BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy15856
(118 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1FR8|A Chain A, Crystal Structure Of The Bovine Beta 1,4
Galactosyltransferase (B4galt1) Catalytic Domain
Complexed With Uridine Diphosphogalactose
pdb|1FR8|B Chain B, Crystal Structure Of The Bovine Beta 1,4
Galactosyltransferase (B4galt1) Catalytic Domain
Complexed With Uridine Diphosphogalactose
Length = 288
Score = 90.1 bits (222), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 55/84 (65%)
Query: 4 CPPMPRHLSVAVDSLGYKLPYNNLVGGVFIIRTEHFLRVNGYSNLYWGWGGEDDDMGFRV 63
C PRH+SVA+D G+ LPY GGV + + FL +NG+ N YWGWGGEDDD+ R+
Sbjct: 152 CFSQPRHISVAMDKFGFSLPYVQYFGGVSALSKQQFLSINGFPNNYWGWGGEDDDIYNRL 211
Query: 64 LQLGLKITRPLPQLGRYKMMKHHK 87
G+ ++RP +G+ +M++H +
Sbjct: 212 AFRGMSVSRPNAVIGKCRMIRHSR 235
>pdb|1FGX|A Chain A, Crystal Structure Of The Bovine Beta 1,4
Galactosyltransferase (B4galt1) Catalytic Domain
Complexed With Ump
pdb|1FGX|B Chain B, Crystal Structure Of The Bovine Beta 1,4
Galactosyltransferase (B4galt1) Catalytic Domain
Complexed With Ump
Length = 288
Score = 90.1 bits (222), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 55/84 (65%)
Query: 4 CPPMPRHLSVAVDSLGYKLPYNNLVGGVFIIRTEHFLRVNGYSNLYWGWGGEDDDMGFRV 63
C PRH+SVA+D G+ LPY GGV + + FL +NG+ N YWGWGGEDDD+ R+
Sbjct: 152 CFSQPRHISVAMDKFGFSLPYVQYFGGVSALSKQQFLSINGFPNNYWGWGGEDDDIYNRL 211
Query: 64 LQLGLKITRPLPQLGRYKMMKHHK 87
G+ ++RP +G+ +M++H +
Sbjct: 212 AFRGMSVSRPNAVIGKCRMIRHSR 235
>pdb|1NMM|B Chain B, Beta-1,4-Galactosyltransferase Mutant Cys342thr Complex
With Alpha- Lactalbumin And Glcnac
pdb|1NMM|D Chain D, Beta-1,4-Galactosyltransferase Mutant Cys342thr Complex
With Alpha- Lactalbumin And Glcnac
pdb|1O0R|A Chain A, Crystal Structure Of The Catalytic Domain Of Bovine
Beta1,4- Galactosyltransferase Complex With
Udp-Galactose
pdb|1O0R|B Chain B, Crystal Structure Of The Catalytic Domain Of Bovine
Beta1,4- Galactosyltransferase Complex With
Udp-Galactose
Length = 286
Score = 90.1 bits (222), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 55/84 (65%)
Query: 4 CPPMPRHLSVAVDSLGYKLPYNNLVGGVFIIRTEHFLRVNGYSNLYWGWGGEDDDMGFRV 63
C PRH+SVA+D G+ LPY GGV + + FL +NG+ N YWGWGGEDDD+ R+
Sbjct: 150 CFSQPRHISVAMDKFGFSLPYVQYFGGVSALSKQQFLSINGFPNNYWGWGGEDDDIYNRL 209
Query: 64 LQLGLKITRPLPQLGRYKMMKHHK 87
G+ ++RP +G+ +M++H +
Sbjct: 210 AFRGMSVSRPNAVIGKTRMIRHSR 233
>pdb|1YRO|B Chain B, Crystal Structure Of Beta14,-Galactosyltransferase Mutant
Arg228lys In Complex With Alpha-Lactalbumin In The
Presence Of Udp-Galactose And Mn
pdb|1YRO|D Chain D, Crystal Structure Of Beta14,-Galactosyltransferase Mutant
Arg228lys In Complex With Alpha-Lactalbumin In The
Presence Of Udp-Galactose And Mn
Length = 286
