Query psy15864
Match_columns 553
No_of_seqs 750 out of 3676
Neff 10.1
Searched_HMMs 46136
Date Fri Aug 16 23:18:18 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy15864.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/15864hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0569|consensus 100.0 4.5E-34 9.7E-39 286.1 23.3 341 89-438 121-472 (485)
2 KOG0254|consensus 100.0 5.7E-29 1.2E-33 261.4 27.2 350 85-440 143-503 (513)
3 TIGR00887 2A0109 phosphate:H+ 100.0 9.7E-29 2.1E-33 259.6 20.4 327 87-432 118-500 (502)
4 TIGR01299 synapt_SV2 synaptic 100.0 1.1E-28 2.4E-33 263.3 20.9 328 88-428 259-741 (742)
5 PRK10077 xylE D-xylose transpo 100.0 1.4E-26 3E-31 242.7 26.2 329 89-437 125-474 (479)
6 PF00083 Sugar_tr: Sugar (and 100.0 9.7E-32 2.1E-36 279.4 -13.1 341 83-435 101-451 (451)
7 KOG0253|consensus 99.9 2.8E-26 6.1E-31 213.8 21.9 317 94-428 178-527 (528)
8 PRK10642 proline/glycine betai 99.9 2.2E-25 4.8E-30 233.4 21.1 297 89-426 123-435 (490)
9 TIGR00879 SP MFS transporter, 99.9 2.2E-24 4.7E-29 225.8 26.2 336 87-429 130-479 (481)
10 TIGR00898 2A0119 cation transp 99.9 5.5E-25 1.2E-29 232.0 20.4 314 91-429 187-503 (505)
11 COG2271 UhpC Sugar phosphate p 99.9 9E-23 1.9E-27 195.9 11.2 285 103-420 138-434 (448)
12 KOG0252|consensus 99.9 5.8E-23 1.3E-27 197.9 9.6 322 89-433 149-510 (538)
13 PRK09952 shikimate transporter 99.9 3.6E-21 7.9E-26 198.6 18.9 289 89-424 130-436 (438)
14 KOG0255|consensus 99.9 2.7E-20 5.8E-25 196.9 22.3 319 91-430 178-502 (521)
15 TIGR00903 2A0129 major facilit 99.9 1.1E-20 2.4E-25 189.6 18.1 269 88-416 83-361 (368)
16 PRK10406 alpha-ketoglutarate t 99.9 1.5E-20 3.2E-25 194.0 19.6 284 89-427 129-429 (432)
17 PRK15075 citrate-proton sympor 99.8 1.1E-19 2.4E-24 187.7 18.9 259 89-398 122-397 (434)
18 PRK11551 putative 3-hydroxyphe 99.8 4.8E-20 1E-24 188.9 16.1 273 89-413 108-388 (406)
19 COG2814 AraJ Arabinose efflux 99.8 2.2E-19 4.8E-24 175.2 18.4 267 90-416 107-382 (394)
20 PRK10489 enterobactin exporter 99.8 1.8E-19 3.8E-24 185.3 17.1 287 90-431 116-410 (417)
21 PRK09556 uhpT sugar phosphate 99.8 1.5E-19 3.2E-24 188.5 15.5 295 87-415 125-444 (467)
22 PRK12307 putative sialic acid 99.8 3.7E-19 7.9E-24 183.6 18.3 292 89-422 111-411 (426)
23 PRK11663 regulatory protein Uh 99.8 1.7E-19 3.6E-24 186.2 15.6 299 91-425 118-429 (434)
24 TIGR02332 HpaX 4-hydroxyphenyl 99.8 7.8E-19 1.7E-23 179.8 17.6 279 89-400 101-400 (412)
25 KOG0569|consensus 99.8 6.5E-20 1.4E-24 184.4 8.9 166 274-446 64-237 (485)
26 TIGR00891 2A0112 putative sial 99.8 1.3E-18 2.9E-23 178.0 18.4 278 89-398 105-393 (405)
27 PRK03545 putative arabinose tr 99.8 2.9E-18 6.2E-23 174.7 18.4 269 90-420 103-380 (390)
28 TIGR00883 2A0106 metabolite-pr 99.8 2.5E-18 5.4E-23 175.2 16.6 267 89-405 101-385 (394)
29 PRK11273 glpT sn-glycerol-3-ph 99.8 4.6E-18 9.9E-23 176.5 18.6 293 89-417 125-432 (452)
30 PRK05122 major facilitator sup 99.8 3.8E-18 8.2E-23 174.5 17.6 269 89-423 117-391 (399)
31 PRK12382 putative transporter; 99.8 9.6E-18 2.1E-22 171.0 20.4 266 89-419 117-388 (392)
32 TIGR00893 2A0114 d-galactonate 99.8 4.4E-18 9.6E-23 173.3 17.2 297 89-415 87-394 (399)
33 TIGR00712 glpT glycerol-3-phos 99.8 5E-18 1.1E-22 175.5 16.8 304 89-424 123-437 (438)
34 PRK03893 putative sialic acid 99.8 2E-18 4.4E-23 181.7 13.6 312 88-409 112-442 (496)
35 TIGR00890 2A0111 Oxalate/Forma 99.8 9.7E-18 2.1E-22 169.7 17.2 269 90-411 97-373 (377)
36 PRK09705 cynX putative cyanate 99.8 1.7E-17 3.7E-22 168.9 18.4 276 89-427 102-388 (393)
37 TIGR00895 2A0115 benzoate tran 99.8 1.2E-17 2.5E-22 170.6 15.7 280 89-392 110-397 (398)
38 PRK09874 drug efflux system pr 99.8 2.3E-17 4.9E-22 169.2 17.3 274 89-418 112-396 (408)
39 TIGR00894 2A0114euk Na(+)-depe 99.8 3.7E-17 8.1E-22 170.5 19.1 295 89-416 136-446 (465)
40 cd06174 MFS The Major Facilita 99.7 5.4E-17 1.2E-21 162.5 18.2 249 89-417 92-349 (352)
41 PRK11010 ampG muropeptide tran 99.7 1E-16 2.2E-21 167.4 18.7 271 102-423 127-405 (491)
42 TIGR00900 2A0121 H+ Antiporter 99.7 7.3E-17 1.6E-21 162.6 15.8 257 89-396 97-364 (365)
43 PRK10213 nepI ribonucleoside t 99.7 2E-16 4.3E-21 161.0 18.6 262 90-413 114-384 (394)
44 PRK15011 sugar efflux transpor 99.7 1.2E-16 2.6E-21 162.9 16.9 259 102-422 125-392 (393)
45 PRK03699 putative transporter; 99.7 1E-16 2.2E-21 163.5 16.1 267 89-415 100-375 (394)
46 PRK10091 MFS transport protein 99.7 2.2E-16 4.7E-21 160.3 18.0 264 90-414 97-370 (382)
47 TIGR00897 2A0118 polyol permea 99.7 4.9E-16 1.1E-20 158.9 20.4 278 89-416 110-397 (402)
48 KOG2532|consensus 99.7 4.3E-17 9.2E-22 166.2 12.3 291 90-419 134-446 (466)
49 PLN00028 nitrate transmembrane 99.7 1E-16 2.2E-21 167.1 15.2 280 89-416 129-429 (476)
50 KOG2533|consensus 99.7 3.2E-17 7E-22 167.3 9.8 274 91-402 141-438 (495)
51 TIGR00899 2A0120 sugar efflux 99.7 4.7E-16 1E-20 157.5 17.7 266 91-416 94-370 (375)
52 PRK06814 acylglycerophosphoeth 99.7 4.7E-16 1E-20 179.8 19.2 263 90-394 114-395 (1140)
53 PRK14995 methyl viologen resis 99.7 4.5E-16 9.8E-21 163.3 17.3 293 89-395 99-413 (495)
54 TIGR00892 2A0113 monocarboxyla 99.7 4.4E-17 9.4E-22 169.0 9.1 286 91-412 115-413 (455)
55 PRK10504 putative transporter; 99.7 7E-16 1.5E-20 161.3 17.9 295 89-398 103-418 (471)
56 COG2223 NarK Nitrate/nitrite t 99.7 5.3E-16 1.2E-20 149.8 15.1 277 90-418 111-399 (417)
57 PRK15402 multidrug efflux syst 99.7 1.3E-15 2.9E-20 156.0 18.9 265 89-404 106-379 (406)
58 PRK15034 nitrate/nitrite trans 99.7 4.7E-16 1E-20 157.5 15.2 277 87-420 131-454 (462)
59 KOG0254|consensus 99.7 2.9E-16 6.3E-21 165.3 14.0 156 273-439 92-254 (513)
60 TIGR00881 2A0104 phosphoglycer 99.7 2.4E-16 5.3E-21 159.6 12.9 279 90-400 89-377 (379)
61 TIGR00710 efflux_Bcr_CflA drug 99.7 1.3E-15 2.9E-20 154.7 18.2 252 89-392 98-358 (385)
62 PRK09528 lacY galactoside perm 99.7 5.2E-16 1.1E-20 159.7 15.0 263 114-422 137-405 (420)
63 TIGR00711 efflux_EmrB drug res 99.7 1.3E-15 2.8E-20 160.0 17.2 293 88-395 94-410 (485)
64 PRK11195 lysophospholipid tran 99.7 2.1E-15 4.6E-20 153.4 18.1 276 89-415 93-375 (393)
65 PRK08633 2-acyl-glycerophospho 99.7 1.1E-15 2.3E-20 177.5 17.9 256 89-393 108-382 (1146)
66 PF00083 Sugar_tr: Sugar (and 99.7 2.2E-18 4.9E-23 179.1 -4.2 155 273-438 49-215 (451)
67 PRK11902 ampG muropeptide tran 99.7 4.1E-15 8.8E-20 152.1 19.1 262 102-416 114-386 (402)
68 TIGR00902 2A0127 phenyl propri 99.6 7.1E-15 1.5E-19 149.2 18.9 263 91-413 101-372 (382)
69 PRK11646 multidrug resistance 99.6 3.1E-15 6.7E-20 152.6 15.4 249 89-396 104-360 (400)
70 PF07690 MFS_1: Major Facilita 99.6 2.6E-16 5.7E-21 157.7 6.9 252 90-386 91-352 (352)
71 TIGR00901 2A0125 AmpG-related 99.6 6.1E-15 1.3E-19 148.3 14.8 234 103-378 104-354 (356)
72 PRK11102 bicyclomycin/multidru 99.6 1.1E-14 2.4E-19 147.6 16.7 247 89-386 84-340 (377)
73 TIGR00889 2A0110 nucleoside tr 99.6 1.9E-14 4E-19 147.5 17.7 165 256-426 228-408 (418)
74 PRK10473 multidrug efflux syst 99.6 1.3E-14 2.7E-19 148.1 16.2 250 89-400 96-354 (392)
75 TIGR01299 synapt_SV2 synaptic 99.6 9.1E-15 2E-19 156.9 15.4 191 238-438 169-378 (742)
76 TIGR00792 gph sugar (Glycoside 99.6 7E-15 1.5E-19 152.3 14.0 241 105-398 122-383 (437)
77 PRK11128 putative 3-phenylprop 99.6 4E-14 8.6E-19 143.8 18.5 262 90-410 100-369 (382)
78 KOG1330|consensus 99.6 1.1E-15 2.3E-20 148.9 6.3 268 90-396 127-413 (493)
79 TIGR00896 CynX cyanate transpo 99.6 1.9E-14 4.1E-19 144.7 15.2 249 90-399 93-352 (355)
80 PRK11043 putative transporter; 99.6 4.9E-14 1.1E-18 144.2 18.2 251 90-395 100-357 (401)
81 PRK03633 putative MFS family t 99.6 3.6E-14 7.9E-19 144.0 17.0 261 89-414 99-366 (381)
82 PRK10054 putative transporter; 99.6 1.3E-14 2.8E-19 147.7 13.1 263 101-418 115-382 (395)
83 TIGR01272 gluP glucose/galacto 99.6 8E-14 1.7E-18 136.5 17.5 253 92-403 18-298 (310)
84 TIGR00882 2A0105 oligosacchari 99.6 9.6E-14 2.1E-18 141.7 18.7 264 101-416 118-391 (396)
85 PRK15403 multidrug efflux syst 99.6 1.5E-13 3.3E-18 140.7 19.4 270 89-410 109-387 (413)
86 TIGR02718 sider_RhtX_FptX side 99.6 1.5E-13 3.2E-18 140.1 19.1 257 106-413 121-384 (390)
87 COG2807 CynX Cyanate permease 99.5 2.7E-13 5.8E-18 128.4 15.9 257 92-409 107-373 (395)
88 PRK10077 xylE D-xylose transpo 99.5 1.2E-13 2.5E-18 144.9 15.2 151 272-424 57-218 (479)
89 PRK10133 L-fucose transporter; 99.5 2.2E-13 4.8E-18 140.3 16.8 258 89-404 122-417 (438)
90 PF11700 ATG22: Vacuole efflux 99.5 4.7E-13 1E-17 137.6 18.6 283 105-427 149-474 (477)
91 PF05977 MFS_3: Transmembrane 99.5 2.5E-13 5.5E-18 141.1 16.7 271 92-415 111-389 (524)
92 TIGR00885 fucP L-fucose:H+ sym 99.5 4.2E-13 9.2E-18 137.0 17.1 247 89-396 99-382 (410)
93 TIGR00886 2A0108 nitrite extru 99.5 1.1E-13 2.5E-18 139.6 11.2 250 89-381 96-365 (366)
94 TIGR02332 HpaX 4-hydroxyphenyl 99.5 3.1E-13 6.8E-18 138.4 14.1 181 235-425 7-194 (412)
95 PRK11652 emrD multidrug resist 99.5 1.1E-12 2.4E-17 133.8 16.6 251 89-395 101-360 (394)
96 PRK11663 regulatory protein Uh 99.5 7.2E-13 1.6E-17 136.8 14.0 177 237-423 24-201 (434)
97 COG2814 AraJ Arabinose efflux 99.4 1E-12 2.2E-17 128.7 13.8 173 239-421 16-189 (394)
98 KOG2504|consensus 99.4 5.6E-14 1.2E-18 145.2 4.8 313 92-421 143-476 (509)
99 PF13347 MFS_2: MFS/sugar tran 99.4 1.1E-11 2.3E-16 128.0 20.4 241 105-397 126-386 (428)
100 PRK03545 putative arabinose tr 99.4 2.1E-12 4.7E-17 131.5 14.8 161 254-424 27-188 (390)
101 PRK10207 dipeptide/tripeptide 99.4 1.2E-11 2.6E-16 128.8 20.6 292 89-392 110-438 (489)
102 PF06609 TRI12: Fungal trichot 99.4 9.6E-12 2.1E-16 129.0 19.0 295 86-393 133-465 (599)
103 TIGR00710 efflux_Bcr_CflA drug 99.4 1.7E-12 3.8E-17 131.9 12.9 170 246-425 15-185 (385)
104 PRK14995 methyl viologen resis 99.4 2E-12 4.2E-17 135.8 13.3 179 237-425 7-187 (495)
105 PRK15403 multidrug efflux syst 99.4 2.6E-12 5.6E-17 131.7 13.7 162 254-425 34-196 (413)
106 TIGR00895 2A0115 benzoate tran 99.4 1E-12 2.3E-17 134.0 10.6 178 237-424 18-196 (398)
107 TIGR00887 2A0109 phosphate:H+ 99.4 5.3E-12 1.2E-16 132.9 16.0 146 273-423 59-227 (502)
108 TIGR00891 2A0112 putative sial 99.4 3.9E-12 8.4E-17 130.2 14.4 179 235-424 11-192 (405)
109 COG2271 UhpC Sugar phosphate p 99.4 2.1E-12 4.5E-17 125.0 11.4 183 231-423 24-209 (448)
110 TIGR00893 2A0114 d-galactonate 99.4 3.2E-12 6.9E-17 130.1 13.6 164 252-425 10-174 (399)
111 PRK10473 multidrug efflux syst 99.4 3.4E-12 7.3E-17 130.2 13.5 179 237-425 4-183 (392)
112 PRK10213 nepI ribonucleoside t 99.4 4.7E-12 1E-16 128.9 14.5 159 256-424 40-199 (394)
113 PRK11551 putative 3-hydroxyphe 99.4 3.6E-12 7.7E-17 130.7 13.7 176 239-424 18-194 (406)
114 TIGR00711 efflux_EmrB drug res 99.4 1.1E-12 2.4E-17 137.8 10.0 175 240-424 6-181 (485)
115 PRK09669 putative symporter Ya 99.4 3.9E-12 8.5E-17 131.8 13.6 240 105-398 132-391 (444)
116 TIGR00924 yjdL_sub1_fam amino 99.4 2.8E-11 6.1E-16 126.0 19.3 322 89-421 107-469 (475)
117 PRK10091 MFS transport protein 99.4 5.2E-12 1.1E-16 128.2 13.5 166 249-424 16-182 (382)
118 COG2211 MelB Na+/melibiose sym 99.4 6.2E-12 1.3E-16 125.9 12.9 243 105-397 135-398 (467)
119 TIGR00805 oat sodium-independe 99.4 1.3E-11 2.9E-16 132.1 16.2 206 89-316 177-415 (633)
120 TIGR00903 2A0129 major facilit 99.4 4.1E-12 9E-17 127.6 11.4 163 252-425 7-170 (368)
121 PRK11462 putative transporter; 99.3 1.7E-11 3.7E-16 127.1 15.7 238 105-397 132-389 (460)
122 PRK10504 putative transporter; 99.3 9.6E-12 2.1E-16 130.1 13.5 174 240-423 14-188 (471)
123 PRK12307 putative sialic acid 99.3 7.3E-12 1.6E-16 129.2 12.4 156 239-404 21-177 (426)
124 TIGR01301 GPH_sucrose GPH fami 99.3 4.9E-11 1.1E-15 122.0 17.9 290 103-425 135-476 (477)
125 COG2270 Permeases of the major 99.3 1.5E-10 3.2E-15 112.5 19.9 272 105-426 138-434 (438)
126 KOG3764|consensus 99.3 5.9E-13 1.3E-17 127.1 3.4 269 90-416 165-450 (464)
127 PRK15402 multidrug efflux syst 99.3 1.3E-11 2.8E-16 126.6 13.5 164 251-424 28-192 (406)
128 PRK10429 melibiose:sodium symp 99.3 1.7E-11 3.6E-16 128.0 14.5 120 274-398 270-396 (473)
129 PLN00028 nitrate transmembrane 99.3 2.2E-11 4.8E-16 127.1 15.2 165 245-420 45-219 (476)
130 KOG0252|consensus 99.3 1.5E-12 3.3E-17 126.6 5.7 151 274-427 88-252 (538)
131 KOG4686|consensus 99.3 3.7E-11 8.1E-16 109.4 14.3 256 88-397 140-416 (459)
132 TIGR00881 2A0104 phosphoglycer 99.3 6.9E-12 1.5E-16 126.9 10.7 165 250-424 9-175 (379)
133 PRK03699 putative transporter; 99.3 2.9E-11 6.2E-16 123.4 14.2 171 235-415 6-178 (394)
134 KOG2615|consensus 99.3 1.4E-11 3E-16 117.2 10.8 270 89-394 126-413 (451)
135 PF07690 MFS_1: Major Facilita 99.3 8.4E-12 1.8E-16 125.0 10.1 162 252-423 12-175 (352)
136 PRK10642 proline/glycine betai 99.3 3.2E-11 6.9E-16 126.6 14.8 176 238-424 18-216 (490)
137 PRK11652 emrD multidrug resist 99.3 2.9E-11 6.2E-16 123.4 14.0 163 252-424 24-187 (394)
138 PTZ00207 hypothetical protein; 99.3 5.4E-11 1.2E-15 124.3 16.1 322 90-425 126-557 (591)
139 PRK10054 putative transporter; 99.3 2.3E-11 5E-16 123.9 13.2 168 245-423 16-185 (395)
140 TIGR00879 SP MFS transporter, 99.3 4.4E-11 9.6E-16 125.1 14.7 146 271-424 72-220 (481)
141 TIGR00900 2A0121 H+ Antiporter 99.3 1.9E-11 4.2E-16 123.0 11.5 156 255-415 18-174 (365)
142 TIGR00886 2A0108 nitrite extru 99.3 2.6E-11 5.6E-16 122.4 12.4 172 241-423 6-191 (366)
143 TIGR00712 glpT glycerol-3-phos 99.3 2.9E-11 6.2E-16 125.2 12.9 179 238-423 29-209 (438)
144 PRK11273 glpT sn-glycerol-3-ph 99.3 5E-11 1.1E-15 123.8 14.7 165 253-424 46-212 (452)
145 PRK03893 putative sialic acid 99.3 2.7E-11 5.8E-16 127.7 12.6 176 237-423 21-197 (496)
146 PRK09874 drug efflux system pr 99.3 5.3E-11 1.1E-15 122.1 14.5 166 247-423 25-196 (408)
147 PRK11102 bicyclomycin/multidru 99.3 2E-11 4.4E-16 123.7 11.2 159 256-424 11-170 (377)
148 KOG1330|consensus 99.3 3.5E-12 7.5E-17 124.7 4.7 179 237-425 34-214 (493)
149 PRK09556 uhpT sugar phosphate 99.3 3.4E-11 7.3E-16 125.7 12.0 180 238-422 31-214 (467)
150 TIGR00788 fbt folate/biopterin 99.3 3.7E-11 8.1E-16 124.7 12.0 292 102-422 140-447 (468)
151 PRK11043 putative transporter; 99.2 1.3E-10 2.8E-15 118.9 15.5 154 256-419 26-180 (401)
152 PRK09584 tppB putative tripept 99.2 1.8E-10 3.9E-15 120.6 16.9 118 272-390 318-439 (500)
153 TIGR00890 2A0111 Oxalate/Forma 99.2 2.3E-11 5.1E-16 122.9 9.9 160 252-422 19-179 (377)
154 TIGR00880 2_A_01_02 Multidrug 99.2 2.9E-11 6.4E-16 103.4 8.6 136 278-423 6-141 (141)
155 PRK11646 multidrug resistance 99.2 8.2E-11 1.8E-15 120.1 12.9 160 253-423 27-188 (400)
156 PRK10406 alpha-ketoglutarate t 99.2 1.3E-10 2.9E-15 120.0 14.3 179 243-424 29-222 (432)
157 TIGR00892 2A0113 monocarboxyla 99.2 6.6E-11 1.4E-15 122.8 12.1 159 252-421 35-195 (455)
158 PRK15462 dipeptide/tripeptide 99.2 1.1E-10 2.4E-15 120.0 13.2 156 244-408 17-177 (493)
159 TIGR00924 yjdL_sub1_fam amino 99.2 1.1E-10 2.4E-15 121.6 13.4 161 241-411 15-183 (475)
160 PF01306 LacY_symp: LacY proto 99.2 5.9E-11 1.3E-15 117.7 10.7 140 274-423 263-403 (412)
161 PRK09848 glucuronide transport 99.2 1.4E-10 3.1E-15 120.4 14.1 110 280-397 274-390 (448)
162 COG0738 FucP Fucose permease [ 99.2 2.2E-10 4.9E-15 110.5 13.7 252 101-412 123-401 (422)
163 KOG2563|consensus 99.2 1.6E-10 3.4E-15 112.8 12.6 271 105-422 163-452 (480)
164 PRK15034 nitrate/nitrite trans 99.2 3.5E-10 7.7E-15 115.0 15.7 184 234-423 32-235 (462)
165 TIGR00894 2A0114euk Na(+)-depe 99.2 5.5E-11 1.2E-15 124.1 9.9 143 273-423 79-222 (465)
166 KOG0255|consensus 99.2 8.4E-11 1.8E-15 124.5 11.3 150 273-436 121-276 (521)
167 PTZ00207 hypothetical protein; 99.2 3.2E-10 6.9E-15 118.5 15.2 165 250-421 41-206 (591)
168 cd06174 MFS The Major Facilita 99.2 1.2E-10 2.7E-15 116.3 11.5 159 247-415 10-169 (352)
169 PF03825 Nuc_H_symport: Nucleo 99.2 1.6E-09 3.5E-14 109.5 19.4 163 252-423 223-398 (400)
170 PRK09705 cynX putative cyanate 99.2 2.6E-10 5.6E-15 116.2 13.7 146 252-408 25-172 (393)
171 PRK15075 citrate-proton sympor 99.2 2.7E-10 5.8E-15 117.8 13.7 158 237-404 16-196 (434)
172 PRK11195 lysophospholipid tran 99.2 2.9E-10 6.4E-15 115.7 13.7 150 260-424 27-177 (393)
173 PRK10489 enterobactin exporter 99.2 7E-10 1.5E-14 114.1 16.6 166 252-423 33-199 (417)
174 TIGR00885 fucP L-fucose:H+ sym 99.2 3.5E-10 7.6E-15 115.6 14.2 137 250-393 17-154 (410)
175 PRK05122 major facilitator sup 99.2 4.8E-10 1E-14 114.6 14.6 163 246-410 25-189 (399)
176 PRK08633 2-acyl-glycerophospho 99.2 2.4E-10 5.2E-15 133.0 13.7 144 274-424 51-203 (1146)
177 PRK09952 shikimate transporter 99.1 5E-10 1.1E-14 115.8 14.4 177 237-424 23-223 (438)
178 TIGR00898 2A0119 cation transp 99.1 1.7E-10 3.7E-15 121.9 10.8 153 258-424 111-267 (505)
179 TIGR00897 2A0118 polyol permea 99.1 4.1E-10 8.9E-15 115.2 13.1 143 251-399 28-172 (402)
180 TIGR00805 oat sodium-independe 99.1 3.9E-10 8.5E-15 120.9 12.9 151 244-395 41-234 (633)
181 PRK10207 dipeptide/tripeptide 99.1 5.9E-10 1.3E-14 116.2 13.9 152 245-406 23-180 (489)
182 PF06609 TRI12: Fungal trichot 99.1 2.9E-10 6.2E-15 118.2 11.1 157 256-423 64-221 (599)
183 KOG2615|consensus 99.1 9.6E-11 2.1E-15 111.5 6.8 140 273-423 71-216 (451)
184 TIGR00806 rfc RFC reduced fola 99.1 1.8E-10 3.9E-15 115.0 8.3 280 90-389 121-409 (511)
185 COG2223 NarK Nitrate/nitrite t 99.1 8.6E-10 1.9E-14 107.2 12.6 179 235-422 13-195 (417)
186 PRK12382 putative transporter; 99.1 8.7E-10 1.9E-14 112.4 13.1 152 249-402 28-181 (392)
187 PRK03633 putative MFS family t 99.1 8E-10 1.7E-14 112.2 12.7 146 240-395 10-156 (381)
188 TIGR00806 rfc RFC reduced fola 99.1 8.5E-10 1.8E-14 110.3 12.4 158 252-421 42-203 (511)
189 PRK15462 dipeptide/tripeptide 99.1 6.2E-09 1.3E-13 107.2 18.7 125 267-392 305-437 (493)
190 PRK06814 acylglycerophosphoeth 99.1 1.1E-09 2.5E-14 127.0 14.5 142 274-423 56-197 (1140)
191 PRK10133 L-fucose transporter; 99.1 2.2E-09 4.8E-14 110.7 14.7 142 245-393 35-177 (438)
192 TIGR00899 2A0120 sugar efflux 99.0 1.6E-09 3.5E-14 109.7 12.3 162 253-424 14-180 (375)
193 PRK09584 tppB putative tripept 99.0 2.7E-09 5.8E-14 111.9 14.1 156 243-407 28-188 (500)
194 PF03209 PUCC: PUCC protein; 99.0 2E-08 4.3E-13 98.1 18.5 245 102-394 109-362 (403)
195 KOG3764|consensus 99.0 4.3E-10 9.4E-15 107.8 6.2 146 271-426 107-253 (464)
196 KOG2532|consensus 99.0 3.1E-09 6.7E-14 108.8 12.0 158 271-436 74-236 (466)
197 PRK11010 ampG muropeptide tran 99.0 7.6E-09 1.6E-13 108.4 13.7 172 244-424 20-198 (491)
198 KOG0253|consensus 98.9 6.8E-09 1.5E-13 98.5 11.2 166 257-435 99-271 (528)
199 TIGR00896 CynX cyanate transpo 98.9 6.5E-09 1.4E-13 104.5 11.7 134 252-397 16-150 (355)
200 TIGR01301 GPH_sucrose GPH fami 98.9 3.3E-08 7.1E-13 101.4 15.9 188 236-425 5-223 (477)
201 TIGR00901 2A0125 AmpG-related 98.9 8.4E-09 1.8E-13 103.7 10.7 162 254-423 6-181 (356)
202 KOG3626|consensus 98.9 4.5E-08 9.7E-13 102.8 16.0 205 90-316 243-477 (735)
203 PRK11902 ampG muropeptide tran 98.9 2E-08 4.4E-13 102.7 13.1 174 242-424 5-185 (402)
204 TIGR00883 2A0106 metabolite-pr 98.9 2E-08 4.3E-13 102.1 12.2 132 281-423 46-193 (394)
205 PF05977 MFS_3: Transmembrane 98.8 2.8E-08 6E-13 103.7 13.1 174 232-413 10-183 (524)
206 PRK15011 sugar efflux transpor 98.8 4E-08 8.8E-13 100.1 13.8 161 253-424 32-198 (393)
207 PRK09528 lacY galactoside perm 98.8 5.1E-08 1.1E-12 100.4 13.7 169 246-422 20-193 (420)
208 PF03137 OATP: Organic Anion T 98.8 1.1E-09 2.5E-14 114.3 0.3 291 89-396 146-515 (539)
209 KOG2504|consensus 98.7 3.3E-08 7.1E-13 102.6 9.0 179 234-423 44-224 (509)
210 KOG2533|consensus 98.7 3.5E-08 7.5E-13 101.5 9.0 143 273-425 84-232 (495)
211 TIGR00882 2A0105 oligosacchari 98.7 1E-07 2.2E-12 97.4 12.1 180 239-423 5-186 (396)
212 PRK11128 putative 3-phenylprop 98.7 1.6E-07 3.4E-12 95.4 13.0 167 245-423 13-181 (382)
213 TIGR00902 2A0127 phenyl propri 98.7 1.6E-07 3.5E-12 95.4 12.6 154 244-408 12-167 (382)
214 COG3104 PTR2 Dipeptide/tripept 98.6 1.8E-06 3.8E-11 86.5 17.2 319 101-421 136-488 (498)
215 TIGR00792 gph sugar (Glycoside 98.6 4.1E-07 9E-12 94.1 13.3 164 257-424 20-198 (437)
216 PF06813 Nodulin-like: Nodulin 98.6 7.2E-07 1.6E-11 83.1 11.6 173 242-420 8-181 (250)
217 COG0738 FucP Fucose permease [ 98.5 1.1E-06 2.4E-11 85.4 12.5 136 252-394 29-165 (422)
218 TIGR02718 sider_RhtX_FptX side 98.5 1.4E-06 3E-11 88.8 13.9 177 239-422 4-186 (390)
219 KOG2816|consensus 98.5 4.8E-07 1E-11 92.4 10.4 253 98-394 128-391 (463)
220 KOG2325|consensus 98.5 2.8E-07 6E-12 93.0 8.4 83 87-169 133-234 (488)
221 COG3104 PTR2 Dipeptide/tripept 98.5 3.8E-07 8.2E-12 91.2 9.2 141 268-416 58-202 (498)
222 KOG2816|consensus 98.5 1.3E-06 2.7E-11 89.4 12.2 138 279-429 71-208 (463)
223 PF03092 BT1: BT1 family; Int 98.4 1.9E-07 4.1E-12 95.9 4.6 290 105-424 109-416 (433)
224 KOG3762|consensus 98.4 6E-07 1.3E-11 89.9 6.9 132 274-415 410-542 (618)
225 PF05631 DUF791: Protein of un 98.4 7.8E-06 1.7E-10 79.0 14.2 156 261-426 59-222 (354)
226 TIGR00889 2A0110 nucleoside tr 98.3 3.7E-06 8E-11 86.4 12.1 157 251-424 17-183 (418)
227 PRK10429 melibiose:sodium symp 98.3 9E-06 2E-10 85.0 14.0 166 252-423 22-204 (473)
228 PRK09669 putative symporter Ya 98.3 6.1E-06 1.3E-10 85.6 12.6 166 254-423 27-207 (444)
229 TIGR00788 fbt folate/biopterin 98.2 7.5E-06 1.6E-10 85.2 11.3 172 240-424 30-212 (468)
230 PF13347 MFS_2: MFS/sugar tran 98.2 8.4E-06 1.8E-10 84.1 11.2 162 258-422 23-200 (428)
231 PF01770 Folate_carrier: Reduc 98.1 7.1E-06 1.5E-10 81.4 7.2 266 102-384 113-391 (412)
232 PRK11462 putative transporter; 98.0 8.2E-05 1.8E-09 77.4 14.3 167 253-423 26-207 (460)
233 KOG2325|consensus 98.0 2.8E-05 6E-10 78.8 9.4 145 273-423 74-232 (488)
234 COG2807 CynX Cyanate permease 98.0 0.0001 2.2E-09 70.9 12.0 155 250-416 26-182 (395)
235 PRK09848 glucuronide transport 97.9 0.00012 2.7E-09 76.0 12.8 117 257-376 29-153 (448)
236 TIGR00926 2A1704 Peptide:H+ sy 97.8 0.00014 3E-09 78.0 12.2 149 266-416 18-178 (654)
237 KOG3810|consensus 97.8 0.00013 2.9E-09 69.3 10.3 257 102-386 114-379 (433)
238 PF05978 UNC-93: Ion channel r 97.8 0.00019 4.2E-09 61.7 10.2 108 273-391 40-147 (156)
239 PF01306 LacY_symp: LacY proto 97.8 4.5E-05 9.8E-10 76.3 6.8 170 241-421 12-189 (412)
240 KOG2563|consensus 97.8 0.00016 3.5E-09 71.5 10.0 120 271-394 80-201 (480)
241 PF11700 ATG22: Vacuole efflux 97.7 0.00056 1.2E-08 70.9 14.3 143 275-425 75-252 (477)
242 COG2211 MelB Na+/melibiose sym 97.7 0.00039 8.4E-09 70.5 11.7 168 252-423 28-210 (467)
243 PF03825 Nuc_H_symport: Nucleo 97.7 0.00028 6.1E-09 71.5 10.6 129 246-386 12-142 (400)
244 KOG3098|consensus 97.6 0.0018 4E-08 65.6 14.7 115 274-390 283-409 (461)
245 PF03209 PUCC: PUCC protein; 97.5 0.00074 1.6E-08 66.6 10.4 126 285-411 29-167 (403)
246 PF06963 FPN1: Ferroportin1 (F 97.4 0.011 2.3E-07 60.1 17.3 128 258-386 280-409 (432)
247 PF03092 BT1: BT1 family; Int 97.3 0.00071 1.5E-08 69.6 8.7 133 285-424 39-179 (433)
248 PF07672 MFS_Mycoplasma: Mycop 97.3 0.006 1.3E-07 56.4 12.7 51 114-164 2-61 (267)
249 COG0477 ProP Permeases of the 97.3 0.0052 1.1E-07 59.4 13.4 115 272-394 41-157 (338)
250 TIGR00880 2_A_01_02 Multidrug 97.2 0.00031 6.8E-09 59.3 3.8 76 91-166 58-140 (141)
251 PF12832 MFS_1_like: MFS_1 lik 97.2 0.0008 1.7E-08 50.3 5.1 65 243-307 7-72 (77)
252 KOG0637|consensus 97.1 0.00091 2E-08 66.4 6.1 42 105-146 165-207 (498)
253 PF02487 CLN3: CLN3 protein; 96.9 0.0036 7.8E-08 62.4 8.6 61 330-391 333-393 (402)
254 PF03137 OATP: Organic Anion T 96.7 0.00023 5.1E-09 74.8 -1.6 147 245-392 12-200 (539)
255 KOG4332|consensus 96.6 0.005 1.1E-07 56.7 6.2 162 262-433 63-233 (454)
256 KOG3626|consensus 96.6 0.022 4.9E-07 60.8 11.8 188 239-427 100-349 (735)
257 TIGR00769 AAA ADP/ATP carrier 96.5 0.04 8.8E-07 56.7 12.8 109 285-393 59-189 (472)
258 PF01770 Folate_carrier: Reduc 96.3 0.036 7.8E-07 55.5 10.8 131 282-423 53-184 (412)
259 KOG4686|consensus 96.1 0.00032 7E-09 64.9 -4.4 116 274-396 83-199 (459)
260 TIGR00769 AAA ADP/ATP carrier 96.0 0.5 1.1E-05 48.8 17.7 37 105-141 152-188 (472)
261 PF00854 PTR2: POT family; In 95.9 0.012 2.6E-07 59.5 5.5 116 302-418 3-121 (372)
262 KOG3098|consensus 95.9 0.044 9.4E-07 55.9 9.3 107 273-390 53-159 (461)
263 COG2270 Permeases of the major 95.6 0.097 2.1E-06 52.0 10.3 103 278-388 66-170 (438)
264 PF06779 DUF1228: Protein of u 95.6 0.026 5.6E-07 42.7 4.9 69 251-319 7-76 (85)
265 PRK03612 spermidine synthase; 95.5 0.063 1.4E-06 56.5 9.3 49 368-416 144-193 (521)
266 KOG0637|consensus 95.5 0.01 2.2E-07 59.2 2.9 151 237-389 34-199 (498)
267 COG3202 ATP/ADP translocase [E 95.0 1.2 2.7E-05 45.4 15.9 66 105-170 171-254 (509)
268 TIGR01272 gluP glucose/galacto 94.8 0.058 1.3E-06 52.9 6.1 63 331-394 9-71 (310)
269 PF00854 PTR2: POT family; In 94.5 0.2 4.4E-06 50.5 9.4 64 100-163 51-121 (372)
270 PF03219 TLC: TLC ATP/ADP tran 94.1 1.9 4E-05 45.0 15.5 37 105-141 167-203 (491)
271 TIGR00939 2a57 Equilibrative N 94.1 0.68 1.5E-05 47.6 12.1 55 331-386 371-425 (437)
272 KOG3574|consensus 94.0 0.78 1.7E-05 45.1 11.4 44 355-398 391-434 (510)
273 KOG1237|consensus 93.4 0.74 1.6E-05 48.9 11.4 140 274-414 77-239 (571)
274 PF01733 Nucleoside_tran: Nucl 93.2 0.02 4.3E-07 56.1 -0.6 110 275-386 187-301 (309)
275 TIGR00926 2A1704 Peptide:H+ sy 92.3 2.5 5.5E-05 45.8 13.7 65 97-161 100-178 (654)
276 PF13000 Acatn: Acetyl-coenzym 92.3 4.2 9.1E-05 41.8 14.1 42 355-396 427-468 (544)
277 PF02487 CLN3: CLN3 protein; 91.9 1.1 2.4E-05 45.0 9.7 132 275-422 64-197 (402)
278 KOG4332|consensus 91.6 3.1 6.8E-05 38.9 11.3 97 273-372 285-383 (454)
279 PF06963 FPN1: Ferroportin1 (F 91.5 8.3 0.00018 39.5 15.6 146 273-419 41-199 (432)
280 KOG1237|consensus 91.5 15 0.00032 39.3 18.0 64 331-395 457-520 (571)
281 KOG3762|consensus 91.3 0.12 2.6E-06 52.9 2.1 68 245-312 20-88 (618)
282 KOG1479|consensus 90.3 3.9 8.4E-05 41.0 11.5 60 237-296 19-82 (406)
283 COG4262 Predicted spermidine s 90.0 1.9 4.1E-05 41.8 8.6 88 330-420 103-191 (508)
284 PF03219 TLC: TLC ATP/ADP tran 88.6 4.4 9.5E-05 42.2 11.0 113 282-394 71-205 (491)
285 COG3202 ATP/ADP translocase [E 88.2 6.1 0.00013 40.5 11.3 113 282-394 74-209 (509)
286 PF05631 DUF791: Protein of un 87.6 3.7 7.9E-05 40.4 9.1 60 236-296 245-304 (354)
287 KOG3574|consensus 87.4 6.2 0.00014 39.1 10.4 60 243-306 38-104 (510)
288 KOG1479|consensus 86.7 5.2 0.00011 40.1 9.8 110 279-392 292-401 (406)
289 TIGR00939 2a57 Equilibrative N 83.2 6.3 0.00014 40.6 9.0 31 334-366 108-138 (437)
290 KOG3312|consensus 83.0 1.4 3E-05 36.3 3.2 7 29-35 44-50 (186)
291 PF05297 Herpes_LMP1: Herpesvi 83.0 0.38 8.2E-06 44.4 0.0 18 408-425 173-190 (381)
292 PRK10263 DNA translocase FtsK; 81.5 3.3 7.1E-05 47.5 6.5 20 279-298 61-80 (1355)
293 COG1457 CodB Purine-cytosine p 79.2 80 0.0017 32.4 17.2 31 271-301 129-159 (442)
294 KOG3880|consensus 75.9 2.3 4.9E-05 40.7 2.7 130 275-421 67-200 (409)
295 KOG2812|consensus 75.7 4.5 9.8E-05 38.7 4.6 12 88-99 322-333 (426)
296 KOG3925|consensus 75.0 6.9 0.00015 37.8 5.6 8 164-171 142-149 (371)
297 PF11671 Apis_Csd: Complementa 74.7 5.9 0.00013 31.9 4.3 8 105-112 98-105 (146)
298 PRK03612 spermidine synthase; 74.6 29 0.00062 36.7 10.9 28 365-392 145-172 (521)
299 smart00786 SHR3_chaperone ER m 73.7 3.1 6.6E-05 36.7 2.8 8 20-27 155-162 (196)
300 PF10669 Phage_Gp23: Protein g 73.2 6.2 0.00013 29.9 3.9 7 19-25 37-43 (121)
301 KOG4364|consensus 72.6 4.4 9.6E-05 42.2 4.0 7 90-96 376-382 (811)
302 COG5336 Uncharacterized protei 70.8 17 0.00037 28.5 5.9 36 362-397 35-70 (116)
303 KOG3810|consensus 69.9 20 0.00044 35.2 7.5 125 289-424 61-186 (433)
304 PF11947 DUF3464: Protein of u 67.2 9.8 0.00021 32.4 4.4 33 352-384 113-145 (153)
305 COG1480 Predicted membrane-ass 66.6 43 0.00094 35.8 9.7 24 283-306 383-406 (700)
306 KOG3925|consensus 66.4 6.3 0.00014 38.1 3.4 8 18-25 17-24 (371)
307 PF13000 Acatn: Acetyl-coenzym 66.1 52 0.0011 34.2 9.9 21 286-306 56-76 (544)
308 KOG3097|consensus 66.1 19 0.00042 35.0 6.5 75 278-363 66-140 (390)
309 COG1288 Predicted membrane pro 65.8 1.6E+02 0.0035 30.0 13.1 28 142-169 217-246 (481)
310 PF12805 FUSC-like: FUSC-like 64.1 20 0.00043 34.5 6.6 14 331-344 22-35 (284)
311 TIGR01667 YCCS_YHJK integral m 61.6 19 0.00041 39.5 6.5 41 298-346 55-95 (701)
312 PF06813 Nodulin-like: Nodulin 60.2 17 0.00036 34.2 5.0 60 106-166 120-183 (250)
313 COG0477 ProP Permeases of the 59.9 9 0.00019 36.3 3.4 68 90-157 100-177 (338)
314 KOG2881|consensus 58.7 1.6E+02 0.0035 27.6 13.7 35 282-316 252-286 (294)
315 PF11151 DUF2929: Protein of u 58.4 36 0.00078 23.6 5.1 43 126-168 14-56 (57)
316 TIGR00844 c_cpa1 na(+)/h(+) an 58.2 3E+02 0.0066 30.7 14.7 10 142-151 98-107 (810)
317 KOG2927|consensus 57.4 6.8 0.00015 37.8 1.9 11 106-116 205-215 (372)
318 PF02990 EMP70: Endomembrane p 56.6 1.6E+02 0.0035 31.1 12.3 25 276-300 303-327 (521)
319 PF10500 SR-25: Nuclear RNA-sp 56.4 19 0.00041 32.5 4.3 16 164-179 177-192 (225)
320 COG2274 SunT ABC-type bacterio 54.8 45 0.00099 36.6 7.9 26 403-428 297-322 (709)
321 PF09605 Trep_Strep: Hypotheti 54.2 1.6E+02 0.0035 26.2 10.3 43 276-318 34-76 (186)
322 PF05297 Herpes_LMP1: Herpesvi 52.9 4.5 9.8E-05 37.6 0.0 10 297-306 72-81 (381)
323 PRK10263 DNA translocase FtsK; 52.5 22 0.00047 41.2 5.1 35 280-314 141-175 (1355)
324 TIGR01666 YCCS hypothetical me 51.8 86 0.0019 34.5 9.4 48 291-346 44-95 (704)
325 TIGR01478 STEVOR variant surfa 50.0 13 0.00027 35.0 2.3 24 141-164 259-282 (295)
326 KOG2422|consensus 49.0 6 0.00013 40.9 0.1 12 486-497 584-595 (665)
327 PRK14231 camphor resistance pr 48.5 1.4E+02 0.003 24.8 8.1 15 348-363 71-85 (129)
328 COG3162 Predicted membrane pro 47.9 1.3E+02 0.0028 23.4 7.0 53 235-288 23-75 (102)
329 KOG1996|consensus 46.9 60 0.0013 30.6 6.1 20 90-109 202-221 (378)
330 PF11299 DUF3100: Protein of u 46.8 39 0.00085 30.9 4.9 91 291-386 128-223 (241)
331 PRK14212 camphor resistance pr 45.0 1.5E+02 0.0034 24.5 7.9 16 347-363 74-89 (128)
332 PTZ00370 STEVOR; Provisional 45.0 9.9 0.00021 35.7 0.9 34 391-424 249-282 (296)
333 PF12670 DUF3792: Protein of u 44.9 1.7E+02 0.0036 23.7 10.7 35 274-308 38-72 (116)
334 PF02554 CstA: Carbon starvati 44.7 3.4E+02 0.0073 27.2 12.4 38 109-147 48-86 (376)
335 PRK14219 camphor resistance pr 44.6 1.3E+02 0.0028 25.0 7.4 15 348-363 74-88 (132)
336 PTZ00372 endonuclease 4-like p 44.4 11 0.00025 38.0 1.3 11 10-20 35-45 (413)
337 COG5336 Uncharacterized protei 44.1 46 0.00099 26.3 4.2 17 281-297 53-69 (116)
338 PRK15015 carbon starvation pro 43.9 4.6E+02 0.0099 28.5 15.4 37 109-145 79-115 (701)
339 PF03222 Trp_Tyr_perm: Tryptop 43.8 3.6E+02 0.0079 27.3 14.6 12 288-299 136-147 (394)
340 KOG3817|consensus 43.3 88 0.0019 30.5 6.8 26 281-306 170-195 (452)
341 PRK14204 camphor resistance pr 42.8 1.7E+02 0.0037 24.2 7.8 16 306-321 40-55 (127)
342 PF06123 CreD: Inner membrane 42.6 1.4E+02 0.0031 30.5 8.7 32 286-317 307-338 (430)
343 TIGR02230 ATPase_gene1 F0F1-AT 42.4 45 0.00097 26.2 4.0 34 124-157 49-90 (100)
344 TIGR02185 Trep_Strep conserved 41.9 2.6E+02 0.0055 25.0 11.4 37 276-312 36-72 (189)
345 PRK14217 camphor resistance pr 41.8 2.1E+02 0.0045 23.9 8.2 15 307-321 40-54 (134)
346 KOG3880|consensus 41.7 59 0.0013 31.5 5.4 61 329-390 339-399 (409)
347 PTZ00370 STEVOR; Provisional 41.6 20 0.00044 33.7 2.4 27 138-164 252-278 (296)
348 PRK14230 camphor resistance pr 40.0 1.3E+02 0.0029 24.5 6.6 15 306-320 36-50 (119)
349 PF07857 DUF1632: CEO family ( 39.9 1.3E+02 0.0027 28.4 7.3 57 364-420 74-135 (254)
350 COG0814 SdaC Amino acid permea 39.8 4.3E+02 0.0093 27.0 13.0 31 113-143 9-39 (415)
351 PRK11715 inner membrane protei 39.5 1.8E+02 0.0039 29.9 8.9 32 286-317 313-344 (436)
352 PRK14210 camphor resistance pr 39.2 1.9E+02 0.0041 23.9 7.6 16 347-363 76-91 (127)
353 PRK14196 chromosome condensati 39.1 2.1E+02 0.0045 23.6 7.8 15 348-363 75-89 (127)
354 KOG2887|consensus 38.7 1.8E+02 0.0038 25.4 7.3 54 356-415 100-153 (175)
355 PF04341 DUF485: Protein of un 38.3 1.1E+02 0.0024 23.5 5.7 30 236-265 16-45 (91)
356 PF01925 TauE: Sulfite exporte 37.8 2.3E+02 0.005 26.1 9.1 22 93-115 14-35 (240)
357 PRK14195 camphor resistance pr 37.7 2.2E+02 0.0048 23.4 7.7 18 345-363 72-89 (125)
358 TIGR02865 spore_II_E stage II 37.5 5.9E+02 0.013 28.6 13.3 10 502-511 394-403 (764)
359 PRK13629 threonine/serine tran 37.5 4.8E+02 0.01 26.9 12.0 43 113-156 19-61 (443)
360 KOG2505|consensus 36.8 64 0.0014 33.0 5.0 7 2-8 455-461 (591)
361 KOG0112|consensus 36.3 48 0.001 36.4 4.4 8 107-114 812-819 (975)
362 PF13829 DUF4191: Domain of un 36.1 33 0.00071 31.3 2.8 70 120-189 27-99 (224)
363 PRK14223 camphor resistance pr 35.6 2.5E+02 0.0054 23.0 7.9 19 345-364 69-87 (122)
364 PRK14199 camphor resistance pr 35.4 2.6E+02 0.0056 23.2 8.1 16 348-364 78-93 (128)
365 PRK14200 camphor resistance pr 35.3 2.6E+02 0.0056 23.1 7.9 16 347-363 77-92 (127)
366 PF05313 Pox_P21: Poxvirus P21 35.1 2.5E+02 0.0055 24.6 7.7 18 363-380 111-128 (189)
367 PF15628 RRM_DME: RRM in Demet 34.9 25 0.00054 27.2 1.5 17 495-511 62-78 (103)
368 KOG3809|consensus 34.5 9.5 0.00021 37.7 -0.9 17 4-20 123-139 (583)
369 TIGR00927 2A1904 K+-dependent 34.3 1.1E+02 0.0024 34.4 6.8 26 282-307 978-1003(1096)
370 PF14235 DUF4337: Domain of un 34.3 2.2E+02 0.0047 24.6 7.4 41 115-160 112-152 (157)
371 PRK14234 camphor resistance pr 34.0 2.7E+02 0.0058 22.9 7.9 16 347-363 75-90 (124)
372 KOG2601|consensus 33.7 4.4E+02 0.0095 26.7 9.9 40 372-411 178-217 (503)
373 PF10131 PTPS_related: 6-pyruv 33.5 4.3E+02 0.0094 28.7 11.2 20 282-301 33-52 (616)
374 PF06912 DUF1275: Protein of u 32.8 3.7E+02 0.0081 24.2 15.8 19 275-293 51-69 (209)
375 PRK14226 camphor resistance pr 32.7 2.9E+02 0.0063 22.9 8.3 16 347-363 78-93 (130)
376 PRK14227 camphor resistance pr 32.2 2.9E+02 0.0062 22.7 7.5 16 347-363 74-89 (124)
377 PF06570 DUF1129: Protein of u 32.2 3.6E+02 0.0079 24.4 9.0 111 306-416 86-197 (206)
378 PF12273 RCR: Chitin synthesis 31.6 19 0.00041 29.9 0.5 18 144-161 1-18 (130)
379 COG0534 NorM Na+-driven multid 31.3 6E+02 0.013 26.3 11.6 27 275-301 62-88 (455)
380 PF04281 Tom22: Mitochondrial 31.1 1.2E+02 0.0025 25.5 5.0 23 358-380 60-82 (137)
381 PRK14218 camphor resistance pr 31.0 3.2E+02 0.0068 22.8 7.6 15 348-363 81-95 (133)
382 COG3389 Uncharacterized protei 31.0 4.2E+02 0.0092 24.3 8.7 29 277-305 35-63 (277)
383 KOG0055|consensus 30.8 3.2E+02 0.007 32.0 9.8 21 141-161 806-826 (1228)
384 TIGR00986 3a0801s05tom22 mitoc 30.3 86 0.0019 26.3 4.0 31 105-135 56-86 (145)
385 KOG4255|consensus 30.2 5.2E+02 0.011 25.5 9.6 81 304-391 83-164 (439)
386 COG4708 Predicted membrane pro 29.6 2E+02 0.0044 24.1 6.0 27 275-301 139-165 (169)
387 PRK14222 camphor resistance pr 29.2 3.1E+02 0.0068 22.5 7.3 15 348-363 75-89 (124)
388 PRK14229 camphor resistance pr 28.8 2.2E+02 0.0047 22.8 6.1 16 347-363 64-79 (108)
389 PF06800 Sugar_transport: Suga 28.8 5.2E+02 0.011 24.6 13.6 33 395-427 218-250 (269)
390 COG4232 Thiol:disulfide interc 28.7 7.4E+02 0.016 26.4 11.9 24 228-251 241-264 (569)
391 PF12832 MFS_1_like: MFS_1 lik 28.5 2.4E+02 0.0053 20.7 7.1 40 368-407 34-73 (77)
392 PF03547 Mem_trans: Membrane t 28.1 73 0.0016 32.1 4.2 14 284-297 9-22 (385)
393 PRK14198 camphor resistance pr 28.0 3.4E+02 0.0074 22.3 7.6 15 348-363 74-88 (124)
394 KOG1277|consensus 27.8 79 0.0017 32.1 4.0 38 102-141 313-350 (593)
395 COG0670 Integral membrane prot 27.4 5.1E+02 0.011 24.1 10.2 9 281-289 66-74 (233)
396 PRK01862 putative voltage-gate 27.4 8E+02 0.017 26.4 16.9 35 105-140 150-186 (574)
397 COG2836 Uncharacterized conser 27.1 5E+02 0.011 23.9 9.3 31 267-297 161-191 (232)
398 PRK14232 camphor resistance pr 27.1 2.4E+02 0.0052 23.0 6.2 16 347-363 68-83 (120)
399 PRK14215 camphor resistance pr 27.1 3.6E+02 0.0078 22.2 8.0 16 347-363 74-89 (126)
400 PF03616 Glt_symporter: Sodium 26.9 6.6E+02 0.014 25.2 12.0 47 250-296 135-181 (368)
401 PF06779 DUF1228: Protein of u 26.8 1.1E+02 0.0024 23.2 3.8 60 100-159 12-72 (85)
402 PF01086 Clathrin_lg_ch: Clath 26.8 77 0.0017 29.3 3.6 7 19-25 116-122 (225)
403 PF04281 Tom22: Mitochondrial 26.7 92 0.002 26.1 3.7 31 106-136 59-89 (137)
404 PRK14213 camphor resistance pr 26.4 2.6E+02 0.0057 22.7 6.3 15 348-363 71-85 (118)
405 COG3448 CBS-domain-containing 26.1 27 0.00058 33.1 0.5 15 389-403 140-154 (382)
406 PRK14202 camphor resistance pr 26.1 3.8E+02 0.0082 22.2 7.8 16 347-363 77-92 (128)
407 PRK10697 DNA-binding transcrip 26.0 3.2E+02 0.0068 22.3 6.5 13 158-170 57-69 (118)
408 PLN02381 valyl-tRNA synthetase 25.6 62 0.0013 37.6 3.3 16 288-303 643-658 (1066)
409 PF06027 DUF914: Eukaryotic pr 25.5 3.9E+02 0.0085 26.4 8.4 16 403-418 289-304 (334)
410 PRK10457 hypothetical protein; 25.1 1.6E+02 0.0035 22.2 4.4 53 105-157 14-72 (82)
411 PF04695 Pex14_N: Peroxisomal 25.1 30 0.00065 29.0 0.6 17 495-511 31-47 (136)
412 PF03817 MadL: Malonate transp 25.0 2.7E+02 0.006 22.5 5.8 29 274-302 92-120 (125)
413 PRK14205 camphor resistance pr 24.7 3.2E+02 0.0069 22.2 6.5 17 347-364 69-85 (118)
414 KOG1277|consensus 24.5 2.7E+02 0.0058 28.5 6.9 17 285-301 342-359 (593)
415 PTZ00362 hypothetical protein; 24.4 18 0.0004 36.4 -0.9 7 493-499 386-392 (479)
416 KOG0388|consensus 24.3 1.1E+02 0.0024 33.1 4.5 12 145-156 618-629 (1185)
417 TIGR01478 STEVOR variant surfa 24.1 57 0.0012 30.8 2.2 28 396-423 258-285 (295)
418 PF00860 Xan_ur_permease: Perm 24.0 4.1E+02 0.0088 26.9 8.7 37 274-313 37-73 (389)
419 PF05978 UNC-93: Ion channel r 23.6 4.7E+02 0.01 22.4 9.0 39 117-155 40-78 (156)
420 PRK14208 camphor resistance pr 23.6 4.2E+02 0.0091 21.8 7.9 15 306-320 37-51 (126)
421 KOG4112|consensus 23.4 2.4E+02 0.0052 21.7 4.9 33 383-417 36-68 (101)
422 COG1079 Uncharacterized ABC-ty 23.3 7E+02 0.015 24.2 9.5 96 283-390 20-115 (304)
423 PRK14206 camphor resistance pr 23.1 4.3E+02 0.0093 21.8 8.1 17 346-363 74-90 (127)
424 PRK14220 camphor resistance pr 23.1 3E+02 0.0065 22.5 6.0 14 307-320 39-52 (120)
425 PF15061 DUF4538: Domain of un 23.0 70 0.0015 22.1 1.9 20 142-161 4-23 (58)
426 CHL00161 secY preprotein trans 22.9 7.4E+02 0.016 25.4 10.2 25 485-511 306-330 (417)
427 KOG2223|consensus 22.8 2.1E+02 0.0045 29.0 5.8 11 102-112 273-283 (586)
428 TIGR00918 2A060602 The Eukaryo 22.8 5.7E+02 0.012 30.1 10.2 21 338-359 1025-1045(1145)
429 PF06123 CreD: Inner membrane 22.6 8.5E+02 0.018 25.1 10.4 10 88-97 141-150 (430)
430 PRK14197 camphor resistance pr 22.5 4.1E+02 0.0088 21.8 6.8 15 348-363 74-88 (124)
431 PF02537 CRCB: CrcB-like prote 22.3 4.1E+02 0.0089 21.3 7.8 42 280-321 5-48 (117)
432 COG0239 CrcB Integral membrane 22.2 4.5E+02 0.0098 21.7 8.2 44 278-321 7-53 (126)
433 COG0733 Na+-dependent transpor 22.2 5.6E+02 0.012 26.3 8.8 12 251-262 230-241 (439)
434 PRK14224 camphor resistance pr 22.1 4.5E+02 0.0098 21.7 8.7 15 348-363 76-90 (126)
435 PF01405 PsbT: Photosystem II 22.1 1.4E+02 0.0029 17.4 2.6 10 160-169 19-28 (29)
436 PRK11469 hypothetical protein; 21.9 5.7E+02 0.012 22.8 8.5 37 280-316 145-181 (188)
437 TIGR00986 3a0801s05tom22 mitoc 21.8 1.5E+02 0.0032 25.0 3.9 22 358-379 58-79 (145)
438 PRK14207 camphor resistance pr 21.7 4.5E+02 0.0098 21.5 8.3 16 347-363 74-89 (123)
439 KOG3312|consensus 21.7 1.2E+02 0.0025 25.5 3.3 46 19-64 37-82 (186)
440 PRK11715 inner membrane protei 21.6 8.8E+02 0.019 25.0 10.2 111 232-352 305-429 (436)
441 PF06645 SPC12: Microsomal sig 21.6 1.6E+02 0.0034 21.9 3.7 41 122-162 12-53 (76)
442 PTZ00399 cysteinyl-tRNA-synthe 21.6 1.2E+02 0.0025 33.2 4.4 42 16-57 549-590 (651)
443 PF08997 UCR_6-4kD: Ubiquinol- 21.5 69 0.0015 22.0 1.6 42 106-147 1-42 (56)
444 PF04024 PspC: PspC domain; I 21.4 1.3E+02 0.0028 21.2 3.1 26 143-168 31-60 (61)
445 PRK14201 camphor resistance pr 21.2 4.6E+02 0.0099 21.4 8.1 115 276-395 3-118 (121)
446 PTZ00265 multidrug resistance 21.1 48 0.001 40.1 1.4 29 57-85 672-700 (1466)
447 PRK14216 camphor resistance pr 21.1 4.9E+02 0.011 21.7 8.8 123 268-395 1-126 (132)
448 PTZ00399 cysteinyl-tRNA-synthe 21.1 98 0.0021 33.7 3.6 50 17-66 542-592 (651)
449 COG2233 UraA Xanthine/uracil p 20.9 8.8E+02 0.019 25.1 10.0 163 241-419 18-193 (451)
450 PF10225 DUF2215: Uncharacteri 20.6 7.1E+02 0.015 23.4 10.5 148 246-409 14-162 (249)
451 PF13038 DUF3899: Domain of un 20.5 62 0.0013 24.9 1.5 37 20-56 34-70 (92)
452 PRK02237 hypothetical protein; 20.4 2.5E+02 0.0054 22.4 4.7 73 239-319 33-105 (109)
453 PRK14209 camphor resistance pr 20.2 5E+02 0.011 21.4 7.2 114 274-395 3-120 (124)
454 COG4956 Integral membrane prot 20.1 7.3E+02 0.016 24.1 8.5 109 238-346 1-126 (356)
455 PF10183 ESSS: ESSS subunit of 20.1 1.2E+02 0.0025 24.2 3.0 26 142-167 58-84 (105)
456 PRK11875 psbT photosystem II r 20.1 1.8E+02 0.0038 17.2 2.8 25 145-169 4-28 (31)
457 TIGR03173 pbuX xanthine permea 20.1 9.2E+02 0.02 24.4 12.7 154 246-415 2-162 (406)
458 KOG0163|consensus 20.0 85 0.0019 33.9 2.7 49 14-62 931-979 (1259)
No 1
>KOG0569|consensus
Probab=100.00 E-value=4.5e-34 Score=286.07 Aligned_cols=341 Identities=25% Similarity=0.384 Sum_probs=278.4
Q ss_pred ccccccccccc--chhhhhhhhhccCcccccchhchhhhhHHHHHHHHHhhcccc------chHHHHHHHHHHHHHHHHH
Q psy15864 89 KGTFLYKMAAP--LVLVLTYVAEITQPHLRGMLSATASMTTIFGTVSQLFLGSFL------HWRSAAILNLLFPILALCA 160 (553)
Q Consensus 89 ~gr~~~G~ga~--~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~lG~~l~~~l~~~l------gWr~~f~i~~i~~li~~i~ 160 (553)
-||++.|+..+ ..+.+.|+.|..|.+.||....+.+++..+|.+++..++..- .|++.+.+.++++++.+++
T Consensus 121 ~GR~i~Gl~~gl~~~~~pmyl~E~sP~~~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i~~~~~l~~ 200 (485)
T KOG0569|consen 121 LGRLIVGLACGLSTGLVPMYLTEISPKNLRGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPLIPALLQLAL 200 (485)
T ss_pred HHHHHHHHHhHHHHHHHHHHHhhcChhhhccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHHHHHHHHHHH
Confidence 48999998776 457889999999999999999999999999999997766542 7999999999999999999
Q ss_pred hccccCCceeeee-cCChHHHHHHHHHHcCCCCCcchHHH-HHHHHHHHHHHHHHhcCCCCCCChhhhhhhhhcchhHHH
Q psy15864 161 LYFIPESPHWLIS-QGRMQEASASLCWLRGWVTPDKVQTE-LSQITKAIEESELKRLGKDGQRRPNYRMYMRRTFLLPYA 238 (553)
Q Consensus 161 ~~~lpEsp~~l~~-~~~~~~a~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (553)
+.++||||+|+.. +++.++|++.++.+++..+.+...++ .++.++. . .......+.++.+.++..++...
T Consensus 201 l~~~PESPk~Ll~~k~~~~~A~~sl~~y~G~~~~~~~~e~~~~e~~~~----~----~~~~~~~sl~~~~~~~~lR~~~~ 272 (485)
T KOG0569|consen 201 LPFLPESPKYLLIKKGDEEEARKALKFYRGKEDVEAEIEEMLREIEEE----E----LEKKKQISLRQLLKNPTLRRPLL 272 (485)
T ss_pred HhcCCCCcchHHHHcCCHHHHHHHHHHHhCCCcchhHHHHHHHHHHHh----c----cccccCCcHHHHhcCcchhHHHH
Confidence 9999999999988 89999999999999986554332222 2221111 1 11112223444455567777788
Q ss_pred HHHHHHHHHhhhhhHHHHhhHHHHHHhhCCCCCh-HHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHHHH
Q psy15864 239 IVTSLFFIGQFGGMTTLQTYAVGIFESIHAPLDP-YFATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAACFIVV 317 (553)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~ 317 (553)
+.+.+..+.++++.+...+|...++...|++.+. .+.....++..++.++++.++.||+|||+++++++.++.+..+++
T Consensus 273 i~~~v~~~qq~sGi~ai~~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~~~~~~~~ 352 (485)
T KOG0569|consen 273 IGIVVSFAQQFSGINAIFFYSTSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLMAVALLLM 352 (485)
T ss_pred HHHHHHHHHHhcCcceeHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHH
Confidence 8888899999999999999999999999987654 477888899999999999999999999999999999998888877
Q ss_pred HHHHHhhcccCCCCChhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhHHHHhhcc
Q psy15864 318 AVYAQFHLSYGWDSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYYPMLDTFH 397 (553)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~~~g 397 (553)
...............+..+++.+++.++++.+.+|+++.+.+|++|+..|+++.++...+.++..++....+.++.+..|
T Consensus 353 ~~~~~l~~~~~~~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~g 432 (485)
T KOG0569|consen 353 SIALFLSNSFGSWLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQNVIG 432 (485)
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 76543321110001122356677778888899999999999999999999999999999999999999999999998888
Q ss_pred chhhHHHHHHHHHHHHhhheEEcccCCCCChHHHHHHHhcc
Q psy15864 398 LWGTLYFYAAISVVGTLYMYFVMPETEGRTLRDIEEHFADK 438 (553)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~pet~~~~~~~~~~~~~~~ 438 (553)
. ..++++.+.+++.++.+++++||||||+..|+.+..+.+
T Consensus 433 ~-~~filF~i~~~~~~i~~~~~lPETkgr~~~eI~~~~~~~ 472 (485)
T KOG0569|consen 433 P-YVFILFVIPLAIFLIYLYRYLPETKGRTPYEIIEELEKR 472 (485)
T ss_pred c-hhhHHHHHHHHHHHHHHHHhCcccCCCCHHHHHHHHHhC
Confidence 5 788888999999999999999999999999988877655
No 2
>KOG0254|consensus
Probab=99.97 E-value=5.7e-29 Score=261.44 Aligned_cols=350 Identities=26% Similarity=0.483 Sum_probs=280.7
Q ss_pred Ccccccccccccccc--chhhhhhhhhccCcccccchhchhhhhHHHHHHHHHhhcccc-----chHHHHHHHHHHHHHH
Q psy15864 85 NNEEKGTFLYKMAAP--LVLVLTYVAEITQPHLRGMLSATASMTTIFGTVSQLFLGSFL-----HWRSAAILNLLFPILA 157 (553)
Q Consensus 85 ~~~~~gr~~~G~ga~--~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~lG~~l~~~l~~~l-----gWr~~f~i~~i~~li~ 157 (553)
..-.-||++.|+|.+ ..+++.|++|+.|++.||...++.+.+..+|.+++.+++... +||.++++..+++++.
T Consensus 143 ~~l~~GR~l~G~g~G~~~~~~piy~sEiap~~~RG~l~~~~~l~~~~Gi~~~~~~~~~~~~~~~~Wr~~~~~~~i~~~~~ 222 (513)
T KOG0254|consen 143 YQLIVGRILTGLGVGGASVLAPVYISEIAPAHIRGTLVSLYQLFITIGILLGYCINYGTSKVYAGWRIPLGLALIPAVIL 222 (513)
T ss_pred HHHHHHHHHhccchhhhhhcchhhHhhcCChhhhHHHHHHHHHHHHHHHHHHHHHhhhhccCCccHHHHHHHHHHHHHHH
Confidence 345679999999876 458889999999999999999999999999999998888776 6999999999999999
Q ss_pred HHHhccccCCceeeeecCChHHHHHHHHHHcCCCCCcchHHHHHHHHHHHHHHHHHhcCCCCCCChhhhhhhhhcchhHH
Q psy15864 158 LCALYFIPESPHWLISQGRMQEASASLCWLRGWVTPDKVQTELSQITKAIEESELKRLGKDGQRRPNYRMYMRRTFLLPY 237 (553)
Q Consensus 158 ~i~~~~lpEsp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (553)
++..+++||||+|+..+++.++++..+..+++.. .++...+...+........ ........+..++.+..+++.
T Consensus 223 ~~~~~~~pesp~~L~~~g~~~~a~~~l~~l~g~~-~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~l~~~~~~~~~ 296 (513)
T KOG0254|consen 223 ALGMLFLPESPRWLIEKGRLEEAKRSLKRLRGLS-PEDVEVELELLKIKLLVEA-----EVAEGKASWGELFSPKVRKRL 296 (513)
T ss_pred HHHHHhCCCChHHHHHcCChHHHHHHHHHHhCCC-CcchHHHHHHHHHHHHHhh-----hcccccccHHHhcCcchHHHH
Confidence 8888889999999999999999999999998854 3334444444431111110 001111135555556677888
Q ss_pred HHHHHHHHHHhhhhhHHHHhhHHHHHHhhCCCCChHHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHHHH
Q psy15864 238 AIVTSLFFIGQFGGMTTLQTYAVGIFESIHAPLDPYFATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAACFIVV 317 (553)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~ 317 (553)
++.+.+..+.+++++....+|.+.+++..|......+...+.++..+++++++.++.||+|||+.++.+.+.+.++.+++
T Consensus 297 ~i~~~l~~fqq~tG~~~~~~Y~~~if~~~g~~~~~~~~~~~~~~v~~~~t~~~~~lvd~~gRr~lll~s~~~m~~~~~~~ 376 (513)
T KOG0254|consen 297 IIGLLLQLFQQLTGINYVFYYSTTIFKSAGLKSDTFLASIILGVVNFLGTLVATYLVDRFGRRKLLLFGAAGMSICLVIL 376 (513)
T ss_pred HHHHHHHHHHHHhCCceEEeehHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHhHHHHHHHHHHH
Confidence 88899999999999999999999999998887555667777888889999999999999999999999999999999988
Q ss_pred HHHHHhhccc---CCCCChhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhHHHHh
Q psy15864 318 AVYAQFHLSY---GWDSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYYPMLD 394 (553)
Q Consensus 318 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~ 394 (553)
+......... .....+..++..+++..+++.++++++|.+.+|++|.+.|+.+.++...+.++.+++....+..+..
T Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v~~~~~~~~~ 456 (513)
T KOG0254|consen 377 AVVGVFALYYPNSSKGAGWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFLISFFFPFITE 456 (513)
T ss_pred HHHHHHhccCCCcccchhHHHHHHHHHHHHHHhcccccchhhhhhccCcHhHHhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8766543321 1234455666677777778889999999999999999999999999999999999888777777666
Q ss_pred hccchhhHHHHHHHHHHHHh-hheEEcccCCCCChHHHHHHHhccCC
Q psy15864 395 TFHLWGTLYFYAAISVVGTL-YMYFVMPETEGRTLRDIEEHFADKGK 440 (553)
Q Consensus 395 ~~g~~~~~~~~~~~~~~~~~-~~~~~~pet~~~~~~~~~~~~~~~~~ 440 (553)
..+....+.++++++.+..+ ..++++|||+++++++++..+.....
T Consensus 457 ~~~~~~~f~~f~~~~~~~~~~fv~~~~pETkg~sleei~~~~~~~~~ 503 (513)
T KOG0254|consen 457 ALGIGGTFGYFGGICLLSLIIFVFFFVPETKGLTLEEINELFEEGIK 503 (513)
T ss_pred hccccchHHHHHHHHHHHHHHHheEEcccCCCCcHHHHHHHHHcCCc
Confidence 55434566677777777776 78899999999999999998776543
No 3
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.96 E-value=9.7e-29 Score=259.63 Aligned_cols=327 Identities=17% Similarity=0.202 Sum_probs=215.6
Q ss_pred ccccccccccccc--chhhhhhhhhccCcccccchhchhhhhHHHHHHHHHhhccc------------------------
Q psy15864 87 EEKGTFLYKMAAP--LVLVLTYVAEITQPHLRGMLSATASMTTIFGTVSQLFLGSF------------------------ 140 (553)
Q Consensus 87 ~~~gr~~~G~ga~--~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~lG~~l~~~l~~~------------------------ 140 (553)
---+|+++|++.+ .+..++|++|++|++.||+++++..++..+|.+++++++..
T Consensus 118 ~~~~r~l~G~~~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (502)
T TIGR00887 118 LCFWRFWLGVGIGGDYPLSAIITSEFATKKWRGAMMAAVFAMQGFGILAGAIVALIVLAGFKHSLEAAADEASCTGSCVP 197 (502)
T ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccc
Confidence 4478999988765 57788999999999999999999999999988887765421
Q ss_pred ---cchHHHHHHHHHHHHHHHHHhccccCCceeeeecCChH-HHHHHHHHHcCCCCCcchHHHHHHHHHHHHHHHHHhcC
Q psy15864 141 ---LHWRSAAILNLLFPILALCALYFIPESPHWLISQGRMQ-EASASLCWLRGWVTPDKVQTELSQITKAIEESELKRLG 216 (553)
Q Consensus 141 ---lgWr~~f~i~~i~~li~~i~~~~lpEsp~~l~~~~~~~-~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (553)
.+||++|.+.++++++.+++++++||||+|+..+++.+ ++.+.+.+......... .++.+.... +
T Consensus 198 ~~~~~WR~~~~~~~ip~~i~~~~~~~lpESpr~l~~~~~~~~~a~~~~~~~~~~~~~~~-~~~~~~~~~----~------ 266 (502)
T TIGR00887 198 AVDYMWRILIGFGAVPALLALYFRLTIPETPRYTADVAKDVEQAASDMSAVLQVKIEAE-PDEVEKAST----A------ 266 (502)
T ss_pred hhcccHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHhCcchHHHHHHHHHHhccccccC-cccccchhc----c------
Confidence 26999999999999888888888999999998887764 46666665543211111 011100000 0
Q ss_pred CCCCCChhhhhhhhhcc---hhHHHHHHHHHHHHhhhhhHHHHhhHHHHHHhhCCCCChH-------------HHHHHHH
Q psy15864 217 KDGQRRPNYRMYMRRTF---LLPYAIVTSLFFIGQFGGMTTLQTYAVGIFESIHAPLDPY-------------FATLLLG 280 (553)
Q Consensus 217 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-------------~~~~~~~ 280 (553)
.. .....++.++++.. ..+..+...+.++.....++....|.|.++...|++.... ...++..
T Consensus 267 ~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~p~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (502)
T TIGR00887 267 VE-VPKASWSDFFTHFFKWRHGKHLLGTAGSWFLLDIAFYGVNLNQKVILSAIGYSPPAATNNAYEELYKTAVGNLIIAL 345 (502)
T ss_pred cc-chhhhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHcCCCCccchhHHHHHHHHHHHHHHHHH
Confidence 00 00123444443211 1122222222333333344556667888887777653210 1233344
Q ss_pred HHHHHHHHHHhhhhcccCCcceeecchhHHHHHHHHHHHHHHhhcccCCCCChhHHHHHHHHHHHHhhhhccccceeecc
Q psy15864 281 VAELGGALLCVVLIHYTGKRPLALISTGGSAACFIVVAVYAQFHLSYGWDSPLVPTVFLVLAAFLTHICIRLLPWMLIGE 360 (553)
Q Consensus 281 i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e 360 (553)
++.+++.+++++++||+|||++++++.++++++++++++.... .... ...+..++..++.+.+..++.+++.+|
T Consensus 346 ~~~i~g~~~~~~l~dr~gRR~~l~~~~~~~~~~~~~l~~~~~~-----~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~E 419 (502)
T TIGR00887 346 AGTVPGYWVTVFLVDIIGRKPIQLMGFFILTVLFFVLGFAYNH-----LSTH-GFLAIYVLAQFFANFGPNATTFIVPGE 419 (502)
T ss_pred HHHHHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHHh-----cchh-HHHHHHHHHHHHHhcCCCchhhhhhhc
Confidence 5677788999999999999999888877777666655543210 0111 112222222233345556667788999
Q ss_pred ccccchhhhhhhHHHHHHHHHHHHHHHHhHHHHhhc----------cchhhHHHHHHHHHHHHhhheEEcccCCCCChHH
Q psy15864 361 VFPNNIRATASGASGSSSYIFAFAVNKLYYPMLDTF----------HLWGTLYFYAAISVVGTLYMYFVMPETEGRTLRD 430 (553)
Q Consensus 361 ~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~~~----------g~~~~~~~~~~~~~~~~~~~~~~~pet~~~~~~~ 430 (553)
++|++.|+++.|+.+.++++++++++.+++++.+.. +....++++++++++..++ ++++|||++++++|
T Consensus 420 ~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~-~~~lpEt~~~~lee 498 (502)
T TIGR00887 420 VFPTRYRSTAHGISAASGKAGAIIGQFGFLYLAQHGDPTKGYPTGIWMGHVLEIFALFMFLGILF-TLLIPETKGKSLEE 498 (502)
T ss_pred cCchhHHHHHHHHHHHHhhhHHHHHHHHhhhhhccccccccccccccchHHHHHHHHHHHHHHHH-heEeccCCCCCHHh
Confidence 999999999999999999999999999999988742 3334566677766666554 46789999999887
Q ss_pred HH
Q psy15864 431 IE 432 (553)
Q Consensus 431 ~~ 432 (553)
++
T Consensus 499 i~ 500 (502)
T TIGR00887 499 LS 500 (502)
T ss_pred hh
Confidence 65
No 4
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.96 E-value=1.1e-28 Score=263.31 Aligned_cols=328 Identities=20% Similarity=0.206 Sum_probs=226.3
Q ss_pred cccccccccccc--chhhhhhhhhccCcccccchhchhhhhHHHHHHHHHhhccc-----------------cchHHHHH
Q psy15864 88 EKGTFLYKMAAP--LVLVLTYVAEITQPHLRGMLSATASMTTIFGTVSQLFLGSF-----------------LHWRSAAI 148 (553)
Q Consensus 88 ~~gr~~~G~ga~--~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~lG~~l~~~l~~~-----------------lgWr~~f~ 148 (553)
--.|+++|++.+ .++++++++|++|++.||+.++++.+++.+|.+++++++.. .+||++|+
T Consensus 259 lv~R~l~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~il~~~G~~~~~g~~~~~~gWR~l~~ 338 (742)
T TIGR01299 259 LFCRLLSGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAIIPHYGWSFQMGSAYQFHSWRVFVI 338 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhccccccccccHHHHHH
Confidence 346778787653 56778999999999999999999999999999888764321 16999999
Q ss_pred HHHHHHHHHHHHhccccCCceeeeecCChHHHHHHHHHHcCCCCCcc--hHH--HHHHHHHHHHHHHH-HhcCCCC----
Q psy15864 149 LNLLFPILALCALYFIPESPHWLISQGRMQEASASLCWLRGWVTPDK--VQT--ELSQITKAIEESEL-KRLGKDG---- 219 (553)
Q Consensus 149 i~~i~~li~~i~~~~lpEsp~~l~~~~~~~~a~~~l~~~~~~~~~~~--~~~--~~~~~~~~~~~~~~-~~~~~~~---- 219 (553)
+.++++++++++++++||||+|+..+++.+++.+.+++++..+.... ... ....+......... .......
T Consensus 339 i~~lp~ll~ll~~~~lPESPrwL~~~gr~~eA~~iL~~i~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 418 (742)
T TIGR01299 339 VCAFPCVFAIGALTFMPESPRFFLENGKHDEAWMILKLIHDTNMRAKGHPEKVFSVNHIKTIHQEDELIEIESDTGTWYQ 418 (742)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHHHCCCHHHHHHHHHHHhcCCCCCcCchhHHHHHHHHHHhhhhhhhhcccccccchhh
Confidence 99998888888888899999999999999999999999887653211 111 11111110000000 0000000
Q ss_pred -----------CCChhhhhhhhhcchhHHHHHHHHHHHHhhhhhHHHHhhHHHHHHhh----------------------
Q psy15864 220 -----------QRRPNYRMYMRRTFLLPYAIVTSLFFIGQFGGMTTLQTYAVGIFESI---------------------- 266 (553)
Q Consensus 220 -----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------- 266 (553)
.....+..+++++++++.++++++ +++...+++.+..|+|.++...
T Consensus 419 ~~~~~~~~~~~~~~~~~~~lf~~~~~~~tl~l~~~-wf~~~~~yygl~~w~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 497 (742)
T TIGR01299 419 RCFVRALSEGGGIWGNFLRCFNPEVREITIKLMGV-WFTLSFGYYGLSVWFPDMIKHLQADDYAALTKNFPGDKVAHFSF 497 (742)
T ss_pred cchhhhhhhhhhHHHHHHHHcCccHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccchhcccc
Confidence 000124446666666666555554 5556667888899999875331
Q ss_pred --------------------CC-----C----------------------------------------------------
Q psy15864 267 --------------------HA-----P---------------------------------------------------- 269 (553)
Q Consensus 267 --------------------g~-----~---------------------------------------------------- 269 (553)
|+ .
T Consensus 498 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 577 (742)
T TIGR01299 498 NFTLENQIHRGGEYDNDKFIGLKFKSVSFEDSLFEECTFDDVTSSNTFFKNCTFIDTLFENTDFEEYKFIDSEFQNCSFL 577 (742)
T ss_pred ccchhhhhccccccccchhhcccccccccccccccccceeeccccchhhhccchhhhhccccchhhhhhhhhhhhhcccc
Confidence 00 0
Q ss_pred ------------C-----ChHHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHHHHHHHHHhhcccCCCCC
Q psy15864 270 ------------L-----DPYFATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAACFIVVAVYAQFHLSYGWDSP 332 (553)
Q Consensus 270 ------------~-----~~~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 332 (553)
. ..++..++.+++.++|.+++|+++||+|||+++++++++.+++++++++ ..+.
T Consensus 578 ~~~~~c~~~~~~~~~~~~~~~~~~~l~~l~~i~G~il~g~L~Dr~GRr~~l~~~~~lsai~~ll~~~---------~~s~ 648 (742)
T TIGR01299 578 HNKEGCPIDFDGDDEGAYMIYFVNFLGTLAVLPGNIVSALLMDKIGRLRMLAGSMVLSCISCFFLSF---------GNSE 648 (742)
T ss_pred ccCCccCccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHH---------HccH
Confidence 0 0123344566889999999999999999999998888888888777665 3334
Q ss_pred hhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhHHHHhhccchhhHHHHHHHHHHH
Q psy15864 333 LVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYYPMLDTFHLWGTLYFYAAISVVG 412 (553)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 412 (553)
..+++++++++++.+..+. +.+++++|++|++.|++++|+.+.++.+|++++|++++.+... +...++++++++.+++
T Consensus 649 ~~ll~~~~l~g~~~~~~~~-~~~a~~aEl~Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~-~~~~pf~i~a~~lll~ 726 (742)
T TIGR01299 649 SAMIALLCLFGGLSIAAWN-ALDVLTVELYPSDKRATAFGFLNALCKAAAVLGILIFGSFVGI-TKAAPILFASAALACG 726 (742)
T ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHH
Confidence 4455555666666555554 4469999999999999999999999999999999999887764 3344555555555554
Q ss_pred HhhheEEcccCCCCCh
Q psy15864 413 TLYMYFVMPETEGRTL 428 (553)
Q Consensus 413 ~~~~~~~~pet~~~~~ 428 (553)
+++. +++|||+++.+
T Consensus 727 ~ll~-~~LPET~~~~l 741 (742)
T TIGR01299 727 GLLA-LKLPDTRGQVL 741 (742)
T ss_pred HHHH-HhCCCCccccc
Confidence 4444 46699988753
No 5
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.95 E-value=1.4e-26 Score=242.66 Aligned_cols=329 Identities=24% Similarity=0.389 Sum_probs=228.1
Q ss_pred ccccccccccc--chhhhhhhhhccCcccccchhchhhhhHHHHHHHHHhhcc------------ccchHHHHHHHHHHH
Q psy15864 89 KGTFLYKMAAP--LVLVLTYVAEITQPHLRGMLSATASMTTIFGTVSQLFLGS------------FLHWRSAAILNLLFP 154 (553)
Q Consensus 89 ~gr~~~G~ga~--~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~lG~~l~~~l~~------------~lgWr~~f~i~~i~~ 154 (553)
-+|+++|++.+ .+.+.++++|++|+++||+++++.+.+..+|.+++++++. ..+||++|++.++++
T Consensus 125 ~~R~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~ 204 (479)
T PRK10077 125 IYRIIGGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLNTDGWRYMFASEAIPA 204 (479)
T ss_pred HHHHHHhhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccCChHHHHHHHHHHH
Confidence 67999999765 5678899999999999999999999999999998876543 238999999998888
Q ss_pred HHHHHHhccccCCceeeeecCChHHHHHHHHHHcCCCCCcchHHHHHHHHHHHHHHHHHhcCCCCCCChhhhhhhhhcch
Q psy15864 155 ILALCALYFIPESPHWLISQGRMQEASASLCWLRGWVTPDKVQTELSQITKAIEESELKRLGKDGQRRPNYRMYMRRTFL 234 (553)
Q Consensus 155 li~~i~~~~lpEsp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (553)
++.++..+++||+|+|+..+++.+++...++++..... .....++.......... .. ...+. ...
