Query psy15855
Match_columns 118
No_of_seqs 161 out of 1039
Neff 8.2
Searched_HMMs 29240
Date Fri Aug 16 23:06:41 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy15855.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/15855hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2r0j_A Ubiquitin carrier prote 100.0 1.5E-46 5.3E-51 254.5 14.0 117 1-117 31-147 (149)
2 4gpr_A Ubiquitin-conjugating e 100.0 2.7E-46 9.2E-51 253.8 15.2 117 1-117 34-150 (151)
3 2aak_A UBC1, ubiquitin conjuga 100.0 2.5E-46 8.4E-51 254.2 14.8 118 1-118 34-151 (152)
4 2ucz_A UBC7, ubiquitin conjuga 100.0 1.5E-46 5.2E-51 258.3 13.8 118 1-118 35-165 (165)
5 1ayz_A UBC2, ubiquitin-conjuga 100.0 2.2E-46 7.6E-51 258.3 14.6 117 1-117 34-150 (169)
6 3h8k_A Ubiquitin-conjugating e 100.0 2.8E-46 9.4E-51 256.7 14.9 117 1-117 34-163 (164)
7 2c2v_B Ubiquitin-conjugating e 100.0 1.2E-46 4.1E-51 256.3 12.5 117 1-117 35-151 (154)
8 2ayv_A Ubiquitin-conjugating e 100.0 5.1E-46 1.8E-50 255.9 15.0 116 1-116 51-166 (166)
9 1z2u_A Ubiquitin-conjugating e 100.0 6.2E-46 2.1E-50 251.7 14.5 117 1-117 34-150 (150)
10 2c4o_A Ubiquitin-conjugating e 100.0 9.2E-46 3.1E-50 254.4 15.0 117 1-117 49-165 (165)
11 1fxt_A Ubiquitin-conjugating e 100.0 3.3E-46 1.1E-50 252.9 12.0 117 1-117 32-149 (149)
12 2e2c_A Ubiquitin conjugating e 100.0 1.1E-45 3.7E-50 252.0 14.2 116 1-117 39-154 (156)
13 1zdn_A Ubiquitin-conjugating e 100.0 6.8E-46 2.3E-50 253.5 12.8 116 1-116 43-158 (158)
14 1yh2_A HSPC150 protein similar 100.0 2.2E-45 7.5E-50 253.4 15.2 117 1-117 34-154 (169)
15 1jat_A Ubiquitin-conjugating e 100.0 6.7E-46 2.3E-50 252.8 12.2 117 1-117 35-151 (155)
16 2bep_A Ubiquitin-conjugating e 100.0 2.7E-45 9.3E-50 250.7 15.1 117 1-117 41-158 (159)
17 1i7k_A Ubiquitin-conjugating e 100.0 1.2E-45 4.2E-50 256.5 12.8 116 1-117 60-175 (179)
18 2gjd_A Ubiquitin-conjugating e 100.0 3.2E-45 1.1E-49 250.0 14.5 117 1-117 39-157 (157)
19 2f4z_A Tgtwinscan_2721 - E2 do 100.0 3E-45 1E-49 257.1 14.6 118 1-118 75-193 (193)
20 3rcz_B SUMO-conjugating enzyme 100.0 6E-45 2.1E-49 249.9 14.6 116 1-116 45-162 (163)
21 2grr_A Ubiquitin-conjugating e 100.0 8.4E-45 2.9E-49 248.7 14.3 117 1-117 42-160 (161)
22 3bzh_A Ubiquitin-conjugating e 100.0 1.2E-44 4E-49 254.4 15.0 116 1-116 78-193 (194)
23 3k9o_A Ubiquitin-conjugating e 100.0 1.4E-44 4.6E-49 255.4 15.1 117 1-117 38-155 (201)
24 2onu_A Ubiquitin-conjugating e 100.0 3.9E-45 1.3E-49 248.4 11.0 117 1-117 29-147 (152)
25 2y9m_A Ubiquitin-conjugating e 100.0 2.3E-44 7.8E-49 248.9 14.5 117 1-117 48-168 (172)
26 1y8x_A Ubiquitin-conjugating e 100.0 1.5E-44 5E-49 247.3 13.3 115 1-116 35-149 (160)
27 2pwq_A Ubiquitin conjugating e 100.0 8.9E-45 3E-49 258.5 12.6 117 1-117 53-170 (216)
28 3rz3_A Ubiquitin-conjugating e 100.0 1.1E-44 3.8E-49 252.6 12.6 117 1-117 38-173 (183)
29 1wzv_A Ubiquitin-conjugating e 100.0 2.2E-44 7.6E-49 245.3 12.9 116 1-117 35-151 (155)
30 2z5d_A Ubiquitin-conjugating e 100.0 8.7E-45 3E-49 252.1 10.7 117 1-117 51-169 (179)
31 1tte_A Ubiquitin-conjugating e 100.0 8.4E-45 2.9E-49 258.5 9.8 117 1-117 33-150 (215)
32 2nvu_C NEDD8-conjugating enzym 100.0 4.2E-44 1.4E-48 249.1 12.9 115 1-116 55-169 (180)
33 1yrv_A Ubiquitin-conjugating l 100.0 2.4E-44 8.1E-49 248.2 11.2 113 1-114 53-168 (169)
34 1yf9_A Ubiquitin carrier prote 100.0 3.3E-44 1.1E-48 247.9 11.2 117 1-117 38-156 (171)
35 3fn1_B NEDD8-conjugating enzym 100.0 1.4E-43 4.7E-48 243.9 14.2 116 1-117 45-167 (167)
36 2awf_A Ubiquitin-conjugating e 100.0 2.6E-44 9E-49 248.6 10.6 111 1-111 48-172 (172)
37 3e46_A Ubiquitin-conjugating e 100.0 2E-43 6.9E-48 256.4 15.1 117 1-117 90-207 (253)
38 1c4z_D UBCH7, ubiquitin conjug 100.0 7.7E-44 2.6E-48 242.4 10.5 116 1-117 33-149 (154)
39 3o2u_A NEDD8-conjugating enzym 100.0 7.7E-43 2.6E-47 244.5 12.5 114 2-116 65-178 (190)
40 4ddg_A Ubiquitin-conjugating e 100.0 2.1E-41 7.2E-46 259.6 14.6 117 1-117 33-149 (399)
41 4ds2_A Ubiquitin-conjugating e 100.0 1.7E-40 5.7E-45 228.6 10.8 110 1-110 50-164 (167)
42 2q0v_A Ubiquitin-conjugating e 100.0 1.8E-39 6.3E-44 221.1 5.6 99 1-100 55-156 (156)
43 3ceg_A Baculoviral IAP repeat- 100.0 6.8E-38 2.3E-42 233.4 11.1 116 1-116 110-242 (323)
44 2a4d_A Ubiquitin-conjugating e 100.0 2E-37 6.8E-42 211.7 8.3 94 1-94 59-156 (160)
45 1jat_B Ubiquitin-conjugating e 100.0 1.9E-38 6.5E-43 212.3 2.6 96 1-97 40-138 (138)
46 2fo3_A Ubiquitin-conjugating e 100.0 2.2E-36 7.4E-41 199.3 10.3 87 1-87 36-123 (125)
47 2hlw_A Ubiquitin-conjugating e 100.0 4.5E-37 1.5E-41 211.9 5.3 94 1-94 69-166 (170)
48 2h2y_A Ubiquitin-conjugating e 100.0 1.1E-35 3.7E-40 198.6 10.8 85 1-85 50-135 (136)
49 2a7l_A Hypothetical ubiquitin- 100.0 9.7E-35 3.3E-39 193.9 10.1 81 1-81 54-136 (136)
50 2f4w_A Ubiquitin-conjugating e 100.0 2.3E-32 8E-37 190.9 11.9 103 1-105 44-152 (187)
51 1zuo_A Hypothetical protein LO 100.0 1.2E-34 4E-39 202.4 -0.4 108 1-116 60-181 (186)
52 2z6o_A UFM1-conjugating enzyme 99.9 1.2E-25 4.2E-30 152.6 2.9 91 1-99 56-161 (172)
53 3r3q_A Suppressor protein STP2 99.8 3.2E-21 1.1E-25 131.5 7.6 84 3-87 63-161 (162)
54 3kpa_A Probable ubiquitin fold 99.7 8E-18 2.7E-22 112.2 2.6 69 2-73 59-145 (168)
55 3obq_A Tumor susceptibility ge 99.6 1.7E-16 5.7E-21 106.5 6.1 76 1-82 54-138 (146)
56 2ebm_A RWD domain-containing p 95.2 0.038 1.3E-06 35.1 5.0 25 17-41 54-78 (128)
57 3zqs_A E3 ubiquitin-protein li 95.0 0.095 3.3E-06 36.0 6.8 51 16-80 36-86 (186)
58 2daw_A RWD domain containing p 94.1 0.17 5.8E-06 33.4 6.3 23 19-41 76-98 (154)
59 2yz0_A Serine/threonine-protei 93.9 0.19 6.5E-06 32.2 6.2 24 18-41 62-85 (138)
60 2day_A Ring finger protein 25; 93.9 0.21 7.1E-06 31.6 6.3 24 18-41 59-82 (128)
61 2ebk_A RWD domain-containing p 93.3 0.65 2.2E-05 29.2 7.8 23 18-40 56-78 (128)
62 1ukx_A GCN2, GCN2 EIF2alpha ki 92.5 0.081 2.8E-06 33.9 2.7 23 18-40 63-85 (137)
63 2dax_A Protein C21ORF6; RWD do 91.9 0.15 5.2E-06 33.4 3.5 23 19-41 74-96 (152)
64 2cwb_A Chimera of immunoglobul 70.4 0.89 3.1E-05 28.4 0.0 31 82-112 20-50 (108)
65 2bum_A Protocatechuate 3,4-dio 36.9 34 0.0012 23.5 3.4 25 16-40 109-138 (209)
66 2fkn_A Urocanate hydratase; ro 36.1 39 0.0013 26.6 4.0 27 90-116 277-303 (552)
67 1x87_A Urocanase protein; stru 35.8 40 0.0014 26.6 4.0 26 91-116 277-302 (551)
68 1uwk_A Urocanate hydratase; hy 35.4 41 0.0014 26.6 4.0 26 91-116 282-307 (557)
69 3rls_A YAF9, protein AF-9 homo 34.3 1E+02 0.0035 20.6 5.4 39 2-42 34-72 (175)
70 2jrw_A Cyclic extended PEP.1; 29.7 15 0.0005 16.3 0.4 14 33-46 6-19 (26)
71 4g2e_A Peroxiredoxin; redox pr 25.0 73 0.0025 19.8 3.4 32 48-79 125-156 (157)
72 2ccv_A Helix pomatia agglutini 23.6 1.2E+02 0.0042 18.0 4.2 26 16-42 27-52 (101)
73 4gqc_A Thiol peroxidase, perox 23.1 1E+02 0.0035 19.4 3.8 33 48-80 127-159 (164)
74 2cu9_A Spcia1, histone chapero 23.0 1.3E+02 0.0045 19.8 4.3 36 1-36 38-86 (161)
75 2f4m_B UV excision repair prot 22.8 96 0.0033 16.9 3.1 20 89-108 37-56 (61)
76 2bum_B Protocatechuate 3,4-dio 21.8 51 0.0017 23.2 2.2 26 16-41 134-166 (241)
77 2yzh_A Probable thiol peroxida 21.7 67 0.0023 20.1 2.7 33 48-80 139-171 (171)
78 3keb_A Probable thiol peroxida 21.4 79 0.0027 21.7 3.1 46 48-93 143-188 (224)
79 2xsu_A Catechol 1,2 dioxygenas 21.1 54 0.0018 24.0 2.3 25 16-40 187-229 (312)
80 1pve_A HHR23B, UV excision rep 20.8 76 0.0026 18.0 2.4 21 89-109 39-59 (72)
81 1roc_A Anti-silencing protein 20.1 1.5E+02 0.0053 19.4 4.1 33 1-33 39-84 (155)
No 1
>2r0j_A Ubiquitin carrier protein; ubiquitin conjugating, malaria, ligas conjugation pathway, structural genomics, structural genomi consortium; 1.85A {Plasmodium falciparum} PDB: 3e95_A
Probab=100.00 E-value=1.5e-46 Score=254.50 Aligned_cols=117 Identities=40% Similarity=0.782 Sum_probs=114.7
Q ss_pred CEEEEEEeCCCCCCCCCcEEEEEEEeCCCCCCCCCeeEEecccccceeeCCCcEEecCCCCCCCCCCCHHHHHHHHHHhh
Q psy15855 1 MIWNAVIFGPHDTPFEDGTFKLTVEFTEEYPNKPPTVRFASKMFHPNVYADGGICLDILQNRWSPTYDVSAILTSIQSLL 80 (118)
Q Consensus 1 ~~W~~~i~gp~~t~y~gg~f~~~i~fp~~yP~~pP~v~f~t~i~HPnv~~~g~icl~~l~~~W~p~~~i~~vl~~i~~ll 80 (118)
++|+++|.||+||||+||+|+++|.||++||++||+|+|.|++|||||+.+|.||+++|.++|+|+++|.+||.+|+++|
T Consensus 31 ~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll 110 (149)
T 2r0j_A 31 RHFNILINGPDGTPYEGGTYKLELFLPEQYPMEPPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALL 110 (149)
T ss_dssp EEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSCCCBTTBCTTCBBCCGGGTTTCCTTSCHHHHHHHHHHHH
T ss_pred cEEEEEEECCCCCCcCCCEEEEEEeCCcccCCCCCeeEeccCCccCCCCCCCEEechhcCCCCCCCCcHHHHHHHHHHHH
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhcc
Q psy15855 81 SDPNPNSPANSMAAQLYKENRREYEKRVKACVEQSFI 117 (118)
Q Consensus 81 ~~p~~~~p~n~~a~~~~~~~~~~f~~~v~~~~~~s~~ 117 (118)
.+|++++|+|.+||++|++|+++|+++||++++++.+
T Consensus 111 ~~p~~~~p~n~~aa~~~~~~~~~f~~~~~~~~~~~a~ 147 (149)
T 2r0j_A 111 SSPEPDDPLDSKVAEHFKQDKNDAEHVARQWNKIYAN 147 (149)
T ss_dssp HSCCTTSCSSCHHHHHHHHCHHHHHHHHHHHHHHHSC
T ss_pred hCCCCCCchhHHHHHHHHHCHHHHHHHHHHHHHHHcc
Confidence 9999999999999999999999999999999999875
No 2
>4gpr_A Ubiquitin-conjugating enzyme family protein; ubiquitin conjugation, EHU ehring1, thiol esterification, ligase; 1.60A {Entamoeba histolytica}
Probab=100.00 E-value=2.7e-46 Score=253.81 Aligned_cols=117 Identities=40% Similarity=0.826 Sum_probs=115.0
Q ss_pred CEEEEEEeCCCCCCCCCcEEEEEEEeCCCCCCCCCeeEEecccccceeeCCCcEEecCCCCCCCCCCCHHHHHHHHHHhh
Q psy15855 1 MIWNAVIFGPHDTPFEDGTFKLTVEFTEEYPNKPPTVRFASKMFHPNVYADGGICLDILQNRWSPTYDVSAILTSIQSLL 80 (118)
Q Consensus 1 ~~W~~~i~gp~~t~y~gg~f~~~i~fp~~yP~~pP~v~f~t~i~HPnv~~~g~icl~~l~~~W~p~~~i~~vl~~i~~ll 80 (118)
++|+++|.||+||+|+||+|+++|.||++||++||+|+|.|++|||||+.+|.||+++|.++|+|+++|.+||.+|+++|
T Consensus 34 ~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll 113 (151)
T 4gpr_A 34 FHWTATITGPDDSPYQGGLFFLDVHFPVDYPFKAPRVTFMTKVYHPNINKNGVICLDILKDQWSPALTLSRVLLSISSLL 113 (151)
T ss_dssp TEEEEEEECCSSSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBCTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHH
T ss_pred eEEEEEEeCCCCCCcCCCEEEEEEECCCCCCCCcceeEEecCcccceECCCCEEEcccccCCCCCCCcHHHHHHHHHHHh
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhcc
Q psy15855 81 SDPNPNSPANSMAAQLYKENRREYEKRVKACVEQSFI 117 (118)
Q Consensus 81 ~~p~~~~p~n~~a~~~~~~~~~~f~~~v~~~~~~s~~ 117 (118)
.+|++++|+|.+||++|++|+++|+++||++++++.+
T Consensus 114 ~~p~~~~p~n~~aa~~~~~d~~~f~~~ar~~~~~ya~ 150 (151)
T 4gpr_A 114 TDPNPSDPLDPEVANVLRANKKQFEDTAREWTRMYAR 150 (151)
T ss_dssp HCCCTTSCSSHHHHHHHHHCHHHHHHHHHHHHHHHCC
T ss_pred cCCCCCCchhHHHHHHHHHCHHHHHHHHHHHHHHhcC
Confidence 9999999999999999999999999999999999875
No 3
>2aak_A UBC1, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase; 2.40A {Arabidopsis thaliana} SCOP: d.20.1.1 PDB: 1jas_A 2y4w_A 2yb6_A 2ybf_A 1q34_A 1z3d_A
Probab=100.00 E-value=2.5e-46 Score=254.22 Aligned_cols=118 Identities=73% Similarity=1.298 Sum_probs=114.9
Q ss_pred CEEEEEEeCCCCCCCCCcEEEEEEEeCCCCCCCCCeeEEecccccceeeCCCcEEecCCCCCCCCCCCHHHHHHHHHHhh
Q psy15855 1 MIWNAVIFGPHDTPFEDGTFKLTVEFTEEYPNKPPTVRFASKMFHPNVYADGGICLDILQNRWSPTYDVSAILTSIQSLL 80 (118)
Q Consensus 1 ~~W~~~i~gp~~t~y~gg~f~~~i~fp~~yP~~pP~v~f~t~i~HPnv~~~g~icl~~l~~~W~p~~~i~~vl~~i~~ll 80 (118)
++|+++|.||+||+|+||+|+++|.||++||++||+|+|.|++|||||+.+|.||+++|.++|+|+++|.+||.+|+++|
T Consensus 34 ~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll 113 (152)
T 2aak_A 34 MLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLL 113 (152)
T ss_dssp EEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTTBCTTSBBCCGGGTTSCCTTCCHHHHHHHHHHHH
T ss_pred cEEEEEEeCCCCCCccCCEEEEEEECCCCCCCCCCEEEEecCcccCCCCCCCEEechhhcCCCCCCCcHHHHHHHHHHHH
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhccC
Q psy15855 81 SDPNPNSPANSMAAQLYKENRREYEKRVKACVEQSFID 118 (118)
Q Consensus 81 ~~p~~~~p~n~~a~~~~~~~~~~f~~~v~~~~~~s~~~ 118 (118)
.+|++++|+|.+||++|++|+++|+++||++++++.++
T Consensus 114 ~~p~~~~p~n~~aa~~~~~~~~~y~~~~~~~~~~~a~~ 151 (152)
T 2aak_A 114 CDPNPNSPANSEAARMYSESKREYNRRVRDVVEQSWTA 151 (152)
T ss_dssp TSCCTTSCSSHHHHHHHHHCHHHHHHHHHHHHHHHCC-
T ss_pred hCCCCCccccHHHHHHHHHCHHHHHHHHHHHHHHHccc
Confidence 99999999999999999999999999999999999764
No 4
>2ucz_A UBC7, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase, yeast; 2.93A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=100.00 E-value=1.5e-46 Score=258.27 Aligned_cols=118 Identities=43% Similarity=0.871 Sum_probs=114.8
Q ss_pred CEEEEEEeCCCCCCCCCcEEEEEEEeCCCCCCCCCeeEEecccccceeeCCCcEEecCC-------------CCCCCCCC
Q psy15855 1 MIWNAVIFGPHDTPFEDGTFKLTVEFTEEYPNKPPTVRFASKMFHPNVYADGGICLDIL-------------QNRWSPTY 67 (118)
Q Consensus 1 ~~W~~~i~gp~~t~y~gg~f~~~i~fp~~yP~~pP~v~f~t~i~HPnv~~~g~icl~~l-------------~~~W~p~~ 67 (118)
++|+++|.||+||+|+||+|+++|.||++||++||+|+|.|++|||||+.+|.||+++| .++|+|++
T Consensus 35 ~~w~~~i~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPNv~~~G~iCl~iL~~~~~~~~~~~~~~~~W~p~~ 114 (165)
T 2ucz_A 35 FIWDCLIQGPPDTPYADGVFNAKLEFPKDYPLSPPKLTFTPSILHPNIYPNGEVCISILHSPGDDPNMYELAEERWSPVQ 114 (165)
T ss_dssp SEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCSCTTBCTTSBBCCGGGSCCCSCTTSTTTTTTSCCTTC
T ss_pred cEEEEEEECCCCCCccCcEEEEEEECCccCCCCCCEEEEeCCCccCCCCCCCcEeehhhCCccccccccCCCCCCCCCcC
Confidence 58999999999999999999999999999999999999999999999999999999999 67899999
Q ss_pred CHHHHHHHHHHhhcCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhccC
Q psy15855 68 DVSAILTSIQSLLSDPNPNSPANSMAAQLYKENRREYEKRVKACVEQSFID 118 (118)
Q Consensus 68 ~i~~vl~~i~~ll~~p~~~~p~n~~a~~~~~~~~~~f~~~v~~~~~~s~~~ 118 (118)
+|.+||.+|+++|.+|++++|+|.+||++|++|+++|+++||+++++|+++
T Consensus 115 ~i~~vL~si~~ll~~Pn~~~p~n~~aa~~~~~~~~~y~~~v~~~~~~~~~~ 165 (165)
T 2ucz_A 115 SVEKILLSVMSMLSEPNIESGANIDACILWRDNRPEFERQVKLSILKSLGF 165 (165)
T ss_dssp CHHHHHHHHHHHHHSCCGGGCCCHHHHHHHHTTHHHHHHHHHHHHHHHTTC
T ss_pred cHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHCHHHHHHHHHHHHHHHhhC
Confidence 999999999999999999999999999999999999999999999999863
No 5
>1ayz_A UBC2, ubiquitin-conjugating enzyme RAD6; ubiquitin conjugation; 2.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=100.00 E-value=2.2e-46 Score=258.32 Aligned_cols=117 Identities=69% Similarity=1.220 Sum_probs=114.6
Q ss_pred CEEEEEEeCCCCCCCCCcEEEEEEEeCCCCCCCCCeeEEecccccceeeCCCcEEecCCCCCCCCCCCHHHHHHHHHHhh
Q psy15855 1 MIWNAVIFGPHDTPFEDGTFKLTVEFTEEYPNKPPTVRFASKMFHPNVYADGGICLDILQNRWSPTYDVSAILTSIQSLL 80 (118)
Q Consensus 1 ~~W~~~i~gp~~t~y~gg~f~~~i~fp~~yP~~pP~v~f~t~i~HPnv~~~g~icl~~l~~~W~p~~~i~~vl~~i~~ll 80 (118)
++|+++|.||+||||+||+|+++|.||++||++||+|+|.|+||||||+.+|.||+++|.+.|+|+++|.+||.+|++||
T Consensus 34 ~~W~~~I~GP~~tpYegG~f~l~i~fp~~YP~~PP~v~F~t~i~HPNI~~~G~ICl~iL~~~WsP~~~i~~vL~si~~ll 113 (169)
T 1ayz_A 34 MVWNAMIIGPADTPYEDGTFRLLLEFDEEYPNKPPHVKFLSEMFHPNVYANGEICLDILQNRWTPTYDVASILTSIQSLF 113 (169)
T ss_dssp EEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTTBCTTSBBCCGGGTTTCCTTCCHHHHHHHHHHHH
T ss_pred ccceEEEECCCCCCcCCCEEEEEEECcccCCCCCCccccccCCccCCCCCCCeEeehhhccCCCCcCcHHHHHHHHHHHH
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhcc
Q psy15855 81 SDPNPNSPANSMAAQLYKENRREYEKRVKACVEQSFI 117 (118)
Q Consensus 81 ~~p~~~~p~n~~a~~~~~~~~~~f~~~v~~~~~~s~~ 117 (118)
.+|++++|+|.+||.+|++++++|+++||++++++.+
T Consensus 114 ~~Pn~~~P~n~~aa~~~~~d~~~y~~~~r~~~~~~a~ 150 (169)
T 1ayz_A 114 NDPNPASPANVEAATLFKDHKSQYVKRVKETVEKSWE 150 (169)
T ss_dssp TCCCCSSCSSHHHHHHHHHCHHHHHHHHHHHHHHHHH
T ss_pred hCCCCCcHHHHHHHHHHHHCHHHHHHHHHHHHHHHcC
Confidence 9999999999999999999999999999999999874
No 6
>3h8k_A Ubiquitin-conjugating enzyme E2 G2; alpha beta, all alpha, ligase, UBL conjugation pathway, endo reticulum, membrane, metal-binding; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 3fsh_A 2cyx_A 2kly_A
Probab=100.00 E-value=2.8e-46 Score=256.72 Aligned_cols=117 Identities=43% Similarity=0.843 Sum_probs=114.5
Q ss_pred CEEEEEEeCCCCCCCCCcEEEEEEEeCCCCCCCCCeeEEecccccceeeCCCcEEecCCC-------------CCCCCCC
Q psy15855 1 MIWNAVIFGPHDTPFEDGTFKLTVEFTEEYPNKPPTVRFASKMFHPNVYADGGICLDILQ-------------NRWSPTY 67 (118)
Q Consensus 1 ~~W~~~i~gp~~t~y~gg~f~~~i~fp~~yP~~pP~v~f~t~i~HPnv~~~g~icl~~l~-------------~~W~p~~ 67 (118)
++|+++|.||+||||+||+|+++|.||++||++||+|+|.|++|||||+.+|.||+++|. ++|+|++
T Consensus 34 ~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPNV~~~G~iCl~iL~~~~~~~~~~~~~~~~W~p~~ 113 (164)
T 3h8k_A 34 FEWEALIMGPEDTCFEFGVFPAILSFPLDYPLSPPKMRFTCEMFHPNIYPDGRVCISILHAPGDDPMGYESSAERWSPVQ 113 (164)
T ss_dssp TEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCCTTBCTTSBBCCGGGSCSCSCCCSCCTTCCCCCTTC
T ss_pred cEEEEEEeCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEcCCCccCCCCCCCcEeeecccCcccccccccccccCCCCCC
Confidence 589999999999999999999999999999999999999999999999999999999997 7899999
Q ss_pred CHHHHHHHHHHhhcCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhcc
Q psy15855 68 DVSAILTSIQSLLSDPNPNSPANSMAAQLYKENRREYEKRVKACVEQSFI 117 (118)
Q Consensus 68 ~i~~vl~~i~~ll~~p~~~~p~n~~a~~~~~~~~~~f~~~v~~~~~~s~~ 117 (118)
+|.+||.+|+++|.+|++++|+|.+||++|++|+++|+++||+++++|++
T Consensus 114 ti~~vL~~i~~ll~~pn~~~p~n~~aa~~~~~~~~~f~~~~~~~~~~s~~ 163 (164)
T 3h8k_A 114 SVEKILLSVVSMLAEPNDESGANVDASKMWRDDREQFYKIAKQIVQKSLG 163 (164)
T ss_dssp CHHHHHHHHHHHHHSCCCSSCSSHHHHHHHHHCHHHHHHHHHHHHHHHHT
T ss_pred cHHHHHHHHHHHHcCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHhhc
Confidence 99999999999999999999999999999999999999999999999975
No 7
>2c2v_B Ubiquitin-conjugating enzyme E2 N; chaperone, heat-shock protein complex, E3 ligase, ubiquitiny TPR, heat-shock protein; 2.9A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=1.2e-46 Score=256.28 Aligned_cols=117 Identities=44% Similarity=0.786 Sum_probs=112.7
Q ss_pred CEEEEEEeCCCCCCCCCcEEEEEEEeCCCCCCCCCeeEEecccccceeeCCCcEEecCCCCCCCCCCCHHHHHHHHHHhh
Q psy15855 1 MIWNAVIFGPHDTPFEDGTFKLTVEFTEEYPNKPPTVRFASKMFHPNVYADGGICLDILQNRWSPTYDVSAILTSIQSLL 80 (118)
Q Consensus 1 ~~W~~~i~gp~~t~y~gg~f~~~i~fp~~yP~~pP~v~f~t~i~HPnv~~~g~icl~~l~~~W~p~~~i~~vl~~i~~ll 80 (118)
++|+++|.||+||+|+||+|+++|.||++||++||+|+|.|++|||||+.+|.||+++|.++|+|+++|.+||.+|+++|
T Consensus 35 ~~w~~~i~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll 114 (154)
T 2c2v_B 35 RYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDKLGRICLDILKDKWSPALQIRTVLLSIQALL 114 (154)
T ss_dssp TEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCCTTBCTTCBBCCHHHHTSCCTTCCHHHHHHHHHHHT
T ss_pred heEEEEEECCCCCCcCCCeEEEEEEcCCCCCCCCCEEEeecCcccCcCccCCeEEchhccCCCCCCCcHHHHHHHHHHHH
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhcc
Q psy15855 81 SDPNPNSPANSMAAQLYKENRREYEKRVKACVEQSFI 117 (118)
Q Consensus 81 ~~p~~~~p~n~~a~~~~~~~~~~f~~~v~~~~~~s~~ 117 (118)
.+|++++|+|.+||++|++|+++|.++||++++++..
