Query psy15857
Match_columns 455
No_of_seqs 350 out of 1511
Neff 6.4
Searched_HMMs 29240
Date Fri Aug 16 23:09:09 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy15857.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/15857hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3sir_A Caspase; hydrolase; 2.6 100.0 2.6E-54 9E-59 423.4 13.1 208 8-215 4-222 (259)
2 3od5_A Caspase-6; caspase doma 100.0 9E-54 3.1E-58 423.5 16.9 209 7-215 4-233 (278)
3 1m72_A Caspase-1; caspase, cys 100.0 2.5E-53 8.7E-58 419.1 17.7 211 5-215 13-232 (272)
4 3h11_B Caspase-8; cell death, 100.0 4E-53 1.4E-57 417.4 17.5 216 12-227 5-250 (271)
5 2nn3_C Caspase-1; cysteine pro 100.0 6.8E-53 2.3E-57 422.2 17.1 211 5-215 41-260 (310)
6 1nw9_B Caspase 9, apoptosis-re 100.0 4.2E-52 1.4E-56 411.6 18.6 220 11-230 8-267 (277)
7 4ehd_A Caspase-3; caspase, apo 100.0 5.1E-52 1.7E-56 410.4 17.4 203 12-215 32-243 (277)
8 2j32_A Caspase-3; Pro-caspase3 100.0 1.3E-51 4.4E-56 402.4 15.0 201 14-215 6-215 (250)
9 2fp3_A Caspase NC; apoptosis, 100.0 1.8E-50 6.1E-55 406.4 17.6 205 10-215 46-283 (316)
10 1f1j_A Caspase-7 protease; cas 100.0 3.7E-50 1.3E-54 401.9 15.8 204 12-215 57-271 (305)
11 3e4c_A Caspase-1; zymogen, inf 100.0 1.7E-49 5.9E-54 396.8 16.7 220 7-228 41-288 (302)
12 3h11_A CAsp8 and FADD-like apo 100.0 5.8E-48 2E-52 380.4 12.7 195 6-215 25-242 (272)
13 3p45_A Caspase-6; protease, hu 100.0 1.6E-44 5.6E-49 334.0 14.9 148 6-153 26-174 (179)
14 2dko_A Caspase-3; low barrier 100.0 3.2E-44 1.1E-48 323.0 15.0 140 13-152 5-145 (146)
15 2ql9_A Caspase-7; cysteine pro 100.0 2.6E-43 9E-48 324.7 14.0 142 10-151 30-172 (173)
16 1qtn_A Caspase-8; apoptosis, d 100.0 3.8E-43 1.3E-47 321.8 14.2 144 10-153 9-161 (164)
17 1pyo_A Caspase-2; apoptosis, c 100.0 1.3E-42 4.4E-47 319.1 15.6 141 13-153 22-165 (167)
18 2h54_A Caspase-1; allosteric s 100.0 5.7E-38 2E-42 291.1 15.4 139 8-148 25-172 (178)
19 3uoa_B Mucosa-associated lymph 100.0 2.7E-29 9.1E-34 257.6 16.1 187 23-227 4-213 (390)
20 3p45_A Caspase-6; protease, hu 99.9 2.2E-26 7.4E-31 212.8 6.6 133 278-425 24-157 (179)
21 2dko_A Caspase-3; low barrier 99.9 1.2E-24 4.1E-29 195.5 5.2 123 288-425 6-129 (146)
22 1qtn_A Caspase-8; apoptosis, d 99.9 2.7E-24 9.4E-29 196.7 4.6 125 287-425 12-144 (164)
23 2ql9_A Caspase-7; cysteine pro 99.9 4.1E-24 1.4E-28 196.8 5.1 123 288-425 34-157 (173)
24 2nn3_C Caspase-1; cysteine pro 99.9 5.4E-24 1.9E-28 213.0 6.0 140 258-413 22-161 (310)
25 1pyo_A Caspase-2; apoptosis, c 99.9 1.4E-23 4.8E-28 192.5 6.9 125 287-425 22-148 (167)
26 3od5_A Caspase-6; caspase doma 99.9 4.7E-23 1.6E-27 203.6 6.7 121 280-414 3-124 (278)
27 3sir_A Caspase; hydrolase; 2.6 99.9 7.9E-23 2.7E-27 200.1 6.6 119 282-414 4-122 (259)
28 1m72_A Caspase-1; caspase, cys 99.9 2E-22 6.7E-27 198.6 6.7 124 277-414 11-134 (272)
29 3h11_B Caspase-8; cell death, 99.8 4.5E-22 1.5E-26 195.9 5.9 114 288-414 7-128 (271)
30 1nw9_B Caspase 9, apoptosis-re 99.8 3.6E-21 1.2E-25 190.0 6.3 113 289-414 12-132 (277)
31 4ehd_A Caspase-3; caspase, apo 99.8 3.8E-21 1.3E-25 189.7 5.7 113 288-414 34-147 (277)
32 2h54_A Caspase-1; allosteric s 99.8 1.2E-20 4.1E-25 174.7 7.8 131 279-424 22-159 (178)
33 2j32_A Caspase-3; Pro-caspase3 99.8 3.4E-20 1.2E-24 180.5 5.6 110 289-412 7-117 (250)
34 1f1j_A Caspase-7 protease; cas 99.8 4E-20 1.4E-24 184.8 5.5 113 288-414 59-172 (305)
35 2fp3_A Caspase NC; apoptosis, 99.8 4.1E-20 1.4E-24 185.6 5.5 115 285-413 47-167 (316)
36 3e4c_A Caspase-1; zymogen, inf 99.7 2.3E-18 7.9E-23 171.8 5.9 115 284-412 44-165 (302)
37 3h11_A CAsp8 and FADD-like apo 99.7 3.3E-18 1.1E-22 168.3 4.0 109 280-414 25-136 (272)
38 3bij_A Uncharacterized protein 99.4 4E-13 1.4E-17 132.8 11.3 200 23-231 2-263 (285)
39 1sc3_B Interleukin-1 beta conv 99.1 2.3E-11 7.9E-16 99.8 4.5 51 165-215 3-61 (88)
40 1pyo_B Caspase-2; apoptosis, c 99.0 5.7E-11 2E-15 100.6 2.5 40 163-202 7-50 (105)
41 2ql9_B Caspase-7; cysteine pro 99.0 1.5E-10 5.1E-15 96.6 3.6 40 163-202 3-46 (97)
42 2dko_B Caspase-3; low barrier 99.0 2E-10 6.9E-15 96.9 4.0 40 163-202 9-52 (103)
43 1qtn_B Caspase-8; apoptosis, d 99.0 2.2E-10 7.4E-15 95.3 4.1 39 164-202 6-48 (95)
44 3rjm_B Caspase-2; caspase-2, c 99.0 2.6E-10 8.8E-15 98.4 4.1 54 163-216 8-69 (117)
45 2xzd_B Caspase-3; hydrolase-pr 98.9 2.7E-10 9.3E-15 98.4 3.2 40 163-202 8-51 (118)
46 4af8_A Metacaspase MCA2; hydro 98.8 1.2E-07 4.1E-12 96.5 18.0 161 21-187 89-286 (367)
47 3uoa_B Mucosa-associated lymph 98.6 9.9E-08 3.4E-12 97.9 10.4 106 296-417 3-119 (390)
48 4f6o_A Metacaspase-1; rossmann 98.6 4.7E-07 1.6E-11 91.7 13.1 117 22-145 51-197 (350)
49 3bij_A Uncharacterized protein 95.6 0.047 1.6E-06 53.3 9.6 74 376-449 2-86 (285)
50 4f6o_A Metacaspase-1; rossmann 91.6 0.76 2.6E-05 46.2 9.9 73 375-449 51-140 (350)
51 4af8_A Metacaspase MCA2; hydro 89.9 1.7 5.6E-05 44.1 10.6 73 375-449 90-180 (367)
52 3s40_A Diacylglycerol kinase; 45.5 49 0.0017 31.7 7.6 80 46-147 24-103 (304)
53 2hjv_A ATP-dependent RNA helic 43.2 1.5E+02 0.0051 25.0 9.7 49 24-85 35-84 (163)
54 2rb4_A ATP-dependent RNA helic 42.1 1.1E+02 0.0038 26.1 8.8 50 23-85 33-83 (175)
55 1t5i_A C_terminal domain of A 37.6 1.9E+02 0.0066 24.6 10.0 49 24-85 31-80 (172)
56 1fuk_A Eukaryotic initiation f 37.5 1.2E+02 0.0039 25.7 8.0 50 23-85 29-79 (165)
57 4es1_A BH0342 protein; ferredo 34.7 1.1E+02 0.0037 24.8 6.8 69 48-116 22-95 (100)
58 3h1t_A Type I site-specific re 34.7 1.6E+02 0.0056 30.4 10.1 105 23-143 438-559 (590)
59 3grc_A Sensor protein, kinase; 31.3 1.9E+02 0.0065 22.7 8.1 23 47-69 16-38 (140)
60 2qv7_A Diacylglycerol kinase D 31.0 1.6E+02 0.0055 28.4 8.7 79 46-145 40-118 (337)
61 4a26_A Putative C-1-tetrahydro 30.8 1.1E+02 0.0036 29.9 7.2 54 22-84 36-92 (300)
62 1zpw_X Hypothetical protein TT 28.8 1.8E+02 0.0063 22.7 7.2 61 47-109 15-78 (90)
63 2i0x_A Hypothetical protein PF 28.6 1.6E+02 0.0054 22.9 6.6 61 48-109 12-76 (85)
64 4a5o_A Bifunctional protein fo 28.3 1.3E+02 0.0043 29.1 7.2 54 22-84 34-90 (286)
65 4b4u_A Bifunctional protein fo 27.6 1.6E+02 0.0054 28.8 7.8 71 22-103 52-127 (303)
66 3eaq_A Heat resistant RNA depe 25.3 90 0.0031 27.9 5.4 50 23-85 30-80 (212)
67 1hqz_1 ABP1P, actin-binding pr 25.1 2.6E+02 0.0088 23.3 8.0 58 72-139 12-69 (141)
68 2z8u_A Tata-box-binding protei 24.9 7.9 0.00027 35.4 -2.0 50 288-338 49-98 (188)
69 3mos_A Transketolase, TK; thia 24.8 1.4E+02 0.0049 31.7 7.6 67 25-99 175-241 (616)
70 2p6n_A ATP-dependent RNA helic 24.7 1.2E+02 0.0041 26.7 6.0 48 25-85 55-103 (191)
71 1mp9_A Tata-binding protein; t 24.0 13 0.00043 34.3 -0.8 124 288-416 49-188 (198)
72 3l07_A Bifunctional protein fo 24.0 1.4E+02 0.0046 28.9 6.5 54 22-84 33-89 (285)
73 2fi0_A Conserved domain protei 23.8 36 0.0012 26.3 2.0 18 322-339 61-78 (81)
74 2lci_A Protein OR36; structura 22.3 1.8E+02 0.006 23.6 5.8 46 24-82 51-97 (134)
75 2i4i_A ATP-dependent RNA helic 21.7 2E+02 0.0068 27.7 7.5 50 23-85 275-325 (417)
76 3exc_X Uncharacterized protein 21.4 2.9E+02 0.01 21.7 7.0 63 48-111 16-85 (91)
77 2db3_A ATP-dependent RNA helic 20.4 4.3E+02 0.015 26.0 9.8 40 46-85 309-349 (434)
No 1
>3sir_A Caspase; hydrolase; 2.68A {Drosophila melanogaster} PDB: 3sip_A
Probab=100.00 E-value=2.6e-54 Score=423.38 Aligned_cols=208 Identities=48% Similarity=0.806 Sum_probs=170.3
Q ss_pred ccccCCCCceeCCCCceeEEEEEeCCCCCCCCCCCCCChHHhHHHHHHHHHhCCcEEEEecCCCHHHHHHHHHHHHhhcC
Q psy15857 8 STVEKDADYYRMDHKHRGLALIFNHEHFDSPHLKSRAGTGADFENLYTTLVNLGFVVKPYHDPEFKVIQNAIDEAAEQDY 87 (455)
Q Consensus 8 ~~~~~~~~~Y~m~~~~~G~aLIInN~~F~~~~l~~R~Gs~~D~~~L~~~F~~LGF~V~~~~nlt~~em~~~l~~~s~~d~ 87 (455)
++.++.++.|+|+++++|+||||||.+|....+++|.||++|+++|+++|++|||+|+++.|+|++||.+.|++|++++|
T Consensus 4 ~~~~~~~~~Y~m~~~~rg~aLIInn~~f~~~~l~~R~G~~~D~~~L~~~f~~LGF~V~~~~dlt~~em~~~l~~~~~~~h 83 (259)
T 3sir_A 4 SVTDRHAAEYNMRHKNRGMALIFNHEHFEVPTLKSRAGTNVDCENLTRVLKQLDFEVTVYKDCRYKDILRTIEYSASQNH 83 (259)
T ss_dssp SCCCSSCSBCCCCSSEEEEEEEEEECCC-----------CCHHHHHHHHHHHTTCEEEEEEECSHHHHHHHHHHHHTSCC
T ss_pred CCCCCccCcCCCCCCCccEEEEEeccccCCCCCCCCCCcHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHhhc
Confidence 45788999999999999999999999998656899999999999999999999999999999999999999999998889
Q ss_pred CCCceEEEEEecCCCCceeeeeCCccChhhhHHhhccccccccCCCceEEEEecccCCccCCCceee---eccCCCCCCC
Q psy15857 88 TDADCFVMAVLTHGEDGILHAKDVPYKPKNLWSKFTADNCLTLAGKPKLFFIQACQGDKLDAGVTIR---TQVDGHPSNT 164 (455)
Q Consensus 88 ~~~d~~vvvilSHG~~g~I~g~D~~v~~~~I~~~F~~~~c~~L~gKPKlFfiQACRG~~~d~gv~~~---~~~d~~~~~~ 164 (455)
..+||++|||||||.+|.|||+|+.+++++|+++|++.+||+|+|||||||||||||++.+.|+... .++|+.....
T Consensus 84 ~~~d~~v~~~lsHG~~g~i~~~D~~v~l~~i~~~f~~~~cpsL~gKPKlf~iQACRG~~~~~g~~~~~~~~~~dg~~~~~ 163 (259)
T 3sir_A 84 SDSDCILVAILSHGEMGYIYAKDTQYKLDNIWSFFTANHCPSLAGKPKLFFIQACQGDRLDGGVTMQRSQTETDGDSSMS 163 (259)
T ss_dssp TTEEEEEEEEEECTTCCCCCCTTHHHHHHHTTGGGSTTTCGGGSSSCEEEEEEEETTSCEEC-----------------C
T ss_pred cCCCEEEEEEecCCCCCeEEeCCCcEEHHHHHHHhhhccCccccCCCCEEEEecCCCCcccCCcccccCcccccCccccc
Confidence 9999999999999999999999999999999999999999999999999999999999999887652 2455544456
Q ss_pred cCCCCCCCEEEEEccCCCCccccCc----hhHHHHHHHHhHhH----HHHhhhcccCCC
Q psy15857 165 YSIPLHADFLMAYSTISDSPMFGQR----FGLKDKCSKVVSKT----YQVMSSNVDTSN 215 (455)
Q Consensus 165 ~~iP~~aD~Li~yST~pG~vS~R~~----~fIq~Lc~~~~~~~----~~~m~~~~~~~~ 215 (455)
..+|.++|||++|||+|||+|||++ ||||+||+.|.+.. +..|..+|++.+
T Consensus 164 ~~ip~~aD~Li~yST~pG~vs~r~~~~GS~fiq~L~~~l~~~~~~~dl~~ilt~V~~~V 222 (259)
T 3sir_A 164 YKIPVHADFLIAYSTVPGFYSWRNTTRGSWFMQSLCAELAANGKRLDILTLLTFVCQRV 222 (259)
T ss_dssp EECCCCTTEEEEEEEECCSCCCSSCCCSCHHHHHHHHHHHHHTTTSCHHHHHHHHHHHH
T ss_pred ccCCCCCCEEEEEECCCCeEeecCCCCCcHHHHHHHHHHHhcCCCCCHHHHHHHHHHHH
Confidence 7899999999999999999999986 99999999888753 334555555444
No 2
>3od5_A Caspase-6; caspase domain, apoptotic protease, hydrolase-hydrolase INHI complex; 1.60A {Homo sapiens} SCOP: c.17.1.0 PDB: 3k7e_A 3s70_A 3v6m_A 3v6l_A 3nr2_A 4fxo_A 2wdp_A 3nkf_A 3s8e_A 4ejf_A 3qnw_A* 3p4u_A* 3p45_B 3qnw_B* 3p4u_B*
Probab=100.00 E-value=9e-54 Score=423.49 Aligned_cols=209 Identities=35% Similarity=0.553 Sum_probs=180.3
Q ss_pred cccccCCCCceeCCCCceeEEEEEeCCCCCCC-CCCCCCChHHhHHHHHHHHHhCCcEEEEecCCCHHHHHHHHHHHHhh
Q psy15857 7 KSTVEKDADYYRMDHKHRGLALIFNHEHFDSP-HLKSRAGTGADFENLYTTLVNLGFVVKPYHDPEFKVIQNAIDEAAEQ 85 (455)
Q Consensus 7 ~~~~~~~~~~Y~m~~~~~G~aLIInN~~F~~~-~l~~R~Gs~~D~~~L~~~F~~LGF~V~~~~nlt~~em~~~l~~~s~~ 85 (455)
+++.+..++.|+|+++++|+||||||.+|... .+++|.||++|+++|+++|++|||+|++++|||++||.+.|++|+++
T Consensus 4 ~~~~~~~~~~Y~m~~~~rg~aLIInn~~F~~~~~l~~R~Gt~~D~~~L~~~f~~LGF~V~~~~dlt~~em~~~l~~~~~~ 83 (278)
T 3od5_A 4 KREMFDPAEKYKMDHRRRGIALIFNHERFFWHLTLPERRGTCADRDNLTRRFSDLGFEVKCFNDLKAEELLLKIHEVSTV 83 (278)
T ss_dssp ----CCTTCBCCCCSSBCCEEEEEECCCCCGGGCCCCCTTHHHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHS
T ss_pred ccCCCCcccccCCCCCCcCEEEEEeccccCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhh
Confidence 46778899999999999999999999999853 68999999999999999999999999999999999999999999998
Q ss_pred cCCCCceEEEEEecCCCCceeeeeCCccChhhhHHhhccccccccCCCceEEEEecccCCccCCCceeeec---------
Q psy15857 86 DYTDADCFVMAVLTHGEDGILHAKDVPYKPKNLWSKFTADNCLTLAGKPKLFFIQACQGDKLDAGVTIRTQ--------- 156 (455)
Q Consensus 86 d~~~~d~~vvvilSHG~~g~I~g~D~~v~~~~I~~~F~~~~c~~L~gKPKlFfiQACRG~~~d~gv~~~~~--------- 156 (455)
+|..+|||||||||||.+|.|||+|+.|++++|+++|++.+||+|+|||||||||||||++.+.|+...+.
T Consensus 84 ~h~~~d~~vv~ilSHG~~g~i~g~D~~v~l~~I~~~f~~~~CpsL~gKPKlffiQACRG~~~~~g~~~~~~~~~~~~~l~ 163 (278)
T 3od5_A 84 SHADADCFVCVFLSHGEGNHIYAYDAKIEIQTLTGLFKGDKCHSLVGKPKIFIIQACRGNQHDVPVIPLDVVDNQTEKLD 163 (278)
T ss_dssp CCTTBSCEEEEEESCEETTEEECSSSEEEHHHHHHTTSTTTCGGGTTSCEEEEEESCCSSBCBCEECCC-----------
T ss_pred cccCCCEEEEEEECCCCCCEEEEeCCeEEHHHHHHHhccccChhhcCCCcEEEEecCCCCcccCCeeccccccccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999988763211
Q ss_pred ---cCCCCCCCcCCCCCCCEEEEEccCCCCccccCc----hhHHHHHHHHhHhH----HHHhhhcccCCC
Q psy15857 157 ---VDGHPSNTYSIPLHADFLMAYSTISDSPMFGQR----FGLKDKCSKVVSKT----YQVMSSNVDTSN 215 (455)
Q Consensus 157 ---~d~~~~~~~~iP~~aD~Li~yST~pG~vS~R~~----~fIq~Lc~~~~~~~----~~~m~~~~~~~~ 215 (455)
+++.......+|.++|||++|||+|||+|||++ ||||+||+.|.+.. +.-|+.+|++.+
T Consensus 164 ~~~~~~~~~~~~~iP~~aD~Li~yST~pG~vs~R~~~~GS~fIq~L~~~l~~~~~~~dl~~ilt~Vn~~V 233 (278)
T 3od5_A 164 TNITEVDAASVYTLPAGADFLMCYSVAEGYYSHRETVNGSWYIQDLCEMLGKYGSSLEFTELLTLVNRKV 233 (278)
T ss_dssp ----------CCCEETTTTEEEEESSCTTBCCEEETTTEEHHHHHHHHHHHHHTTTSCHHHHHHHHHHHH
T ss_pred ccccccccccccccCCCCCeEEEEeCCCCeEEecCCCCCcHHHHHHHHHHHhhCCCCCHHHHHHHHHHHH
Confidence 112223456899999999999999999999985 99999999888752 444555555444
No 3
>1m72_A Caspase-1; caspase, cysteine protease, hydrolase-hydrolase inhibitor CO; 2.30A {Spodoptera frugiperda} SCOP: c.17.1.1 PDB: 3sip_B
Probab=100.00 E-value=2.5e-53 Score=419.08 Aligned_cols=211 Identities=50% Similarity=0.835 Sum_probs=185.9
Q ss_pred CccccccCCCCceeCCCCceeEEEEEeCCCCCCCCCCCCCChHHhHHHHHHHHHhCCcEEEEecCCCHHHHHHHHHHHHh
Q psy15857 5 VAKSTVEKDADYYRMDHKHRGLALIFNHEHFDSPHLKSRAGTGADFENLYTTLVNLGFVVKPYHDPEFKVIQNAIDEAAE 84 (455)
Q Consensus 5 ~~~~~~~~~~~~Y~m~~~~~G~aLIInN~~F~~~~l~~R~Gs~~D~~~L~~~F~~LGF~V~~~~nlt~~em~~~l~~~s~ 84 (455)
.++++.++..+.|+|+++++|+||||||.+|....+..|.|+++|+++|+++|++|||+|+++.|+|.+||.+.|++|++
T Consensus 13 ~~~~~~~~~~~~Y~m~~~~rg~aLIInn~~f~~~~l~~R~g~~~Da~~L~~~f~~LGF~V~~~~dlt~~em~~~l~~~~~ 92 (272)
T 1m72_A 13 VARMPVDRNAPYYNMNHKHRGMAIIFNHEHFDIHSLKSRTGTNVDSDNLSKVLKTLGFKVTVFPNLKSEEINKFIQQTAE 92 (272)
T ss_dssp EEECCSCTTCSBCCCCSSEEEEEEEEECCCCSSTTCCCCTTHHHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHT
T ss_pred eeeccCCcccccccCCCCCCCEEEEEechhcCCCCcccCCCCHHHHHHHHHHHHHCCCEEEEecCcCHHHHHHHHHHHHH
Confidence 47789999999999999999999999999998656899999999999999999999999999999999999999999999
Q ss_pred hcCCCCceEEEEEecCCCCceeeeeCCccChhhhHHhhccccccccCCCceEEEEecccCCccCCCceee-eccCCCCCC
Q psy15857 85 QDYTDADCFVMAVLTHGEDGILHAKDVPYKPKNLWSKFTADNCLTLAGKPKLFFIQACQGDKLDAGVTIR-TQVDGHPSN 163 (455)
Q Consensus 85 ~d~~~~d~~vvvilSHG~~g~I~g~D~~v~~~~I~~~F~~~~c~~L~gKPKlFfiQACRG~~~d~gv~~~-~~~d~~~~~ 163 (455)
++|..+||++|||||||.+|.|||+|+.|++++|+++|++.+||+|+|||||||||||||++.+.|+.+. .++|+....
T Consensus 93 ~dh~~~d~~v~~~lsHG~~~~i~~~D~~v~l~~i~~~f~~~~cpsL~gKPKlffiqACRg~~~~~g~~~~~~~~d~~~~~ 172 (272)
T 1m72_A 93 MDHSDADCLLVAVLTHGELGMLYAKDTHYKPDNLWYYFTADKCPTLAGKPKLFFIQACQGDRLDGGITLSRTETDGSPST 172 (272)
T ss_dssp SCCTTEEEEEEEEESCEETTEEECSSSEECTTHHHHTTSTTTCGGGTTSCEEEEEESCSSSBCBCCEEEEC---------
T ss_pred hhcCCCCEEEEEEcCCCCCCEEEecCCcEEHHHHHHHhccccChhhcCCceEEEEeCCCCCcccCCcccccccccccccc
Confidence 8899999999999999999999999999999999999999999999999999999999999999987542 355654334
Q ss_pred CcCCCCCCCEEEEEccCCCCccccCc----hhHHHHHHHHhHhH----HHHhhhcccCCC
Q psy15857 164 TYSIPLHADFLMAYSTISDSPMFGQR----FGLKDKCSKVVSKT----YQVMSSNVDTSN 215 (455)
Q Consensus 164 ~~~iP~~aD~Li~yST~pG~vS~R~~----~fIq~Lc~~~~~~~----~~~m~~~~~~~~ 215 (455)
...+|.++|||++|||+|||+|||++ ||||+||+.|.+.. +..|+.+|++.+
T Consensus 173 ~~~iP~~aD~Li~ysT~pG~vs~r~~~~GS~fiq~L~~~l~~~~~~~dl~~ilt~V~~~V 232 (272)
T 1m72_A 173 SYRIPVHADFLIAFSTVPGYFSWRNTTRGSWFMQALCEELRYAGTERDILTLLTFVCQKV 232 (272)
T ss_dssp CEEECTTCSEEEEESSCTTBCCEEETTTEEHHHHHHHHHHHHHTTTSCHHHHHHHHHHHH
T ss_pred ccccCCCCCEEEEEeCCCCcEeecCCCCCCHHHHHHHHHHHhhCCCCCHHHHHHHHHHHH
Confidence 56899999999999999999999975 99999999988842 444555555554
No 4
>3h11_B Caspase-8; cell death, apoptosis, caspase, alternative splicing, HOST- virus interaction, polymorphism, cytoplasm, disease mutation; 1.90A {Homo sapiens} SCOP: c.17.1.1 PDB: 2k7z_A 1i4e_B 2fun_B 2c2z_B*
Probab=100.00 E-value=4e-53 Score=417.43 Aligned_cols=216 Identities=30% Similarity=0.495 Sum_probs=178.5
Q ss_pred CCCCceeCCCCceeEEEEEeCCCCCC--------CCCCCCCChHHhHHHHHHHHHhCCcEEEEecCCCHHHHHHHHHHHH
Q psy15857 12 KDADYYRMDHKHRGLALIFNHEHFDS--------PHLKSRAGTGADFENLYTTLVNLGFVVKPYHDPEFKVIQNAIDEAA 83 (455)
Q Consensus 12 ~~~~~Y~m~~~~~G~aLIInN~~F~~--------~~l~~R~Gs~~D~~~L~~~F~~LGF~V~~~~nlt~~em~~~l~~~s 83 (455)
...+.|+|+++|+|+||||||.+|.. ..+++|.||++|+++|+++|++|||+|+++.|||++||.++|++|+
T Consensus 5 ~~~~~Y~m~~~~rG~aLIInn~~F~~~~~~~~~~~~l~~R~Gt~~D~~~L~~~f~~LGF~V~~~~dlt~~em~~~l~~~~ 84 (271)
T 3h11_B 5 TLDKVYQMKSKPRGYCLIINNHNFAKAREKVPKLHSIRDRNGTHLDAGALTTTFEELHFEIKPHDDCTVEQIYEILKIYQ 84 (271)
T ss_dssp --CCBCCCCSSSCCEEEEEECCCCSHHHHTCGGGTTCCCCTTHHHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHH
T ss_pred cccccCCCCCCCCCEEEEEEchhcCcccccccccccCCCCCCcHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHH
Confidence 35688999999999999999999985 1489999999999999999999999999999999999999999999
Q ss_pred hhcCCCCceEEEEEecCCCCceeeeeCCc-cChhhhHHhhccccccccCCCceEEEEecccCCccCCCceeeec------
Q psy15857 84 EQDYTDADCFVMAVLTHGEDGILHAKDVP-YKPKNLWSKFTADNCLTLAGKPKLFFIQACQGDKLDAGVTIRTQ------ 156 (455)
Q Consensus 84 ~~d~~~~d~~vvvilSHG~~g~I~g~D~~-v~~~~I~~~F~~~~c~~L~gKPKlFfiQACRG~~~d~gv~~~~~------ 156 (455)
+++|..+|||+|||||||.+|.|||+|+. +++++|+++|++.+||+|+|||||||||||||++.+.|+.+...
T Consensus 85 ~~~h~~~d~~v~~ilSHG~~g~i~g~D~~~v~l~~I~~~f~~~~CpsL~gKPKlffiQACRG~~~~~gv~~~~~~~~~~~ 164 (271)
T 3h11_B 85 LMDHSNMDCFICCILSHGDKGIIYGTDGQEAPIYELTSQFTGLKCPSLAGKPKVFFIQACQGDNYQKGIPVETASEEQPY 164 (271)
T ss_dssp HSCCTTCSCEEEEEESCEETTEEECTTSCEEEHHHHHGGGSTTTCGGGTTSCEEEEEESCCSSBCC--------------
T ss_pred HhcCCCCCEEEEEEEcCCcCCEEEecCCCeecHHHHHHHhhhccChhhcCCccEEEEeccCCCcccCCceeccCCccccc
Confidence 98999999999999999999999999996 99999999999999999999999999999999999988765211
Q ss_pred --cCCCCCCCcCCCCCCCEEEEEccCCCCccccCc----hhHHHHHHHHhHhH-----HHHhhhcccCCCCccc----cc
Q psy15857 157 --VDGHPSNTYSIPLHADFLMAYSTISDSPMFGQR----FGLKDKCSKVVSKT-----YQVMSSNVDTSNGECQ----TD 221 (455)
Q Consensus 157 --~d~~~~~~~~iP~~aD~Li~yST~pG~vS~R~~----~fIq~Lc~~~~~~~-----~~~m~~~~~~~~~e~~----~~ 221 (455)
.|........+|.++|||++|||+|||+|||++ ||||+||+.|.+.. ...|+.+|++.+.+.. ..
