RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy1586
(431 letters)
>2w40_A Glycerol kinase, putative; closed conformation, malaria,
transferase, sugar kinase/HSP70/actin superfamily, open
conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*
Length = 503
Score = 617 bits (1594), Expect = 0.0
Identities = 178/425 (41%), Positives = 251/425 (59%), Gaps = 13/425 (3%)
Query: 6 IVFAASTSELLTYHKVELETLTPKEGWVEQDPMVILHLVEECIEKCVGYLVDLDINPNDI 65
+ ++ + + E K GW E DP+ I+ + + + + ++ I
Sbjct: 19 FFYDEE-LNIVHSNNLNHEQKCLKPGWYEHDPIEIMTNLYNLMNEGIK-VLKDKYTSVII 76
Query: 66 VAIGITNQRETTIVWDSTTGKPLYNAIVWSDVRTKSIVDTYASKIKNTTFLTTICGLPIS 125
IGITNQRET I+WD TGKPLYNAIVW D R + +V +++K N G +
Sbjct: 77 KCIGITNQRETVIIWDRITGKPLYNAIVWLDTRVEELVTEFSAKYNNNDI-QKKTGTYFN 135
Query: 126 TYFSAVKLNWLMDNVDEVKNAIKDNKCLFGTVDSWLIWNLTGGVDGGLHITDVTNASRTL 185
TYFSA K+ WL+ N E+K I D + G +++WLI+NLT G TDVTNASRTL
Sbjct: 136 TYFSAFKILWLIQNNPEIKQKIDDGTAVIGNINTWLIFNLTKGN----CYTDVTNASRTL 191
Query: 186 LMNLRTLQWEPQLLKFFNIP-SQILPQIRSSSEIYGCLKD---GPLQGVPISGILGDQQS 241
LM++ TLQW+ ++ K FNI +LP+I+S+ +G +K +PI+G +GDQQS
Sbjct: 192 LMDINTLQWDEKMCKIFNITNMSVLPEIKSNCSNFGLVKSEHVPDYLNIPITGCIGDQQS 251
Query: 242 ALVGQSCLQAGQAKNTYGTGCFLLYNTGTAIVHSSQGLLTTVAYQFGARAPITYALEGSI 301
A +GQ+ G+AK TYGTG FLL NTG +V+S+ GL+TT+ Y+F YALEGSI
Sbjct: 252 ACIGQAIFDEGEAKCTYGTGVFLLINTGEKVVYSTCGLITTICYKFNDNDKPKYALEGSI 311
Query: 302 AVAGQTFKWLRDNLNIIADLNEIESLVQKSSSHTDVVFVPAFSGLYAPYWQRDARSIICG 361
AG WL N +I D +E +++K + T V+FVPAFSGLYAP W+ DAR+ I G
Sbjct: 312 GTAGSGVSWLLKN-KLIDDPSEASDIMEKCENTTGVIFVPAFSGLYAPRWRSDARASIYG 370
Query: 362 LTDETSKVDIVKAALEAVCFQTRDILEAMKEDCGV-ALEKLLVDGGMTANKYLMQLQADL 420
+T T + IV+A LE + FQ +I++++ D G+ L L DGGMT NK MQ +D+
Sbjct: 371 MTFNTERSHIVRALLEGIAFQLNEIVDSLTSDMGIEMLHVLRCDGGMTKNKPFMQFNSDI 430
Query: 421 TGTPV 425
T +
Sbjct: 431 INTKI 435
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif,
actin- like ATPase domain, transferase; 2.30A
{Cellulomonas SP}
Length = 504
Score = 615 bits (1588), Expect = 0.0
Identities = 216/426 (50%), Positives = 277/426 (65%), Gaps = 17/426 (3%)
Query: 6 IVFAASTSELLTYHKVELETLTPKEGWVEQDPMVILHLVEECIEKCVGYLVDLDINPNDI 65
IVF S E+ + ++E + + P+ GWVE +P I + V E + L ++ DI
Sbjct: 17 IVFDHS-GEIYSTGQLEHDQIFPRAGWVEHNPEQIWNNVREVVGLA---LTRGNLTHEDI 72
Query: 66 VAIGITNQRETTIVWDSTTGKPLYNAIVWSDVRTKSIVDT-----YASKIKNTTFLTTIC 120
A+GITNQRET +VWD TTGKP+YNAIVW D RT+ IVD A K K+
Sbjct: 73 AAVGITNQRETAVVWDKTTGKPVYNAIVWQDTRTQKIVDELGGDEGAEKYKSIV------ 126
Query: 121 GLPISTYFSAVKLNWLMDNVDEVKNAIKDNKCLFGTVDSWLIWNLTGGVDGGLHITDVTN 180
GLP++TYFS K+ W++DNV+ + + LFG D+W++WN+TGG +GG+H+TDVTN
Sbjct: 127 GLPLATYFSGPKIKWILDNVEGAREKAEKGDLLFGNTDTWVLWNMTGGTEGGVHVTDVTN 186
Query: 181 ASRTLLMNLRTLQWEPQLLKFFNIPSQILPQIRSSSEIYG-CLKDGPLQGVPISGILGDQ 239
ASRT+LM+L TL W + IP +LP IRSSSE+YG G + GVPI+GILGDQ
Sbjct: 187 ASRTMLMDLDTLSWREDIAADMGIPLSMLPDIRSSSEVYGHGRPRGLVPGVPIAGILGDQ 246
Query: 240 QSALVGQSCLQAGQAKNTYGTGCFLLYNTGTAIVHSSQGLLTTVAYQFGARAPITYALEG 299
Q+A GQ+C + GQAKNTYGTG FLL NTGT V S GLLTTV Y+ G AP YALEG
Sbjct: 247 QAATFGQACFEVGQAKNTYGTGNFLLLNTGTEKVMSKNGLLTTVCYKIG-DAPAVYALEG 305
Query: 300 SIAVAGQTFKWLRDNLNIIADLNEIESLVQKSSSHTDVVFVPAFSGLYAPYWQRDARSII 359
SIAV G +WLRDNL + D ++E L K + FVPAFSGL+APYW+ DAR +
Sbjct: 306 SIAVTGSLVQWLRDNLGMFEDAPDVEWLAGKVQDNGGAYFVPAFSGLFAPYWRPDARGAL 365
Query: 360 CGLTDETSKVDIVKAALEAVCFQTRDILEAMKEDCGVALEKLLVDGGMTANKYLMQLQAD 419
GLT ++ I +AALEA FQ+R++++AM D GV L +L VDGGM AN+ LMQ QAD
Sbjct: 366 VGLTRYVNRNHIARAALEATAFQSREVVDAMNADSGVDLTELRVDGGMVANELLMQFQAD 425
Query: 420 LTGTPV 425
G V
Sbjct: 426 QLGVDV 431
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti
binding, phosphoprotein, transferase; 1.73A
{Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X
3h45_X 3d7e_O 1r59_O 1xup_O
Length = 506
Score = 593 bits (1532), Expect = 0.0
Identities = 180/411 (43%), Positives = 246/411 (59%), Gaps = 21/411 (5%)
Query: 22 ELETLTPKEGWVEQDPMVILHLVEECIEKCVGYLVDLDINPNDIVAIGITNQRETTIVWD 81
E PK GWVE + I + V+ I ++ I P I IGITNQRETT+VWD
Sbjct: 35 EFPQYFPKSGWVEHNANEIWNSVQSVIAGA---FIESGIRPEAIAGIGITNQRETTVVWD 91
Query: 82 STTGKPLYNAIVWSDVRTKSIVDT-----YASKIKNTTFLTTICGLPISTYFSAVKLNWL 136
TTG+P+ NAIVW ++ I D + I T GL I YFSA K+ WL
Sbjct: 92 KTTGQPIANAIVWQSRQSSPIADQLKVDGHTEMIHEKT------GLVIDAYFSATKVRWL 145
Query: 137 MDNVDEVKNAIKDNKCLFGTVDSWLIWNLTGGVDGGLHITDVTNASRTLLMNLRTLQWEP 196
+DN++ + + + LFGT+DSWL+W LT G +H+TD +NASRT+L N+ L+W+
Sbjct: 146 LDNIEGAQEKADNGELLFGTIDSWLVWKLTDG---QVHVTDYSNASRTMLYNIHKLEWDQ 202
Query: 197 QLLKFFNIPSQILPQIRSSSEIYGCLKDGPLQG--VPISGILGDQQSALVGQSCLQAGQA 254
++L NIPS +LP+++S+SE+YG + G VPI+G+ GDQQ+AL GQ + G
Sbjct: 203 EILDLLNIPSSMLPEVKSNSEVYGHTRSYRFYGSEVPIAGMAGDQQAALFGQMAFEKGMI 262
Query: 255 KNTYGTGCFLLYNTGTAIVHSSQGLLTTVAYQFGARAPITYALEGSIAVAGQTFKWLRDN 314
KNTYGTG F++ NTG S LLTT+ Y + + YALEGSI VAG +WLRD
Sbjct: 263 KNTYGTGAFIVMNTGEEPQLSDNDLLTTIGYGINGK--VYYALEGSIFVAGSAIQWLRDG 320
Query: 315 LNIIADLNEIESLVQKSSSHTDVVFVPAFSGLYAPYWQRDARSIICGLTDETSKVDIVKA 374
L +I + E L K+ +V VPAF+GL APYW +AR + GLT T+K D V+A
