Length = 552
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 58/163 (35%), Positives = 100/163 (61%), Gaps = 12/163 (7%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + TEE LK++FSKYG + ++ + D N+GRSRGF F+ F E S D + +
Sbjct: 235 GLNWETTEEKLKDYFSKYGNVVDLKIMKDANSGRSRGFGFLSF------EHPSSVDEVVK 288
Query: 166 GNHVINNKKIEAKKA-----KAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDK 220
H+++ K I+ K+A + K+GKIFVGG+ P+++ +E + FAQ+G II+ ++ DK
Sbjct: 289 SQHILDGKVIDPKRAIPREEQDKTGKIFVGGIGPDVRPKEFEEFFAQWGTIIDAQLMLDK 348
Query: 221 SKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ + F FIT++ V + +N + DK++++K+A P+
Sbjct: 349 DTGRSRGFGFITYDSGEAVDRVCQNKYIQFKDKQIEIKRAAPR 391
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 58/83 (69%), Gaps = 1/83 (1%)
Query: 183 KSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDL 242
+S K+F+GGL+ E +E++K +F+++GN+++ ++ D + + + F F++FEH S V ++
Sbjct: 227 ESCKLFIGGLNWETTEEKLKDYFSKYGNVVDLKIMKDANSGRSRGFGFLSFEHPSSVDEV 286
Query: 243 LKNPKQKINDKEVDVKKATPKPE 265
+K+ + ++ K +D K+A P+ E
Sbjct: 287 VKS-QHILDGKVIDPKRAIPREE 308
Score = 46.2 bits (108), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 32/43 (74%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
E+LK++FSKYG + ++ + D N+GRSRGF F+ F+ S+++
Sbjct: 243 EKLKDYFSKYGNVVDLKIMKDANSGRSRGFGFLSFEHPSSVDE 285
Score = 39.7 bits (91), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 29/43 (67%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+E +E F+++G I + L D +TGRSRGF FI + E++++
Sbjct: 327 KEFEEFFAQWGTIIDAQLMLDKDTGRSRGFGFITYDSGEAVDR 369
>gi|397525478|ref|XP_003832693.1| PREDICTED: RNA-binding protein Musashi homolog 1 [Pan paniscus]
Length = 424
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 94/159 (59%), Gaps = 14/159 (8%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
E L+E+F ++GE++ + DP T RSRGF F+ F D +A V+ V+A+ H +++K
Sbjct: 107 EGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMD-----QAGVDKVLAQSRHELDSK 161
Query: 174 KIEAK---------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQ 224
I+ K K ++ KIFVGGLS E++K +F QFG + + + +DK+ ++
Sbjct: 162 TIDPKVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNR 221
Query: 225 RKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ F F+TFE E +V + + +IN+K V+ KKA PK
Sbjct: 222 HRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPK 260
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 44/75 (58%), Gaps = 5/75 (6%)
Query: 109 VHKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNH 168
V+ E++K++F ++G++++ L D T R RGF F+ F+ + +EK V H
Sbjct: 191 VNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEK-----VCEIHFH 245
Query: 169 VINNKKIEAKKAKAK 183
INNK +E KKA+ K
Sbjct: 246 EINNKMVECKKAQPK 260
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 28/43 (65%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
E L+E+F ++GE++ + DP T RSRGF F+ F D ++K
Sbjct: 107 EGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDK 149
Score = 43.1 bits (100), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 51/98 (52%), Gaps = 9/98 (9%)
Query: 569 VSCSHYHYLFDQNLRTHYFYIVEAKNKMVSHP------GI-VDKITEELKEHFSKYGEIE 621
V H L + + + A+ KMV+ G+ V+ E++K++F ++G+++
Sbjct: 150 VLAQSRHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVD 209
Query: 622 NVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFY 659
+ L D T R RGF F+ F+ + +EK V +++F+
Sbjct: 210 DAMLMFDKTTNRHRGFGFVTFESEDIVEK--VCEIHFH 245
Score = 40.0 bits (92), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 30/46 (65%)
Query: 452 YDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 497
+DK+ ++ + F F+TFE E +V + + +IN+K V+ KKA PK
Sbjct: 215 FDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPK 260
>gi|323346676|gb|EGA80960.1| Hrp1p [Saccharomyces cerevisiae Lalvin QA23]
Length = 576
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 98/163 (60%), Gaps = 12/163 (7%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ TE+ L+E+F KYG + ++ + DP TGRSRGF F+ F EK S D + +
Sbjct: 165 GLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSF------EKPSSVDEVVK 218
Query: 166 GNHVINNKKIEAKKA-----KAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDK 220
H+++ K I+ K+A + K+GKIFVGG+ P+++ +E + F+Q+G II+ ++ DK
Sbjct: 219 TQHILDGKVIDPKRAIPRDEQDKTGKIFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDK 278
Query: 221 SKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
Q + F F+T++ V + +N D+++++K+A P+
Sbjct: 279 DTGQSRGFGFVTYDSADAVDRVCQNKFIDFKDRKIEIKRAEPR 321
Score = 47.0 bits (110), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D + L+E+F KYG + ++ + DP TGRSRGF F+ F+ S+++
Sbjct: 169 DTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVDE 215
Score = 46.2 bits (108), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 57/98 (58%), Gaps = 3/98 (3%)
Query: 170 INNKKIEAKKA--KAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKN 227
+ K E KA +S K+F+GGL+ + ++ ++ +F ++G + + ++ D + + +
Sbjct: 142 VTQTKEERSKADLSKESCKMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRG 201
Query: 228 FCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE 265
F F++FE S V +++K + ++ K +D K+A P+ E
Sbjct: 202 FGFLSFEKPSSVDEVVKT-QHILDGKVIDPKRAIPRDE 238
>gi|159163803|pdb|2CJK|A Chain A, Structure Of The Rna Binding Domain Of Hrp1 In Complex
With Rna
gi|301598362|pdb|2KM8|C Chain C, Interdomain Rrm Packing Contributes To Rna Recognition In
The Rna15, Hrp1, Anchor Rna 3' Processing Ternary
Complex
Length = 167
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 94/155 (60%), Gaps = 11/155 (7%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+ L+E+F KYG + ++ + DP TGRSRGF F+ S EK S D + + H+++ K
Sbjct: 18 DNLREYFGKYGTVTDLKIMKDPATGRSRGFGFL------SFEKPSSVDEVVKTQHILDGK 71
Query: 174 KIEAKKA-----KAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNF 228
I+ K+A + K+GKIFVGG+ P+++ +E + F+Q+G II+ ++ DK Q + F
Sbjct: 72 VIDPKRAIPRDEQDKTGKIFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDKDTGQSRGF 131
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
F+T++ V + +N D+++++K+A P+
Sbjct: 132 GFVTYDSADAVDRVCQNKFIDFKDRKIEIKRAEPR 166
Score = 46.6 bits (109), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 52/83 (62%), Gaps = 1/83 (1%)
Query: 183 KSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDL 242
+S K+F+GGL+ + ++ ++ +F ++G + + ++ D + + + F F++FE S V ++
Sbjct: 2 ESCKMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVDEV 61
Query: 243 LKNPKQKINDKEVDVKKATPKPE 265
+K + ++ K +D K+A P+ E
Sbjct: 62 VKT-QHILDGKVIDPKRAIPRDE 83
Score = 46.2 bits (108), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 31/48 (64%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
D + L+E+F KYG + ++ + DP TGRSRGF F+ F+ S+++
Sbjct: 14 DTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVDEV 61
>gi|344249205|gb|EGW05309.1| RNA-binding protein Musashi-like 1 [Cricetulus griseus]
Length = 338
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 94/159 (59%), Gaps = 14/159 (8%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
E L+E+F ++GE++ + DP T RSRGF F+ F D +A V+ V+A+ H +++K
Sbjct: 1 EGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMD-----QAGVDKVLAQSRHELDSK 55
Query: 174 KIEAK---------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQ 224
I+ K K ++ KIFVGGLS E++K +F QFG + + + +DK+ ++
Sbjct: 56 TIDPKVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNR 115
Query: 225 RKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ F F+TFE E +V + + +IN+K V+ KKA PK
Sbjct: 116 HRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPK 154
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 44/75 (58%), Gaps = 5/75 (6%)
Query: 109 VHKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNH 168
V+ E++K++F ++G++++ L D T R RGF F+ F+ + +EK V H
Sbjct: 85 VNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEK-----VCEIHFH 139
Query: 169 VINNKKIEAKKAKAK 183
INNK +E KKA+ K
Sbjct: 140 EINNKMVECKKAQPK 154
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 28/43 (65%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
E L+E+F ++GE++ + DP T RSRGF F+ F D ++K
Sbjct: 1 EGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDK 43
Score = 43.1 bits (100), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 37/57 (64%), Gaps = 2/57 (3%)
Query: 603 VDKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFY 659
V+ E++K++F ++G++++ L D T R RGF F+ F+ + +EK V +++F+
Sbjct: 85 VNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEK--VCEIHFH 139
Score = 39.7 bits (91), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 30/46 (65%)
Query: 452 YDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 497
+DK+ ++ + F F+TFE E +V + + +IN+K V+ KKA PK
Sbjct: 109 FDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPK 154
>gi|26350925|dbj|BAC39099.1| unnamed protein product [Mus musculus]
Length = 301
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 99/167 (59%), Gaps = 15/167 (8%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + T+E L+E+F ++GE++ + DP T RSRGF F+ F D +A V+ V+A+
Sbjct: 5 GLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMD-----QAGVDKVLAQ 59
Query: 166 GNHVINNKKIEAK---------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEM 216
H +++K I+ K K ++ KIFVGGLS E++K +F QFG + + +
Sbjct: 60 SRHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKHYFEQFGKVDDAML 119
Query: 217 PYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+DK+ ++ + F F+TFE E +V + + +IN+K V+ KKA PK
Sbjct: 120 MFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPK 166
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 43/77 (55%)
Query: 187 IFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNP 246
+F+GGLS + E ++ +F QFG + E + D + + F F+TF ++ V +L
Sbjct: 1 MFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQS 60
Query: 247 KQKINDKEVDVKKATPK 263
+ +++ K +D K A P+
Sbjct: 61 RHELDSKTIDPKVAFPR 77
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
G+ + T+E L+E+F ++GE++ + DP T RSRGF F+ F D ++K
Sbjct: 5 GLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKV 56
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Query: 603 VDKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFY 659
V+ E++K +F ++G++++ L D T R RGF F+ F+ + +EK V +++F+
Sbjct: 97 VNTTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEK--VCEIHFH 151
Score = 39.3 bits (90), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 30/46 (65%)
Query: 452 YDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 497
+DK+ ++ + F F+TFE E +V + + +IN+K V+ KKA PK
Sbjct: 121 FDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPK 166
>gi|449447863|ref|XP_004141686.1| PREDICTED: uncharacterized protein LOC101220676 [Cucumis sativus]
gi|449525968|ref|XP_004169988.1| PREDICTED: uncharacterized LOC101220676 [Cucumis sativus]
Length = 700
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/237 (30%), Positives = 116/237 (48%), Gaps = 45/237 (18%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + TE+ +++FSKYGEI + + D +TGR RGF F+ F D ++ D++ +
Sbjct: 429 GVAWETTEDTFRDYFSKYGEIADSVIMIDKHTGRPRGFGFVTFCD------PAIADMVLK 482
Query: 166 GNHVINNKKIEAK----------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETE 215
+H+I+ + +E K K +++ KIFVGG+ P + +EE K +F+ FG IIE +
Sbjct: 483 IDHIIDGRAVEVKRTVPRADMNDKMVSRTKKIFVGGIPPGLTEEEFKDYFSSFGRIIEHQ 542
Query: 216 MPYDKSKSQRKNFCFITFEHESVVIDLLKNPK-QKINDKEVDVKKATPKPEPFGVRGGRG 274
+ D + + F FITFE+E V ++ + ++ K+V++KKA PK + G
Sbjct: 543 IMIDYKTKRSRGFGFITFENEDSVENIFSGDRIHELGGKQVEIKKAVPKRVAYDFNSNSG 602
Query: 275 GRGG--------------------------RGGRGGRMAGGYGGYGGYGGGYGGILY 305
G GG G A YG Y YG GYG +Y
Sbjct: 603 QTSGYDMYRCGGLYDDIIGTDFGPYDLYAPYGGFGVNYASFYGAY-NYGFGYGASMY 658
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 62/112 (55%), Gaps = 7/112 (6%)
Query: 154 LEKASVEDVIAEGNHVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIE 213
LE+A+V+ +E I N + + SGK+FVGG++ E ++ + +F+++G I +
Sbjct: 398 LEQANVDSTRSE----IKNSTTQYDSSS--SGKLFVGGVAWETTEDTFRDYFSKYGEIAD 451
Query: 214 TEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE 265
+ + DK + + F F+TF + + D++ I+ + V+VK+ P+ +
Sbjct: 452 SVIMIDKHTGRPRGFGFVTF-CDPAIADMVLKIDHIIDGRAVEVKRTVPRAD 502
Score = 43.5 bits (101), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKD 644
G+ + TE+ +++FSKYGEI + + D +TGR RGF F+ F D
Sbjct: 429 GVAWETTEDTFRDYFSKYGEIADSVIMIDKHTGRPRGFGFVTFCD 473
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 31/50 (62%), Gaps = 3/50 (6%)
Query: 600 PGIVDKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLE 649
PG+ + EE K++FS +G I + D T RSRGF FI F++ +S+E
Sbjct: 521 PGLTE---EEFKDYFSSFGRIIEHQIMIDYKTKRSRGFGFITFENEDSVE 567
Score = 38.9 bits (89), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 51/116 (43%), Gaps = 5/116 (4%)
Query: 387 VADNLLLCDNFPSIRELEIPEAFLTKTTTVPMTTTEHMVLVTGT--DMMHMEVTEAVPM- 443
+AD +L D+ R +E+ M + + V G + E +
Sbjct: 476 IADMVLKIDHIIDGRAVEVKRTVPRADMNDKMVSRTKKIFVGGIPPGLTEEEFKDYFSSF 535
Query: 444 -EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPK-QKINDKEVDVKKATPK 497
IIE ++ D + + F FITFE+E V ++ + ++ K+V++KKA PK
Sbjct: 536 GRIIEHQIMIDYKTKRSRGFGFITFENEDSVENIFSGDRIHELGGKQVEIKKAVPK 591
>gi|401623736|gb|EJS41824.1| hrp1p [Saccharomyces arboricola H-6]
Length = 540
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 98/163 (60%), Gaps = 12/163 (7%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ TE+ L+E+F KYG + ++ + DP TGRSRGF F+ F EK S D + +
Sbjct: 167 GLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSF------EKPSSVDEVVK 220
Query: 166 GNHVINNKKIEAKKA-----KAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDK 220
H+++ K I+ K+A + K+GKIFVGG+ P+++ +E + F+Q+G II+ ++ DK
Sbjct: 221 TQHILDGKVIDPKRAIPRDEQDKTGKIFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDK 280
Query: 221 SKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
Q + F F+T++ V + +N D+++++K+A P+
Sbjct: 281 DTGQSRGFGFVTYDSADAVDRVCQNKFIDFKDRKIEIKRAEPR 323
Score = 47.0 bits (110), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D + L+E+F KYG + ++ + DP TGRSRGF F+ F+ S+++
Sbjct: 171 DTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVDE 217
Score = 46.2 bits (108), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 52/83 (62%), Gaps = 1/83 (1%)
Query: 183 KSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDL 242
+S K+F+GGL+ + ++ ++ +F ++G + + ++ D + + + F F++FE S V ++
Sbjct: 159 ESCKMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVDEV 218
Query: 243 LKNPKQKINDKEVDVKKATPKPE 265
+K + ++ K +D K+A P+ E
Sbjct: 219 VKT-QHILDGKVIDPKRAIPRDE 240
>gi|54647597|gb|AAH84959.1| Msi1h protein [Xenopus laevis]
Length = 321
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 98/167 (58%), Gaps = 15/167 (8%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + T+E L+E+FS +G+++ + DP T RSRGF F+ F D +A V+ V+A+
Sbjct: 26 GLSWQTTQEGLREYFSHFGDVKECLVMRDPLTKRSRGFGFVTFMD-----QAGVDKVLAQ 80
Query: 166 GNHVINNKKIEAK---------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEM 216
H +++K I+ K K ++ KIFVGGLS E++K +F QFG + + +
Sbjct: 81 SRHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDAML 140
Query: 217 PYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+DK+ ++ + F F+TFE E +V + +IN+K V+ KKA PK
Sbjct: 141 MFDKTTNRHRGFGFVTFEGEDIVEKICDIHFHEINNKMVECKKAQPK 187
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 45/78 (57%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+F+GGLS + E ++ +F+ FG++ E + D + + F F+TF ++ V +L
Sbjct: 21 KMFIGGLSWQTTQEGLREYFSHFGDVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 80
Query: 246 PKQKINDKEVDVKKATPK 263
+ +++ K +D K A P+
Sbjct: 81 SRHELDSKTIDPKVAFPR 98
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
G+ + T+E L+E+FS +G+++ + DP T RSRGF F+ F D ++K
Sbjct: 26 GLSWQTTQEGLREYFSHFGDVKECLVMRDPLTKRSRGFGFVTFMDQAGVDK 76
Score = 44.3 bits (103), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 37/57 (64%), Gaps = 2/57 (3%)
Query: 603 VDKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFY 659
V+ E++K++F ++G++++ L D T R RGF F+ F+ + +EK + D++F+
Sbjct: 118 VNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFEGEDIVEK--ICDIHFH 172
Score = 39.3 bits (90), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 29/46 (63%)
Query: 452 YDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 497
+DK+ ++ + F F+TFE E +V + +IN+K V+ KKA PK
Sbjct: 142 FDKTTNRHRGFGFVTFEGEDIVEKICDIHFHEINNKMVECKKAQPK 187
>gi|322711386|gb|EFZ02959.1| heterogeneous nuclear ribonucleoprotein HRP1 [Metarhizium
anisopliae ARSEF 23]
Length = 517
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/150 (36%), Positives = 93/150 (62%), Gaps = 2/150 (1%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+ L+E+F ++GE+ T+ D TGRSRGF F+ FKD +++ V++ +G +I+ K
Sbjct: 126 QSLREYFEQFGEVVECTVMRDSTTGRSRGFGFLTFKDAKTVNIVMVKEHFLDG-KIIDPK 184
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
+ + + K+ KIFVGG+S E D+E + +FAQFG +++ + DK + + F F+TF
Sbjct: 185 RAIPRDEQEKTSKIFVGGVSQETTDQEFRDYFAQFGRVVDATLMMDKDTGRPRGFGFVTF 244
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKATPK 263
E E+ V + P + I+ K V+VK+A P+
Sbjct: 245 ESEAGVEACINVPLE-IHGKPVEVKRAQPR 273
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 50/80 (62%), Gaps = 1/80 (1%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+F+GGL+ E D+ ++ +F QFG ++E + D + + + F F+TF+ ++ ++++
Sbjct: 113 KMFIGGLNWETTDQSLREYFEQFGEVVECTVMRDSTTGRSRGFGFLTFK-DAKTVNIVMV 171
Query: 246 PKQKINDKEVDVKKATPKPE 265
+ ++ K +D K+A P+ E
Sbjct: 172 KEHFLDGKIIDPKRAIPRDE 191
Score = 47.0 bits (110), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 33/51 (64%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYF 658
+ L+E+F ++GE+ T+ D TGRSRGF F+ FKD +++ V++ +
Sbjct: 126 QSLREYFEQFGEVVECTVMRDSTTGRSRGFGFLTFKDAKTVNIVMVKEHFL 176
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 601 GIVDKIT-EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLE 649
G+ + T +E +++F+++G + + TL D +TGR RGF F+ F+ +E
Sbjct: 202 GVSQETTDQEFRDYFAQFGRVVDATLMMDKDTGRPRGFGFVTFESEAGVE 251
>gi|242014750|ref|XP_002428048.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212512567|gb|EEB15310.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 371
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 93/159 (58%), Gaps = 13/159 (8%)
Query: 113 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINN 172
+E+L+++F +G I +V + DP T RSRGF FI F+ E +SVE+V+ H ++
Sbjct: 72 SEKLRQYFGMFGNITDVLIMKDPVTQRSRGFGFITFE-----EPSSVENVLKVPVHTLDG 126
Query: 173 KKIEAK--------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQ 224
KKI+ K K K+ KIFVGG+S + +E+K +F+QFG + E M D+ +
Sbjct: 127 KKIDPKHATPKGRGKTNGKTKKIFVGGVSQDTSSDEVKVYFSQFGKVEEAVMLMDQQTKR 186
Query: 225 RKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ F F+TFE+E V + + I +K+V+ KKA PK
Sbjct: 187 HRGFGFVTFENEETVDRVCEIHFHNIKNKKVECKKAMPK 225
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 55/96 (57%), Gaps = 8/96 (8%)
Query: 184 SGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLL 243
+GK+FVGGLS + E+++ +F FGNI + + D + + F FITFE S V ++L
Sbjct: 58 AGKLFVGGLSWQTSSEKLRQYFGMFGNITDVLIMKDPVTQRSRGFGFITFEEPSSVENVL 117
Query: 244 KNPKQKINDKEVDVKKATPKPEPFGVRGGRGGRGGR 279
K P ++ K++D K ATPK GRG G+
Sbjct: 118 KVPVHTLDGKKIDPKHATPK--------GRGKTNGK 145
Score = 45.8 bits (107), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 30/43 (69%)
Query: 607 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLE 649
+E+L+++F +G I +V + DP T RSRGF FI F++ S+E
Sbjct: 72 SEKLRQYFGMFGNITDVLIMKDPVTQRSRGFGFITFEEPSSVE 114
Score = 43.9 bits (102), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 39/57 (68%), Gaps = 2/57 (3%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFYS 660
D ++E+K +FS++G++E + D T R RGF F+ F++ E++++ V +++F++
Sbjct: 157 DTSSDEVKVYFSQFGKVEEAVMLMDQQTKRHRGFGFVTFENEETVDR--VCEIHFHN 211
Score = 39.3 bits (90), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 32/61 (52%), Gaps = 8/61 (13%)
Query: 453 DKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGVRGGRGGRGG 512
D + + F FITFE S V ++LK P ++ K++D K ATPK GRG G
Sbjct: 93 DPVTQRSRGFGFITFEEPSSVENVLKVPVHTLDGKKIDPKHATPK--------GRGKTNG 144
Query: 513 R 513
+
Sbjct: 145 K 145
>gi|148233348|ref|NP_001084040.1| musashi RNA-binding protein 1 [Xenopus laevis]
gi|214630|gb|AAA49919.1| pot. RNA-binding protein (nrp-1B); putative [Xenopus laevis]
Length = 347
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 98/167 (58%), Gaps = 15/167 (8%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + T+E L+E+FS +G+++ + DP T RSRGF F+ F D +A V+ V+A+
Sbjct: 26 GLSWQTTQEGLREYFSHFGDVKECLVMRDPLTKRSRGFGFVTFMD-----QAGVDKVLAQ 80
Query: 166 GNHVINNKKIEAK---------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEM 216
H +++K I+ K K ++ KIFVGGLS E++K +F QFG + + +
Sbjct: 81 SRHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDAML 140
Query: 217 PYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+DK+ ++ + F F+TFE E +V + +IN+K V+ KKA PK
Sbjct: 141 MFDKTTNRHRGFGFVTFEGEDIVEKICDIHFHEINNKMVECKKAQPK 187
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 45/78 (57%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+F+GGLS + E ++ +F+ FG++ E + D + + F F+TF ++ V +L
Sbjct: 21 KMFIGGLSWQTTQEGLREYFSHFGDVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 80
Query: 246 PKQKINDKEVDVKKATPK 263
+ +++ K +D K A P+
Sbjct: 81 SRHELDSKTIDPKVAFPR 98
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
G+ + T+E L+E+FS +G+++ + DP T RSRGF F+ F D ++K
Sbjct: 26 GLSWQTTQEGLREYFSHFGDVKECLVMRDPLTKRSRGFGFVTFMDQAGVDK 76
Score = 43.9 bits (102), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 37/57 (64%), Gaps = 2/57 (3%)
Query: 603 VDKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFY 659
V+ E++K++F ++G++++ L D T R RGF F+ F+ + +EK + D++F+
Sbjct: 118 VNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFEGEDIVEK--ICDIHFH 172
Score = 39.3 bits (90), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 29/46 (63%)
Query: 452 YDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 497
+DK+ ++ + F F+TFE E +V + +IN+K V+ KKA PK
Sbjct: 142 FDKTTNRHRGFGFVTFEGEDIVEKICDIHFHEINNKMVECKKAQPK 187
>gi|350635265|gb|EHA23627.1| hypothetical protein ASPNIDRAFT_52492 [Aspergillus niger ATCC 1015]
Length = 580
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/150 (36%), Positives = 92/150 (61%), Gaps = 2/150 (1%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+ LK++FS++GE++ T+ D TGRSRGF F+ F+D +++ V++ +G +I+ K
Sbjct: 122 QSLKDYFSQFGEVQECTVMRDSATGRSRGFGFLTFRDPKTVNTVMVKEHYLDGK-IIDPK 180
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
+ + + K+ KIFVGG+S E + + K FAQFG +I+ + DK + + F F+TF
Sbjct: 181 RAIPRDEQEKTSKIFVGGVSQEANEHDFKEFFAQFGRVIDATLMIDKDTGRPRGFGFVTF 240
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ E+ V L P + I K ++VKKA P+
Sbjct: 241 DSEAAVEAALSGPLE-ICGKPIEVKKAQPR 269
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 183 KSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDL 242
+ GK+F+GGL+ E D+ +K +F+QFG + E + D + + + F F+TF V +
Sbjct: 106 EDGKMFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDSATGRSRGFGFLTFRDPKTVNTV 165
Query: 243 LKNPKQKINDKEVDVKKATPKPE 265
+ + ++ K +D K+A P+ E
Sbjct: 166 MVK-EHYLDGKIIDPKRAIPRDE 187
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 35/51 (68%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYF 658
+ LK++FS++GE++ T+ D TGRSRGF F+ F+D +++ V++ Y
Sbjct: 122 QSLKDYFSQFGEVQECTVMRDSATGRSRGFGFLTFRDPKTVNTVMVKEHYL 172
Score = 42.4 bits (98), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 601 GIVDKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
G+ + E + KE F+++G + + TL D +TGR RGF F+ F ++E A
Sbjct: 198 GVSQEANEHDFKEFFAQFGRVIDATLMIDKDTGRPRGFGFVTFDSEAAVEAA 249
>gi|317027293|ref|XP_001400598.2| heterogeneous nuclear ribonucleoprotein HRP1 [Aspergillus niger CBS
513.88]
Length = 561
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/150 (36%), Positives = 92/150 (61%), Gaps = 2/150 (1%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+ LK++FS++GE++ T+ D TGRSRGF F+ F+D +++ V++ +G +I+ K
Sbjct: 122 QSLKDYFSQFGEVQECTVMRDSATGRSRGFGFLTFRDPKTVNTVMVKEHYLDGK-IIDPK 180
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
+ + + K+ KIFVGG+S E + + K FAQFG +I+ + DK + + F F+TF
Sbjct: 181 RAIPRDEQEKTSKIFVGGVSQEANEHDFKEFFAQFGRVIDATLMIDKDTGRPRGFGFVTF 240
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ E+ V L P + I K ++VKKA P+
Sbjct: 241 DSEAAVEAALSGPLE-ICGKPIEVKKAQPR 269
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 183 KSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDL 242
+ GK+F+GGL+ E D+ +K +F+QFG + E + D + + + F F+TF V +
Sbjct: 106 EDGKMFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDSATGRSRGFGFLTFRDPKTVNTV 165
Query: 243 LKNPKQKINDKEVDVKKATPKPE 265
+ + ++ K +D K+A P+ E
Sbjct: 166 MVK-EHYLDGKIIDPKRAIPRDE 187
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 35/51 (68%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYF 658
+ LK++FS++GE++ T+ D TGRSRGF F+ F+D +++ V++ Y
Sbjct: 122 QSLKDYFSQFGEVQECTVMRDSATGRSRGFGFLTFRDPKTVNTVMVKEHYL 172
Score = 42.0 bits (97), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 601 GIVDKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
G+ + E + KE F+++G + + TL D +TGR RGF F+ F ++E A
Sbjct: 198 GVSQEANEHDFKEFFAQFGRVIDATLMIDKDTGRPRGFGFVTFDSEAAVEAA 249
>gi|346326836|gb|EGX96432.1| RNA recognition protein, RNP-1 [Cordyceps militaris CM01]
Length = 525
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 94/150 (62%), Gaps = 2/150 (1%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+ L+++FS++GE+ T+ D NTGRSRGF F+ FKD +++ V++ +G +I+ K
Sbjct: 129 QSLRDYFSQFGEVVECTVMRDSNTGRSRGFGFLTFKDAKTVNIVMVKEHYLDG-KIIDPK 187
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
+ + + K+ KIFVGG+S + D+E + FAQFG +I+ + DK + + F F+TF
Sbjct: 188 RAIPRDEQEKTSKIFVGGVSQDTTDQEFREFFAQFGRVIDATLMMDKDTGRPRGFGFVTF 247
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKATPK 263
E E+ V D N +I+ K ++VK+A P+
Sbjct: 248 ESEAGV-DACINIPLEIHGKPIEVKRAQPR 276
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 56/88 (63%), Gaps = 2/88 (2%)
Query: 179 KAKAKS-GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHES 237
KA AK GK+F+GGL+ E D+ ++ +F+QFG ++E + D + + + F F+TF+ ++
Sbjct: 108 KASAKDDGKMFIGGLNWETTDQSLRDYFSQFGEVVECTVMRDSNTGRSRGFGFLTFK-DA 166
Query: 238 VVIDLLKNPKQKINDKEVDVKKATPKPE 265
++++ + ++ K +D K+A P+ E
Sbjct: 167 KTVNIVMVKEHYLDGKIIDPKRAIPRDE 194
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 35/51 (68%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYF 658
+ L+++FS++GE+ T+ D NTGRSRGF F+ FKD +++ V++ Y
Sbjct: 129 QSLRDYFSQFGEVVECTVMRDSNTGRSRGFGFLTFKDAKTVNIVMVKEHYL 179
Score = 42.0 bits (97), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 26/40 (65%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFK 643
D +E +E F+++G + + TL D +TGR RGF F+ F+
Sbjct: 209 DTTDQEFREFFAQFGRVIDATLMMDKDTGRPRGFGFVTFE 248
>gi|322694374|gb|EFY86205.1| heterogeneous nuclear ribonucleoprotein HRP1 [Metarhizium acridum
CQMa 102]
Length = 516
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/150 (36%), Positives = 93/150 (62%), Gaps = 2/150 (1%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+ L+E+F ++GE+ T+ D TGRSRGF F+ FKD +++ V++ +G +I+ K
Sbjct: 122 QSLREYFEQFGEVVECTVMRDSTTGRSRGFGFLTFKDAKTVNIVMVKEHFLDGK-IIDPK 180
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
+ + + K+ KIFVGG+S E D+E + +FAQFG +++ + DK + + F F+TF
Sbjct: 181 RAIPRDEQEKTSKIFVGGVSQETTDQEFRDYFAQFGRVVDATLMMDKDTGRPRGFGFVTF 240
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKATPK 263
E E+ V + P + I+ K V+VK+A P+
Sbjct: 241 ESEAGVEACINVPLE-IHGKPVEVKRAQPR 269
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 55/88 (62%), Gaps = 2/88 (2%)
Query: 179 KAKAKS-GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHES 237
KA AK GK+F+GGL+ E D+ ++ +F QFG ++E + D + + + F F+TF+ ++
Sbjct: 101 KASAKDDGKMFIGGLNWETTDQSLREYFEQFGEVVECTVMRDSTTGRSRGFGFLTFK-DA 159
Query: 238 VVIDLLKNPKQKINDKEVDVKKATPKPE 265
++++ + ++ K +D K+A P+ E
Sbjct: 160 KTVNIVMVKEHFLDGKIIDPKRAIPRDE 187
Score = 46.6 bits (109), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 33/51 (64%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYF 658
+ L+E+F ++GE+ T+ D TGRSRGF F+ FKD +++ V++ +
Sbjct: 122 QSLREYFEQFGEVVECTVMRDSTTGRSRGFGFLTFKDAKTVNIVMVKEHFL 172
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 601 GIVDKIT-EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLE 649
G+ + T +E +++F+++G + + TL D +TGR RGF F+ F+ +E
Sbjct: 198 GVSQETTDQEFRDYFAQFGRVVDATLMMDKDTGRPRGFGFVTFESEAGVE 247
>gi|340730010|ref|XP_003403285.1| PREDICTED: DAZ-associated protein 1-like [Bombus terrestris]
Length = 390
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/159 (38%), Positives = 92/159 (57%), Gaps = 13/159 (8%)
Query: 113 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINN 172
+E+L+E+F +G + +V + DP T RSRGF FI F E SV+ V+ H ++
Sbjct: 74 SEKLREYFGMFGTVTDVLIMKDPVTQRSRGFGFITFA-----EPGSVDKVLKCPIHTLDG 128
Query: 173 KKIEAKKAKAK--------SGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQ 224
KKI+ K A K + KIFVGG+S + +E+KA+F QFG + ET M D+ +
Sbjct: 129 KKIDPKHATPKNRAKQANRTKKIFVGGVSQDTSSDEVKAYFNQFGKVEETVMLMDQQTKR 188
Query: 225 RKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ F F+TFE+E VV + + I +K+V+ KKA PK
Sbjct: 189 HRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPK 227
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 45/79 (56%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GK+FVGGLS + E+++ +F FG + + + D + + F FITF V +LK
Sbjct: 61 GKLFVGGLSWQTSSEKLREYFGMFGTVTDVLIMKDPVTQRSRGFGFITFAEPGSVDKVLK 120
Query: 245 NPKQKINDKEVDVKKATPK 263
P ++ K++D K ATPK
Sbjct: 121 CPIHTLDGKKIDPKHATPK 139
Score = 45.4 bits (106), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 30/44 (68%)
Query: 607 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+E+L+E+F +G + +V + DP T RSRGF FI F + S++K
Sbjct: 74 SEKLREYFGMFGTVTDVLIMKDPVTQRSRGFGFITFAEPGSVDK 117
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 38/57 (66%), Gaps = 2/57 (3%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFYS 660
D ++E+K +F+++G++E + D T R RGF F+ F++ + +++ V +++F++
Sbjct: 159 DTSSDEVKAYFNQFGKVEETVMLMDQQTKRHRGFGFVTFENEDVVDR--VCEIHFHT 213
>gi|383856328|ref|XP_003703661.1| PREDICTED: RNA-binding protein Musashi homolog Rbp6-like [Megachile
rotundata]
Length = 316
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/159 (39%), Positives = 92/159 (57%), Gaps = 13/159 (8%)
Query: 113 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINN 172
+E+L+E+F +G + +V + DP T RSRGF FI F E SV+ V+ H ++
Sbjct: 53 SEKLREYFGMFGTVTDVLIMKDPVTQRSRGFGFITF-----AEPGSVDKVLKCPIHTLDG 107
Query: 173 KKIEAKKAKAK--------SGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQ 224
KKI+ K A K + KIFVGG+S + EE+KA+F QFG + ET M D+ +
Sbjct: 108 KKIDPKHATPKNRAKQANRTKKIFVGGVSQDTSSEEVKAYFNQFGKVEETVMLMDQQTKR 167
Query: 225 RKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ F F+TFE+E VV + + I +K+V+ KKA PK
Sbjct: 168 HRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPK 206
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 45/79 (56%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GK+FVGGLS + E+++ +F FG + + + D + + F FITF V +LK
Sbjct: 40 GKLFVGGLSWQTSSEKLREYFGMFGTVTDVLIMKDPVTQRSRGFGFITFAEPGSVDKVLK 99
Query: 245 NPKQKINDKEVDVKKATPK 263
P ++ K++D K ATPK
Sbjct: 100 CPIHTLDGKKIDPKHATPK 118
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 30/44 (68%)
Query: 607 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+E+L+E+F +G + +V + DP T RSRGF FI F + S++K
Sbjct: 53 SEKLREYFGMFGTVTDVLIMKDPVTQRSRGFGFITFAEPGSVDK 96
Score = 42.7 bits (99), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 38/57 (66%), Gaps = 2/57 (3%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFYS 660
D +EE+K +F+++G++E + D T R RGF F+ F++ + +++ V +++F++
Sbjct: 138 DTSSEEVKAYFNQFGKVEETVMLMDQQTKRHRGFGFVTFENEDVVDR--VCEIHFHT 192
>gi|58332792|ref|NP_001011470.1| musashi RNA-binding protein 1 [Xenopus (Silurana) tropicalis]
gi|147899394|ref|NP_001081302.1| nrp-1B [Xenopus laevis]
gi|214632|gb|AAA49920.1| pot. RNA-binding protein (nrp-1B); putative [Xenopus laevis]
gi|52221204|gb|AAH82667.1| LOC397764 protein [Xenopus laevis]
gi|56970642|gb|AAH88603.1| musashi homolog 1 [Xenopus (Silurana) tropicalis]
Length = 340
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 98/167 (58%), Gaps = 15/167 (8%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + T+E L+E+FS +G+++ + DP T RSRGF F+ F D +A V+ V+A+
Sbjct: 26 GLSWQTTQEGLREYFSHFGDVKECLVMRDPLTKRSRGFGFVTFMD-----QAGVDKVLAQ 80
Query: 166 GNHVINNKKIEAK---------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEM 216
H +++K I+ K K ++ KIFVGGLS E++K +F QFG + + +
Sbjct: 81 SRHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDAML 140
Query: 217 PYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+DK+ ++ + F F+TFE E +V + +IN+K V+ KKA PK
Sbjct: 141 MFDKTTNRHRGFGFVTFEGEDIVEKVCDIHFHEINNKMVECKKAQPK 187
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 45/78 (57%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+F+GGLS + E ++ +F+ FG++ E + D + + F F+TF ++ V +L
Sbjct: 21 KMFIGGLSWQTTQEGLREYFSHFGDVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 80
Query: 246 PKQKINDKEVDVKKATPK 263
+ +++ K +D K A P+
Sbjct: 81 SRHELDSKTIDPKVAFPR 98
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 37/57 (64%), Gaps = 2/57 (3%)
Query: 603 VDKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFY 659
V+ E++K++F ++G++++ L D T R RGF F+ F+ + +EK V D++F+
Sbjct: 118 VNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFEGEDIVEK--VCDIHFH 172
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
G+ + T+E L+E+FS +G+++ + DP T RSRGF F+ F D ++K
Sbjct: 26 GLSWQTTQEGLREYFSHFGDVKECLVMRDPLTKRSRGFGFVTFMDQAGVDK 76
Score = 38.9 bits (89), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 29/46 (63%)
Query: 452 YDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 497
+DK+ ++ + F F+TFE E +V + +IN+K V+ KKA PK
Sbjct: 142 FDKTTNRHRGFGFVTFEGEDIVEKVCDIHFHEINNKMVECKKAQPK 187
>gi|332018477|gb|EGI59067.1| RNA-binding protein Musashi-like protein Rbp6 [Acromyrmex
echinatior]
Length = 369
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/159 (38%), Positives = 93/159 (58%), Gaps = 13/159 (8%)
Query: 113 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINN 172
+E+L+E+F+ +G + +V + DP T RSRGF FI F E SV+ V+ H ++
Sbjct: 53 SEKLREYFNMFGTVTDVLIMKDPMTQRSRGFGFITFA-----EPGSVDKVLKCPIHTLDG 107
Query: 173 KKIEAKKAKAK--------SGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQ 224
KKI+ K A K + KIFVGG+S + +E+KA+F QFG + ET M D+ +
Sbjct: 108 KKIDPKHATPKNRAKQANRTKKIFVGGVSQDTSSDEVKAYFNQFGKVEETVMLMDQQTKR 167
Query: 225 RKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ F F+TFE+E VV + + I +K+V+ KKA PK
Sbjct: 168 HRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPK 206
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 45/79 (56%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GK+FVGGLS + E+++ +F FG + + + D + + F FITF V +LK
Sbjct: 40 GKLFVGGLSWQTSSEKLREYFNMFGTVTDVLIMKDPMTQRSRGFGFITFAEPGSVDKVLK 99
Query: 245 NPKQKINDKEVDVKKATPK 263
P ++ K++D K ATPK
Sbjct: 100 CPIHTLDGKKIDPKHATPK 118
Score = 45.8 bits (107), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 31/45 (68%)
Query: 607 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
+E+L+E+F+ +G + +V + DP T RSRGF FI F + S++K
Sbjct: 53 SEKLREYFNMFGTVTDVLIMKDPMTQRSRGFGFITFAEPGSVDKV 97
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 38/57 (66%), Gaps = 2/57 (3%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFYS 660
D ++E+K +F+++G++E + D T R RGF F+ F++ + +++ V +++F++
Sbjct: 138 DTSSDEVKAYFNQFGKVEETVMLMDQQTKRHRGFGFVTFENEDVVDR--VCEIHFHT 192
>gi|297263669|ref|XP_001087753.2| PREDICTED: hypothetical protein LOC699286 [Macaca mulatta]
Length = 696
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 93/157 (59%), Gaps = 14/157 (8%)
Query: 116 LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNKKI 175
L+E+F ++GE++ + DP T RSRGF F+ F D +A V+ V+A+ H +++K I
Sbjct: 166 LREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMD-----QAGVDKVLAQSRHELDSKTI 220
Query: 176 EAK---------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRK 226
+ K K ++ KIFVGGLS E++K +F QFG + + + +DK+ ++ +
Sbjct: 221 DPKVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHR 280
Query: 227 NFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
F F+TFE E +V + + +IN+K V+ KKA PK
Sbjct: 281 GFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPK 317
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 44/75 (58%), Gaps = 5/75 (6%)
Query: 109 VHKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNH 168
V+ E++K++F ++G++++ L D T R RGF F+ F+ + +EK V H
Sbjct: 248 VNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEK-----VCEIHFH 302
Query: 169 VINNKKIEAKKAKAK 183
INNK +E KKA+ K
Sbjct: 303 EINNKMVECKKAQPK 317
Score = 43.9 bits (102), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 27/41 (65%)
Query: 610 LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
L+E+F ++GE++ + DP T RSRGF F+ F D ++K
Sbjct: 166 LREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDK 206
Score = 43.9 bits (102), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 50/92 (54%), Gaps = 9/92 (9%)
Query: 575 HYLFDQNLRTHYFYIVEAKNKMVSHP------GI-VDKITEELKEHFSKYGEIENVTLKS 627
H L + + + A+ KMV+ G+ V+ E++K++F ++G++++ L
Sbjct: 213 HELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMF 272
Query: 628 DPNTGRSRGFAFIVFKDTESLEKASVEDVYFY 659
D T R RGF F+ F+ + +EK V +++F+
Sbjct: 273 DKTTNRHRGFGFVTFESEDIVEK--VCEIHFH 302
Score = 40.0 bits (92), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 30/46 (65%)
Query: 452 YDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 497
+DK+ ++ + F F+TFE E +V + + +IN+K V+ KKA PK
Sbjct: 272 FDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPK 317
>gi|115400789|ref|XP_001215983.1| hypothetical protein ATEG_06805 [Aspergillus terreus NIH2624]
gi|114191649|gb|EAU33349.1| hypothetical protein ATEG_06805 [Aspergillus terreus NIH2624]
Length = 454
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 93/150 (62%), Gaps = 2/150 (1%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+ LK++FS++GE++ T+ D TGRSRGF F+ F+D +++ V++ +G +I+ K
Sbjct: 13 QSLKDYFSQFGEVQECTVMRDSATGRSRGFGFLTFRDPKTVNTVMVKEHYLDG-KIIDPK 71
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
+ + + K+ KIFVGG+S E +++ K+ F QFG +++ + DK + + F F+TF
Sbjct: 72 RAIPRDEQEKTSKIFVGGVSQEANEQDFKSFFMQFGRVVDATLMIDKDTGRPRGFGFVTF 131
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ E+ V L P + I K ++VKKA P+
Sbjct: 132 DSEAAVEAALSRPLE-ILGKPIEVKKAQPR 160
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 35/51 (68%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYF 658
+ LK++FS++GE++ T+ D TGRSRGF F+ F+D +++ V++ Y
Sbjct: 13 QSLKDYFSQFGEVQECTVMRDSATGRSRGFGFLTFRDPKTVNTVMVKEHYL 63
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 187 IFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNP 246
+F+GGL+ E D+ +K +F+QFG + E + D + + + F F+TF V ++
Sbjct: 1 MFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDSATGRSRGFGFLTFRDPKTVNTVMVK- 59
Query: 247 KQKINDKEVDVKKATPKPE 265
+ ++ K +D K+A P+ E
Sbjct: 60 EHYLDGKIIDPKRAIPRDE 78
Score = 40.0 bits (92), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 26/44 (59%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
++ K F ++G + + TL D +TGR RGF F+ F ++E A
Sbjct: 97 QDFKSFFMQFGRVVDATLMIDKDTGRPRGFGFVTFDSEAAVEAA 140
>gi|367025853|ref|XP_003662211.1| hypothetical protein MYCTH_2302558 [Myceliophthora thermophila ATCC
42464]
gi|347009479|gb|AEO56966.1| hypothetical protein MYCTH_2302558 [Myceliophthora thermophila ATCC
42464]
Length = 501
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/171 (35%), Positives = 100/171 (58%), Gaps = 7/171 (4%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+ L+++FS++GE+ T+ D TGRSRGF F+ FKD +++ V++ +G +I+ K
Sbjct: 13 QSLRDYFSQFGEVVECTVMRDGATGRSRGFGFLTFKDPKTVNIVMVKEHYLDGK-IIDPK 71
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
+ + + K+ KIFVGG+S E D E + +FAQFG +++ + DK + + F F+TF
Sbjct: 72 RAIPRDEQEKTSKIFVGGVSQETTDHEFREYFAQFGRVVDATLMMDKDTGRPRGFGFVTF 131
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKATPK-----PEPFGVRGGRGGRGGR 279
E E+ V L +I+ K ++VKKA P+ + RGG G + GR
Sbjct: 132 ESEAGVEACLA-ANLEIHGKPIEVKKAQPRGNLRDDDDAARRGGAGAKFGR 181
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
Query: 187 IFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNP 246
+F+GGL+ E D+ ++ +F+QFG ++E + D + + + F F+TF+ + ++++
Sbjct: 1 MFIGGLNWETTDQSLRDYFSQFGEVVECTVMRDGATGRSRGFGFLTFK-DPKTVNIVMVK 59
Query: 247 KQKINDKEVDVKKATPKPE 265
+ ++ K +D K+A P+ E
Sbjct: 60 EHYLDGKIIDPKRAIPRDE 78
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 34/51 (66%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYF 658
+ L+++FS++GE+ T+ D TGRSRGF F+ FKD +++ V++ Y
Sbjct: 13 QSLRDYFSQFGEVVECTVMRDGATGRSRGFGFLTFKDPKTVNIVMVKEHYL 63
Score = 43.1 bits (100), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 601 GIVDKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLE 649
G+ + T+ E +E+F+++G + + TL D +TGR RGF F+ F+ +E
Sbjct: 89 GVSQETTDHEFREYFAQFGRVVDATLMMDKDTGRPRGFGFVTFESEAGVE 138
>gi|238501964|ref|XP_002382216.1| heterogeneous nuclear ribonucleoprotein HRP1 [Aspergillus flavus
NRRL3357]
gi|83767075|dbj|BAE57215.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220692453|gb|EED48800.1| heterogeneous nuclear ribonucleoprotein HRP1 [Aspergillus flavus
NRRL3357]
Length = 445
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 92/150 (61%), Gaps = 2/150 (1%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+ LK++FS++GE++ T+ D TGRSRGF F+ F+D +++ V++ +G +I+ K
Sbjct: 13 QSLKDYFSQFGEVQECTVMRDSATGRSRGFGFLTFRDPKTVNTVMVKEHYLDG-KIIDPK 71
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
+ + + K+ KIFVGG+S E +++ K F QFG +++ + DK + + F F+TF
Sbjct: 72 RAIPRDEQEKTSKIFVGGVSQEANEQDFKQFFMQFGRVVDATLMIDKDTGRPRGFGFVTF 131
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ E+ V L P + I K ++VKKA P+
Sbjct: 132 DSEAAVEAALSRPLE-ILGKPIEVKKAQPR 160
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 35/51 (68%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYF 658
+ LK++FS++GE++ T+ D TGRSRGF F+ F+D +++ V++ Y
Sbjct: 13 QSLKDYFSQFGEVQECTVMRDSATGRSRGFGFLTFRDPKTVNTVMVKEHYL 63
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 187 IFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNP 246
+F+GGL+ E D+ +K +F+QFG + E + D + + + F F+TF V ++
Sbjct: 1 MFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDSATGRSRGFGFLTFRDPKTVNTVMVK- 59
Query: 247 KQKINDKEVDVKKATPKPE 265
+ ++ K +D K+A P+ E
Sbjct: 60 EHYLDGKIIDPKRAIPRDE 78
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 27/44 (61%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
++ K+ F ++G + + TL D +TGR RGF F+ F ++E A
Sbjct: 97 QDFKQFFMQFGRVVDATLMIDKDTGRPRGFGFVTFDSEAAVEAA 140
>gi|255560914|ref|XP_002521470.1| RNA binding protein, putative [Ricinus communis]
gi|223539369|gb|EEF40960.1| RNA binding protein, putative [Ricinus communis]
Length = 2256
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/186 (36%), Positives = 101/186 (54%), Gaps = 18/186 (9%)
Query: 93 FYIMEAKNKMVSHPGIVHKIT-EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDT 151
FY EA+ + + G+ + T + +HF KYGEI + + D TG+ RGF F+ + D
Sbjct: 1919 FYKREARRRKIFIGGLARETTTAQFVKHFGKYGEITDSVIMKDRKTGQPRGFGFVTYAD- 1977
Query: 152 ESLEKASVEDVIAEGNHVINNKKIEAKKAKAKSG---------KIFVGGLSPEMKDEEIK 202
SV D + + +HVIN K++E K+ K KIFVGG+ + + E K
Sbjct: 1978 -----PSVVDQVIQDSHVINGKQVEIKRTIPKGAIGARDFKTKKIFVGGIPTTVTEVEFK 2032
Query: 203 AHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLL-KNPKQKINDKEVDVKKAT 261
F Q+G +IE ++ D S ++ + F FITF+ E V DLL K K ++ +V++KKA
Sbjct: 2033 EFFMQYGEVIEHQIMRDHSTNRSRGFGFITFDTEQAVDDLLAKGNKLELAGGQVEIKKAE 2092
Query: 262 P-KPEP 266
P KP P
Sbjct: 2093 PKKPNP 2098
Score = 43.9 bits (102), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 587 FYIVEAKNKMVSHPGIV-DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDT 645
FY EA+ + + G+ + T + +HF KYGEI + + D TG+ RGF F+ + D
Sbjct: 1919 FYKREARRRKIFIGGLARETTTAQFVKHFGKYGEITDSVIMKDRKTGQPRGFGFVTYADP 1978
Query: 646 ESLEKA 651
+++
Sbjct: 1979 SVVDQV 1984
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 37/59 (62%), Gaps = 2/59 (3%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLL-KNPKQKINDKEVDVKKATP-KPEP 500
E+IE ++ D S ++ + F FITF+ E V DLL K K ++ +V++KKA P KP P
Sbjct: 2040 EVIEHQIMRDHSTNRSRGFGFITFDTEQAVDDLLAKGNKLELAGGQVEIKKAEPKKPNP 2098
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Query: 593 KNKMVSHPGIVDKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTE 646
K K + GI +TE E KE F +YGE+ + D +T RSRGF FI F DTE
Sbjct: 2013 KTKKIFVGGIPTTVTEVEFKEFFMQYGEVIEHQIMRDHSTNRSRGFGFITF-DTE 2066
>gi|406601704|emb|CCH46665.1| putative RNA-binding protein [Wickerhamomyces ciferrii]
Length = 479
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/155 (35%), Positives = 95/155 (61%), Gaps = 11/155 (7%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
E LKE+FSK+GE+ + T+ + +TGRSRGF F+ F + S+ D + + HV++ K
Sbjct: 142 ERLKEYFSKFGEVIDHTIMRESSTGRSRGFGFLTFAEPRSV------DEVVKTEHVLDGK 195
Query: 174 KIEAKKA-----KAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNF 228
I+ K+A + K+GKIFVGG++PE++ +E + F +FG II+ ++ DK + + F
Sbjct: 196 VIDPKRAIPRDEQDKTGKIFVGGIAPEVRPKEFENFFGKFGTIIDAQLMLDKDTGRSRGF 255
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
F+TF+ V + + N ++++VK+A P+
Sbjct: 256 GFVTFDAPDAVDRVCQGRYLDFNGRQIEVKRAEPR 290
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 64/115 (55%), Gaps = 4/115 (3%)
Query: 151 TESLEKASVEDVIAEGNHVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGN 210
+ES+ ++ E I+ + + K++ + AK +F+GGL + +E +K +F++FG
Sbjct: 97 SESINESKTESNISSNPNPSSQHKVDLSRDAAK---MFIGGLDWDTSEERLKEYFSKFGE 153
Query: 211 IIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE 265
+I+ + + S + + F F+TF V +++K + ++ K +D K+A P+ E
Sbjct: 154 VIDHTIMRESSTGRSRGFGFLTFAEPRSVDEVVKT-EHVLDGKVIDPKRAIPRDE 207
Score = 47.0 bits (110), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 33/47 (70%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D E LKE+FSK+GE+ + T+ + +TGRSRGF F+ F + S+++
Sbjct: 138 DTSEERLKEYFSKFGEVIDHTIMRESSTGRSRGFGFLTFAEPRSVDE 184
>gi|241953399|ref|XP_002419421.1| cleavage and polyadenylation factor CF I component, putative;
nuclear polyadenylated RNA-binding protein, putative
[Candida dubliniensis CD36]
gi|223642761|emb|CAX43015.1| cleavage and polyadenylation factor CF I component, putative
[Candida dubliniensis CD36]
Length = 505
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/163 (36%), Positives = 93/163 (57%), Gaps = 12/163 (7%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ TEE L HF KYG I + T+ D TGRSRGF F+ F+D +S+ D + +
Sbjct: 192 GLSWDTTEEALVSHFQKYGNIVDYTIMKDSATGRSRGFGFLTFEDAKSV------DALLK 245
Query: 166 GNHVINNKKIEAKKA-----KAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDK 220
HV++ K I+ K+A + K GKIFVGG+ P + +EE F+QFG II+ ++ DK
Sbjct: 246 DRHVLDGKLIDPKRAISKEDQEKVGKIFVGGIDPMVTEEEFDNFFSQFGKIIDCQLMIDK 305
Query: 221 SKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ + F F+T++ + V + N + K ++VK+A P+
Sbjct: 306 DTGRSRGFGFVTYDSPAAVDKVCVNKYLTLKGKAMEVKRAAPR 348
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Query: 180 AKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVV 239
A S K F+GGLS + +E + +HF ++GNI++ + D + + + F F+TFE V
Sbjct: 181 AGGPSRKCFIGGLSWDTTEEALVSHFQKYGNIVDYTIMKDSATGRSRGFGFLTFEDAKSV 240
Query: 240 IDLLKNPKQKINDKEVDVKKATPK 263
LLK+ + ++ K +D K+A K
Sbjct: 241 DALLKD-RHVLDGKLIDPKRAISK 263
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 29/46 (63%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLE 649
D E L HF KYG I + T+ D TGRSRGF F+ F+D +S++
Sbjct: 196 DTTEEALVSHFQKYGNIVDYTIMKDSATGRSRGFGFLTFEDAKSVD 241
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASV 653
GI +TEE FS++G+I + L D +TGRSRGF F+ + +++K V
Sbjct: 276 GIDPMVTEEEFDNFFSQFGKIIDCQLMIDKDTGRSRGFGFVTYDSPAAVDKVCV 329
>gi|357495375|ref|XP_003617976.1| Heterogeneous nuclear ribonucleoprotein A1, A2/B1-like protein
[Medicago truncatula]
gi|355519311|gb|AET00935.1| Heterogeneous nuclear ribonucleoprotein A1, A2/B1-like protein
[Medicago truncatula]
Length = 479
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/171 (33%), Positives = 91/171 (53%), Gaps = 27/171 (15%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
E L+E+FS YGE++ + D TGR+RGF F+VF D +V D++ + H I+ +
Sbjct: 20 ERLREYFSTYGEVKEAVIMKDRTTGRARGFGFVVFID------PAVADIVVQEKHNIDGR 73
Query: 174 KIEAKKA---------------------KAKSGKIFVGGLSPEMKDEEIKAHFAQFGNII 212
+EAKKA ++ KIFVGGL+ + + + K +F QFG I
Sbjct: 74 MVEAKKAVPRDDQNVLSRTSGSIHGSPGPGRTRKIFVGGLASTVTESDFKKYFDQFGTIT 133
Query: 213 ETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ + YD + + + F FIT++ E V +L ++N K V+VK+A PK
Sbjct: 134 DVVVMYDHNTQRPRGFGFITYDSEEAVDQVLLKTFHELNGKMVEVKRAVPK 184
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 50/83 (60%), Gaps = 1/83 (1%)
Query: 181 KAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVI 240
++ SGK+F+GG+S + +E ++ +F+ +G + E + D++ + + F F+ F + V
Sbjct: 2 QSDSGKLFIGGISWDTNEERLREYFSTYGEVKEAVIMKDRTTGRARGFGFVVF-IDPAVA 60
Query: 241 DLLKNPKQKINDKEVDVKKATPK 263
D++ K I+ + V+ KKA P+
Sbjct: 61 DIVVQEKHNIDGRMVEAKKAVPR 83
Score = 47.4 bits (111), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 27/41 (65%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKD 644
D E L+E+FS YGE++ + D TGR+RGF F+VF D
Sbjct: 16 DTNEERLREYFSTYGEVKEAVIMKDRTTGRARGFGFVVFID 56
>gi|321475556|gb|EFX86518.1| hypothetical protein DAPPUDRAFT_44313 [Daphnia pulex]
Length = 195
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/160 (38%), Positives = 93/160 (58%), Gaps = 15/160 (9%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++L+E+F +YG I +V + DP T RSRGF FI F E +SV+ V+A H ++ K
Sbjct: 37 DKLREYFGQYGTIIDVQVLKDPLTQRSRGFGFITF-----AEASSVDRVLAVPAHTLDGK 91
Query: 174 KIEAKKA----------KAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKS 223
KI+ K A +K+ K+FVGG+S + +E+KA+F QFG + E M D+
Sbjct: 92 KIDPKHATPKNKGKATPSSKTKKVFVGGVSQDTSADEVKAYFNQFGRVEEAVMLMDQQTK 151
Query: 224 QRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ + F F+TFE E VV + + I +K+V+ KKA PK
Sbjct: 152 RHRGFGFVTFESEDVVDRICEIHYHTIKNKKVECKKAQPK 191
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 47/78 (60%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+FVGGLS + ++++ +F Q+G II+ ++ D + + F FITF S V +L
Sbjct: 24 KLFVGGLSWQTSADKLREYFGQYGTIIDVQVLKDPLTQRSRGFGFITFAEASSVDRVLAV 83
Query: 246 PKQKINDKEVDVKKATPK 263
P ++ K++D K ATPK
Sbjct: 84 PAHTLDGKKIDPKHATPK 101
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 30/43 (69%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
++L+E+F +YG I +V + DP T RSRGF FI F + S+++
Sbjct: 37 DKLREYFGQYGTIIDVQVLKDPLTQRSRGFGFITFAEASSVDR 79
>gi|85101893|ref|XP_961230.1| hypothetical protein NCU04239 [Neurospora crassa OR74A]
gi|11595517|emb|CAC18311.1| related to heterogeneous nuclear ribonucleoprotein [Neurospora
crassa]
gi|28922772|gb|EAA31994.1| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 503
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 55/150 (36%), Positives = 93/150 (62%), Gaps = 2/150 (1%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+ L+++FS++GE+ T+ D TGRSRGF F+ FKD +++ V++ +G +I+ K
Sbjct: 13 QSLRDYFSQFGEVVECTVMRDGATGRSRGFGFLTFKDPKTVNIVMVKEHYLDGK-IIDPK 71
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
+ + + K+ KIFVGG+S E D E + +FAQFG +++ + DK + + F F+TF
Sbjct: 72 RAIPRDEQEKTSKIFVGGVSQETTDHEFREYFAQFGRVVDATLMMDKDTGRPRGFGFVTF 131
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKATPK 263
E E+ V L + +I+ K ++VKKA P+
Sbjct: 132 ESEAGVEACL-SANLEIHGKPIEVKKAQPR 160
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
Query: 187 IFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNP 246
+F+GGL+ E D+ ++ +F+QFG ++E + D + + + F F+TF+ V +++
Sbjct: 1 MFIGGLNWETTDQSLRDYFSQFGEVVECTVMRDGATGRSRGFGFLTFKDPKTV-NIVMVK 59
Query: 247 KQKINDKEVDVKKATPKPE 265
+ ++ K +D K+A P+ E
Sbjct: 60 EHYLDGKIIDPKRAIPRDE 78
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 34/51 (66%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYF 658
+ L+++FS++GE+ T+ D TGRSRGF F+ FKD +++ V++ Y
Sbjct: 13 QSLRDYFSQFGEVVECTVMRDGATGRSRGFGFLTFKDPKTVNIVMVKEHYL 63
Score = 43.5 bits (101), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 601 GIVDKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLE 649
G+ + T+ E +E+F+++G + + TL D +TGR RGF F+ F+ +E
Sbjct: 89 GVSQETTDHEFREYFAQFGRVVDATLMMDKDTGRPRGFGFVTFESEAGVE 138
>gi|361131862|gb|EHL03497.1| putative Uncharacterized RNA-binding protein [Glarea lozoyensis
74030]
Length = 467
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 92/150 (61%), Gaps = 2/150 (1%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
E LKE+FS++GE+ T+ D +GRSRGF F+ FKD ++ V++ +G +I+ K
Sbjct: 13 ESLKEYFSQFGEVLECTVMRDGASGRSRGFGFLTFKDARTVNIVMVKEHYLDGK-IIDPK 71
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
+ + + ++ KIFVGG+S E +++ K +F QFG +++ + DK + + F F+TF
Sbjct: 72 RAIPRDEQERTSKIFVGGVSQEATEQDFKQYFMQFGRVVDATLMMDKDTGRPRGFGFVTF 131
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ E+ V L+ P + I K ++VKKA P+
Sbjct: 132 DSEAAVEACLEGPLE-ILGKPIEVKKAQPR 160
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 187 IFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNP 246
+F+GGL+ E DE +K +F+QFG ++E + D + + + F F+TF+ ++ ++++
Sbjct: 1 MFIGGLNWETTDESLKEYFSQFGEVLECTVMRDGASGRSRGFGFLTFK-DARTVNIVMVK 59
Query: 247 KQKINDKEVDVKKATPKPE 265
+ ++ K +D K+A P+ E
Sbjct: 60 EHYLDGKIIDPKRAIPRDE 78
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 33/51 (64%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYF 658
E LKE+FS++GE+ T+ D +GRSRGF F+ FKD ++ V++ Y
Sbjct: 13 ESLKEYFSQFGEVLECTVMRDGASGRSRGFGFLTFKDARTVNIVMVKEHYL 63
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 36/55 (65%), Gaps = 2/55 (3%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVE 654
G+ + TE+ K++F ++G + + TL D +TGR RGF F+ F D+E+ +A +E
Sbjct: 89 GVSQEATEQDFKQYFMQFGRVVDATLMMDKDTGRPRGFGFVTF-DSEAAVEACLE 142
>gi|46137515|ref|XP_390449.1| hypothetical protein FG10273.1 [Gibberella zeae PH-1]
Length = 552
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 96/154 (62%), Gaps = 5/154 (3%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVI--- 170
+ L+++F+++GE+ T+ D +TGRSRGF F+ FKD +++ V++ +G +I
Sbjct: 135 QSLRDYFAQFGEVVECTVMRDSSTGRSRGFGFLTFKDAKTVNIVMVKEHFLDGKILILLQ 194
Query: 171 -NNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFC 229
+ K+ + + K+ KIFVGG+S E D+E K +FAQFG +++ + DK + + F
Sbjct: 195 IDPKRAIPRDEQEKTSKIFVGGVSQETTDQEFKEYFAQFGRVVDATLMMDKDTGRPRGFG 254
Query: 230 FITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
F+TFE+E+ V D N +I+ K ++VKKA P+
Sbjct: 255 FVTFENEAGV-DACINVPLEIHGKPIEVKKAQPR 287
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 57/93 (61%), Gaps = 7/93 (7%)
Query: 179 KAKAK-SGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHES 237
KA AK GK+F+GGL+ E D+ ++ +FAQFG ++E + D S + + F F+TF+ ++
Sbjct: 114 KASAKEDGKMFIGGLNWETTDQSLRDYFAQFGEVVECTVMRDSSTGRSRGFGFLTFK-DA 172
Query: 238 VVIDLLKNPKQKINDK-----EVDVKKATPKPE 265
++++ + ++ K ++D K+A P+ E
Sbjct: 173 KTVNIVMVKEHFLDGKILILLQIDPKRAIPRDE 205
Score = 47.0 bits (110), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 35/51 (68%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYF 658
+ L+++F+++GE+ T+ D +TGRSRGF F+ FKD +++ V++ +
Sbjct: 135 QSLRDYFAQFGEVVECTVMRDSSTGRSRGFGFLTFKDAKTVNIVMVKEHFL 185
Score = 43.5 bits (101), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Query: 601 GIVDKIT-EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLE 649
G+ + T +E KE+F+++G + + TL D +TGR RGF F+ F++ ++
Sbjct: 216 GVSQETTDQEFKEYFAQFGRVVDATLMMDKDTGRPRGFGFVTFENEAGVD 265
>gi|195997575|ref|XP_002108656.1| hypothetical protein TRIADDRAFT_5340 [Trichoplax adhaerens]
gi|190589432|gb|EDV29454.1| hypothetical protein TRIADDRAFT_5340, partial [Trichoplax
adhaerens]
Length = 172
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 58/162 (35%), Positives = 93/162 (57%), Gaps = 10/162 (6%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + TEE +EHF K+GE+ N + DP T RSRGF FI++++ ++KA +
Sbjct: 9 GLSWETTEERFREHFEKFGEVVNCIILRDPVTKRSRGFGFIIYRNVSDIDKA-----LLH 63
Query: 166 GNHVINNKKIEAKKA----KAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKS 221
HVI+ K++E K++ + ++ KIF+GGL P DE++K +F ++G + E E+ DK
Sbjct: 64 ATHVIDGKQVEPKRSVPREQTRTKKIFIGGLPPNTSDEDLKIYFGKYGVVSEVELLRDKE 123
Query: 222 KSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ + F F++F+ L +IN K VKKA PK
Sbjct: 124 TGRLRGFGFVSFDTPEGAQKALVTKMHEINGKMAQVKKAEPK 165
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 30/44 (68%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
E +EHF K+GE+ N + DP T RSRGF FI++++ ++KA
Sbjct: 17 ERFREHFEKFGEVVNCIILRDPVTKRSRGFGFIIYRNVSDIDKA 60
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 44/80 (55%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+FVGGLS E +E + HF +FG ++ + D + + F FI + + S + L +
Sbjct: 4 KLFVGGLSWETTEERFREHFEKFGEVVNCIILRDPVTKRSRGFGFIIYRNVSDIDKALLH 63
Query: 246 PKQKINDKEVDVKKATPKPE 265
I+ K+V+ K++ P+ +
Sbjct: 64 ATHVIDGKQVEPKRSVPREQ 83
Score = 43.1 bits (100), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 29/50 (58%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVY 657
E+LK +F KYG + V L D TGR RGF F+ F E +KA V ++
Sbjct: 101 EDLKIYFGKYGVVSEVELLRDKETGRLRGFGFVSFDTPEGAQKALVTKMH 150
>gi|196010301|ref|XP_002115015.1| hypothetical protein TRIADDRAFT_28865 [Trichoplax adhaerens]
gi|190582398|gb|EDV22471.1| hypothetical protein TRIADDRAFT_28865 [Trichoplax adhaerens]
Length = 210
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/183 (35%), Positives = 98/183 (53%), Gaps = 18/183 (9%)
Query: 113 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINN 172
TE+L+E+F KYGEI + DP T RSRGF F+ F D +++EK V+ G H +++
Sbjct: 17 TEKLREYFEKYGEITECVIMHDPITKRSRGFGFVTFTDADNVEK-----VLQSGPHKLDD 71
Query: 173 KKIEAK---------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKS 223
K I+AK K ++ K+FVGG++ E+I +F FG I + + +DKS
Sbjct: 72 KNIDAKVAYPKKQRQKLVTRTKKVFVGGIATNTTTEDITKYFETFGQIEDAMLMFDKSTQ 131
Query: 224 QRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK----PEPFGVRGGRGGRGGR 279
+ + F F+ FE E + +IN+K+V+VKKA PK + G +G R
Sbjct: 132 RHRGFGFVIFESEDSADKACEVHFHEINNKKVEVKKAQPKEVMHSQTSGTKGHLKTNHNR 191
Query: 280 GGR 282
G R
Sbjct: 192 GIR 194
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 31/45 (68%)
Query: 607 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
TE+L+E+F KYGEI + DP T RSRGF F+ F D +++EK
Sbjct: 17 TEKLREYFEKYGEITECVIMHDPITKRSRGFGFVTFTDADNVEKV 61
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 47/82 (57%)
Query: 184 SGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLL 243
+ K+F+GGLS E+++ +F ++G I E + +D + + F F+TF V +L
Sbjct: 3 NSKMFIGGLSWMTNTEKLREYFEKYGEITECVIMHDPITKRSRGFGFVTFTDADNVEKVL 62
Query: 244 KNPKQKINDKEVDVKKATPKPE 265
++ K++DK +D K A PK +
Sbjct: 63 QSGPHKLDDKNIDAKVAYPKKQ 84
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 51/92 (55%), Gaps = 9/92 (9%)
Query: 575 HYLFDQNLRTHYFYIVEAKNKMVSHPGIV-------DKITEELKEHFSKYGEIENVTLKS 627
H L D+N+ Y + + K+V+ V + TE++ ++F +G+IE+ L
Sbjct: 67 HKLDDKNIDAKVAYPKKQRQKLVTRTKKVFVGGIATNTTTEDITKYFETFGQIEDAMLMF 126
Query: 628 DPNTGRSRGFAFIVFKDTESLEKASVEDVYFY 659
D +T R RGF F++F+ +S +KA +V+F+
Sbjct: 127 DKSTQRHRGFGFVIFESEDSADKAC--EVHFH 156
>gi|302914266|ref|XP_003051103.1| hypothetical protein NECHADRAFT_41418 [Nectria haematococca mpVI
77-13-4]
gi|256732041|gb|EEU45390.1| hypothetical protein NECHADRAFT_41418 [Nectria haematococca mpVI
77-13-4]
Length = 546
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 58/158 (36%), Positives = 95/158 (60%), Gaps = 9/158 (5%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHV---- 169
+ L+++FS++GE+ T+ D +TGRSRGF F+ FKD +++ V++ +G V
Sbjct: 129 QSLRDYFSQFGEVVECTVMRDSSTGRSRGFGFLTFKDAKTVNIVMVKEHFLDGKIVSYRL 188
Query: 170 ----INNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQR 225
I+ K+ + + K+ KIFVGG+S E D+E K +FAQFG +++ + DK +
Sbjct: 189 IPQQIDPKRAIPRDEQEKTSKIFVGGVSQETTDQEFKEYFAQFGRVVDATLMMDKDTGRP 248
Query: 226 KNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ F F+TFE E+ V D N +I+ K ++VKKA P+
Sbjct: 249 RGFGFVTFESEAGV-DACINVPLEIHGKPIEVKKAQPR 285
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 57/96 (59%), Gaps = 9/96 (9%)
Query: 179 KAKAK-SGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF-EHE 236
KA AK GK+F+GGL+ E D+ ++ +F+QFG ++E + D S + + F F+TF + +
Sbjct: 108 KASAKEDGKMFIGGLNWETTDQSLRDYFSQFGEVVECTVMRDSSTGRSRGFGFLTFKDAK 167
Query: 237 SVVIDLLKNP-------KQKINDKEVDVKKATPKPE 265
+V I ++K ++ +++D K+A P+ E
Sbjct: 168 TVNIVMVKEHFLDGKIVSYRLIPQQIDPKRAIPRDE 203
Score = 47.8 bits (112), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 35/51 (68%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYF 658
+ L+++FS++GE+ T+ D +TGRSRGF F+ FKD +++ V++ +
Sbjct: 129 QSLRDYFSQFGEVVECTVMRDSSTGRSRGFGFLTFKDAKTVNIVMVKEHFL 179
Score = 43.1 bits (100), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 30/44 (68%), Gaps = 1/44 (2%)
Query: 601 GIVDKIT-EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFK 643
G+ + T +E KE+F+++G + + TL D +TGR RGF F+ F+
Sbjct: 214 GVSQETTDQEFKEYFAQFGRVVDATLMMDKDTGRPRGFGFVTFE 257
>gi|89257474|gb|ABD64965.1| hypothetical protein 25.t00002 [Brassica oleracea]
Length = 445
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/176 (35%), Positives = 94/176 (53%), Gaps = 25/176 (14%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
GI + TE+ L+++F +GE+ + D +TGR+RGF F+VF D E+ +
Sbjct: 12 GISWETTEDRLRDYFQSFGEVLEAVIMKDRSTGRARGFGFLVFADPNVAERVVLL----- 66
Query: 166 GNHVINNKKIEAKKA------------------KAKSGKIFVGGLSPEMKDEEIKAHFAQ 207
HVI+ K +EAKKA A S KIFVGGL+ + + E K +FAQ
Sbjct: 67 -RHVIDGKLVEAKKAVPRDDHKSNSSLQGSSPGPANSKKIFVGGLASSVTEAEFKKYFAQ 125
Query: 208 FGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
FG I + + YD+ + + F FI++E E V +L+ ++N K V+VK A PK
Sbjct: 126 FGTITDVVVMYDQRTQRPRGFGFISYESEDAVDRVLRRTFHELNGKMVEVKLAVPK 181
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 50/85 (58%), Gaps = 5/85 (5%)
Query: 183 KSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVV--I 240
+SGK+F+GG+S E ++ ++ +F FG ++E + D+S + + F F+ F +V +
Sbjct: 4 ESGKLFIGGISWETTEDRLRDYFQSFGEVLEAVIMKDRSTGRARGFGFLVFADPNVAERV 63
Query: 241 DLLKNPKQKINDKEVDVKKATPKPE 265
LL + I+ K V+ KKA P+ +
Sbjct: 64 VLL---RHVIDGKLVEAKKAVPRDD 85
Score = 43.5 bits (101), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
GI + TE+ L+++F +GE+ + D +TGR+RGF F+VF D E+
Sbjct: 12 GISWETTEDRLRDYFQSFGEVLEAVIMKDRSTGRARGFGFLVFADPNVAER 62
>gi|47221330|emb|CAF97248.1| unnamed protein product [Tetraodon nigroviridis]
Length = 312
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 92/154 (59%), Gaps = 9/154 (5%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++LK++F+K+G++ + T+K D ++GRSRGF F++FKD S+EK V+ + H ++ +
Sbjct: 70 KDLKDYFTKFGDVSDCTIKFDSDSGRSRGFGFVLFKDPSSVEK-----VLQQKEHRLDGR 124
Query: 174 KIEAKKAKAKSG----KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFC 229
I+ K+A A KIFVGGL+PE +E I+ +F FG I ++P D +R+ F
Sbjct: 125 LIDPKRAMAMKKEPVKKIFVGGLNPEATEETIREYFGAFGEIENIDLPLDPKSKKRRGFI 184
Query: 230 FITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
FIT++ E+ L+ + ++K A PK
Sbjct: 185 FITYKEEASAKKCLEKKFHTVEGSRCELKLAQPK 218
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 56/94 (59%), Gaps = 1/94 (1%)
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
KIEA K +GK+FVGGLS + +++K +F +FG++ + + +D + + F F+ F
Sbjct: 45 KIEATKGDEDTGKMFVGGLSWDTSKKDLKDYFTKFGDVSDCTIKFDSDSGRSRGFGFVLF 104
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKATP-KPEP 266
+ S V +L+ + +++ + +D K+A K EP
Sbjct: 105 KDPSSVEKVLQQKEHRLDGRLIDPKRAMAMKKEP 138
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 37/47 (78%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D ++LK++F+K+G++ + T+K D ++GRSRGF F++FKD S+EK
Sbjct: 66 DTSKKDLKDYFTKFGDVSDCTIKFDSDSGRSRGFGFVLFKDPSSVEK 112
Score = 45.8 bits (107), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
G+ + TEE ++E+F +GEIEN+ L DP + + RGF FI +K+ S +K
Sbjct: 146 GLNPEATEETIREYFGAFGEIENIDLPLDPKSKKRRGFIFITYKEEASAKKC 197
>gi|391863705|gb|EIT73005.1| RNA-binding protein [Aspergillus oryzae 3.042]
Length = 545
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 92/150 (61%), Gaps = 2/150 (1%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+ LK++FS++GE++ T+ D TGRSRGF F+ F+D +++ V++ +G +I+ K
Sbjct: 113 QSLKDYFSQFGEVQECTVMRDSATGRSRGFGFLTFRDPKTVNTVMVKEHYLDGK-IIDPK 171
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
+ + + K+ KIFVGG+S E +++ K F QFG +++ + DK + + F F+TF
Sbjct: 172 RAIPRDEQEKTSKIFVGGVSQEANEQDFKQFFMQFGRVVDATLMIDKDTGRPRGFGFVTF 231
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ E+ V L P + I K ++VKKA P+
Sbjct: 232 DSEAAVEAALSRPLE-ILGKPIEVKKAQPR 260
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GK+F+GGL+ E D+ +K +F+QFG + E + D + + + F F+TF V ++
Sbjct: 99 GKMFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDSATGRSRGFGFLTFRDPKTVNTVMV 158
Query: 245 NPKQKINDKEVDVKKATPKPE 265
+ ++ K +D K+A P+ E
Sbjct: 159 K-EHYLDGKIIDPKRAIPRDE 178
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 35/51 (68%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYF 658
+ LK++FS++GE++ T+ D TGRSRGF F+ F+D +++ V++ Y
Sbjct: 113 QSLKDYFSQFGEVQECTVMRDSATGRSRGFGFLTFRDPKTVNTVMVKEHYL 163
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 27/44 (61%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
++ K+ F ++G + + TL D +TGR RGF F+ F ++E A
Sbjct: 197 QDFKQFFMQFGRVVDATLMIDKDTGRPRGFGFVTFDSEAAVEAA 240
>gi|238880917|gb|EEQ44555.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 475
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 60/163 (36%), Positives = 93/163 (57%), Gaps = 12/163 (7%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ TEE L HF KYG I + T+ D TGRSRGF F+ F+D +S+ D + +
Sbjct: 168 GLSWDTTEEALVSHFQKYGNIVDYTIMKDSATGRSRGFGFLTFEDAKSV------DALLK 221
Query: 166 GNHVINNKKIEAKKA-----KAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDK 220
HV++ K I+ K+A + K GKIFVGG+ P + +EE F+QFG II+ ++ DK
Sbjct: 222 DRHVLDGKLIDPKRAISKEDQEKVGKIFVGGIDPMVTEEEFDNFFSQFGKIIDCQLMIDK 281
Query: 221 SKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ + F F+T++ + V + N + K ++VK+A P+
Sbjct: 282 DTGRSRGFGFVTYDSPAAVDKVCVNKYLTLKGKAMEVKRAAPR 324
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
Query: 177 AKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHE 236
A+ A S K F+GGLS + +E + +HF ++GNI++ + D + + + F F+TFE
Sbjct: 154 AESAGGPSRKCFIGGLSWDTTEEALVSHFQKYGNIVDYTIMKDSATGRSRGFGFLTFEDA 213
Query: 237 SVVIDLLKNPKQKINDKEVDVKKATPK 263
V LLK+ + ++ K +D K+A K
Sbjct: 214 KSVDALLKD-RHVLDGKLIDPKRAISK 239
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 29/46 (63%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLE 649
D E L HF KYG I + T+ D TGRSRGF F+ F+D +S++
Sbjct: 172 DTTEEALVSHFQKYGNIVDYTIMKDSATGRSRGFGFLTFEDAKSVD 217
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASV 653
GI +TEE FS++G+I + L D +TGRSRGF F+ + +++K V
Sbjct: 252 GIDPMVTEEEFDNFFSQFGKIIDCQLMIDKDTGRSRGFGFVTYDSPAAVDKVCV 305
>gi|68465675|ref|XP_723199.1| likely RNA binding protein [Candida albicans SC5314]
gi|68465968|ref|XP_723052.1| likely RNA binding protein [Candida albicans SC5314]
gi|46445066|gb|EAL04337.1| likely RNA binding protein [Candida albicans SC5314]
gi|46445222|gb|EAL04492.1| likely RNA binding protein [Candida albicans SC5314]
Length = 475
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 60/163 (36%), Positives = 93/163 (57%), Gaps = 12/163 (7%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ TEE L HF KYG I + T+ D TGRSRGF F+ F+D +S+ D + +
Sbjct: 168 GLSWDTTEEALVSHFQKYGNIVDYTIMKDSATGRSRGFGFLTFEDAKSV------DALLK 221
Query: 166 GNHVINNKKIEAKKA-----KAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDK 220
HV++ K I+ K+A + K GKIFVGG+ P + +EE F+QFG II+ ++ DK
Sbjct: 222 DRHVLDGKLIDPKRAISKEDQEKVGKIFVGGIDPMVTEEEFDNFFSQFGKIIDCQLMIDK 281
Query: 221 SKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ + F F+T++ + V + N + K ++VK+A P+
Sbjct: 282 DTGRSRGFGFVTYDSPAAVDKVCVNKYLTLKGKAMEVKRAAPR 324
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
Query: 177 AKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHE 236
A+ A S K F+GGLS + +E + +HF ++GNI++ + D + + + F F+TFE
Sbjct: 154 AESAGGPSRKCFIGGLSWDTTEEALVSHFQKYGNIVDYTIMKDSATGRSRGFGFLTFEDA 213
Query: 237 SVVIDLLKNPKQKINDKEVDVKKATPK 263
V LLK+ + ++ K +D K+A K
Sbjct: 214 KSVDALLKD-RHVLDGKLIDPKRAISK 239
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 29/46 (63%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLE 649
D E L HF KYG I + T+ D TGRSRGF F+ F+D +S++
Sbjct: 172 DTTEEALVSHFQKYGNIVDYTIMKDSATGRSRGFGFLTFEDAKSVD 217
Score = 40.8 bits (94), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASV 653
GI +TEE FS++G+I + L D +TGRSRGF F+ + +++K V
Sbjct: 252 GIDPMVTEEEFDNFFSQFGKIIDCQLMIDKDTGRSRGFGFVTYDSPAAVDKVCV 305
>gi|157112076|ref|XP_001651782.1| heterogeneous nuclear ribonucleoprotein [Aedes aegypti]
gi|108878175|gb|EAT42400.1| AAEL006057-PA [Aedes aegypti]
Length = 482
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/160 (38%), Positives = 93/160 (58%), Gaps = 14/160 (8%)
Query: 113 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINN 172
+E+L E+F +G++ +V + DP T RSRGF FI F+ E SV+ V+ H ++
Sbjct: 115 SEKLSEYFGMFGKVTDVLIMKDPITQRSRGFGFITFQ-----EPNSVDKVLKVPIHTLDG 169
Query: 173 KKIEAKKAKAK---------SGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKS 223
KKI+ K A K + KIFVGG+S + EE++ +F+QFG + ET M D+
Sbjct: 170 KKIDPKHATPKNRPKTQSNKTKKIFVGGVSQDTSAEEVRQYFSQFGKVDETVMLMDQQTK 229
Query: 224 QRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ + F F+TFE+E VV + + I +K+V+ KKA PK
Sbjct: 230 RHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPK 269
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 47/82 (57%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GK+FVGGLS + E++ +F FG + + + D + + F FITF+ + V +LK
Sbjct: 102 GKLFVGGLSWQTSSEKLSEYFGMFGKVTDVLIMKDPITQRSRGFGFITFQEPNSVDKVLK 161
Query: 245 NPKQKINDKEVDVKKATPKPEP 266
P ++ K++D K ATPK P
Sbjct: 162 VPIHTLDGKKIDPKHATPKNRP 183
Score = 46.6 bits (109), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 31/44 (70%)
Query: 607 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+E+L E+F +G++ +V + DP T RSRGF FI F++ S++K
Sbjct: 115 SEKLSEYFGMFGKVTDVLIMKDPITQRSRGFGFITFQEPNSVDK 158
Score = 42.7 bits (99), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 38/57 (66%), Gaps = 2/57 (3%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFYS 660
D EE++++FS++G+++ + D T R RGF F+ F++ + +++ V +++F++
Sbjct: 201 DTSAEEVRQYFSQFGKVDETVMLMDQQTKRHRGFGFVTFENEDVVDR--VCEIHFHT 255
>gi|261194978|ref|XP_002623893.1| heterogeneous nuclear ribonucleoprotein HRP1 [Ajellomyces
dermatitidis SLH14081]
gi|239587765|gb|EEQ70408.1| heterogeneous nuclear ribonucleoprotein HRP1 [Ajellomyces
dermatitidis SLH14081]
gi|239610740|gb|EEQ87727.1| heterogeneous nuclear ribonucleoprotein HRP1 [Ajellomyces
dermatitidis ER-3]
gi|327348818|gb|EGE77675.1| hypothetical protein BDDG_00612 [Ajellomyces dermatitidis ATCC
18188]
Length = 530
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 92/150 (61%), Gaps = 2/150 (1%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+ LK++FS++GE++ T+ D TGRSRGF F+ FKD +++ V++ +G +I+ K
Sbjct: 13 QSLKDYFSQFGEVQECTVMRDGATGRSRGFGFLTFKDPKTVNTVMVKEHYLDGK-IIDPK 71
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
+ + + ++ KIFVGG+S E +++ K F QFG +++ + DK + + F F+TF
Sbjct: 72 RAIPRDEQERTSKIFVGGVSQEATEQDFKQFFMQFGRVVDATLMIDKDSGRPRGFGFVTF 131
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ E+ V L P + I K ++VKKA P+
Sbjct: 132 DSEAAVEATLSGPLE-ILGKPIEVKKAQPR 160
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 35/51 (68%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYF 658
+ LK++FS++GE++ T+ D TGRSRGF F+ FKD +++ V++ Y
Sbjct: 13 QSLKDYFSQFGEVQECTVMRDGATGRSRGFGFLTFKDPKTVNTVMVKEHYL 63
Score = 47.8 bits (112), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 187 IFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNP 246
+F+GGL+ E D+ +K +F+QFG + E + D + + + F F+TF+ V ++
Sbjct: 1 MFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDGATGRSRGFGFLTFKDPKTVNTVMVK- 59
Query: 247 KQKINDKEVDVKKATPKPE 265
+ ++ K +D K+A P+ E
Sbjct: 60 EHYLDGKIIDPKRAIPRDE 78
Score = 40.4 bits (93), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 35/54 (64%), Gaps = 2/54 (3%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASV 653
G+ + TE+ K+ F ++G + + TL D ++GR RGF F+ F D+E+ +A++
Sbjct: 89 GVSQEATEQDFKQFFMQFGRVVDATLMIDKDSGRPRGFGFVTF-DSEAAVEATL 141
>gi|357618214|gb|EHJ71282.1| hypothetical protein KGM_11355 [Danaus plexippus]
Length = 297
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 58/158 (36%), Positives = 92/158 (58%), Gaps = 12/158 (7%)
Query: 113 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINN 172
+E+L+E+F+ +G + +V + DP T RSRGF FI F+ E ASV+ V+A H ++
Sbjct: 43 SEKLREYFAMFGAVTDVLIMKDPVTQRSRGFGFITFQ-----EAASVDKVLAVPVHTLDG 97
Query: 173 KKIEAKKAK-------AKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQR 225
K+I+ K A AK+ KIFVGG+ + +E++A+FAQFG + + M D+ +
Sbjct: 98 KRIDPKHATPKSAPKPAKTKKIFVGGVGQDTSADEVRAYFAQFGAVEDAVMLMDQQTKRH 157
Query: 226 KNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ F F+TF E V + I +K+V+ K+A PK
Sbjct: 158 RGFGFVTFHSEEAVERVCDIHFHTIKNKKVECKRAQPK 195
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 46/81 (56%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+FVGGLS + E+++ +FA FG + + + D + + F FITF+ + V +L
Sbjct: 31 KLFVGGLSWQTSSEKLREYFAMFGAVTDVLIMKDPVTQRSRGFGFITFQEAASVDKVLAV 90
Query: 246 PKQKINDKEVDVKKATPKPEP 266
P ++ K +D K ATPK P
Sbjct: 91 PVHTLDGKRIDPKHATPKSAP 111
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 32/44 (72%)
Query: 607 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+E+L+E+F+ +G + +V + DP T RSRGF FI F++ S++K
Sbjct: 43 SEKLREYFAMFGAVTDVLIMKDPVTQRSRGFGFITFQEAASVDK 86
>gi|407928279|gb|EKG21140.1| hypothetical protein MPH_01533 [Macrophomina phaseolina MS6]
Length = 571
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/179 (34%), Positives = 105/179 (58%), Gaps = 4/179 (2%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+ L+++FS++GE+ T+ D TGRSRGF F+ F+D +++ V++ +G +I+ K
Sbjct: 116 QSLRDYFSQFGEVAECTVMRDGATGRSRGFGFLTFRDPKTVNIVMVKEHYLDG-KIIDPK 174
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
+ ++ + K+ KIFVGG+S E +++ K+ F QFG +I+ + DK + + F F+TF
Sbjct: 175 RAIPREEQEKTAKIFVGGVSQEATEQDFKSFFEQFGRVIDATLMMDKDTGRPRGFGFVTF 234
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGVRGGRGGRGGRGGR--GGRMAGGY 290
+ E+ V L+ P I K ++VK+A P+ RGG+ GR G G R GG+
Sbjct: 235 DGEAAVDACLQGPL-AILGKPIEVKRAQPRGNLKDNDDDRGGKFGRRGDKFGNRDGGGF 292
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 53/84 (63%), Gaps = 3/84 (3%)
Query: 183 KSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF-EHESVVID 241
+ GK+F+GGL+ E D+ ++ +F+QFG + E + D + + + F F+TF + ++V I
Sbjct: 100 EDGKMFIGGLNWETTDQSLRDYFSQFGEVAECTVMRDGATGRSRGFGFLTFRDPKTVNIV 159
Query: 242 LLKNPKQKINDKEVDVKKATPKPE 265
++K + ++ K +D K+A P+ E
Sbjct: 160 MVK--EHYLDGKIIDPKRAIPREE 181
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 34/51 (66%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYF 658
+ L+++FS++GE+ T+ D TGRSRGF F+ F+D +++ V++ Y
Sbjct: 116 QSLRDYFSQFGEVAECTVMRDGATGRSRGFGFLTFRDPKTVNIVMVKEHYL 166
>gi|317142958|ref|XP_001819217.2| heterogeneous nuclear ribonucleoprotein HRP1 [Aspergillus oryzae
RIB40]
Length = 557
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 92/150 (61%), Gaps = 2/150 (1%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+ LK++FS++GE++ T+ D TGRSRGF F+ F+D +++ V++ +G +I+ K
Sbjct: 125 QSLKDYFSQFGEVQECTVMRDSATGRSRGFGFLTFRDPKTVNTVMVKEHYLDGK-IIDPK 183
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
+ + + K+ KIFVGG+S E +++ K F QFG +++ + DK + + F F+TF
Sbjct: 184 RAIPRDEQEKTSKIFVGGVSQEANEQDFKQFFMQFGRVVDATLMIDKDTGRPRGFGFVTF 243
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ E+ V L P + I K ++VKKA P+
Sbjct: 244 DSEAAVEAALSRPLE-ILGKPIEVKKAQPR 272
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GK+F+GGL+ E D+ +K +F+QFG + E + D + + + F F+TF V ++
Sbjct: 111 GKMFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDSATGRSRGFGFLTFRDPKTVNTVMV 170
Query: 245 NPKQKINDKEVDVKKATPKPE 265
+ ++ K +D K+A P+ E
Sbjct: 171 K-EHYLDGKIIDPKRAIPRDE 190
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 35/51 (68%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYF 658
+ LK++FS++GE++ T+ D TGRSRGF F+ F+D +++ V++ Y
Sbjct: 125 QSLKDYFSQFGEVQECTVMRDSATGRSRGFGFLTFRDPKTVNTVMVKEHYL 175
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 27/44 (61%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
++ K+ F ++G + + TL D +TGR RGF F+ F ++E A
Sbjct: 209 QDFKQFFMQFGRVVDATLMIDKDTGRPRGFGFVTFDSEAAVEAA 252
>gi|226487556|emb|CAX74648.1| Heterogeneous nuclear ribonucleoprotein D0 [Schistosoma japonicum]
Length = 389
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 90/149 (60%), Gaps = 8/149 (5%)
Query: 115 ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNKK 174
+LKE+FS++G++ +K D TG SRGF F+ + + + K V++ H + NKK
Sbjct: 74 DLKEYFSRWGKVTQCIIKLDRFTGNSRGFGFVTLESEDCVSK-----VLSVSEHWLKNKK 128
Query: 175 IEAKKAKAKS---GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFI 231
I+ KKAK KIFVGG+ PE+ +++I+ +F+ FG + ++PYD K +RK++ F+
Sbjct: 129 IDPKKAKPSREPLRKIFVGGIDPEVTEDQIREYFSSFGKVESLDLPYDTQKGKRKHYIFV 188
Query: 232 TFEHESVVIDLLKNPKQKINDKEVDVKKA 260
+F E+ + +Q+I ++ DV+ A
Sbjct: 189 SFSTEAAARKAISKERQEIFGRQCDVRVA 217
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 48/84 (57%)
Query: 184 SGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLL 243
S K+FVGGLS E + ++K +F+++G + + + D+ + F F+T E E V +L
Sbjct: 58 SRKLFVGGLSWETNESDLKEYFSRWGKVTQCIIKLDRFTGNSRGFGFVTLESEDCVSKVL 117
Query: 244 KNPKQKINDKEVDVKKATPKPEPF 267
+ + +K++D KKA P EP
Sbjct: 118 SVSEHWLKNKKIDPKKAKPSREPL 141
Score = 39.3 bits (90), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 27/42 (64%)
Query: 609 ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+LKE+FS++G++ +K D TG SRGF F+ + + + K
Sbjct: 74 DLKEYFSRWGKVTQCIIKLDRFTGNSRGFGFVTLESEDCVSK 115
>gi|367038869|ref|XP_003649815.1| hypothetical protein THITE_2108809 [Thielavia terrestris NRRL 8126]
gi|346997076|gb|AEO63479.1| hypothetical protein THITE_2108809 [Thielavia terrestris NRRL 8126]
Length = 606
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/168 (36%), Positives = 100/168 (59%), Gaps = 7/168 (4%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+ L+++FS++GE+ T+ D TGRSRGF F+ FKD +++ V++ +G +I+ K
Sbjct: 136 QSLRDYFSQFGEVVECTVMRDGATGRSRGFGFLTFKDPKTVNIVMVKEHYLDGK-IIDPK 194
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
+ + + K+ KIFVGG+S E D E + +FAQFG +++ + DK + + F F+TF
Sbjct: 195 RAIPRDEQEKTSKIFVGGVSQETTDHEFREYFAQFGRVVDATLMMDKDTGRPRGFGFVTF 254
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKATPK-----PEPFGVRGGRGGR 276
E E+ V L K +I+ K ++VKKA P+ + RGG+ GR
Sbjct: 255 ESEAGVEACLAA-KLEIHGKPIEVKKAQPRGNLRDDDDAARRGGKFGR 301
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 52/83 (62%), Gaps = 1/83 (1%)
Query: 183 KSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDL 242
+ GK+F+GGL+ E D+ ++ +F+QFG ++E + D + + + F F+TF+ + +++
Sbjct: 120 EDGKMFIGGLNWETTDQSLRDYFSQFGEVVECTVMRDGATGRSRGFGFLTFK-DPKTVNI 178
Query: 243 LKNPKQKINDKEVDVKKATPKPE 265
+ + ++ K +D K+A P+ E
Sbjct: 179 VMVKEHYLDGKIIDPKRAIPRDE 201
Score = 47.0 bits (110), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 34/51 (66%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYF 658
+ L+++FS++GE+ T+ D TGRSRGF F+ FKD +++ V++ Y
Sbjct: 136 QSLRDYFSQFGEVVECTVMRDGATGRSRGFGFLTFKDPKTVNIVMVKEHYL 186
Score = 42.7 bits (99), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 601 GIVDKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLE 649
G+ + T+ E +E+F+++G + + TL D +TGR RGF F+ F+ +E
Sbjct: 212 GVSQETTDHEFREYFAQFGRVVDATLMMDKDTGRPRGFGFVTFESEAGVE 261
>gi|317142960|ref|XP_003189459.1| heterogeneous nuclear ribonucleoprotein HRP1 [Aspergillus oryzae
RIB40]
Length = 531
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 92/150 (61%), Gaps = 2/150 (1%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+ LK++FS++GE++ T+ D TGRSRGF F+ F+D +++ V++ +G +I+ K
Sbjct: 125 QSLKDYFSQFGEVQECTVMRDSATGRSRGFGFLTFRDPKTVNTVMVKEHYLDGK-IIDPK 183
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
+ + + K+ KIFVGG+S E +++ K F QFG +++ + DK + + F F+TF
Sbjct: 184 RAIPRDEQEKTSKIFVGGVSQEANEQDFKQFFMQFGRVVDATLMIDKDTGRPRGFGFVTF 243
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ E+ V L P + I K ++VKKA P+
Sbjct: 244 DSEAAVEAALSRPLE-ILGKPIEVKKAQPR 272
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GK+F+GGL+ E D+ +K +F+QFG + E + D + + + F F+TF V ++
Sbjct: 111 GKMFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDSATGRSRGFGFLTFRDPKTVNTVMV 170
Query: 245 NPKQKINDKEVDVKKATPKPE 265
+ ++ K +D K+A P+ E
Sbjct: 171 K-EHYLDGKIIDPKRAIPRDE 190
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 35/51 (68%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYF 658
+ LK++FS++GE++ T+ D TGRSRGF F+ F+D +++ V++ Y
Sbjct: 125 QSLKDYFSQFGEVQECTVMRDSATGRSRGFGFLTFRDPKTVNTVMVKEHYL 175
Score = 40.8 bits (94), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 27/44 (61%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
++ K+ F ++G + + TL D +TGR RGF F+ F ++E A
Sbjct: 209 QDFKQFFMQFGRVVDATLMIDKDTGRPRGFGFVTFDSEAAVEAA 252
>gi|56753309|gb|AAW24858.1| SJCHGC06087 protein [Schistosoma japonicum]
gi|226469806|emb|CAX70184.1| Heterogeneous nuclear ribonucleoprotein D0 [Schistosoma japonicum]
Length = 390
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 91/152 (59%), Gaps = 8/152 (5%)
Query: 115 ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNKK 174
+LKE+FS++G++ +K D TG SRGF F+ + + + K V++ H + NKK
Sbjct: 74 DLKEYFSRWGKVTQCIIKLDRFTGNSRGFGFVTLESEDCVSK-----VLSVSEHWLKNKK 128
Query: 175 IEAKKAKAKS---GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFI 231
I+ KKAK KIFVGG+ PE+ +++I+ +F+ FG + ++PYD K +RK++ F+
Sbjct: 129 IDPKKAKPSREPLRKIFVGGIDPEVTEDQIREYFSSFGKVESLDLPYDTQKGKRKHYIFV 188
Query: 232 TFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+F E+ + +Q+I ++ DV+ A +
Sbjct: 189 SFSTEAAARKAISKERQEIFGRQCDVRVAVTR 220
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 48/84 (57%)
Query: 184 SGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLL 243
S K+FVGGLS E + ++K +F+++G + + + D+ + F F+T E E V +L
Sbjct: 58 SRKLFVGGLSWETNESDLKEYFSRWGKVTQCIIKLDRFTGNSRGFGFVTLESEDCVSKVL 117
Query: 244 KNPKQKINDKEVDVKKATPKPEPF 267
+ + +K++D KKA P EP
Sbjct: 118 SVSEHWLKNKKIDPKKAKPSREPL 141
Score = 39.3 bits (90), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 27/42 (64%)
Query: 609 ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+LKE+FS++G++ +K D TG SRGF F+ + + + K
Sbjct: 74 DLKEYFSRWGKVTQCIIKLDRFTGNSRGFGFVTLESEDCVSK 115
>gi|345790931|ref|XP_854252.2| PREDICTED: RNA-binding protein Musashi homolog 1 [Canis lupus
familiaris]
Length = 362
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 59/167 (35%), Positives = 98/167 (58%), Gaps = 15/167 (8%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + T+E L+E+F ++GE++ + DP T RSRGF F+ F D +A V+ V+A+
Sbjct: 26 GLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMD-----QAGVDKVLAQ 80
Query: 166 GNHVINNKKIEAK---------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEM 216
H +++K I+ K K ++ KIFVGGLS E++K +F QF + + +
Sbjct: 81 SRHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFEKVDDAML 140
Query: 217 PYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+DK+ ++ + F F+TFE E +V + + +IN+K V+ KKA PK
Sbjct: 141 MFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPK 187
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 44/78 (56%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+F+GGLS + E ++ +F QFG + E + D + + F F+TF ++ V +L
Sbjct: 21 KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 80
Query: 246 PKQKINDKEVDVKKATPK 263
+ +++ K +D K A P+
Sbjct: 81 SRHELDSKTIDPKVAFPR 98
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
G+ + T+E L+E+F ++GE++ + DP T RSRGF F+ F D ++K
Sbjct: 26 GLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDK 76
Score = 40.0 bits (92), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Query: 603 VDKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFY 659
V+ E++K++F ++ ++++ L D T R RGF F+ F+ + +EK V +++F+
Sbjct: 118 VNTTVEDVKQYFEQFEKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEK--VCEIHFH 172
Score = 39.7 bits (91), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 30/46 (65%)
Query: 452 YDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 497
+DK+ ++ + F F+TFE E +V + + +IN+K V+ KKA PK
Sbjct: 142 FDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPK 187
>gi|212528804|ref|XP_002144559.1| heterogeneous nuclear ribonucleoprotein HRP1 [Talaromyces marneffei
ATCC 18224]
gi|210073957|gb|EEA28044.1| heterogeneous nuclear ribonucleoprotein HRP1 [Talaromyces marneffei
ATCC 18224]
Length = 454
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 91/150 (60%), Gaps = 2/150 (1%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+ LK++FS++GE+ T+ D TGRSRGF F+ F+D +++ V++ +G +I+ K
Sbjct: 40 QSLKDYFSQFGEVSECTVMRDSATGRSRGFGFLTFRDPKTVNTVMVKEHYLDGK-IIDPK 98
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
+ + + K+ KIFVGG+S E +++ K F QFG +++ + DK + + F F+TF
Sbjct: 99 RAIPRDEQEKTSKIFVGGVSQEATEQDFKQFFMQFGRVVDATLMIDKDTGRPRGFGFVTF 158
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ E+ V L P + I K ++VKKA P+
Sbjct: 159 DSEAAVEATLSRPLE-ILGKSIEVKKAQPR 187
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 34/51 (66%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYF 658
+ LK++FS++GE+ T+ D TGRSRGF F+ F+D +++ V++ Y
Sbjct: 40 QSLKDYFSQFGEVSECTVMRDSATGRSRGFGFLTFRDPKTVNTVMVKEHYL 90
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+F+GGL+ E D+ +K +F+QFG + E + D + + + F F+TF V ++
Sbjct: 27 KMFIGGLNWETTDQSLKDYFSQFGEVSECTVMRDSATGRSRGFGFLTFRDPKTVNTVMVK 86
Query: 246 PKQKINDKEVDVKKATPKPE 265
+ ++ K +D K+A P+ E
Sbjct: 87 -EHYLDGKIIDPKRAIPRDE 105
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 35/54 (64%), Gaps = 2/54 (3%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASV 653
G+ + TE+ K+ F ++G + + TL D +TGR RGF F+ F D+E+ +A++
Sbjct: 116 GVSQEATEQDFKQFFMQFGRVVDATLMIDKDTGRPRGFGFVTF-DSEAAVEATL 168
>gi|213408421|ref|XP_002174981.1| DAZ-associated protein [Schizosaccharomyces japonicus yFS275]
gi|212003028|gb|EEB08688.1| DAZ-associated protein [Schizosaccharomyces japonicus yFS275]
Length = 453
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 55/155 (35%), Positives = 93/155 (60%), Gaps = 11/155 (7%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
E L+++F ++GE+ + T+ D TGRSRGF F+ FKD + ++ V+ H ++ K
Sbjct: 134 ESLRDYFEQFGEVLDCTVMRDSTTGRSRGFGFLTFKDPKCVQ------VVMSKEHHLDGK 187
Query: 174 KIEAKKA-----KAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNF 228
I+ K+A + K+ K+FVGG+ + +EE + F QFG +++ + DK + + F
Sbjct: 188 IIDPKRAIPREEQEKTAKMFVGGVPADCTEEEFRDFFNQFGRVLDATLMMDKDTGRPRGF 247
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
F+TFE+E+ V + + P I+ K V+VK+ATPK
Sbjct: 248 GFVTFENEAAVENTMSQPYITIHGKPVEVKRATPK 282
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GK+F+GGL+ E DE ++ +F QFG +++ + D + + + F F+TF+ + + ++
Sbjct: 120 GKMFIGGLNWETTDESLRDYFEQFGEVLDCTVMRDSTTGRSRGFGFLTFK-DPKCVQVVM 178
Query: 245 NPKQKINDKEVDVKKATPKPE 265
+ + ++ K +D K+A P+ E
Sbjct: 179 SKEHHLDGKIIDPKRAIPREE 199
Score = 46.2 bits (108), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 30/42 (71%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLE 649
E L+++F ++GE+ + T+ D TGRSRGF F+ FKD + ++
Sbjct: 134 ESLRDYFEQFGEVLDCTVMRDSTTGRSRGFGFLTFKDPKCVQ 175
Score = 42.7 bits (99), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 30/47 (63%)
Query: 603 VDKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLE 649
D EE ++ F+++G + + TL D +TGR RGF F+ F++ ++E
Sbjct: 213 ADCTEEEFRDFFNQFGRVLDATLMMDKDTGRPRGFGFVTFENEAAVE 259
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 33/53 (62%)
Query: 445 IIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 497
+++ + DK + + F F+TFE+E+ V + + P I+ K V+VK+ATPK
Sbjct: 230 VLDATLMMDKDTGRPRGFGFVTFENEAAVENTMSQPYITIHGKPVEVKRATPK 282
>gi|50305631|ref|XP_452776.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49641909|emb|CAH01627.1| KLLA0C12925p [Kluyveromyces lactis]
Length = 570
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 57/163 (34%), Positives = 99/163 (60%), Gaps = 12/163 (7%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + TEE L+++FSKYG + V + D TGRSRGF F+ F E AS D + +
Sbjct: 192 GLNWETTEEGLRDYFSKYGAVAEVKIMKDTATGRSRGFGFLTF------ENASSVDEVVK 245
Query: 166 GNHVINNKKIEAKKA-----KAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDK 220
H+++ K I+ K+A + K+GKIFVGG+ P+++ +E + F+Q+G+II+ ++ DK
Sbjct: 246 TQHILDGKVIDPKRAIPREEQDKTGKIFVGGIGPDVRPKEFEEFFSQWGSIIDAQLMLDK 305
Query: 221 SKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ + F FIT++ V + +N + K++++K+A P+
Sbjct: 306 DTGRSRGFGFITYDTPDAVDRVCQNKFIEFKGKQIEIKRAEPR 348
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 52/80 (65%), Gaps = 1/80 (1%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+F+GGL+ E +E ++ +F+++G + E ++ D + + + F F+TFE+ S V +++K
Sbjct: 187 KMFIGGLNWETTEEGLRDYFSKYGAVAEVKIMKDTATGRSRGFGFLTFENASSVDEVVKT 246
Query: 246 PKQKINDKEVDVKKATPKPE 265
+ ++ K +D K+A P+ E
Sbjct: 247 -QHILDGKVIDPKRAIPREE 265
Score = 46.6 bits (109), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
G+ + TEE L+++FSKYG + V + D TGRSRGF F+ F++ S+++
Sbjct: 192 GLNWETTEEGLRDYFSKYGAVAEVKIMKDTATGRSRGFGFLTFENASSVDE 242
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 29/43 (67%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+E +E FS++G I + L D +TGRSRGF FI + +++++
Sbjct: 284 KEFEEFFSQWGSIIDAQLMLDKDTGRSRGFGFITYDTPDAVDR 326
>gi|366988347|ref|XP_003673940.1| hypothetical protein NCAS_0A10010 [Naumovozyma castellii CBS 4309]
gi|342299803|emb|CCC67559.1| hypothetical protein NCAS_0A10010 [Naumovozyma castellii CBS 4309]
Length = 506
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 102/176 (57%), Gaps = 12/176 (6%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + TE+ LK++FSKYG + ++ + D TGRSRGF F+ F E +S D + +
Sbjct: 199 GLNWETTEDKLKDYFSKYGNVVDLKIMKDNATGRSRGFGFLTF------ELSSSVDEVVK 252
Query: 166 GNHVINNKKIEAKKA-----KAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDK 220
H+++ K I+ K+A + K+GKIFVGG+ P+++ +E + FAQ+G II+ ++ DK
Sbjct: 253 TQHILDGKVIDPKRAIPREEQDKTGKIFVGGIGPDVRPKEFEEFFAQWGTIIDAQLMLDK 312
Query: 221 SKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGVRGGRGGR 276
+ + F FIT++ V + +N K++++K+A P+ G GR R
Sbjct: 313 DTGRSRGFGFITYDSSEAVDRVCQNKYIDFKGKQIEIKRAAPRHMQKGANNGRNPR 368
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 54/80 (67%), Gaps = 1/80 (1%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+F+GGL+ E ++++K +F+++GN+++ ++ D + + + F F+TFE S V +++K
Sbjct: 194 KLFIGGLNWETTEDKLKDYFSKYGNVVDLKIMKDNATGRSRGFGFLTFELSSSVDEVVKT 253
Query: 246 PKQKINDKEVDVKKATPKPE 265
+ ++ K +D K+A P+ E
Sbjct: 254 -QHILDGKVIDPKRAIPREE 272
Score = 43.5 bits (101), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 32/43 (74%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
++LK++FSKYG + ++ + D TGRSRGF F+ F+ + S+++
Sbjct: 207 DKLKDYFSKYGNVVDLKIMKDNATGRSRGFGFLTFELSSSVDE 249
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 30/43 (69%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+E +E F+++G I + L D +TGRSRGF FI + +E++++
Sbjct: 291 KEFEEFFAQWGTIIDAQLMLDKDTGRSRGFGFITYDSSEAVDR 333
>gi|402081154|gb|EJT76299.1| hypothetical protein GGTG_06219 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 618
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 94/150 (62%), Gaps = 2/150 (1%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+ L+E+FS++GE+ T+ D +TGRSRGF F+ FKD +++ V++ +G +I+ K
Sbjct: 130 QSLREYFSQFGEVIECTVMRDGSTGRSRGFGFLTFKDPKTVNIVMVKEHYLDG-KIIDPK 188
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
+ + + K+ KIFVGG+S + D+E K FAQFG +++ + DK + + F F+TF
Sbjct: 189 RAIPRDEQEKTSKIFVGGVSQDTTDQEFKDFFAQFGRVVDATLMMDKDTGRPRGFGFVTF 248
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKATPK 263
E E+ V L + +I+ K ++VKKA P+
Sbjct: 249 ESEAGVDACLAQ-ELEIHGKPIEVKKAQPR 277
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 54/84 (64%), Gaps = 3/84 (3%)
Query: 183 KSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF-EHESVVID 241
+ GK+F+GGL+ E D+ ++ +F+QFG +IE + D S + + F F+TF + ++V I
Sbjct: 114 EDGKMFIGGLNWETTDQSLREYFSQFGEVIECTVMRDGSTGRSRGFGFLTFKDPKTVNIV 173
Query: 242 LLKNPKQKINDKEVDVKKATPKPE 265
++K + ++ K +D K+A P+ E
Sbjct: 174 MVK--EHYLDGKIIDPKRAIPRDE 195
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 35/51 (68%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYF 658
+ L+E+FS++GE+ T+ D +TGRSRGF F+ FKD +++ V++ Y
Sbjct: 130 QSLREYFSQFGEVIECTVMRDGSTGRSRGFGFLTFKDPKTVNIVMVKEHYL 180
Score = 42.0 bits (97), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 31/53 (58%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDV 656
D +E K+ F+++G + + TL D +TGR RGF F+ F+ ++ +++
Sbjct: 210 DTTDQEFKDFFAQFGRVVDATLMMDKDTGRPRGFGFVTFESEAGVDACLAQEL 262
>gi|356535448|ref|XP_003536257.1| PREDICTED: RNA-binding protein Musashi homolog 1-like [Glycine max]
Length = 471
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 98/185 (52%), Gaps = 34/185 (18%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
GI TE+ LKEHF YG++ + ++ + NTG+ RGF F+VF D L++ + E
Sbjct: 12 GISWDTTEDKLKEHFGNYGDVLSTSVMREKNTGKPRGFGFVVFADPNILDR------VLE 65
Query: 166 GNHVINNKKIEAKKA---------------KAKSG------------KIFVGGLSPEMKD 198
HVI+ + ++AKKA + SG KIFVGGL P + +
Sbjct: 66 DKHVIDGRTVDAKKAFSREDQQISVTSRGGNSNSGMNSGNGGNIRTKKIFVGGLPPTLTE 125
Query: 199 EEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVK 258
E+ + +F +GN+ + + YD++ + + F FI+F+ E V +L +N K+V+VK
Sbjct: 126 EKFRQYFESYGNVTDVVVMYDQNTGRPRGFGFISFDTEDAVDRVLHKSFHDLNGKQVEVK 185
Query: 259 KATPK 263
+A PK
Sbjct: 186 RALPK 190
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 59/105 (56%), Gaps = 4/105 (3%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GK+F+GG+S + ++++K HF +G+++ T + +K+ + + F F+ F +++ +L+
Sbjct: 6 GKLFIGGISWDTTEDKLKEHFGNYGDVLSTSVMREKNTGKPRGFGFVVFADPNILDRVLE 65
Query: 245 NPKQKINDKEVDVKKATPKPE---PFGVRGGRGGRGGRGGRGGRM 286
+ K I+ + VD KKA + + RGG G G GG +
Sbjct: 66 D-KHVIDGRTVDAKKAFSREDQQISVTSRGGNSNSGMNSGNGGNI 109
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D ++LKEHF YG++ + ++ + NTG+ RGF F+VF D L++
Sbjct: 16 DTTEDKLKEHFGNYGDVLSTSVMREKNTGKPRGFGFVVFADPNILDR 62
Score = 44.3 bits (103), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
G+ +TEE +++F YG + +V + D NTGR RGF FI F +++++
Sbjct: 118 GLPPTLTEEKFRQYFESYGNVTDVVVMYDQNTGRPRGFGFISFDTEDAVDR 168
Score = 38.9 bits (89), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 31/54 (57%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 497