T Consensus 165 ~e~d~~~~~~~~iP~~aD~Li~yST~pG~vs~R~~~~GS~fIq~L~~~l~~~~~~~~dl~~ilt~Vn~~V~~~~~~~~~~ 244 (271)
T 3h11_B 165 LEMALSSPQTRYIPDEADFLLGMATVNNCVSYRNPAEGTWYIQSLCQSLRERCPRGDDILTILTEVNYEVSNKDDKKNMG 244 (271)
T ss_dssp --------CCCCSCSSSSEEEEESSCTTBCCEEETTTEEHHHHHHHHHHHHHGGGTCCHHHHHHHHHHHHHTC------C
T ss_pred cccccccccccccCCCCceEEEEECCCCceeecCCCCCcHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhhcccCCCCC
Confidence 111112345799999999999999999999986 99999999887742 4445666666665433 23
Q ss_pred cccccc
Q psy15857 222 GHESHT 227 (455)
Q Consensus 222 ~~~~~~ 227 (455)
.|.||.
T Consensus 245 kQ~P~~ 250 (271)
T 3h11_B 245 KQMPQP 250 (271)
T ss_dssp CCCCEE
T ss_pred EEeeEE
Confidence 455554
No 5
>2nn3_C Caspase-1; cysteine protease, hydrolase; 3.00A {Spodoptera frugiperda}
Probab=100.00 E-value=6.8e-53 Score=422.22 Aligned_cols=211 Identities=50% Similarity=0.825 Sum_probs=180.7
Q ss_pred CccccccCCCCceeCCCCceeEEEEEeCCCCCCCCCCCCCChHHhHHHHHHHHHhCCcEEEEecCCCHHHHHHHHHHHHh
Q psy15857 5 VAKSTVEKDADYYRMDHKHRGLALIFNHEHFDSPHLKSRAGTGADFENLYTTLVNLGFVVKPYHDPEFKVIQNAIDEAAE 84 (455)
Q Consensus 5 ~~~~~~~~~~~~Y~m~~~~~G~aLIInN~~F~~~~l~~R~Gs~~D~~~L~~~F~~LGF~V~~~~nlt~~em~~~l~~~s~ 84 (455)
.++++.++..+.|+|+++++|+||||||.+|....+..|.|+++|+++|+++|++|||+|+++.|+|++||.+.|++|++
T Consensus 41 ~~~~~~~~~~~~Y~m~~~~rg~aLIInN~~F~~~~l~~R~Gt~~Da~~L~~~f~~LGF~V~~~~dlt~~em~~~l~~f~~ 120 (310)
T 2nn3_C 41 VARMPVDRNAPYYNMNHKHRGMAIIFNHEHFDIHSLKSRTGTNVDSDNLSKVLKTLGFKVTVFPNLKSEEINKFIQQTAE 120 (310)
T ss_dssp -----CCSSCSBCCCCSSBCCEEEEEECCCCSSTTCCCCTTHHHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHS
T ss_pred eeecccCCccccccCCCCCcCEEEEEechhcCCCCcccCCCCHHHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHH
Confidence 46788999999999999999999999999998656899999999999999999999999999999999999999999999
Q ss_pred hcCCCCceEEEEEecCCCCceeeeeCCccChhhhHHhhccccccccCCCceEEEEecccCCccCCCceee-eccCCCCCC
Q psy15857 85 QDYTDADCFVMAVLTHGEDGILHAKDVPYKPKNLWSKFTADNCLTLAGKPKLFFIQACQGDKLDAGVTIR-TQVDGHPSN 163 (455)
Q Consensus 85 ~d~~~~d~~vvvilSHG~~g~I~g~D~~v~~~~I~~~F~~~~c~~L~gKPKlFfiQACRG~~~d~gv~~~-~~~d~~~~~ 163 (455)
++|..+|||||||||||.+|.||++|+.|++++|+++|++.+||+|+|||||||||||||++.+.|+.+. .++|+....
T Consensus 121 ~dh~~~D~~vv~ilSHG~~g~i~g~D~~v~l~~I~~~f~~~~CpsL~gKPKlffiQACRG~~~d~g~~~~~~~~d~~~~~ 200 (310)
T 2nn3_C 121 MDHSDADCLLVAVLTAGELGMLYAKDTHYKPDNLWYYFTADKCPTLAGKPKLFFIQACQGDRLDGGITLSRTETDGSPST 200 (310)
T ss_dssp SCGGGBSCEEEEEEEEEETTEEECSSCEECTHHHHGGGSTTTCGGGTTSCEEEEEEEECCCCCCCCC-------------
T ss_pred hccCCCCEEEEEEeCCCCCCEEEecCCcEEHHHHHHHhccccChhhcCCceEEEEecccCCccccCcccccccccccccc
Confidence 8899999999999999999999999999999999999999999999999999999999999999987532 345654334
Q ss_pred CcCCCCCCCEEEEEccCCCCccccCc----hhHHHHHHHHhHhH----HHHhhhcccCCC
Q psy15857 164 TYSIPLHADFLMAYSTISDSPMFGQR----FGLKDKCSKVVSKT----YQVMSSNVDTSN 215 (455)
Q Consensus 164 ~~~iP~~aD~Li~yST~pG~vS~R~~----~fIq~Lc~~~~~~~----~~~m~~~~~~~~ 215 (455)
...+|.++||||+|||+|||+|||++ ||||+||+.|.+.. +..|+.+|++.+
T Consensus 201 ~~~iP~~aD~LiayST~pG~vS~R~~~~GSwFIqaL~~~l~~~~~~~dl~~ilt~Vn~~V 260 (310)
T 2nn3_C 201 SYRIPVHADFLIAFSTVPGYFSWRNTTRGSWFMQALCEELRYAGTERDILTLLTFVCQKV 260 (310)
T ss_dssp CCCCCCSTTEEEEECCCCCEEESSSSEEEEHHHHHHHHHHHTTTTTSCHHHHHHHHHHHH
T ss_pred ccccCCCCCEEEEEeCCCCceeecCCCCCCHHHHHHHHHHHhhCCCCCHHHHHHHHHHHH
Confidence 56899999999999999999999986 99999999988742 444555555444
No 6
>1nw9_B Caspase 9, apoptosis-related cysteine protease; XIAP, caspase inhibition, caspase activation, dimerization; 2.40A {Homo sapiens} SCOP: c.17.1.1 PDB: 1jxq_A* 2ar9_A
Probab=100.00 E-value=4.2e-52 Score=411.56 Aligned_cols=220 Identities=25% Similarity=0.344 Sum_probs=176.9
Q ss_pred cCCCCceeCCCCceeEEEEEeCCCCCC-CCCCCCCChHHhHHHHHHHHHhCCcEEEEecCCCHHHHHHHHHHHHhhcCCC
Q psy15857 11 EKDADYYRMDHKHRGLALIFNHEHFDS-PHLKSRAGTGADFENLYTTLVNLGFVVKPYHDPEFKVIQNAIDEAAEQDYTD 89 (455)
Q Consensus 11 ~~~~~~Y~m~~~~~G~aLIInN~~F~~-~~l~~R~Gs~~D~~~L~~~F~~LGF~V~~~~nlt~~em~~~l~~~s~~d~~~ 89 (455)
.+....|+|+++|+|+||||||.+|.. ..+.+|.||++|+++|+++|++|||+|+++.|+|++||.+.|++|++++|..
T Consensus 8 ~~~~~~Y~m~~~~rg~aLIInn~~f~~~~~l~~R~Gt~~D~~~L~~~f~~LgF~V~~~~dlt~~em~~~l~~~~~~~h~~ 87 (277)
T 1nw9_B 8 GNADLAYILSMEPCGHCLIINNVNFCRESGLRTRTGSNIDCEKLRRRFSSLHFMVEVKGDLTAKKMVLALLELARQDHGA 87 (277)
T ss_dssp HCTTTBCCCCCSSCEEEEEEECCCCCGGGTCCCCTTHHHHHHHHHHHHHHTTEEEEEEESCCHHHHHHHHHHHHHSCCTT
T ss_pred CCCcceeeCCCCcccEEEEEeCcccCCCCCCCCCCCcHHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhhccc
Confidence 345578999999999999999999985 3589999999999999999999999999999999999999999999999999
Q ss_pred CceEEEEEecCCCC-------ceeeeeCCc-cChhhhHHhhccccccccCCCceEEEEecccCCccCCCceeeec-----
Q psy15857 90 ADCFVMAVLTHGED-------GILHAKDVP-YKPKNLWSKFTADNCLTLAGKPKLFFIQACQGDKLDAGVTIRTQ----- 156 (455)
Q Consensus 90 ~d~~vvvilSHG~~-------g~I~g~D~~-v~~~~I~~~F~~~~c~~L~gKPKlFfiQACRG~~~d~gv~~~~~----- 156 (455)
+||+||||||||.+ |.||++|+. |++++|+++|++.+||+|+|||||||||||||++.+.|+.+...
T Consensus 88 ~D~~vv~ilSHG~~~~~~~~~g~iy~~D~~~v~l~~i~~~f~~~~CpsL~gKPKlffiQACRG~~~d~g~~~~~~~~~~~ 167 (277)
T 1nw9_B 88 LDCCVVVILSHGCQASHLQFPGAVYGTDGCPVSVEKIVNIFNGTSCPSLGGKPKLFFIQACGGEQKDHGFEVASTSPEDE 167 (277)
T ss_dssp CSEEEEEEEEEEECCCCSSSCCEEECTTSCEEEHHHHHHTTCTTTCGGGTTSCEEEEEEEEC------------------
T ss_pred CCeEEEEEeCCCCccccccCCCcEEecCCceeeHHHHHHHhcccCChhHcCCCcEEEEeccCCCcccCCceeccCCcccc
Confidence 99999999999998 999999995 99999999999999999999999999999999999988764210
Q ss_pred -------cCCC-----------CCCCcCCCCCCCEEEEEccCCCCccccCc----hhHHHHHHHHhHh----HHHHhhhc
Q psy15857 157 -------VDGH-----------PSNTYSIPLHADFLMAYSTISDSPMFGQR----FGLKDKCSKVVSK----TYQVMSSN 210 (455)
Q Consensus 157 -------~d~~-----------~~~~~~iP~~aD~Li~yST~pG~vS~R~~----~fIq~Lc~~~~~~----~~~~m~~~ 210 (455)
+++. ......+|.++|||++|||+|||+|||++ ||||+||+.|.+. .+..|+.+
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~aD~Li~ysT~pG~vs~R~~~~GS~fiq~L~~~l~~~~~~~dl~~ilt~ 247 (277)
T 1nw9_B 168 SPGSNPEPDATPFQEGLRTFDQLDAISSLPTPSDIFVSYSTFPGFVSWRDPKSGSWYVETLDDIFEQWAHSEDLQSLLLR 247 (277)
T ss_dssp ---------CBCCC------------CCCCCSCSEEEEEECCCCBSSTTCTTSCBHHHHHHHHHHHHHTTTSCHHHHHHH
T ss_pred cccccccccccccccccccccccccccccCCCCCEEEEEcCCCCeEEEcCCCCCcHHHHHHHHHHHHhCCCCCHHHHHHH
Confidence 1110 01246799999999999999999999976 9999999988873 24445666
Q ss_pred ccCCCCccccccccccccCC
Q psy15857 211 VDTSNGECQTDGHESHTNGS 230 (455)
Q Consensus 211 ~~~~~~e~~~~~~~~~~~~s 230 (455)
|++.+..-....|.||..++
T Consensus 248 V~~~V~~~~~~kQ~P~~~st 267 (277)
T 1nw9_B 248 VANAVSVKGIYKQMPGCFNF 267 (277)
T ss_dssp HHHHHHTTCCSCCCCCCEEC
T ss_pred HHHHHhhccCccCcccceee
Confidence 66666544444566664443
No 7
>4ehd_A Caspase-3; caspase, apoptosis, allosteric inhibition; 1.58A {Homo sapiens} PDB: 4ehk_A 4ehf_A 4ehn_A 1cp3_A 4ehh_A 4eha_A 4ehl_A 1i3o_A
Probab=100.00 E-value=5.1e-52 Score=410.43 Aligned_cols=203 Identities=31% Similarity=0.531 Sum_probs=176.6
Q ss_pred CCCCceeCCCCceeEEEEEeCCCCCC-CCCCCCCChHHhHHHHHHHHHhCCcEEEEecCCCHHHHHHHHHHHHhhcCCCC
Q psy15857 12 KDADYYRMDHKHRGLALIFNHEHFDS-PHLKSRAGTGADFENLYTTLVNLGFVVKPYHDPEFKVIQNAIDEAAEQDYTDA 90 (455)
Q Consensus 12 ~~~~~Y~m~~~~~G~aLIInN~~F~~-~~l~~R~Gs~~D~~~L~~~F~~LGF~V~~~~nlt~~em~~~l~~~s~~d~~~~ 90 (455)
...+.|+|+++++|+||||||.+|.. ..+++|.|+++|+++|+++|++|||+|+++.|||++||.+.|++|++++|..+
T Consensus 32 ~~~~~Y~m~~~~rg~aLIInN~~F~~~~~l~~R~Gt~~D~~~L~~~f~~LGF~V~~~~dlt~~em~~~l~~f~~~dh~~~ 111 (277)
T 4ehd_A 32 SLDNSYKMDYPEMGLCIIINNKNFHKSTGMTSRSGTDVDAANLRETFRNLKYEVRNKNDLTREEIVELMRDVSKEDHSKR 111 (277)
T ss_dssp CCCCBCCCCSSEEEEEEEEECCCCCGGGTCCCCTTHHHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHTSCCTTE
T ss_pred CccccccCCCCCCCEEEEEEchhcCCcCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhhcccCC
Confidence 45678999999999999999999985 36899999999999999999999999999999999999999999999899999
Q ss_pred ceEEEEEecCCCCceeeeeCCccChhhhHHhhccccccccCCCceEEEEecccCCccCCCceeeeccCCCCCCCcCCCCC
Q psy15857 91 DCFVMAVLTHGEDGILHAKDVPYKPKNLWSKFTADNCLTLAGKPKLFFIQACQGDKLDAGVTIRTQVDGHPSNTYSIPLH 170 (455)
Q Consensus 91 d~~vvvilSHG~~g~I~g~D~~v~~~~I~~~F~~~~c~~L~gKPKlFfiQACRG~~~d~gv~~~~~~d~~~~~~~~iP~~ 170 (455)
|||||||||||.+|.|||+|+.|++++|+++|++.+||+|+|||||||||||||++.+.|+......+ .......+|.+
T Consensus 112 d~~vv~ilSHG~~g~i~g~D~~v~l~~I~~~f~~~~CpsL~gKPKlffiQACRG~~~~~g~~~~~~~~-~~~~~~~ip~~ 190 (277)
T 4ehd_A 112 SSFVCVLLSHGEEGIIFGTNGPVDLKKITNFFRGDRCRSLTGKPKLFIIQACRGTELDCGIETDSGVD-DDMACHKIPVE 190 (277)
T ss_dssp EEEEEEEESCEETTEEEETTEEEEHHHHHHTTSTTTCGGGTTSCEEEEEESCCSSBCBCCCCC-----------CCCCTT
T ss_pred CEEEEEEEcCCCCCEEEEeCCcEeHHHHHHHhhhccCchhcCCccEEEEecCCCCcccCCccccCCcc-ccccccccCCC
Confidence 99999999999999999999999999999999999999999999999999999999999875421111 11245789999
Q ss_pred CCEEEEEccCCCCccccCc----hhHHHHHHHHhHhH----HHHhhhcccCCC
Q psy15857 171 ADFLMAYSTISDSPMFGQR----FGLKDKCSKVVSKT----YQVMSSNVDTSN 215 (455)
Q Consensus 171 aD~Li~yST~pG~vS~R~~----~fIq~Lc~~~~~~~----~~~m~~~~~~~~ 215 (455)
+|||++|||+|||+|||++ ||||+||+.|.+.. +.-|+.+|++.+
T Consensus 191 aD~Li~yST~pG~vs~r~~~~GS~fIq~L~~~l~~~~~~~dl~~ilt~V~~~V 243 (277)
T 4ehd_A 191 ADFLYACSTAPGYYSWRNSKDGSWFIQSLCAMLKQYADKLEFMHILTRVNRKV 243 (277)
T ss_dssp TTEEEEESSCTTBCCEEETTTEEHHHHHHHHHHHHHTTTSCHHHHHHHHHHHH
T ss_pred CCEEEEEECCCCeEeecCCCCCcHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
Confidence 9999999999999999975 99999999888742 333454454444
No 8
>2j32_A Caspase-3; Pro-caspase3, thiol protease, hydrolase, hydrolase-hydrolase inhibitor complex; 1.30A {Homo sapiens} PDB: 2j30_A 3h0e_A* 2j33_A 3pd1_A 2j31_A 3pcx_A 1nms_A* 1nmq_A* 3deh_A* 3dei_A* 3dej_A* 3dek_A* 3pd0_A 3itn_A 1qx3_A
Probab=100.00 E-value=1.3e-51 Score=402.41 Aligned_cols=201 Identities=32% Similarity=0.556 Sum_probs=175.2
Q ss_pred CCceeCCCCceeEEEEEeCCCCCCC-CCCCCCChHHhHHHHHHHHHhCCcEEEEecCCCHHHHHHHHHHHHhhcCCCCce
Q psy15857 14 ADYYRMDHKHRGLALIFNHEHFDSP-HLKSRAGTGADFENLYTTLVNLGFVVKPYHDPEFKVIQNAIDEAAEQDYTDADC 92 (455)
Q Consensus 14 ~~~Y~m~~~~~G~aLIInN~~F~~~-~l~~R~Gs~~D~~~L~~~F~~LGF~V~~~~nlt~~em~~~l~~~s~~d~~~~d~ 92 (455)
++.|+|+++++|+||||||.+|... .+.+|.|+++|+++|+++|++|||+|+++.|+|.+||.+.|++|++++|..+||
T Consensus 6 ~~~Y~m~~~~rg~aLIInn~~f~~~~~l~~r~g~~~D~~~l~~~f~~LgF~V~~~~dlt~~em~~~l~~~~~~~~~~~d~ 85 (250)
T 2j32_A 6 DNSYKMDYPEMGLCIIINNKNFHKSTGMTSRSGTDVDAANLRETFRNLKYEVRNKNDLTREEIVELMRDVSKEDHSKRSS 85 (250)
T ss_dssp CCBCCCCSSEEEEEEEEECCCCCGGGTCCCCTTHHHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHTSCCTTEEE
T ss_pred cccccCCCCCccEEEEEechhcCCCCCCcCCCCCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHhhccCCCE
Confidence 4689999999999999999999852 589999999999999999999999999999999999999999999989999999
Q ss_pred EEEEEecCCCCceeeeeCCccChhhhHHhhccccccccCCCceEEEEecccCCccCCCceeeeccCCCCCCCcCCCCCCC
Q psy15857 93 FVMAVLTHGEDGILHAKDVPYKPKNLWSKFTADNCLTLAGKPKLFFIQACQGDKLDAGVTIRTQVDGHPSNTYSIPLHAD 172 (455)
Q Consensus 93 ~vvvilSHG~~g~I~g~D~~v~~~~I~~~F~~~~c~~L~gKPKlFfiQACRG~~~d~gv~~~~~~d~~~~~~~~iP~~aD 172 (455)
++|||||||.+|.||++|+.|++++|+++|++.+||+|+|||||||||||||++.+.|+......+. ......+|.++|
T Consensus 86 ~v~~~lsHG~~g~i~~~D~~v~l~~i~~~f~~~~cp~L~gKPKlf~iqACRg~~~~~g~~~~~~~~~-~~~~~~ip~~aD 164 (250)
T 2j32_A 86 FVCVLLSHGEEGIIFGTNGPVDLKKITNFFRGDRCRSLTGKPKLFIIQACRGTELDCGIATDSGVDD-DMACHKIPVEAD 164 (250)
T ss_dssp EEEEEESCEETTEEEETTEEEEHHHHHHTTSTTTCGGGTTSCEEEEEESCSEEECBCCCCC-----------CCCCTTTT
T ss_pred EEEEECCCCCCCeEEecCCcEEHHHHHHHhccccChhHcCCCeEEEEecccCCcccCCccccCCccc-cccccccCCCCC
Confidence 9999999999999999999999999999999999999999999999999999999988753211110 113567999999
Q ss_pred EEEEEccCCCCccccCc----hhHHHHHHHHhHh----HHHHhhhcccCCC
Q psy15857 173 FLMAYSTISDSPMFGQR----FGLKDKCSKVVSK----TYQVMSSNVDTSN 215 (455)
Q Consensus 173 ~Li~yST~pG~vS~R~~----~fIq~Lc~~~~~~----~~~~m~~~~~~~~ 215 (455)
||++|||+|||+|||++ ||||+||+.|.+. .+..|..+|++.+
T Consensus 165 ~Li~ysT~pG~vs~r~~~~gS~fiq~L~~~l~~~~~~~dl~~ilt~V~~~V 215 (250)
T 2j32_A 165 FLYAYSTAPGYYSWRNSKDGSWFIQSLCAMLKQYADKLEFMHILTRVNRKV 215 (250)
T ss_dssp EEEEESSCTEECCEEETTTEEHHHHHHHHHHHHHTTTSCHHHHHHHHHHHH
T ss_pred EEEEEeCCCccEEecCCCCCcHHHHHHHHHHHHhCCCCCHHHHHHHHHHHH
Confidence 99999999999999966 8999999998873 2444555555544
No 9
>2fp3_A Caspase NC; apoptosis, initiator caspase activation, dimerization, active site conformation, hydrolysis/apoptosis complex; 2.50A {Drosophila melanogaster}
Probab=100.00 E-value=1.8e-50 Score=406.37 Aligned_cols=205 Identities=20% Similarity=0.378 Sum_probs=167.8
Q ss_pred ccCCCCceeCCCC-ceeEEEEEeCCCCCCCCCCCCCChHHhHHHHHHHHHhCCcEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy15857 10 VEKDADYYRMDHK-HRGLALIFNHEHFDSPHLKSRAGTGADFENLYTTLVNLGFVVKPYHDPEFKVIQNAIDEAAEQDYT 88 (455)
Q Consensus 10 ~~~~~~~Y~m~~~-~~G~aLIInN~~F~~~~l~~R~Gs~~D~~~L~~~F~~LGF~V~~~~nlt~~em~~~l~~~s~~d~~ 88 (455)
.++..+.|+|+++ ++|+||||||.+|.... ..|.|+++|+++|+++|++|||+|+++.|+|++||.+.|++|++++|.
T Consensus 46 ~~~~~~~Y~m~~~~~rg~aLIInN~~F~~~~-~~R~Gt~~D~~~L~~~f~~LGF~V~~~~dlt~~em~~~l~~f~~~~h~ 124 (316)
T 2fp3_A 46 DSAILGTYKMQSRFNRGVLLMVNIMDYPDQN-RRRIGAEKDSKSLIHLFQELNFTIFPYGNVNQDQFFKLLTMVTSSSYV 124 (316)
T ss_dssp SCCSSCBCCCCCSSCSEEEEEEECCCCSSTT-SCCTTHHHHHHHHHHHHHHTTEEEEEECSCCHHHHHHHHHHHHTSHHH
T ss_pred cCCccccccCCCCCCCcEEEEEeCcccCCCC-CCCCCcHHHHHHHHHHHHHCCCEEEEccCCCHHHHHHHHHHHHHHhhc
Confidence 4557789999999 99999999999998544 899999999999999999999999999999999999999999998888
Q ss_pred -CCceEEEEEecCCCC----ceeeeeCCc-cChhhhHHhhccccccccCCCceEEEEecccCCccCCCceeeecc-----
Q psy15857 89 -DADCFVMAVLTHGED----GILHAKDVP-YKPKNLWSKFTADNCLTLAGKPKLFFIQACQGDKLDAGVTIRTQV----- 157 (455)
Q Consensus 89 -~~d~~vvvilSHG~~----g~I~g~D~~-v~~~~I~~~F~~~~c~~L~gKPKlFfiQACRG~~~d~gv~~~~~~----- 157 (455)
.+||+||||||||.+ |.|||+|+. |++++|+++|++.+||+|+|||||||||||||++.+.|+......
T Consensus 125 ~~~D~~vv~ilSHG~~~~g~g~i~g~D~~~v~l~~I~~~f~~~~CpsL~gKPKlffiQACRG~~~d~g~~~~~~~~~~~~ 204 (316)
T 2fp3_A 125 QNTECFVMVLMTHGNSVEGKEKVEFRDGSVVDMQKIKDHFQTAKCPYLVNKPKVLMFPFARGDEYDLGHPKNQGNLMEPV 204 (316)
T ss_dssp HTCSCEEEEEESCEECCTTCCEEECTTSCEEEHHHHHHTTSTTTCGGGTTSCEEEEESCC--------------------
T ss_pred CCCCEEEEEEccCCCccCCCCEEEeecCcEEeHHHHHHHhccccChhhcCCceEEEEecCCCCcccCCceeccCcccccc
Confidence 999999999999998 999999998 999999999999999999999999999999999999887642110
Q ss_pred -------C----CC--CCCCcCCCCCCCEEEEEccCCCCccccCc----hhHHHHHHHHhHhH----HHHhhhcccCCC
Q psy15857 158 -------D----GH--PSNTYSIPLHADFLMAYSTISDSPMFGQR----FGLKDKCSKVVSKT----YQVMSSNVDTSN 215 (455)
Q Consensus 158 -------d----~~--~~~~~~iP~~aD~Li~yST~pG~vS~R~~----~fIq~Lc~~~~~~~----~~~m~~~~~~~~ 215 (455)
+ .. ......+|.++||||+|||+|||+|||++ ||||+||+.|.+.. +..|+.+|++.+
T Consensus 205 ~~~~~~~~~~~~~~d~~~~~~~iP~~aD~Li~yST~pG~vS~R~~~~GSwFIq~L~~~l~~~~~~~dl~~ilt~Vn~~V 283 (316)
T 2fp3_A 205 YTAQEEKWPDTQTEGIPSPSTNVPSLADTLVCYANTPGYVTHRDLDTGSWYIQKFCQVMADHAHDTDLEDILKKTSEAV 283 (316)
T ss_dssp -------------------CCCCCCCCSEEEEECCCSCCCBTTTBCHHHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccCCCCCEEEEEeCCCCceeccCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
Confidence 0 00 12456799999999999999999999987 99999999988732 344554444444
No 10
>1f1j_A Caspase-7 protease; caspase-7, cysteine protease, hydrolase, apoptosis, hydrolas hydrolase inhibitor complex; 2.35A {Homo sapiens} SCOP: c.17.1.1 PDB: 1kmc_A 3r5k_A 1i4o_A 1gqf_A 3h1p_A 1shj_A* 1k86_A 1k88_A 1shl_A*
Probab=100.00 E-value=3.7e-50 Score=401.93 Aligned_cols=204 Identities=33% Similarity=0.550 Sum_probs=174.6
Q ss_pred CCCCceeCCCCceeEEEEEeCCCCCC-CCCCCCCChHHhHHHHHHHHHhCCcEEEEecCCCHHHHHHHHHHHHhhcCCCC
Q psy15857 12 KDADYYRMDHKHRGLALIFNHEHFDS-PHLKSRAGTGADFENLYTTLVNLGFVVKPYHDPEFKVIQNAIDEAAEQDYTDA 90 (455)
Q Consensus 12 ~~~~~Y~m~~~~~G~aLIInN~~F~~-~~l~~R~Gs~~D~~~L~~~F~~LGF~V~~~~nlt~~em~~~l~~~s~~d~~~~ 90 (455)
.+.+.|+|+++++|+||||||.+|.. ..+.+|.|+++|+++|+++|++|||+|+++.|+|.+||.+.|++|++++|..+
T Consensus 57 ~~~~~Y~m~~~~rg~aLIInN~~f~~~~~L~~R~G~~~Da~~L~~~f~~LGF~V~~~~dlt~~em~~~l~~~~~~~h~~~ 136 (305)
T 1f1j_A 57 VPTYQYNMNFEKLGKCIIINNKNFDKVTGMGVRNGTDKDAEALFKCFRSLGFDVIVYNDCSCAKMQDLLKKASEEDHTNA 136 (305)
T ss_dssp ---CBCCCCSSEEEEEEEEECCCCCTTTTCCCCTTHHHHHHHHHHHHHHHTEEEEEEESCCHHHHHHHHHHHHHSCGGGE
T ss_pred CcccccccCCCCCCEEEEEechhcCCCccCccCCCcHHHHHHHHHHHHHCCCEEEEecCcCHHHHHHHHHHHHHhhcCCC
Confidence 34689999999999999999999986 36899999999999999999999999999999999999999999999999999
Q ss_pred ceEEEEEecCCCCceeeeeCCccChhhhHHhhccccccccCCCceEEEEecccCCccCCCceeeecc--CCCCCCCcCCC
Q psy15857 91 DCFVMAVLTHGEDGILHAKDVPYKPKNLWSKFTADNCLTLAGKPKLFFIQACQGDKLDAGVTIRTQV--DGHPSNTYSIP 168 (455)
Q Consensus 91 d~~vvvilSHG~~g~I~g~D~~v~~~~I~~~F~~~~c~~L~gKPKlFfiQACRG~~~d~gv~~~~~~--d~~~~~~~~iP 168 (455)
||++|||||||.+|.|||+|+.|++++|+++|++.+||+|+|||||||||||||++.+.|+...... +........+|
T Consensus 137 d~~vv~ilsHG~~~~i~g~D~~v~l~~I~~~f~~~~CpsL~gKPKlffiQACRG~~~~~g~~~~~~~~~~~~~~~~~~ip 216 (305)
T 1f1j_A 137 ACFACILLSHGEENVIYGKDGVTPIKDLTAHFRGDRSKTLLEKPKLFFIQACRGTELDDGIQADSGPINDTDANPRYKIP 216 (305)
T ss_dssp EEEEEEEESCEETTEEECSSSEEEHHHHHHTTSTTTCGGGTTSCEEEEEESCCSSBCBCCBC---------------CBC
T ss_pred CEEEEEEecCCCCCeEEecCCeEEHHHHHHHhhhccChhhcCCceEEEeccccCCcccCCccccCCcccccccccccccC
Confidence 9999999999999999999999999999999999999999999999999999999999887541110 00011246899
Q ss_pred CCCCEEEEEccCCCCccccCc----hhHHHHHHHHhHhH----HHHhhhcccCCC
Q psy15857 169 LHADFLMAYSTISDSPMFGQR----FGLKDKCSKVVSKT----YQVMSSNVDTSN 215 (455)
Q Consensus 169 ~~aD~Li~yST~pG~vS~R~~----~fIq~Lc~~~~~~~----~~~m~~~~~~~~ 215 (455)
.++||||+|||+|||+|||++ ||||+||+.|.+.. +..|+.+|++.+
T Consensus 217 ~~aD~LiayST~pG~vs~r~~~~GS~FiqaL~~~l~~~~~~~dl~~ilt~Vn~~V 271 (305)
T 1f1j_A 217 VEADFLFAYSTVPGYYSWRSPGRGSWFVQALCSILEEHGKDLEIMQILTRVNDRV 271 (305)
T ss_dssp TTTTEEEEESSCTTBCCEEETTTEEHHHHHHHHHHHHHTTTSCHHHHHHHHHHHH
T ss_pred CCCCEEEEEECCCCeeccCCCCCCCHHHHHHHHHHHhhCCCCCHHHHHHHHHHHH
Confidence 999999999999999999976 99999999988753 344555555444
No 11
>3e4c_A Caspase-1; zymogen, inflammasome, ICE, IL-1B, innate immunity, apoptosis, hydrolase, protease protease; 2.05A {Homo sapiens}
Probab=100.00 E-value=1.7e-49 Score=396.79 Aligned_cols=220 Identities=20% Similarity=0.275 Sum_probs=185.0
Q ss_pred cccccCCCCceeCCCCc--eeEEEEEeCCCCCCCCCCCCCChHHhHHHHHHHHHhCCcEEEEecCCCHHHHHHHHHHHHh
Q psy15857 7 KSTVEKDADYYRMDHKH--RGLALIFNHEHFDSPHLKSRAGTGADFENLYTTLVNLGFVVKPYHDPEFKVIQNAIDEAAE 84 (455)
Q Consensus 7 ~~~~~~~~~~Y~m~~~~--~G~aLIInN~~F~~~~l~~R~Gs~~D~~~L~~~F~~LGF~V~~~~nlt~~em~~~l~~~s~ 84 (455)
+++.++.+++|+|.+++ +|+||||||.+|. .+..|.|+++|+++|+++|++|||+|+++.|+|++||.++|++|++
T Consensus 41 ~~~~~~~~e~Y~m~~~~~~~r~aLII~N~~f~--~l~~R~G~~~Da~~L~~~f~~LGF~V~~~~dlt~~em~~~l~~f~~ 118 (302)
T 3e4c_A 41 RIWKQKSAEIYPIMDKSSRTRLALIICNEEFD--SIPRRTGAEVDITGMTMLLQNLGYSVDVKKNLTASDMTTELEAFAH 118 (302)
T ss_dssp HHHHHHGGGBCCCCCTTTCCCEEEEEECCSCS--SSCCCTTHHHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHT
T ss_pred HHHHhccccccccCCCCCCccEEEEEECcCCC--CCCCCCCcHHHHHHHHHHHHHCCCEEEEeeCCCHHHHHHHHHHHHh
Confidence 34556788999999875 7999999999997 6899999999999999999999999999999999999999999986
Q ss_pred -hcCCCCceEEEEEecCCCCceeeeeCC------ccChhhhHHhhccccccccCCCceEEEEecccCCccCCCceeeec-
Q psy15857 85 -QDYTDADCFVMAVLTHGEDGILHAKDV------PYKPKNLWSKFTADNCLTLAGKPKLFFIQACQGDKLDAGVTIRTQ- 156 (455)
Q Consensus 85 -~d~~~~d~~vvvilSHG~~g~I~g~D~------~v~~~~I~~~F~~~~c~~L~gKPKlFfiQACRG~~~d~gv~~~~~- 156 (455)
.+|..+||++|||||||.++.|||+|+ .|++++|+++|++++||+|+|||||||||||||++.+.++.....