Sbjct: 321 LRMIETSPQSEELAAKAKGDNEVYVVPAFTGLGAPYWDSEARGAVFGLTRGTTKEDFVRA 380
Query: 375 ALEAVCFQTRDILEAMKEDCGVALEKLLVDGGMTANKYLMQLQADLTGTPV 425
L+AV +Q++D+++ MK+D G+ + L VDGG N LMQ QAD+ V
Sbjct: 381 TLQAVAYQSKDVIDTMKKDSGIDIPLLKVDGGAAKNDLLMQFQADILDIDV 431
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism,
nucleotide-binding, transferase, struct genomics; HET:
MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A*
Length = 501
Score = 593 bits (1532), Expect = 0.0
Identities = 178/411 (43%), Positives = 250/411 (60%), Gaps = 21/411 (5%)
Query: 22 ELETLTPKEGWVEQDPMVILHLVEECIEKCVGYLVDLDINPNDIVAIGITNQRETTIVWD 81
E + P+ GWVE D I V + + + + D+ + I IGITNQRETT+VWD
Sbjct: 36 EFKQYFPQSGWVEHDANEIWTSVLAVMTEV---INENDVRADQIAGIGITNQRETTVVWD 92
Query: 82 STTGKPLYNAIVWSDVRTKSIVDT-----YASKIKNTTFLTTICGLPISTYFSAVKLNWL 136
TG+P+Y+AIVW +T+SI Y ++ T GL + YF+ K+ W+
Sbjct: 93 KHTGRPIYHAIVWQSRQTQSICSELKQQGYEQTFRDKT------GLLLDPYFAGTKVKWI 146
Query: 137 MDNVDEVKNAIKDNKCLFGTVDSWLIWNLTGGVDGGLHITDVTNASRTLLMNLRTLQWEP 196
+DNV+ + ++ LFGT+D+WL+W L+G HITD +NASRTL+ N+ L+W+
Sbjct: 147 LDNVEGAREKAENGDLLFGTIDTWLVWKLSGK---AAHITDYSNASRTLMFNIHDLEWDD 203
Query: 197 QLLKFFNIPSQILPQIRSSSEIYGCLKDGPLQG--VPISGILGDQQSALVGQSCLQAGQA 254
+LL+ +P +LP++++SSE+YG D G VPI+G+ GDQQ+AL GQ+C + G
Sbjct: 204 ELLELLTVPKNMLPEVKASSEVYGKTIDYHFYGQEVPIAGVAGDQQAALFGQACFERGDV 263
Query: 255 KNTYGTGCFLLYNTGTAIVHSSQGLLTTVAYQFGARAPITYALEGSIAVAGQTFKWLRDN 314
KNTYGTG F+L NTG V S GLLTT+AY + + YALEGSI V+G +WLRD
Sbjct: 264 KNTYGTGGFMLMNTGDKAVKSESGLLTTIAYGIDGK--VNYALEGSIFVSGSAIQWLRDG 321
Query: 315 LNIIADLNEIESLVQKSSSHTDVVFVPAFSGLYAPYWQRDARSIICGLTDETSKVDIVKA 374
L +I + ES + S V VPAF GL PYW +AR I GLT T K ++A
Sbjct: 322 LRMINSAPQSESYATRVDSTEGVYVVPAFVGLGTPYWDSEARGAIFGLTRGTEKEHFIRA 381
Query: 375 ALEAVCFQTRDILEAMKEDCGVALEKLLVDGGMTANKYLMQLQADLTGTPV 425
LE++C+QTRD++EAM +D G+ ++ L VDGG N ++MQ QAD+ T V
Sbjct: 382 TLESLCYQTRDVMEAMSKDSGIDVQSLRVDGGAVKNNFIMQFQADIVNTSV 432
>2p3r_A Glycerol kinase; glycerol metabolism, allosteric regulation,
microfluidics,; 2.00A {Escherichia coli} SCOP: c.55.1.4
c.55.1.4 PDB: 3ezw_A 1gla_G 1bo5_O* 1bot_O 1glb_G*
1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y*
1gll_Y*
Length = 510
Score = 593 bits (1532), Expect = 0.0
Identities = 192/411 (46%), Positives = 255/411 (62%), Gaps = 21/411 (5%)
Query: 22 ELETLTPKEGWVEQDPMVILHLVEECIEKCVGYLVDLDINPNDIVAIGITNQRETTIVWD 81
E E + PK GWVE DPM I + + L DI+ + I AIGITNQRETTIVW+
Sbjct: 33 EFEQIYPKPGWVEHDPMEIWATQSSTLVEV---LAKADISSDQIAAIGITNQRETTIVWE 89
Query: 82 STTGKPLYNAIVWSDVRTKSIVDT-----YASKIKNTTFLTTICGLPISTYFSAVKLNWL 136
TGKP+YNAIVW RT I + I++ T GL I YFS K+ W+
Sbjct: 90 KETGKPIYNAIVWQCRRTAEICEHLKRDGLEDYIRSNT------GLVIDPYFSGTKVKWI 143
Query: 137 MDNVDEVKNAIKDNKCLFGTVDSWLIWNLTGGVDGGLHITDVTNASRTLLMNLRTLQWEP 196
+D+V+ + + + LFGTVD+WLIW +T G +H+TD TNASRT+L N+ TL W+
Sbjct: 144 LDHVEGSRERARRGELLFGTVDTWLIWKMTQG---RVHVTDYTNASRTMLFNIHTLDWDD 200
Query: 197 QLLKFFNIPSQILPQIRSSSEIYGCLKDGPLQG--VPISGILGDQQSALVGQSCLQAGQA 254
++L+ +IP ++LP++R SSE+YG G +PISGI GDQQ+AL GQ C++ G A
Sbjct: 201 KMLEVLDIPREMLPEVRRSSEVYGQTNIDGKGGTRIPISGIAGDQQAALFGQLCVKEGMA 260
Query: 255 KNTYGTGCFLLYNTGTAIVHSSQGLLTTVAYQFGARAPITYALEGSIAVAGQTFKWLRDN 314
KNTYGTGCF+L NTG V S GLLTT+A + YALEG++ +AG + +WLRD
Sbjct: 261 KNTYGTGCFMLMNTGEKAVKSENGLLTTIACGPTGE--VNYALEGAVFMAGASIQWLRDE 318
Query: 315 LNIIADLNEIESLVQKSSSHTDVVFVPAFSGLYAPYWQRDARSIICGLTDETSKVDIVKA 374
+ +I D + E K + V VPAF+GL APYW AR I GLT + I++A
Sbjct: 319 MKLINDAYDSEYFATKVQNTNGVYVVPAFTGLGAPYWDPYARGAIFGLTRGVNANHIIRA 378
Query: 375 ALEAVCFQTRDILEAMKEDCGVALEKLLVDGGMTANKYLMQLQADLTGTPV 425
LE++ +QTRD+LEAM+ D G+ L L VDGG AN +LMQ Q+D+ GT V
Sbjct: 379 TLESIAYQTRDVLEAMQADSGIRLHALRVDGGAVANNFLMQFQSDILGTRV 429
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; 2.80A {Thermus thermophilus}
Length = 495
Score = 587 bits (1515), Expect = 0.0
Identities = 195/426 (45%), Positives = 252/426 (59%), Gaps = 22/426 (5%)
Query: 6 IVFAASTSELLTYHKVELETLTPKEGWVEQDPMVILHLVEECIEKCVGYLVDLDINPNDI 65
I+F + K E L PK GWVE DP+ I + L ++
Sbjct: 17 ILFTLE-GRPVAVAKREFRQLYPKPGWVEHDPLEIWETTLWAAREV---LRRAGAEAGEV 72
Query: 66 VAIGITNQRETTIVWDSTTGKPLYNAIVWSDVRTKSIVDT-----YASKIKNTTFLTTIC 120
+A+GITNQRETT++WD TGKPL+NAIVW D RT + + + T
Sbjct: 73 LALGITNQRETTLLWDRKTGKPLHNAIVWQDRRTTPLCEALRAKGLEPLFRERT------ 126
Query: 121 GLPISTYFSAVKLNWLMDNVDEVKNAIKDNKCLFGTVDSWLIWNLTGGVDGGLHITDVTN 180
GL YFS KL WL++NV +K + FGTVD+WLIWNLTGG +H TD TN
Sbjct: 127 GLLFDPYFSGTKLVWLLENVPGLKARAEGGGVAFGTVDTWLIWNLTGG---KVHATDPTN 183
Query: 181 ASRTLLMNLRTLQWEPQLLKFFNIPSQILPQIRSSSEIYG-CLKDGPLQGVPISGILGDQ 239
ASRTLL NL TL W+P+LL+ IP+ +LP++R S +G L + VPI G+LGDQ
Sbjct: 184 ASRTLLFNLHTLAWDPELLEALGIPAALLPEVRPSDGDFGETLPELLGAPVPIRGVLGDQ 243
Query: 240 QSALVGQSCLQAGQAKNTYGTGCFLLYNTGTAIVHSSQGLLTTVAYQFGARAPITYALEG 299
Q+AL GQ+ L G+ K TYGTG FLL NTG V S +GLL TVA+ G R TYALEG
Sbjct: 244 QAALFGQAALGGGEGKCTYGTGAFLLLNTGKRPVLSEKGLLATVAWSLGGR--ATYALEG 301
Query: 300 SIAVAGQTFKWLRDNLNIIADLNEIESLVQKSSSHTDVVFVPAFSGLYAPYWQRDARSII 359
S+ VAG WL++ + +I + E+E+L DV FVPAF+GL APYW AR +