+ + + YD++ + + F FI+F+ E V +L +N K+V+VK+A PK
Sbjct: 137 NVTDVVVMYDQNTGRPRGFGFISFDTEDAVDRVLHKSFHDLNGKQVEVKRALPK 190
>gi|425766220|gb|EKV04844.1| Heterogeneous nuclear ribonucleoprotein HRP1 [Penicillium digitatum
PHI26]
gi|425779142|gb|EKV17231.1| Heterogeneous nuclear ribonucleoprotein HRP1 [Penicillium digitatum
Pd1]
Length = 447
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 61/178 (34%), Positives = 100/178 (56%), Gaps = 13/178 (7%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
E L+++FS++GE++ T+ D TGRSRGF F+ F+D +++ V++ +G +I+ K
Sbjct: 11 ESLRDYFSQFGEVQECTVMRDSATGRSRGFGFLTFRDAKTVNTVMVKEHYLDGK-IIDPK 69
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
+ + + K+ KIFVGG+S E +++ K F QFG +++ + DK + + F F+TF
Sbjct: 70 RAIPRDEQEKTSKIFVGGVSQEATEQDFKQFFMQFGRVVDATLMMDKDTGRPRGFGFVTF 129
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGVRGGRGG-RGGRGGRGGRMAGGY 290
+ ++ V L P + I K ++VKKA P RG R RGG GGY
Sbjct: 130 DGDAAVEKALSRPLE-ILGKPIEVKKAQP----------RGNLRENNDQRGGHRNGGY 176
Score = 52.4 bits (124), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 35/51 (68%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYF 658
E L+++FS++GE++ T+ D TGRSRGF F+ F+D +++ V++ Y
Sbjct: 11 ESLRDYFSQFGEVQECTVMRDSATGRSRGFGFLTFRDAKTVNTVMVKEHYL 61
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
G+ + TE+ K+ F ++G + + TL D +TGR RGF F+ F ++EKA
Sbjct: 87 GVSQEATEQDFKQFFMQFGRVVDATLMMDKDTGRPRGFGFVTFDGDAAVEKA 138
>gi|340515592|gb|EGR45845.1| predicted protein [Trichoderma reesei QM6a]
Length = 515
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 95/150 (63%), Gaps = 2/150 (1%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+ L+++FS++GE+ T+ D ++GRSRGF F+ FKD +++ V++ +G +I+ K
Sbjct: 126 QSLRDYFSQFGEVVECTVMRDSSSGRSRGFGFLTFKDPKTVNIVMVKEHFLDG-KIIDPK 184
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
+ + + K+ KIFVGG+S + D+E + +FAQFG +++ + DK + + F F+TF
Sbjct: 185 RAIPRDEQEKTSKIFVGGVSQDTTDQEFREYFAQFGRVVDATLMMDKDTGRPRGFGFVTF 244
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKATPK 263
E E+ V D N +I+ K ++VKKA P+
Sbjct: 245 ESEAGV-DACINVPLEIHGKPIEVKKAQPR 273
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 57/89 (64%), Gaps = 4/89 (4%)
Query: 179 KAKAK-SGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF-EHE 236
KA AK GK+F+GGL+ E D+ ++ +F+QFG ++E + D S + + F F+TF + +
Sbjct: 105 KASAKEDGKMFIGGLNWETTDQSLRDYFSQFGEVVECTVMRDSSSGRSRGFGFLTFKDPK 164
Query: 237 SVVIDLLKNPKQKINDKEVDVKKATPKPE 265
+V I ++K + ++ K +D K+A P+ E
Sbjct: 165 TVNIVMVK--EHFLDGKIIDPKRAIPRDE 191
Score = 45.8 bits (107), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 35/51 (68%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYF 658
+ L+++FS++GE+ T+ D ++GRSRGF F+ FKD +++ V++ +
Sbjct: 126 QSLRDYFSQFGEVVECTVMRDSSSGRSRGFGFLTFKDPKTVNIVMVKEHFL 176
Score = 43.5 bits (101), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 27/40 (67%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFK 643
D +E +E+F+++G + + TL D +TGR RGF F+ F+
Sbjct: 206 DTTDQEFREYFAQFGRVVDATLMMDKDTGRPRGFGFVTFE 245
>gi|260942727|ref|XP_002615662.1| hypothetical protein CLUG_04544 [Clavispora lusitaniae ATCC 42720]
gi|238850952|gb|EEQ40416.1| hypothetical protein CLUG_04544 [Clavispora lusitaniae ATCC 42720]
Length = 527
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 59/158 (37%), Positives = 96/158 (60%), Gaps = 2/158 (1%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ TEE L +FSKYGEI + T+ D +TGRSRGF F+ FKD ++++ +D I +
Sbjct: 169 GLNWDTTEEGLVSYFSKYGEILDYTIMKDASTGRSRGFGFLTFKDPRAVDEVIKKDHILD 228
Query: 166 GNHVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQR 225
G +I+ K+ A++ + K GKIFVGG+ P + + + F+QFG+II+ ++ DK +
Sbjct: 229 G-KLIDPKRAIAREEQDKVGKIFVGGIDPLVNERDFNDFFSQFGHIIDAQLMIDKDTGRS 287
Query: 226 KNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ F FIT++ V + N + K ++VK+A P+
Sbjct: 288 RGFGFITYDSPEAVDRVCVNKYLTLKGKAMEVKRAEPR 325
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 34/52 (65%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVED 655
D E L +FSKYGEI + T+ D +TGRSRGF F+ FKD ++++ +D
Sbjct: 173 DTTEEGLVSYFSKYGEILDYTIMKDASTGRSRGFGFLTFKDPRAVDEVIKKD 224
Score = 46.6 bits (109), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 55/96 (57%), Gaps = 3/96 (3%)
Query: 171 NNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCF 230
N+ K+ SGK+F+GGL+ + +E + ++F+++G I++ + D S + + F F
Sbjct: 149 NSSKMAPSNLGRDSGKMFIGGLNWDTTEEGLVSYFSKYGEILDYTIMKDASTGRSRGFGF 208
Query: 231 ITFEHESVVIDLLKNPKQKIND-KEVDVKKATPKPE 265
+TF+ V +++K K I D K +D K+A + E
Sbjct: 209 LTFKDPRAVDEVIK--KDHILDGKLIDPKRAIAREE 242
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Query: 601 GIVDKITEE--LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASV 653
G +D + E + FS++G I + L D +TGRSRGF FI + E++++ V
Sbjct: 252 GGIDPLVNERDFNDFFSQFGHIIDAQLMIDKDTGRSRGFGFITYDSPEAVDRVCV 306
>gi|350294627|gb|EGZ75712.1| RNA-binding domain-containing protein [Neurospora tetrasperma FGSC
2509]
Length = 324
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 55/150 (36%), Positives = 93/150 (62%), Gaps = 2/150 (1%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+ L+++FS++GE+ T+ D TGRSRGF F+ FKD +++ V++ +G +I+ K
Sbjct: 13 QSLRDYFSQFGEVVECTVMRDGATGRSRGFGFLTFKDPKTVNIVMVKEHYLDGK-IIDPK 71
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
+ + + K+ KIFVGG+S E D E + +FAQFG +++ + DK + + F F+TF
Sbjct: 72 RAIPRDEQEKTSKIFVGGVSQETTDHEFREYFAQFGRVVDATLMMDKDTGRPRGFGFVTF 131
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKATPK 263
E E+ V L + +I+ K ++VKKA P+
Sbjct: 132 ESEAGVEACL-SANLEIHGKPIEVKKAQPR 160
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
Query: 187 IFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNP 246
+F+GGL+ E D+ ++ +F+QFG ++E + D + + + F F+TF+ V +++
Sbjct: 1 MFIGGLNWETTDQSLRDYFSQFGEVVECTVMRDGATGRSRGFGFLTFKDPKTV-NIVMVK 59
Query: 247 KQKINDKEVDVKKATPKPE 265
+ ++ K +D K+A P+ E
Sbjct: 60 EHYLDGKIIDPKRAIPRDE 78
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 34/51 (66%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYF 658
+ L+++FS++GE+ T+ D TGRSRGF F+ FKD +++ V++ Y
Sbjct: 13 QSLRDYFSQFGEVVECTVMRDGATGRSRGFGFLTFKDPKTVNIVMVKEHYL 63
Score = 42.7 bits (99), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 601 GIVDKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLE 649
G+ + T+ E +E+F+++G + + TL D +TGR RGF F+ F+ +E
Sbjct: 89 GVSQETTDHEFREYFAQFGRVVDATLMMDKDTGRPRGFGFVTFESEAGVE 138
>gi|168041315|ref|XP_001773137.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675496|gb|EDQ61990.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 199
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 58/158 (36%), Positives = 91/158 (57%), Gaps = 22/158 (13%)
Query: 113 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINN 172
T+ L+ HF KYGEI + + D +TG RGF F+ F D +V D + HVI+
Sbjct: 14 TDNLQSHFKKYGEIIDAVIMKDRSTGHPRGFGFVTFAD------PAVCDNVVLDKHVIDG 67
Query: 173 KKIEAKKA----------KAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSK 222
+ +EAKK+ K+ KIFVGG+ P + DEE K++FA FG+++E ++ D S
Sbjct: 68 RTVEAKKSVPRENMAASKGPKTKKIFVGGIPPSITDEEFKSYFASFGSVVEHQIMQDHST 127
Query: 223 SQRKNFCFITFEHESVVIDLLKNPK------QKINDKE 254
+ + F F+TF+ E VV D+L + K +++ND++
Sbjct: 128 GRSRGFGFVTFDSEQVVEDILAHGKMHELGGKQVNDRD 165
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GKIF+GGLS + + +++HF ++G II+ + D+S + F F+TF +V +++
Sbjct: 1 GKIFIGGLSWDTSTDNLQSHFKKYGEIIDAVIMKDRSTGHPRGFGFVTFADPAVCDNVVL 60
Query: 245 NPKQKINDKEVDVKKATPKPEPFGVRG 271
+ K I+ + V+ KK+ P+ +G
Sbjct: 61 D-KHVIDGRTVEAKKSVPRENMAASKG 86
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 25/41 (60%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKD 644
D T+ L+ HF KYGEI + + D +TG RGF F+ F D
Sbjct: 11 DTSTDNLQSHFKKYGEIIDAVIMKDRSTGHPRGFGFVTFAD 51
Score = 40.4 bits (93), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 6/65 (9%)
Query: 593 KNKMVSHPGIVDKIT-EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
K K + GI IT EE K +F+ +G + + D +TGRSRGF F+ F D+E +
Sbjct: 88 KTKKIFVGGIPPSITDEEFKSYFASFGSVVEHQIMQDHSTGRSRGFGFVTF-DSEQV--- 143
Query: 652 SVEDV 656
VED+
Sbjct: 144 -VEDI 147
>gi|356552729|ref|XP_003544715.1| PREDICTED: uncharacterized protein LOC100788515 [Glycine max]
Length = 478
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 58/171 (33%), Positives = 89/171 (52%), Gaps = 27/171 (15%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
E LKE+F KYGE+ + D TGR+RGF F+VF D + E+ ++ H+I+ +
Sbjct: 20 ERLKEYFGKYGEVIEAVIMRDRTTGRARGFGFVVFADPSAAERVIMD------KHIIDGR 73
Query: 174 KIEAKKA---------------------KAKSGKIFVGGLSPEMKDEEIKAHFAQFGNII 212
+EAKKA ++ KIFVGGL + + + K +F QFG I
Sbjct: 74 TVEAKKAVPRDDQQTINRQSGSIHGSPSPGRTKKIFVGGLPSTITESDFKKYFDQFGTIA 133
Query: 213 ETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ + YD + + + F FIT++ E V +L ++N K V+VK+A PK
Sbjct: 134 DVVVMYDHNTQRPRGFGFITYDSEEAVDRVLYKTFHELNGKMVEVKRAVPK 184
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GK+F+GG+S + DE +K +F ++G +IE + D++ + + F F+ F S ++
Sbjct: 6 GKLFIGGISWDTDDERLKEYFGKYGEVIEAVIMRDRTTGRARGFGFVVFADPSAAERVIM 65
Query: 245 NPKQKINDKEVDVKKATPK 263
+ K I+ + V+ KKA P+
Sbjct: 66 D-KHIIDGRTVEAKKAVPR 83
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 29/47 (61%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D E LKE+F KYGE+ + D TGR+RGF F+VF D + E+
Sbjct: 16 DTDDERLKEYFGKYGEVIEAVIMRDRTTGRARGFGFVVFADPSAAER 62
>gi|356501604|ref|XP_003519614.1| PREDICTED: uncharacterized protein LOC100814628 [Glycine max]
Length = 477
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 58/171 (33%), Positives = 89/171 (52%), Gaps = 27/171 (15%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
E LKE+F KYGE+ + D TGR+RGF F+VF D + E+ ++ H+I+ +
Sbjct: 20 ERLKEYFGKYGEVIEAVIMRDRTTGRARGFGFVVFADPSAAERVIMD------KHIIDGR 73
Query: 174 KIEAKKA---------------------KAKSGKIFVGGLSPEMKDEEIKAHFAQFGNII 212
+EAKKA ++ KIFVGGL + + + K +F QFG I
Sbjct: 74 TVEAKKAVPRDDQQTINRQTGSIHGSPSPGRTKKIFVGGLPSTITESDFKKYFDQFGTIT 133
Query: 213 ETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ + YD + + + F FIT++ E V +L ++N K V+VK+A PK
Sbjct: 134 DVVVMYDHNTQRPRGFGFITYDSEEAVDRVLYKTFHELNGKMVEVKRAVPK 184
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GK+F+GG+S + DE +K +F ++G +IE + D++ + + F F+ F S ++
Sbjct: 6 GKLFIGGISWDTDDERLKEYFGKYGEVIEAVIMRDRTTGRARGFGFVVFADPSAAERVIM 65
Query: 245 NPKQKINDKEVDVKKATPK 263
+ K I+ + V+ KKA P+
Sbjct: 66 D-KHIIDGRTVEAKKAVPR 83
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 29/47 (61%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D E LKE+F KYGE+ + D TGR+RGF F+VF D + E+
Sbjct: 16 DTDDERLKEYFGKYGEVIEAVIMRDRTTGRARGFGFVVFADPSAAER 62
>gi|401885117|gb|EJT49245.1| hypothetical protein A1Q1_01645 [Trichosporon asahii var. asahii
CBS 2479]
Length = 333
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 98/153 (64%), Gaps = 8/153 (5%)
Query: 112 ITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVIN 171
+T+ L+ +FS++G+I+N T+ DP TGRSRGFAF+ FK +SVE V+A+ +H ++
Sbjct: 1 MTDGLRSYFSQFGDIDNCTIMRDP-TGRSRGFAFLTFKSV-----SSVEAVLAK-DHQLD 53
Query: 172 NKKIEAKKAK-AKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCF 230
K +A+ ++ K+FVGGL+P + + +K +Q+G +++ + +D+ + K F F
Sbjct: 54 GKMRAIPRAEHERTAKVFVGGLAPSVTSDSLKQFLSQYGKVMDATVMFDRLNGRSKGFAF 113
Query: 231 ITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
TF ES V + +++ ++ +++++KKA P+
Sbjct: 114 ATFADESGVENAMQHSGVELEGRQIEIKKAQPR 146
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 36/50 (72%), Gaps = 1/50 (2%)
Query: 606 ITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVED 655
+T+ L+ +FS++G+I+N T+ DP TGRSRGFAF+ FK S+E +D
Sbjct: 1 MTDGLRSYFSQFGDIDNCTIMRDP-TGRSRGFAFLTFKSVSSVEAVLAKD 49
Score = 42.7 bits (99), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
G+ +T + LK+ S+YG++ + T+ D GRS+GFAF F D +E A
Sbjct: 74 GLAPSVTSDSLKQFLSQYGKVMDATVMFDRLNGRSKGFAFATFADESGVENA 125
>gi|393235474|gb|EJD43029.1| RNA-binding domain-containing protein [Auricularia delicata
TFB-10046 SS5]
Length = 351
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 92/150 (61%), Gaps = 2/150 (1%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
E L+ +FS++G+++ T+ D TGRSRGFAF+ F+D ++ V + +G +I+ K
Sbjct: 13 EGLRNYFSQFGKVDACTIMRD-QTGRSRGFAFLTFEDPAAVNAVMVREHYLDGK-IIDPK 70
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
+ ++ ++ K+FVGGL+P + E ++A+FAQFG +++ + D+ S+ K F F+TF
Sbjct: 71 RAIPRQEHHRTQKLFVGGLAPTVTTESLRAYFAQFGKVVDATVMVDRDSSRSKGFGFVTF 130
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKATPK 263
E + LL +I+ K +DVK A P+
Sbjct: 131 EDIDNIERLLGLGHLEIDGKMIDVKLAQPR 160
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 52/93 (55%), Gaps = 12/93 (12%)
Query: 113 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINN 172
TE L+ +F+++G++ + T+ D ++ RS+GF F+ F+D +++E+ ++ G+ I+
Sbjct: 95 TESLRAYFAQFGKVVDATVMVDRDSSRSKGFGFVTFEDIDNIER-----LLGLGHLEIDG 149
Query: 173 KKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHF 205
K I+ K A+ + + +D + HF
Sbjct: 150 KMIDVKLAQPRGAMM-------AQRDSGPREHF 175
Score = 47.4 bits (111), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 187 IFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNP 246
+FVGGL+ + DE ++ +F+QFG + + D++ R F F+TFE + V ++
Sbjct: 1 MFVGGLNWDTSDEGLRNYFSQFGKVDACTIMRDQTGRSR-GFAFLTFEDPAAVNAVMVR- 58
Query: 247 KQKINDKEVDVKKATPKPE 265
+ ++ K +D K+A P+ E
Sbjct: 59 EHYLDGKIIDPKRAIPRQE 77
Score = 47.4 bits (111), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYF 658
D E L+ +FS++G+++ T+ D TGRSRGFAF+ F+D ++ V + Y
Sbjct: 9 DTSDEGLRNYFSQFGKVDACTIMRD-QTGRSRGFAFLTFEDPAAVNAVMVREHYL 62
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 33/44 (75%)
Query: 607 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
TE L+ +F+++G++ + T+ D ++ RS+GF F+ F+D +++E+
Sbjct: 95 TESLRAYFAQFGKVVDATVMVDRDSSRSKGFGFVTFEDIDNIER 138
>gi|89257430|gb|ABD64922.1| RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) containing
protein [Brassica oleracea]
Length = 426
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 65/179 (36%), Positives = 93/179 (51%), Gaps = 28/179 (15%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
GI + TE+ L+E+F +GE+ + D TGR+RGF F+VF D +V + +
Sbjct: 11 GISWETTEDRLREYFQSFGEVLEAVIMKDRATGRARGFGFLVFADP------TVAERVVL 64
Query: 166 GNHVINNKKIEAKKA---------------------KAKSGKIFVGGLSPEMKDEEIKAH 204
HVI+ K +EAKKA A S KIFVGGL+ + + E K +
Sbjct: 65 IRHVIDGKIVEAKKAVPRDDHVVLNRSSSSLQGSPGPATSKKIFVGGLASSVTEAEFKKY 124
Query: 205 FAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
FAQFG I + + YD + + F FI+FE E V +L+ ++N K V+VK A PK
Sbjct: 125 FAQFGTITDVVVMYDHRTQRPRGFGFISFESEEAVDRVLQRTFHELNGKMVEVKLAVPK 183
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Query: 184 SGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLL 243
S K+F+GG+S E ++ ++ +F FG ++E + D++ + + F F+ F + V + +
Sbjct: 4 SCKLFIGGISWETTEDRLREYFQSFGEVLEAVIMKDRATGRARGFGFLVFA-DPTVAERV 62
Query: 244 KNPKQKINDKEVDVKKATPK 263
+ I+ K V+ KKA P+
Sbjct: 63 VLIRHVIDGKIVEAKKAVPR 82
Score = 43.9 bits (102), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
GI + TE+ L+E+F +GE+ + D TGR+RGF F+VF D E+
Sbjct: 11 GISWETTEDRLREYFQSFGEVLEAVIMKDRATGRARGFGFLVFADPTVAER 61
>gi|357521485|ref|XP_003631031.1| Heterogeneous nuclear ribonucleoprotein A1 [Medicago truncatula]
gi|355525053|gb|AET05507.1| Heterogeneous nuclear ribonucleoprotein A1 [Medicago truncatula]
Length = 476
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 92/173 (53%), Gaps = 27/173 (15%)
Query: 112 ITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVIN 171
+ + L+E+FS YGE++ + D TGR+RGF F+VF D +V D++ + H I+
Sbjct: 1 MKDGLREYFSTYGEVKEAVIMKDRTTGRARGFGFVVFID------PAVADIVVQEKHNID 54
Query: 172 NKKIEAKKA---------------------KAKSGKIFVGGLSPEMKDEEIKAHFAQFGN 210
+ +EAKKA ++ KIFVGGL+ + + + K +F QFG
Sbjct: 55 GRMVEAKKAVPRDDQNVLSRTSGSIHGSPGPGRTRKIFVGGLASTVTESDFKKYFDQFGT 114
Query: 211 IIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
I + + YD + + + F FIT++ E V +L ++N K V+VK+A PK
Sbjct: 115 ITDVVVMYDHNTQRPRGFGFITYDSEEAVDQVLLKTFHELNGKMVEVKRAVPK 167
Score = 45.4 bits (106), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 27/39 (69%)
Query: 606 ITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKD 644
+ + L+E+FS YGE++ + D TGR+RGF F+VF D
Sbjct: 1 MKDGLREYFSTYGEVKEAVIMKDRTTGRARGFGFVVFID 39
>gi|242765445|ref|XP_002340976.1| heterogeneous nuclear ribonucleoprotein HRP1 [Talaromyces
stipitatus ATCC 10500]
gi|218724172|gb|EED23589.1| heterogeneous nuclear ribonucleoprotein HRP1 [Talaromyces
stipitatus ATCC 10500]
Length = 544
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 91/150 (60%), Gaps = 2/150 (1%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+ LK++FS++GE+ T+ D TGRSRGF F+ F+D +++ V++ +G +I+ K
Sbjct: 126 QSLKDYFSQFGEVSECTVMRDSATGRSRGFGFLTFRDPKTVNTVMVKEHYLDGK-IIDPK 184
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
+ + + K+ KIFVGG+S E +++ K F QFG +++ + DK + + F F+TF
Sbjct: 185 RAIPRDEQEKTSKIFVGGVSQEATEQDFKQFFMQFGRVVDATLMIDKDTGRPRGFGFVTF 244
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ E+ V L P + I K ++VKKA P+
Sbjct: 245 DSEAAVEATLSRPLE-ILGKSIEVKKAQPR 273
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 63/114 (55%), Gaps = 3/114 (2%)
Query: 153 SLEKASVEDVIAEGNHVINNKKIEAKKAKAK-SGKIFVGGLSPEMKDEEIKAHFAQFGNI 211
S+++ S +DV +++ + EA+ K GK+F+GGL+ E D+ +K +F+QFG +
Sbjct: 80 SMDETS-QDVNVHTGDGVHSTEGEAQGTGIKEDGKMFIGGLNWETTDQSLKDYFSQFGEV 138
Query: 212 IETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE 265
E + D + + + F F+TF V ++ + ++ K +D K+A P+ E
Sbjct: 139 SECTVMRDSATGRSRGFGFLTFRDPKTVNTVMVK-EHYLDGKIIDPKRAIPRDE 191
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 34/51 (66%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYF 658
+ LK++FS++GE+ T+ D TGRSRGF F+ F+D +++ V++ Y
Sbjct: 126 QSLKDYFSQFGEVSECTVMRDSATGRSRGFGFLTFRDPKTVNTVMVKEHYL 176
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 35/54 (64%), Gaps = 2/54 (3%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASV 653
G+ + TE+ K+ F ++G + + TL D +TGR RGF F+ F D+E+ +A++
Sbjct: 202 GVSQEATEQDFKQFFMQFGRVVDATLMIDKDTGRPRGFGFVTF-DSEAAVEATL 254
>gi|508268|gb|AAA64653.1| A+U-rich RNA-binding protein, partial [Mus musculus]
Length = 177
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 54/122 (44%), Positives = 82/122 (67%), Gaps = 10/122 (8%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++LK++FSK+GE+ + TLK DP TGRSRGF F++FK++ES++K V+ + H +N K
Sbjct: 60 KDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDK-----VMDQKEHKLNGK 114
Query: 174 KIEAKKAKAKS-----GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNF 228
I+ K+AKA KIFVGGLSP+ +E+I+ +F FG + E+P D ++R+ F
Sbjct: 115 VIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGF 174
Query: 229 CF 230
C
Sbjct: 175 CI 176
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 39/48 (81%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
D ++LK++FSK+GE+ + TLK DP TGRSRGF F++FK++ES++K
Sbjct: 56 DTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKV 103
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 51/87 (58%)
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
KI+A K + GK+F+GGLS + +++K +F++FG +++ + D + + F F+ F
Sbjct: 35 KIDASKNEEDEGKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLF 94
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKA 260
+ V ++ + K+N K +D K+A
Sbjct: 95 KESESVDKVMDQKEHKLNGKVIDPKRA 121
>gi|302785051|ref|XP_002974297.1| hypothetical protein SELMODRAFT_101375 [Selaginella moellendorffii]
gi|302807955|ref|XP_002985671.1| hypothetical protein SELMODRAFT_122630 [Selaginella moellendorffii]
gi|300146580|gb|EFJ13249.1| hypothetical protein SELMODRAFT_122630 [Selaginella moellendorffii]
gi|300157895|gb|EFJ24519.1| hypothetical protein SELMODRAFT_101375 [Selaginella moellendorffii]
Length = 187
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 65/193 (33%), Positives = 99/193 (51%), Gaps = 31/193 (16%)
Query: 96 MEAKNKMVSHPGIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESL 154
ME+ + GI + TEE L+++F +YGEI + D NTGR+RGF F+ F D +
Sbjct: 1 MESDQGKLFIGGISWETTEEQLRDYFQRYGEIAETMIMKDRNTGRARGFGFVSFADPSAA 60
Query: 155 EKASVEDVIAEGNHVINNKKIEAKKA------------------------KAKSGKIFVG 190
+ A E H IN + +EAKKA + ++ KIFVG
Sbjct: 61 DMAVAE------KHTINGRLVEAKKAVPRDEQQTIPRSSISSGGQSPGGGQGRTKKIFVG 114
Query: 191 GLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKI 250
GL+ + +EE + +F QFG I + + YD + + + F FITF+ E V +L ++
Sbjct: 115 GLASTVTEEEFRGYFEQFGTISDAVVMYDHTTQRPRGFGFITFDSEDSVEAVLMKSFHEL 174
Query: 251 NDKEVDVKKATPK 263
DK V+VK+A P+
Sbjct: 175 KDKMVEVKRAVPR 187
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Query: 181 KAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVI 240
++ GK+F+GG+S E +E+++ +F ++G I ET + D++ + + F F++F S
Sbjct: 2 ESDQGKLFIGGISWETTEEQLRDYFQRYGEIAETMIMKDRNTGRARGFGFVSFADPSAA- 60
Query: 241 DLLKNPKQKINDKEVDVKKATPKPE 265
D+ K IN + V+ KKA P+ E
Sbjct: 61 DMAVAEKHTINGRLVEAKKAVPRDE 85
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 30/47 (63%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVE 654
E+L+++F +YGEI + D NTGR+RGF F+ F D + + A E
Sbjct: 20 EQLRDYFQRYGEIAETMIMKDRNTGRARGFGFVSFADPSAADMAVAE 66
>gi|303312249|ref|XP_003066136.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240105798|gb|EER23991.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|320040133|gb|EFW22067.1| heterogeneous nuclear ribonucleoprotein HRP1 [Coccidioides
posadasii str. Silveira]
Length = 495
Score = 105 bits (263), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 52/150 (34%), Positives = 92/150 (61%), Gaps = 2/150 (1%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+ LK++FS++GE++ T+ D TGRSRGF F+ FKD +++ V++ +G +I+ K
Sbjct: 13 QSLKDYFSQFGEVQECTVMRDGATGRSRGFGFLTFKDPKTVNTVMVKEHYLDG-KIIDPK 71
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
+ + + ++ KIFVGG+S + +++ K F QFG +++ + DK + + F F+TF
Sbjct: 72 RAIPRDEQERTSKIFVGGVSQDANEQDFKKFFMQFGRVVDATLMIDKDTGRPRGFGFVTF 131
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ E+ V L P + I K ++VKKA P+
Sbjct: 132 DSEAAVEACLSQPLE-ILGKPIEVKKAQPR 160
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 35/51 (68%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYF 658
+ LK++FS++GE++ T+ D TGRSRGF F+ FKD +++ V++ Y
Sbjct: 13 QSLKDYFSQFGEVQECTVMRDGATGRSRGFGFLTFKDPKTVNTVMVKEHYL 63
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 187 IFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNP 246
+F+GGL+ E D+ +K +F+QFG + E + D + + + F F+TF+ V ++
Sbjct: 1 MFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDGATGRSRGFGFLTFKDPKTVNTVMVK- 59
Query: 247 KQKINDKEVDVKKATPKPE 265
+ ++ K +D K+A P+ E
Sbjct: 60 EHYLDGKIIDPKRAIPRDE 78
Score = 40.0 bits (92), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 27/46 (58%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLE 649
D ++ K+ F ++G + + TL D +TGR RGF F+ F ++E
Sbjct: 93 DANEQDFKKFFMQFGRVVDATLMIDKDTGRPRGFGFVTFDSEAAVE 138
>gi|354495150|ref|XP_003509694.1| PREDICTED: hypothetical protein LOC100762069 [Cricetulus griseus]
gi|344255246|gb|EGW11350.1| Heterogeneous nuclear ribonucleoprotein D-like [Cricetulus griseus]
Length = 560
Score = 105 bits (263), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 56/158 (35%), Positives = 91/158 (57%), Gaps = 10/158 (6%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+ L ++ S +GE+ + +K DPNTG SRGF F++FKD+ ++EK V+ +H ++ K
Sbjct: 47 QALLKYLSHFGEVIDFIIKIDPNTGLSRGFGFVLFKDSSAVEK-----VLQVKDHKVDGK 101
Query: 174 KIEAKKAKAKSG-----KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNF 228
K+E ++AKA K+FVGGL+P + +E+I+A+F FG I +P + +R+ F
Sbjct: 102 KVEFRRAKAVESQFPIKKVFVGGLNPRVSEEKIRAYFGTFGQIEAVVLPLCSNTQRRRAF 161
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEP 266
FI + E+ +L+ I +VK A PK P
Sbjct: 162 GFIKYTEETPARKVLETRFHFIGSSRCEVKMALPKEYP 199
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 54/97 (55%)
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
+I+A K + + K+F+GGLSPE+ + + + + FG +I+ + D + + F F+ F
Sbjct: 22 RIDATKNEQDASKMFIGGLSPELNKQALLKYLSHFGEVIDFIIKIDPNTGLSRGFGFVLF 81
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGVR 270
+ S V +L+ K++ K+V+ ++A F ++
Sbjct: 82 KDSSAVEKVLQVKDHKVDGKKVEFRRAKAVESQFPIK 118
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 41/69 (59%), Gaps = 5/69 (7%)
Query: 587 FYIVEAKNKMVSHPGIVDKITEELKE-----HFSKYGEIENVTLKSDPNTGRSRGFAFIV 641
F I KN+ + + ++ EL + + S +GE+ + +K DPNTG SRGF F++
Sbjct: 21 FRIDATKNEQDASKMFIGGLSPELNKQALLKYLSHFGEVIDFIIKIDPNTGLSRGFGFVL 80
Query: 642 FKDTESLEK 650
FKD+ ++EK
Sbjct: 81 FKDSSAVEK 89
>gi|119193228|ref|XP_001247220.1| hypothetical protein CIMG_00991 [Coccidioides immitis RS]
Length = 506
Score = 105 bits (263), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 52/150 (34%), Positives = 92/150 (61%), Gaps = 2/150 (1%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+ LK++FS++GE++ T+ D TGRSRGF F+ FKD +++ V++ +G +I+ K
Sbjct: 24 QSLKDYFSQFGEVQECTVMRDGATGRSRGFGFLTFKDPKTVNTVMVKEHYLDG-KIIDPK 82
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
+ + + ++ KIFVGG+S + +++ K F QFG +++ + DK + + F F+TF
Sbjct: 83 RAIPRDEQERTSKIFVGGVSQDANEQDFKKFFMQFGRVVDATLMIDKDTGRPRGFGFVTF 142
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ E+ V L P + I K ++VKKA P+
Sbjct: 143 DSEAAVEACLSQPLE-ILGKPIEVKKAQPR 171
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 35/51 (68%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYF 658
+ LK++FS++GE++ T+ D TGRSRGF F+ FKD +++ V++ Y
Sbjct: 24 QSLKDYFSQFGEVQECTVMRDGATGRSRGFGFLTFKDPKTVNTVMVKEHYL 74
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+F+GGL+ E D+ +K +F+QFG + E + D + + + F F+TF+ V ++
Sbjct: 11 KMFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDGATGRSRGFGFLTFKDPKTVNTVMVK 70
Query: 246 PKQKINDKEVDVKKATPKPE 265
+ ++ K +D K+A P+ E
Sbjct: 71 -EHYLDGKIIDPKRAIPRDE 89
Score = 40.0 bits (92), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 27/46 (58%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLE 649
D ++ K+ F ++G + + TL D +TGR RGF F+ F ++E
Sbjct: 104 DANEQDFKKFFMQFGRVVDATLMIDKDTGRPRGFGFVTFDSEAAVE 149
>gi|413926094|gb|AFW66026.1| heterogeneous nuclear ribonucleoprotein A3 [Zea mays]
Length = 443
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 94/169 (55%), Gaps = 18/169 (10%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + TEE +HF KYG I + + D +T RGF F+ F D SV D + E
Sbjct: 120 GVAWETTEESFSKHFEKYGAITDSVIMKDKHTKMPRGFGFVTFSD------PSVIDKVLE 173
Query: 166 GNHVINNKKIEAK----------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETE 215
+HVI+ + +E K K K+ KIF+GGL P + ++E+K HF+ +GN++E +
Sbjct: 174 DDHVIDGRTVEVKRTVPREEMITKDGPKTRKIFIGGLPPSLTEDELKDHFSSYGNVVEHQ 233
Query: 216 MPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQK-INDKEVDVKKATPK 263
+ D S + + F FITFE E V ++ + + + K+V++KKA PK
Sbjct: 234 IMLDHSTGRSRGFGFITFESEDSVERVISEGRMRDLGGKQVEIKKAEPK 282
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GKIFVGG++ E +E HF ++G I ++ + DK + F F+TF SV+ +L+
Sbjct: 114 GKIFVGGVAWETTEESFSKHFEKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVIDKVLE 173
Query: 245 NPKQKINDKEVDVKKATPKPE 265
+ I+ + V+VK+ P+ E
Sbjct: 174 D-DHVIDGRTVEVKRTVPREE 193
Score = 47.8 bits (112), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Query: 601 GIVDKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVE 654
G+ +TE ELK+HFS YG + + D +TGRSRGF FI F+ +S+E+ E
Sbjct: 209 GLPPSLTEDELKDHFSSYGNVVEHQIMLDHSTGRSRGFGFITFESEDSVERVISE 263
Score = 38.9 bits (89), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVED 655
G+ + TEE +HF KYG I + + D +T RGF F+ F D ++K +D
Sbjct: 120 GVAWETTEESFSKHFEKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVIDKVLEDD 175
>gi|256081432|ref|XP_002576974.1| heterogeneous nuclear ribonucleoprotein [Schistosoma mansoni]
gi|350645373|emb|CCD59902.1| heterogeneous nuclear ribonucleoprotein,putative [Schistosoma
mansoni]
Length = 392
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 92/154 (59%), Gaps = 8/154 (5%)
Query: 113 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINN 172
+++LKE+FS++G++ +K D TG SRGF F+ + + + K V++ H + N
Sbjct: 76 SDDLKEYFSRWGKVTQCIIKLDRFTGNSRGFGFVTLESEDCVSK-----VLSVPEHWLKN 130
Query: 173 KKIEAKKAKAKS---GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFC 229
KKI+ KKAK KIFVGG+ PE+ +++I+ +F+ FG + ++PYD K +RK++
Sbjct: 131 KKIDPKKAKPSREPLKKIFVGGIDPEVTEDQIREYFSSFGKVESLDLPYDTQKGKRKHYI 190
Query: 230 FITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
F++F E+ + +Q I ++ DV+ A +
Sbjct: 191 FVSFSTEAAAKKAISKERQDIFGRQCDVRVAVTR 224
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 50/96 (52%), Gaps = 12/96 (12%)
Query: 184 SGKIFVGGLSPE------------MKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFI 231
S K+FVGGLS E + +++K +F+++G + + + D+ + F F+
Sbjct: 50 SRKLFVGGLSWETNESKVSCLLFTISSDDLKEYFSRWGKVTQCIIKLDRFTGNSRGFGFV 109
Query: 232 TFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPF 267
T E E V +L P+ + +K++D KKA P EP
Sbjct: 110 TLESEDCVSKVLSVPEHWLKNKKIDPKKAKPSREPL 145
Score = 40.4 bits (93), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 29/44 (65%)
Query: 607 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+++LKE+FS++G++ +K D TG SRGF F+ + + + K
Sbjct: 76 SDDLKEYFSRWGKVTQCIIKLDRFTGNSRGFGFVTLESEDCVSK 119
>gi|302307303|ref|NP_983936.2| ADL160Wp [Ashbya gossypii ATCC 10895]
gi|299788936|gb|AAS51760.2| ADL160Wp [Ashbya gossypii ATCC 10895]
gi|374107149|gb|AEY96057.1| FADL160Wp [Ashbya gossypii FDAG1]
Length = 526
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 98/163 (60%), Gaps = 12/163 (7%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + TE+ L+E+FSKYG + V + D TGRSRGF F+ F D S+ D + +
Sbjct: 169 GLNWETTEDNLREYFSKYGNVTEVKIMRDGTTGRSRGFGFLSFADASSV------DEVVK 222
Query: 166 GNHVINNKKIEAKKA-----KAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDK 220
H+++ K I+ K+A + K+GKIFVGG+ P+++ +E + F+Q+G+II+ ++ DK
Sbjct: 223 TQHILDGKVIDPKRAIPREEQDKTGKIFVGGIGPDVRPKEFEEFFSQWGSIIDAQLMLDK 282
Query: 221 SKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ + F FIT++ V + +N + K +++K+A P+
Sbjct: 283 DTGRSRGFGFITYDSPDAVDRVCQNKFIEFKGKRIEIKRAEPR 325
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 57/94 (60%), Gaps = 5/94 (5%)
Query: 176 EAKKAKAK----SGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFI 231
EAK+ KA K+F+GGL+ E ++ ++ +F+++GN+ E ++ D + + + F F+
Sbjct: 150 EAKQVKADLSRDINKMFIGGLNWETTEDNLREYFSKYGNVTEVKIMRDGTTGRSRGFGFL 209
Query: 232 TFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE 265
+F S V +++K + ++ K +D K+A P+ E
Sbjct: 210 SFADASSVDEVVKT-QHILDGKVIDPKRAIPREE 242
Score = 47.4 bits (111), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 29/43 (67%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+ L+E+FSKYG + V + D TGRSRGF F+ F D S+++
Sbjct: 177 DNLREYFSKYGNVTEVKIMRDGTTGRSRGFGFLSFADASSVDE 219
Score = 40.8 bits (94), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 29/43 (67%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+E +E FS++G I + L D +TGRSRGF FI + +++++
Sbjct: 261 KEFEEFFSQWGSIIDAQLMLDKDTGRSRGFGFITYDSPDAVDR 303
>gi|224061141|ref|XP_002300356.1| predicted protein [Populus trichocarpa]
gi|222847614|gb|EEE85161.1| predicted protein [Populus trichocarpa]
Length = 478
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 60/171 (35%), Positives = 90/171 (52%), Gaps = 27/171 (15%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
E LKE+FSKYGE+ + D TGR+RGF F+VF D E+ +E HV++ +
Sbjct: 20 ERLKEYFSKYGEVVEAVIMRDRVTGRARGFGFVVFADPIVAERVIME------KHVVDGR 73
Query: 174 KIEAKKA---------------------KAKSGKIFVGGLSPEMKDEEIKAHFAQFGNII 212
+EAKKA ++ KIFVGGL+ + + + K +F QFG I
Sbjct: 74 TVEAKKAVPRDDQHILSRNTSSIHGSPGPGRTKKIFVGGLASTVTENDFKKYFEQFGIIT 133
Query: 213 ETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ + YD + + + F FIT++ E V +L ++N K V+VK+A PK
Sbjct: 134 DVVVMYDHNTLRPRGFGFITYDSEEAVDRVLHKTFHELNGKMVEVKRAVPK 184
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GK+F+GG+S + +E +K +F+++G ++E + D+ + + F F+ F + +V + +
Sbjct: 6 GKLFIGGISWDTDEERLKEYFSKYGEVVEAVIMRDRVTGRARGFGFVVFA-DPIVAERVI 64
Query: 245 NPKQKINDKEVDVKKATPK 263
K ++ + V+ KKA P+
Sbjct: 65 MEKHVVDGRTVEAKKAVPR 83
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 31/51 (60%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVE 654
D E LKE+FSKYGE+ + D TGR+RGF F+VF D E+ +E
Sbjct: 16 DTDEERLKEYFSKYGEVVEAVIMRDRVTGRARGFGFVVFADPIVAERVIME 66
>gi|330939341|ref|XP_003305832.1| hypothetical protein PTT_18782 [Pyrenophora teres f. teres 0-1]
gi|311316974|gb|EFQ86065.1| hypothetical protein PTT_18782 [Pyrenophora teres f. teres 0-1]
Length = 562
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 60/171 (35%), Positives = 101/171 (59%), Gaps = 3/171 (1%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + TEE LK +FS++GE+ T+ D TGRSRGF F+ FKD + + V++ +
Sbjct: 111 GLNWETTEESLKNYFSQFGEVSECTVMRDSATGRSRGFGFLTFKDPKCVNIVMVKEHYLD 170
Query: 166 GNHVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQR 225
G +I+ K+ ++ + ++ KIFVGG+S E +E+ F QFG +++ + DK +
Sbjct: 171 G-KIIDPKRAIPREEQERTSKIFVGGVSQEATEEDFTNFFKQFGRVVDATLMMDKETGRP 229
Query: 226 KNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGVRGGRGGR 276
+ F F+TF+ ++ V L+ P Q I K+++VK+A P+ GG GG+
Sbjct: 230 RGFGFVTFDGDAAVDATLRAPLQ-ILGKQIEVKRAQPRGNMRDEEGGDGGK 279
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 51/84 (60%), Gaps = 3/84 (3%)
Query: 183 KSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVV-ID 241
+ GK+F+GGL+ E +E +K +F+QFG + E + D + + + F F+TF+ V I
Sbjct: 103 EDGKMFIGGLNWETTEESLKNYFSQFGEVSECTVMRDSATGRSRGFGFLTFKDPKCVNIV 162
Query: 242 LLKNPKQKINDKEVDVKKATPKPE 265
++K + ++ K +D K+A P+ E
Sbjct: 163 MVK--EHYLDGKIIDPKRAIPREE 184
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 32/51 (62%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYF 658
E LK +FS++GE+ T+ D TGRSRGF F+ FKD + + V++ Y
Sbjct: 119 ESLKNYFSQFGEVSECTVMRDSATGRSRGFGFLTFKDPKCVNIVMVKEHYL 169
>gi|258574483|ref|XP_002541423.1| hypothetical protein UREG_00938 [Uncinocarpus reesii 1704]
gi|237901689|gb|EEP76090.1| hypothetical protein UREG_00938 [Uncinocarpus reesii 1704]
Length = 341
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 52/150 (34%), Positives = 92/150 (61%), Gaps = 2/150 (1%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+ LK++FS++GE++ T+ D TGRSRGF F+ FKD +++ V++ +G +I+ K
Sbjct: 13 QSLKDYFSQFGEVQECTVMRDGATGRSRGFGFLTFKDAKTVNTVMVKEHYLDG-KIIDPK 71
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
+ + + ++ KIFVGG+S + +++ K F QFG +++ + DK + + F F+TF
Sbjct: 72 RAIPRDEQERTSKIFVGGVSQDATEQDFKKFFMQFGRVVDATLMIDKDTGRPRGFGFVTF 131
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ E+ V L P + I K ++VKKA P+
Sbjct: 132 DSEAAVEACLSQPLE-ILGKPIEVKKAQPR 160
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 35/51 (68%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYF 658
+ LK++FS++GE++ T+ D TGRSRGF F+ FKD +++ V++ Y
Sbjct: 13 QSLKDYFSQFGEVQECTVMRDGATGRSRGFGFLTFKDAKTVNTVMVKEHYL 63
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 187 IFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNP 246
+F+GGL+ E D+ +K +F+QFG + E + D + + + F F+TF+ V ++
Sbjct: 1 MFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDGATGRSRGFGFLTFKDAKTVNTVMVK- 59
Query: 247 KQKINDKEVDVKKATPKPE 265
+ ++ K +D K+A P+ E
Sbjct: 60 EHYLDGKIIDPKRAIPRDE 78
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 27/46 (58%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLE 649
D ++ K+ F ++G + + TL D +TGR RGF F+ F ++E
Sbjct: 93 DATEQDFKKFFMQFGRVVDATLMIDKDTGRPRGFGFVTFDSEAAVE 138
>gi|350421557|ref|XP_003492883.1| PREDICTED: RNA-binding protein Musashi homolog Rbp6-like, partial
[Bombus impatiens]
Length = 241
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 62/159 (38%), Positives = 92/159 (57%), Gaps = 13/159 (8%)
Query: 113 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINN 172
+E+L+E+F +G + +V + DP T RSRGF FI F E SV+ V+ H ++
Sbjct: 74 SEKLREYFGMFGTVTDVLIMKDPVTQRSRGFGFITF-----AEPGSVDKVLKCPIHTLDG 128
Query: 173 KKIEAKKAKAK--------SGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQ 224
KKI+ K A K + KIFVGG+S + +E+KA+F QFG + ET M D+ +
Sbjct: 129 KKIDPKHATPKNRAKQANRTKKIFVGGVSQDTSSDEVKAYFNQFGKVEETVMLMDQQTKR 188
Query: 225 RKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ F F+TFE+E VV + + I +K+V+ KKA PK
Sbjct: 189 HRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPK 227
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 45/79 (56%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GK+FVGGLS + E+++ +F FG + + + D + + F FITF V +LK
Sbjct: 61 GKLFVGGLSWQTSSEKLREYFGMFGTVTDVLIMKDPVTQRSRGFGFITFAEPGSVDKVLK 120
Query: 245 NPKQKINDKEVDVKKATPK 263
P ++ K++D K ATPK
Sbjct: 121 CPIHTLDGKKIDPKHATPK 139
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 30/44 (68%)
Query: 607 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+E+L+E+F +G + +V + DP T RSRGF FI F + S++K
Sbjct: 74 SEKLREYFGMFGTVTDVLIMKDPVTQRSRGFGFITFAEPGSVDK 117
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 38/57 (66%), Gaps = 2/57 (3%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFYS 660
D ++E+K +F+++G++E + D T R RGF F+ F++ + +++ V +++F++
Sbjct: 159 DTSSDEVKAYFNQFGKVEETVMLMDQQTKRHRGFGFVTFENEDVVDR--VCEIHFHT 213
>gi|296083709|emb|CBI23698.3| unnamed protein product [Vitis vinifera]
Length = 388
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 90/175 (51%), Gaps = 31/175 (17%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++LKE+F YGE+ + D TGR RGF F+VF D S+ D + + H+I+ +
Sbjct: 20 DKLKEYFGSYGEVSQAVVMRDKATGRPRGFGFVVFAD------PSILDRVLQEKHIIDGR 73
Query: 174 KIEAKKA-------------------------KAKSGKIFVGGLSPEMKDEEIKAHFAQF 208
+EAK+A K+ KIFVGGL P + +E + +F F
Sbjct: 74 TVEAKRALSREEQQTSSRAGNFNSARNSGGGGNVKTKKIFVGGLPPTLSEEGFRQYFEAF 133
Query: 209 GNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
G++ + + YD+S + + F F++F+ E V +L +N K+V+VK+A PK
Sbjct: 134 GHVTDVVVMYDQSTQRPRGFGFVSFDTEDAVDRVLYKTFHDLNGKQVEVKRALPK 188
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Query: 182 AKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVID 241
+ GK+F+GG+S E ++++K +F +G + + + DK+ + + F F+ F S ++D
Sbjct: 3 SDQGKLFIGGISWETSEDKLKEYFGSYGEVSQAVVMRDKATGRPRGFGFVVFADPS-ILD 61
Query: 242 LLKNPKQKINDKEVDVKKATPKPE 265
+ K I+ + V+ K+A + E
Sbjct: 62 RVLQEKHIIDGRTVEAKRALSREE 85
Score = 47.4 bits (111), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVE 654
++LKE+F YGE+ + D TGR RGF F+VF D L++ E
Sbjct: 20 DKLKEYFGSYGEVSQAVVMRDKATGRPRGFGFVVFADPSILDRVLQE 66
Score = 39.3 bits (90), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 31/53 (58%)
Query: 445 IIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 497
+ + + YD+S + + F F++F+ E V +L +N K+V+VK+A PK
Sbjct: 136 VTDVVVMYDQSTQRPRGFGFVSFDTEDAVDRVLYKTFHDLNGKQVEVKRALPK 188
>gi|171694297|ref|XP_001912073.1| hypothetical protein [Podospora anserina S mat+]
gi|170947097|emb|CAP73902.1| unnamed protein product [Podospora anserina S mat+]
Length = 513
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 55/150 (36%), Positives = 92/150 (61%), Gaps = 2/150 (1%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+ L+++FS +GE+ T+ D TGRSRGF F+ FKD +++ V++ +G +I+ K
Sbjct: 28 QSLRDYFSTFGEVVECTVMRDGATGRSRGFGFLTFKDPKTVNIVMVKEHYLDGK-IIDPK 86
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
+ + + K+ KIFVGG+S E D E + +FAQFG +++ + DK + + F F+TF
Sbjct: 87 RAIPRDEQEKTSKIFVGGVSQETTDHEFREYFAQFGRVVDATLMMDKDTGRPRGFGFVTF 146
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKATPK 263
E E+ V L + +I+ K ++VKKA P+
Sbjct: 147 ESEAGVEACL-SANLEIHGKPIEVKKAQPR 175
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+F+GGL+ E D+ ++ +F+ FG ++E + D + + + F F+TF+ + ++++
Sbjct: 15 KMFIGGLNWETTDQSLRDYFSTFGEVVECTVMRDGATGRSRGFGFLTFK-DPKTVNIVMV 73
Query: 246 PKQKINDKEVDVKKATPKPE 265
+ ++ K +D K+A P+ E
Sbjct: 74 KEHYLDGKIIDPKRAIPRDE 93
Score = 47.4 bits (111), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 33/51 (64%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYF 658
+ L+++FS +GE+ T+ D TGRSRGF F+ FKD +++ V++ Y
Sbjct: 28 QSLRDYFSTFGEVVECTVMRDGATGRSRGFGFLTFKDPKTVNIVMVKEHYL 78
Score = 43.1 bits (100), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 601 GIVDKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLE 649
G+ + T+ E +E+F+++G + + TL D +TGR RGF F+ F+ +E
Sbjct: 104 GVSQETTDHEFREYFAQFGRVVDATLMMDKDTGRPRGFGFVTFESEAGVE 153
>gi|444723183|gb|ELW63844.1| RNA-binding protein Musashi like protein 1 [Tupaia chinensis]
Length = 324
Score = 105 bits (262), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 94/163 (57%), Gaps = 14/163 (8%)
Query: 110 HKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHV 169
H + L+E+F ++G ++ + DP T RSRGF F+ F D +A V+ V+A+ H
Sbjct: 24 HSKRKGLREYFGQFGHVKECLVMRDPLTKRSRGFGFVTFMD-----QAGVDKVLAQSRHE 78
Query: 170 INNKKIEAK---------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDK 220
+++K I+ K K ++ KIFVGGLS +++K +F QFG + + + +DK
Sbjct: 79 LDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSVNTTVDDVKQYFEQFGKVDDAMLMFDK 138
Query: 221 SKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ ++ + F F+TFE E +V + + +IN+K V+ KKA PK
Sbjct: 139 TTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPK 181
Score = 52.4 bits (124), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 44/75 (58%), Gaps = 5/75 (6%)
Query: 109 VHKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNH 168
V+ +++K++F ++G++++ L D T R RGF F+ F+ + +EK V H
Sbjct: 112 VNTTVDDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEK-----VCEIHFH 166
Query: 169 VINNKKIEAKKAKAK 183
INNK +E KKA+ K
Sbjct: 167 EINNKMVECKKAQPK 181
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 37/57 (64%), Gaps = 2/57 (3%)
Query: 603 VDKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFY 659
V+ +++K++F ++G++++ L D T R RGF F+ F+ + +EK V +++F+
Sbjct: 112 VNTTVDDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEK--VCEIHFH 166
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 26/41 (63%)
Query: 610 LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
L+E+F ++G ++ + DP T RSRGF F+ F D ++K
Sbjct: 30 LREYFGQFGHVKECLVMRDPLTKRSRGFGFVTFMDQAGVDK 70
Score = 40.0 bits (92), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 34/54 (62%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 497
++ + + +DK+ ++ + F F+TFE E +V + + +IN+K V+ KKA PK
Sbjct: 128 KVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPK 181
>gi|378734179|gb|EHY60638.1| hypothetical protein HMPREF1120_08590 [Exophiala dermatitidis
NIH/UT8656]
Length = 455
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 93/150 (62%), Gaps = 1/150 (0%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+ L ++FS++GE++ T+ D TGRSRGF F+ FKD +++ V++ +G +I+ K
Sbjct: 13 QSLHDYFSQFGEVQECTVMRDSATGRSRGFGFLTFKDPKTVNTVMVKEHFLDG-KIIDPK 71
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
+ + + K+ KIFVGG+S + +E+ ++ FAQFG +I+ + DK + + F F+TF
Sbjct: 72 RAIPRDEQEKTAKIFVGGVSQDATEEDFESFFAQFGRVIDATLMMDKDTGRPRGFGFVTF 131
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ ++ V L+ +I K ++VK+A P+
Sbjct: 132 DSDAAVERCLEYHPLEILGKPIEVKRAQPR 161
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 34/51 (66%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYF 658
+ L ++FS++GE++ T+ D TGRSRGF F+ FKD +++ V++ +
Sbjct: 13 QSLHDYFSQFGEVQECTVMRDSATGRSRGFGFLTFKDPKTVNTVMVKEHFL 63
Score = 45.8 bits (107), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 187 IFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNP 246
+F+GGL+ E D+ + +F+QFG + E + D + + + F F+TF+ V ++
Sbjct: 1 MFIGGLNWETTDQSLHDYFSQFGEVQECTVMRDSATGRSRGFGFLTFKDPKTVNTVMVK- 59
Query: 247 KQKINDKEVDVKKATPKPE 265
+ ++ K +D K+A P+ E
Sbjct: 60 EHFLDGKIIDPKRAIPRDE 78
Score = 42.0 bits (97), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 28/47 (59%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D E+ + F+++G + + TL D +TGR RGF F+ F ++E+
Sbjct: 93 DATEEDFESFFAQFGRVIDATLMMDKDTGRPRGFGFVTFDSDAAVER 139
>gi|358388987|gb|EHK26580.1| hypothetical protein TRIVIDRAFT_77860 [Trichoderma virens Gv29-8]
Length = 525
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 95/159 (59%), Gaps = 10/159 (6%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEG------- 166
+ L+++FS++GE+ T+ D ++GRSRGF F+ FKD +++ V++ +G
Sbjct: 126 QSLRDYFSQFGEVVECTVMRDSSSGRSRGFGFLTFKDPKTVNIVMVKEHFLDGKIVSLLP 185
Query: 167 --NHVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQ 224
N I+ K+ + + K+ KIFVGG+S + D+E + +FAQFG +++ + DK +
Sbjct: 186 CHNPCIDPKRAIPRDEQEKTSKIFVGGVSQDTTDQEFREYFAQFGRVVDATLMMDKDTGR 245
Query: 225 RKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ F F+TFE E+ V D N +I+ K ++VKKA P+
Sbjct: 246 PRGFGFVTFESEAGV-DACINVPLEIHGKPIEVKKAQPR 283
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 179 KAKAK-SGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHES 237
KA AK GK+F+GGL+ E D+ ++ +F+QFG ++E + D S + + F F+TF+
Sbjct: 105 KASAKEDGKMFIGGLNWETTDQSLRDYFSQFGEVVECTVMRDSSSGRSRGFGFLTFKDPK 164
Query: 238 VV 239
V
Sbjct: 165 TV 166
Score = 46.2 bits (108), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 35/51 (68%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYF 658
+ L+++FS++GE+ T+ D ++GRSRGF F+ FKD +++ V++ +
Sbjct: 126 QSLRDYFSQFGEVVECTVMRDSSSGRSRGFGFLTFKDPKTVNIVMVKEHFL 176
Score = 43.9 bits (102), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 27/40 (67%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFK 643
D +E +E+F+++G + + TL D +TGR RGF F+ F+
Sbjct: 216 DTTDQEFREYFAQFGRVVDATLMMDKDTGRPRGFGFVTFE 255
>gi|406694599|gb|EKC97923.1| subunit of cleavage factor I, Hrp1p [Trichosporon asahii var.
asahii CBS 8904]
Length = 466
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 95/155 (61%), Gaps = 6/155 (3%)
Query: 109 VHKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNH 168
+ +T+ L+ +FS++G+I+N T+ DP TGRSRGFAF+ FK +SVE V+A+ +
Sbjct: 131 ITDMTDGLRSYFSQFGDIDNCTIMRDP-TGRSRGFAFLTFKSV-----SSVEAVLAKDHQ 184
Query: 169 VINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNF 228
+ + + ++ K+FVGGL+P + + +K +Q+G +++ + +D+ + K F
Sbjct: 185 LDGKMRAIPRAEHERTAKVFVGGLAPSVTSDSLKQFLSQYGKVMDATVMFDRLNGRSKGF 244
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
F TF ES V + +++ ++ +++++KKA P+
Sbjct: 245 AFATFADESGVENAMQHSGVELEGRQIEIKKAQPR 279
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 37/53 (69%), Gaps = 1/53 (1%)
Query: 603 VDKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVED 655
+ +T+ L+ +FS++G+I+N T+ DP TGRSRGFAF+ FK S+E +D
Sbjct: 131 ITDMTDGLRSYFSQFGDIDNCTIMRDP-TGRSRGFAFLTFKSVSSVEAVLAKD 182
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
G+ +T + LK+ S+YG++ + T+ D GRS+GFAF F D +E A
Sbjct: 207 GLAPSVTSDSLKQFLSQYGKVMDATVMFDRLNGRSKGFAFATFADESGVENA 258
>gi|147791134|emb|CAN68016.1| hypothetical protein VITISV_025150 [Vitis vinifera]
Length = 464
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 94/183 (51%), Gaps = 32/183 (17%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
GI + +E+ LKE+F YGE+ + D TGR RGF F+VF D S+ D + +
Sbjct: 12 GISWETSEDKLKEYFGSYGEVSQAVVMRDKATGRPRGFGFVVFADP------SILDRVLQ 65
Query: 166 GNHVINNKKIEAKKA-------------------------KAKSGKIFVGGLSPEMKDEE 200
H+I+ + +EAK+A K+ KIFVGGL P + +E
Sbjct: 66 EKHIIDGRTVEAKRALSREEQQTSSRAGNFNSARNSGGGGNVKTKKIFVGGLPPTLSEEG 125
Query: 201 IKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKA 260
+ +F FG++ + + YD+S + + F F++F+ E V +L +N K+V+VK+A
Sbjct: 126 FRQYFEAFGHVTDVVVMYDQSTQRPRGFGFVSFDTEDAVDRVLYKTFHDLNGKQVEVKRA 185
Query: 261 TPK 263
PK
Sbjct: 186 LPK 188
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GK+F+GG+S E ++++K +F +G + + + DK+ + + F F+ F S++ +L+
Sbjct: 6 GKLFIGGISWETSEDKLKEYFGSYGEVSQAVVMRDKATGRPRGFGFVVFADPSILDRVLQ 65
Query: 245 NPKQKINDKEVDVKKATPKPE 265
K I+ + V+ K+A + E
Sbjct: 66 E-KHIIDGRTVEAKRALSREE 85
Score = 47.4 bits (111), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 27/43 (62%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
++LKE+F YGE+ + D TGR RGF F+VF D L++
Sbjct: 20 DKLKEYFGSYGEVSQAVVMRDKATGRPRGFGFVVFADPSILDR 62
Score = 39.7 bits (91), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 28/46 (60%)
Query: 452 YDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 497
YD+S + + F F++F+ E V +L +N K+V+VK+A PK
Sbjct: 143 YDQSTQRPRGFGFVSFDTEDAVDRVLYKTFHDLNGKQVEVKRALPK 188
>gi|344301066|gb|EGW31378.1| hypothetical protein SPAPADRAFT_154438 [Spathaspora passalidarum
NRRL Y-27907]
Length = 507
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/158 (35%), Positives = 97/158 (61%), Gaps = 2/158 (1%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ TEE L+++FSKYG + + T+ D TGRSRGF F+ F+D +S+++ D I +
Sbjct: 178 GLNWDTTEEGLRDYFSKYGNVLDYTIMRDSATGRSRGFGFLTFEDPKSVDEVIKVDHILD 237
Query: 166 GNHVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQR 225
G +I+ K+ A++ + + GKIFVGG+ P + ++E FAQ+G+II+ ++ DK +
Sbjct: 238 GK-LIDPKRAIAREEQDRVGKIFVGGIDPLVTEKEFYDFFAQYGSIIDAQLMVDKDTGRS 296
Query: 226 KNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ F FIT++ V + N + + ++VK+A P+
Sbjct: 297 RGFGFITYDSPDAVDRVTVNKYLSLKGRAMEVKRAEPR 334
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
Query: 184 SGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLL 243
SGK+FVGGL+ + +E ++ +F+++GN+++ + D + + + F F+TFE V +++
Sbjct: 171 SGKMFVGGLNWDTTEEGLRDYFSKYGNVLDYTIMRDSATGRSRGFGFLTFEDPKSVDEVI 230
Query: 244 KNPKQKINDKEVDVKKATPKPE 265
K ++ K +D K+A + E
Sbjct: 231 KV-DHILDGKLIDPKRAIAREE 251
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 33/47 (70%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D E L+++FSKYG + + T+ D TGRSRGF F+ F+D +S+++
Sbjct: 182 DTTEEGLRDYFSKYGNVLDYTIMRDSATGRSRGFGFLTFEDPKSVDE 228
Score = 43.5 bits (101), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Query: 601 GIVDKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASV 653
GI +TE E + F++YG I + L D +TGRSRGF FI + +++++ +V
Sbjct: 262 GIDPLVTEKEFYDFFAQYGSIIDAQLMVDKDTGRSRGFGFITYDSPDAVDRVTV 315
>gi|115473043|ref|NP_001060120.1| Os07g0584500 [Oryza sativa Japonica Group]
gi|38175737|dbj|BAC55617.2| putative heterogeneous nuclear ribonucleoprotein A1 [Oryza sativa
Japonica Group]
gi|113611656|dbj|BAF22034.1| Os07g0584500 [Oryza sativa Japonica Group]
gi|215695373|dbj|BAG90564.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 472
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/190 (32%), Positives = 100/190 (52%), Gaps = 28/190 (14%)
Query: 96 MEAKNKMVSHPGIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESL 154
MEA + + GI + E+ L+E+FS++GE+ + D NTGR+RGF F+VF D
Sbjct: 1 MEADSGKLFVGGISWETDEDRLREYFSRFGEVTEAVIMRDRNTGRARGFGFVVFTDAGVA 60
Query: 155 EKASVEDVIAEGNHVINNKKIEAKKA---------------------KAKSGKIFVGGLS 193
E+ +++ H+I+ + +EAKKA ++ KIFVGGL+
Sbjct: 61 ERVTMDK------HMIDGRMVEAKKAVPRDDQSITSKNNGSSIGSPGPGRTRKIFVGGLA 114
Query: 194 PEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDK 253
+ + E + +F QFG I + + YD + + + F FIT++ E V L ++N K
Sbjct: 115 SNVTEVEFRRYFEQFGVITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALHKNFHELNGK 174
Query: 254 EVDVKKATPK 263
V+VK+A PK
Sbjct: 175 MVEVKRAVPK 184
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 32/47 (68%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVE 654
+ L+E+FS++GE+ + D NTGR+RGF F+VF D E+ +++
Sbjct: 20 DRLREYFSRFGEVTEAVIMRDRNTGRARGFGFVVFTDAGVAERVTMD 66
Score = 42.4 bits (98), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 601 GIVDKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
G+ +TE E + +F ++G I +V + D NT R RGF FI + ++++KA
Sbjct: 112 GLASNVTEVEFRRYFEQFGVITDVVVMYDHNTQRPRGFGFITYDSEDAVDKA 163
>gi|239051430|ref|NP_001131946.2| uncharacterized protein LOC100193339 [Zea mays]
gi|194695014|gb|ACF81591.1| unknown [Zea mays]
gi|223947685|gb|ACN27926.1| unknown [Zea mays]
gi|238908636|gb|ACF80580.2| unknown [Zea mays]
gi|413926096|gb|AFW66028.1| heterogeneous nuclear ribonucleoprotein A3 isoform 1 [Zea mays]
gi|413926097|gb|AFW66029.1| heterogeneous nuclear ribonucleoprotein A3 isoform 2 [Zea mays]
gi|413926098|gb|AFW66030.1| heterogeneous nuclear ribonucleoprotein A3 isoform 3 [Zea mays]
Length = 384
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 94/169 (55%), Gaps = 18/169 (10%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + TEE +HF KYG I + + D +T RGF F+ F D SV D + E
Sbjct: 61 GVAWETTEESFSKHFEKYGAITDSVIMKDKHTKMPRGFGFVTFSD------PSVIDKVLE 114
Query: 166 GNHVINNKKIEAK----------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETE 215
+HVI+ + +E K K K+ KIF+GGL P + ++E+K HF+ +GN++E +
Sbjct: 115 DDHVIDGRTVEVKRTVPREEMITKDGPKTRKIFIGGLPPSLTEDELKDHFSSYGNVVEHQ 174
Query: 216 MPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQK-INDKEVDVKKATPK 263
+ D S + + F FITFE E V ++ + + + K+V++KKA PK
Sbjct: 175 IMLDHSTGRSRGFGFITFESEDSVERVISEGRMRDLGGKQVEIKKAEPK 223
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GKIFVGG++ E +E HF ++G I ++ + DK + F F+TF SV+ +L+
Sbjct: 55 GKIFVGGVAWETTEESFSKHFEKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVIDKVLE 114
Query: 245 NPKQKINDKEVDVKKATPKPE 265
+ I+ + V+VK+ P+ E
Sbjct: 115 D-DHVIDGRTVEVKRTVPREE 134
Score = 47.4 bits (111), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Query: 601 GIVDKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVE 654
G+ +TE ELK+HFS YG + + D +TGRSRGF FI F+ +S+E+ E
Sbjct: 150 GLPPSLTEDELKDHFSSYGNVVEHQIMLDHSTGRSRGFGFITFESEDSVERVISE 204
Score = 38.9 bits (89), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVED 655
G+ + TEE +HF KYG I + + D +T RGF F+ F D ++K +D
Sbjct: 61 GVAWETTEESFSKHFEKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVIDKVLEDD 116
>gi|150866885|ref|XP_001386627.2| hypothetical protein PICST_68431 [Scheffersomyces stipitis CBS
6054]
gi|149388141|gb|ABN68598.2| nuclear polyadenylated RNA-binding protein 4 [Scheffersomyces
stipitis CBS 6054]
Length = 481
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/158 (37%), Positives = 97/158 (61%), Gaps = 2/158 (1%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ TEE L +FSK+GE+ + T+ D NTG+SRGF F+ F+D +S+++ D I +
Sbjct: 166 GLNWDTTEEGLVSYFSKFGEVVDYTIMKDNNTGKSRGFGFLTFRDPKSVDEVIKTDHILD 225
Query: 166 GNHVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQR 225
G +I+ K+ A++ + K GKIFVGG+ P + ++E F+QFG+II+ ++ DK +
Sbjct: 226 G-KLIDPKRAIAREEQDKVGKIFVGGIDPMVNEKEFHDFFSQFGSIIDAQLMIDKDSGRS 284
Query: 226 KNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ F FITF+ V + N + K ++VK+A P+
Sbjct: 285 RGFGFITFDSPDAVDRVTVNKFLTLKGKAMEVKRAEPR 322
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 33/47 (70%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D E L +FSK+GE+ + T+ D NTG+SRGF F+ F+D +S+++
Sbjct: 170 DTTEEGLVSYFSKFGEVVDYTIMKDNNTGKSRGFGFLTFRDPKSVDE 216
Score = 43.1 bits (100), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 50/83 (60%), Gaps = 1/83 (1%)
Query: 183 KSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDL 242
++GK+F+GGL+ + +E + ++F++FG +++ + D + + + F F+TF V ++
Sbjct: 158 ETGKMFIGGLNWDTTEEGLVSYFSKFGEVVDYTIMKDNNTGKSRGFGFLTFRDPKSVDEV 217
Query: 243 LKNPKQKINDKEVDVKKATPKPE 265
+K ++ K +D K+A + E
Sbjct: 218 IKT-DHILDGKLIDPKRAIAREE 239
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Query: 601 GIVDKITEELKEH--FSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASV 653
G +D + E + H FS++G I + L D ++GRSRGF FI F +++++ +V
Sbjct: 249 GGIDPMVNEKEFHDFFSQFGSIIDAQLMIDKDSGRSRGFGFITFDSPDAVDRVTV 303
>gi|255717440|ref|XP_002555001.1| KLTH0F18766p [Lachancea thermotolerans]
gi|238936384|emb|CAR24564.1| KLTH0F18766p [Lachancea thermotolerans CBS 6340]
Length = 588
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 102/163 (62%), Gaps = 12/163 (7%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + TE+ LK++FSKYG++ ++ + D TGRSRGF F+ F E +SV++V+ +
Sbjct: 214 GLNWETTEDNLKDYFSKYGQVTDLKIMRDNATGRSRGFGFLTF-----AEASSVDEVV-K 267
Query: 166 GNHVINNKKIEAKKA-----KAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDK 220
H+++ K I+ K+A + K+GKIFVGG+ P+++ +E + F+Q+G II+ ++ DK
Sbjct: 268 TQHILDGKVIDPKRAIPREEQDKTGKIFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDK 327
Query: 221 SKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ + F FIT++ V + +N + K +++K+A P+
Sbjct: 328 DTGRSRGFGFITYDTPDAVDRVCENKFIEFKGKRIEIKRAEPR 370
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 50/80 (62%), Gaps = 1/80 (1%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+F+GGL+ E ++ +K +F+++G + + ++ D + + + F F+TF S V +++K
Sbjct: 209 KMFIGGLNWETTEDNLKDYFSKYGQVTDLKIMRDNATGRSRGFGFLTFAEASSVDEVVKT 268
Query: 246 PKQKINDKEVDVKKATPKPE 265
+ ++ K +D K+A P+ E
Sbjct: 269 -QHILDGKVIDPKRAIPREE 287
Score = 46.2 bits (108), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 31/43 (72%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+ LK++FSKYG++ ++ + D TGRSRGF F+ F + S+++
Sbjct: 222 DNLKDYFSKYGQVTDLKIMRDNATGRSRGFGFLTFAEASSVDE 264
Score = 40.4 bits (93), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 29/43 (67%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+E +E FS++G I + L D +TGRSRGF FI + +++++
Sbjct: 306 KEFEEFFSQWGTIIDAQLMLDKDTGRSRGFGFITYDTPDAVDR 348
>gi|168000120|ref|XP_001752764.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695927|gb|EDQ82268.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 176
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/158 (36%), Positives = 91/158 (57%), Gaps = 22/158 (13%)
Query: 113 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINN 172
T+ L+ HF KYGEI + + D +TG RGF F+ F D + +K ++ HVI+
Sbjct: 14 TDNLQSHFKKYGEIIDAVIMKDRSTGHPRGFGFVTFADPDVCDKVVLD------KHVIDG 67
Query: 173 KKIEAKKA----------KAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSK 222
+ +EAKK+ K+ KIFVGG+ P + DEE K++FA FG+++E ++ D S
Sbjct: 68 RTVEAKKSVPRENLATSKGPKTKKIFVGGIPPSITDEEFKSYFAGFGSVMEHQIMQDHST 127
Query: 223 SQRKNFCFITFEHESVVIDLLKNPK------QKINDKE 254
+ + F F+TF+ E VV D+L + K +++ND E
Sbjct: 128 GRSRGFGFVTFDSEQVVEDILAHGKLHELAGKQVNDWE 165
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GKIF+GGLS + + +++HF ++G II+ + D+S + F F+TF + V D +
Sbjct: 1 GKIFIGGLSWDTSTDNLQSHFKKYGEIIDAVIMKDRSTGHPRGFGFVTFA-DPDVCDKVV 59
Query: 245 NPKQKINDKEVDVKKATPK 263
K I+ + V+ KK+ P+
Sbjct: 60 LDKHVIDGRTVEAKKSVPR 78
Score = 46.6 bits (109), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 30/51 (58%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVE 654
D T+ L+ HF KYGEI + + D +TG RGF F+ F D + +K ++
Sbjct: 11 DTSTDNLQSHFKKYGEIIDAVIMKDRSTGHPRGFGFVTFADPDVCDKVVLD 61
Score = 40.0 bits (92), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 6/65 (9%)
Query: 593 KNKMVSHPGIVDKIT-EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
K K + GI IT EE K +F+ +G + + D +TGRSRGF F+ F D+E +
Sbjct: 88 KTKKIFVGGIPPSITDEEFKSYFAGFGSVMEHQIMQDHSTGRSRGFGFVTF-DSEQV--- 143
Query: 652 SVEDV 656
VED+
Sbjct: 144 -VEDI 147
>gi|414590674|tpg|DAA41245.1| TPA: hypothetical protein ZEAMMB73_495774 [Zea mays]
Length = 470
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 101/191 (52%), Gaps = 27/191 (14%)
Query: 96 MEAKNKMVSHPGIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESL 154
MEA + + GI + E+ L+E+F ++G++ + D NTGR+RGF F+VF D+
Sbjct: 1 MEADSGKLFVGGISWETDEDRLREYFGRFGDVTEAVIMRDRNTGRARGFGFVVFADSGIA 60
Query: 155 EKASVEDVIAEGNHVINNKKIEAKKA--------------------KAKSGKIFVGGLSP 194
E+ ++E H+I+ + +EAKKA ++ KIFVGGL+
Sbjct: 61 ERVTMEK------HMIDGRMVEAKKAVPRDDQSIASKNNSSIGSPGPGRTRKIFVGGLAS 114
Query: 195 EMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKE 254
+ + E + +F QFG I + + YD + + + F FIT++ E V L ++N K
Sbjct: 115 NVTEVEFRRYFEQFGVITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALHKNFHELNGKM 174
Query: 255 VDVKKATPKPE 265
V+VK+A PK +
Sbjct: 175 VEVKRAVPKEQ 185
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 32/47 (68%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVE 654
+ L+E+F ++G++ + D NTGR+RGF F+VF D+ E+ ++E
Sbjct: 20 DRLREYFGRFGDVTEAVIMRDRNTGRARGFGFVVFADSGIAERVTME 66
Score = 42.4 bits (98), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 601 GIVDKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
G+ +TE E + +F ++G I +V + D NT R RGF FI + ++++KA
Sbjct: 111 GLASNVTEVEFRRYFEQFGVITDVVVMYDHNTQRPRGFGFITYDSEDAVDKA 162
>gi|255574941|ref|XP_002528377.1| Heterogeneous nuclear ribonucleoprotein 27C, putative [Ricinus
communis]
gi|223532245|gb|EEF34049.1| Heterogeneous nuclear ribonucleoprotein 27C, putative [Ricinus
communis]
Length = 470
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 97/183 (53%), Gaps = 32/183 (17%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
GI + TE+ LK++F +YG++ + D TGR RGF F+VF D L++ + +
Sbjct: 12 GISWETTEDKLKDYFVQYGDVVQTVVMRDKTTGRPRGFGFVVFADPNILDR------VLQ 65
Query: 166 GNHVINNKKIEAKKA--------KAKSG-----------------KIFVGGLSPEMKDEE 200
H I+ + +EAKKA A+SG KIFVGGL P + D+E
Sbjct: 66 DKHTIDGRTVEAKKALSREEQQTNARSGNLNPPRNSGSGGNIRTKKIFVGGLPPALTDDE 125
Query: 201 IKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKA 260
+ +F +G + + + YD++ + + F FI+F++E V +L +N K+V+VK+A
Sbjct: 126 FRQYFEAYGLVTDVVIMYDQNTQRPRGFGFISFDNEDAVDRVLHKTFHDLNGKQVEVKRA 185
Query: 261 TPK 263
PK
Sbjct: 186 LPK 188
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 53/81 (65%), Gaps = 1/81 (1%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GK+F+GG+S E ++++K +F Q+G++++T + DK+ + + F F+ F +++ +L+
Sbjct: 6 GKLFIGGISWETTEDKLKDYFVQYGDVVQTVVMRDKTTGRPRGFGFVVFADPNILDRVLQ 65
Query: 245 NPKQKINDKEVDVKKATPKPE 265
+ K I+ + V+ KKA + E
Sbjct: 66 D-KHTIDGRTVEAKKALSREE 85
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
GI + TE+ LK++F +YG++ + D TGR RGF F+VF D L++
Sbjct: 12 GISWETTEDKLKDYFVQYGDVVQTVVMRDKTTGRPRGFGFVVFADPNILDR 62
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 31/51 (60%), Gaps = 3/51 (5%)
Query: 600 PGIVDKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
P + D +E +++F YG + +V + D NT R RGF FI F + +++++
Sbjct: 119 PALTD---DEFRQYFEAYGLVTDVVIMYDQNTQRPRGFGFISFDNEDAVDR 166
Score = 40.0 bits (92), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 32/53 (60%)
Query: 445 IIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 497
+ + + YD++ + + F FI+F++E V +L +N K+V+VK+A PK
Sbjct: 136 VTDVVIMYDQNTQRPRGFGFISFDNEDAVDRVLHKTFHDLNGKQVEVKRALPK 188
>gi|356576454|ref|XP_003556346.1| PREDICTED: RNA-binding protein Musashi homolog 2-like [Glycine max]
Length = 476
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 100/193 (51%), Gaps = 34/193 (17%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
GI TE+ LKEHF YG++ + ++ + NTG+ RGF F+VF D L++ + E
Sbjct: 12 GISWDTTEDKLKEHFGNYGDVLSTSVMREKNTGKPRGFGFVVFADPNILDR------VLE 65
Query: 166 GNHVINNKKIEAKKA---------------KAKSG------------KIFVGGLSPEMKD 198
HVI+ + ++AKKA + SG KIFVGGL P + +
Sbjct: 66 DKHVIDGRTVDAKKAFSREDQQISVTSRGGNSNSGMNSENGGNIRTKKIFVGGLPPTLTE 125
Query: 199 EEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVK 258
E+ + +F +G++ + + YD++ + + F FI+F+ E V +L +N K+V+VK
Sbjct: 126 EKFRLYFESYGHVTDVVVMYDQNTGRPRGFGFISFDTEEAVDRVLHKSFHDLNGKQVEVK 185
Query: 259 KATPKPEPFGVRG 271
+A PK G G
Sbjct: 186 RALPKDANPGASG 198
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GK+F+GG+S + ++++K HF +G+++ T + +K+ + + F F+ F +++ +L+
Sbjct: 6 GKLFIGGISWDTTEDKLKEHFGNYGDVLSTSVMREKNTGKPRGFGFVVFADPNILDRVLE 65
Query: 245 NPKQKINDKEVDVKKA 260
+ K I+ + VD KKA
Sbjct: 66 D-KHVIDGRTVDAKKA 80
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D ++LKEHF YG++ + ++ + NTG+ RGF F+VF D L++
Sbjct: 16 DTTEDKLKEHFGNYGDVLSTSVMREKNTGKPRGFGFVVFADPNILDR 62
Score = 43.5 bits (101), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
G+ +TEE + +F YG + +V + D NTGR RGF FI F E++++
Sbjct: 118 GLPPTLTEEKFRLYFESYGHVTDVVVMYDQNTGRPRGFGFISFDTEEAVDR 168
Score = 40.0 bits (92), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 33/61 (54%)
Query: 445 IIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGVR 504
+ + + YD++ + + F FI+F+ E V +L +N K+V+VK+A PK G
Sbjct: 138 VTDVVVMYDQNTGRPRGFGFISFDTEEAVDRVLHKSFHDLNGKQVEVKRALPKDANPGAS 197
Query: 505 G 505
G
Sbjct: 198 G 198
>gi|431892736|gb|ELK03169.1| Heterogeneous nuclear ribonucleoprotein A/B [Pteropus alecto]
Length = 230
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/134 (43%), Positives = 83/134 (61%), Gaps = 9/134 (6%)
Query: 134 DPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNKKIEAKKAKAKSG----KIFV 189
DPNTGRSRGF FI+FKD+ ASVE V+ + H ++ + I+ KKA A KIFV
Sbjct: 2 DPNTGRSRGFGFILFKDS-----ASVEKVLDQKEHRLDGRVIDPKKAMAMKKDPVKKIFV 56
Query: 190 GGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQK 249
GGL+PE +E+I+ +F +FG I E+P D ++R+ F FITF+ E V +L+
Sbjct: 57 GGLNPEATEEKIREYFGEFGEIEAIELPVDPKSNKRRGFVFITFKEEEPVKKVLEKKFHT 116
Query: 250 INDKEVDVKKATPK 263
I+ + ++K A PK
Sbjct: 117 ISGSKCEIKVAQPK 130
Score = 52.4 bits (124), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 43/70 (61%), Gaps = 5/70 (7%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
E+++E+F ++GEIE + L DP + + RGF FI FK+ E ++K V+ + H I+
Sbjct: 66 EKIREYFGEFGEIEAIELPVDPKSNKRRGFVFITFKEEEPVKK-----VLEKKFHTISGS 120
Query: 174 KIEAKKAKAK 183
K E K A+ K
Sbjct: 121 KCEIKVAQPK 130
Score = 47.4 bits (111), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
G+ + TEE ++E+F ++GEIE + L DP + + RGF FI FK+ E ++K
Sbjct: 58 GLNPEATEEKIREYFGEFGEIEAIELPVDPKSNKRRGFVFITFKEEEPVKKV 109
Score = 43.5 bits (101), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 18/24 (75%), Positives = 21/24 (87%)
Query: 628 DPNTGRSRGFAFIVFKDTESLEKA 651
DPNTGRSRGF FI+FKD+ S+EK
Sbjct: 2 DPNTGRSRGFGFILFKDSASVEKV 25
>gi|327303046|ref|XP_003236215.1| heterogeneous nuclear ribonucleoprotein HRP1 [Trichophyton rubrum
CBS 118892]
gi|326461557|gb|EGD87010.1| heterogeneous nuclear ribonucleoprotein HRP1 [Trichophyton rubrum
CBS 118892]
Length = 489
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 91/150 (60%), Gaps = 2/150 (1%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+ LKE+FS++GE+ T+ D +GRSRGF F+ F D +++ V++ +G +I+ K
Sbjct: 13 QSLKEYFSQFGEVHECTVMRDGASGRSRGFGFLTFTDPKTVNTVMVKEHYLDG-KIIDPK 71
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
+ + + ++ KIFVGG+S E ++E K F QFG +++ + DK + + F F+TF
Sbjct: 72 RAIPRDEQERTSKIFVGGVSQEATEQEFKQFFMQFGRVVDATLMIDKDTGRPRGFGFVTF 131
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ E+ V L P + I+ K ++VKKA P+
Sbjct: 132 DSEAAVEATLSVPLE-IHGKAIEVKKAQPR 160
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 33/51 (64%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYF 658
+ LKE+FS++GE+ T+ D +GRSRGF F+ F D +++ V++ Y
Sbjct: 13 QSLKEYFSQFGEVHECTVMRDGASGRSRGFGFLTFTDPKTVNTVMVKEHYL 63
Score = 47.4 bits (111), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 187 IFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNP 246
+F+GGL+ E D+ +K +F+QFG + E + D + + + F F+TF V ++
Sbjct: 1 MFIGGLNWETTDQSLKEYFSQFGEVHECTVMRDGASGRSRGFGFLTFTDPKTVNTVMVK- 59
Query: 247 KQKINDKEVDVKKATPKPE 265
+ ++ K +D K+A P+ E
Sbjct: 60 EHYLDGKIIDPKRAIPRDE 78
Score = 42.7 bits (99), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 35/54 (64%), Gaps = 2/54 (3%)
Query: 601 GIVDKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASV 653
G+ + TE E K+ F ++G + + TL D +TGR RGF F+ F D+E+ +A++
Sbjct: 89 GVSQEATEQEFKQFFMQFGRVVDATLMIDKDTGRPRGFGFVTF-DSEAAVEATL 141
>gi|8778468|gb|AAF79476.1|AC022492_20 F1L3.34 [Arabidopsis thaliana]
Length = 392
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/164 (34%), Positives = 95/164 (57%), Gaps = 19/164 (11%)
Query: 113 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINN 172
E +F K+GE+ + + +D TG RGF F+ F D+ EK + E +HVI++
Sbjct: 102 AETFANYFGKFGEVVDSVIMTDRITGNPRGFGFVTFADSAVAEK------VLEEDHVIDD 155
Query: 173 KKIEAK------------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDK 220
+K++ K KA +K+ KIFVGGL P ++++E+K +F +G+IIE ++ YD
Sbjct: 156 RKVDLKRTLPRGDKDTDIKAVSKTRKIFVGGLPPLLEEDELKNYFCVYGDIIEHQIMYDH 215
Query: 221 SKSQRKNFCFITFEHESVVIDLLKNPK-QKINDKEVDVKKATPK 263
+ + F F+TF+ E V L + K ++ DK+V++K+A PK
Sbjct: 216 HTGRSRGFGFVTFQTEDSVDRLFSDGKVHELGDKQVEIKRAEPK 259
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+FVGG+S E E +F +FG ++++ + D+ + F F+TF +V +L+
Sbjct: 90 KLFVGGVSWETTAETFANYFGKFGEVVDSVIMTDRITGNPRGFGFVTFADSAVAEKVLEE 149
Query: 246 PKQKINDKEVDVKKATPK 263
I+D++VD+K+ P+
Sbjct: 150 -DHVIDDRKVDLKRTLPR 166
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 29/43 (67%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+ELK +F YG+I + D +TGRSRGF F+ F+ +S+++
Sbjct: 194 DELKNYFCVYGDIIEHQIMYDHHTGRSRGFGFVTFQTEDSVDR 236
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPK-QKINDKEVDVKKATPK 497
+IIE ++ YD + + F F+TF+ E V L + K ++ DK+V++K+A PK
Sbjct: 205 DIIEHQIMYDHHTGRSRGFGFVTFQTEDSVDRLFSDGKVHELGDKQVEIKRAEPK 259
Score = 39.7 bits (91), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 26/49 (53%)
Query: 607 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVED 655
E +F K+GE+ + + +D TG RGF F+ F D+ EK ED
Sbjct: 102 AETFANYFGKFGEVVDSVIMTDRITGNPRGFGFVTFADSAVAEKVLEED 150
>gi|298710527|emb|CBJ25591.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 502
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/187 (34%), Positives = 99/187 (52%), Gaps = 27/187 (14%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
GI + TEE L+ HF KYG + ++ L D TG RGF FI F+D +V D I
Sbjct: 154 GISWQTTEEGLRHHFGKYGTLADIALMKDKYTGHPRGFGFIKFEDI------TVLDEILS 207
Query: 166 GNHVINNKKIEAKKA---------------KAKSGKIFVGGLSPEMKDEEIKAHFAQFGN 210
H I+ K ++ K+A A++ KIFVGGL+P + E + +F FG
Sbjct: 208 QEHKIDGKVVDVKRAVPKSEAPGPSSRSSRPAETNKIFVGGLAPTVMMAEFRKYFETFGG 267
Query: 211 IIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGVR 270
+++ + +D+ + + F F+TF+ ++VV D++ +IN K V+VK+A PK R
Sbjct: 268 VVDAVVMFDRQTQRSRGFGFVTFQEDAVVHDIMMG-THEINGKMVEVKRAEPKEN----R 322
Query: 271 GGRGGRG 277
GR RG
Sbjct: 323 SGRAPRG 329
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 51/84 (60%), Gaps = 1/84 (1%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GK+F+GG+S + +E ++ HF ++G + + + DK + F FI FE +V+ ++L
Sbjct: 148 GKLFIGGISWQTTEEGLRHHFGKYGTLADIALMKDKYTGHPRGFGFIKFEDITVLDEILS 207
Query: 245 NPKQKINDKEVDVKKATPKPEPFG 268
+ KI+ K VDVK+A PK E G
Sbjct: 208 Q-EHKIDGKVVDVKRAVPKSEAPG 230
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
GI + TEE L+ HF KYG + ++ L D TG RGF FI F+D L++
Sbjct: 154 GISWQTTEEGLRHHFGKYGTLADIALMKDKYTGHPRGFGFIKFEDITVLDE 204
Score = 42.7 bits (99), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 39/67 (58%), Gaps = 5/67 (7%)
Query: 445 IIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGVR 504
+++ + +D+ + + F F+TF+ ++VV D++ +IN K V+VK+A PK R
Sbjct: 268 VVDAVVMFDRQTQRSRGFGFVTFQEDAVVHDIMMG-THEINGKMVEVKRAEPKEN----R 322
Query: 505 GGRGGRG 511
GR RG
Sbjct: 323 SGRAPRG 329
>gi|350592544|ref|XP_003359176.2| PREDICTED: RNA-binding protein Musashi homolog 1-like, partial [Sus
scrofa]
Length = 411
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 92/157 (58%), Gaps = 14/157 (8%)
Query: 116 LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNKKI 175
L+E+F ++GE + + DP T RSRGF F+ F D +A V+ V+A+ H +++K I
Sbjct: 85 LREYFGQFGEEKECLVMRDPLTKRSRGFGFVTFMD-----QAGVDKVLAQSRHELDSKTI 139
Query: 176 EAK---------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRK 226
+ K K ++ KIFVGGLS E++K +F QFG + + + +DK+ ++ +
Sbjct: 140 DPKVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHR 199
Query: 227 NFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
F F+TFE E +V + + +IN+K V+ KKA PK
Sbjct: 200 GFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPK 236
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 44/75 (58%), Gaps = 5/75 (6%)
Query: 109 VHKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNH 168
V+ E++K++F ++G++++ L D T R RGF F+ F+ + +EK V H
Sbjct: 167 VNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEK-----VCEIHFH 221
Query: 169 VINNKKIEAKKAKAK 183
INNK +E KKA+ K
Sbjct: 222 EINNKMVECKKAQPK 236
Score = 43.1 bits (100), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 37/57 (64%), Gaps = 2/57 (3%)
Query: 603 VDKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFY 659
V+ E++K++F ++G++++ L D T R RGF F+ F+ + +EK V +++F+
Sbjct: 167 VNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEK--VCEIHFH 221
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 26/41 (63%)
Query: 610 LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
L+E+F ++GE + + DP T RSRGF F+ F D ++K
Sbjct: 85 LREYFGQFGEEKECLVMRDPLTKRSRGFGFVTFMDQAGVDK 125
Score = 39.7 bits (91), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 30/46 (65%)
Query: 452 YDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 497
+DK+ ++ + F F+TFE E +V + + +IN+K V+ KKA PK
Sbjct: 191 FDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPK 236
>gi|225433229|ref|XP_002285419.1| PREDICTED: uncharacterized protein LOC100257917 [Vitis vinifera]
Length = 464
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 94/183 (51%), Gaps = 32/183 (17%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
GI + +E+ LKE+F YGE+ + D TGR RGF F+VF D S+ D + +
Sbjct: 12 GISWETSEDKLKEYFGSYGEVSQAVVMRDKATGRPRGFGFVVFADP------SILDRVLQ 65
Query: 166 GNHVINNKKIEAKKA-------------------------KAKSGKIFVGGLSPEMKDEE 200
H+I+ + +EAK+A K+ KIFVGGL P + +E
Sbjct: 66 EKHIIDGRTVEAKRALSREEQQTSSRAGNFNSARNSGGGGNVKTKKIFVGGLPPTLSEEG 125
Query: 201 IKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKA 260
+ +F FG++ + + YD+S + + F F++F+ E V +L +N K+V+VK+A
Sbjct: 126 FRQYFEAFGHVTDVVVMYDQSTQRPRGFGFVSFDTEDAVDRVLYKTFHDLNGKQVEVKRA 185
Query: 261 TPK 263
PK
Sbjct: 186 LPK 188
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GK+F+GG+S E ++++K +F +G + + + DK+ + + F F+ F S++ +L+
Sbjct: 6 GKLFIGGISWETSEDKLKEYFGSYGEVSQAVVMRDKATGRPRGFGFVVFADPSILDRVLQ 65
Query: 245 NPKQKINDKEVDVKKATPKPE 265
K I+ + V+ K+A + E
Sbjct: 66 E-KHIIDGRTVEAKRALSREE 85
Score = 47.4 bits (111), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 27/43 (62%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
++LKE+F YGE+ + D TGR RGF F+VF D L++
Sbjct: 20 DKLKEYFGSYGEVSQAVVMRDKATGRPRGFGFVVFADPSILDR 62
Score = 39.7 bits (91), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 28/46 (60%)
Query: 452 YDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 497
YD+S + + F F++F+ E V +L +N K+V+VK+A PK
Sbjct: 143 YDQSTQRPRGFGFVSFDTEDAVDRVLYKTFHDLNGKQVEVKRALPK 188
>gi|392863540|gb|EJB10655.1| musashi 1, variant [Coccidioides immitis RS]
Length = 608
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 52/150 (34%), Positives = 92/150 (61%), Gaps = 2/150 (1%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+ LK++FS++GE++ T+ D TGRSRGF F+ FKD +++ V++ +G +I+ K
Sbjct: 126 QSLKDYFSQFGEVQECTVMRDGATGRSRGFGFLTFKDPKTVNTVMVKEHYLDG-KIIDPK 184
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
+ + + ++ KIFVGG+S + +++ K F QFG +++ + DK + + F F+TF
Sbjct: 185 RAIPRDEQERTSKIFVGGVSQDANEQDFKKFFMQFGRVVDATLMIDKDTGRPRGFGFVTF 244
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ E+ V L P + I K ++VKKA P+
Sbjct: 245 DSEAAVEACLSQPLE-ILGKPIEVKKAQPR 273
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 35/51 (68%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYF 658
+ LK++FS++GE++ T+ D TGRSRGF F+ FKD +++ V++ Y
Sbjct: 126 QSLKDYFSQFGEVQECTVMRDGATGRSRGFGFLTFKDPKTVNTVMVKEHYL 176
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 183 KSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDL 242
+ GK+F+GGL+ E D+ +K +F+QFG + E + D + + + F F+TF+ V +
Sbjct: 110 EDGKMFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDGATGRSRGFGFLTFKDPKTVNTV 169
Query: 243 LKNPKQKINDKEVDVKKATPKPE 265
+ + ++ K +D K+A P+ E
Sbjct: 170 MVK-EHYLDGKIIDPKRAIPRDE 191
Score = 39.7 bits (91), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 27/46 (58%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLE 649
D ++ K+ F ++G + + TL D +TGR RGF F+ F ++E
Sbjct: 206 DANEQDFKKFFMQFGRVVDATLMIDKDTGRPRGFGFVTFDSEAAVE 251
>gi|302509632|ref|XP_003016776.1| hypothetical protein ARB_05069 [Arthroderma benhamiae CBS 112371]
gi|291180346|gb|EFE36131.1| hypothetical protein ARB_05069 [Arthroderma benhamiae CBS 112371]
Length = 489
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 91/150 (60%), Gaps = 2/150 (1%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+ LKE+FS++GE+ T+ D +GRSRGF F+ F D +++ V++ +G +I+ K
Sbjct: 13 QSLKEYFSQFGEVHECTVMRDGASGRSRGFGFLTFTDPKTVNTVMVKEHYLDG-KIIDPK 71
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
+ + + ++ KIFVGG+S E ++E K F QFG +++ + DK + + F F+TF
Sbjct: 72 RAIPRDEQERTSKIFVGGVSQEATEQEFKQFFMQFGRVVDATLMIDKDTGRPRGFGFVTF 131
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ E+ V L P + I+ K ++VKKA P+
Sbjct: 132 DSEAAVEATLSVPLE-IHGKAIEVKKAQPR 160
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 33/51 (64%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYF 658
+ LKE+FS++GE+ T+ D +GRSRGF F+ F D +++ V++ Y
Sbjct: 13 QSLKEYFSQFGEVHECTVMRDGASGRSRGFGFLTFTDPKTVNTVMVKEHYL 63
Score = 47.0 bits (110), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 187 IFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNP 246
+F+GGL+ E D+ +K +F+QFG + E + D + + + F F+TF V ++
Sbjct: 1 MFIGGLNWETTDQSLKEYFSQFGEVHECTVMRDGASGRSRGFGFLTFTDPKTVNTVMVK- 59
Query: 247 KQKINDKEVDVKKATPKPE 265
+ ++ K +D K+A P+ E
Sbjct: 60 EHYLDGKIIDPKRAIPRDE 78
Score = 42.7 bits (99), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 35/54 (64%), Gaps = 2/54 (3%)
Query: 601 GIVDKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASV 653
G+ + TE E K+ F ++G + + TL D +TGR RGF F+ F D+E+ +A++
Sbjct: 89 GVSQEATEQEFKQFFMQFGRVVDATLMIDKDTGRPRGFGFVTF-DSEAAVEATL 141
>gi|326489793|dbj|BAK01877.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 463
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/190 (36%), Positives = 98/190 (51%), Gaps = 28/190 (14%)
Query: 96 MEAKNKMVSHPGIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESL 154
MEA + GI E+ L+E+F KYGE+ + D TGR+RGF FIVF D
Sbjct: 1 MEADAGKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFAD---- 56
Query: 155 EKASVEDVIAEGNHVINNKKIEAKKAK--------AKSG-------------KIFVGGLS 193
A E VI E H+I+ + +EAKKA +KSG KIFVGGL+
Sbjct: 57 -PAVAERVIME-KHMIDGRMVEAKKAVPRDDQQALSKSGGSAHGSPGPSRTKKIFVGGLA 114
Query: 194 PEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDK 253
+ + + + +F QFG I + + YD + + + F FIT++ E V L ++N K
Sbjct: 115 STVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKTFHELNGK 174
Query: 254 EVDVKKATPK 263
V+VK+A PK
Sbjct: 175 MVEVKRAVPK 184
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Query: 181 KAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVI 240
+A +GK+F+GG+S + ++ ++ +F ++G ++E + D++ + + F FI F +V
Sbjct: 2 EADAGKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAE 61
Query: 241 DLLKNPKQKINDKEVDVKKATPKPE 265
++ K I+ + V+ KKA P+ +
Sbjct: 62 RVIME-KHMIDGRMVEAKKAVPRDD 85
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 30/51 (58%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVE 654
D + L+E+F KYGE+ + D TGR+RGF FIVF D E+ +E
Sbjct: 16 DTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVIME 66
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 592 AKNKMVSHPGIVDKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
++ K + G+ +TE + + +F ++G I +V + D NT R RGF FI + ++++K
Sbjct: 103 SRTKKIFVGGLASTVTEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDK 162
Query: 651 A 651
A
Sbjct: 163 A 163
>gi|242046120|ref|XP_002460931.1| hypothetical protein SORBIDRAFT_02g037690 [Sorghum bicolor]
gi|241924308|gb|EER97452.1| hypothetical protein SORBIDRAFT_02g037690 [Sorghum bicolor]
Length = 471
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 102/195 (52%), Gaps = 28/195 (14%)
Query: 96 MEAKNKMVSHPGIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESL 154
MEA + + GI + E+ L+E+F ++GE+ + D NTGR+RGF F+VF D+
Sbjct: 1 MEADSGKLFVGGISWETDEDRLREYFGRFGEVTEAVIMRDRNTGRARGFGFVVFADSGIA 60
Query: 155 EKASVEDVIAEGNHVINNKKIEAKKA---------------------KAKSGKIFVGGLS 193
E+ +++ H+I+ + +EAKKA ++ KIFVGGL+
Sbjct: 61 ERVTMDK------HMIDGRMVEAKKAVPRDDQSIASKNNGSSIGSPGPGRTRKIFVGGLA 114
Query: 194 PEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDK 253
+ + E + +F QFG I + + YD + + + F FIT++ E V L ++N K
Sbjct: 115 SNVTEVEFRRYFEQFGVITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALHKNFHELNGK 174
Query: 254 EVDVKKATPKPEPFG 268
V+VK+A PK + G
Sbjct: 175 MVEVKRAVPKEQSPG 189
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 32/47 (68%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVE 654
+ L+E+F ++GE+ + D NTGR+RGF F+VF D+ E+ +++
Sbjct: 20 DRLREYFGRFGEVTEAVIMRDRNTGRARGFGFVVFADSGIAERVTMD 66
Score = 42.4 bits (98), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 601 GIVDKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
G+ +TE E + +F ++G I +V + D NT R RGF FI + ++++KA
Sbjct: 112 GLASNVTEVEFRRYFEQFGVITDVVVMYDHNTQRPRGFGFITYDSEDAVDKA 163
>gi|440586615|emb|CCK33029.1| RRM domain protein Musashi [Platynereis dumerilii]
Length = 205
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/163 (37%), Positives = 92/163 (56%), Gaps = 18/163 (11%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
E L+E+F+KYGEI+ + DP T RSRGF F+ + D SV+ V+A G H ++ K
Sbjct: 37 EGLREYFTKYGEIKECMVMRDPITKRSRGFGFVTYAD-----PGSVDKVLANGPHELDTK 91
Query: 174 KIEAK-------------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDK 220
I+ K K ++ KIFVGGLS E++K +F+QFG I + + +DK
Sbjct: 92 LIDPKLAFPRRPNATQQPKMVTRTKKIFVGGLSASTTLEDVKQYFSQFGKIEDAMLMFDK 151
Query: 221 SKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ + + F F+TFE E VV + + +IN+K V+ KK+ K
Sbjct: 152 ATQRHRGFAFVTFECEDVVDKVCEIHFHEINNKMVECKKSPAK 194
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 45/73 (61%), Gaps = 7/73 (9%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGN-HVINN 172
E++K++FS++G+IE+ L D T R RGFAF+ F E V D + E + H INN
Sbjct: 130 EDVKQYFSQFGKIEDAMLMFDKATQRHRGFAFVTF------ECEDVVDKVCEIHFHEINN 183
Query: 173 KKIEAKKAKAKSG 185
K +E KK+ AK G
Sbjct: 184 KMVECKKSPAKGG 196
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 30/44 (68%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
E L+E+F+KYGEI+ + DP T RSRGF F+ + D S++K
Sbjct: 37 EGLREYFTKYGEIKECMVMRDPITKRSRGFGFVTYADPGSVDKV 80
Score = 45.8 bits (107), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 43/79 (54%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GK+FVGGLS + E ++ +F ++G I E + D + + F F+T+ V +L
Sbjct: 23 GKMFVGGLSWQTTPEGLREYFTKYGEIKECMVMRDPITKRSRGFGFVTYADPGSVDKVLA 82
Query: 245 NPKQKINDKEVDVKKATPK 263
N +++ K +D K A P+
Sbjct: 83 NGPHELDTKLIDPKLAFPR 101
Score = 43.9 bits (102), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 37/52 (71%), Gaps = 2/52 (3%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFY 659
E++K++FS++G+IE+ L D T R RGFAF+ F+ + ++K V +++F+
Sbjct: 130 EDVKQYFSQFGKIEDAMLMFDKATQRHRGFAFVTFECEDVVDK--VCEIHFH 179
>gi|406860631|gb|EKD13688.1| hypothetical protein MBM_07889 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 453
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 52/150 (34%), Positives = 92/150 (61%), Gaps = 2/150 (1%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+ LK++FS++GE+ T+ D +GRSRGF F+ FKD ++ V++ +G +I+ K
Sbjct: 13 QSLKDYFSQFGEVLECTVMRDGASGRSRGFGFLTFKDARTVNIVMVKEHYLDG-KIIDPK 71
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
+ + + ++ KIFVGG+S E +++ K +F QFG +++ + DK + + F F+TF
Sbjct: 72 RAIPRDEQERTSKIFVGGVSQEATEQDFKEYFMQFGRVVDATLMMDKDTGRPRGFGFVTF 131
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ E+ V L +P + I K ++VKKA P+
Sbjct: 132 DSEAAVDACLDSPLE-ILGKPIEVKKAQPR 160
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 187 IFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNP 246
+F+GGL+ E D+ +K +F+QFG ++E + D + + + F F+TF+ ++ ++++
Sbjct: 1 MFIGGLNWETTDQSLKDYFSQFGEVLECTVMRDGASGRSRGFGFLTFK-DARTVNIVMVK 59
Query: 247 KQKINDKEVDVKKATPKPE 265
+ ++ K +D K+A P+ E
Sbjct: 60 EHYLDGKIIDPKRAIPRDE 78
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 33/51 (64%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYF 658
+ LK++FS++GE+ T+ D +GRSRGF F+ FKD ++ V++ Y
Sbjct: 13 QSLKDYFSQFGEVLECTVMRDGASGRSRGFGFLTFKDARTVNIVMVKEHYL 63
Score = 43.5 bits (101), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 35/55 (63%), Gaps = 2/55 (3%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVE 654
G+ + TE+ KE+F ++G + + TL D +TGR RGF F+ F D+E+ A ++
Sbjct: 89 GVSQEATEQDFKEYFMQFGRVVDATLMMDKDTGRPRGFGFVTF-DSEAAVDACLD 142
>gi|357156001|ref|XP_003577309.1| PREDICTED: uncharacterized protein LOC100846541 [Brachypodium
distachyon]
Length = 463
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/190 (36%), Positives = 98/190 (51%), Gaps = 28/190 (14%)
Query: 96 MEAKNKMVSHPGIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESL 154
MEA + GI E+ L+E+F KYGE+ + D TGR+RGF FIVF D
Sbjct: 1 MEADAGKLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFAD---- 56
Query: 155 EKASVEDVIAEGNHVINNKKIEAKKAK--------AKSG-------------KIFVGGLS 193
A E VI E H+I+ + +EAKKA +KSG KIFVGGL+
Sbjct: 57 -PAVAERVIME-KHMIDGRMVEAKKAVPRDDQQALSKSGGSTHGSPGPSRTKKIFVGGLA 114
Query: 194 PEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDK 253
+ + + + +F QFG I + + YD + + + F FIT++ E V L ++N K
Sbjct: 115 STVNEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDKALFKTFHELNGK 174
Query: 254 EVDVKKATPK 263
V+VK+A PK
Sbjct: 175 MVEVKRAVPK 184
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 30/51 (58%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVE 654
D + L+E+F KYGE+ + D TGR+RGF FIVF D E+ +E
Sbjct: 16 DTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVIME 66
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 592 AKNKMVSHPGIVDKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
++ K + G+ + E + + +F ++G I +V + D NT R RGF FI + E+++K
Sbjct: 103 SRTKKIFVGGLASTVNEADFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDK 162
Query: 651 A 651
A
Sbjct: 163 A 163
>gi|356551592|ref|XP_003544158.1| PREDICTED: uncharacterized protein LOC100795907 [Glycine max]
Length = 479
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/190 (32%), Positives = 98/190 (51%), Gaps = 28/190 (14%)
Query: 96 MEAKNKMVSHPGIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESL 154
M++ N + GI EE L+E+FS YGE+ + D TGR+RGF F+VF D
Sbjct: 1 MQSDNGKLFIGGISWDTNEERLREYFSTYGEVVEAVIMKDRTTGRARGFGFVVFSD---- 56
Query: 155 EKASVEDVIAEGNHVINNKKIEAKKA---------------------KAKSGKIFVGGLS 193
++ +++ + H I+ + +EAKKA ++ KIFVGGL+
Sbjct: 57 --PAIAEIVIKEKHNIDGRMVEAKKAVPRDDQNILSRNSGSIHGSPGPGRTRKIFVGGLA 114
Query: 194 PEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDK 253
+ + + K +F QFG I + + YD + + + F FIT++ E V +L ++N K
Sbjct: 115 STVTESDFKKYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDKVLLKTFHELNGK 174
Query: 254 EVDVKKATPK 263
V+VK+A PK
Sbjct: 175 MVEVKRAVPK 184
Score = 47.4 bits (111), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 26/41 (63%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKD 644
D E L+E+FS YGE+ + D TGR+RGF F+VF D
Sbjct: 16 DTNEERLREYFSTYGEVVEAVIMKDRTTGRARGFGFVVFSD 56
>gi|325093053|gb|EGC46363.1| heterogeneous nuclear ribonucleoprotein HRP1 [Ajellomyces
capsulatus H88]
Length = 687
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 92/150 (61%), Gaps = 2/150 (1%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+ LK++FS++GE++ T+ D TGRSRGF F+ FKD +++ V++ +G +I+ K
Sbjct: 168 QSLKDYFSQFGEVQECTVMRDGATGRSRGFGFLTFKDPKTVNTVMVKEHYLDGK-IIDPK 226
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
+ + + ++ KIFVGG+S E +++ K F QFG +++ + DK + + F F+TF
Sbjct: 227 RAIPRDEQERTSKIFVGGVSQEATEQDFKQFFMQFGRVVDATLMIDKDSGRPRGFGFVTF 286
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ E+ V L P + I K ++VKKA P+
Sbjct: 287 DSEAAVEATLSGPLE-ILGKPIEVKKAQPR 315
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 35/51 (68%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYF 658
+ LK++FS++GE++ T+ D TGRSRGF F+ FKD +++ V++ Y
Sbjct: 168 QSLKDYFSQFGEVQECTVMRDGATGRSRGFGFLTFKDPKTVNTVMVKEHYL 218
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+F+GGL+ E D+ +K +F+QFG + E + D + + + F F+TF+ V ++
Sbjct: 155 KMFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDGATGRSRGFGFLTFKDPKTVNTVMVK 214
Query: 246 PKQKINDKEVDVKKATPKPE 265
+ ++ K +D K+A P+ E
Sbjct: 215 -EHYLDGKIIDPKRAIPRDE 233
Score = 39.7 bits (91), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 35/54 (64%), Gaps = 2/54 (3%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASV 653
G+ + TE+ K+ F ++G + + TL D ++GR RGF F+ F D+E+ +A++
Sbjct: 244 GVSQEATEQDFKQFFMQFGRVVDATLMIDKDSGRPRGFGFVTF-DSEAAVEATL 296
>gi|195628644|gb|ACG36152.1| heterogeneous nuclear ribonucleoprotein A3 [Zea mays]
Length = 384
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 94/169 (55%), Gaps = 18/169 (10%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + TEE +HF KYG I + + D +T RGF F+ F D SV D + E
Sbjct: 61 GVAWETTEESFSKHFEKYGAITDSVIMKDKHTKMPRGFGFVTFSD------PSVIDKVLE 114
Query: 166 GNHVINNKKIEAK----------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETE 215
+HVI+ + +E K K K+ KIF+GGL P + ++E+K HF+ +GN++E +
Sbjct: 115 DDHVIDGRTVEVKRTVPREEMITKDGPKTRKIFIGGLPPSLTEDELKDHFSSYGNVVEHQ 174
Query: 216 MPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQK-INDKEVDVKKATPK 263
+ D S + + F F+TFE E V ++ + + + K+V++KKA PK
Sbjct: 175 IMLDHSTGRSRGFGFVTFESEDSVERVISEGRMRDLGGKQVEIKKAEPK 223
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GKIFVGG++ E +E HF ++G I ++ + DK + F F+TF SV+ +L+
Sbjct: 55 GKIFVGGVAWETTEESFSKHFEKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVIDKVLE 114
Query: 245 NPKQKINDKEVDVKKATPKPE 265
+ I+ + V+VK+ P+ E
Sbjct: 115 D-DHVIDGRTVEVKRTVPREE 134
Score = 47.0 bits (110), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Query: 601 GIVDKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVE 654
G+ +TE ELK+HFS YG + + D +TGRSRGF F+ F+ +S+E+ E
Sbjct: 150 GLPPSLTEDELKDHFSSYGNVVEHQIMLDHSTGRSRGFGFVTFESEDSVERVISE 204
>gi|240279923|gb|EER43428.1| heterogeneous nuclear ribonucleoprotein HRP1 [Ajellomyces
capsulatus H143]
Length = 548
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 92/150 (61%), Gaps = 2/150 (1%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+ LK++FS++GE++ T+ D TGRSRGF F+ FKD +++ V++ +G +I+ K
Sbjct: 168 QSLKDYFSQFGEVQECTVMRDGATGRSRGFGFLTFKDPKTVNTVMVKEHYLDGK-IIDPK 226
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
+ + + ++ KIFVGG+S E +++ K F QFG +++ + DK + + F F+TF
Sbjct: 227 RAIPRDEQERTSKIFVGGVSQEATEQDFKQFFMQFGRVVDATLMIDKDSGRPRGFGFVTF 286
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ E+ V L P + I K ++VKKA P+
Sbjct: 287 DSEAAVEATLSGPLE-ILGKPIEVKKAQPR 315
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 35/51 (68%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYF 658
+ LK++FS++GE++ T+ D TGRSRGF F+ FKD +++ V++ Y
Sbjct: 168 QSLKDYFSQFGEVQECTVMRDGATGRSRGFGFLTFKDPKTVNTVMVKEHYL 218
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+F+GGL+ E D+ +K +F+QFG + E + D + + + F F+TF+ V ++
Sbjct: 155 KMFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDGATGRSRGFGFLTFKDPKTVNTVMVK 214
Query: 246 PKQKINDKEVDVKKATPKPE 265
+ ++ K +D K+A P+ E
Sbjct: 215 -EHYLDGKIIDPKRAIPRDE 233
Score = 39.3 bits (90), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 35/54 (64%), Gaps = 2/54 (3%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASV 653
G+ + TE+ K+ F ++G + + TL D ++GR RGF F+ F D+E+ +A++
Sbjct: 244 GVSQEATEQDFKQFFMQFGRVVDATLMIDKDSGRPRGFGFVTF-DSEAAVEATL 296
>gi|156837267|ref|XP_001642663.1| hypothetical protein Kpol_1076p11 [Vanderwaltozyma polyspora DSM
70294]
gi|156113219|gb|EDO14805.1| hypothetical protein Kpol_1076p11 [Vanderwaltozyma polyspora DSM
70294]
Length = 526
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 100/163 (61%), Gaps = 12/163 (7%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + TEE L+++F+KYG++ + + D NTGRSRGF F+ F+D S+ D + +
Sbjct: 162 GLNWETTEETLRDYFNKYGKVVELKIMKDNNTGRSRGFGFLTFEDATSV------DEVVK 215
Query: 166 GNHVINNKKIEAKKA-----KAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDK 220
H+++ K I+ K+A + K+GKIFVGG+ +++ +E + FAQ+G II+ ++ DK
Sbjct: 216 TQHILDGKVIDPKRAIPREEQDKTGKIFVGGIGADVRPKEFEDFFAQYGTIIDAQLMLDK 275
Query: 221 SKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ + F F+T++ V + +N + K++++K+A P+
Sbjct: 276 DTGRSRGFGFVTYDSPDAVDRVCQNKFIEFKGKQIEIKRAEPR 318
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 52/82 (63%), Gaps = 1/82 (1%)
Query: 184 SGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLL 243
S K+F+GGL+ E +E ++ +F ++G ++E ++ D + + + F F+TFE + V +++
Sbjct: 155 SCKMFIGGLNWETTEETLRDYFNKYGKVVELKIMKDNNTGRSRGFGFLTFEDATSVDEVV 214
Query: 244 KNPKQKINDKEVDVKKATPKPE 265
K + ++ K +D K+A P+ E
Sbjct: 215 KT-QHILDGKVIDPKRAIPREE 235
Score = 47.8 bits (112), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 32/43 (74%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
E L+++F+KYG++ + + D NTGRSRGF F+ F+D S+++
Sbjct: 170 ETLRDYFNKYGKVVELKIMKDNNTGRSRGFGFLTFEDATSVDE 212
Score = 38.9 bits (89), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 29/43 (67%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+E ++ F++YG I + L D +TGRSRGF F+ + +++++
Sbjct: 254 KEFEDFFAQYGTIIDAQLMLDKDTGRSRGFGFVTYDSPDAVDR 296
>gi|115486383|ref|NP_001068335.1| Os11g0637700 [Oryza sativa Japonica Group]
gi|108864610|gb|ABA94921.2| RNA-binding protein, putative, expressed [Oryza sativa Japonica
Group]
gi|113645557|dbj|BAF28698.1| Os11g0637700 [Oryza sativa Japonica Group]
gi|215697828|dbj|BAG92021.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215740693|dbj|BAG97349.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 467
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/190 (36%), Positives = 98/190 (51%), Gaps = 28/190 (14%)
Query: 96 MEAKNKMVSHPGIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESL 154
MEA + GI E+ L+E+F KYGE+ + D TGR+RGF FIVF D
Sbjct: 1 MEADAGKLFIGGISWDTNEDRLREYFDKYGEVVEAVIMRDRATGRARGFGFIVFAD---- 56
Query: 155 EKASVEDVIAEGNHVINNKKIEAKKAK--------AKSG-------------KIFVGGLS 193
A E VI E H+I+ + +EAKKA +KSG KIFVGGL+
Sbjct: 57 -PAVAERVIME-KHMIDGRMVEAKKAVPRDDQHALSKSGGSAHGSPGPSRTKKIFVGGLA 114
Query: 194 PEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDK 253
+ + + + +F QFG I + + YD + + + F FIT++ E V L ++N K
Sbjct: 115 STVTEADFRKYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKTFHELNGK 174
Query: 254 EVDVKKATPK 263
V+VK+A PK
Sbjct: 175 MVEVKRAVPK 184
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Query: 181 KAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVI 240
+A +GK+F+GG+S + ++ ++ +F ++G ++E + D++ + + F FI F +V
Sbjct: 2 EADAGKLFIGGISWDTNEDRLREYFDKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAE 61
Query: 241 DLLKNPKQKINDKEVDVKKATPKPE 265
++ K I+ + V+ KKA P+ +
Sbjct: 62 RVIME-KHMIDGRMVEAKKAVPRDD 85
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 30/51 (58%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVE 654
D + L+E+F KYGE+ + D TGR+RGF FIVF D E+ +E
Sbjct: 16 DTNEDRLREYFDKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVIME 66
Score = 42.7 bits (99), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Query: 592 AKNKMVSHPGIVDKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
++ K + G+ +TE + +++F ++G I +V + D NT R RGF FI + ++++K
Sbjct: 103 SRTKKIFVGGLASTVTEADFRKYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDK 162
Query: 651 A 651
A
Sbjct: 163 A 163
>gi|307136289|gb|ADN34116.1| heterogeneous nuclear ribonucleoprotein a1 [Cucumis melo subsp.