T Consensus 119 ~~dh~~~d~~vv~~lsHG~~~~i~g~D~~~~~~~~v~l~~I~~~F~~~~CpsL~gKPKlffIQACRG~~~~~~~~~ds~~ 198 (302)
T 3e4c_A 119 RPEHKTSDSTFLVFMSHGIREGICGKKHSEQVPDILQLNAIFNMLNTKNCPSLKDKPKVIIIQAARGDSPGVVWFKDSVG 198 (302)
T ss_dssp CGGGGGCSCEEEEEEEEEETTEEECTTCCSSSCCEECHHHHHHHTSTTTCGGGTTSCEEEEEEEECSSSCCCCCCCCC--
T ss_pred hhccCCCCEEEEEEeccCcCCeEEeecccccCCcEEEHHHHHHHHhhhcchhhcCCccEEEEECCCCCCCCcceeccCcc
Confidence 589999999999999999999999995 399999999999999999999999999999999998755421100
Q ss_pred cCC----------CCCCCcCCCCCCCEEEEEccCCCCccccCc----hhHHHHHHHHhHh----HHHHhhhcccCCCCcc
Q psy15857 157 VDG----------HPSNTYSIPLHADFLMAYSTISDSPMFGQR----FGLKDKCSKVVSK----TYQVMSSNVDTSNGEC 218 (455)
Q Consensus 157 ~d~----------~~~~~~~iP~~aD~Li~yST~pG~vS~R~~----~fIq~Lc~~~~~~----~~~~m~~~~~~~~~e~ 218 (455)
..+ .......+|.++|||++|||+|||+|||++ ||||+||+.|.+. .+..|+.+|+..+..-
T Consensus 199 ~~~~~~~~~~~~~~~d~~~~ip~~aDfLi~yST~pG~vS~R~~~~GSwFIqaL~~~l~~~~~~~dl~~il~~V~~~v~~~ 278 (302)
T 3e4c_A 199 VSGNLSLPTTEEFEDDAIKKAHIEKDFIAFCSSTPDNVSWRHPTMGSVFIGRLIEHMQEYACSCDVEEIFRKVRFSFEQP 278 (302)
T ss_dssp ------CCCCCCCCCHHHHTSCSSCSEEEEEECCCCCCCSSSTTCCCHHHHHHHHHHHHHTTTSCHHHHHHHHHHHTSSC
T ss_pred cccccccccccccccccccccCCCCCEEEEEeCCCCceeecCCCCCcHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhCC
Confidence 000 001234689999999999999999999986 9999999998774 2555667777666554
Q ss_pred cccccccccc
Q psy15857 219 QTDGHESHTN 228 (455)
Q Consensus 219 ~~~~~~~~~~ 228 (455)
....|.||..
T Consensus 279 ~~~kQ~P~~~ 288 (302)
T 3e4c_A 279 DGRAQMPTTE 288 (302)
T ss_dssp CSSCCCCEEE
T ss_pred CCceeeeeee
Confidence 4556666654
No 12
>3h11_A CAsp8 and FADD-like apoptosis regulator; cell death, apoptosis, caspase, alternative splicing, HOST- virus interaction, polymorphism, cytoplasm, disease mutation; 1.90A {Homo sapiens} PDB: 3h13_A
Probab=100.00 E-value=5.8e-48 Score=380.37 Aligned_cols=195 Identities=23% Similarity=0.319 Sum_probs=157.2
Q ss_pred ccccccCCCCceeCCCCceeEEEEEeCCCCCCCCCCCCCChHHhHHHHHHHHHhCCcEEEEecCCCHHHHHHHHHHHHh-
Q psy15857 6 AKSTVEKDADYYRMDHKHRGLALIFNHEHFDSPHLKSRAGTGADFENLYTTLVNLGFVVKPYHDPEFKVIQNAIDEAAE- 84 (455)
Q Consensus 6 ~~~~~~~~~~~Y~m~~~~~G~aLIInN~~F~~~~l~~R~Gs~~D~~~L~~~F~~LGF~V~~~~nlt~~em~~~l~~~s~- 84 (455)
++++.+...+.|+|+++|+|+||||||.. .|+++|+++|++|||+|+++.|||++||.+.|++|++
T Consensus 25 ~~~~~~~~~~~Y~m~~~~rG~~LIinn~~-------------~D~~~L~~~f~~LgF~V~~~~dlt~~em~~~l~~~~~~ 91 (272)
T 3h11_A 25 AFLPQSIPEERYKMKSKPLGICLIIDCIG-------------NETELLRDTFTSLGYEVQKFLHLSMHGISQILGQFACM 91 (272)
T ss_dssp ----CCSSSCBCCCCCSSSEEEEEEESSC-------------CCCSHHHHHHHHHTEEEEEEESCBHHHHHHHHHHHHTC
T ss_pred CCCCCCCccccCCCCCCcceEEEEECCch-------------HHHHHHHHHHHHCCCEEEEeeCCCHHHHHHHHHHHHhc
Confidence 56678889999999999999999999952 6999999999999999999999999999999999997
Q ss_pred hcCCCCceEEEEEecCCCCceeeeeCCc---cChhhhHHhhccccccccCCCceEEEEecccCCc--cCCCceeeeccCC
Q psy15857 85 QDYTDADCFVMAVLTHGEDGILHAKDVP---YKPKNLWSKFTADNCLTLAGKPKLFFIQACQGDK--LDAGVTIRTQVDG 159 (455)
Q Consensus 85 ~d~~~~d~~vvvilSHG~~g~I~g~D~~---v~~~~I~~~F~~~~c~~L~gKPKlFfiQACRG~~--~d~gv~~~~~~d~ 159 (455)
++|..+|||+|||||||.+|.|||+|+. |++++|+++|++++||+|+|||||||||||||+. .+.|+.+ ++|+
T Consensus 92 ~dh~~~d~~v~~ilSHG~~g~i~g~D~~~~~v~l~~i~~~f~~~~CpsL~gKPKlffiQACRG~~~~~~~g~~~--~~D~ 169 (272)
T 3h11_A 92 PEHRDYDSFVCVLVSRGGSQSVYGVDQTHSGLPLHHIRRMFMGDSCPYLAGKPKMFFIQNYVVSEGQLENSSLL--EVDG 169 (272)
T ss_dssp GGGGGCSEEEEEEEEEEETTEECBTSCCSSCEEHHHHHHHHSTTTCGGGTTSCEEEEEEEEEC-----------------
T ss_pred cccCCCCEEEEEEEcCCCCCeEEEEcCCcceEeHHHHHHHhccccChhhcCCCcEEEEECCCCCCcccCCCcce--eccC
Confidence 5899999999999999999999999996 9999999999999999999999999999999974 3445322 2333
Q ss_pred CC----------CCCcCCCCCCCEEEEEccCCCCccccCc----hhHHHHHHHHhHhH---HHHhhhcccCCC
Q psy15857 160 HP----------SNTYSIPLHADFLMAYSTISDSPMFGQR----FGLKDKCSKVVSKT---YQVMSSNVDTSN 215 (455)
Q Consensus 160 ~~----------~~~~~iP~~aD~Li~yST~pG~vS~R~~----~fIq~Lc~~~~~~~---~~~m~~~~~~~~ 215 (455)
.. .....+|.+||||++|||+|||+|||++ ||||+||+.|.+.. ..-|..+|++.+
T Consensus 170 ~~~~~~~~~~~~~~~~~iP~~aDfL~~yST~pg~~s~R~~~~GSwfIq~Lc~~l~~~~~~dl~~ilt~Vn~~V 242 (272)
T 3h11_A 170 PAMKNVEFKAQKRGLCTVHREADFFWSLCTADMSLLEQSHSSPSLYLQCLSQKLRQERKRPLLDLHIELNGYM 242 (272)
T ss_dssp -----------------CCTTCSEEEEEEEEEGGGTSSTTCCCCHHHHHHHHHHHHCTTSCHHHHHHHHHHHH
T ss_pred cccccccccccccccccCCCCCCEEEEEeccCCeEEEEeCCCCCHHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Confidence 21 2457899999999999999999999986 99999999887742 333455555555
No 13
>3p45_A Caspase-6; protease, huntington'S disease, physio PH, competitive inhibition, hydrolase; 2.53A {Homo sapiens}
Probab=100.00 E-value=1.6e-44 Score=333.95 Aligned_cols=148 Identities=41% Similarity=0.640 Sum_probs=128.7
Q ss_pred ccccccCCCCceeCCCCceeEEEEEeCCCCCCC-CCCCCCChHHhHHHHHHHHHhCCcEEEEecCCCHHHHHHHHHHHHh
Q psy15857 6 AKSTVEKDADYYRMDHKHRGLALIFNHEHFDSP-HLKSRAGTGADFENLYTTLVNLGFVVKPYHDPEFKVIQNAIDEAAE 84 (455)
Q Consensus 6 ~~~~~~~~~~~Y~m~~~~~G~aLIInN~~F~~~-~l~~R~Gs~~D~~~L~~~F~~LGF~V~~~~nlt~~em~~~l~~~s~ 84 (455)
++++.+..++.|+|+++|+|+||||||.+|.+. .+++|.||++|+++|+++|++|||+|++++|||++||.+.|+++++
T Consensus 26 ~~~~~~~~~~~Y~m~~~~rG~aLIinn~~F~~~~~l~~R~Gt~~D~~~L~~~F~~LGF~V~~~~dlt~~em~~~l~~~~~ 105 (179)
T 3p45_A 26 YKREMFDPAEKYKMDHRRRGIALIFNHERFFWHLTLPERRGTCADRDNLTRRFSDLGFEVKCFNDLKAEELLLKIHEVST 105 (179)
T ss_dssp -----CCTTCBCCCCSSBCCEEEEEECCSCCGGGCCCCCTTHHHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHT
T ss_pred cccccCCccccCCCCCCccCEEEEEeCcccCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHhh
Confidence 445677889999999999999999999999853 7899999999999999999999999999999999999999999999
Q ss_pred hcCCCCceEEEEEecCCCCceeeeeCCccChhhhHHhhccccccccCCCceEEEEecccCCccCCCcee
Q psy15857 85 QDYTDADCFVMAVLTHGEDGILHAKDVPYKPKNLWSKFTADNCLTLAGKPKLFFIQACQGDKLDAGVTI 153 (455)
Q Consensus 85 ~d~~~~d~~vvvilSHG~~g~I~g~D~~v~~~~I~~~F~~~~c~~L~gKPKlFfiQACRG~~~d~gv~~ 153 (455)
++|..+|||||||||||.+|.|||+|+.|++++|+++|++.+||+|+|||||||||||||++.|.|+..
T Consensus 106 ~dh~~~dc~vvvilSHG~~g~I~g~D~~v~l~~I~~~F~~~~CpsL~gKPKlFfIQACRG~~~d~Gv~~ 174 (179)
T 3p45_A 106 VSHADADCFVCVFLSHGEGNHIYAYDAKIEIQTLTGLFKGDKCHSLVGKPKIFIIQACRGNQHDVPVIP 174 (179)
T ss_dssp SCCTTBSCEEEEEESCEETTEEECSSSEEEHHHHHGGGSGGGCGGGTTSCEEEEEECC-----------
T ss_pred hhcCCCCEEEEEEeccCCCCEEEEECCEEEHHHHHHhcccccChhhCCCCcEEEEECCCCCCCCCCccC
Confidence 999999999999999999999999999999999999999999999999999999999999999999854
No 14
>2dko_A Caspase-3; low barrier hydrogen bond, caspase, drug design, radiation D tetrahedral intermediate, protease; 1.06A {Homo sapiens} PDB: 1nme_A 2h5i_A 2h5j_A 2h65_A 2xyg_A* 2xyh_A 2xyp_A* 2xzd_A 2xzt_A 2y0b_A 3edq_A 1gfw_A 1re1_A* 1pau_A* 1rhk_A* 1rhm_A* 1rhq_A* 1rhr_A* 1rhu_A* 1rhj_A* ...
Probab=100.00 E-value=3.2e-44 Score=323.04 Aligned_cols=140 Identities=36% Similarity=0.635 Sum_probs=134.6
Q ss_pred CCCceeCCCCceeEEEEEeCCCCCCC-CCCCCCChHHhHHHHHHHHHhCCcEEEEecCCCHHHHHHHHHHHHhhcCCCCc
Q psy15857 13 DADYYRMDHKHRGLALIFNHEHFDSP-HLKSRAGTGADFENLYTTLVNLGFVVKPYHDPEFKVIQNAIDEAAEQDYTDAD 91 (455)
Q Consensus 13 ~~~~Y~m~~~~~G~aLIInN~~F~~~-~l~~R~Gs~~D~~~L~~~F~~LGF~V~~~~nlt~~em~~~l~~~s~~d~~~~d 91 (455)
..+.|+|+++|+|+||||||.+|... .+++|.||+.|+++|+++|++|||+|++++|+|++||.+.|++|++++|..+|
T Consensus 5 ~~~~Y~m~~~~rG~alIinn~~F~~~~~l~~R~Gt~~D~~~L~~~f~~LgF~V~~~~dlt~~em~~~l~~~~~~dh~~~d 84 (146)
T 2dko_A 5 LDNSYKMDYPEMGLCIIINNKNFHKSTGMTSRSGTDVDAANLRETFRNLKYEVRNKNDLTREEIVELMRDVSKEDHSKRS 84 (146)
T ss_dssp CCCBCCCCSSEEEEEEEEECCCCCGGGTCCCCTTHHHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHSCCTTEE
T ss_pred cccCccCCCCCceEEEEEeccccCCCCCcccCCCCHHHHHHHHHHHHHCCCEEEEeeCCCHHHHHHHHHHHHHhhcCCCC
Confidence 35789999999999999999999863 68999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEEecCCCCceeeeeCCccChhhhHHhhccccccccCCCceEEEEecccCCccCCCce
Q psy15857 92 CFVMAVLTHGEDGILHAKDVPYKPKNLWSKFTADNCLTLAGKPKLFFIQACQGDKLDAGVT 152 (455)
Q Consensus 92 ~~vvvilSHG~~g~I~g~D~~v~~~~I~~~F~~~~c~~L~gKPKlFfiQACRG~~~d~gv~ 152 (455)
||||+|||||.+|.|||+|+.+++++|+++|++++||+|+|||||||||||||++.|.|++
T Consensus 85 c~vv~ilSHG~~g~i~g~D~~~~l~~i~~~F~~~~CpsL~gKPKlffiQACRG~~~d~gv~ 145 (146)
T 2dko_A 85 SFVCVLLSHGEEGIIFGTNGPVDLKKITNFFRGDRCRSLTGKPKLFIIQACRGTELDCGIE 145 (146)
T ss_dssp EEEEEEESCEETTEEEETTEEEEHHHHHHTTSTTTCGGGTTSCEEEEEESCCSSBCBCCCC
T ss_pred eEEEEeccCCCCCEEEEeCCcEeHHHHHHHhccccChhhcCCCeEEEEECCCCCCCcCCcc
Confidence 9999999999999999999999999999999999999999999999999999999999874
No 15
>2ql9_A Caspase-7; cysteine protease, apoptosis, thiol protease, zymogen, hydro hydrolase inhibitor complex; HET: CIT; 2.14A {Homo sapiens} PDB: 2ql7_A* 2ql5_A* 2qlb_A* 2qlf_A 2qlj_A* 3edr_A 3ibc_A 3ibf_A 1i51_A
Probab=100.00 E-value=2.6e-43 Score=324.66 Aligned_cols=142 Identities=38% Similarity=0.647 Sum_probs=134.0
Q ss_pred ccCCCCceeCCCCceeEEEEEeCCCCCC-CCCCCCCChHHhHHHHHHHHHhCCcEEEEecCCCHHHHHHHHHHHHhhcCC
Q psy15857 10 VEKDADYYRMDHKHRGLALIFNHEHFDS-PHLKSRAGTGADFENLYTTLVNLGFVVKPYHDPEFKVIQNAIDEAAEQDYT 88 (455)
Q Consensus 10 ~~~~~~~Y~m~~~~~G~aLIInN~~F~~-~~l~~R~Gs~~D~~~L~~~F~~LGF~V~~~~nlt~~em~~~l~~~s~~d~~ 88 (455)
...+.+.|+|+++++|+||||||.+|.. ..+..|.||+.|+++|+++|++|||+|++++|+|++||.+.|+++++++|.
T Consensus 30 ~~~p~~~Y~m~~~~rG~aLIInn~~F~~~~~l~~R~Gt~~D~~~L~~~F~~LgF~V~v~~dlt~~em~~~l~~~s~~dh~ 109 (173)
T 2ql9_A 30 DRVPTYQYNMNFEKLGKCIIINNKNFDKVTGMGVRNGTDKDAEALFKCFRSLGFDVIVYNDCSCAKMQDLLKKASEEDHT 109 (173)
T ss_dssp ----CCBCCCCSSEEEEEEEEECCCCCGGGCCCCCTTHHHHHHHHHHHHHHHTEEEEEEESCCHHHHHHHHHHHHTSCCT
T ss_pred CCCcccccccCCCCceEEEEEeccccCCCCCCCCCCCcHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHhhcc
Confidence 3445789999999999999999999986 368999999999999999999999999999999999999999999999999
Q ss_pred CCceEEEEEecCCCCceeeeeCCccChhhhHHhhccccccccCCCceEEEEecccCCccCCCc
Q psy15857 89 DADCFVMAVLTHGEDGILHAKDVPYKPKNLWSKFTADNCLTLAGKPKLFFIQACQGDKLDAGV 151 (455)
Q Consensus 89 ~~d~~vvvilSHG~~g~I~g~D~~v~~~~I~~~F~~~~c~~L~gKPKlFfiQACRG~~~d~gv 151 (455)
.+|||||||||||.+|.|||+|+.+++++|+++|++.+||+|+|||||||||||||++.|.|+
T Consensus 110 ~~dc~vvvilSHG~~g~I~g~D~~~~i~~I~~~F~~~~CpsL~gKPKlFfIQACRG~~~d~Gv 172 (173)
T 2ql9_A 110 NAACFACILLSHGEENVIYGKDGVTPIKDLTAHFRGDRCKTLLEKPKLFFIQACRGTELDDGI 172 (173)
T ss_dssp TEEEEEEEEESCEETTEEEETTEEEEHHHHHGGGSTTTCGGGTTSCEEEEEESCCSSBCBCCB
T ss_pred CCCeEEEeecCCCCCCEEEEcCCcEEHHHHHHHcCcccChhHcCCCeEEEEECCCCCCccCCC
Confidence 999999999999999999999999999999999999999999999999999999999999886
No 16
>1qtn_A Caspase-8; apoptosis, dithiane-DIOL, caspase, cysteine-protease, hydrol hydrolase inhibitor complex; 1.20A {Homo sapiens} SCOP: c.17.1.1 PDB: 3kjn_A* 3kjq_A* 2y1l_A 2c2z_A 1qdu_A* 1f9e_A*
Probab=100.00 E-value=3.8e-43 Score=321.83 Aligned_cols=144 Identities=37% Similarity=0.616 Sum_probs=134.2
Q ss_pred ccCCCCceeCCCCceeEEEEEeCCCCCCC--------CCCCCCChHHhHHHHHHHHHhCCcEEEEecCCCHHHHHHHHHH
Q psy15857 10 VEKDADYYRMDHKHRGLALIFNHEHFDSP--------HLKSRAGTGADFENLYTTLVNLGFVVKPYHDPEFKVIQNAIDE 81 (455)
Q Consensus 10 ~~~~~~~Y~m~~~~~G~aLIInN~~F~~~--------~l~~R~Gs~~D~~~L~~~F~~LGF~V~~~~nlt~~em~~~l~~ 81 (455)
.+...+.|+|+++|+|+||||||.+|... .+..|.||++|+++|+++|++|||+|+++.|+|++||.+.|++
T Consensus 9 ~~~~~~~Y~m~~~~rG~~LIinn~~F~~~~~~~~~~~~l~~R~Gt~~D~~~L~~~f~~LgF~V~~~~dlt~~em~~~l~~ 88 (164)
T 1qtn_A 9 SQTLDKVYQMKSKPRGYCLIINNHNFAKAREKVPKLHSIRDRNGTHLDAGALTTTFEELHFEIKPHDDCTVEQIYEILKI 88 (164)
T ss_dssp ----CCBCCCCCSSCCEEEEEECCCCHHHHHHCGGGTTCCCCTTHHHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHH
T ss_pred cccccccccCCCCCceEEEEEechhcCCccccccccccCcCCCCcHHHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHH
Confidence 34567889999999999999999999852 4889999999999999999999999999999999999999999
Q ss_pred HHhhcCCCCceEEEEEecCCCCceeeeeCCc-cChhhhHHhhccccccccCCCceEEEEecccCCccCCCcee
Q psy15857 82 AAEQDYTDADCFVMAVLTHGEDGILHAKDVP-YKPKNLWSKFTADNCLTLAGKPKLFFIQACQGDKLDAGVTI 153 (455)
Q Consensus 82 ~s~~d~~~~d~~vvvilSHG~~g~I~g~D~~-v~~~~I~~~F~~~~c~~L~gKPKlFfiQACRG~~~d~gv~~ 153 (455)
|++++|..+|||||||||||.+|.|||+|+. +++++|+++|++.+||+|+|||||||||||||++.+.|+.+
T Consensus 89 ~~~~dh~~~dc~vv~ilSHG~~g~i~g~D~~~v~i~~i~~~F~~~~CpsL~gKPKlFfiQACRG~~~d~gv~~ 161 (164)
T 1qtn_A 89 YQLMDHSNMDCFICCILSHGDKGIIYGTDGQEAPIYELTSQFTGLKCPSLAGKPKVFFIQACQGDNYQKGIPV 161 (164)
T ss_dssp HHHSCCTTCSCEEEEEESCEETTEEECTTSCEEEHHHHHGGGSTTTCGGGTTSCEEEEEESCSSSBCBCCCCC
T ss_pred HHHhhccCCCEEEEEeCCCCCCCEEEeeCCCEeeHHHHHHHhccccChhhcCCCeEEEEECCCCCCccCCccC
Confidence 9999999999999999999999999999996 99999999999999999999999999999999999998753
No 17
>1pyo_A Caspase-2; apoptosis, caspase, alpha-beta, thiol protease, hydrolase-HY inhibitor complex; 1.65A {Homo sapiens} SCOP: c.17.1.1 PDB: 3rjm_A* 2p2c_A 3r5j_A 3r6g_A 3r6l_A 3r7b_A 3r7n_A 3r7s_A
Probab=100.00 E-value=1.3e-42 Score=319.08 Aligned_cols=141 Identities=33% Similarity=0.554 Sum_probs=134.8
Q ss_pred CCCceeCCCCceeEEEEEeCCCCCC-CCCCCCCChHHhHHHHHHHHHhCCcEEEEecCCCHHHHHHHHHHHHh-hcCCCC
Q psy15857 13 DADYYRMDHKHRGLALIFNHEHFDS-PHLKSRAGTGADFENLYTTLVNLGFVVKPYHDPEFKVIQNAIDEAAE-QDYTDA 90 (455)
Q Consensus 13 ~~~~Y~m~~~~~G~aLIInN~~F~~-~~l~~R~Gs~~D~~~L~~~F~~LGF~V~~~~nlt~~em~~~l~~~s~-~d~~~~ 90 (455)
..+.|+|+++++|+||||||.+|.. ..+..|.||+.|+++|+++|++|||+|+++.|+|++||.+.|++|++ ++|..+
T Consensus 22 ~~~~Y~m~~~~rG~aLIinn~~F~~~~~l~~R~Gt~~D~~~L~~~f~~LgF~V~~~~dlt~~em~~~l~~~~~~~dh~~~ 101 (167)
T 1pyo_A 22 FQLAYRLQSRPRGLALVLSNVHFTGEKELEFRSGGDVDHSTLVTLFKLLGYDVHVLCDQTAQEMQEKLQNFAQLPAHRVT 101 (167)
T ss_dssp GGGBCCCCCSSSEEEEEEECCCCCSSSCSCCCTTHHHHHHHHHHHHHHTTEEEEEEESCCHHHHHHHHHHHHTCGGGGTS
T ss_pred ccccccCCCCCceEEEEEeCcccCCCCCCccCCCcHHHHHHHHHHHHHCCCEEEEeeCCCHHHHHHHHHHhhhhhhccCC
Confidence 3578999999999999999999986 36899999999999999999999999999999999999999999998 789999
Q ss_pred ceEEEEEecCCCCceeeeeCCc-cChhhhHHhhccccccccCCCceEEEEecccCCccCCCcee
Q psy15857 91 DCFVMAVLTHGEDGILHAKDVP-YKPKNLWSKFTADNCLTLAGKPKLFFIQACQGDKLDAGVTI 153 (455)
Q Consensus 91 d~~vvvilSHG~~g~I~g~D~~-v~~~~I~~~F~~~~c~~L~gKPKlFfiQACRG~~~d~gv~~ 153 (455)
|||||||||||.+|.|||+|+. |++++|+++|++++||+|+|||||||||||||++.+.|+.+
T Consensus 102 dc~vv~ilSHG~~g~i~g~D~~~v~l~~i~~~F~~~~CpsL~gKPKlffiQACRG~~~d~Gv~~ 165 (167)
T 1pyo_A 102 DSCIVALLSHGVEGAIYGVDGKLLQLQEVFQLFDNANCPSLQNKPKMFFIQACRGDETDRGVDQ 165 (167)
T ss_dssp SEEEEEEESCEETTEEECTTSCEEEHHHHHHHTSTTTCGGGTTSCEEEEEESCSSSBCBCCEEC
T ss_pred CEEEEEeCCCCCCCeEEEeCCCEEcHHHHHHHhcccCChhHcCCCeEEEEECCCCCCCCCCccC
Confidence 9999999999999999999996 99999999999999999999999999999999999999864
No 18
>2h54_A Caspase-1; allosteric site, dimer interface, hydrolase; HET: PHQ; 1.80A {Homo sapiens} PDB: 1rwm_A* 1rwk_A* 1rwo_A* 1rwp_A* 1rwv_A* 1rww_A* 1rwn_A* 2h48_A* 2h4w_A* 1rwx_A* 2hbq_A* 2hby_A* 1ibc_A 3d6m_A* 2h4y_A* 2h51_A* 3d6f_A* 3d6h_A* 2hbz_A* 2hbr_A* ...