T Consensus 115 ~~pn~~~p~n~~aa~~~~~d~~~f~~~ar~~~~~~a~ 151 (154)
T 2c2v_B 115 SAPNPDDPLANDVAEQWKTNEAQAIETARAWTRLYAM 151 (154)
T ss_dssp TSCCCCCC--CHHHHHHHHHHHHHHHHHHHHHHHHSS
T ss_pred hCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhcC
Confidence 9999999999999999999999999999999999875
No 8
>2ayv_A Ubiquitin-conjugating enzyme E2; structural genomics, structural genomics consortium, ubiquit ubiquitin-conjugating enzyme, SGC, ligase; 2.00A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=100.00 E-value=5.1e-46 Score=255.85 Aligned_cols=116 Identities=43% Similarity=0.925 Sum_probs=113.6
Q ss_pred CEEEEEEeCCCCCCCCCcEEEEEEEeCCCCCCCCCeeEEecccccceeeCCCcEEecCCCCCCCCCCCHHHHHHHHHHhh
Q psy15855 1 MIWNAVIFGPHDTPFEDGTFKLTVEFTEEYPNKPPTVRFASKMFHPNVYADGGICLDILQNRWSPTYDVSAILTSIQSLL 80 (118)
Q Consensus 1 ~~W~~~i~gp~~t~y~gg~f~~~i~fp~~yP~~pP~v~f~t~i~HPnv~~~g~icl~~l~~~W~p~~~i~~vl~~i~~ll 80 (118)
++|+++|.||+||||+||+|+++|.||++||++||+|+|.|++|||||+.+|.||+++|.++|+|+++|.+||.+|+++|
T Consensus 51 ~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNI~~~G~ICL~iL~~~WsP~~ti~~vL~sI~sll 130 (166)
T 2ayv_A 51 FHWQATIMGPEDSPYSGGVFFLNIHFPSDYPFKPPKVNFTTKIYHPNINSQGAICLDILKDQWSPALTISKVLLSISSLL 130 (166)
T ss_dssp TEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCBTTBCTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHH
T ss_pred ceeeEEEECCCCCCcCCCEEEEEEeCCCcCCCCCceeeeccCCcCCcCCCCCeEEcccccccCCCCCcHHHHHHHHHHHH
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhc
Q psy15855 81 SDPNPNSPANSMAAQLYKENRREYEKRVKACVEQSF 116 (118)
Q Consensus 81 ~~p~~~~p~n~~a~~~~~~~~~~f~~~v~~~~~~s~ 116 (118)
.+|++++|+|.+||++|++|+++|.++||+++++++
T Consensus 131 ~~pn~~~Pln~~aa~l~~~d~~~f~~~ar~~~~~~A 166 (166)
T 2ayv_A 131 TDPNPDDPLVPEIAHLYKSDRMRYDQTAREWSQKYA 166 (166)
T ss_dssp HSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHC
T ss_pred hCCCCCchhhHHHHHHHHHCHHHHHHHHHHHHHHhC
Confidence 999999999999999999999999999999999864
No 9
>1z2u_A Ubiquitin-conjugating enzyme E2 2; PSI, secsg, proteosome pathway, structural genomics, protein structure initiative; 1.10A {Caenorhabditis elegans} SCOP: d.20.1.1 PDB: 3tgd_A 2esk_A 1ur6_A 1w4u_A 4a49_B* 4a4b_C* 4a4c_C* 3eb6_B 3l1y_A 2esp_A 2eso_A 2esq_A 3l1z_A 2oxq_A 3a33_A 4ddg_D 4ddi_D 1x23_A 3rpg_A 2fuh_A ...
Probab=100.00 E-value=6.2e-46 Score=251.75 Aligned_cols=117 Identities=41% Similarity=0.902 Sum_probs=114.2
Q ss_pred CEEEEEEeCCCCCCCCCcEEEEEEEeCCCCCCCCCeeEEecccccceeeCCCcEEecCCCCCCCCCCCHHHHHHHHHHhh
Q psy15855 1 MIWNAVIFGPHDTPFEDGTFKLTVEFTEEYPNKPPTVRFASKMFHPNVYADGGICLDILQNRWSPTYDVSAILTSIQSLL 80 (118)
Q Consensus 1 ~~W~~~i~gp~~t~y~gg~f~~~i~fp~~yP~~pP~v~f~t~i~HPnv~~~g~icl~~l~~~W~p~~~i~~vl~~i~~ll 80 (118)
++|+++|.||+||+|+||+|+++|.||++||++||+|+|.|++|||||+.+|.||+++|.++|+|+++|.+||.+|+++|
T Consensus 34 ~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll 113 (150)
T 1z2u_A 34 FHWQATIMGPPESPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLL 113 (150)
T ss_dssp EEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBCTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHH
T ss_pred eEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCcEEEEecCcccCcCCCCCeEeeccccCCCCCCCCHHHHHHHHHHHh
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhcc
Q psy15855 81 SDPNPNSPANSMAAQLYKENRREYEKRVKACVEQSFI 117 (118)
Q Consensus 81 ~~p~~~~p~n~~a~~~~~~~~~~f~~~v~~~~~~s~~ 117 (118)
.+|++++|+|.+||++|++|+++|.++||++++++.+
T Consensus 114 ~~pn~~~p~n~~aa~~~~~~~~~f~~~~~~~~~~~a~ 150 (150)
T 1z2u_A 114 CDPNPDDPLVPEIARIYKTDRERYNQLAREWTQKYAM 150 (150)
T ss_dssp HSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHCC
T ss_pred hCCCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 9999999999999999999999999999999998763
No 10
>2c4o_A Ubiquitin-conjugating enzyme E2 D2; thioesterification, ligase, UBL conjugation pathway; HET: CME; 1.94A {Homo sapiens} SCOP: d.20.1.1 PDB: 2clw_A* 2c4p_A
Probab=100.00 E-value=9.2e-46 Score=254.40 Aligned_cols=117 Identities=42% Similarity=0.919 Sum_probs=114.3
Q ss_pred CEEEEEEeCCCCCCCCCcEEEEEEEeCCCCCCCCCeeEEecccccceeeCCCcEEecCCCCCCCCCCCHHHHHHHHHHhh
Q psy15855 1 MIWNAVIFGPHDTPFEDGTFKLTVEFTEEYPNKPPTVRFASKMFHPNVYADGGICLDILQNRWSPTYDVSAILTSIQSLL 80 (118)
Q Consensus 1 ~~W~~~i~gp~~t~y~gg~f~~~i~fp~~yP~~pP~v~f~t~i~HPnv~~~g~icl~~l~~~W~p~~~i~~vl~~i~~ll 80 (118)
++|+++|.||+||+|+||+|+++|.||++||++||+|+|.|+||||||+.+|.||+++|.++|+|+++|.+||.+|+++|
T Consensus 49 ~~W~~~I~GP~~TpYegg~f~l~i~fp~~YP~~PP~v~F~T~i~HPnV~~~G~ICl~iL~~~W~P~~ti~~vL~si~~ll 128 (165)
T 2c4o_A 49 FHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLL 128 (165)
T ss_dssp TEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCBTTBCTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHH
T ss_pred ceeEEEEECCCCCCccCceEEEEEECCCcCCCCCCEEEEecCCcCCcCCCCCeEeehhhcCCCCCcCcHHHHHHHHHHHH
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhcc
Q psy15855 81 SDPNPNSPANSMAAQLYKENRREYEKRVKACVEQSFI 117 (118)
Q Consensus 81 ~~p~~~~p~n~~a~~~~~~~~~~f~~~v~~~~~~s~~ 117 (118)
.+|++++|+|.+||++|++|+++|+++||++++++.+
T Consensus 129 ~~pn~~~P~n~~aa~~~~~d~~~y~~~ar~~~~~~a~ 165 (165)
T 2c4o_A 129 CDPNPDDPLVPEIARIYKTDREKYNRIAREWTQKYAM 165 (165)
T ss_dssp HSCCTTSCSSHHHHHHHHHCHHHHHHHHHHHHHHTTC
T ss_pred hCCCCCccccHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 9999999999999999999999999999999998753
No 11
>1fxt_A Ubiquitin-conjugating enzyme E2-24 kDa; ligase; NMR {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1fzy_A
Probab=100.00 E-value=3.3e-46 Score=252.87 Aligned_cols=117 Identities=38% Similarity=0.746 Sum_probs=114.0
Q ss_pred CEEEEEEeCCCCCCCCCcEEEEEEEeCCCCCCCCCeeEEecccccceeeC-CCcEEecCCCCCCCCCCCHHHHHHHHHHh
Q psy15855 1 MIWNAVIFGPHDTPFEDGTFKLTVEFTEEYPNKPPTVRFASKMFHPNVYA-DGGICLDILQNRWSPTYDVSAILTSIQSL 79 (118)
Q Consensus 1 ~~W~~~i~gp~~t~y~gg~f~~~i~fp~~yP~~pP~v~f~t~i~HPnv~~-~g~icl~~l~~~W~p~~~i~~vl~~i~~l 79 (118)
++|+++|.||+||||+||+|+++|.||++||++||+|+|.|++|||||+. +|.||+++|.++|+|+++|.+||.+|+++
T Consensus 32 ~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPni~~~~G~iCl~iL~~~W~p~~~i~~vl~~i~~l 111 (149)
T 1fxt_A 32 HHLKGTFLGPPGTPYEGGKFVVDIEVPMEYPFKPPKMQFDTKVYHPNISSVTGAICLDILKNAWSPVITLKSALISLQAL 111 (149)
T ss_dssp SEEEEEEECCSSSTTCSSEEEEEEECCTTTTSSCCEEEESSCCCBTTBCSSSCCBCCHHHHTSCCTTCCHHHHHHHHHHH
T ss_pred eEEEEEEECCCCCCcCCcEEEEEEECCCCCCCCCCEEEEeCCCccCCCcCCCCeEeCCcCCCCCCCCCcHHHHHHHHHHH
Confidence 58999999999999999999999999999999999999999999999997 99999999999999999999999999999
Q ss_pred hcCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhcc
Q psy15855 80 LSDPNPNSPANSMAAQLYKENRREYEKRVKACVEQSFI 117 (118)
Q Consensus 80 l~~p~~~~p~n~~a~~~~~~~~~~f~~~v~~~~~~s~~ 117 (118)
|.+|++++|+|.+||++|++|+++|.++||++++++.+
T Consensus 112 l~~p~~~~p~n~~aa~~~~~d~~~f~~~a~~~~~~~a~ 149 (149)
T 1fxt_A 112 LQSPEPNDPQDAEVAQHYLRDRESFNKTAALWTRLYAS 149 (149)
T ss_dssp HHSCCSSSCSSHHHHHHHHHCSSHHHHHHHHHHHHHCC
T ss_pred HhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhcC
Confidence 99999999999999999999999999999999998753
No 12
>2e2c_A Ubiquitin conjugating enzyme; ubiquitin conjugation, ubiquitin carrier protein, thioester ligase; 2.00A {Spisula solidissima} SCOP: d.20.1.1
Probab=100.00 E-value=1.1e-45 Score=252.01 Aligned_cols=116 Identities=45% Similarity=0.832 Sum_probs=113.5
Q ss_pred CEEEEEEeCCCCCCCCCcEEEEEEEeCCCCCCCCCeeEEecccccceeeCCCcEEecCCCCCCCCCCCHHHHHHHHHHhh
Q psy15855 1 MIWNAVIFGPHDTPFEDGTFKLTVEFTEEYPNKPPTVRFASKMFHPNVYADGGICLDILQNRWSPTYDVSAILTSIQSLL 80 (118)
Q Consensus 1 ~~W~~~i~gp~~t~y~gg~f~~~i~fp~~yP~~pP~v~f~t~i~HPnv~~~g~icl~~l~~~W~p~~~i~~vl~~i~~ll 80 (118)
++|+++|.||+||+|+||+|+++|.||++||++||+|+|.|++|||||+.+|.||+++|.++|+|+++|.+||.+|+++|
T Consensus 39 ~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~G~iCl~iL~~~W~p~~~i~~vL~si~~ll 118 (156)
T 2e2c_A 39 FKWVATLDGPKDTVYESLKYKLTLEFPSDYPYKPPVVKFTTPCWHPNVDQSGNICLDILKENWTASYDVRTILLSLQSLL 118 (156)
T ss_dssp TEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBCTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHT
T ss_pred cEEEEEEECCCCCCcCCcEEEEEEECCCCCCCCCCEEEEeCCcccCCCccCceEECccccccCCCCCcHHHHHHHHHHHH
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhcc
Q psy15855 81 SDPNPNSPANSMAAQLYKENRREYEKRVKACVEQSFI 117 (118)
Q Consensus 81 ~~p~~~~p~n~~a~~~~~~~~~~f~~~v~~~~~~s~~ 117 (118)
.+|++++|+|.+||++| +|+++|+++||++++++..
T Consensus 119 ~~pn~~~p~n~~aa~~~-~d~~~y~~~~~~~~~~~~~ 154 (156)
T 2e2c_A 119 GEPNNASPLNAQAADMW-SNQTEYKKVLHEKYKTAQS 154 (156)
T ss_dssp TSCCCSSCSCHHHHHHT-TCHHHHHHHHHHHHHHHHH
T ss_pred hCCCCCCHHHHHHHHHh-cCHHHHHHHHHHHHHHhcc
Confidence 99999999999999999 8999999999999999864
No 13
>1zdn_A Ubiquitin-conjugating enzyme E2S; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC; 1.93A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=6.8e-46 Score=253.49 Aligned_cols=116 Identities=34% Similarity=0.663 Sum_probs=113.5
Q ss_pred CEEEEEEeCCCCCCCCCcEEEEEEEeCCCCCCCCCeeEEecccccceeeCCCcEEecCCCCCCCCCCCHHHHHHHHHHhh
Q psy15855 1 MIWNAVIFGPHDTPFEDGTFKLTVEFTEEYPNKPPTVRFASKMFHPNVYADGGICLDILQNRWSPTYDVSAILTSIQSLL 80 (118)
Q Consensus 1 ~~W~~~i~gp~~t~y~gg~f~~~i~fp~~yP~~pP~v~f~t~i~HPnv~~~g~icl~~l~~~W~p~~~i~~vl~~i~~ll 80 (118)
++|+++|.||+||||+||+|+++|.||++||++||+|+|.|++|||||+.+|.||+++|.++|+|+++|.+||.+|+++|
T Consensus 43 ~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~G~iCl~iL~~~W~p~~~i~~vL~~i~~ll 122 (158)
T 1zdn_A 43 TDLQVTIEGPEGTPYAGGLFRMKLLLGKDFPASPPKGYFLTKIFHPNVGANGEICVNVLKRDWTAELGIRHVLLTIKCLL 122 (158)
T ss_dssp TEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTTBCTTSBBCHHHHTTTCCTTCCHHHHHHHHHHHH
T ss_pred hheeEEEECCCCCCccCcEEEEEEEcCCCCCCCCCEEEeccCcccCCCCCCCEEehhhcCCCCCCCCcHHHHHHHHHHHH
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhc
Q psy15855 81 SDPNPNSPANSMAAQLYKENRREYEKRVKACVEQSF 116 (118)
Q Consensus 81 ~~p~~~~p~n~~a~~~~~~~~~~f~~~v~~~~~~s~ 116 (118)
.+|++++|+|.+||++|++|+++|+++||+++++++
T Consensus 123 ~~pn~~~p~n~~aa~~~~~d~~~f~~~a~~~t~~~A 158 (158)
T 1zdn_A 123 IHPNPESALNEEAGRLLLENYEEYAARARLLTEIHG 158 (158)
T ss_dssp HSCCGGGCSSHHHHHHHHHCHHHHHHHHHHHHHHHC
T ss_pred hCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhC
Confidence 999999999999999999999999999999999864
No 14
>1yh2_A HSPC150 protein similar to ubiquitin-conjugating enzyme; structural genomics consortium, HSCP150, ligase, SGC; 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=2.2e-45 Score=253.39 Aligned_cols=117 Identities=38% Similarity=0.735 Sum_probs=114.5
Q ss_pred CEEEEEEeCCCCCCCCCcEEEEEEEeCCCCCCCCCeeEEecccccceeeCCCcEEecCCC----CCCCCCCCHHHHHHHH
Q psy15855 1 MIWNAVIFGPHDTPFEDGTFKLTVEFTEEYPNKPPTVRFASKMFHPNVYADGGICLDILQ----NRWSPTYDVSAILTSI 76 (118)
Q Consensus 1 ~~W~~~i~gp~~t~y~gg~f~~~i~fp~~yP~~pP~v~f~t~i~HPnv~~~g~icl~~l~----~~W~p~~~i~~vl~~i 76 (118)
++|+++|.||+||+|+||+|+++|.||++||++||+|+|.|++|||||+.+|.||+++|. ++|+|+++|.+||.+|
T Consensus 34 ~~w~~~I~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPNv~~~G~iCl~iL~~~~~~~W~p~~~i~~vL~si 113 (169)
T 1yh2_A 34 DDLRAQILGGANTPYEKGVFKLEVIIPERYPFEPPQIRFLTPIYHPNIDSAGRICLDVLKLPPKGAWRPSLNIATVLTSI 113 (169)
T ss_dssp TEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBCTTCBBCCGGGSCTTTSCCCTTSCHHHHHHHH
T ss_pred heEEEEEECCCCCCccCCEEEEEEEeCCCCCCCCcEEEeecCCccccCCcCCeEecccccCCcccCCCCCCcHHHHHHHH
Confidence 589999999999999999999999999999999999999999999999999999999998 8999999999999999
Q ss_pred HHhhcCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhcc
Q psy15855 77 QSLLSDPNPNSPANSMAAQLYKENRREYEKRVKACVEQSFI 117 (118)
Q Consensus 77 ~~ll~~p~~~~p~n~~a~~~~~~~~~~f~~~v~~~~~~s~~ 117 (118)
+++|.+|++++|+|.+||++|++|+++|.++||+++++++.