T Consensus 205 ~~~~~~~~~l~~s~~~l~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~----------~~-~~~~~-~~~ 269 (479)
T PRK10077 205 LLFLMLLYFVPETPRYLMSRGKQEQAEGILRKIMGNTL---ATQALQEIKHSLDHGRK----------TG-GKLLM-FGV 269 (479)
T ss_pred HHHHHHHHcCCCCcHHHHHcCCHHHHHHHHHHHcCChh---HHHHHHHHHHHHHHhhh----------hh-hhhcc-hhH
Confidence 88877777899999988777777777766665543211 11111222111110000 00 00000 001
Q ss_pred hHHHHHHHHHHHHhhhhhHHHHhhHHHHHHhhCCCCCh-HHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHH
Q psy15864 235 LPYAIVTSLFFIGQFGGMTTLQTYAVGIFESIHAPLDP-YFATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAAC 313 (553)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~ 313 (553)
...++.+....+....+++...+|.|.++...|.+... .+..++.+++.+++.+++++++||+|||++++.+.++++++
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~ 349 (479)
T PRK10077 270 GVIVIGVMLSVFQQFVGINVVLYYAPEIFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIG 349 (479)
T ss_pred HHHHHHHHHHHHHHHhChhHHHHHHHHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHHH
Confidence 11122222333444455666677888888877776543 45556677888999999999999999999999988888887
Q ss_pred HHHHHHHHHhhcccCCCCChhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhHHHH
Q psy15864 314 FIVVAVYAQFHLSYGWDSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYYPML 393 (553)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~ 393 (553)
.+++...... ........+..++++++.+..+.++.+++++|.+|++.|++++|+.+.+.++++++++.+++.+.
T Consensus 350 ~~~l~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~ 424 (479)
T PRK10077 350 MFSLGTAFYT-----QAPGIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMD 424 (479)
T ss_pred HHHHHHHHhc-----CcccHHHHHHHHHHHHHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHH
Confidence 7766543210 11122233344444444444555666799999999999999999999999999999887776544
Q ss_pred ------hhccchhhHHHHHHHHHHHHhhheEEcccCCCCChHHHHHHHhc
Q psy15864 394 ------DTFHLWGTLYFYAAISVVGTLYMYFVMPETEGRTLRDIEEHFAD 437 (553)
Q Consensus 394 ------~~~g~~~~~~~~~~~~~~~~~~~~~~~pet~~~~~~~~~~~~~~ 437 (553)
+..+++..+.++++++++++++.+++.||+++++.++.+.++..
T Consensus 425 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~ 474 (479)
T PRK10077 425 KNSWLVAHFHNGFSYWIYGCMGVLAALFMWKFVPETKGKTLEEMEALWEP 474 (479)
T ss_pred hccchhhhccCccHHHHHHHHHHHHHHHHHhccccCCCCCHHHHHHHHhh
Confidence 45666667777777777777777788999999998887776644
No 6
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.95 E-value=9.7e-32 Score=279.40 Aligned_cols=341 Identities=29% Similarity=0.507 Sum_probs=252.5
Q ss_pred CCCcccccccccccccc--chhhhhhhhhccCcccccchhchhhhhHHHHHHHHHhhcccc----c---hHHHHHHHHHH
Q psy15864 83 NNNNEEKGTFLYKMAAP--LVLVLTYVAEITQPHLRGMLSATASMTTIFGTVSQLFLGSFL----H---WRSAAILNLLF 153 (553)
Q Consensus 83 ~~~~~~~gr~~~G~ga~--~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~lG~~l~~~l~~~l----g---Wr~~f~i~~i~ 153 (553)
+.-----+|+++|++.+ .++++.|+.|..|++.||+..++.++++.+|.+++.+++..+ + ||+.+++.+++
T Consensus 101 ~~~~~~~~R~~~G~~~g~~~~~~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~~~~~~~ 180 (451)
T PF00083_consen 101 NFWMLLIGRFLIGFGIGGAYVVSPIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYYSDNWGWRILLIFGAIP 180 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 34456789999999865 668889999999999999999999999999999988876644 4 99999999999
Q ss_pred HHHHHHHhccccCCceeeeecCChHHHHHHHHHHcCCCCCcchHHHHHHHHHHHHHHHHHhcCCCCCCChhhhhhhhhc-
Q psy15864 154 PILALCALYFIPESPHWLISQGRMQEASASLCWLRGWVTPDKVQTELSQITKAIEESELKRLGKDGQRRPNYRMYMRRT- 232 (553)
Q Consensus 154 ~li~~i~~~~lpEsp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 232 (553)
+++.++..+++||||+|+..+++.++|++.++++++..... .+.++...... ........+..+++.+
T Consensus 181 ~l~~~~~~~~~pESP~wL~~~~~~~~A~~~l~~~~~~~~~~---~~~~~~~~~~~--------~~~~~~~~~~~l~~~~~ 249 (451)
T PF00083_consen 181 SLLVLLLRFFLPESPRWLLSKGRDEEAEKVLRKLRGKEIED---EEIEEIKAEKK--------ESQESKASWRDLFRNKK 249 (451)
T ss_pred cccccccccccccccceeccccccccccccccccccccccc---ccccccccccc--------cccccceeeeecccccc
Confidence 99888888889999999999999999999988865432111 11111111100 0000013344444443
Q ss_pred chhHHHHHHHHHHHHhhhhhHHHHhhHHHHHHhhCCCCChHHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHH
Q psy15864 233 FLLPYAIVTSLFFIGQFGGMTTLQTYAVGIFESIHAPLDPYFATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAA 312 (553)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i 312 (553)
.+++.++.+.+..+..+.++....+|.+.++...+.+.. .....+.++..+++.+++.++.||+|||++++++.+++++
T Consensus 250 ~~~~~~~~~~l~~~~~~~g~~~~~~~~~~i~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~GRr~~~i~~~~~~~~ 328 (451)
T PF00083_consen 250 YRKRLLIALLLQFFQQFSGINFIFYYSPSIFENAGISNS-FLATLILGLVNFLGTLLAIFLIDRFGRRKLLIIGLLLMAI 328 (451)
T ss_pred ccccccccccccccccccccccccccccccccccccccc-cccccccccccccccccccccccccccccccccccccccc
Confidence 355566666666677677777788888888877776555 4445566677788888889999999999999999888887
Q ss_pred HHHHHHHHHHhhcccCCCCChhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhHHH
Q psy15864 313 CFIVVAVYAQFHLSYGWDSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYYPM 392 (553)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~ 392 (553)
+.+.++.........+.......+++..+...+++.+++++++.+++|++|++.|+++.++...++++++++++.+.+++
T Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~~~~~ 408 (451)
T PF00083_consen 329 CSLILGIIFFLGVSSSSWWSILSIVFLALFFAFFSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFIIPFLFPYL 408 (451)
T ss_pred cccccccccccccccccccccccceeeeeccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 77766511111000000012333334444444556677788889999999999999999999999999999999988888
Q ss_pred HhhccchhhHHHHHHHHHHHHhhheEEcccCCCCChHHHHHHH
Q psy15864 393 LDTFHLWGTLYFYAAISVVGTLYMYFVMPETEGRTLRDIEEHF 435 (553)
Q Consensus 393 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~pet~~~~~~~~~~~~ 435 (553)
.+..+.+..+.++++++++..++.++++|||++++++|+++++
T Consensus 409 ~~~~~~~~~~~i~~~~~~i~~i~~~~~lpET~g~~l~ei~~~f 451 (451)
T PF00083_consen 409 FNNLGGWGVFLIFAGVCLIAIIFVYFFLPETKGKTLEEIQEMF 451 (451)
T ss_pred cccccccccchhhHHHHHHHHhheeEEEeeCCCCCHHHHHhhC
Confidence 8777656778888888888889999999999999999988753
No 7
>KOG0253|consensus
Probab=99.95 E-value=2.8e-26 Score=213.82 Aligned_cols=317 Identities=17% Similarity=0.192 Sum_probs=229.0
Q ss_pred ccccccchhhhhhhhhccCcccccchhchhhhhHHHHHHHHHhhcccc----chHHHHHHHHHHHHHHHHHhccccCCce
Q psy15864 94 YKMAAPLVLVLTYVAEITQPHLRGMLSATASMTTIFGTVSQLFLGSFL----HWRSAAILNLLFPILALCALYFIPESPH 169 (553)
Q Consensus 94 ~G~ga~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~lG~~l~~~l~~~l----gWr~~f~i~~i~~li~~i~~~~lpEsp~ 169 (553)
+|+|+ .+...++-.|..|..+|+..+-.. ..+.+|.+....++... ||||..++.+.+..+.+.+.+++|||||
T Consensus 178 ~g~gg-~pv~~~~yle~lp~~~r~~~~V~~-~~waig~v~ea~law~vm~~~gwr~~l~~~~~pl~~~a~f~~w~~ESpR 255 (528)
T KOG0253|consen 178 FGVGG-LPVDSAIYLEFLPSSHRWLLTVMS-FFWAIGQVFEALLAWGVMSNFGWRYLLFTSSTPLMFAARFLVWVYESPR 255 (528)
T ss_pred ccCCC-ccHhHHHHHHhccCcCCCcchhHH-HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhHHHHHHHHHhhcccCcc
Confidence 34444 677778889999999999888777 88899988887776554 9999999999888888888899999999
Q ss_pred eeeecCChHHHHHHHHHHcCCCCCcch--------HHHHHHHHHHHHHHHHHhcCCCCCCChhhhhhhhhcchhHHHHHH
Q psy15864 170 WLISQGRMQEASASLCWLRGWVTPDKV--------QTELSQITKAIEESELKRLGKDGQRRPNYRMYMRRTFLLPYAIVT 241 (553)
Q Consensus 170 ~l~~~~~~~~a~~~l~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (553)
|+..+++.++|.+.+.++.+.|..+-. ..+.++....+.+. ......+.+.....++.+.+++..++..
T Consensus 256 f~~~~G~~~kAletL~kiArmNg~qlplgvl~~s~~~~~e~e~~~~~~~---~~~a~ke~rg~~~nLlsp~lrkttlllw 332 (528)
T KOG0253|consen 256 FYLAKGDDYKALETLHKIARMNGKQLPLGVLESSAIDRQEQEESDLDDS---KSSAAKEVRGGTTNLLSPKLRKTTLLLW 332 (528)
T ss_pred hhhhcCChHHHHHHHHHHHHhcCCCCCcceeeeehhhhhhhhhhchhhh---hhccccccccchHhhcChHHHHHHHHHH
Confidence 999999999999999988876653311 11111111111111 1112233445566777777777776665
Q ss_pred HHHHHHhhhhhHHHHhhHHHHHHhhC---------------------CCCChHHHHHHHHHHHHHHHHHHhhhhcccCCc
Q psy15864 242 SLFFIGQFGGMTTLQTYAVGIFESIH---------------------APLDPYFATLLLGVAELGGALLCVVLIHYTGKR 300 (553)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~g---------------------~~~~~~~~~~~~~i~~~~g~~~~g~l~dr~Grr 300 (553)
.+++. ....++........+++... .....+.-.++..+..+.|.++.+++.||+|||
T Consensus 333 ~iwfg-nafsyyg~VLlttelfqsgd~c~~~~r~~p~e~e~~~~c~~s~~~dYrdllitslaefPGlLIt~~iverlGRK 411 (528)
T KOG0253|consen 333 RIWFG-NAFSYYGSVLLTTELFQSGDACPLYNRFLPTELETRANCPLSVAKDYRDLLITSLAEFPGLLITGVIVERLGRK 411 (528)
T ss_pred HHHHh-hHHHHHHHHHHHHHHHhccCccccchhcchhHHHhhhcCCccchhHHHHHHHHHHhhCCchhHHHHHHHHhcch
Confidence 55443 33334444444444443321 011223456778899999999999999999999
Q ss_pred ceeecchhHHHHHHHHHHHHHHhhcccCCCCChhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHH
Q psy15864 301 PLALISTGGSAACFIVVAVYAQFHLSYGWDSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYI 380 (553)
Q Consensus 301 ~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~ 380 (553)
+++..++++++++.+++.. ........+..+...++..+++... |+|..|++|+..|++++|.+..+..+
T Consensus 412 kTMal~l~~f~iflfll~~---------c~~rn~~tvllf~arafisg~fqva-YvYtPEVyPTavRatgvGtcSsmaRI 481 (528)
T KOG0253|consen 412 KTMALSLILFGIFLFLLTT---------CKTRNAYTVLLFTARAFISGAFQVA-YVYTPEVYPTAVRATGVGTCSSMARI 481 (528)
T ss_pred hHHHHHHHHHHHHHHHHHH---------hcCcchhHHHHHHHHHHHhchheEE-EEecCcccchhhhhcchhhhhhHHhh
Confidence 9999999888888877766 3344444555566666666666555 79999999999999999999999999
Q ss_pred HHHHHHHHhHHHHhhccchhhHHHHHHHHHHHHhhheEEcccCCCCCh
Q psy15864 381 FAFAVNKLYYPMLDTFHLWGTLYFYAAISVVGTLYMYFVMPETEGRTL 428 (553)
Q Consensus 381 ~~~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~pet~~~~~ 428 (553)
|+++.|.+. +........+.+++.+++++..+...++--||+||.+
T Consensus 482 ggI~~p~iA--~~~e~s~sl~i~vy~~~~ilagIavcffPiEtkGR~l 527 (528)
T KOG0253|consen 482 GGIFSPVIA--MRAELSTSLPIFVYGALFILAGIAVCFFPIETKGRSL 527 (528)
T ss_pred hhhhhhHHH--HHhccceeehHHHHHHHHHHHHHHheeeeeccCCCCC
Confidence 999999877 4444445667778888888888888777779999864
No 8
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.94 E-value=2.2e-25 Score=233.38 Aligned_cols=297 Identities=15% Similarity=0.143 Sum_probs=186.3
Q ss_pred ccccccccccc--chhhhhhhhhccCcccccchhchhhhhHHHHHHHHHhhc----c--------ccchHHHHHHHHHHH
Q psy15864 89 KGTFLYKMAAP--LVLVLTYVAEITQPHLRGMLSATASMTTIFGTVSQLFLG----S--------FLHWRSAAILNLLFP 154 (553)
Q Consensus 89 ~gr~~~G~ga~--~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~lG~~l~~~l~----~--------~lgWr~~f~i~~i~~ 154 (553)
-.|+++|++.+ .+.+.++++|++|+++||++.++..++..+|.++++.+. . ..|||++|++.++++
T Consensus 123 ~~R~l~G~g~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~G~~lg~~~~~~~~~~~~~~~~~~~gWR~~f~i~~~~~ 202 (490)
T PRK10642 123 LCKMAQGFSVGGEYTGASIFVAEYSPDRKRGFMGSWLDFGSIAGFVLGAGVVVLISTIVGEANFLDWGWRIPFFIALPLG 202 (490)
T ss_pred HHHHHHHhHhHhhHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhcCccHHHHHHHHHHHH
Confidence 46899998754 567889999999999999999999988888887776432 1 238999999988777
Q ss_pred HHHHHHhccccCCceeeeecCChHHHHHHHHHHcCCCCCcchHHHHHHHHHHHHHHHHHhcCCCCCCChhhhhhhhhcch
Q psy15864 155 ILALCALYFIPESPHWLISQGRMQEASASLCWLRGWVTPDKVQTELSQITKAIEESELKRLGKDGQRRPNYRMYMRRTFL 234 (553)
Q Consensus 155 li~~i~~~~lpEsp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (553)
+++++++.++||+|+|...+++.++.. . . .........+..++++ .+
T Consensus 203 l~~~~~~~~~~esp~~~~~~~~~~~~~-------~----~---------------------~~~~~~~~~~~~~~~~-~~ 249 (490)
T PRK10642 203 IIGLYLRHALEETPAFQQHVDKLEQGD-------R----E---------------------GLQDGPKVSFKEIATK-HW 249 (490)
T ss_pred HHHHHHHHcCCCChhHHHHHHhhhhhc-------c----c---------------------cccccccCCHHHHHHH-hH
Confidence 776666677999998642111100000 0 0 0000001123333332 12
Q ss_pred hHHHHHHHHHHHHhhhhhHHHHhhHHHHHHh-hCCCCCh-HHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHH
Q psy15864 235 LPYAIVTSLFFIGQFGGMTTLQTYAVGIFES-IHAPLDP-YFATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAA 312 (553)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~-~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i 312 (553)
+..++.. ...+.....++.+..|+|.++.. .+++... .+..+...++.+++.+++|+++||+|||+.++++.++.++
T Consensus 250 ~~~~~~~-~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~ 328 (490)
T PRK10642 250 RSLLTCI-GLVIATNVTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFV 328 (490)
T ss_pred HHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 2222222 22233334556666788888753 4655433 3445566788889999999999999999987776654443
Q ss_pred HHHHHHHHHHhhcccCCCCChhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhHHH
Q psy15864 313 CFIVVAVYAQFHLSYGWDSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYYPM 392 (553)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~ 392 (553)
+.+.+..... ..+...+++++++.+++.+...+... .++.|++|++.|++++|+.+.++.+++.++|.+.+++
T Consensus 329 ~~~~~~~~~~------~~~~~~~~~~~~~~g~~~~~~~g~~~-~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l 401 (490)
T PRK10642 329 LAIPAFILIN------SNVIGLIFAGLLMLAVILNCFTGVMA-STLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWL 401 (490)
T ss_pred HHHHHHHHHh------CCCHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3332221111 23344455556666665554544443 7778999999999999987777888889999999988
Q ss_pred HhhccchhhHHHHHHHHHHHHhhheEEcccCCCC
Q psy15864 393 LDTFHLWGTLYFYAAISVVGTLYMYFVMPETEGR 426 (553)
Q Consensus 393 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~pet~~~ 426 (553)
.+..+.+.....+..++.++.++..+++|||+++
T Consensus 402 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~pes~~~ 435 (490)
T PRK10642 402 VESTQNLMMPAYYLMVVAVIGLITGVTMKETANR 435 (490)
T ss_pred HHHhCCchHHHHHHHHHHHHHHHHHHHhccccCC
Confidence 8765533333323333334444444567998554
No 9
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.93 E-value=2.2e-24 Score=225.79 Aligned_cols=336 Identities=28% Similarity=0.518 Sum_probs=229.4
Q ss_pred ccccccccccccc--chhhhhhhhhccCcccccchhchhhhhHHHHHHHHHhhc---cc----cchHHHHHHHHHHHHHH
Q psy15864 87 EEKGTFLYKMAAP--LVLVLTYVAEITQPHLRGMLSATASMTTIFGTVSQLFLG---SF----LHWRSAAILNLLFPILA 157 (553)
Q Consensus 87 ~~~gr~~~G~ga~--~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~lG~~l~~~l~---~~----lgWr~~f~i~~i~~li~ 157 (553)
---+|+++|++.+ .+...++++|++|+++|+++++++.++..+|.+++++++ .. .+||++|++.++.+++.
T Consensus 130 ~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~w~~~f~~~~~~~~~~ 209 (481)
T TIGR00879 130 LIVGRVLLGIGVGIASALVPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFGSGKVSLNNTLGWRIPLGLQLIPAGLL 209 (481)
T ss_pred HHHHHHHHHhhhhHHHhHHHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHH
Confidence 4457899998765 345678999999999999999999999999999999988 43 29999999987777777
Q ss_pred HHHhccccCCceeeeecCChHHHHHHHHHHcCCCCCcchH-HHHHHHHHHHHHHHHHhcCCCCCCChhhhhhhhhc--ch
Q psy15864 158 LCALYFIPESPHWLISQGRMQEASASLCWLRGWVTPDKVQ-TELSQITKAIEESELKRLGKDGQRRPNYRMYMRRT--FL 234 (553)
Q Consensus 158 ~i~~~~lpEsp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 234 (553)
++..+++||+|+++..+++.+++.+............... ......... ..... .... ..+..++... ..
T Consensus 210 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-~~~~---~~~~~~~~~~~~~~ 282 (481)
T TIGR00879 210 FLGLFFLPESPRWLVGKGRVEEARKSLARLRGTSGEDKELLDELELIDIK---RSIEK-RSVQ---PSWGSLFSSTRRIR 282 (481)
T ss_pred HHHHhcCCCChHHHHHcCChHHHHHHHHHHhCCCCCcHHHHHHHHHHHHH---HHHHH-hhcc---ccHHHHHhcCchhH
Confidence 7777789999988766666665555554443322211111 110100000 00000 0000 1122222211 23
Q ss_pred hHHHHHHHHHHHHhhhhhHHHHhhHHHHHHhhCCCCCh-HHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHH
Q psy15864 235 LPYAIVTSLFFIGQFGGMTTLQTYAVGIFESIHAPLDP-YFATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAAC 313 (553)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~ 313 (553)
.+.++..++.++........+.++.|.++...|++... .+...+..++.+++.+++|+++||+|||+.+.+++++++++
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~ 362 (481)
T TIGR00879 283 RRLFLGVVLQWFQQFTGINAIMYYSPTIFENAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAIC 362 (481)
T ss_pred HHHHHHHHHHHHHHHhCCeehHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHH
Confidence 44455555555555555666777888888877776543 35666778889999999999999999999988887777777
Q ss_pred HHHHHHHHHhhcccC-CCCChhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhHHH
Q psy15864 314 FIVVAVYAQFHLSYG-WDSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYYPM 392 (553)
Q Consensus 314 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~ 392 (553)
.+++.+......... ....+..++..+++..+.+.+..++..++++|.+|++.|+++.++.+...++++++++.+.+.+
T Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~ 442 (481)
T TIGR00879 363 LFVLGILGASFVTGSSKSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTM 442 (481)
T ss_pred HHHHHHHhhcccCCcccchhHHHHHHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 666653221100000 0012333344444555555666677778889999999999999999999999999999999999
Q ss_pred HhhccchhhHHHHHHHHHHHHhhheEEcccCCCCChH
Q psy15864 393 LDTFHLWGTLYFYAAISVVGTLYMYFVMPETEGRTLR 429 (553)
Q Consensus 393 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~pet~~~~~~ 429 (553)
.+..++...++++++++++.+++.+++.||+++++.+
T Consensus 443 ~~~~~~~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~ 479 (481)
T TIGR00879 443 LESIGVGGVFIFFGGLNVLGLIFVYFFLPETKGRTLE 479 (481)
T ss_pred HHhcCccceehhHHHHHHHHHHHHheecccCCCCChh
Confidence 8888877778888888888888888888998876654
No 10
>TIGR00898 2A0119 cation transport protein.
Probab=99.93 E-value=5.5e-25 Score=232.05 Aligned_cols=314 Identities=19% Similarity=0.288 Sum_probs=209.1
Q ss_pred ccccccccc--chhhhhhhhhccCcccccchhchhhhhHHHHHHHHHhhcccc-chHHHHHHHHHHHHHHHHHhccccCC
Q psy15864 91 TFLYKMAAP--LVLVLTYVAEITQPHLRGMLSATASMTTIFGTVSQLFLGSFL-HWRSAAILNLLFPILALCALYFIPES 167 (553)
Q Consensus 91 r~~~G~ga~--~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~lG~~l~~~l~~~l-gWr~~f~i~~i~~li~~i~~~~lpEs 167 (553)
|++.|++.+ .++..+++.|++|+++|+.+.+++.+++.+|.+++++++..+ +||+.|++.++++++.+++.+++||+
T Consensus 187 r~l~G~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~wr~~~~~~~i~~~~~~~~~~~~~es 266 (505)
T TIGR00898 187 RLLVGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIPDWRWLQLAVSLPTFLFFLLSWFVPES 266 (505)
T ss_pred HHHHHhhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 555555543 345568899999999999999999999999999999988776 89999999999988887777889999
Q ss_pred ceeeeecCChHHHHHHHHHHcCCCCCcchHHHHHHHHHHHHHHHHHhcCCCCCCChhhhhhhhhcchhHHHHHHHHHHHH
Q psy15864 168 PHWLISQGRMQEASASLCWLRGWVTPDKVQTELSQITKAIEESELKRLGKDGQRRPNYRMYMRRTFLLPYAIVTSLFFIG 247 (553)
Q Consensus 168 p~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (553)
|+|+..+++.+++.+.+++....+........... ...... . .......+..+++.+..+...+...+.++.
T Consensus 267 p~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~---~~~~~~-~----~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 338 (505)
T TIGR00898 267 PRWLISQGRIEEALKILQRIAKINGKKLPAEVLSL---SLEKDL-S----SSKKQYSFLDLFRTPNLRKTTLCLMMLWFT 338 (505)
T ss_pred hHHHHHCCCHHHHHHHHHHHHHHcCCCCCHHHHhh---hhhhhh-h----hccCCCcHHHHhCChHHHHHHHHHHHHHHH
Confidence 99999999999988887776544332211111100 000000 0 000112344455444444333333333333
Q ss_pred hhhhhHHHHhhHHHHHHhhCCCCChHHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHHHHHHHHHhhccc
Q psy15864 248 QFGGMTTLQTYAVGIFESIHAPLDPYFATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAACFIVVAVYAQFHLSY 327 (553)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~ 327 (553)
....++.+..+.+ ..+ .+.....++.+++.+++.+++++++||+|||+.+.+++++.+++.+++.+..
T Consensus 339 ~~~~~~~~~~~~~----~~~--~~~~~~~~~~~~~~i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~~------ 406 (505)
T TIGR00898 339 TAFSYYGLVLDLG----NLG--GNIYLDLFISGLVELPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLLFVP------ 406 (505)
T ss_pred HHHHHHHHhcccc----ccC--CChHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcC------
Confidence 3222222222222 122 2345556677888899999999999999999999888877777766655421
Q ss_pred CCCCChhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhHHHHhhccchhhHHHHHH
Q psy15864 328 GWDSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYYPMLDTFHLWGTLYFYAA 407 (553)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~ 407 (553)
....+..++..++.+++.+..+ ++.+++.+|++|++.|++++|+.+.++.++++++|++.+ + ...+....++++++
T Consensus 407 -~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~e~~p~~~r~~~~g~~~~~~~ig~~i~p~i~~-~-~~~~~~~~~~~~~~ 482 (505)
T TIGR00898 407 -VDLYFLRTALAVLGKFGITSAF-QMVYLYTAELYPTVVRNLGVGVCSTMARVGSIISPFLVY-L-GEKWLFLPLVLFGG 482 (505)
T ss_pred -CCchHHHHHHHHHHHHHHHHHH-HHHHHHhcccccHHHHhhhHhHHHHHHHHHHHHHhHHHH-H-HHHHHhhHHHHHHH
Confidence 1122334444444444444444 344589999999999999999999999999999998888 3 33444556666666
Q ss_pred HHHHHHhhheEEcccCCCCChH
Q psy15864 408 ISVVGTLYMYFVMPETEGRTLR 429 (553)
Q Consensus 408 ~~~~~~~~~~~~~pet~~~~~~ 429 (553)
+.++..++. +++|||++++++
T Consensus 483 ~~~~~~~~~-~~lpet~~~~l~ 503 (505)
T TIGR00898 483 LALLAGILT-LFLPETKGVPLP 503 (505)
T ss_pred HHHHHHHHH-HcCcCCCCCCCC
Confidence 655555544 578999988764
No 11
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.88 E-value=9e-23 Score=195.86 Aligned_cols=285 Identities=16% Similarity=0.152 Sum_probs=197.7
Q ss_pred hhhhhhhccCcccccchhchhhhhHHHHHHHHHhhc--ccc----chHHHHHHHHHHHHHHHH-HhccccCCceeeeecC
Q psy15864 103 VLTYVAEITQPHLRGMLSATASMTTIFGTVSQLFLG--SFL----HWRSAAILNLLFPILALC-ALYFIPESPHWLISQG 175 (553)
Q Consensus 103 ~~~~i~e~~p~~~Rg~~~~~~~~~~~lG~~l~~~l~--~~l----gWr~~f~i~~i~~li~~i-~~~~lpEsp~~l~~~~ 175 (553)
+...++.|+|+++||++.++++++.++|..+.+++. +.+ +||..|++.++++++..+ +++.++++|+-.- -.
T Consensus 138 ~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~~~~~w~~~f~~pgiiaiival~~~~~~rd~Pqs~G-LP 216 (448)
T COG2271 138 CARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFAFHGGWRAAFYFPGIIAIIVALILLFLLRDRPQSEG-LP 216 (448)
T ss_pred HHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhCCCccccC-CC
Confidence 337889999999999999999999999999988877 444 899999999999988754 4455888885210 00
Q ss_pred ChHHHHHHHHHHcCCCCCcchHHHHHHHHHHHHHHHHHhcCCCCCCChhhhhhhhhcchhHHHHHHHHHHHHhhhhhHHH
Q psy15864 176 RMQEASASLCWLRGWVTPDKVQTELSQITKAIEESELKRLGKDGQRRPNYRMYMRRTFLLPYAIVTSLFFIGQFGGMTTL 255 (553)
Q Consensus 176 ~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (553)
..++-+ .+-.+.. . +....+....+..+.+..+..+.+++.++..+..+..-+.+
T Consensus 217 ~ie~~~-------------------~d~~e~~-~-----~~~~~~~ls~~~i~~~YVL~Nk~iW~la~a~vfvYivR~gi 271 (448)
T COG2271 217 PIEEYR-------------------GDPLEIY-E-----EEKENEGLTAWQIFVKYVLKNKLIWLLALANVFVYVVRYGI 271 (448)
T ss_pred CHHHhh-------------------cCchhhh-h-----hhccCCCccHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHH
Confidence 111100 0000000 0 00111113455666777777788888888888888889999
Q ss_pred HhhHHHHHHh-hCCCC-ChHHHHHHHHHHHHHHHHHHhhhhccc--CCcceeecchhHHHHHHHHHHHHHHhhcccCCCC
Q psy15864 256 QTYAVGIFES-IHAPL-DPYFATLLLGVAELGGALLCVVLIHYT--GKRPLALISTGGSAACFIVVAVYAQFHLSYGWDS 331 (553)
Q Consensus 256 ~~~~~~~~~~-~g~~~-~~~~~~~~~~i~~~~g~~~~g~l~dr~--Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 331 (553)
..|.|.++.+ .+++. ++.+..+++-+++++|++++||++||+ |||....+.+.+....+++..... +..+
T Consensus 272 ~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~~i~~~~i~~~~~~~w~~------~~~~ 345 (448)
T COG2271 272 NDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMALIFMLLITASLVLYWLA------PNGS 345 (448)
T ss_pred hhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHcC------CCcc
Confidence 9999998855 56654 445778888899999999999999996 677665444333333333222211 1234
Q ss_pred ChhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHH-HHHHHHHHhHHHHhhccchhhHHHHHHHHH
Q psy15864 332 PLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYI-FAFAVNKLYYPMLDTFHLWGTLYFYAAISV 410 (553)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~-~~~i~~~~~~~~~~~~g~~~~~~~~~~~~~ 410 (553)
.++..++.++.|++..... .+.-....|+.|.+.-|++.|+...++++ |+..+....+++.+.+||...+.++.+.++
T Consensus 346 ~~l~~~~l~~iGf~IyGPq-mLiGl~a~e~~pK~AaGtA~Gf~Glf~Yl~Ga~~a~~~~g~i~d~~gW~g~Fi~~~~~a~ 424 (448)
T COG2271 346 YLLDAILLFIIGFLIYGPQ-MLIGLAAAEFVPKKAAGTATGFVGLFAYLIGAALAGLPLGYIADTWGWDGGFIVLSIAAL 424 (448)
T ss_pred HHHHHHHHHHHHHHHhhHH-HHHHHHHhccccHhhccchhchhhhHHHHhhHHhcCCcceeeEecCCCcchHHHHHHHHH
Confidence 4566666666666553333 33347788999999999999999999999 888888888888888888888877776666
Q ss_pred HHHhhheEEc
Q psy15864 411 VGTLYMYFVM 420 (553)
Q Consensus 411 ~~~~~~~~~~ 420 (553)
++.+++..+.
T Consensus 425 l~~lll~~~~ 434 (448)
T COG2271 425 LAILLLLPVW 434 (448)
T ss_pred HHHHHHHHHH
Confidence 6655554433
No 12
>KOG0252|consensus
Probab=99.88 E-value=5.8e-23 Score=197.93 Aligned_cols=322 Identities=17% Similarity=0.195 Sum_probs=223.2
Q ss_pred ccccccccc--ccchhhhhhhhhccCcccccchhchhhhhHHHHHHHHHhhcccc-------------------chHHHH
Q psy15864 89 KGTFLYKMA--APLVLVLTYVAEITQPHLRGMLSATASMTTIFGTVSQLFLGSFL-------------------HWRSAA 147 (553)
Q Consensus 89 ~gr~~~G~g--a~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~lG~~l~~~l~~~l-------------------gWr~~f 147 (553)
.=||++|+| +.+|++.++.+|.+..++||..++.+.+...+|.+.|.+++..+ -||..|
T Consensus 149 ~~R~~LGiGIGGDYPlSAtI~SE~an~~~RGa~iaavFa~Qg~GilaG~ivt~Iv~~~fe~~~~~~~~~~~ld~vWRl~~ 228 (538)
T KOG0252|consen 149 FFRFLLGIGIGGDYPLSATIMSESANKKTRGAFIAAVFAMQGFGILAGGIVALIVSAIFEKIFNGPSTYPHLDGVWRIIF 228 (538)
T ss_pred HHHHHhhccccCCCcchHHHhhhhhhhccccceeEEEEEecchhHhhccHHHHHHHHHHhccCCCCCCchHHHHHHHHHH
Confidence 347776665 56999999999999999999999999888888888777665433 399999
Q ss_pred HHHHHHHHHHHHHhccccCCceeeeecC-ChHHHHHHHHHHcCCCCCcchHHHHHHHHHHHHHHHHHhcCCCCCCC---h
Q psy15864 148 ILNLLFPILALCALYFIPESPHWLISQG-RMQEASASLCWLRGWVTPDKVQTELSQITKAIEESELKRLGKDGQRR---P 223 (553)
Q Consensus 148 ~i~~i~~li~~i~~~~lpEsp~~l~~~~-~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 223 (553)
.+.+++++++++.++.+|||++|-.... +.+++.....+. ... .+..+... ........ .
T Consensus 229 glg~vpa~~~ly~Rl~M~Et~~Y~al~~~~~~~a~~d~~k~---~~~------------~~~~~~~~-~~~~~~~~~~~~ 292 (538)
T KOG0252|consen 229 GLGAVPALLVLYFRLKMPETARYTALVSKKLKQAAGDMKKV---LSV------------DIEAESTA-ESDVPPPSNSFG 292 (538)
T ss_pred HHHHHHHHHHHHhhhcCCcchhHHHHhhcCHhhhhhccccc---ccc------------ccchhhcc-ccCCCCcccccc
Confidence 9999999999999999999998852221 222222111000 000 00000000 00011111 1
Q ss_pred hhhhhhhhcchhHHHHHHHHHHHHhhhhhHHHHhhHHHHHHhhCCCCChH----------HHHHHHHHHHHHHHHHHhhh
Q psy15864 224 NYRMYMRRTFLLPYAIVTSLFFIGQFGGMTTLQTYAVGIFESIHAPLDPY----------FATLLLGVAELGGALLCVVL 293 (553)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~----------~~~~~~~i~~~~g~~~~g~l 293 (553)
.+...+... .-..++..+..++..-..++....+...+++..+...... +..++..++.+.|.++..++
T Consensus 293 ~F~~~f~~~-hg~~Llgt~~~WFllDiafy~~nL~~s~I~~~ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~ 371 (538)
T KOG0252|consen 293 LFSRLFLRW-HGKHLLGTAGTWFLLDIAFYGQNLFQSVIFSAIGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYF 371 (538)
T ss_pred hHHHHHHHH-HHHHHHHHHHHHHhhhhhhhccccHHHHHHHhhccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEE
Confidence 122222222 2245566667777777788888888888888766532221 22333445556677788889
Q ss_pred hcccCCcceeecchhHHHHHHHHHHHHHHhhcccCCCCChhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhH
Q psy15864 294 IHYTGKRPLALISTGGSAACFIVVAVYAQFHLSYGWDSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGA 373 (553)
Q Consensus 294 ~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~ 373 (553)
+|++||+++.+.+++++.+..++++..... ..+...+++...+..++..++.....+++.+|++|++.||++.|+
T Consensus 372 id~iGRk~iq~~GF~~~~i~~~~~~~~y~~-----~~~~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FParvR~t~hGI 446 (538)
T KOG0252|consen 372 IDIIGRKYIQLMGFFIMTIFFFVIAGPYNQ-----LENTIGFVVLYSLTFFFGNFGPNATTFIVPAEIFPARVRSTCHGI 446 (538)
T ss_pred eehhhhHHHHHhhHHHHHHHHHHHcCCccc-----ccccCceeehHHHHHHHHhcCCCceeEEeehhhchHHHhhhhhhH
Confidence 999999999999999998888887763321 113334455555666666778888888999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhHHHHh-----hccchhhHHHHHHHHHHHHhhheEEcccCCCCChHHHHH
Q psy15864 374 SGSSSYIFAFAVNKLYYPMLD-----TFHLWGTLYFYAAISVVGTLYMYFVMPETEGRTLRDIEE 433 (553)
Q Consensus 374 ~~~~~~~~~~i~~~~~~~~~~-----~~g~~~~~~~~~~~~~~~~~~~~~~~pet~~~~~~~~~~ 433 (553)
..+.+.+|++++...+.++.+ ..+....++++++++.+..++. +++|||+++++++++.
T Consensus 447 sAA~GK~GAivg~~~F~~~t~~~yp~~~g~~~v~~i~~~~~~~gi~~T-~l~pEtk~~~leei~~ 510 (538)
T KOG0252|consen 447 SAASGKAGAIVGAFGFLYLTDHNYPPNIGVRNVFIILAGCMLLGILFT-LLIPETKGKSLEEISN 510 (538)
T ss_pred HHHhccchHHHHHHHhhHhhhccCCccccchHHHHHHHHHHHHhHhee-EEeecccccCHHHhcC
Confidence 999999999999999999888 5666777777777766665554 6678999999998743
No 13
>PRK09952 shikimate transporter; Provisional
Probab=99.87 E-value=3.6e-21 Score=198.60 Aligned_cols=289 Identities=12% Similarity=0.094 Sum_probs=173.5
Q ss_pred ccccccccccc--chhhhhhhhhccCcccccchhchhhhhHHHHHHHHHhhcc------------ccchHHHHHHHHHHH
Q psy15864 89 KGTFLYKMAAP--LVLVLTYVAEITQPHLRGMLSATASMTTIFGTVSQLFLGS------------FLHWRSAAILNLLFP 154 (553)
Q Consensus 89 ~gr~~~G~ga~--~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~lG~~l~~~l~~------------~lgWr~~f~i~~i~~ 154 (553)
-.|+++|++.+ .+.+.++++|++|+++||+.++....++.+|.+++..+.. ..|||++|++.+++.
T Consensus 130 ~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~g~~~G~~l~~~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~~ 209 (438)
T PRK09952 130 TLRAIQGFAVGGEWGGAALLAVESAPKNKKAFYSSGVQVGYGVGLLLSTGLVSLISMMTTDEQFLSWGWRIPFLFSIVLV 209 (438)
T ss_pred HHHHHHHhhhcccHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHhhccChHHHHHHHHHHH
Confidence 36999999765 4677899999999999999999999999999988865432 248999999998887
Q ss_pred HHHHHHhccccCCceeeeecCChHHHHHHHHHHcCCCCCcchHHHHHHHHHHHHHHHHHhcCCCCCCChhhhhhhhhcch
Q psy15864 155 ILALCALYFIPESPHWLISQGRMQEASASLCWLRGWVTPDKVQTELSQITKAIEESELKRLGKDGQRRPNYRMYMRRTFL 234 (553)
Q Consensus 155 li~~i~~~~lpEsp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (553)
++++++...+||+|+|...+.+.++. .......+.+.+.+
T Consensus 210 l~~~~l~~~~~es~~~~~~~~~~~~~--------------------------------------~~~~~~~~~l~~~~-- 249 (438)
T PRK09952 210 LIALWVRNGMEESAEFEQQQHEQAAA--------------------------------------KKRIPVIEALLRHP-- 249 (438)
T ss_pred HHHHHHHHhCCCChhHHHHHhhcccc--------------------------------------cccCCHHHHHHHch--
Confidence 76666666689998753211100000 00000111122111
Q ss_pred hHHHHHHHHHHHHhhhhhHHHHhhHHHHHH-hhCCCCChH-HHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHH
Q psy15864 235 LPYAIVTSLFFIGQFGGMTTLQTYAVGIFE-SIHAPLDPY-FATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAA 312 (553)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~-~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i 312 (553)
+.+.......+......+....|.|.++. ..+.+.... ....+.++..+++.++.|+++||+|||++++.++++.++
T Consensus 250 -~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~ 328 (438)
T PRK09952 250 -GAFLKIIALRLCELLTMYIVTAFALNYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTL 328 (438)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHH
Confidence 11122222222233334445556666654 345443322 334455677788889999999999999987776655544
Q ss_pred HHHHHHHHHHhhcccCCCCChhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHH-HHHHHHHHHhHH
Q psy15864 313 CFIVVAVYAQFHLSYGWDSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSY-IFAFAVNKLYYP 391 (553)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~-~~~~i~~~~~~~ 391 (553)
+.+.+..... .....+.+++..++.+++.+..... .+++++|.+|++.|+++.++.+.++. +++.++|.+.+.
T Consensus 329 ~~~~~~~~~~-----~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~ 402 (438)
T PRK09952 329 SAFPFFMALE-----AQSIFWIVFFSIMLANIAHDMVVCV-QQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAA 402 (438)
T ss_pred HHHHHHHHHH-----cCChHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHH
Confidence 4333322111 0112223233334444444444333 35888999999999999998776655 788999999999
Q ss_pred HHhhcc-chhhHHHHHHHHHHHHhhheEEcccCC
Q psy15864 392 MLDTFH-LWGTLYFYAAISVVGTLYMYFVMPETE 424 (553)
Q Consensus 392 ~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~pet~ 424 (553)
+.+..+ .|.....+.+++.++..+..+.++|++
T Consensus 403 l~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~~ 436 (438)
T PRK09952 403 LVTYFGGSWHSVAIYLLAGCLISAMTALLMKDNQ 436 (438)
T ss_pred HHHhcCCCchHHHHHHHHHHHHHHHHHHHccccc
Confidence 887543 233333333333344333334456643
No 14
>KOG0255|consensus
Probab=99.86 E-value=2.7e-20 Score=196.87 Aligned_cols=319 Identities=18% Similarity=0.201 Sum_probs=209.8
Q ss_pred ccccccccc--chhhhhhhhhccCcccccchhchhhhhHHHHHHHHHhhccc-c-chHHHHHHHHHHHHHHHHHhccccC
Q psy15864 91 TFLYKMAAP--LVLVLTYVAEITQPHLRGMLSATASMTTIFGTVSQLFLGSF-L-HWRSAAILNLLFPILALCALYFIPE 166 (553)
Q Consensus 91 r~~~G~ga~--~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~lG~~l~~~l~~~-l-gWr~~f~i~~i~~li~~i~~~~lpE 166 (553)
||+.|++.+ ..++.++++|++++++|+.++++ ......|..+++.++++ . +||+.+++..+++++.++++++.||
T Consensus 178 Rfl~G~~~~~~~~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~~Wr~~~~~~~~~~~~~~~~~~l~~E 256 (521)
T KOG0255|consen 178 RFLSGFFGSGPLTVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITRDWRWLFWIISIPSGLFLLLWFLPPE 256 (521)
T ss_pred HHHHHhhccchhHHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHccCc
Confidence 466676554 45667889999999999999999 54444444555444444 4 8999999999999998888777789
Q ss_pred CceeeeecCChHHHHHHHHHHcCCCCCc-chHHHHHHHHHHHHHHHHHhcCCCCCCChhhhhhhhhc-chhHHHHHHHHH
Q psy15864 167 SPHWLISQGRMQEASASLCWLRGWVTPD-KVQTELSQITKAIEESELKRLGKDGQRRPNYRMYMRRT-FLLPYAIVTSLF 244 (553)
Q Consensus 167 sp~~l~~~~~~~~a~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 244 (553)
||||+..+++.+++.+.++++...+... .......... ...... .........+..+++.+ .+...+...+.+
T Consensus 257 s~rwl~~~g~~~~a~~~l~~~a~~n~~~~~~~~~~~~~~-~~~~~~----~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~ 331 (521)
T KOG0255|consen 257 SPRWLLSKGRIDEAIKILKKIAKLNGRKLSVKELLRLEL-LLRPLK----LLFTEPKISFLDLFRTPRLRYRTLYLLFIW 331 (521)
T ss_pred ChHHHHHcCchHHHHHHHHHHHhhcCCCCCcHHHHHHHH-HhhHhh----hhccCCCCchhhhhcCHHHHHHHHHHHHHH
Confidence 9999999999999999998886544211 1111111111 000000 01111112244444444 333333333332
Q ss_pred HHHhhhhhHHHHhhHHHHHHhhCCCCChHHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHHHHHHHHHhh
Q psy15864 245 FIGQFGGMTTLQTYAVGIFESIHAPLDPYFATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAACFIVVAVYAQFH 324 (553)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~ 324 (553)
+.....++.+ .+...+++.+......+.++..+.+....+.+.|++|||..+..+.++..+++++.++...
T Consensus 332 -~~~~~~y~gl------~~~~~~lg~~~~~~~~~~~~~~~p~~~~~~~~~~~~gR~~~~~~~~~~~~~~~~~~~~~~~-- 402 (521)
T KOG0255|consen 332 -FVFSLVYYGL------SLNVSGLGGNIYLNFTLSGLVELPAYFRNGLLLPEFGRRPPLFLSLFLAGIGLLLFGWLPD-- 402 (521)
T ss_pred -HHHhHHHHhh------hhhhhhcCchHHHHHHHHHHHHhhHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHhhc--
Confidence 2222212222 2222334455666666667788888888899999999999999999999999888887542
Q ss_pred cccCCCCChhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhHHHHhhccchhhHHH
Q psy15864 325 LSYGWDSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYYPMLDTFHLWGTLYF 404 (553)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~~~g~~~~~~~ 404 (553)
....+...+...+..++.+.++..+ +.+.+|++|+..|+.+.+.......++++++|.+...... ......+.+
T Consensus 403 ----~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~el~pt~~r~~~~~~~~~~~~~~~i~ap~~~~~~~~-~~~~~~~~~ 476 (521)
T KOG0255|consen 403 ----DLGGWLHWILPLLGKFFIGSAFNLI-FLYSAELIPTVVRNTAVGAISAAARLGSILAPLFPLLLRQ-MFPLLGLIL 476 (521)
T ss_pred ----cchhHHHHHHHHHHHHHHHHHHHHH-HHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-hcccchHHH
Confidence 1111244555555666666666666 6999999999999999999999999999999877654433 222222233
Q ss_pred HHHHHHHHHhhheEEcccCCCCChHH
Q psy15864 405 YAAISVVGTLYMYFVMPETEGRTLRD 430 (553)
Q Consensus 405 ~~~~~~~~~~~~~~~~pet~~~~~~~ 430 (553)
++.+..+.+++..+++|||++..+.+
T Consensus 477 ~~~~~~l~~~~~~~~lpet~~~~l~~ 502 (521)
T KOG0255|consen 477 FGWLALLLGLLSLLLLPETKGKPLPG 502 (521)
T ss_pred HHHHHHHHHHHHHhcCcccCCCCCch
Confidence 46666666667778999999988743
No 15
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.86 E-value=1.1e-20 Score=189.57 Aligned_cols=269 Identities=14% Similarity=0.101 Sum_probs=170.1
Q ss_pred ccccccccccccc-hhhhhhhhhccCcccccchhchhhhhHHHHHHHHHhhcccc----chHHHHHHHHHHHHHHHH-Hh
Q psy15864 88 EKGTFLYKMAAPL-VLVLTYVAEITQPHLRGMLSATASMTTIFGTVSQLFLGSFL----HWRSAAILNLLFPILALC-AL 161 (553)
Q Consensus 88 ~~gr~~~G~ga~~-~~~~~~i~e~~p~~~Rg~~~~~~~~~~~lG~~l~~~l~~~l----gWr~~f~i~~i~~li~~i-~~ 161 (553)
--.|+++|+|.+. ....+.++|++|+++|++++++..++..+|.+++++++..+ |||+.|++.++++++..+ .+
T Consensus 83 ~~~R~l~G~g~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~gWr~~f~~~~~l~~~~~~~~~ 162 (368)
T TIGR00903 83 LACQLLAALGQPFLLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAGGLQLLIIPIAAVAAAGIILVL 162 (368)
T ss_pred HHHHHHHHhHhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHH
Confidence 3468999988763 33456679999999999999999999999999998887766 999999998888877644 44
Q ss_pred ccccCCceeeeecCChHHHHHHHHHHcCCCCCcchHHHHHHHHHHHHHHHHHhcCCCCCCChhhhhhhhhcchhHHHHHH
Q psy15864 162 YFIPESPHWLISQGRMQEASASLCWLRGWVTPDKVQTELSQITKAIEESELKRLGKDGQRRPNYRMYMRRTFLLPYAIVT 241 (553)
Q Consensus 162 ~~lpEsp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (553)
+++||+|++... +.+ .. +.. ..++.++++ +.++..
T Consensus 163 ~~lp~~p~~~~~--~~~-----------------~~----~~~------------------~~~~~ll~~----~~~~~~ 197 (368)
T TIGR00903 163 AALPALPFQAAE--GFG-----------------FK----DAV------------------KEFGALAGR----KDLWII 197 (368)
T ss_pred HHcCCCCCCCCC--Ccc-----------------hH----HHH------------------HHHHHHHcC----hhHHHH
Confidence 558999875210 000 00 000 011222222 223444
Q ss_pred HHHHHHhhhhhHHHHhhHHHHHHhhCCCCChHHHHHHHHHHHHHHHHHHhhhhcccCCc---ceeec-chhHHHHHHHHH
Q psy15864 242 SLFFIGQFGGMTTLQTYAVGIFESIHAPLDPYFATLLLGVAELGGALLCVVLIHYTGKR---PLALI-STGGSAACFIVV 317 (553)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~g~~~~g~l~dr~Grr---~~l~~-~~~~~~i~~~~~ 317 (553)
.+..++....++.+..|+|.++.+.+++...... ..+..+.|.+..++++||+.|| ..... ..++.+++.+++
T Consensus 198 ~~~~~~~~~~~~~~~~wlp~~L~~~g~s~~~~~~---~~l~~~~g~~g~~~~~d~~~r~~~r~~~~~~~~~~~a~~~~~~ 274 (368)
T TIGR00903 198 GAILGFGVALFDNLAIWLEAALRPAGLEDIAGDA---VALAILAGLIGVAVIPDRVARAGLRSIYIRAAALLIAAFFLAL 274 (368)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCChHHHHH---HHHHHHHHHHHHHHhhHHhhhhhhHHHHHHHHHHHHHHHHHHH
Confidence 4455556666777788999999877765432233 3333344445567888887654 22221 222222222222
Q ss_pred HHHHHhhcccCCCCChhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhHHHHhhcc
Q psy15864 318 AVYAQFHLSYGWDSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYYPMLDTFH 397 (553)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~~~g 397 (553)
.. ..+.+..++..++.+++....+ +..+++.+|++|++.||+++|+.+..++++++++|.+.+.+.. +
T Consensus 275 ~~---------~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~p~~~rgt~~G~~~~~g~~~~~~~~~~~~~~~~--~ 342 (368)
T TIGR00903 275 AF---------ELNRLALFAFIGIAGLLMLPAY-AIIMDWIGKFCDKELHGKAAGAIGFTSRAISVALALAAMLFIS--S 342 (368)
T ss_pred HH---------ccccHHHHHHHHHHHHhhhhhH-HHHHHHHHHhcchhhcCcccchhhHHHHHHHHHHHHHHHHHhc--C
Confidence 21 2233333444444444443333 3345889999999999999999999999999999999987773 4
Q ss_pred chhhHHHHHHHHHHHHhhh
Q psy15864 398 LWGTLYFYAAISVVGTLYM 416 (553)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~ 416 (553)
....+.++++..++.++..
T Consensus 343 ~~~~f~~~~~~~~i~~~~~ 361 (368)
T TIGR00903 343 AEAYFTFLAILITIAFAIA 361 (368)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 4455666666655555554
No 16
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.86 E-value=1.5e-20 Score=194.00 Aligned_cols=284 Identities=16% Similarity=0.143 Sum_probs=165.8
Q ss_pred cccccccccc--cchhhhhhhhhccCcccccchhchhhhhHHHHHHHHHhhcc------------ccchHHHHHHHHHHH
Q psy15864 89 KGTFLYKMAA--PLVLVLTYVAEITQPHLRGMLSATASMTTIFGTVSQLFLGS------------FLHWRSAAILNLLFP 154 (553)
Q Consensus 89 ~gr~~~G~ga--~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~lG~~l~~~l~~------------~lgWr~~f~i~~i~~ 154 (553)
-.|+++|++. ..+.+.++++|++|+++||++.++...+..+|.++++++.. ..|||++|++.++++
T Consensus 129 ~~R~l~G~g~g~~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~F~i~~~~~ 208 (432)
T PRK10406 129 LARLFQGLSVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLALLVVVVLQQTLEDAELREWGWRIPFALGAVLA 208 (432)
T ss_pred HHHHHHHhhhhhhHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHHHH
Confidence 3688999865 46788899999999999999999988888888777765422 248999999999888
Q ss_pred HHHHHHhccccCCceeeeecCChHHHHHHHHHHcCCCCCcchHHHHHHHHHHHHHHHHHhcCCCCCCChhhhhhhhhcch
Q psy15864 155 ILALCALYFIPESPHWLISQGRMQEASASLCWLRGWVTPDKVQTELSQITKAIEESELKRLGKDGQRRPNYRMYMRRTFL 234 (553)
Q Consensus 155 li~~i~~~~lpEsp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (553)
++.++++..+||+|++.. .. .. . ...++.+++.+
T Consensus 209 ll~~~~~~~~~e~~~~~~--------~~----~~-------------------------------~-~~~~~~l~~~~-- 242 (432)
T PRK10406 209 VVALWLRRQLDETSQQET--------RA----LK-------------------------------E-AGSLKGLWRNR-- 242 (432)
T ss_pred HHHHHHHhcCCCCchHHH--------hh----hc-------------------------------c-cccHHHHHhhH--
Confidence 877766667898875310 00 00 0 01122222221
Q ss_pred hHHHHHHHHHHHHhhhhhHHHHhhHHHHHHh-hCCCCCh-HHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHH
Q psy15864 235 LPYAIVTSLFFIGQFGGMTTLQTYAVGIFES-IHAPLDP-YFATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAA 312 (553)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~-~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i 312 (553)
+.++......+.....++.+..|+|.++.. .+++... .....+..++.+++.++.|+++||+|||+.++++.++.++
T Consensus 243 -~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~ 321 (432)
T PRK10406 243 -RAFIMVLGFTAAGSLCFYTFTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKIGRRTSMLCFGSLAAL 321 (432)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHH
Confidence 112222222222233455566778887754 5665433 3445555666778888899999999999876655444333
Q ss_pred HHHHHHHHHHhhcccCCCCChhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHH-HHHHHHHHhHH
Q psy15864 313 CFIVVAVYAQFHLSYGWDSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYI-FAFAVNKLYYP 391 (553)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~-~~~i~~~~~~~ 391 (553)
..+.+..... ...+....+....+..++.+... +..+++++|.+|++.|++++|+.+.++++ .+...|.+.+
T Consensus 322 ~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~~~p~~~~- 394 (432)
T PRK10406 322 FTVPILSALQ-----NVSSPYAAFGLVMCALLIVSFYT-SISGILKAEMFPAQVRALGVGLSYAVANALFGGSAEYVAL- 394 (432)
T ss_pred HHHHHHHHHH-----cCCcHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHCCCCccchhhhHHHHHHHHHHHhHHHHHHH-
Confidence 3222211110 01122222222222222222222 33457889999999999999999988765 3445666666
Q ss_pred HHhhccchhhHHHHHHHHHHHHhhheEEcccCCCCC
Q psy15864 392 MLDTFHLWGTLYFYAAISVVGTLYMYFVMPETEGRT 427 (553)
Q Consensus 392 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~pet~~~~ 427 (553)
+++..+.+...++++++..++.++..++ .++++++
T Consensus 395 ~l~~~g~~~~~~~~~~~~~~i~~~~~~~-l~~~~~~ 429 (432)
T PRK10406 395 SLKSIGMETAFFWYVTLMAVVAFLVSLM-LHRKGKG 429 (432)
T ss_pred HHHHhCCCcHHHHHHHHHHHHHHHHHHH-hhhcccc
Confidence 4455564544444443333333333233 3444443
No 17
>PRK15075 citrate-proton symporter; Provisional
Probab=99.83 E-value=1.1e-19 Score=187.67 Aligned_cols=259 Identities=17% Similarity=0.126 Sum_probs=154.5
Q ss_pred ccccccccccc--chhhhhhhhhccCcccccchhchhhhhHHHHHHHHHhhcc------------ccchHHHHHHHHHHH
Q psy15864 89 KGTFLYKMAAP--LVLVLTYVAEITQPHLRGMLSATASMTTIFGTVSQLFLGS------------FLHWRSAAILNLLFP 154 (553)
Q Consensus 89 ~gr~~~G~ga~--~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~lG~~l~~~l~~------------~lgWr~~f~i~~i~~ 154 (553)
-+|+++|++.+ .+...++++|++|+++|++++++...+..+|.++++.++. .+|||++|++.+++.
T Consensus 122 ~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~g~~~g~~~g~~l~~~~~~~~~~~~gWr~~f~~~~~~~ 201 (434)
T PRK15075 122 LGRLLQGFSAGVELGGVSVYLAEIATPGRKGFYTSWQSASQQVAVVFAALLGYLLNQWLSPAQMAEWGWRIPFLIGCLIV 201 (434)
T ss_pred HHHHHhhccccccHHHHHHHHHhhCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHHHH
Confidence 47999999876 4456789999999999999999988776666655544433 239999999865544
Q ss_pred HHHHHHhccccCCceeeeecCChHHHHHHHHHHcCCCCCcchHHHHHHHHHHHHHHHHHhcCCCCCCChhhhhhhhhcch
Q psy15864 155 ILALCALYFIPESPHWLISQGRMQEASASLCWLRGWVTPDKVQTELSQITKAIEESELKRLGKDGQRRPNYRMYMRRTFL 234 (553)
Q Consensus 155 li~~i~~~~lpEsp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (553)
++.+++....||++.+...+ .. ......++...+.
T Consensus 202 ~~~~~~~~~~~e~~~~~~~~-------------~~-----------------------------~~~~~~~~~~~~~--- 236 (434)
T PRK15075 202 PFIFLIRRSLEETEEFLARK-------------HR-----------------------------PSMREIFRSLAAN--- 236 (434)
T ss_pred HHHHHHHHhcCCCHHHHHhh-------------hc-----------------------------cccccHHHHHHHh---
Confidence 33333333355543210000 00 0000011111111
Q ss_pred hHHHHHHHHHHHHhhhhhHHHHhhHHHHHHh-hCCCCCh-HHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHH
Q psy15864 235 LPYAIVTSLFFIGQFGGMTTLQTYAVGIFES-IHAPLDP-YFATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAA 312 (553)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~-~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i 312 (553)
++.++..++..+.....++.+..|.|.+++. .|++... .+..++..++.+++++++|+++||+|||++++.+.++.++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~ 316 (434)
T PRK15075 237 WRIVLAGMLMVAMTTVSFYLITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAIL 316 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHH
Confidence 1122222222333344566677888888865 5765433 3556677788899999999999999999887665443322
Q ss_pred HHHHHHHHHHhhcccCCCCChhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHH-HHHHHHHHhHH
Q psy15864 313 CFIVVAVYAQFHLSYGWDSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYI-FAFAVNKLYYP 391 (553)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~-~~~i~~~~~~~ 391 (553)
..+....... ...+.....+..++.+++.+... +..+.++.|.+|++.|+++.++.+.++.. ++.++|.+.+.
T Consensus 317 ~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~ 390 (434)
T PRK15075 317 TAYPALSWLV-----AAPSFARMLAVELWLSFLYGSYN-GAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAISTW 390 (434)
T ss_pred HHHHHHHHHH-----cCCchHHHHHHHHHHHHHHHHHH-hhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHHHH
Confidence 2211111110 02222222232333344443332 33347789999999999999997666654 58889999999
Q ss_pred HHhhccc
Q psy15864 392 MLDTFHL 398 (553)
Q Consensus 392 ~~~~~g~ 398 (553)
+.+..++
T Consensus 391 i~~~~g~ 397 (434)
T PRK15075 391 LIHVTGD 397 (434)
T ss_pred HHHhcCC
Confidence 9888774
No 18
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.83 E-value=4.8e-20 Score=188.91 Aligned_cols=273 Identities=15% Similarity=0.128 Sum_probs=176.7
Q ss_pred ccccccccccc--chhhhhhhhhccCcccccchhchhhhhHHHHHHHHHhhcccc----chHHHHHHHHHHHHHHHH-Hh
Q psy15864 89 KGTFLYKMAAP--LVLVLTYVAEITQPHLRGMLSATASMTTIFGTVSQLFLGSFL----HWRSAAILNLLFPILALC-AL 161 (553)
Q Consensus 89 ~gr~~~G~ga~--~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~lG~~l~~~l~~~l----gWr~~f~i~~i~~li~~i-~~ 161 (553)
-.|+++|++.+ .+...+++.|++|+++|+++++++..+..+|.++++.++..+ +||+.|++.+++.++.++ ..
T Consensus 108 ~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (406)
T PRK11551 108 VARLLTGVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGVLAAGDAAWRHIFYVGGVGPLLLVPLLM 187 (406)
T ss_pred HHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHHHHHHHHHHH
Confidence 45788888754 446678999999999999999999999999999998877543 899999998877666544 44
Q ss_pred ccccCCceeeeecCChHHHHHHHHHHcCCCCCcchHHHHHHHHHHHHHHHHHhcCCCCCCChhhhhhhhhcchhHHHHHH
Q psy15864 162 YFIPESPHWLISQGRMQEASASLCWLRGWVTPDKVQTELSQITKAIEESELKRLGKDGQRRPNYRMYMRRTFLLPYAIVT 241 (553)
Q Consensus 162 ~~lpEsp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (553)
+++||+|++...+...++.. ......++....... ...
T Consensus 188 ~~l~~~~~~~~~~~~~~~~~-----------------------------------------~~~~~~~~~~~~~~~-~~~ 225 (406)
T PRK11551 188 RWLPESRAFAQAAGAGKQRA-----------------------------------------PVLRALFGEGRATAT-LLL 225 (406)
T ss_pred HhCCCChhHHhccCcchhhh-----------------------------------------hhHHHHhhhhhhhHH-HHH
Confidence 55899875421111000000 000001111000111 111
Q ss_pred HHHHHHhhhhhHHHHhhHHHHHHhhCCCCC-hHHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHHHHHHH
Q psy15864 242 SLFFIGQFGGMTTLQTYAVGIFESIHAPLD-PYFATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAACFIVVAVY 320 (553)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~ 320 (553)
.+..+......+....|.|.++...|.+.. .........++.+++.++.|+++||+|||+.+.++++..+++.+++..
T Consensus 226 ~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~- 304 (406)
T PRK11551 226 WISYFFTLIVLYFLLNWLPSLLVGQGLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGILASLAALAA- 304 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHh-
Confidence 111222223344555677888777776543 346666778899999999999999999998877755555554443332
Q ss_pred HHhhcccCCCCChhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhHHHHhhccchh
Q psy15864 321 AQFHLSYGWDSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYYPMLDTFHLWG 400 (553)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~~~g~~~ 400 (553)
..+.+.+++..++.+++.+.. .+..++++.|.+|++.|+++.|+.+.+..+++.++|.+.+.+.+..+.+.
T Consensus 305 --------~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~ 375 (406)
T PRK11551 305 --------APSFAGMLLAGFAAGLFVVGG-QSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLALGRSTV 375 (406)
T ss_pred --------cCcHHHHHHHHHHHHHHHHhH-HHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhccCCchH
Confidence 333444444455555544333 34445788999999999999999999999999999999999988765554
Q ss_pred hHHHHHHHHHHHH
Q psy15864 401 TLYFYAAISVVGT 413 (553)
Q Consensus 401 ~~~~~~~~~~~~~ 413 (553)
.++...+.+.+++
T Consensus 376 ~~~~~~~~~~~~~ 388 (406)
T PRK11551 376 GVIGASIPVILVA 388 (406)
T ss_pred HHHHHHHHHHHHH
Confidence 4444443333333
No 19
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.83 E-value=2.2e-19 Score=175.20 Aligned_cols=267 Identities=20% Similarity=0.169 Sum_probs=177.2
Q ss_pred cccccccccc--chhhhhhhhhccCcccccchhchhhhhHHHHHHHHHhhcccc----chHHHHHHHHHHHHHHHHHh-c
Q psy15864 90 GTFLYKMAAP--LVLVLTYVAEITQPHLRGMLSATASMTTIFGTVSQLFLGSFL----HWRSAAILNLLFPILALCAL-Y 162 (553)
Q Consensus 90 gr~~~G~ga~--~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~lG~~l~~~l~~~l----gWr~~f~i~~i~~li~~i~~-~ 162 (553)
+|++.|++.+ .++..++.+++.|+++|+++++++..+..++.++|..++.++ |||+.|++.+++++++++.. .
T Consensus 107 aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~GWR~~F~~ia~l~ll~~~~~~~ 186 (394)
T COG2814 107 ARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQLFGWRATFLAIAVLALLALLLLWK 186 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH
Confidence 6888888655 567778999999999999999999999998888877766665 99999999999999886555 4
Q ss_pred cccCCceeeeecCChHHHHHHHHHHcCCCCCcchHHHHHHHHHHHHHHHHHhcCCCCCCChhhhhhhhhcchhHHHHHHH
Q psy15864 163 FIPESPHWLISQGRMQEASASLCWLRGWVTPDKVQTELSQITKAIEESELKRLGKDGQRRPNYRMYMRRTFLLPYAIVTS 242 (553)
Q Consensus 163 ~lpEsp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (553)
.+| |+-.. ++. ..........++++.....++.++
T Consensus 187 ~lP--~~~~~--~~~-----------------------------------------~~~~~~~~~~l~~p~v~~~l~~t~ 221 (394)
T COG2814 187 LLP--PSEIS--GSL-----------------------------------------PGPLRTLLRLLRRPGVLLGLLATF 221 (394)
T ss_pred hCC--CccCC--CCC-----------------------------------------CcchhHHHHHhcCchHHHHHHHHH
Confidence 488 21100 000 000001112233333333333333
Q ss_pred HHHHHhhhhhHHHHhhH-HHHHHhhCCCC-ChHHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHHHHHHH
Q psy15864 243 LFFIGQFGGMTTLQTYA-VGIFESIHAPL-DPYFATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAACFIVVAVY 320 (553)
Q Consensus 243 ~~~~~~~~~~~~~~~~~-~~~~~~~g~~~-~~~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~ 320 (553)
..+.+.+....|. |.+.+..|++. ...+..+.++++.++|++++|+++|| +.|+.+.....++++..+.+.+.
T Consensus 222 ----l~~~g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~~l~~~~~l~a~~~l~l~~~ 296 (394)
T COG2814 222 ----LFMTGHFALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR-GPRRALIAALLLLALALLALTFT 296 (394)
T ss_pred ----HHHcchhhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc-cchhHHHHHHHHHHHHHHHHHHh
Confidence 3333333444444 44444567654 44588889999999999999999999 88888877777777666665553
Q ss_pred HHhhcccCCCCChhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhHHHHhhccchh
Q psy15864 321 AQFHLSYGWDSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYYPMLDTFHLWG 400 (553)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~~~g~~~ 400 (553)
..+.+..++..++.++.......... +..++ .-++.+..+.+++....+++..++..++|.++++.++..
T Consensus 297 --------~~~~~~~~~~~~~wg~a~~~~~~~~~-~~~a~-~~p~~~~~a~sl~~aa~nlgia~GA~lGG~v~~~~g~~~ 366 (394)
T COG2814 297 --------GASPALALALLFLWGFAFSPALQGLQ-TRLAR-LAPDAADLAGSLNVAAFNLGIALGAALGGLVLDALGYAA 366 (394)
T ss_pred --------cchHHHHHHHHHHHHHHhhhhhhHHH-HHhcc-cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchHH
Confidence 33444444444444443333322222 34444 225778999999999999999999999999999988766
Q ss_pred hHHHHHHHHHHHHhhh
Q psy15864 401 TLYFYAAISVVGTLYM 416 (553)
Q Consensus 401 ~~~~~~~~~~~~~~~~ 416 (553)
..++.+++.++..++.
T Consensus 367 ~~~~~a~l~~~a~~~~ 382 (394)
T COG2814 367 TGWVGAALLLLALLLA 382 (394)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 6666555555554444
No 20
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.82 E-value=1.8e-19 Score=185.33 Aligned_cols=287 Identities=14% Similarity=0.071 Sum_probs=191.5
Q ss_pred cccccccccc--chhhhhhhhhccCcccccchhchhhhhHHHHHHHHHhhcccc----chHHHHHHHHHHHHHHHHHhcc
Q psy15864 90 GTFLYKMAAP--LVLVLTYVAEITQPHLRGMLSATASMTTIFGTVSQLFLGSFL----HWRSAAILNLLFPILALCALYF 163 (553)
Q Consensus 90 gr~~~G~ga~--~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~lG~~l~~~l~~~l----gWr~~f~i~~i~~li~~i~~~~ 163 (553)
.|++.|++.+ .+...+++.+++|+++|+++.++..++..+|.++|+.+++.+ +||+.|++.++..++.+++.++
T Consensus 116 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (417)
T PRK10489 116 LGLWDGFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPALGGLLIAAGGVAWNYGLAAAGTFITLLPLLR 195 (417)
T ss_pred HHHHHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHh
Confidence 4566666543 234557789999999999999999999999999999887765 8999999988887777766667
Q ss_pred ccCCceeeeecCChHHHHHHHHHHcCCCCCcchHHHHHHHHHHHHHHHHHhcCCCCCCChhhhhhhhhcchhHHHHHHHH
Q psy15864 164 IPESPHWLISQGRMQEASASLCWLRGWVTPDKVQTELSQITKAIEESELKRLGKDGQRRPNYRMYMRRTFLLPYAIVTSL 243 (553)
Q Consensus 164 lpEsp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (553)
+|++++....+.+ . ..+.. ..++..++++..+..++..++
T Consensus 196 l~~~~~~~~~~~~------------------~----~~~~~------------------~~~~~~~~~~~~~~~~~~~~~ 235 (417)
T PRK10489 196 LPALPPPPQPREH------------------P----LRSLL------------------AGFRFLLASPVVGGIALLGGL 235 (417)
T ss_pred CCCCCCCCccccc------------------c----hHHHH------------------HHHHHHHcChHHHHHHHHHHH
Confidence 7776432100000 0 00000 011112222222222222111
Q ss_pred HHHHhhhhhHHHHhhHHHHHHh-hCCCCC-hHHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHHHHHHHH
Q psy15864 244 FFIGQFGGMTTLQTYAVGIFES-IHAPLD-PYFATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAACFIVVAVYA 321 (553)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~-~g~~~~-~~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~ 321 (553)
. .. ......+.|.+... .+.+.. ..+.....+++.+++.++.+++.||.++++.+..+.++.+++.+++..
T Consensus 236 ~----~~-~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~-- 308 (417)
T PRK10489 236 L----TM-ASAVRVLYPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSARPGLLMLLSTLGSFLAVGLFGL-- 308 (417)
T ss_pred H----HH-HHhHHHhhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcchHHHHHHHHHHHHHHHHHc--
Confidence 1 11 22334556666665 565543 346666778899999999999999977777777666666655554443
Q ss_pred HhhcccCCCCChhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhHHHHhhccchhh
Q psy15864 322 QFHLSYGWDSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYYPMLDTFHLWGT 401 (553)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~~~g~~~~ 401 (553)
..+.+..+++.++.+++.+.. .+...+++.+.+|++.||++.|+.+....+++.+++.+.|.+.+..+....
T Consensus 309 -------~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~g~~~~ 380 (417)
T PRK10489 309 -------MPMWILAVLCLALFGYLSAIS-SLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAMMTPVAS 380 (417)
T ss_pred -------cchHHHHHHHHHHHHHHHHHH-HHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhchhhH
Confidence 333444455555556554433 233457888999999999999999999999999999999999998887777
Q ss_pred HHHHHHHHHHHHhhheEEcccCCCCChHHH
Q psy15864 402 LYFYAAISVVGTLYMYFVMPETEGRTLRDI 431 (553)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~~pet~~~~~~~~ 431 (553)
+.+.+++..++.++.+..+|++++++.+|.
T Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (417)
T PRK10489 381 ASASGFGLLIIGVLLLLVLGELRRFRQTPP 410 (417)
T ss_pred HHHHHHHHHHHHHHHHHhcccccccccccc
Confidence 777777777777777778898887776554
No 21
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.82 E-value=1.5e-19 Score=188.47 Aligned_cols=295 Identities=12% Similarity=0.013 Sum_probs=175.3
Q ss_pred cccccccccccc--cchhhhhhhhhccCcccccchhchhhhhHHHHHHHHHhhcccc-------chHHHHHHHHHHHHHH
Q psy15864 87 EEKGTFLYKMAA--PLVLVLTYVAEITQPHLRGMLSATASMTTIFGTVSQLFLGSFL-------HWRSAAILNLLFPILA 157 (553)
Q Consensus 87 ~~~gr~~~G~ga--~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~lG~~l~~~l~~~l-------gWr~~f~i~~i~~li~ 157 (553)
---.|+++|++. ..+...++++|++|+++||++++++.++..+|.+++++++.++ +||..|.+.++++++.
T Consensus 125 l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~~~~~~~~~~~~f~~~g~~~~~~ 204 (467)
T PRK09556 125 MIALWALSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALWGANYFFDGHVIGMFIFPSIIALII 204 (467)
T ss_pred HHHHHHHHHHHHhccchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHHHHHHHHhhccCcchhHHHHHHHHHHHH
Confidence 334677777753 3567778999999999999999999999999999988775422 5999999888887766
Q ss_pred HHHh-ccccCCceeeeecCChHHHHHHHHHHcCCCCCcchHHHHHHHHHHHHHHHHHhcCCCCCCChhhhhhhhhcchhH
Q psy15864 158 LCAL-YFIPESPHWLISQGRMQEASASLCWLRGWVTPDKVQTELSQITKAIEESELKRLGKDGQRRPNYRMYMRRTFLLP 236 (553)
Q Consensus 158 ~i~~-~~lpEsp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (553)
.++. ++++++|...... +.++ . .......+ .. . .. .........+.+...+.+
T Consensus 205 ~i~~~~~~~~~p~~~~~~-~~~~---~---~~~~~~~~---------------~~-~--~~-~~~~~~~~~~~~~~l~~~ 258 (467)
T PRK09556 205 GFIGLRYGSDSPEELGWG-KAEE---I---FGEPISEE---------------DK-E--TE-STDMTKWQIFVEYVLKNP 258 (467)
T ss_pred HHHHHHhCCCChhhcCCC-Chhh---c---ccCccchh---------------hh-c--cc-cccCcHHHHHHHHHHcCh
Confidence 4444 3456665321000 0000 0 00000000 00 0 00 000000011111112223
Q ss_pred HHHHHHHHHHHhhhhhHHHHhhHHHHHHh-hCCCCC-hHHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHH
Q psy15864 237 YAIVTSLFFIGQFGGMTTLQTYAVGIFES-IHAPLD-PYFATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAACF 314 (553)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~-~~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~ 314 (553)
.++...+..++.......+..|+|.++.+ .|++.. ..+..++..++.++|.+++|+++||+|||+.+++...+.+++.
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~~~~~~~~ 338 (467)
T PRK09556 259 VIWLLCFANIFLYIVRIGIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRALVACIALALIIF 338 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHH
Confidence 33444444444444555677888887754 666543 3466667788899999999999999999987655443333322
Q ss_pred HHHHHHHHhhcccCCCCChhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHH-HHHHHHHHhHHHH
Q psy15864 315 IVVAVYAQFHLSYGWDSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYI-FAFAVNKLYYPML 393 (553)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~-~~~i~~~~~~~~~ 393 (553)
.++.+ .. ..+.+..++..++.+++........ ..++.|.+|++.||++.|+.+.++++ +++++|.+.|.+.
T Consensus 339 ~~~~~-~~------~~~~~~~~~~~~~~G~~~~~~~~~~-~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~ 410 (467)
T PRK09556 339 TLGVY-QH------ATSEYMYLASLFALGFLVFGPQLLI-GVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIA 410 (467)
T ss_pred HHHHH-Hh------cCcHHHHHHHHHHHHHHHhhHHHHH-HHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHh
Confidence 22221 10 2233344444555554322222222 25667999999999999999999997 6699999999999
Q ss_pred h------------hccchhhHHHHHHHHHHHHhh
Q psy15864 394 D------------TFHLWGTLYFYAAISVVGTLY 415 (553)
Q Consensus 394 ~------------~~g~~~~~~~~~~~~~~~~~~ 415 (553)
+ ..+|...+.++.++.++.+++
T Consensus 411 ~~~~~g~~~~~~~~~~~~~~f~~~~~~~~~~~~~ 444 (467)
T PRK09556 411 DPTKNGTPIFGYTLTGWAGTFAALDIAAIGCICL 444 (467)
T ss_pred cccccccccccccccChHHHHHHHHHHHHHHHHH
Confidence 8 456555565554444444433
No 22
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.82 E-value=3.7e-19 Score=183.62 Aligned_cols=292 Identities=14% Similarity=0.057 Sum_probs=173.8
Q ss_pred ccccccccccc--chhhhhhhhhccCcccccchhchhhhhHHHHHHHHHhhcccc----chHHHHHHHHHHHHHHHHHhc
Q psy15864 89 KGTFLYKMAAP--LVLVLTYVAEITQPHLRGMLSATASMTTIFGTVSQLFLGSFL----HWRSAAILNLLFPILALCALY 162 (553)
Q Consensus 89 ~gr~~~G~ga~--~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~lG~~l~~~l~~~l----gWr~~f~i~~i~~li~~i~~~ 162 (553)
-.|++.|++.+ .+....++.|++|+++|+++++++..+..+|.++++.+...+ +||++|++.+++.++.+++..
T Consensus 111 ~~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~~~~w~~~f~i~~~~~~~~~~~~~ 190 (426)
T PRK12307 111 LSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAEAYGWRAAFFVGLLPVLLVIYIRA 190 (426)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHcccCCHHHHHHHHHHHHHHHHHHHH
Confidence 35888888654 556778999999999999999999999999999988776543 999999986655444444444
Q ss_pred cccCCceeeeecCChHHHHHHHHHHcCCCCCcchHHHHHHHHHHHHHHHHHhcCCCCCCChhhhhhhhhcchhHHHHHHH
Q psy15864 163 FIPESPHWLISQGRMQEASASLCWLRGWVTPDKVQTELSQITKAIEESELKRLGKDGQRRPNYRMYMRRTFLLPYAIVTS 242 (553)
Q Consensus 163 ~lpEsp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (553)
..||++++...+. ....+..... . ......++.+++++..+..++...
T Consensus 191 ~~p~~~~~~~~~~------------~~~~~~~~~~--~------------------~~~~~~~~~~~~~~~~~~~~~~~~ 238 (426)
T PRK12307 191 RAPESKEWEEAKL------------SGKGKHSQSA--W------------------SVFSLSMKGLFNRAQFPLTLCVFI 238 (426)
T ss_pred HCCCChHHHHhhh------------hccccccccc--h------------------hhhhHHHHHHHhhchHHHHHHHHH
Confidence 4677654311000 0000000000 0 000012223333333322222222
Q ss_pred HHHHHhhhhhHHHHhhHHHHHHhhCCCCCh-HHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHHHHHHHH
Q psy15864 243 LFFIGQFGGMTTLQTYAVGIFESIHAPLDP-YFATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAACFIVVAVYA 321 (553)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~ 321 (553)
..+..+.....+..++|.++...+.+... .....+..++.+++.++.|+++||+|||+.+..+.++.+++.+++...
T Consensus 239 -~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~- 316 (426)
T PRK12307 239 -VLFSIFGANWPIFGLLPTYLAGEGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRIGLKKTFSIGLLMSFLFIFPLFRI- 316 (426)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHH-
Confidence 22222333334556677777766665332 345566778899999999999999999988777766655544433321
Q ss_pred HhhcccCCCCChhHHHHHHHHHHHH-hhhhccccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhHHHHhhccchh
Q psy15864 322 QFHLSYGWDSPLVPTVFLVLAAFLT-HICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYYPMLDTFHLWG 400 (553)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~~~g~~~ 400 (553)
...... .+..++++.+. ..+..++...++.|.+|++.||+++|+...+..+++.++|.+.+.+.+..+...
T Consensus 317 -------~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~~~~gp~~~g~l~~~~g~~~ 388 (426)
T PRK12307 317 -------PQDNYL-LLGACLFGLMATNVGVGGLVPKFLYDYFPLEVRGLGTGLIYNLAATSGTFNSMAATWLGITMGLGA 388 (426)
T ss_pred -------ccccHH-HHHHHHHHHHHhcccHhHHHHHHHHHhCcHHHHhhhhhHHHHHHhHHHHHHHHHHHHHHHcccHHH
Confidence 111222 22222222221 122223334677899999999999999999999999999999999988877443
Q ss_pred h-HHHHHHHHHHHHhhheEEccc
Q psy15864 401 T-LYFYAAISVVGTLYMYFVMPE 422 (553)
Q Consensus 401 ~-~~~~~~~~~~~~~~~~~~~pe 422 (553)
. +++.++.+.+..++..++.|+
T Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~ 411 (426)
T PRK12307 389 ALTFIVAFWTATILLIIGLSIPD 411 (426)
T ss_pred HHHHHHHHHHHHHHhhccccCCh
Confidence 3 222333333333333344554
No 23
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.82 E-value=1.7e-19 Score=186.18 Aligned_cols=299 Identities=12% Similarity=0.089 Sum_probs=174.0
Q ss_pred cccccccc--cchhhhhhhhhccCcccccchhchhhhhHHHHHHHHHhhcccc----chHHHHHHHHHHHHHHH-HHhcc
Q psy15864 91 TFLYKMAA--PLVLVLTYVAEITQPHLRGMLSATASMTTIFGTVSQLFLGSFL----HWRSAAILNLLFPILAL-CALYF 163 (553)
Q Consensus 91 r~~~G~ga--~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~lG~~l~~~l~~~l----gWr~~f~i~~i~~li~~-i~~~~ 163 (553)
|++.|++. ..+...+++.+++|+++|+++++++..+..+|.++++++++.+ +||+.|++.++++++.. +..++
T Consensus 118 ~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~gw~~~f~~~~i~~~~~~~~~~~~ 197 (434)
T PRK11663 118 WVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIALHYGWRYGMMIAGIIAIVVGLFLCWR 197 (434)
T ss_pred HHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 44555433 3456778999999999999999999999999999988776654 99999999888776554 44455
Q ss_pred ccCCceeeeecCChHHHHHHHHHHcCCCCCcchHHHHHHHHHHHHHHHHHhcCCCCCCChhhhhhhh-hcchhHHHHHHH
Q psy15864 164 IPESPHWLISQGRMQEASASLCWLRGWVTPDKVQTELSQITKAIEESELKRLGKDGQRRPNYRMYMR-RTFLLPYAIVTS 242 (553)
Q Consensus 164 lpEsp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 242 (553)
++|+|.+.......+...+. .. . . ... . .....++..+. ...+.+.++...
