Your job contains 1 sequence.
>psy15859
MASSRLEKIGTIFTRVTGLLRAGAMNVNEKPIWYDVYRAFPPKVEPLYSRPIADVPIKEI
IYPEDSIRAKLHKALGKKMPGYNLLEKNRPTVSQKIILQTLQHQKEDPSLSEDEALAKAI
ETYNSEIRQVKADDIPEDFNKPKFGYYKTKPSLANEFKRAVETKVDMFDRGSCNC
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy15859
(175 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0260407 - symbol:mRpS23 "mitochondrial Ribosomal p... 335 2.3e-30 1
ZFIN|ZDB-GENE-040801-134 - symbol:mrps23 "mitochondrial r... 248 3.9e-21 1
UNIPROTKB|E2RKE5 - symbol:MRPS23 "Uncharacterized protein... 225 1.1e-18 1
UNIPROTKB|F1MZW1 - symbol:MRPS23 "28S ribosomal protein S... 221 2.8e-18 1
UNIPROTKB|Q2NL27 - symbol:MRPS23 "28S ribosomal protein S... 220 3.6e-18 1
UNIPROTKB|J3QLR8 - symbol:MRPS23 "28S ribosomal protein S... 213 2.0e-17 1
UNIPROTKB|Q9Y3D9 - symbol:MRPS23 "28S ribosomal protein S... 213 2.0e-17 1
MGI|MGI:1928138 - symbol:Mrps23 "mitochondrial ribosomal ... 209 5.3e-17 1
UNIPROTKB|F1RSB6 - symbol:LOC100737430 "Uncharacterized p... 207 8.6e-17 1
RGD|1306963 - symbol:Mrps23 "mitochondrial ribosomal prot... 206 1.1e-16 1
WB|WBGene00014224 - symbol:mrps-23 species:6239 "Caenorha... 202 2.9e-16 1
UNIPROTKB|E1C2E9 - symbol:MRPS23 "Uncharacterized protein... 189 6.9e-15 1
>FB|FBgn0260407 [details] [associations]
symbol:mRpS23 "mitochondrial Ribosomal protein S23"
species:7227 "Drosophila melanogaster" [GO:0005761 "mitochondrial
ribosome" evidence=ISS] [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR019520 InterPro:IPR023611 Pfam:PF10484 EMBL:AE014134
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 CTD:51649
PANTHER:PTHR15925 GeneTree:ENSGT00390000009030 RefSeq:NP_723847.1
PRIDE:Q8IP62 EnsemblMetazoa:FBtr0080566 GeneID:318977
KEGG:dme:Dmel_CG31842 UCSC:CG31842-RA FlyBase:FBgn0260407
InParanoid:Q8IP62 OMA:GAMKTED OrthoDB:EOG41NS38 PhylomeDB:Q8IP62
ChiTaRS:MRPS23 GenomeRNAi:318977 NextBio:846818 ArrayExpress:Q8IP62
Bgee:Q8IP62 Uniprot:Q8IP62
Length = 189
Score = 335 (123.0 bits), Expect = 2.3e-30, P = 2.3e-30
Identities = 71/161 (44%), Positives = 97/161 (60%)
Query: 1 MASSRLEKIGTIFTRVTGLLRAGAMNVNEKPIWYDVYRAFPPKVEPLYSRPIADVPIKEI 60
MA SRLEKIGTIFTRV GLLR GAM +KPIWYDVY AFPPK+EP + RP ++P+++I
Sbjct: 1 MAQSRLEKIGTIFTRVQGLLRGGAMKTEDKPIWYDVYAAFPPKLEPRFDRPAPEIPVRQI 60
Query: 61 IYPEDSIRAKLHKALGKKMPGYNLLEKNRPTVSQKIILQTLQHQKEDPSLSEDEALAKAI 120
Y ED +RAKLHK K +L + R T SQ+ + Q Q K +L E A+
Sbjct: 61 FYAEDVVRAKLHKE-NKPQETISLFDHRRSTQSQQFV-QIYQDLKGQGALDEQRIYETAL 118
Query: 121 ETYNSEIRQVKADDIPEDFNKPKFGYYKTKPSLANEFKRAV 161
+ + +Q + + PE+ + ++K L ++FK AV
Sbjct: 119 DLLAEQRQQARLETTPEECLPEQDS--ESKSQLLSDFKEAV 157
>ZFIN|ZDB-GENE-040801-134 [details] [associations]