T Consensus 114 ~~ll~~p~~~~p~n~~aa~~~~~~~~~y~~~~r~~~~~~a~ 154 (169)
T 1yh2_A 114 QLLMSEPNPDDPLMADISSEFKYNKPAFLKNARQWTEKHAR 154 (169)
T ss_dssp HHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHSC
T ss_pred HHHHhCCCCcchHhHHHHHHHHhhHHHHHHHHHHHHHHHcc
Confidence 99999999999999999999999999999999999999875
No 15
>1jat_A Ubiquitin-conjugating enzyme E2-17.5 kDa; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1jbb_A 2gmi_A 3hct_B 3hcu_B 4dhi_D 1j7d_B 4dhj_C 4dhz_F
Probab=100.00 E-value=6.7e-46 Score=252.82 Aligned_cols=117 Identities=35% Similarity=0.718 Sum_probs=114.5
Q ss_pred CEEEEEEeCCCCCCCCCcEEEEEEEeCCCCCCCCCeeEEecccccceeeCCCcEEecCCCCCCCCCCCHHHHHHHHHHhh
Q psy15855 1 MIWNAVIFGPHDTPFEDGTFKLTVEFTEEYPNKPPTVRFASKMFHPNVYADGGICLDILQNRWSPTYDVSAILTSIQSLL 80 (118)
Q Consensus 1 ~~W~~~i~gp~~t~y~gg~f~~~i~fp~~yP~~pP~v~f~t~i~HPnv~~~g~icl~~l~~~W~p~~~i~~vl~~i~~ll 80 (118)
++|+++|.||+||+|+||+|+++|.||++||++||+|+|.|++|||||+.+|.||+++|.++|+|+++|.+||.+|+++|
T Consensus 35 ~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll 114 (155)
T 1jat_A 35 RYFQVTIEGPEQSPYEDGIFELELYLPDDYPMEAPKVRFLTKIYHPNIDRLGRICLDVLKTNWSPALQIRTVLLSIQALL 114 (155)
T ss_dssp EEEEEEEECCTTSTTTTEEEEEEEECCTTTTTSCCEEEECSCCCBTTBCTTCCBCCGGGTTTCCTTCCHHHHHHHHHHHH
T ss_pred hEEEEEEECCCCCCccCcEEEEEEEcCCCCCCCCCcceeecccccCCCCCCCEEEchhhccCCCCCCCHHHHHHHHHHHH
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhcc
Q psy15855 81 SDPNPNSPANSMAAQLYKENRREYEKRVKACVEQSFI 117 (118)
Q Consensus 81 ~~p~~~~p~n~~a~~~~~~~~~~f~~~v~~~~~~s~~ 117 (118)
.+|++++|+|.+||++|++|+++|+++||++++++..
T Consensus 115 ~~p~~~~p~n~~aa~~~~~~~~~f~~~~r~~~~~~a~ 151 (155)
T 1jat_A 115 ASPNPNDPLANDVAEDWIKNEQGAKAKAREWTKLYAK 151 (155)
T ss_dssp HSCCTTSTTCCTTHHHHHHCHHHHHHHHHHHHHHHSE
T ss_pred hCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhcc
Confidence 9999999999999999999999999999999999864
No 16
>2bep_A Ubiquitin-conjugating enzyme E2-25 kDa; ligase, E2 conjugating enzyme, protein degradatio structural proteomics in europe, spine; 1.8A {Bos taurus} SCOP: d.20.1.1 PDB: 2bf8_A
Probab=100.00 E-value=2.7e-45 Score=250.71 Aligned_cols=117 Identities=34% Similarity=0.727 Sum_probs=114.2
Q ss_pred CEEEEEEeCCCCCCCCCcEEEEEEEeCCCCCCCCCeeEEecccccceee-CCCcEEecCCCCCCCCCCCHHHHHHHHHHh
Q psy15855 1 MIWNAVIFGPHDTPFEDGTFKLTVEFTEEYPNKPPTVRFASKMFHPNVY-ADGGICLDILQNRWSPTYDVSAILTSIQSL 79 (118)
Q Consensus 1 ~~W~~~i~gp~~t~y~gg~f~~~i~fp~~yP~~pP~v~f~t~i~HPnv~-~~g~icl~~l~~~W~p~~~i~~vl~~i~~l 79 (118)
++|+++|.||+||||+||+|+++|.||++||++||+|+|.|++|||||+ .+|.||+++|.++|+|+++|.+||.+|+++
T Consensus 41 ~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPni~~~~G~iCl~iL~~~W~p~~~i~~vl~~i~~l 120 (159)
T 2bep_A 41 TELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHPNISSVTGAICLDILKDQWAAAMTLRTVLLSLQAL 120 (159)
T ss_dssp SEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBCTTTCBBCCGGGTTTCCTTCCHHHHHHHHHHH
T ss_pred heEEEEEECCCCCCccCCEEEEEEeCCCcCCCCCCEEEeeCCCCccCCCCCCCEEeChhhhccCCCCCcHHHHHHHHHHH
Confidence 5899999999999999999999999999999999999999999999999 599999999999999999999999999999
Q ss_pred hcCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhcc
Q psy15855 80 LSDPNPNSPANSMAAQLYKENRREYEKRVKACVEQSFI 117 (118)
Q Consensus 80 l~~p~~~~p~n~~a~~~~~~~~~~f~~~v~~~~~~s~~ 117 (118)
|.+|++++|+|.+||++|++|+++|.++||++++++.+
T Consensus 121 l~~p~~~~p~n~~aa~~~~~~~~~f~~~a~~~~~~~a~ 158 (159)
T 2bep_A 121 LAAAEPDDPQDAVVANQYKQNPEMFKQTARLWAHVYAG 158 (159)
T ss_dssp HHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHSC
T ss_pred HhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhhc
Confidence 99999999999999999999999999999999999875
No 17
>1i7k_A Ubiquitin-conjugating enzyme E2 H10; ligase; 1.95A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=1.2e-45 Score=256.51 Aligned_cols=116 Identities=42% Similarity=0.763 Sum_probs=113.7
Q ss_pred CEEEEEEeCCCCCCCCCcEEEEEEEeCCCCCCCCCeeEEecccccceeeCCCcEEecCCCCCCCCCCCHHHHHHHHHHhh
Q psy15855 1 MIWNAVIFGPHDTPFEDGTFKLTVEFTEEYPNKPPTVRFASKMFHPNVYADGGICLDILQNRWSPTYDVSAILTSIQSLL 80 (118)
Q Consensus 1 ~~W~~~i~gp~~t~y~gg~f~~~i~fp~~yP~~pP~v~f~t~i~HPnv~~~g~icl~~l~~~W~p~~~i~~vl~~i~~ll 80 (118)
++|+++|.||+||+|+||+|+++|.||++||++||+|+|.|++|||||+.+|.||+++|.+.|+|+++|.+||.+|++||
T Consensus 60 ~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNV~~~G~ICL~iL~~~WsP~~ti~~vL~sI~sll 139 (179)
T 1i7k_A 60 FKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPCYHPNVDTQGNISLDILKEKWSALYDVRTILLSIQSLL 139 (179)
T ss_dssp EEEEEEEEBCTTSTTBTCEEEEEEECCTTTTTSCCEEEESSCCCSTTBCTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHH
T ss_pred cccEEEEECCCCCCcCCCEEEEEEECCCcCCCCCceEEEecCCccCccccCCeEEcccCcCcCCCCCCHHHHHHHHHHHH
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhcc
Q psy15855 81 SDPNPNSPANSMAAQLYKENRREYEKRVKACVEQSFI 117 (118)
Q Consensus 81 ~~p~~~~p~n~~a~~~~~~~~~~f~~~v~~~~~~s~~ 117 (118)
.+|++++|+|.+||++| +|+++|.++|++++++++.
T Consensus 140 ~~Pn~~~Pln~~aa~l~-~d~~~f~~~v~~~v~~~~~ 175 (179)
T 1i7k_A 140 GEPNIDSPLNTHAAELW-KNPTAFKKYLQETYSKQVT 175 (179)
T ss_dssp HSCCTTSCSCHHHHHHT-TSHHHHHHHHHHHHHTTCC
T ss_pred hCCCCcchhhHHHHHHh-hCHHHHHHHHHHHHHHHhc
Confidence 99999999999999999 9999999999999999875
No 18
>2gjd_A Ubiquitin-conjugating enzyme E2-18 kDa; UBC9P, SMT3, crystallography, ligase; 1.75A {Saccharomyces cerevisiae} PDB: 2eke_A 3ong_B
Probab=100.00 E-value=3.2e-45 Score=249.96 Aligned_cols=117 Identities=41% Similarity=0.788 Sum_probs=113.8
Q ss_pred CEEEEEEeCCCCCCCCCcEEEEEEEeCCCCCCCCCeeEEecccccceeeCCCcEEecCCCC--CCCCCCCHHHHHHHHHH
Q psy15855 1 MIWNAVIFGPHDTPFEDGTFKLTVEFTEEYPNKPPTVRFASKMFHPNVYADGGICLDILQN--RWSPTYDVSAILTSIQS 78 (118)
Q Consensus 1 ~~W~~~i~gp~~t~y~gg~f~~~i~fp~~yP~~pP~v~f~t~i~HPnv~~~g~icl~~l~~--~W~p~~~i~~vl~~i~~ 78 (118)
++|+++|.||+||+|+||+|+++|.||++||++||+|+|.|++|||||+.+|.||+++|.. +|+|+++|.+||.+|++
T Consensus 39 ~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~G~iCl~iL~~~~~W~p~~~i~~vl~~i~~ 118 (157)
T 2gjd_A 39 QKWEAGIPGKEGTNWAGGVYPITVEYPNEYPSKPPKVKFPAGFYHPNVYPSGTICLSILNEDQDWRPAITLKQIVLGVQD 118 (157)
T ss_dssp EEEEEEEECCTTSTTTTBEEEEEEECCTTTTTSCCEEECCTTCCCTTBCTTSBBCCGGGCTTTTCCTTCCHHHHHHHHHH
T ss_pred cEEEEEEECCCCCCcCCeEEEEEEEcCCCCCCCCCeeeccCCCccCCCCCCCcEeeecccCCCCCCCCCcHHHHHHHHHH
Confidence 4799999999999999999999999999999999999999999999999999999999987 79999999999999999
Q ss_pred hhcCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhcc
Q psy15855 79 LLSDPNPNSPANSMAAQLYKENRREYEKRVKACVEQSFI 117 (118)
Q Consensus 79 ll~~p~~~~p~n~~a~~~~~~~~~~f~~~v~~~~~~s~~ 117 (118)
+|.+|++++|+|.+||++|++|+++|.++||++++++.+
T Consensus 119 ll~~p~~~~p~n~~aa~~~~~~~~~y~~~~~~~~~~~a~ 157 (157)
T 2gjd_A 119 LLDSPNPNSPAQEPAWRSFSRNKAEYDKKVLLQAKQYSK 157 (157)
T ss_dssp HHTSCCTTCCCCHHHHHHHHHCHHHHHHHHHHHHHHTBC
T ss_pred HHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHhcC
Confidence 999999999999999999999999999999999999864
No 19
>2f4z_A Tgtwinscan_2721 - E2 domain; ubiquitin conjugating tgtwinscan_2721, structural genomics, structural genomics consortium, SGC; 2.11A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=100.00 E-value=3e-45 Score=257.14 Aligned_cols=118 Identities=36% Similarity=0.758 Sum_probs=114.4
Q ss_pred CEEEEEEeCCCCCCCCCcEEEEEEEeCCCCCCCCCeeEEecccccceee-CCCcEEecCCCCCCCCCCCHHHHHHHHHHh
Q psy15855 1 MIWNAVIFGPHDTPFEDGTFKLTVEFTEEYPNKPPTVRFASKMFHPNVY-ADGGICLDILQNRWSPTYDVSAILTSIQSL 79 (118)
Q Consensus 1 ~~W~~~i~gp~~t~y~gg~f~~~i~fp~~yP~~pP~v~f~t~i~HPnv~-~~g~icl~~l~~~W~p~~~i~~vl~~i~~l 79 (118)
++|+++|.||+||||+||+|+++|.||++||++||+|+|.|+||||||+ .+|.||+++|.++|+|+++|.+||.+|++|
T Consensus 75 ~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNI~~~~G~ICL~iL~~~WsP~~ti~~vL~sI~sl 154 (193)
T 2f4z_A 75 HRWRGFIAGPLGTPYEGGHFTLDIVIPPDYPYNPPKMKFVTKIWHPNISSQTGAICLDILKHEWSPALTIRTALLSIQAM 154 (193)
T ss_dssp EEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTTBCTTTCBBCCGGGTTTCCTTSCHHHHHHHHHHH
T ss_pred ceEEEEEeCCCCCCcCCCEEEEEEECCCcCCCCCCeEEEecCCccCCCcCCCCEEECccccccCCCCCCHHHHHHHHHHH
Confidence 4799999999999999999999999999999999999999999999999 699999999999999999999999999999
Q ss_pred hcCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhccC
Q psy15855 80 LSDPNPNSPANSMAAQLYKENRREYEKRVKACVEQSFID 118 (118)
Q Consensus 80 l~~p~~~~p~n~~a~~~~~~~~~~f~~~v~~~~~~s~~~ 118 (118)
|.+|++++|+|.+||++|++|+++|+++||++++++.++
T Consensus 155 l~~pnp~~P~n~~aa~l~~~d~~~f~~~ar~~t~~ya~~ 193 (193)
T 2f4z_A 155 LADPVPTDPQDAEVAKMMIENHPLFVQTAKLWTETFAKE 193 (193)
T ss_dssp HHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHCC-
T ss_pred HhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHHccC
Confidence 999999999999999999999999999999999998764
No 20
>3rcz_B SUMO-conjugating enzyme UBC9; SUMO-like domain, protein:protein interaction, protein ligase complex; HET: DNA; 1.90A {Schizosaccharomyces pombe} SCOP: d.20.1.1
Probab=100.00 E-value=6e-45 Score=249.88 Aligned_cols=116 Identities=46% Similarity=0.871 Sum_probs=112.8
Q ss_pred CEEEEEEeCCCCCCCCCcEEEEEEEeCCCCCCCCCeeEEecccccceeeCCCcEEecCCCCC--CCCCCCHHHHHHHHHH
Q psy15855 1 MIWNAVIFGPHDTPFEDGTFKLTVEFTEEYPNKPPTVRFASKMFHPNVYADGGICLDILQNR--WSPTYDVSAILTSIQS 78 (118)
Q Consensus 1 ~~W~~~i~gp~~t~y~gg~f~~~i~fp~~yP~~pP~v~f~t~i~HPnv~~~g~icl~~l~~~--W~p~~~i~~vl~~i~~ 78 (118)
++|+++|.||+||||+||+|+++|.||++||++||+|+|.|++|||||+.+|.||+++|... |+|+++|.+||.+|++
T Consensus 45 ~~W~~~I~Gp~~Tpyegg~f~l~i~fp~~YP~~pP~v~F~t~i~HPnV~~~G~iCl~iL~~~~~W~p~~ti~~vL~~i~~ 124 (163)
T 3rcz_B 45 MNWKVGIPGKPKTSWEGGLYKLTMAFPEEYPTRPPKCRFTPPLFHPNVYPSGTVCLSILNEEEGWKPAITIKQILLGIQD 124 (163)
T ss_dssp EEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCSTTBCTTSBBCCGGGCTTTTCCTTCCHHHHHHHHHH
T ss_pred cEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCCEEEEeCCCccCCCCCCCcEeccccCCCCCcCCcCcHHHHHHHHHH
Confidence 47999999999999999999999999999999999999999999999999999999999864 9999999999999999
Q ss_pred hhcCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhc
Q psy15855 79 LLSDPNPNSPANSMAAQLYKENRREYEKRVKACVEQSF 116 (118)
Q Consensus 79 ll~~p~~~~p~n~~a~~~~~~~~~~f~~~v~~~~~~s~ 116 (118)
+|.+|++++|+|.+||++|++|+++|+++||++++++.
T Consensus 125 ll~~P~~~~p~n~~aa~~~~~d~~~y~~~~r~~~~~ya 162 (163)
T 3rcz_B 125 LLDDPNIASPAQTEAYTMFKKDKVEYEKRVRAQARENA 162 (163)
T ss_dssp HHTSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHTC
T ss_pred HHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHhC
Confidence 99999999999999999999999999999999999875
No 21
>2grr_A Ubiquitin-conjugating enzyme E2 I; ubiquitin, conjugation, small ubiquitin like modifer, SMT3, ligase; 1.30A {Homo sapiens} PDB: 2grq_A 2grn_A 2pe6_A 2gro_A 2grp_A 1u9a_A 1u9b_A 2vrr_A 2px9_B 1z5s_A 2xwu_A 3uin_A 3uio_A 3uip_A* 1kps_A 2o25_C 1a3s_A 3a4s_A 2uyz_A
Probab=100.00 E-value=8.4e-45 Score=248.74 Aligned_cols=117 Identities=44% Similarity=0.852 Sum_probs=114.0
Q ss_pred CEEEEEEeCCCCCCCCCcEEEEEEEeCCCCCCCCCeeEEecccccceeeCCCcEEecCCCC--CCCCCCCHHHHHHHHHH
Q psy15855 1 MIWNAVIFGPHDTPFEDGTFKLTVEFTEEYPNKPPTVRFASKMFHPNVYADGGICLDILQN--RWSPTYDVSAILTSIQS 78 (118)
Q Consensus 1 ~~W~~~i~gp~~t~y~gg~f~~~i~fp~~yP~~pP~v~f~t~i~HPnv~~~g~icl~~l~~--~W~p~~~i~~vl~~i~~ 78 (118)
++|+++|.||+||+|+||+|+++|.||++||++||+|+|.|++|||||+.+|.||+++|.. +|+|+++|.+||.+|++
T Consensus 42 ~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~G~iCl~iL~~~~~W~p~~~i~~vl~~i~~ 121 (161)
T 2grr_A 42 MNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQE 121 (161)
T ss_dssp EEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCSTTBCTTSBBCCGGGCTTTTCCTTCCHHHHHHHHHH
T ss_pred cEEEEEEECCCCCCccCCEEEEEEEcCcccCCCCCEEEEecCcccCCCCCCCeEeehhcCCCCCcCCCCcHHHHHHHHHH
Confidence 4799999999999999999999999999999999999999999999999999999999986 79999999999999999
Q ss_pred hhcCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhcc
Q psy15855 79 LLSDPNPNSPANSMAAQLYKENRREYEKRVKACVEQSFI 117 (118)
Q Consensus 79 ll~~p~~~~p~n~~a~~~~~~~~~~f~~~v~~~~~~s~~ 117 (118)
+|.+|++++|+|.+||++|++|+++|+++||++++++.+
T Consensus 122 ll~~p~~~~p~n~~aa~~~~~~~~~y~~~~~~~~~~~a~ 160 (161)
T 2grr_A 122 LLNEPNIQSPAQAEAYTIYCQNRVEYEKRVRAQAKKFAP 160 (161)
T ss_dssp HHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHTCC
T ss_pred HHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999875
No 22
>3bzh_A Ubiquitin-conjugating enzyme E2 E1; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC, UBL conjugation pathway; 1.60A {Homo sapiens} PDB: 1y6l_A
Probab=100.00 E-value=1.2e-44 Score=254.37 Aligned_cols=116 Identities=40% Similarity=0.744 Sum_probs=114.0
Q ss_pred CEEEEEEeCCCCCCCCCcEEEEEEEeCCCCCCCCCeeEEecccccceeeCCCcEEecCCCCCCCCCCCHHHHHHHHHHhh
Q psy15855 1 MIWNAVIFGPHDTPFEDGTFKLTVEFTEEYPNKPPTVRFASKMFHPNVYADGGICLDILQNRWSPTYDVSAILTSIQSLL 80 (118)
Q Consensus 1 ~~W~~~i~gp~~t~y~gg~f~~~i~fp~~yP~~pP~v~f~t~i~HPnv~~~g~icl~~l~~~W~p~~~i~~vl~~i~~ll 80 (118)
++|+++|.||+||+|+||+|+|+|.||++||++||+|+|.|++|||||+.+|.||+++|.++|+|+++|.+||.+|++||
T Consensus 78 ~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNV~~~G~ICL~iL~~~WsP~~ti~~vL~sI~~ll 157 (194)
T 3bzh_A 78 YEWRSTILGPPGSVYEGGVFFLDITFTPEYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLL 157 (194)
T ss_dssp TEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTTBCTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHH
T ss_pred ccceEEEeCCCCCCccCCEEEEEEECCCcCCCCCccccccCCCccceECCCCceechhhhccCCCcCcHHHHHHHHHHHH
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhc
Q psy15855 81 SDPNPNSPANSMAAQLYKENRREYEKRVKACVEQSF 116 (118)
Q Consensus 81 ~~p~~~~p~n~~a~~~~~~~~~~f~~~v~~~~~~s~ 116 (118)
.+|++++|+|.+||++|++|+++|.++||++++++.
T Consensus 158 ~~pnp~~Pln~~aa~l~~~d~~~f~~~ar~~t~~ya 193 (194)
T 3bzh_A 158 TDCNPADPLVGSIATQYMTNRAEHDRMARQWTKRYA 193 (194)
T ss_dssp HSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHC
T ss_pred hCCCCccchhHHHHHHHHHCHHHHHHHHHHHHHHhh
Confidence 999999999999999999999999999999999875
No 23
>3k9o_A Ubiquitin-conjugating enzyme E2 K; E2-25K, complex structure, ATP-binding, isopeptide BO ligase, nucleotide-binding, UBL conjugation pathway; 1.80A {Homo sapiens} PDB: 3k9p_A 1yla_A 2o25_A
Probab=100.00 E-value=1.4e-44 Score=255.42 Aligned_cols=117 Identities=34% Similarity=0.727 Sum_probs=114.1
Q ss_pred CEEEEEEeCCCCCCCCCcEEEEEEEeCCCCCCCCCeeEEecccccceee-CCCcEEecCCCCCCCCCCCHHHHHHHHHHh
Q psy15855 1 MIWNAVIFGPHDTPFEDGTFKLTVEFTEEYPNKPPTVRFASKMFHPNVY-ADGGICLDILQNRWSPTYDVSAILTSIQSL 79 (118)
Q Consensus 1 ~~W~~~i~gp~~t~y~gg~f~~~i~fp~~yP~~pP~v~f~t~i~HPnv~-~~g~icl~~l~~~W~p~~~i~~vl~~i~~l 79 (118)
++|+++|.||+||||+||+|+++|.||++||++||+|+|.|+||||||+ .+|.||+++|.++|+|+++|.+||.+|+++
T Consensus 38 ~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~~~G~iCl~iL~~~W~p~~~i~~vL~~i~~l 117 (201)
T 3k9o_A 38 TELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHPNISSVTGAICLDILKDQWAAAMTLRTVLLSLQAL 117 (201)
T ss_dssp SEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTTBCTTTCBBCCGGGTTTCCTTCCHHHHHHHHHHH
T ss_pred cEEEEEEECCCCCCCCCCEEEEEEECCCcCCCCCCccccccCcccCCCcCCCCeeeCcccccCCCCCCCHHHHHHHHHHH
Confidence 5899999999999999999999999999999999999999999999999 599999999999999999999999999999
Q ss_pred hcCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhcc
Q psy15855 80 LSDPNPNSPANSMAAQLYKENRREYEKRVKACVEQSFI 117 (118)
Q Consensus 80 l~~p~~~~p~n~~a~~~~~~~~~~f~~~v~~~~~~s~~ 117 (118)
|.+|++++|+|.+||++|++|+++|.++||++++++..