T Consensus 198 ~~~~p~~~~~~~~~~~~~~~-------------~~----~---~-~~~------~-~~~~~~~~~~~~~~~~~~~~~~~~ 249 (434)
T PRK11663 198 LRDKPQAMGLPSVGEWRHDA-------------LE----L---A-QQQ------E-GAGLSRKEILTKYVLLNPYIWLLS 249 (434)
T ss_pred cCCCHhhcCCCCcccccccc-------------cc----c---c-hhc------c-ccCCChhhhHHHHHhcChHHHHHH
Confidence 78877532100000000000 00 0 0 000 0 00001111111 111112223333
Q ss_pred HHHHHhhhhhHHHHhhHHHHHH-hhCCCCCh-HHHHHHHHHHHHHHHHHHhhhhcccC--Cccee-ecchhHHHHHHHHH
Q psy15864 243 LFFIGQFGGMTTLQTYAVGIFE-SIHAPLDP-YFATLLLGVAELGGALLCVVLIHYTG--KRPLA-LISTGGSAACFIVV 317 (553)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~-~~~~~~~~i~~~~g~~~~g~l~dr~G--rr~~l-~~~~~~~~i~~~~~ 317 (553)
+..+........+..|+|.++. ..|++... ....+++.++.++|.+++|+++||+. +|... ....+..+++.+.+
T Consensus 250 ~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~~~~~~~~~~~~ 329 (434)
T PRK11663 250 FSYVLVYVVRAAINDWGNLYMSETLGVDLVTANSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGILLSVGSL 329 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHHHHHHHHHHHHH
Confidence 3333334445556677888874 45665433 46666788899999999999999983 33332 22111212121111
Q ss_pred HHHHHhhcccCCCCChhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhHHHHhhcc
Q psy15864 318 AVYAQFHLSYGWDSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYYPMLDTFH 397 (553)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~~~g 397 (553)
.... ..+.....+..+..+++. .+.......+++|.+|++.||+++|+.+.+.+++++++|.+++++.+..+
T Consensus 330 ~~~~-------~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~p~~~g~l~~~~g 401 (434)
T PRK11663 330 WLMP-------FASYVMQAACFFTIGFFV-FGPQMLIGMAAAECSHKEAAGAATGFVGLFAYLGAALSGYPLAKVLEIWH 401 (434)
T ss_pred HHcc-------cccHHHHHHHHHHHHHHH-hhHHHHHHHHHHhcccHhhHHhHHHHHHHHHHHHHHHhcccHHHHHHhcc
Confidence 1111 112222222222222221 11112223566899999999999999999999999999999999999888
Q ss_pred chhhHHHHHHHHHHHHhhheEEcccCCC
Q psy15864 398 LWGTLYFYAAISVVGTLYMYFVMPETEG 425 (553)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~pet~~ 425 (553)
+...+.+.+++.++.+++.+++.+++++
T Consensus 402 ~~~~f~~~~~~~~~~~~~~~~~~~~~~~ 429 (434)
T PRK11663 402 WTGFFVVISIAAGISALLLLPFLNAQAP 429 (434)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHhhhch
Confidence 7777777777766666655555554443
No 24
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.80 E-value=7.8e-19 Score=179.78 Aligned_cols=279 Identities=13% Similarity=0.104 Sum_probs=167.0
Q ss_pred cccccccccccc--hhhhhhhhhccCcccccchhchhhhhHHHHHHHHHhhccc----------cchHHHHHHHHHHHHH
Q psy15864 89 KGTFLYKMAAPL--VLVLTYVAEITQPHLRGMLSATASMTTIFGTVSQLFLGSF----------LHWRSAAILNLLFPIL 156 (553)
Q Consensus 89 ~gr~~~G~ga~~--~~~~~~i~e~~p~~~Rg~~~~~~~~~~~lG~~l~~~l~~~----------lgWr~~f~i~~i~~li 156 (553)
-.|+++|++.+. +...+++.|++|+++|+++++++..+..+|.++++++++. .|||++|++.++++++
T Consensus 101 ~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~gwr~~f~~~~~~~l~ 180 (412)
T TIGR02332 101 LLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILALDGLMALKGWQWLFLLEGFPSVI 180 (412)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCccchhHHHHHHHHHHHH
Confidence 468888887653 5566789999999999999999999999999888877643 3899999999888876
Q ss_pred HH-HHhccccCCce---eeeecCChHHHHHHHHHHcCCCCC-cchHHHHHHHHHHHHHHHHHhcCCCCCCChhhhhhhhh
Q psy15864 157 AL-CALYFIPESPH---WLISQGRMQEASASLCWLRGWVTP-DKVQTELSQITKAIEESELKRLGKDGQRRPNYRMYMRR 231 (553)
Q Consensus 157 ~~-i~~~~lpEsp~---~l~~~~~~~~a~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (553)
.. +.++++||+|+ |+.. ++.....+.++..... +..... . ..........++.++
T Consensus 181 ~~~~~~~~~~~~p~~~~~l~~----~~~~~~~~~~~~~~~~~~~~~~~---~-----------~~~~~~~~~~~~~~~-- 240 (412)
T TIGR02332 181 LGVMTWFWLDDSPDKAKWLDE----EDKKALKEMIDNDQLTLEQPEGA---F-----------AHAAMPQRSMLREIF-- 240 (412)
T ss_pred HHHHHhhccCCCcccCCCCCH----HHHHHHHHHHHhccccccccccc---c-----------ccccccHHHHHHHhc--
Confidence 64 44556899884 2211 1111111111000000 000000 0 000000001122222
Q ss_pred cchhHHHHHHHHHHHHhhhhhHHHHhhHHHHHHhh--CCCC-ChHHHHHHHHHHHHHHHHHHhhhhcccCCccee-ecch
Q psy15864 232 TFLLPYAIVTSLFFIGQFGGMTTLQTYAVGIFESI--HAPL-DPYFATLLLGVAELGGALLCVVLIHYTGKRPLA-LIST 307 (553)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~~~-~~~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l-~~~~ 307 (553)
.+.++...+.+++....++.+..|+|.+++.. +++. .......+..++.++|.+++|+++||++||+.. ....
T Consensus 241 ---~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~~~r~~~~~~~~ 317 (412)
T TIGR02332 241 ---TPAIMLYTLAYFCLTNTLSAINIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRLKERKHHTALPY 317 (412)
T ss_pred ---ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhcccCccHHHHHHHH
Confidence 12233444445555556777788999999764 3332 234566778889999999999999999987643 3333
Q ss_pred hHHHHHHHHHHHHHHhhcccCCCCChhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHHHHHH
Q psy15864 308 GGSAACFIVVAVYAQFHLSYGWDSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNK 387 (553)
Q Consensus 308 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~ 387 (553)
++.++++ ++... .......++..++.+++. ....++.++...|.+|++.|++++|+.+.+++++++++|.
T Consensus 318 ~~~~~~~-~~~~~--------~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~a~g~~~~~~~~g~~~~p~ 387 (412)
T TIGR02332 318 LFAAAGW-LLASA--------TDHNLIQLLGIIMASMGS-FSAMAIFWTTPDQSISLQARAIAIAVINATGNIGSALSPF 387 (412)
T ss_pred HHHHHHH-HHHHh--------cCCHHHHHHHHHHHHHHh-hhhhhHHHhhcccccchHHHHHHHHHHHHhhhhhhhhhhh
Confidence 3333322 11110 112122222222222211 1112333356678899999999999999999999999999
Q ss_pred HhHHHHhhccchh
Q psy15864 388 LYYPMLDTFHLWG 400 (553)
Q Consensus 388 ~~~~~~~~~g~~~ 400 (553)
+.+.+.+..+.|.
T Consensus 388 ~~g~i~~~~g~~~ 400 (412)
T TIGR02332 388 LIGILKDATGSFN 400 (412)
T ss_pred hcccccccCCCCc
Confidence 9999988776333
No 25
>KOG0569|consensus
Probab=99.80 E-value=6.5e-20 Score=184.39 Aligned_cols=166 Identities=17% Similarity=0.174 Sum_probs=131.2
Q ss_pred HHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHHHHHHHHHhhcccCCCCChhHHHHHHHHHHHHhhhhccc
Q psy15864 274 FATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAACFIVVAVYAQFHLSYGWDSPLVPTVFLVLAAFLTHICIRLL 353 (553)
Q Consensus 274 ~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (553)
...+++.+|+++|++++++++|++|||..++++.++..++.+++.+... .....++++++++.|...+.....+
T Consensus 64 ~~vs~f~iG~~~Gs~~~~~la~~~GRK~~l~~~~~l~~~~~~~~~~s~~------~~~~e~li~GR~i~Gl~~gl~~~~~ 137 (485)
T KOG0569|consen 64 LIVSIFFIGGMIGSFSSGLLADRFGRKNALLLSNLLAVLAALLMGLSKS------APSFEMLILGRLIVGLACGLSTGLV 137 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHH------hhhHHHHHHHHHHHHHHhHHHHHHH
Confidence 4455678999999999999999999999999988888888877776554 6678889999999999999998888
Q ss_pred cceeeccccccchhhhhhhHHHHHHHHHHHHHHHH-hHHHHhhccchhhHHHHHHHHHHHHhhheEEcccC-------CC
Q psy15864 354 PWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKL-YYPMLDTFHLWGTLYFYAAISVVGTLYMYFVMPET-------EG 425 (553)
Q Consensus 354 ~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~pet-------~~ 425 (553)
+ +|+.|+.|.+.||....+......+|..++..+ ...+.+....|..+..+.++..++.++.+.++||| ++
T Consensus 138 p-myl~E~sP~~~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i~~~~~l~~l~~~PESPk~Ll~~k~ 216 (485)
T KOG0569|consen 138 P-MYLTEISPKNLRGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPLIPALLQLALLPFLPESPKYLLIKKG 216 (485)
T ss_pred H-HHHhhcChhhhccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCCCcchHHHHcC
Confidence 7 999999999999998877777777776666333 34455555556666677777777788888999998 56
Q ss_pred CChHHHHHHHhccCCcchhhH
Q psy15864 426 RTLRDIEEHFADKGKTFVTNI 446 (553)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~~~~ 446 (553)
+..++.+++...++..++...
T Consensus 217 ~~~~A~~sl~~y~G~~~~~~~ 237 (485)
T KOG0569|consen 217 DEEEARKALKFYRGKEDVEAE 237 (485)
T ss_pred CHHHHHHHHHHHhCCCcchhH
Confidence 666777788877776643333
No 26
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.80 E-value=1.3e-18 Score=177.99 Aligned_cols=278 Identities=15% Similarity=0.080 Sum_probs=168.9
Q ss_pred ccccccccccc--chhhhhhhhhccCcccccchhchhhhhHHHHHHHHHhhcccc----c--hHHHHHHHHHHHHHHHHH
Q psy15864 89 KGTFLYKMAAP--LVLVLTYVAEITQPHLRGMLSATASMTTIFGTVSQLFLGSFL----H--WRSAAILNLLFPILALCA 160 (553)
Q Consensus 89 ~gr~~~G~ga~--~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~lG~~l~~~l~~~l----g--Wr~~f~i~~i~~li~~i~ 160 (553)
-.|++.|++.+ .+...+++.|++|+++|+++.++..++..+|.++++.++..+ + ||+.|++.+++.++.++.
T Consensus 105 ~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~~~~~~ 184 (405)
T TIGR00891 105 IARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVVPVWGDGWRALFFISILPIIFALWL 184 (405)
T ss_pred HHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHH
Confidence 46788888654 456778999999999999999999999999999988877654 4 999999987777776666
Q ss_pred hccccCCceeeeecCChHHHHHHHHHHcCCCCCcchHHHHHHHHHHHHHHHHHhcCCCCCCChhhhhhhh-hcchhHHHH
Q psy15864 161 LYFIPESPHWLISQGRMQEASASLCWLRGWVTPDKVQTELSQITKAIEESELKRLGKDGQRRPNYRMYMR-RTFLLPYAI 239 (553)
Q Consensus 161 ~~~lpEsp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 239 (553)
...+||++++...+.+.+.......+.... .+....... ........ ....+..+.
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~ 241 (405)
T TIGR00891 185 RKNIPEAEDWKEKHAGKALVRTMVDILYGG--EHRIANIVM---------------------TLAAAMVQSAGKRWPTFV 241 (405)
T ss_pred HHhCCCChhHHHHhhhhhhhhhHHHHHhcc--chhhhhhhh---------------------hhhHHhhhhhhhhhHHHH
Confidence 667899875432111111111111111000 000000000 00000000 001111111
Q ss_pred HHHHHHHHhhhhhHHHHhhHHHHHH-hhCCCCC-hHHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHHHH
Q psy15864 240 VTSLFFIGQFGGMTTLQTYAVGIFE-SIHAPLD-PYFATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAACFIVV 317 (553)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~-~~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~ 317 (553)
...+..............++|.++. ..+.+.. ..+......++.+++.++.|+++||+|||+.+.++.++..+..+..
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~ 321 (405)
T TIGR00891 242 YLVVLVLFANLYSHPIQDLLPTYLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWLGRRKAYVCSLLAGQLLIIPV 321 (405)
T ss_pred HHHHHHHHHHHHHhhhhhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchhhhHHHHHHHHHHHHHH
Confidence 1111111112222233345555553 3565533 3456667888999999999999999999998877665543322222
Q ss_pred HHHHHhhcccCCCCChhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhHHHHhhcc
Q psy15864 318 AVYAQFHLSYGWDSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYYPMLDTFH 397 (553)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~~~g 397 (553)
... ..+.+.+.+..++.+++.+... ++...+++|.+|++.|++++|+.+.+..+++.++|.+.+.+.+..|
T Consensus 322 ~~~--------~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~~g 392 (405)
T TIGR00891 322 FAI--------GANVAVLGLGLFFQQMLVQGIW-GILPKHLGEYFPTDQRAAGLGFTYQLGNLGGALAPIIGALLAQRLD 392 (405)
T ss_pred HHh--------CCchHHHHHHHHHHHHHHccch-hhHHHHHhhhCCcchhHHHhhHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 111 2333444444444454443333 3334788999999999999999999999999999999999999887
Q ss_pred c
Q psy15864 398 L 398 (553)
Q Consensus 398 ~ 398 (553)
.
T Consensus 393 ~ 393 (405)
T TIGR00891 393 E 393 (405)
T ss_pred c
Confidence 3
No 27
>PRK03545 putative arabinose transporter; Provisional
Probab=99.79 E-value=2.9e-18 Score=174.68 Aligned_cols=269 Identities=16% Similarity=0.122 Sum_probs=170.8
Q ss_pred ccccccccccc--hhhhhhhhhccCcccccchhchhhhhHHHHHHHHHhhcccc----chHHHHHHHHHHHHHHHHHh-c
Q psy15864 90 GTFLYKMAAPL--VLVLTYVAEITQPHLRGMLSATASMTTIFGTVSQLFLGSFL----HWRSAAILNLLFPILALCAL-Y 162 (553)
Q Consensus 90 gr~~~G~ga~~--~~~~~~i~e~~p~~~Rg~~~~~~~~~~~lG~~l~~~l~~~l----gWr~~f~i~~i~~li~~i~~-~ 162 (553)
.|+++|++.+. +...+++.+++|+++|+++++++..+..+|.+++++++..+ |||++|++.++++++..++. .
T Consensus 103 ~r~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~l~~~~~~~ 182 (390)
T PRK03545 103 SRIGIAFAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQYLGWRTTFLAIGGGALITLLLLIK 182 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHH
Confidence 57788877653 46678999999999999999999999999999998887654 99999999998887765443 3
Q ss_pred cccCCceeeeecCChHHHHHHHHHHcCCCCCcchHHHHHHHHHHHHHHHHHhcCCCCCCChhhhhhhhhcchhHHHHHHH
Q psy15864 163 FIPESPHWLISQGRMQEASASLCWLRGWVTPDKVQTELSQITKAIEESELKRLGKDGQRRPNYRMYMRRTFLLPYAIVTS 242 (553)
Q Consensus 163 ~lpEsp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (553)
++|+.|+. .+ .. . ...+..++++..+......+
T Consensus 183 ~~~~~~~~----~~-~~--------------------~----------------------~~~~~~~~~~~~~~~~~~~~ 215 (390)
T PRK03545 183 LLPLLPSE----HS-GS--------------------L----------------------KSLPLLFRRPALVSLYLLTV 215 (390)
T ss_pred hCCCCCCC----Cc-ch--------------------H----------------------HHHHHHHhCcHHHHHHHHHH
Confidence 46765421 00 00 0 00111222222222222211
Q ss_pred HHHHHhhhhhHHHHhhHHHHHHh-hCCCCC-hHHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHHHHHHH
Q psy15864 243 LFFIGQFGGMTTLQTYAVGIFES-IHAPLD-PYFATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAACFIVVAVY 320 (553)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~-~~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~ 320 (553)
+.. ........+.+.++.+ .+.+.. ..+...+.+++.+++.++.|+++||+|||.+ ..+..+..++..++...
T Consensus 216 ~~~----~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~-~~~~~~~~~~~~~l~~~ 290 (390)
T PRK03545 216 VVV----TAHFTAYSYIEPFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRHPSGFL-LIAIALLLVCLLLLLPA 290 (390)
T ss_pred HHH----HHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhccchhHH-HHHHHHHHHHHHHHHHH
Confidence 111 1122223344444443 465544 3456667788999999999999999998764 33333333333222221
Q ss_pred HHhhcccCCCCChhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhHHHHhhccchh
Q psy15864 321 AQFHLSYGWDSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYYPMLDTFHLWG 400 (553)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~~~g~~~ 400 (553)
..+.+.+++..++.+++.+.. .+....++.+..| +.|++++|+.+.+.+++..+++.+.|.+.+..++..
T Consensus 291 --------~~~~~~~~~~~~l~g~~~~~~-~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~~g~~~ 360 (390)
T PRK03545 291 --------ANSEWHLSVLSIFWGIAIMCI-GLAMQVKVLKLAP-DATDVAMALFSGIFNIGIGAGALLGNQVSLHLGLSS 360 (390)
T ss_pred --------hchHHHHHHHHHHHHHHHhcc-hHHHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChhH
Confidence 233444555555555554322 2223366677766 578999999999999999999999999999998877
Q ss_pred hHHHHHHHHHHHHhhheEEc
Q psy15864 401 TLYFYAAISVVGTLYMYFVM 420 (553)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~ 420 (553)
.+.+.+++.++.+++.+..+
T Consensus 361 ~~~~~~~~~~~~~~~~~~~~ 380 (390)
T PRK03545 361 IGYVGAALALAALVWSILIF 380 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHc
Confidence 77777666666665554433
No 28
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.78 E-value=2.5e-18 Score=175.17 Aligned_cols=267 Identities=15% Similarity=0.168 Sum_probs=169.3
Q ss_pred ccccccccccc--chhhhhhhhhccCcccccchhchhhhhHHHHHHHHHhhcc------------ccchHHHHHHHHHHH
Q psy15864 89 KGTFLYKMAAP--LVLVLTYVAEITQPHLRGMLSATASMTTIFGTVSQLFLGS------------FLHWRSAAILNLLFP 154 (553)
Q Consensus 89 ~gr~~~G~ga~--~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~lG~~l~~~l~~------------~lgWr~~f~i~~i~~ 154 (553)
-.|+++|++.+ .+...+++.|++|+++|+++.++...+..+|.+++++++. ..+||++|++.+++.
T Consensus 101 ~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~ 180 (394)
T TIGR00883 101 LARLIQGFSLGGEWGGAALYLAEYAPPGKRGFYGSFQQVGAPVGLLLAALTVLLLSYLLGDDALLEWGWRIPFLVSAVLV 180 (394)
T ss_pred HHHHHHHhhccccccccHHHhhhcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhhccchHHHHHHHHHHH
Confidence 35888888754 4567889999999999999999999999999998887642 238999999988877
Q ss_pred HHHHHHhccccCCceeeeecCChHHHHHHHHHHcCCCCCcchHHHHHHHHHHHHHHHHHhcCCCCCCChhhhhhhhhcch
Q psy15864 155 ILALCALYFIPESPHWLISQGRMQEASASLCWLRGWVTPDKVQTELSQITKAIEESELKRLGKDGQRRPNYRMYMRRTFL 234 (553)
Q Consensus 155 li~~i~~~~lpEsp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (553)
++++++...+||+|++...+++ . ...........+++.
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~----------------------------------------~-~~~~~~~~~~~~~~~- 218 (394)
T TIGR00883 181 LIGLYLRRNLEETPVFEKAQEK----------------------------------------H-KKKRGPIRETLTKHR- 218 (394)
T ss_pred HHHHHHHHhcCCChhHHHHHhc----------------------------------------c-ccccCCHHHHHHhch-
Confidence 7766666667877642100000 0 000011122222211
Q ss_pred hHHHHHHHHHHHHhhhhhHHHHhhHHHHH-HhhCCCCC-hHHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHH
Q psy15864 235 LPYAIVTSLFFIGQFGGMTTLQTYAVGIF-ESIHAPLD-PYFATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAA 312 (553)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~-~~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i 312 (553)
++. +...+..+...........+.|.++ ...+.+.. ......+..++.+++.+++|+++||+|||+.+..+..+..+
T Consensus 219 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~ 297 (394)
T TIGR00883 219 KPF-LLGLGLVIATTTTFYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLAAL 297 (394)
T ss_pred HHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHH
Confidence 112 2222223333334455566777776 34555443 33556677788899999999999999999877654444333
Q ss_pred HH-HHHHHHHHhhcccCCCCChhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHH-HHHHHHHHHHHhH
Q psy15864 313 CF-IVVAVYAQFHLSYGWDSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSS-SYIFAFAVNKLYY 390 (553)
Q Consensus 313 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~-~~~~~~i~~~~~~ 390 (553)
.. .++..... ..+.+..++..++.+++.+....+. .++++|.+|++.|+++.++...+ ..+++.++|.+.+
T Consensus 298 ~~~~~~~~~~~------~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g 370 (394)
T TIGR00883 298 LAVPLLMALLD------SGSFTLFFFLVLGLALIGGMYTGPM-GSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAA 370 (394)
T ss_pred HHHHHHHHHhc------CCchHHHHHHHHHHHHHHHHHhhhH-HHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHH
Confidence 32 22211110 2344444555555666555555444 58899999999999999985444 5577889999999
Q ss_pred HHHhhccchhhHHHH
Q psy15864 391 PMLDTFHLWGTLYFY 405 (553)
Q Consensus 391 ~~~~~~g~~~~~~~~ 405 (553)
.+.+..+.+....++
T Consensus 371 ~l~~~~g~~~~~~~~ 385 (394)
T TIGR00883 371 ALVAMTGDWYAIGYY 385 (394)
T ss_pred HHHHHcCcchhHHHH
Confidence 999887743333333
No 29
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.78 E-value=4.6e-18 Score=176.47 Aligned_cols=293 Identities=16% Similarity=0.104 Sum_probs=164.6
Q ss_pred ccccccccccc--chhhhhhhhhccCcccccchhchhhhhHHHHHH-HHHhhccc----cchHHHHHHHHHHHHHH-HHH
Q psy15864 89 KGTFLYKMAAP--LVLVLTYVAEITQPHLRGMLSATASMTTIFGTV-SQLFLGSF----LHWRSAAILNLLFPILA-LCA 160 (553)
Q Consensus 89 ~gr~~~G~ga~--~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~lG~~-l~~~l~~~----lgWr~~f~i~~i~~li~-~i~ 160 (553)
-.|++.|++.+ .+....++.+++|+++|+++++++.++..+|.. ++++++.. .+||+.|++.++++++. ++.
T Consensus 125 ~~~~l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~gw~~~f~i~~~~~~~~~~l~ 204 (452)
T PRK11273 125 VLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWFNDWHAALYMPAFAAILVALFA 204 (452)
T ss_pred HHHHHHHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHH
Confidence 34667776544 334557789999999999999999999888864 45543221 29999999988887775 444
Q ss_pred hccccCCceeeeecCChHHHHHHHHHHcCCCCCcchHHHHHHHHHHHHHHHHHhcCCCCCCChhhhhh-hhhcchhHHHH
Q psy15864 161 LYFIPESPHWLISQGRMQEASASLCWLRGWVTPDKVQTELSQITKAIEESELKRLGKDGQRRPNYRMY-MRRTFLLPYAI 239 (553)
Q Consensus 161 ~~~lpEsp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 239 (553)
.+++||+|+....+. .++... .. .. .. ...... ....... .......+.++
T Consensus 205 ~~~~~~~~~~~~~~~-~~~~~~---~~------~~--------------~~---~~~~~~-~~~~~~~~~~~~~~~~~~~ 256 (452)
T PRK11273 205 FAMMRDTPQSCGLPP-IEEYKN---DY------PD--------------DY---NEKHEQ-ELTAKQIFMQYVLPNKLLW 256 (452)
T ss_pred HHHccCCHhhcCCCC-hhhhhh---cc------cc--------------cc---ccccCC-CccHHHHHHHHHHcChHHH
Confidence 556788875311000 000000 00 00 00 000000 0001111 11111122233
Q ss_pred HHHHHHHHhhhhhHHHHhhHHHHHHh-hCCCC-ChHHHHHHHHHHHHHHHHHHhhhhccc--CCcceeec-chhHHHHHH
Q psy15864 240 VTSLFFIGQFGGMTTLQTYAVGIFES-IHAPL-DPYFATLLLGVAELGGALLCVVLIHYT--GKRPLALI-STGGSAACF 314 (553)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~-~~~~~~~~~~i~~~~g~~~~g~l~dr~--Grr~~l~~-~~~~~~i~~ 314 (553)
...+..+......+.+..|+|.++++ .+++. ...+...+..++.+++.+++|+++||+ +||....+ .+.+..++.
T Consensus 257 ~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~~l~~~~~ 336 (452)
T PRK11273 257 YIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIAT 336 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHHHHHHHHHH
Confidence 33333333333445566788888865 46553 334556677788899999999999999 44443221 112222222
Q ss_pred HHHHHHHHhhcccCCCCChhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHHH-HHHHhHHHH
Q psy15864 315 IVVAVYAQFHLSYGWDSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFA-VNKLYYPML 393 (553)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i-~~~~~~~~~ 393 (553)
+++.+.. ..+.+..++..++.+.+..... ....+++.|.+|++.||+++|+.+.+..+++.+ +|.+.+.+.
T Consensus 337 ~~~~~~~-------~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~ 408 (452)
T PRK11273 337 IVYWLNP-------AGNPTVDMACMIVIGFLIYGPV-MLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTV 408 (452)
T ss_pred HHHHHhc-------ccChHHHHHHHHHHHHHHHhHH-HHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHH
Confidence 2211100 1222333333333333221111 122256679999999999999999988888765 688999999
Q ss_pred hhccchhhHHHHHHHHHHHHhhhe
Q psy15864 394 DTFHLWGTLYFYAAISVVGTLYMY 417 (553)
Q Consensus 394 ~~~g~~~~~~~~~~~~~~~~~~~~ 417 (553)
+..++...+.+.++++++.+++.+
T Consensus 409 ~~~g~~~~f~~~~~~~~~~~~~~~ 432 (452)
T PRK11273 409 DFFGWDGGFMVMIGGSILAVILLI 432 (452)
T ss_pred HHhcchHHHHHHHHHHHHHHHHHH
Confidence 988877777766666555554443
No 30
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.78 E-value=3.8e-18 Score=174.45 Aligned_cols=269 Identities=18% Similarity=0.139 Sum_probs=173.0
Q ss_pred cccccccccccc--hhhhhhhhhccCcccccchhchhhhhHHHHHHHHHhhcccc----chHHHHHHHHHHHHHHHHHhc
Q psy15864 89 KGTFLYKMAAPL--VLVLTYVAEITQPHLRGMLSATASMTTIFGTVSQLFLGSFL----HWRSAAILNLLFPILALCALY 162 (553)
Q Consensus 89 ~gr~~~G~ga~~--~~~~~~i~e~~p~~~Rg~~~~~~~~~~~lG~~l~~~l~~~l----gWr~~f~i~~i~~li~~i~~~ 162 (553)
-.|+++|++.+. +...+++.|++|+++|++++++...+..+|.++++.++..+ |||+.+++.++++++.+++..
T Consensus 117 ~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~ 196 (399)
T PRK05122 117 LGRLLLGIGESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAIGAPLGVLLYHWGGLAGLGLLIMLLALLGLLLAR 196 (399)
T ss_pred HHHHHHHhhHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHh
Confidence 367888887653 45567789999999999999999888888888877776654 999999887777665554444
Q ss_pred cccCCceeeeecCChHHHHHHHHHHcCCCCCcchHHHHHHHHHHHHHHHHHhcCCCCCCChhhhhhhhhcchhHHHHHHH
Q psy15864 163 FIPESPHWLISQGRMQEASASLCWLRGWVTPDKVQTELSQITKAIEESELKRLGKDGQRRPNYRMYMRRTFLLPYAIVTS 242 (553)
Q Consensus 163 ~lpEsp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (553)
..|+++.- +.+. ..+....++.... .....
T Consensus 197 ~~~~~~~~---~~~~---------------------------------------------~~~~~~~~~~~~~--~~~~~ 226 (399)
T PRK05122 197 PRPAVPPV---KGER---------------------------------------------LPFRRVLGRVWPY--GMGLA 226 (399)
T ss_pred cCCCCCCC---Cccc---------------------------------------------hhHHHHHHHHHHH--HHHHH
Confidence 34443210 0000 0000000000000 01111
Q ss_pred HHHHHhhhhhHHHHhhHHHHHHhhCCCCChHHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHHHHHHHHH
Q psy15864 243 LFFIGQFGGMTTLQTYAVGIFESIHAPLDPYFATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAACFIVVAVYAQ 322 (553)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~ 322 (553)
+ ..........+.+.++.+.+.. ...+......++.+++.++.|++.||+|+|+.+.++.++.+++.+++..
T Consensus 227 ~----~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~--- 298 (399)
T PRK05122 227 L----ASIGFGTIATFITLYYAARGWD-GAALALTLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLLWL--- 298 (399)
T ss_pred H----HHHHHHHHHHHHHHHHHHcccc-cchHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHH---
Confidence 1 1112223334555555554542 3344556677888899999999999999999887777766666655544
Q ss_pred hhcccCCCCChhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhHHHHhhccchhhH
Q psy15864 323 FHLSYGWDSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYYPMLDTFHLWGTL 402 (553)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~~~g~~~~~ 402 (553)
.++.+..++..++.+++.+...... ...+.+.+|++.||++.|+.+....+++.+++.+.+.+.+..++...+
T Consensus 299 ------~~~~~~~~~~~~l~G~~~~~~~~~~-~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~ 371 (399)
T PRK05122 299 ------APSPWMALIGAALTGFGFSLVFPAL-GVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAGLVASWFGYPSIF 371 (399)
T ss_pred ------hccHHHHHHHHHHHHHhHHHHHHHH-HHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHH
Confidence 3344555556666676665544333 356678899999999999999999999999999999998888876666
Q ss_pred HHHHHHHHHHHhhheEEcccC
Q psy15864 403 YFYAAISVVGTLYMYFVMPET 423 (553)
Q Consensus 403 ~~~~~~~~~~~~~~~~~~pet 423 (553)
.+.+++.++..++.+ ++++.
T Consensus 372 ~~~~~~~~~~~~~~~-~~~~~ 391 (399)
T PRK05122 372 LAAALAALLGLALTW-LLYRR 391 (399)
T ss_pred HHHHHHHHHHHHHHH-Hhccc
Confidence 666665555554443 34443
No 31
>PRK12382 putative transporter; Provisional
Probab=99.78 E-value=9.6e-18 Score=171.02 Aligned_cols=266 Identities=17% Similarity=0.105 Sum_probs=174.1
Q ss_pred cccccccccccc--hhhhhhhhhccCcccccchhchhhhhHHHHHHHHHhhcccc----chHHHHHHHHHHHHHHHHHhc
Q psy15864 89 KGTFLYKMAAPL--VLVLTYVAEITQPHLRGMLSATASMTTIFGTVSQLFLGSFL----HWRSAAILNLLFPILALCALY 162 (553)
Q Consensus 89 ~gr~~~G~ga~~--~~~~~~i~e~~p~~~Rg~~~~~~~~~~~lG~~l~~~l~~~l----gWr~~f~i~~i~~li~~i~~~ 162 (553)
-+|+++|++.+. +...+++.|++|+++|++++++++.+..+|.++++.++..+ |||+.+++..++.++.++...
T Consensus 117 ~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~ 196 (392)
T PRK12382 117 VGRLILGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLGLLLHSHFGFAALALTTMVLPLLAWAFNG 196 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHHHH
Confidence 468889988763 34557889999999999999999998888888888877654 999988876665554444333
Q ss_pred cccCCceeeeecCChHHHHHHHHHHcCCCCCcchHHHHHHHHHHHHHHHHHhcCCCCCCChhhhhhhhhcchhHHHHHHH
Q psy15864 163 FIPESPHWLISQGRMQEASASLCWLRGWVTPDKVQTELSQITKAIEESELKRLGKDGQRRPNYRMYMRRTFLLPYAIVTS 242 (553)
Q Consensus 163 ~lpEsp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (553)
..||.+.. +++ ... .. ...+.+. ...+ ..+
T Consensus 197 ~~~~~~~~---~~~----------------~~~----~~---------------------~~~~~~~-----~~~~-~~~ 226 (392)
T PRK12382 197 TVRKVPAH---AGE----------------RPS----LW---------------------SVVGLIW-----KPGL-GLA 226 (392)
T ss_pred hccCCCCC---ccc----------------Cch----HH---------------------HHHHHHH-----HhHH-HHH
Confidence 34543210 000 000 00 0000000 0001 111
Q ss_pred HHHHHhhhhhHHHHhhHHHHHHhhCCCCChHHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHHHHHHHHH
Q psy15864 243 LFFIGQFGGMTTLQTYAVGIFESIHAPLDPYFATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAACFIVVAVYAQ 322 (553)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~ 322 (553)
+ ..........+.+.++.+.+.+ .........+++.+++.++.|++.||+|+|+.+.++..+.+++.+++..
T Consensus 227 l----~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~--- 298 (392)
T PRK12382 227 L----QGVGFAVIGTFVSLYFASKGWA-MAGFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLWL--- 298 (392)
T ss_pred H----HHHHHhHHHHHHHHHHHhcCCc-hhHHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHHH---
Confidence 1 1112223344555555555543 2334455567778889999999999999999988887777777665544
Q ss_pred hhcccCCCCChhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhHHHHhhccchhhH
Q psy15864 323 FHLSYGWDSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYYPMLDTFHLWGTL 402 (553)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~~~g~~~~~ 402 (553)
..+.+..++..++.+++.+...... .+.+.+.+|++.||++.|+.+....+++.++|.+.+.+.+..++...+
T Consensus 299 ------~~~~~~~~~~~~l~g~~~~~~~~~~-~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~ 371 (392)
T PRK12382 299 ------APTAWVALAGAALTGAGCSLIFPAL-GVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLATSFGYPSVF 371 (392)
T ss_pred ------cccHHHHHHHHHHHHHHHHhHHHHH-HHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHH
Confidence 3344555555666666555444333 367788899999999999999999999999999999999988877777
Q ss_pred HHHHHHHHHHHhhheEE
Q psy15864 403 YFYAAISVVGTLYMYFV 419 (553)
Q Consensus 403 ~~~~~~~~~~~~~~~~~ 419 (553)
.+.+++.++..++.+++
T Consensus 372 ~~~~~~~~~~~~~~~~~ 388 (392)
T PRK12382 372 LAGAISAVLGIIVTILS 388 (392)
T ss_pred HHHHHHHHHHHHHHHhh
Confidence 77766666655555443
No 32
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.78 E-value=4.4e-18 Score=173.29 Aligned_cols=297 Identities=16% Similarity=0.127 Sum_probs=174.6
Q ss_pred ccccccccccc--chhhhhhhhhccCcccccchhchhhhhHHHHHHHHHhhcccc----chHHHHHHHHHHHHHHHHHhc
Q psy15864 89 KGTFLYKMAAP--LVLVLTYVAEITQPHLRGMLSATASMTTIFGTVSQLFLGSFL----HWRSAAILNLLFPILALCALY 162 (553)
Q Consensus 89 ~gr~~~G~ga~--~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~lG~~l~~~l~~~l----gWr~~f~i~~i~~li~~i~~~ 162 (553)
-.|+++|++.+ .+...+++.|++|+++|++++++...+..+|.++++.+++.+ +||+.|++.++++++..++.+
T Consensus 87 ~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (399)
T TIGR00893 87 ILRVLLGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHFSWQWAFIIEGVLGIIWGVLWL 166 (399)
T ss_pred HHHHHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhh
Confidence 35777777654 456678999999999999999999999999999998887764 999999999888877655444
Q ss_pred -cccCCceeeeecCChHHHHHHHHHHcCCCCCcchHHHHHHHHHHHHHHHHHhcCCCCCCChhhhhhhhhcchhHHHHHH
Q psy15864 163 -FIPESPHWLISQGRMQEASASLCWLRGWVTPDKVQTELSQITKAIEESELKRLGKDGQRRPNYRMYMRRTFLLPYAIVT 241 (553)
Q Consensus 163 -~lpEsp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (553)
++||+|+.... ...++.......... .. ................++.+ .++..
T Consensus 167 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~--------------------~~-~~~~~~~~~~~~~~~~~~~~----~~~~~ 220 (399)
T TIGR00893 167 KFIPDPPQKAKW-LTEEEKYIVVGGLLA--------------------EQ-QGKGPSTPKKYQIKELLKDR----RVWGL 220 (399)
T ss_pred heecCCCCcccc-CCHHHHhhcchhhcc--------------------cc-ccccccCCCccchHHHhcCH----HHHHH
Confidence 46666532100 000000000000000 00 00000001111122222222 22233
Q ss_pred HHHHHHhhhhhHHHHhhHHHHHHh-hCCCC-ChHHHHHHHHHHHHHHHHHHhhhhcccCCcceeecch-hHHHHHHHHHH
Q psy15864 242 SLFFIGQFGGMTTLQTYAVGIFES-IHAPL-DPYFATLLLGVAELGGALLCVVLIHYTGKRPLALIST-GGSAACFIVVA 318 (553)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~-~~~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~-~~~~i~~~~~~ 318 (553)
.+..+........+..+.|.++.+ .+.+. +..+...+..++.+++.+++|+++||++||+..+... ....++.++..
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (399)
T TIGR00893 221 ALGQFLVNIGLGFFLTWFPTYLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLLLRRGKSLVFARKTAIIAGLVLS 300 (399)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHH
Confidence 333344444455566677776643 45543 3346666778889999999999999999996322221 12222211111
Q ss_pred HHHHhhcccCCCCChhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhHHHHhhcc-
Q psy15864 319 VYAQFHLSYGWDSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYYPMLDTFH- 397 (553)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~~~g- 397 (553)
....... ........+...+.+++. .+..+..+++++|.+|++.|+++.|+.+.+..+++.++|.+.+.+.+..+
T Consensus 301 ~~~~~~~---~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~~g~ 376 (399)
T TIGR00893 301 LLMFATN---YVNIPYAALALVALGFFG-LGAGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIGAIAATTGS 376 (399)
T ss_pred HHHHHhc---cchhHHHHHHHHHHHHhc-hhhhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHhhhhccCCCc
Confidence 1111000 111222222222333322 22456667899999999999999999999999999999999999998877
Q ss_pred chhhHHHHHHHHHHHHhh
Q psy15864 398 LWGTLYFYAAISVVGTLY 415 (553)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~ 415 (553)
+...+.+.+++.++..++
T Consensus 377 ~~~~~~~~~~~~~~~~~~ 394 (399)
T TIGR00893 377 FAGALMVVAALALIGALS 394 (399)
T ss_pred hhHHHHHHHHHHHHHHHH
Confidence 555555555555544443
No 33
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.77 E-value=5e-18 Score=175.52 Aligned_cols=304 Identities=16% Similarity=0.106 Sum_probs=175.1
Q ss_pred ccccccccccc--chhhhhhhhhccCcccccchhchhhhhHHHHHHHHHhhccc-----cchHHHHHHHHHHHHHHH-HH
Q psy15864 89 KGTFLYKMAAP--LVLVLTYVAEITQPHLRGMLSATASMTTIFGTVSQLFLGSF-----LHWRSAAILNLLFPILAL-CA 160 (553)
Q Consensus 89 ~gr~~~G~ga~--~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~lG~~l~~~l~~~-----lgWr~~f~i~~i~~li~~-i~ 160 (553)
-.|++.|++.+ .+....++.|++|+++||+++++++++..+|..+++.+... .+||+.|++.+++++++. +.
T Consensus 123 ~~~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~w~~~f~~~~~~~~i~~~~~ 202 (438)
T TIGR00712 123 VLLFLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAWFNDWHAALYFPAICAIIVALFA 202 (438)
T ss_pred HHHHHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHH
Confidence 34666666543 34566788999999999999999999999988887755432 289999999988887764 44
Q ss_pred hccccCCceeeeecCChHHHHHHHHHHcCCCCCcchHHHHHHHHHHHHHHHHHhcCCCCCCChhhhhhhhhcchhHHHHH
Q psy15864 161 LYFIPESPHWLISQGRMQEASASLCWLRGWVTPDKVQTELSQITKAIEESELKRLGKDGQRRPNYRMYMRRTFLLPYAIV 240 (553)
Q Consensus 161 ~~~lpEsp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (553)
++++||+|+....+...+. +.. ....... .. ...........+..++.+ .++.
T Consensus 203 ~~~~~~~~~~~~~~~~~~~--------~~~-~~~~~~~-----------~~---~~~~~~~~~~~~~~~~~~----~~~~ 255 (438)
T TIGR00712 203 FAMMRDTPQSCGLPPIEEY--------RND-YPDDYNE-----------KA---EQELTAKEIFMQYVLPNK----LLWY 255 (438)
T ss_pred HHhccCCHHhcCCCCchhc--------ccc-ccccccc-----------cc---ccccchHHHHHHHHccCc----hHHH
Confidence 5557887653110000000 000 0000000 00 000000000011122222 2222
Q ss_pred HHHHHHHhhhhhHHHHhhHHHHHHh-hCCCCC-hHHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHHHHH
Q psy15864 241 TSLFFIGQFGGMTTLQTYAVGIFES-IHAPLD-PYFATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAACFIVVA 318 (553)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~-~~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~ 318 (553)
..+..++.+...+.+..|.|.+++. .|++.. ..+..++..++.+++.+++|+++||+++++....+..+..+..+...
T Consensus 256 ~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~ 335 (438)
T TIGR00712 256 IAIANVFVYLLRYGVLDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFKGNRGATGVFFMTLVTIAVI 335 (438)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccHHHHHHHHHHHHHHH
Confidence 2222333334445566788888765 465433 34666778888999999999999999754433333322222211111
Q ss_pred HHHHhhcccCCCCChhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHH-HHHHHHhHHHHhhcc
Q psy15864 319 VYAQFHLSYGWDSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFA-FAVNKLYYPMLDTFH 397 (553)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~-~i~~~~~~~~~~~~g 397 (553)
.+.. . ...+.+..++..++.+++.. +........+.|.+|++.||+++|+.+.++++++ +++|.+.|.+.+..+
T Consensus 336 ~~~~--~--~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~gp~l~G~l~~~~g 410 (438)
T TIGR00712 336 VYWM--N--PAGNPLVDMICMIVIGFLIY-GPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFG 410 (438)
T ss_pred HHHh--c--CCCchHHHHHHHHHHHHHHc-cHHHHHHHHHHHhcChhheeeehhhhchHHHhhhhhhcchhHHHHHHhcc
Confidence 1110 0 01222333233333333211 1111112456799999999999999998888875 678999999999888
Q ss_pred chhhHHHHHHHHHHHHhhheEEcccCC
Q psy15864 398 LWGTLYFYAAISVVGTLYMYFVMPETE 424 (553)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~pet~ 424 (553)
+...+.+.+++.++..++.++++||.+
T Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (438)
T TIGR00712 411 WDGGFMVMIGGSILAVILLIVVMIGEK 437 (438)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 777777777777777777777788754
No 34
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.77 E-value=2e-18 Score=181.71 Aligned_cols=312 Identities=16% Similarity=0.053 Sum_probs=171.8
Q ss_pred cccccccccccc--chhhhhhhhhccCcccccchhchhhhhHHHHHHHHHhhcccc----chHHHHHHHHHHHHHHHHHh
Q psy15864 88 EKGTFLYKMAAP--LVLVLTYVAEITQPHLRGMLSATASMTTIFGTVSQLFLGSFL----HWRSAAILNLLFPILALCAL 161 (553)
Q Consensus 88 ~~gr~~~G~ga~--~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~lG~~l~~~l~~~l----gWr~~f~i~~i~~li~~i~~ 161 (553)
--.|++.|++.+ .+...+++.|++|+++|+++++++.++..+|.++++.++..+ +||+.|++.+++.++.+++.
T Consensus 112 ~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~f~~~~~~~~~~~~~~ 191 (496)
T PRK03893 112 FIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLVVPVWGWRALFFIGILPIIFALWLR 191 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHH
Confidence 345778887654 456678899999999999999999999999999998877654 89999998766555555555
Q ss_pred ccccCCceeeeecCChHHHHHHHHHHcCCCCCcchHHHHHHHHHHHHHHHHHhcCCCCCCCh---------hhhhh--hh
Q psy15864 162 YFIPESPHWLISQGRMQEASASLCWLRGWVTPDKVQTELSQITKAIEESELKRLGKDGQRRP---------NYRMY--MR 230 (553)
Q Consensus 162 ~~lpEsp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~--~~ 230 (553)
..+||++++...+.+.............. ....... ........................ .+..+ ..
T Consensus 192 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (496)
T PRK03893 192 KNLPEAEDWKEKHAGKAPVRTMVDILYRG-EHRIINI-LLTLAAAAALWFCFAGNLQNAAIVAVLGLLCAAIFISFMVQS 269 (496)
T ss_pred HhCCCchhhhhhccccccchhHHHHHhcc-hhHHHHH-HHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHHHHHh
Confidence 56788765422111111101100000000 0000000 000000000000000000000000 00000 00
Q ss_pred hcchhHHHHHHHHHHHHhhhhhHHHHhhHHHHHH-hhCCCCC-hHHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchh
Q psy15864 231 RTFLLPYAIVTSLFFIGQFGGMTTLQTYAVGIFE-SIHAPLD-PYFATLLLGVAELGGALLCVVLIHYTGKRPLALISTG 308 (553)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~-~~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~ 308 (553)
....++......+..+..+........++|.++. ..|.+.. ..+..++..++.+++.+++|+++||+|||++++++.+
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~ 349 (496)
T PRK03893 270 SGKRWPTGVMLMVVVLFAFLYSWPIQALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTRKAYVCSLL 349 (496)
T ss_pred cccchhHHHHHHHHHHHHHhccchHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHH
Confidence 0011111111111112222222234567777774 5666543 3466777889999999999999999999988776655
Q ss_pred HHHHHHHHHHHHHHhhcccCCCCChhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHHHHHHH
Q psy15864 309 GSAACFIVVAVYAQFHLSYGWDSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKL 388 (553)
Q Consensus 309 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~ 388 (553)
+..++.+++.... ..+.+...+..++.+++ +.+..++..++++|.+|++.||+++|+.+.+..+++.++|.+
T Consensus 350 ~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l 421 (496)
T PRK03893 350 ISQLLIIPVFAIG-------GANVWVLGLLLFFQQML-GQGISGLLPKLIGGYFDTEQRAAGLGFTYNVGALGGALAPIL 421 (496)
T ss_pred HHHHHHHHHhhcc-------ccHHHHHHHHHHHHHHH-hcccchhhHHHHHhhCCHHHhhcccchhhhhhhHHHHHHHHH
Confidence 5444443332210 11112222222222222 223333444788899999999999999999999999999999
Q ss_pred hHHHHhhccchhhHHHHHHHH
Q psy15864 389 YYPMLDTFHLWGTLYFYAAIS 409 (553)
Q Consensus 389 ~~~~~~~~g~~~~~~~~~~~~ 409 (553)
.+.+.+..++...+...++++
T Consensus 422 ~g~l~~~~g~~~~~~~~~~~~ 442 (496)
T PRK03893 422 GALIAQRLDLGTALASLSFSL 442 (496)
T ss_pred HHHHhccCChHHHHHHHHHHH
Confidence 999998888665554444333
No 35
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.77 E-value=9.7e-18 Score=169.71 Aligned_cols=269 Identities=14% Similarity=0.008 Sum_probs=166.3
Q ss_pred ccccccccccc--hhhhhhhhhccCcccccchhchhhhhHHHHHHHHHhhcccc----chHHHHHHHHHHHHHHHHHhc-
Q psy15864 90 GTFLYKMAAPL--VLVLTYVAEITQPHLRGMLSATASMTTIFGTVSQLFLGSFL----HWRSAAILNLLFPILALCALY- 162 (553)
Q Consensus 90 gr~~~G~ga~~--~~~~~~i~e~~p~~~Rg~~~~~~~~~~~lG~~l~~~l~~~l----gWr~~f~i~~i~~li~~i~~~- 162 (553)
.|++.|++.+. +....++.+++| ++|++++++...+..+|.++++.+...+ +||+.|++.++++++..+..+
T Consensus 97 ~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~ 175 (377)
T TIGR00890 97 TYGLASAGVGIAYGIALNTAVKWFP-DKRGLASGIIIGGYGLGSFILSPLITSVINLEGVPAAFIYMGIIFLLVIVLGAF 175 (377)
T ss_pred HHHHHhHHHHHHHHhHHHHHHHHcC-cccHHHHHHHHHhcchhHhHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHH
Confidence 46677776543 345567788887 6799999999999999987655443332 899999999988877755544
Q ss_pred cccCCceeeeecCChHHHHHHHHHHcCCCCCcchHHHHHHHHHHHHHHHHHhcCCCCCCChhhhhhhhhcchhHHHHHHH
Q psy15864 163 FIPESPHWLISQGRMQEASASLCWLRGWVTPDKVQTELSQITKAIEESELKRLGKDGQRRPNYRMYMRRTFLLPYAIVTS 242 (553)
Q Consensus 163 ~lpEsp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (553)
+++++|+.. .+.+. .... .........+++..+...+.
T Consensus 176 ~~~~~~~~~-~~~~~--------------~~~~-------------------------~~~~~~~~~~~~~~~~~~~~-- 213 (377)
T TIGR00890 176 LIGYPPGQL-IKTNI--------------EVSV-------------------------KDYTVWEMLRTPQFWVLYLS-- 213 (377)
T ss_pred heecCchhc-cccCc--------------ccch-------------------------hhhhHHHHHcCccHHHHHHH--
Confidence 455443210 00000 0000 00011112222222211111
Q ss_pred HHHHHhhhhhHHHHhhHHHHHHhhCCCCC-hHHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHHHHHHHH
Q psy15864 243 LFFIGQFGGMTTLQTYAVGIFESIHAPLD-PYFATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAACFIVVAVYA 321 (553)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~ 321 (553)
.+...........+.+.+.+..+.+.. ......+..++.+++.+++|+++||+|||+.+.++.++.+++.+++....
T Consensus 214 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~ 291 (377)
T TIGR00890 214 --FFLNAVSGLLLIGLYKPYGQSLGLSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAVGMAAMLFIP 291 (377)
T ss_pred --HHHHhHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHcc
Confidence 111112222233344445555565433 33566678888999999999999999999998888777777766554421
Q ss_pred HhhcccCCCCChhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhHHHHhhccchhh
Q psy15864 322 QFHLSYGWDSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYYPMLDTFHLWGT 401 (553)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~~~g~~~~ 401 (553)
....+..+...++.+++.+...... ..+++|.+|++.|+++.|+.+....+++.++|.+.+.+.+..++...
T Consensus 292 -------~~~~~~~~~~~~~~g~~~g~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~ 363 (377)
T TIGR00890 292 -------MLNDVLFLATVALVFFTWGGTISLF-PSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALTEIGFEYT 363 (377)
T ss_pred -------cchhHHHHHHHHHHHHHhccchhcc-HHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHhhhchhhH
Confidence 1122223333444555544443333 47889999999999999999999999999999999999988886666
Q ss_pred HHHHHHHHHH
Q psy15864 402 LYFYAAISVV 411 (553)
Q Consensus 402 ~~~~~~~~~~ 411 (553)
+.+.+++.++
T Consensus 364 f~~~~~~~~~ 373 (377)
T TIGR00890 364 FIVTGAFALT 373 (377)
T ss_pred HHHHHHHHHH
Confidence 6555554444
No 36
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.76 E-value=1.7e-17 Score=168.91 Aligned_cols=276 Identities=13% Similarity=0.054 Sum_probs=173.4
Q ss_pred cccccccccccc--hhhhhhhhhccCcccccchhchhhhhHHHHHHHHHhhcccc-----chHHHHHHHHHHHHHHHHHh
Q psy15864 89 KGTFLYKMAAPL--VLVLTYVAEITQPHLRGMLSATASMTTIFGTVSQLFLGSFL-----HWRSAAILNLLFPILALCAL 161 (553)
Q Consensus 89 ~gr~~~G~ga~~--~~~~~~i~e~~p~~~Rg~~~~~~~~~~~lG~~l~~~l~~~l-----gWr~~f~i~~i~~li~~i~~ 161 (553)
-+|+++|+|.+. +...+++.+++| ++|+++++++.++..+|..+++.++..+ +||+.+.+.+++.++.++.+
T Consensus 102 ~~r~l~Gig~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~~~w~~~~~~~~~~~~~~~~~~ 180 (393)
T PRK09705 102 SSALLGGVGIGIIQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGLGAAITPWLVQHSETWYQTLAWWALPAVVALFAW 180 (393)
T ss_pred HHHHHHHhHHHHHhhhhhHHHHHHcc-ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHH
Confidence 468999998763 455678899987 7899999999887777777776665543 89999877666655444333
Q ss_pred ccc-cCCceeeeecCChHHHHHHHHHHcCCCCCcchHHHHHHHHHHHHHHHHHhcCCCCCCChhhhhhhhhcchhHHHHH
Q psy15864 162 YFI-PESPHWLISQGRMQEASASLCWLRGWVTPDKVQTELSQITKAIEESELKRLGKDGQRRPNYRMYMRRTFLLPYAIV 240 (553)
Q Consensus 162 ~~l-pEsp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (553)
++. ++.|+ .+ + . .. ....+.+.++ + .+.
T Consensus 181 ~~~~~~~~~-----~~--~--------------~----------------------~~---~~~~~~l~~~----~-~~~ 209 (393)
T PRK09705 181 WWQSAREVA-----SS--H--------------K----------------------TT---TTPVRVVFTP----R-AWT 209 (393)
T ss_pred HHHhcCCCc-----cc--c--------------C----------------------CC---cCCcccccCH----h-HHH
Confidence 332 22111 00 0 0 00 0001111111 1 111
Q ss_pred HHHHHHHhhhhhHHHHhhHHHHHHhhCCCCC-hHHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHHHHHH
Q psy15864 241 TSLFFIGQFGGMTTLQTYAVGIFESIHAPLD-PYFATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAACFIVVAV 319 (553)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~ 319 (553)
..+..+....++..+..|+|.++.+.+.+.. ......+.+++.++|.++.+++.||+|||+.+.++..+.+++.+++..
T Consensus 210 l~~~~~~~~~~~~~~~~~lp~~l~~~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l~~~~~~~~~~ 289 (393)
T PRK09705 210 LGVYFGLINGGYASLIAWLPAFYIEIGASAQYSGSLLALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQLVGFCGFIW 289 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHH
Confidence 2222223334455666778888877776544 346677888999999999999999999998888777666666554432
Q ss_pred HHHhhcccCCCCChhHHHHHHHHHHHHhhhhccccceeecccc-ccchhhhhhhHHHHHHHHHHHHHHHHhHHHHhhccc
Q psy15864 320 YAQFHLSYGWDSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVF-PNNIRATASGASGSSSYIFAFAVNKLYYPMLDTFHL 398 (553)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~~~g~ 398 (553)
. ..+.... ..++.+++.+..... ......+.+ |++.|++.+|+.+.++.+++.++|.+.+++.+..|.
T Consensus 290 ~--------~~~~~~~--~~~l~g~g~g~~~~~-~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g~ 358 (393)
T PRK09705 290 L--------PLQLPVL--WAMVCGLGLGGAFPL-CLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISGN 358 (393)
T ss_pred c--------cchHHHH--HHHHHHHhccchHHH-HHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 1 1111111 223334444333322 234445655 467899999999999999999999999999998875
Q ss_pred hhh-HHHHHHHHHHHHhhheEEcccCCCCC
Q psy15864 399 WGT-LYFYAAISVVGTLYMYFVMPETEGRT 427 (553)
Q Consensus 399 ~~~-~~~~~~~~~~~~~~~~~~~pet~~~~ 427 (553)
+.. +.+.++++++..++.+.+.||++++.
T Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (393)
T PRK09705 359 YLMDWAFHALCVVGLMIITLRFAPARFPQL 388 (393)
T ss_pred chHHHHHHHHHHHHHHHHHHHhccccccch
Confidence 444 44444555555556677889987654
No 37
>TIGR00895 2A0115 benzoate transport.
Probab=99.75 E-value=1.2e-17 Score=170.56 Aligned_cols=280 Identities=18% Similarity=0.194 Sum_probs=171.6
Q ss_pred ccccccccccc--chhhhhhhhhccCcccccchhchhhhhHHHHHHHHHhhcccc----chHHHHHHHHHHHHHH-HHHh
Q psy15864 89 KGTFLYKMAAP--LVLVLTYVAEITQPHLRGMLSATASMTTIFGTVSQLFLGSFL----HWRSAAILNLLFPILA-LCAL 161 (553)
Q Consensus 89 ~gr~~~G~ga~--~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~lG~~l~~~l~~~l----gWr~~f~i~~i~~li~-~i~~ 161 (553)
-.|++.|++.+ .+...+++.|++|+++|++++++..++..+|.++++.+++.+ +||+.|++.+++.++. ++..
T Consensus 110 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~ 189 (398)
T TIGR00895 110 ILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPVFGWRSLFYVGGIAPLLLLLLLM 189 (398)
T ss_pred HHHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhhcccceeehhhhhhHHHHHHHHHH
Confidence 45777777654 456779999999999999999999999999999988877654 9999999987665555 4455
Q ss_pred ccccCCceeeeecCChHHHHHHHHHHcCCCCCcchHHHHHHHHHHHHHHHHHhcCCCCCCChhhhhhhhhcchhHHHHHH
Q psy15864 162 YFIPESPHWLISQGRMQEASASLCWLRGWVTPDKVQTELSQITKAIEESELKRLGKDGQRRPNYRMYMRRTFLLPYAIVT 241 (553)
Q Consensus 162 ~~lpEsp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (553)
+++||++++...+ +.++..+...........+... ... ............++.+++.+..+... ..
T Consensus 190 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 255 (398)
T TIGR00895 190 RFLPESIDFLVSK-RPETVRRIVNAIAPQMQAEAQS-ALP-----------EQKATQGTKRSVFKALFQGKTARITV-LL 255 (398)
T ss_pred HhCCCCChHHHhc-CHHHHHHHHHHHHHhccccccc-ccc-----------ccccccchhhHHHHHHhcchhHHHHH-HH
Confidence 5689987654333 2222222222211100000000 000 00000000011122222222222222 22
Q ss_pred HHHHHHhhhhhHHHHhhHHHHHHhhCCCCC-hHHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHHHHHHH
Q psy15864 242 SLFFIGQFGGMTTLQTYAVGIFESIHAPLD-PYFATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAACFIVVAVY 320 (553)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~ 320 (553)
.+..+...........+.|.+....+.+.. ......+..++.+++.+++++++||+|||..+ .+..+..+..+++...
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~ 334 (398)
T TIGR00895 256 WLLYFMLLVGVYFLTNWLPKLMVELGFSLSLAATGGALFNFGGVIGSIIFGWLADRLGPRVTA-LLLLLGAVFAVLVGST 334 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHH-HHHHHHHHHHHHHHHH
Confidence 222333344455566677766666666543 34666777889999999999999999998433 3333333322222221
Q ss_pred HHhhcccCCCCChhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhHHH
Q psy15864 321 AQFHLSYGWDSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYYPM 392 (553)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~ 392 (553)
..+.+..++..++.+++.+..... .+++++|.+|++.|+++.|+.+.+..+++.++|.+.|++
T Consensus 335 --------~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 335 --------LFSPTLLLLLGAIAGFFVNGGQSG-LYALMALFYPTAIRATGVGWAIGIGRLGAIIGPILAGYL 397 (398)
T ss_pred --------hhCHHHHHHHHHHHHHHHHHHHHH-HHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHhHHhc
Confidence 224445556666777766655544 458999999999999999999999999999999888864
No 38
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.75 E-value=2.3e-17 Score=169.24 Aligned_cols=274 Identities=12% Similarity=0.034 Sum_probs=172.3
Q ss_pred ccccccccccc-chhhhhhhhhccCcccccchhchhhhhHHHHHHHHHhhcccc----chHHHHHHHHHHHHHHHHHh-c
Q psy15864 89 KGTFLYKMAAP-LVLVLTYVAEITQPHLRGMLSATASMTTIFGTVSQLFLGSFL----HWRSAAILNLLFPILALCAL-Y 162 (553)
Q Consensus 89 ~gr~~~G~ga~-~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~lG~~l~~~l~~~l----gWr~~f~i~~i~~li~~i~~-~ 162 (553)
-.|++.|++.+ .+...+++.+++|+++|++++++..++..+|.++++++++.+ +||+.|++.+++.++..++. +
T Consensus 112 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (408)
T PRK09874 112 ILRALLGLLGGFVPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGGLLADSYGLRPVFFITASVLFLCFLVTLF 191 (408)
T ss_pred HHHHHHHHhhhhHHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHH
Confidence 35677777544 344557788999999999999999999999999888887765 89999999988877665544 4
Q ss_pred cccCCceeeeecCChHHHHHHHHHHcCCCCCcchHHHHHHHHHHHHHHHHHhcCCCCCCChhhhhhhhhcchhHHHHHHH
Q psy15864 163 FIPESPHWLISQGRMQEASASLCWLRGWVTPDKVQTELSQITKAIEESELKRLGKDGQRRPNYRMYMRRTFLLPYAIVTS 242 (553)
Q Consensus 163 ~lpEsp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (553)
+++|.++.. .+.+. .... ..+..+.+++.....+...+
T Consensus 192 ~~~~~~~~~---~~~~~------------------~~~~---------------------~~~~~~~~~~~~~~~~~~~~ 229 (408)
T PRK09874 192 CIRENFQPV---SKKEM------------------LHMR---------------------EVVTSLKNPKLVLSLFVTTL 229 (408)
T ss_pred HhccCcccc---cchhh------------------hHHH---------------------HHHHhCcCCchHHHHHHHHH
Confidence 466653210 00000 0000 00011111111111111111
Q ss_pred HHHHHhhhhhHHHHhhHHHHHHhhCCC-CCh----HHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHHHH
Q psy15864 243 LFFIGQFGGMTTLQTYAVGIFESIHAP-LDP----YFATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAACFIVV 317 (553)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~----~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~ 317 (553)
........+..+.+.+....+.. .+. .....+.+++.+++.++.|+++||+|||+.+.++.++.+++.+.+
T Consensus 230 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~ 305 (408)
T PRK09874 230 ----IIQVATGSIAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIFSVLLLIPM 305 (408)
T ss_pred ----HHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHH
Confidence 11111222233344444332221 111 123344567778888999999999999998887776665555544
Q ss_pred HHHHHhhcccCCCCChhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhHHHHhhcc
Q psy15864 318 AVYAQFHLSYGWDSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYYPMLDTFH 397 (553)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~~~g 397 (553)
.. ..+.+.+++..++.+++.+...... .+++.+..|++.||+.+++.+.+..++..++|.+.+.+.+..+
T Consensus 306 ~~---------~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~g 375 (408)
T PRK09874 306 SF---------VQTPLQLGILRFLLGAADGALLPAV-QTLLVYNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANYG 375 (408)
T ss_pred HH---------hccHHHHHHHHHHHHhhhHhhHHHH-HHHHHHhCCcccceeeehHHHHHHHHHHHhhHHHHHHHHhhcc
Confidence 43 3344555566666676665544333 3666788899999999999999999999999999999988888
Q ss_pred chhhHHHHHHHHHHHHhhheE
Q psy15864 398 LWGTLYFYAAISVVGTLYMYF 418 (553)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~ 418 (553)
+...+.+.+++.++..++.++
T Consensus 376 ~~~~f~~~~~~~l~~~~~~~~ 396 (408)
T PRK09874 376 FRAVFLVTAGVVLFNAVYSWN 396 (408)
T ss_pred hhHHHHHHHHHHHHHHHHHHH
Confidence 777777777666666655544
No 39
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.75 E-value=3.7e-17 Score=170.54 Aligned_cols=295 Identities=11% Similarity=0.030 Sum_probs=171.5
Q ss_pred ccccccccccc--chhhhhhhhhccCcccccchhchhhhhHHHHHHHHHhhcccc-----chHHHHHHHHHHHHHHHHHh
Q psy15864 89 KGTFLYKMAAP--LVLVLTYVAEITQPHLRGMLSATASMTTIFGTVSQLFLGSFL-----HWRSAAILNLLFPILALCAL 161 (553)
Q Consensus 89 ~gr~~~G~ga~--~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~lG~~l~~~l~~~l-----gWr~~f~i~~i~~li~~i~~ 161 (553)
-.|+++|++.+ .+....++.|++|+++|++++++...+..+|.++++++++.+ +||++|++.++++++..+++
T Consensus 136 ~~r~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~ 215 (465)
T TIGR00894 136 FCRVIQGLAQGSVSPATHKIIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLW 215 (465)
T ss_pred HHHHHHHHhcccchhhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHH
Confidence 36778887654 456678999999999999999999999999999888776543 89999999999888776655
Q ss_pred cc-ccCCceeeeecCChHHHHHHHHHHcCCCCCcchHHHHHHHHHHHHHHHHHhcCCCCCCChhhhhhhhhcchhHHHHH
Q psy15864 162 YF-IPESPHWLISQGRMQEASASLCWLRGWVTPDKVQTELSQITKAIEESELKRLGKDGQRRPNYRMYMRRTFLLPYAIV 240 (553)
Q Consensus 162 ~~-lpEsp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (553)
++ .+|+|+.... .+.++. +.+.+.. ............++.++ ..+.++.
T Consensus 216 ~~~~~~~p~~~~~-~~~~~~--------------------~~i~~~~-----~~~~~~~~~~~~~~~~~----~~~~~~~ 265 (465)
T TIGR00894 216 FVFPADDPSIHPC-ISKFEK--------------------KYINSSL-----QGQKGSTRQSLPIKAIP----KSLPVWA 265 (465)
T ss_pred HHHhcCCcccCCC-CCHHHH--------------------HHHHhhc-----ccccCCCCCCCCHHHHh----cCHHHHH
Confidence 54 6677642110 000000 0000000 00000001111233333 2333444
Q ss_pred HHHHHHHhhhhhHHHHhhHHHHHHh-hCCCCC-hHHHHHHHHHHHHHHHHHHhhhhcccCCcceeecc---hhHHHHHHH
Q psy15864 241 TSLFFIGQFGGMTTLQTYAVGIFES-IHAPLD-PYFATLLLGVAELGGALLCVVLIHYTGKRPLALIS---TGGSAACFI 315 (553)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~-~~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~---~~~~~i~~~ 315 (553)
..+..++...+.+.+..|+|.++.+ .+++.. ..+...+..++.+++.+++|+++||+++|+..... .++..++.+
T Consensus 266 ~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~ 345 (465)
T TIGR00894 266 IWFAIFGHFWLYTILPTYLPTFISWVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFLKSSKTLSLTAARKIFNGIGGL 345 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHH
Confidence 5555566666677778889988754 466543 34566677889999999999999998765433211 111111111
Q ss_pred HHHHHHHhhcccCCCCChhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhHHHHhh
Q psy15864 316 VVAVYAQFHLSYGWDSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYYPMLDT 395 (553)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~~ 395 (553)
+......... ....+.+..+++..+.+.+.+... +..+....|..|. .+|++.++.+..+.++++++|.+.+.+.+.
T Consensus 346 ~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~-~~g~~~g~~~~~~~l~~~i~p~l~g~~~~~ 422 (465)
T TIGR00894 346 GPGIFAYALP-YLSAAFYLTIIILTLANAVSSGPL-AGVLINSLDLAPR-FLGFIKGITGLPGFIGGLIASTLAGNILSQ 422 (465)
T ss_pred HHHHHHHHHH-HcCCchHHHHHHHHHHHHHhhhhh-hhhhhchhhcChh-HHHHHHHHHHHHHHHHHHHHHHhhheeeCC
Confidence 1110000000 001222333333333333332222 2223455577765 789999999999999999999999987754
Q ss_pred c--c-chhhHHHHHHHHHHHHhhh
Q psy15864 396 F--H-LWGTLYFYAAISVVGTLYM 416 (553)
Q Consensus 396 ~--g-~~~~~~~~~~~~~~~~~~~ 416 (553)
. + |...+.+.+++.++..++.
T Consensus 423 ~~~~~~~~~f~~~~~~~~i~~i~~ 446 (465)
T TIGR00894 423 DSKNVWLIVFLIMAFVNILCVIFY 446 (465)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHe
Confidence 3 3 3344555554555544443
No 40
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.74 E-value=5.4e-17 Score=162.47 Aligned_cols=249 Identities=24% Similarity=0.230 Sum_probs=189.1
Q ss_pred ccccccccccc--chhhhhhhhhccCcccccchhchhhhhHHHHHHHHHhhcccc----chHHHHHHHHHHHHHHHHHhc
Q psy15864 89 KGTFLYKMAAP--LVLVLTYVAEITQPHLRGMLSATASMTTIFGTVSQLFLGSFL----HWRSAAILNLLFPILALCALY 162 (553)
Q Consensus 89 ~gr~~~G~ga~--~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~lG~~l~~~l~~~l----gWr~~f~i~~i~~li~~i~~~ 162 (553)
-.|++.|++.+ .+...+++.|++|+++|++.+++...+..+|.++++.++..+ +||+.|++.+++.++..++.+
T Consensus 92 ~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (352)
T cd06174 92 VGRFLLGLGGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAESLGWRWLFLILAILGLLLALLLL 171 (352)
T ss_pred HHHHHHHcccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHH
Confidence 35677777654 457779999999999999999999999999999999888776 799999999888877766554
Q ss_pred cccCCceeeeecCChHHHHHHHHHHcCCCCCcchHHHHHHHHHHHHHHHHHhcCCCCCCChhhhhhhhhcchhHHHHHHH
Q psy15864 163 FIPESPHWLISQGRMQEASASLCWLRGWVTPDKVQTELSQITKAIEESELKRLGKDGQRRPNYRMYMRRTFLLPYAIVTS 242 (553)
Q Consensus 163 ~lpEsp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (553)
+++ +.++...
T Consensus 172 ~~~----------------------------------------------------------------------~~~~~~~ 181 (352)
T cd06174 172 FLL----------------------------------------------------------------------RLLLLLA 181 (352)
T ss_pred HHH----------------------------------------------------------------------HHHHHHH
Confidence 443 0112223
Q ss_pred HHHHHhhhhhHHHHhhHHHHHHhh-CCCCC-hHHHHHHHHHHHHHHHHHHhhhhcccCCcc-eeecchhHHHHHHHHHHH
Q psy15864 243 LFFIGQFGGMTTLQTYAVGIFESI-HAPLD-PYFATLLLGVAELGGALLCVVLIHYTGKRP-LALISTGGSAACFIVVAV 319 (553)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~-~~~~~~~~~i~~~~g~~~~g~l~dr~Grr~-~l~~~~~~~~i~~~~~~~ 319 (553)
+..+...........+.+.+..+. +.+.. ..+...+..++.+++.++.++++||+|||+ .+.++.++..++.+++..
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 261 (352)
T cd06174 182 LAFFLLSFGYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLLAL 261 (352)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHH
Confidence 333444444556666777777654 44432 346677788999999999999999999999 888888877777776665
Q ss_pred HHHhhcccCCCCChhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhHHHHhhccch
Q psy15864 320 YAQFHLSYGWDSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYYPMLDTFHLW 399 (553)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~~~g~~ 399 (553)
..+.+..++..++.+++.+... +....++.|.+|++.|++..|+.+....+++.+++.+.+.+.+..++.
T Consensus 262 ---------~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~~~~~ 331 (352)
T cd06174 262 ---------APSLALLLVALLLLGFGLGFAF-PALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLDTGGYG 331 (352)
T ss_pred ---------hccHHHHHHHHHHHHHHHhccc-hhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcc
Confidence 3345566666777777665554 444689999999999999999999999999999999999999888877
Q ss_pred hhHHHHHHHHHHHHhhhe
Q psy15864 400 GTLYFYAAISVVGTLYMY 417 (553)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~ 417 (553)
..+.+.+++.++..++.+
T Consensus 332 ~~~~~~~~~~~i~~i~~~ 349 (352)
T cd06174 332 GVFLILAALALLAALLLL 349 (352)
T ss_pred hHHHHHHHHHHHHHHHhe
Confidence 777777776666655543
No 41
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.73 E-value=1e-16 Score=167.44 Aligned_cols=271 Identities=13% Similarity=0.053 Sum_probs=163.4
Q ss_pred hhhhhhhhccCcccccchhchhhhhHHHHHHHHHhhccc-----cchHHHHHHHHHHHHHHHHHhccccCCceeeeecCC
Q psy15864 102 LVLTYVAEITQPHLRGMLSATASMTTIFGTVSQLFLGSF-----LHWRSAAILNLLFPILALCALYFIPESPHWLISQGR 176 (553)
Q Consensus 102 ~~~~~i~e~~p~~~Rg~~~~~~~~~~~lG~~l~~~l~~~-----lgWr~~f~i~~i~~li~~i~~~~lpEsp~~l~~~~~ 176 (553)
...+++.|++|+++|+++.++..+++.+|.++++.++.+ .|||++|++.+++.++.++..+++||+++.. .+
T Consensus 127 ~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg~~l~~~l~~~~~GWr~~f~i~a~l~ll~~l~~~~~~e~~~~~---~~ 203 (491)
T PRK11010 127 VFDAWKTDVLPAEERGAGAAISVLGYRLAMLVSGGLALWLADRYLGWQGMYWLMAALLIPCIIATLLAPEPTDTI---PV 203 (491)
T ss_pred HHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHhcCCCcccc---cc
Confidence 455889999999999999999999999999888755443 3899999999988887766666688875321 00
Q ss_pred hHHHHHHHHHHcCCCCCcchHHHHHHHHHHHHHHHHHhcCCCCCCChhhhhhhhhcchhHHHHHHHHHHHHhhhhhHHHH
Q psy15864 177 MQEASASLCWLRGWVTPDKVQTELSQITKAIEESELKRLGKDGQRRPNYRMYMRRTFLLPYAIVTSLFFIGQFGGMTTLQ 256 (553)
Q Consensus 177 ~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (553)
.+. ... .. ...+..+++++..+..++..++.. .+.....
T Consensus 204 ~~~----------------~~~---~~------------------~~~l~~~~~~~~~~~~ll~~~l~~----~~~~~~~ 242 (491)
T PRK11010 204 PKT----------------LEQ---AV------------------VAPLRDFFGRNNAWLILLLIVLYK----LGDAFAM 242 (491)
T ss_pred ccc----------------hhh---hH------------------HHHHHHHHcCcCHHHHHHHHHHHH----HHHHHHH
Confidence 000 000 00 011222232222222222222111 1122222
Q ss_pred hhHHHHH-HhhCCCCChH-HHH-HHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHHHHHHHHHhhcccCCCCCh
Q psy15864 257 TYAVGIF-ESIHAPLDPY-FAT-LLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAACFIVVAVYAQFHLSYGWDSPL 333 (553)
Q Consensus 257 ~~~~~~~-~~~g~~~~~~-~~~-~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 333 (553)
.+.+.++ +..|++.... +.. ....++.++|.+++|+++||+|+|+.+.++.++.+++.+++...... ..+.+
T Consensus 243 ~~~~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~~l~~~~l~~~-----~~~~~ 317 (491)
T PRK11010 243 SLTTTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFRALMIFGILQGVSNAGYWLLSIT-----DKNLY 317 (491)
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhc-----cccHH
Confidence 3334443 4466654433 333 34457889999999999999999887666555444444333221110 12222
Q ss_pred hHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhHHHHhhccchhhHHHHHHHHHHHH
Q psy15864 334 VPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYYPMLDTFHLWGTLYFYAAISVVGT 413 (553)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 413 (553)
.+.+..++..++.+.+.... +++..++.+.+.+++..|+.+....+++.+++.+.|.+.+..|+...+.+.+++.++..
T Consensus 318 ~l~~~~~l~~~~~g~~~~~~-~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~~G~~~~f~~~~~~~l~~l 396 (491)
T PRK11010 318 SMGAAVFFENLCGGMGTAAF-VALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEAHGWPTFYLFSVAAAVPGL 396 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHH-HHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHH
Confidence 23333334333333344333 47778899999999999999999999999999999999998886655555555554444
Q ss_pred hhheEEcccC
Q psy15864 414 LYMYFVMPET 423 (553)
Q Consensus 414 ~~~~~~~pet 423 (553)
++. .+++++
T Consensus 397 ~~~-~~~~~~ 405 (491)
T PRK11010 397 LLL-LVCRQT 405 (491)
T ss_pred HHH-HHHHhc
Confidence 433 334443
No 42
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.72 E-value=7.3e-17 Score=162.59 Aligned_cols=257 Identities=12% Similarity=0.009 Sum_probs=166.8
Q ss_pred ccccccccccc--chhhhhhhhhccCcccccchhchhhhhHHHHHHHHHhhcccc----chHHHHHHHHHHHHHHHHHhc
Q psy15864 89 KGTFLYKMAAP--LVLVLTYVAEITQPHLRGMLSATASMTTIFGTVSQLFLGSFL----HWRSAAILNLLFPILALCALY 162 (553)
Q Consensus 89 ~gr~~~G~ga~--~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~lG~~l~~~l~~~l----gWr~~f~i~~i~~li~~i~~~ 162 (553)
-.|+++|++.+ .+...+++.|++|+++|+++.++...+..+|.++++++++.+ +||+.|++.++..++..++.+
T Consensus 97 ~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~ 176 (365)
T TIGR00900 97 VLAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATLGIKWAIWVDAVGFAISALLIV 176 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHH
Confidence 35777777665 345678999999999999999999999999999999887765 999999998877766654443
Q ss_pred c--ccCCceeeeecCChHHHHHHHHHHcCCCCCcchHHHHHHHHHHHHHHHHHhcCCCCCCChhhhhhhhhcchhHHHHH
Q psy15864 163 F--IPESPHWLISQGRMQEASASLCWLRGWVTPDKVQTELSQITKAIEESELKRLGKDGQRRPNYRMYMRRTFLLPYAIV 240 (553)
Q Consensus 163 ~--lpEsp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (553)
+ .||.++.. +...+ .....+.. ..++.+++++..+...+.
T Consensus 177 ~~~~~~~~~~~--~~~~~------------------~~~~~~~~------------------~~~~~~~~~~~~~~~~~~ 218 (365)
T TIGR00900 177 SVRIPELAASE--IQALS------------------NAVLRDTR------------------EGIKFVLKNPLLRTLLLL 218 (365)
T ss_pred hcccccCCCcc--ccccc------------------hhHHHHHH------------------hHHHHHHcCcHHHHHHHH
Confidence 3 34432100 00000 00000000 112223333322222222
Q ss_pred HHHHHHHhhhhhHHHHhhHHHHHHh-hCCCCC-hHHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHHHHH
Q psy15864 241 TSLFFIGQFGGMTTLQTYAVGIFES-IHAPLD-PYFATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAACFIVVA 318 (553)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~-~~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~ 318 (553)
.++..+.. ......+.|.+... .+.+.. ......+.+++.+++.++.+++.||++||+.+..+.++.+++.+++.
T Consensus 219 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (365)
T TIGR00900 219 ALLFNLVF---APAIVALFPYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRYFKRMALMTGAIFVIGLAILVVG 295 (365)
T ss_pred HHHHHHHH---HHHHHHHhHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHH
Confidence 22211111 11222455666554 455433 34566677888999999999999999999887776665555555444
Q ss_pred HHHHhhcccCCC-CChhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhHHHHhhc
Q psy15864 319 VYAQFHLSYGWD-SPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYYPMLDTF 396 (553)
Q Consensus 319 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 396 (553)
+ .. +.+..++..++.+++.+... +...+++.|.+|++.|+++.|+.+.+..+++.+++.+.+.+.+..
T Consensus 296 ~---------~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~g~l~~~~ 364 (365)
T TIGR00900 296 L---------TPPNFPLFLVLWFAIGVGYGPIN-VPQGTLLQRRVPAELLGRVFGAQFSLSHAAWPLGLILAGPLADHL 364 (365)
T ss_pred h---------hchhHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 3 22 24555666667776665544 444588899999999999999999999999999999999888754
No 43
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.72 E-value=2e-16 Score=161.02 Aligned_cols=262 Identities=15% Similarity=0.112 Sum_probs=161.3
Q ss_pred cccccccccc--chhhhhhhhhccCcccccchhchhhhhHHHHHHHHHhhcccc----chHHHHHHHHHHHHHHHHHhc-
Q psy15864 90 GTFLYKMAAP--LVLVLTYVAEITQPHLRGMLSATASMTTIFGTVSQLFLGSFL----HWRSAAILNLLFPILALCALY- 162 (553)
Q Consensus 90 gr~~~G~ga~--~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~lG~~l~~~l~~~l----gWr~~f~i~~i~~li~~i~~~- 162 (553)
.|+++|++.+ .+...+++.|++|+++|+++.++...+.++|.+++++++..+ |||+.|++.++++++++++.+
T Consensus 114 ~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~l~~~~~l~~~~ 193 (394)
T PRK10213 114 GRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELIGWRNVFNAAAVMGVLCIFWIIK 193 (394)
T ss_pred HHHHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHH
Confidence 5778888765 467778999999999999999999999999988888887765 999999998887776654443
Q ss_pred cccCCceeeeecCChHHHHHHHHHHcCCCCCcchHHHHHHHHHHHHHHHHHhcCCCCCCChhhhhhhhhcchhHHHHHHH
Q psy15864 163 FIPESPHWLISQGRMQEASASLCWLRGWVTPDKVQTELSQITKAIEESELKRLGKDGQRRPNYRMYMRRTFLLPYAIVTS 242 (553)
Q Consensus 163 ~lpEsp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (553)
.+||+|+.. .+ .. ......++++..+..++.
T Consensus 194 ~~p~~~~~~---~~---~~-----------------------------------------~~~~~~l~~~~~~~~~~~-- 224 (394)
T PRK10213 194 SLPSLPGEP---SH---QK-----------------------------------------QNTFRLLQRPGVMAGMIA-- 224 (394)
T ss_pred HCCCCCccc---cc---ch-----------------------------------------hHHHHHhcCHHHHHHHHH--
Confidence 477764210 00 00 000111222212211111
Q ss_pred HHHHHhhhhhHHHHhh-HHHHHHhhCCCCCh-HHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHHHHHHH
Q psy15864 243 LFFIGQFGGMTTLQTY-AVGIFESIHAPLDP-YFATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAACFIVVAVY 320 (553)
Q Consensus 243 ~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~-~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~ 320 (553)
.+..+.+......+ .|.+.+..|++... .......+++.+++.++.+++.||.+++ .++.+.++..++.+++...
T Consensus 225 --~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r~~~~-~l~~~~~~~~~~~~~l~~~ 301 (394)
T PRK10213 225 --IFMSFAGQFAFFTYIRPVYMNLAGFGVDGLTLVLLSFGIASFVGTSLSSFILKRSVKL-ALAGAPLVLAVSALVLTLW 301 (394)
T ss_pred --HHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHhccchh-HHHHHHHHHHHHHHHHHHH
Confidence 12222222223334 36566666766543 4556677888999999999999995443 3333333323332222221
Q ss_pred HHhhcccCCCCChhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhHHHHhhccchh
Q psy15864 321 AQFHLSYGWDSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYYPMLDTFHLWG 400 (553)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~~~g~~~ 400 (553)
..+.+.+++..++.+++.+....... +++.+..|. .++...++...+..++..+++.+.|.+.+..+...
