Query psy1586
Match_columns 431
No_of_seqs 162 out of 1132
Neff 9.0
Searched_HMMs 29240
Date Fri Aug 16 23:12:30 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy1586.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/1586hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2p3r_A Glycerol kinase; glycer 100.0 6.6E-86 2.2E-90 675.9 40.7 418 1-430 13-434 (510)
2 3h3n_X Glycerol kinase; ATP-bi 100.0 2.9E-85 9.9E-90 670.9 42.2 418 1-430 15-436 (506)
3 3hz6_A Xylulokinase; xylulose, 100.0 9.3E-86 3.2E-90 674.9 36.9 406 1-429 15-435 (511)
4 3ezw_A Glycerol kinase; glycer 100.0 3.7E-85 1.3E-89 673.1 41.1 420 1-430 14-435 (526)
5 3ll3_A Gluconate kinase; xylul 100.0 4.1E-85 1.4E-89 669.1 40.9 405 1-430 14-426 (504)
6 4e1j_A Glycerol kinase; struct 100.0 3E-85 1E-89 672.1 40.0 419 1-430 36-458 (520)
7 3ifr_A Carbohydrate kinase, FG 100.0 1.1E-85 3.7E-90 674.0 36.4 407 1-430 17-433 (508)
8 3g25_A Glycerol kinase; IDP007 100.0 1E-84 3.5E-89 666.5 42.1 418 1-430 16-437 (501)
9 2dpn_A Glycerol kinase; thermu 100.0 7.6E-82 2.6E-86 644.7 42.5 415 1-430 12-431 (495)
10 2w40_A Glycerol kinase, putati 100.0 1.2E-81 4.3E-86 644.3 42.3 421 1-430 14-440 (503)
11 2d4w_A Glycerol kinase; alpha 100.0 1.3E-81 4.4E-86 644.0 40.3 417 1-430 12-436 (504)
12 2zf5_O Glycerol kinase; hypert 100.0 2.3E-81 7.9E-86 641.4 39.0 411 1-430 13-426 (497)
13 2itm_A Xylulose kinase, xylulo 100.0 1.2E-80 4.1E-85 634.4 38.0 403 1-430 10-419 (484)
14 3jvp_A Ribulokinase; PSI-II, N 100.0 8.5E-81 2.9E-85 646.5 36.7 410 1-430 15-473 (572)
15 3i8b_A Xylulose kinase; strain 100.0 2.7E-80 9.3E-85 633.7 35.8 400 1-430 15-457 (515)
16 3l0q_A Xylulose kinase; xlylul 100.0 1E-78 3.5E-83 629.0 36.7 404 1-430 15-475 (554)
17 4bc3_A Xylulose kinase; transf 100.0 1.6E-77 5.5E-82 617.6 31.1 401 1-430 20-467 (538)
18 3h6e_A Carbohydrate kinase, FG 100.0 8E-75 2.7E-79 587.2 29.0 383 1-430 16-421 (482)
19 2uyt_A Rhamnulokinase; rhamnos 100.0 9.5E-71 3.3E-75 562.6 22.4 397 1-429 14-425 (489)
20 1hux_A Activator of (R)-2-hydr 99.2 2.1E-11 7.2E-16 114.0 6.4 115 299-430 126-241 (270)
21 2ews_A Pantothenate kinase; PA 97.1 0.0075 2.6E-07 56.0 14.0 130 297-430 134-273 (287)
22 2i7n_A Pantothenate kinase 1; 97.0 0.0035 1.2E-07 59.9 10.8 131 295-429 197-344 (360)
23 3h1q_A Ethanolamine utilizatio 96.4 0.016 5.5E-07 53.2 10.0 58 367-429 201-258 (272)
24 3qbx_A Anhydro-N-acetylmuramic 95.7 0.025 8.4E-07 54.0 7.9 61 365-429 255-316 (371)
25 2qm1_A Glucokinase; alpha-beta 95.5 0.043 1.5E-06 51.7 9.0 81 1-97 16-97 (326)
26 1z05_A Transcriptional regulat 95.5 0.073 2.5E-06 52.4 11.0 79 2-97 119-198 (429)
27 4ehu_A Activator of 2-hydroxyi 95.5 0.032 1.1E-06 51.4 7.7 108 301-430 126-239 (276)
28 1z6r_A MLC protein; transcript 95.3 0.041 1.4E-06 53.8 8.1 79 2-97 96-176 (406)
29 2hoe_A N-acetylglucosamine kin 95.0 0.071 2.4E-06 51.6 8.7 80 2-97 98-178 (380)
30 3cqy_A Anhydro-N-acetylmuramic 94.9 0.051 1.7E-06 51.9 7.4 58 366-428 263-321 (370)
31 4db3_A Glcnac kinase, N-acetyl 94.8 0.12 4E-06 48.9 9.6 75 2-97 35-109 (327)
32 2yhw_A Bifunctional UDP-N-acet 94.7 0.098 3.3E-06 49.7 8.9 79 1-97 40-121 (343)
33 3vgl_A Glucokinase; ROK family 94.7 0.057 2E-06 50.9 7.0 75 1-98 12-87 (321)
34 3r8e_A Hypothetical sugar kina 94.2 0.097 3.3E-06 49.3 7.4 77 2-98 30-108 (321)
35 3htv_A D-allose kinase, alloki 93.0 0.077 2.6E-06 49.8 4.4 76 2-97 18-94 (310)
36 3eno_A Putative O-sialoglycopr 92.6 0.3 1E-05 46.3 8.0 62 366-429 220-284 (334)
37 2ych_A Competence protein PILM 92.0 0.28 9.6E-06 47.1 7.2 62 367-428 275-337 (377)
38 2ivn_A O-sialoglycoprotein end 91.9 0.4 1.4E-05 45.3 7.9 114 303-429 153-279 (330)
39 2ch5_A NAGK protein; transfera 91.9 0.41 1.4E-05 45.3 8.1 65 1-75 16-81 (347)
40 1hux_A Activator of (R)-2-hydr 91.2 0.19 6.4E-06 46.1 4.7 58 1-76 13-70 (270)
41 4a2a_A Cell division protein F 90.9 0.28 9.7E-06 48.0 5.9 62 368-429 294-360 (419)
42 3ttc_A HYPF, transcriptional r 89.9 0.86 2.9E-05 47.0 8.5 120 301-429 502-632 (657)
43 4htl_A Beta-glucoside kinase; 89.3 1 3.4E-05 41.7 8.0 72 1-97 14-87 (297)
44 1zc6_A Probable N-acetylglucos 89.1 1.3 4.3E-05 41.1 8.6 62 1-73 21-84 (305)
45 4b9q_A Chaperone protein DNAK; 88.8 0.32 1.1E-05 50.1 4.6 59 368-427 305-363 (605)
46 3qfu_A 78 kDa glucose-regulate 88.6 0.51 1.7E-05 45.4 5.7 60 368-428 315-375 (394)
47 4gni_A Putative heat shock pro 87.6 0.47 1.6E-05 46.1 4.7 54 370-427 318-374 (409)
48 3i33_A Heat shock-related 70 k 87.6 0.54 1.8E-05 45.5 5.1 59 369-428 324-383 (404)
49 3vth_A Hydrogenase maturation 85.7 2 6.9E-05 45.1 8.4 63 365-429 663-728 (761)
50 1dkg_D Molecular chaperone DNA 85.3 0.74 2.5E-05 44.2 4.7 32 397-428 333-364 (383)
51 2e2o_A Hexokinase; acetate and 85.2 1.3 4.6E-05 40.7 6.3 46 1-53 12-57 (299)
52 3en9_A Glycoprotease, O-sialog 84.5 2.2 7.5E-05 43.1 8.0 113 302-429 157-283 (540)
53 3vov_A Glucokinase, hexokinase 80.5 2.4 8.3E-05 39.2 6.0 75 2-97 12-88 (302)
54 2iir_A Acetate kinase; transfe 80.3 8.4 0.00029 37.0 9.7 47 373-420 299-346 (403)
55 2ap1_A Putative regulator prot 80.0 6 0.00021 36.8 8.7 67 2-89 35-101 (327)
56 3epq_A Putative fructokinase; 79.8 4.8 0.00016 37.2 7.8 69 1-97 13-87 (302)
57 2v7y_A Chaperone protein DNAK; 79.7 1.6 5.3E-05 43.9 4.7 59 369-428 275-333 (509)
58 3d2f_A Heat shock protein homo 78.9 1.8 6.2E-05 45.0 5.0 59 369-428 307-365 (675)
59 2e1z_A Propionate kinase; TDCD 78.7 7.7 0.00026 37.4 8.9 47 373-420 307-354 (415)
60 1g99_A Acetate kinase; alpha/b 78.5 8.3 0.00029 37.1 9.0 48 372-420 298-346 (408)
61 1jce_A ROD shape-determining p 77.5 0.85 2.9E-05 43.0 1.9 30 399-428 279-308 (344)
62 4g9i_A Hydrogenase maturation 75.6 4.7 0.00016 42.5 7.0 62 365-428 675-739 (772)
63 2gup_A ROK family protein; sug 74.3 7.3 0.00025 35.5 7.3 60 2-88 15-74 (292)
64 3khy_A Propionate kinase; csgi 72.2 14 0.00049 35.1 8.7 47 372-419 289-336 (384)
65 1yuw_A Heat shock cognate 71 k 72.1 3.4 0.00012 41.9 4.8 57 370-427 304-361 (554)
66 3ven_A O-carbamoyltransferase 71.9 7.4 0.00025 39.4 7.1 59 367-427 279-338 (576)
67 2aa4_A Mannac kinase, putative 71.8 9.3 0.00032 34.7 7.4 73 2-97 12-86 (289)
68 4ijn_A Acetate kinase, acetoki 70.6 16 0.00054 35.0 8.7 48 371-419 298-346 (398)
69 3sk3_A Acetate kinase, acetoki 67.0 51 0.0017 31.7 11.5 96 307-419 266-362 (415)
70 2kho_A Heat shock protein 70; 65.5 1.6 5.6E-05 44.7 0.8 31 397-427 333-363 (605)
71 3r9p_A ACKA; ssgcid, seattle s 65.3 21 0.00071 34.1 8.2 48 371-419 289-337 (391)
72 1woq_A Inorganic polyphosphate 60.4 33 0.0011 30.5 8.6 78 2-97 23-104 (267)
73 3zyy_X Iron-sulfur cluster bin 56.5 22 0.00075 36.4 7.2 71 2-72 217-297 (631)
74 2zgy_A Plasmid segregation pro 51.9 15 0.0005 34.0 4.8 31 397-429 272-305 (320)
75 1xho_A Chorismate mutase; sout 51.6 23 0.00078 28.6 5.0 38 34-74 43-80 (148)
76 3mcp_A Glucokinase; structural 50.8 17 0.00059 34.5 5.1 75 2-97 20-98 (366)
77 3djc_A Type III pantothenate k 49.0 38 0.0013 30.5 6.9 44 365-409 184-229 (266)
78 2f9w_A Pantothenate kinase; CO 48.9 24 0.00081 32.0 5.5 44 365-409 201-244 (271)
79 1dbf_A Protein (chorismate mut 48.5 29 0.00099 27.3 5.1 38 34-74 14-51 (127)
80 2ivn_A O-sialoglycoprotein end 46.8 41 0.0014 31.2 7.0 62 3-71 13-75 (330)
81 2h3g_X Biosynthetic protein; p 45.3 24 0.00082 31.8 5.0 44 365-409 182-225 (268)
82 1zbs_A Hypothetical protein PG 44.8 28 0.00097 31.5 5.5 60 1-74 10-69 (291)
83 1ufy_A Chorismate mutase; shik 44.6 38 0.0013 26.4 5.2 37 35-74 14-51 (122)
84 3bex_A Type III pantothenate k 43.6 29 0.00099 30.9 5.2 43 365-409 180-222 (249)
85 4apw_A ALP12; actin-like prote 42.8 37 0.0013 31.5 6.0 57 369-429 251-308 (329)
86 3djc_A Type III pantothenate k 38.3 44 0.0015 30.1 5.5 30 237-266 109-140 (266)
87 2ov7_A 50S ribosomal protein L 36.5 96 0.0033 24.8 6.6 52 30-82 84-135 (137)
88 4am6_A Actin-like protein ARP8 35.9 13 0.00045 38.0 1.7 46 373-422 479-525 (655)
89 2yhx_A Hexokinase B; transfera 33.3 80 0.0027 30.8 6.9 67 1-74 71-140 (457)
90 2d0o_A DIOL dehydratase-reacti 32.4 58 0.002 32.7 5.5 68 357-427 503-579 (610)
91 4ehu_A Activator of 2-hydroxyi 31.0 94 0.0032 27.5 6.6 57 1-75 11-67 (276)
92 1nbw_A Glycerol dehydratase re 30.9 21 0.00072 35.8 2.2 69 357-427 505-581 (607)
93 1dw0_A Cytochrome C; asparagin 29.5 15 0.00052 28.3 0.7 33 130-166 78-111 (112)
94 4h0p_A Acetate kinase; askha ( 28.3 28 0.00095 33.7 2.5 50 371-420 321-376 (438)
95 1eik_A RNA polymerase subunit 27.5 40 0.0014 24.0 2.6 21 195-215 22-42 (77)
96 2h3g_X Biosynthetic protein; p 27.3 1.5E+02 0.0051 26.5 7.2 55 2-73 11-65 (268)
97 2gvs_A Chemosensory protein CS 23.4 50 0.0017 25.3 2.7 47 98-148 37-87 (109)
98 2q2r_A Glucokinase 1, putative 23.3 57 0.0019 30.7 3.7 72 2-96 40-115 (373)
99 3eno_A Putative O-sialoglycopr 22.9 90 0.0031 28.9 4.9 62 4-72 19-81 (334)
100 1mzp_A 50S ribosomal protein L 21.9 84 0.0029 27.2 4.2 47 31-81 170-216 (217)
101 2e2o_A Hexokinase; acetate and 21.8 1.3E+02 0.0046 26.8 5.9 56 371-428 215-271 (299)
102 1saz_A Probable butyrate kinas 21.7 1.7E+02 0.0058 27.5 6.7 49 372-420 270-319 (381)
103 2ftc_A Mitochondrial ribosomal 21.4 1.3E+02 0.0043 25.5 5.1 51 30-82 135-185 (189)
104 2fsj_A Hypothetical protein TA 20.6 63 0.0021 30.1 3.4 48 373-423 272-320 (346)
105 4h0o_A Acetate kinase; askha ( 20.2 1.1E+02 0.0037 29.3 4.8 49 370-419 300-349 (404)
No 1
>2p3r_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics,; 2.00A {Escherichia coli} PDB: 3ezw_A 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=100.00 E-value=6.6e-86 Score=675.88 Aligned_cols=418 Identities=45% Similarity=0.808 Sum_probs=381.1
Q ss_pred CCcEEEEEeCCCCeEEEEEEeecceecCCCCceeeCHHHHHHHHHHHHHHHHHhhhhcCCCCCCeeEEEEecccceEEEe
Q psy1586 1 MSKSTIVFAASTSELLTYHKVELETLTPKEGWVEQDPMVILHLVEECIEKCVGYLVDLDINPNDIVAIGITNQRETTIVW 80 (431)
Q Consensus 1 ~s~K~~l~d~~~g~~l~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~I~~I~is~~~~~~v~~ 80 (431)
+|+|++||| .+|+++++.+.+++..+|++||.||||++||+++++++++++++ .++++.+|.+||||+|+|++|+|
T Consensus 13 ts~k~~l~d-~~G~il~~~~~~~~~~~p~~g~~e~dp~~~~~~~~~~i~~~~~~---~~~~~~~I~~Igis~~~~~~v~~ 88 (510)
T 2p3r_A 13 TSSRAVVMD-HDANIISVSQREFEQIYPKPGWVEHDPMEIWATQSSTLVEVLAK---ADISSDQIAAIGITNQRETTIVW 88 (510)
T ss_dssp SEEEEEEEC-TTCCEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHH---TTCCGGGEEEEEEEECSSCBEEE
T ss_pred cceEEEEEC-CCCCEEEEEEEecccccCCCCcEEECHHHHHHHHHHHHHHHHHH---cCCChhheEEEEEeCCcCcEEEE
Confidence 489999999 59999999999999989999999999999999999999999875 35667899999999999999999
Q ss_pred eCCCCccccccceecCcccHHHHHHHHhhccChhHHHhHhCCCCCccchHHHHHHHHhcchHHHHhhhcCcccccChhHH
Q psy1586 81 DSTTGKPLYNAIVWSDVRTKSIVDTYASKIKNTTFLTTICGLPISTYFSAVKLNWLMDNVDEVKNAIKDNKCLFGTVDSW 160 (431)
Q Consensus 81 d~~~g~pl~~~i~w~D~R~~~~~~~l~~~~~~~~~~~~~tG~~~~~~~~~~kl~wl~~~~p~~~~~~~~~~~~~~~~~d~ 160 (431)
|+++|+|++|+|+|+|+|+.++++++.+..+ .+.++++||+++++.++++||+||++|+|++|++++.+...|++++||
T Consensus 89 D~~~G~~l~~~i~W~D~R~~~~~~~l~~~~~-~~~~~~~tG~~~~~~~~~~kl~Wl~~~~pe~~~~~~~~~~l~~~~~dy 167 (510)
T 2p3r_A 89 EKETGKPIYNAIVWQCRRTAEICEHLKRDGL-EDYIRSNTGLVIDPYFSGTKVKWILDHVEGSRERARRGELLFGTVDTW 167 (510)
T ss_dssp ETTTCCBSSCEECTTCCTTHHHHHHHHHTTC-HHHHHHHHCCCSSTTSHHHHHHHHHHHSTTHHHHHHTTCEEEECHHHH
T ss_pred ECCCCeECcccccccCccHHHHHHHHHhccc-HHHHHHHhCCCCCcccHHHHHHHHHHcCHHHHHHHhcCCeEecCHHHH
Confidence 9934999999999999999999999998754 578999999999999999999999999999999986433458889999
Q ss_pred HHHHhcC--CCCCcceeeccchhcccccccccCCCCcHHHHhhcCCCCCCCCccccCCcccccccC-CC-CCCCcEEEec
Q psy1586 161 LIWNLTG--GVDGGLHITDVTNASRTLLMNLRTLQWEPQLLKFFNIPSQILPQIRSSSEIYGCLKD-GP-LQGVPISGIL 236 (431)
Q Consensus 161 l~~~LTG--~~~~~~~~~d~s~As~tgl~d~~~~~W~~~~l~~~gi~~~~lP~i~~~g~~~G~~~~-gl-~~g~pV~~g~ 236 (431)
|.|+||| + .++|+|+||+|+|||+++++|++++|+.+||+.++||+|+++++++|++.. ++ ++|+||++|+
T Consensus 168 l~~~LTG~~~-----~~td~s~As~t~l~d~~~~~W~~~ll~~~gi~~~~LP~i~~~~~~~G~~~~~~lG~~g~pV~~g~ 242 (510)
T 2p3r_A 168 LIWKMTQGRV-----HVTDYTNASRTMLFNIHTLDWDDKMLEVLDIPREMLPEVRRSSEVYGQTNIDGKGGTRIPISGIA 242 (510)
T ss_dssp HHHHHTTTSC-----CEEEHHHHHTTSSEETTTTEECHHHHHHHTCCGGGCCEEECSEEEEEEECTTCTTSCCEEEEEEE
T ss_pred HHHHhcCCCe-----EEeehhHhhhhccccCccCCCCHHHHHHhCCCHHHCCceecCCCceeeechhhcCCCCCeEEEEC
Confidence 9999999 6 999999999999999999999999999999999999999999999999943 33 8899999999
Q ss_pred CchHHhHHhcccCCCCcEEEEecccceeccccCCccccCCCCceeEEeeecCCCCCceEEEcccccchhhHHHHHHHHcC
Q psy1586 237 GDQQSALVGQSCLQAGQAKNTYGTGCFLLYNTGTAIVHSSQGLLTTVAYQFGARAPITYALEGSIAVAGQTFKWLRDNLN 316 (431)
Q Consensus 237 ~D~~aa~~g~g~~~~g~~~~~~GTs~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~w~~~~~~ 316 (431)
+|++|+++|+|++++|++++++|||+++.+.+...+..++.+++..++|..+ .++.|.++|+++++|.+++|+++.++
T Consensus 243 ~D~~aa~~g~g~~~~g~~~~s~GTs~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~~~G~~~~W~~~~~~ 320 (510)
T 2p3r_A 243 GDQQAALFGQLCVKEGMAKNTYGTGCFMLMNTGEKAVKSENGLLTTIACGPT--GEVNYALEGAVFMAGASIQWLRDEMK 320 (510)
T ss_dssp EHHHHHHHHTTCCSTTCEEEEESSSEEEEEECTTCCCCCSSSCEEEEEECTT--SCEEEEEEEEESCSHHHHHHHHHTSC
T ss_pred chHHHHHHhcCCCCCCcEEEeecchheeEEecCCccccCCCCeeEEEeeecC--CCceEEEccchhhHHHHHHHHHHHcc
Confidence 9999999999999999999999999977666655555556677776666431 25689999999999999999999987
Q ss_pred CCCCHHHHHHHHHhcCCCCCeEEEeCCCCCCCCCCCCCCceeEecCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhcCC
Q psy1586 317 IIADLNEIESLVQKSSSHTDVVFVPAFSGLYAPYWQRDARSIICGLTDETSKVDIVKAALEAVCFQTRDILEAMKEDCGV 396 (431)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~l~~~P~~~G~r~p~~~~~~~g~~~gl~~~~~~~~~~rA~~Egia~~~r~~~~~l~~~~g~ 396 (431)
...+|+++++++++++++++++|+|||.|+|+|+||+++||+|+|++.+|+++|++||++||+||.+|++++.|++..|.
T Consensus 321 ~~~~~~~l~~~a~~~~~~~gl~~~P~~~G~r~P~~d~~arg~~~Gl~~~~~~~~l~RAvlEgia~~~r~~~~~l~~~~g~ 400 (510)
T 2p3r_A 321 LINDAYDSEYFATKVQNTNGVYVVPAFTGLGAPYWDPYARGAIFGLTRGVNANHIIRATLESIAYQTRDVLEAMQADSGI 400 (510)
T ss_dssp CCCSSSCHHHHHTTSSSCTTCEEECCTTCCBTTTCCTTCCEEEEEECTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred CCCcHHHHHHHHhhCCCCCceEEeCcccCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 65678899999998888899999999999999999999999999999999999999999999999999999999886688
Q ss_pred CCceEEEEcCCccChHHHHHHhhhcCCceEecCC
Q psy1586 397 ALEKLLVDGGMTANKYLMQLQADLTGTPVSSSPI 430 (431)
Q Consensus 397 ~~~~i~~~GG~~~s~~~~qi~Advlg~pv~~~~~ 430 (431)
++++|+++||++||++|+||+||+||+||++++.
T Consensus 401 ~~~~i~~~GGga~s~~~~Qi~ADv~g~pV~~~~~ 434 (510)
T 2p3r_A 401 RLHALRVDGGAVANNFLMQFQSDILGTRVERPEV 434 (510)
T ss_dssp CCSEEEEESGGGGCHHHHHHHHHHHTSEEEEESC
T ss_pred CccEEEEeCchhcCHHHHHHHHHHhCCceEecCC
Confidence 9999999999999999999999999999998753
No 2
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O
Probab=100.00 E-value=2.9e-85 Score=670.92 Aligned_cols=418 Identities=43% Similarity=0.751 Sum_probs=379.7
Q ss_pred CCcEEEEEeCCCCeEEEEEEeecceecCCCCceeeCHHHHHHHHHHHHHHHHHhhhhcCCCCCCeeEEEEecccceEEEe
Q psy1586 1 MSKSTIVFAASTSELLTYHKVELETLTPKEGWVEQDPMVILHLVEECIEKCVGYLVDLDINPNDIVAIGITNQRETTIVW 80 (431)
Q Consensus 1 ~s~K~~l~d~~~g~~l~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~I~~I~is~~~~~~v~~ 80 (431)
+|+|++||| .+|+++++.+.+++..+|++||+||||++||+++++++++++++. ++++.+|.+||||+|+|++|+|
T Consensus 15 ts~k~~l~d-~~G~il~~~~~~~~~~~p~~g~~e~dp~~~~~~~~~~i~~~~~~~---~~~~~~I~~Igis~~~~~~v~~ 90 (506)
T 3h3n_X 15 TSSRAIIFD-RNGKKIGSSQKEFPQYFPKSGWVEHNANEIWNSVQSVIAGAFIES---GIRPEAIAGIGITNQRETTVVW 90 (506)
T ss_dssp SEEEEEEEE-TTSCEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHHH---TCCGGGEEEEEEEECSSCBEEE
T ss_pred CceEEEEEC-CCCCEEEEEEEecCccCCCCCcEEECHHHHHHHHHHHHHHHHHHc---CCChhheEEEEeeCCcccEEEE
Confidence 489999999 599999999999998889999999999999999999999997753 5566899999999999999999
Q ss_pred eCCCCccccccceecCcccHHHHHHHHhhccChhHHHhHhCCCCCccchHHHHHHHHhcchHHHHhhhcCcccccChhHH
Q psy1586 81 DSTTGKPLYNAIVWSDVRTKSIVDTYASKIKNTTFLTTICGLPISTYFSAVKLNWLMDNVDEVKNAIKDNKCLFGTVDSW 160 (431)
Q Consensus 81 d~~~g~pl~~~i~w~D~R~~~~~~~l~~~~~~~~~~~~~tG~~~~~~~~~~kl~wl~~~~p~~~~~~~~~~~~~~~~~d~ 160 (431)
|+++|+|++|+|+|+|+|+.++++++.+..+ .+.++++||+++++.++++||+||++|+|++|++++.+..+|++++||
T Consensus 91 D~~~G~~l~~~i~w~D~R~~~~~~~l~~~~~-~~~~~~~tG~~~~~~~~~~kl~Wl~~~~pe~~~~~~~~~~~~~~~~dy 169 (506)
T 3h3n_X 91 DKTTGQPIANAIVWQSRQSSPIADQLKVDGH-TEMIHEKTGLVIDAYFSATKVRWLLDNIEGAQEKADNGELLFGTIDSW 169 (506)
T ss_dssp ETTTCCBSSCEECTTCCTTHHHHHHHHHTTC-HHHHHHHHSCCCCTTSHHHHHHHHHHHSTTHHHHHHTTCEEEECHHHH
T ss_pred eCCCCeECCCceEecCcchHHHHHHHHhccC-HHHHHHHhCCCCCchhHHHHHHHHHHhCHHHHHHHhcCCeEEecHHHH
Confidence 9934999999999999999999999998754 578999999999999999999999999999999986444568899999
Q ss_pred HHHHhcC--CCCCcceeeccchhcccccccccCCCCcHHHHhhcCCCCCCCCccccCCcccccccCC--CCCCCcEEEec
Q psy1586 161 LIWNLTG--GVDGGLHITDVTNASRTLLMNLRTLQWEPQLLKFFNIPSQILPQIRSSSEIYGCLKDG--PLQGVPISGIL 236 (431)
Q Consensus 161 l~~~LTG--~~~~~~~~~d~s~As~tgl~d~~~~~W~~~~l~~~gi~~~~lP~i~~~g~~~G~~~~g--l~~g~pV~~g~ 236 (431)
|.|+||| + .++|+|+||+|+|||+++++|++++|+.+||++++||+|+++++++|++... +.+|+||++|+
T Consensus 170 l~~~LTG~~~-----~~td~s~As~t~l~d~~~~~W~~~ll~~~gi~~~~LP~i~~~~~~~G~~~~~~~lg~g~pV~~g~ 244 (506)
T 3h3n_X 170 LVWKLTDGQV-----HVTDYSNASRTMLYNIHKLEWDQEILDLLNIPSSMLPEVKSNSEVYGHTRSYRFYGSEVPIAGMA 244 (506)
T ss_dssp HHHHHTTTSC-----CEEEHHHHHTTTSEETTTTEECHHHHHHTTCCGGGCCEEECSEEEEEECCGGGTTTCCCEEEEEE
T ss_pred HHHHhcCCce-----eeeEHHHhhhhhCeecCCCCcCHHHHHHcCcCHHHCCceecCCCcceeeChHHhcCCCCeEEEEC
Confidence 9999999 5 8999999999999999999999999999999999999999999999999531 33799999999
Q ss_pred CchHHhHHhcccCCCCcEEEEecccceeccccCCccccCCCCceeEEeeecCCCCCceEEEcccccchhhHHHHHHHHcC
Q psy1586 237 GDQQSALVGQSCLQAGQAKNTYGTGCFLLYNTGTAIVHSSQGLLTTVAYQFGARAPITYALEGSIAVAGQTFKWLRDNLN 316 (431)
Q Consensus 237 ~D~~aa~~g~g~~~~g~~~~~~GTs~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~w~~~~~~ 316 (431)
+|++|+++|+|++++|++++++|||+++.+.++..+..+..+++..++|..+ .++.|.++++++++|.+++|+++.++
T Consensus 245 ~D~~aa~~g~g~~~~g~~~~s~GTs~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~~~~~~~g~~~~~G~~~~W~~~~~~ 322 (506)
T 3h3n_X 245 GDQQAALFGQMAFEKGMIKNTYGTGAFIVMNTGEEPQLSDNDLLTTIGYGIN--GKVYYALEGSIFVAGSAIQWLRDGLR 322 (506)
T ss_dssp EHHHHHHHHTTCCSTTCEEEEESSSEEEEEEEETCCCSCCTTSEEEEEEEET--TEEEEEEEEEECCSSHHHHHHHHTSC
T ss_pred CcHHHHHHhCCCCCCCcEEEEecchheeeeecCCccccCCCceEEEeeeecC--CCCEEEEecchhhHHHHHHHHHHHcC
Confidence 9999999999999999999999999987776655555556677776666431 13479999999999999999999987
Q ss_pred CCCCHHHHHHHHHhcCCCCCeEEEeCCCCCCCCCCCCCCceeEecCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhcCC
Q psy1586 317 IIADLNEIESLVQKSSSHTDVVFVPAFSGLYAPYWQRDARSIICGLTDETSKVDIVKAALEAVCFQTRDILEAMKEDCGV 396 (431)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~l~~~P~~~G~r~p~~~~~~~g~~~gl~~~~~~~~~~rA~~Egia~~~r~~~~~l~~~~g~ 396 (431)
...+|++++++++++|..++++|+|||.|+|+|+||+++||.|+|++..|+++|++||++||+||.+|.+++.|++..|.
T Consensus 323 ~~~~~~~l~~~a~~~~~~~gl~~~P~~~Ger~P~~d~~arg~~~Gl~~~~~~~~l~RAvlEgia~~~r~~~~~l~~~~g~ 402 (506)
T 3h3n_X 323 MIETSPQSEELAAKAKGDNEVYVVPAFTGLGAPYWDSEARGAVFGLTRGTTKEDFVRATLQAVAYQSKDVIDTMKKDSGI 402 (506)
T ss_dssp CCSSTTHHHHHHTTCCSCSCCEEECCTTCBCTTTCBTTCCCEEECCCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCS
T ss_pred CCCcHHHHHHHHhcCCCCCceEEeccccCCCCCccCCCCCEEEEccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 65689999999998886699999999999999999999999999999999999999999999999999999999886688
Q ss_pred CCceEEEEcCCccChHHHHHHhhhcCCceEecCC
Q psy1586 397 ALEKLLVDGGMTANKYLMQLQADLTGTPVSSSPI 430 (431)
Q Consensus 397 ~~~~i~~~GG~~~s~~~~qi~Advlg~pv~~~~~ 430 (431)
++++|+++||++||++|+||+||+||+||++++.
T Consensus 403 ~~~~i~~~GGga~s~~~~Qi~ADv~g~pV~~~~~ 436 (506)
T 3h3n_X 403 DIPLLKVDGGAAKNDLLMQFQADILDIDVQRAAN 436 (506)
T ss_dssp CCCEEEEESGGGGCHHHHHHHHHHHTSEEEECSS
T ss_pred CCCEEEEecccccCHHHHHHHHHHhCCeEEecCC
Confidence 9999999999999999999999999999998753
No 3
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A*
Probab=100.00 E-value=9.3e-86 Score=674.90 Aligned_cols=406 Identities=21% Similarity=0.229 Sum_probs=372.8
Q ss_pred CCcEEEEEeCCCCeEEEEEEeecceecCCCCceeeCHHHHHHHHHHHHHHHHHhhhhcCCCCCCeeEEEEecccceEEEe
Q psy1586 1 MSKSTIVFAASTSELLTYHKVELETLTPKEGWVEQDPMVILHLVEECIEKCVGYLVDLDINPNDIVAIGITNQRETTIVW 80 (431)
Q Consensus 1 ~s~K~~l~d~~~g~~l~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~I~~I~is~~~~~~v~~ 80 (431)
+|+|++||| .+|+++++.+.+++...|++||+||||++||+++++++++++ + .++++.+|.+||||+|++++|+|
T Consensus 15 ts~k~~l~d-~~G~il~~~~~~~~~~~p~~g~~e~dp~~~~~~~~~~i~~~~-~---~~~~~~~I~~Igis~q~~~~v~~ 89 (511)
T 3hz6_A 15 TEVKAALAD-RDGGLHFQRSIALETYGDGNGPVEQDAGDWYDAVQRIASSWW-Q---SGVDARRVSAIVLSGQMQNFLPL 89 (511)
T ss_dssp SEEEEEEEC-TTSCEEEEEEEECCCBSTTSSCCEECHHHHHHHHHHHHHHHH-T---TTCCGGGEEEEEEEECCSCBEEE
T ss_pred CceEEEEEC-CCCCEEEEEEeecceecCCCCCEEECHHHHHHHHHHHHHHHH-h---cCCChhHeEEEEEecccccEEEE
Confidence 489999999 599999999999999999999999999999999999999987 3 35566899999999999999999
Q ss_pred eCCCCccccccceecCcccHHHHHHHHhhccChhHHHhHhCCCCCccchHHHHHHHHhcchHHHHhhhcCcccccC-hhH
Q psy1586 81 DSTTGKPLYNAIVWSDVRTKSIVDTYASKIKNTTFLTTICGLPISTYFSAVKLNWLMDNVDEVKNAIKDNKCLFGT-VDS 159 (431)
Q Consensus 81 d~~~g~pl~~~i~w~D~R~~~~~~~l~~~~~~~~~~~~~tG~~~~~~~~~~kl~wl~~~~p~~~~~~~~~~~~~~~-~~d 159 (431)
|+ +|+|++|+|+|+|+|+.++++++.+..+ .+.++++||+++++.++++||+||++|+|++|+++ .+|++ ++|
T Consensus 90 D~-~G~pl~~~i~W~D~R~~~~~~~l~~~~~-~~~~~~~tG~~~~~~~~~~kl~wl~~~~p~~~~~~----~~~l~~~~d 163 (511)
T 3hz6_A 90 DQ-DHEPLHRAVLYSDKRPLKEAEEINARHG-ADNLWSALENPMTAASILPKLVFWRASFPQAFGRL----RHVVLGAKD 163 (511)
T ss_dssp CT-TSCBSSCEECTTCCCCHHHHHHHHHHHC-HHHHHHHHSSCCSTTSHHHHHHHHHHHCHHHHTTC----CEEECSHHH
T ss_pred CC-CcCCCcCceecCCCCHHHHHHHHHhccC-HHHHHHHHCCCCCchhHHHHHHHHHHhChHHHHHH----HHHhcCcHH
Confidence 99 7999999999999999999999998775 47899999999999999999999999999999887 48999 999
Q ss_pred HHHHHhcCCCCCcceeeccchhcccccccccCCCCcHHHHhhcCCCCCCCCccccCCccccccc------CCCCCCCcEE
Q psy1586 160 WLIWNLTGGVDGGLHITDVTNASRTLLMNLRTLQWEPQLLKFFNIPSQILPQIRSSSEIYGCLK------DGPLQGVPIS 233 (431)
Q Consensus 160 ~l~~~LTG~~~~~~~~~d~s~As~tgl~d~~~~~W~~~~l~~~gi~~~~lP~i~~~g~~~G~~~------~gl~~g~pV~ 233 (431)
||.|+|||+ .++|+|+||+|+|||+++++|++++|+.+||++++||+|+++++++|++. +||++|+||+
T Consensus 164 yl~~~LTG~-----~~~d~s~As~t~l~d~~~~~W~~~ll~~~gi~~~~LP~i~~~~~~~G~l~~~~a~~~Gl~~g~pV~ 238 (511)
T 3hz6_A 164 YVVLRLTGR-----HATDRTNASTTGLYRPKDDAWHVELLADYGFSLDLMPRLLEPGEQVGGVSALAARQTGFVSGTPVL 238 (511)
T ss_dssp HHHHHHHSC-----CEECHHHHHHTTCEETTTTEECHHHHHHTTCCGGGSCEECCTTSEEEECCHHHHHHHCCCTTCEEE
T ss_pred HHHHHHhCC-----ceeeHhHhhcccceeCCCCCcCHHHHHHhCCCHHHCCCCcCCCCcccccCHHHHHhhCCCCCCeEE
Confidence 999999999 99999999999999999999999999999999999999999999999993 5999999999
Q ss_pred EecCchHHhHHhcccCCCCcEEEEecccceeccccCCccccC-CCCceeEEeeecCCCCCceEEEcccccchhhHHHHHH
Q psy1586 234 GILGDQQSALVGQSCLQAGQAKNTYGTGCFLLYNTGTAIVHS-SQGLLTTVAYQFGARAPITYALEGSIAVAGQTFKWLR 312 (431)
Q Consensus 234 ~g~~D~~aa~~g~g~~~~g~~~~~~GTs~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~w~~ 312 (431)
+|++|++|+++|+|++++|++++++|||+++.+.++..+..+ +.+.+..+++ ..|+.|...++++++|.+++|++
T Consensus 239 ~g~~D~~aa~~g~g~~~~g~~~~s~GTs~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~g~~~~~G~~~~W~~ 314 (511)
T 3hz6_A 239 CGLGDAGAATLGVGVLDDEDAYLHLGTTGWLARLTQTDPVGDMPVGTIFRLAG----IIAGKTLQVAPVLNAGNILQWAL 314 (511)
T ss_dssp CCEEHHHHHHHHTTCCSTTCEEEEESSSEEEEEEEECCCCCSCCSSCCEEECS----SSTTEEEEEEEESSSHHHHHHHG
T ss_pred EECchHHHHHHhCCCCCCCcEEEEecchhhheeecCCeecccCCCCceEEEEE----ecCCceEEEeehhhHHHHHHHHH
Confidence 999999999999999999999999999999888776234434 4555555543 45777666689999999999999
Q ss_pred HHcC--CCCCHHHHHHHHHhcC-C---CCCeEEEeCCCCCCCCCCCCCCceeEecCCCCCCHHHHHHHHHhhhhHHHHHH
Q psy1586 313 DNLN--IIADLNEIESLVQKSS-S---HTDVVFVPAFSGLYAPYWQRDARSIICGLTDETSKVDIVKAALEAVCFQTRDI 386 (431)
Q Consensus 313 ~~~~--~~~~~~~~~~~~~~~~-~---~~~l~~~P~~~G~r~p~~~~~~~g~~~gl~~~~~~~~~~rA~~Egia~~~r~~ 386 (431)
+.++ ...+|+++++++++++ + +++++|+|||.|+|+|+||+++||+|+|++..|+++|++||++||+||.+|.+
T Consensus 315 ~~~~~~~~~~~~~l~~~a~~~~~g~~~~~gl~~~P~~~Ger~P~~d~~arg~~~Gl~~~~~~~~l~RAvlEgia~~~~~~ 394 (511)
T 3hz6_A 315 TLVGHRPGEDCAEYFHMAAAEVQGVTVPDGLLFVPYLHAERCPVELPAPRGALLGVTGATTRAQILLAVLEGAALSLRWC 394 (511)
T ss_dssp GGGTCCTTSCSHHHHHHHHHHHTTCCCCTTCEEEEESSCBCSSSCBSSCEEEEECCCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHhcccccccHHHHHHHHHhCCCCCCCCCCEEEeCCCCCCCCCCCCCccceEEEcCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 9987 5457999999998874 7 89999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCCCceEEEEcCCccChHHHHHHhhhcCCce-EecC
Q psy1586 387 LEAMKEDCGVALEKLLVDGGMTANKYLMQLQADLTGTPV-SSSP 429 (431)
Q Consensus 387 ~~~l~~~~g~~~~~i~~~GG~~~s~~~~qi~Advlg~pv-~~~~ 429 (431)
++.|++ |. +++|+++||++||++|+||+||+||+|| ++++
T Consensus 395 ~~~l~~--g~-~~~i~~~GGga~s~~~~Qi~ADv~g~pV~~~~~ 435 (511)
T 3hz6_A 395 AELLGM--EK-VGLLKVVGGGARSEAWLRMIADNLNVSLLVKPD 435 (511)
T ss_dssp HHHHTG--GG-CCEEEEESGGGGCHHHHHHHHHHHTCEEEECCC
T ss_pred HHHHhc--CC-CCEEEEeCchhcCHHHHHHHHHHHCCeeEEecC
Confidence 999986 77 8999999999999999999999999999 8764
No 4
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=100.00 E-value=3.7e-85 Score=673.15 Aligned_cols=420 Identities=45% Similarity=0.809 Sum_probs=378.9
Q ss_pred CCcEEEEEeCCCCeEEEEEEeecceecCCCCceeeCHHHHHHHHHHHHHHHHHhhhhcCCCCCCeeEEEEecccceEEEe
Q psy1586 1 MSKSTIVFAASTSELLTYHKVELETLTPKEGWVEQDPMVILHLVEECIEKCVGYLVDLDINPNDIVAIGITNQRETTIVW 80 (431)
Q Consensus 1 ~s~K~~l~d~~~g~~l~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~I~~I~is~~~~~~v~~ 80 (431)
+|+|++||| .+|+++++++.+++..+|+|||+||||++||+++++++++++++ +++++.+|++||||+|++++|+|
T Consensus 14 ss~Ka~l~d-~~G~~va~~~~~~~~~~p~~G~~Eqdp~~~w~~~~~~i~~~l~~---~~~~~~~I~aIgis~q~~~~v~~ 89 (526)
T 3ezw_A 14 TSSRAVVMD-HDANIISVSQREFEQIYPKPGWVEHDPMEIWATQSSTLVEVLAK---ADISSDQIAAIGITNQRETTIVW 89 (526)
T ss_dssp SEEEEEEEC-TTCCEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHH---HTCCGGGEEEEEEEECSSCBEEE
T ss_pred cceeeeEEc-CCCCEEEEEEEecCcccCCCCcEEECHHHHHHHHHHHHHHHHHH---cCCChhhEEEEEEeCCCCCEEEE
Confidence 589999999 59999999999999999999999999999999999999999876 36778899999999999999999
Q ss_pred eCCCCccccccceecCcccHHHHHHHHhhccChhHHHhHhCCCCCccchHHHHHHHHhcchHHHHhhhcCcccccChhHH
Q psy1586 81 DSTTGKPLYNAIVWSDVRTKSIVDTYASKIKNTTFLTTICGLPISTYFSAVKLNWLMDNVDEVKNAIKDNKCLFGTVDSW 160 (431)
Q Consensus 81 d~~~g~pl~~~i~w~D~R~~~~~~~l~~~~~~~~~~~~~tG~~~~~~~~~~kl~wl~~~~p~~~~~~~~~~~~~~~~~d~ 160 (431)
|+++|+||+|+|+|+|+|+.++++++.+... .+.++++||+++++.++++||+||++|+|++|++++.....+..+.+|
T Consensus 90 D~~~G~pl~~ai~W~D~R~~~~~~~l~~~~~-~~~i~~~tG~~~~~~~~~~kl~Wl~~~~p~~~~~~~~~~~~~~~i~~~ 168 (526)
T 3ezw_A 90 EKETGKPIYNAIVWQCRRTAEICEHLKRDGL-EDYIRSNTGLVIDPYFSGTKVKWILDHVEGSRERARRGELLFGTVDTW 168 (526)
T ss_dssp ETTTCCBSSCEECTTCCTTHHHHHHHHHTTC-HHHHHHHHCCCSSTTSHHHHHHHHHHHSTTHHHHHHTTCEEEECHHHH
T ss_pred ECCCCeEcccceecCCcchHHHHHHHHhhcc-HHHHHHHhCCCCCcccHHHHHHHHHHcCchHHHHHHHhhhhccchhHH
Confidence 9756999999999999999999999998754 578999999999999999999999999999999987555567789999
Q ss_pred HHHHhcCCCCCcceeeccchhcccccccccCCCCcHHHHhhcCCCCCCCCccccCCcccccccC--CCCCCCcEEEecCc
Q psy1586 161 LIWNLTGGVDGGLHITDVTNASRTLLMNLRTLQWEPQLLKFFNIPSQILPQIRSSSEIYGCLKD--GPLQGVPISGILGD 238 (431)
Q Consensus 161 l~~~LTG~~~~~~~~~d~s~As~tgl~d~~~~~W~~~~l~~~gi~~~~lP~i~~~g~~~G~~~~--gl~~g~pV~~g~~D 238 (431)
|.|+|||.. ..++|+|+||+|+|||+++++|++++++.+||+.++||+++++++++|.+.. .+..|+||++|++|
T Consensus 169 L~~~Lt~g~---~~~td~s~As~t~l~d~~~~~w~~~ll~~~gi~~~~LP~i~~~~~~~G~~~~~~~~~~gipV~~g~gD 245 (526)
T 3ezw_A 169 LIWKMTQGR---VHVTDYTNASRTMLFNIHTLDWDDKMLEVLDIPREMLPEVRRSSEVYGQTNIDGKGGTRIPISGIAGD 245 (526)
T ss_dssp HHHHHTTTS---CCEEEHHHHTTSSSEETTTTEECHHHHHHHTCCGGGCCEEECSEEEEEEECTTCTTSCCEEEEEEEEH
T ss_pred HhhhhcCCC---ceEEEchhhccccCcCccccCcCHHHHHHcCCCHHHCCCccccccccCccchhhhcCCCCcEEEEcch
Confidence 999999741 3789999999999999999999999999999999999999999999999953 45578999999999
Q ss_pred hHHhHHhcccCCCCcEEEEecccceeccccCCccccCCCCceeEEeeecCCCCCceEEEcccccchhhHHHHHHHHcCCC
Q psy1586 239 QQSALVGQSCLQAGQAKNTYGTGCFLLYNTGTAIVHSSQGLLTTVAYQFGARAPITYALEGSIAVAGQTFKWLRDNLNII 318 (431)
Q Consensus 239 ~~aa~~g~g~~~~g~~~~~~GTs~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~w~~~~~~~~ 318 (431)
++|+++|+|++++|++.+++|||+++.+.++.++..+..++.....+. +..++.|.++|++.++|.+++||++.++..