Score = 90.1 bits (222), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 55/84 (65%)
Query: 4 CPPMPRHLSVAVDSLGYKLPYNNLVGGVFIIRTEHFLRVNGYSNLYWGWGGEDDDMGFRV 63
C PRH+SVA+D G+ LPY GGV + + FL +NG+ N YWGWGGEDDD+ R+
Sbjct: 150 CFSQPRHISVAMDKFGFSLPYVQYFGGVSALSKQQFLSINGFPNNYWGWGGEDDDIYNRL 209
Query: 64 LQLGLKITRPLPQLGRYKMMKHHK 87
G+ ++RP +G+ +M++H +
Sbjct: 210 AFRGMSVSRPNAVIGKTRMIRHSR 233
>pdb|1NF5|B Chain B, Crystal Structure Of Lactose Synthase, Complex With
Glucose
pdb|1NF5|D Chain D, Crystal Structure Of Lactose Synthase, Complex With
Glucose
pdb|1NKH|B Chain B, Crystal Structure Of Lactose Synthase Complex With Udp And
Manganese
pdb|1NKH|D Chain D, Crystal Structure Of Lactose Synthase Complex With Udp And
Manganese
pdb|1NQI|B Chain B, Crystal Structure Of Lactose Synthase, A 1:1 Complex
Between Beta1,4- Galactosyltransferase And
Alpha-Lactalbumin In The Presence Of Glcnac
pdb|1NQI|D Chain D, Crystal Structure Of Lactose Synthase, A 1:1 Complex
Between Beta1,4- Galactosyltransferase And
Alpha-Lactalbumin In The Presence Of Glcnac
pdb|1NWG|B Chain B, Beta-1,4-Galactosyltransferase Complex With Alpha-
Lactalbumin And N-Butanoyl-Glucoamine
pdb|1NWG|D Chain D, Beta-1,4-Galactosyltransferase Complex With Alpha-
Lactalbumin And N-Butanoyl-Glucoamine
pdb|1O23|B Chain B, Crystal Structure Of Lactose Synthase In The Presence Of
Udp-glucose
pdb|1O23|D Chain D, Crystal Structure Of Lactose Synthase In The Presence Of
Udp-glucose
pdb|1OQM|B Chain B, A 1:1 Complex Between Alpha-Lactalbumin And Beta1,4-
Galactosyltransferase In The Presence Of Udp-N-Acetyl-
Galactosamine
pdb|1OQM|D Chain D, A 1:1 Complex Between Alpha-Lactalbumin And Beta1,4-
Galactosyltransferase In The Presence Of Udp-N-Acetyl-
Galactosamine
Length = 286
Score = 90.1 bits (222), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 55/84 (65%)
Query: 4 CPPMPRHLSVAVDSLGYKLPYNNLVGGVFIIRTEHFLRVNGYSNLYWGWGGEDDDMGFRV 63
C PRH+SVA+D G+ LPY GGV + + FL +NG+ N YWGWGGEDDD+ R+
Sbjct: 150 CFSQPRHISVAMDKFGFSLPYVQYFGGVSALSKQQFLSINGFPNNYWGWGGEDDDIYNRL 209
Query: 64 LQLGLKITRPLPQLGRYKMMKHHK 87
G+ ++RP +G+ +M++H +
Sbjct: 210 AFRGMSVSRPNAVIGKCRMIRHSR 233
>pdb|1TVY|A Chain A, Beta-1,4-Galactosyltransferase Mutant Met344his
(M344h-Gal- T1) Complex With Udp-Galactose And Manganese
pdb|1TVY|B Chain B, Beta-1,4-Galactosyltransferase Mutant Met344his
(M344h-Gal- T1) Complex With Udp-Galactose And Manganese
pdb|1TW1|A Chain A, Beta-1,4-galactosyltransferase Mutant Met344his
(m344h-gal- T1) Complex With Udp-galactose And Magnesium
pdb|1TW1|B Chain B, Beta-1,4-galactosyltransferase Mutant Met344his
(m344h-gal- T1) Complex With Udp-galactose And Magnesium
pdb|1TW5|A Chain A, Beta1,4-Galactosyltransferase Mutant M344h-Gal-T1 In