symbol:mrps23 "mitochondrial ribosomal protein S23"
species:7955 "Danio rerio" [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR019520
InterPro:IPR023611 Pfam:PF10484 ZFIN:ZDB-GENE-040801-134
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 PANTHER:PTHR15925
GeneTree:ENSGT00390000009030 EMBL:BX649531 IPI:IPI00851678
PRIDE:E9QDB6 Ensembl:ENSDART00000135632 ArrayExpress:E9QDB6
Bgee:E9QDB6 Uniprot:E9QDB6
Length = 188
Score = 248 (92.4 bits), Expect = 3.9e-21, P = 3.9e-21
Identities = 59/129 (45%), Positives = 75/129 (58%)
Query: 1 MASSRLEKIGTIFTRVTGLLRAGAMNVNEKPIWYDVYRAFPPKVEPLYSRP------IAD 54
MA SRLEK GT+FTRV LLRAG + EKPIWYDVY AFPPK EPLY +P AD
Sbjct: 1 MAGSRLEKFGTVFTRVRDLLRAGVLKPEEKPIWYDVYAAFPPKKEPLYQKPRRPRVPAAD 60
Query: 55 VPIKEIIYPEDSIRAKLHKALGKKMPGYNLLEKNRPTVSQKIILQTLQ-HQKED--PSLS 111
P+ ++ Y ED IRAK + G + L N + QK +++ + + D P L
Sbjct: 61 -PVPQLFYKEDEIRAKFFEVYGNGPKAFEPLMPNFISSCQKFVMKYSELESRGDIKPELL 119
Query: 112 EDEALAKAI 120
+E AKA+
Sbjct: 120 FEET-AKAL 127
>UNIPROTKB|E2RKE5 [details] [associations]
symbol:MRPS23 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045111 "intermediate filament cytoskeleton"
evidence=IEA] [GO:0031965 "nuclear membrane" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA]
InterPro:IPR019520 InterPro:IPR023611 Pfam:PF10484 GO:GO:0005739
GO:GO:0006412 GO:GO:0031965 GO:GO:0005840 GO:GO:0045111
GO:GO:0003735 CTD:51649 PANTHER:PTHR15925 OMA:FSRTRNL
GeneTree:ENSGT00390000009030 EMBL:AAEX03006562 RefSeq:XP_852355.2
Ensembl:ENSCAFT00000027607 GeneID:609917 KEGG:cfa:609917
Uniprot:E2RKE5
Length = 190
Score = 225 (84.3 bits), Expect = 1.1e-18, P = 1.1e-18
Identities = 47/110 (42%), Positives = 68/110 (61%)
Query: 1 MASSRLEKIGTIFTRVTGLLRAGAMNVNEKPIWYDVYRAFPPKVEPLYSRPI-----ADV 55
MA SRLE +G+IF+R L+RAG + EKP+W+DVY AFPP EP++ RP A
Sbjct: 1 MARSRLETVGSIFSRTRDLIRAGVLK--EKPLWFDVYDAFPPLREPVFRRPRLRYGKAKA 58
Query: 56 PIKEIIYPEDSIRAKLHKALGKKMPGYNLLEKNRPTVSQKIILQTLQHQK 105
I++I+YPED IRAK + A G ++L N + Q+ + + ++ QK
Sbjct: 59 AIQDILYPEDRIRAKFYSAYGSGQKAFDLFNPNFKSTCQQFVEKYIELQK 108
>UNIPROTKB|F1MZW1 [details] [associations]
symbol:MRPS23 "28S ribosomal protein S23, mitochondrial"
species:9913 "Bos taurus" [GO:0045111 "intermediate filament
cytoskeleton" evidence=IEA] [GO:0031965 "nuclear membrane"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
InterPro:IPR019520 InterPro:IPR023611 Pfam:PF10484 GO:GO:0005739
GO:GO:0006412 GO:GO:0031965 GO:GO:0005840 GO:GO:0045111
GO:GO:0003735 IPI:IPI00696803 UniGene:Bt.27840 PANTHER:PTHR15925
OMA:FSRTRNL GeneTree:ENSGT00390000009030 EMBL:DAAA02048295
Ensembl:ENSBTAT00000016409 Uniprot:F1MZW1
Length = 190