T Consensus 246 ~~aa~~G~g~~~~g~~~~s~GTs~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~y~~eg~~~~~G~~~~Wl~~~~~~~ 323 (526)
T 3ezw_A 246 QQAALFGQLCVKEGMAKNTYGTGCFMLMNTGEKAVKSENGLLTTIACG--PTGEVNYALEGAVFMAGASIQWLRDEMKLI 323 (526)
T ss_dssp HHHHHHHTTCCSTTCEEEEESSSEEEEEECTTSCCCCSSSCEEEEEEC--TTSCEEEEEEEEESCSHHHHHHHHHTSCCC
T ss_pred HHHHhhhccccccceeEEEeccCeeEecccCCccccccccceeeeeec--cCCcceeeeHHHHHHHHHHHHHHHHHhccc
Confidence 999999999999999999999999988887766665556665544332 235678999999999999999999998764
Q ss_pred CCHHHHHHHHHhcCCCCCeEEEeCCCCCCCCCCCCCCceeEecCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhcCCCC
Q psy1586 319 ADLNEIESLVQKSSSHTDVVFVPAFSGLYAPYWQRDARSIICGLTDETSKVDIVKAALEAVCFQTRDILEAMKEDCGVAL 398 (431)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~l~~~P~~~G~r~p~~~~~~~g~~~gl~~~~~~~~~~rA~~Egia~~~r~~~~~l~~~~g~~~ 398 (431)
....+.+.++...++++|++|+|||.|+|+|+|||++||+|+||+..|+++|++||++||+||.+|.+++.|++..|.++
T Consensus 324 ~~~~~~~~~~~~~~~~~gl~~lP~~~G~r~P~~d~~arG~~~Glt~~~~~~~i~RAvlEgia~~~r~~le~l~~~~g~~~ 403 (526)
T 3ezw_A 324 NDAYDSEYFATKVQNTNGVYVVPAFTGLGAPYWDPYARGAIFGLTRGVNANHIIRATLESIAYQTRDVLEAMQADSGIRL 403 (526)
T ss_dssp CSSSCHHHHHTTSSSCTTCEEECCTTCBCTTTCBTTCCEEEEEECTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_pred cchhHHHHHHhccCCCCCeEEeCCCCCCCCCCCCcccCeEEecCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 44444555566667999999999999999999999999999999999999999999999999999999999988789999
Q ss_pred ceEEEEcCCccChHHHHHHhhhcCCceEecCC
Q psy1586 399 EKLLVDGGMTANKYLMQLQADLTGTPVSSSPI 430 (431)
Q Consensus 399 ~~i~~~GG~~~s~~~~qi~Advlg~pv~~~~~ 430 (431)
++|+++||++||++|+||+|||||+||++++.
T Consensus 404 ~~i~v~GGgaks~~~~Qi~ADvlg~pV~~~~~ 435 (526)
T 3ezw_A 404 HALRVDGGAVANNFLMQFQSDILGTRVERPEV 435 (526)
T ss_dssp SEEEEESGGGGCHHHHHHHHHHHTSEEEEESC
T ss_pred CEEEEECchhhCHHHHHHHHHHHCCEEEeCCC
Confidence 99999999999999999999999999998764
No 5
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A*
Probab=100.00 E-value=4.1e-85 Score=669.09 Aligned_cols=405 Identities=23% Similarity=0.347 Sum_probs=368.7
Q ss_pred CCcEEEEEeCCCCeEEEEEEeecceecCCCCceeeCHHHHHHHHHHHHHHHHHhhhhcCCCCCCeeEEEEecccceEEEe
Q psy1586 1 MSKSTIVFAASTSELLTYHKVELETLTPKEGWVEQDPMVILHLVEECIEKCVGYLVDLDINPNDIVAIGITNQRETTIVW 80 (431)
Q Consensus 1 ~s~K~~l~d~~~g~~l~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~I~~I~is~~~~~~v~~ 80 (431)
+|+|++||| ++|+++++.+.+++...|+|||+||||++||+++++++++++++. + .+|++||||+|++++|+|
T Consensus 14 ts~K~~l~d-~~G~il~~~~~~~~~~~p~~g~~e~dp~~~~~~~~~~i~~~~~~~---~---~~I~~Igis~q~~~~v~~ 86 (504)
T 3ll3_A 14 TATKGVLYD-INGKAVASVSKGYPLIQTKVGQAEEDPKLIFDAVQEIIFDLTQKI---D---GKIAAISWSSQMHSLIGL 86 (504)
T ss_dssp SEEEEEEEE-TTSCEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHTC---S---SEEEEEEEEECSSCBEEE
T ss_pred CceEEEEEc-CCCCEEEEEEeecceecCCCCcEEECHHHHHHHHHHHHHHHHHhC---C---CCeEEEEEECCCCcEEEE
Confidence 589999999 599999999999999899999999999999999999999987652 1 689999999999999999
Q ss_pred eCCCCccccccceecCcccHHHHHHHHhhccChhHHHhHhCCCCCccchHHHHHHHHhcchHHHHhhhcCcccccChhHH
Q psy1586 81 DSTTGKPLYNAIVWSDVRTKSIVDTYASKIKNTTFLTTICGLPISTYFSAVKLNWLMDNVDEVKNAIKDNKCLFGTVDSW 160 (431)
Q Consensus 81 d~~~g~pl~~~i~w~D~R~~~~~~~l~~~~~~~~~~~~~tG~~~~~~~~~~kl~wl~~~~p~~~~~~~~~~~~~~~~~d~ 160 (431)
|+ +|+|++|+|+|+|+|+.++++++.+..+ .+.++++||+++++.++++||+|+++|+|++|+++ .+|++++||
T Consensus 87 D~-~G~pl~~~i~W~D~R~~~~~~~l~~~~~-~~~~~~~tG~~~~~~~~~~kl~wl~~~~pe~~~~~----~~~~~~~dy 160 (504)
T 3ll3_A 87 GS-DDELLTNSITWADNCAKSIVQDAKNRGF-AQQIYRKTGMPMHPMAPIYKLLWLKNKKTEVFSQA----QKWIGIKEY 160 (504)
T ss_dssp CT-TSCBSSCEECTTCCTTHHHHHHHHHHTH-HHHHHHHHCCCSCTTSHHHHHHHHHHHCHHHHHHC----CEEECHHHH
T ss_pred CC-CCCCcccceeCCccCHHHHHHHHHhccC-HHHHHHHHCCCCCcccHHHHHHHHHHcChHHHHHH----hheeCHHHH
Confidence 99 7999999999999999999999998765 47899999999999999999999999999999987 489999999
Q ss_pred HHHHhcCCCCCcceeeccchhcccccccccCCCCcHHHHhhcCCCCCCCCccccCCccccccc------CCCCCCCcEEE
Q psy1586 161 LIWNLTGGVDGGLHITDVTNASRTLLMNLRTLQWEPQLLKFFNIPSQILPQIRSSSEIYGCLK------DGPLQGVPISG 234 (431)
Q Consensus 161 l~~~LTG~~~~~~~~~d~s~As~tgl~d~~~~~W~~~~l~~~gi~~~~lP~i~~~g~~~G~~~------~gl~~g~pV~~ 234 (431)
|.|+|||+ .++|+|+||+|+|||+++++|++++|+.+||+.++||+|+++++++|+++ +||++|+||++
T Consensus 161 l~~~LTG~-----~~~d~s~As~t~l~d~~~~~W~~~ll~~~gi~~~~LP~i~~~~~~~G~l~~~~a~~~Gl~~g~pV~~ 235 (504)
T 3ll3_A 161 IIFRLTGK-----LVTDTTMAAGTGILNLKTLTWDQELLDILKIKKEQLPKIAQPTKVIFPIKTEYVKKLGIDSDTKIIL 235 (504)
T ss_dssp HHHHHHSC-----CEEEHHHHTTTTCBCTTTSSBCHHHHHHHTCCGGGSCEEECTTCEECCCCHHHHHHHTCCTTCEEEE
T ss_pred HHHHHhCC-----cccchhHhhcccCeeCCCCCcCHHHHHHcCCCHHHCCCeeCCcceeeccCHHHHHhcCCCcCCCEEE
Confidence 99999999 99999999999999999999999999999999999999999999999993 59999999999
Q ss_pred ecCchHHhHHhcccCCCCcEEEEecccceeccccCCccccCCCCceeEEeeecCCCCCceEEEcccccchhhHHHHHHHH
Q psy1586 235 ILGDQQSALVGQSCLQAGQAKNTYGTGCFLLYNTGTAIVHSSQGLLTTVAYQFGARAPITYALEGSIAVAGQTFKWLRDN 314 (431)
Q Consensus 235 g~~D~~aa~~g~g~~~~g~~~~~~GTs~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~w~~~~ 314 (431)
|++|++|+++|+|++++|++++++|||+++.+.++++. .++.+.+ ++|.. .++.|.++++++++|.+++|+++.
T Consensus 236 g~~D~~aa~~g~g~~~~g~~~~s~GTs~~~~~~~~~~~-~~~~~~~--~~~~~---~~~~~~~~g~~~~~G~~~~W~~~~ 309 (504)
T 3ll3_A 236 GASDGYLSTIGVNAIDSDHCALNVGTSGAIRTIVDQPK-IDPSASY--FCYPA---DKTHYLLGGPVNNGGIVFNWARQT 309 (504)
T ss_dssp EEEHHHHHHHTTTCCSTTEEEEEESSSEEEEEEESSCC-CCTTCCS--EEEEE---ETTEEEEEEEESCSHHHHHHHHHH
T ss_pred EccHHHHHHHhCCCCCCCcEEEEechhhhheeeCCCcc-cCCCCce--EEEEe---CCCeEEEEeehhhHHHHHHHHHHH
Confidence 99999999999999999999999999999888776543 3334443 34432 267899999999999999999998
Q ss_pred cCCC-CCHHHHHHHHHhcC-CCCCeEEEeCCCCCCCCCCCCCCceeEecCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHH
Q psy1586 315 LNII-ADLNEIESLVQKSS-SHTDVVFVPAFSGLYAPYWQRDARSIICGLTDETSKVDIVKAALEAVCFQTRDILEAMKE 392 (431)
Q Consensus 315 ~~~~-~~~~~~~~~~~~~~-~~~~l~~~P~~~G~r~p~~~~~~~g~~~gl~~~~~~~~~~rA~~Egia~~~r~~~~~l~~ 392 (431)
++.. .+++++.++++++| ++++++|+|||.|+|+|+||+++||+|+|++..|+++|++||++||+||.+|.+++.|++
T Consensus 310 ~~~~~~~~~~~~~~a~~~~~g~~gl~~~P~~~Ger~P~~d~~arg~~~Gl~~~~~~~~l~RAvlEgia~~~r~~~~~l~~ 389 (504)
T 3ll3_A 310 LFDADETPQDFLDVAQTAPAGSRNLIFLPYLGGERAPIWDANARGSFVGLTRMHQKPEMARAVIEGIIFNLYDAASNLIK 389 (504)
T ss_dssp HTCTTCCHHHHHHHHHTSCTTGGGCEEECCTTCBCTTTCBTTCCEEEEEECTTCCHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred hccchhHHHHHHHHHhcCCCCCCCeEEecCccCCCCCCCCCccCeEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8642 23455555777776 889999999999999999999999999999999999999999999999999999999987
Q ss_pred hcCCCCceEEEEcCCccChHHHHHHhhhcCCceEecCC
Q psy1586 393 DCGVALEKLLVDGGMTANKYLMQLQADLTGTPVSSSPI 430 (431)
Q Consensus 393 ~~g~~~~~i~~~GG~~~s~~~~qi~Advlg~pv~~~~~ 430 (431)
.|.++++|+++||++||++|+||+||+||+||++++.
T Consensus 390 -~g~~~~~i~~~GGga~s~~~~Qi~ADv~g~pV~~~~~ 426 (504)
T 3ll3_A 390 -NTKKPVAINATGGFLKSDFVRQLCANIFNVPIVTMKE 426 (504)
T ss_dssp -TSCCCSEEEEESGGGCSHHHHHHHHHHHTSCEEEESC
T ss_pred -cCCCCCEEEEeCchhcCHHHHHHHHHhhCCeEEecCC
Confidence 4778999999999999999999999999999998753
No 6
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}
Probab=100.00 E-value=3e-85 Score=672.06 Aligned_cols=419 Identities=44% Similarity=0.741 Sum_probs=372.9
Q ss_pred CCcEEEEEeCCCCeEEEEEEeecceecCCCCceeeCHHHHHHHHHHHHHHHHHhhhhcCCCCCCeeEEEEecccceEEEe
Q psy1586 1 MSKSTIVFAASTSELLTYHKVELETLTPKEGWVEQDPMVILHLVEECIEKCVGYLVDLDINPNDIVAIGITNQRETTIVW 80 (431)
Q Consensus 1 ~s~K~~l~d~~~g~~l~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~I~~I~is~~~~~~v~~ 80 (431)
+|+|++||| .+|+++++.+.+++..+|++||+||||++||+++++++++++++ .++++.+|.+|||++|++++|+|
T Consensus 36 ts~k~~l~d-~~G~il~~~~~~~~~~~p~~g~~e~dp~~~~~~i~~~i~~~~~~---~~~~~~~I~~Igis~~g~~~v~~ 111 (520)
T 4e1j_A 36 TSTRAIVFD-GNQKIAGVGQKEFKQHFPKSGWVEHDPEEIWQTVVSTVKEAIEK---SGITANDIAAIGITNQRETVVVW 111 (520)
T ss_dssp SEEEEEEEC-TTSCEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHT---TTCCGGGEEEEEEEECSSCEEEE
T ss_pred cceEEEEEC-CCCCEEEEEEEecccccCCCCcEEECHHHHHHHHHHHHHHHHHh---cCCCcccEEEEEEeCCcceEEEE
Confidence 479999999 59999999999999888999999999999999999999999765 35566899999999999999999
Q ss_pred eCCCCccccccceecCcccHHHHHHHHhhccChhHHHhHhCCCCCccchHHHHHHHHhcchHHHHhhhcCcccccChhHH
Q psy1586 81 DSTTGKPLYNAIVWSDVRTKSIVDTYASKIKNTTFLTTICGLPISTYFSAVKLNWLMDNVDEVKNAIKDNKCLFGTVDSW 160 (431)
Q Consensus 81 d~~~g~pl~~~i~w~D~R~~~~~~~l~~~~~~~~~~~~~tG~~~~~~~~~~kl~wl~~~~p~~~~~~~~~~~~~~~~~d~ 160 (431)
|+++|+|++|+|+|+|+|+.++++++.+..+ .+.++++||+++++.++++||+||++|+|++|++++.+..+|++++||
T Consensus 112 D~~~G~~l~~~i~W~D~R~~~~~~~l~~~~~-~~~~~~~tG~~~~~~~~~~kl~Wl~~~~Pe~~~~~~~~~~~~~~~~dy 190 (520)
T 4e1j_A 112 DRETGKPIHNAIVWQDRRTAAFCDKLKKKGL-EKTFVKKTGLLLDPYFSGTKLNWLLSNVKGAQVRAAKGELCFGTIDTF 190 (520)
T ss_dssp ETTTCCBSSCEECTTCCTTHHHHHHHHHTTC-HHHHHHHHSSCSSTTSHHHHHHHHHHHSTTHHHHHHTTCEEEEEHHHH
T ss_pred ECCCCeECccccccccCCHHHHHHHHHhccc-HHHHHHHHCCCCCchhHHHHHHHHHHcChHHHHHHhcCCeEecCHHHH
Confidence 9437999999999999999999999998754 578999999999999999999999999999999986433457789999
Q ss_pred HHHHhcCCCCCcceeeccchhcccccccccCCCCcHHHHhhcCCCCCCCCccccCCccccccc-CCCCCCCcEEEecCch
Q psy1586 161 LIWNLTGGVDGGLHITDVTNASRTLLMNLRTLQWEPQLLKFFNIPSQILPQIRSSSEIYGCLK-DGPLQGVPISGILGDQ 239 (431)
Q Consensus 161 l~~~LTG~~~~~~~~~d~s~As~tgl~d~~~~~W~~~~l~~~gi~~~~lP~i~~~g~~~G~~~-~gl~~g~pV~~g~~D~ 239 (431)
|.|+|||+. ..++|+|+||+|+|||+++++|++++|+.+||++++||+|+++++++|++. .||++|+||++|++|+
T Consensus 191 l~~~LTG~~---~~~td~s~As~t~l~d~~~~~W~~~ll~~~gi~~~~LP~i~~~~~~~G~~~~~~l~~g~pV~~g~~D~ 267 (520)
T 4e1j_A 191 LIWRLTGGE---CFCTDATNASRTLLYNIAENAWDDELTEVLRVPKEMLPEVKDCAADFGVTDPSLFGAAIPILGVAGDQ 267 (520)
T ss_dssp HHHHHTTTC---CCEEEHHHHTTSSSEETTTTEECHHHHHHHTCCGGGSCEEECSBSCCCBCCHHHHTSCCBEEEECCHH
T ss_pred HHHHhcCCC---eeeecHHHhhhhcccccccCCCCHHHHHHcCCCHHHCCceecCCCceeeeChhhCCCCCeEEEECCcH
Confidence 999999951 179999999999999999999999999999999999999999999999994 3678999999999999
Q ss_pred HHhHHhcccCCCCcEEEEecccceeccccCCccccCCCCceeEEeeecCCCCCceEEEcccccchhhHHHHHHHHcCCCC
Q psy1586 240 QSALVGQSCLQAGQAKNTYGTGCFLLYNTGTAIVHSSQGLLTTVAYQFGARAPITYALEGSIAVAGQTFKWLRDNLNIIA 319 (431)
Q Consensus 240 ~aa~~g~g~~~~g~~~~~~GTs~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~w~~~~~~~~~ 319 (431)
+|+++|+|++++|++++++|||+++.+.++..+..+..++++.++|..+ .++.|.++++++++|.+++|+++.++...
T Consensus 268 ~aa~~g~g~~~~g~~~~s~GTs~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~~~G~~~~W~~~~~~~~~ 345 (520)
T 4e1j_A 268 QAATIGQACFKPGMLKSTYGTGCFALLNTGKDMVRSKNRLLTTIAYRLD--GETTYALEGSIFVAGAAVQWLRDGLKVIK 345 (520)
T ss_dssp HHHHHHTTCCSTTCEEEEESSSEEEEEECTTCCCCCSSSCEEEEEEEET--TEEEEEEEEEESCSHHHHHHHHHTTCCC-
T ss_pred HHHHHhCCCCCCCcEEEEecCchheEEecCCccccCCCceeeEEeEecC--CCceEEEcchHhhHHHHHHHHHHHcCCcc
Confidence 9999999999999999999999987776644455555677776666542 24589999999999999999999987656
Q ss_pred CHHHHHHHHHhcCCCCCeEEEeCCCCCCCCCCCCCCceeEecCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHh---cCC
Q psy1586 320 DLNEIESLVQKSSSHTDVVFVPAFSGLYAPYWQRDARSIICGLTDETSKVDIVKAALEAVCFQTRDILEAMKED---CGV 396 (431)
Q Consensus 320 ~~~~~~~~~~~~~~~~~l~~~P~~~G~r~p~~~~~~~g~~~gl~~~~~~~~~~rA~~Egia~~~r~~~~~l~~~---~g~ 396 (431)
+|++++++++++|++++++|+|||.|+|+|+||+++||.|+|++..|+++|++||++||+||.+|.+++.|++. .|
T Consensus 346 ~~~~l~~~a~~~~~~~gl~~lP~l~Ger~P~~d~~arg~~~Gl~~~~~~~~l~RAvlEgia~~~r~~l~~l~~~~~~~g- 424 (520)
T 4e1j_A 346 AAPDTGSLAESADPSQEVYLVPAFTGLGAPHWDPDARGAIFGMTRNTGPAEFARAALEAVCYQTRDLLEAMHKDWRRNG- 424 (520)
T ss_dssp ----CHHHHHTSCTTCCCEEECCTTCBCTTTCBTTCCCEEEEECTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC----
T ss_pred cHHHHHHHHhcCCCCCcEEEEcCccCCCCCCCCCCCCEEEecccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC-
Confidence 78899999999999999999999999999999999999999999999999999999999999999999999986 47
Q ss_pred CCceEEEEcCCccChHHHHHHhhhcCCceEecCC
Q psy1586 397 ALEKLLVDGGMTANKYLMQLQADLTGTPVSSSPI 430 (431)
Q Consensus 397 ~~~~i~~~GG~~~s~~~~qi~Advlg~pv~~~~~ 430 (431)
++++|+++||++||++|+||+||+||+||++++.
T Consensus 425 ~~~~i~~~GGgaks~~~~Qi~ADvlg~pV~~~~~ 458 (520)
T 4e1j_A 425 NDTVLRVDGGMVASDWTMQRLSDLLDAPVDRPVI 458 (520)
T ss_dssp --CCEEEESGGGGCHHHHHHHHHHHTSCEEEESC
T ss_pred CcceEEEeCccccCHHHHHHHHHHhCCeEEecCC
Confidence 8899999999999999999999999999998753
No 7
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum}
Probab=100.00 E-value=1.1e-85 Score=673.96 Aligned_cols=407 Identities=20% Similarity=0.279 Sum_probs=369.3
Q ss_pred CCcEEEEEeCCCCeEEEEEEeecceecCCCCceeeCHHHHHHHHHHHHHHHHHhhhhcCCCCCCeeEEEEecccceEEEe
Q psy1586 1 MSKSTIVFAASTSELLTYHKVELETLTPKEGWVEQDPMVILHLVEECIEKCVGYLVDLDINPNDIVAIGITNQRETTIVW 80 (431)
Q Consensus 1 ~s~K~~l~d~~~g~~l~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~I~~I~is~~~~~~v~~ 80 (431)
+|+|++||| ++|+++++.+.+++...|++||.||||++||+++++++++++++. ++++.+|.+||||+|++++|+|
T Consensus 17 ts~k~~l~d-~~G~il~~~~~~~~~~~p~~g~~e~dp~~~~~~i~~~i~~~~~~~---~~~~~~I~~Igis~~~~~~v~~ 92 (508)
T 3ifr_A 17 TSTIAILVR-LPDTVVAVASRPTTLSSPHPGWAEEDPAQWWDNARAVLAELKTTA---GESDWRPGGICVTGMLPAVVLL 92 (508)
T ss_dssp SEEEEEEEE-TTTEEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHHH---CGGGCCEEEEEEEECSSCBEEE
T ss_pred cceEEEEEC-CCCCEEEEEEEecceecCCCCceEECHHHHHHHHHHHHHHHHHhc---CCChhheEEEEEECCCCcEEEE
Confidence 479999999 699999999999999999999999999999999999999997653 4556899999999999999999
Q ss_pred eCCCCccccccceecCcccHHHHHHHHhhccChhHHHhHhCCCCCccchHHHHHHHHhcchHHHHhhhcCcccccChhHH
Q psy1586 81 DSTTGKPLYNAIVWSDVRTKSIVDTYASKIKNTTFLTTICGLPISTYFSAVKLNWLMDNVDEVKNAIKDNKCLFGTVDSW 160 (431)
Q Consensus 81 d~~~g~pl~~~i~w~D~R~~~~~~~l~~~~~~~~~~~~~tG~~~~~~~~~~kl~wl~~~~p~~~~~~~~~~~~~~~~~d~ 160 (431)
|+ +|+|++|+|+|+|+|+.++++++++..+ .+.++++||+++++.++++||+||++|+|++|+++ .+|++++||
T Consensus 93 D~-~G~~l~~~i~W~D~R~~~~~~~l~~~~~-~~~~~~~tG~~~~~~~~~~kl~wl~~~~p~~~~~~----~~~l~~~dy 166 (508)
T 3ifr_A 93 DD-RGAVLRPSIQQSDGRCGDEVAELRAEVD-SEAFLARTGNGVTQQLVTAKLRWIERHEPAVFGAI----ATVCGSYDY 166 (508)
T ss_dssp CT-TSCBCSCEECTTCCCCHHHHHHHHHHSC-HHHHHHHHSSCSSTTSHHHHHHHHHHHCHHHHHTC----SEEECHHHH
T ss_pred CC-CCCCcccceeccccChHHHHHHHHhhcc-HHHHHHHHCCCCChhhHHHHHHHHHHcCHHHHHHH----hhhcCchHH
Confidence 99 6999999999999999999999998876 47799999999999999999999999999999987 478899999
Q ss_pred HHHHhcCCCCCcceeeccchhcccccccccCCCCcHHHHhhcCCCCCCCCccccCCccccccc------CCCCCCCcEEE
Q psy1586 161 LIWNLTGGVDGGLHITDVTNASRTLLMNLRTLQWEPQLLKFFNIPSQILPQIRSSSEIYGCLK------DGPLQGVPISG 234 (431)
Q Consensus 161 l~~~LTG~~~~~~~~~d~s~As~tgl~d~~~~~W~~~~l~~~gi~~~~lP~i~~~g~~~G~~~------~gl~~g~pV~~ 234 (431)
|.|+|||+ .++|+|+||+|++||+++++|++++|+.+||+.++||+|+++++++|++. +||++|+||++
T Consensus 167 l~~~LTG~-----~~~d~s~As~t~l~d~~~~~W~~~ll~~~gi~~~~LP~i~~~~~~~G~l~~~~a~~~Gl~~g~pV~~ 241 (508)
T 3ifr_A 167 INMLLTGE-----RVVDRNWALEGGFIDLASGTVEADLVALAHIPPSAVPPAHPTHRVLGAVTAEAAALTGLPTGLPVYG 241 (508)
T ss_dssp HHHHHHCC-----CCEEHHHHHHHTCEETTTTEECHHHHHTTTSCGGGSCCEECTTSEEEECCHHHHHHHCCCTTCEEEC
T ss_pred HHHHhcCC-----ccccHhHhhcccCccCccCCCCHHHHHHcCCCHHHCCCCcCCCCeeeccCHHHHHHhCCCCCCeEEE
Confidence 99999999 99999999999999999999999999999999999999999999999994 59999999999
Q ss_pred ecCchHHhHHhcccCCCCcEEEEecccceeccccCCccccCCCCceeEEeeecCCCCCceEEEcccccchhhHHHHHHHH
Q psy1586 235 ILGDQQSALVGQSCLQAGQAKNTYGTGCFLLYNTGTAIVHSSQGLLTTVAYQFGARAPITYALEGSIAVAGQTFKWLRDN 314 (431)
Q Consensus 235 g~~D~~aa~~g~g~~~~g~~~~~~GTs~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~w~~~~ 314 (431)
|++|++|+++|+|++++|++++++|||+++.+.++++ ...+. +..++ +..|+.|.++++++++|.+++|+++.
T Consensus 242 g~~D~~aa~~g~g~~~~g~~~~s~GTs~~~~~~~~~~-~~~~~--~~~~~----~~~~g~~~~~g~~~~~G~~~~W~~~~ 314 (508)
T 3ifr_A 242 GAADHIASALAAGITRPGDVLLKFGGAGDIIVASATA-KSDPR--LYLDY----HLVPGLYAPNGCMAATGSALNWLAKL 314 (508)
T ss_dssp CEEHHHHHHHHTTCCSTTEEEEEESSSEEEEECBSCC-CCBTT--BBCCB----CSSTTCBCCEEEESSSHHHHHHHHHH
T ss_pred ECchHHHHHHhCCCCCCCcEEEEechhhhheeeCCCc-ccCCC--cceee----eecCCceEEechhhhhHHHHHHHHHH
Confidence 9999999999999999999999999999988877653 32222 22233 24588999999999999999999998
Q ss_pred cCC-CC--CHHHHHHHHHhcC-CCCCeEEEeCCCCCCCCCCCCCCceeEecCCCCCCHHHHHHHHHhhhhHHHHHHHHHH
Q psy1586 315 LNI-IA--DLNEIESLVQKSS-SHTDVVFVPAFSGLYAPYWQRDARSIICGLTDETSKVDIVKAALEAVCFQTRDILEAM 390 (431)
Q Consensus 315 ~~~-~~--~~~~~~~~~~~~~-~~~~l~~~P~~~G~r~p~~~~~~~g~~~gl~~~~~~~~~~rA~~Egia~~~r~~~~~l 390 (431)
+.. .. +|+++++++++++ ++++++|+|||.|+|+|+||+++||.|+|++..|+++|++||++||+||.+|.+++.|
T Consensus 315 ~~~~~~~~~~~~l~~~a~~~~~~~~gl~flP~~~Ger~P~~d~~arg~~~Gl~~~~~~~~l~rAvlEgia~~~~~~~~~l 394 (508)
T 3ifr_A 315 LAPEAGEAAHAQLDALAAEVPAGADGLVCLPYFLGEKTPIHDPFASGTFTGLSLSHTRGHLWRALLEAVALAFRHHVAVL 394 (508)
T ss_dssp HSTTCTTHHHHHHHHHHHTSCTTGGGCEEECCTTCCC----CCCCCCEEESCCTTCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhhcCCCCCHHHHHHHHhcCCCCCCCeEEecCCCCCCCCCCCCCcCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 842 12 6899999988865 8999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCCCceEEEEcCCccChHHHHHHhhhcCCceEecCC
Q psy1586 391 KEDCGVALEKLLVDGGMTANKYLMQLQADLTGTPVSSSPI 430 (431)
Q Consensus 391 ~~~~g~~~~~i~~~GG~~~s~~~~qi~Advlg~pv~~~~~ 430 (431)
++ .|.++++|+++||++||++|+||+||+||+||++++.
T Consensus 395 ~~-~g~~~~~i~~~GGga~s~~~~Qi~ADv~g~pV~~~~~ 433 (508)
T 3ifr_A 395 DD-IGHAPQRFFASDGGTRSRVWMGIMADVLQRPVQLLAN 433 (508)
T ss_dssp HH-HTCCCCEEEEESGGGGCHHHHHHHHHHHTSCEEEEEC
T ss_pred Hh-cCCCCCEEEEeCCcccCHHHHHHHHHHhCCeEEecCC
Confidence 87 4889999999999999999999999999999998763
No 8
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A*
Probab=100.00 E-value=1e-84 Score=666.52 Aligned_cols=418 Identities=43% Similarity=0.797 Sum_probs=379.5
Q ss_pred CCcEEEEEeCCCCeEEEEEEeecceecCCCCceeeCHHHHHHHHHHHHHHHHHhhhhcCCCCCCeeEEEEecccceEEEe
Q psy1586 1 MSKSTIVFAASTSELLTYHKVELETLTPKEGWVEQDPMVILHLVEECIEKCVGYLVDLDINPNDIVAIGITNQRETTIVW 80 (431)
Q Consensus 1 ~s~K~~l~d~~~g~~l~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~I~~I~is~~~~~~v~~ 80 (431)
+|+|++||| .+|+++++.+.+++...|++|+.||||++||+++++++++++++ .++++.+|.+||||+|+|++++|
T Consensus 16 ts~k~~l~d-~~G~il~~~~~~~~~~~p~~g~~e~d~~~~~~~~~~~i~~~~~~---~~~~~~~I~~Igis~~~~~~v~~ 91 (501)
T 3g25_A 16 TSSRAILFN-QKGEIAGVAQREFKQYFPQSGWVEHDANEIWTSVLAVMTEVINE---NDVRADQIAGIGITNQRETTVVW 91 (501)
T ss_dssp SEEEEEEEC-TTSCEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHT---TTCCGGGEEEEEEEECSSCEEEE
T ss_pred cceEEEEEc-CCCCEEEEEEeecccccCCCCcEEECHHHHHHHHHHHHHHHHHh---cCCCcccEEEEEEECCcCcEEEE
Confidence 479999999 59999999999999888999999999999999999999999765 35567899999999999999999
Q ss_pred eCCCCccccccceecCcccHHHHHHHHhhccChhHHHhHhCCCCCccchHHHHHHHHhcchHHHHhhhcCcccccChhHH
Q psy1586 81 DSTTGKPLYNAIVWSDVRTKSIVDTYASKIKNTTFLTTICGLPISTYFSAVKLNWLMDNVDEVKNAIKDNKCLFGTVDSW 160 (431)
Q Consensus 81 d~~~g~pl~~~i~w~D~R~~~~~~~l~~~~~~~~~~~~~tG~~~~~~~~~~kl~wl~~~~p~~~~~~~~~~~~~~~~~d~ 160 (431)
|+++|+|++|+|+|+|+|+.++++++.+..+ .+.++++||+++++.++++||+||++|+|++|+++++....|++++||
T Consensus 92 D~~~G~~l~~~i~w~D~R~~~~~~~l~~~~~-~~~~~~~tG~~~~~~~~~~kl~wl~~~~p~~~~~~~~~~~l~~~~~dy 170 (501)
T 3g25_A 92 DKHTGRPIYHAIVWQSRQTQSICSELKQQGY-EQTFRDKTGLLLDPYFAGTKVKWILDNVEGAREKAENGDLLFGTIDTW 170 (501)
T ss_dssp ETTTCCBSSCEECTTCCTTHHHHHHHHHTTC-HHHHHHHHSCCSSTTSHHHHHHHHHHHSTTHHHHHHTTCEEEEEHHHH
T ss_pred ECCCCeECCCceeeccCChHHHHHHHHhccC-HHHHHHHHCCCCCchhHHHHHHHHHHhCHHHHHHHhcCCeEEecHHHH
Confidence 9933999999999999999999999998754 578999999999999999999999999999999986433458889999
Q ss_pred HHHHhcC--CCCCcceeeccchhcccccccccCCCCcHHHHhhcCCCCCCCCccccCCcccccccC-C-CCCCCcEEEec
Q psy1586 161 LIWNLTG--GVDGGLHITDVTNASRTLLMNLRTLQWEPQLLKFFNIPSQILPQIRSSSEIYGCLKD-G-PLQGVPISGIL 236 (431)
Q Consensus 161 l~~~LTG--~~~~~~~~~d~s~As~tgl~d~~~~~W~~~~l~~~gi~~~~lP~i~~~g~~~G~~~~-g-l~~g~pV~~g~ 236 (431)
|.|+||| + .++|+|+||+|+|||+++++|++++|+.+||++++||+|+++++++|++.. + +.+|+||++|+
T Consensus 171 l~~~LTG~~~-----~~td~s~As~t~l~d~~~~~W~~~ll~~~gi~~~~LP~i~~~~~~~G~~~~~~~~g~g~pV~~g~ 245 (501)
T 3g25_A 171 LVWKLSGKAA-----HITDYSNASRTLMFNIHDLEWDDELLELLTVPKNMLPEVKASSEVYGKTIDYHFYGQEVPIAGVA 245 (501)
T ss_dssp HHHHHTTTSC-----CEEEHHHHTTSSSEETTTTEECHHHHHHHTCCGGGCCEEECSEEEEEECCGGGTTTCCCEEEEEE
T ss_pred HHHHhcCCCe-----eeeeHHHhhcccCeeCCCCCCCHHHHHHhCcCHHHCCceecCCCceeccchHHhCCCCCeEEEEC
Confidence 9999999 6 999999999999999999999999999999999999999999999999943 2 24799999999
Q ss_pred CchHHhHHhcccCCCCcEEEEecccceeccccCCccccCCCCceeEEeeecCCCCCceEEEcccccchhhHHHHHHHHcC
Q psy1586 237 GDQQSALVGQSCLQAGQAKNTYGTGCFLLYNTGTAIVHSSQGLLTTVAYQFGARAPITYALEGSIAVAGQTFKWLRDNLN 316 (431)
Q Consensus 237 ~D~~aa~~g~g~~~~g~~~~~~GTs~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~w~~~~~~ 316 (431)
+|++|+++|+|++++|++++++|||+++.+.++..+..++.+++..++|..+ .+..|.++++++++|.+++|+++.++
T Consensus 246 ~D~~aa~~g~g~~~~g~~~~s~GTs~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~~~G~~~~W~~~~~~ 323 (501)
T 3g25_A 246 GDQQAALFGQACFERGDVKNTYGTGGFMLMNTGDKAVKSESGLLTTIAYGID--GKVNYALEGSIFVSGSAIQWLRDGLR 323 (501)
T ss_dssp EHHHHHHHHTTCCSTTCEEEEESSSEEEEEECTTSCCCCSSSCEEEEEEEET--TEEEEEEEEEESCSTHHHHHHHHTSC
T ss_pred ccHHHHHHhCCCCCCCcEEEEccchhheeeecCCccccCCCCeEEEeeEecC--CccEEEEecccccHHHHHHHHHHHcC
Confidence 9999999999999999999999999987776665555555677776666432 12379999999999999999999987
Q ss_pred CCCCHHHHHHHHHhcCCCCCeEEEeCCCCCCCCCCCCCCceeEecCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhcCC
Q psy1586 317 IIADLNEIESLVQKSSSHTDVVFVPAFSGLYAPYWQRDARSIICGLTDETSKVDIVKAALEAVCFQTRDILEAMKEDCGV 396 (431)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~l~~~P~~~G~r~p~~~~~~~g~~~gl~~~~~~~~~~rA~~Egia~~~r~~~~~l~~~~g~ 396 (431)
...+|++++++++++|..++++|+|||.|+|+|+||+++||+|+|++..|+++|++||++||+||.+|.+++.|++..|.
T Consensus 324 ~~~~~~~l~~~a~~~~~~~gl~~~P~~~G~r~P~~d~~arg~~~Gl~~~~~~~~l~RAvlEgia~~~~~~~~~l~~~~g~ 403 (501)
T 3g25_A 324 MINSAPQSESYATRVDSTEGVYVVPAFVGLGTPYWDSEARGAIFGLTRGTEKEHFIRATLESLCYQTRDVMEAMSKDSGI 403 (501)
T ss_dssp CCSSGGGHHHHHTTSSCCTTCEEECCTTCBCTTTCBTTCCEEEEEECTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHSSC
T ss_pred CCCcHHHHHHHHhhCCCCCeEEEecccccCCCCCCCCCCCEEEEccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 65689999999998887799999999999999999999999999999999999999999999999999999999886788
Q ss_pred CCceEEEEcCCccChHHHHHHhhhcCCceEecCC
Q psy1586 397 ALEKLLVDGGMTANKYLMQLQADLTGTPVSSSPI 430 (431)
Q Consensus 397 ~~~~i~~~GG~~~s~~~~qi~Advlg~pv~~~~~ 430 (431)
++++|+++||++||++|+||+||+||+||++++.