melo]
Length = 699
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 116/238 (48%), Gaps = 46/238 (19%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + TE+ ++FSKYGEI + + D +TGR RGF F+ F D ++ D++ +
Sbjct: 427 GVAWETTEDTFSDYFSKYGEIADSVIMIDKHTGRPRGFGFVTFCD------PAIADMVLK 480
Query: 166 GNHVINNKKIEAK----------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETE 215
+H+I+ + +E K K +++ KIFVGG+ P + + E K +F+ FG IIE +
Sbjct: 481 IDHIIDGRAVEVKRTVPRADMNDKMVSRTKKIFVGGIPPGLTEVEFKDYFSSFGRIIEHQ 540
Query: 216 MPYDKSKSQRKNFCFITFEHESVVIDLLKNPK-QKINDKEVDVKKATPKPEPFGVRGGRG 274
+ D + + F FITFE+E V ++ + ++ K+V++KKA PK + G
Sbjct: 541 IMIDYKTKRSRGFGFITFENEDSVDNIFSGDRIHELGGKQVEIKKAVPKKVAYDFNSNSG 600
Query: 275 GR---------GG------------------RGGRGGRMAGGYGGYGGYGGGYGGILY 305
GG GG GG A YG Y YG G+G +Y
Sbjct: 601 HTSSGYDMYRCGGLYDDIIGTDFGPYDLYAPYGGFGGNYASFYGAY-NYGFGFGASMY 657
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 61/112 (54%), Gaps = 7/112 (6%)
Query: 154 LEKASVEDVIAEGNHVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIE 213
LE+A+V+ +E I N + + SGK+FVGG++ E ++ +F+++G I +
Sbjct: 396 LEQANVDSTRSE----IKNSTTQYDSSS--SGKLFVGGVAWETTEDTFSDYFSKYGEIAD 449
Query: 214 TEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE 265
+ + DK + + F F+TF + + D++ I+ + V+VK+ P+ +
Sbjct: 450 SVIMIDKHTGRPRGFGFVTF-CDPAIADMVLKIDHIIDGRAVEVKRTVPRAD 500
Score = 42.4 bits (98), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKD 644
G+ + TE+ ++FSKYGEI + + D +TGR RGF F+ F D
Sbjct: 427 GVAWETTEDTFSDYFSKYGEIADSVIMIDKHTGRPRGFGFVTFCD 471
Score = 40.4 bits (93), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 65/171 (38%), Gaps = 22/171 (12%)
Query: 387 VADNLLLCDNFPSIRELEIPEAFLTKTTTVPMTTTEHMVLVTGT--DMMHMEVTEAVPM- 443
+AD +L D+ R +E+ M + + V G + +E +
Sbjct: 474 IADMVLKIDHIIDGRAVEVKRTVPRADMNDKMVSRTKKIFVGGIPPGLTEVEFKDYFSSF 533
Query: 444 -EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPK-QKINDKEVDVKKATPKPEPF 501
IIE ++ D + + F FITFE+E V ++ + ++ K+V++KKA PK +
Sbjct: 534 GRIIEHQIMIDYKTKRSRGFGFITFENEDSVDNIFSGDRIHELGGKQVEIKKAVPKKVAY 593
Query: 502 GVRGGRGGRGGRGGRGGRMAGG---------------YGGYGGYGGGYGEL 537
G G GG Y YGG+GG Y
Sbjct: 594 DFNSNSGHTS--SGYDMYRCGGLYDDIIGTDFGPYDLYAPYGGFGGNYASF 642
Score = 39.7 bits (91), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 7/67 (10%)
Query: 590 VEAKNKMVSHP------GIVDKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVF 642
+ +KMVS GI +TE E K++FS +G I + D T RSRGF FI F
Sbjct: 499 ADMNDKMVSRTKKIFVGGIPPGLTEVEFKDYFSSFGRIIEHQIMIDYKTKRSRGFGFITF 558
Query: 643 KDTESLE 649
++ +S++
Sbjct: 559 ENEDSVD 565
>gi|320581591|gb|EFW95811.1| Subunit of cleavage factor I [Ogataea parapolymorpha DL-1]
Length = 431
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 100/163 (61%), Gaps = 12/163 (7%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + TEE +K +FS++G++ ++T+ D TGRSRGF F+ F + S+ D + +
Sbjct: 112 GLNWETTEESMKNYFSQFGDVIDLTIMKDNATGRSRGFGFLTFASSSSV------DEVLK 165
Query: 166 GNHVINNKKIEAKKA-----KAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDK 220
HV++ K I+ K+A + K+GKIFVGG++PE+ + E +F QFGNII++++ DK
Sbjct: 166 KTHVLDGKLIDPKRAIPKEEQDKTGKIFVGGVAPEVTEAEFTEYFQQFGNIIDSQLMLDK 225
Query: 221 SKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ + + F+T++ V + +N + K +++K+A P+
Sbjct: 226 DTGRSRGYGFVTYDSPDAVDRVTQNKYVLFHGKNMEIKRAEPR 268
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 53/91 (58%), Gaps = 1/91 (1%)
Query: 175 IEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFE 234
+ A GK+F+GGL+ E +E +K +F+QFG++I+ + D + + + F F+TF
Sbjct: 96 VRADIQSKDQGKMFIGGLNWETTEESMKNYFSQFGDVIDLTIMKDNATGRSRGFGFLTFA 155
Query: 235 HESVVIDLLKNPKQKINDKEVDVKKATPKPE 265
S V ++LK ++ K +D K+A PK E
Sbjct: 156 SSSSVDEVLKK-THVLDGKLIDPKRAIPKEE 185
Score = 43.9 bits (102), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 31/43 (72%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
E +K +FS++G++ ++T+ D TGRSRGF F+ F + S+++
Sbjct: 120 ESMKNYFSQFGDVIDLTIMKDNATGRSRGFGFLTFASSSSVDE 162
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Query: 601 GIVDKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKAS 652
G+ ++TE E E+F ++G I + L D +TGRSRG+ F+ + +++++ +
Sbjct: 196 GVAPEVTEAEFTEYFQQFGNIIDSQLMLDKDTGRSRGYGFVTYDSPDAVDRVT 248
>gi|256081430|ref|XP_002576973.1| heterogeneous nuclear ribonucleoprotein [Schistosoma mansoni]
gi|350645372|emb|CCD59901.1| heterogeneous nuclear ribonucleoprotein,putative [Schistosoma
mansoni]
Length = 381
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 90/152 (59%), Gaps = 8/152 (5%)
Query: 115 ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNKK 174
+LKE+FS++G++ +K D TG SRGF F+ + + + K V++ H + NKK
Sbjct: 66 DLKEYFSRWGKVTQCIIKLDRFTGNSRGFGFVTLESEDCVSK-----VLSVPEHWLKNKK 120
Query: 175 IEAKKAKAKS---GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFI 231
I+ KKAK KIFVGG+ PE+ +++I+ +F+ FG + ++PYD K +RK++ F+
Sbjct: 121 IDPKKAKPSREPLKKIFVGGIDPEVTEDQIREYFSSFGKVESLDLPYDTQKGKRKHYIFV 180
Query: 232 TFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+F E+ + +Q I ++ DV+ A +
Sbjct: 181 SFSTEAAAKKAISKERQDIFGRQCDVRVAVTR 212
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 49/84 (58%)
Query: 184 SGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLL 243
S K+FVGGLS E + ++K +F+++G + + + D+ + F F+T E E V +L
Sbjct: 50 SRKLFVGGLSWETNENDLKEYFSRWGKVTQCIIKLDRFTGNSRGFGFVTLESEDCVSKVL 109
Query: 244 KNPKQKINDKEVDVKKATPKPEPF 267
P+ + +K++D KKA P EP
Sbjct: 110 SVPEHWLKNKKIDPKKAKPSREPL 133
Score = 39.3 bits (90), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 27/42 (64%)
Query: 609 ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+LKE+FS++G++ +K D TG SRGF F+ + + + K
Sbjct: 66 DLKEYFSRWGKVTQCIIKLDRFTGNSRGFGFVTLESEDCVSK 107
Score = 38.9 bits (89), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 61/158 (38%), Gaps = 36/158 (22%)
Query: 368 SQNAIKLYLTRSSYREWGHVADNLLLCDNFPS----------------IRELEIPEAFLT 411
++N +K Y +R WG V ++ D F + L +PE +L
Sbjct: 63 NENDLKEYFSR-----WGKVTQCIIKLDRFTGNSRGFGFVTLESEDCVSKVLSVPEHWLK 117
Query: 412 KTTTVPMTTTEHM-----VLVTGTDMMHMEVTEAVPMEIIET-------EMPYDKSKSQR 459
P + V G D EVTE E + ++PYD K +R
Sbjct: 118 NKKIDPKKAKPSREPLKKIFVGGIDP---EVTEDQIREYFSSFGKVESLDLPYDTQKGKR 174
Query: 460 KNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 497
K++ F++F E+ + +Q I ++ DV+ A +
Sbjct: 175 KHYIFVSFSTEAAAKKAISKERQDIFGRQCDVRVAVTR 212
>gi|224129580|ref|XP_002320621.1| predicted protein [Populus trichocarpa]
gi|222861394|gb|EEE98936.1| predicted protein [Populus trichocarpa]
Length = 183
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 94/181 (51%), Gaps = 18/181 (9%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
GI TEE L++HF+ YGE+ V + D TGR RGF F+VF D S+ D + +
Sbjct: 9 GIAWDTTEETLRDHFNLYGEVSQVVIMRDKTTGRPRGFGFVVFSD------PSLLDPVLQ 62
Query: 166 GNHVINNKKIEAKK-----------AKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIET 214
H I+ + + ++ KIFVGGL P + ++ + +F +G++ +
Sbjct: 63 DKHTIDGRSVMTLSPFSSNSSNFLFCNFRTNKIFVGGLPPTLMEDAFRQYFQSYGHVCDV 122
Query: 215 EMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGVRGGRG 274
+ YD+ + + F FITF+ E V ++L+ ++N K V+VK+A PK G G G
Sbjct: 123 VLMYDQQTQRPRGFGFITFDTEDAVDNVLQKTFHELNGKLVEVKRALPKDANPGGEGRDG 182
Query: 275 G 275
G
Sbjct: 183 G 183
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 28/46 (60%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLE 649
D E L++HF+ YGE+ V + D TGR RGF F+VF D L+
Sbjct: 13 DTTEETLRDHFNLYGEVSQVVIMRDKTTGRPRGFGFVVFSDPSLLD 58
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GK+F+GG++ + +E ++ HF +G + + + DK+ + + F F+ F S++ +L+
Sbjct: 3 GKLFIGGIAWDTTEETLRDHFNLYGEVSQVVIMRDKTTGRPRGFGFVVFSDPSLLDPVLQ 62
Query: 245 NPKQKINDKEV 255
+ K I+ + V
Sbjct: 63 D-KHTIDGRSV 72
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%)
Query: 445 IIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGVR 504
+ + + YD+ + + F FITF+ E V ++L+ ++N K V+VK+A PK G
Sbjct: 119 VCDVVLMYDQQTQRPRGFGFITFDTEDAVDNVLQKTFHELNGKLVEVKRALPKDANPGGE 178
Query: 505 GGRGG 509
G GG
Sbjct: 179 GRDGG 183
>gi|440474936|gb|ELQ43651.1| heterogeneous nuclear ribonucleoprotein A/B [Magnaporthe oryzae
Y34]
gi|440479945|gb|ELQ60674.1| heterogeneous nuclear ribonucleoprotein A/B [Magnaporthe oryzae
P131]
Length = 632
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/150 (38%), Positives = 92/150 (61%), Gaps = 2/150 (1%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
E L+++FS++GE+ T+ D TGRSRGF F+ FKD +++ V++ +G +I+ K
Sbjct: 197 ESLRDYFSQFGEVIECTVMRDGTTGRSRGFGFLTFKDPKTVNIVMVKEHYLDG-KIIDPK 255
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
+ + + K+ KIFVGG+S E D+E K FAQFG +++ + DK + + F F+TF
Sbjct: 256 RAIPRDEQEKTSKIFVGGVSQETTDQEFKDFFAQFGRVVDATLMMDKDTGRPRGFGFVTF 315
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKATPK 263
E E+ V L +I+ K ++VKKA P+
Sbjct: 316 ESEAGVEACLAR-DLEIHGKLIEVKKAQPR 344
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 52/81 (64%), Gaps = 3/81 (3%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF-EHESVVIDLLK 244
K+F+GGL+ E DE ++ +F+QFG +IE + D + + + F F+TF + ++V I ++K
Sbjct: 184 KMFIGGLNWETTDESLRDYFSQFGEVIECTVMRDGTTGRSRGFGFLTFKDPKTVNIVMVK 243
Query: 245 NPKQKINDKEVDVKKATPKPE 265
+ ++ K +D K+A P+ E
Sbjct: 244 --EHYLDGKIIDPKRAIPRDE 262
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 34/51 (66%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYF 658
E L+++FS++GE+ T+ D TGRSRGF F+ FKD +++ V++ Y
Sbjct: 197 ESLRDYFSQFGEVIECTVMRDGTTGRSRGFGFLTFKDPKTVNIVMVKEHYL 247
Score = 43.1 bits (100), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 601 GIVDKIT-EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFY 659
G+ + T +E K+ F+++G + + TL D +TGR RGF F+ F+ +E D+ +
Sbjct: 273 GVSQETTDQEFKDFFAQFGRVVDATLMMDKDTGRPRGFGFVTFESEAGVEACLARDLEIH 332
>gi|356527120|ref|XP_003532161.1| PREDICTED: uncharacterized protein LOC100805131 [Glycine max]
Length = 513
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/171 (33%), Positives = 88/171 (51%), Gaps = 27/171 (15%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
E LKE+F KYGE+ + D TGR+RGF F+VF D E+ ++ H+I+ +
Sbjct: 54 ERLKEYFGKYGEVIETVIMRDRVTGRARGFGFVVFGDPSVAERVIMD------KHIIDGR 107
Query: 174 KIEAKKA---------------------KAKSGKIFVGGLSPEMKDEEIKAHFAQFGNII 212
+EAKKA ++ KIFVGGL + + + K +F QFG I
Sbjct: 108 TVEAKKAVPRDDQQNINRQSGSAHVSPGPGRTKKIFVGGLPSTITESDFKTYFDQFGTIT 167
Query: 213 ETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ + YD + + + F FIT++ E V +L ++N K V+VK+A PK
Sbjct: 168 DVVVMYDHNTQRPRGFGFITYDSEEAVDRVLYKTFHELNGKMVEVKRAVPK 218
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 53/90 (58%), Gaps = 1/90 (1%)
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
E +K ++ GK+F+GG+S + +E +K +F ++G +IET + D+ + + F F+ F
Sbjct: 29 NFEIRKMESDLGKLFIGGISWDTDEERLKEYFGKYGEVIETVIMRDRVTGRARGFGFVVF 88
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKATPK 263
SV ++ + K I+ + V+ KKA P+
Sbjct: 89 GDPSVAERVIMD-KHIIDGRTVEAKKAVPR 117
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 28/47 (59%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D E LKE+F KYGE+ + D TGR+RGF F+VF D E+
Sbjct: 50 DTDEERLKEYFGKYGEVIETVIMRDRVTGRARGFGFVVFGDPSVAER 96
>gi|238007140|gb|ACR34605.1| unknown [Zea mays]
gi|413926095|gb|AFW66027.1| hypothetical protein ZEAMMB73_185087 [Zea mays]
Length = 366
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 94/169 (55%), Gaps = 18/169 (10%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + TEE +HF KYG I + + D +T RGF F+ F D SV D + E
Sbjct: 43 GVAWETTEESFSKHFEKYGAITDSVIMKDKHTKMPRGFGFVTFSD------PSVIDKVLE 96
Query: 166 GNHVINNKKIEAK----------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETE 215
+HVI+ + +E K K K+ KIF+GGL P + ++E+K HF+ +GN++E +
Sbjct: 97 DDHVIDGRTVEVKRTVPREEMITKDGPKTRKIFIGGLPPSLTEDELKDHFSSYGNVVEHQ 156
Query: 216 MPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQK-INDKEVDVKKATPK 263
+ D S + + F FITFE E V ++ + + + K+V++KKA PK
Sbjct: 157 IMLDHSTGRSRGFGFITFESEDSVERVISEGRMRDLGGKQVEIKKAEPK 205
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 184 SGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLL 243
SGKIFVGG++ E +E HF ++G I ++ + DK + F F+TF SV+ +L
Sbjct: 36 SGKIFVGGVAWETTEESFSKHFEKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVIDKVL 95
Query: 244 KNPKQKINDKEVDVKKATPKPE 265
++ I+ + V+VK+ P+ E
Sbjct: 96 ED-DHVIDGRTVEVKRTVPREE 116
Score = 47.4 bits (111), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Query: 601 GIVDKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVE 654
G+ +TE ELK+HFS YG + + D +TGRSRGF FI F+ +S+E+ E
Sbjct: 132 GLPPSLTEDELKDHFSSYGNVVEHQIMLDHSTGRSRGFGFITFESEDSVERVISE 186
>gi|357459939|ref|XP_003600251.1| Heterogeneous nuclear ribonucleoprotein A1 [Medicago truncatula]
gi|355489299|gb|AES70502.1| Heterogeneous nuclear ribonucleoprotein A1 [Medicago truncatula]
Length = 481
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 88/171 (51%), Gaps = 27/171 (15%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
E LKE+F+ YGE+ + D TGR+RGF F+VF D E+ ++ H+I+ +
Sbjct: 20 ERLKEYFATYGEVIEAVIMRDRATGRARGFGFVVFSDPAVAERVIIDK------HIIDGR 73
Query: 174 KIEAKKA---------------------KAKSGKIFVGGLSPEMKDEEIKAHFAQFGNII 212
+EAKKA ++ KIFVGGL + + + K +F QFG I
Sbjct: 74 TVEAKKAVPRDDQQNINRQTGSVQGSPGPGRTKKIFVGGLPSTITESDFKMYFDQFGTIT 133
Query: 213 ETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ + YD + + + F FIT++ E V +L ++N K V+VK+A PK
Sbjct: 134 DVVVMYDHNTQRPRGFGFITYDSEEAVDRVLYKTFHELNGKMVEVKRAVPK 184
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 49/85 (57%), Gaps = 9/85 (10%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEH----ESVVI 240
GK+F+GG+S + +E +K +FA +G +IE + D++ + + F F+ F E V+I
Sbjct: 6 GKLFIGGISWDTDEERLKEYFATYGEVIEAVIMRDRATGRARGFGFVVFSDPAVAERVII 65
Query: 241 DLLKNPKQKINDKEVDVKKATPKPE 265
D K I+ + V+ KKA P+ +
Sbjct: 66 D-----KHIIDGRTVEAKKAVPRDD 85
Score = 48.5 bits (114), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 30/51 (58%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVE 654
D E LKE+F+ YGE+ + D TGR+RGF F+VF D E+ ++
Sbjct: 16 DTDEERLKEYFATYGEVIEAVIMRDRATGRARGFGFVVFSDPAVAERVIID 66
>gi|448522704|ref|XP_003868757.1| hypothetical protein CORT_0C04790 [Candida orthopsilosis Co 90-125]
gi|380353097|emb|CCG25853.1| hypothetical protein CORT_0C04790 [Candida orthopsilosis]
Length = 488
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/163 (35%), Positives = 94/163 (57%), Gaps = 12/163 (7%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ TEE L +FSK+GEI + T+ D TGRSRGF F+ FKD ++ DV+ +
Sbjct: 177 GLNWDTTEEGLVNYFSKFGEITDYTIMKDNATGRSRGFGFLTFKDPSAV------DVVIK 230
Query: 166 GNHVINNKKIEAKKA-----KAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDK 220
+H+++ K I+ K+A + + GKIF+GG+ P + + E F++FG II+ ++ DK
Sbjct: 231 QDHILDGKLIDPKRAISREDQDRVGKIFIGGIDPMVSENEFNDFFSKFGTIIDCQLMIDK 290
Query: 221 SKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ + F FITF+ V + N + K ++VK+A P+
Sbjct: 291 DTGRSRGFGFITFDSPDAVDRVCVNKFLTLKGKAMEVKRAAPR 333
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 30/46 (65%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLE 649
D E L +FSK+GEI + T+ D TGRSRGF F+ FKD +++
Sbjct: 181 DTTEEGLVNYFSKFGEITDYTIMKDNATGRSRGFGFLTFKDPSAVD 226
Score = 44.3 bits (103), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 184 SGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLL 243
SGK+F+GGL+ + +E + +F++FG I + + D + + + F F+TF+ S V D++
Sbjct: 170 SGKMFIGGLNWDTTEEGLVNYFSKFGEITDYTIMKDNATGRSRGFGFLTFKDPSAV-DVV 228
Query: 244 KNPKQKINDKEVDVKKA 260
++ K +D K+A
Sbjct: 229 IKQDHILDGKLIDPKRA 245
Score = 43.9 bits (102), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Query: 601 GIVDKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASV 653
GI ++E E + FSK+G I + L D +TGRSRGF FI F +++++ V
Sbjct: 261 GIDPMVSENEFNDFFSKFGTIIDCQLMIDKDTGRSRGFGFITFDSPDAVDRVCV 314
>gi|256081434|ref|XP_002576975.1| heterogeneous nuclear ribonucleoprotein [Schistosoma mansoni]
gi|350645374|emb|CCD59903.1| heterogeneous nuclear ribonucleoprotein,putative [Schistosoma
mansoni]
Length = 380
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 90/152 (59%), Gaps = 8/152 (5%)
Query: 115 ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNKK 174
+LKE+FS++G++ +K D TG SRGF F+ + + + K V++ H + NKK
Sbjct: 66 DLKEYFSRWGKVTQCIIKLDRFTGNSRGFGFVTLESEDCVSK-----VLSVPEHWLKNKK 120
Query: 175 IEAKKAKAKS---GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFI 231
I+ KKAK KIFVGG+ PE+ +++I+ +F+ FG + ++PYD K +RK++ F+
Sbjct: 121 IDPKKAKPSREPLKKIFVGGIDPEVTEDQIREYFSSFGKVESLDLPYDTQKGKRKHYIFV 180
Query: 232 TFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+F E+ + +Q I ++ DV+ A +
Sbjct: 181 SFSTEAAAKKAISKERQDIFGRQCDVRVAVTR 212
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 49/84 (58%)
Query: 184 SGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLL 243
S K+FVGGLS E + ++K +F+++G + + + D+ + F F+T E E V +L
Sbjct: 50 SRKLFVGGLSWETNENDLKEYFSRWGKVTQCIIKLDRFTGNSRGFGFVTLESEDCVSKVL 109
Query: 244 KNPKQKINDKEVDVKKATPKPEPF 267
P+ + +K++D KKA P EP
Sbjct: 110 SVPEHWLKNKKIDPKKAKPSREPL 133
Score = 39.3 bits (90), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 27/42 (64%)
Query: 609 ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+LKE+FS++G++ +K D TG SRGF F+ + + + K
Sbjct: 66 DLKEYFSRWGKVTQCIIKLDRFTGNSRGFGFVTLESEDCVSK 107
Score = 38.9 bits (89), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 61/158 (38%), Gaps = 36/158 (22%)
Query: 368 SQNAIKLYLTRSSYREWGHVADNLLLCDNFPS----------------IRELEIPEAFLT 411
++N +K Y +R WG V ++ D F + L +PE +L
Sbjct: 63 NENDLKEYFSR-----WGKVTQCIIKLDRFTGNSRGFGFVTLESEDCVSKVLSVPEHWLK 117
Query: 412 KTTTVPMTTTEHM-----VLVTGTDMMHMEVTEAVPMEIIET-------EMPYDKSKSQR 459
P + V G D EVTE E + ++PYD K +R
Sbjct: 118 NKKIDPKKAKPSREPLKKIFVGGIDP---EVTEDQIREYFSSFGKVESLDLPYDTQKGKR 174
Query: 460 KNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 497
K++ F++F E+ + +Q I ++ DV+ A +
Sbjct: 175 KHYIFVSFSTEAAAKKAISKERQDIFGRQCDVRVAVTR 212
>gi|50294199|ref|XP_449511.1| hypothetical protein [Candida glabrata CBS 138]
gi|49528825|emb|CAG62487.1| unnamed protein product [Candida glabrata]
Length = 513
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 99/163 (60%), Gaps = 12/163 (7%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + TE+ L+E+FSKYG + + + DPNTGRSRGF F+ F S+ D + +
Sbjct: 136 GLNWETTEDGLREYFSKYGNVVELKIMKDPNTGRSRGFGFLSFDAPSSV------DEVVK 189
Query: 166 GNHVINNKKIEAKKA-----KAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDK 220
H+++ K I+ K+A + K+GKIFVGGL +++ +E + +F+Q+G II+ ++ DK
Sbjct: 190 TQHILDGKVIDPKRAIPREEQDKTGKIFVGGLGTDVRPKEFEEYFSQWGTIIDAQLMLDK 249
Query: 221 SKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ + F F+T++ + ++ ++ K++++K+A P+
Sbjct: 250 DTGRSRGFGFVTYDSPDAAEKVCESRYREFKGKQIEIKRAEPR 292
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 63/96 (65%), Gaps = 2/96 (2%)
Query: 170 INNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFC 229
N ++++A ++ ++ K+F+GGL+ E ++ ++ +F+++GN++E ++ D + + + F
Sbjct: 116 ANRRQVKADLSR-ENCKMFIGGLNWETTEDGLREYFSKYGNVVELKIMKDPNTGRSRGFG 174
Query: 230 FITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE 265
F++F+ S V +++K + ++ K +D K+A P+ E
Sbjct: 175 FLSFDAPSSVDEVVKT-QHILDGKVIDPKRAIPREE 209
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
G+ + TE+ L+E+FSKYG + + + DPNTGRSRGF F+ F S+++
Sbjct: 136 GLNWETTEDGLREYFSKYGNVVELKIMKDPNTGRSRGFGFLSFDAPSSVDE 186
Score = 42.7 bits (99), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 30/48 (62%)
Query: 603 VDKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D +E +E+FS++G I + L D +TGRSRGF F+ + ++ EK
Sbjct: 223 TDVRPKEFEEYFSQWGTIIDAQLMLDKDTGRSRGFGFVTYDSPDAAEK 270
>gi|347966814|ref|XP_321133.5| AGAP001930-PA [Anopheles gambiae str. PEST]
gi|347966816|ref|XP_003435970.1| AGAP001930-PB [Anopheles gambiae str. PEST]
gi|333469887|gb|EAA00972.5| AGAP001930-PA [Anopheles gambiae str. PEST]
gi|333469888|gb|EGK97443.1| AGAP001930-PB [Anopheles gambiae str. PEST]
Length = 412
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 93/160 (58%), Gaps = 15/160 (9%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
E L+ +FS+YGE+ + + + TGRSRGF F+ F D E++E+A + G H ++ +
Sbjct: 32 ENLQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPENVERA-----LENGPHTLDGR 86
Query: 174 KIEAKKAKAKS----------GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKS 223
I+ K +S K+F+GGL P + + ++++ F ++G ++E + YD+ K
Sbjct: 87 TIDPKPCNPRSQHKPKRTGGYPKVFLGGLPPNITETDLRSFFCRYGTVMEVVIMYDQEKK 146
Query: 224 QRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ + F F++FE+ES V + I+ K+V+VKKA P+
Sbjct: 147 KSRGFGFLSFENESAVERATTDHFVHISGKQVEVKKAEPR 186
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 48/91 (52%)
Query: 173 KKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFIT 232
K I A+ + GK+FVGGLS E E ++ +F+++G +I+ + + + + F F+T
Sbjct: 6 KMIPAELDDHEKGKLFVGGLSWETSHENLQRYFSRYGEVIDCVVMKNNETGRSRGFGFVT 65
Query: 233 FEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
F V L+N ++ + +D K P+
Sbjct: 66 FADPENVERALENGPHTLDGRTIDPKPCNPR 96
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 31/44 (70%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
E L+ +FS+YGE+ + + + TGRSRGF F+ F D E++E+A
Sbjct: 32 ENLQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPENVERA 75
Score = 39.7 bits (91), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 601 GIVDKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVE 654
G+ ITE +L+ F +YG + V + D +SRGF F+ F++ ++E+A+ +
Sbjct: 114 GLPPNITETDLRSFFCRYGTVMEVVIMYDQEKKKSRGFGFLSFENESAVERATTD 168
Score = 39.7 bits (91), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Query: 427 VTGTDMMHMEVTEAVPMEIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKIND 486
+T TD+ ME++ + YD+ K + + F F++FE+ES V + I+
Sbjct: 119 ITETDLRSFFCRYGTVMEVV---IMYDQEKKKSRGFGFLSFENESAVERATTDHFVHISG 175
Query: 487 KEVDVKKATPK 497
K+V+VKKA P+
Sbjct: 176 KQVEVKKAEPR 186
>gi|396473500|ref|XP_003839355.1| hypothetical protein LEMA_P030280.1 [Leptosphaeria maculans JN3]
gi|312215924|emb|CBX95876.1| hypothetical protein LEMA_P030280.1 [Leptosphaeria maculans JN3]
Length = 547
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 96/158 (60%), Gaps = 3/158 (1%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + TE+ LK +F+++GE+ T+ D TGRSRGF F+ F+D + + V++ +
Sbjct: 93 GLNWETTEDSLKGYFTQFGEVSECTVMRDSATGRSRGFGFLTFRDPKCVNIVMVKEHYLD 152
Query: 166 GNHVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQR 225
G +I+ K+ ++ + ++ KIFVGG+S E +E+ A F QFG +++ + DK +
Sbjct: 153 GK-IIDPKRAIPREEQERTSKIFVGGVSQEATEEDFTAFFKQFGRVVDATLMMDKETGRP 211
Query: 226 KNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ F F+TF+ ++ V LK P Q I K ++VK+A P+
Sbjct: 212 RGFGFVTFDGDAAVDATLKGPLQ-ILGKPIEVKRAQPR 248
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 62/113 (54%), Gaps = 6/113 (5%)
Query: 153 SLEKASVEDVIAEGNHVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNII 212
+L ++ VE A NHV N+ A ++ K+F+GGL+ E ++ +K +F QFG +
Sbjct: 60 NLMRSHVEKCFAY-NHVPLNQV----NANSQCRKMFIGGLNWETTEDSLKGYFTQFGEVS 114
Query: 213 ETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE 265
E + D + + + F F+TF + ++++ + ++ K +D K+A P+ E
Sbjct: 115 ECTVMRDSATGRSRGFGFLTF-RDPKCVNIVMVKEHYLDGKIIDPKRAIPREE 166
Score = 46.6 bits (109), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 32/51 (62%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYF 658
+ LK +F+++GE+ T+ D TGRSRGF F+ F+D + + V++ Y
Sbjct: 101 DSLKGYFTQFGEVSECTVMRDSATGRSRGFGFLTFRDPKCVNIVMVKEHYL 151
>gi|403213324|emb|CCK67826.1| hypothetical protein KNAG_0A01370 [Kazachstania naganishii CBS
8797]
Length = 545
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 103/163 (63%), Gaps = 12/163 (7%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + TE+ L+E+F+KYG + ++ + DPN+GRSRGF F+ F+ E +SV++V+ +
Sbjct: 163 GLNWETTEDGLREYFNKYGHVIDLKIMKDPNSGRSRGFGFLTFE-----EPSSVDEVV-K 216
Query: 166 GNHVINNKKIEAKKA-----KAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDK 220
H+++ K I+ K++ + K+GKIFVGG+ +++ +E + F+Q+G II+ ++ DK
Sbjct: 217 TQHILDGKVIDPKRSIPREEQDKTGKIFVGGIGADVRPKEFEEFFSQYGTIIDAQLMLDK 276
Query: 221 SKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ + F F+T++ V + +N K++++K+A P+
Sbjct: 277 DTGRSRGFGFVTYDSPEAVDRVCQNKYIDFKGKQIEIKRAEPR 319
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 52/80 (65%), Gaps = 1/80 (1%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+F+GGL+ E ++ ++ +F ++G++I+ ++ D + + + F F+TFE S V +++K
Sbjct: 158 KMFIGGLNWETTEDGLREYFNKYGHVIDLKIMKDPNSGRSRGFGFLTFEEPSSVDEVVKT 217
Query: 246 PKQKINDKEVDVKKATPKPE 265
+ ++ K +D K++ P+ E
Sbjct: 218 -QHILDGKVIDPKRSIPREE 236
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 32/41 (78%)
Query: 610 LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
L+E+F+KYG + ++ + DPN+GRSRGF F+ F++ S+++
Sbjct: 173 LREYFNKYGHVIDLKIMKDPNSGRSRGFGFLTFEEPSSVDE 213
Score = 43.1 bits (100), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 30/48 (62%)
Query: 603 VDKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D +E +E FS+YG I + L D +TGRSRGF F+ + E++++
Sbjct: 250 ADVRPKEFEEFFSQYGTIIDAQLMLDKDTGRSRGFGFVTYDSPEAVDR 297
>gi|389623913|ref|XP_003709610.1| hypothetical protein MGG_06881 [Magnaporthe oryzae 70-15]
gi|351649139|gb|EHA56998.1| hypothetical protein MGG_06881 [Magnaporthe oryzae 70-15]
Length = 568
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/150 (38%), Positives = 92/150 (61%), Gaps = 2/150 (1%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
E L+++FS++GE+ T+ D TGRSRGF F+ FKD +++ V++ +G +I+ K
Sbjct: 133 ESLRDYFSQFGEVIECTVMRDGTTGRSRGFGFLTFKDPKTVNIVMVKEHYLDG-KIIDPK 191
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
+ + + K+ KIFVGG+S E D+E K FAQFG +++ + DK + + F F+TF
Sbjct: 192 RAIPRDEQEKTSKIFVGGVSQETTDQEFKDFFAQFGRVVDATLMMDKDTGRPRGFGFVTF 251
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKATPK 263
E E+ V L +I+ K ++VKKA P+
Sbjct: 252 ESEAGVEACLAR-DLEIHGKLIEVKKAQPR 280
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 54/84 (64%), Gaps = 3/84 (3%)
Query: 183 KSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF-EHESVVID 241
+ GK+F+GGL+ E DE ++ +F+QFG +IE + D + + + F F+TF + ++V I
Sbjct: 117 EDGKMFIGGLNWETTDESLRDYFSQFGEVIECTVMRDGTTGRSRGFGFLTFKDPKTVNIV 176
Query: 242 LLKNPKQKINDKEVDVKKATPKPE 265
++K + ++ K +D K+A P+ E
Sbjct: 177 MVK--EHYLDGKIIDPKRAIPRDE 198
Score = 48.1 bits (113), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 34/51 (66%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYF 658
E L+++FS++GE+ T+ D TGRSRGF F+ FKD +++ V++ Y
Sbjct: 133 ESLRDYFSQFGEVIECTVMRDGTTGRSRGFGFLTFKDPKTVNIVMVKEHYL 183
Score = 42.7 bits (99), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 601 GIVDKIT-EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDV 656
G+ + T +E K+ F+++G + + TL D +TGR RGF F+ F+ +E D+
Sbjct: 209 GVSQETTDQEFKDFFAQFGRVVDATLMMDKDTGRPRGFGFVTFESEAGVEACLARDL 265
>gi|30682553|ref|NP_683559.2| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|11994764|dbj|BAB03120.1| unnamed protein product [Arabidopsis thaliana]
gi|19347908|gb|AAL85976.1| unknown protein [Arabidopsis thaliana]
gi|21689785|gb|AAM67536.1| unknown protein [Arabidopsis thaliana]
gi|62320244|dbj|BAD94504.1| hypothetical protein [Arabidopsis thaliana]
gi|332641794|gb|AEE75315.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 358
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 95/171 (55%), Gaps = 20/171 (11%)
Query: 107 GIVHKITEE--LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIA 164
G +HK T +HF KYGEI + + D +TG+ RGF FI F D SV D +
Sbjct: 24 GGLHKDTTNTVFNKHFGKYGEITDSVIMRDRHTGQPRGFGFITFAD------PSVVDKVI 77
Query: 165 EGNHVINNKKIEAKKA-----------KAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIE 213
E HVIN K++E K+ K+ KIFVGG+ + ++E+K FA++GN++E
Sbjct: 78 EDTHVINGKQVEIKRTIPKGAGGNQSKDIKTKKIFVGGIPSTVTEDELKDFFAKYGNVVE 137
Query: 214 TEMPYDKSKSQRKNFCFITFEHESVVIDLL-KNPKQKINDKEVDVKKATPK 263
++ D ++ + F F+ F+ E VV +LL K + D +V++KKA PK
Sbjct: 138 HQVIRDHETNRSRGFGFVIFDSEEVVDELLSKGNMIDMADTQVEIKKAEPK 188
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Query: 182 AKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVID 241
A GKIF+GGL + + HF ++G I ++ + D+ Q + F FITF SVV
Sbjct: 16 ASPGKIFIGGLHKDTTNTVFNKHFGKYGEITDSVIMRDRHTGQPRGFGFITFADPSVVDK 75
Query: 242 LLKNPKQKINDKEVDVKKATPK 263
++++ IN K+V++K+ PK
Sbjct: 76 VIED-THVINGKQVEIKRTIPK 96
Score = 44.7 bits (104), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVY 657
D +HF KYGEI + + D +TG+ RGF FI F D ++K +ED +
Sbjct: 29 DTTNTVFNKHFGKYGEITDSVIMRDRHTGQPRGFGFITFADPSVVDKV-IEDTH 81
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 591 EAKNKMVSHPGIVDKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLE 649
+ K K + GI +TE ELK+ F+KYG + + D T RSRGF F++F E ++
Sbjct: 105 DIKTKKIFVGGIPSTVTEDELKDFFAKYGNVVEHQVIRDHETNRSRGFGFVIFDSEEVVD 164
Query: 650 K 650
+
Sbjct: 165 E 165
>gi|170060137|ref|XP_001865670.1| heterogeneous nuclear ribonucleoprotein 27C [Culex
quinquefasciatus]
gi|167878677|gb|EDS42060.1| heterogeneous nuclear ribonucleoprotein 27C [Culex
quinquefasciatus]
Length = 402
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 98/168 (58%), Gaps = 16/168 (9%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + T+E L+ +F +YGE+ + + + TGRSRGF F+ F D E++E+A +
Sbjct: 25 GLSWETTQENLQRYFGRYGEVIDCVVMKNNETGRSRGFGFVTFADPENVERA-----LEN 79
Query: 166 GNHVINNKKIEAKKAKAKS----------GKIFVGGLSPEMKDEEIKAHFAQFGNIIETE 215
G H ++ + I+ K +S K+F+GGL P + + ++++ F+++GN++E
Sbjct: 80 GPHTLDGRTIDPKPCNPRSLHKPKRTGGYPKVFLGGLPPNITETDLRSFFSRYGNVMEVV 139
Query: 216 MPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ YD+ K + + F F++FE+E+ V I+ K+V++KKA P+
Sbjct: 140 IMYDQEKKKSRGFGFLSFENEAAVERATAEHFVNISGKQVEIKKAEPR 187
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 42/79 (53%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GK+FVGGLS E E ++ +F ++G +I+ + + + + F F+TF V L+
Sbjct: 19 GKLFVGGLSWETTQENLQRYFGRYGEVIDCVVMKNNETGRSRGFGFVTFADPENVERALE 78
Query: 245 NPKQKINDKEVDVKKATPK 263
N ++ + +D K P+
Sbjct: 79 NGPHTLDGRTIDPKPCNPR 97
Score = 48.1 bits (113), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 31/48 (64%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
+ E L+ +F +YGE+ + + + TGRSRGF F+ F D E++E+A
Sbjct: 29 ETTQENLQRYFGRYGEVIDCVVMKNNETGRSRGFGFVTFADPENVERA 76
Score = 43.1 bits (100), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 601 GIVDKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVE 654
G+ ITE +L+ FS+YG + V + D +SRGF F+ F++ ++E+A+ E
Sbjct: 115 GLPPNITETDLRSFFSRYGNVMEVVIMYDQEKKKSRGFGFLSFENEAAVERATAE 169
>gi|169613076|ref|XP_001799955.1| hypothetical protein SNOG_09668 [Phaeosphaeria nodorum SN15]
gi|160702644|gb|EAT82933.2| hypothetical protein SNOG_09668 [Phaeosphaeria nodorum SN15]
Length = 453
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 90/150 (60%), Gaps = 2/150 (1%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
E LK++FS++GE+ T+ D TGRSRGF F+ F+D + + V++ +G +I+ K
Sbjct: 40 ESLKDYFSQFGEVSECTVMRDSATGRSRGFGFLTFRDPKCVNTVMVKEHYLDG-KIIDPK 98
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
+ ++ + ++ KIFVGG+S E +E+ F FG +++ + DK + + F F+TF
Sbjct: 99 RAIPREEQERTSKIFVGGVSQEATEEDFTNFFKSFGRVVDATLMMDKETGRPRGFGFVTF 158
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ ++ V L+ P Q I K ++VK+A P+
Sbjct: 159 DGDAAVDATLRQPLQ-ILGKPIEVKRAQPR 187
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 33/51 (64%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYF 658
E LK++FS++GE+ T+ D TGRSRGF F+ F+D + + V++ Y
Sbjct: 40 ESLKDYFSQFGEVSECTVMRDSATGRSRGFGFLTFRDPKCVNTVMVKEHYL 90
>gi|354547999|emb|CCE44734.1| hypothetical protein CPAR2_405380 [Candida parapsilosis]
Length = 513
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/163 (35%), Positives = 94/163 (57%), Gaps = 12/163 (7%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ TEE L +FSK+GEI + T+ D TGRSRGF F+ FKD ++ DV+ +
Sbjct: 199 GLNWDTTEEGLVNYFSKFGEITDYTIMKDNATGRSRGFGFLTFKDPSAV------DVVIK 252
Query: 166 GNHVINNKKIEAKKA-----KAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDK 220
+H+++ K I+ K+A + + GKIF+GG+ P + + E F++FG II+ ++ DK
Sbjct: 253 QDHILDGKLIDPKRAISREDQDRVGKIFIGGIDPMVSEGEFNEFFSKFGTIIDCQLMIDK 312
Query: 221 SKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ + F FITF+ V + N + K ++VK+A P+
Sbjct: 313 DTGRSRGFGFITFDSPDAVDRVCVNKYLTLKGKAMEVKRAAPR 355
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 30/46 (65%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLE 649
D E L +FSK+GEI + T+ D TGRSRGF F+ FKD +++
Sbjct: 203 DTTEEGLVNYFSKFGEITDYTIMKDNATGRSRGFGFLTFKDPSAVD 248
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Query: 601 GIVDKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASV 653
GI ++E E E FSK+G I + L D +TGRSRGF FI F +++++ V
Sbjct: 283 GIDPMVSEGEFNEFFSKFGTIIDCQLMIDKDTGRSRGFGFITFDSPDAVDRVCV 336
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
Query: 183 KSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDL 242
+SGK+F+GGL+ + +E + +F++FG I + + D + + + F F+TF+ S V +
Sbjct: 191 ESGKMFIGGLNWDTTEEGLVNYFSKFGEITDYTIMKDNATGRSRGFGFLTFKDPSAVDVV 250
Query: 243 LKNPKQKINDKEVDVKKA 260
+K ++ K +D K+A
Sbjct: 251 IKQ-DHILDGKLIDPKRA 267
>gi|307940740|gb|ADN95984.1| G-strand specific single-stranded telomere-binding protein 2
[Nicotiana tabacum]
Length = 337
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/205 (35%), Positives = 111/205 (54%), Gaps = 18/205 (8%)
Query: 107 GIVHKIT-EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + T E+ ++F KYGEI + + D +TGR RGF FI ++D + V+ VIAE
Sbjct: 21 GLAKETTLEQFVKYFEKYGEIIDSVIMKDRHTGRPRGFGFITYEDP-----SVVDTVIAE 75
Query: 166 GNHVINNKKIEAKKA---------KAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEM 216
NH+IN+K++E K+ K+ KIFVGG+ M ++E K F++FG + E E+
Sbjct: 76 -NHIINDKQVEIKRTIPKGSAESKDFKTKKIFVGGIPTTMTEDEFKNFFSKFGKVTEYEI 134
Query: 217 PYDKSKSQRKNFCFITFEHESVVIDLL-KNPKQKINDKEVDVKKATPKPEPFGVRGGRGG 275
D + + F FI F++E VV +LL + + + +V++KKA PK G
Sbjct: 135 IRDHVSKRSRGFGFIVFDNEQVVDNLLAEGNRTDMMGTQVEIKKAEPKKPSNPASAPAYG 194
Query: 276 RGGRGGRGGRMAGGYG-GYGGYGGG 299
RG G GG+G Y G+G G
Sbjct: 195 SDSRGRGYGDSYGGFGNSYSGFGSG 219
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 182 AKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVID 241
A GKIF+GGL+ E E+ +F ++G II++ + D+ + + F FIT+E SVV D
Sbjct: 12 ASPGKIFIGGLAKETTLEQFVKYFEKYGEIIDSVIMKDRHTGRPRGFGFITYEDPSVV-D 70
Query: 242 LLKNPKQKINDKEVDVKKATPK 263
+ INDK+V++K+ PK
Sbjct: 71 TVIAENHIINDKQVEIKRTIPK 92
Score = 40.8 bits (94), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 29/48 (60%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVED 655
E+ ++F KYGEI + + D +TGR RGF FI ++D ++ E+
Sbjct: 29 EQFVKYFEKYGEIIDSVIMKDRHTGRPRGFGFITYEDPSVVDTVIAEN 76
Score = 40.0 bits (92), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 497
EII++ + D+ + + F FIT+E SVV D + INDK+V++K+ PK
Sbjct: 40 EIIDSVIMKDRHTGRPRGFGFITYEDPSVV-DTVIAENHIINDKQVEIKRTIPK 92
>gi|15220810|ref|NP_173208.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332191496|gb|AEE29617.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 369
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/164 (34%), Positives = 95/164 (57%), Gaps = 19/164 (11%)
Query: 113 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINN 172
E +F K+GE+ + + +D TG RGF F+ F D+ EK + E +HVI++
Sbjct: 79 AETFANYFGKFGEVVDSVIMTDRITGNPRGFGFVTFADSAVAEK------VLEEDHVIDD 132
Query: 173 KKIEAK------------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDK 220
+K++ K KA +K+ KIFVGGL P ++++E+K +F +G+IIE ++ YD
Sbjct: 133 RKVDLKRTLPRGDKDTDIKAVSKTRKIFVGGLPPLLEEDELKNYFCVYGDIIEHQIMYDH 192
Query: 221 SKSQRKNFCFITFEHESVVIDLLKNPK-QKINDKEVDVKKATPK 263
+ + F F+TF+ E V L + K ++ DK+V++K+A PK
Sbjct: 193 HTGRSRGFGFVTFQTEDSVDRLFSDGKVHELGDKQVEIKRAEPK 236
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GK+FVGG+S E E +F +FG ++++ + D+ + F F+TF +S V + +
Sbjct: 66 GKLFVGGVSWETTAETFANYFGKFGEVVDSVIMTDRITGNPRGFGFVTFA-DSAVAEKVL 124
Query: 245 NPKQKINDKEVDVKKATPK 263
I+D++VD+K+ P+
Sbjct: 125 EEDHVIDDRKVDLKRTLPR 143
Score = 42.4 bits (98), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 58/119 (48%), Gaps = 9/119 (7%)
Query: 387 VADNLLLCDNFPSIRELEIPEAFL--TKTTTVPMTTTEHMVLVTGTDMMHMEVTE----- 439
VA+ +L D+ R++++ K T + + + V G + +E E
Sbjct: 119 VAEKVLEEDHVIDDRKVDLKRTLPRGDKDTDIKAVSKTRKIFVGGLPPL-LEEDELKNYF 177
Query: 440 AVPMEIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPK-QKINDKEVDVKKATPK 497
V +IIE ++ YD + + F F+TF+ E V L + K ++ DK+V++K+A PK
Sbjct: 178 CVYGDIIEHQIMYDHHTGRSRGFGFVTFQTEDSVDRLFSDGKVHELGDKQVEIKRAEPK 236
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 29/43 (67%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+ELK +F YG+I + D +TGRSRGF F+ F+ +S+++
Sbjct: 171 DELKNYFCVYGDIIEHQIMYDHHTGRSRGFGFVTFQTEDSVDR 213
Score = 38.9 bits (89), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 26/49 (53%)
Query: 607 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVED 655
E +F K+GE+ + + +D TG RGF F+ F D+ EK ED
Sbjct: 79 AETFANYFGKFGEVVDSVIMTDRITGNPRGFGFVTFADSAVAEKVLEED 127
>gi|414868392|tpg|DAA46949.1| TPA: hypothetical protein ZEAMMB73_935024 [Zea mays]
Length = 348
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/159 (38%), Positives = 86/159 (54%), Gaps = 17/159 (10%)
Query: 116 LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNKKI 175
KEHF KYG+I + + D T + RGF FI F D +V D + E HVIN K +
Sbjct: 30 FKEHFGKYGDIIDAVIMKDRYTQKPRGFGFITFADP------TVVDRVIEDEHVINGKPV 83
Query: 176 EAKKAKAKSG---------KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRK 226
E K+ K KIFVGGL +K++E K F++FG ++E E+ D + ++ +
Sbjct: 84 EIKRTIPKGAAPLKDFKTKKIFVGGLPSALKEDEFKEFFSKFGKVVEHEIIRDHATNRSR 143
Query: 227 NFCFITFEHESVVIDLL--KNPKQKINDKEVDVKKATPK 263
F FI F+ E V DLL K +N +V++KKA PK
Sbjct: 144 GFGFIVFDAEKAVDDLLHKKGNMIDLNGSQVEIKKAEPK 182
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 182 AKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVID 241
A KIF+GGLS + K HF ++G+II+ + D+ + + F FITF +VV
Sbjct: 11 ASPAKIFIGGLSKDTSMSTFKEHFGKYGDIIDAVIMKDRYTQKPRGFGFITFADPTVVDR 70
Query: 242 LLKNPKQKINDKEVDVKKATPK 263
++++ + IN K V++K+ PK
Sbjct: 71 VIED-EHVINGKPVEIKRTIPK 91
Score = 46.6 bits (109), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 45/72 (62%), Gaps = 7/72 (9%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVI-AEGNHV-IN 171
+E KE FSK+G++ + D T RSRGF FIVF EKA V+D++ +GN + +N
Sbjct: 116 DEFKEFFSKFGKVVEHEIIRDHATNRSRGFGFIVF----DAEKA-VDDLLHKKGNMIDLN 170
Query: 172 NKKIEAKKAKAK 183
++E KKA+ K
Sbjct: 171 GSQVEIKKAEPK 182
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVED 655
D KEHF KYG+I + + D T + RGF FI F D +++ +ED
Sbjct: 24 DTSMSTFKEHFGKYGDIIDAVIMKDRYTQKPRGFGFITFADPTVVDRV-IED 74
>gi|449443534|ref|XP_004139532.1| PREDICTED: uncharacterized protein LOC101217028 [Cucumis sativus]
gi|449505564|ref|XP_004162509.1| PREDICTED: uncharacterized LOC101217028 [Cucumis sativus]
Length = 477
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 90/171 (52%), Gaps = 27/171 (15%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+ L+E+F +GE+ V + D TGR+RGF F+VF D + + +E HVI+ +
Sbjct: 18 DRLREYFRNFGEVVEVMIMRDRATGRARGFGFVVFADPVAAARVVLEK------HVIDGR 71
Query: 174 KIEAKKA---------------------KAKSGKIFVGGLSPEMKDEEIKAHFAQFGNII 212
+EAKKA ++ KIFVGGL+ + + + K +F QFG I+
Sbjct: 72 TVEAKKAVPRDDQNILSRNNTGILGSPGPTRTKKIFVGGLASTVTESDFKKYFDQFGTIV 131
Query: 213 ETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ + YD + + + F FIT+E E V +L ++N K V+VK+A PK
Sbjct: 132 DVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAVPK 182
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GK+F+GG+S + ++ ++ +F FG ++E + D++ + + F F+ F + V +
Sbjct: 4 GKLFIGGISWDTDEDRLREYFRNFGEVVEVMIMRDRATGRARGFGFVVFA-DPVAAARVV 62
Query: 245 NPKQKINDKEVDVKKATPK 263
K I+ + V+ KKA P+
Sbjct: 63 LEKHVIDGRTVEAKKAVPR 81
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVE 654
D + L+E+F +GE+ V + D TGR+RGF F+VF D + + +E
Sbjct: 14 DTDEDRLREYFRNFGEVVEVMIMRDRATGRARGFGFVVFADPVAAARVVLE 64
Score = 44.7 bits (104), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 601 GIVDKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
G+ +TE + K++F ++G I +V + D NT R RGF FI ++ ES+EK
Sbjct: 110 GLASTVTESDFKKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEESVEK 160
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 31/53 (58%)
Query: 445 IIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 497
I++ + YD + + + F FIT+E E V +L ++N K V+VK+A PK
Sbjct: 130 IVDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAVPK 182
>gi|355564741|gb|EHH21241.1| hypothetical protein EGK_04258 [Macaca mulatta]
Length = 324
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 97/177 (54%), Gaps = 25/177 (14%)
Query: 107 GIVHKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEG 166
G V + E L+E+F ++GE++ + DP T RSRGF F+ F D +A V+ V+A+
Sbjct: 8 GHVLALVEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMD-----QAGVDKVLAQS 62
Query: 167 NHVINNKKIEAK---------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMP 217
H +++K I+ K K ++ KIFVGGLS E++K +F QFG + + +
Sbjct: 63 RHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLM 122
Query: 218 YDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDK-----------EVDVKKATPK 263
+DK+ ++ + F F+TFE E +V + + +IN+K V+ KKA PK
Sbjct: 123 FDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVRWDRVQWLTPVECKKAQPK 179
Score = 46.6 bits (109), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 31/50 (62%)
Query: 601 GIVDKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
G V + E L+E+F ++GE++ + DP T RSRGF F+ F D ++K
Sbjct: 8 GHVLALVEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDK 57
Score = 43.1 bits (100), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 37/57 (64%), Gaps = 2/57 (3%)
Query: 603 VDKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFY 659
V+ E++K++F ++G++++ L D T R RGF F+ F+ + +EK V +++F+
Sbjct: 99 VNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEK--VCEIHFH 153
>gi|218199915|gb|EEC82342.1| hypothetical protein OsI_26646 [Oryza sativa Indica Group]
Length = 472
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/190 (32%), Positives = 99/190 (52%), Gaps = 28/190 (14%)
Query: 96 MEAKNKMVSHPGIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESL 154
MEA + + GI + E+ L+E+F ++GE+ + D NTGR+RGF F+VF D
Sbjct: 1 MEADSGKLFVGGISWETDEDRLREYFGRFGEVTEAVIMRDRNTGRARGFGFVVFTDAGVA 60
Query: 155 EKASVEDVIAEGNHVINNKKIEAKKA---------------------KAKSGKIFVGGLS 193
E+ +++ H+I+ + +EAKKA ++ KIFVGGL+
Sbjct: 61 ERVTMDK------HMIDGRMVEAKKAVPRDDQSITSKNNGSSIGSPGPGRTRKIFVGGLA 114
Query: 194 PEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDK 253
+ + E + +F QFG I + + YD + + + F FIT++ E V L ++N K
Sbjct: 115 SNVTEVEFRRYFEQFGVITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALHKNFHELNGK 174
Query: 254 EVDVKKATPK 263
V+VK+A PK
Sbjct: 175 MVEVKRAVPK 184
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 31/47 (65%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVE 654
+ L+E+F ++GE+ + D NTGR+RGF F+VF D E+ +++
Sbjct: 20 DRLREYFGRFGEVTEAVIMRDRNTGRARGFGFVVFTDAGVAERVTMD 66
Score = 42.4 bits (98), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 601 GIVDKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
G+ +TE E + +F ++G I +V + D NT R RGF FI + ++++KA
Sbjct: 112 GLASNVTEVEFRRYFEQFGVITDVVVMYDHNTQRPRGFGFITYDSEDAVDKA 163
>gi|255560757|ref|XP_002521392.1| Heterogeneous nuclear ribonucleoprotein A1, putative [Ricinus
communis]
gi|223539470|gb|EEF41060.1| Heterogeneous nuclear ribonucleoprotein A1, putative [Ricinus
communis]
Length = 412
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/211 (33%), Positives = 110/211 (52%), Gaps = 24/211 (11%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
GI + TEE +FSK+GEI + + D ++GR RGF F+ F D + ++ ED
Sbjct: 85 GISWETTEETFTSYFSKFGEITDSVIMRDRHSGRPRGFGFVTFADLAAADRVLEED---- 140
Query: 166 GNHVINNKKIEAK----------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETE 215
H+I+++ +E K K ++ KIFVGG+ P + ++E+ +F+ +GNI+E +
Sbjct: 141 --HIIDDRAVEVKRTVPREEMEVKGVVRARKIFVGGIPPTLTEDELGEYFSVYGNIVEHQ 198
Query: 216 MPYDKSKSQRKNFCFITFEHESVVIDLLKNPK-QKINDKEVDVKKATPKPEPFGVRGGRG 274
+ D + + F F+TFE E V + + ++ K V++KKA PK GG
Sbjct: 199 IMLDHKTGRSRGFGFVTFETEDSVEQIFSTGRTHELGGKRVEIKKAVPKRN-----GGDY 253
Query: 275 GRGGRGGRG-GRMAGGYGGYGGYGGGYGGIL 304
G G+ G AGGYG GG YGG +
Sbjct: 254 GSSGKYHTGFSNGAGGYGAGHNSGGLYGGKM 284
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 52/94 (55%), Gaps = 1/94 (1%)
Query: 172 NKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFI 231
N+ + + + GK+FVGG+S E +E ++F++FG I ++ + D+ + + F F+
Sbjct: 66 NQTRDNSSSDSSQGKLFVGGISWETTEETFTSYFSKFGEITDSVIMRDRHSGRPRGFGFV 125
Query: 232 TFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE 265
TF + D + I+D+ V+VK+ P+ E
Sbjct: 126 TFA-DLAAADRVLEEDHIIDDRAVEVKRTVPREE 158
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 37/63 (58%), Gaps = 3/63 (4%)
Query: 589 IVEAKNKMVSHPGIVDKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTES 647
+V A+ V GI +TE EL E+FS YG I + D TGRSRGF F+ F+ +S
Sbjct: 164 VVRARKIFVG--GIPPTLTEDELGEYFSVYGNIVEHQIMLDHKTGRSRGFGFVTFETEDS 221
Query: 648 LEK 650
+E+
Sbjct: 222 VEQ 224
Score = 43.5 bits (101), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVED 655
GI + TEE +FSK+GEI + + D ++GR RGF F+ F D + ++ ED
Sbjct: 85 GISWETTEETFTSYFSKFGEITDSVIMRDRHSGRPRGFGFVTFADLAAADRVLEED 140
Score = 42.4 bits (98), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 64/154 (41%), Gaps = 17/154 (11%)
Query: 387 VADNLLLCDNFPSIRELEIPEAFLTKTTTVPMTTTEHMVLVTGT--DMMHMEVTE--AVP 442
AD +L D+ R +E+ + V + V G + E+ E +V
Sbjct: 132 AADRVLEEDHIIDDRAVEVKRTVPREEMEVKGVVRARKIFVGGIPPTLTEDELGEYFSVY 191
Query: 443 MEIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPK-QKINDKEVDVKKATPKPEPF 501
I+E ++ D + + F F+TFE E V + + ++ K V++KKA PK
Sbjct: 192 GNIVEHQIMLDHKTGRSRGFGFVTFETEDSVEQIFSTGRTHELGGKRVEIKKAVPKRN-- 249
Query: 502 GVRGGRGGRGGRGGRGGRMAGGYG-GYGGYGGGY 534
GG G G+ G+ G GGYG G+
Sbjct: 250 ---------GGDYGSSGKYHTGFSNGAGGYGAGH 274
>gi|414887335|tpg|DAA63349.1| TPA: hypothetical protein ZEAMMB73_769138 [Zea mays]
Length = 342
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 100/191 (52%), Gaps = 27/191 (14%)
Query: 96 MEAKNKMVSHPGIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESL 154
MEA + + GI + E+ L+ +F ++GE+ + D NTGR+RGF F+VF D+
Sbjct: 1 MEADSGKLFVGGISWETDEDRLRAYFGRFGEVTEAVIMRDRNTGRARGFGFVVFADSGIA 60
Query: 155 EKASVEDVIAEGNHVINNKKIEAKKA--------------------KAKSGKIFVGGLSP 194
E+ +++ H+I+ + +EAKKA ++ KIFVGGL+
Sbjct: 61 ERVTLDK------HMIDGRMVEAKKAVPRDDQSIASKNNSSIGSPGPGRTRKIFVGGLAS 114
Query: 195 EMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKE 254
+ + E + +F QFG I + + YD + + + F FIT++ E V L ++N K
Sbjct: 115 NVTEVEFRRYFEQFGVITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALHKNFHELNGKM 174
Query: 255 VDVKKATPKPE 265
V+VK+A PK +
Sbjct: 175 VEVKRAVPKEQ 185
Score = 47.4 bits (111), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 31/47 (65%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVE 654
+ L+ +F ++GE+ + D NTGR+RGF F+VF D+ E+ +++
Sbjct: 20 DRLRAYFGRFGEVTEAVIMRDRNTGRARGFGFVVFADSGIAERVTLD 66
Score = 42.7 bits (99), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 601 GIVDKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
G+ +TE E + +F ++G I +V + D NT R RGF FI + ++++KA
Sbjct: 111 GLASNVTEVEFRRYFEQFGVITDVVVMYDHNTQRPRGFGFITYDSEDAVDKA 162
>gi|102140031|gb|ABF70162.1| RNA-binding protein, putative [Musa acuminata]
Length = 465
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 92/176 (52%), Gaps = 29/176 (16%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+ L+++FS +GE+ + D TGR+RGF F+VF D A E V+ E H I+ +
Sbjct: 20 DSLRKYFSAFGEVVEAVIMKDRTTGRARGFGFVVFAD-----PAVTERVVTE-KHTIDGR 73
Query: 174 KIEAKKAKAK----------------------SGKIFVGGLSPEMKDEEIKAHFAQFGNI 211
+EAKKA + + KIFVGGLS + + + K +F QFG I
Sbjct: 74 MVEAKKAVPRDDHQFLNKNSSSSIHGSPVPGHTKKIFVGGLSSTITEGDFKKYFDQFGTI 133
Query: 212 IETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK-PEP 266
+ + YD + + + F FIT++ E V +L N ++N K V+VK+A PK P P
Sbjct: 134 TDVVVMYDHNTQRPRGFGFITYDSEDAVDKVLLNAFHELNGKMVEVKRAVPKEPSP 189
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GK+F+GG+S + ++ ++ +F+ FG ++E + D++ + + F F+ F + V + +
Sbjct: 6 GKLFIGGISWDTNEDSLRKYFSAFGEVVEAVIMKDRTTGRARGFGFVVFA-DPAVTERVV 64
Query: 245 NPKQKINDKEVDVKKATPKPE 265
K I+ + V+ KKA P+ +
Sbjct: 65 TEKHTIDGRMVEAKKAVPRDD 85
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 29/51 (56%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVE 654
D + L+++FS +GE+ + D TGR+RGF F+VF D E+ E
Sbjct: 16 DTNEDSLRKYFSAFGEVVEAVIMKDRTTGRARGFGFVVFADPAVTERVVTE 66
Score = 42.4 bits (98), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 445 IIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK-PEP 500
I + + YD + + + F FIT++ E V +L N ++N K V+VK+A PK P P
Sbjct: 133 ITDVVVMYDHNTQRPRGFGFITYDSEDAVDKVLLNAFHELNGKMVEVKRAVPKEPSP 189
>gi|448098292|ref|XP_004198889.1| Piso0_002282 [Millerozyma farinosa CBS 7064]
gi|359380311|emb|CCE82552.1| Piso0_002282 [Millerozyma farinosa CBS 7064]
Length = 485
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 110/204 (53%), Gaps = 11/204 (5%)
Query: 116 LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNKKI 175
L ++F+++GE+ + T+ D TG+SRGF F+ FKD +S+E+ D I +G +I+ K+
Sbjct: 177 LVDYFTQFGEVVDYTIMRDNATGKSRGFGFLTFKDPKSVEEVIKRDHILDG-KLIDPKRA 235
Query: 176 EAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEH 235
A++ + K GKIFVGG+ P + ++E F+QFG+II+ ++ DK + + F FIT++
Sbjct: 236 IAREEQDKVGKIFVGGIDPMVNEKEFHDFFSQFGSIIDAQLMIDKDTGRSRGFGFITYDS 295
Query: 236 ESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGVRGGRGGRGGRGGRGGRMAGGYGGYGG 295
V + N + K ++VK+A P RG + + YG
Sbjct: 296 PDAVDRVTVNKYLTLKGKSMEVKRAEP----------RGQHQQNQLQQQQQQQQQYNYGM 345
Query: 296 YGGGYGGILYKPLLFYELNELGIS 319
YG YG + Y+ + Y + G+S
Sbjct: 346 YGNQYGQMPYQGMAAYGQSMNGMS 369
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 34/52 (65%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVED 655
D + L ++F+++GE+ + T+ D TG+SRGF F+ FKD +S+E+ D
Sbjct: 171 DTSEQGLVDYFTQFGEVVDYTIMRDNATGKSRGFGFLTFKDPKSVEEVIKRD 222
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 43/78 (55%), Gaps = 6/78 (7%)
Query: 107 GIVHKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
GI + E E + FS++G I + L D +TGRSRGF FI + +++++ +V +
Sbjct: 251 GIDPMVNEKEFHDFFSQFGSIIDAQLMIDKDTGRSRGFGFITYDSPDAVDRVTVNKYL-- 308
Query: 166 GNHVINNKKIEAKKAKAK 183
+ K +E K+A+ +
Sbjct: 309 ---TLKGKSMEVKRAEPR 323
Score = 43.5 bits (101), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GK+F+GGL+ + ++ + +F QFG +++ + D + + + F F+TF+ V +++K
Sbjct: 161 GKMFIGGLNWDTSEQGLVDYFTQFGEVVDYTIMRDNATGKSRGFGFLTFKDPKSVEEVIK 220
Query: 245 NPKQKINDKEVDVKKATPKPE 265
++ K +D K+A + E
Sbjct: 221 R-DHILDGKLIDPKRAIAREE 240
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Query: 601 GIVDKITEELKEH--FSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASV 653
G +D + E + H FS++G I + L D +TGRSRGF FI + +++++ +V
Sbjct: 250 GGIDPMVNEKEFHDFFSQFGSIIDAQLMIDKDTGRSRGFGFITYDSPDAVDRVTV 304
>gi|448102174|ref|XP_004199739.1| Piso0_002282 [Millerozyma farinosa CBS 7064]
gi|359381161|emb|CCE81620.1| Piso0_002282 [Millerozyma farinosa CBS 7064]
Length = 485
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 54/148 (36%), Positives = 92/148 (62%), Gaps = 1/148 (0%)
Query: 116 LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNKKI 175
L ++FS++GE+ + T+ D TG+SRGF F+ FKD +S+E+ D I +G +I+ K+
Sbjct: 177 LVDYFSQFGEVVDYTIMRDNATGKSRGFGFLTFKDPKSVEEVIKRDHILDG-KLIDPKRA 235
Query: 176 EAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEH 235
A++ + K GKIFVGG+ P + ++E F+QFG+II+ ++ DK + + F FIT++
Sbjct: 236 IAREEQDKVGKIFVGGIDPMVNEKEFHDFFSQFGSIIDAQLMIDKDTGRSRGFGFITYDS 295
Query: 236 ESVVIDLLKNPKQKINDKEVDVKKATPK 263
V + N + K ++VK+A P+
Sbjct: 296 PDAVDRVTVNKYLTLKGKSMEVKRAEPR 323
Score = 46.2 bits (108), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 34/52 (65%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVED 655
D + L ++FS++GE+ + T+ D TG+SRGF F+ FKD +S+E+ D
Sbjct: 171 DTSEQGLVDYFSQFGEVVDYTIMRDNATGKSRGFGFLTFKDPKSVEEVIKRD 222
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 43/78 (55%), Gaps = 6/78 (7%)
Query: 107 GIVHKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
GI + E E + FS++G I + L D +TGRSRGF FI + +++++ +V +
Sbjct: 251 GIDPMVNEKEFHDFFSQFGSIIDAQLMIDKDTGRSRGFGFITYDSPDAVDRVTVNKYL-- 308
Query: 166 GNHVINNKKIEAKKAKAK 183
+ K +E K+A+ +
Sbjct: 309 ---TLKGKSMEVKRAEPR 323
Score = 43.9 bits (102), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GK+F+GGL+ + ++ + +F+QFG +++ + D + + + F F+TF+ V +++K
Sbjct: 161 GKMFIGGLNWDTSEQGLVDYFSQFGEVVDYTIMRDNATGKSRGFGFLTFKDPKSVEEVIK 220
Query: 245 NPKQKINDKEVDVKKATPKPE 265
++ K +D K+A + E
Sbjct: 221 R-DHILDGKLIDPKRAIAREE 240
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Query: 601 GIVDKITEELKEH--FSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASV 653
G +D + E + H FS++G I + L D +TGRSRGF FI + +++++ +V
Sbjct: 250 GGIDPMVNEKEFHDFFSQFGSIIDAQLMIDKDTGRSRGFGFITYDSPDAVDRVTV 304
>gi|242053621|ref|XP_002455956.1| hypothetical protein SORBIDRAFT_03g027920 [Sorghum bicolor]
gi|241927931|gb|EES01076.1| hypothetical protein SORBIDRAFT_03g027920 [Sorghum bicolor]
Length = 349
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/159 (38%), Positives = 85/159 (53%), Gaps = 17/159 (10%)
Query: 116 LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNKKI 175
KEHF KYG+I + + D T + RGF FI F D +V D + E HVIN K +
Sbjct: 30 FKEHFGKYGDIIDAVIMKDRYTQKPRGFGFITFADP------AVVDRVIEDEHVINGKLV 83
Query: 176 EAKKAKAKSG---------KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRK 226
E K+ K KIFVGGL +K++E K F++FG ++E E+ D + ++ +
Sbjct: 84 EIKRTIPKGAAPLKDFKTKKIFVGGLPSALKEDEFKEFFSKFGKVVEHEIIRDHTTNRSR 143
Query: 227 NFCFITFEHESVVIDLLKNPKQKI--NDKEVDVKKATPK 263
F FI F+ E V DLL I N +V++KKA PK
Sbjct: 144 GFGFIVFDAEKTVDDLLAKKGNMIDLNGSQVEIKKAEPK 182
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 182 AKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVID 241
A KIF+GGLS + K HF ++G+II+ + D+ + + F FITF +VV
Sbjct: 11 ASPAKIFIGGLSKDTSMSTFKEHFGKYGDIIDAVIMKDRYTQKPRGFGFITFADPAVVDR 70
Query: 242 LLKNPKQKINDKEVDVKKATPK 263
++++ + IN K V++K+ PK
Sbjct: 71 VIED-EHVINGKLVEIKRTIPK 91
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 46/72 (63%), Gaps = 7/72 (9%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIA-EGNHV-IN 171
+E KE FSK+G++ + D T RSRGF FIVF D E +V+D++A +GN + +N
Sbjct: 116 DEFKEFFSKFGKVVEHEIIRDHTTNRSRGFGFIVF-DAEK----TVDDLLAKKGNMIDLN 170
Query: 172 NKKIEAKKAKAK 183
++E KKA+ K
Sbjct: 171 GSQVEIKKAEPK 182
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVED 655
D KEHF KYG+I + + D T + RGF FI F D +++ +ED
Sbjct: 24 DTSMSTFKEHFGKYGDIIDAVIMKDRYTQKPRGFGFITFADPAVVDRV-IED 74
Score = 38.9 bits (89), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKI--NDKEVDVKKATPK 497
+++E E+ D + ++ + F FI F+ E V DLL I N +V++KKA PK
Sbjct: 127 KVVEHEIIRDHTTNRSRGFGFIVFDAEKTVDDLLAKKGNMIDLNGSQVEIKKAEPK 182
Score = 38.9 bits (89), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 27/42 (64%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLE 649
+E KE FSK+G++ + D T RSRGF FIVF ++++
Sbjct: 116 DEFKEFFSKFGKVVEHEIIRDHTTNRSRGFGFIVFDAEKTVD 157
>gi|195624752|gb|ACG34206.1| RNA-binding protein [Zea mays]
Length = 469
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 90/173 (52%), Gaps = 27/173 (15%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+ L+E+F ++GE+ + D +TGR+RGF F+VF D E+ ++E H+I+ +
Sbjct: 22 DRLREYFGRFGEVTEAVIMRDRSTGRARGFGFVVFADATVAERVTIEK------HMIDGR 75
Query: 174 KIEAKKA---------------------KAKSGKIFVGGLSPEMKDEEIKAHFAQFGNII 212
+EAKKA ++ KIFVGGL + + + + +F QFG I
Sbjct: 76 MVEAKKAVPRDDHSIVSKSNTSSIGSPGPGRTRKIFVGGLPSNVTEADFRGYFEQFGVIT 135
Query: 213 ETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE 265
+ + YD + + + F FIT++ E V L ++N K V+VKKA PK +
Sbjct: 136 DVVVMYDHNTQRPRGFGFITYDSEDAVDKALHKSFHELNGKMVEVKKAVPKEQ 188
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Query: 184 SGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLL 243
SGK+FVGG+S E ++ ++ +F +FG + E + D+S + + F F+ F ++ V + +
Sbjct: 7 SGKLFVGGISWETDEDRLREYFGRFGEVTEAVIMRDRSTGRARGFGFVVFA-DATVAERV 65
Query: 244 KNPKQKINDKEVDVKKATPK 263
K I+ + V+ KKA P+
Sbjct: 66 TIEKHMIDGRMVEAKKAVPR 85
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 31/47 (65%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVE 654
+ L+E+F ++GE+ + D +TGR+RGF F+VF D E+ ++E
Sbjct: 22 DRLREYFGRFGEVTEAVIMRDRSTGRARGFGFVVFADATVAERVTIE 68
Score = 39.7 bits (91), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 601 GIVDKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
G+ +TE + + +F ++G I +V + D NT R RGF FI + ++++KA
Sbjct: 114 GLPSNVTEADFRGYFEQFGVITDVVVMYDHNTQRPRGFGFITYDSEDAVDKA 165
Score = 39.3 bits (90), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 30/55 (54%)
Query: 445 IIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE 499
I + + YD + + + F FIT++ E V L ++N K V+VKKA PK +
Sbjct: 134 ITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALHKSFHELNGKMVEVKKAVPKEQ 188
>gi|115475858|ref|NP_001061525.1| Os08g0320100 [Oryza sativa Japonica Group]
gi|35215091|dbj|BAC92448.1| RNA recognition motif (RRM)-containing protein-like [Oryza sativa
Japonica Group]
gi|42409159|dbj|BAD10426.1| RNA recognition motif (RRM)-containing protein-like [Oryza sativa
Japonica Group]
gi|113623494|dbj|BAF23439.1| Os08g0320100 [Oryza sativa Japonica Group]
gi|215768436|dbj|BAH00665.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218200931|gb|EEC83358.1| hypothetical protein OsI_28764 [Oryza sativa Indica Group]
gi|258644640|dbj|BAI39889.1| ribonucleoprotein-like [Oryza sativa Indica Group]
Length = 350
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/159 (38%), Positives = 87/159 (54%), Gaps = 17/159 (10%)
Query: 116 LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNKKI 175
KE+F KYGEI + + D T + RGF FI F D +V D + E NHVIN K++
Sbjct: 31 FKEYFGKYGEIVDAVIMKDRFTQKPRGFGFITFAD------PAVVDRVIEDNHVINGKEV 84
Query: 176 EAKKAKAKSG---------KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRK 226
E K+ K KIFVGGL +K++E K F++FG ++E E+ D S ++ +
Sbjct: 85 EIKRTIPKGAAPLKDFKTKKIFVGGLPSALKEDEFKEFFSKFGKVVEHEIIRDHSTNRSR 144
Query: 227 NFCFITFEHESVVIDLLKNPKQKI--NDKEVDVKKATPK 263
F F+ F+ E V +LL I N +V++KKA PK
Sbjct: 145 GFGFVVFDAEKTVDELLAKKGNMIDLNGSQVEIKKAEPK 183
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Query: 182 AKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVID 241
A KIF+GGL + K +F ++G I++ + D+ + + F FITF +VV
Sbjct: 12 ASPAKIFIGGLPKDTTMGTFKEYFGKYGEIVDAVIMKDRFTQKPRGFGFITFADPAVVDR 71
Query: 242 LLKNPKQKINDKEVDVKKATPK 263
++++ IN KEV++K+ PK
Sbjct: 72 VIED-NHVINGKEVEIKRTIPK 92
Score = 46.6 bits (109), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 42/71 (59%), Gaps = 5/71 (7%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHV-INN 172
+E KE FSK+G++ + D +T RSRGF F+VF EK E + +GN + +N
Sbjct: 117 DEFKEFFSKFGKVVEHEIIRDHSTNRSRGFGFVVF----DAEKTVDELLAKKGNMIDLNG 172
Query: 173 KKIEAKKAKAK 183
++E KKA+ K
Sbjct: 173 SQVEIKKAEPK 183
Score = 39.3 bits (90), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVED 655
D KE+F KYGEI + + D T + RGF FI F D +++ +ED
Sbjct: 25 DTTMGTFKEYFGKYGEIVDAVIMKDRFTQKPRGFGFITFADPAVVDRV-IED 75
>gi|312377573|gb|EFR24379.1| hypothetical protein AND_11086 [Anopheles darlingi]
Length = 405
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 93/160 (58%), Gaps = 15/160 (9%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
E L+ +FS+YGE+ + + + TGRSRGF F+ F D E++++A + G H ++ +
Sbjct: 26 ENLQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPENVDRA-----LENGPHTLDGR 80
Query: 174 KIEAKKAKAKS----------GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKS 223
I+ K +S K+F+GGL P + + ++++ F ++GN++E + YD+ K
Sbjct: 81 TIDPKPCNPRSQHKPKRTGGYPKVFLGGLPPNITETDLRSFFCRYGNVMEVVIMYDQEKK 140
Query: 224 QRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ + F F++FE+E V + I+ K+V+VKKA P+
Sbjct: 141 KSRGFGFLSFENEVAVERATTDHFVHISGKQVEVKKAEPR 180
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 47/89 (52%)
Query: 175 IEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFE 234
I A+ + GK+FVGGLS E E ++ +F+++G +I+ + + + + F F+TF
Sbjct: 2 IPAELDDHEKGKLFVGGLSWETTHENLQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFA 61
Query: 235 HESVVIDLLKNPKQKINDKEVDVKKATPK 263
V L+N ++ + +D K P+
Sbjct: 62 DPENVDRALENGPHTLDGRTIDPKPCNPR 90
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 31/44 (70%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
E L+ +FS+YGE+ + + + TGRSRGF F+ F D E++++A
Sbjct: 26 ENLQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPENVDRA 69
Score = 39.3 bits (90), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 601 GIVDKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVE 654
G+ ITE +L+ F +YG + V + D +SRGF F+ F++ ++E+A+ +
Sbjct: 108 GLPPNITETDLRSFFCRYGNVMEVVIMYDQEKKKSRGFGFLSFENEVAVERATTD 162
>gi|225447606|ref|XP_002272993.1| PREDICTED: uncharacterized protein LOC100246008 [Vitis vinifera]
Length = 478
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/177 (37%), Positives = 92/177 (51%), Gaps = 30/177 (16%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+ LK++FS YGE+ + D TGR+RGF F+VF D A E VI E H I+ +
Sbjct: 20 DRLKDYFSNYGEVVEAVIMKDRTTGRARGFGFVVFAD-----PAVAERVIKE-KHNIDGR 73
Query: 174 KIEAKKAKAK---------SG------------KIFVGGLSPEMKDEEIKAHFAQFGNII 212
+EAKKA K SG KIFVGGL+ + + + K +F QFG I
Sbjct: 74 MVEAKKAVPKDDQSILSRNSGSIHGSPGPGRTRKIFVGGLASTVTESDFKKYFDQFGAIT 133
Query: 213 ETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK---PEP 266
+ + YD + + + F FIT+E E V +L ++N K V+VK+A PK P P
Sbjct: 134 DVVVMYDHNTQRPRGFGFITYESEEAVDKVLLKTFHELNGKMVEVKRAVPKELSPGP 190
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GK+F+GG+S + ++ +K +F+ +G ++E + D++ + + F F+ F +V ++K
Sbjct: 6 GKLFIGGISWDTNEDRLKDYFSNYGEVVEAVIMKDRTTGRARGFGFVVFADPAVAERVIK 65
Query: 245 NPKQKINDKEVDVKKATPKPE 265
K I+ + V+ KKA PK +
Sbjct: 66 E-KHNIDGRMVEAKKAVPKDD 85
Score = 47.4 bits (111), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D + LK++FS YGE+ + D TGR+RGF F+VF D E+
Sbjct: 16 DTNEDRLKDYFSNYGEVVEAVIMKDRTTGRARGFGFVVFADPAVAER 62
Score = 40.4 bits (93), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 445 IIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK---PEP 500
I + + YD + + + F FIT+E E V +L ++N K V+VK+A PK P P
Sbjct: 132 ITDVVVMYDHNTQRPRGFGFITYESEEAVDKVLLKTFHELNGKMVEVKRAVPKELSPGP 190
>gi|219362753|ref|NP_001137092.1| uncharacterized protein LOC100217268 [Zea mays]
gi|194698334|gb|ACF83251.1| unknown [Zea mays]
gi|323388723|gb|ADX60166.1| SNF2 transcription factor [Zea mays]
gi|413925208|gb|AFW65140.1| hypothetical protein ZEAMMB73_790427 [Zea mays]
Length = 383
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/207 (35%), Positives = 105/207 (50%), Gaps = 30/207 (14%)
Query: 118 EHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNKKIEA 177
HF +YGEI + + D +T + RGF FI + D +V D + E NHVIN K++E
Sbjct: 43 RHFGQYGEIVDSVIMKDRHTSQPRGFGFITYSD------PAVVDKVIEDNHVINGKQVEI 96
Query: 178 KKA-----------KAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRK 226
K+ K+ KIFVGGL + ++E K+ FA++G +++ ++ +D + +
Sbjct: 97 KRTIPKGSVQSSSKDFKTKKIFVGGLPSTLTEDEFKSFFARYGTVVDHQIMFDHETKRSR 156
Query: 227 NFCFITFEHESVVIDLLKNPKQ-KINDKEVDVKKATPK------PEPFGVRGGRGGRGGR 279
F FI F E VV DLL N + +V++KKA PK P P VR R
Sbjct: 157 GFGFIVFASEQVVDDLLANGNMVDLAGSKVEIKKAEPKKSSNAPPPPVHVRNARSAY-DS 215
Query: 280 GGRGGRMAGGYGG----YGGY-GGGYG 301
G R A YGG YG Y GGG+G
Sbjct: 216 GSRDHPSADNYGGMASAYGNYRGGGFG 242
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GKIFVGGL + D HF Q+G I+++ + D+ SQ + F FIT+ +VV +++
Sbjct: 25 GKIFVGGLPRDTTDATFVRHFGQYGEIVDSVIMKDRHTSQPRGFGFITYSDPAVVDKVIE 84
Query: 245 NPKQKINDKEVDVKKATPK 263
+ IN K+V++K+ PK
Sbjct: 85 D-NHVINGKQVEIKRTIPK 102
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 48/87 (55%), Gaps = 7/87 (8%)
Query: 99 KNKMVSHPGIVHKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 157
K K + G+ +TE E K F++YG + + + D T RSRGF FIVF +
Sbjct: 113 KTKKIFVGGLPSTLTEDEFKSFFARYGTVVDHQIMFDHETKRSRGFGFIVFASEQ----- 167
Query: 158 SVEDVIAEGNHV-INNKKIEAKKAKAK 183
V+D++A GN V + K+E KKA+ K
Sbjct: 168 VVDDLLANGNMVDLAGSKVEIKKAEPK 194
>gi|219363315|ref|NP_001136724.1| uncharacterized protein LOC100216861 [Zea mays]
gi|194696774|gb|ACF82471.1| unknown [Zea mays]
gi|414883906|tpg|DAA59920.1| TPA: RNA-binding protein [Zea mays]
Length = 469
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 90/173 (52%), Gaps = 27/173 (15%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+ L+E+F ++GE+ + D +TGR+RGF F+VF D E+ ++E H+I+ +
Sbjct: 22 DRLREYFGRFGEVTEAVIMRDRSTGRARGFGFVVFADATVAERVTIEK------HMIDGR 75
Query: 174 KIEAKKA---------------------KAKSGKIFVGGLSPEMKDEEIKAHFAQFGNII 212
+EAKKA ++ KIFVGGL + + + + +F QFG I
Sbjct: 76 MVEAKKAVPRDDHSIVSKSNTSSIGSPGPGRTRKIFVGGLPSNVTEADFRGYFEQFGVIT 135
Query: 213 ETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE 265
+ + YD + + + F FIT++ E V L ++N K V+VKKA PK +
Sbjct: 136 DVVVMYDHNTQRPRGFGFITYDSEDAVDKALHKSFHELNGKMVEVKKAVPKEQ 188
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Query: 184 SGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLL 243
SGK+FVGG+S E ++ ++ +F +FG + E + D+S + + F F+ F ++ V + +
Sbjct: 7 SGKLFVGGISWETDEDRLREYFGRFGEVTEAVIMRDRSTGRARGFGFVVFA-DATVAERV 65
Query: 244 KNPKQKINDKEVDVKKATPK 263
K I+ + V+ KKA P+
Sbjct: 66 TIEKHMIDGRMVEAKKAVPR 85
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 31/47 (65%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVE 654
+ L+E+F ++GE+ + D +TGR+RGF F+VF D E+ ++E
Sbjct: 22 DRLREYFGRFGEVTEAVIMRDRSTGRARGFGFVVFADATVAERVTIE 68
Score = 39.7 bits (91), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 601 GIVDKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
G+ +TE + + +F ++G I +V + D NT R RGF FI + ++++KA
Sbjct: 114 GLPSNVTEADFRGYFEQFGVITDVVVMYDHNTQRPRGFGFITYDSEDAVDKA 165
Score = 39.3 bits (90), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 30/55 (54%)
Query: 445 IIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE 499
I + + YD + + + F FIT++ E V L ++N K V+VKKA PK +
Sbjct: 134 ITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALHKSFHELNGKMVEVKKAVPKEQ 188
>gi|168003443|ref|XP_001754422.1| predicted protein [Physcomitrella patens subsp. patens]
gi|168003449|ref|XP_001754425.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694524|gb|EDQ80872.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694527|gb|EDQ80875.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 177
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 84/145 (57%), Gaps = 16/145 (11%)
Query: 113 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINN 172
T+ L+ HF KYGEI + + D +TG RGF F+ F D +V D + HVI+
Sbjct: 14 TDNLQSHFKKYGEIIDAVIMKDRSTGHPRGFGFVTFAD------PAVCDNVVLDKHVIDG 67
Query: 173 KKIEAKKA----------KAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSK 222
+ +EAKK+ K+ KIFVGG+ P + DEE K++F FG+++E ++ D S
Sbjct: 68 RTVEAKKSVPRENMAASKGPKTKKIFVGGIPPSITDEEFKSYFGGFGSVVEHQIMQDHST 127
Query: 223 SQRKNFCFITFEHESVVIDLLKNPK 247
+ + F F+TF++E VV D+L + K
Sbjct: 128 GRSRGFGFVTFDNEQVVEDILAHGK 152
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GKIF+GGLS + + +++HF ++G II+ + D+S + F F+TF +V +++
Sbjct: 1 GKIFIGGLSWDTSTDNLQSHFKKYGEIIDAVIMKDRSTGHPRGFGFVTFADPAVCDNVVL 60
Query: 245 NPKQKINDKEVDVKKATPK 263
+ K I+ + V+ KK+ P+
Sbjct: 61 D-KHVIDGRTVEAKKSVPR 78
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 25/41 (60%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKD 644
D T+ L+ HF KYGEI + + D +TG RGF F+ F D
Sbjct: 11 DTSTDNLQSHFKKYGEIIDAVIMKDRSTGHPRGFGFVTFAD 51
Score = 40.0 bits (92), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 593 KNKMVSHPGIVDKIT-EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLE 649
K K + GI IT EE K +F +G + + D +TGRSRGF F+ F + + +E
Sbjct: 88 KTKKIFVGGIPPSITDEEFKSYFGGFGSVVEHQIMQDHSTGRSRGFGFVTFDNEQVVE 145
>gi|356501721|ref|XP_003519672.1| PREDICTED: uncharacterized protein LOC100799330 [Glycine max]
Length = 475
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/190 (32%), Positives = 97/190 (51%), Gaps = 28/190 (14%)
Query: 96 MEAKNKMVSHPGIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESL 154
M++ N + GI EE L+E+F YGE+ + D TGR+RGF F+VF D
Sbjct: 1 MQSDNGKLFIGGISWDTNEERLREYFCTYGEVVEAVIMKDRTTGRARGFGFVVFSD---- 56
Query: 155 EKASVEDVIAEGNHVINNKKIEAKKA---------------------KAKSGKIFVGGLS 193
+V +++ + H I+ + +EAKKA ++ KIFVGGL+
Sbjct: 57 --PAVAEIVIKEKHNIDGRMVEAKKAVPRDDQNILSRNSGSIHGSPGPGRTRKIFVGGLA 114
Query: 194 PEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDK 253
+ + + K +F QFG I + + YD + + + F FIT++ E V +L ++N K
Sbjct: 115 STVTESDFKKYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDKVLLKTFHELNGK 174
Query: 254 EVDVKKATPK 263
V+VK+A PK
Sbjct: 175 MVEVKRAVPK 184
Score = 45.8 bits (107), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 26/46 (56%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLE 649
D E L+E+F YGE+ + D TGR+RGF F+VF D E
Sbjct: 16 DTNEERLREYFCTYGEVVEAVIMKDRTTGRARGFGFVVFSDPAVAE 61
Score = 38.9 bits (89), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 30/53 (56%)
Query: 445 IIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 497
I + + YD + + + F FIT++ E V +L ++N K V+VK+A PK
Sbjct: 132 ITDVVVMYDHNTQRPRGFGFITYDSEEAVDKVLLKTFHELNGKMVEVKRAVPK 184
>gi|156055736|ref|XP_001593792.1| hypothetical protein SS1G_05220 [Sclerotinia sclerotiorum 1980]
gi|154703004|gb|EDO02743.1| hypothetical protein SS1G_05220 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 521
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 108/207 (52%), Gaps = 37/207 (17%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHV---- 169
+ LKE+FS++GE+ T+ D +GRSRGF F+ FKD ++ V++ +G V
Sbjct: 31 QSLKEYFSQFGEVLECTVMRDGASGRSRGFGFLTFKDARTVNIVMVKEHYLDGKIVRPDL 90
Query: 170 --INNK----------------------KIEAKKA-----KAKSGKIFVGGLSPEMKDEE 200
NN KI+ K+A + ++ KIFVGG+S + +++
Sbjct: 91 KTFNNSLRSYPSKFHYLASKNISSHSNFKIDPKRAIPRDEQERTSKIFVGGVSQDASEQD 150
Query: 201 IKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKA 260
K +F QFG +++ + DK + + F F+TF+ E+ V L+ P + I+ K ++VKKA
Sbjct: 151 FKEYFMQFGRVVDATLMMDKDTGRPRGFGFVTFDSEAAVEACLEGPLE-IHGKPIEVKKA 209
Query: 261 TPK---PEPFGVRGGRGGRGGRGGRGG 284
P+ E VRG RGGR +GG G
Sbjct: 210 QPRGNIREEEEVRGPRGGRFKKGGNAG 236
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 50/94 (53%), Gaps = 12/94 (12%)
Query: 572 SHYHYLFDQNLRTHYFYIVEAKNKMVSHP----------GIVDKITEE-LKEHFSKYGEI 620
S +HYL +N+ +H + ++ K + G+ +E+ KE+F ++G +
Sbjct: 102 SKFHYLASKNISSHSNFKIDPKRAIPRDEQERTSKIFVGGVSQDASEQDFKEYFMQFGRV 161
Query: 621 ENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVE 654
+ TL D +TGR RGF F+ F D+E+ +A +E
Sbjct: 162 VDATLMMDKDTGRPRGFGFVTF-DSEAAVEACLE 194
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 33/51 (64%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYF 658
+ LKE+FS++GE+ T+ D +GRSRGF F+ FKD ++ V++ Y
Sbjct: 31 QSLKEYFSQFGEVLECTVMRDGASGRSRGFGFLTFKDARTVNIVMVKEHYL 81
Score = 46.2 bits (108), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 445 IIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK---PEPF 501
+++ + DK + + F F+TF+ E+ V L+ P + I+ K ++VKKA P+ E
Sbjct: 161 VVDATLMMDKDTGRPRGFGFVTFDSEAAVEACLEGPLE-IHGKPIEVKKAQPRGNIREEE 219
Query: 502 GVRGGRGGRGGRGGRGG 518
VRG RGGR +GG G
Sbjct: 220 EVRGPRGGRFKKGGNAG 236
Score = 45.8 bits (107), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 34/54 (62%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVV 239
K+F+GGL+ E D+ +K +F+QFG ++E + D + + + F F+TF+ V
Sbjct: 18 KMFIGGLNWETTDQSLKEYFSQFGEVLECTVMRDGASGRSRGFGFLTFKDARTV 71
>gi|356566592|ref|XP_003551514.1| PREDICTED: uncharacterized protein LOC100794390 [Glycine max]
Length = 479
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 88/171 (51%), Gaps = 27/171 (15%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
E LK++F KYGE+ + D TGR+RGF F+VF D E+ ++ H+I+ +
Sbjct: 20 ERLKDYFGKYGEVIEAVIMRDRVTGRARGFGFVVFADPSVAERVIMD------KHIIDGR 73
Query: 174 KIEAKKA---------------------KAKSGKIFVGGLSPEMKDEEIKAHFAQFGNII 212
+EAKKA ++ KIFVGGL + + + K +F QFG I
Sbjct: 74 TVEAKKAVPRDDQQNINRQSGSAHASPGPGRTKKIFVGGLPSTITESDFKMYFDQFGTIT 133
Query: 213 ETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ + YD + + + F FIT++ E V +L ++N K V+VK+A PK
Sbjct: 134 DVVVMYDHNTQRPRGFGFITYDSEEAVDRVLYKTFHELNGKMVEVKRAVPK 184
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GK+F+GG+S + +E +K +F ++G +IE + D+ + + F F+ F SV ++
Sbjct: 6 GKLFIGGISWDTDEERLKDYFGKYGEVIEAVIMRDRVTGRARGFGFVVFADPSVAERVIM 65
Query: 245 NPKQKINDKEVDVKKATPK 263
+ K I+ + V+ KKA P+
Sbjct: 66 D-KHIIDGRTVEAKKAVPR 83
Score = 47.4 bits (111), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 28/47 (59%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D E LK++F KYGE+ + D TGR+RGF F+VF D E+
Sbjct: 16 DTDEERLKDYFGKYGEVIEAVIMRDRVTGRARGFGFVVFADPSVAER 62
>gi|326479392|gb|EGE03402.1| heterogeneous nuclear ribonucleoprotein HRP1 [Trichophyton equinum
CBS 127.97]
Length = 493
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 53/152 (34%), Positives = 91/152 (59%), Gaps = 3/152 (1%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGN--HVIN 171
+ LKE+FS++GE+ T+ D +GRSRGF F+ F D +++ V++ +G + I+
Sbjct: 13 QSLKEYFSQFGEVHECTVMRDGASGRSRGFGFLTFTDPKTVNTVMVKEHYLDGKILYKID 72
Query: 172 NKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFI 231
K+ + + ++ KIFVGG+S E ++E K F QFG +++ + DK + + F F+
Sbjct: 73 PKRAIPRDEQERTSKIFVGGVSQEATEQEFKQFFMQFGRVVDATLMIDKDTGRPRGFGFV 132
Query: 232 TFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
TF+ E+ V L P + I+ K ++VKKA P+
Sbjct: 133 TFDSEAAVEATLSVPLE-IHGKAIEVKKAQPR 163
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 33/51 (64%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYF 658
+ LKE+FS++GE+ T+ D +GRSRGF F+ F D +++ V++ Y
Sbjct: 13 QSLKEYFSQFGEVHECTVMRDGASGRSRGFGFLTFTDPKTVNTVMVKEHYL 63
Score = 43.5 bits (101), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 46/82 (56%), Gaps = 4/82 (4%)
Query: 187 IFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNP 246
+F+GGL+ E D+ +K +F+QFG + E + D + + + F F+TF V ++
Sbjct: 1 MFIGGLNWETTDQSLKEYFSQFGEVHECTVMRDGASGRSRGFGFLTFTDPKTVNTVMVK- 59
Query: 247 KQKINDK---EVDVKKATPKPE 265
+ ++ K ++D K+A P+ E
Sbjct: 60 EHYLDGKILYKIDPKRAIPRDE 81
Score = 42.7 bits (99), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 35/54 (64%), Gaps = 2/54 (3%)
Query: 601 GIVDKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASV 653
G+ + TE E K+ F ++G + + TL D +TGR RGF F+ F D+E+ +A++
Sbjct: 92 GVSQEATEQEFKQFFMQFGRVVDATLMIDKDTGRPRGFGFVTF-DSEAAVEATL 144
>gi|225563097|gb|EEH11376.1| heterogeneous nuclear ribonucleoprotein HRP1 [Ajellomyces
capsulatus G186AR]
Length = 410
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 92/150 (61%), Gaps = 2/150 (1%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+ LK++FS++GE++ T+ D TGRSRGF F+ FKD +++ V++ +G +I+ K
Sbjct: 168 QSLKDYFSQFGEVQECTVMRDGATGRSRGFGFLTFKDPKTVNTVMVKEHYLDGK-IIDPK 226
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
+ + + ++ KIFVGG+S E +++ K F QFG +++ + DK + + F F+TF
Sbjct: 227 RAIPRDEQERTSKIFVGGVSQEATEQDFKQFFMQFGRVVDATLMIDKDSGRPRGFGFVTF 286
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ E+ V L P + I K ++VKKA P+
Sbjct: 287 DSEAAVEATLSGPLE-ILGKPIEVKKAQPR 315
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 35/51 (68%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYF 658
+ LK++FS++GE++ T+ D TGRSRGF F+ FKD +++ V++ Y
Sbjct: 168 QSLKDYFSQFGEVQECTVMRDGATGRSRGFGFLTFKDPKTVNTVMVKEHYL 218
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+F+GGL+ E D+ +K +F+QFG + E + D + + + F F+TF+ V ++
Sbjct: 155 KMFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDGATGRSRGFGFLTFKDPKTVNTVMVK 214
Query: 246 PKQKINDKEVDVKKATPKPE 265
+ ++ K +D K+A P+ E
Sbjct: 215 -EHYLDGKIIDPKRAIPRDE 233
Score = 38.9 bits (89), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 35/54 (64%), Gaps = 2/54 (3%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASV 653
G+ + TE+ K+ F ++G + + TL D ++GR RGF F+ F D+E+ +A++
Sbjct: 244 GVSQEATEQDFKQFFMQFGRVVDATLMIDKDSGRPRGFGFVTF-DSEAAVEATL 296
>gi|14388456|dbj|BAB60767.1| hypothetical protein [Macaca fascicularis]
Length = 183
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 58/134 (43%), Positives = 82/134 (61%), Gaps = 9/134 (6%)
Query: 134 DPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNKKIEAKKAKAKSG----KIFV 189
DPNTGRSRGF FI+FKD ASVE V+ + H ++ + I+ KKA A KIFV
Sbjct: 2 DPNTGRSRGFGFILFKDA-----ASVEKVLDQKEHRLDGRVIDPKKAMAMKKDPVKKIFV 56
Query: 190 GGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQK 249
GGL+PE +E+I+ +F +FG I E+P D ++R+ F FITF+ E V +L+
Sbjct: 57 GGLNPEATEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLEKKFHT 116
Query: 250 INDKEVDVKKATPK 263
I+ + ++K A PK
Sbjct: 117 ISGSKCEIKVAQPK 130
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 42/70 (60%), Gaps = 5/70 (7%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
E+++E+F ++GEIE + L DP + RGF FI FK+ E ++K V+ + H I+
Sbjct: 66 EKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKK-----VLEKKFHTISGS 120
Query: 174 KIEAKKAKAK 183
K E K A+ K
Sbjct: 121 KCEIKVAQPK 130
Score = 46.6 bits (109), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 30/44 (68%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
E+++E+F ++GEIE + L DP + RGF FI FK+ E ++K
Sbjct: 66 EKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKKV 109
Score = 43.1 bits (100), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 18/24 (75%), Positives = 20/24 (83%)
Query: 628 DPNTGRSRGFAFIVFKDTESLEKA 651
DPNTGRSRGF FI+FKD S+EK
Sbjct: 2 DPNTGRSRGFGFILFKDAASVEKV 25
>gi|363748813|ref|XP_003644624.1| hypothetical protein Ecym_2050 [Eremothecium cymbalariae
DBVPG#7215]
gi|356888257|gb|AET37807.1| Hypothetical protein Ecym_2050 [Eremothecium cymbalariae
DBVPG#7215]
Length = 541
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 98/163 (60%), Gaps = 12/163 (7%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + TE+ L+E+FSKYG + V + D TGRSRGF F+ F D S+ D + +
Sbjct: 177 GLNWETTEDNLREYFSKYGTVTEVKIMRDGTTGRSRGFGFLSFADASSV------DEVVK 230
Query: 166 GNHVINNKKIEAKKA-----KAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDK 220
H+++ K I+ K+A + K+GKIFVGG+ P+++ +E + F+++G+II+ ++ DK
Sbjct: 231 TQHILDGKVIDPKRAIPREEQDKTGKIFVGGIGPDVRPKEFEEFFSEWGSIIDAQLMLDK 290
Query: 221 SKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ + F FIT++ V + +N + K +++K+A P+
Sbjct: 291 DTGRSRGFGFITYDSPDAVDRVCQNKFIEFKGKRIEIKRAEPR 333
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 58/97 (59%), Gaps = 5/97 (5%)
Query: 173 KKIEAKKAKAK----SGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNF 228
++ EA++ KA K+F+GGL+ E ++ ++ +F+++G + E ++ D + + + F
Sbjct: 155 QQQEARQVKADLSRDINKMFIGGLNWETTEDNLREYFSKYGTVTEVKIMRDGTTGRSRGF 214
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE 265
F++F S V +++K + ++ K +D K+A P+ E
Sbjct: 215 GFLSFADASSVDEVVKT-QHILDGKVIDPKRAIPREE 250
Score = 47.0 bits (110), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 29/43 (67%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+ L+E+FSKYG + V + D TGRSRGF F+ F D S+++
Sbjct: 185 DNLREYFSKYGTVTEVKIMRDGTTGRSRGFGFLSFADASSVDE 227
Score = 40.4 bits (93), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 29/43 (67%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+E +E FS++G I + L D +TGRSRGF FI + +++++
Sbjct: 269 KEFEEFFSEWGSIIDAQLMLDKDTGRSRGFGFITYDSPDAVDR 311
>gi|242064522|ref|XP_002453550.1| hypothetical protein SORBIDRAFT_04g007860 [Sorghum bicolor]
gi|241933381|gb|EES06526.1| hypothetical protein SORBIDRAFT_04g007860 [Sorghum bicolor]
Length = 391
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 93/169 (55%), Gaps = 18/169 (10%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + TEE +HF KYG I + + D +T RGF F+ F D SV D + E
Sbjct: 62 GVAWETTEESFSKHFEKYGAITDSVIMKDKHTKMPRGFGFVTFSD------PSVIDKVLE 115
Query: 166 GNHVINNKKIEAK----------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETE 215
+HVI+ + +E K K K+ KIF+GGL P + ++E+K HF+ +G ++E +
Sbjct: 116 DDHVIDGRTVEVKRTVPREEMTTKDGPKTRKIFIGGLPPSLTEDELKDHFSSYGKVVEHQ 175
Query: 216 MPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQK-INDKEVDVKKATPK 263
+ D S + + F F+TFE E V ++ + + + K+V++KKA PK
Sbjct: 176 IMLDHSTGRSRGFGFVTFESEDSVERVISEGRMRDLGGKQVEIKKAEPK 224
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 184 SGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLL 243
SGKIFVGG++ E +E HF ++G I ++ + DK + F F+TF SV+ +L
Sbjct: 55 SGKIFVGGVAWETTEESFSKHFEKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVIDKVL 114
Query: 244 KNPKQKINDKEVDVKKATPKPE 265
++ I+ + V+VK+ P+ E
Sbjct: 115 ED-DHVIDGRTVEVKRTVPREE 135
Score = 47.8 bits (112), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 601 GIVDKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVE 654
G+ +TE ELK+HFS YG++ + D +TGRSRGF F+ F+ +S+E+ E
Sbjct: 151 GLPPSLTEDELKDHFSSYGKVVEHQIMLDHSTGRSRGFGFVTFESEDSVERVISE 205
Score = 39.3 bits (90), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVED 655
G+ + TEE +HF KYG I + + D +T RGF F+ F D ++K +D
Sbjct: 62 GVAWETTEESFSKHFEKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVIDKVLEDD 117
>gi|357122209|ref|XP_003562808.1| PREDICTED: uncharacterized protein LOC100836006 [Brachypodium
distachyon]
Length = 472
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 100/192 (52%), Gaps = 28/192 (14%)
Query: 96 MEAKNKMVSHPGIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESL 154
MEA + + GI + EE L+E+F ++GE+ + D NTGR+RGF FIVF +
Sbjct: 1 MEADSGKLFVGGISWETDEERLREYFGRFGEVTEAVIMRDRNTGRARGFGFIVFAEPGVA 60
Query: 155 EKASVEDVIAEGNHVINNKKIEAKKA---------------------KAKSGKIFVGGLS 193
E+ +++ H+I+ + +EAKKA ++ KIFVGGL+
Sbjct: 61 ERVTMDK------HMIDGRMVEAKKAVPRDDQSIASKNNGSSIGSPGPVRTRKIFVGGLA 114
Query: 194 PEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDK 253
+ + E + +F QFG I + + YD + + + F FIT++ E V L ++N K
Sbjct: 115 SNVTEVEFRRYFEQFGMITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALHKNFHELNGK 174
Query: 254 EVDVKKATPKPE 265
V+VK+A PK +
Sbjct: 175 MVEVKRAVPKEQ 186
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVE 654
E L+E+F ++GE+ + D NTGR+RGF FIVF + E+ +++
Sbjct: 20 ERLREYFGRFGEVTEAVIMRDRNTGRARGFGFIVFAEPGVAERVTMD 66
Score = 42.7 bits (99), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 601 GIVDKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
G+ +TE E + +F ++G I +V + D NT R RGF FI + ++++KA
Sbjct: 112 GLASNVTEVEFRRYFEQFGMITDVVVMYDHNTQRPRGFGFITYDSEDAVDKA 163
>gi|367014029|ref|XP_003681514.1| hypothetical protein TDEL_0E00600 [Torulaspora delbrueckii]
gi|359749175|emb|CCE92303.1| hypothetical protein TDEL_0E00600 [Torulaspora delbrueckii]
Length = 547
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 102/163 (62%), Gaps = 12/163 (7%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + TE+ L+++FSKYG++ ++ + D NTGRSRGF F+ F E +SV++V+ +
Sbjct: 163 GLNWETTEDTLRDYFSKYGKVIDLKIMKDTNTGRSRGFGFLTFD-----EPSSVDEVV-K 216
Query: 166 GNHVINNKKIEAKKA-----KAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDK 220
H+++ K I+ K+A + K+GKIFVGG+ +++ +E + FAQ+G II+ ++ DK
Sbjct: 217 TQHILDGKVIDPKRAIPREEQDKTGKIFVGGIGADVRPKEFEEFFAQWGTIIDAQLMLDK 276
Query: 221 SKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ + F F+T++ V + +N K++++K+A P+
Sbjct: 277 DTGRSRGFGFVTYDSPDAVDRVCQNKFIDFKGKKIEIKRAEPR 319
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 52/80 (65%), Gaps = 1/80 (1%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+F+GGL+ E ++ ++ +F+++G +I+ ++ D + + + F F+TF+ S V +++K
Sbjct: 158 KMFIGGLNWETTEDTLRDYFSKYGKVIDLKIMKDTNTGRSRGFGFLTFDEPSSVDEVVKT 217
Query: 246 PKQKINDKEVDVKKATPKPE 265
+ ++ K +D K+A P+ E
Sbjct: 218 -QHILDGKVIDPKRAIPREE 236
Score = 46.6 bits (109), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 32/43 (74%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+ L+++FSKYG++ ++ + D NTGRSRGF F+ F + S+++
Sbjct: 171 DTLRDYFSKYGKVIDLKIMKDTNTGRSRGFGFLTFDEPSSVDE 213
Score = 39.3 bits (90), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 30/48 (62%)
Query: 603 VDKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D +E +E F+++G I + L D +TGRSRGF F+ + +++++
Sbjct: 250 ADVRPKEFEEFFAQWGTIIDAQLMLDKDTGRSRGFGFVTYDSPDAVDR 297
>gi|224110618|ref|XP_002315580.1| predicted protein [Populus trichocarpa]
gi|222864620|gb|EEF01751.1| predicted protein [Populus trichocarpa]
Length = 459
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 97/183 (53%), Gaps = 32/183 (17%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
GI + +EE L+++F +YG++ + D TGR RGF F+VF D +V D++ +
Sbjct: 12 GISWETSEEKLRDYFGQYGDVLQAVVMKDKTTGRPRGFGFVVFADP------AVLDMVLQ 65
Query: 166 GNHVINNKKIEAKKA--------KAKSG-----------------KIFVGGLSPEMKDEE 200
H I+ + +EAK+A A++G KIFVGGL P + ++
Sbjct: 66 DKHTIDGRMVEAKRALSREEQQTNARAGNLNPARNTSGGGNIRTKKIFVGGLPPTLTEDG 125
Query: 201 IKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKA 260
+ +F FG + + + YD+S + + F FI+F+ E V +L+ +N K+V+VK+A
Sbjct: 126 FRQYFEAFGFVADVVIMYDQSTQRPRGFGFISFDTEDAVDRVLQRSFHDLNGKQVEVKRA 185
Query: 261 TPK 263
PK
Sbjct: 186 LPK 188
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GK+F+GG+S E +E+++ +F Q+G++++ + DK+ + + F F+ F + V+D++
Sbjct: 6 GKLFIGGISWETSEEKLRDYFGQYGDVLQAVVMKDKTTGRPRGFGFVVFA-DPAVLDMVL 64
Query: 245 NPKQKINDKEVDVKKATPKPE 265
K I+ + V+ K+A + E
Sbjct: 65 QDKHTIDGRMVEAKRALSREE 85
Score = 44.7 bits (104), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 27/42 (64%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLE 649
E+L+++F +YG++ + D TGR RGF F+VF D L+
Sbjct: 20 EKLRDYFGQYGDVLQAVVMKDKTTGRPRGFGFVVFADPAVLD 61
Score = 42.4 bits (98), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 32/53 (60%)
Query: 445 IIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 497
+ + + YD+S + + F FI+F+ E V +L+ +N K+V+VK+A PK
Sbjct: 136 VADVVIMYDQSTQRPRGFGFISFDTEDAVDRVLQRSFHDLNGKQVEVKRALPK 188
>gi|58262530|ref|XP_568675.1| hypothetical protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|134119022|ref|XP_772014.1| hypothetical protein CNBN1910 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50254618|gb|EAL17367.1| hypothetical protein CNBN1910 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57230849|gb|AAW47158.1| conserved hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21]
Length = 480
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 97/163 (59%), Gaps = 13/163 (7%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + TE L E+ ++GEI+ T+ DP +GRSRGFAF+ ++D ASV V+A+
Sbjct: 118 GLNWETTEAGLSEYMGQFGEIDACTIMRDP-SGRSRGFAFLTYRD-----PASVTKVMAQ 171
Query: 166 GNHVINNKKIEAKKA-----KAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDK 220
+H ++ K+I+ K+A ++ K+FVGGL+P + E +K+ QFG +++ + +DK
Sbjct: 172 THH-LDGKQIDPKRAIPRAEHERTAKVFVGGLAPSVTGESLKSFLCQFGQVMDATVMFDK 230
Query: 221 SKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ K F F TF+ E V + ++ K++++KKA P+
Sbjct: 231 ETGRSKGFAFATFQDEESVGRAMAASGVELEGKQIEIKKAQPR 273
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 51/92 (55%), Gaps = 9/92 (9%)
Query: 107 GIVHKIT-EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ +T E LK ++G++ + T+ D TGRS+GFAF F+D ES+ +A +A
Sbjct: 201 GLAPSVTGESLKSFLCQFGQVMDATVMFDKETGRSKGFAFATFQDEESVGRA-----MAA 255
Query: 166 GNHVINNKKIEAKKAKAK---SGKIFVGGLSP 194
+ K+IE KKA+ + G F G ++P
Sbjct: 256 SGVELEGKQIEIKKAQPRGTAQGSKFGGNMNP 287
Score = 45.8 bits (107), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Query: 601 GIVDKIT-EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
G+ +T E LK ++G++ + T+ D TGRS+GFAF F+D ES+ +A
Sbjct: 201 GLAPSVTGESLKSFLCQFGQVMDATVMFDKETGRSKGFAFATFQDEESVGRA 252
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Query: 610 LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVE 654
L E+ ++GEI+ T+ DP +GRSRGFAF+ ++D S+ K +
Sbjct: 128 LSEYMGQFGEIDACTIMRDP-SGRSRGFAFLTYRDPASVTKVMAQ 171
Score = 43.5 bits (101), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GK+F+GGL+ E + + + QFG I + D S R F F+T+ + V ++
Sbjct: 112 GKMFIGGLNWETTEAGLSEYMGQFGEIDACTIMRDPSGRSR-GFAFLTYRDPASVTKVMA 170
Query: 245 NPKQKINDKEVDVKKATPKPE 265
++ K++D K+A P+ E
Sbjct: 171 Q-THHLDGKQIDPKRAIPRAE 190
>gi|296084992|emb|CBI28407.3| unnamed protein product [Vitis vinifera]
Length = 401
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 66/177 (37%), Positives = 92/177 (51%), Gaps = 30/177 (16%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+ LK++FS YGE+ + D TGR+RGF F+VF D A E VI E H I+ +
Sbjct: 20 DRLKDYFSNYGEVVEAVIMKDRTTGRARGFGFVVFAD-----PAVAERVIKE-KHNIDGR 73
Query: 174 KIEAKKAKAK---------SG------------KIFVGGLSPEMKDEEIKAHFAQFGNII 212
+EAKKA K SG KIFVGGL+ + + + K +F QFG I
Sbjct: 74 MVEAKKAVPKDDQSILSRNSGSIHGSPGPGRTRKIFVGGLASTVTESDFKKYFDQFGAIT 133
Query: 213 ETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK---PEP 266
+ + YD + + + F FIT+E E V +L ++N K V+VK+A PK P P
Sbjct: 134 DVVVMYDHNTQRPRGFGFITYESEEAVDKVLLKTFHELNGKMVEVKRAVPKELSPGP 190
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GK+F+GG+S + ++ +K +F+ +G ++E + D++ + + F F+ F +V ++K
Sbjct: 6 GKLFIGGISWDTNEDRLKDYFSNYGEVVEAVIMKDRTTGRARGFGFVVFADPAVAERVIK 65
Query: 245 NPKQKINDKEVDVKKATPKPE 265
K I+ + V+ KKA PK +
Sbjct: 66 E-KHNIDGRMVEAKKAVPKDD 85
Score = 47.0 bits (110), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D + LK++FS YGE+ + D TGR+RGF F+VF D E+
Sbjct: 16 DTNEDRLKDYFSNYGEVVEAVIMKDRTTGRARGFGFVVFADPAVAER 62
Score = 39.7 bits (91), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 445 IIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK---PEP 500
I + + YD + + + F FIT+E E V +L ++N K V+VK+A PK P P
Sbjct: 132 ITDVVVMYDHNTQRPRGFGFITYESEEAVDKVLLKTFHELNGKMVEVKRAVPKELSPGP 190
>gi|451850144|gb|EMD63446.1| hypothetical protein COCSADRAFT_160854 [Cochliobolus sativus
ND90Pr]
Length = 569
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 96/158 (60%), Gaps = 3/158 (1%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + TE+ LK +FS++GE+ T+ D TGRSRGF F+ FKD + + V++ +
Sbjct: 113 GLNWETTEDSLKGYFSQFGEVSECTVMRDSATGRSRGFGFLTFKDPKCVNIVMVKEHYLD 172
Query: 166 GNHVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQR 225
G +I+ K+ ++ + ++ KIFVGG+S E +E+ F QFG +++ + DK +
Sbjct: 173 G-KIIDPKRAIPREEQERTSKIFVGGVSQEATEEDFTNFFKQFGRVVDATLMMDKETGRP 231
Query: 226 KNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ F F+TF+ ++ V L+ P Q I K+++VK+A P+
Sbjct: 232 RGFGFVTFDGDAAVDATLRGPLQ-ILGKQIEVKRAQPR 268
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 51/84 (60%), Gaps = 3/84 (3%)
Query: 183 KSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVV-ID 241
+ GK+F+GGL+ E ++ +K +F+QFG + E + D + + + F F+TF+ V I
Sbjct: 105 EDGKMFIGGLNWETTEDSLKGYFSQFGEVSECTVMRDSATGRSRGFGFLTFKDPKCVNIV 164
Query: 242 LLKNPKQKINDKEVDVKKATPKPE 265
++K + ++ K +D K+A P+ E
Sbjct: 165 MVK--EHYLDGKIIDPKRAIPREE 186
Score = 47.4 bits (111), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 32/51 (62%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYF 658
+ LK +FS++GE+ T+ D TGRSRGF F+ FKD + + V++ Y
Sbjct: 121 DSLKGYFSQFGEVSECTVMRDSATGRSRGFGFLTFKDPKCVNIVMVKEHYL 171
>gi|414887334|tpg|DAA63348.1| TPA: hypothetical protein ZEAMMB73_769138, partial [Zea mays]
Length = 467
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 100/191 (52%), Gaps = 27/191 (14%)
Query: 96 MEAKNKMVSHPGIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESL 154
MEA + + GI + E+ L+ +F ++GE+ + D NTGR+RGF F+VF D+
Sbjct: 1 MEADSGKLFVGGISWETDEDRLRAYFGRFGEVTEAVIMRDRNTGRARGFGFVVFADSGIA 60
Query: 155 EKASVEDVIAEGNHVINNKKIEAKKA--------------------KAKSGKIFVGGLSP 194
E+ +++ H+I+ + +EAKKA ++ KIFVGGL+
Sbjct: 61 ERVTLDK------HMIDGRMVEAKKAVPRDDQSIASKNNSSIGSPGPGRTRKIFVGGLAS 114
Query: 195 EMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKE 254
+ + E + +F QFG I + + YD + + + F FIT++ E V L ++N K
Sbjct: 115 NVTEVEFRRYFEQFGVITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALHKNFHELNGKM 174
Query: 255 VDVKKATPKPE 265
V+VK+A PK +
Sbjct: 175 VEVKRAVPKEQ 185
Score = 47.4 bits (111), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 31/47 (65%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVE 654
+ L+ +F ++GE+ + D NTGR+RGF F+VF D+ E+ +++
Sbjct: 20 DRLRAYFGRFGEVTEAVIMRDRNTGRARGFGFVVFADSGIAERVTLD 66
Score = 42.4 bits (98), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 601 GIVDKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
G+ +TE E + +F ++G I +V + D NT R RGF FI + ++++KA
Sbjct: 111 GLASNVTEVEFRRYFEQFGVITDVVVMYDHNTQRPRGFGFITYDSEDAVDKA 162
>gi|226494259|ref|NP_001146396.1| uncharacterized protein LOC100279976 [Zea mays]
gi|219887017|gb|ACL53883.1| unknown [Zea mays]
gi|223975747|gb|ACN32061.1| unknown [Zea mays]
Length = 470
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 100/191 (52%), Gaps = 27/191 (14%)
Query: 96 MEAKNKMVSHPGIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESL 154
MEA + + GI + E+ L+ +F ++GE+ + D NTGR+RGF F+VF D+
Sbjct: 1 MEADSGKLFVGGISWETDEDRLRAYFGRFGEVTEAVIMRDRNTGRARGFGFVVFADSGIA 60
Query: 155 EKASVEDVIAEGNHVINNKKIEAKKA--------------------KAKSGKIFVGGLSP 194
E+ +++ H+I+ + +EAKKA ++ KIFVGGL+
Sbjct: 61 ERVTLDK------HMIDGRMVEAKKAVPRDDQSIASKNNSSIGSPGPGRTRKIFVGGLAS 114
Query: 195 EMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKE 254
+ + E + +F QFG I + + YD + + + F FIT++ E V L ++N K
Sbjct: 115 NVTEVEFRRYFEQFGVITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALHKNFHELNGKM 174
Query: 255 VDVKKATPKPE 265
V+VK+A PK +
Sbjct: 175 VEVKRAVPKEQ 185
Score = 47.4 bits (111), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 31/47 (65%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVE 654
+ L+ +F ++GE+ + D NTGR+RGF F+VF D+ E+ +++
Sbjct: 20 DRLRAYFGRFGEVTEAVIMRDRNTGRARGFGFVVFADSGIAERVTLD 66
Score = 42.4 bits (98), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 601 GIVDKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
G+ +TE E + +F ++G I +V + D NT R RGF FI + ++++KA
Sbjct: 111 GLASNVTEVEFRRYFEQFGVITDVVVMYDHNTQRPRGFGFITYDSEDAVDKA 162
>gi|224129106|ref|XP_002320502.1| predicted protein [Populus trichocarpa]
gi|222861275|gb|EEE98817.1| predicted protein [Populus trichocarpa]
Length = 479
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 61/172 (35%), Positives = 88/172 (51%), Gaps = 28/172 (16%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
E LK +F +GE+ + D TGR+RGF F+VF D A E VI E H I+ +
Sbjct: 20 ERLKGYFRSFGEVVEAVIMKDRTTGRARGFGFVVFAD-----PAVAERVIKE-KHSIDGR 73
Query: 174 KIEAKKA----------------------KAKSGKIFVGGLSPEMKDEEIKAHFAQFGNI 211
+EAKKA ++ KIFVGGL+ + + + K +F QFG I
Sbjct: 74 MVEAKKAVPRDDQNILNRNSGGSIHSSPGPGRTKKIFVGGLASTVTENDFKNYFDQFGTI 133
Query: 212 IETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
I+ + YD + + + F FITF+ E V +L ++N K V+VK+A PK
Sbjct: 134 IDVVVMYDHNTQRPRGFGFITFDSEEAVDKVLMRTFHELNGKMVEVKRAVPK 185
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Query: 181 KAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVI 240
++ SGK+F+GG+S + +E +K +F FG ++E + D++ + + F F+ F +V
Sbjct: 2 QSDSGKLFIGGISWDTDEERLKGYFRSFGEVVEAVIMKDRTTGRARGFGFVVFADPAVAE 61
Query: 241 DLLKNPKQKINDKEVDVKKATPKPE 265
++K K I+ + V+ KKA P+ +
Sbjct: 62 RVIKE-KHSIDGRMVEAKKAVPRDD 85
Score = 43.5 bits (101), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 26/47 (55%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D E LK +F +GE+ + D TGR+RGF F+VF D E+
Sbjct: 16 DTDEERLKGYFRSFGEVVEAVIMKDRTTGRARGFGFVVFADPAVAER 62
Score = 42.7 bits (99), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 31/53 (58%)
Query: 445 IIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 497
II+ + YD + + + F FITF+ E V +L ++N K V+VK+A PK
Sbjct: 133 IIDVVVMYDHNTQRPRGFGFITFDSEEAVDKVLMRTFHELNGKMVEVKRAVPK 185
>gi|254579563|ref|XP_002495767.1| ZYRO0C02574p [Zygosaccharomyces rouxii]
gi|238938658|emb|CAR26834.1| ZYRO0C02574p [Zygosaccharomyces rouxii]
Length = 543
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 98/163 (60%), Gaps = 12/163 (7%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + TE+ L+++FSKYG + ++ + D NTGRSRGF F+ F + S+ D + +
Sbjct: 165 GLNWETTEDTLRDYFSKYGRVIDLKIMKDTNTGRSRGFGFLTFDSSSSV------DEVVK 218
Query: 166 GNHVINNKKIEAKKA-----KAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDK 220
H+++ K I+ K+A + K+GKIFVGG+ +++ +E + FAQ+G II+ ++ DK
Sbjct: 219 TQHILDGKVIDPKRAIPREEQDKTGKIFVGGIGADVRPKEFEEFFAQWGTIIDAQLMLDK 278
Query: 221 SKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ + F F+T++ V + +N K++++K+A P+
Sbjct: 279 DTGRSRGFGFVTYDSPDAVDRVCQNKFIDFKGKKIEIKRAEPR 321
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 52/80 (65%), Gaps = 1/80 (1%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+F+GGL+ E ++ ++ +F+++G +I+ ++ D + + + F F+TF+ S V +++K
Sbjct: 160 KMFIGGLNWETTEDTLRDYFSKYGRVIDLKIMKDTNTGRSRGFGFLTFDSSSSVDEVVKT 219
Query: 246 PKQKINDKEVDVKKATPKPE 265
+ ++ K +D K+A P+ E
Sbjct: 220 -QHILDGKVIDPKRAIPREE 238
Score = 46.6 bits (109), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 31/43 (72%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+ L+++FSKYG + ++ + D NTGRSRGF F+ F + S+++
Sbjct: 173 DTLRDYFSKYGRVIDLKIMKDTNTGRSRGFGFLTFDSSSSVDE 215
Score = 39.3 bits (90), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 30/48 (62%)
Query: 603 VDKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D +E +E F+++G I + L D +TGRSRGF F+ + +++++
Sbjct: 252 ADVRPKEFEEFFAQWGTIIDAQLMLDKDTGRSRGFGFVTYDSPDAVDR 299
>gi|321265756|ref|XP_003197594.1| subunit of cleavage factor I; Hrp1p [Cryptococcus gattii WM276]
gi|317464074|gb|ADV25807.1| Subunit of cleavage factor I, putative; Hrp1p [Cryptococcus gattii
WM276]
Length = 477
Score = 102 bits (255), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 97/163 (59%), Gaps = 13/163 (7%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + TE L E+ ++GEI+ T+ DP +GRSRGFAF+ ++D ASV V+A+
Sbjct: 118 GLNWETTEAGLSEYMGQFGEIDACTIMRDP-SGRSRGFAFLTYRD-----PASVTKVMAQ 171
Query: 166 GNHVINNKKIEAKKA-----KAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDK 220
+H ++ K+I+ K+A ++ K+FVGGL+P + E +K+ QFG +++ + +DK
Sbjct: 172 THH-LDGKQIDPKRAIPRAEHERTAKVFVGGLAPSVTGESLKSFLCQFGQVMDATVMFDK 230
Query: 221 SKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ K F F TF+ E V + ++ K++++KKA P+
Sbjct: 231 ETGRSKGFAFATFQDEESVGRAMAASGVELEGKQIEIKKAQPR 273
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 50/92 (54%), Gaps = 9/92 (9%)
Query: 107 GIVHKIT-EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ +T E LK ++G++ + T+ D TGRS+GFAF F+D ES+ +A +A
Sbjct: 201 GLAPSVTGESLKSFLCQFGQVMDATVMFDKETGRSKGFAFATFQDEESVGRA-----MAA 255
Query: 166 GNHVINNKKIEAKKAKAK---SGKIFVGGLSP 194
+ K+IE KKA+ + G F ++P
Sbjct: 256 SGVELEGKQIEIKKAQPRGTAQGSKFGANMNP 287
Score = 45.8 bits (107), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Query: 601 GIVDKIT-EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
G+ +T E LK ++G++ + T+ D TGRS+GFAF F+D ES+ +A
Sbjct: 201 GLAPSVTGESLKSFLCQFGQVMDATVMFDKETGRSKGFAFATFQDEESVGRA 252
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
Query: 610 LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
L E+ ++GEI+ T+ DP +GRSRGFAF+ ++D S+ K
Sbjct: 128 LSEYMGQFGEIDACTIMRDP-SGRSRGFAFLTYRDPASVTK 167
Score = 43.5 bits (101), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GK+F+GGL+ E + + + QFG I + D S R F F+T+ + V ++
Sbjct: 112 GKMFIGGLNWETTEAGLSEYMGQFGEIDACTIMRDPSGRSR-GFAFLTYRDPASVTKVMA 170
Query: 245 NPKQKINDKEVDVKKATPKPE 265
++ K++D K+A P+ E
Sbjct: 171 Q-THHLDGKQIDPKRAIPRAE 190
>gi|89257506|gb|ABD64996.1| RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) containing
protein [Brassica oleracea]
Length = 587
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 65/180 (36%), Positives = 92/180 (51%), Gaps = 29/180 (16%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
GI + TE+ L+E+F +GE+ + D TGR+RGF F+VF D E+ +
Sbjct: 12 GISWETTEDRLREYFQSFGEVLEAVIMKDRATGRARGFGFLVFSDPIVAER------VVF 65
Query: 166 GNHVINNKKIEAKKA----------------------KAKSGKIFVGGLSPEMKDEEIKA 203
HVI+ K +EAKKA A S KIFVGGL+ + + E K
Sbjct: 66 LRHVIDGKLVEAKKAVPRDDHVVLNKSYNTSLQGSPGPANSKKIFVGGLASSVTEAEFKK 125
Query: 204 HFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+FAQFG I + + YD + + F FI+FE E V +L+ ++N K V+VK A PK
Sbjct: 126 YFAQFGVITDVVVMYDHRTQRPRGFGFISFESEDAVDKVLQRTFHELNGKMVEVKLAVPK 185
Score = 42.7 bits (99), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKD 644
GI + TE+ L+E+F +GE+ + D TGR+RGF F+VF D
Sbjct: 12 GISWETTEDRLREYFQSFGEVLEAVIMKDRATGRARGFGFLVFSD 56
>gi|449463715|ref|XP_004149577.1| PREDICTED: uncharacterized protein LOC101220541 [Cucumis sativus]
gi|449517233|ref|XP_004165650.1| PREDICTED: uncharacterized protein LOC101224873 [Cucumis sativus]
Length = 480
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 88/171 (51%), Gaps = 27/171 (15%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
E L+E+F YGE+ + D TGR+RGF F+VF D E+ ++ HVI+ +
Sbjct: 20 ERLREYFGHYGEVVEAVIMRDRTTGRARGFGFVVFADPGVAERVILD------KHVIDGR 73
Query: 174 KIEAKKA---------------------KAKSGKIFVGGLSPEMKDEEIKAHFAQFGNII 212
+EAKKA ++ KIFVGGL+ + + + + +F QFG I
Sbjct: 74 TVEAKKAVPKDDQNMLNRSSGSIHGSPSSGRTKKIFVGGLASTVTEADFQKYFDQFGTIT 133
Query: 213 ETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ + YD S + + F FIT++ E V +L ++N K V+VK+A PK
Sbjct: 134 DVVVMYDHSTQRPRGFGFITYDSEECVDRVLHKTFHELNGKMVEVKRAIPK 184
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 48/85 (56%), Gaps = 9/85 (10%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEH----ESVVI 240
GK+F+GG+S + +E ++ +F +G ++E + D++ + + F F+ F E V++
Sbjct: 6 GKLFIGGISWDTDEERLREYFGHYGEVVEAVIMRDRTTGRARGFGFVVFADPGVAERVIL 65
Query: 241 DLLKNPKQKINDKEVDVKKATPKPE 265
D K I+ + V+ KKA PK +
Sbjct: 66 D-----KHVIDGRTVEAKKAVPKDD 85
Score = 46.2 bits (108), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 27/47 (57%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D E L+E+F YGE+ + D TGR+RGF F+VF D E+
Sbjct: 16 DTDEERLREYFGHYGEVVEAVIMRDRTTGRARGFGFVVFADPGVAER 62
>gi|156376666|ref|XP_001630480.1| predicted protein [Nematostella vectensis]
gi|156217502|gb|EDO38417.1| predicted protein [Nematostella vectensis]
Length = 305
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 96/166 (57%), Gaps = 13/166 (7%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ ++ T+E LKE+FSKYGE+ V +K D TGR RGFAF+ FK +S A + V
Sbjct: 35 GLSYETTKESLKEYFSKYGELVGVDIKMDALTGRPRGFAFVQFKH-QSEADAVLNQV--- 90
Query: 166 GNHVINNKKIEAKKAKA-------KSGKIFVGGLSPEMKDEEIKAHFAQ-FGNIIETEMP 217
HV++ + I+ K A + KIFVGGL PE DE+I+ +F + + + E E
Sbjct: 91 DPHVLDGRTIDPKPAAPIGKPPHLRVKKIFVGGLKPETSDEKIREYFGKAYAPVKEIEYI 150
Query: 218 YDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ S ++R+ FCF++F+ E V + + I +V+VK+A PK
Sbjct: 151 TEHSSNRRRGFCFVSFDSEDTVDKICETQFHNIEGNKVEVKRALPK 196
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GK+FVGGLS E E +K +F+++G ++ ++ D + + F F+ F+H+S +L
Sbjct: 29 GKLFVGGLSYETTKESLKEYFSKYGELVGVDIKMDALTGRPRGFAFVQFKHQSEADAVLN 88
Query: 245 NPKQKIND-KEVDVKKATPKPEPFGVR 270
+ D + +D K A P +P +R
Sbjct: 89 QVDPHVLDGRTIDPKPAAPIGKPPHLR 115
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/36 (63%), Positives = 27/36 (75%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFK 643
E LKE+FSKYGE+ V +K D TGR RGFAF+ FK
Sbjct: 43 ESLKEYFSKYGELVGVDIKMDALTGRPRGFAFVQFK 78
>gi|451993278|gb|EMD85752.1| hypothetical protein COCHEDRAFT_113051, partial [Cochliobolus
heterostrophus C5]
Length = 168
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 96/158 (60%), Gaps = 3/158 (1%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + TE+ LK +FS++GE+ T+ D TGRSRGF F+ FKD + + V++ +
Sbjct: 5 GLNWETTEDSLKGYFSQFGEVSECTVMRDSATGRSRGFGFLTFKDPKCVNIVMVKEHYLD 64
Query: 166 GNHVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQR 225
G +I+ K+ ++ + ++ KIFVGG+S E +E+ F QFG +++ + DK +
Sbjct: 65 G-KIIDPKRAIPREEQERTSKIFVGGVSQEATEEDFTNFFKQFGRVVDATLMMDKETGRP 123
Query: 226 KNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ F F+TF+ ++ V L+ P Q I K+++VK+A P+
Sbjct: 124 RGFGFVTFDGDAAVDATLRGPLQ-ILGKQIEVKRAQPR 160
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 187 IFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNP 246
+F+GGL+ E ++ +K +F+QFG + E + D + + + F F+TF+ V +++
Sbjct: 1 MFIGGLNWETTEDSLKGYFSQFGEVSECTVMRDSATGRSRGFGFLTFKDPKCV-NIVMVK 59
Query: 247 KQKINDKEVDVKKATPKPE 265
+ ++ K +D K+A P+ E
Sbjct: 60 EHYLDGKIIDPKRAIPREE 78
Score = 47.4 bits (111), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 32/51 (62%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYF 658
+ LK +FS++GE+ T+ D TGRSRGF F+ FKD + + V++ Y
Sbjct: 13 DSLKGYFSQFGEVSECTVMRDSATGRSRGFGFLTFKDPKCVNIVMVKEHYL 63
>gi|413954077|gb|AFW86726.1| hypothetical protein ZEAMMB73_661369 [Zea mays]
Length = 401
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 63/186 (33%), Positives = 98/186 (52%), Gaps = 18/186 (9%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + TEE +HF KYG I + + D +T RGF F+ F D SV D + E
Sbjct: 99 GVAWETTEETFTKHFQKYGAITDSVIMKDKHTRMPRGFGFVTFSD------PSVLDRVLE 152
Query: 166 GNHVINNKKIEAK---------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEM 216
HVI+ + +E K K K+ KIFVGG+ P + ++++K HF+ +G ++E ++
Sbjct: 153 DEHVIDGRTVEVKRTVPKELSSKDGPKTKKIFVGGIPPSLTEDKLKEHFSSYGKVVEHQI 212
Query: 217 PYDKSKSQRKNFCFITFEHESVVIDLLKNPK-QKINDKEVDVKKATPKPEPFGVRGGRGG 275
D S + + F F+TFE E V ++ + + K+V++KKA PK +P G
Sbjct: 213 MLDHSTGRSRGFGFVTFESEDAVERVMSEGRMHDLGGKQVEIKKAEPK-KPGAGDSSSNG 271
Query: 276 RGGRGG 281
R RGG
Sbjct: 272 RHSRGG 277
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Query: 184 SGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLL 243
SGK+FVGG++ E +E HF ++G I ++ + DK + F F+TF SV+ +L
Sbjct: 92 SGKVFVGGVAWETTEETFTKHFQKYGAITDSVIMKDKHTRMPRGFGFVTFSDPSVLDRVL 151
Query: 244 KNPKQKINDKEVDVKKATPK 263
++ + I+ + V+VK+ PK
Sbjct: 152 ED-EHVIDGRTVEVKRTVPK 170
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 593 KNKMVSHPGIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
K K + GI +TE+ LKEHFS YG++ + D +TGRSRGF F+ F+ +++E+
Sbjct: 179 KTKKIFVGGIPPSLTEDKLKEHFSSYGKVVEHQIMLDHSTGRSRGFGFVTFESEDAVERV 238
Query: 652 SVE 654
E
Sbjct: 239 MSE 241
Score = 38.9 bits (89), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPK-QKINDKEVDVKKATPKPEPFG 502
+++E ++ D S + + F F+TFE E V ++ + + K+V++KKA PK +P
Sbjct: 206 KVVEHQIMLDHSTGRSRGFGFVTFESEDAVERVMSEGRMHDLGGKQVEIKKAEPK-KPGA 264
Query: 503 VRGGRGGRGGRGG 515
GR RGG
Sbjct: 265 GDSSSNGRHSRGG 277
>gi|413943841|gb|AFW76490.1| hypothetical protein ZEAMMB73_698498 [Zea mays]
Length = 413
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 63/186 (33%), Positives = 97/186 (52%), Gaps = 20/186 (10%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + TEE +HF KYG I + + D +T RGF F+ F D SV D + E
Sbjct: 106 GVAWETTEETFTKHFQKYGAITDSVIMKDKHTRMPRGFGFVTFSD------PSVLDRVLE 159
Query: 166 GNHVINNKKIEAK----------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETE 215
HVI+ + +E K K K+ KIFVGG+ P + ++++K HF+ +G ++E +
Sbjct: 160 DEHVIDGRTVEVKRTVPKEEMSSKDGPKTKKIFVGGIPPSLTEDKLKEHFSSYGKVVEHQ 219
Query: 216 MPYDKSKSQRKNFCFITFEHESVVIDLLKNPK-QKINDKEVDVKKATPKPEPFG--VRGG 272
+ D S + + F F+TFE E V ++ + + K+V++KKA PK G G
Sbjct: 220 IMLDHSTGRSRGFGFVTFESEDAVERVMSEGRMHDLGGKQVEIKKAEPKKPGVGDSSSNG 279
Query: 273 RGGRGG 278
R RGG
Sbjct: 280 RHSRGG 285
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 49/82 (59%), Gaps = 1/82 (1%)
Query: 184 SGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLL 243
SGKIFVGG++ E +E HF ++G I ++ + DK + F F+TF SV+ +L
Sbjct: 99 SGKIFVGGVAWETTEETFTKHFQKYGAITDSVIMKDKHTRMPRGFGFVTFSDPSVLDRVL 158
Query: 244 KNPKQKINDKEVDVKKATPKPE 265
++ + I+ + V+VK+ PK E
Sbjct: 159 ED-EHVIDGRTVEVKRTVPKEE 179
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 593 KNKMVSHPGIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
K K + GI +TE+ LKEHFS YG++ + D +TGRSRGF F+ F+ +++E+
Sbjct: 187 KTKKIFVGGIPPSLTEDKLKEHFSSYGKVVEHQIMLDHSTGRSRGFGFVTFESEDAVERV 246
Query: 652 SVE 654
E
Sbjct: 247 MSE 249
Score = 38.9 bits (89), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPK-QKINDKEVDVKKATPKPEPFG 502
+++E ++ D S + + F F+TFE E V ++ + + K+V++KKA PK G
Sbjct: 214 KVVEHQIMLDHSTGRSRGFGFVTFESEDAVERVMSEGRMHDLGGKQVEIKKAEPKKPGVG 273
Query: 503 --VRGGRGGRGG 512
GR RGG
Sbjct: 274 DSSSNGRHSRGG 285
>gi|226503497|ref|NP_001145761.1| uncharacterized protein LOC100279268 [Zea mays]
gi|219884331|gb|ACL52540.1| unknown [Zea mays]
Length = 413
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 63/186 (33%), Positives = 97/186 (52%), Gaps = 20/186 (10%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + TEE +HF KYG I + + D +T RGF F+ F D SV D + E
Sbjct: 106 GVAWETTEETFTKHFQKYGAITDSVIMKDKHTRMPRGFGFVTFSD------PSVLDRVLE 159
Query: 166 GNHVINNKKIEAK----------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETE 215
HVI+ + +E K K K+ KIFVGG+ P + ++++K HF+ +G ++E +
Sbjct: 160 DEHVIDGRTVEVKRTVPKEEMSSKDGPKTKKIFVGGIPPSLTEDKLKEHFSSYGKVVEHQ 219
Query: 216 MPYDKSKSQRKNFCFITFEHESVVIDLLKNPK-QKINDKEVDVKKATPKPEPFG--VRGG 272
+ D S + + F F+TFE E V ++ + + K+V++KKA PK G G
Sbjct: 220 IMLDHSTGRSRGFGFVTFESEDAVERVMSEGRMHDLGGKQVEIKKAEPKKPGVGDSSSNG 279
Query: 273 RGGRGG 278
R RGG
Sbjct: 280 RHSRGG 285
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 49/82 (59%), Gaps = 1/82 (1%)
Query: 184 SGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLL 243
SGKIFVGG++ E +E HF ++G I ++ + DK + F F+TF SV+ +L
Sbjct: 99 SGKIFVGGVAWETTEETFTKHFQKYGAITDSVIMKDKHTRMPRGFGFVTFSDPSVLDRVL 158
Query: 244 KNPKQKINDKEVDVKKATPKPE 265
++ + I+ + V+VK+ PK E
Sbjct: 159 ED-EHVIDGRTVEVKRTVPKEE 179
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 593 KNKMVSHPGIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
K K + GI +TE+ LKEHFS YG++ + D +TGRSRGF F+ F+ +++E+
Sbjct: 187 KTKKIFVGGIPPSLTEDKLKEHFSSYGKVVEHQIMLDHSTGRSRGFGFVTFESEDAVERV 246
Query: 652 SVE 654
E
Sbjct: 247 MSE 249
Score = 38.9 bits (89), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPK-QKINDKEVDVKKATPKPEPFG 502
+++E ++ D S + + F F+TFE E V ++ + + K+V++KKA PK G
Sbjct: 214 KVVEHQIMLDHSTGRSRGFGFVTFESEDAVERVMSEGRMHDLGGKQVEIKKAEPKKPGVG 273
Query: 503 --VRGGRGGRGG 512
GR RGG
Sbjct: 274 DSSSNGRHSRGG 285
>gi|148909135|gb|ABR17668.1| unknown [Picea sitchensis]
Length = 411
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 77/233 (33%), Positives = 122/233 (52%), Gaps = 44/233 (18%)
Query: 97 EAKNKMVSHPGIV-------HKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFK 149
+ KN VS PG + + +HFSKYGE+ + + D TG+ RGF F+ +
Sbjct: 32 QEKNNDVSSPGKIFIGGLSRSTTSSAFTKHFSKYGELTDSVIMKDRLTGQPRGFGFVTYA 91
Query: 150 DTESLEKASVEDVIAEGNHVINNKKIEAKK-------AKA-KSGKIFVGGLSPEMKDEEI 201
D SV D + + H+++ K +E K+ +KA K+ K+FVGG+ + ++E
Sbjct: 92 D------PSVIDKVIQDKHILDGKTVEIKRTIPRGNSSKAPKTKKVFVGGIPTSITEDEF 145
Query: 202 KAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQ-KINDKEVDVKKA 260
K +F++FG ++E ++ D++ + + F FITFE E V +++ + ++ K+V++KKA
Sbjct: 146 KDYFSKFGKVVEHQIMQDRNTGRSRGFGFITFETEQAVEEIISQGRMLELGGKQVEIKKA 205
Query: 261 TP-KPEP-----FGVR-------GGRGGRG----GRGGRG-----GRMAGGYG 291
P KP P +GV GG GG G G GG G R AGGYG
Sbjct: 206 EPKKPLPDAGPIYGVDSRPPYIPGGVGGFGDSYNGFGGAGYGSNPYRSAGGYG 258
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 63/116 (54%), Gaps = 2/116 (1%)
Query: 149 KDTESLEKASVEDVIAEGNHVINNKKIEAKKAKAKS-GKIFVGGLSPEMKDEEIKAHFAQ 207
KD ++ + AS ED +E + ++ + K S GKIF+GGLS HF++
Sbjct: 5 KDQKTQDVASNEDGDSEREENVEEEQKQEKNNDVSSPGKIFIGGLSRSTTSSAFTKHFSK 64
Query: 208 FGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+G + ++ + D+ Q + F F+T+ SV+ ++++ K ++ K V++K+ P+
Sbjct: 65 YGELTDSVIMKDRLTGQPRGFGFVTYADPSVIDKVIQD-KHILDGKTVEIKRTIPR 119
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Query: 593 KNKMVSHPGIVDKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
K K V GI ITE E K++FSK+G++ + D NTGRSRGF FI F+ +++E+
Sbjct: 127 KTKKVFVGGIPTSITEDEFKDYFSKFGKVVEHQIMQDRNTGRSRGFGFITFETEQAVEE 185
Score = 43.9 bits (102), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 7/67 (10%)
Query: 591 EAKNKMVSHPGIV-------DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFK 643
+ KN VS PG + + +HFSKYGE+ + + D TG+ RGF F+ +
Sbjct: 32 QEKNNDVSSPGKIFIGGLSRSTTSSAFTKHFSKYGELTDSVIMKDRLTGQPRGFGFVTYA 91
Query: 644 DTESLEK 650
D ++K
Sbjct: 92 DPSVIDK 98
Score = 39.7 bits (91), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 55/105 (52%), Gaps = 23/105 (21%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQ-KINDKEVDVKKATPK-PEP- 500
+++E ++ D++ + + F FITFE E V +++ + ++ K+V++KKA PK P P
Sbjct: 154 KVVEHQIMQDRNTGRSRGFGFITFETEQAVEEIISQGRMLELGGKQVEIKKAEPKKPLPD 213
Query: 501 ----FGVR-------GGRGGRG----GRGGRGG-----RMAGGYG 525
+GV GG GG G G GG G R AGGYG
Sbjct: 214 AGPIYGVDSRPPYIPGGVGGFGDSYNGFGGAGYGSNPYRSAGGYG 258
>gi|242069255|ref|XP_002449904.1| hypothetical protein SORBIDRAFT_05g025410 [Sorghum bicolor]
gi|241935747|gb|EES08892.1| hypothetical protein SORBIDRAFT_05g025410 [Sorghum bicolor]
Length = 450
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 71/194 (36%), Positives = 97/194 (50%), Gaps = 29/194 (14%)
Query: 96 MEAKNKMVSHPGIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESL 154
MEA + GI E+ L ++F KYGE+E + D TGRSRGF FI+F D
Sbjct: 1 MEADAMKLFIGGISWDTNEDHLLKYFKKYGEVEEAIVMRDRATGRSRGFGFIMFAD---- 56
Query: 155 EKASVEDVIAEGNHVINNKKIEAKKAKAKSG---------------------KIFVGGLS 193
A + VI E H+I+ + +EAKKA A+ KIFVGGL+
Sbjct: 57 -PAVAKHVIME-KHMIDGRMVEAKKAIARDDHHSLNNIHGSAHGLQRPKHRKKIFVGGLA 114
Query: 194 PEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDK 253
+ E++ HF QFG II+ + YD + + F FIT++ E V L QK+ K
Sbjct: 115 SNVTKEDVIKHFKQFGTIIDVVVVYDHHTQRPRGFGFITYDSEDAVHRALIKTFQKLKGK 174
Query: 254 EVDVKKATPK-PEP 266
V+VK+A K P P
Sbjct: 175 MVEVKRAIRKEPSP 188
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 26/41 (63%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKD 644
D + L ++F KYGE+E + D TGRSRGF FI+F D
Sbjct: 16 DTNEDHLLKYFKKYGEVEEAIVMRDRATGRSRGFGFIMFAD 56
>gi|255582445|ref|XP_002532010.1| Heterogeneous nuclear ribonucleoprotein 27C, putative [Ricinus
communis]
gi|223528341|gb|EEF30383.1| Heterogeneous nuclear ribonucleoprotein 27C, putative [Ricinus
communis]
Length = 484
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 98/197 (49%), Gaps = 32/197 (16%)
Query: 96 MEAKNKMVSHPGIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESL 154
M++ N + GI EE LKE+F +GE+ + D TGR+RGF F+VF D
Sbjct: 1 MQSDNGKLFIGGISWDTNEERLKEYFGSFGEVVEAVIMKDRTTGRARGFGFVVFADA--- 57
Query: 155 EKASVEDVIAEGNHVINNKKIEAKKA----------------------KAKSGKIFVGGL 192
A E VI E H I+ + +EAKKA ++ KIFVGGL
Sbjct: 58 --AVAERVIME-KHNIDGRMVEAKKAVPRDDQNILNRSTGSSIHGSPGPGRTRKIFVGGL 114
Query: 193 SPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKIND 252
+ + + + + +F Q+G I + + YD + + + F FIT++ E V +L ++N
Sbjct: 115 ASTVTETDFRKYFEQYGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDKVLMKTFHELNG 174
Query: 253 KEVDVKKATPK---PEP 266
K V+VK+A PK P P
Sbjct: 175 KMVEVKRAVPKELSPGP 191
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 29/51 (56%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVE 654
D E LKE+F +GE+ + D TGR+RGF F+VF D E+ +E
Sbjct: 16 DTNEERLKEYFGSFGEVVEAVIMKDRTTGRARGFGFVVFADAAVAERVIME 66
Score = 42.7 bits (99), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 601 GIVDKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
G+ +TE + +++F +YG I +V + D NT R RGF FI + E+++K
Sbjct: 113 GLASTVTETDFRKYFEQYGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDK 163
Score = 39.7 bits (91), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 445 IIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK---PEP 500
I + + YD + + + F FIT++ E V +L ++N K V+VK+A PK P P
Sbjct: 133 ITDVVVMYDHNTQRPRGFGFITYDSEEAVDKVLMKTFHELNGKMVEVKRAVPKELSPGP 191
>gi|255574661|ref|XP_002528240.1| Heterogeneous nuclear ribonucleoprotein 27C, putative [Ricinus
communis]
gi|223532357|gb|EEF34155.1| Heterogeneous nuclear ribonucleoprotein 27C, putative [Ricinus
communis]
Length = 456
Score = 102 bits (253), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 89/172 (51%), Gaps = 28/172 (16%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+ L+E+F +GE+ + D TGR+RGF F+VF D E+ +E H+I+ +
Sbjct: 20 DRLREYFQVFGEVMEAVIMKDRATGRARGFGFVVFADPAVAERVVMEK------HLIDGR 73
Query: 174 KIEAKKA----------------------KAKSGKIFVGGLSPEMKDEEIKAHFAQFGNI 211
+EAKKA A++ KIFVGGL+ + + + K +F QFG I
Sbjct: 74 NVEAKKAVPREDQNILNRNSSSSIHGSPSPARTKKIFVGGLASTVTESDFKKYFDQFGTI 133
Query: 212 IETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ + YD + + + F FIT++ E V +L ++N K V+VK+A PK
Sbjct: 134 TDVVVMYDHNTQRPRGFGFITYDSEEAVDKVLHKTFHELNGKMVEVKRAVPK 185
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GK+F+GG+S + ++ ++ +F FG ++E + D++ + + F F+ F +V ++
Sbjct: 6 GKLFIGGISWDTNEDRLREYFQVFGEVMEAVIMKDRATGRARGFGFVVFADPAVAERVVM 65
Query: 245 NPKQKINDKEVDVKKATPK 263
K I+ + V+ KKA P+
Sbjct: 66 E-KHLIDGRNVEAKKAVPR 83
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 29/51 (56%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVE 654
D + L+E+F +GE+ + D TGR+RGF F+VF D E+ +E
Sbjct: 16 DTNEDRLREYFQVFGEVMEAVIMKDRATGRARGFGFVVFADPAVAERVVME 66
Score = 38.9 bits (89), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 30/53 (56%)
Query: 445 IIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 497
I + + YD + + + F FIT++ E V +L ++N K V+VK+A PK
Sbjct: 133 ITDVVVMYDHNTQRPRGFGFITYDSEEAVDKVLHKTFHELNGKMVEVKRAVPK 185
>gi|297804878|ref|XP_002870323.1| hypothetical protein ARALYDRAFT_493480 [Arabidopsis lyrata subsp.
lyrata]
gi|297316159|gb|EFH46582.1| hypothetical protein ARALYDRAFT_493480 [Arabidopsis lyrata subsp.