Score = 221 (82.9 bits), Expect = 2.8e-18, P = 2.8e-18
Identities = 47/110 (42%), Positives = 66/110 (60%)
Query: 1 MASSRLEKIGTIFTRVTGLLRAGAMNVNEKPIWYDVYRAFPPKVEPLYSRPI-----ADV 55
MA SRLE +G+IFTR L+RAG + EKP+W+DVY AFPP EP++ RP A
Sbjct: 1 MAGSRLETVGSIFTRTRDLIRAGVLK--EKPLWFDVYNAFPPLREPVFRRPRLRYGKAKS 58
Query: 56 PIKEIIYPEDSIRAKLHKALGKKMPGYNLLEKNRPTVSQKIILQTLQHQK 105
P ++I Y ED IRAK + A G ++L N + Q+ + + ++ QK
Sbjct: 59 PTQDIFYHEDQIRAKFYAAYGSGPKAFDLFNPNFKSTCQRFVEKYIELQK 108
>UNIPROTKB|Q2NL27 [details] [associations]
symbol:MRPS23 "28S ribosomal protein S23, mitochondrial"
species:9913 "Bos taurus" [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] InterPro:IPR019520 InterPro:IPR023611 Pfam:PF10484
GO:GO:0005739 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
EMBL:BC111164 IPI:IPI00696803 RefSeq:NP_001039657.1
UniGene:Bt.27840 PRIDE:Q2NL27 GeneID:515228 KEGG:bta:515228
CTD:51649 eggNOG:NOG81280 HOGENOM:HOG000059557 HOVERGEN:HBG044512
InParanoid:Q2NL27 OrthoDB:EOG4FTW1N NextBio:20871725
PANTHER:PTHR15925 Uniprot:Q2NL27
Length = 190
Score = 220 (82.5 bits), Expect = 3.6e-18, P = 3.6e-18
Identities = 47/110 (42%), Positives = 66/110 (60%)
Query: 1 MASSRLEKIGTIFTRVTGLLRAGAMNVNEKPIWYDVYRAFPPKVEPLYSRPI-----ADV 55
MA SRLE +G+IFTR L+RAG + EKP+W+DVY AFPP EP++ RP A
Sbjct: 1 MAGSRLETVGSIFTRTRDLIRAGVLK--EKPLWFDVYNAFPPLREPVFRRPRLRYGKAKS 58
Query: 56 PIKEIIYPEDSIRAKLHKALGKKMPGYNLLEKNRPTVSQKIILQTLQHQK 105
P ++I Y ED IRAK + A G ++L N + Q+ + + ++ QK
Sbjct: 59 PTQDIYYHEDQIRAKFYAAYGSGPKAFDLFNPNFKSTCQRFVEKYIELQK 108
>UNIPROTKB|J3QLR8 [details] [associations]
symbol:MRPS23 "28S ribosomal protein S23, mitochondrial"
species:9606 "Homo sapiens" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR019520
InterPro:IPR023611 Pfam:PF10484 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 PANTHER:PTHR15925 HGNC:HGNC:14509 EMBL:AC015845
Ensembl:ENST00000578444 Uniprot:J3QLR8
Length = 152
Score = 213 (80.0 bits), Expect = 2.0e-17, P = 2.0e-17
Identities = 46/110 (41%), Positives = 65/110 (59%)
Query: 1 MASSRLEKIGTIFTRVTGLLRAGAMNVNEKPIWYDVYRAFPPKVEPLYSRPI-----ADV 55
MA SRLE +G+IF+R L+RAG + EKP+W+DVY AFPP EP++ RP A
Sbjct: 1 MAGSRLETVGSIFSRTRDLVRAGVLK--EKPLWFDVYDAFPPLREPVFQRPRVRYGKAKA 58
Query: 56 PIKEIIYPEDSIRAKLHKALGKKMPGYNLLEKNRPTVSQKIILQTLQHQK 105
PI++I Y ED IRAK + G ++L N + Q+ + + + QK
Sbjct: 59 PIQDIWYHEDRIRAKFYSVYGSGQRAFDLFNPNFKSTCQRFVEKYTELQK 108
>UNIPROTKB|Q9Y3D9 [details] [associations]
symbol:MRPS23 "28S ribosomal protein S23, mitochondrial"
species:9606 "Homo sapiens" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0031965 "nuclear membrane" evidence=IDA]
[GO:0045111 "intermediate filament cytoskeleton" evidence=IDA]