Complex With Chitobiose
pdb|1TW5|B Chain B, Beta1,4-Galactosyltransferase Mutant M344h-Gal-T1 In
Complex With Chitobiose
pdb|2FYC|B Chain B, Crystal Structure Of The Catalytic Domain Of Bovine
Beta1,4- Galactosyltransferase-I In Complex With
Alpha-Lactalbumin, Ca And Udp-Galactose
pdb|2FYC|D Chain D, Crystal Structure Of The Catalytic Domain Of Bovine
Beta1,4- Galactosyltransferase-I In Complex With
Alpha-Lactalbumin, Ca And Udp-Galactose
Length = 286
Score = 87.4 bits (215), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 54/84 (64%)
Query: 4 CPPMPRHLSVAVDSLGYKLPYNNLVGGVFIIRTEHFLRVNGYSNLYWGWGGEDDDMGFRV 63
C PRH+SVA+D G+ LPY GGV + + FL +NG+ N YWGWGGEDDD+ R+
Sbjct: 150 CFSQPRHISVAMDKFGFSLPYVQYFGGVSALSKQQFLSINGFPNNYWGWGGEDDDIYNRL 209
Query: 64 LQLGLKITRPLPQLGRYKMMKHHK 87
G+ ++RP +G+ + ++H +
Sbjct: 210 AFRGMSVSRPNAVIGKTRHIRHSR 233
>pdb|2AE7|A Chain A, Crystal Structure Of Human
M340h-Beta1,4-Galactosyltransferase-I (M340h-B4gal-T1)
In Complex With Pentasaccharide
pdb|2AE7|B Chain B, Crystal Structure Of Human
M340h-Beta1,4-Galactosyltransferase-I (M340h-B4gal-T1)
In Complex With Pentasaccharide
pdb|2AE7|C Chain C, Crystal Structure Of Human
M340h-Beta1,4-Galactosyltransferase-I (M340h-B4gal-T1)
In Complex With Pentasaccharide
pdb|2AEC|A Chain A, Crystal Structure Of Human
M340h-Beta1,4-Galactosyltransferase-I (M340h-B4gal-T1)
In Complex With Glcnac-Beta1,2-Man-Alpha1,6-Man- Beta-Or
pdb|2AEC|B Chain B, Crystal Structure Of Human
M340h-Beta1,4-Galactosyltransferase-I (M340h-B4gal-T1)
In Complex With Glcnac-Beta1,2-Man-Alpha1,6-Man- Beta-Or
pdb|2AEC|C Chain C, Crystal Structure Of Human
M340h-Beta1,4-Galactosyltransferase-I (M340h-B4gal-T1)
In Complex With Glcnac-Beta1,2-Man-Alpha1,6-Man- Beta-Or
pdb|2AES|A Chain A, Crystal Structure Of Human
M340h-Beta1,4-Galactosyltransferase-I (M340h-B4gal-T1)
In Complex With Glcnac-Beta1,2-Man-Alpha1,3-Man- Beta-Or
pdb|2AES|B Chain B, Crystal Structure Of Human
M340h-Beta1,4-Galactosyltransferase-I (M340h-B4gal-T1)
In Complex With Glcnac-Beta1,2-Man-Alpha1,3-Man- Beta-Or
pdb|2AES|C Chain C, Crystal Structure Of Human
M340h-Beta1,4-Galactosyltransferase-I (M340h-B4gal-T1)
In Complex With Glcnac-Beta1,2-Man-Alpha1,3-Man- Beta-Or
pdb|2AGD|A Chain A, Crystal Structure Of Human
M340h-Beta-1,4-Galactosyltransferase- I(M340h-B4gal-T1)
In Complex With Glcnac-Beta1,4-Man-Alpha1,3-Man- Beta-Or
pdb|2AGD|B Chain B, Crystal Structure Of Human
M340h-Beta-1,4-Galactosyltransferase- I(M340h-B4gal-T1)
In Complex With Glcnac-Beta1,4-Man-Alpha1,3-Man- Beta-Or
pdb|2AGD|C Chain C, Crystal Structure Of Human
M340h-Beta-1,4-Galactosyltransferase- I(M340h-B4gal-T1)
In Complex With Glcnac-Beta1,4-Man-Alpha1,3-Man- Beta-Or