Probab=100.00 E-value=5.7e-38 Score=291.09 Aligned_cols=139 Identities=26% Similarity=0.431 Sum_probs=128.1
Q ss_pred ccccCCCCceeCCCCc--eeEEEEEeCCCCCCCCCCCCCChHHhHHHHHHHHHhCCcEEEEecCCCHHHHHHHHHHHHh-
Q psy15857 8 STVEKDADYYRMDHKH--RGLALIFNHEHFDSPHLKSRAGTGADFENLYTTLVNLGFVVKPYHDPEFKVIQNAIDEAAE- 84 (455)
Q Consensus 8 ~~~~~~~~~Y~m~~~~--~G~aLIInN~~F~~~~l~~R~Gs~~D~~~L~~~F~~LGF~V~~~~nlt~~em~~~l~~~s~- 84 (455)
++.++..+.|+|++++ +|+||||||.+|. .+..|.|+++|+++|+++|++|||+|+++.|+|.+||.+.|++|++
T Consensus 25 ~~~~~~~~~Y~m~~~~~~~g~ALIInn~~f~--~~~~R~G~~~Da~~L~~~f~~LgF~V~~~~dlt~~em~~~l~~f~~~ 102 (178)
T 2h54_A 25 IWKQKSAEIYPIMDKSSRTRLALIICNEEFD--SIPRRTGAEVDITGMTMLLQNLGYSVDVKKNLTASDMTTELEAFAHR 102 (178)
T ss_dssp HC---CCSBCCCCCTTTCCCEEEEEECCCCS--SSCCCTTHHHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHTC
T ss_pred ccccCcccccCCCCCCCcCCEEEEEehhhcC--CCccCCCCHHHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhh
Confidence 4566788999999865 9999999999997 6899999999999999999999999999999999999999999986
Q ss_pred hcCCCCceEEEEEecCCCCceeeeeCC------ccChhhhHHhhccccccccCCCceEEEEecccCCccC
Q psy15857 85 QDYTDADCFVMAVLTHGEDGILHAKDV------PYKPKNLWSKFTADNCLTLAGKPKLFFIQACQGDKLD 148 (455)
Q Consensus 85 ~d~~~~d~~vvvilSHG~~g~I~g~D~------~v~~~~I~~~F~~~~c~~L~gKPKlFfiQACRG~~~d 148 (455)
.+|+.+||++|+|||||.+|.|||+|+ .|++++|+++|++.+||+|++||||||||||||++..
T Consensus 103 ~d~~~~d~~v~~~lsHG~~g~i~g~D~~~~~~~~v~l~~I~~~f~~~~CpsL~gKPKlffiqACRg~~~g 172 (178)
T 2h54_A 103 PEHKTSDSTFLVFMSHGIREGICGKKHSEQVPDILQLNAIFNMLNTKNCPSLKDKPKVIIIQACRGDSPG 172 (178)
T ss_dssp GGGGGCSCEEEEEESCBCSSCEECTTCCSSSCCEECHHHHHHHHSTTTCGGGTTSCEEEEEESCSSSBCC
T ss_pred hhcCCCCEEEEEEecCCCCCeEEeecCCcccCcEEEHHHHHHHHhhcCChhhcCCceEEEEECCCCCCCC
Confidence 579999999999999999999999998 4999999999999999999999999999999998743
No 19
>3uoa_B Mucosa-associated lymphoid tissue lymphoma transl protein 1; paracaspase, lymphoma, NF-KB signalling, caspase fold, immun fold, hydrolase-hydrolase inhibitor complex; 1.75A {Homo sapiens} PDB: 3uo8_B 3v55_A 3v4l_A* 3v4o_A*
Probab=99.96 E-value=2.7e-29 Score=257.59 Aligned_cols=187 Identities=16% Similarity=0.190 Sum_probs=150.9
Q ss_pred ceeEEEEEeCCCCCCCCCCCCCChHHhHHHHHHHHHhCCcEEEEecCCCHHHHHHHHHHHHhhcCCCCceEEEEEecCCC
Q psy15857 23 HRGLALIFNHEHFDSPHLKSRAGTGADFENLYTTLVNLGFVVKPYHDPEFKVIQNAIDEAAEQDYTDADCFVMAVLTHGE 102 (455)
Q Consensus 23 ~~G~aLIInN~~F~~~~l~~R~Gs~~D~~~L~~~F~~LGF~V~~~~nlt~~em~~~l~~~s~~d~~~~d~~vvvilSHG~ 102 (455)
.+++||||+|.+|. ..+++.|+.+|+++|+++|+++||+|.+..|+|+++|.+.|++|++.. ...||++|+|+|||.
T Consensus 4 ~~r~ALIIGn~~Y~--~~~~L~ga~~DA~~L~~~L~~lGF~V~~l~DlT~~eI~~aL~~f~~~~-~~~D~~l~yfsGHG~ 80 (390)
T 3uoa_B 4 KDKVALLIGNMNYR--EHPKLKAPLVDVYELTNLLRQLDFKVVSLLDLTEYEMRNAVDEFLLLL-DKGVYGLLYYAGHGY 80 (390)
T ss_dssp SCEEEEEEECCCCS--SSCCCSTHHHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTC-CTTCEEEEEEESCEE
T ss_pred CCCEEEEEEecCCC--CcccCCChHHHHHHHHHHHHHcCCeEEEeecCCHHHHHHHHHHHHhhC-CCCCEEEEEEecCcc
Confidence 57999999999998 467889999999999999999999999999999999999999999865 456999999999997
Q ss_pred C----ceeeeeCCc--------cChhhhHHhhccccccccCCCceEEEEecccCC-ccCCCceeeeccCCCCCCCcCCCC
Q psy15857 103 D----GILHAKDVP--------YKPKNLWSKFTADNCLTLAGKPKLFFIQACQGD-KLDAGVTIRTQVDGHPSNTYSIPL 169 (455)
Q Consensus 103 ~----g~I~g~D~~--------v~~~~I~~~F~~~~c~~L~gKPKlFfiQACRG~-~~d~gv~~~~~~d~~~~~~~~iP~ 169 (455)
+ +.+++.|+. +++++|++.|.. +.+||||||||||||. ..+.++ + ....+|.
T Consensus 81 ~~~g~~yL~p~Da~~~~~~~~~isl~~Ll~~l~~-----~~~K~kL~ILDACrg~~~~~~~~------~----~~~~ip~ 145 (390)
T 3uoa_B 81 ENFGNSFMVPVDAPNPYRSENCLCVQNILKLMQE-----KETGLNVFLLDMCRKRNDYDDTI------P----ILDALKV 145 (390)
T ss_dssp EETTEEEECCTTCCSSCCGGGSEEHHHHHHHHHH-----TTCSEEEEEEESCCCCCTTCCCC------C----CCCCCCC
T ss_pred ccCCcceEEecCCCccccccceeeHHHHHHHHHh-----cCCCceEEEEECCCCCCcccccc------c----ccccCcc
Confidence 5 577888863 789999999874 5899999999999984 443321 1 2246788
Q ss_pred CCCEEEEEccCCCCccccC-------chhHHHHHHHHhHh-HHHHhhhcccCCCC--ccccccccccc
Q psy15857 170 HADFLMAYSTISDSPMFGQ-------RFGLKDKCSKVVSK-TYQVMSSNVDTSNG--ECQTDGHESHT 227 (455)
Q Consensus 170 ~aD~Li~yST~pG~vS~R~-------~~fIq~Lc~~~~~~-~~~~m~~~~~~~~~--e~~~~~~~~~~ 227 (455)
.+|+|++|||.||++|||+ .||||+||+.|.+. .+..|..+|++.+. +-....|.|+.
T Consensus 146 ~ad~Li~yAT~pG~~A~r~~~d~~~gS~FtqaL~e~L~~~~dl~~LLt~Vn~~Va~~~~~~~KQ~P~~ 213 (390)
T 3uoa_B 146 TANIVFGYATCQGAEAFEIQHSGLANGIFMKFLKDRLLEDKKITVLLDEVAEDMGKCHLTKGKQALEI 213 (390)
T ss_dssp CSCEEEEESSCTTCCCEECSSCTTCCCHHHHHHTTTTTCSSCHHHHHHHHHHHHTTCTTTTTTCCCEE
T ss_pred cCCcEEEEEcCCCcEeeecCCCCCCCCHHHHHHHHHHccCCCHHHHHHHHHHHHhhccccCCcccCcc
Confidence 9999999999999999995 38999999988763 13345555665554 22233456654
No 20
>3p45_A Caspase-6; protease, huntington'S disease, physio PH, competitive inhibition, hydrolase; 2.53A {Homo sapiens}
Probab=99.92 E-value=2.2e-26 Score=212.77 Aligned_cols=133 Identities=27% Similarity=0.364 Sum_probs=115.5
Q ss_pred CcccccccCccccccCCCCcceEEEEEeCCCCCCC-CCCCCCCChHhHHHHHHHHhhcCCEEEEecCccHHHHHHHhhcC
Q psy15857 278 PVAKSTVEKDADYYRMDHKHRGLALIFNHEHFDSP-HLKSRAGTGADFENLYTTLVNLGFVVKPYHDPEFKVIQNAIDEG 356 (455)
Q Consensus 278 ~~a~~~~~~~~~~Y~m~~~~rG~~lI~n~~~F~~~-~l~~R~Gt~~D~~~l~~~~~~Lgf~V~~~~d~~~~~i~~~l~k~ 356 (455)
..++||+.++++.|+|+|+|||+||||||++|+.. .|++|.||++|+++|+++|++|||+|++|+|||++||.++|+
T Consensus 24 ~~~~~~~~~~~~~Y~m~~~~rG~aLIinn~~F~~~~~l~~R~Gt~~D~~~L~~~F~~LGF~V~~~~dlt~~em~~~l~-- 101 (179)
T 3p45_A 24 AFYKREMFDPAEKYKMDHRRRGIALIFNHERFFWHLTLPERRGTCADRDNLTRRFSDLGFEVKCFNDLKAEELLLKIH-- 101 (179)
T ss_dssp -------CCTTCBCCCCSSBCCEEEEEECCSCCGGGCCCCCTTHHHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHH--
T ss_pred cccccccCCccccCCCCCCccCEEEEEeCcccCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHH--
Confidence 45888999999999999999999999999999864 799999999999999999999999999999999999999998
Q ss_pred CCcccccccccccccCCCCcccEEEEEEeccCCCCCCCCCCCcHHhHHHHHHHHHhcCCeEEEecCCCH
Q psy15857 357 PVAKSTVEKDADYYRMDHKHRGLALIFNHEHFDSPHLKSRAGTGADFENLYTTLVNLGFVVKPYHDPEF 425 (455)
Q Consensus 357 ~~~~s~~~~~~~~Y~m~~~~~g~~lIin~~~F~~~~l~~R~Gs~~D~e~L~~~F~~LgF~V~~~~dlt~ 425 (455)
+..+.+|...+|++++.++|+..+.++..+|. ++++.|.+.|+.-. |+.+.++|+.
T Consensus 102 -----------~~~~~dh~~~dc~vvvilSHG~~g~I~g~D~~-v~l~~I~~~F~~~~-CpsL~gKPKl 157 (179)
T 3p45_A 102 -----------EVSTVSHADADCFVCVFLSHGEGNHIYAYDAK-IEIQTLTGLFKGDK-CHSLVGKPKI 157 (179)
T ss_dssp -----------HHHTSCCTTBSCEEEEEESCEETTEEECSSSE-EEHHHHHGGGSGGG-CGGGTTSCEE
T ss_pred -----------HHhhhhcCCCCEEEEEEeccCCCCEEEEECCE-EEHHHHHHhccccc-ChhhCCCCcE
Confidence 34567899999999999999999889999999 99999999998766 5666666664
No 21
>2dko_A Caspase-3; low barrier hydrogen bond, caspase, drug design, radiation D tetrahedral intermediate, protease; 1.06A {Homo sapiens} PDB: 1nme_A 2h5i_A 2h5j_A 2h65_A 2xyg_A* 2xyh_A 2xyp_A* 2xzd_A 2xzt_A 2y0b_A 3edq_A 1gfw_A 1re1_A* 1pau_A* 1rhk_A* 1rhm_A* 1rhq_A* 1rhr_A* 1rhu_A* 1rhj_A* ...
Probab=99.90 E-value=1.2e-24 Score=195.49 Aligned_cols=123 Identities=24% Similarity=0.322 Sum_probs=110.1
Q ss_pred cccccCCCCcceEEEEEeCCCCCCC-CCCCCCCChHhHHHHHHHHhhcCCEEEEecCccHHHHHHHhhcCCCcccccccc
Q psy15857 288 ADYYRMDHKHRGLALIFNHEHFDSP-HLKSRAGTGADFENLYTTLVNLGFVVKPYHDPEFKVIQNAIDEGPVAKSTVEKD 366 (455)
Q Consensus 288 ~~~Y~m~~~~rG~~lI~n~~~F~~~-~l~~R~Gt~~D~~~l~~~~~~Lgf~V~~~~d~~~~~i~~~l~k~~~~~s~~~~~ 366 (455)
++.|+|+++|||+||||||++|+.+ +|++|.||++|+++|+++|++|||+|++|+|+|++||.+.|+
T Consensus 6 ~~~Y~m~~~~rG~alIinn~~F~~~~~l~~R~Gt~~D~~~L~~~f~~LgF~V~~~~dlt~~em~~~l~------------ 73 (146)
T 2dko_A 6 DNSYKMDYPEMGLCIIINNKNFHKSTGMTSRSGTDVDAANLRETFRNLKYEVRNKNDLTREEIVELMR------------ 73 (146)
T ss_dssp CCBCCCCSSEEEEEEEEECCCCCGGGTCCCCTTHHHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHH------------
T ss_pred ccCccCCCCCceEEEEEeccccCCCCCcccCCCCHHHHHHHHHHHHHCCCEEEEeeCCCHHHHHHHHH------------
Confidence 3679999999999999999999864 799999999999999999999999999999999999999998
Q ss_pred cccccCCCCcccEEEEEEeccCCCCCCCCCCCcHHhHHHHHHHHHhcCCeEEEecCCCH
Q psy15857 367 ADYYRMDHKHRGLALIFNHEHFDSPHLKSRAGTGADFENLYTTLVNLGFVVKPYHDPEF 425 (455)
Q Consensus 367 ~~~Y~m~~~~~g~~lIin~~~F~~~~l~~R~Gs~~D~e~L~~~F~~LgF~V~~~~dlt~ 425 (455)
...+.+|...+|++++.++|+..+.++..+| .++++.|.+.|+.-. |+.+.++|+.
T Consensus 74 -~~~~~dh~~~dc~vv~ilSHG~~g~i~g~D~-~~~l~~i~~~F~~~~-CpsL~gKPKl 129 (146)
T 2dko_A 74 -DVSKEDHSKRSSFVCVLLSHGEEGIIFGTNG-PVDLKKITNFFRGDR-CRSLTGKPKL 129 (146)
T ss_dssp -HHHHSCCTTEEEEEEEEESCEETTEEEETTE-EEEHHHHHHTTSTTT-CGGGTTSCEE
T ss_pred -HHHHhhcCCCCeEEEEeccCCCCCEEEEeCC-cEeHHHHHHHhcccc-ChhhcCCCeE
Confidence 4556789999999999999999888999999 799999999997665 5666666653
No 22
>1qtn_A Caspase-8; apoptosis, dithiane-DIOL, caspase, cysteine-protease, hydrol hydrolase inhibitor complex; 1.20A {Homo sapiens} SCOP: c.17.1.1 PDB: 3kjn_A* 3kjq_A* 2y1l_A 2c2z_A 1qdu_A* 1f9e_A*
Probab=99.89 E-value=2.7e-24 Score=196.73 Aligned_cols=125 Identities=26% Similarity=0.337 Sum_probs=111.8
Q ss_pred ccccccCCCCcceEEEEEeCCCCCCC--------CCCCCCCChHhHHHHHHHHhhcCCEEEEecCccHHHHHHHhhcCCC
Q psy15857 287 DADYYRMDHKHRGLALIFNHEHFDSP--------HLKSRAGTGADFENLYTTLVNLGFVVKPYHDPEFKVIQNAIDEGPV 358 (455)
Q Consensus 287 ~~~~Y~m~~~~rG~~lI~n~~~F~~~--------~l~~R~Gt~~D~~~l~~~~~~Lgf~V~~~~d~~~~~i~~~l~k~~~ 358 (455)
..+.|+|+++|||+||||||++|+.. .|+.|.||++|+++|+++|++|||+|++|+|+|++||.+.|+
T Consensus 12 ~~~~Y~m~~~~rG~~LIinn~~F~~~~~~~~~~~~l~~R~Gt~~D~~~L~~~f~~LgF~V~~~~dlt~~em~~~l~---- 87 (164)
T 1qtn_A 12 LDKVYQMKSKPRGYCLIINNHNFAKAREKVPKLHSIRDRNGTHLDAGALTTTFEELHFEIKPHDDCTVEQIYEILK---- 87 (164)
T ss_dssp -CCBCCCCCSSCCEEEEEECCCCHHHHHHCGGGTTCCCCTTHHHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHH----
T ss_pred ccccccCCCCCceEEEEEechhcCCccccccccccCcCCCCcHHHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHH----
Confidence 45679999999999999999999842 599999999999999999999999999999999999999998
Q ss_pred cccccccccccccCCCCcccEEEEEEeccCCCCCCCCCCCcHHhHHHHHHHHHhcCCeEEEecCCCH
Q psy15857 359 AKSTVEKDADYYRMDHKHRGLALIFNHEHFDSPHLKSRAGTGADFENLYTTLVNLGFVVKPYHDPEF 425 (455)
Q Consensus 359 ~~s~~~~~~~~Y~m~~~~~g~~lIin~~~F~~~~l~~R~Gs~~D~e~L~~~F~~LgF~V~~~~dlt~ 425 (455)
....++|...+|++++.++|+..+.+++.+|..++++.|.+.|.... |+.+.++|+.
T Consensus 88 ---------~~~~~dh~~~dc~vv~ilSHG~~g~i~g~D~~~v~i~~i~~~F~~~~-CpsL~gKPKl 144 (164)
T 1qtn_A 88 ---------IYQLMDHSNMDCFICCILSHGDKGIIYGTDGQEAPIYELTSQFTGLK-CPSLAGKPKV 144 (164)
T ss_dssp ---------HHHHSCCTTCSCEEEEEESCEETTEEECTTSCEEEHHHHHGGGSTTT-CGGGTTSCEE
T ss_pred ---------HHHHhhccCCCEEEEEeCCCCCCCEEEeeCCCEeeHHHHHHHhcccc-ChhhcCCCeE
Confidence 45667899999999999999998889999999899999999997755 5666666654
No 23
>2ql9_A Caspase-7; cysteine protease, apoptosis, thiol protease, zymogen, hydro hydrolase inhibitor complex; HET: CIT; 2.14A {Homo sapiens} PDB: 2ql7_A* 2ql5_A* 2qlb_A* 2qlf_A 2qlj_A* 3edr_A 3ibc_A 3ibf_A 1i51_A
Probab=99.89 E-value=4.1e-24 Score=196.76 Aligned_cols=123 Identities=21% Similarity=0.320 Sum_probs=110.3
Q ss_pred cccccCCCCcceEEEEEeCCCCCCC-CCCCCCCChHhHHHHHHHHhhcCCEEEEecCccHHHHHHHhhcCCCcccccccc
Q psy15857 288 ADYYRMDHKHRGLALIFNHEHFDSP-HLKSRAGTGADFENLYTTLVNLGFVVKPYHDPEFKVIQNAIDEGPVAKSTVEKD 366 (455)
Q Consensus 288 ~~~Y~m~~~~rG~~lI~n~~~F~~~-~l~~R~Gt~~D~~~l~~~~~~Lgf~V~~~~d~~~~~i~~~l~k~~~~~s~~~~~ 366 (455)
+..|+|+++|||+||||||++|+.. +|+.|.||++|+++|+++|++|||+|++|+|+|++||.+.|+
T Consensus 34 ~~~Y~m~~~~rG~aLIInn~~F~~~~~l~~R~Gt~~D~~~L~~~F~~LgF~V~v~~dlt~~em~~~l~------------ 101 (173)
T 2ql9_A 34 TYQYNMNFEKLGKCIIINNKNFDKVTGMGVRNGTDKDAEALFKCFRSLGFDVIVYNDCSCAKMQDLLK------------ 101 (173)
T ss_dssp CCBCCCCSSEEEEEEEEECCCCCGGGCCCCCTTHHHHHHHHHHHHHHHTEEEEEEESCCHHHHHHHHH------------
T ss_pred ccccccCCCCceEEEEEeccccCCCCCCCCCCCcHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHH------------
Confidence 5779999999999999999999864 799999999999999999999999999999999999999998
Q ss_pred cccccCCCCcccEEEEEEeccCCCCCCCCCCCcHHhHHHHHHHHHhcCCeEEEecCCCH
Q psy15857 367 ADYYRMDHKHRGLALIFNHEHFDSPHLKSRAGTGADFENLYTTLVNLGFVVKPYHDPEF 425 (455)
Q Consensus 367 ~~~Y~m~~~~~g~~lIin~~~F~~~~l~~R~Gs~~D~e~L~~~F~~LgF~V~~~~dlt~ 425 (455)
...+++|...+|++++.++|+..+.++..+|. ++++.|...|..-. |+.+.++|+.
T Consensus 102 -~~s~~dh~~~dc~vvvilSHG~~g~I~g~D~~-~~i~~I~~~F~~~~-CpsL~gKPKl 157 (173)
T 2ql9_A 102 -KASEEDHTNAACFACILLSHGEENVIYGKDGV-TPIKDLTAHFRGDR-CKTLLEKPKL 157 (173)
T ss_dssp -HHHTSCCTTEEEEEEEEESCEETTEEEETTEE-EEHHHHHGGGSTTT-CGGGTTSCEE
T ss_pred -HHHHhhccCCCeEEEeecCCCCCCEEEEcCCc-EEHHHHHHHcCccc-ChhHcCCCeE
Confidence 45567899999999999999998889999995 89999999997755 4666666653
No 24
>2nn3_C Caspase-1; cysteine protease, hydrolase; 3.00A {Spodoptera frugiperda}
Probab=99.89 E-value=5.4e-24 Score=213.00 Aligned_cols=140 Identities=36% Similarity=0.519 Sum_probs=107.3
Q ss_pred cCCCCCCccccccCccccCCCcccccccCccccccCCCCcceEEEEEeCCCCCCCCCCCCCCChHhHHHHHHHHhhcCCE
Q psy15857 258 VGKDEGDVLGFNFGRTRMKGPVAKSTVEKDADYYRMDHKHRGLALIFNHEHFDSPHLKSRAGTGADFENLYTTLVNLGFV 337 (455)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~Y~m~~~~rG~~lI~n~~~F~~~~l~~R~Gt~~D~~~l~~~~~~Lgf~ 337 (455)
.|+|.+||++. ..+..+.+.|+||.++.++.|+|++++||+||||||++|....|+.|.||++|+++|.++|++|||+
T Consensus 22 ~~~~~~d~~~~--~~~~~~~~~~~~~~~~~~~~Y~m~~~~rg~aLIInN~~F~~~~l~~R~Gt~~Da~~L~~~f~~LGF~ 99 (310)
T 2nn3_C 22 GGGDEGDALGS--NSSSQPNRVARMPVDRNAPYYNMNHKHRGMAIIFNHEHFDIHSLKSRTGTNVDSDNLSKVLKTLGFK 99 (310)
T ss_dssp --------------------------CCSSCSBCCCCSSBCCEEEEEECCCCSSTTCCCCTTHHHHHHHHHHHHHHTTCE
T ss_pred CCCCccccCCC--ccCCCCcceeecccCCccccccCCCCCcCEEEEEechhcCCCCcccCCCCHHHHHHHHHHHHHCCCE
Confidence 35688888766 2334445579999999999999999999999999999998667999999999999999999999999
Q ss_pred EEEecCccHHHHHHHhhcCCCcccccccccccccCCCCcccEEEEEEeccCCCCCCCCCCCcHHhHHHHHHHHHhc
Q psy15857 338 VKPYHDPEFKVIQNAIDEGPVAKSTVEKDADYYRMDHKHRGLALIFNHEHFDSPHLKSRAGTGADFENLYTTLVNL 413 (455)
Q Consensus 338 V~~~~d~~~~~i~~~l~k~~~~~s~~~~~~~~Y~m~~~~~g~~lIin~~~F~~~~l~~R~Gs~~D~e~L~~~F~~L 413 (455)
|+++.|+|++||.+.|+ +..+.+|...+|++++..+|+..+.+++.+| .++++.|...|+.-
T Consensus 100 V~~~~dlt~~em~~~l~-------------~f~~~dh~~~D~~vv~ilSHG~~g~i~g~D~-~v~l~~I~~~f~~~ 161 (310)
T 2nn3_C 100 VTVFPNLKSEEINKFIQ-------------QTAEMDHSDADCLLVAVLTAGELGMLYAKDT-HYKPDNLWYYFTAD 161 (310)
T ss_dssp EEEEESCCHHHHHHHHH-------------HHHSSCGGGBSCEEEEEEEEEETTEEECSSC-EECTHHHHGGGSTT
T ss_pred EEEecCCCHHHHHHHHH-------------HHHHhccCCCCEEEEEEeCCCCCCEEEecCC-cEEHHHHHHHhccc
Confidence 99999999999999998 4556788899999999999998888889998 48899999999753
No 25
>1pyo_A Caspase-2; apoptosis, caspase, alpha-beta, thiol protease, hydrolase-HY inhibitor complex; 1.65A {Homo sapiens} SCOP: c.17.1.1 PDB: 3rjm_A* 2p2c_A 3r5j_A 3r6g_A 3r6l_A 3r7b_A 3r7n_A 3r7s_A
Probab=99.88 E-value=1.4e-23 Score=192.54 Aligned_cols=125 Identities=20% Similarity=0.309 Sum_probs=111.0
Q ss_pred ccccccCCCCcceEEEEEeCCCCCCC-CCCCCCCChHhHHHHHHHHhhcCCEEEEecCccHHHHHHHhhcCCCccccccc
Q psy15857 287 DADYYRMDHKHRGLALIFNHEHFDSP-HLKSRAGTGADFENLYTTLVNLGFVVKPYHDPEFKVIQNAIDEGPVAKSTVEK 365 (455)
Q Consensus 287 ~~~~Y~m~~~~rG~~lI~n~~~F~~~-~l~~R~Gt~~D~~~l~~~~~~Lgf~V~~~~d~~~~~i~~~l~k~~~~~s~~~~ 365 (455)
.++.|+|+++|||+||||||++|+.. .|+.|.||++|+++|+++|++|||+|++|+|+|++||.+.|+
T Consensus 22 ~~~~Y~m~~~~rG~aLIinn~~F~~~~~l~~R~Gt~~D~~~L~~~f~~LgF~V~~~~dlt~~em~~~l~----------- 90 (167)
T 1pyo_A 22 FQLAYRLQSRPRGLALVLSNVHFTGEKELEFRSGGDVDHSTLVTLFKLLGYDVHVLCDQTAQEMQEKLQ----------- 90 (167)
T ss_dssp GGGBCCCCCSSSEEEEEEECCCCCSSSCSCCCTTHHHHHHHHHHHHHHTTEEEEEEESCCHHHHHHHHH-----------
T ss_pred ccccccCCCCCceEEEEEeCcccCCCCCCccCCCcHHHHHHHHHHHHHCCCEEEEeeCCCHHHHHHHHH-----------
Confidence 35789999999999999999999864 799999999999999999999999999999999999999998
Q ss_pred cccccc-CCCCcccEEEEEEeccCCCCCCCCCCCcHHhHHHHHHHHHhcCCeEEEecCCCH
Q psy15857 366 DADYYR-MDHKHRGLALIFNHEHFDSPHLKSRAGTGADFENLYTTLVNLGFVVKPYHDPEF 425 (455)
Q Consensus 366 ~~~~Y~-m~~~~~g~~lIin~~~F~~~~l~~R~Gs~~D~e~L~~~F~~LgF~V~~~~dlt~ 425 (455)
+... .+|...+|++++.++|+..+.+++.+|..++++.|...|+.-. |+.+.++|+.