lyrata]
Length = 407
Score = 102 bits (253), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 92/175 (52%), Gaps = 31/175 (17%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++L+EHFS YGE+ + D TGR RGF F++F D SV D + + H I+ +
Sbjct: 20 DKLREHFSNYGEVSQAIVMRDKLTGRPRGFGFVIFSD------PSVLDRVLQDKHNIDTR 73
Query: 174 KIEAKKAKA-------------------------KSGKIFVGGLSPEMKDEEIKAHFAQF 208
+++ K+A + K+ KIFVGGL P + DEE + +F +
Sbjct: 74 EVDVKRAMSREEQQVSGRTGNLNTSRSSGGDSFNKTKKIFVGGLPPTLTDEEFRQYFEVY 133
Query: 209 GNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
G + + + YD++ ++ + F F++F+ E V +L ++ K+V+VK+A PK
Sbjct: 134 GPVTDVAIMYDQATNRPRGFGFVSFDSEDAVDRVLHKTFHDLSGKQVEVKRALPK 188
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 52/84 (61%), Gaps = 1/84 (1%)
Query: 182 AKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVID 241
+ GK+FVGG+S E +++++ HF+ +G + + + DK + + F F+ F SV+
Sbjct: 3 SDQGKLFVGGVSWETDEDKLREHFSNYGEVSQAIVMRDKLTGRPRGFGFVIFSDPSVLDR 62
Query: 242 LLKNPKQKINDKEVDVKKATPKPE 265
+L++ K I+ +EVDVK+A + E
Sbjct: 63 VLQD-KHNIDTREVDVKRAMSREE 85
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 28/43 (65%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
++L+EHFS YGE+ + D TGR RGF F++F D L++
Sbjct: 20 DKLREHFSNYGEVSQAIVMRDKLTGRPRGFGFVIFSDPSVLDR 62
>gi|291233795|ref|XP_002736841.1| PREDICTED: heterogeneous nuclear ribonucleoprotein at 27C-like
[Saccoglossus kowalevskii]
Length = 540
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 86/165 (52%), Gaps = 20/165 (12%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+ L++HF KYGE+ + + DP T RSRGF F+ FKD V+ +A H+++ +
Sbjct: 22 DSLQKHFMKYGEVIDCVIMKDPITQRSRGFGFVKFKD-----PVCVQTALAGAPHILDGR 76
Query: 174 KIEAKKAKAKSG---------------KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPY 218
I+ K +S K+F+GG+ P +++I F+QFG + E M Y
Sbjct: 77 TIDPKPCTPRSQQQKTQQMGQFSGRVKKVFIGGIPPNCNEDDINNFFSQFGQVTEFIMMY 136
Query: 219 DKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
D+ + + + F F++FE E +V + IN K V+ KKA P+
Sbjct: 137 DQQQKRPRGFGFLSFESEDIVEKVCTIRYHTINGKTVECKKAEPR 181
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 41/79 (51%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GKIFVGGLS E + ++ HF ++G +I+ + D + + F F+ F+ V L
Sbjct: 8 GKIFVGGLSWESTQDSLQKHFMKYGEVIDCVIMKDPITQRSRGFGFVKFKDPVCVQTALA 67
Query: 245 NPKQKINDKEVDVKKATPK 263
++ + +D K TP+
Sbjct: 68 GAPHILDGRTIDPKPCTPR 86
Score = 47.8 bits (112), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 30/48 (62%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
+ + L++HF KYGE+ + + DP T RSRGF F+ FKD ++ A
Sbjct: 18 ESTQDSLQKHFMKYGEVIDCVIMKDPITQRSRGFGFVKFKDPVCVQTA 65
>gi|414591910|tpg|DAA42481.1| TPA: hypothetical protein ZEAMMB73_522608 [Zea mays]
Length = 449
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 94/181 (51%), Gaps = 28/181 (15%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
GI + +E+ L+E+F ++GE+ + D +TGR+RGF F+VF D E+ + E
Sbjct: 13 GISWETSEDRLREYFGRFGEVTEAVIMRDRSTGRARGFGFVVFADAAVAERVTTEK---- 68
Query: 166 GNHVINNKKIEAKKA---------------------KAKSGKIFVGGLSPEMKDEEIKAH 204
H+I+ + +EAKKA ++ KIFVGGL + + + + +
Sbjct: 69 --HMIDGRMVEAKKAVPRDDHSIVTKSNASSIGSPGPGRTRKIFVGGLPSNVTEADFRRY 126
Query: 205 FAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKP 264
F QFG I + + YD + + + F FIT++ E V L ++N K V+VK+A PK
Sbjct: 127 FEQFGVITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALHKSFHELNGKMVEVKRAVPKE 186
Query: 265 E 265
+
Sbjct: 187 Q 187
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 182 AKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVID 241
A GK+FVGG+S E ++ ++ +F +FG + E + D+S + + F F+ F ++ V +
Sbjct: 4 ADHGKLFVGGISWETSEDRLREYFGRFGEVTEAVIMRDRSTGRARGFGFVVFA-DAAVAE 62
Query: 242 LLKNPKQKINDKEVDVKKATPK 263
+ K I+ + V+ KKA P+
Sbjct: 63 RVTTEKHMIDGRMVEAKKAVPR 84
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 30/47 (63%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVE 654
+ L+E+F ++GE+ + D +TGR+RGF F+VF D E+ + E
Sbjct: 21 DRLREYFGRFGEVTEAVIMRDRSTGRARGFGFVVFADAAVAERVTTE 67
Score = 40.4 bits (93), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 601 GIVDKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
G+ +TE + + +F ++G I +V + D NT R RGF FI + ++++KA
Sbjct: 113 GLPSNVTEADFRRYFEQFGVITDVVVMYDHNTQRPRGFGFITYDSEDAVDKA 164
Score = 38.9 bits (89), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 30/55 (54%)
Query: 445 IIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE 499
I + + YD + + + F FIT++ E V L ++N K V+VK+A PK +
Sbjct: 133 ITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALHKSFHELNGKMVEVKRAVPKEQ 187
>gi|79325275|ref|NP_001031725.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332659833|gb|AEE85233.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 452
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 89/178 (50%), Gaps = 34/178 (19%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
E L+E+F KYG++ + D TGR+RGF FIVF D E+ ++ H+I+ +
Sbjct: 26 ERLQEYFGKYGDLVEAVIMRDRTTGRARGFGFIVFADPSVAERVIMDK------HIIDGR 79
Query: 174 KIEAKKA----------------------------KAKSGKIFVGGLSPEMKDEEIKAHF 205
+EAKKA A++ KIFVGGL + + E K +F
Sbjct: 80 TVEAKKAVPRDDQQVLKRHASPMHLISPSHGGNGGGARTKKIFVGGLPSSITEAEFKNYF 139
Query: 206 AQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
QFG I + + YD + + + F FITF+ E V +L ++N K V+VK+A PK
Sbjct: 140 DQFGTIADVVVMYDHNTQRPRGFGFITFDSEESVDMVLHKTFHELNGKMVEVKRAVPK 197
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GK+F+GG+S + +E ++ +F ++G+++E + D++ + + F FI F SV ++
Sbjct: 12 GKLFIGGISWDTDEERLQEYFGKYGDLVEAVIMRDRTTGRARGFGFIVFADPSVAERVIM 71
Query: 245 NPKQKINDKEVDVKKATPKPE 265
+ K I+ + V+ KKA P+ +
Sbjct: 72 D-KHIIDGRTVEAKKAVPRDD 91
Score = 47.0 bits (110), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 28/47 (59%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D E L+E+F KYG++ + D TGR+RGF FIVF D E+
Sbjct: 22 DTDEERLQEYFGKYGDLVEAVIMRDRTTGRARGFGFIVFADPSVAER 68
>gi|326494758|dbj|BAJ94498.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 494
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 101/195 (51%), Gaps = 28/195 (14%)
Query: 96 MEAKNKMVSHPGIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESL 154
MEA + + GI + E+ L+++F ++GE+ + D NTGR+RGF FIVF +
Sbjct: 24 MEADSGKLFVGGISWETDEDRLRDYFGRFGEVTEAVIMRDRNTGRARGFGFIVFAEAGVA 83
Query: 155 EKASVEDVIAEGNHVINNKKIEAKKA---------------------KAKSGKIFVGGLS 193
E+ +++ H+I+ + +EAKKA ++ KIFVGGL+
Sbjct: 84 ERVTMDK------HMIDGRMVEAKKAVPRDDQSIASKNNGSSIGSPGPVRTRKIFVGGLA 137
Query: 194 PEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDK 253
+ + E + +F QFG I + + YD + + + F FIT++ E V L ++N K
Sbjct: 138 SNVTEVEFRRYFEQFGMITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALHKNFHELNGK 197
Query: 254 EVDVKKATPKPEPFG 268
V+VK+A PK + G
Sbjct: 198 MVEVKRAVPKEQSPG 212
Score = 47.0 bits (110), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 31/47 (65%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVE 654
+ L+++F ++GE+ + D NTGR+RGF FIVF + E+ +++
Sbjct: 43 DRLRDYFGRFGEVTEAVIMRDRNTGRARGFGFIVFAEAGVAERVTMD 89
Score = 42.7 bits (99), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 601 GIVDKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
G+ +TE E + +F ++G I +V + D NT R RGF FI + ++++KA
Sbjct: 135 GLASNVTEVEFRRYFEQFGMITDVVVMYDHNTQRPRGFGFITYDSEDAVDKA 186
>gi|196001955|ref|XP_002110845.1| hypothetical protein TRIADDRAFT_54175 [Trichoplax adhaerens]
gi|190586796|gb|EDV26849.1| hypothetical protein TRIADDRAFT_54175 [Trichoplax adhaerens]
Length = 310
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 101/200 (50%), Gaps = 19/200 (9%)
Query: 113 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINN 172
++ +K+ F+KYG + + +K DP T RSRGF F+ F+D V V+ G H+++
Sbjct: 21 SDSMKKFFNKYGNVSDCVIKKDPVTQRSRGFGFVTFED-----PGCVNSVLNAGPHLLDG 75
Query: 173 KKIEAKKAKAK-------------SGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYD 219
K+I+ K A K + K+F+GG++ ++EIK +F+ FG + ++ YD
Sbjct: 76 KQIDPKPAVQKGQPAPQASPSNVNTNKVFIGGVAQNTSEDEIKKYFSSFGQVKNVQLMYD 135
Query: 220 KSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGVRGGRGG-RGG 278
K+ + + F F+TFE++ V IN K V+VK A + GV G + GG
Sbjct: 136 KTTKRMRGFGFVTFENDETVKKTCGVHFHNINGKSVEVKLAEDRSANRGVPGSQSNVYGG 195
Query: 279 RGGRGGRMAGGYGGYGGYGG 298
+ YG YG GG
Sbjct: 196 GNFPNMQFTSQYGPYGNSGG 215
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 45/83 (54%)
Query: 184 SGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLL 243
+GKIFVGGL P+ + +K F ++GN+ + + D + + F F+TFE V +L
Sbjct: 7 TGKIFVGGLHPDTDSDSMKKFFNKYGNVSDCVIKKDPVTQRSRGFGFVTFEDPGCVNSVL 66
Query: 244 KNPKQKINDKEVDVKKATPKPEP 266
++ K++D K A K +P
Sbjct: 67 NAGPHLLDGKQIDPKPAVQKGQP 89
Score = 47.0 bits (110), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 30/46 (65%), Gaps = 3/46 (6%)
Query: 599 HPGIVDKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKD 644
HP D ++ +K+ F+KYG + + +K DP T RSRGF F+ F+D
Sbjct: 16 HP---DTDSDSMKKFFNKYGNVSDCVIKKDPVTQRSRGFGFVTFED 58
Score = 46.6 bits (109), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Query: 601 GIVDKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
G+ +E E+K++FS +G+++NV L D T R RGF F+ F++ E+++K
Sbjct: 107 GVAQNTSEDEIKKYFSSFGQVKNVQLMYDKTTKRMRGFGFVTFENDETVKKT 158
>gi|410077429|ref|XP_003956296.1| hypothetical protein KAFR_0C01680 [Kazachstania africana CBS 2517]
gi|372462880|emb|CCF57161.1| hypothetical protein KAFR_0C01680 [Kazachstania africana CBS 2517]
Length = 479
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 99/163 (60%), Gaps = 12/163 (7%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + TEE L+++F+KYG + ++ + D NTGRSRGF F+ F E S D + +
Sbjct: 100 GLNWETTEETLRDYFNKYGHVTDLKIMKDSNTGRSRGFGFLTF------EHPSSVDEVVK 153
Query: 166 GNHVINNKKIEAKKA-----KAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDK 220
H+++ K I+ K++ + K+GKIFVGG+ +++ +E + F+Q+GNII+ ++ DK
Sbjct: 154 TQHILDGKVIDPKRSIPREEQDKTGKIFVGGIGADVRPKEFEEFFSQYGNIIDAQLMLDK 213
Query: 221 SKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ + F F+T++ V + ++ + K++++K+A P+
Sbjct: 214 DTGRSRGFGFVTYDSPDAVDRVCQSKYIEFKGKQIEIKRAQPR 256
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 52/80 (65%), Gaps = 1/80 (1%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+F+GGL+ E +E ++ +F ++G++ + ++ D + + + F F+TFEH S V +++K
Sbjct: 95 KMFIGGLNWETTEETLRDYFNKYGHVTDLKIMKDSNTGRSRGFGFLTFEHPSSVDEVVKT 154
Query: 246 PKQKINDKEVDVKKATPKPE 265
+ ++ K +D K++ P+ E
Sbjct: 155 -QHILDGKVIDPKRSIPREE 173
Score = 46.2 bits (108), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 31/43 (72%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
E L+++F+KYG + ++ + D NTGRSRGF F+ F+ S+++
Sbjct: 108 ETLRDYFNKYGHVTDLKIMKDSNTGRSRGFGFLTFEHPSSVDE 150
Score = 42.4 bits (98), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 30/48 (62%)
Query: 603 VDKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D +E +E FS+YG I + L D +TGRSRGF F+ + +++++
Sbjct: 187 ADVRPKEFEEFFSQYGNIIDAQLMLDKDTGRSRGFGFVTYDSPDAVDR 234
>gi|22328624|ref|NP_193166.2| ribonucleoprotein 1 [Arabidopsis thaliana]
gi|18152698|emb|CAC83517.1| ribonucleoprotein 1 [Arabidopsis thaliana]
gi|110740752|dbj|BAE98475.1| ribonucleoprotein like protein [Arabidopsis thaliana]
gi|332658011|gb|AEE83411.1| ribonucleoprotein 1 [Arabidopsis thaliana]
Length = 411
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 92/175 (52%), Gaps = 31/175 (17%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++L+EHF+ YGE+ + D TGR RGF F++F D SV D + + H I+ +
Sbjct: 20 DKLREHFTNYGEVSQAIVMRDKLTGRPRGFGFVIFSD------PSVLDRVLQEKHSIDTR 73
Query: 174 KIEAKKAKA-------------------------KSGKIFVGGLSPEMKDEEIKAHFAQF 208
+++ K+A + K+ KIFVGGL P + DEE + +F +
Sbjct: 74 EVDVKRAMSREEQQVSGRTGNLNTSRSSGGDAYNKTKKIFVGGLPPTLTDEEFRQYFEVY 133
Query: 209 GNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
G + + + YD++ ++ + F F++F+ E V +L ++ K+V+VK+A PK
Sbjct: 134 GPVTDVAIMYDQATNRPRGFGFVSFDSEDAVDSVLHKTFHDLSGKQVEVKRALPK 188
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Query: 182 AKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVID 241
+ GK+FVGG+S E +++++ HF +G + + + DK + + F F+ F SV+
Sbjct: 3 SDQGKLFVGGISWETDEDKLREHFTNYGEVSQAIVMRDKLTGRPRGFGFVIFSDPSVLDR 62
Query: 242 LLKNPKQKINDKEVDVKKATPKPE 265
+L+ K I+ +EVDVK+A + E
Sbjct: 63 VLQE-KHSIDTREVDVKRAMSREE 85
Score = 47.4 bits (111), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 28/43 (65%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
++L+EHF+ YGE+ + D TGR RGF F++F D L++
Sbjct: 20 DKLREHFTNYGEVSQAIVMRDKLTGRPRGFGFVIFSDPSVLDR 62
>gi|4938503|emb|CAB43861.1| hnRNP-like protein [Arabidopsis thaliana]
gi|7269517|emb|CAB79520.1| hnRNP-like protein [Arabidopsis thaliana]
Length = 524
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/178 (34%), Positives = 89/178 (50%), Gaps = 34/178 (19%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
E L+E+F KYG++ + D TGR+RGF FIVF D SV + + H+I+ +
Sbjct: 22 ERLQEYFGKYGDLVEAVIMRDRTTGRARGFGFIVFAD------PSVAERVIMDKHIIDGR 75
Query: 174 KIEAKKA----------------------------KAKSGKIFVGGLSPEMKDEEIKAHF 205
+EAKKA A++ KIFVGGL + + E K +F
Sbjct: 76 TVEAKKAVPRDDQQVLKRHASPMHLISPSHGGNGGGARTKKIFVGGLPSSITEAEFKNYF 135
Query: 206 AQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
QFG I + + YD + + + F FITF+ E V +L ++N K V+VK+A PK
Sbjct: 136 DQFGTIADVVVMYDHNTQRPRGFGFITFDSEESVDMVLHKTFHELNGKMVEVKRAVPK 193
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GK+F+GG+S + +E ++ +F ++G+++E + D++ + + F FI F SV ++
Sbjct: 8 GKLFIGGISWDTDEERLQEYFGKYGDLVEAVIMRDRTTGRARGFGFIVFADPSVAERVIM 67
Query: 245 NPKQKINDKEVDVKKATPKPE 265
+ K I+ + V+ KKA P+ +
Sbjct: 68 D-KHIIDGRTVEAKKAVPRDD 87
Score = 47.0 bits (110), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 28/47 (59%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D E L+E+F KYG++ + D TGR+RGF FIVF D E+
Sbjct: 18 DTDEERLQEYFGKYGDLVEAVIMRDRTTGRARGFGFIVFADPSVAER 64
>gi|18416794|ref|NP_567753.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|16930503|gb|AAL31937.1|AF419605_1 AT4g26650/T15N24_100 [Arabidopsis thaliana]
gi|20453245|gb|AAM19861.1| AT4g26650/T15N24_100 [Arabidopsis thaliana]
gi|332659832|gb|AEE85232.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 455
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 89/178 (50%), Gaps = 34/178 (19%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
E L+E+F KYG++ + D TGR+RGF FIVF D E+ ++ H+I+ +
Sbjct: 29 ERLQEYFGKYGDLVEAVIMRDRTTGRARGFGFIVFADPSVAERVIMDK------HIIDGR 82
Query: 174 KIEAKKA----------------------------KAKSGKIFVGGLSPEMKDEEIKAHF 205
+EAKKA A++ KIFVGGL + + E K +F
Sbjct: 83 TVEAKKAVPRDDQQVLKRHASPMHLISPSHGGNGGGARTKKIFVGGLPSSITEAEFKNYF 142
Query: 206 AQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
QFG I + + YD + + + F FITF+ E V +L ++N K V+VK+A PK
Sbjct: 143 DQFGTIADVVVMYDHNTQRPRGFGFITFDSEESVDMVLHKTFHELNGKMVEVKRAVPK 200
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 56/92 (60%), Gaps = 3/92 (3%)
Query: 176 EAKKAKAKS--GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
E +K ++ S GK+F+GG+S + +E ++ +F ++G+++E + D++ + + F FI F
Sbjct: 4 EEQKMESASDLGKLFIGGISWDTDEERLQEYFGKYGDLVEAVIMRDRTTGRARGFGFIVF 63
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKATPKPE 265
SV ++ + K I+ + V+ KKA P+ +
Sbjct: 64 ADPSVAERVIMD-KHIIDGRTVEAKKAVPRDD 94
Score = 47.0 bits (110), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 28/47 (59%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D E L+E+F KYG++ + D TGR+RGF FIVF D E+
Sbjct: 25 DTDEERLQEYFGKYGDLVEAVIMRDRTTGRARGFGFIVFADPSVAER 71
>gi|324511674|gb|ADY44854.1| RNA-binding protein Musashi Rbp6 [Ascaris suum]
Length = 345
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/160 (35%), Positives = 90/160 (56%), Gaps = 14/160 (8%)
Query: 113 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINN 172
E L+++F K+GE+ + DP T R+RGF FI F D ASVE V+A H ++
Sbjct: 57 AEGLRDYFGKFGEVNECMVMRDPATKRARGFGFITFADP-----ASVEKVLAHDQHELDG 111
Query: 173 KKIEAK---------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKS 223
KKI+ K K K+ K+F+GGLS E+++ +F Q+G + + + +DK+
Sbjct: 112 KKIDPKVAFPKRAQPKMIIKTKKVFIGGLSATSTLEDMRNYFEQYGKVEDAMLMFDKTTQ 171
Query: 224 QRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ + F FITF+++ V + + +IN K V+ KKA PK
Sbjct: 172 RHRGFGFITFDNDDVSDKVCEIHFHEINGKMVECKKAQPK 211
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 47/79 (59%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GK+F+GGLS + E ++ +F +FG + E + D + + + F FITF + V +L
Sbjct: 44 GKMFIGGLSWQTTAEGLRDYFGKFGEVNECMVMRDPATKRARGFGFITFADPASVEKVLA 103
Query: 245 NPKQKINDKEVDVKKATPK 263
+ + +++ K++D K A PK
Sbjct: 104 HDQHELDGKKIDPKVAFPK 122
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 29/49 (59%)
Query: 607 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVED 655
E L+++F K+GE+ + DP T R+RGF FI F D S+EK D
Sbjct: 57 AEGLRDYFGKFGEVNECMVMRDPATKRARGFGFITFADPASVEKVLAHD 105
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 33/52 (63%), Gaps = 2/52 (3%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFY 659
E+++ +F +YG++E+ L D T R RGF FI F + + +K V +++F+
Sbjct: 147 EDMRNYFEQYGKVEDAMLMFDKTTQRHRGFGFITFDNDDVSDK--VCEIHFH 196
>gi|148907387|gb|ABR16827.1| unknown [Picea sitchensis]
Length = 432
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 96/177 (54%), Gaps = 26/177 (14%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
GI + TEE LKE+F YG++ + D TGR+RGF FI F + ++++ + +
Sbjct: 12 GISWETTEETLKEYFKVYGDVVETVIMRDKMTGRARGFGFIGFSEPTAVDR------VLQ 65
Query: 166 GNHVINNKKIEAKKA---------KAKSG----------KIFVGGLSPEMKDEEIKAHFA 206
H I+ +++E K+A KSG KIFVGGL+P + +++ K +F
Sbjct: 66 DKHTIDGRQVELKRAVPREEHQRNAQKSGSNVGAGPRTKKIFVGGLAPTVTEDDFKGYFE 125
Query: 207 QFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
QFG I + + YD + + F FITF+ E V ++ +++DK V+VK+A PK
Sbjct: 126 QFGTITDVVVMYDHISQRPRGFGFITFDSEEAVDKVVMKNFHELHDKTVEVKRALPK 182
Score = 42.4 bits (98), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
GI + TEE LKE+F YG++ + D TGR+RGF FI F + ++++
Sbjct: 12 GISWETTEETLKEYFKVYGDVVETVIMRDKMTGRARGFGFIGFSEPTAVDR 62
>gi|297803432|ref|XP_002869600.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
gi|297315436|gb|EFH45859.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
Length = 455
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 89/178 (50%), Gaps = 34/178 (19%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
E L+E+F KYG++ + D TGR+RGF FIVF D E+ ++ H+I+ +
Sbjct: 29 ERLQEYFGKYGDLVEAVIMRDRTTGRARGFGFIVFADPSVAERVIMDK------HIIDGR 82
Query: 174 KIEAKKA----------------------------KAKSGKIFVGGLSPEMKDEEIKAHF 205
+EAKKA A++ KIFVGGL + + E K +F
Sbjct: 83 TVEAKKAVPRDDQQVLKRHASPMHLISPSHGGNGGGARTKKIFVGGLPSSITEAEFKNYF 142
Query: 206 AQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
QFG I + + YD + + + F FITF+ E V +L ++N K V+VK+A PK
Sbjct: 143 DQFGTIADVVVMYDHNTQRPRGFGFITFDSEESVDMVLHKTFHELNGKMVEVKRAVPK 200
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 57/94 (60%), Gaps = 3/94 (3%)
Query: 174 KIEAKKAKAKS--GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFI 231
+E +K ++ S GK+F+GG+S + +E ++ +F ++G+++E + D++ + + F FI
Sbjct: 2 NLEEQKMESASDLGKLFIGGISWDTDEERLQEYFGKYGDLVEAVIMRDRTTGRARGFGFI 61
Query: 232 TFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE 265
F SV ++ + K I+ + V+ KKA P+ +
Sbjct: 62 VFADPSVAERVIMD-KHIIDGRTVEAKKAVPRDD 94
Score = 47.0 bits (110), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 28/47 (59%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D E L+E+F KYG++ + D TGR+RGF FIVF D E+
Sbjct: 25 DTDEERLQEYFGKYGDLVEAVIMRDRTTGRARGFGFIVFADPSVAER 71
>gi|353230165|emb|CCD76336.1| rna-binding protein musashi-related [Schistosoma mansoni]
Length = 346
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 89/162 (54%), Gaps = 16/162 (9%)
Query: 113 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINN 172
+E L+++F KYGE+ + DP T RSRGF FI F D VE V+ H+++
Sbjct: 91 SEGLRDYFQKYGELREYMIMRDPLTKRSRGFGFITFSD-----PVCVEKVLETAPHILDY 145
Query: 173 KKIEAK-----------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKS 221
KKI+ K K K+ ++F+GG++ + +EE+ +F+QFG + E+ DKS
Sbjct: 146 KKIDPKLAVPRKSGQNTKVSTKTKRVFIGGVATQTTNEELSEYFSQFGKLESCELMMDKS 205
Query: 222 KSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
++ + F F+TFE E + + +++K V+ KKA PK
Sbjct: 206 TNRHRGFGFVTFESEESAEKVCEIHFHDLHNKMVEAKKAVPK 247
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 44/71 (61%), Gaps = 3/71 (4%)
Query: 590 VEAKNKMVSHPGIVDKIT-EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESL 648
V K K V G+ + T EEL E+FS++G++E+ L D +T R RGF F+ F+ ES
Sbjct: 164 VSTKTKRVFIGGVATQTTNEELSEYFSQFGKLESCELMMDKSTNRHRGFGFVTFESEESA 223
Query: 649 EKASVEDVYFY 659
EK V +++F+
Sbjct: 224 EK--VCEIHFH 232
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 46/89 (51%)
Query: 175 IEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFE 234
IE+ GK+F+GGLSP E ++ +F ++G + E + D + + F FITF
Sbjct: 68 IESTADSNDPGKMFIGGLSPTTTSEGLRDYFQKYGELREYMIMRDPLTKRSRGFGFITFS 127
Query: 235 HESVVIDLLKNPKQKINDKEVDVKKATPK 263
V +L+ ++ K++D K A P+
Sbjct: 128 DPVCVEKVLETAPHILDYKKIDPKLAVPR 156
Score = 47.0 bits (110), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 28/45 (62%)
Query: 607 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
+E L+++F KYGE+ + DP T RSRGF FI F D +EK
Sbjct: 91 SEGLRDYFQKYGELREYMIMRDPLTKRSRGFGFITFSDPVCVEKV 135
>gi|19111886|ref|NP_595094.1| mRNA cleavage factor complex subunit (predicted)
[Schizosaccharomyces pombe 972h-]
gi|74676196|sp|O94432.1|YHKF_SCHPO RecName: Full=Uncharacterized RNA-binding protein C660.15
gi|4049514|emb|CAA22535.1| mRNA cleavage factor complex subunit (predicted)
[Schizosaccharomyces pombe]
Length = 474
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 94/154 (61%), Gaps = 9/154 (5%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNH----V 169
+ L+++F ++GE+ + T+ D TGRSRGF F+ FK+ + V +V+++ +H +
Sbjct: 177 DSLRDYFEQFGEVLDCTVMRDSTTGRSRGFGFLTFKNPKC-----VNEVMSKEHHLDGKI 231
Query: 170 INNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFC 229
I+ K+ ++ + K+ K+FVGG+ + +EE + F QFG +++ + DK + + F
Sbjct: 232 IDPKRAIPREEQEKTAKMFVGGVPGDCTEEEFRNFFNQFGRVLDATLMMDKDTGRPRGFG 291
Query: 230 FITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
F+T+E+ES V + P I+ K V+VK+ATPK
Sbjct: 292 FVTYENESAVEATMSQPYITIHGKPVEVKRATPK 325
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 51/83 (61%), Gaps = 1/83 (1%)
Query: 183 KSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDL 242
+ GK+F+GGL+ E D+ ++ +F QFG +++ + D + + + F F+TF++ V ++
Sbjct: 161 EDGKMFIGGLNWETTDDSLRDYFEQFGEVLDCTVMRDSTTGRSRGFGFLTFKNPKCVNEV 220
Query: 243 LKNPKQKINDKEVDVKKATPKPE 265
+ + ++ K +D K+A P+ E
Sbjct: 221 MSK-EHHLDGKIIDPKRAIPREE 242
Score = 42.4 bits (98), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 27/37 (72%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKD 644
+ L+++F ++GE+ + T+ D TGRSRGF F+ FK+
Sbjct: 177 DSLRDYFEQFGEVLDCTVMRDSTTGRSRGFGFLTFKN 213
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 32/53 (60%)
Query: 445 IIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 497
+++ + DK + + F F+T+E+ES V + P I+ K V+VK+ATPK
Sbjct: 273 VLDATLMMDKDTGRPRGFGFVTYENESAVEATMSQPYITIHGKPVEVKRATPK 325
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 29/46 (63%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLE 649
D EE + F+++G + + TL D +TGR RGF F+ +++ ++E
Sbjct: 257 DCTEEEFRNFFNQFGRVLDATLMMDKDTGRPRGFGFVTYENESAVE 302
>gi|443725988|gb|ELU13330.1| hypothetical protein CAPTEDRAFT_219071 [Capitella teleta]
Length = 453
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 92/160 (57%), Gaps = 17/160 (10%)
Query: 116 LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNKKI 175
+ ++FS+YGE+ + + +P TG+SRGF F+ FKD + V+ V+A HV+++++I
Sbjct: 24 MLKYFSRYGEVIDCVVMKNPQTGKSRGFGFVTFKD-----PSCVKTVLANQPHVLDSRQI 78
Query: 176 EAKKAKAKS------------GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKS 223
+ K+ +S K+F+GGL + ++EIK HFA+FG + + + D+ K
Sbjct: 79 DPKQCNPRSMNKGGKSAENSKRKVFMGGLPSNITEDEIKEHFAEFGEVQDVVIMVDQDKE 138
Query: 224 QRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ + F F+TF+ E V ++ + K+V+ K+A P+
Sbjct: 139 RSRGFGFLTFDCEESVEKVISQHYVPVKGKQVECKRAQPR 178
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 52/84 (61%), Gaps = 6/84 (7%)
Query: 107 GIVHKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ ITE E+KEHF+++GE+++V + D + RSRGF F+ F ES+EK VI++
Sbjct: 106 GLPSNITEDEIKEHFAEFGEVQDVVIMVDQDKERSRGFGFLTFDCEESVEK-----VISQ 160
Query: 166 GNHVINNKKIEAKKAKAKSGKIFV 189
+ K++E K+A+ + K+
Sbjct: 161 HYVPVKGKQVECKRAQPREMKLMA 184
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 45/79 (56%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GKIFVGGLS + + +F+++G +I+ + + + + F F+TF+ S V +L
Sbjct: 8 GKIFVGGLSWDTTHATMLKYFSRYGEVIDCVVMKNPQTGKSRGFGFVTFKDPSCVKTVLA 67
Query: 245 NPKQKINDKEVDVKKATPK 263
N ++ +++D K+ P+
Sbjct: 68 NQPHVLDSRQIDPKQCNPR 86
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Query: 601 GIVDKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
G+ ITE E+KEHF+++GE+++V + D + RSRGF F+ F ES+EK
Sbjct: 106 GLPSNITEDEIKEHFAEFGEVQDVVIMVDQDKERSRGFGFLTFDCEESVEK 156
Score = 45.8 bits (107), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 29/46 (63%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLE 649
D + ++FS+YGE+ + + +P TG+SRGF F+ FKD ++
Sbjct: 18 DTTHATMLKYFSRYGEVIDCVVMKNPQTGKSRGFGFVTFKDPSCVK 63
>gi|302835614|ref|XP_002949368.1| hypothetical protein VOLCADRAFT_104291 [Volvox carteri f.
nagariensis]
gi|300265195|gb|EFJ49387.1| hypothetical protein VOLCADRAFT_104291 [Volvox carteri f.
nagariensis]
Length = 340
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 92/159 (57%), Gaps = 15/159 (9%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
E+LKE+F KYGE+ +V + D T R RGF FI F D + + A E +H I+ +
Sbjct: 75 EKLKEYFLKYGEVHDVVVMRDRQTRRPRGFGFITFTDPAAAQAACAE------SHTIDGR 128
Query: 174 KIEAKKA--------KAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQR 225
+I+AK + + +S KIFVGGL+P+ +D +K +F Q+G ++E + D + +
Sbjct: 129 QIDAKPSVPHGEGGQQPRSKKIFVGGLAPDTEDVHLKQYFEQYGTVVEALVMVDHNSGRS 188
Query: 226 KNFCFITFEHESVVIDLLKNPK-QKINDKEVDVKKATPK 263
+ F F+TF ES V + + ++ K+V+VK ATPK
Sbjct: 189 RGFGFVTFGEESSVEKVFAAGQMHELGGKQVEVKSATPK 227
Score = 46.6 bits (109), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 26/41 (63%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKD 644
D E+LKE+F KYGE+ +V + D T R RGF FI F D
Sbjct: 71 DTTEEKLKEYFLKYGEVHDVVVMRDRQTRRPRGFGFITFTD 111
Score = 43.5 bits (101), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 27/41 (65%)
Query: 610 LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
LK++F +YG + + D N+GRSRGF F+ F + S+EK
Sbjct: 164 LKQYFEQYGTVVEALVMVDHNSGRSRGFGFVTFGEESSVEK 204
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
K+F+GGLS + +E++K +F ++G + + + D+ + + F FITF +
Sbjct: 61 AKLFLGGLSWDTTEEKLKEYFLKYGEVHDVVVMRDRQTRRPRGFGFITFT-DPAAAQAAC 119
Query: 245 NPKQKINDKEVDVKKATPKPE 265
I+ +++D K + P E
Sbjct: 120 AESHTIDGRQIDAKPSVPHGE 140
>gi|116787897|gb|ABK24684.1| unknown [Picea sitchensis]
Length = 375
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 92/157 (58%), Gaps = 15/157 (9%)
Query: 116 LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNKKI 175
+HFSKYGE+ + + D +TG+ RGF F+ + D ASV D + E H+++ + +
Sbjct: 62 FTKHFSKYGELTDSVIMKDRHTGQPRGFGFVTYAD------ASVVDKVIEDKHILDGRTV 115
Query: 176 EAKKA--------KAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKN 227
E K+ K+ KIFVGG+ + ++E K +F++FG + E ++ D+S + +
Sbjct: 116 EIKRTIPRGNTSKGPKTKKIFVGGIPTTITEDEFKDYFSKFGKVAEHQIMQDRSTGRSRG 175
Query: 228 FCFITFEHESVVIDLLKNPKQ-KINDKEVDVKKATPK 263
F FITF+ E VV +++ K ++ K+V++KKA PK
Sbjct: 176 FGFITFDSEQVVEEIISQGKMIELGGKQVEIKKAEPK 212
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 55/87 (63%), Gaps = 7/87 (8%)
Query: 99 KNKMVSHPGIVHKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 157
K K + GI ITE E K++FSK+G++ + D +TGRSRGF FI F D+E +
Sbjct: 131 KTKKIFVGGIPTTITEDEFKDYFSKFGKVAEHQIMQDRSTGRSRGFGFITF-DSEQV--- 186
Query: 158 SVEDVIAEGNHV-INNKKIEAKKAKAK 183
VE++I++G + + K++E KKA+ K
Sbjct: 187 -VEEIISQGKMIELGGKQVEIKKAEPK 212
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Query: 172 NKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFI 231
+K + + + GKIF+GGLS HF+++G + ++ + D+ Q + F F+
Sbjct: 33 DKNNDTSREASSPGKIFIGGLSRSTTTVVFTKHFSKYGELTDSVIMKDRHTGQPRGFGFV 92
Query: 232 TFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
T+ SVV ++++ K ++ + V++K+ P+
Sbjct: 93 TYADASVVDKVIED-KHILDGRTVEIKRTIPR 123
Score = 45.4 bits (106), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 593 KNKMVSHPGIVDKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
K K + GI ITE E K++FSK+G++ + D +TGRSRGF FI F + +E+
Sbjct: 131 KTKKIFVGGIPTTITEDEFKDYFSKFGKVAEHQIMQDRSTGRSRGFGFITFDSEQVVEE 189
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 610 LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVED 655
+HFSKYGE+ + + D +TG+ RGF F+ + D ++K +ED
Sbjct: 62 FTKHFSKYGELTDSVIMKDRHTGQPRGFGFVTYADASVVDKV-IED 106
Score = 39.3 bits (90), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQ-KINDKEVDVKKATPK 497
++ E ++ D+S + + F FITF+ E VV +++ K ++ K+V++KKA PK
Sbjct: 158 KVAEHQIMQDRSTGRSRGFGFITFDSEQVVEEIISQGKMIELGGKQVEIKKAEPK 212
>gi|222423819|dbj|BAH19875.1| AT4G26650 [Arabidopsis thaliana]
Length = 452
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 89/178 (50%), Gaps = 34/178 (19%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
E L+E+F KYG++ + D TGR+RGF FIVF D E+ ++ H+I+ +
Sbjct: 26 ERLQEYFGKYGDLVEAVIMRDRTTGRARGFGFIVFADPSVAERVIMDK------HIIDGR 79
Query: 174 KIEAKKA----------------------------KAKSGKIFVGGLSPEMKDEEIKAHF 205
+EAKKA A++ KIFVGGL + + E K +F
Sbjct: 80 TVEAKKAVPRDDQQVLKRHASPMHLISPSHGGNGGGARTKKIFVGGLPSSITEAEFKNYF 139
Query: 206 AQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
QFG I + + YD + + + F FITF+ E V +L ++N K ++VK+A PK
Sbjct: 140 DQFGTIADVVVMYDHNTQRPRGFGFITFDSEESVDMVLHKTFHELNGKMIEVKRAVPK 197
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GK+F+GG+S + +E ++ +F ++G+++E + D++ + + F FI F SV ++
Sbjct: 12 GKLFIGGISWDTDEERLQEYFGKYGDLVEAVIMRDRTTGRARGFGFIVFADPSVAERVIM 71
Query: 245 NPKQKINDKEVDVKKATPKPE 265
+ K I+ + V+ KKA P+ +
Sbjct: 72 D-KHIIDGRTVEAKKAVPRDD 91
Score = 47.0 bits (110), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 28/47 (59%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D E L+E+F KYG++ + D TGR+RGF FIVF D E+
Sbjct: 22 DTDEERLQEYFGKYGDLVEAVIMRDRTTGRARGFGFIVFADPSVAER 68
>gi|326525423|dbj|BAJ88758.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 471
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 100/192 (52%), Gaps = 28/192 (14%)
Query: 96 MEAKNKMVSHPGIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESL 154
MEA + + GI + E+ L+++F ++GE+ + D NTGR+RGF FIVF +
Sbjct: 1 MEADSGKLFVGGISWETDEDRLRDYFGRFGEVTEAVIMRDRNTGRARGFGFIVFAEAGVA 60
Query: 155 EKASVEDVIAEGNHVINNKKIEAKKA---------------------KAKSGKIFVGGLS 193
E+ +++ H+I+ + +EAKKA ++ KIFVGGL+
Sbjct: 61 ERVTMDK------HMIDGRMVEAKKAVPRDDQSIASKNNGSSIGSPGPVRTRKIFVGGLA 114
Query: 194 PEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDK 253
+ + E + +F QFG I + + YD + + + F FIT++ E V L ++N K
Sbjct: 115 SNVTEVEFRRYFEQFGMITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALHKNFHELNGK 174
Query: 254 EVDVKKATPKPE 265
V+VK+A PK +
Sbjct: 175 MVEVKRAVPKEQ 186
Score = 46.6 bits (109), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 31/47 (65%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVE 654
+ L+++F ++GE+ + D NTGR+RGF FIVF + E+ +++
Sbjct: 20 DRLRDYFGRFGEVTEAVIMRDRNTGRARGFGFIVFAEAGVAERVTMD 66
Score = 42.7 bits (99), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 601 GIVDKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
G+ +TE E + +F ++G I +V + D NT R RGF FI + ++++KA
Sbjct: 112 GLASNVTEVEFRRYFEQFGMITDVVVMYDHNTQRPRGFGFITYDSEDAVDKA 163
>gi|449299976|gb|EMC95989.1| hypothetical protein BAUCODRAFT_511421 [Baudoinia compniacensis
UAMH 10762]
Length = 454
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 90/155 (58%), Gaps = 12/155 (7%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
E LK +FS++GE+ T+ D TGRSRGF F+ FKD + + V++ H ++ K
Sbjct: 13 ESLKNYFSQFGEVVECTVMRDGATGRSRGFGFLTFKDPKVVNTVMVKE------HTLDGK 66
Query: 174 KIEAKKA-----KAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNF 228
I+ K+A + ++ KIFVGG+S E ++ F +FGN+++ + DK + + F
Sbjct: 67 LIDPKRAIPRDEQERTAKIFVGGVSQEASQDDFANFFRRFGNVLDATLMMDKETGRPRGF 126
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
F+TF+ E+ V L++P I K ++VK+A P+
Sbjct: 127 GFVTFDSEAAVDRTLESPL-AICGKNIEVKRAQPR 160
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
Query: 187 IFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNP 246
+F+GGL+ E DE +K +F+QFG ++E + D + + + F F+TF+ VV ++
Sbjct: 1 MFIGGLNWETTDESLKNYFSQFGEVVECTVMRDGATGRSRGFGFLTFKDPKVVNTVMVK- 59
Query: 247 KQKINDKEVDVKKATPKPE 265
+ ++ K +D K+A P+ E
Sbjct: 60 EHTLDGKLIDPKRAIPRDE 78
Score = 47.8 bits (112), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 31/48 (64%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVED 655
E LK +FS++GE+ T+ D TGRSRGF F+ FKD + + V++
Sbjct: 13 ESLKNYFSQFGEVVECTVMRDGATGRSRGFGFLTFKDPKVVNTVMVKE 60
>gi|359488807|ref|XP_002272790.2| PREDICTED: nuclear pore membrane glycoprotein 210-like [Vitis
vinifera]
Length = 2363
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 104/210 (49%), Gaps = 17/210 (8%)
Query: 93 FYIMEAKNKMVSHPGIVHKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDT 151
+Y E + + + G+ + T + +HF KYGEI + + D TG+ RGF F+ + D
Sbjct: 2020 YYTREGRRRKIFIGGLARETTSAQFIKHFGKYGEITDSVIMKDRKTGQPRGFGFVTYADL 2079
Query: 152 ESLEKASVEDVIAEGNHVINNKKIEAKKAKAKSG---------KIFVGGLSPEMKDEEIK 202
SV D + + HVIN K++E K+ K KIFVGG+ + +EE K
Sbjct: 2080 ------SVVDQVIQDTHVINGKQVEIKRTIPKGAIGAKDFKTKKIFVGGIPATVTEEEFK 2133
Query: 203 AHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLL-KNPKQKINDKEVDVKKAT 261
F Q+G + + ++ D S S+ + F F+TF+ E V DLL + K ++ +V++KKA
Sbjct: 2134 DFFTQYGEVKDHQIMRDHSTSRSRGFGFVTFDTEQAVDDLLSQGNKLELAGAQVEIKKAE 2193
Query: 262 PKPEPFGVRGGRGGRGGRGGRGGRMAGGYG 291
PK V R R G GG Y
Sbjct: 2194 PKKPNPPVPPSRRYSDSRPGFGGGFGDAYA 2223
Score = 43.1 bits (100), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 35/55 (63%), Gaps = 2/55 (3%)
Query: 593 KNKMVSHPGIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTE 646
K K + GI +TEE K+ F++YGE+++ + D +T RSRGF F+ F DTE
Sbjct: 2114 KTKKIFVGGIPATVTEEEFKDFFTQYGEVKDHQIMRDHSTSRSRGFGFVTF-DTE 2167
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Query: 587 FYIVEAKNKMVSHPGIVDKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDT 645
+Y E + + + G+ + T + +HF KYGEI + + D TG+ RGF F+ + D
Sbjct: 2020 YYTREGRRRKIFIGGLARETTSAQFIKHFGKYGEITDSVIMKDRKTGQPRGFGFVTYADL 2079
Query: 646 ESLEKASVEDVY 657
+++ ++D +
Sbjct: 2080 SVVDQV-IQDTH 2090
>gi|302654951|ref|XP_003019271.1| hypothetical protein TRV_06675 [Trichophyton verrucosum HKI 0517]
gi|291182985|gb|EFE38626.1| hypothetical protein TRV_06675 [Trichophyton verrucosum HKI 0517]
Length = 496
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 91/156 (58%), Gaps = 7/156 (4%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVED------VIAEGN 167
+ LKE+FS++GE+ T+ D +GRSRGF F+ F D +++ V++ A+
Sbjct: 13 QSLKEYFSQFGEVHECTVMRDGASGRSRGFGFLTFTDPKTVNTVMVKEHYLDARSFADQL 72
Query: 168 HVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKN 227
+ I+ K+ + + ++ KIFVGG+S E ++E K F QFG +++ + DK + +
Sbjct: 73 YKIDPKRAIPRDEQERTSKIFVGGVSQEATEQEFKQFFMQFGRVVDATLMIDKDTGRPRG 132
Query: 228 FCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
F F+TF+ E+ V L P + I+ K ++VKKA P+
Sbjct: 133 FGFVTFDSEAAVEATLSVPLE-IHGKAIEVKKAQPR 167
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 33/51 (64%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYF 658
+ LKE+FS++GE+ T+ D +GRSRGF F+ F D +++ V++ Y
Sbjct: 13 QSLKEYFSQFGEVHECTVMRDGASGRSRGFGFLTFTDPKTVNTVMVKEHYL 63
Score = 42.7 bits (99), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 35/54 (64%), Gaps = 2/54 (3%)
Query: 601 GIVDKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASV 653
G+ + TE E K+ F ++G + + TL D +TGR RGF F+ F D+E+ +A++
Sbjct: 96 GVSQEATEQEFKQFFMQFGRVVDATLMIDKDTGRPRGFGFVTF-DSEAAVEATL 148
Score = 42.4 bits (98), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Query: 187 IFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNP 246
+F+GGL+ E D+ +K +F+QFG + E + D + + + F F+TF V ++
Sbjct: 1 MFIGGLNWETTDQSLKEYFSQFGEVHECTVMRDGASGRSRGFGFLTFTDPKTVNTVMVKE 60
Query: 247 ----KQKINDK--EVDVKKATPKPE 265
+ D+ ++D K+A P+ E
Sbjct: 61 HYLDARSFADQLYKIDPKRAIPRDE 85
>gi|224102217|ref|XP_002312594.1| predicted protein [Populus trichocarpa]
gi|222852414|gb|EEE89961.1| predicted protein [Populus trichocarpa]
Length = 195
Score = 100 bits (250), Expect = 2e-18, Method: Composition-based stats.
Identities = 54/167 (32%), Positives = 90/167 (53%), Gaps = 23/167 (13%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
E+L E+F++YG++ + D TGR RGF F+VF D SV D + + H I+ +
Sbjct: 20 EKLGEYFTQYGDVLQTVVMKDKTTGRPRGFGFVVFAD------PSVLDRVLQDTHTIDGR 73
Query: 174 KIEAKKAKAKSG-----------------KIFVGGLSPEMKDEEIKAHFAQFGNIIETEM 216
++ ++ A++G KIFVGGL P + D+ + +F FG + + +
Sbjct: 74 TVKEQQTNARAGNLNPARNTSSGGNIRTKKIFVGGLPPTLTDDGFRQYFEAFGLVTDVVI 133
Query: 217 PYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
YD+S + + F FI+F+ E V +L+ +N K+V+VK+A PK
Sbjct: 134 MYDQSTQRPRGFGFISFDSEDAVDRVLQRTFHDLNGKQVEVKRALPK 180
Score = 48.1 bits (113), Expect = 0.015, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 42/64 (65%)
Query: 182 AKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVID 241
+ GK+F+GG+S E +E++ +F Q+G++++T + DK+ + + F F+ F SV+
Sbjct: 3 SDQGKLFIGGISWETSEEKLGEYFTQYGDVLQTVVMKDKTTGRPRGFGFVVFADPSVLDR 62
Query: 242 LLKN 245
+L++
Sbjct: 63 VLQD 66
Score = 45.1 bits (105), Expect = 0.12, Method: Composition-based stats.
Identities = 18/43 (41%), Positives = 28/43 (65%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
E+L E+F++YG++ + D TGR RGF F+VF D L++
Sbjct: 20 EKLGEYFTQYGDVLQTVVMKDKTTGRPRGFGFVVFADPSVLDR 62
Score = 39.3 bits (90), Expect = 6.8, Method: Composition-based stats.
Identities = 18/46 (39%), Positives = 29/46 (63%)
Query: 452 YDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 497
YD+S + + F FI+F+ E V +L+ +N K+V+VK+A PK
Sbjct: 135 YDQSTQRPRGFGFISFDSEDAVDRVLQRTFHDLNGKQVEVKRALPK 180
>gi|414883901|tpg|DAA59915.1| TPA: hypothetical protein ZEAMMB73_814821 [Zea mays]
Length = 448
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 94/181 (51%), Gaps = 28/181 (15%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
GI + +E+ L+E+F ++GE+ + D +TGR+RGF F+VF D E+ +++
Sbjct: 13 GISWETSEDRLREYFGRFGEVTEAVIMRDRSTGRARGFGFVVFADAAVAERVTMDK---- 68
Query: 166 GNHVINNKKIEAKKA---------------------KAKSGKIFVGGLSPEMKDEEIKAH 204
H I+ + +EAKKA ++ KIFVGGL + + + + +
Sbjct: 69 --HTIDGRMVEAKKAVPRDDHSIVSKSNGSSTGSPGPGRTRKIFVGGLPSSVTEADFRRY 126
Query: 205 FAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKP 264
F QFG I + + YD + + + F FIT++ E V L ++N K V+VK+A PK
Sbjct: 127 FEQFGIITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALHKSFHELNGKMVEVKRAVPKE 186
Query: 265 E 265
+
Sbjct: 187 Q 187
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 182 AKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVID 241
A GK+FVGG+S E ++ ++ +F +FG + E + D+S + + F F+ F ++ V +
Sbjct: 4 ADYGKLFVGGISWETSEDRLREYFGRFGEVTEAVIMRDRSTGRARGFGFVVFA-DAAVAE 62
Query: 242 LLKNPKQKINDKEVDVKKATPK 263
+ K I+ + V+ KKA P+
Sbjct: 63 RVTMDKHTIDGRMVEAKKAVPR 84
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 31/47 (65%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVE 654
+ L+E+F ++GE+ + D +TGR+RGF F+VF D E+ +++
Sbjct: 21 DRLREYFGRFGEVTEAVIMRDRSTGRARGFGFVVFADAAVAERVTMD 67
Score = 40.0 bits (92), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 601 GIVDKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
G+ +TE + + +F ++G I +V + D NT R RGF FI + ++++KA
Sbjct: 113 GLPSSVTEADFRRYFEQFGIITDVVVMYDHNTQRPRGFGFITYDSEDAVDKA 164
Score = 38.9 bits (89), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 30/55 (54%)
Query: 445 IIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE 499
I + + YD + + + F FIT++ E V L ++N K V+VK+A PK +
Sbjct: 133 ITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALHKSFHELNGKMVEVKRAVPKEQ 187
>gi|224089693|ref|XP_002308799.1| predicted protein [Populus trichocarpa]
gi|222854775|gb|EEE92322.1| predicted protein [Populus trichocarpa]
Length = 476
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 89/171 (52%), Gaps = 27/171 (15%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+ LKE+F +GE+ + D TGR+RGF F+VF D E+ +E H+I+ +
Sbjct: 20 DRLKEYFRAFGEVLEAVIMKDRATGRARGFGFVVFADPAVAERVVMEK------HLIDGR 73
Query: 174 KIEAKKA---------------------KAKSGKIFVGGLSPEMKDEEIKAHFAQFGNII 212
+EAKKA A++ KIFVGGL+ + + + + +F QFG I
Sbjct: 74 NVEAKKAVPREDQNTLNKNSSSVNGSPGPARTKKIFVGGLASTVTESDFRKYFDQFGVIT 133
Query: 213 ETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ + YD + + + F FIT++ E V +L ++N K V+VK+A PK
Sbjct: 134 DVVVMYDHNTQRPRGFGFITYDSEEAVDRVLHKTFHELNGKMVEVKRAVPK 184
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GK+F+GG+S + ++ +K +F FG ++E + D++ + + F F+ F +V ++
Sbjct: 6 GKLFIGGISWDTNEDRLKEYFRAFGEVLEAVIMKDRATGRARGFGFVVFADPAVAERVVM 65
Query: 245 NPKQKINDKEVDVKKATPKPE 265
K I+ + V+ KKA P+ +
Sbjct: 66 E-KHLIDGRNVEAKKAVPRED 85
Score = 45.8 bits (107), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 29/51 (56%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVE 654
D + LKE+F +GE+ + D TGR+RGF F+VF D E+ +E
Sbjct: 16 DTNEDRLKEYFRAFGEVLEAVIMKDRATGRARGFGFVVFADPAVAERVVME 66
Score = 38.9 bits (89), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 30/53 (56%)
Query: 445 IIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 497
I + + YD + + + F FIT++ E V +L ++N K V+VK+A PK
Sbjct: 132 ITDVVVMYDHNTQRPRGFGFITYDSEEAVDRVLHKTFHELNGKMVEVKRAVPK 184
>gi|147783406|emb|CAN75218.1| hypothetical protein VITISV_003519 [Vitis vinifera]
Length = 482
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 88/171 (51%), Gaps = 27/171 (15%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+ LKE+F YGE+ + D TGR+RGF F+VF D E+ ++ H+I+ +
Sbjct: 20 DRLKEYFRTYGEVVEAVIMRDRTTGRARGFGFVVFADPAVAERVVMDK------HMIDGR 73
Query: 174 KIEAKKA---------------------KAKSGKIFVGGLSPEMKDEEIKAHFAQFGNII 212
+EAKKA ++ KIFVGGL+ + + + K +F QFG I
Sbjct: 74 TVEAKKAVPRDDQHLLNRNTGSIHGSPGPGRTKKIFVGGLASTVTESDFKKYFDQFGTIN 133
Query: 213 ETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ + YD + + + F FIT++ E V +L ++N K V+VK+A PK
Sbjct: 134 DVVVMYDHNTQRPRGFGFITYDSEEAVERVLHKTFHELNGKMVEVKRAVPK 184
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GK+F+GG+S + ++ +K +F +G ++E + D++ + + F F+ F +V ++
Sbjct: 6 GKLFIGGISWDTDEDRLKEYFRTYGEVVEAVIMRDRTTGRARGFGFVVFADPAVAERVVM 65
Query: 245 NPKQKINDKEVDVKKATPK 263
+ K I+ + V+ KKA P+
Sbjct: 66 D-KHMIDGRTVEAKKAVPR 83
Score = 46.2 bits (108), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 29/51 (56%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVE 654
D + LKE+F YGE+ + D TGR+RGF F+VF D E+ ++
Sbjct: 16 DTDEDRLKEYFRTYGEVVEAVIMRDRTTGRARGFGFVVFADPAVAERVVMD 66
>gi|357145619|ref|XP_003573706.1| PREDICTED: RNA-binding protein Musashi homolog 2-like [Brachypodium
distachyon]
Length = 347
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 88/159 (55%), Gaps = 17/159 (10%)
Query: 116 LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNKKI 175
KE+F KYGEI + + D T + RGF FI F D ++ D + E NHVI+ K++
Sbjct: 30 FKEYFGKYGEIIDAVIMKDRYTQKPRGFGFITFSD------PAIVDRVIEDNHVIDGKQV 83
Query: 176 EAKKA---------KAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRK 226
E K+ K+ KIFVGGL +KD+E K F++FG ++E E+ D S ++ +
Sbjct: 84 EIKRTIPKGAAPLKDFKTKKIFVGGLVSTLKDDEFKDFFSKFGKVVEHEIIRDHSTNKSR 143
Query: 227 NFCFITFEHESVVIDLLKNPKQKI--NDKEVDVKKATPK 263
F FI F+ E V +LL I + +V++KKA PK
Sbjct: 144 GFGFIVFDAEKTVDELLAKKGNMIDLDGTQVEIKKAEPK 182
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Query: 182 AKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVID 241
A KIF+GGLS E K +F ++G II+ + D+ + + F FITF ++V
Sbjct: 11 ASPAKIFIGGLSKETSLGTFKEYFGKYGEIIDAVIMKDRYTQKPRGFGFITFSDPAIVDR 70
Query: 242 LLKNPKQKINDKEVDVKKATPK 263
++++ I+ K+V++K+ PK
Sbjct: 71 VIED-NHVIDGKQVEIKRTIPK 91
Score = 43.1 bits (100), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 51/91 (56%), Gaps = 6/91 (6%)
Query: 95 IMEAKNKMVSHPGIVHKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTES 153
+ + K K + G+V + + E K+ FSK+G++ + D +T +SRGF FIVF
Sbjct: 96 LKDFKTKKIFVGGLVSTLKDDEFKDFFSKFGKVVEHEIIRDHSTNKSRGFGFIVF----D 151
Query: 154 LEKASVEDVIAEGNHV-INNKKIEAKKAKAK 183
EK E + +GN + ++ ++E KKA+ K
Sbjct: 152 AEKTVDELLAKKGNMIDLDGTQVEIKKAEPK 182
Score = 38.9 bits (89), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 610 LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVED 655
KE+F KYGEI + + D T + RGF FI F D +++ +ED
Sbjct: 30 FKEYFGKYGEIIDAVIMKDRYTQKPRGFGFITFSDPAIVDRV-IED 74
>gi|297796435|ref|XP_002866102.1| hypothetical protein ARALYDRAFT_495641 [Arabidopsis lyrata subsp.
lyrata]
gi|297311937|gb|EFH42361.1| hypothetical protein ARALYDRAFT_495641 [Arabidopsis lyrata subsp.
lyrata]
Length = 449
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 89/176 (50%), Gaps = 32/176 (18%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
E L+++FS YG++ + D TGR+RGF FIVF D E+ +E H+I+ +
Sbjct: 20 ERLRDYFSNYGDVVEAVIMRDRATGRARGFGFIVFADPCVSERVIMEK------HIIDGR 73
Query: 174 KIEAKKA--------------------------KAKSGKIFVGGLSPEMKDEEIKAHFAQ 207
+EAKKA ++ KIFVGGL + +EE K +F Q
Sbjct: 74 TVEAKKAVPRDDQQVLKRHASPIQLMSPVHGGGGGRTKKIFVGGLPSSITEEEFKNYFDQ 133
Query: 208 FGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
FG I + + YD + + + F FITF+ + V +L ++N K V+VK+A PK
Sbjct: 134 FGTIADVVVMYDHNTQRPRGFGFITFDSDDAVDRVLHKTFHELNGKLVEVKRAVPK 189
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GK+F+GG+S + +E ++ +F+ +G+++E + D++ + + F FI F + V + +
Sbjct: 6 GKLFIGGISWDTDEERLRDYFSNYGDVVEAVIMRDRATGRARGFGFIVFA-DPCVSERVI 64
Query: 245 NPKQKINDKEVDVKKATPK 263
K I+ + V+ KKA P+
Sbjct: 65 MEKHIIDGRTVEAKKAVPR 83
Score = 45.4 bits (106), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 30/51 (58%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVE 654
D E L+++FS YG++ + D TGR+RGF FIVF D E+ +E
Sbjct: 16 DTDEERLRDYFSNYGDVVEAVIMRDRATGRARGFGFIVFADPCVSERVIME 66
>gi|225460779|ref|XP_002274589.1| PREDICTED: uncharacterized protein LOC100267443 [Vitis vinifera]
Length = 478
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 88/171 (51%), Gaps = 27/171 (15%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+ LKE+F YGE+ + D TGR+RGF F+VF D E+ ++ H+I+ +
Sbjct: 20 DRLKEYFRTYGEVVEAVIMRDRTTGRARGFGFVVFADPAVAERVVMDK------HMIDGR 73
Query: 174 KIEAKKA---------------------KAKSGKIFVGGLSPEMKDEEIKAHFAQFGNII 212
+EAKKA ++ KIFVGGL+ + + + K +F QFG I
Sbjct: 74 TVEAKKAVPRDDQHLLNRNTGSIHGSPGPGRTKKIFVGGLASTVTESDFKKYFDQFGTIN 133
Query: 213 ETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ + YD + + + F FIT++ E V +L ++N K V+VK+A PK
Sbjct: 134 DVVVMYDHNTQRPRGFGFITYDSEEAVERVLHKTFHELNGKMVEVKRAVPK 184
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GK+F+GG+S + ++ +K +F +G ++E + D++ + + F F+ F +V ++
Sbjct: 6 GKLFIGGISWDTDEDRLKEYFRTYGEVVEAVIMRDRTTGRARGFGFVVFADPAVAERVVM 65
Query: 245 NPKQKINDKEVDVKKATPK 263
+ K I+ + V+ KKA P+
Sbjct: 66 D-KHMIDGRTVEAKKAVPR 83
Score = 46.2 bits (108), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 29/51 (56%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVE 654
D + LKE+F YGE+ + D TGR+RGF F+VF D E+ ++
Sbjct: 16 DTDEDRLKEYFRTYGEVVEAVIMRDRTTGRARGFGFVVFADPAVAERVVMD 66
>gi|157118269|ref|XP_001653144.1| heterogeneous nuclear ribonucleoprotein 27c [Aedes aegypti]
gi|94468876|gb|ABF18287.1| RNA-binding protein musashi/mRNA cleavage and polyadenylation
factor I complex subunit HRP1 [Aedes aegypti]
gi|108875770|gb|EAT39995.1| AAEL008257-PA [Aedes aegypti]
Length = 398
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 97/168 (57%), Gaps = 16/168 (9%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + T+E L+ +F +YGE+ + + + TGRSRGF F+ F D +++++A +
Sbjct: 24 GLSWETTQENLQRYFGRYGEVIDCVVMKNNETGRSRGFGFVTFADPDNVDRA-----LEN 78
Query: 166 GNHVINNKKIEAKKAKAKS----------GKIFVGGLSPEMKDEEIKAHFAQFGNIIETE 215
G H ++ + I+ K +S K+F+GGL P + + ++++ F+++GN++E
Sbjct: 79 GPHTLDGRTIDPKPCNPRSLHKPKRTGGYPKVFLGGLPPNITETDLRSFFSRYGNVMEVV 138
Query: 216 MPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ YD+ K + + F F++FE+E V I+ K+V++KKA P+
Sbjct: 139 IMYDQEKKKSRGFGFLSFENEPAVERATAEHFVNISGKQVEIKKAEPR 186
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 42/79 (53%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GK+FVGGLS E E ++ +F ++G +I+ + + + + F F+TF V L+
Sbjct: 18 GKLFVGGLSWETTQENLQRYFGRYGEVIDCVVMKNNETGRSRGFGFVTFADPDNVDRALE 77
Query: 245 NPKQKINDKEVDVKKATPK 263
N ++ + +D K P+
Sbjct: 78 NGPHTLDGRTIDPKPCNPR 96
Score = 45.4 bits (106), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 31/48 (64%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
+ E L+ +F +YGE+ + + + TGRSRGF F+ F D +++++A
Sbjct: 28 ETTQENLQRYFGRYGEVIDCVVMKNNETGRSRGFGFVTFADPDNVDRA 75
Score = 43.5 bits (101), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 601 GIVDKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVE 654
G+ ITE +L+ FS+YG + V + D +SRGF F+ F++ ++E+A+ E
Sbjct: 114 GLPPNITETDLRSFFSRYGNVMEVVIMYDQEKKKSRGFGFLSFENEPAVERATAE 168
>gi|302121706|gb|ADK92872.1| hnRNP [Hypericum perforatum]
Length = 477
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 97/191 (50%), Gaps = 29/191 (15%)
Query: 96 MEAKNKMVSHPGIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESL 154
M++ N + GI EE LKE+F +G++ + D TGR+RGF FIVF D
Sbjct: 1 MQSDNGKLFVGGISWDTNEERLKEYFGSFGDVVEAVIMKDRTTGRARGFGFIVFAD---- 56
Query: 155 EKASVEDVIAEGNHVINNKKIEAKKAKAK----------------------SGKIFVGGL 192
SV D + + H I+ + +EAK+A + + KIFVGGL
Sbjct: 57 --PSVADRVIKEKHNIDGRMVEAKRAIPRDDQNIPSRNSVSSMHGSPGPDHTRKIFVGGL 114
Query: 193 SPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKIND 252
+ + + + K +F QFG II+ + YD + + + F FIT++ + V +L ++N
Sbjct: 115 ASTVTESDFKNYFDQFGIIIDAVVMYDHNTQRPRGFGFITYDSDEAVDKVLTKTFHELNG 174
Query: 253 KEVDVKKATPK 263
K V+VK+A PK
Sbjct: 175 KMVEVKRAVPK 185
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 27/47 (57%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D E LKE+F +G++ + D TGR+RGF FIVF D ++
Sbjct: 16 DTNEERLKEYFGSFGDVVEAVIMKDRTTGRARGFGFIVFADPSVADR 62
Score = 40.0 bits (92), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 31/53 (58%)
Query: 445 IIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 497
II+ + YD + + + F FIT++ + V +L ++N K V+VK+A PK
Sbjct: 133 IIDAVVMYDHNTQRPRGFGFITYDSDEAVDKVLTKTFHELNGKMVEVKRAVPK 185
>gi|171451954|dbj|BAG15905.1| DAZAP [Dugesia japonica]
Length = 354
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 96/166 (57%), Gaps = 15/166 (9%)
Query: 107 GIVHKIT--EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIA 164
G +H+ T E LK +FSK+G++ ++ D TGRSRGF ++ + D E+++K +
Sbjct: 16 GGLHQSTTNESLKSYFSKFGDVVEASVMMDHRTGRSRGFGYVRYSDNEAVQK------VM 69
Query: 165 EGNHVINNKKIEAK------KAKAKSG-KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMP 217
H + K+I+ K K +++ KIFVGG++PE +E ++ F QFGNI E +
Sbjct: 70 STKHHLEGKEIDPKPCNVNMKGRSRRQLKIFVGGIAPEHNEETLRDFFKQFGNITELTLM 129
Query: 218 YDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
D+S + + F F+ F+ E+VV L+ + I +K+V++K P+
Sbjct: 130 KDQSGHRHRGFAFVAFDDEAVVKQLINDHILTIGNKQVEIKPMEPQ 175
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GK+FVGGL +E +K++F++FG+++E + D + + F ++ + V ++
Sbjct: 11 GKLFVGGLHQSTTNESLKSYFSKFGDVVEASVMMDHRTGRSRGFGYVRYSDNEAVQKVMS 70
Query: 245 NPKQKINDKEVDVKKATPKPEPFGVRG 271
K + KE+D PKP ++G
Sbjct: 71 T-KHHLEGKEID-----PKPCNVNMKG 91
Score = 45.8 bits (107), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 30/45 (66%)
Query: 606 ITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
E LK +FSK+G++ ++ D TGRSRGF ++ + D E+++K
Sbjct: 23 TNESLKSYFSKFGDVVEASVMMDHRTGRSRGFGYVRYSDNEAVQK 67
Score = 40.0 bits (92), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 33/56 (58%), Gaps = 2/56 (3%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVED 655
GI + EE L++ F ++G I +TL D + R RGFAF+ F D E++ K + D
Sbjct: 103 GIAPEHNEETLRDFFKQFGNITELTLMKDQSGHRHRGFAFVAFDD-EAVVKQLIND 157
>gi|297737532|emb|CBI26733.3| unnamed protein product [Vitis vinifera]
Length = 309
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 88/171 (51%), Gaps = 27/171 (15%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+ LKE+F YGE+ + D TGR+RGF F+VF D E+ ++ H+I+ +
Sbjct: 20 DRLKEYFRTYGEVVEAVIMRDRTTGRARGFGFVVFADPAVAERVVMD------KHMIDGR 73
Query: 174 KIEAKKA---------------------KAKSGKIFVGGLSPEMKDEEIKAHFAQFGNII 212
+EAKKA ++ KIFVGGL+ + + + K +F QFG I
Sbjct: 74 TVEAKKAVPRDDQHLLNRNTGSIHGSPGPGRTKKIFVGGLASTVTESDFKKYFDQFGTIN 133
Query: 213 ETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ + YD + + + F FIT++ E V +L ++N K V+VK+A PK
Sbjct: 134 DVVVMYDHNTQRPRGFGFITYDSEEAVERVLHKTFHELNGKMVEVKRAVPK 184
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GK+F+GG+S + ++ +K +F +G ++E + D++ + + F F+ F +V ++
Sbjct: 6 GKLFIGGISWDTDEDRLKEYFRTYGEVVEAVIMRDRTTGRARGFGFVVFADPAVAERVVM 65
Query: 245 NPKQKINDKEVDVKKATPK 263
+ K I+ + V+ KKA P+
Sbjct: 66 D-KHMIDGRTVEAKKAVPR 83
Score = 46.6 bits (109), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 29/51 (56%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVE 654
D + LKE+F YGE+ + D TGR+RGF F+VF D E+ ++
Sbjct: 16 DTDEDRLKEYFRTYGEVVEAVIMRDRTTGRARGFGFVVFADPAVAERVVMD 66
>gi|358342623|dbj|GAA50048.1| RNA-binding protein Musashi, partial [Clonorchis sinensis]
Length = 694
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 103/190 (54%), Gaps = 21/190 (11%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+ LK +FSK+GEIE + D TGRSRGF +I +K E SV+ V+A+ HV+++K
Sbjct: 445 DSLKSYFSKFGEIEESIVMMDNRTGRSRGFGYIKYK-----ESTSVDSVLAQKLHVVDHK 499
Query: 174 KIEAKKAKA-------KSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRK 226
+++ K+ +S KIFVGG+S E + I+ F+++G + + + +K + +
Sbjct: 500 EVDPKRCNINMKGKNRRSLKIFVGGISFEHDESTIRNFFSKYGRVTDVNLLTSPNKQRHR 559
Query: 227 NFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATP----KPEPFGVRGGR-----GGRG 277
F F+ F+ E VV +L++ ++ K+V+VK P +P GG+ GR
Sbjct: 560 GFAFVGFDDEEVVKNLIRMHFLNLDGKQVEVKAMEPPISQRPNYPISPGGQIHLQANGRA 619
Query: 278 GRGGRGGRMA 287
RGGR A
Sbjct: 620 VRGGRTNHFA 629
Score = 46.2 bits (108), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 33/50 (66%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVY 657
+ LK +FSK+GEIE + D TGRSRGF +I +K++ S++ + ++
Sbjct: 445 DSLKSYFSKFGEIEESIVMMDNRTGRSRGFGYIKYKESTSVDSVLAQKLH 494
Score = 42.7 bits (99), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 26/40 (65%)
Query: 610 LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLE 649
++ FSKYG + +V L + PN R RGFAF+ F D E ++
Sbjct: 534 IRNFFSKYGRVTDVNLLTSPNKQRHRGFAFVGFDDEEVVK 573
>gi|449444504|ref|XP_004140014.1| PREDICTED: uncharacterized protein LOC101222391 [Cucumis sativus]
gi|449505107|ref|XP_004162378.1| PREDICTED: uncharacterized protein LOC101227668 [Cucumis sativus]
Length = 476
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/171 (33%), Positives = 87/171 (50%), Gaps = 27/171 (15%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+ LKE+F+ YG++ + D TGR RGF FIVF D SV D + H I+ +
Sbjct: 20 DRLKEYFNAYGDVVEAVIMKDRTTGRGRGFGFIVFAD------PSVADRVIREKHNIDGR 73
Query: 174 KIEAKKA---------------------KAKSGKIFVGGLSPEMKDEEIKAHFAQFGNII 212
+EAK+A ++ KIFVGGL+ + + E K +F QFG I
Sbjct: 74 MVEAKRAVPRNDQNIVGRTSGSINVSPGPGRTRKIFVGGLASTVTESEFKNYFDQFGTIT 133
Query: 213 ETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ + YD + + + F FIT++ E V +L ++N K V+VK+A PK
Sbjct: 134 DVVVMYDHNTLRPRGFGFITYDSEEAVEKVLIKTFHELNGKMVEVKRAVPK 184
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 50/83 (60%), Gaps = 1/83 (1%)
Query: 181 KAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVI 240
+ SGK+FVGG+S + ++ +K +F +G+++E + D++ + + F FI F SV
Sbjct: 2 QTDSGKLFVGGISWDTDEDRLKEYFNAYGDVVEAVIMKDRTTGRGRGFGFIVFADPSVAD 61
Query: 241 DLLKNPKQKINDKEVDVKKATPK 263
+++ K I+ + V+ K+A P+
Sbjct: 62 RVIRE-KHNIDGRMVEAKRAVPR 83
Score = 44.7 bits (104), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 27/47 (57%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D + LKE+F+ YG++ + D TGR RGF FIVF D ++
Sbjct: 16 DTDEDRLKEYFNAYGDVVEAVIMKDRTTGRGRGFGFIVFADPSVADR 62
Score = 43.9 bits (102), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 601 GIVDKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVE 654
G+ +TE E K +F ++G I +V + D NT R RGF FI + E++EK ++
Sbjct: 112 GLASTVTESEFKNYFDQFGTITDVVVMYDHNTLRPRGFGFITYDSEEAVEKVLIK 166
>gi|18398061|ref|NP_566321.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|16930693|gb|AAL32012.1|AF436830_1 AT3g07810/F17A17_15 [Arabidopsis thaliana]
gi|23297627|gb|AAN12995.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|332641085|gb|AEE74606.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 494
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/192 (33%), Positives = 95/192 (49%), Gaps = 30/192 (15%)
Query: 96 MEAKNKMVSHPGIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESL 154
M++ N + GI EE LKE+FS +GE+ + D TGR+RGF F+VF D
Sbjct: 1 MQSDNGKLFIGGISWDTNEERLKEYFSSFGEVIEAVILKDRTTGRARGFGFVVFAD---- 56
Query: 155 EKASVEDVIAEGNHVINNKKIEAKKA-----------------------KAKSGKIFVGG 191
A E VI E H I+ + +EAKKA ++ KIFVGG
Sbjct: 57 -PAVAEIVITE-KHNIDGRLVEAKKAVPRDDQNMVNRSNSSSIQGSPGGPGRTRKIFVGG 114
Query: 192 LSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKIN 251
L + + + K +F QFG + + YD + + + F FIT++ E V +L ++N
Sbjct: 115 LPSSVTESDFKTYFEQFGTTTDVVVMYDHNTQRPRGFGFITYDSEEAVEKVLLKTFHELN 174
Query: 252 DKEVDVKKATPK 263
K V+VK+A PK
Sbjct: 175 GKMVEVKRAVPK 186
Score = 46.6 bits (109), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 27/46 (58%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLE 649
D E LKE+FS +GE+ + D TGR+RGF F+VF D E
Sbjct: 16 DTNEERLKEYFSSFGEVIEAVILKDRTTGRARGFGFVVFADPAVAE 61
Score = 40.0 bits (92), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 601 GIVDKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
G+ +TE + K +F ++G +V + D NT R RGF FI + E++EK
Sbjct: 114 GLPSSVTESDFKTYFEQFGTTTDVVVMYDHNTQRPRGFGFITYDSEEAVEK 164
>gi|296085054|emb|CBI28469.3| unnamed protein product [Vitis vinifera]
Length = 258
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 98/194 (50%), Gaps = 21/194 (10%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+ ++F KYGEI + + D TGR RGF FI + D SV D + + H+IN K
Sbjct: 32 DTFTKYFEKYGEITDSVVMKDRQTGRPRGFGFITYAD------PSVVDEVIQETHIINGK 85
Query: 174 KIEAKKA---------KAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQ 224
++E K+ K+ KIFVGG+ + ++E K F+++G ++E E+ +D +
Sbjct: 86 QVEIKRTIPRGSSQSNDFKTRKIFVGGILTSVSEDEFKNFFSKYGKVVEHEIIHDHVTKR 145
Query: 225 RKNFCFITFEHESVVIDLLKNPKQ-KINDKEVDVKKATPKPEPFGVRGGRGGRGGRGGRG 283
+ F FI F++E VV DLL N + +V++KKA PK GR G
Sbjct: 146 SRGFGFIVFDNEQVVDDLLTNGNMIDMEGTQVEIKKAEPKKS-----SSNPGRAPSFGGD 200
Query: 284 GRMAGGYGGYGGYG 297
RM G+ GYG
Sbjct: 201 SRMQMYNDGFSGYG 214
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 182 AKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVID 241
A GKIFVGGL+ E + +F ++G I ++ + D+ + + F FIT+ SVV +
Sbjct: 15 ASPGKIFVGGLAKETNLDTFTKYFEKYGEITDSVVMKDRQTGRPRGFGFITYADPSVVDE 74
Query: 242 LLKNPKQKINDKEVDVKKATPK 263
+++ IN K+V++K+ P+
Sbjct: 75 VIQE-THIINGKQVEIKRTIPR 95
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 50/87 (57%), Gaps = 7/87 (8%)
Query: 99 KNKMVSHPGIVHKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 157
K + + GI+ ++E E K FSKYG++ + D T RSRGF FIVF D E +
Sbjct: 104 KTRKIFVGGILTSVSEDEFKNFFSKYGKVVEHEIIHDHVTKRSRGFGFIVF-DNEQV--- 159
Query: 158 SVEDVIAEGNHV-INNKKIEAKKAKAK 183
V+D++ GN + + ++E KKA+ K
Sbjct: 160 -VDDLLTNGNMIDMEGTQVEIKKAEPK 185
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 43/89 (48%), Gaps = 6/89 (6%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQ-KINDKEVDVKKATPKPEPFG 502
+++E E+ +D + + F FI F++E VV DLL N + +V++KKA PK
Sbjct: 131 KVVEHEIIHDHVTKRSRGFGFIVFDNEQVVDDLLTNGNMIDMEGTQVEIKKAEPKKS--- 187
Query: 503 VRGGRGGRGGRGGRGGRMAGGYGGYGGYG 531
GR G RM G+ GYG
Sbjct: 188 --SSNPGRAPSFGGDSRMQMYNDGFSGYG 214
Score = 39.3 bits (90), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 593 KNKMVSHPGIVDKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLE 649
K + + GI+ ++E E K FSKYG++ + D T RSRGF FIVF + + ++
Sbjct: 104 KTRKIFVGGILTSVSEDEFKNFFSKYGKVVEHEIIHDHVTKRSRGFGFIVFDNEQVVD 161
>gi|15292697|gb|AAK92717.1| putative RNA-binding protein [Arabidopsis thaliana]
Length = 494
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/192 (33%), Positives = 95/192 (49%), Gaps = 30/192 (15%)
Query: 96 MEAKNKMVSHPGIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESL 154
M++ N + GI EE LKE+FS +GE+ + D TGR+RGF F+VF D
Sbjct: 1 MQSDNGKLFIGGISWDTNEERLKEYFSSFGEVIEAVILKDRTTGRARGFGFVVFAD---- 56
Query: 155 EKASVEDVIAEGNHVINNKKIEAKKA-----------------------KAKSGKIFVGG 191
A E VI E H I+ + +EAKKA ++ KIFVGG
Sbjct: 57 -PAVAEIVITE-KHNIDGRLVEAKKAVPRDDQNMVNRSNSSSIQGSPSGPGRTRKIFVGG 114
Query: 192 LSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKIN 251
L + + + K +F QFG + + YD + + + F FIT++ E V +L ++N
Sbjct: 115 LPSSVTESDFKTYFEQFGTTTDVVVMYDHNTQRPRGFGFITYDSEEAVEKVLLKTFHELN 174
Query: 252 DKEVDVKKATPK 263
K V+VK+A PK
Sbjct: 175 GKMVEVKRAVPK 186
Score = 46.6 bits (109), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 27/46 (58%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLE 649
D E LKE+FS +GE+ + D TGR+RGF F+VF D E
Sbjct: 16 DTNEERLKEYFSSFGEVIEAVILKDRTTGRARGFGFVVFADPAVAE 61
Score = 40.0 bits (92), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 601 GIVDKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
G+ +TE + K +F ++G +V + D NT R RGF FI + E++EK
Sbjct: 114 GLPSSVTESDFKTYFEQFGTTTDVVVMYDHNTQRPRGFGFITYDSEEAVEK 164
>gi|444314863|ref|XP_004178089.1| hypothetical protein TBLA_0A07810 [Tetrapisispora blattae CBS 6284]
gi|387511128|emb|CCH58570.1| hypothetical protein TBLA_0A07810 [Tetrapisispora blattae CBS 6284]
Length = 472
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 113/194 (58%), Gaps = 22/194 (11%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ TE+ L+++F+KYG + +V + +D + G+SRGF F+ F+++ S+ D + +
Sbjct: 156 GLNWDTTEDVLRQYFNKYGNVIDVKIMTDGHNGKSRGFGFLTFENSSSV------DEVVK 209
Query: 166 GNHVINNKKIEAKKA-----KAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDK 220
H+++ K I+ K+A + K+GKIFVGG+ P+++ +E + F+Q+G+II+ ++ DK
Sbjct: 210 TQHILDGKVIDPKRAIPREEQDKTGKIFVGGIGPDVRPKEFEEFFSQWGSIIDAQLMLDK 269
Query: 221 SKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGVRGGRGGRGGRG 280
+ + F F+T++ V + +N + K +++K+A RGG G RG
Sbjct: 270 DTGRSRGFGFVTYDSPDAVDKVCQNKFIEFKGKTIEIKRAE-------QRGGTGNNNERG 322
Query: 281 G-RGGRMAGGYGGY 293
G R RM +GG+
Sbjct: 323 GNRRNRMQ--HGGH 334
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 53/82 (64%), Gaps = 1/82 (1%)
Query: 184 SGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLL 243
S K+F+GGL+ + ++ ++ +F ++GN+I+ ++ D + + F F+TFE+ S V +++
Sbjct: 149 SCKMFIGGLNWDTTEDVLRQYFNKYGNVIDVKIMTDGHNGKSRGFGFLTFENSSSVDEVV 208
Query: 244 KNPKQKINDKEVDVKKATPKPE 265
K + ++ K +D K+A P+ E
Sbjct: 209 KT-QHILDGKVIDPKRAIPREE 229
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 34/47 (72%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D + L+++F+KYG + +V + +D + G+SRGF F+ F+++ S+++
Sbjct: 160 DTTEDVLRQYFNKYGNVIDVKIMTDGHNGKSRGFGFLTFENSSSVDE 206
Score = 40.4 bits (93), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 29/43 (67%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+E +E FS++G I + L D +TGRSRGF F+ + ++++K
Sbjct: 248 KEFEEFFSQWGSIIDAQLMLDKDTGRSRGFGFVTYDSPDAVDK 290
>gi|318086954|gb|ADV40069.1| putative heterogeneous nuclear ribonucleoprotein isoform A
[Latrodectus hesperus]
Length = 293
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 90/160 (56%), Gaps = 15/160 (9%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
E+L+E+FS+YGE+ + + + T RSRGF F+ FKD A V V++ G H ++ +
Sbjct: 30 EKLQEYFSRYGEVVDCVVMKNSETNRSRGFGFVTFKDV-----ACVAKVLSSGPHEVDGR 84
Query: 174 KIEAKKAKAKSG----------KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKS 223
I+ K ++ K+F+GGL P + ++++ F+++G ++E + YD+ K
Sbjct: 85 TIDPKVCSSRDSQQNKKAGQYPKVFLGGLPPNCTETDLRSFFSRYGTVVEVVLMYDQEKK 144
Query: 224 QRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ + F F++FE E V + KIN K+++ K A P+
Sbjct: 145 KSRGFGFLSFETEDSVKQVCAEHFVKINGKKIECKHAEPR 184
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 50/81 (61%)
Query: 183 KSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDL 242
++GKIFVGGLS E E+++ +F+++G +++ + + ++ + F F+TF+ + V +
Sbjct: 14 EAGKIFVGGLSWETTQEKLQEYFSRYGEVVDCVVMKNSETNRSRGFGFVTFKDVACVAKV 73
Query: 243 LKNPKQKINDKEVDVKKATPK 263
L + +++ + +D K + +
Sbjct: 74 LSSGPHEVDGRTIDPKVCSSR 94
Score = 47.8 bits (112), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 29/44 (65%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
E+L+E+FS+YGE+ + + + T RSRGF F+ FKD + K
Sbjct: 30 EKLQEYFSRYGEVVDCVVMKNSETNRSRGFGFVTFKDVACVAKV 73
>gi|9758187|dbj|BAB08572.1| RNA-binding protein-like [Arabidopsis thaliana]
Length = 473
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 88/175 (50%), Gaps = 31/175 (17%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
E L+++FS YG++ + D TGR+RGF FIVF D V + + H+I+ +
Sbjct: 20 ERLRDYFSNYGDVVEAVIMRDRATGRARGFGFIVFAD------PCVSERVIMDKHIIDGR 73
Query: 174 KIEAKKA-------------------------KAKSGKIFVGGLSPEMKDEEIKAHFAQF 208
+EAKKA ++ KIFVGGL + +EE K +F QF
Sbjct: 74 TVEAKKAVPRDDQQVLKRHASPIHLMSPVHGGGGRTKKIFVGGLPSSITEEEFKNYFDQF 133
Query: 209 GNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
G I + + YD + + + F FITF+ + V +L ++N K V+VK+A PK
Sbjct: 134 GTIADVVVMYDHNTQRPRGFGFITFDSDDAVDRVLHKTFHELNGKLVEVKRAVPK 188
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 49/83 (59%), Gaps = 9/83 (10%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFE----HESVVI 240
GK+F+GG+S + +E ++ +F+ +G+++E + D++ + + F FI F E V++
Sbjct: 6 GKLFIGGISWDTDEERLRDYFSNYGDVVEAVIMRDRATGRARGFGFIVFADPCVSERVIM 65
Query: 241 DLLKNPKQKINDKEVDVKKATPK 263
D K I+ + V+ KKA P+
Sbjct: 66 D-----KHIIDGRTVEAKKAVPR 83
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 26/41 (63%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKD 644
D E L+++FS YG++ + D TGR+RGF FIVF D
Sbjct: 16 DTDEERLRDYFSNYGDVVEAVIMRDRATGRARGFGFIVFAD 56
>gi|254566735|ref|XP_002490478.1| Subunit of cleavage factor I [Komagataella pastoris GS115]
gi|238030274|emb|CAY68197.1| Subunit of cleavage factor I [Komagataella pastoris GS115]
gi|328350869|emb|CCA37269.1| Nuclear polyadenylated RNA-binding protein 4 [Komagataella pastoris
CBS 7435]
Length = 462
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 100/163 (61%), Gaps = 12/163 (7%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + TEE L+ +F ++G+I ++T+ D TGRSRGF F+ F T ASV++V+ +
Sbjct: 159 GLNWETTEETLRNYFGQFGDITDLTIMRDNATGRSRGFGFLTFTKT-----ASVDEVLKK 213
Query: 166 GNHVINNKKIEAKKA-----KAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDK 220
HV++ K I+ K+A + K+GKIFVGG++ E+ +E+ +F+QFG II+ ++ DK
Sbjct: 214 -QHVLDGKLIDPKRAIPREEQDKTGKIFVGGIAAEVTEEDFTDYFSQFGTIIDAQLMIDK 272
Query: 221 SKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ + F F+T++ V + N + + +++K+A P+
Sbjct: 273 DTGRSRGFGFVTYDSPDAVDRVCANKYVPLKGRSMEIKRAEPR 315
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 57/92 (61%), Gaps = 3/92 (3%)
Query: 175 IEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFE 234
++A K++ GK+F+GGL+ E +E ++ +F QFG+I + + D + + + F F+TF
Sbjct: 143 VKADIYKSEQGKMFIGGLNWETTEETLRNYFGQFGDITDLTIMRDNATGRSRGFGFLTFT 202
Query: 235 HESVVIDLLKNPKQKIND-KEVDVKKATPKPE 265
+ V ++LK KQ + D K +D K+A P+ E
Sbjct: 203 KTASVDEVLK--KQHVLDGKLIDPKRAIPREE 232
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 6/79 (7%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
GI ++TEE ++FS++G I + L D +TGRSRGF F+ + +++++ V A
Sbjct: 243 GIAAEVTEEDFTDYFSQFGTIIDAQLMIDKDTGRSRGFGFVTYDSPDAVDR-----VCAN 297
Query: 166 GNHVINNKKIEAKKAKAKS 184
+ + +E K+A+ ++
Sbjct: 298 KYVPLKGRSMEIKRAEPRN 316
Score = 43.1 bits (100), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 30/43 (69%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
E L+ +F ++G+I ++T+ D TGRSRGF F+ F T S+++
Sbjct: 167 ETLRNYFGQFGDITDLTIMRDNATGRSRGFGFLTFTKTASVDE 209
Score = 43.1 bits (100), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
GI ++TEE ++FS++G I + L D +TGRSRGF F+ + +++++
Sbjct: 243 GIAAEVTEEDFTDYFSQFGTIIDAQLMIDKDTGRSRGFGFVTYDSPDAVDR 293
>gi|357447957|ref|XP_003594254.1| RNA-binding protein, putative [Medicago truncatula]
gi|355483302|gb|AES64505.1| RNA-binding protein, putative [Medicago truncatula]
Length = 522
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 80/260 (30%), Positives = 121/260 (46%), Gaps = 49/260 (18%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+ L+++F +G++ + D TGR+RGF F+VF D E+ +E HVI+ +
Sbjct: 59 DRLRQYFQNFGDVVEAVIMKDRTTGRARGFGFVVFADPSVAERVVMEK------HVIDGR 112
Query: 174 KIEAKKA-----------------------KAKSGKIFVGGLSPEMKDEEIKAHFAQFGN 210
+EAKKA ++ KIFVGGL+ + + + K +F QFG
Sbjct: 113 TVEAKKAVPRDDQNVFTRSNSSSHGSPAPTPIRTKKIFVGGLASTVTESDFKNYFDQFGT 172
Query: 211 IIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK---PEPF 267
I + + YD + + + F FIT++ E V +L ++N K V+VK+A PK P P
Sbjct: 173 ITDVVVMYDHNTQRPRGFGFITYDSEEAVEKVLHKTFHELNGKMVEVKRAVPKDLSPSP- 231
Query: 268 GVRGGRGGRG-GRGGRGGRMAGGYG-GY-----GGYGGGYGGILYKPLLFYELNELGISG 320
RG GG G R G + G+ GY GG+G G L +G SG
Sbjct: 232 -SRGQLGGFSYGTMSRVGSFSNGFAQGYNPSLIGGHGLRLDGRLSPA-------NVGRSG 283
Query: 321 RSLVCRT-GPMVQATPPLAE 339
SL + G + PPL +
Sbjct: 284 YSLFSPSYGTGLNFEPPLNQ 303
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GK+F+GG+S + ++ ++ +F FG+++E + D++ + + F F+ F SV ++
Sbjct: 45 GKLFIGGISWDTNEDRLRQYFQNFGDVVEAVIMKDRTTGRARGFGFVVFADPSVAERVVM 104
Query: 245 NPKQKINDKEVDVKKATPK 263
K I+ + V+ KKA P+
Sbjct: 105 E-KHVIDGRTVEAKKAVPR 122
Score = 43.5 bits (101), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Query: 601 GIVDKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
G+ +TE + K +F ++G I +V + D NT R RGF FI + E++EK
Sbjct: 153 GLASTVTESDFKNYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVEK 203
Score = 43.5 bits (101), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 29/51 (56%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVE 654
D + L+++F +G++ + D TGR+RGF F+VF D E+ +E
Sbjct: 55 DTNEDRLRQYFQNFGDVVEAVIMKDRTTGRARGFGFVVFADPSVAERVVME 105
Score = 39.7 bits (91), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 5/68 (7%)
Query: 445 IIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK---PEPF 501
I + + YD + + + F FIT++ E V +L ++N K V+VK+A PK P P
Sbjct: 173 ITDVVVMYDHNTQRPRGFGFITYDSEEAVEKVLHKTFHELNGKMVEVKRAVPKDLSPSP- 231
Query: 502 GVRGGRGG 509
RG GG
Sbjct: 232 -SRGQLGG 238
>gi|30696616|ref|NP_851195.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|334188426|ref|NP_001190546.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332009262|gb|AED96645.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332009265|gb|AED96648.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 448
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 89/175 (50%), Gaps = 31/175 (17%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
E L+++FS YG++ + D TGR+RGF FIVF D E+ ++ H+I+ +
Sbjct: 20 ERLRDYFSNYGDVVEAVIMRDRATGRARGFGFIVFADPCVSERVIMDK------HIIDGR 73
Query: 174 KIEAKKA-------------------------KAKSGKIFVGGLSPEMKDEEIKAHFAQF 208
+EAKKA ++ KIFVGGL + +EE K +F QF
Sbjct: 74 TVEAKKAVPRDDQQVLKRHASPIHLMSPVHGGGGRTKKIFVGGLPSSITEEEFKNYFDQF 133
Query: 209 GNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
G I + + YD + + + F FITF+ + V +L ++N K V+VK+A PK
Sbjct: 134 GTIADVVVMYDHNTQRPRGFGFITFDSDDAVDRVLHKTFHELNGKLVEVKRAVPK 188
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 49/83 (59%), Gaps = 9/83 (10%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFE----HESVVI 240
GK+F+GG+S + +E ++ +F+ +G+++E + D++ + + F FI F E V++
Sbjct: 6 GKLFIGGISWDTDEERLRDYFSNYGDVVEAVIMRDRATGRARGFGFIVFADPCVSERVIM 65
Query: 241 DLLKNPKQKINDKEVDVKKATPK 263
D K I+ + V+ KKA P+
Sbjct: 66 D-----KHIIDGRTVEAKKAVPR 83
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 26/41 (63%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKD 644
D E L+++FS YG++ + D TGR+RGF FIVF D
Sbjct: 16 DTDEERLRDYFSNYGDVVEAVIMRDRATGRARGFGFIVFAD 56
>gi|22531168|gb|AAM97088.1| RNA-binding protein-like [Arabidopsis thaliana]
Length = 448
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 89/175 (50%), Gaps = 31/175 (17%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
E L+++FS YG++ + D TGR+RGF FIVF D E+ ++ H+I+ +
Sbjct: 20 ERLRDYFSNYGDVVEAVIMRDRATGRARGFGFIVFADPCVSERVIMDK------HIIDGR 73
Query: 174 KIEAKKA-------------------------KAKSGKIFVGGLSPEMKDEEIKAHFAQF 208
+EAKKA ++ KIFVGGL + +EE K +F QF
Sbjct: 74 TVEAKKAVPRDDQQVLKRHASPIHLMSPVHGGGGRTKKIFVGGLPSSITEEEFKNYFDQF 133
Query: 209 GNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
G I + + YD + + + F FITF+ + V +L ++N K V+VK+A PK
Sbjct: 134 GTIADVVVMYDHNTQRPRGFGFITFDSDDAVDRVLHKTFHELNGKLVEVKRAVPK 188
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 49/83 (59%), Gaps = 9/83 (10%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFE----HESVVI 240
GK+F+GG+S + +E ++ +F+ +G+++E + D++ + + F FI F E V++
Sbjct: 6 GKLFIGGISWDTDEERLRDYFSNYGDVVEAVIMRDRATGRARGFGFIVFADPCVSERVIM 65
Query: 241 DLLKNPKQKINDKEVDVKKATPK 263
D K I+ + V+ KKA P+
Sbjct: 66 D-----KHIIDGRTVEAKKAVPR 83
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 26/41 (63%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKD 644
D E L+++FS YG++ + D TGR+RGF FIVF D
Sbjct: 16 DTDEERLRDYFSNYGDVVEAVIMRDRATGRARGFGFIVFAD 56
>gi|30680456|ref|NP_850539.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332641086|gb|AEE74607.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 495
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/192 (33%), Positives = 95/192 (49%), Gaps = 30/192 (15%)
Query: 96 MEAKNKMVSHPGIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESL 154
M++ N + GI EE LKE+FS +GE+ + D TGR+RGF F+VF D
Sbjct: 1 MQSDNGKLFIGGISWDTNEERLKEYFSSFGEVIEAVILKDRTTGRARGFGFVVFAD---- 56
Query: 155 EKASVEDVIAEGNHVINNKKIEAKKA-----------------------KAKSGKIFVGG 191
A E VI E H I+ + +EAKKA ++ KIFVGG
Sbjct: 57 -PAVAEIVITE-KHNIDGRLVEAKKAVPRDDQNMVNRSNSSSIQGSPGGPGRTRKIFVGG 114
Query: 192 LSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKIN 251
L + + + K +F QFG + + YD + + + F FIT++ E V +L ++N
Sbjct: 115 LPSSVTESDFKTYFEQFGTTTDVVVMYDHNTQRPRGFGFITYDSEEAVEKVLLKTFHELN 174
Query: 252 DKEVDVKKATPK 263
K V+VK+A PK
Sbjct: 175 GKMVEVKRAVPK 186
Score = 46.6 bits (109), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 27/46 (58%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLE 649
D E LKE+FS +GE+ + D TGR+RGF F+VF D E
Sbjct: 16 DTNEERLKEYFSSFGEVIEAVILKDRTTGRARGFGFVVFADPAVAE 61
Score = 40.0 bits (92), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 601 GIVDKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
G+ +TE + K +F ++G +V + D NT R RGF FI + E++EK
Sbjct: 114 GLPSSVTESDFKTYFEQFGTTTDVVVMYDHNTQRPRGFGFITYDSEEAVEK 164
>gi|393912245|gb|EJD76653.1| musashi [Loa loa]
Length = 336
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/160 (36%), Positives = 94/160 (58%), Gaps = 14/160 (8%)
Query: 113 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINN 172
E L+++F K+GE+ + DP T R+RGF FI F D ASV+ V+A+ H ++
Sbjct: 43 AEGLRDYFGKFGEVNECMVMRDPATKRARGFGFITFTD-----PASVDKVLAQELHELDG 97
Query: 173 KKIEAK-----KAKAK----SGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKS 223
KKI+ K KA++K + K+F+GGLS E++K +F Q+G + + + +DK+
Sbjct: 98 KKIDPKVAFPKKAQSKMIIKTKKVFIGGLSATSTLEDMKNYFEQYGKVEDAMLMFDKTTQ 157
Query: 224 QRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ + F FITF+++ V + + +IN K V+ KKA PK
Sbjct: 158 RHRGFGFITFDNDDVSDKVCEIHFHEINGKMVECKKAQPK 197
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 45/79 (56%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GK+F+GGLS + E ++ +F +FG + E + D + + + F FITF + V +L
Sbjct: 30 GKMFIGGLSWQTTAEGLRDYFGKFGEVNECMVMRDPATKRARGFGFITFTDPASVDKVLA 89
Query: 245 NPKQKINDKEVDVKKATPK 263
+++ K++D K A PK
Sbjct: 90 QELHELDGKKIDPKVAFPK 108
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 32/51 (62%)
Query: 607 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVY 657
E L+++F K+GE+ + DP T R+RGF FI F D S++K ++++
Sbjct: 43 AEGLRDYFGKFGEVNECMVMRDPATKRARGFGFITFTDPASVDKVLAQELH 93
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 33/52 (63%), Gaps = 2/52 (3%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFY 659
E++K +F +YG++E+ L D T R RGF FI F + + +K V +++F+
Sbjct: 133 EDMKNYFEQYGKVEDAMLMFDKTTQRHRGFGFITFDNDDVSDK--VCEIHFH 182
>gi|195574505|ref|XP_002105229.1| GD21374 [Drosophila simulans]
gi|194201156|gb|EDX14732.1| GD21374 [Drosophila simulans]
Length = 2951
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 91/164 (55%), Gaps = 7/164 (4%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKAS------V 159
G+ ++ T+E LK HF K+G I +V + DP T RSRGF FI + + +++A +
Sbjct: 2623 GLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFITYSHSSMIDEAQKSRPHKI 2682
Query: 160 EDVIAEGNHVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYD 219
+ + E + + I++ A A K+FVG L + ++ I+ +F FGNI++ + D
Sbjct: 2683 DGRVVEPKRAVPRQDIDSPNAGATVKKLFVGALKDDHDEQSIRDYFQNFGNIVDINIVID 2742
Query: 220 KSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
K +++ F F+ F+ V ++ + ++N K VDVKKA PK
Sbjct: 2743 KETGKKRGFAFVEFDDYDPVDKVVLQKQHQLNGKMVDVKKALPK 2786
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 49/80 (61%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+F+GGL DE +KAHF ++GNI++ + D + + F FIT+ H S++ + K+
Sbjct: 2618 KLFIGGLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFITYSHSSMIDEAQKS 2677
Query: 246 PKQKINDKEVDVKKATPKPE 265
KI+ + V+ K+A P+ +
Sbjct: 2678 RPHKIDGRVVEPKRAVPRQD 2697
Score = 46.6 bits (109), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 28/44 (63%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
E LK HF K+G I +V + DP T RSRGF FI + + +++A
Sbjct: 2631 ENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFITYSHSSMIDEA 2674
Score = 39.7 bits (91), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 30/47 (63%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVE 654
+ ++++F +G I ++ + D TG+ RGFAF+ F D + ++K ++
Sbjct: 2722 QSIRDYFQNFGNIVDINIVIDKETGKKRGFAFVEFDDYDPVDKVVLQ 2768
>gi|367007988|ref|XP_003688723.1| hypothetical protein TPHA_0P01310 [Tetrapisispora phaffii CBS 4417]
gi|357527033|emb|CCE66289.1| hypothetical protein TPHA_0P01310 [Tetrapisispora phaffii CBS 4417]
Length = 518
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 98/163 (60%), Gaps = 12/163 (7%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + TE+ L+++F+KYG + + + D NTGRSRGF F+ F E AS D + +
Sbjct: 170 GLNWETTEDTLRDYFNKYGSVVELKIMKDNNTGRSRGFGFLTF------ENASSVDEVVK 223
Query: 166 GNHVINNKKIEAKKA-----KAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDK 220
H+++ K I+ K+A + K+GKIFVGG+ +++ +E + FAQ+G II+ ++ DK
Sbjct: 224 TQHILDGKVIDPKRAIPREEQDKTGKIFVGGIGADVRPKEFEEFFAQYGTIIDAQLMLDK 283
Query: 221 SKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ + F F+T++ V + ++ + K++++K+A P+
Sbjct: 284 DTGRSRGFGFVTYDSPDAVDRVCQSKYIEFKGKQIEIKRAEPR 326
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 61/93 (65%), Gaps = 2/93 (2%)
Query: 173 KKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFIT 232
+K++A +K S K+F+GGL+ E ++ ++ +F ++G+++E ++ D + + + F F+T
Sbjct: 153 RKVKADLSK-DSCKMFIGGLNWETTEDTLRDYFNKYGSVVELKIMKDNNTGRSRGFGFLT 211
Query: 233 FEHESVVIDLLKNPKQKINDKEVDVKKATPKPE 265
FE+ S V +++K + ++ K +D K+A P+ E
Sbjct: 212 FENASSVDEVVKT-QHILDGKVIDPKRAIPREE 243
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 31/43 (72%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+ L+++F+KYG + + + D NTGRSRGF F+ F++ S+++
Sbjct: 178 DTLRDYFNKYGSVVELKIMKDNNTGRSRGFGFLTFENASSVDE 220
Score = 43.1 bits (100), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 42/77 (54%), Gaps = 5/77 (6%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+E +E F++YG I + L D +TGRSRGF F+ + +++++ I K
Sbjct: 262 KEFEEFFAQYGTIIDAQLMLDKDTGRSRGFGFVTYDSPDAVDRVCQSKYIE-----FKGK 316
Query: 174 KIEAKKAKAKSGKIFVG 190
+IE K+A+ ++ + G
Sbjct: 317 QIEIKRAEPRNNQKASG 333
Score = 40.4 bits (93), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 30/48 (62%)
Query: 603 VDKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D +E +E F++YG I + L D +TGRSRGF F+ + +++++
Sbjct: 257 ADVRPKEFEEFFAQYGTIIDAQLMLDKDTGRSRGFGFVTYDSPDAVDR 304
>gi|242093370|ref|XP_002437175.1| hypothetical protein SORBIDRAFT_10g022380 [Sorghum bicolor]
gi|241915398|gb|EER88542.1| hypothetical protein SORBIDRAFT_10g022380 [Sorghum bicolor]
Length = 414
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/187 (33%), Positives = 98/187 (52%), Gaps = 19/187 (10%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + TEE +HF KYG I + + D +T RGF F+ F D SV D + E
Sbjct: 105 GVAWETTEETFTKHFQKYGAITDSVIMKDKHTRMPRGFGFVTFSD------PSVLDRVLE 158
Query: 166 GNHVINNKKIEAK----------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETE 215
HVI+ + +E K K K+ KIFVGG+ + ++++K HF+ +G ++E +
Sbjct: 159 DAHVIDGRTVEVKRTVPKEEMSSKDGPKTKKIFVGGIPSSLTEDKLKEHFSSYGKVVEHQ 218
Query: 216 MPYDKSKSQRKNFCFITFEHESVVIDLLKNPK-QKINDKEVDVKKATPKPEPFGVRGGRG 274
+ D S + + F F+TFE E V ++ + + K+V++KKA PK +P G
Sbjct: 219 IMLDHSTGRSRGFGFVTFESEDAVERVMSEGRMHDLGGKQVEIKKAEPK-KPGGGDSSSN 277
Query: 275 GRGGRGG 281
GR RGG
Sbjct: 278 GRHSRGG 284
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 184 SGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLL 243
SGKIFVGG++ E +E HF ++G I ++ + DK + F F+TF SV+ +L
Sbjct: 98 SGKIFVGGVAWETTEETFTKHFQKYGAITDSVIMKDKHTRMPRGFGFVTFSDPSVLDRVL 157
Query: 244 KNPKQKINDKEVDVKKATPKPE 265
++ I+ + V+VK+ PK E
Sbjct: 158 EDA-HVIDGRTVEVKRTVPKEE 178
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 593 KNKMVSHPGIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
K K + GI +TE+ LKEHFS YG++ + D +TGRSRGF F+ F+ +++E+
Sbjct: 186 KTKKIFVGGIPSSLTEDKLKEHFSSYGKVVEHQIMLDHSTGRSRGFGFVTFESEDAVERV 245
Query: 652 SVE 654
E
Sbjct: 246 MSE 248
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPK-QKINDKEVDVKKATPKPEPFG 502
+++E ++ D S + + F F+TFE E V ++ + + K+V++KKA PK +P G
Sbjct: 213 KVVEHQIMLDHSTGRSRGFGFVTFESEDAVERVMSEGRMHDLGGKQVEIKKAEPK-KPGG 271
Query: 503 VRGGRGGRGGRGG 515
GR RGG
Sbjct: 272 GDSSSNGRHSRGG 284
Score = 38.9 bits (89), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVY 657
G+ + TEE +HF KYG I + + D +T RGF F+ F D L++ +ED +
Sbjct: 105 GVAWETTEETFTKHFQKYGAITDSVIMKDKHTRMPRGFGFVTFSDPSVLDRV-LEDAH 161
>gi|18423760|ref|NP_568826.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|42573682|ref|NP_974937.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|15292725|gb|AAK92731.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|20465895|gb|AAM20100.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|332009263|gb|AED96646.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332009264|gb|AED96647.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 460
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 88/175 (50%), Gaps = 31/175 (17%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
E L+++FS YG++ + D TGR+RGF FIVF D V + + H+I+ +
Sbjct: 20 ERLRDYFSNYGDVVEAVIMRDRATGRARGFGFIVFAD------PCVSERVIMDKHIIDGR 73
Query: 174 KIEAKKA-------------------------KAKSGKIFVGGLSPEMKDEEIKAHFAQF 208
+EAKKA ++ KIFVGGL + +EE K +F QF
Sbjct: 74 TVEAKKAVPRDDQQVLKRHASPIHLMSPVHGGGGRTKKIFVGGLPSSITEEEFKNYFDQF 133
Query: 209 GNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
G I + + YD + + + F FITF+ + V +L ++N K V+VK+A PK
Sbjct: 134 GTIADVVVMYDHNTQRPRGFGFITFDSDDAVDRVLHKTFHELNGKLVEVKRAVPK 188
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 50/85 (58%), Gaps = 9/85 (10%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFE----HESVVI 240
GK+F+GG+S + +E ++ +F+ +G+++E + D++ + + F FI F E V++
Sbjct: 6 GKLFIGGISWDTDEERLRDYFSNYGDVVEAVIMRDRATGRARGFGFIVFADPCVSERVIM 65
Query: 241 DLLKNPKQKINDKEVDVKKATPKPE 265
D K I+ + V+ KKA P+ +
Sbjct: 66 D-----KHIIDGRTVEAKKAVPRDD 85
Score = 44.7 bits (104), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 26/41 (63%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKD 644
D E L+++FS YG++ + D TGR+RGF FIVF D
Sbjct: 16 DTDEERLRDYFSNYGDVVEAVIMRDRATGRARGFGFIVFAD 56
>gi|6648193|gb|AAF21191.1|AC013483_15 putative RNA-binding protein [Arabidopsis thaliana]
Length = 492
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/192 (33%), Positives = 95/192 (49%), Gaps = 30/192 (15%)
Query: 96 MEAKNKMVSHPGIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESL 154
M++ N + GI EE LKE+FS +GE+ + D TGR+RGF F+VF D
Sbjct: 1 MQSDNGKLFIGGISWDTNEERLKEYFSSFGEVIEAVILKDRTTGRARGFGFVVFAD---- 56
Query: 155 EKASVEDVIAEGNHVINNKKIEAKKA-----------------------KAKSGKIFVGG 191
A E VI E H I+ + +EAKKA ++ KIFVGG
Sbjct: 57 -PAVAEIVITE-KHNIDGRLVEAKKAVPRDDQNMVNRSNSSSIQGSPGGPGRTRKIFVGG 114
Query: 192 LSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKIN 251
L + + + K +F QFG + + YD + + + F FIT++ E V +L ++N
Sbjct: 115 LPSSVTESDFKTYFEQFGTTTDVVVMYDHNTQRPRGFGFITYDSEEAVEKVLLKTFHELN 174
Query: 252 DKEVDVKKATPK 263
K V+VK+A PK
Sbjct: 175 GKMVEVKRAVPK 186
Score = 46.2 bits (108), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 27/46 (58%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLE 649
D E LKE+FS +GE+ + D TGR+RGF F+VF D E
Sbjct: 16 DTNEERLKEYFSSFGEVIEAVILKDRTTGRARGFGFVVFADPAVAE 61
Score = 40.0 bits (92), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 601 GIVDKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
G+ +TE + K +F ++G +V + D NT R RGF FI + E++EK
Sbjct: 114 GLPSSVTESDFKTYFEQFGTTTDVVVMYDHNTQRPRGFGFITYDSEEAVEK 164
>gi|326471297|gb|EGD95306.1| heterogeneous nuclear ribonucleoprotein HRP1 [Trichophyton
tonsurans CBS 112818]
Length = 478
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 86/150 (57%), Gaps = 14/150 (9%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+ LKE+FS++GE+ T+ D +GRSRGF F+ F D ++L K I+ K
Sbjct: 13 QSLKEYFSQFGEVHECTVMRDGASGRSRGFGFLTFTDPKTLYK-------------IDPK 59
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
+ + + ++ KIFVGG+S E ++E K F QFG +++ + DK + + F F+TF
Sbjct: 60 RAIPRDEQERTSKIFVGGVSQEATEQEFKQFFMQFGRVVDATLMIDKDTGRPRGFGFVTF 119
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ E+ V L P + I+ K ++VKKA P+
Sbjct: 120 DSEAAVEATLSVPLE-IHGKAIEVKKAQPR 148
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 30/43 (69%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+ LKE+FS++GE+ T+ D +GRSRGF F+ F D ++L K
Sbjct: 13 QSLKEYFSQFGEVHECTVMRDGASGRSRGFGFLTFTDPKTLYK 55
Score = 42.7 bits (99), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 35/54 (64%), Gaps = 2/54 (3%)
Query: 601 GIVDKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASV 653
G+ + TE E K+ F ++G + + TL D +TGR RGF F+ F D+E+ +A++
Sbjct: 77 GVSQEATEQEFKQFFMQFGRVVDATLMIDKDTGRPRGFGFVTF-DSEAAVEATL 129
Score = 42.7 bits (99), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 38/68 (55%), Gaps = 2/68 (2%)
Query: 187 IFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNP 246
+F+GGL+ E D+ +K +F+QFG + E + D + + + F F+TF + + +P
Sbjct: 1 MFIGGLNWETTDQSLKEYFSQFGEVHECTVMRDGASGRSRGFGFLTFTDPKTLYKI--DP 58
Query: 247 KQKINDKE 254
K+ I E
Sbjct: 59 KRAIPRDE 66
>gi|297829340|ref|XP_002882552.1| hypothetical protein ARALYDRAFT_478119 [Arabidopsis lyrata subsp.
lyrata]
gi|297328392|gb|EFH58811.1| hypothetical protein ARALYDRAFT_478119 [Arabidopsis lyrata subsp.
lyrata]
Length = 495
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/192 (33%), Positives = 95/192 (49%), Gaps = 30/192 (15%)
Query: 96 MEAKNKMVSHPGIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESL 154
M++ N + GI EE LKE+FS +GE+ + D TGR+RGF F+VF D
Sbjct: 1 MQSDNGKLFIGGISWDTNEERLKEYFSSFGEVIEAVILKDRTTGRARGFGFVVFAD---- 56
Query: 155 EKASVEDVIAEGNHVINNKKIEAKKA-----------------------KAKSGKIFVGG 191
A E VI E H I+ + +EAKKA ++ KIFVGG
Sbjct: 57 -PAVAEIVITE-KHNIDGRLVEAKKAVPRDDQNMVNRSNSSSIQGSPGGPGRTRKIFVGG 114
Query: 192 LSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKIN 251
L + + + K +F QFG + + YD + + + F FIT++ E V +L ++N
Sbjct: 115 LPSSVTESDFKTYFEQFGTTTDVVVMYDHNTQRPRGFGFITYDSEEAVEKVLLKTFHELN 174
Query: 252 DKEVDVKKATPK 263
K V+VK+A PK
Sbjct: 175 GKMVEVKRAVPK 186
Score = 46.2 bits (108), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 27/46 (58%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLE 649
D E LKE+FS +GE+ + D TGR+RGF F+VF D E
Sbjct: 16 DTNEERLKEYFSSFGEVIEAVILKDRTTGRARGFGFVVFADPAVAE 61
Score = 40.0 bits (92), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 601 GIVDKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
G+ +TE + K +F ++G +V + D NT R RGF FI + E++EK
Sbjct: 114 GLPSSVTESDFKTYFEQFGTTTDVVVMYDHNTQRPRGFGFITYDSEEAVEK 164
>gi|322798126|gb|EFZ19965.1| hypothetical protein SINV_80273 [Solenopsis invicta]
Length = 370
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/174 (36%), Positives = 93/174 (53%), Gaps = 28/174 (16%)
Query: 113 TEELKEHFSKYGEIENVTLKSDPNTG---------------RSRGFAFIVFKDTESLEKA 157
+E+L+E+FS +G + +V + DP T RSRGF FI F E
Sbjct: 53 SEKLREYFSMFGTVTDVLIMKDPMTQTVLVHRAGSRLVRLQRSRGFGFITFA-----EPG 107
Query: 158 SVEDVIAEGNHVINNKKIEAKKAKAK--------SGKIFVGGLSPEMKDEEIKAHFAQFG 209
SV+ V+ H ++ KKI+ K A K + KIFVGG+S + +E+KA+F QFG
Sbjct: 108 SVDKVLKCPIHTLDGKKIDPKHATPKNRAKQANRTKKIFVGGVSQDTSSDEVKAYFNQFG 167
Query: 210 NIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ ET M D+ + + F F+TFE+E VV + + I +K+V+ KKA PK
Sbjct: 168 KVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPK 221
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 15/94 (15%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKS--------------KSQR-KNFC 229
GK+FVGGLS + E+++ +F+ FG + + + D + QR + F
Sbjct: 40 GKLFVGGLSWQTSSEKLREYFSMFGTVTDVLIMKDPMTQTVLVHRAGSRLVRLQRSRGFG 99
Query: 230 FITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
FITF V +LK P ++ K++D K ATPK
Sbjct: 100 FITFAEPGSVDKVLKCPIHTLDGKKIDPKHATPK 133
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 38/57 (66%), Gaps = 2/57 (3%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFYS 660
D ++E+K +F+++G++E + D T R RGF F+ F++ + +++ V +++F++
Sbjct: 153 DTSSDEVKAYFNQFGKVEETVMLMDQQTKRHRGFGFVTFENEDVVDR--VCEIHFHT 207
>gi|302142161|emb|CBI19364.3| unnamed protein product [Vitis vinifera]
Length = 377
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 93/172 (54%), Gaps = 19/172 (11%)
Query: 107 GIVHKITEEL-KEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ ITE L +++FSKYG + ++ D GF F+ F D SL +A ++D +
Sbjct: 11 GVSGAITEGLLRDYFSKYGTVVETYIRRDSGRTPRGGFGFVTFADAASLSRA-LQD---Q 66
Query: 166 GNHVINNKKIEAKKAKAK--------------SGKIFVGGLSPEMKDEEIKAHFAQFGNI 211
H I +++E K+A K S KIFVGGLS + +EE K +F +FG I
Sbjct: 67 QQHFIQGQRVEVKRAMNKGQRNLDGSGNNNFTSKKIFVGGLSSNLTEEEFKNYFERFGRI 126
Query: 212 IETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ + +D + + + F FITFE E V +++N ++N K V+VK+A PK
Sbjct: 127 TDVVVMHDSATRRPRGFGFITFESEESVEHVMQNNFYELNGKRVEVKRAVPK 178
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 50/83 (60%), Gaps = 1/83 (1%)
Query: 182 AKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVID 241
A+ K+FVGG+S + + ++ +F+++G ++ET + D ++ R F F+TF + +
Sbjct: 2 AEQVKLFVGGVSGAITEGLLRDYFSKYGTVVETYIRRDSGRTPRGGFGFVTFADAASLSR 61
Query: 242 LLKNPKQK-INDKEVDVKKATPK 263
L++ +Q I + V+VK+A K
Sbjct: 62 ALQDQQQHFIQGQRVEVKRAMNK 84
Score = 44.7 bits (104), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVY 657
G+ +TEE K +F ++G I +V + D T R RGF FI F+ ES+E + Y
Sbjct: 106 GLSSNLTEEEFKNYFERFGRITDVVVMHDSATRRPRGFGFITFESEESVEHVMQNNFY 163
Score = 40.4 bits (93), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 32/54 (59%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 497
I + + +D + + + F FITFE E V +++N ++N K V+VK+A PK
Sbjct: 125 RITDVVVMHDSATRRPRGFGFITFESEESVEHVMQNNFYELNGKRVEVKRAVPK 178
>gi|226478812|emb|CAX72901.1| RNA-binding protein Musashi homolog 2 [Schistosoma japonicum]
Length = 345
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 90/162 (55%), Gaps = 16/162 (9%)
Query: 113 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINN 172
+E L+++F KYGE+ + DP T RSRGF F+ F D +EK V+ H+++
Sbjct: 91 SEVLRDYFQKYGELREYMIMRDPLTKRSRGFGFVTFSDPMCVEK-----VLEAAPHILDF 145
Query: 173 KKIEAK-----------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKS 221
KKI+ K K K+ ++F+GG++ + +EE+ +F+QFG + E+ DKS
Sbjct: 146 KKIDPKLAVPRKSGQNTKISTKTKRVFIGGVATQTTNEELSEYFSQFGKLESCELMMDKS 205
Query: 222 KSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
++ + F F+TFE E + + +++K V+ KKA PK
Sbjct: 206 TNRHRGFGFVTFESEESAEKVCEIHFHDLHNKMVEAKKAVPK 247
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 44/71 (61%), Gaps = 3/71 (4%)
Query: 590 VEAKNKMVSHPGIVDKIT-EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESL 648
+ K K V G+ + T EEL E+FS++G++E+ L D +T R RGF F+ F+ ES
Sbjct: 164 ISTKTKRVFIGGVATQTTNEELSEYFSQFGKLESCELMMDKSTNRHRGFGFVTFESEESA 223
Query: 649 EKASVEDVYFY 659
EK V +++F+
Sbjct: 224 EK--VCEIHFH 232
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GK+F+GGLSP E ++ +F ++G + E + D + + F F+TF V +L+
Sbjct: 78 GKMFIGGLSPTTTSEVLRDYFQKYGELREYMIMRDPLTKRSRGFGFVTFSDPMCVEKVLE 137
Query: 245 NPKQKINDKEVDVKKATPK 263
++ K++D K A P+
Sbjct: 138 AAPHILDFKKIDPKLAVPR 156
Score = 47.0 bits (110), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 28/45 (62%)
Query: 607 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
+E L+++F KYGE+ + DP T RSRGF F+ F D +EK
Sbjct: 91 SEVLRDYFQKYGELREYMIMRDPLTKRSRGFGFVTFSDPMCVEKV 135
>gi|444317072|ref|XP_004179193.1| hypothetical protein TBLA_0B08590 [Tetrapisispora blattae CBS 6284]
gi|387512233|emb|CCH59674.1| hypothetical protein TBLA_0B08590 [Tetrapisispora blattae CBS 6284]
Length = 623
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 101/163 (61%), Gaps = 12/163 (7%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + TE+ L+++F+KYG + ++ + D NTG+SRGF F+ F EK+S D + +
Sbjct: 176 GLNWETTEDGLRDYFNKYGNVVDLKIMKDNNTGKSRGFGFLTF------EKSSSVDEVVK 229
Query: 166 GNHVINNKKIEAKKA-----KAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDK 220
H+++ K I+ K+A + K+GKIF+GG+ +++ +E + FA++GNII+ ++ DK
Sbjct: 230 TQHILDGKVIDPKRAIPREEQDKTGKIFIGGIGADVRPKEFEEFFAKYGNIIDAQLMLDK 289
Query: 221 SKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ + F F+T++ V + ++ + K++++K+A P+
Sbjct: 290 DTGRSRGFGFVTYDSPDAVDRVCQHKFIEFKGKQIEIKRAQPR 332
Score = 52.4 bits (124), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 53/82 (64%), Gaps = 1/82 (1%)
Query: 184 SGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLL 243
S K+F+GGL+ E ++ ++ +F ++GN+++ ++ D + + + F F+TFE S V +++
Sbjct: 169 SCKMFIGGLNWETTEDGLRDYFNKYGNVVDLKIMKDNNTGKSRGFGFLTFEKSSSVDEVV 228
Query: 244 KNPKQKINDKEVDVKKATPKPE 265
K + ++ K +D K+A P+ E
Sbjct: 229 K-TQHILDGKVIDPKRAIPREE 249
Score = 43.5 bits (101), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 31/41 (75%)
Query: 610 LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
L+++F+KYG + ++ + D NTG+SRGF F+ F+ + S+++
Sbjct: 186 LRDYFNKYGNVVDLKIMKDNNTGKSRGFGFLTFEKSSSVDE 226
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 29/43 (67%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+E +E F+KYG I + L D +TGRSRGF F+ + +++++
Sbjct: 268 KEFEEFFAKYGNIIDAQLMLDKDTGRSRGFGFVTYDSPDAVDR 310
>gi|154296333|ref|XP_001548598.1| hypothetical protein BC1G_12993 [Botryotinia fuckeliana B05.10]
Length = 627
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 105/204 (51%), Gaps = 37/204 (18%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVED------------ 161
E LK++FS++GE+ T+ D +GRSRGF F+ FKD ++ V++
Sbjct: 133 ESLKDYFSQFGEVLECTVMRDGASGRSRGFGFLTFKDARTVNIVMVKEHYLDGKIVRPDL 192
Query: 162 ----------------VIAEGNHVINNKKIEAKKA-----KAKSGKIFVGGLSPEMKDEE 200
+ +EG H KI+ K+A + ++ KIFVGG+S + +++
Sbjct: 193 KTFNNSLRSYPSKFLLLASEGTHSHTTFKIDPKRAIPRDEQERTSKIFVGGVSQDASEQD 252
Query: 201 IKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKA 260
K +F QFG +++ + DK + + F F+TF+ E+ V L+ P + I+ K ++VKKA
Sbjct: 253 FKEYFTQFGRVVDATLMMDKDTGRPRGFGFVTFDSEAAVEACLEAPLE-IHGKPIEVKKA 311
Query: 261 TPK---PEPFGVRGGRGGRGGRGG 281
P+ E RG RG R +GG
Sbjct: 312 QPRGNIREEEETRGPRGSRFKKGG 335
Score = 47.8 bits (112), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 33/51 (64%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYF 658
E LK++FS++GE+ T+ D +GRSRGF F+ FKD ++ V++ Y
Sbjct: 133 ESLKDYFSQFGEVLECTVMRDGASGRSRGFGFLTFKDARTVNIVMVKEHYL 183
Score = 47.0 bits (110), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 35/56 (62%)
Query: 184 SGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVV 239
S K+F+GGL+ E DE +K +F+QFG ++E + D + + + F F+TF+ V
Sbjct: 118 SDKMFIGGLNWETTDESLKDYFSQFGEVLECTVMRDGASGRSRGFGFLTFKDARTV 173
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVE 654
D ++ KE+F+++G + + TL D +TGR RGF F+ F D+E+ +A +E
Sbjct: 247 DASEQDFKEYFTQFGRVVDATLMMDKDTGRPRGFGFVTF-DSEAAVEACLE 296
Score = 40.0 bits (92), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 4/74 (5%)
Query: 445 IIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK---PEPF 501
+++ + DK + + F F+TF+ E+ V L+ P + I+ K ++VKKA P+ E
Sbjct: 263 VVDATLMMDKDTGRPRGFGFVTFDSEAAVEACLEAPLE-IHGKPIEVKKAQPRGNIREEE 321
Query: 502 GVRGGRGGRGGRGG 515
RG RG R +GG
Sbjct: 322 ETRGPRGSRFKKGG 335
>gi|332840634|ref|XP_003314028.1| PREDICTED: RNA-binding protein Musashi homolog 1, partial [Pan
troglodytes]
Length = 324
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 87/150 (58%), Gaps = 14/150 (9%)
Query: 123 YGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNKKIEAK---- 178
+GE++ + DP T RSRGF F+ F D +A V+ V+A+ H +++K I+ K
Sbjct: 5 FGEVKECLVMRDPLTKRSRGFGFVTFMD-----QAGVDKVLAQSRHELDSKTIDPKVAFP 59
Query: 179 -----KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
K ++ KIFVGGLS E++K +F QFG + + + +DK+ ++ + F F+TF
Sbjct: 60 RRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTF 119
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKATPK 263
E E +V + + +IN+K V+ KKA PK
Sbjct: 120 ESEDIVEKVCEIHFHEINNKMVECKKAQPK 149
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 44/75 (58%), Gaps = 5/75 (6%)
Query: 109 VHKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNH 168
V+ E++K++F ++G++++ L D T R RGF F+ F+ + +EK V H
Sbjct: 80 VNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEK-----VCEIHFH 134
Query: 169 VINNKKIEAKKAKAK 183
INNK +E KKA+ K
Sbjct: 135 EINNKMVECKKAQPK 149
Score = 43.1 bits (100), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 37/57 (64%), Gaps = 2/57 (3%)
Query: 603 VDKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFY 659
V+ E++K++F ++G++++ L D T R RGF F+ F+ + +EK V +++F+
Sbjct: 80 VNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEK--VCEIHFH 134
Score = 39.7 bits (91), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 30/46 (65%)
Query: 452 YDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 497
+DK+ ++ + F F+TFE E +V + + +IN+K V+ KKA PK
Sbjct: 104 FDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPK 149
>gi|297850158|ref|XP_002892960.1| hypothetical protein ARALYDRAFT_335030 [Arabidopsis lyrata subsp.
lyrata]
gi|297338802|gb|EFH69219.1| hypothetical protein ARALYDRAFT_335030 [Arabidopsis lyrata subsp.