InterPro:IPR019520 InterPro:IPR023611 Pfam:PF10484 UniProt:Q9Y3D9
GO:GO:0005739 GO:GO:0006412 GO:GO:0031965 GO:GO:0005840
GO:GO:0045111 GO:GO:0003735 EMBL:CH471109 CTD:51649 eggNOG:NOG81280
HOGENOM:HOG000059557 HOVERGEN:HBG044512 OrthoDB:EOG4FTW1N
PANTHER:PTHR15925 EMBL:AF151896 EMBL:AF161447 EMBL:AK312729
EMBL:BC000242 EMBL:AB061206 IPI:IPI00032881 RefSeq:NP_057154.2
UniGene:Hs.5836 ProteinModelPortal:Q9Y3D9 IntAct:Q9Y3D9
STRING:Q9Y3D9 PhosphoSite:Q9Y3D9 DMDM:31077184 PaxDb:Q9Y3D9
PeptideAtlas:Q9Y3D9 PRIDE:Q9Y3D9 Ensembl:ENST00000313608
GeneID:51649 KEGG:hsa:51649 UCSC:uc002ivc.3 GeneCards:GC17M055916
HGNC:HGNC:14509 HPA:HPA023453 MIM:611985 neXtProt:NX_Q9Y3D9
PharmGKB:PA31011 InParanoid:Q9Y3D9 OMA:FSRTRNL PhylomeDB:Q9Y3D9
GenomeRNAi:51649 NextBio:55600 Bgee:Q9Y3D9 CleanEx:HS_MRPS23
Genevestigator:Q9Y3D9 GermOnline:ENSG00000181610
Length = 190
Score = 213 (80.0 bits), Expect = 2.0e-17, P = 2.0e-17
Identities = 46/110 (41%), Positives = 65/110 (59%)
Query: 1 MASSRLEKIGTIFTRVTGLLRAGAMNVNEKPIWYDVYRAFPPKVEPLYSRPI-----ADV 55
MA SRLE +G+IF+R L+RAG + EKP+W+DVY AFPP EP++ RP A
Sbjct: 1 MAGSRLETVGSIFSRTRDLVRAGVLK--EKPLWFDVYDAFPPLREPVFQRPRVRYGKAKA 58
Query: 56 PIKEIIYPEDSIRAKLHKALGKKMPGYNLLEKNRPTVSQKIILQTLQHQK 105
PI++I Y ED IRAK + G ++L N + Q+ + + + QK
Sbjct: 59 PIQDIWYHEDRIRAKFYSVYGSGQRAFDLFNPNFKSTCQRFVEKYTELQK 108
>MGI|MGI:1928138 [details] [associations]
symbol:Mrps23 "mitochondrial ribosomal protein S23"
species:10090 "Mus musculus" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0005763 "mitochondrial small ribosomal subunit" evidence=ISS]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR019520 InterPro:IPR023611 Pfam:PF10484 MGI:MGI:1928138
GO:GO:0006412 GO:GO:0031965 GO:GO:0045111 GO:GO:0003735
GO:GO:0005763 CTD:51649 eggNOG:NOG81280 HOGENOM:HOG000059557
HOVERGEN:HBG044512 OrthoDB:EOG4FTW1N PANTHER:PTHR15925 OMA:FSRTRNL
EMBL:AK014375 EMBL:BC019980 IPI:IPI00284934 RefSeq:NP_077136.2
UniGene:Mm.168680 STRING:Q8VE22 PhosphoSite:Q8VE22 PaxDb:Q8VE22
PRIDE:Q8VE22 Ensembl:ENSMUST00000024486 GeneID:64656 KEGG:mmu:64656
GeneTree:ENSGT00390000009030 NextBio:320139 Bgee:Q8VE22
CleanEx:MM_MRPS23 Genevestigator:Q8VE22
GermOnline:ENSMUSG00000023723 Uniprot:Q8VE22
Length = 177
Score = 209 (78.6 bits), Expect = 5.3e-17, P = 5.3e-17
Identities = 42/102 (41%), Positives = 60/102 (58%)
Query: 1 MASSRLEKIGTIFTRVTGLLRAGAMNVNEKPIWYDVYRAFPPKVEPLYSRPI-----ADV 55
MA SRLE +G++F+R L+RAG + EKP+WYD+Y+AFPP EP++ RP A
Sbjct: 1 MAGSRLETVGSVFSRTRDLMRAGVLK--EKPLWYDIYKAFPPLREPVFRRPRLRYGKAKA 58
Query: 56 PIKEIIYPEDSIRAKLHKALGKKMPGYNLLEKNRPTVSQKII 97
I++I Y ED IRAK G ++L N + Q+ +