T Consensus 91 --~~~~~~dh~~~dc~vv~ilSHG~~g~i~g~D~~~v~l~~i~~~F~~~~-CpsL~gKPKl 148 (167)
T 1pyo_A 91 --NFAQLPAHRVTDSCIVALLSHGVEGAIYGVDGKLLQLQEVFQLFDNAN-CPSLQNKPKM 148 (167)
T ss_dssp --HHHTCGGGGTSSEEEEEEESCEETTEEECTTSCEEEHHHHHHHTSTTT-CGGGTTSCEE
T ss_pred --HhhhhhhccCCCEEEEEeCCCCCCCeEEEeCCCEEcHHHHHHHhcccC-ChhHcCCCeE
Confidence 3444 5788899999999999998889999998899999999997655 4555566653
No 26
>3od5_A Caspase-6; caspase domain, apoptotic protease, hydrolase-hydrolase INHI complex; 1.60A {Homo sapiens} SCOP: c.17.1.0 PDB: 3k7e_A 3s70_A 3v6m_A 3v6l_A 3nr2_A 4fxo_A 2wdp_A 3nkf_A 3s8e_A 4ejf_A 3qnw_A* 3p4u_A* 3p45_B 3qnw_B* 3p4u_B*
Probab=99.87 E-value=4.7e-23 Score=203.61 Aligned_cols=121 Identities=29% Similarity=0.389 Sum_probs=108.2
Q ss_pred ccccccCccccccCCCCcceEEEEEeCCCCCCC-CCCCCCCChHhHHHHHHHHhhcCCEEEEecCccHHHHHHHhhcCCC
Q psy15857 280 AKSTVEKDADYYRMDHKHRGLALIFNHEHFDSP-HLKSRAGTGADFENLYTTLVNLGFVVKPYHDPEFKVIQNAIDEGPV 358 (455)
Q Consensus 280 a~~~~~~~~~~Y~m~~~~rG~~lI~n~~~F~~~-~l~~R~Gt~~D~~~l~~~~~~Lgf~V~~~~d~~~~~i~~~l~k~~~ 358 (455)
++||++++++.|+|+++|||+||||||++|... .|++|.||++|+++|+++|++|||+|++++|||++||.+.|+
T Consensus 3 ~~~~~~~~~~~Y~m~~~~rg~aLIInn~~F~~~~~l~~R~Gt~~D~~~L~~~f~~LGF~V~~~~dlt~~em~~~l~---- 78 (278)
T 3od5_A 3 YKREMFDPAEKYKMDHRRRGIALIFNHERFFWHLTLPERRGTCADRDNLTRRFSDLGFEVKCFNDLKAEELLLKIH---- 78 (278)
T ss_dssp -----CCTTCBCCCCSSBCCEEEEEECCCCCGGGCCCCCTTHHHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHH----
T ss_pred CccCCCCcccccCCCCCCcCEEEEEeccccCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHH----
Confidence 578999999999999999999999999999853 799999999999999999999999999999999999999998
Q ss_pred cccccccccccccCCCCcccEEEEEEeccCCCCCCCCCCCcHHhHHHHHHHHHhcC
Q psy15857 359 AKSTVEKDADYYRMDHKHRGLALIFNHEHFDSPHLKSRAGTGADFENLYTTLVNLG 414 (455)
Q Consensus 359 ~~s~~~~~~~~Y~m~~~~~g~~lIin~~~F~~~~l~~R~Gs~~D~e~L~~~F~~Lg 414 (455)
+..+.+|...+|++++.++|+..+.+++.+|. ++++.|...|+.-.
T Consensus 79 ---------~~~~~~h~~~d~~vv~ilSHG~~g~i~g~D~~-v~l~~I~~~f~~~~ 124 (278)
T 3od5_A 79 ---------EVSTVSHADADCFVCVFLSHGEGNHIYAYDAK-IEIQTLTGLFKGDK 124 (278)
T ss_dssp ---------HHHHSCCTTBSCEEEEEESCEETTEEECSSSE-EEHHHHHHTTSTTT
T ss_pred ---------HHHhhcccCCCEEEEEEECCCCCCEEEEeCCe-EEHHHHHHHhcccc
Confidence 45567899999999999999998889999998 99999999997643
No 27
>3sir_A Caspase; hydrolase; 2.68A {Drosophila melanogaster} PDB: 3sip_A
Probab=99.87 E-value=7.9e-23 Score=200.09 Aligned_cols=119 Identities=35% Similarity=0.522 Sum_probs=99.5
Q ss_pred ccccCccccccCCCCcceEEEEEeCCCCCCCCCCCCCCChHhHHHHHHHHhhcCCEEEEecCccHHHHHHHhhcCCCccc
Q psy15857 282 STVEKDADYYRMDHKHRGLALIFNHEHFDSPHLKSRAGTGADFENLYTTLVNLGFVVKPYHDPEFKVIQNAIDEGPVAKS 361 (455)
Q Consensus 282 ~~~~~~~~~Y~m~~~~rG~~lI~n~~~F~~~~l~~R~Gt~~D~~~l~~~~~~Lgf~V~~~~d~~~~~i~~~l~k~~~~~s 361 (455)
+|++++++.|+|+|+|||+||||||++|....|++|.||++|+++|+++|++|||+|++++|||++||.+.|+
T Consensus 4 ~~~~~~~~~Y~m~~~~rg~aLIInn~~f~~~~l~~R~G~~~D~~~L~~~f~~LGF~V~~~~dlt~~em~~~l~------- 76 (259)
T 3sir_A 4 SVTDRHAAEYNMRHKNRGMALIFNHEHFEVPTLKSRAGTNVDCENLTRVLKQLDFEVTVYKDCRYKDILRTIE------- 76 (259)
T ss_dssp SCCCSSCSBCCCCSSEEEEEEEEEECCC-----------CCHHHHHHHHHHHTTCEEEEEEECSHHHHHHHHH-------
T ss_pred CCCCCccCcCCCCCCCccEEEEEeccccCCCCCCCCCCcHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHH-------
Confidence 5788999999999999999999999999866799999999999999999999999999999999999999998
Q ss_pred ccccccccccCCCCcccEEEEEEeccCCCCCCCCCCCcHHhHHHHHHHHHhcC
Q psy15857 362 TVEKDADYYRMDHKHRGLALIFNHEHFDSPHLKSRAGTGADFENLYTTLVNLG 414 (455)
Q Consensus 362 ~~~~~~~~Y~m~~~~~g~~lIin~~~F~~~~l~~R~Gs~~D~e~L~~~F~~Lg 414 (455)
+..+++|...+|++++.++|+..+.+++.+|. ++++.|...|+.-.
T Consensus 77 ------~~~~~~h~~~d~~v~~~lsHG~~g~i~~~D~~-v~l~~i~~~f~~~~ 122 (259)
T 3sir_A 77 ------YSASQNHSDSDCILVAILSHGEMGYIYAKDTQ-YKLDNIWSFFTANH 122 (259)
T ss_dssp ------HHHTSCCTTEEEEEEEEEECTTCCCCCCTTHH-HHHHHTTGGGSTTT
T ss_pred ------HHHHhhccCCCEEEEEEecCCCCCeEEeCCCc-EEHHHHHHHhhhcc
Confidence 45567899999999999999999889999885 88888888887543
No 28
>1m72_A Caspase-1; caspase, cysteine protease, hydrolase-hydrolase inhibitor CO; 2.30A {Spodoptera frugiperda} SCOP: c.17.1.1 PDB: 3sip_B
Probab=99.86 E-value=2e-22 Score=198.59 Aligned_cols=124 Identities=36% Similarity=0.524 Sum_probs=112.8
Q ss_pred CCcccccccCccccccCCCCcceEEEEEeCCCCCCCCCCCCCCChHhHHHHHHHHhhcCCEEEEecCccHHHHHHHhhcC
Q psy15857 277 GPVAKSTVEKDADYYRMDHKHRGLALIFNHEHFDSPHLKSRAGTGADFENLYTTLVNLGFVVKPYHDPEFKVIQNAIDEG 356 (455)
Q Consensus 277 ~~~a~~~~~~~~~~Y~m~~~~rG~~lI~n~~~F~~~~l~~R~Gt~~D~~~l~~~~~~Lgf~V~~~~d~~~~~i~~~l~k~ 356 (455)
...|+||+++.++.|+|++++||+||||||++|....|+.|.||++|+++|.++|++|||+|++++|+|++||.+.|+
T Consensus 11 ~~~~~~~~~~~~~~Y~m~~~~rg~aLIInn~~f~~~~l~~R~g~~~Da~~L~~~f~~LGF~V~~~~dlt~~em~~~l~-- 88 (272)
T 1m72_A 11 NRVARMPVDRNAPYYNMNHKHRGMAIIFNHEHFDIHSLKSRTGTNVDSDNLSKVLKTLGFKVTVFPNLKSEEINKFIQ-- 88 (272)
T ss_dssp -CEEECCSCTTCSBCCCCSSEEEEEEEEECCCCSSTTCCCCTTHHHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHH--
T ss_pred cceeeccCCcccccccCCCCCCCEEEEEechhcCCCCcccCCCCHHHHHHHHHHHHHCCCEEEEecCcCHHHHHHHHH--
Confidence 346999999999999999999999999999999865799999999999999999999999999999999999999998
Q ss_pred CCcccccccccccccCCCCcccEEEEEEeccCCCCCCCCCCCcHHhHHHHHHHHHhcC
Q psy15857 357 PVAKSTVEKDADYYRMDHKHRGLALIFNHEHFDSPHLKSRAGTGADFENLYTTLVNLG 414 (455)
Q Consensus 357 ~~~~s~~~~~~~~Y~m~~~~~g~~lIin~~~F~~~~l~~R~Gs~~D~e~L~~~F~~Lg 414 (455)
+..+.+|...+|++++..+|+..+.+++.+|. ++++.|...|+.-.
T Consensus 89 -----------~~~~~dh~~~d~~v~~~lsHG~~~~i~~~D~~-v~l~~i~~~f~~~~ 134 (272)
T 1m72_A 89 -----------QTAEMDHSDADCLLVAVLTHGELGMLYAKDTH-YKPDNLWYYFTADK 134 (272)
T ss_dssp -----------HHHTSCCTTEEEEEEEEESCEETTEEECSSSE-ECTTHHHHTTSTTT
T ss_pred -----------HHHHhhcCCCCEEEEEEcCCCCCCEEEecCCc-EEHHHHHHHhcccc
Confidence 45567889999999999999988888899984 88999999997543
No 29
>3h11_B Caspase-8; cell death, apoptosis, caspase, alternative splicing, HOST- virus interaction, polymorphism, cytoplasm, disease mutation; 1.90A {Homo sapiens} SCOP: c.17.1.1 PDB: 2k7z_A 1i4e_B 2fun_B 2c2z_B*
Probab=99.85 E-value=4.5e-22 Score=195.93 Aligned_cols=114 Identities=28% Similarity=0.371 Sum_probs=104.5
Q ss_pred cccccCCCCcceEEEEEeCCCCCC--------CCCCCCCCChHhHHHHHHHHhhcCCEEEEecCccHHHHHHHhhcCCCc
Q psy15857 288 ADYYRMDHKHRGLALIFNHEHFDS--------PHLKSRAGTGADFENLYTTLVNLGFVVKPYHDPEFKVIQNAIDEGPVA 359 (455)
Q Consensus 288 ~~~Y~m~~~~rG~~lI~n~~~F~~--------~~l~~R~Gt~~D~~~l~~~~~~Lgf~V~~~~d~~~~~i~~~l~k~~~~ 359 (455)
.+.|+|+++|||+||||||++|.. .+|++|.||++|+++|+++|++|||+|++++|||++||.+.|+
T Consensus 7 ~~~Y~m~~~~rG~aLIInn~~F~~~~~~~~~~~~l~~R~Gt~~D~~~L~~~f~~LGF~V~~~~dlt~~em~~~l~----- 81 (271)
T 3h11_B 7 DKVYQMKSKPRGYCLIINNHNFAKAREKVPKLHSIRDRNGTHLDAGALTTTFEELHFEIKPHDDCTVEQIYEILK----- 81 (271)
T ss_dssp CCBCCCCSSSCCEEEEEECCCCSHHHHTCGGGTTCCCCTTHHHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHH-----
T ss_pred cccCCCCCCCCCEEEEEEchhcCcccccccccccCCCCCCcHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHH-----
Confidence 366999999999999999999985 2599999999999999999999999999999999999999998
Q ss_pred ccccccccccccCCCCcccEEEEEEeccCCCCCCCCCCCcHHhHHHHHHHHHhcC
Q psy15857 360 KSTVEKDADYYRMDHKHRGLALIFNHEHFDSPHLKSRAGTGADFENLYTTLVNLG 414 (455)
Q Consensus 360 ~s~~~~~~~~Y~m~~~~~g~~lIin~~~F~~~~l~~R~Gs~~D~e~L~~~F~~Lg 414 (455)
+..+++|...+|++++.++|+..+.+++.+|..++++.|...|+.-.
T Consensus 82 --------~~~~~~h~~~d~~v~~ilSHG~~g~i~g~D~~~v~l~~I~~~f~~~~ 128 (271)
T 3h11_B 82 --------IYQLMDHSNMDCFICCILSHGDKGIIYGTDGQEAPIYELTSQFTGLK 128 (271)
T ss_dssp --------HHHHSCCTTCSCEEEEEESCEETTEEECTTSCEEEHHHHHGGGSTTT
T ss_pred --------HHHHhcCCCCCEEEEEEEcCCcCCEEEecCCCeecHHHHHHHhhhcc
Confidence 45567899999999999999998889999999899999999997543
No 30
>1nw9_B Caspase 9, apoptosis-related cysteine protease; XIAP, caspase inhibition, caspase activation, dimerization; 2.40A {Homo sapiens} SCOP: c.17.1.1 PDB: 1jxq_A* 2ar9_A
Probab=99.82 E-value=3.6e-21 Score=190.01 Aligned_cols=113 Identities=21% Similarity=0.236 Sum_probs=102.8
Q ss_pred ccccCCCCcceEEEEEeCCCCCCC-CCCCCCCChHhHHHHHHHHhhcCCEEEEecCccHHHHHHHhhcCCCccccccccc
Q psy15857 289 DYYRMDHKHRGLALIFNHEHFDSP-HLKSRAGTGADFENLYTTLVNLGFVVKPYHDPEFKVIQNAIDEGPVAKSTVEKDA 367 (455)
Q Consensus 289 ~~Y~m~~~~rG~~lI~n~~~F~~~-~l~~R~Gt~~D~~~l~~~~~~Lgf~V~~~~d~~~~~i~~~l~k~~~~~s~~~~~~ 367 (455)
..|+|+|+|||+||||||++|... +|+.|.||++|+++|+++|++|||+|++++|+|++||.+.|+
T Consensus 12 ~~Y~m~~~~rg~aLIInn~~f~~~~~l~~R~Gt~~D~~~L~~~f~~LgF~V~~~~dlt~~em~~~l~------------- 78 (277)
T 1nw9_B 12 LAYILSMEPCGHCLIINNVNFCRESGLRTRTGSNIDCEKLRRRFSSLHFMVEVKGDLTAKKMVLALL------------- 78 (277)
T ss_dssp TBCCCCCSSCEEEEEEECCCCCGGGTCCCCTTHHHHHHHHHHHHHHTTEEEEEEESCCHHHHHHHHH-------------
T ss_pred ceeeCCCCcccEEEEEeCcccCCCCCCCCCCCcHHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHH-------------
Confidence 579999999999999999999853 799999999999999999999999999999999999999998
Q ss_pred ccccCCCCcccEEEEEEeccCCC-------CCCCCCCCcHHhHHHHHHHHHhcC
Q psy15857 368 DYYRMDHKHRGLALIFNHEHFDS-------PHLKSRAGTGADFENLYTTLVNLG 414 (455)
Q Consensus 368 ~~Y~m~~~~~g~~lIin~~~F~~-------~~l~~R~Gs~~D~e~L~~~F~~Lg 414 (455)
+..+.+|...+|++++.++|+.. +.++..+|..++++.|...|+.-.
T Consensus 79 ~~~~~~h~~~D~~vv~ilSHG~~~~~~~~~g~iy~~D~~~v~l~~i~~~f~~~~ 132 (277)
T 1nw9_B 79 ELARQDHGALDCCVVVILSHGCQASHLQFPGAVYGTDGCPVSVEKIVNIFNGTS 132 (277)
T ss_dssp HHHHSCCTTCSEEEEEEEEEEECCCCSSSCCEEECTTSCEEEHHHHHHTTCTTT
T ss_pred HHHHhhcccCCeEEEEEeCCCCccccccCCCcEEecCCceeeHHHHHHHhcccC
Confidence 45567888899999999999987 677888988899999999997543
No 31
>4ehd_A Caspase-3; caspase, apoptosis, allosteric inhibition; 1.58A {Homo sapiens} PDB: 4ehk_A 4ehf_A 4ehn_A 1cp3_A 4ehh_A 4eha_A 4ehl_A 1i3o_A
Probab=99.82 E-value=3.8e-21 Score=189.75 Aligned_cols=113 Identities=25% Similarity=0.338 Sum_probs=103.3
Q ss_pred cccccCCCCcceEEEEEeCCCCCC-CCCCCCCCChHhHHHHHHHHhhcCCEEEEecCccHHHHHHHhhcCCCcccccccc
Q psy15857 288 ADYYRMDHKHRGLALIFNHEHFDS-PHLKSRAGTGADFENLYTTLVNLGFVVKPYHDPEFKVIQNAIDEGPVAKSTVEKD 366 (455)
Q Consensus 288 ~~~Y~m~~~~rG~~lI~n~~~F~~-~~l~~R~Gt~~D~~~l~~~~~~Lgf~V~~~~d~~~~~i~~~l~k~~~~~s~~~~~ 366 (455)
.+.|+|+|+|||+||||||++|.. ..|++|.||++|+++|+++|++|||+|++++|||++||.+.|+
T Consensus 34 ~~~Y~m~~~~rg~aLIInN~~F~~~~~l~~R~Gt~~D~~~L~~~f~~LGF~V~~~~dlt~~em~~~l~------------ 101 (277)
T 4ehd_A 34 DNSYKMDYPEMGLCIIINNKNFHKSTGMTSRSGTDVDAANLRETFRNLKYEVRNKNDLTREEIVELMR------------ 101 (277)
T ss_dssp CCBCCCCSSEEEEEEEEECCCCCGGGTCCCCTTHHHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHH------------
T ss_pred cccccCCCCCCCEEEEEEchhcCCcCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHH------------
Confidence 467999999999999999999985 3799999999999999999999999999999999999999998
Q ss_pred cccccCCCCcccEEEEEEeccCCCCCCCCCCCcHHhHHHHHHHHHhcC
Q psy15857 367 ADYYRMDHKHRGLALIFNHEHFDSPHLKSRAGTGADFENLYTTLVNLG 414 (455)
Q Consensus 367 ~~~Y~m~~~~~g~~lIin~~~F~~~~l~~R~Gs~~D~e~L~~~F~~Lg 414 (455)
+..+++|...+|++++.++|+..+.+++.+| .++++.|...|+.-.
T Consensus 102 -~f~~~dh~~~d~~vv~ilSHG~~g~i~g~D~-~v~l~~I~~~f~~~~ 147 (277)
T 4ehd_A 102 -DVSKEDHSKRSSFVCVLLSHGEEGIIFGTNG-PVDLKKITNFFRGDR 147 (277)
T ss_dssp -HHHTSCCTTEEEEEEEEESCEETTEEEETTE-EEEHHHHHHTTSTTT
T ss_pred -HHHhhcccCCCEEEEEEEcCCCCCEEEEeCC-cEeHHHHHHHhhhcc
Confidence 4556789999999999999999888888998 499999999997544
No 32
>2h54_A Caspase-1; allosteric site, dimer interface, hydrolase; HET: PHQ; 1.80A {Homo sapiens} PDB: 1rwm_A* 1rwk_A* 1rwo_A* 1rwp_A* 1rwv_A* 1rww_A* 1rwn_A* 2h48_A* 2h4w_A* 1rwx_A* 2hbq_A* 2hby_A* 1ibc_A 3d6m_A* 2h4y_A* 2h51_A* 3d6f_A* 3d6h_A* 2hbz_A* 2hbr_A* ...
Probab=99.82 E-value=1.2e-20 Score=174.73 Aligned_cols=131 Identities=19% Similarity=0.255 Sum_probs=108.9
Q ss_pred cccccccCccccccCCCCc--ceEEEEEeCCCCCCCCCCCCCCChHhHHHHHHHHhhcCCEEEEecCccHHHHHHHhhcC
Q psy15857 279 VAKSTVEKDADYYRMDHKH--RGLALIFNHEHFDSPHLKSRAGTGADFENLYTTLVNLGFVVKPYHDPEFKVIQNAIDEG 356 (455)
Q Consensus 279 ~a~~~~~~~~~~Y~m~~~~--rG~~lI~n~~~F~~~~l~~R~Gt~~D~~~l~~~~~~Lgf~V~~~~d~~~~~i~~~l~k~ 356 (455)
.++|+.++.++.|+|++++ ||+||||||++|. .++.|.||++|+++|.++|++|||+|+++.|+|++||.+.|++
T Consensus 22 ~~~~~~~~~~~~Y~m~~~~~~~g~ALIInn~~f~--~~~~R~G~~~Da~~L~~~f~~LgF~V~~~~dlt~~em~~~l~~- 98 (178)
T 2h54_A 22 AQRIWKQKSAEIYPIMDKSSRTRLALIICNEEFD--SIPRRTGAEVDITGMTMLLQNLGYSVDVKKNLTASDMTTELEA- 98 (178)
T ss_dssp HHHHC---CCSBCCCCCTTTCCCEEEEEECCCCS--SSCCCTTHHHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHH-
T ss_pred hhhccccCcccccCCCCCCCcCCEEEEEehhhcC--CCccCCCCHHHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHH-
Confidence 4677888888999999987 9999999999997 6999999999999999999999999999999999999999983
Q ss_pred CCcccccccccccccCCCCcccEEEEEEeccCCCCCCCCCCCc-----HHhHHHHHHHHHhcCCeEEEecCCC
Q psy15857 357 PVAKSTVEKDADYYRMDHKHRGLALIFNHEHFDSPHLKSRAGT-----GADFENLYTTLVNLGFVVKPYHDPE 424 (455)
Q Consensus 357 ~~~~s~~~~~~~~Y~m~~~~~g~~lIin~~~F~~~~l~~R~Gs-----~~D~e~L~~~F~~LgF~V~~~~dlt 424 (455)
..-+.+|...++++++-.+|+..+.+++.+|. .++++.|...|+.-+ |+.+.++|+
T Consensus 99 -----------f~~~~d~~~~d~~v~~~lsHG~~g~i~g~D~~~~~~~~v~l~~I~~~f~~~~-CpsL~gKPK 159 (178)
T 2h54_A 99 -----------FAHRPEHKTSDSTFLVFMSHGIREGICGKKHSEQVPDILQLNAIFNMLNTKN-CPSLKDKPK 159 (178)
T ss_dssp -----------HHTCGGGGGCSCEEEEEESCBCSSCEECTTCCSSSCCEECHHHHHHHHSTTT-CGGGTTSCE
T ss_pred -----------HHhhhhcCCCCEEEEEEecCCCCCeEEeecCCcccCcEEEHHHHHHHHhhcC-ChhhcCCce
Confidence 12345788889999999999998778888884 678899999998765 344444443
No 33
>2j32_A Caspase-3; Pro-caspase3, thiol protease, hydrolase, hydrolase-hydrolase inhibitor complex; 1.30A {Homo sapiens} PDB: 2j30_A 3h0e_A* 2j33_A 3pd1_A 2j31_A 3pcx_A 1nms_A* 1nmq_A* 3deh_A* 3dei_A* 3dej_A* 3dek_A* 3pd0_A 3itn_A 1qx3_A
Probab=99.79 E-value=3.4e-20 Score=180.53 Aligned_cols=110 Identities=25% Similarity=0.364 Sum_probs=102.0
Q ss_pred ccccCCCCcceEEEEEeCCCCCCC-CCCCCCCChHhHHHHHHHHhhcCCEEEEecCccHHHHHHHhhcCCCccccccccc
Q psy15857 289 DYYRMDHKHRGLALIFNHEHFDSP-HLKSRAGTGADFENLYTTLVNLGFVVKPYHDPEFKVIQNAIDEGPVAKSTVEKDA 367 (455)
Q Consensus 289 ~~Y~m~~~~rG~~lI~n~~~F~~~-~l~~R~Gt~~D~~~l~~~~~~Lgf~V~~~~d~~~~~i~~~l~k~~~~~s~~~~~~ 367 (455)
+.|+|+|++||+||||||++|... +|+.|.||++|+++|.++|++|||+|+++.|+|++||.+.|+
T Consensus 7 ~~Y~m~~~~rg~aLIInn~~f~~~~~l~~r~g~~~D~~~l~~~f~~LgF~V~~~~dlt~~em~~~l~------------- 73 (250)
T 2j32_A 7 NSYKMDYPEMGLCIIINNKNFHKSTGMTSRSGTDVDAANLRETFRNLKYEVRNKNDLTREEIVELMR------------- 73 (250)
T ss_dssp CBCCCCSSEEEEEEEEECCCCCGGGTCCCCTTHHHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHH-------------
T ss_pred ccccCCCCCccEEEEEechhcCCCCCCcCCCCCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHH-------------
Confidence 569999999999999999999863 699999999999999999999999999999999999999998
Q ss_pred ccccCCCCcccEEEEEEeccCCCCCCCCCCCcHHhHHHHHHHHHh
Q psy15857 368 DYYRMDHKHRGLALIFNHEHFDSPHLKSRAGTGADFENLYTTLVN 412 (455)
Q Consensus 368 ~~Y~m~~~~~g~~lIin~~~F~~~~l~~R~Gs~~D~e~L~~~F~~ 412 (455)
+...++|...+|++++-.+|+..+.+++.+| .++++.|.+.|+.
T Consensus 74 ~~~~~~~~~~d~~v~~~lsHG~~g~i~~~D~-~v~l~~i~~~f~~ 117 (250)
T 2j32_A 74 DVSKEDHSKRSSFVCVLLSHGEEGIIFGTNG-PVDLKKITNFFRG 117 (250)
T ss_dssp HHHTSCCTTEEEEEEEEESCEETTEEEETTE-EEEHHHHHHTTST
T ss_pred HHHHhhccCCCEEEEEECCCCCCCeEEecCC-cEEHHHHHHHhcc
Confidence 5566788999999999999999888888888 7999999999976
No 34
>1f1j_A Caspase-7 protease; caspase-7, cysteine protease, hydrolase, apoptosis, hydrolas hydrolase inhibitor complex; 2.35A {Homo sapiens} SCOP: c.17.1.1 PDB: 1kmc_A 3r5k_A 1i4o_A 1gqf_A 3h1p_A 1shj_A* 1k86_A 1k88_A 1shl_A*
Probab=99.79 E-value=4e-20 Score=184.76 Aligned_cols=113 Identities=22% Similarity=0.315 Sum_probs=102.1
Q ss_pred cccccCCCCcceEEEEEeCCCCCCC-CCCCCCCChHhHHHHHHHHhhcCCEEEEecCccHHHHHHHhhcCCCcccccccc
Q psy15857 288 ADYYRMDHKHRGLALIFNHEHFDSP-HLKSRAGTGADFENLYTTLVNLGFVVKPYHDPEFKVIQNAIDEGPVAKSTVEKD 366 (455)
Q Consensus 288 ~~~Y~m~~~~rG~~lI~n~~~F~~~-~l~~R~Gt~~D~~~l~~~~~~Lgf~V~~~~d~~~~~i~~~l~k~~~~~s~~~~~ 366 (455)
...|+|+|++||+||||||++|... .|+.|.||++|+++|.++|++|||+|+++.|+|+++|.+.|+
T Consensus 59 ~~~Y~m~~~~rg~aLIInN~~f~~~~~L~~R~G~~~Da~~L~~~f~~LGF~V~~~~dlt~~em~~~l~------------ 126 (305)
T 1f1j_A 59 TYQYNMNFEKLGKCIIINNKNFDKVTGMGVRNGTDKDAEALFKCFRSLGFDVIVYNDCSCAKMQDLLK------------ 126 (305)
T ss_dssp -CBCCCCSSEEEEEEEEECCCCCTTTTCCCCTTHHHHHHHHHHHHHHHTEEEEEEESCCHHHHHHHHH------------
T ss_pred ccccccCCCCCCEEEEEechhcCCCccCccCCCcHHHHHHHHHHHHHCCCEEEEecCcCHHHHHHHHH------------
Confidence 5779999999999999999999864 799999999999999999999999999999999999999998
Q ss_pred cccccCCCCcccEEEEEEeccCCCCCCCCCCCcHHhHHHHHHHHHhcC
Q psy15857 367 ADYYRMDHKHRGLALIFNHEHFDSPHLKSRAGTGADFENLYTTLVNLG 414 (455)
Q Consensus 367 ~~~Y~m~~~~~g~~lIin~~~F~~~~l~~R~Gs~~D~e~L~~~F~~Lg 414 (455)
...+.+|...+|++++-.+|+..+.+++.+| .++++.|...|+...