T Consensus 404 ~~~~i~~~GG~aks~~~~Qi~Adv~g~pV~~~~~ 437 (501)
T 3g25_A 404 DVQSLRVDGGAVKNNFIMQFQADIVNTSVERPEI 437 (501)
T ss_dssp CCSEEEEESGGGGCHHHHHHHHHHHTSEEEEESC
T ss_pred CCcEEEEecchhcCHHHHHHHHHHhCCceEecCC
Confidence 9999999999999999999999999999988754
No 9
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=100.00 E-value=7.6e-82 Score=644.66 Aligned_cols=415 Identities=47% Similarity=0.784 Sum_probs=377.2
Q ss_pred CCcEEEEEeCCCCeEEEEEEeecceecCCCCceeeCHHHHHHHHHHHHHHHHHhhhhcCCCCCCeeEEEEecccceEEEe
Q psy1586 1 MSKSTIVFAASTSELLTYHKVELETLTPKEGWVEQDPMVILHLVEECIEKCVGYLVDLDINPNDIVAIGITNQRETTIVW 80 (431)
Q Consensus 1 ~s~K~~l~d~~~g~~l~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~I~~I~is~~~~~~v~~ 80 (431)
+|+|++||| ++|+++.+.+.+++...|++|+.||||++||+++++++++++++ .++++.+|.+|||++|+|++++|
T Consensus 12 T~~k~~l~d-~~g~i~~~~~~~~~~~~p~~g~~e~d~~~~~~~i~~~i~~~~~~---~~~~~~~i~~Igis~~~~~~~~v 87 (495)
T 2dpn_A 12 TSSRAILFT-LEGRPVAVAKREFRQLYPKPGWVEHDPLEIWETTLWAAREVLRR---AGAEAGEVLALGITNQRETTLLW 87 (495)
T ss_dssp SEEEEEEEC-TTSCEEEEEEEECCEECSSTTCCEECHHHHHHHHHHHHHHHHHH---TTCCGGGCCEEEEEECSSCBEEE
T ss_pred cceEEEEEC-CCCCEEEEEEEeeceecCCCCcEeeCHHHHHHHHHHHHHHHHHh---cCCCcccEEEEEEeCCCccEEEE
Confidence 589999999 59999999999999888999999999999999999999998765 34556789999999999999999
Q ss_pred eCCCCccccccceecCcccHHHHHHHHhhccChhHHHhHhCCCCCccchHHHHHHHHhcchHHHHhhhcCcccccChhHH
Q psy1586 81 DSTTGKPLYNAIVWSDVRTKSIVDTYASKIKNTTFLTTICGLPISTYFSAVKLNWLMDNVDEVKNAIKDNKCLFGTVDSW 160 (431)
Q Consensus 81 d~~~g~pl~~~i~w~D~R~~~~~~~l~~~~~~~~~~~~~tG~~~~~~~~~~kl~wl~~~~p~~~~~~~~~~~~~~~~~d~ 160 (431)
|+++|+|++|+|+|+|.|+.++++++.+. +..+.++++||+++++.++++||+||++|+|++|++++.+..+|++++||
T Consensus 88 D~~~G~~l~~~i~w~D~R~~~~~~~l~~~-~~~~~~~~~tG~~~~~~~~~~kl~wl~~~~p~~~~~~~~~~~~~~~~~d~ 166 (495)
T 2dpn_A 88 DRKTGKPLHNAIVWQDRRTTPLCEALRAK-GLEPLFRERTGLLFDPYFSGTKLVWLLENVPGLKARAEGGGVAFGTVDTW 166 (495)
T ss_dssp ETTTCCBSSCEECTTCCTTHHHHHHHHHT-TCHHHHHHHTSCCSCTTSHHHHHHHHHHHSSSHHHHHHHTCEEEECHHHH
T ss_pred ECCCCcCCccceeecccChHHHHHHHHhc-cchhHHHHHhCCCCCchhHHHHHHHHHHcCHHHHHHHhcCCcEEECHHHH
Confidence 98449999999999999999999999876 33467999999999999999999999999999999986444458999999
Q ss_pred HHHHhcC--CCCCcceeeccchhcccccccccCCCCcHHHHhhcCCCCCCCCccccCCccccccc---CCCCCCCcEEEe
Q psy1586 161 LIWNLTG--GVDGGLHITDVTNASRTLLMNLRTLQWEPQLLKFFNIPSQILPQIRSSSEIYGCLK---DGPLQGVPISGI 235 (431)
Q Consensus 161 l~~~LTG--~~~~~~~~~d~s~As~tgl~d~~~~~W~~~~l~~~gi~~~~lP~i~~~g~~~G~~~---~gl~~g~pV~~g 235 (431)
|.|+||| + +++|+|+||+|+|||+++++|++++|+.+||+.++||+|+++++++|++. +| +|+||++|
T Consensus 167 l~~~LTG~~~-----~~~d~s~As~t~l~d~~~~~W~~~ll~~~gi~~~~lP~i~~~~~~~G~~~~~~~G--~g~pV~~g 239 (495)
T 2dpn_A 167 LIWNLTGGKV-----HATDPTNASRTLLFNLHTLAWDPELLEALGIPAALLPEVRPSDGDFGETLPELLG--APVPIRGV 239 (495)
T ss_dssp HHHHHTTTSC-----CEECHHHHTTSSSEETTTTEECHHHHHHTTCCSTTCCEECCTTSCCCBCCHHHHS--SCCBEEEE
T ss_pred HHHHhcCCCe-----EEEehHHhHhhcCccCccCCcCHHHHHHcCCCHHHCCCccCCCCeeEeccHHHcC--CCCeEEEE
Confidence 9999999 7 99999999999999999999999999999999999999999999999984 46 89999999
Q ss_pred cCchHHhHHhcccCCCCcEEEEecccceeccccCCccccCCCCceeEEeeecCCCCCceEEEcccccchhhHHHHHHHHc
Q psy1586 236 LGDQQSALVGQSCLQAGQAKNTYGTGCFLLYNTGTAIVHSSQGLLTTVAYQFGARAPITYALEGSIAVAGQTFKWLRDNL 315 (431)
Q Consensus 236 ~~D~~aa~~g~g~~~~g~~~~~~GTs~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~w~~~~~ 315 (431)
++|++|+++|+|++++|++++++|||+++.+.++..+.....+.+..++|..+ .++.|.++++++++|.+++|+++ +
T Consensus 240 ~~D~~aa~~g~g~~~~g~~~~s~GTs~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~~~g~~~~w~~~-~ 316 (495)
T 2dpn_A 240 LGDQQAALFGQAALGGGEGKCTYGTGAFLLLNTGKRPVLSEKGLLATVAWSLG--GRATYALEGSLFVAGAAVGWLKE-V 316 (495)
T ss_dssp EEHHHHHHHHTTCCSTTCEEEEESSSEEEEEECTTSCCCCSSSCEEEEEEEET--TEEEEEEEEEESCSHHHHHHHHH-T
T ss_pred CcHHHHHHHhCCCCCCCcEEEEccHhhhhhhhcCCccccCCCCceEEEEEEcC--CCCEEEEechHHhHHHHHHHHHH-c
Confidence 99999999999999999999999999998887754444445567776666542 13489999999999999999999 8
Q ss_pred CCCCCHHHHHHHHHhcCCCCCeEEEeCCCCCCCCCCCCCCceeEecCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhcC
Q psy1586 316 NIIADLNEIESLVQKSSSHTDVVFVPAFSGLYAPYWQRDARSIICGLTDETSKVDIVKAALEAVCFQTRDILEAMKEDCG 395 (431)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~l~~~P~~~G~r~p~~~~~~~g~~~gl~~~~~~~~~~rA~~Egia~~~r~~~~~l~~~~g 395 (431)
+...+|+++++++++++++++++|+|||.|+|+|+||+++||+|+|++..|+++|++||++||++|.+|.+++.|++..|
T Consensus 317 ~~~~~~~~l~~~a~~~~~~~gl~~~P~~~G~r~P~~d~~arg~~~Gl~~~~~~~~~~rAvlEgia~~~~~~~~~l~~~~g 396 (495)
T 2dpn_A 317 GLIRESAEVEALAASVEDTGDVYFVPAFTGLGAPYWDPYARGTLLGLTRGTSRAHLARAALEGVAFQVRDVVLAMEEEAG 396 (495)
T ss_dssp TSSSSTTTHHHHHHTCSCCSSCEEECCTTCBCTTTCBTTCCEEEEEECTTCCHHHHHHHHHHHHHHHHHHHHHHHHTTTS
T ss_pred CCccCHHHHHHHHhhCCCCCcEEEecCCCCCCCCCCCCCCceEEEecCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 76567899999999888889999999999999999999999999999999999999999999999999999999987668
Q ss_pred CCCceEEEEcCCccChHHHHHHhhhcCCceEecCC
Q psy1586 396 VALEKLLVDGGMTANKYLMQLQADLTGTPVSSSPI 430 (431)
Q Consensus 396 ~~~~~i~~~GG~~~s~~~~qi~Advlg~pv~~~~~ 430 (431)
.++++|+++||++||++|+||+||+||+||++++.
T Consensus 397 ~~~~~i~~~GG~a~n~~~~q~~Adv~g~pV~~~~~ 431 (495)
T 2dpn_A 397 VRLKVLKADGGMAQNRLFLKIQADLLGVPVAVPEV 431 (495)
T ss_dssp CCCCCEEEESGGGGCHHHHHHHHHHHTSCEEEESC
T ss_pred CCCcEEEEecccccCHHHHHHHHHHhCCeeEecCC
Confidence 88899999999999999999999999999998753
No 10
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*
Probab=100.00 E-value=1.2e-81 Score=644.30 Aligned_cols=421 Identities=42% Similarity=0.723 Sum_probs=375.2
Q ss_pred CCcEEEEEeCCCCeEEEEEEeecceecCCCCceeeCHHHHHHHHHHHHHHHHHhhhhcCCCCCCeeEEEEecccceEEEe
Q psy1586 1 MSKSTIVFAASTSELLTYHKVELETLTPKEGWVEQDPMVILHLVEECIEKCVGYLVDLDINPNDIVAIGITNQRETTIVW 80 (431)
Q Consensus 1 ~s~K~~l~d~~~g~~l~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~I~~I~is~~~~~~v~~ 80 (431)
+|+|++||| ++|+++++.+.+++...|++||.||||++||+++++++++++++.. .++++.+|.+||||+|+|++++|
T Consensus 14 T~~k~~l~d-~~g~i~~~~~~~~~~~~~~~g~~e~d~~~~~~~i~~~i~~~~~~~~-~~~~~~~i~~Igis~~~~~~~~~ 91 (503)
T 2w40_A 14 QSTKVFFYD-EELNIVHSNNLNHEQKCLKPGWYEHDPIEIMTNLYNLMNEGIKVLK-DKYTSVIIKCIGITNQRETVIIW 91 (503)
T ss_dssp SEEEEEEEE-TTCCEEEEEEEECCCBCCSTTCCEECHHHHHHHHHHHHHHHHHHHH-HHSSSCEEEEEEEEECSSCEEEE
T ss_pred cceEEEEEC-CCCCEEEEEEEeeeeecCCCCcEEECHHHHHHHHHHHHHHHHHHhh-cCCCccceEEEEEcCCcceEEEE
Confidence 589999999 5999999999999988899999999999999999999999876520 02345789999999999999999
Q ss_pred eCCCCccccccceecCcccHHHHHHHHhhccChhHHHhHhCCCCCccchHHHHHHHHhcchHHHHhhhcCcccccChhHH
Q psy1586 81 DSTTGKPLYNAIVWSDVRTKSIVDTYASKIKNTTFLTTICGLPISTYFSAVKLNWLMDNVDEVKNAIKDNKCLFGTVDSW 160 (431)
Q Consensus 81 d~~~g~pl~~~i~w~D~R~~~~~~~l~~~~~~~~~~~~~tG~~~~~~~~~~kl~wl~~~~p~~~~~~~~~~~~~~~~~d~ 160 (431)
|+++|+|++|+|+|+|.|+.++++++.+. +..+.++++||+++++.++++||+|+++|+|++|++++.+..+|++++||
T Consensus 92 D~~~G~~l~~~i~w~D~r~~~~~~~l~~~-~~~~~~~~~tG~~~~~~~~~~kl~wl~~~~p~~~~~~~~~~~~~~~~~d~ 170 (503)
T 2w40_A 92 DRITGKPLYNAIVWLDTRVEELVTEFSAK-YNNNDIQKKTGTYFNTYFSAFKILWLIQNNPEIKQKIDDGTAVIGNINTW 170 (503)
T ss_dssp ETTTCCBSSCEECTTCCTTHHHHHHHHHH-SCHHHHHHHHSSCCCSSSHHHHHHHHHHHCHHHHHHHHTTCEEEEEHHHH
T ss_pred ECCCCcCCccceeecccCcHHHHHHHHhc-cchHHHHHHhCCCCCcccHHHHHHHHHHhChHHHHHHhcCCeEEECHHHH
Confidence 99449999999999999999999999886 33467999999999999999999999999999999986444559999999
Q ss_pred HHHHhcC-CCCCcceeeccchhcccccccccCCCCcHHHHhhcCCC-CCCCCccccCCcccccccCC-CCC--CCcEEEe
Q psy1586 161 LIWNLTG-GVDGGLHITDVTNASRTLLMNLRTLQWEPQLLKFFNIP-SQILPQIRSSSEIYGCLKDG-PLQ--GVPISGI 235 (431)
Q Consensus 161 l~~~LTG-~~~~~~~~~d~s~As~tgl~d~~~~~W~~~~l~~~gi~-~~~lP~i~~~g~~~G~~~~g-l~~--g~pV~~g 235 (431)
|.|+||| + .++|+|+||+|++||+++++|++++|+.+||+ .++||+|+++++++|++... +.+ |+||++|
T Consensus 171 l~~~LTG~~-----~~~d~s~As~t~l~d~~~~~W~~~ll~~~gi~~~~~lP~i~~~~~~~G~~~~~~~g~~~g~pV~~g 245 (503)
T 2w40_A 171 LIFNLTKGN-----CYTDVTNASRTLLMDINTLQWDEKMCKIFNITNMSVLPEIKSNCSNFGLVKSEHVPDYLNIPITGC 245 (503)
T ss_dssp HHHHHHTSC-----CEEEHHHHTTTTCBCTTTCSBCHHHHHHTTCCCGGGSCEEECSEEEEEECCCTTSGGGTTCEEEEE
T ss_pred HHHHHcCCC-----ccccHHHhhhhcCccCCCCccCHHHHHHcCCChHHHCCCccCCcCceeeccHHHcCCCCCceEEEE
Confidence 9999999 6 99999999999999999999999999999999 99999999999999999532 115 9999999
Q ss_pred cCchHHhHHhcccCCCCcEEEEecccceeccccCCccccCCCCceeEEeeecCCCCCceEEEcccccchhhHHHHHHHHc
Q psy1586 236 LGDQQSALVGQSCLQAGQAKNTYGTGCFLLYNTGTAIVHSSQGLLTTVAYQFGARAPITYALEGSIAVAGQTFKWLRDNL 315 (431)
Q Consensus 236 ~~D~~aa~~g~g~~~~g~~~~~~GTs~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~w~~~~~ 315 (431)
++|++|+++|+|++++|++++++|||+++.+.++..+.....+.+..++|..+...++.|.++++++++|.+++|+++ +
T Consensus 246 ~~D~~aa~~g~g~~~~g~~~~s~GTs~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~g~~~~w~~~-~ 324 (503)
T 2w40_A 246 IGDQQSACIGQAIFDEGEAKCTYGTGVFLLINTGEKVVYSTCGLITTICYKFNDNDKPKYALEGSIGTAGSGVSWLLK-N 324 (503)
T ss_dssp EEHHHHHHHHTTCCSTTCEEEEESSSEEEEEECTTSCCCCSSSCEEEEEECCSTTSCCEEEEEEEESCSHHHHHHHHH-T
T ss_pred CchHHHHHHhCCCCCCCcEEEEechhheeeeecCCccccCCCCceeEEEeecCCCCCceEEEechhhhhHhHHHHHHH-h
Confidence 999999999999999999999999999988877543444445666666654210002389999999999999999999 8
Q ss_pred CCCCCHHHHHHHHHhcCCCCCeEEEeCCCCCCCCCCCCCCceeEecCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhcC
Q psy1586 316 NIIADLNEIESLVQKSSSHTDVVFVPAFSGLYAPYWQRDARSIICGLTDETSKVDIVKAALEAVCFQTRDILEAMKEDCG 395 (431)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~l~~~P~~~G~r~p~~~~~~~g~~~gl~~~~~~~~~~rA~~Egia~~~r~~~~~l~~~~g 395 (431)
+...+|++++++++++++++|++|+|||.|+|+|+||+++||+|+|++..|+++|++||++||++|.+|.+++.|++..|
T Consensus 325 ~~~~~~~~l~~~a~~~~~~~gl~~~P~~~G~r~P~~d~~arg~~~Gl~~~~~~~~l~rAvlEgia~~~~~~~~~l~~~~g 404 (503)
T 2w40_A 325 KLIDDPSEASDIMEKCENTTGVIFVPAFSGLYAPRWRSDARASIYGMTFNTERSHIVRALLEGIAFQLNEIVDSLTSDMG 404 (503)
T ss_dssp TSSSCGGGHHHHHHHCCSCTTCEEECCTTCBCTTTCBTTCCEEEEEECTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCcCCHHHHHHHHhhCCCCCCEEEecCCCCCCCCCCCCCCcEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 76567999999999988889999999999999999999999999999999999999999999999999999999987668
Q ss_pred CCC-ceEEEEcCCccChHHHHHHhhhcCCceEecCC
Q psy1586 396 VAL-EKLLVDGGMTANKYLMQLQADLTGTPVSSSPI 430 (431)
Q Consensus 396 ~~~-~~i~~~GG~~~s~~~~qi~Advlg~pv~~~~~ 430 (431)
.++ ++|+++||++||++|+|++||+||+||++++.
T Consensus 405 ~~~~~~i~~~GG~a~s~~~~Q~~Adv~g~pV~~~~~ 440 (503)
T 2w40_A 405 IEMLHVLRCDGGMTKNKPFMQFNSDIINTKIEVSKY 440 (503)
T ss_dssp CSCCSCEEEESGGGGCHHHHHHHHHHHTSCEEEESC
T ss_pred CCccceEEEeCccccCHHHHHHHHHHHCCeEEecCC
Confidence 888 99999999999999999999999999997753
No 11
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}
Probab=100.00 E-value=1.3e-81 Score=643.97 Aligned_cols=417 Identities=50% Similarity=0.845 Sum_probs=376.6
Q ss_pred CCcEEEEEeCCCCeEEEEEEeecceecCCCCceeeCHHHHHHHHHHHHHHHHHhhhhcCCCCCCeeEEEEecccceEEEe
Q psy1586 1 MSKSTIVFAASTSELLTYHKVELETLTPKEGWVEQDPMVILHLVEECIEKCVGYLVDLDINPNDIVAIGITNQRETTIVW 80 (431)
Q Consensus 1 ~s~K~~l~d~~~g~~l~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~I~~I~is~~~~~~v~~ 80 (431)
+|+|++||| .+|+++++.+.+++...|++||.||||++||+++++++++++++ .++++.+|.+|||++|+|++|+|
T Consensus 12 ts~k~~l~d-~~G~i~~~~~~~~~~~~p~~g~~e~d~~~~~~~i~~~i~~~~~~---~~~~~~~i~~Igis~~g~~~v~v 87 (504)
T 2d4w_A 12 TSSRAIVFD-HSGEIYSTGQLEHDQIFPRAGWVEHNPEQIWNNVREVVGLALTR---GNLTHEDIAAVGITNQRETAVVW 87 (504)
T ss_dssp SEEEEEEEC-TTSCEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHH---TTCCGGGEEEEEEEECSSCBEEE
T ss_pred cceEEEEEC-CCCCEEEEEEEecceecCCCCceeECHHHHHHHHHHHHHHHHHH---cCCCcccEEEEEEeCCCCeEEEE
Confidence 589999999 59999999999999888999999999999999999999998765 24556789999999999999999
Q ss_pred eCCCCccccccceecCcccHHHHHHHHhhccChhHHHhHhCCCCCccchHHHHHHHHhcchHHHHhhhcCcccccChhHH
Q psy1586 81 DSTTGKPLYNAIVWSDVRTKSIVDTYASKIKNTTFLTTICGLPISTYFSAVKLNWLMDNVDEVKNAIKDNKCLFGTVDSW 160 (431)
Q Consensus 81 d~~~g~pl~~~i~w~D~R~~~~~~~l~~~~~~~~~~~~~tG~~~~~~~~~~kl~wl~~~~p~~~~~~~~~~~~~~~~~d~ 160 (431)
|+++|+|++|+|.|+|.|+.++++++.+..+ .+.++++||+++++.++++||+|+++|+|++|++++.+..+|++++||
T Consensus 88 D~~~G~~l~~~i~w~D~R~~~~~~~l~~~~~-~~~~~~~tG~~~~~~~~~~kl~wl~~~~p~~~~~~~~~~~~~~~~~d~ 166 (504)
T 2d4w_A 88 DKTTGKPVYNAIVWQDTRTQKIVDELGGDEG-AEKYKSIVGLPLATYFSGPKIKWILDNVEGAREKAEKGDLLFGNTDTW 166 (504)
T ss_dssp ETTTCCBSSCEECTTCCTTHHHHHHHHCSSC-GGGGHHHHSCCSCTTSHHHHHHHHHHHSTTHHHHHHHTCEEEECHHHH
T ss_pred ECCCCCCccccceecccChHHHHHHHHhhcc-hHHHHHHhCCCCCchhHHHHHHHHHHcChhHHHHHhcCCeEEecHHHH
Confidence 9844999999999999999999999987554 477999999999999999999999999999999986444559999999
Q ss_pred HHHHhcCCCCCcc---eeeccchhcccccccccCCCCcHHHHhhcCCCCCCCCccccCCcccccccC-C-CCCCCcEEEe
Q psy1586 161 LIWNLTGGVDGGL---HITDVTNASRTLLMNLRTLQWEPQLLKFFNIPSQILPQIRSSSEIYGCLKD-G-PLQGVPISGI 235 (431)
Q Consensus 161 l~~~LTG~~~~~~---~~~d~s~As~tgl~d~~~~~W~~~~l~~~gi~~~~lP~i~~~g~~~G~~~~-g-l~~g~pV~~g 235 (431)
|.|+|||. .. .++|+|+||+|+|||+++++|++++|+.+||+.++||+|+++++++|++.. . +.+ +||++|
T Consensus 167 l~~~LTG~---~~~~~~~~d~s~As~t~l~d~~~~~W~~~ll~~~gi~~~~lP~i~~~~~~~G~~~~~~~~G~-~pV~~g 242 (504)
T 2d4w_A 167 VLWNMTGG---TEGGVHVTDVTNASRTMLMDLDTLSWREDIAADMGIPLSMLPDIRSSSEVYGHGRPRGLVPG-VPIAGI 242 (504)
T ss_dssp HHHHHTTT---TTTCCCEEEHHHHTTTTCEETTTTEECHHHHHHTTCCGGGSCEEECSEEEEEECCTTSSSTT-CEEEEE
T ss_pred HHHHhcCC---CcCCceeeehhhhhhhcCccCCCCccCHHHHHHhCCCHHHCCCccCCccceeccchHHhCCC-CeEEEE
Confidence 99999994 13 899999999999999999999999999999999999999999999999853 1 225 999999
Q ss_pred cCchHHhHHhcccCCCCcEEEEecccceeccccCCccccCCCCceeEEeeecCCCCCc---eEEEcccccchhhHHHHHH
Q psy1586 236 LGDQQSALVGQSCLQAGQAKNTYGTGCFLLYNTGTAIVHSSQGLLTTVAYQFGARAPI---TYALEGSIAVAGQTFKWLR 312 (431)
Q Consensus 236 ~~D~~aa~~g~g~~~~g~~~~~~GTs~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~G~~~~w~~ 312 (431)
++|++|+++|+|++++|++++++|||+++.+.++..+.....+.++.++|. .++ .|.++++++++|.+++|++
T Consensus 243 ~~D~~aa~~g~g~~~~g~~~~s~GTs~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~g~~~~~G~~~~W~~ 318 (504)
T 2d4w_A 243 LGDQQAATFGQACFEVGQAKNTYGTGNFLLLNTGTEKVMSKNGLLTTVCYK----IGDAPAVYALEGSIAVTGSLVQWLR 318 (504)
T ss_dssp EEHHHHHHHHTTCCSTTEEEEEESSSEEEEEECTTSCCCCSSSCEEEEEEC----CTTSCCEEEEEEEESCSHHHHHHHH
T ss_pred CCcHHHHHhhCCCCCCCcEEEEcchhheeeeecCCccccCCCCcEEEEEEE----cCCCCceEEEcchhhhHHHHHHHHH
Confidence 999999999999999999999999999988877544444455677766654 344 8999999999999999999
Q ss_pred HHcCCCCCHHHHHHHHHhcCCCCCeEEEeCCCCCCCCCCCCCCceeEecCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHH
Q psy1586 313 DNLNIIADLNEIESLVQKSSSHTDVVFVPAFSGLYAPYWQRDARSIICGLTDETSKVDIVKAALEAVCFQTRDILEAMKE 392 (431)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~P~~~G~r~p~~~~~~~g~~~gl~~~~~~~~~~rA~~Egia~~~r~~~~~l~~ 392 (431)
+.++...+|++++++++++++++|++|+|||.|+|+|+||+++||.|+|++..|+++|++||++||++|.+|.+++.|++
T Consensus 319 ~~~~~~~~~~~l~~~a~~~~~~~gl~~~P~~~G~r~P~~d~~arg~~~Gl~~~~~~~~l~rAvlEgia~~~~~~~~~l~~ 398 (504)
T 2d4w_A 319 DNLGMFEDAPDVEWLAGKVQDNGGAYFVPAFSGLFAPYWRPDARGALVGLTRYVNRNHIARAALEATAFQSREVVDAMNA 398 (504)
T ss_dssp HTTCTTTTCSCTHHHHTTSSSCTTCEEECTTCCCSTTTCCCCSCEEEEEECSSCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhCCCCCHHHHHHHHhhCCCCCCEEEecCCCCCCCCCCCCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 98875557888999998888889999999999999999999999999999999999999999999999999999999987
Q ss_pred hcCCCCceEEEEcCCccChHHHHHHhhhcCCceEecCC
Q psy1586 393 DCGVALEKLLVDGGMTANKYLMQLQADLTGTPVSSSPI 430 (431)
Q Consensus 393 ~~g~~~~~i~~~GG~~~s~~~~qi~Advlg~pv~~~~~ 430 (431)
..|.++++|+++||++||++|+||+||+||+||++++.
T Consensus 399 ~~g~~~~~i~~~GG~a~s~~~~Qi~Adv~g~pV~~~~~ 436 (504)
T 2d4w_A 399 DSGVDLTELRVDGGMVANELLMQFQADQLGVDVVRPKV 436 (504)
T ss_dssp HHSCCCCEEEEESGGGGCHHHHHHHHHHHTSCEEEESC
T ss_pred hcCCCcceEEEeCCcccCHHHHHHHHHHhCCeEEeCCC
Confidence 67888999999999999999999999999999998754
No 12
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=100.00 E-value=2.3e-81 Score=641.41 Aligned_cols=411 Identities=45% Similarity=0.778 Sum_probs=375.3
Q ss_pred CCcEEEEEeCCCCeEEEEEEeecceecCCCCceeeCHHHHHHHHHHHHHHHHHhhhhcCCCCCCeeEEEEecccceEEEe
Q psy1586 1 MSKSTIVFAASTSELLTYHKVELETLTPKEGWVEQDPMVILHLVEECIEKCVGYLVDLDINPNDIVAIGITNQRETTIVW 80 (431)
Q Consensus 1 ~s~K~~l~d~~~g~~l~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~I~~I~is~~~~~~v~~ 80 (431)
+|+|++||| .+|+++++.+.+++...|++||.||||++||+++++++++++++. ++++.+|.+||||+|+|++|+|
T Consensus 13 t~~k~~l~d-~~g~~~~~~~~~~~~~~p~~g~~e~d~~~~~~~~~~~i~~~~~~~---~~~~~~i~~Igis~~~~~~v~~ 88 (497)
T 2zf5_O 13 TSARAIIFD-RESNIHGIGQYEFPQHYPRPGWVEHNPEEIWDAQLRAIKDAIQSA---RIEPNQIAAIGVTNQRETTLVW 88 (497)
T ss_dssp SEEEEEEEC-TTCCEEEEEEEECCCBCCSTTCCEECHHHHHHHHHHHHHHHHHHH---TCCGGGEEEEEEEECSSCEEEE
T ss_pred chhEEEEEC-CCCCEEEEEEeccceecCCCCcEEECHHHHHHHHHHHHHHHHHhc---CCCcccEEEEEEecCCCcEEEE
Confidence 579999999 599999999999998889999999999999999999999997753 4556789999999999999999
Q ss_pred eCCCCccccccceecCcccHHHHHHHHhhccChhHHHhHhCCCCCccchHHHHHHHHhcchHHHHhhhcCcccccChhHH
Q psy1586 81 DSTTGKPLYNAIVWSDVRTKSIVDTYASKIKNTTFLTTICGLPISTYFSAVKLNWLMDNVDEVKNAIKDNKCLFGTVDSW 160 (431)
Q Consensus 81 d~~~g~pl~~~i~w~D~R~~~~~~~l~~~~~~~~~~~~~tG~~~~~~~~~~kl~wl~~~~p~~~~~~~~~~~~~~~~~d~ 160 (431)
|+ +|+|++|+|+|+|.|+.++++++.+. . .+.++++||.++++.++++||+|+++|+|++|++++.+..+|++++||
T Consensus 89 D~-~G~~l~~~i~w~D~R~~~~~~~l~~~-~-~~~~~~~tG~~~~~~~~~~kl~wl~~~~p~~~~~~~~~~~~~~~~~d~ 165 (497)
T 2zf5_O 89 DK-DGKPLYNAIVWQCRRTAEMVEEIKRE-Y-GTMIKEKTGLVPDAYFSASKLKWLLDNVPGLREKAEKGEVMFGTVDTF 165 (497)
T ss_dssp CT-TCCBSSCEECTTCCTTHHHHHHHHHH-H-HHHHHHHHSSCCCTTSHHHHHHHHHHHSTTHHHHHHTTCCEEEEHHHH
T ss_pred CC-CCCCcccceeecccCcHHHHHHHHhh-h-HHHHHHHhCCCCCchhHHHHHHHHHHcCHHHHHHHhcCCCEEEcHHHH
Confidence 99 79999999999999999999999876 3 367999999999999999999999999999999986444558899999
Q ss_pred HHHHhcCCCCCcceeeccchhcccccccccCCCCcHHHHhhcCCCCCCCCccccCCccccccc---CCCCCCCcEEEecC
Q psy1586 161 LIWNLTGGVDGGLHITDVTNASRTLLMNLRTLQWEPQLLKFFNIPSQILPQIRSSSEIYGCLK---DGPLQGVPISGILG 237 (431)
Q Consensus 161 l~~~LTG~~~~~~~~~d~s~As~tgl~d~~~~~W~~~~l~~~gi~~~~lP~i~~~g~~~G~~~---~gl~~g~pV~~g~~ 237 (431)
|.|+|||+ .++|+|+||+|++||+++++|++++|+.+||+.++||+|+++++++|++. +| +|+||++|++
T Consensus 166 l~~~LTG~-----~~td~s~As~t~l~d~~~~~W~~~ll~~~gi~~~~lP~i~~~~~~~G~~~~~~~g--~g~pV~~g~~ 238 (497)
T 2zf5_O 166 LIYRLTGE-----HVTDYSNASRTMLFNIKKLDWDDELLELFDIPESVLPEVRESSEVYGYTKKELLG--AEIPVSGDAG 238 (497)
T ss_dssp HHHHHHSC-----CEEEHHHHTTSSSEETTTTEECHHHHHHTTCCGGGCCEEECSEEEEEECCHHHHS--SCCEEEEEEE
T ss_pred HHHHHhCC-----eeeeHHHhhhhcCccCCCCCcCHHHHHHcCcCHHHCCCcCCCCCeeeecCHHHcC--CCCeEEEEcc
Confidence 99999998 99999999999999999999999999999999999999999999999984 36 8999999999
Q ss_pred chHHhHHhcccCCCCcEEEEecccceeccccCCccccCCCCceeEEeeecCCCCCceEEEcccccchhhHHHHHHHHcCC
Q psy1586 238 DQQSALVGQSCLQAGQAKNTYGTGCFLLYNTGTAIVHSSQGLLTTVAYQFGARAPITYALEGSIAVAGQTFKWLRDNLNI 317 (431)
Q Consensus 238 D~~aa~~g~g~~~~g~~~~~~GTs~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~w~~~~~~~ 317 (431)
|++|+++|+|++++|++++++|||+++.+.+++ +..+..+.+..++|..+ .++.|.++++++++|.+++|+++.++.
T Consensus 239 D~~aa~~g~g~~~~g~~~~s~GTs~~~~~~~~~-~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~~~G~~~~w~~~~~~~ 315 (497)
T 2zf5_O 239 DQQAALFGQAAFEAGMVKATYGTGSFILVNTDK-MVLYSDNLLTTIAWGLN--GRVSYALEGSIFVTGAAVQWLRDGIKI 315 (497)
T ss_dssp HHHHHHHHTTCCSTTCEEEEESSSEEEEEEEET-CCCCCTTSEEEEEEEET--TEEEEEEEEEESCSHHHHHHHHHTSCC
T ss_pred HHHHHHHhCCCCCCCcEEEEcchhheeeEECCC-CccCCCCcEEEEEEEcC--CCCEEEEechhhhHHHHHHHHHHHhCC
Confidence 999999999999999999999999998877765 44445567776666542 134899999999999999999998876
Q ss_pred CCCHHHHHHHHHhcCCCCCeEEEeCCCCCCCCCCCCCCceeEecCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhcCCC
Q psy1586 318 IADLNEIESLVQKSSSHTDVVFVPAFSGLYAPYWQRDARSIICGLTDETSKVDIVKAALEAVCFQTRDILEAMKEDCGVA 397 (431)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~l~~~P~~~G~r~p~~~~~~~g~~~gl~~~~~~~~~~rA~~Egia~~~r~~~~~l~~~~g~~ 397 (431)
..+|++++++++++|++++++|+|||.|+|+|+||+++||.|+|++..|+++|++||++||++|.+|.+++.|++ .+ +
T Consensus 316 ~~~~~~l~~~a~~~~~~~gl~~~P~~~G~r~P~~d~~arg~~~Gl~~~~~~~~l~rAvlEgia~~~~~~l~~l~~-~~-~ 393 (497)
T 2zf5_O 316 IKHASETEELATKLESNEGVYFVPAFVGLGAPYWDQFARGIIIGITRGTGREHLARATLEAIAYLTRDVVDEMEK-LV-Q 393 (497)
T ss_dssp CSCGGGHHHHHTTSSSCTTCEEECCTTCBCTTTCBTTCCEEEEEECTTCCHHHHHHHHHHHHHHHHHHHHHHHTT-TS-C
T ss_pred CCcHHHHHHHHhhCCCCCceEEecCcCCCCCCCCCCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHh-cC-C
Confidence 567899999998888889999999999999999999999999999999999999999999999999999999976 35 8
Q ss_pred CceEEEEcCCccChHHHHHHhhhcCCceEecCC
Q psy1586 398 LEKLLVDGGMTANKYLMQLQADLTGTPVSSSPI 430 (431)
Q Consensus 398 ~~~i~~~GG~~~s~~~~qi~Advlg~pv~~~~~ 430 (431)
+++|+++||++||++|+||+||+||+||++++.
T Consensus 394 ~~~i~~~GG~a~s~~~~Qi~Adv~g~pV~~~~~ 426 (497)
T 2zf5_O 394 IKELRVDGGATANDFLMQFQADILNRKVIRPVV 426 (497)
T ss_dssp CCCEEEESGGGGCHHHHHHHHHHHTSCEEEESC
T ss_pred cceEEEeCccccCHHHHHHHHhhcCCeEEEcCC
Confidence 899999999999999999999999999998754
No 13
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=100.00 E-value=1.2e-80 Score=634.42 Aligned_cols=403 Identities=21% Similarity=0.347 Sum_probs=357.4
Q ss_pred CCcEEEEEeCCCCeEEEEEEeecceecCCCCceeeCHHHHHHHHHHHHHHHHHhhhhcCCCCCCeeEEEEecccceEEEe
Q psy1586 1 MSKSTIVFAASTSELLTYHKVELETLTPKEGWVEQDPMVILHLVEECIEKCVGYLVDLDINPNDIVAIGITNQRETTIVW 80 (431)
Q Consensus 1 ~s~K~~l~d~~~g~~l~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~I~~I~is~~~~~~v~~ 80 (431)
+|+|++||| .+|++++..+.+++...|++||.||||++||++++++++++.++. .+.+|.+||||+|+|++|+|
T Consensus 10 t~~k~~l~d-~~g~~l~~~~~~~~~~~p~~g~~e~d~~~~~~~i~~~i~~~~~~~-----~~~~i~~Igis~~~~~~v~~ 83 (484)
T 2itm_A 10 SGVKVILLN-EQGEVVAAQTEKLTVSRPHPLWSEQDPEQWWQATDRAMKALGDQH-----SLQDVKALGIAGQMHGATLL 83 (484)
T ss_dssp SEEEEEEEC-TTSCEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHHS-----CCTTCCEEEEEECSSCBEEE
T ss_pred cccEEEEEC-CCCCEEEEEEeccccccCCCCCEeECHHHHHHHHHHHHHHHHHhC-----CccceEEEEEcCCcCcEEEE
Confidence 589999999 599999999999999899999999999999999999999987652 24689999999999999999
Q ss_pred eCCCCccccccceecCcccHHHHHHHHhhccChhHHHhHhCCCCCccchHHHHHHHHhcchHHHHhhhcCcccccChhHH
Q psy1586 81 DSTTGKPLYNAIVWSDVRTKSIVDTYASKIKNTTFLTTICGLPISTYFSAVKLNWLMDNVDEVKNAIKDNKCLFGTVDSW 160 (431)
Q Consensus 81 d~~~g~pl~~~i~w~D~R~~~~~~~l~~~~~~~~~~~~~tG~~~~~~~~~~kl~wl~~~~p~~~~~~~~~~~~~~~~~d~ 160 (431)
|+ +|+|++|+|.|+|.|+.++++++.+..+ .++++||+++++.++++||+|+++|+|++|+++ .+++.++||
T Consensus 84 D~-~G~~l~~~i~w~D~R~~~~~~~l~~~~~---~~~~~tG~~~~~~~~~~kl~wl~~~~P~~~~~~----~~~l~~~d~ 155 (484)
T 2itm_A 84 DA-QQRVLRPAILWNDGRCAQECTLLEARVP---QSRVITGNLMMPGFTAPKLLWVQRHEPEIFRQI----DKVLLPKDY 155 (484)
T ss_dssp CT-TCCBCSCEECTTCCTTHHHHHHHHHHCT---THHHHHSSCCCTTSHHHHHHHHHHHCHHHHTTC----CEEECHHHH
T ss_pred CC-CcCCCcccceecccCcHHHHHHHHHhHH---HHHHHhCCCCCcccHHHHHHHHHHhChHHHHHH----hheeCcHHH
Confidence 99 6999999999999999999999988753 356789999999999999999999999999987 478889999
Q ss_pred HHHHhcCCCCCcceeeccchhcccccccccCCCCcHHHHhhcCCCCCCCCccccCCcccccc------cCCCCCCCcEEE
Q psy1586 161 LIWNLTGGVDGGLHITDVTNASRTLLMNLRTLQWEPQLLKFFNIPSQILPQIRSSSEIYGCL------KDGPLQGVPISG 234 (431)
Q Consensus 161 l~~~LTG~~~~~~~~~d~s~As~tgl~d~~~~~W~~~~l~~~gi~~~~lP~i~~~g~~~G~~------~~gl~~g~pV~~ 234 (431)
|.|+|||+ .++|+|+||+|++||+++++|++++|+.+||+.++||+|+++++++|++ ++||+ |+||++
T Consensus 156 l~~~LTG~-----~~td~s~As~t~l~d~~~~~W~~~ll~~~gi~~~~lp~i~~~~~~~G~~~~~~a~~~Gl~-g~pV~~ 229 (484)
T 2itm_A 156 LRLRMTGE-----FASDMSDAAGTMWLDVAKRDWSDVMLQACDLSRDQMPALYEGSEITGALLPEVAKAWGMA-TVPVVA 229 (484)
T ss_dssp HHHHHHSC-----CEEEHHHHHTTTCEETTTTEECHHHHHTTTCCGGGSCEEECTTSEEEECCHHHHHHHTSC-CCEEEC
T ss_pred HHHHHhCC-----ceeeHHHhhccccccCCCCCcCHHHHHHcCCCHHHCCCccCCcceeeccCHHHHHHhCCC-CCeEEE
Confidence 99999999 9999999999999999999999999999999999999999999999998 35999 999999
Q ss_pred ecCchHHhHHhcccCCCCcEEEEecccceeccccCCccccCCCCceeEEeeecCCCCCceEEEcccccchhhHHHHHHHH
Q psy1586 235 ILGDQQSALVGQSCLQAGQAKNTYGTGCFLLYNTGTAIVHSSQGLLTTVAYQFGARAPITYALEGSIAVAGQTFKWLRDN 314 (431)
Q Consensus 235 g~~D~~aa~~g~g~~~~g~~~~~~GTs~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~w~~~~ 314 (431)
|+||++|+++|+|++++|++++++|||+++...++.+......++ ..++ +..++.|.++++++++|.+++|+++.