Sbjct: 302 SLFVAGAAVGWLKE-VGLIRESAEVEALAASVEDTGDVYFVPAFTGLGAPYWDPYARGTL 360
Query: 360 CGLTDETSKVDIVKAALEAVCFQTRDILEAMKEDCGVALEKLLVDGGMTANKYLMQLQAD 419
GLT TS+ + +AALE V FQ RD++ AM+E+ GV L+ L DGGM N+ +++QAD
Sbjct: 361 LGLTRGTSRAHLARAALEGVAFQVRDVVLAMEEEAGVRLKVLKADGGMAQNRLFLKIQAD 420
Query: 420 LTGTPV 425
L G PV
Sbjct: 421 LLGVPV 426
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK
structural genomi research consortium, nysgrc,
transferase; 2.33A {Sinorhizobium meliloti}
Length = 520
Score = 587 bits (1516), Expect = 0.0
Identities = 179/412 (43%), Positives = 234/412 (56%), Gaps = 22/412 (5%)
Query: 22 ELETLTPKEGWVEQDPMVILHLVEECIEKCVGYLVDLDINPNDIVAIGITNQRETTIVWD 81
E + PK GWVE DP I V +++ + I NDI AIGITNQRET +VWD
Sbjct: 56 EFKQHFPKSGWVEHDPEEIWQTVVSTVKEA---IEKSGITANDIAAIGITNQRETVVVWD 112
Query: 82 STTGKPLYNAIVWSDVRTKSIVDT-----YASKIKNTTFLTTICGLPISTYFSAVKLNWL 136
TGKP++NAIVW D RT + D T GL + YFS KLNWL
Sbjct: 113 RETGKPIHNAIVWQDRRTAAFCDKLKKKGLEKTFVKKT------GLLLDPYFSGTKLNWL 166
Query: 137 MDNVDEVKNAIKDNKCLFGTVDSWLIWNLTGGVDGGLHITDVTNASRTLLMNLRTLQWEP 196
+ NV + + FGT+D++LIW LTGG TD TNASRTLL N+ W+
Sbjct: 167 LSNVKGAQVRAAKGELCFGTIDTFLIWRLTGG---ECFCTDATNASRTLLYNIAENAWDD 223
Query: 197 QLLKFFNIPSQILPQIRSSSEIYG-CLKDGPLQGVPISGILGDQQSALVGQSCLQAGQAK 255
+L + +P ++LP+++ + +G +PI G+ GDQQ+A +GQ+C + G K
Sbjct: 224 ELTEVLRVPKEMLPEVKDCAADFGVTDPSLFGAAIPILGVAGDQQAATIGQACFKPGMLK 283
Query: 256 NTYGTGCFLLYNTGTAIVHSSQGLLTTVAYQFGARAPITYALEGSIAVAGQTFKWLRDNL 315
+TYGTGCF L NTG +V S LLTT+AY+ TYALEGSI VAG +WLRD L
Sbjct: 284 STYGTGCFALLNTGKDMVRSKNRLLTTIAYRLDGE--TTYALEGSIFVAGAAVQWLRDGL 341
Query: 316 NIIADLNEIESLVQKSSSHTDVVFVPAFSGLYAPYWQRDARSIICGLTDETSKVDIVKAA 375
+I + SL + + +V VPAF+GL AP+W DAR I G+T T + +AA
Sbjct: 342 KVIKAAPDTGSLAESADPSQEVYLVPAFTGLGAPHWDPDARGAIFGMTRNTGPAEFARAA 401
Query: 376 LEAVCFQTRDILEAMKEDC--GVALEKLLVDGGMTANKYLMQLQADLTGTPV 425
LEAVC+QTRD+LEAM +D L VDGGM A+ + MQ +DL PV
Sbjct: 402 LEAVCYQTRDLLEAMHKDWRRNGNDTVLRVDGGMVASDWTMQRLSDLLDAPV 453
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL
metabolism, nucleotide-binding, transferase; 2.40A
{Thermococcus kodakarensis}
Length = 497
Score = 572 bits (1477), Expect = 0.0
Identities = 185/409 (45%), Positives = 250/409 (61%), Gaps = 25/409 (6%)
Query: 22 ELETLTPKEGWVEQDPMVILHLVEECIEKCVGYLVDLDINPNDIVAIGITNQRETTIVWD 81
E P+ GWVE +P I I+ + I PN I AIG+TNQRETT+VWD
Sbjct: 33 EFPQHYPRPGWVEHNPEEIWDAQLRAIKDA---IQSARIEPNQIAAIGVTNQRETTLVWD 89
Query: 82 STTGKPLYNAIVWSDVRTKSIVDT----YASKIKNTTFLTTICGLPISTYFSAVKLNWLM 137
GKPLYNAIVW RT +V+ Y + IK T GL YFSA KL WL+
Sbjct: 90 KD-GKPLYNAIVWQCRRTAEMVEEIKREYGTMIKEKT------GLVPDAYFSASKLKWLL 142
Query: 138 DNVDEVKNAIKDNKCLFGTVDSWLIWNLTGGVDGGLHITDVTNASRTLLMNLRTLQWEPQ 197
DNV ++ + + +FGTVD++LI+ LTG H+TD +NASRT+L N++ L W+ +
Sbjct: 143 DNVPGLREKAEKGEVMFGTVDTFLIYRLTGE-----HVTDYSNASRTMLFNIKKLDWDDE 197
Query: 198 LLKFFNIPSQILPQIRSSSEIYG-CLKDGPLQGVPISGILGDQQSALVGQSCLQAGQAKN 256
LL+ F+IP +LP++R SSE+YG K+ +P+SG GDQQ+AL GQ+ +AG K
Sbjct: 198 LLELFDIPESVLPEVRESSEVYGYTKKELLGAEIPVSGDAGDQQAALFGQAAFEAGMVKA 257
Query: 257 TYGTGCFLLYNTGTAIVHSSQGLLTTVAYQFGARAPITYALEGSIAVAGQTFKWLRDNLN 316
TYGTG F+L NT ++ S LLTT+A+ R ++YALEGSI V G +WLRD +
Sbjct: 258 TYGTGSFILVNTDKMVL-YSDNLLTTIAWGLNGR--VSYALEGSIFVTGAAVQWLRDGIK 314
Query: 317 IIADLNEIESLVQKSSSHTDVVFVPAFSGLYAPYWQRDARSIICGLTDETSKVDIVKAAL 376
II +E E L K S+ V FVPAF GL APYW + AR II G+T T + + +A L
Sbjct: 315 IIKHASETEELATKLESNEGVYFVPAFVGLGAPYWDQFARGIIIGITRGTGREHLARATL 374
Query: 377 EAVCFQTRDILEAMKEDCGVALEKLLVDGGMTANKYLMQLQADLTGTPV 425
EA+ + TRD+++ M++ V +++L VDGG TAN +LMQ QAD+ V
Sbjct: 375 EAIAYLTRDVVDEMEKL--VQIKELRVDGGATANDFLMQFQADILNRKV 421
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose,
transferase, structural genomics, PSI-2, protein
structure initiative; HET: ATP DXP XUL ADP; 2.00A
{Lactobacillus acidophilus} PDB: 3gbt_A*
Length = 504
Score = 374 bits (963), Expect = e-126
Identities = 92/420 (21%), Positives = 161/420 (38%), Gaps = 32/420 (7%)
Query: 14 ELLTYHKVELETLTPKEGWVEQDPMVILHLVEECIEKCVGYLVDLDINPNDIVAIGITNQ 73
+ + + K G E+DP +I V+E I I AI ++Q
Sbjct: 26 KAVASVSKGYPLIQTKVGQAEEDPKLIFDAVQEIIFDLT------QKIDGKIAAISWSSQ 79
Query: 74 RETTIVWDSTTGKPLYNAIVWSDVRTKSIVDTYASKIKNTTFLTTICGLPISTYFSAVKL 133
+ I S + L N+I W+D KSIV ++ G+P+ KL
Sbjct: 80 MHSLIGLGSD-DELLTNSITWADNCAKSIVQDAKNRGFAQQIYR-KTGMPMHPMAPIYKL 137
Query: 134 NWLMDNVDEVKNAIKDNKCLFGTVDSWLIWNLTGGVDGGLHITDVTNASRTLLMNLRTLQ 193
WL + EV + + + + ++I+ LTG +TD T A+ T ++NL+TL
Sbjct: 138 LWLKNKKTEVFSQAQ----KWIGIKEYIIFRLTGK-----LVTDTTMAAGTGILNLKTLT 188
Query: 194 WEPQLLKFFNIPSQILPQIRSSSEIYGCLKD------GPLQGVPISGILGDQQSALVGQS 247
W+ +LL I + LP+I +++ +K G I D + +G +
Sbjct: 189 WDQELLDILKIKKEQLPKIAQPTKVIFPIKTEYVKKLGIDSDTKIILGASDGYLSTIGVN 248
Query: 248 CLQAGQAKNTYGTGCFLLYNTGTAIVHSSQGLLTTVAYQFGARAPITYALEGSIAVAGQT 307
+ + GT + + S A Y L G + G
Sbjct: 249 AIDSDHCALNVGTSGAIRTIVDQPKIDPSASYFCYPA------DKTHYLLGGPVNNGGIV 302
Query: 308 FKWLRDNLNII-ADLNEIESLVQKSSSHTD-VVFVPAFSGLYAPYWQRDARSIICGLTDE 365
F W R L + + Q + + + ++F+P G AP W +AR GLT