T Consensus 302 --------~~~~~~~~~~~~l~G~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~lg~~~G~~l~G~l~~~~g~~~ 371 (394)
T PRK10213 302 --------GSDKIVATGVAIIWGLTFALVPVGWS-TWITRSLAD-QAEKAGSIQVAVIQLANTCGAAIGGYALDNIGLTS 371 (394)
T ss_pred --------hhhHHHHHHHHHHHHHHHHhhhHHHH-HHHHHHCcc-cHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChhh
Confidence 23445555566666666544443333 567777774 45666677777888999999999999999887655
Q ss_pred hHHHHHHHHHHHH
Q psy15864 401 TLYFYAAISVVGT 413 (553)
Q Consensus 401 ~~~~~~~~~~~~~ 413 (553)
.+...+++.++..
T Consensus 372 ~~~~~~~~~~~~~ 384 (394)
T PRK10213 372 PLMLSGTLMLLTA 384 (394)
T ss_pred HHHHHHHHHHHHH
Confidence 5555444443433
No 44
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.72 E-value=1.2e-16 Score=162.88 Aligned_cols=259 Identities=14% Similarity=0.091 Sum_probs=151.6
Q ss_pred hhhhhhhhccCcccc--cchhchhhhhHHHHHHHHHhhcccc----chHHHHHHHHHHHHHHHHH-hccccCCceeeeec
Q psy15864 102 LVLTYVAEITQPHLR--GMLSATASMTTIFGTVSQLFLGSFL----HWRSAAILNLLFPILALCA-LYFIPESPHWLISQ 174 (553)
Q Consensus 102 ~~~~~i~e~~p~~~R--g~~~~~~~~~~~lG~~l~~~l~~~l----gWr~~f~i~~i~~li~~i~-~~~lpEsp~~l~~~ 174 (553)
...+++.++.+++.| +...++.+++.++|.++++++++.+ |||+.|++.++++++..++ ++++||.++-.
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~--- 201 (393)
T PRK15011 125 QMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYALAMGFSFTVMYLSAAVAFIVCGVMVWLFLPSMRKEL--- 201 (393)
T ss_pred HHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHhhcCccCCCC---
Confidence 444667777766555 3455777888888888888887655 9999999998887776544 44578765310
Q ss_pred CChHHHHHHHHHHcCCCCCcchHHHHHHHHHHHHHHHHHhcCCCCCCChhhhhhhhhcchhHHHHHHHHHHHHhhhhhHH
Q psy15864 175 GRMQEASASLCWLRGWVTPDKVQTELSQITKAIEESELKRLGKDGQRRPNYRMYMRRTFLLPYAIVTSLFFIGQFGGMTT 254 (553)
Q Consensus 175 ~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (553)
.. .. .. . ...+ ..++.....+... ...+.....
T Consensus 202 ~~-~~--------------~~----~----------------------~~~~--~~~~~~~~~~~~~----~~~~~~~~~ 234 (393)
T PRK15011 202 PL-AT--------------GT----L----------------------EAPR--RNRRDTLLLFVIC----TLMWGTNSL 234 (393)
T ss_pred cc-cc--------------cc----c----------------------cccc--cccccHHHHHHHH----HHHHHHHHH
Confidence 00 00 00 0 0000 0001011111111 111222333
Q ss_pred HHhhHHHHHH-hhCCCCCh-HHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHHHHHHHHHhhcccCCCCC
Q psy15864 255 LQTYAVGIFE-SIHAPLDP-YFATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAACFIVVAVYAQFHLSYGWDSP 332 (553)
Q Consensus 255 ~~~~~~~~~~-~~g~~~~~-~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 332 (553)
+..+.|.+++ ..+.+... .+...+..++.+++.+++|+++||+|||+.+..+.+..++..+.+.. ..+.
T Consensus 235 ~~~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~---------~~~~ 305 (393)
T PRK15011 235 YIINMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGMLM---------AHSP 305 (393)
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHH---------HhhH
Confidence 3445666654 34555332 34444555677888999999999999998766554444333322221 2233
Q ss_pred hhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhHHHHhhccchhhHHHHHHHHHHH
Q psy15864 333 LVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYYPMLDTFHLWGTLYFYAAISVVG 412 (553)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 412 (553)
+..++..++.+++.+...... .++..|.+|. .|+++.++.+....+++.+++.+.+.+.+..++...+.+.+++.++
T Consensus 306 ~~~l~~~~l~~~~~g~~~~~~-~~~~~~~~p~-~~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~g~~~~~~~~~~~~~~- 382 (393)
T PRK15011 306 AILLGLQLLNAIYIGILGGIG-MLYFQDLMPG-QAGSATTLYTNTSRVGWIIAGSLAGIVAEIWNYHAVFWFALVMIIA- 382 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-HHHHHHhCCC-CcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH-
Confidence 444444444444444433333 3667898886 4899999998889999999999999998887765555544444444
Q ss_pred HhhheEEccc
Q psy15864 413 TLYMYFVMPE 422 (553)
Q Consensus 413 ~~~~~~~~pe 422 (553)
.++.++++||
T Consensus 383 ~~~~~~~~~~ 392 (393)
T PRK15011 383 TLFCLLRIKD 392 (393)
T ss_pred HHHHHHhhcC
Confidence 4444445554
No 45
>PRK03699 putative transporter; Provisional
Probab=99.72 E-value=1e-16 Score=163.45 Aligned_cols=267 Identities=9% Similarity=0.042 Sum_probs=168.8
Q ss_pred ccccccccccc--chhhhhhhhhccCcccccchhchhhhhHHHHHHHHHhhccc-----cchHHHHHHHHHHHHHHHHHh
Q psy15864 89 KGTFLYKMAAP--LVLVLTYVAEITQPHLRGMLSATASMTTIFGTVSQLFLGSF-----LHWRSAAILNLLFPILALCAL 161 (553)
Q Consensus 89 ~gr~~~G~ga~--~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~lG~~l~~~l~~~-----lgWr~~f~i~~i~~li~~i~~ 161 (553)
-.|+++|++.+ .+...+++.|++|+++|+.++++...+..+|..+++.+... .+||++|++.+++.++.+++.
T Consensus 100 ~~~~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~gw~~~f~~~~~~~~~~~~~~ 179 (394)
T PRK03699 100 IAMFVLGVVSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYLLARSIEWYWVYACIGLVYVAIFILT 179 (394)
T ss_pred HHHHHHHHhhHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHH
Confidence 35777887654 44667889999999999999998888888887777766543 389999999888777665444
Q ss_pred ccccCCceeeeecCChHHHHHHHHHHcCCCCCcchHHHHHHHHHHHHHHHHHhcCCCCCCChhhhhhhhhcchhHHHHHH
Q psy15864 162 YFIPESPHWLISQGRMQEASASLCWLRGWVTPDKVQTELSQITKAIEESELKRLGKDGQRRPNYRMYMRRTFLLPYAIVT 241 (553)
Q Consensus 162 ~~lpEsp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (553)
++. +.|+.. .+.+ + +. . ... +..+.. .++..
T Consensus 180 ~~~-~~p~~~-~~~~-~-------------~~-----------------------~-----~~~----~~~~~~-~~~~~ 210 (394)
T PRK03699 180 LFS-EFPALG-KHAP-K-------------AD-----------------------K-----PVA----KEKWGI-GVLFL 210 (394)
T ss_pred Hhc-CCcccc-ccCc-c-------------cc-----------------------C-----ccc----cccCCh-HHHHH
Confidence 332 222100 0000 0 00 0 000 000111 12222
Q ss_pred HHHHHHhhhhhHHHHhhHHHHHHh-hCCCCC-hHHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHHHHHH
Q psy15864 242 SLFFIGQFGGMTTLQTYAVGIFES-IHAPLD-PYFATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAACFIVVAV 319 (553)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~-~~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~ 319 (553)
.+..+......+.+..|+|.++++ .+++.. .....+...++.++|.++.|+++||++||+.+.....+.+++.+++..
T Consensus 211 ~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~ 290 (394)
T PRK03699 211 AIAALLYILAQLTFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQRILTVLAGLALVLMYLFVN 290 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHH
Confidence 222333334445666788888854 566543 345666777889999999999999999998877666555444433322
Q ss_pred HHHhhcccCCCCChhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhHHHHhhccch
Q psy15864 320 YAQFHLSYGWDSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYYPMLDTFHLW 399 (553)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~~~g~~ 399 (553)
..+.+...+..++.+++.+..+.. ..++..+..|. .++...++...+..+++.++|.+.+++.+..++.
T Consensus 291 ---------~~~~~~~~~~~~~~G~~~~~~~~~-~~~~~~~~~~~-~~~~~~g~~~~~~~~g~~i~p~~~G~l~~~~g~~ 359 (394)
T PRK03699 291 ---------TDDPSHLLYAILGLGFFSSAIYTT-IITLGSQQTKV-ASPKLVNFILTCGTIGTMLTFVVTSPIVAHFGLQ 359 (394)
T ss_pred ---------cCCchHHHHHHHHHHHHHHHHHHH-HHHHHHHHccC-CCHHHHHHHHHhhhHHHHHHHHHHHHHHHHhCch
Confidence 334444445555666555444333 33566676654 4577788888889999999999999999988877
Q ss_pred hhHHHHHHHHHHHHhh
Q psy15864 400 GTLYFYAAISVVGTLY 415 (553)
Q Consensus 400 ~~~~~~~~~~~~~~~~ 415 (553)
..+++.+++++++.++
T Consensus 360 ~~~~~~~~~~~~~~~~ 375 (394)
T PRK03699 360 AALLTANGLYAVVFVM 375 (394)
T ss_pred hhhhhhHHHHHHHHHH
Confidence 7777666665555443
No 46
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.71 E-value=2.2e-16 Score=160.32 Aligned_cols=264 Identities=12% Similarity=0.075 Sum_probs=156.4
Q ss_pred cccccccccc--chhhhhhhhhccCcccccchhchhhhhHHHHHHHHHhhcccc----chHHHHHHHHHHHHHHHHH-hc
Q psy15864 90 GTFLYKMAAP--LVLVLTYVAEITQPHLRGMLSATASMTTIFGTVSQLFLGSFL----HWRSAAILNLLFPILALCA-LY 162 (553)
Q Consensus 90 gr~~~G~ga~--~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~lG~~l~~~l~~~l----gWr~~f~i~~i~~li~~i~-~~ 162 (553)
.|+++|++.+ .+...+++.+++|+++|+++++++..+..+|..+++.+++.+ +||++|++.+++++++++. ++
T Consensus 97 ~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~ 176 (382)
T PRK10091 97 GRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEFSWRYTFLLIAVFNIAVLASIYF 176 (382)
T ss_pred HHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhhhccHHHHHHHHHHHHHHHHHHHHH
Confidence 5788888755 345667889999999999999999999999988888776554 8999999998887766543 34
Q ss_pred cccCCceeeeecCChHHHHHHHHHHcCCCCCcchHHHHHHHHHHHHHHHHHhcCCCCCCChhhhhhhhhcchhHHHHHHH
Q psy15864 163 FIPESPHWLISQGRMQEASASLCWLRGWVTPDKVQTELSQITKAIEESELKRLGKDGQRRPNYRMYMRRTFLLPYAIVTS 242 (553)
Q Consensus 163 ~lpEsp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (553)
++||.++- .+. ... ..++.+.++. .+ ...
T Consensus 177 ~lp~~~~~----~~~-----------------~~~-------------------------~~~~~~~~~~-~~---~~~- 205 (382)
T PRK10091 177 WVPDIRDE----AKG-----------------GLR-------------------------EQFHFLRSPA-PW---LIF- 205 (382)
T ss_pred hCCCCCcc----ccc-----------------CHH-------------------------HHHHHhcChH-HH---HHH-
Confidence 57875420 000 000 0001111111 11 111
Q ss_pred HHHHHhhhhhHHHHhhHHHHHH-hhCCCCC-hHHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHHHHHHH
Q psy15864 243 LFFIGQFGGMTTLQTYAVGIFE-SIHAPLD-PYFATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAACFIVVAVY 320 (553)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~-~~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~ 320 (553)
+..+....+......|.+.++. ..|.+.. ..+...+.+++.+++.++.+++.||+|+|+.+.++.++.+++.+++...
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~~~~~~~~~~~~~~~i~~~~~~~~ 285 (382)
T PRK10091 206 AATMFGNAGVFAWFSYIKPYMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRYSPLRIAAVTDFIIVLALLMLFFF 285 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHheeccccCchhHHHHHHHHHHHHHHHHHHH
Confidence 1111111222222234444443 4565543 3466677888999999999999999999998887777766666544332
Q ss_pred HHhhcccCCCCChhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhHHHHhhc-cch
Q psy15864 321 AQFHLSYGWDSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYYPMLDTF-HLW 399 (553)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~~~-g~~ 399 (553)
.++.+..++..++.+++......+.......+..|.+.++.+ ..+....+++.++|.+.+.+.+.. ++.
T Consensus 286 --------~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~Gp~~~G~l~~~~~~~~ 355 (382)
T PRK10091 286 --------GGMKTASLIFAFICCAGLFALSAPLQILLLQNAKGGELLGAA--GGQIAFNLGSAIGAYCGGMMLTLGLAYN 355 (382)
T ss_pred --------HhhHHHHHHHHHHHHHHHHhhhHHHHHHHHHhCCcchHHHHH--HHHHHHHHHHHHHHHHhHHHHHcccCcc
Confidence 122233333333343333222222222333444555555544 346678899999999999998864 444
Q ss_pred hhHHHHHHHHHHHHh
Q psy15864 400 GTLYFYAAISVVGTL 414 (553)
Q Consensus 400 ~~~~~~~~~~~~~~~ 414 (553)
..+.+.++++++...
T Consensus 356 ~~~~~~~~~~~~~~~ 370 (382)
T PRK10091 356 YVALPAALLSFAAMS 370 (382)
T ss_pred hHHHHHHHHHHHHHH
Confidence 455544444444333
No 47
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.71 E-value=4.9e-16 Score=158.87 Aligned_cols=278 Identities=12% Similarity=0.023 Sum_probs=164.3
Q ss_pred cccccccccccc--hhhhhhhhhccCcccccchhchhhhhHHHHH-HHHHhhcccc----chHHHHHHHHHHHHHHHHH-
Q psy15864 89 KGTFLYKMAAPL--VLVLTYVAEITQPHLRGMLSATASMTTIFGT-VSQLFLGSFL----HWRSAAILNLLFPILALCA- 160 (553)
Q Consensus 89 ~gr~~~G~ga~~--~~~~~~i~e~~p~~~Rg~~~~~~~~~~~lG~-~l~~~l~~~l----gWr~~f~i~~i~~li~~i~- 160 (553)
-.|+++|+|.+. +...+++.+++|+++|++++++..++..+|. ++++++++.+ ||+..++......++..++
T Consensus 110 ~~~~i~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~ 189 (402)
T TIGR00897 110 LFYGIRGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPAFGEMNTLWSALAFVLTGGVIA 189 (402)
T ss_pred HHHHHHHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHH
Confidence 357888887653 2445678899999999999999999999986 5677766543 7665555443333333222
Q ss_pred hccccCCceeeeecCChHHHHHHHHHHcCCCCCcchHHHHHHHHHHHHHHHHHhcCCCCCCChhhhhhhhhcchhHHHHH
Q psy15864 161 LYFIPESPHWLISQGRMQEASASLCWLRGWVTPDKVQTELSQITKAIEESELKRLGKDGQRRPNYRMYMRRTFLLPYAIV 240 (553)
Q Consensus 161 ~~~lpEsp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (553)
.+++++.+.-. .+++.. . ..+.. ..++.+++.+.. +.
T Consensus 190 ~~~~~~~~~~~-~~~~~~----------------~----~~~~~------------------~~~~~~~~~~~~----~~ 226 (402)
T TIGR00897 190 LFSNKDIFTPQ-HMQTRE----------------K----FSELG------------------KAATILFTNPNV----LL 226 (402)
T ss_pred HhccCCCCCcc-cccCCc----------------c----hhhHH------------------HHHHHHHcChhH----HH
Confidence 22344321100 000000 0 00000 011122222222 22
Q ss_pred HHHHHHHhhhhhHHHHhhHHHHHHhhCCCCCh-HHHHHHHHHHHHHHHHHHhhhhcccCCcceee-cchhHHHHHHHHHH
Q psy15864 241 TSLFFIGQFGGMTTLQTYAVGIFESIHAPLDP-YFATLLLGVAELGGALLCVVLIHYTGKRPLAL-ISTGGSAACFIVVA 318 (553)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~-~~~~~~~i~~~~~~ 318 (553)
..+..++.....+.+..|.|.+.+..|.+... .....+..++.+++.++.|+++||+|||+.+. .+.+..+++.+.+.
T Consensus 227 ~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~l~~~~~~~~l~ 306 (402)
T TIGR00897 227 GGMVRIINTIGLFGFAVFLPMFVAELGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMNTVRWFGGVGCGIFTLALY 306 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHH
Confidence 22223333444556677888888777766443 34555677889999999999999999887653 22223333322222
Q ss_pred HHHHhhcccCCCCChhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhHHHHhhccc
Q psy15864 319 VYAQFHLSYGWDSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYYPMLDTFHL 398 (553)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~~~g~ 398 (553)
..... ...+.+..++..++.+++.+.. .+.. ..+.+..| +.||++.|+.+....+++.++|.+.+.+.+..++
T Consensus 307 ~~~~~----~~~~~~~~~~~~~~~G~~~~~~-~~~~-~~~~~~~~-~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~g~ 379 (402)
T TIGR00897 307 YIPQH----FGHSFAVALIIAIALGIFLAGY-VPLA-AVFPTLAP-KHKGAAMSVLNLSAGLSAFLAPAIAVLFIGFFGA 379 (402)
T ss_pred HHHHc----cCCcHHHHHHHHHHHHHHHHHH-HHHH-HHHHhhCc-chhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcch
Confidence 21110 0123344445555556555432 3333 45567655 5899999999999999999999999999998887
Q ss_pred hhhHHHHHHHHHHHHhhh
Q psy15864 399 WGTLYFYAAISVVGTLYM 416 (553)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~ 416 (553)
...+++.+++.++..++.
T Consensus 380 ~~~~~~~a~~~~i~~~~~ 397 (402)
T TIGR00897 380 IGVVWIFAALYVVSAFLT 397 (402)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 777777776666655544
No 48
>KOG2532|consensus
Probab=99.71 E-value=4.3e-17 Score=166.15 Aligned_cols=291 Identities=18% Similarity=0.180 Sum_probs=186.1
Q ss_pred cccccccccc--chhhhhhhhhccCcccccchhchhhhhHHHHHHHHHhhcccc-----chHHHHHHHHHHHHHHHHHhc
Q psy15864 90 GTFLYKMAAP--LVLVLTYVAEITQPHLRGMLSATASMTTIFGTVSQLFLGSFL-----HWRSAAILNLLFPILALCALY 162 (553)
Q Consensus 90 gr~~~G~ga~--~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~lG~~l~~~l~~~l-----gWr~~f~i~~i~~li~~i~~~ 162 (553)
-|+++|++.+ ++....+.+.|+|+++|++..++...+..+|.+++..+++.+ ||+++|++.++++++..++++
T Consensus 134 ~R~lqGl~~g~~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~ 213 (466)
T KOG2532|consen 134 LRFLQGLGQGVLFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWF 213 (466)
T ss_pred HHHHhHHHHhHHHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHH
Confidence 4888887654 667778999999999999999999999999988877665544 999999999999999977765
Q ss_pred c-ccCCceeeeecCChHHHHHHHHHHcCCCCCcchHHHHHHHHHHHHHHHHHhcCCCCCCChhhhhhhhhcchhHHHHHH
Q psy15864 163 F-IPESPHWLISQGRMQEASASLCWLRGWVTPDKVQTELSQITKAIEESELKRLGKDGQRRPNYRMYMRRTFLLPYAIVT 241 (553)
Q Consensus 163 ~-lpEsp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (553)
+ ..|+|.-. .. -...|.+.+.+...... .. .....+++.+++. +.++++
T Consensus 214 ~~~~d~P~~h---~~------------------is~~El~~I~~~k~~~~----~~-~~~~vP~~~i~ts----~~vwai 263 (466)
T KOG2532|consen 214 LFYSDSPSKH---PN------------------ISEKELKYIEKGKSEAH----VK-KKPPVPYKAILTS----PPVWAI 263 (466)
T ss_pred HHhcCCcccC---CC------------------CCHHHHHHHHhcccccc----cC-CCCCCCHHHHHcC----HHHHHH
Confidence 5 66777421 11 11112222222111100 00 0023445555444 345666
Q ss_pred HHHHHHhhhhhHHHHhhHHHHHHh-hCCCC-ChHHHHHHHHHHHHHHHHHHhhhhcccCCc---------ceeecchhHH
Q psy15864 242 SLFFIGQFGGMTTLQTYAVGIFES-IHAPL-DPYFATLLLGVAELGGALLCVVLIHYTGKR---------PLALISTGGS 310 (553)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~-~~~~~~~~~~i~~~~g~~~~g~l~dr~Grr---------~~l~~~~~~~ 310 (553)
.+..++...+.+.+..|+|.|+++ .+++. +..+..++..+..++..+++|.++|++-+| ..-.++..+.
T Consensus 264 ~~~~f~~~~~~~~l~~y~PtY~~~VL~f~v~~~G~~salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~i~~~~~ 343 (466)
T KOG2532|consen 264 WISAFGGNWGFYLLLTYLPTYLKEVLGFDVRETGFLSALPFLAMAIVKFVAGQLSDRLTFRILSETTVRKIFNTIAFGGP 343 (466)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHhCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCchHhHHHHHHhHHHHHH
Confidence 666777788888999999999975 56654 345777788899999999999999998764 1122333333
Q ss_pred HHHHHHHHHHHHhhcccCCCCChhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhH
Q psy15864 311 AACFIVVAVYAQFHLSYGWDSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYY 390 (553)
Q Consensus 311 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~ 390 (553)
+++++++++.. ....+..+++..+...+.|...... +.-..+..| +.-+..+|+.+.+..+.++++|.+.+
T Consensus 344 ai~l~~l~~~~-------~~~~~~a~~~l~~~~~~~g~~~~Gf-~~~~~~~ap-q~a~~l~g~~~~~~~~~~~~~P~~vg 414 (466)
T KOG2532|consen 344 AVFLLVLAFTS-------DEHRLLAVILLTIAIGLSGFNISGF-YKNHQDIAP-QHAGFVMGIINFVGALAGFIAPLLVG 414 (466)
T ss_pred HHHHHeeeecC-------CCcchHHHHHHHHHHHHcccchhhh-Hhhhhhccc-hHHHHHHHHHHHHHHHHHHHHHHhee
Confidence 34443333321 1122233333222222222222222 122233344 55599999999999999999999999
Q ss_pred HHHhh---ccchhhHHHHHHHHHHHHhhheEE
Q psy15864 391 PMLDT---FHLWGTLYFYAAISVVGTLYMYFV 419 (553)
Q Consensus 391 ~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~ 419 (553)
.+... ..|...|++.+++.++..++..++
T Consensus 415 ~~~~~~t~~eW~~VF~i~a~i~~~~~i~f~~f 446 (466)
T KOG2532|consen 415 IIVTDNTREEWRIVFLIAAGILIVGNIIFLFF 446 (466)
T ss_pred eEeCCCCHHHHHHHHHHHHHHHHHhchheeEe
Confidence 98842 356667777777777766555444
No 49
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.71 E-value=1e-16 Score=167.07 Aligned_cols=280 Identities=13% Similarity=0.076 Sum_probs=147.3
Q ss_pred cccccccccccc-hhhhhhhhhccCcccccchhchhhhhHHHHHHHH----Hhhcc---------ccchHHHHHHHHHHH
Q psy15864 89 KGTFLYKMAAPL-VLVLTYVAEITQPHLRGMLSATASMTTIFGTVSQ----LFLGS---------FLHWRSAAILNLLFP 154 (553)
Q Consensus 89 ~gr~~~G~ga~~-~~~~~~i~e~~p~~~Rg~~~~~~~~~~~lG~~l~----~~l~~---------~lgWr~~f~i~~i~~ 154 (553)
-.|+++|++... ..+..+++|++|+++||+++++...+..+|..++ +.+.. ..|||+.|++.++++
T Consensus 129 ~~r~l~G~~~~~~~~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gWr~~f~i~g~l~ 208 (476)
T PLN00028 129 AVRFFIGFSLATFVSCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAWRIAFFVPGLLH 208 (476)
T ss_pred HHHHHHHHHHHhhHHHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHH
Confidence 357888876542 3345678999999999999999876555555544 33321 138999999999988
Q ss_pred HHHHHHhcccc-CCceeeeecCChHHHHHHHHHHcCCCCCcchHHHHHHHHHHHHHHHHHhcCCCCCCChhhhhhhhhcc
Q psy15864 155 ILALCALYFIP-ESPHWLISQGRMQEASASLCWLRGWVTPDKVQTELSQITKAIEESELKRLGKDGQRRPNYRMYMRRTF 233 (553)
Q Consensus 155 li~~i~~~~lp-Esp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (553)
+++.++.++++ +.|. +...+..+ ..... .......+...++.+
T Consensus 209 l~~~l~~~~~~~~~p~-----~~~~~~~~-------~~~~~-----------------------~~~~~~~~~~~~~~~- 252 (476)
T PLN00028 209 IIMGILVLTLGQDLPD-----GNYRELKK-------SGTMP-----------------------KDSFSKVLRYGVTNY- 252 (476)
T ss_pred HHHHHHHHHHcCcCCC-----CchhhHHh-------cCccc-----------------------cccHHHHHHHHHcCc-
Confidence 87765555544 3332 01000000 00000 000000111111111
Q ss_pred hhHHHHHHHHHHHHhhhhhHHHHhhHHHHHHh-hCCCCC-hHHHHHHHHHHHHHHHHHHhhhhcccCCccee----ecch
Q psy15864 234 LLPYAIVTSLFFIGQFGGMTTLQTYAVGIFES-IHAPLD-PYFATLLLGVAELGGALLCVVLIHYTGKRPLA----LIST 307 (553)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~-~~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l----~~~~ 307 (553)
+. +...+.++........+..+.|.++.. .|++.. ......+.+++.+++.+++|+++||++||... .+..
T Consensus 253 --~~-~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~~r~~~~~ 329 (476)
T PLN00028 253 --RT-WILALTYGYSFGVELTMDNIIAEYFYDRFGLSLETAGAIAASFGLMNLFARPAGGYLSDVAARRFGMRGRLWALW 329 (476)
T ss_pred --hh-HHHHHHHHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCcchhHHHHH
Confidence 11 122222222222233445566666543 466543 34566678899999999999999999976321 1111
Q ss_pred hHHHHHHHHHHHHHHhhcccCCCCChhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHHHHHH
Q psy15864 308 GGSAACFIVVAVYAQFHLSYGWDSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNK 387 (553)
Q Consensus 308 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~ 387 (553)
+..+++.+.+..+.. ..+.+..++..++++++.+.+... .+.++.++.| +.||++.|+.+..+.+++++++.
T Consensus 330 ~~~~l~~i~~~~~~~------~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~-~~~g~~~g~~~~~g~lg~~i~~~ 401 (476)
T PLN00028 330 IVQTLGGVFCIWLGR------ANSLGAAIVVMILFSIFVQAACGA-TFGIVPFVSR-RSLGVISGLTGAGGNVGAVLTQL 401 (476)
T ss_pred HHHHHHHHHHHHhcc------cchHHHHHHHHHHHHHHHHHhhhh-hcccCcccCh-hhchhhhhhhhccccHHHHHHHH
Confidence 111111111111110 222333333444444444333333 3466667654 68899999998888888888876
Q ss_pred HhHHHHhhccchhhHHHHHHHHHHHHhhh
Q psy15864 388 LYYPMLDTFHLWGTLYFYAAISVVGTLYM 416 (553)
Q Consensus 388 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 416 (553)
+.+ ..+..++...+++.+++.+++.++.
T Consensus 402 l~~-~~~~~~y~~~f~~~~~~~~i~~~~~ 429 (476)
T PLN00028 402 LFF-TGSSYSTETGISLMGVMIIACTLPV 429 (476)
T ss_pred HHH-hcCCccHhhHHHHHHHHHHHHHHHH
Confidence 654 1122234455555555544444433
No 50
>KOG2533|consensus
Probab=99.70 E-value=3.2e-17 Score=167.34 Aligned_cols=274 Identities=12% Similarity=0.075 Sum_probs=160.1
Q ss_pred ccccccc--ccchhhhhhhhhccCcccccchhchhhhhHHHHHHHHHhhccc-------c---chHHHHHHHHHHHHHHH
Q psy15864 91 TFLYKMA--APLVLVLTYVAEITQPHLRGMLSATASMTTIFGTVSQLFLGSF-------L---HWRSAAILNLLFPILAL 158 (553)
Q Consensus 91 r~~~G~g--a~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~lG~~l~~~l~~~-------l---gWr~~f~i~~i~~li~~ 158 (553)
|++.|+. +..|....+++.|+.+++||..++++.++.++|.++|+++++. . ||||+|++.++++++..
T Consensus 141 r~llGl~es~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~g 220 (495)
T KOG2533|consen 141 RFLLGLFESGGWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLG 220 (495)
T ss_pred HHHHHHHhcccchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHH
Confidence 7777763 4566777999999999999999999999999999998888776 2 99999999999998886
Q ss_pred HHh-ccccCCce--eeeecCChHHHHHHHHHHcCCCCCcchHHHHHHHHHHHHHHHHHhcCCCCCCChhhhhhhhhcchh
Q psy15864 159 CAL-YFIPESPH--WLISQGRMQEASASLCWLRGWVTPDKVQTELSQITKAIEESELKRLGKDGQRRPNYRMYMRRTFLL 235 (553)
Q Consensus 159 i~~-~~lpEsp~--~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (553)
++. +++|+.|. +...+...+-+ ..+++..+. ........+. -+...+..
T Consensus 221 i~~f~~lp~~P~~~~fl~~~ek~~~---~~~~~~~~~------------------------~~~~~~~~~~-~~~~a~~d 272 (495)
T KOG2533|consen 221 IVVFFFLPDNPSKAWFLTDEEKELV---VERLRESPS------------------------GGIENKFKWK-GFKEALKD 272 (495)
T ss_pred heEEEEecCChhhccccchHHHHHH---HHHHHhccC------------------------CCcccccCHH-HHHHHHhc
Confidence 554 55999886 22211111101 111110000 0000001111 12222333
Q ss_pred HHHHHHHHHHHHhhhhhHHHHhhHHHHHHh-hCCCC-ChHHHHHHHHHHHHHHHHHHhhhhcc----cCCcceeecchhH
Q psy15864 236 PYAIVTSLFFIGQFGGMTTLQTYAVGIFES-IHAPL-DPYFATLLLGVAELGGALLCVVLIHY----TGKRPLALISTGG 309 (553)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~-~~~~~~~~~~i~~~~g~~~~g~l~dr----~Grr~~l~~~~~~ 309 (553)
+.++..++..++.....+.+.+|+|.++.. .+++. +.....+...++++++.+++|+++|| ..+|......+.+
T Consensus 273 p~vw~~~l~~~~~~lv~~~~~~~lpl~l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~~~~~~~~~~~~~~~~ 352 (495)
T KOG2533|consen 273 PGVWPFSLCYFFLKLVNYGFSYWLPLYLKSNGGYSELQANLLSTPYDVGGIVGLILAGYLSDRLKTIFARRLLFIVFLCL 352 (495)
T ss_pred hhHHHHHHHHHHHhhccccHHHHHHHHHHcCCCcChHHhccccchHHhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 445666666777777788889999999987 33543 34467778889999999999999999 4555544444333
Q ss_pred HHHHH-HHHHHHHHhhcccCCCCChhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhh-hHHHHHHHHHHHHHHH
Q psy15864 310 SAACF-IVVAVYAQFHLSYGWDSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATAS-GASGSSSYIFAFAVNK 387 (553)
Q Consensus 310 ~~i~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~-~~~~~~~~~~~~i~~~ 387 (553)
+.+.. +.+.. .........+.+....+. ....++....+++....+.|.... ++.......+++++|.
T Consensus 353 ~~~~g~~~l~~---------~~~~~~~~~~~~~~~~~~-~~~~~~~~~w~s~~~~g~~k~~~~~~~~i~~~~s~~~~~~~ 422 (495)
T KOG2533|consen 353 YAIIGAISLLA---------AAVLPGAYGAFLIGPYGL-IATAIIALSWTSANLAGNTKALTTVSAIIDGTGSAGAISGQ 422 (495)
T ss_pred HHHHHHHHHHh---------hccchHHhHHHHhcchhh-HHHHHHHHhhccccccchHHhHHHHhhhhcchhHHHHhhhh
Confidence 33332 33322 222222222222222222 222333346666666555544443 4444445566666665
Q ss_pred HhHHHHhh-ccchhhH
Q psy15864 388 LYYPMLDT-FHLWGTL 402 (553)
Q Consensus 388 ~~~~~~~~-~g~~~~~ 402 (553)
+....... +.+...+
T Consensus 423 ~~~~~~ap~y~~~~~f 438 (495)
T KOG2533|consen 423 LFRSLDAPRYGWGAVF 438 (495)
T ss_pred hcccccCcchhhhhHH
Confidence 55443332 3444444
No 51
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.70 E-value=4.7e-16 Score=157.53 Aligned_cols=266 Identities=14% Similarity=0.070 Sum_probs=158.0
Q ss_pred cccccccc--cchhhhhhhhhccCcccccch--hchhhhhHHHHHHHHHhhcccc----chHHHHHHHHHHHHHHHHHh-
Q psy15864 91 TFLYKMAA--PLVLVLTYVAEITQPHLRGML--SATASMTTIFGTVSQLFLGSFL----HWRSAAILNLLFPILALCAL- 161 (553)
Q Consensus 91 r~~~G~ga--~~~~~~~~i~e~~p~~~Rg~~--~~~~~~~~~lG~~l~~~l~~~l----gWr~~f~i~~i~~li~~i~~- 161 (553)
|+++|.+. ..+...+++.|+.|+++|++. .+....+..+|.++++.+++.+ +||++|++.+++.++..++.
T Consensus 94 ~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~ 173 (375)
T TIGR00899 94 GVLLSSFASTANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLALGFGFTVMFLTAALAFVLCGVLVW 173 (375)
T ss_pred HHHHHhhhhhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHH
Confidence 55555433 234455677888887777644 5677777777777777776544 89999999988877765544
Q ss_pred ccccCCceeeeecCChHHHHHHHHHHcCCCCCcchHHHHHHHHHHHHHHHHHhcCCCCCCChhhhhhhhhcchhHHHHHH
Q psy15864 162 YFIPESPHWLISQGRMQEASASLCWLRGWVTPDKVQTELSQITKAIEESELKRLGKDGQRRPNYRMYMRRTFLLPYAIVT 241 (553)
Q Consensus 162 ~~lpEsp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (553)
+++||+|+....+.. . .......+++..+......
T Consensus 174 ~~~~~~~~~~~~~~~----------------~-----------------------------~~~~~~~~~~~~~~~~~~~ 208 (375)
T TIGR00899 174 LFLPSYPRGAPGALT----------------R-----------------------------LEVRGLLASRDTRLLFVAC 208 (375)
T ss_pred HhCCCcccCcccccC----------------c-----------------------------chhhhhhcCcchHHHHHHH
Confidence 448887653110000 0 0000011111122112222
Q ss_pred HHHHHHhhhhhHHHHhhHHHHH-HhhCCCCCh-HHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHHHHHH
Q psy15864 242 SLFFIGQFGGMTTLQTYAVGIF-ESIHAPLDP-YFATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAACFIVVAV 319 (553)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~-~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~ 319 (553)
++.+. .......+.|.++ +..+.+... .+......+..+++.+++|+++||+|||+.+.++.++..++.+.+..
T Consensus 209 ~~~~~----~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~ 284 (375)
T TIGR00899 209 TLMWG----CNILYIINMPLLIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAALAGVAFYTGLAA 284 (375)
T ss_pred HHHHH----HHHHHHhhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchhHHHHHHHHHHHHHHHHHH
Confidence 11111 1222233445544 344554332 23344445566778889999999999999877665544443333222
Q ss_pred HHHhhcccCCCCChhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhHHHHhhccch
Q psy15864 320 YAQFHLSYGWDSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYYPMLDTFHLW 399 (553)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~~~g~~ 399 (553)
.++.+..++...+.+++.+... +....++.|..|.+ ++++.++.+.+.++++.++|.+.+.+.+..++.
T Consensus 285 ---------~~~~~~~~~~~~~~g~~~g~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~g~~ 353 (375)
T TIGR00899 285 ---------DNSLWALLMLQLLNAIFIGILA-GIGMLYFQDLMPGR-AGAATTLYTNTGRVGWIIAGSVGGILAERWSYH 353 (375)
T ss_pred ---------HHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCcch-hhHHHHHHHHHHHHHHHHHHHHHHHHHHhccch
Confidence 2234444555555566555443 34447788988865 579999999999999999999999998888876
Q ss_pred hhHHHHHHHHHHHHhhh
Q psy15864 400 GTLYFYAAISVVGTLYM 416 (553)
Q Consensus 400 ~~~~~~~~~~~~~~~~~ 416 (553)
..+.+.+++.++..++.
T Consensus 354 ~~~~~~~~~~~~~~~~~ 370 (375)
T TIGR00899 354 AVYWFAIVMLIVALFCL 370 (375)
T ss_pred hHHHHHHHHHHHHHHHH
Confidence 66666665555554443
No 52
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.69 E-value=4.7e-16 Score=179.83 Aligned_cols=263 Identities=10% Similarity=-0.028 Sum_probs=169.8
Q ss_pred cccccccccc--chhhhhhhhhccCcccccchhchhhhhHHHHHHHHHhhcccc----chHHHHHHHHHHHHHHHHHhcc
Q psy15864 90 GTFLYKMAAP--LVLVLTYVAEITQPHLRGMLSATASMTTIFGTVSQLFLGSFL----HWRSAAILNLLFPILALCALYF 163 (553)
Q Consensus 90 gr~~~G~ga~--~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~lG~~l~~~l~~~l----gWr~~f~i~~i~~li~~i~~~~ 163 (553)
.|+++|++.+ .++..+++.+++|+++|++++++.+++..+|.++|+++++++ +|++.|++.+++++++++++++
T Consensus 114 ~~~l~gi~~a~~~p~~~a~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (1140)
T PRK06814 114 ALFLMGIHSALFGPIKYSILPDHLNKDELLGANALVEAGTFIAILLGTIIGGLATISGNFVILVALLMGIAVLGWLASLF 193 (1140)
T ss_pred HHHHHHHHHHhhchHHHHhhHhhcCccccchhhHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHhh
Confidence 5888888754 467889999999999999999999999999999999998876 8999996666666666666677
Q ss_pred ccCCceeeeecCChHHHHHHHHHHcCCCCCcchHHHHHHHHHHHHHHHHHhcCCCCCCChhhhhhhhhcchhHHHHHHHH
Q psy15864 164 IPESPHWLISQGRMQEASASLCWLRGWVTPDKVQTELSQITKAIEESELKRLGKDGQRRPNYRMYMRRTFLLPYAIVTSL 243 (553)
Q Consensus 164 lpEsp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (553)
+|+++.-- .+.... ... ..+.. ..++...+.+..+..++..+
T Consensus 194 ~~~~~~~~--~~~~~~--------------~~~---~~~~~------------------~~~~~~~~~~~~~~~~~~~~- 235 (1140)
T PRK06814 194 IPKTGNAA--PDLKID--------------RNI---IRSTI------------------TLLKYAKADKRIWLAILGIS- 235 (1140)
T ss_pred CCCCCCCC--CCCeec--------------cch---HHHHH------------------HHHHHHhcCchHHHHHHHHH-
Confidence 77654210 000000 000 00000 11222333333322222222
Q ss_pred HHHHhhhhhHHHHhhHHHHHHh-hCCCCC-hHHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHHHHHHHH
Q psy15864 244 FFIGQFGGMTTLQTYAVGIFES-IHAPLD-PYFATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAACFIVVAVYA 321 (553)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~-~g~~~~-~~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~ 321 (553)
..+.....+..++|.++.. .+.+.. ..+..+..+++.++|.+++|+++++.+++..+.++.++.+++.+.+.+..
T Consensus 236 ---~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 312 (1140)
T PRK06814 236 ---WFWLVGAVVLSQLPLLAKETLGGDENVATLFLAVFSVGVAVGSFLASKLSEGRITLLYVPIGALLMGLFGLDLAFAS 312 (1140)
T ss_pred ---HHHHHHHHHHHHhHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCceeeeeehHHHHHHHHHHHHHHhcc
Confidence 2222233344456666654 455433 34667788899999999999999988877766666555554444333210
Q ss_pred Hh-----------hcccCCCCChhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhH
Q psy15864 322 QF-----------HLSYGWDSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYY 390 (553)
Q Consensus 322 ~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~ 390 (553)
.. .......+.+.+++..++++++.++...++ .+++.+.+|++.||+++|+.+.+..++..+++.+++
T Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~g 391 (1140)
T PRK06814 313 SSVPAEPAQLKSILVFLSKRHGWRILIDLFGLAAAGGLYIVPL-FAALQAWANPAHRARVIAANNVLNAAFMVAGTIILA 391 (1140)
T ss_pred cccccccccccchhhhhcccccHHHHHHHHHHHHHHHHhHHHH-HHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHHHH
Confidence 00 000001455666666677777666555555 488899999999999999999999999999999888
Q ss_pred HHHh
Q psy15864 391 PMLD 394 (553)
Q Consensus 391 ~~~~ 394 (553)
.+..
T Consensus 392 ~l~~ 395 (1140)
T PRK06814 392 LLQA 395 (1140)
T ss_pred HHHH
Confidence 8764
No 53
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.69 E-value=4.5e-16 Score=163.29 Aligned_cols=293 Identities=11% Similarity=0.041 Sum_probs=173.3
Q ss_pred cccccccccccch--hhhhhhhhcc-CcccccchhchhhhhHHHHHHHHHhhcccc----chHHHHHHHHHHHHHHHHHh
Q psy15864 89 KGTFLYKMAAPLV--LVLTYVAEIT-QPHLRGMLSATASMTTIFGTVSQLFLGSFL----HWRSAAILNLLFPILALCAL 161 (553)
Q Consensus 89 ~gr~~~G~ga~~~--~~~~~i~e~~-p~~~Rg~~~~~~~~~~~lG~~l~~~l~~~l----gWr~~f~i~~i~~li~~i~~ 161 (553)
-+|+++|+|++.. ...+.+.+.+ |+++|+++++++.+...+|.++||++++.+ +|||+|++.++++++.+++.
T Consensus 99 ~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~gwr~~f~i~~~~~~~~~~l~ 178 (495)
T PRK14995 99 ATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEHFYWGSVFLINVPIVLVVMGLT 178 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHH
Confidence 4788999987643 3445565655 779999999999999999999999888776 99999999988877765443
Q ss_pred -ccccCCceeeeecCChHHHHHHH---------HHHcCCCCCc-chHHHHHHHHHHHH--HHHHHhcCCCCCCChhhhhh
Q psy15864 162 -YFIPESPHWLISQGRMQEASASL---------CWLRGWVTPD-KVQTELSQITKAIE--ESELKRLGKDGQRRPNYRMY 228 (553)
Q Consensus 162 -~~lpEsp~~l~~~~~~~~a~~~l---------~~~~~~~~~~-~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 228 (553)
+++|+.|... ..+.+.....+ ..+....... ..........-... ..-...+.........++ +
T Consensus 179 ~~~l~~~~~~~--~~~~d~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~f~~~e~~~~~p~~~~~-l 255 (495)
T PRK14995 179 ARYVPRQAGRR--DQPLNLGHALMLIVAILLLVYSAKTALKGFLSLWVTSLTLLTGALLLGLFIRTQLAASRPMIDMR-L 255 (495)
T ss_pred HHhCCCCCCCC--CCCCChHhHHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhcCCCCCcCHH-H
Confidence 4577765311 11111111000 0000000000 00000000000000 000000000011111122 2
Q ss_pred hhhcchhHHHHHHHHHHHHhhhhhHHHHhhHHHHHHh-hCCCC-ChHHHHHHHHHHHHHHHHHHhhhhcccCCcceeecc
Q psy15864 229 MRRTFLLPYAIVTSLFFIGQFGGMTTLQTYAVGIFES-IHAPL-DPYFATLLLGVAELGGALLCVVLIHYTGKRPLALIS 306 (553)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~-~~~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~ 306 (553)
++++.. ....+..+..........++.|.+++. .|++. +.....+...++.++++++.|++.||+|+|+.+..+
T Consensus 256 f~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~g 331 (495)
T PRK14995 256 FTHRII----LSGVVMAMTAMITLVGFELLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILVSRLGLRLVATGG 331 (495)
T ss_pred hCCccc----HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHH
Confidence 222222 222222233333344555677777654 46553 344666778888999999999999999999888777
Q ss_pred hhHHHHHHHHHHHHHHhhcccCCCCChhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHHHHH
Q psy15864 307 TGGSAACFIVVAVYAQFHLSYGWDSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVN 386 (553)
Q Consensus 307 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~ 386 (553)
+++.+++.+++..... ..+.+..++..++.|++.+....+.. ..+.+..|++.++.+.++.+.+..+|+.+++
T Consensus 332 ~~~~~~~~~~l~~~~~------~~~~~~~~~~~~l~G~g~g~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~lG~~~G~ 404 (495)
T PRK14995 332 MALSALSFYGLAMTDF------STQQWQAWGLMALLGFSAASALLAST-SAIMAAAPPEKAAAAGAIETMAYELGAGLGI 404 (495)
T ss_pred HHHHHHHHHHHHHhcC------CCchHHHHHHHHHHHHhHHHHHHHHH-HHHHhcCCHHhcchHHHHHHHHHHHHHHHHH
Confidence 7776666655443211 23344445566677777666554443 6677889999999999999999999999999
Q ss_pred HHhHHHHhh
Q psy15864 387 KLYYPMLDT 395 (553)
Q Consensus 387 ~~~~~~~~~ 395 (553)
.+.+.+.+.
T Consensus 405 ai~g~i~~~ 413 (495)
T PRK14995 405 AIFGLLLSR 413 (495)
T ss_pred HHHHHHHHH
Confidence 998887653
No 54
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.69 E-value=4.4e-17 Score=168.97 Aligned_cols=286 Identities=11% Similarity=0.038 Sum_probs=162.4
Q ss_pred cccccccccc--hhhhhhhhhccCcccccchhchhhhhHHHHHHHHHhhcccc----chHHHHHHHHHHHHHHHHHhcc-
Q psy15864 91 TFLYKMAAPL--VLVLTYVAEITQPHLRGMLSATASMTTIFGTVSQLFLGSFL----HWRSAAILNLLFPILALCALYF- 163 (553)
Q Consensus 91 r~~~G~ga~~--~~~~~~i~e~~p~~~Rg~~~~~~~~~~~lG~~l~~~l~~~l----gWr~~f~i~~i~~li~~i~~~~- 163 (553)
|++.|++.+. +...+++.++++ ++|+++.++...+..+|..+++.+++.+ |||+.|++.+++.++++++.++
T Consensus 115 ~~l~G~~~~~~~~~~~~~~~~~~~-~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~gwr~~f~~~~~~~~~~~v~~~~~ 193 (455)
T TIGR00892 115 GFITGLGLAFNFQPSLTMLGKYFY-RRRPLANGLAMAGSPVFLSTLAPLNQYLFESFGWRGSFLILGGLLLHCCVCGALM 193 (455)
T ss_pred HHHHHhcchhhhhHHHHHHHHHHH-hhHHHHHHHHHhcccHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHh
Confidence 5777777653 455577789885 7899999999999999998888877654 9999999999888766544433
Q ss_pred ccCCceeeeecCChHHHHHHHHHHcCCCCCcchHHHHHHHHHHHHHHHHHhcCCCCCCChhhhhhhhhcchhHHHHHHHH
Q psy15864 164 IPESPHWLISQGRMQEASASLCWLRGWVTPDKVQTELSQITKAIEESELKRLGKDGQRRPNYRMYMRRTFLLPYAIVTSL 243 (553)
Q Consensus 164 lpEsp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (553)
.++.+... ....++ .. ........+.... .... ........+. +++++.. +...+
T Consensus 194 ~~~~~~~~--~~~~~~-~~---~~~~~~~~~~~~~--~~~~------------~~~~~~~~~~-~~~~~~~----~~~~~ 248 (455)
T TIGR00892 194 RPVGPSQR--VSKSKS-KE---GLPPDGSTKKLSK--KSTA------------EKINRFLDFS-LFTHRGF----LVYLS 248 (455)
T ss_pred CCCCcccc--cccccc-cc---cCCCCCccccccc--cchh------------hhhhhhcchH-HhcCchH----HHHHH
Confidence 33222100 000000 00 0000000000000 0000 0000000111 2222222 22222
Q ss_pred HHHHhhhhhHHHHhhHHHHHHhhCCCCC-hHHHHHHHHHHHHHHHHHHhhhhccc--CCcceeecchhHH--HHHHHHHH
Q psy15864 244 FFIGQFGGMTTLQTYAVGIFESIHAPLD-PYFATLLLGVAELGGALLCVVLIHYT--GKRPLALISTGGS--AACFIVVA 318 (553)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~i~~~~g~~~~g~l~dr~--Grr~~l~~~~~~~--~i~~~~~~ 318 (553)
..+....+......+++.+..+.+++.. ..+...+.+++.+++.+++|+++||. ++|+...++..+. +++.++..
T Consensus 249 ~~~l~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll~~ 328 (455)
T TIGR00892 249 GNVIMFLGFFAPIIFLVPYAKDKGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLLCA 328 (455)
T ss_pred HHHHHHHHccchHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHHHHH
Confidence 2222223333444566666666666543 34666677888899999999999974 3333333222222 22222222
Q ss_pred HHHHhhcccCCCCChhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhHHHHhhcc-
Q psy15864 319 VYAQFHLSYGWDSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYYPMLDTFH- 397 (553)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~~~g- 397 (553)
. ..+.+.+++..++.+++.+..... .++++.|.+|++.+++++|+.+.+..++++++|.+.+.+.+..+
T Consensus 329 ~---------~~~~~~~~i~~~~~G~~~g~~~~~-~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~ 398 (455)
T TIGR00892 329 L---------AGDYTGLVIYCIFFGLSFGSVGAL-LFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDATKN 398 (455)
T ss_pred H---------hchHHHHHHHHHHHHHHhchHHHH-HHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeeehhcCC
Confidence 1 334555566666777766544433 35788899999999999999999999999999999999888775
Q ss_pred chhhHHHHHHHHHHH
Q psy15864 398 LWGTLYFYAAISVVG 412 (553)
Q Consensus 398 ~~~~~~~~~~~~~~~ 412 (553)
+...+.+.+++.++.
T Consensus 399 ~~~~f~~~~~~~li~ 413 (455)
T TIGR00892 399 YKYIFYASGSIVVSA 413 (455)
T ss_pred cchHHHHhhHHHHHH
Confidence 444555444444333
No 55
>PRK10504 putative transporter; Provisional
Probab=99.69 E-value=7e-16 Score=161.29 Aligned_cols=295 Identities=12% Similarity=0.064 Sum_probs=170.0
Q ss_pred ccccccccccc--chhhhhhhhhccCcccccchhchhhhhHHHHHHHHHhhcccc----chHHHHHHHHHHHHHHHHHhc
Q psy15864 89 KGTFLYKMAAP--LVLVLTYVAEITQPHLRGMLSATASMTTIFGTVSQLFLGSFL----HWRSAAILNLLFPILALCALY 162 (553)
Q Consensus 89 ~gr~~~G~ga~--~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~lG~~l~~~l~~~l----gWr~~f~i~~i~~li~~i~~~ 162 (553)
-.|+++|++.+ .+...+++.|++|+++|+.+.++...+..+|.++++.+++.+ +||+.|++.++++++..++..
T Consensus 103 ~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~~gw~~~f~~~~~~~~l~~~~~~ 182 (471)
T PRK10504 103 LARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEYASWHWIFLINIPVGIIGAIATL 182 (471)
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhccHHHHHHHHHHHHHHHHHHHH
Confidence 46888888765 456778899999999999999999999999998888887655 999999998887776654443
Q ss_pred c-ccCCceeeeecCChHHHHHHHH-------H--HcCCCCCcchHHHHHH-HHHHHH--HHHHHhcCCCCCCChhhhhhh
Q psy15864 163 F-IPESPHWLISQGRMQEASASLC-------W--LRGWVTPDKVQTELSQ-ITKAIE--ESELKRLGKDGQRRPNYRMYM 229 (553)
Q Consensus 163 ~-lpEsp~~l~~~~~~~~a~~~l~-------~--~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 229 (553)
. .|+.+. ...+.+....... . ................ ..-... .................+ ++
T Consensus 183 ~~~~~~~~---~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~ 258 (471)
T PRK10504 183 MLMPNYTM---QTRRFDLSGFLLLAVGMATLTLALDGSKGLGLSPLAIAGLVAVGVVALLLYLLHARNNNRALFSLK-LF 258 (471)
T ss_pred HhCCCccc---cCCCCChHHHHHHHHHHHHHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHHHhcCCCCccCHH-Hh
Confidence 3 554431 1112221111100 0 0010000000000000 000000 000000000111111222 23
Q ss_pred hhcchhHHHHHHHHHHHHhhhhhHHHHhhHHHHHHh-hCCCCC-hHHHHHHHHHHHHHHHHHHhhhhcccCCcceeecch
Q psy15864 230 RRTFLLPYAIVTSLFFIGQFGGMTTLQTYAVGIFES-IHAPLD-PYFATLLLGVAELGGALLCVVLIHYTGKRPLALIST 307 (553)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~-~~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~ 307 (553)
+++.....++.. +....+......+.|.+++. .|.+.. ..+..+...++.+++.++.++++||+|||+++.++.
T Consensus 259 ~~~~~~~~l~~~----~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~g~~~~~~~~~ 334 (471)
T PRK10504 259 RTRTFSLGLAGS----FAGRIGSGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRFGYRRVLVATT 334 (471)
T ss_pred cccchHHHHHHH----HHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHH
Confidence 333222222222 22222334444556666653 455432 335555667777888899999999999999988887
Q ss_pred hHHHHHHHHHHHHHHhhcccCCCCChhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHHHHHH
Q psy15864 308 GGSAACFIVVAVYAQFHLSYGWDSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNK 387 (553)
Q Consensus 308 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~ 387 (553)
++.+++.+++.+... ..+.+...+..++.+++.+....+. ..++.+.+|++.|+.+.|+.++...++..+++.
T Consensus 335 ~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~ 407 (471)
T PRK10504 335 LGLALVSLLFMLVAL------LGWYYLLPFVLFLQGMVNSTRFSSM-NTLTLKDLPDNLASSGNSLLSMIMQLSMSIGVT 407 (471)
T ss_pred HHHHHHHHHHHhccc------cccHHHHHHHHHHHHHHHHHHHHHH-HHHHHHcCCHHhccchHHHHHHHHHHHHHHHHH
Confidence 777776665554210 1222222333444455555554444 377788999999999999999999999999999
Q ss_pred HhHHHHhhccc
Q psy15864 388 LYYPMLDTFHL 398 (553)
Q Consensus 388 ~~~~~~~~~g~ 398 (553)
+.+.+.+..++
T Consensus 408 i~g~ll~~~g~ 418 (471)
T PRK10504 408 IAGLLLGLFGQ 418 (471)
T ss_pred HHHHHHHHhhh
Confidence 99988766553
No 56
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.68 E-value=5.3e-16 Score=149.85 Aligned_cols=277 Identities=14% Similarity=0.144 Sum_probs=189.5
Q ss_pred ccccccccc-cchhhhhhhhhccCcccccchhchhhhhHHHHHHH----HHhhccccc---hHHHHHHHHHHHHHHHHHh
Q psy15864 90 GTFLYKMAA-PLVLVLTYVAEITQPHLRGMLSATASMTTIFGTVS----QLFLGSFLH---WRSAAILNLLFPILALCAL 161 (553)
Q Consensus 90 gr~~~G~ga-~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~lG~~l----~~~l~~~lg---Wr~~f~i~~i~~li~~i~~ 161 (553)
.+++.|+++ .+.+...+++.|+|++++|.++|+.. ..++|..+ +|++....+ ||....+..++.++..++.
T Consensus 111 ~gll~G~~GasFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~~~g~~~w~~~~~i~~~~l~v~~v~~ 189 (417)
T COG2223 111 IGLLLGLAGASFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVAVAFGFLAWRNVAGIYVVALAIAAVLA 189 (417)
T ss_pred HHHHHhcccceehcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH
Confidence 356777765 57888999999999999999999998 66666655 455555557 9999998888887765554
Q ss_pred cc-ccCCceeeeecCChHHHHHHHHHHcCCCCCcchHHHHHHHHHHHHHHHHHhcCCCCCCChhhhhhhhhcchhHHHHH
Q psy15864 162 YF-IPESPHWLISQGRMQEASASLCWLRGWVTPDKVQTELSQITKAIEESELKRLGKDGQRRPNYRMYMRRTFLLPYAIV 240 (553)
Q Consensus 162 ~~-lpEsp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (553)
++ +.+.|......+... ...++... ..+-.|.
T Consensus 190 ~~~~~d~p~~r~~~~~~~-------------------------------------------~~~~~~v~----~~~~~W~ 222 (417)
T COG2223 190 WLGMNDVPEHRASVKPQL-------------------------------------------PAQLKAVF----SNKDTWL 222 (417)
T ss_pred HHHhCCChhhhccccccc-------------------------------------------hhHHHHHh----cCcchHH
Confidence 44 666553211000000 00111112 2223455
Q ss_pred HHHHHHHhhhhhHHHHhhHHHHHHh-hCCCCC-hHHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHHHHH
Q psy15864 241 TSLFFIGQFGGMTTLQTYAVGIFES-IHAPLD-PYFATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAACFIVVA 318 (553)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~-~~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~ 318 (553)
.++.++..+.++..+..++|.++.. ++.+.. +........+.+.+..+++|+++||+|.++++++.+..++++..+..
T Consensus 223 lsllY~~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~~~f~~~~~~~~~l~ 302 (417)
T COG2223 223 LSLLYFATFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRIGGRRVTLAVFVGMALAAALLS 302 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhccchhHHHHHHHHHHHHHHHHH
Confidence 6666777788888888999988864 555433 33666667777888889999999999999999888888888877776
Q ss_pred HHHHhhcccCCCCChhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhHHHHhhccc
Q psy15864 319 VYAQFHLSYGWDSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYYPMLDTFHL 398 (553)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~~~g~ 398 (553)
+...... ...+.+..+...+..+++.+.+-+.+ +-.+..++|.+. |.+.|+...++.+|++..|..++...+..+.
T Consensus 303 ~~~~~~~--~~~~~~~~~~~~l~l~~~~G~GnGsv-fk~Ip~if~~~~-G~v~G~vga~G~lGGf~lp~~~g~~~~~tg~ 378 (417)
T COG2223 303 LFLTGFG--HGGSFVVFVAVFLALFVFAGLGNGSV-FKMIPVIFPKET-GAVTGIVGAIGGLGGFFLPLAFGVSLDLTGS 378 (417)
T ss_pred ccccccc--cCcchHHHHHHHHHHHHHhccCcchh-eeechHHHHhhh-hHHHHHHHHhccccccchhHHHHHHHHhccc
Confidence 5321000 01334444555566666677776666 588888888755 8889999999999999999999999988883
Q ss_pred -hhhHHHHHHHHHHHHhhheE
Q psy15864 399 -WGTLYFYAAISVVGTLYMYF 418 (553)
Q Consensus 399 -~~~~~~~~~~~~~~~~~~~~ 418 (553)
...+.++..+.+++.++.+.
T Consensus 379 ~~~~f~~~~~~~~~a~v~~~~ 399 (417)
T COG2223 379 YTGAFMLLLAFYLVALVLTWA 399 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 44555555555555555443
No 57
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.68 E-value=1.3e-15 Score=155.95 Aligned_cols=265 Identities=15% Similarity=0.045 Sum_probs=160.9
Q ss_pred cccccccccccc--hhhhhhhhhccCcccccchhchhhhhHHHHHHHHHhhcccc----chHHHHHHHHHHHHHHHHHh-
Q psy15864 89 KGTFLYKMAAPL--VLVLTYVAEITQPHLRGMLSATASMTTIFGTVSQLFLGSFL----HWRSAAILNLLFPILALCAL- 161 (553)
Q Consensus 89 ~gr~~~G~ga~~--~~~~~~i~e~~p~~~Rg~~~~~~~~~~~lG~~l~~~l~~~l----gWr~~f~i~~i~~li~~i~~- 161 (553)
-.|+++|++.+. ++..+++.|++|+++|++..++...+..+|.++++.++..+ +||++|++.++++++.++..
T Consensus 106 ~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~~w~~~~~~~~~~~~~~~~~~~ 185 (406)
T PRK15402 106 LLRFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIHVLPWRGMFVLFAALAALSFFGLW 185 (406)
T ss_pred HHHHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHH
Confidence 357888877653 56778899999999999999988887777888887776554 89999999888887765544
Q ss_pred ccccCCceeeeecCChHHHHHHHHHHcCCCCCcchHHHHHHHHHHHHHHHHHhcCCCCCCChhhhhhhhhcchhHHHHHH
Q psy15864 162 YFIPESPHWLISQGRMQEASASLCWLRGWVTPDKVQTELSQITKAIEESELKRLGKDGQRRPNYRMYMRRTFLLPYAIVT 241 (553)
Q Consensus 162 ~~lpEsp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (553)
+++||+++....+. . ..+.. ..++..++++......+..
T Consensus 186 ~~~~~~~~~~~~~~-------------------~----~~~~~------------------~~~~~~~~~~~~~~~~~~~ 224 (406)
T PRK15402 186 RAMPETAGRVGEKL-------------------S----LKELG------------------RDYKLVLKNRRFVAGALAL 224 (406)
T ss_pred HhCCCCCccccccc-------------------c----HHHHH------------------HHHHHHHcCcHHHHHHHHH
Confidence 44777653210000 0 00000 0111222222221111111
Q ss_pred HHHHHHhhhhhHHHHhhHHHHH-HhhCCCCCh-HHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHHHHHH
Q psy15864 242 SLFFIGQFGGMTTLQTYAVGIF-ESIHAPLDP-YFATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAACFIVVAV 319 (553)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~-~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~ 319 (553)
+...........+.|.++ +..+.+... .+..+...++.++|.++.++++||+++|+.+.++.++.+++.+++..
T Consensus 225 ----~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~ 300 (406)
T PRK15402 225 ----GLVSLPLLAWIALSPVILISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSRRPLRSLIRMGLWPMVAGLLLAAL 300 (406)
T ss_pred ----HHHHHHHHHHHHHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH
Confidence 111111222333455554 334554332 24444556778899999999999999999888877777666666554
Q ss_pred HHHhhcccCCCCChhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhHHHHhhccch
Q psy15864 320 YAQFHLSYGWDSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYYPMLDTFHLW 399 (553)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~~~g~~ 399 (553)
..... ..+.+..++..++.+++.+...... ..... ..+++.||+..++.+....++..+++.+.+.+.+..+++
T Consensus 301 ~~~~~----~~~~~~~~~~~~~~g~g~~~~~~~~-~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~ 374 (406)
T PRK15402 301 ATVIS----SHAYLWLTAGLSLYAFGIGLANAGL-YRLTL-FSSDVSKGTVSAAMGMLSMLIFTVGIELSKHAYLGGGNG 374 (406)
T ss_pred HHHcc----cccHHHHHHHHHHHHHHHHHHhhhH-HHHHh-hhccccccHHHHHHHHHHHHHHHHHHHHHHhcccCCchH
Confidence 32110 1233344455555666554443332 23332 334588999999999999999999999999887776654
Q ss_pred hhHHH
Q psy15864 400 GTLYF 404 (553)
Q Consensus 400 ~~~~~ 404 (553)
...+.
T Consensus 375 ~~~~~ 379 (406)
T PRK15402 375 LFNLF 379 (406)
T ss_pred HHHHH
Confidence 43333
No 58
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.68 E-value=4.7e-16 Score=157.47 Aligned_cols=277 Identities=10% Similarity=0.017 Sum_probs=170.7
Q ss_pred ccccccccccccc-chhhhhhhhhccCcccccchhchhhhhHHHHHH----HHHhhcc------------------ccch
Q psy15864 87 EEKGTFLYKMAAP-LVLVLTYVAEITQPHLRGMLSATASMTTIFGTV----SQLFLGS------------------FLHW 143 (553)
Q Consensus 87 ~~~gr~~~G~ga~-~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~lG~~----l~~~l~~------------------~lgW 143 (553)
---.|++.|+++. ++....++++|+|+++||+++|+...+.++|.. ++|.+.. ..+|
T Consensus 131 lli~r~l~Gigg~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~i~~~l~~~~G~~~~~~~~g~~~~~ 210 (462)
T PRK15034 131 FIVIALLCGFAGANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPLVIFVPVFAFLGVNGVPQADGSVMSL 210 (462)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhccccccccccchHHH
Confidence 3445788888654 556778899999999999999999655555554 4443221 1248
Q ss_pred HHHHHHHHHHHHHHHHHhcc-ccCCceeeeecCChHHHHHHHHHHcCCCCCcchHHHHHHHHHHHHHHHHHhcCCCCCCC
Q psy15864 144 RSAAILNLLFPILALCALYF-IPESPHWLISQGRMQEASASLCWLRGWVTPDKVQTELSQITKAIEESELKRLGKDGQRR 222 (553)
Q Consensus 144 r~~f~i~~i~~li~~i~~~~-lpEsp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (553)
|.++++.+++.+++.++.++ +++.|. .+...
T Consensus 211 ~~~~~~~~~~~iv~~i~~~~~~~~~~~---~~~~~--------------------------------------------- 242 (462)
T PRK15034 211 ANAAWIWVPLLAIATIAAWSGMNDIAS---SRASI--------------------------------------------- 242 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCccc---cccCH---------------------------------------------
Confidence 88888888877776555544 444321 00000
Q ss_pred hhhhhhhhhcchhHHHHHHHHHHHHhhhhhHHHHhhHHHHHHhhCCCCC-hHHHHHHHHHHHHHHHHHHhhhhcccCCcc
Q psy15864 223 PNYRMYMRRTFLLPYAIVTSLFFIGQFGGMTTLQTYAVGIFESIHAPLD-PYFATLLLGVAELGGALLCVVLIHYTGKRP 301 (553)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~i~~~~g~~~~g~l~dr~Grr~ 301 (553)
......++ .+..+.+.+.+++.+.++..+.+++|.+.... ++.. ......+..+...++.+++|+++||+|+++
T Consensus 243 ~~~~~vlk----~~~~Wllslly~~tFG~fvg~s~~lp~~~~~~-~~~~~~l~~~~l~~l~~~l~rplgG~LADRiG~~~ 317 (462)
T PRK15034 243 ADQLPVLQ----RLHLWLLSLLYLATFGSFIGFSAGFAMLAKTQ-FPDVNILRLAFFGPFIGAIARSVGGAISDKFGGVR 317 (462)
T ss_pred HHHHHHhC----CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHH-cChHHHHHHHHHHHHHHHHHHHhhHHHHHhcCchH
Confidence 00011111 12234445555666667777777888887653 3222 222234456777888899999999999999
Q ss_pred eeecchhHHHHHHHHHHHHHHhhcccCCCCChhHHHHHHHHHHHHhhhhccccceeecccccc-----------------
Q psy15864 302 LALISTGGSAACFIVVAVYAQFHLSYGWDSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPN----------------- 364 (553)
Q Consensus 302 ~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~----------------- 364 (553)
++++++++++++.+.+..... .....+.+...+..++..++.|.+.+++ +-++..++|.
T Consensus 318 vl~~~~i~~~i~~~~~~l~lp---~~~~~~~~~~~~~~~~l~~~~G~gngsv-fk~ip~~f~~~~~~~~~~~~~~~~~~~ 393 (462)
T PRK15034 318 VTLINFIFMAIFSALLFLTLP---GTGSGNFIAFYAVFMGLFLTAGLGSGST-FQMIAVIFRQITIYRVKMKGGSDEQAQ 393 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHhc---cccccHHHHHHHHHHHHHHHhcccchHH-HHhhHHHHhhhhhhcccccccchhHHh
Confidence 998888777666644333221 0001223333333333344444554444 4566677774
Q ss_pred ----chhhhhhhHHHHHHHHHHHHHHHHhHHHHhhccchh-hHHHHHHHHHHHHhhheEEc
Q psy15864 365 ----NIRATASGASGSSSYIFAFAVNKLYYPMLDTFHLWG-TLYFYAAISVVGTLYMYFVM 420 (553)
Q Consensus 365 ----~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~ 420 (553)
+.-|.+.|+....+.+|+++.|.+++...+..+.+. .+..+.+..+++.++.|.++
T Consensus 394 ~~~~~~~g~v~G~v~a~G~~Ggf~~p~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~w~~y 454 (462)
T PRK15034 394 REAVTETAAALGFISAIGAVGGFFIPQAFGMSLNMTGSPVGAMKVFLIFYIVCVLLTWLVY 454 (462)
T ss_pred hHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHh
Confidence 145778889999999999999999998887766444 45556666666666666544
No 59
>KOG0254|consensus
Probab=99.68 E-value=2.9e-16 Score=165.32 Aligned_cols=156 Identities=21% Similarity=0.094 Sum_probs=128.4
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHHHHHHHHHhhcccCCCCChhHHHHHHHHHHHHhhhhcc
Q psy15864 273 YFATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAACFIVVAVYAQFHLSYGWDSPLVPTVFLVLAAFLTHICIRL 352 (553)
Q Consensus 273 ~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (553)
.+..+...+++++|++++|+++|++|||.+++++.++..++++++++ +.+.+++++++++.|++.|.....
T Consensus 92 s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~~~~iG~ii~~~---------a~~~~~l~~GR~l~G~g~G~~~~~ 162 (513)
T KOG0254|consen 92 GLLTSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLFLIGAIIIAL---------APSWYQLIVGRILTGLGVGGASVL 162 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHH---------hhhHHHHHHHHHHhccchhhhhhc
Confidence 58888999999999999999999999999999999999999999998 678899999999999999988877
Q ss_pred ccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhHHHHhhc-cchhhHHHHHHHHHHHHhhheEEcccC------CC
Q psy15864 353 LPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYYPMLDTF-HLWGTLYFYAAISVVGTLYMYFVMPET------EG 425 (553)
Q Consensus 353 ~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~pet------~~ 425 (553)
++ .|++|+.|++.||...++.+....+|..++ ++.++..... ..|+.++..+.++.+..++.++++||+ ++
T Consensus 163 ~p-iy~sEiap~~~RG~l~~~~~l~~~~Gi~~~-~~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~~~~~pesp~~L~~~g 240 (513)
T KOG0254|consen 163 AP-VYISEIAPAHIRGTLVSLYQLFITIGILLG-YCINYGTSKVYAGWRIPLGLALIPAVILALGMLFLPESPRWLIEKG 240 (513)
T ss_pred ch-hhHhhcCChhhhHHHHHHHHHHHHHHHHHH-HHHhhhhccCCccHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHcC
Confidence 76 999999999999999988887777555444 6666665543 135555555555555555558889998 57
Q ss_pred CChHHHHHHHhccC
Q psy15864 426 RTLRDIEEHFADKG 439 (553)
Q Consensus 426 ~~~~~~~~~~~~~~ 439 (553)
+..++...+...++
T Consensus 241 ~~~~a~~~l~~l~g 254 (513)
T KOG0254|consen 241 RLEEAKRSLKRLRG 254 (513)
T ss_pred ChHHHHHHHHHHhC
Confidence 77888888887777
No 60
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.68 E-value=2.4e-16 Score=159.59 Aligned_cols=279 Identities=14% Similarity=0.039 Sum_probs=159.2
Q ss_pred cccccccccc--chhhhhhhhhccCcccccchhchhhhhHHHHHHHHH-hhccc----cchHHHHHHHHHHHHHHH-HHh
Q psy15864 90 GTFLYKMAAP--LVLVLTYVAEITQPHLRGMLSATASMTTIFGTVSQL-FLGSF----LHWRSAAILNLLFPILAL-CAL 161 (553)
Q Consensus 90 gr~~~G~ga~--~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~lG~~l~~-~l~~~----lgWr~~f~i~~i~~li~~-i~~ 161 (553)
.|++.|++.+ .+...+++.|++|+++|++++++...+..+|.++++ +++.. .+||+.|++.+++.++.. +.+
T Consensus 89 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (379)
T TIGR00881 89 LWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYSWHWVFIVPGIIAIIVSLICF 168 (379)
T ss_pred HHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHh
Confidence 5777777654 457778999999999999999999999999999988 34433 289999999888777664 444
Q ss_pred ccccCCceeeeecCChHHHHHHHHHHcCCCCCcchHHHHHHHHHHHHHHHHHhcCCCCCCChhhhhhhhhcchhHHHHHH
Q psy15864 162 YFIPESPHWLISQGRMQEASASLCWLRGWVTPDKVQTELSQITKAIEESELKRLGKDGQRRPNYRMYMRRTFLLPYAIVT 241 (553)
Q Consensus 162 ~~lpEsp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (553)
++++|+|+....+...+.. .+..+... .. ..............+.+.+. ++..
T Consensus 169 ~~~~~~~~~~~~~~~~~~~----------~~~~~~~~-----------~~--~~~~~~~~~~~~~~~~~~~~----~~~~ 221 (379)
T TIGR00881 169 LLLRDSPQSCGLPPAEEMP----------NEEPDGDA-----------EK--KEEELTKKQIFLQYVLLNKV----LWYI 221 (379)
T ss_pred eeeCCCccccccCccccCc----------cccccccc-----------cc--ccccccchHHHHHHHHhcch----HHHH
Confidence 5577766421100000000 00000000 00 00000000111222222222 2222
Q ss_pred HHHHHHhhhhhHHHHhhHHHHHHh-hCCCCC-hHHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHHHHHH
Q psy15864 242 SLFFIGQFGGMTTLQTYAVGIFES-IHAPLD-PYFATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAACFIVVAV 319 (553)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~-~~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~ 319 (553)
.+..+........+..+.|.++.+ .+.+.. ......+..++.+++.+++++++||+.+++.........+...+.+..
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~ 301 (379)
T TIGR00881 222 SLGYVFVYVVRTGILDWSPLYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFFMALIIVSLLV 301 (379)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHH
Confidence 222333333344555666766643 465533 346666778889999999999999864433322222221111111111
Q ss_pred HHHhhcccCCCCChhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhHHHHhhccch
Q psy15864 320 YAQFHLSYGWDSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYYPMLDTFHLW 399 (553)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~~~g~~ 399 (553)
... ....+.+..++..++.+++.. +..+....+++|.+|++.|+++.|+.+.+..+++.++|.+.+.+.+..++.
T Consensus 302 ~~~----~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~ 376 (379)
T TIGR00881 302 YWL----NPAANPLMDLICLFALGFLVY-GPQMLIGVIASELAPKKAAGTAAGFVGFFAYLGGILAGLPLGYLADGFGWA 376 (379)
T ss_pred Hhc----CcchhHHHHHHHHHHHHHHHh-hhhHHHHHHHHHhcCcchhHHHHHHHHHhhhhhhhhhhhhHHHHHHhhccc
Confidence 110 001122233333344443332 222333467899999999999999999999999999999999999887754
Q ss_pred h
Q psy15864 400 G 400 (553)
Q Consensus 400 ~ 400 (553)
.
T Consensus 377 ~ 377 (379)
T TIGR00881 377 G 377 (379)
T ss_pred c
Confidence 3
No 61
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.68 E-value=1.3e-15 Score=154.73 Aligned_cols=252 Identities=15% Similarity=0.172 Sum_probs=155.9
Q ss_pred ccccccccccc--chhhhhhhhhccCcccccchhchhhhhHHHHHHHHHhhcccc----chHHHHHHHHHHHHHHHHHh-
Q psy15864 89 KGTFLYKMAAP--LVLVLTYVAEITQPHLRGMLSATASMTTIFGTVSQLFLGSFL----HWRSAAILNLLFPILALCAL- 161 (553)
Q Consensus 89 ~gr~~~G~ga~--~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~lG~~l~~~l~~~l----gWr~~f~i~~i~~li~~i~~- 161 (553)
-.|+++|++.+ .+...+++.|++|+++|+++.++...+..+|.++++.+++.+ +||++|++.+++.++..++.
T Consensus 98 ~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (385)
T TIGR00710 98 VLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWLSWHAIFAFLSLAGILLSALIF 177 (385)
T ss_pred HHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHH
Confidence 36788888765 356678999999999999999999999999999988887764 89999999888877765444
Q ss_pred ccccCCceeeeecCChHHHHHHHHHHcCCCCCcchHHHHHHHHHHHHHHHHHhcCCCCCCChhhhhhhhhcchhHHHHHH
Q psy15864 162 YFIPESPHWLISQGRMQEASASLCWLRGWVTPDKVQTELSQITKAIEESELKRLGKDGQRRPNYRMYMRRTFLLPYAIVT 241 (553)
Q Consensus 162 ~~lpEsp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (553)
+++||+++... +.+. .... ..+....+++..+...+.
T Consensus 178 ~~~~~~~~~~~-~~~~-------------------~~~~----------------------~~~~~~~~~~~~~~~~~~- 214 (385)
T TIGR00710 178 FILPETLPYEA-RIQI-------------------STYF----------------------ETFLLLLKSKMFWGYALI- 214 (385)
T ss_pred HhCCCCCCCcc-cCCH-------------------HHHH----------------------HHHHHHHcCchhHHHHHH-
Confidence 44777643110 0000 0000 001111222222211111
Q ss_pred HHHHHHhhhhhHHHHhhHHHHHH-hhCCCCC-hHHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHHHHHH
Q psy15864 242 SLFFIGQFGGMTTLQTYAVGIFE-SIHAPLD-PYFATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAACFIVVAV 319 (553)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~-~~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~ 319 (553)
.............+.|.++. ..+.+.. ..+......++.+++.++.|++.||+|+|+.+..+.++..++.+++..
T Consensus 215 ---~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (385)
T TIGR00710 215 ---YGASFGGFFAFFSGAPFVYIDIMGVSPSVFGLLFALNIIAMIFGGFLNGRFIKKWGAKSLLRMGLILFAVSAVLLEI 291 (385)
T ss_pred ---HHHHHHHHHHHHHcChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH
Confidence 11222223334445565554 4555433 335566677889999999999999999999888777766666655544
Q ss_pred HHHhhcccCCCCChhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhHHH
Q psy15864 320 YAQFHLSYGWDSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYYPM 392 (553)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~ 392 (553)
..... .......++..++.+++.+..... ...+..|..| +.|+++.++.+.+.+.++.+.+.+.+.+
T Consensus 292 ~~~~~----~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~i~~~~~~~~ 358 (385)
T TIGR00710 292 TAILG----LGSWAMIIGPMMFVGIGNSMISSI-AMAYALEDFP-HVAGTASALFGTLRLVLGAIVGYLVSLI 358 (385)
T ss_pred HHHhc----cchHHHHHHHHHHHHHHHHHHHHH-HHHHHhccCc-ccchHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 32100 112223333344455545444433 3467778776 5789999998888887777777776633
No 62
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.68 E-value=5.2e-16 Score=159.72 Aligned_cols=263 Identities=14% Similarity=0.058 Sum_probs=156.8
Q ss_pred ccccchhchhhhhHHHHHHHHHhhcccc---chHHHHHHHHHHHHHHHHHhccc-cCCceeeeecCChHHHHHHHHHHcC
Q psy15864 114 HLRGMLSATASMTTIFGTVSQLFLGSFL---HWRSAAILNLLFPILALCALYFI-PESPHWLISQGRMQEASASLCWLRG 189 (553)
Q Consensus 114 ~~Rg~~~~~~~~~~~lG~~l~~~l~~~l---gWr~~f~i~~i~~li~~i~~~~l-pEsp~~l~~~~~~~~a~~~l~~~~~ 189 (553)
+++|...+....+..+|.++++++++.+ +|+++|++.++++++++++.+++ ++.++-.. .+ ++..
T Consensus 137 ~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~-------- 205 (420)
T PRK09528 137 RRSGFEYGRARMWGSLGWALCAFIAGILFNINPQINFWLGSGSALILLVLLFFAKPDAPSTAK--VA-NALG-------- 205 (420)
T ss_pred hhccccchhhHHhhhHHHHHHHHHHHHHHhcCchHhHHHHHHHHHHHHHHHhcccccccchhh--hc-cchh--------
Confidence 4567777888888888888888777765 89999999988887776666554 44322000 00 0000
Q ss_pred CCCCcchHHHHHHHHHHHHHHHHHhcCCCCCCChhhhhhhhhcchhHHHHHHHHHHHHhhhhhHHHHhhHHHHHHhhCCC
Q psy15864 190 WVTPDKVQTELSQITKAIEESELKRLGKDGQRRPNYRMYMRRTFLLPYAIVTSLFFIGQFGGMTTLQTYAVGIFESIHAP 269 (553)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 269 (553)
.+.. ..........++++..+...+..+...+........+..|+..++...+.+
T Consensus 206 ~~~~-------------------------~~~~~~~~~~l~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (420)
T PRK09528 206 ANAS-------------------------AVSLKDALALLKLPKFWFLVLYVIGVACFYDVFDQQFPNFFASFFATPEQG 260 (420)
T ss_pred cccc-------------------------cccHHHHHHHccCCCeEeehHHHHHHHHHHHHHHHHHHHHHHHHHhccCcc
Confidence 0000 000001111222222222222221111111111112333333333222322
Q ss_pred CC-hHHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHHHHHHHHHhhcccCCCCChhHHHHHHHHHHHHhh
Q psy15864 270 LD-PYFATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAACFIVVAVYAQFHLSYGWDSPLVPTVFLVLAAFLTHI 348 (553)
Q Consensus 270 ~~-~~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (553)
.. ..+...+..++.+++.+++|+++||+|+|+.+.++.++.+++.+++.+ ..+.+.+++...+.++..+.
T Consensus 261 ~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~---------~~~~~~~~~~~~l~g~~~~~ 331 (420)
T PRK09528 261 TRVFGYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGF---------ATGPLEVSILKLLHAFEVPF 331 (420)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHh---------cccHHHHHHHHHHHHHHHHH
Confidence 22 234555666778899999999999999999988877777776666554 44556666666666655544
Q ss_pred hhccccceeeccccccchhhhhhhH-HHHHHHHHHHHHHHHhHHHHhhccchhhHHHHHHHHHHHHhhheEEccc
Q psy15864 349 CIRLLPWMLIGEVFPNNIRATASGA-SGSSSYIFAFAVNKLYYPMLDTFHLWGTLYFYAAISVVGTLYMYFVMPE 422 (553)
Q Consensus 349 ~~~~~~~~~~~e~~p~~~Rg~~~~~-~~~~~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~pe 422 (553)
..... ..++.+.+|++.|++..++ .+....+++++++.+.|.+.+..|+...+.+.+++.++..++.++++++
T Consensus 332 ~~~~~-~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~G~~~~f~~~~~~~~i~~~~~~~~~~~ 405 (420)
T PRK09528 332 LLVGV-FKYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSIGFQGTYLILGGIVLLFTLISVFTLSG 405 (420)
T ss_pred HHHHH-HHHHHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHhcC
Confidence 43333 4788899999999988765 5666889999999999999998887777777777766666555544443
No 63
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.67 E-value=1.3e-15 Score=160.01 Aligned_cols=293 Identities=14% Similarity=0.044 Sum_probs=175.8
Q ss_pred cccccccccccc--chhhhhhhhhccCcccccchhchhhhhHHHHHHHHHhhcccc----chHHHHHHHHHHHHHHHHHh
Q psy15864 88 EKGTFLYKMAAP--LVLVLTYVAEITQPHLRGMLSATASMTTIFGTVSQLFLGSFL----HWRSAAILNLLFPILALCAL 161 (553)
Q Consensus 88 ~~gr~~~G~ga~--~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~lG~~l~~~l~~~l----gWr~~f~i~~i~~li~~i~~ 161 (553)
--+|+++|++.+ .+...+++.|++|+++|+++++++.++..+|.++++.+++++ +||++|++.++++++.+++.
T Consensus 94 ~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~w~~~f~~~~~~~~~~~~~~ 173 (485)
T TIGR00711 94 IIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENYHWRWIFLINVPIGIIVVVVA 173 (485)
T ss_pred HHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCcCceehhhhhhHHHHHHHHHH
Confidence 357888888765 356778999999999999999999999999999998887765 99999999988887775544
Q ss_pred -ccccCCceeeeecCChHHHHHHH--------H-HH-cCCCCCcchHHHHH-HHHHH----HHHHHHHhcCCCCCCChhh
Q psy15864 162 -YFIPESPHWLISQGRMQEASASL--------C-WL-RGWVTPDKVQTELS-QITKA----IEESELKRLGKDGQRRPNY 225 (553)
Q Consensus 162 -~~lpEsp~~l~~~~~~~~a~~~l--------~-~~-~~~~~~~~~~~~~~-~~~~~----~~~~~~~~~~~~~~~~~~~ 225 (553)
+++|++++. .+.+.+.....+ . .. .............. ..... ........ .........