Sbjct: 59 DIQDIFYQEDQIRAKFFATYGSGQKAFDLFNPNFKSTCQRFV 100
>UNIPROTKB|F1RSB6 [details] [associations]
symbol:LOC100737430 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR019520 InterPro:IPR023611
Pfam:PF10484 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 CTD:51649
PANTHER:PTHR15925 OMA:FSRTRNL GeneTree:ENSGT00390000009030
EMBL:CU915688 EMBL:FP102570 RefSeq:NP_001230742.1
RefSeq:XP_003483082.1 UniGene:Ssc.20659 UniGene:Ssc.59171
Ensembl:ENSSSCT00000019183 Ensembl:ENSSSCT00000019187
GeneID:100511221 GeneID:100737430 KEGG:ssc:100511221
KEGG:ssc:100737430 Uniprot:F1RSB6
Length = 189
Score = 207 (77.9 bits), Expect = 8.6e-17, P = 8.6e-17
Identities = 43/110 (39%), Positives = 65/110 (59%)
Query: 1 MASSRLEKIGTIFTRVTGLLRAGAMNVNEKPIWYDVYRAFPPKVEPLYSRPI-----ADV 55
MA SRLE +G+IF+R L+RAG + EKP+W D+Y AFPP EP++ RP A
Sbjct: 1 MAGSRLETVGSIFSRTRDLIRAGVLK--EKPLWLDIYNAFPPLREPVFRRPRLRYGKAKA 58
Query: 56 PIKEIIYPEDSIRAKLHKALGKKMPGYNLLEKNRPTVSQKIILQTLQHQK 105
+++I Y ED IRAK + A G ++L N + Q+ + + ++ Q+
Sbjct: 59 AVQDIFYHEDRIRAKFYSAYGSGPKAFDLFNPNFKSTCQRFVEKYIELQR 108
>RGD|1306963 [details] [associations]
symbol:Mrps23 "mitochondrial ribosomal protein S23"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA;ISO] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0031965 "nuclear membrane"
evidence=IEA;ISO] [GO:0045111 "intermediate filament cytoskeleton"
evidence=IEA;ISO] InterPro:IPR019520 InterPro:IPR023611
Pfam:PF10484 RGD:1306963 GO:GO:0005739 GO:GO:0006412 GO:GO:0031965
GO:GO:0005840 GO:GO:0045111 GO:GO:0003735 EMBL:CH473948 CTD:51649
OrthoDB:EOG4FTW1N PANTHER:PTHR15925 OMA:FSRTRNL
GeneTree:ENSGT00390000009030 IPI:IPI00372672 RefSeq:NP_001101759.1
UniGene:Rn.198893 Ensembl:ENSRNOT00000013771 GeneID:360594
KEGG:rno:360594 NextBio:673379 Uniprot:D3ZIN7
Length = 177
Score = 206 (77.6 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 48/127 (37%), Positives = 69/127 (54%)
Query: 1 MASSRLEKIGTIFTRVTGLLRAGAMNVNEKPIWYDVYRAFPPKVEPLYSRPI-----ADV 55
MA SRLE +G++F+R L+RAG + EKP+WYD+Y+AFPP EP++ RP A
Sbjct: 1 MAGSRLETVGSVFSRTRDLMRAGVLK--EKPLWYDIYKAFPPLKEPVFRRPRLRYGKAKA 58
Query: 56 PIKEIIYPEDSIRAKLHKALGKKMPGYNLLEKNRPTVSQKIILQTLQHQKEDPSLSEDEA 115
I++I Y ED IRAK G +L N + Q+ + + + Q SL E +
Sbjct: 59 DIQDIFYREDQIRAKFFSTYGSGHKAIDLFNPNFKSTCQRFVEKYTELQ----SLGETDE 114
Query: 116 LAKAIET 122
+ET
Sbjct: 115 EKLFVET 121
>WB|WBGene00014224 [details] [associations]
symbol:mrps-23 species:6239 "Caenorhabditis elegans"
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0018991
"oviposition" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0006898 "receptor-mediated
endocytosis" evidence=IMP] InterPro:IPR019520 InterPro:IPR023611