Sbjct: 303 FNWARQTLFDADETPQDFLDVAQTAPAGSRNLIFLPYLGGERAPIWDANARGSFVGLTRM 362
Query: 366 TSKVDIVKAALEAVCFQTRDILEAMKEDCGVALEKLLVDGGMTANKYLMQLQADLTGTPV 425
K ++ +A +E + F D + ++ + GG + ++ QL A++ P+
Sbjct: 363 HQKPEMARAVIEGIIFNLYDAASNLIKN-TKKPVAINATGGFLKSDFVRQLCANIFNVPI 421
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer,
hexokinas actin superfamily, L-rhamnulose kinase,
rhamnose metabolism kinase; HET: LRH ADP; 1.55A
{Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A*
Length = 489
Score = 342 bits (879), Expect = e-114
Identities = 67/406 (16%), Positives = 139/406 (34%), Gaps = 26/406 (6%)
Query: 28 PKEGWVEQDPMVILHLVEECIEKCVGYLVDLDINPNDIVAIGITNQRETTIVWDSTTGKP 87
+ G+V D + + + K I +IGI ++ D G+
Sbjct: 44 SQNGYVTWDVDSLESAIRLGLNKV-------CAAGIAIDSIGIDTWGVDFVLLDQQ-GQR 95
Query: 88 LYNAIVWSDVRTKSIVDTYASKIKNTTFLTTICGLPISTYFSAVKLNWLMDNVDEVKNAI 147
+ + + D RT ++ ++ + G+ + + +L L + E+ I
Sbjct: 96 VGLPVAYRDSRTNGLMAQAQQQLGKRD-IYQRSGIQFLPFNTLYQLRALTEQQPELIPHI 154
Query: 148 KDNKCLFGTVDSWLIWNLTGGVDGGLHITDVTNASRTLLMNLRTLQWEPQLLKFFNIPSQ 207
+ + + LTG + TNA+ T L+N+ + W+ LL +
Sbjct: 155 AH----ALLMPDYFSYRLTGK-----MNWEYTNATTTQLVNINSDDWDESLLAWSGANKA 205
Query: 208 ILPQIRSSSEIYGCLKDGPLQGVP-ISGILGDQQSALVGQSCLQAGQAKNTYGTGCFLLY 266
+ + G +P ++ D SA++ + A + GT + +
Sbjct: 206 WFGRPTHPGNVIGHWICPQGNEIPVVAVASHDTASAVIASPLNGSRAAYLSSGTWSLMGF 265
Query: 267 NTGTAIVHSSQGLLTTVAYQFGARAPITYALEGSIAVAGQTFKWLRDNLNIIADLNEIES 326
+ T + L + + GA Y + +I + L++ I DL + +
Sbjct: 266 ESQTPFT-NDTALAANITNEGGA--EGRYRVLKNIMGLWLLQRVLQERQ--INDLPALIA 320
Query: 327 LVQKSSSHTDVVFV--PAFSGLYAPYWQRDARSIICGLTDETSKVDIVKAALEAVCFQTR 384
Q + ++ F + A S ++ + +++
Sbjct: 321 ATQALPACRFIINPNDDRFINPDEMCSEIQAACREMAQPIPESDAELARCIFDSLALLYA 380
Query: 385 DILEAMKEDCGVALEKLLVDGGMTANKYLMQLQADLTGTPVSSSPI 430
D+L + + G +L + GG N L QL AD G V + P+
Sbjct: 381 DVLHELAQLRGEDFSQLHIVGGGCQNTLLNQLCADACGIRVIAGPV 426
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO
11200H, transferase, PSI-2; 2.30A {Rhodospirillum
rubrum}
Length = 508
Score = 245 bits (627), Expect = 4e-76
Identities = 82/422 (19%), Positives = 146/422 (34%), Gaps = 32/422 (7%)
Query: 14 ELLTYHKVELETLTPKEGWVEQDPMVILHLVEECIEKCVGYLVDLDINPNDIVAIGITNQ 73
++ +P GW E+DP + + + I +T
Sbjct: 29 TVVAVASRPTTLSSPHPGWAEEDPAQWWDNARAVLAELKT---TAGESDWRPGGICVTGM 85
Query: 74 RETTIVWDSTTGKPLYNAIVWSDVRTKSIVDTYASKIKNTTFLTTICGLPISTYFSAVKL 133
++ D G L +I SD R V +++ + FL G ++ KL
Sbjct: 86 LPAVVLLDDR-GAVLRPSIQQSDGRCGDEVAELRAEVDSEAFLA-RTGNGVTQQLVTAKL 143
Query: 134 NWLMDNVDEVKNAIKDNKCLFGTVDSWLIWNLTGGVDGGLHITDVTNASRTLLMNLRTLQ 193
W+ + V AI ++ LTG + D A ++L +
Sbjct: 144 RWIERHEPAVFGAIA----TVCGSYDYINMLLTGE-----RVVDRNWALEGGFIDLASGT 194
Query: 194 WEPQLLKFFNIPSQILPQIRSSSEIYGCLKD------GPLQGVPISGILGDQQSALVGQS 247
E L+ +IP +P + + G + G G+P+ G D ++ +
Sbjct: 195 VEADLVALAHIPPSAVPPAHPTHRVLGAVTAEAAALTGLPTGLPVYGGAADHIASALAAG 254
Query: 248 CLQAGQAKNTYGTGCFLLYNTGTAIVHSSQGLLTTVAYQFGARAPITYALEGSIAVAGQT 307
+ G +G ++ + TA L P YA G +A G
Sbjct: 255 ITRPGDVLLKFGGAGDIIVASATAKSDP--RLYL-----DYHLVPGLYAPNGCMAATGSA 307
Query: 308 FKWLRDNLNI---IADLNEIESLVQKSSSHTD-VVFVPAFSGLYAPYWQRDARSIICGLT 363
WL L A ++++L + + D +V +P F G P A GL+
Sbjct: 308 LNWLAKLLAPEAGEAAHAQLDALAAEVPAGADGLVCLPYFLGEKTPIHDPFASGTFTGLS 367
Query: 364 DETSKVDIVKAALEAVCFQTRDILEAMKEDCGVALEKLLVDGGMTANKYLMQLQADLTGT 423
++ + +A LEAV R + + + G A ++ G T ++ M + AD+
Sbjct: 368 LSHTRGHLWRALLEAVALAFRHHVAVLDD-IGHAPQRFFASDGGTRSRVWMGIMADVLQR 426
Query: 424 PV 425
PV
Sbjct: 427 PV 428
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase;
HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Length = 484
Score = 233 bits (596), Expect = 7e-72
Identities = 85/419 (20%), Positives = 168/419 (40%), Gaps = 33/419 (7%)
Query: 14 ELLTYHKVELETLTPKEGWVEQDPMVILHLVEECIEKCVGYLVDLDINPNDIVAIGITNQ 73
E++ +L P W EQDP + ++ + D+ A+GI Q
Sbjct: 22 EVVAAQTEKLTVSRPHPLWSEQDPEQWWQATDRAMKALGD-----QHSLQDVKALGIAGQ 76
Query: 74 RETTIVWDSTTGKPLYNAIVWSDVRTKSIVDTYASKIKNTTFLTTICGLPISTYFSAVKL 133
+ D+ + L AI+W+D R +++ + +T G + F+A KL
Sbjct: 77 MHGATLLDAQ-QRVLRPAILWNDGRCAQECTLLEARVPQSRVIT---GNLMMPGFTAPKL 132
Query: 134 NWLMDNVDEVKNAIKDNKCLFGTVDSWLIWNLTGGVDGGLHITDVTNASRTLLMNLRTLQ 193
W+ + E+ I +L +TG +D+++A+ T+ +++
Sbjct: 133 LWVQRHEPEIFRQID----KVLLPKDYLRLRMTGE-----FASDMSDAAGTMWLDVAKRD 183
Query: 194 WEPQLLKFFNIPSQILPQIRSSSEIYGCLKD------GPLQGVPISGILGDQQSALVGQS 247
W +L+ ++ +P + SEI G L G + VP+ GD + VG
Sbjct: 184 WSDVMLQACDLSRDQMPALYEGSEITGALLPEVAKAWG-MATVPVVAGGGDNAAGAVGVG 242
Query: 248 CLQAGQAKNTYGTGCFLLYNTGTAIVHSSQGLLTTVAYQFGARAPITYALEGSIAVAGQT 307
+ A QA + GT + + + + F P + L + A
Sbjct: 243 MVDANQAMLSLGTSGVYFAVSEGFLSKPESAVHS-----FCHALPQRWHLMSVMLSAASC 297
Query: 308 FKWLRDNLNIIADLNEIESLVQKSSSHTD-VVFVPAFSGLYAPYWQRDARSIICGLTDET 366
W + +++ + + Q++ + V F+P SG P+ A+ + GLT +
Sbjct: 298 LDWAAKLTGL-SNVPALIAAAQQADESAEPVWFLPYLSGERTPHNNPQAKGVFFGLTHQH 356
Query: 367 SKVDIVKAALEAVCFQTRDILEAMKEDCGVALEKLLVDGGMTANKYLMQLQADLTGTPV 425
++ +A LE V + D ++ + CG+ + + + GG ++Y Q+ AD++G +