T Consensus 230 g~~D~~aa~~g~g~~~~g~~~~s~GTs~~~~~~~~~~~~~~~~~~-~~~~----~~~~g~~~~~~~~~~~G~~~~W~~~~ 304 (484)
T 2itm_A 230 GGGDNAAGAVGVGMVDANQAMLSLGTSGVYFAVSEGFLSKPESAV-HSFC----HALPQRWHLMSVMLSAASCLDWAAKL 304 (484)
T ss_dssp CEEHHHHHHHHHTCCSTTCEEEEESSSEEEEEECSSCCCCCSSSC-EEEE----CSSTTCEEEEEEECCHHHHHHHHHHH
T ss_pred EchHHHHHHHhCCCCCCCcEEEEccchheeEEecCCCccCcccce-EEee----cccCCeeeeeehhhhHHHHHHHHHHh
Confidence 999999999999999999999999999877766554322222233 2333 23578999999999999999999998
Q ss_pred cCCCCCHHHHHHHHHhcC-CCCCeEEEeCCCCCCCCCCCCCCceeEecCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHh
Q psy1586 315 LNIIADLNEIESLVQKSS-SHTDVVFVPAFSGLYAPYWQRDARSIICGLTDETSKVDIVKAALEAVCFQTRDILEAMKED 393 (431)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~-~~~~l~~~P~~~G~r~p~~~~~~~g~~~gl~~~~~~~~~~rA~~Egia~~~r~~~~~l~~~ 393 (431)
++. .+|+++++++.+.+ ++++++|+|||.|+|+|+||+++||.|+|++.+|+++|++||++||++|.+|.+++.|++
T Consensus 305 ~~~-~~~~~~~~~a~~~~~~~~gl~~lP~~~G~r~P~~~~~a~g~~~Gl~~~~~~~~~~rAvlEgia~~~~~~~~~l~~- 382 (484)
T 2itm_A 305 TGL-SNVPALIAAAQQADESAEPVWFLPYLSGERTPHNNPQAKGVFFGLTHQHGPNELARAVLEGVGYALADGMDVVHA- 382 (484)
T ss_dssp TTC-CSHHHHHHHGGGCCTTSCCCEEEEEEC--------CCEEEEEEEEETTCCHHHHHHHHHHHHHHHHHHHHHHHHT-
T ss_pred cCc-ccHHHHHHHHhcCCCCCCCeEEeCCCCCCCCCCCCCCCceEEEcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH-
Confidence 863 47888888887765 899999999999999999999999999999999999999999999999999999999987
Q ss_pred cCCCCceEEEEcCCccChHHHHHHhhhcCCceEecCC
Q psy1586 394 CGVALEKLLVDGGMTANKYLMQLQADLTGTPVSSSPI 430 (431)
Q Consensus 394 ~g~~~~~i~~~GG~~~s~~~~qi~Advlg~pv~~~~~ 430 (431)
.|.++++|+++||++||++|+||+||+||+||++++.
T Consensus 383 ~g~~~~~i~~~GG~a~s~~~~Qi~Adv~g~pV~~~~~ 419 (484)
T 2itm_A 383 CGIKPQSVTLIGGGARSEYWRQMLADISGQQLDYRTG 419 (484)
T ss_dssp TTCCCSCEEEESGGGCCHHHHHHHHHHHCCCEEEESC
T ss_pred cCCCcceEEEEeccccCHHHHHHHHHHhCCeEEeCCC
Confidence 5888899999999999999999999999999998764
No 14
>3jvp_A Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, sugar kinase, crsytal structure, structural genomics, protein structure initiative; HET: 5RP; 2.31A {Bacillus halodurans} PDB: 3qdk_A*
Probab=100.00 E-value=8.5e-81 Score=646.46 Aligned_cols=410 Identities=19% Similarity=0.279 Sum_probs=363.1
Q ss_pred CCcEEEEEeCCCCeEEEEEEeecc-----eecCC------CCceeeCHHHHHHHHHHHHHHHHHhhhhcCCCCCCeeEEE
Q psy1586 1 MSKSTIVFAASTSELLTYHKVELE-----TLTPK------EGWVEQDPMVILHLVEECIEKCVGYLVDLDINPNDIVAIG 69 (431)
Q Consensus 1 ~s~K~~l~d~~~g~~l~~~~~~~~-----~~~~~------~g~~e~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~I~~I~ 69 (431)
+|+|++|||.++|+++++.+.+++ ...|+ +||+||||++||+++++++++++++. ++++.+|.+||
T Consensus 15 ts~Ka~l~d~~~G~i~~~~~~~~~~~~~~~~~p~~~~~~~~g~~eqdp~~~~~~~~~~i~~~l~~~---~~~~~~I~~Ig 91 (572)
T 3jvp_A 15 ESGRAVLIDLSNGQELADHVTPYRHGVIDQYLPNTNIKLGHEWALQHPLDYVEVLTTSVPAVMKES---GVDADDVIGIG 91 (572)
T ss_dssp SEEEEEEEETTTCCEEEEEEEECTTCCBSSBSTTSCCBCCTTCCEECHHHHHHHHTTHHHHHHHC------CCSCEEEEE
T ss_pred cceEEEEEECCCCeEEEEEEeccCCccccccCCccccCCCCCcEEECHHHHHHHHHHHHHHHHHHc---CCChhHEEEEE
Confidence 589999999339999999999998 56676 99999999999999999999998653 45678999999
Q ss_pred EecccceEEEeeCCCCccccc-----------cceecCcccHHHHHHHHhhccC-hhHHHhHhCCCCCccchHHHHHHHH
Q psy1586 70 ITNQRETTIVWDSTTGKPLYN-----------AIVWSDVRTKSIVDTYASKIKN-TTFLTTICGLPISTYFSAVKLNWLM 137 (431)
Q Consensus 70 is~~~~~~v~~d~~~g~pl~~-----------~i~w~D~R~~~~~~~l~~~~~~-~~~~~~~tG~~~~~~~~~~kl~wl~ 137 (431)
||+|++++|+||+ +|+|++| +|+|+|+|+.++++++.+.++. .+.++++||+++++.++++||+||+
T Consensus 92 is~q~~~~v~~D~-~G~pl~~~~~~~~~p~~~ai~W~D~R~~~~~~~l~~~~~~~~~~~~~~tG~~~~~~~~~~kl~wl~ 170 (572)
T 3jvp_A 92 VDFTACTMLPVDE-EGQPLCLLAQYKDNPHSWVKLWKHHAAQDKANAINEMAEKRGEAFLPRYGGKISSEWMIAKVWQIL 170 (572)
T ss_dssp EEECSSCEEEECT-TSCBGGGSSSTTSSGGGSEECTTCCTTHHHHHHHHHHHHHHTCTTGGGGTTCCCSSSHHHHHHHHH
T ss_pred EecCCCcEEEECC-CCCCCccCccccccccccceecCccchHHHHHHHHHhccccHHHHHHHhCCCCCchhHHHHHHHHH
Confidence 9999999999999 7999998 7999999999999999886431 2568899999999999999999999
Q ss_pred hcchHHHHhhhcCcccccChhHHHHHHhcCCCCCcceeeccchhcccccccccCCCC-cHHHHhhcC-----CCCCCC-C
Q psy1586 138 DNVDEVKNAIKDNKCLFGTVDSWLIWNLTGGVDGGLHITDVTNASRTLLMNLRTLQW-EPQLLKFFN-----IPSQIL-P 210 (431)
Q Consensus 138 ~~~p~~~~~~~~~~~~~~~~~d~l~~~LTG~~~~~~~~~d~s~As~tgl~d~~~~~W-~~~~l~~~g-----i~~~~l-P 210 (431)
+|+|++|+++ .+|++++|||.|+|||+ .++|+|+||+|+||| ++++| |+++|+.+| +++++| |
T Consensus 171 ~~~Pe~~~~~----~~~l~~~dyl~~~LTG~-----~~~d~s~As~t~l~d-~~~~W~~~ell~~~g~~l~~i~~~~L~p 240 (572)
T 3jvp_A 171 DEAEDVYNRT----DQFLEATDWIVSQMTGK-----IVKNSCTAGYKAIWH-KREGYPSNEFFKALDPRLEHLTTTKLRG 240 (572)
T ss_dssp HHHHHHHHHC----SEEEEHHHHHHHHHHSS-----CCEEHHHHHHHSCCB-TTTBSCCHHHHHTTCGGGTTSTTTTTCS
T ss_pred HhCHHHHHHh----heEecHHHHHHHHhcCC-----ceeehhhccccceeC-CCCCcCCHHHHHHhCcccccCCHhHCCC
Confidence 9999999987 47899999999999999 999999999999999 99999 999999998 455667 8
Q ss_pred ccccCCccccccc------CCCCCCCcEEEecCchHHhHHhcccCCCCcEEEEecccceeccccCCccccCCCCceeEEe
Q psy1586 211 QIRSSSEIYGCLK------DGPLQGVPISGILGDQQSALVGQSCLQAGQAKNTYGTGCFLLYNTGTAIVHSSQGLLTTVA 284 (431)
Q Consensus 211 ~i~~~g~~~G~~~------~gl~~g~pV~~g~~D~~aa~~g~g~~~~g~~~~~~GTs~~i~~~~~~~~~~~~~~~~~~~~ 284 (431)
+|+++++++|++. +||++|+||++|++|++|+++|+|++++|++++++|||+++.+++..... ..+....+
T Consensus 241 ~i~~~~~~~G~l~~~~A~~~GL~~g~pV~~g~~D~~aa~~g~g~~~~g~~~~~~GTs~~~~~~~~~~~~--~~~~~~~~- 317 (572)
T 3jvp_A 241 DIVPLGERAGGLLPEMAEKMGLNPGIAVAVGNVDAHAAVPAVGVTTPGKLVMAMGTSICHMLLGEKEQE--VEGMCGVV- 317 (572)
T ss_dssp CEECTTSEEEECCHHHHHHHTSCTTCEEECCEETTTTHHHHTTCCSSEEEEEEESSSEEEEEEESSCCC--CTTCSEEE-
T ss_pred ccCCcCccccccCHHHHHHhCCCCCCeEEEeCchHHHHHhhCCCCCCCcEEEEecchhheeeecCCCcc--CCCceeec-
Confidence 9999999999993 59999999999999999999999999999999999999776665553221 12222211
Q ss_pred eecCCCCCceEEEcccccchhhHHHHHHHHcCC-----------CCCHHHHHHHHHhcC-CCCCeEEEeCCCCCCCCCCC
Q psy1586 285 YQFGARAPITYALEGSIAVAGQTFKWLRDNLNI-----------IADLNEIESLVQKSS-SHTDVVFVPAFSGLYAPYWQ 352 (431)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~G~~~~w~~~~~~~-----------~~~~~~~~~~~~~~~-~~~~l~~~P~~~G~r~p~~~ 352 (431)
.++..|+.|.++++++++|.+++||++.+.. .+.|+++++++++++ +++|++|+|||.|+|+|+||
T Consensus 318 --~~~~~~g~~~~~g~~~~~G~~~~W~~~~~~~~~~~~~~~~~g~~~~~~l~~~a~~~~~g~~gl~~lP~~~Ger~P~~d 395 (572)
T 3jvp_A 318 --EDGIIPGYLGYEAGQSAVGDIFAWFVKHGVSAATFDEAQEKGVNVHALLEEKASQLRPGESGLLALDWWNGNRSILVD 395 (572)
T ss_dssp --ETSSSTTSEEEEEEESCSHHHHHHHHHHTSBHHHHHHHHHTTBCHHHHHHHHHTSSCTTSSCCEEECCTTCCCTTTCC
T ss_pred --cCccCCCcEEEeehhhhHHHHHHHHHHhccchhhHHHHHhcCCCHHHHHHHHHHhCCCCCCCeEeCCccCCCCCCCCC
Confidence 1245689999999999999999999998852 123788999998876 89999999999999999999
Q ss_pred CCCceeEecCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhcCCCCceEEEEcCCc-cChHHHHHHhhhcCCceEecCC
Q psy1586 353 RDARSIICGLTDETSKVDIVKAALEAVCFQTRDILEAMKEDCGVALEKLLVDGGMT-ANKYLMQLQADLTGTPVSSSPI 430 (431)
Q Consensus 353 ~~~~g~~~gl~~~~~~~~~~rA~~Egia~~~r~~~~~l~~~~g~~~~~i~~~GG~~-~s~~~~qi~Advlg~pv~~~~~ 430 (431)
|++||+|+|++..|+++|++||++||+||.+|.+++.|++ .|.++++|+++||++ ||++|+||+||+||+||++++.
T Consensus 396 ~~arg~~~Gl~~~~t~~~l~RAvlEgia~~~r~~~~~l~~-~g~~~~~i~~~GGga~ks~~~~Qi~ADv~g~pV~~~~~ 473 (572)
T 3jvp_A 396 TELSGMLLGYTLQTKPEEIYRALLEATAFGTRAIVDAFHG-RGVEVHELYACGGLPQKNHLLMQIFADVTNREIKVAAS 473 (572)
T ss_dssp SSCCEEEEEECTTCCHHHHHHHHHHHHHHHHHHHHHHHHT-TTCCEEEEEEESSHHHHCHHHHHHHHHHHTSCEEEBCC
T ss_pred CCcCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCcCEEEEEcCchhhCHHHHHHHHHHHCCeeEecCC
Confidence 9999999999999999999999999999999999999987 688999999999999 9999999999999999998764
No 15
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703}
Probab=100.00 E-value=2.7e-80 Score=633.66 Aligned_cols=400 Identities=19% Similarity=0.292 Sum_probs=358.7
Q ss_pred CCcEEEEEeCCCCeEEEEEEeecceecCCCCceeeCHHHHHHHHHHHHHHHHHhhhhcCCCCCCeeEEEEecccceEEEe
Q psy1586 1 MSKSTIVFAASTSELLTYHKVELETLTPKEGWVEQDPMVILHLVEECIEKCVGYLVDLDINPNDIVAIGITNQRETTIVW 80 (431)
Q Consensus 1 ~s~K~~l~d~~~g~~l~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~I~~I~is~~~~~~v~~ 80 (431)
+|+|++|||.++|+++++.+.++ ||+.||||++||++++++++++ +. ..+|.+||||+|++++|+|
T Consensus 15 ts~ka~l~d~~~G~i~~~~~~~~------~g~~e~d~~~~~~~i~~~l~~~-------~~-~~~I~~Igis~q~~~~v~~ 80 (515)
T 3i8b_A 15 QSCKVRVTDAETGELVRFGQAKH------PNGTSVDPSYWWSAFQEAAEQA-------GG-LDDVSALAVGGQQHGMVIL 80 (515)
T ss_dssp SEEEEEEEETTTCCEEEEEEEEC------CSSSEECTHHHHHHHHHHHHHT-------TC-STTEEEEEEEECSSCBEEE
T ss_pred ccEEEEEEECCCCeEEEEEEEeC------CCCceECHHHHHHHHHHHHHhc-------CC-ccCceEEEEeCCcceEEEE
Confidence 58999999943899999998876 5899999999999999888753 22 4789999999999999999
Q ss_pred eCCCCccccccceecCcccHHHHHHHHhhccC-h--------------hHHHhHhCCCCCccchHHHHHHHHhcchHHHH
Q psy1586 81 DSTTGKPLYNAIVWSDVRTKSIVDTYASKIKN-T--------------TFLTTICGLPISTYFSAVKLNWLMDNVDEVKN 145 (431)
Q Consensus 81 d~~~g~pl~~~i~w~D~R~~~~~~~l~~~~~~-~--------------~~~~~~tG~~~~~~~~~~kl~wl~~~~p~~~~ 145 (431)
|+ +|+|++|+|+|+|+|+.++++++.+.++. . +.++++||+++++.++++||+||++|+|++|+
T Consensus 81 D~-~G~pl~~~i~W~D~R~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~tG~~~~~~~~~~kl~Wl~~~~Pe~~~ 159 (515)
T 3i8b_A 81 DN-QGNVIRDAMLWNDTSSAPQAAALIEKLGAAPAQDGEPEDPIARGKQRWVKAVGSSPVASYTLTKVAWVAENEPENVK 159 (515)
T ss_dssp CT-TSCBCSCEECTTCCTTHHHHHHHHHHHHCSCCCTTCCSSHHHHHHHHHHHHHSSCCCTTSHHHHHHHHHHHCHHHHT
T ss_pred CC-CCCCcCCcceecCCCHHHHHHHHHHhcCcccccccccccccchhHHHHHHHHCCCCCchhHHHHHHHHHHcChHHHH
Confidence 99 79999999999999999999999987653 1 67999999999999999999999999999999
Q ss_pred hhhcCcccccChhHHHHHHhcCCC--------CCcceeeccchhcccccccccCCCCcHHHHhhc-CCC-----------
Q psy1586 146 AIKDNKCLFGTVDSWLIWNLTGGV--------DGGLHITDVTNASRTLLMNLRTLQWEPQLLKFF-NIP----------- 205 (431)
Q Consensus 146 ~~~~~~~~~~~~~d~l~~~LTG~~--------~~~~~~~d~s~As~tgl~d~~~~~W~~~~l~~~-gi~----------- 205 (431)
++ .+|++++|||.|+|||+. +...+++|+|+||+|+|||+++++|++++|+.+ ||+
T Consensus 160 ~~----~~~l~~~dyl~~~LTG~~~~~~~~~~~~~~~~td~s~As~t~l~d~~~~~W~~~ll~~~~gi~~~~~~~~~~~~ 235 (515)
T 3i8b_A 160 KI----AAICLPHDWLSWRIAGYGPVAEGEDAHLEALFTDRSDASGTIYYDAASNEYRRDLIAMVLEAAEGAKAAQSHAE 235 (515)
T ss_dssp TC----SEEECHHHHHHHHHTTCCCCCTTSCCCGGGCEEEHHHHTTSSSEETTTTEECHHHHHHHHHHHHCHHHHHHHHH
T ss_pred HH----heecCHHHHHHHHhcCCCcccccccccccceeecHHHhhcccCeeCCcCccCHHHHHhhcCCCcccccccccch
Confidence 87 478999999999999971 000158999999999999999999999999998 998
Q ss_pred CCCCCccccCCccccccc------CCCCCCCcEEEecCchHHhHHhcccCCCCcEEEEecccceeccccCCccccCCCCc
Q psy1586 206 SQILPQIRSSSEIYGCLK------DGPLQGVPISGILGDQQSALVGQSCLQAGQAKNTYGTGCFLLYNTGTAIVHSSQGL 279 (431)
Q Consensus 206 ~~~lP~i~~~g~~~G~~~------~gl~~g~pV~~g~~D~~aa~~g~g~~~~g~~~~~~GTs~~i~~~~~~~~~~~~~~~ 279 (431)
.++||+|+++++++|++. +||++|+||++|++|++|+++|+| +++|++++++|||+++..++++ +..++.+.
T Consensus 236 ~~~LP~i~~~~~~~G~v~~~~A~~~Gl~~g~pV~~g~~D~~aa~lG~g-~~~g~~~~s~GTs~~~~~~~~~-~~~~~~~~ 313 (515)
T 3i8b_A 236 AIVLPTVLGPRDAAPVKADPAIAGKNVEGGCLLAPGGGDNAMASLGLG-MAVGDVSISLGTSGVAAAISEN-PTYDLTGA 313 (515)
T ss_dssp HSBCCEEECTTCCCSSCCCTTTTTTTSTTCCEECCCEEHHHHHHHHTT-CCTTEEEEEESSSEEEEECBSS-CCCCTTSC
T ss_pred HHHCCCCcCCcCcccCcCHHHHHHhCCCCCCeEEEECchHHHHHhhCC-CCCCcEEEEechhhhhhcccCc-cccCCCCc
Confidence 789999999999999983 589999999999999999999999 8999999999999998876654 44444565
Q ss_pred eeEEeeecCCCCCceEEEcccccchhhHHHHHHHHcCCCCCHHHHHHHHHhcC-CCCCeEEEeCCCCCCCCCCCCCCcee
Q psy1586 280 LTTVAYQFGARAPITYALEGSIAVAGQTFKWLRDNLNIIADLNEIESLVQKSS-SHTDVVFVPAFSGLYAPYWQRDARSI 358 (431)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~w~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~P~~~G~r~p~~~~~~~g~ 358 (431)
+..+++ .++.|..++++.++|.+++|+++.++. +|+++++++++++ ++++++|+|||.|+|+|+| +++||.
T Consensus 314 ~~~~~~-----~~g~~~~~~~~~~gg~~l~w~~~~~~~--~~~~l~~~a~~~~~g~~gl~~lP~~~Ger~P~~-~~arg~ 385 (515)
T 3i8b_A 314 VSGFAD-----CTGHYLPLACTINGSRILDAGRAALGV--DYDELAKLAFASKPGANGITLVPYFDGERTPNR-PNATAT 385 (515)
T ss_dssp SEEEEC-----SSSSEEEEEEESCSTHHHHHHHHHHTC--CHHHHHHHHHHSCTTGGGCEEECCTTCBTTTTB-TTCCCE
T ss_pred EEeeec-----CCCCEEEeeecccHHHHHHHHHHHhCC--CHHHHHHHHHhCCCCCCCeEEecCCCCCcCCCC-cCcceE
Confidence 555442 267798889999999999999999875 7999999999986 8899999999999999976 999999
Q ss_pred EecCCCCC-CHHHHHHHHHhhhhHHHHHHHHHHHHhcCCCCceEEEEcCCccChHHHHHHhhhcCCceEecCC
Q psy1586 359 ICGLTDET-SKVDIVKAALEAVCFQTRDILEAMKEDCGVALEKLLVDGGMTANKYLMQLQADLTGTPVSSSPI 430 (431)
Q Consensus 359 ~~gl~~~~-~~~~~~rA~~Egia~~~r~~~~~l~~~~g~~~~~i~~~GG~~~s~~~~qi~Advlg~pv~~~~~ 430 (431)
|+|++..| +++|++||++||++|.+|.+++.|++ .|.++++|+++||++||++|+||+||+||+||++++.
T Consensus 386 ~~Gl~~~~~~~~~l~RAvlEgia~~~r~~l~~l~~-~g~~~~~i~~~GGgaks~~~~Qi~ADvlg~pV~~~~~ 457 (515)
T 3i8b_A 386 FSGMTLANTTRENLARAFVEGLLCSQRDCLELIRS-LGASITRILLIGGGAKSEAIRTLAPSILGMDVTRPAT 457 (515)
T ss_dssp EESCCTTTCSHHHHHHHHHHHHHHHHHHHHHHHHH-TTCCCCEEEEESGGGGCHHHHHHHHHHHTSCEEEECC
T ss_pred EecCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCCCEEEEECchhcCHHHHHHHHHHhCCceEecCC
Confidence 99999999 99999999999999999999999987 6889999999999999999999999999999998753
No 16
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A*
Probab=100.00 E-value=1e-78 Score=629.00 Aligned_cols=404 Identities=21% Similarity=0.320 Sum_probs=356.5
Q ss_pred CCcEEEEEeCCCCeEEEEEEeecceecCCCCceeeCHHHHHHHHHHHHHHHHHhhhhcCCCCCCeeEEEEecccceEEEe
Q psy1586 1 MSKSTIVFAASTSELLTYHKVELETLTPKEGWVEQDPMVILHLVEECIEKCVGYLVDLDINPNDIVAIGITNQRETTIVW 80 (431)
Q Consensus 1 ~s~K~~l~d~~~g~~l~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~I~~I~is~~~~~~v~~ 80 (431)
+|+|++||| ++|+++++.+.+++...|++||+||||++||+++++++++++++. ++++.+|.+||||+| +++|+|
T Consensus 15 ts~ka~l~d-~~G~il~~~~~~~~~~~p~~g~~eqdp~~~~~~~~~~i~~~~~~~---~~~~~~I~~Igis~~-~~~v~~ 89 (554)
T 3l0q_A 15 GSARAGVFD-LQGRMVGQASREITMFKPKADFVEQSSENIWQAVCNAVRDAVNQA---DINPIQVKGLGFDAT-CSLVVL 89 (554)
T ss_dssp SEEEEEEEE-TTSCEEEEEEEECCCEEEETTEEEECHHHHHHHHHHHHHHHHHHH---TCCGGGEEEEEEEEC-SCEEEE
T ss_pred ccEEEEEEC-CCCCEEEEEEEecccccCCCCccccCHHHHHHHHHHHHHHHHHHc---CCCHhHEEEEEEcCC-CceEEE
Confidence 589999999 699999999999998889999999999999999999999998753 556689999999999 799999
Q ss_pred eCCCCccc---------cccceecCcccHHHHHHHHhhccChhHHHhHhCCCCCccchHHHHHHHHhcchHHHHhhhcCc
Q psy1586 81 DSTTGKPL---------YNAIVWSDVRTKSIVDTYASKIKNTTFLTTICGLPISTYFSAVKLNWLMDNVDEVKNAIKDNK 151 (431)
Q Consensus 81 d~~~g~pl---------~~~i~w~D~R~~~~~~~l~~~~~~~~~~~~~tG~~~~~~~~~~kl~wl~~~~p~~~~~~~~~~ 151 (431)
|+ +|+|| +|+|+|+|+|+.++++++++.. +.++++||+++++.++++||+||++|+|++|+++
T Consensus 90 D~-~G~pl~~~~~~~~~~~ai~W~D~Ra~~~~~~l~~~~---~~~~~~tG~~~~~~~~~~Kl~Wl~~~~Pe~~~~~---- 161 (554)
T 3l0q_A 90 DK-EGNPLTVSPSGRNEQNVIVWMDHRAITQAERINATK---HPVLEFVGGVISPEMQTPKLLWLKQHMPNTWSNV---- 161 (554)
T ss_dssp ET-TSCBCCCSTTCCTTCCEECTTCCTTHHHHHHHHHHT---CGGGGGBTTCCCTTSHHHHHHHHHHHCHHHHHHE----
T ss_pred CC-CCCEeeccCCCCCCCCcEEecccchHHHHHHHHHhH---HHHHHHhCCCCChhhHHHHHHHHHHhChHHHHHh----
Confidence 99 79999 8999999999999999998862 5688999999999999999999999999999987
Q ss_pred ccccChhHHHHHHhcCCCCCcceeeccchhccccc--ccccCCCCcHHHHhhcCCCCC------CCC-ccccCCcccc-c
Q psy1586 152 CLFGTVDSWLIWNLTGGVDGGLHITDVTNASRTLL--MNLRTLQWEPQLLKFFNIPSQ------ILP-QIRSSSEIYG-C 221 (431)
Q Consensus 152 ~~~~~~~d~l~~~LTG~~~~~~~~~d~s~As~tgl--~d~~~~~W~~~~l~~~gi~~~------~lP-~i~~~g~~~G-~ 221 (431)
.+|++++|||.|+|||+ . ++|++|.+++ ||+++++|++++|+.+||+.. +|| +|+++++++| +
T Consensus 162 ~~~~~~~dyl~~~LTG~-----~--~~s~as~t~~~~~d~~~~~W~~~ll~~~gi~~~~~~~~~~Lp~~i~~~~~~~G~~ 234 (554)
T 3l0q_A 162 GHLFDLPDFLTWRATKD-----E--TRSLCSTVCKWTYLGHEDRWDPSYFKLVGLADLLDNNAAKIGATVKPMGAPLGHG 234 (554)
T ss_dssp EEEEEHHHHHHHHHHSC-----C--CEEHHHHHHHSCCBTTTTBCCHHHHHHHTCGGGGHHHHTTTCSCEECTTCBCTTS
T ss_pred ceEEcHHHHHHHHHhCC-----c--cccccchhhccccccccCCCCHHHHHHcCCccccchhHHhCCCcccCCcCeeCcc
Confidence 48999999999999998 5 3677777764 788999999999999999862 899 6999999999 7
Q ss_pred c------cCCCCCCCcEEEecCchHHhHHhc-ccC-CCC-------cEEEEecccceeccccCCccccCCCCceeEEeee
Q psy1586 222 L------KDGPLQGVPISGILGDQQSALVGQ-SCL-QAG-------QAKNTYGTGCFLLYNTGTAIVHSSQGLLTTVAYQ 286 (431)
Q Consensus 222 ~------~~gl~~g~pV~~g~~D~~aa~~g~-g~~-~~g-------~~~~~~GTs~~i~~~~~~~~~~~~~~~~~~~~~~ 286 (431)
+ ++||++|+||++|++|++|+++|+ |+. ++| ++.+++|||+++..++++ +... .+++..+ +
T Consensus 235 lt~~~A~~~GL~~g~pV~~g~gD~~aa~lg~~G~~~~~G~~~~~~~~~~~~~GTs~~~~~~~~~-~~~~-~~~~~~~-~- 310 (554)
T 3l0q_A 235 LSQRAASEMGLIPGTAVSVSIIDAHAGTIGILGASGVTGENANFDRRIALIGGTSTAHMAMSRS-AHFI-SGIWGPY-Y- 310 (554)
T ss_dssp SCHHHHHHHTCCTTCEEBCCEEHHHHHHHHHTTCCCTTSCCCCTTTEEEEECSSSEEEEEEESS-CCCC-TTSEEEE-E-
T ss_pred cCHHHHHHhCCCCCCeEEEeChHHHhHHhhccccccCCCccccccceEEEEecchheeeeecCC-cccc-CCcceee-c-
Confidence 8 369999999999999999999997 765 688 788999999888777654 3322 3444322 1
Q ss_pred cCCCCCceEEEcccccchhhHHHHHHHHcCC------------CCCHHHHHHHHHhcC-C-------CCCeEEEeCCCCC
Q psy1586 287 FGARAPITYALEGSIAVAGQTFKWLRDNLNI------------IADLNEIESLVQKSS-S-------HTDVVFVPAFSGL 346 (431)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~G~~~~w~~~~~~~------------~~~~~~~~~~~~~~~-~-------~~~l~~~P~~~G~ 346 (431)
.+..|+.|.++++++++|.+++|+++.++. .+.|+.+++++++++ + +++++|+|||.|+
T Consensus 311 -~~~~~~~~~~~g~~~~~G~~~~W~~~~~~~~~~~~~~a~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~gl~flP~~~Ge 389 (554)
T 3l0q_A 311 -SAILPEYWLNEGGQSATGALIDHIIQSHPCYPALLEQAKNKGETIYEALNYILRQMAGEPENIAFLTNDIHMLPYFHGN 389 (554)
T ss_dssp -TSSSTTCEEEEEEESCSHHHHHHHHHTSTTHHHHHHHHHHTTCCHHHHHHHHHHHHHSSGGGGGGGGTTCCEECCTTCB
T ss_pred -ccccCCceEecchhhhhHHHHHHHHHhcccchHHHHHHHhcCCCHHHHHHHHHHhcCCCCCccccccCceEEcccccCC
Confidence 235688999999999999999999998742 124777877776653 3 6899999999999
Q ss_pred CCCCCCCCCceeEecCCCCCCHHHH---HHHHHhhhhHHHHHHHHHHHHhcCCCCceEEEEcCCccChHHHHHHhhhcCC
Q psy1586 347 YAPYWQRDARSIICGLTDETSKVDI---VKAALEAVCFQTRDILEAMKEDCGVALEKLLVDGGMTANKYLMQLQADLTGT 423 (431)
Q Consensus 347 r~p~~~~~~~g~~~gl~~~~~~~~~---~rA~~Egia~~~r~~~~~l~~~~g~~~~~i~~~GG~~~s~~~~qi~Advlg~ 423 (431)
|+|+|||++||+|+|++..|+++|+ +||++||++|.+|++++.|++ .|.++++|+++||++||++|+||+|||||+
T Consensus 390 r~P~~d~~arg~~~Gl~~~~~~~~l~r~~rAvlEgia~~~r~~~e~l~~-~g~~~~~i~~~GG~aks~~~~Qi~ADv~g~ 468 (554)
T 3l0q_A 390 RSPRANPNLTGIITGLKLSTTPEDMALRYLATIQALALGTRHIIETMNQ-NGYNIDTMMASGGGTKNPIFVQEHANATGC 468 (554)
T ss_dssp CSSSCBTTCCCEECSCCSCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TTCCCCEEEEESGGGGCHHHHHHHHHHHCC
T ss_pred CCCCCCCCCcEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCCCEEEEeCccccCHHHHHHHHHhhCC
Confidence 9999999999999999999999999 899999999999999999987 588999999999999999999999999999
Q ss_pred ceEecCC
Q psy1586 424 PVSSSPI 430 (431)
Q Consensus 424 pv~~~~~ 430 (431)
||++++.
T Consensus 469 pV~~~~~ 475 (554)
T 3l0q_A 469 AMLLPEE 475 (554)
T ss_dssp EEEEESC
T ss_pred eEEecCC
Confidence 9998764
No 17
>4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A*
Probab=100.00 E-value=1.6e-77 Score=617.60 Aligned_cols=401 Identities=15% Similarity=0.174 Sum_probs=349.3
Q ss_pred CCcEEEEEeCCCCeEEEEEEeecceecCC----CCce-------eeCHH-HHHHHHHHHHHHHHHhhhhcCCCCCCeeEE
Q psy1586 1 MSKSTIVFAASTSELLTYHKVELETLTPK----EGWV-------EQDPM-VILHLVEECIEKCVGYLVDLDINPNDIVAI 68 (431)
Q Consensus 1 ~s~K~~l~d~~~g~~l~~~~~~~~~~~~~----~g~~-------e~d~~-~~~~~~~~~l~~~~~~~~~~~~~~~~I~~I 68 (431)
+|+|++||| ++|+++++++.+|+..+|+ +||. ||||+ .||++++.+.+.+. +.++++.+|++|
T Consensus 20 ts~Ka~l~d-~~G~vv~~~~~~~~~~~p~~~~~~g~~e~~~g~~eqdp~~~w~~~~~~~~~~l~----~~~~~~~~I~aI 94 (538)
T 4bc3_A 20 QQVKVVAVD-AELNVFYEESVHFDRDLPEFGTQGGVHVHKDGLTVTSPVLMWVQALDIILEKMK----ASGFDFSQVLAL 94 (538)
T ss_dssp SEEEEEEEE-TTCCEEEEEEEEHHHHSGGGCCBTTBEECTTSSCEEEEHHHHHHHHHHHHHHHH----HTTCCGGGEEEE
T ss_pred cCEEEEEEC-CCCCEEEEEEEecCCcCCcccCCCCeeecCCCccccCcHHHHHHHHHHHHHHHH----HcCCChHHeEEE
Confidence 589999999 5999999999999876664 6764 68897 57777766665542 246677899999
Q ss_pred EEecccceEEEeeCCCCc--------------------cccccceecCcccHHHHHHHHhhccChhHHHhHhCCCCCccc
Q psy1586 69 GITNQRETTIVWDSTTGK--------------------PLYNAIVWSDVRTKSIVDTYASKIKNTTFLTTICGLPISTYF 128 (431)
Q Consensus 69 ~is~~~~~~v~~d~~~g~--------------------pl~~~i~w~D~R~~~~~~~l~~~~~~~~~~~~~tG~~~~~~~ 128 (431)
|||+|+|++|+||+ +|+ |++|+|+|+|+|+.++++++.+.++..+.++++||+++++.+
T Consensus 95 gis~q~~~~v~~D~-~g~~~l~~l~~~~~l~~~~~~~~pl~~ai~W~D~R~~~~~~~l~~~~~~~~~~~~~tG~~~~~~~ 173 (538)
T 4bc3_A 95 SGAGQQHGSIYWKA-GAQQALTSLSPDLRLHQQLQDCFSISDCPVWMDSSTTAQCRQLEAAVGGAQALSCLTGSRAYERF 173 (538)
T ss_dssp EEEECSSCEEEEET-THHHHHHTCCTTSCHHHHHTTCBSCSEEECTTCCCCHHHHHHHHHHHTSHHHHHHHHSSCCCTTS
T ss_pred EecccceeEEEECC-CccccccccccccchhhhccccccccCCcccccCcHHHHHHHHHHhhCcHHHHHHHHCCCCcccc
Confidence 99999999999999 664 999999999999999999999877645789999999999999
Q ss_pred hHHHHHHHHhcchHHHHhhhcCcccccChhHHHHHHhcCCCCCccee-eccchhcccccccccCCCCcHHHHhhcCCC-C
Q psy1586 129 SAVKLNWLMDNVDEVKNAIKDNKCLFGTVDSWLIWNLTGGVDGGLHI-TDVTNASRTLLMNLRTLQWEPQLLKFFNIP-S 206 (431)
Q Consensus 129 ~~~kl~wl~~~~p~~~~~~~~~~~~~~~~~d~l~~~LTG~~~~~~~~-~d~s~As~tgl~d~~~~~W~~~~l~~~gi~-~ 206 (431)
+++||+||++|+|++|+++ .+|++++|||.|+|||+ .+ +|+|+||+|+|||+++++|++++|+.+|++ .
T Consensus 174 ~~~kl~wl~~~~Pe~~~~~----~~~~~~~d~l~~~LTG~-----~~~td~s~As~t~l~d~~~~~W~~~ll~~~gi~~~ 244 (538)
T 4bc3_A 174 TGNQIAKIYQQNPEAYSHT----ERISLVSSFAASLFLGS-----YSPIDYSDGSGMNLLQIQDKVWSQACLGACAPHLE 244 (538)
T ss_dssp HHHHHHHHHHHCHHHHHTE----EEEEEHHHHHHHHHHTS-----CCCCBHHHHTTSSCEETTTTEECHHHHHHHCTTHH
T ss_pred HHHHHHHHHHcCHHHHHHh----heEEcHHHHHHHHHhCC-----CcccccchhhcccccccccCCCCHHHHHHhCccHH
Confidence 9999999999999999987 48999999999999998 76 999999999999999999999999999998 7
Q ss_pred CCCCccccCCccccccc------CCCCCCCcEEEecCchHHhHHhcccCCCCcEEEEecccceeccccCCccccCCCCce
Q psy1586 207 QILPQIRSSSEIYGCLK------DGPLQGVPISGILGDQQSALVGQSCLQAGQAKNTYGTGCFLLYNTGTAIVHSSQGLL 280 (431)
Q Consensus 207 ~~lP~i~~~g~~~G~~~------~gl~~g~pV~~g~~D~~aa~~g~g~~~~g~~~~~~GTs~~i~~~~~~~~~~~~~~~~ 280 (431)
++||+|+++++++|++. +||++|+||++|+||++|+++|++ +++|++++++|||+++.+.++++ .....+
T Consensus 245 ~~LP~i~~~~~~~G~l~~~~a~~~Gl~~g~pV~~g~~D~~aa~~g~~-~~~g~~~~s~GTs~~~~~~~~~~-~~~~~~-- 320 (538)
T 4bc3_A 245 EKLSPPVPSCSVVGAISSYYVQRYGFPPGCKVVAFTGDNPASLAGMR-LEEGDIAVSLGTSDTLFLWLQEP-MPALEG-- 320 (538)
T ss_dssp HHHCCCBCSSCEEEECCHHHHHHHCCCTTCEEECCEEHHHHHHHHTT-CCTTCEEEEESSSEEEEEEESSC-CCCSSS--
T ss_pred HHCCCcccccccccccCHHHHHHhCCCCCCeEEEecccHHhhhhccc-cCCCcEEEEeccchheEEecCCC-CCCCCc--
Confidence 89999999999999993 599999999999999999999995 89999999999999988877653 333333
Q ss_pred eEEeeecCCCCCceEEEcccccchhhHHHHHHHHcCCCCCHHHHHHHHHhcC-CCCCeEEEeCCCCCCCCCCCCCCceeE
Q psy1586 281 TTVAYQFGARAPITYALEGSIAVAGQTFKWLRDNLNIIADLNEIESLVQKSS-SHTDVVFVPAFSGLYAPYWQRDARSII 359 (431)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~G~~~~w~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~P~~~G~r~p~~~~~~~g~~ 359 (431)
..+++. ..++.|..+++++++|.+++|+++.++ ..+|+++++++++++ +++|++|+|||.|+|+|+ ++|.|
T Consensus 321 ~~~~~~---~~~~~~~~~~~~~~gg~~~~w~~~~~~-~~~~~~l~~~a~~~~~g~~gl~~lp~~~Ger~P~----~~G~~ 392 (538)
T 4bc3_A 321 HIFCNP---VDSQHYMALLCFKNGSLMREKIRNESV-SRSWSDFSKALQSTEMGNGGNLGFYFDVMEITPE----IIGRH 392 (538)
T ss_dssp EEEEET---TEEEEEEEEEEESSSHHHHHHHHHHHS-TTCHHHHHHHHHTSCTTGGGCEEEEESSCCSSSC----CCEEE
T ss_pred ceEEee---cCCCCEEEeehhhccchHHHHHHHHhc-CCCHHHHHHHHhcCCCCCCCeEEeecCCCCcCCC----CCcee
Confidence 223331 124579888999999999999999886 358999999999887 889999999999999996 45555
Q ss_pred e------cCCCCCCHHHHHHHHHhhhhHHHHHHHHHHHHhcCCCCceEEEEcCCccChHHHHHHhhhcCCceEecCC
Q psy1586 360 C------GLTDETSKVDIVKAALEAVCFQTRDILEAMKEDCGVALEKLLVDGGMTANKYLMQLQADLTGTPVSSSPI 430 (431)
Q Consensus 360 ~------gl~~~~~~~~~~rA~~Egia~~~r~~~~~l~~~~g~~~~~i~~~GG~~~s~~~~qi~Advlg~pv~~~~~ 430 (431)
. |++. |+++|++||++||++|.+|.+++.|++ .|.++++|+++||++||++|+||+||+||+||++++.