T Consensus 118 l~~p~p~~p~n~~aa~~~~~~~~~f~~~a~~~~~~~a~ 155 (201)
T 3k9o_A 118 LAAAEPDDPQDAVVANQYKQNPEMFKQTARLWAHVYAG 155 (201)
T ss_dssp HHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHHC
T ss_pred hcCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhcc
Confidence 99999999999999999999999999999999998864
No 24
>2onu_A Ubiquitin-conjugating enzyme, putative; UBC, plasmodium FAL structural genomics consortium, SGC, ligase; HET: PG4; 2.38A {Plasmodium falciparum}
Probab=100.00 E-value=3.9e-45 Score=248.37 Aligned_cols=117 Identities=34% Similarity=0.731 Sum_probs=113.3
Q ss_pred CEEEEEEeCCCCCCCCCcEEEEEEEeCCCCCCCCCeeEEecccccceee-CCCcEEecCCCCCCCCCCCHHHHHHH-HHH
Q psy15855 1 MIWNAVIFGPHDTPFEDGTFKLTVEFTEEYPNKPPTVRFASKMFHPNVY-ADGGICLDILQNRWSPTYDVSAILTS-IQS 78 (118)
Q Consensus 1 ~~W~~~i~gp~~t~y~gg~f~~~i~fp~~yP~~pP~v~f~t~i~HPnv~-~~g~icl~~l~~~W~p~~~i~~vl~~-i~~ 78 (118)
++|+++|.||+||+|+||+|+++|.||++||++||+|+|.|++|||||+ .+|.||+++|.++|+|++++.+||.+ |++
T Consensus 29 ~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPni~~~~G~iCl~il~~~W~p~~~i~~vl~~ii~~ 108 (152)
T 2onu_A 29 QDFDVMFHGPNGTAYEGGIWKVHVTLPDDYPFASPSIGFMNKLLHPNVDEASGSVCLDVINQTWTPLYSLVNVFEVFLPQ 108 (152)
T ss_dssp EEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTTBCTTTCBBCHHHHHHHCCTTCCHHHHHHTHHHH
T ss_pred ceEEEEEECCCCCcccceEEEEEEcCcccCCCCCCeEEEecCCccCcCcCcCCeEecccccccCCCCCCHHHHHHHHHHH
Confidence 4799999999999999999999999999999999999999999999999 59999999999999999999999999 689
Q ss_pred hhcCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhcc
Q psy15855 79 LLSDPNPNSPANSMAAQLYKENRREYEKRVKACVEQSFI 117 (118)
Q Consensus 79 ll~~p~~~~p~n~~a~~~~~~~~~~f~~~v~~~~~~s~~ 117 (118)
||.+|++++|+|.+||++|++|+++|+++||++++++..
T Consensus 109 Ll~~Pn~~~P~n~~aa~~~~~d~~~y~~~v~~~~~~~a~ 147 (152)
T 2onu_A 109 LLTYPNPSDPLNSDAASLLMKDKNIYEEKVKEYVKLYAS 147 (152)
T ss_dssp HHHSCCCSSCSSHHHHHHHHHCHHHHHHHHHHHHHHHSC
T ss_pred HHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhcc
Confidence 999999999999999999999999999999999999875
No 25
>2y9m_A Ubiquitin-conjugating enzyme E2-21 kDa; ligase-transport protein complex, ubiquitin conjugating ENZY complex, peroxisomal protein; 2.60A {Saccharomyces cerevisiae} PDB: 2y9p_A 2y9o_A
Probab=100.00 E-value=2.3e-44 Score=248.90 Aligned_cols=117 Identities=32% Similarity=0.659 Sum_probs=113.8
Q ss_pred CEEEEEEeCCCCCCCCCcEEEEEEEeCCCCCCCCCeeEEec-ccccceee-CCCcEEecCCC-CCCCCCCCHHHHHHHHH
Q psy15855 1 MIWNAVIFGPHDTPFEDGTFKLTVEFTEEYPNKPPTVRFAS-KMFHPNVY-ADGGICLDILQ-NRWSPTYDVSAILTSIQ 77 (118)
Q Consensus 1 ~~W~~~i~gp~~t~y~gg~f~~~i~fp~~yP~~pP~v~f~t-~i~HPnv~-~~g~icl~~l~-~~W~p~~~i~~vl~~i~ 77 (118)
++|+++|.||+||||+||+|+++|.||++||++||+|+|.| +||||||+ .+|.||+++|. ++|+|+++|.+||.+|+
T Consensus 48 ~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~~i~HPni~~~~G~iCl~iL~~~~W~p~~~i~~vL~si~ 127 (172)
T 2y9m_A 48 SKWEAIISGPSDTPYENHQFRILIEVPSSYPMNPPKISFMQNNILHCNVKSATGEICLNILKPEEWTPVWDLLHCVHAVW 127 (172)
T ss_dssp TEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECTTSCCCTTEETTTTEECCGGGSTTTCCTTCCHHHHHHHHH
T ss_pred hEEEEEEECCCCCcccCCEEEEEEECCCcCCCCCCEEEEeeCCeecCCCcCCCCEEeccccCCCCCCCcCcHHHHHHHHH
Confidence 58999999999999999999999999999999999999999 99999996 89999999998 89999999999999999
Q ss_pred HhhcCCCCCCcccHHHHHHHHH-CHHHHHHHHHHHHHHhcc
Q psy15855 78 SLLSDPNPNSPANSMAAQLYKE-NRREYEKRVKACVEQSFI 117 (118)
Q Consensus 78 ~ll~~p~~~~p~n~~a~~~~~~-~~~~f~~~v~~~~~~s~~ 117 (118)
++|.+|++++|+|.+||++|++ |+++|+++||++++++.+
T Consensus 128 ~ll~~p~~~~p~n~~aa~~~~~~d~~~f~~~~~~~~~~~~~ 168 (172)
T 2y9m_A 128 RLLREPVCDSPLDVDIGNIIRCGDMSAYQGIVKYFLAERER 168 (172)
T ss_dssp HHHHSCCTTSCSSHHHHHHHTTTCHHHHHHHHHHHHHHHHC
T ss_pred HHHhCCCCCCccCHHHHHHHHhCCHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999 999999999999999864
No 26
>1y8x_A Ubiquitin-conjugating enzyme E2 M; ubiquitin-conjugating enzyme E2 M, ligase; 2.40A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=1.5e-44 Score=247.32 Aligned_cols=115 Identities=30% Similarity=0.734 Sum_probs=112.1
Q ss_pred CEEEEEEeCCCCCCCCCcEEEEEEEeCCCCCCCCCeeEEecccccceeeCCCcEEecCCCCCCCCCCCHHHHHHHHHHhh
Q psy15855 1 MIWNAVIFGPHDTPFEDGTFKLTVEFTEEYPNKPPTVRFASKMFHPNVYADGGICLDILQNRWSPTYDVSAILTSIQSLL 80 (118)
Q Consensus 1 ~~W~~~i~gp~~t~y~gg~f~~~i~fp~~yP~~pP~v~f~t~i~HPnv~~~g~icl~~l~~~W~p~~~i~~vl~~i~~ll 80 (118)
++|+++| ||+||+|+||+|+++|.||++||++||+|+|.|++|||||+.+|.||+++|.++|+|+++|.+||.+|+++|
T Consensus 35 ~~w~~~i-gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~G~iCl~iL~~~W~p~~~i~~vL~~i~~ll 113 (160)
T 1y8x_A 35 LNFKLVI-CPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCETMVYHPNIDLEGNVCLNILREDWKPVLTINSIIYGLQYLF 113 (160)
T ss_dssp TEEEEEE-CCSSSTTTTBCEEEEEECCTTTTTSCCEEEECSCCCBTTBCTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHH
T ss_pred ceEEEEE-CCCCCCCCCCEEEEEEeCCCcCCCCCCEEEEecCCccCcCCCCCeEEcccchhhccCCCCHHHHHHHHHHHH
Confidence 5899988 999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhc
Q psy15855 81 SDPNPNSPANSMAAQLYKENRREYEKRVKACVEQSF 116 (118)
Q Consensus 81 ~~p~~~~p~n~~a~~~~~~~~~~f~~~v~~~~~~s~ 116 (118)
.+|++++|+|.+||.+|++|+++|+++||++++.+.
T Consensus 114 ~~Pn~~~p~n~~aa~~~~~~~~~f~~~v~~~v~~~~ 149 (160)
T 1y8x_A 114 LEPNPEDPLNKEAAEVLQNNRRLFEQNVQRSMRGGY 149 (160)
T ss_dssp HSCCCSSCSCHHHHHHHHSCHHHHHHHHHHHHHSEE
T ss_pred hCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHhhCc
Confidence 999999999999999999999999999999998764
No 27
>2pwq_A Ubiquitin conjugating enzyme; structural genomics consortium, SGC, ligase; 1.90A {Plasmodium yoelii}
Probab=100.00 E-value=8.9e-45 Score=258.49 Aligned_cols=117 Identities=39% Similarity=0.836 Sum_probs=114.0
Q ss_pred CEEEEEEeCCCCCCCCCcEEEEEEEeCCCCCCCCCeeEEecccccceee-CCCcEEecCCCCCCCCCCCHHHHHHHHHHh
Q psy15855 1 MIWNAVIFGPHDTPFEDGTFKLTVEFTEEYPNKPPTVRFASKMFHPNVY-ADGGICLDILQNRWSPTYDVSAILTSIQSL 79 (118)
Q Consensus 1 ~~W~~~i~gp~~t~y~gg~f~~~i~fp~~yP~~pP~v~f~t~i~HPnv~-~~g~icl~~l~~~W~p~~~i~~vl~~i~~l 79 (118)
++|+++|.||+||||+||+|+++|.||++||++||+|+|.|+||||||+ .+|.||+++|.++|+|+++|.+||.+|++|
T Consensus 53 ~~W~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~V~F~T~i~HPNI~~~~G~ICL~iL~~~WsP~~ti~~VL~sI~sL 132 (216)
T 2pwq_A 53 FEWVGFIKGPEGTPYEGGHFTLAITIPNDYPYNPPKIKFVTKIWHPNISSQTGAICLDVLKNEWSPALTIRTALLSIQAL 132 (216)
T ss_dssp TEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBCTTTCBBCCHHHHHHCCTTCCHHHHHHHHHHH
T ss_pred ceeEEEEeCCCCCCccceEEEEEEECCCcCCCCCCcccccCCCcCCCCcCCCCEEEchhhcccCCCCCcHHHHHHHHHHH
Confidence 5899999999999999999999999999999999999999999999999 699999999999999999999999999999
Q ss_pred hcCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhcc
Q psy15855 80 LSDPNPNSPANSMAAQLYKENRREYEKRVKACVEQSFI 117 (118)
Q Consensus 80 l~~p~~~~p~n~~a~~~~~~~~~~f~~~v~~~~~~s~~ 117 (118)
|.+|++++|+|.+||++|++|+++|.++||++++++..
T Consensus 133 L~~Pnp~dPln~eaa~~~~~d~~~f~~~ar~~t~~ya~ 170 (216)
T 2pwq_A 133 LSDPQPDDPQDAEVAKMYKENHALFVKTASVWTKTFAT 170 (216)
T ss_dssp HHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHSC
T ss_pred HhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhcC
Confidence 99999999999999999999999999999999998864
No 28
>3rz3_A Ubiquitin-conjugating enzyme E2 R1; ubiquitin conjugating enzyme domain, E2 domain, ligase-ligas inhibitor complex; HET: U94; 2.30A {Homo sapiens} PDB: 2ob4_A
Probab=100.00 E-value=1.1e-44 Score=252.62 Aligned_cols=117 Identities=43% Similarity=0.854 Sum_probs=113.0
Q ss_pred CEEEEEEeCCCCCCCCCcEEEEEEEeCCCCCCCCCeeEEecccccceeeCCCcEEecCCC-------------CCCCCCC
Q psy15855 1 MIWNAVIFGPHDTPFEDGTFKLTVEFTEEYPNKPPTVRFASKMFHPNVYADGGICLDILQ-------------NRWSPTY 67 (118)
Q Consensus 1 ~~W~~~i~gp~~t~y~gg~f~~~i~fp~~yP~~pP~v~f~t~i~HPnv~~~g~icl~~l~-------------~~W~p~~ 67 (118)
++|+++|.||+||+|+||+|+++|.||++||++||+|+|.|++|||||+.+|.||+++|. ++|+|++
T Consensus 38 ~~W~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnV~~~G~iClsiL~~~~~~~~~~~~~~~~W~p~~ 117 (183)
T 3rz3_A 38 YNWEVAIFGPPNTYYEGGYFKARLKFPIDYPYSPPAFRFLTKMWHPNIYETGDVCISILHPPVDDPQSGELPSERWNPTQ 117 (183)
T ss_dssp TEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCCTTBCTTSBBCCTTC--------------CCCCTTC
T ss_pred hheeeeeeCCCCCCCCCCeEEEEEECCCCCCCCCCeeEecCCCccCCCCCCCcEehhhcCcccccccccccccCCCCCcC
Confidence 589999999999999999999999999999999999999999999999999999999996 7899999
Q ss_pred CHHHHHHHHHHhhcCCCCCCcccHHHHHHHHH------CHHHHHHHHHHHHHHhcc
Q psy15855 68 DVSAILTSIQSLLSDPNPNSPANSMAAQLYKE------NRREYEKRVKACVEQSFI 117 (118)
Q Consensus 68 ~i~~vl~~i~~ll~~p~~~~p~n~~a~~~~~~------~~~~f~~~v~~~~~~s~~ 117 (118)
+|.+||.+|++||.+|++++|+|.+||.+|++ ++++|+++||+++++|++
T Consensus 118 ~i~~vL~si~~ll~~Pn~~~p~n~~aa~~~~~~~~~~~~~~~y~~~v~~~v~~s~~ 173 (183)
T 3rz3_A 118 NVRTILLSVISLLNEPNTFSPANVDASVMYRKWKESKGKDREYTDIIRKQVLGTKV 173 (183)
T ss_dssp CHHHHHHHHHHHHHSCCCSSCSSHHHHHHHHHHHHTTTCCCHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHhCCCCCCcccHHHHHHHHhcccccccHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999998 789999999999999875
No 29
>1wzv_A Ubiquitin-conjugating enzyme E2 L6; ligase; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1wzw_A 2kjh_A
Probab=100.00 E-value=2.2e-44 Score=245.28 Aligned_cols=116 Identities=30% Similarity=0.695 Sum_probs=113.5
Q ss_pred CEEEEEEeCCCCCCCCCcEEEEEEEeCCCCCCCCCeeEEecccccceeeCCCcEEecCC-CCCCCCCCCHHHHHHHHHHh
Q psy15855 1 MIWNAVIFGPHDTPFEDGTFKLTVEFTEEYPNKPPTVRFASKMFHPNVYADGGICLDIL-QNRWSPTYDVSAILTSIQSL 79 (118)
Q Consensus 1 ~~W~~~i~gp~~t~y~gg~f~~~i~fp~~yP~~pP~v~f~t~i~HPnv~~~g~icl~~l-~~~W~p~~~i~~vl~~i~~l 79 (118)
++|+++|. |+||+|+||+|+++|.||++||++||+|+|.|++|||||+.+|.||+++| .++|+|+++|.+||.+|+++
T Consensus 35 ~~w~~~I~-P~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnV~~~G~iCl~iL~~~~W~p~~~i~~vl~~i~~l 113 (155)
T 1wzv_A 35 LVWHALLL-PDQPPYHLKAFNLRISFPPEYPFKPPMIKFTTKIYHPNVDENGQICLPIISSENWKPCTKTCQVLEALNVL 113 (155)
T ss_dssp TEEEEEEC-CCSTTGGGEEEEEEEECCTTTTSSCCEEEESSCCCBTTBCTTCBCCCGGGCTTTCCTTCCHHHHHHHHHHH
T ss_pred heEEEEEc-CCCCCCCCCEEEEEEECCCCCCCCCCcceeeCCCccCcCCCCCeEeecCCCccCCCCCCcHHHHHHHHHHH
Confidence 58999999 99999999999999999999999999999999999999999999999999 89999999999999999999
Q ss_pred hcCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhcc
Q psy15855 80 LSDPNPNSPANSMAAQLYKENRREYEKRVKACVEQSFI 117 (118)
Q Consensus 80 l~~p~~~~p~n~~a~~~~~~~~~~f~~~v~~~~~~s~~ 117 (118)
|.+|++++|+|.+||++|++|+++|+++||++++++.+
T Consensus 114 l~~p~~~~p~n~~aa~~~~~~~~~y~~~~r~~~~~~a~ 151 (155)
T 1wzv_A 114 VNRPNIREPLRMDLADLLTQNPELFRKNAEEFTLRFGV 151 (155)
T ss_dssp HHSCCSSSCSSHHHHHHHHHCHHHHHHHHHHHHHHHCE
T ss_pred HhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 99999999999999999999999999999999999865
No 30
>2z5d_A Ubiquitin-conjugating enzyme E2 H; UBE2H, SGC, ligase, structural genomics, structural genomics consortium; 2.10A {Homo sapiens}
Probab=100.00 E-value=8.7e-45 Score=252.13 Aligned_cols=117 Identities=34% Similarity=0.777 Sum_probs=114.1
Q ss_pred CEEEEEEeCCCCCCCCCcEEEEEEEeCCCCCCCCCeeEEecccccceeeC-CCcEEecCCCCCCCCCCCHHHHHHH-HHH
Q psy15855 1 MIWNAVIFGPHDTPFEDGTFKLTVEFTEEYPNKPPTVRFASKMFHPNVYA-DGGICLDILQNRWSPTYDVSAILTS-IQS 78 (118)
Q Consensus 1 ~~W~~~i~gp~~t~y~gg~f~~~i~fp~~yP~~pP~v~f~t~i~HPnv~~-~g~icl~~l~~~W~p~~~i~~vl~~-i~~ 78 (118)
++|+++|.||+||||+||+|+++|.||++||++||+|+|.|+||||||+. +|.||+++|.++|+|+++|.+||.+ |++
T Consensus 51 ~~W~~~I~GP~~tpYegG~f~l~i~fp~~YP~~PP~V~F~t~i~HPNV~~~~G~ICL~iL~~~WsP~~ti~~iL~s~I~~ 130 (179)
T 2z5d_A 51 NEFVVKFYGPQGTPYEGGVWKVRVDLPDKYPFKSPSIGFMNKIFHPNIDEASGTVCLDVINQTWTALYDLTNIFESFLPQ 130 (179)
T ss_dssp TEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTTBCTTTCBBCHHHHHHHCCTTCCTTHHHHTHHHH
T ss_pred ceeEEEEECCCCCCccCCEEEEEeeCCCCCCCCCceEEEecCCccCcCCCCCCeEeccccccCCCCCCCHHHHHHHHHHH
Confidence 58999999999999999999999999999999999999999999999998 9999999999999999999999999 999
Q ss_pred hhcCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhcc
Q psy15855 79 LLSDPNPNSPANSMAAQLYKENRREYEKRVKACVEQSFI 117 (118)
Q Consensus 79 ll~~p~~~~p~n~~a~~~~~~~~~~f~~~v~~~~~~s~~ 117 (118)
||.+|++++|+|.+||++|++|+++|+++||++++++..
T Consensus 131 Ll~~Pn~~~p~n~eaa~~~~~d~~~y~~~vr~~~~~~a~ 169 (179)
T 2z5d_A 131 LLAYPNPIDPLNGDAAAMYLHRPEEYKQKIKEYIQKYAT 169 (179)
T ss_dssp HHHSCCCSSCSCHHHHHHHHHCHHHHHHHHHHHHHHHSS
T ss_pred HHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHHcc
Confidence 999999999999999999999999999999999999864
No 31
>1tte_A Ubiquitin-conjugating enzyme E2-24 kDa; UBC1, ubiquitin-dependent degradation, ligase; NMR {Saccharomyces cerevisiae} SCOP: a.5.2.1 d.20.1.1
Probab=100.00 E-value=8.4e-45 Score=258.46 Aligned_cols=117 Identities=38% Similarity=0.746 Sum_probs=114.2
Q ss_pred CEEEEEEeCCCCCCCCCcEEEEEEEeCCCCCCCCCeeEEecccccceeeC-CCcEEecCCCCCCCCCCCHHHHHHHHHHh
Q psy15855 1 MIWNAVIFGPHDTPFEDGTFKLTVEFTEEYPNKPPTVRFASKMFHPNVYA-DGGICLDILQNRWSPTYDVSAILTSIQSL 79 (118)
Q Consensus 1 ~~W~~~i~gp~~t~y~gg~f~~~i~fp~~yP~~pP~v~f~t~i~HPnv~~-~g~icl~~l~~~W~p~~~i~~vl~~i~~l 79 (118)
++|+++|.||+||||+||+|+++|.||++||++||+|+|.|+||||||+. +|.||+++|.+.|+|+++|.+||.+|++|
T Consensus 33 ~~w~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~V~F~T~i~HPNI~~~~G~ICL~iL~~~WsP~~ti~~VL~sI~sL 112 (215)
T 1tte_A 33 HHLKGTFLGPPGTPYEGGKFVVDIEVPMEYPFKPPKMQFDTKVYHPNISSVTGAICLDILRNAWSPVITLKSALISLQAL 112 (215)
T ss_dssp CEEEEECCEEEEETTEEECCEEEEECCSCSSSCCCEEEETTTCCCSSSCSSSSCCCSSTTTCCSCTTCCHHHHHHHHHHH
T ss_pred cccEEEEeCCCCCCcCCCEEEEEEeCCccCCCCCCcccccCCCccCcCcCCCCEEECccCCCCCCCcCcHHHHHHHHHHH
Confidence 38999999999999999999999999999999999999999999999998 99999999999999999999999999999
Q ss_pred hcCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhcc
Q psy15855 80 LSDPNPNSPANSMAAQLYKENRREYEKRVKACVEQSFI 117 (118)
Q Consensus 80 l~~p~~~~p~n~~a~~~~~~~~~~f~~~v~~~~~~s~~ 117 (118)
|.+|++++|+|.+||++|++|+++|.++||++++++..