Sbjct: 357 GPNELARAVLEGVGYALADGMDVVHA-CGIKPQSVTLIGGGARSEYWRQMLADISGQQL 414
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum,
manolate, transferase, structural genomi 2; HET: ADP
XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A*
Length = 511
Score = 233 bits (597), Expect = 1e-71
Identities = 83/428 (19%), Positives = 151/428 (35%), Gaps = 32/428 (7%)
Query: 14 ELLTYHKVELETLTPKEGWVEQDPMVILHLVEECIEKCVGYLVDLDINPNDIVAIGITNQ 73
L + LET G VEQD V+ ++ + AI ++ Q
Sbjct: 27 GLHFQRSIALETYGDGNGPVEQDAGDWYDAVQRIASS----WWQSGVDARRVSAIVLSGQ 82
Query: 74 RETTIVWDSTTGKPLYNAIVWSDVRTKSIVDTYASKIKNTTFLTTICGLPISTYFSAVKL 133
+ + D +PL+ A+++SD R + ++ + P++ KL
Sbjct: 83 MQNFLPLDQD-HEPLHRAVLYSDKRPLKEAEEINARHGADNLWS-ALENPMTAASILPKL 140
Query: 134 NWLMDNVDEVKNAIKDNKCLFGTVDSWLIWNLTGGVDGGLHITDVTNASRTLLMNLRTLQ 193
+ + + ++ + +++ LTG H TD TNAS T L +
Sbjct: 141 VFWRASFPQAFGRLR---HVVLGAKDYVVLRLTGR-----HATDRTNASTTGLYRPKDDA 192
Query: 194 WEPQLLKFFNIPSQILPQIRSSSEIYGCLKD------GPLQGVPISGILGDQQSALVGQS 247
W +LL + ++P++ E G + G + G P+ LGD +A +G
Sbjct: 193 WHVELLADYGFSLDLMPRLLEPGEQVGGVSALAARQTGFVSGTPVLCGLGDAGAATLGVG 252
Query: 248 CLQAGQAKNTYGTGCFLLYNTGTAIVHSSQGLLTTVAYQFGARAPITYALEGSIAVAGQT 307
L A GT +L T T V ++ + AG
Sbjct: 253 VLDDEDAYLHLGTTGWLARLTQTDPVGDMPVGTI---FRLAGIIAGKTLQVAPVLNAGNI 309
Query: 308 FKWLRDNL-----NIIADLNEIESLVQKSSSHTD-VVFVPAFSGLYAPYWQRDARSIICG 361
+W + A+ + + + + D ++FVP P R + G
Sbjct: 310 LQWALTLVGHRPGEDCAEYFHMAAAEVQGVTVPDGLLFVPYLHAERCPVELPAPRGALLG 369
Query: 362 LTDETSKVDIVKAALEAVCFQTRDILEAMKEDCGVALEKLLVDGGMTANKYLMQLQADLT 421
+T T++ I+ A LE R E + + + L V GG ++ +++ AD
Sbjct: 370 VTGATTRAQILLAVLEGAALSLRWCAELLGME---KVGLLKVVGGGARSEAWLRMIADNL 426
Query: 422 GTPVSSSP 429
+ P
Sbjct: 427 NVSLLVKP 434
>3jvp_A Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, sugar kinase,
crsytal structure, structural genomics, protein
structure initiative; HET: 5RP; 2.31A {Bacillus
halodurans} PDB: 3qdk_A*
Length = 572
Score = 214 bits (548), Expect = 4e-64
Identities = 80/446 (17%), Positives = 153/446 (34%), Gaps = 70/446 (15%)
Query: 24 ETLTPKEGWVEQDPMVILHLVEECIEKCVGYLVDLDINPNDIVAIGITNQRETTIVWDST 83
+ W Q P+ + ++ + + + ++ +D++ IG+ T + D
Sbjct: 49 TNIKLGHEWALQHPLDYVEVLTTSVPAVMK---ESGVDADDVIGIGVDFTACTMLPVDEE 105
Query: 84 TGKPL-----------YNAIVWSDVRTKSIVDTYASKIKNTTF-----LTTICGLPISTY 127
G+PL +W + A+ I G IS+
Sbjct: 106 -GQPLCLLAQYKDNPHSWVKLWKHHAAQD----KANAINEMAEKRGEAFLPRYGGKISSE 160
Query: 128 FSAVKLNWLMDNVDEVKNAIKDNKCLFGTVDSWLIWNLTGGVDGGLHITDVTNASRTLLM 187
+ K+ ++D ++V N F W++ +TG + + A +
Sbjct: 161 WMIAKVWQILDEAEDVYNRT----DQFLEATDWIVSQMTGK-----IVKNSCTAGYKAIW 211
Query: 188 NLRTLQWEPQLLKFFNIP------SQILPQIRSSSEIYGCLKD------GPLQGVPISGI 235
+ R + K + +++ I E G L G G+ ++
Sbjct: 212 HKREGYPSNEFFKALDPRLEHLTTTKLRGDIVPLGERAGGLLPEMAEKMGLNPGIAVAVG 271
Query: 236 LGDQQSALVGQSCLQAGQAKNTYGT-GCFLLYNTGTAIVHSSQGLLTTVAYQFGARAPIT 294
D +A+ G+ GT C +L V G++ P
Sbjct: 272 NVDAHAAVPAVGVTTPGKLVMAMGTSICHMLLGEKEQEVEGMCGVV------EDGIIPGY 325
Query: 295 YALEGSIAVAGQTFKWLRDN--------------LNIIADLNEIESLVQKSSSHTDVVFV 340
E + G F W + +N+ A L E S ++ S ++ +
Sbjct: 326 LGYEAGQSAVGDIFAWFVKHGVSAATFDEAQEKGVNVHALLEEKASQLRPGESG--LLAL 383
Query: 341 PAFSGLYAPYWQRDARSIICGLTDETSKVDIVKAALEAVCFQTRDILEAMKEDCGVALEK 400
++G + + ++ G T +T +I +A LEA F TR I++A GV + +
Sbjct: 384 DWWNGNRSILVDTELSGMLLGYTLQTKPEEIYRALLEATAFGTRAIVDAFHG-RGVEVHE 442
Query: 401 LLVDGGMTA-NKYLMQLQADLTGTPV 425
L GG+ N LMQ+ AD+T +
Sbjct: 443 LYACGGLPQKNHLLMQIFADVTNREI 468
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics,
protein structure initiative; HET: MSE XUL EPE; 1.61A
{Yersinia pseudotuberculosis} PDB: 3gg4_A*
Length = 554
Score = 205 bits (523), Expect = 1e-60
Identities = 89/467 (19%), Positives = 150/467 (32%), Gaps = 78/467 (16%)
Query: 14 ELLTYHKVELETLTPKEGWVEQDPMVILHLVEECIEKCVGYLVDLDINPNDIVAIGITNQ 73
++ E+ PK +VEQ I V + V DINP + +G
Sbjct: 27 RMVGQASREITMFKPKADFVEQSSENIWQAVCNAVRDAVN---QADINPIQVKGLGFDAT 83
Query: 74 RETTIVWDSTTGKPL---------YNAIVWSDVRTKSIVDTYASKIKNTTF-LTTICGLP 123
+ +V D G PL N IVW D R + A +I T + G
Sbjct: 84 C-SLVVLDK-EGNPLTVSPSGRNEQNVIVWMDHRAIT----QAERINATKHPVLEFVGGV 137
Query: 124 ISTYFSAVKLNWLMDNVDEVKNAIKDNKCLFGTVDSWLIWNLTGGVDGGLHITDVTNASR 183
IS KL WL ++ + + + +L W T + +
Sbjct: 138 ISPEMQTPKLLWLKQHMPNTWSNV----GHLFDLPDFLTWRATKD-----ETRSLCSTVC 188
Query: 184 TLLMNLRTLQWEPQLLKFFNIP---SQILPQIRSSSEIYGCLKDGPL-----------QG 229
+W+P K + +I ++ + G L G
Sbjct: 189 KWTYLGHEDRWDPSYFKLVGLADLLDNNAAKIGATVKPMGAPLGHGLSQRAASEMGLIPG 248
Query: 230 VPISGILGDQQSALVGQSCLQAGQAKNTYGTGCFLLYNTGTAIVHSSQ--------GLLT 281
+S + D + +G +N + GT+ H + G+
Sbjct: 249 TAVSVSIIDAHAGTIGILGASGVTGENANFDRR-IALIGGTSTAHMAMSRSAHFISGIWG 307
Query: 282 TVAYQFGARAPITYALEGSIAVAGQTFKWLRDNL---------------NIIADLNEIES 326
+ A P + EG + G + + I LN I
Sbjct: 308 PY---YSAILPEYWLNEGGQSATGALIDHIIQSHPCYPALLEQAKNKGETIYEALNYILR 364
Query: 327 LVQKSSSH-----TDVVFVPAFSGLYAPYWQRDARSIICGLTDETSKVDIVK---AALEA 378
+ + D+ +P F G +P + II GL T+ D+ A ++A
Sbjct: 365 QMAGEPENIAFLTNDIHMLPYFHGNRSPRANPNLTGIITGLKLSTTPEDMALRYLATIQA 424