pdb|2AH9|A Chain A, Crystal Structure Of Human
M340h-Beta-1,4-Galactosyltransferase-I (M340h-B4gal-T1)
In Complex With Chitotriose
pdb|2AH9|B Chain B, Crystal Structure Of Human
M340h-Beta-1,4-Galactosyltransferase-I (M340h-B4gal-T1)
In Complex With Chitotriose
pdb|2AH9|C Chain C, Crystal Structure Of Human
M340h-Beta-1,4-Galactosyltransferase-I (M340h-B4gal-T1)
In Complex With Chitotriose
pdb|2FY7|A Chain A, Crystal Structure Of The Catalytic Domain Of The Human
Beta1,4-galactosyltransferase Mutant M339h In Apo Form
pdb|2FYA|A Chain A, Crystal Structure Of The Catalytic Domain Of The Human
Beta1, 4-Galactosyltransferase Mutant M339h Complex With
Manganese
pdb|2FYB|A Chain A, Crystal Structure Of The Catalytic Domain Of The Human
Beta1,4-Galactosyltransferase Mutant M339h In Complex
With Mn And Udp-Galactose In Open Conformation
pdb|3EE5|A Chain A, Crystal Structure Of Human
M340h-Beta1,4-Galactosyltransferase-I (M340h-B4gal-T1)
In Complex With Glcnac-Beta1,3-Gal-Beta-
Naphthalenemethanol
pdb|3EE5|B Chain B, Crystal Structure Of Human
M340h-Beta1,4-Galactosyltransferase-I (M340h-B4gal-T1)
In Complex With Glcnac-Beta1,3-Gal-Beta-
Naphthalenemethanol
pdb|3EE5|C Chain C, Crystal Structure Of Human
M340h-Beta1,4-Galactosyltransferase-I (M340h-B4gal-T1)
In Complex With Glcnac-Beta1,3-Gal-Beta-
Naphthalenemethanol
pdb|4EE3|A Chain A, Crystal Structure Of Human
M340h-Beta-1,4-Galactosyltransferase-1 (M340h-B4gal-T1)
In Complex With Pentasaccharide
pdb|4EE3|B Chain B, Crystal Structure Of Human
M340h-Beta-1,4-Galactosyltransferase-1 (M340h-B4gal-T1)
In Complex With Pentasaccharide
pdb|4EE3|C Chain C, Crystal Structure Of Human
M340h-Beta-1,4-Galactosyltransferase-1 (M340h-B4gal-T1)
In Complex With Pentasaccharide
pdb|4EE4|A Chain A, Crystal Structure Of Human
M340h-Beta-1,4-Galactosyltransferase-1 (M340h-B4gal-T1)
In Complex With Tetrasaccharide From Lacto-N- Neohexose
pdb|4EE4|B Chain B, Crystal Structure Of Human
M340h-Beta-1,4-Galactosyltransferase-1 (M340h-B4gal-T1)
In Complex With Tetrasaccharide From Lacto-N- Neohexose
pdb|4EE4|C Chain C, Crystal Structure Of Human
M340h-Beta-1,4-Galactosyltransferase-1 (M340h-B4gal-T1)
In Complex With Tetrasaccharide From Lacto-N- Neohexose
pdb|4EE5|A Chain A, Crystal Structure Of Human
M340h-Beta-1,4-Galactosyltransferase-1 (M340h-B4gal-T1)
In Complex With Trisaccharide From Lacto-N- Neotetraose
pdb|4EE5|B Chain B, Crystal Structure Of Human
M340h-Beta-1,4-Galactosyltransferase-1 (M340h-B4gal-T1)
In Complex With Trisaccharide From Lacto-N- Neotetraose
pdb|4EE5|C Chain C, Crystal Structure Of Human
M340h-Beta-1,4-Galactosyltransferase-1 (M340h-B4gal-T1)
In Complex With Trisaccharide From Lacto-N- Neotetraose