lyrata]
Length = 354
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/170 (34%), Positives = 95/170 (55%), Gaps = 26/170 (15%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + TEE +F K+GE+ + + +D TG RGF F+ F D+ EK + E
Sbjct: 65 GVSWETTEETFANYFGKFGEVVDSVIMTDRITGNPRGFGFVTFADSAVAEK------VLE 118
Query: 166 GNHVINNKKIEAK------------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIE 213
HVI+++K++ K KA +K+ KIFVGGL P ++++E+K +F +G+IIE
Sbjct: 119 EEHVIDDRKVDLKRTVPRGDRDTDIKAVSKTRKIFVGGLPPLLEEDELKNYFCVYGDIIE 178
Query: 214 TEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
++ YD + + F F+TF+ E V L +D +VD+K+A PK
Sbjct: 179 HQIMYDHHTGRSRGFGFVTFQTEDSVDRLF-------SDAKVDIKRAEPK 221
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GK+FVGG+S E +E +F +FG ++++ + D+ + F F+TF +V +L+
Sbjct: 59 GKLFVGGVSWETTEETFANYFGKFGEVVDSVIMTDRITGNPRGFGFVTFADSAVAEKVLE 118
Query: 245 NPKQKINDKEVDVKKATPK 263
+ I+D++VD+K+ P+
Sbjct: 119 E-EHVIDDRKVDLKRTVPR 136
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 29/43 (67%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+ELK +F YG+I + D +TGRSRGF F+ F+ +S+++
Sbjct: 164 DELKNYFCVYGDIIEHQIMYDHHTGRSRGFGFVTFQTEDSVDR 206
>gi|242043256|ref|XP_002459499.1| hypothetical protein SORBIDRAFT_02g005620 [Sorghum bicolor]
gi|241922876|gb|EER96020.1| hypothetical protein SORBIDRAFT_02g005620 [Sorghum bicolor]
Length = 455
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 94/179 (52%), Gaps = 28/179 (15%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
GI + +E+ L+++F ++GE+ + D +TGR+RGF F+VF D E+ +++
Sbjct: 19 GISWETSEDRLRDYFGRFGEVTEAVIMRDRSTGRARGFGFVVFADPAVAERVTMD----- 73
Query: 166 GNHVINNKKIEAKKA---------------------KAKSGKIFVGGLSPEMKDEEIKAH 204
H+I+ + +EAKKA ++ KIFVGGL + + + + +
Sbjct: 74 -KHMIDGRMVEAKKAVPRDDHSIVSKSNASSIGSPGPGRTRKIFVGGLPSNVTEADFRRY 132
Query: 205 FAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
F QFG I + + YD + + + F FIT++ E V L ++N K V+VK+A PK
Sbjct: 133 FEQFGVITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALHKSFHELNGKMVEVKRAVPK 191
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GK+FVGG+S E ++ ++ +F +FG + E + D+S + + F F+ F + V + +
Sbjct: 13 GKLFVGGISWETSEDRLRDYFGRFGEVTEAVIMRDRSTGRARGFGFVVFA-DPAVAERVT 71
Query: 245 NPKQKINDKEVDVKKATPK 263
K I+ + V+ KKA P+
Sbjct: 72 MDKHMIDGRMVEAKKAVPR 90
Score = 46.2 bits (108), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 31/47 (65%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVE 654
+ L+++F ++GE+ + D +TGR+RGF F+VF D E+ +++
Sbjct: 27 DRLRDYFGRFGEVTEAVIMRDRSTGRARGFGFVVFADPAVAERVTMD 73
Score = 40.4 bits (93), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 601 GIVDKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
G+ +TE + + +F ++G I +V + D NT R RGF FI + ++++KA
Sbjct: 119 GLPSNVTEADFRRYFEQFGVITDVVVMYDHNTQRPRGFGFITYDSEDAVDKA 170
Score = 38.9 bits (89), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 29/53 (54%)
Query: 445 IIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 497
I + + YD + + + F FIT++ E V L ++N K V+VK+A PK
Sbjct: 139 ITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALHKSFHELNGKMVEVKRAVPK 191
>gi|242047760|ref|XP_002461626.1| hypothetical protein SORBIDRAFT_02g005670 [Sorghum bicolor]
gi|241925003|gb|EER98147.1| hypothetical protein SORBIDRAFT_02g005670 [Sorghum bicolor]
Length = 453
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 94/179 (52%), Gaps = 28/179 (15%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
GI + +E+ L+++F ++GE+ + D +TGR+RGF F+VF D E+ +++
Sbjct: 17 GISWETSEDRLRDYFGRFGEVTEAVIMRDRSTGRARGFGFVVFADPAVAERVTMDK---- 72
Query: 166 GNHVINNKKIEAKKA---------------------KAKSGKIFVGGLSPEMKDEEIKAH 204
H+I+ + +EAKKA ++ KIFVGGL + + + + +
Sbjct: 73 --HMIDGRMVEAKKAVPRDDHSIVSKSNASSIGSPGPGRTRKIFVGGLPSNVTEADFRRY 130
Query: 205 FAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
F QFG I + + YD + + + F FIT++ E V L ++N K V+VK+A PK
Sbjct: 131 FEQFGVITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALHKSFHELNGKMVEVKRAVPK 189
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 51/89 (57%), Gaps = 1/89 (1%)
Query: 175 IEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFE 234
+EA A A GK+FVGG+S E ++ ++ +F +FG + E + D+S + + F F+ F
Sbjct: 1 MEAAAAVADYGKLFVGGISWETSEDRLRDYFGRFGEVTEAVIMRDRSTGRARGFGFVVFA 60
Query: 235 HESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ V + + K I+ + V+ KKA P+
Sbjct: 61 -DPAVAERVTMDKHMIDGRMVEAKKAVPR 88
Score = 46.2 bits (108), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 31/47 (65%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVE 654
+ L+++F ++GE+ + D +TGR+RGF F+VF D E+ +++
Sbjct: 25 DRLRDYFGRFGEVTEAVIMRDRSTGRARGFGFVVFADPAVAERVTMD 71
Score = 40.4 bits (93), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 601 GIVDKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
G+ +TE + + +F ++G I +V + D NT R RGF FI + ++++KA
Sbjct: 117 GLPSNVTEADFRRYFEQFGVITDVVVMYDHNTQRPRGFGFITYDSEDAVDKA 168
Score = 38.9 bits (89), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 29/53 (54%)
Query: 445 IIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 497
I + + YD + + + F FIT++ E V L ++N K V+VK+A PK
Sbjct: 137 ITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALHKSFHELNGKMVEVKRAVPK 189
>gi|449458854|ref|XP_004147161.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like [Cucumis
sativus]
Length = 462
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/194 (32%), Positives = 99/194 (51%), Gaps = 34/194 (17%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
GI + +E+ LK++FS YGE+ + + D T R RGF F+VF D SV D + +
Sbjct: 12 GISWETSEDKLKDYFSNYGEVMHTVVMRDKITSRPRGFGFVVFSD------PSVLDRVLQ 65
Query: 166 GNHVINNKKIEAKKAKAK--------------------------SGKIFVGGLSPEMKDE 199
H I+ K +EAK+A ++ + KIFVGGL P + +E
Sbjct: 66 DKHTIDGKTVEAKRALSREEQQTPARASNSNGRNSGGSGGGNMRTKKIFVGGLPPTLTEE 125
Query: 200 EIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKK 259
K +F +G++ + + YD++ + + F FI+F+ E V +L +N K+V+VK+
Sbjct: 126 GFKEYFEAYGHVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNGKQVEVKR 185
Query: 260 ATPKPEPFGVRGGR 273
A PK G GGR
Sbjct: 186 ALPKDANPGA-GGR 198
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GK+F+GG+S E ++++K +F+ +G ++ T + DK S+ + F F+ F SV+ +L+
Sbjct: 6 GKLFIGGISWETSEDKLKDYFSNYGEVMHTVVMRDKITSRPRGFGFVVFSDPSVLDRVLQ 65
Query: 245 NPKQKINDKEVDVKKATPKPE 265
+ K I+ K V+ K+A + E
Sbjct: 66 D-KHTIDGKTVEAKRALSREE 85
Score = 43.9 bits (102), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
G+ +TEE KE+F YG + +V + D NT R RGF FI F E++++
Sbjct: 117 GLPPTLTEEGFKEYFEAYGHVTDVVVMYDQNTRRPRGFGFISFDTEEAVDR 167
Score = 43.5 bits (101), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 28/43 (65%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
++LK++FS YGE+ + + D T R RGF F+VF D L++
Sbjct: 20 DKLKDYFSNYGEVMHTVVMRDKITSRPRGFGFVVFSDPSVLDR 62
Score = 39.7 bits (91), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 445 IIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGVR 504
+ + + YD++ + + F FI+F+ E V +L +N K+V+VK+A PK G
Sbjct: 137 VTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNGKQVEVKRALPKDANPGA- 195
Query: 505 GGR 507
GGR
Sbjct: 196 GGR 198
>gi|146197795|dbj|BAF57615.1| DAZ-associated protein [Dugesia japonica]
Length = 296
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 93/166 (56%), Gaps = 15/166 (9%)
Query: 107 GIVHKIT--EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIA 164
G +H+ T E LK +FSK+G++ ++ D TGRSRGF ++ + D E+++K +
Sbjct: 20 GGLHQSTTNESLKSYFSKFGDVVEASVMMDHRTGRSRGFGYVRYSDNEAVQK------VM 73
Query: 165 EGNHVINNKKIEAKKAKA-------KSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMP 217
H + K+I+ K + KIFVGG++PE +E ++ F QFGNI E +
Sbjct: 74 STKHHLEGKEIDPKPCNVNMKGRSRRQLKIFVGGIAPEHNEETLRDFFKQFGNITELTLM 133
Query: 218 YDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
D+S + + F F+ F+ E+VV L+ + I +K+V++K P+
Sbjct: 134 KDQSGHRHRGFAFVAFDDEAVVKQLINDHILTIGNKQVEIKPMEPQ 179
Score = 47.4 bits (111), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GK+FVGGL +E +K++F++FG+++E + D + + F ++ + V ++
Sbjct: 15 GKLFVGGLHQSTTNESLKSYFSKFGDVVEASVMMDHRTGRSRGFGYVRYSDNEAVQKVMS 74
Query: 245 NPKQKINDKEVDVKKATPKPEPFGVRG 271
K + KE+D PKP ++G
Sbjct: 75 T-KHHLEGKEID-----PKPCNVNMKG 95
Score = 45.4 bits (106), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 30/44 (68%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
E LK +FSK+G++ ++ D TGRSRGF ++ + D E+++K
Sbjct: 29 ESLKSYFSKFGDVVEASVMMDHRTGRSRGFGYVRYSDNEAVQKV 72
Score = 39.3 bits (90), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 33/56 (58%), Gaps = 2/56 (3%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVED 655
GI + EE L++ F ++G I +TL D + R RGFAF+ F D E++ K + D
Sbjct: 107 GIAPEHNEETLRDFFKQFGNITELTLMKDQSGHRHRGFAFVAFDD-EAVVKQLIND 161
>gi|345108301|emb|CBZ41969.1| deleted in azoospermia (Daz)-associated protein 1 [Botryllus
schlosseri]
Length = 333
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 93/173 (53%), Gaps = 21/173 (12%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + T++ L++HFS YGEI + D T SRGF F+ + D +V +V+
Sbjct: 14 GLTRETTDDMLRQHFSNYGEIVECIVMRDKLTQMSRGFGFVKYADA-----GAVAEVLKN 68
Query: 166 GNHVINNKKIEAKKAKAKS---------------GKIFVGGLSPEMKDEEIKAHFAQFGN 210
H ++NKKI+ K K+ KIF+GGL+ +EE+KA+F+Q+G+
Sbjct: 69 RPHTLDNKKIDPKPCTPKTIQQQKKNAQIEHTQTHKIFIGGLAQNATEEEVKAYFSQYGS 128
Query: 211 IIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ E +K +++ K F F+TFE ES V + +I K V+ K+ATP+
Sbjct: 129 VTEVVFVINKEENRHKGFGFVTFESESAVDQAVGKHFHEICGKRVEAKRATPR 181
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 47/79 (59%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GKIFVGGL+ E D+ ++ HF+ +G I+E + DK + F F+ + V ++LK
Sbjct: 8 GKIFVGGLTRETTDDMLRQHFSNYGEIVECIVMRDKLTQMSRGFGFVKYADAGAVAEVLK 67
Query: 245 NPKQKINDKEVDVKKATPK 263
N +++K++D K TPK
Sbjct: 68 NRPHTLDNKKIDPKPCTPK 86
>gi|225438019|ref|XP_002274734.1| PREDICTED: uncharacterized protein LOC100263471 [Vitis vinifera]
Length = 441
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 94/183 (51%), Gaps = 32/183 (17%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
GI TEE LKE+F++YG++ + D TGR RGF F+VF D SV D + +
Sbjct: 12 GIPWDTTEEKLKEYFNQYGDVTQTVIMRDKTTGRPRGFGFVVFAD------PSVLDAVLQ 65
Query: 166 GNHVINNKKIEAKKA-----------------KAKSG--------KIFVGGLSPEMKDEE 200
H I+ + +EAK+A ++ SG KIFVGGL + +E
Sbjct: 66 EKHTIDGRTVEAKRALSREEQHTSRPGNSNTGRSSSGMGGNFKTKKIFVGGLPSTLTEEG 125
Query: 201 IKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKA 260
+ +F +G++ + + YD++ + + F FI+F+ E V +L +N K V+VK+A
Sbjct: 126 FRQYFETYGHVTDVVVMYDQNTQRPRGFGFISFDTEDAVDRVLHKTFHDLNGKLVEVKRA 185
Query: 261 TPK 263
PK
Sbjct: 186 LPK 188
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GK+FVGG+ + +E++K +F Q+G++ +T + DK+ + + F F+ F SV+ +L+
Sbjct: 6 GKLFVGGIPWDTTEEKLKEYFNQYGDVTQTVIMRDKTTGRPRGFGFVVFADPSVLDAVLQ 65
Query: 245 NPKQKINDKEVDVKKATPKPE 265
K I+ + V+ K+A + E
Sbjct: 66 E-KHTIDGRTVEAKRALSREE 85
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 29/46 (63%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLE 649
D E+LKE+F++YG++ + D TGR RGF F+VF D L+
Sbjct: 16 DTTEEKLKEYFNQYGDVTQTVIMRDKTTGRPRGFGFVVFADPSVLD 61
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 593 KNKMVSHPGIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
K K + G+ +TEE +++F YG + +V + D NT R RGF FI F +++++
Sbjct: 108 KTKKIFVGGLPSTLTEEGFRQYFETYGHVTDVVVMYDQNTQRPRGFGFISFDTEDAVDR 166
>gi|222622445|gb|EEE56577.1| hypothetical protein OsJ_05928 [Oryza sativa Japonica Group]
Length = 510
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 91/169 (53%), Gaps = 18/169 (10%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + TEE +HF KYG I + + D +T RGF F+ F D SV D + E
Sbjct: 185 GVAWETTEESFSKHFEKYGAITDSVIMKDKHTKMPRGFGFVTFSD------PSVIDKVLE 238
Query: 166 GNHVINNKKIEAK----------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETE 215
HVI+ + +E K K K+ KIFVGGL + ++E++ HF+ +G I+E +
Sbjct: 239 DEHVIDGRTVEVKRTVPREEMSSKDGPKTRKIFVGGLPSSLTEDELREHFSPYGKIVEHQ 298
Query: 216 MPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQK-INDKEVDVKKATPK 263
+ D S + + F F+TFE E V ++ + + + K+V++KKA PK
Sbjct: 299 IMLDHSTGRSRGFGFVTFESEDSVERVISEGRMRDLGGKQVEIKKAEPK 347
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 49/82 (59%), Gaps = 1/82 (1%)
Query: 184 SGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLL 243
SGKIFVGG++ E +E HF ++G I ++ + DK + F F+TF SV+ +L
Sbjct: 178 SGKIFVGGVAWETTEESFSKHFEKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVIDKVL 237
Query: 244 KNPKQKINDKEVDVKKATPKPE 265
++ + I+ + V+VK+ P+ E
Sbjct: 238 ED-EHVIDGRTVEVKRTVPREE 258
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 601 GIVDKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
G+ +TE EL+EHFS YG+I + D +TGRSRGF F+ F+ +S+E+
Sbjct: 274 GLPSSLTEDELREHFSPYGKIVEHQIMLDHSTGRSRGFGFVTFESEDSVER 324
Score = 39.3 bits (90), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
G+ + TEE +HF KYG I + + D +T RGF F+ F D ++K
Sbjct: 185 GVAWETTEESFSKHFEKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVIDK 235
>gi|297743097|emb|CBI35964.3| unnamed protein product [Vitis vinifera]
Length = 353
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 91/169 (53%), Gaps = 18/169 (10%)
Query: 107 GIVHKITEEL-KEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
GI + +EE+ +FS YGEI + + D +TGR RGF FI F D +V D + E
Sbjct: 57 GISWETSEEIFTNYFSNYGEITDSVIMMDRHTGRPRGFGFITFAD------PAVADKVLE 110
Query: 166 GNHVINNKKIEAKKAKAKSG----------KIFVGGLSPEMKDEEIKAHFAQFGNIIETE 215
+HVI+ + +E KK + G KIFVGG+ + ++E+K +F+ +G I+E +
Sbjct: 111 EDHVIDGRAVEVKKTVPREGMEVRGVSKTRKIFVGGIPSSLTEDELKDYFSSYGAIVENQ 170
Query: 216 MPYDKSKSQRKNFCFITFEHESVVIDLLKNPK-QKINDKEVDVKKATPK 263
+ D + + F F+TF E V L K ++ K V++KKA PK
Sbjct: 171 IMLDHVTGRSRGFGFVTFVSEDAVERLFSEGKTHELGGKLVEIKKAEPK 219
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 50/88 (56%), Gaps = 2/88 (2%)
Query: 184 SGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLL 243
SGK+FVGG+S E +E +F+ +G I ++ + D+ + + F FITF +V +L
Sbjct: 50 SGKLFVGGISWETSEEIFTNYFSNYGEITDSVIMMDRHTGRPRGFGFITFADPAVADKVL 109
Query: 244 KNPKQKINDKEVDVKKATPKPEPFGVRG 271
+ I+ + V+VKK P+ E VRG
Sbjct: 110 EE-DHVIDGRAVEVKKTVPR-EGMEVRG 135
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 592 AKNKMVSHPGIVDKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+K + + GI +TE ELK++FS YG I + D TGRSRGF F+ F +++E+
Sbjct: 137 SKTRKIFVGGIPSSLTEDELKDYFSSYGAIVENQIMLDHVTGRSRGFGFVTFVSEDAVER 196
Score = 43.5 bits (101), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 601 GIVDKITEEL-KEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVED 655
GI + +EE+ +FS YGEI + + D +TGR RGF FI F D +K ED
Sbjct: 57 GISWETSEEIFTNYFSNYGEITDSVIMMDRHTGRPRGFGFITFADPAVADKVLEED 112
>gi|449468578|ref|XP_004151998.1| PREDICTED: DAZ-associated protein 1-like [Cucumis sativus]
gi|449509419|ref|XP_004163583.1| PREDICTED: DAZ-associated protein 1-like [Cucumis sativus]
Length = 436
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 100/198 (50%), Gaps = 36/198 (18%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
GI +EE L+++FS++GE+ + D TGR RGF F+VF D S+ D + +
Sbjct: 12 GIAWDTSEEKLRDYFSQFGEVIQAVIMRDKTTGRPRGFGFVVFSD------PSLLDQVLQ 65
Query: 166 GNHVINNKKIEAKKA--------KAKSG-----------------KIFVGGLSPEMKDEE 200
H I+ +++EAK+A +SG KIFVGGL + ++
Sbjct: 66 DKHTIDGRQVEAKRALSREEQQTSTRSGINNSGRSSGGSGYFRTKKIFVGGLPSALTEDG 125
Query: 201 IKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKA 260
+ +F +G + + + YD++ + + F FITF++E V +L ++N K V+VK+A
Sbjct: 126 FRQYFESYGQVTDVVIMYDQNTQRPRGFGFITFDNEDAVDRVLYKSFHELNGKLVEVKRA 185
Query: 261 TPKPEPFGVRGGRGGRGG 278
PK G GGR G
Sbjct: 186 LPKD----ANPGSGGRAG 199
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 53/81 (65%), Gaps = 1/81 (1%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GK+F+GG++ + +E+++ +F+QFG +I+ + DK+ + + F F+ F S++ +L+
Sbjct: 6 GKLFIGGIAWDTSEEKLRDYFSQFGEVIQAVIMRDKTTGRPRGFGFVVFSDPSLLDQVLQ 65
Query: 245 NPKQKINDKEVDVKKATPKPE 265
+ K I+ ++V+ K+A + E
Sbjct: 66 D-KHTIDGRQVEAKRALSREE 85
Score = 47.0 bits (110), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 30/47 (63%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D E+L+++FS++GE+ + D TGR RGF F+VF D L++
Sbjct: 16 DTSEEKLRDYFSQFGEVIQAVIMRDKTTGRPRGFGFVVFSDPSLLDQ 62
Score = 43.1 bits (100), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
G+ +TE+ +++F YG++ +V + D NT R RGF FI F + +++++
Sbjct: 116 GLPSALTEDGFRQYFESYGQVTDVVIMYDQNTQRPRGFGFITFDNEDAVDR 166
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 38/69 (55%), Gaps = 4/69 (5%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGV 503
++ + + YD++ + + F FITF++E V +L ++N K V+VK+A PK
Sbjct: 135 QVTDVVIMYDQNTQRPRGFGFITFDNEDAVDRVLYKSFHELNGKLVEVKRALPKD----A 190
Query: 504 RGGRGGRGG 512
G GGR G
Sbjct: 191 NPGSGGRAG 199
>gi|225447494|ref|XP_002267309.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 [Vitis
vinifera]
Length = 360
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 98/194 (50%), Gaps = 21/194 (10%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+ ++F KYGEI + + D TGR RGF FI + D SV D + + H+IN K
Sbjct: 32 DTFTKYFEKYGEITDSVVMKDRQTGRPRGFGFITYAD------PSVVDEVIQETHIINGK 85
Query: 174 KIEAKKA---------KAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQ 224
++E K+ K+ KIFVGG+ + ++E K F+++G ++E E+ +D +
Sbjct: 86 QVEIKRTIPRGSSQSNDFKTRKIFVGGILTSVSEDEFKNFFSKYGKVVEHEIIHDHVTKR 145
Query: 225 RKNFCFITFEHESVVIDLLKNPKQ-KINDKEVDVKKATPKPEPFGVRGGRGGRGGRGGRG 283
+ F FI F++E VV DLL N + +V++KKA PK GR G
Sbjct: 146 SRGFGFIVFDNEQVVDDLLTNGNMIDMEGTQVEIKKAEPKKS-----SSNPGRAPSFGGD 200
Query: 284 GRMAGGYGGYGGYG 297
RM G+ GYG
Sbjct: 201 SRMQMYNDGFSGYG 214
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 182 AKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVID 241
A GKIFVGGL+ E + +F ++G I ++ + D+ + + F FIT+ SVV +
Sbjct: 15 ASPGKIFVGGLAKETNLDTFTKYFEKYGEITDSVVMKDRQTGRPRGFGFITYADPSVVDE 74
Query: 242 LLKNPKQKINDKEVDVKKATPK 263
+++ IN K+V++K+ P+
Sbjct: 75 VIQE-THIINGKQVEIKRTIPR 95
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 47/79 (59%), Gaps = 7/79 (8%)
Query: 107 GIVHKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
GI+ ++E E K FSKYG++ + D T RSRGF FIVF D E + V+D++
Sbjct: 112 GILTSVSEDEFKNFFSKYGKVVEHEIIHDHVTKRSRGFGFIVF-DNEQV----VDDLLTN 166
Query: 166 GNHV-INNKKIEAKKAKAK 183
GN + + ++E KKA+ K
Sbjct: 167 GNMIDMEGTQVEIKKAEPK 185
Score = 40.0 bits (92), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 43/89 (48%), Gaps = 6/89 (6%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQ-KINDKEVDVKKATPKPEPFG 502
+++E E+ +D + + F FI F++E VV DLL N + +V++KKA PK
Sbjct: 131 KVVEHEIIHDHVTKRSRGFGFIVFDNEQVVDDLLTNGNMIDMEGTQVEIKKAEPKKS--- 187
Query: 503 VRGGRGGRGGRGGRGGRMAGGYGGYGGYG 531
GR G RM G+ GYG
Sbjct: 188 --SSNPGRAPSFGGDSRMQMYNDGFSGYG 214
Score = 38.9 bits (89), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Query: 601 GIVDKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLE 649
GI+ ++E E K FSKYG++ + D T RSRGF FIVF + + ++
Sbjct: 112 GILTSVSEDEFKNFFSKYGKVVEHEIIHDHVTKRSRGFGFIVFDNEQVVD 161
>gi|296813155|ref|XP_002846915.1| heterogeneous nuclear ribonucleoprotein HRP1 [Arthroderma otae CBS
113480]
gi|238842171|gb|EEQ31833.1| heterogeneous nuclear ribonucleoprotein HRP1 [Arthroderma otae CBS
113480]
Length = 482
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 86/150 (57%), Gaps = 12/150 (8%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+ LKE+FS++GE+ T+ D +GRSRGF F+ F D +++ +I+ K
Sbjct: 13 QSLKEYFSQFGEVHECTVMRDGASGRSRGFGFLTFTDPKTVNTV-----------MIDPK 61
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
+ + + ++ KIFVGG+S E ++E K F QFG +++ + DK + + F F+TF
Sbjct: 62 RAIPRDEQERTSKIFVGGVSQEATEQEFKQFFMQFGRVVDATLMIDKDTGRPRGFGFVTF 121
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ E+ V L P + I+ K ++VKKA P+
Sbjct: 122 DSEAAVEATLSVPLE-IHGKAIEVKKAQPR 150
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 39/68 (57%)
Query: 187 IFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNP 246
+F+GGL+ E D+ +K +F+QFG + E + D + + + F F+TF V ++ +P
Sbjct: 1 MFIGGLNWETTDQSLKEYFSQFGEVHECTVMRDGASGRSRGFGFLTFTDPKTVNTVMIDP 60
Query: 247 KQKINDKE 254
K+ I E
Sbjct: 61 KRAIPRDE 68
Score = 46.6 bits (109), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 31/47 (65%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVE 654
+ LKE+FS++GE+ T+ D +GRSRGF F+ F D +++ ++
Sbjct: 13 QSLKEYFSQFGEVHECTVMRDGASGRSRGFGFLTFTDPKTVNTVMID 59
Score = 42.7 bits (99), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 35/54 (64%), Gaps = 2/54 (3%)
Query: 601 GIVDKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASV 653
G+ + TE E K+ F ++G + + TL D +TGR RGF F+ F D+E+ +A++
Sbjct: 79 GVSQEATEQEFKQFFMQFGRVVDATLMIDKDTGRPRGFGFVTF-DSEAAVEATL 131
>gi|357462485|ref|XP_003601524.1| RNA-binding protein [Medicago truncatula]
gi|355490572|gb|AES71775.1| RNA-binding protein [Medicago truncatula]
Length = 370
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 72/228 (31%), Positives = 111/228 (48%), Gaps = 42/228 (18%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
EE ++F +YGEI + + D +TGR RGF FI + D ASV D + + NH+IN+K
Sbjct: 32 EEFVKYFERYGEITDSVIMKDRHTGRPRGFGFITYAD------ASVVDQVIQENHIINDK 85
Query: 174 KIEAKKA---------KAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQ 224
++E K+ K+ KIFVGG+ + ++E+K F++ GN++E E+ D + +
Sbjct: 86 QVEIKRTIPKGASQTNDFKTKKIFVGGIPATVSEDELKIFFSKHGNVVEHEIIRDHTTKR 145
Query: 225 RKNFCFITFEHESVVIDLLKNP-------------------KQKINDKEVDVKKATPKPE 265
+ F F+ F+ + V +LL + K + D V++KKA PK
Sbjct: 146 SRGFGFVVFDSDKAVDNLLADGNMIDMDDTQVSLVRLFMVFKIETGDATVEIKKAEPKKS 205
Query: 266 PFGVRGGRGGRGGRGGRGGRMAGGYGG----YGGY-GGGYGGILYKPL 308
G R GG+GG YG + GGGYG Y+ L
Sbjct: 206 ---SNSSSFPSFGSDSRARSYNGGFGGFDDSYGSFPGGGYGPASYRSL 250
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 182 AKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVID 241
A GKIF+GGL+ + EE +F ++G I ++ + D+ + + F FIT+ SVV D
Sbjct: 15 ASPGKIFIGGLAKDTTLEEFVKYFERYGEITDSVIMKDRHTGRPRGFGFITYADASVV-D 73
Query: 242 LLKNPKQKINDKEVDVKKATPK 263
+ INDK+V++K+ PK
Sbjct: 74 QVIQENHIINDKQVEIKRTIPK 95
Score = 43.1 bits (100), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 30/52 (57%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVED 655
D EE ++F +YGEI + + D +TGR RGF FI + D +++ E+
Sbjct: 28 DTTLEEFVKYFERYGEITDSVIMKDRHTGRPRGFGFITYADASVVDQVIQEN 79
>gi|452824817|gb|EME31817.1| heterogeneous nuclear ribonucleoprotein A1/A3 [Galdieria
sulphuraria]
Length = 345
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 91/179 (50%), Gaps = 18/179 (10%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+ L+ +F YGE+ + + D TG RGF F+ F+D SV D++A +H+++ +
Sbjct: 45 DSLRAYFEGYGEVADCVIMRDKYTGHPRGFGFVTFQDD------SVADLVASLSHILDGR 98
Query: 174 KIEAKKAKAKS------------GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKS 221
++EAKKA K+ K+FVGG+S DE+ +F +FG +++ + YD
Sbjct: 99 QVEAKKAVPKAEVSTKNETTKTTKKLFVGGISSSCSDEDFLVYFQKFGAVLDAHIMYDHQ 158
Query: 222 KSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGVRGGRGGRGGRG 280
+ + F FITF V + + P+ I K V+VK A PK + R + G G
Sbjct: 159 TGKSRGFGFITFCSVEAVDKVFQTPRHVIKGKVVEVKVAEPKHQSVESRKVKESESGTG 217
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 55/93 (59%), Gaps = 1/93 (1%)
Query: 173 KKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFIT 232
K ++ + + GK+FVGGLS E ++ ++A+F +G + + + DK + F F+T
Sbjct: 19 KLAQSGREEKNRGKVFVGGLSWETGEDSLRAYFEGYGEVADCVIMRDKYTGHPRGFGFVT 78
Query: 233 FEHESVVIDLLKNPKQKINDKEVDVKKATPKPE 265
F+ +SV DL+ + ++ ++V+ KKA PK E
Sbjct: 79 FQDDSVA-DLVASLSHILDGRQVEAKKAVPKAE 110
>gi|46806499|dbj|BAD17623.1| putative heterogeneous nuclearribonucleoprotein A2 [Oryza sativa
Japonica Group]
gi|46806518|dbj|BAD17631.1| putative heterogeneous nuclearribonucleoprotein A2 [Oryza sativa
Japonica Group]
Length = 374
Score = 99.0 bits (245), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 91/169 (53%), Gaps = 18/169 (10%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + TEE +HF KYG I + + D +T RGF F+ F D SV D + E
Sbjct: 72 GVAWETTEESFSKHFEKYGAITDSVIMKDKHTKMPRGFGFVTFSD------PSVIDKVLE 125
Query: 166 GNHVINNKKIEAK----------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETE 215
HVI+ + +E K K K+ KIFVGGL + ++E++ HF+ +G I+E +
Sbjct: 126 DEHVIDGRTVEVKRTVPREEMSSKDGPKTRKIFVGGLPSSLTEDELREHFSPYGKIVEHQ 185
Query: 216 MPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQK-INDKEVDVKKATPK 263
+ D S + + F F+TFE E V ++ + + + K+V++KKA PK
Sbjct: 186 IMLDHSTGRSRGFGFVTFESEDSVERVISEGRMRDLGGKQVEIKKAEPK 234
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 49/82 (59%), Gaps = 1/82 (1%)
Query: 184 SGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLL 243
SGKIFVGG++ E +E HF ++G I ++ + DK + F F+TF SV+ +L
Sbjct: 65 SGKIFVGGVAWETTEESFSKHFEKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVIDKVL 124
Query: 244 KNPKQKINDKEVDVKKATPKPE 265
++ + I+ + V+VK+ P+ E
Sbjct: 125 ED-EHVIDGRTVEVKRTVPREE 145
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 601 GIVDKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVE 654
G+ +TE EL+EHFS YG+I + D +TGRSRGF F+ F+ +S+E+ E
Sbjct: 161 GLPSSLTEDELREHFSPYGKIVEHQIMLDHSTGRSRGFGFVTFESEDSVERVISE 215
Score = 38.9 bits (89), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
G+ + TEE +HF KYG I + + D +T RGF F+ F D ++K
Sbjct: 72 GVAWETTEESFSKHFEKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVIDKV 123
>gi|21553963|gb|AAM63044.1| RNA-binding protein-like [Arabidopsis thaliana]
Length = 431
Score = 99.0 bits (245), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 92/173 (53%), Gaps = 16/173 (9%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
GI + +E+ L+++F +GE+ + D TGR+RGF F+VF D E+ + I +
Sbjct: 12 GISWETSEDRLRDYFHSFGEVLEAVIMKDRATGRARGFGFVVFADPNVAERVVLLKHIID 71
Query: 166 G------------NHVINNKK---IEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGN 210
G +HV+ NK ++ + S KIFVGGL+ + + E K +FAQFG
Sbjct: 72 GKIVEAKKAVPRDDHVVFNKSNSSLQGSPGPSNSKKIFVGGLASSVTEAEFKKYFAQFGM 131
Query: 211 IIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
I + + YD + + F FI+++ E V +L+ ++N K V+VK A PK
Sbjct: 132 ITDVVVMYDHRTQRPRGFGFISYDSEEAVDKVLQKTFHELNGKMVEVKLAVPK 184
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 26/43 (60%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+ L+++F +GE+ + D TGR+RGF F+VF D E+
Sbjct: 20 DRLRDYFHSFGEVLEAVIMKDRATGRARGFGFVVFADPNVAER 62
>gi|18422817|ref|NP_568685.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|30695248|ref|NP_851149.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|17528972|gb|AAL38696.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|23297042|gb|AAN13229.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|332008155|gb|AED95538.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332008156|gb|AED95539.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 431
Score = 99.0 bits (245), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 92/173 (53%), Gaps = 16/173 (9%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
GI + +E+ L+++F +GE+ + D TGR+RGF F+VF D E+ + I +
Sbjct: 12 GISWETSEDRLRDYFHSFGEVLEAVIMKDRATGRARGFGFVVFADPNVAERVVLLKHIID 71
Query: 166 G------------NHVINNKK---IEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGN 210
G +HV+ NK ++ + S KIFVGGL+ + + E K +FAQFG
Sbjct: 72 GKIVEAKKAVPRDDHVVFNKSNSSLQGSPGPSNSKKIFVGGLASSVTEAEFKKYFAQFGM 131
Query: 211 IIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
I + + YD + + F FI+++ E V +L+ ++N K V+VK A PK
Sbjct: 132 ITDVVVMYDHRTQRPRGFGFISYDSEEAVDKVLQKTFHELNGKMVEVKLAVPK 184
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 26/43 (60%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+ L+++F +GE+ + D TGR+RGF F+VF D E+
Sbjct: 20 DRLRDYFHSFGEVLEAVIMKDRATGRARGFGFVVFADPNVAER 62
>gi|444727070|gb|ELW67577.1| Phosphate-regulating neutral endopeptidase [Tupaia chinensis]
Length = 915
Score = 99.0 bits (245), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 54/134 (40%), Positives = 80/134 (59%), Gaps = 10/134 (7%)
Query: 135 PNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNKKIEAKKAKAKSGK-----IFV 189
P TG SRGF F++F+D ASV+ V+ H ++ K I+ K+AKA GK +FV
Sbjct: 497 PLTGTSRGFGFVLFEDA-----ASVDKVLELKEHKLDGKLIDPKRAKALKGKEPPKKVFV 551
Query: 190 GGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQK 249
GGLSP+ +E+IK +F FG I E+P + ++R+ FCFIT+ E V LL++ +
Sbjct: 552 GGLSPDTSEEQIKEYFGAFGEIENIELPMNTKTNERRGFCFITYTDEEPVNKLLESRYHQ 611
Query: 250 INDKEVDVKKATPK 263
I + ++K A PK
Sbjct: 612 IGSGKCEIKVAQPK 625
Score = 47.8 bits (112), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 38/70 (54%), Gaps = 5/70 (7%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
E++KE+F +GEIEN+ L + T RGF FI + D E + K ++ H I +
Sbjct: 561 EQIKEYFGAFGEIENIELPMNTKTNERRGFCFITYTDEEPVNK-----LLESRYHQIGSG 615
Query: 174 KIEAKKAKAK 183
K E K A+ K
Sbjct: 616 KCEIKVAQPK 625
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D E++KE+F +GEIEN+ L + T RGF FI + D E + K
Sbjct: 557 DTSEEQIKEYFGAFGEIENIELPMNTKTNERRGFCFITYTDEEPVNK 603
Score = 40.0 bits (92), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 31/54 (57%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 497
EI E+P + ++R+ FCFIT+ E V LL++ +I + ++K A PK
Sbjct: 572 EIENIELPMNTKTNERRGFCFITYTDEEPVNKLLESRYHQIGSGKCEIKVAQPK 625
>gi|302771077|ref|XP_002968957.1| hypothetical protein SELMODRAFT_68338 [Selaginella moellendorffii]
gi|302816651|ref|XP_002990004.1| hypothetical protein SELMODRAFT_48637 [Selaginella moellendorffii]
gi|300142315|gb|EFJ09017.1| hypothetical protein SELMODRAFT_48637 [Selaginella moellendorffii]
gi|300163462|gb|EFJ30073.1| hypothetical protein SELMODRAFT_68338 [Selaginella moellendorffii]
Length = 162
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 83/145 (57%), Gaps = 16/145 (11%)
Query: 113 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINN 172
TE+L+ HF KYGEI + + D ++G RGF F+ F D++ V D + HV++
Sbjct: 14 TEKLESHFKKYGEITDAVIMRDRSSGNPRGFGFVTFADSD------VCDRVLRDKHVLDG 67
Query: 173 KKIEAKKA----------KAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSK 222
+ +E K++ K+ KIFVGG+ P + +EE KA+F+ FGN+IE ++ D +
Sbjct: 68 RTVECKRSIPRESMLVVKGPKTKKIFVGGIPPSITEEEFKAYFSSFGNVIEHQIMQDHNT 127
Query: 223 SQRKNFCFITFEHESVVIDLLKNPK 247
+ + F FI F+ E V D+L + +
Sbjct: 128 GRSRGFGFIVFDSEQTVEDVLSHGR 152
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GKIF+GGLS + E++++HF ++G I + + D+S + F F+TF +S V D +
Sbjct: 1 GKIFIGGLSWDTTTEKLESHFKKYGEITDAVIMRDRSSGNPRGFGFVTFA-DSDVCDRVL 59
Query: 245 NPKQKINDKEVDVKKATPKPEPFGVRG 271
K ++ + V+ K++ P+ V+G
Sbjct: 60 RDKHVLDGRTVECKRSIPRESMLVVKG 86
Score = 47.4 bits (111), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 30/48 (62%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
D TE+L+ HF KYGEI + + D ++G RGF F+ F D++ ++
Sbjct: 11 DTTTEKLESHFKKYGEITDAVIMRDRSSGNPRGFGFVTFADSDVCDRV 58
Score = 46.2 bits (108), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 593 KNKMVSHPGIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLE 649
K K + GI ITEE K +FS +G + + D NTGRSRGF FIVF +++E
Sbjct: 88 KTKKIFVGGIPPSITEEEFKAYFSSFGNVIEHQIMQDHNTGRSRGFGFIVFDSEQTVE 145
>gi|297744195|emb|CBI37165.3| unnamed protein product [Vitis vinifera]
Length = 234
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 93/183 (50%), Gaps = 32/183 (17%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
GI TEE LKE+F++YG++ + D TGR RGF F+VF D SV D + +
Sbjct: 12 GIPWDTTEEKLKEYFNQYGDVTQTVIMRDKTTGRPRGFGFVVFAD------PSVLDAVLQ 65
Query: 166 GNHVINNKKIEAKKAKA-------------------------KSGKIFVGGLSPEMKDEE 200
H I+ + +EAK+A + K+ KIFVGGL + +E
Sbjct: 66 EKHTIDGRTVEAKRALSREEQHTSRPGNSNTGRSSSGMGGNFKTKKIFVGGLPSTLTEEG 125
Query: 201 IKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKA 260
+ +F +G++ + + YD++ + + F FI+F+ E V +L +N K V+VK+A
Sbjct: 126 FRQYFETYGHVTDVVVMYDQNTQRPRGFGFISFDTEDAVDRVLHKTFHDLNGKLVEVKRA 185
Query: 261 TPK 263
PK
Sbjct: 186 LPK 188
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 58/111 (52%), Gaps = 8/111 (7%)
Query: 182 AKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVID 241
+ GK+FVGG+ + +E++K +F Q+G++ +T + DK+ + + F F+ F S V+D
Sbjct: 3 SDEGKLFVGGIPWDTTEEKLKEYFNQYGDVTQTVIMRDKTTGRPRGFGFVVFADPS-VLD 61
Query: 242 LLKNPKQKINDKEVDVKKATPKPEPFGVRGGRGGRGGRGGRGGRMAGGYGG 292
+ K I+ + V+ K+A + E R G GR + G GG
Sbjct: 62 AVLQEKHTIDGRTVEAKRALSREEQHTSRPGNSNT-------GRSSSGMGG 105
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 29/46 (63%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLE 649
D E+LKE+F++YG++ + D TGR RGF F+VF D L+
Sbjct: 16 DTTEEKLKEYFNQYGDVTQTVIMRDKTTGRPRGFGFVVFADPSVLD 61
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 593 KNKMVSHPGIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
K K + G+ +TEE +++F YG + +V + D NT R RGF FI F +++++
Sbjct: 108 KTKKIFVGGLPSTLTEEGFRQYFETYGHVTDVVVMYDQNTQRPRGFGFISFDTEDAVDRV 167
>gi|115445085|ref|NP_001046322.1| Os02g0221500 [Oryza sativa Japonica Group]
gi|46806500|dbj|BAD17624.1| putative heterogeneous nuclearribonucleoprotein A2 [Oryza sativa
Japonica Group]
gi|46806519|dbj|BAD17632.1| putative heterogeneous nuclearribonucleoprotein A2 [Oryza sativa
Japonica Group]
gi|113535853|dbj|BAF08236.1| Os02g0221500 [Oryza sativa Japonica Group]
Length = 397
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 91/169 (53%), Gaps = 18/169 (10%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + TEE +HF KYG I + + D +T RGF F+ F D SV D + E
Sbjct: 72 GVAWETTEESFSKHFEKYGAITDSVIMKDKHTKMPRGFGFVTFSD------PSVIDKVLE 125
Query: 166 GNHVINNKKIEAK----------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETE 215
HVI+ + +E K K K+ KIFVGGL + ++E++ HF+ +G I+E +
Sbjct: 126 DEHVIDGRTVEVKRTVPREEMSSKDGPKTRKIFVGGLPSSLTEDELREHFSPYGKIVEHQ 185
Query: 216 MPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQK-INDKEVDVKKATPK 263
+ D S + + F F+TFE E V ++ + + + K+V++KKA PK
Sbjct: 186 IMLDHSTGRSRGFGFVTFESEDSVERVISEGRMRDLGGKQVEIKKAEPK 234
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 49/82 (59%), Gaps = 1/82 (1%)
Query: 184 SGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLL 243
SGKIFVGG++ E +E HF ++G I ++ + DK + F F+TF SV+ +L
Sbjct: 65 SGKIFVGGVAWETTEESFSKHFEKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVIDKVL 124
Query: 244 KNPKQKINDKEVDVKKATPKPE 265
++ + I+ + V+VK+ P+ E
Sbjct: 125 ED-EHVIDGRTVEVKRTVPREE 145
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 601 GIVDKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVE 654
G+ +TE EL+EHFS YG+I + D +TGRSRGF F+ F+ +S+E+ E
Sbjct: 161 GLPSSLTEDELREHFSPYGKIVEHQIMLDHSTGRSRGFGFVTFESEDSVERVISE 215
>gi|392575433|gb|EIW68566.1| hypothetical protein TREMEDRAFT_74094 [Tremella mesenterica DSM
1558]
Length = 466
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 95/155 (61%), Gaps = 12/155 (7%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
E+L+ + S++GEI+ T+ DP TGRSRGFAF+ + D ASV V+ + +H ++ K
Sbjct: 125 EKLRAYMSEFGEIDACTVMRDP-TGRSRGFAFLTYVD-----PASVTKVLGQTHH-LDGK 177
Query: 174 KIEAKKA-----KAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNF 228
+I+ K+A K+ K+FVGGL+ + E ++ + FG +++ + D+ ++ K F
Sbjct: 178 QIDPKRAIPRAEHEKTAKVFVGGLAATVTSESLRTFLSTFGGVLDATVMIDRDTNRSKGF 237
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
F TFE+E V+ ++ +++ K+++++KA P+
Sbjct: 238 AFATFENEDGVLKAMEASGSELDGKQIEIRKAQPR 272
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GK+F+GGL+ E DE+++A+ ++FG I + D + R F F+T+ + V +L
Sbjct: 111 GKMFIGGLNWETTDEKLRAYMSEFGEIDACTVMRDPTGRSR-GFAFLTYVDPASVTKVLG 169
Query: 245 NPKQKINDKEVDVKKATPKPE 265
++ K++D K+A P+ E
Sbjct: 170 Q-THHLDGKQIDPKRAIPRAE 189
Score = 45.8 bits (107), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 31/43 (72%), Gaps = 1/43 (2%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
E+L+ + S++GEI+ T+ DP TGRSRGFAF+ + D S+ K
Sbjct: 125 EKLRAYMSEFGEIDACTVMRDP-TGRSRGFAFLTYVDPASVTK 166
Score = 42.0 bits (97), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 6/88 (6%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ +T E L+ S +G + + T+ D +T RS+GFAF F++ + + KA + A
Sbjct: 200 GLAATVTSESLRTFLSTFGGVLDATVMIDRDTNRSKGFAFATFENEDGVLKA----MEAS 255
Query: 166 GNHVINNKKIEAKKAKAKSGKIFVGGLS 193
G+ ++ K+IE +KA+ + G S
Sbjct: 256 GSE-LDGKQIEIRKAQPRGAGTQPGKFS 282
>gi|291408115|ref|XP_002720404.1| PREDICTED: mCG62132-like [Oryctolagus cuniculus]
Length = 498
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 92/161 (57%), Gaps = 11/161 (6%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + I++E L + S++GEI ++ +K +P+TG S+GF F++FKD+ A+VE V+
Sbjct: 45 GLPYNISKETLLNYLSQFGEILDIMIKLNPDTGLSKGFGFVLFKDS-----AAVEKVLQV 99
Query: 166 GNHVINNKKIEAKKAKA-----KSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDK 220
H ++ +KI+ K+A+A K+FVGGL+P + +I+ +F FG I E+P
Sbjct: 100 KEHKLDGRKIDIKRARAMEPKFPRKKVFVGGLNPHTSEVKIREYFGNFGEIESIELPVCP 159
Query: 221 SKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKAT 261
R+ FCFIT+ E V LL+ + ++K A
Sbjct: 160 RTKTRQAFCFITYTSEIPVRKLLETRYHLVGSGRCEIKIAA 200
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 49/87 (56%)
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
+IEA K + K+FVGGL + E + + +QFG I++ + + K F F+ F
Sbjct: 28 RIEATKTQQDDNKLFVGGLPYNISKETLLNYLSQFGEILDIMIKLNPDTGLSKGFGFVLF 87
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKA 260
+ + V +L+ + K++ +++D+K+A
Sbjct: 88 KDSAAVEKVLQVKEHKLDGRKIDIKRA 114
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 33/43 (76%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
E L + S++GEI ++ +K +P+TG S+GF F++FKD+ ++EK
Sbjct: 53 ETLLNYLSQFGEILDIMIKLNPDTGLSKGFGFVLFKDSAAVEK 95
>gi|133256|sp|P21522.1|ROA1_SCHAM RecName: Full=Heterogeneous nuclear ribonucleoprotein A1, A2/B1
homolog
gi|10107|emb|CAA38481.1| mammalian A1, A2 /B1 hnRNP homologue [Schistocerca americana]
Length = 342
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 90/164 (54%), Gaps = 7/164 (4%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFK------DTESLEKASV 159
G+ ++ T+E LK+HF ++GEI +V + DP T RSRGF FI + D ++ V
Sbjct: 23 GLDYRTTDESLKQHFEQWGEIVDVVVMKDPKTKRSRGFGFITYSRAHMVDDAQNARPHKV 82
Query: 160 EDVIAEGNHVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYD 219
+ + E + +I +A A K+FVGG+ EM++ +++ +F Q+G ++ + D
Sbjct: 83 DGRVVEPKRAVPRTEIGRPEAGATVKKLFVGGIKEEMEENDLRDYFKQYGTVVSAAIVVD 142
Query: 220 KSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
K +++ F F+ F+ V + + +I K +DVKKA PK
Sbjct: 143 KETRKKRGFAFVEFDDYDPVDKICLSRNHQIRGKHIDVKKALPK 186
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 43/80 (53%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+F+GGL DE +K HF Q+G I++ + D + + F FIT+ +V D
Sbjct: 18 KLFIGGLDYRTTDESLKQHFEQWGEIVDVVVMKDPKTKRSRGFGFITYSRAHMVDDAQNA 77
Query: 246 PKQKINDKEVDVKKATPKPE 265
K++ + V+ K+A P+ E
Sbjct: 78 RPHKVDGRVVEPKRAVPRTE 97
Score = 47.0 bits (110), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 28/45 (62%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKAS 652
E LK+HF ++GEI +V + DP T RSRGF FI + ++ A
Sbjct: 31 ESLKQHFEQWGEIVDVVVMKDPKTKRSRGFGFITYSRAHMVDDAQ 75
>gi|307940742|gb|ADN95985.1| G-strand specific single-stranded telomere-binding protein 3
[Nicotiana tabacum]
Length = 339
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/198 (35%), Positives = 104/198 (52%), Gaps = 24/198 (12%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
E+ ++F KYGEI + + D +TGR RGF FI ++D + V+ VIAE H+IN+K
Sbjct: 29 EQFVKYFEKYGEIIDSVIMKDRHTGRPRGFGFITYEDP-----SVVDTVIAE-YHIINDK 82
Query: 174 KIEAKKA---------KAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQ 224
++E K+ K+ KIFVGG+ M ++E K F++FG + E E+ D +
Sbjct: 83 QVEIKRTIPKGSAESKDFKTKKIFVGGIPTTMTEDEFKNFFSKFGKVTEYEIIRDHVSKR 142
Query: 225 RKNFCFITFEHESVVIDLLKNPKQ-KINDKEVDVKKATPKPEPFGVRGGRGGRGGRGGRG 283
+ F FI F++E VV +LL + + +V++KKA PK G RG
Sbjct: 143 SRGFGFIVFDNEQVVDNLLAEGNRIDMMGTQVEIKKAEPKKPSNPASAPAYGSDSRG--- 199
Query: 284 GRMAGGYG-GYGGYGGGY 300
GYG YGG+G Y
Sbjct: 200 ----RGYGDSYGGFGNSY 213
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 182 AKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVID 241
A GKIF+GGL+ E E+ +F ++G II++ + D+ + + F FIT+E SVV D
Sbjct: 12 ASPGKIFIGGLAKETTLEQFVKYFEKYGEIIDSVIMKDRHTGRPRGFGFITYEDPSVV-D 70
Query: 242 LLKNPKQKINDKEVDVKKATPK 263
+ INDK+V++K+ PK
Sbjct: 71 TVIAEYHIINDKQVEIKRTIPK 92
Score = 40.4 bits (93), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 28/47 (59%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVE 654
E+ ++F KYGEI + + D +TGR RGF FI ++D ++ E
Sbjct: 29 EQFVKYFEKYGEIIDSVIMKDRHTGRPRGFGFITYEDPSVVDTVIAE 75
>gi|366992097|ref|XP_003675814.1| hypothetical protein NCAS_0C04600 [Naumovozyma castellii CBS 4309]
gi|342301679|emb|CCC69450.1| hypothetical protein NCAS_0C04600 [Naumovozyma castellii CBS 4309]
Length = 581
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 97/163 (59%), Gaps = 12/163 (7%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + TE+ LK +FSKYG + + + D TGRSRGF F+ F++ S+ D + +
Sbjct: 202 GLNWETTEDGLKNYFSKYGNVVELKIMKDGATGRSRGFGFLTFENPSSV------DEVVK 255
Query: 166 GNHVINNKKIEAKKA-----KAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDK 220
H+++ K I+ K++ + K+GKIFVGG+ +++ +E + FAQ+G II+ ++ DK
Sbjct: 256 TQHILDGKVIDPKRSIPREEQDKTGKIFVGGIGTDVRPKEFEDFFAQYGTIIDAQLMLDK 315
Query: 221 SKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ + F F+T++ V + +N + K++++K+A P+
Sbjct: 316 DTGRSRGFGFVTYDSGDAVDRVCQNKYIEFKGKQIEIKRAEPR 358
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 54/80 (67%), Gaps = 1/80 (1%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+F+GGL+ E ++ +K +F+++GN++E ++ D + + + F F+TFE+ S V +++K
Sbjct: 197 KMFIGGLNWETTEDGLKNYFSKYGNVVELKIMKDGATGRSRGFGFLTFENPSSVDEVVKT 256
Query: 246 PKQKINDKEVDVKKATPKPE 265
+ ++ K +D K++ P+ E
Sbjct: 257 -QHILDGKVIDPKRSIPREE 275
Score = 42.7 bits (99), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 28/41 (68%)
Query: 610 LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
LK +FSKYG + + + D TGRSRGF F+ F++ S+++
Sbjct: 212 LKNYFSKYGNVVELKIMKDGATGRSRGFGFLTFENPSSVDE 252
Score = 39.3 bits (90), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 30/48 (62%)
Query: 603 VDKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D +E ++ F++YG I + L D +TGRSRGF F+ + +++++
Sbjct: 289 TDVRPKEFEDFFAQYGTIIDAQLMLDKDTGRSRGFGFVTYDSGDAVDR 336
>gi|398396946|ref|XP_003851931.1| hypothetical protein MYCGRDRAFT_28846, partial [Zymoseptoria
tritici IPO323]
gi|339471811|gb|EGP86907.1| hypothetical protein MYCGRDRAFT_28846 [Zymoseptoria tritici IPO323]
Length = 161
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 91/155 (58%), Gaps = 12/155 (7%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+ LK++FS++GE+ T+ D +GRSRGF F+ FKD +++ V++ H ++ K
Sbjct: 14 QSLKDYFSQFGEVVECTVMRDGQSGRSRGFGFLTFKDPKTVNTVMVKE------HSLDGK 67
Query: 174 KIEAKKA-----KAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNF 228
I+ K+A + ++ KIFVGG+S E +++ K F QFG +++ + DK + + F
Sbjct: 68 LIDPKRAIPRDEQERTAKIFVGGVSQEATEQDFKEFFMQFGRVLDATLMMDKDTGRPRGF 127
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
F+TF+ E V L+ P I K ++VK+A P+
Sbjct: 128 GFVTFDDEKAVERTLEGP-LAILGKGIEVKRAQPR 161
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+F+GGL+ E D+ +K +F+QFG ++E + D + + F F+TF+ V ++
Sbjct: 1 KMFIGGLNWETTDQSLKDYFSQFGEVVECTVMRDGQSGRSRGFGFLTFKDPKTVNTVMVK 60
Query: 246 PKQKINDKEVDVKKATPKPE 265
+ ++ K +D K+A P+ E
Sbjct: 61 -EHSLDGKLIDPKRAIPRDE 79
Score = 46.6 bits (109), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 33/48 (68%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVED 655
+ LK++FS++GE+ T+ D +GRSRGF F+ FKD +++ V++
Sbjct: 14 QSLKDYFSQFGEVVECTVMRDGQSGRSRGFGFLTFKDPKTVNTVMVKE 61
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
G+ + TE+ KE F ++G + + TL D +TGR RGF F+ F D +++E+
Sbjct: 90 GVSQEATEQDFKEFFMQFGRVLDATLMMDKDTGRPRGFGFVTFDDEKAVERT 141
>gi|317183317|gb|ADV15462.1| LD46071p [Drosophila melanogaster]
Length = 396
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 91/164 (55%), Gaps = 7/164 (4%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKAS------V 159
G+ ++ T+E LK HF K+G I +V + DP T RSRGF FI + + +++A +
Sbjct: 68 GLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFITYSHSSMIDEAQKSRPHKI 127
Query: 160 EDVIAEGNHVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYD 219
+ + E + + I++ A A K+FVG L + ++ I+ +F FGNI++ + D
Sbjct: 128 DGRVVEPKRAVPRQDIDSPNAGATVKKLFVGALKDDHDEQSIRDYFQHFGNIVDINIVID 187
Query: 220 KSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
K +++ F F+ F+ V ++ + ++N K VDVKKA PK
Sbjct: 188 KETGKKRGFAFVEFDDYDPVDKVVLQKQHQLNGKMVDVKKALPK 231
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 49/80 (61%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+F+GGL DE +KAHF ++GNI++ + D + + F FIT+ H S++ + K+
Sbjct: 63 KLFIGGLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFITYSHSSMIDEAQKS 122
Query: 246 PKQKINDKEVDVKKATPKPE 265
KI+ + V+ K+A P+ +
Sbjct: 123 RPHKIDGRVVEPKRAVPRQD 142
Score = 46.2 bits (108), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 28/45 (62%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKAS 652
E LK HF K+G I +V + DP T RSRGF FI + + +++A
Sbjct: 76 ENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFITYSHSSMIDEAQ 120
Score = 39.3 bits (90), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 31/51 (60%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVE 654
D + ++++F +G I ++ + D TG+ RGFAF+ F D + ++K ++
Sbjct: 163 DHDEQSIRDYFQHFGNIVDINIVIDKETGKKRGFAFVEFDDYDPVDKVVLQ 213
>gi|9758790|dbj|BAB09088.1| RNA-binding protein-like [Arabidopsis thaliana]
Length = 404
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 92/173 (53%), Gaps = 16/173 (9%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
GI + +E+ L+++F +GE+ + D TGR+RGF F+VF D E+ + I +
Sbjct: 12 GISWETSEDRLRDYFHSFGEVLEAVIMKDRATGRARGFGFVVFADPNVAERVVLLKHIID 71
Query: 166 G------------NHVINNKK---IEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGN 210
G +HV+ NK ++ + S KIFVGGL+ + + E K +FAQFG
Sbjct: 72 GKIVEAKKAVPRDDHVVFNKSNSSLQGSPGPSNSKKIFVGGLASSVTEAEFKKYFAQFGM 131
Query: 211 IIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
I + + YD + + F FI+++ E V +L+ ++N K V+VK A PK
Sbjct: 132 ITDVVVMYDHRTQRPRGFGFISYDSEEAVDKVLQKTFHELNGKMVEVKLAVPK 184
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 26/43 (60%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+ L+++F +GE+ + D TGR+RGF F+VF D E+
Sbjct: 20 DRLRDYFHSFGEVLEAVIMKDRATGRARGFGFVVFADPNVAER 62
>gi|24650831|ref|NP_733249.1| heterogeneous nuclear ribonucleoprotein at 98DE, isoform A
[Drosophila melanogaster]
gi|157652|gb|AAA28622.1| nuclear ribonucleoprotein [Drosophila melanogaster]
gi|23172509|gb|AAF56800.2| heterogeneous nuclear ribonucleoprotein at 98DE, isoform A
[Drosophila melanogaster]
Length = 364
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 91/164 (55%), Gaps = 7/164 (4%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKAS------V 159
G+ ++ T+E LK HF K+G I +V + DP T RSRGF FI + + +++A +
Sbjct: 36 GLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFITYSHSSMIDEAQKSRPHKI 95
Query: 160 EDVIAEGNHVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYD 219
+ + E + + I++ A A K+FVG L + ++ I+ +F FGNI++ + D
Sbjct: 96 DGRVVEPKRAVPRQDIDSPNAGATVKKLFVGALKDDHDEQSIRDYFQHFGNIVDINIVID 155
Query: 220 KSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
K +++ F F+ F+ V ++ + ++N K VDVKKA PK
Sbjct: 156 KETGKKRGFAFVEFDDYDPVDKVVLQKQHQLNGKMVDVKKALPK 199
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 49/80 (61%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+F+GGL DE +KAHF ++GNI++ + D + + F FIT+ H S++ + K+
Sbjct: 31 KLFIGGLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFITYSHSSMIDEAQKS 90
Query: 246 PKQKINDKEVDVKKATPKPE 265
KI+ + V+ K+A P+ +
Sbjct: 91 RPHKIDGRVVEPKRAVPRQD 110
Score = 46.2 bits (108), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 28/45 (62%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKAS 652
E LK HF K+G I +V + DP T RSRGF FI + + +++A
Sbjct: 44 ENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFITYSHSSMIDEAQ 88
Score = 39.3 bits (90), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 31/51 (60%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVE 654
D + ++++F +G I ++ + D TG+ RGFAF+ F D + ++K ++
Sbjct: 131 DHDEQSIRDYFQHFGNIVDINIVIDKETGKKRGFAFVEFDDYDPVDKVVLQ 181
>gi|357619641|gb|EHJ72131.1| heterogeneous nuclear ribonucleoprotein A1 [Danaus plexippus]
Length = 315
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 91/164 (55%), Gaps = 7/164 (4%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKAS------V 159
G+ ++ ++E LK HF K+GEI +V + DP T RSRGF FI + ++ A +
Sbjct: 23 GLNYRTSDESLKAHFEKWGEIVDVVVMKDPKTKRSRGFGFITYSKAHMVDDAQLNRPHRI 82
Query: 160 EDVIAEGNHVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYD 219
+ + E + + I+ +A A K+F+GG+ + +E+++ +F+ +GN+ + D
Sbjct: 83 DGRMVETKRAVARQDIKNPEAGATVKKLFIGGIKDDHDEEQLREYFSNYGNVQNVSIVTD 142
Query: 220 KSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
K +++ F F+ F+ V + N KIN K++DVKKA PK
Sbjct: 143 KGTGKKRGFGFVEFDDYDPVDKICLNAPHKINGKQLDVKKALPK 186
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 45/80 (56%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
KIF+GGL+ DE +KAHF ++G I++ + D + + F FIT+ +V D N
Sbjct: 18 KIFIGGLNYRTSDESLKAHFEKWGEIVDVVVMKDPKTKRSRGFGFITYSKAHMVDDAQLN 77
Query: 246 PKQKINDKEVDVKKATPKPE 265
+I+ + V+ K+A + +
Sbjct: 78 RPHRIDGRMVETKRAVARQD 97
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 33/47 (70%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D E+L+E+FS YG ++NV++ +D TG+ RGF F+ F D + ++K
Sbjct: 118 DHDEEQLREYFSNYGNVQNVSIVTDKGTGKKRGFGFVEFDDYDPVDK 164
Score = 47.8 bits (112), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 28/46 (60%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASV 653
E LK HF K+GEI +V + DP T RSRGF FI + ++ A +
Sbjct: 31 ESLKAHFEKWGEIVDVVVMKDPKTKRSRGFGFITYSKAHMVDDAQL 76
>gi|399218335|emb|CCF75222.1| unnamed protein product [Babesia microti strain RI]
Length = 436
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 104/188 (55%), Gaps = 20/188 (10%)
Query: 95 IMEAKNKMVSH--PGIVHKIT--EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKD 150
IM +K + H G + ++T E L++HF YGE+ + + + N+GRSRGF F+ F
Sbjct: 27 IMASKVGKICHIFVGGLSQVTTQESLRQHFETYGEMTDCVVMVEANSGRSRGFGFVTFVS 86
Query: 151 TESLEKASVEDVIAEG----------NHVINNKKIEAKKAKA----KSGKIFVGGLSPEM 196
++LE I +G V+N+ KA ++ KIFVGGL P++
Sbjct: 87 HDALEAVLASKQIVDGKEVDCKKACPREVMNSNNGALPKAAQVGVFRTDKIFVGGL-PDL 145
Query: 197 KDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN-PKQKINDKEV 255
+EE + +F +FG ++E + DK+ ++ + F FITFE SVV ++++ + + K V
Sbjct: 146 TNEEFREYFEKFGTVLEATLMVDKNTNKPRGFGFITFESPSVVNEVIRRYNEHTLKGKWV 205
Query: 256 DVKKATPK 263
+VKKATP+
Sbjct: 206 EVKKATPR 213
Score = 45.8 bits (107), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 28/42 (66%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLE 649
E L++HF YGE+ + + + N+GRSRGF F+ F ++LE
Sbjct: 50 ESLRQHFETYGEMTDCVVMVEANSGRSRGFGFVTFVSHDALE 91
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 26/43 (60%)
Query: 601 GIVDKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFK 643
G+ D EE +E+F K+G + TL D NT + RGF FI F+
Sbjct: 141 GLPDLTNEEFREYFEKFGTVLEATLMVDKNTNKPRGFGFITFE 183
>gi|225458908|ref|XP_002283509.1| PREDICTED: uncharacterized protein LOC100255821 [Vitis vinifera]
Length = 471
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 93/172 (54%), Gaps = 19/172 (11%)
Query: 107 GIVHKITEEL-KEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ ITE L +++FSKYG + ++ D GF F+ F D SL +A ++D +
Sbjct: 11 GVSGAITEGLLRDYFSKYGTVVETYIRRDSGRTPRGGFGFVTFADAASLSRA-LQD---Q 66
Query: 166 GNHVINNKKIEAKKAKAK--------------SGKIFVGGLSPEMKDEEIKAHFAQFGNI 211
H I +++E K+A K S KIFVGGLS + +EE K +F +FG I
Sbjct: 67 QQHFIQGQRVEVKRAMNKGQRNLDGSGNNNFTSKKIFVGGLSSNLTEEEFKNYFERFGRI 126
Query: 212 IETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ + +D + + + F FITFE E V +++N ++N K V+VK+A PK
Sbjct: 127 TDVVVMHDSATRRPRGFGFITFESEESVEHVMQNNFYELNGKRVEVKRAVPK 178
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+FVGG+S + + ++ +F+++G ++ET + D ++ R F F+TF + + L++
Sbjct: 6 KLFVGGVSGAITEGLLRDYFSKYGTVVETYIRRDSGRTPRGGFGFVTFADAASLSRALQD 65
Query: 246 PKQK-INDKEVDVKKATPK 263
+Q I + V+VK+A K
Sbjct: 66 QQQHFIQGQRVEVKRAMNK 84
Score = 43.9 bits (102), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVY 657
G+ +TEE K +F ++G I +V + D T R RGF FI F+ ES+E + Y
Sbjct: 106 GLSSNLTEEEFKNYFERFGRITDVVVMHDSATRRPRGFGFITFESEESVEHVMQNNFY 163
Score = 39.7 bits (91), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 32/53 (60%)
Query: 445 IIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 497
I + + +D + + + F FITFE E V +++N ++N K V+VK+A PK
Sbjct: 126 ITDVVVMHDSATRRPRGFGFITFESEESVEHVMQNNFYELNGKRVEVKRAVPK 178
>gi|224064856|ref|XP_002301585.1| predicted protein [Populus trichocarpa]
gi|222843311|gb|EEE80858.1| predicted protein [Populus trichocarpa]
Length = 479
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/247 (31%), Positives = 114/247 (46%), Gaps = 57/247 (23%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
E LK++F +GE+ + D TGR+RGF F+VF D E+ VI E H I+ +
Sbjct: 20 ERLKDYFQSFGEVVEAVIMKDRTTGRARGFGFVVFSDPSIAER-----VIKE-KHSIDGR 73
Query: 174 KIEAKKA----------------------KAKSGKIFVGGLSPEMKDEEIKAHFAQFGNI 211
+EAKKA ++ KIFVGGL+ + + + + +F QFG I
Sbjct: 74 MVEAKKAVPRDDQNMLSRNSGGSIHGSPGPGRTKKIFVGGLASTVTESDFRKYFDQFGLI 133
Query: 212 IETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKP-EPFGVR 270
+ + YD + + + F FIT++ E V +L ++N K V+VK+A PK P R
Sbjct: 134 TDVVVMYDHNTQRPRGFGFITYDSEEAVDKVLMKTFHELNGKMVEVKRAVPKELSPGPSR 193
Query: 271 GGRGGR--------------------GGRGGRGGRM-------AGGYGGYGGYGGGYG-G 302
GG G GG G RM AGG G+ +G GYG G
Sbjct: 194 SPLGGYNYGLNRVNSLLNGYTQGYTPGAVGGYGLRMDDRFSLVAGGRSGFPPFGSGYGMG 253
Query: 303 ILYKPLL 309
+ ++P L
Sbjct: 254 LNFEPAL 260
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Query: 181 KAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVI 240
++ SGK+F+GG+S + +E +K +F FG ++E + D++ + + F F+ F S+
Sbjct: 2 QSDSGKLFIGGISWDTNEERLKDYFQSFGEVVEAVIMKDRTTGRARGFGFVVFSDPSIAE 61
Query: 241 DLLKNPKQKINDKEVDVKKATPKPE 265
++K K I+ + V+ KKA P+ +
Sbjct: 62 RVIKE-KHSIDGRMVEAKKAVPRDD 85
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 27/47 (57%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D E LK++F +GE+ + D TGR+RGF F+VF D E+
Sbjct: 16 DTNEERLKDYFQSFGEVVEAVIMKDRTTGRARGFGFVVFSDPSIAER 62
Score = 38.9 bits (89), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 30/53 (56%)
Query: 445 IIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 497
I + + YD + + + F FIT++ E V +L ++N K V+VK+A PK
Sbjct: 133 ITDVVVMYDHNTQRPRGFGFITYDSEEAVDKVLMKTFHELNGKMVEVKRAVPK 185
>gi|24650833|ref|NP_733250.1| heterogeneous nuclear ribonucleoprotein at 98DE, isoform E
[Drosophila melanogaster]
gi|157653|gb|AAA28623.1| nuclear ribonucleoprotein [Drosophila melanogaster]
gi|23172510|gb|AAN14141.1| heterogeneous nuclear ribonucleoprotein at 98DE, isoform E
[Drosophila melanogaster]
gi|259089588|gb|ACV91650.1| RE34829p [Drosophila melanogaster]
Length = 360
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 91/164 (55%), Gaps = 7/164 (4%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKAS------V 159
G+ ++ T+E LK HF K+G I +V + DP T RSRGF FI + + +++A +
Sbjct: 32 GLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFITYSHSSMIDEAQKSRPHKI 91
Query: 160 EDVIAEGNHVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYD 219
+ + E + + I++ A A K+FVG L + ++ I+ +F FGNI++ + D
Sbjct: 92 DGRVVEPKRAVPRQDIDSPNAGATVKKLFVGALKDDHDEQSIRDYFQHFGNIVDINIVID 151
Query: 220 KSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
K +++ F F+ F+ V ++ + ++N K VDVKKA PK
Sbjct: 152 KETGKKRGFAFVEFDDYDPVDKVVLQKQHQLNGKMVDVKKALPK 195
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 49/80 (61%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+F+GGL DE +KAHF ++GNI++ + D + + F FIT+ H S++ + K+
Sbjct: 27 KLFIGGLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFITYSHSSMIDEAQKS 86
Query: 246 PKQKINDKEVDVKKATPKPE 265
KI+ + V+ K+A P+ +
Sbjct: 87 RPHKIDGRVVEPKRAVPRQD 106
Score = 46.6 bits (109), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 28/45 (62%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKAS 652
E LK HF K+G I +V + DP T RSRGF FI + + +++A
Sbjct: 40 ENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFITYSHSSMIDEAQ 84
Score = 39.3 bits (90), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 31/51 (60%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVE 654
D + ++++F +G I ++ + D TG+ RGFAF+ F D + ++K ++
Sbjct: 127 DHDEQSIRDYFQHFGNIVDINIVIDKETGKKRGFAFVEFDDYDPVDKVVLQ 177
>gi|164661105|ref|XP_001731675.1| hypothetical protein MGL_0943 [Malassezia globosa CBS 7966]
gi|159105576|gb|EDP44461.1| hypothetical protein MGL_0943 [Malassezia globosa CBS 7966]
Length = 367
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 90/153 (58%), Gaps = 1/153 (0%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
E L+ +F ++G + + T+ D +GRSRGFAF+ F D +S+ V + +G +I+ K
Sbjct: 13 ESLRRYFGQFGPVTSCTVMRDGASGRSRGFAFVTFSDPKSVNAVMVREHFLDGK-IIDPK 71
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
+ + ++K+ K FVGGL + + K F QFG+++++ + DK + + F F+TF
Sbjct: 72 RAIPRPEQSKTQKCFVGGLPQTVTQDSFKQLFQQFGHVLDSTVMMDKDTGRPRGFGFVTF 131
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKATPKPEP 266
E++ V + L + ++ K+++VK+A + +P
Sbjct: 132 ENDDGVENTLAHQPLLLDGKQIEVKRAQSRGQP 164
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Query: 187 IFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNP 246
+FVGGL+ + +E ++ +F QFG + + D + + + F F+TF V ++
Sbjct: 1 MFVGGLNWDTDEESLRRYFGQFGPVTSCTVMRDGASGRSRGFAFVTFSDPKSVNAVMVR- 59
Query: 247 KQKINDKEVDVKKATPKPE 265
+ ++ K +D K+A P+PE
Sbjct: 60 EHFLDGKIIDPKRAIPRPE 78
Score = 47.0 bits (110), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 32/55 (58%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYF 658
D E L+ +F ++G + + T+ D +GRSRGFAF+ F D +S+ V + +
Sbjct: 9 DTDEESLRRYFGQFGPVTSCTVMRDGASGRSRGFAFVTFSDPKSVNAVMVREHFL 63
Score = 40.4 bits (93), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLE 649
G+ +T++ K+ F ++G + + T+ D +TGR RGF F+ F++ + +E
Sbjct: 89 GLPQTVTQDSFKQLFQQFGHVLDSTVMMDKDTGRPRGFGFVTFENDDGVE 138
>gi|17738267|ref|NP_524543.1| heterogeneous nuclear ribonucleoprotein at 98DE, isoform B
[Drosophila melanogaster]
gi|24650836|ref|NP_733251.1| heterogeneous nuclear ribonucleoprotein at 98DE, isoform C
[Drosophila melanogaster]
gi|133253|sp|P07909.1|ROA1_DROME RecName: Full=Heterogeneous nuclear ribonucleoprotein A1;
Short=hnRNP A1; AltName: Full=PEN repeat clone P9;
AltName: Full=hnRNP core protein A1-A
gi|157654|gb|AAA28624.1| nulcear ribonucleoprotein [Drosophila melanogaster]
gi|908757|gb|AAA70426.1| unknown protein [Drosophila melanogaster]
gi|7301687|gb|AAF56801.1| heterogeneous nuclear ribonucleoprotein at 98DE, isoform B
[Drosophila melanogaster]
gi|23172511|gb|AAN14142.1| heterogeneous nuclear ribonucleoprotein at 98DE, isoform C
[Drosophila melanogaster]
Length = 365
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 91/164 (55%), Gaps = 7/164 (4%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKAS------V 159
G+ ++ T+E LK HF K+G I +V + DP T RSRGF FI + + +++A +
Sbjct: 37 GLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFITYSHSSMIDEAQKSRPHKI 96
Query: 160 EDVIAEGNHVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYD 219
+ + E + + I++ A A K+FVG L + ++ I+ +F FGNI++ + D
Sbjct: 97 DGRVVEPKRAVPRQDIDSPNAGATVKKLFVGALKDDHDEQSIRDYFQHFGNIVDINIVID 156
Query: 220 KSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
K +++ F F+ F+ V ++ + ++N K VDVKKA PK
Sbjct: 157 KETGKKRGFAFVEFDDYDPVDKVVLQKQHQLNGKMVDVKKALPK 200
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 49/80 (61%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+F+GGL DE +KAHF ++GNI++ + D + + F FIT+ H S++ + K+
Sbjct: 32 KLFIGGLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFITYSHSSMIDEAQKS 91
Query: 246 PKQKINDKEVDVKKATPKPE 265
KI+ + V+ K+A P+ +
Sbjct: 92 RPHKIDGRVVEPKRAVPRQD 111
Score = 46.6 bits (109), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 28/45 (62%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKAS 652
E LK HF K+G I +V + DP T RSRGF FI + + +++A
Sbjct: 45 ENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFITYSHSSMIDEAQ 89
Score = 39.3 bits (90), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 31/51 (60%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVE 654
D + ++++F +G I ++ + D TG+ RGFAF+ F D + ++K ++
Sbjct: 132 DHDEQSIRDYFQHFGNIVDINIVIDKETGKKRGFAFVEFDDYDPVDKVVLQ 182
>gi|356547577|ref|XP_003542187.1| PREDICTED: DAZ-associated protein 1-like [Glycine max]
Length = 352
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/160 (34%), Positives = 90/160 (56%), Gaps = 16/160 (10%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
E ++F KYGEI + + D +TGR RGF FI + D SV D + + NHV+N K
Sbjct: 32 ETFVKYFEKYGEITDSVIMKDRHTGRPRGFGFITYAD------PSVVDQVIQENHVVNGK 85
Query: 174 KIEAKKA---------KAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQ 224
++E K+ K+ KIFVGG+ + ++E+K F+++G ++E E+ D + +
Sbjct: 86 QVEIKRTIPKGSSQANDFKTKKIFVGGIPTSVSEDELKNFFSKYGKVVEHEIIRDHTTKR 145
Query: 225 RKNFCFITFEHESVVIDLLKNPKQ-KINDKEVDVKKATPK 263
+ F FI F+ E VV ++L + + +V++KKA PK
Sbjct: 146 SRGFGFIVFDSEKVVDNILADGNMIDMGGTQVEIKKAEPK 185
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Query: 182 AKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVID 241
A GKIF+GGL+ + E +F ++G I ++ + D+ + + F FIT+ SVV D
Sbjct: 15 ASPGKIFIGGLAKDTTLETFVKYFEKYGEITDSVIMKDRHTGRPRGFGFITYADPSVV-D 73
Query: 242 LLKNPKQKINDKEVDVKKATPK 263
+ +N K+V++K+ PK
Sbjct: 74 QVIQENHVVNGKQVEIKRTIPK 95
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 29/52 (55%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVED 655
D E ++F KYGEI + + D +TGR RGF FI + D +++ E+
Sbjct: 28 DTTLETFVKYFEKYGEITDSVIMKDRHTGRPRGFGFITYADPSVVDQVIQEN 79
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Query: 593 KNKMVSHPGIVDKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESL 648
K K + GI ++E ELK FSKYG++ + D T RSRGF FIVF D+E +
Sbjct: 104 KTKKIFVGGIPTSVSEDELKNFFSKYGKVVEHEIIRDHTTKRSRGFGFIVF-DSEKV 159
>gi|24650838|ref|NP_733252.1| heterogeneous nuclear ribonucleoprotein at 98DE, isoform D
[Drosophila melanogaster]
gi|24650840|ref|NP_733253.1| heterogeneous nuclear ribonucleoprotein at 98DE, isoform F
[Drosophila melanogaster]
gi|157651|gb|AAA28621.1| nuclear ribonucleoprotein [Drosophila melanogaster]
gi|16769554|gb|AAL28996.1| LD38464p [Drosophila melanogaster]
gi|23172512|gb|AAN14143.1| heterogeneous nuclear ribonucleoprotein at 98DE, isoform D
[Drosophila melanogaster]
gi|23172513|gb|AAN14144.1| heterogeneous nuclear ribonucleoprotein at 98DE, isoform F
[Drosophila melanogaster]
Length = 361
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 91/164 (55%), Gaps = 7/164 (4%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKAS------V 159
G+ ++ T+E LK HF K+G I +V + DP T RSRGF FI + + +++A +
Sbjct: 33 GLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFITYSHSSMIDEAQKSRPHKI 92
Query: 160 EDVIAEGNHVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYD 219
+ + E + + I++ A A K+FVG L + ++ I+ +F FGNI++ + D
Sbjct: 93 DGRVVEPKRAVPRQDIDSPNAGATVKKLFVGALKDDHDEQSIRDYFQHFGNIVDINIVID 152
Query: 220 KSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
K +++ F F+ F+ V ++ + ++N K VDVKKA PK
Sbjct: 153 KETGKKRGFAFVEFDDYDPVDKVVLQKQHQLNGKMVDVKKALPK 196
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 49/80 (61%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+F+GGL DE +KAHF ++GNI++ + D + + F FIT+ H S++ + K+
Sbjct: 28 KLFIGGLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFITYSHSSMIDEAQKS 87
Query: 246 PKQKINDKEVDVKKATPKPE 265
KI+ + V+ K+A P+ +
Sbjct: 88 RPHKIDGRVVEPKRAVPRQD 107
Score = 46.6 bits (109), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 28/45 (62%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKAS 652
E LK HF K+G I +V + DP T RSRGF FI + + +++A
Sbjct: 41 ENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFITYSHSSMIDEAQ 85
Score = 39.3 bits (90), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 31/51 (60%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVE 654
D + ++++F +G I ++ + D TG+ RGFAF+ F D + ++K ++
Sbjct: 128 DHDEQSIRDYFQHFGNIVDINIVIDKETGKKRGFAFVEFDDYDPVDKVVLQ 178
>gi|317453642|gb|ADV19029.1| AT02853p [Drosophila melanogaster]
Length = 372
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 91/164 (55%), Gaps = 7/164 (4%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKAS------V 159
G+ ++ T+E LK HF K+G I +V + DP T RSRGF FI + + +++A +
Sbjct: 44 GLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFITYSHSSMIDEAQKSRPHKI 103
Query: 160 EDVIAEGNHVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYD 219
+ + E + + I++ A A K+FVG L + ++ I+ +F FGNI++ + D
Sbjct: 104 DGRVVEPKRAVPRQDIDSPNAGATVKKLFVGALKDDHDEQSIRDYFQHFGNIVDINIVID 163
Query: 220 KSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
K +++ F F+ F+ V ++ + ++N K VDVKKA PK
Sbjct: 164 KETGKKRGFAFVEFDDYDPVDKVVLQKQHQLNGKMVDVKKALPK 207
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 49/80 (61%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+F+GGL DE +KAHF ++GNI++ + D + + F FIT+ H S++ + K+
Sbjct: 39 KLFIGGLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFITYSHSSMIDEAQKS 98
Query: 246 PKQKINDKEVDVKKATPKPE 265
KI+ + V+ K+A P+ +
Sbjct: 99 RPHKIDGRVVEPKRAVPRQD 118
Score = 46.2 bits (108), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 28/45 (62%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKAS 652
E LK HF K+G I +V + DP T RSRGF FI + + +++A
Sbjct: 52 ENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFITYSHSSMIDEAQ 96
Score = 39.3 bits (90), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 31/51 (60%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVE 654
D + ++++F +G I ++ + D TG+ RGFAF+ F D + ++K ++
Sbjct: 139 DHDEQSIRDYFQHFGNIVDINIVIDKETGKKRGFAFVEFDDYDPVDKVVLQ 189
>gi|440632909|gb|ELR02828.1| hypothetical protein GMDG_05764 [Geomyces destructans 20631-21]
Length = 544
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/150 (34%), Positives = 90/150 (60%), Gaps = 2/150 (1%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+ LK++FS++GE+ T+ D +GRSRGF F+ FKD ++ V++ +G +I+ K
Sbjct: 116 QSLKDYFSQFGEVVECTVMRDGASGRSRGFGFLTFKDARTVNVVMVKEHYLDG-KIIDPK 174
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
+ + + ++ KIFVGG+S E + + K +F QFG +++ + DK + + F F+TF
Sbjct: 175 RAIPRDEQERTSKIFVGGVSQEASELDFKEYFMQFGRVVDATLMMDKDTGRPRGFGFVTF 234
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ E+ V D N +I K ++VKKA P+
Sbjct: 235 DSEAAV-DACINIPLEILGKPIEVKKAQPR 263
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 53/83 (63%), Gaps = 1/83 (1%)
Query: 183 KSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDL 242
+ GK+F+GGL+ E D+ +K +F+QFG ++E + D + + + F F+TF+ ++ +++
Sbjct: 100 EDGKMFIGGLNWETTDQSLKDYFSQFGEVVECTVMRDGASGRSRGFGFLTFK-DARTVNV 158
Query: 243 LKNPKQKINDKEVDVKKATPKPE 265
+ + ++ K +D K+A P+ E
Sbjct: 159 VMVKEHYLDGKIIDPKRAIPRDE 181
Score = 47.0 bits (110), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 33/51 (64%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYF 658
+ LK++FS++GE+ T+ D +GRSRGF F+ FKD ++ V++ Y
Sbjct: 116 QSLKDYFSQFGEVVECTVMRDGASGRSRGFGFLTFKDARTVNVVMVKEHYL 166
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 34/54 (62%), Gaps = 2/54 (3%)
Query: 601 GIVDKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASV 653
G+ + +E + KE+F ++G + + TL D +TGR RGF F+ F D+E+ A +
Sbjct: 192 GVSQEASELDFKEYFMQFGRVVDATLMMDKDTGRPRGFGFVTF-DSEAAVDACI 244
>gi|195353064|ref|XP_002043030.1| GM16385 [Drosophila sechellia]
gi|194127095|gb|EDW49138.1| GM16385 [Drosophila sechellia]
Length = 363
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 91/164 (55%), Gaps = 7/164 (4%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKAS------V 159
G+ ++ T+E LK HF K+G I +V + DP T RSRGF FI + + +++A +
Sbjct: 35 GLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFITYSHSSMIDEAQKSRPHKI 94
Query: 160 EDVIAEGNHVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYD 219
+ + E + + I++ A A K+FVG L + ++ I+ +F FGNI++ + D
Sbjct: 95 DGRVVEPKRAVPRQDIDSPNAGATVKKLFVGALKDDHDEQSIRDYFQNFGNIVDINIVID 154
Query: 220 KSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
K +++ F F+ F+ V ++ + ++N K VDVKKA PK
Sbjct: 155 KETGKKRGFAFVEFDDYDPVDKVVLQKQHQLNGKMVDVKKALPK 198
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 49/80 (61%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+F+GGL DE +KAHF ++GNI++ + D + + F FIT+ H S++ + K+
Sbjct: 30 KLFIGGLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFITYSHSSMIDEAQKS 89
Query: 246 PKQKINDKEVDVKKATPKPE 265
KI+ + V+ K+A P+ +
Sbjct: 90 RPHKIDGRVVEPKRAVPRQD 109
Score = 46.6 bits (109), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 28/45 (62%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKAS 652
E LK HF K+G I +V + DP T RSRGF FI + + +++A
Sbjct: 43 ENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFITYSHSSMIDEAQ 87
Score = 39.7 bits (91), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 31/51 (60%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVE 654
D + ++++F +G I ++ + D TG+ RGFAF+ F D + ++K ++
Sbjct: 130 DHDEQSIRDYFQNFGNIVDINIVIDKETGKKRGFAFVEFDDYDPVDKVVLQ 180
>gi|195445835|ref|XP_002070507.1| GK12096 [Drosophila willistoni]
gi|194166592|gb|EDW81493.1| GK12096 [Drosophila willistoni]
Length = 385
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 87/156 (55%), Gaps = 6/156 (3%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKAS------VEDVIAEGN 167
E LK HF K+G+I +V + DP T RSRGF FI + + +++A ++ + E
Sbjct: 44 ENLKAHFEKWGQIVDVVVMKDPRTKRSRGFGFITYSHSSMIDEAQKARPHKIDGRVVEPK 103
Query: 168 HVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKN 227
+ + I++ A A K+FVG L + ++ ++ +F+ FG+I++ + DK +++
Sbjct: 104 RAVPRQDIDSPNAGATVKKLFVGALKDDHDEQSLRDYFSNFGSIVDINIVMDKETGKKRG 163
Query: 228 FCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
F F+ F+ V ++ + ++N K VDVKKA PK
Sbjct: 164 FAFVEFDDYDPVDKVVLQKQHQLNGKMVDVKKALPK 199
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 47/80 (58%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+F+GGL DE +KAHF ++G I++ + D + + F FIT+ H S++ + K
Sbjct: 31 KLFIGGLDYRTSDENLKAHFEKWGQIVDVVVMKDPRTKRSRGFGFITYSHSSMIDEAQKA 90
Query: 246 PKQKINDKEVDVKKATPKPE 265
KI+ + V+ K+A P+ +
Sbjct: 91 RPHKIDGRVVEPKRAVPRQD 110
Score = 47.8 bits (112), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 29/45 (64%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKAS 652
E LK HF K+G+I +V + DP T RSRGF FI + + +++A
Sbjct: 44 ENLKAHFEKWGQIVDVVVMKDPRTKRSRGFGFITYSHSSMIDEAQ 88
Score = 42.7 bits (99), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 32/51 (62%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVE 654
D + L+++FS +G I ++ + D TG+ RGFAF+ F D + ++K ++
Sbjct: 131 DHDEQSLRDYFSNFGSIVDINIVMDKETGKKRGFAFVEFDDYDPVDKVVLQ 181
>gi|195113003|ref|XP_002001061.1| GI10577 [Drosophila mojavensis]
gi|193917655|gb|EDW16522.1| GI10577 [Drosophila mojavensis]
Length = 359
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 92/164 (56%), Gaps = 7/164 (4%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKAS------V 159
G+ ++ T++ LK HF K+G+I +V + DP T RSRGF FI + + +++A +
Sbjct: 33 GLDYRTTDDNLKAHFEKWGQIVDVVVMKDPRTKRSRGFGFITYSHSSMVDEAQKARPHKI 92
Query: 160 EDVIAEGNHVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYD 219
+ + E + + I++ A A K+FVG L + ++ ++ +F +GNI++ + D
Sbjct: 93 DGRVVEPKRAVPRQDIDSPNAGATVKKLFVGALKDDHDEQSLRDYFQHYGNIVDINIVMD 152
Query: 220 KSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
K +++ F F+ F+ V ++ + ++N K VDVKKA PK
Sbjct: 153 KETGKKRGFAFVEFDDYDPVDKVVLQKQHQLNGKMVDVKKALPK 196
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 47/80 (58%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+F+GGL D+ +KAHF ++G I++ + D + + F FIT+ H S+V + K
Sbjct: 28 KLFIGGLDYRTTDDNLKAHFEKWGQIVDVVVMKDPRTKRSRGFGFITYSHSSMVDEAQKA 87
Query: 246 PKQKINDKEVDVKKATPKPE 265
KI+ + V+ K+A P+ +
Sbjct: 88 RPHKIDGRVVEPKRAVPRQD 107
Score = 46.2 bits (108), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 29/45 (64%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKAS 652
+ LK HF K+G+I +V + DP T RSRGF FI + + +++A
Sbjct: 41 DNLKAHFEKWGQIVDVVVMKDPRTKRSRGFGFITYSHSSMVDEAQ 85
Score = 42.7 bits (99), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 31/51 (60%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVE 654
D + L+++F YG I ++ + D TG+ RGFAF+ F D + ++K ++
Sbjct: 128 DHDEQSLRDYFQHYGNIVDINIVMDKETGKKRGFAFVEFDDYDPVDKVVLQ 178
>gi|359482522|ref|XP_002276110.2| PREDICTED: nucleolin-like [Vitis vinifera]
Length = 501
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 91/169 (53%), Gaps = 18/169 (10%)
Query: 107 GIVHKITEEL-KEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
GI + +EE+ +FS YGEI + + D +TGR RGF FI F D +V D + E
Sbjct: 205 GISWETSEEIFTNYFSNYGEITDSVIMMDRHTGRPRGFGFITFAD------PAVADKVLE 258
Query: 166 GNHVINNKKIEAKKAKAKSG----------KIFVGGLSPEMKDEEIKAHFAQFGNIIETE 215
+HVI+ + +E KK + G KIFVGG+ + ++E+K +F+ +G I+E +
Sbjct: 259 EDHVIDGRAVEVKKTVPREGMEVRGVSKTRKIFVGGIPSSLTEDELKDYFSSYGAIVENQ 318
Query: 216 MPYDKSKSQRKNFCFITFEHESVVIDLLKNPK-QKINDKEVDVKKATPK 263
+ D + + F F+TF E V L K ++ K V++KKA PK
Sbjct: 319 IMLDHVTGRSRGFGFVTFVSEDAVERLFSEGKTHELGGKLVEIKKAEPK 367
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 48/86 (55%), Gaps = 2/86 (2%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+FVGG+S E +E +F+ +G I ++ + D+ + + F FITF +V +L+
Sbjct: 200 KLFVGGISWETSEEIFTNYFSNYGEITDSVIMMDRHTGRPRGFGFITFADPAVADKVLEE 259
Query: 246 PKQKINDKEVDVKKATPKPEPFGVRG 271
I+ + V+VKK P+ E VRG
Sbjct: 260 -DHVIDGRAVEVKKTVPR-EGMEVRG 283
Score = 43.9 bits (102), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 592 AKNKMVSHPGIVDKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+K + + GI +TE ELK++FS YG I + D TGRSRGF F+ F +++E+
Sbjct: 285 SKTRKIFVGGIPSSLTEDELKDYFSSYGAIVENQIMLDHVTGRSRGFGFVTFVSEDAVER 344
Score = 43.1 bits (100), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 601 GIVDKITEEL-KEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVED 655
GI + +EE+ +FS YGEI + + D +TGR RGF FI F D +K ED
Sbjct: 205 GISWETSEEIFTNYFSNYGEITDSVIMMDRHTGRPRGFGFITFADPAVADKVLEED 260
>gi|347828861|emb|CCD44558.1| hypothetical protein [Botryotinia fuckeliana]
Length = 508
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 105/204 (51%), Gaps = 37/204 (18%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVED------------ 161
E LK++FS++GE+ T+ D +GRSRGF F+ FKD ++ V++
Sbjct: 13 ESLKDYFSQFGEVLECTVMRDGASGRSRGFGFLTFKDARTVNIVMVKEHYLDGKIVRPDL 72
Query: 162 ----------------VIAEGNHVINNKKIEAKKA-----KAKSGKIFVGGLSPEMKDEE 200
+ ++G H KI+ K+A + ++ KIFVGG+S + +++
Sbjct: 73 KTFNNSLRSYPSKFLLLASKGTHSHTTFKIDPKRAIPRDEQERTSKIFVGGVSQDASEQD 132
Query: 201 IKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKA 260
K +F QFG +++ + DK + + F F+TF+ E+ V L+ P + I+ K ++VKKA
Sbjct: 133 FKEYFTQFGRVVDATLMMDKDTGRPRGFGFVTFDSEAAVEACLEAPLE-IHGKPIEVKKA 191
Query: 261 TPK---PEPFGVRGGRGGRGGRGG 281
P+ E +G RG R +GG
Sbjct: 192 QPRGNIREEEETKGPRGSRFKKGG 215
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 33/51 (64%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYF 658
E LK++FS++GE+ T+ D +GRSRGF F+ FKD ++ V++ Y
Sbjct: 13 ESLKDYFSQFGEVLECTVMRDGASGRSRGFGFLTFKDARTVNIVMVKEHYL 63
Score = 45.4 bits (106), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVE 654
D ++ KE+F+++G + + TL D +TGR RGF F+ F D+E+ +A +E
Sbjct: 127 DASEQDFKEYFTQFGRVVDATLMMDKDTGRPRGFGFVTF-DSEAAVEACLE 176
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 33/53 (62%)
Query: 187 IFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVV 239
+F+GGL+ E DE +K +F+QFG ++E + D + + + F F+TF+ V
Sbjct: 1 MFIGGLNWETTDESLKDYFSQFGEVLECTVMRDGASGRSRGFGFLTFKDARTV 53
>gi|125577795|gb|EAZ19017.1| hypothetical protein OsJ_34549 [Oryza sativa Japonica Group]
Length = 481
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 98/198 (49%), Gaps = 30/198 (15%)
Query: 96 MEAKNKMVSHPGIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESL 154
MEA + GI E+ L+E+F KYGE+ + D TGR+RGF FIVF D
Sbjct: 1 MEADAGKLFIGGISWDTNEDRLREYFDKYGEVVEAVIMRDRATGRARGFGFIVFADPAVA 60
Query: 155 EKASVEDVIAEGNHVINNKK--------IEAKKAK--------AKSG------------- 185
E+ +E + +G + ++ +EAKKA +KSG
Sbjct: 61 ERVIMEKHMIDGRMIHDDDDGVLDPSMVVEAKKAVPRDDQHALSKSGGSAHGSPGPSRTK 120
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
KIFVGGL+ + + + + +F QFG I + + YD + + + F FIT++ E V L
Sbjct: 121 KIFVGGLASTVTEADFRKYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFK 180
Query: 246 PKQKINDKEVDVKKATPK 263
++N K V+VK+A PK
Sbjct: 181 TFHELNGKMVEVKRAVPK 198
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 30/51 (58%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVE 654
D + L+E+F KYGE+ + D TGR+RGF FIVF D E+ +E
Sbjct: 16 DTNEDRLREYFDKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVIME 66
Score = 46.6 bits (109), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 53/98 (54%), Gaps = 13/98 (13%)
Query: 181 KAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEH----E 236
+A +GK+F+GG+S + ++ ++ +F ++G ++E + D++ + + F FI F E
Sbjct: 2 EADAGKLFIGGISWDTNEDRLREYFDKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAE 61
Query: 237 SVVIDLLKNPKQKINDKE---------VDVKKATPKPE 265
V+++ + I+D + V+ KKA P+ +
Sbjct: 62 RVIMEKHMIDGRMIHDDDDGVLDPSMVVEAKKAVPRDD 99
Score = 42.4 bits (98), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Query: 592 AKNKMVSHPGIVDKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
++ K + G+ +TE + +++F ++G I +V + D NT R RGF FI + ++++K
Sbjct: 117 SRTKKIFVGGLASTVTEADFRKYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDK 176
Query: 651 A 651
A
Sbjct: 177 A 177
>gi|297790889|ref|XP_002863329.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297309164|gb|EFH39588.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 431
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 92/179 (51%), Gaps = 28/179 (15%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
GI + +E+ L+E+F +GE+ + D TGR+RGF F+VF D E+ +
Sbjct: 12 GISWETSEDRLREYFHSFGEVLEAVIMKDRATGRARGFGFVVFADPIVAERVVLL----- 66
Query: 166 GNHVINNKKIEAKKA---------------------KAKSGKIFVGGLSPEMKDEEIKAH 204
H+I+ K +EAKKA + + KIFVGGL+ + + E K +
Sbjct: 67 -KHIIDGKIVEAKKAVPRDDHAVFNKSNSSLQGSPGPSTTKKIFVGGLASSVTEAEFKKY 125
Query: 205 FAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
FAQFG I + + YD + + F FI+++ E V +L+ ++N K V+VK A PK
Sbjct: 126 FAQFGMITDVVVMYDHRTQRPRGFGFISYDSEDAVDKVLQKTFHELNGKMVEVKLAVPK 184
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 26/43 (60%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+ L+E+F +GE+ + D TGR+RGF F+VF D E+
Sbjct: 20 DRLREYFHSFGEVLEAVIMKDRATGRARGFGFVVFADPIVAER 62
>gi|268564135|ref|XP_002647098.1| C. briggsae CBR-MSI-1 protein [Caenorhabditis briggsae]
Length = 318
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 89/160 (55%), Gaps = 14/160 (8%)
Query: 113 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINN 172
E L+++F ++GE+ + DP T R+RGF FI F +E +SV+ V+ +H ++
Sbjct: 55 AENLRDYFGRFGEVNECMVMRDPATKRARGFGFITF-----VEPSSVDKVLNARDHELDG 109
Query: 173 KKIEAK---------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKS 223
KKI+ K K K+ K+F+GGLS E++K +F +G + + + YDK+
Sbjct: 110 KKIDPKVAFPKRTQAKLVTKTKKVFIGGLSATSTLEDMKQYFESYGKVEDAMLMYDKATQ 169
Query: 224 QRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ + F F+TF+ + V + + +IN K V+ KKA PK
Sbjct: 170 RHRGFGFVTFDSDEVADKVCEIHFHEINGKMVECKKAQPK 209
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 54/110 (49%)
Query: 154 LEKASVEDVIAEGNHVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIE 213
+ + S ++V +N + GK+F+GGLS + E ++ +F +FG + E
Sbjct: 11 IREQSPQEVDGHEEARLNADSDDGSHGSQDPGKMFIGGLSWQTTAENLRDYFGRFGEVNE 70
Query: 214 TEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ D + + + F FITF S V +L +++ K++D K A PK
Sbjct: 71 CMVMRDPATKRARGFGFITFVEPSSVDKVLNARDHELDGKKIDPKVAFPK 120
Score = 43.9 bits (102), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 28/44 (63%)
Query: 607 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
E L+++F ++GE+ + DP T R+RGF FI F + S++K
Sbjct: 55 AENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVEPSSVDK 98
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 32/52 (61%), Gaps = 2/52 (3%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFY 659
E++K++F YG++E+ L D T R RGF F+ F E +K V +++F+
Sbjct: 145 EDMKQYFESYGKVEDAMLMYDKATQRHRGFGFVTFDSDEVADK--VCEIHFH 194
>gi|391339574|ref|XP_003744123.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1-like
[Metaseiulus occidentalis]
Length = 334
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 100/170 (58%), Gaps = 16/170 (9%)
Query: 107 GIVHKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ +K E LKE++SK+GEI + + +DP + RSRGF F+ + D++ +++A +A+
Sbjct: 29 GLDYKTNEVTLKEYYSKWGEIMDCVVMTDPYSKRSRGFGFVTYADSQMVDQA-----MAQ 83
Query: 166 GNHVINNKKIEAKKA---KAKSG-------KIFVGGLSPEMKDEEIKAHFAQFGNIIETE 215
H+I+N+ +E K+A + SG K+FVGGLS E + E+++ +F ++G+I E
Sbjct: 84 RPHIIDNRTVEPKRAIPREQSSGDTNMSVKKLFVGGLSTETEAEDLRNYFGKYGSIEEVI 143
Query: 216 MPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE 265
+ ++ +++ F F+TF+ V ++ I K +VKKA K E
Sbjct: 144 IATERDTGRKRGFGFVTFDDYDSVDKVVLQRHHMIKGKRTEVKKALSKIE 193
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 33/48 (68%)
Query: 607 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVE 654
E+L+ +F KYG IE V + ++ +TGR RGF F+ F D +S++K ++
Sbjct: 126 AEDLRNYFGKYGSIEEVIIATERDTGRKRGFGFVTFDDYDSVDKVVLQ 173
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 40/63 (63%), Gaps = 2/63 (3%)
Query: 601 GIVDKITEE--LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYF 658
G +D T E LKE++SK+GEI + + +DP + RSRGF F+ + D++ +++A + +
Sbjct: 28 GGLDYKTNEVTLKEYYSKWGEIMDCVVMTDPYSKRSRGFGFVTYADSQMVDQAMAQRPHI 87
Query: 659 YSN 661
N
Sbjct: 88 IDN 90
Score = 42.7 bits (99), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 19/83 (22%), Positives = 45/83 (54%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+F+GGL + + +K +++++G I++ + D + + F F+T+ +V +
Sbjct: 24 KLFIGGLDYKTNEVTLKEYYSKWGEIMDCVVMTDPYSKRSRGFGFVTYADSQMVDQAMAQ 83
Query: 246 PKQKINDKEVDVKKATPKPEPFG 268
I+++ V+ K+A P+ + G
Sbjct: 84 RPHIIDNRTVEPKRAIPREQSSG 106
>gi|293336544|ref|NP_001168743.1| uncharacterized protein LOC100382538 [Zea mays]
gi|223972773|gb|ACN30574.1| unknown [Zea mays]
gi|413936749|gb|AFW71300.1| hypothetical protein ZEAMMB73_007301 [Zea mays]
gi|413936750|gb|AFW71301.1| hypothetical protein ZEAMMB73_007301 [Zea mays]
Length = 384
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/189 (33%), Positives = 99/189 (52%), Gaps = 19/189 (10%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + TEE +HF KYG I + + D +T RGF F+ F D SV D + E
Sbjct: 61 GVAWETTEESFSKHFEKYGAITDSVIMKDKHTKMPRGFGFVTFSD------PSVIDKVLE 114
Query: 166 GNHVINNKKIEAK----------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETE 215
HVI+ + +E K K K+ KIF+GGL + ++E+K HF+ +G ++E +
Sbjct: 115 DEHVIDGRTVEVKRTVPREEMNTKDGPKTRKIFIGGLPASLTEDELKDHFSLYGKVLEHQ 174
Query: 216 MPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQK-INDKEVDVKKATPKPE-PFGVRGGR 273
+ D S + + F F+TFE E V ++ + + + K+V++KKA PK + GR
Sbjct: 175 IMLDHSTGRSRGFGFVTFESEDSVERVISEGRMRDLGGKQVEIKKAEPKKHGSDNIGNGR 234
Query: 274 GGRGGRGGR 282
+GG G R
Sbjct: 235 SSQGGGGYR 243
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 49/82 (59%), Gaps = 1/82 (1%)
Query: 184 SGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLL 243
SGKIFVGG++ E +E HF ++G I ++ + DK + F F+TF SV+ +L
Sbjct: 54 SGKIFVGGVAWETTEESFSKHFEKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVIDKVL 113
Query: 244 KNPKQKINDKEVDVKKATPKPE 265
++ + I+ + V+VK+ P+ E
Sbjct: 114 ED-EHVIDGRTVEVKRTVPREE 134
Score = 46.2 bits (108), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 601 GIVDKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVE 654
G+ +TE ELK+HFS YG++ + D +TGRSRGF F+ F+ +S+E+ E
Sbjct: 150 GLPASLTEDELKDHFSLYGKVLEHQIMLDHSTGRSRGFGFVTFESEDSVERVISE 204
>gi|336379188|gb|EGO20344.1| hypothetical protein SERLADRAFT_477818 [Serpula lacrymans var.
lacrymans S7.9]
Length = 237
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 118/240 (49%), Gaps = 19/240 (7%)
Query: 33 LFCPLSSYLELDYLQLWQY-FDWVSSSFSENCLLEDSIGKPLTVSCSHHYYLFDQILRTH 91
+ P +S L L + Y D VS E +L G P S H++L
Sbjct: 1 MLHPATSLQSLYLLAITSYSLDLVSLLTLETNVLRRISGLP---SPRRHFHLMPTFATGS 57
Query: 92 FFYIMEAKNKMVSHPGIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKD 150
+ ++ V G+ T+E L+++FS++G+++ T+ DP+ GRSRGFAF+ F D
Sbjct: 58 YPTVLLDSKMFVG--GLNWDTTDEGLRKYFSEFGKVDACTIMRDPD-GRSRGFAFLTFDD 114
Query: 151 TESLEKASVEDVIAEGNHVINNKKIEAKKA-----KAKSGKIFVGGLSPEMKDEEIKAHF 205
ES+ + + H ++ K I+ K+A ++ + FVGGL+P E ++ F
Sbjct: 115 PESVNAVMIRE------HYLDGKAIDPKRAIPREEHLRNTRYFVGGLAPTTNAESMREFF 168
Query: 206 AQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE 265
+ FG +++ + D+ + K F F+TFE + + ++DK+++VK A P+ +
Sbjct: 169 SAFGKVVDATVMIDRESGRSKGFGFVTFEDSNNADQFVGKLGLMLDDKQIEVKMAQPRSQ 228
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYF 658
D E L+++FS++G+++ T+ DP+ GRSRGFAF+ F D ES+ + + Y
Sbjct: 75 DTTDEGLRKYFSEFGKVDACTIMRDPD-GRSRGFAFLTFDDPESVNAVMIREHYL 128
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 30/43 (69%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
E ++E FS +G++ + T+ D +GRS+GF F+ F+D+ + ++
Sbjct: 162 ESMREFFSAFGKVVDATVMIDRESGRSKGFGFVTFEDSNNADQ 204
>gi|147795790|emb|CAN67607.1| hypothetical protein VITISV_004303 [Vitis vinifera]
Length = 507
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 93/172 (54%), Gaps = 19/172 (11%)
Query: 107 GIVHKITEEL-KEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ ITE L +++FSKYG + ++ D GF F+ F D SL +A ++D +
Sbjct: 11 GVSGAITEGLLRDYFSKYGTVVETYIRRDSGRTPRGGFGFVTFADAASLSRA-LQD---Q 66
Query: 166 GNHVINNKKIEAKKAKAK--------------SGKIFVGGLSPEMKDEEIKAHFAQFGNI 211
H I +++E K+A K S KIFVGGLS + +EE K +F +FG I
Sbjct: 67 QQHFIQGQRVEVKRAMNKGQRNLDGSGNNNFTSKKIFVGGLSSNLTEEEFKNYFERFGRI 126
Query: 212 IETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ + +D + + + F FITFE E V +++N ++N K V+VK+A PK
Sbjct: 127 TDVVVMHDSATRRPRGFGFITFESEESVEHVMQNNFYELNGKRVEVKRAVPK 178
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+FVGG+S + + ++ +F+++G ++ET + D ++ R F F+TF + + L++
Sbjct: 6 KLFVGGVSGAITEGLLRDYFSKYGTVVETYIRRDSGRTPRGGFGFVTFADAASLSRALQD 65
Query: 246 PKQK-INDKEVDVKKATPK 263
+Q I + V+VK+A K
Sbjct: 66 QQQHFIQGQRVEVKRAMNK 84
Score = 43.5 bits (101), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVY 657
G+ +TEE K +F ++G I +V + D T R RGF FI F+ ES+E + Y
Sbjct: 106 GLSSNLTEEEFKNYFERFGRITDVVVMHDSATRRPRGFGFITFESEESVEHVMQNNFY 163
Score = 39.3 bits (90), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 32/53 (60%)
Query: 445 IIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 497
I + + +D + + + F FITFE E V +++N ++N K V+VK+A PK
Sbjct: 126 ITDVVVMHDSATRRPRGFGFITFESEESVEHVMQNNFYELNGKRVEVKRAVPK 178
>gi|380806927|gb|AFE75339.1| RNA-binding protein Musashi homolog 1, partial [Macaca mulatta]
Length = 216
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/183 (33%), Positives = 96/183 (52%), Gaps = 16/183 (8%)
Query: 125 EIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNKKIEAK------ 178
E++ + DP T RSRGF F+ F D +A V+ V+A+ H +++K I+ K
Sbjct: 1 EVKECLVMRDPLTKRSRGFGFVTFMD-----QAGVDKVLAQSRHELDSKTIDPKVAFPRR 55
Query: 179 ---KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEH 235
K ++ KIFVGGLS E++K +F QFG + + + +DK+ ++ + F F+TFE
Sbjct: 56 AQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFES 115
Query: 236 ESVVIDLLKNPKQKINDKEVDVKKATPKP--EPFGVRGGRGGRGGRGGRGGRMAGGYGGY 293
E +V + + +IN+K V+ KKA PK P G GR G + G GY
Sbjct: 116 EDIVEKVCEIHFHEINNKMVECKKAQPKEVMSPTGSARGRSRVMPYGMDAFMLGIGMLGY 175
Query: 294 GGY 296
G+
Sbjct: 176 PGF 178
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 44/75 (58%), Gaps = 5/75 (6%)
Query: 109 VHKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNH 168
V+ E++K++F ++G++++ L D T R RGF F+ F+ + +EK V H
Sbjct: 74 VNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEK-----VCEIHFH 128
Query: 169 VINNKKIEAKKAKAK 183
INNK +E KKA+ K
Sbjct: 129 EINNKMVECKKAQPK 143
Score = 42.4 bits (98), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 37/57 (64%), Gaps = 2/57 (3%)
Query: 603 VDKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFY 659
V+ E++K++F ++G++++ L D T R RGF F+ F+ + +EK V +++F+
Sbjct: 74 VNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEK--VCEIHFH 128
Score = 40.4 bits (93), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Query: 452 YDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKP--EPFGVRGGRGG 509
+DK+ ++ + F F+TFE E +V + + +IN+K V+ KKA PK P G GR
Sbjct: 98 FDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPKEVMSPTGSARGRSR 157
Query: 510 RGGRGGRGGRMAGGYGGYGGY 530
G + G GY G+
Sbjct: 158 VMPYGMDAFMLGIGMLGYPGF 178
>gi|291243889|ref|XP_002741832.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like
[Saccoglossus kowalevskii]
Length = 398
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 99/171 (57%), Gaps = 17/171 (9%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ ++ T++ LK HFS++GEI + + DPNT +SRGF FI +K + V+D +
Sbjct: 19 GLNYETTDDSLKGHFSEWGEIVDCVVMKDPNTKKSRGFGFITYK-----RASMVDDAMRS 73
Query: 166 GNHVINNKKIEAKKAKAK--SG---------KIFVGGLSPEMKDEEIKAHFAQFGNIIET 214
H I+ +++E K+A A+ SG KIFVGG+ + ++ ++ +F+++G+I
Sbjct: 74 RPHKIDGREVEPKRAVAREESGNPLAHMLVKKIFVGGIKEDTSEDHLRDYFSKYGSIESV 133
Query: 215 EMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE 265
++ DK +++ F F+TF+ V ++ IND + +VKKA PK E
Sbjct: 134 DVISDKDTGKKRGFAFVTFDDHDPVDKIVGLKYHTINDHKSEVKKAVPKQE 184
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 52/80 (65%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+F+GGL+ E D+ +K HF+++G I++ + D + + + F FIT++ S+V D +++
Sbjct: 14 KLFIGGLNYETTDDSLKGHFSEWGEIVDCVVMKDPNTKKSRGFGFITYKRASMVDDAMRS 73
Query: 246 PKQKINDKEVDVKKATPKPE 265
KI+ +EV+ K+A + E
Sbjct: 74 RPHKIDGREVEPKRAVAREE 93
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 38/51 (74%), Gaps = 1/51 (1%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
GI + +E+ L+++FSKYG IE+V + SD +TG+ RGFAF+ F D + ++K
Sbjct: 110 GIKEDTSEDHLRDYFSKYGSIESVDVISDKDTGKKRGFAFVTFDDHDPVDK 160
Score = 45.8 bits (107), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
+ LK HFS++GEI + + DPNT +SRGF FI +K ++ A
Sbjct: 27 DSLKGHFSEWGEIVDCVVMKDPNTKKSRGFGFITYKRASMVDDA 70
>gi|449533488|ref|XP_004173706.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein D-like [Cucumis sativus]
Length = 462
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 94/184 (51%), Gaps = 33/184 (17%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
GI + +E+ LK++FS YGE+ + + D T R RGF F+VF D SV D + +
Sbjct: 12 GISWETSEDKLKDYFSNYGEVMHTVVMRDKITSRPRGFGFVVFSD------PSVLDRVLQ 65
Query: 166 GNHVINNKKIEAKKAKAK--------------------------SGKIFVGGLSPEMKDE 199
H I+ K +EAK+A ++ + K FVGGL P + +E
Sbjct: 66 DKHTIDGKTVEAKRALSREEQQTPARASNSNGRNSGGSGGGNMRTKKXFVGGLPPTLTEE 125
Query: 200 EIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKK 259
K +F +G++ + + YD++ + + F FI+F+ E V +L +N K+V+VK+
Sbjct: 126 GFKEYFEAYGHVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNGKQVEVKR 185
Query: 260 ATPK 263
A PK
Sbjct: 186 ALPK 189
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GK+F+GG+S E ++++K +F+ +G ++ T + DK S+ + F F+ F SV+ +L+
Sbjct: 6 GKLFIGGISWETSEDKLKDYFSNYGEVMHTVVMRDKITSRPRGFGFVVFSDPSVLDRVLQ 65
Query: 245 NPKQKINDKEVDVKKATPKPE 265
+ K I+ K V+ K+A + E
Sbjct: 66 D-KHTIDGKTVEAKRALSREE 85
Score = 43.9 bits (102), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
G+ +TEE KE+F YG + +V + D NT R RGF FI F E++++
Sbjct: 117 GLPPTLTEEGFKEYFEAYGHVTDVVVMYDQNTRRPRGFGFISFDTEEAVDR 167
Score = 43.5 bits (101), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 28/43 (65%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
++LK++FS YGE+ + + D T R RGF F+VF D L++
Sbjct: 20 DKLKDYFSNYGEVMHTVVMRDKITSRPRGFGFVVFSDPSVLDR 62
Score = 39.7 bits (91), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 31/53 (58%)
Query: 445 IIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 497
+ + + YD++ + + F FI+F+ E V +L +N K+V+VK+A PK
Sbjct: 137 VTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNGKQVEVKRALPK 189
>gi|307940738|gb|ADN95983.1| G-strand specific single-stranded telomere-binding protein 1
[Nicotiana tabacum]
Length = 346
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/208 (33%), Positives = 109/208 (52%), Gaps = 23/208 (11%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
E+ ++F KYGEI + + D +TGR RGF FI + D V+ VIAE H+IN+K
Sbjct: 29 EQFVKYFEKYGEIIDSVIMKDRHTGRPRGFGFITYSDP-----TVVDTVIAE-THIINDK 82
Query: 174 KIEAKKA---------KAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQ 224
++E K+ K+ KIFVGG+ M ++E K F+++G +++ E+ D +
Sbjct: 83 QVEIKRTIPKGSAESKDFKTKKIFVGGIPTSMNEDEFKGFFSKYGKVVDCEIIRDHVSKR 142
Query: 225 RKNFCFITFEHESVVIDLLKNPKQ-KINDKEVDVKKATPKPEPFGVRGGRGGRGGRGGRG 283
+ F FI F++E VV ++L + +V++KKA PK G G G RG
Sbjct: 143 SRGFGFIVFDNELVVDNVLSEGNMIDMLGTQVEIKKAEPKKPSNPASSGHG--YGSESRG 200
Query: 284 GRMAGGYGGYG----GYG-GGYGGILYK 306
+ YGG+G +G GG+G Y+
Sbjct: 201 RGYSDSYGGFGNSYSSFGSGGFGPASYR 228
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 49/82 (59%), Gaps = 1/82 (1%)
Query: 182 AKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVID 241
A GKIF+GGL+ E E+ +F ++G II++ + D+ + + F FIT+ + V+D
Sbjct: 12 ASPGKIFIGGLAKETTLEQFVKYFEKYGEIIDSVIMKDRHTGRPRGFGFITYS-DPTVVD 70
Query: 242 LLKNPKQKINDKEVDVKKATPK 263
+ INDK+V++K+ PK
Sbjct: 71 TVIAETHIINDKQVEIKRTIPK 92
Score = 40.0 bits (92), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 27/47 (57%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVE 654
E+ ++F KYGEI + + D +TGR RGF FI + D ++ E
Sbjct: 29 EQFVKYFEKYGEIIDSVIMKDRHTGRPRGFGFITYSDPTVVDTVIAE 75
>gi|194906902|ref|XP_001981451.1| GG11603 [Drosophila erecta]
gi|190656089|gb|EDV53321.1| GG11603 [Drosophila erecta]
Length = 358
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 91/164 (55%), Gaps = 7/164 (4%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKAS------V 159
G+ ++ T+E LK HF K+G I +V + DP T RSRGF FI + + +++A +
Sbjct: 33 GLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFITYSHSSMIDEAQKSRPHKI 92
Query: 160 EDVIAEGNHVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYD 219
+ + E + + I++ A A K+FVG L + ++ I+ +F FGNI++ + D
Sbjct: 93 DGRVVEPKRAVPRQDIDSPNAGATVKKLFVGALKDDHDEQCIRDYFQHFGNIVDINIVMD 152
Query: 220 KSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
K +++ F F+ F+ V ++ + ++N K VDVKKA PK
Sbjct: 153 KETGKKRGFAFVEFDDYDPVDKVVLQKQHQLNGKMVDVKKALPK 196
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 49/80 (61%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+F+GGL DE +KAHF ++GNI++ + D + + F FIT+ H S++ + K+
Sbjct: 28 KLFIGGLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFITYSHSSMIDEAQKS 87
Query: 246 PKQKINDKEVDVKKATPKPE 265
KI+ + V+ K+A P+ +
Sbjct: 88 RPHKIDGRVVEPKRAVPRQD 107
Score = 46.6 bits (109), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 28/45 (62%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKAS 652
E LK HF K+G I +V + DP T RSRGF FI + + +++A
Sbjct: 41 ENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFITYSHSSMIDEAQ 85
Score = 39.3 bits (90), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 29/45 (64%)
Query: 610 LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVE 654
++++F +G I ++ + D TG+ RGFAF+ F D + ++K ++
Sbjct: 134 IRDYFQHFGNIVDINIVMDKETGKKRGFAFVEFDDYDPVDKVVLQ 178
>gi|224065561|ref|XP_002301858.1| predicted protein [Populus trichocarpa]
gi|222843584|gb|EEE81131.1| predicted protein [Populus trichocarpa]
Length = 182
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 88/165 (53%), Gaps = 14/165 (8%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
GI TE+ L++HF++YGE+ V + D TGR RGF F+VF D SV D +
Sbjct: 12 GIAWDTTEDTLRDHFNQYGEVSQVVIMRDKTTGRPRGFGFVVFSD------PSVLDPVLH 65
Query: 166 GNHVINNKKIEAKKAKAKSG-------KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPY 218
H I+ + + G KIFVGGL + ++ + +F +G++ + + Y
Sbjct: 66 DKHTIDGRTVIILPLSLLWGLSCIGTKKIFVGGLPSTVTEDGFRQYFQSYGHVNDVVVMY 125
Query: 219 DKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
D+ + + F FITF+ E V ++L+ ++N K V+VK+A PK
Sbjct: 126 DQQTQRPRGFGFITFDSEDAVDNVLQKTFHELNGKLVEVKRALPK 170
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 29/46 (63%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLE 649
D + L++HF++YGE+ V + D TGR RGF F+VF D L+
Sbjct: 16 DTTEDTLRDHFNQYGEVSQVVIMRDKTTGRPRGFGFVVFSDPSVLD 61
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 182 AKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVID 241
+ GK+FVGG++ + ++ ++ HF Q+G + + + DK+ + + F F+ F S V+D
Sbjct: 3 SDEGKLFVGGIAWDTTEDTLRDHFNQYGEVSQVVIMRDKTTGRPRGFGFVVFSDPS-VLD 61
Query: 242 LLKNPKQKINDKEV 255
+ + K I+ + V
Sbjct: 62 PVLHDKHTIDGRTV 75
Score = 39.7 bits (91), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 29/46 (63%)
Query: 452 YDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 497
YD+ + + F FITF+ E V ++L+ ++N K V+VK+A PK
Sbjct: 125 YDQQTQRPRGFGFITFDSEDAVDNVLQKTFHELNGKLVEVKRALPK 170
>gi|313225955|emb|CBY21098.1| unnamed protein product [Oikopleura dioica]
Length = 373
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 82/149 (55%), Gaps = 5/149 (3%)
Query: 110 HKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHV 169
T L+ HF ++G +++V +KSDP TG SRGF F++F+ ES V V+ G
Sbjct: 135 QTTTASLRAHFEQFGAVKDVEIKSDPTTGLSRGFGFVLFELPES-----VNAVMEAGQQF 189
Query: 170 INNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFC 229
++ K+I+ K A+ ++ K+F+GG+SP E ++ FG + E D+++ + F
Sbjct: 190 LDGKRIDPKPAEKRNCKVFIGGISPSTASETVQELMETFGQVDNFERRTDRNRGTLQPFA 249
Query: 230 FITFEHESVVIDLLKNPKQKINDKEVDVK 258
F TF+ ++V L K +I K +VK
Sbjct: 250 FCTFKDDAVASSLAKTRWVEIEGKRCEVK 278
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 42/75 (56%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+F+GG+S + ++AHF QFG + + E+ D + + F F+ FE V +++
Sbjct: 126 KMFIGGVSKQTTTASLRAHFEQFGAVKDVEIKSDPTTGLSRGFGFVLFELPESVNAVMEA 185
Query: 246 PKQKINDKEVDVKKA 260
+Q ++ K +D K A
Sbjct: 186 GQQFLDGKRIDPKPA 200
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 31/42 (73%)
Query: 607 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESL 648
T L+ HF ++G +++V +KSDP TG SRGF F++F+ ES+
Sbjct: 138 TASLRAHFEQFGAVKDVEIKSDPTTGLSRGFGFVLFELPESV 179
>gi|195503537|ref|XP_002098694.1| GE23791 [Drosophila yakuba]
gi|194184795|gb|EDW98406.1| GE23791 [Drosophila yakuba]
Length = 356
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 91/164 (55%), Gaps = 7/164 (4%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKAS------V 159
G+ ++ T+E LK HF K+G I +V + DP T RSRGF FI + + +++A +
Sbjct: 32 GLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFITYSHSSMIDEAQKSRPHKI 91
Query: 160 EDVIAEGNHVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYD 219
+ + E + + I++ A A K+FVG L + ++ I+ +F FGNI++ + D
Sbjct: 92 DGRVVEPKRAVPRQDIDSPNAGATVKKLFVGALKDDHDEQCIRDYFQHFGNIVDINIVMD 151
Query: 220 KSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
K +++ F F+ F+ V ++ + ++N K VDVKKA PK
Sbjct: 152 KETGKKRGFAFVEFDDYDPVDKVVLQKQHQLNGKMVDVKKALPK 195
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 49/80 (61%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+F+GGL DE +KAHF ++GNI++ + D + + F FIT+ H S++ + K+
Sbjct: 27 KLFIGGLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFITYSHSSMIDEAQKS 86
Query: 246 PKQKINDKEVDVKKATPKPE 265
KI+ + V+ K+A P+ +
Sbjct: 87 RPHKIDGRVVEPKRAVPRQD 106
Score = 46.6 bits (109), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 28/45 (62%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKAS 652
E LK HF K+G I +V + DP T RSRGF FI + + +++A
Sbjct: 40 ENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFITYSHSSMIDEAQ 84
Score = 39.3 bits (90), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 29/45 (64%)
Query: 610 LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVE 654
++++F +G I ++ + D TG+ RGFAF+ F D + ++K ++
Sbjct: 133 IRDYFQHFGNIVDINIVMDKETGKKRGFAFVEFDDYDPVDKVVLQ 177
>gi|326527725|dbj|BAK08137.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326528387|dbj|BAJ93382.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 453
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 93/185 (50%), Gaps = 28/185 (15%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
GI + TEE L+EHFS +GE+ + D TGR RGF F+V+ D S++ A E +
Sbjct: 12 GISWETTEEKLQEHFSNFGEVSQAAVMRDKLTGRPRGFGFVVYADPASVDAALQEPHTLD 71
Query: 166 GNHV-----INNKKIEAKKA----------------------KAKSGKIFVGGLSPEMKD 198
G V ++ ++ +A KA A++ KIFVGGL + D
Sbjct: 72 GRTVDVKRALSREEQQATKAVNPSAGRNAGGGGGGGGGGDAGGARTKKIFVGGLPSSLTD 131
Query: 199 EEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVK 258
EE + +F FG + + + YD++ + + F FITF+ E V +L + K V+VK
Sbjct: 132 EEFRQYFQTFGAVTDVVVMYDQTTQRPRGFGFITFDSEDAVDRVLHKTFHDLGGKMVEVK 191
Query: 259 KATPK 263
+A P+
Sbjct: 192 RALPR 196
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GK+F+GG+S E +E+++ HF+ FG + + + DK + + F F+ + + V L+
Sbjct: 6 GKLFIGGISWETTEEKLQEHFSNFGEVSQAAVMRDKLTGRPRGFGFVVYADPASVDAALQ 65
Query: 245 NPKQKINDKEVDVKKATPKPE 265
P ++ + VDVK+A + E
Sbjct: 66 EP-HTLDGRTVDVKRALSREE 85
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
GI + TEE L+EHFS +GE+ + D TGR RGF F+V+ D S++ A
Sbjct: 12 GISWETTEEKLQEHFSNFGEVSQAAVMRDKLTGRPRGFGFVVYADPASVDAA 63
>gi|356571134|ref|XP_003553735.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A2 homolog
2-like [Glycine max]
Length = 374
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/239 (31%), Positives = 111/239 (46%), Gaps = 52/239 (21%)
Query: 107 GIVHKIT-EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + T + +HF KYGEI + + D TG+ RGF FI + D SV D + E
Sbjct: 50 GLARETTIAQFIKHFGKYGEITDSVIMKDRKTGQPRGFGFITYAD------PSVVDTVIE 103
Query: 166 GNHVINNKKIEAKKAKAKSG-----------KIFVGGLSPEMKDEEIKAHFAQFGNIIET 214
H+IN K++E K+ + KIFVGG+ + ++E + F ++G + +
Sbjct: 104 DTHIINGKQVEIKRTIPRGAAGSNSKDFRTKKIFVGGIPSTVTEDEFRDFFTRYGEVKDH 163
Query: 215 EMPYDKSKSQRKNFCFITFEHESVVIDLLK-NPKQKINDKEVDVKKATPK----PEPFGV 269
++ D S ++ + F FIT++ E V DLL K + +V++KKA PK P P
Sbjct: 164 QIMRDHSTNRSRGFGFITYDSEEAVDDLLSVGNKIEFAGAQVEIKKAEPKKPNPPAPSSK 223
Query: 270 RGG--------------------------RGGRGGRGGRGGRMAGGYGGYGGYGGGYGG 302
R R G G GGRG AG YGG+G GGYGG
Sbjct: 224 RYNDSRSSYGGGYGDGYDGFGGNFGMGGYRSG-GAYGGRG--SAGAYGGFGSEFGGYGG 279
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 182 AKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVID 241
A GKIF+GGL+ E + HF ++G I ++ + D+ Q + F FIT+ SVV
Sbjct: 41 ASPGKIFIGGLARETTIAQFIKHFGKYGEITDSVIMKDRKTGQPRGFGFITYADPSVVDT 100
Query: 242 LLKNPKQKINDKEVDVKKATPK 263
++++ IN K+V++K+ P+
Sbjct: 101 VIED-THIINGKQVEIKRTIPR 121
Score = 42.4 bits (98), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Query: 601 GIVDKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLE 649
GI +TE E ++ F++YGE+++ + D +T RSRGF FI + E+++
Sbjct: 140 GIPSTVTEDEFRDFFTRYGEVKDHQIMRDHSTNRSRGFGFITYDSEEAVD 189
Score = 40.0 bits (92), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 609 ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVY 657
+ +HF KYGEI + + D TG+ RGF FI + D ++ +ED +
Sbjct: 59 QFIKHFGKYGEITDSVIMKDRKTGQPRGFGFITYADPSVVDTV-IEDTH 106
>gi|302850790|ref|XP_002956921.1| hypothetical protein VOLCADRAFT_107445 [Volvox carteri f.
nagariensis]
gi|300257802|gb|EFJ42046.1| hypothetical protein VOLCADRAFT_107445 [Volvox carteri f.
nagariensis]
Length = 444
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 86/166 (51%), Gaps = 22/166 (13%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
E+L+ +F +G + + + N GR RGF F+VF+ E V D + H I+ +
Sbjct: 21 EKLRAYFENFGSVREAFVSYNRNNGRPRGFGFVVFESPE------VADKVVATKHTIDRR 74
Query: 174 KIEAKKAKAK---------------SGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPY 218
++EAKKA K + KIFVGGL+P + + +++ HF+QFG + + + Y
Sbjct: 75 EVEAKKAVPKEETPEEKQQGSAPQRTKKIFVGGLAPSVDEAQLRQHFSQFGTVEDAVVMY 134
Query: 219 DKSKSQRKNFCFITFEHESVVIDLLKN-PKQKINDKEVDVKKATPK 263
D + + F F+TF E V + + Q I DK ++VK A P+
Sbjct: 135 DHENKRPRGFGFVTFAEEDAVDRVFSHGAVQTIADKPIEVKAAVPR 180
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 51/83 (61%), Gaps = 1/83 (1%)
Query: 183 KSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDL 242
+S K+F+GGLS E E+++A+F FG++ E + Y+++ + + F F+ FE V +
Sbjct: 5 QSAKVFIGGLSWETTGEKLRAYFENFGSVREAFVSYNRNNGRPRGFGFVVFESPEVADKV 64
Query: 243 LKNPKQKINDKEVDVKKATPKPE 265
+ K I+ +EV+ KKA PK E
Sbjct: 65 VAT-KHTIDRREVEAKKAVPKEE 86
Score = 40.8 bits (94), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 601 GIVDKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
G+ + E +L++HFS++G +E+ + D R RGF F+ F + +++++
Sbjct: 107 GLAPSVDEAQLRQHFSQFGTVEDAVVMYDHENKRPRGFGFVTFAEEDAVDR 157
>gi|198450175|ref|XP_002137048.1| GA26796 [Drosophila pseudoobscura pseudoobscura]
gi|198130926|gb|EDY67606.1| GA26796 [Drosophila pseudoobscura pseudoobscura]
Length = 368
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 92/164 (56%), Gaps = 7/164 (4%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKAS------V 159
G+ ++ T++ LK HF K+G+I +V + DP T RSRGF FI + + +++A +
Sbjct: 32 GLDYRTTDDNLKAHFEKWGQIVDVVVMKDPRTKRSRGFGFITYSHSTMIDEAQKARPHKI 91
Query: 160 EDVIAEGNHVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYD 219
+ + E + + I++ A A K+FVG L + ++ ++ +F FG+I++ + D
Sbjct: 92 DGRVVEPKRAVPRQDIDSPNAGATVKKLFVGALKDDHDEQSLRDYFQHFGSIVDINIVMD 151
Query: 220 KSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
K +++ F F+ F+ V ++ + ++N K VDVKKA PK
Sbjct: 152 KETGKKRGFAFVEFDDYDPVDKVVLQKQHQLNGKMVDVKKALPK 195
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 47/80 (58%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+F+GGL D+ +KAHF ++G I++ + D + + F FIT+ H +++ + K
Sbjct: 27 KLFIGGLDYRTTDDNLKAHFEKWGQIVDVVVMKDPRTKRSRGFGFITYSHSTMIDEAQKA 86
Query: 246 PKQKINDKEVDVKKATPKPE 265
KI+ + V+ K+A P+ +
Sbjct: 87 RPHKIDGRVVEPKRAVPRQD 106
Score = 45.8 bits (107), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 29/45 (64%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKAS 652
+ LK HF K+G+I +V + DP T RSRGF FI + + +++A
Sbjct: 40 DNLKAHFEKWGQIVDVVVMKDPRTKRSRGFGFITYSHSTMIDEAQ 84
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 31/51 (60%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVE 654
D + L+++F +G I ++ + D TG+ RGFAF+ F D + ++K ++
Sbjct: 127 DHDEQSLRDYFQHFGSIVDINIVMDKETGKKRGFAFVEFDDYDPVDKVVLQ 177
>gi|341889790|gb|EGT45725.1| hypothetical protein CAEBREN_10423 [Caenorhabditis brenneri]
Length = 311
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 88/160 (55%), Gaps = 14/160 (8%)
Query: 113 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINN 172
E L+++F ++GE+ + DP T R+RGF FI F D S++K V+ +H ++
Sbjct: 47 AENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSVDK-----VLHARDHELDG 101
Query: 173 KKIEAK---------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKS 223
KKI+ K K K+ K+F+GGLS E++K +F +G + + + YDK+
Sbjct: 102 KKIDPKVAFPKRTQAKLVTKTKKVFIGGLSATSTLEDMKQYFETYGKVEDAMLMYDKATQ 161
Query: 224 QRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ + F F+TF+ + V + + +IN K V+ KKA PK
Sbjct: 162 RHRGFGFVTFDSDEVADKVCEIHFHEINGKMVECKKAQPK 201
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 48/94 (51%)
Query: 170 INNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFC 229
+N + GK+F+GGLS + E ++ +F +FG + E + D + + + F
Sbjct: 19 LNADSDDGSHGSQDPGKMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFG 78
Query: 230 FITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
FITF S V +L +++ K++D K A PK
Sbjct: 79 FITFVDPSSVDKVLHARDHELDGKKIDPKVAFPK 112
Score = 45.8 bits (107), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 28/44 (63%)
Query: 607 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
E L+++F ++GE+ + DP T R+RGF FI F D S++K
Sbjct: 47 AENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSVDK 90
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 32/52 (61%), Gaps = 2/52 (3%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFY 659
E++K++F YG++E+ L D T R RGF F+ F E +K V +++F+
Sbjct: 137 EDMKQYFETYGKVEDAMLMYDKATQRHRGFGFVTFDSDEVADK--VCEIHFH 186
>gi|297805630|ref|XP_002870699.1| hypothetical protein ARALYDRAFT_493936 [Arabidopsis lyrata subsp.
lyrata]
gi|297316535|gb|EFH46958.1| hypothetical protein ARALYDRAFT_493936 [Arabidopsis lyrata subsp.