T Consensus 174 ~~~~~~~~~~--~~~~~d~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 249 (485)
T TIGR00711 174 FFILPRDKPA--ASENFDFLGLLLLSVGLGSLLYGLSEGPERGWFDSNEILILSITGLVAIIAFVVWEL--TDDNPLVDL 249 (485)
T ss_pred HHHcCCcccc--ccCCCcHHHHHHHHHHHHHHHHHHhhCCCCCCCCchHHHHHHHHHHHHHHHHHHHHH--cCCCCccCH
Confidence 346765431 111111111100 0 00 01101110000000 00000 00000000 001111112
Q ss_pred hhhhhhcchhHHHHHHHHHHHHhhhhhHHHHhhHHHHHHh-hCCCCC-hHHHHHHHHHHHHHHHHHHhhhhcccCCccee
Q psy15864 226 RMYMRRTFLLPYAIVTSLFFIGQFGGMTTLQTYAVGIFES-IHAPLD-PYFATLLLGVAELGGALLCVVLIHYTGKRPLA 303 (553)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~-~~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l 303 (553)
+ +++++......+ ..+......+...+++|.+++. .|.+.. ..+...+..++.+++.+++|++.||+|||+++
T Consensus 250 ~-~~~~~~~~~~~~----~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~ 324 (485)
T TIGR00711 250 R-LFKYRNFTIGCV----YMSLLGLGLYGSFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDKIDPRKLV 324 (485)
T ss_pred H-HHcCCChHHHHH----HHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcHHHH
Confidence 2 222222222222 2222233334445667777654 455543 34666677889999999999999999999988
Q ss_pred ecchhHHHHHHHHHHHHHHhhcccCCCCChhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHH
Q psy15864 304 LISTGGSAACFIVVAVYAQFHLSYGWDSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAF 383 (553)
Q Consensus 304 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~ 383 (553)
.++.++.+++.+++.+... ...+.+..+...++.+++.+....+.. ..+.+.+|++.|+++.|+.+.+..+++.
T Consensus 325 ~~g~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~g~g~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~g~~ 398 (485)
T TIGR00711 325 TIGLILYAVGFYWRAFTFT-----PDTPFLAIALPQFIRGFGMGCFFMPLT-TIALSGLPPHKIARGSSLSNFTRQLGGS 398 (485)
T ss_pred HHHHHHHHHHHHHHhccCC-----CCCCHHHHHHHHHHHHHHHHHHHHHHH-HHHHhcCCHHHHhHHHHHHHHHHHHHHH
Confidence 8777777666665542110 022334444555666666665555554 5566788999999999999999999999
Q ss_pred HHHHHhHHHHhh
Q psy15864 384 AVNKLYYPMLDT 395 (553)
Q Consensus 384 i~~~~~~~~~~~ 395 (553)
+++.+.+.+.++
T Consensus 399 ig~~i~g~~~~~ 410 (485)
T TIGR00711 399 IGTALITTILTN 410 (485)
T ss_pred HHHHHHHHHHHH
Confidence 999999888764
No 64
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.67 E-value=2.1e-15 Score=153.43 Aligned_cols=276 Identities=14% Similarity=0.027 Sum_probs=162.2
Q ss_pred ccccccccccc--chhhhhhhhhccCcccccchhchhhhhHHHHHHHHHhhcccc---chHHHHHHHHHHHHHHHHHhcc
Q psy15864 89 KGTFLYKMAAP--LVLVLTYVAEITQPHLRGMLSATASMTTIFGTVSQLFLGSFL---HWRSAAILNLLFPILALCALYF 163 (553)
Q Consensus 89 ~gr~~~G~ga~--~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~lG~~l~~~l~~~l---gWr~~f~i~~i~~li~~i~~~~ 163 (553)
-.|+++|++.+ .+...+++.|++|+++|++++++..+...+|.++||.+++.+ .|+..+++.++..++.++..++
T Consensus 93 ~~r~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~~~~~~~~i~~~~~~~~~~~~~~ 172 (393)
T PRK11195 93 LAYGLVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALADPHAEAALAVCALIYLLAALFNLF 172 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 35788888765 457778999999999999999999999999999999998877 5666666665554545555566
Q ss_pred ccCCceeeeecCChHHHHHHHHHHcCCCCCcchHHHHHHHHHHHHHHHHHhcCCCCCCChhhhhhhhhcchhHHHHHHHH
Q psy15864 164 IPESPHWLISQGRMQEASASLCWLRGWVTPDKVQTELSQITKAIEESELKRLGKDGQRRPNYRMYMRRTFLLPYAIVTSL 243 (553)
Q Consensus 164 lpEsp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (553)
+||+|....... .+. . ....+..+ .++.+++++..+..++...+
T Consensus 173 l~~~~~~~~~~~-~~~-~----------------~~~~~~~~------------------~~~~l~~~~~~~~~~~~~~~ 216 (393)
T PRK11195 173 IPRLGARRPGQS-WNP-I----------------ALLRDFFH------------------ACRVLWRDKLGRFSLAGTTL 216 (393)
T ss_pred CCCCcccccccC-CCH-H----------------HHHHHHHH------------------HHHHHHhCchhHHHHHHHHH
Confidence 888764211000 000 0 00000000 01122333333322222222
Q ss_pred HHHHhhhhhHHHHhhHHHHHHhhCCCC-ChHHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHHHHHHHHH
Q psy15864 244 FFIGQFGGMTTLQTYAVGIFESIHAPL-DPYFATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAACFIVVAVYAQ 322 (553)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~ 322 (553)
.++......+.+..|++.. .+.+. +..+..+..+++.++|+++.+++.|+.++++.+..+++ .++..+++..
T Consensus 217 ~~~~~~~~~~~~~~~~~~~---lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~~~~~~~~~g~~-~~~~~~~~~~--- 289 (393)
T PRK11195 217 FWGAGATLRFLVLAWAPVA---LGITLNQPAYLQAVVAIGIAVGAGAAARLVTLETVLRVLPAGIL-MGLVVLLMAL--- 289 (393)
T ss_pred HHHHHHHHHHHHHHHHHHH---cCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchHHHHHH-HHHHHHHHHH---
Confidence 2222222222222233322 34443 33466677888999999999999999998877665542 2222222222
Q ss_pred hhcccCCCCChhHHHHHHHHHHHHhhhhccccceeeccccccch-hhhhhhHHHHHHHHHHHHHHHHhHHHHhhccchhh
Q psy15864 323 FHLSYGWDSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNI-RATASGASGSSSYIFAFAVNKLYYPMLDTFHLWGT 401 (553)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~-Rg~~~~~~~~~~~~~~~i~~~~~~~~~~~~g~~~~ 401 (553)
..+.+..++..++.+++.+....+.. +.+.+..|++. +|++.++.+...+++..++..+.+.+ ...+....
T Consensus 290 ------~~~~~~~~~~~~~~G~~~g~~~~~~~-~~~q~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 361 (393)
T PRK11195 290 ------QHSLLPAYPLLILIGALGGFFVVPMN-ALLQHRGHVLVGAGHSIAVQNFNENLAMLLMLGLYSLL-VKLGVPVV 361 (393)
T ss_pred ------HhHHHHHHHHHHHHHHhhhhhhhhHH-HHHHhhCcccccchhHHHHHhHHHHHHHHHHHHHHHHH-HHcCCCHH
Confidence 22334444555566666555554443 66677766655 79999999999999999998887744 55565444
Q ss_pred HHHHHHHHHHHHhh
Q psy15864 402 LYFYAAISVVGTLY 415 (553)
Q Consensus 402 ~~~~~~~~~~~~~~ 415 (553)
+.+.+...++.+.+
T Consensus 362 ~~~~~~~~~~~~~~ 375 (393)
T PRK11195 362 AVIVGFGLLVALAM 375 (393)
T ss_pred HHHHHHHHHHHHHH
Confidence 44443333333333
No 65
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.67 E-value=1.1e-15 Score=177.51 Aligned_cols=256 Identities=17% Similarity=0.017 Sum_probs=159.6
Q ss_pred ccccccccccc--chhhhhhhhhccCcccccchhchhhhhHHHHHHHHHhhcccc-------------chHHHHHHHHHH
Q psy15864 89 KGTFLYKMAAP--LVLVLTYVAEITQPHLRGMLSATASMTTIFGTVSQLFLGSFL-------------HWRSAAILNLLF 153 (553)
Q Consensus 89 ~gr~~~G~ga~--~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~lG~~l~~~l~~~l-------------gWr~~f~i~~i~ 153 (553)
-.|+++|++.+ .+...+++.|++|+++|+++++++.++..+|.++|+++++++ +|++.+.+.+++
T Consensus 108 ~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (1146)
T PRK08633 108 AVTFLLGAQSAIYSPAKYGIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFLFESVNGNTPSEILGRIAPAGLVLLA 187 (1146)
T ss_pred HHHHHHHHHHHhhchHHHhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHHHhhccccccccccchHHHHHHHHH
Confidence 35777777665 356678999999999999999999999999999988877654 244444444333
Q ss_pred H-HHHHHHhccccCCceeeeecCChHHHHHHHHHHcCCCCCcchHHHHHHHHHHHHHHHHHhcCCCCCCChhhhhhhhhc
Q psy15864 154 P-ILALCALYFIPESPHWLISQGRMQEASASLCWLRGWVTPDKVQTELSQITKAIEESELKRLGKDGQRRPNYRMYMRRT 232 (553)
Q Consensus 154 ~-li~~i~~~~lpEsp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (553)
. ++.+++.+++|++|........... ... ..... ..+..+++.+
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~----~~~~~------------------~~~~~l~~~~ 232 (1146)
T PRK08633 188 VAVLGLIFAYRLPKVPAAAPEVFDKKK-------------YLF----PKLLW------------------RNLKLLRSDR 232 (1146)
T ss_pred HHHHHHHHHhcCcCCCCCCcccccccc-------------ccc----HHHHH------------------HHHHHHhcCc
Confidence 3 3334555667887653211100000 000 00000 1122223333
Q ss_pred chhHHHHHHHHHHHHhhhhhHHHHhhHHHHHH-hhCCCCC--hHHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhH
Q psy15864 233 FLLPYAIVTSLFFIGQFGGMTTLQTYAVGIFE-SIHAPLD--PYFATLLLGVAELGGALLCVVLIHYTGKRPLALISTGG 309 (553)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~--~~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~ 309 (553)
..+..++..++. +.....+..++|.++. ..+.+.. ..+..++.+++.++|++++++++||++++.++.+++++
T Consensus 233 ~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~ 308 (1146)
T PRK08633 233 VLWLAIIGLSYF----WFISQLAQANFPAYAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGLVPLGALG 308 (1146)
T ss_pred HHHHHHHHHHHH----HHHHHHHHHhhHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccchhHHHHH
Confidence 222222222222 2222233344455543 3566544 34666777888999999999999999999888877777
Q ss_pred HHHHHHHHHHHHHhhcccCCCCChhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHh
Q psy15864 310 SAACFIVVAVYAQFHLSYGWDSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLY 389 (553)
Q Consensus 310 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~ 389 (553)
++++.+++.+ ..+.+.++++.++++++.++...+. .+++.+.+|++.||+++|+.+++..+++++++.+.
T Consensus 309 ~~~~~~~~~~---------~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~ 378 (1146)
T PRK08633 309 LALSLFLLPT---------APSLASVLVLFFLFGFSAGLFIVPL-NALIQFRAPEKELGKVLAANNFLQNVGMLLFLALT 378 (1146)
T ss_pred HHHHHHHHHH---------hhhHHHHHHHHHHHHHHHHHhhHHH-HHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHHH
Confidence 7666665554 3345555666667777666555444 48888999999999999999999888887776665
Q ss_pred HHHH
Q psy15864 390 YPML 393 (553)
Q Consensus 390 ~~~~ 393 (553)
+.+.
T Consensus 379 ~~l~ 382 (1146)
T PRK08633 379 TLFS 382 (1146)
T ss_pred HHHH
Confidence 5443
No 66
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.66 E-value=2.2e-18 Score=179.13 Aligned_cols=155 Identities=19% Similarity=0.177 Sum_probs=119.1
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHHHHHHHHHhhcccCCC---CChhHHHHHHHHHHHHhhh
Q psy15864 273 YFATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAACFIVVAVYAQFHLSYGWD---SPLVPTVFLVLAAFLTHIC 349 (553)
Q Consensus 273 ~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 349 (553)
.+......++.++|++++|+++||+|||+.++++.++.+++.++.++ ++ +.+.+.+++++.|++.|..
T Consensus 49 ~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~~~i~~~~~~~---------~~~~~~~~~~~~~R~~~G~~~g~~ 119 (451)
T PF00083_consen 49 SLLTSSFFIGAIVGALIFGFLADRYGRKPALIISALLMIIGSILIAF---------APSYNNFWMLLIGRFLIGFGIGGA 119 (451)
T ss_pred HHHHHHHHhhhcccccccccccccccccccccccccccccccccccc---------cccccccccccccccccccccccc
Confidence 35667788999999999999999999999999999999999998887 55 7888999999999988877
Q ss_pred hccccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhHHHHhhcc---chhhHHHHHHHHHHHHhhheEEcccC---
Q psy15864 350 IRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYYPMLDTFH---LWGTLYFYAAISVVGTLYMYFVMPET--- 423 (553)
Q Consensus 350 ~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~~~g---~~~~~~~~~~~~~~~~~~~~~~~pet--- 423 (553)
....+ +|+.|+.|++.|+...++.+....+|..++..+...+ .... .|+....++.+..+..++..+++|||
T Consensus 120 ~~~~~-~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~-~~~~~~~~Wr~~~~~~~~~~l~~~~~~~~~pESP~w 197 (451)
T PF00083_consen 120 YVVSP-IYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIV-SYYSDNWGWRILLIFGAIPSLLVLLLRFFLPESPRW 197 (451)
T ss_pred ccccc-ccccccccccccccccccccccccccccccccccccc-ccccccccccccccccccccccccccccccccccce
Confidence 76665 9999999999999988888777766665555443322 2222 25666666666666667777899998
Q ss_pred ---CCCChHHHHHHHhcc
Q psy15864 424 ---EGRTLRDIEEHFADK 438 (553)
Q Consensus 424 ---~~~~~~~~~~~~~~~ 438 (553)
++|..++.+.+.+.+
T Consensus 198 L~~~~~~~~A~~~l~~~~ 215 (451)
T PF00083_consen 198 LLSKGRDEEAEKVLRKLR 215 (451)
T ss_pred eccccccccccccccccc
Confidence 555555555555533
No 67
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.66 E-value=4.1e-15 Score=152.11 Aligned_cols=262 Identities=13% Similarity=0.051 Sum_probs=149.0
Q ss_pred hhhhhhhhccCcccccchhchhhhhHHHHHHHHHhhccc-----cchHHHHHHHHHHHHHHHHHhccccCCceeeeecCC
Q psy15864 102 LVLTYVAEITQPHLRGMLSATASMTTIFGTVSQLFLGSF-----LHWRSAAILNLLFPILALCALYFIPESPHWLISQGR 176 (553)
Q Consensus 102 ~~~~~i~e~~p~~~Rg~~~~~~~~~~~lG~~l~~~l~~~-----lgWr~~f~i~~i~~li~~i~~~~lpEsp~~l~~~~~ 176 (553)
...+++.|++|+++|+++.++..+++.+|.++++.++.. .|||.+|++.+++.++.++..+++||+++... +
T Consensus 114 ~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~~gw~~~f~i~a~~~l~~~l~~~~~~e~~~~~~---~ 190 (402)
T PRK11902 114 VFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLADRVLGWGNTYLLMAGLMLAGALTTLWAPEPEVPAR---P 190 (402)
T ss_pred HHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHhcCCCccccc---c
Confidence 444888999999999999999999999999988875543 38999999988887776665666787654210 0
Q ss_pred hHHHHHHHHHHcCCCCCcchHHHHHHHHHHHHHHHHHhcCCCCCCChhhhhhhhhcchhHHHHHHHHHHHHhhhhhHHHH
Q psy15864 177 MQEASASLCWLRGWVTPDKVQTELSQITKAIEESELKRLGKDGQRRPNYRMYMRRTFLLPYAIVTSLFFIGQFGGMTTLQ 256 (553)
Q Consensus 177 ~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (553)
.+... +.. ...+..+++++..+..++..++........ ..
T Consensus 191 ~~~~~-------------------~~~------------------~~~~~~l~~~~~~~~~l~~~~l~~~~~~~~---~~ 230 (402)
T PRK11902 191 PRSLG-------------------EAV------------------VGPLRDFFSRRGAWALLLLIVLYKLGDAFA---GS 230 (402)
T ss_pred cchhH-------------------HHH------------------HHHHHHHHhCcCHHHHHHHHHHHHhHHHHH---HH
Confidence 00000 000 011223344444433333322222221111 11
Q ss_pred hhHHHHHHhhCCCCChH-HHHHHH-HHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHHHHHHHHHhhcccCCCCChh
Q psy15864 257 TYAVGIFESIHAPLDPY-FATLLL-GVAELGGALLCVVLIHYTGKRPLALISTGGSAACFIVVAVYAQFHLSYGWDSPLV 334 (553)
Q Consensus 257 ~~~~~~~~~~g~~~~~~-~~~~~~-~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 334 (553)
...+.+.+..|.+.... +..... .++.++|.++++++.||+|+|+.+.++.++.++..+.+...... ..+.+.
T Consensus 231 ~~~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l~~~~~~~~l~~l~~~~~~~~-----~~~~~~ 305 (402)
T PRK11902 231 LSTTFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLYRSLMLFGVLQAVSNLGYWVLAVT-----PKHLWT 305 (402)
T ss_pred HHHHHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhc-----CCcHHH
Confidence 12233334456554332 333233 34678999999999999999988766666555554433322110 122333
Q ss_pred HHHHHHH----HHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhHHHHhhccchhhHHHHHHHHH
Q psy15864 335 PTVFLVL----AAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYYPMLDTFHLWGTLYFYAAISV 410 (553)
Q Consensus 335 ~~~~~~~----~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~~~~ 410 (553)
+++..++ .++..+... +....++.+.+|.+.+ ++...+..+++.+++.+.|.+.+..|+...+.+.+++++
T Consensus 306 ~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~~~~~~----~~~~~~~~l~~~~~~~~~G~l~~~~G~~~~f~~~~~~~~ 380 (402)
T PRK11902 306 MALAIGIENLCGGMGTAAFV-ALLMALCNRSFSATQY----ALLSALASVGRVYVGPTSGYLVEAYGWPGFYLMTVVIAL 380 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHH-HHHHHhcCCCCcHHHH----HHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHH
Confidence 3333322 222222222 3334677777775544 444445566666667788899999997766666665555
Q ss_pred HHHhhh
Q psy15864 411 VGTLYM 416 (553)
Q Consensus 411 ~~~~~~ 416 (553)
+..++.
T Consensus 381 ~~~~~~ 386 (402)
T PRK11902 381 PGLALL 386 (402)
T ss_pred HHHHHH
Confidence 554443
No 68
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.64 E-value=7.1e-15 Score=149.17 Aligned_cols=263 Identities=11% Similarity=0.025 Sum_probs=171.4
Q ss_pred cccccccc--cchhhhhhhhhccCcccccchhchhhhhHHHHHHHHHhhcccc----chHHHHHHHHHHHHHHHHHhccc
Q psy15864 91 TFLYKMAA--PLVLVLTYVAEITQPHLRGMLSATASMTTIFGTVSQLFLGSFL----HWRSAAILNLLFPILALCALYFI 164 (553)
Q Consensus 91 r~~~G~ga--~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~lG~~l~~~l~~~l----gWr~~f~i~~i~~li~~i~~~~l 164 (553)
|+++|.+. ..++..+++.++ .++|++..+....+.++|.++++++++.+ |||+.|++.++..++.++.. .+
T Consensus 101 ~~l~~~~~~~~~p~~~al~~~~--~~~~~~~~g~~~~~~slG~~~g~~l~g~l~~~~g~~~~f~~~~~~~~~~~~~~-~~ 177 (382)
T TIGR00902 101 IGLFALFFSAGMPIGDALANTW--QKQFGLDYGKVRLIGSAAFIIGSALFGGLIGMFDEQNILAILTAGLAFMLIGF-LI 177 (382)
T ss_pred HHHHHHHHccchhHHHHHHHHH--HHHcCCCccHHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHHHH-Hc
Confidence 44444432 244555665554 47789999999999999999999887765 99999988766533333333 33
Q ss_pred cCC-ceeeeecCChHHHHHHHHHHcCCCCCcchHHHHHHHHHHHHHHHHHhcCCCCCCChhhhhhhhhcchhHHHHHHHH
Q psy15864 165 PES-PHWLISQGRMQEASASLCWLRGWVTPDKVQTELSQITKAIEESELKRLGKDGQRRPNYRMYMRRTFLLPYAIVTSL 243 (553)
Q Consensus 165 pEs-p~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (553)
+++ ++. ++.++. . .........+++++..+... +
T Consensus 178 ~~~~~~~----~~~~~~------------~-------------------------~~~~~~~~~~l~~~~~~~~l----~ 212 (382)
T TIGR00902 178 KPTIPPK----DAIPED------------E-------------------------SQGDSAFIALLKNPMNLRFL----A 212 (382)
T ss_pred CCCCCCC----cccccc------------c-------------------------cccchhHHHHHcChHHHHHH----H
Confidence 333 210 000000 0 00001112222332222222 2
Q ss_pred HHHHhhhhhHHHHhhHHHHHHhhCCCCCh-HHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHHHHHHHHH
Q psy15864 244 FFIGQFGGMTTLQTYAVGIFESIHAPLDP-YFATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAACFIVVAVYAQ 322 (553)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~ 322 (553)
..+...........+.|.++++.|.+... .....+..++.+++.++++++.||+|.|+++.++.++..+.++++.+
T Consensus 213 ~~~l~~~~~~~~~~~~~~~l~~~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~~~~~~--- 289 (382)
T TIGR00902 213 AVCLIQGAHAAYYGFSAIYWQAAGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLISAIACVGRWAIIGA--- 289 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHHHHHHHHHh---
Confidence 22223333444555667777777776543 35555677888889999999999999999999998888888877765
Q ss_pred hhcccCCCCChhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHH-HHHHHHHHHHHHhHHHHhhccchhh
Q psy15864 323 FHLSYGWDSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGS-SSYIFAFAVNKLYYPMLDTFHLWGT 401 (553)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~-~~~~~~~i~~~~~~~~~~~~g~~~~ 401 (553)
.++.+.+++..++.++.++....+. ..|+.+. |++.|+++.++.+. ...++..+++.+.|.+.+..+. ..
T Consensus 290 ------~~~~~~~~~~q~l~g~~~~~~~~~~-~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~g~-~~ 360 (382)
T TIGR00902 290 ------IEAFPLIFLLQILHCGTFAVCHLAA-MRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPTLGA-GT 360 (382)
T ss_pred ------HhhHHHHHHHHHHHHHHHHHHHHHH-HHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-HH
Confidence 4566777778888888887777665 4888887 99999999998764 4668899999999999998874 55
Q ss_pred HHHHHHHHHHHH
Q psy15864 402 LYFYAAISVVGT 413 (553)
Q Consensus 402 ~~~~~~~~~~~~ 413 (553)
+++.+++.++..
T Consensus 361 ~~~~~~~~~~~~ 372 (382)
T TIGR00902 361 FVFMAIIAAAAF 372 (382)
T ss_pred HHHHHHHHHHHH
Confidence 655555555443
No 69
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.64 E-value=3.1e-15 Score=152.60 Aligned_cols=249 Identities=12% Similarity=0.036 Sum_probs=150.3
Q ss_pred cccccccccccc--hhhhhhhhhccCcccccchhchhhhhHHHHHHHHHhhcccc---chHHHHHHHHHHHHHHHHH-hc
Q psy15864 89 KGTFLYKMAAPL--VLVLTYVAEITQPHLRGMLSATASMTTIFGTVSQLFLGSFL---HWRSAAILNLLFPILALCA-LY 162 (553)
Q Consensus 89 ~gr~~~G~ga~~--~~~~~~i~e~~p~~~Rg~~~~~~~~~~~lG~~l~~~l~~~l---gWr~~f~i~~i~~li~~i~-~~ 162 (553)
-.|+++|++.+. +...+++.+++|+++|++++++...+..+|..+|+.+++.+ +||++|++.+++.++..++ .+
T Consensus 104 ~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~~~g~~~~f~~~~~~~~~~~i~~~~ 183 (400)
T PRK11646 104 LSCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLLQYDFRLVCATGAVLFVLAAAFNAW 183 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH
Confidence 357777876643 45668899999999999999999999999999998887766 9999999988777665433 34
Q ss_pred cccCCceeeeecCChHHHHHHHHHHcCCCCCcchHHHHHHHHHHHHHHHHHhcCCCCCCChhhhhhhhhcchhHHHHHHH
Q psy15864 163 FIPESPHWLISQGRMQEASASLCWLRGWVTPDKVQTELSQITKAIEESELKRLGKDGQRRPNYRMYMRRTFLLPYAIVTS 242 (553)
Q Consensus 163 ~lpEsp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (553)
++||.+. .+.. .+. . ..++..++.+......+..
T Consensus 184 ~~~~~~~-----~~~~---------------~~~-------~------------------~~~~~~~~~~~~~~~~~~~- 217 (400)
T PRK11646 184 LLPAYKL-----STVR---------------TPV-------R------------------EGMTRVLRDKRFVTYVLTL- 217 (400)
T ss_pred hCCcccc-----cccc---------------hhh-------H------------------HHHHHHHcCchHHHHHHHH-
Confidence 4565210 0000 000 0 0111122222111111111
Q ss_pred HHHHHhhhhhHHHHhhHHHHHHhhCCCC-ChHHHHHHHHHHHHHHHHHHhhhh-cccCCcceeecchhHHHHHHHHHHHH
Q psy15864 243 LFFIGQFGGMTTLQTYAVGIFESIHAPL-DPYFATLLLGVAELGGALLCVVLI-HYTGKRPLALISTGGSAACFIVVAVY 320 (553)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~i~~~~g~~~~g~l~-dr~Grr~~l~~~~~~~~i~~~~~~~~ 320 (553)
+..+........+.|.+.++.+.+. ...+...+.+++.+++....+++. ||++.++.+..++++.+++.+++..
T Consensus 218 ---~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~~- 293 (400)
T PRK11646 218 ---TGYYMLAVQVMLMLPIMVNDIAGSPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSMFPIGM- 293 (400)
T ss_pred ---HHHHHHHHHHHHhhhhhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHH-
Confidence 1111111223345666666544332 233444445555554444445555 4566555555665555555554443
Q ss_pred HHhhcccCCCCChhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhHHHHhhc
Q psy15864 321 AQFHLSYGWDSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYYPMLDTF 396 (553)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 396 (553)
.++.+.+++..++++.+.+... +...+++.+.+|++.||++.|+.+....+++.++|.+.|.+.+..
T Consensus 294 --------~~~~~~~~~~~~l~~~g~~~~~-p~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~ig~~l~G~l~~~~ 360 (400)
T PRK11646 294 --------VSNLQQLFTLICLFYIGSIIAE-PARETLSASLADARARGSYMGFSRLGLALGGAIGYIGGGWLFDLG 360 (400)
T ss_pred --------hhhHHHHHHHHHHHHHHHHHHH-ccHHHHHHhcCCcccchhhhhHHHHHHHHHHHhcccchHHHHHHH
Confidence 3334444444445555444333 333478889999999999999999999999999999999998764
No 70
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.63 E-value=2.6e-16 Score=157.72 Aligned_cols=252 Identities=20% Similarity=0.223 Sum_probs=161.7
Q ss_pred ccccccccc--cchhhhhhhhhccCcccccchhchhhhhHHHHHHHHHhhcccc----chHHHHHHHHHHHHHHHHH-hc
Q psy15864 90 GTFLYKMAA--PLVLVLTYVAEITQPHLRGMLSATASMTTIFGTVSQLFLGSFL----HWRSAAILNLLFPILALCA-LY 162 (553)
Q Consensus 90 gr~~~G~ga--~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~lG~~l~~~l~~~l----gWr~~f~i~~i~~li~~i~-~~ 162 (553)
.|++.|++. ..+...+++.|++|+++|++++++...+..+|.++++.+++.+ +||++|++.+++.++.+++ .+
T Consensus 91 ~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~il~~~ 170 (352)
T PF07690_consen 91 ARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYFGWRWAFLISAILSLIAAILFIL 170 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCHHCCHHHHHHHHHHHHHHHHHC
T ss_pred hccccccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhccccccccccccchhhhhhhhHhh
Confidence 577888875 3557779999999999999999999999999999999888766 8999999999999888664 34
Q ss_pred cccCCceeeeecCChHHHHHHHHHHcCCCCCcchHHHHHHHHHHHHHHHHHhcCCCCCCChhhhhhhhhcchhHHHHHHH
Q psy15864 163 FIPESPHWLISQGRMQEASASLCWLRGWVTPDKVQTELSQITKAIEESELKRLGKDGQRRPNYRMYMRRTFLLPYAIVTS 242 (553)
Q Consensus 163 ~lpEsp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (553)
++++++.....+.+.++ . .... ......++.+++++..+..++.
T Consensus 171 ~~~~~~~~~~~~~~~~~----------------~-----------~~~~-------~~~~~~~~~~~~~~~~~~~~~~-- 214 (352)
T PF07690_consen 171 FLPEPPPPRERESPKES----------------E-----------SKKP-------KPLKPGFKSLFKNPVLWILLIA-- 214 (352)
T ss_dssp CC---STTTT--SSTTT----------------T-------------HH-------HCCCH-CTHHHHHHCCHHHHHH--
T ss_pred hhhhccccccccccccc----------------c-----------cccc-------cccccccccccccchhhhhhhh--
Confidence 45444321100000000 0 0000 0000113334444433212222
Q ss_pred HHHHHhhhhhHHHHhhHHHH-HHhhCCC--CChHHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHHHHHH
Q psy15864 243 LFFIGQFGGMTTLQTYAVGI-FESIHAP--LDPYFATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAACFIVVAV 319 (553)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~-~~~~g~~--~~~~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~ 319 (553)
.+...........+.|.+ .+..+.+ .+......+..++.+++.++.|+++||+++++.+.+......++.+.+.+
T Consensus 215 --~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (352)
T PF07690_consen 215 --FFLFFFVFSGFSFFLPLYLQEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRFGRRRRLLIAILLLILGALGLLL 292 (352)
T ss_dssp --HHHHHHHHHHHHHHHHHHCCHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCC
T ss_pred --hhHHHHHHHHhhcccchhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHH
Confidence 222222334456666765 4455655 22335566777888888999999999999987777666666555555443
Q ss_pred HHHhhcccCCCCChhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHHHHH
Q psy15864 320 YAQFHLSYGWDSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVN 386 (553)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~ 386 (553)
... ..+....++..++.+++.+... +...+++.+.+|++.||++.|+.+.+..+++.++|
T Consensus 293 ~~~------~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 293 LPF------SSSPVWLIIALFLIGFGFGIVF-PILFSLIQELVPPEYRGTAFGLFNSIGSLGGIIGP 352 (352)
T ss_dssp SHH------HCHHHHHHHHHHHHHHHHHHHC-HHHHHHHHCCCHTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHH------hhhHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 221 2233444555666677665554 44458999999999999999999999999998886
No 71
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.62 E-value=6.1e-15 Score=148.31 Aligned_cols=234 Identities=12% Similarity=0.033 Sum_probs=143.0
Q ss_pred hhhhhhhccCcccccchhchhhhhHHHHHHHHHhhcccc----c--------hHHHHHHHHHHHHHHHHHhcc-ccCCce
Q psy15864 103 VLTYVAEITQPHLRGMLSATASMTTIFGTVSQLFLGSFL----H--------WRSAAILNLLFPILALCALYF-IPESPH 169 (553)
Q Consensus 103 ~~~~i~e~~p~~~Rg~~~~~~~~~~~lG~~l~~~l~~~l----g--------Wr~~f~i~~i~~li~~i~~~~-lpEsp~ 169 (553)
..+++.|++|+++|+++.++..++..+|.++++.++..+ + ||++|++.+++.++.++..++ .||+.+
T Consensus 104 ~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~wr~~f~i~ai~~l~~~~~~~~~~~e~~~ 183 (356)
T TIGR00901 104 LDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITLWGYIFFWTALLILPGLLVTLFLAKEPQE 183 (356)
T ss_pred HHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHHhccCCCc
Confidence 347899999999999999999999999999988887544 6 999999999888777665554 577532
Q ss_pred eeeecCChHHHHHHHHHHcCCCCCcchHHHHHHHHHHHHHHHHHhcCCCCCCChhhhhhhhhcchhHHHHHHHHHHHHhh
Q psy15864 170 WLISQGRMQEASASLCWLRGWVTPDKVQTELSQITKAIEESELKRLGKDGQRRPNYRMYMRRTFLLPYAIVTSLFFIGQF 249 (553)
Q Consensus 170 ~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (553)
.. ...++ ...... ..++.+++++..++.+..... .+...
T Consensus 184 ~~---~~~~~-------------------~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~-~~~~~ 222 (356)
T TIGR00901 184 DA---SVPKP-------------------LTQAVL------------------KPIREFFQRKNMIQALLLLLL-IVLYK 222 (356)
T ss_pred cc---ccchh-------------------HHHHHH------------------HHHHHHHHhcCchHHHHHHHH-HHHHH
Confidence 10 00000 000000 112222333221122222222 22223
Q ss_pred hhhHHHHhhHHHHHHhhCCCCChH-HHHHHHH-HHHHHHHHHHhhhhcccCCcceeecchhHHHHHHHHHHHHHHhhcc-
Q psy15864 250 GGMTTLQTYAVGIFESIHAPLDPY-FATLLLG-VAELGGALLCVVLIHYTGKRPLALISTGGSAACFIVVAVYAQFHLS- 326 (553)
Q Consensus 250 ~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~-i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~- 326 (553)
........+.|.++.+.|++.... ....+.+ ++.++|.+++|+++||+|||+.+++++++.+++..++.+.......
T Consensus 223 ~~~~~~~~~~~~~l~~~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 302 (356)
T TIGR00901 223 LGDSAATVLTTLFLLDMGFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNILYALLLFGIVQALTNAGFVWLASNGHHD 302 (356)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCccc
Confidence 334445556666666666654332 3333333 5678999999999999999988887777766665544432210000
Q ss_pred -cCCCCChhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHH
Q psy15864 327 -YGWDSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSS 378 (553)
Q Consensus 327 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~ 378 (553)
....+.+.++...++.+++.+....+. .+++.|.+|++.||+.+|+.+.+.
T Consensus 303 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~p~~~~g~~~g~~~~~~ 354 (356)
T TIGR00901 303 GITFPHLLMLFLTITLEAVTGGLGTVAF-VAFLSKLSNPKFGATQMALLSSLS 354 (356)
T ss_pred ccccchHHHHHHHHHHHHHHhHHHHHHH-HHHHHHhcCCCccHHHHHHHHHHH
Confidence 000223444555555566666565555 499999999999999999877654
No 72
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.61 E-value=1.1e-14 Score=147.61 Aligned_cols=247 Identities=17% Similarity=0.121 Sum_probs=141.6
Q ss_pred cccccccccccc--hhhhhhhhhccCcccccchhchhhhhHHHHHHHHHhhcccc----chHHHHHHHHHHHHHHHH-Hh
Q psy15864 89 KGTFLYKMAAPL--VLVLTYVAEITQPHLRGMLSATASMTTIFGTVSQLFLGSFL----HWRSAAILNLLFPILALC-AL 161 (553)
Q Consensus 89 ~gr~~~G~ga~~--~~~~~~i~e~~p~~~Rg~~~~~~~~~~~lG~~l~~~l~~~l----gWr~~f~i~~i~~li~~i-~~ 161 (553)
-.|+++|++.+. +...+++.|++|+++|++++++...+..+|.+++++++..+ +||++|++.++++++..+ ..
T Consensus 84 ~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (377)
T PRK11102 84 YMRFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFSWHAIFWVLALAAILAAALVF 163 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHH
Confidence 457778877653 45668899999999999999999999999999998887655 999999998888777644 44
Q ss_pred ccccCCceeeeecCChHHHHHHHHHHcCCCCCcchHHHHHHHHHHHHHHHHHhcCCCCCCChhhhhhhhhcchhHHHHHH
Q psy15864 162 YFIPESPHWLISQGRMQEASASLCWLRGWVTPDKVQTELSQITKAIEESELKRLGKDGQRRPNYRMYMRRTFLLPYAIVT 241 (553)
Q Consensus 162 ~~lpEsp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (553)
+++||+++-. .+. ........ ..+...++.+.. +..
T Consensus 164 ~~~~~~~~~~---~~~---------------~~~~~~~~----------------------~~~~~~~~~~~~----~~~ 199 (377)
T PRK11102 164 FFIPETLPKE---RRQ---------------PFHLRTTI----------------------RNFASLFRHKRV----LGY 199 (377)
T ss_pred HhCCccCccc---ccC---------------CCChHHHH----------------------HHHHHHHcChHH----HHH
Confidence 5577764210 000 00000000 011111212111 111
Q ss_pred HHHHHHhhhhhHHHHhhHHHHH-HhhCCCCC-hHHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHHHHHH
Q psy15864 242 SLFFIGQFGGMTTLQTYAVGIF-ESIHAPLD-PYFATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAACFIVVAV 319 (553)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~-~~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~ 319 (553)
.+..+..+.+......+.|.++ +..+.+.. ..+...+..++.+++.++++++.||+|||+.+.++.++..+..+.+..
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~ 279 (377)
T PRK11102 200 MLASGFSFAGMFSFLTAGPFVYIELNGVSPQNFGYYFALNIVFLFVMTIINSRFVRRVGALNMLRFGLWIQFIMGIWLVV 279 (377)
T ss_pred HHHHHHHHHHHHHHHHcCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHH
Confidence 1112222223333334444444 33465433 345666777889999999999999999999888777655444333322
Q ss_pred HHHhhcccCCCCChhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHH-HHHHHHH
Q psy15864 320 YAQFHLSYGWDSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSY-IFAFAVN 386 (553)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~-~~~~i~~ 386 (553)
.... ....+...+...+.+.+.+..... ...++.|..| +.++++.++.+.... +++.+++
T Consensus 280 ~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~~~g~ 340 (377)
T PRK11102 280 SALL-----DLGFWALVVGVAAFVGCVSMISSN-AMAVILDEFP-HMAGTASSLAGTLRFGIGAIVGA 340 (377)
T ss_pred HHHH-----hhhHHHHHHHHHHHHHHHHHhhHH-HHHHHhcccc-ccchHHHHHHHHHHHHHHHHHHH
Confidence 2110 112233333333333323222222 2355667766 788999988776654 3334444
No 73
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.61 E-value=1.9e-14 Score=147.54 Aligned_cols=165 Identities=12% Similarity=0.047 Sum_probs=114.7
Q ss_pred HhhHHHHHHhhCCCC---------ChHHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHHHHHHHHHhhcc
Q psy15864 256 QTYAVGIFESIHAPL---------DPYFATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAACFIVVAVYAQFHLS 326 (553)
Q Consensus 256 ~~~~~~~~~~~g~~~---------~~~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~ 326 (553)
..+.+.++++.+.+. .......+..++.+++.++.|+++||+|||+++.++.++.+++++++.....
T Consensus 228 ~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~~~~---- 303 (418)
T TIGR00889 228 NIFGNGFLHEFGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAYGDP---- 303 (418)
T ss_pred HHhHHHHHHHhcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCc----
Confidence 345555555555332 2245556667788889999999999999999998888877777655544100
Q ss_pred cCCCCChhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHH-HHHHHHHHHHHHHhHHHHhhcc------ch
Q psy15864 327 YGWDSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASG-SSSYIFAFAVNKLYYPMLDTFH------LW 399 (553)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~-~~~~~~~~i~~~~~~~~~~~~g------~~ 399 (553)
.....+.+++..++.+++.+...... ..+++|.+|++.|+++.|+.+ ....++++++|.+.|.+.+..+ |.
T Consensus 304 -~~~~~~~l~l~~~l~g~~~~~~~~~~-~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~ 381 (418)
T TIGR00889 304 -EYFGYALLFLSMIVYGCAFDFFNISG-SVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQ 381 (418)
T ss_pred -chhhHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchH
Confidence 00012334455666666655444333 478899999999999999997 5577899999999999988743 44
Q ss_pred hhHHHHHHHHHHHHhhheEEcccCCCC
Q psy15864 400 GTLYFYAAISVVGTLYMYFVMPETEGR 426 (553)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~~~pet~~~ 426 (553)
..+.+.+++.++.+++.++++||+.+.
T Consensus 382 ~~f~~~~~~~~i~~~l~~~~~~~~~~~ 408 (418)
T TIGR00889 382 TMWLFFAGYIAILAVLFMIFFKYSHNA 408 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCcccC
Confidence 556666677777777777888887543
No 74
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.61 E-value=1.3e-14 Score=148.06 Aligned_cols=250 Identities=17% Similarity=0.128 Sum_probs=143.4
Q ss_pred ccccccccccc--chhhhhhhhhccCcccccchhchhhhhHHHHHHHHHhhcccc----chHHHHHHHHHHHHHHHHH-h
Q psy15864 89 KGTFLYKMAAP--LVLVLTYVAEITQPHLRGMLSATASMTTIFGTVSQLFLGSFL----HWRSAAILNLLFPILALCA-L 161 (553)
Q Consensus 89 ~gr~~~G~ga~--~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~lG~~l~~~l~~~l----gWr~~f~i~~i~~li~~i~-~ 161 (553)
-.|+++|++.. .+...+++.|++|+++|+++.++......+|.+++++++..+ +||+.|++.+++++++.++ .
T Consensus 96 ~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~g~~~~~~~~~~~~~i~~~~~~ 175 (392)
T PRK10473 96 AGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKFPWQSLFYTMAAMGILVLLLSL 175 (392)
T ss_pred HHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHHHHHHHHHHHHHHHHHH
Confidence 46788888765 346778999999999999999999998888888888776654 8999999998887776544 4
Q ss_pred ccccCCceeeeecCChHHHHHHHHHHcCCCCCcchHHHHHHHHHHHHHHHHHhcCCCCCCChhhhhhhhhcchhHHHHHH
Q psy15864 162 YFIPESPHWLISQGRMQEASASLCWLRGWVTPDKVQTELSQITKAIEESELKRLGKDGQRRPNYRMYMRRTFLLPYAIVT 241 (553)
Q Consensus 162 ~~lpEsp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (553)
+++||++... +.+. ... .+ .....+.++.+....+ ..
T Consensus 176 ~~~~~~~~~~--~~~~----------------~~~---~~---------------------~~~~~~~~~~~~~~~~-~~ 212 (392)
T PRK10473 176 FILKETRPAR--APAA----------------SSK---PR---------------------ENSESLLNRFFLSRLV-IT 212 (392)
T ss_pred HHcCCCCCcc--cCCc----------------cch---HH---------------------HHHHHHhCHHHHHHHH-HH
Confidence 4577764210 0000 000 00 0001111111111111 11
Q ss_pred HHHHHHhhhhhHHHHhhHHHHH-HhhCCCCCh-HHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHHHHHH
Q psy15864 242 SLFFIGQFGGMTTLQTYAVGIF-ESIHAPLDP-YFATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAACFIVVAV 319 (553)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~-~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~ 319 (553)
.+... ....+..+.|.++ ...|++... .......+++.+++.++.+++.||+|||+.+.+++++..++.+++.+
T Consensus 213 ~~~~~----~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~ 288 (392)
T PRK10473 213 TLSVT----VILTFVNTSPVLLMEQMGFSRGEYAIIMALTAGVSMTVSFSTPFALGIFKPRTLMLTSQVLFLAAGITLAL 288 (392)
T ss_pred HHHHH----HHHHHHHhCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH
Confidence 11111 1112223334443 344655433 34556678888999999999999999999888887777766666554
Q ss_pred HHHhhcccCCCCChhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhHHHHhhccch
Q psy15864 320 YAQFHLSYGWDSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYYPMLDTFHLW 399 (553)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~~~g~~ 399 (553)
.. ..+..++...+.+.+.+.++.. .+..++.|.+.|+ +.......++..+++.+.+.+.+..++.
T Consensus 289 ~~---------~~~~~~~~~~l~~~g~~~~~~~---~~~~~~~~~~~~~---g~~~~~~~~~~~~g~~~~~~l~~~~g~~ 353 (392)
T PRK10473 289 SP---------SHAVSLFGITLICAGFSVGFGV---AMSQALGPFSLRA---GVASSTLGIAQVCGSSLWIWLAAVLGIS 353 (392)
T ss_pred HH---------HHHHHHHHHHHHHHHHHHHhHH---HHHHHhccCcccc---cHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 22 1222233333333333333221 2334455554443 3333444556666677777777666644
Q ss_pred h
Q psy15864 400 G 400 (553)
Q Consensus 400 ~ 400 (553)
.
T Consensus 354 ~ 354 (392)
T PRK10473 354 A 354 (392)
T ss_pred h
Confidence 3
No 75
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.60 E-value=9.1e-15 Score=156.91 Aligned_cols=191 Identities=12% Similarity=0.047 Sum_probs=139.3
Q ss_pred HHHHHHHHHHhhhhhHHHHhhHHHHHHhhCCCCC-hHHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHHH
Q psy15864 238 AIVTSLFFIGQFGGMTTLQTYAVGIFESIHAPLD-PYFATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAACFIV 316 (553)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~ 316 (553)
++++++..+........+...+|.+....+.+.. ..+..++..++.++|++++|+++||+|||+++++++++.+++.++
T Consensus 169 ~~i~~l~~~~~g~d~~~is~ilp~i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR~~lii~lil~~i~~ll 248 (742)
T TIGR01299 169 FFVLGLALMADGVEVFVVGFVLPSAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQCLLICLSVNGFFAFF 248 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHH
Confidence 3333333333333344556667777677776543 346777888999999999999999999999999988888887777
Q ss_pred HHHHHHhhcccCCCCChhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhHHHHhhc
Q psy15864 317 VAVYAQFHLSYGWDSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYYPMLDTF 396 (553)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 396 (553)
.++ ..+.+.+++++++.|++.+... ++.+++++|++|++.||..+++...+..+|+++++.+...+....
T Consensus 249 ~af---------a~s~~~llv~R~l~G~g~g~~~-p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~il~~~ 318 (742)
T TIGR01299 249 SSF---------VQGYGFFLFCRLLSGFGIGGAI-PIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAIIPHY 318 (742)
T ss_pred HHH---------HhhHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 665 4567788888999999887766 455699999999999999999999988898888887766555433
Q ss_pred c------------chhhHHHHHHHHHHHHhhheEEcccC------CCCChHHHHHHHhcc
Q psy15864 397 H------------LWGTLYFYAAISVVGTLYMYFVMPET------EGRTLRDIEEHFADK 438 (553)
Q Consensus 397 g------------~~~~~~~~~~~~~~~~~~~~~~~pet------~~~~~~~~~~~~~~~ 438 (553)
+ .|+.++++++++.+++++.++++||+ +++..++.+.+.+..
T Consensus 319 G~~~~~g~~~~~~gWR~l~~i~~lp~ll~ll~~~~lPESPrwL~~~gr~~eA~~iL~~i~ 378 (742)
T TIGR01299 319 GWSFQMGSAYQFHSWRVFVIVCAFPCVFAIGALTFMPESPRFFLENGKHDEAWMILKLIH 378 (742)
T ss_pred cchhccccccccccHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHCCCHHHHHHHHHHHh
Confidence 2 24555566666666667777889998 455555555554443
No 76
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.60 E-value=7e-15 Score=152.25 Aligned_cols=241 Identities=15% Similarity=0.108 Sum_probs=143.3
Q ss_pred hhhhhcc-CcccccchhchhhhhHHHHHHHHHhhcc-----------ccchHHHHHHHHHHHHHHHHHh-ccccCCceee
Q psy15864 105 TYVAEIT-QPHLRGMLSATASMTTIFGTVSQLFLGS-----------FLHWRSAAILNLLFPILALCAL-YFIPESPHWL 171 (553)
Q Consensus 105 ~~i~e~~-p~~~Rg~~~~~~~~~~~lG~~l~~~l~~-----------~lgWr~~f~i~~i~~li~~i~~-~~lpEsp~~l 171 (553)
++..|++ ++++|++..++...+..+|.++++.+.. ..+||+++++.+++++++.++. ++++|.+...
T Consensus 122 al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~e~~~~~ 201 (437)
T TIGR00792 122 SLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGGDDKFGWFMFALVLALIGVVSLIICFFGTKERYSEI 201 (437)
T ss_pred hCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccHHHHHHHHHHHHHHHHHHHHcCCEecCCCC
Confidence 5567877 4689999999988887777665443321 2389999999998887775544 5577764210
Q ss_pred eecCChHHHHHHHHHHcCCCCCcchHHHHHHHHHHHHHHHHHhcCCCCCCChhhhhhhhhcchhHHHHHHHHHHHHhhhh
Q psy15864 172 ISQGRMQEASASLCWLRGWVTPDKVQTELSQITKAIEESELKRLGKDGQRRPNYRMYMRRTFLLPYAIVTSLFFIGQFGG 251 (553)
Q Consensus 172 ~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (553)
. ..++ .... ....++.+++++..+..++..++. ...
T Consensus 202 ~---~~~~------------~~~~-------------------------~~~~~~~l~~~~~~~~~~~~~~~~----~~~ 237 (437)
T TIGR00792 202 P---KNIE------------KKLS-------------------------LKQIFKALFKNDQLLILCLAYLFY----NLA 237 (437)
T ss_pred C---cccc------------cCCC-------------------------HHHHHHHHhCCHHHHHHHHHHHHH----HHH
Confidence 0 0000 0000 001122222222222222222222 222
Q ss_pred hHHHHhhHHHHHHh-hCCCCChHHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHHHHHHHHHhhcccCCC
Q psy15864 252 MTTLQTYAVGIFES-IHAPLDPYFATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAACFIVVAVYAQFHLSYGWD 330 (553)
Q Consensus 252 ~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~ 330 (553)
......+.+.+.+. .+.+....+...+..++.+++.++.++++||+|+|+++.++.++.+++.+++.+. ..
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~--------~~ 309 (437)
T TIGR00792 238 FNIKNGVQVYYFTYVLGDPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYLIFFFA--------GS 309 (437)
T ss_pred HHHHcchhheeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHc--------ch
Confidence 22222222332221 1212223345556678899999999999999999999888877777666555431 12
Q ss_pred CChhHHHHHHHHHHHHhhhhccccceeeccccc-------cchhhhhhhHHHHHHHHHHHHHHHHhHHHHhhccc
Q psy15864 331 SPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFP-------NNIRATASGASGSSSYIFAFAVNKLYYPMLDTFHL 398 (553)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p-------~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~~~g~ 398 (553)
+.+..++..++.+++.+... +..+++++|+.+ ++.+|+..|+.+++..+++.+++.+.+.+.+..|+
T Consensus 310 ~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~~~G~ 383 (437)
T TIGR00792 310 NLPLILVLIILAGFGQNFVT-GLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLILGIIGY 383 (437)
T ss_pred hHHHHHHHHHHHHHHHHHHH-HHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 33444445555555554443 444577788765 45679999999999999999999999998876554
No 77
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.60 E-value=4e-14 Score=143.76 Aligned_cols=262 Identities=11% Similarity=0.021 Sum_probs=158.3
Q ss_pred ccccccccc--cchhhhhhhhhccCcccccchhchhhhhHHHHHHHHHhhcccc----chHHHHHHHHHHHHHHHHHhcc
Q psy15864 90 GTFLYKMAA--PLVLVLTYVAEITQPHLRGMLSATASMTTIFGTVSQLFLGSFL----HWRSAAILNLLFPILALCALYF 163 (553)
Q Consensus 90 gr~~~G~ga--~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~lG~~l~~~l~~~l----gWr~~f~i~~i~~li~~i~~~~ 163 (553)
.|+++|++. ..+.+.+++.++ .++|++..+...++..+|.+++|++++.+ |||.+|++.++..++.++..++
T Consensus 100 ~~~l~g~~~~~~~~~~~a~~~~~--~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~~g~~~~f~~~~~~~~~~~~~~~~ 177 (382)
T PRK11128 100 AIGLFNLFFSPLVPLTDALANTW--QKQIGLDYGKVRLWGSIAFVIGSALTGKLVSWFGEQAILWILTAGVASMLLGQLL 177 (382)
T ss_pred HHHHHHHHHcccccHHHHHHHHH--HhhccCCcchHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHc
Confidence 456666533 344555666666 35688888888888888888888888765 9999999887655555444444
Q ss_pred ccCCceeeeecCChHHHHHHHHHHcCCCCCcchHHHHHHHHHHHHHHHHHhcCCCCCCChhhhhhhhhcchhHHHHHHHH
Q psy15864 164 IPESPHWLISQGRMQEASASLCWLRGWVTPDKVQTELSQITKAIEESELKRLGKDGQRRPNYRMYMRRTFLLPYAIVTSL 243 (553)
Q Consensus 164 lpEsp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (553)
.||.++. .+.++. .......+..+++++..+..++..++
T Consensus 178 ~~~~~~~----~~~~~~-------------------------------------~~~~~~~~~~i~~~~~~~~~~~~~~l 216 (382)
T PRK11128 178 RPTIMPQ----GESRQQ-------------------------------------ESAGWPAWKALLKEPTVWRFLLCVSL 216 (382)
T ss_pred cCCCCCc----cccccc-------------------------------------cccccchHHHHHcChhHHHHHHHHHH
Confidence 5554210 000000 00000122333333333222222222
Q ss_pred HHHHhhhhhHHHHhhHHHHHHhhCCCCCh-HHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHHHHHHHHH
Q psy15864 244 FFIGQFGGMTTLQTYAVGIFESIHAPLDP-YFATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAACFIVVAVYAQ 322 (553)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~ 322 (553)
.. ........+.+.+..+.|.+... .....+..++.+++.++.+++.||+|+|+.+.+++++.+++.+++..
T Consensus 217 ~~----~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~~~~~~~~--- 289 (382)
T PRK11128 217 LQ----GSHAAYYGFSAIYWQAAGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLLSAICGVVRWGLMGS--- 289 (382)
T ss_pred HH----HHhHhHHHHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHh---
Confidence 22 22223334455555666665433 34445566778888899999999999999988887777776655543
Q ss_pred hhcccCCCCChhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHH-HHHHHHHHHHHhHHHHhhccchhh
Q psy15864 323 FHLSYGWDSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSS-SYIFAFAVNKLYYPMLDTFHLWGT 401 (553)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~-~~~~~~i~~~~~~~~~~~~g~~~~ 401 (553)
.++.+.+++..++.+++.+...... ..++.+. ++..+++..++.+.. ..++..++|.+.|.+.+..+. ..
T Consensus 290 ------~~~~~~~~~~~~l~g~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~g~-~~ 360 (382)
T PRK11128 290 ------TTALPWLIVIQILHCGTFTVCHLAA-MRYIAAR-PGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQHLGA-GV 360 (382)
T ss_pred ------hhhHHHHHHHHHHHHHHHHHHHHHH-HHHHHHC-CHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-HH
Confidence 4456666677777777766554444 3666776 455568888877644 456668999999999998875 34
Q ss_pred HHHHHHHHH
Q psy15864 402 LYFYAAISV 410 (553)
Q Consensus 402 ~~~~~~~~~ 410 (553)
++..+++.+
T Consensus 361 ~~~~~~~~~ 369 (382)
T PRK11128 361 FWVMALVAL 369 (382)
T ss_pred HHHHHHHHH
Confidence 444444433
No 78
>KOG1330|consensus
Probab=99.59 E-value=1.1e-15 Score=148.86 Aligned_cols=268 Identities=12% Similarity=0.016 Sum_probs=150.2
Q ss_pred cccccccccc--chhhhhhhhhccCcccccchhchhhhhHHHHHHHHHhhcccc-----chHHHHHHHHHHHHHHHHHh-
Q psy15864 90 GTFLYKMAAP--LVLVLTYVAEITQPHLRGMLSATASMTTIFGTVSQLFLGSFL-----HWRSAAILNLLFPILALCAL- 161 (553)
Q Consensus 90 gr~~~G~ga~--~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~lG~~l~~~l~~~l-----gWr~~f~i~~i~~li~~i~~- 161 (553)
.|-+.|+|-+ .++++++++|.+|..+|++++++++++..+|..+|.+++..+ .|||.|++.+++++++.++.
T Consensus 127 ~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~~Wr~af~~~avl~vi~~~L~~ 206 (493)
T KOG1330|consen 127 CRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTFWWRWAFRGSAVLGVIVGLLVF 206 (493)
T ss_pred HHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCccceEEEEEeehHHHHHHHHHHH
Confidence 3556677643 568889999999999999999999999999999999888876 49999999999999886555
Q ss_pred ccccCCceeeeecCChHHHHHHHHHHcCCCCCcchHHHHHHHHHHHHHHHHHhcCCCCCCChhhhh---hhh-hcchhHH
Q psy15864 162 YFIPESPHWLISQGRMQEASASLCWLRGWVTPDKVQTELSQITKAIEESELKRLGKDGQRRPNYRM---YMR-RTFLLPY 237 (553)
Q Consensus 162 ~~lpEsp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~ 237 (553)
++++|++|= ..++.. +.+. ........+++ +.+ +.+..+.
T Consensus 207 ~f~~eP~rg-----a~~~~~-------~~~~------------------------~~~~~ts~~kDl~~l~~~~v~v~~s 250 (493)
T KOG1330|consen 207 LFVREPERG-----ARDEVD-------GENK------------------------MVKPFTSVWKDLKVLAKIKVFVLSS 250 (493)
T ss_pred hhccCcccc-----cccccc-------cCCc------------------------CCCCccchHHHHHHHHccCceeeeh
Confidence 557776531 101000 0000 00001112222 222 1111111
Q ss_pred HHHHHHHHHHhhhhhHHHHhhHHHHHHhhCCCCCh-HHHHHHHHHHHHHHHHHHhhhhcccCCc----ceeecchhHHHH
Q psy15864 238 AIVTSLFFIGQFGGMTTLQTYAVGIFESIHAPLDP-YFATLLLGVAELGGALLCVVLIHYTGKR----PLALISTGGSAA 312 (553)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~i~~~~g~~~~g~l~dr~Grr----~~l~~~~~~~~i 312 (553)
+......+...+..++.+.+.+..+...+.+.+. .+...+..+++.+|.+++|.++|++-|+ ....+.-+..+.
T Consensus 251 -l~~~a~~fv~Gs~sww~p~~~~~~~~~~~~~~~~~~ifg~vt~~~G~lGvl~Ggiisd~~~~~~~~~~~~~~~q~~~~~ 329 (493)
T KOG1330|consen 251 -LGIIAAQFVIGSLSWWAPAFIYYSYELIGFDHNATLIFGGVTCAGGSLGVLFGGIISDKLSRIFPNSGTLRASQLSAAL 329 (493)
T ss_pred -HHHHHHHHhccccchhhhhHHHHHHHHhCCccccchhhhhHHHhhchhhheehHHHHHHHHHhcccccchhHHHHHHhh
Confidence 2222222222222333334444444445544443 4666778889999999999999995432 222222222221
Q ss_pred HHHHHHHHHHhhcccCCCCChhHHHHHHHHHHH-HhhhhccccceeeccccccchhhhhhhHHHHHHHHHH-HHHHHHhH
Q psy15864 313 CFIVVAVYAQFHLSYGWDSPLVPTVFLVLAAFL-THICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFA-FAVNKLYY 390 (553)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~-~i~~~~~~ 390 (553)
+..+...+..........+.+..++ +++++.. ....+.+. .-...|+.|++.|.++.++...+..+.+ +-+|++.|
T Consensus 330 g~~~s~~~L~~~~~~~~~s~~~~~i-l~~~g~~~~~~~~a~n-~~i~l~vV~p~~Rt~a~a~~~~~~h~fgd~~~p~ivG 407 (493)
T KOG1330|consen 330 GAPLSIPFLFLFPAFTSSSMIFGLI-LFLVGETISWFNWATN-NPIFLEVVPPSRRTTAYALDTVFEHIFGDAASPYIVG 407 (493)
T ss_pred hhhHHHHHHHHHHhhhhHHHHHHHH-HHHHHHHHHhcccccc-cceeeEecCcccccHHHHHHHHHHHHhccCCCcceeh
Confidence 1111111110000001222222222 3333333 22333333 3566899999999999999887766555 44555888
Q ss_pred HHHhhc
Q psy15864 391 PMLDTF 396 (553)
Q Consensus 391 ~~~~~~ 396 (553)
.+.+..
T Consensus 408 ilsd~l 413 (493)
T KOG1330|consen 408 ILSDKL 413 (493)
T ss_pred hHHHHh
Confidence 887664
No 79
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.59 E-value=1.9e-14 Score=144.67 Aligned_cols=249 Identities=19% Similarity=0.122 Sum_probs=150.6
Q ss_pred ccccccccccc--hhhhhhhhhccCcccccchhchhhhhHHHHHHHHHhhcccc------chHHHHHHHHHHHHHHHHHh
Q psy15864 90 GTFLYKMAAPL--VLVLTYVAEITQPHLRGMLSATASMTTIFGTVSQLFLGSFL------HWRSAAILNLLFPILALCAL 161 (553)
Q Consensus 90 gr~~~G~ga~~--~~~~~~i~e~~p~~~Rg~~~~~~~~~~~lG~~l~~~l~~~l------gWr~~f~i~~i~~li~~i~~ 161 (553)
.|+++|++.+. +..+.++.+++| ++|+++++++..+..+|..+++.++..+ +||+.|.+.+++.++.++
T Consensus 93 ~~~~~g~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~~w~~~f~~~~~~~~~~~~-- 169 (355)
T TIGR00896 93 GTALIGVGIAIINVLLPSLIKRDFP-QRVGLMTGLYSMALMGGAALAAAATVPLAQHSGGHWQQALAWWALPALLALL-- 169 (355)
T ss_pred HHHHHHHHHHHHhccchHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHH--
Confidence 46777776543 355677888886 6899999999999999988887776544 399999877665544332
Q ss_pred ccccCCceeeeecCChHHHHHHHHHHcCCCCCcchHHHHHHHHHHHHHHHHHhcCCCCCCChhhhhhhhhcchhHHHHHH
Q psy15864 162 YFIPESPHWLISQGRMQEASASLCWLRGWVTPDKVQTELSQITKAIEESELKRLGKDGQRRPNYRMYMRRTFLLPYAIVT 241 (553)
Q Consensus 162 ~~lpEsp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (553)
.++|+.++. .+.+ .. .........++++.. +..
T Consensus 170 ~~~~~~~~~----~~~~-------------~~--------------------------~~~~~~~~~~~~~~~----~~~ 202 (355)
T TIGR00896 170 AWIPQVRRR----VAAN-------------QT--------------------------TTRLTPVRIWRSPLA----WQV 202 (355)
T ss_pred HHhhhhccc----cCCC-------------CC--------------------------CCCCCCchhhcCHhH----HHH
Confidence 234443210 0000 00 000011112222211 112
Q ss_pred HHHHHHhhhhhHHHHhhHHHHHHhhCCCCC-hHHHHHHHHHHHHHHHHHHhhhhcccC-CcceeecchhHHHHHHHHHHH
Q psy15864 242 SLFFIGQFGGMTTLQTYAVGIFESIHAPLD-PYFATLLLGVAELGGALLCVVLIHYTG-KRPLALISTGGSAACFIVVAV 319 (553)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~i~~~~g~~~~g~l~dr~G-rr~~l~~~~~~~~i~~~~~~~ 319 (553)
.+..+.....+.....|+|.++++.+.+.. .....++..++.++++++.|+++||++ ||..+.++.++.+++.+++.+
T Consensus 203 ~~~~~~~~~~~~~~~~~lp~~~~~~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~ 282 (355)
T TIGR00896 203 TVFFGLQSGLYYSLIGWLPAILISHGASAATAGSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLVGLCGLLF 282 (355)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHH
Confidence 222223333344555677888776666543 346667788999999999999999994 565666666666666555543
Q ss_pred HHHhhcccCCCCChhHHHHHHHHHHHHhhhhccccceeecc-ccccchhhhhhhHHHHHHHHHHHHHHHHhHHHHhhccc
Q psy15864 320 YAQFHLSYGWDSPLVPTVFLVLAAFLTHICIRLLPWMLIGE-VFPNNIRATASGASGSSSYIFAFAVNKLYYPMLDTFHL 398 (553)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e-~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~~~g~ 398 (553)
. .+.... ....+++++.+..+... ...+.+ ..+++.++...++.+.+++++++++|.+.+.+.+..+.
T Consensus 283 ~---------~~~~~~-~~~~l~g~~~g~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l~~~~g~ 351 (355)
T TIGR00896 283 A---------PMHGLW-AWALVLGLGQGGAFPLA-LTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFVGVLHDISGN 351 (355)
T ss_pred h---------hhhHHH-HHHHHHHHhhhhHhHHH-HHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 2 111222 13344555554443222 244443 34567778889999999999999999999999988764
Q ss_pred h
Q psy15864 399 W 399 (553)
Q Consensus 399 ~ 399 (553)
+
T Consensus 352 ~ 352 (355)
T TIGR00896 352 W 352 (355)
T ss_pred c
Confidence 4
No 80
>PRK11043 putative transporter; Provisional
Probab=99.59 E-value=4.9e-14 Score=144.17 Aligned_cols=251 Identities=12% Similarity=0.070 Sum_probs=150.9
Q ss_pred cccccccccc--chhhhhhhhhccCcccccchhchhhhhHHHHHHHHHhhcccc----chHHHHHHHHHHHHHHHHHhcc
Q psy15864 90 GTFLYKMAAP--LVLVLTYVAEITQPHLRGMLSATASMTTIFGTVSQLFLGSFL----HWRSAAILNLLFPILALCALYF 163 (553)
Q Consensus 90 gr~~~G~ga~--~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~lG~~l~~~l~~~l----gWr~~f~i~~i~~li~~i~~~~ 163 (553)
.|+++|++.. .+...+++.|++|++++++..+.......+|.++++.+++.+ +||++|++.+++.++..++.++
T Consensus 100 ~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 179 (401)
T PRK11043 100 LRFVQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHFGWQAIFATLFAITLLLILPTLR 179 (401)
T ss_pred HHHHHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHH
Confidence 5788887654 334457889999999999888888877777777777776654 9999999998888777666655
Q ss_pred ccCCceeeeecCChHHHHHHHHHHcCCCCCcchHHHHHHHHHHHHHHHHHhcCCCCCCChhhhhhhhhcchhHHHHHHHH
Q psy15864 164 IPESPHWLISQGRMQEASASLCWLRGWVTPDKVQTELSQITKAIEESELKRLGKDGQRRPNYRMYMRRTFLLPYAIVTSL 243 (553)
Q Consensus 164 lpEsp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (553)
++++++. .+.++.. ..++.+.+++..+..++..
T Consensus 180 ~~~~~~~----~~~~~~~-----------------------------------------~~~~~~~~~~~~~~~~~~~-- 212 (401)
T PRK11043 180 LKPSKKA----RKQSQDA-----------------------------------------LTFKQLLKSKTYLGNVLIF-- 212 (401)
T ss_pred cCCCCCc----cccchHH-----------------------------------------HHHHHHHcChhHHHHHHHH--
Confidence 6554321 0000000 0111112221111111111
Q ss_pred HHHHhhhhhHHHHhhHHHHHHhhCCCCCh-HHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHHHHHHHHH
Q psy15864 244 FFIGQFGGMTTLQTYAVGIFESIHAPLDP-YFATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAACFIVVAVYAQ 322 (553)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~ 322 (553)
............+.|.+++..+.+... .+......++.++|.++.+++.||+|+|+.+....++.+++.+.+.....
T Consensus 213 --~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (401)
T PRK11043 213 --AACSAAFFAWLTGSPFILEQMGYSPADIGLSYVPQTIAFLVGGYGCRAALQKWGGEQLLPWLLVLFAVSVIAIWLASL 290 (401)
T ss_pred --HHHHHHHHHHHHHhHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 111122233445667776666665432 34445566788889999999999999988765555544444433322211
Q ss_pred hhcccCCCCChhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhHHHHhh
Q psy15864 323 FHLSYGWDSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYYPMLDT 395 (553)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~~ 395 (553)
.. ....+..++...+.+++.+... +....+..+..| +.||++.|+.+.+...++.+++.+.+.+.+.
T Consensus 291 ~~----~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~g~~~g~~~~~~~~~~~~~~~~~g~l~~~ 357 (401)
T PRK11043 291 LS----HPSLVPLLIPFCVMAAANGAIY-PIVVAQALRPFP-QATGKAAALQNTLQLGLCFLASLLVSALIST 357 (401)
T ss_pred hc----cCcHHHHHHHHHHHHHHHHHHH-HHHHHHHhhhCc-ccChHHHHHHHHHHHHHHHHHHHHHHHccCC
Confidence 00 2223333334444555544444 333355566666 5789999999999888889999888887664
No 81
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.58 E-value=3.6e-14 Score=144.01 Aligned_cols=261 Identities=13% Similarity=-0.052 Sum_probs=155.3
Q ss_pred cccccccccccc--hhhhhhhhhccCcccccchhchhhhhHHHHHHHHHhhcccc---chHHHHHHHHHHHHHHH-HHhc
Q psy15864 89 KGTFLYKMAAPL--VLVLTYVAEITQPHLRGMLSATASMTTIFGTVSQLFLGSFL---HWRSAAILNLLFPILAL-CALY 162 (553)
Q Consensus 89 ~gr~~~G~ga~~--~~~~~~i~e~~p~~~Rg~~~~~~~~~~~lG~~l~~~l~~~l---gWr~~f~i~~i~~li~~-i~~~ 162 (553)
-.|+++|++.+. +...+++.+..++++|+++++++..+..+|..+++.++..+ .++..++..++..+..+ ++..
T Consensus 99 ~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (381)
T PRK03633 99 AWRFVAGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKVSTELMSVLPWVTGLVLAAILPLLFT 178 (381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccchHHHHHHHHHHHHHHHHHh
Confidence 357888887653 34456778889999999999999999999999999988776 12222333222222222 2221
Q ss_pred cccCCceeeeecCChHHHHHHHHHHcCCCCCcchHHHHHHHHHHHHHHHHHhcCCCCCCChhhhhhhhhcchhHHHHHHH
Q psy15864 163 FIPESPHWLISQGRMQEASASLCWLRGWVTPDKVQTELSQITKAIEESELKRLGKDGQRRPNYRMYMRRTFLLPYAIVTS 242 (553)
Q Consensus 163 ~lpEsp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (553)
..++++. .+ + . .......++++..+..+..+
T Consensus 179 ~~~~~~~-----~~-~-----------------------------------------~-~~~~~~~~~~~~~~~~~~~~- 209 (381)
T PRK03633 179 RILNQQA-----EN-H-----------------------------------------D-STSIWPMLKLRQARLGVNGC- 209 (381)
T ss_pred cccCCCC-----CC-C-----------------------------------------C-CCCHHHHHHhcchHHHHHHH-
Confidence 2222110 00 0 0 00011111121111111111
Q ss_pred HHHHHhhhhhHHHHhhHHHHHHhhCCCCCh-HHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHHHHHHHH
Q psy15864 243 LFFIGQFGGMTTLQTYAVGIFESIHAPLDP-YFATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAACFIVVAVYA 321 (553)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~ 321 (553)
+...........++|.+++..+.+... .+...+..++.+++.++.|+++||+|+|+++..+..+.+++.+.+..
T Consensus 210 ---~~~~~~~~~~~~~lp~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~-- 284 (381)
T PRK03633 210 ---IISGIVLGSLYGLMPLYLNHQGMSDASIGFWMALLVSAGILGQWPIGRLADRFGRLLVLRVQVFVVILGSIAMLS-- 284 (381)
T ss_pred ---HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcHHHHHHHHHHHHHHHHHHhh--
Confidence 111112233345567777666665433 35566777888999999999999999998887776666655543321
Q ss_pred HhhcccCCCCChhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhHHHHhhccchhh
Q psy15864 322 QFHLSYGWDSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYYPMLDTFHLWGT 401 (553)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~~~g~~~~ 401 (553)
....+...++.+++.. ...+...+++.|..|++.++...+..+....+|+.++|.+.|.+.+..++...
T Consensus 285 ----------~~~~~~~~~l~g~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~~~g~~~~ 353 (381)
T PRK03633 285 ----------QAAMAPALFILGAAGF-TLYPVAMAWACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQNYSDNLL 353 (381)
T ss_pred ----------hHHHHHHHHHHHHHHH-hHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccHH
Confidence 1112223334443332 33344457778989888878778887788889999999999999998887766
Q ss_pred HHHHHHHHHHHHh
Q psy15864 402 LYFYAAISVVGTL 414 (553)
Q Consensus 402 ~~~~~~~~~~~~~ 414 (553)
+.+.+++.++..+
T Consensus 354 f~~~~~~~l~~~~ 366 (381)
T PRK03633 354 FIMIASVSFIYLL 366 (381)
T ss_pred HHHHHHHHHHHHH
Confidence 6666555554443
No 82
>PRK10054 putative transporter; Provisional
Probab=99.58 E-value=1.3e-14 Score=147.72 Aligned_cols=263 Identities=13% Similarity=0.032 Sum_probs=157.5
Q ss_pred hhhhhhhhhccCcccccchhchhhhhHHHHHHHHHhhcccc---chHHHHHHHHHHHHHHHHHh-ccccCCceeeeecCC
Q psy15864 101 VLVLTYVAEITQPHLRGMLSATASMTTIFGTVSQLFLGSFL---HWRSAAILNLLFPILALCAL-YFIPESPHWLISQGR 176 (553)
Q Consensus 101 ~~~~~~i~e~~p~~~Rg~~~~~~~~~~~lG~~l~~~l~~~l---gWr~~f~i~~i~~li~~i~~-~~lpEsp~~l~~~~~ 176 (553)
++..+++.|.+|+++|+++.++...+.++|.++++++++.+ +||.+|++.+++.++.+++. +++|++++- ++
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~~g~~~~f~~~~~~~~i~~i~~~~~~~~~~~~----~~ 190 (395)
T PRK10054 115 TVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVMQSINLPFWLAAICSAFPLVFIQIWVQRSEKA----IA 190 (395)
T ss_pred HHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHhccccc----cc
Confidence 34567789999999999999999999999999999888776 89999999888877765444 346654310 00
Q ss_pred hHHHHHHHHHHcCCCCCcchHHHHHHHHHHHHHHHHHhcCCCCCCChhhhhhhhhcchhHHHHHHHHHHHHhhhhhHHHH
Q psy15864 177 MQEASASLCWLRGWVTPDKVQTELSQITKAIEESELKRLGKDGQRRPNYRMYMRRTFLLPYAIVTSLFFIGQFGGMTTLQ 256 (553)
Q Consensus 177 ~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (553)
.++ . .. ...+..++++..+...+..++..+..........
T Consensus 191 ~~~-~----------------~~-----------------------~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 230 (395)
T PRK10054 191 TET-G----------------SV-----------------------WSPSVLLQDKALLWFTCSGFLASFVSGAFASCIS 230 (395)
T ss_pred cch-h----------------hh-----------------------hhhhhhccCceehHHHHHHHHHHHHHHHhhhhHH
Confidence 000 0 00 0001122222222222222222222111112222
Q ss_pred hhHHHHHHhhCCCCCh-HHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHHHHHHHHHhhcccCCCCChhH
Q psy15864 257 TYAVGIFESIHAPLDP-YFATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAACFIVVAVYAQFHLSYGWDSPLVP 335 (553)
Q Consensus 257 ~~~~~~~~~~g~~~~~-~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 335 (553)
.|.+.. ...+.+... .......++..++..+..|++.||.++|+.+.+++++.+++.+++.+. ..+.+.+
T Consensus 231 ~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~--------~~~~~~~ 301 (395)
T PRK10054 231 QYVMVV-ADSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAANIRPLMTAGTLCFVIGLVGFIFS--------GNSLLLW 301 (395)
T ss_pred HHHHHh-cccchHHHHHHHHHHhhhhheeeehhHHHHHHccCCchhHHHHHHHHHHHHHHHHHHc--------chHHHHH
Confidence 332222 112221111 233333444455556778899999999998887777776666555431 1233444
Q ss_pred HHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhHHHHhhccchhhHHHHHHHHHHHHhh
Q psy15864 336 TVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYYPMLDTFHLWGTLYFYAAISVVGTLY 415 (553)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 415 (553)
++...+++++.+.. .+...+++.+..|++.|+++.+..+ ...+|..++|.+.|.+.+..+....+.+.+++.+++.++
T Consensus 302 ~~~~~~~~~g~~~~-~p~~~~~~~~~~p~~~~~~~~~~~~-~~~~G~~~Gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~ 379 (395)
T PRK10054 302 GMSAAVFTVGEIIY-APGEYMLIDHIAPPGMKASYFSAQS-LGWLGAAINPLVSGVILTTLPPWSLFVILALAIVAAWLL 379 (395)
T ss_pred HHHHHHHHHHHHHH-HhhHHHHHHHhCCcccceehHhHHH-HHHHHHHHHHHHHHHHHHHcChhhHHHHHHHHHHHHHHH
Confidence 44555555554332 3444578889999999999988654 677899999999999999988766666665555555554
Q ss_pred heE
Q psy15864 416 MYF 418 (553)
Q Consensus 416 ~~~ 418 (553)
...
T Consensus 380 ~~~ 382 (395)
T PRK10054 380 MLK 382 (395)
T ss_pred HHh
Confidence 443
No 83
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.57 E-value=8e-14 Score=136.52 Aligned_cols=253 Identities=13% Similarity=0.088 Sum_probs=160.9
Q ss_pred cccccccc--chhhhhhhhhccCcccccchhchhhhhHHHHHHHHHhhcccc--------------------chHHHHHH
Q psy15864 92 FLYKMAAP--LVLVLTYVAEITQPHLRGMLSATASMTTIFGTVSQLFLGSFL--------------------HWRSAAIL 149 (553)
Q Consensus 92 ~~~G~ga~--~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~lG~~l~~~l~~~l--------------------gWr~~f~i 149 (553)
|+.|.|.. .+.+..|++++.|++++++.+++.+.++++|.+++|+++..+ +|+++|++
T Consensus 18 f~~g~G~~~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~~~~~~~~~~~~~yl~ 97 (310)
T TIGR01272 18 FVLASGLTILQVAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVATANAEAAKVHTPYLL 97 (310)
T ss_pred HHHHhhHHHHHhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhhhhhHHHHHHHHHHHH
Confidence 55666655 456779999999999999999999999999999999887632 59999997
Q ss_pred HHHHHHHHHHHhcc--ccCCceeeeecCChHHHHHHHHHHcCCCCCcchHHHHHHHHHHHHHHHHHhcCCCCCCChhhhh
Q psy15864 150 NLLFPILALCALYF--IPESPHWLISQGRMQEASASLCWLRGWVTPDKVQTELSQITKAIEESELKRLGKDGQRRPNYRM 227 (553)
Q Consensus 150 ~~i~~li~~i~~~~--lpEsp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (553)
.+++.+++.+++.+ +||.... .+ ++.. . ... ...+.
T Consensus 98 ia~~~~~~~i~~~~~~~p~~~~~----~~-~~~~----------~------------------------~~~---~~~~~ 135 (310)
T TIGR01272 98 LAGALAVLAIIFAFLPLPELQEA----DV-ARVS----------S------------------------GDT---TQKTS 135 (310)
T ss_pred HHHHHHHHHHHHHHccCCCCCcc----cc-cccc----------c------------------------ccc---cchhh
Confidence 76665555444433 4653210 00 0000 0 000 00001
Q ss_pred hhhhcchhHHHHHHHHHHHHhhhhhHHHHhhHHHHHHh---hCCCCC-hHHHHHHHHHHHHHHHHHHhhhhcccCCccee
Q psy15864 228 YMRRTFLLPYAIVTSLFFIGQFGGMTTLQTYAVGIFES---IHAPLD-PYFATLLLGVAELGGALLCVVLIHYTGKRPLA 303 (553)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~~~-~~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l 303 (553)
.. ..+.++...+..+.+.+.-..+..|.+.++.+ .+.+.+ .....+...++.++|.+++++++||+|+|+++
T Consensus 136 ~~----~~~~~~l~~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l 211 (310)
T TIGR01272 136 AF----QFTHLVLGALGIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYL 211 (310)
T ss_pred HH----hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHH
Confidence 11 12223333444455554556666777777753 355433 34667778889999999999999999998887
Q ss_pred ecchhHHHHHHHHHHHHHHhhcccCCCCChhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHH
Q psy15864 304 LISTGGSAACFIVVAVYAQFHLSYGWDSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAF 383 (553)
Q Consensus 304 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~ 383 (553)
.++.++.+++.++... ... .......++.+++.+..+..+ ++...+.+|.+ .+++.++. .++.+|++
T Consensus 212 ~~~~~l~~~~~~l~~~---------~~~-~~~~~~~~l~g~~~s~i~P~~-~s~a~~~~~~~-~~~asai~-~~~~~Gg~ 278 (310)
T TIGR01272 212 AFNAFLAVLLSIGAAL---------THG-YVAMWFVLALGLFNSIMFPTI-FSLALNALGRH-TSQGSGIL-CLAIVGGA 278 (310)
T ss_pred HHHHHHHHHHHHHHHH---------cCC-HHHHHHHHHHHHHHHHHHHHH-HHHHHhhhhhh-hhhhHHHH-HHHHhcch
Confidence 7766666555543332 222 222334556666665555443 46667777754 35666764 67889999
Q ss_pred HHHHHhHHHHhhccchhhHH
Q psy15864 384 AVNKLYYPMLDTFHLWGTLY 403 (553)
Q Consensus 384 i~~~~~~~~~~~~g~~~~~~ 403 (553)
+.|++.|.+.+..+....++
T Consensus 279 i~P~l~G~lad~~g~~~a~~ 298 (310)
T TIGR01272 279 IVPLLQGSLADCLGIQLAFA 298 (310)
T ss_pred HHHHHHHHHHHhccchHHHH
Confidence 99999999999877655554
No 84
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.57 E-value=9.6e-14 Score=141.71 Aligned_cols=264 Identities=14% Similarity=0.070 Sum_probs=152.3
Q ss_pred hhhhhhhhhccCcccccchhchhhhhHHHHHHHHHhhcccc---chHHHHHHHHHHHHHHHHHhcc-ccCCceeeeecCC
Q psy15864 101 VLVLTYVAEITQPHLRGMLSATASMTTIFGTVSQLFLGSFL---HWRSAAILNLLFPILALCALYF-IPESPHWLISQGR 176 (553)
Q Consensus 101 ~~~~~~i~e~~p~~~Rg~~~~~~~~~~~lG~~l~~~l~~~l---gWr~~f~i~~i~~li~~i~~~~-lpEsp~~l~~~~~ 176 (553)
+...+++.+..+ +++...+......++|.++++++++.+ +||++|++.++++++.+++.++ .|++|..
T Consensus 118 ~~~~~~~~~~~~--~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~------ 189 (396)
T TIGR00882 118 GAIEAYIEKVSR--NSNFEYGKARMFGCVGWALCASIAGILFSIDPQIVFWLGSGFALILMLLLMFAKPKAPSS------ 189 (396)
T ss_pred hhHHHHHHHhhh--hcccccchhhhhcccHHHHHHHHHhhhhccCchHHHHHHHHHHHHHHHHHHHhCCCCchh------
Confidence 334455555432 344555666666677777777776654 9999999998888877655544 4544321
Q ss_pred hHHHHHHHHHHcCCCCCcchHHHHHHHHHHHHHHHHHhcCCCCCCChhhhhhhhhcchhHHHHHHHHHHHHhhhhhHHHH
Q psy15864 177 MQEASASLCWLRGWVTPDKVQTELSQITKAIEESELKRLGKDGQRRPNYRMYMRRTFLLPYAIVTSLFFIGQFGGMTTLQ 256 (553)
Q Consensus 177 ~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (553)
+...+ ..... ...........+++++..+...+..+. ....+....