T Consensus 127 -~~~~~~h~~~d~~vv~ilsHG~~~~i~g~D~-~v~l~~I~~~f~~~~ 172 (305)
T 1f1j_A 127 -KASEEDHTNAACFACILLSHGEENVIYGKDG-VTPIKDLTAHFRGDR 172 (305)
T ss_dssp -HHHHSCGGGEEEEEEEEESCEETTEEECSSS-EEEHHHHHHTTSTTT
T ss_pred -HHHHhhcCCCCEEEEEEecCCCCCeEEecCC-eEEHHHHHHHhhhcc
Confidence 4566788889999999999998878888887 588999999987544
No 35
>2fp3_A Caspase NC; apoptosis, initiator caspase activation, dimerization, active site conformation, hydrolysis/apoptosis complex; 2.50A {Drosophila melanogaster}
Probab=99.79 E-value=4.1e-20 Score=185.61 Aligned_cols=115 Identities=17% Similarity=0.260 Sum_probs=104.1
Q ss_pred cCccccccCCCC-cceEEEEEeCCCCCCCCCCCCCCChHhHHHHHHHHhhcCCEEEEecCccHHHHHHHhhcCCCccccc
Q psy15857 285 EKDADYYRMDHK-HRGLALIFNHEHFDSPHLKSRAGTGADFENLYTTLVNLGFVVKPYHDPEFKVIQNAIDEGPVAKSTV 363 (455)
Q Consensus 285 ~~~~~~Y~m~~~-~rG~~lI~n~~~F~~~~l~~R~Gt~~D~~~l~~~~~~Lgf~V~~~~d~~~~~i~~~l~k~~~~~s~~ 363 (455)
++..+.|+|+++ +||+||||||++|...+ +.|.||++|+++|+++|++|||+|++++|+|++||.+.|+
T Consensus 47 ~~~~~~Y~m~~~~~rg~aLIInN~~F~~~~-~~R~Gt~~D~~~L~~~f~~LGF~V~~~~dlt~~em~~~l~--------- 116 (316)
T 2fp3_A 47 SAILGTYKMQSRFNRGVLLMVNIMDYPDQN-RRRIGAEKDSKSLIHLFQELNFTIFPYGNVNQDQFFKLLT--------- 116 (316)
T ss_dssp CCSSCBCCCCCSSCSEEEEEEECCCCSSTT-SCCTTHHHHHHHHHHHHHHTTEEEEEECSCCHHHHHHHHH---------
T ss_pred CCccccccCCCCCCCcEEEEEeCcccCCCC-CCCCCcHHHHHHHHHHHHHCCCEEEEccCCCHHHHHHHHH---------
Confidence 344577999999 99999999999998645 9999999999999999999999999999999999999998
Q ss_pred ccccccccCCCC-cccEEEEEEeccCCC----CCCCCCCCcHHhHHHHHHHHHhc
Q psy15857 364 EKDADYYRMDHK-HRGLALIFNHEHFDS----PHLKSRAGTGADFENLYTTLVNL 413 (455)
Q Consensus 364 ~~~~~~Y~m~~~-~~g~~lIin~~~F~~----~~l~~R~Gs~~D~e~L~~~F~~L 413 (455)
+..+.+|. ..+|++++.++|+.. +.+++.+|..++++.|...|+.-
T Consensus 117 ----~f~~~~h~~~~D~~vv~ilSHG~~~~g~g~i~g~D~~~v~l~~I~~~f~~~ 167 (316)
T 2fp3_A 117 ----MVTSSSYVQNTECFVMVLMTHGNSVEGKEKVEFRDGSVVDMQKIKDHFQTA 167 (316)
T ss_dssp ----HHHTSHHHHTCSCEEEEEESCEECCTTCCEEECTTSCEEEHHHHHHTTSTT
T ss_pred ----HHHHHhhcCCCCEEEEEEccCCCccCCCCEEEeecCcEEeHHHHHHHhccc
Confidence 45567887 889999999999987 78899999989999999999764
No 36
>3e4c_A Caspase-1; zymogen, inflammasome, ICE, IL-1B, innate immunity, apoptosis, hydrolase, protease protease; 2.05A {Homo sapiens}
Probab=99.72 E-value=2.3e-18 Score=171.84 Aligned_cols=115 Identities=21% Similarity=0.288 Sum_probs=101.5
Q ss_pred ccCccccccCCCCc--ceEEEEEeCCCCCCCCCCCCCCChHhHHHHHHHHhhcCCEEEEecCccHHHHHHHhhcCCCccc
Q psy15857 284 VEKDADYYRMDHKH--RGLALIFNHEHFDSPHLKSRAGTGADFENLYTTLVNLGFVVKPYHDPEFKVIQNAIDEGPVAKS 361 (455)
Q Consensus 284 ~~~~~~~Y~m~~~~--rG~~lI~n~~~F~~~~l~~R~Gt~~D~~~l~~~~~~Lgf~V~~~~d~~~~~i~~~l~k~~~~~s 361 (455)
.++.++.|+|.+++ +|+||||||++|. .|+.|.||++|+++|.++|++|||+|++++|||++||.+.|++
T Consensus 44 ~~~~~e~Y~m~~~~~~~r~aLII~N~~f~--~l~~R~G~~~Da~~L~~~f~~LGF~V~~~~dlt~~em~~~l~~------ 115 (302)
T 3e4c_A 44 KQKSAEIYPIMDKSSRTRLALIICNEEFD--SIPRRTGAEVDITGMTMLLQNLGYSVDVKKNLTASDMTTELEA------ 115 (302)
T ss_dssp HHHGGGBCCCCCTTTCCCEEEEEECCSCS--SSCCCTTHHHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHH------
T ss_pred HhccccccccCCCCCCccEEEEEECcCCC--CCCCCCCcHHHHHHHHHHHHHCCCEEEEeeCCCHHHHHHHHHH------
Confidence 34667889999997 7999999999997 6999999999999999999999999999999999999999983
Q ss_pred ccccccccccCCCCcccEEEEEEeccCCCCCCCCCCC-----cHHhHHHHHHHHHh
Q psy15857 362 TVEKDADYYRMDHKHRGLALIFNHEHFDSPHLKSRAG-----TGADFENLYTTLVN 412 (455)
Q Consensus 362 ~~~~~~~~Y~m~~~~~g~~lIin~~~F~~~~l~~R~G-----s~~D~e~L~~~F~~ 412 (455)
...+.+|...++++++..+|+..+.+++.++ ..++++.|...|+.
T Consensus 116 ------f~~~~dh~~~d~~vv~~lsHG~~~~i~g~D~~~~~~~~v~l~~I~~~F~~ 165 (302)
T 3e4c_A 116 ------FAHRPEHKTSDSTFLVFMSHGIREGICGKKHSEQVPDILQLNAIFNMLNT 165 (302)
T ss_dssp ------HHTCGGGGGCSCEEEEEEEEEETTEEECTTCCSSSCCEECHHHHHHHTST
T ss_pred ------HHhhhccCCCCEEEEEEeccCcCCeEEeecccccCCcEEEHHHHHHHHhh
Confidence 2234588888999999999998877788876 56899999999976
No 37
>3h11_A CAsp8 and FADD-like apoptosis regulator; cell death, apoptosis, caspase, alternative splicing, HOST- virus interaction, polymorphism, cytoplasm, disease mutation; 1.90A {Homo sapiens} PDB: 3h13_A
Probab=99.70 E-value=3.3e-18 Score=168.33 Aligned_cols=109 Identities=17% Similarity=0.200 Sum_probs=94.2
Q ss_pred ccccccCccccccCCCCcceEEEEEeCCCCCCCCCCCCCCChHhHHHHHHHHhhcCCEEEEecCccHHHHHHHhhcCCCc
Q psy15857 280 AKSTVEKDADYYRMDHKHRGLALIFNHEHFDSPHLKSRAGTGADFENLYTTLVNLGFVVKPYHDPEFKVIQNAIDEGPVA 359 (455)
Q Consensus 280 a~~~~~~~~~~Y~m~~~~rG~~lI~n~~~F~~~~l~~R~Gt~~D~~~l~~~~~~Lgf~V~~~~d~~~~~i~~~l~k~~~~ 359 (455)
|-+|.++.++.|+|+|+|||+||||||.. +|+++|+++|++|||+|++|+|||++||.+.|+
T Consensus 25 ~~~~~~~~~~~Y~m~~~~rG~~LIinn~~-------------~D~~~L~~~f~~LgF~V~~~~dlt~~em~~~l~----- 86 (272)
T 3h11_A 25 AFLPQSIPEERYKMKSKPLGICLIIDCIG-------------NETELLRDTFTSLGYEVQKFLHLSMHGISQILG----- 86 (272)
T ss_dssp ----CCSSSCBCCCCCSSSEEEEEEESSC-------------CCCSHHHHHHHHHTEEEEEEESCBHHHHHHHHH-----
T ss_pred CCCCCCCccccCCCCCCcceEEEEECCch-------------HHHHHHHHHHHHCCCEEEEeeCCCHHHHHHHHH-----
Confidence 55667777889999999999999999953 588999999999999999999999999999998
Q ss_pred cccccccccccc-CCCCcccEEEEEEeccCCCCCCCCCCCc--HHhHHHHHHHHHhcC
Q psy15857 360 KSTVEKDADYYR-MDHKHRGLALIFNHEHFDSPHLKSRAGT--GADFENLYTTLVNLG 414 (455)
Q Consensus 360 ~s~~~~~~~~Y~-m~~~~~g~~lIin~~~F~~~~l~~R~Gs--~~D~e~L~~~F~~Lg 414 (455)
+... .+|...+|++++.++|+..+.+++.+|. .++++.|.+.|.+-.
T Consensus 87 --------~~~~~~dh~~~d~~v~~ilSHG~~g~i~g~D~~~~~v~l~~i~~~f~~~~ 136 (272)
T 3h11_A 87 --------QFACMPEHRDYDSFVCVLVSRGGSQSVYGVDQTHSGLPLHHIRRMFMGDS 136 (272)
T ss_dssp --------HHHTCGGGGGCSEEEEEEEEEEETTEECBTSCCSSCEEHHHHHHHHSTTT
T ss_pred --------HHHhccccCCCCEEEEEEEcCCCCCeEEEEcCCcceEeHHHHHHHhcccc
Confidence 4444 4889999999999999998889999998 599999999997643
No 38
>3bij_A Uncharacterized protein GSU0716; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.50A {Geobacter sulfurreducens pca}
Probab=99.43 E-value=4e-13 Score=132.81 Aligned_cols=200 Identities=15% Similarity=0.144 Sum_probs=140.5
Q ss_pred ceeEEEEEeCCCCCC----CCCCCCCChHHhHHHHHHHHHhCCcEEEEec--CCCHHHHHHHHHHHHhhcCCCCceEEEE
Q psy15857 23 HRGLALIFNHEHFDS----PHLKSRAGTGADFENLYTTLVNLGFVVKPYH--DPEFKVIQNAIDEAAEQDYTDADCFVMA 96 (455)
Q Consensus 23 ~~G~aLIInN~~F~~----~~l~~R~Gs~~D~~~L~~~F~~LGF~V~~~~--nlt~~em~~~l~~~s~~d~~~~d~~vvv 96 (455)
++.+||||.|..|.. ....+..|+.+|++.|+++|+++||.|.+.. ++|.+.|...|+.+.+. ....|.++++
T Consensus 2 ~~~~ALlIGi~~Y~~~~Y~~~~~~L~~~~nDa~~~~~~L~~~Gf~v~~l~~~~~t~~~i~~al~~l~~~-~~~~D~~~~y 80 (285)
T 3bij_A 2 PKGIALALGLNAVDPKHYGGWAGKLNACEADAEDMAAIAAERGFAVTTLMTKAATRAKVIDAIGKAAKA-LGKGDIFMLS 80 (285)
T ss_dssp CCEEEEEEECSCCCTTTTTTCCCCCSSHHHHHHHHHHHHHHTTCEEEEEEGGGCCHHHHHHHHHHHHHH-CCTTCEEEEE
T ss_pred CceEEEEEEeCCccccccCCCcccCCCCHHHHHHHHHHHHHcCCceEEecCCccCHHHHHHHHHHHHHh-CCCCCEEEEE
Confidence 578999999998652 2356789999999999999999999987665 47999999999999864 3445999999
Q ss_pred EecCCCC-------------ceeeeeCCccChhhhHHhhccccccccCCCceEEEEecccCCccCCCceeee--------
Q psy15857 97 VLTHGED-------------GILHAKDVPYKPKNLWSKFTADNCLTLAGKPKLFFIQACQGDKLDAGVTIRT-------- 155 (455)
Q Consensus 97 ilSHG~~-------------g~I~g~D~~v~~~~I~~~F~~~~c~~L~gKPKlFfiQACRG~~~d~gv~~~~-------- 155 (455)
|.+||.+ +.++..|+.+.-++|...+. .++ .++.+++|++||+......+.+...
T Consensus 81 fSGHG~~~~~~~g~e~dg~~~~l~p~D~~i~~~~l~~~l~--~l~--~~~~~~vilD~C~SG~~~~~~p~~~~~~~~~~~ 156 (285)
T 3bij_A 81 YSGHGGQVPDTSNDEPDGVDETWCLFDGELIDDELYALLG--KFA--AGVRVLVFSDSCHSGTVVKMAYYNGTTAARSAG 156 (285)
T ss_dssp EESCEEEEECTTSCCTTCEEEEEECSSSEEEHHHHHHHHT--TSC--SSCEEEEEEECCCCCCHHHHHHTTC--------
T ss_pred EcCCcccccCCCCCccCCCcceEEecCCCccHHHHHHHHH--hcc--CCCeEEEEEecCCCCcccccccccccccccccc
Confidence 9999962 36788898877778888885 333 3678899999999643221100000
Q ss_pred ----c--cCCCCC----------------------CCcCCCCCCCEEEEEccCCCCccccCc---hhHHHHHHHHhHhH-
Q psy15857 156 ----Q--VDGHPS----------------------NTYSIPLHADFLMAYSTISDSPMFGQR---FGLKDKCSKVVSKT- 203 (455)
Q Consensus 156 ----~--~d~~~~----------------------~~~~iP~~aD~Li~yST~pG~vS~R~~---~fIq~Lc~~~~~~~- 203 (455)
+ ....+. .....+..+++++.+|+.++.+|+... .|..+|++.+....
T Consensus 157 ~~~g~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~i~lsa~~~~q~A~e~~~~G~FT~aLl~~L~~~~~ 236 (285)
T 3bij_A 157 PDEGEIRYRAMPQSVAMRTYRANREFYDTIQQKTKKVDLADVKASILLISGCQDNQLSQDGAFNGAFTGQLLRVWKNGLY 236 (285)
T ss_dssp -----CEESBCCHHHHHHHHHHTHHHHHHHHHHCCCCCTTTCSSEEEEEESSCTTSCCEECSSSCHHHHHHHHHHGGGTC
T ss_pred ccccccceeecCchhhhhhhhcchhHHHHHhhhcccccccCCCCCEEEEEeCCCCccccccccCCHHHHHHHHHHhhCCC
Confidence 0 000000 000123457899999999999998754 58999998776542
Q ss_pred ---HHHhhhcccCCCCccccccccccccCCC
Q psy15857 204 ---YQVMSSNVDTSNGECQTDGHESHTNGSA 231 (455)
Q Consensus 204 ---~~~m~~~~~~~~~e~~~~~~~~~~~~s~ 231 (455)
+..|.++++.. +...|.||..+++
T Consensus 237 ~~s~~~l~~~v~~~----~~~~Q~P~~~~~g 263 (285)
T 3bij_A 237 KGSYRSFHKAIVRR----MPPDQTPNFFTAG 263 (285)
T ss_dssp CSCHHHHHHHHHHH----SCTTCCCEEEEEE
T ss_pred CcCHHHHHHHHHHh----cCCCCCcceeCCC
Confidence 44455555532 2366788876653
No 39
>1sc3_B Interleukin-1 beta convertase; malonate-bound caspase-1, hydrolase; 1.80A {Homo sapiens} SCOP: c.17.1.1 PDB: 1ice_B 1bmq_B* 1rwm_B* 1rwk_B* 1rwo_B* 1rwp_B* 1rwv_B* 1rww_B* 1rwn_B* 1sc1_B 1rwx_B 1sc4_B 2h4y_B* 2hbq_B* 2hbr_B* 3ns7_B* 3d6f_B* 3d6h_B* 3d6m_B* 2h4w_B* ...
Probab=99.14 E-value=2.3e-11 Score=99.81 Aligned_cols=51 Identities=12% Similarity=0.070 Sum_probs=40.4
Q ss_pred cCCCCCCCEEEEEccCCCCccccCc----hhHHHHHHHHhHhH----HHHhhhcccCCC
Q psy15857 165 YSIPLHADFLMAYSTISDSPMFGQR----FGLKDKCSKVVSKT----YQVMSSNVDTSN 215 (455)
Q Consensus 165 ~~iP~~aD~Li~yST~pG~vS~R~~----~fIq~Lc~~~~~~~----~~~m~~~~~~~~ 215 (455)
.++|.+||||++|||+|||+||||+ ||||+||+.|.+.. ..-|..+|...+
T Consensus 3 ~~ip~~aDfL~~yST~pG~~S~R~~~~GSwfIq~Lc~~l~~~~~~~dl~~il~~V~~~v 61 (88)
T 1sc3_B 3 KKAHIEKDFIAFCSSTPDNVSWRHPTMGSVFIGRLIEHMQEYACSCDVEEIFRKVRFSF 61 (88)
T ss_dssp CCCCSSCSEEEEESSCTTBCCCEETTTEEHHHHHHHHHHHHHTTTSCHHHHHHHHHHHT
T ss_pred cccCCCCCEEEEEeCCCCCEeeEcCCCCCHHHHHHHHHHHHhCCcCcHHHHHHHHHHHH
Confidence 5799999999999999999999977 89999999887643 233444554443
No 40
>1pyo_B Caspase-2; apoptosis, caspase, alpha-beta, thiol protease, hydrolase-HY inhibitor complex; 1.65A {Homo sapiens} SCOP: c.17.1.1 PDB: 2p2c_B 3r5j_B 3r6g_B 3r7b_B 3r7n_B 3r7s_B 3r6l_B
Probab=99.03 E-value=5.7e-11 Score=100.62 Aligned_cols=40 Identities=8% Similarity=0.286 Sum_probs=36.5
Q ss_pred CCcCCCCCCCEEEEEccCCCCccccCc----hhHHHHHHHHhHh
Q psy15857 163 NTYSIPLHADFLMAYSTISDSPMFGQR----FGLKDKCSKVVSK 202 (455)
Q Consensus 163 ~~~~iP~~aD~Li~yST~pG~vS~R~~----~fIq~Lc~~~~~~ 202 (455)
....+|.+||||++|||+|||+||||+ ||||+||+.|.+.
T Consensus 7 ~~~~iP~~aDfL~~yST~pG~~S~R~~~~GSwFIq~Lc~~l~~~ 50 (105)
T 1pyo_B 7 PKMRLPTRSDMICGYACLKGTAAMRNTKRGSWYIEALAQVFSER 50 (105)
T ss_dssp CCCEECSSCSEEEEESSCTTBCCEEETTTEEHHHHHHHHHHHHH
T ss_pred cccCcCCCCCEEEEEeCCCCcEEEecCCCCCHHHHHHHHHHHHH
Confidence 457899999999999999999999986 8999999988774
No 41
>2ql9_B Caspase-7; cysteine protease, apoptosis, thiol protease, zymogen, hydro hydrolase inhibitor complex; HET: CIT; 2.14A {Homo sapiens} PDB: 2ql7_B* 2ql5_B* 2qlb_B* 2qlf_B 2qlj_B* 3edr_B 3ibc_B 3ibf_B 1i51_B
Probab=99.00 E-value=1.5e-10 Score=96.60 Aligned_cols=40 Identities=33% Similarity=0.550 Sum_probs=34.7
Q ss_pred CCcCCCCCCCEEEEEccCCCCccccCc----hhHHHHHHHHhHh
Q psy15857 163 NTYSIPLHADFLMAYSTISDSPMFGQR----FGLKDKCSKVVSK 202 (455)
Q Consensus 163 ~~~~iP~~aD~Li~yST~pG~vS~R~~----~fIq~Lc~~~~~~ 202 (455)
...++|.+||||++|||+|||+||||+ ||||+||+.|.+.
T Consensus 3 ~~~~iP~~aDfL~~yST~pG~~S~R~~~~GSwfIq~Lc~~l~~~ 46 (97)
T 2ql9_B 3 PRYKIPVEADFLFAYSTVPGYYSWRSPGRGSWFVQALCSILEEH 46 (97)
T ss_dssp ---CBCTTTTEEEEESSCTTBCCEEETTTEEHHHHHHHHHHHHH
T ss_pred CCcccCCCCCEEEEEeCCCCcEeeecCCCCCeeHHHHHHHHHHh
Confidence 356899999999999999999999986 8999999988774
No 42
>2dko_B Caspase-3; low barrier hydrogen bond, caspase, drug design, radiation D tetrahedral intermediate, protease; 1.06A {Homo sapiens} PDB: 2c2k_B* 2c2m_B* 2c2o_B* 2c1e_B* 2cdr_B* 2cnk_B* 2cnl_B* 2cnn_B* 2cno_B* 2cjy_B 1pau_B 1re1_B* 1rhk_B* 1rhm_B* 1rhq_B* 1rhr_B* 1rhu_B* 1rhj_B* 1i3o_B* 3edq_B ...
Probab=98.99 E-value=2e-10 Score=96.90 Aligned_cols=40 Identities=28% Similarity=0.423 Sum_probs=36.6
Q ss_pred CCcCCCCCCCEEEEEccCCCCccccCc----hhHHHHHHHHhHh
Q psy15857 163 NTYSIPLHADFLMAYSTISDSPMFGQR----FGLKDKCSKVVSK 202 (455)
Q Consensus 163 ~~~~iP~~aD~Li~yST~pG~vS~R~~----~fIq~Lc~~~~~~ 202 (455)
.+.++|.+||||++|||+|||+||||+ ||||+||+.|.+.
T Consensus 9 ~~~~iP~~aDfL~~yST~pG~vS~R~~~~GSwfIq~Lc~~l~~~ 52 (103)
T 2dko_B 9 ACHKIPVEADFLYAYSTAPGYYSWRNSKDGSWFIQSLCAMLKQY 52 (103)
T ss_dssp SSCCCCTTTTEEEEESSCTTBCCEEETTTEEHHHHHHHHHHHHH
T ss_pred cccccCCCCCEEEEEeCCCCcEeEEcCCCCCeeHHHHHHHHHHh
Confidence 467899999999999999999999986 8999999988764
No 43
>1qtn_B Caspase-8; apoptosis, dithiane-DIOL, caspase, cysteine-protease, hydrol hydrolase inhibitor complex; 1.20A {Homo sapiens} SCOP: c.17.1.1 PDB: 3kjn_B* 3kjq_B* 2y1l_B 1f9e_B* 1qdu_B*
Probab=98.99 E-value=2.2e-10 Score=95.32 Aligned_cols=39 Identities=23% Similarity=0.474 Sum_probs=35.8
Q ss_pred CcCCCCCCCEEEEEccCCCCccccCc----hhHHHHHHHHhHh
Q psy15857 164 TYSIPLHADFLMAYSTISDSPMFGQR----FGLKDKCSKVVSK 202 (455)
Q Consensus 164 ~~~iP~~aD~Li~yST~pG~vS~R~~----~fIq~Lc~~~~~~ 202 (455)
..++|.+||||++|||+|||+||||+ ||||+||+.|.+.
T Consensus 6 ~~~iP~~aDfL~~ysT~pG~~S~R~~~~GSwfIq~Lc~~l~~~ 48 (95)
T 1qtn_B 6 TRYIPDEADFLLGMATVNNCVSYRNPAEGTWYIQSLCQSLRER 48 (95)
T ss_dssp CCCCCTTCSEEEEESSCTTBCCEEETTTEEHHHHHHHHHHHHH
T ss_pred ccccCCCCCEEEEEeCCCCcEEEecCCCCcHHHHHHHHHHHHh
Confidence 56899999999999999999999986 8999999988773
No 44
>3rjm_B Caspase-2; caspase-2, caspase, hydrolase-hydrolase inhibitor; HET: 3PX; 2.55A {Homo sapiens}
Probab=98.97 E-value=2.6e-10 Score=98.37 Aligned_cols=54 Identities=9% Similarity=0.204 Sum_probs=42.5
Q ss_pred CCcCCCCCCCEEEEEccCCCCccccCc----hhHHHHHHHHhHhH----HHHhhhcccCCCC
Q psy15857 163 NTYSIPLHADFLMAYSTISDSPMFGQR----FGLKDKCSKVVSKT----YQVMSSNVDTSNG 216 (455)
Q Consensus 163 ~~~~iP~~aD~Li~yST~pG~vS~R~~----~fIq~Lc~~~~~~~----~~~m~~~~~~~~~ 216 (455)
...+||.+||||++|||+|||+|||++ ||||+||+.|.+.. ..-|..+|.+.+.
T Consensus 8 ~~~~iP~eADfL~~yST~pGyvS~R~~~~GSwFIQ~Lc~vl~~~~~~~dLl~ilT~Vn~~Va 69 (117)
T 3rjm_B 8 PKMRLPTRSDMICGYACLKGTAAMRNTKRGSWYIEALAQVFSERACDMHVADMLVKVNALIK 69 (117)
T ss_dssp CCCCBCSSCSEEEEESSCTTCCCEEETTTEEHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHH
T ss_pred cCccCCCccCEEEEEcCCCCeECeeecCCCChHHHHHHHHHHHhCCCCCHHHHHHHHHHHHH
Confidence 467999999999999999999999986 89999999887653 2234444444443
No 45
>2xzd_B Caspase-3; hydrolase-protein binding complex, de novo protein, apoptosi ankyrin repeat protein, ribosome display; 2.10A {Homo sapiens} PDB: 2xzt_B 2y0b_B
Probab=98.94 E-value=2.7e-10 Score=98.38 Aligned_cols=40 Identities=28% Similarity=0.423 Sum_probs=36.0
Q ss_pred CCcCCCCCCCEEEEEccCCCCccccCc----hhHHHHHHHHhHh
Q psy15857 163 NTYSIPLHADFLMAYSTISDSPMFGQR----FGLKDKCSKVVSK 202 (455)
Q Consensus 163 ~~~~iP~~aD~Li~yST~pG~vS~R~~----~fIq~Lc~~~~~~ 202 (455)
...+||.+||||++|||+|||+|||++ ||||+||+.|.+.
T Consensus 8 ~~~~iP~~aDfLi~yST~pG~vS~R~~~~GSwFIQ~Lc~vl~~~ 51 (118)
T 2xzd_B 8 ACHKIPVEADFLYAYSTAPGYYSWRNSKDGSWFIQSLCAMLKQY 51 (118)
T ss_dssp -CCEECTTTTEEEEESSCTTBCCCEETTTEEHHHHHHHHHHHHH
T ss_pred cccccCCCCCEEEEEeCCCCCEeeEeCCCCCccHHHHHHHHHHh
Confidence 457899999999999999999999986 8999999988764
No 46
>4af8_A Metacaspase MCA2; hydrolase, cysteine peptidase, caspase/hemoglobin fold; 1.40A {Trypanosoma brucei} PDB: 4afp_A 4afv_A 4afr_A
Probab=98.82 E-value=1.2e-07 Score=96.52 Aligned_cols=161 Identities=11% Similarity=0.074 Sum_probs=109.9
Q ss_pred CCceeEEEEEeCCCCCCCCCCCCCChHHhHHHHHHHHHhCCcEE---EEec----------CCCHHHHHHHHHHHHhhcC
Q psy15857 21 HKHRGLALIFNHEHFDSPHLKSRAGTGADFENLYTTLVNLGFVV---KPYH----------DPEFKVIQNAIDEAAEQDY 87 (455)
Q Consensus 21 ~~~~G~aLIInN~~F~~~~l~~R~Gs~~D~~~L~~~F~~LGF~V---~~~~----------nlt~~em~~~l~~~s~~d~ 87 (455)
..++.+||+|.+.+|.. ..+..|+.+|++.|+++|+++||.+ .+.. ++|.+.|.+.|+.+.+. .
T Consensus 89 ~~grr~ALlIGIn~Y~~--~~~L~g~vnDA~~m~~~L~~~GF~~~~i~~L~D~~~~p~~~~~pTr~nI~~aL~~L~~~-a 165 (367)
T 4af8_A 89 PGQTVRALFIGINYYGT--SAALSGCCNDVKQMLATLQKRGLPINEAVILVDEDNFPGRTDQPTRDNIVRYMAWLVKD-A 165 (367)
T ss_dssp TTCCEEEEEEECCCTTS--TTCCSSHHHHHHHHHHHHHHTTCCCSEEEEEECCTTCTTCCBCCCHHHHHHHHHHHHHT-C
T ss_pred CCCCeEEEEEEeCCCCC--ccCCCCHHHHHHHHHHHHHHcCCCchheEEecccccccccccCCCHHHHHHHHHHHHHh-C
Confidence 35788999999998873 5677899999999999999999963 4443 58999999999999864 4
Q ss_pred CCCceEEEEEecCCCC--c----------eeeeeC----CccChhhhHHhhccccccccCCCceEEEEecccCCc-cCCC
Q psy15857 88 TDADCFVMAVLTHGED--G----------ILHAKD----VPYKPKNLWSKFTADNCLTLAGKPKLFFIQACQGDK-LDAG 150 (455)
Q Consensus 88 ~~~d~~vvvilSHG~~--g----------~I~g~D----~~v~~~~I~~~F~~~~c~~L~gKPKlFfiQACRG~~-~d~g 150 (455)
..-|.++++|.+||.+ + .|++.| +.|.-++|.+.+-.. .| .++-.++|+++|-... .+..
T Consensus 166 ~pgD~l~fyFSGHG~q~~d~~de~dg~De~LvP~D~~~~g~I~ddeL~~lLv~~-l~--~g~~v~vIlD~ChSGt~~dlp 242 (367)
T 4af8_A 166 KPGDVLFFHYSGHGTQCKSRGDSDEKYDQCIAPVDFQKSGCIVDDDIHKLLFSR-LP--EKVRLTAVFDCGHSGSIMDLP 242 (367)
T ss_dssp CTTCEEEEEEESCEEEECCC-----CCEEEECCTTHHHHCCEEHHHHHHHHTTT-CC--TTCEEEEEEECTTCCCCTTCS
T ss_pred CCCCEEEEEEcCCcCccCCCCCCCCCcceEEEeecCCcCCCccHHHHHHHHHHh-cc--CCCEEEEEEeCCCCCcccccc
Confidence 4569999999999983 1 367777 346667888874321 11 3667799999998443 3322
Q ss_pred ceeeec--cCCCC-CCC----cCCCCCCCEEEEEccCCCCcccc
Q psy15857 151 VTIRTQ--VDGHP-SNT----YSIPLHADFLMAYSTISDSPMFG 187 (455)
Q Consensus 151 v~~~~~--~d~~~-~~~----~~iP~~aD~Li~yST~pG~vS~R 187 (455)
...... .++.. ... ..-+..+|+++.-|+.++..|..
T Consensus 243 ~~~~~r~~~~~~~~~~~~~~~~~~~~~~~vi~~Sac~d~QtSad 286 (367)
T 4af8_A 243 FTYVCSGGEQASGTPHMKRIREGNDVLGDVMMISGCADEQTSAD 286 (367)
T ss_dssp EEEECCTTCCTTSCCCCEECSSCCCCCSEEEEEEEECCCSCCCC
T ss_pred cccccccccccccchhhhhhccCCCCCCCEEEEEecCCCCchhh
Confidence 211100 11100 000 11134578888888888888876
No 47
>3uoa_B Mucosa-associated lymphoid tissue lymphoma transl protein 1; paracaspase, lymphoma, NF-KB signalling, caspase fold, immun fold, hydrolase-hydrolase inhibitor complex; 1.75A {Homo sapiens} PDB: 3uo8_B 3v55_A 3v4l_A* 3v4o_A*
Probab=98.62 E-value=9.9e-08 Score=97.88 Aligned_cols=106 Identities=16% Similarity=0.159 Sum_probs=81.3
Q ss_pred CcceEEEEEeCCCCCCCCCCCCCCChHhHHHHHHHHhhcCCEEEEecCccHHHHHHHhhcCCCcccccccccccccCCCC
Q psy15857 296 KHRGLALIFNHEHFDSPHLKSRAGTGADFENLYTTLVNLGFVVKPYHDPEFKVIQNAIDEGPVAKSTVEKDADYYRMDHK 375 (455)
Q Consensus 296 ~~rG~~lI~n~~~F~~~~l~~R~Gt~~D~~~l~~~~~~Lgf~V~~~~d~~~~~i~~~l~k~~~~~s~~~~~~~~Y~m~~~ 375 (455)
..|++||||+|.+|. .++++.|+..|+++|.++|++|||+|.++.|+|+++|.+.|++ ..... .