lyrata]
Length = 421
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/161 (35%), Positives = 90/161 (55%), Gaps = 16/161 (9%)
Query: 113 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINN 172
+ E +HF KYGEI + + D TG+ RGF F+ + D +SV D + + NH+I
Sbjct: 55 SAEFLKHFGKYGEITDSVIMKDRKTGQPRGFGFVTYAD------SSVVDKVIQDNHIIIG 108
Query: 173 KKIEAKKA---------KAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKS 223
K++E K+ K+ KIFVGG+ + D+E K F QFG + E ++ D S
Sbjct: 109 KQVEIKRTIPRGSMSSNDFKTKKIFVGGIPASVDDDEFKEFFMQFGELKEHQIMRDHSTG 168
Query: 224 QRKNFCFITFEHESVVIDLL-KNPKQKINDKEVDVKKATPK 263
+ + F F+T+E E +V LL K + +++ +V++KKA PK
Sbjct: 169 RSRGFGFVTYESEDMVDHLLAKGNRIELSGTQVEIKKAEPK 209
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 184 SGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLL 243
+GKIFVGGL+ E E HF ++G I ++ + D+ Q + F F+T+ SVV ++
Sbjct: 41 AGKIFVGGLARETTSAEFLKHFGKYGEITDSVIMKDRKTGQPRGFGFVTYADSSVVDKVI 100
Query: 244 KNPKQKINDKEVDVKKATPK 263
++ I K+V++K+ P+
Sbjct: 101 QD-NHIIIGKQVEIKRTIPR 119
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 27/45 (60%)
Query: 607 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
+ E +HF KYGEI + + D TG+ RGF F+ + D+ ++K
Sbjct: 55 SAEFLKHFGKYGEITDSVIMKDRKTGQPRGFGFVTYADSSVVDKV 99
>gi|390354396|ref|XP_003728322.1| PREDICTED: RNA-binding protein Musashi homolog 2-like isoform 2
[Strongylocentrotus purpuratus]
Length = 410
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 90/160 (56%), Gaps = 14/160 (8%)
Query: 113 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINN 172
T+ L+++F ++GE++ + D T RSRGF F+ F D A VE VI G H ++
Sbjct: 34 TDGLRKYFCQFGEVKECVIMRDTTTRRSRGFGFVTFSD-----PAHVETVIQRGTHEVDK 88
Query: 173 KKIEAK---------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKS 223
KK++ K K +K+ KIFVGG++ + +K F ++G + E + +D++ +
Sbjct: 89 KKVDPKVAFPKRSHPKPVSKTKKIFVGGIAASTTEPHLKKFFEKYGKVEEVTLMFDRTTN 148
Query: 224 QRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ + F F+ F++E V + + +++ K V+VKKA PK
Sbjct: 149 RHRGFGFVIFDNEKTVDSVCEEHFHELDGKLVEVKKAQPK 188
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 60/120 (50%), Gaps = 19/120 (15%)
Query: 150 DTESLEKASVEDVIAEGNHVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFG 209
D S + A+ D A+GNH GK+FVGGLS E + ++ +F QFG
Sbjct: 2 DPSSQQNATTHD--ADGNH--------------DPGKMFVGGLSWETSTDGLRKYFCQFG 45
Query: 210 NIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK---PEP 266
+ E + D + + + F F+TF + V +++ +++ K+VD K A PK P+P
Sbjct: 46 EVKECVIMRDTTTRRSRGFGFVTFSDPAHVETVIQRGTHEVDKKKVDPKVAFPKRSHPKP 105
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 49/87 (56%), Gaps = 6/87 (6%)
Query: 98 AKNKMVSHPGIVHKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 156
+K K + GI TE LK+ F KYG++E VTL D T R RGF F++F + +
Sbjct: 107 SKTKKIFVGGIAASTTEPHLKKFFEKYGKVEEVTLMFDRTTNRHRGFGFVIFDN-----E 161
Query: 157 ASVEDVIAEGNHVINNKKIEAKKAKAK 183
+V+ V E H ++ K +E KKA+ K
Sbjct: 162 KTVDSVCEEHFHELDGKLVEVKKAQPK 188
Score = 46.6 bits (109), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 40/73 (54%), Gaps = 3/73 (4%)
Query: 583 RTHYFYIVEAKNKMVSHPGIVDKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIV 641
R+H + + K V GI TE LK+ F KYG++E VTL D T R RGF F++
Sbjct: 100 RSHPKPVSKTKKIFVG--GIAASTTEPHLKKFFEKYGKVEEVTLMFDRTTNRHRGFGFVI 157
Query: 642 FKDTESLEKASVE 654
F + ++++ E
Sbjct: 158 FDNEKTVDSVCEE 170
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 27/43 (62%)
Query: 607 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLE 649
T+ L+++F ++GE++ + D T RSRGF F+ F D +E
Sbjct: 34 TDGLRKYFCQFGEVKECVIMRDTTTRRSRGFGFVTFSDPAHVE 76
>gi|336472157|gb|EGO60317.1| hypothetical protein NEUTE1DRAFT_56573, partial [Neurospora
tetrasperma FGSC 2508]
Length = 139
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 79/126 (62%), Gaps = 1/126 (0%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+ L+++FS++GE+ T+ D TGRSRGF F+ FKD +++ V++ +G +I+ K
Sbjct: 13 QSLRDYFSQFGEVVECTVMRDGATGRSRGFGFLTFKDPKTVNIVMVKEHYLDGK-IIDPK 71
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
+ + + K+ KIFVGG+S E D E + +FAQFG +++ + DK + + F F+TF
Sbjct: 72 RAIPRDEQEKTSKIFVGGVSQETTDHEFREYFAQFGRVVDATLMMDKDTGRPRGFGFVTF 131
Query: 234 EHESVV 239
E E+ V
Sbjct: 132 ESEAGV 137
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
Query: 187 IFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNP 246
+F+GGL+ E D+ ++ +F+QFG ++E + D + + + F F+TF+ V +++
Sbjct: 1 MFIGGLNWETTDQSLRDYFSQFGEVVECTVMRDGATGRSRGFGFLTFKDPKTV-NIVMVK 59
Query: 247 KQKINDKEVDVKKATPKPE 265
+ ++ K +D K+A P+ E
Sbjct: 60 EHYLDGKIIDPKRAIPRDE 78
Score = 47.0 bits (110), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 34/51 (66%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYF 658
+ L+++FS++GE+ T+ D TGRSRGF F+ FKD +++ V++ Y
Sbjct: 13 QSLRDYFSQFGEVVECTVMRDGATGRSRGFGFLTFKDPKTVNIVMVKEHYL 63
Score = 42.7 bits (99), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 107 GIVHKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLE 155
G+ + T+ E +E+F+++G + + TL D +TGR RGF F+ F+ +E
Sbjct: 89 GVSQETTDHEFREYFAQFGRVVDATLMMDKDTGRPRGFGFVTFESEAGVE 138
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 27/41 (65%)
Query: 609 ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLE 649
E +E+F+++G + + TL D +TGR RGF F+ F+ +E
Sbjct: 98 EFREYFAQFGRVVDATLMMDKDTGRPRGFGFVTFESEAGVE 138
>gi|357140379|ref|XP_003571746.1| PREDICTED: uncharacterized protein LOC100831046 isoform 1
[Brachypodium distachyon]
Length = 403
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 97/196 (49%), Gaps = 26/196 (13%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + TEE +HF KYG I + + D +T RGF F+ F D SV D + E
Sbjct: 71 GVAWETTEETFSKHFGKYGAITDSVIMKDKHTKMPRGFGFVTFSD------PSVIDKVLE 124
Query: 166 GNHVINNKKIEAK----------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETE 215
H I+ + +E K K K+ KIFVGGL + +++++ HF+ +G ++E +
Sbjct: 125 DEHNIDGRTVEVKRTVPREEMSSKDGPKTRKIFVGGLPASLSEDDLRDHFSSYGKVVEHQ 184
Query: 216 MPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQK-INDKEVDVKKATPKPEPFGVRGGRG 274
+ D S + + F F+TFE E V ++ + + + K+V++KKA PK G
Sbjct: 185 IMVDHSTGRSRGFGFVTFESEDSVERVISEGRMRDLGGKQVEIKKAEPKKH--------G 236
Query: 275 GRGGRGGRGGRMAGGY 290
G GR GGY
Sbjct: 237 GDHSSNGRSSHAGGGY 252
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 49/82 (59%), Gaps = 1/82 (1%)
Query: 184 SGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLL 243
SGKIFVGG++ E +E HF ++G I ++ + DK + F F+TF SV+ +L
Sbjct: 64 SGKIFVGGVAWETTEETFSKHFGKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVIDKVL 123
Query: 244 KNPKQKINDKEVDVKKATPKPE 265
++ + I+ + V+VK+ P+ E
Sbjct: 124 ED-EHNIDGRTVEVKRTVPREE 144
Score = 45.8 bits (107), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 32/47 (68%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVE 654
++L++HFS YG++ + D +TGRSRGF F+ F+ +S+E+ E
Sbjct: 168 DDLRDHFSSYGKVVEHQIMVDHSTGRSRGFGFVTFESEDSVERVISE 214
Score = 38.9 bits (89), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 40/82 (48%), Gaps = 9/82 (10%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQK-INDKEVDVKKATPKPEPFG 502
+++E ++ D S + + F F+TFE E V ++ + + + K+V++KKA PK
Sbjct: 179 KVVEHQIMVDHSTGRSRGFGFVTFESEDSVERVISEGRMRDLGGKQVEIKKAEPKKH--- 235
Query: 503 VRGGRGGRGGRGGRGGRMAGGY 524
GG GR GGY
Sbjct: 236 -----GGDHSSNGRSSHAGGGY 252
>gi|189241702|ref|XP_966757.2| PREDICTED: similar to hrp48.1 [Tribolium castaneum]
Length = 400
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 92/168 (54%), Gaps = 16/168 (9%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + T++ L+ FS+YGE+ + + + +GRSRGF F+ F D A+V V+
Sbjct: 21 GLSWETTQDNLQRFFSRYGEVIDCVVMKNAESGRSRGFGFVTFSD-----PANVNTVLQN 75
Query: 166 GNHVINNKKIEAKKA------KAKSG----KIFVGGLSPEMKDEEIKAHFAQFGNIIETE 215
G H ++ + I+ K K K G K+F+GGL + + +++ F +FG ++E
Sbjct: 76 GPHTLDGRTIDPKPCNPRTLQKPKKGGGYPKVFLGGLPSNVTETDLRTFFTRFGKVMEVV 135
Query: 216 MPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ YD+ K + + F F++FE E V + +N K+V++KKA P+
Sbjct: 136 IMYDQEKKKSRGFGFLSFEDEESVDRCVSEHFVNLNGKQVEIKKAEPR 183
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 43/78 (55%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+FVGGLS E + ++ F+++G +I+ + + + + F F+TF + V +L+N
Sbjct: 16 KLFVGGLSWETTQDNLQRFFSRYGEVIDCVVMKNAESGRSRGFGFVTFSDPANVNTVLQN 75
Query: 246 PKQKINDKEVDVKKATPK 263
++ + +D K P+
Sbjct: 76 GPHTLDGRTIDPKPCNPR 93
Score = 40.4 bits (93), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 27/45 (60%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESL 648
+ + L+ FS+YGE+ + + + +GRSRGF F+ F D ++
Sbjct: 25 ETTQDNLQRFFSRYGEVIDCVVMKNAESGRSRGFGFVTFSDPANV 69
Score = 40.4 bits (93), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 601 GIVDKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVE 654
G+ +TE +L+ F+++G++ V + D +SRGF F+ F+D ES+++ E
Sbjct: 111 GLPSNVTETDLRTFFTRFGKVMEVVIMYDQEKKKSRGFGFLSFEDEESVDRCVSE 165
Score = 39.3 bits (90), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 32/54 (59%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 497
+++E + YD+ K + + F F++FE E V + +N K+V++KKA P+
Sbjct: 130 KVMEVVIMYDQEKKKSRGFGFLSFEDEESVDRCVSEHFVNLNGKQVEIKKAEPR 183
>gi|389608641|dbj|BAM17930.1| heterogeneous nuclear ribonucleoprotein [Papilio xuthus]
Length = 314
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 92/164 (56%), Gaps = 7/164 (4%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA------SV 159
G+ ++ T+E LK HF K+GEI +V + D T RSRGF FI + ++ A ++
Sbjct: 24 GLNYRTTDESLKAHFEKWGEIVDVVVMKDTKTKRSRGFGFITYSKAHMVDDAQNNRPHTI 83
Query: 160 EDVIAEGNHVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYD 219
+ + E + + I+ +A A K+F+GG+ + +++++ +F+ +GN+ + D
Sbjct: 84 DSRVVETKRAVARQDIKNPEAGATVRKLFIGGIKDDHTEDQLREYFSNYGNVQNVSIVTD 143
Query: 220 KSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
K+ +++ F F+ F+ V + N KIN K++DVKKA PK
Sbjct: 144 KATGKKRGFGFVEFDDYDPVDKVCLNAPHKINGKQLDVKKALPK 187
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 44/80 (55%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
KIF+GGL+ DE +KAHF ++G I++ + D + + F FIT+ +V D N
Sbjct: 19 KIFIGGLNYRTTDESLKAHFEKWGEIVDVVVMKDTKTKRSRGFGFITYSKAHMVDDAQNN 78
Query: 246 PKQKINDKEVDVKKATPKPE 265
I+ + V+ K+A + +
Sbjct: 79 RPHTIDSRVVETKRAVARQD 98
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 37/54 (68%), Gaps = 1/54 (1%)
Query: 601 GIVDKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASV 653
GI D TE +L+E+FS YG ++NV++ +D TG+ RGF F+ F D + ++K +
Sbjct: 115 GIKDDHTEDQLREYFSNYGNVQNVSIVTDKATGKKRGFGFVEFDDYDPVDKVCL 168
Score = 43.5 bits (101), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 26/45 (57%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKAS 652
E LK HF K+GEI +V + D T RSRGF FI + ++ A
Sbjct: 32 ESLKAHFEKWGEIVDVVVMKDTKTKRSRGFGFITYSKAHMVDDAQ 76
>gi|357140381|ref|XP_003571747.1| PREDICTED: uncharacterized protein LOC100831046 isoform 2
[Brachypodium distachyon]
Length = 383
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 97/196 (49%), Gaps = 26/196 (13%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + TEE +HF KYG I + + D +T RGF F+ F D SV D + E
Sbjct: 51 GVAWETTEETFSKHFGKYGAITDSVIMKDKHTKMPRGFGFVTFSD------PSVIDKVLE 104
Query: 166 GNHVINNKKIEAK----------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETE 215
H I+ + +E K K K+ KIFVGGL + +++++ HF+ +G ++E +
Sbjct: 105 DEHNIDGRTVEVKRTVPREEMSSKDGPKTRKIFVGGLPASLSEDDLRDHFSSYGKVVEHQ 164
Query: 216 MPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQK-INDKEVDVKKATPKPEPFGVRGGRG 274
+ D S + + F F+TFE E V ++ + + + K+V++KKA PK G
Sbjct: 165 IMVDHSTGRSRGFGFVTFESEDSVERVISEGRMRDLGGKQVEIKKAEPKKH--------G 216
Query: 275 GRGGRGGRGGRMAGGY 290
G GR GGY
Sbjct: 217 GDHSSNGRSSHAGGGY 232
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
KIFVGG++ E +E HF ++G I ++ + DK + F F+TF SV+ +L++
Sbjct: 46 KIFVGGVAWETTEETFSKHFGKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVIDKVLED 105
Query: 246 PKQKINDKEVDVKKATPKPE 265
+ I+ + V+VK+ P+ E
Sbjct: 106 -EHNIDGRTVEVKRTVPREE 124
Score = 45.8 bits (107), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 32/47 (68%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVE 654
++L++HFS YG++ + D +TGRSRGF F+ F+ +S+E+ E
Sbjct: 148 DDLRDHFSSYGKVVEHQIMVDHSTGRSRGFGFVTFESEDSVERVISE 194
Score = 38.9 bits (89), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 40/82 (48%), Gaps = 9/82 (10%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQK-INDKEVDVKKATPKPEPFG 502
+++E ++ D S + + F F+TFE E V ++ + + + K+V++KKA PK
Sbjct: 159 KVVEHQIMVDHSTGRSRGFGFVTFESEDSVERVISEGRMRDLGGKQVEIKKAEPKKH--- 215
Query: 503 VRGGRGGRGGRGGRGGRMAGGY 524
GG GR GGY
Sbjct: 216 -----GGDHSSNGRSSHAGGGY 232
>gi|453084738|gb|EMF12782.1| RNA-binding domain-containing protein [Mycosphaerella populorum
SO2202]
Length = 536
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 92/150 (61%), Gaps = 2/150 (1%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+ LK++FS++GE+ T+ D TGRSRGF F+ F+D +++ V++ +G +I+ K
Sbjct: 116 QSLKDYFSQFGEVIECTVMRDGATGRSRGFGFLTFRDPKTVNTVMVKEHSLDG-KLIDPK 174
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
+ + + ++ KIFVGG+S + +++ +A F +FG +++ + DK + + F F+TF
Sbjct: 175 RAIPRDEQERTAKIFVGGVSQDATEQDFEAFFQKFGRVLDATLMMDKDTGRPRGFGFVTF 234
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKATPK 263
++E V L+ P I K ++VK+A P+
Sbjct: 235 DNEMAVERTLEGPL-AILGKPIEVKRAQPR 263
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 183 KSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDL 242
+ GK+F+GGL+ E D+ +K +F+QFG +IE + D + + + F F+TF V +
Sbjct: 100 EDGKMFIGGLNWETTDQSLKDYFSQFGEVIECTVMRDGATGRSRGFGFLTFRDPKTVNTV 159
Query: 243 LKNPKQKINDKEVDVKKATPKPE 265
+ + ++ K +D K+A P+ E
Sbjct: 160 MVK-EHSLDGKLIDPKRAIPRDE 181
Score = 46.2 bits (108), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 33/48 (68%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVED 655
+ LK++FS++GE+ T+ D TGRSRGF F+ F+D +++ V++
Sbjct: 116 QSLKDYFSQFGEVIECTVMRDGATGRSRGFGFLTFRDPKTVNTVMVKE 163
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 28/47 (59%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D ++ + F K+G + + TL D +TGR RGF F+ F + ++E+
Sbjct: 196 DATEQDFEAFFQKFGRVLDATLMMDKDTGRPRGFGFVTFDNEMAVER 242
>gi|15242719|ref|NP_198865.1| heterogeneous nuclear ribonucleoprotein A1/A3 [Arabidopsis
thaliana]
gi|9758076|dbj|BAB08520.1| unnamed protein product [Arabidopsis thaliana]
gi|22531255|gb|AAM97131.1| ribonucleoprotein-like [Arabidopsis thaliana]
gi|332007170|gb|AED94553.1| heterogeneous nuclear ribonucleoprotein A1/A3 [Arabidopsis
thaliana]
Length = 423
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/161 (35%), Positives = 90/161 (55%), Gaps = 16/161 (9%)
Query: 113 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINN 172
+ E +HF KYGEI + + D TG+ RGF F+ + D +SV D + + NH+I
Sbjct: 55 SAEFLKHFGKYGEITDSVIMKDRKTGQPRGFGFVTYAD------SSVVDKVIQDNHIIIG 108
Query: 173 KKIEAKKA---------KAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKS 223
K++E K+ K+ KIFVGG+ + D+E K F QFG + E ++ D S
Sbjct: 109 KQVEIKRTIPRGSMSSNDFKTKKIFVGGIPSSVDDDEFKEFFMQFGELKEHQIMRDHSTG 168
Query: 224 QRKNFCFITFEHESVVIDLL-KNPKQKINDKEVDVKKATPK 263
+ + F F+T+E E +V LL K + +++ +V++KKA PK
Sbjct: 169 RSRGFGFVTYESEDMVDHLLAKGNRIELSGTQVEIKKAEPK 209
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 184 SGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLL 243
+GKIFVGGL+ E E HF ++G I ++ + D+ Q + F F+T+ SVV ++
Sbjct: 41 AGKIFVGGLARETTSAEFLKHFGKYGEITDSVIMKDRKTGQPRGFGFVTYADSSVVDKVI 100
Query: 244 KNPKQKINDKEVDVKKATPK 263
++ I K+V++K+ P+
Sbjct: 101 QD-NHIIIGKQVEIKRTIPR 119
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 27/45 (60%)
Query: 607 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
+ E +HF KYGEI + + D TG+ RGF F+ + D+ ++K
Sbjct: 55 SAEFLKHFGKYGEITDSVIMKDRKTGQPRGFGFVTYADSSVVDKV 99
>gi|328779568|ref|XP_393451.4| PREDICTED: heterogeneous nuclear ribonucleoprotein 27C-like [Apis
mellifera]
Length = 442
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 107/206 (51%), Gaps = 19/206 (9%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + T+E L+ +F +YGE+ + + + +GRSRGF F+ F D A+V V+
Sbjct: 19 GLSWETTQENLQRYFGRYGEVIDCVVMKNSESGRSRGFGFVTFSD-----PANVPLVLQN 73
Query: 166 GNHVINNKKIEAK--------KAKAKSG--KIFVGGLSPEMKDEEIKAHFAQFGNIIETE 215
G H ++ + I+ K K K G K+F+GGL + + ++++ F +FG ++E
Sbjct: 74 GPHQLDGRTIDPKPCNPRTQQKPKRSGGFPKVFLGGLPSNVTETDLRSFFTRFGKVMEVV 133
Query: 216 MPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGVRGGRGG 275
+ YD+ K + + F F++FE E V + +N K+V++K+A P+ + G
Sbjct: 134 IMYDQEKKKSRGFGFLSFEDEDAVDRCVAEHFVNLNGKQVEIKRAEPRDSSSKMNDSHQG 193
Query: 276 RGGRGGRGGR---MAGGYGGYGGYGG 298
+ G +GG MAG G GG G
Sbjct: 194 QWGPPQQGGPPMGMAGNMGPMGGPNG 219
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 50/90 (55%)
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
+++ + + GK+FVGGLS E E ++ +F ++G +I+ + + + + F F+TF
Sbjct: 2 RVKTEMDDDEKGKLFVGGLSWETTQENLQRYFGRYGEVIDCVVMKNSESGRSRGFGFVTF 61
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ V +L+N +++ + +D K P+
Sbjct: 62 SDPANVPLVLQNGPHQLDGRTIDPKPCNPR 91
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 52/111 (46%), Gaps = 3/111 (2%)
Query: 427 VTGTDMMHMEVTEAVPMEIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKIND 486
VT TD+ ME++ + YD+ K + + F F++FE E V + +N
Sbjct: 114 VTETDLRSFFTRFGKVMEVV---IMYDQEKKKSRGFGFLSFEDEDAVDRCVAEHFVNLNG 170
Query: 487 KEVDVKKATPKPEPFGVRGGRGGRGGRGGRGGRMAGGYGGYGGYGGGYGEL 537
K+V++K+A P+ + G+ G +GG G G G GG G++
Sbjct: 171 KQVEIKRAEPRDSSSKMNDSHQGQWGPPQQGGPPMGMAGNMGPMGGPNGQM 221
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 26/41 (63%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESL 648
E L+ +F +YGE+ + + + +GRSRGF F+ F D ++
Sbjct: 27 ENLQRYFGRYGEVIDCVVMKNSESGRSRGFGFVTFSDPANV 67
Score = 39.3 bits (90), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 601 GIVDKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVE 654
G+ +TE +L+ F+++G++ V + D +SRGF F+ F+D +++++ E
Sbjct: 109 GLPSNVTETDLRSFFTRFGKVMEVVIMYDQEKKKSRGFGFLSFEDEDAVDRCVAE 163
>gi|340723465|ref|XP_003400110.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 27C-like [Bombus
terrestris]
Length = 443
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 107/206 (51%), Gaps = 19/206 (9%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + T+E L+ +F +YGE+ + + + +GRSRGF F+ F D A+V V+
Sbjct: 19 GLSWETTQENLQRYFGRYGEVIDCVVMKNSESGRSRGFGFVTFSD-----PANVPLVLQN 73
Query: 166 GNHVINNKKIEAK--------KAKAKSG--KIFVGGLSPEMKDEEIKAHFAQFGNIIETE 215
G H ++ + I+ K K K G K+F+GGL + + ++++ F +FG ++E
Sbjct: 74 GPHQLDGRTIDPKPCNPRTQQKPKRSGGFPKVFLGGLPSNVTETDLRSFFTRFGKVMEVV 133
Query: 216 MPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGVRGGRGG 275
+ YD+ K + + F F++FE E V + +N K+V++K+A P+ + G
Sbjct: 134 IMYDQEKKKSRGFGFLSFEDEDAVDRCVAEHFVNLNGKQVEIKRAEPRDSSSKMNDSHQG 193
Query: 276 RGGRGGRGGR---MAGGYGGYGGYGG 298
+ G +GG MAG G GG G
Sbjct: 194 QWGPPQQGGPPMGMAGNMGPMGGPNG 219
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 50/90 (55%)
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
+++ + + GK+FVGGLS E E ++ +F ++G +I+ + + + + F F+TF
Sbjct: 2 RVKTEMDDDEKGKLFVGGLSWETTQENLQRYFGRYGEVIDCVVMKNSESGRSRGFGFVTF 61
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ V +L+N +++ + +D K P+
Sbjct: 62 SDPANVPLVLQNGPHQLDGRTIDPKPCNPR 91
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 26/41 (63%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESL 648
E L+ +F +YGE+ + + + +GRSRGF F+ F D ++
Sbjct: 27 ENLQRYFGRYGEVIDCVVMKNSESGRSRGFGFVTFSDPANV 67
Score = 40.4 bits (93), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 51/110 (46%), Gaps = 3/110 (2%)
Query: 427 VTGTDMMHMEVTEAVPMEIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKIND 486
VT TD+ ME++ + YD+ K + + F F++FE E V + +N
Sbjct: 114 VTETDLRSFFTRFGKVMEVV---IMYDQEKKKSRGFGFLSFEDEDAVDRCVAEHFVNLNG 170
Query: 487 KEVDVKKATPKPEPFGVRGGRGGRGGRGGRGGRMAGGYGGYGGYGGGYGE 536
K+V++K+A P+ + G+ G +GG G G G GG G+
Sbjct: 171 KQVEIKRAEPRDSSSKMNDSHQGQWGPPQQGGPPMGMAGNMGPMGGPNGQ 220
Score = 39.3 bits (90), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 601 GIVDKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVE 654
G+ +TE +L+ F+++G++ V + D +SRGF F+ F+D +++++ E
Sbjct: 109 GLPSNVTETDLRSFFTRFGKVMEVVIMYDQEKKKSRGFGFLSFEDEDAVDRCVAE 163
>gi|390354400|ref|XP_001199490.2| PREDICTED: RNA-binding protein Musashi homolog 2-like isoform 1
[Strongylocentrotus purpuratus]
Length = 318
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 90/160 (56%), Gaps = 14/160 (8%)
Query: 113 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINN 172
T+ L+++F ++GE++ + D T RSRGF F+ F D A VE VI G H ++
Sbjct: 34 TDGLRKYFCQFGEVKECVIMRDTTTRRSRGFGFVTFSD-----PAHVETVIQRGTHEVDK 88
Query: 173 KKIEAK---------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKS 223
KK++ K K +K+ KIFVGG++ + +K F ++G + E + +D++ +
Sbjct: 89 KKVDPKVAFPKRSHPKPVSKTKKIFVGGIAASTTEPHLKKFFEKYGKVEEVTLMFDRTTN 148
Query: 224 QRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ + F F+ F++E V + + +++ K V+VKKA PK
Sbjct: 149 RHRGFGFVIFDNEKTVDSVCEEHFHELDGKLVEVKKAQPK 188
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 60/120 (50%), Gaps = 19/120 (15%)
Query: 150 DTESLEKASVEDVIAEGNHVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFG 209
D S + A+ D A+GNH GK+FVGGLS E + ++ +F QFG
Sbjct: 2 DPSSQQNATTHD--ADGNH--------------DPGKMFVGGLSWETSTDGLRKYFCQFG 45
Query: 210 NIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK---PEP 266
+ E + D + + + F F+TF + V +++ +++ K+VD K A PK P+P
Sbjct: 46 EVKECVIMRDTTTRRSRGFGFVTFSDPAHVETVIQRGTHEVDKKKVDPKVAFPKRSHPKP 105
Score = 46.6 bits (109), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 592 AKNKMVSHPGIVDKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+K K + GI TE LK+ F KYG++E VTL D T R RGF F++F + ++++
Sbjct: 107 SKTKKIFVGGIAASTTEPHLKKFFEKYGKVEEVTLMFDRTTNRHRGFGFVIFDNEKTVDS 166
Query: 651 ASVE 654
E
Sbjct: 167 VCEE 170
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 27/43 (62%)
Query: 607 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLE 649
T+ L+++F ++GE++ + D T RSRGF F+ F D +E
Sbjct: 34 TDGLRKYFCQFGEVKECVIMRDTTTRRSRGFGFVTFSDPAHVE 76
>gi|195055059|ref|XP_001994440.1| GH17116 [Drosophila grimshawi]
gi|193892203|gb|EDV91069.1| GH17116 [Drosophila grimshawi]
Length = 379
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 93/164 (56%), Gaps = 7/164 (4%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKAS------V 159
G+ ++ T++ LK HF K+G+I +V + DP T RSRGF FI + + +++A +
Sbjct: 33 GLDYRTTDDNLKAHFEKWGQIVDVVVMKDPRTKRSRGFGFITYSHSSMVDEAQKARPHKI 92
Query: 160 EDVIAEGNHVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYD 219
+ + E + ++I++ A A K+FVG L + ++ ++ +F +G+I++ + D
Sbjct: 93 DGRVVEPKRAVPRQEIDSPNAGATVKKLFVGALKDDHDEQSLRDYFQHYGSIVDINIVMD 152
Query: 220 KSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
K +++ F F+ F+ V ++ + ++N K VDVKKA PK
Sbjct: 153 KETGKKRGFAFVEFDDYDPVDKVVLQKQHQLNGKMVDVKKALPK 196
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 47/80 (58%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+F+GGL D+ +KAHF ++G I++ + D + + F FIT+ H S+V + K
Sbjct: 28 KLFIGGLDYRTTDDNLKAHFEKWGQIVDVVVMKDPRTKRSRGFGFITYSHSSMVDEAQKA 87
Query: 246 PKQKINDKEVDVKKATPKPE 265
KI+ + V+ K+A P+ E
Sbjct: 88 RPHKIDGRVVEPKRAVPRQE 107
Score = 46.2 bits (108), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 29/45 (64%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKAS 652
+ LK HF K+G+I +V + DP T RSRGF FI + + +++A
Sbjct: 41 DNLKAHFEKWGQIVDVVVMKDPRTKRSRGFGFITYSHSSMVDEAQ 85
Score = 42.4 bits (98), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 31/51 (60%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVE 654
D + L+++F YG I ++ + D TG+ RGFAF+ F D + ++K ++
Sbjct: 128 DHDEQSLRDYFQHYGSIVDINIVMDKETGKKRGFAFVEFDDYDPVDKVVLQ 178
>gi|125538654|gb|EAY85049.1| hypothetical protein OsI_06408 [Oryza sativa Indica Group]
Length = 504
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 90/166 (54%), Gaps = 15/166 (9%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + TEE +HF KYG I + + D +T RGF F+ F D SV D + E
Sbjct: 181 GVAWETTEESFSKHFEKYGAITDSVIMKDKHTKMPRGFGFVTFSD------PSVIDKVLE 234
Query: 166 GNHVINNKKIEAK-------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPY 218
HVI+ + ++ + K + KIFVGGL + ++E++ HF+ +G I+E ++
Sbjct: 235 DEHVIDGRTLKGQSQGSNVIKDGPRPRKIFVGGLPSSLTEDELREHFSPYGKIVEHQIML 294
Query: 219 DKSKSQRKNFCFITFEHESVVIDLLKNPKQK-INDKEVDVKKATPK 263
D S + + F F+TFE E V ++ + + + K+V++KKA PK
Sbjct: 295 DHSTGRSRGFGFVTFESEDSVERVISEGRMRDLGGKQVEIKKAEPK 340
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 601 GIVDKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVE 654
G+ +TE EL+EHFS YG+I + D +TGRSRGF F+ F+ +S+E+ E
Sbjct: 267 GLPSSLTEDELREHFSPYGKIVEHQIMLDHSTGRSRGFGFVTFESEDSVERVISE 321
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 37/62 (59%)
Query: 184 SGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLL 243
SGKIFVGG++ E +E HF ++G I ++ + DK + F F+TF SV+ +L
Sbjct: 174 SGKIFVGGVAWETTEESFSKHFEKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVIDKVL 233
Query: 244 KN 245
++
Sbjct: 234 ED 235
Score = 39.3 bits (90), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
G+ + TEE +HF KYG I + + D +T RGF F+ F D ++K
Sbjct: 181 GVAWETTEESFSKHFEKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVIDK 231
>gi|390354398|ref|XP_003728323.1| PREDICTED: RNA-binding protein Musashi homolog 2-like isoform 3
[Strongylocentrotus purpuratus]
Length = 366
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 90/160 (56%), Gaps = 14/160 (8%)
Query: 113 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINN 172
T+ L+++F ++GE++ + D T RSRGF F+ F D A VE VI G H ++
Sbjct: 34 TDGLRKYFCQFGEVKECVIMRDTTTRRSRGFGFVTFSD-----PAHVETVIQRGTHEVDK 88
Query: 173 KKIEAK---------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKS 223
KK++ K K +K+ KIFVGG++ + +K F ++G + E + +D++ +
Sbjct: 89 KKVDPKVAFPKRSHPKPVSKTKKIFVGGIAASTTEPHLKKFFEKYGKVEEVTLMFDRTTN 148
Query: 224 QRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ + F F+ F++E V + + +++ K V+VKKA PK
Sbjct: 149 RHRGFGFVIFDNEKTVDSVCEEHFHELDGKLVEVKKAQPK 188
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 60/120 (50%), Gaps = 19/120 (15%)
Query: 150 DTESLEKASVEDVIAEGNHVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFG 209
D S + A+ D A+GNH GK+FVGGLS E + ++ +F QFG
Sbjct: 2 DPSSQQNATTHD--ADGNH--------------DPGKMFVGGLSWETSTDGLRKYFCQFG 45
Query: 210 NIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK---PEP 266
+ E + D + + + F F+TF + V +++ +++ K+VD K A PK P+P
Sbjct: 46 EVKECVIMRDTTTRRSRGFGFVTFSDPAHVETVIQRGTHEVDKKKVDPKVAFPKRSHPKP 105
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 49/87 (56%), Gaps = 6/87 (6%)
Query: 98 AKNKMVSHPGIVHKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 156
+K K + GI TE LK+ F KYG++E VTL D T R RGF F++F + +
Sbjct: 107 SKTKKIFVGGIAASTTEPHLKKFFEKYGKVEEVTLMFDRTTNRHRGFGFVIFDN-----E 161
Query: 157 ASVEDVIAEGNHVINNKKIEAKKAKAK 183
+V+ V E H ++ K +E KKA+ K
Sbjct: 162 KTVDSVCEEHFHELDGKLVEVKKAQPK 188
Score = 46.2 bits (108), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 592 AKNKMVSHPGIVDKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+K K + GI TE LK+ F KYG++E VTL D T R RGF F++F + ++++
Sbjct: 107 SKTKKIFVGGIAASTTEPHLKKFFEKYGKVEEVTLMFDRTTNRHRGFGFVIFDNEKTVDS 166
Query: 651 ASVE 654
E
Sbjct: 167 VCEE 170
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 27/43 (62%)
Query: 607 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLE 649
T+ L+++F ++GE++ + D T RSRGF F+ F D +E
Sbjct: 34 TDGLRKYFCQFGEVKECVIMRDTTTRRSRGFGFVTFSDPAHVE 76
>gi|12847801|dbj|BAB27715.1| unnamed protein product [Mus musculus]
Length = 148
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 50/111 (45%), Positives = 73/111 (65%), Gaps = 10/111 (9%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++L E+ S++GE+ + T+K+DP TGRSRGF F++FKD ASV+ V+ H ++ K
Sbjct: 43 KDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDA-----ASVDKVLELKEHKLDGK 97
Query: 174 KIEAKKAKAKSG-----KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYD 219
I+ K+AKA G K+FVGGLSP+ +E+IK +F FG I E+P D
Sbjct: 98 LIDPKRAKALKGKEPPKKVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMD 148
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 36/48 (75%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
D ++L E+ S++GE+ + T+K+DP TGRSRGF F++FKD S++K
Sbjct: 39 DTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKV 86
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 50/87 (57%)
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
KI A K + GK+F+GGLS + +++ + ++FG +++ + D + + F F+ F
Sbjct: 18 KINASKNQQDDGKMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLF 77
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKA 260
+ + V +L+ + K++ K +D K+A
Sbjct: 78 KDAASVDKVLELKEHKLDGKLIDPKRA 104
>gi|357146558|ref|XP_003574035.1| PREDICTED: uncharacterized protein LOC100832671 [Brachypodium
distachyon]
Length = 449
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 92/182 (50%), Gaps = 25/182 (13%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
GI + TEE L EHFS +GE+ + D TGR RGF F+V+ D +++ A +E +
Sbjct: 12 GISWETTEEKLHEHFSTFGEVSQAAVMRDKLTGRPRGFGFVVYADPAAVDAALLEPHTLD 71
Query: 166 GNHV-----INNKKIEAKKA-------------------KAKSGKIFVGGLSPEMKDEEI 201
G V ++ ++ +A KA ++ KIFVGGL + D+E
Sbjct: 72 GRTVDVKRALSREEQQASKAVNPSTGRNTGGGGGGNDASGTRTKKIFVGGLPSSLTDDEF 131
Query: 202 KAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKAT 261
+ +F FG + + + YD++ + + F FITF+ E V +L + K V+VK+A
Sbjct: 132 RQYFQTFGAVTDVVVMYDQTTQRPRGFGFITFDSEDAVDRVLHKTFHDLGGKMVEVKRAL 191
Query: 262 PK 263
P+
Sbjct: 192 PR 193
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVE 654
GI + TEE L EHFS +GE+ + D TGR RGF F+V+ D +++ A +E
Sbjct: 12 GISWETTEEKLHEHFSTFGEVSQAAVMRDKLTGRPRGFGFVVYADPAAVDAALLE 66
>gi|50059467|gb|AAT02209.2| AUF1 similar protein [Paracentrotus lividus]
gi|51872093|gb|AAU12170.1| AUF1-like protein [Paracentrotus lividus]
Length = 361
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 92/157 (58%), Gaps = 10/157 (6%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
E L+++FS YG +++ +K D T + RGF FI+F+ +S+ K V+ H +++K
Sbjct: 64 ETLQQYFSAYGTVQDCEIKKDQVTKKPRGFGFILFESADSVTK-----VLDVPEHKVDDK 118
Query: 174 KIEAKKAK-----AKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNF 228
I+ K A K KIF+GG+ ++KD++IK++F+QFG ++ETE P DK+ +R F
Sbjct: 119 TIDPKPANPLKKPEKKKKIFIGGIGSDLKDDDIKSYFSQFGTVVETEFPEDKTTGRRLGF 178
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE 265
F+ +E + I++K+V+V +A + E
Sbjct: 179 AFVKYETSDEAQKAQNSRFHTISNKKVEVSEAVSREE 215
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 50/90 (55%)
Query: 173 KKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFIT 232
++I A K + K+FVGGL+ E ++ +F+ +G + + E+ D+ + + F FI
Sbjct: 38 ERIYASKEQEDDKKLFVGGLAWNTTPETLQQYFSAYGTVQDCEIKKDQVTKKPRGFGFIL 97
Query: 233 FEHESVVIDLLKNPKQKINDKEVDVKKATP 262
FE V +L P+ K++DK +D K A P
Sbjct: 98 FESADSVTKVLDVPEHKVDDKTIDPKPANP 127
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 29/43 (67%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
E L+++FS YG +++ +K D T + RGF FI+F+ +S+ K
Sbjct: 64 ETLQQYFSAYGTVQDCEIKKDQVTKKPRGFGFILFESADSVTK 106
>gi|315050188|ref|XP_003174468.1| hypothetical protein MGYG_08958 [Arthroderma gypseum CBS 118893]
gi|311339783|gb|EFQ98985.1| hypothetical protein MGYG_08958 [Arthroderma gypseum CBS 118893]
Length = 552
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 94/178 (52%), Gaps = 22/178 (12%)
Query: 107 GIVHKITEEL-KEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G + + E+ +E+FS++GE+ T+ D +GRSRGF F+ F D +++ V++ +
Sbjct: 47 GFISSVAEKRSREYFSQFGEVHECTVMRDGASGRSRGFGFLTFTDPKTVNTVMVKEHYLD 106
Query: 166 GNHV--------------------INNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHF 205
G V I+ K+ + + ++ KIFVGG+S E ++E K F
Sbjct: 107 GKIVWLAPSISGPLLGYFADREYKIDPKRAIPRDEQERTSKIFVGGVSQEATEQEFKQFF 166
Query: 206 AQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
QFG +++ + DK + + F F+TF+ E+ V L P + I+ K ++VKKA P+
Sbjct: 167 MQFGRVVDATLMIDKDTGRPRGFGFVTFDSEAAVEATLSVPLE-IHGKAIEVKKAQPR 223
Score = 47.4 bits (111), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 46/91 (50%), Gaps = 9/91 (9%)
Query: 577 LFDQNLRTHYFYI------VEAKNKMVSHP--GIVDKITEEL-KEHFSKYGEIENVTLKS 627
L D ++ F I V K SH G + + E+ +E+FS++GE+ T+
Sbjct: 15 LHDPDMAAARFTIWTFMERVPGVKKGASHNSMGFISSVAEKRSREYFSQFGEVHECTVMR 74
Query: 628 DPNTGRSRGFAFIVFKDTESLEKASVEDVYF 658
D +GRSRGF F+ F D +++ V++ Y
Sbjct: 75 DGASGRSRGFGFLTFTDPKTVNTVMVKEHYL 105
Score = 42.7 bits (99), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 35/54 (64%), Gaps = 2/54 (3%)
Query: 601 GIVDKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASV 653
G+ + TE E K+ F ++G + + TL D +TGR RGF F+ F D+E+ +A++
Sbjct: 152 GVSQEATEQEFKQFFMQFGRVVDATLMIDKDTGRPRGFGFVTF-DSEAAVEATL 204
>gi|350406107|ref|XP_003487656.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 27C-like [Bombus
impatiens]
Length = 426
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 107/206 (51%), Gaps = 19/206 (9%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + T+E L+ +F +YGE+ + + + +GRSRGF F+ F D A+V V+
Sbjct: 19 GLSWETTQENLQRYFGRYGEVIDCVVMKNSESGRSRGFGFVTFSD-----PANVPLVLQN 73
Query: 166 GNHVINNKKIEAK--------KAKAKSG--KIFVGGLSPEMKDEEIKAHFAQFGNIIETE 215
G H ++ + I+ K K K G K+F+GGL + + ++++ F +FG ++E
Sbjct: 74 GPHQLDGRTIDPKPCNPRTQQKPKRSGGFPKVFLGGLPSNVTETDLRSFFTRFGKVMEVV 133
Query: 216 MPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGVRGGRGG 275
+ YD+ K + + F F++FE E V + +N K+V++K+A P+ + G
Sbjct: 134 IMYDQEKKKSRGFGFLSFEDEDAVDRCVAEHFVNLNGKQVEIKRAEPRDSSSKMNDSHQG 193
Query: 276 RGGRGGRGGR---MAGGYGGYGGYGG 298
+ G +GG MAG G GG G
Sbjct: 194 QWGPPQQGGPPMGMAGNMGPMGGPNG 219
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 50/90 (55%)
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
+++ + + GK+FVGGLS E E ++ +F ++G +I+ + + + + F F+TF
Sbjct: 2 RVKTEMDDDEKGKLFVGGLSWETTQENLQRYFGRYGEVIDCVVMKNSESGRSRGFGFVTF 61
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ V +L+N +++ + +D K P+
Sbjct: 62 SDPANVPLVLQNGPHQLDGRTIDPKPCNPR 91
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 26/41 (63%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESL 648
E L+ +F +YGE+ + + + +GRSRGF F+ F D ++
Sbjct: 27 ENLQRYFGRYGEVIDCVVMKNSESGRSRGFGFVTFSDPANV 67
Score = 40.0 bits (92), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 51/110 (46%), Gaps = 3/110 (2%)
Query: 427 VTGTDMMHMEVTEAVPMEIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKIND 486
VT TD+ ME++ + YD+ K + + F F++FE E V + +N
Sbjct: 114 VTETDLRSFFTRFGKVMEVV---IMYDQEKKKSRGFGFLSFEDEDAVDRCVAEHFVNLNG 170
Query: 487 KEVDVKKATPKPEPFGVRGGRGGRGGRGGRGGRMAGGYGGYGGYGGGYGE 536
K+V++K+A P+ + G+ G +GG G G G GG G+
Sbjct: 171 KQVEIKRAEPRDSSSKMNDSHQGQWGPPQQGGPPMGMAGNMGPMGGPNGQ 220
Score = 39.3 bits (90), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 601 GIVDKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVE 654
G+ +TE +L+ F+++G++ V + D +SRGF F+ F+D +++++ E
Sbjct: 109 GLPSNVTETDLRSFFTRFGKVMEVVIMYDQEKKKSRGFGFLSFEDEDAVDRCVAE 163
>gi|328779378|ref|XP_003249642.1| PREDICTED: RNA-binding protein Musashi homolog Rbp6-like, partial
[Apis mellifera]
Length = 212
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 54/135 (40%), Positives = 79/135 (58%), Gaps = 13/135 (9%)
Query: 113 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINN 172
+E+L+E+F +G + +V + DP T RSRGF FI F E SV+ V+ H ++
Sbjct: 74 SEKLREYFGMFGTVTDVLIMKDPVTQRSRGFGFITFA-----EPGSVDKVLKCPIHTLDG 128
Query: 173 KKIEAKKAKAK--------SGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQ 224
KKI+ K A K + KIFVGG+S + +E+KA+F QFG + ET M D+ +
Sbjct: 129 KKIDPKHATPKNRAKQANRTKKIFVGGVSQDTSSDEVKAYFNQFGKVEETVMLMDQQTKR 188
Query: 225 RKNFCFITFEHESVV 239
+ F F+TFE+E VV
Sbjct: 189 HRGFGFVTFENEDVV 203
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 45/79 (56%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GK+FVGGLS + E+++ +F FG + + + D + + F FITF V +LK
Sbjct: 61 GKLFVGGLSWQTSSEKLREYFGMFGTVTDVLIMKDPVTQRSRGFGFITFAEPGSVDKVLK 120
Query: 245 NPKQKINDKEVDVKKATPK 263
P ++ K++D K ATPK
Sbjct: 121 CPIHTLDGKKIDPKHATPK 139
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 30/44 (68%)
Query: 607 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+E+L+E+F +G + +V + DP T RSRGF FI F + S++K
Sbjct: 74 SEKLREYFGMFGTVTDVLIMKDPVTQRSRGFGFITFAEPGSVDK 117
Score = 40.4 bits (93), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFY 659
D ++E+K +F+++G++E + D T R RGF F+ F++ + +++ V +++F+
Sbjct: 159 DTSSDEVKAYFNQFGKVEETVMLMDQQTKRHRGFGFVTFENEDVVDR--VCEIHFH 212
>gi|326531676|dbj|BAJ97842.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 413
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 91/169 (53%), Gaps = 18/169 (10%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + TEE +HF KYG I + + D +T RGF F+ F D SV D + E
Sbjct: 68 GVAWETTEESFSKHFGKYGAITDSVIMKDKHTKMPRGFGFVTFSD------PSVIDKVLE 121
Query: 166 GNHVINNKKIEAK----------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETE 215
H I+ + +E K K K+ KIFVGGL + +++++ HF+ +GN++E +
Sbjct: 122 DEHNIDGRTVEVKRTVPREEMSSKDGPKTRKIFVGGLPSTLTEDDLRDHFSSYGNVVEHQ 181
Query: 216 MPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQK-INDKEVDVKKATPK 263
+ D S + + F F+TFE E V ++ + + + K+V++KKA PK
Sbjct: 182 IMVDHSTGRSRGFGFVTFESEDSVERVISEGRMRDLGGKQVEIKKAEPK 230
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 49/82 (59%), Gaps = 1/82 (1%)
Query: 184 SGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLL 243
SGKIFVGG++ E +E HF ++G I ++ + DK + F F+TF SV+ +L
Sbjct: 61 SGKIFVGGVAWETTEESFSKHFGKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVIDKVL 120
Query: 244 KNPKQKINDKEVDVKKATPKPE 265
++ + I+ + V+VK+ P+ E
Sbjct: 121 ED-EHNIDGRTVEVKRTVPREE 141
Score = 45.8 bits (107), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVE 654
G+ +TE+ L++HFS YG + + D +TGRSRGF F+ F+ +S+E+ E
Sbjct: 157 GLPSTLTEDDLRDHFSSYGNVVEHQIMVDHSTGRSRGFGFVTFESEDSVERVISE 211
>gi|326487243|dbj|BAJ89606.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326506666|dbj|BAJ91374.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 413
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 91/169 (53%), Gaps = 18/169 (10%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + TEE +HF KYG I + + D +T RGF F+ F D SV D + E
Sbjct: 68 GVAWETTEESFSKHFGKYGAITDSVIMKDKHTKMPRGFGFVTFSD------PSVIDKVLE 121
Query: 166 GNHVINNKKIEAK----------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETE 215
H I+ + +E K K K+ KIFVGGL + +++++ HF+ +GN++E +
Sbjct: 122 DEHNIDGRTVEVKRTVPREEMSSKDGPKTRKIFVGGLPSTLTEDDLRDHFSSYGNVVEHQ 181
Query: 216 MPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQK-INDKEVDVKKATPK 263
+ D S + + F F+TFE E V ++ + + + K+V++KKA PK
Sbjct: 182 IMVDHSTGRSRGFGFVTFESEDSVERVISEGRMRDLGGKQVEIKKAEPK 230
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 49/82 (59%), Gaps = 1/82 (1%)
Query: 184 SGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLL 243
SGKIFVGG++ E +E HF ++G I ++ + DK + F F+TF SV+ +L
Sbjct: 61 SGKIFVGGVAWETTEESFSKHFGKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVIDKVL 120
Query: 244 KNPKQKINDKEVDVKKATPKPE 265
++ + I+ + V+VK+ P+ E
Sbjct: 121 ED-EHNIDGRTVEVKRTVPREE 141
Score = 45.8 bits (107), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVE 654
G+ +TE+ L++HFS YG + + D +TGRSRGF F+ F+ +S+E+ E
Sbjct: 157 GLPSTLTEDDLRDHFSSYGNVVEHQIMVDHSTGRSRGFGFVTFESEDSVERVISE 211
>gi|452981460|gb|EME81220.1| hypothetical protein MYCFIDRAFT_211785, partial [Pseudocercospora
fijiensis CIRAD86]
Length = 353
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 52/150 (34%), Positives = 89/150 (59%), Gaps = 2/150 (1%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
E LK++FS++GE+ T+ D TGRSRGF F+ FKD +++ V++ +G +I+ K
Sbjct: 117 ESLKQYFSQFGEVVECTVMRDGATGRSRGFGFLTFKDPKNVNTVMVKEHSLDG-KLIDPK 175
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
+ + + ++ KIFVGG+S E + + K F +FG +++ + DK + + F F+TF
Sbjct: 176 RAIPRDEQERTAKIFVGGVSQEATEADFKDFFMKFGRVLDATLMMDKDTGRPRGFGFVTF 235
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ E V L+ P I K ++VK+A P+
Sbjct: 236 DSELAVERTLEGPL-AILGKPIEVKRAQPR 264
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 50/83 (60%), Gaps = 1/83 (1%)
Query: 183 KSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDL 242
+ GK+F+GGL+ E DE +K +F+QFG ++E + D + + + F F+TF+ V +
Sbjct: 101 EDGKMFIGGLNWETTDESLKQYFSQFGEVVECTVMRDGATGRSRGFGFLTFKDPKNVNTV 160
Query: 243 LKNPKQKINDKEVDVKKATPKPE 265
+ + ++ K +D K+A P+ E
Sbjct: 161 MVK-EHSLDGKLIDPKRAIPRDE 182
Score = 47.8 bits (112), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 33/48 (68%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVED 655
E LK++FS++GE+ T+ D TGRSRGF F+ FKD +++ V++
Sbjct: 117 ESLKQYFSQFGEVVECTVMRDGATGRSRGFGFLTFKDPKNVNTVMVKE 164
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Query: 601 GIVDKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
G+ + TE + K+ F K+G + + TL D +TGR RGF F+ F ++E+
Sbjct: 193 GVSQEATEADFKDFFMKFGRVLDATLMMDKDTGRPRGFGFVTFDSELAVER 243
>gi|242004925|ref|XP_002423326.1| Nuclear polyadenylated RNA-binding protein, putative [Pediculus
humanus corporis]
gi|212506345|gb|EEB10588.1| Nuclear polyadenylated RNA-binding protein, putative [Pediculus
humanus corporis]
Length = 286
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 92/166 (55%), Gaps = 25/166 (15%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ +K T+E LK HF K+GE+ +V + DP T RSRGF FI + + V+D A
Sbjct: 42 GLDYKTTDETLKSHFEKWGEVVDVVVMKDPKTKRSRGFGFITY-----AKAHMVDDAQAN 96
Query: 166 GNHVINNKKIEAKKA--KAKSG---------KIFVGGLSPEMKDEEIKAHFAQFGNIIET 214
H ++N+ +E K+A + +SG K+F+GG+ E ++E++K HF QFGNI+
Sbjct: 97 RPHKVDNRTVEPKRAVPRTESGRPDAGASIKKLFIGGIKDEHEEEDLKEHFKQFGNIVSC 156
Query: 215 EMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKA 260
+ DK ++K F F+ ++ +P K K +DVKKA
Sbjct: 157 SIVVDKDSGKKKGFAFVEYDD--------YDPVDKACCKHLDVKKA 194
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 47/80 (58%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+F+GGL + DE +K+HF ++G +++ + D + + F FIT+ +V D N
Sbjct: 37 KLFIGGLDYKTTDETLKSHFEKWGEVVDVVVMKDPKTKRSRGFGFITYAKAHMVDDAQAN 96
Query: 246 PKQKINDKEVDVKKATPKPE 265
K++++ V+ K+A P+ E
Sbjct: 97 RPHKVDNRTVEPKRAVPRTE 116
Score = 46.2 bits (108), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 27/46 (58%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASV 653
E LK HF K+GE+ +V + DP T RSRGF FI + ++ A
Sbjct: 50 ETLKSHFEKWGEVVDVVVMKDPKTKRSRGFGFITYAKAHMVDDAQA 95
Score = 43.9 bits (102), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 36/52 (69%), Gaps = 1/52 (1%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
GI D+ EE LKEHF ++G I + ++ D ++G+ +GFAF+ + D + ++KA
Sbjct: 133 GIKDEHEEEDLKEHFKQFGNIVSCSIVVDKDSGKKKGFAFVEYDDYDPVDKA 184
>gi|339233086|ref|XP_003381660.1| heterogeneous nuclear ribonucleoprotein A1 [Trichinella spiralis]
gi|316979494|gb|EFV62286.1| heterogeneous nuclear ribonucleoprotein A1 [Trichinella spiralis]
Length = 322
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 118/250 (47%), Gaps = 50/250 (20%)
Query: 92 FFYIMEAKNKMVSHPGI-VHKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKD 150
F + +N+ + GI V+ E+L+ +SK+GEI +V + DP + RSRGF F+ + D
Sbjct: 18 FLPEKDEQNRKIFIGGITVNTSDEDLRTFYSKWGEITDVVVMRDPVSKRSRGFGFVTYAD 77
Query: 151 TESLEKASVEDVIAEGNHVINNKKIEAKKAKAKS-----------GKIFVGGLSPEMKDE 199
E + A +A H+I+ K++E K+A K K+++ G+ E ++
Sbjct: 78 PEQVNAA-----MAARPHLIDGKEVEPKRAMPKDVMNKPEAHISVKKVYISGIKDEHTED 132
Query: 200 EIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKK 259
++ +F Q+G++ E ++ D+ +++ F F+TF+ V ++ I++K DVKK
Sbjct: 133 MLREYFMQYGSVQEVDIKVDQGTGKKRGFAFVTFDDYDPVDRVVLEKSHMIDNKRCDVKK 192
Query: 260 ATPKPEPFGV------------------RGG-------------RGGRGGR--GGRGGRM 286
A K E + RGG GG R GG GG M
Sbjct: 193 ALSKEEMKRIQQQDFDRQQRDARSRGMMRGGYTPNRSMGDMGMPYGGASSRWSGGHGGNM 252
Query: 287 AGGYGGYGGY 296
AG +GG+ +
Sbjct: 253 AGNHGGWADH 262
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 595 KMVSHPGIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASV 653
K V GI D+ TE+ L+E+F +YG ++ V +K D TG+ RGFAF+ F D + +++ +
Sbjct: 118 KKVYISGIKDEHTEDMLREYFMQYGSVQEVDIKVDQGTGKKRGFAFVTFDDYDPVDRVVL 177
Query: 654 EDVYFYSN 661
E + N
Sbjct: 178 EKSHMIDN 185
Score = 47.0 bits (110), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 591 EAKNKMVSHPGI-VDKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLE 649
+ +N+ + GI V+ E+L+ +SK+GEI +V + DP + RSRGF F+ + D E +
Sbjct: 23 DEQNRKIFIGGITVNTSDEDLRTFYSKWGEITDVVVMRDPVSKRSRGFGFVTYADPEQVN 82
Query: 650 KA 651
A
Sbjct: 83 AA 84
>gi|194741288|ref|XP_001953121.1| GF17369 [Drosophila ananassae]
gi|190626180|gb|EDV41704.1| GF17369 [Drosophila ananassae]
Length = 419
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 85/174 (48%), Gaps = 26/174 (14%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
E ++E F ++G + + + DP T SRGF F+ + D S VE+V G H I+NK
Sbjct: 62 ETVREFFRQFGAVADAVVMRDPMTNHSRGFGFVTYVDGNS-----VENVQRAGPHSIDNK 116
Query: 174 KIEAKKA---------------------KAKSGKIFVGGLSPEMKDEEIKAHFAQFGNII 212
+E K+A KS KIF+GGL + I+ +F+QFG I
Sbjct: 117 TVETKRALPRHEFLKPGGGAGNSIGAMTGVKSNKIFLGGLKDCHDESSIREYFSQFGGIT 176
Query: 213 ETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEP 266
++ DK +++ F F+ FE + L K IN V+VKK+T KP+P
Sbjct: 177 SVKLLLDKDTGRKRGFGFLEFEDSASADQALAQGKHTINMTTVEVKKSTQKPDP 230
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 47/89 (52%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
KIF+GGLS + E ++ F QFG + + + D + + F F+T+ + V ++ +
Sbjct: 49 KIFIGGLSTQTTVETVREFFRQFGAVADAVVMRDPMTNHSRGFGFVTYVDGNSVENVQRA 108
Query: 246 PKQKINDKEVDVKKATPKPEPFGVRGGRG 274
I++K V+ K+A P+ E GG G
Sbjct: 109 GPHSIDNKTVETKRALPRHEFLKPGGGAG 137
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 31/42 (73%)
Query: 610 LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
++E+FS++G I +V L D +TGR RGF F+ F+D+ S ++A
Sbjct: 165 IREYFSQFGGITSVKLLLDKDTGRKRGFGFLEFEDSASADQA 206
>gi|168067843|ref|XP_001785814.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162662538|gb|EDQ49378.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 382
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 97/195 (49%), Gaps = 20/195 (10%)
Query: 113 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINN 172
TE L+++ K+GE+++V + D TGRSRGF ++ F E +KA H +N
Sbjct: 10 TEGLRQYMLKFGELDDVIVMKDRGTGRSRGFGYVTFAAVEDAKKA------VSTQHSLNG 63
Query: 173 KKIEAKKAKAKS---------GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKS 223
+ +E K A K ++FV + P + DE +++F ++G + + MP D+
Sbjct: 64 RMLEVKVATPKEEMKPPAKKITRVFVARIPPSVTDEAFRSYFEKYGTLTDAYMPKDQGSK 123
Query: 224 QRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGVRG-GRGGRGGRGGR 282
+ F+TFE+ V D L N ++ + V +ATPK + GV+ GRG GG
Sbjct: 124 AHRGIGFVTFENPESV-DNLMNETHELGGSTIAVDRATPKED--GVKTWGRGFHGGNQNS 180
Query: 283 GGRM-AGGYGGYGGY 296
+G YG YG Y
Sbjct: 181 ASNAGSGAYGAYGVY 195
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDL-LK 244
KIFVG L PE E+++ +F FG I + +P D K+ + F F+TF E + L+
Sbjct: 232 KIFVGRLPPEANAEDLRRYFNNFGRISDVYVPKDAKKTSHRGFGFVTFSDEGAAERVALR 291
Query: 245 NPKQKINDKEVDVKKATPKPE 265
N +I ++ V +A P+ E
Sbjct: 292 N--HEILGHQIAVDRAAPQDE 310
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 84/215 (39%), Gaps = 37/215 (17%)
Query: 445 IIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGVR 504
+ + MP D+ + F+TFE+ V D L N ++ + V +ATPK + GV+
Sbjct: 111 LTDAYMPKDQGSKAHRGIGFVTFENPESV-DNLMNETHELGGSTIAVDRATPKED--GVK 167
Query: 505 G-GRGGRGGRGGRGGRM-AGGYGGYGGYGGGYGELDYLQLWQFFDWISSSFSENCLLEDS 562
GRG GG +G YG YG Y + +D+ S F +
Sbjct: 168 TWGRGFHGGNQNSASNAGSGAYGAYGVYTNAARFGGLGGGFGAYDYSGSGFGSPPI---- 223
Query: 563 IGKPLTVSCSHYHYLFDQNLRTHYFY--IVEAKNKMVSHPGIVDKITEELKEHFSKYGEI 620
PL + L T F + N E+L+ +F+ +G I
Sbjct: 224 --PPL------------RGLGTKIFVGRLPPEAN------------AEDLRRYFNNFGRI 257
Query: 621 ENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVED 655
+V + D RGF F+ F D + E+ ++ +
Sbjct: 258 SDVYVPKDAKKTSHRGFGFVTFSDEGAAERVALRN 292
Score = 45.4 bits (106), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 31/48 (64%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
D TE L+++ K+GE+++V + D TGRSRGF ++ F E +KA
Sbjct: 7 DIDTEGLRQYMLKFGELDDVIVMKDRGTGRSRGFGYVTFAAVEDAKKA 54
>gi|195391065|ref|XP_002054186.1| GJ22934 [Drosophila virilis]
gi|194152272|gb|EDW67706.1| GJ22934 [Drosophila virilis]
Length = 355
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 92/164 (56%), Gaps = 7/164 (4%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKAS------V 159
G+ ++ T++ LK HF K+G+I +V + DP T RSRGF FI + + +++A +
Sbjct: 33 GLDYRTTDDNLKAHFEKWGQIVDVVVMKDPRTKRSRGFGFITYSHSSMVDEAQKARPHKI 92
Query: 160 EDVIAEGNHVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYD 219
+ + E + + I++ A A K+FVG L + ++ ++ +F +G+I++ + D
Sbjct: 93 DGRVVEPKRAVPRQDIDSPNAGATVKKLFVGALKDDHDEQSLRDYFQHYGSIVDINIVMD 152
Query: 220 KSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
K +++ F F+ F+ V ++ + ++N K VDVKKA PK
Sbjct: 153 KETGKKRGFAFVEFDDYDPVDKVVLQKQHQLNGKMVDVKKALPK 196
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 47/80 (58%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+F+GGL D+ +KAHF ++G I++ + D + + F FIT+ H S+V + K
Sbjct: 28 KLFIGGLDYRTTDDNLKAHFEKWGQIVDVVVMKDPRTKRSRGFGFITYSHSSMVDEAQKA 87
Query: 246 PKQKINDKEVDVKKATPKPE 265
KI+ + V+ K+A P+ +
Sbjct: 88 RPHKIDGRVVEPKRAVPRQD 107
Score = 46.2 bits (108), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 29/45 (64%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKAS 652
+ LK HF K+G+I +V + DP T RSRGF FI + + +++A
Sbjct: 41 DNLKAHFEKWGQIVDVVVMKDPRTKRSRGFGFITYSHSSMVDEAQ 85
Score = 42.4 bits (98), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 31/51 (60%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVE 654
D + L+++F YG I ++ + D TG+ RGFAF+ F D + ++K ++
Sbjct: 128 DHDEQSLRDYFQHYGSIVDINIVMDKETGKKRGFAFVEFDDYDPVDKVVLQ 178
>gi|449446702|ref|XP_004141110.1| PREDICTED: LOW QUALITY PROTEIN: nuclear pore membrane glycoprotein
210-like [Cucumis sativus]
Length = 2257
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 85/158 (53%), Gaps = 16/158 (10%)
Query: 113 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINN 172
+ + +HF YGEI + + D TG RGF F+ + D SV D + E H+IN
Sbjct: 1934 SAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYAD------PSVVDKVIEDTHIING 1987
Query: 173 KKIEAKKAKAK---------SGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKS 223
K++E K+ K + KIFVGG+ + ++E + F Q+G + E ++ D S S
Sbjct: 1988 KQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGVVKEHQIMRDHSTS 2047
Query: 224 QRKNFCFITFEHESVVIDLLKN-PKQKINDKEVDVKKA 260
+ + F FITFE E V DLL N + ++ +V++KKA
Sbjct: 2048 RSRGFGFITFETEQAVDDLLANGNRLEMAGSQVEIKKA 2085
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
KIFVGGL E + HF +G I ++ + D+ + F F+T+ SVV ++++
Sbjct: 1922 KIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIED 1981
Query: 246 PKQKINDKEVDVKKATPK 263
IN K+V++K+ PK
Sbjct: 1982 -THIINGKQVEIKRTIPK 1998
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 48/85 (56%), Gaps = 7/85 (8%)
Query: 99 KNKMVSHPGIVHKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 157
K K + GI + E E ++ F +YG ++ + D +T RSRGF FI F+ +
Sbjct: 2007 KTKKIFVGGIPTSVDEDEFRDFFMQYGVVKEHQIMRDHSTSRSRGFGFITFETEQ----- 2061
Query: 158 SVEDVIAEGNHV-INNKKIEAKKAK 181
+V+D++A GN + + ++E KKA+
Sbjct: 2062 AVDDLLANGNRLEMAGSQVEIKKAE 2086
Score = 39.7 bits (91), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 607 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYF 658
+ + +HF YGEI + + D TG RGF F+ + D ++K +ED +
Sbjct: 1934 SAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKV-IEDTHI 1984
>gi|194745154|ref|XP_001955057.1| GF18582 [Drosophila ananassae]
gi|190628094|gb|EDV43618.1| GF18582 [Drosophila ananassae]
Length = 357
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 90/164 (54%), Gaps = 7/164 (4%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKAS------V 159
G+ ++ T+E LK HF K+G I +V + DP T RSRGF FI + + +++A +
Sbjct: 32 GLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFITYSHSSMIDEAQKSRPHKI 91
Query: 160 EDVIAEGNHVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYD 219
+ + E + + I++ A A K+FVG L + ++ ++ +F FGNI++ + D
Sbjct: 92 DGRVVEPKRAVPRQDIDSPNAGATVKKLFVGALKDDHDEQSLRDYFQNFGNIVDINIVMD 151
Query: 220 KSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
K +++ F F+ F+ V ++ + ++ K VDVKKA PK
Sbjct: 152 KETGKKRGFAFVEFDDYDPVDKVVLQKQHQLKGKMVDVKKALPK 195
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 49/80 (61%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+F+GGL DE +KAHF ++GNI++ + D + + F FIT+ H S++ + K+
Sbjct: 27 KLFIGGLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFITYSHSSMIDEAQKS 86
Query: 246 PKQKINDKEVDVKKATPKPE 265
KI+ + V+ K+A P+ +
Sbjct: 87 RPHKIDGRVVEPKRAVPRQD 106
Score = 46.2 bits (108), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 28/44 (63%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
E LK HF K+G I +V + DP T RSRGF FI + + +++A
Sbjct: 40 ENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFITYSHSSMIDEA 83
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 31/51 (60%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVE 654
D + L+++F +G I ++ + D TG+ RGFAF+ F D + ++K ++
Sbjct: 127 DHDEQSLRDYFQNFGNIVDINIVMDKETGKKRGFAFVEFDDYDPVDKVVLQ 177
>gi|125555768|gb|EAZ01374.1| hypothetical protein OsI_23407 [Oryza sativa Indica Group]
Length = 407
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 90/169 (53%), Gaps = 18/169 (10%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + TEE +HF KYG I + + D +T RGF F+ F D SV D + +
Sbjct: 97 GVAWETTEESFTKHFEKYGAISDSVIMKDKHTKMPRGFGFVTFSD------PSVIDKVLQ 150
Query: 166 GNHVINNKKIEAK----------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETE 215
H I+ + +E K K K+ KIFVGG+ P + ++++K HF+ +G ++E +
Sbjct: 151 DEHTIDGRTVEVKRTVPREEMSSKDGPKTRKIFVGGIPPSLTEDKLKEHFSSYGKVVEHQ 210
Query: 216 MPYDKSKSQRKNFCFITFEHESVVIDLLKNPK-QKINDKEVDVKKATPK 263
+ D + + F F+TFE+E V ++ + + K+V++KKA PK
Sbjct: 211 IMLDHGTGRSRGFGFVTFENEDAVERVMSEGRMHDLAGKQVEIKKAEPK 259
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
KIFVGG++ E +E HF ++G I ++ + DK + F F+TF SV+ +L++
Sbjct: 92 KIFVGGVAWETTEESFTKHFEKYGAISDSVIMKDKHTKMPRGFGFVTFSDPSVIDKVLQD 151
Query: 246 PKQKINDKEVDVKKATPKPE 265
+ I+ + V+VK+ P+ E
Sbjct: 152 -EHTIDGRTVEVKRTVPREE 170
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVE 654
GI +TE+ LKEHFS YG++ + D TGRSRGF F+ F++ +++E+ E
Sbjct: 186 GIPPSLTEDKLKEHFSSYGKVVEHQIMLDHGTGRSRGFGFVTFENEDAVERVMSE 240
Score = 38.9 bits (89), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
G+ + TEE +HF KYG I + + D +T RGF F+ F D ++K
Sbjct: 97 GVAWETTEESFTKHFEKYGAISDSVIMKDKHTKMPRGFGFVTFSDPSVIDK 147
>gi|125597614|gb|EAZ37394.1| hypothetical protein OsJ_21732 [Oryza sativa Japonica Group]
Length = 344
Score = 95.5 bits (236), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 90/169 (53%), Gaps = 18/169 (10%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + TEE +HF KYG I + + D +T RGF F+ F D SV D + +
Sbjct: 34 GVAWETTEESFTKHFEKYGAISDSVIMKDKHTKMPRGFGFVTFSD------PSVIDKVLQ 87
Query: 166 GNHVINNKKIEAK----------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETE 215
H I+ + +E K K K+ KIFVGG+ P + ++++K HF+ +G ++E +
Sbjct: 88 DEHTIDGRTVEVKRTVPREEMSSKDGPKTRKIFVGGIPPSLTEDKLKEHFSSYGKVVEHQ 147
Query: 216 MPYDKSKSQRKNFCFITFEHESVVIDLLKNPK-QKINDKEVDVKKATPK 263
+ D + + F F+TFE+E V ++ + + K+V++KKA PK
Sbjct: 148 IMLDHGTGRSRGFGFVTFENEDAVERVMSEGRMHDLAGKQVEIKKAEPK 196
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
KIFVGG++ E +E HF ++G I ++ + DK + F F+TF SV+ +L++
Sbjct: 29 KIFVGGVAWETTEESFTKHFEKYGAISDSVIMKDKHTKMPRGFGFVTFSDPSVIDKVLQD 88
Query: 246 PKQKINDKEVDVKKATPKPE 265
+ I+ + V+VK+ P+ E
Sbjct: 89 -EHTIDGRTVEVKRTVPREE 107
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVE 654
GI +TE+ LKEHFS YG++ + D TGRSRGF F+ F++ +++E+ E
Sbjct: 123 GIPPSLTEDKLKEHFSSYGKVVEHQIMLDHGTGRSRGFGFVTFENEDAVERVMSE 177
Score = 38.9 bits (89), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
G+ + TEE +HF KYG I + + D +T RGF F+ F D ++K
Sbjct: 34 GVAWETTEESFTKHFEKYGAISDSVIMKDKHTKMPRGFGFVTFSDPSVIDK 84
>gi|308490851|ref|XP_003107617.1| CRE-MSI-1 protein [Caenorhabditis remanei]
gi|308250486|gb|EFO94438.1| CRE-MSI-1 protein [Caenorhabditis remanei]
Length = 335
Score = 95.5 bits (236), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 87/160 (54%), Gaps = 14/160 (8%)
Query: 113 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINN 172
E L+++F ++GE+ + DP T R+RGF FI F D S++K V+ H ++
Sbjct: 54 AENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSVDK-----VLNAREHELDG 108
Query: 173 KKIEAK---------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKS 223
KKI+ K K K+ K+F+GGLS E++K +F +G + + + YDK+
Sbjct: 109 KKIDPKVAFPKRTQAKLVTKTKKVFIGGLSATSTLEDLKQYFETYGKVEDAMLMYDKATQ 168
Query: 224 QRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ + F F+TF+ + V + + +IN K V+ KKA PK
Sbjct: 169 RHRGFGFVTFDSDEVADKVCEIHFHEINGKMVECKKAQPK 208
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 74/161 (45%), Gaps = 22/161 (13%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGN-HVINN 172
E+LK++F YG++E+ L D T R RGF F+ F E V D + E + H IN
Sbjct: 144 EDLKQYFETYGKVEDAMLMYDKATQRHRGFGFVTFDSDE------VADKVCEIHFHEING 197
Query: 173 KKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQ-------- 224
K +E KKA+ K + V ++ A +G ET + Y + +
Sbjct: 198 KMVECKKAQPKEVMLPV-----QLNKSRAAAARNLYGMPPETLLAYAQYLPRFGGNLMYP 252
Query: 225 --RKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
F F+TF+ + V + + +IN K V+ KKA PK
Sbjct: 253 GFGNGFGFVTFDSDEVADKVCEIHFHEINGKMVECKKAQPK 293
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 56/111 (50%)
Query: 153 SLEKASVEDVIAEGNHVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNII 212
SL + S +DV +N + GK+F+GGLS + E ++ +F +FG +
Sbjct: 9 SLREQSPQDVDGHEEARLNADSDDGSHGSQDPGKMFIGGLSWQTTAENLRDYFGRFGEVN 68
Query: 213 ETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
E + D + + + F FITF S V +L + +++ K++D K A PK
Sbjct: 69 ECMVMRDPATKRARGFGFITFVDPSSVDKVLNAREHELDGKKIDPKVAFPK 119
Score = 45.4 bits (106), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 28/44 (63%)
Query: 607 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
E L+++F ++GE+ + DP T R+RGF FI F D S++K
Sbjct: 54 AENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSVDK 97
Score = 42.4 bits (98), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 32/52 (61%), Gaps = 2/52 (3%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFY 659
E+LK++F YG++E+ L D T R RGF F+ F E +K V +++F+
Sbjct: 144 EDLKQYFETYGKVEDAMLMYDKATQRHRGFGFVTFDSDEVADK--VCEIHFH 193
>gi|222623166|gb|EEE57298.1| hypothetical protein OsJ_07373 [Oryza sativa Japonica Group]
Length = 459
Score = 95.5 bits (236), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 53/137 (38%), Positives = 76/137 (55%), Gaps = 15/137 (10%)
Query: 116 LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNKKI 175
KE+F KYGEI + + D T + RGF FI F D +V D + E NHVIN K++
Sbjct: 31 FKEYFGKYGEIVDAVIMKDRFTQKPRGFGFITFADP------AVVDRVIEDNHVINGKEV 84
Query: 176 EAKKAKAKSG---------KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRK 226
E K+ K KIFVGGL +K++E K F++FG ++E E+ D S ++ +
Sbjct: 85 EIKRTIPKGAAPLKDFKTKKIFVGGLPSALKEDEFKEFFSKFGKVVEHEIIRDHSTNRSR 144
Query: 227 NFCFITFEHESVVIDLL 243
F F+ F+ E V +LL
Sbjct: 145 GFGFVVFDAEKTVDELL 161
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Query: 182 AKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVID 241
A KIF+GGL + K +F ++G I++ + D+ + + F FITF +VV
Sbjct: 12 ASPAKIFIGGLPKDTTMGTFKEYFGKYGEIVDAVIMKDRFTQKPRGFGFITFADPAVVDR 71
Query: 242 LLKNPKQKINDKEVDVKKATPK 263
++++ IN KEV++K+ PK
Sbjct: 72 VIED-NHVINGKEVEIKRTIPK 92
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 42/71 (59%), Gaps = 5/71 (7%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+E KE FSK+G++ + D +T RSRGF F+VF D E +V++++A+ ++I+
Sbjct: 117 DEFKEFFSKFGKVVEHEIIRDHSTNRSRGFGFVVF-DAEK----TVDELLAKKGNMIDLN 171
Query: 174 KIEAKKAKAKS 184
+A + S
Sbjct: 172 GSQATRPSLPS 182
Score = 40.4 bits (93), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVED 655
D KE+F KYGEI + + D T + RGF FI F D +++ +ED
Sbjct: 25 DTTMGTFKEYFGKYGEIVDAVIMKDRFTQKPRGFGFITFADPAVVDRV-IED 75
Score = 39.3 bits (90), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 29/43 (67%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+E KE FSK+G++ + D +T RSRGF F+VF +++++
Sbjct: 117 DEFKEFFSKFGKVVEHEIIRDHSTNRSRGFGFVVFDAEKTVDE 159
>gi|380017405|ref|XP_003692647.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 27C-like [Apis
florea]
Length = 439
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 107/206 (51%), Gaps = 19/206 (9%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + T+E L+ +F +YGE+ + + + +GRSRGF F+ F D A+V V+
Sbjct: 19 GLSWETTQENLQRYFGRYGEVIDCVVMKNSESGRSRGFGFVTFSDP-----ANVPLVLQN 73
Query: 166 GNHVINNKKIEAK--------KAKAKSG--KIFVGGLSPEMKDEEIKAHFAQFGNIIETE 215
G H ++ + I+ K K K G K+F+GGL + + ++++ F +FG ++E
Sbjct: 74 GPHQLDGRTIDPKPCNPRTQQKPKRSGGFPKVFLGGLPSNVTETDLRSFFTRFGKVMEVV 133
Query: 216 MPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGVRGGRGG 275
+ YD+ K + + F F++FE E V + +N K+V++K+A P+ + G
Sbjct: 134 IMYDQEKKKSRGFGFLSFEDEDAVDRCVAEHFVNLNGKQVEIKRAEPRDSSSKMNDSHQG 193
Query: 276 RGGRGGRGGR---MAGGYGGYGGYGG 298
+ G +GG MAG G GG G
Sbjct: 194 QWGPPQQGGPPMGMAGNMGPMGGPNG 219
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 50/90 (55%)
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
+++ + + GK+FVGGLS E E ++ +F ++G +I+ + + + + F F+TF
Sbjct: 2 RVKTEMDDDEKGKLFVGGLSWETTQENLQRYFGRYGEVIDCVVMKNSESGRSRGFGFVTF 61
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ V +L+N +++ + +D K P+
Sbjct: 62 SDPANVPLVLQNGPHQLDGRTIDPKPCNPR 91
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 52/111 (46%), Gaps = 3/111 (2%)
Query: 427 VTGTDMMHMEVTEAVPMEIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKIND 486
VT TD+ ME++ + YD+ K + + F F++FE E V + +N
Sbjct: 114 VTETDLRSFFTRFGKVMEVV---IMYDQEKKKSRGFGFLSFEDEDAVDRCVAEHFVNLNG 170
Query: 487 KEVDVKKATPKPEPFGVRGGRGGRGGRGGRGGRMAGGYGGYGGYGGGYGEL 537
K+V++K+A P+ + G+ G +GG G G G GG G++
Sbjct: 171 KQVEIKRAEPRDSSSKMNDSHQGQWGPPQQGGPPMGMAGNMGPMGGPNGQM 221
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 26/41 (63%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESL 648
E L+ +F +YGE+ + + + +GRSRGF F+ F D ++
Sbjct: 27 ENLQRYFGRYGEVIDCVVMKNSESGRSRGFGFVTFSDPANV 67
Score = 39.3 bits (90), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 601 GIVDKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVE 654
G+ +TE +L+ F+++G++ V + D +SRGF F+ F+D +++++ E
Sbjct: 109 GLPSNVTETDLRSFFTRFGKVMEVVIMYDQEKKKSRGFGFLSFEDEDAVDRCVAE 163
>gi|302760911|ref|XP_002963878.1| hypothetical protein SELMODRAFT_4662 [Selaginella moellendorffii]
gi|302813190|ref|XP_002988281.1| hypothetical protein SELMODRAFT_4658 [Selaginella moellendorffii]
gi|300144013|gb|EFJ10700.1| hypothetical protein SELMODRAFT_4658 [Selaginella moellendorffii]
gi|300169146|gb|EFJ35749.1| hypothetical protein SELMODRAFT_4662 [Selaginella moellendorffii]
Length = 188
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/171 (34%), Positives = 95/171 (55%), Gaps = 14/171 (8%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTES-----LEKASVE 160
GI + TEE LK++F YGE+ + D TGR+RGF F+VF D L+K +++
Sbjct: 12 GISWETTEEKLKDYFQAYGEVVETVIMRDRTTGRARGFGFVVFSDPNCADRVLLDKHTID 71
Query: 161 DVIA----EGNHVI--NNKKIEAK--KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNII 212
+A E + V+ N + A +K+ KIFVGGL + +++ + +F QFG I
Sbjct: 72 GRVAVPRDEQHSVVKANGSAVAGPGGHASSKTKKIFVGGLGSNVTEDDFRKYFEQFGTIT 131
Query: 213 ETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ + YD + + + F FITF+ E V ++L ++ +K V+VK+A PK
Sbjct: 132 DVVVMYDHATQRPRGFGFITFDTEEAVDNVLHKTFHELKEKMVEVKRAVPK 182
Score = 46.6 bits (109), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 47/90 (52%), Gaps = 6/90 (6%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GK+F+GG+S E +E++K +F +G ++ET + D++ + + F F+ F + +L
Sbjct: 6 GKLFIGGISWETTEEKLKDYFQAYGEVVETVIMRDRTTGRARGFGFVVFSDPNCADRVL- 64
Query: 245 NPKQKINDKEVDVKKATPKPEPFGVRGGRG 274
++ +D + A P+ E V G
Sbjct: 65 -----LDKHTIDGRVAVPRDEQHSVVKANG 89
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVE 654
GI + TEE LK++F YGE+ + D TGR+RGF F+VF D ++ ++
Sbjct: 12 GISWETTEEKLKDYFQAYGEVVETVIMRDRTTGRARGFGFVVFSDPNCADRVLLD 66
>gi|296087606|emb|CBI34862.3| unnamed protein product [Vitis vinifera]
Length = 281
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 87/158 (55%), Gaps = 16/158 (10%)
Query: 113 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINN 172
+ + +HF KYGEI + + D TG+ RGF F+ + D SV D + + HVIN
Sbjct: 54 SAQFIKHFGKYGEITDSVIMKDRKTGQPRGFGFVTYADL------SVVDQVIQDTHVING 107
Query: 173 KKIEAKKA---------KAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKS 223
K++E K+ K+ KIFVGG+ + +EE K F Q+G + + ++ D S S
Sbjct: 108 KQVEIKRTIPKGAIGAKDFKTKKIFVGGIPATVTEEEFKDFFTQYGEVKDHQIMRDHSTS 167
Query: 224 QRKNFCFITFEHESVVIDLL-KNPKQKINDKEVDVKKA 260
+ + F F+TF+ E V DLL + K ++ +V++KKA
Sbjct: 168 RSRGFGFVTFDTEQAVDDLLSQGNKLELAGAQVEIKKA 205
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 182 AKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVID 241
A GKIF+GGL+ E + HF ++G I ++ + D+ Q + F F+T+ SVV
Sbjct: 38 ASPGKIFIGGLARETTSAQFIKHFGKYGEITDSVIMKDRKTGQPRGFGFVTYADLSVVDQ 97
Query: 242 LLKNPKQKINDKEVDVKKATPK 263
++++ IN K+V++K+ PK
Sbjct: 98 VIQD-THVINGKQVEIKRTIPK 118
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 54/85 (63%), Gaps = 7/85 (8%)
Query: 99 KNKMVSHPGIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 157
K K + GI +TEE K+ F++YGE+++ + D +T RSRGF F+ F DTE
Sbjct: 127 KTKKIFVGGIPATVTEEEFKDFFTQYGEVKDHQIMRDHSTSRSRGFGFVTF-DTEQ---- 181
Query: 158 SVEDVIAEGNHV-INNKKIEAKKAK 181
+V+D++++GN + + ++E KKA+
Sbjct: 182 AVDDLLSQGNKLELAGAQVEIKKAE 206
Score = 42.7 bits (99), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 35/55 (63%), Gaps = 2/55 (3%)
Query: 593 KNKMVSHPGIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTE 646
K K + GI +TEE K+ F++YGE+++ + D +T RSRGF F+ F DTE
Sbjct: 127 KTKKIFVGGIPATVTEEEFKDFFTQYGEVKDHQIMRDHSTSRSRGFGFVTF-DTE 180
Score = 39.3 bits (90), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 607 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVY 657
+ + +HF KYGEI + + D TG+ RGF F+ + D +++ ++D +
Sbjct: 54 SAQFIKHFGKYGEITDSVIMKDRKTGQPRGFGFVTYADLSVVDQV-IQDTH 103
>gi|171451948|dbj|BAG15902.1| musashi [Dugesia japonica]
Length = 327
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 89/163 (54%), Gaps = 18/163 (11%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
E L+ +F YG+I++V + DP T RSRGF F+ F +E +++E ++ H +++K
Sbjct: 31 ETLRNYFQNYGDIKDVMILKDPVTKRSRGFGFVTF-----IEYSTIEKILLNSPHFLDSK 85
Query: 174 KIEAKKA-------------KAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDK 220
KI+ K A K+ K+F+GGLS ++++A F ++G I E+ DK
Sbjct: 86 KIDPKIAIPKKPDLVDKSINTEKTRKVFIGGLSNNTVHKDLEAFFGKYGKIESCELMMDK 145
Query: 221 SKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
S ++ + F F+ FE E + + +IN K V+ KKA PK
Sbjct: 146 STNRHRGFGFVMFEKEEIANHICNIRYHEINSKMVEAKKALPK 188
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+F+GGLSP E ++ +F +G+I + + D + + F F+TF S + +L N
Sbjct: 18 KLFIGGLSPNTTLETLRNYFQNYGDIKDVMILKDPVTKRSRGFGFVTFIEYSTIEKILLN 77
Query: 246 PKQKINDKEVDVKKATPK 263
++ K++D K A PK
Sbjct: 78 SPHFLDSKKIDPKIAIPK 95
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 43/76 (56%), Gaps = 10/76 (13%)
Query: 109 VHKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGN- 167
VHK +L+ F KYG+IE+ L D +T R RGF F++F EK + + I
Sbjct: 122 VHK---DLEAFFGKYGKIESCELMMDKSTNRHRGFGFVMF------EKEEIANHICNIRY 172
Query: 168 HVINNKKIEAKKAKAK 183
H IN+K +EAKKA K
Sbjct: 173 HEINSKMVEAKKALPK 188
Score = 47.0 bits (110), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 32/51 (62%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYF 658
E L+ +F YG+I++V + DP T RSRGF F+ F + ++EK + +F
Sbjct: 31 ETLRNYFQNYGDIKDVMILKDPVTKRSRGFGFVTFIEYSTIEKILLNSPHF 81
Score = 38.9 bits (89), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 28/43 (65%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTE 646
+ + ++L+ F KYG+IE+ L D +T R RGF F++F+ E
Sbjct: 120 NTVHKDLEAFFGKYGKIESCELMMDKSTNRHRGFGFVMFEKEE 162
>gi|357482897|ref|XP_003611735.1| RNA-binding protein [Medicago truncatula]
gi|355513070|gb|AES94693.1| RNA-binding protein [Medicago truncatula]
Length = 403
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 98/197 (49%), Gaps = 33/197 (16%)
Query: 113 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDV--IAEGNHVI 170
TE LKE+ SKYGE+E+ + + +TGRSRGF ++ F ASV+D + G HV+
Sbjct: 17 TEGLKEYMSKYGELEDCIVMKERSTGRSRGFGYVTF--------ASVDDAKEVLSGEHVL 68
Query: 171 NNKKIEAKKAKAKS---------GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKS 221
++ +E K A K +IFV + P + +E ++HF ++G+I + MP D+
Sbjct: 69 GDRMLEVKVATPKEEMRAPAKKVTRIFVARIPPSVTEETFRSHFEKYGDITDLYMPKDQG 128
Query: 222 KSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGVRGGRGGRGGRGG 281
+ FITF + V +L+ ++ V V +ATPK V+
Sbjct: 129 SKMHRGIGFITFGNAESVENLMSE-THELGGSAVVVDRATPKAREDDVKP---------- 177
Query: 282 RGGRMA--GGYGGYGGY 296
GRM+ GGYG Y Y
Sbjct: 178 -TGRMSQGGGYGAYNAY 193
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 82/210 (39%), Gaps = 56/210 (26%)
Query: 108 IVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLE----------- 155
I +TEE + HF KYG+I ++ + D + RG FI F + ES+E
Sbjct: 99 IPPSVTEETFRSHFEKYGDITDLYMPKDQGSKMHRGIGFITFGNAESVENLMSETHELGG 158
Query: 156 ----------KASVEDVIAEGNH---------------------------------VINN 172
KA +DV G + +
Sbjct: 159 SAVVVDRATPKAREDDVKPTGRMSQGGGYGAYNAYISTATRYAALGAPTLYDHPGPIYGS 218
Query: 173 KKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFIT 232
K + + S KIFVG L PE E+++ +F +FG I + +P D ++ + F F+T
Sbjct: 219 KHGRGEPRRRISKKIFVGRLPPEANSEDLRQYFGRFGRIEDVYIPRDPKRTGHRGFGFVT 278
Query: 233 FEHESVVIDLLKNPKQKINDKEVDVKKATP 262
F E V + P +I EV + ATP
Sbjct: 279 FADEGVADRVSLRP-HEICGHEVAIDSATP 307
Score = 47.0 bits (110), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 87/221 (39%), Gaps = 58/221 (26%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGV 503
+I + MP D+ + FITF + V +L+ ++ V V +ATPK V
Sbjct: 117 DITDLYMPKDQGSKMHRGIGFITFGNAESVENLMSE-THELGGSAVVVDRATPKAREDDV 175
Query: 504 RGGRGGRGGRGGRGGRMAGGYGGYGGYGGGYGELDYLQLWQFFDWISSSFSENCLLEDSI 563
+ GRM+ G GGYG Y +IS++
Sbjct: 176 KPT-----------GRMSQG-GGYGAYNA---------------YISTA----------- 197
Query: 564 GKPLTVSCSHYHYLFDQNLRTHYFYIVEAKN------KMVSHPGIVDKI-----TEELKE 612
+ Y L L H I +K+ + +S V ++ +E+L++
Sbjct: 198 --------TRYAALGAPTLYDHPGPIYGSKHGRGEPRRRISKKIFVGRLPPEANSEDLRQ 249
Query: 613 HFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASV 653
+F ++G IE+V + DP RGF F+ F D ++ S+
Sbjct: 250 YFGRFGRIEDVYIPRDPKRTGHRGFGFVTFADEGVADRVSL 290
Score = 45.4 bits (106), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 33/53 (62%), Gaps = 8/53 (15%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDV 656
D TE LKE+ SKYGE+E+ + + +TGRSRGF ++ F ASV+D
Sbjct: 14 DVDTEGLKEYMSKYGELEDCIVMKERSTGRSRGFGYVTF--------ASVDDA 58
Score = 43.5 bits (101), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 18/78 (23%)
Query: 113 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKAS-------------- 158
+E+L+++F ++G IE+V + DP RGF F+ F D ++ S
Sbjct: 244 SEDLRQYFGRFGRIEDVYIPRDPKRTGHRGFGFVTFADEGVADRVSLRPHEICGHEVAID 303
Query: 159 ----VEDVIAEGNHVINN 172
V+D GN ++NN
Sbjct: 304 SATPVDDARPSGNFMMNN 321
Score = 39.3 bits (90), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 602 IVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLE 649
I +TEE + HF KYG+I ++ + D + RG FI F + ES+E
Sbjct: 99 IPPSVTEETFRSHFEKYGDITDLYMPKDQGSKMHRGIGFITFGNAESVE 147
>gi|195158385|ref|XP_002020072.1| GL13791 [Drosophila persimilis]
gi|194116841|gb|EDW38884.1| GL13791 [Drosophila persimilis]
Length = 431
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 92/164 (56%), Gaps = 7/164 (4%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKAS------V 159
G+ ++ T++ LK HF K+G+I +V + DP T RSRGF FI + + +++A +
Sbjct: 32 GLDYRTTDDNLKAHFEKWGQIVDVVVMKDPRTKRSRGFGFITYSHSTMIDEAQKARPHKI 91
Query: 160 EDVIAEGNHVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYD 219
+ + E + + I++ A A K+FVG L + ++ ++ +F FG+I++ + D
Sbjct: 92 DGRVVEPKRAVPRQDIDSPNAGATVKKLFVGALKDDHDEQSLRDYFQHFGSIVDINIVMD 151
Query: 220 KSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
K +++ F F+ F+ V ++ + ++N K VDVKKA PK
Sbjct: 152 KETGKKRGFAFVEFDDYDPVDKVVLQKQHQLNGKMVDVKKALPK 195
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 47/80 (58%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+F+GGL D+ +KAHF ++G I++ + D + + F FIT+ H +++ + K
Sbjct: 27 KLFIGGLDYRTTDDNLKAHFEKWGQIVDVVVMKDPRTKRSRGFGFITYSHSTMIDEAQKA 86
Query: 246 PKQKINDKEVDVKKATPKPE 265
KI+ + V+ K+A P+ +
Sbjct: 87 RPHKIDGRVVEPKRAVPRQD 106
Score = 45.8 bits (107), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 29/45 (64%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKAS 652
+ LK HF K+G+I +V + DP T RSRGF FI + + +++A
Sbjct: 40 DNLKAHFEKWGQIVDVVVMKDPRTKRSRGFGFITYSHSTMIDEAQ 84
Score = 40.8 bits (94), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 31/51 (60%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVE 654
D + L+++F +G I ++ + D TG+ RGFAF+ F D + ++K ++
Sbjct: 127 DHDEQSLRDYFQHFGSIVDINIVMDKETGKKRGFAFVEFDDYDPVDKVVLQ 177
>gi|452840783|gb|EME42721.1| hypothetical protein DOTSEDRAFT_73510 [Dothistroma septosporum
NZE10]
Length = 529
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 89/150 (59%), Gaps = 2/150 (1%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
E LK +FS++GE+ T+ D TGRSRGF F+ FKD +++ V++ +G +I+ K
Sbjct: 115 ESLKNYFSQFGEVIECTVMRDGATGRSRGFGFLTFKDPKTVNTVMVKEHQLDG-KLIDPK 173
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
+ + + ++ KIFVGG+S + + + K F +FG +++ + DK + + F F+TF
Sbjct: 174 RAIPRDEQERTAKIFVGGVSQDATESDFKEFFMKFGRVLDATLMMDKDTGRPRGFGFVTF 233
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+++ V L+ P I K ++VK+A P+
Sbjct: 234 DNDLAVERTLEGPL-SILGKPIEVKRAQPR 262
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 161 DVIAEGNHVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDK 220
D +G +++ E + GK+F+GGL+ E DE +K +F+QFG +IE + D
Sbjct: 77 DNYQDGGGYQDSRPEERPIGTKEDGKMFIGGLNWETTDESLKNYFSQFGEVIECTVMRDG 136
Query: 221 SKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE 265
+ + + F F+TF+ V ++ + +++ K +D K+A P+ E
Sbjct: 137 ATGRSRGFGFLTFKDPKTVNTVMVK-EHQLDGKLIDPKRAIPRDE 180
Score = 47.4 bits (111), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 32/48 (66%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVED 655
E LK +FS++GE+ T+ D TGRSRGF F+ FKD +++ V++
Sbjct: 115 ESLKNYFSQFGEVIECTVMRDGATGRSRGFGFLTFKDPKTVNTVMVKE 162
Score = 43.1 bits (100), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Query: 601 GIVDKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
G+ TE + KE F K+G + + TL D +TGR RGF F+ F + ++E+
Sbjct: 191 GVSQDATESDFKEFFMKFGRVLDATLMMDKDTGRPRGFGFVTFDNDLAVER 241
>gi|198431578|ref|XP_002128542.1| PREDICTED: similar to heterogeneous nuclear ribonucleoprotein A3
[Ciona intestinalis]
Length = 334
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/171 (33%), Positives = 94/171 (54%), Gaps = 17/171 (9%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
GI ++ T+E + ++FSKYG+IE+ + D +TGRS+GF F+ F +TE+ A ++D
Sbjct: 19 GISYETTDESMNDYFSKYGKIEDCVVIKDSSTGRSKGFGFVTF-ETEAEADACMDDR--- 74
Query: 166 GNHVINNKKIEAKKAKAKS-----------GKIFVGGLSPEMKDEEIKAHFAQFGNIIET 214
H +N+++I+ K+A ++ KIF+GGL + +K +F QFG I
Sbjct: 75 -PHTLNSRQIDVKRAVSREESVKPGAHFQVKKIFIGGLKDGCDETNLKEYFGQFGTIETF 133
Query: 215 EMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE 265
E+P ++ + + F FITFE V L+ +N +VKKA K E
Sbjct: 134 ELPLERDSEKPRGFAFITFEDHDTVDKLVAKRHHYVNGVRCEVKKALSKAE 184
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 47/80 (58%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+F+GG+S E DE + +F+++G I + + D S + K F F+TFE E+ + +
Sbjct: 14 KLFIGGISYETTDESMNDYFSKYGKIEDCVVIKDSSTGRSKGFGFVTFETEAEADACMDD 73
Query: 246 PKQKINDKEVDVKKATPKPE 265
+N +++DVK+A + E
Sbjct: 74 RPHTLNSRQIDVKRAVSREE 93
Score = 45.4 bits (106), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVED 655
E + ++FSKYG+IE+ + D +TGRS+GF F+ F +TE+ A ++D
Sbjct: 27 ESMNDYFSKYGKIEDCVVIKDSSTGRSKGFGFVTF-ETEAEADACMDD 73
Score = 39.3 bits (90), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 29/41 (70%)
Query: 610 LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
LKE+F ++G IE L + ++ + RGFAFI F+D ++++K
Sbjct: 120 LKEYFGQFGTIETFELPLERDSEKPRGFAFITFEDHDTVDK 160
>gi|226483449|emb|CAX74025.1| Heterogeneous nuclear ribonucleoprotein 27C [Schistosoma japonicum]
Length = 543
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 96/165 (58%), Gaps = 14/165 (8%)
Query: 107 GIVHKIT--EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIA 164
G +H+ T + LK +FSK+G+IE T+ D TGRSRGF ++ FK+ ES V+ V+
Sbjct: 16 GGLHQSTTNDSLKLYFSKFGDIEESTVMMDNRTGRSRGFGYVKFKNDES-----VDWVLR 70
Query: 165 EGNHVINNKKIEAKKAKA-------KSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMP 217
+ H+I+ K+++ K+ +S K+FVGG++ + + I+ F+ +G + + +
Sbjct: 71 QKTHLIDLKEVDPKRCNVNMKGKNRRSLKVFVGGIAFDHDENIIRNFFSSYGRVTDVNLL 130
Query: 218 YDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATP 262
++K + + F F+ FE E VV +L+K +N K+V++K P
Sbjct: 131 AGQTKPRHRGFAFVGFEDEEVVRNLIKLHYLNLNGKQVEIKAMKP 175
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 45/76 (59%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GK+FVGGL ++ +K +F++FG+I E+ + D + + F ++ F+++ V +L+
Sbjct: 11 GKLFVGGLHQSTTNDSLKLYFSKFGDIEESTVMMDNRTGRSRGFGYVKFKNDESVDWVLR 70
Query: 245 NPKQKINDKEVDVKKA 260
I+ KEVD K+
Sbjct: 71 QKTHLIDLKEVDPKRC 86
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 31/42 (73%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLE 649
+ LK +FSK+G+IE T+ D TGRSRGF ++ FK+ ES++
Sbjct: 25 DSLKLYFSKFGDIEESTVMMDNRTGRSRGFGYVKFKNDESVD 66
>gi|317419098|emb|CBN81136.1| RNA-binding protein Musashi homolog 1 [Dicentrarchus labrax]
Length = 369
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/258 (31%), Positives = 122/258 (47%), Gaps = 30/258 (11%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVI-- 163
G+ + T+E LKE+F K+GE++ + DP T RSRGF F V T V VI
Sbjct: 28 GLSWQTTQEGLKEYFCKFGEVKECMVMRDPVTKRSRGFGFYV---TLVDALGHVRFVIRS 84
Query: 164 -----AEGNHVINNKKIEAKKAKAK----SGKIFVGGLSPEMKDEEIKAHFAQFGNIIET 214
+I+ K ++A+ K + KIFVGGLS E++K +F QFG + +
Sbjct: 85 RALSQERDERIIDPKVAFPRRAQPKLVTRTKKIFVGGLSVNTTIEDVKHYFDQFGKVDDA 144
Query: 215 EMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKP--EPFGVRGG 272
+ +DK+ ++ + F F+TFE+E VV + + +IN+K V+ KKA PK P G G
Sbjct: 145 MLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMTPTGSARG 204
Query: 273 RGGRGGRGGRGGRMAGGYGGYGGY------GGGYGGILYKPLLFYELNELGISGRSLVCR 326
R G + G GY G+ Y GI P Y+ E + L+
Sbjct: 205 RSRVMPYGMDAFMLGIGMLGYPGFQTTTYTSRSYSGI--APGYTYQFPEFHLERTPLLTS 262
Query: 327 TGPMVQATPPLAEVDVTG 344
+ P P LA + +T
Sbjct: 263 SHP-----PELAAIPLTA 275
Score = 43.1 bits (100), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 37/57 (64%), Gaps = 2/57 (3%)
Query: 603 VDKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFY 659
V+ E++K +F ++G++++ L D T R RGF F+ F++ + +EK V +++F+
Sbjct: 124 VNTTIEDVKHYFDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEK--VCEIHFH 178
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 452 YDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKP--EPFGVRGGRGG 509
+DK+ ++ + F F+TFE+E VV + + +IN+K V+ KKA PK P G GR
Sbjct: 148 FDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMTPTGSARGRSR 207
Query: 510 RGGRGGRGGRMAGGYGGYGGY 530
G + G GY G+
Sbjct: 208 VMPYGMDAFMLGIGMLGYPGF 228
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 23/34 (67%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIV 641
E LKE+F K+GE++ + DP T RSRGF F V
Sbjct: 36 EGLKEYFCKFGEVKECMVMRDPVTKRSRGFGFYV 69
>gi|195387610|ref|XP_002052487.1| GJ21323 [Drosophila virilis]
gi|194148944|gb|EDW64642.1| GJ21323 [Drosophila virilis]
Length = 421
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 99/195 (50%), Gaps = 25/195 (12%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + T+E L +F ++G+I + + + +GRSRGF F+ F D A+V V+
Sbjct: 13 GLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFAD-----PANVNHVLQS 67
Query: 166 GNHVINNKKIEAKKA------KAKSG---KIFVGGLSPEMKDEEIKAHFAQFGNIIETEM 216
G H ++ + I+ K K K G K+F+GGL + + +++ F ++G + E +
Sbjct: 68 GPHTLDGRTIDPKPCNPRTLQKPKKGGGYKVFLGGLPSNVTETDLRTFFGRYGKVTEVVI 127
Query: 217 PYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGVRGGRGGR 276
YD+ K + + F F++FE ES V + +N K+V++KKA P R G
Sbjct: 128 MYDQEKKKSRGFGFLSFEEESSVEHVTNERYINLNGKQVEIKKAEP----------RDGS 177
Query: 277 GGRGGRGGRMAGGYG 291
GG+ + G YG
Sbjct: 178 GGQNSNNSAVGGAYG 192
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 44/79 (55%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GK+FVGGLS E E + +F +FG+II+ + + + + F F+TF + V +L+
Sbjct: 7 GKLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPANVNHVLQ 66
Query: 245 NPKQKINDKEVDVKKATPK 263
+ ++ + +D K P+
Sbjct: 67 SGPHTLDGRTIDPKPCNPR 85
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 10/82 (12%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGV 503
++ E + YD+ K + + F F++FE ES V + +N K+V++KKA P
Sbjct: 121 KVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNERYINLNGKQVEIKKAEP------- 173
Query: 504 RGGRGGRGGRGGRGGRMAGGYG 525
R G GG+ + G YG
Sbjct: 174 ---RDGSGGQNSNNSAVGGAYG 192
>gi|51860098|gb|AAU11302.1| RNA-binding protein AUF1 [Paracentrotus lividus]
Length = 296
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 91/155 (58%), Gaps = 10/155 (6%)
Query: 116 LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNKKI 175
L+++FS YG +++ +K D T + RGF FI+F+ +S+ K V+ H +++K I
Sbjct: 1 LQQYFSAYGTVQDCEIKKDQVTKKPRGFGFILFESADSVTK-----VLDVPEHKVDDKTI 55
Query: 176 EAKKAK-----AKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCF 230
+ K A K KIF+GG+ ++KD++IK++F+QFG ++ETE P DK+ +R F F
Sbjct: 56 DPKPANPLKKPEKKKKIFIGGIGSDLKDDDIKSYFSQFGTVVETEFPEDKTTGRRLGFAF 115
Query: 231 ITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE 265
+ +E + I++K+V+V +A + E
Sbjct: 116 VKYETSDEAQKAQNSRFHTISNKKVEVSEAVSREE 150
Score = 43.1 bits (100), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 39/70 (55%), Gaps = 5/70 (7%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+++K +FS++G + D TGR GFAF+ ++ ++ +KA H I+NK
Sbjct: 84 DDIKSYFSQFGTVVETEFPEDKTTGRRLGFAFVKYETSDEAQKAQNSRF-----HTISNK 138
Query: 174 KIEAKKAKAK 183
K+E +A ++
Sbjct: 139 KVEVSEAVSR 148
Score = 40.0 bits (92), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 28/41 (68%)
Query: 610 LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
L+++FS YG +++ +K D T + RGF FI+F+ +S+ K
Sbjct: 1 LQQYFSAYGTVQDCEIKKDQVTKKPRGFGFILFESADSVTK 41
>gi|289739881|gb|ADD18688.1| RNA-binding protein musashi [Glossina morsitans morsitans]
Length = 422
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 92/167 (55%), Gaps = 15/167 (8%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + T+E L +F ++G+I + + + +GRSRGF F+ F D A+V+ V+
Sbjct: 13 GLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFAD-----PANVQHVLQS 67
Query: 166 GNHVINNKKIEAKKA------KAKSG---KIFVGGLSPEMKDEEIKAHFAQFGNIIETEM 216
G H ++ + I+ K K K G K+F+GGL + + +++ F ++G + E +
Sbjct: 68 GPHTLDGRTIDPKPCNPRTLQKPKKGGGYKVFLGGLPSNVTETDLRTFFGRYGKVTEVVI 127
Query: 217 PYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
YD+ K + + F F++FE ES V + +N K+V++KKA P+
Sbjct: 128 MYDQEKKKSRGFGFLSFEEESSVEHVTNERYINLNGKQVEIKKAEPR 174
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 44/79 (55%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GK+FVGGLS E E + +F +FG+II+ + + + + F F+TF + V +L+
Sbjct: 7 GKLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPANVQHVLQ 66
Query: 245 NPKQKINDKEVDVKKATPK 263
+ ++ + +D K P+
Sbjct: 67 SGPHTLDGRTIDPKPCNPR 85
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 32/54 (59%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 497
++ E + YD+ K + + F F++FE ES V + +N K+V++KKA P+
Sbjct: 121 KVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNERYINLNGKQVEIKKAEPR 174
>gi|167999759|ref|XP_001752584.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696115|gb|EDQ82455.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 380
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 98/196 (50%), Gaps = 22/196 (11%)
Query: 113 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINN 172
TE L+++ K+GE+++V + D TGRSRGF ++ F E +K H +N
Sbjct: 12 TEGLRQYMLKFGELDDVIVMKDRGTGRSRGFGYVTFATVEDAKKT------VSTQHSLNG 65
Query: 173 KKIEAKKAKAKS---------GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKS 223
+ +E K A K ++FV + P + DE +++F ++G + + MP D+
Sbjct: 66 RMLEVKVATPKEEMKPPAKKITRVFVARIPPSVTDEAFRSYFEKYGTLTDAYMPKDQGSK 125
Query: 224 QRKNFCFITFE-HESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGVRG-GRGGRGGRGG 281
+ F+TFE ESV D L N ++ + V +ATPK + GV+ GRG GG
Sbjct: 126 AHRGIGFVTFEIPESV--DRLMNETHELGGSTIAVDRATPKED--GVKTWGRGFHGGNQN 181
Query: 282 RGGRM-AGGYGGYGGY 296
G +G YG YG Y
Sbjct: 182 SGSNAGSGSYGAYGVY 197
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDL-LK 244
KIFVG L PE E+++ +F FG I + +P D K+ + F F+TF E + L+
Sbjct: 237 KIFVGRLPPEANAEDLRRYFNNFGRISDVYVPKDAKKTSHRGFGFVTFSDEGAAERVALR 296
Query: 245 NPKQKINDKEVDVKKATPKPE 265
N +I ++ V +A P+ E
Sbjct: 297 N--HEILGHQIAVDRAAPQDE 315
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 88/215 (40%), Gaps = 34/215 (15%)
Query: 445 IIETEMPYDKSKSQRKNFCFITFE-HESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGV 503
+ + MP D+ + F+TFE ESV D L N ++ + V +ATPK + GV
Sbjct: 113 LTDAYMPKDQGSKAHRGIGFVTFEIPESV--DRLMNETHELGGSTIAVDRATPKED--GV 168
Query: 504 RG-GRGGRGGRGGRGGRM-AGGYGGYGGYGGGYGELDYLQLWQFFDW-ISSSFSENCLLE 560
+ GRG GG G +G YG YG Y + +D+ +S SF
Sbjct: 169 KTWGRGFHGGNQNSGSNAGSGSYGAYGVYTNTARFGGLGGGFGAYDYPVSGSFG------ 222
Query: 561 DSIGKPLTVSCSHYHYLFDQNLRTHYFYIVEAKNKMVSHPGIVDKITEELKEHFSKYGEI 620
S G P+ +F L EA E+L+ +F+ +G I
Sbjct: 223 -SGGPPVPPLRGLGTKIFVGRLPP------EAN-------------AEDLRRYFNNFGRI 262
Query: 621 ENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVED 655
+V + D RGF F+ F D + E+ ++ +
Sbjct: 263 SDVYVPKDAKKTSHRGFGFVTFSDEGAAERVALRN 297
Score = 43.9 bits (102), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 30/47 (63%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D TE L+++ K+GE+++V + D TGRSRGF ++ F E +K
Sbjct: 9 DVDTEGLRQYMLKFGELDDVIVMKDRGTGRSRGFGYVTFATVEDAKK 55
>gi|195052284|ref|XP_001993272.1| GH13720 [Drosophila grimshawi]
gi|193900331|gb|EDV99197.1| GH13720 [Drosophila grimshawi]
Length = 421
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 99/195 (50%), Gaps = 25/195 (12%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + T+E L +F ++G+I + + + +GRSRGF F+ F D A+V V+
Sbjct: 13 GLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFAD-----PANVNHVLQN 67
Query: 166 GNHVINNKKIEAKKA------KAKSG---KIFVGGLSPEMKDEEIKAHFAQFGNIIETEM 216
G H ++ + I+ K K K G K+F+GGL + + +++ F ++G + E +
Sbjct: 68 GPHTLDGRTIDPKPCNPRTLQKPKKGGGYKVFLGGLPSNVTETDLRTFFGRYGKVTEVVI 127
Query: 217 PYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGVRGGRGGR 276
YD+ K + + F F++FE ES V + +N K+V++KKA P R G
Sbjct: 128 MYDQEKKKSRGFGFLSFEEESSVEHVTNERYINLNGKQVEIKKAEP----------RDGS 177
Query: 277 GGRGGRGGRMAGGYG 291
GG+ + G YG
Sbjct: 178 GGQNSNNSAVGGAYG 192
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 44/79 (55%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GK+FVGGLS E E + +F +FG+II+ + + + + F F+TF + V +L+
Sbjct: 7 GKLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPANVNHVLQ 66
Query: 245 NPKQKINDKEVDVKKATPK 263
N ++ + +D K P+
Sbjct: 67 NGPHTLDGRTIDPKPCNPR 85
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 10/82 (12%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGV 503
++ E + YD+ K + + F F++FE ES V + +N K+V++KKA P
Sbjct: 121 KVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNERYINLNGKQVEIKKAEP------- 173
Query: 504 RGGRGGRGGRGGRGGRMAGGYG 525
R G GG+ + G YG
Sbjct: 174 ---RDGSGGQNSNNSAVGGAYG 192
>gi|388500070|gb|AFK38101.1| unknown [Lotus japonicus]
gi|388508218|gb|AFK42175.1| unknown [Lotus japonicus]
Length = 373
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 90/172 (52%), Gaps = 18/172 (10%)
Query: 107 GIVHKIT-EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + T + +HF KYGEI + + D T + RGF FI + D SV D + E
Sbjct: 51 GLARETTIAQFIKHFGKYGEITDSVIMKDRKTAQPRGFGFITYAD------PSVVDKVIE 104
Query: 166 GNHVINNKKIEAKKA---------KAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEM 216
H+IN K++E K+ K+ KIFVGG+ + ++E + F ++G + + ++
Sbjct: 105 DTHIINGKQVEIKRTIPRGAVGSKDFKTKKIFVGGIPSNVTEDEFRDFFTRYGEVKDNQI 164
Query: 217 PYDKSKSQRKNFCFITFEHESVVIDLLK-NPKQKINDKEVDVKKATP-KPEP 266
D S ++ + F FITF+ E V DLL K +V++KKA P KP P
Sbjct: 165 MRDHSTNRSRGFGFITFDSEDAVDDLLSMGNKIDFAGTQVEIKKAEPKKPNP 216
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 49/82 (59%), Gaps = 1/82 (1%)
Query: 182 AKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVID 241
A GKIF+GGL+ E + HF ++G I ++ + D+ +Q + F FIT+ SVV
Sbjct: 42 ASPGKIFIGGLARETTIAQFIKHFGKYGEITDSVIMKDRKTAQPRGFGFITYADPSVVDK 101
Query: 242 LLKNPKQKINDKEVDVKKATPK 263
++++ IN K+V++K+ P+
Sbjct: 102 VIED-THIINGKQVEIKRTIPR 122
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 53/87 (60%), Gaps = 7/87 (8%)
Query: 99 KNKMVSHPGIVHKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 157
K K + GI +TE E ++ F++YGE+++ + D +T RSRGF FI F D+E
Sbjct: 131 KTKKIFVGGIPSNVTEDEFRDFFTRYGEVKDNQIMRDHSTNRSRGFGFITF-DSED---- 185
Query: 158 SVEDVIAEGNHV-INNKKIEAKKAKAK 183
+V+D+++ GN + ++E KKA+ K
Sbjct: 186 AVDDLLSMGNKIDFAGTQVEIKKAEPK 212
Score = 43.9 bits (102), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Query: 593 KNKMVSHPGIVDKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLE 649
K K + GI +TE E ++ F++YGE+++ + D +T RSRGF FI F ++++
Sbjct: 131 KTKKIFVGGIPSNVTEDEFRDFFTRYGEVKDNQIMRDHSTNRSRGFGFITFDSEDAVD 188
Score = 39.7 bits (91), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 609 ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVY 657
+ +HF KYGEI + + D T + RGF FI + D ++K +ED +
Sbjct: 60 QFIKHFGKYGEITDSVIMKDRKTAQPRGFGFITYADPSVVDKV-IEDTH 107
>gi|428181280|gb|EKX50144.1| hypothetical protein GUITHDRAFT_67277, partial [Guillardia theta
CCMP2712]
Length = 186
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 90/167 (53%), Gaps = 11/167 (6%)
Query: 107 GIVHKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKAS------- 158
GI TE +LK HF ++G + +V + D NTG+ RGF F+ F D + + +
Sbjct: 6 GITLDTTEMDLKSHFEQFGSLTDVVVMRDKNTGKGRGFGFVTFNDPAGIPRFTLHGGLTD 65
Query: 159 --VEDVIAEGNHVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEM 216
V D + G H I I A + ++ K+FVGG++ + +++ +F ++G + + ++
Sbjct: 66 VLVADNVVRGRHEIRGPGISADDS-LQTSKVFVGGIASTVTTQDLYEYFGKYGEVEDVQV 124
Query: 217 PYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
D + + F F+TF+H V D++ + ++++K V++K A PK
Sbjct: 125 MVDPQTHRSRGFAFVTFKHAETVQDVMNYQEHELHNKRVEIKLAVPK 171
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 48/72 (66%), Gaps = 5/72 (6%)
Query: 113 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINN 172
T++L E+F KYGE+E+V + DP T RSRGFAF+ FK E+ V+DV+ H ++N
Sbjct: 106 TQDLYEYFGKYGEVEDVQVMVDPQTHRSRGFAFVTFKHAET-----VQDVMNYQEHELHN 160
Query: 173 KKIEAKKAKAKS 184
K++E K A KS
Sbjct: 161 KRVEIKLAVPKS 172
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 33/43 (76%)
Query: 607 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLE 649
T++L E+F KYGE+E+V + DP T RSRGFAF+ FK E+++
Sbjct: 106 TQDLYEYFGKYGEVEDVQVMVDPQTHRSRGFAFVTFKHAETVQ 148
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 601 GIVDKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKD 644
GI TE +LK HF ++G + +V + D NTG+ RGF F+ F D
Sbjct: 6 GITLDTTEMDLKSHFEQFGSLTDVVVMRDKNTGKGRGFGFVTFND 50
Score = 43.5 bits (101), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 33/48 (68%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
K+F+GG++ + + ++K+HF QFG++ + + DK+ + + F F+TF
Sbjct: 1 KLFIGGITLDTTEMDLKSHFEQFGSLTDVVVMRDKNTGKGRGFGFVTF 48
Score = 38.9 bits (89), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 32/54 (59%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 497
E+ + ++ D + + F F+TF+H V D++ + ++++K V++K A PK
Sbjct: 118 EVEDVQVMVDPQTHRSRGFAFVTFKHAETVQDVMNYQEHELHNKRVEIKLAVPK 171
>gi|17554332|ref|NP_497799.1| Protein MSI-1 [Caenorhabditis elegans]
gi|10047307|dbj|BAB13470.1| neural RNA-binding protein MSI-1 [Caenorhabditis elegans]
gi|18376536|emb|CAA84667.2| Protein MSI-1 [Caenorhabditis elegans]
Length = 320
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 87/159 (54%), Gaps = 14/159 (8%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
E L+++F ++GE+ + DP T R+RGF FI F D S++K V+ H ++ K
Sbjct: 59 ENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSVDK-----VLNNREHELDGK 113
Query: 174 KIEAK---------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQ 224
KI+ K K K+ K+F+GGLS E++K +F +G + + + +DK+ +
Sbjct: 114 KIDPKVAFPKRTQAKLVTKTKKVFIGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQR 173
Query: 225 RKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ F F+TF+ + V + + +IN K V+ KKA PK
Sbjct: 174 HRGFGFVTFDSDEVADKVCEIHFHEINGKMVECKKAQPK 212
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 47/79 (59%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GK+F+GGLS + E ++ +F +FG + E + D + + + F FITF S V +L
Sbjct: 45 GKMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSVDKVLN 104
Query: 245 NPKQKINDKEVDVKKATPK 263
N + +++ K++D K A PK
Sbjct: 105 NREHELDGKKIDPKVAFPK 123
Score = 45.8 bits (107), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 28/43 (65%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
E L+++F ++GE+ + DP T R+RGF FI F D S++K
Sbjct: 59 ENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSVDK 101
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 32/52 (61%), Gaps = 2/52 (3%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFY 659
E++K++F YG++E+ L D T R RGF F+ F E +K V +++F+
Sbjct: 148 EDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTFDSDEVADK--VCEIHFH 197
>gi|338718482|ref|XP_001499079.3| PREDICTED: hypothetical protein LOC100069254 [Equus caballus]
Length = 455
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/129 (41%), Positives = 78/129 (60%), Gaps = 3/129 (2%)
Query: 117 KEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNKK-I 175
K++F+K E+ + T+K DPN GRSRG FI+FKD S+EK + G H +N+KK +
Sbjct: 76 KDYFTKLREVVDRTIKMDPNIGRSRGLGFILFKDVASVEKVLDQKERKVGGHRMNHKKAV 135
Query: 176 EAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEH 235
KK K KIFVGGL+PE +E+I+ +F +FG I E D ++R+ FI F+
Sbjct: 136 TMKKDPMK--KIFVGGLNPEATEEKIREYFGKFGEIEAIEFSLDPESNKRQGSVFIAFKE 193
Query: 236 ESVVIDLLK 244
E V +L+
Sbjct: 194 EEPVRSILE 202
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 30/40 (75%)
Query: 611 KEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
K++F+K E+ + T+K DPN GRSRG FI+FKD S+EK
Sbjct: 76 KDYFTKLREVVDRTIKMDPNIGRSRGLGFILFKDVASVEK 115
Score = 42.7 bits (99), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 42/80 (52%), Gaps = 10/80 (12%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTES----LEK------ASVEDVI 163
E+++E+F K+GEIE + DP + + +G FI FK+ E LEK + D
Sbjct: 157 EKIREYFGKFGEIEAIEFSLDPESNKRQGSVFIAFKEEEPVRSILEKFHTISGSKRSDNE 216
Query: 164 AEGNHVINNKKIEAKKAKAK 183
E ++ N KI + K KAK
Sbjct: 217 NENDYNTNASKIPSPKKKAK 236
Score = 40.0 bits (92), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 27/41 (65%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESL 648
E+++E+F K+GEIE + DP + + +G FI FK+ E +
Sbjct: 157 EKIREYFGKFGEIEAIEFSLDPESNKRQGSVFIAFKEEEPV 197
>gi|383857431|ref|XP_003704208.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 27C-like
[Megachile rotundata]
Length = 443
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 106/206 (51%), Gaps = 19/206 (9%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + T+E L+ +F +YGE+ + + + +GRSRGF F+ F D A+V V+
Sbjct: 19 GLSWETTQENLQRYFGRYGEVIDCVVMKNSESGRSRGFGFVTFSD-----PANVPLVLQN 73
Query: 166 GNHVINNKKIEAK--------KAKAKSG--KIFVGGLSPEMKDEEIKAHFAQFGNIIETE 215
G H ++ + I+ K K K G K+F+GGL + + +++ F ++G ++E
Sbjct: 74 GPHQLDGRTIDPKPCNPRTQQKPKRSGGFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVV 133
Query: 216 MPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGVRGGRGG 275
+ YD+ K + + F F++FE E V + +N K+V++K+A P+ + G
Sbjct: 134 IMYDQEKKKSRGFGFLSFEDEDAVDRCVAEHFVNLNGKQVEIKRAEPRDSSSKMNDSHQG 193
Query: 276 RGGRGGRGGR---MAGGYGGYGGYGG 298
+ G +GG MAG G GG G
Sbjct: 194 QWGPPQQGGPPMGMAGNMGPMGGPNG 219
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 50/90 (55%)
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
+++ + + GK+FVGGLS E E ++ +F ++G +I+ + + + + F F+TF
Sbjct: 2 RVKTEMDDDEKGKLFVGGLSWETTQENLQRYFGRYGEVIDCVVMKNSESGRSRGFGFVTF 61
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ V +L+N +++ + +D K P+
Sbjct: 62 SDPANVPLVLQNGPHQLDGRTIDPKPCNPR 91
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 26/41 (63%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESL 648
E L+ +F +YGE+ + + + +GRSRGF F+ F D ++
Sbjct: 27 ENLQRYFGRYGEVIDCVVMKNSESGRSRGFGFVTFSDPANV 67
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 46/93 (49%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGV 503
+++E + YD+ K + + F F++FE E V + +N K+V++K+A P+ +
Sbjct: 128 KVMEVVIMYDQEKKKSRGFGFLSFEDEDAVDRCVAEHFVNLNGKQVEIKRAEPRDSSSKM 187
Query: 504 RGGRGGRGGRGGRGGRMAGGYGGYGGYGGGYGE 536
G+ G +GG G G G GG G+
Sbjct: 188 NDSHQGQWGPPQQGGPPMGMAGNMGPMGGPNGQ 220
Score = 40.4 bits (93), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 601 GIVDKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVE 654
G+ +TE +L+ F++YG++ V + D +SRGF F+ F+D +++++ E
Sbjct: 109 GLPSNVTETDLRTFFNRYGKVMEVVIMYDQEKKKSRGFGFLSFEDEDAVDRCVAE 163
>gi|313232764|emb|CBY19435.1| unnamed protein product [Oikopleura dioica]
Length = 489
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 85/157 (54%), Gaps = 10/157 (6%)
Query: 112 ITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVIN 171
TE L+E+FS YG I+ +K DP +G SRGF FIVF+ T SV++VI H I+
Sbjct: 188 TTERLQEYFSAYGPIKYCQVKVDPESGESRGFGFIVFESTH-----SVDNVIKNLPHSID 242
Query: 172 NKKIEAKKA--KAKSG--KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKN 227
K+++AK+ K K+G K+F GG+ + D ++ F +G + E P D S K
Sbjct: 243 GKRVDAKRQHLKTKNGDDKLFCGGVPSDFSDGQLADFFTTYGMVDAVERPRDMSTGMPKG 302
Query: 228 FCFITFEHESVVIDLLKNPKQKI-NDKEVDVKKATPK 263
F FITF+ +V ++ + N ++ K A P+
Sbjct: 303 FAFITFKDPGIVAKIVTQRWLTLPNGARIECKAAVPQ 339
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 31/44 (70%)
Query: 606 ITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLE 649
TE L+E+FS YG I+ +K DP +G SRGF FIVF+ T S++
Sbjct: 188 TTERLQEYFSAYGPIKYCQVKVDPESGESRGFGFIVFESTHSVD 231
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 39/74 (52%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
KIFVGGL E ++ +F+ +G I ++ D + + F FI FE V +++KN
Sbjct: 177 KIFVGGLDRTTTTERLQEYFSAYGPIKYCQVKVDPESGESRGFGFIVFESTHSVDNVIKN 236
Query: 246 PKQKINDKEVDVKK 259
I+ K VD K+
Sbjct: 237 LPHSIDGKRVDAKR 250
>gi|149053819|gb|EDM05636.1| similar to RNA-binding protein Musashi2-S (predicted), isoform
CRA_a [Rattus norvegicus]
Length = 296
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/149 (38%), Positives = 86/149 (57%), Gaps = 16/149 (10%)
Query: 134 DPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNKKIEAK---------KAKAKS 184
DP T RSRGF F+ F D ASV+ V+ + +H +++K I+ K K ++
Sbjct: 5 DPTTKRSRGFGFVTFAD-----PASVDKVLGQPHHELDSKTIDPKVAFPRRAQPKMVTRT 59
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
KIFVGGLS E++K +F QFG + + + +DK+ ++ + F F+TFE+E VV + +
Sbjct: 60 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 119
Query: 245 NPKQKINDKEVDVKKATPKPE--PFGVRG 271
+IN+K V+ KKA PK P G RG
Sbjct: 120 IHFHEINNKMVECKKAQPKEVMFPPGTRG 148
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 68/133 (51%), Gaps = 19/133 (14%)
Query: 58 SFSENCLLEDSIGKPLTVSCSHHYYLFDQILRTHFFYIMEAKNKMVSHPGIV-------H 110
+F++ ++ +G+P H+ L + + + A+ KMV+ + +
Sbjct: 18 TFADPASVDKVLGQP-------HHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSAN 70
Query: 111 KITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVI 170
+ E++K++F ++G++E+ L D T R RGF F+ F++ + +EK V H I
Sbjct: 71 TVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEK-----VCEIHFHEI 125
Query: 171 NNKKIEAKKAKAK 183
NNK +E KKA+ K
Sbjct: 126 NNKMVECKKAQPK 138
Score = 47.4 bits (111), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 61/115 (53%), Gaps = 16/115 (13%)
Query: 552 SFSENCLLEDSIGKPLTVSCSHYHYLFDQNLRTHYFYIVEAKNKMVSHPGIV-------D 604
+F++ ++ +G+P +H L + + + A+ KMV+ + +
Sbjct: 18 TFADPASVDKVLGQP-------HHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSAN 70
Query: 605 KITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFY 659
+ E++K++F ++G++E+ L D T R RGF F+ F++ + +EK V +++F+
Sbjct: 71 TVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEK--VCEIHFH 123
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 35/56 (62%), Gaps = 2/56 (3%)
Query: 452 YDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE--PFGVRG 505
+DK+ ++ + F F+TFE+E VV + + +IN+K V+ KKA PK P G RG
Sbjct: 93 FDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMFPPGTRG 148
>gi|444509540|gb|ELV09335.1| DAZ-associated protein 1, partial [Tupaia chinensis]
Length = 391
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 83/151 (54%), Gaps = 6/151 (3%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
E L+ +FS+YGE+ + + D T +SRGF F+ FKD V V+A H ++ +
Sbjct: 14 ETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNC-----VGTVLASRPHTLDGR 68
Query: 174 KIEAKKA-KAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFIT 232
+ ++ +KS KIFVGG+ + E++ +F +FG + E M YD K + + F FIT
Sbjct: 69 NQKGPRSDNSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFIT 128
Query: 233 FEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
FE E V + I K+V+VK+A P+
Sbjct: 129 FEDEQSVDQAVNMHFHDIMGKKVEVKRAEPR 159
Score = 43.9 bits (102), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 37/60 (61%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+FVGGL E ++++F+Q+G +++ + DK+ +Q + F F+ F+ + V +L +
Sbjct: 1 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 60
Score = 42.7 bits (99), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 28/43 (65%)
Query: 609 ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
EL+E+F K+G + V + D R RGF FI F+D +S+++A
Sbjct: 96 ELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQA 138
Score = 42.0 bits (97), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 25/37 (67%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKD 644
E L+ +FS+YGE+ + + D T +SRGF F+ FKD
Sbjct: 14 ETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKD 50
>gi|405977263|gb|EKC41722.1| Heterogeneous nuclear ribonucleoprotein A2-like protein 1
[Crassostrea gigas]
Length = 363
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 97/171 (56%), Gaps = 17/171 (9%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ ++ T+ LK +F K+G I + + +DP T RSRGF FI ++ A +++ A
Sbjct: 48 GLSYETTDSTLKSYFEKWGTITDCVVMTDPQTKRSRGFGFITYEKV-----AMLDECQAN 102
Query: 166 GNHVINNKKIEAKKA--KAKSG---------KIFVGGLSPEMKDEEIKAHFAQFGNIIET 214
H I+ +++E K+A + +SG K+FVGGL +++++ F ++GNI
Sbjct: 103 RPHKIDGREVETKRAMPREESGRSESQKSNEKMFVGGLRDTTTEDDVREAFQEYGNIKNI 162
Query: 215 EMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE 265
E+ DK+ ++ + FCF+TF+ V + + KI DK+V+VKKA K E
Sbjct: 163 ELIKDKATNKTRGFCFVTFDDYDPVDKCVLKKRFKICDKDVEVKKAENKNE 213
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 48/80 (60%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+F+GGLS E D +K++F ++G I + + D + + F FIT+E +++ + N
Sbjct: 43 KLFIGGLSYETTDSTLKSYFEKWGTITDCVVMTDPQTKRSRGFGFITYEKVAMLDECQAN 102
Query: 246 PKQKINDKEVDVKKATPKPE 265
KI+ +EV+ K+A P+ E
Sbjct: 103 RPHKIDGREVETKRAMPREE 122
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
G+ D TE+ ++E F +YG I+N+ L D T ++RGF F+ F D + ++K
Sbjct: 139 GLRDTTTEDDVREAFQEYGNIKNIELIKDKATNKTRGFCFVTFDDYDPVDKC 190
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 26/44 (59%)
Query: 610 LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASV 653
LK +F K+G I + + +DP T RSRGF FI ++ L++
Sbjct: 58 LKSYFEKWGTITDCVVMTDPQTKRSRGFGFITYEKVAMLDECQA 101
>gi|426374423|ref|XP_004054073.1| PREDICTED: RNA-binding protein Musashi homolog 1, partial [Gorilla
gorilla gorilla]
Length = 303
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/139 (37%), Positives = 81/139 (58%), Gaps = 14/139 (10%)
Query: 134 DPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNKKIEAK---------KAKAKS 184
DP T RSRGF F+ F D +A V+ V+A+ H +++K I+ K K ++
Sbjct: 6 DPLTKRSRGFGFVTFMD-----QAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVTRT 60
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
KIFVGGLS E++K +F QFG + + + +DK+ ++ + F F+TFE E +V + +
Sbjct: 61 KKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 120
Query: 245 NPKQKINDKEVDVKKATPK 263
+IN+K V+ KKA PK
Sbjct: 121 IHFHEINNKMVECKKAQPK 139
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 44/75 (58%), Gaps = 5/75 (6%)
Query: 109 VHKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNH 168
V+ E++K++F ++G++++ L D T R RGF F+ F+ + +EK V H
Sbjct: 70 VNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEK-----VCEIHFH 124
Query: 169 VINNKKIEAKKAKAK 183
INNK +E KKA+ K
Sbjct: 125 EINNKMVECKKAQPK 139
Score = 43.1 bits (100), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 37/57 (64%), Gaps = 2/57 (3%)
Query: 603 VDKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFY 659
V+ E++K++F ++G++++ L D T R RGF F+ F+ + +EK V +++F+
Sbjct: 70 VNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEK--VCEIHFH 124
Score = 39.7 bits (91), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 30/46 (65%)
Query: 452 YDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 497
+DK+ ++ + F F+TFE E +V + + +IN+K V+ KKA PK
Sbjct: 94 FDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPK 139
>gi|358339324|dbj|GAA47410.1| RNA-binding protein Musashi [Clonorchis sinensis]
Length = 957
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 89/154 (57%), Gaps = 12/154 (7%)
Query: 116 LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNKKI 175
L+ +FS++GE+++ + D TGRSRGF ++ +++ ES+ A + H+++ K++
Sbjct: 26 LRLYFSRFGEVDDAVVMMDNKTGRSRGFGYVKYREPESVTLA-----LEAKPHILDGKEV 80
Query: 176 EAKKAKA-------KSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNF 228
+AK+ +S K+FVGG+ + E IK +F QFG + + + D +K + + F
Sbjct: 81 DAKQCNVNMKGRNRRSLKVFVGGIGLDQDAESIKNYFRQFGRVTDVNLMMDSNKQRHRGF 140
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKATP 262
F+ FE E+VV L+ +N+K+V++K P
Sbjct: 141 AFVGFEDEAVVKRLISLHYVTMNNKQVEIKAMEP 174
Score = 46.2 bits (108), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 39/65 (60%), Gaps = 5/65 (7%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
E +K +F ++G + +V L D N R RGFAF+ F+D +A V+ +I+ +NNK
Sbjct: 111 ESIKNYFRQFGRVTDVNLMMDSNKQRHRGFAFVGFED-----EAVVKRLISLHYVTMNNK 165
Query: 174 KIEAK 178
++E K
Sbjct: 166 QVEIK 170
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF-EHESVVIDLL 243
GK+FVGGLS + ++ +F++FG + + + D + + F ++ + E ESV + L
Sbjct: 10 GKLFVGGLSQATNNGSLRLYFSRFGEVDDAVVMMDNKTGRSRGFGYVKYREPESVTLALE 69
Query: 244 KNPKQKINDKEVDVKK 259
P ++ KEVD K+
Sbjct: 70 AKP-HILDGKEVDAKQ 84
Score = 42.0 bits (97), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 27/42 (64%)
Query: 603 VDKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKD 644
+D+ E +K +F ++G + +V L D N R RGFAF+ F+D
Sbjct: 106 LDQDAESIKNYFRQFGRVTDVNLMMDSNKQRHRGFAFVGFED 147
Score = 42.0 bits (97), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 30/42 (71%)
Query: 610 LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
L+ +FS++GE+++ + D TGRSRGF ++ +++ ES+ A
Sbjct: 26 LRLYFSRFGEVDDAVVMMDNKTGRSRGFGYVKYREPESVTLA 67
>gi|431914268|gb|ELK15526.1| RNA-binding protein Musashi like protein 1 [Pteropus alecto]
Length = 281
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/139 (37%), Positives = 81/139 (58%), Gaps = 14/139 (10%)
Query: 134 DPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNKKIEAK---------KAKAKS 184
DP T RSRGF F+ F D +A V+ V+A+ H +++K I+ K K ++
Sbjct: 3 DPLTKRSRGFGFVTFMD-----QAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVTRT 57
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
KIFVGGLS E++K +F QFG + + + +DK+ ++ + F F+TFE E +V + +
Sbjct: 58 KKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 117
Query: 245 NPKQKINDKEVDVKKATPK 263
+IN+K V+ KKA PK
Sbjct: 118 IHFHEINNKMVECKKAQPK 136
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 44/75 (58%), Gaps = 5/75 (6%)
Query: 109 VHKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNH 168
V+ E++K++F ++G++++ L D T R RGF F+ F+ + +EK V H
Sbjct: 67 VNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEK-----VCEIHFH 121
Query: 169 VINNKKIEAKKAKAK 183
INNK +E KKA+ K
Sbjct: 122 EINNKMVECKKAQPK 136
Score = 43.1 bits (100), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 37/57 (64%), Gaps = 2/57 (3%)
Query: 603 VDKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFY 659
V+ E++K++F ++G++++ L D T R RGF F+ F+ + +EK V +++F+
Sbjct: 67 VNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEK--VCEIHFH 121
Score = 40.0 bits (92), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 30/46 (65%)
Query: 452 YDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 497
+DK+ ++ + F F+TFE E +V + + +IN+K V+ KKA PK
Sbjct: 91 FDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPK 136
>gi|332019507|gb|EGI59986.1| Heterogeneous nuclear ribonucleoprotein 27C [Acromyrmex echinatior]
Length = 340
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 105/200 (52%), Gaps = 16/200 (8%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + T+E L+ +F +YGE+ + + + +GRSRGF F+ F D A+V V+
Sbjct: 6 GLSWETTQENLQRYFGRYGEVIDCVVMKNSESGRSRGFGFVTFSD-----PANVSLVLQN 60
Query: 166 GNHVINNKKIEAK--------KAKAKSG--KIFVGGLSPEMKDEEIKAHFAQFGNIIETE 215
G H ++ + I+ K K K G K+F+GGL + + +++++F +FG ++E
Sbjct: 61 GPHQLDGRTIDPKPCNPRTLQKPKRSGGFPKVFLGGLPSNVTETDLRSYFTRFGKVMEVV 120
Query: 216 MPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGVRGGRGG 275
+ YD+ K + + F F++FE E V + +N K+V++K+A + G+ G
Sbjct: 121 IMYDQEKKKSRGFGFLSFEDEEAVDRCVAEHFVNLNGKQVEIKRAESSSKMNDSHQGQWG 180
Query: 276 RGGRGGRGGRMAGGYGGYGG 295
+GG MAG G GG
Sbjct: 181 PPQQGGPPMGMAGNMGPMGG 200
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 44/78 (56%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+FVGGLS E E ++ +F ++G +I+ + + + + F F+TF + V +L+N
Sbjct: 1 KLFVGGLSWETTQENLQRYFGRYGEVIDCVVMKNSESGRSRGFGFVTFSDPANVSLVLQN 60
Query: 246 PKQKINDKEVDVKKATPK 263
+++ + +D K P+
Sbjct: 61 GPHQLDGRTIDPKPCNPR 78
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Query: 601 GIVDKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVE 654
G+ +TE +L+ +F+++G++ V + D +SRGF F+ F+D E++++ E
Sbjct: 96 GLPSNVTETDLRSYFTRFGKVMEVVIMYDQEKKKSRGFGFLSFEDEEAVDRCVAE 150
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 27/45 (60%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESL 648
+ E L+ +F +YGE+ + + + +GRSRGF F+ F D ++
Sbjct: 10 ETTQENLQRYFGRYGEVIDCVVMKNSESGRSRGFGFVTFSDPANV 54
>gi|212276326|ref|NP_001130962.1| Ribonucleoprotein like protein isoform 1 [Zea mays]
gi|194690564|gb|ACF79366.1| unknown [Zea mays]
gi|195616124|gb|ACG29892.1| ribonucleoprotein like protein [Zea mays]
gi|224030751|gb|ACN34451.1| unknown [Zea mays]
gi|414592149|tpg|DAA42720.1| TPA: Ribonucleoprotein like protein isoform 1 [Zea mays]
gi|414592150|tpg|DAA42721.1| TPA: Ribonucleoprotein like protein isoform 2 [Zea mays]
Length = 370
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 107/244 (43%), Gaps = 54/244 (22%)
Query: 115 ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNKK 174
+L+ HF+++GE+ +V + D TG RGF F+ F+D + A+ H + +
Sbjct: 23 DLRAHFARFGEVRSVVVMRDRETGHGRGFGFVEFEDKAAAAAAAALGDADRPRHFLCGRA 82
Query: 175 IEAKKAKAK--------------------------------------------SGKIFVG 190
++ K+A+A+ S K+FVG
Sbjct: 83 VDVKRARARAPRNQREQHSQPHQVEQGLDQGNQDNQYPMGNGTADSGDNVNYGSKKVFVG 142
Query: 191 GLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKI 250
GL + +EE +A+F FG + + + YD + ++ + F F+TF+ E V +++ +
Sbjct: 143 GLQDDTTEEEFRAYFETFGTVTDVAVIYDSATNRSRGFGFVTFDSEEAVGKVMRQSFHDL 202
Query: 251 NDKEVDVKKATPKPEPFGVRGGRGGRGGRGGRGGRMAGGYGG------YGGYGGGYGGIL 304
N +V+ K A PK E + GRG R GGR+ GY G Y G Y G +
Sbjct: 203 NGTKVEAKIAIPKDEQYYRNRGRGARSS----GGRVPAGYEGSMYQPPYNAGYGSYNGYM 258
Query: 305 YKPL 308
+P+
Sbjct: 259 PQPV 262
Score = 47.8 bits (112), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 5/75 (6%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
EE + +F +G + +V + D T RSRGF F+ F E++ K V+ + H +N
Sbjct: 151 EEFRAYFETFGTVTDVAVIYDSATNRSRGFGFVTFDSEEAVGK-----VMRQSFHDLNGT 205
Query: 174 KIEAKKAKAKSGKIF 188
K+EAK A K + +
Sbjct: 206 KVEAKIAIPKDEQYY 220
Score = 47.0 bits (110), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 46/87 (52%), Gaps = 5/87 (5%)
Query: 182 AKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHE----- 236
A+S K+FVGG+ ++ +++AHFA+FG + + D+ + F F+ FE +
Sbjct: 5 AESRKLFVGGIPAGAQEADLRAHFARFGEVRSVVVMRDRETGHGRGFGFVEFEDKAAAAA 64
Query: 237 SVVIDLLKNPKQKINDKEVDVKKATPK 263
+ + P+ + + VDVK+A +
Sbjct: 65 AAALGDADRPRHFLCGRAVDVKRARAR 91
Score = 46.6 bits (109), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 46/98 (46%), Gaps = 14/98 (14%)
Query: 445 IIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGVR 504
+ + + YD + ++ + F F+TF+ E V +++ +N +V+ K A PK E +
Sbjct: 163 VTDVAVIYDSATNRSRGFGFVTFDSEEAVGKVMRQSFHDLNGTKVEAKIAIPKDEQYYRN 222
Query: 505 GGRGGRGGRGGRGGRMAGGY----------GGYGGYGG 532
GRG R GGR+ GY GYG Y G
Sbjct: 223 RGRGARSS----GGRVPAGYEGSMYQPPYNAGYGSYNG 256
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 25/36 (69%)
Query: 609 ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKD 644
+L+ HF+++GE+ +V + D TG RGF F+ F+D
Sbjct: 23 DLRAHFARFGEVRSVVVMRDRETGHGRGFGFVEFED 58
Score = 40.4 bits (93), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 26/47 (55%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D EE + +F +G + +V + D T RSRGF F+ F E++ K
Sbjct: 147 DTTEEEFRAYFETFGTVTDVAVIYDSATNRSRGFGFVTFDSEEAVGK 193
>gi|30682550|ref|NP_851001.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|17065240|gb|AAL32774.1| Unknown protein [Arabidopsis thaliana]
gi|20260060|gb|AAM13377.1| unknown protein [Arabidopsis thaliana]
gi|332641793|gb|AEE75314.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 231
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/150 (36%), Positives = 83/150 (55%), Gaps = 19/150 (12%)
Query: 107 GIVHKITEE--LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIA 164
G +HK T +HF KYGEI + + D +TG+ RGF FI F D SV D +
Sbjct: 24 GGLHKDTTNTVFNKHFGKYGEITDSVIMRDRHTGQPRGFGFITFAD------PSVVDKVI 77
Query: 165 EGNHVINNKKIEAKKA-----------KAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIE 213
E HVIN K++E K+ K+ KIFVGG+ + ++E+K FA++GN++E
Sbjct: 78 EDTHVINGKQVEIKRTIPKGAGGNQSKDIKTKKIFVGGIPSTVTEDELKDFFAKYGNVVE 137
Query: 214 TEMPYDKSKSQRKNFCFITFEHESVVIDLL 243
++ D ++ + F F+ F+ E VV +LL
Sbjct: 138 HQVIRDHETNRSRGFGFVIFDSEEVVDELL 167
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Query: 182 AKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVID 241
A GKIF+GGL + + HF ++G I ++ + D+ Q + F FITF SVV
Sbjct: 16 ASPGKIFIGGLHKDTTNTVFNKHFGKYGEITDSVIMRDRHTGQPRGFGFITFADPSVVDK 75
Query: 242 LLKNPKQKINDKEVDVKKATPK 263
++++ IN K+V++K+ PK
Sbjct: 76 VIEDT-HVINGKQVEIKRTIPK 96
Score = 43.5 bits (101), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVY 657
D +HF KYGEI + + D +TG+ RGF FI F D ++K +ED +
Sbjct: 29 DTTNTVFNKHFGKYGEITDSVIMRDRHTGQPRGFGFITFADPSVVDKV-IEDTH 81
Score = 42.4 bits (98), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 591 EAKNKMVSHPGIVDKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLE 649
+ K K + GI +TE ELK+ F+KYG + + D T RSRGF F++F E ++
Sbjct: 105 DIKTKKIFVGGIPSTVTEDELKDFFAKYGNVVEHQVIRDHETNRSRGFGFVIFDSEEVVD 164
Query: 650 K 650
+
Sbjct: 165 E 165
>gi|148683899|gb|EDL15846.1| Musashi homolog 2 (Drosophila), isoform CRA_a [Mus musculus]
Length = 296
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/149 (38%), Positives = 86/149 (57%), Gaps = 16/149 (10%)
Query: 134 DPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNKKIEAK---------KAKAKS 184
DP T RSRGF F+ F D ASV+ V+ + +H +++K I+ K K ++
Sbjct: 5 DPTTKRSRGFGFVTFAD-----PASVDKVLGQPHHELDSKTIDPKVAFPRRAQPKMVTRT 59
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
KIFVGGLS E++K +F QFG + + + +DK+ ++ + F F+TFE+E VV + +
Sbjct: 60 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 119
Query: 245 NPKQKINDKEVDVKKATPKPE--PFGVRG 271
+IN+K V+ KKA PK P G RG
Sbjct: 120 IHFHEINNKMVECKKAQPKEVMFPPGTRG 148
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 68/133 (51%), Gaps = 19/133 (14%)
Query: 58 SFSENCLLEDSIGKPLTVSCSHHYYLFDQILRTHFFYIMEAKNKMVSHPGIV-------H 110
+F++ ++ +G+P H+ L + + + A+ KMV+ + +
Sbjct: 18 TFADPASVDKVLGQP-------HHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSAN 70
Query: 111 KITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVI 170
+ E++K++F ++G++E+ L D T R RGF F+ F++ + +EK V H I
Sbjct: 71 TVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEK-----VCEIHFHEI 125
Query: 171 NNKKIEAKKAKAK 183
NNK +E KKA+ K
Sbjct: 126 NNKMVECKKAQPK 138
Score = 47.4 bits (111), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 61/115 (53%), Gaps = 16/115 (13%)
Query: 552 SFSENCLLEDSIGKPLTVSCSHYHYLFDQNLRTHYFYIVEAKNKMVSHPGIV-------D 604
+F++ ++ +G+P +H L + + + A+ KMV+ + +
Sbjct: 18 TFADPASVDKVLGQP-------HHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSAN 70
Query: 605 KITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFY 659
+ E++K++F ++G++E+ L D T R RGF F+ F++ + +EK V +++F+
Sbjct: 71 TVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEK--VCEIHFH 123
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 35/56 (62%), Gaps = 2/56 (3%)
Query: 452 YDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE--PFGVRG 505
+DK+ ++ + F F+TFE+E VV + + +IN+K V+ KKA PK P G RG
Sbjct: 93 FDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMFPPGTRG 148
>gi|350015551|dbj|GAA42894.1| heterogeneous nuclear ribonucleoproteins A2/B1 [Clonorchis
sinensis]
Length = 292
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 95/175 (54%), Gaps = 16/175 (9%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ K EE L+ ++S++GEI +V + DP + +SRGF F+ FK+ S++KA A
Sbjct: 19 GLNPKTNEESLRSYYSQWGEITDVVVMKDPRSNKSRGFGFVTFKEAASVDKAQ-----AN 73
Query: 166 GNHVINNKKIEAKKA----------KAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETE 215
H ++ K++++K+A A KIFVGGL ++ ++++ +F Q+G + + +
Sbjct: 74 RPHKLDGKEVDSKRAMPREETSPEVHAAVKKIFVGGLKKDVTNDDLAEYFGQYGTVTDAQ 133
Query: 216 MPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGVR 270
+ K + + F F+TF+ V ++ IN + DV+KA + E VR
Sbjct: 134 IVMAKDTNTSRGFAFVTFDDTDSVDKVILARPHTINGHKADVRKALSREEMNKVR 188
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 50/80 (62%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+FVGGL+P+ +E ++++++Q+G I + + D ++ + F F+TF+ + V N
Sbjct: 14 KLFVGGLNPKTNEESLRSYYSQWGEITDVVVMKDPRSNKSRGFGFVTFKEAASVDKAQAN 73
Query: 246 PKQKINDKEVDVKKATPKPE 265
K++ KEVD K+A P+ E
Sbjct: 74 RPHKLDGKEVDSKRAMPREE 93
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASV 653
G+ K EE L+ ++S++GEI +V + DP + +SRGF F+ FK+ S++KA
Sbjct: 19 GLNPKTNEESLRSYYSQWGEITDVVVMKDPRSNKSRGFGFVTFKEAASVDKAQA 72
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 30/47 (63%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D ++L E+F +YG + + + +T SRGFAF+ F DT+S++K
Sbjct: 113 DVTNDDLAEYFGQYGTVTDAQIVMAKDTNTSRGFAFVTFDDTDSVDK 159
>gi|427777107|gb|JAA54005.1| Putative heteroproteinous nuclear ribonucleoprotein at 27c
[Rhipicephalus pulchellus]
Length = 322
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 108/232 (46%), Gaps = 48/232 (20%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + T+E L +FS++GE+ + + + TGRSRGF F+ F+D + V V+A
Sbjct: 16 GLSWETTQESLLNYFSRFGEVVDSVVMCN-ETGRSRGFGFVTFRD-----PSCVATVLAG 69
Query: 166 GNHVINNKKIEAKKAKAKSG--------------------------KIFVGGLSPEMKDE 199
G H ++ + ++ K +S KIFVGGL + +
Sbjct: 70 GPHQLDGRTVDPKSCNPRSASRPGGGGGPGARGGPRGGGGGKGSTTKIFVGGLPATVTET 129
Query: 200 EIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKK 259
++ A F+++G + E + YD+ + + + F F++FE E V L +I+ K+V+ K+
Sbjct: 130 DLHAFFSEYGKVTEVLIMYDQEQRRSRGFGFVSFETEDAVNQLTSRRYVEISGKQVECKR 189
Query: 260 ATPKPEPFGVRGGR---------------GGRGGRGGRGGRMAGGYGGYGGY 296
A PK +GGR G G G G M GY GYGGY
Sbjct: 190 AEPKESRMANKGGRPGGGGGWGGQQQQQQWGWGSSNGAGNNMNTGYQGYGGY 241
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
Query: 177 AKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHE 236
A++ + GKIFVGGLS E E + +F++FG ++++ + +++ R F F+TF
Sbjct: 2 ARRDNEEQGKIFVGGLSWETTQESLLNYFSRFGEVVDSVVMCNETGRSR-GFGFVTFRDP 60
Query: 237 SVVIDLLKNPKQKINDKEVDVKKATPK 263
S V +L +++ + VD K P+
Sbjct: 61 SCVATVLAGGPHQLDGRTVDPKSCNPR 87
Score = 45.4 bits (106), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 47/102 (46%), Gaps = 15/102 (14%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGV 503
++ E + YD+ + + + F F++FE E V L +I+ K+V+ K+A PK
Sbjct: 140 KVTEVLIMYDQEQRRSRGFGFVSFETEDAVNQLTSRRYVEISGKQVECKRAEPKESRMAN 199
Query: 504 RGGR---------------GGRGGRGGRGGRMAGGYGGYGGY 530
+GGR G G G G M GY GYGGY
Sbjct: 200 KGGRPGGGGGWGGQQQQQQWGWGSSNGAGNNMNTGYQGYGGY 241
>gi|293336929|ref|NP_001168878.1| uncharacterized protein LOC100382683 [Zea mays]
gi|223973459|gb|ACN30917.1| unknown [Zea mays]
gi|414871120|tpg|DAA49677.1| TPA: hypothetical protein ZEAMMB73_860016 [Zea mays]
Length = 443
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 96/193 (49%), Gaps = 25/193 (12%)
Query: 96 MEAKNKMVSHPGIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESL 154
ME+ + GI + TEE L EHFS YGE+ + D TGR RGF F+VF D +
Sbjct: 1 MESDQGKLFIGGISWETTEEKLSEHFSAYGEVTQAAVMRDKTTGRPRGFGFVVFADPAVV 60
Query: 155 EKASVEDVIAEGNHV-----INNKKIEAKKAK-------------------AKSGKIFVG 190
++A + +G V ++ ++ +A KA A++ KIFVG
Sbjct: 61 DRALQDPHTLDGRTVDVKRALSREEQQASKAANPSGGRNTGGGNGGGDANGARTKKIFVG 120
Query: 191 GLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKI 250
GL + ++ + +F FG + + + YD++ + + F FITF+ E V +L+ +
Sbjct: 121 GLPSTLTEDGFRQYFQTFGIVTDVVVMYDQNTQRPRGFGFITFDSEDAVDHVLQKTFHDL 180
Query: 251 NDKEVDVKKATPK 263
K V+VK+A P+
Sbjct: 181 GGKLVEVKRALPR 193
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
GI + TEE L EHFS YGE+ + D TGR RGF F+VF D +++A
Sbjct: 12 GISWETTEEKLSEHFSAYGEVTQAAVMRDKTTGRPRGFGFVVFADPAVVDRA 63
>gi|395327711|gb|EJF60108.1| hypothetical protein DICSQDRAFT_63556 [Dichomitus squalens LYAD-421
SS1]
Length = 180
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 92/160 (57%), Gaps = 14/160 (8%)
Query: 116 LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNKKI 175
L+++FS++GE+E+ T+ D + GRSRGFAF+ FKD ASV V+ H+++ K I
Sbjct: 24 LRKYFSEFGEVEDCTILRDQD-GRSRGFAFLTFKD-----PASVNAVMCR-EHILDGKTI 76
Query: 176 EAKKA-----KAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCF 230
+ K+A ++ + FVGGLS + ++A F+Q+G +++ + D+ + K F F
Sbjct: 77 DPKRAIPREEHLRNTRYFVGGLSHSTTSDSMRAFFSQYGKVVDCTVMVDRESGRSKGFGF 136
Query: 231 ITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGVR 270
+TFE S L+ P ++DK+ V+K + + VR
Sbjct: 137 VTFEDASNTDQLVGQPNLILDDKQ--VRKTSLLSRSYTVR 174
Score = 46.6 bits (109), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 47/79 (59%), Gaps = 6/79 (7%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ H T + ++ FS+YG++ + T+ D +GRS+GF F+ F+D ++ + ++ +
Sbjct: 97 GLSHSTTSDSMRAFFSQYGKVVDCTVMVDRESGRSKGFGFVTFEDA-----SNTDQLVGQ 151
Query: 166 GNHVINNKKIEAKKAKAKS 184
N ++++K++ ++S
Sbjct: 152 PNLILDDKQVRKTSLLSRS 170
Score = 46.2 bits (108), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 33/45 (73%), Gaps = 1/45 (2%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESL 648
D + L+++FS++GE+E+ T+ D + GRSRGFAF+ FKD S+
Sbjct: 18 DTTDDGLRKYFSEFGEVEDCTILRDQD-GRSRGFAFLTFKDPASV 61
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 47/80 (58%), Gaps = 2/80 (2%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+FVGGLS + D+ ++ +F++FG + + + D+ R F F+TF+ + ++ +
Sbjct: 9 KMFVGGLSWDTTDDGLRKYFSEFGEVEDCTILRDQDGRSR-GFAFLTFK-DPASVNAVMC 66
Query: 246 PKQKINDKEVDVKKATPKPE 265
+ ++ K +D K+A P+ E
Sbjct: 67 REHILDGKTIDPKRAIPREE 86
Score = 40.0 bits (92), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 30/44 (68%)
Query: 607 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
++ ++ FS+YG++ + T+ D +GRS+GF F+ F+D + ++
Sbjct: 104 SDSMRAFFSQYGKVVDCTVMVDRESGRSKGFGFVTFEDASNTDQ 147
>gi|390608551|dbj|BAM21252.1| RRM-containing protein [Ephydatia fluviatilis]
Length = 431
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 93/168 (55%), Gaps = 19/168 (11%)
Query: 113 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINN 172
+E+L E+F+++GE+ + DP+T RSRGF FI FKD S+ K V + A+ V+++
Sbjct: 63 SEKLAEYFARFGEVLECNIMRDPSTRRSRGFGFITFKDPASVSK--VLETHAQEPIVLDD 120
Query: 173 KKIEAK-----------------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETE 215
K I+ K A +++ +IFVGGLS + + +++ +F +FG I + +
Sbjct: 121 KNIDPKIAVPPKRPGNKVMSPPWTAPSQTKRIFVGGLSSDSTEMDLQEYFQEFGTIQDVQ 180
Query: 216 MPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ YD++ S+ + F F+TF+ E + I K+V+VK A K
Sbjct: 181 LMYDRNTSRHRGFGFVTFDSEKPAEKVCSIQYHDIRGKKVEVKVAQSK 228
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 58/120 (48%), Gaps = 4/120 (3%)
Query: 151 TESLEKASVEDVIAEGNHVINNKKIEAKKA-KAKSGKIFVGGLSPEMKDEEIKAHFAQFG 209
T E E V G+H +K KIFVGGLS + E++ +FA+FG
Sbjct: 15 TSEREATPPEAVTENGSHSDGATSPTTPNGDTSKPTKIFVGGLSWQTSSEKLAEYFARFG 74
Query: 210 NIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQK---INDKEVDVKKATPKPEP 266
++E + D S + + F FITF+ + V +L+ Q+ ++DK +D K A P P
Sbjct: 75 EVLECNIMRDPSTRRSRGFGFITFKDPASVSKVLETHAQEPIVLDDKNIDPKIAVPPKRP 134
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 31/44 (70%)
Query: 607 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+E+L E+F+++GE+ + DP+T RSRGF FI FKD S+ K
Sbjct: 63 SEKLAEYFARFGEVLECNIMRDPSTRRSRGFGFITFKDPASVSK 106
Score = 43.5 bits (101), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 28/47 (59%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D +L+E+F ++G I++V L D NT R RGF F+ F + EK
Sbjct: 160 DSTEMDLQEYFQEFGTIQDVQLMYDRNTSRHRGFGFVTFDSEKPAEK 206
>gi|297829856|ref|XP_002882810.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
gi|297328650|gb|EFH59069.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
Length = 231
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 84/150 (56%), Gaps = 19/150 (12%)
Query: 107 GIVHKITEE--LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIA 164
G +HK T +HF KYGEI + + D +TG+ RGF FI F D SV D +
Sbjct: 24 GGLHKDTTNTVFNKHFGKYGEITDSVIMRDRHTGQPRGFGFITFAD------PSVVDKVI 77
Query: 165 EGNHVINNKKIEAKKA-----------KAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIE 213
E NH+IN K++E K+ K+ KIFVGG+ + ++E+K F+++GN++E
Sbjct: 78 EDNHIINGKQVEIKRTIPKGAGGNQSKDFKTKKIFVGGIPSTVTEDELKDFFSKYGNVVE 137
Query: 214 TEMPYDKSKSQRKNFCFITFEHESVVIDLL 243
++ D ++ + F F+ F+ E VV +LL
Sbjct: 138 HQVIRDHETNRSRGFGFVIFDSEEVVDELL 167
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Query: 182 AKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVID 241
A GKIF+GGL + + HF ++G I ++ + D+ Q + F FITF SVV
Sbjct: 16 ASPGKIFIGGLHKDTTNTVFNKHFGKYGEITDSVIMRDRHTGQPRGFGFITFADPSVVDK 75
Query: 242 LLKNPKQKINDKEVDVKKATPK 263
++++ IN K+V++K+ PK
Sbjct: 76 VIED-NHIINGKQVEIKRTIPK 96
Score = 43.1 bits (100), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVED 655
D +HF KYGEI + + D +TG+ RGF FI F D ++K +ED
Sbjct: 29 DTTNTVFNKHFGKYGEITDSVIMRDRHTGQPRGFGFITFADPSVVDKV-IED 79
Score = 43.1 bits (100), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 591 EAKNKMVSHPGIVDKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLE 649
+ K K + GI +TE ELK+ FSKYG + + D T RSRGF F++F E ++
Sbjct: 105 DFKTKKIFVGGIPSTVTEDELKDFFSKYGNVVEHQVIRDHETNRSRGFGFVIFDSEEVVD 164
Query: 650 K 650
+
Sbjct: 165 E 165
>gi|449533873|ref|XP_004173895.1| PREDICTED: nuclear polyadenylated RNA-binding protein 4-like,
partial [Cucumis sativus]
Length = 270
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 85/158 (53%), Gaps = 16/158 (10%)
Query: 113 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINN 172
+ + +HF YGEI + + D TG RGF F+ + D SV D + E H+IN
Sbjct: 19 SAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYAD------PSVVDKVIEDTHIING 72
Query: 173 KKIEAKKA---------KAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKS 223
K++E K+ K+ KIFVGG+ + ++E + F Q+G + E ++ D S S
Sbjct: 73 KQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGVVKEHQIMRDHSTS 132
Query: 224 QRKNFCFITFEHESVVIDLLKNPKQ-KINDKEVDVKKA 260
+ + F FITFE E V DLL N + ++ +V++KKA
Sbjct: 133 RSRGFGFITFETEQAVDDLLANGNRLEMAGSQVEIKKA 170
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
KIFVGGL E + HF +G I ++ + D+ + F F+T+ SVV ++++
Sbjct: 7 KIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIED 66
Query: 246 PKQKINDKEVDVKKATPK 263
IN K+V++K+ PK
Sbjct: 67 T-HIINGKQVEIKRTIPK 83
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 48/85 (56%), Gaps = 7/85 (8%)
Query: 99 KNKMVSHPGIVHKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 157
K K + GI + E E ++ F +YG ++ + D +T RSRGF FI F+ +
Sbjct: 92 KTKKIFVGGIPTSVDEDEFRDFFMQYGVVKEHQIMRDHSTSRSRGFGFITFETEQ----- 146
Query: 158 SVEDVIAEGNHV-INNKKIEAKKAK 181
+V+D++A GN + + ++E KKA+
Sbjct: 147 AVDDLLANGNRLEMAGSQVEIKKAE 171
>gi|392587380|gb|EIW76714.1| hypothetical protein CONPUDRAFT_63467, partial [Coniophora puteana
RWD-64-598 SS2]
Length = 165
Score = 94.0 bits (232), Expect = 2e-16, Method: Composition-based stats.