pdb|4EEA|A Chain A, Crystal Structure Of Human
M340h-Beta-1,4-Galactosyltransferase-1 (M340h-B4gal-T1)
In Complex With Glcnac-Beta1,6-Gal-Beta1,4-Glc-Beta
pdb|4EEA|B Chain B, Crystal Structure Of Human
M340h-Beta-1,4-Galactosyltransferase-1 (M340h-B4gal-T1)
In Complex With Glcnac-Beta1,6-Gal-Beta1,4-Glc-Beta
pdb|4EEA|C Chain C, Crystal Structure Of Human
M340h-Beta-1,4-Galactosyltransferase-1 (M340h-B4gal-T1)
In Complex With Glcnac-Beta1,6-Gal-Beta1,4-Glc-Beta
pdb|4EEG|A Chain A, Crystal Structure Of Human
M340h-Beta-1,4-Galactosyltransferase-1 (M340h-B4gal-T1)
In Complex With Glcnac-Beta1,6-Gal-Beta
pdb|4EEG|B Chain B, Crystal Structure Of Human
M340h-Beta-1,4-Galactosyltransferase-1 (M340h-B4gal-T1)
In Complex With Glcnac-Beta1,6-Gal-Beta
pdb|4EEG|C Chain C, Crystal Structure Of Human
M340h-Beta-1,4-Galactosyltransferase-1 (M340h-B4gal-T1)
In Complex With Glcnac-Beta1,6-Gal-Beta
pdb|4EEM|A Chain A, Crystal Structure Of Human
M340h-Beta-1,4-Galactosyltransferase-1 (M340h-B4gal-T1)
In Complex With Glcnac-Beta1,6-Man-Alpha-Methyl
pdb|4EEM|B Chain B, Crystal Structure Of Human
M340h-Beta-1,4-Galactosyltransferase-1 (M340h-B4gal-T1)
In Complex With Glcnac-Beta1,6-Man-Alpha-Methyl
pdb|4EEM|C Chain C, Crystal Structure Of Human
M340h-Beta-1,4-Galactosyltransferase-1 (M340h-B4gal-T1)
In Complex With Glcnac-Beta1,6-Man-Alpha-Methyl
pdb|4EEO|A Chain A, Crystal Structure Of Human
M340h-Beta-1,4-Galactosyltransferase-1 (M340h-B4gal-T1)
In Complex With Glcnac-Beta1,6-Glcnac-Alpha-Benzyl
pdb|4EEO|B Chain B, Crystal Structure Of Human
M340h-Beta-1,4-Galactosyltransferase-1 (M340h-B4gal-T1)
In Complex With Glcnac-Beta1,6-Glcnac-Alpha-Benzyl
pdb|4EEO|C Chain C, Crystal Structure Of Human
M340h-Beta-1,4-Galactosyltransferase-1 (M340h-B4gal-T1)
In Complex With Glcnac-Beta1,6-Glcnac-Alpha-Benzyl
Length = 287
Score = 87.4 bits (215), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 54/84 (64%)
Query: 4 CPPMPRHLSVAVDSLGYKLPYNNLVGGVFIIRTEHFLRVNGYSNLYWGWGGEDDDMGFRV 63
C PRH+SVA+D G+ LPY GGV + + FL +NG+ N YWGWGGEDDD+ R+
Sbjct: 151 CFSQPRHISVAMDKFGFSLPYVQYFGGVSALSKQQFLTINGFPNNYWGWGGEDDDIFNRL 210
Query: 64 LQLGLKITRPLPQLGRYKMMKHHK 87
+ G+ I+RP +G + ++H +
Sbjct: 211 VFRGMSISRPNAVVGTTRHIRHSR 234
>pdb|1NHE|B Chain B, Crystal Structure Of Lactose Synthase Complex With Udp
pdb|1NHE|D Chain D, Crystal Structure Of Lactose Synthase Complex With Udp
Length = 286
Score = 86.3 bits (212), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 52/84 (61%)
Query: 4 CPPMPRHLSVAVDSLGYKLPYNNLVGGVFIIRTEHFLRVNGYSNLYWGWGGEDDDMGFRV 63
C PRH+SVA D G+ LPY GGV + + FL +NG+ N YWGWGGEDDD+ R+
Sbjct: 150 CFSQPRHISVAXDKFGFSLPYVQYFGGVSALSKQQFLSINGFPNNYWGWGGEDDDIYNRL 209
Query: 64 LQLGLKITRPLPQLGRYKMMKHHK 87