Query: 379 VCFQTRDILEAMKEDCGVALEKLLVDGGMTANKYLMQLQADLTGTPV 425
+ TR I+E M + G ++ ++ GG T N +Q A+ TG +
Sbjct: 425 LALGTRHIIETMNQ-NGYNIDTMMASGGGTKNPIFVQEHANATGCAM 470
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,,
transferase, structural genomics, PSI-2; 2.00A
{Bifidobacterium adolescentis ATCC15703}
Length = 515
Score = 185 bits (471), Expect = 2e-53
Identities = 72/441 (16%), Positives = 144/441 (32%), Gaps = 67/441 (15%)
Query: 28 PKEGWVEQDPMVILHLVEECIEKCVGYLVDLDINPNDIVAIGITNQRETTIVWDSTTGKP 87
DP +E E+ G +D+ A+ + Q+ ++ D+ G
Sbjct: 36 KHPNGTSVDPSYWWSAFQEAAEQAGG--------LDDVSALAVGGQQHGMVILDNQ-GNV 86
Query: 88 LYNAIVWSDVRT---------------KSIVDTYASKIKNTTFLTTICGLPISTYFSAVK 132
+ +A++W+D + + + G ++ K
Sbjct: 87 IRDAMLWNDTSSAPQAAALIEKLGAAPAQDGEPEDPIARGKQRWVKAVGSSPVASYTLTK 146
Query: 133 LNWLMDNVDEVKNAIKDNKCLFGTVDSWLIWNLTGGVDGGLH--------ITDVTNASRT 184
+ W+ +N E +N K WL W + G TD ++AS T
Sbjct: 147 VAWVAEN--EPENVKKIAAICL--PHDWLSWRIAGYGPVAEGEDAHLEALFTDRSDASGT 202
Query: 185 LLMNLRTLQWEPQLLKFF------------NIPSQILPQIRSSSEIYGCLKD------GP 226
+ + + ++ L+ + + +LP + + D
Sbjct: 203 IYYDAASNEYRRDLIAMVLEAAEGAKAAQSHAEAIVLPTVLGPRDAAPVKADPAIAGKNV 262
Query: 227 LQGVPISGILGDQQSALVGQSCLQAGQAKNTYGTGCFLLYNTGTAIVHSSQGLLTTVAYQ 286
G ++ GD A +G + G + GT + G ++ A
Sbjct: 263 EGGCLLAPGGGDNAMASLG-LGMAVGDVSISLGTSGVAAAISENPTYDL-TGAVSGFAD- 319
Query: 287 FGARAPITYALEGSIAVAGQTFKWLRDNLNIIADLNEIESLVQKSSSHTD-VVFVPAFSG 345
Y + R L D +E+ L S + + VP F G
Sbjct: 320 ----CTGHYLPLACTINGSRILDAGRAALG--VDYDELAKLAFASKPGANGITLVPYFDG 373
Query: 346 LYAPYWQRDARSIICGLT-DETSKVDIVKAALEAVCFQTRDILEAMKEDCGVALEKLLVD 404
P +A + G+T T++ ++ +A +E + RD LE ++ G ++ ++L+
Sbjct: 374 ERTPNR-PNATATFSGMTLANTTRENLARAFVEGLLCSQRDCLELIRS-LGASITRILLI 431
Query: 405 GGMTANKYLMQLQADLTGTPV 425
GG ++ + L + G V
Sbjct: 432 GGGAKSEAIRTLAPSILGMDV 452
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain
12444, SGX, transferase; 2.50A {Novosphingobium
aromaticivorans}
Length = 482
Score = 169 bits (431), Expect = 5e-48
Identities = 50/420 (11%), Positives = 115/420 (27%), Gaps = 54/420 (12%)
Query: 27 TPKEGWVEQDPMVILHLVEECIEKCVGYLVDLDINPNDIVAIGITNQRETTIVWDSTTGK 86
+G D + + + + + + I G+
Sbjct: 40 LEIDGIRRLDAPDTGRWLLDVLSRYADH---------PVTTIVPVGHGAGIAALTD--GR 88
Query: 87 PLYNAIVWSDVRTKSIVDTYASKIKNTTFLTTICGLPISTYFSAVKLNWLMDNVDEVKNA 146
+ + + ++++ Y S+ F T +L WL +V
Sbjct: 89 LAFPPLDYEQSIPEAVMADYRSQRD--PFARTGSPALPDGLNIGSQLWWLDQLHPDVMAN 146
Query: 147 IKDNKCLFGTVDSWLIWNLTGGVDGGLHITDVTNAS-RTLLMNLRTLQWEPQLLKFFNIP 205
+ W LTG +++VT+ + L + + + P + K
Sbjct: 147 AT-----LLPWAQYWAWFLTG-----RAVSEVTSLGCHSDLWDPQDGDFSP-MAKRLGWA 195
Query: 206 SQILPQIRSSSEIYGCLKD------GPLQGVPISGILGDQQSALVGQSCLQAGQAKN--- 256
++ I + + G L G V + L D +AL+
Sbjct: 196 AR-FAPIVRAGDTVGALLPAIAERTGLSPDVQVLAGLHDSNAALLAARGFAEIADNEATV 254
Query: 257 -TYGTGCFLLYNTGTAIVHSSQGLLTTVAYQFGARAPITYALEGSIAVAGQTFKWLRDNL 315
+ GT + T + ++ + + + G+ + L +
Sbjct: 255 LSTGTWFIAMRLPATPVDTATLPEARDCLVNVDVHG---RPVPSARFMGGREIETLIEID 311
Query: 316 ----NIIADLNEIESLVQKSSSHTDVVFVPAFSGLYAPYWQRDARSIICGLTDETSKVDI 371
+I D + + V + H + +P + PY + +
Sbjct: 312 TRRVDIKPDQPALLAAVPEVLRH-GRMILPTLMRGFGPYPHGRFA----WINRPEDWFER 366
Query: 372 VKAALEAVCFQTRDILEAMKEDCGVALEKLLVDGGMTANKYLMQLQAD-LTGTPVSSSPI 430
AA L+ + + ++LV+G ++ A V ++
Sbjct: 367 RAAACLYAALVADTALDLIG-----STGRILVEGRFAEADVFVRALASLRPDCAVYTANA 421
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 47.2 bits (111), Expect = 1e-05
Identities = 64/437 (14%), Positives = 121/437 (27%), Gaps = 129/437 (29%)
Query: 18 YHKVELETLTPKEGWVEQDPMVILHLVEECIEKCVGYLVDLDINPNDIVAIGITNQRETT 77
+H ++ ET + + +D IL + E+ + D D+
Sbjct: 4 HHHMDFETGEHQYQY--KD---ILSVFEDAFVD------NFDCK--DVQ----------- 39
Query: 78 IVWDSTTGKPLYNAIVWSDVRTKSIVDTYASKIKNTTFL-TTICGLPISTYFSAVK---- 132
D + S I+ + + T L T+ V+
Sbjct: 40 ---DMPKS-------ILSKEEIDHIIMS-KDAVSGTLRLFWTLLSKQEEMVQKFVEEVLR 88
Query: 133 --LNWLMDNVDEVKNAIKDNKCLFGTVDSWLIWNLTGGVDGGLHITDVTNASRTLLMNLR 190
+LM + + ++ R L N
Sbjct: 89 INYKFLMSPIKTEQRQPSMMTRMY-------------------------IEQRDRLYN-- 121
Query: 191 TLQWEPQLLKFFNIPS-QILPQIRSSSEIYGCLKDGPLQGVPISGILGDQQSALVGQSCL 249
+ Q+ +N+ Q ++R L+ P + V I G+LG ++ + CL
Sbjct: 122 ----DNQVFAKYNVSRLQPYLKLRQ-----ALLELRPAKNVLIDGVLGSGKTWVALDVCL 172
Query: 250 QAGQAKNTYGTGCFLL----YNTGTAIVHSSQGLLTTVAYQFGARAPITYALEGSIAVAG 305
+ F L N+ ++ Q LL + + +R+ + ++
Sbjct: 173 SYKV-QCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIK------- 224
Query: 306 QTFKWLRDNL-NIIADLNEIESL-----VQKSSSHTDVVFVPAFSGLYAPYWQRDARSII 359
++ L ++ L VQ ++ + AF + I
Sbjct: 225 LRIHSIQAELRRLLKSKPYENCLLVLLNVQ-NAKAWN-----AF----------NLSCKI 268
Query: 360 CGLTDETSKVDIVKAALEAVCFQTRDILEAMKEDCGVALEKLLVDGGMTANKYLMQLQAD 419
T D + AA + D ++ LL+ KYL D
Sbjct: 269 LLTTRFKQVTDFLSAATTTH-ISLDHHSMTLTPD---EVKSLLL-------KYLDCRPQD 317
Query: 420 L-----TGTPVSSSPIG 431
L T P S I
Sbjct: 318 LPREVLTTNPRRLSIIA 334
Score = 41.4 bits (96), Expect = 6e-04
Identities = 37/248 (14%), Positives = 71/248 (28%), Gaps = 54/248 (21%)
Query: 11 STSELLTYHKVELETLTPKEGWVEQDPMVILHLVEECIEKCVGYLVDLDINPN-DIVAIG 69