Identities = 49/153 (32%), Positives = 89/153 (58%), Gaps = 11/153 (7%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
E L+ +F+++G+++ T+ DP+ GRSRGFAF+ F D E +V V+A+ +H+++ K
Sbjct: 14 EGLRNYFAQFGKVDACTIMRDPD-GRSRGFAFLTFDDAE-----AVSAVVAKDHHILDGK 67
Query: 174 KIEAKKA-----KAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNF 228
I+ K+A ++ + FVGGLSP + ++A F+ FG +++ + D+ + K F
Sbjct: 68 AIDPKRAIPREEHLRNTRYFVGGLSPVTTADSMRAFFSAFGKVVDATVMVDRESGRSKGF 127
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKAT 261
F+TFE + ++DKEV V +++
Sbjct: 128 GFVTFEDAGNSASFVGKLGLVLDDKEVRVLRSS 160
Score = 49.3 bits (116), Expect = 0.007, Method: Composition-based stats.
Identities = 25/80 (31%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+F+GGL+ + DE ++ +FAQFG + + D R F F+TF+ V ++
Sbjct: 1 KMFIGGLNWDTTDEGLRNYFAQFGKVDACTIMRDPDGRSR-GFAFLTFDDAEAVSAVVAK 59
Query: 246 PKQKINDKEVDVKKATPKPE 265
++ K +D K+A P+ E
Sbjct: 60 DHHILDGKAIDPKRAIPREE 79
Score = 48.1 bits (113), Expect = 0.017, Method: Composition-based stats.
Identities = 20/52 (38%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVED 655
D E L+ +F+++G+++ T+ DP+ GRSRGFAF+ F D E++ +D
Sbjct: 10 DTTDEGLRNYFAQFGKVDACTIMRDPD-GRSRGFAFLTFDDAEAVSAVVAKD 60
>gi|194695198|gb|ACF81683.1| unknown [Zea mays]
gi|414592148|tpg|DAA42719.1| TPA: hypothetical protein ZEAMMB73_519506 [Zea mays]
Length = 313
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 107/244 (43%), Gaps = 54/244 (22%)
Query: 115 ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNKK 174
+L+ HF+++GE+ +V + D TG RGF F+ F+D + A+ H + +
Sbjct: 23 DLRAHFARFGEVRSVVVMRDRETGHGRGFGFVEFEDKAAAAAAAALGDADRPRHFLCGRA 82
Query: 175 IEAKKAKAK--------------------------------------------SGKIFVG 190
++ K+A+A+ S K+FVG
Sbjct: 83 VDVKRARARAPRNQREQHSQPHQVEQGLDQGNQDNQYPMGNGTADSGDNVNYGSKKVFVG 142
Query: 191 GLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKI 250
GL + +EE +A+F FG + + + YD + ++ + F F+TF+ E V +++ +
Sbjct: 143 GLQDDTTEEEFRAYFETFGTVTDVAVIYDSATNRSRGFGFVTFDSEEAVGKVMRQSFHDL 202
Query: 251 NDKEVDVKKATPKPEPFGVRGGRGGRGGRGGRGGRMAGGYGG------YGGYGGGYGGIL 304
N +V+ K A PK E + GRG R GGR+ GY G Y G Y G +
Sbjct: 203 NGTKVEAKIAIPKDEQYYRNRGRGARSS----GGRVPAGYEGSMYQPPYNAGYGSYNGYM 258
Query: 305 YKPL 308
+P+
Sbjct: 259 PQPV 262
Score = 47.8 bits (112), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 5/75 (6%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
EE + +F +G + +V + D T RSRGF F+ F E++ K V+ + H +N
Sbjct: 151 EEFRAYFETFGTVTDVAVIYDSATNRSRGFGFVTFDSEEAVGK-----VMRQSFHDLNGT 205
Query: 174 KIEAKKAKAKSGKIF 188
K+EAK A K + +
Sbjct: 206 KVEAKIAIPKDEQYY 220
Score = 46.6 bits (109), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 46/87 (52%), Gaps = 5/87 (5%)
Query: 182 AKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHE----- 236
A+S K+FVGG+ ++ +++AHFA+FG + + D+ + F F+ FE +
Sbjct: 5 AESRKLFVGGIPAGAQEADLRAHFARFGEVRSVVVMRDRETGHGRGFGFVEFEDKAAAAA 64
Query: 237 SVVIDLLKNPKQKINDKEVDVKKATPK 263
+ + P+ + + VDVK+A +
Sbjct: 65 AAALGDADRPRHFLCGRAVDVKRARAR 91
Score = 46.2 bits (108), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 46/98 (46%), Gaps = 14/98 (14%)
Query: 445 IIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGVR 504
+ + + YD + ++ + F F+TF+ E V +++ +N +V+ K A PK E +
Sbjct: 163 VTDVAVIYDSATNRSRGFGFVTFDSEEAVGKVMRQSFHDLNGTKVEAKIAIPKDEQYYRN 222
Query: 505 GGRGGRGGRGGRGGRMAGGY----------GGYGGYGG 532
GRG R GGR+ GY GYG Y G
Sbjct: 223 RGRGARSS----GGRVPAGYEGSMYQPPYNAGYGSYNG 256
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 25/36 (69%)
Query: 609 ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKD 644
+L+ HF+++GE+ +V + D TG RGF F+ F+D
Sbjct: 23 DLRAHFARFGEVRSVVVMRDRETGHGRGFGFVEFED 58
Score = 40.4 bits (93), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 26/47 (55%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D EE + +F +G + +V + D T RSRGF F+ F E++ K
Sbjct: 147 DTTEEEFRAYFETFGTVTDVAVIYDSATNRSRGFGFVTFDSEEAVGK 193
>gi|149063558|gb|EDM13881.1| rCG21724, isoform CRA_b [Rattus norvegicus]
Length = 262
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/174 (35%), Positives = 92/174 (52%), Gaps = 16/174 (9%)
Query: 134 DPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNKKIEAK---------KAKAKS 184
DP T RSRGF F+ F D +A V+ V+A+ H +++K I+ K K ++
Sbjct: 3 DPLTKRSRGFGFVTFMD-----QAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVTRT 57
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
KIFVGGLS E++K +F QFG + + + +DK+ ++ + F F+TFE E +V + +
Sbjct: 58 KKIFVGGLSVNTTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 117
Query: 245 NPKQKINDKEVDVKKATPKP--EPFGVRGGRGGRGGRGGRGGRMAGGYGGYGGY 296
+IN+K V+ KKA PK P G GR G + G GY G+
Sbjct: 118 IHFHEINNKMVECKKAQPKEVMSPTGSARGRSRVMPYGMDAFMLGIGMLGYPGF 171
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 43/75 (57%), Gaps = 5/75 (6%)
Query: 109 VHKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNH 168
V+ E++K +F ++G++++ L D T R RGF F+ F+ + +EK V H
Sbjct: 67 VNTTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEK-----VCEIHFH 121
Query: 169 VINNKKIEAKKAKAK 183
INNK +E KKA+ K
Sbjct: 122 EINNKMVECKKAQPK 136
Score = 42.0 bits (97), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Query: 603 VDKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFY 659
V+ E++K +F ++G++++ L D T R RGF F+ F+ + +EK V +++F+
Sbjct: 67 VNTTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEK--VCEIHFH 121
Score = 39.7 bits (91), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Query: 452 YDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKP--EPFGVRGGRGG 509
+DK+ ++ + F F+TFE E +V + + +IN+K V+ KKA PK P G GR
Sbjct: 91 FDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPKEVMSPTGSARGRSR 150
Query: 510 RGGRGGRGGRMAGGYGGYGGY 530
G + G GY G+
Sbjct: 151 VMPYGMDAFMLGIGMLGYPGF 171
>gi|363807276|ref|NP_001242362.1| uncharacterized protein LOC100793209 [Glycine max]
gi|255636483|gb|ACU18580.1| unknown [Glycine max]
Length = 377
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 84/159 (52%), Gaps = 16/159 (10%)
Query: 115 ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNKK 174
+ +HF KYGEI + + D TG+ RGF FI + D SV D + E HVIN K+
Sbjct: 57 QFIKHFGKYGEITDSVIMKDRKTGQPRGFGFITYAD------PSVVDKVIEEPHVINGKQ 110
Query: 175 IEAKKAKAKSG---------KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQR 225
+E K+ + KIFVGG+ + ++E + F ++G + + ++ D S ++
Sbjct: 111 VEIKRTIPRGAVGSKDFRTKKIFVGGIPSNVTEDEFRDFFTRYGEVKDHQIMRDHSTNRS 170
Query: 226 KNFCFITFEHESVVIDLLK-NPKQKINDKEVDVKKATPK 263
+ F FITFE E V DLL K +V++KKA PK
Sbjct: 171 RGFGFITFESEEAVDDLLSMGNKIDFAGAQVEIKKAEPK 209
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 182 AKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVID 241
A GKIF+GGL+ E + HF ++G I ++ + D+ Q + F FIT+ SVV
Sbjct: 39 ASPGKIFIGGLARETTIAQFIKHFGKYGEITDSVIMKDRKTGQPRGFGFITYADPSVVDK 98
Query: 242 LLKNPKQKINDKEVDVKKATPK 263
+++ P IN K+V++K+ P+
Sbjct: 99 VIEEP-HVINGKQVEIKRTIPR 119
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 49/79 (62%), Gaps = 7/79 (8%)
Query: 107 GIVHKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
GI +TE E ++ F++YGE+++ + D +T RSRGF FI F+ E +V+D+++
Sbjct: 136 GIPSNVTEDEFRDFFTRYGEVKDHQIMRDHSTNRSRGFGFITFESEE-----AVDDLLSM 190
Query: 166 GNHV-INNKKIEAKKAKAK 183
GN + ++E KKA+ K
Sbjct: 191 GNKIDFAGAQVEIKKAEPK 209
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
Query: 601 GIVDKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLE 649
GI +TE E ++ F++YGE+++ + D +T RSRGF FI F+ E+++
Sbjct: 136 GIPSNVTEDEFRDFFTRYGEVKDHQIMRDHSTNRSRGFGFITFESEEAVD 185
Score = 40.4 bits (93), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 25/42 (59%)
Query: 609 ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+ +HF KYGEI + + D TG+ RGF FI + D ++K
Sbjct: 57 QFIKHFGKYGEITDSVIMKDRKTGQPRGFGFITYADPSVVDK 98
>gi|110738919|dbj|BAF01381.1| hypothetical protein [Arabidopsis thaliana]
Length = 205
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/150 (36%), Positives = 83/150 (55%), Gaps = 19/150 (12%)
Query: 107 GIVHKITEE--LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIA 164
G +HK T +HF KYGEI + + D +TG+ RGF FI F D SV D +
Sbjct: 24 GGLHKDTTNTVFNKHFGKYGEITDSVIMRDRHTGQPRGFGFITFAD------PSVVDKVI 77
Query: 165 EGNHVINNKKIEAKKA-----------KAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIE 213
E HVIN K++E K+ K+ KIFVGG+ + ++E+K FA++GN++E
Sbjct: 78 EDTHVINGKQVEIKRTIPKGAGGNQSKDIKTKKIFVGGIPSTVTEDELKDFFAKYGNVVE 137
Query: 214 TEMPYDKSKSQRKNFCFITFEHESVVIDLL 243
++ D ++ + F F+ F+ E VV +LL
Sbjct: 138 HQVIRDHETNRSRGFGFVIFDSEEVVDELL 167
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Query: 182 AKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVID 241
A GKIF+GGL + + HF ++G I ++ + D+ Q + F FITF SVV
Sbjct: 16 ASPGKIFIGGLHKDTTNTVFNKHFGKYGEITDSVIMRDRHTGQPRGFGFITFADPSVVDK 75
Query: 242 LLKNPKQKINDKEVDVKKATPK 263
++++ IN K+V++K+ PK
Sbjct: 76 VIEDT-HVINGKQVEIKRTIPK 96
Score = 43.5 bits (101), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVY 657
D +HF KYGEI + + D +TG+ RGF FI F D ++K +ED +
Sbjct: 29 DTTNTVFNKHFGKYGEITDSVIMRDRHTGQPRGFGFITFADPSVVDKV-IEDTH 81
Score = 42.4 bits (98), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 591 EAKNKMVSHPGIVDKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLE 649
+ K K + GI +TE ELK+ F+KYG + + D T RSRGF F++F E ++
Sbjct: 105 DIKTKKIFVGGIPSTVTEDELKDFFAKYGNVVEHQVIRDHETNRSRGFGFVIFDSEEVVD 164
Query: 650 K 650
+
Sbjct: 165 E 165
>gi|405123948|gb|AFR98711.1| heterogeneous nuclear ribonucleoprotein HRP1 [Cryptococcus
neoformans var. grubii H99]
Length = 474
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 84/139 (60%), Gaps = 13/139 (9%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + TE L E+ ++GEI+ T+ DP +GRSRGFAF+ ++D ASV V+A+
Sbjct: 118 GLNWETTEAGLSEYMGQFGEIDACTIMRDP-SGRSRGFAFLTYRD-----PASVTKVMAQ 171
Query: 166 GNHVINNKKIEAKKA-----KAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDK 220
+H ++ K+I+ K+A ++ K+FVGGL+P + E +K+ QFG +++ + +DK
Sbjct: 172 THH-LDGKQIDPKRAIPRAEHERTAKVFVGGLAPSVTGESLKSFLCQFGQVMDATVMFDK 230
Query: 221 SKSQRKNFCFITFEHESVV 239
+ K F F TF+ E V
Sbjct: 231 ETGRSKGFAFATFQDEESV 249
Score = 47.0 bits (110), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 47/90 (52%), Gaps = 12/90 (13%)
Query: 107 GIVHKIT-EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ +T E LK ++G++ + T+ D TGRS+GFAF F+D ES+ +A +
Sbjct: 201 GLAPSVTGESLKSFLCQFGQVMDATVMFDKETGRSKGFAFATFQDEESVGRAMAASGV-- 258
Query: 166 GNHVINNKKIEAKKAKAKS-GKIFVGGLSP 194
++E K+ + + G F G ++P
Sbjct: 259 --------ELEGKQPRGTAQGSKFGGNMNP 280
Score = 45.8 bits (107), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Query: 601 GIVDKIT-EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
G+ +T E LK ++G++ + T+ D TGRS+GFAF F+D ES+ +A
Sbjct: 201 GLAPSVTGESLKSFLCQFGQVMDATVMFDKETGRSKGFAFATFQDEESVGRA 252
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Query: 610 LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVE 654
L E+ ++GEI+ T+ DP +GRSRGFAF+ ++D S+ K +
Sbjct: 128 LSEYMGQFGEIDACTIMRDP-SGRSRGFAFLTYRDPASVTKVMAQ 171
Score = 43.9 bits (102), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GK+F+GGL+ E + + + QFG I + D S R F F+T+ + V ++
Sbjct: 112 GKMFIGGLNWETTEAGLSEYMGQFGEIDACTIMRDPSGRSR-GFAFLTYRDPASVTKVMA 170
Query: 245 NPKQKINDKEVDVKKATPKPE 265
++ K++D K+A P+ E
Sbjct: 171 Q-THHLDGKQIDPKRAIPRAE 190
>gi|149063557|gb|EDM13880.1| rCG21724, isoform CRA_a [Rattus norvegicus]
Length = 311
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/139 (37%), Positives = 81/139 (58%), Gaps = 14/139 (10%)
Query: 134 DPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNKKIEAK---------KAKAKS 184
DP T RSRGF F+ F D +A V+ V+A+ H +++K I+ K K ++
Sbjct: 3 DPLTKRSRGFGFVTFMD-----QAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVTRT 57
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
KIFVGGLS E++K +F QFG + + + +DK+ ++ + F F+TFE E +V + +
Sbjct: 58 KKIFVGGLSVNTTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 117
Query: 245 NPKQKINDKEVDVKKATPK 263
+IN+K V+ KKA PK
Sbjct: 118 IHFHEINNKMVECKKAQPK 136
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 43/75 (57%), Gaps = 5/75 (6%)
Query: 109 VHKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNH 168
V+ E++K +F ++G++++ L D T R RGF F+ F+ + +EK V H
Sbjct: 67 VNTTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEK-----VCEIHFH 121
Query: 169 VINNKKIEAKKAKAK 183
INNK +E KKA+ K
Sbjct: 122 EINNKMVECKKAQPK 136
Score = 42.4 bits (98), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Query: 603 VDKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFY 659
V+ E++K +F ++G++++ L D T R RGF F+ F+ + +EK V +++F+
Sbjct: 67 VNTTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEK--VCEIHFH 121
Score = 39.7 bits (91), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 30/46 (65%)
Query: 452 YDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 497
+DK+ ++ + F F+TFE E +V + + +IN+K V+ KKA PK
Sbjct: 91 FDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPK 136
>gi|50548677|ref|XP_501808.1| YALI0C13860p [Yarrowia lipolytica]
gi|49647675|emb|CAG82118.1| YALI0C13860p [Yarrowia lipolytica CLIB122]
Length = 367
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 87/147 (59%), Gaps = 1/147 (0%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
E L +F+++GE+ T+ D +G+SRGF F+ F+D + + ++ +G +I+ K
Sbjct: 13 ESLTNYFAQFGEVLECTVMRDHFSGKSRGFGFLTFRDPKCVNAVMAKEHYLDGK-IIDPK 71
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
+ ++ + K+ KIFVGG+ ++ +E+ K F Q+G +I+ ++ DK + + F F+TF
Sbjct: 72 RAIPREEQDKTSKIFVGGVGSDVTEEDYKQFFEQYGTVIDAQLMIDKDSGRPRGFGFVTF 131
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKA 260
+ E + +L P + DK ++VK+A
Sbjct: 132 DSEQAMNTILAQPLLILKDKPIEVKRA 158
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Query: 187 IFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNP 246
+F+GGL+ E DE + +FAQFG ++E + D + + F F+TF V ++
Sbjct: 1 MFIGGLNWETTDESLTNYFAQFGEVLECTVMRDHFSGKSRGFGFLTFRDPKCVNAVMAK- 59
Query: 247 KQKINDKEVDVKKATPKPE 265
+ ++ K +D K+A P+ E
Sbjct: 60 EHYLDGKIIDPKRAIPREE 78
Score = 39.3 bits (90), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 30/51 (58%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYF 658
E L +F+++GE+ T+ D +G+SRGF F+ F+D + + ++ Y
Sbjct: 13 ESLTNYFAQFGEVLECTVMRDHFSGKSRGFGFLTFRDPKCVNAVMAKEHYL 63
>gi|226483447|emb|CAX74024.1| Heterogeneous nuclear ribonucleoprotein 27C [Schistosoma japonicum]
Length = 543
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 96/165 (58%), Gaps = 14/165 (8%)
Query: 107 GIVHKIT--EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIA 164
G +H+ T + LK +FSK+G+IE T+ D TGRSRGF ++ FK+ ES V+ V+
Sbjct: 16 GGLHQSTTNDSLKLYFSKFGDIEESTVMMDNRTGRSRGFGYVKFKNDES-----VDWVLR 70
Query: 165 EGNHVINNKKIEAKKAKA-------KSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMP 217
+ H+I+ K+++ K+ +S K+FVGG++ + + I+ F+ +G + + +
Sbjct: 71 QKTHLIDLKEVDPKRCNVNMKGKNRRSLKVFVGGIAFDHDENIIRNFFSSYGRVTDVNLL 130
Query: 218 YDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATP 262
++K + + F F+ F+ E VV +L+K +N K+V++K P
Sbjct: 131 AGQTKPRHRGFAFVGFDDEEVVRNLIKLHYLNLNGKQVEIKAMKP 175
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 45/76 (59%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GK+FVGGL ++ +K +F++FG+I E+ + D + + F ++ F+++ V +L+
Sbjct: 11 GKLFVGGLHQSTTNDSLKLYFSKFGDIEESTVMMDNRTGRSRGFGYVKFKNDESVDWVLR 70
Query: 245 NPKQKINDKEVDVKKA 260
I+ KEVD K+
Sbjct: 71 QKTHLIDLKEVDPKRC 86
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 31/42 (73%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLE 649
+ LK +FSK+G+IE T+ D TGRSRGF ++ FK+ ES++
Sbjct: 25 DSLKLYFSKFGDIEESTVMMDNRTGRSRGFGYVKFKNDESVD 66
>gi|429892780|gb|AGA18935.1| heterogeneous nuclear ribonucleoprotein [Drosophila melanogaster]
Length = 421
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 99/198 (50%), Gaps = 25/198 (12%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + T+E L +F ++G+I + + + +GRSRGF F+ F D +V V+
Sbjct: 13 GLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFAD-----PTNVNHVLQN 67
Query: 166 GNHVINNKKIEAKKA------KAKSG---KIFVGGLSPEMKDEEIKAHFAQFGNIIETEM 216
G H ++ + I+ K K K G K+F+GGL + + +++ F ++G + E +
Sbjct: 68 GPHTLDGRTIDPKPCNPRTLQKPKKGGGYKVFLGGLPSNVTETDLRTFFNRYGKVTEVVI 127
Query: 217 PYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGVRGGRGGR 276
YD+ K + + F F++FE ES V + +N K+V++KKA P R G
Sbjct: 128 MYDQEKKKSRGFGFLSFEEESSVEHVTNERYINLNGKQVEIKKAEP----------RDGS 177
Query: 277 GGRGGRGGRMAGGYGGYG 294
GG+ + G YG G
Sbjct: 178 GGQNSNNSTVGGAYGKLG 195
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 44/79 (55%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GK+FVGGLS E E + +F +FG+II+ + + + + F F+TF + V +L+
Sbjct: 7 GKLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVLQ 66
Query: 245 NPKQKINDKEVDVKKATPK 263
N ++ + +D K P+
Sbjct: 67 NGPHTLDGRTIDPKPCNPR 85
Score = 42.4 bits (98), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 41/85 (48%), Gaps = 10/85 (11%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGV 503
++ E + YD+ K + + F F++FE ES V + +N K+V++KKA P
Sbjct: 121 KVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNERYINLNGKQVEIKKAEP------- 173
Query: 504 RGGRGGRGGRGGRGGRMAGGYGGYG 528
R G GG+ + G YG G
Sbjct: 174 ---RDGSGGQNSNNSTVGGAYGKLG 195
Score = 38.9 bits (89), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 601 GIVDKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVE 654
G+ +TE +L+ F++YG++ V + D +SRGF F+ F++ S+E + E
Sbjct: 102 GLPSNVTETDLRTFFNRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNE 156
>gi|429892786|gb|AGA18938.1| heterogeneous nuclear ribonucleoprotein, partial [Drosophila
melanogaster]
Length = 418
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 99/198 (50%), Gaps = 25/198 (12%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + T+E L +F ++G+I + + + +GRSRGF F+ F D +V V+
Sbjct: 10 GLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFAD-----PTNVNHVLQN 64
Query: 166 GNHVINNKKIEAKKA------KAKSG---KIFVGGLSPEMKDEEIKAHFAQFGNIIETEM 216
G H ++ + I+ K K K G K+F+GGL + + +++ F ++G + E +
Sbjct: 65 GPHTLDGRTIDPKPCNPRTLQKPKKGGGYKVFLGGLPSNVTETDLRTFFNRYGKVTEVVI 124
Query: 217 PYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGVRGGRGGR 276
YD+ K + + F F++FE ES V + +N K+V++KKA P R G
Sbjct: 125 MYDQEKKKSRGFGFLSFEEESSVEHVTNERYINLNGKQVEIKKAEP----------RDGS 174
Query: 277 GGRGGRGGRMAGGYGGYG 294
GG+ + G YG G
Sbjct: 175 GGQNSNNSTVGGAYGKLG 192
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GK+FV GLS E E + +F +FG+II+ + + + + F F+TF + V +L+
Sbjct: 4 GKLFVYGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVLQ 63
Query: 245 NPKQKINDKEVDVKKATPK 263
N ++ + +D K P+
Sbjct: 64 NGPHTLDGRTIDPKPCNPR 82
Score = 42.4 bits (98), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 41/85 (48%), Gaps = 10/85 (11%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGV 503
++ E + YD+ K + + F F++FE ES V + +N K+V++KKA P
Sbjct: 118 KVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNERYINLNGKQVEIKKAEP------- 170
Query: 504 RGGRGGRGGRGGRGGRMAGGYGGYG 528
R G GG+ + G YG G
Sbjct: 171 ---RDGSGGQNSNNSTVGGAYGKLG 192
Score = 39.3 bits (90), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 601 GIVDKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVE 654
G+ +TE +L+ F++YG++ V + D +SRGF F+ F++ S+E + E
Sbjct: 99 GLPSNVTETDLRTFFNRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNE 153
>gi|429892782|gb|AGA18936.1| heterogeneous nuclear ribonucleoprotein, partial [Drosophila
melanogaster]
Length = 420
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 99/198 (50%), Gaps = 25/198 (12%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + T+E L +F ++G+I + + + +GRSRGF F+ F D +V V+
Sbjct: 12 GLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFAD-----PTNVNHVLQN 66
Query: 166 GNHVINNKKIEAKKA------KAKSG---KIFVGGLSPEMKDEEIKAHFAQFGNIIETEM 216
G H ++ + I+ K K K G K+F+GGL + + +++ F ++G + E +
Sbjct: 67 GPHTLDGRTIDPKPCNPRTLQKPKKGGGYKVFLGGLPSNVTETDLRTFFNRYGKVTEVVI 126
Query: 217 PYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGVRGGRGGR 276
YD+ K + + F F++FE ES V + +N K+V++KKA P R G
Sbjct: 127 MYDQEKKKSRGFGFLSFEEESSVEHVTNERYINLNGKQVEIKKAEP----------RDGS 176
Query: 277 GGRGGRGGRMAGGYGGYG 294
GG+ + G YG G
Sbjct: 177 GGQNSNNSTVGGAYGKLG 194
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GK+FV GLS E E + +F +FG+II+ + + + + F F+TF + V +L+
Sbjct: 6 GKLFVDGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVLQ 65
Query: 245 NPKQKINDKEVDVKKATPK 263
N ++ + +D K P+
Sbjct: 66 NGPHTLDGRTIDPKPCNPR 84
Score = 42.4 bits (98), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 41/85 (48%), Gaps = 10/85 (11%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGV 503
++ E + YD+ K + + F F++FE ES V + +N K+V++KKA P
Sbjct: 120 KVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNERYINLNGKQVEIKKAEP------- 172
Query: 504 RGGRGGRGGRGGRGGRMAGGYGGYG 528
R G GG+ + G YG G
Sbjct: 173 ---RDGSGGQNSNNSTVGGAYGKLG 194
Score = 38.9 bits (89), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 601 GIVDKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVE 654
G+ +TE +L+ F++YG++ V + D +SRGF F+ F++ S+E + E
Sbjct: 101 GLPSNVTETDLRTFFNRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNE 155
>gi|217074298|gb|ACJ85509.1| unknown [Medicago truncatula]
gi|388503058|gb|AFK39595.1| unknown [Medicago truncatula]
Length = 397
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 97/197 (49%), Gaps = 35/197 (17%)
Query: 113 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDV--IAEGNHVI 170
TE LKE+ SKYGE+E+ + + +TGRSRGF ++ F ASV+D + G HV+
Sbjct: 17 TEGLKEYMSKYGELEDCIVMKERSTGRSRGFGYVTF--------ASVDDAKEVLSGEHVL 68
Query: 171 NNKKIEAKKAKAKS---------GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKS 221
++ +E K A K +IFV + P + +E ++HF ++G+I + MP D+
Sbjct: 69 GDRMLEVKVATPKEEMRAPAKKVTRIFVARIPPSVTEETFRSHFEKYGDITDLCMPKDQG 128
Query: 222 KSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGVRGGRGGRGGRGG 281
+ FITF + V +L+ ++ V V +ATPK +
Sbjct: 129 SKMHRGIGFITFGNAESVENLMSE-THELGGSAVVVDRATPKEDDVKPT----------- 176
Query: 282 RGGRMA--GGYGGYGGY 296
GRM+ GGYG Y Y
Sbjct: 177 --GRMSQGGGYGAYNAY 191
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 80/204 (39%), Gaps = 50/204 (24%)
Query: 108 IVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEG 166
I +TEE + HF KYG+I ++ + D + RG FI F + ES+E E G
Sbjct: 99 IPPSVTEETFRSHFEKYGDITDLCMPKDQGSKMHRGIGFITFGNAESVENLMSETHELGG 158
Query: 167 NHVINNKKI------------------------------------------------EAK 178
+ V+ ++ +
Sbjct: 159 SAVVVDRATPKEDDVKPTGRMSQGGGYGAYNAYISTATRYAALGAPTLYDHPGPIYGRGE 218
Query: 179 KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESV 238
+ S KIFVG L PE E+++ +F +FG I + +P D ++ + F F+TF E V
Sbjct: 219 PRRRISKKIFVGRLPPEANSEDLRQYFGRFGRIEDVCIPRDPKRTGHRGFGFVTFADEGV 278
Query: 239 VIDLLKNPKQKINDKEVDVKKATP 262
+ P +I EV + ATP
Sbjct: 279 ADRVSLRP-HEICGHEVAIDSATP 301
Score = 46.2 bits (108), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 84/215 (39%), Gaps = 52/215 (24%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGV 503
+I + MP D+ + FITF + V +L+ ++ V V +ATPK +
Sbjct: 117 DITDLCMPKDQGSKMHRGIGFITFGNAESVENLMSE-THELGGSAVVVDRATPKEDDVKP 175
Query: 504 RGGRGGRGGRGGRGGRMAGGYGGYGGYGGGYGELDYLQLWQFFDWISSSFSENCLLEDSI 563
G RM+ G GGYG Y +IS++ L
Sbjct: 176 TG-------------RMSQG-GGYGAYNA---------------YISTATRYAAL----- 201
Query: 564 GKPLTVSCSHYHYLFDQNLRTHYFYIVEAKNKMVSHPGIVDKI-----TEELKEHFSKYG 618
G P L+D Y + +S V ++ +E+L+++F ++G
Sbjct: 202 GAPT---------LYDH---PGPIYGRGEPRRRISKKIFVGRLPPEANSEDLRQYFGRFG 249
Query: 619 EIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASV 653
IE+V + DP RGF F+ F D ++ S+
Sbjct: 250 RIEDVCIPRDPKRTGHRGFGFVTFADEGVADRVSL 284
Score = 45.4 bits (106), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 33/53 (62%), Gaps = 8/53 (15%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDV 656
D TE LKE+ SKYGE+E+ + + +TGRSRGF ++ F ASV+D
Sbjct: 14 DVDTEGLKEYMSKYGELEDCIVMKERSTGRSRGFGYVTF--------ASVDDA 58
Score = 43.9 bits (102), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 18/78 (23%)
Query: 113 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKAS-------------- 158
+E+L+++F ++G IE+V + DP RGF F+ F D ++ S
Sbjct: 238 SEDLRQYFGRFGRIEDVCIPRDPKRTGHRGFGFVTFADEGVADRVSLRPHEICGHEVAID 297
Query: 159 ----VEDVIAEGNHVINN 172
V+D GN ++NN
Sbjct: 298 SATPVDDARPSGNFMMNN 315
Score = 39.7 bits (91), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 602 IVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLE 649
I +TEE + HF KYG+I ++ + D + RG FI F + ES+E
Sbjct: 99 IPPSVTEETFRSHFEKYGDITDLCMPKDQGSKMHRGIGFITFGNAESVE 147
>gi|321469931|gb|EFX80909.1| hypothetical protein DAPPUDRAFT_224415 [Daphnia pulex]
Length = 464
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 86/165 (52%), Gaps = 20/165 (12%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+ L +FS+YGE+ + + +P TGRSRGF FI F D + V V+ H+++N+
Sbjct: 34 DNLLRYFSQYGEVVDCVVMKNPETGRSRGFGFITFADPNN-----VGLVLQNTPHILDNR 88
Query: 174 KIEAKKAKAKSG---------------KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPY 218
I+ K ++ K+F+GGL + + +++ F+Q+G + E + Y
Sbjct: 89 TIDPKPCNPRAEMVRAPRRSMGTGNGYKVFLGGLPSNLTETDLRNFFSQYGKVSEVVIMY 148
Query: 219 DKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
D+ K + + F F+TFE E V IN K+V++KKA P+
Sbjct: 149 DQEKKKSRGFGFLTFESEESVDRCTGEHYVSINGKQVEIKKAEPR 193
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 47/83 (56%)
Query: 183 KSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDL 242
+ GK+F+GGLS E + + +F+Q+G +++ + + + + F FITF + V +
Sbjct: 18 EQGKMFIGGLSWETTRDNLLRYFSQYGEVVDCVVMKNPETGRSRGFGFITFADPNNVGLV 77
Query: 243 LKNPKQKINDKEVDVKKATPKPE 265
L+N ++++ +D K P+ E
Sbjct: 78 LQNTPHILDNRTIDPKPCNPRAE 100
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 27/41 (65%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESL 648
+ L +FS+YGE+ + + +P TGRSRGF FI F D ++
Sbjct: 34 DNLLRYFSQYGEVVDCVVMKNPETGRSRGFGFITFADPNNV 74
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 601 GIVDKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVE 654
G+ +TE +L+ FS+YG++ V + D +SRGF F+ F+ ES+++ + E
Sbjct: 121 GLPSNLTETDLRNFFSQYGKVSEVVIMYDQEKKKSRGFGFLTFESEESVDRCTGE 175
>gi|429892776|gb|AGA18933.1| heterogeneous nuclear ribonucleoprotein [Drosophila melanogaster]
Length = 421
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 99/198 (50%), Gaps = 25/198 (12%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + T+E L +F ++G+I + + + +GRSRGF F+ F D +V V+
Sbjct: 13 GLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFAD-----PTNVNHVLQN 67
Query: 166 GNHVINNKKIEAKKA------KAKSG---KIFVGGLSPEMKDEEIKAHFAQFGNIIETEM 216
G H ++ + I+ K K K G K+F+GGL + + +++ F ++G + E +
Sbjct: 68 GPHTLDGRTIDPKPCNPRTLQKPKKGGGYKVFLGGLPSNVTETDLRTFFNRYGKVTEVVI 127
Query: 217 PYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGVRGGRGGR 276
YD+ K + + F F++FE ES V + +N K+V++KKA P R G
Sbjct: 128 MYDQEKKKSRGFGFLSFEEESSVEHVTNERYINLNGKQVEIKKAEP----------RDGS 177
Query: 277 GGRGGRGGRMAGGYGGYG 294
GG+ + G YG G
Sbjct: 178 GGQNSNNSTVGGAYGKLG 195
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 44/79 (55%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GK+FVGGLS E E + +F +FG+II+ + + + + F F+TF + V +L+
Sbjct: 7 GKLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVLQ 66
Query: 245 NPKQKINDKEVDVKKATPK 263
N ++ + +D K P+
Sbjct: 67 NGPHTLDGRTIDPKPCNPR 85
Score = 42.4 bits (98), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 41/85 (48%), Gaps = 10/85 (11%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGV 503
++ E + YD+ K + + F F++FE ES V + +N K+V++KKA P
Sbjct: 121 KVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNERYINLNGKQVEIKKAEP------- 173
Query: 504 RGGRGGRGGRGGRGGRMAGGYGGYG 528
R G GG+ + G YG G
Sbjct: 174 ---RDGSGGQNSNNSTVGGAYGKLG 195
Score = 38.9 bits (89), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 601 GIVDKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVE 654
G+ +TE +L+ F++YG++ V + D +SRGF F+ F++ S+E + E
Sbjct: 102 GLPSNVTETDLRTFFNRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNE 156
>gi|429892774|gb|AGA18932.1| heterogeneous nuclear ribonucleoprotein, partial [Drosophila
melanogaster]
Length = 417
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 99/198 (50%), Gaps = 25/198 (12%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + T+E L +F ++G+I + + + +GRSRGF F+ F D +V V+
Sbjct: 9 GLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFAD-----PTNVNHVLQN 63
Query: 166 GNHVINNKKIEAKKA------KAKSG---KIFVGGLSPEMKDEEIKAHFAQFGNIIETEM 216
G H ++ + I+ K K K G K+F+GGL + + +++ F ++G + E +
Sbjct: 64 GPHTLDGRTIDPKPCNPRTLQKPKKGGGYKVFLGGLPSNVTETDLRTFFNRYGKVTEVVI 123
Query: 217 PYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGVRGGRGGR 276
YD+ K + + F F++FE ES V + +N K+V++KKA P R G
Sbjct: 124 MYDQEKKKSRGFGFLSFEEESSVEHVTNERYINLNGKQVEIKKAEP----------RDGS 173
Query: 277 GGRGGRGGRMAGGYGGYG 294
GG+ + G YG G
Sbjct: 174 GGQNSNNSTVGGAYGKLG 191
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 44/79 (55%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GK+FVGGLS E E + +F +FG+II+ + + + + F F+TF + V +L+
Sbjct: 3 GKLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVLQ 62
Query: 245 NPKQKINDKEVDVKKATPK 263
N ++ + +D K P+
Sbjct: 63 NGPHTLDGRTIDPKPCNPR 81
Score = 42.4 bits (98), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 41/85 (48%), Gaps = 10/85 (11%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGV 503
++ E + YD+ K + + F F++FE ES V + +N K+V++KKA P
Sbjct: 117 KVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNERYINLNGKQVEIKKAEP------- 169
Query: 504 RGGRGGRGGRGGRGGRMAGGYGGYG 528
R G GG+ + G YG G
Sbjct: 170 ---RDGSGGQNSNNSTVGGAYGKLG 191
Score = 39.3 bits (90), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 601 GIVDKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVE 654
G+ +TE +L+ F++YG++ V + D +SRGF F+ F++ S+E + E
Sbjct: 98 GLPSNVTETDLRTFFNRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNE 152
>gi|345489601|ref|XP_001600266.2| PREDICTED: heterogeneous nuclear ribonucleoprotein 27C-like isoform
1 [Nasonia vitripennis]
Length = 376
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 94/168 (55%), Gaps = 16/168 (9%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + T+E L+ +FS+YGE+ + + + +GRSRGF F+ F D ++V V+
Sbjct: 19 GLSWETTQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFSDP-----SNVGLVLQN 73
Query: 166 GNHVINNKKIEAK--------KAKAKSG--KIFVGGLSPEMKDEEIKAHFAQFGNIIETE 215
G H ++ + I+ K K K G K+F+GGL + + ++++ F +FG ++E
Sbjct: 74 GPHQLDGRTIDPKPCNPRTLQKPKRSGGFPKVFLGGLPSNVTETDLRSFFQRFGKVMEVV 133
Query: 216 MPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ YD+ K + + F F++FE E V + +N K+V++K+A P+
Sbjct: 134 IMYDQEKKKSRGFGFLSFEDEDAVDRCVGEHFVNLNGKQVEIKRAEPR 181
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 46/79 (58%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GK+FVGGLS E E ++ +F+++G +I+ + + + + F F+TF S V +L+
Sbjct: 13 GKLFVGGLSWETTQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFSDPSNVGLVLQ 72
Query: 245 NPKQKINDKEVDVKKATPK 263
N +++ + +D K P+
Sbjct: 73 NGPHQLDGRTIDPKPCNPR 91
Score = 42.4 bits (98), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 27/41 (65%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESL 648
E L+ +FS+YGE+ + + + +GRSRGF F+ F D ++
Sbjct: 27 ENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFSDPSNV 67
>gi|429892772|gb|AGA18931.1| heterogeneous nuclear ribonucleoprotein, partial [Drosophila
melanogaster]
Length = 420
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 99/198 (50%), Gaps = 25/198 (12%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + T+E L +F ++G+I + + + +GRSRGF F+ F D +V V+
Sbjct: 12 GLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFAD-----PTNVNHVLQN 66
Query: 166 GNHVINNKKIEAKKA------KAKSG---KIFVGGLSPEMKDEEIKAHFAQFGNIIETEM 216
G H ++ + I+ K K K G K+F+GGL + + +++ F ++G + E +
Sbjct: 67 GPHTLDGRTIDPKPCNPRTLQKPKKGGGYKVFLGGLPSNVTETDLRTFFNRYGKVTEVVI 126
Query: 217 PYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGVRGGRGGR 276
YD+ K + + F F++FE ES V + +N K+V++KKA P R G
Sbjct: 127 MYDQEKKKSRGFGFLSFEEESSVEHVTNERYINLNGKQVEIKKAEP----------RDGS 176
Query: 277 GGRGGRGGRMAGGYGGYG 294
GG+ + G YG G
Sbjct: 177 GGQNSNNSTVGGAYGKLG 194
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 44/79 (55%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GK+FVGGLS E E + +F +FG+II+ + + + + F F+TF + V +L+
Sbjct: 6 GKLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVLQ 65
Query: 245 NPKQKINDKEVDVKKATPK 263
N ++ + +D K P+
Sbjct: 66 NGPHTLDGRTIDPKPCNPR 84
Score = 42.4 bits (98), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 41/85 (48%), Gaps = 10/85 (11%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGV 503
++ E + YD+ K + + F F++FE ES V + +N K+V++KKA P
Sbjct: 120 KVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNERYINLNGKQVEIKKAEP------- 172
Query: 504 RGGRGGRGGRGGRGGRMAGGYGGYG 528
R G GG+ + G YG G
Sbjct: 173 ---RDGSGGQNSNNSTVGGAYGKLG 194
Score = 38.9 bits (89), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 601 GIVDKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVE 654
G+ +TE +L+ F++YG++ V + D +SRGF F+ F++ S+E + E
Sbjct: 101 GLPSNVTETDLRTFFNRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNE 155
>gi|171451950|dbj|BAG15903.1| musashi [Dugesia japonica]
Length = 473
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 90/162 (55%), Gaps = 16/162 (9%)
Query: 113 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINN 172
+E L+ +FS++GEI+ + D RSRGF F+ F D + K V+ + NH++++
Sbjct: 56 SEALQSYFSQFGEIKEFMVMRDIVHKRSRGFGFVTFTDYNGVIK-----VLKQENHILDS 110
Query: 173 KKIEAK-----------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKS 221
KKI+ K K A++ KIF+GG++ EEI+ +F ++G + E+ DK+
Sbjct: 111 KKIDPKLAVPKSICQPEKISARTKKIFIGGIATSSTVEEIRQYFNRYGEVENCELMMDKA 170
Query: 222 KSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
++ + F F+TF E V + + IN+K V+ KKA PK
Sbjct: 171 TNRHRGFGFVTFLDEDVAEQICQIHYHNINNKMVEAKKALPK 212
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 55/107 (51%), Gaps = 4/107 (3%)
Query: 176 EAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEH 235
E + + K+FVGGL+P E ++++F+QFG I E + D + + F F+TF
Sbjct: 34 EISASSNEPCKLFVGGLNPTTTSEALQSYFSQFGEIKEFMVMRDIVHKRSRGFGFVTFTD 93
Query: 236 ESVVIDLLKNPKQKINDKEVDVKKATPK----PEPFGVRGGRGGRGG 278
+ VI +LK ++ K++D K A PK PE R + GG
Sbjct: 94 YNGVIKVLKQENHILDSKKIDPKLAVPKSICQPEKISARTKKIFIGG 140
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 590 VEAKNKMVSHPGIVDKIT-EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESL 648
+ A+ K + GI T EE++++F++YGE+EN L D T R RGF F+ F D +
Sbjct: 129 ISARTKKIFIGGIATSSTVEEIRQYFNRYGEVENCELMMDKATNRHRGFGFVTFLDEDVA 188
Query: 649 EK 650
E+
Sbjct: 189 EQ 190
>gi|402585407|gb|EJW79347.1| heterogeneous nuclear ribonucleoprotein A1 [Wuchereria bancrofti]
Length = 322
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 96/188 (51%), Gaps = 17/188 (9%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ T+E LKE +SK+G + + + DP T RSRGF F+ F +++ V+ +A
Sbjct: 5 GLTSSTTDETLKEFYSKWGTLVDCVVMRDPATKRSRGFGFVSFS-----KQSEVDAAMAN 59
Query: 166 GNHVINNKKIEAKKAKAK-----------SGKIFVGGLSPEMKDEEIKAHFAQFGNIIET 214
H+I+ K ++ K+A + S +++V G+ E ++ K HF ++GNI++
Sbjct: 60 RPHIIDGKTVDPKRAVPREQSQRSEANISSKRLYVSGVREEHTEDMFKEHFGKYGNILKC 119
Query: 215 EMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGVRGGRG 274
E+ DK+ + + F FITF+ V + IN+ DVKKA K E V+
Sbjct: 120 EIIADKNTGKPRGFAFITFDDYDAVDKCVLIKSHMINNYRCDVKKALSKEEMAKVQQQER 179
Query: 275 GRGGRGGR 282
R RG R
Sbjct: 180 ERMDRGAR 187
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Query: 601 GIVDKITEEL-KEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFY 659
G+ ++ TE++ KEHF KYG I + +D NTG+ RGFAFI F D ++++K + +
Sbjct: 96 GVREEHTEDMFKEHFGKYGNILKCEIIADKNTGKPRGFAFITFDDYDAVDKCVLIKSHMI 155
Query: 660 SN 661
+N
Sbjct: 156 NN 157
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 45/79 (56%)
Query: 187 IFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNP 246
+F+GGL+ DE +K ++++G +++ + D + + + F F++F +S V + N
Sbjct: 1 MFIGGLTSSTTDETLKEFYSKWGTLVDCVVMRDPATKRSRGFGFVSFSKQSEVDAAMANR 60
Query: 247 KQKINDKEVDVKKATPKPE 265
I+ K VD K+A P+ +
Sbjct: 61 PHIIDGKTVDPKRAVPREQ 79
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
G+ T+E LKE +SK+G + + + DP T RSRGF F+ F ++ A
Sbjct: 5 GLTSSTTDETLKEFYSKWGTLVDCVVMRDPATKRSRGFGFVSFSKQSEVDAA 56
>gi|345489599|ref|XP_003426177.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 27C-like isoform
2 [Nasonia vitripennis]
Length = 445
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 94/168 (55%), Gaps = 16/168 (9%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + T+E L+ +FS+YGE+ + + + +GRSRGF F+ F D ++V V+
Sbjct: 19 GLSWETTQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFSDP-----SNVGLVLQN 73
Query: 166 GNHVINNKKIEAK--------KAKAKSG--KIFVGGLSPEMKDEEIKAHFAQFGNIIETE 215
G H ++ + I+ K K K G K+F+GGL + + ++++ F +FG ++E
Sbjct: 74 GPHQLDGRTIDPKPCNPRTLQKPKRSGGFPKVFLGGLPSNVTETDLRSFFQRFGKVMEVV 133
Query: 216 MPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ YD+ K + + F F++FE E V + +N K+V++K+A P+
Sbjct: 134 IMYDQEKKKSRGFGFLSFEDEDAVDRCVGEHFVNLNGKQVEIKRAEPR 181
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 46/79 (58%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GK+FVGGLS E E ++ +F+++G +I+ + + + + F F+TF S V +L+
Sbjct: 13 GKLFVGGLSWETTQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFSDPSNVGLVLQ 72
Query: 245 NPKQKINDKEVDVKKATPK 263
N +++ + +D K P+
Sbjct: 73 NGPHQLDGRTIDPKPCNPR 91
Score = 42.4 bits (98), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 28/45 (62%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESL 648
+ E L+ +FS+YGE+ + + + +GRSRGF F+ F D ++
Sbjct: 23 ETTQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFSDPSNV 67
>gi|325185730|emb|CCA20211.1| conserved unknown protein putative [Albugo laibachii Nc14]
Length = 465
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 95/185 (51%), Gaps = 35/185 (18%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + TEE L++HF KYG + + L D +G+ RGF F+ F D +V D + E
Sbjct: 108 GVSWETTEETLRDHFGKYGPLTDAALMKDKFSGQPRGFGFVTFADV------AVLDRVLE 161
Query: 166 GNHVINNKKIEAKKA----KAKSG-----------------------KIFVGGLSPEMKD 198
+H I+ + +E K+A K SG K+FVGGL P + +
Sbjct: 162 ESHTIDGRTVEVKRAIPRDKTASGPSDVRSSGAHGRGNSGGVITESKKVFVGGLPPSVTE 221
Query: 199 EEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVK 258
++ + +F +FG I + + +D+ + + F F+TFE E V +++ +++ K V++K
Sbjct: 222 QDFRRYFEEFGRITDAVVMFDRETQRSRGFGFVTFEEEGAVAEVISK-THELHGKVVEIK 280
Query: 259 KATPK 263
+A PK
Sbjct: 281 RAEPK 285
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 60/107 (56%), Gaps = 6/107 (5%)
Query: 180 AKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVV 239
A+ + GK+F+GG+S E +E ++ HF ++G + + + DK Q + F F+TF + V
Sbjct: 97 AQKQPGKLFIGGVSWETTEETLRDHFGKYGPLTDAALMKDKFSGQPRGFGFVTFA-DVAV 155
Query: 240 IDLLKNPKQKINDKEVDVKKATPKPE----PFGVR-GGRGGRGGRGG 281
+D + I+ + V+VK+A P+ + P VR G GRG GG
Sbjct: 156 LDRVLEESHTIDGRTVEVKRAIPRDKTASGPSDVRSSGAHGRGNSGG 202
Score = 42.7 bits (99), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
G+ + TEE L++HF KYG + + L D +G+ RGF F+ F D L++
Sbjct: 108 GVSWETTEETLRDHFGKYGPLTDAALMKDKFSGQPRGFGFVTFADVAVLDR 158
>gi|324508919|gb|ADY43760.1| Heterogeneous nuclear ribonucleoprotein A1 [Ascaris suum]
Length = 378
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 97/189 (51%), Gaps = 17/189 (8%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ T+E L+E +SK+GE+ + + DP T RSRGF F+ + +++ V++ +A
Sbjct: 27 GLTSTTTDETLREFYSKWGELVDCVVMRDPTTKRSRGFGFVSYS-----KQSEVDEAMAN 81
Query: 166 GNHVINNKKIEAKKAKAK-----------SGKIFVGGLSPEMKDEEIKAHFAQFGNIIET 214
HVI+ K ++ K+A + S +++V G+ + ++ K HF ++GNII+
Sbjct: 82 RPHVIDGKTVDPKRAVPREQSQRSEANISSKRLYVSGVREDHTEQMFKDHFGKYGNIIKC 141
Query: 215 EMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGVRGGRG 274
E+ DK+ + + F F+TF+ V + IN+ DVKKA K E +
Sbjct: 142 EIIADKATGKPRGFAFVTFDDYDAVDKCILIKSHMINNARCDVKKALSKEEMAKAQQQER 201
Query: 275 GRGGRGGRG 283
R RG R
Sbjct: 202 ERMDRGTRS 210
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 47/80 (58%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+F+GGL+ DE ++ ++++G +++ + D + + + F F+++ +S V + + N
Sbjct: 22 KMFIGGLTSTTTDETLREFYSKWGELVDCVVMRDPTTKRSRGFGFVSYSKQSEVDEAMAN 81
Query: 246 PKQKINDKEVDVKKATPKPE 265
I+ K VD K+A P+ +
Sbjct: 82 RPHVIDGKTVDPKRAVPREQ 101
Score = 45.4 bits (106), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 601 GIVDKITEEL-KEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
G+ + TE++ K+HF KYG I + +D TG+ RGFAF+ F D ++++K
Sbjct: 118 GVREDHTEQMFKDHFGKYGNIIKCEIIADKATGKPRGFAFVTFDDYDAVDKC 169
Score = 42.4 bits (98), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
G+ T+E L+E +SK+GE+ + + DP T RSRGF F+ + +++A
Sbjct: 27 GLTSTTTDETLREFYSKWGELVDCVVMRDPTTKRSRGFGFVSYSKQSEVDEA 78
>gi|195390403|ref|XP_002053858.1| GJ23111 [Drosophila virilis]
gi|194151944|gb|EDW67378.1| GJ23111 [Drosophila virilis]
Length = 382
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 88/166 (53%), Gaps = 7/166 (4%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKAS------V 159
G+ ++ T+E LK HF K+G I +V + DP T RSRGF FI + + ++ A +
Sbjct: 31 GLDYRTTDEGLKAHFEKWGNIVDVVVMKDPKTKRSRGFGFITYSQSYMIDNAQNARPHKI 90
Query: 160 EDVIAEGNHVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYD 219
+ E + ++I+A A A K+FVGGL + +E ++ +F +FG I+ + D
Sbjct: 91 DGRTVEPKRAVPRQEIDAPNAGATVKKLFVGGLRDDHDEECLREYFKEFGQIVGVNIVSD 150
Query: 220 KSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE 265
K +++ F FI F+ V ++ I +K +DVKKA K +
Sbjct: 151 KDTGKKRGFAFIEFDDYDPVDKIILQKTHNIKNKTLDVKKAIAKQD 196
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 50/81 (61%), Gaps = 2/81 (2%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+F+GGL DE +KAHF ++GNI++ + D + + F FIT+ +S +ID +N
Sbjct: 26 KLFIGGLDYRTTDEGLKAHFEKWGNIVDVVVMKDPKTKRSRGFGFITYS-QSYMIDNAQN 84
Query: 246 PK-QKINDKEVDVKKATPKPE 265
+ KI+ + V+ K+A P+ E
Sbjct: 85 ARPHKIDGRTVEPKRAVPRQE 105
Score = 47.0 bits (110), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFY 659
G+ D EE L+E+F ++G+I V + SD +TG+ RGFAFI F D + ++K ++ +
Sbjct: 122 GLRDDHDEECLREYFKEFGQIVGVNIVSDKDTGKKRGFAFIEFDDYDPVDKIILQKTHNI 181
Query: 660 SN 661
N
Sbjct: 182 KN 183
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 27/45 (60%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKAS 652
E LK HF K+G I +V + DP T RSRGF FI + + ++ A
Sbjct: 39 EGLKAHFEKWGNIVDVVVMKDPKTKRSRGFGFITYSQSYMIDNAQ 83
>gi|429892784|gb|AGA18937.1| heterogeneous nuclear ribonucleoprotein, partial [Drosophila
melanogaster]
Length = 420
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 99/198 (50%), Gaps = 25/198 (12%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + T+E L +F ++G+I + + + +GRSRGF F+ F D +V V+
Sbjct: 12 GLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFAD-----PTNVNHVLQN 66
Query: 166 GNHVINNKKIEAKKA------KAKSG---KIFVGGLSPEMKDEEIKAHFAQFGNIIETEM 216
G H ++ + I+ K K K G K+F+GGL + + +++ F ++G + E +
Sbjct: 67 GPHTLDGRTIDPKPCNPRTLQKPKKGGGYKVFLGGLPSNVTETDLRTFFNRYGKVTEVVI 126
Query: 217 PYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGVRGGRGGR 276
YD+ K + + F F++FE ES V + +N K+V++KKA P R G
Sbjct: 127 MYDQEKKKSRGFGFLSFEEESSVEHVTNERYINLNGKQVEIKKAEP----------RDGS 176
Query: 277 GGRGGRGGRMAGGYGGYG 294
GG+ + G YG G
Sbjct: 177 GGQNSNNSTVGGAYGKLG 194
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 44/79 (55%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GK+FVGGLS E E + +F +FG+II+ + + + + F F+TF + V +L+
Sbjct: 6 GKLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVLQ 65
Query: 245 NPKQKINDKEVDVKKATPK 263
N ++ + +D K P+
Sbjct: 66 NGPHTLDGRTIDPKPCNPR 84
Score = 42.4 bits (98), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 41/85 (48%), Gaps = 10/85 (11%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGV 503
++ E + YD+ K + + F F++FE ES V + +N K+V++KKA P
Sbjct: 120 KVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNERYINLNGKQVEIKKAEP------- 172
Query: 504 RGGRGGRGGRGGRGGRMAGGYGGYG 528
R G GG+ + G YG G
Sbjct: 173 ---RDGSGGQNSNNSTVGGAYGKLG 194
Score = 38.9 bits (89), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 601 GIVDKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVE 654
G+ +TE +L+ F++YG++ V + D +SRGF F+ F++ S+E + E
Sbjct: 101 GLPSNVTETDLRTFFNRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNE 155
>gi|194862724|ref|XP_001970091.1| GG10443 [Drosophila erecta]
gi|195471631|ref|XP_002088106.1| GE14209 [Drosophila yakuba]
gi|190661958|gb|EDV59150.1| GG10443 [Drosophila erecta]
gi|194174207|gb|EDW87818.1| GE14209 [Drosophila yakuba]
Length = 421
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 99/198 (50%), Gaps = 25/198 (12%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + T+E L +F ++G+I + + + +GRSRGF F+ F D +V V+
Sbjct: 13 GLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFAD-----PTNVNHVLQN 67
Query: 166 GNHVINNKKIEAKKA------KAKSG---KIFVGGLSPEMKDEEIKAHFAQFGNIIETEM 216
G H ++ + I+ K K K G K+F+GGL + + +++ F ++G + E +
Sbjct: 68 GPHTLDGRTIDPKPCNPRTLQKPKKGGGYKVFLGGLPSNVTETDLRTFFGRYGKVTEVVI 127
Query: 217 PYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGVRGGRGGR 276
YD+ K + + F F++FE ES V + +N K+V++KKA P R G
Sbjct: 128 MYDQEKKKSRGFGFLSFEEESSVEHVTNERYINLNGKQVEIKKAEP----------RDGS 177
Query: 277 GGRGGRGGRMAGGYGGYG 294
GG+ + G YG G
Sbjct: 178 GGQNSNNSTVGGAYGKLG 195
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 44/79 (55%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GK+FVGGLS E E + +F +FG+II+ + + + + F F+TF + V +L+
Sbjct: 7 GKLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVLQ 66
Query: 245 NPKQKINDKEVDVKKATPK 263
N ++ + +D K P+
Sbjct: 67 NGPHTLDGRTIDPKPCNPR 85
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 41/85 (48%), Gaps = 10/85 (11%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGV 503
++ E + YD+ K + + F F++FE ES V + +N K+V++KKA P
Sbjct: 121 KVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNERYINLNGKQVEIKKAEP------- 173
Query: 504 RGGRGGRGGRGGRGGRMAGGYGGYG 528
R G GG+ + G YG G
Sbjct: 174 ---RDGSGGQNSNNSTVGGAYGKLG 195
>gi|194760296|ref|XP_001962377.1| GF15435 [Drosophila ananassae]
gi|190616074|gb|EDV31598.1| GF15435 [Drosophila ananassae]
Length = 421
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 99/198 (50%), Gaps = 25/198 (12%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + T+E L +F ++G+I + + + +GRSRGF F+ F D +V V+
Sbjct: 13 GLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFAD-----PTNVNHVLQN 67
Query: 166 GNHVINNKKIEAKKA------KAKSG---KIFVGGLSPEMKDEEIKAHFAQFGNIIETEM 216
G H ++ + I+ K K K G K+F+GGL + + +++ F ++G + E +
Sbjct: 68 GPHTLDGRTIDPKPCNPRTLQKPKKGGGYKVFLGGLPSNVTETDLRTFFGRYGKVTEVVI 127
Query: 217 PYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGVRGGRGGR 276
YD+ K + + F F++FE ES V + +N K+V++KKA P R G
Sbjct: 128 MYDQEKKKSRGFGFLSFEEESSVEHVTNERYINLNGKQVEIKKAEP----------RDGS 177
Query: 277 GGRGGRGGRMAGGYGGYG 294
GG+ + G YG G
Sbjct: 178 GGQNSNNSTVGGAYGKLG 195
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 44/79 (55%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GK+FVGGLS E E + +F +FG+II+ + + + + F F+TF + V +L+
Sbjct: 7 GKLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVLQ 66
Query: 245 NPKQKINDKEVDVKKATPK 263
N ++ + +D K P+
Sbjct: 67 NGPHTLDGRTIDPKPCNPR 85
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 41/85 (48%), Gaps = 10/85 (11%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGV 503
++ E + YD+ K + + F F++FE ES V + +N K+V++KKA P
Sbjct: 121 KVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNERYINLNGKQVEIKKAEP------- 173
Query: 504 RGGRGGRGGRGGRGGRMAGGYGGYG 528
R G GG+ + G YG G
Sbjct: 174 ---RDGSGGQNSNNSTVGGAYGKLG 195
>gi|429892778|gb|AGA18934.1| heterogeneous nuclear ribonucleoprotein [Drosophila melanogaster]
Length = 421
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 98/195 (50%), Gaps = 25/195 (12%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + T+E L +F ++G+I + + + +GRSRGF F+ F D +V V+
Sbjct: 13 GLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFAD-----PTNVNHVLQN 67
Query: 166 GNHVINNKKIEAKKA------KAKSG---KIFVGGLSPEMKDEEIKAHFAQFGNIIETEM 216
G H ++ + I+ K K K G K+F+GGL + + +++ F ++G + E +
Sbjct: 68 GPHTLDGRTIDPKPCNPRTLQKPKKGGGYKVFLGGLPSNVTETDLRTFFNRYGKVTEVVI 127
Query: 217 PYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGVRGGRGGR 276
YD+ K + + F F++FE ES V + +N K+V++KKA P R G
Sbjct: 128 MYDQEKKKSRGFGFLSFEEESSVEHVTNERYINLNGKQVEIKKAEP----------RDGS 177
Query: 277 GGRGGRGGRMAGGYG 291
GG+ + G YG
Sbjct: 178 GGQNSNNSTVGGAYG 192
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 44/79 (55%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GK+FVGGLS E E + +F +FG+II+ + + + + F F+TF + V +L+
Sbjct: 7 GKLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVLQ 66
Query: 245 NPKQKINDKEVDVKKATPK 263
N ++ + +D K P+
Sbjct: 67 NGPHTLDGRTIDPKPCNPR 85
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 10/82 (12%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGV 503
++ E + YD+ K + + F F++FE ES V + +N K+V++KKA P
Sbjct: 121 KVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNERYINLNGKQVEIKKAEP------- 173
Query: 504 RGGRGGRGGRGGRGGRMAGGYG 525
R G GG+ + G YG
Sbjct: 174 ---RDGSGGQNSNNSTVGGAYG 192
Score = 38.9 bits (89), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 601 GIVDKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVE 654
G+ +TE +L+ F++YG++ V + D +SRGF F+ F++ S+E + E
Sbjct: 102 GLPSNVTETDLRTFFNRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNE 156
>gi|195500856|ref|XP_002097553.1| GE24426 [Drosophila yakuba]
gi|194183654|gb|EDW97265.1| GE24426 [Drosophila yakuba]
Length = 391
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 87/166 (52%), Gaps = 7/166 (4%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKAS------V 159
G+ ++ T+E LK HF K+G I +V + DP T RSRGF FI + + ++ A +
Sbjct: 30 GLDYRTTDEGLKAHFEKWGNIVDVVVMKDPKTKRSRGFGFITYSQSYMIDNAQDARPHKI 89
Query: 160 EDVIAEGNHVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYD 219
+ E + ++I+A A A K+FVGGL + +E ++ +F FG I+ + D
Sbjct: 90 DGRTVEPKRAVPRQEIDAPNAGATVKKLFVGGLRDDHDEECLREYFKDFGQIVGVNIVSD 149
Query: 220 KSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE 265
K +++ F FI F+ V ++ I +K +DVKKA K +
Sbjct: 150 KDTGKKRGFAFIEFDDYDPVDKIILQKNHTIKNKSLDVKKAIAKQD 195
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 50/81 (61%), Gaps = 2/81 (2%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+F+GGL DE +KAHF ++GNI++ + D + + F FIT+ +S +ID ++
Sbjct: 25 KLFIGGLDYRTTDEGLKAHFEKWGNIVDVVVMKDPKTKRSRGFGFITYS-QSYMIDNAQD 83
Query: 246 PK-QKINDKEVDVKKATPKPE 265
+ KI+ + V+ K+A P+ E
Sbjct: 84 ARPHKIDGRTVEPKRAVPRQE 104
Score = 46.2 bits (108), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
G+ D EE L+E+F +G+I V + SD +TG+ RGFAFI F D + ++K
Sbjct: 121 GLRDDHDEECLREYFKDFGQIVGVNIVSDKDTGKKRGFAFIEFDDYDPVDK 171
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 27/45 (60%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKAS 652
E LK HF K+G I +V + DP T RSRGF FI + + ++ A
Sbjct: 38 EGLKAHFEKWGNIVDVVVMKDPKTKRSRGFGFITYSQSYMIDNAQ 82
>gi|226507640|ref|NP_001146692.1| uncharacterized protein LOC100280293 [Zea mays]
gi|219888359|gb|ACL54554.1| unknown [Zea mays]
gi|413934065|gb|AFW68616.1| hypothetical protein ZEAMMB73_548572 [Zea mays]
gi|413934066|gb|AFW68617.1| hypothetical protein ZEAMMB73_548572 [Zea mays]
gi|413934067|gb|AFW68618.1| hypothetical protein ZEAMMB73_548572 [Zea mays]
Length = 453
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 97/196 (49%), Gaps = 28/196 (14%)
Query: 96 MEAKNKMVSHPGIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESL 154
ME+ + GI + TEE L EHFS YGE+ + D TGR RGF F+VF D ++
Sbjct: 1 MESDQGKLFIGGISWETTEEKLSEHFSAYGEVTQAAVMRDKITGRPRGFGFVVFADPAAV 60
Query: 155 EKASVEDVIAEGNHV-----INNKKIEAKKAK----------------------AKSGKI 187
++A + +G V ++ ++ +A KA A++ KI
Sbjct: 61 DRALQDPHTLDGRTVDVKRALSREEQQASKAANPSGGRNSGGGGGGGGGSDASGARTKKI 120
Query: 188 FVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPK 247
FVGGL + ++ + +F FG + + + YD++ + + F FITF+ E V +L+
Sbjct: 121 FVGGLPSTLTEDGFRQYFETFGIVTDVVVMYDQNTQRPRGFGFITFDSEDAVDRVLQKTF 180
Query: 248 QKINDKEVDVKKATPK 263
+ K V+VK+A P+
Sbjct: 181 HDLGGKLVEVKRALPR 196
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
GI + TEE L EHFS YGE+ + D TGR RGF F+VF D ++++A
Sbjct: 12 GISWETTEEKLSEHFSAYGEVTQAAVMRDKITGRPRGFGFVVFADPAAVDRA 63
Score = 39.3 bits (90), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 592 AKNKMVSHPGIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
A+ K + G+ +TE+ +++F +G + +V + D NT R RGF FI F +++++
Sbjct: 115 ARTKKIFVGGLPSTLTEDGFRQYFETFGIVTDVVVMYDQNTQRPRGFGFITFDSEDAVDR 174
>gi|195036930|ref|XP_001989921.1| GH19058 [Drosophila grimshawi]
gi|193894117|gb|EDV92983.1| GH19058 [Drosophila grimshawi]
Length = 379
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 88/166 (53%), Gaps = 7/166 (4%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKAS------V 159
G+ ++ T+E LK HF K+G I +V + DP T RSRGF FI + + ++ A +
Sbjct: 31 GLDYRTTDEGLKAHFEKWGNIVDVVVMKDPKTKRSRGFGFITYSQSYMIDNAQNARPHKI 90
Query: 160 EDVIAEGNHVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYD 219
+ E + ++I+A A A K+FVGGL + +E ++ +F +FG I+ + D
Sbjct: 91 DGRTVEPKRAVPRQEIDAPNAGATVKKLFVGGLRDDHDEECLREYFKEFGQIVGVNIVSD 150
Query: 220 KSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE 265
K +++ F FI F+ V ++ I +K +DVKKA K +
Sbjct: 151 KDTGKKRGFAFIEFDDYDPVDKIILQKTHNIKNKTLDVKKAIAKQD 196
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 50/81 (61%), Gaps = 2/81 (2%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+F+GGL DE +KAHF ++GNI++ + D + + F FIT+ +S +ID +N
Sbjct: 26 KLFIGGLDYRTTDEGLKAHFEKWGNIVDVVVMKDPKTKRSRGFGFITYS-QSYMIDNAQN 84
Query: 246 PK-QKINDKEVDVKKATPKPE 265
+ KI+ + V+ K+A P+ E
Sbjct: 85 ARPHKIDGRTVEPKRAVPRQE 105
Score = 46.6 bits (109), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFY 659
G+ D EE L+E+F ++G+I V + SD +TG+ RGFAFI F D + ++K ++ +
Sbjct: 122 GLRDDHDEECLREYFKEFGQIVGVNIVSDKDTGKKRGFAFIEFDDYDPVDKIILQKTHNI 181
Query: 660 SN 661
N
Sbjct: 182 KN 183
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 27/44 (61%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
E LK HF K+G I +V + DP T RSRGF FI + + ++ A
Sbjct: 39 EGLKAHFEKWGNIVDVVVMKDPKTKRSRGFGFITYSQSYMIDNA 82
>gi|422296095|gb|EKU23394.1| RNA-binding protein Musashi, partial [Nannochloropsis gaditana
CCMP526]
Length = 240
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 91/176 (51%), Gaps = 20/176 (11%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ TEE L +F KYGE+ +V L D NTG RGF F+ F ++E A E + +
Sbjct: 51 GVAWHTTEEGLSSYFGKYGELTDVVLMRDKNTGGPRGFGFVSFATPAAMEAAVSEAHMLD 110
Query: 166 GNHVINNKKIEAKKAKAKS------------------GKIFVGGLSPEMKDEEIKAHFAQ 207
G ++ K + ++A A K+FVGGLSP++ +E +A+F +
Sbjct: 111 GRNLDVKKAVPREQAPAPVRAIWGGTGAGPQRQFQDIKKVFVGGLSPDVTEEAFRAYFDK 170
Query: 208 FGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
FG I + + D++ + + F F+T+ E+ + +L + + + +DVK+A PK
Sbjct: 171 FGEITDAVVMMDRTTGRSRGFGFVTYAEEAAMKKVLSQ-QHDMEGRPMDVKRAEPK 225
Score = 45.8 bits (107), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVE 654
G+ TEE L +F KYGE+ +V L D NTG RGF F+ F ++E A E
Sbjct: 51 GVAWHTTEEGLSSYFGKYGELTDVVLMRDKNTGGPRGFGFVSFATPAAMEAAVSE 105
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 51/93 (54%), Gaps = 2/93 (2%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
KIFVGG++ +E + ++F ++G + + + DK+ + F F++F + ++ +
Sbjct: 46 KIFVGGVAWHTTEEGLSSYFGKYGELTDVVLMRDKNTGGPRGFGFVSFATPA-AMEAAVS 104
Query: 246 PKQKINDKEVDVKKATPKPE-PFGVRGGRGGRG 277
++ + +DVKKA P+ + P VR GG G
Sbjct: 105 EAHMLDGRNLDVKKAVPREQAPAPVRAIWGGTG 137
Score = 43.9 bits (102), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
G+ +TEE + +F K+GEI + + D TGRSRGF F+ + + +++K
Sbjct: 154 GLSPDVTEEAFRAYFDKFGEITDAVVMMDRTTGRSRGFGFVTYAEEAAMKK 204
>gi|195338791|ref|XP_002036007.1| GM16252 [Drosophila sechellia]
gi|195577167|ref|XP_002078444.1| Hrb27C [Drosophila simulans]
gi|194129887|gb|EDW51930.1| GM16252 [Drosophila sechellia]
gi|194190453|gb|EDX04029.1| Hrb27C [Drosophila simulans]
Length = 421
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 99/198 (50%), Gaps = 25/198 (12%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + T+E L +F ++G+I + + + +GRSRGF F+ F D +V V+
Sbjct: 13 GLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFAD-----PTNVNHVLQN 67
Query: 166 GNHVINNKKIEAKKA------KAKSG---KIFVGGLSPEMKDEEIKAHFAQFGNIIETEM 216
G H ++ + I+ K K K G K+F+GGL + + +++ F ++G + E +
Sbjct: 68 GPHTLDGRTIDPKPCNPRTLQKPKKGGGYKVFLGGLPSNVTETDLRTFFGRYGKVTEVVI 127
Query: 217 PYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGVRGGRGGR 276
YD+ K + + F F++FE ES V + +N K+V++KKA P R G
Sbjct: 128 MYDQEKKKSRGFGFLSFEEESSVEHVTNERYINLNGKQVEIKKAEP----------RDGS 177
Query: 277 GGRGGRGGRMAGGYGGYG 294
GG+ + G YG G
Sbjct: 178 GGQNSNNSTVGGAYGKLG 195
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 44/79 (55%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GK+FVGGLS E E + +F +FG+II+ + + + + F F+TF + V +L+
Sbjct: 7 GKLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVLQ 66
Query: 245 NPKQKINDKEVDVKKATPK 263
N ++ + +D K P+
Sbjct: 67 NGPHTLDGRTIDPKPCNPR 85
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 41/85 (48%), Gaps = 10/85 (11%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGV 503
++ E + YD+ K + + F F++FE ES V + +N K+V++KKA P
Sbjct: 121 KVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNERYINLNGKQVEIKKAEP------- 173
Query: 504 RGGRGGRGGRGGRGGRMAGGYGGYG 528
R G GG+ + G YG G
Sbjct: 174 ---RDGSGGQNSNNSTVGGAYGKLG 195
>gi|125984017|ref|XP_001355773.1| GA10287 [Drosophila pseudoobscura pseudoobscura]
gi|54644090|gb|EAL32832.1| GA10287 [Drosophila pseudoobscura pseudoobscura]
Length = 421
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 98/195 (50%), Gaps = 25/195 (12%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + T+E L +F ++G+I + + + +GRSRGF F+ F D +V V+
Sbjct: 13 GLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFAD-----PTNVNHVLQN 67
Query: 166 GNHVINNKKIEAKKA------KAKSG---KIFVGGLSPEMKDEEIKAHFAQFGNIIETEM 216
G H ++ + I+ K K K G K+F+GGL + + +++ F ++G + E +
Sbjct: 68 GPHTLDGRTIDPKPCNPRTLQKPKKGGGYKVFLGGLPSNVTETDLRTFFGRYGKVTEVVI 127
Query: 217 PYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGVRGGRGGR 276
YD+ K + + F F++FE ES V + +N K+V++KKA P R G
Sbjct: 128 MYDQEKKKSRGFGFLSFEEESSVEHVTNERYINLNGKQVEIKKAEP----------RDGS 177
Query: 277 GGRGGRGGRMAGGYG 291
GG+ + G YG
Sbjct: 178 GGQNSNNSTVGGAYG 192
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 44/79 (55%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GK+FVGGLS E E + +F +FG+II+ + + + + F F+TF + V +L+
Sbjct: 7 GKLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVLQ 66
Query: 245 NPKQKINDKEVDVKKATPK 263
N ++ + +D K P+
Sbjct: 67 NGPHTLDGRTIDPKPCNPR 85
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 10/82 (12%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGV 503
++ E + YD+ K + + F F++FE ES V + +N K+V++KKA P
Sbjct: 121 KVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNERYINLNGKQVEIKKAEP------- 173
Query: 504 RGGRGGRGGRGGRGGRMAGGYG 525
R G GG+ + G YG
Sbjct: 174 ---RDGSGGQNSNNSTVGGAYG 192
>gi|195438186|ref|XP_002067018.1| GK24781 [Drosophila willistoni]
gi|194163103|gb|EDW78004.1| GK24781 [Drosophila willistoni]
Length = 422
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 98/195 (50%), Gaps = 25/195 (12%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + T+E L +F ++G+I + + + +GRSRGF F+ F D +V V+
Sbjct: 13 GLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFAD-----PTNVNHVLQN 67
Query: 166 GNHVINNKKIEAKKA------KAKSG---KIFVGGLSPEMKDEEIKAHFAQFGNIIETEM 216
G H ++ + I+ K K K G K+F+GGL + + +++ F ++G + E +
Sbjct: 68 GPHTLDGRTIDPKPCNPRTLQKPKKGGGYKVFLGGLPSNVTETDLRTFFGRYGKVTEVVI 127
Query: 217 PYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGVRGGRGGR 276
YD+ K + + F F++FE ES V + +N K+V++KKA P R G
Sbjct: 128 MYDQEKKKSRGFGFLSFEEESSVEHVTNERYINLNGKQVEIKKAEP----------RDGS 177
Query: 277 GGRGGRGGRMAGGYG 291
GG+ + G YG
Sbjct: 178 GGQNSNNSAVGGAYG 192
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 44/79 (55%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GK+FVGGLS E E + +F +FG+II+ + + + + F F+TF + V +L+
Sbjct: 7 GKLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVLQ 66
Query: 245 NPKQKINDKEVDVKKATPK 263
N ++ + +D K P+
Sbjct: 67 NGPHTLDGRTIDPKPCNPR 85
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 10/82 (12%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGV 503
++ E + YD+ K + + F F++FE ES V + +N K+V++KKA P
Sbjct: 121 KVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNERYINLNGKQVEIKKAEP------- 173
Query: 504 RGGRGGRGGRGGRGGRMAGGYG 525
R G GG+ + G YG
Sbjct: 174 ---RDGSGGQNSNNSAVGGAYG 192
>gi|148905890|gb|ABR16107.1| unknown [Picea sitchensis]
gi|224285605|gb|ACN40521.1| unknown [Picea sitchensis]
gi|224285970|gb|ACN40697.1| unknown [Picea sitchensis]
Length = 371
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 90/164 (54%), Gaps = 19/164 (11%)
Query: 116 LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNKKI 175
++FSKYGE+ + + D TG RGF F+ + D SV D + + H I+ K +
Sbjct: 67 FTKYFSKYGELTDSVIMKDRATGNPRGFGFVTYAD------PSVVDKVIKDKHFIDGKMV 120
Query: 176 EAKKA---------KAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRK 226
E K+ K+ KIFVGG+ + ++E K +F++FG ++E ++ D + +
Sbjct: 121 EIKRTIPRGNAATKGPKTKKIFVGGIPTSITEDEFKDYFSKFGKVLEHQIMQDHGTGRSR 180
Query: 227 NFCFITFEHESVVIDLLKNPKQ-KINDKEVDVKKATPK---PEP 266
F F+TF+ E V ++L + K ++ K+V++KKA PK PEP
Sbjct: 181 GFGFVTFDSEEAVEEILSHGKMCELGGKQVEIKKAEPKKALPEP 224
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 56/104 (53%), Gaps = 6/104 (5%)
Query: 165 EGNHVINNKKIE-----AKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYD 219
+GN NN E A + + GKIF+GGLS E +F+++G + ++ + D
Sbjct: 26 DGNSQENNGPQEQKNNGASRDTSSPGKIFIGGLSRETSSATFTKYFSKYGELTDSVIMKD 85
Query: 220 KSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
++ + F F+T+ SVV ++K+ K I+ K V++K+ P+
Sbjct: 86 RATGNPRGFGFVTYADPSVVDKVIKD-KHFIDGKMVEIKRTIPR 128
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 50/87 (57%), Gaps = 7/87 (8%)
Query: 99 KNKMVSHPGIVHKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 157
K K + GI ITE E K++FSK+G++ + D TGRSRGF F+ F E
Sbjct: 137 KTKKIFVGGIPTSITEDEFKDYFSKFGKVLEHQIMQDHGTGRSRGFGFVTFDSEE----- 191
Query: 158 SVEDVIAEGNHV-INNKKIEAKKAKAK 183
+VE++++ G + K++E KKA+ K
Sbjct: 192 AVEEILSHGKMCELGGKQVEIKKAEPK 218
Score = 46.6 bits (109), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 593 KNKMVSHPGIVDKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
K K + GI ITE E K++FSK+G++ + D TGRSRGF F+ F E++E+
Sbjct: 137 KTKKIFVGGIPTSITEDEFKDYFSKFGKVLEHQIMQDHGTGRSRGFGFVTFDSEEAVEE 195
>gi|294925396|ref|XP_002778913.1| RNA-binding protein squid, putative [Perkinsus marinus ATCC 50983]
gi|239887759|gb|EER10708.1| RNA-binding protein squid, putative [Perkinsus marinus ATCC 50983]
Length = 297
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/160 (35%), Positives = 92/160 (57%), Gaps = 15/160 (9%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ TEE + + FS++G + +V +K D TGRSRGF F+VF+ E A + +
Sbjct: 54 GVPFTATEEDVADFFSQFGPVASVEIKMDKVTGRSRGFGFVVFETAEGKMGA----MRRK 109
Query: 166 GNHVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQR 225
G+ V++N++I + A ++FVGG+ P+M +E I HF+++G + + E P +
Sbjct: 110 GDLVLHNRQINIGETTAD--RVFVGGVPPQMSNEAIATHFSKYGPVQDIEGPPN------ 161
Query: 226 KNFCFITFEHESVVID-LLKNPKQKINDK-EVDVKKATPK 263
KN+ F+ F S + L+ NP+ + D VDVKKA P+
Sbjct: 162 KNYLFVVFTDPSGARNCLMDNPENHVIDGVRVDVKKAQPR 201
Score = 43.9 bits (102), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 28/39 (71%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTE 646
E++ + FS++G + +V +K D TGRSRGF F+VF+ E
Sbjct: 62 EDVADFFSQFGPVASVEIKMDKVTGRSRGFGFVVFETAE 100
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 53/111 (47%), Gaps = 10/111 (9%)
Query: 85 DQILRTHFFYIMEAKNKMVSHPGIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGF 143
D +L I E V G+ +++ E + HFSKYG ++++ + PN + +
Sbjct: 111 DLVLHNRQINIGETTADRVFVGGVPPQMSNEAIATHFSKYGPVQDI--EGPPN----KNY 164
Query: 144 AFIVFKDTESLEKASVEDVIAEGNHVINNKKIEAKKAKAKSGKIFVGGLSP 194
F+VF D +++ NHVI+ +++ KKA+ ++ G SP
Sbjct: 165 LFVVFTDPSGARNCLMDN---PENHVIDGVRVDVKKAQPRNQSPHSAGQSP 212
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 35/65 (53%)
Query: 170 INNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFC 229
++ ++ A++ KIF+GG+ +E++ F+QFG + E+ DK + + F
Sbjct: 33 MSPRRSSAERPIRTGPKIFIGGVPFTATEEDVADFFSQFGPVASVEIKMDKVTGRSRGFG 92
Query: 230 FITFE 234
F+ FE
Sbjct: 93 FVVFE 97
>gi|312083050|ref|XP_003143699.1| heterogeneous ribonuclear particle protein [Loa loa]
Length = 349
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 96/188 (51%), Gaps = 17/188 (9%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ T+E LKE +SK+G + + + DP T RSRGF F+ F +++ V+ +A
Sbjct: 32 GLTSSTTDETLKEFYSKWGTLVDCVVMRDPATKRSRGFGFVSFS-----KQSEVDAAMAN 86
Query: 166 GNHVINNKKIEAKKAKAK-----------SGKIFVGGLSPEMKDEEIKAHFAQFGNIIET 214
H+I+ K ++ K+A + S +++V G+ E ++ K HF ++GNI++
Sbjct: 87 RPHIIDGKTVDPKRAVPREQSQRSEANISSKRLYVSGVREEHTEDMFKEHFGKYGNILKC 146
Query: 215 EMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGVRGGRG 274
E+ DK+ + + F FITF+ V + IN+ DVKKA K E V+
Sbjct: 147 EIIADKNTGKPRGFAFITFDDYDAVDKCVLIKSHMINNYRCDVKKALSKEEMAKVQQQER 206
Query: 275 GRGGRGGR 282
R RG R
Sbjct: 207 ERMDRGAR 214
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Query: 601 GIVDKITEEL-KEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFY 659
G+ ++ TE++ KEHF KYG I + +D NTG+ RGFAFI F D ++++K + +
Sbjct: 123 GVREEHTEDMFKEHFGKYGNILKCEIIADKNTGKPRGFAFITFDDYDAVDKCVLIKSHMI 182
Query: 660 SN 661
+N
Sbjct: 183 NN 184
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 46/80 (57%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+F+GGL+ DE +K ++++G +++ + D + + + F F++F +S V + N
Sbjct: 27 KMFIGGLTSSTTDETLKEFYSKWGTLVDCVVMRDPATKRSRGFGFVSFSKQSEVDAAMAN 86
Query: 246 PKQKINDKEVDVKKATPKPE 265
I+ K VD K+A P+ +
Sbjct: 87 RPHIIDGKTVDPKRAVPREQ 106
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
G+ T+E LKE +SK+G + + + DP T RSRGF F+ F ++ A
Sbjct: 32 GLTSSTTDETLKEFYSKWGTLVDCVVMRDPATKRSRGFGFVSFSKQSEVDAA 83
>gi|189234126|ref|XP_969016.2| PREDICTED: similar to mammalian A1, A2 /B1 hnRNP homologue
[Tribolium castaneum]
gi|270002487|gb|EEZ98934.1| hypothetical protein TcasGA2_TC004556 [Tribolium castaneum]
Length = 338
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 89/166 (53%), Gaps = 7/166 (4%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKAS------V 159
G+ ++ T+E LK+HF K+GEI +V + DP T RSRGF FI + ++ A V
Sbjct: 25 GLDYRTTDESLKKHFEKWGEIVDVVVMKDPTTKRSRGFGFITYSRAHMVDDAQNDRPHKV 84
Query: 160 EDVIAEGNHVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYD 219
+ + E + + I +A A K+FVGGL ++++E+++ F +G I+ + D
Sbjct: 85 DGRVVEPKRAVPRQDIGRPEAGATVKKLFVGGLKDDVEEEDLRECFKSYGTILSCTIVTD 144
Query: 220 KSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE 265
K +++ F FI FE V + +I+ K +DVKKA K E
Sbjct: 145 KDTGKKRGFGFIEFEDYDPVDKICLYRHHQIHGKHIDVKKALSKAE 190
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 45/80 (56%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+F+GGL DE +K HF ++G I++ + D + + + F FIT+ +V D +
Sbjct: 20 KLFIGGLDYRTTDESLKKHFEKWGEIVDVVVMKDPTTKRSRGFGFITYSRAHMVDDAQND 79
Query: 246 PKQKINDKEVDVKKATPKPE 265
K++ + V+ K+A P+ +
Sbjct: 80 RPHKVDGRVVEPKRAVPRQD 99
Score = 47.8 bits (112), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 28/44 (63%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
E LK+HF K+GEI +V + DP T RSRGF FI + ++ A
Sbjct: 33 ESLKKHFEKWGEIVDVVVMKDPTTKRSRGFGFITYSRAHMVDDA 76
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
G+ D + EE L+E F YG I + T+ +D +TG+ RGF FI F+D + ++K
Sbjct: 116 GLKDDVEEEDLRECFKSYGTILSCTIVTDKDTGKKRGFGFIEFEDYDPVDK 166
>gi|66804019|gb|AAY56658.1| heterogeneous nuclear ribonucleoprotein [Drosophila simulans]
Length = 421
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 99/198 (50%), Gaps = 25/198 (12%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + T+E L +F ++G+I + + + +GRSRGF F+ F D +V V+
Sbjct: 13 GLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFAD-----PTNVNHVLQN 67
Query: 166 GNHVINNKKIEAKKA------KAKSG---KIFVGGLSPEMKDEEIKAHFAQFGNIIETEM 216
G H ++ + I+ K K K G K+F+GGL + + +++ F ++G + E +
Sbjct: 68 GPHTLDGRTIDPKPCNPRTLQKPKKGGGYKVFLGGLPSNVTETDLRTFFGRYGKVTEVVI 127
Query: 217 PYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGVRGGRGGR 276
YD+ K + + F F++FE ES V + +N K+V++KKA P R G
Sbjct: 128 MYDQEKKKSRGFGFLSFEEESSVEHVTNERYINLNGKQVEIKKAEP----------RDGS 177
Query: 277 GGRGGRGGRMAGGYGGYG 294
GG+ + G YG G
Sbjct: 178 GGQNSNNSTVGGAYGKLG 195
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 44/79 (55%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GK+FVGGLS E E + +F +FG+II+ + + + + F F+TF + V +L+
Sbjct: 7 GKLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVLQ 66
Query: 245 NPKQKINDKEVDVKKATPK 263
N ++ + +D K P+
Sbjct: 67 NGPHTLDGRTIDPKPCNPR 85
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 41/85 (48%), Gaps = 10/85 (11%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGV 503
++ E + YD+ K + + F F++FE ES V + +N K+V++KKA P
Sbjct: 121 KVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNERYINLNGKQVEIKKAEP------- 173
Query: 504 RGGRGGRGGRGGRGGRMAGGYGGYG 528
R G GG+ + G YG G
Sbjct: 174 ---RDGSGGQNSNNSTVGGAYGKLG 195
>gi|242006645|ref|XP_002424159.1| Heterogeneous nuclear ribonucleoprotein 27C, putative [Pediculus
humanus corporis]
gi|212507484|gb|EEB11421.1| Heterogeneous nuclear ribonucleoprotein 27C, putative [Pediculus
humanus corporis]
Length = 423
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 95/168 (56%), Gaps = 16/168 (9%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + T+E L+ +FS+YG++ + + + +GRSRGF F+ F D +V V+
Sbjct: 25 GLSWETTQEALQRYFSRYGDVVDCVVMKNTESGRSRGFGFVTFAD-----PTNVGVVLQN 79
Query: 166 GNHVINNKKIEAK--------KAKAKSG--KIFVGGLSPEMKDEEIKAHFAQFGNIIETE 215
G HV++ + I+ K K K +G K+F+GGL + + +++ F ++G ++E
Sbjct: 80 GPHVLDGRTIDPKPCNPRTLSKPKRNNGYPKVFLGGLPSNVTETDLRQFFMRYGKVMEVV 139
Query: 216 MPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ YD+ K + + F F++FE E V + + ++ K+V++KKA P+
Sbjct: 140 IMYDQEKKKSRGFGFLSFEDEDAVERCVADHFVNLHGKQVEIKKAEPR 187
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 45/78 (57%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+FVGGLS E E ++ +F+++G++++ + + + + F F+TF + V +L+N
Sbjct: 20 KLFVGGLSWETTQEALQRYFSRYGDVVDCVVMKNTESGRSRGFGFVTFADPTNVGVVLQN 79
Query: 246 PKQKINDKEVDVKKATPK 263
++ + +D K P+
Sbjct: 80 GPHVLDGRTIDPKPCNPR 97
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 27/41 (65%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESL 648
E L+ +FS+YG++ + + + +GRSRGF F+ F D ++
Sbjct: 33 EALQRYFSRYGDVVDCVVMKNTESGRSRGFGFVTFADPTNV 73
Score = 40.8 bits (94), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 601 GIVDKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVE 654
G+ +TE +L++ F +YG++ V + D +SRGF F+ F+D +++E+ +
Sbjct: 115 GLPSNVTETDLRQFFMRYGKVMEVVIMYDQEKKKSRGFGFLSFEDEDAVERCVAD 169
Score = 38.9 bits (89), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Query: 427 VTGTDMMHMEVTEAVPMEIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKIND 486
VT TD+ + ME++ + YD+ K + + F F++FE E V + + ++
Sbjct: 120 VTETDLRQFFMRYGKVMEVV---IMYDQEKKKSRGFGFLSFEDEDAVERCVADHFVNLHG 176
Query: 487 KEVDVKKATPK 497
K+V++KKA P+
Sbjct: 177 KQVEIKKAEPR 187
>gi|195113429|ref|XP_002001270.1| GI10692 [Drosophila mojavensis]
gi|193917864|gb|EDW16731.1| GI10692 [Drosophila mojavensis]
Length = 379
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 88/166 (53%), Gaps = 7/166 (4%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKAS------V 159
G+ ++ T+E LK HF K+G I +V + DP T RSRGF FI + + ++ A +
Sbjct: 31 GLDYRTTDEGLKAHFEKWGNIVDVVVMKDPKTKRSRGFGFITYSQSYMIDNAQNARPHKI 90
Query: 160 EDVIAEGNHVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYD 219
+ E + ++I+A A A K+FVGGL + +E ++ +F +FG I+ + D
Sbjct: 91 DGRTVEPKRAVPRQEIDAPNAGATVKKLFVGGLRDDHDEECLREYFKEFGQIVGVNIVSD 150
Query: 220 KSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE 265
K +++ F FI F+ V ++ I +K +DVKKA K +
Sbjct: 151 KDTGKKRGFAFIEFDDYDPVDKIILQKTHTIKNKTLDVKKAIAKQD 196
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 50/81 (61%), Gaps = 2/81 (2%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+F+GGL DE +KAHF ++GNI++ + D + + F FIT+ +S +ID +N
Sbjct: 26 KLFIGGLDYRTTDEGLKAHFEKWGNIVDVVVMKDPKTKRSRGFGFITYS-QSYMIDNAQN 84
Query: 246 PK-QKINDKEVDVKKATPKPE 265
+ KI+ + V+ K+A P+ E
Sbjct: 85 ARPHKIDGRTVEPKRAVPRQE 105
Score = 47.0 bits (110), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFY 659
G+ D EE L+E+F ++G+I V + SD +TG+ RGFAFI F D + ++K ++ +
Sbjct: 122 GLRDDHDEECLREYFKEFGQIVGVNIVSDKDTGKKRGFAFIEFDDYDPVDKIILQKTHTI 181
Query: 660 SN 661
N
Sbjct: 182 KN 183
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 27/45 (60%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKAS 652
E LK HF K+G I +V + DP T RSRGF FI + + ++ A
Sbjct: 39 EGLKAHFEKWGNIVDVVVMKDPKTKRSRGFGFITYSQSYMIDNAQ 83
>gi|297823133|ref|XP_002879449.1| hypothetical protein ARALYDRAFT_482284 [Arabidopsis lyrata subsp.
lyrata]
gi|297325288|gb|EFH55708.1| hypothetical protein ARALYDRAFT_482284 [Arabidopsis lyrata subsp.