G ++RP +G+ + ++H +
Sbjct: 210 AFRGXSVSRPNAVIGKCRXIRHSR 233
>pdb|2FYD|B Chain B, Catalytic Domain Of Bovine Beta 1, 4-Galactosyltransferase
In Complex With Alpha-Lactalbumin, Glucose, Mn, And
Udp-N- Acetylgalactosamine
pdb|2FYD|D Chain D, Catalytic Domain Of Bovine Beta 1, 4-Galactosyltransferase
In Complex With Alpha-Lactalbumin, Glucose, Mn, And
Udp-N- Acetylgalactosamine
Length = 286
Score = 85.9 bits (211), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 54/84 (64%)
Query: 4 CPPMPRHLSVAVDSLGYKLPYNNLVGGVFIIRTEHFLRVNGYSNLYWGWGGEDDDMGFRV 63
C PRH+SVA+D G+ LPY GGV + + FL +NG+ N Y GWGGEDDD+ R+
Sbjct: 150 CFSQPRHISVAMDKFGFSLPYVQYFGGVSALSKQQFLSINGFPNNYCGWGGEDDDIYNRL 209
Query: 64 LQLGLKITRPLPQLGRYKMMKHHK 87
G+ ++RP +G+ +M++H +
Sbjct: 210 AFRGMSVSRPNAVIGKTRMIRHSR 233
>pdb|1PZY|B Chain B, W314a-Beta1,4-Galactosyltransferase-I Complexed With
Alpha-Lactalbumin In The Presence Of
N-Acetylglucosamine, Udp And Manganese
pdb|1PZY|D Chain D, W314a-Beta1,4-Galactosyltransferase-I Complexed With
Alpha-Lactalbumin In The Presence Of
N-Acetylglucosamine, Udp And Manganese
pdb|1PZT|A Chain A, Crystal Structure Of W314a-beta-1,4-galactosyltransferase
(b4gal-t1) Catalytic Domain Without Substrate
Length = 286
Score = 85.9 bits (211), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 54/84 (64%)
Query: 4 CPPMPRHLSVAVDSLGYKLPYNNLVGGVFIIRTEHFLRVNGYSNLYWGWGGEDDDMGFRV 63
C PRH+SVA+D G+ LPY GGV + + FL +NG+ N YWG GGEDDD+ R+
Sbjct: 150 CFSQPRHISVAMDKFGFSLPYVQYFGGVSALSKQQFLSINGFPNNYWGAGGEDDDIYNRL 209
Query: 64 LQLGLKITRPLPQLGRYKMMKHHK 87
G+ ++RP +G+ +M++H +
Sbjct: 210 AFRGMSVSRPNAVIGKTRMIRHSR 233
>pdb|3LW6|A Chain A, Crystal Structure Of Drosophila
Beta1,4-Galactosyltransferas
Length = 287
Score = 70.5 bits (171), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 42/63 (66%)
Query: 11 LSVAVDSLGYKLPYNNLVGGVFIIRTEHFLRVNGYSNLYWGWGGEDDDMGFRVLQLGLKI 70
L +A L K Y+N VGG+ ++R EHF ++NG SN YWGWG EDD+ R+ GL++
Sbjct: 142 LHIAGPKLHPKYHYDNFVGGILLVRREHFKQMNGMSNQYWGWGLEDDEFFVRIRDAGLQV 201
Query: 71 TRP 73
TRP
Sbjct: 202 TRP 204
>pdb|1XHB|A Chain A, The Crystal Structure Of Udp-Galnac: Polypeptide Alpha-N-
Acetylgalactosaminyltransferase-T1
Length = 472
Score = 33.5 bits (75), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 23/41 (56%)
Query: 27 LVGGVFIIRTEHFLRVNGYSNLYWGWGGEDDDMGFRVLQLG 67
+ GG+F I ++F + Y WGGE+ ++ FR+ Q G
Sbjct: 204 MAGGLFSIDRDYFQEIGTYDAGMDIWGGENLEISFRIWQCG 244
>pdb|2FFU|A Chain A, Crystal Structure Of Human Ppgalnact-2 Complexed With Udp
And Ea2
pdb|2FFV|A Chain A, Human Ppgalnact-2 Complexed With Manganese And Udp
pdb|2FFV|B Chain B, Human Ppgalnact-2 Complexed With Manganese And Udp
Length = 501
Score = 33.1 bits (74), Expect = 0.036, Method: Composition-based stats.