T Consensus 393 ~~~~~~~g~~~-~~~~~l~RAvlEgia~~~r~~~~~l~~-~g~~~~~i~~~GGga~s~~~~Qi~ADv~g~pV~~~~~ 467 (538)
T 4bc3_A 393 RFNTENHKVAA-FPGDVEVRALIEGQFMAKRIHAEGLGY-RVMSKTKILATGGASHNREILQVLADVFDAPVYVIDT 467 (538)
T ss_dssp EECTTSCEESC-CCHHHHHHHHHHHHHHHHHHHHHHTTC-CCCTTCCEEEEEGGGGCHHHHHHHHHHHTSCEEECCC
T ss_pred eeccccccccC-CCHHHHHHHHHHHHHHHHHHHHHHhhh-cCCCCCeEEEEcchhcCHHHHHHHHHHhCCceEecCC
Confidence 4 2333 899999999999999999999999976 5778899999999999999999999999999998754
No 18
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans}
Probab=100.00 E-value=8e-75 Score=587.21 Aligned_cols=383 Identities=13% Similarity=0.145 Sum_probs=325.7
Q ss_pred CCcEEEEEeCCCCeEEEEEEeecceecCCCCceeeCHHHHHHHHHHHHHHHHHhhhhcCCCCCCeeEEEEecccceEEEe
Q psy1586 1 MSKSTIVFAASTSELLTYHKVELETLTPKEGWVEQDPMVILHLVEECIEKCVGYLVDLDINPNDIVAIGITNQRETTIVW 80 (431)
Q Consensus 1 ~s~K~~l~d~~~g~~l~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~I~~I~is~~~~~~v~~ 80 (431)
+|+|++||| ++|+++++.+.+++. .+.+||+||||++||++++++++++. + .+|.+||||+|++++|+|
T Consensus 16 ts~Ka~l~d-~~G~i~~~~~~~~~~-~~~~g~~eqdp~~~~~~~~~~i~~~~-~--------~~I~aIgis~~~~~~v~~ 84 (482)
T 3h6e_A 16 TLSKVSLWD-LDGRMLDRQVRPSIP-LEIDGIRRLDAPDTGRWLLDVLSRYA-D--------HPVTTIVPVGHGAGIAAL 84 (482)
T ss_dssp SEEEEEEEC-TTSCEEEEEEEECCC-EESSSCEECCHHHHHHHHHHHHHHTT-T--------SCCCEEEEEECSSCEEEE
T ss_pred CCeEEEEEE-CCCcEEEEEEecCCc-ccCCCceeECHHHHHHHHHHHHHHHH-h--------cCCCEEEEecCcCCEEEE
Confidence 489999999 699999999999986 47899999999999999999998864 2 579999999999999999
Q ss_pred eCCCCccccccceecCcccHHHHHHHHhhccChhHHHhHhCCCCCcc--chHHHHHHHHhcchHHHHhhhcCcccccChh
Q psy1586 81 DSTTGKPLYNAIVWSDVRTKSIVDTYASKIKNTTFLTTICGLPISTY--FSAVKLNWLMDNVDEVKNAIKDNKCLFGTVD 158 (431)
Q Consensus 81 d~~~g~pl~~~i~w~D~R~~~~~~~l~~~~~~~~~~~~~tG~~~~~~--~~~~kl~wl~~~~p~~~~~~~~~~~~~~~~~ 158 (431)
| + |+|++|+|+|+|+|+.++++++.+..+ .+++||+++++. ++++||+|+++|+|++|+++ . |++++
T Consensus 85 D-~-G~pl~~ai~w~D~R~~~~~~~l~~~~~----~~~~tG~~~~~~~~~~~~kl~Wl~~~~Pe~~~~~----~-~l~~~ 153 (482)
T 3h6e_A 85 T-D-GRLAFPPLDYEQSIPEAVMADYRSQRD----PFARTGSPALPDGLNIGSQLWWLDQLHPDVMANA----T-LLPWA 153 (482)
T ss_dssp E-T-TEECSCCBCTTSCCCHHHHHHHHTTCC----CHHHHCCCCCSTTSSHHHHHHHHHHHSHHHHHSC----E-EEEHH
T ss_pred C-C-CCEeccccccCCcccHHHHHHHHhhCh----HHHHhCCCCCCCchhHHHHHHHHHHcCchhhhcC----E-EEccH
Confidence 9 5 999999999999999999999987643 278999999997 89999999999999999986 4 89999
Q ss_pred HHHHHHhcCCCCCcceeeccch-hcccccccccCCCCcHHHHhhcCCCCCCCCccccCCccccccc------CCCCCCCc
Q psy1586 159 SWLIWNLTGGVDGGLHITDVTN-ASRTLLMNLRTLQWEPQLLKFFNIPSQILPQIRSSSEIYGCLK------DGPLQGVP 231 (431)
Q Consensus 159 d~l~~~LTG~~~~~~~~~d~s~-As~tgl~d~~~~~W~~~~l~~~gi~~~~lP~i~~~g~~~G~~~------~gl~~g~p 231 (431)
|||.|+|||+ .++|+|+ ||+|+|||+++++|+ ++|+.+||+ ++||+|+++++++|++. +||++|+|
T Consensus 154 dyl~~~LTG~-----~~td~s~~As~t~l~d~~~~~W~-~ll~~~gi~-~~LP~v~~~~~~~G~l~~~~A~~~GL~~g~p 226 (482)
T 3h6e_A 154 QYWAWFLTGR-----AVSEVTSLGCHSDLWDPQDGDFS-PMAKRLGWA-ARFAPIVRAGDTVGALLPAIAERTGLSPDVQ 226 (482)
T ss_dssp HHHHHHTTSC-----CCEEHHHHTTTCSSEETTTTEEC-HHHHHTTCG-GGBCCEECTTSEEEECCHHHHHHHTCCTTCE
T ss_pred HHHHHHHhCC-----eeeecchhhhccCCccCCcCcHH-HHHHHcCCH-HhCCCCcCCCceeeeeCHHHHHHhCCCCCCE
Confidence 9999999999 9999998 899999999999999 599999998 89999999999999993 59999999
Q ss_pred EEEecCchHHhHHh---cccCCCCc-EEEEecccceeccccC---Ccc-ccCCCCceeEEeeecCCCCCceEEEcccccc
Q psy1586 232 ISGILGDQQSALVG---QSCLQAGQ-AKNTYGTGCFLLYNTG---TAI-VHSSQGLLTTVAYQFGARAPITYALEGSIAV 303 (431)
Q Consensus 232 V~~g~~D~~aa~~g---~g~~~~g~-~~~~~GTs~~i~~~~~---~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (431)
|++|++|++|+++| +|++++|+ +++++|||.++....+ +.+ ..+..++...+ ..++ |.+++...+
T Consensus 227 V~~g~~D~~aa~lG~~g~g~~~~g~~~~~s~GT~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~-~~~~g~~~~ 299 (482)
T 3h6e_A 227 VLAGLHDSNAALLAARGFAEIADNEATVLSTGTWFIAMRLPATPVDTATLPEARDCLVNV------DVHG-RPVPSARFM 299 (482)
T ss_dssp EECCEEHHHHHHHHHTTSTTTTTSSEEEEECSSSEEEEEECSSCCCGGGCCGGGTEEEEE------CTTS-CEEEEEEEC
T ss_pred EEEeCcHHHHHHhhhhccCCcCCCCEEEEECCceeEEEEecCccCCccccchhhceeecc------cccc-ccccchhhh
Confidence 99999999999999 99999997 5899999977543333 112 22222333221 0122 455666778
Q ss_pred hhhHHHHHHHHcCCCCC--HHHHHHHHHhc-CCCCCeEEEeCCCCCCCCCCCCCCceeEecCCCCCCHHHHHHHHHhh--
Q psy1586 304 AGQTFKWLRDNLNIIAD--LNEIESLVQKS-SSHTDVVFVPAFSGLYAPYWQRDARSIICGLTDETSKVDIVKAALEA-- 378 (431)
Q Consensus 304 ~G~~~~w~~~~~~~~~~--~~~~~~~~~~~-~~~~~l~~~P~~~G~r~p~~~~~~~g~~~gl~~~~~~~~~~rA~~Eg-- 378 (431)
+|..++|+++......+ ++..+.++... ++++|++|+|||.|+|+|+||+ ||+|+|++. +|++||++|+
T Consensus 300 ~G~~~~w~~~~~~~~~~~~~~~~~~~a~~~~~g~~Gl~flP~l~Ger~P~~d~--rG~~~Gl~~----~~l~RA~lE~~G 373 (482)
T 3h6e_A 300 GGREIETLIEIDTRRVDIKPDQPALLAAVPEVLRHGRMILPTLMRGFGPYPHG--RFAWINRPE----DWFERRAAACLY 373 (482)
T ss_dssp HHHHHHHHHCSGGGCTTCGGGHHHHHHTHHHHHHTTCEEESCSSTTCSSCTTC--CCEEESCCS----SHHHHHHHHHHH
T ss_pred hHHHHHHHHHhcccccccccchhhHHHhccccCCCCeEEecCCCCCCCCCCCC--ceEEeCCCH----HHHHHHHHHHHh
Confidence 99999999654432111 23333333333 3889999999999999999987 999999998 7999999995
Q ss_pred hhHHHHHHHHHHHHhcCCCCceEEEEcCCccChHHHHHHhhh-cCCceEecCC
Q psy1586 379 VCFQTRDILEAMKEDCGVALEKLLVDGGMTANKYLMQLQADL-TGTPVSSSPI 430 (431)
Q Consensus 379 ia~~~r~~~~~l~~~~g~~~~~i~~~GG~~~s~~~~qi~Adv-lg~pv~~~~~ 430 (431)
++|.+|.+++.|++ .++|+++||++||++|+||+||| ||+||++++.
T Consensus 374 ia~~~r~~l~~~~~-----~~~i~~~GG~a~s~~w~Qi~ADv~~g~pV~~~~~ 421 (482)
T 3h6e_A 374 AALVADTALDLIGS-----TGRILVEGRFAEADVFVRALASLRPDCAVYTANA 421 (482)
T ss_dssp HHHHHHHHHHHTTC-----CSEEEEESGGGGCHHHHHHHHHHSTTSEEEEESS
T ss_pred HHHHHHHHHHHhcC-----CCeEEEeCCcccCHHHHHHHhhhcCCCeEEEcCC
Confidence 99999999999864 27899999999999999999999 9999999864
No 19
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A*
Probab=100.00 E-value=9.5e-71 Score=562.57 Aligned_cols=397 Identities=18% Similarity=0.232 Sum_probs=333.4
Q ss_pred CCcEEEEEeCCCCeEEEEEEeecce----ecCCCCceeeCHHHHHHHHHHHHHHHHHhhhhcCCCCCCeeEEEEecccce
Q psy1586 1 MSKSTIVFAASTSELLTYHKVELET----LTPKEGWVEQDPMVILHLVEECIEKCVGYLVDLDINPNDIVAIGITNQRET 76 (431)
Q Consensus 1 ~s~K~~l~d~~~g~~l~~~~~~~~~----~~~~~g~~e~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~I~~I~is~~~~~ 76 (431)
+|+|++||| .+|+++...+.++.. ..+.+|+.||||++||++++++++++... ..+|.+||||+|+|+
T Consensus 14 ts~k~~l~d-~~g~~~~~~~~~~~~~~~~~~~~~g~~e~d~~~~~~~i~~~~~~~~~~-------~~~i~~Igis~q~~~ 85 (489)
T 2uyt_A 14 SSGRVMLAR-YERECRSLTLREIHRFNNGLHSQNGYVTWDVDSLESAIRLGLNKVCAA-------GIAIDSIGIDTWGVD 85 (489)
T ss_dssp SEEEEEEEE-EEGGGTEEEEEEEEEEECCCEEETTEEECCHHHHHHHHHHHHHHHHHT-------TCCCCEEEEEECSSC
T ss_pred CCceEEEEE-ecCccceEEEEEEeecCCCccccCCeEEECHHHHHHHHHHHHHHHHhC-------CCCceEEEEecCccc
Confidence 589999999 589988877766542 34678999999999999999999887542 357999999999999
Q ss_pred EEEeeCCCCccccccceecCcccHHHHHHHHhhccChhHHHhHhCCCCCccchHHHHHHHHhcchHHHHhhhcCcccccC
Q psy1586 77 TIVWDSTTGKPLYNAIVWSDVRTKSIVDTYASKIKNTTFLTTICGLPISTYFSAVKLNWLMDNVDEVKNAIKDNKCLFGT 156 (431)
Q Consensus 77 ~v~~d~~~g~pl~~~i~w~D~R~~~~~~~l~~~~~~~~~~~~~tG~~~~~~~~~~kl~wl~~~~p~~~~~~~~~~~~~~~ 156 (431)
.++||+ +|+|++|+|+|+|.|+.++++++.+..+ .+.++++||+++++.++++||+||++|+|++|+++ .+++.
T Consensus 86 ~v~~D~-~G~~l~~~i~w~D~R~~~~~~~l~~~~~-~~~~~~~tG~~~~~~~~~~kl~Wl~~~~P~~~~~~----~~~l~ 159 (489)
T 2uyt_A 86 FVLLDQ-QGQRVGLPVAYRDSRTNGLMAQAQQQLG-KRDIYQRSGIQFLPFNTLYQLRALTEQQPELIPHI----AHALL 159 (489)
T ss_dssp EEEECT-TSCEESCCBCTTCGGGTTHHHHHHHHHC-HHHHHHHHCCCCCTTSHHHHHHHHHHHCGGGGGGC----CEEEE
T ss_pred EEEECC-CCCCccCCccccCCccHHHHHHHHHhcC-HHHHHHHhCCCCCCccHHHHHHHHHhcCchHHHHh----hhccC
Confidence 999999 6999999999999999999999988765 36799999999999999999999999999999887 47889
Q ss_pred hhHHHHHHhcCCCCCcceeeccchhcccccccccCCCCcHHHHhhcCCCCCCCCccccCCcccccccCCCCCCCcEEE-e
Q psy1586 157 VDSWLIWNLTGGVDGGLHITDVTNASRTLLMNLRTLQWEPQLLKFFNIPSQILPQIRSSSEIYGCLKDGPLQGVPISG-I 235 (431)
Q Consensus 157 ~~d~l~~~LTG~~~~~~~~~d~s~As~tgl~d~~~~~W~~~~l~~~gi~~~~lP~i~~~g~~~G~~~~gl~~g~pV~~-g 235 (431)
++|||.|+|||+ .++|+|+||+|+|||+++++|++++|+.+||+.++||+|+++++++|++.....+|+||++ |
T Consensus 160 ~~dyl~~~LTG~-----~~~d~s~As~t~l~d~~~~~W~~~ll~~~gi~~~~lP~i~~~~~~~G~~~~~~~~g~pV~~~g 234 (489)
T 2uyt_A 160 MPDYFSYRLTGK-----MNWEYTNATTTQLVNINSDDWDESLLAWSGANKAWFGRPTHPGNVIGHWICPQGNEIPVVAVA 234 (489)
T ss_dssp HHHHHHHHHHSC-----CCCBHHHHGGGTCEETTTTEECHHHHHHHTCCGGGSCCCBCTTCEEEEEECTTCCEEEEECCC
T ss_pred cHHHHHHHHhCC-----ccceehhhhhhcccccCcCccCHHHHHHcCCCHHHCCCccCCCcceeeeecccCCCCcEEEEC
Confidence 999999999999 9999999999999999999999999999999999999999999999997432237899997 8
Q ss_pred cCchHHhHHhcccCCCCcEEEEecccceeccccCCccccCCCCceeEEeeecCCCCCceEEEcccccchhhHHHHHHHHc
Q psy1586 236 LGDQQSALVGQSCLQAGQAKNTYGTGCFLLYNTGTAIVHSSQGLLTTVAYQFGARAPITYALEGSIAVAGQTFKWLRDNL 315 (431)
Q Consensus 236 ~~D~~aa~~g~g~~~~g~~~~~~GTs~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~w~~~~~ 315 (431)
++|++|+++|+|+.++|++++++|||+++.+.++.+.. ....+...+.+ . +..|+.|.+++++. | .|+++.+
T Consensus 235 ~~D~~aa~~g~g~~~~g~~~~s~GTs~~~~~~~~~~~~-~~~~~~~~~~~-~-~~~~~~~~~~~~~~--g---~W~~~~~ 306 (489)
T 2uyt_A 235 SHDTASAVIASPLNGSRAAYLSSGTWSLMGFESQTPFT-NDTALAANITN-E-GGAEGRYRVLKNIM--G---LWLLQRV 306 (489)
T ss_dssp CBHHHHHHHHSCCCSTTEEEEEESSSEEEEEEESSCCC-SHHHHHHTCEE-E-CCGGGCEEEEEEEC--T---THHHHHH
T ss_pred chHHHHHHhcCCCCCCCcEEEEEchHhhcccccCCCcc-CHHHHhhccee-e-cCCCCeEEEehhHh--H---HHHHHHh
Confidence 89999999999999999999999999987766553221 11111110001 1 13478898887654 3 5887765
Q ss_pred CC---CCCHHHHHHHHHhcCCCCCeEEEeCCCCCCCCCCCCC-----CceeEecC--CCCCCHHHHHHHHHhhhhHHHHH
Q psy1586 316 NI---IADLNEIESLVQKSSSHTDVVFVPAFSGLYAPYWQRD-----ARSIICGL--TDETSKVDIVKAALEAVCFQTRD 385 (431)
Q Consensus 316 ~~---~~~~~~~~~~~~~~~~~~~l~~~P~~~G~r~p~~~~~-----~~g~~~gl--~~~~~~~~~~rA~~Egia~~~r~ 385 (431)
.. .+.|+++.+.++..|+.++ +|+| ++.|+++|+ .+|.|.|+ +..|+++|++||++||++|.+|.
T Consensus 307 ~~~~~~~~~~~l~~~a~~~~~~~~-l~~p----~~~~~~~p~~~~~~~~g~~~g~~~~~~~t~~~l~RAvlEgia~~~r~ 381 (489)
T 2uyt_A 307 LQERQINDLPALIAATQALPACRF-IINP----NDDRFINPDEMCSEIQAACREMAQPIPESDAELARCIFDSLALLYAD 381 (489)
T ss_dssp HHHTTCCCHHHHHHHHTTSCSSSS-CCCT----TSGGGSSCSCHHHHHHHHHHHTTCCCCCSHHHHHHHHHHHHHHHHHH
T ss_pred hcccchhhHHHHHHHhccCCCcCe-eECC----CCCccCChhhhHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 21 2357777666654556554 4777 567788887 58899888 47899999999999999999999
Q ss_pred HHHHHHHhcCCCCceEEEEcCCccChHHHHHHhhhcCCceEecC
Q psy1586 386 ILEAMKEDCGVALEKLLVDGGMTANKYLMQLQADLTGTPVSSSP 429 (431)
Q Consensus 386 ~~~~l~~~~g~~~~~i~~~GG~~~s~~~~qi~Advlg~pv~~~~ 429 (431)
+++.|++..|.++++|+++||++||++|+||+||+||+||++++
T Consensus 382 ~~~~l~~~~g~~~~~i~~~GGgaks~~~~Qi~ADvlg~pV~~~~ 425 (489)
T 2uyt_A 382 VLHELAQLRGEDFSQLHIVGGGCQNTLLNQLCADACGIRVIAGP 425 (489)
T ss_dssp HHHHHHHHHTCCCSEEEEESGGGGCHHHHHHHHHHHTSEEEECC
T ss_pred HHHHHHHHhCCCCCEEEEeCChhhhHHHHHHHHHHHCCeeecCC
Confidence 99999876688899999999999999999999999999998754
No 20
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5
Probab=99.17 E-value=2.1e-11 Score=113.95 Aligned_cols=115 Identities=17% Similarity=0.265 Sum_probs=90.8
Q ss_pred ccccchhhHHHHHHHHcCCCCCHHHHHHHHHhcCCCCCeEEEeCCCCCCCCCCCCCCceeEecCC-CCCCHHHHHHHHHh
Q psy1586 299 GSIAVAGQTFKWLRDNLNIIADLNEIESLVQKSSSHTDVVFVPAFSGLYAPYWQRDARSIICGLT-DETSKVDIVKAALE 377 (431)
Q Consensus 299 ~~~~~~G~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~P~~~G~r~p~~~~~~~g~~~gl~-~~~~~~~~~rA~~E 377 (431)
-|...+|..++|+.+.++. +++++++++.+.+ .|+..+.|++.+ +++.++++. ..++++|++|+++|
T Consensus 126 ~ca~GtG~~le~~a~~lg~--~~~el~~la~~~~-------~p~~~~~~c~vf---a~s~v~~l~~~g~~~~di~~av~e 193 (270)
T 1hux_A 126 KCAAGTGRFLDVMANILEV--KVSDLAELGAKST-------KRVAISSTCTVF---AESEVISQLSKGTDKIDIIAGIHR 193 (270)
T ss_dssp SCCTTSHHHHHHHHHHHTC--CTTTHHHHHTTCC-------SCCCCCCCSHHH---HHHHHHHHHHTTCCHHHHHHHHHH
T ss_pred ccchhhHHHHHHHHHHhCC--CHHHHHHHHhhCC-------CCCCcccccchh---HhHHHHHHhhCCCCHHHHHHHHHH
Confidence 3444568899999999986 7889999886543 466677777633 566677775 78899999999999
Q ss_pred hhhHHHHHHHHHHHHhcCCCCceEEEEcCCccChHHHHHHhhhcCCceEecCC
Q psy1586 378 AVCFQTRDILEAMKEDCGVALEKLLVDGGMTANKYLMQLQADLTGTPVSSSPI 430 (431)
Q Consensus 378 gia~~~r~~~~~l~~~~g~~~~~i~~~GG~~~s~~~~qi~Advlg~pv~~~~~ 430 (431)
++++.+. +.+++ .+. .++|+++||+++|+.|+|+++|+||+||.+++.
T Consensus 194 ~Va~~i~---~~~~~-~~~-~~~i~~~GG~a~n~~~~~~~~~~lg~~v~~p~~ 241 (270)
T 1hux_A 194 SVASRVI---GLANR-VGI-VKDVVMTGGVAQNYGVRGALEEGLGVEIKTSPL 241 (270)
T ss_dssp HHHHHHH---HHHHT-TCC-CSSEEEESGGGGCHHHHHHHHHHHCSCEECCGG
T ss_pred HHHHHHH---HHHhc-CCC-CCeEEEeCccccCHHHHHHHHHHHCCCeEeCCC
Confidence 9999974 34433 233 478999999999999999999999999988753
No 21
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14
Probab=97.15 E-value=0.0075 Score=55.98 Aligned_cols=130 Identities=15% Similarity=0.104 Sum_probs=80.5
Q ss_pred EcccccchhhHHHHHHHHcCCCCCHHHHHHHHHhcCC-CCCeEEEeCCCCCCCCCCCCCCceeEec-----CCCCCCHHH
Q psy1586 297 LEGSIAVAGQTFKWLRDNLNIIADLNEIESLVQKSSS-HTDVVFVPAFSGLYAPYWQRDARSIICG-----LTDETSKVD 370 (431)
Q Consensus 297 ~~~~~~~~G~~~~w~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~P~~~G~r~p~~~~~~~g~~~g-----l~~~~~~~~ 370 (431)
+.++...+|..++-.+..++. .+++++.+++.+-.. .-++. +-.+.|...+....+...+.+| +....+++|
T Consensus 134 ~~g~aaGgGtFl~l~a~ll~~-~~~~el~~lA~~g~~~~vDl~-v~DIy~~~~~~l~~~s~as~Fgk~~~l~~~g~~~eD 211 (287)
T 2ews_A 134 VGGIGTGGGMIQGLGYLLSQI-TDYKQLTDMAQHGDRNTIDLK-VRHIYKDTEPPIPGDLTAANFGHVLHHLDADFTPSN 211 (287)
T ss_dssp EEEESCSHHHHHHHHHHHHCC-CCHHHHHHHHTTCCCTTTCEE-TTTC-------CCTTSEEETTTTGGGCTTSCCCHHH
T ss_pred cCccccchhhHHHHHHHHhCC-CCHHHHHHHHHcCCccccccc-hhhhcCCCCCCcCcchhhHHHHHHHHHHhCCCCHHH
Confidence 334555567778877777762 489999999864321 11111 1111111111112222333233 234679999
Q ss_pred HHHHHHhhhhHHHHHHHHHHHHhcCCCCceEEEEcC-CccChHHHHHHhhh---cCCceEecCC
Q psy1586 371 IVKAALEAVCFQTRDILEAMKEDCGVALEKLLVDGG-MTANKYLMQLQADL---TGTPVSSSPI 430 (431)
Q Consensus 371 ~~rA~~Egia~~~r~~~~~l~~~~g~~~~~i~~~GG-~~~s~~~~qi~Adv---lg~pv~~~~~ 430 (431)
++++++.+++..+..+.....+.. ++++|+++|| .+.|+.+++.+++. ++.++..++.
T Consensus 212 Iaasl~~sV~~~I~~la~~~a~~~--~i~~Vvf~Gg~l~~n~~l~~~l~~~~~~~~~~~~~p~~ 273 (287)
T 2ews_A 212 KLAAVIGVVGEVVTTMAITVAREF--KTENIVYIGSSFHNNALLRKVVEDYTVLRGCKPYYVEN 273 (287)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHT--TCCEEEEESGGGTTCHHHHHHHHHHHHHTTCEEEECTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhC--CCCeEEEeCCchhcCHHHHHHHHHHHhhCCceEEECCC
Confidence 999999999887766554433323 4557999999 89999999999998 5888887764
No 22
>2i7n_A Pantothenate kinase 1; PANK, transferase; HET: ACO; 1.90A {Homo sapiens} SCOP: c.55.1.14 c.55.1.14 PDB: 3smp_A* 3sms_A* 2i7p_A* 3mk6_A*
Probab=97.03 E-value=0.0035 Score=59.86 Aligned_cols=131 Identities=18% Similarity=0.133 Sum_probs=79.3
Q ss_pred EEEcccccchhhH-HHHHHHHcCCCCCHHHHHHHHHhcCC-CCCeEEEeCCCCCCCC--CCCCCCceeEecCC------C
Q psy1586 295 YALEGSIAVAGQT-FKWLRDNLNIIADLNEIESLVQKSSS-HTDVVFVPAFSGLYAP--YWQRDARSIICGLT------D 364 (431)
Q Consensus 295 ~~~~~~~~~~G~~-~~w~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~P~~~G~r~p--~~~~~~~g~~~gl~------~ 364 (431)
|...+++..||.. +.-.+ .+-...+|+++.+++.+-.. .-++++ =.+.|...+ ....+..++-+|-. .
T Consensus 197 f~rvgG~siGGGTflGL~~-lLtg~~~~dEl~~lA~~Gd~~~vDllV-~DIYg~~y~~~gL~~~~~ASsFGk~~~~~~~~ 274 (360)
T 2i7n_A 197 YKRVTGTSLGGGTFLGLCC-LLTGCETFEEALEMAAKGDSTNVDKLV-KDIYGGDYERFGLQGSAVASSFGNMMSKEKRD 274 (360)
T ss_dssp EEEEEEESCSHHHHHHHHH-HHHCCCSHHHHHHHHHHCCGGGTSEEH-HHHHSSCBGGGTBCTTSEEETTTTTTSHHHHT
T ss_pred EEEeccccCccHhHHHHHH-HHhCCCCHHHHHHHHHcCCCCccccee-eecccCcccccCCCccceeehhhhHhhHhhhc
Confidence 4333444444444 44444 44113599999999865431 112221 122221111 12234444444433 2
Q ss_pred CCCHHHHHHHHHhhhhHHHHHHHHHHHHhcCCCCceEEEEcC-CccChHHHHHHhhhcC------CceEecC
Q psy1586 365 ETSKVDIVKAALEAVCFQTRDILEAMKEDCGVALEKLLVDGG-MTANKYLMQLQADLTG------TPVSSSP 429 (431)
Q Consensus 365 ~~~~~~~~rA~~Egia~~~r~~~~~l~~~~g~~~~~i~~~GG-~~~s~~~~qi~Advlg------~pv~~~~ 429 (431)
..+++|++++++.+++..+..+.-...+..+. ++|+++|| .++|+..+++++..++ +++..++
T Consensus 275 ~~~~eDIa~gll~sVa~~I~~lA~l~A~~~~i--~~IvftGgfla~n~~~~~~L~~~l~~ws~g~~~~~~~~ 344 (360)
T 2i7n_A 275 SISKEDLARATLVTITNNIGSIARMCALNENI--DRVVFVGNFLRINMVSMKLLAYAMDFWSKGQLKALFLE 344 (360)
T ss_dssp TCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTC--CCEEEESGGGCSSSHHHHHHHHHHHHHTTTSCCEEEET
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCC--CeEEEeCcccccCHHHHHHHHHHHhhhhcCCeeEEEcC
Confidence 56899999999999999987764433333444 47999999 8999999999999985 6776664
No 23
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}
Probab=96.38 E-value=0.016 Score=53.21 Aligned_cols=58 Identities=12% Similarity=0.206 Sum_probs=43.9
Q ss_pred CHHHHHHHHHhhhhHHHHHHHHHHHHhcCCCCceEEEEcCCccChHHHHHHhhhcCCceEecC
Q psy1586 367 SKVDIVKAALEAVCFQTRDILEAMKEDCGVALEKLLVDGGMTANKYLMQLQADLTGTPVSSSP 429 (431)
Q Consensus 367 ~~~~~~rA~~Egia~~~r~~~~~l~~~~g~~~~~i~~~GG~~~s~~~~qi~Advlg~pv~~~~ 429 (431)
...++++.+++.++..++..++. .+ .++.|+++||+++++.+.+.+++.|+.||..+.
T Consensus 201 ~~~~~~~~~~~~i~~~i~~~l~~----~~-~~~~ivL~GG~a~~~~l~~~l~~~l~~~v~~~~ 258 (272)
T 3h1q_A 201 EIMRVVRPVIEKMALIVKEVIKN----YD-QTLPVYVVGGTAYLTGFSEEFSRFLGKEVQVPI 258 (272)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTT----SC-SSCCEEEESGGGGSTTHHHHHHHHHSSCCBCCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh----cC-CCCEEEEECCccchhhHHHHHHHHhCCCccccC
Confidence 34567777777766555544332 22 377999999999999999999999999998653
No 24
>3qbx_A Anhydro-N-acetylmuramic acid kinase; acetate and sugar kinases, HSP70, actin superfamily, anhydro-N-actetylmuramic acid binding; HET: AH0; 2.10A {Pseudomonas aeruginosa} PDB: 3qbw_A*
Probab=95.71 E-value=0.025 Score=54.04 Aligned_cols=61 Identities=28% Similarity=0.212 Sum_probs=48.2
Q ss_pred CCCHHHHHHHHHhhhhHHHHHHHHHHHHhcCCCCceEEEEcCCccChHHHHHHhhhcC-CceEecC
Q psy1586 365 ETSKVDIVKAALEAVCFQTRDILEAMKEDCGVALEKLLVDGGMTANKYLMQLQADLTG-TPVSSSP 429 (431)
Q Consensus 365 ~~~~~~~~rA~~Egia~~~r~~~~~l~~~~g~~~~~i~~~GG~~~s~~~~qi~Advlg-~pv~~~~ 429 (431)
..+++|+.+-+.|-.|..+...++.+ ..++++|+++|||++|+.+|+.++..+. .+|...+
T Consensus 255 ~ls~~Dv~ATLt~~TA~sIa~~~~~~----~~~~~~v~vcGGGa~N~~Lm~~L~~~l~~~~v~~~d 316 (371)
T 3qbx_A 255 ALPAADIQATLLELSARSISESLLDA----QPDCEEVLVCGGGAFNTALMKRLAMLMPEARVASTD 316 (371)
T ss_dssp -CCHHHHHHHHHHHHHHHHHHHHHHH----CTTCCEEEEESGGGGCHHHHHHHHHHCTTSEEEEGG
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHhc----cCCCceEEEECCccCcHHHHHHHHHhCCCCEEeCHH
Confidence 45799999999888887776666554 2356899999999999999999999884 7776543
No 25
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}
Probab=95.53 E-value=0.043 Score=51.74 Aligned_cols=81 Identities=16% Similarity=0.263 Sum_probs=58.3
Q ss_pred CCcEEEEEeCCCCeEEEEEEeecceecCCCCceeeCHHHHHHHHHHHHHHHHHhhhhcCCCCCCeeEEEEecccceEEEe
Q psy1586 1 MSKSTIVFAASTSELLTYHKVELETLTPKEGWVEQDPMVILHLVEECIEKCVGYLVDLDINPNDIVAIGITNQRETTIVW 80 (431)
Q Consensus 1 ~s~K~~l~d~~~g~~l~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~I~~I~is~~~~~~v~~ 80 (431)
.++|++++|. +|+++.+.+.+++. +++++++++.+.+.+++++++. +.++.+|.+|+|+..+ ++
T Consensus 16 t~~~~~l~d~-~g~il~~~~~~~~~--------~~~~~~~~~~l~~~i~~~~~~~---~~~~~~i~~igi~~pG----~v 79 (326)
T 2qm1_A 16 TTIKFAILTT-DGVVQQKWSIETNI--------LEDGKHIVPSIIESIRHRIDLY---NMKKEDFVGIGMGTPG----SV 79 (326)
T ss_dssp SEEEEEEEET-TCCEEEEEEEECCC--------TTTTTTHHHHHHHHHHHHHHHT---TCCGGGEEEEEEEESS----EE
T ss_pred CEEEEEEECC-CCCEEEEEEEcCCC--------CCCHHHHHHHHHHHHHHHHHHc---CCCccceeEEEEeccc----ce
Confidence 3689999994 99999887776542 2467889999999999887653 4445689999999765 35
Q ss_pred eCCCCccc-cccceecCc
Q psy1586 81 DSTTGKPL-YNAIVWSDV 97 (431)
Q Consensus 81 d~~~g~pl-~~~i~w~D~ 97 (431)
|.++|..+ .|.+.|.+.
T Consensus 80 d~~~g~v~~~~~l~w~~~ 97 (326)
T 2qm1_A 80 DIEKGTVVGAYNLNWTTV 97 (326)
T ss_dssp ETTTTEEECBGGGTBCSC
T ss_pred eCCCCEEEecCCCCccCC
Confidence 76456654 344568654
No 26
>1z05_A Transcriptional regulator, ROK family; structural genomics, protein structure initiative, midwest center for structural genomics; 2.00A {Vibrio cholerae o1 biovar eltor} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=95.51 E-value=0.073 Score=52.39 Aligned_cols=79 Identities=18% Similarity=0.140 Sum_probs=58.8
Q ss_pred CcEEEEEeCCCCeEEEEEEeecceecCCCCceeeCHHHHHHHHHHHHHHHHHhhhhcCCCCCCeeEEEEecccceEEEee
Q psy1586 2 SKSTIVFAASTSELLTYHKVELETLTPKEGWVEQDPMVILHLVEECIEKCVGYLVDLDINPNDIVAIGITNQRETTIVWD 81 (431)
Q Consensus 2 s~K~~l~d~~~g~~l~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~I~~I~is~~~~~~v~~d 81 (431)
++|++++|. +|+++.+.+.+++ .++++++++.+.+.+++++++. +.+..+|.+|+|+..+ ++|
T Consensus 119 ~i~~~l~d~-~G~il~~~~~~~~---------~~~~~~~~~~l~~~i~~~~~~~---~~~~~~i~gigi~~pG----~vd 181 (429)
T 1z05_A 119 YLTIALHEL-GGEVLIDTKIDIH---------EIDQDDVLARLLFEIEEFFQTY---AAQLDRVTSIAITLPG----LVN 181 (429)
T ss_dssp EEEEEEEET-TSCEEEEEEEECC---------CCBHHHHHHHHHHHHHHHHHHT---TTTCCEEEEEEEEESS----EEE
T ss_pred EEEEEEECC-CCCEEEEEEEcCC---------CCCHHHHHHHHHHHHHHHHHhc---CCCcCceEEEEEeccC----cEe
Confidence 689999995 9999988766643 1479999999999999987653 4455789999999766 457
Q ss_pred CCCCccc-cccceecCc
Q psy1586 82 STTGKPL-YNAIVWSDV 97 (431)
Q Consensus 82 ~~~g~pl-~~~i~w~D~ 97 (431)
.++|..+ .|.+.|.+-
T Consensus 182 ~~~g~v~~~~~l~w~~~ 198 (429)
T 1z05_A 182 SEQGIVLQMPHYNVKNL 198 (429)
T ss_dssp TTTTEEEECSSSBCSSB
T ss_pred CCCCeEeecCCCCCCCC
Confidence 6457655 355668764
No 27
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A
Probab=95.46 E-value=0.032 Score=51.38 Aligned_cols=108 Identities=18% Similarity=0.246 Sum_probs=73.4
Q ss_pred ccchhhHHHHHHHHcCCCCCHHHHHHHHHhcCCCCCeEEEeCCCCCCCCCCCCCCceeEe------cCCCCCCHHHHHHH
Q psy1586 301 IAVAGQTFKWLRDNLNIIADLNEIESLVQKSSSHTDVVFVPAFSGLYAPYWQRDARSIIC------GLTDETSKVDIVKA 374 (431)
Q Consensus 301 ~~~~G~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~P~~~G~r~p~~~~~~~g~~~------gl~~~~~~~~~~rA 374 (431)
...+|..++-+.+.++. +|++..+++....... | +. .+ ..+|. -+....+++|++++
T Consensus 126 ~~g~G~f~d~~a~~l~~--~~~~~~~~~~~a~~~~-----~-i~-~~--------~~~f~~s~~~~~~~~~~~~~di~a~ 188 (276)
T 4ehu_A 126 AAGTGRFLDVMAKIIEV--DVSELGSISMNSQNEV-----S-IS-ST--------CTVFAESEVISHLSENAKIEDIVAG 188 (276)
T ss_dssp STTSHHHHHHHHHHHTC--CGGGHHHHHTTCSSCC-----C-CC-CC--------SHHHHHHHHHHHHHTTCCHHHHHHH
T ss_pred CcchhhHHHHHHHHhcc--ChhhhHHHHhcCCCCC-----C-cC-Cc--------cchhhhhHHHHhhhccccHHHHHHH
Confidence 34457788888888876 7887777765432111 0 11 11 11121 12235678999999
Q ss_pred HHhhhhHHHHHHHHHHHHhcCCCCceEEEEcCCccChHHHHHHhhhcCCceEecCC
Q psy1586 375 ALEAVCFQTRDILEAMKEDCGVALEKLLVDGGMTANKYLMQLQADLTGTPVSSSPI 430 (431)
Q Consensus 375 ~~Egia~~~r~~~~~l~~~~g~~~~~i~~~GG~~~s~~~~qi~Advlg~pv~~~~~ 430 (431)
+++.++-.+... ..+. ...++|+++||.++|+.+++.+++.||+++.+++.
T Consensus 189 ~~~~v~~~l~~~---~~~~--~~~~~vvl~GGva~n~~lr~~l~~~~g~~~~~p~~ 239 (276)
T 4ehu_A 189 IHTSVAKRVSSL---VKRI--GVQRNVVMVGGVARNSGIVRAMAREINTEIIVPDI 239 (276)
T ss_dssp HHHHHHHHHHHH---HHHH--CCCSSEEEESGGGGCHHHHHHHHHHHTSCEECCSS
T ss_pred HHHHHHHHHHHH---HHhc--ccCCeEEEecCccchHHHHHHHHHHHCCCeeeCCC
Confidence 999987665443 3332 24578999999999999999999999999988763
No 28
>1z6r_A MLC protein; transcriptional repressor, ROK family protein, DNA binding P helix-turn-helix, phosphotransferase system; 2.70A {Escherichia coli} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 PDB: 3bp8_A
Probab=95.25 E-value=0.041 Score=53.77 Aligned_cols=79 Identities=15% Similarity=0.098 Sum_probs=57.0
Q ss_pred CcEEEEEeCCCCeEEEEEEeecceecCCCCceeeCHHHHHHHHHHHHHHHHHhhhhcCCCCCCeeEEEEecccceEEEee
Q psy1586 2 SKSTIVFAASTSELLTYHKVELETLTPKEGWVEQDPMVILHLVEECIEKCVGYLVDLDINPNDIVAIGITNQRETTIVWD 81 (431)
Q Consensus 2 s~K~~l~d~~~g~~l~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~I~~I~is~~~~~~v~~d 81 (431)
++|++++|. +|+++.+.+.+++ +++++++++.+.+++++++++. +.++.+|.+|+|+..+ ++|
T Consensus 96 ~i~~~l~d~-~G~il~~~~~~~~---------~~~~~~~~~~l~~~i~~~~~~~---~~~~~~i~gigi~~pG----~vd 158 (406)
T 1z6r_A 96 EIFLALRDL-SSKLVVEESQELA---------LKDDLPLLDRIISHIDQFFIRH---QKKLERLTSIAITLPG----IID 158 (406)
T ss_dssp EEEEEEEET-TCCEEEEEEEECC---------SSCSSCHHHHHHHHHHHHHHHT---GGGCCCEEEEEEEESS----EEE
T ss_pred EEEEEEEcC-CCCEEEEEEecCC---------CCCHHHHHHHHHHHHHHHHHhc---CCCcCceeEEEEEeec----CEe
Confidence 689999995 9999988776652 3577889999999999887653 3345789999999776 357
Q ss_pred CCCCcccc-ccc-eecCc
Q psy1586 82 STTGKPLY-NAI-VWSDV 97 (431)
Q Consensus 82 ~~~g~pl~-~~i-~w~D~ 97 (431)
.++|..+. +.+ -|.+.
T Consensus 159 ~~~g~v~~~~~l~~w~~~ 176 (406)
T 1z6r_A 159 TENGIVHRMPFYEDVKEM 176 (406)
T ss_dssp TTTTEEEECTTCTTCSSB
T ss_pred CCCCEEecCCCCCCccCC
Confidence 64576553 333 47654
No 29
>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=94.97 E-value=0.071 Score=51.59 Aligned_cols=80 Identities=13% Similarity=0.184 Sum_probs=58.1
Q ss_pred CcEEEEEeCCCCeEEEEEEeecceecCCCCceeeCHHHHHHHHHHHHHHHHHhhhhcCCCCCCeeEEEEecccceEEEee
Q psy1586 2 SKSTIVFAASTSELLTYHKVELETLTPKEGWVEQDPMVILHLVEECIEKCVGYLVDLDINPNDIVAIGITNQRETTIVWD 81 (431)
Q Consensus 2 s~K~~l~d~~~g~~l~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~I~~I~is~~~~~~v~~d 81 (431)
++|++++|. +|+++...+.+++. +++++++++.+.+.+++++++. +.+..+|.+|+|+..+ ++|
T Consensus 98 ~i~~~l~d~-~G~vl~~~~~~~~~--------~~~~~~~~~~l~~~i~~~~~~~---~~~~~~i~gigi~~pG----~vd 161 (380)
T 2hoe_A 98 EIAACLIDA-SMNILAHEAHPLPS--------QSDREETLNVMYRIIDRAKDMM---EKLGSKLSALTVAAPG----PID 161 (380)
T ss_dssp EEEEEEEET-TCCEEEEEEEECCS--------SCCHHHHHHHHHHHHHHHHHHH---HHTTCCCCEEEEEESS----CEE
T ss_pred EEEEEEECC-CCCEEEEEEEccCC--------CCCHHHHHHHHHHHHHHHHHhc---CCCcCcEEEEEEEeec----cEE
Confidence 689999995 99999887776532 3589999999999999987654 2234679999998766 356
Q ss_pred CCCCccc-cccceecCc
Q psy1586 82 STTGKPL-YNAIVWSDV 97 (431)
Q Consensus 82 ~~~g~pl-~~~i~w~D~ 97 (431)
.++|..+ .|.+.|.+.