lyrata]
Length = 403
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 89/173 (51%), Gaps = 31/173 (17%)
Query: 116 LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNKKI 175
L+E+FS +GE+ VT+ + TGR RGF F+ F D +V D + + H I+N+ +
Sbjct: 22 LREYFSNFGEVLQVTVMREKATGRPRGFGFVAFSDP------AVIDRVLQDKHHIDNRDV 75
Query: 176 EAKKA--------KAKSG-----------------KIFVGGLSPEMKDEEIKAHFAQFGN 210
+ K+A +SG KIFVGGL P + +E +A+F +G
Sbjct: 76 DVKRAMSREEQSPAGRSGNFNASRNFDSGANVRTKKIFVGGLPPALTSDEFRAYFETYGP 135
Query: 211 IIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ + + D++ + + F F++F+ E V +L +N K+V+VK+A PK
Sbjct: 136 VSDAVIMIDQTTQRPRGFGFVSFDSEDSVDLVLHKTFHDLNGKQVEVKRALPK 188
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Query: 181 KAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVI 240
++ GK+F+GG+S + + ++ +F+ FG +++ + +K+ + + F F+ F +V+
Sbjct: 2 ESDQGKLFIGGISWDTDENLLREYFSNFGEVLQVTVMREKATGRPRGFGFVAFSDPAVID 61
Query: 241 DLLKNPKQKINDKEVDVKKATPKPE 265
+L++ K I++++VDVK+A + E
Sbjct: 62 RVLQD-KHHIDNRDVDVKRAMSREE 85
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 40/72 (55%), Gaps = 5/72 (6%)
Query: 112 ITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVIN 171
++E + +F YG + + + D T R RGF F+ F D+E SV+ V+ + H +N
Sbjct: 122 TSDEFRAYFETYGPVSDAVIMIDQTTQRPRGFGFVSF-DSED----SVDLVLHKTFHDLN 176
Query: 172 NKKIEAKKAKAK 183
K++E K+A K
Sbjct: 177 GKQVEVKRALPK 188
Score = 43.5 bits (101), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 27/41 (65%)
Query: 610 LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
L+E+FS +GE+ VT+ + TGR RGF F+ F D +++
Sbjct: 22 LREYFSNFGEVLQVTVMREKATGRPRGFGFVAFSDPAVIDR 62
>gi|170586940|ref|XP_001898237.1| heterogeneous ribonuclear particle protein [Brugia malayi]
gi|158594632|gb|EDP33216.1| heterogeneous ribonuclear particle protein, putative [Brugia
malayi]
Length = 314
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 96/188 (51%), Gaps = 17/188 (9%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ T+E LKE +SK+G + + + DP T RSRGF F+ F +++ V+ +A
Sbjct: 35 GLTSSTTDETLKEFYSKWGTLVDCVVMRDPATKRSRGFGFVSFS-----KQSEVDAAMAN 89
Query: 166 GNHVINNKKIEAKKAKAK-----------SGKIFVGGLSPEMKDEEIKAHFAQFGNIIET 214
H+I+ K ++ K+A + S +++V G+ E ++ K HF ++GNI++
Sbjct: 90 RPHIIDGKTVDPKRAVPREQSQRSEANISSKRLYVSGVREEHTEDMFKEHFGKYGNILKC 149
Query: 215 EMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGVRGGRG 274
E+ DK+ + + F FITF+ V + IN+ DVKKA K E V+
Sbjct: 150 EIIADKNTGKPRGFAFITFDDYDAVDKCVLIKSHMINNYRCDVKKALSKEEMAKVQQQER 209
Query: 275 GRGGRGGR 282
R RG R
Sbjct: 210 ERMDRGAR 217
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 46/80 (57%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+F+GGL+ DE +K ++++G +++ + D + + + F F++F +S V + N
Sbjct: 30 KMFIGGLTSSTTDETLKEFYSKWGTLVDCVVMRDPATKRSRGFGFVSFSKQSEVDAAMAN 89
Query: 246 PKQKINDKEVDVKKATPKPE 265
I+ K VD K+A P+ +
Sbjct: 90 RPHIIDGKTVDPKRAVPREQ 109
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Query: 601 GIVDKITEEL-KEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFY 659
G+ ++ TE++ KEHF KYG I + +D NTG+ RGFAFI F D ++++K + +
Sbjct: 126 GVREEHTEDMFKEHFGKYGNILKCEIIADKNTGKPRGFAFITFDDYDAVDKCVLIKSHMI 185
Query: 660 SN 661
+N
Sbjct: 186 NN 187
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
G+ T+E LKE +SK+G + + + DP T RSRGF F+ F ++ A
Sbjct: 35 GLTSSTTDETLKEFYSKWGTLVDCVVMRDPATKRSRGFGFVSFSKQSEVDAA 86
>gi|356513961|ref|XP_003525676.1| PREDICTED: nuclear pore membrane glycoprotein 210-like [Glycine max]
Length = 2304
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 54/159 (33%), Positives = 84/159 (52%), Gaps = 16/159 (10%)
Query: 115 ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNKK 174
+ +HF KYGEI + + D TG+ RGF FI + D SV D + E H+IN K+
Sbjct: 1991 QFIKHFGKYGEITDSVIMKDRKTGQPRGFGFITYAD------PSVVDKVIEDPHIINGKQ 2044
Query: 175 IEAKKAKAKSG---------KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQR 225
+E K+ + KIFVGG+ + ++E + F ++G + + ++ D S ++
Sbjct: 2045 VEIKRTIPRGAVGSKDFRTKKIFVGGIPSNVTEDEFRDFFTRYGEVKDHQIMRDHSTNRS 2104
Query: 226 KNFCFITFEHESVVIDLLK-NPKQKINDKEVDVKKATPK 263
+ F FITF+ E V DLL K +V++KKA PK
Sbjct: 2105 RGFGFITFDSEEAVDDLLSMGNKIDFAGSQVEIKKAEPK 2143
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 51/86 (59%), Gaps = 1/86 (1%)
Query: 178 KKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHES 237
++ ++ KIF+GGL+ E + HF ++G I ++ + D+ Q + F FIT+ S
Sbjct: 1969 RRINPQNTKIFIGGLARETTIAQFIKHFGKYGEITDSVIMKDRKTGQPRGFGFITYADPS 2028
Query: 238 VVIDLLKNPKQKINDKEVDVKKATPK 263
VV ++++P IN K+V++K+ P+
Sbjct: 2029 VVDKVIEDP-HIINGKQVEIKRTIPR 2053
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 48/79 (60%), Gaps = 7/79 (8%)
Query: 107 GIVHKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
GI +TE E ++ F++YGE+++ + D +T RSRGF FI F E +V+D+++
Sbjct: 2070 GIPSNVTEDEFRDFFTRYGEVKDHQIMRDHSTNRSRGFGFITFDSEE-----AVDDLLSM 2124
Query: 166 GNHV-INNKKIEAKKAKAK 183
GN + ++E KKA+ K
Sbjct: 2125 GNKIDFAGSQVEIKKAEPK 2143
Score = 43.9 bits (102), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Query: 601 GIVDKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLE 649
GI +TE E ++ F++YGE+++ + D +T RSRGF FI F E+++
Sbjct: 2070 GIPSNVTEDEFRDFFTRYGEVKDHQIMRDHSTNRSRGFGFITFDSEEAVD 2119
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Query: 609 ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVED 655
+ +HF KYGEI + + D TG+ RGF FI + D ++K +ED
Sbjct: 1991 QFIKHFGKYGEITDSVIMKDRKTGQPRGFGFITYADPSVVDKV-IED 2036
>gi|356547342|ref|XP_003542073.1| PREDICTED: uncharacterized RNA-binding protein C660.15-like
[Glycine max]
Length = 353
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 114/220 (51%), Gaps = 37/220 (16%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
E +FSKYGE+ + + ++ +GR RGF F+ F ++ A ++V+A+ H I+++
Sbjct: 54 ESFFNYFSKYGEVTDSVIMTNKLSGRPRGFGFVTFANS-----AVADEVLAQ-EHTIDHR 107
Query: 174 KIEAKKAKA----------KSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKS 223
+E K+ K+ KIFVGG++ D+E++ +F+ +GN+IE ++ D +
Sbjct: 108 VVEVKRTVPREDVDVTGVFKTKKIFVGGIAQFFTDDELREYFSPYGNVIECQIMLDHNTG 167
Query: 224 QRKNFCFITFEHESVVIDLLKNPK-QKINDKEVDVKKATPK----------PEPFGVRG- 271
+ + F F+TF+ E V + K +I K+V++K+A PK + +G G
Sbjct: 168 RSRGFGFVTFDDEDSVEKVFSVGKIHEIGGKQVEIKRAEPKRSGVDYCNTSRKSYGGFGN 227
Query: 272 ---GRGGRGGR----GGRGGRMAGG--YGGYGGYGGGYGG 302
G GG R G RGG+ G G YG + G +GG
Sbjct: 228 EMDGHGGNSSRNRNHGKRGGQYTGSGMNGAYGHFDGSFGG 267
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 50/87 (57%), Gaps = 7/87 (8%)
Query: 99 KNKMVSHPGIVHKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 157
K K + GI T+ EL+E+FS YG + + D NTGRSRGF F+ F D +S+EK
Sbjct: 127 KTKKIFVGGIAQFFTDDELREYFSPYGNVIECQIMLDHNTGRSRGFGFVTFDDEDSVEKV 186
Query: 158 -SVEDVIAEGNHVINNKKIEAKKAKAK 183
SV + H I K++E K+A+ K
Sbjct: 187 FSVGKI-----HEIGGKQVEIKRAEPK 208
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 593 KNKMVSHPGIVDKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
K K + GI T+ EL+E+FS YG + + D NTGRSRGF F+ F D +S+EK
Sbjct: 127 KTKKIFVGGIAQFFTDDELREYFSPYGNVIECQIMLDHNTGRSRGFGFVTFDDEDSVEK 185
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 49/82 (59%), Gaps = 1/82 (1%)
Query: 184 SGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLL 243
SGK+FVGG+S E E +F+++G + ++ + +K + + F F+TF + +V ++L
Sbjct: 39 SGKLFVGGISWETSQESFFNYFSKYGEVTDSVIMTNKLSGRPRGFGFVTFANSAVADEVL 98
Query: 244 KNPKQKINDKEVDVKKATPKPE 265
+ I+ + V+VK+ P+ +
Sbjct: 99 AQ-EHTIDHRVVEVKRTVPRED 119
>gi|194741290|ref|XP_001953122.1| GF17368 [Drosophila ananassae]
gi|190626181|gb|EDV41705.1| GF17368 [Drosophila ananassae]
Length = 385
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 87/166 (52%), Gaps = 7/166 (4%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKAS------V 159
G+ ++ T+E LK HF K+G I +V + DP T RSRGF FI + + ++ A +
Sbjct: 30 GLDYRTTDEGLKAHFEKWGNIVDVVVMKDPKTKRSRGFGFITYSQSYMIDNAQNARPHKI 89
Query: 160 EDVIAEGNHVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYD 219
+ E + ++I+A A A K+FVGGL + +E ++ +F FG I+ + D
Sbjct: 90 DGRTVEPKRAVPRQEIDAPNAGATVKKLFVGGLRDDHDEECLREYFKDFGQIVGVNIVSD 149
Query: 220 KSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE 265
K +++ F FI F+ V ++ I +K +DVKKA K +
Sbjct: 150 KDTGKKRGFAFIEFDDYDPVDKIILQKNHTIKNKSLDVKKAIAKQD 195
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 50/81 (61%), Gaps = 2/81 (2%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+F+GGL DE +KAHF ++GNI++ + D + + F FIT+ +S +ID +N
Sbjct: 25 KLFIGGLDYRTTDEGLKAHFEKWGNIVDVVVMKDPKTKRSRGFGFITYS-QSYMIDNAQN 83
Query: 246 PK-QKINDKEVDVKKATPKPE 265
+ KI+ + V+ K+A P+ E
Sbjct: 84 ARPHKIDGRTVEPKRAVPRQE 104
Score = 45.8 bits (107), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
G+ D EE L+E+F +G+I V + SD +TG+ RGFAFI F D + ++K
Sbjct: 121 GLRDDHDEECLREYFKDFGQIVGVNIVSDKDTGKKRGFAFIEFDDYDPVDK 171
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 27/45 (60%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKAS 652
E LK HF K+G I +V + DP T RSRGF FI + + ++ A
Sbjct: 38 EGLKAHFEKWGNIVDVVVMKDPKTKRSRGFGFITYSQSYMIDNAQ 82
>gi|410730475|ref|XP_003671417.2| hypothetical protein NDAI_0G03970 [Naumovozyma dairenensis CBS 421]
gi|401780235|emb|CCD26174.2| hypothetical protein NDAI_0G03970 [Naumovozyma dairenensis CBS 421]
Length = 607
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 91/155 (58%), Gaps = 2/155 (1%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + TE+ L+ +F+KYG + + + D TGRSRGF F+ F+ S+++ I +
Sbjct: 203 GLNWETTEDGLRNYFNKYGNVIELKIMKDGATGRSRGFGFLTFEHPSSVDEVVKTQHILD 262
Query: 166 GNHVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQR 225
G VI+ K+ K+ + K GKIFVGG+ +++ +E + FAQFG II+ ++ DK +
Sbjct: 263 G-KVIDPKRSIPKEEQDKIGKIFVGGIGTDVRPKEFEEFFAQFGTIIDAQLMLDKDTGRS 321
Query: 226 KNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKA 260
+ F FIT++ V + +N K+++VK+A
Sbjct: 322 RGFGFITYDSADAVDKVCQNKYIDFKGKQIEVKRA 356
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 54/82 (65%), Gaps = 1/82 (1%)
Query: 184 SGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLL 243
S K+F+GGL+ E ++ ++ +F ++GN+IE ++ D + + + F F+TFEH S V +++
Sbjct: 196 SCKMFIGGLNWETTEDGLRNYFNKYGNVIELKIMKDGATGRSRGFGFLTFEHPSSVDEVV 255
Query: 244 KNPKQKINDKEVDVKKATPKPE 265
K + ++ K +D K++ PK E
Sbjct: 256 KT-QHILDGKVIDPKRSIPKEE 276
Score = 44.3 bits (103), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 39/70 (55%), Gaps = 5/70 (7%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+E +E F+++G I + L D +TGRSRGF FI + ++++K I K
Sbjct: 295 KEFEEFFAQFGTIIDAQLMLDKDTGRSRGFGFITYDSADAVDKVCQNKYID-----FKGK 349
Query: 174 KIEAKKAKAK 183
+IE K+A+ +
Sbjct: 350 QIEVKRAQQR 359
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 30/48 (62%)
Query: 603 VDKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D +E +E F+++G I + L D +TGRSRGF FI + ++++K
Sbjct: 290 TDVRPKEFEEFFAQFGTIIDAQLMLDKDTGRSRGFGFITYDSADAVDK 337
Score = 38.9 bits (89), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 27/41 (65%)
Query: 610 LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
L+ +F+KYG + + + D TGRSRGF F+ F+ S+++
Sbjct: 213 LRNYFNKYGNVIELKIMKDGATGRSRGFGFLTFEHPSSVDE 253
>gi|307110580|gb|EFN58816.1| hypothetical protein CHLNCDRAFT_56910 [Chlorella variabilis]
Length = 949
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 91/168 (54%), Gaps = 24/168 (14%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++L+ +F YG ++ + D +TGR RGF F+VF D + D + H I+ +
Sbjct: 20 QKLRAYFENYGTVQEAFVSYDKHTGRPRGFGFVVFADP------IIADKVISVQHTIDRR 73
Query: 174 KIEAKKA------------KAKSG-----KIFVGGLSPEMKDEEIKAHFAQFGNIIETEM 216
++EAKKA +A SG K+FVGGL+ + ++ +A+F +FG + + +
Sbjct: 74 EVEAKKALPKDESPVRKEEQAASGGHRTKKVFVGGLAATVDEDTFRAYFEEFGLVDDAVV 133
Query: 217 PYDKSKSQRKNFCFITF-EHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+D + + F FITF + ESV + Q I+DK++++K+A P+
Sbjct: 134 MFDHENKRPRGFGFITFADEESVDAVFARGTIQTIHDKQIEIKRAVPR 181
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 52/83 (62%), Gaps = 1/83 (1%)
Query: 183 KSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDL 242
+ GK+F+GGLS E D++++A+F +G + E + YDK + + F F+ F + ++ D
Sbjct: 4 QEGKVFIGGLSWETTDQKLRAYFENYGTVQEAFVSYDKHTGRPRGFGFVVFA-DPIIADK 62
Query: 243 LKNPKQKINDKEVDVKKATPKPE 265
+ + + I+ +EV+ KKA PK E
Sbjct: 63 VISVQHTIDRREVEAKKALPKDE 85
Score = 40.0 bits (92), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 24/37 (64%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKD 644
++L+ +F YG ++ + D +TGR RGF F+VF D
Sbjct: 20 QKLRAYFENYGTVQEAFVSYDKHTGRPRGFGFVVFAD 56
>gi|17136728|ref|NP_476869.1| heterogeneous nuclear ribonucleoprotein at 27C, isoform A
[Drosophila melanogaster]
gi|24582366|ref|NP_723228.1| heterogeneous nuclear ribonucleoprotein at 27C, isoform B
[Drosophila melanogaster]
gi|24582368|ref|NP_723229.1| heterogeneous nuclear ribonucleoprotein at 27C, isoform C
[Drosophila melanogaster]
gi|281364530|ref|NP_001162897.1| heterogeneous nuclear ribonucleoprotein at 27C, isoform D
[Drosophila melanogaster]
gi|281364532|ref|NP_001162898.1| heterogeneous nuclear ribonucleoprotein at 27C, isoform E
[Drosophila melanogaster]
gi|386769237|ref|NP_001245917.1| heterogeneous nuclear ribonucleoprotein at 27C, isoform F
[Drosophila melanogaster]
gi|386769239|ref|NP_001245918.1| heterogeneous nuclear ribonucleoprotein at 27C, isoform G
[Drosophila melanogaster]
gi|386769241|ref|NP_001245919.1| heterogeneous nuclear ribonucleoprotein at 27C, isoform H
[Drosophila melanogaster]
gi|76803817|sp|P48809.2|RB27C_DROME RecName: Full=Heterogeneous nuclear ribonucleoprotein 27C;
Short=Hrb27-C; AltName: Full=HRP48.1; AltName:
Full=hnRNP 48
gi|7297190|gb|AAF52456.1| heterogeneous nuclear ribonucleoprotein at 27C, isoform A
[Drosophila melanogaster]
gi|7297191|gb|AAF52457.1| heterogeneous nuclear ribonucleoprotein at 27C, isoform B
[Drosophila melanogaster]
gi|17862734|gb|AAL39844.1| LD46853p [Drosophila melanogaster]
gi|21711665|gb|AAM75023.1| GH26816p [Drosophila melanogaster]
gi|22945819|gb|AAN10605.1| heterogeneous nuclear ribonucleoprotein at 27C, isoform C
[Drosophila melanogaster]
gi|66804007|gb|AAY56657.1| heterogeneous nuclear ribonucleoprotein [Drosophila melanogaster]
gi|272406922|gb|ACZ94188.1| heterogeneous nuclear ribonucleoprotein at 27C, isoform D
[Drosophila melanogaster]
gi|272406923|gb|ACZ94189.1| heterogeneous nuclear ribonucleoprotein at 27C, isoform E
[Drosophila melanogaster]
gi|383291369|gb|AFH03591.1| heterogeneous nuclear ribonucleoprotein at 27C, isoform F
[Drosophila melanogaster]
gi|383291370|gb|AFH03592.1| heterogeneous nuclear ribonucleoprotein at 27C, isoform G
[Drosophila melanogaster]
gi|383291371|gb|AFH03593.1| heterogeneous nuclear ribonucleoprotein at 27C, isoform H
[Drosophila melanogaster]
Length = 421
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 99/198 (50%), Gaps = 25/198 (12%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + T+E L +F ++G+I + + + +GRSRGF F+ F D +V V+
Sbjct: 13 GLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFAD-----PTNVNHVLQN 67
Query: 166 GNHVINNKKIEAKKA------KAKSG---KIFVGGLSPEMKDEEIKAHFAQFGNIIETEM 216
G H ++ + I+ K K K G K+F+GGL + + +++ F ++G + E +
Sbjct: 68 GPHTLDGRTIDPKPCNPRTLQKPKKGGGYKVFLGGLPSNVTETDLRTFFNRYGKVTEVVI 127
Query: 217 PYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGVRGGRGGR 276
YD+ K + + F F++FE ES V + +N K+V++KKA P R G
Sbjct: 128 MYDQEKKKSRGFGFLSFEEESSVEHVTNERYINLNGKQVEIKKAEP----------RDGS 177
Query: 277 GGRGGRGGRMAGGYGGYG 294
GG+ + G YG G
Sbjct: 178 GGQNSNNSTVGGAYGKLG 195
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 44/79 (55%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GK+FVGGLS E E + +F +FG+II+ + + + + F F+TF + V +L+
Sbjct: 7 GKLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVLQ 66
Query: 245 NPKQKINDKEVDVKKATPK 263
N ++ + +D K P+
Sbjct: 67 NGPHTLDGRTIDPKPCNPR 85
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 41/85 (48%), Gaps = 10/85 (11%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGV 503
++ E + YD+ K + + F F++FE ES V + +N K+V++KKA P
Sbjct: 121 KVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNERYINLNGKQVEIKKAEP------- 173
Query: 504 RGGRGGRGGRGGRGGRMAGGYGGYG 528
R G GG+ + G YG G
Sbjct: 174 ---RDGSGGQNSNNSTVGGAYGKLG 195
Score = 38.9 bits (89), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 601 GIVDKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVE 654
G+ +TE +L+ F++YG++ V + D +SRGF F+ F++ S+E + E
Sbjct: 102 GLPSNVTETDLRTFFNRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNE 156
>gi|171451952|dbj|BAG15904.1| musashi [Dugesia japonica]
Length = 463
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 92/185 (49%), Gaps = 40/185 (21%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
E ++++F KYG+I+ + DP T RSRGF F+ F E +SV+ V+ + H++++K
Sbjct: 42 ETMRDYFRKYGDIKEFMIMRDPVTKRSRGFGFVTF-----FESSSVKKVLNKTPHILDSK 96
Query: 174 KIEAKKA-----------------------------------KAKSGKIFVGGLSPEMKD 198
KI+ K A K+ K+F+GG+S
Sbjct: 97 KIDPKVAVPRKVETSTKNCESSLDCIGINGYSTGKLGDSNMISTKTKKVFIGGISTNTTK 156
Query: 199 EEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVK 258
+E++ +F+QFG + E+ DK+ S+ + F F+TFE+E + +N+K V+ K
Sbjct: 157 QELEEYFSQFGILETCELMMDKATSRHRGFGFVTFENEDTAEKVCDIHFHDLNNKTVEAK 216
Query: 259 KATPK 263
KA PK
Sbjct: 217 KALPK 221
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 44/79 (55%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GK+F+GGLSP E ++ +F ++G+I E + D + + F F+TF S V +L
Sbjct: 28 GKMFIGGLSPTTSPETMRDYFRKYGDIKEFMIMRDPVTKRSRGFGFVTFFESSSVKKVLN 87
Query: 245 NPKQKINDKEVDVKKATPK 263
++ K++D K A P+
Sbjct: 88 KTPHILDSKKIDPKVAVPR 106
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 589 IVEAKNKMVSHPGIVDKIT-EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTES 647
++ K K V GI T +EL+E+FS++G +E L D T R RGF F+ F++ ++
Sbjct: 137 MISTKTKKVFIGGISTNTTKQELEEYFSQFGILETCELMMDKATSRHRGFGFVTFENEDT 196
Query: 648 LEKASVEDVYFY 659
EK V D++F+
Sbjct: 197 AEK--VCDIHFH 206
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 30/44 (68%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
E ++++F KYG+I+ + DP T RSRGF F+ F ++ S++K
Sbjct: 42 ETMRDYFRKYGDIKEFMIMRDPVTKRSRGFGFVTFFESSSVKKV 85
>gi|194901402|ref|XP_001980241.1| GG17033 [Drosophila erecta]
gi|190651944|gb|EDV49199.1| GG17033 [Drosophila erecta]
Length = 392
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 87/166 (52%), Gaps = 7/166 (4%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKAS------V 159
G+ ++ T++ LK HF K+G I +V + DP T RSRGF FI + + ++ A +
Sbjct: 30 GLDYRTTDDGLKAHFEKWGNIVDVVVMKDPKTKRSRGFGFITYSQSYMIDNAQNARPHKI 89
Query: 160 EDVIAEGNHVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYD 219
+ E + ++I+A A A K+FVGGL + +E ++ +F FG I+ + D
Sbjct: 90 DGRTVEPKRAVPRQEIDAPNAGATVKKLFVGGLRDDHDEECLREYFKDFGQIVGVNIVSD 149
Query: 220 KSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE 265
K +++ F FI F+ V ++ I +K +DVKKA K +
Sbjct: 150 KDTGKKRGFAFIEFDDYDPVDKIILQKNHTIKNKSLDVKKAIAKQD 195
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 50/81 (61%), Gaps = 2/81 (2%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+F+GGL D+ +KAHF ++GNI++ + D + + F FIT+ +S +ID +N
Sbjct: 25 KLFIGGLDYRTTDDGLKAHFEKWGNIVDVVVMKDPKTKRSRGFGFITYS-QSYMIDNAQN 83
Query: 246 PK-QKINDKEVDVKKATPKPE 265
+ KI+ + V+ K+A P+ E
Sbjct: 84 ARPHKIDGRTVEPKRAVPRQE 104
Score = 46.2 bits (108), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
G+ D EE L+E+F +G+I V + SD +TG+ RGFAFI F D + ++K
Sbjct: 121 GLRDDHDEECLREYFKDFGQIVGVNIVSDKDTGKKRGFAFIEFDDYDPVDK 171
Score = 43.9 bits (102), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 26/43 (60%)
Query: 610 LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKAS 652
LK HF K+G I +V + DP T RSRGF FI + + ++ A
Sbjct: 40 LKAHFEKWGNIVDVVVMKDPKTKRSRGFGFITYSQSYMIDNAQ 82
>gi|15226106|ref|NP_180899.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|2459445|gb|AAB80680.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|22530920|gb|AAM96964.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|23198416|gb|AAN15735.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|330253737|gb|AEC08831.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 404
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 89/173 (51%), Gaps = 31/173 (17%)
Query: 116 LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNKKI 175
L+E+FS +GE+ VT+ + TGR RGF F+ F D +V D + + H I+N+ +
Sbjct: 22 LREYFSNFGEVLQVTVMREKATGRPRGFGFVAFSDP------AVIDRVLQDKHHIDNRDV 75
Query: 176 EAKKA--------KAKSG-----------------KIFVGGLSPEMKDEEIKAHFAQFGN 210
+ K+A +SG KIFVGGL P + +E +A+F +G
Sbjct: 76 DVKRAMSREEQSPAGRSGTFNASRNFDSGANVRTKKIFVGGLPPALTSDEFRAYFETYGP 135
Query: 211 IIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ + + D++ + + F F++F+ E V +L +N K+V+VK+A PK
Sbjct: 136 VSDAVIMIDQTTQRPRGFGFVSFDSEDSVDLVLHKTFHDLNGKQVEVKRALPK 188
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 52/85 (61%), Gaps = 1/85 (1%)
Query: 181 KAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVI 240
++ GK+F+GG+S + + ++ +F+ FG +++ + +K+ + + F F+ F + VI
Sbjct: 2 ESDQGKLFIGGISWDTDENLLREYFSNFGEVLQVTVMREKATGRPRGFGFVAFS-DPAVI 60
Query: 241 DLLKNPKQKINDKEVDVKKATPKPE 265
D + K I++++VDVK+A + E
Sbjct: 61 DRVLQDKHHIDNRDVDVKRAMSREE 85
Score = 44.3 bits (103), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 40/72 (55%), Gaps = 5/72 (6%)
Query: 112 ITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVIN 171
++E + +F YG + + + D T R RGF F+ F D+E SV+ V+ + H +N
Sbjct: 122 TSDEFRAYFETYGPVSDAVIMIDQTTQRPRGFGFVSF-DSED----SVDLVLHKTFHDLN 176
Query: 172 NKKIEAKKAKAK 183
K++E K+A K
Sbjct: 177 GKQVEVKRALPK 188
Score = 43.5 bits (101), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 27/41 (65%)
Query: 610 LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
L+E+FS +GE+ VT+ + TGR RGF F+ F D +++
Sbjct: 22 LREYFSNFGEVLQVTVMREKATGRPRGFGFVAFSDPAVIDR 62
>gi|393911995|gb|EJD76539.1| heterogeneous ribonuclear particle protein, variant [Loa loa]
Length = 317
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 96/188 (51%), Gaps = 17/188 (9%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ T+E LKE +SK+G + + + DP T RSRGF F+ F +++ V+ +A
Sbjct: 27 GLTSSTTDETLKEFYSKWGTLVDCVVMRDPATKRSRGFGFVSFS-----KQSEVDAAMAN 81
Query: 166 GNHVINNKKIEAKKAKAK-----------SGKIFVGGLSPEMKDEEIKAHFAQFGNIIET 214
H+I+ K ++ K+A + S +++V G+ E ++ K HF ++GNI++
Sbjct: 82 RPHIIDGKTVDPKRAVPREQSQRSEANISSKRLYVSGVREEHTEDMFKEHFGKYGNILKC 141
Query: 215 EMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGVRGGRG 274
E+ DK+ + + F FITF+ V + IN+ DVKKA K E V+
Sbjct: 142 EIIADKNTGKPRGFAFITFDDYDAVDKCVLIKSHMINNYRCDVKKALSKEEMAKVQQQER 201
Query: 275 GRGGRGGR 282
R RG R
Sbjct: 202 ERMDRGAR 209
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Query: 601 GIVDKITEEL-KEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFY 659
G+ ++ TE++ KEHF KYG I + +D NTG+ RGFAFI F D ++++K + +
Sbjct: 118 GVREEHTEDMFKEHFGKYGNILKCEIIADKNTGKPRGFAFITFDDYDAVDKCVLIKSHMI 177
Query: 660 SN 661
+N
Sbjct: 178 NN 179
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 46/80 (57%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+F+GGL+ DE +K ++++G +++ + D + + + F F++F +S V + N
Sbjct: 22 KMFIGGLTSSTTDETLKEFYSKWGTLVDCVVMRDPATKRSRGFGFVSFSKQSEVDAAMAN 81
Query: 246 PKQKINDKEVDVKKATPKPE 265
I+ K VD K+A P+ +
Sbjct: 82 RPHIIDGKTVDPKRAVPREQ 101
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
G+ T+E LKE +SK+G + + + DP T RSRGF F+ F ++ A
Sbjct: 27 GLTSSTTDETLKEFYSKWGTLVDCVVMRDPATKRSRGFGFVSFSKQSEVDAA 78
>gi|393911994|gb|EFO20372.2| heterogeneous ribonuclear particle protein [Loa loa]
Length = 344
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 96/188 (51%), Gaps = 17/188 (9%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ T+E LKE +SK+G + + + DP T RSRGF F+ F +++ V+ +A
Sbjct: 27 GLTSSTTDETLKEFYSKWGTLVDCVVMRDPATKRSRGFGFVSFS-----KQSEVDAAMAN 81
Query: 166 GNHVINNKKIEAKKAKAK-----------SGKIFVGGLSPEMKDEEIKAHFAQFGNIIET 214
H+I+ K ++ K+A + S +++V G+ E ++ K HF ++GNI++
Sbjct: 82 RPHIIDGKTVDPKRAVPREQSQRSEANISSKRLYVSGVREEHTEDMFKEHFGKYGNILKC 141
Query: 215 EMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGVRGGRG 274
E+ DK+ + + F FITF+ V + IN+ DVKKA K E V+
Sbjct: 142 EIIADKNTGKPRGFAFITFDDYDAVDKCVLIKSHMINNYRCDVKKALSKEEMAKVQQQER 201
Query: 275 GRGGRGGR 282
R RG R
Sbjct: 202 ERMDRGAR 209
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Query: 601 GIVDKITEEL-KEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFY 659
G+ ++ TE++ KEHF KYG I + +D NTG+ RGFAFI F D ++++K + +
Sbjct: 118 GVREEHTEDMFKEHFGKYGNILKCEIIADKNTGKPRGFAFITFDDYDAVDKCVLIKSHMI 177
Query: 660 SN 661
+N
Sbjct: 178 NN 179
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 46/80 (57%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+F+GGL+ DE +K ++++G +++ + D + + + F F++F +S V + N
Sbjct: 22 KMFIGGLTSSTTDETLKEFYSKWGTLVDCVVMRDPATKRSRGFGFVSFSKQSEVDAAMAN 81
Query: 246 PKQKINDKEVDVKKATPKPE 265
I+ K VD K+A P+ +
Sbjct: 82 RPHIIDGKTVDPKRAVPREQ 101
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
G+ T+E LKE +SK+G + + + DP T RSRGF F+ F ++ A
Sbjct: 27 GLTSSTTDETLKEFYSKWGTLVDCVVMRDPATKRSRGFGFVSFSKQSEVDAA 78
>gi|402887861|ref|XP_003907299.1| PREDICTED: RNA-binding protein Musashi homolog 1 [Papio anubis]
Length = 637
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 52/139 (37%), Positives = 81/139 (58%), Gaps = 14/139 (10%)
Query: 134 DPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNKKIEAK---------KAKAKS 184
DP T RSRGF F+ F D +A V+ V+A+ H +++K I+ K K ++
Sbjct: 329 DPLTKRSRGFGFVTFMD-----QAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVTRT 383
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
KIFVGGLS E++K +F QFG + + + +DK+ ++ + F F+TFE E +V + +
Sbjct: 384 KKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 443
Query: 245 NPKQKINDKEVDVKKATPK 263
+IN+K V+ KKA PK
Sbjct: 444 IHFHEINNKMVECKKAQPK 462
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 44/75 (58%), Gaps = 5/75 (6%)
Query: 109 VHKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNH 168
V+ E++K++F ++G++++ L D T R RGF F+ F+ + +EK V H
Sbjct: 393 VNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEK-----VCEIHFH 447
Query: 169 VINNKKIEAKKAKAK 183
INNK +E KKA+ K
Sbjct: 448 EINNKMVECKKAQPK 462
Score = 44.7 bits (104), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 50/92 (54%), Gaps = 9/92 (9%)
Query: 575 HYLFDQNLRTHYFYIVEAKNKMVSHP------GI-VDKITEELKEHFSKYGEIENVTLKS 627
H L + + + A+ KMV+ G+ V+ E++K++F ++G++++ L
Sbjct: 358 HELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMF 417
Query: 628 DPNTGRSRGFAFIVFKDTESLEKASVEDVYFY 659
D T R RGF F+ F+ + +EK V +++F+
Sbjct: 418 DKTTNRHRGFGFVTFESEDIVEK--VCEIHFH 447
Score = 40.4 bits (93), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 30/46 (65%)
Query: 452 YDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 497
+DK+ ++ + F F+TFE E +V + + +IN+K V+ KKA PK
Sbjct: 417 FDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPK 462
>gi|452822947|gb|EME29962.1| heterogeneous nuclear ribonucleoprotein A1/A3 [Galdieria
sulphuraria]
Length = 368
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 91/170 (53%), Gaps = 19/170 (11%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + TEE L+++F YG + + + D +TG RGF F+ F+ ES ++A+ +
Sbjct: 56 GLSWETTEETLQKYFESYGRVLDCVIMRDKHTGHPRGFGFVTFEKEESADRAATK----- 110
Query: 166 GNHVINNKKIEAKKAKAKS------------GKIFVGGLSPEMKDEEIKAHFAQFGNIIE 213
H ++ +++EAKKA K+ KIFVGGL +E+ +F + G+++E
Sbjct: 111 -RHELDGRQVEAKKAVPKAEYITRSQVTKPTRKIFVGGLPLSCTEEDFMEYFERLGHVVE 169
Query: 214 TEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ YD + F F+TF E +V + + + +I K V+VKKA PK
Sbjct: 170 AHIMYDHQTGISRGFGFVTFSSEDMVEKVFEQSQHEIKGKIVEVKKAEPK 219
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVE 654
G+ + TEE L+++F YG + + + D +TG RGF F+ F+ ES ++A+ +
Sbjct: 56 GLSWETTEETLQKYFESYGRVLDCVIMRDKHTGHPRGFGFVTFEKEESADRAATK 110
>gi|11042|emb|CAA44505.1| hrp48.1 [Drosophila melanogaster]
Length = 385
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 99/198 (50%), Gaps = 25/198 (12%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + T+E L +F ++G+I + + + +GRSRGF F+ F D +V V+
Sbjct: 13 GLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFAD-----PTNVNHVLQN 67
Query: 166 GNHVINNKKIEAKKA------KAKSG---KIFVGGLSPEMKDEEIKAHFAQFGNIIETEM 216
G H ++ + I+ K K K G K+F+GGL + + +++ F ++G + E +
Sbjct: 68 GPHTLDGRTIDPKPCNPRTLQKPKKGGGYKVFLGGLPSNVTETDLRTFFNRYGKVTEVVI 127
Query: 217 PYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGVRGGRGGR 276
YD+ K + + F F++FE ES V + +N K+V++KKA P R G
Sbjct: 128 MYDQEKKKSRGFGFLSFEEESSVEHVTNERYINLNGKQVEIKKAEP----------RDGS 177
Query: 277 GGRGGRGGRMAGGYGGYG 294
GG+ + G YG G
Sbjct: 178 GGQNSNNSTVGGAYGKLG 195
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 44/79 (55%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GK+FVGGLS E E + +F +FG+II+ + + + + F F+TF + V +L+
Sbjct: 7 GKLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVLQ 66
Query: 245 NPKQKINDKEVDVKKATPK 263
N ++ + +D K P+
Sbjct: 67 NGPHTLDGRTIDPKPCNPR 85
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 41/85 (48%), Gaps = 10/85 (11%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGV 503
++ E + YD+ K + + F F++FE ES V + +N K+V++KKA P
Sbjct: 121 KVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNERYINLNGKQVEIKKAEP------- 173
Query: 504 RGGRGGRGGRGGRGGRMAGGYGGYG 528
R G GG+ + G YG G
Sbjct: 174 ---RDGSGGQNSNNSTVGGAYGKLG 195
Score = 40.4 bits (93), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 79/188 (42%), Gaps = 29/188 (15%)
Query: 107 GIVHKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ +TE +L+ F++YG++ V + D +SRGF F+ F+ E++SVE V E
Sbjct: 102 GLPSNVTETDLRTFFNRYGKVTEVVIMYDQEKKKSRGFGFLSFE-----EESSVEHVTNE 156
Query: 166 GNHVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQR 225
+N K++E KKA+ + G GG + + + + + GN P+
Sbjct: 157 RYINLNGKQVEIKKAEPRDGS---GGQN--SNNSTVGGAYGKLGNECSHWGPHH------ 205
Query: 226 KNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGVRGGRGGRGGRGGRGGR 285
I++++ ++ +++ P P G + + G G
Sbjct: 206 ------------APINMMQGQNGQMGGPPLNMPIGAPNMMPGYQGWGTSPQQQQYGYGNS 253
Query: 286 MAGGYGGY 293
G Y G+
Sbjct: 254 GPGSYQGW 261
Score = 38.9 bits (89), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 601 GIVDKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVE 654
G+ +TE +L+ F++YG++ V + D +SRGF F+ F++ S+E + E
Sbjct: 102 GLPSNVTETDLRTFFNRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNE 156
>gi|298708562|emb|CBJ30647.1| RNA-binding protein, putative [Ectocarpus siliculosus]
Length = 462
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 94/196 (47%), Gaps = 42/196 (21%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + TE+ LK HF K+G + +V L + TG RGF F+ F+++ S + A E+
Sbjct: 67 GLTWQTTEDMLKTHFGKWGALNDVILMRNKITGEPRGFGFVQFQESTSADAALKEE---- 122
Query: 166 GNHVINNKKIEAKK------------------AKAKSG-----------------KIFVG 190
HVI+ + I+ K+ A A+ G KIFVG
Sbjct: 123 --HVIDGRTIDVKRAVPRDRAPLPRAAADRNSANARGGSQVGGRHGGMNDAPLTNKIFVG 180
Query: 191 GLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKI 250
GL E+ D + + +FA+FG + + + YDK + + F FIT++ +V ++ ++
Sbjct: 181 GLDQEVNDADFRGYFAKFGKVEDAVVMYDKKTGRSRGFGFITYDSPDIVRKVMSGGTHEL 240
Query: 251 NDKEVDVKKATPKPEP 266
K V+VK A P+ P
Sbjct: 241 KGKSVEVKTAAPRDGP 256
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 56/109 (51%), Gaps = 8/109 (7%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GKIF+GGL+ + ++ +K HF ++G + + + +K + + F F+ F+ ES D
Sbjct: 61 GKIFLGGLTWQTTEDMLKTHFGKWGALNDVILMRNKITGEPRGFGFVQFQ-ESTSADAAL 119
Query: 245 NPKQKINDKEVDVKKATPK-----PEPFGVRGGRGGRGGR--GGRGGRM 286
+ I+ + +DVK+A P+ P R RGG GGR G M
Sbjct: 120 KEEHVIDGRTIDVKRAVPRDRAPLPRAAADRNSANARGGSQVGGRHGGM 168
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVED 655
G+ + TE+ LK HF K+G + +V L + TG RGF F+ F+++ S + A E+
Sbjct: 67 GLTWQTTEDMLKTHFGKWGALNDVILMRNKITGEPRGFGFVQFQESTSADAALKEE 122
Score = 39.3 bits (90), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 27/42 (64%)
Query: 609 ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+ + +F+K+G++E+ + D TGRSRGF FI + + + K
Sbjct: 190 DFRGYFAKFGKVEDAVVMYDKKTGRSRGFGFITYDSPDIVRK 231
>gi|295673172|ref|XP_002797132.1| heterogeneous nuclear ribonucleoprotein A1 [Paracoccidioides sp.
'lutzii' Pb01]
gi|226282504|gb|EEH38070.1| heterogeneous nuclear ribonucleoprotein A1 [Paracoccidioides sp.
'lutzii' Pb01]
Length = 642
Score = 92.4 bits (228), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 92/189 (48%), Gaps = 40/189 (21%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVED------------ 161
+ LK++FS++GE++ T+ D TGRSRGF F+ FKD +++ V++
Sbjct: 105 QSLKDYFSQFGEVQECTVMRDGATGRSRGFGFLTFKDPKTVNTVMVKEHYLDGKIVGISF 164
Query: 162 ---------------------------VIAEGNHVINNKKIEAKKAKAKSGKIFVGGLSP 194
+ +G I+ K+ + + ++ KIFVGG+S
Sbjct: 165 CNHYPQAKQAENTAPIWRASKLRLRASRLTKGTQQIDPKRAIPRDEQERTSKIFVGGVSQ 224
Query: 195 EMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKE 254
E +++ K F QFG +++ + DK + + F F+TF+ E+ V L P + I K
Sbjct: 225 EATEQDFKQFFMQFGRVVDATLMIDKDSGRPRGFGFVTFDSEAAVEATLSGPLE-ILGKP 283
Query: 255 VDVKKATPK 263
++VKKA P+
Sbjct: 284 IEVKKAQPR 292
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 35/51 (68%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYF 658
+ LK++FS++GE++ T+ D TGRSRGF F+ FKD +++ V++ Y
Sbjct: 105 QSLKDYFSQFGEVQECTVMRDGATGRSRGFGFLTFKDPKTVNTVMVKEHYL 155
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 35/58 (60%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLL 243
K+F+GGL+ E D+ +K +F+QFG + E + D + + + F F+TF+ V ++
Sbjct: 92 KMFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDGATGRSRGFGFLTFKDPKTVNTVM 149
Score = 40.0 bits (92), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 35/54 (64%), Gaps = 2/54 (3%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASV 653
G+ + TE+ K+ F ++G + + TL D ++GR RGF F+ F D+E+ +A++
Sbjct: 221 GVSQEATEQDFKQFFMQFGRVVDATLMIDKDSGRPRGFGFVTF-DSEAAVEATL 273
>gi|403415424|emb|CCM02124.1| predicted protein [Fibroporia radiculosa]
Length = 532
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 95/165 (57%), Gaps = 3/165 (1%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ T+E L+++FS++G++E+ T+ D + GRSRGFAF+ F+D S+ V + I +
Sbjct: 127 GLSWDTTDEGLRKYFSEFGKVEDCTILRD-HDGRSRGFAFLTFEDPSSVNAVMVREHILD 185
Query: 166 GNHVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQR 225
G I+ K+ ++ ++ + FVGGLS + ++A F+ +G +++ + D+ +
Sbjct: 186 GK-AIDPKRAIPREEHLRNTRYFVGGLSHATTSDSMRAFFSAYGKVVDCTVMVDRESGRS 244
Query: 226 KNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGVR 270
K F F+TFE S L+ ++DK ++VK A P+ + VR
Sbjct: 245 KGFGFVTFEDASNTDQLVGRGDLILDDKMIEVKVAQPRSQRDQVR 289
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GK+FVGGLS + DE ++ +F++FG + + + D R F F+TFE S V ++
Sbjct: 121 GKLFVGGLSWDTTDEGLRKYFSEFGKVEDCTILRDHDGRSR-GFAFLTFEDPSSVNAVMV 179
Query: 245 NPKQKINDKEVDVKKATPKPE 265
+ ++ K +D K+A P+ E
Sbjct: 180 R-EHILDGKAIDPKRAIPREE 199
Score = 45.8 bits (107), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVED 655
D E L+++FS++G++E+ T+ D + GRSRGFAF+ F+D S+ V +
Sbjct: 131 DTTDEGLRKYFSEFGKVEDCTILRD-HDGRSRGFAFLTFEDPSSVNAVMVRE 181
Score = 39.7 bits (91), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 29/44 (65%)
Query: 607 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
++ ++ FS YG++ + T+ D +GRS+GF F+ F+D + ++
Sbjct: 217 SDSMRAFFSAYGKVVDCTVMVDRESGRSKGFGFVTFEDASNTDQ 260
>gi|413925207|gb|AFW65139.1| hypothetical protein ZEAMMB73_790427, partial [Zea mays]
Length = 221
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 76/139 (54%), Gaps = 17/139 (12%)
Query: 118 EHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNKKIEA 177
HF +YGEI + + D +T + RGF FI + D +V D + E NHVIN K++E
Sbjct: 43 RHFGQYGEIVDSVIMKDRHTSQPRGFGFITYSD------PAVVDKVIEDNHVINGKQVEI 96
Query: 178 KKA-----------KAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRK 226
K+ K+ KIFVGGL + ++E K+ FA++G +++ ++ +D + +
Sbjct: 97 KRTIPKGSVQSSSKDFKTKKIFVGGLPSTLTEDEFKSFFARYGTVVDHQIMFDHETKRSR 156
Query: 227 NFCFITFEHESVVIDLLKN 245
F FI F E VV DLL N
Sbjct: 157 GFGFIVFASEQVVDDLLAN 175
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GKIFVGGL + D HF Q+G I+++ + D+ SQ + F FIT+ +VV +++
Sbjct: 25 GKIFVGGLPRDTTDATFVRHFGQYGEIVDSVIMKDRHTSQPRGFGFITYSDPAVVDKVIE 84
Query: 245 NPKQKINDKEVDVKKATPK 263
+ IN K+V++K+ PK
Sbjct: 85 D-NHVINGKQVEIKRTIPK 102
Score = 43.1 bits (100), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 39/72 (54%), Gaps = 6/72 (8%)
Query: 99 KNKMVSHPGIVHKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 157
K K + G+ +TE E K F++YG + + + D T RSRGF FIVF +
Sbjct: 113 KTKKIFVGGLPSTLTEDEFKSFFARYGTVVDHQIMFDHETKRSRGFGFIVFASEQ----- 167
Query: 158 SVEDVIAEGNHV 169
V+D++A GN V
Sbjct: 168 VVDDLLANGNMV 179
>gi|346469143|gb|AEO34416.1| hypothetical protein [Amblyomma maculatum]
Length = 314
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 93/180 (51%), Gaps = 29/180 (16%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + T+E L +FS++GE+ + + + TGRSRGF F+ F+D + V V+A
Sbjct: 15 GLSWETTQESLLNYFSRFGEVVDCVVMCN-ETGRSRGFGFVTFRD-----PSCVATVLAG 68
Query: 166 GNHVINNKKIEAK----------------------KAKAKSGKIFVGGLSPEMKDEEIKA 203
G H ++ + ++ K + K S KIFVGGL + + ++ A
Sbjct: 69 GPHQLDGRTVDPKSCNPRGASRPGGGGGGPGARGVRTKGSSTKIFVGGLPATVTETDLHA 128
Query: 204 HFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
F+++G + ET + YD+ + + + F FI+FE E V L I+ K+V+ K+A PK
Sbjct: 129 FFSEYGKVTETLIMYDQEQRRSRGFGFISFESEEPVNQLTAQRYVDISGKQVECKRAEPK 188
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 179 KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESV 238
+ + GKIFVGGLS E E + +F++FG +++ + +++ R F F+TF S
Sbjct: 3 RQNEEQGKIFVGGLSWETTQESLLNYFSRFGEVVDCVVMCNETGRSR-GFGFVTFRDPSC 61
Query: 239 VIDLLKNPKQKINDKEVDVKKATP 262
V +L +++ + VD K P
Sbjct: 62 VATVLAGGPHQLDGRTVDPKSCNP 85
Score = 40.0 bits (92), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 31/54 (57%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 497
++ ET + YD+ + + + F FI+FE E V L I+ K+V+ K+A PK
Sbjct: 135 KVTETLIMYDQEQRRSRGFGFISFESEEPVNQLTAQRYVDISGKQVECKRAEPK 188
>gi|76153568|gb|AAX25192.2| SJCHGC06941 protein [Schistosoma japonicum]
Length = 192
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 96/165 (58%), Gaps = 14/165 (8%)
Query: 107 GIVHKIT--EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIA 164
G +H+ T + LK +FSK+G+IE T+ D TGRSRGF ++ FK+ ES V+ V+
Sbjct: 16 GGLHQSTTNDSLKLYFSKFGDIEESTVMMDNRTGRSRGFGYVKFKNDES-----VDWVLR 70
Query: 165 EGNHVINNKKIEAKKAKA-------KSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMP 217
+ H+I+ K+++ K+ +S K+FVGG++ + + I+ F+ +G + + +
Sbjct: 71 QKTHLIDLKEVDPKRCNVNMKGKNRRSLKVFVGGIAFDHDENIIRNFFSSYGRVTDVNLL 130
Query: 218 YDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATP 262
++K + + F F+ FE E VV +L+K +N K+V++K P
Sbjct: 131 AGQTKPRHRGFAFVGFEDEEVVRNLIKLHYLNLNGKQVEIKAMKP 175
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 45/77 (58%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GK+FVGGL ++ +K +F++FG+I E+ + D + + F ++ F+++ V +L+
Sbjct: 11 GKLFVGGLHQSTTNDSLKLYFSKFGDIEESTVMMDNRTGRSRGFGYVKFKNDESVDWVLR 70
Query: 245 NPKQKINDKEVDVKKAT 261
I+ KEVD K+
Sbjct: 71 QKTHLIDLKEVDPKRCN 87
Score = 47.4 bits (111), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 31/43 (72%)
Query: 607 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLE 649
+ LK +FSK+G+IE T+ D TGRSRGF ++ FK+ ES++
Sbjct: 24 NDSLKLYFSKFGDIEESTVMMDNRTGRSRGFGYVKFKNDESVD 66
>gi|356558851|ref|XP_003547716.1| PREDICTED: RNA-binding protein Musashi homolog Rbp6-like [Glycine
max]
Length = 372
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 87/165 (52%), Gaps = 19/165 (11%)
Query: 115 ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNKK 174
+ +HF KYGEI + + D TG+ RGF FI + D SV D + E H+IN K+
Sbjct: 57 QFIKHFGKYGEITDSVIMKDRKTGQPRGFGFITYAD------PSVVDTVIEDTHIINGKQ 110
Query: 175 IEAKKAKAKSG-----------KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKS 223
+E K+ + KIFVGG+ + ++E + F ++G + + ++ D S +
Sbjct: 111 VEIKRTIPRGAVGSNSKDFRTKKIFVGGIPSTVTEDEFRDFFTRYGEVKDHQIMRDHSTN 170
Query: 224 QRKNFCFITFEHESVVIDLLK-NPKQKINDKEVDVKKATP-KPEP 266
+ + F FIT++ E V DLL K + +V++KKA P KP P
Sbjct: 171 RSRGFGFITYDSEEAVDDLLSVGNKIEFAGAQVEIKKAEPKKPNP 215
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 182 AKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVID 241
A GKIF+GGL+ E + HF ++G I ++ + D+ Q + F FIT+ SVV
Sbjct: 39 ASPGKIFIGGLARETTIAQFIKHFGKYGEITDSVIMKDRKTGQPRGFGFITYADPSVVDT 98
Query: 242 LLKNPKQKINDKEVDVKKATPK 263
++++ IN K+V++K+ P+
Sbjct: 99 VIED-THIINGKQVEIKRTIPR 119
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 48/79 (60%), Gaps = 7/79 (8%)
Query: 107 GIVHKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
GI +TE E ++ F++YGE+++ + D +T RSRGF FI + E +V+D+++
Sbjct: 138 GIPSTVTEDEFRDFFTRYGEVKDHQIMRDHSTNRSRGFGFITYDSEE-----AVDDLLSV 192
Query: 166 GNHV-INNKKIEAKKAKAK 183
GN + ++E KKA+ K
Sbjct: 193 GNKIEFAGAQVEIKKAEPK 211
Score = 42.4 bits (98), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Query: 601 GIVDKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLE 649
GI +TE E ++ F++YGE+++ + D +T RSRGF FI + E+++
Sbjct: 138 GIPSTVTEDEFRDFFTRYGEVKDHQIMRDHSTNRSRGFGFITYDSEEAVD 187
Score = 39.7 bits (91), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 609 ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVY 657
+ +HF KYGEI + + D TG+ RGF FI + D ++ +ED +
Sbjct: 57 QFIKHFGKYGEITDSVIMKDRKTGQPRGFGFITYADPSVVDTV-IEDTH 104
>gi|147903976|ref|NP_001087778.1| MGC84815 protein [Xenopus laevis]
gi|51703946|gb|AAH81212.1| MGC84815 protein [Xenopus laevis]
Length = 291
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 92/170 (54%), Gaps = 16/170 (9%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ K E+ L+ ++S++GEI +V + DP + +SRGF F+ FK+ S++KA A+
Sbjct: 19 GLNPKTNEDSLRAYYSQWGEITDVVVMKDPRSNKSRGFGFVTFKEASSVDKAQ-----AD 73
Query: 166 GNHVINNKKIEAKKA----------KAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETE 215
H ++ K +++K+A A KIFVGGL ++ +E++ +F +FGN+ +
Sbjct: 74 RPHKVDGKDVDSKRAMPREETSPEVHAAVKKIFVGGLKKDVTNEDLAEYFGKFGNVTDAS 133
Query: 216 MPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE 265
+ K + + F F+TF+ V ++ I + DV+KA + E
Sbjct: 134 IVVAKDTNTSRGFAFVTFDDTDSVDKVILARPHMIGGHKADVRKALSREE 183
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 50/80 (62%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+FVGGL+P+ ++ ++A+++Q+G I + + D ++ + F F+TF+ S V +
Sbjct: 14 KLFVGGLNPKTNEDSLRAYYSQWGEITDVVVMKDPRSNKSRGFGFVTFKEASSVDKAQAD 73
Query: 246 PKQKINDKEVDVKKATPKPE 265
K++ K+VD K+A P+ E
Sbjct: 74 RPHKVDGKDVDSKRAMPREE 93
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVE 654
G+ K E+ L+ ++S++GEI +V + DP + +SRGF F+ FK+ S++KA +
Sbjct: 19 GLNPKTNEDSLRAYYSQWGEITDVVVMKDPRSNKSRGFGFVTFKEASSVDKAQAD 73
Score = 46.2 bits (108), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
D E+L E+F K+G + + ++ +T SRGFAF+ F DT+S++K
Sbjct: 113 DVTNEDLAEYFGKFGNVTDASIVVAKDTNTSRGFAFVTFDDTDSVDK 159
>gi|225460542|ref|XP_002277226.1| PREDICTED: RNA-binding protein Musashi homolog 2 [Vitis vinifera]
Length = 348
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 84/158 (53%), Gaps = 16/158 (10%)
Query: 116 LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNKKI 175
+HF KYGEI + + D TG+ RGF F+ + D SV D + E HVIN K++
Sbjct: 35 FNKHFEKYGEITDSVIMKDRYTGQPRGFGFVTYAD------PSVVDSVIEDTHVINGKQV 88
Query: 176 EAKKA---------KAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRK 226
E K+ K+ KIFVGGL + ++E K F+++G + E ++ D ++ +
Sbjct: 89 EIKRTIPKGSGQSKDFKTKKIFVGGLPSTVTEDEFKDFFSKYGKVEEHQIIRDHETNRSR 148
Query: 227 NFCFITFEHESVVIDLLKNPKQ-KINDKEVDVKKATPK 263
F FI FE E VV ++L + +V++KKA PK
Sbjct: 149 GFGFIIFESEEVVDEILSEGNMIDMAGTQVEIKKAEPK 186
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Query: 182 AKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVID 241
A GKIF+GGL+ + HF ++G I ++ + D+ Q + F F+T+ SVV
Sbjct: 16 ASPGKIFIGGLAKDTTYAAFNKHFEKYGEITDSVIMKDRYTGQPRGFGFVTYADPSVVDS 75
Query: 242 LLKNPKQKINDKEVDVKKATPK 263
++++ IN K+V++K+ PK
Sbjct: 76 VIED-THVINGKQVEIKRTIPK 96
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 52/87 (59%), Gaps = 7/87 (8%)
Query: 99 KNKMVSHPGIVHKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 157
K K + G+ +TE E K+ FSKYG++E + D T RSRGF FI+F+ E
Sbjct: 105 KTKKIFVGGLPSTVTEDEFKDFFSKYGKVEEHQIIRDHETNRSRGFGFIIFESEE----- 159
Query: 158 SVEDVIAEGNHV-INNKKIEAKKAKAK 183
V+++++EGN + + ++E KKA+ K
Sbjct: 160 VVDEILSEGNMIDMAGTQVEIKKAEPK 186
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 593 KNKMVSHPGIVDKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
K K + G+ +TE E K+ FSKYG++E + D T RSRGF FI+F+ E +++
Sbjct: 105 KTKKIFVGGLPSTVTEDEFKDFFSKYGKVEEHQIIRDHETNRSRGFGFIIFESEEVVDE 163
Score = 39.3 bits (90), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVY 657
D +HF KYGEI + + D TG+ RGF F+ + D S+ + +ED +
Sbjct: 29 DTTYAAFNKHFEKYGEITDSVIMKDRYTGQPRGFGFVTYADP-SVVDSVIEDTH 81
>gi|153792009|ref|NP_001093319.1| heterogeneous nuclear ribonucleoprotein A1 [Bombyx mori]
gi|95102934|gb|ABF51408.1| heterogeneous nuclear ribonucleoprotein A1 [Bombyx mori]
Length = 316
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 91/164 (55%), Gaps = 7/164 (4%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKAS------V 159
G+ ++ T+ LKE + ++GEI +V + DP T RS+GF FI + +++A +
Sbjct: 23 GLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKI 82
Query: 160 EDVIAEGNHVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYD 219
+ I E + ++I+ +A A K+FV GL ++++E+++ +F+ FGNI+ + D
Sbjct: 83 DGRIVEPKRAVPREEIKRPEASATVKKLFVAGLKQDIEEEDLREYFSTFGNIVSVSVVTD 142
Query: 220 KSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
K +++ F F+ F+ V + +I D+ +DVKKA K
Sbjct: 143 KETGKKRGFGFVEFDDYDPVDRVCLQQNHQIKDQHLDVKKAISK 186
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 42/80 (52%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+F+GGL D +K + Q+G I++ + D + K F FIT+ +V + N
Sbjct: 18 KLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNN 77
Query: 246 PKQKINDKEVDVKKATPKPE 265
KI+ + V+ K+A P+ E
Sbjct: 78 RPHKIDGRIVEPKRAVPREE 97
Score = 43.9 bits (102), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 33/47 (70%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVE 654
E+L+E+FS +G I +V++ +D TG+ RGF F+ F D + +++ ++
Sbjct: 122 EDLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDRVCLQ 168
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 27/42 (64%)
Query: 610 LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
LKE + ++GEI +V + DP T RS+GF FI + +++A
Sbjct: 33 LKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEA 74
>gi|195451840|ref|XP_002073098.1| GK13334 [Drosophila willistoni]
gi|194169183|gb|EDW84084.1| GK13334 [Drosophila willistoni]
Length = 402
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 87/166 (52%), Gaps = 7/166 (4%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKAS------V 159
G+ ++ T+E LK HF K+G I +V + DP T RSRGF FI + + ++ A +
Sbjct: 31 GLDYRTTDEGLKAHFEKWGNIVDVVVMKDPKTKRSRGFGFITYSQSYMIDNAQNARPHKI 90
Query: 160 EDVIAEGNHVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYD 219
+ E + ++I+A A A K+FVGGL + +E ++ +F FG I+ + D
Sbjct: 91 DGRTVEPKRAVPRQEIDAPNAGATVKKLFVGGLRDDHDEECLREYFKDFGQIVGVNIVSD 150
Query: 220 KSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE 265
K +++ F FI F+ V ++ I +K +DVKKA K +
Sbjct: 151 KETGKKRGFAFIEFDDYDPVDKIILQKSHTIKNKTLDVKKAIAKQD 196
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 61/103 (59%), Gaps = 5/103 (4%)
Query: 164 AEGNHVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKS 223
+ GN+ N+++I + + K+F+GGL DE +KAHF ++GNI++ + D
Sbjct: 7 SNGNYDDNDEQISEPE---QLRKLFIGGLDYRTTDEGLKAHFEKWGNIVDVVVMKDPKTK 63
Query: 224 QRKNFCFITFEHESVVIDLLKNPK-QKINDKEVDVKKATPKPE 265
+ + F FIT+ +S +ID +N + KI+ + V+ K+A P+ E
Sbjct: 64 RSRGFGFITYS-QSYMIDNAQNARPHKIDGRTVEPKRAVPRQE 105
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
G+ D EE L+E+F +G+I V + SD TG+ RGFAFI F D + ++K
Sbjct: 122 GLRDDHDEECLREYFKDFGQIVGVNIVSDKETGKKRGFAFIEFDDYDPVDK 172
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 27/44 (61%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
E LK HF K+G I +V + DP T RSRGF FI + + ++ A
Sbjct: 39 EGLKAHFEKWGNIVDVVVMKDPKTKRSRGFGFITYSQSYMIDNA 82
>gi|326501296|dbj|BAJ98879.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 354
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 83/160 (51%), Gaps = 18/160 (11%)
Query: 116 LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNKKI 175
++HF YG I + + + T + RGF FI + D +V D + E HVIN K++
Sbjct: 39 FQKHFGNYGVIVDSVIMKNKQTSQPRGFGFITYSD------PAVVDKVMEDTHVINGKQV 92
Query: 176 EAKKAKAK-----------SGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQ 224
E K+ K + KIFVGGL P + +++ K F ++G ++E ++ D +
Sbjct: 93 EIKRTIPKDYMKSNPKDFRTKKIFVGGLPPILTEDDFKDFFEKYGAVVEHQIMRDHQTRR 152
Query: 225 RKNFCFITFEHESVVIDLLKNPKQ-KINDKEVDVKKATPK 263
+ F F+ FE E VV DLL N + +V++KKA PK
Sbjct: 153 SRGFGFVVFESEEVVDDLLANGNMIDLAGSKVEIKKAEPK 192
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GKIFVGGL + + HF +G I+++ + +K SQ + F FIT+ +VV +++
Sbjct: 23 GKIFVGGLPRDTTLATFQKHFGNYGVIVDSVIMKNKQTSQPRGFGFITYSDPAVVDKVME 82
Query: 245 NPKQKINDKEVDVKKATPK 263
+ IN K+V++K+ PK
Sbjct: 83 D-THVINGKQVEIKRTIPK 100
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 41/71 (57%), Gaps = 6/71 (8%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHV-INN 172
++ K+ F KYG + + D T RSRGF F+VF+ E V+D++A GN + +
Sbjct: 127 DDFKDFFEKYGAVVEHQIMRDHQTRRSRGFGFVVFESEE-----VVDDLLANGNMIDLAG 181
Query: 173 KKIEAKKAKAK 183
K+E KKA+ K
Sbjct: 182 SKVEIKKAEPK 192
>gi|395327650|gb|EJF60048.1| RNA-binding domain-containing protein [Dichomitus squalens LYAD-421
SS1]
Length = 333
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 95/167 (56%), Gaps = 5/167 (2%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
E LK++FS++G++E T+ D GRSR FAF+ F+D S+ V + +G +I+ K
Sbjct: 13 EALKKYFSQFGKVEACTIMRD-AAGRSRCFAFLTFEDPASVNAVMVREHFLDGK-IIDPK 70
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
+ ++ ++ K+F+GGL + E ++ +F QFG +++ + D+ + K F F++F
Sbjct: 71 RAIPRQEHQRATKLFIGGLPGSVTSESMREYFTQFGKVVDATVMLDRETGRSKGFGFVSF 130
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKATPKP--EPFGVRGGRGGRGG 278
E+ +V +L +I+ K +DVK A P+ E + GG+ R G
Sbjct: 131 ENVNVE-PMLGFGNLQIDGKLIDVKLAQPRSQREAYAEGGGQTSRSG 176
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 48/79 (60%), Gaps = 8/79 (10%)
Query: 106 PGIVHKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
PG V +E ++E+F+++G++ + T+ D TGRS+GF F+ F E +VE ++
Sbjct: 90 PGSV--TSESMREYFTQFGKVVDATVMLDRETGRSKGFGFVSF------ENVNVEPMLGF 141
Query: 166 GNHVINNKKIEAKKAKAKS 184
GN I+ K I+ K A+ +S
Sbjct: 142 GNLQIDGKLIDVKLAQPRS 160
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 187 IFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNP 246
+F+GGL+ + DE +K +F+QFG + + D + R F F+TFE + V ++
Sbjct: 1 MFIGGLNWDTTDEALKKYFSQFGKVEACTIMRDAAGRSR-CFAFLTFEDPASVNAVMVR- 58
Query: 247 KQKINDKEVDVKKATPKPE 265
+ ++ K +D K+A P+ E
Sbjct: 59 EHFLDGKIIDPKRAIPRQE 77
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYF 658
D E LK++FS++G++E T+ D GRSR FAF+ F+D S+ V + +
Sbjct: 9 DTTDEALKKYFSQFGKVEACTIMRD-AAGRSRCFAFLTFEDPASVNAVMVREHFL 62
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 32/46 (69%), Gaps = 2/46 (4%)
Query: 600 PGIVDKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDT 645
PG V +E ++E+F+++G++ + T+ D TGRS+GF F+ F++
Sbjct: 90 PGSV--TSESMREYFTQFGKVVDATVMLDRETGRSKGFGFVSFENV 133
>gi|149046815|gb|EDL99589.1| heterogeneous nuclear ribonucleoprotein D-like, isoform CRA_d
[Rattus norvegicus]
Length = 127
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/103 (44%), Positives = 69/103 (66%), Gaps = 10/103 (9%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
++L E+ S++GE+ + T+K+DP TGRSRGF F++FKD ASV+ V+ H ++ K
Sbjct: 13 KDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDA-----ASVDKVLELKEHKLDGK 67
Query: 174 KIEAKKAKAKSG-----KIFVGGLSPEMKDEEIKAHFAQFGNI 211
I+ K+AKA G K+FVGGLSP+ +E+IK +F FG +
Sbjct: 68 LIDPKRAKALKGKEPPKKVFVGGLSPDTSEEQIKEYFGAFGEV 110
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 36/48 (75%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
D ++L E+ S++GE+ + T+K+DP TGRSRGF F++FKD S++K
Sbjct: 9 DTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKV 56
Score = 42.4 bits (98), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 18/74 (24%), Positives = 43/74 (58%)
Query: 187 IFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNP 246
+F+GGLS + +++ + ++FG +++ + D + + F F+ F+ + V +L+
Sbjct: 1 MFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLELK 60
Query: 247 KQKINDKEVDVKKA 260
+ K++ K +D K+A
Sbjct: 61 EHKLDGKLIDPKRA 74
>gi|195117176|ref|XP_002003125.1| GI24040 [Drosophila mojavensis]
gi|193913700|gb|EDW12567.1| GI24040 [Drosophila mojavensis]
Length = 423
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 98/195 (50%), Gaps = 25/195 (12%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + T+E L +F ++G+I + + + +GRSRGF F+ F D +V V+
Sbjct: 13 GLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFAD-----PGNVNHVLQS 67
Query: 166 GNHVINNKKIEAKKA------KAKSG---KIFVGGLSPEMKDEEIKAHFAQFGNIIETEM 216
G H ++ + I+ K K K G K+F+GGL + + +++ F ++G + E +
Sbjct: 68 GPHTLDGRTIDPKPCNPRTLQKPKKGGGYKVFLGGLPSNVTETDLRTFFGRYGKVTEVVI 127
Query: 217 PYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGVRGGRGGR 276
YD+ K + + F F++FE E+ V + +N K+V++KKA P R G
Sbjct: 128 MYDQEKKKSRGFGFLSFEEEASVEHVTNERYINLNGKQVEIKKAEP----------RDGS 177
Query: 277 GGRGGRGGRMAGGYG 291
GG+ + G YG
Sbjct: 178 GGQNSNNSAVGGAYG 192
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GK+FVGGLS E E + +F +FG+II+ + + + + F F+TF V +L+
Sbjct: 7 GKLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPGNVNHVLQ 66
Query: 245 NPKQKINDKEVDVKKATPK 263
+ ++ + +D K P+
Sbjct: 67 SGPHTLDGRTIDPKPCNPR 85
Score = 40.4 bits (93), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 40/82 (48%), Gaps = 10/82 (12%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGV 503
++ E + YD+ K + + F F++FE E+ V + +N K+V++KKA P
Sbjct: 121 KVTEVVIMYDQEKKKSRGFGFLSFEEEASVEHVTNERYINLNGKQVEIKKAEP------- 173
Query: 504 RGGRGGRGGRGGRGGRMAGGYG 525
R G GG+ + G YG
Sbjct: 174 ---RDGSGGQNSNNSAVGGAYG 192
>gi|198452965|ref|XP_002137573.1| GA26465 [Drosophila pseudoobscura pseudoobscura]
gi|198132155|gb|EDY68131.1| GA26465 [Drosophila pseudoobscura pseudoobscura]
Length = 401
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 87/166 (52%), Gaps = 7/166 (4%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKAS------V 159
G+ ++ T++ LK HF K+G I +V + DP T RSRGF FI + + ++ A +
Sbjct: 31 GLDYRTTDDGLKAHFEKWGNIVDVVVMKDPKTKRSRGFGFITYSQSYMIDNAQNARPHKI 90
Query: 160 EDVIAEGNHVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYD 219
+ E + ++I+A A A K+FVGGL + +E ++ +F FG I+ + D
Sbjct: 91 DGRTVEPKRAVPRQEIDAPNAGATVKKLFVGGLRDDHDEECLREYFKDFGQIVGVNIVSD 150
Query: 220 KSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE 265
K +++ F FI F+ V ++ I +K +DVKKA K +
Sbjct: 151 KDTGKKRGFAFIEFDDYDPVDKIILQKTHTIKNKSLDVKKAIAKQD 196
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 63/104 (60%), Gaps = 7/104 (6%)
Query: 164 AEGNHVINNKKI-EAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSK 222
+ GN+ N+++I E ++ + K+F+GGL D+ +KAHF ++GNI++ + D
Sbjct: 7 SNGNYDDNDEQITEPEQLR----KLFIGGLDYRTTDDGLKAHFEKWGNIVDVVVMKDPKT 62
Query: 223 SQRKNFCFITFEHESVVIDLLKNPK-QKINDKEVDVKKATPKPE 265
+ + F FIT+ +S +ID +N + KI+ + V+ K+A P+ E
Sbjct: 63 KRSRGFGFITYS-QSYMIDNAQNARPHKIDGRTVEPKRAVPRQE 105
Score = 47.0 bits (110), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFY 659
G+ D EE L+E+F +G+I V + SD +TG+ RGFAFI F D + ++K ++ +
Sbjct: 122 GLRDDHDEECLREYFKDFGQIVGVNIVSDKDTGKKRGFAFIEFDDYDPVDKIILQKTHTI 181
Query: 660 SN 661
N
Sbjct: 182 KN 183
Score = 43.9 bits (102), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 26/42 (61%)
Query: 610 LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
LK HF K+G I +V + DP T RSRGF FI + + ++ A
Sbjct: 41 LKAHFEKWGNIVDVVVMKDPKTKRSRGFGFITYSQSYMIDNA 82
>gi|392563464|gb|EIW56643.1| hypothetical protein TRAVEDRAFT_128184 [Trametes versicolor
FP-101664 SS1]
Length = 216
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 87/154 (56%), Gaps = 12/154 (7%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
E L+++FS++GE+E+ T+ D + GRSRGFAF+ FK E ASV V+ HV++ K
Sbjct: 28 EGLRKYFSEFGEVEDCTILRDQD-GRSRGFAFLTFK-----EPASVNAVMCR-EHVLDGK 80
Query: 174 KIEAKKA-----KAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNF 228
I+ K+A ++ + FVGGLS E ++ F+Q+G +++ + D+ + K F
Sbjct: 81 TIDPKRAIPREEHLRNTRYFVGGLSHSTTSESMRTFFSQYGKVVDCTVMVDRETGRSKGF 140
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKATP 262
F+TFE S L+ P +++K+V P
Sbjct: 141 GFVTFEDASNTEQLVGQPNLFLDEKQVRTAPEMP 174
Score = 47.4 bits (111), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 42/70 (60%), Gaps = 6/70 (8%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ H T E ++ FS+YG++ + T+ D TGRS+GF F+ F+D ++ E ++ +
Sbjct: 103 GLSHSTTSESMRTFFSQYGKVVDCTVMVDRETGRSKGFGFVTFEDA-----SNTEQLVGQ 157
Query: 166 GNHVINNKKI 175
N ++ K++
Sbjct: 158 PNLFLDEKQV 167
Score = 44.3 bits (103), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 32/41 (78%), Gaps = 1/41 (2%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESL 648
E L+++FS++GE+E+ T+ D + GRSRGFAF+ FK+ S+
Sbjct: 28 EGLRKYFSEFGEVEDCTILRDQD-GRSRGFAFLTFKEPASV 67
Score = 43.5 bits (101), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 30/44 (68%)
Query: 607 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
+E ++ FS+YG++ + T+ D TGRS+GF F+ F+D + E+
Sbjct: 110 SESMRTFFSQYGKVVDCTVMVDRETGRSKGFGFVTFEDASNTEQ 153
Score = 42.7 bits (99), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 47/81 (58%), Gaps = 3/81 (3%)
Query: 186 KIFVGGLSPEMKDEE-IKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
K+FVGGLS + D E ++ +F++FG + + + D+ R F F+TF+ E ++ +
Sbjct: 14 KMFVGGLSWDTTDAEGLRKYFSEFGEVEDCTILRDQDGRSR-GFAFLTFK-EPASVNAVM 71
Query: 245 NPKQKINDKEVDVKKATPKPE 265
+ ++ K +D K+A P+ E
Sbjct: 72 CREHVLDGKTIDPKRAIPREE 92
>gi|255563582|ref|XP_002522793.1| Heterogeneous nuclear ribonucleoprotein A1, putative [Ricinus
communis]
gi|223538031|gb|EEF39644.1| Heterogeneous nuclear ribonucleoprotein A1, putative [Ricinus
communis]
Length = 348
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 85/158 (53%), Gaps = 16/158 (10%)
Query: 116 LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNKKI 175
+HF +YGEI + + D TG+ RGF FI + D SV D + E HVI+ K++
Sbjct: 35 FNKHFGRYGEITDSVIMKDRYTGQPRGFGFITYAD------PSVVDKVIEDTHVIHGKQV 88
Query: 176 EAKKA---------KAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRK 226
E K+ K+ KIFVGG+ + ++E K F+++G ++E ++ D ++ +
Sbjct: 89 EIKRTIPKGSGQSKDFKTKKIFVGGIPSSVTEDEFKGFFSKYGQVVEHQIIRDHETNRSR 148
Query: 227 NFCFITFEHESVVIDLLKNPKQ-KINDKEVDVKKATPK 263
F FI F+ E V ++L N + +V++KKA PK
Sbjct: 149 GFGFIIFDSEETVDEMLSNGNMIDMAGTQVEIKKAEPK 186
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Query: 182 AKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVID 241
A GKIF+GGL+ + HF ++G I ++ + D+ Q + F FIT+ SVV
Sbjct: 16 ASPGKIFIGGLAKDTTYATFNKHFGRYGEITDSVIMKDRYTGQPRGFGFITYADPSVVDK 75
Query: 242 LLKNPKQKINDKEVDVKKATPK 263
++++ I+ K+V++K+ PK
Sbjct: 76 VIED-THVIHGKQVEIKRTIPK 96
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 49/87 (56%), Gaps = 7/87 (8%)
Query: 99 KNKMVSHPGIVHKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 157
K K + GI +TE E K FSKYG++ + D T RSRGF FI+F E
Sbjct: 105 KTKKIFVGGIPSSVTEDEFKGFFSKYGQVVEHQIIRDHETNRSRGFGFIIFDSEE----- 159
Query: 158 SVEDVIAEGNHV-INNKKIEAKKAKAK 183
+V+++++ GN + + ++E KKA+ K
Sbjct: 160 TVDEMLSNGNMIDMAGTQVEIKKAEPK 186
Score = 42.7 bits (99), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 593 KNKMVSHPGIVDKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
K K + GI +TE E K FSKYG++ + D T RSRGF FI+F E++++
Sbjct: 105 KTKKIFVGGIPSSVTEDEFKGFFSKYGQVVEHQIIRDHETNRSRGFGFIIFDSEETVDE 163
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVY 657
D +HF +YGEI + + D TG+ RGF FI + D ++K +ED +
Sbjct: 29 DTTYATFNKHFGRYGEITDSVIMKDRYTGQPRGFGFITYADPSVVDKV-IEDTH 81
>gi|350401887|ref|XP_003486296.1| PREDICTED: hypothetical protein LOC100748395 [Bombus impatiens]
Length = 378
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 89/166 (53%), Gaps = 7/166 (4%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFK------DTESLEKASV 159
G+ ++ T++ LK+HF K+GEI +V + DP T RSRGF FI + D ++ V
Sbjct: 23 GLDYRTTDDSLKKHFEKWGEIVDVVVMKDPKTKRSRGFGFITYSRAHMVDDAQNARPHKV 82
Query: 160 EDVIAEGNHVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYD 219
+ + E + ++I +A A K+FVGGL + ++E+++ +F +G+I + D
Sbjct: 83 DGRVVEPKRAVPRQEIGRPEAGATVKKLFVGGLKDDHEEEDLRQYFQSYGSINSISIVTD 142
Query: 220 KSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE 265
K +++ F F+ F+ V + +I K VDVKKA K E
Sbjct: 143 KETGKKRGFGFVEFDDYDPVDKICLQRNHQIRGKHVDVKKALSKAE 188
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 43/80 (53%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+F+GGL D+ +K HF ++G I++ + D + + F FIT+ +V D
Sbjct: 18 KLFIGGLDYRTTDDSLKKHFEKWGEIVDVVVMKDPKTKRSRGFGFITYSRAHMVDDAQNA 77
Query: 246 PKQKINDKEVDVKKATPKPE 265
K++ + V+ K+A P+ E
Sbjct: 78 RPHKVDGRVVEPKRAVPRQE 97
Score = 46.6 bits (109), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 28/45 (62%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKAS 652
+ LK+HF K+GEI +V + DP T RSRGF FI + ++ A
Sbjct: 31 DSLKKHFEKWGEIVDVVVMKDPKTKRSRGFGFITYSRAHMVDDAQ 75
Score = 44.3 bits (103), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 33/51 (64%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVE 654
D E+L+++F YG I ++++ +D TG+ RGF F+ F D + ++K ++
Sbjct: 118 DHEEEDLRQYFQSYGSINSISIVTDKETGKKRGFGFVEFDDYDPVDKICLQ 168
>gi|384254104|gb|EIE27578.1| RNA-binding domain-containing protein [Coccomyxa subellipsoidea
C-169]
Length = 412
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 85/158 (53%), Gaps = 14/158 (8%)
Query: 116 LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNKKI 175
L++HFS++G ++ V + D TG+SRGF F+ F +A A HV++ ++
Sbjct: 64 LEQHFSQFGPLQEVVIMKDRTTGKSRGFGFVTFF------RAMDASCAASQEHVVDGRRC 117
Query: 176 EAKKAKAKSG-------KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNF 228
EAK A + G +IFV + + D + + +F Q+G++ + MP D +K +
Sbjct: 118 EAKYALPRGGGPAPRTTRIFVARIPLSVNDAQFRQYFEQYGSVQDAYMPKDATKQSHRGI 177
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEP 266
F+TF + V ++ +P +N +E+ + +ATPK +P
Sbjct: 178 GFVTFANADSVEAVMSSP-HSMNGQELAIDRATPKDKP 214
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDK-SKSQRKNFCFITFEHESVVIDLLK 244
+IFVG L+ E + ++K +F +FG +++ +P DK ++S+ + F F+TFE + V+ +
Sbjct: 288 RIFVGKLNKETTENDVKEYFTRFGYVMDVYLPRDKVNRSEHRGFGFVTFETDGAVLRIHA 347
Query: 245 NPKQKINDKEVDVKKATPKPE 265
+ + +I V + A P+ E
Sbjct: 348 HGQHQIKGSVVAIDSAVPRRE 368
Score = 42.4 bits (98), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 25/39 (64%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVF 642
D L++HFS++G ++ V + D TG+SRGF F+ F
Sbjct: 58 DTTEASLEQHFSQFGPLQEVVIMKDRTTGKSRGFGFVTF 96
>gi|195156455|ref|XP_002019115.1| GL26194 [Drosophila persimilis]
gi|194115268|gb|EDW37311.1| GL26194 [Drosophila persimilis]
Length = 223
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 93/187 (49%), Gaps = 24/187 (12%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
E L +F ++G+I + + + +GRSRGF F+ F D +V V+ G H ++ +
Sbjct: 21 ENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADP-----TNVNHVLQNGPHTLDGR 75
Query: 174 KIEAKKA------KAKSG---KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQ 224
I+ K K K G K+F+GGL + + +++ F ++G + E + YD+ K +
Sbjct: 76 TIDPKPCNPRTLQKPKKGGGYKVFLGGLPSNVTETDLRTFFGRYGKVTEVVIMYDQEKKK 135
Query: 225 RKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGVRGGRGGRGGRGGRGG 284
+ F F++FE ES V + +N K+V++KKA P R G GG+
Sbjct: 136 SRGFGFLSFEEESSVEHVTNERYINLNGKQVEIKKAEP----------RDGSGGQNSNNS 185
Query: 285 RMAGGYG 291
+ G YG
Sbjct: 186 TVGGAYG 192
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 44/79 (55%)
Query: 185 GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLK 244
GK+FVGGLS E E + +F +FG+II+ + + + + F F+TF + V +L+
Sbjct: 7 GKLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVLQ 66
Query: 245 NPKQKINDKEVDVKKATPK 263
N ++ + +D K P+
Sbjct: 67 NGPHTLDGRTIDPKPCNPR 85
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 10/82 (12%)
Query: 444 EIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGV 503
++ E + YD+ K + + F F++FE ES V + +N K+V++KKA P
Sbjct: 121 KVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNERYINLNGKQVEIKKAEP------- 173
Query: 504 RGGRGGRGGRGGRGGRMAGGYG 525
R G GG+ + G YG
Sbjct: 174 ---RDGSGGQNSNNSTVGGAYG 192
>gi|402220502|gb|EJU00573.1| hypothetical protein DACRYDRAFT_53825 [Dacryopinax sp. DJM-731 SS1]
Length = 382
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 88/155 (56%), Gaps = 12/155 (7%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
E L+ +F ++GE++ T+ D GRSRGFAF+ F+ E A+V V+ +H ++ K
Sbjct: 13 ESLRRYFEQFGEVDACTIMRDAG-GRSRGFAFLTFR-----EPAAVNAVMVREHH-LDGK 65
Query: 174 KIEAKKA-----KAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNF 228
I+ K+A K+ K+F+GGL+P + E ++ F+QFG +I++ + D+ + K F
Sbjct: 66 IIDPKRAIPRLEHQKTQKLFIGGLAPSVTSESMRDFFSQFGAVIDSTVMVDRESGRSKGF 125
Query: 229 CFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
F+TFE L+ I+ K ++VK A P+
Sbjct: 126 GFVTFEDGQGAEKLVGQGILSIDGKPIEVKIAQPR 160
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 46/78 (58%), Gaps = 6/78 (7%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ +T E +++ FS++G + + T+ D +GRS+GF F+ F+D + EK ++ +
Sbjct: 88 GLAPSVTSESMRDFFSQFGAVIDSTVMVDRESGRSKGFGFVTFEDGQGAEK-----LVGQ 142
Query: 166 GNHVINNKKIEAKKAKAK 183
G I+ K IE K A+ +
Sbjct: 143 GILSIDGKPIEVKIAQPR 160
Score = 43.5 bits (101), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 42/79 (53%), Gaps = 2/79 (2%)
Query: 187 IFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNP 246
+FVGGL+ + DE ++ +F QFG + + D R F F+TF E ++ +
Sbjct: 1 MFVGGLNWDTTDESLRRYFEQFGEVDACTIMRDAGGRSR-GFAFLTF-REPAAVNAVMVR 58
Query: 247 KQKINDKEVDVKKATPKPE 265
+ ++ K +D K+A P+ E
Sbjct: 59 EHHLDGKIIDPKRAIPRLE 77
Score = 42.7 bits (99), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
G+ +T E +++ FS++G + + T+ D +GRS+GF F+ F+D + EK
Sbjct: 88 GLAPSVTSESMRDFFSQFGAVIDSTVMVDRESGRSKGFGFVTFEDGQGAEK 138
Score = 42.4 bits (98), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVED 655
D E L+ +F ++GE++ T+ D GRSRGFAF+ F++ ++ V +
Sbjct: 9 DTTDESLRRYFEQFGEVDACTIMRDAG-GRSRGFAFLTFREPAAVNAVMVRE 59
>gi|358349448|ref|XP_003638749.1| RNA-binding protein [Medicago truncatula]
gi|355504684|gb|AES85887.1| RNA-binding protein [Medicago truncatula]
Length = 371
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 89/169 (52%), Gaps = 20/169 (11%)
Query: 110 HKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDV--IAEGN 167
H T+ LKE+ SK+GE+E+ + + +TGRSRGF ++ F ASV+D +
Sbjct: 14 HVDTDGLKEYMSKFGELEDCIVMKERSTGRSRGFGYVTF--------ASVDDAKNVLSSE 65
Query: 168 HVINNKKIEAKKAKAKS---------GKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPY 218
H + ++ +E K A K +IFV ++P + +E ++HF ++G+I + MP
Sbjct: 66 HSLGDRTLEVKVATPKEEMRAPVKKVTRIFVARIAPSVTEETFRSHFEKYGDITDLYMPK 125
Query: 219 DKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPF 267
D+ + FITF V +L+K ++ +V V +ATPK + F
Sbjct: 126 DRGSKTHRGIGFITFATADSVENLMKE-THELGGSDVVVDRATPKEDDF 173
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 91/241 (37%), Gaps = 64/241 (26%)
Query: 108 IVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEG 166
I +TEE + HF KYG+I ++ + D + RG FI F +S+E E G
Sbjct: 99 IAPSVTEETFRSHFEKYGDITDLYMPKDRGSKTHRGIGFITFATADSVENLMKETHELGG 158
Query: 167 NHVINNKKI-------------------------------------------------EA 177
+ V+ ++
Sbjct: 159 SDVVVDRATPKEDDFKPIGRTRTPQLGYSAYSTYIPASTRYAALGAPTMYDRPSSIYGRG 218
Query: 178 KKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHES 237
+ A+ S KIFVG L PE E+++ +F +FG+I++ +P D + + F F+TF +S
Sbjct: 219 EPARGISKKIFVGRLPPEATTEDLRLYFGRFGHILDVYIPRDVKRPGHRGFGFVTFA-DS 277
Query: 238 VVIDLLKNPKQKINDKEVDVKKATPKPEPFGVRGGRGGRGGRGGRGGRMAGGYGGYGGYG 297
V D + +I +EV + A P E G G M + GYG
Sbjct: 278 GVADRVSRRPHEICGQEVAIDSAAPLDEA-------------GPSGNTMLNSMDSFRGYG 324
Query: 298 G 298
G
Sbjct: 325 G 325
Score = 42.4 bits (98), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 32/50 (64%), Gaps = 8/50 (16%)
Query: 607 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDV 656
T+ LKE+ SK+GE+E+ + + +TGRSRGF ++ F ASV+D
Sbjct: 17 TDGLKEYMSKFGELEDCIVMKERSTGRSRGFGYVTF--------ASVDDA 58
>gi|340718466|ref|XP_003397688.1| PREDICTED: hypothetical protein LOC100643287 [Bombus terrestris]
Length = 379
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 89/166 (53%), Gaps = 7/166 (4%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFK------DTESLEKASV 159
G+ ++ T++ LK+HF K+GEI +V + DP T RSRGF FI + D ++ V
Sbjct: 23 GLDYRTTDDSLKKHFEKWGEIVDVVVMKDPKTKRSRGFGFITYSRAHMVDDAQNARPHKV 82
Query: 160 EDVIAEGNHVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYD 219
+ + E + ++I +A A K+FVGGL + ++E+++ +F +G+I + D
Sbjct: 83 DGRVVEPKRAVPRQEIGRPEAGATVKKLFVGGLKDDHEEEDLRQYFQSYGSINSISIVTD 142
Query: 220 KSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE 265
K +++ F F+ F+ V + +I K VDVKKA K E
Sbjct: 143 KETGKKRGFGFVEFDDYDPVDKICLQRNHQIRGKHVDVKKALSKAE 188
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 43/80 (53%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+F+GGL D+ +K HF ++G I++ + D + + F FIT+ +V D
Sbjct: 18 KLFIGGLDYRTTDDSLKKHFEKWGEIVDVVVMKDPKTKRSRGFGFITYSRAHMVDDAQNA 77
Query: 246 PKQKINDKEVDVKKATPKPE 265
K++ + V+ K+A P+ E
Sbjct: 78 RPHKVDGRVVEPKRAVPRQE 97
Score = 46.6 bits (109), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 28/45 (62%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKAS 652
+ LK+HF K+GEI +V + DP T RSRGF FI + ++ A
Sbjct: 31 DSLKKHFEKWGEIVDVVVMKDPKTKRSRGFGFITYSRAHMVDDAQ 75
Score = 44.3 bits (103), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 33/51 (64%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVE 654
D E+L+++F YG I ++++ +D TG+ RGF F+ F D + ++K ++
Sbjct: 118 DHEEEDLRQYFQSYGSINSISIVTDKETGKKRGFGFVEFDDYDPVDKICLQ 168
>gi|214241|gb|AAA49742.1| ribonucleoprotein A1b [Xenopus laevis]
Length = 351
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 90/178 (50%), Gaps = 12/178 (6%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
E L+EHF ++G + + + DPN+ RSRGF F+ + T+ ++ A V+ K
Sbjct: 28 ESLREHFEQWGTLTDCVVMRDPNSKRSRGFGFVTYLSTDEVDAAMTARPHKVDGRVVEPK 87
Query: 174 KIEAKKAKAKSG------KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKN 227
+ +++ ++ G KIFVGG+ + +++ ++ +F Q+G I E+ D+ +++
Sbjct: 88 RAVSREDSSRPGAHLTVKKIFVGGIKEDTEEDHLREYFEQYGKIEVIEIMTDRGSGKKRG 147
Query: 228 FCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGV------RGGRGGRGGR 279
F F+TFE V ++ +N+ V+KA K E V RGG G G R
Sbjct: 148 FAFVTFEDHDSVDKIVIQKYHTVNNHNSQVRKALSKQEMASVSGSQRERGGSGNYGSR 205
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 43/63 (68%), Gaps = 2/63 (3%)
Query: 601 GIVDKITEE--LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYF 658
G + + TEE L+E+F +YG+IE + + +D +G+ RGFAF+ F+D +S++K ++ +
Sbjct: 110 GGIKEDTEEDHLREYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFEDHDSVDKIVIQKYHT 169
Query: 659 YSN 661
+N
Sbjct: 170 VNN 172
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 47/92 (51%)
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
K EA + K+F+GGLS E DE ++ HF Q+G + + + D + + + F F+T+
Sbjct: 3 KSEAPNEPEQLRKLFIGGLSFETTDESLREHFEQWGTLTDCVVMRDPNSKRSRGFGFVTY 62
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKATPKPE 265
V + K++ + V+ K+A + +
Sbjct: 63 LSTDEVDAAMTARPHKVDGRVVEPKRAVSRED 94
Score = 45.4 bits (106), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 29/44 (65%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
E L+EHF ++G + + + DPN+ RSRGF F+ + T+ ++ A
Sbjct: 28 ESLREHFEQWGTLTDCVVMRDPNSKRSRGFGFVTYLSTDEVDAA 71
Score = 40.4 bits (93), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Query: 443 MEIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFG 502
+E+IE + D+ +++ F F+TFE V ++ +N+ V+KA K E
Sbjct: 131 IEVIE--IMTDRGSGKKRGFAFVTFEDHDSVDKIVIQKYHTVNNHNSQVRKALSKQEMAS 188
Query: 503 VRGGRGGRGGRGGRGGR 519
V G + RGG G G R
Sbjct: 189 VSGSQRERGGSGNYGSR 205
>gi|354480942|ref|XP_003502662.1| PREDICTED: DAZ-associated protein 1-like [Cricetulus griseus]
Length = 495
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 83/173 (47%), Gaps = 28/173 (16%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
E L+ +FS+YGE+ + + D T +SRGF F+ FKD V V+A H ++ +
Sbjct: 113 ETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNC-----VGTVLASRPHTLDGR 167
Query: 174 KIEAKKA-----------------------KAKSGKIFVGGLSPEMKDEEIKAHFAQFGN 210
I+ K +KS KIFVGG+ + E++ +F +FG
Sbjct: 168 NIDPKPCTPRGMQPERTRPKEGWQKGPRSDSSKSNKIFVGGIPHNCGETELREYFKKFGV 227
Query: 211 IIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ E M YD K + + F FITFE E V + I K+V+VK+A P+
Sbjct: 228 VTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPR 280
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 46/78 (58%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+FVGGL E ++++F+Q+G +++ + DK+ +Q + F F+ F+ + V +L +
Sbjct: 100 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 159
Query: 246 PKQKINDKEVDVKKATPK 263
++ + +D K TP+
Sbjct: 160 RPHTLDGRNIDPKPCTPR 177
Score = 43.1 bits (100), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 28/43 (65%)
Query: 609 ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
EL+E+F K+G + V + D R RGF FI F+D +S+++A
Sbjct: 217 ELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQA 259
Score = 42.4 bits (98), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 26/41 (63%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESL 648
E L+ +FS+YGE+ + + D T +SRGF F+ FKD +
Sbjct: 113 ETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCV 153
>gi|403308185|ref|XP_003944552.1| PREDICTED: DAZ-associated protein 1 [Saimiri boliviensis
boliviensis]
Length = 489
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 92/193 (47%), Gaps = 31/193 (16%)
Query: 95 IMEAKNKMVSHPGIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTES 153
+ EA+ V G+ T+E L+ +FS+YGE+ + + D T +SRGF F+ FKD
Sbjct: 89 MAEARKLFVG--GLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNC 146
Query: 154 LEKASVEDVIAEGNHVINNKKIEAKKA-----------------------KAKSGKIFVG 190
V V+A H ++ + I+ K +KS KIFVG
Sbjct: 147 -----VGTVLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDNSKSNKIFVG 201
Query: 191 GLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKI 250
G+ + E++ +F +FG + E M YD K + + F FITFE E V + I
Sbjct: 202 GIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDI 261
Query: 251 NDKEVDVKKATPK 263
K+V+VK+A P+
Sbjct: 262 MGKKVEVKRAEPR 274
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/114 (23%), Positives = 60/114 (52%), Gaps = 1/114 (0%)
Query: 150 DTESLEKASVEDVIAEGNHVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFG 209
D + V V+++ V+ ++ A++ K+FVGGL E ++++F+Q+G
Sbjct: 59 DHQGRVDPCVPAVVSDAGSVLGSQTYPVD-VMAEARKLFVGGLDWSTTQETLRSYFSQYG 117
Query: 210 NIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+++ + DK+ +Q + F F+ F+ + V +L + ++ + +D K TP+
Sbjct: 118 EVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPR 171
Score = 43.1 bits (100), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 28/43 (65%)
Query: 609 ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
EL+E+F K+G + V + D R RGF FI F+D +S+++A
Sbjct: 211 ELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQA 253
Score = 42.7 bits (99), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 26/41 (63%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESL 648
E L+ +FS+YGE+ + + D T +SRGF F+ FKD +
Sbjct: 107 ETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCV 147
>gi|133258|sp|P17130.1|ROA1_XENLA RecName: Full=Heterogeneous nuclear ribonucleoproteins A1 homolog;
Short=hnRNP A1; AltName: Full=Helix-destabilizing
protein; AltName: Full=Single-strand-binding protein;
AltName: Full=hnRNP core protein A1
gi|214239|gb|AAA49741.1| ribonucleoprotein A1a [Xenopus laevis]
Length = 365
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 90/178 (50%), Gaps = 12/178 (6%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
E L+EHF ++G + + + DPN+ RSRGF F+ + T+ ++ A V+ K
Sbjct: 28 ESLREHFEQWGTLTDCVVMRDPNSKRSRGFGFVTYLSTDEVDAAMTARPHKVDGRVVEPK 87
Query: 174 KIEAKKAKAKSG------KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKN 227
+ +++ ++ G KIFVGG+ + +++ ++ +F Q+G I E+ D+ +++
Sbjct: 88 RAVSREDSSRPGAHLTVKKIFVGGIKEDTEEDHLREYFEQYGKIEVIEIMTDRGSGKKRG 147
Query: 228 FCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGV------RGGRGGRGGR 279
F F+TFE V ++ +N+ V+KA K E V RGG G G R
Sbjct: 148 FAFVTFEDHDSVDKIVIQKYHTVNNHNSQVRKALSKQEMASVSGSQRERGGSGNYGSR 205
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 43/63 (68%), Gaps = 2/63 (3%)
Query: 601 GIVDKITEE--LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYF 658
G + + TEE L+E+F +YG+IE + + +D +G+ RGFAF+ F+D +S++K ++ +
Sbjct: 110 GGIKEDTEEDHLREYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFEDHDSVDKIVIQKYHT 169
Query: 659 YSN 661
+N
Sbjct: 170 VNN 172
Score = 47.8 bits (112), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 47/92 (51%)
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
K EA + K+F+GGLS E DE ++ HF Q+G + + + D + + + F F+T+
Sbjct: 3 KSEAPNEPEQLRKLFIGGLSFETTDESLREHFEQWGTLTDCVVMRDPNSKRSRGFGFVTY 62
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKATPKPE 265
V + K++ + V+ K+A + +
Sbjct: 63 LSTDEVDAAMTARPHKVDGRVVEPKRAVSRED 94
Score = 45.4 bits (106), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 29/44 (65%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
E L+EHF ++G + + + DPN+ RSRGF F+ + T+ ++ A
Sbjct: 28 ESLREHFEQWGTLTDCVVMRDPNSKRSRGFGFVTYLSTDEVDAA 71
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Query: 443 MEIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFG 502
+E+IE + D+ +++ F F+TFE V ++ +N+ V+KA K E
Sbjct: 131 IEVIE--IMTDRGSGKKRGFAFVTFEDHDSVDKIVIQKYHTVNNHNSQVRKALSKQEMAS 188
Query: 503 VRGGRGGRGGRGGRGGR 519
V G + RGG G G R
Sbjct: 189 VSGSQRERGGSGNYGSR 205
>gi|195329210|ref|XP_002031304.1| GM25918 [Drosophila sechellia]
gi|194120247|gb|EDW42290.1| GM25918 [Drosophila sechellia]
Length = 385
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 87/166 (52%), Gaps = 7/166 (4%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKAS------V 159
G+ ++ T+E LK HF K+G I +V + DP T RSRGF FI + + ++ A +
Sbjct: 30 GLDYRTTDEGLKAHFEKWGNIVDVVVMKDPKTKRSRGFGFITYSQSYMIDNAQNARPHKI 89
Query: 160 EDVIAEGNHVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYD 219
+ E + ++I++ A A K+FVGGL + +E ++ +F FG I+ + D
Sbjct: 90 DGRTVEPKRAVPRQEIDSPNAGATVKKLFVGGLRDDHDEECLREYFKDFGQIVSVNIVSD 149
Query: 220 KSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE 265
K +++ F FI F+ V ++ I +K +DVKKA K +
Sbjct: 150 KDTGKKRGFAFIEFDDYDPVDKIILQKTHSIKNKTLDVKKAIAKQD 195
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 50/81 (61%), Gaps = 2/81 (2%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+F+GGL DE +KAHF ++GNI++ + D + + F FIT+ +S +ID +N
Sbjct: 25 KLFIGGLDYRTTDEGLKAHFEKWGNIVDVVVMKDPKTKRSRGFGFITYS-QSYMIDNAQN 83
Query: 246 PK-QKINDKEVDVKKATPKPE 265
+ KI+ + V+ K+A P+ E
Sbjct: 84 ARPHKIDGRTVEPKRAVPRQE 104
Score = 47.0 bits (110), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFY 659
G+ D EE L+E+F +G+I +V + SD +TG+ RGFAFI F D + ++K ++ +
Sbjct: 121 GLRDDHDEECLREYFKDFGQIVSVNIVSDKDTGKKRGFAFIEFDDYDPVDKIILQKTHSI 180
Query: 660 SN 661
N
Sbjct: 181 KN 182
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 27/45 (60%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKAS 652
E LK HF K+G I +V + DP T RSRGF FI + + ++ A
Sbjct: 38 EGLKAHFEKWGNIVDVVVMKDPKTKRSRGFGFITYSQSYMIDNAQ 82
>gi|357619642|gb|EHJ72132.1| heterogeneous nuclear ribonucleoprotein A1 [Danaus plexippus]
Length = 307
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 84/154 (54%), Gaps = 6/154 (3%)
Query: 116 LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKAS------VEDVIAEGNHV 169
LKE + ++G+I +V + DP T RSRGF FI + ++ A ++ I E
Sbjct: 40 LKEFYEQWGDIVDVVVMKDPQTKRSRGFGFITYSRAHMVDDAQKNRPHKIDGRIVEPKRA 99
Query: 170 INNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFC 229
+ ++I+ A A K+F+GG+ ++++E+++ +F++FG II + +K +++ F
Sbjct: 100 VPREEIKRPDASATVKKLFIGGIKQDIEEEDLREYFSKFGEIISVSLVTEKDTGKKRGFG 159
Query: 230 FITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
FI F+ V + P K+ + +DVKKA K
Sbjct: 160 FIEFDDYDPVDRICLQPSHKVKGRRLDVKKAISK 193
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 52/79 (65%), Gaps = 6/79 (7%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
GI I EE L+E+FSK+GEI +V+L ++ +TG+ RGF FI F D + +++ + +
Sbjct: 121 GIKQDIEEEDLREYFSKFGEIISVSLVTEKDTGKKRGFGFIEFDDYDPVDR-----ICLQ 175
Query: 166 GNHVINNKKIEAKKAKAKS 184
+H + ++++ KKA +K+
Sbjct: 176 PSHKVKGRRLDVKKAISKT 194
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 44/80 (55%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+F+GGL D +K + Q+G+I++ + D + + F FIT+ +V D KN
Sbjct: 25 KLFIGGLDYCTTDTSLKEFYEQWGDIVDVVVMKDPQTKRSRGFGFITYSRAHMVDDAQKN 84
Query: 246 PKQKINDKEVDVKKATPKPE 265
KI+ + V+ K+A P+ E
Sbjct: 85 RPHKIDGRIVEPKRAVPREE 104
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVE 654
GI I EE L+E+FSK+GEI +V+L ++ +TG+ RGF FI F D + +++ ++
Sbjct: 121 GIKQDIEEEDLREYFSKFGEIISVSLVTEKDTGKKRGFGFIEFDDYDPVDRICLQ 175
Score = 40.4 bits (93), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 26/42 (61%)
Query: 610 LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
LKE + ++G+I +V + DP T RSRGF FI + ++ A
Sbjct: 40 LKEFYEQWGDIVDVVVMKDPQTKRSRGFGFITYSRAHMVDDA 81
>gi|410949991|ref|XP_003981699.1| PREDICTED: LOW QUALITY PROTEIN: DAZ-associated protein 1 [Felis
catus]
Length = 472
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 83/173 (47%), Gaps = 28/173 (16%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
E L+ +FS+YGE+ + + D T +SRGF F+ FKD V V+A H ++ +
Sbjct: 90 ETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNC-----VGTVLASRPHTLDGR 144
Query: 174 KIEAKKA-----------------------KAKSGKIFVGGLSPEMKDEEIKAHFAQFGN 210
I+ K +KS KIFVGG+ + E++ +F +FG
Sbjct: 145 NIDPKPCTPRGMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETELREYFKKFGV 204
Query: 211 IIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ E M YD K + + F FITFE E V + I K+V+VK+A P+
Sbjct: 205 VTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPR 257
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/125 (22%), Positives = 61/125 (48%), Gaps = 5/125 (4%)
Query: 139 RSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNKKIEAKKAKAKSGKIFVGGLSPEMKD 198
R RG+ F++ L + +D+ + + + K+FVGGL
Sbjct: 35 RLRGWGFVL-----GLWRGPTQDLPEPVGTFCLRTRESMPSEQEERKKLFVGGLDWSTTQ 89
Query: 199 EEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVK 258
E ++++F+Q+G +++ + DK+ +Q + F F+ F+ + V +L + ++ + +D K
Sbjct: 90 ETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPK 149
Query: 259 KATPK 263
TP+
Sbjct: 150 PCTPR 154
Score = 43.1 bits (100), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 28/43 (65%)
Query: 609 ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
EL+E+F K+G + V + D R RGF FI F+D +S+++A
Sbjct: 194 ELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQA 236
Score = 42.4 bits (98), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 26/41 (63%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESL 648
E L+ +FS+YGE+ + + D T +SRGF F+ FKD +
Sbjct: 90 ETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCV 130
>gi|383855454|ref|XP_003703227.1| PREDICTED: uncharacterized protein LOC100883215 [Megachile
rotundata]
Length = 378
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 89/166 (53%), Gaps = 7/166 (4%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFK------DTESLEKASV 159
G+ ++ T++ LK+HF K+GEI +V + DP T RSRGF FI + D ++ V
Sbjct: 23 GLDYRTTDDSLKKHFEKWGEIVDVVVMKDPKTKRSRGFGFITYSRAHMVDDAQNARPHKV 82
Query: 160 EDVIAEGNHVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYD 219
+ + E + ++I +A A K+FVGGL + ++E+++ +F +G+I + D
Sbjct: 83 DGRVVEPKRAVPRQEIGRPEAGATVKKLFVGGLKDDHEEEDLRQYFQSYGSINSISIVTD 142
Query: 220 KSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE 265
K +++ F F+ F+ V + +I K VDVKKA + E
Sbjct: 143 KETGKKRGFGFVEFDDYDPVDKICLQRNHQIRGKHVDVKKALSRAE 188
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 43/80 (53%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+F+GGL D+ +K HF ++G I++ + D + + F FIT+ +V D
Sbjct: 18 KLFIGGLDYRTTDDSLKKHFEKWGEIVDVVVMKDPKTKRSRGFGFITYSRAHMVDDAQNA 77
Query: 246 PKQKINDKEVDVKKATPKPE 265
K++ + V+ K+A P+ E
Sbjct: 78 RPHKVDGRVVEPKRAVPRQE 97
Score = 46.6 bits (109), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 28/45 (62%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKAS 652
+ LK+HF K+GEI +V + DP T RSRGF FI + ++ A
Sbjct: 31 DSLKKHFEKWGEIVDVVVMKDPKTKRSRGFGFITYSRAHMVDDAQ 75
Score = 44.3 bits (103), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 33/51 (64%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVE 654
D E+L+++F YG I ++++ +D TG+ RGF F+ F D + ++K ++
Sbjct: 118 DHEEEDLRQYFQSYGSINSISIVTDKETGKKRGFGFVEFDDYDPVDKICLQ 168
>gi|296081021|emb|CBI18525.3| unnamed protein product [Vitis vinifera]
Length = 242
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 84/158 (53%), Gaps = 16/158 (10%)
Query: 116 LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNKKI 175
+HF KYGEI + + D TG+ RGF F+ + D SV D + E HVIN K++
Sbjct: 35 FNKHFEKYGEITDSVIMKDRYTGQPRGFGFVTYAD------PSVVDSVIEDTHVINGKQV 88
Query: 176 EAKKA---------KAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRK 226
E K+ K+ KIFVGGL + ++E K F+++G + E ++ D ++ +
Sbjct: 89 EIKRTIPKGSGQSKDFKTKKIFVGGLPSTVTEDEFKDFFSKYGKVEEHQIIRDHETNRSR 148
Query: 227 NFCFITFEHESVVIDLLKNPKQ-KINDKEVDVKKATPK 263
F FI FE E VV ++L + +V++KKA PK
Sbjct: 149 GFGFIIFESEEVVDEILSEGNMIDMAGTQVEIKKAEPK 186
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Query: 182 AKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVID 241
A GKIF+GGL+ + HF ++G I ++ + D+ Q + F F+T+ SVV
Sbjct: 16 ASPGKIFIGGLAKDTTYAAFNKHFEKYGEITDSVIMKDRYTGQPRGFGFVTYADPSVVDS 75
Query: 242 LLKNPKQKINDKEVDVKKATPK 263
++++ IN K+V++K+ PK
Sbjct: 76 VIED-THVINGKQVEIKRTIPK 96
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 52/87 (59%), Gaps = 7/87 (8%)
Query: 99 KNKMVSHPGIVHKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 157
K K + G+ +TE E K+ FSKYG++E + D T RSRGF FI+F+ E
Sbjct: 105 KTKKIFVGGLPSTVTEDEFKDFFSKYGKVEEHQIIRDHETNRSRGFGFIIFESEE----- 159
Query: 158 SVEDVIAEGNHV-INNKKIEAKKAKAK 183
V+++++EGN + + ++E KKA+ K
Sbjct: 160 VVDEILSEGNMIDMAGTQVEIKKAEPK 186
Score = 44.7 bits (104), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 593 KNKMVSHPGIVDKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
K K + G+ +TE E K+ FSKYG++E + D T RSRGF FI+F+ E +++
Sbjct: 105 KTKKIFVGGLPSTVTEDEFKDFFSKYGKVEEHQIIRDHETNRSRGFGFIIFESEEVVDE 163
Score = 38.9 bits (89), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVY 657
D +HF KYGEI + + D TG+ RGF F+ + D S+ + +ED +
Sbjct: 29 DTTYAAFNKHFEKYGEITDSVIMKDRYTGQPRGFGFVTYADP-SVVDSVIEDTH 81
>gi|413954078|gb|AFW86727.1| hypothetical protein ZEAMMB73_661369 [Zea mays]
Length = 278
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 77/143 (53%), Gaps = 16/143 (11%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + TEE +HF KYG I + + D +T RGF F+ F D SV D + E
Sbjct: 99 GVAWETTEETFTKHFQKYGAITDSVIMKDKHTRMPRGFGFVTFSD------PSVLDRVLE 152
Query: 166 GNHVINNKKIEAK---------KAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEM 216
HVI+ + +E K K K+ KIFVGG+ P + ++++K HF+ +G ++E ++
Sbjct: 153 DEHVIDGRTVEVKRTVPKELSSKDGPKTKKIFVGGIPPSLTEDKLKEHFSSYGKVVEHQI 212
Query: 217 PYDKSKSQRKNFCFITFEHESVV 239
D S + + F F+TFE E V
Sbjct: 213 MLDHSTGRSRGFGFVTFESEDAV 235
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Query: 184 SGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLL 243
SGK+FVGG++ E +E HF ++G I ++ + DK + F F+TF SV+ +L
Sbjct: 92 SGKVFVGGVAWETTEETFTKHFQKYGAITDSVIMKDKHTRMPRGFGFVTFSDPSVLDRVL 151
Query: 244 KNPKQKINDKEVDVKKATPK 263
++ + I+ + V+VK+ PK
Sbjct: 152 ED-EHVIDGRTVEVKRTVPK 170
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 48/79 (60%), Gaps = 7/79 (8%)
Query: 99 KNKMVSHPGIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 157
K K + GI +TE+ LKEHFS YG++ + D +TGRSRGF F+ F+ +++E+
Sbjct: 179 KTKKIFVGGIPPSLTEDKLKEHFSSYGKVVEHQIMLDHSTGRSRGFGFVTFESEDAVER- 237
Query: 158 SVEDVIAEGN-HVINNKKI 175
V++EG H + K++
Sbjct: 238 ----VMSEGRMHDLGGKQV 252
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 593 KNKMVSHPGIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
K K + GI +TE+ LKEHFS YG++ + D +TGRSRGF F+ F+ +++E+
Sbjct: 179 KTKKIFVGGIPPSLTEDKLKEHFSSYGKVVEHQIMLDHSTGRSRGFGFVTFESEDAVERV 238
Query: 652 SVE 654
E
Sbjct: 239 MSE 241
>gi|397466676|ref|XP_003805076.1| PREDICTED: LOW QUALITY PROTEIN: DAZ-associated protein 1 [Pan
paniscus]
Length = 460
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 83/173 (47%), Gaps = 28/173 (16%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
E L+ +FS+YGE+ + + D T +SRGF F+ FKD V V+A H ++ +
Sbjct: 77 ETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNC-----VGTVLASRPHTLDGR 131
Query: 174 KIEAKKA-----------------------KAKSGKIFVGGLSPEMKDEEIKAHFAQFGN 210
I+ K +KS KIFVGG+ + E++ +F +FG
Sbjct: 132 NIDPKPCTPRGMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETELREYFKKFGV 191
Query: 211 IIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPK 263
+ E M YD K + + F FITFE E V + I K+V+VK+A P+
Sbjct: 192 VTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPR 244
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 46/78 (58%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+FVGGL E ++++F+Q+G +++ + DK+ +Q + F F+ F+ + V +L +
Sbjct: 64 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 123
Query: 246 PKQKINDKEVDVKKATPK 263
++ + +D K TP+
Sbjct: 124 RPHTLDGRNIDPKPCTPR 141
Score = 43.1 bits (100), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 28/43 (65%)
Query: 609 ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
EL+E+F K+G + V + D R RGF FI F+D +S+++A
Sbjct: 181 ELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQA 223
Score = 42.4 bits (98), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 26/41 (63%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESL 648
E L+ +FS+YGE+ + + D T +SRGF F+ FKD +
Sbjct: 77 ETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCV 117
>gi|224055563|ref|XP_002298541.1| predicted protein [Populus trichocarpa]
gi|222845799|gb|EEE83346.1| predicted protein [Populus trichocarpa]
Length = 171
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/140 (35%), Positives = 75/140 (53%), Gaps = 15/140 (10%)
Query: 113 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINN 172
T + +HF KYGEI + + D TG+ RGF F+ + D SV D + + H+IN
Sbjct: 21 TAQFIKHFGKYGEITDSVIMKDRKTGQPRGFGFVTYAD------PSVVDQVIQDTHIING 74
Query: 173 KKIEAKKAKAK---------SGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKS 223
K++E K+ K + KIFVGG+ + ++E F QFG + E ++ D S +
Sbjct: 75 KQVEIKRTIPKGVVGSKDFRTRKIFVGGIPAVVTEDEFNEFFTQFGEVTEHQIMRDHSTN 134
Query: 224 QRKNFCFITFEHESVVIDLL 243
+ + F FITF+ E V DLL
Sbjct: 135 RSRGFGFITFDTEQAVDDLL 154
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 182 AKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVID 241
A GKIF+GGL+ E + HF ++G I ++ + D+ Q + F F+T+ SVV
Sbjct: 5 ASPGKIFIGGLARETTTAQFIKHFGKYGEITDSVIMKDRKTGQPRGFGFVTYADPSVVDQ 64
Query: 242 LLKNPKQKINDKEVDVKKATPK 263
++++ IN K+V++K+ PK
Sbjct: 65 VIQDT-HIINGKQVEIKRTIPK 85
Score = 40.0 bits (92), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 607 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVY 657
T + +HF KYGEI + + D TG+ RGF F+ + D +++ ++D +
Sbjct: 21 TAQFIKHFGKYGEITDSVIMKDRKTGQPRGFGFVTYADPSVVDQV-IQDTH 70
>gi|388580169|gb|EIM20486.1| RNA-binding domain-containing protein [Wallemia sebi CBS 633.66]
Length = 335
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 86/158 (54%), Gaps = 2/158 (1%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
+ L+ +FSK+G + + + DPNT RSRGF F+ F + +S++ + D +G +I+ K
Sbjct: 58 DSLRNYFSKFGNVVQLNIMRDPNTNRSRGFGFLTFDNLQSVQDVMIRDHWLDG-KLIDPK 116
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHF-AQFGNIIETEMPYDKSKSQRKNFCFIT 232
+ + K KIFVGG+ M E++ +F + FG + + + YDK + + F F+T
Sbjct: 117 RNMYRHENFKHKKIFVGGIPLTMPVEQVVENFESVFGQVTDANLMYDKETGRSRGFGFLT 176
Query: 233 FEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGVR 270
FE E D +K + + K V+VK+ + E G +
Sbjct: 177 FETEQQAEDAVKEGRFDLEGKSVEVKRVQTRNERSGTQ 214
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYF 658
D + L+ +FSK+G + + + DPNT RSRGF F+ F + +S++ + D +
Sbjct: 54 DTDEDSLRNYFSKFGNVVQLNIMRDPNTNRSRGFGFLTFDNLQSVQDVMIRDHWL 108
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 47/78 (60%), Gaps = 6/78 (7%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
KIF+GGL+ + ++ ++ +F++FGN+++ + D + ++ + F F+TF++ V D++
Sbjct: 45 KIFIGGLNWDTDEDSLRNYFSKFGNVVQLNIMRDPNTNRSRGFGFLTFDNLQSVQDVM-- 102
Query: 246 PKQKINDKEVDVKKATPK 263
I D +D K PK
Sbjct: 103 ----IRDHWLDGKLIDPK 116
Score = 42.0 bits (97), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 79/173 (45%), Gaps = 20/173 (11%)
Query: 348 ILLGAKNHNSDENPTSRSHPSQ--NAIKLYLTR--SSYREWGHVADNLLLCDNFPSIREL 403
I +G N ++DE+ + R++ S+ N ++L + R ++ R G L DN S++++
Sbjct: 46 IFIGGLNWDTDED-SLRNYFSKFGNVVQLNIMRDPNTNRSRGF---GFLTFDNLQSVQDV 101
Query: 404 EIPEAFLTKTTTVPMTTT------EHMVLVTGTDMMHMEVT------EAVPMEIIETEMP 451
I + +L P +H + G + M V E+V ++ + +
Sbjct: 102 MIRDHWLDGKLIDPKRNMYRHENFKHKKIFVGGIPLTMPVEQVVENFESVFGQVTDANLM 161
Query: 452 YDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGVR 504
YDK + + F F+TFE E D +K + + K V+VK+ + E G +
Sbjct: 162 YDKETGRSRGFGFLTFETEQQAEDAVKEGRFDLEGKSVEVKRVQTRNERSGTQ 214
>gi|427777643|gb|JAA54273.1| Putative heteroproteinous nuclear ribonucleoprotein at 87f
[Rhipicephalus pulchellus]
Length = 309
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 92/171 (53%), Gaps = 17/171 (9%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ +K TEE LK HF ++GE+ + + DP+T +SRGF FI F+ V+D A
Sbjct: 20 GLDYKTTEESLKGHFEQWGEVVDCVVMRDPSTKKSRGFGFITFRRAHM-----VDDAQAA 74
Query: 166 GNHVINNKKIEAKKA-----------KAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIET 214
H ++ +++E K+A +A K+FVGGL ++ + +++ +F+QFGNI+
Sbjct: 75 RPHKVDGREVEPKRAVPREEAGRPEAQATVKKVFVGGLKDDVDESDLRDYFSQFGNILSV 134
Query: 215 EMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE 265
+ +K +++ F F+ ++ V ++ + K +VKKA K E
Sbjct: 135 NLVTEKDTGRKRGFAFVEYDDYDPVDKIVLKRHHMLKGKRTEVKKALSKQE 185
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+F+GGL + +E +K HF Q+G +++ + D S + + F FITF +V D
Sbjct: 15 KLFIGGLDYKTTEESLKGHFEQWGEVVDCVVMRDPSTKKSRGFGFITFRRAHMVDDAQAA 74
Query: 246 PKQKINDKEVDVKKATPKPE 265
K++ +EV+ K+A P+ E
Sbjct: 75 RPHKVDGREVEPKRAVPREE 94
Score = 45.4 bits (106), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Query: 590 VEAKNKMVSHPGIVDKITE-ELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESL 648
+A K V G+ D + E +L+++FS++G I +V L ++ +TGR RGFAF+ + D + +
Sbjct: 100 AQATVKKVFVGGLKDDVDESDLRDYFSQFGNILSVNLVTEKDTGRKRGFAFVEYDDYDPV 159
Query: 649 EK 650
+K
Sbjct: 160 DK 161
Score = 44.7 bits (104), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASV 653
G+ K TEE LK HF ++GE+ + + DP+T +SRGF FI F+ ++ A
Sbjct: 20 GLDYKTTEESLKGHFEQWGEVVDCVVMRDPSTKKSRGFGFITFRRAHMVDDAQA 73
>gi|110767982|ref|XP_624411.2| PREDICTED: hypothetical protein LOC552027 [Apis mellifera]
gi|380027797|ref|XP_003697603.1| PREDICTED: uncharacterized protein LOC100868777 [Apis florea]
Length = 378
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 88/166 (53%), Gaps = 7/166 (4%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFK------DTESLEKASV 159
G+ ++ T++ LK+HF K+GEI +V + DP T RSRGF FI + D ++ V
Sbjct: 23 GLDYRTTDDSLKKHFEKWGEIVDVVVMKDPKTKRSRGFGFITYSRAHMVDDAQNARPHKV 82
Query: 160 EDVIAEGNHVINNKKIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYD 219
+ + E + ++I +A A K+FVGGL + +++++K +F +G I + D
Sbjct: 83 DGRVVEPKRAVPRQEIGRPEAGATVKKLFVGGLKDDHEEDDLKQYFQSYGTINSISIVTD 142
Query: 220 KSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPE 265
K +++ F F+ F+ V + +I K VDVKKA K E
Sbjct: 143 KETGKKRGFGFVEFDDYDPVDKICLQRNHQIRGKHVDVKKALSKAE 188
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 43/80 (53%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+F+GGL D+ +K HF ++G I++ + D + + F FIT+ +V D
Sbjct: 18 KLFIGGLDYRTTDDSLKKHFEKWGEIVDVVVMKDPKTKRSRGFGFITYSRAHMVDDAQNA 77
Query: 246 PKQKINDKEVDVKKATPKPE 265
K++ + V+ K+A P+ E
Sbjct: 78 RPHKVDGRVVEPKRAVPRQE 97
Score = 46.6 bits (109), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 28/45 (62%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKAS 652
+ LK+HF K+GEI +V + DP T RSRGF FI + ++ A
Sbjct: 31 DSLKKHFEKWGEIVDVVVMKDPKTKRSRGFGFITYSRAHMVDDAQ 75
Score = 43.5 bits (101), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 33/51 (64%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVE 654
D ++LK++F YG I ++++ +D TG+ RGF F+ F D + ++K ++
Sbjct: 118 DHEEDDLKQYFQSYGTINSISIVTDKETGKKRGFGFVEFDDYDPVDKICLQ 168
>gi|409049501|gb|EKM58978.1| hypothetical protein PHACADRAFT_249120 [Phanerochaete carnosa
HHB-10118-sp]
Length = 338
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 90/152 (59%), Gaps = 3/152 (1%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
E L+++FS++G++E T+ D GRSR FAF+ F+D S+ V + +G +I+ K
Sbjct: 13 ESLRKYFSQFGKVEACTIMRDA-AGRSRCFAFLTFEDPASVNAVMVREHFLDG-KIIDPK 70
Query: 174 KIEAKKAKAKSGKIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITF 233
+ ++ ++ K+F+GGL+ + E ++ F+QFG +++ + D+ + K F F++F
Sbjct: 71 RAIPRQEHQRATKLFIGGLAGSVTSESMREFFSQFGKVVDATVMLDRETGRSKGFGFVSF 130
Query: 234 EHESVVIDLLKNPKQKINDKEVDVKKATPKPE 265
E+ +V LL +I+ K +DVK A P+ +
Sbjct: 131 ENANVE-PLLGFGNLEIDGKIIDVKLAQPRSQ 161
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 49/81 (60%), Gaps = 7/81 (8%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ +T E ++E FS++G++ + T+ D TGRS+GF F+ S E A+VE ++
Sbjct: 88 GLAGSVTSESMREFFSQFGKVVDATVMLDRETGRSKGFGFV------SFENANVEPLLGF 141
Query: 166 GNHVINNKKIEAKKAKAKSGK 186
GN I+ K I+ K A+ +S +
Sbjct: 142 GNLEIDGKIIDVKLAQPRSQR 162
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 187 IFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNP 246
+F+GGL+ + DE ++ +F+QFG + + D + R F F+TFE + V ++
Sbjct: 1 MFIGGLNWDTTDESLRKYFSQFGKVEACTIMRDAAGRSR-CFAFLTFEDPASVNAVMVR- 58
Query: 247 KQKINDKEVDVKKATPKPE 265
+ ++ K +D K+A P+ E
Sbjct: 59 EHFLDGKIIDPKRAIPRQE 77
Score = 43.5 bits (101), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYF 658
D E L+++FS++G++E T+ D GRSR FAF+ F+D S+ V + +
Sbjct: 9 DTTDESLRKYFSQFGKVEACTIMRDA-AGRSRCFAFLTFEDPASVNAVMVREHFL 62
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 37/62 (59%), Gaps = 7/62 (11%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFY 659
G+ +T E ++E FS++G++ + T+ D TGRS+GF F+ S E A+VE + +
Sbjct: 88 GLAGSVTSESMREFFSQFGKVVDATVMLDRETGRSKGFGFV------SFENANVEPLLGF 141
Query: 660 SN 661
N
Sbjct: 142 GN 143
>gi|195573919|ref|XP_002104939.1| msi [Drosophila simulans]
gi|194200866|gb|EDX14442.1| msi [Drosophila simulans]
Length = 459
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/133 (40%), Positives = 77/133 (57%), Gaps = 13/133 (9%)
Query: 139 RSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNKKIEAKKAKAK--------SGKIFVG 190
RSRGF FI F+ E +VE V+ H ++ KKI+ K A K + KIFVG
Sbjct: 67 RSRGFGFITFQ-----EPCTVEKVLKVPIHTLDGKKIDPKHATPKNRPRQANKTKKIFVG 121
Query: 191 GLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKI 250
G+S + EE+KA+F+QFG + ET M D+ + + F F+TFE+E VV + + I
Sbjct: 122 GVSQDTSAEEVKAYFSQFGPVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTI 181
Query: 251 NDKEVDVKKATPK 263
+K+V+ KKA PK
Sbjct: 182 KNKKVECKKAQPK 194
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 40/74 (54%), Gaps = 7/74 (9%)
Query: 113 TEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGN-HVIN 171
EE+K +FS++G +E + D T R RGF F+ F E V D + E + H I
Sbjct: 129 AEEVKAYFSQFGPVEETVMLMDQQTKRHRGFGFVTF------ENEDVVDRVCEIHFHTIK 182
Query: 172 NKKIEAKKAKAKSG 185
NKK+E KKA+ K
Sbjct: 183 NKKVECKKAQPKEA 196
Score = 43.5 bits (101), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVYFYS 660
D EE+K +FS++G +E + D T R RGF F+ F++ + +++ V +++F++
Sbjct: 126 DTSAEEVKAYFSQFGPVEETVMLMDQQTKRHRGFGFVTFENEDVVDR--VCEIHFHT 180
>gi|326431512|gb|EGD77082.1| RNA binding protein [Salpingoeca sp. ATCC 50818]
Length = 386
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 93/174 (53%), Gaps = 29/174 (16%)
Query: 114 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAEGNHVINNK 173
E+L ++F K+G I + + +D RSRGF F+ FK E ASVE V+A G H I +
Sbjct: 33 EQLVDYFDKFGNIVDCVVMTDAQGTRSRGFGFVTFK-----EAASVEQVLASGPHEIAGR 87
Query: 174 KIEAKKAKAKSG---------------------KIFVGGLSPEMKDEEIKAHFAQFGNII 212
I+ K+A + K+F+GGL + K+EEIK F+++G++
Sbjct: 88 VIDPKRALPRHHHDDPHQQQQQQPQQHRQPRVRKVFLGGLPHDAKEEEIKDFFSKYGDVE 147
Query: 213 ETEMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQ---KINDKEVDVKKATPK 263
+ + YD+ + + F F+ FE+++ V L+ + ++ + K V++K+A PK
Sbjct: 148 DVIIQYDRISGRPRGFGFVVFENDATVDQLVTSSERVYVEFKGKRVEIKRAFPK 201
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 45/78 (57%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
KIFVG L P E++ +F +FGNI++ + D ++ + F F+TF+ + V +L +
Sbjct: 20 KIFVGSLDPRTTREQLVDYFDKFGNIVDCVVMTDAQGTRSRGFGFVTFKEAASVEQVLAS 79
Query: 246 PKQKINDKEVDVKKATPK 263
+I + +D K+A P+
Sbjct: 80 GPHEIAGRVIDPKRALPR 97
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 39/56 (69%), Gaps = 2/56 (3%)
Query: 604 DKITEELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK--ASVEDVY 657
D EE+K+ FSKYG++E+V ++ D +GR RGF F+VF++ ++++ S E VY
Sbjct: 130 DAKEEEIKDFFSKYGDVEDVIIQYDRISGRPRGFGFVVFENDATVDQLVTSSERVY 185
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 28/43 (65%)
Query: 608 EELKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
E+L ++F K+G I + + +D RSRGF F+ FK+ S+E+
Sbjct: 33 EQLVDYFDKFGNIVDCVVMTDAQGTRSRGFGFVTFKEAASVEQ 75
>gi|348519655|ref|XP_003447345.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 homolog
2-like [Oreochromis niloticus]
Length = 335
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 94/186 (50%), Gaps = 17/186 (9%)
Query: 107 GIVHKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKASVEDVIAE 165
G+ + TEE L+ HF ++G + + + DPN+ RSRGF F+ + V+D +
Sbjct: 19 GLSFETTEESLRAHFEQWGTLTDCVVMRDPNSKRSRGFGFVTYSSVRE-----VDDAMKA 73
Query: 166 GNHVINNKKIEAKKAKAKSG-----------KIFVGGLSPEMKDEEIKAHFAQFGNIIET 214
H ++ + +E K+A ++ KIFVGG+ + ++ I+ +F ++G I
Sbjct: 74 RPHKVDGRVVEPKRAVSREDSNKPGAHLTVKKIFVGGIKEDTEEYHIREYFEKYGKIECI 133
Query: 215 EMPYDKSKSQRKNFCFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGVRGGRG 274
++ ++S +++ FCF+TF+ V ++ IN +V+KA K E + RG
Sbjct: 134 DIMEERSTGKKRGFCFVTFDDHDTVDKIVAQKFHTINFHNCEVRKALSKQEMSAISNNRG 193
Query: 275 GRGGRG 280
GG G
Sbjct: 194 RSGGSG 199
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 46/80 (57%)
Query: 186 KIFVGGLSPEMKDEEIKAHFAQFGNIIETEMPYDKSKSQRKNFCFITFEHESVVIDLLKN 245
K+F+GGLS E +E ++AHF Q+G + + + D + + + F F+T+ V D +K
Sbjct: 14 KLFIGGLSFETTEESLRAHFEQWGTLTDCVVMRDPNSKRSRGFGFVTYSSVREVDDAMKA 73
Query: 246 PKQKINDKEVDVKKATPKPE 265
K++ + V+ K+A + +
Sbjct: 74 RPHKVDGRVVEPKRAVSRED 93
Score = 44.3 bits (103), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 36/52 (69%), Gaps = 2/52 (3%)
Query: 601 GIVDKITEE--LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEK 650
G + + TEE ++E+F KYG+IE + + + +TG+ RGF F+ F D ++++K
Sbjct: 109 GGIKEDTEEYHIREYFEKYGKIECIDIMEERSTGKKRGFCFVTFDDHDTVDK 160
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 601 GIVDKITEE-LKEHFSKYGEIENVTLKSDPNTGRSRGFAFIVFKDTESLEKA 651
G+ + TEE L+ HF ++G + + + DPN+ RSRGF F+ + ++ A
Sbjct: 19 GLSFETTEESLRAHFEQWGTLTDCVVMRDPNSKRSRGFGFVTYSSVREVDDA 70
Score = 39.7 bits (91), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 37/172 (21%), Positives = 65/172 (37%), Gaps = 37/172 (21%)
Query: 378 RSSYREWGHVADNLLLCD------------NFPSIRELEIPEAFLTKTTTVPMTTTEHMV 425
R+ + +WG + D +++ D + S+RE++ +A + V E
Sbjct: 30 RAHFEQWGTLTDCVVMRDPNSKRSRGFGFVTYSSVREVD--DAMKARPHKVDGRVVEPKR 87
Query: 426 LVTGTDM----MHMEVTEAVPMEIIETEMPY-------------------DKSKSQRKNF 462
V+ D H+ V + I E Y ++S +++ F
Sbjct: 88 AVSREDSNKPGAHLTVKKIFVGGIKEDTEEYHIREYFEKYGKIECIDIMEERSTGKKRGF 147
Query: 463 CFITFEHESVVIDLLKNPKQKINDKEVDVKKATPKPEPFGVRGGRGGRGGRG 514
CF+TF+ V ++ IN +V+KA K E + RG GG G
Sbjct: 148 CFVTFDDHDTVDKIVAQKFHTINFHNCEVRKALSKQEMSAISNNRGRSGGSG 199
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.316 0.136 0.406
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,795,919,115
Number of Sequences: 23463169
Number of extensions: 588862170
Number of successful extensions: 5242954
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 13715
Number of HSP's successfully gapped in prelim test: 13506
Number of HSP's that attempted gapping in prelim test: 3850572
Number of HSP's gapped (non-prelim): 1106714
length of query: 661
length of database: 8,064,228,071
effective HSP length: 149
effective length of query: 512
effective length of database: 8,863,183,186
effective search space: 4537949791232
effective search space used: 4537949791232
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 80 (35.4 bits)