T Consensus 3 A~~r~ALIIGn~~Y~--~~~~L~ga~~DA~~L~~~L~~lGF~V~~l~DlT~~eI~~aL~~-------------f~~~~-~ 66 (390)
T 3uoa_B 3 AKDKVALLIGNMNYR--EHPKLKAPLVDVYELTNLLRQLDFKVVSLLDLTEYEMRNAVDE-------------FLLLL-D 66 (390)
T ss_dssp BSCEEEEEEECCCCS--SSCCCSTHHHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHH-------------HHHTC-C
T ss_pred CCCCEEEEEEecCCC--CcccCCChHHHHHHHHHHHHHcCCeEEEeecCCHHHHHHHHHH-------------HHhhC-C
Confidence 468999999999997 4678999999999999999999999999999999999999983 33333 2
Q ss_pred cccEEEEEEeccCCC--CC--CCC-------CCCcHHhHHHHHHHHHhcCCeE
Q psy15857 376 HRGLALIFNHEHFDS--PH--LKS-------RAGTGADFENLYTTLVNLGFVV 417 (455)
Q Consensus 376 ~~g~~lIin~~~F~~--~~--l~~-------R~Gs~~D~e~L~~~F~~LgF~V 417 (455)
+.+++++.-..|+.. +. +.+ +.++-++.+.|...|+.+.=++
T Consensus 67 ~~D~~l~yfsGHG~~~~g~~yL~p~Da~~~~~~~~~isl~~Ll~~l~~~~~K~ 119 (390)
T 3uoa_B 67 KGVYGLLYYAGHGYENFGNSFMVPVDAPNPYRSENCLCVQNILKLMQEKETGL 119 (390)
T ss_dssp TTCEEEEEEESCEEEETTEEEECCTTCCSSCCGGGSEEHHHHHHHHHHTTCSE
T ss_pred CCCEEEEEEecCccccCCcceEEecCCCccccccceeeHHHHHHHHHhcCCCc
Confidence 458888887788753 11 122 2334467788888887665443
No 48
>4f6o_A Metacaspase-1; rossmann fold, hydrolase; HET: DFH; 1.68A {Saccharomyces cerevisiae}
Probab=98.56 E-value=4.7e-07 Score=91.68 Aligned_cols=117 Identities=18% Similarity=0.270 Sum_probs=89.5
Q ss_pred CceeEEEEEeCCCCCCCCCCCCCChHHhHHHHHHHHHh-CCcE---EEEecC--------CCHHHHHHHHHHHHhhcCCC
Q psy15857 22 KHRGLALIFNHEHFDSPHLKSRAGTGADFENLYTTLVN-LGFV---VKPYHD--------PEFKVIQNAIDEAAEQDYTD 89 (455)
Q Consensus 22 ~~~G~aLIInN~~F~~~~l~~R~Gs~~D~~~L~~~F~~-LGF~---V~~~~n--------lt~~em~~~l~~~s~~d~~~ 89 (455)
.++.+||+|.+..|. ...+..|+.+|++.|+++|++ +||. |.+..| +|.+.|.+.|+.+.+. ...
T Consensus 51 ~grr~ALlIGIn~Y~--~~~~L~g~vnDA~~m~~~L~~~~Gf~~~~I~lLtd~~~~~~~~pTr~nI~~aL~~L~~~-a~p 127 (350)
T 4f6o_A 51 TGRRKALIIGINYIG--SKNQLRGCINDAHNIFNFLTNGYGYSSDDIVILTDDQNDLVRVPTRANMIRAMQWLVKD-AQP 127 (350)
T ss_dssp CSCEEEEEEECCCTT--STTCCSSHHHHHHHHHHHHHHHSCCCGGGEEEEETTSSCGGGSCCHHHHHHHHHHHHTT-CCT
T ss_pred CCCEEEEEEEeCCCC--CCCCCCCHHHHHHHHHHHHHHhcCCCccceeeecccccccccCCCHHHHHHHHHHHHHh-CCC
Confidence 478899999998775 466789999999999999987 7996 566655 8999999999999864 445
Q ss_pred CceEEEEEecCCCC-------------ceeeeeC----CccChhhhHHhhccccccccCCCceE-EEEecccCC
Q psy15857 90 ADCFVMAVLTHGED-------------GILHAKD----VPYKPKNLWSKFTADNCLTLAGKPKL-FFIQACQGD 145 (455)
Q Consensus 90 ~d~~vvvilSHG~~-------------g~I~g~D----~~v~~~~I~~~F~~~~c~~L~gKPKl-FfiQACRG~ 145 (455)
-|.++++|.+||.+ ..|+..| +.|.-++|...+.. .|...-+| +|+++|-..
T Consensus 128 gD~llfYFSGHG~q~~d~~gdE~dG~De~lvP~D~~~~g~I~ddeL~~~L~~----~l~~g~~vt~IlD~ChSG 197 (350)
T 4f6o_A 128 NDSLFLHYSGHGGQTEDLDGDEEDGMDDVIYPVDFETQGPIIDDEMHDIMVK----PLQQGVRLTALFDSCHSG 197 (350)
T ss_dssp TCEEEEEEESCEEEC-----------CEEECCTTHHHHCCEEHHHHHHHHTT----TCCTTCEEEEEECSSSCT
T ss_pred CCEEEEEEcCCceeccCCCCCcccCCceEEEeccCCcCCcccHHHHHHHHHh----hcCCCCeEEEEEccCCCC
Confidence 69999999999973 1366777 34666678776642 13323354 999999743
No 49
>3bij_A Uncharacterized protein GSU0716; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.50A {Geobacter sulfurreducens pca}
Probab=95.56 E-value=0.047 Score=53.25 Aligned_cols=74 Identities=20% Similarity=0.272 Sum_probs=60.6
Q ss_pred cccEEEEEEeccCCC----CCCCCCCCcHHhHHHHHHHHHhcCCeEEEec--CCCHHHHHHHHHh-----cCCcEEEEEE
Q psy15857 376 HRGLALIFNHEHFDS----PHLKSRAGTGADFENLYTTLVNLGFVVKPYH--DPEFKVIQNAIDE-----GKDALIPSLF 444 (455)
Q Consensus 376 ~~g~~lIin~~~F~~----~~l~~R~Gs~~D~e~L~~~F~~LgF~V~~~~--dlt~~eI~~~l~~-----~~~~cfv~~i 444 (455)
++..+|+|-+..|.. +....-.|+..|++.|.++|+.+||.|.+.. ++|.+.|...|+. ...|.+++.+
T Consensus 2 ~~~~ALlIGi~~Y~~~~Y~~~~~~L~~~~nDa~~~~~~L~~~Gf~v~~l~~~~~t~~~i~~al~~l~~~~~~~D~~~~yf 81 (285)
T 3bij_A 2 PKGIALALGLNAVDPKHYGGWAGKLNACEADAEDMAAIAAERGFAVTTLMTKAATRAKVIDAIGKAAKALGKGDIFMLSY 81 (285)
T ss_dssp CCEEEEEEECSCCCTTTTTTCCCCCSSHHHHHHHHHHHHHHTTCEEEEEEGGGCCHHHHHHHHHHHHHHCCTTCEEEEEE
T ss_pred CceEEEEEEeCCccccccCCCcccCCCCHHHHHHHHHHHHHcCCceEEecCCccCHHHHHHHHHHHHHhCCCCCEEEEEE
Confidence 356788888888653 2456778999999999999999999976553 5799999999887 5678899999
Q ss_pred ecccC
Q psy15857 445 LPHSN 449 (455)
Q Consensus 445 lSHG~ 449 (455)
..||.
T Consensus 82 SGHG~ 86 (285)
T 3bij_A 82 SGHGG 86 (285)
T ss_dssp ESCEE
T ss_pred cCCcc
Confidence 99995
No 50
>4f6o_A Metacaspase-1; rossmann fold, hydrolase; HET: DFH; 1.68A {Saccharomyces cerevisiae}
Probab=91.60 E-value=0.76 Score=46.23 Aligned_cols=73 Identities=19% Similarity=0.216 Sum_probs=57.7
Q ss_pred CcccEEEEEEeccCCCCCCCCCCCcHHhHHHHHHHHHh-cCCe---EEEecC--------CCHHHHHHHHHh-----cCC
Q psy15857 375 KHRGLALIFNHEHFDSPHLKSRAGTGADFENLYTTLVN-LGFV---VKPYHD--------PEFKVIQNAIDE-----GKD 437 (455)
Q Consensus 375 ~~~g~~lIin~~~F~~~~l~~R~Gs~~D~e~L~~~F~~-LgF~---V~~~~d--------lt~~eI~~~l~~-----~~~ 437 (455)
..+..+|+|-...+. ....-.|+..|++.|.++|.. +||. |.+..| +|.+.|.+.|+. ...
T Consensus 51 ~grr~ALlIGIn~Y~--~~~~L~g~vnDA~~m~~~L~~~~Gf~~~~I~lLtd~~~~~~~~pTr~nI~~aL~~L~~~a~pg 128 (350)
T 4f6o_A 51 TGRRKALIIGINYIG--SKNQLRGCINDAHNIFNFLTNGYGYSSDDIVILTDDQNDLVRVPTRANMIRAMQWLVKDAQPN 128 (350)
T ss_dssp CSCEEEEEEECCCTT--STTCCSSHHHHHHHHHHHHHHHSCCCGGGEEEEETTSSCGGGSCCHHHHHHHHHHHHTTCCTT
T ss_pred CCCEEEEEEEeCCCC--CCCCCCCHHHHHHHHHHHHHHhcCCCccceeeecccccccccCCCHHHHHHHHHHHHHhCCCC
Confidence 455677777776653 345678999999999999976 6996 445554 899999999987 467
Q ss_pred cEEEEEEecccC
Q psy15857 438 ALIPSLFLPHSN 449 (455)
Q Consensus 438 ~cfv~~ilSHG~ 449 (455)
|.+++.+.-||.
T Consensus 129 D~llfYFSGHG~ 140 (350)
T 4f6o_A 129 DSLFLHYSGHGG 140 (350)
T ss_dssp CEEEEEEESCEE
T ss_pred CEEEEEEcCCce
Confidence 889999999996
No 51
>4af8_A Metacaspase MCA2; hydrolase, cysteine peptidase, caspase/hemoglobin fold; 1.40A {Trypanosoma brucei} PDB: 4afp_A 4afv_A 4afr_A
Probab=89.86 E-value=1.7 Score=44.06 Aligned_cols=73 Identities=14% Similarity=0.137 Sum_probs=56.9
Q ss_pred CcccEEEEEEeccCCCCCCCCCCCcHHhHHHHHHHHHhcCCeE---EEec----------CCCHHHHHHHHHh-----cC
Q psy15857 375 KHRGLALIFNHEHFDSPHLKSRAGTGADFENLYTTLVNLGFVV---KPYH----------DPEFKVIQNAIDE-----GK 436 (455)
Q Consensus 375 ~~~g~~lIin~~~F~~~~l~~R~Gs~~D~e~L~~~F~~LgF~V---~~~~----------dlt~~eI~~~l~~-----~~ 436 (455)
..+..+|+|-...+.. ...-.|+..|++.+.++|+.+||.+ .+.. ++|.+.|.+.|+. ..
T Consensus 90 ~grr~ALlIGIn~Y~~--~~~L~g~vnDA~~m~~~L~~~GF~~~~i~~L~D~~~~p~~~~~pTr~nI~~aL~~L~~~a~p 167 (367)
T 4af8_A 90 GQTVRALFIGINYYGT--SAALSGCCNDVKQMLATLQKRGLPINEAVILVDEDNFPGRTDQPTRDNIVRYMAWLVKDAKP 167 (367)
T ss_dssp TCCEEEEEEECCCTTS--TTCCSSHHHHHHHHHHHHHHTTCCCSEEEEEECCTTCTTCCBCCCHHHHHHHHHHHHHTCCT
T ss_pred CCCeEEEEEEeCCCCC--ccCCCCHHHHHHHHHHHHHHcCCCchheEEecccccccccccCCCHHHHHHHHHHHHHhCCC
Confidence 3455677776666642 3456699999999999999999964 3332 5899999999987 56
Q ss_pred CcEEEEEEecccC
Q psy15857 437 DALIPSLFLPHSN 449 (455)
Q Consensus 437 ~~cfv~~ilSHG~ 449 (455)
.|.+++.+.-||.
T Consensus 168 gD~l~fyFSGHG~ 180 (367)
T 4af8_A 168 GDVLFFHYSGHGT 180 (367)
T ss_dssp TCEEEEEEESCEE
T ss_pred CCEEEEEEcCCcC
Confidence 7889999999996
No 52
>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A
Probab=45.50 E-value=49 Score=31.70 Aligned_cols=80 Identities=13% Similarity=0.055 Sum_probs=51.3
Q ss_pred hHHhHHHHHHHHHhCCcEEEEecCCCHHHHHHHHHHHHhhcCCCCceEEEEEecCCCCceeeeeCCccChhhhHHhhccc
Q psy15857 46 TGADFENLYTTLVNLGFVVKPYHDPEFKVIQNAIDEAAEQDYTDADCFVMAVLTHGEDGILHAKDVPYKPKNLWSKFTAD 125 (455)
Q Consensus 46 s~~D~~~L~~~F~~LGF~V~~~~nlt~~em~~~l~~~s~~d~~~~d~~vvvilSHG~~g~I~g~D~~v~~~~I~~~F~~~ 125 (455)
+..-.+.+...|++.|+++++..--...+..+..+++.+ .+|+++ +.|-|| .+.++.+.+...
T Consensus 24 ~~~~~~~i~~~l~~~~~~~~~~~t~~~~~a~~~~~~~~~----~~d~vv-----------~~GGDG--Tl~~v~~~l~~~ 86 (304)
T 3s40_A 24 LHTNLTKIVPPLAAAFPDLHILHTKEQGDATKYCQEFAS----KVDLII-----------VFGGDG--TVFECTNGLAPL 86 (304)
T ss_dssp HHHHHHHHHHHHHHHCSEEEEEECCSTTHHHHHHHHHTT----TCSEEE-----------EEECHH--HHHHHHHHHTTC
T ss_pred hHHHHHHHHHHHHHcCCeEEEEEccCcchHHHHHHHhhc----CCCEEE-----------EEccch--HHHHHHHHHhhC
Confidence 345567899999999999988865556666666666532 455433 335577 445666655431
Q ss_pred cccccCCCceEEEEecccCCcc
Q psy15857 126 NCLTLAGKPKLFFIQACQGDKL 147 (455)
Q Consensus 126 ~c~~L~gKPKlFfiQACRG~~~ 147 (455)
..+|.|-+|.+=.|+.+
T Consensus 87 -----~~~~~l~iiP~Gt~N~~ 103 (304)
T 3s40_A 87 -----EIRPTLAIIPGGTCNDF 103 (304)
T ss_dssp -----SSCCEEEEEECSSCCHH
T ss_pred -----CCCCcEEEecCCcHHHH
Confidence 14577888888665544
No 53
>2hjv_A ATP-dependent RNA helicase DBPA; parallel alpha-beta, hydrolase; 1.95A {Bacillus subtilis}
Probab=43.22 E-value=1.5e+02 Score=24.98 Aligned_cols=49 Identities=18% Similarity=0.213 Sum_probs=40.6
Q ss_pred eeEEEEEeCCCCCCCCCCCCCChHHhHHHHHHHHHhCCcEEEEec-CCCHHHHHHHHHHHHhh
Q psy15857 24 RGLALIFNHEHFDSPHLKSRAGTGADFENLYTTLVNLGFVVKPYH-DPEFKVIQNAIDEAAEQ 85 (455)
Q Consensus 24 ~G~aLIInN~~F~~~~l~~R~Gs~~D~~~L~~~F~~LGF~V~~~~-nlt~~em~~~l~~~s~~ 85 (455)
.+.+|||.| +...++.|.+.|+++|+.+..+. +++..+-...++.|...
T Consensus 35 ~~~~lVF~~-------------~~~~~~~l~~~L~~~~~~~~~~hg~~~~~~r~~~~~~f~~g 84 (163)
T 2hjv_A 35 PDSCIIFCR-------------TKEHVNQLTDELDDLGYPCDKIHGGMIQEDRFDVMNEFKRG 84 (163)
T ss_dssp CSSEEEECS-------------SHHHHHHHHHHHHHTTCCEEEECTTSCHHHHHHHHHHHHTT
T ss_pred CCcEEEEEC-------------CHHHHHHHHHHHHHcCCcEEEEeCCCCHHHHHHHHHHHHcC
Confidence 456888876 55889999999999999987654 79999999999999854
No 54
>2rb4_A ATP-dependent RNA helicase DDX25; rossmann fold, structural genomics, structural consortium, SGC, alternative initiation, ATP-binding, devel protein; 2.80A {Homo sapiens}
Probab=42.06 E-value=1.1e+02 Score=26.10 Aligned_cols=50 Identities=18% Similarity=0.185 Sum_probs=41.5
Q ss_pred ceeEEEEEeCCCCCCCCCCCCCChHHhHHHHHHHHHhCCcEEEEe-cCCCHHHHHHHHHHHHhh
Q psy15857 23 HRGLALIFNHEHFDSPHLKSRAGTGADFENLYTTLVNLGFVVKPY-HDPEFKVIQNAIDEAAEQ 85 (455)
Q Consensus 23 ~~G~aLIInN~~F~~~~l~~R~Gs~~D~~~L~~~F~~LGF~V~~~-~nlt~~em~~~l~~~s~~ 85 (455)
+.+.+|||.+ +...++.|.+.|++.|+.+..+ .+++..+-...++.|...
T Consensus 33 ~~~~~lVF~~-------------~~~~~~~l~~~L~~~~~~~~~~~g~~~~~~R~~~~~~f~~g 83 (175)
T 2rb4_A 33 TIGQAIIFCQ-------------TRRNAKWLTVEMIQDGHQVSLLSGELTVEQRASIIQRFRDG 83 (175)
T ss_dssp CCSEEEEECS-------------CHHHHHHHHHHHHTTTCCEEEECSSCCHHHHHHHHHHHHTT
T ss_pred CCCCEEEEEC-------------CHHHHHHHHHHHHHcCCcEEEEeCCCCHHHHHHHHHHHHcC
Confidence 4567999876 4578999999999999998655 479999999999999853
No 55
>1t5i_A C_terminal domain of A probable ATP-dependent RNA helicase; RECA-like fold, PRE-mRNA processing protein; 1.90A {Homo sapiens} SCOP: c.37.1.19
Probab=37.58 E-value=1.9e+02 Score=24.62 Aligned_cols=49 Identities=12% Similarity=0.011 Sum_probs=40.6
Q ss_pred eeEEEEEeCCCCCCCCCCCCCChHHhHHHHHHHHHhCCcEEEEe-cCCCHHHHHHHHHHHHhh
Q psy15857 24 RGLALIFNHEHFDSPHLKSRAGTGADFENLYTTLVNLGFVVKPY-HDPEFKVIQNAIDEAAEQ 85 (455)
Q Consensus 24 ~G~aLIInN~~F~~~~l~~R~Gs~~D~~~L~~~F~~LGF~V~~~-~nlt~~em~~~l~~~s~~ 85 (455)
.+.+|||.| +...++.|.+.|+..|+.+..+ .+++..+-...++.|...
T Consensus 31 ~~~~lVF~~-------------~~~~~~~l~~~L~~~~~~~~~~hg~~~~~~r~~~~~~f~~g 80 (172)
T 1t5i_A 31 FNQVVIFVK-------------SVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDF 80 (172)
T ss_dssp CSSEEEECS-------------SHHHHHHHHHHHHHTTCCEEEECTTSCHHHHHHHHHHHHTT
T ss_pred CCcEEEEEC-------------CHHHHHHHHHHHHhcCCCEEEEECCCCHHHHHHHHHHHHCC
Confidence 456888876 5588999999999999998655 479999999999999853
No 56
>1fuk_A Eukaryotic initiation factor 4A; helicase, DEAD-box protein, translation; 1.75A {Saccharomyces cerevisiae} SCOP: c.37.1.19
Probab=37.52 E-value=1.2e+02 Score=25.71 Aligned_cols=50 Identities=26% Similarity=0.209 Sum_probs=41.1
Q ss_pred ceeEEEEEeCCCCCCCCCCCCCChHHhHHHHHHHHHhCCcEEEEe-cCCCHHHHHHHHHHHHhh
Q psy15857 23 HRGLALIFNHEHFDSPHLKSRAGTGADFENLYTTLVNLGFVVKPY-HDPEFKVIQNAIDEAAEQ 85 (455)
Q Consensus 23 ~~G~aLIInN~~F~~~~l~~R~Gs~~D~~~L~~~F~~LGF~V~~~-~nlt~~em~~~l~~~s~~ 85 (455)
+.+.+|||.+ +...++.|.+.|++.|+.+..+ .+++..+-.+.++.|...
T Consensus 29 ~~~~~lVF~~-------------~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~r~~~~~~f~~g 79 (165)
T 1fuk_A 29 SVTQAVIFCN-------------TRRKVEELTTKLRNDKFTVSAIYSDLPQQERDTIMKEFRSG 79 (165)
T ss_dssp TCSCEEEEES-------------SHHHHHHHHHHHHHTTCCEEEECTTSCHHHHHHHHHHHHTT
T ss_pred CCCCEEEEEC-------------CHHHHHHHHHHHHHcCCCEEEEECCCCHHHHHHHHHHHHcC
Confidence 3466899876 4588999999999999998655 589999999999999753
No 57
>4es1_A BH0342 protein; ferredoxin, nuclease, hydrolase; 1.10A {Bacillus halodurans} PDB: 4es2_A 4es3_A
Probab=34.69 E-value=1.1e+02 Score=24.81 Aligned_cols=69 Identities=9% Similarity=-0.035 Sum_probs=45.4
Q ss_pred HhHHHHHHHHHhCCcEEE--Ee-cCCCHHHHHHHHHHHHhhcCCCCceEEEEEecCCCC--ceeeeeCCccChh
Q psy15857 48 ADFENLYTTLVNLGFVVK--PY-HDPEFKVIQNAIDEAAEQDYTDADCFVMAVLTHGED--GILHAKDVPYKPK 116 (455)
Q Consensus 48 ~D~~~L~~~F~~LGF~V~--~~-~nlt~~em~~~l~~~s~~d~~~~d~~vvvilSHG~~--g~I~g~D~~v~~~ 116 (455)
+=..++.++++..|.-|. ++ -.+|..++.++..++.+.-...-|++.++.+.-... -.++|.+-.++++
T Consensus 22 kR~~kv~k~~~~yg~rvQ~SVFe~~lt~~~~~~L~~~l~~~id~~~Dsv~iy~l~~~~~~~~~~iG~~~~~d~~ 95 (100)
T 4es1_A 22 KRLRKVAKACQNYGQRVQNSVFECIVDSTQLTSLKLELTSLIDEEKDSLRIYRLGNNYKTKVEHIGAKPSIDLE 95 (100)
T ss_dssp HHHHHHHHHHHTTEEEEETTEEEEEECHHHHHHHHHHHHHHSCTTTCEEEEEEECCCSSCCCCCCSCCCC----
T ss_pred HHHHHHHHHHHHhChhheeeEEEEEcCHHHHHHHHHHHHhhcCCCCCEEEEEEcCCCccceEEEECCCCCCCCC
Confidence 345667788888887664 23 479999999988888874334568988888875543 2456665544444
No 58
>3h1t_A Type I site-specific restriction-modification system, R (restriction) subunit; hydrolase, restriction enzyme HSDR, ATP-binding; 2.30A {Vibrio vulnificus}
Probab=34.68 E-value=1.6e+02 Score=30.39 Aligned_cols=105 Identities=16% Similarity=0.105 Sum_probs=66.1
Q ss_pred ceeEEEEEeCCCCCCCCCCCCCChHHhHHHHHHHHHhCCcE--------EEEecCCCHHHHHHHHHHHHhhcCCCCceEE
Q psy15857 23 HRGLALIFNHEHFDSPHLKSRAGTGADFENLYTTLVNLGFV--------VKPYHDPEFKVIQNAIDEAAEQDYTDADCFV 94 (455)
Q Consensus 23 ~~G~aLIInN~~F~~~~l~~R~Gs~~D~~~L~~~F~~LGF~--------V~~~~nlt~~em~~~l~~~s~~d~~~~d~~v 94 (455)
+.+.+|||.| +...++.|.+.|.+++.+ +.....-+.++-.+.+++|...+. ....++
T Consensus 438 ~~~k~lVF~~-------------~~~~a~~l~~~L~~~~~~~~~~~~~~~~~i~g~~~~~r~~~l~~F~~~~~-~~~~il 503 (590)
T 3h1t_A 438 RFAKTIVFCV-------------DQEHADEMRRALNNLNSDLSRKHPDYVARVTSEEGKIGKGHLSRFQELET-STPVIL 503 (590)
T ss_dssp TTSEEEEEES-------------SHHHHHHHHHHHHHHTHHHHTTCTTSEEECSSTTHHHHHHHHHHHHCTTC-CCCCEE
T ss_pred CCccEEEEEC-------------CHHHHHHHHHHHHHhhhhhhccCCCeEEEEeCCChHHHHHHHHHHhCCCC-CCCEEE
Confidence 4478999987 347788899999887653 434443344568888899986432 234455
Q ss_pred EE--EecCCCC----ceeeeeCCccChhhhHHhhccccccccC---CCceEEEEeccc
Q psy15857 95 MA--VLTHGED----GILHAKDVPYKPKNLWSKFTADNCLTLA---GKPKLFFIQACQ 143 (455)
Q Consensus 95 vv--ilSHG~~----g~I~g~D~~v~~~~I~~~F~~~~c~~L~---gKPKlFfiQACR 143 (455)
+. +++-|.. ..|+-.|-.-+...+++..- ++--+. +|...++++.|-
T Consensus 504 vtt~~l~~GiDip~v~~Vi~~~~~~s~~~~~Q~iG--R~~R~~~~~~k~~~~I~D~~g 559 (590)
T 3h1t_A 504 TTSQLLTTGVDAPTCKNVVLARVVNSMSEFKQIVG--RGTRLREDYGKLWFNIIDYTG 559 (590)
T ss_dssp EESSTTTTTCCCTTEEEEEEESCCCCHHHHHHHHT--TSCCCBGGGTBSCEEEEECSS
T ss_pred EECChhhcCccchheeEEEEEecCCChHHHHHHHh--hhcccCccCCCCEEEEEecCC
Confidence 44 5677764 34555555556666555543 122222 789999999883
No 59
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=31.26 E-value=1.9e+02 Score=22.71 Aligned_cols=23 Identities=22% Similarity=0.028 Sum_probs=18.8
Q ss_pred HHhHHHHHHHHHhCCcEEEEecC
Q psy15857 47 GADFENLYTTLVNLGFVVKPYHD 69 (455)
Q Consensus 47 ~~D~~~L~~~F~~LGF~V~~~~n 69 (455)
....+.|+..|++.||.|....+
T Consensus 16 ~~~~~~l~~~l~~~g~~v~~~~~ 38 (140)
T 3grc_A 16 PDIARLLNLMLEKGGFDSDMVHS 38 (140)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECS
T ss_pred HHHHHHHHHHHHHCCCeEEEECC
Confidence 36678899999999999877664
No 60
>2qv7_A Diacylglycerol kinase DGKB; alpha-beta domain 1, beta sandwich domain 2, protein-ADP COM transferase; HET: ADP; 2.30A {Staphylococcus aureus} SCOP: e.52.1.2 PDB: 2qvl_A
Probab=30.99 E-value=1.6e+02 Score=28.37 Aligned_cols=79 Identities=13% Similarity=0.161 Sum_probs=45.9
Q ss_pred hHHhHHHHHHHHHhCCcEEEEecCCCHHHHHHHHHHHHhhcCCCCceEEEEEecCCCCceeeeeCCccChhhhHHhhccc
Q psy15857 46 TGADFENLYTTLVNLGFVVKPYHDPEFKVIQNAIDEAAEQDYTDADCFVMAVLTHGEDGILHAKDVPYKPKNLWSKFTAD 125 (455)
Q Consensus 46 s~~D~~~L~~~F~~LGF~V~~~~nlt~~em~~~l~~~s~~d~~~~d~~vvvilSHG~~g~I~g~D~~v~~~~I~~~F~~~ 125 (455)
+..-.+.+...|++.|+++.+..-....+..+..++... ..+|.++ +.|-|| .+.++.+.+..