T Consensus 162 ~~~g~v~~~~~l~w~~~ 178 (380)
T 2hoe_A 162 TERGIIIDPRNFPLSQI 178 (380)
T ss_dssp TTTTEECCCSSCTTBTS
T ss_pred CCCCEEeccCCCCCcCC
Confidence 5457655 344567654
No 30
>3cqy_A Anhydro-N-acetylmuramic acid kinase; APC7501, SO_1313, structural genomics, PSI-2, shewanella one MR-1, protein structure initiative; 2.30A {Shewanella oneidensis}
Probab=94.95 E-value=0.051 Score=51.88 Aligned_cols=58 Identities=26% Similarity=0.324 Sum_probs=46.4
Q ss_pred CCHHHHHHHHHhhhhHHHHHHHHHHHHhcCCCCceEEEEcCCccChHHHHHHhhhc-CCceEec
Q psy1586 366 TSKVDIVKAALEAVCFQTRDILEAMKEDCGVALEKLLVDGGMTANKYLMQLQADLT-GTPVSSS 428 (431)
Q Consensus 366 ~~~~~~~rA~~Egia~~~r~~~~~l~~~~g~~~~~i~~~GG~~~s~~~~qi~Advl-g~pv~~~ 428 (431)
.+++|+.+-+.|-.|..+...++.+ . ..++|+++|||++|+.+|+.++..+ +.+|...
T Consensus 263 l~~~Dv~ATLt~~TA~sIa~~~~~~----~-~~~~v~vcGGGa~N~~Lm~~L~~~l~~~~v~~t 321 (370)
T 3cqy_A 263 LNEEDIQSTLLDLTCHSIAQDILKL----A-QEGELFVCGGGAFNAELMQRLAALLPGYRIDTT 321 (370)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHH----C-SSEEEEEESGGGGCHHHHHHHHHHCTTEEEEEG
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHhc----C-CCCEEEEECCCcCCHHHHHHHHHhCCCCeeeeH
Confidence 3689999999888887777666554 2 4569999999999999999999998 4566543
No 31
>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus}
Probab=94.79 E-value=0.12 Score=48.89 Aligned_cols=75 Identities=13% Similarity=0.037 Sum_probs=55.2
Q ss_pred CcEEEEEeCCCCeEEEEEEeecceecCCCCceeeCHHHHHHHHHHHHHHHHHhhhhcCCCCCCeeEEEEecccceEEEee
Q psy1586 2 SKSTIVFAASTSELLTYHKVELETLTPKEGWVEQDPMVILHLVEECIEKCVGYLVDLDINPNDIVAIGITNQRETTIVWD 81 (431)
Q Consensus 2 s~K~~l~d~~~g~~l~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~I~~I~is~~~~~~v~~d 81 (431)
++|++++|. +|+++.+.+.+++ ..+++++++.+.+.++++.+.. ..+.+|+|+..+ ++|
T Consensus 35 ~i~~~l~d~-~G~il~~~~~~~~---------~~~~~~~~~~i~~~i~~~~~~~-------~~~~gigi~~pG----~vd 93 (327)
T 4db3_A 35 KIEFGAFNE-KLERVATERVPTP---------TDDYPLLLETIAGLVAKYDQEF-------ACEGKIGLGLPG----MED 93 (327)
T ss_dssp EEEEEEECT-TCCEEEEEEEECC---------TTCHHHHHHHHHHHHHHHHHHH-------TSCCEEEEEESE----EEC
T ss_pred EEEEEEEeC-CCcEEEEEEecCC---------CCCHHHHHHHHHHHHHHHHHhc-------CCccEEEEEeec----cEe
Confidence 589999994 9999988776643 1278999999999998887652 247788888654 467
Q ss_pred CCCCccccccceecCc
Q psy1586 82 STTGKPLYNAIVWSDV 97 (431)
Q Consensus 82 ~~~g~pl~~~i~w~D~ 97 (431)
.++|....+.+.|.+.
T Consensus 94 ~~~g~v~~~~~~~~~~ 109 (327)
T 4db3_A 94 ADDATVLTVNVPAAKG 109 (327)
T ss_dssp TTTCCEEESSSGGGTT
T ss_pred CCCCEEEcCCCccccC
Confidence 5468777676777443
No 32
>2yhw_A Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase; transferase, sialic acid, mannac, ROK family; HET: BM3 2PE; 1.64A {Homo sapiens} PDB: 2yhy_A* 2yi1_A* 3eo3_A
Probab=94.71 E-value=0.098 Score=49.75 Aligned_cols=79 Identities=13% Similarity=0.131 Sum_probs=55.5
Q ss_pred CCcEEEEEeCCCCeEEEEEEeecceecCCCCceeeCHHHHHHHHHHHHHHHHHhhhhcCCCCCCeeEEEEecccceEEEe
Q psy1586 1 MSKSTIVFAASTSELLTYHKVELETLTPKEGWVEQDPMVILHLVEECIEKCVGYLVDLDINPNDIVAIGITNQRETTIVW 80 (431)
Q Consensus 1 ~s~K~~l~d~~~g~~l~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~I~~I~is~~~~~~v~~ 80 (431)
.++|++++|. +|+++.+.+.+.+ ++++++++.+.+.+++++++.. ....+|.+|+|+..+ ++
T Consensus 40 t~i~~~l~d~-~G~il~~~~~~~~----------~~~~~~~~~i~~~i~~~~~~~~---~~~~~i~gigi~~pG----~v 101 (343)
T 2yhw_A 40 TNLRVAIVSM-KGEIVKKYTQFNP----------KTYEERINLILQMCVEAAAEAV---KLNCRILGVGISTGG----RV 101 (343)
T ss_dssp SEEEEEEEET-TSCEEEEEEEECC----------SSHHHHHHHHHHHHHHHHHHHH---HTTEEEEEEEEEESS----EE
T ss_pred CEEEEEEECC-CCcEEEEEEEcCC----------CCHHHHHHHHHHHHHHHHHhcc---cccCceEEEEEeccc----CE
Confidence 3689999994 9999987765432 3788999999999988876532 124579999999776 45
Q ss_pred eCCCCcccc-ccc--eecCc
Q psy1586 81 DSTTGKPLY-NAI--VWSDV 97 (431)
Q Consensus 81 d~~~g~pl~-~~i--~w~D~ 97 (431)
|.++|..+. +.+ -|.+.
T Consensus 102 d~~~g~v~~~~~~~~~w~~~ 121 (343)
T 2yhw_A 102 NPREGIVLHSTKLIQEWNSV 121 (343)
T ss_dssp ETTTTEEEECCTTSSSCSSE
T ss_pred eCCCCEEEeCCcCCCCCcCC
Confidence 764576653 223 57654
No 33
>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A*
Probab=94.65 E-value=0.057 Score=50.91 Aligned_cols=75 Identities=17% Similarity=0.184 Sum_probs=54.3
Q ss_pred CCcEEEEEeCCCCeEEEEEEeecceecCCCCceeeCHHHHHHHHHHHHHHHHHhhhhcCCCCCCeeEEEEecccceEEEe
Q psy1586 1 MSKSTIVFAASTSELLTYHKVELETLTPKEGWVEQDPMVILHLVEECIEKCVGYLVDLDINPNDIVAIGITNQRETTIVW 80 (431)
Q Consensus 1 ~s~K~~l~d~~~g~~l~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~I~~I~is~~~~~~v~~ 80 (431)
.++|++++| .+|+++.+.+.++ +++++++++.+.+.++++.+. .+|.+|+|+..+ ++
T Consensus 12 t~i~~~l~d-~~G~i~~~~~~~~----------~~~~~~~~~~i~~~i~~~~~~--------~~i~gigi~~pG----~v 68 (321)
T 3vgl_A 12 TKIAAGVVD-EEGRILSTFKVAT----------PPTAEGIVDAICAAVAGASEG--------HDVEAVGIGAAG----YV 68 (321)
T ss_dssp SEEEEEEEC-TTCCBCCCEEEEC----------CSSHHHHHHHHHHHHHHHHTT--------CCEEEEEEEESS----EE
T ss_pred CEEEEEEEC-CCCCEEEEEEeeC----------CCCHHHHHHHHHHHHHHHHhh--------cCceEEEEeccc----cE
Confidence 368999999 4999998766654 257999999999999887542 479999999765 46
Q ss_pred eCCCCccc-cccceecCcc
Q psy1586 81 DSTTGKPL-YNAIVWSDVR 98 (431)
Q Consensus 81 d~~~g~pl-~~~i~w~D~R 98 (431)
|.++|... .|.+.|.+..
T Consensus 69 d~~~g~v~~~~~l~w~~~~ 87 (321)
T 3vgl_A 69 DDKRATVLFAPNIDWRHEP 87 (321)
T ss_dssp CTTSSCEEECSSSCCEEEC
T ss_pred eCCCCEEEeCCCCCCcCCC
Confidence 76445543 2445776653
No 34
>3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii}
Probab=94.16 E-value=0.097 Score=49.32 Aligned_cols=77 Identities=10% Similarity=-0.012 Sum_probs=55.1
Q ss_pred CcEEEEEeCCCCeEEEEEEeecceecCCCCceeeCHHHHHHHHHHHHHHHHHhhhhcCCCCCCeeEEEEecccceEEEee
Q psy1586 2 SKSTIVFAASTSELLTYHKVELETLTPKEGWVEQDPMVILHLVEECIEKCVGYLVDLDINPNDIVAIGITNQRETTIVWD 81 (431)
Q Consensus 2 s~K~~l~d~~~g~~l~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~I~~I~is~~~~~~v~~d 81 (431)
++|++++|. +|+++.+.+.+++. ..+++++++.+.+.++++++. ..+|.+|+|+..+ ++|
T Consensus 30 ~i~~~l~d~-~g~il~~~~~~~~~--------~~~~~~~~~~i~~~i~~~~~~-------~~~i~gigi~~pG----~vd 89 (321)
T 3r8e_A 30 SVKFGLVTP-EGEIQNATRFMTAD--------WVNGIGFVESMKLEIGNFLKQ-------YPIVKGVGIGWPG----LVS 89 (321)
T ss_dssp EEEEEEECT-TCCEEEEEEEEHHH--------HHTTTCHHHHHHHHHHHHHHH-------CTTCCEEEEEESS----EEC
T ss_pred EEEEEEEcC-CCcEEEEEEEeCCC--------CCCHHHHHHHHHHHHHHHHhc-------cCCeeEEEEEecc----cEE
Confidence 689999994 99999988777652 236778888888888887652 3678999998765 457
Q ss_pred CCCCcccccc-ce-ecCcc
Q psy1586 82 STTGKPLYNA-IV-WSDVR 98 (431)
Q Consensus 82 ~~~g~pl~~~-i~-w~D~R 98 (431)
.++|..+... +. |.+-.
T Consensus 90 ~~~g~v~~~~~l~~w~~~~ 108 (321)
T 3r8e_A 90 LDRTKVILLPNIPSVVNVP 108 (321)
T ss_dssp TTSCCEEEBTTBCCCCSCC
T ss_pred CCCCEEEeCCCCccccCCC
Confidence 5467766433 43 87754
No 35
>3htv_A D-allose kinase, allokinase; NP_418508.1, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Escherichia coli k-12}
Probab=92.95 E-value=0.077 Score=49.81 Aligned_cols=76 Identities=7% Similarity=-0.030 Sum_probs=51.3
Q ss_pred CcEEEEEeCCCCeEEEEEEeecceecCCCCceeeCHHHHHHHHHHHHHHHHHhhhhcCCCCCCeeEEEEecccceEEEee
Q psy1586 2 SKSTIVFAASTSELLTYHKVELETLTPKEGWVEQDPMVILHLVEECIEKCVGYLVDLDINPNDIVAIGITNQRETTIVWD 81 (431)
Q Consensus 2 s~K~~l~d~~~g~~l~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~I~~I~is~~~~~~v~~d 81 (431)
++|++++| .+|+++.+.+.+.+. .+++.+++.+.+.++++.+.. ..+|.+|||+..+ ++|
T Consensus 18 ~i~~~l~d-~~G~il~~~~~~~~~---------~~~~~~~~~i~~~i~~~~~~~------~~~i~gigi~~pG----~vd 77 (310)
T 3htv_A 18 HIRFCLRT-AEGETLHCEKKRTAE---------VIAPGLVSGIGEMIDEQLRRF------NARCHGLVMGFPA----LVS 77 (310)
T ss_dssp EEEEEEEE-TTSCEEEEEEEEHHH---------HHTTCHHHHHHHHHHHHHHHH------TEEEEEEEEEESS----CBC
T ss_pred EEEEEEEC-CCCCEEEEEEecCcc---------ccHHHHHHHHHHHHHHHHHhc------CCCeeEEEEeccc----cEe
Confidence 68999999 499999887766531 234567788888777766542 1368899998665 357
Q ss_pred CCCCcccc-ccceecCc
Q psy1586 82 STTGKPLY-NAIVWSDV 97 (431)
Q Consensus 82 ~~~g~pl~-~~i~w~D~ 97 (431)
.++|..+. |-+.|.+.
T Consensus 78 ~~~g~v~~~~~l~~~~~ 94 (310)
T 3htv_A 78 KDKRTIISTPNLPLTAA 94 (310)
T ss_dssp TTSSCBCSCCSSSCCHH
T ss_pred CCCCEEEeCCCCCCccc
Confidence 64566553 44667653
No 36
>3eno_A Putative O-sialoglycoprotein endopeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc, keops complex, ATPase, metal ION binding; 3.02A {Thermoplasma acidophilum}
Probab=92.64 E-value=0.3 Score=46.26 Aligned_cols=62 Identities=19% Similarity=0.269 Sum_probs=52.2
Q ss_pred CCHHHHHHHHHhhhhHHHHHHHHHHHHhcCCCCceEEEEcCCccChHHHHHHhhhc---CCceEecC
Q psy1586 366 TSKVDIVKAALEAVCFQTRDILEAMKEDCGVALEKLLVDGGMTANKYLMQLQADLT---GTPVSSSP 429 (431)
Q Consensus 366 ~~~~~~~rA~~Egia~~~r~~~~~l~~~~g~~~~~i~~~GG~~~s~~~~qi~Advl---g~pv~~~~ 429 (431)
..++++.+++.++++-.+...++...+.++ .++|+++||.+.|..+++.+.+.+ |.+|.+++
T Consensus 220 ~~~~diAasfq~~l~~~l~~~~~~a~~~~g--~~~vvlsGGVa~N~~L~~~L~~~l~~~g~~v~~p~ 284 (334)
T 3eno_A 220 QAIEDISYSIQETAFAMLVEVLERALYVSG--KDEILMAGGVALNRRLRDMVTNMAREAGIRSYLTD 284 (334)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHT--CSEEEEESSGGGCHHHHHHHHHHHHHHTSEEECCC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHcC--CCeEEEcCCHHHHHHHHHHHHHHHHHcCCEEEecC
Confidence 468899999999999888888877665554 578999999999999999999887 77887765
No 37
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}
Probab=92.02 E-value=0.28 Score=47.09 Aligned_cols=62 Identities=19% Similarity=0.176 Sum_probs=50.5
Q ss_pred CHHHHHHHHHhhhhHHHHHHHHHHHHhc-CCCCceEEEEcCCccChHHHHHHhhhcCCceEec
Q psy1586 367 SKVDIVKAALEAVCFQTRDILEAMKEDC-GVALEKLLVDGGMTANKYLMQLQADLTGTPVSSS 428 (431)
Q Consensus 367 ~~~~~~rA~~Egia~~~r~~~~~l~~~~-g~~~~~i~~~GG~~~s~~~~qi~Advlg~pv~~~ 428 (431)
...++++..++.++-.++..++.+.... ...++.|+++||+++.+.+.+.+++.|+.||.+.
T Consensus 275 ~~~~~i~~~~~~i~~~i~~~l~~~~~~~~~~~~~~IvL~GG~s~~p~l~~~l~~~l~~~v~~~ 337 (377)
T 2ych_A 275 RIYDAIRPVLVELTQELRRSLEFFRIQLEEASPEVGYLLGGGSKLRGLASLLTDTLGVNLEPV 337 (377)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHC---CCSEEEEESGGGGSTTHHHHHHHHHTSEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcCEEEEECccccchhHHHHHHHHhCCCeEec
Confidence 3567778888999888888888764222 3468999999999999999999999999999875
No 38
>2ivn_A O-sialoglycoprotein endopeptidase; UP1 keops complex, Fe/Zn dependent nucleotide phosphatase, metalloprotease, hypothetical protein, zinc; HET: ANP; 1.65A {Pyrococcus abyssi} PDB: 2ivo_A 2ivp_A*
Probab=91.93 E-value=0.4 Score=45.32 Aligned_cols=114 Identities=17% Similarity=0.184 Sum_probs=73.9
Q ss_pred chhhHHHHHHHHcCCCCC-HHHHHHHHHhcCCCCCeEEEeCCCCCCCCCCCCCCceeEecC--------CCC-CCHHHHH
Q psy1586 303 VAGQTFKWLRDNLNIIAD-LNEIESLVQKSSSHTDVVFVPAFSGLYAPYWQRDARSIICGL--------TDE-TSKVDIV 372 (431)
Q Consensus 303 ~~G~~~~w~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~P~~~G~r~p~~~~~~~g~~~gl--------~~~-~~~~~~~ 372 (431)
+.|..++.+...++.... --++++++..- ... +-+|+... +..=.|.|+ ... .+++++.
T Consensus 153 s~Gr~fD~vA~~LGl~~~~~~~le~lA~~g--~~~-~~~p~~i~--------~~~fsfs~l~~~v~~~~~~g~~~~~diA 221 (330)
T 2ivn_A 153 GIGNAIDVFARELGLGFPGGPKVEKLAEKG--EKY-IELPYAVK--------GMDLSFSGLLTEAIRKYRSGKYRVEDLA 221 (330)
T ss_dssp CHHHHHHHHHHHHTCCSCHHHHHHHHHHTC--CSC-CCCCCCEE--------TTEECCHHHHHHHHHHHHHTCSCHHHHH
T ss_pred hhHHHHHHHHHHhCCCCCcHHHHHHHhhcC--CCc-CCCCcccC--------CCeEehHHHHHHHHHHHHcCCCCHHHHH
Confidence 569999999988886211 12567776532 111 01232110 000011111 111 4689999
Q ss_pred HHHHhhhhHHHHHHHHHHHHhcCCCCceEEEEcCCccChHHHHHHhhhc---CCceEecC
Q psy1586 373 KAALEAVCFQTRDILEAMKEDCGVALEKLLVDGGMTANKYLMQLQADLT---GTPVSSSP 429 (431)
Q Consensus 373 rA~~Egia~~~r~~~~~l~~~~g~~~~~i~~~GG~~~s~~~~qi~Advl---g~pv~~~~ 429 (431)
+++.+.++-.+...++.+.+.++ .++|+++||.+.|..+++.+.+.+ |.+|.+++
T Consensus 222 a~fq~~l~~~l~~~~~~~~~~~~--~~~vvlsGGVa~N~~l~~~l~~~l~~~g~~v~~p~ 279 (330)
T 2ivn_A 222 YSFQETAFAALVEVTERAVAHTE--KDEVVLVGGVAANNRLREMLRIMTEDRGIKFFVPP 279 (330)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHC--CSEEEEESGGGGCHHHHHHHHHHHHHHTCEEECCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhC--CCeEEEEccHHHHHHHHHHHHHHHHHcCCEEEecC
Confidence 99999999988888887765444 568999999999999999999877 67777654
No 39
>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A*
Probab=91.88 E-value=0.41 Score=45.30 Aligned_cols=65 Identities=6% Similarity=0.095 Sum_probs=48.4
Q ss_pred CCcEEEEEeCCCCeEEEEEEeecceecCCCCceeeCHHHHHHHHHHHHHHHHHhhhhcCCCCC-CeeEEEEecccc
Q psy1586 1 MSKSTIVFAASTSELLTYHKVELETLTPKEGWVEQDPMVILHLVEECIEKCVGYLVDLDINPN-DIVAIGITNQRE 75 (431)
Q Consensus 1 ~s~K~~l~d~~~g~~l~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~l~~~~~~~~~~~~~~~-~I~~I~is~~~~ 75 (431)
.++|++++| .+|+++.+.+.+. ....+++++++|+.+.+++++++++. +.++. +|.+|+|+..+.
T Consensus 16 t~~~~~l~d-~~g~i~~~~~~~~------~~~~~~~~~~~~~~i~~~i~~~~~~~---~~~~~~~i~gigi~~pG~ 81 (347)
T 2ch5_A 16 TRSEVLLVS-EDGKILAEADGLS------TNHWLIGTDKCVERINEMVNRAKRKA---GVDPLVPLRSLGLSLSGG 81 (347)
T ss_dssp TCEEEEEEE-TTSCEEEEEEECC------CCHHHHCHHHHHHHHHHHHHHHHHHH---TCCTTCCBSEEEEEETTT
T ss_pred cceEEEEEe-CCCCEEEEEeCCC------CCcccCCHHHHHHHHHHHHHHHHHhc---CCCcccceeEEEEeccCC
Confidence 368999999 4999998765531 12234689999999999999987653 34445 799999887663
No 40
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5
Probab=91.24 E-value=0.19 Score=46.11 Aligned_cols=58 Identities=12% Similarity=0.086 Sum_probs=39.9
Q ss_pred CCcEEEEEeCCCCeEEEEEEeecceecCCCCceeeCHHHHHHHHHHHHHHHHHhhhhcCCCCCCeeEEEEecccce
Q psy1586 1 MSKSTIVFAASTSELLTYHKVELETLTPKEGWVEQDPMVILHLVEECIEKCVGYLVDLDINPNDIVAIGITNQRET 76 (431)
Q Consensus 1 ~s~K~~l~d~~~g~~l~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~I~~I~is~~~~~ 76 (431)
.++|++|+| ++|++++..+.+++. ||. +++.++++++.+ .+++..+|.+|++|++++.
T Consensus 13 t~~k~~l~d-~~g~i~~~~~~~~~~----------~~~---~~~~~~l~~l~~----~~~~~~~i~~i~~TG~g~~ 70 (270)
T 1hux_A 13 TASKCIILK-DGKEIVAKSLVAVGT----------GTS---GPARSISEVLEN----AHMKKEDMAFTLATGYGRN 70 (270)
T ss_dssp SEEEEEEEE-TTTEEEEEEEEECCS----------SCC---HHHHHHHHHHHH----HTCCGGGCSEEEEESTTTT
T ss_pred ceEEEEEEe-CCCCEEEEEEecCCC----------CHH---HHHHHHHHHHHH----cCCChhHEEEEEEeCcccc
Confidence 368999999 599999988776532 222 455555666543 1234567899999999764
No 41
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A*
Probab=90.94 E-value=0.28 Score=48.03 Aligned_cols=62 Identities=13% Similarity=0.182 Sum_probs=47.0
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHh-----cCCCCceEEEEcCCccChHHHHHHhhhcCCceEecC
Q psy1586 368 KVDIVKAALEAVCFQTRDILEAMKED-----CGVALEKLLVDGGMTANKYLMQLQADLTGTPVSSSP 429 (431)
Q Consensus 368 ~~~~~rA~~Egia~~~r~~~~~l~~~-----~g~~~~~i~~~GG~~~s~~~~qi~Advlg~pv~~~~ 429 (431)
..+++++.+|-+.-.++..++...-. ....++.|+++||+++-+.+.+++++.||+||++..
T Consensus 294 l~~ii~p~veei~~~V~~~L~~~~~~~p~~~~~~~~~~IvLtGG~s~lpgl~e~~~~~~g~~vri~~ 360 (419)
T 4a2a_A 294 LSVIIHARLREIMSKSKKFFREVEAKIVEEGEIGIPGGVVLTGGGAKIPRINELATEVFKSPVRTGC 360 (419)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCC--------TTCEEEESGGGGSTTHHHHHHHHHTSCEEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCcccccccccCCEEEEECchhchhhHHHHHHHHHCCCeEEEe
Confidence 45667788888887777777765310 123467899999999999999999999999998654
No 42
>3ttc_A HYPF, transcriptional regulatory protein; Zn finger, nucleotide binding, hydrogenase maturation factor transferase; HET: ADP; 1.86A {Escherichia coli} PDB: 3tsp_A* 3tsu_A* 3ttf_A* 3ttd_A 3tsq_A
Probab=89.87 E-value=0.86 Score=47.00 Aligned_cols=120 Identities=13% Similarity=0.070 Sum_probs=76.4
Q ss_pred ccchhhHHHHHHHHcCCC-C--CHH-----HHHHHHHhcCCCCCeEEEeCC-CCCCCCCCCCCCceeEecC-CCCCCHHH
Q psy1586 301 IAVAGQTFKWLRDNLNII-A--DLN-----EIESLVQKSSSHTDVVFVPAF-SGLYAPYWQRDARSIICGL-TDETSKVD 370 (431)
Q Consensus 301 ~~~~G~~~~w~~~~~~~~-~--~~~-----~~~~~~~~~~~~~~l~~~P~~-~G~r~p~~~~~~~g~~~gl-~~~~~~~~ 370 (431)
+++.|.+|+-+...+|.. . +|+ ++++++.+.... .+-+|+- .+ ...| .++.+..+ ....++++
T Consensus 502 tSS~GRLFDavAalLGl~~~~~~YEGqaA~~LEalA~~~~~~--~~~lp~~i~~---~~ld--~s~l~~~ll~~g~~~~d 574 (657)
T 3ttc_A 502 ASSCGRLFDAVAAALGCAPATLSYEGEAACALEALAASCDGV--THPVTMPRVD---NQLD--LATFWQQWLNWQAPVNQ 574 (657)
T ss_dssp EEEHHHHHHHHHHHHTCSCSSCSSTTHHHHHHHHHHHTCCCC--CCCCCCCEET---TEEC--HHHHHHHHHTCCCCHHH
T ss_pred cCccchHHHHHHHHcCCCCccCccCchhHHHHHHHHhhCCCc--cCCceeeccC---Cccc--HHHHHHHHHHcCCCHHH
Confidence 355688888877777652 1 353 367776543211 0001121 11 0111 11211111 12457899
Q ss_pred HHHHHHhhhhHHHHHHHHHHHHhcCCCCceEEEEcCCccChHHHHHHhhhc-CCceEecC
Q psy1586 371 IVKAALEAVCFQTRDILEAMKEDCGVALEKLLVDGGMTANKYLMQLQADLT-GTPVSSSP 429 (431)
Q Consensus 371 ~~rA~~Egia~~~r~~~~~l~~~~g~~~~~i~~~GG~~~s~~~~qi~Advl-g~pv~~~~ 429 (431)
+.+++.++++-.+...++.+.+.+ .+++|+++||.++|..+++.+...+ |.+|..++
T Consensus 575 IAasFh~ala~~L~~~~~ra~~~~--g~~~VvLsGGV~~N~~Lre~L~~~l~g~~v~~p~ 632 (657)
T 3ttc_A 575 RAWAFHDALAQGFAALMREQATMR--GITTLVFSGGVIHNRLLRARLAHYLADFTLLFPQ 632 (657)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTT--TCCEEEEESGGGGCHHHHHHHHHHTTTSEEECCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHc--CCCEEEEECcHHHHHHHHHHHHHHhCCCEEEecC
Confidence 999999999999988888876644 4579999999999999999999988 77777653
No 43
>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes}
Probab=89.33 E-value=1 Score=41.71 Aligned_cols=72 Identities=17% Similarity=0.192 Sum_probs=46.4
Q ss_pred CCcEEEEEeCCCCeEEEEEEeecceecCCCCceeeCHHHHHHHHHHHHHHHHHhhhhcCCCCCCeeEEEEecccceEEEe
Q psy1586 1 MSKSTIVFAASTSELLTYHKVELETLTPKEGWVEQDPMVILHLVEECIEKCVGYLVDLDINPNDIVAIGITNQRETTIVW 80 (431)
Q Consensus 1 ~s~K~~l~d~~~g~~l~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~I~~I~is~~~~~~v~~ 80 (431)
.++|++++| .+|+++.+.+.+++ . .+++++++.+.+.+ +. ..+|.+|+|+..+ ++
T Consensus 14 t~i~~~l~d-~~G~il~~~~~~~~----~-----~~~~~~~~~i~~~~----~~-------~~~i~gigi~~pG----~v 68 (297)
T 4htl_A 14 TALKMGVVL-PHGEIILTKSAEIS----G-----SDGDQILAEMKVFL----AE-------NTDVTGIAVSAPG----YV 68 (297)
T ss_dssp SEEEEEEEC-TTSCEEEEEEEECS----T-----TCHHHHHHHHHHHH----HT-------CTTCCEEEEEESS----EE
T ss_pred CeEEEEEEC-CCCCEEEEEEecCC----C-----CCHHHHHHHHHHHH----hh-------cCCeeEEEEecCc----ce
Confidence 368999999 49999988777643 1 24556666555433 21 2578999999765 45
Q ss_pred eCCCCccccc-cc-eecCc
Q psy1586 81 DSTTGKPLYN-AI-VWSDV 97 (431)
Q Consensus 81 d~~~g~pl~~-~i-~w~D~ 97 (431)
|.++|..+.. .+ -|.+-
T Consensus 69 d~~~g~v~~~~~l~~w~~~ 87 (297)
T 4htl_A 69 NPKTGLITMGGAIRRFDNF 87 (297)
T ss_dssp CTTTCEEEECTTCGGGTTE
T ss_pred eCCCCEEEeCCCCCCccCC
Confidence 7646776643 33 37664
No 44
>1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, struc genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum} SCOP: c.55.1.5 c.55.1.5
Probab=89.10 E-value=1.3 Score=41.11 Aligned_cols=62 Identities=15% Similarity=0.077 Sum_probs=44.1
Q ss_pred CCcEEEEEeCCCCeEEEEEEeecceecCCCCceeeCHHHHHHHHHHHHHHHHHhhhhcCCCCCCe--eEEEEecc
Q psy1586 1 MSKSTIVFAASTSELLTYHKVELETLTPKEGWVEQDPMVILHLVEECIEKCVGYLVDLDINPNDI--VAIGITNQ 73 (431)
Q Consensus 1 ~s~K~~l~d~~~g~~l~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~I--~~I~is~~ 73 (431)
.++|++++| .+|+++.+.+.+.. . ..++++++++.+.+++++++++. +.++.+| .+|+|+.-
T Consensus 21 T~i~~~l~d-~~G~il~~~~~~~~------~-~~~~~~~~~~~l~~~i~~~l~~~---~~~~~~i~~~~igig~p 84 (305)
T 1zc6_A 21 TGTRIRLHA-SDGTPLAMAEGGAS------A-LSQGIAKSWQAVLSTLEAAFQQA---GLPAAPASACAIGLGLS 84 (305)
T ss_dssp SCEEEEEEE-TTCCEEEEEEESCC------C-GGGCHHHHHHHHHHHHHHHHHHT---TCCCCCGGGEEEEEEES
T ss_pred cceEEEEEc-CCCCEEEEEeCCCC------C-cccCHHHHHHHHHHHHHHHHHhc---CCChhhhccceEEEEec
Confidence 368999999 58999987754321 1 13689999999999999987652 4455666 56666643
No 45
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=88.83 E-value=0.32 Score=50.07 Aligned_cols=59 Identities=12% Similarity=0.113 Sum_probs=45.6
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHhcCCCCceEEEEcCCccChHHHHHHhhhcCCceEe
Q psy1586 368 KVDIVKAALEAVCFQTRDILEAMKEDCGVALEKLLVDGGMTANKYLMQLQADLTGTPVSS 427 (431)
Q Consensus 368 ~~~~~rA~~Egia~~~r~~~~~l~~~~g~~~~~i~~~GG~~~s~~~~qi~Advlg~pv~~ 427 (431)
.+++.+.+++.+.-.++..++... .....++.|+++||.++.|.+.+++++.||+++..
T Consensus 305 ~e~l~~~~~~~i~~~v~~~L~~a~-~~~~~i~~VvLvGG~sriP~v~~~l~~~fg~~~~~ 363 (605)
T 4b9q_A 305 LESLVEDLVNRSIEPLKVALQDAG-LSVSDIDDVILVGGQTRMPMVQKKVAEFFGKEPRK 363 (605)
T ss_dssp HHHHHHHHHHHTTHHHHHHHHHTT-CCGGGCSEEEEESGGGGSHHHHHHHHHHHTSCCCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcC-CCHHHCcEEEEeCCccCchHHHHHHHHHhccCcCC
Confidence 456777888888777776666532 11225789999999999999999999999998765
No 46
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=88.60 E-value=0.51 Score=45.42 Aligned_cols=60 Identities=13% Similarity=0.114 Sum_probs=44.0
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHhcCCCCceEEEEcCCccChHHHHHHhhhc-CCceEec
Q psy1586 368 KVDIVKAALEAVCFQTRDILEAMKEDCGVALEKLLVDGGMTANKYLMQLQADLT-GTPVSSS 428 (431)
Q Consensus 368 ~~~~~rA~~Egia~~~r~~~~~l~~~~g~~~~~i~~~GG~~~s~~~~qi~Advl-g~pv~~~ 428 (431)
.+++.+.+++.+.-.++..++...- ....++.|+++||+++.|.+.+.+.+.| +++|...
T Consensus 315 ~~~~~~~~~~~i~~~i~~~l~~~~~-~~~~i~~VvLvGG~s~~p~l~~~l~~~~~~~~v~~~ 375 (394)
T 3qfu_A 315 FEELNLDLFKKTLKPVEKVLQDSGL-EKKDVDDIVLVGGSTRIPKVQQLLESYFDGKKASKG 375 (394)
T ss_dssp HHHHHHHHHHHTHHHHHHHHHHHTC-CGGGCCEEEEESGGGGSHHHHHHHHHHTTTCCCBCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCC-CHHHCCEEEEECCccccHHHHHHHHHHcCCCCCCCC
Confidence 3455666777776666665555421 1224789999999999999999999999 8888654
No 47
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=87.62 E-value=0.47 Score=46.12 Aligned_cols=54 Identities=9% Similarity=0.205 Sum_probs=38.4
Q ss_pred HHHHHHHhhhhHHHHHHHHHHHHhcCC---CCceEEEEcCCccChHHHHHHhhhcCCceEe
Q psy1586 370 DIVKAALEAVCFQTRDILEAMKEDCGV---ALEKLLVDGGMTANKYLMQLQADLTGTPVSS 427 (431)
Q Consensus 370 ~~~rA~~Egia~~~r~~~~~l~~~~g~---~~~~i~~~GG~~~s~~~~qi~Advlg~pv~~ 427 (431)
++.+.+++.+.-.++..++. .+. .++.|+++||.++.|.+.+++.+.|+.++.+
T Consensus 318 ~~~~~~~~~i~~~i~~~l~~----~~~~~~~i~~V~LvGG~s~~p~v~~~l~~~f~~~~~v 374 (409)
T 4gni_A 318 TIARTVFEGFNRLVESAVKK----AGLDPLDVDEVIMSGGTSNTPRIAANFRYIFPESTRI 374 (409)
T ss_dssp HHTHHHHHHHHHHHHHHHHH----TTCCGGGCCEEEEESGGGGCHHHHHHHHHHSCTTSEE
T ss_pred HHHHHHHHHHHHHHHHHHHH----cCCCHHHCCEEEEECCccccHHHHHHHHHHcCCcccc
Confidence 34445555555444444433 343 4689999999999999999999999988544
No 48
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=87.60 E-value=0.54 Score=45.52 Aligned_cols=59 Identities=15% Similarity=0.173 Sum_probs=42.0
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHHHhcCCCCceEEEEcCCccChHHHHHHhhhc-CCceEec
Q psy1586 369 VDIVKAALEAVCFQTRDILEAMKEDCGVALEKLLVDGGMTANKYLMQLQADLT-GTPVSSS 428 (431)
Q Consensus 369 ~~~~rA~~Egia~~~r~~~~~l~~~~g~~~~~i~~~GG~~~s~~~~qi~Advl-g~pv~~~ 428 (431)
+++++.+++.+.-.++..++... .....++.|+++||+++.|.+.+.+.+.| +++|...
T Consensus 324 ~~~~~~~~~~i~~~i~~~l~~~~-~~~~~i~~VvLvGG~s~~p~l~~~l~~~~~~~~v~~~ 383 (404)
T 3i33_A 324 EELNADLFRGTLEPVEKALRDAK-LDKGQIQEIVLVGGSTRIPKIQKLLQDFFNGKELNKS 383 (404)
T ss_dssp HHHTHHHHHHTHHHHHHHHHHHT-CCGGGCCEEEEESGGGGCHHHHHHHHHHTTTCCCBCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHcC-CCHhhCCEEEEECCccccHHHHHHHHHHcCCCCCCCC
Confidence 44555666666655555555431 11125788999999999999999999999 7887654
No 49
>3vth_A Hydrogenase maturation factor; carbamoyltransfer, maturation of [NIFE]-hydrogenase, carbamoylphosphate, iron, HYPE; HET: APC AP2; 2.00A {Thermoanaerobacter tengcongensis} PDB: 3vti_A
Probab=85.68 E-value=2 Score=45.14 Aligned_cols=63 Identities=24% Similarity=0.341 Sum_probs=51.8
Q ss_pred CCCHHHHHHHHHhhhhHHHHHHHHHHHHhcCCCCceEEEEcCCccChHHHHHHhhhc---CCceEecC
Q psy1586 365 ETSKVDIVKAALEAVCFQTRDILEAMKEDCGVALEKLLVDGGMTANKYLMQLQADLT---GTPVSSSP 429 (431)
Q Consensus 365 ~~~~~~~~rA~~Egia~~~r~~~~~l~~~~g~~~~~i~~~GG~~~s~~~~qi~Advl---g~pv~~~~ 429 (431)
..+++++.+++.++++-.+....+.+.+.+| +++|+++||.+.|..+++.+.+.+ |.+|..++
T Consensus 663 g~~~~dIAasFq~ala~~L~~~~~~a~~~~g--~~~VvLsGGVa~N~~Lr~~L~~~l~~~g~~v~~p~ 728 (761)
T 3vth_A 663 GFEKSYISAKFHNTVVNFTYDLANLIRKETG--INKVVLSGGSFQNRYLLRRLIEKLSLSGFEVYSNS 728 (761)
T ss_dssp TCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC--CCEEEEESGGGGSHHHHHHHHHHHHHTTCEEEECS
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhC--CCEEEEECcHHHHHHHHHHHHHHHHhCCCEEEecC
Confidence 3578899999999999888888877766554 468999999999999999998886 77777654
No 50
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=85.32 E-value=0.74 Score=44.15 Aligned_cols=32 Identities=16% Similarity=0.300 Sum_probs=28.9
Q ss_pred CCceEEEEcCCccChHHHHHHhhhcCCceEec
Q psy1586 397 ALEKLLVDGGMTANKYLMQLQADLTGTPVSSS 428 (431)
Q Consensus 397 ~~~~i~~~GG~~~s~~~~qi~Advlg~pv~~~ 428 (431)
.++.|+++||+++.|.+.+.+.+.|+.|+...