T Consensus 190 -~~~~~----~~~~~-------------------------~~~~~~~~~~~~l~~~~~~~~~l~~~~----~~~~~~~~~ 235 (396)
T TIGR00882 190 -ATVAN----ALGAN-------------------------ASAFSLKLALELFRQRKFWMFVLYVVG----VACVYDVFD 235 (396)
T ss_pred -hhhhc----ccccc-------------------------cCCCCHHHHHHHHcCCcHHHHHHHHHH----HHHHHHHHH
Confidence 00000 00000 000000112222333222222222111 111222222
Q ss_pred hhHHHHHHhh----CCCCC-hHHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHHHHHHHHHhhcccCCCC
Q psy15864 257 TYAVGIFESI----HAPLD-PYFATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAACFIVVAVYAQFHLSYGWDS 331 (553)
Q Consensus 257 ~~~~~~~~~~----g~~~~-~~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 331 (553)
.+.+.++... +.+.. ......+..+..+++.+..+++.||+|||+.+.++.++.+++.++... ..+
T Consensus 236 ~~~~~y~~~~~~~~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~~~~---------~~~ 306 (396)
T TIGR00882 236 QQFANFFTSFFATPQQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAKNALLIAGTIMSVRIIGSSF---------ATT 306 (396)
T ss_pred HHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHh---------cCC
Confidence 2333333322 22211 234455566777888899999999999999988877777776655443 445
Q ss_pred ChhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhH-HHHHHHHHHHHHHHHhHHHHhhccchhhHHHHHHHHH
Q psy15864 332 PLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGA-SGSSSYIFAFAVNKLYYPMLDTFHLWGTLYFYAAISV 410 (553)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~-~~~~~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~~~~ 410 (553)
.+.+++..++.+++...... ....+..+..|++.++++.++ .+....+++++++.+.|++.+..|+...+.+.+++.+
T Consensus 307 ~~~~~~~~~l~g~~~~~~~~-~~~~~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~~G~~~~f~~~~~~~~ 385 (396)
T TIGR00882 307 ALEVVILKMLHAFEVPFLLV-GCFKYITSQFDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYDSIGFQGAYLVLGCIVL 385 (396)
T ss_pred hHHHHHHHHHHHHHHHHHHH-HHHHHHHHhCCcceEEEeehHHHHHHHHHHHHHHHHhHHHHHHhcccHHHHHHHHHHHH
Confidence 66666666666665433322 233567778888888887766 5677899999999999999998887777777777666
Q ss_pred HHHhhh
Q psy15864 411 VGTLYM 416 (553)
Q Consensus 411 ~~~~~~ 416 (553)
+..++.
T Consensus 386 i~~~~~ 391 (396)
T TIGR00882 386 LFTLIS 391 (396)
T ss_pred HHHHHH
Confidence 665554
No 85
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.56 E-value=1.5e-13 Score=140.71 Aligned_cols=270 Identities=11% Similarity=0.016 Sum_probs=149.7
Q ss_pred cccccccccccc--hhhhhhhhhccCcccccchhchhhhhHHHHHHHHHhhcccc----chHHHHHHHHHHHHHHHHH-h
Q psy15864 89 KGTFLYKMAAPL--VLVLTYVAEITQPHLRGMLSATASMTTIFGTVSQLFLGSFL----HWRSAAILNLLFPILALCA-L 161 (553)
Q Consensus 89 ~gr~~~G~ga~~--~~~~~~i~e~~p~~~Rg~~~~~~~~~~~lG~~l~~~l~~~l----gWr~~f~i~~i~~li~~i~-~ 161 (553)
-.|+++|++.+. ++..+++.|++|+++|+++++++..+..+|.++++++++.+ |||+.|++.++++++.+++ +
T Consensus 109 ~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~~~f~~~~~~~~i~~~~~~ 188 (413)
T PRK15403 109 IARFIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFVHWKVLFAIIAVMGLIAFVGLL 188 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHH
Confidence 468999987653 34557889999999999999999999999998888887654 8999999999888877654 4
Q ss_pred ccccCCceeeeecCChHHHHHHHHHHcCCCCCcchHHHHHHHHHHHHHHHHHhcCCCCCCChhhhhhhhhcchhHHHHHH
Q psy15864 162 YFIPESPHWLISQGRMQEASASLCWLRGWVTPDKVQTELSQITKAIEESELKRLGKDGQRRPNYRMYMRRTFLLPYAIVT 241 (553)
Q Consensus 162 ~~lpEsp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (553)
+++||+++. +++.. ...... ..++..++++. ++..
T Consensus 189 ~~lp~~~~~---~~~~~----------------~~~~~~----------------------~~~~~ll~~~~----~~~~ 223 (413)
T PRK15403 189 LAMPETVKR---GAVPF----------------SAKSVL----------------------RDFRNVFRNRL----FLTG 223 (413)
T ss_pred HhCCCCccc---cCCCC----------------ChHHHH----------------------HHHHHHHcCHH----HHHH
Confidence 458887531 00000 000000 01112222222 2222
Q ss_pred HHHHHHhhhhhHHHHhhHHHHHHhh-CCCCCh-HHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHHHHHH
Q psy15864 242 SLFFIGQFGGMTTLQTYAVGIFESI-HAPLDP-YFATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAACFIVVAV 319 (553)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~-~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~ 319 (553)
.+..+........+..+.|.++.+. +.+... .+......++.++++.+.+.+.++.++++.+.....+..++.+++..
T Consensus 224 ~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~ig~~l~~~ 303 (413)
T PRK15403 224 AATLSLSYIPMMSWVAVSPVILIDAGGMTTSQFAWTQVPVFGAVIVANAIVARFVKDPTEPRFIWRAVPIQLVGLALLIV 303 (413)
T ss_pred HHHHHHHHHHHHHHHHhChHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHH
Confidence 2222333333444555667666553 555433 34445566677777777777654444433332223333334333322
Q ss_pred HHHhhcccCCCCChhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhHHHHhhccch
Q psy15864 320 YAQFHLSYGWDSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYYPMLDTFHLW 399 (553)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~~~g~~ 399 (553)
..... ..+.+..++..++++++.+.....+. .. +-.-....+|++.++.+.....+..+++.+.+++.+. +..
T Consensus 304 ~~~~~----~~~~~~~~~~~~l~~~G~~~~~p~~~-~~-al~~~~~~~G~a~a~~~~~~~~~~~~~~~~~g~~~~~-~~~ 376 (413)
T PRK15403 304 GNLLW----PHVWLWSVLGTSLYAFGIGLIFPTLF-RF-TLFSNNLPKGTVSASLNMVILMVMAVSVEIGRWLWFN-GGR 376 (413)
T ss_pred HHHHc----cccHHHHHHHHHHHHHHHHHHhHHHH-HH-HhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCc
Confidence 11100 12222234455555555544443332 11 1111222468999988888888888888888877655 333
Q ss_pred hhHHHHHHHHH
Q psy15864 400 GTLYFYAAISV 410 (553)
Q Consensus 400 ~~~~~~~~~~~ 410 (553)
..+....+++.
T Consensus 377 ~~~~~~~~~~~ 387 (413)
T PRK15403 377 LPFHLLAVVAG 387 (413)
T ss_pred hHHHHHHHHHH
Confidence 34444433333
No 86
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.56 E-value=1.5e-13 Score=140.06 Aligned_cols=257 Identities=14% Similarity=0.048 Sum_probs=146.6
Q ss_pred hhhhccCcccccchhchhhhhHHHHHHHHHhhccc----cchHHHHHHHHHHHHHHHHHhccccCCceeeeecCChHHHH
Q psy15864 106 YVAEITQPHLRGMLSATASMTTIFGTVSQLFLGSF----LHWRSAAILNLLFPILALCALYFIPESPHWLISQGRMQEAS 181 (553)
Q Consensus 106 ~i~e~~p~~~Rg~~~~~~~~~~~lG~~l~~~l~~~----lgWr~~f~i~~i~~li~~i~~~~lpEsp~~l~~~~~~~~a~ 181 (553)
+..|..++++++...+....+..+|.++++.+..+ +|||.+|++.+++.++.++..++++++++. .+.+...
T Consensus 121 ~~~~~~~~~~~~~~~~~~~~g~~lG~~~g~~~~~~l~~~~gw~~~f~~~a~l~~~~~~~~~~~~~~~~~--~~~~~~~-- 196 (390)
T TIGR02718 121 MAAEHFNGRTLAKGNAVQIAGVMIGFFGGGAGTLVLFGKFGQRPAFLLVACVPLASLVCVLWLKDRAVA--SPEAPLA-- 196 (390)
T ss_pred HHHHhCCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHcCCCCcC--ccccchh--
Confidence 45677777777877777888888888888865443 399999999998887766555555443210 0000000
Q ss_pred HHHHHHcCCCCCcchHHHHHHHHHHHHHHHHHhcCCCCCCChhhhhhhhhcchhHHHHHHHHHHHHhhhhhHHHHhhHHH
Q psy15864 182 ASLCWLRGWVTPDKVQTELSQITKAIEESELKRLGKDGQRRPNYRMYMRRTFLLPYAIVTSLFFIGQFGGMTTLQTYAVG 261 (553)
Q Consensus 182 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (553)
. ...+..+++++..+..+...++.. ........+.+.
T Consensus 197 -----------------~----------------------~~~~~~~l~~~~~~~~~~~~~l~~----~~~~~~~~~~~~ 233 (390)
T TIGR02718 197 -----------------R----------------------RASLFRFFRRPLAWSLLALALLSA----MTAVSGFGLSKL 233 (390)
T ss_pred -----------------h----------------------HHHHHHHHcCcCHHHHHHHHHHHH----HHHHHHHHHhhH
Confidence 0 011122333332222222222222 222223334555
Q ss_pred HHHhhCCCCChH-HHHHHHH-HHHHHHHHHHhhhhcccCCcceeecchhHHHHHHHHHHHHHHhhcccCCCCChhHHHHH
Q psy15864 262 IFESIHAPLDPY-FATLLLG-VAELGGALLCVVLIHYTGKRPLALISTGGSAACFIVVAVYAQFHLSYGWDSPLVPTVFL 339 (553)
Q Consensus 262 ~~~~~g~~~~~~-~~~~~~~-i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (553)
++.+.|++.+.. +.....+ +..+++.+++|++.||+|+|+.+.++.++.++..+.......... .......+...
T Consensus 234 ~l~~~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 310 (390)
T TIGR02718 234 YLVDAGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGVGLAGSLALLWFAQAAFWL---APGIAVAWSCS 310 (390)
T ss_pred HHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHccc---CCcHHHHHHHH
Confidence 666667764432 3333343 466778899999999999998887766555333322221111000 11112222222
Q ss_pred HHHHHHHhhhhccccceeecccccc-chhhhhhhHHHHHHHHHHHHHHHHhHHHHhhccchhhHHHHHHHHHHHH
Q psy15864 340 VLAAFLTHICIRLLPWMLIGEVFPN-NIRATASGASGSSSYIFAFAVNKLYYPMLDTFHLWGTLYFYAAISVVGT 413 (553)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~e~~p~-~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 413 (553)
.+.+++.+...... ++++.+..++ +.+++.+++.+.+..++..++|.+.|.+.+..|+...+.+.+++.++..
T Consensus 311 ~~~~~~~g~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~~G~~~~f~~~~~~~l~a~ 384 (390)
T TIGR02718 311 AFGSLITGITSVAI-YTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTDRFGYAGGFLSGTVLAVLAI 384 (390)
T ss_pred HHHHHHHHHHHHHH-HHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHH
Confidence 23333334443333 3555556655 8899999999999999999999999999998886555655554444433
No 87
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.53 E-value=2.7e-13 Score=128.38 Aligned_cols=257 Identities=18% Similarity=0.096 Sum_probs=175.5
Q ss_pred ccccccc--cchhhhhhhhhccCcccccchhchhhhhHHHHHHHHHhhcccc-----chHHHHHHHHHHHHHHHHHhccc
Q psy15864 92 FLYKMAA--PLVLVLTYVAEITQPHLRGMLSATASMTTIFGTVSQLFLGSFL-----HWRSAAILNLLFPILALCALYFI 164 (553)
Q Consensus 92 ~~~G~ga--~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~lG~~l~~~l~~~l-----gWr~~f~i~~i~~li~~i~~~~l 164 (553)
.+.|.|. ..++.|++|-+.+| ++-+.++++|.+..++|..+++.+...+ |||..+.+-+.++++++++|+.-
T Consensus 107 ~l~G~gIav~nVLLPslIK~~Fp-k~~~~mtglYs~sl~~~aaLaa~lavpla~~~~gW~~aL~~WAl~allAl~~WlPq 185 (395)
T COG2807 107 LLAGAGIAVINVLLPSLIKRDFP-KRVGLMTGLYSTSLGAGAALAAALAVPLAQHSGGWRGALGFWALLALLALLIWLPQ 185 (395)
T ss_pred HHHHhhHHHHHHhhhHHHHhhcc-cchhhHHhHHHHHHHHHHHHHhhhhhHHHHhhccHHHHHHHHHHHHHHHHHHHhhh
Confidence 3444443 34577889999997 5579999999999999888887766554 79999999999999988877643
Q ss_pred cCCceeeeecCChHHHHHHHHHHcCCCCCcchHHHHHHHHHHHHHHHHHhcCCCCCCChhhhhhhhhcchhHHHHHHHHH
Q psy15864 165 PESPHWLISQGRMQEASASLCWLRGWVTPDKVQTELSQITKAIEESELKRLGKDGQRRPNYRMYMRRTFLLPYAIVTSLF 244 (553)
Q Consensus 165 pEsp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (553)
. .|.. .... ........ +.++.+..+...++
T Consensus 186 ~--~r~~----~~~~---------------------------------------~~~~~~~~----~vw~~~~aW~vtLf 216 (395)
T COG2807 186 A--LREQ----AASI---------------------------------------ATKLVSVR----KVWRSPLAWQVTLF 216 (395)
T ss_pred c--cccc----cccc---------------------------------------cccccccc----ccccCchhHHHHHH
Confidence 2 2210 0000 00000111 12333445566666
Q ss_pred HHHhhhhhHHHHhhHHHHHHhhCCCCCh-HHHHHHHHHHHHHHHHHHhhhhccc-CCcceeecchhHHHHHHHHHHHHHH
Q psy15864 245 FIGQFGGMTTLQTYAVGIFESIHAPLDP-YFATLLLGVAELGGALLCVVLIHYT-GKRPLALISTGGSAACFIVVAVYAQ 322 (553)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~i~~~~g~~~~g~l~dr~-Grr~~l~~~~~~~~i~~~~~~~~~~ 322 (553)
+..+...++....|+|.++.+.|++.+. .+..++..+..++.+++...+++|. .+|+..+....++.++.+.+.+.+
T Consensus 217 mGlqS~~~Y~~~~WLP~ili~~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~G~~G~~~~P- 295 (395)
T COG2807 217 MGLQSLLYYIVIGWLPAILIDRGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLVGLVGLLLAP- 295 (395)
T ss_pred HHhhHHHHHHHHHHHHHHHHHcCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhh-
Confidence 6777777888999999999999987654 4777788899999999999999975 466666777777777777666532
Q ss_pred hhcccCCCCChhHHHHHHHHHHHHhhhhccccceeeccc-cccchhhhhhhHHHHHHHHHHHHHHHHhHHHHhhccchhh
Q psy15864 323 FHLSYGWDSPLVPTVFLVLAAFLTHICIRLLPWMLIGEV-FPNNIRATASGASGSSSYIFAFAVNKLYYPMLDTFHLWGT 401 (553)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~-~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~~~g~~~~ 401 (553)
.+.+.+. .+++|++.+..+. +..+.+..- ..++.-+...|+.+.++++.+..+|+++|++.|..|.|..
T Consensus 296 -------~~~~~lw--~~llG~G~G~~F~-laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~gsw~~ 365 (395)
T COG2807 296 -------GQLPILW--ALLLGLGQGGAFP-LALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDATGSWSA 365 (395)
T ss_pred -------hhHHHHH--HHHHhCccchHHH-HHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHHhcCChHH
Confidence 1222222 3556665555543 333444443 3456667788999999999999999999999999987776
Q ss_pred HHHHHHHH
Q psy15864 402 LYFYAAIS 409 (553)
Q Consensus 402 ~~~~~~~~ 409 (553)
.+...++.
T Consensus 366 ~~~~l~~~ 373 (395)
T COG2807 366 PLVLLALA 373 (395)
T ss_pred HHHHHHHH
Confidence 55543333
No 88
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.53 E-value=1.2e-13 Score=144.93 Aligned_cols=151 Identities=15% Similarity=0.002 Sum_probs=107.0
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHHHHHHHHHhhccc---CCCCChhHHHHHHHHHHHHhh
Q psy15864 272 PYFATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAACFIVVAVYAQFHLSY---GWDSPLVPTVFLVLAAFLTHI 348 (553)
Q Consensus 272 ~~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 348 (553)
..+...+..++.+++++++|+++||+|||++++++.++++++.++.++........ .....+.+++.+++.|++.+.
T Consensus 57 ~~~~~s~~~ig~~~~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~ 136 (479)
T PRK10077 57 LGFCVASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRIIGGIGVGL 136 (479)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHhhhHhH
Confidence 34677788899999999999999999999999999888887776665421100000 011234566788888888877
Q ss_pred hhccccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhHHHH--------hhccchhhHHHHHHHHHHHHhhheEEc
Q psy15864 349 CIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYYPML--------DTFHLWGTLYFYAAISVVGTLYMYFVM 420 (553)
Q Consensus 349 ~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~--------~~~g~~~~~~~~~~~~~~~~~~~~~~~ 420 (553)
..... .++++|.+|++.||.++++......+|..+++.+...+. +..+|++.+++.+++.++. ++..+++
T Consensus 137 ~~~~~-~~~i~e~~~~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~-~~~~~~l 214 (479)
T PRK10077 137 ASMLS-PMYIAEIAPAHIRGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLNTDGWRYMFASEAIPALLF-LMLLYFV 214 (479)
T ss_pred HhhHH-HHHHHhhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccCChHHHHHHHHHHHHHH-HHHHHcC
Confidence 66555 489999999999999999988888888877765544332 2356666666554444444 4445678
Q ss_pred ccCC
Q psy15864 421 PETE 424 (553)
Q Consensus 421 pet~ 424 (553)
||+.
T Consensus 215 ~~s~ 218 (479)
T PRK10077 215 PETP 218 (479)
T ss_pred CCCc
Confidence 9874
No 89
>PRK10133 L-fucose transporter; Provisional
Probab=99.53 E-value=2.2e-13 Score=140.33 Aligned_cols=258 Identities=13% Similarity=0.014 Sum_probs=149.0
Q ss_pred ccccccccccc--chhhhhhhhhccCcccccchhchhhhhHHHHHHHHHhhccc--------------------------
Q psy15864 89 KGTFLYKMAAP--LVLVLTYVAEITQPHLRGMLSATASMTTIFGTVSQLFLGSF-------------------------- 140 (553)
Q Consensus 89 ~gr~~~G~ga~--~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~lG~~l~~~l~~~-------------------------- 140 (553)
-+|+++|+|.+ .+...+++.++.|+++|+..+++.+.++.+|.+++++++..
T Consensus 122 ~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l~~~~~~~~~~~~~~~l~~~~~~~w~ 201 (438)
T PRK10133 122 VGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLILSNVPHQSQDVLDKMTPEQLSAYK 201 (438)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhhccChhhHHHHH
Confidence 46888888765 34556788898777777777888888888888888766421
Q ss_pred ----cchHHHHHHHH-HHHHHHHHH-hccccCCceeeeecCChHHHHHHHHHHcCCCCCcchHHHHHHHHHHHHHHHHHh
Q psy15864 141 ----LHWRSAAILNL-LFPILALCA-LYFIPESPHWLISQGRMQEASASLCWLRGWVTPDKVQTELSQITKAIEESELKR 214 (553)
Q Consensus 141 ----lgWr~~f~i~~-i~~li~~i~-~~~lpEsp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (553)
.+||++|++.. +..++++++ ...+||.+.- .+.+...
T Consensus 202 ~~~~~~w~~~f~~~~~v~~~~~~~~~~~~~p~~~~~----~~~~~~~--------------------------------- 244 (438)
T PRK10133 202 HSLVLSVQTPYMIIVAIVLLVALLIMLTKFPALQSD----NHSDAKQ--------------------------------- 244 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcc----ccccccc---------------------------------
Confidence 15677776433 333333332 2335553210 0000000
Q ss_pred cCCCCCCChhhhhhhhhcchhHHHHHHHHHHHHhhhhhHHHHhhHHHHH-H-hhCCCCC-hHHHHHHHHHHHHHHHHHHh
Q psy15864 215 LGKDGQRRPNYRMYMRRTFLLPYAIVTSLFFIGQFGGMTTLQTYAVGIF-E-SIHAPLD-PYFATLLLGVAELGGALLCV 291 (553)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~g~~~~-~~~~~~~~~i~~~~g~~~~g 291 (553)
.......+.+++++..+...+.. ++..........|.+.++ + ..+.+.. ..+......++.++|.++++
T Consensus 245 ----~~~~~~~~~ll~~~~~~~~~l~~----~~~~~~~~~~~~~~~~~l~~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g 316 (438)
T PRK10133 245 ----GSFSASLSRLARIRHWRWAVLAQ----FCYVGAQTACWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGT 316 (438)
T ss_pred ----cchhhhHHHHHhCchHHHHHHHH----HHHHHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00001112222222222222222 222223333334555453 3 3465543 34667788899999999999
Q ss_pred hhhcccCCcceeecchhHHHHHHHHHHHHHHhhcccCCCCChhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhh
Q psy15864 292 VLIHYTGKRPLALISTGGSAACFIVVAVYAQFHLSYGWDSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATAS 371 (553)
Q Consensus 292 ~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~ 371 (553)
++.||+|+|+++..+.++.++++++..+ .... ..++...+.+++.+..+.++ +....+.+|.+ .+++.
T Consensus 317 ~l~~r~g~~~~l~~~~~~~~~~~~~~~~---------~~~~-~~~~~~~l~glg~~~i~P~~-~s~a~~~~~~~-~~~as 384 (438)
T PRK10133 317 WLISRFAPHKVLAAYALIAMALCLISAF---------AGGH-VGLIALTLCSAFMSIQYPTI-FSLGIKNLGQD-TKYGS 384 (438)
T ss_pred HHHHHcCHHHHHHHHHHHHHHHHHHHHH---------cCCh-HHHHHHHHHHHHHHHHHHHH-HHHHHcccchh-hccch
Confidence 9999999999887776665555444333 2222 23445566677776665444 57777877754 46777
Q ss_pred hHHHHHHHHHHHHHHHHhHHHHhhcc-chhhHHH
Q psy15864 372 GASGSSSYIFAFAVNKLYYPMLDTFH-LWGTLYF 404 (553)
Q Consensus 372 ~~~~~~~~~~~~i~~~~~~~~~~~~g-~~~~~~~ 404 (553)
++.. +..+++.++|.+.+.+.+..+ ....+++
T Consensus 385 ~l~~-~~~~g~~~~~~i~G~l~~~~g~~~~~~~v 417 (438)
T PRK10133 385 SFIV-MTIIGGGIVTPVMGFVSDAAGNIPTAELI 417 (438)
T ss_pred hHHh-HHhccchHHHHHHHHHHHhccchHHHHHH
Confidence 7765 455788899999998888766 3444443
No 90
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.52 E-value=4.7e-13 Score=137.58 Aligned_cols=283 Identities=15% Similarity=0.163 Sum_probs=177.2
Q ss_pred hhhhhccCcccc--------------------------cchhchhhhhHHHHHHHHHhhcccc------------chHHH
Q psy15864 105 TYVAEITQPHLR--------------------------GMLSATASMTTIFGTVSQLFLGSFL------------HWRSA 146 (553)
Q Consensus 105 ~~i~e~~p~~~R--------------------------g~~~~~~~~~~~lG~~l~~~l~~~l------------gWr~~ 146 (553)
+|+.|+.+++.+ ++.++.-.....+|.++.-+++..+ +-|..
T Consensus 149 a~LP~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~~~~~~~~r~~ 228 (477)
T PF11700_consen 149 AYLPDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGSTASNTWAIRVA 228 (477)
T ss_pred HHhHhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccchhhhHH
Confidence 888999998888 8999888887778877766554332 24888
Q ss_pred HHHHHHHHHHH-HHHhccccCCceeeeecCChHHHHHHHHHHcCCCCCcchHHHHHHHHHHHHHHHHHhcCCCCCCChhh
Q psy15864 147 AILNLLFPILA-LCALYFIPESPHWLISQGRMQEASASLCWLRGWVTPDKVQTELSQITKAIEESELKRLGKDGQRRPNY 225 (553)
Q Consensus 147 f~i~~i~~li~-~i~~~~lpEsp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (553)
+.+.++.-++. +...+++|+.|+......... .....+.++... +
T Consensus 229 ~~~~a~ww~vfsiP~~~~~~~~~~~~~~~~~~~----------------~~~~g~~~l~~t------------------~ 274 (477)
T PF11700_consen 229 FLIVALWWLVFSIPLFLWLPDRPGPRPLPSGSS----------------YLRFGFKRLWRT------------------F 274 (477)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCCCCCCCcchh----------------HHHHHHHHHHHH------------------H
Confidence 88888776655 555666888764200000000 001111111111 1
Q ss_pred hhhhhhcchhHHHHHHHHHHHHhhhhhHHHHhhHHHHHH-hhCCCCChH-HHHHHHHHHHHHHHHHHhhhhcccCCc--c
Q psy15864 226 RMYMRRTFLLPYAIVTSLFFIGQFGGMTTLQTYAVGIFE-SIHAPLDPY-FATLLLGVAELGGALLCVVLIHYTGKR--P 301 (553)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~-~~~~~~~i~~~~g~~~~g~l~dr~Grr--~ 301 (553)
+...+ .+-+..+++.++.+..+...+..+...+.. ..+++.... ...++..+.+++|++++|++.||+|.| +
T Consensus 275 k~~~~----~~~~~~fLia~~l~~dg~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~ 350 (477)
T PF11700_consen 275 KEIRK----LRQLFLFLIAYFLYSDGVNTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKR 350 (477)
T ss_pred HHHHh----ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhH
Confidence 11111 222233344444444555555555555544 567765443 556677899999999999999999998 6
Q ss_pred eeecchhHHHHHHHHHHHHHHhhcccCCCCChhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHH
Q psy15864 302 LALISTGGSAACFIVVAVYAQFHLSYGWDSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIF 381 (553)
Q Consensus 302 ~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~ 381 (553)
+++++.++..+..+.. ++.......+..+.+.+++..++.|++.|... +..-++.+++.|+...+..+|+....+...
T Consensus 351 ~l~~~l~~~~~i~~~g-~~G~~~~~~g~~~~~~f~~~a~~~G~~~G~~q-s~sRs~~~~LiP~g~e~efFgly~i~gk~s 428 (477)
T PF11700_consen 351 TLLISLILWIIIPLYG-LFGFWPSFFGLKSPWEFWVLAVLIGLFMGGIQ-SASRSLFSRLIPPGREAEFFGLYAITGKAS 428 (477)
T ss_pred HHHHHHHHHHHHHHHH-HHHhhhcccCcccHHHHHHHHHHHHHHhhhHH-HHHHHHHHHhCCCchhhHHHHHHHHHHHHH
Confidence 6665554443222221 11100111113466777777788888776555 444588899999999999999999999999
Q ss_pred HHHHHHHhHHHHhhccchhhHHHHHHHHHHHHhhheEEcccCCCCC
Q psy15864 382 AFAVNKLYYPMLDTFHLWGTLYFYAAISVVGTLYMYFVMPETEGRT 427 (553)
Q Consensus 382 ~~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~pet~~~~ 427 (553)
++++|.+++.+.+..+..+.-+....+..++.++++++++..+++.
T Consensus 429 s~lGPll~g~i~~~tg~~r~g~~~l~~lf~~gl~ll~~v~~~~g~~ 474 (477)
T PF11700_consen 429 SWLGPLLFGLITDATGSQRYGFLFLLVLFLIGLILLFFVDVEKGRE 474 (477)
T ss_pred HHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHhhccchhhhh
Confidence 9999999999998887554444444444444444556676665543
No 91
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.52 E-value=2.5e-13 Score=141.06 Aligned_cols=271 Identities=17% Similarity=0.097 Sum_probs=174.9
Q ss_pred cccccccc--chhhhhhhhhccCcccccchhchhhhhHHHHHHHHHhhcccc----chHHHHHHHHHHHHHHHHHhcccc
Q psy15864 92 FLYKMAAP--LVLVLTYVAEITQPHLRGMLSATASMTTIFGTVSQLFLGSFL----HWRSAAILNLLFPILALCALYFIP 165 (553)
Q Consensus 92 ~~~G~ga~--~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~lG~~l~~~l~~~l----gWr~~f~i~~i~~li~~i~~~~lp 165 (553)
|+.|++.. .+.-.+++.|+.|+++...+.++.++..++..++||.+++.+ |-.++|++.++..++.+++.+.++
T Consensus 111 fl~g~~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPalgG~Lva~~G~~~~f~inalsfl~~i~~l~~~~ 190 (524)
T PF05977_consen 111 FLLGIGSAFFNPAWQAIIPELVPKEDLPAANALNSISFNIARIIGPALGGILVAFFGAAAAFLINALSFLISILALLRWK 190 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 34444433 234558899999999999999999999988888888888765 778888888776555544433333
Q ss_pred CCceeeeecCChHHHHHHHHHHcCCCCCcchHHHHHHHHHHHHHHHHHhcCCCCCCChhhhhhhhhcchhHHHHHHHHHH
Q psy15864 166 ESPHWLISQGRMQEASASLCWLRGWVTPDKVQTELSQITKAIEESELKRLGKDGQRRPNYRMYMRRTFLLPYAIVTSLFF 245 (553)
Q Consensus 166 Esp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (553)
..+. ..+. ..+. -...+. ..++.....+..+..++..+++.
T Consensus 191 ~~~~----~~~~-~~e~----------------~~~~l~------------------~G~ryv~~~~~l~~~l~~~~~~~ 231 (524)
T PF05977_consen 191 PPPP----PSSL-PRER----------------FFSALR------------------EGLRYVRSSPPLRSVLLRSFLFN 231 (524)
T ss_pred cccc----cccc-chhh----------------hhhhHH------------------HHHHHHhcchHHHHHHHHHHHHH
Confidence 2111 0000 0000 001111 11222333333333322222222
Q ss_pred HHhhhhhHHHHhhHHHHHH-hhCCCCCh-HHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHHHHHHHHHh
Q psy15864 246 IGQFGGMTTLQTYAVGIFE-SIHAPLDP-YFATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAACFIVVAVYAQF 323 (553)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~-~~g~~~~~-~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~ 323 (553)
+. ...+...+|.+.. ..+.+... .+.....++|+++|+++.+++.+++++++++..+.++.+++.+++++
T Consensus 232 l~----~~a~~aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~lal---- 303 (524)
T PF05977_consen 232 LF----ASAVWALLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSRRLVLLASLLFALALLLLAL---- 303 (524)
T ss_pred Hh----hhHHHHhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHHHhc----
Confidence 21 1122233555543 34443333 36677889999999999999999999988888888777777766665
Q ss_pred hcccCCCCChhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhHHHHhhccchhhHH
Q psy15864 324 HLSYGWDSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYYPMLDTFHLWGTLY 403 (553)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~~~g~~~~~~ 403 (553)
..+.+..++..++.|++........ .+.+....|.+.||+++++...+...+..++..+.|.+.+..+....+.
T Consensus 304 -----~~~~~~~~~~l~l~G~~~~~~~~~~-~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~~~g~~~al~ 377 (524)
T PF05977_consen 304 -----SPSFWLALIALFLAGAAWIIANSSL-NTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLADHFGVRTALL 377 (524)
T ss_pred -----chHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHH
Confidence 5566677777777777765554444 4788899999999999999999999999999999999999888776666
Q ss_pred HHHHHHHHHHhh
Q psy15864 404 FYAAISVVGTLY 415 (553)
Q Consensus 404 ~~~~~~~~~~~~ 415 (553)
+.+++.++..++
T Consensus 378 ~a~~~lll~~~~ 389 (524)
T PF05977_consen 378 IAGAALLLSALI 389 (524)
T ss_pred HHHHHHHHHHHH
Confidence 555444444443
No 92
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.51 E-value=4.2e-13 Score=137.01 Aligned_cols=247 Identities=11% Similarity=0.022 Sum_probs=151.1
Q ss_pred cccccccccccc--hhhhhhhhhccCcccccchhchhhhhHHHHHHHHHhhcccc-------------------------
Q psy15864 89 KGTFLYKMAAPL--VLVLTYVAEITQPHLRGMLSATASMTTIFGTVSQLFLGSFL------------------------- 141 (553)
Q Consensus 89 ~gr~~~G~ga~~--~~~~~~i~e~~p~~~Rg~~~~~~~~~~~lG~~l~~~l~~~l------------------------- 141 (553)
-+|++.|+|.+. +...+++.++.|+++|++.+++.+.+..+|..+++.++..+
T Consensus 99 ~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (410)
T TIGR00885 99 VGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLILSNLPHQSQDVLDKLSPEELSAIK 178 (410)
T ss_pred HHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccchhhhhhhcCHHHHHHHH
Confidence 457788887654 34568889999999999999999999988888887765432
Q ss_pred -----chHHHHHHHHHHHHHHHHHhcc--ccCCceeeeecCChHHHHHHHHHHcCCCCCcchHHHHHHHHHHHHHHHHHh
Q psy15864 142 -----HWRSAAILNLLFPILALCALYF--IPESPHWLISQGRMQEASASLCWLRGWVTPDKVQTELSQITKAIEESELKR 214 (553)
Q Consensus 142 -----gWr~~f~i~~i~~li~~i~~~~--lpEsp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (553)
+||++|++.+++.++.+++..+ +|+.+. .+.++ .
T Consensus 179 ~~~~~~w~~~fl~~a~~~~~~~~~~~~~~~p~~~~-----~~~~~--------------~-------------------- 219 (410)
T TIGR00885 179 HSDLASVQTPYMIIGAVVLAVALLIMLTKMPALNH-----SDAKQ--------------I-------------------- 219 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCc-----ccccc--------------c--------------------
Confidence 4999999988877766544433 454221 00000 0
Q ss_pred cCCCCCCChhhhhhhhhcchhHHHHHHHHHHHHhhhhhHHHHhhHHHHHHhhCCCCCh---HHHHHHHHHHHHHHHHHHh
Q psy15864 215 LGKDGQRRPNYRMYMRRTFLLPYAIVTSLFFIGQFGGMTTLQTYAVGIFESIHAPLDP---YFATLLLGVAELGGALLCV 291 (553)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~---~~~~~~~~i~~~~g~~~~g 291 (553)
......+.+.+++......+..++ +.........|++.+....+...+. .........+.++|.++++
T Consensus 220 -----~~~~~~~~~~~~~~~~~~~l~~f~----yvg~e~~~~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~ 290 (410)
T TIGR00885 220 -----SFSASLSRLARIRHYREGVIAQFF----YVGVQIMCWTFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGT 290 (410)
T ss_pred -----cchhhHHHHHhChhHHHHHHHHHH----HHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 000011112222222222222222 2222333445666666543322221 2233444467789999999
Q ss_pred hhhcccCCcceeecchhHHHHHHHHHHHHHHhhcccCCCCChhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhh
Q psy15864 292 VLIHYTGKRPLALISTGGSAACFIVVAVYAQFHLSYGWDSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATAS 371 (553)
Q Consensus 292 ~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~ 371 (553)
++.||+++|+++.++.++.++..++... .... ..++...+.+++.+..+ |..++...+..+++.+..+.
T Consensus 291 ~l~~r~~~~~~l~i~~~~~~~~~ll~~~---------~~~~-~~~~~l~~~glf~s~~f-p~i~sl~~~~~g~~~~~~s~ 359 (410)
T TIGR00885 291 WLISYLAAHKVLMAYAIIGMALCLGSIF---------AGGH-VGLYCLTLCSAFMSLMF-PTIYGIALKGLGQDTKYGAA 359 (410)
T ss_pred HHHHHcCHHHHHHHHHHHHHHHHHHHHH---------cCCh-HHHHHHHHHHHHHHHHH-HHHHHHHHhhhhhhhhhhHH
Confidence 9999999999877776666666555554 2232 33455566666776666 55568888888877654444
Q ss_pred hHHHHHHHHHHHHHHHHhHHHHhhc
Q psy15864 372 GASGSSSYIFAFAVNKLYYPMLDTF 396 (553)
Q Consensus 372 ~~~~~~~~~~~~i~~~~~~~~~~~~ 396 (553)
++.. ..+|+.+.|++.|.+.|..
T Consensus 360 ~l~~--~~~Gga~~p~l~G~~~d~~ 382 (410)
T TIGR00885 360 GLVM--AIIGGGIVPPLQGFIIDMK 382 (410)
T ss_pred HHHH--HHhccchHHHHHHHHHHHh
Confidence 4433 3499999999999999853
No 93
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.49 E-value=1.1e-13 Score=139.57 Aligned_cols=250 Identities=16% Similarity=0.081 Sum_probs=137.0
Q ss_pred ccccccccccc-chhhhhhhhhccCcccccchhchhhhhHHHHHHHHHhh----cc----------ccchHHHH-HHHHH
Q psy15864 89 KGTFLYKMAAP-LVLVLTYVAEITQPHLRGMLSATASMTTIFGTVSQLFL----GS----------FLHWRSAA-ILNLL 152 (553)
Q Consensus 89 ~gr~~~G~ga~-~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~lG~~l~~~l----~~----------~lgWr~~f-~i~~i 152 (553)
-+|+++|++.. .....++++|++|+++|++++++...+..+|..+++++ .. ..+||+.| ++.++
T Consensus 96 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~w~~~~~~~~~~ 175 (366)
T TIGR00886 96 LLRLFIGIAGGSFASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFGAGLPAHLAWGWAFVIVPAG 175 (366)
T ss_pred HHHHHHHHhchhhHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcccccccccccchhHHHHHH
Confidence 46888888654 44567889999999999999999885555555544433 32 12799999 44454
Q ss_pred HHHHH-HHHhccccCCceeeeecCChHHHHHHHHHHcCCCCCcchHHHHHHHHHHHHHHHHHhcCCCCCCChhhhhhhhh
Q psy15864 153 FPILA-LCALYFIPESPHWLISQGRMQEASASLCWLRGWVTPDKVQTELSQITKAIEESELKRLGKDGQRRPNYRMYMRR 231 (553)
Q Consensus 153 ~~li~-~i~~~~lpEsp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (553)
+.++. ++...+++|+|+.. .++... ........... +. .......+++
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~-----~~~~~~-----~~~~~~~~~~~------~~---------------~~~~~~~~~~ 224 (366)
T TIGR00886 176 ILLLPALLIFFVGADTPPGK-----PATGKL-----SFKGARWSVGT------GA---------------LGDQLKVFRD 224 (366)
T ss_pred HHHHHHHHHHHhcccCCccc-----ccchhc-----ccccccccccc------hh---------------HHHHHHHHhc
Confidence 44443 34444567665311 000000 00000000000 00 0011111222
Q ss_pred cchhHHHHHHHHHHHHhhhhhHHHHhhHHHHHHh-hCCCCC-hHHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhH
Q psy15864 232 TFLLPYAIVTSLFFIGQFGGMTTLQTYAVGIFES-IHAPLD-PYFATLLLGVAELGGALLCVVLIHYTGKRPLALISTGG 309 (553)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~-~~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~ 309 (553)
+..+ ...+..+........+..+.|.++++ .+.+.. ......+..++.+++.+++|+++||+|||+.+..+...
T Consensus 225 ~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~ 300 (366)
T TIGR00886 225 RHTW----ILALLYSVTFGSFLGVSSIFAMFFKDQFGLSKVTAGAYASLGGLLGSLARPLGGAISDRLGGARKLLMSFLG 300 (366)
T ss_pred cchh----hHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHhhccchhHHHHHHH
Confidence 2111 11222222233334455566666644 465443 33556667788899999999999999999877766655
Q ss_pred HHHHHHHHHHHHHhhcccCCC-CChhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHH
Q psy15864 310 SAACFIVVAVYAQFHLSYGWD-SPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIF 381 (553)
Q Consensus 310 ~~i~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~ 381 (553)
.+++.+++.+... .. +.+..++...+..++.+.+.... +.+++++.| +.+|+++|+.+.++.+|
T Consensus 301 ~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~-~~~g~~~g~~~~~~~~g 365 (366)
T TIGR00886 301 VAMGAFLVVLGLV------SPLSLAVFIVLFVALFFFSGAGNGST-FALVPHIFR-RATGAVSGLVGAIGNLG 365 (366)
T ss_pred HHHHHHHHHhcCC------CcchHHHHHHHHHHHHHHhccccchh-hhcchhhch-hhcccHHHHHHHhccCC
Confidence 5555444433210 11 33333344444445555544443 577888887 58899999888777654
No 94
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.49 E-value=3.1e-13 Score=138.44 Aligned_cols=181 Identities=12% Similarity=-0.029 Sum_probs=141.9
Q ss_pred hHHHHHHHHHHHHhhhhhHHHHhhHHHHHHhhCCCCCh-HHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHH
Q psy15864 235 LPYAIVTSLFFIGQFGGMTTLQTYAVGIFESIHAPLDP-YFATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAAC 313 (553)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~ 313 (553)
++.++..++.++..+.....+.+..|.+.++.+.+... .+..++..++..++.++.|+++||+|||+++..++++..++
T Consensus 7 ~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~ 86 (412)
T TIGR02332 7 RRLIIFLFILFIFSFLDRINIGFAGLTMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWIAGIMVLWGIA 86 (412)
T ss_pred hHHHHHHHHHHHHHHhhhhhHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHHHHHHHH
Confidence 34455555555666666667777777777777766443 47777888999999999999999999999999998888888
Q ss_pred HHHHHHHHHhhcccCCCCChhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhHHHH
Q psy15864 314 FIVVAVYAQFHLSYGWDSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYYPML 393 (553)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~ 393 (553)
.++.++ .++.+.+++.+++.|++.+... +....+++|.+|++.|++++++.+....++..+++.+.+++.
T Consensus 87 ~~~~~~---------~~~~~~l~~~r~l~G~~~~~~~-~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~ 156 (412)
T TIGR02332 87 STATMF---------ATGPESLYLLRILVGIAEAGFL-PGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYIL 156 (412)
T ss_pred HHHHHH---------hcCHHHHHHHHHHHHHHHhhHH-HHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888776 5677888889999998877654 444478899999999999999999999999999998888776
Q ss_pred h------hccchhhHHHHHHHHHHHHhhheEEcccCCC
Q psy15864 394 D------TFHLWGTLYFYAAISVVGTLYMYFVMPETEG 425 (553)
Q Consensus 394 ~------~~g~~~~~~~~~~~~~~~~~~~~~~~pet~~ 425 (553)
. ..+|.+.+.+.++..++..++.++++||++.
T Consensus 157 ~~~~~~~~~gwr~~f~~~~~~~l~~~~~~~~~~~~~p~ 194 (412)
T TIGR02332 157 ALDGLMALKGWQWLFLLEGFPSVILGVMTWFWLDDSPD 194 (412)
T ss_pred hCCCCCCccchhHHHHHHHHHHHHHHHHHhhccCCCcc
Confidence 4 3577777777677766666677778888864
No 95
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.47 E-value=1.1e-12 Score=133.81 Aligned_cols=251 Identities=15% Similarity=0.089 Sum_probs=145.2
Q ss_pred ccccccccccc--chhhhhhhhhccCcccccchhchhhhhHHHHHHHHHhhcccc----chHHHHHHHHHHHHHHHH-Hh
Q psy15864 89 KGTFLYKMAAP--LVLVLTYVAEITQPHLRGMLSATASMTTIFGTVSQLFLGSFL----HWRSAAILNLLFPILALC-AL 161 (553)
Q Consensus 89 ~gr~~~G~ga~--~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~lG~~l~~~l~~~l----gWr~~f~i~~i~~li~~i-~~ 161 (553)
-.|++.|++.+ .+....++.|.+++++|+.+.+++.++..+|.++++++++.+ +||+.|++.++++++..+ ..
T Consensus 101 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~ 180 (394)
T PRK11652 101 AASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTLFGWRACYLFLLLLGAGVTFSMA 180 (394)
T ss_pred HHHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHHHH
Confidence 35778887654 345557788999999999999999999998888888777654 899999998887766543 44
Q ss_pred ccccCCceeeeecCChHHHHHHHHHHcCCCCCcchHHHHHHHHHHHHHHHHHhcCCCCCCChhhhhhhhhcchhHHHHHH
Q psy15864 162 YFIPESPHWLISQGRMQEASASLCWLRGWVTPDKVQTELSQITKAIEESELKRLGKDGQRRPNYRMYMRRTFLLPYAIVT 241 (553)
Q Consensus 162 ~~lpEsp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (553)
+++||++... .+..+ .. ..++...+++..+..++..
T Consensus 181 ~~~~~~~~~~---~~~~~-----------------------~~------------------~~~~~~~~~~~~~~~~~~~ 216 (394)
T PRK11652 181 RWMPETRPAD---ARRTR-----------------------VL------------------ASYRTLLSNRRFNCYLLML 216 (394)
T ss_pred HhCCccCccc---cchhH-----------------------HH------------------HHHHHHHcChHHHHHHHHH
Confidence 5578865321 00000 00 0111122222222222211
Q ss_pred HHHHHHhhhhhHHHHhhHHHHHHh-hCCCCCh-HHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHHHHHH
Q psy15864 242 SLFFIGQFGGMTTLQTYAVGIFES-IHAPLDP-YFATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAACFIVVAV 319 (553)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~-~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~ 319 (553)
+ ..+.+...+..+.+.++.+ .+.+... .+......++.++++++.+++.||++++.. .....+.++.+++..
T Consensus 217 ~----~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~~ 290 (394)
T PRK11652 217 I----GTLAGIAVFEACSGVLMGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKRFSTLMW--QSVICCLLAGLLMWI 290 (394)
T ss_pred H----HHHHHHHHHHHhChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHH
Confidence 1 1122222333334444444 4554322 344455667778888888888888873222 222222222222221
Q ss_pred HHHhhcccCCCCChhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhHHHHhh
Q psy15864 320 YAQFHLSYGWDSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYYPMLDT 395 (553)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~~ 395 (553)
.... ...+.+..++..++.+++.+...... ..+..|.+| +.+|++.++.+....+++.+++.+.+.+...
T Consensus 291 ~~~~----~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~-~~~g~~~~~~~~~~~lg~~~~~~~~~~~~~~ 360 (394)
T PRK11652 291 PGWF----GVMNVWTLLVPAALFFFGAGMLFPLA-TSGAMEPFP-YLAGTAGALLGGLQNIGSGLAALLSAMLPQT 360 (394)
T ss_pred HHHh----ccccHHHHHHHHHHHHHHHHHHHHHH-HHHHHhhcc-ccchHHHHHHHHHHHHHHHHHHHHHHHccCC
Confidence 1110 01233445555566666665544333 477778887 5679999999988899999999888776543
No 96
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.45 E-value=7.2e-13 Score=136.84 Aligned_cols=177 Identities=9% Similarity=0.016 Sum_probs=134.6
Q ss_pred HHHHHHHHHHHhhhhhHHHHhhHHHHHHhhCCCCCh-HHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHH
Q psy15864 237 YAIVTSLFFIGQFGGMTTLQTYAVGIFESIHAPLDP-YFATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAACFI 315 (553)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~ 315 (553)
.++..++.++..+.....+..++|.+.++.+.+... .+...+..++.+++.++.|+++||+|||+++.++.++.+++.+
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~ 103 (434)
T PRK11663 24 ILITMYLGYALFYFTRKSFNAAMPEMLADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIATGIINI 103 (434)
T ss_pred HHHHHHHHHHHHHHhhhhHHHhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHHHHHHH
Confidence 334444444444444556667788888888776433 4677788899999999999999999999999998888888887
Q ss_pred HHHHHHHhhcccCCCCChhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhHHHHhh
Q psy15864 316 VVAVYAQFHLSYGWDSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYYPMLDT 395 (553)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~~ 395 (553)
++.+ ..+.+.+++.+++.+++.+..+.+. ..++++.+|++.|++++++.+....+++.+++.+.+.+.+.
T Consensus 104 ~~~~---------~~~~~~l~~~~~l~g~~~g~~~~~~-~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~ 173 (434)
T PRK11663 104 LFGF---------SSSLWAFALLWVLNAFFQGWGWPVC-AKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIALH 173 (434)
T ss_pred HHHH---------HhHHHHHHHHHHHHHHHHHccchHH-HHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 7665 4456666777777777776655444 48889999999999999999999999999999999998888
Q ss_pred ccchhhHHHHHHHHHHHHhhheEEcccC
Q psy15864 396 FHLWGTLYFYAAISVVGTLYMYFVMPET 423 (553)
Q Consensus 396 ~g~~~~~~~~~~~~~~~~~~~~~~~pet 423 (553)
.+|.+.+.+.+++.++..++.++++||+
T Consensus 174 ~gw~~~f~~~~i~~~~~~~~~~~~~~~~ 201 (434)
T PRK11663 174 YGWRYGMMIAGIIAIVVGLFLCWRLRDK 201 (434)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 8877777776666555555444556664
No 97
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.45 E-value=1e-12 Score=128.73 Aligned_cols=173 Identities=14% Similarity=0.003 Sum_probs=151.8
Q ss_pred HHHHHHHHHhhhhhHHHHhhHHHHHHhhCCCCC-hHHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHHHH
Q psy15864 239 IVTSLFFIGQFGGMTTLQTYAVGIFESIHAPLD-PYFATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAACFIVV 317 (553)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~ 317 (553)
+...+..|.....-+.....+|.+-++.+.+.. ..+..++++++..+++++...+.+|+.||++++..+.+++++.++.
T Consensus 16 ~aLa~~~F~igttEfv~~gLLp~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~lFi~~n~l~ 95 (394)
T COG2814 16 LALALAAFAIGTTEFVPVGLLPPIAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRLERRRLLLGLLALFIVSNLLS 95 (394)
T ss_pred HHHHHHHHHHHhHHHHHHhchHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHH
Confidence 344444555555566677788888888887754 3588889999999999999999999999999999999999999999
Q ss_pred HHHHHhhcccCCCCChhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhHHHHhhcc
Q psy15864 318 AVYAQFHLSYGWDSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYYPMLDTFH 397 (553)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~~~g 397 (553)
++ +++.+++++.|++.++..|..+... .++.+++.|++.|++++++......+...++.++..++-+.+|
T Consensus 96 al---------Ap~f~~Ll~aR~~~g~a~G~f~~i~-~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~G 165 (394)
T COG2814 96 AL---------APSFAVLLLARALAGLAHGVFWSIA-AALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQLFG 165 (394)
T ss_pred HH---------hccHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHHHHhh
Confidence 98 7889999999999999988777555 5999999999999999999999999999999999999999999
Q ss_pred chhhHHHHHHHHHHHHhhheEEcc
Q psy15864 398 LWGTLYFYAAISVVGTLYMYFVMP 421 (553)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~p 421 (553)
|+..|++.+++.++..+..+..+|
T Consensus 166 WR~~F~~ia~l~ll~~~~~~~~lP 189 (394)
T COG2814 166 WRATFLAIAVLALLALLLLWKLLP 189 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCC
Confidence 999999999999999999999999
No 98
>KOG2504|consensus
Probab=99.44 E-value=5.6e-14 Score=145.23 Aligned_cols=313 Identities=13% Similarity=0.084 Sum_probs=188.3
Q ss_pred ccccccccchhhh--hhhhhccCcccccchhchhhhhHHHHHHHHHhhcccc----chHHHHHHHHHHHHHHHHHhccc-
Q psy15864 92 FLYKMAAPLVLVL--TYVAEITQPHLRGMLSATASMTTIFGTVSQLFLGSFL----HWRSAAILNLLFPILALCALYFI- 164 (553)
Q Consensus 92 ~~~G~ga~~~~~~--~~i~e~~p~~~Rg~~~~~~~~~~~lG~~l~~~l~~~l----gWr~~f~i~~i~~li~~i~~~~l- 164 (553)
++.|+|.++...+ +++. .+..++|+.+.|+...+.++|.++-+.+...+ |||+.+++.+.+.+-+++....+
T Consensus 143 vi~G~G~~~~~~paiviv~-~YF~kkR~lA~Gia~~GsG~G~~~~~~l~~~l~~~~G~r~~~l~~~~~~l~~~~~~~~~r 221 (509)
T KOG2504|consen 143 VIGGLGLGLIYLPAVVILG-TYFEKKRALATGIAVSGTGVGTVVFPPLLKYLLSKYGWRGALLIFGGISLNVLVAGALLR 221 (509)
T ss_pred HHhhccchhhhcchhhhhh-hHhHHHHHHHHhhhhccCCcceeeHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcC
Confidence 3455555544333 3444 45568899999999999999999988877766 99999999888886665554443
Q ss_pred cCCceeeeecCChHHHHHHHHHH--------cCCC---CCcchHHHHHHHHHHHHHHHHHhcCCCCCCChhhhhhhhhcc
Q psy15864 165 PESPHWLISQGRMQEASASLCWL--------RGWV---TPDKVQTELSQITKAIEESELKRLGKDGQRRPNYRMYMRRTF 233 (553)
Q Consensus 165 pEsp~~l~~~~~~~~a~~~l~~~--------~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (553)
|.+++.. +. .++..+..... .... +..... .......... .................+-...+
T Consensus 222 p~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~~~~~~~d~~ll 295 (509)
T KOG2504|consen 222 PLSPPKK--PN-EEKDLRNSAASVESTPKPVELRISERDSGLKK-LSLSNLATLK--RGPDKWRNSPLQAFLSMLDLSLL 295 (509)
T ss_pred CCCcCCC--ch-hhhhhccccccccccccccccccccCCCCCCc-ccccchhhhh--hCCccccccchhhhhhhhhHHHH
Confidence 3232210 00 00000000000 0000 000000 0000000000 00000000000111110011222
Q ss_pred hhHHHHHHHHHHHHhhhhhHHHHhhHHHHHHhhCCCCC-hHHHHHHHHHHHHHHHHHHhhhhcccCCcc--eeecchhHH
Q psy15864 234 LLPYAIVTSLFFIGQFGGMTTLQTYAVGIFESIHAPLD-PYFATLLLGVAELGGALLCVVLIHYTGKRP--LALISTGGS 310 (553)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~i~~~~g~~~~g~l~dr~Grr~--~l~~~~~~~ 310 (553)
+.+.++...+.......++.....++|.+....+++.+ .+...++.++..++|.++.|+++|+...++ +..++.++.
T Consensus 296 ~~~~fl~~~~~~~~~~~g~~~p~~~l~~~~~~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~~~ll~~ 375 (509)
T KOG2504|consen 296 KDPKFLLLALSNLFAYLGFNVPFVYLPSYAKSLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRALVLFLLTLLIA 375 (509)
T ss_pred cCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchHHHHHHHHHHH
Confidence 33445555666666667777778888888887787654 457788899999999999999999988433 333444444
Q ss_pred HHHHHHHHHHHHhhcccCCCCChhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhH
Q psy15864 311 AACFIVVAVYAQFHLSYGWDSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYY 390 (553)
Q Consensus 311 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~ 390 (553)
+++.+.+.+ ..+.+.++....++|++.+... .+....+.|+.+.+.-..+.|+...+..++..++|++.+
T Consensus 376 gl~~~~~p~---------~~~~~~l~~~~~~fG~~~g~~~-~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag 445 (509)
T KOG2504|consen 376 GLARLFLPF---------ATTYVGLIVFSILFGFCVGSFS-SLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAG 445 (509)
T ss_pred HHHHHHHHH---------hccHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCcccce
Confidence 444433333 4556667777777777665444 444467889999999899999999999999999999999
Q ss_pred HHHhhccchhhHHHHHHHHHHHHhhheEEcc
Q psy15864 391 PMLDTFHLWGTLYFYAAISVVGTLYMYFVMP 421 (553)
Q Consensus 391 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p 421 (553)
.+.+..+.+...+.++.++.++..+.++..|
T Consensus 446 ~~~d~tg~Y~~~f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 446 LLYDITGNYDHAFYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred eeeeccCCeeeehhhcChHHHHHHHHHHHhH
Confidence 9888888666666666666666666666666
No 99
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.43 E-value=1.1e-11 Score=127.99 Aligned_cols=241 Identities=18% Similarity=0.168 Sum_probs=161.3
Q ss_pred hhhhhccC-cccccchhchhhhhHHHHHHHHHhhcccc-----------chHHHHHHHHHHHHHHHHHhcc-ccCCceee
Q psy15864 105 TYVAEITQ-PHLRGMLSATASMTTIFGTVSQLFLGSFL-----------HWRSAAILNLLFPILALCALYF-IPESPHWL 171 (553)
Q Consensus 105 ~~i~e~~p-~~~Rg~~~~~~~~~~~lG~~l~~~l~~~l-----------gWr~~f~i~~i~~li~~i~~~~-lpEsp~~l 171 (553)
+++.|+++ +++|.+..++-..+..+|.++...+...+ +|++..++.++++++..++.++ ++|.++-
T Consensus 126 al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~~v~~iv~~v~~~i~~~~~ke~~~~- 204 (428)
T PF13347_consen 126 ALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTSNGYRWMALVLAIVGLVFFLITFFFVKERSVE- 204 (428)
T ss_pred hcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccchHHHHHHHHHHHHHHHHhhhhhheeeecccc-
Confidence 67888887 57899999999888888886554443322 5999999998888887655544 7772110
Q ss_pred eecCChHHHHHHHHHHcCCCCCcchHHHHHHHHHHHHHHHHHhcCCCCCCChhhhhhhhhcchhHHHHHHHHHHHHhhhh
Q psy15864 172 ISQGRMQEASASLCWLRGWVTPDKVQTELSQITKAIEESELKRLGKDGQRRPNYRMYMRRTFLLPYAIVTSLFFIGQFGG 251 (553)
Q Consensus 172 ~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (553)
.++. .........++.+++++....+++..++..+.....
T Consensus 205 -----~~~~-----------------------------------~~~~~~~~~~~~~~~nr~~~~l~~~~~~~~~~~~~~ 244 (428)
T PF13347_consen 205 -----VTEQ-----------------------------------EKKISLRDSLRSLFRNRPFRILLLAFFLQWLAFALM 244 (428)
T ss_pred -----cccc-----------------------------------ccccccccchhhhcccchHHHHHHHHHHHHhhhhhh
Confidence 0000 000111223344444444444444444433333333
Q ss_pred hHHHHhhHHHHHHhhCCCCChHHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHHHHHHHHHhhcccCCCC
Q psy15864 252 MTTLQTYAVGIFESIHAPLDPYFATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAACFIVVAVYAQFHLSYGWDS 331 (553)
Q Consensus 252 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 331 (553)
.....+|.... .+.+........+..++.+++.++.++++||+|+|+++..+.++.+++.+++.+.. ..+
T Consensus 245 ~~~~~y~~~~v---l~~~~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~-------~~~ 314 (428)
T PF13347_consen 245 NTFLPYYFTYV---LGNEGLISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLLLAALGFLLLFFLG-------PGS 314 (428)
T ss_pred hhHHHHHHHHH---hcCchhhHHHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHHHHHHHHHHHHHHH-------hhh
Confidence 33333333333 23333344566677888999999999999999999999999999988888777643 246
Q ss_pred ChhHHHHHHHHHHHHhhhhccccceeecccccc-------chhhhhhhHHHHHHHHHHHHHHHHhHHHHhhcc
Q psy15864 332 PLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPN-------NIRATASGASGSSSYIFAFAVNKLYYPMLDTFH 397 (553)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~-------~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~~~g 397 (553)
.+..++...+.+++.+..+ .+++++++|+.+. +..|...|+..+...++..+++.+.+.+++..|
T Consensus 315 ~~~~~i~~~l~gi~~~~~~-~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~~l~~~G 386 (428)
T PF13347_consen 315 PWLVLILFILAGIGYGAFF-VIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVGLLLALVG 386 (428)
T ss_pred HHHHHHHHHHhHhhhcccc-cccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHHHHHHHhC
Confidence 7777777888888776665 5667999999873 345788899999999999999999888876544
No 100
>PRK03545 putative arabinose transporter; Provisional
Probab=99.42 E-value=2.1e-12 Score=131.50 Aligned_cols=161 Identities=14% Similarity=-0.023 Sum_probs=127.4
Q ss_pred HHHhhHHHHHHhhCCCCCh-HHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHHHHHHHHHhhcccCCCCC
Q psy15864 254 TLQTYAVGIFESIHAPLDP-YFATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAACFIVVAVYAQFHLSYGWDSP 332 (553)
Q Consensus 254 ~~~~~~~~~~~~~g~~~~~-~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 332 (553)
.....+|.+.++.+.+... .+......++..++.++.|+++||+|||+++.++.++.+++.++..+ .++.
T Consensus 27 ~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~---------~~~~ 97 (390)
T PRK03545 27 VPVGLLSDIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVLFIASHVLSAL---------AWNF 97 (390)
T ss_pred HHHcchHHHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHH---------hccH
Confidence 3444567777777776443 46666777888889999999999999999999998888888877766 5677
Q ss_pred hhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhHHHHhhccchhhHHHHHHHHHHH
Q psy15864 333 LVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYYPMLDTFHLWGTLYFYAAISVVG 412 (553)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 412 (553)
+.+++.+++.+++.+... +...+++.+.+|++.|+.++|+......++..++|++.+.+.+..+|.+.+++.++++++.
T Consensus 98 ~~l~~~r~~~G~~~~~~~-~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~l~ 176 (390)
T PRK03545 98 TVLLISRIGIAFAHAIFW-SITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQYLGWRTTFLAIGGGALIT 176 (390)
T ss_pred HHHHHHHHHHHHHHHHHH-HHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHhcHHHHHHHHHHHHHHH
Confidence 888888888877665443 4444788999999999999999999999999999999998888888888888877777766
Q ss_pred HhhheEEcccCC
Q psy15864 413 TLYMYFVMPETE 424 (553)
Q Consensus 413 ~~~~~~~~pet~ 424 (553)
.++.+.++|+.+
T Consensus 177 ~~~~~~~~~~~~ 188 (390)
T PRK03545 177 LLLLIKLLPLLP 188 (390)
T ss_pred HHHHHHhCCCCC
Confidence 666555667653
No 101
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.42 E-value=1.2e-11 Score=128.77 Aligned_cols=292 Identities=10% Similarity=-0.051 Sum_probs=150.5
Q ss_pred ccccccccccc--chhhhhhhhhccCcc--cccchhchhhhhHHHHHHHHHhhcccc----chHHHHHHHHHHHHHHHHH
Q psy15864 89 KGTFLYKMAAP--LVLVLTYVAEITQPH--LRGMLSATASMTTIFGTVSQLFLGSFL----HWRSAAILNLLFPILALCA 160 (553)
Q Consensus 89 ~gr~~~G~ga~--~~~~~~~i~e~~p~~--~Rg~~~~~~~~~~~lG~~l~~~l~~~l----gWr~~f~i~~i~~li~~i~ 160 (553)
-+|+++|+|.+ .+...++++|++|++ +|+.+.+++.++.++|.++++.+++++ |||+.|++.++..++.++.
T Consensus 110 ~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~~~gw~~~F~i~~i~~~~~~~~ 189 (489)
T PRK10207 110 IALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIADKFGYSVTYNLCGAGLIIALLV 189 (489)
T ss_pred HHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHH
Confidence 46788888765 456789999999887 558889999999999998888877765 9999999975533333333
Q ss_pred hccccCCceee--eecC-ChHHHHHHHH---------HHcCCCCCcchHHHHHHHHHHHHHHH-HHhcCCCCCCChhhhh
Q psy15864 161 LYFIPESPHWL--ISQG-RMQEASASLC---------WLRGWVTPDKVQTELSQITKAIEESE-LKRLGKDGQRRPNYRM 227 (553)
Q Consensus 161 ~~~lpEsp~~l--~~~~-~~~~a~~~l~---------~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 227 (553)
+++.++..+-. ..++ +.+.....+. .+....+................... ...... . ..
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~f~~~~~~-~------~~ 262 (489)
T PRK10207 190 YFACRGMVKDIGSEPDHKPMSFSKLLLVLLGSVVMIFVCAWLMHNVEVANLVLIVLSIVVTIIFFREAFK-L------DK 262 (489)
T ss_pred HHHcchhhcccCCCCCccchhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhc-C------CH
Confidence 33332111100 0001 0111000000 00000000000000000000000000 000000 0 01
Q ss_pred hhhhcchhHHHHHHH--HHHHHhhhhhHHHHhhHHHHHHh------hCCCCChHHHHHHHHHHHHHHHHHHhhhhcccCC
Q psy15864 228 YMRRTFLLPYAIVTS--LFFIGQFGGMTTLQTYAVGIFES------IHAPLDPYFATLLLGVAELGGALLCVVLIHYTGK 299 (553)
Q Consensus 228 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~------~g~~~~~~~~~~~~~i~~~~g~~~~g~l~dr~Gr 299 (553)
..++ +.+..+. +.....+..+....+.++.+.+. .|+.....+...+..+..++.+++.+++.||+++
T Consensus 263 ~~r~----r~~~~~~l~~~~~~f~~~~~q~~~~l~l~~~~~~~~~~~G~~i~~~~~~~~n~~~iii~~pl~~~l~~rl~~ 338 (489)
T PRK10207 263 TGRN----KMFVAFVLMLEAVVFYILYAQMPTSLNFFAINNVHHEILGFSINPVSFQALNPFWVVVASPILAGIYTHLGS 338 (489)
T ss_pred HHHH----HHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHhccccccceEECHHHHHhHhHHHHHHHHHHHHHHHHHHhh
Confidence 1111 1111111 11111112222222223333321 1222234455555666777788888999999999
Q ss_pred cce-------eecchhHHHHHHHHHHHHHH-hhcccCCCCChhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhh
Q psy15864 300 RPL-------ALISTGGSAACFIVVAVYAQ-FHLSYGWDSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATAS 371 (553)
Q Consensus 300 r~~-------l~~~~~~~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~ 371 (553)
|+. +.+++++.+++.+.++.... ....+...+.++++...++.+++.+... +....++....|++.+|.++
T Consensus 339 r~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g~Ge~~~~-~~g~~~~~~~aP~~~~g~~~ 417 (489)
T PRK10207 339 KGKDLSMPMKFTLGMFLCSLGFLTAAAAGMWFADAQGLTSPWFIVLVYLFQSLGELFIS-ALGLAMIAALVPQHLMGFIL 417 (489)
T ss_pred CCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHHh-HHHHHHHHHhChHHHHHHHH
Confidence 874 55666666666554432111 1111112345556666667777665554 44458888999999999999
Q ss_pred hHHHHHHHHHHHHHHHHhHHH
Q psy15864 372 GASGSSSYIFAFAVNKLYYPM 392 (553)
Q Consensus 372 ~~~~~~~~~~~~i~~~~~~~~ 392 (553)
|+.+....+++.++..+....
T Consensus 418 g~~~l~~~ig~~lg~~l~~~~ 438 (489)
T PRK10207 418 GMWFLTQAAAFLLGGYVATFT 438 (489)
T ss_pred HHHHHHHHHHHHHHHHHHHHh
Confidence 999999999988887776543
No 102
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.41 E-value=9.6e-12 Score=128.98 Aligned_cols=295 Identities=16% Similarity=0.132 Sum_probs=155.1
Q ss_pred ccccccccccccccch-hhhhhhhhccCcccccchhchhhhhHHHHHHHHHhhcccc----chHHHHHHHHHHHHHHHHH
Q psy15864 86 NEEKGTFLYKMAAPLV-LVLTYVAEITQPHLRGMLSATASMTTIFGTVSQLFLGSFL----HWRSAAILNLLFPILALCA 160 (553)
Q Consensus 86 ~~~~gr~~~G~ga~~~-~~~~~i~e~~p~~~Rg~~~~~~~~~~~lG~~l~~~l~~~l----gWr~~f~i~~i~~li~~i~ 160 (553)
.--.|..+.|+|++.. +....++|..|.+.|+...++......+....++.++..+ +|||.|++.+++..+.+++
T Consensus 133 ~~iag~~l~GvgaG~~~~~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~WRw~~~~~~i~~~i~~vl 212 (599)
T PF06609_consen 133 TFIAGMVLYGVGAGVQELAALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAAHSGWRWIFYIFIIWSGIALVL 212 (599)
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhccCCCcchHHHHHHHHHHHHHHH
Confidence 4555677777876643 3445689999999998877766655544443444444333 8999999999887776544
Q ss_pred hcc--ccCCceeeeecCC---hHHHHHHHHHH------------------cCCC-CCcchHHHHHHHHHHHHHHHHHhcC
Q psy15864 161 LYF--IPESPHWLISQGR---MQEASASLCWL------------------RGWV-TPDKVQTELSQITKAIEESELKRLG 216 (553)
Q Consensus 161 ~~~--lpEsp~~l~~~~~---~~~a~~~l~~~------------------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (553)
.++ .|.+ +-..+++ ..+....+..+ .+.. .++.....+..+.-..-.-......
T Consensus 213 ~~~fY~PP~--~~~~~~~~~s~~~~l~~lD~IG~~L~~~Gl~LfLlgl~wgG~~~~~W~Sa~VIa~lviG~~~Lv~F~~w 290 (599)
T PF06609_consen 213 IFFFYFPPP--RAQLHGRKLSKREQLKELDWIGIFLFIAGLALFLLGLSWGGYPYYPWKSAHVIAPLVIGFVLLVAFVVW 290 (599)
T ss_pred HHHHhCCCc--hhhhccccCcHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCCccchhhHHHHHHHHHHHHHh
Confidence 433 3432 2111111 11211112211 1111 1111111111111110000000000
Q ss_pred C---CCCCChhhhhhhhhcchhHHHHHHHHHHHHhhhhhHHHHhhHHHHHH-hhCCCC----ChHHHHHHHHHHHHHHHH
Q psy15864 217 K---DGQRRPNYRMYMRRTFLLPYAIVTSLFFIGQFGGMTTLQTYAVGIFE-SIHAPL----DPYFATLLLGVAELGGAL 288 (553)
Q Consensus 217 ~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~----~~~~~~~~~~i~~~~g~~ 288 (553)
+ ..........+++.+ |.+.+.++..+.....++....+.|.... .++.+. ...+.....+++.++|++
T Consensus 291 E~~~~~~~Pl~P~~Lf~~~---r~~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~~~fg~~~g~~ 367 (599)
T PF06609_consen 291 EWFGAPKDPLFPHRLFKDR---RGFAALLVISFISGMNFFSVNILWPQQVVNVFGSDPISITEIGWISSPVGFGSCAGAV 367 (599)
T ss_pred hhhccCCCCcCCHHHhccc---hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccceeehhhhhHHHHHHHHHH
Confidence 0 001111111233221 22222222222333333444444444433 333322 234666777888889999
Q ss_pred HHhhhhcccCCc-ceeecchhHHHHHHHHHHHHHHhhcccCCCCChhHHHHHHHHHHHHhhhhccccceeeccccccchh
Q psy15864 289 LCVVLIHYTGKR-PLALISTGGSAACFIVVAVYAQFHLSYGWDSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIR 367 (553)
Q Consensus 289 ~~g~l~dr~Grr-~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R 367 (553)
+.|.+..+++|- +.++++.+++.+++.+++... ..+....+...++.+++.+....+.. +.+.-+.|++.-
T Consensus 368 i~g~l~~~ir~~Kw~li~~~~~~ta~~Gama~~~-------~~n~~~~i~~~~l~g~giG~~~~~~~-~~~ql~~p~~~i 439 (599)
T PF06609_consen 368 ILGLLFSKIRHIKWQLIFGSVLMTAFCGAMAAVR-------PDNKNAAIAFLVLAGFGIGGILVPAI-VIAQLIVPDEDI 439 (599)
T ss_pred HHHHHHHHccchhHHHHHHHHHHHHHHHHHHHcc-------CCCcchHHHHHHHHHHhHHHHHHHHH-HeeEeeeCchHH
Confidence 999999988874 444566555554444433321 23334445556666776666655543 666667899999
Q ss_pred hhhhhHHHHHHHHHHHHHHHHhHHHH
Q psy15864 368 ATASGASGSSSYIFAFAVNKLYYPML 393 (553)
Q Consensus 368 g~~~~~~~~~~~~~~~i~~~~~~~~~ 393 (553)
|+++|+..+++.+|+.++..++..+.
T Consensus 440 g~a~gL~~s~R~~GGsIg~aIy~~I~ 465 (599)
T PF06609_consen 440 GTATGLTGSIRSIGGSIGYAIYNAIF 465 (599)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 99999999999999999988776544
No 103
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.41 E-value=1.7e-12 Score=131.87 Aligned_cols=170 Identities=16% Similarity=0.098 Sum_probs=131.9
Q ss_pred HHhhhhhHHHHhhHHHHHHhhCCCCC-hHHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHHHHHHHHHhh
Q psy15864 246 IGQFGGMTTLQTYAVGIFESIHAPLD-PYFATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAACFIVVAVYAQFH 324 (553)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~ 324 (553)
+....+........|.+.++.+.+.. ..+...+..++.+++.++.|+++||+|||+.+..+.++.+++.+++..
T Consensus 15 ~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~----- 89 (385)
T TIGR00710 15 ILGPLGIDMYLPAFPEIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLGLAL----- 89 (385)
T ss_pred HHHHHHHHHhcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHH-----
Confidence 33334445555566777777777643 346777888999999999999999999999999988888887777665
Q ss_pred cccCCCCChhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhHHHHhhccchhhHHH
Q psy15864 325 LSYGWDSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYYPMLDTFHLWGTLYF 404 (553)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~~~g~~~~~~~ 404 (553)
.++.+.+++.+++.+++.+...... .+++.|.+|++.|+++.++.+....++..+++.+.+.+.+..+|...+++
T Consensus 90 ----~~~~~~~~~~~~l~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~ 164 (385)
T TIGR00710 90 ----SNNIETLLVLRFVQAFGASAGSVIS-QALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWLSWHAIFAF 164 (385)
T ss_pred ----HccHHHHHHHHHHHHcchhHHHHHH-HHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHH
Confidence 4566677777888887766555444 48889999999999999999999999999999999988888887777777
Q ss_pred HHHHHHHHHhhheEEcccCCC
Q psy15864 405 YAAISVVGTLYMYFVMPETEG 425 (553)
Q Consensus 405 ~~~~~~~~~~~~~~~~pet~~ 425 (553)
.+++.++..++.+++.||++.
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~ 185 (385)
T TIGR00710 165 LSLAGILLSALIFFILPETLP 185 (385)
T ss_pred HHHHHHHHHHHHHHhCCCCCC
Confidence 777666666666667777644
No 104
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.40 E-value=2e-12 Score=135.83 Aligned_cols=179 Identities=14% Similarity=-0.002 Sum_probs=141.2
Q ss_pred HHHHHHHHHHHhhhhhHHHHhhHHHHHHhhCCCC-ChHHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHH
Q psy15864 237 YAIVTSLFFIGQFGGMTTLQTYAVGIFESIHAPL-DPYFATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAACFI 315 (553)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~ 315 (553)
.++..++..+........+...+|.+..+.+.+. +..|....+.++..++.++.|+++||+|||++++++.++++++.+
T Consensus 7 ~~~~~~~~~~~~~ld~tiv~~a~p~i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~~~~~~~~~ 86 (495)
T PRK14995 7 TLVIIVLVYIPVAIDATVLHVAAPTLSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGGTLFGLASL 86 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHH
Confidence 3444455555556666677777888888877654 456888888888889999999999999999999999999999988
Q ss_pred HHHHHHHhhcccCCCCChhHHHHHHHHHHHHhhhhccccceeeccc-cccchhhhhhhHHHHHHHHHHHHHHHHhHHHHh
Q psy15864 316 VVAVYAQFHLSYGWDSPLVPTVFLVLAAFLTHICIRLLPWMLIGEV-FPNNIRATASGASGSSSYIFAFAVNKLYYPMLD 394 (553)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~-~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~ 394 (553)
++++ .++.+.+++++++.|++.+...... ...+.+. .|++.|+++.|+......++..++|.+.+.+.+
T Consensus 87 ~~~~---------a~~~~~li~~r~l~G~g~~~~~~~~-~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~ 156 (495)
T PRK14995 87 AAAF---------SPTASWLIATRALLAIGAAMIVPAT-LAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLE 156 (495)
T ss_pred HHHH---------cCCHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 8876 6788888889998888776544333 3445455 478999999999999999999999999999999
Q ss_pred hccchhhHHHHHHHHHHHHhhheEEcccCCC
Q psy15864 395 TFHLWGTLYFYAAISVVGTLYMYFVMPETEG 425 (553)
Q Consensus 395 ~~g~~~~~~~~~~~~~~~~~~~~~~~pet~~ 425 (553)
..+|++.+++...+.++..++.++++|+...
T Consensus 157 ~~gwr~~f~i~~~~~~~~~~l~~~~l~~~~~ 187 (495)
T PRK14995 157 HFYWGSVFLINVPIVLVVMGLTARYVPRQAG 187 (495)
T ss_pred cCChHHHHHHHHHHHHHHHHHHHHhCCCCCC
Confidence 9998888887777777666666677787543
No 105
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.40 E-value=2.6e-12 Score=131.67 Aligned_cols=162 Identities=11% Similarity=0.031 Sum_probs=125.7
Q ss_pred HHHhhHHHHHHhhCCCCCh-HHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHHHHHHHHHhhcccCCCCC
Q psy15864 254 TLQTYAVGIFESIHAPLDP-YFATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAACFIVVAVYAQFHLSYGWDSP 332 (553)
Q Consensus 254 ~~~~~~~~~~~~~g~~~~~-~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 332 (553)
....-+|.+.++.+.+... .+...++.++.+++.++.|+++||+|||++++.+.++.+++.++... .++.
T Consensus 34 ~~~p~l~~i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~---------a~~~ 104 (413)
T PRK15403 34 LIQPGIINVVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAATLF---------TTSM 104 (413)
T ss_pred hhccCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHHHHH---------cCCH
Confidence 3334444555566655333 36677788999999999999999999999999998888888777766 6677
Q ss_pred hhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhHHHHhhccchhhHHHHHHHHHHH
Q psy15864 333 LVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYYPMLDTFHLWGTLYFYAAISVVG 412 (553)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 412 (553)
+.+++++++.|++.+.. .+..++++.|.+|++.|++++++......++..++|.+.+.+.+..+|.+.+++.+++.++.
T Consensus 105 ~~l~~~r~l~Gi~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~~~f~~~~~~~~i~ 183 (413)
T PRK15403 105 TQFLIARFIQGTSICFI-ATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFVHWKVLFAIIAVMGLIA 183 (413)
T ss_pred HHHHHHHHHHHHHHHHH-HHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Confidence 78888899988876543 34445788899999999999999999999999999988888888778877787777766666
Q ss_pred HhhheEEcccCCC
Q psy15864 413 TLYMYFVMPETEG 425 (553)
Q Consensus 413 ~~~~~~~~pet~~ 425 (553)
.++.++++||++.
T Consensus 184 ~~~~~~~lp~~~~ 196 (413)
T PRK15403 184 FVGLLLAMPETVK 196 (413)
T ss_pred HHHHHHhCCCCcc
Confidence 6655667888753
No 106
>TIGR00895 2A0115 benzoate transport.
Probab=99.40 E-value=1e-12 Score=133.96 Aligned_cols=178 Identities=17% Similarity=0.016 Sum_probs=134.6
Q ss_pred HHHHHHHHHHHhhhhhHHHHhhHHHHHHhhCCCCC-hHHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHH
Q psy15864 237 YAIVTSLFFIGQFGGMTTLQTYAVGIFESIHAPLD-PYFATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAACFI 315 (553)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~ 315 (553)
.++..++..+..........++.|.+.+..+.+.. ..+...+..++.+++.++.|+++||+|||+++.++.++.+++.+
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~ 97 (398)
T TIGR00895 18 AIILSFLIMLMDGYDLAAMGFAAPAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSILLFSVFTL 97 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHHHHHHHH
Confidence 33334444444444455666777888777776543 34666677788999999999999999999999988888777777
Q ss_pred HHHHHHHhhcccCCCCChhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhHHHHhh
Q psy15864 316 VVAVYAQFHLSYGWDSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYYPMLDT 395 (553)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~~ 395 (553)
++.+ ..+.+.+++.+++.+++.+..... ..++++|.+|++.|+++.++......++..+++.+.+.+.+.
T Consensus 98 ~~~~---------~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~ 167 (398)
T TIGR00895 98 LCAL---------ATNVTQLLILRFLAGLGLGGLMPN-LNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPV 167 (398)
T ss_pred HHHH---------ccchHHHHHHHHHHhcccccchhh-HHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhhc
Confidence 6665 456677777778877776555544 458999999999999999999999999999999999998888
Q ss_pred ccchhhHHHHHHHHHHHHhhheEEcccCC
Q psy15864 396 FHLWGTLYFYAAISVVGTLYMYFVMPETE 424 (553)
Q Consensus 396 ~g~~~~~~~~~~~~~~~~~~~~~~~pet~ 424 (553)
.+|...+.+.+++.++..++.++++||+.
T Consensus 168 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (398)
T TIGR00895 168 FGWRSLFYVGGIAPLLLLLLLMRFLPESI 196 (398)
T ss_pred ccceeehhhhhhHHHHHHHHHHHhCCCCC
Confidence 88777777666666666666667778764
No 107
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.39 E-value=5.3e-12 Score=132.92 Aligned_cols=146 Identities=14% Similarity=0.062 Sum_probs=110.4
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHHHHHHHHHhhcccCCCCChhHHHHHHHHHHHHhhhhcc
Q psy15864 273 YFATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAACFIVVAVYAQFHLSYGWDSPLVPTVFLVLAAFLTHICIRL 352 (553)
Q Consensus 273 ~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (553)
.+......++.+++++++|+++||+|||+++.+++++.+++.++.++... .....+.+.+++++++.|++.+....+
T Consensus 59 ~~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~~~~~~~~~v~~~~~~~~~~---~~~~~~~~~~~~~r~l~G~~~g~~~~~ 135 (502)
T TIGR00887 59 AAVNGSASIGTLAGQLFFGWLADKLGRKRVYGMELIIMIIATVASGLSPG---SSPKSVMATLCFWRFWLGVGIGGDYPL 135 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHccC---cccchHHHHHHHHHHHHHHHHhhhhHH
Confidence 36677788999999999999999999999999988888888776665210 000001356788899999888777655
Q ss_pred ccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhHHHHh-----------------------hccchhhHHHHHHHH
Q psy15864 353 LPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYYPMLD-----------------------TFHLWGTLYFYAAIS 409 (553)
Q Consensus 353 ~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~-----------------------~~g~~~~~~~~~~~~ 409 (553)
.+ +|++|.+|++.||+++++...+..+|.++++.+...+.. ..+ |+..+.+++++
T Consensus 136 ~~-~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-WR~~~~~~~ip 213 (502)
T TIGR00887 136 SA-IITSEFATKKWRGAMMAAVFAMQGFGILAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYM-WRILIGFGAVP 213 (502)
T ss_pred HH-HHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccchhccc-HHHHHHHHHHH
Confidence 54 999999999999999999998888888888777654432 123 55555666666
Q ss_pred HHHHhhheEEcccC
Q psy15864 410 VVGTLYMYFVMPET 423 (553)
Q Consensus 410 ~~~~~~~~~~~pet 423 (553)
.++.++..+++|||
T Consensus 214 ~~i~~~~~~~lpES 227 (502)
T TIGR00887 214 ALLALYFRLTIPET 227 (502)
T ss_pred HHHHHHHHHhCCCC
Confidence 66666667889998
No 108
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.39 E-value=3.9e-12 Score=130.17 Aligned_cols=179 Identities=12% Similarity=0.005 Sum_probs=134.5
Q ss_pred hHHHHHHHHHHHHhhhhhHHHHhhHHHHHHhhCCCCC-hHHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHH
Q psy15864 235 LPYAIVTSLFFIGQFGGMTTLQTYAVGIFESIHAPLD-PYFATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAAC 313 (553)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~ 313 (553)
++.+..+++.++........+....|.+.++.+.+.. ..+..++..++.+++.++.|+++||+|||++++++.++.+++
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~~~~~~ 90 (405)
T TIGR00891 11 WNAFSAAWLGWLLDAFDFFLVALVLAEVAGEFGLTTVDAASLISAALISRWFGALMFGLWGDRYGRRLPMVTSIVLFSAG 90 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 3444555555666666667777777888777887643 457777888999999999999999999999999888888888
Q ss_pred HHHHHHHHHhhcccCCCCChhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhHHHH
Q psy15864 314 FIVVAVYAQFHLSYGWDSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYYPML 393 (553)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~ 393 (553)
.+++.+ .++.+.+++.+++.|++.+...... .+++.|.+|++.|+.+.++......++.++++.+.+.+.