T Consensus 113 L~~Pnp~~Pln~eaa~~~~~d~~~f~~~ar~~t~~yA~ 150 (215)
T 1tte_A 113 LQSPEPNDPQDAEVAQHYLRDRESFNKTAALWTRLYAS 150 (215)
T ss_dssp HTSCCCSSCSCHHHHHHHHHCHHHHHHHHHHHHHHSSC
T ss_pred HhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHhcc
Confidence 99999999999999999999999999999999998864
No 32
>2nvu_C NEDD8-conjugating enzyme UBC12; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=4.2e-44 Score=249.07 Aligned_cols=115 Identities=30% Similarity=0.702 Sum_probs=112.2
Q ss_pred CEEEEEEeCCCCCCCCCcEEEEEEEeCCCCCCCCCeeEEecccccceeeCCCcEEecCCCCCCCCCCCHHHHHHHHHHhh
Q psy15855 1 MIWNAVIFGPHDTPFEDGTFKLTVEFTEEYPNKPPTVRFASKMFHPNVYADGGICLDILQNRWSPTYDVSAILTSIQSLL 80 (118)
Q Consensus 1 ~~W~~~i~gp~~t~y~gg~f~~~i~fp~~yP~~pP~v~f~t~i~HPnv~~~g~icl~~l~~~W~p~~~i~~vl~~i~~ll 80 (118)
++|+++| ||+||||+||+|+++|.||++||++||+|+|.|++|||||+.+|.||+++|.++|+|+++|.+||.+|+++|
T Consensus 55 ~~W~~~i-gP~~tpYegg~f~~~i~fp~~YP~~PP~v~F~t~i~HPNV~~~G~iCl~iL~~~W~p~~~i~~vL~si~~ll 133 (180)
T 2nvu_C 55 LNFKLVI-CPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCETMVYHPNIDLEGNVALNILREDWKPVLTINSIIYGLQYLF 133 (180)
T ss_dssp TEEEEEE-CCCSGGGTTBCEEEEEECCTTTTTSCCEEEECSCCCBTTBCTTSBBCCGGGTTSCCTTCCHHHHHHHHHHHH
T ss_pred cceEEEE-CCCCCCCCCCEEEEEEeCCCcCCCCCCcCceeccCccCCCCCCCcEEcccccccCCCCCCHHHHHHHHHHHH
Confidence 5899988 999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhc
Q psy15855 81 SDPNPNSPANSMAAQLYKENRREYEKRVKACVEQSF 116 (118)
Q Consensus 81 ~~p~~~~p~n~~a~~~~~~~~~~f~~~v~~~~~~s~ 116 (118)
.+|++++|+|.+||.+|++|+++|+++||++++.+.
T Consensus 134 ~~Pn~~~p~n~~aa~~~~~d~~~f~~~v~~~v~~~~ 169 (180)
T 2nvu_C 134 LEPNPEDPLNKEAAEVLQNNRRLFEQNVQRSMRGGY 169 (180)
T ss_dssp HSCCTTSCSSHHHHHHHHHCHHHHHHHHHHHHHSEE
T ss_pred hCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHhhCC
Confidence 999999999999999999999999999999999764
No 33
>1yrv_A Ubiquitin-conjugating ligase MGC351130; structural genomics consortium, SGC, ubiquitin- conjugating enzyme; 2.18A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=2.4e-44 Score=248.16 Aligned_cols=113 Identities=34% Similarity=0.640 Sum_probs=109.4
Q ss_pred CEEEEEEeCCCCCCCCCcEEEEEEEeCCCCCCCCCeeEEeccccccee-eCCCcEEecCCC--CCCCCCCCHHHHHHHHH
Q psy15855 1 MIWNAVIFGPHDTPFEDGTFKLTVEFTEEYPNKPPTVRFASKMFHPNV-YADGGICLDILQ--NRWSPTYDVSAILTSIQ 77 (118)
Q Consensus 1 ~~W~~~i~gp~~t~y~gg~f~~~i~fp~~yP~~pP~v~f~t~i~HPnv-~~~g~icl~~l~--~~W~p~~~i~~vl~~i~ 77 (118)
++|+++|.||+||||+||+|+++|.||++||++||+|+|.|+|||||| +.+|.||+++|. ++|+|+++|.+||.+|+
T Consensus 53 ~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNI~~~~G~ICL~iL~~~~~WsP~~ti~~vL~sI~ 132 (169)
T 1yrv_A 53 MEWEVEIEGLQNSVWQGLVFQLTIHFTSEYNYAPPVVKFITIPFHPNVDPHTGQPCIDFLDNPEKWNTNYTLSSILLALQ 132 (169)
T ss_dssp CEEEEEEECCTTSTTTTCEEEEEEECCTTBTTBCCEEEESSCCCCTTBCTTTCCBCCHHHHCGGGCCTTCCHHHHHHHHH
T ss_pred ccceeEEECCCCCCccceEEEEEEECCccCCCCCCcceecCCCccCcccCCCCeEeehhhcCCcCCCCcCCHHHHHHHHH
Confidence 589999999999999999999999999999999999999999999999 799999999998 89999999999999999
Q ss_pred HhhcCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHH
Q psy15855 78 SLLSDPNPNSPANSMAAQLYKENRREYEKRVKACVEQ 114 (118)
Q Consensus 78 ~ll~~p~~~~p~n~~a~~~~~~~~~~f~~~v~~~~~~ 114 (118)
++|.+|++++|+|.+||++|++|+++|+++ +++|++
T Consensus 133 sll~~Pn~~~Pln~eaa~l~~~d~~~y~~~-~~~v~~ 168 (169)
T 1yrv_A 133 VMLSNPVLENPVNLEAARILVKDESLYRTI-LRLFNR 168 (169)
T ss_dssp HHHTSCCTTSCSCHHHHHHHHSCHHHHHHH-HHHHC-
T ss_pred HHHhCCCCCCchhHHHHHHHHHCHHHHHHH-HHHhhC
Confidence 999999999999999999999999999999 998875
No 34
>1yf9_A Ubiquitin carrier protein 4; SGPP, structural genomics, PSI, protein structure initiative ubiquitin conjugating enzyme; 2.00A {Leishmania major} SCOP: d.20.1.1
Probab=100.00 E-value=3.3e-44 Score=247.87 Aligned_cols=117 Identities=33% Similarity=0.713 Sum_probs=113.2
Q ss_pred CEEEEEEeCCCCCCCCCcEEEEEEEeCCCCCCCCCeeEEecccccceee-CCCcEEecCCCCCCCCCCCHHHHHHHH-HH
Q psy15855 1 MIWNAVIFGPHDTPFEDGTFKLTVEFTEEYPNKPPTVRFASKMFHPNVY-ADGGICLDILQNRWSPTYDVSAILTSI-QS 78 (118)
Q Consensus 1 ~~W~~~i~gp~~t~y~gg~f~~~i~fp~~yP~~pP~v~f~t~i~HPnv~-~~g~icl~~l~~~W~p~~~i~~vl~~i-~~ 78 (118)
++|+++|.||+||+|+||+|+++|.||++||++||+|+|.|+||||||+ .+|.||+++|.++|+|+++|.+||.+| ++
T Consensus 38 ~~w~~~I~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~F~t~i~HPNi~~~~G~iCl~iL~~~W~p~~~i~~vL~sil~~ 117 (171)
T 1yf9_A 38 AEFWVEFKGPEGTPYEDGTWMLHVQLPSDYPFKSPSIGFCNRILHPNVDERSGSVCLDVINQTWTPMYQLENIFDVFLPQ 117 (171)
T ss_dssp TEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTTBCTTTCBBCHHHHHHHCCTTCCTHHHHHTHHHH
T ss_pred eEEEEEEECCCCCCccCceEEEEEEcCCCCCCCCCeEEeecCcccccCcccCCeEeccccccCCCCCCcHHHHHHHHHHH
Confidence 5899999999999999999999999999999999999999999999999 599999999999999999999999997 79
Q ss_pred hhcCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhcc
Q psy15855 79 LLSDPNPNSPANSMAAQLYKENRREYEKRVKACVEQSFI 117 (118)
Q Consensus 79 ll~~p~~~~p~n~~a~~~~~~~~~~f~~~v~~~~~~s~~ 117 (118)
||.+|++++|+|.+||.+|++|+++|.++||++++++..
T Consensus 118 ll~~Pn~~~p~n~~aa~~~~~d~~~y~~~vr~~~~~~a~ 156 (171)
T 1yf9_A 118 LLRYPNPSDPLNVQAAHLLHADRVGFDALLREHVSTHAT 156 (171)
T ss_dssp HHHSCCSSCCSCHHHHHHHHHCHHHHHHHHHHHHHHHCC
T ss_pred HHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHHcC
Confidence 999999999999999999999999999999999998764
No 35
>3fn1_B NEDD8-conjugating enzyme UBE2F; ligase, ATP-binding, cell cycle, nucleotide-binding, UBL CON pathway; 2.50A {Homo sapiens} PDB: 2edi_A
Probab=100.00 E-value=1.4e-43 Score=243.93 Aligned_cols=116 Identities=25% Similarity=0.567 Sum_probs=111.7
Q ss_pred CEEEEEEeCCCCCCCCCcEEEEEEEeCCCCCCCCCeeEEecccccceeeCCCcEEecCCCC------CCCCCCCHHHHHH
Q psy15855 1 MIWNAVIFGPHDTPFEDGTFKLTVEFTEEYPNKPPTVRFASKMFHPNVYADGGICLDILQN------RWSPTYDVSAILT 74 (118)
Q Consensus 1 ~~W~~~i~gp~~t~y~gg~f~~~i~fp~~yP~~pP~v~f~t~i~HPnv~~~g~icl~~l~~------~W~p~~~i~~vl~ 74 (118)
+.|+++| ||+||||+||+|+++|.||++||++||+|+|.|++|||||+.+|.||+++|.. +|+|+++|.+||.
T Consensus 45 ~~w~~~i-gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~~G~iCl~iL~~~~~~~~~W~p~~~i~~vl~ 123 (167)
T 3fn1_B 45 HCFQLTV-TPDEGYYQGGKFQFETEVPDAYNMVPPKVKCLTKIWHPNITETGEICLSLLREHSIDGTGWAPTRTLKDVVW 123 (167)
T ss_dssp TEEEEEE-CCSSSTTTTCCEEEEEECCTTBTTBCCEEEECSCCCCSSBCTTCCBCCGGGSBCSSSTTSBCTTCCHHHHHH
T ss_pred eeEEEEE-CCCCCccCCCEEEEEEECCCCCCCCCCeeEecCCcccCCCCCCCEEechhhccCCCCCCCCCCcCcHHHHHH
Confidence 4799988 89999999999999999999999999999999999999999999999999975 7999999999999
Q ss_pred HHHHhhcC-CCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhcc
Q psy15855 75 SIQSLLSD-PNPNSPANSMAAQLYKENRREYEKRVKACVEQSFI 117 (118)
Q Consensus 75 ~i~~ll~~-p~~~~p~n~~a~~~~~~~~~~f~~~v~~~~~~s~~ 117 (118)
+|+++|.+ |++++|+|.+||++|++|+++|+++||++++++++
T Consensus 124 ~i~~ll~~~pn~~~p~n~eaa~~~~~~~~~f~~~~r~~~~~~A~ 167 (167)
T 3fn1_B 124 GLNSLFTDLLNFDDPLNIEAAEHHLRDKEDFRNKVDDYIKRYAR 167 (167)
T ss_dssp HHHHTTTTTCCSSSCSCHHHHHHHHHCHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHcCCCCCCcchhHHHHHHHHHCHHHHHHHHHHHHHHhcC
Confidence 99999999 69999999999999999999999999999999864
No 36
>2awf_A Ubiquitin-conjugating enzyme E2 G1; ligase, UBL conjugation pathway, structural genomics, structural genomics consortium SGC; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1pzv_A
Probab=100.00 E-value=2.6e-44 Score=248.58 Aligned_cols=111 Identities=41% Similarity=0.909 Sum_probs=81.0
Q ss_pred CEEEEEEeCCCCCCCCCcEEEEEEEeCCCCCCCCCeeEEecccccceeeCCCcEEecCCC-------------CCCCCCC
Q psy15855 1 MIWNAVIFGPHDTPFEDGTFKLTVEFTEEYPNKPPTVRFASKMFHPNVYADGGICLDILQ-------------NRWSPTY 67 (118)
Q Consensus 1 ~~W~~~i~gp~~t~y~gg~f~~~i~fp~~yP~~pP~v~f~t~i~HPnv~~~g~icl~~l~-------------~~W~p~~ 67 (118)
++|+++|.||+||+|+||+|+++|.||++||++||+|+|.|++|||||+.+|.||+++|. +.|+|++
T Consensus 48 ~~W~~~I~GP~~TpYegG~f~~~i~fp~~YP~~PP~v~F~T~i~HPNV~~~G~IClsiL~~~~~d~~~~~~~~~~WsP~~ 127 (172)
T 2awf_A 48 YRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEIWHPNVDKNGDVCISILHEPGEDKYGYEKPEERWLPIH 127 (172)
T ss_dssp TEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCCTTBCTTCBBCCGGGSCC---------CTTSCCTTC
T ss_pred cccEEEEeCCCCCCcCCcEEEEEEECCcccCCCCCcccccCCCccCCCCCCCcEehhhcCCcccccccccccCCCCCCcC
Confidence 589999999999999999999999999999999999999999999999999999999996 6899999
Q ss_pred CHHHHHHHHHHhhcCCCCCCcccHHHHHHHHHCHH-HHHHHHHHH
Q psy15855 68 DVSAILTSIQSLLSDPNPNSPANSMAAQLYKENRR-EYEKRVKAC 111 (118)
Q Consensus 68 ~i~~vl~~i~~ll~~p~~~~p~n~~a~~~~~~~~~-~f~~~v~~~ 111 (118)
+|.+||.+|++||.+|++++|+|.+||++|++|++ +|+++||+|
T Consensus 128 ti~~vL~sI~sll~~Pn~~~p~n~~aa~~~~~d~~~~f~~~vr~~ 172 (172)
T 2awf_A 128 TVETIMISVISMLADPNGDSPANVDAAKEWREDRNGEFKRKVARC 172 (172)
T ss_dssp CHHHHHHHHHHHHSCC-----------------------------
T ss_pred cHHHHHHHHHHHHHCcCCCCccCHHHHHHHHHCcHHHHHHHHHhC
Confidence 99999999999999999999999999999999999 999999986
No 37
>3e46_A Ubiquitin-conjugating enzyme E2-25 kDa; huntington interacting, ligase, alternative splicing, cytoplasm, UBL conjugation, UBL conjugation pathway; 1.86A {Homo sapiens} SCOP: a.5.2.1 d.20.1.1 PDB: 3f92_A*
Probab=100.00 E-value=2e-43 Score=256.42 Aligned_cols=117 Identities=34% Similarity=0.727 Sum_probs=114.1
Q ss_pred CEEEEEEeCCCCCCCCCcEEEEEEEeCCCCCCCCCeeEEecccccceee-CCCcEEecCCCCCCCCCCCHHHHHHHHHHh
Q psy15855 1 MIWNAVIFGPHDTPFEDGTFKLTVEFTEEYPNKPPTVRFASKMFHPNVY-ADGGICLDILQNRWSPTYDVSAILTSIQSL 79 (118)
Q Consensus 1 ~~W~~~i~gp~~t~y~gg~f~~~i~fp~~yP~~pP~v~f~t~i~HPnv~-~~g~icl~~l~~~W~p~~~i~~vl~~i~~l 79 (118)
++|+++|.||+||||+||+|+++|.||++||++||+|+|.|+||||||+ .+|.||+++|.++|+|+++|.+||.+|+++
T Consensus 90 ~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNV~~~~G~ICL~iL~~~WsP~~ti~~vL~sI~~l 169 (253)
T 3e46_A 90 TELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHPNISSVTGAICLDILKDQWAAAMTLRTVLLSLQAL 169 (253)
T ss_dssp SEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBCTTTCBBCCGGGTTCCCTTCCHHHHHHHHHHH
T ss_pred cEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCCeeeecCCCccCCccCCCCeeecccccCCCCCCCCHHHHHHHHHHH
Confidence 5899999999999999999999999999999999999999999999999 599999999999999999999999999999
Q ss_pred hcCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhcc
Q psy15855 80 LSDPNPNSPANSMAAQLYKENRREYEKRVKACVEQSFI 117 (118)
Q Consensus 80 l~~p~~~~p~n~~a~~~~~~~~~~f~~~v~~~~~~s~~ 117 (118)
|.+|++++|+|.+||++|++|+++|.++||++++++..
T Consensus 170 l~~pnp~~Pln~eaa~l~~~d~~~f~~~ar~~t~~yA~ 207 (253)
T 3e46_A 170 LAAAEPDDPQDAVVANQYKQNPEMFKQTARLWAHVYAG 207 (253)
T ss_dssp HHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHHC
T ss_pred hcCCCCCChhhHHHHHHHHHCHHHHHHHHHHHHHHhcc
Confidence 99999999999999999999999999999999998864
No 38
>1c4z_D UBCH7, ubiquitin conjugating enzyme E2; bilobal structure, elongated shape, E3 ubiquitin ligase, E2 ubiquitin conjugating enzyme; 2.60A {Homo sapiens} SCOP: d.20.1.1 PDB: 1fbv_C* 3sy2_C 3sqv_C
Probab=100.00 E-value=7.7e-44 Score=242.38 Aligned_cols=116 Identities=28% Similarity=0.773 Sum_probs=111.4
Q ss_pred CEEEEEEeCCCCCCCCCcEEEEEEEeCCCCCCCCCeeEEecccccceeeCCCcEEecCCC-CCCCCCCCHHHHHHHHHHh
Q psy15855 1 MIWNAVIFGPHDTPFEDGTFKLTVEFTEEYPNKPPTVRFASKMFHPNVYADGGICLDILQ-NRWSPTYDVSAILTSIQSL 79 (118)
Q Consensus 1 ~~W~~~i~gp~~t~y~gg~f~~~i~fp~~yP~~pP~v~f~t~i~HPnv~~~g~icl~~l~-~~W~p~~~i~~vl~~i~~l 79 (118)
++|+++|. |+||+|+||+|+++|.||++||++||+|+|.|++|||||+.+|.||+++|. ++|+|++++.+||.+|+++
T Consensus 33 ~~w~~~i~-P~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~G~iCl~iL~~~~W~p~~~i~~vl~~i~~l 111 (154)
T 1c4z_D 33 LTWQGLIV-PDNPPYDKGAFRIEINFPAEYPFKPPKITFKTKIYHPNIDEKGQVCLPVISAENWKPATKTDQVIQSLIAL 111 (154)
T ss_dssp SEEEEEEC-CCSSSCCSCCEEEEEECCTTTTTSCCEEEESSCCCCTTBCTTCBBCCTTTSSSSCCTTCCHHHHHHHHHHH
T ss_pred heEEEEEe-CCCCCccCCeEEEEEEeCCCCCCCCCEEEEeCCCccccCCCCCEEECCCCCCCCCCCCCcHHHHHHHHHHH
Confidence 58999998 999999999999999999999999999999999999999999999999996 7999999999999999999
Q ss_pred hcCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhcc
Q psy15855 80 LSDPNPNSPANSMAAQLYKENRREYEKRVKACVEQSFI 117 (118)
Q Consensus 80 l~~p~~~~p~n~~a~~~~~~~~~~f~~~v~~~~~~s~~ 117 (118)
|.+|++++|+|.+||++|++|+++|+++||++++++..
T Consensus 112 l~~p~~~~p~n~~aa~~~~~~~~~f~~~~~~~~~~~a~ 149 (154)
T 1c4z_D 112 VNDPQPEHPLRADLAEEYSKDRKKFCKNAEEFTKKYGE 149 (154)
T ss_dssp HHSCCCSSCSCHHHHHHHHTCSSTTHHHHHHHHTTC--
T ss_pred HcCCCCCchhhHHHHHHHHHhHHHHHHHHHHHHHHhcc
Confidence 99999999999999999999999999999999998764
No 39
>3o2u_A NEDD8-conjugating enzyme UBC12; E2 conjugase, ligase; 2.00A {Saccharomyces cerevisiae} PDB: 3tdi_C
Probab=100.00 E-value=7.7e-43 Score=244.52 Aligned_cols=114 Identities=33% Similarity=0.695 Sum_probs=111.1
Q ss_pred EEEEEEeCCCCCCCCCcEEEEEEEeCCCCCCCCCeeEEecccccceeeCCCcEEecCCCCCCCCCCCHHHHHHHHHHhhc
Q psy15855 2 IWNAVIFGPHDTPFEDGTFKLTVEFTEEYPNKPPTVRFASKMFHPNVYADGGICLDILQNRWSPTYDVSAILTSIQSLLS 81 (118)
Q Consensus 2 ~W~~~i~gp~~t~y~gg~f~~~i~fp~~yP~~pP~v~f~t~i~HPnv~~~g~icl~~l~~~W~p~~~i~~vl~~i~~ll~ 81 (118)
+|+++|. |++|||+||+|+++|.||++||++||+|+|.|++|||||+.+|.||+++|.++|+|+++|.+||.+|+++|.
T Consensus 65 ~w~~~I~-p~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnV~~~G~iCl~iL~~~W~p~~~i~~vL~~i~~ll~ 143 (190)
T 3o2u_A 65 KLEVIVR-PDEGYYNYGSINFNLDFNEVYPIEPPKVVCLKKIFHPNIDLKGNVCLNILREDWSPALDLQSIITGLLFLFL 143 (190)
T ss_dssp EEEEEEC-CSSSTTTTCCEEEEEECCTTTTTSCCEEEECSCCCCTTBCTTSBBCCGGGTTTCCTTCCHHHHHHHHHHHHH
T ss_pred eEEEEEc-CCCCCCCCCEEEEEEECCCCCCCCCceeEEecCcccCCCCCCCeEechhccCCCCCCCCHHHHHHHHHHHHh
Confidence 8999997 888999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhc
Q psy15855 82 DPNPNSPANSMAAQLYKENRREYEKRVKACVEQSF 116 (118)
Q Consensus 82 ~p~~~~p~n~~a~~~~~~~~~~f~~~v~~~~~~s~ 116 (118)
+|++++|+|.+||++|++|+++|+++||++++.+.
T Consensus 144 ~pn~~~pln~~aa~~~~~d~~~f~~~ar~~~~~~~ 178 (190)
T 3o2u_A 144 EPNPNDPLNKDAAKLLCEGEKEFAEAVRLTMSGGS 178 (190)
T ss_dssp SCCTTSCSSHHHHHHHHTCHHHHHHHHHHHHBTCE
T ss_pred CCCCCcchhHHHHHHHHHCHHHHHHHHHHHHHhcC
Confidence 99999999999999999999999999999998765
No 40
>4ddg_A Ubiquitin-conjugating enzyme E2 D2, ubiquitin THI OTUB1; inhibition, hydrolase-ligase complex; 3.30A {Homo sapiens} PDB: 4ddi_A
Probab=100.00 E-value=2.1e-41 Score=259.58 Aligned_cols=117 Identities=41% Similarity=0.887 Sum_probs=114.6
Q ss_pred CEEEEEEeCCCCCCCCCcEEEEEEEeCCCCCCCCCeeEEecccccceeeCCCcEEecCCCCCCCCCCCHHHHHHHHHHhh
Q psy15855 1 MIWNAVIFGPHDTPFEDGTFKLTVEFTEEYPNKPPTVRFASKMFHPNVYADGGICLDILQNRWSPTYDVSAILTSIQSLL 80 (118)
Q Consensus 1 ~~W~~~i~gp~~t~y~gg~f~~~i~fp~~yP~~pP~v~f~t~i~HPnv~~~g~icl~~l~~~W~p~~~i~~vl~~i~~ll 80 (118)
++|+++|.||+||||+||+|+++|.||++||++||+|+|.|++|||||+.+|.||+++|.++|+|++++.+||.+|+++|
T Consensus 33 ~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~~G~iCl~il~~~W~p~~~i~~vL~~i~~ll 112 (399)
T 4ddg_A 33 FHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSISLDILRSQWSPALTISKVLLSICSLL 112 (399)
T ss_dssp EEEEEEEECCTTSSSTTCEEEEEEECCSSTTTSCCEEEESSCCCCTTBCTTCBBCCGGGTTSCCTTCCHHHHHHHHHHHH
T ss_pred eEEEEEEECCCCCCCCCCEEEEEEECCcccCCCCcEEEeeccccccccCCCCeEeCcccccCCCccccHHHHHHHHHHHH
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhcc
Q psy15855 81 SDPNPNSPANSMAAQLYKENRREYEKRVKACVEQSFI 117 (118)
Q Consensus 81 ~~p~~~~p~n~~a~~~~~~~~~~f~~~v~~~~~~s~~ 117 (118)
.+|++++|+|.+||++|++|+++|.++||++++++..