T Consensus 333 ~i~~IvL~GG~s~~p~l~~~l~~~~~~~v~~~ 364 (383)
T 1dkg_D 333 DIDDVILVGGQTRMPMVQKKVAEFFGKEPRKD 364 (383)
T ss_dssp TCCEEEEESGGGGSHHHHHHHHHHHSSCCBCS
T ss_pred hCCEEEEecCccccHHHHHHHHHHhCCCCCCC
Confidence 46899999999999999999999999887654
No 51
>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A*
Probab=85.16 E-value=1.3 Score=40.72 Aligned_cols=46 Identities=2% Similarity=0.082 Sum_probs=35.9
Q ss_pred CCcEEEEEeCCCCeEEEEEEeecceecCCCCceeeCHHHHHHHHHHHHHHHHH
Q psy1586 1 MSKSTIVFAASTSELLTYHKVELETLTPKEGWVEQDPMVILHLVEECIEKCVG 53 (431)
Q Consensus 1 ~s~K~~l~d~~~g~~l~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~l~~~~~ 53 (431)
.++|++++| .+|+++.+.+.+. +.+.+++++++++.+.+.++++.+
T Consensus 12 t~~~~~l~d-~~g~i~~~~~~~~------~~~~~~~~~~~~~~i~~~i~~~~~ 57 (299)
T 2e2o_A 12 TKTKAVAYD-CEGNFIGEGSSGP------GNYHNVGLTRAIENIKEAVKIAAK 57 (299)
T ss_dssp SCEEEEEEC-TTSCEEEEEEESC------CCHHHHCHHHHHHHHHHHHHHHHT
T ss_pred CcEEEEEEc-CCCCEEEEEeCCC------CCcccCCHHHHHHHHHHHHHHHHh
Confidence 368999999 4999998776553 333467899999999999988754
No 52
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=84.51 E-value=2.2 Score=43.09 Aligned_cols=113 Identities=19% Similarity=0.220 Sum_probs=75.4
Q ss_pred cchhhHHHHHHHHcCCCCCH---HHHHHHHHhcCCCCCeEEEeCCCCCCCCCCCCCCceeEecCC--------CCCCHHH
Q psy1586 302 AVAGQTFKWLRDNLNIIADL---NEIESLVQKSSSHTDVVFVPAFSGLYAPYWQRDARSIICGLT--------DETSKVD 370 (431)
Q Consensus 302 ~~~G~~~~w~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~~P~~~G~r~p~~~~~~~g~~~gl~--------~~~~~~~ 370 (431)
.+.|.+++-+...++. .| ..++++|.+-. . .+-+|+- .....-+|.|+. ...+++|
T Consensus 157 ~s~G~~~D~~a~~lgl--~~~gg~~ie~lA~~g~--~-~~~~p~~--------~~~~~~sfsgl~~~~~~~~~~~~~~~~ 223 (540)
T 3en9_A 157 IAVGNCLDQFARYVNL--PHPGGPYIEELARKGK--K-LVDLPYT--------VKGMDIAFSGLLTAAMRAYDAGERLED 223 (540)
T ss_dssp SCHHHHHHHHHHHTTC--CSSCHHHHHHHHHTCC--C-CCCCCCC--------EETTEECCHHHHHHHHHHHHTTCCHHH
T ss_pred hHhHHHHHHHHHHcCC--CCCCHHHHHHHHHcCC--c-cCcCCCC--------CCCcceecHHHHHHHHHHHHcCCCHHH
Confidence 4579999999998886 34 46777775421 1 1112221 111122333431 1346889
Q ss_pred HHHHHHhhhhHHHHHHHHHHHHhcCCCCceEEEEcCCccChHHHHHHhhhc---CCceEecC
Q psy1586 371 IVKAALEAVCFQTRDILEAMKEDCGVALEKLLVDGGMTANKYLMQLQADLT---GTPVSSSP 429 (431)
Q Consensus 371 ~~rA~~Egia~~~r~~~~~l~~~~g~~~~~i~~~GG~~~s~~~~qi~Advl---g~pv~~~~ 429 (431)
+.+++.+.++-.+....+...+.+| .++|+++||.+.|..+++.+...+ |.+|..++
T Consensus 224 ia~~fq~~~~~~l~~~~~~a~~~~~--~~~~~~~GGVa~N~~l~~~l~~~~~~~~~~~~~p~ 283 (540)
T 3en9_A 224 ICYSLQEYAFSMLTEITERALAHTN--KGEVMLVGGVAANNRLREMLKAMCEGQNVDFYVPP 283 (540)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHT--CSEEEEESGGGGCHHHHHHHHHHHHHTTCEEECCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhC--CCeEEEeCcHHhHHHHHHHHHHHHHhcCCEEEeCC
Confidence 9999999988888777766655454 578999999999999999988865 56666654
No 53
>3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus}
Probab=80.46 E-value=2.4 Score=39.18 Aligned_cols=75 Identities=19% Similarity=0.108 Sum_probs=47.6
Q ss_pred CcEEEEEeCCCCeEEEEEEeecceecCCCCceeeCHHHHHHHHHHHHHHHHHhhhhcCCCCCCeeEEEEecccceEEEee
Q psy1586 2 SKSTIVFAASTSELLTYHKVELETLTPKEGWVEQDPMVILHLVEECIEKCVGYLVDLDINPNDIVAIGITNQRETTIVWD 81 (431)
Q Consensus 2 s~K~~l~d~~~g~~l~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~I~~I~is~~~~~~v~~d 81 (431)
++|++++|. ++ ++...+.+++ ..+++++++.+.+.++++.++. ..+|.+|+|+..+ ++|
T Consensus 12 ~i~~~l~d~-~~-~l~~~~~~~~---------~~~~~~~~~~i~~~i~~~~~~~------~~~i~gigi~~pG----~vd 70 (302)
T 3vov_A 12 KIAAGVFDG-KR-LLSKVVVPTP---------KEGGERVAEALAEAAERAEREA------GVRGEAIGLGTPG----PLD 70 (302)
T ss_dssp EEEEEEECS-SS-BSCCEEEECC---------SSCHHHHHHHHHHHHHHHHHHH------TCCCSSEEEEESS----CEE
T ss_pred EEEEEEEeC-CC-cEEEEEEcCC---------CCChHHHHHHHHHHHHHHHhhc------cCCceEEEEEecc----cEe
Confidence 579999995 64 4454444432 1244789999999888887642 3578888888654 357
Q ss_pred CCCCcccc-ccc-eecCc
Q psy1586 82 STTGKPLY-NAI-VWSDV 97 (431)
Q Consensus 82 ~~~g~pl~-~~i-~w~D~ 97 (431)
.++|.... +.+ -|.+-
T Consensus 71 ~~~g~v~~~~~~~~w~~~ 88 (302)
T 3vov_A 71 FRRGVIRFAPNIPGVQDF 88 (302)
T ss_dssp TTTTEEC---CCTTCTTC
T ss_pred CCCCEEEcCCCCCCcCCC
Confidence 64566553 333 47664
No 54
>2iir_A Acetate kinase; transferase; 3.30A {Thermotoga maritima}
Probab=80.30 E-value=8.4 Score=37.01 Aligned_cols=47 Identities=11% Similarity=0.166 Sum_probs=37.6
Q ss_pred HHHHhhhhHHHHHHHHHHHHhcCCCCceEEEEcCCc-cChHHHHHHhhh
Q psy1586 373 KAALEAVCFQTRDILEAMKEDCGVALEKLLVDGGMT-ANKYLMQLQADL 420 (431)
Q Consensus 373 rA~~Egia~~~r~~~~~l~~~~g~~~~~i~~~GG~~-~s~~~~qi~Adv 420 (431)
+-++|-.+|.++..+-.+.-.+| .++.|+++||.. +++.+++.+.+-
T Consensus 299 ~lA~d~f~yri~k~IGa~~a~Lg-gvDaIVFTgGIGEns~~vR~~i~~~ 346 (403)
T 2iir_A 299 KLVLEIYDYRIAKYIGAYAAAMN-GVDAIVFTAGVGENSPITREDVCSY 346 (403)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHT-CCSEEEEEHHHHTTCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHhC-CCCEEEECcccccCCHHHHHHHHhh
Confidence 44788889999888888766667 789999999999 678887776643
No 55
>2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10
Probab=80.02 E-value=6 Score=36.77 Aligned_cols=67 Identities=18% Similarity=0.100 Sum_probs=45.2
Q ss_pred CcEEEEEeCCCCeEEEEEEeecceecCCCCceeeCHHHHHHHHHHHHHHHHHhhhhcCCCCCCeeEEEEecccceEEEee
Q psy1586 2 SKSTIVFAASTSELLTYHKVELETLTPKEGWVEQDPMVILHLVEECIEKCVGYLVDLDINPNDIVAIGITNQRETTIVWD 81 (431)
Q Consensus 2 s~K~~l~d~~~g~~l~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~I~~I~is~~~~~~v~~d 81 (431)
.+|++++|. +|+++.+.+.+.+. .+++++++.+.+.++++.... ..+.+|+|+.-+ ++|
T Consensus 35 ~i~~~l~d~-~g~il~~~~~~~~~---------~~~~~~~~~i~~~i~~~~~~~-------~~i~~igi~~pG----~vd 93 (327)
T 2ap1_A 35 KIALGVFDS-TRRLQWEKRVPTPH---------TSYSAFLDAVCELVEEADQRF-------GVKGSVGIGIPG----MPE 93 (327)
T ss_dssp EEEEEEEET-TCCEEEEEEEECCC---------SCHHHHHHHHHHHHHHHHHHH-------TSCCEEEEEESS----BSC
T ss_pred EEEEEEEeC-CCCEEEEEEecCCC---------CCHHHHHHHHHHHHHHHHHhc-------CCccEEEEEeee----eEE
Confidence 579999994 99999877665421 157788888888888776542 247777776554 246
Q ss_pred CCCCcccc
Q psy1586 82 STTGKPLY 89 (431)
Q Consensus 82 ~~~g~pl~ 89 (431)
.++|..+.
T Consensus 94 ~~~g~v~~ 101 (327)
T 2ap1_A 94 TEDGTLYA 101 (327)
T ss_dssp CTTSCCBC
T ss_pred CCCCEEEc
Confidence 53465543
No 56
>3epq_A Putative fructokinase; SCRK, ADP binding, PSI2, MCSG, structural GENO protein structure initiative, midwest center for structural genomics; HET: MLY MSE MLZ ADP; 1.66A {Bacillus subtilis} PDB: 1xc3_A 3ohr_A* 3lm9_A*
Probab=79.77 E-value=4.8 Score=37.20 Aligned_cols=69 Identities=14% Similarity=0.084 Sum_probs=42.4
Q ss_pred CCcEEEEEeCCCCeEEEEEEeecceecCCCCceeeCHHHHHHHHHHHHHHHHHhhhhcCCCCCCeeEEEEecccceEEEe
Q psy1586 1 MSKSTIVFAASTSELLTYHKVELETLTPKEGWVEQDPMVILHLVEECIEKCVGYLVDLDINPNDIVAIGITNQRETTIVW 80 (431)
Q Consensus 1 ~s~K~~l~d~~~g~~l~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~I~~I~is~~~~~~v~~ 80 (431)
.++|++++| .+|+++.+.+.+.+ +++++++.+.+.++ ..+|.+|||+..+ ++
T Consensus 13 t~i~~~l~d-~~G~il~~~~~~t~-----------~~~~~l~~i~~~~~------------~~~i~gigi~~pG----~v 64 (302)
T 3epq_A 13 TXFVCAVGR-EDGTIIDRIEFPTX-----------MPDETIEXVIQYFS------------QFSLQAIGIGSFG----PV 64 (302)
T ss_dssp SEEEEEEEC-TTSCEEEEEEEECC-----------CHHHHHHHHHHHHT------------TSCCSEEEEEECS----SE
T ss_pred ceeEEEEEE-CCCcEEEEEEecCC-----------ChHHHHHHHHHHhc------------cCCceEEEEEece----ee
Confidence 368999999 59999987766531 45666555544322 1468999999654 24
Q ss_pred eCCC-----Cccc-cccceecCc
Q psy1586 81 DSTT-----GKPL-YNAIVWSDV 97 (431)
Q Consensus 81 d~~~-----g~pl-~~~i~w~D~ 97 (431)
|.++ |... .|..-|.+-
T Consensus 65 d~~~~~~~~G~i~~~~~~~w~~~ 87 (302)
T 3epq_A 65 DNDXTSQTYGTITATPXAGWRHY 87 (302)
T ss_dssp ECCTTSTTTTEECCCSSTTTBTC
T ss_pred ccccccccccEEecCCCCCccCC
Confidence 5523 4433 233457654
No 57
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=79.74 E-value=1.6 Score=43.85 Aligned_cols=59 Identities=14% Similarity=0.117 Sum_probs=40.7
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHHHhcCCCCceEEEEcCCccChHHHHHHhhhcCCceEec
Q psy1586 369 VDIVKAALEAVCFQTRDILEAMKEDCGVALEKLLVDGGMTANKYLMQLQADLTGTPVSSS 428 (431)
Q Consensus 369 ~~~~rA~~Egia~~~r~~~~~l~~~~g~~~~~i~~~GG~~~s~~~~qi~Advlg~pv~~~ 428 (431)
+++++.+++.+.-.++..++... .....++.|+++||+++.|.+.+.+.+.|++++...
T Consensus 275 e~l~~~~~~~i~~~i~~~L~~a~-~~~~~i~~VvLvGG~s~~p~v~~~l~~~f~~~~~~~ 333 (509)
T 2v7y_A 275 EELSAHLVERTMGPVRQALQDAG-LTPADIDKVILVGGSTRIPAVQEAIKRELGKEPHKG 333 (509)
T ss_dssp HHHTHHHHHTTHHHHHHHHHHHT-CCGGGCSEEEEESGGGGCHHHHHHHHHHHSSCCBCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHcC-CChhHCcEEEEECCcccChHHHHHHHHHhCCCcCcC
Confidence 34455566665555555444431 111247899999999999999999999999876543
No 58
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=78.93 E-value=1.8 Score=45.02 Aligned_cols=59 Identities=25% Similarity=0.269 Sum_probs=42.2
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHHHhcCCCCceEEEEcCCccChHHHHHHhhhcCCceEec
Q psy1586 369 VDIVKAALEAVCFQTRDILEAMKEDCGVALEKLLVDGGMTANKYLMQLQADLTGTPVSSS 428 (431)
Q Consensus 369 ~~~~rA~~Egia~~~r~~~~~l~~~~g~~~~~i~~~GG~~~s~~~~qi~Advlg~pv~~~ 428 (431)
+++.+.+++.+.-.++..++... .....++.|+++||+++.|.+.+++.+.||+++...
T Consensus 307 e~l~~~l~~~i~~~i~~~L~~a~-l~~~~I~~VvLvGGssriP~v~~~l~~~fg~~~~~~ 365 (675)
T 3d2f_A 307 EELVKPLLERVTEPVTKALAQAK-LSAEEVDFVEIIGGTTRIPTLKQSISEAFGKPLSTT 365 (675)
T ss_dssp HHHTHHHHTTTTHHHHHHHHHHT-CCGGGCCEEEEESGGGGSHHHHHHHHHHHTSCEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhC-CChhhCcEEEEECCCccChHHHHHHHHhcCCCcccc
Confidence 44555666666666655554431 111247899999999999999999999999988643
No 59
>2e1z_A Propionate kinase; TDCD, native, acetate kinase, nucleotide, AP4A, ADP, ATP, AMPPNP, transferase; HET: B4P; 1.98A {Salmonella typhimurium} SCOP: c.55.1.2 c.55.1.2 PDB: 1x3n_A* 2e1y_A 1x3m_A* 2e20_A*
Probab=78.71 E-value=7.7 Score=37.40 Aligned_cols=47 Identities=13% Similarity=0.257 Sum_probs=37.9
Q ss_pred HHHHhhhhHHHHHHHHHHHHhcCCCCceEEEEcCCc-cChHHHHHHhhh
Q psy1586 373 KAALEAVCFQTRDILEAMKEDCGVALEKLLVDGGMT-ANKYLMQLQADL 420 (431)
Q Consensus 373 rA~~Egia~~~r~~~~~l~~~~g~~~~~i~~~GG~~-~s~~~~qi~Adv 420 (431)
+-++|-.+|.++..+-.+.-.+| .++.|+++||.. +++.+++.+.+-
T Consensus 307 ~lA~d~f~yri~k~IGa~aa~Lg-gvDaIVFTgGIGEns~~vR~~i~~~ 354 (415)
T 2e1z_A 307 RLAIKTFVHRIARHIAGHAASLH-RLDGIIFTGGIGENSVLIRQLVIEH 354 (415)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCS-SCCEEEEEHHHHHHCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHhC-CCCEEEECccccccCHHHHHHHHhh
Confidence 44788889999998888876565 689999999999 688887777654
No 60
>1g99_A Acetate kinase; alpha/beta, askha (acetate and sugar kinases, HSC70, actin) superfamily, conserved epsilon conformation; HET: ADP; 2.50A {Methanosarcina thermophila} SCOP: c.55.1.2 c.55.1.2 PDB: 1tuu_A* 1tuy_A*
Probab=78.50 E-value=8.3 Score=37.11 Aligned_cols=48 Identities=8% Similarity=0.166 Sum_probs=38.5
Q ss_pred HHHHHhhhhHHHHHHHHHHHHhcCCCCceEEEEcCCc-cChHHHHHHhhh
Q psy1586 372 VKAALEAVCFQTRDILEAMKEDCGVALEKLLVDGGMT-ANKYLMQLQADL 420 (431)
Q Consensus 372 ~rA~~Egia~~~r~~~~~l~~~~g~~~~~i~~~GG~~-~s~~~~qi~Adv 420 (431)
++-++|-.+|.++..+-.+.-.+| .++.|+++||.. +++.+++.+.+-
T Consensus 298 A~lA~d~f~yri~k~IGa~~a~Lg-gvDaiVFTgGIGEns~~vR~~i~~~ 346 (408)
T 1g99_A 298 AELALEIFAYKVKKFIGEYSAVLN-GADAVVFTAGIGENSASIRKRILTG 346 (408)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTT-SCSEEEEEHHHHHHCHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhC-CCCEEEECccccccCHHHHHHHHhh
Confidence 344788889999988888876665 689999999999 688888777654
No 61
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A
Probab=77.52 E-value=0.85 Score=43.02 Aligned_cols=30 Identities=27% Similarity=0.279 Sum_probs=27.9
Q ss_pred ceEEEEcCCccChHHHHHHhhhcCCceEec
Q psy1586 399 EKLLVDGGMTANKYLMQLQADLTGTPVSSS 428 (431)
Q Consensus 399 ~~i~~~GG~~~s~~~~qi~Advlg~pv~~~ 428 (431)
+.|+++||+++.+.+.+.+.+.|+.||.+.
T Consensus 279 ~~IvL~GG~s~~p~l~~~l~~~~~~~v~~~ 308 (344)
T 1jce_A 279 RGIFLTGGGSLLRGLDTLLQKETGISVIRS 308 (344)
T ss_dssp HCEEEESGGGCSBTHHHHHHHHHSSCEEEC
T ss_pred CcEEEECccccchHHHHHHHHHHCCCcccc
Confidence 579999999999999999999999998765
No 62
>4g9i_A Hydrogenase maturation protein HYPF; zinc finger, ATP binding, carbamoyla transferase; 4.50A {Thermococcus kodakarensis}
Probab=75.65 E-value=4.7 Score=42.49 Aligned_cols=62 Identities=15% Similarity=0.211 Sum_probs=49.1
Q ss_pred CCCHHHHHHHHHhhhhHHHHHHHHHHHHhcCCCCceEEEEcCCccChHHHHHHhhhc---CCceEec
Q psy1586 365 ETSKVDIVKAALEAVCFQTRDILEAMKEDCGVALEKLLVDGGMTANKYLMQLQADLT---GTPVSSS 428 (431)
Q Consensus 365 ~~~~~~~~rA~~Egia~~~r~~~~~l~~~~g~~~~~i~~~GG~~~s~~~~qi~Advl---g~pv~~~ 428 (431)
..++.++++++.+.++-.+...+..+.+.+ ..++|+++||.+.|..+++.+.+.+ |..|..+
T Consensus 675 ~~~~~dIAasfQ~al~~~L~~~~~~a~~~t--g~~~VvLSGGVa~N~~L~~~l~~~L~~~G~~v~~p 739 (772)
T 4g9i_A 675 GASPADIAYSAHLALARAFAHTAVERAREF--GVKNVALSGGVAYNELITKMIRKVVEANGLNFHVT 739 (772)
T ss_dssp TSCHHHHHHHHHHHHHHHHHHHHHHHHHTT--TCSCCCEESSTTCCHHHHHHHHHHGGGSSCCCCCC
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHh--CcCEEEEEchHHHHHHHHHHHHHHHHHCCCEEEcc
Confidence 356789999999998888888877776654 4578999999999999999988765 4555543
No 63
>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10
Probab=74.27 E-value=7.3 Score=35.47 Aligned_cols=60 Identities=10% Similarity=0.142 Sum_probs=39.7
Q ss_pred CcEEEEEeCCCCeEEEEEEeecceecCCCCceeeCHHHHHHHHHHHHHHHHHhhhhcCCCCCCeeEEEEecccceEEEee
Q psy1586 2 SKSTIVFAASTSELLTYHKVELETLTPKEGWVEQDPMVILHLVEECIEKCVGYLVDLDINPNDIVAIGITNQRETTIVWD 81 (431)
Q Consensus 2 s~K~~l~d~~~g~~l~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~I~~I~is~~~~~~v~~d 81 (431)
++|++++| .+|+++.+.+.+.+ .+++++.+.+.+.+++ .++.+|+|+..+ ++|
T Consensus 15 ~i~~~l~d-~~g~il~~~~~~~~----------~~~~~~~~~i~~~i~~------------~~i~gigi~~pG----~vd 67 (292)
T 2gup_A 15 GIKFASLT-PDGKILDKTSISTP----------ENLEDLLAWLDQRLSE------------QDYSGIAMSVPG----AVN 67 (292)
T ss_dssp EEEEEEEC-TTCCEEEEEEECCC----------SSHHHHHHHHHHHHTT------------SCCSEEEEEESS----EEC
T ss_pred EEEEEEEC-CCCCEEEEEEEeCC----------CCHHHHHHHHHHHHHh------------CCCcEEEEEecC----ccc
Confidence 57999999 49999987665432 3577776666554432 357888888654 356
Q ss_pred CCCCccc
Q psy1586 82 STTGKPL 88 (431)
Q Consensus 82 ~~~g~pl 88 (431)
.++|..+
T Consensus 68 ~~~g~v~ 74 (292)
T 2gup_A 68 QETGVID 74 (292)
T ss_dssp TTTCBEE
T ss_pred CCCCEEE
Confidence 5456654
No 64
>3khy_A Propionate kinase; csgid, IDP01739, ATP-binding, nucleotide-binding, transferase, structural genomics; 1.98A {Francisella tularensis subsp}
Probab=72.23 E-value=14 Score=35.07 Aligned_cols=47 Identities=15% Similarity=0.212 Sum_probs=36.8
Q ss_pred HHHHHhhhhHHHHHHHHHHHHhcCCCCceEEEEcCCcc-ChHHHHHHhh
Q psy1586 372 VKAALEAVCFQTRDILEAMKEDCGVALEKLLVDGGMTA-NKYLMQLQAD 419 (431)
Q Consensus 372 ~rA~~Egia~~~r~~~~~l~~~~g~~~~~i~~~GG~~~-s~~~~qi~Ad 419 (431)
++-++|..+|.++..+-.+.-.+| .++.|+++||... ++.+++.+.+
T Consensus 289 A~lA~d~f~yri~k~IGa~aa~L~-gvDaIVFTgGIgEns~~iR~~i~~ 336 (384)
T 3khy_A 289 AKLAIEIFSHRVAKFVASYMIYFN-KLDALVFTGGIGENAANIRKNIIS 336 (384)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGCS-SCCEEEEEHHHHHHCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhC-CCCEEEECCccccCcHHHHHHHHh
Confidence 456788889999998888866566 7899999999995 5667766544
No 65
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Probab=72.12 E-value=3.4 Score=41.88 Aligned_cols=57 Identities=12% Similarity=0.139 Sum_probs=38.4
Q ss_pred HHHHHHHhhhhHHHHHHHHHHHHhcCCCCceEEEEcCCccChHHHHHHhhhcC-CceEe
Q psy1586 370 DIVKAALEAVCFQTRDILEAMKEDCGVALEKLLVDGGMTANKYLMQLQADLTG-TPVSS 427 (431)
Q Consensus 370 ~~~rA~~Egia~~~r~~~~~l~~~~g~~~~~i~~~GG~~~s~~~~qi~Advlg-~pv~~ 427 (431)
++...+++.+.-.++..++... .....++.|+++||+++.|.+.+.+.+.|+ +++..
T Consensus 304 ~l~~~~~~~i~~~i~~~L~~a~-~~~~~i~~VvLvGG~srip~v~~~l~~~f~~~~v~~ 361 (554)
T 1yuw_A 304 ELNADLFRGTLDPVEKALRDAK-LDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNK 361 (554)
T ss_dssp HHTHHHHHHTTHHHHHHHHHTT-CCGGGCCEEEEESGGGGCHHHHHHHHHHTTTCCCBC
T ss_pred HHHHHHHHHHHHHHHHHHHHcC-CChhhCcEEEEECCcccChHHHHHHHHHcCCCcccc
Confidence 4455555555544444444321 111257899999999999999999999996 77654
No 66
>3ven_A O-carbamoyltransferase TOBZ; antibiotic biosynthesis, substrate assisted catalysis, subst channeling, adenylation; HET: TLA; 1.57A {Streptoalloteichus tenebrarius} PDB: 3veo_A 3ves_A* 3vet_A* 3vew_A* 3ver_A* 3vf4_A* 3vf2_A* 3vex_A* 3vez_A*
Probab=71.95 E-value=7.4 Score=39.36 Aligned_cols=59 Identities=15% Similarity=0.121 Sum_probs=47.3
Q ss_pred CHHHHHHHHHhhhhHHHHHHHHHHHHhcCCCCceEEEEcCCccChHHHHHHhhhcCC-ceEe
Q psy1586 367 SKVDIVKAALEAVCFQTRDILEAMKEDCGVALEKLLVDGGMTANKYLMQLQADLTGT-PVSS 427 (431)
Q Consensus 367 ~~~~~~rA~~Egia~~~r~~~~~l~~~~g~~~~~i~~~GG~~~s~~~~qi~Advlg~-pv~~ 427 (431)
...|+.+++.+.++-.+...+..+.+.+| +++|+++||.+.|..+++.+....+. .|.+
T Consensus 279 ~~~dIAasfQ~~l~~~L~~~~~~a~~~tg--~~~l~LaGGVa~N~~L~~~l~~~~~~~~v~v 338 (576)
T 3ven_A 279 EYRDLAATAQAALERAVFGLADSVLARTG--ERTLFVAGGVGLNATMNGKLLTRSTVDKMFV 338 (576)
T ss_dssp GGHHHHHHHHHHHHHHHHHHHHHHHHHHT--CSEEEEESGGGGCHHHHHHHHTSTTCSEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcC--CCeEEecchHHHHHHHHHHHHHhcCCCeEEe
Confidence 47899999999998888888777666554 57999999999999999988876654 4443
No 67
>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10
Probab=71.78 E-value=9.3 Score=34.65 Aligned_cols=73 Identities=7% Similarity=0.087 Sum_probs=44.8
Q ss_pred CcEEEEEeCCCCeEEEEEEeecceecCCCCceeeCHHHHHHHHHHHHHHHHHhhhhcCCCCCCeeEEEEecccceEEEee
Q psy1586 2 SKSTIVFAASTSELLTYHKVELETLTPKEGWVEQDPMVILHLVEECIEKCVGYLVDLDINPNDIVAIGITNQRETTIVWD 81 (431)
Q Consensus 2 s~K~~l~d~~~g~~l~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~I~~I~is~~~~~~v~~d 81 (431)
++|++++|. +|+++.+.+.+.+. ..+++++++.+.+.++++.+ ++.+|+|+..+ ++|
T Consensus 12 ~~~~~l~d~-~g~il~~~~~~~~~--------~~~~~~~~~~i~~~i~~~~~----------~~~~igi~~pG----~vd 68 (289)
T 2aa4_A 12 KLAAALIGA-DGQIRDRRELPTPA--------SQTPEALRDALSALVSPLQA----------HAQRVAIASTG----IIR 68 (289)
T ss_dssp EEEEEEECT-TCCEEEEEEEECCS--------SCCHHHHHHHHHHHHTTTGG----------GCSEEEEEESS----EEE
T ss_pred EEEEEEECC-CCCEEEEEEecCCC--------CCCHHHHHHHHHHHHHHHHh----------hCCEEEEEecc----cee
Confidence 579999994 99999887766532 13588888888777665432 23456665433 346
Q ss_pred CCCCcccc-ccc-eecCc
Q psy1586 82 STTGKPLY-NAI-VWSDV 97 (431)
Q Consensus 82 ~~~g~pl~-~~i-~w~D~ 97 (431)
.++|..+. |.+ -|.+.
T Consensus 69 ~~~g~v~~~~~~~~w~~~ 86 (289)
T 2aa4_A 69 DGSLLALNPHNLGGLLHF 86 (289)
T ss_dssp TTEEECSSGGGGGGGTTC
T ss_pred CCCCEEEeCCCCCcccCC
Confidence 53455442 333 37654
No 68
>4ijn_A Acetate kinase, acetokinase; proprionate kinase, ATP-dependent, metabolic intermediate biosynthesis, acetyl-COA biosynthesis, hydrolysis; HET: AMP; 1.70A {Mycobacterium smegmatis}
Probab=70.58 E-value=16 Score=35.02 Aligned_cols=48 Identities=13% Similarity=0.072 Sum_probs=36.5
Q ss_pred HHHHHHhhhhHHHHHHHHHHHHhcCCCCceEEEEcCCcc-ChHHHHHHhh
Q psy1586 371 IVKAALEAVCFQTRDILEAMKEDCGVALEKLLVDGGMTA-NKYLMQLQAD 419 (431)
Q Consensus 371 ~~rA~~Egia~~~r~~~~~l~~~~g~~~~~i~~~GG~~~-s~~~~qi~Ad 419 (431)
-++-++|..+|.++..+-.+.-.+| .++.|+++||.+. ++.+++.+.+
T Consensus 298 ~A~la~d~f~yriak~Iga~aa~LG-~vDaIVfTGGIgEns~~vr~~I~~ 346 (398)
T 4ijn_A 298 HAKLAYDVYIHRLRKYIGAYMAVLG-RTDVISFTAGVGENVPPVRRDALA 346 (398)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHS-SCCEEEEEHHHHHHCHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhC-CCcEEEECCccccccHHHHHHHHH
Confidence 3567888889999888877765565 7899999999996 5656665543
No 69
>3sk3_A Acetate kinase, acetokinase; actin-like ATPase domain, askha superfamily of phosphotransf acetokinase, ATP binding, phosphotransferase; HET: CIT; 1.90A {Salmonella enterica subsp} PDB: 3slc_A
Probab=67.02 E-value=51 Score=31.74 Aligned_cols=96 Identities=15% Similarity=0.297 Sum_probs=57.0
Q ss_pred HHHHHHHHcCCCCCHHHHHHHHHhcCCCCCeEEEeCCCCCCCCCCCCCCceeEecCCCCCCHHHHHHHHHhhhhHHHHHH
Q psy1586 307 TFKWLRDNLNIIADLNEIESLVQKSSSHTDVVFVPAFSGLYAPYWQRDARSIICGLTDETSKVDIVKAALEAVCFQTRDI 386 (431)
Q Consensus 307 ~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~P~~~G~r~p~~~~~~~g~~~gl~~~~~~~~~~rA~~Egia~~~r~~ 386 (431)
.+-++.+..+. +.+++++++.+- +|++= +.|.. .+.|-. .....+ .+-++-++|-.+|.++..
T Consensus 266 ~l~~l~~~~g~--s~~ei~~~Lnk~---SGLlg---lsG~S-----~D~R~l---e~~~~g-d~~A~lA~d~f~yri~k~ 328 (415)
T 3sk3_A 266 IIFHLHDTLGM--SVDQINKMLTKE---SGLLG---LTEVT-----SDCRYV---EDNYAT-KEDAKRAMDVYCHRLAKY 328 (415)
T ss_dssp HHHHHHHHHTC--CHHHHHHHC---------CC---STTTT-----CGGGCS---SCCCCC-HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCC--CHHHHHHHHhcC---cCccc---ccCCc-----chHHHH---HHHHcC-CHhHHHHHHHHHHHHHHH
Confidence 45556656665 788888887653 33321 22321 122211 011112 234566889999999999
Q ss_pred HHHHHHhcCCCCceEEEEcCCcc-ChHHHHHHhh
Q psy1586 387 LEAMKEDCGVALEKLLVDGGMTA-NKYLMQLQAD 419 (431)
Q Consensus 387 ~~~l~~~~g~~~~~i~~~GG~~~-s~~~~qi~Ad 419 (431)
+-.+.-.++.+++.|+++||... ++.+++.+.+
T Consensus 329 IGa~aa~L~G~vDaIVFTgGIGEns~~vR~~v~~ 362 (415)
T 3sk3_A 329 IGSYTALMDGRLDAVVFTGGIGENAAMVRELSLG 362 (415)
T ss_dssp HHHGGGGSTTCCCEEEEEHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHhCCCCCEEEECCccccCCHHHHHHHHh
Confidence 98887666667899999999986 5666666654
No 70
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=65.45 E-value=1.6 Score=44.73 Aligned_cols=31 Identities=16% Similarity=0.305 Sum_probs=28.3
Q ss_pred CCceEEEEcCCccChHHHHHHhhhcCCceEe
Q psy1586 397 ALEKLLVDGGMTANKYLMQLQADLTGTPVSS 427 (431)
Q Consensus 397 ~~~~i~~~GG~~~s~~~~qi~Advlg~pv~~ 427 (431)
.++.|+++||.++.|.+.+++.+.||+++..
T Consensus 333 ~i~~VvLvGG~srip~v~~~l~~~fg~~~~~ 363 (605)
T 2kho_A 333 DIDDVILVGGQTRMPMVQKKVAEFFGKEPRK 363 (605)
T ss_dssp TCSEEEEESGGGGSHHHHHHHHHHHSSCCBC
T ss_pred hCceEEEECCcccChHHHHHHHHhcCCCcCc
Confidence 5789999999999999999999999988654
No 71
>3r9p_A ACKA; ssgcid, seattle structural genomics center for infectious DI acetate kinase, transferase; HET: PGE; 1.90A {Mycobacterium avium subsp} PDB: 3p4i_A 4dq8_A
Probab=65.30 E-value=21 Score=34.10 Aligned_cols=48 Identities=10% Similarity=0.117 Sum_probs=37.5
Q ss_pred HHHHHHhhhhHHHHHHHHHHHHhcCCCCceEEEEcCCcc-ChHHHHHHhh
Q psy1586 371 IVKAALEAVCFQTRDILEAMKEDCGVALEKLLVDGGMTA-NKYLMQLQAD 419 (431)
Q Consensus 371 ~~rA~~Egia~~~r~~~~~l~~~~g~~~~~i~~~GG~~~-s~~~~qi~Ad 419 (431)
-++-++|..+|.++..+-.+.-.+| .++.|+++||... ++.+++.+.+
T Consensus 289 ~A~lA~d~f~yri~k~Iga~aa~Lg-~vDaIVfTGGIgens~~vR~~i~~ 337 (391)
T 3r9p_A 289 AAQLAYSVFTHRLRKYIGAYLAVLG-HTDVISFTAGIGENDAAVRRDAVS 337 (391)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHS-SCCEEEEEHHHHHHCHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhC-CCCEEEECcccccCCHHHHHHHHH
Confidence 3566888899999988877766566 7899999999998 4667766544
No 72
>1woq_A Inorganic polyphosphate/ATP-glucomannokinase; transferase; HET: BGC; 1.80A {Arthrobacter SP} SCOP: c.55.1.10 c.55.1.10
Probab=60.41 E-value=33 Score=30.55 Aligned_cols=78 Identities=14% Similarity=0.157 Sum_probs=44.6
Q ss_pred CcEEEEEeCCCCeEEEE-EEeecceecCCCCceeeCHHHHHHHHHHHHHHHHHhhhhcCCCCCCeeEEEEecccceEEEe
Q psy1586 2 SKSTIVFAASTSELLTY-HKVELETLTPKEGWVEQDPMVILHLVEECIEKCVGYLVDLDINPNDIVAIGITNQRETTIVW 80 (431)
Q Consensus 2 s~K~~l~d~~~g~~l~~-~~~~~~~~~~~~g~~e~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~I~~I~is~~~~~~v~~ 80 (431)
++|++++|...|+++.. .+.+.+ ...+++++++.+.+.++++.++.. ....+.+|||+..+ .|
T Consensus 23 ~i~~~l~dl~~g~i~~~~~~~~~~--------~~~~~~~~~~~i~~~i~~~~~~~~----~~~~~~~igi~~pG--~v-- 86 (267)
T 1woq_A 23 GIKGGIVDLKKGKLLGERFRVPTP--------QPATPESVAEAVALVVAELSARPE----APAAGSPVGVTFPG--II-- 86 (267)
T ss_dssp EEEEEEEETTTTEEEEEEEEEECC--------SSCCHHHHHHHHHHHHHHHHTSTT----CCCTTCCEEEEESS--CE--
T ss_pred EEEEEEEECCCCeEEEEEEecCCC--------ccCCHHHHHHHHHHHHHHHHHhcc----ccCccceEEEEccc--eE--
Confidence 57999999523787743 233321 124688899999998888765321 11234456666544 23
Q ss_pred eCCCCcccc-ccc--eecCc
Q psy1586 81 DSTTGKPLY-NAI--VWSDV 97 (431)
Q Consensus 81 d~~~g~pl~-~~i--~w~D~ 97 (431)
| +|..+. |.+ -|.+-
T Consensus 87 ~--~g~v~~~~~l~~~w~~~ 104 (267)
T 1woq_A 87 Q--HGVVHSAANVDKSWLNT 104 (267)
T ss_dssp E--TTEECCCTTSCGGGTTC
T ss_pred c--CCEEEeCCCCCCCCCCC
Confidence 5 366553 333 37654
No 73
>3zyy_X Iron-sulfur cluster binding protein; iron-sulfur-binding protein, ashka family, ATPase; 2.20A {Carboxydothermus hydrogenoformans}
Probab=56.53 E-value=22 Score=36.36 Aligned_cols=71 Identities=10% Similarity=0.101 Sum_probs=49.2
Q ss_pred CcEEEEEeCCCCeEEEEEEeecceecCCCC------cee---eCHHHHHHHHHHHHHHHHHhhh-hcCCCCCCeeEEEEe
Q psy1586 2 SKSTIVFAASTSELLTYHKVELETLTPKEG------WVE---QDPMVILHLVEECIEKCVGYLV-DLDINPNDIVAIGIT 71 (431)
Q Consensus 2 s~K~~l~d~~~g~~l~~~~~~~~~~~~~~g------~~e---~d~~~~~~~~~~~l~~~~~~~~-~~~~~~~~I~~I~is 71 (431)
.+.+.|+|..+|+++++.+.-++....... ++. ...+++-+++.+.++++++++. +.++++++|..+.++
T Consensus 217 tv~~~LvdL~tG~~l~~~~~~NpQ~~~G~DVisRI~~a~~~~~g~~~L~~~v~~~in~li~~l~~~~~i~~~~I~~~~v~ 296 (631)
T 3zyy_X 217 TVVVQLVDLVSGKVLGTKGNYNKQAAFGDDVISRIIYVDENPDGAEKLRKAVLSTINELIFQLCKEHGVEKKEIMAAVVA 296 (631)
T ss_dssp EEEEEEEETTTCCEEEEEEEECGGGGTCSSHHHHHHHHHHCTTHHHHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEEEEE
T ss_pred ceeEEEEECCCCCEEEeecccCCCCCcchHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHHHHHHcCCCHHHeeEEEEE
Confidence 467889999999999999988775432211 121 2234566667777777776654 357888999888777
Q ss_pred c
Q psy1586 72 N 72 (431)
Q Consensus 72 ~ 72 (431)
|
T Consensus 297 G 297 (631)
T 3zyy_X 297 G 297 (631)
T ss_dssp E
T ss_pred c
Confidence 6
No 74
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A
Probab=51.85 E-value=15 Score=34.01 Aligned_cols=31 Identities=13% Similarity=0.097 Sum_probs=25.2
Q ss_pred CCceEEEEcCCccChHHHHHHhhhcCC---ceEecC
Q psy1586 397 ALEKLLVDGGMTANKYLMQLQADLTGT---PVSSSP 429 (431)
Q Consensus 397 ~~~~i~~~GG~~~s~~~~qi~Advlg~---pv~~~~ 429 (431)
.++.|+++||+|+- +.+.+.+.++. ++.+++
T Consensus 272 ~~~~vvl~GGga~l--l~~~l~~~~~~~~~~~~~~~ 305 (320)
T 2zgy_A 272 GYTHVMVIGGGAEL--ICDAVKKHTQIRDERFFKTN 305 (320)
T ss_dssp CCCEEEEESTTHHH--HHHHHHHTSCCCGGGEECCS
T ss_pred CCCeEEEECChHHH--HHHHHHHHhCCCCCceeeCC
Confidence 57899999999974 88889999998 566543
No 75
>1xho_A Chorismate mutase; southeast collaboratory for structural genomics, secsg, protein structure initiative, PSI, structural genomics; 2.20A {Clostridium thermocellum} SCOP: d.79.1.2
Probab=51.61 E-value=23 Score=28.56 Aligned_cols=38 Identities=13% Similarity=0.202 Sum_probs=32.0
Q ss_pred eeCHHHHHHHHHHHHHHHHHhhhhcCCCCCCeeEEEEeccc
Q psy1586 34 EQDPMVILHLVEECIEKCVGYLVDLDINPNDIVAIGITNQR 74 (431)
Q Consensus 34 e~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~I~~I~is~~~ 74 (431)
+-+++++++++.++++++++. -++++++|.+|-||.+.
T Consensus 43 ~Nt~e~I~~At~ELl~eii~~---N~l~~eDIvSv~FTvT~ 80 (148)
T 1xho_A 43 DNTADEIVAETQKLLKEMAEK---NGLEEDDIISIIFTVTK 80 (148)
T ss_dssp SSSHHHHHHHHHHHHHHHHHH---TTCCGGGEEEEEEEECT
T ss_pred CCCHHHHHHHHHHHHHHHHHH---cCCCHHHEEEEEEEeCC
Confidence 457899999999999999876 36788999999999764
No 76
>3mcp_A Glucokinase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, transferase; 3.00A {Parabacteroides distasonis}
Probab=50.76 E-value=17 Score=34.48 Aligned_cols=75 Identities=12% Similarity=-0.051 Sum_probs=45.7
Q ss_pred CcEEEEEeCCCCeEEEEE-EeecceecCCCCceeeCHHHHHHHHHHHHHHHHHhhhhcCCCCCCeeEEEEecccceEEEe
Q psy1586 2 SKSTIVFAASTSELLTYH-KVELETLTPKEGWVEQDPMVILHLVEECIEKCVGYLVDLDINPNDIVAIGITNQRETTIVW 80 (431)
Q Consensus 2 s~K~~l~d~~~g~~l~~~-~~~~~~~~~~~g~~e~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~I~~I~is~~~~~~v~~ 80 (431)
++|++++| +|+++.+. +.+.+ . . +++++++.+.+.+..+ +++ . ..+|.+|||+..+. +
T Consensus 20 ~i~~~l~d--~G~il~~~~~~~~~------~--~-~~~~~l~~i~~~~~~i-~~~----~-~~~i~gIGIavPG~----V 78 (366)
T 3mcp_A 20 NFVFSAIQ--GGKEIADPVVLPAC------A--D-CLDKCLGNLVEGFKAI-QAG----L-PEAPVAISFAFPGP----A 78 (366)
T ss_dssp EEEEEEEE--TTEECSCCEEEECC------T--T-CHHHHHHHHHHHHHHH-HTT----C-SSCCCEEEEECCSS----E
T ss_pred eEEEEEEE--CCEEEEEEEEEECC------C--C-CHHHHHHHHHHHHHHH-HHH----h-hcCCeEEEEEecce----E
Confidence 57888888 68887654 44332 1 1 7888888888733222 211 1 15789999997652 4
Q ss_pred eCCCCcccc-ccc-eec-Cc
Q psy1586 81 DSTTGKPLY-NAI-VWS-DV 97 (431)
Q Consensus 81 d~~~g~pl~-~~i-~w~-D~ 97 (431)
|.++|..+. |-+ -|. +-
T Consensus 79 d~~~G~i~~~~nlp~w~~~~ 98 (366)
T 3mcp_A 79 DYQAGIIGDLPNFPSFRGGV 98 (366)
T ss_dssp ETTTTEECCCTTCGGGTTCB
T ss_pred eCCCCEEEeCCCcccccCCC
Confidence 654576653 344 687 54
No 77
>3djc_A Type III pantothenate kinase; structural genomics, putative transfera 2, protein structure initiative; 2.40A {Legionella pneumophila subsp}
Probab=49.01 E-value=38 Score=30.47 Aligned_cols=44 Identities=14% Similarity=0.260 Sum_probs=37.0
Q ss_pred CCCHHHHHHHHHhhhhHHHHHHHHHHHHh--cCCCCceEEEEcCCcc
Q psy1586 365 ETSKVDIVKAALEAVCFQTRDILEAMKED--CGVALEKLLVDGGMTA 409 (431)
Q Consensus 365 ~~~~~~~~rA~~Egia~~~r~~~~~l~~~--~g~~~~~i~~~GG~~~ 409 (431)
..|.+.|-..++-|.+..+..++++++++ .+. .-+|+++||.++
T Consensus 184 ~nT~~ai~sGi~~g~~g~i~~~i~~~~~~~~~~~-~~~vi~TGG~a~ 229 (266)
T 3djc_A 184 RSTIESIQSGVYYGVLGACKELIQRIHHEAFNGD-QILILATGGFAS 229 (266)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTC-CEEEEEESTTGG
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC-CCEEEEECCChH
Confidence 46788899999999999999999999876 553 357999999886
No 78
>2f9w_A Pantothenate kinase; COAA, transferase; HET: PAU; 1.90A {Pseudomonas aeruginosa} SCOP: c.55.1.13 c.55.1.13 PDB: 2f9t_A*
Probab=48.89 E-value=24 Score=31.97 Aligned_cols=44 Identities=14% Similarity=0.126 Sum_probs=37.7
Q ss_pred CCCHHHHHHHHHhhhhHHHHHHHHHHHHhcCCCCceEEEEcCCcc
Q psy1586 365 ETSKVDIVKAALEAVCFQTRDILEAMKEDCGVALEKLLVDGGMTA 409 (431)
Q Consensus 365 ~~~~~~~~rA~~Egia~~~r~~~~~l~~~~g~~~~~i~~~GG~~~ 409 (431)
..|.+.|-..++.|.+..+..++++++++.+ +.-+|+++||.++
T Consensus 201 ~nT~~ai~sGi~~g~~g~Ie~~i~~~~~e~~-~~~~vi~TGG~a~ 244 (271)
T 2f9w_A 201 QATAEAVERGCLLMLRGFVREQYAMACELLG-PDCEIFLTGGDAE 244 (271)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEEESTTGG
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCCEEEEECCCHH
Confidence 4678889999999999999999999988776 3457999999886
No 79
>1dbf_A Protein (chorismate mutase); shikimate pathway, isomerase; 1.30A {Bacillus subtilis} SCOP: d.79.1.2 PDB: 1com_A 2chs_A 2cht_A* 1fnj_A 1fnk_A
Probab=48.50 E-value=29 Score=27.32 Aligned_cols=38 Identities=18% Similarity=0.281 Sum_probs=31.8
Q ss_pred eeCHHHHHHHHHHHHHHHHHhhhhcCCCCCCeeEEEEeccc
Q psy1586 34 EQDPMVILHLVEECIEKCVGYLVDLDINPNDIVAIGITNQR 74 (431)
Q Consensus 34 e~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~I~~I~is~~~ 74 (431)
+-+++++++++.+++.++++.- ++++++|.+|-||.+.