+L+ K E++ + + + + E+ V V+ + N +
Sbjct: 41 MPKSILS--KEEIDHII-MSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSP 97
Query: 70 I---TNQRETTIVWDSTTGKPLYNAI-------VWSDVRTKSIVD--TYASKIKNTTFLT 117
I Q LYN V R + + +++ +
Sbjct: 98 IKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVS---RLQPYLKLRQALLELRPAKNVL 154
Query: 118 TICG--------LPISTYFS-AVKLN------WL-MDNVDEVKNAIKDNKCLFGTVDSWL 161
I G + + S V+ WL + N + + ++ + L +D
Sbjct: 155 -IDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDP-- 211
Query: 162 IWNLTGGVDGG----LHITDVTNASRTLLMN---------LRTLQWEPQLLKFFNIPSQI 208
N T D L I + R LL + L + + FN+ +I
Sbjct: 212 --NWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNV-QNAKAWNAFNLSCKI 268
Query: 209 LPQIRSSS 216
L R
Sbjct: 269 LLTTRFKQ 276
Score = 37.1 bits (85), Expect = 0.012
Identities = 62/491 (12%), Positives = 136/491 (27%), Gaps = 163/491 (33%)
Query: 3 KSTIVFAASTSELLTYHKVELETLTPKEG-WV----EQDPMVILHLVEE-CIEKCVGYLV 56
K+ + S +++ + W+ P +L ++++ + +
Sbjct: 163 KTWVALDVCLSY-------KVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTS 215
Query: 57 DLDINPNDIVAIGITNQRETTIVWDSTTGKPLYNA-IVWSDVRTKSIVDTYA--SKIKNT 113
D + N + I ++ KP N +V +V+ + + KI T
Sbjct: 216 RSDHSSNIKLRIHSIQAELRRLLKS----KPYENCLLVLLNVQNAKAWNAFNLSCKILLT 271
Query: 114 T---FLTTICGLPISTYFSAVK--------------LNWLMDNVDEVKNAIKDNK----C 152
T +T +T+ S L +L ++ +
Sbjct: 272 TRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLS 331
Query: 153 LFGT-----VDSWLIWNLTGGVDGGLHITDVTNASRTLLMNLRTLQWEPQLLK--F---- 201
+ + +W W H+ + + + +L L EP + F
Sbjct: 332 IIAESIRDGLATWDNW---------KHV-NCDKLTTIIESSLNVL--EPAEYRKMFDRLS 379
Query: 202 -F----NIPSQILPQIRSSSEIYGCLKDGPLQGVPISGILGDQQSALVGQSCLQAGQAKN 256
F +IP+ +L + D V + ++ + L S ++ ++
Sbjct: 380 VFPPSAHIPTILL-------SLIWF--DVIKSDVMV--VV----NKLHKYSLVEKQPKES 424
Query: 257 TYGT-GCFLLY---NTGTAIVHSSQGLLT----TVAYQFGARAP----------ITYALE 298
T +L +H S ++ + P I + L+
Sbjct: 425 TISIPSIYLELKVKLENEYALHRS--IVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLK 482
Query: 299 GSIAVAGQT------------FKWLR--------------DNLNIIADLNEIESLVQKSS 332
F++L LN + L + + +
Sbjct: 483 N----IEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYICDND 538
Query: 333 SHTDVVFVPAFSGL---YAPYWQRDARSIICGLTDETSKVDIVKAALEAVCFQTRDILEA 389
P + L + + ++IC + T D+++ AL
Sbjct: 539 --------PKYERLVNAILDFLPKIEENLIC--SKYT---DLLRIAL------------- 572
Query: 390 MKEDCGVALEK 400
M ED + E
Sbjct: 573 MAEDEAIFEEA 583
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold,
metal binding protein; HET: ADP; 3.00A {Acidaminococcus
fermentans} SCOP: c.55.1.5
Length = 270
Score = 37.5 bits (87), Expect = 0.005
Identities = 13/74 (17%), Positives = 31/74 (41%), Gaps = 5/74 (6%)
Query: 357 SIICGLTDETSKVDIVKAALEAVCFQTRDILEAMKEDCGVALEKLLVDGGMTANKYLMQL 416
+I L+ T K+DI+ +V + + + + +++ GG+ N +
Sbjct: 173 EVISQLSKGTDKIDIIAGIHRSVASRVIGLANRVGIV-----KDVVMTGGVAQNYGVRGA 227
Query: 417 QADLTGTPVSSSPI 430
+ G + +SP+
Sbjct: 228 LEEGLGVEIKTSPL 241
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 32.3 bits (73), Expect = 0.33
Identities = 27/136 (19%), Positives = 47/136 (34%), Gaps = 53/136 (38%)
Query: 54 YLVD-LDINPNDIVAIGITNQRETTIVWDSTT-GKPLYNAIVWSDVR------TKSIVDT 105
LV D+ D+V ++ +++ P+Y+ SD+R ++ IVD
Sbjct: 431 LLVPASDLINKDLVKNNVS--------FNAKDIQIPVYDTFDGSDLRVLSGSISERIVD- 481
Query: 106 YASKIKNTTFLTTICGLPI----STYFSAVKLNWLMDNVDEVKNAIKDNKCLFGTVDSWL 161
I LP+ +T F A ++D FG +
Sbjct: 482 ------------CIIRLPVKWETTTQFKA---THILD---------------FGPGGASG 511
Query: 162 IWNLTGG-VDG-GLHI 175
+ LT DG G+ +
Sbjct: 512 LGVLTHRNKDGTGVRV 527
>1u7l_A Vacuolar ATP synthase subunit C; hydrolase, structural protein;
HET: TLA; 1.75A {Saccharomyces cerevisiae} SCOP:
e.57.1.1
Length = 392
Score = 31.9 bits (72), Expect = 0.41
Identities = 15/59 (25%), Positives = 25/59 (42%), Gaps = 4/59 (6%)
Query: 361 GLTDETSKVDIVKAALEAVCFQTRDILEAMKEDCGVALEKLLVDGGMTANKYLMQLQAD 419
++E SKVD + A + +IL+ + E A L ++ M +YL Q
Sbjct: 63 VESEELSKVD---NQIGASIGKIIEILQGLNETSTNAYRTLPIN-NMPVPEYLENFQWQ 117
>3k1f_M Transcription initiation factor IIB; RNA polymerase II, TFIIB,
transcription factor, DNA-binding, DNA-directed RNA
polymerase; 4.30A {Saccharomyces cerevisiae}
Length = 197
Score = 30.8 bits (69), Expect = 0.68
Identities = 9/47 (19%), Positives = 13/47 (27%), Gaps = 13/47 (27%)
Query: 360 CGLTDETSKVDIVKAALEAVCFQTRDILEAMKEDCGVALEKLLVDGG 406
C + + + VC CG+ L LVD
Sbjct: 27 CKVYPPKIVERFSEG--DVVC-----------ALCGLVLSDKLVDTR 60
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold,
ATPase, electron transfer, ATP/ADP binding; HET: ANP;
1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A
Length = 276
Score = 30.6 bits (69), Expect = 0.88
Identities = 19/133 (14%), Positives = 49/133 (36%), Gaps = 16/133 (12%)
Query: 298 EGSIAVAGQTFKWLRDNLNIIADLNEIESLVQKSSSHTDVVFVPAFSGLYAPYWQRDARS 357
+ A G+ + + + D++E+ S+ S + S + + +
Sbjct: 123 DKCAAGTGRFLDVMAKIIEV--DVSELGSISMNSQNEVS------ISSTCTVFAESE--- 171
Query: 358 IICGLTDETSKVDIVKAALEAVCFQTRDILEAMKEDCGVALEKLLVDGGMTANKYLMQLQ 417