T Consensus 91 ~~~~~~---------~~~~~~l~~~~~l~G~~~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~ 160 (405)
T TIGR00891 91 TLACGF---------APGYITMFIARLVIGIGMGGEYGSS-AAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVV 160 (405)
T ss_pred HHHHHH---------hccHHHHHHHHHHHHhhhhhhhHHH-HHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 777665 4567777888888888776655444 488899999999999999999999999999998888877
Q ss_pred hhcc--chhhHHHHHHHHHHHHhhheEEcccCC
Q psy15864 394 DTFH--LWGTLYFYAAISVVGTLYMYFVMPETE 424 (553)
Q Consensus 394 ~~~g--~~~~~~~~~~~~~~~~~~~~~~~pet~ 424 (553)
+..+ |...+. ++++..++.++....+||+.
T Consensus 161 ~~~~~~w~~~f~-~~~~~~~~~~~~~~~~~~~~ 192 (405)
T TIGR00891 161 PVWGDGWRALFF-ISILPIIFALWLRKNIPEAE 192 (405)
T ss_pred HhcCccHHHHHH-HHHHHHHHHHHHHHhCCCCh
Confidence 6655 444444 34444444444555677754
No 109
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.39 E-value=2.1e-12 Score=124.98 Aligned_cols=183 Identities=12% Similarity=0.025 Sum_probs=156.5
Q ss_pred hcchhHHHHHHHHHHHHhhhhhHHHHhhHHHHHHhhCCCCC-hHHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhH
Q psy15864 231 RTFLLPYAIVTSLFFIGQFGGMTTLQTYAVGIFESIHAPLD-PYFATLLLGVAELGGALLCVVLIHYTGKRPLALISTGG 309 (553)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~ 309 (553)
++++.+.++..++.+..++..--.+..-.|.+.++.+++.. .....+.+.+..-++-++.|.++||.+.|..+.+++++
T Consensus 24 ~~~r~qif~~~fiGYa~fYl~RknF~~a~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~~gLil 103 (448)
T COG2271 24 KRWRIQIFLSIFIGYAAFYLTRKNFNLAMPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRYFMAFGLIL 103 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHhhccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCceeehHHHHH
Confidence 34556667777777777777778888888999888877654 45778888999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhcccCCCCChhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHh
Q psy15864 310 SAACFIVVAVYAQFHLSYGWDSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLY 389 (553)
Q Consensus 310 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~ 389 (553)
+++..+++++ ..+.+.+.++..+.+.+.|.++.+.. ..++..+|++.||+..++.+...++|+.+.|.+.
T Consensus 104 sai~nil~Gf---------s~s~~~~~~l~~lng~fQg~Gwpp~~-~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~ 173 (448)
T COG2271 104 SAIVNILFGF---------SPSLFLFAVLWVLNGWFQGMGWPPCA-RTITHWFSRKERGTWWSIWNTSHNIGGALAPLVA 173 (448)
T ss_pred HHHHHHHHhh---------hhHHHHHHHHHHHHHHHhcCCCcHHH-HHHHHHcCccccCceEEEehhhhhcccchHHHHH
Confidence 9999999998 55777888888999999999998775 7889999999999999999999999999999999
Q ss_pred --HHHHhhccchhhHHHHHHHHHHHHhhheEEcccC
Q psy15864 390 --YPMLDTFHLWGTLYFYAAISVVGTLYMYFVMPET 423 (553)
Q Consensus 390 --~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~pet 423 (553)
+.+..+.+|...|++-+++++++++++++.++++
T Consensus 174 ~la~~~~~~~w~~~f~~pgiiaiival~~~~~~rd~ 209 (448)
T COG2271 174 LLAFFAFHGGWRAAFYFPGIIAIIVALILLFLLRDR 209 (448)
T ss_pred HHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 8888777877788888888888888877776554
No 110
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.39 E-value=3.2e-12 Score=130.07 Aligned_cols=164 Identities=13% Similarity=0.007 Sum_probs=131.8
Q ss_pred hHHHHhhHHHHHHhhCCCCC-hHHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHHHHHHHHHhhcccCCC
Q psy15864 252 MTTLQTYAVGIFESIHAPLD-PYFATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAACFIVVAVYAQFHLSYGWD 330 (553)
Q Consensus 252 ~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~ 330 (553)
...+....|.+.+..+.+.. ..+...+..++.+++.++.|+++||+|||+++.++.++.+++.+++.+ ..
T Consensus 10 ~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~---------~~ 80 (399)
T TIGR00893 10 RANLSFAAPMLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAF---------AG 80 (399)
T ss_pred HHhhhHhHHHHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHH---------Hc
Confidence 34455566666677776543 457777888999999999999999999999999998888888877766 45
Q ss_pred CChhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhHHHHhhccchhhHHHHHHHHH
Q psy15864 331 SPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYYPMLDTFHLWGTLYFYAAISV 410 (553)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~~~~ 410 (553)
+.+.+++.+++.+++.+...... ..++.|.+|++.|+.++++......++..+++.+.+.+.+..+|.+.+.+.+++.+
T Consensus 81 ~~~~~~~~~~l~g~~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 159 (399)
T TIGR00893 81 AYVSLYILRVLLGAAEAPFFPGI-ILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHFSWQWAFIIEGVLGI 159 (399)
T ss_pred CHHHHHHHHHHHHHHHHhhhhHH-HHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCCchHHHHHHHHHHH
Confidence 67788888888888876655444 58999999999999999999999999999999999988888887777777777777
Q ss_pred HHHhhheEEcccCCC
Q psy15864 411 VGTLYMYFVMPETEG 425 (553)
Q Consensus 411 ~~~~~~~~~~pet~~ 425 (553)
+..++.+++.|+++.
T Consensus 160 ~~~~~~~~~~~~~~~ 174 (399)
T TIGR00893 160 IWGVLWLKFIPDPPQ 174 (399)
T ss_pred HHHHHhhheecCCCC
Confidence 766666667777643
No 111
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.39 E-value=3.4e-12 Score=130.18 Aligned_cols=179 Identities=12% Similarity=0.131 Sum_probs=134.5
Q ss_pred HHHHHHHHHHHhhhhhHHHHhhHHHHHHhhCCCCCh-HHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHH
Q psy15864 237 YAIVTSLFFIGQFGGMTTLQTYAVGIFESIHAPLDP-YFATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAACFI 315 (553)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~ 315 (553)
++....+..+....+.......+|.+.++.+.+... .+...+..++.+++.++.|+++||+|||+.++++.++.+++.+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~ 83 (392)
T PRK10473 4 FLLCSFALVLLYPAGIDMYLVGLPRIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASL 83 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHH
Confidence 334444455555555566667788888877766433 3666677788899999999999999999999988888887777
Q ss_pred HHHHHHHhhcccCCCCChhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhHHHHhh
Q psy15864 316 VVAVYAQFHLSYGWDSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYYPMLDT 395 (553)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~~ 395 (553)
++.. ..+.+.+++.+++.+++.+.... ..+.++.|.+|++.|+.+.++.+....++..++|.+.+.+.+.
T Consensus 84 ~~~~---------~~~~~~~~~~~~l~g~~~~~~~~-~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~ 153 (392)
T PRK10473 84 LCSL---------AETSSLFLAGRFLQGIGAGCCYV-VAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLK 153 (392)
T ss_pred HHHH---------hCcHHHHHHHHHHHHhhhhHHHH-HHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 6665 44556667777777776655443 3458889999999999999999999889989999888877777
Q ss_pred ccchhhHHHHHHHHHHHHhhheEEcccCCC
Q psy15864 396 FHLWGTLYFYAAISVVGTLYMYFVMPETEG 425 (553)
Q Consensus 396 ~g~~~~~~~~~~~~~~~~~~~~~~~pet~~ 425 (553)
.+|...+.+.+++.++..++.++++||++.
T Consensus 154 ~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 183 (392)
T PRK10473 154 FPWQSLFYTMAAMGILVLLLSLFILKETRP 183 (392)
T ss_pred cChHHHHHHHHHHHHHHHHHHHHHcCCCCC
Confidence 787777777777766666666666787643
No 112
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.39 E-value=4.7e-12 Score=128.94 Aligned_cols=159 Identities=9% Similarity=-0.024 Sum_probs=126.1
Q ss_pred HhhHHHHHHhhCCCCCh-HHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHHHHHHHHHhhcccCCCCChh
Q psy15864 256 QTYAVGIFESIHAPLDP-YFATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAACFIVVAVYAQFHLSYGWDSPLV 334 (553)
Q Consensus 256 ~~~~~~~~~~~g~~~~~-~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 334 (553)
...+|.+.++.+.+... .+......++.+++.++.|+++||+|||++++.+.++.+++.++..+ ..+.+.
T Consensus 40 ~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~---------~~~~~~ 110 (394)
T PRK10213 40 VSLLTPMAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLLTLSCLLVSF---------ANSFSL 110 (394)
T ss_pred HhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHHHHHH---------HChHHH
Confidence 34566677777766443 46666778888999999999999999999999999998888777665 557788
Q ss_pred HHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhHHHHhhccchhhHHHHHHHHHHHHh
Q psy15864 335 PTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYYPMLDTFHLWGTLYFYAAISVVGTL 414 (553)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 414 (553)
+++.+++.+++.+.... ....++.|.+|++.|+.+.++......++..++|.+.+.+.+..+|.+.+++.+++.+++.+
T Consensus 111 l~~~r~l~G~~~g~~~~-~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~l~~~~~l 189 (394)
T PRK10213 111 LLIGRACLGLALGGFWA-MSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELIGWRNVFNAAAVMGVLCIF 189 (394)
T ss_pred HHHHHHHHHHhhHHHHH-HHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHH
Confidence 88889998988776554 44588899999999999999999999999999999999998888877777776665555544
Q ss_pred hheEEcccCC
Q psy15864 415 YMYFVMPETE 424 (553)
Q Consensus 415 ~~~~~~pet~ 424 (553)
+.+..+||++
T Consensus 190 ~~~~~~p~~~ 199 (394)
T PRK10213 190 WIIKSLPSLP 199 (394)
T ss_pred HHHHHCCCCC
Confidence 4444567753
No 113
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.39 E-value=3.6e-12 Score=130.66 Aligned_cols=176 Identities=13% Similarity=-0.049 Sum_probs=132.2
Q ss_pred HHHHHHHHHhhhhhHHHHhhHHHHHHhhCCCCC-hHHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHHHH
Q psy15864 239 IVTSLFFIGQFGGMTTLQTYAVGIFESIHAPLD-PYFATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAACFIVV 317 (553)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~ 317 (553)
..+++..+.............|.+.++.+.+.. ..+......++.+++.++.|+++||+|||+++..+.++..++.+++
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~ 97 (406)
T PRK11551 18 GLCFLVALLEGLDLQSAGVAAPRMAQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADRIGRKRILIVSVALFGLFSLAT 97 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHH
Confidence 333334444444455566677888777777643 3477778889999999999999999999999999888777777665
Q ss_pred HHHHHhhcccCCCCChhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhHHHHhhcc
Q psy15864 318 AVYAQFHLSYGWDSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYYPMLDTFH 397 (553)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~~~g 397 (553)
.+ ..+.+.+++.+++.+++.+...... .+++.|.+|++.|++++++.+....+++.+++.+.+.+.+..+
T Consensus 98 ~~---------~~~~~~~~~~~~l~G~~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 167 (406)
T PRK11551 98 AQ---------AWDFPSLLVARLLTGVGLGGALPNL-IALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGVLAAGDAA 167 (406)
T ss_pred HH---------hccHHHHHHHHHHHHhhHHHHHHHH-HHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccC
Confidence 55 5567777888888888776655443 4889999999999999999999999999999888777777777
Q ss_pred chhhHHHHHHHHHHHHhhheEEcccCC
Q psy15864 398 LWGTLYFYAAISVVGTLYMYFVMPETE 424 (553)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~pet~ 424 (553)
|...+++.+++.++..++..+++||+.
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~l~~~~ 194 (406)
T PRK11551 168 WRHIFYVGGVGPLLLVPLLMRWLPESR 194 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCh
Confidence 666666666655555555556678763
No 114
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.38 E-value=1.1e-12 Score=137.80 Aligned_cols=175 Identities=17% Similarity=0.127 Sum_probs=138.1
Q ss_pred HHHHHHHHhhhhhHHHHhhHHHHHHhhCCCC-ChHHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHHHHH
Q psy15864 240 VTSLFFIGQFGGMTTLQTYAVGIFESIHAPL-DPYFATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAACFIVVA 318 (553)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~ 318 (553)
.+++..+.............|.+.++.+.+. +..+......++.+++.++.|+++||+|||++++++.++.+++.+++.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~ 85 (485)
T TIGR00711 6 VLMLGTFMAVLDSTIVNVAIPTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLGSLLCG 85 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHHHHHHh
Confidence 3334444445555666777888888887764 345778888999999999999999999999999999888888887776
Q ss_pred HHHHhhcccCCCCChhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhHHHHhhccc
Q psy15864 319 VYAQFHLSYGWDSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYYPMLDTFHL 398 (553)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~~~g~ 398 (553)
. .++.+.+++.+++.|++.+... +...+++.|.+|++.|+.+.++......++..++|.+.+.+.+..+|
T Consensus 86 ~---------~~~~~~l~~~~~~~G~~~~~~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~w 155 (485)
T TIGR00711 86 V---------APNLELMIIFRVIQGFGGGPLI-PLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENYHW 155 (485)
T ss_pred C---------cCCHHHHHHHHHHHHhhhhhHH-HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCcCc
Confidence 5 5677788888888888776554 44458999999999999999999999999999999999998888888
Q ss_pred hhhHHHHHHHHHHHHhhheEEcccCC
Q psy15864 399 WGTLYFYAAISVVGTLYMYFVMPETE 424 (553)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~~~~pet~ 424 (553)
.+.+++.+.+.++..++.++++|+.+
T Consensus 156 ~~~f~~~~~~~~~~~~~~~~~~~~~~ 181 (485)
T TIGR00711 156 RWIFLINVPIGIIVVVVAFFILPRDK 181 (485)
T ss_pred eehhhhhhHHHHHHHHHHHHHcCCcc
Confidence 87777766666666655556667653
No 115
>PRK09669 putative symporter YagG; Provisional
Probab=99.38 E-value=3.9e-12 Score=131.83 Aligned_cols=240 Identities=11% Similarity=0.037 Sum_probs=133.9
Q ss_pred hhhhhcc-CcccccchhchhhhhHHHHHHHHHhhcc----c-------cchHHHHHHHHHHHHHHHHHhcc-ccCCceee
Q psy15864 105 TYVAEIT-QPHLRGMLSATASMTTIFGTVSQLFLGS----F-------LHWRSAAILNLLFPILALCALYF-IPESPHWL 171 (553)
Q Consensus 105 ~~i~e~~-p~~~Rg~~~~~~~~~~~lG~~l~~~l~~----~-------lgWr~~f~i~~i~~li~~i~~~~-lpEsp~~l 171 (553)
++.+|++ ++++|++..++...+..+|.++++.+.. . .+|+..+.+.++++++++++.++ .+|.+.-
T Consensus 132 al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~~~~~~~~~g~~~~~~i~~ii~~v~~~~~~~~~~e~~~~- 210 (444)
T PRK09669 132 AMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIALPLVDILGKGDEQKGYFYAMMVMGLLGVVLFFCCFFMTKERYTP- 210 (444)
T ss_pred HhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHhCCeEEecCC-
Confidence 6678887 5578998888877777777666543221 1 27998888888887776554443 5553210
Q ss_pred eecCChHHHHHHHHHHcCCCCCcchHHHHHHHHHHHHHHHHHhcCCCCCCChhhhhhhhhcchhHHHHHHHHHHHHhhhh
Q psy15864 172 ISQGRMQEASASLCWLRGWVTPDKVQTELSQITKAIEESELKRLGKDGQRRPNYRMYMRRTFLLPYAIVTSLFFIGQFGG 251 (553)
Q Consensus 172 ~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (553)
.+ + .... ....++.+++++.++.+++..++........
T Consensus 211 ---~~--~------------~~~~-------------------------~~~~~~~~~~n~~~~~l~~~~~~~~~~~~~~ 248 (444)
T PRK09669 211 ---EV--D------------NSSS-------------------------VWKDLKLLLGNSQWRIMFIFNVVLLTAVVTR 248 (444)
T ss_pred ---CC--c------------CCCC-------------------------HHHHHHHHhCCchHHHHHHHHHHHHHHHHHH
Confidence 00 0 0000 0011222333333333322222221221111
Q ss_pred hHHHHhhHHHHHHhhCCCCChHHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHHHHHHHHHhhcccCCCC
Q psy15864 252 MTTLQTYAVGIFESIHAPLDPYFATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAACFIVVAVYAQFHLSYGWDS 331 (553)
Q Consensus 252 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 331 (553)
.....+|..+.+ +.............+..+++.+++++++||+|+|+.+.++.++.+++.+.+.+.. ..+
T Consensus 249 ~~~~~y~~~~~~---~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~-------~~~ 318 (444)
T PRK09669 249 GGATLYYVNYVL---LRPDLATLFLVTGMIAGLFGALLSERLLGKFDRVRAFKWTIVAFVILSALIFFIP-------PSN 318 (444)
T ss_pred hhhhheeeeeec---CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhC-------cch
Confidence 111122211111 1111122333445577788889999999999999988877665554333322211 234
Q ss_pred ChhHHHHHHHHHHHHhhhhccccceeeccccc-------cchhhhhhhHHHHHHHHHHHHHHHHhHHHHhhccc
Q psy15864 332 PLVPTVFLVLAAFLTHICIRLLPWMLIGEVFP-------NNIRATASGASGSSSYIFAFAVNKLYYPMLDTFHL 398 (553)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p-------~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~~~g~ 398 (553)
.+.+++..++.+++.+... ++++++++|+.+ .+..|...|+..++..++..+++.+.+.+++..|+
T Consensus 319 ~~~~~~~~~i~g~~~~~~~-~~~~am~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll~~~Gy 391 (444)
T PRK09669 319 VWLIFALNILFNFIQNLTT-PLQWSMFSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWILAWVDY 391 (444)
T ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHHHHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 4445555566666665444 555688888875 23345667888888899999999999988876554
No 116
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.37 E-value=2.8e-11 Score=125.98 Aligned_cols=322 Identities=11% Similarity=-0.013 Sum_probs=165.0
Q ss_pred ccccccccccc--chhhhhhhhhccCccc---ccchhchhhhhHHHHHHHHHhhcccc----chHHHHHHHHHHHHHHHH
Q psy15864 89 KGTFLYKMAAP--LVLVLTYVAEITQPHL---RGMLSATASMTTIFGTVSQLFLGSFL----HWRSAAILNLLFPILALC 159 (553)
Q Consensus 89 ~gr~~~G~ga~--~~~~~~~i~e~~p~~~---Rg~~~~~~~~~~~lG~~l~~~l~~~l----gWr~~f~i~~i~~li~~i 159 (553)
-++++.|+|.+ .+...+++++++|+++ |+.+.+++.++.++|.++|+++++++ |||+.|++.++..++.++
T Consensus 107 ~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~~g~~~~f~~~~~~~~~~~l 186 (475)
T TIGR00924 107 YGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIAENYGYHVGFNLAAVGMVIGLL 186 (475)
T ss_pred HHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHH
Confidence 35667777654 3577789999998754 88899999999999999999888765 899999998765555443
Q ss_pred Hhccc----cCCceeeeecCChHHHHHHHH--H--------HcC--CCCCcchHHHHHH---HHHHHHHHHHHhcCCCCC
Q psy15864 160 ALYFI----PESPHWLISQGRMQEASASLC--W--------LRG--WVTPDKVQTELSQ---ITKAIEESELKRLGKDGQ 220 (553)
Q Consensus 160 ~~~~l----pEsp~~l~~~~~~~~a~~~l~--~--------~~~--~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 220 (553)
.+++. ++.|+.- ...+.++...... . +.. ............. .............
T Consensus 187 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 260 (475)
T TIGR00924 187 TFFAGRHMLRDIGSVP-DPLSGQGKTYGKLLLALLAALALVFFCAWLMHHVVIANILLMTVTLAVIIFFFRLAFK----- 260 (475)
T ss_pred HHHHcccccccCCCCC-CCcchhhhhhHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHh-----
Confidence 33332 2222100 0000010000000 0 000 0000000000000 0000000000000
Q ss_pred CChhhhhhhhhcchhHHHHHHHHHHHHhhhhhHHHHhhHHHHHHh-hC-----CCCChHHHHHHHHHHHHHHHHHHhhhh
Q psy15864 221 RRPNYRMYMRRTFLLPYAIVTSLFFIGQFGGMTTLQTYAVGIFES-IH-----APLDPYFATLLLGVAELGGALLCVVLI 294 (553)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g-----~~~~~~~~~~~~~i~~~~g~~~~g~l~ 294 (553)
.......+++. ..++..++..+..+..+.-....++.+..+ .+ +.....+...+.++..++..++..++-
T Consensus 261 --~~~~~~~~~~~--~~~l~l~~~~~~~~~~~~Q~~s~l~l~~~~~~~~~~~~~~ip~~~~~~~n~~~iil~~p~~~~~~ 336 (475)
T TIGR00924 261 --PRLDAVARNKM--YAYIVLFLEAVVFWVLYAQMPTSLNFFADNNMHHEMLGMSVPVIWFQSLNPFWVVVGSPVLAMIW 336 (475)
T ss_pred --ccCCHHHHhHH--HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhccccccceEECHHHHHhhhHHHHHHHHHHHHHHH
Confidence 00000001111 112222222222222222323323333222 11 122244556666666666655544433
Q ss_pred cccCC-----ccee--ecchhHHHHHHHHHHHHHHhhcccCCCCChhHHHHHHHHHHHHhhhhccccceeeccccccchh
Q psy15864 295 HYTGK-----RPLA--LISTGGSAACFIVVAVYAQFHLSYGWDSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIR 367 (553)
Q Consensus 295 dr~Gr-----r~~l--~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R 367 (553)
.+++| +... .+++++.+++.+++++...........+.+++++..++.+++-... .+....++++..|++.|
T Consensus 337 ~~l~~~~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~~~~~ge~~~-~p~~~~~~~~~aP~~~~ 415 (475)
T TIGR00924 337 TRLGRKGKDPTTPLKFTLGMLFCGASFLTFAASIWFADAGGLTSPWFMVLIYLFQTLGELMI-SPLGLSWWTKIAPQRLM 415 (475)
T ss_pred HHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHH-hHHHHHHHHHhCCHHHH
Confidence 33333 2222 5566666666666554322111111346666777777777766444 45556899999999999
Q ss_pred hhhhhHHHHHHHHHHHHHHHHhHHHHhhccchhhHHHHHHHHHHHHhhheEEcc
Q psy15864 368 ATASGASGSSSYIFAFAVNKLYYPMLDTFHLWGTLYFYAAISVVGTLYMYFVMP 421 (553)
Q Consensus 368 g~~~~~~~~~~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p 421 (553)
|+.+|+......++..+++.+........++...+...+++++++.++.++..|
T Consensus 416 g~~~g~~~l~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 469 (475)
T TIGR00924 416 GQMLGMWFLAQAMGSLLGGYLATFGAVPQGVTGVFGKIGLVTLLVGVVMALMVP 469 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999888776665555555666666666555555544333
No 117
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.37 E-value=5.2e-12 Score=128.22 Aligned_cols=166 Identities=9% Similarity=0.026 Sum_probs=131.2
Q ss_pred hhhhHHHHhhHHHHHHhhCCCCC-hHHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHHHHHHHHHhhccc
Q psy15864 249 FGGMTTLQTYAVGIFESIHAPLD-PYFATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAACFIVVAVYAQFHLSY 327 (553)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~ 327 (553)
..........+|.+.++.|.+.. ..+......++.+++.++.|+++||+|||+++.++.++.+++.++.++
T Consensus 16 ~~~~~~~~~~l~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~l~~~-------- 87 (382)
T PRK10091 16 GMAEFGIMGVLTELAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAMFTL-------- 87 (382)
T ss_pred HhhHHHHHhChHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHH--------
Confidence 33344555677777777777643 357778889999999999999999999999999999988888887766
Q ss_pred CCCCChhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhHHHHhhccchhhHHHHHH
Q psy15864 328 GWDSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYYPMLDTFHLWGTLYFYAA 407 (553)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~ 407 (553)
.++.+.+++.+++.|++.+...... .+++.+.+|++.|+.++++......++..+++.+.+.+.+..+|.+.+.+.++
T Consensus 88 -~~~~~~l~~~r~l~G~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~ 165 (382)
T PRK10091 88 -SSSYLMLAIGRLVSGFPHGAFFGVG-AIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEFSWRYTFLLIAV 165 (382)
T ss_pred -hCcHHHHHHHHHHHHhhhHHHHHHH-HHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhhhccHHHHHHHHHH
Confidence 6678888888988888776654333 47788999999999999998888889999999888888887887777777777
Q ss_pred HHHHHHhhheEEcccCC
Q psy15864 408 ISVVGTLYMYFVMPETE 424 (553)
Q Consensus 408 ~~~~~~~~~~~~~pet~ 424 (553)
+.++..++.++++||.+
T Consensus 166 ~~~~~~~~~~~~lp~~~ 182 (382)
T PRK10091 166 FNIAVLASIYFWVPDIR 182 (382)
T ss_pred HHHHHHHHHHHhCCCCC
Confidence 66666665566778764
No 118
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.36 E-value=6.2e-12 Score=125.86 Aligned_cols=243 Identities=19% Similarity=0.178 Sum_probs=149.3
Q ss_pred hhhhhccC-cccccchhchhhhhHHHHHHHHHhhcccc-----------chHHHHHHHHHHHHHHHHHhcc-ccCCceee
Q psy15864 105 TYVAEITQ-PHLRGMLSATASMTTIFGTVSQLFLGSFL-----------HWRSAAILNLLFPILALCALYF-IPESPHWL 171 (553)
Q Consensus 105 ~~i~e~~p-~~~Rg~~~~~~~~~~~lG~~l~~~l~~~l-----------gWr~~f~i~~i~~li~~i~~~~-lpEsp~~l 171 (553)
++..|+++ +++|.+..++-+.+..+|.++..++...+ ||+...++.+++++++++++++ +.|.+.-
T Consensus 135 al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~plv~~~g~~~~~~g~~~~~~~~~vi~~i~~l~~~~~v~ER~~~- 213 (467)
T COG2211 135 ALGPEITQDPQERASLTSWRMVFASLGGLLVAVLFPPLVKLFGGGDKALGYQGTALVLGVIGVILLLFCFFNVKERVVE- 213 (467)
T ss_pred hcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhcccCc-
Confidence 55677774 68999999999999999877654443222 8999999999888888777766 6664320
Q ss_pred eecCChHHHHHHHHHHcCCCCCcchHHHHHHHHHHHHHHHHHhcCCCCCCChhhhhhhhhcchhHHHHHHHHHHHHhhhh
Q psy15864 172 ISQGRMQEASASLCWLRGWVTPDKVQTELSQITKAIEESELKRLGKDGQRRPNYRMYMRRTFLLPYAIVTSLFFIGQFGG 251 (553)
Q Consensus 172 ~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (553)
.+...+. . .......+...++++.+....+..++.+......
T Consensus 214 -~~~~~~~----------------~---------------------~~~~~~~~~~~~~Nrp~~~~l~~~l~~~~~~~i~ 255 (467)
T COG2211 214 -TQPTKTG----------------V---------------------KLKLKDSFLLIFKNRPLLLLLLMNLLLFIAFNIR 255 (467)
T ss_pred -cccCccc----------------c---------------------cccHHHHHHHHHccchHHHHHHHHHHHHHHHHHH
Confidence 0000000 0 0000011222333333322222222222222221
Q ss_pred hHHHHhhHHHHHHhhCCCCC-hHHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHHHHHHHHHhhcccCCC
Q psy15864 252 MTTLQTYAVGIFESIHAPLD-PYFATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAACFIVVAVYAQFHLSYGWD 330 (553)
Q Consensus 252 ~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~ 330 (553)
.....+|..+. .+.+.. ..+.......+.+++.++..++++|+|+|+++.++.++.+++.+++.+.+ .+
T Consensus 256 ~s~~~yy~~y~---lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~~~~i~~~~~~f~~-------~~ 325 (467)
T COG2211 256 GSIMVYYVTYV---LGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLFLIGLLLLAVGYLLLYFTP-------AG 325 (467)
T ss_pred hhhhheeEEEE---cCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHhhc-------Cc
Confidence 22222222221 222222 22444555666677799999999999999999999999998888887743 34
Q ss_pred CChhHHHHHHHHHHHHhhhhccccceeecccccc-------chhhhhhhHHHHHHHHHHHHHHHHhHHHHhhcc
Q psy15864 331 SPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPN-------NIRATASGASGSSSYIFAFAVNKLYYPMLDTFH 397 (553)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~-------~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~~~g 397 (553)
+.+..++..++.+++.+.. .+++|+.++|+..- +.-|...|+..++..++.+++..+.+.+++..|
T Consensus 326 ~~~l~~~~~~i~~~g~~~~-~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~g~~L~~~G 398 (467)
T COG2211 326 SVVLIVVALIIAGVGTGIA-NPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFIPGWILGAIG 398 (467)
T ss_pred chHHHHHHHHHHHHHhhcc-ccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 5556666666666666444 57788999988642 334666788888899999999999988886654
No 119
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.35 E-value=1.3e-11 Score=132.13 Aligned_cols=206 Identities=12% Similarity=0.137 Sum_probs=119.1
Q ss_pred ccccccccccc--chhhhhhhhhccCcccccchhchhhhhHHHHHHHHHhhcccc-------------------------
Q psy15864 89 KGTFLYKMAAP--LVLVLTYVAEITQPHLRGMLSATASMTTIFGTVSQLFLGSFL------------------------- 141 (553)
Q Consensus 89 ~gr~~~G~ga~--~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~lG~~l~~~l~~~l------------------------- 141 (553)
-+|+++|+|.+ .+++.+|+.|++|+++|+++++++.++..+|.++|+++++++
T Consensus 177 ~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWi 256 (633)
T TIGR00805 177 VSQLLRGIGATPIFPLGISYIDDFAKSKNSPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWI 256 (633)
T ss_pred HHHHHHhccCCcchhcCchhhhccCCccccHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHH
Confidence 48999999865 467889999999999999999999999999999998876542
Q ss_pred -chHHHHHHHHHHHHHHHHHhccccCCceeeeecCChHHHHHHHHHHcCCCCCcchHHHHHHHHHHHHHHHHHhcCCCCC
Q psy15864 142 -HWRSAAILNLLFPILALCALYFIPESPHWLISQGRMQEASASLCWLRGWVTPDKVQTELSQITKAIEESELKRLGKDGQ 220 (553)
Q Consensus 142 -gWr~~f~i~~i~~li~~i~~~~lpEsp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (553)
+||..|++.++++++..+.++++|+..+-...+.+.+..+.. .... ..... .... .....+
T Consensus 257 GaWwl~Fli~g~l~~l~~v~l~~~p~~lp~~~~~~~~~~~~~~--~~~~-~~~~~-~~~~---~~~~~~----------- 318 (633)
T TIGR00805 257 GAWWIGFLICGGVALLTSIPFFFFPKALPKEGKRVNVDVHETE--KLEK-SEDKS-RKKN---SDITKD----------- 318 (633)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCccccCCcccccchhhhhhh--cccc-ccccc-chhh---hhhHHH-----------
Confidence 277789888888887766566666542110000000000000 0000 00000 0000 000000
Q ss_pred CChhhhhhhhhcchhHHHHHHHHHHHHhhhhhHHHHhhHHHHHHh-hCCCCChH-HHHHHHHH-HHHHHHHHHhhhhccc
Q psy15864 221 RRPNYRMYMRRTFLLPYAIVTSLFFIGQFGGMTTLQTYAVGIFES-IHAPLDPY-FATLLLGV-AELGGALLCVVLIHYT 297 (553)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~-~~~~~~~i-~~~~g~~~~g~l~dr~ 297 (553)
....++.++ ..+.++...+..+.....++.+..|+|.+++. .+++.... +...+..+ +.++|.+++|+++||+
T Consensus 319 ~~~~~~~Ll----~n~~f~~~~l~~~~~~~~~~~~~~~lP~yl~~~~g~s~~~ag~l~~~~~i~~~~vG~~l~G~l~~r~ 394 (633)
T TIGR00805 319 FPKIIKRLL----CNPIYMLVILAQVIDSLAFNGYITFLPKYLENQYGISSAEANFLIGVVNLPAAGLGYLIGGFIMKKF 394 (633)
T ss_pred HHHHHHHHH----cCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHhhhhhhhHHHHHHhhhhheeeee
Confidence 001122233 33334444444555555666777788888864 56543332 33333343 5688999999999999
Q ss_pred CC--cceeecchhHHHHHHHH
Q psy15864 298 GK--RPLALISTGGSAACFIV 316 (553)
Q Consensus 298 Gr--r~~l~~~~~~~~i~~~~ 316 (553)
+. |.++.+++++.+++.++
T Consensus 395 ~~~~~~~~~~~~~~~~~~~~~ 415 (633)
T TIGR00805 395 KLNVKKAAYFAICLSTLSYLL 415 (633)
T ss_pred cccHHHHHHHHHHHHHHHHHH
Confidence 85 45555555555555433
No 120
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.35 E-value=4.1e-12 Score=127.62 Aligned_cols=163 Identities=13% Similarity=-0.055 Sum_probs=122.6
Q ss_pred hHHHHhhHHHHHHhhCCCCCh-HHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHHHHHHHHHhhcccCCC
Q psy15864 252 MTTLQTYAVGIFESIHAPLDP-YFATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAACFIVVAVYAQFHLSYGWD 330 (553)
Q Consensus 252 ~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~ 330 (553)
...+...+|.+.++.+.+... .+..+.+.++.+++.++.|+++||+|||++++.++...+.+.+ .... ..
T Consensus 7 ~~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~-~~~~--------~~ 77 (368)
T TIGR00903 7 WVTFSPVLSLVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAG-RLLD--------PF 77 (368)
T ss_pred HHHHHhhHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHH-HHHH--------hc
Confidence 344556777777777776444 4677778899999999999999999999876544433333322 1110 24
Q ss_pred CChhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhHHHHhhccchhhHHHHHHHHH
Q psy15864 331 SPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYYPMLDTFHLWGTLYFYAAISV 410 (553)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~~~~ 410 (553)
+.+.+++.+++.|++.+.. .+. ...++|.+|++.|++++++......+|..+++.+.+.+.+..+|+..+++.+++.+
T Consensus 78 ~~~~l~~~R~l~G~g~~~~-~~~-~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~gWr~~f~~~~~l~~ 155 (368)
T TIGR00903 78 NYEWLLACQLLAALGQPFL-LNA-FAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAGGLQLLIIPIAAVAA 155 (368)
T ss_pred cHHHHHHHHHHHHhHhHHH-HHH-HHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHH
Confidence 6678888899998877643 233 35568999999999999999999999999999999988888888877777788777
Q ss_pred HHHhhheEEcccCCC
Q psy15864 411 VGTLYMYFVMPETEG 425 (553)
Q Consensus 411 ~~~~~~~~~~pet~~ 425 (553)
+..++.++++||+..
T Consensus 156 ~~~~~~~~~lp~~p~ 170 (368)
T TIGR00903 156 AGIILVLAALPALPF 170 (368)
T ss_pred HHHHHHHHHcCCCCC
Confidence 777777778898743
No 121
>PRK11462 putative transporter; Provisional
Probab=99.34 E-value=1.7e-11 Score=127.12 Aligned_cols=238 Identities=14% Similarity=0.068 Sum_probs=128.3
Q ss_pred hhhhhccC-cccccchhchhhhhHHHHHHHHHhhccc-----------cchHHHHHHHHHHHHHHHHHhcc-ccCCceee
Q psy15864 105 TYVAEITQ-PHLRGMLSATASMTTIFGTVSQLFLGSF-----------LHWRSAAILNLLFPILALCALYF-IPESPHWL 171 (553)
Q Consensus 105 ~~i~e~~p-~~~Rg~~~~~~~~~~~lG~~l~~~l~~~-----------lgWr~~f~i~~i~~li~~i~~~~-lpEsp~~l 171 (553)
++..|+++ +++|++..++...+..+|.++++++... .+|+....+.+++++++.++.++ .+|.++-
T Consensus 132 al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~g~~~~~~g~~~~~~i~~ii~~i~~~i~~~~~kE~~~~- 210 (460)
T PRK11462 132 ALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVNLIGGDNKPLGFQGGIAVLSVVAFMMLAFCFFTTKERVEA- 210 (460)
T ss_pred HHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHHhcceeccCC-
Confidence 66788887 7899999999998888887766544322 16888888877777666544443 5553210
Q ss_pred eecCChHHHHHHHHHHcCCCCCcchHHHHHHHHHHHHHHHHHhcCCCCCCChhhhhhhhhcchhHHHHHHHHHHHHhhhh
Q psy15864 172 ISQGRMQEASASLCWLRGWVTPDKVQTELSQITKAIEESELKRLGKDGQRRPNYRMYMRRTFLLPYAIVTSLFFIGQFGG 251 (553)
Q Consensus 172 ~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (553)
.+.+ ... ...++..++++.++.++...++..+.....
T Consensus 211 -~~~~-----------------~~~-------------------------~~~l~~~~~Nk~~~~l~~~~~~~~~~~~~~ 247 (460)
T PRK11462 211 -PPTT-----------------TSM-------------------------REDLRDIWQNDQWRIVGLLTIFNILAVCVR 247 (460)
T ss_pred -CccC-----------------CCH-------------------------HHHHHHHhCChHHHHHHHHHHHHHHHHHHH
Confidence 0000 000 011122222222322222222222222222
Q ss_pred hHHHHhhHHHHHHhhCCCCChHHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHHHHHHHHHhhcccCCCC
Q psy15864 252 MTTLQTYAVGIFESIHAPLDPYFATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAACFIVVAVYAQFHLSYGWDS 331 (553)
Q Consensus 252 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 331 (553)
.....+|..++ .+..........+..++.+++.+++++++||+|+|.++..+.++.++..+++.+.. ..+
T Consensus 248 ~~~~~y~~~y~---~g~~~~~~~~l~~~~i~~iig~~l~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~-------~~~ 317 (460)
T PRK11462 248 GGAMMYYVTWI---LGTPEVFVAFLTTYCVGNLIGSALAKPLTDWKCKVTIFWWTNALLAVISLAMFFVP-------MQA 317 (460)
T ss_pred HhHhhhhhhhh---cCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhc-------hhH
Confidence 22223333322 22222223445567788899999999999999999876654443333333322211 112
Q ss_pred ChhHHHHHHHHHHHHhhhhccccceeeccccc-----cchhh--hhhhHHHHHHHHHHHHHHHHhHHHHhhcc
Q psy15864 332 PLVPTVFLVLAAFLTHICIRLLPWMLIGEVFP-----NNIRA--TASGASGSSSYIFAFAVNKLYYPMLDTFH 397 (553)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p-----~~~Rg--~~~~~~~~~~~~~~~i~~~~~~~~~~~~g 397 (553)
.+..++..++.+++. ....++++++++|... +..|. ...+...++..++..+++.+.+.+++..|
T Consensus 318 ~~~~~~~~~l~g~~~-~~~~~l~~~m~ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~~i~g~iL~~~G 389 (460)
T PRK11462 318 SITMFVFIFVIGVLH-QLVTPIQWVMMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIGWMLAYGG 389 (460)
T ss_pred HHHHHHHHHHHHHHH-HHHHHHHHHHHHHhHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 222333334445444 3333444566777765 22444 44466667888899999888888775544
No 122
>PRK10504 putative transporter; Provisional
Probab=99.34 E-value=9.6e-12 Score=130.10 Aligned_cols=174 Identities=10% Similarity=-0.017 Sum_probs=131.6
Q ss_pred HHHHHHHHhhhhhHHHHhhHHHHHHhhCCCCCh-HHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHHHHH
Q psy15864 240 VTSLFFIGQFGGMTTLQTYAVGIFESIHAPLDP-YFATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAACFIVVA 318 (553)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~ 318 (553)
..++..+......+.+..++|.+.++.|.+... .+..+...++.+++.++.|+++||+|||++++.+.++.+++.++..
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~ 93 (471)
T PRK10504 14 IVAFGFFMQSLDTTIVNTALPSMAQSLGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIFFTAIVLFTLGSLFCA 93 (471)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHH
Confidence 333444445555566677888888888876443 3666677788899999999999999999998888777777766655
Q ss_pred HHHHhhcccCCCCChhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhHHHHhhccc
Q psy15864 319 VYAQFHLSYGWDSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYYPMLDTFHL 398 (553)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~~~g~ 398 (553)
+ ..+.+.+++.+++.+++.+... +...+++.|.+|++.|+++.++......++..++|.+.+.+.+..+|
T Consensus 94 ~---------~~~~~~l~~~~~l~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~~gw 163 (471)
T PRK10504 94 L---------SGTLNELLLARVLQGVGGAMMV-PVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEYASW 163 (471)
T ss_pred H---------hCCHHHHHHHHHHHHhhhHHHH-HHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhccH
Confidence 4 4566777788888888776654 34457889999999999999999999999999999999999888887
Q ss_pred hhhHHHHHHHHHHHHhhheEEcccC
Q psy15864 399 WGTLYFYAAISVVGTLYMYFVMPET 423 (553)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~~~~pet 423 (553)
.+.+.+...+..+..++.....|+.
T Consensus 164 ~~~f~~~~~~~~l~~~~~~~~~~~~ 188 (471)
T PRK10504 164 HWIFLINIPVGIIGAIATLMLMPNY 188 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 7777766665555555555555654
No 123
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.34 E-value=7.3e-12 Score=129.24 Aligned_cols=156 Identities=11% Similarity=-0.019 Sum_probs=120.6
Q ss_pred HHHHHHHHHhhhhhHHHHhhHHHHHHhhCCCCC-hHHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHHHH
Q psy15864 239 IVTSLFFIGQFGGMTTLQTYAVGIFESIHAPLD-PYFATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAACFIVV 317 (553)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~ 317 (553)
..+.+..+..........+..|.+.++.+.+.. ..+...+..++.+++.++.|+++||+|||++++++.++.+++.++.
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~ 100 (426)
T PRK12307 21 FSAWLGYVFDGFDFMLIFYIMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVAYSVGTGLS 100 (426)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHH
Confidence 333344444444455556666777677776643 3466777889999999999999999999999999999988888777
Q ss_pred HHHHHhhcccCCCCChhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhHHHHhhcc
Q psy15864 318 AVYAQFHLSYGWDSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYYPMLDTFH 397 (553)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~~~g 397 (553)
.+ ..+.+.+++++++.|++.+...... ..++.|.+|++.|+++.++......++.++++.+.+.+.+..+
T Consensus 101 ~~---------~~~~~~l~~~r~l~G~g~g~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~~~~ 170 (426)
T PRK12307 101 GL---------ASGVIMLTLSRFIVGMGMAGEYACA-STYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAEAYG 170 (426)
T ss_pred HH---------HhHHHHHHHHHHHHHHHHhhHHHHH-HHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHcccCC
Confidence 66 4566788888888888776555444 4888999999999999999998888999999988888777777
Q ss_pred chhhHHH
Q psy15864 398 LWGTLYF 404 (553)
Q Consensus 398 ~~~~~~~ 404 (553)
|...+++
T Consensus 171 w~~~f~i 177 (426)
T PRK12307 171 WRAAFFV 177 (426)
T ss_pred HHHHHHH
Confidence 6666554
No 124
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.33 E-value=4.9e-11 Score=121.99 Aligned_cols=290 Identities=13% Similarity=0.070 Sum_probs=169.5
Q ss_pred hhhhhhhccCcccc--cchhchhhhhHHHHHHHHHhhcccc-------------------chHHHHHHHHHHHHHHHHH-
Q psy15864 103 VLTYVAEITQPHLR--GMLSATASMTTIFGTVSQLFLGSFL-------------------HWRSAAILNLLFPILALCA- 160 (553)
Q Consensus 103 ~~~~i~e~~p~~~R--g~~~~~~~~~~~lG~~l~~~l~~~l-------------------gWr~~f~i~~i~~li~~i~- 160 (553)
.-++++|.+|+++| +.+.++.+.+.++|.++|+.+++.. +-|+.|++.+++.++..++
T Consensus 135 ~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t 214 (477)
T TIGR01301 135 CRAFLADLTGGDARRTRIANAYFSFFMAIGNVLGYAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIA 214 (477)
T ss_pred HHHhcccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHH
Confidence 34889999998865 6899999998999999988877542 4578899988877777544
Q ss_pred hccccCCceeeeecCChHHHHHHHHHHcCCCCCcchHHHHHHHHHHHHHHHHHhcCCCCCCChhhhhhhhhcchhHHHHH
Q psy15864 161 LYFIPESPHWLISQGRMQEASASLCWLRGWVTPDKVQTELSQITKAIEESELKRLGKDGQRRPNYRMYMRRTFLLPYAIV 240 (553)
Q Consensus 161 ~~~lpEsp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (553)
+++++|.|... .++..+ + ..+. .+.......+. ..++.+.+ ..+.+..
T Consensus 215 ~~~v~E~~~~~--~~~~~~--~---~~~~-~~~~~~~~~~~---------------------~i~~~~~~---mP~~m~~ 262 (477)
T TIGR01301 215 LSAVKENPLIG--SDDFIN--S---EAAP-PSKHGEEAFFG---------------------ELFGAFKY---LPRPVWI 262 (477)
T ss_pred eeeeeccCCCc--cccchh--h---hccc-ccccchhhhHH---------------------HHHHHHHH---CCHHHHH
Confidence 45588876311 000000 0 0000 00000000001 11111111 1222233
Q ss_pred HHHHHHHhhhhhHHHHhhHHHHHHh--hCCCC-------C----hHHHHHHHHHHHHHHHHHHhhhhcccCC-cceeecc
Q psy15864 241 TSLFFIGQFGGMTTLQTYAVGIFES--IHAPL-------D----PYFATLLLGVAELGGALLCVVLIHYTGK-RPLALIS 306 (553)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~~-------~----~~~~~~~~~i~~~~g~~~~g~l~dr~Gr-r~~l~~~ 306 (553)
.++..++.+.+++.+..|.+.+..+ ++.+. + ..+..++.++...+.+++..++.+++|+ |.+..++
T Consensus 263 l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~~l~~~s~~~~i~s~~l~~l~~~~g~~k~~~~~s 342 (477)
T TIGR01301 263 LLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQGAKYDDGVRAGAFGLMLNSVVLGITSIGMEKLCRGWGAGKRLWGIV 342 (477)
T ss_pred HHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHH
Confidence 3333444444555555566655543 11111 1 1244555666667777888889999995 5665777
Q ss_pred hhHHHHHHHHHHHHHHhhcc--c---------C-CCCChhHHHHHHHHHHHHhhhhccccceeeccccccc--hhhhhhh
Q psy15864 307 TGGSAACFIVVAVYAQFHLS--Y---------G-WDSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNN--IRATASG 372 (553)
Q Consensus 307 ~~~~~i~~~~~~~~~~~~~~--~---------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~--~Rg~~~~ 372 (553)
.++.+++++...+...+... . + ....+..++...+.|+..+. ...+|++++++..|.+ ..|..+|
T Consensus 343 ~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Gi~~A~-~~siPfal~s~~~~~~~~~~G~~mg 421 (477)
T TIGR01301 343 NIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVFAILGIPLAI-TYSIPFALASIRSSNLGAGQGLSMG 421 (477)
T ss_pred HHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHHHHhhHHHHH-HHHHhHHHHHHHccccCCCCcchhh
Confidence 77777777666544321100 0 0 00024555666666776644 4578899999999854 4488899
Q ss_pred HHHHHHHHHHHHHHHHhHHHHhhccc--hhhHHHHHHHHHHHHhhheEEcccCCC
Q psy15864 373 ASGSSSYIFAFAVNKLYYPMLDTFHL--WGTLYFYAAISVVGTLYMYFVMPETEG 425 (553)
Q Consensus 373 ~~~~~~~~~~~i~~~~~~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~~~pet~~ 425 (553)
+.|.+..+.+++.....|.+....+. ...+.+.++..++++++.++.+|.++.
T Consensus 422 ilN~~I~lpQii~sl~~g~~~~~~g~~~~~~~~~~gv~~~~aa~~~~~~~~~~~~ 476 (477)
T TIGR01301 422 VLNLAIVIPQIIVSLGSGPWDQLFGGGNLPAFVVGAVAAFVSGLLALILLPRPRV 476 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCCeeHHHHHHHHHHHHHHHHHHhCCCCCC
Confidence 99999999999999888876655542 234444455556666777778887653
No 125
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.33 E-value=1.5e-10 Score=112.53 Aligned_cols=272 Identities=11% Similarity=0.053 Sum_probs=175.4
Q ss_pred hhhhhccCcccccchhchhhhhHHHHHHHHHhhc------c----------------ccchHHHHHHHHHHHHHH-HHHh
Q psy15864 105 TYVAEITQPHLRGMLSATASMTTIFGTVSQLFLG------S----------------FLHWRSAAILNLLFPILA-LCAL 161 (553)
Q Consensus 105 ~~i~e~~p~~~Rg~~~~~~~~~~~lG~~l~~~l~------~----------------~lgWr~~f~i~~i~~li~-~i~~ 161 (553)
+++.+..++++-++..++-.....+|.++.-++. + ...=|..+.+.++.-++. +.++
T Consensus 138 s~L~~~~~k~~~~riS~lg~~~gylgs~i~li~~~~~~~~~~~~~~~~~l~~l~~~~~~~~ri~~~l~A~W~li~~iPm~ 217 (438)
T COG2270 138 SMLPRLTTKDNMGRISGLGWALGYLGSVILLIFVVLGFALGQQTGITIILLGLPPADGEDVRITGLLAALWWLLFALPMI 217 (438)
T ss_pred hHhhhhcCccccCcccccccccccccchHHHHHHHHHHhcccccceeEEeeccCccccccchhHHHHHHHHHHHHHhHHH
Confidence 7788888888888887776555555555443332 1 004688888877776665 5566
Q ss_pred ccccCCceeeeecCChHHHHHHHHHHcCCCCCcchHHHHHHHHHHHHHHHHHhcCCCCCCChhhhhhhhhcchhHHHHHH
Q psy15864 162 YFIPESPHWLISQGRMQEASASLCWLRGWVTPDKVQTELSQITKAIEESELKRLGKDGQRRPNYRMYMRRTFLLPYAIVT 241 (553)
Q Consensus 162 ~~lpEsp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (553)
+++++.++-. .... ......+++.... ++..+++.. +..+
T Consensus 218 ~~v~~~~~~~---~~~~---------------~~l~~g~k~L~~t------------------~k~i~~~~~----i~~F 257 (438)
T COG2270 218 LNVHDAEKIS---SPPP---------------TALRNGFKELKST------------------FKEIRGRKN----LVLF 257 (438)
T ss_pred hccccccccc---ccch---------------HHHHHHHHHHHHH------------------HHHHhcccc----hHHH
Confidence 6677655310 0000 0111112222221 222222222 2233
Q ss_pred HHHHHHhhhhhHHHHhhHHHHHH-hhCCCCC-hHHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHHHHHH
Q psy15864 242 SLFFIGQFGGMTTLQTYAVGIFE-SIHAPLD-PYFATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAACFIVVAV 319 (553)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~-~~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~ 319 (553)
.+..+.+..+...+..+...+-. .+|.+.. .........+.+++|++++|++.+|+|-|+++.+++++..+.++...+
T Consensus 258 LiA~~~~~DGv~til~~~~~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~~~~~~ 337 (438)
T COG2270 258 LIARFFYIDGVNTILAMGGVFGAADLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIAALYLIF 337 (438)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHHHHHHHHH
Confidence 33344444555555555555544 5566543 346666788999999999999999999999999888877777666555
Q ss_pred HHHhhcccCCCCChhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhHHHHhhccch
Q psy15864 320 YAQFHLSYGWDSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYYPMLDTFHLW 399 (553)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~~~g~~ 399 (553)
......+++..++.+.+.|..... .-.|.++++|++.-+..+|+.+..+...++++|++++.+.+-++..
T Consensus 338 ---------~~~~~~f~i~gll~g~s~G~~qA~-SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~ 407 (438)
T COG2270 338 ---------LEGELDFWILGLLVGTSLGGAQAS-SRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGSS 407 (438)
T ss_pred ---------ccccHHHHHHHHHHHHhcchHHHH-HHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhcch
Confidence 334445555556667666555443 3589999999999999999999999999999999999998887766
Q ss_pred hhHHHHHHHHHHHHhhheEEcccCCCC
Q psy15864 400 GTLYFYAAISVVGTLYMYFVMPETEGR 426 (553)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~~~pet~~~ 426 (553)
+.-....++.+++.++.+..+|..+.+
T Consensus 408 r~g~~~i~vll~iGl~~L~~v~~~~~~ 434 (438)
T COG2270 408 RAGVLSIIVLLLIGLLLLLRVKVPGRR 434 (438)
T ss_pred hhHHHHHHHHHHhhHhhEEeecCCCCc
Confidence 666555566666666667777766433
No 126
>KOG3764|consensus
Probab=99.33 E-value=5.9e-13 Score=127.10 Aligned_cols=269 Identities=9% Similarity=-0.002 Sum_probs=162.8
Q ss_pred ccccccccccch--hhhhhhhhccCcc-cccchhchhhhhHHHHHHHHHhhcccc----chHHHHHHHHHHHHHHHHHhc
Q psy15864 90 GTFLYKMAAPLV--LVLTYVAEITQPH-LRGMLSATASMTTIFGTVSQLFLGSFL----HWRSAAILNLLFPILALCALY 162 (553)
Q Consensus 90 gr~~~G~ga~~~--~~~~~i~e~~p~~-~Rg~~~~~~~~~~~lG~~l~~~l~~~l----gWr~~f~i~~i~~li~~i~~~ 162 (553)
.|.++|+|.+.. ...+++++.+|.+ +|++++|+...+.++|.++||.+++.+ |.+.+|++.++++++-..+.+
T Consensus 165 AR~LQgvgsA~~~tsglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l 244 (464)
T KOG3764|consen 165 ARSLQGVGSAFADTSGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGALQL 244 (464)
T ss_pred HHHHhhhhHHHHHhhhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHHHHHHHHHHHH
Confidence 456666665533 4458899999976 589999999999999999999999987 999999999999999887777
Q ss_pred cccCCceeeeecCChHHHHHHHHHHcCCCCCcchHHHHHHHHHHHHHHHHHhcCCCCCCChhhhhhhhhcchhHHHHHHH
Q psy15864 163 FIPESPHWLISQGRMQEASASLCWLRGWVTPDKVQTELSQITKAIEESELKRLGKDGQRRPNYRMYMRRTFLLPYAIVTS 242 (553)
Q Consensus 163 ~lpEsp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (553)
++-|.-+- +.+ .......+..+...++.. +..+
T Consensus 245 ~vi~p~~~-----~~~---------------------------------------~~~~~~~~~~Ll~dP~I~---~~ag 277 (464)
T KOG3764|consen 245 LVIEPTEM-----DPD---------------------------------------STEQGTPMWSLLMDPYIL---LIAG 277 (464)
T ss_pred heeCcccc-----Ccc---------------------------------------ccccCccHHHHHhCchHh---hhhc
Confidence 75332110 000 000112222233232221 1111
Q ss_pred HHHHHhhhhhHHHHhhHHHHH-HhhCCCC-ChHHHHHHHHHHHHHHHHHHhhhhcccCCcce--eecchhHHHHHHHHHH
Q psy15864 243 LFFIGQFGGMTTLQTYAVGIF-ESIHAPL-DPYFATLLLGVAELGGALLCVVLIHYTGKRPL--ALISTGGSAACFIVVA 318 (553)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~-~~~g~~~-~~~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~--l~~~~~~~~i~~~~~~ 318 (553)
...++. .....+-..++.+. +....+. ...+..+..++..++|+.+.|.++||++.-+. .+.++++..+++....
T Consensus 278 ai~~~n-~~lafLePtlslwm~e~m~~p~w~~G~~fLp~~~~y~ig~~lfg~la~k~~~~~wl~~~~gl~~~G~~~~~iP 356 (464)
T KOG3764|consen 278 AITFSN-SSLAFLEPTLSLWMLETMFTPGWEVGLAFLPASLSYAIGTNLFGKLADKYPHLRWLLSLGGLATVGVSSGPIP 356 (464)
T ss_pred chhhcc-chHHHhCcccHHHHHHhccCCCcceeeeecccccchhccCchHHHHHHhcCchhHHHHHHHHHHHHHHhchhH
Confidence 112222 22222222233333 3333222 33455667788899999999999999993332 2223232222222222
Q ss_pred HHHHhhcccCCCCChhHHHHHHHHHHH---Hhhhhccccceeeccccccc---hhhhhhhHHHHHHHHHHHHHHHHhHHH
Q psy15864 319 VYAQFHLSYGWDSPLVPTVFLVLAAFL---THICIRLLPWMLIGEVFPNN---IRATASGASGSSSYIFAFAVNKLYYPM 392 (553)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~e~~p~~---~Rg~~~~~~~~~~~~~~~i~~~~~~~~ 392 (553)
+ .++...+++..+..+++ ......|.. .++.|..... .-|...++......++.+++|.+.+.+
T Consensus 357 ~---------~~~~~~L~vp~~~l~~~i~~~dasl~P~l-~~lvd~rh~s~~~vYGsVyaIad~a~sla~a~GP~~gg~i 426 (464)
T KOG3764|consen 357 F---------ATSIAQLWVPNFGLGFGIGLADASLIPTL-GYLVDPRHVSGFNVYGSVYAIADAAFSLAYAIGPTFGGSL 426 (464)
T ss_pred h---------hhhHHHHhhhhHHHHHHHHHHHHHHhhhh-HHhcchhhccccceeeeHHHHHHHHHHHhhhccccccchh
Confidence 2 33333344333333333 333333443 4445544444 567888999999999999999999999
Q ss_pred HhhccchhhHHHHHHHHHHHHhhh
Q psy15864 393 LDTFHLWGTLYFYAAISVVGTLYM 416 (553)
Q Consensus 393 ~~~~g~~~~~~~~~~~~~~~~~~~ 416 (553)
.+..|+.|...++++..++...++
T Consensus 427 v~~iGF~wl~~iig~~n~iyapvl 450 (464)
T KOG3764|consen 427 VEAIGFEWLMTIIGILNLIYAPVL 450 (464)
T ss_pred eeehhHHHHHHHHHHHHHHHHHHH
Confidence 999998888888777777666544
No 127
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.33 E-value=1.3e-11 Score=126.55 Aligned_cols=164 Identities=13% Similarity=0.087 Sum_probs=123.7
Q ss_pred hhHHHHhhHHHHHHhhCCCCCh-HHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHHHHHHHHHhhcccCC
Q psy15864 251 GMTTLQTYAVGIFESIHAPLDP-YFATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAACFIVVAVYAQFHLSYGW 329 (553)
Q Consensus 251 ~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~ 329 (553)
....+...++.+.++.+.+... .+......++.+++.++.|+++||+|||++++++.++.+++.++... .
T Consensus 28 ~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~---------~ 98 (406)
T PRK15402 28 ANDMIQPGMLAVVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAFFILTCLAILL---------A 98 (406)
T ss_pred hhhhHhcchHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHH---------H
Confidence 3444444556666777765433 46667788899999999999999999999998888888777776655 4
Q ss_pred CCChhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhHHHHhhccchhhHHHHHHHH
Q psy15864 330 DSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYYPMLDTFHLWGTLYFYAAIS 409 (553)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~~~ 409 (553)
.+.+.+++.+++.+++.+... +..+.++.|.+|++.|+.+.++......++..++|.+.+.+.+..+|.+.+++.+++.
T Consensus 99 ~~~~~l~~~~~l~G~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~~w~~~~~~~~~~~ 177 (406)
T PRK15402 99 QSIEQFTLLRFLQGIGLCFIG-AVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIHVLPWRGMFVLFAALA 177 (406)
T ss_pred ccHHHHHHHHHHHHhHhhhHH-HHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHH
Confidence 456677777787777665443 3445788899999999998888888888888999998888888788777777777776
Q ss_pred HHHHhhheEEcccCC
Q psy15864 410 VVGTLYMYFVMPETE 424 (553)
Q Consensus 410 ~~~~~~~~~~~pet~ 424 (553)
++..+..++..||++
T Consensus 178 ~~~~~~~~~~~~~~~ 192 (406)
T PRK15402 178 ALSFFGLWRAMPETA 192 (406)
T ss_pred HHHHHHHHHhCCCCC
Confidence 666665556678764
No 128
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.33 E-value=1.7e-11 Score=128.04 Aligned_cols=120 Identities=12% Similarity=-0.020 Sum_probs=80.5
Q ss_pred HHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHHHHHHHHHhhcccCCCCChhHHHHHHHHHHHHhhhhccc
Q psy15864 274 FATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAACFIVVAVYAQFHLSYGWDSPLVPTVFLVLAAFLTHICIRLL 353 (553)
Q Consensus 274 ~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (553)
....+..++.+++.++.++++||+|+|+.+.+++++.+++.+.+...... ...+.+.+++..++.+++.+... +.
T Consensus 270 ~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~i~~~l~g~~~~~~~-~~ 344 (473)
T PRK10429 270 YYLSYAGAANLVTLILFPRLVKSLSRRILWAGASIFPVLSCGVLLLMGLA----APHNALLIVIAGILLNIGTALFW-VL 344 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhcc----CchhHHHHHHHHHHHHHHHHHHH-HH
Confidence 34445567888999999999999999999887777666555444332110 02233444455555555555444 44
Q ss_pred cceeeccccc-------cchhhhhhhHHHHHHHHHHHHHHHHhHHHHhhccc
Q psy15864 354 PWMLIGEVFP-------NNIRATASGASGSSSYIFAFAVNKLYYPMLDTFHL 398 (553)
Q Consensus 354 ~~~~~~e~~p-------~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~~~g~ 398 (553)
++++++|+.+ .+..|...|+..++..++..+++.+.+.+++..|+
T Consensus 345 ~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g~~l~~~Gy 396 (473)
T PRK10429 345 QVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIGVVLGLIGY 396 (473)
T ss_pred HHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 4588888855 23345577888888999999999999988765543
No 129
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.32 E-value=2.2e-11 Score=127.08 Aligned_cols=165 Identities=10% Similarity=-0.021 Sum_probs=115.5
Q ss_pred HHHhhhhhHHHHhhHHHHHHhhCCCCCh-HHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHHHHHHHHHh
Q psy15864 245 FIGQFGGMTTLQTYAVGIFESIHAPLDP-YFATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAACFIVVAVYAQF 323 (553)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~ 323 (553)
++..+...+....+.|.+.++.+.+... .+..+...++.+++.+++|+++||+|||+++.++.++.+++.++.++
T Consensus 45 ~~~~~~~~~~~~~~~~~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~~~~~~~~~---- 120 (476)
T PLN00028 45 FFTCFVSTFAAAPLLPIIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLTAPAVFCMSL---- 120 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHH----
Confidence 3334444455566777787778876433 35566677888999999999999999999988877777777666555
Q ss_pred hcccCCCCChhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhHHHHh----h----
Q psy15864 324 HLSYGWDSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYYPMLD----T---- 395 (553)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~----~---- 395 (553)
..+.+.+++.+++.|++.+.. .+. ..+++|.+|++.||.++|+.+....+++.+++.+.+.+.. .
T Consensus 121 -----~~s~~~l~~~r~l~G~~~~~~-~~~-~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~ 193 (476)
T PLN00028 121 -----VSSATGFIAVRFFIGFSLATF-VSC-QYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPS 193 (476)
T ss_pred -----hcCHHHHHHHHHHHHHHHHhh-HHH-HHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcc
Confidence 445666777777777766433 333 3578899999999999999988777777777666654432 1
Q ss_pred -ccchhhHHHHHHHHHHHHhhheEEc
Q psy15864 396 -FHLWGTLYFYAAISVVGTLYMYFVM 420 (553)
Q Consensus 396 -~g~~~~~~~~~~~~~~~~~~~~~~~ 420 (553)
.+|.+.+++.+++.++..++.+++.
T Consensus 194 ~~gWr~~f~i~g~l~l~~~l~~~~~~ 219 (476)
T PLN00028 194 FTAWRIAFFVPGLLHIIMGILVLTLG 219 (476)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHc
Confidence 3666777776766666555554443
No 130
>KOG0252|consensus
Probab=99.32 E-value=1.5e-12 Score=126.58 Aligned_cols=151 Identities=15% Similarity=0.059 Sum_probs=107.4
Q ss_pred HHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHHHHHHHHHhhcccCCCCChhHHHHHHHHHHHHhhhhccc
Q psy15864 274 FATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAACFIVVAVYAQFHLSYGWDSPLVPTVFLVLAAFLTHICIRLL 353 (553)
Q Consensus 274 ~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (553)
.+..+..+|.++|.++.|++.|++|||+++...+++++++.++.++... .+.+..-.+++.+.++++|++.|.=+ |+
T Consensus 88 ~Vn~~A~vGti~GQl~FG~lgD~~GRK~vYG~~liImIi~t~~~~~s~~--~~~~~~~m~~L~~~R~~LGiGIGGDY-Pl 164 (538)
T KOG0252|consen 88 LVNAAALVGTIFGQLFFGWLGDKFGRKKVYGKELIIMIICSALSGLSVG--TTSPLGVMMTLCFFRFLLGIGIGGDY-PL 164 (538)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcchhhhhHHHHHHHHHHHHhccCCC--CCCCcchhhHHHHHHHHhhccccCCC-cc
Confidence 5666778999999999999999999999999999999999885554211 11111234556778889998886665 66
Q ss_pred cceeeccccccchhhhhhhHHHHHHHHH---HHHHHHHhHHHHhh-----------ccchhhHHHHHHHHHHHHhhheEE
Q psy15864 354 PWMLIGEVFPNNIRATASGASGSSSYIF---AFAVNKLYYPMLDT-----------FHLWGTLYFYAAISVVGTLYMYFV 419 (553)
Q Consensus 354 ~~~~~~e~~p~~~Rg~~~~~~~~~~~~~---~~i~~~~~~~~~~~-----------~g~~~~~~~~~~~~~~~~~~~~~~ 419 (553)
..+.++|..-.+.||+..+....+...| +.+...+.....+. -+.|+..+.+++++++..+..-+.
T Consensus 165 SAtI~SE~an~~~RGa~iaavFa~Qg~GilaG~ivt~Iv~~~fe~~~~~~~~~~~ld~vWRl~~glg~vpa~~~ly~Rl~ 244 (538)
T KOG0252|consen 165 SATIMSESANKKTRGAFIAAVFAMQGFGILAGGIVALIVSAIFEKIFNGPSTYPHLDGVWRIIFGLGAVPALLVLYFRLK 244 (538)
T ss_pred hHHHhhhhhhhccccceeEEEEEecchhHhhccHHHHHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence 6699999999999999887655544333 33333333333221 134777778888888888888888
Q ss_pred cccCCCCC
Q psy15864 420 MPETEGRT 427 (553)
Q Consensus 420 ~pet~~~~ 427 (553)
+|||+...
T Consensus 245 M~Et~~Y~ 252 (538)
T KOG0252|consen 245 MPETARYT 252 (538)
T ss_pred CCcchhHH
Confidence 99996543
No 131
>KOG4686|consensus
Probab=99.32 E-value=3.7e-11 Score=109.37 Aligned_cols=256 Identities=12% Similarity=0.026 Sum_probs=148.0
Q ss_pred ccccccccccccchhh--hhhhhhccCcccccchhchhhhhHHHHHHHHHhhcccc----------------c-hHHHHH
Q psy15864 88 EKGTFLYKMAAPLVLV--LTYVAEITQPHLRGMLSATASMTTIFGTVSQLFLGSFL----------------H-WRSAAI 148 (553)
Q Consensus 88 ~~gr~~~G~ga~~~~~--~~~i~e~~p~~~Rg~~~~~~~~~~~lG~~l~~~l~~~l----------------g-Wr~~f~ 148 (553)
.-|||++|+|+....+ -.|+.-|+..++.+.++|+.....-+|..+-..+..++ | |-..-.
T Consensus 140 ~~GRF~FGIGgESlAVaQN~yav~wFKGKELn~vfGlqlSvAR~GstvNf~lm~~ly~~~~~~~~~~ghT~LG~~l~~~~ 219 (459)
T KOG4686|consen 140 LAGRFLFGIGGESLAVAQNKYAVYWFKGKELNFVFGLQLSVARLGSTVNFLLMPFLYDTMGRMFPGVGHTLLGLWLCFEV 219 (459)
T ss_pred HhhheeeccCchhhhhhhcceeEEEecCccccchhhHHHHHHHhhceeeeeecHHHHHHHHHhcccchHHHHHHHHHHHH
Confidence 4699999999974433 48899999999999999999888888876544433332 1 111111
Q ss_pred HHHHHHHHHHHHhccccCCceeeeecCChHHHHHHHHHHcCCCCCcchHHHHHHHHHHHHHHHHHhcCCCCCCChhhhhh
Q psy15864 149 LNLLFPILALCALYFIPESPHWLISQGRMQEASASLCWLRGWVTPDKVQTELSQITKAIEESELKRLGKDGQRRPNYRMY 228 (553)
Q Consensus 149 i~~i~~li~~i~~~~lpEsp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (553)
......+++++..-+. .+.|++.+.+-.+. ..+ ...+
T Consensus 220 ~tc~~slical~lg~~------------D~rAerilh~e~g~---------------------------~Ge----~pkL 256 (459)
T KOG4686|consen 220 KTCKQSLICALSLGLS------------DDRAERILHLEEGF---------------------------LGE----EPKL 256 (459)
T ss_pred HHHHHHHHHHHHhhhh------------hhHHHHHHhhhcCc---------------------------ccC----Cccc
Confidence 1111112221111111 11122221111000 000 0001
Q ss_pred hhhcchhHHHHHHHHHHHHhhhhhHHHHhhHHHHHH-hhCCCCCh-HHHHHHHHHHHHHHHHHHhhhhcccCCcceeecc
Q psy15864 229 MRRTFLLPYAIVTSLFFIGQFGGMTTLQTYAVGIFE-SIHAPLDP-YFATLLLGVAELGGALLCVVLIHYTGKRPLALIS 306 (553)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~-~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~ 306 (553)
....-..+.++..++..+.++.....+....|.+++ ..|++... ..+.+.......+.+++.|.++|++|++...+.+
T Consensus 257 tdv~~f~ppfw~~~iicv~yyva~fPFi~lg~~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~ 336 (459)
T KOG4686|consen 257 TDVNTFYPPFWVLVIICVLYYVAWFPFITLGPMFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLWWVAS 336 (459)
T ss_pred ccccccCccHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcceehhHHH
Confidence 111111122233333344444455555566666664 46776443 3555566666778888999999999998777665
Q ss_pred hhHHHHHHHHHHHHHHhhcccCCCCChhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHHHHH
Q psy15864 307 TGGSAACFIVVAVYAQFHLSYGWDSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVN 386 (553)
Q Consensus 307 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~ 386 (553)
..+..+..-...++ +.+-.++.+.+.|..+.....+. |..++-+.|.+.-|++.|.++.+.+++-.+.|
T Consensus 337 a~~~tl~~H~~l~F----------t~lsPy~~m~~lGLsysllAcsl-WP~va~~vpE~qLGTaygf~qsIqNLgla~i~ 405 (459)
T KOG4686|consen 337 ACILTLLGHSGLFF----------TFLSPYTSMTFLGLSYSLLACSL-WPCVASLVPEEQLGTAYGFIQSIQNLGLAFIP 405 (459)
T ss_pred HHHHHHHHhhhHHh----------hhccHHHHHHHHhhhHHHHHHHH-hhhhhhhCCHHHhcchHHHHHHHHhhhhhHHh
Confidence 54444333222221 12334555566666554443223 56778889999999999999999999999999
Q ss_pred HHhHHHHhhcc
Q psy15864 387 KLYYPMLDTFH 397 (553)
Q Consensus 387 ~~~~~~~~~~g 397 (553)
.+.+.+.+.-+
T Consensus 406 Iiag~i~d~~g 416 (459)
T KOG4686|consen 406 IIAGFIADGDG 416 (459)
T ss_pred hhhheeecCCC
Confidence 99999887655
No 132
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.32 E-value=6.9e-12 Score=126.94 Aligned_cols=165 Identities=9% Similarity=-0.019 Sum_probs=127.5
Q ss_pred hhhHHHHhhHHHHHHhhCCCCC-hHHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHHHHHHHHHhhcccC
Q psy15864 250 GGMTTLQTYAVGIFESIHAPLD-PYFATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAACFIVVAVYAQFHLSYG 328 (553)
Q Consensus 250 ~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~ 328 (553)
.....+....|.+.+..+.+.. ..+..++..++.+++.++.|+++||+|||++++++.++.+++.+++.+
T Consensus 9 ~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~--------- 79 (379)
T TIGR00881 9 LVRKNFALAMPYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGF--------- 79 (379)
T ss_pred HhHHhhhhhhHHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHH---------
Confidence 3344555666777777777643 457777888999999999999999999999999999888888887776
Q ss_pred CCCChhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHHHHHH-HhHHHHhhccchhhHHHHHH
Q psy15864 329 WDSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNK-LYYPMLDTFHLWGTLYFYAA 407 (553)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~-~~~~~~~~~g~~~~~~~~~~ 407 (553)
..+.+.+++.+++.+++.+... +...+++.|.+|++.|+.+.++.+....+++.+++. +.+.+....+|...+++.++
T Consensus 80 ~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (379)
T TIGR00881 80 STSLWVMAALWALNGIFQGMGW-PPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYSWHWVFIVPGI 158 (379)
T ss_pred hhhHHHHHHHHHHHHhhccccC-CchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhcCCchhHHHHHHH
Confidence 4567777888888887766554 444589999999999999999999999999999984 55555566676666766676
Q ss_pred HHHHHHhhheEEcccCC
Q psy15864 408 ISVVGTLYMYFVMPETE 424 (553)
Q Consensus 408 ~~~~~~~~~~~~~pet~ 424 (553)
+.++..++.+++.||++
T Consensus 159 ~~~~~~~~~~~~~~~~~ 175 (379)
T TIGR00881 159 IAIIVSLICFLLLRDSP 175 (379)
T ss_pred HHHHHHHHHheeeCCCc
Confidence 66666666677777754
No 133
>PRK03699 putative transporter; Provisional
Probab=99.30 E-value=2.9e-11 Score=123.37 Aligned_cols=171 Identities=10% Similarity=0.003 Sum_probs=126.2
Q ss_pred hHHHHHHHHHHHHhhhhhHHHHhhHHHHHHhhCCCCC-hHHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHH
Q psy15864 235 LPYAIVTSLFFIGQFGGMTTLQTYAVGIFESIHAPLD-PYFATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAAC 313 (553)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~ 313 (553)
++..+.+++.++........+...+|.+.++.+.+.. ..+......++.+++.+++|+++||+|||+++.++.++.+++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~i~ 85 (394)
T PRK03699 6 IKLTWISFLSYALTGALVIVTGMVMGPIAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQLIFGFALMILA 85 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 3444444444444444456677778888888777643 346667788899999999999999999999988888888777
Q ss_pred HHHHHHHHHhhcccCCCCChhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhHHHH
Q psy15864 314 FIVVAVYAQFHLSYGWDSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYYPML 393 (553)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~ 393 (553)
.++..+ .++.+.+++.+++.+++.+...... ..++.|.+|++.|+.+.++.+....+++.++|.+.+.+.
T Consensus 86 ~~l~~~---------~~~~~~~~~~~~l~G~~~g~~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~ 155 (394)
T PRK03699 86 VAGLMF---------SHSLALFSIAMFVLGVVSGITMSIG-TFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYLL 155 (394)
T ss_pred HHHHHH---------cchHHHHHHHHHHHHHhhHhhccch-hHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 777665 4566777778888888776665444 478899999999999998888888888889998888776
Q ss_pred h-hccchhhHHHHHHHHHHHHhh
Q psy15864 394 D-TFHLWGTLYFYAAISVVGTLY 415 (553)
Q Consensus 394 ~-~~g~~~~~~~~~~~~~~~~~~ 415 (553)
. ..+|...+.+.+++.++..++
T Consensus 156 ~~~~gw~~~f~~~~~~~~~~~~~ 178 (394)
T PRK03699 156 ARSIEWYWVYACIGLVYVAIFIL 178 (394)
T ss_pred hccccHHHHHHHHHHHHHHHHHH
Confidence 5 456666666666555544433
No 134
>KOG2615|consensus
Probab=99.30 E-value=1.4e-11 Score=117.21 Aligned_cols=270 Identities=14% Similarity=0.080 Sum_probs=143.7
Q ss_pred ccccccccccc-chhhhhhhhhccCcccccchhchhhhhHHHHHHHHHhhccccch------HHH----HHHHHHHHHH-
Q psy15864 89 KGTFLYKMAAP-LVLVLTYVAEITQPHLRGMLSATASMTTIFGTVSQLFLGSFLHW------RSA----AILNLLFPIL- 156 (553)
Q Consensus 89 ~gr~~~G~ga~-~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~lG~~l~~~l~~~lgW------r~~----f~i~~i~~li- 156 (553)
-.|++.|+.-+ +.++-++++|+++++.|+..++.+..++++|.++||.+|+++.- +.+ -++..+++..
T Consensus 126 ~aR~l~Gi~kgnl~v~rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~f~~~~g~~p~alP~~~v~i~a~~~ 205 (451)
T KOG2615|consen 126 LARFLGGIFKGNLSVIRAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQFSSISGSYPFALPCLLVFILAAGD 205 (451)
T ss_pred HHHHhhhhccCchHHHHHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHhhHhhhccCchHHHHHHHHHHHHHH
Confidence 35788888754 56788999999999999999999999999999999999988711 112 2333333333
Q ss_pred HHHHhccccCCceeeeecCChHHHHHHHHHHcCCCCCcchHHHHHHHHHHHHHHHHHhcCCCCCCChhhhhhhhhcchhH
Q psy15864 157 ALCALYFIPESPHWLISQGRMQEASASLCWLRGWVTPDKVQTELSQITKAIEESELKRLGKDGQRRPNYRMYMRRTFLLP 236 (553)
Q Consensus 157 ~~i~~~~lpEsp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (553)
.+.+.+++|||-+. +++.++.....+.. +...+..... . ......+.+.+...+
T Consensus 206 v~~~~~~lpETL~~---rk~~~~~~~~~~~~-------~~~~~~~~~~-~---------------~~~v~~lrn~p~~~~ 259 (451)
T KOG2615|consen 206 VTFFPWFLPETLPL---RKRNDEHSTLQEAA-------DDRLALLKFA-R---------------IFKVAALRNPPLLDF 259 (451)
T ss_pred HHHHHHhCCccccc---hhhcccccchhhhh-------hhhhhhcchh-h---------------hhhhhhhcCccccch
Confidence 34556779998432 11111100000000 0000000000 0 001111122222221
Q ss_pred --HHHHHHHHHHHhhhhhHHHHhhHHHHH-HhhCCCC-ChHHHHHHHHHHHHHHHHHHhhhhcccC--CcceeecchhHH
Q psy15864 237 --YAIVTSLFFIGQFGGMTTLQTYAVGIF-ESIHAPL-DPYFATLLLGVAELGGALLCVVLIHYTG--KRPLALISTGGS 310 (553)
Q Consensus 237 --~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~-~~~~~~~~~~i~~~~g~~~~g~l~dr~G--rr~~l~~~~~~~ 310 (553)
.+..+.+..+.+...+..+.++.+.+. +..|++. ++....+..++++.+..+...+..++.. -+..+..++..+
T Consensus 260 i~~~~i~~l~~~ly~~l~s~~~~t~~~l~~~rfg~ss~~~G~vl~~tGl~m~~~ql~~~~~l~~~~~~~~a~l~~~l~~~ 339 (451)
T KOG2615|consen 260 ISVLRIFGLHYFLYLELFSGLENTVLFLTHGRFGYSSMQQGKVLSTTGLLMLVIQLALVPILPRYKGNIKAVLLFSLLLI 339 (451)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHhhcCccCCChhhheeeeehhhHHHHHHHHhccccccccccchhhHHHHHHHHH
Confidence 111122222222222222222322221 2344443 3334444445554444444444555443 222222222222
Q ss_pred HHHHHHHHHHHHhhcccCCCCChhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhH
Q psy15864 311 AACFIVVAVYAQFHLSYGWDSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYY 390 (553)
Q Consensus 311 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~ 390 (553)
.-..+++.. .....+++++..+..+..+.....+. ..+....|+..||++.|+....+.++-+++|.+.|
T Consensus 340 vP~~llls~---------~~~~~~l~~~s~l~sf~~A~~vt~Lt-~Lv~~~~~~~qrG~~~Gi~~Sl~alaRaiGPlv~g 409 (451)
T KOG2615|consen 340 VPAFLLLSL---------ARTPVVLYLGSTLKSFSTASVVTCLT-SLVHKYGPQSQRGTLNGIFRSLGALARAIGPLVSG 409 (451)
T ss_pred HHHHHHHhc---------cccchhhhHHHHHHHHHHHHhhHHHH-HHHHhcCCcccchHHHHHHHHHHHHHHHhhhhhhh
Confidence 111111111 45566677777777776666665554 78888999999999999999999999999999888
Q ss_pred HHHh
Q psy15864 391 PMLD 394 (553)
Q Consensus 391 ~~~~ 394 (553)
.+..
T Consensus 410 ~i~~ 413 (451)
T KOG2615|consen 410 VIFS 413 (451)
T ss_pred eeEE
Confidence 7654
No 135
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.30 E-value=8.4e-12 Score=125.01 Aligned_cols=162 Identities=13% Similarity=0.031 Sum_probs=122.3
Q ss_pred hHHHHhhHH-HHHHhhCCCC-ChHHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHHHHHHHHHhhcccCC
Q psy15864 252 MTTLQTYAV-GIFESIHAPL-DPYFATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAACFIVVAVYAQFHLSYGW 329 (553)
Q Consensus 252 ~~~~~~~~~-~~~~~~g~~~-~~~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~ 329 (553)
........| .+.++.+.+. +..+...+..++.+++.++.|+++||+|||++++++.++.+++.++..+ .
T Consensus 12 ~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~---------~ 82 (352)
T PF07690_consen 12 FSIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLLAF---------A 82 (352)
T ss_dssp HHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHH---------H
T ss_pred HHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHhhh---------h
Confidence 344445555 5555666543 4557777888999999999999999999999999988888888544443 3
Q ss_pred CCChhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhHHHHhhccchhhHHHHHHHH
Q psy15864 330 DSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYYPMLDTFHLWGTLYFYAAIS 409 (553)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~~~ 409 (553)
.+.+.+++.+++.+++.+...... ..++.|.+|++.|+.+.++......++..+++.+.+.+.+..+|...+++.+++.
T Consensus 83 ~~~~~~~~~~~l~g~~~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~~~~~~~ 161 (352)
T PF07690_consen 83 SNFWLLLIARFLLGIGSGFFSPAS-NALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYFGWRWAFLISAILS 161 (352)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHH-HHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCHHCCHHHHHHHHH
T ss_pred hhHHHHhhhccccccccccccccc-cccccccchhhhhhhccccccchhhhhhhcccchhhhhhhccccccccccccchh
Confidence 455677888888888776665444 5899999999999999999999999999999999998887778777777777777
Q ss_pred HHHHhhheEEcccC
Q psy15864 410 VVGTLYMYFVMPET 423 (553)
Q Consensus 410 ~~~~~~~~~~~pet 423 (553)
++..++..+++++.
T Consensus 162 ~~~~il~~~~~~~~ 175 (352)
T PF07690_consen 162 LIAAILFILFLPEP 175 (352)
T ss_dssp HHHHHHHHCCC---
T ss_pred hhhhhhHhhhhhhc
Confidence 77766543444443
No 136
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.30 E-value=3.2e-11 Score=126.59 Aligned_cols=176 Identities=11% Similarity=-0.030 Sum_probs=117.8
Q ss_pred HHHHHHHHHHhhhhhHHHHhhHHHHHHhhCCCCCh--HHH-----HHHHHHHHHHHHHHHhhhhcccCCcceeecchhHH
Q psy15864 238 AIVTSLFFIGQFGGMTTLQTYAVGIFESIHAPLDP--YFA-----TLLLGVAELGGALLCVVLIHYTGKRPLALISTGGS 310 (553)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~--~~~-----~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~ 310 (553)
++...+.++.....+..+.+..|.+-+....+.+. .+. ..+..++..+|+++.|+++||+|||+++.++++++
T Consensus 18 ~~~~~~g~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~~l~ 97 (490)
T PRK10642 18 ITAASLGNAMEWFDFGVYGFVAYALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKYGRQKILAITIVIM 97 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHH
Confidence 33344444444444555555666555544322211 111 24455778899999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhcccCCCCCh--------hHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHH
Q psy15864 311 AACFIVVAVYAQFHLSYGWDSPL--------VPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFA 382 (553)
Q Consensus 311 ~i~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~ 382 (553)
+++.+++++ .++.. .+++++++.|++.+..+.+. .++++|.+|++.||...++......+|.