T Consensus 14 ~Nt~e~I~~at~eLl~~i~~~N---~l~~~dIvSv~FT~T~ 51 (127)
T 1dbf_A 14 RDTEEEILQKTKQLLEKIIEEN---HTKPEDVVQMLLSATP 51 (127)
T ss_dssp SCCHHHHHHHHHHHHHHHHHHH---CCCGGGEEEEEEEECT
T ss_pred CCCHHHHHHHHHHHHHHHHHHc---CCCHHHEEEEEEEeCC
Confidence 3478999999999999998763 6788999999999764
No 80
>2ivn_A O-sialoglycoprotein endopeptidase; UP1 keops complex, Fe/Zn dependent nucleotide phosphatase, metalloprotease, hypothetical protein, zinc; HET: ANP; 1.65A {Pyrococcus abyssi} PDB: 2ivo_A 2ivp_A*
Probab=46.81 E-value=41 Score=31.19 Aligned_cols=62 Identities=16% Similarity=0.163 Sum_probs=36.5
Q ss_pred cEEEEEeCCCCeEEEEEEeecceecCCCCce-eeCHHHHHHHHHHHHHHHHHhhhhcCCCCCCeeEEEEe
Q psy1586 3 KSTIVFAASTSELLTYHKVELETLTPKEGWV-EQDPMVILHLVEECIEKCVGYLVDLDINPNDIVAIGIT 71 (431)
Q Consensus 3 ~K~~l~d~~~g~~l~~~~~~~~~~~~~~g~~-e~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~I~~I~is 71 (431)
++++|++ +|++++....++. .+..|.. +.....-.+.+..++++++++ +|++..+|++|+++
T Consensus 13 ~~val~~--~g~i~~~~~~~~~--~~~gg~~p~~~~~~h~~~l~~~i~~~L~~---agi~~~did~Ia~~ 75 (330)
T 2ivn_A 13 LGIGIVS--EDKVLANVFDTLT--TEKGGIHPKEAAEHHARLMKPLLRKALSE---AGVSLDDIDVIAFS 75 (330)
T ss_dssp EEEEEEC--SSCEEEEEEEECC--CTTCCCCHHHHHHHHHHHHHHHHHHHHHH---HTCCTTTCCEEEEE
T ss_pred eEEEEEE--CCEEEEEEEEEee--cccCCcCchhhHHHHHHHHHHHHHHHHHH---cCCCHHHCcEEEEE
Confidence 5788888 3588866555443 2333432 112223344455555666554 47788999999886
No 81
>2h3g_X Biosynthetic protein; pantothenate kinase, anthrax, type III pantothenate kinase, COAX, COAA, askha; 2.00A {Bacillus anthracis str}
Probab=45.32 E-value=24 Score=31.84 Aligned_cols=44 Identities=20% Similarity=0.304 Sum_probs=37.2
Q ss_pred CCCHHHHHHHHHhhhhHHHHHHHHHHHHhcCCCCceEEEEcCCcc
Q psy1586 365 ETSKVDIVKAALEAVCFQTRDILEAMKEDCGVALEKLLVDGGMTA 409 (431)
Q Consensus 365 ~~~~~~~~rA~~Egia~~~r~~~~~l~~~~g~~~~~i~~~GG~~~ 409 (431)
..|.+.|-..++.|.+..+..++++++++.+ +.-+|+++||.++
T Consensus 182 ~nT~~ai~sGi~~g~~g~i~~~i~~~~~e~~-~~~~vi~TGG~a~ 225 (268)
T 2h3g_X 182 KNTVSAMQSGILYGYVGQVEGIVKRMKEEAK-QEPKVIATGGLAK 225 (268)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHHHHHHHHCS-SCCEEEEESTTHH
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCCEEEEECCCHH
Confidence 4678889999999999999999999988766 3457999999875
No 82
>1zbs_A Hypothetical protein PG1100; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.30A {Porphyromonas gingivalis} SCOP: c.55.1.5 c.55.1.5
Probab=44.76 E-value=28 Score=31.51 Aligned_cols=60 Identities=12% Similarity=0.034 Sum_probs=39.5
Q ss_pred CCcEEEEEeCCCCeEEEEEEeecceecCCCCceeeCHHHHHHHHHHHHHHHHHhhhhcCCCCCCeeEEEEeccc
Q psy1586 1 MSKSTIVFAASTSELLTYHKVELETLTPKEGWVEQDPMVILHLVEECIEKCVGYLVDLDINPNDIVAIGITNQR 74 (431)
Q Consensus 1 ~s~K~~l~d~~~g~~l~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~I~~I~is~~~ 74 (431)
+++|++++| +|+++.+.+.+.. .+ ..++++.+++.+.+.++++.. .+..+|.+|+++.-+
T Consensus 10 T~~~~~l~d--~g~il~~~~~~~~----~~--~~~~~~~~~~~i~~~i~~~~~------~~~~~i~~igig~pG 69 (291)
T 1zbs_A 10 TKTDWCIAK--EGKSLGRFQTSGI----NP--FQQDRNEIDTALRSEVLPAIG------QKASSIRAVYFYGAG 69 (291)
T ss_dssp SEEEEEEEE--TTEEEEEEEEECC----CT--TTSCHHHHHHHHTTTTHHHHT------TSTTTCCEEEEEETT
T ss_pred cceEEEEEe--CCeEEEEEECCCC----Cc--ccCCHHHHHHHHHHHHHHHhC------CCcccccEEEEECCC
Confidence 368999999 6899887765321 11 124678888888887776532 223568788877654
No 83
>1ufy_A Chorismate mutase; shikimate pathway, mutant, riken structur genomics/proteomics initiative, RSGI, structural genomics,; HET: MES; 0.96A {Thermus thermophilus} SCOP: d.79.1.2 PDB: 1ode_A* 1ui9_A*
Probab=44.57 E-value=38 Score=26.42 Aligned_cols=37 Identities=19% Similarity=0.215 Sum_probs=31.1
Q ss_pred eCHHHHHHHHHHHHHHHHHhhhhcCCCC-CCeeEEEEeccc
Q psy1586 35 QDPMVILHLVEECIEKCVGYLVDLDINP-NDIVAIGITNQR 74 (431)
Q Consensus 35 ~d~~~~~~~~~~~l~~~~~~~~~~~~~~-~~I~~I~is~~~ 74 (431)
-+++++++++.+++.++++.- ++++ ++|.+|-||.+.
T Consensus 14 n~~e~I~~at~eLl~~i~~~N---~l~~~~divSv~FT~T~ 51 (122)
T 1ufy_A 14 DTPEAIHQATRELLLKMLEAN---GIQSYEELAAVIFTVTE 51 (122)
T ss_dssp SSHHHHHHHHHHHHHHHHHHH---TCCCGGGEEEEEEEECT
T ss_pred CCHHHHHHHHHHHHHHHHHhc---CCCChHhEEEEEEEeCC
Confidence 478899999999999998763 5788 999999999764
No 84
>3bex_A Type III pantothenate kinase; actin-like fold, ATP-binding, coenzyme A biosynthesis, cytoplasm, metal-binding, nucleotide-binding, potassium; HET: PAU; 1.51A {Thermotoga maritima} SCOP: c.55.1.13 c.55.1.13 PDB: 3bf1_A* 3bf3_A* 2gtd_A
Probab=43.64 E-value=29 Score=30.90 Aligned_cols=43 Identities=14% Similarity=0.266 Sum_probs=36.6
Q ss_pred CCCHHHHHHHHHhhhhHHHHHHHHHHHHhcCCCCceEEEEcCCcc
Q psy1586 365 ETSKVDIVKAALEAVCFQTRDILEAMKEDCGVALEKLLVDGGMTA 409 (431)
Q Consensus 365 ~~~~~~~~rA~~Egia~~~r~~~~~l~~~~g~~~~~i~~~GG~~~ 409 (431)
..|.+.|-..++-|.+..+..++++++++. +.-+|+++||.++
T Consensus 180 ~nT~~ai~sGi~~g~~g~i~~~i~~~~~~~--~~~~vi~TGG~a~ 222 (249)
T 3bex_A 180 KDTEENIRLGVVNGSVYALEGIIGRIKEVY--GDLPVVLTGGQSK 222 (249)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHHHHHHHHH--CCCCEEEESTTSG
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHc--CCCEEEEECCChH
Confidence 467888999999999999999999998766 4457999999986
No 85
>4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani}
Probab=42.83 E-value=37 Score=31.47 Aligned_cols=57 Identities=16% Similarity=0.170 Sum_probs=35.2
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHHHhcCCC-CceEEEEcCCccChHHHHHHhhhcCCceEecC
Q psy1586 369 VDIVKAALEAVCFQTRDILEAMKEDCGVA-LEKLLVDGGMTANKYLMQLQADLTGTPVSSSP 429 (431)
Q Consensus 369 ~~~~rA~~Egia~~~r~~~~~l~~~~g~~-~~~i~~~GG~~~s~~~~qi~Advlg~pv~~~~ 429 (431)
.+.++.+++-.+-.+...+... + +... .+.|+++||+|.- +.+.+.+.++.|+.+++
T Consensus 251 ~~~i~~~~~e~~~~I~~~i~~~-~-~~~~~~~~IvltGGGA~l--~~~~l~~~~~~~v~v~~ 308 (329)
T 4apw_A 251 STVIKKVKEKFLKDAIKLIEKR-G-FKLDQLDSLIFIGGTTQK--LKEQISKTYPNNSIITN 308 (329)
T ss_dssp THHHHHHHHHHHHHHHHHHHHH-T-CCTTSCSEEEEESTTHHH--HHHHHHHHSTTCEECCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHc-C-CCHHHccEEEEECChHHH--HHHHHHHHcCCCCEecC
Confidence 3445555554444433333332 1 2222 4689999999974 56889999998887764
No 86
>3djc_A Type III pantothenate kinase; structural genomics, putative transfera 2, protein structure initiative; 2.40A {Legionella pneumophila subsp}
Probab=38.29 E-value=44 Score=30.07 Aligned_cols=30 Identities=10% Similarity=0.081 Sum_probs=20.6
Q ss_pred CchHHhHHhcccCCC--CcEEEEecccceecc
Q psy1586 237 GDQQSALVGQSCLQA--GQAKNTYGTGCFLLY 266 (431)
Q Consensus 237 ~D~~aa~~g~g~~~~--g~~~~~~GTs~~i~~ 266 (431)
.|-.++++|+-..-+ .-+++.+||...+-+
T Consensus 109 ~DR~~~~vaA~~~~~~~~~iVVD~GTA~T~d~ 140 (266)
T 3djc_A 109 ADRIANAIAATHSFPNQNIIVIDFGTATTFCA 140 (266)
T ss_dssp HHHHHHHHHHHHHSTTSEEEEEEESSEEEEEE
T ss_pred HHHHHHHHHHHHhcCCCCEEEEECCCeeEEEE
Confidence 477888888655433 356788999866544
No 87
>2ov7_A 50S ribosomal protein L1; 2.30A {Thermus thermophilus} PDB: 2oum_A 2vpl_A
Probab=36.52 E-value=96 Score=24.77 Aligned_cols=52 Identities=8% Similarity=0.029 Sum_probs=39.8
Q ss_pred CCceeeCHHHHHHHHHHHHHHHHHhhhhcCCCCCCeeEEEEecccceEEEeeC
Q psy1586 30 EGWVEQDPMVILHLVEECIEKCVGYLVDLDINPNDIVAIGITNQRETTIVWDS 82 (431)
Q Consensus 30 ~g~~e~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~I~~I~is~~~~~~v~~d~ 82 (431)
-|....+++++.+-+...+..+.+..++ +.....|+.|.++++|.-.+.+|.
T Consensus 84 VGk~sf~~e~L~eNi~a~i~~l~~~kp~-~~kg~~ik~v~issTMGp~i~id~ 135 (137)
T 2ov7_A 84 VGKASFPPEKLADNIRAFIRALEAHKPE-GAKGTFLRSVYVTTTMGPSVRINP 135 (137)
T ss_dssp EEETTSCHHHHHHHHHHHHHHHHTTSCS-SCCSCSEEEEEEEETTSCCEEBCT
T ss_pred EecCCCCHHHHHHHHHHHHHHHHHhCcc-cccCceEEEEEEECCCCCCEEecC
Confidence 3566789999999999999888765432 222247999999998887777875
No 88
>4am6_A Actin-like protein ARP8; nuclear protein, chromatin remodelling complex, ATP-binding nuclear actin-related protein; 2.70A {Saccharomyces cerevisiae} PDB: 4am7_A*
Probab=35.93 E-value=13 Score=38.00 Aligned_cols=46 Identities=17% Similarity=0.181 Sum_probs=30.9
Q ss_pred HHHHhhhhHHHHH-HHHHHHHhcCCCCceEEEEcCCccChHHHHHHhhhcC
Q psy1586 373 KAALEAVCFQTRD-ILEAMKEDCGVALEKLLVDGGMTANKYLMQLQADLTG 422 (431)
Q Consensus 373 rA~~Egia~~~r~-~~~~l~~~~g~~~~~i~~~GG~~~s~~~~qi~Advlg 422 (431)
.||+|+|...... -...+++. .+.|.++|||+|-+-+--++-|-++
T Consensus 479 kAIi~SIt~a~~~~d~~k~~~~----y~nilivGggski~g~~~~L~dri~ 525 (655)
T 4am6_A 479 KAIVQSIANASITADVTRMNSF----YSNILIVGGSSKIPALDFILTDRIN 525 (655)
T ss_dssp HHHHHHHHHHHHTSCGGGHHHH----HTCEEEESTTCCCTTHHHHHHHHHH
T ss_pred HHHHHHHHhhhccccHHHHHHH----hhcEEEEcCcccCccHHHHHHHHHH
Confidence 5677777655443 23333333 3579999999999888888877665
No 89
>2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A
Probab=33.25 E-value=80 Score=30.83 Aligned_cols=67 Identities=3% Similarity=-0.129 Sum_probs=40.3
Q ss_pred CCcEEEEEeCCCCeE---EEEEEeecceecCCCCceeeCHHHHHHHHHHHHHHHHHhhhhcCCCCCCeeEEEEeccc
Q psy1586 1 MSKSTIVFAASTSEL---LTYHKVELETLTPKEGWVEQDPMVILHLVEECIEKCVGYLVDLDINPNDIVAIGITNQR 74 (431)
Q Consensus 1 ~s~K~~l~d~~~g~~---l~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~I~~I~is~~~ 74 (431)
.++|++++|. +|+. +...+.+.| .+ ..+-+++++++.+.+++++++++... ......+.+|+|+.-+
T Consensus 71 Tnirv~lV~~-~G~~~~~~~~~~~~ip----~~-~~~~~~~~lfd~Ia~~i~~~~~~~~~-~~~~~~~lGi~fs~P~ 140 (457)
T 2yhx_A 71 GDLEVILISL-AGRQESSIXASRSLAA----AM-STTAIPSDLWGNXAXSNAAFSSXEFS-SXAGSVPLGFTFXEAG 140 (457)
T ss_dssp SEEEEEEEEE-ETTEEEEEEEEEECCT----TT-TSCSCTHHHHHHHHHHHHHHHHHHTS-SCSSCEEEEEECCSCC
T ss_pred CeEEEEEEEe-CCCeeEEEeeEEEEcC----Cc-cCCCCHHHHHHHHHHHHHHHHhhccc-ccccccceeeEEEEEE
Confidence 4789999994 8887 444443332 11 11237789999999999998765210 0011124566666544
No 90
>2d0o_A DIOL dehydratase-reactivating factor large subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 PDB: 2d0p_A
Probab=32.38 E-value=58 Score=32.66 Aligned_cols=68 Identities=18% Similarity=0.224 Sum_probs=44.8
Q ss_pred eeEecCCCCCCHHHHHHHHHhh---hhHHHHHHHHHHHHhcCCC-----CceEEEEcCCccChHHHHHHhhhcCC-ceEe
Q psy1586 357 SIICGLTDETSKVDIVKAALEA---VCFQTRDILEAMKEDCGVA-----LEKLLVDGGMTANKYLMQLQADLTGT-PVSS 427 (431)
Q Consensus 357 g~~~gl~~~~~~~~~~rA~~Eg---ia~~~r~~~~~l~~~~g~~-----~~~i~~~GG~~~s~~~~qi~Advlg~-pv~~ 427 (431)
..+..+...++-++ ++-+-+- ..|-. ..++++... ... +..|+++||+|+-+-+.++..++|++ +|++
T Consensus 503 ~~L~~I~pR~~vEE-lelVR~~ak~~vfv~-n~Lralg~~-~~~g~~r~i~~VVLTGGsSql~GI~ElA~~iL~~y~VRi 579 (610)
T 2d0o_A 503 DELVPLPGDLALEK-VRAIRRSAKERVFVT-NALRALRQV-SPTGNIRDIPFVVLVGGSSLDFEVPQLVTDALAHYRLVA 579 (610)
T ss_dssp SCEEECCTTCCHHH-HHHHHHHHHHHHHHH-HHHHHHHHH-SSSSCGGGCCEEEEESGGGGCSSHHHHHHHHTTTSSCEE
T ss_pred cceeeeCCCcchHH-HHHHHHHHhhhhhhH-HHHHhcCCc-cCCCcccccCCEEEeCchhhcccHHHHHHHHhCcCCeEE
Confidence 55556654555666 4444333 22221 235565432 212 37899999999999999999999999 8875
No 91
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A
Probab=31.02 E-value=94 Score=27.53 Aligned_cols=57 Identities=12% Similarity=0.193 Sum_probs=34.2
Q ss_pred CCcEEEEEeCCCCeEEEEEEeecceecCCCCceeeCHHHHHHHHHHHHHHHHHhhhhcCCCCCCeeEEEEecccc
Q psy1586 1 MSKSTIVFAASTSELLTYHKVELETLTPKEGWVEQDPMVILHLVEECIEKCVGYLVDLDINPNDIVAIGITNQRE 75 (431)
Q Consensus 1 ~s~K~~l~d~~~g~~l~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~I~~I~is~~~~ 75 (431)
.++|++++| +++++++....+. |... +. ..+.++++.+++ +....++.++++++...
T Consensus 11 T~tk~av~d-~~~~il~~~~~~~-------g~~~---e~----a~~vl~~~~~~a---~~~~~~~~~~a~t~~~~ 67 (276)
T 4ehu_A 11 TASKGVILK-NGEDIVASETISS-------GTGT---TG----PSRVLEKLYGKT---GLAREDIKKVVVTGYGR 67 (276)
T ss_dssp SCEEEEEEE-TTTEEEEEEEESC-------CTTS---SH----HHHHHHHHHHHH---CCCGGGEEEEEEESTTG
T ss_pred cEEEEEEEE-CCCeEEEEEEecC-------CCCH---HH----HHHHHHHHHHHC---CCcchhccccccCchHH
Confidence 478999999 6899987655432 1111 11 122344454432 55567888888877553
No 92
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6
Probab=30.91 E-value=21 Score=35.81 Aligned_cols=69 Identities=14% Similarity=0.225 Sum_probs=43.1
Q ss_pred eeEecCCCCCCHHHHHHHHHhh---hhHHHHHHHHHHHHhc--C--CCCceEEEEcCCccChHHHHHHhhhcCC-ceEe
Q psy1586 357 SIICGLTDETSKVDIVKAALEA---VCFQTRDILEAMKEDC--G--VALEKLLVDGGMTANKYLMQLQADLTGT-PVSS 427 (431)
Q Consensus 357 g~~~gl~~~~~~~~~~rA~~Eg---ia~~~r~~~~~l~~~~--g--~~~~~i~~~GG~~~s~~~~qi~Advlg~-pv~~ 427 (431)
..+..+...++-++ ++-+-+- ..|-. ..++++.... + ..+..|+++||+|+-+-+.++..++|++ +|++
T Consensus 505 ~~L~~I~~R~~vEE-lelVR~~ak~~vfv~-n~Lralg~~~~~g~~r~i~~VVLTGGsSql~gI~elA~~iL~~~~VRi 581 (607)
T 1nbw_A 505 GELVPIDNASPLEK-IRLVRRQAKEKVFVT-NCLRALRQVSPGGSIRDIAFVVLVGGSSLDFEIPQLITEALSHYGVVA 581 (607)
T ss_dssp TEEEEECCSSCHHH-HHHHHHHHHHHHHHH-HHHHHHSSSSTTCCSTTCCEEEEESGGGGSSSHHHHHHHHHHTTTCEE
T ss_pred cceeeeCCCcchHH-HHHHHHHHhhhhhhH-HHHHhcCCcccCCcccccCCEEEeCchhhcccHHHHHHHHhCcCCeEE
Confidence 55556655555666 4444332 12211 2244443210 1 1237899999999999999999999999 8875
No 93
>1dw0_A Cytochrome C; asparagine ligation, oxygen binding, disulfide bridge, oxygen storage/transport complex; HET: HEM; 1.82A {Rhodobacter sphaeroides} SCOP: a.3.1.1 PDB: 1dw1_A* 1dw2_A* 1dw3_A*
Probab=29.50 E-value=15 Score=28.35 Aligned_cols=33 Identities=24% Similarity=0.495 Sum_probs=24.7
Q ss_pred HHHH-HHHHhcchHHHHhhhcCcccccChhHHHHHHhc
Q psy1586 130 AVKL-NWLMDNVDEVKNAIKDNKCLFGTVDSWLIWNLT 166 (431)
Q Consensus 130 ~~kl-~wl~~~~p~~~~~~~~~~~~~~~~~d~l~~~LT 166 (431)
+.|+ .|+++|..+++.+- +.-..-.|||.|++|
T Consensus 78 ~akvekwf~rnc~~v~gr~----cta~EK~d~l~~l~~ 111 (112)
T 1dw0_A 78 SARVEKWLGRNCNSVIGRD----CTPGEKADLLAWLAA 111 (112)
T ss_dssp HHHHHHHHHHHHHHHHSSC----CCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhhhhHHHccc----CCHHHHHHHHHHHHh
Confidence 4454 59999999998753 445556899999987
No 94
>4h0p_A Acetate kinase; askha (acetate and sugar kinas actin) superfamily, ribonuclease H-like fold, transferase; 1.89A {Cryptococcus neoformans}
Probab=28.28 E-value=28 Score=33.68 Aligned_cols=50 Identities=10% Similarity=0.022 Sum_probs=38.0
Q ss_pred HHHHHHhhhhHHHHHHHHHHHHhcC-----CCCceEEEEcCCc-cChHHHHHHhhh
Q psy1586 371 IVKAALEAVCFQTRDILEAMKEDCG-----VALEKLLVDGGMT-ANKYLMQLQADL 420 (431)
Q Consensus 371 ~~rA~~Egia~~~r~~~~~l~~~~g-----~~~~~i~~~GG~~-~s~~~~qi~Adv 420 (431)
-++-++|-.+|.++..+-.+.-.++ ..++.|+++||.. +++.+++.+.+-
T Consensus 321 ~A~lA~d~f~yri~k~IGa~aa~L~~~~~~G~vDaIVFTGGIGEns~~iR~~i~~~ 376 (438)
T 4h0p_A 321 KAKLTYAVFLDRLLNFVAQYLFKLLSEVPIESIDGLVFSGGIGEKGAELRRDVLKK 376 (438)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTSCGGGSCEEEEEHHHHHHCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCccccCCCCCEEEECCccccCcHHHHHHHHHh
Confidence 4667889999999888877765444 2678999999985 778887765543
No 95
>1eik_A RNA polymerase subunit RPB5; RPBH, OCSP, NESG, protein structure initiative, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus} SCOP: d.78.1.1
Probab=27.50 E-value=40 Score=24.05 Aligned_cols=21 Identities=24% Similarity=0.498 Sum_probs=17.1
Q ss_pred cHHHHhhcCCCCCCCCccccC
Q psy1586 195 EPQLLKFFNIPSQILPQIRSS 215 (431)
Q Consensus 195 ~~~~l~~~gi~~~~lP~i~~~ 215 (431)
-+++|+.+++..++||.|...
T Consensus 22 k~~lL~~y~i~~~qLP~I~~~ 42 (77)
T 1eik_A 22 AKRVLKELDAHPEQLPKIKTT 42 (77)
T ss_dssp HHHHHHHTTCCTTTSCCCBTT
T ss_pred HHHHHHHcCCCHHHCCeeeCc
Confidence 357899999999999988544
No 96
>2h3g_X Biosynthetic protein; pantothenate kinase, anthrax, type III pantothenate kinase, COAX, COAA, askha; 2.00A {Bacillus anthracis str}
Probab=27.34 E-value=1.5e+02 Score=26.49 Aligned_cols=55 Identities=18% Similarity=0.184 Sum_probs=34.2
Q ss_pred CcEEEEEeCCCCeEEEEEEeecceecCCCCceeeCHHHHHHHHHHHHHHHHHhhhhcCCCCCCeeEEEEecc
Q psy1586 2 SKSTIVFAASTSELLTYHKVELETLTPKEGWVEQDPMVILHLVEECIEKCVGYLVDLDINPNDIVAIGITNQ 73 (431)
Q Consensus 2 s~K~~l~d~~~g~~l~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~I~~I~is~~ 73 (431)
++|..+|| +++++...+.+.+. ....+++...+.+.++. .++++.+|.+|.+|+.
T Consensus 11 ~ik~gl~~--~~~l~~~~r~~T~~--------~~t~de~~~~l~~ll~~-------~~~~~~~i~~iiISSV 65 (268)
T 2h3g_X 11 NAVLGVFE--EGELRQHWRMETDR--------HKTEDEYGMLVKQLLEH-------EGLSFEDVKGIIVSSV 65 (268)
T ss_dssp EEEEEEEE--TTEEEEEEEEECCT--------TCCHHHHHHHHHHHHHH-------TTCCGGGCCEEEEEES
T ss_pred cEEEEEEE--CCEEEEEEEecCCC--------cCCHHHHHHHHHHHHHH-------cCCCcccCcEEEEEcc
Confidence 67899999 46777666554321 23566776666554432 2445567888888753
No 97
>2gvs_A Chemosensory protein CSP-SG4; alpha-coil, lipid binding protein; NMR {Schistocerca gregaria}
Probab=23.39 E-value=50 Score=25.26 Aligned_cols=47 Identities=17% Similarity=0.088 Sum_probs=30.4
Q ss_pred ccHHHHHHHHhhccChhHHHhHhCC-CCCc--cchHHH-HHHHHhcchHHHHhhh
Q psy1586 98 RTKSIVDTYASKIKNTTFLTTICGL-PIST--YFSAVK-LNWLMDNVDEVKNAIK 148 (431)
Q Consensus 98 R~~~~~~~l~~~~~~~~~~~~~tG~-~~~~--~~~~~k-l~wl~~~~p~~~~~~~ 148 (431)
++.++.++|.+.++ +.+. |++ ..++ -..+-| +.||.+|.|+.|+++.
T Consensus 37 pCtpegk~lK~~lp--eAl~--t~C~KCTekQK~~~~kvi~~l~~n~P~~W~~L~ 87 (109)
T 2gvs_A 37 NCTADGKELKSVIP--DALS--NECAKCNEKQKEGTKKVLKHLINHKPDVWAQLK 87 (109)
T ss_dssp TCCTTHHHHHHHTT--HHHH--STTTTSCHHHHHHHHHHHHHHHHHCHHHHHHHH
T ss_pred CCCHHHHHHHHHhH--HHHh--ccCCCCCHHHHHHHHHHHHHHHHcChHHHHHHH
Confidence 56667788888776 4442 443 2333 223334 5699999999998874
No 98
>2q2r_A Glucokinase 1, putative; ATPase hexose kinase family, transferase; HET: BGC ADP; 2.10A {Trypanosoma cruzi}
Probab=23.34 E-value=57 Score=30.66 Aligned_cols=72 Identities=13% Similarity=-0.033 Sum_probs=43.3
Q ss_pred CcEEEEEeCC----CCeEEEEEEeecceecCCCCceeeCHHHHHHHHHHHHHHHHHhhhhcCCCCCCeeEEEEecccceE
Q psy1586 2 SKSTIVFAAS----TSELLTYHKVELETLTPKEGWVEQDPMVILHLVEECIEKCVGYLVDLDINPNDIVAIGITNQRETT 77 (431)
Q Consensus 2 s~K~~l~d~~----~g~~l~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~I~~I~is~~~~~~ 77 (431)
++|++++| . +|+++...+. ++ . .+++.+.+.+.+.++++.... +.+|.+|+|+.-+
T Consensus 40 ~i~~~l~d-~~~~~~g~il~~~~~-~~----~-----~~~~~~~~~i~~~i~~~~~~~------~~~i~gigi~~pG--- 99 (373)
T 2q2r_A 40 SARMGFVR-EGKNDSVHACVTRYS-MK----R-----KDITEIIEFFNEIIELMPASV------MKRVKAGVINVPG--- 99 (373)
T ss_dssp EEEEEEEE-ECGGGCEEEEEEEEE-CT----T-----CBGGGHHHHHHHHHHHSCHHH------HTTEEEEEEEESS---
T ss_pred cEEEEEEe-cccCCCccEEEEeee-cC----C-----CCHHHHHHHHHHHHHHHhhcc------cccccEEEEEeec---
Confidence 57899999 5 7888876541 11 1 256677777777776643321 2468888887655
Q ss_pred EEeeCCCCccccccceecC
Q psy1586 78 IVWDSTTGKPLYNAIVWSD 96 (431)
Q Consensus 78 v~~d~~~g~pl~~~i~w~D 96 (431)
++|. |....+...|.+
T Consensus 100 -~vd~--g~v~~~~~~~~~ 115 (373)
T 2q2r_A 100 -PVTG--GAVGGPFNNLKG 115 (373)
T ss_dssp -CEET--TTEECCCSSSBS
T ss_pred -cccC--CEEeccCCCCCC
Confidence 2454 554434334554
No 99
>3eno_A Putative O-sialoglycoprotein endopeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc, keops complex, ATPase, metal ION binding; 3.02A {Thermoplasma acidophilum}
Probab=22.91 E-value=90 Score=28.95 Aligned_cols=62 Identities=16% Similarity=0.196 Sum_probs=33.8
Q ss_pred EEEEEeCCCCeEEEEEEeecceecCCCCce-eeCHHHHHHHHHHHHHHHHHhhhhcCCCCCCeeEEEEec
Q psy1586 4 STIVFAASTSELLTYHKVELETLTPKEGWV-EQDPMVILHLVEECIEKCVGYLVDLDINPNDIVAIGITN 72 (431)
Q Consensus 4 K~~l~d~~~g~~l~~~~~~~~~~~~~~g~~-e~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~I~~I~is~ 72 (431)
-++|++ ++++++.....+. .+..|.. |.....-.+.+..++++++++ ++++.++|++|+++.
T Consensus 19 svAl~~--~~~i~~~~~~~~~--~~~gGv~p~~a~~~H~~~l~~~i~~~L~~---ag~~~~did~Iav~~ 81 (334)
T 3eno_A 19 SCGIID--ESRILAMESSMYR--PKTGGIRPLDAAVHHSEVIDTVISRALEK---AKISIHDIDLIGFSM 81 (334)
T ss_dssp EEEEEE--SSCCCEEEEEECC--CSSCSCCHHHHHHHHHHHHHHHHHHHHHH---HTCCGGGCCEEEEEC
T ss_pred EEEEEE--CCEEEEEEEEeec--cccCCcCcchHHHHHHHHHHHHHHHHHHH---cCCCHHHCCEEEEEc
Confidence 456777 3577765444332 2233432 111223334455555555544 477889999999874
No 100
>1mzp_A 50S ribosomal protein L1P; ribosome, RNA-protein complex; 2.65A {Sulfolobus acidocaldarius} SCOP: e.24.1.1 PDB: 1pnu_5 1pny_5 1vor_7 1vou_7 1vow_7 1voy_7 1vp0_7 3e1b_Z 3e1d_Z
Probab=21.86 E-value=84 Score=27.24 Aligned_cols=47 Identities=6% Similarity=-0.003 Sum_probs=37.9
Q ss_pred CceeeCHHHHHHHHHHHHHHHHHhhhhcCCCCCCeeEEEEecccceEEEee
Q psy1586 31 GWVEQDPMVILHLVEECIEKCVGYLVDLDINPNDIVAIGITNQRETTIVWD 81 (431)
Q Consensus 31 g~~e~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~I~~I~is~~~~~~v~~d 81 (431)
|...++++++.+-+..++..+.+.++. ...|+.|.++++|.-.+.+|
T Consensus 170 G~~~~~~e~L~eNi~a~i~~l~~~~p~----~~~ik~v~lksTmgp~i~i~ 216 (217)
T 1mzp_A 170 GTEDMKPEDLAENAIAVLNAIENKAKV----ETNLRNIYVKTTMGKAVKVK 216 (217)
T ss_dssp EETTSCHHHHHHHHHHHHHHHHHHCCC----TTTEEEEEEEETTSCCEECC
T ss_pred eCCCCCHHHHHHHHHHHHHHHHHhCcc----chheEEEEEECCCCCCeeCC
Confidence 556789999999999999988876532 26899999999887666665
No 101
>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A*
Probab=21.84 E-value=1.3e+02 Score=26.84 Aligned_cols=56 Identities=11% Similarity=0.065 Sum_probs=32.6
Q ss_pred HHHHHHhhhhHHHHHHHHHHHHhcCCCCceEEEEcCCccChHHHHHHhhhcC-CceEec
Q psy1586 371 IVKAALEAVCFQTRDILEAMKEDCGVALEKLLVDGGMTANKYLMQLQADLTG-TPVSSS 428 (431)
Q Consensus 371 ~~rA~~Egia~~~r~~~~~l~~~~g~~~~~i~~~GG~~~s~~~~qi~Advlg-~pv~~~ 428 (431)
.++.+++-.+..+...+..+...+ +++.|++.||.++++.+.+.+...+. .+|+.+
T Consensus 215 ~a~~il~~~~~~La~~i~~l~~~l--~p~~IvlgGgv~~~~~~~~~l~~~~~~~~i~~~ 271 (299)
T 2e2o_A 215 VAMDILKQGAELLASQAVYLARKI--GTNKVYLKGGMFRSNIYHKFFTLYLEKEGIISD 271 (299)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH--TCSEEEEESGGGGSHHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhc--CCCEEEEECCccCcHHHHHHHHHHCCCCeEecc
Confidence 344555555555555555554432 67889999999887655554444332 355543
No 102
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A*
Probab=21.74 E-value=1.7e+02 Score=27.52 Aligned_cols=49 Identities=16% Similarity=0.248 Sum_probs=31.7
Q ss_pred HHHHHhhhhHHHHHHHHHHHHhcCCCCceEEEEcCCccChH-HHHHHhhh
Q psy1586 372 VKAALEAVCFQTRDILEAMKEDCGVALEKLLVDGGMTANKY-LMQLQADL 420 (431)
Q Consensus 372 ~rA~~Egia~~~r~~~~~l~~~~g~~~~~i~~~GG~~~s~~-~~qi~Adv 420 (431)
++.+++-.+..+...+-.+...++.+++.|+++||.+++.. +.+.+.+.
T Consensus 270 a~~~l~~~~~~la~~i~~l~~~l~~~p~~IvlgGgi~~~~~~l~~~i~~~ 319 (381)
T 1saz_A 270 AKRVYRAMAYQIAKWIGKMAAVLKGEVDFIVLTGGLAHEKEFLVPWITKR 319 (381)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTTCCSEEEEEEGGGGCTTTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCcCccChHHHHHHHHHH
Confidence 45566666777767666665544337899999999988533 44444433
No 103
>2ftc_A Mitochondrial ribosomal protein L1; mitochondrial ribosome, large ribosomal subunit, ribosomal R ribosome; 12.10A {Bos taurus}
Probab=21.38 E-value=1.3e+02 Score=25.47 Aligned_cols=51 Identities=6% Similarity=-0.033 Sum_probs=39.6
Q ss_pred CCceeeCHHHHHHHHHHHHHHHHHhhhhcCCCCCCeeEEEEecccceEEEeeC
Q psy1586 30 EGWVEQDPMVILHLVEECIEKCVGYLVDLDINPNDIVAIGITNQRETTIVWDS 82 (431)
Q Consensus 30 ~g~~e~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~I~~I~is~~~~~~v~~d~ 82 (431)
-|....+++++.+-+...+..+.+..++ +. ...|+.+.++++|.--+.+|-
T Consensus 135 VG~~~~~~e~L~eNi~a~i~~l~~~~p~-~~-g~~ik~v~lssTmgp~i~i~~ 185 (189)
T 2ftc_A 135 IATLDMSSDQIAANLQAVINEVCRHRPL-NL-GPFVVRAFLRSSTSEGLLLKI 185 (189)
T ss_pred EECCCCCHHHHHHHHHHHHHHHHHhCch-hc-CccEEEEEEECCCCCCEEEeh
Confidence 3667889999999999999888876543 22 256999999998877777764
No 104
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A*
Probab=20.63 E-value=63 Score=30.10 Aligned_cols=48 Identities=10% Similarity=0.077 Sum_probs=30.9
Q ss_pred HHHHhhhhHHHHHHHHH-HHHhcCCCCceEEEEcCCccChHHHHHHhhhcCC
Q psy1586 373 KAALEAVCFQTRDILEA-MKEDCGVALEKLLVDGGMTANKYLMQLQADLTGT 423 (431)
Q Consensus 373 rA~~Egia~~~r~~~~~-l~~~~g~~~~~i~~~GG~~~s~~~~qi~Advlg~ 423 (431)
+.+++.++-.+...++. |++ ..-.++.|+++||+|+- +.+.+.+.|+.
T Consensus 272 ~~~i~~~~~~i~~~i~~~l~~-~~~~i~~IvL~GGga~l--l~~~l~~~~~~ 320 (346)
T 2fsj_A 272 GPILEDLANRIIENIRLNLRG-EVDRVTSLIPVGGGSNL--IGDRFEEIAPG 320 (346)
T ss_dssp HHHHHHHHHHHHHHHHHHHGG-GGGGEEEEEEESTTHHH--HGGGGGGGSTT
T ss_pred HHHHHHHHHHHHHHHHHHHHh-hhhcccEEEEECCcHHH--HHHHHHHHCcC
Confidence 55555555555444444 333 22245889999999985 77888888874
No 105
>4h0o_A Acetate kinase; askha (acetate and S kinase, HSC70, actin) superfamily, ribonuclease H-like fold transferase; 2.40A {Entamoeba histolytica}
Probab=20.16 E-value=1.1e+02 Score=29.28 Aligned_cols=49 Identities=14% Similarity=0.129 Sum_probs=37.2
Q ss_pred HHHHHHHhhhhHHHHHHHHHHHHhcCCCCceEEEEcCCc-cChHHHHHHhh
Q psy1586 370 DIVKAALEAVCFQTRDILEAMKEDCGVALEKLLVDGGMT-ANKYLMQLQAD 419 (431)
Q Consensus 370 ~~~rA~~Egia~~~r~~~~~l~~~~g~~~~~i~~~GG~~-~s~~~~qi~Ad 419 (431)
.-++-++|-.+|.++..+-.+.-.+|. ++.|+++||.. +++.+++.+.+
T Consensus 300 ~~A~lA~d~f~yri~k~IGa~aa~L~G-vDaIVFTgGIGEns~~vR~~i~~ 349 (404)
T 4h0o_A 300 KTCQLAFDVYIKQLAKTIGGLMVEIGG-LDLLVFTDQMGLEVWQVRKAICD 349 (404)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTC-CSEEEEEHHHHHHCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcC-CCEEEECCccccCcHHHHHHHHh
Confidence 345668888999999888777655564 89999999985 56777766554
Done!