T Consensus 113 ~~pnp~~p~n~~aa~~~~~d~~~y~~~~~~~~~~~a~ 149 (399)
T 4ddg_A 113 CDPNPDDPLVPEIARIYKTDREKYNRIAREWTQKYAM 149 (399)
T ss_dssp HSCCTTSCSSHHHHHHHHHCHHHHHHHHHHHHHHHTS
T ss_pred cCCCCCchhhHHHHHHHHHCHHHHHHHHHHHHHHhhc
Confidence 9999999999999999999999999999999999864
No 41
>4ds2_A Ubiquitin-conjugating enzyme E2, putative; structural genomics, PSI, protein structure initiative; 2.63A {Trypanosoma cruzi}
Probab=100.00 E-value=1.7e-40 Score=228.58 Aligned_cols=110 Identities=26% Similarity=0.635 Sum_probs=104.0
Q ss_pred CEEEEEEeCCCCCCCC--CcEEEEEEEeCCCCCCCCCeeEEecccccceeeCCCcEEecCCCCCCCCCCCHHHHH-HHHH
Q psy15855 1 MIWNAVIFGPHDTPFE--DGTFKLTVEFTEEYPNKPPTVRFASKMFHPNVYADGGICLDILQNRWSPTYDVSAIL-TSIQ 77 (118)
Q Consensus 1 ~~W~~~i~gp~~t~y~--gg~f~~~i~fp~~yP~~pP~v~f~t~i~HPnv~~~g~icl~~l~~~W~p~~~i~~vl-~~i~ 77 (118)
++|+++|.||+||+|+ ||.|+++|.||++||++||+|+|.|++|||||+.+|.||+++|.++|+|++++.++| ..|+
T Consensus 50 ~~w~~~i~Gp~~tpye~~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~~G~iCl~il~~~W~p~~~i~~vll~~l~ 129 (167)
T 4ds2_A 50 YNWILKVKAPADSVYGGAGNTYQLSVLFSDDYPHEPPTVRFVTPVYSPLVTGEGGICDRMVNDFWTPDQHASDVIKLVLD 129 (167)
T ss_dssp TEEEEEEECCTTSGGGTTCCEEEEEEECCTTTTTSCCEEEESSCCCCSSCCTTSCCCTHHHHTTCCTTSCHHHHHHHHHH
T ss_pred cEEEEEEECCCCCCccCCCCEEEEEEECCCCCCCCCCEEEEeCCcccccCCCCCEEEcccCcCCCCCCCChHHHHHHHHH
Confidence 5899999999999999 999999999999999999999999999999999999999999999999999999975 5677
Q ss_pred HhhcC--CCCCCcccHHHHHHHHHCHHHHHHHHHH
Q psy15855 78 SLLSD--PNPNSPANSMAAQLYKENRREYEKRVKA 110 (118)
Q Consensus 78 ~ll~~--p~~~~p~n~~a~~~~~~~~~~f~~~v~~ 110 (118)
+|+.+ |++++|+|.+||++|++|+++|+++||+
T Consensus 130 ~l~~~~~pn~~~p~n~eaa~l~~~d~~~f~~~vrr 164 (167)
T 4ds2_A 130 RVFSQYKSRRDDDVNPEARHYLEKFPQDFAARVRR 164 (167)
T ss_dssp HHHTSTTSCCSCCCCHHHHHHHHHCHHHHHHHHTT
T ss_pred HHHhcCCCCCcchHhHHHHHHHHHCHHHHHHHHhh
Confidence 88874 8999999999999999999999999984
No 42
>2q0v_A Ubiquitin-conjugating enzyme E2, putative; malaria, structural G structural genomics consortium, SGC, ligase; 2.40A {Plasmodium falciparum} PDB: 3e95_C
Probab=100.00 E-value=1.8e-39 Score=221.14 Aligned_cols=99 Identities=29% Similarity=0.582 Sum_probs=93.3
Q ss_pred CEEEEEEeCCCCCCCCCcEEEEEEEeCCCCCCCCCeeEEecccccceeeCCCcE---EecCCCCCCCCCCCHHHHHHHHH
Q psy15855 1 MIWNAVIFGPHDTPFEDGTFKLTVEFTEEYPNKPPTVRFASKMFHPNVYADGGI---CLDILQNRWSPTYDVSAILTSIQ 77 (118)
Q Consensus 1 ~~W~~~i~gp~~t~y~gg~f~~~i~fp~~yP~~pP~v~f~t~i~HPnv~~~g~i---cl~~l~~~W~p~~~i~~vl~~i~ 77 (118)
++|+++|.||+||+|+||+|+++|.||++||++||+|+|.|+||||||+.+|+| |+++|. +|+|+++|++||.+|+
T Consensus 55 ~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~t~i~HPNV~~~G~icisCL~iL~-~WsP~~ti~~vL~sI~ 133 (156)
T 2q0v_A 55 SNWSCTIFGQPGTVFENRIYSLTIFCDDNYPDSPPTVKFDTKIEMSCVDNCGRVIKNNLHILK-NWNRNYTIETILISLR 133 (156)
T ss_dssp CEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESBCCCCTTBCTTSBBCGGGSHHHH-TCCTTCCHHHHHHHHH
T ss_pred eeeEEEEECCCCCCcCCcEEEEEEECCCcCCCCCCeEEEEcccccCCCccCCeEehhhccccc-CCCCcCcHHHHHHHHH
Confidence 489999999999999999999999999999999999999999999999999999 888886 5999999999999999
Q ss_pred HhhcCCCCCCcccHHHHHHHHHC
Q psy15855 78 SLLSDPNPNSPANSMAAQLYKEN 100 (118)
Q Consensus 78 ~ll~~p~~~~p~n~~a~~~~~~~ 100 (118)
++|.+|++++|+|.+||.+|++|
T Consensus 134 ~ll~~Pn~~~p~n~~aa~~y~~n 156 (156)
T 2q0v_A 134 QEMLSSANKRLPQPNEGEVYSNN 156 (156)
T ss_dssp HHTTSTTTTTCCCCCTTCBC---
T ss_pred HHHhCCCCCCcCChHHHHHhhhC
Confidence 99999999999999999999865
No 43
>3ceg_A Baculoviral IAP repeat-containing protein 6; apoptosis, ligase, protease inhibitor, thiol protease inhibitor, UBL conjugation pathway; HET: MSE; 2.01A {Homo sapiens}
Probab=100.00 E-value=6.8e-38 Score=233.43 Aligned_cols=116 Identities=34% Similarity=0.708 Sum_probs=109.3
Q ss_pred CEEEEEEeCCCCCCCCCcEEEEEEEeCCCCCCCCCeeEEecc-----cccceeeCCCcEEecCCC-------CCCCCCC-
Q psy15855 1 MIWNAVIFGPHDTPFEDGTFKLTVEFTEEYPNKPPTVRFASK-----MFHPNVYADGGICLDILQ-------NRWSPTY- 67 (118)
Q Consensus 1 ~~W~~~i~gp~~t~y~gg~f~~~i~fp~~yP~~pP~v~f~t~-----i~HPnv~~~g~icl~~l~-------~~W~p~~- 67 (118)
+.|+++|.||+||||+||+|+|+|.||++||++||+|+|.|+ +|||||+.+|.||+++|. +.|+|++
T Consensus 110 ~~w~~~I~GP~~TpYegG~F~l~I~fP~dYP~~PP~V~F~T~~g~~~ifHPNV~~~G~ICLsiL~~~~g~~~e~WsPa~s 189 (323)
T 3ceg_A 110 DIMKVLITGPADTPYANGCFEFDVYFPQDYPSSPPLVNLETTGGHSVRFNPNLYNDGKVCLSILNTWHGRPEEKWNPQTS 189 (323)
T ss_dssp TEEEEEEEBCTTSTTBTCEEEEEEECCTTTTTSCCEEEECCSTTTTCCCBTTBCTTCBBCCGGGTSSCCCGGGSCCTTTC
T ss_pred cccEEEEeCCCCCCcCCCEEEEEEeCCCCCCCCCCeEEEeccCCCcccccCCCCcCCeEechhhccccCCCcCCCCcCcC
Confidence 479999999999999999999999999999999999999998 999999999999999997 6899999
Q ss_pred CHHHHHHHHHHhhc--CCCCCCcccHHH--HHHHHHCHHHHHHHHHHHHHHhc
Q psy15855 68 DVSAILTSIQSLLS--DPNPNSPANSMA--AQLYKENRREYEKRVKACVEQSF 116 (118)
Q Consensus 68 ~i~~vl~~i~~ll~--~p~~~~p~n~~a--~~~~~~~~~~f~~~v~~~~~~s~ 116 (118)
+|.+||.+|++||. +|++++|+|.++ +.+|++|+++|+++|++++.++.
T Consensus 190 tI~~VLlsIqsLL~~~~Pn~~dP~~~~a~a~~~~~~d~~~Y~~~vr~~t~k~A 242 (323)
T 3ceg_A 190 SFLQVLVSVQSLILVAEPYFNEPGYERSRGTPSGTQSSREYDGNIRQATVKWA 242 (323)
T ss_dssp CHHHHHHHHHHHTSCSSGGGGSTTGGGGTTSHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHcCCCCCCCCccCHHHHHhhhhhhhHHHHHHHHHHHHHHHh
Confidence 89999999999996 777799999987 67999999999999999998864
No 44
>2a4d_A Ubiquitin-conjugating enzyme E2 variant 1; alternative splicing, nuclear protein, UBL conjugation pathway,ubiquitin, ligase, structural genomics; 1.69A {Homo sapiens} SCOP: d.20.1.1 PDB: 2c2v_C 1j7d_A 1j74_A 1zgu_A
Probab=100.00 E-value=2e-37 Score=211.74 Aligned_cols=94 Identities=26% Similarity=0.572 Sum_probs=90.7
Q ss_pred CEEEEEEeCCCCCCCCCcEEEEEEEeCCCCCCCCCeeEEecccccceee-CCCcEEecCCC--CCCCCCCCHHHHHHHHH
Q psy15855 1 MIWNAVIFGPHDTPFEDGTFKLTVEFTEEYPNKPPTVRFASKMFHPNVY-ADGGICLDILQ--NRWSPTYDVSAILTSIQ 77 (118)
Q Consensus 1 ~~W~~~i~gp~~t~y~gg~f~~~i~fp~~yP~~pP~v~f~t~i~HPnv~-~~g~icl~~l~--~~W~p~~~i~~vl~~i~ 77 (118)
++|+++|.||+||+|+||+|+++|.||++||++||+|+|.|++|||||+ .+|.||+++|. ++|+|+++|++||.+|+
T Consensus 59 ~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~i~HPNV~~~~G~ICl~iL~~~~~WsP~~ti~~vL~sI~ 138 (160)
T 2a4d_A 59 TRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKINMNGVNSSNGVVDPRAISVLAKWQNSYSIKVVLQELR 138 (160)
T ss_dssp CEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESBCCCCTTBCTTTCBBCGGGSHHHHTCCTTCCHHHHHHHHH
T ss_pred eeeEEEEECCCCCCccCeEEEEEEECCCcCCCCCcEEEEecCceeCCEECCCCEEehhhcCCccCCCccCcHHHHHHHHH
Confidence 4899999999999999999999999999999999999999999999999 79999999998 89999999999999999
Q ss_pred Hhhc-CCCCCCcccHHHH
Q psy15855 78 SLLS-DPNPNSPANSMAA 94 (118)
Q Consensus 78 ~ll~-~p~~~~p~n~~a~ 94 (118)
++|. +|++++|+|.|||
T Consensus 139 ~ll~~~pn~~~P~n~eaa 156 (160)
T 2a4d_A 139 RLMMSKENMKLPQPPEGQ 156 (160)
T ss_dssp HHHTSTTTTTCCCCCTTC
T ss_pred HHHccCCCCCCCCChhhc
Confidence 9995 7999999999987
No 45
>1jat_B Ubiquitin-conjugating enzyme variant MMS2; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 2gmi_B
Probab=100.00 E-value=1.9e-38 Score=212.33 Aligned_cols=96 Identities=24% Similarity=0.580 Sum_probs=91.4
Q ss_pred CEEEEEEeCCCCCCCCCcEEEEEEEeCCCCCCCCCeeEEecccccceeeCC-CcE--EecCCCCCCCCCCCHHHHHHHHH
Q psy15855 1 MIWNAVIFGPHDTPFEDGTFKLTVEFTEEYPNKPPTVRFASKMFHPNVYAD-GGI--CLDILQNRWSPTYDVSAILTSIQ 77 (118)
Q Consensus 1 ~~W~~~i~gp~~t~y~gg~f~~~i~fp~~yP~~pP~v~f~t~i~HPnv~~~-g~i--cl~~l~~~W~p~~~i~~vl~~i~ 77 (118)
++|+++|.||+||+|+||+|+++|.||++||++||+|+|.|+||||||+.+ |.| |++++. +|+|+++|++||.+|+
T Consensus 40 ~~w~~~i~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~~G~i~~cL~~l~-~W~p~~~i~~vl~~i~ 118 (138)
T 1jat_B 40 TKWNGTILGPPHSNHENRIYSLSIDCGPNYPDSPPKVTFISKINLPCVNPTTGEVQTDFHTLR-DWKRAYTMETLLLDLR 118 (138)
T ss_dssp CEEEEEEECCSSSTTTTCEEEEEEECCTTTTTSCCEEEESBCCCCTTBCTTTCBBCTTSHHHH-TCCTTCCHHHHHHHHH
T ss_pred eEEEEEEECCCCCCccceEEEEEEECCCCCCCCCCceEEEcccccCCEeCCCCEEeeecccCC-CCCCcCcHHHHHHHHH
Confidence 489999999999999999999999999999999999999999999999986 999 899885 8999999999999999
Q ss_pred HhhcCCCCCCcccHHHHHHH
Q psy15855 78 SLLSDPNPNSPANSMAAQLY 97 (118)
Q Consensus 78 ~ll~~p~~~~p~n~~a~~~~ 97 (118)
++|.+|++++|+|.+||.+|
T Consensus 119 ~ll~~pn~~~p~~~~~~~~y 138 (138)
T 1jat_B 119 KEMATPANKKLRQPKEGETF 138 (138)
T ss_dssp HHHTSHHHHTSCCCCTTCBC
T ss_pred HHHcCCCCCCCCCcchhhcC
Confidence 99999999999999988654
No 46
>2fo3_A Ubiquitin-conjugating enzyme; SGC, UBC, structural genomics, structural genomics consortium, unknown function; 1.86A {Plasmodium vivax} SCOP: d.20.1.1
Probab=100.00 E-value=2.2e-36 Score=199.34 Aligned_cols=87 Identities=34% Similarity=0.700 Sum_probs=79.6
Q ss_pred CEEEEEEeCCCCCCCCCcEEEEEEEeCCCCCCCCCeeEEeccc-ccceeeCCCcEEecCCCCCCCCCCCHHHHHHHHHHh
Q psy15855 1 MIWNAVIFGPHDTPFEDGTFKLTVEFTEEYPNKPPTVRFASKM-FHPNVYADGGICLDILQNRWSPTYDVSAILTSIQSL 79 (118)
Q Consensus 1 ~~W~~~i~gp~~t~y~gg~f~~~i~fp~~yP~~pP~v~f~t~i-~HPnv~~~g~icl~~l~~~W~p~~~i~~vl~~i~~l 79 (118)
++|+++|.||+||+|+||.|+++|.||++||++||+|+|.|++ |||||+.+|.||+++|.++|+|++++.+||.+|+++
T Consensus 36 ~~w~~~i~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~~HPnv~~~G~iCl~iL~~~W~P~~~i~~vl~si~~l 115 (125)
T 2fo3_A 36 RIWIVKYVGLENTIYANEVYKLKIIFPDDYPLKPPIVYFLQKPPKHTHVYSNGDICLSLLGDDYNPSLSISGLVLSIISM 115 (125)
T ss_dssp TEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSSCCCBTTBCTTSBBCCGGGTTTCCTTCCHHHHHHHHHHH
T ss_pred hhhheEEeCCCCCCcCCCEEEEEEEcCCCCCCCCCEEEEeCCCCCCCcCCCCCEEEchhcCCCCCCCCcHHHHHHHHHHH
Confidence 5899999999999999999999999999999999999999997 999999999999999999999999999999999999
Q ss_pred hcCCCCCC
Q psy15855 80 LSDPNPNS 87 (118)
Q Consensus 80 l~~p~~~~ 87 (118)
|.+|+.+.
T Consensus 116 l~~p~~~~ 123 (125)
T 2fo3_A 116 LSSAKEKK 123 (125)
T ss_dssp HC------
T ss_pred HhCccccc
Confidence 99998753
No 47
>2hlw_A Ubiquitin-conjugating enzyme E2 variant 1; ubiquitin-conjugating enzyme variant, UBC13, HUBC13, polyubiquitination, ligase, signaling protein; NMR {Homo sapiens}
Probab=100.00 E-value=4.5e-37 Score=211.91 Aligned_cols=94 Identities=26% Similarity=0.572 Sum_probs=90.5
Q ss_pred CEEEEEEeCCCCCCCCCcEEEEEEEeCCCCCCCCCeeEEecccccceee-CCCcEEecCCC--CCCCCCCCHHHHHHHHH
Q psy15855 1 MIWNAVIFGPHDTPFEDGTFKLTVEFTEEYPNKPPTVRFASKMFHPNVY-ADGGICLDILQ--NRWSPTYDVSAILTSIQ 77 (118)
Q Consensus 1 ~~W~~~i~gp~~t~y~gg~f~~~i~fp~~yP~~pP~v~f~t~i~HPnv~-~~g~icl~~l~--~~W~p~~~i~~vl~~i~ 77 (118)
++|+++|.||+||+|+||+|+++|.||++||++||+|+|.|+||||||+ .+|.||+++|. ++|+|+++|++||.+|+
T Consensus 69 ~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~i~HPNV~~~~G~ICl~iL~~~~~WsP~~ti~~vL~sI~ 148 (170)
T 2hlw_A 69 TRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKINMNGVNSSNGVVDPRAISVLAKWQNSYSIKVVLQELR 148 (170)
T ss_dssp CBEEEEECCCSSSTTSSCCBCEEEECCSSCTTSCCEEEECBCCCCSSBCSSSCBBCTTTCHHHHTCCSSCCHHHHHHHHH
T ss_pred eeeEEEEeCCCCCCcCCcEEEEEEECCCCCCCCCCeeEEecccccCCEeCCCCEEEhhhcCCCCCCCccCcHHHHHHHHH
Confidence 4799999999999999999999999999999999999999999999999 79999999998 89999999999999999
Q ss_pred Hhhc-CCCCCCcccHHHH
Q psy15855 78 SLLS-DPNPNSPANSMAA 94 (118)
Q Consensus 78 ~ll~-~p~~~~p~n~~a~ 94 (118)
++|. +|++++|+|.|||
T Consensus 149 ~ll~~~pn~~~P~n~eaa 166 (170)
T 2hlw_A 149 RLMMSKENMKLPQPPEGQ 166 (170)
T ss_dssp HHHHSTTTSSSCCCSSCC
T ss_pred HHHccCCCCCCCCCcccc
Confidence 9997 5999999999887
No 48
>2h2y_A Ubiquitin-conjugating enzyme; structural genomics, unknown function, structural genomics consortium, SGC; 2.80A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=1.1e-35 Score=198.55 Aligned_cols=85 Identities=34% Similarity=0.707 Sum_probs=82.5
Q ss_pred CEEEEEEeCCCCCCCCCcEEEEEEEeCCCCCCCCCeeEEeccc-ccceeeCCCcEEecCCCCCCCCCCCHHHHHHHHHHh
Q psy15855 1 MIWNAVIFGPHDTPFEDGTFKLTVEFTEEYPNKPPTVRFASKM-FHPNVYADGGICLDILQNRWSPTYDVSAILTSIQSL 79 (118)
Q Consensus 1 ~~W~~~i~gp~~t~y~gg~f~~~i~fp~~yP~~pP~v~f~t~i-~HPnv~~~g~icl~~l~~~W~p~~~i~~vl~~i~~l 79 (118)
++|+++|.||+||+|+||.|+++|.||++||++||+|+|.|++ |||||+.+|.||+++|.++|+|+++|.+||.+|++|
T Consensus 50 ~~W~~~I~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~~HPnv~~~G~ICl~iL~~~WsP~~ti~~vL~si~sl 129 (136)
T 2h2y_A 50 RIWIVQYVGLENTIYANEVYKIKIIFPDNYPLKPPIVYFLQKPPKHTHVYSNGDICLSVLGDDYNPSLSISGLILSIISM 129 (136)
T ss_dssp TEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSSCCCCTTBCTTCCBCCGGGTTTCCTTCCHHHHHHHHHHH
T ss_pred cccEEEEECCCCCceeCCEEEEEEEeCCCCCCCCCEEEEeCCCCCCCcCCCCCEEECccccCCCCCCCcHHHHHHHHHHH
Confidence 5899999999999999999999999999999999999999997 999999999999999999999999999999999999
Q ss_pred hcCCCC
Q psy15855 80 LSDPNP 85 (118)
Q Consensus 80 l~~p~~ 85 (118)
|.+|+.