Pfam:PF10484 GO:GO:0009792 GO:GO:0006898 GO:GO:0040007
GO:GO:0018991 GO:GO:0040010 GO:GO:0002119 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 EMBL:Z22176 eggNOG:NOG81280
PANTHER:PTHR15925 OMA:FSRTRNL GeneTree:ENSGT00390000009030
PIR:G88557 RefSeq:NP_499099.1 STRING:P34748 PaxDb:P34748
EnsemblMetazoa:ZK1098.7 GeneID:191523 KEGG:cel:CELE_ZK1098.7
UCSC:ZK1098.7 CTD:191523 WormBase:ZK1098.7 HOGENOM:HOG000019152
InParanoid:P34748 NextBio:949458 Uniprot:P34748
Length = 133
Score = 202 (76.2 bits), Expect = 2.9e-16, P = 2.9e-16
Identities = 46/118 (38%), Positives = 73/118 (61%)
Query: 1 MAS--SRLEKIGTIFTRVTGLLRAGAMNVNEKPIWYDVYRAFPPKVEPLYSRPIA--DVP 56
MAS +R E+ G IF+RVTGL+RAG +N ++P+WYDVY + PP P ++ +A D P
Sbjct: 1 MASFITRAERSGNIFSRVTGLIRAGQLNWADRPLWYDVYVSSPPLTPPDWNVKLAKYDEP 60
Query: 57 IKEIIYPEDSIRAKLHKALGKKMPGYNLLEKNRPTVSQKIILQTLQHQKEDPSLSEDE 114
I+ I Y ED +RAK +K + G + + +R +VSQ+ I + + E+ ++D+
Sbjct: 61 IRSIFYEEDVLRAKFYKTY-RSTAGIQV-DSSRTSVSQQFINEYKLVKSENAEATDDQ 116
>UNIPROTKB|E1C2E9 [details] [associations]
symbol:MRPS23 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0031965 "nuclear membrane" evidence=IEA]
[GO:0045111 "intermediate filament cytoskeleton" evidence=IEA]
InterPro:IPR019520 InterPro:IPR023611 Pfam:PF10484 GO:GO:0005739
GO:GO:0006412 GO:GO:0031965 GO:GO:0005840 GO:GO:0045111
GO:GO:0003735 CTD:51649 PANTHER:PTHR15925 OMA:FSRTRNL
GeneTree:ENSGT00390000009030 EMBL:AADN02025720 IPI:IPI00598261
RefSeq:XP_003642463.1 UniGene:Gga.5212 Ensembl:ENSGALT00000008922
GeneID:417666 KEGG:gga:417666 NextBio:20820933 Uniprot:E1C2E9
Length = 189
Score = 189 (71.6 bits), Expect = 6.9e-15, P = 6.9e-15
Identities = 47/130 (36%), Positives = 70/130 (53%)
Query: 1 MASSRLEKIGTIFTRVTGLLRAGAMNVNEKPIWYDVYRAFPPKVEPLYS--RP-----IA 53
MA SR++K G++F+R LLR G + +KP+W+DVY FPP EPLY RP
Sbjct: 1 MAGSRMQKTGSVFSRTRNLLRIGVI---QKPLWFDVYATFPPLREPLYRVPRPRYGKVTD 57
Query: 54 DVPIKEIIYPEDSIRAKLHKALGKKMPGYNLLEKNRPTVSQKIILQTLQHQKEDPSLSED 113
DVP I Y ED +RAK ++ G ++L + N + Q+ + + KE+ + E+
Sbjct: 58 DVP--PIFYREDEVRAKFYRIYGSGPKPFDLSQPNYKSTCQRFV-EKYNELKEEGKIEEE 114
Query: 114 ---EALAKAI 120
E KA+
Sbjct: 115 NLFEETGKAL 124
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.134 0.387 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 175 175 0.00078 109 3 11 22 0.45 32
31 0.49 34
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 12
No. of states in DFA: 583 (62 KB)
Total size of DFA: 145 KB (2089 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 20.60u 0.14s 20.74t Elapsed: 00:00:02
Total cpu time: 20.60u 0.14s 20.74t Elapsed: 00:00:02
Start: Thu Aug 15 14:52:35 2013 End: Thu Aug 15 14:52:37 2013