T Consensus 40 ~~~~~~~i~~~L~~~g~~~~~~~t~~~~~a~~~~~~~~~---~~~d~vv-----------v~GGDG--Tv~~v~~~l~~- 102 (337)
T 2qv7_A 40 FKRELPDALIKLEKAGYETSAYATEKIGDATLEAERAMH---ENYDVLI-----------AAGGDG--TLNEVVNGIAE- 102 (337)
T ss_dssp HHHHHHHHHHHHHHTTEEEEEEECCSTTHHHHHHHHHTT---TTCSEEE-----------EEECHH--HHHHHHHHHTT-
T ss_pred hHHHHHHHHHHHHHcCCeEEEEEecCcchHHHHHHHHhh---cCCCEEE-----------EEcCch--HHHHHHHHHHh-
Confidence 445567899999999999988765444455544444332 2345433 235577 44555555421
Q ss_pred cccccCCCceEEEEecccCC
Q psy15857 126 NCLTLAGKPKLFFIQACQGD 145 (455)
Q Consensus 126 ~c~~L~gKPKlFfiQACRG~ 145 (455)
....|.|.+|.+=.++
T Consensus 103 ----~~~~~pl~iIP~GT~N 118 (337)
T 2qv7_A 103 ----KPNRPKLGVIPMGTVN 118 (337)
T ss_dssp ----CSSCCEEEEEECSSCC
T ss_pred ----CCCCCcEEEecCCcHh
Confidence 1234667777764444
No 61
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=30.81 E-value=1.1e+02 Score=29.91 Aligned_cols=54 Identities=15% Similarity=0.159 Sum_probs=44.4
Q ss_pred CceeEEEEEeCCCCCCCCCCCCCChHHhHHHHHHHHHhCCcEEEEec---CCCHHHHHHHHHHHHh
Q psy15857 22 KHRGLALIFNHEHFDSPHLKSRAGTGADFENLYTTLVNLGFVVKPYH---DPEFKVIQNAIDEAAE 84 (455)
Q Consensus 22 ~~~G~aLIInN~~F~~~~l~~R~Gs~~D~~~L~~~F~~LGF~V~~~~---nlt~~em~~~l~~~s~ 84 (455)
..+|+|+|.-. +++.|..-++.-.+.++++|+..+.+. +.|.+|+.+.|+++-.
T Consensus 36 ~~P~Lavilvg---------~dpaS~~Yv~~k~k~~~~~Gi~~~~~~lp~~~s~~ell~~I~~lN~ 92 (300)
T 4a26_A 36 RVPGLASIIVG---------QRMDSKKYVQLKHKAAAEVGMASFNVELPEDISQEVLEVNVEKLNN 92 (300)
T ss_dssp CCCEEEEEEES---------CCHHHHHHHHHHHHHHHHTTCEEEEEEECTTCCHHHHHHHHHHHHT
T ss_pred CCceEEEEEeC---------CCHHHHHHHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHhcC
Confidence 45789998643 455688888999999999999987664 8999999999988875
No 62
>1zpw_X Hypothetical protein TT1823; hyphotetical protein, structural genom NPPSFA, national project on protein structural and function analyses; 1.64A {Thermus thermophilus} SCOP: d.58.58.1
Probab=28.81 E-value=1.8e+02 Score=22.70 Aligned_cols=61 Identities=10% Similarity=0.003 Sum_probs=43.2
Q ss_pred HHhHHHHHHHHHhCCcEEE--Ee-cCCCHHHHHHHHHHHHhhcCCCCceEEEEEecCCCCceeeee
Q psy15857 47 GADFENLYTTLVNLGFVVK--PY-HDPEFKVIQNAIDEAAEQDYTDADCFVMAVLTHGEDGILHAK 109 (455)
Q Consensus 47 ~~D~~~L~~~F~~LGF~V~--~~-~nlt~~em~~~l~~~s~~d~~~~d~~vvvilSHG~~g~I~g~ 109 (455)
++...++.+++++.|.-|. ++ -++|..++.+...++.+.-....|++.++-++- .-.++|.
T Consensus 15 ~kr~~kv~k~l~~yg~rvQ~SVFe~~lt~~~~~~L~~~L~~~id~~~Dsv~iy~l~~--~~~~~G~ 78 (90)
T 1zpw_X 15 DTRRVKLANLLKSYGERVQLSVFECYLDERLLEDLRRRARRLLDLGQDALRIYPVAG--QVEVLGV 78 (90)
T ss_dssp HHHHHHHHHHHHTTEEEEETTEEEEEECHHHHHHHHHHHHHHCCTTTCEEEEEECCS--CCCCCSS
T ss_pred hHHHHHHHHHHHHhCccceEeEEEEEcCHHHHHHHHHHHHHhhCCCCCEEEEEEeCC--cEEEECC
Confidence 4778889999999996664 22 478988888877777764223468999988877 3344454
No 63
>2i0x_A Hypothetical protein PF1117; PSI, STRU genomics, southeast collaboratory for structural genomics, structure initiative, secsg; 2.70A {Pyrococcus furiosus} SCOP: d.58.58.1
Probab=28.58 E-value=1.6e+02 Score=22.91 Aligned_cols=61 Identities=7% Similarity=-0.051 Sum_probs=44.2
Q ss_pred HhHHHHHHHHHhCCcEEE--Ee-cCCCHHHHHHHHHHHHhhcCCCCceEEEEEecCCCC-ceeeee
Q psy15857 48 ADFENLYTTLVNLGFVVK--PY-HDPEFKVIQNAIDEAAEQDYTDADCFVMAVLTHGED-GILHAK 109 (455)
Q Consensus 48 ~D~~~L~~~F~~LGF~V~--~~-~nlt~~em~~~l~~~s~~d~~~~d~~vvvilSHG~~-g~I~g~ 109 (455)
+-..++.+++++.|.-|. ++ -++|..++.+...++.+.-..+.|++.++-+. ... -.++|.
T Consensus 12 kR~~kv~k~l~~yg~rvQ~SVFeg~lt~~~~~~L~~~l~~~id~~~Dsv~iy~l~-~~~~~~~~G~ 76 (85)
T 2i0x_A 12 ERVNKVKKFLRMHLNWVQNSVFEGEVTLAEFERIKEGLKKIIDENSDSVIIYKLR-SMPPRETLGI 76 (85)
T ss_dssp SSHHHHHHHHTTTSEEEETTEEEEECCHHHHHHHHHHHHHSSCTTTCEEEEEEES-SCCCCCCCSS
T ss_pred HHHHHHHHHHHHhCcccceeEEEEECCHHHHHHHHHHHHHhcCCCCCEEEEEECC-CcceEEEECC
Confidence 446788899999997775 33 48999999998888887433446999999998 332 244453
No 64
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}
Probab=28.29 E-value=1.3e+02 Score=29.14 Aligned_cols=54 Identities=17% Similarity=0.286 Sum_probs=43.9
Q ss_pred CceeEEEEEeCCCCCCCCCCCCCChHHhHHHHHHHHHhCCcEEEEec---CCCHHHHHHHHHHHHh
Q psy15857 22 KHRGLALIFNHEHFDSPHLKSRAGTGADFENLYTTLVNLGFVVKPYH---DPEFKVIQNAIDEAAE 84 (455)
Q Consensus 22 ~~~G~aLIInN~~F~~~~l~~R~Gs~~D~~~L~~~F~~LGF~V~~~~---nlt~~em~~~l~~~s~ 84 (455)
..+++|+|.-. ++++|..-++.-.+.++++|+..+.+. +.|.+|+.+.|+++-+
T Consensus 34 ~~P~Lavilvg---------~dpaS~~Yv~~k~k~~~~~Gi~~~~~~lp~~~s~~ell~~I~~lN~ 90 (286)
T 4a5o_A 34 RVPGLAVILVG---------TDPASQVYVAHKRKDCEEVGFLSQAYDLPAETSQDDLLALIDRLND 90 (286)
T ss_dssp CCCEEEEEEES---------CCHHHHHHHHHHHHHHHHTTCEEEEEEECTTCCHHHHHHHHHHHHT
T ss_pred CCceEEEEEeC---------CCHHHHHHHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHHhC
Confidence 35789988643 445677888999999999999977664 8999999999988875
No 65
>4b4u_A Bifunctional protein fold; oxidoreductase; HET: NAP; 1.45A {Acinetobacter baumannii atcc 19606} PDB: 4b4v_A* 4b4w_A*
Probab=27.55 E-value=1.6e+02 Score=28.75 Aligned_cols=71 Identities=10% Similarity=0.097 Sum_probs=51.0
Q ss_pred CceeEEEEEeCCCCCCCCCCCCCChHHhHHHHHHHHHhCCcEEEEe---cCCCHHHHHHHHHHHHhhcCCCCceEEEE--
Q psy15857 22 KHRGLALIFNHEHFDSPHLKSRAGTGADFENLYTTLVNLGFVVKPY---HDPEFKVIQNAIDEAAEQDYTDADCFVMA-- 96 (455)
Q Consensus 22 ~~~G~aLIInN~~F~~~~l~~R~Gs~~D~~~L~~~F~~LGF~V~~~---~nlt~~em~~~l~~~s~~d~~~~d~~vvv-- 96 (455)
..+++|+|.-. ++++|..-++.-.+..+++|+..+.+ .+.|.+|+.+.|+++-+- ...+-++|-
T Consensus 52 ~~P~LavIlVG---------~dpaS~~Yv~~K~k~c~~vGi~s~~~~lp~~~se~ell~~I~~LN~D--~~V~GIlVQlP 120 (303)
T 4b4u_A 52 RTPILATILVG---------DDGASATYVRMKGNACRRVGMDSLKIELPQETTTEQLLAEIEKLNAN--PDVHGILLQHP 120 (303)
T ss_dssp CCCEEEEEEES---------CCHHHHHHHHHHHHHHHHTTCEEEEEEECTTCCHHHHHHHHHHHHTC--TTCCEEEECSS
T ss_pred CCCcEEEEEeC---------CCHHHHHHHHHHHHHHHHcCCeEEEEecCccCCHHHHHHHHHHhcCC--CCccEEEEeCC
Confidence 46789988754 34567888899999999999997655 588999999999888753 234555544
Q ss_pred EecCCCC
Q psy15857 97 VLTHGED 103 (455)
Q Consensus 97 ilSHG~~ 103 (455)
+-.|=++
T Consensus 121 LP~hid~ 127 (303)
T 4b4u_A 121 VPAQIDE 127 (303)
T ss_dssp CCTTSCH
T ss_pred CccccCh
Confidence 3345443
No 66
>3eaq_A Heat resistant RNA dependent ATPase; DEAD box RNA helicase, dimer, ATP-binding, helicase, hydrolase, nucleotide-binding; 2.30A {Thermus thermophilus} PDB: 3ear_A 3eas_A
Probab=25.31 E-value=90 Score=27.90 Aligned_cols=50 Identities=18% Similarity=0.230 Sum_probs=41.1
Q ss_pred ceeEEEEEeCCCCCCCCCCCCCChHHhHHHHHHHHHhCCcEEEEe-cCCCHHHHHHHHHHHHhh
Q psy15857 23 HRGLALIFNHEHFDSPHLKSRAGTGADFENLYTTLVNLGFVVKPY-HDPEFKVIQNAIDEAAEQ 85 (455)
Q Consensus 23 ~~G~aLIInN~~F~~~~l~~R~Gs~~D~~~L~~~F~~LGF~V~~~-~nlt~~em~~~l~~~s~~ 85 (455)
+.+.+|||.+ +..+++.|.+.|.+.|+.+... .+++.++-...++.|...
T Consensus 30 ~~~~~lVF~~-------------~~~~~~~l~~~L~~~~~~~~~lhg~~~~~~r~~~~~~f~~g 80 (212)
T 3eaq_A 30 SPDRAMVFTR-------------TKAETEEIAQGLLRLGHPAQALHGDLSQGERERVLGAFRQG 80 (212)
T ss_dssp CCSCEEEECS-------------SHHHHHHHHHHHHHHTCCEEEECSSSCHHHHHHHHHHHHSS
T ss_pred CCCeEEEEeC-------------CHHHHHHHHHHHHHcCCCEEEEECCCCHHHHHHHHHHHHCC
Confidence 3567899876 5578999999999999998655 589999999999999753
No 67
>1hqz_1 ABP1P, actin-binding protein; cofilin homology domain, NEW YORK SGX researc for structural genomics, NYSGXRC, structural genomics, PSI; 2.10A {Saccharomyces cerevisiae} SCOP: d.109.1.2
Probab=25.08 E-value=2.6e+02 Score=23.29 Aligned_cols=58 Identities=7% Similarity=0.009 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHHhhcCCCCceEEEEEecCCCCceeeeeCCccChhhhHHhhccccccccCCCceEEEE
Q psy15857 72 FKVIQNAIDEAAEQDYTDADCFVMAVLTHGEDGILHAKDVPYKPKNLWSKFTADNCLTLAGKPKLFFI 139 (455)
Q Consensus 72 ~~em~~~l~~~s~~d~~~~d~~vvvilSHG~~g~I~g~D~~v~~~~I~~~F~~~~c~~L~gKPKlFfi 139 (455)
..++.+.++++..........+++-|-. .+..+...-|. .++++.+.|.. ++|...++
T Consensus 12 ~~e~~~a~~~~~~~~~~~~~~ii~~i~~--~~~i~v~~~g~-~~~el~~~l~~-------~~~rY~~~ 69 (141)
T 1hqz_1 12 SREIDAEYLKIVRGSDPDTTWLIISPNA--KKEYEPESTGS-SFHDFLQLFDE-------TKVQYGLA 69 (141)
T ss_dssp HHHHHHHHHHHHHTCCTTCCEEEEEECT--TSCEEEEEEES-CHHHHHTCCCT-------TSCEEEEE
T ss_pred CHHHHHHHHHHHhCCCCCceEEEEEEcC--CCEEEEEeecC-CHHHHHhhCCC-------CceEEEEE
Confidence 5889999999876522334445555522 23333333344 78888887753 55666665
No 68
>2z8u_A Tata-box-binding protein; transcription, DNA-binding protein, transcription factor, transcription regulation; 1.90A {Methanococcus jannaschii}
Probab=24.93 E-value=7.9 Score=35.40 Aligned_cols=50 Identities=18% Similarity=0.231 Sum_probs=36.2
Q ss_pred cccccCCCCcceEEEEEeCCCCCCCCCCCCCCChHhHHHHHHHHhhcCCEE
Q psy15857 288 ADYYRMDHKHRGLALIFNHEHFDSPHLKSRAGTGADFENLYTTLVNLGFVV 338 (455)
Q Consensus 288 ~~~Y~m~~~~rG~~lI~n~~~F~~~~l~~R~Gt~~D~~~l~~~~~~Lgf~V 338 (455)
+-.|+|. +|+..++||.+=+.-..|.++......=+..+.+.|++|||++
T Consensus 49 gli~Rl~-~Pk~t~lIF~SGKiv~TGAkS~e~a~~a~~~~~~~L~~lg~~~ 98 (188)
T 2z8u_A 49 GLVCRLS-VPKVALLIFRSGKVNCTGAKSKEEAEIAIKKIIKELKDAGIDV 98 (188)
T ss_dssp CEEEEET-TTTEEEEECTTSEEEEEEESSHHHHHHHHHHHHHHHHHTTCCC
T ss_pred cEEEEcC-CCcEEEEEeCCCeEEEecCCCHHHHHHHHHHHHHHHHhcCCCc
Confidence 3457874 6789999999887765455555444455677888899999975
No 69
>3mos_A Transketolase, TK; thiamin diphosphate TPP THDP enzyme catalysis sugar metaboli transferase; HET: TPP; 1.75A {Homo sapiens} PDB: 3ooy_A*
Probab=24.82 E-value=1.4e+02 Score=31.71 Aligned_cols=67 Identities=10% Similarity=0.098 Sum_probs=40.6
Q ss_pred eEEEEEeCCCCCCCCCCCCCChHHhHHHHHHHHHhCCcEEEEecCCCHHHHHHHHHHHHhhcCCCCceEEEEEec
Q psy15857 25 GLALIFNHEHFDSPHLKSRAGTGADFENLYTTLVNLGFVVKPYHDPEFKVIQNAIDEAAEQDYTDADCFVMAVLT 99 (455)
Q Consensus 25 G~aLIInN~~F~~~~l~~R~Gs~~D~~~L~~~F~~LGF~V~~~~nlt~~em~~~l~~~s~~d~~~~d~~vvvilS 99 (455)
-+.+|+||..+.- ............+.+.|+.+|+.+.....-+.+++.++|++. .+-.+++.+..-
T Consensus 175 ~livi~nnN~~~i---~~~~~~~~~~~~~~~~~~a~G~~~~~VdG~d~~~l~~al~~~-----~~~P~lI~v~T~ 241 (616)
T 3mos_A 175 NLVAILDINRLGQ---SDPAPLQHQMDIYQKRCEAFGWHAIIVDGHSVEELCKAFGQA-----KHQPTAIIAKTF 241 (616)
T ss_dssp TEEEEEEECSBCS---SSBCTTTTCHHHHHHHHHHTTCEEEEEETTCHHHHHHHHHSC-----CSSCEEEEEECC
T ss_pred cEEEEEECCCCCC---cCCcccccChHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHhc-----CCCCEEEEEEEe
Confidence 3677777766642 222222223467788999999998755445677888887432 233455555543
No 70
>2p6n_A ATP-dependent RNA helicase DDX41; DEAD, structural genomics, structural genomic consortium, SGC, hydrolase; 2.60A {Homo sapiens}
Probab=24.65 E-value=1.2e+02 Score=26.70 Aligned_cols=48 Identities=21% Similarity=0.187 Sum_probs=38.9
Q ss_pred eEEEEEeCCCCCCCCCCCCCChHHhHHHHHHHHHhCCcEEEEe-cCCCHHHHHHHHHHHHhh
Q psy15857 25 GLALIFNHEHFDSPHLKSRAGTGADFENLYTTLVNLGFVVKPY-HDPEFKVIQNAIDEAAEQ 85 (455)
Q Consensus 25 G~aLIInN~~F~~~~l~~R~Gs~~D~~~L~~~F~~LGF~V~~~-~nlt~~em~~~l~~~s~~ 85 (455)
+.+|||.+ +...++.|.+.|+..|+.+..+ .+++.++-.+.+++|...
T Consensus 55 ~~~lVF~~-------------~~~~~~~l~~~L~~~g~~~~~lhg~~~~~~R~~~l~~F~~g 103 (191)
T 2p6n_A 55 PPVLIFAE-------------KKADVDAIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFREG 103 (191)
T ss_dssp SCEEEECS-------------CHHHHHHHHHHHHHHTCCEEEECTTSCHHHHHHHHHHHHHT
T ss_pred CCEEEEEC-------------CHHHHHHHHHHHHHcCCcEEEEeCCCCHHHHHHHHHHHhcC
Confidence 35788765 5588999999999999987655 579999999999999864
No 71
>1mp9_A Tata-binding protein; transcription regulation, DNA-binding protein, transcription factor, DNA binding protein; 2.00A {Sulfolobus acidocaldarius} SCOP: d.129.1.1 d.129.1.1
Probab=23.97 E-value=13 Score=34.27 Aligned_cols=124 Identities=19% Similarity=0.205 Sum_probs=71.4
Q ss_pred cccccCCCCcceEEEEEeCCCCCCCCCCCCCCChHhHHHHHHHHhhcCCEE------EEec---------CccHHHHHHH
Q psy15857 288 ADYYRMDHKHRGLALIFNHEHFDSPHLKSRAGTGADFENLYTTLVNLGFVV------KPYH---------DPEFKVIQNA 352 (455)
Q Consensus 288 ~~~Y~m~~~~rG~~lI~n~~~F~~~~l~~R~Gt~~D~~~l~~~~~~Lgf~V------~~~~---------d~~~~~i~~~ 352 (455)
+-.|+|. +|+..++||.+=+.-..+.++......=+.++.+.|++|||++ ++.| .+..++|...
T Consensus 49 gli~Rl~-~Pk~t~lIF~SGKiv~TGakS~e~a~~a~~~i~~~L~~lG~~~~~~~~~~I~NIVas~~l~~~i~L~~la~~ 127 (198)
T 1mp9_A 49 GLIFRLE-SPKITSLIFKSGKMVVTGAKSTDELIKAVKRIIKTLKKYGMQLTGKPKIQIQNIVASANLHVIVNLDKAAFL 127 (198)
T ss_dssp SEEEEET-TTTEEEEECTTSEEEEECCSSHHHHHHHHHHHHHHHHHTTCCCSSCCEEEEEEEEEEEECSSEECHHHHHHH
T ss_pred ceEEEcC-CCceEEEEeCCCeEEEeccCCHHHHHHHHHHHHHHHHHcCCcccCcCceEEEEEEEEeeCCCccCHHHHHhh
Confidence 3447774 6889999999888876676666555555778888899999974 1111 1556666655
Q ss_pred hhcCCCcccccc-cccccccCCCCcccEEEEEEeccCCCCCCCCCCCcHHhHHHHHHHHHhcCCe
Q psy15857 353 IDEGPVAKSTVE-KDADYYRMDHKHRGLALIFNHEHFDSPHLKSRAGTGADFENLYTTLVNLGFV 416 (455)
Q Consensus 353 l~k~~~~~s~~~-~~~~~Y~m~~~~~g~~lIin~~~F~~~~l~~R~Gs~~D~e~L~~~F~~LgF~ 416 (455)
++ ...++++ -+--.|++. .++-.++||...+--=.+-+...-...=++.+...+.++|+.
T Consensus 128 ~~---~~~YePe~fPgliyR~~-~Pk~t~lIF~SGKiviTGaks~~~~~~A~~~i~~~L~~~~~~ 188 (198)
T 1mp9_A 128 LE---NNMYEPEQFPGLIYRMD-EPRVVLLIFSSGKMVITGAKREDEVHKAVKKIFDKLVELDCV 188 (198)
T ss_dssp SS---SEECCTTTCSSEEEEET-TTTEEEEECTTSEEEEEEESSHHHHHHHHHHHHHHHHHTTCE
T ss_pred cC---CcEECCccCCeEEEEeC-CCcEEEEEeCCCEEEEEecCCHHHHHHHHHHHHHHHHHhCCC
Confidence 43 2233333 223456666 455555555322110011122333333445566788888874
No 72
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}
Probab=23.96 E-value=1.4e+02 Score=28.91 Aligned_cols=54 Identities=9% Similarity=0.037 Sum_probs=43.7
Q ss_pred CceeEEEEEeCCCCCCCCCCCCCChHHhHHHHHHHHHhCCcEEEEec---CCCHHHHHHHHHHHHh
Q psy15857 22 KHRGLALIFNHEHFDSPHLKSRAGTGADFENLYTTLVNLGFVVKPYH---DPEFKVIQNAIDEAAE 84 (455)
Q Consensus 22 ~~~G~aLIInN~~F~~~~l~~R~Gs~~D~~~L~~~F~~LGF~V~~~~---nlt~~em~~~l~~~s~ 84 (455)
..+++|+|.- .++++|..-++.-.+.++++|+..+.+. +.|.+|+.+.|+++-.
T Consensus 33 ~~P~Lavilv---------g~dpaS~~Yv~~k~k~~~~~Gi~~~~~~lp~~~s~~ell~~I~~lN~ 89 (285)
T 3l07_A 33 ITPKLVAIIV---------GNDPASKTYVASKEKACAQVGIDSQVITLPEHTTESELLELIDQLNN 89 (285)
T ss_dssp CCCEEEEEEE---------SCCHHHHHHHHHHHHHHHHHTCEEEEEEECTTCCHHHHHHHHHHHHT
T ss_pred CCceEEEEEE---------CCCHHHHHHHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHHhC
Confidence 3578998864 3445677888899999999999977664 8899999999988875
No 73
>2fi0_A Conserved domain protein; structural genomics,streptococcus pneumoniae, PSI, protein S initiative; 2.10A {Streptococcus pneumoniae} SCOP: a.248.1.1
Probab=23.76 E-value=36 Score=26.31 Aligned_cols=18 Identities=22% Similarity=0.351 Sum_probs=16.1
Q ss_pred HhHHHHHHHHhhcCCEEE
Q psy15857 322 ADFENLYTTLVNLGFVVK 339 (455)
Q Consensus 322 ~D~~~l~~~~~~Lgf~V~ 339 (455)
+|.+.|.+.|..+||+|.
T Consensus 61 id~d~l~~~L~~~g~~~~ 78 (81)
T 2fi0_A 61 TPMDKIVRTLEANGYEVI 78 (81)
T ss_dssp CCHHHHHHHHHHTTCEEE
T ss_pred CCHHHHHHHHHHcCCEee
Confidence 578899999999999986
No 74
>2lci_A Protein OR36; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, de novo protein; NMR {Artificial gene}
Probab=22.27 E-value=1.8e+02 Score=23.57 Aligned_cols=46 Identities=13% Similarity=0.203 Sum_probs=28.2
Q ss_pred eeEEEEEeCCCCCCCCCCCCCChHHhHHHHHHHHHhCCcEEEEe-cCCCHHHHHHHHHHH
Q psy15857 24 RGLALIFNHEHFDSPHLKSRAGTGADFENLYTTLVNLGFVVKPY-HDPEFKVIQNAIDEA 82 (455)
Q Consensus 24 ~G~aLIInN~~F~~~~l~~R~Gs~~D~~~L~~~F~~LGF~V~~~-~nlt~~em~~~l~~~ 82 (455)
--..|||+|.. .=.+.|-++..+|||.|... +|....|+.+.-+++
T Consensus 51 fekiliisndk-------------qllkemlelisklgykvflllqdqdeneleefkrki 97 (134)
T 2lci_A 51 FEKILIISNDK-------------QLLKEMLELISKLGYKVFLLLQDQDENELEEFKRKI 97 (134)
T ss_dssp CCCEEEEESCH-------------HHHHHHHHHHHHHTCCEEEEEECSCHHHHHHHHHHH
T ss_pred cceEEEEcCcH-------------HHHHHHHHHHHHhCceeEEEeecCchhHHHHHHHHH
Confidence 34478888742 23455666777888888644 577766665544433
No 75
>2i4i_A ATP-dependent RNA helicase DDX3X; DEAD, structural genomics, SGC, structural GE consortium, hydrolase; HET: AMP; 2.20A {Homo sapiens}
Probab=21.69 E-value=2e+02 Score=27.67 Aligned_cols=50 Identities=18% Similarity=0.239 Sum_probs=40.9
Q ss_pred ceeEEEEEeCCCCCCCCCCCCCChHHhHHHHHHHHHhCCcEEEEe-cCCCHHHHHHHHHHHHhh
Q psy15857 23 HRGLALIFNHEHFDSPHLKSRAGTGADFENLYTTLVNLGFVVKPY-HDPEFKVIQNAIDEAAEQ 85 (455)
Q Consensus 23 ~~G~aLIInN~~F~~~~l~~R~Gs~~D~~~L~~~F~~LGF~V~~~-~nlt~~em~~~l~~~s~~ 85 (455)
+.+.+|||.| +..+++.+.+.|++.|+.+..+ .+++.++-.+.+++|...
T Consensus 275 ~~~~~lVf~~-------------~~~~~~~l~~~L~~~~~~~~~~h~~~~~~~r~~~~~~f~~g 325 (417)
T 2i4i_A 275 KDSLTLVFVE-------------TKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSG 325 (417)
T ss_dssp TTCEEEEECS-------------SHHHHHHHHHHHHHTTCCEEEECTTSCHHHHHHHHHHHHHT
T ss_pred CCCeEEEEEC-------------CHHHHHHHHHHHHHCCCCeeEecCCCCHHHHHHHHHHHHcC
Confidence 4566888765 5688999999999999998765 479999999999999754
No 76
>3exc_X Uncharacterized protein; ferredoxin fold, double split beta-alpha-beta fold, dimer, C aspartate, RNA'ASE, hydrolase; 2.25A {Sulfolobus solfataricus} SCOP: d.58.58.0
Probab=21.40 E-value=2.9e+02 Score=21.68 Aligned_cols=63 Identities=14% Similarity=0.124 Sum_probs=40.0
Q ss_pred HhHHHHHHHHHhCCc-EE----EEecCCCHHHHHHHHHHHHhhcCCCCceEEEEEecCCC--CceeeeeCC
Q psy15857 48 ADFENLYTTLVNLGF-VV----KPYHDPEFKVIQNAIDEAAEQDYTDADCFVMAVLTHGE--DGILHAKDV 111 (455)
Q Consensus 48 ~D~~~L~~~F~~LGF-~V----~~~~nlt~~em~~~l~~~s~~d~~~~d~~vvvilSHG~--~g~I~g~D~ 111 (455)
+-..++.+++++.|| -| ... .+|..++.+...++.+.-....|++.++-++-.. .-.++|.++
T Consensus 16 krr~kv~k~l~~yGl~rvQ~SVFe~-~lt~~~~~~L~~~L~~~id~~~Dsv~iy~l~~~~~~~~~~iG~~~ 85 (91)
T 3exc_X 16 SKRNKLANNLKKLGLERIQRSAFEG-DMDSQRMKDLVRVVKLIVDTNTDIVHIIPLGIRDWERRIVIGREG 85 (91)
T ss_dssp HHHHHHHHHHHHTTCEEEETTEEEE-ECC--CHHHHHHHHHHHSCTTTCEEEEEEECHHHHHTCCCCCC--
T ss_pred hHHHHHHHHHHHhCCccceeeEEEE-ECCHHHHHHHHHHHHHhcCCCCCEEEEEEeCchhhceEEEECCCC
Confidence 345889999999996 33 333 6899988888888876422456888888876543 234555544
No 77
>2db3_A ATP-dependent RNA helicase VASA; DEAD-BOX, protein-RNA complex, ATPase, riken structural genomics/proteomics initiative, RSGI; HET: ANP; 2.20A {Drosophila melanogaster}
Probab=20.41 E-value=4.3e+02 Score=26.00 Aligned_cols=40 Identities=15% Similarity=0.050 Sum_probs=34.2
Q ss_pred hHHhHHHHHHHHHhCCcEEEEe-cCCCHHHHHHHHHHHHhh
Q psy15857 46 TGADFENLYTTLVNLGFVVKPY-HDPEFKVIQNAIDEAAEQ 85 (455)
Q Consensus 46 s~~D~~~L~~~F~~LGF~V~~~-~nlt~~em~~~l~~~s~~ 85 (455)
+...++.|.+.|++.||.+..+ .+++.++-.+.+++|...
T Consensus 309 t~~~a~~l~~~L~~~~~~~~~lhg~~~~~~R~~~l~~F~~g 349 (434)
T 2db3_A 309 TKRGADFLASFLSEKEFPTTSIHGDRLQSQREQALRDFKNG 349 (434)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEESTTSCHHHHHHHHHHHHTS
T ss_pred CcHHHHHHHHHHHhCCCCEEEEeCCCCHHHHHHHHHHHHcC
Confidence 5688999999999999997655 589999999999999753
Done!