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Query: 27 LVGGVFIIRTEHFLRVNGYSNLYWGWGGEDDDMGFRVLQLG--LKITRPLPQLGRYKMMK 84
+ GG+F++ +F + Y + WGGE+ ++ FRV Q G L+I P ++G +
Sbjct: 236 IAGGLFVMDKFYFEELGKYDMMMDVWGGENLEISFRVWQCGGSLEII-PCSRVGHVFRKQ 294
Query: 85 HHKRVP 90
H P
Sbjct: 295 HPYTFP 300
>pdb|2D7I|A Chain A, Crsytal Structure Of Pp-Galnac-T10 With Udp, Galnac And
Mn2+
pdb|2D7R|A Chain A, Crystal Structure Of Pp-galnac-t10 Complexed With
Galnac-ser On Lectin Domain
Length = 570
Score = 32.3 bits (72), Expect = 0.070, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Query: 6 PMPRHLSVAVDSLGYKLPYNNLVGGVFIIRTEHFLRVNGYSNLYWGWGGEDDDMGFRVLQ 65
P+P L A S ++ P + GG+F + + F + GY WGGE ++ F+V
Sbjct: 265 PIPPELQKADPSDPFESPV--MAGGLFAVDRKWFWELGGYDPGLEIWGGEQYEISFKVWM 322
Query: 66 LG 67
G
Sbjct: 323 CG 324
>pdb|2Z87|A Chain A, Crystal Structure Of Chondroitin Polymerase From
Escherichia Coli Strain K4 (K4cp) Complexed With Udp-
Galnac And Udp
pdb|2Z87|B Chain B, Crystal Structure Of Chondroitin Polymerase From
Escherichia Coli Strain K4 (K4cp) Complexed With Udp-
Galnac And Udp
Length = 624
Score = 30.4 bits (67), Expect = 0.24, Method: Composition-based stats.
Identities = 12/45 (26%), Positives = 21/45 (46%)
Query: 23 PYNNLVGGVFIIRTEHFLRVNGYSNLYWGWGGEDDDMGFRVLQLG 67
P+ GG + R + + WGGED++ G+R+ + G
Sbjct: 271 PFRFFSGGNVAFAKKWLFRAGWFDEEFTHWGGEDNEFGYRLYREG 315
>pdb|2Z86|A Chain A, Crystal Structure Of Chondroitin Polymerase From
Escherichia Coli Strain K4 (K4cp) Complexed With
Udp-Glcua And Udp
pdb|2Z86|B Chain B, Crystal Structure Of Chondroitin Polymerase From
Escherichia Coli Strain K4 (K4cp) Complexed With
Udp-Glcua And Udp
pdb|2Z86|C Chain C, Crystal Structure Of Chondroitin Polymerase From
Escherichia Coli Strain K4 (K4cp) Complexed With
Udp-Glcua And Udp
pdb|2Z86|D Chain D, Crystal Structure Of Chondroitin Polymerase From
Escherichia Coli Strain K4 (K4cp) Complexed With
Udp-Glcua And Udp
Length = 625
Score = 30.4 bits (67), Expect = 0.24, Method: Composition-based stats.
Identities = 12/45 (26%), Positives = 21/45 (46%)
Query: 23 PYNNLVGGVFIIRTEHFLRVNGYSNLYWGWGGEDDDMGFRVLQLG 67
P+ GG + R + + WGGED++ G+R+ + G
Sbjct: 272 PFRFFSGGNVAFAKKWLFRAGWFDEEFTHWGGEDNEFGYRLYREG 316
>pdb|3N2T|A Chain A, Structure Of The Glycerol Dehydrogenase Akr11b4 From
Gluconobacter Oxydans
Length = 348
Score = 27.7 bits (60), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 10/19 (52%), Positives = 11/19 (57%)
Query: 50 WGWGGEDDDMGFRVLQLGL 68
W WGG DDD G R + L
Sbjct: 44 WMWGGPDDDNGVRTIHAAL 62
>pdb|2YDM|A Chain A, Structural Characterization Of Angiotensin-I Converting
Enzyme In Complex With A Selenium Analogue Of Captopril
Length = 589
Score = 25.8 bits (55), Expect = 6.0, Method: Composition-based stats.
Identities = 12/35 (34%), Positives = 15/35 (42%)
Query: 45 YSNLYWGWGGEDDDMGFRVLQLGLKITRPLPQLGR 79
Y +L W W G D G +LQ K + Q R
Sbjct: 139 YEDLLWAWEGWRDKAGRAILQFYPKYVELINQAAR 173
>pdb|2XY9|A Chain A, Human Angiotensin Converting Enzyme In Complex With
Phosphinic Tripeptide
Length = 585
Score = 25.8 bits (55), Expect = 6.1, Method: Composition-based stats.