T Consensus 130 l~~p~~ 135 (136)
T 2h2y_A 130 LSSAKE 135 (136)
T ss_dssp HSSSCC
T ss_pred HhCcCc
Confidence 999874
No 49
>2a7l_A Hypothetical ubiquitin-conjugating enzyme LOC55284; structural genomics consortium, (SGC), ligase; 1.82A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=9.7e-35 Score=193.87 Aligned_cols=81 Identities=38% Similarity=0.739 Sum_probs=78.8
Q ss_pred CEEEEEEeCCCCCCCCCcEEEEEEEeCCCCCCCCCeeEEecccc--cceeeCCCcEEecCCCCCCCCCCCHHHHHHHHHH
Q psy15855 1 MIWNAVIFGPHDTPFEDGTFKLTVEFTEEYPNKPPTVRFASKMF--HPNVYADGGICLDILQNRWSPTYDVSAILTSIQS 78 (118)
Q Consensus 1 ~~W~~~i~gp~~t~y~gg~f~~~i~fp~~yP~~pP~v~f~t~i~--HPnv~~~g~icl~~l~~~W~p~~~i~~vl~~i~~ 78 (118)
++|+++|.||+||||+||.|+++|.||++||++||+|+|.|++| ||||+.+|+||+++|.++|+|+++|++||.+|++
T Consensus 54 ~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~i~~~HPNV~~~G~ICL~iL~~~WsP~~ti~~vL~sI~s 133 (136)
T 2a7l_A 54 TQWIVDMEGAPGTLYEGEKFQLLFKFSSRYPFDSPQVMFTGENIPVHPHVYSNGHICLSILTEDWSPALSVQSVCLSIIS 133 (136)
T ss_dssp EEEEEEEECCTTSTTTTCEEEEEEEECTTTTTSCCEEEEESSCCCCBTTBCTTCBBCCGGGTTTCCTTSCHHHHHHHHHH
T ss_pred ceeEEEEECCCCCccccEEEEEEEECCCCCCCCCCEEEEeCCCcCCCccCCCCCeEEchhcCCCCCCCCcHHHHHHHHHH
Confidence 47999999999999999999999999999999999999999999 9999999999999999999999999999999999
Q ss_pred hhc
Q psy15855 79 LLS 81 (118)
Q Consensus 79 ll~ 81 (118)
||.
T Consensus 134 lL~ 136 (136)
T 2a7l_A 134 MLS 136 (136)
T ss_dssp HTC
T ss_pred HhC
Confidence 984
No 50
>2f4w_A Ubiquitin-conjugating enzyme E2, J2; endoplasmic reticulum, ligase, UBL conjugation pathway, structural genomics consortium (SGC); 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=99.98 E-value=2.3e-32 Score=190.89 Aligned_cols=103 Identities=25% Similarity=0.591 Sum_probs=82.0
Q ss_pred CEEEEEEeCCCCCCCCCcEEEEEEEeCCCCCCCCCeeEEecccccceeeCCCcEEecCC---CCCCCCCCCHHHHHHHHH
Q psy15855 1 MIWNAVIFGPHDTPFEDGTFKLTVEFTEEYPNKPPTVRFASKMFHPNVYADGGICLDIL---QNRWSPTYDVSAILTSIQ 77 (118)
Q Consensus 1 ~~W~~~i~gp~~t~y~gg~f~~~i~fp~~yP~~pP~v~f~t~i~HPnv~~~g~icl~~l---~~~W~p~~~i~~vl~~i~ 77 (118)
++|+++|.||+||||+||+|+++|.||++||++||+|+|.|+ ||||+.+|.||+++| .++|+|+++|.+||.+|+
T Consensus 44 ~~W~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~v~f~T~--~~~~~~~G~ICL~iL~~~~~~W~P~~ti~~vL~si~ 121 (187)
T 2f4w_A 44 LEWHYVVRGPEMTPYEGGYYHGKLIFPREFPFKPPSIYMITP--NGRFKCNTRLCLSITDFHPDTWNPAWSVSTILTGLL 121 (187)
T ss_dssp EEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSC--CSSBCTTSCBC----------CCTTCCHHHHHHHHH
T ss_pred ceeEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCcccccCC--CceeccCCeEeeeccccCccCCCCcCcHHHHHHHHH
Confidence 479999999999999999999999999999999999999999 999999999999999 689999999999999999
Q ss_pred HhhcCCCCCCc---ccHHHHHHHHHCHHHHH
Q psy15855 78 SLLSDPNPNSP---ANSMAAQLYKENRREYE 105 (118)
Q Consensus 78 ~ll~~p~~~~p---~n~~a~~~~~~~~~~f~ 105 (118)
++|.+|+++.. ......+.|..+...|+
T Consensus 122 sll~~p~p~~g~~~~~~~~r~~~a~~s~~~~ 152 (187)
T 2f4w_A 122 SFMVEKGPTLGSIETSDFTKRQLAVQSLAFN 152 (187)
T ss_dssp HHHHSCCCCTTBCCCCHHHHHHHHHHHHHHH
T ss_pred HHhcCCCCCCcccccChHHHHHHHHHHHHHh
Confidence 99999887642 12333444444443333
No 51
>1zuo_A Hypothetical protein LOC92912; ligase, ubiquitin-conjugating enzyme, structural genomics consortium ,SGC; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 2qgx_A
Probab=99.98 E-value=1.2e-34 Score=202.38 Aligned_cols=108 Identities=20% Similarity=0.481 Sum_probs=95.7
Q ss_pred CEEEEEEeCC-CCCCCCC-----------cEEEEEEEeCCCCCCCCCeeEEecccccc-eeeCCCcEEecCCC-CCCCCC
Q psy15855 1 MIWNAVIFGP-HDTPFED-----------GTFKLTVEFTEEYPNKPPTVRFASKMFHP-NVYADGGICLDILQ-NRWSPT 66 (118)
Q Consensus 1 ~~W~~~i~gp-~~t~y~g-----------g~f~~~i~fp~~yP~~pP~v~f~t~i~HP-nv~~~g~icl~~l~-~~W~p~ 66 (118)
++|+++|.|| ++|||+| |.|+++|.||++||++||+|+|.|++||| ||+.+|.||+++|. ++|+|+
T Consensus 60 ~~W~~~I~Gp~~~tpy~ggl~~~~~~~g~g~f~l~i~fp~~YP~~PP~V~f~tpi~hPnnV~~~G~ICL~iL~~~~WsP~ 139 (186)
T 1zuo_A 60 YDWHVKLQKVDPDSPLHSDLQILKEKEGIEYILLNFSFKDNFPFDPPFVRVVLPVLSGGYVLGGGALCMELLTKQGWSSA 139 (186)
T ss_dssp EEEEEEECCCCTTSHHHHHHHHHHHHHSCCSEEEEEECCTTTTSSCCEEEEEESCEESTTBCGGGBBCCGGGSTTTCCTT
T ss_pred ceeEEEEECCCCCCCccccchhhccccCceEEEEEEECCCCCCCCCCeEEEeCCccCCCccCCCCcEEeccCCCCCCCCc
Confidence 4799999998 9999998 89999999999999999999999999999 69999999999997 789999
Q ss_pred CCHHHHHHHHHHhhcCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhc
Q psy15855 67 YDVSAILTSIQSLLSDPNPNSPANSMAAQLYKENRREYEKRVKACVEQSF 116 (118)
Q Consensus 67 ~~i~~vl~~i~~ll~~p~~~~p~n~~a~~~~~~~~~~f~~~v~~~~~~s~ 116 (118)
++|++||.+|+++|.+|+.+. .|..++++|.+++++++.+++
T Consensus 140 ~ti~~VL~sI~slL~~p~a~~--------~~~~~~~~Y~~~~~~~~~~~~ 181 (186)
T 1zuo_A 140 YSIESVIMQINATLVKGKARV--------QFGANKNQYNLARAQQSYNSI 181 (186)
T ss_dssp SCHHHHHHHHHHHHHHTTCEE--------CTTCCTTCCCHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHcCCChhH--------hhccCHHHHhHHHHHHHHHHH
Confidence 999999999999999886542 344456777777777776654
No 52
>2z6o_A UFM1-conjugating enzyme 1; UFC1, ubiquitin, UBL, polymorphism, UBL conjugation pathway, ligase; 1.60A {Homo sapiens} PDB: 2z6p_A 1ywz_A 2in1_A 2k07_A 3e2g_A 3evx_A
Probab=99.91 E-value=1.2e-25 Score=152.61 Aligned_cols=91 Identities=15% Similarity=0.277 Sum_probs=78.3
Q ss_pred CEEEEEEeCCCCCCCCCc----------EEEEEEEeCCCCCCCCCeeEEecc-cccceeeCCCcEEecCC-CC---CCCC
Q psy15855 1 MIWNAVIFGPHDTPFEDG----------TFKLTVEFTEEYPNKPPTVRFASK-MFHPNVYADGGICLDIL-QN---RWSP 65 (118)
Q Consensus 1 ~~W~~~i~gp~~t~y~gg----------~f~~~i~fp~~yP~~pP~v~f~t~-i~HPnv~~~g~icl~~l-~~---~W~p 65 (118)
+.|.+++.||.||+|+|| .|+++|.||++||.+||+|+|.+. ++||||+.+|+||||++ +. .|+|
T Consensus 56 ~~W~~ii~Gp~gT~WeGgcw~~~~~~~y~F~L~~~fPe~YP~~PPeV~F~~~~~~hpnmY~~G~ICLdIL~kp~Ws~~~P 135 (172)
T 2z6o_A 56 NDWFRLESNKEGTRWFGKCWYIHDLLKYEFDIEFDIPITYPTTAPEIAVPELDGKTAKMYRGGKICLTDHFKPLWARNVP 135 (172)
T ss_dssp CCCEEEEECTTSCEEEEEEEEEETTEEEEEEEEEECCTTTTTSCCCCBCGGGTTTCSSBCTTSBBCCCTTHHHHHHHHTT
T ss_pred ceeEEeecCCCCCcccCcccccccccceEEEEEEECCCCCCCCCCeeeeCCCCCCCCCCCCCCcEechhhccccccccCC
Confidence 479999999999999999 999999999999999999999998 99999999999999999 43 4569
Q ss_pred CCCHHHHHHHHHHhhcCCCCCCcccHHHHHHHHH
Q psy15855 66 TYDVSAILTSIQSLLSDPNPNSPANSMAAQLYKE 99 (118)
Q Consensus 66 ~~~i~~vl~~i~~ll~~p~~~~p~n~~a~~~~~~ 99 (118)
+++|.++|.- ....++..|+..+..+
T Consensus 136 ~~~IahiL~l--------gl~pwla~eip~lv~~ 161 (172)
T 2z6o_A 136 KFGLAHLMAL--------GLGPWLAVEIPDLIQK 161 (172)
T ss_dssp SCCHHHHHHH--------THHHHHHHHHHHHHHH
T ss_pred ccCHHHHHhh--------ccCchhhhhhHHHHHc
Confidence 9999998833 2344566777666654
No 53
>3r3q_A Suppressor protein STP22 of temperature-sensitive factor receptor and arginine permease...; endosomal sorting, ESCRT-I; 1.45A {Saccharomyces cerevisiae} SCOP: d.20.1.2 PDB: 3r42_A 1uzx_A*
Probab=99.84 E-value=3.2e-21 Score=131.46 Aligned_cols=84 Identities=23% Similarity=0.449 Sum_probs=74.4
Q ss_pred EEEEEeCCCCCCCCCcE---EEEEEEeCCCCCCCCCeeEEecc----------cc-cceeeCCCcEEecCCCCCCCC-CC
Q psy15855 3 WNAVIFGPHDTPFEDGT---FKLTVEFTEEYPNKPPTVRFASK----------MF-HPNVYADGGICLDILQNRWSP-TY 67 (118)
Q Consensus 3 W~~~i~gp~~t~y~gg~---f~~~i~fp~~yP~~pP~v~f~t~----------i~-HPnv~~~g~icl~~l~~~W~p-~~ 67 (118)
+-..+.|.-.++|+|+. |.+.|.||++||++||.|.|.++ |+ |||||++|+||+++|. +|+| +.
T Consensus 63 ~Ll~l~Gtipv~y~g~~~Yn~pi~IwlP~~YP~~PP~v~v~p~t~~m~~~~~~I~~hpnVD~~G~I~lpyL~-~W~p~~s 141 (162)
T 3r3q_A 63 LLLSIYGTISTGEDGSSPHSIPVIMWVPSMYPVKPPFISINLENFDMNTISSSLPIQEYIDSNGWIALPILH-AWDPAAM 141 (162)
T ss_dssp EEEEEEEEEECSCCTTSCCEEEEEEECCTTTTTSCCEEEECGGGCCTTTSCTTSTHHHHBCTTSBBCCGGGG-SCCGGGC
T ss_pred eEEEEECccCccccCcccccccEEEEeCcccCCCCCEEEEECCCccccccccccCCCCCCCCCCcEeCcccc-cCCCCcC
Confidence 45566676678999999 88999999999999999988651 77 9999999999999995 6999 68
Q ss_pred CHHHHHHHHHHhhcCCCCCC
Q psy15855 68 DVSAILTSIQSLLSDPNPNS 87 (118)
Q Consensus 68 ~i~~vl~~i~~ll~~p~~~~ 87 (118)
++.++|.+|+++|.+|+++.
T Consensus 142 ~L~~ll~~l~~lf~ep~~d~ 161 (162)
T 3r3q_A 142 NLIMVVQELMSLLHEPPQDQ 161 (162)
T ss_dssp CHHHHHHHHHHTTSCCCCCC
T ss_pred cHHHHHHHHHHHhcCCCCCC
Confidence 99999999999999999875
No 54
>3kpa_A Probable ubiquitin fold modifier conjugating ENZY; UBL conjugation pathway, ligase, structural genomics, PSI; 2.20A {Leishmania major} SCOP: d.20.1.4
Probab=99.68 E-value=8e-18 Score=112.25 Aligned_cols=69 Identities=22% Similarity=0.521 Sum_probs=61.5
Q ss_pred EEEEEEeCCCCCCCCCc----------EEEEEEEeCCCCCCCCCeeEEecc-cccceeeCCCcEEecCCCCCCCC-----
Q psy15855 2 IWNAVIFGPHDTPFEDG----------TFKLTVEFTEEYPNKPPTVRFASK-MFHPNVYADGGICLDILQNRWSP----- 65 (118)
Q Consensus 2 ~W~~~i~gp~~t~y~gg----------~f~~~i~fp~~yP~~pP~v~f~t~-i~HPnv~~~g~icl~~l~~~W~p----- 65 (118)
.|...+.||.||+|+|+ .|++++.||.+||.+||+|+|.+. ++|||++.+|+|||++. |+|
T Consensus 59 dWf~~~sn~~GT~W~G~cw~~~~~~kyeFkLefdiP~tYP~tPPeI~Fp~ldgkt~kmYr~GkICLdIh---wkPlW~~n 135 (168)
T 3kpa_A 59 HWFHLESNPQGTRWYGTCWTYYKNEKYEFEMNFDIPVTYPQAPPEIALPELEGKTVKMYRGGKICMTTH---FFPLWARN 135 (168)
T ss_dssp CCEEEEECTTSCEEEEEEEEEETTEEEEEEEEEECCTTTTTSCCCCBCGGGTTTCSSEETTTEECCCTT---HHHHHHHT
T ss_pred CeeeecCCCCCCcccCccceeeccceeEEEEEEeCCccCCCCCCEeecccccCcCccccCCCcEEeccc---cchhhHhc
Confidence 59999999999999999 999999999999999999999995 89999999999999985 665
Q ss_pred --CCCHHHHH
Q psy15855 66 --TYDVSAIL 73 (118)
Q Consensus 66 --~~~i~~vl 73 (118)
.++|...|
T Consensus 136 ~P~fGiahal 145 (168)
T 3kpa_A 136 VPYFGISHVL 145 (168)
T ss_dssp TTTCCHHHHH
T ss_pred CCchhHHHHH
Confidence 45565543
No 55
>3obq_A Tumor susceptibility gene 101 protein; protein transprot, ubiquitin binding, protein transport; 1.40A {Homo sapiens} SCOP: d.20.1.2 PDB: 3obs_A 3obu_A 3obx_A 3p9g_A* 3p9h_A* 2f0r_A 1kpp_A 1kpq_A 1m4p_A 1m4q_A 1s1q_A
Probab=99.65 E-value=1.7e-16 Score=106.48 Aligned_cols=76 Identities=24% Similarity=0.487 Sum_probs=66.6
Q ss_pred CEEEEEEeCCCCCCCCCcEEE--EEEEeCCCCCCCCCeeEEecc------cccceeeCCCcEEecCCCCCCCC-CCCHHH
Q psy15855 1 MIWNAVIFGPHDTPFEDGTFK--LTVEFTEEYPNKPPTVRFASK------MFHPNVYADGGICLDILQNRWSP-TYDVSA 71 (118)
Q Consensus 1 ~~W~~~i~gp~~t~y~gg~f~--~~i~fp~~yP~~pP~v~f~t~------i~HPnv~~~g~icl~~l~~~W~p-~~~i~~ 71 (118)
|.|.++|. .+|+|++|. +.|.||++||++||.| |.++ ..|||||.+|+||+++|.+ |++ ..+|.+
T Consensus 54 L~l~GtIp----v~y~g~~y~iPi~Iwlp~~YP~~pP~v-fv~pt~~m~I~~~~~Vd~~G~i~lpyL~~-W~~~~snL~~ 127 (146)
T 3obq_A 54 MNLTGTIP----VPYRGNTYNIPICLWLLDTYPYNPPIC-FVKPTSSMTIKTGKHVDANGKIYLPYLHE-WKHPQSDLLG 127 (146)
T ss_dssp EEEEEEEE----EECSSCEEEEEEEEECCTTTTTSCCEE-EECCCTTEEECCBTTBCTTCBBCCHHHHT-CCTTTCCHHH
T ss_pred EEEEEEee----eeecCccccceEEEEeCccCCCCCCEE-EEeCCCCCEECCCCCCCCCCCEecccccc-cCCCCCCHHH
Confidence 46788887 479999998 5999999999999999 6655 4899999999999999965 987 789999
Q ss_pred HHHHHHHhhcC
Q psy15855 72 ILTSIQSLLSD 82 (118)
Q Consensus 72 vl~~i~~ll~~ 82 (118)
++..++++|.+
T Consensus 128 ll~~l~~~F~~ 138 (146)
T 3obq_A 128 LIQVMIVVFGD 138 (146)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHhh
Confidence 99999999973
No 56
>2ebm_A RWD domain-containing protein 1; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.17 E-value=0.038 Score=35.14 Aligned_cols=25 Identities=24% Similarity=0.477 Sum_probs=21.1
Q ss_pred CcEEEEEEEeCCCCCCCCCeeEEec
Q psy15855 17 DGTFKLTVEFTEEYPNKPPTVRFAS 41 (118)
Q Consensus 17 gg~f~~~i~fp~~yP~~pP~v~f~t 41 (118)
.-.+.+.|.+|++||.+||.+...+
T Consensus 54 ~~~~~L~v~~p~~YP~~~P~i~l~~ 78 (128)
T 2ebm_A 54 TVQTTLKFTYSEKYPDEAPLYEIFS 78 (128)
T ss_dssp CCBEEEEEECCSSTTTSCCEEEEEE
T ss_pred ceeEEEEEEeCCCCCCCCceEEEEc
Confidence 4478899999999999999997543
No 57
>3zqs_A E3 ubiquitin-protein ligase fancl; HET: P6G; 2.00A {Homo sapiens}
Probab=94.97 E-value=0.095 Score=35.98 Aligned_cols=51 Identities=16% Similarity=0.420 Sum_probs=39.1
Q ss_pred CCcEEEEEEEeCCCCCCCCCeeEEecccccceeeCCCcEEecCCCCCCCCCCCHHHHHHHHHHhh
Q psy15855 16 EDGTFKLTVEFTEEYPNKPPTVRFASKMFHPNVYADGGICLDILQNRWSPTYDVSAILTSIQSLL 80 (118)
Q Consensus 16 ~gg~f~~~i~fp~~yP~~pP~v~f~t~i~HPnv~~~g~icl~~l~~~W~p~~~i~~vl~~i~~ll 80 (118)
.|....++|.++.+||.++|.+...-++ | +.-.|+|..++.+++...+..+
T Consensus 36 ~gR~H~l~v~l~~~yp~~~P~~~~DlP~--~------------~~~~w~~~ssL~~v~~qF~~~L 86 (186)
T 3zqs_A 36 SGREHLITLKLKAKYPAESPDYFVDFPV--P------------FCASWTPQSSLISIYSQFLAAI 86 (186)
T ss_dssp TSCEEEEEEECCTTTTTSCCEEECCCSS--C------------CCCCCCTTCCHHHHHHHHHHHH
T ss_pred CCCeEEEEEEECCCCCCCCCeeEEcCCC--C------------cccccCCCccHHHHHHHHHHHH
Confidence 4788999999999999999988543332 1 1247999999998888776665
No 58
>2daw_A RWD domain containing protein 2; alpha+beta sandwich fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.20.1.3
Probab=94.08 E-value=0.17 Score=33.38 Aligned_cols=23 Identities=22% Similarity=0.235 Sum_probs=20.4
Q ss_pred EEEEEEEeCCCCCCCCCeeEEec
Q psy15855 19 TFKLTVEFTEEYPNKPPTVRFAS 41 (118)
Q Consensus 19 ~f~~~i~fp~~yP~~pP~v~f~t 41 (118)
.+.+.|.+|.+||..+|.|...+
T Consensus 76 ~i~L~v~lP~~YP~~~P~i~l~~ 98 (154)
T 2daw_A 76 KIDLQVTMPHSYPYLALQLFGRS 98 (154)
T ss_dssp EEEEEEEECSSTTSSCCEEEEEC
T ss_pred eEEEEEEcCCCCCCCCCcEEEEe
Confidence 78999999999999999997554
No 59
>2yz0_A Serine/threonine-protein kinase GCN2; A-B-B-B-B-A-A, amino acid starvation signal response, EIF2alpha kinase, transferase; NMR {Saccharomyces cerevisiae}
Probab=93.92 E-value=0.19 Score=32.22 Aligned_cols=24 Identities=25% Similarity=0.574 Sum_probs=20.7
Q ss_pred cEEEEEEEeCCCCCCCCCeeEEec
Q psy15855 18 GTFKLTVEFTEEYPNKPPTVRFAS 41 (118)
Q Consensus 18 g~f~~~i~fp~~yP~~pP~v~f~t 41 (118)
-.+.+.+.+|++||..+|.|...+
T Consensus 62 ~~~~L~~~~p~~YP~~~P~i~l~~ 85 (138)
T 2yz0_A 62 SSITLHFAMTPMYPYTAPEIEFKN 85 (138)
T ss_dssp CEEEEEEECCSSTTSSCCEEEEEC
T ss_pred eEEEEEEECCCCCCCCCCeEEEec
Confidence 477899999999999999997654
No 60
>2day_A Ring finger protein 25; ligase, metal-binding, UB1 conjugation, UB1 conjugation pathway, RWD domain, alpha+beta sandwich fold, structural genomics; NMR {Homo sapiens} SCOP: d.20.1.3 PDB: 2dmf_A
Probab=93.91 E-value=0.21 Score=31.55 Aligned_cols=24 Identities=25% Similarity=0.589 Sum_probs=21.0
Q ss_pred cEEEEEEEeCCCCCCCCCeeEEec
Q psy15855 18 GTFKLTVEFTEEYPNKPPTVRFAS 41 (118)
Q Consensus 18 g~f~~~i~fp~~yP~~pP~v~f~t 41 (118)
-.+.+.|.+|++||..+|.|...+
T Consensus 59 ~~~~L~~~~p~~YP~~~P~i~~~~ 82 (128)
T 2day_A 59 VCFTLVLQVPAEYPHEVPQISIRN 82 (128)
T ss_dssp CEEEEEEEECSSTTSSCCEEEEEE
T ss_pred eeEEEEEEcCCCCCCCCCCeEEEc
Confidence 478899999999999999997665
No 61
>2ebk_A RWD domain-containing protein 3; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=93.28 E-value=0.65 Score=29.25 Aligned_cols=23 Identities=17% Similarity=0.374 Sum_probs=19.9
Q ss_pred cEEEEEEEeCCCCCCCCCeeEEe
Q psy15855 18 GTFKLTVEFTEEYPNKPPTVRFA 40 (118)
Q Consensus 18 g~f~~~i~fp~~yP~~pP~v~f~ 40 (118)
-.+.+.+.+|++||..+|.|...