+I L++ DIV +V + +++ + +++ GG+ N +++
Sbjct: 172 VISHLSENAKIEDIVAGIHTSVAKRVSSLVKRIGVQ-----RNVVMVGGVARNSGIVRAM 226
Query: 418 ADLTGTPVSSSPI 430
A T + I
Sbjct: 227 AREINTEIIVPDI 239
>1sxj_A Activator 1 95 kDa subunit; clamp loader, processivity clamp, DNA
sliding clamp, AAA+ at polymerase, DNA-binding protein;
HET: AGS ADP; 2.85A {Saccharomyces cerevisiae} SCOP:
a.80.1.1 c.37.1.20
Length = 516
Score = 30.2 bits (68), Expect = 1.5
Identities = 14/57 (24%), Positives = 24/57 (42%), Gaps = 10/57 (17%)
Query: 89 YNAIVWSDVRTKSIVDTYASKIKNTTFLTTICGLPISTYFSAVKLNW----LMDNVD 141
NA SDVR+K++++ +KN ++ G + +MD VD
Sbjct: 108 QNA---SDVRSKTLLNA---GVKNALDNMSVVGYFKHNEEAQNLNGKHFVIIMDEVD 158
>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural
genomics, structural genomics CON SGC; 2.40A {Homo
sapiens} SCOP: c.2.1.2
Length = 270
Score = 29.4 bits (67), Expect = 1.9
Identities = 7/28 (25%), Positives = 9/28 (32%)
Query: 401 LLVDGGMTANKYLMQLQADLTGTPVSSS 428
LLV GG ++ P S
Sbjct: 243 LLVTGGAELGYGCKASRSTPVDAPDIPS 270
>3p0l_A Steroidogenic acute regulatory protein, mitochond; structural
genomics consortium, SGC, start domain, cholester
transport, cholesterol; 3.40A {Homo sapiens}
Length = 221
Score = 29.3 bits (65), Expect = 2.1
Identities = 24/133 (18%), Positives = 47/133 (35%), Gaps = 8/133 (6%)
Query: 295 YALEGSI-AVAGQTFKWLRDNLNIIA----DLNEIESLVQKSSSHTDVVFVPAFSGLYAP 349
+ LE + + ++ L + + + ++ EI+ ++QK T + A
Sbjct: 57 FRLEVVVDQPMERLYEELVERMEAMGEWNPNVKEIK-VLQKIGKDTFITHELAAEAAGNL 115
Query: 350 YWQRDARSIICGLTDETSKVDIVKAALEAVCFQTRDILEAMKEDCGVALEKLLVDGGMTA 409
RD S+ C ++ V A + + ++ A + L L G +
Sbjct: 116 VGPRDFVSVRCAKRRGSTCVLAGMATDFGNMPEQKGVIRAEHGPTCMVLHPL--AGSPSK 173
Query: 410 NKYLMQLQADLTG 422
K L DL G
Sbjct: 174 TKLTWLLSIDLKG 186
>3qbx_A Anhydro-N-acetylmuramic acid kinase; acetate and sugar kinases,
HSP70, actin superfamily, anhydro-N-actetylmuramic acid
binding; HET: AH0; 2.10A {Pseudomonas aeruginosa} PDB:
3qbw_A*
Length = 371
Score = 29.1 bits (66), Expect = 2.8
Identities = 14/44 (31%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Query: 386 ILEAMKEDCGVALEKLLVDGGMTANKYLMQ-LQADLTGTPVSSS 428
I E++ D E++LV GG N LM+ L + V+S+
Sbjct: 273 ISESLL-DAQPDCEEVLVCGGGAFNTALMKRLAMLMPEARVAST 315
>2cs4_A Protein C12ORF2; GTP binding, ubiquitin fold, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: d.15.1.5
Length = 95
Score = 27.2 bits (60), Expect = 3.1
Identities = 9/32 (28%), Positives = 18/32 (56%)
Query: 349 PYWQRDARSIICGLTDETSKVDIVKAALEAVC 380
W + I+CG+T+ T+ ++V A +A+
Sbjct: 11 KVWVDGVQRIVCGVTEVTTCQEVVIALAQAIG 42
>3cqy_A Anhydro-N-acetylmuramic acid kinase; APC7501, SO_1313, structural
genomics, PSI-2, shewanella one MR-1, protein structure
initiative; 2.30A {Shewanella oneidensis}
Length = 370
Score = 28.7 bits (65), Expect = 3.6
Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Query: 399 EKLLVDGGMTANKYLMQ-LQADLTGTPVSSS 428
+L V GG N LMQ L A L G + ++
Sbjct: 291 GELFVCGGGAFNAELMQRLAALLPGYRIDTT 321
>1qgu_B Protein (nitrogenase molybdenum iron protein); biological nitrogen
fixation, nitrogen metabolism, molybdoenzymes, electron
transfer; HET: HCA CFM CLF; 1.60A {Klebsiella
pneumoniae} SCOP: c.92.2.3 PDB: 1h1l_B* 1qh1_B* 1qh8_B*
Length = 519
Score = 28.6 bits (64), Expect = 4.3
Identities = 18/138 (13%), Positives = 42/138 (30%), Gaps = 20/138 (14%)
Query: 301 IAVAGQTFKWLRDNLNII-------ADLNEIESLVQKSSSHTDVVFVPAFSGLYAPYWQR 353
Q LN++ + ++ ++ + S +
Sbjct: 206 FTADYQGQPGKLPKLNLVTGFETYLGNFRVLKRMM--EQMAVPCSLLSDPSEVLDTPADG 263
Query: 354 DARSIICGLTDETSKVDIVKAALEA-----VC-FQTRDILEAMKEDCGVALEKLLVDGGM 407
R G T +K A +A + +Q + ++E ++ + G+
Sbjct: 264 HYRMYSGGTT-----QQEMKEAPDAIDTLLLQPWQLLKSKKVVQEMWNQPATEVAIPLGL 318
Query: 408 TANKYLMQLQADLTGTPV 425
A L+ + L+G P+
Sbjct: 319 AATDELLMTVSQLSGKPI 336
>1mio_B Nitrogenase molybdenum iron protein (beta chain); HET: HCA CFM CLP;
3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Length = 458
Score = 28.1 bits (63), Expect = 6.4
Identities = 22/123 (17%), Positives = 47/123 (38%), Gaps = 18/123 (14%)
Query: 315 LNII------ADLNEIESLVQKSSSHTDVVFVPAFSGLYAPYWQRDARSIICGLTDETSK 368
+N+I AD+ EI+ L + + P SG+ + + G T K
Sbjct: 172 INVIPGFVGPADMREIKRLFEAM--DIPYIMFPDTSGVLDGPTTGEYKMYPEGGT----K 225
Query: 369 VDIVKAALEA---VCFQ---TRDILEAMKEDCGVALEKLLVDGGMTANKYLMQLQADLTG 422
++ +K + + + + +++ C V + L G++A + ++ TG
Sbjct: 226 IEDLKDTGNSDLTLSLGSYASDLGAKTLEKKCKVPFKTLRTPIGVSATDEFIMALSEATG 285
Query: 423 TPV 425
V
Sbjct: 286 KEV 288
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0613 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 6,399,862
Number of extensions: 385498
Number of successful extensions: 1275
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1158
Number of HSP's successfully gapped: 38
Length of query: 431
Length of database: 6,701,793
Length adjustment: 96
Effective length of query: 335
Effective length of database: 4,021,377
Effective search space: 1347161295
Effective search space used: 1347161295
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (26.8 bits)