Identities = 12/35 (34%), Positives = 15/35 (42%)
Query: 45 YSNLYWGWGGEDDDMGFRVLQLGLKITRPLPQLGR 79
Y +L W W G D G +LQ K + Q R
Sbjct: 136 YEDLLWAWEGWRDKAGRAILQFYPKYVELINQAAR 170
>pdb|2IUX|A Chain A, Human Tace Mutant G1234
Length = 591
Score = 25.8 bits (55), Expect = 6.1, Method: Composition-based stats.
Identities = 12/35 (34%), Positives = 15/35 (42%)
Query: 45 YSNLYWGWGGEDDDMGFRVLQLGLKITRPLPQLGR 79
Y +L W W G D G +LQ K + Q R
Sbjct: 139 YEDLLWAWEGWRDKAGRAILQFYPKYVELINQAAR 173
>pdb|2IUL|A Chain A, Human Tace G13 Mutant
Length = 591
Score = 25.8 bits (55), Expect = 6.1, Method: Composition-based stats.
Identities = 12/35 (34%), Positives = 15/35 (42%)
Query: 45 YSNLYWGWGGEDDDMGFRVLQLGLKITRPLPQLGR 79
Y +L W W G D G +LQ K + Q R
Sbjct: 139 YEDLLWAWEGWRDKAGRAILQFYPKYVELINQAAR 173
>pdb|3BKK|A Chain A, Tesis Ace Co-Crystal Structure With Ketone Ace Inhibitor
Kaf
pdb|3BKL|A Chain A, Testis Ace Co-Crystal Structure With Ketone Ace Inhibitor
Kaw
pdb|3L3N|A Chain A, Testis Ace Co-Crystal Structure With Novel Inhibitor Lisw
Length = 591
Score = 25.8 bits (55), Expect = 6.2, Method: Composition-based stats.
Identities = 12/35 (34%), Positives = 15/35 (42%)
Query: 45 YSNLYWGWGGEDDDMGFRVLQLGLKITRPLPQLGR 79
Y +L W W G D G +LQ K + Q R
Sbjct: 139 YEDLLWAWEGWRDKAGRAILQFYPKYVELINQAAR 173
>pdb|2OC2|A Chain A, Structure Of Testis Ace With Rxpa380
Length = 591
Score = 25.8 bits (55), Expect = 6.2, Method: Composition-based stats.
Identities = 12/35 (34%), Positives = 15/35 (42%)
Query: 45 YSNLYWGWGGEDDDMGFRVLQLGLKITRPLPQLGR 79
Y +L W W G D G +LQ K + Q R
Sbjct: 139 YEDLLWAWEGWRDKAGRAILQFYPKYVELINQAAR 173
>pdb|1O8A|A Chain A, Crystal Structure Of Human Angiotensin Converting Enzyme
(Native).
pdb|1UZF|A Chain A, Complex Of The Anti-Hypertensive Drug Captopril An The
Human Testicular Angiotensin I-Converting Enzyme
pdb|4APH|A Chain A, Human Angiotensin-Converting Enzyme In Complex With
Angiotensin-Ii
pdb|4APJ|A Chain A, Human Angiotensin-Converting Enzyme In Complex With Bppb
pdb|1O86|A Chain A, Crystal Structure Of Human Angiotensin Converting Enzyme
In Complex With Lisinopril.
pdb|1UZE|A Chain A, Complex Of The Anti-hypertensive Drug Enalaprilat And The
Human Testicular Angiotensin I-converting Enzyme
Length = 589
Score = 25.8 bits (55), Expect = 6.2, Method: Composition-based stats.
Identities = 12/35 (34%), Positives = 15/35 (42%)
Query: 45 YSNLYWGWGGEDDDMGFRVLQLGLKITRPLPQLGR 79
Y +L W W G D G +LQ K + Q R
Sbjct: 139 YEDLLWAWEGWRDKAGRAILQFYPKYVELINQAAR 173
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.325 0.144 0.452
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,669,181
Number of Sequences: 62578
Number of extensions: 139190
Number of successful extensions: 357
Number of sequences better than 100.0: 26
Number of HSP's better than 100.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 333
Number of HSP's gapped (non-prelim): 26
length of query: 118
length of database: 14,973,337
effective HSP length: 81
effective length of query: 37
effective length of database: 9,904,519
effective search space: 366467203
effective search space used: 366467203
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 45 (21.9 bits)