T Consensus 56 ~~~~L~~~~p~~YP~~~P~i~l~ 78 (128)
T 2ebk_A 56 IPLELVFHLPVNYPSCLPGISIN 78 (128)
T ss_dssp CEEEEEEEECSSTTSSCCCCCCC
T ss_pred eEEEEEEECCCCCCCCCCeEEEE
Confidence 47889999999999999999544
No 62
>1ukx_A GCN2, GCN2 EIF2alpha kinase; UBC-like fold, triple beta-turns, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.20.1.3
Probab=92.54 E-value=0.081 Score=33.88 Aligned_cols=23 Identities=22% Similarity=0.452 Sum_probs=20.2
Q ss_pred cEEEEEEEeCCCCCCCCCeeEEe
Q psy15855 18 GTFKLTVEFTEEYPNKPPTVRFA 40 (118)
Q Consensus 18 g~f~~~i~fp~~yP~~pP~v~f~ 40 (118)
-.+.+.|.+|++||..+|.|...
T Consensus 63 ~~~~L~v~~p~~YP~~~P~i~l~ 85 (137)
T 1ukx_A 63 VQVELRVKCPPTYPDVVPEIDLK 85 (137)
T ss_dssp CEEEEEECCCTTTTSSCCCCEEE
T ss_pred eEEEEEEECCCCCCCCCCcEEEe
Confidence 46889999999999999999764
No 63
>2dax_A Protein C21ORF6; RWD domain, alpha+beta sandwich fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.20.1.3
Probab=91.87 E-value=0.15 Score=33.37 Aligned_cols=23 Identities=26% Similarity=0.450 Sum_probs=20.3
Q ss_pred EEEEEEEeCCCCCCCCCeeEEec
Q psy15855 19 TFKLTVEFTEEYPNKPPTVRFAS 41 (118)
Q Consensus 19 ~f~~~i~fp~~yP~~pP~v~f~t 41 (118)
.+.+.|.+|.+||..||.|....
T Consensus 74 ~l~L~v~lP~~YP~~~P~i~l~~ 96 (152)
T 2dax_A 74 MFSLACILPFKYPAVLPEITVRS 96 (152)
T ss_dssp EEEEEEEECSSTTSSCCCCEEEC
T ss_pred eEEEEEECCCCCCCCCCeEEEEc
Confidence 67899999999999999997654
No 64
>2cwb_A Chimera of immunoglobulin G binding protein G and ubiquitin-like protein SB132; helical bundle, protein binding; NMR {Streptococcus SP} PDB: 2den_A
Probab=70.37 E-value=0.89 Score=28.41 Aligned_cols=31 Identities=3% Similarity=-0.078 Sum_probs=0.0
Q ss_pred CCCCCCcccHHHHHHHHHCHHHHHHHHHHHH
Q psy15855 82 DPNPNSPANSMAAQLYKENRREYEKRVKACV 112 (118)
Q Consensus 82 ~p~~~~p~n~~a~~~~~~~~~~f~~~v~~~~ 112 (118)
......|.+.++|++|+++++.|.+.++.+.
T Consensus 20 ~~~~~~PQDA~VA~qy~~~~~~f~~TAr~WT 50 (108)
T 2cwb_A 20 GETTTEAVDAATAEKVFKQYANDNGVDGEWT 50 (108)
T ss_dssp -------------------------------
T ss_pred CcccCCchhHHHHHHHHhchhcccccccccc
Confidence 4445679999999999999999999999876
No 65
>2bum_A Protocatechuate 3,4-dioxygenase alpha chain; oxidoreductase, aromatic degradation, non-heme iron, beta-SA mixed alpha/beta structure; 1.80A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1eo2_A 1eob_A* 1eoc_A* 1eoa_A 2buq_A 2bur_A* 2but_A 2buu_A* 2buv_A* 2buw_A* 1eo9_A 2bux_A 2buy_A 2buz_A* 2bv0_A*
Probab=36.88 E-value=34 Score=23.49 Aligned_cols=25 Identities=12% Similarity=0.311 Sum_probs=21.6
Q ss_pred CCcEEEEEEEeCCCCCC-----CCCeeEEe
Q psy15855 16 EDGTFKLTVEFTEEYPN-----KPPTVRFA 40 (118)
Q Consensus 16 ~gg~f~~~i~fp~~yP~-----~pP~v~f~ 40 (118)
+.|.|.|+-.+|--||. .||.|.|.
T Consensus 109 ~~G~y~F~TI~Pg~yp~~~G~~R~~HIH~~ 138 (209)
T 2bum_A 109 GTGFWSFNTIKPGAVPGRKGSTQAPHISLI 138 (209)
T ss_dssp TTCCEEEEEECCCCCBCSTTCBCCCCEEEE
T ss_pred CCcEEEEEEEccCcccCCCCCccCcEEEEE
Confidence 47899999999999998 78888765
No 66
>2fkn_A Urocanate hydratase; rossman fold, lyase; HET: NAD; 2.20A {Bacillus subtilis}
Probab=36.07 E-value=39 Score=26.62 Aligned_cols=27 Identities=15% Similarity=0.206 Sum_probs=22.4
Q ss_pred cHHHHHHHHHCHHHHHHHHHHHHHHhc
Q psy15855 90 NSMAAQLYKENRREYEKRVKACVEQSF 116 (118)
Q Consensus 90 n~~a~~~~~~~~~~f~~~v~~~~~~s~ 116 (118)
-.|+..+..+|+++|.++|++++++..
T Consensus 277 ~ee~~~l~~~dp~~~~~~~~~Sm~rhv 303 (552)
T 2fkn_A 277 LDEADRLRQDTPELYVRLAKQSMKKHV 303 (552)
T ss_dssp HHHHHHHHHHCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCHHHHHHHHHHHHHHHH
Confidence 356777788999999999999988764
No 67
>1x87_A Urocanase protein; structural genomics, protein STR initiative, MCSG, PSI, midwest center for structural genomi; HET: MSE NAD; 2.40A {Geobacillus stearothermophilus} SCOP: e.51.1.1
Probab=35.78 E-value=40 Score=26.57 Aligned_cols=26 Identities=23% Similarity=0.364 Sum_probs=22.0
Q ss_pred HHHHHHHHHCHHHHHHHHHHHHHHhc
Q psy15855 91 SMAAQLYKENRREYEKRVKACVEQSF 116 (118)
Q Consensus 91 ~~a~~~~~~~~~~f~~~v~~~~~~s~ 116 (118)
.|+..+..+|+++|.++|++++++..
T Consensus 277 ee~~~l~~~dp~~~~~~~~~Sm~rhv 302 (551)
T 1x87_A 277 DEAAELRARDPKQYIARAKQSIAAHV 302 (551)
T ss_dssp HHHHHHHHHCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCHHHHHHHHHHHHHHHH
Confidence 56677788999999999999988764
No 68
>1uwk_A Urocanate hydratase; hydrolase, urocanase, imidazolonepropionate, histidine metabolism, lyase; HET: NAD URO; 1.19A {Pseudomonas putida} SCOP: e.51.1.1 PDB: 1w1u_A* 1uwl_A* 2v7g_A*
Probab=35.38 E-value=41 Score=26.55 Aligned_cols=26 Identities=8% Similarity=-0.042 Sum_probs=22.0
Q ss_pred HHHHHHHHHCHHHHHHHHHHHHHHhc
Q psy15855 91 SMAAQLYKENRREYEKRVKACVEQSF 116 (118)
Q Consensus 91 ~~a~~~~~~~~~~f~~~v~~~~~~s~ 116 (118)
.|+..+..+|+++|.++|++++++..
T Consensus 282 ee~~~l~~~dp~~~~~~~~~Sm~rhv 307 (557)
T 1uwk_A 282 EQYRDRAQTEPAAVVKAAKQSMAVHV 307 (557)
T ss_dssp HHHHHHHHHCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCHHHHHHHHHHHHHHHH
Confidence 56677788999999999999988764
No 69
>3rls_A YAF9, protein AF-9 homolog; yeats domain, histone, transcription; 1.70A {Saccharomyces cerevisiae} PDB: 3fk3_A
Probab=34.30 E-value=1e+02 Score=20.60 Aligned_cols=39 Identities=21% Similarity=0.509 Sum_probs=29.3
Q ss_pred EEEEEEeCCCCCCCCCcEEEEEEEeCCCCCCCCCeeEEecc
Q psy15855 2 IWNAVIFGPHDTPFEDGTFKLTVEFTEEYPNKPPTVRFASK 42 (118)
Q Consensus 2 ~W~~~i~gp~~t~y~gg~f~~~i~fp~~yP~~pP~v~f~t~ 42 (118)
+|.+.+.|+.|.-...-+=++...+.+.||. |...+..+
T Consensus 34 ~WtVyVr~~~~edis~~v~KV~F~LHpSF~n--p~Rvv~~P 72 (175)
T 3rls_A 34 LWTIFVRGPQNEDISYFIKKVVFKLHDTYPN--PVRSIEAP 72 (175)
T ss_dssp EEEEEEECGGGCCCTTTEEEEEEECCTTSSS--CEEEECSS
T ss_pred EEEEEEECCCCCChhheEEEEEEEcCCCCCC--CcEEEeCC
Confidence 6999999988765555566899999999974 66555443
No 70
>2jrw_A Cyclic extended PEP.1; acetylcholine receptor, phage display, peptide cyclization, immune system; NMR {Synthetic}
Probab=29.74 E-value=15 Score=16.35 Aligned_cols=14 Identities=29% Similarity=0.681 Sum_probs=7.7
Q ss_pred CCCeeEEecccccc
Q psy15855 33 KPPTVRFASKMFHP 46 (118)
Q Consensus 33 ~pP~v~f~t~i~HP 46 (118)
..|.-.|..+-|||
T Consensus 6 tlpenyfserpyhp 19 (26)
T 2jrw_A 6 TLPENYFSERPYHP 19 (26)
T ss_dssp CCSSSSCCSSSCCS
T ss_pred ccchhhcccCCCCC
Confidence 33444466666665
No 71
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=24.96 E-value=73 Score=19.81 Aligned_cols=32 Identities=13% Similarity=0.149 Sum_probs=20.3
Q ss_pred eeCCCcEEecCCCCCCCCCCCHHHHHHHHHHh
Q psy15855 48 VYADGGICLDILQNRWSPTYDVSAILTSIQSL 79 (118)
Q Consensus 48 v~~~g~icl~~l~~~W~p~~~i~~vl~~i~~l 79 (118)
||++|.|-.......+....++.+++..|++|
T Consensus 125 ID~~G~I~~~~~~~~~~~~~~~~eil~~l~~L 156 (157)
T 4g2e_A 125 IDKEGKVRYKWVSDDPTKEPPYDEIEKVVKSL 156 (157)
T ss_dssp ECTTSBEEEEEEESSTTCCCCHHHHHHHHHHT
T ss_pred ECCCCEEEEEEECCCCCCCCCHHHHHHHHHHh
Confidence 67888875433333444455678888777764
No 72
>2ccv_A Helix pomatia agglutinin; lectin, snail; HET: A2G NAG; 1.30A {Helix pomatia} SCOP: b.154.1.1 PDB: 2cgy_A* 2cgz_A* 2ce6_A
Probab=23.64 E-value=1.2e+02 Score=18.00 Aligned_cols=26 Identities=19% Similarity=0.453 Sum_probs=19.9
Q ss_pred CCcEEEEEEEeCCCCCCCCCeeEEecc
Q psy15855 16 EDGTFKLTVEFTEEYPNKPPTVRFASK 42 (118)
Q Consensus 16 ~gg~f~~~i~fp~~yP~~pP~v~f~t~ 42 (118)
-+..+...|.|+..|+ .+|+|.+.-.
T Consensus 27 g~R~~~~~V~F~~~F~-~~P~V~v~l~ 52 (101)
T 2ccv_A 27 NTRELAKNITFASPYC-RPPVVLLSIT 52 (101)
T ss_dssp SCEEEEEEEECSSCCS-SCCEEEEEEE
T ss_pred cceEEEEEeEeCcccC-CCCEEEEEeE
Confidence 3447788899999998 5999976543
No 73
>4gqc_A Thiol peroxidase, peroxiredoxin Q; CXXXXC motif, fully folded, locally unfolded, peroxide, DTT, structural genomics, riken; 2.00A {Aeropyrum pernix} PDB: 2cx3_A 2cx4_A 4gqf_A
Probab=23.12 E-value=1e+02 Score=19.36 Aligned_cols=33 Identities=12% Similarity=0.182 Sum_probs=20.9
Q ss_pred eeCCCcEEecCCCCCCCCCCCHHHHHHHHHHhh
Q psy15855 48 VYADGGICLDILQNRWSPTYDVSAILTSIQSLL 80 (118)
Q Consensus 48 v~~~g~icl~~l~~~W~p~~~i~~vl~~i~~ll 80 (118)
||++|.|-.........-..++.++|..|+.+.
T Consensus 127 ID~~G~I~~~~~~~~~~~~~~~~eil~~l~~l~ 159 (164)
T 4gqc_A 127 VKPDGTVAYKWVTDNPLNEPDYDEVVREANKIA 159 (164)
T ss_dssp ECTTSBEEEEEECSCTTCCCCHHHHHHHHHHHH
T ss_pred ECCCCEEEEEEEeCCCCCCCCHHHHHHHHHHHh
Confidence 578888865333333333346888888887765
No 74
>2cu9_A Spcia1, histone chaperone CIA1; immunoglobulin fold, structural genomics, NPPSFA; 1.80A {Schizosaccharomyces pombe} SCOP: b.1.22.1 PDB: 2dze_A* 2z34_A 2z3f_A
Probab=22.96 E-value=1.3e+02 Score=19.83 Aligned_cols=36 Identities=19% Similarity=0.327 Sum_probs=26.7
Q ss_pred CEEEEEEeCCCCC-------------CCCCcEEEEEEEeCCCCCCCCCe
Q psy15855 1 MIWNAVIFGPHDT-------------PFEDGTFKLTVEFTEEYPNKPPT 36 (118)
Q Consensus 1 ~~W~~~i~gp~~t-------------~y~gg~f~~~i~fp~~yP~~pP~ 36 (118)
++|+++..|..++ |..-|.++|.+.-++=-|..-|.
T Consensus 38 lewkliYVgSa~s~~~DQ~Ld~v~VGPi~~G~~kFv~~adpPd~~~IP~ 86 (161)
T 2cu9_A 38 LEWKLTYVGSATSQSYDQILDTLLVGPIPIGINKFVFEADPPNIDLLPQ 86 (161)
T ss_dssp EEEEEEEESSTTSCCCEEEEEEEEECSCCSEEEEEEEEECCCCGGGSSC
T ss_pred eEEEEEEEcCCCCccCCeEeeEEEECCccceEEEEEEEcCCCChhHCCC
Confidence 4788888886654 67789999998877656666555
No 75
>2f4m_B UV excision repair protein RAD23 homolog B; glycoproteins, ubiquitin-dependent protein degradation, NUCL excision repair, peptide:N-glycanase; 1.85A {Mus musculus} SCOP: a.189.1.1 PDB: 2f4o_B*
Probab=22.81 E-value=96 Score=16.94 Aligned_cols=20 Identities=10% Similarity=0.177 Sum_probs=17.5
Q ss_pred ccHHHHHHHHHCHHHHHHHH
Q psy15855 89 ANSMAAQLYKENRREYEKRV 108 (118)
Q Consensus 89 ~n~~a~~~~~~~~~~f~~~v 108 (118)
-|++.+.+...|.++|.+..
T Consensus 37 ~nP~l~~~I~~n~e~Fl~ll 56 (61)
T 2f4m_B 37 ENPQLLQQISQHQEHFIQML 56 (61)
T ss_dssp HCHHHHHHHHHSHHHHHHHH
T ss_pred HCHHHHHHHHHCHHHHHHHH
Confidence 68889999999999998875
No 76
>2bum_B Protocatechuate 3,4-dioxygenase beta chain; oxidoreductase, aromatic degradation, non-heme iron, beta-SA mixed alpha/beta structure; 1.80A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1eo2_B 1eoa_B 1eob_B* 1eoc_B* 1eo9_B 2buq_B 2bur_B* 2bux_B 2buy_B 2buz_B* 2bv0_B* 2buu_B* 2but_B* 2buv_B* 2buw_B*
Probab=21.79 E-value=51 Score=23.18 Aligned_cols=26 Identities=19% Similarity=0.506 Sum_probs=21.8
Q ss_pred CCcEEEEEEEeCCCCC-------CCCCeeEEec
Q psy15855 16 EDGTFKLTVEFTEEYP-------NKPPTVRFAS 41 (118)
Q Consensus 16 ~gg~f~~~i~fp~~yP-------~~pP~v~f~t 41 (118)
+.|.|.|+-.+|--|| ..||.|.|.-
T Consensus 134 ~~G~y~F~TI~Pg~Yp~~~~~~~~RpaHIH~~V 166 (241)
T 2bum_B 134 DNGYYVFRTIKPGPYPWRNRINEWRPAHIHFSL 166 (241)
T ss_dssp TTSEEEEEEECCCCEEESSSTTEEECSEEEEEE
T ss_pred CCceEEEEEecCCccccCCCCCCCcCceEEEEE
Confidence 4789999999999998 4788887753
No 77
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, STRU genomics, NPPSFA; 1.85A {Aquifex aeolicus}
Probab=21.66 E-value=67 Score=20.06 Aligned_cols=33 Identities=9% Similarity=0.240 Sum_probs=20.1
Q ss_pred eeCCCcEEecCCCCCCCCCCCHHHHHHHHHHhh
Q psy15855 48 VYADGGICLDILQNRWSPTYDVSAILTSIQSLL 80 (118)
Q Consensus 48 v~~~g~icl~~l~~~W~p~~~i~~vl~~i~~ll 80 (118)
||++|+|-............+..+++..|..++
T Consensus 139 iD~~G~i~~~~~~~~~~~~~~~~~ll~~l~~ll 171 (171)
T 2yzh_A 139 IDKEGKVAYVQLVPEITEEPNYDEVVNKVKELI 171 (171)
T ss_dssp ECTTSBEEEEEECSBTTSCCCCHHHHHHHHHC-
T ss_pred EcCCCeEEEEEeCCCcCCCCCHHHHHHHHHhhC
Confidence 468898865443223334456778888877654
No 78
>3keb_A Probable thiol peroxidase; structural genomics, APC40679, PSI-2, Pro structure initiative; HET: MSE; 1.80A {Chromobacterium violaceum}
Probab=21.37 E-value=79 Score=21.71 Aligned_cols=46 Identities=13% Similarity=-0.027 Sum_probs=24.8
Q ss_pred eeCCCcEEecCCCCCCCCCCCHHHHHHHHHHhhcCCCCCCcccHHH
Q psy15855 48 VYADGGICLDILQNRWSPTYDVSAILTSIQSLLSDPNPNSPANSMA 93 (118)
Q Consensus 48 v~~~g~icl~~l~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~a 93 (118)
||.+|.|-...........-+..+++..|..+....--..+.-.+|
T Consensus 143 ID~dG~I~~~~~~~~~~~~pd~~evl~~L~~l~~~~~~~~~~~~~~ 188 (224)
T 3keb_A 143 ADAANVVHYSERLANTRDFFDFDAIEKLLQEGEQQAMAAEREAAEA 188 (224)
T ss_dssp ECTTCBEEEEEECSBTTCCCCHHHHHHHHHHHHHHC----------
T ss_pred EcCCCEEEEEEecCCCCCCCCHHHHHHHHHHhhhcccccChhhhhh
Confidence 5678888754444444445678999999988876444444433333
No 79
>2xsu_A Catechol 1,2 dioxygenase; oxidoreductase; HET: PIE; 1.60A {Acinetobacter radioresistens} PDB: 2xsr_A* 2xsv_A*
Probab=21.06 E-value=54 Score=24.03 Aligned_cols=25 Identities=20% Similarity=0.454 Sum_probs=21.0
Q ss_pred CCcEEEEEEEeCCCCC------------------CCCCeeEEe
Q psy15855 16 EDGTFKLTVEFTEEYP------------------NKPPTVRFA 40 (118)
Q Consensus 16 ~gg~f~~~i~fp~~yP------------------~~pP~v~f~ 40 (118)
+.|.|.|+-.+|.-|| ..||.|.|.
T Consensus 187 ~~G~y~F~TI~Pg~Y~ip~dGp~G~lL~~~grh~~RpaHIH~~ 229 (312)
T 2xsu_A 187 VNGKYVALTTMPVGYGCPPEGTTQALLNKLGRHGNRPSHVHYF 229 (312)
T ss_dssp TTSEEEEEEECCCCEECCTTSHHHHHHHHTTCCCEECCEEEEE
T ss_pred CCceEEEEEECcCcccCCCCCcHHHHHHHhhccCCCCceEEEE
Confidence 5789999999999998 568888775
No 80
>1pve_A HHR23B, UV excision repair protein RAD23 homolog B; XPC binding domain, solution structure, nucleotide excision repair, chaps, DNA binding protein; NMR {Homo sapiens} SCOP: a.189.1.1
Probab=20.77 E-value=76 Score=18.03 Aligned_cols=21 Identities=10% Similarity=0.181 Sum_probs=18.6
Q ss_pred ccHHHHHHHHHCHHHHHHHHH
Q psy15855 89 ANSMAAQLYKENRREYEKRVK 109 (118)
Q Consensus 89 ~n~~a~~~~~~~~~~f~~~v~ 109 (118)
-|++.+.+...|.+.|.+...
T Consensus 39 ~NPqL~q~I~~n~e~Fl~ll~ 59 (72)
T 1pve_A 39 ENPQLLQQISQHQEHFIQMLN 59 (72)
T ss_dssp TCHHHHHHHHTTHHHHHHHHH
T ss_pred HCHHHHHHHHHCHHHHHHHHc
Confidence 678899999999999998874
No 81
>1roc_A Anti-silencing protein 1; beta-sandwich, replication, chaperone; 1.50A {Saccharomyces cerevisiae} SCOP: b.1.22.1 PDB: 2ygv_A
Probab=20.08 E-value=1.5e+02 Score=19.37 Aligned_cols=33 Identities=15% Similarity=0.289 Sum_probs=22.8
Q ss_pred CEEEEEEeCCCCC-------------CCCCcEEEEEEEeCCCCCCC
Q psy15855 1 MIWNAVIFGPHDT-------------PFEDGTFKLTVEFTEEYPNK 33 (118)
Q Consensus 1 ~~W~~~i~gp~~t-------------~y~gg~f~~~i~fp~~yP~~ 33 (118)
++|+.+..|...+ |-.-|.++|.+.-++=-|..
T Consensus 39 lewkliYVgSa~s~~~DQ~Ld~v~vGPi~~G~~kFv~~adpPd~~~ 84 (155)
T 1roc_A 39 LEWKLTYVGSSRSLDHDQELDSILVGPVPVGVNKFVFSADPPSAEL 84 (155)
T ss_dssp EEEEEEECCCTTSSCTTEEEEEEEECSCCSEEEEEEEEECCCCGGG
T ss_pred cEEEEEEEeCCCcccCceEeeEEEeccccceeEEEEEEcCCCCccc
Confidence 4788888876654 66789999888876433333
Done!