T Consensus 98 ~i~~~~~a~---------~~~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~-~~~~~e~~p~~~Rg~~~~~~~~~~~~G~ 167 (490)
T PRK10642 98 SISTFCIGL---------IPSYATIGIWAPILLLLCKMAQGFSVGGEYTGA-SIFVAEYSPDRKRGFMGSWLDFGSIAGF 167 (490)
T ss_pred HHHHHHHHh---------cccHHHHHHHHHHHHHHHHHHHHhHhHhhHHHH-HHHHHHhCCCCCCcHHHHHHHHHHHHHH
Confidence 999988887 33432 36778889898887776555 4899999999999999888877666666
Q ss_pred HHHHHHhHHHH--------hhccchhhHHHHHHHHHHHHhhheEEcccCC
Q psy15864 383 FAVNKLYYPML--------DTFHLWGTLYFYAAISVVGTLYMYFVMPETE 424 (553)
Q Consensus 383 ~i~~~~~~~~~--------~~~g~~~~~~~~~~~~~~~~~~~~~~~pet~ 424 (553)
.+++.+...+. ..++|+..+++.+ +..++.+++..++||+.
T Consensus 168 ~lg~~~~~~~~~~~~~~~~~~~gWR~~f~i~~-~~~l~~~~~~~~~~esp 216 (490)
T PRK10642 168 VLGAGVVVLISTIVGEANFLDWGWRIPFFIAL-PLGIIGLYLRHALEETP 216 (490)
T ss_pred HHHHHHHHHHHHhcCHHHhcCccHHHHHHHHH-HHHHHHHHHHHcCCCCh
Confidence 66665543332 2456666665544 33334444456788873
No 137
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.30 E-value=2.9e-11 Score=123.41 Aligned_cols=163 Identities=13% Similarity=0.024 Sum_probs=121.5
Q ss_pred hHHHHhhHHHHHHhhCCCCCh-HHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHHHHHHHHHhhcccCCC
Q psy15864 252 MTTLQTYAVGIFESIHAPLDP-YFATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAACFIVVAVYAQFHLSYGWD 330 (553)
Q Consensus 252 ~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~ 330 (553)
.......+|.+.++.+.+... .+......++.+++.++.|+++||+|||+.++++.++.+++.++... ..
T Consensus 24 ~~~~~p~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~---------~~ 94 (394)
T PRK11652 24 QTIYVPAIADMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFILGTLVALF---------AH 94 (394)
T ss_pred HHHHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHH---------Hc
Confidence 334444567777777776443 46677788999999999999999999999998888887777776654 44
Q ss_pred CChhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhHHHHhhccchhhHHHHHHHHH
Q psy15864 331 SPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYYPMLDTFHLWGTLYFYAAISV 410 (553)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~~~~ 410 (553)
+.+.+++.+++.+++.+... +....+..|.++.+.|+.+.++......++..++|.+.+.+.+..+|...+.+.+++.+
T Consensus 95 ~~~~l~~~~~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~f~~~~~~~~ 173 (394)
T PRK11652 95 SLTVLIAASAIQGLGTGVGG-VMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTLFGWRACYLFLLLLGA 173 (394)
T ss_pred cHHHHHHHHHHHHhhhhHHH-HHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHH
Confidence 56677777888777665443 33346778888888899999988888888888999888888887787777777666665
Q ss_pred HHHhhheEEcccCC
Q psy15864 411 VGTLYMYFVMPETE 424 (553)
Q Consensus 411 ~~~~~~~~~~pet~ 424 (553)
+..++.+++.||++
T Consensus 174 ~~~~~~~~~~~~~~ 187 (394)
T PRK11652 174 GVTFSMARWMPETR 187 (394)
T ss_pred HHHHHHHHhCCccC
Confidence 55555556678764
No 138
>PTZ00207 hypothetical protein; Provisional
Probab=99.30 E-value=5.4e-11 Score=124.29 Aligned_cols=322 Identities=13% Similarity=0.093 Sum_probs=177.7
Q ss_pred cccccccccc--chhhhhhhhhccCcccccchhchhhhhHHHHHHH-HHhhcccc--chHHHHHHHHHHHHHHHHHh-cc
Q psy15864 90 GTFLYKMAAP--LVLVLTYVAEITQPHLRGMLSATASMTTIFGTVS-QLFLGSFL--HWRSAAILNLLFPILALCAL-YF 163 (553)
Q Consensus 90 gr~~~G~ga~--~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~lG~~l-~~~l~~~l--gWr~~f~i~~i~~li~~i~~-~~ 163 (553)
.|++.|+|.+ .+.+..++.+|+| ++||++.++..++.++|.++ +++...++ +|++.|++.+++++++.+++ ++
T Consensus 126 ~r~l~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~~~~~~~fl~l~vl~~vv~ll~~~~ 204 (591)
T PTZ00207 126 YNGLMTLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFFSDNTSAYFFFLMSFALVVGILAIVF 204 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhh
Confidence 4667777764 3356677889986 78999999999999999986 44444444 89999988888887764433 33
Q ss_pred --ccCCceeeeecCChHHHHHHHHHHcCC----CCCc--ch------------------------------HHHHHH--H
Q psy15864 164 --IPESPHWLISQGRMQEASASLCWLRGW----VTPD--KV------------------------------QTELSQ--I 203 (553)
Q Consensus 164 --lpEsp~~l~~~~~~~~a~~~l~~~~~~----~~~~--~~------------------------------~~~~~~--~ 203 (553)
.|++|++...+++.++.++..++..+. ...+ .. ...... +
T Consensus 205 vr~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~q~~p~~~f~~~~~i~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~v~~ 284 (591)
T PTZ00207 205 MRLPPFHLTGYQEKHLDEEEKAQRLMRKGVYLKQKAPMWRFVYGFVILIILIVFLPLQGALVAYLKLGSNFKVGFAVTVI 284 (591)
T ss_pred eeCCcchhhcccccCCCHHHHHHHhhhhhhhhhcCCCceehhhHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHH
Confidence 466666654444444443332222111 0000 00 000000 0
Q ss_pred --HHHHH-----HHHHH----h-c----------------CCCC-------C-CChhhh-hhhhhcchhHHHHHHHHHHH
Q psy15864 204 --TKAIE-----ESELK----R-L----------------GKDG-------Q-RRPNYR-MYMRRTFLLPYAIVTSLFFI 246 (553)
Q Consensus 204 --~~~~~-----~~~~~----~-~----------------~~~~-------~-~~~~~~-~~~~~~~~~~~~~~~~~~~~ 246 (553)
.-... ..... . . ..+. . ..+... .+... ....=+|+.+..++
T Consensus 285 ~lll~~p~l~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~t~~q~-l~~~d~Wll~~~~~ 363 (591)
T PTZ00207 285 VLTVIFPFMAFPLTTFDGKRPHDDSDGKAKEHVEAGEEVSAAEDKVVETDVDYIAPQFQETFIEG-LKTARLWCLLWSIF 363 (591)
T ss_pred HHHHHHHHHhhhHHHhccCCcCCCccccccccccccccccccccccccccccCCCCCCcchHHHH-HhchhHHHHHHHHH
Confidence 00000 00000 0 0 0000 0 000000 11111 11122344444444
Q ss_pred HhhhhhHHHHhhHHHHHHhh-CCCCCh--H-HHHHHHHHHHHHHHHHHhhhhcccCCcc----e-----eecchhHHHHH
Q psy15864 247 GQFGGMTTLQTYAVGIFESI-HAPLDP--Y-FATLLLGVAELGGALLCVVLIHYTGKRP----L-----ALISTGGSAAC 313 (553)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~-g~~~~~--~-~~~~~~~i~~~~g~~~~g~l~dr~Grr~----~-----l~~~~~~~~i~ 313 (553)
+..+.-.....-+.++.+.. |.+.+. . ...++.+++..+|-+.+|++....-+|+ + +.+..+ +.++
T Consensus 364 cg~g~gl~~~~N~~qI~~sl~g~~~~~~~~~~~vsL~si~~~~GRl~~g~~~~~~~~~~~~~r~prt~~l~~~~~-~~~~ 442 (591)
T PTZ00207 364 CCVGAHFVIIFNARFIYTALAGEAPDDALNTLLTVLNGVGSAVGRLCMSYFEIWSQKRRAEDRVPITIALFIPSV-CIIT 442 (591)
T ss_pred HhhCchheeeecHHHHHHHhcCCCCCccceeeehhhhhHHHHhhHHHHHHHHHHHHhhccccccchhHHHHHHHH-HHHH
Confidence 44444455556666777776 663322 2 2677889999999999998873322222 1 112222 3333
Q ss_pred HHHHHHHHHhhcccCCCCChhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHHHH-HHHhHHH
Q psy15864 314 FIVVAVYAQFHLSYGWDSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAV-NKLYYPM 392 (553)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~-~~~~~~~ 392 (553)
.+++++ ......+++..++.|++.|..+...+ +.++|+|. +.-|+-.-+.....-+|+++. ..+.|.+
T Consensus 443 ~lll~~---------~~p~~~L~~~~~lvg~~~G~~~~~~~-~i~selFg-k~~g~~yN~~~~a~pigs~~~n~~l~G~~ 511 (591)
T PTZ00207 443 MLTLFL---------TLPKAALPLPYFIAAFANGFMAATIA-LVTRTIFA-KDPAKHYNFCFLGSVLSAIFLNRLLYGEW 511 (591)
T ss_pred HHHHHH---------HCCccHhHHHHHHHHHHhhHhHHHHH-HHHHHHhc-cchHHHhhHHhHHHHHHHHHHHHHHHHHH
Confidence 333333 22225678888899999988887765 88899999 666887776666666666665 4556666
Q ss_pred Hhhc-------------cchhhHHHHHHHHHHHHhhheEEcccCCC
Q psy15864 393 LDTF-------------HLWGTLYFYAAISVVGTLYMYFVMPETEG 425 (553)
Q Consensus 393 ~~~~-------------g~~~~~~~~~~~~~~~~~~~~~~~pet~~ 425 (553)
++.- -...+++++++++++.+++...+.-+|++
T Consensus 512 Yd~ea~k~~~~~C~G~~C~~~~~~v~~~~~~~g~~~s~~l~~R~r~ 557 (591)
T PTZ00207 512 YTQQADKLGQDVCTERVCVVMPLAFLLGLSFLAFITSTYVHLQYRR 557 (591)
T ss_pred HHHHHhhCCCCeeCCceeeHhHHHHHHHHHHHHHHHHhheeeehHH
Confidence 6432 13557788888888887776665555543
No 139
>PRK10054 putative transporter; Provisional
Probab=99.30 E-value=2.3e-11 Score=123.91 Aligned_cols=168 Identities=9% Similarity=-0.014 Sum_probs=118.0
Q ss_pred HHHhhhhhHHHHhhHHHHHH-hhCCCC-ChHHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHHHHHHHHH
Q psy15864 245 FIGQFGGMTTLQTYAVGIFE-SIHAPL-DPYFATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAACFIVVAVYAQ 322 (553)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~-~~g~~~-~~~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~ 322 (553)
.+....+......+++.++. ..|.+. +..+..++..++.+++.++.|+++||+|||++++++.++.+++.+++.+
T Consensus 16 ~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~~~~~~~--- 92 (395)
T PRK10054 16 SLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFASGFIAIPL--- 92 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHH---
Confidence 34444455555556666554 457654 3346666777888999999999999999999998888877777766655
Q ss_pred hhcccCCCCChhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhHHHHhhccchhhH
Q psy15864 323 FHLSYGWDSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYYPMLDTFHLWGTL 402 (553)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~~~g~~~~~ 402 (553)
.++.+.+++++++.+.+.+.. .+....+..|.+|++.|+++.|+.+....++..++|.+.+.+.. .+|...+
T Consensus 93 ------~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~-~g~~~~f 164 (395)
T PRK10054 93 ------VNNVTLVVLFFALINCAYSVF-STVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVM-QSINLPF 164 (395)
T ss_pred ------HhHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hccCcHH
Confidence 334455555555555544333 34445788999999999999999999999999999999888764 5766666
Q ss_pred HHHHHHHHHHHhhheEEcccC
Q psy15864 403 YFYAAISVVGTLYMYFVMPET 423 (553)
Q Consensus 403 ~~~~~~~~~~~~~~~~~~pet 423 (553)
.+.+++.++..++.++++|+.
T Consensus 165 ~~~~~~~~i~~i~~~~~~~~~ 185 (395)
T PRK10054 165 WLAAICSAFPLVFIQIWVQRS 185 (395)
T ss_pred HHHHHHHHHHHHHHHHHHhcc
Confidence 666655555544454556654
No 140
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.28 E-value=4.4e-11 Score=125.07 Aligned_cols=146 Identities=18% Similarity=0.045 Sum_probs=110.4
Q ss_pred ChHHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHHHHHHHHHhhcccCCCCChhHHHHHHHHHHHHhhhh
Q psy15864 271 DPYFATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAACFIVVAVYAQFHLSYGWDSPLVPTVFLVLAAFLTHICI 350 (553)
Q Consensus 271 ~~~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (553)
+..+..++..++.+++.++.|+++||+|||++++++.++.+++.++..+... ..+.+.+++.+++.|++.+...
T Consensus 72 ~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~r~l~G~~~~~~~ 145 (481)
T TIGR00879 72 LWGLVVSIFLVGGFIGALFAGWLSDRFGRKKSLLIIALLFVIGAILMGLAAF------ALSVEMLIVGRVLLGIGVGIAS 145 (481)
T ss_pred HHHHHHHHHHHHHHHHHHHhhHhhhhhhhHHHHHHHHHHHHHHHHHHHHhcc------ccchHHHHHHHHHHHhhhhHHH
Confidence 3457777888999999999999999999999999988888888777755221 2233467788888888776665
Q ss_pred ccccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHh---HHHHhhccchhhHHHHHHHHHHHHhhheEEcccCC
Q psy15864 351 RLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLY---YPMLDTFHLWGTLYFYAAISVVGTLYMYFVMPETE 424 (553)
Q Consensus 351 ~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~---~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~pet~ 424 (553)
... .++++|.+|++.|+.++++.+....+|.++++.+. .......+|.+.+++ .++..+..++..+++||+.
T Consensus 146 ~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~w~~~f~~-~~~~~~~~~~~~~~l~~~~ 220 (481)
T TIGR00879 146 ALV-PMYLSEIAPKALRGALTSLYQLAITFGILVAYGFGSGKVSLNNTLGWRIPLGL-QLIPAGLLFLGLFFLPESP 220 (481)
T ss_pred hHH-HHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHH-HHHHHHHHHHHHhcCCCCh
Confidence 444 58999999999999999999999999999998877 443355566555555 4444455555566788863
No 141
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.28 E-value=1.9e-11 Score=123.02 Aligned_cols=156 Identities=12% Similarity=-0.029 Sum_probs=115.3
Q ss_pred HHhhHHHHHHhhCCCC-ChHHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHHHHHHHHHhhcccCCCCCh
Q psy15864 255 LQTYAVGIFESIHAPL-DPYFATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAACFIVVAVYAQFHLSYGWDSPL 333 (553)
Q Consensus 255 ~~~~~~~~~~~~g~~~-~~~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 333 (553)
....+|.+..+.+.+. +..+...+..++.+++.++.|+++||+|||++++++.++..++.+++.+.... ...+.+
T Consensus 18 ~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~ 93 (365)
T TIGR00900 18 TQVALPLYVLAGTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLPFVALL----GGLNIW 93 (365)
T ss_pred HHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHc----CCCcHH
Confidence 3344455555545442 33466777888999999999999999999999998888777777666553210 012567
Q ss_pred hHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhHHHHhhccchhhHHHHHHHHHHHH
Q psy15864 334 VPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYYPMLDTFHLWGTLYFYAAISVVGT 413 (553)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 413 (553)
.+++.+++.+++.+....+. .+++.|++|++.|+.+.++......++.++++.+.+.+.+..+|...+++.++..++..
T Consensus 94 ~~~~~~~l~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~ 172 (365)
T TIGR00900 94 QVYVLAGILAIAQAFFTPAY-QAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATLGIKWAIWVDAVGFAISA 172 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHH-HHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 77788888887776655444 58999999999999999999999999999999999998888887766666555444443
Q ss_pred hh
Q psy15864 414 LY 415 (553)
Q Consensus 414 ~~ 415 (553)
++
T Consensus 173 ~~ 174 (365)
T TIGR00900 173 LL 174 (365)
T ss_pred HH
Confidence 33
No 142
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.28 E-value=2.6e-11 Score=122.37 Aligned_cols=172 Identities=16% Similarity=0.067 Sum_probs=121.5
Q ss_pred HHHHHHHhhhhhHHHHhhHHH-HHHhhCCCCCh-HHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHHHHH
Q psy15864 241 TSLFFIGQFGGMTTLQTYAVG-IFESIHAPLDP-YFATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAACFIVVA 318 (553)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~-~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~ 318 (553)
.++.++..+........+.|. +.++.+.+... .+...+..++.+++.+++|+++||+|||+.++++.++.+++.+++.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~~~~ 85 (366)
T TIGR00886 6 SWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCLWAG 85 (366)
T ss_pred HHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHH
Confidence 333444455556667777775 55667776433 4777788899999999999999999999999999988888887776
Q ss_pred HHHHhhcccCCC-CChhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhHHHHhh--
Q psy15864 319 VYAQFHLSYGWD-SPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYYPMLDT-- 395 (553)
Q Consensus 319 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~~-- 395 (553)
+ .. +.+.+++.+++.+++.+ .+.+. ..++++.+|++.|+.+.++...+..++..+++.+.+.+...
T Consensus 86 ~---------~~~~~~~~~~~~~~~g~~~~-~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~ 154 (366)
T TIGR00886 86 L---------AVQSYSVLLLLRLFIGIAGG-SFASC-MPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGSLI 154 (366)
T ss_pred H---------HhhhHHHHHHHHHHHHHhch-hhHhH-HHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Confidence 6 34 56677777888777643 33333 47889999999999999998877778877777776665542
Q ss_pred --------ccchhhH-HHHHHHHHHHHhhheEEcccC
Q psy15864 396 --------FHLWGTL-YFYAAISVVGTLYMYFVMPET 423 (553)
Q Consensus 396 --------~g~~~~~-~~~~~~~~~~~~~~~~~~pet 423 (553)
.+|.+.+ +..+++..+..++.+++.+++
T Consensus 155 ~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (366)
T TIGR00886 155 FGAGLPAHLAWGWAFVIVPAGILLLPALLIFFVGADT 191 (366)
T ss_pred hcccccccccccchhHHHHHHHHHHHHHHHHHhcccC
Confidence 2555555 333444444444444555554
No 143
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.28 E-value=2.9e-11 Score=125.15 Aligned_cols=179 Identities=13% Similarity=0.010 Sum_probs=123.2
Q ss_pred HHHHHHHHHHhhhhhHHHHhhHHHHHHhhCCCCC-hHHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHHH
Q psy15864 238 AIVTSLFFIGQFGGMTTLQTYAVGIFESIHAPLD-PYFATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAACFIV 316 (553)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~ 316 (553)
++..++..+..+.....+....|.+.+ .+.+.. ..+...+..++.+++.++.|+++||+|||+++.++.++.+++.++
T Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~p~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~ 107 (438)
T TIGR00712 29 FLGIFFGYAAYYLVRKNFALAMPYLVE-QGFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSAAVMLL 107 (438)
T ss_pred HHHHHHHHHHHHHHhccHHhhhHHHHH-cCCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCceehHHHHHHHHHHHHH
Confidence 333433344444434444555565554 466544 347777888999999999999999999999988888777777766
Q ss_pred HHHHHHhhcccCCCCChhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhHHHHh-h
Q psy15864 317 VAVYAQFHLSYGWDSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYYPMLD-T 395 (553)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~-~ 395 (553)
+...... ..+.+.+++.+++.+++.+..+.+.. .++.|.+|++.|++++++.+....+++.+++.+.+.... .
T Consensus 108 ~~~~~~~-----~~~~~~l~~~~~l~g~~~g~~~~~~~-~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~ 181 (438)
T TIGR00712 108 MGFVPWA-----TSSIAIMFVLLFLNGWFQGMGWPPCG-RTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAWF 181 (438)
T ss_pred Hhccccc-----cchHHHHHHHHHHHHHHhhcchHHHH-HHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHHh
Confidence 5442110 12334455666777776665554443 777899999999999999999999999998888776554 3
Q ss_pred ccchhhHHHHHHHHHHHHhhheEEcccC
Q psy15864 396 FHLWGTLYFYAAISVVGTLYMYFVMPET 423 (553)
Q Consensus 396 ~g~~~~~~~~~~~~~~~~~~~~~~~pet 423 (553)
.+|...+++.+++.++..++.++++||+
T Consensus 182 ~~w~~~f~~~~~~~~i~~~~~~~~~~~~ 209 (438)
T TIGR00712 182 NDWHAALYFPAICAIIVALFAFAMMRDT 209 (438)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHhccCC
Confidence 5666666666776666666666677775
No 144
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.28 E-value=5e-11 Score=123.82 Aligned_cols=165 Identities=13% Similarity=0.019 Sum_probs=114.0
Q ss_pred HHHHhhHHHHHHhhCCCCC-hHHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHHHHHHHHHhhcccCCCC
Q psy15864 253 TTLQTYAVGIFESIHAPLD-PYFATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAACFIVVAVYAQFHLSYGWDS 331 (553)
Q Consensus 253 ~~~~~~~~~~~~~~g~~~~-~~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 331 (553)
..+...+|.+.+. +.+.. ..+......++.+++.+++|+++||+|||++++++.++.+++.+++.+... ...+
T Consensus 46 ~~~~~~~p~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~~i~~~~~~~~~~-----~~~~ 119 (452)
T PRK11273 46 KNFALAMPYLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPW-----ATSS 119 (452)
T ss_pred HHHHHhhHHHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHHHHHHHHHHhhhc-----cccc
Confidence 3345566766655 66543 346677788999999999999999999999999988888888776665321 0224
Q ss_pred ChhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHh-HHHHhhccchhhHHHHHHHHH
Q psy15864 332 PLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLY-YPMLDTFHLWGTLYFYAAISV 410 (553)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~-~~~~~~~g~~~~~~~~~~~~~ 410 (553)
.+.+++.+++.+++.+....+.. ..+.+.+|++.|++++|+.+....+++.+++++. ..+....+|...+++.+++.+
T Consensus 120 ~~~~~~~~~l~gi~~g~~~~~~~-~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~gw~~~f~i~~~~~~ 198 (452)
T PRK11273 120 IAVMFVLLFLCGWFQGMGWPPCG-RTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWFNDWHAALYMPAFAAI 198 (452)
T ss_pred HHHHHHHHHHHHHHHhccchHHH-HHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 45566677777777665544443 6678899999999999998888888765444443 233233466666666666666
Q ss_pred HHHhhheEEcccCC
Q psy15864 411 VGTLYMYFVMPETE 424 (553)
Q Consensus 411 ~~~~~~~~~~pet~ 424 (553)
+..++.++++||+.
T Consensus 199 ~~~~l~~~~~~~~~ 212 (452)
T PRK11273 199 LVALFAFAMMRDTP 212 (452)
T ss_pred HHHHHHHHHccCCH
Confidence 66666666777753
No 145
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.27 E-value=2.7e-11 Score=127.68 Aligned_cols=176 Identities=12% Similarity=0.007 Sum_probs=130.0
Q ss_pred HHHHHHHHHHHhhhhhHHHHhhHHHHHHhhCCCCC-hHHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHH
Q psy15864 237 YAIVTSLFFIGQFGGMTTLQTYAVGIFESIHAPLD-PYFATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAACFI 315 (553)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~ 315 (553)
.+..+++..+........+....|.+.++.+.+.. ..+......++.+++.++.|+++||+|||++++++.++.+++.+
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~ 100 (496)
T PRK03893 21 AFSAAWLGYLLDGFDFVLITLVLTEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLAMVISIVLFSVGTL 100 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHH
Confidence 33344444444455555666677777777777643 34667778889999999999999999999999988888888887
Q ss_pred HHHHHHHhhcccCCCCChhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhHHHHhh
Q psy15864 316 VVAVYAQFHLSYGWDSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYYPMLDT 395 (553)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~~ 395 (553)
++.+ ..+.+.+++.+++.+++.+...... ..++.|.+|++.|+.+.++......++..+++.+.+.+.+.
T Consensus 101 ~~~~---------~~~~~~l~~~~~l~G~~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~ 170 (496)
T PRK03893 101 ACGF---------APGYWTLFIARLVIGMGMAGEYGSS-ATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLVVPV 170 (496)
T ss_pred HHHH---------HhHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 7766 4466777888888888766555444 48889999999999999999999999999999999988887
Q ss_pred ccchhhHHHHHHHHHHHHhhheEEcccC
Q psy15864 396 FHLWGTLYFYAAISVVGTLYMYFVMPET 423 (553)
Q Consensus 396 ~g~~~~~~~~~~~~~~~~~~~~~~~pet 423 (553)
.+|.+.+++ +++.++..++....+||+
T Consensus 171 ~~w~~~f~~-~~~~~~~~~~~~~~~p~~ 197 (496)
T PRK03893 171 WGWRALFFI-GILPIIFALWLRKNLPEA 197 (496)
T ss_pred CCHHHHHHH-HHHHHHHHHHHHHhCCCc
Confidence 776665554 333333333344456664
No 146
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.27 E-value=5.3e-11 Score=122.05 Aligned_cols=166 Identities=13% Similarity=0.045 Sum_probs=122.3
Q ss_pred HhhhhhHHHHhhHHHHHHhhCCCCCh------HHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHHHHHHH
Q psy15864 247 GQFGGMTTLQTYAVGIFESIHAPLDP------YFATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAACFIVVAVY 320 (553)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~g~~~~~------~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~ 320 (553)
....+......++|.+.++.+.+... .+...+..++.+++.++.|+++||+|||++++++.++.+++.+++..
T Consensus 25 ~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~- 103 (408)
T PRK09874 25 LTGAAFSLVMPFLPLYVEQLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIMLLRSALGMGIVMVLMGL- 103 (408)
T ss_pred HHHHHHHHhhhhHHHHHHHhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHHHHHHHHHHHHHHHHHH-
Confidence 33344455566778887777765332 34455677888899999999999999999998888777777766554
Q ss_pred HHhhcccCCCCChhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhHHHHhhccchh
Q psy15864 321 AQFHLSYGWDSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYYPMLDTFHLWG 400 (553)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~~~g~~~ 400 (553)
..+.+.+++.+++.+++.+ ..+....++.+.+|++.|+.+.++......++.++++.+.+.+.+..+|..
T Consensus 104 --------~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~ 173 (408)
T PRK09874 104 --------AQNIWQFLILRALLGLLGG--FVPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGGLLADSYGLRP 173 (408)
T ss_pred --------HhhHHHHHHHHHHHHHhhh--hHHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHH
Confidence 4456677777777776543 233444677889999999999999999899999999999998888888777
Q ss_pred hHHHHHHHHHHHHhhheEEcccC
Q psy15864 401 TLYFYAAISVVGTLYMYFVMPET 423 (553)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~pet 423 (553)
.+++.+++.++..++.++++|+.
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~ 196 (408)
T PRK09874 174 VFFITASVLFLCFLVTLFCIREN 196 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHhccC
Confidence 77777666666666555666664
No 147
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.27 E-value=2e-11 Score=123.69 Aligned_cols=159 Identities=13% Similarity=0.061 Sum_probs=125.8
Q ss_pred HhhHHHHHHhhCCCCC-hHHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHHHHHHHHHhhcccCCCCChh
Q psy15864 256 QTYAVGIFESIHAPLD-PYFATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAACFIVVAVYAQFHLSYGWDSPLV 334 (553)
Q Consensus 256 ~~~~~~~~~~~g~~~~-~~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 334 (553)
...+|.+.++.+.+.. ..+...+..++.+++.++.|+++||+|||+++..+.++.+++.+++.. ..+.+.
T Consensus 11 ~p~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~---------~~~~~~ 81 (377)
T PRK11102 11 LPALPVIAADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACAL---------AQTIDQ 81 (377)
T ss_pred hccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHH---------HccHHH
Confidence 3556667777776543 346677788999999999999999999999999988888888877765 445667
Q ss_pred HHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhHHHHhhccchhhHHHHHHHHHHHHh
Q psy15864 335 PTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYYPMLDTFHLWGTLYFYAAISVVGTL 414 (553)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 414 (553)
+++.+++.+++.+...... ..++.|.+|++.|++++++.+....++..++|.+.+.+.+..+|...+.+.+++.++..+
T Consensus 82 ~~~~~~l~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 160 (377)
T PRK11102 82 LIYMRFLHGLAAAAASVVI-NALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFSWHAIFWVLALAAILAAA 160 (377)
T ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHH
Confidence 7777888887766554444 488899999999999999999999999999999999888888877777777777766666
Q ss_pred hheEEcccCC
Q psy15864 415 YMYFVMPETE 424 (553)
Q Consensus 415 ~~~~~~pet~ 424 (553)
+.++++||+.
T Consensus 161 ~~~~~~~~~~ 170 (377)
T PRK11102 161 LVFFFIPETL 170 (377)
T ss_pred HHHHhCCccC
Confidence 6666777763
No 148
>KOG1330|consensus
Probab=99.26 E-value=3.5e-12 Score=124.65 Aligned_cols=179 Identities=9% Similarity=-0.043 Sum_probs=141.4
Q ss_pred HHHHHHHHHHHhhhhhHHHHhhHHHHHHhhCCCCC-hHHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHH
Q psy15864 237 YAIVTSLFFIGQFGGMTTLQTYAVGIFESIHAPLD-PYFATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAACFI 315 (553)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~ 315 (553)
.++.+++........-+.+...++.+....+.+.+ ..+......++.++.++++|+++||+.|++++.+|..+..++.+
T Consensus 34 ~l~il~~vnlmny~Dr~~iagv~~~v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~iW~~Av~ 113 (493)
T KOG1330|consen 34 TLVILCLVNLMNYADRYTIAGVLKEVQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIFIWTLAVF 113 (493)
T ss_pred HHHHHHHHHHHHHhhhhhhhhhhHHHHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHHHHHHHHH
Confidence 34455555666666677777766666666666543 34777788899999999999999999999999999999999998
Q ss_pred HHHHHHHhhcccCCCCChhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhHHHHhh
Q psy15864 316 VVAVYAQFHLSYGWDSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYYPMLDT 395 (553)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~~ 395 (553)
+.++ ....|.+.+.+.+.|++-+.. .++...+++|++|...|++++++.++...+|+.++-.....+...
T Consensus 114 ~~~f---------s~~Fwq~~l~R~~vGiGeAs~-~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~ 183 (493)
T KOG1330|consen 114 ASGF---------SNHFWQVLLCRGFVGIGEASY-SPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASL 183 (493)
T ss_pred HHHH---------HHHHHHHHHHHHHhccchhhh-cccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccC
Confidence 8888 446788889999999987544 455569999999999999999999999999888877666666665
Q ss_pred cc-chhhHHHHHHHHHHHHhhheEEcccCCC
Q psy15864 396 FH-LWGTLYFYAAISVVGTLYMYFVMPETEG 425 (553)
Q Consensus 396 ~g-~~~~~~~~~~~~~~~~~~~~~~~pet~~ 425 (553)
.+ |++.+...+++.++++++.+++.+|..+
T Consensus 184 ~~~Wr~af~~~avl~vi~~~L~~~f~~eP~r 214 (493)
T KOG1330|consen 184 TFWWRWAFRGSAVLGVIVGLLVFLFVREPER 214 (493)
T ss_pred ccceEEEEEeehHHHHHHHHHHHhhccCccc
Confidence 55 5566777778888888888888887654
No 149
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.25 E-value=3.4e-11 Score=125.69 Aligned_cols=180 Identities=12% Similarity=0.012 Sum_probs=126.2
Q ss_pred HHHHHHHHHHhhhhhHHHHhhHHHHHHhhCCCCCh-HHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHHH
Q psy15864 238 AIVTSLFFIGQFGGMTTLQTYAVGIFESIHAPLDP-YFATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAACFIV 316 (553)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~ 316 (553)
+..+++.++..+..-..+....|.+.++.+.+... .+..+.+.++..++.+++|+++||+|||+++.+++++.+++.++
T Consensus 31 ~~~~~~~~~~~y~~r~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~ 110 (467)
T PRK09556 31 YLVVFIGYLTMYLIRKNFKAAQNDMISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGKNTKQFLPFLLILSAICMLG 110 (467)
T ss_pred HHHHHHHHHHHHHHhcChhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhccCccchHHHHHHHHHHHHHH
Confidence 33344444444444455556677777877776443 47777888999999999999999999999998888777777666
Q ss_pred HHHHHHhhcccCCCCChhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhHHHHhhc
Q psy15864 317 VAVYAQFHLSYGWDSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYYPMLDTF 396 (553)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 396 (553)
++..... ...+.+.+++++++.|++.+.+.... ..++++.+|++.||.++|+......+|+++++.+...+....
T Consensus 111 ~~~~~~~----~~~~~~~l~~~r~l~G~~~~~~~~~~-~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~~~~ 185 (467)
T PRK09556 111 FGASLGS----GSVSLGLMIALWALSGFFQSTGGPCS-YSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALWGANYF 185 (467)
T ss_pred HHHHHhc----ccchHHHHHHHHHHHHHHHhccchHH-HHHHHHHcCccceeeeEEeeecccchhhhHHHHHHHHHHHhh
Confidence 6543211 03566778888888888776665444 588999999999999999999989999999888876665542
Q ss_pred ---cchhhHHHHHHHHHHHHhhheEEccc
Q psy15864 397 ---HLWGTLYFYAAISVVGTLYMYFVMPE 422 (553)
Q Consensus 397 ---g~~~~~~~~~~~~~~~~~~~~~~~pe 422 (553)
+|...+.+.+++.++.+++.+++.++
T Consensus 186 ~~~~~~~~f~~~g~~~~~~~i~~~~~~~~ 214 (467)
T PRK09556 186 FDGHVIGMFIFPSIIALIIGFIGLRYGSD 214 (467)
T ss_pred ccCcchhHHHHHHHHHHHHHHHHHHhCCC
Confidence 23344444455555555555455444
No 150
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.25 E-value=3.7e-11 Score=124.72 Aligned_cols=292 Identities=12% Similarity=0.036 Sum_probs=159.9
Q ss_pred hhhhhhhhccCcccccchhchhhhhH---HHHHHHHHhhcccc----chHHHHHHHHHHHHHHHHHhccccCCceeeeec
Q psy15864 102 LVLTYVAEITQPHLRGMLSATASMTT---IFGTVSQLFLGSFL----HWRSAAILNLLFPILALCALYFIPESPHWLISQ 174 (553)
Q Consensus 102 ~~~~~i~e~~p~~~Rg~~~~~~~~~~---~lG~~l~~~l~~~l----gWr~~f~i~~i~~li~~i~~~~lpEsp~~l~~~ 174 (553)
.+-+++.|..+ +++....+....++ .+|.++++.+++.+ +||.+|++.+++.++.++..++++|++.....+
T Consensus 140 ~~da~~~e~~~-~~~~~~~~~~s~~~~~~~~G~~vg~~l~G~l~~~~~~~~~f~~~a~l~ll~~~~~~~~~E~~~~~~~~ 218 (468)
T TIGR00788 140 LVDSLYSERIR-ESPSAGPSLVSWMWGASATGGLISSLLGGPLLDKTLTRILFLITAALLLLQLFVSNLSKERRAFVRPR 218 (468)
T ss_pred hHHHHHhhhhh-cCCCcCCCeeeHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHhccccccccccc
Confidence 34488899988 65555444444333 36777766666554 899999999888887766667788863111000
Q ss_pred CChHHHHHHHHHHcCCCCCcchHHHHHHHHHHHHHHHHHhcCCCCCCChhhhhhhhhcchhHHHHHHHHHHHHhhhhhHH
Q psy15864 175 GRMQEASASLCWLRGWVTPDKVQTELSQITKAIEESELKRLGKDGQRRPNYRMYMRRTFLLPYAIVTSLFFIGQFGGMTT 254 (553)
Q Consensus 175 ~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (553)
...++. .... .............. ...+.. ++++.....++..++.+.........
T Consensus 219 ~~~~~~-~~~~--------~~~~~~~~~~~~~~--------------~~l~~~-l~~~~i~~~l~fifl~~~~~~~~~~~ 274 (468)
T TIGR00788 219 IGTYLE-MNMA--------LLTLGVLANVKVQI--------------LGLRGA-IQLLEIAKPLIFIFLSYANLPGASGS 274 (468)
T ss_pred ccccch-hhhh--------hhhhhHHHHHHHHH--------------HHHHHH-HhcHHHHHHHHHHHHHHhhcCCCCce
Confidence 000000 0000 00000000000000 011111 22222222222222201111111111
Q ss_pred HHhhHHHHHHhhCCCCC-hHHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHHHHHHHH-HhhcccCCCCC
Q psy15864 255 LQTYAVGIFESIHAPLD-PYFATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAACFIVVAVYA-QFHLSYGWDSP 332 (553)
Q Consensus 255 ~~~~~~~~~~~~g~~~~-~~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~-~~~~~~~~~~~ 332 (553)
+.++.+ ...|++.. ......+.+++.++|..+.+++.+|++.|+++.++.++.+++.+...... .+.........
T Consensus 275 ~f~~~~---~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~ 351 (468)
T TIGR00788 275 VFCATT---QCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDE 351 (468)
T ss_pred eEEEEc---ccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeeeccccccCCCCe
Confidence 111111 23455443 34666677899999999999999999999998888877777665432211 00000001223
Q ss_pred hhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhHHHHhhcc-----ch--hhHHHH
Q psy15864 333 LVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYYPMLDTFH-----LW--GTLYFY 405 (553)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~~~g-----~~--~~~~~~ 405 (553)
+.++....+.+++.+..+.+.. +++++.+|++.+|+..++...+.+++..+++.+.+.+.+..| +. +...+.
T Consensus 352 ~~~~~~~~l~~~~~g~~~~~~~-~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l~~~~g~~~~~~~~~~~~i~i 430 (468)
T TIGR00788 352 VFVLGDSIIAEVLAQLKFMPFL-VLLARLCPSGCESSVFALLASILHLGSSVSGFLGVLLMETIGITCDNSNNLWLLILG 430 (468)
T ss_pred eeeeehhHHHHHHHHHHHccHH-HHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccchHHHHHH
Confidence 3444555666777777777774 999999999999999999999999999999988888887665 22 222333
Q ss_pred HHHHHHHHhhheEEccc
Q psy15864 406 AAISVVGTLYMYFVMPE 422 (553)
Q Consensus 406 ~~~~~~~~~~~~~~~pe 422 (553)
+.++.++.+...+++|+
T Consensus 431 ~~~~~l~~l~~~~llP~ 447 (468)
T TIGR00788 431 HSLAPLLPLPLLHLLPR 447 (468)
T ss_pred HHHHHHHHHHHHHhCCC
Confidence 33333333344447786
No 151
>PRK11043 putative transporter; Provisional
Probab=99.24 E-value=1.3e-10 Score=118.92 Aligned_cols=154 Identities=14% Similarity=-0.024 Sum_probs=114.4
Q ss_pred HhhHHHHHHhhCCCCC-hHHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHHHHHHHHHhhcccCCCCChh
Q psy15864 256 QTYAVGIFESIHAPLD-PYFATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAACFIVVAVYAQFHLSYGWDSPLV 334 (553)
Q Consensus 256 ~~~~~~~~~~~g~~~~-~~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 334 (553)
....|.+.++.+.+.. ..+...+..++.+++.+++|+++||+|||+.++.+.++..++.++..+ ..+.+.
T Consensus 26 ~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~---------~~~~~~ 96 (401)
T PRK11043 26 LPAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGMLW---------VESAAQ 96 (401)
T ss_pred HhhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHHHH---------hcCHHH
Confidence 3344555566666543 346677788999999999999999999999998888777777766655 456677
Q ss_pred HHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhHHHHhhccchhhHHHHHHHHHHHHh
Q psy15864 335 PTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYYPMLDTFHLWGTLYFYAAISVVGTL 414 (553)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 414 (553)
+++.+++.+++.+.... ....++.|.+|++.++...+.......+++.++|.+.+.+.+..+|...+.+.+++.++..+
T Consensus 97 l~~~~~l~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~ 175 (401)
T PRK11043 97 LLVLRFVQAVGVCSAAV-IWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHFGWQAIFATLFAITLLLIL 175 (401)
T ss_pred HHHHHHHHHhhhHHHHH-HHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHH
Confidence 77777777776544443 33467789999998888888888888889999999999988888877777766666655555
Q ss_pred hheEE
Q psy15864 415 YMYFV 419 (553)
Q Consensus 415 ~~~~~ 419 (553)
+.+++
T Consensus 176 ~~~~~ 180 (401)
T PRK11043 176 PTLRL 180 (401)
T ss_pred HHHHc
Confidence 44333
No 152
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.24 E-value=1.8e-10 Score=120.64 Aligned_cols=118 Identities=14% Similarity=-0.029 Sum_probs=74.2
Q ss_pred hHHHHHHHHHHHHHHHHHH----hhhhcccCCcceeecchhHHHHHHHHHHHHHHhhcccCCCCChhHHHHHHHHHHHHh
Q psy15864 272 PYFATLLLGVAELGGALLC----VVLIHYTGKRPLALISTGGSAACFIVVAVYAQFHLSYGWDSPLVPTVFLVLAAFLTH 347 (553)
Q Consensus 272 ~~~~~~~~~i~~~~g~~~~----g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (553)
..+..++..+..++..++. +++.+|++....+.+++++++++.+++.............+.++++...++.+++..
T Consensus 318 ~~~~~s~n~i~iil~~p~~~~~~~~l~~r~~~~~~~~~G~~l~~l~f~~l~~~~~~~~~~~~vs~~~~~~~~~l~~~ge~ 397 (500)
T PRK09584 318 PEQYQALNPFWIMIGSPILAAIYNKMGDRLPMPHKFAIGMVLCSGAFLVLPLGAKFANDAGIVSVNWLIASYGLQSIGEL 397 (500)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHhCcCCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHHHH
Confidence 4455556665555555555 445555555556677777777777776554322111112334556666666666654
Q ss_pred hhhccccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhH
Q psy15864 348 ICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYY 390 (553)
Q Consensus 348 ~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~ 390 (553)
...|+...++.+..|++.||.++|+......+++.+++.+..
T Consensus 398 -~~~p~g~s~~~~~aP~~~rg~~~g~~~l~~a~g~~~~g~~~~ 439 (500)
T PRK09584 398 -MISGLGLAMVAQLVPQRLMGFIMGSWFLTTAGAALIAGYVAN 439 (500)
T ss_pred -HHhHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444665688999999999999999877666666666665554
No 153
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.24 E-value=2.3e-11 Score=122.92 Aligned_cols=160 Identities=16% Similarity=0.039 Sum_probs=121.1
Q ss_pred hHHHHhhHHHHHHhhCCCCC-hHHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHHHHHHHHHhhcccCCC
Q psy15864 252 MTTLQTYAVGIFESIHAPLD-PYFATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAACFIVVAVYAQFHLSYGWD 330 (553)
Q Consensus 252 ~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~ 330 (553)
.+....+.|.+.++.+.+.. ..+...+..++..++.++.|+++||+|||+++.++.++.+++.++..+ .+
T Consensus 19 ~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~~~~~~---------~~ 89 (377)
T TIGR00890 19 VYTWTLLAPPLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGFTFYAI---------AD 89 (377)
T ss_pred HhhhhhHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHHHHHHHH---------HH
Confidence 44556677888777777643 347777888999999999999999999999999999888888877776 44
Q ss_pred CChhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhHHHHhhccchhhHHHHHHHHH
Q psy15864 331 SPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYYPMLDTFHLWGTLYFYAAISV 410 (553)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~~~~ 410 (553)
+.+.+++.+.+.+++.+..+... ..++.+.+| +.|+.+.++......++..+++++.+.+.+..+|.+.+.+.+++.+
T Consensus 90 ~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~f~~~~~~~~ 167 (377)
T TIGR00890 90 SLAALYLTYGLASAGVGIAYGIA-LNTAVKWFP-DKRGLASGIIIGGYGLGSFILSPLITSVINLEGVPAAFIYMGIIFL 167 (377)
T ss_pred HHHHHHHHHHHHhHHHHHHHHhH-HHHHHHHcC-cccHHHHHHHHHhcchhHhHHHHHHHHHHhcccHHHHHHHHHHHHH
Confidence 56777777877777766554443 356677776 5699999998888888888777777777777777777777777666
Q ss_pred HHHhhheEEccc
Q psy15864 411 VGTLYMYFVMPE 422 (553)
Q Consensus 411 ~~~~~~~~~~pe 422 (553)
+..++.++++++
T Consensus 168 ~~~~~~~~~~~~ 179 (377)
T TIGR00890 168 LVIVLGAFLIGY 179 (377)
T ss_pred HHHHHHHHheec
Confidence 666555555543
No 154
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.23 E-value=2.9e-11 Score=103.40 Aligned_cols=136 Identities=17% Similarity=0.183 Sum_probs=107.1
Q ss_pred HHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHHHHHHHHHhhcccCCCCChhHHHHHHHHHHHHhhhhcccccee
Q psy15864 278 LLGVAELGGALLCVVLIHYTGKRPLALISTGGSAACFIVVAVYAQFHLSYGWDSPLVPTVFLVLAAFLTHICIRLLPWML 357 (553)
Q Consensus 278 ~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (553)
...++.+++.++.|++.||+|||+.+..+..+..++.+++.. ..+.+..++..++.+++.+... +....+
T Consensus 6 ~~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~g~~~~~~~-~~~~~~ 75 (141)
T TIGR00880 6 GYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFAL---------SSNITVLIIARFLQGFGAAFAL-VAGAAL 75 (141)
T ss_pred eehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHH---------hccHHHHHHHHHHHHHHHHHHH-HhHHHH
Confidence 456788899999999999999999988887777777666554 3455666667777777665554 444588
Q ss_pred eccccccchhhhhhhHHHHHHHHHHHHHHHHhHHHHhhccchhhHHHHHHHHHHHHhhheEEcccC
Q psy15864 358 IGEVFPNNIRATASGASGSSSYIFAFAVNKLYYPMLDTFHLWGTLYFYAAISVVGTLYMYFVMPET 423 (553)
Q Consensus 358 ~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~pet 423 (553)
+.|.+|++.|+++.++.+....++..+++.+.+.+.+..++...+.+.+++.++..++.+++.||+
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (141)
T TIGR00880 76 IADIYPPEERGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILLAFLLPET 141 (141)
T ss_pred HHHHCChhhhhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHHHhhcCCCC
Confidence 899999999999999999999999999999999988877766677777777777766666666664
No 155
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.23 E-value=8.2e-11 Score=120.10 Aligned_cols=160 Identities=13% Similarity=0.007 Sum_probs=115.6
Q ss_pred HHHHhhHHHHH-HhhCCCCC-hHHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHHHHHHHHHhhcccCCC
Q psy15864 253 TTLQTYAVGIF-ESIHAPLD-PYFATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAACFIVVAVYAQFHLSYGWD 330 (553)
Q Consensus 253 ~~~~~~~~~~~-~~~g~~~~-~~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~ 330 (553)
+.+..+++.++ +..|.+.. ..+...+..++..+..+++|+++||+|||+++.++.++.+++.+++.. .+
T Consensus 27 ~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~~~~---------~~ 97 (400)
T PRK11646 27 FVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATMAI---------AH 97 (400)
T ss_pred HHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHHHHH---------hc
Confidence 33344444443 45565432 235555566777777899999999999999999998888888877665 45
Q ss_pred CChhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhHHHHhhccchhhHHHHHHHHH
Q psy15864 331 SPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYYPMLDTFHLWGTLYFYAAISV 410 (553)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~~~~ 410 (553)
+.+.+++.+++.+++.+... +...+++.+.+|++.|+++.|+......++..++|.+.+.+. ..+|...+++.+++.+
T Consensus 98 ~~~~l~~~~~l~g~~~~~~~-~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~-~~g~~~~f~~~~~~~~ 175 (400)
T PRK11646 98 EPWLLWLSCILSGLGGTLFD-PPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLL-QYDFRLVCATGAVLFV 175 (400)
T ss_pred cHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHH
Confidence 66677777777777664443 333478899999999999999999999999999999999888 6676666666666555
Q ss_pred HHHhhheEEcccC
Q psy15864 411 VGTLYMYFVMPET 423 (553)
Q Consensus 411 ~~~~~~~~~~pet 423 (553)
+..++..+++|+.
T Consensus 176 ~~~i~~~~~~~~~ 188 (400)
T PRK11646 176 LAAAFNAWLLPAY 188 (400)
T ss_pred HHHHHHHHhCCcc
Confidence 5544444455653
No 156
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.22 E-value=1.3e-10 Score=119.99 Aligned_cols=179 Identities=9% Similarity=-0.074 Sum_probs=112.4
Q ss_pred HHHHHhhhhhHHHHhhHHHHHHhhCC---CCCh-HH---HHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHH
Q psy15864 243 LFFIGQFGGMTTLQTYAVGIFESIHA---PLDP-YF---ATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAACFI 315 (553)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~g~---~~~~-~~---~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~ 315 (553)
+.++........+.+..|.+.++.+. +... .. ......++..+|++++|+++||+|||+++.++.+++.++.+
T Consensus 29 ~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~ 108 (432)
T PRK10406 29 SGNLVEWFDFYVYSFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKSMLISVCMMCFGSL 108 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHH
Confidence 34444455555666666766666532 2111 12 22334455669999999999999999999999999988888
Q ss_pred HHHHHHHhhcccCCCCChhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhHHHH--
Q psy15864 316 VVAVYAQFHLSYGWDSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYYPML-- 393 (553)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~-- 393 (553)
+.++.+.+... .......+++++++.|++.+..+... .++++|.+|++.||.+.++.......|.++++.+...+.
T Consensus 109 ~~~~~~~~~~~-~~~~~~~l~~~R~l~G~g~g~~~~~~-~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~ 186 (432)
T PRK10406 109 VIACLPGYETI-GTWAPALLLLARLFQGLSVGGEYGTS-ATYMSEVAVEGRKGFYASFQYVTLIGGQLLALLVVVVLQQT 186 (432)
T ss_pred HHhhcCCchhH-HHHHHHHHHHHHHHHHhhhhhhHhhH-HHHHHHhCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 87762210000 00012357778889998877666544 599999999999999888776666565565554433322
Q ss_pred ------hhccchhhHHHHHHHHHHHHhhheEEcccCC
Q psy15864 394 ------DTFHLWGTLYFYAAISVVGTLYMYFVMPETE 424 (553)
Q Consensus 394 ------~~~g~~~~~~~~~~~~~~~~~~~~~~~pet~ 424 (553)
...+|+..|++.++ ..++.++....+||+.
T Consensus 187 ~~~~~~~~~gWr~~F~i~~~-~~ll~~~~~~~~~e~~ 222 (432)
T PRK10406 187 LEDAELREWGWRIPFALGAV-LAVVALWLRRQLDETS 222 (432)
T ss_pred CCHHHHhccchHHHHHHHHH-HHHHHHHHHhcCCCCc
Confidence 24566555654444 3334444445677764
No 157
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.22 E-value=6.6e-11 Score=122.85 Aligned_cols=159 Identities=11% Similarity=0.166 Sum_probs=115.9
Q ss_pred hHHHHhhHHHHHHhhCCCCC-hHHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHHHHHHHHHhhcccCCC
Q psy15864 252 MTTLQTYAVGIFESIHAPLD-PYFATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAACFIVVAVYAQFHLSYGWD 330 (553)
Q Consensus 252 ~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~ 330 (553)
...+..+.+.+.+..+.+.. ..+......++..++.++.|+++||+|||++++.+.++.+++.+++++ ..
T Consensus 35 ~~~~~~~~~~i~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~---------~~ 105 (455)
T TIGR00892 35 PKAVTVFFKELQQIFQATYSETAWISSIMLAVLYAGGPISSILVNRFGCRPVVIAGGLLASLGMILASF---------SS 105 (455)
T ss_pred hcchhhhHHHHHHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHcCchHHHHhhHHHHHHHHHHHHH---------hh
Confidence 34456677888787777643 346666666777888899999999999999999888888777776655 33
Q ss_pred CChhHHHH-HHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhHHHHhhccchhhHHHHHHHH
Q psy15864 331 SPLVPTVF-LVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYYPMLDTFHLWGTLYFYAAIS 409 (553)
Q Consensus 331 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~~~ 409 (553)
+.+.+++. +++.+++.+....+. ..++.+.+| +.|+++.|+.+....+++.++|.+.+.+.+..+|.+.+++.+++.
T Consensus 106 ~~~~l~~~~~~l~G~~~~~~~~~~-~~~~~~~~~-~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~gwr~~f~~~~~~~ 183 (455)
T TIGR00892 106 NVIELYLTAGFITGLGLAFNFQPS-LTMLGKYFY-RRRPLANGLAMAGSPVFLSTLAPLNQYLFESFGWRGSFLILGGLL 183 (455)
T ss_pred hHHHHHHHHHHHHHhcchhhhhHH-HHHHHHHHH-hhHHHHHHHHHhcccHHHHHHHHHHHHHHHHhChHHHHHHHHHHH
Confidence 44554433 355566555444333 366678886 789999999999999999999999999988888888888777766
Q ss_pred HHHHhhheEEcc
Q psy15864 410 VVGTLYMYFVMP 421 (553)
Q Consensus 410 ~~~~~~~~~~~p 421 (553)
++..++.+++.|
T Consensus 184 ~~~~v~~~~~~~ 195 (455)
T TIGR00892 184 LHCCVCGALMRP 195 (455)
T ss_pred HHHHHHHHHhCC
Confidence 655544444433
No 158
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.22 E-value=1.1e-10 Score=119.96 Aligned_cols=156 Identities=10% Similarity=-0.043 Sum_probs=108.4
Q ss_pred HHHHhhhhhHHHHhhHHHHHHh-hCCCCCh-HHHHHHHHHHHHHHHHHHhhhhccc-CCcceeecchhHHHHHHHHHHHH
Q psy15864 244 FFIGQFGGMTTLQTYAVGIFES-IHAPLDP-YFATLLLGVAELGGALLCVVLIHYT-GKRPLALISTGGSAACFIVVAVY 320 (553)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~-~~~~~~~~i~~~~g~~~~g~l~dr~-Grr~~l~~~~~~~~i~~~~~~~~ 320 (553)
..+.....++.+..++|.++.. .|++... ......+.+...++.+++|+++||+ |||++++++.++++++.+++...
T Consensus 17 ~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~lg~lll~~~ 96 (493)
T PRK15462 17 LQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGHVVLGAS 96 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHh
Confidence 3344444566666777777654 4665433 3555666777788999999999999 99999999988888887655431
Q ss_pred HHhhcccCCCCChhHHHHHHHHHHHHhhhhccccceeeccccccc--hhhhhhhHHHHHHHHHHHHHHHHhHHHHhhccc
Q psy15864 321 AQFHLSYGWDSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNN--IRATASGASGSSSYIFAFAVNKLYYPMLDTFHL 398 (553)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~--~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~~~g~ 398 (553)
.......++...+..++.+... +...++++|.+|++ .|.++.++.+...++|++++|.+.+++.+..+|
T Consensus 97 --------~~~~~~~~l~l~li~iG~G~~~-~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~Gw 167 (493)
T PRK15462 97 --------EIHPSFLYLSLAIIVCGYGLFK-SNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEYSW 167 (493)
T ss_pred --------hcchhHHHHHHHHHHHhccccc-ccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhhhCh
Confidence 1111223333333333333332 33347889999986 799999999999999999999999999888887
Q ss_pred hhhHHHHHHH
Q psy15864 399 WGTLYFYAAI 408 (553)
Q Consensus 399 ~~~~~~~~~~ 408 (553)
...|.+.++.
T Consensus 168 ~~~F~iaaig 177 (493)
T PRK15462 168 AMGFGLAAVG 177 (493)
T ss_pred HHHHHHHHHH
Confidence 7776664443
No 159
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.21 E-value=1.1e-10 Score=121.58 Aligned_cols=161 Identities=9% Similarity=-0.100 Sum_probs=118.7
Q ss_pred HHHHHHHhhhhhHHHHhhHHHHHHh---hCCCC-ChHHHHHHHHHHHHHHHHHHhhhhcc-cCCcceeecchhHHHHHHH
Q psy15864 241 TSLFFIGQFGGMTTLQTYAVGIFES---IHAPL-DPYFATLLLGVAELGGALLCVVLIHY-TGKRPLALISTGGSAACFI 315 (553)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~~-~~~~~~~~~~i~~~~g~~~~g~l~dr-~Grr~~l~~~~~~~~i~~~ 315 (553)
.++..+....+++.+..++|.++.. .|.+. +..+......++..++.+++|+++|| +|||+++++++++.+++.+
T Consensus 15 l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~~g~~ 94 (475)
T TIGR00924 15 LFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVLMLGHF 94 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHHHHHHH
Confidence 3334444455566666777777754 45553 33466777888999999999999999 8999999999999888887
Q ss_pred HHHHHHHhhcccCCCCChhHHHHHHHHHHHHhhhhccccceeeccccccch---hhhhhhHHHHHHHHHHHHHHHHhHHH
Q psy15864 316 VVAVYAQFHLSYGWDSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNI---RATASGASGSSSYIFAFAVNKLYYPM 392 (553)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~---Rg~~~~~~~~~~~~~~~i~~~~~~~~ 392 (553)
++++ ..+.+.+++.+.+.+++.+... +...+++++.+|++. |+++.++.+...++|++++|.+.+++
T Consensus 95 ~~~~---------~~~~~~~~~~~~l~g~g~g~~~-~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l 164 (475)
T TIGR00924 95 MLAM---------SIYPDLIFYGLGTIAVGSGLFK-ANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVI 164 (475)
T ss_pred HHHh---------cccHhHHHHHHHHHHhcccccc-CCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHH
Confidence 7765 4445556666666666554443 343478889998754 88899999999999999999999999
Q ss_pred HhhccchhhHHHHHHHHHH
Q psy15864 393 LDTFHLWGTLYFYAAISVV 411 (553)
Q Consensus 393 ~~~~g~~~~~~~~~~~~~~ 411 (553)
.+..+|...+.+.++..++
T Consensus 165 ~~~~g~~~~f~~~~~~~~~ 183 (475)
T TIGR00924 165 AENYGYHVGFNLAAVGMVI 183 (475)
T ss_pred HHhcChHHHHHHHHHHHHH
Confidence 8888877666665543333
No 160
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.21 E-value=5.9e-11 Score=117.72 Aligned_cols=140 Identities=17% Similarity=0.081 Sum_probs=111.7
Q ss_pred HHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHHHHHHHHHhhcccCCCCChhHHHHHHHHHHHHhhhhccc
Q psy15864 274 FATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAACFIVVAVYAQFHLSYGWDSPLVPTVFLVLAAFLTHICIRLL 353 (553)
Q Consensus 274 ~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (553)
...++..+..++...++.++.+|+|.|+.++++.+++++=+++.++ .++.+.+.+...+.++-......+.
T Consensus 263 ~l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~~~~~---------~~~~~~i~~~klLH~~e~~l~lva~ 333 (412)
T PF01306_consen 263 YLWSVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAIRIIGSGF---------ATNPWVISLIKLLHALEFPLLLVAA 333 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHT-----------SHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHHhh---------hcchHHHHHHHHHHHHHHHHHHHHH
Confidence 3444555777888899999999999999999999999998888887 6788888888999888887776666
Q ss_pred cceeeccccccchhhhhhhHH-HHHHHHHHHHHHHHhHHHHhhccchhhHHHHHHHHHHHHhhheEEcccC
Q psy15864 354 PWMLIGEVFPNNIRATASGAS-GSSSYIFAFAVNKLYYPMLDTFHLWGTLYFYAAISVVGTLYMYFVMPET 423 (553)
Q Consensus 354 ~~~~~~e~~p~~~Rg~~~~~~-~~~~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~pet 423 (553)
+-|+++.+|++..++...+. +...+++.++.+.+.|.+.+..|....+++.+++.++..++..+.++..
T Consensus 334 -fkYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd~~G~~~tylimg~iv~~~~li~~f~l~~~ 403 (412)
T PF01306_consen 334 -FKYITAHFDKRLSATLYLVGFQFAKQIGIIILSPLAGYLYDRIGFQHTYLIMGLIVLPFTLISAFTLKKD 403 (412)
T ss_dssp -HHHHHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS--S
T ss_pred -HHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhHhhcCcHHHHHHHHHHHHHHHHHheeeecCC
Confidence 48999999999988888875 4667889999999999999999987788888888777777776666544
No 161
>PRK09848 glucuronide transporter; Provisional
Probab=99.21 E-value=1.4e-10 Score=120.38 Aligned_cols=110 Identities=15% Similarity=0.042 Sum_probs=80.1
Q ss_pred HHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHHHHHHHHHhhcccCCCCChhHHHHHHHHHHHHhhhhccccceeec
Q psy15864 280 GVAELGGALLCVVLIHYTGKRPLALISTGGSAACFIVVAVYAQFHLSYGWDSPLVPTVFLVLAAFLTHICIRLLPWMLIG 359 (553)
Q Consensus 280 ~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (553)
.++.+++.++.++++||+|+|+++.++.++.+++.+++.+.. ..+.+..++..++.+++.+... +..++..+
T Consensus 274 ~~~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~i~~~~~~~~~-------~~~~~~~~~~~~l~g~G~~~~~-~~~~al~~ 345 (448)
T PRK09848 274 LVGTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLFFWVS-------VWSLPVALVALAIASIGQGVTM-TVMWALEA 345 (448)
T ss_pred HHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcC-------chhHHHHHHHHHHHHHHHHHHH-HHHHHHHH
Confidence 466788899999999999999999988887777766555311 2234444455556666655554 34457778
Q ss_pred cccccc-------hhhhhhhHHHHHHHHHHHHHHHHhHHHHhhcc
Q psy15864 360 EVFPNN-------IRATASGASGSSSYIFAFAVNKLYYPMLDTFH 397 (553)
Q Consensus 360 e~~p~~-------~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~~~g 397 (553)
|..|.+ .+|...|+.++...++..+++.+.+.+++..|
T Consensus 346 ~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~g~~l~~~G 390 (448)
T PRK09848 346 DTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAFILGLSG 390 (448)
T ss_pred HhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 887654 45888899999999999999999888776544
No 162
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.20 E-value=2.2e-10 Score=110.48 Aligned_cols=252 Identities=12% Similarity=0.081 Sum_probs=162.4
Q ss_pred hhhhhhhhhccCcccccchhchhhhhHHHHHHHHHhhcccc-----------------------chHHHHHHHHHHHHHH
Q psy15864 101 VLVLTYVAEITQPHLRGMLSATASMTTIFGTVSQLFLGSFL-----------------------HWRSAAILNLLFPILA 157 (553)
Q Consensus 101 ~~~~~~i~e~~p~~~Rg~~~~~~~~~~~lG~~l~~~l~~~l-----------------------gWr~~f~i~~i~~li~ 157 (553)
..+-.|++...+++.-...+.+.+...++|.+++|+++..+ .||++|.+.+...+++
T Consensus 123 taaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~~~~~~~~~~~~~~~~~~~v~~pYl~~~~~lvll 202 (422)
T COG0738 123 TAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILSGVALTMSAAQILAIKGADASSVQFPYLILAGLLVLL 202 (422)
T ss_pred hccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhccCHHHHHHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 34558999999998889999999999999999999887643 4888888887777666
Q ss_pred HHHhcc--ccCCceeeeecCChHHHHHHHHHHcCCCCCcchHHHHHHHHHHHHHHHHHhcCCCCCCChhhhhhhhhcchh
Q psy15864 158 LCALYF--IPESPHWLISQGRMQEASASLCWLRGWVTPDKVQTELSQITKAIEESELKRLGKDGQRRPNYRMYMRRTFLL 235 (553)
Q Consensus 158 ~i~~~~--lpEsp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (553)
.+.... +|+.+.-..+. ..........+++.+..+
T Consensus 203 ~v~~~~~k~p~~~~~~~~~-------------------------------------------~~~~~~~~~~l~~~~~~~ 239 (422)
T COG0738 203 AVLILLSKLPDLQVAAPSL-------------------------------------------GASGSAGLSSLFQNKHLR 239 (422)
T ss_pred HHHHHhccCCcCCcccccc-------------------------------------------cccccchHHHHHhChHHH
Confidence 555444 45432100000 000000222333333333
Q ss_pred HHHHHHHHHHHHhhhhhHHHHhhHHHHHHh-hCCCCCh-HHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHH
Q psy15864 236 PYAIVTSLFFIGQFGGMTTLQTYAVGIFES-IHAPLDP-YFATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAAC 313 (553)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~-~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~ 313 (553)
.. .+..+++...-.....|++.++.+ .|.+.+. ....+....+.++|.+++.++..|+...+.+.+..++..+.
T Consensus 240 ~g----vl~~FlYVG~Eva~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~~k~Laf~a~~~ill 315 (422)
T COG0738 240 LG----VLAIFLYVGAEVAIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRIKPEKYLAFYALIAILL 315 (422)
T ss_pred HH----HHHHHHHHhHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence 33 333444444455566677777766 5655443 46667777889999999999988998888877766555555
Q ss_pred HHHHHHHHHhhcccCCCCChhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhHHHH
Q psy15864 314 FIVVAVYAQFHLSYGWDSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYYPML 393 (553)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~ 393 (553)
++...+ .++ .+.+...++.|++.+..+. ..++...+..|.+ ....|....+..+|+++.|++.|++.
T Consensus 316 ~~~~~l---------~~g-~v~~~~l~~ig~F~simfP-TIfslal~~l~~~--ts~~s~~l~maivGGAiiP~l~G~i~ 382 (422)
T COG0738 316 LLAVAL---------IGG-VVALYALFLIGLFNSIMFP-TIFSLALKNLGEH--TSVGSGLLVMAIVGGAIIPPLQGVIA 382 (422)
T ss_pred HHHHHH---------hcC-hHHHHHHHHHHHHhHHHHH-HHHHHHHhccCcc--ccccceeeeeheecchHHHHHHHHHH
Confidence 555444 333 4445556677777777664 4468888888833 33444455778899999999999999
Q ss_pred hhccchhhHHHHHHHHHHH
Q psy15864 394 DTFHLWGTLYFYAAISVVG 412 (553)
Q Consensus 394 ~~~g~~~~~~~~~~~~~~~ 412 (553)
+..+....+.+...+|.+.
T Consensus 383 d~~g~~~~~~~~pllc~ly 401 (422)
T COG0738 383 DMFGIQLTFLIVPLLCYLY 401 (422)
T ss_pred HhhhhHHHHHHHHHHHHHH
Confidence 9887655555344444333
No 163
>KOG2563|consensus
Probab=99.20 E-value=1.6e-10 Score=112.84 Aligned_cols=271 Identities=16% Similarity=0.129 Sum_probs=153.3
Q ss_pred hhhhhccCcccccchhchhhhhHHHHHHHHHhhcccc----------chHH--HHHHHHHHHHHHHHHhcc-ccCCceee
Q psy15864 105 TYVAEITQPHLRGMLSATASMTTIFGTVSQLFLGSFL----------HWRS--AAILNLLFPILALCALYF-IPESPHWL 171 (553)
Q Consensus 105 ~~i~e~~p~~~Rg~~~~~~~~~~~lG~~l~~~l~~~l----------gWr~--~f~i~~i~~li~~i~~~~-lpEsp~~l 171 (553)
-+..-|+|+++|..+..+-.++..+|.+++.++...+ .|-. +|+..++++++.+++..+ .++.|+.-
T Consensus 163 kiA~~WF~~~qra~A~~~~v~~n~LGvavg~llppilV~~~~~~~~~~~~~~~~f~~~~~l~~l~l~l~~~~~~~~P~tP 242 (480)
T KOG2563|consen 163 KIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLLPPILVPSSKDSEDNSWLFFTLFLGVECLAALLLALVLFVFTKKPPTP 242 (480)
T ss_pred HHHHhhCCcchhhhhhhHHHhcchHHHHHHhhccceecCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCC
Confidence 4456689999999999999988888888888777665 5766 355455554444333322 33333211
Q ss_pred eecCChHHHHHHHHHHcCCCCCcchHHHHHHHHHHHHHHHHHhcCCCCCCChhhhhhhhhcchhHHHHHHHHHHHHhhhh
Q psy15864 172 ISQGRMQEASASLCWLRGWVTPDKVQTELSQITKAIEESELKRLGKDGQRRPNYRMYMRRTFLLPYAIVTSLFFIGQFGG 251 (553)
Q Consensus 172 ~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (553)
.+ .+....+ +..........++.. .+++..+.+....+.
T Consensus 243 ps-----~s~~~~~--------------------------------~~~f~~si~~~~~n~----~F~il~~~ygi~~g~ 281 (480)
T KOG2563|consen 243 PS-----ASQAALQ--------------------------------DASFPKSIKSCFKNR----QFIILAICYGIGLGL 281 (480)
T ss_pred Cc-----hhHhhhh--------------------------------cCcHHHHHHHHHcCc----cHHHHHHHHhhhHHH
Confidence 00 0000000 000011122222222 122333333333444
Q ss_pred hHHHHhhHHHHHHhhCCC-CChHHHHHHHHHHHHHHHHHHhhhhcccCC-cceeecchhHHHHHHHHHHHHHHhhcccCC
Q psy15864 252 MTTLQTYAVGIFESIHAP-LDPYFATLLLGVAELGGALLCVVLIHYTGK-RPLALISTGGSAACFIVVAVYAQFHLSYGW 329 (553)
Q Consensus 252 ~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~i~~~~g~~~~g~l~dr~Gr-r~~l~~~~~~~~i~~~~~~~~~~~~~~~~~ 329 (553)
++.+...+...+...+++ ....+...+..+++++|++++|.++||.+. |.++++......++.+.+..... ..
T Consensus 282 F~~l~~~l~~~l~~sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~fk~~~~v~~~~~~v~~~~l~~~t~-----~~ 356 (480)
T KOG2563|consen 282 FNSLSTLLNLALCPSGYEGVFAGYIGALMIVAGMLGALASGIIADKTKKFKLTTLVLYLFALVGTLMLLTCTL-----FL 356 (480)
T ss_pred HHHHHHHhhhccccccCCccccchhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhc-----cC
Confidence 444444444333334444 345577888889999999999999999875 33344444444444222221111 13
Q ss_pred CCChhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhHHHHhhcc----chhhHHHH
Q psy15864 330 DSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYYPMLDTFH----LWGTLYFY 405 (553)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~~~g----~~~~~~~~ 405 (553)
...++++....++|++. .+..|+.+-+..|..-|..-++..|+.+.++++.+++..++.+...+..+ ++...+.+
T Consensus 357 ~~~viv~~t~~~~g~~~-~~~~Pig~ElgvE~TyPv~E~tSsGll~~~gq~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 435 (480)
T KOG2563|consen 357 GDSVIVFTTCGLLGFFG-TGYLPIGFELGVETTYPVAEGTSSGLLNLSGQIFGVILVFIMGILAEDLGPPGNTFPANIFL 435 (480)
T ss_pred CceEehhhhHHHHHHhh-cCCCCcceeeeeeeccccCCcccceeEEeehhHHHHHHHHHHHHHhhccCCCCCCccchhHh
Confidence 34444555555555543 56667877888888766666889999999999999999998888887665 33334444
Q ss_pred HHHHHHHHhhheEEccc
Q psy15864 406 AAISVVGTLYMYFVMPE 422 (553)
Q Consensus 406 ~~~~~~~~~~~~~~~pe 422 (553)
+..+.+..++..++.|.
T Consensus 436 ~~~~~l~~~lva~~r~~ 452 (480)
T KOG2563|consen 436 TVSALLGAILVAFFRPD 452 (480)
T ss_pred HHHHHHHHHHHhhhhhh
Confidence 44444444444444444
No 164
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.20 E-value=3.5e-10 Score=114.95 Aligned_cols=184 Identities=12% Similarity=0.074 Sum_probs=123.2
Q ss_pred hhHHHHHHHHHHHHhhhhhHHHHhhHHHHHH-hhCCCCC-hHHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHH
Q psy15864 234 LLPYAIVTSLFFIGQFGGMTTLQTYAVGIFE-SIHAPLD-PYFATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSA 311 (553)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~-~~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~ 311 (553)
-++.+++..+.+...+...+......+.+.+ +.+++.+ ..+...+..++..++.++.|++.||+|.|+++.++.++.+
T Consensus 32 a~r~l~~s~~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll~~ 111 (462)
T PRK15034 32 ARRNLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAILI 111 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHH
Confidence 3445555555566666666666665565544 4666543 3466667788888888889999999999999988888887
Q ss_pred HHHHHHHHHHHhhcccCCCCChhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhHH
Q psy15864 312 ACFIVVAVYAQFHLSYGWDSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYYP 391 (553)
Q Consensus 312 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~ 391 (553)
+..++..+.. ++..++.+.+++.+++.|++ +..+.+ ....++..+|++.||++.|+....+.+|..+++++.+.
T Consensus 112 i~~~~~~~a~----~~~~~s~~~lli~r~l~Gig-g~~f~~-~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~ 185 (462)
T PRK15034 112 IPCVWLGIAV----QNPNTPFGIFIVIALLCGFA-GANFAS-SMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPL 185 (462)
T ss_pred HHHHHHHHHH----cccCCCHHHHHHHHHHHHHH-HHhHHH-HHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 7777666521 00125677888888888886 445444 34788999999999999999977777777666655554
Q ss_pred HH-----hhc-------------cchhhHHHHHHHHHHHHhhheEEcccC
Q psy15864 392 ML-----DTF-------------HLWGTLYFYAAISVVGTLYMYFVMPET 423 (553)
Q Consensus 392 ~~-----~~~-------------g~~~~~~~~~~~~~~~~~~~~~~~pet 423 (553)
++ ... ++....+++..+.++..++.++++++.
T Consensus 186 ~i~~~l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~~~~~ 235 (462)
T PRK15034 186 VIFVPVFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWSGMNDI 235 (462)
T ss_pred HHHHHHHHHhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 33 222 233344455555556665666666654
No 165
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.19 E-value=5.5e-11 Score=124.13 Aligned_cols=143 Identities=11% Similarity=-0.060 Sum_probs=112.0
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHHHHHHHHHhhcccCCCCChhHHHHHHHHHHHHhhhhcc
Q psy15864 273 YFATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAACFIVVAVYAQFHLSYGWDSPLVPTVFLVLAAFLTHICIRL 352 (553)
Q Consensus 273 ~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (553)
.+....+.++.+++.+++|+++||+|||+++.++.++.+++.++..+.. ..+.+.+++.+++.|++.+.....
T Consensus 79 g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~-------~~~~~~l~~~r~~~G~~~~~~~~~ 151 (465)
T TIGR00894 79 GLILSSHFYGQIIIQIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAA-------GGGIALVVFCRVIQGLAQGSVSPA 151 (465)
T ss_pred hHHHHHHHHHHHHHHcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHH-------HcCchHHHHHHHHHHHhcccchhh
Confidence 3566778899999999999999999999999988887777766654321 234566777888888877666544
Q ss_pred ccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhHHHHhhc-cchhhHHHHHHHHHHHHhhheEEcccC
Q psy15864 353 LPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYYPMLDTF-HLWGTLYFYAAISVVGTLYMYFVMPET 423 (553)
Q Consensus 353 ~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~pet 423 (553)
. ..+++|.+|++.|++++++......++.++++.+.+.+.+.. +|+..+.+.+++.++..++.+.+.++.
T Consensus 152 ~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~ 222 (465)
T TIGR00894 152 T-HKIIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLWFVFPADD 222 (465)
T ss_pred H-HHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHHHHHhcCC
Confidence 4 489999999999999999999999999999999999988874 877777777766666655555555553
No 166
>KOG0255|consensus
Probab=99.19 E-value=8.4e-11 Score=124.54 Aligned_cols=150 Identities=18% Similarity=0.147 Sum_probs=118.2
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHHHHHHHHHhhcccCCCCChhHHHHHHHHHHHHhhhhcc
Q psy15864 273 YFATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAACFIVVAVYAQFHLSYGWDSPLVPTVFLVLAAFLTHICIRL 352 (553)
Q Consensus 273 ~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (553)
.+..+++.+|.++|+++.|+++|++|||+++++++++.+++.++.++ +.+.+.+++.+++.|++.+.....
T Consensus 121 ~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~---------a~~~~~~~~~Rfl~G~~~~~~~~~ 191 (521)
T KOG0255|consen 121 ALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAF---------APNYWMFLIFRFLSGFFGSGPLTV 191 (521)
T ss_pred HHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHH---------hCcHHHHHHHHHHHHhhccchhHH
Confidence 35677888999999999999999999999999999999999988887 788999999999999988766654
Q ss_pred ccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhHHHHhhccchhhHHHHHHHHHHHHhhheEEcccC------CCC
Q psy15864 353 LPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYYPMLDTFHLWGTLYFYAAISVVGTLYMYFVMPET------EGR 426 (553)
Q Consensus 353 ~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~pet------~~~ 426 (553)
. +.+++|+++++.|+.+..+ ..+.+.++.+++.+.+++.. +|++.+++..+..++. ++.+++.||+ +++
T Consensus 192 ~-~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~--~Wr~~~~~~~~~~~~~-~~~~~l~~Es~rwl~~~g~ 266 (521)
T KOG0255|consen 192 G-FGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR--DWRWLFWIISIPSGLF-LLLWFLPPESPRWLLSKGR 266 (521)
T ss_pred h-HhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh--hHHHHHHHHHHHHHHH-HHHHHccCcChHHHHHcCc
Confidence 4 6999999999999999999 88888899999988888877 4444444444444333 3336667787 455
Q ss_pred ChHHHHHHHh
Q psy15864 427 TLRDIEEHFA 436 (553)
Q Consensus 427 ~~~~~~~~~~ 436 (553)
..++.+.+.+
T Consensus 267 ~~~a~~~l~~ 276 (521)
T KOG0255|consen 267 IDEAIKILKK 276 (521)
T ss_pred hHHHHHHHHH
Confidence 5444444433
No 167
>PTZ00207 hypothetical protein; Provisional
Probab=99.19 E-value=3.2e-10 Score=118.52 Aligned_cols=165 Identities=13% Similarity=0.053 Sum_probs=111.5
Q ss_pred hhhHHHHhhHHHHHHhhCCCCChH-HHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHHHHHHHHHhhcccC
Q psy15864 250 GGMTTLQTYAVGIFESIHAPLDPY-FATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAACFIVVAVYAQFHLSYG 328 (553)
Q Consensus 250 ~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~ 328 (553)
+..+.+..+.+.+.+..|++.... +...+ +....++.+++|+++||+|+|++++++.++.+++.+++++.... ..
T Consensus 41 g~~y~fsv~s~~L~~~lgls~~~l~~i~sv-g~~~g~~~lp~G~L~Dr~G~R~vllig~ll~~iG~ll~ala~~~---~i 116 (591)
T PTZ00207 41 SFMYAFNLISGAMQARYNLTQRDLSTITTV-GIAVGYFLLPYSFIYDYLGPRPIFVLSMTVFCLGTLLFALTFQE---VI 116 (591)
T ss_pred HHHHHHHHHHHHHHHHhCcCHHHHHHHHHH-HHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcc---cc
Confidence 345566778888888888764332 32222 22333455678999999999999999999999999887763210 00
Q ss_pred CCCChhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhHHHHhhccchhhHHHHHHH
Q psy15864 329 WDSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYYPMLDTFHLWGTLYFYAAI 408 (553)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~~ 408 (553)
..+.+.+++.+++.|++.+....... ..+.+.+| +.||.++|+......+|+++.+.+...+.. .++...+++.+++
T Consensus 117 ~~s~~~l~l~r~l~G~G~~~~~~~~~-~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~-~~~~~~fl~l~vl 193 (591)
T PTZ00207 117 EGSVVRLSVYNGLMTLGCMLFDLGAV-VTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFFS-DNTSAYFFFLMSF 193 (591)
T ss_pred cCcHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhHHHHHHHHHHH
Confidence 14567777778888877655544443 66788886 789999999999999999876666555543 2344556666666
Q ss_pred HHHHHhhheEEcc
Q psy15864 409 SVVGTLYMYFVMP 421 (553)
Q Consensus 409 ~~~~~~~~~~~~p 421 (553)
.++++++.+++++
T Consensus 194 ~~vv~ll~~~~vr 206 (591)
T PTZ00207 194 ALVVGILAIVFMR 206 (591)
T ss_pred HHHHHHHHHhhee
Confidence 6666655555544
No 168
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.18 E-value=1.2e-10 Score=116.31 Aligned_cols=159 Identities=16% Similarity=-0.004 Sum_probs=121.7
Q ss_pred HhhhhhHHHHhhHHHHHHhhCCCCC-hHHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHHHHHHHHHhhc
Q psy15864 247 GQFGGMTTLQTYAVGIFESIHAPLD-PYFATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAACFIVVAVYAQFHL 325 (553)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~ 325 (553)
...........+.+.+..+.+.+.. ..+......++.+++.++.|+++||+|||+.+.++.++..++.++...
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~~~~~~~------ 83 (352)
T cd06174 10 LSGLDRGLLSPALPLLAEDLGLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLLLAF------ 83 (352)
T ss_pred HHHHhhhhhHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHHHHHHHHH------
Confidence 3344455556666777776665533 346677788999999999999999999999999998888888877766
Q ss_pred ccCCCCChhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhHHHHhhccchhhHHHH
Q psy15864 326 SYGWDSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYYPMLDTFHLWGTLYFY 405 (553)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~~~g~~~~~~~~ 405 (553)
..+.+.+++.+++.+++.+....+. ..++.|.+|++.|+++.++......++..+++.+.+.+.+..++...+.+.
T Consensus 84 ---~~~~~~~~~~~~l~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 159 (352)
T cd06174 84 ---ASSLWLLLVGRFLLGLGGGALYPAA-AALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAESLGWRWLFLIL 159 (352)
T ss_pred ---hccHHHHHHHHHHHHcccccccHhH-HHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 4566777777888887766555444 488999999999999999999999999999999999988877766666555
Q ss_pred HHHHHHHHhh
Q psy15864 406 AAISVVGTLY 415 (553)
Q Consensus 406 ~~~~~~~~~~ 415 (553)
+++.++..++
T Consensus 160 ~~~~~~~~~~ 169 (352)
T cd06174 160 AILGLLLALL 169 (352)
T ss_pred HHHHHHHHHH
Confidence 5544444433
No 169
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.18 E-value=1.6e-09 Score=109.46 Aligned_cols=163 Identities=15% Similarity=0.076 Sum_probs=112.7
Q ss_pred hHHHHhhHHHHHHhhC-CCCCh-HHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHHHHHHHHHhhcccCC
Q psy15864 252 MTTLQTYAVGIFESIH-APLDP-YFATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAACFIVVAVYAQFHLSYGW 329 (553)
Q Consensus 252 ~~~~~~~~~~~~~~~g-~~~~~-~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~ 329 (553)
......|.+.++++.| .+.+. .....+..++.++.-++.+++..|+|-+++++++++..++=+.+++.. .
T Consensus 223 ~~~~~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~~~~~vR~~l~a~~--------~ 294 (400)
T PF03825_consen 223 HAAYYTFFSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKWLLLLALVAYAVRWLLYAYF--------S 294 (400)
T ss_pred HHHHHHHHHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHh--------c
Confidence 3444455566666666 44332 334456667888888999999999999999999998888888887763 2
Q ss_pred CCChhHHHHH----HHHHHHHhhhhccccceeeccccccchhhhhhhHHHHH-HHHHHHHHHHHhHHHHhhccchh----
Q psy15864 330 DSPLVPTVFL----VLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSS-SYIFAFAVNKLYYPMLDTFHLWG---- 400 (553)
Q Consensus 330 ~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~-~~~~~~i~~~~~~~~~~~~g~~~---- 400 (553)
++.+..++.. .+.|..++....+.. .|+.+.+|++.|+++.++...+ ..+|+.++..+.|++.+..+...
T Consensus 295 ~~~~~~~~~~~l~q~lhG~tf~~~~~a~~-~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g~~~~~~~ 373 (400)
T PF03825_consen 295 DPWPFIVALQLLGQLLHGLTFGLFHAASV-RYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGWLYDAFGARGMFDW 373 (400)
T ss_pred CCcHHHHHHHHHHHhhhhHHHHHHHHHHH-HHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcchhhhhH
Confidence 3434333332 346777766665554 8999999999999999988776 56899999999999998866432
Q ss_pred --hHHHHHHHHHHHHhhheEEcccC
Q psy15864 401 --TLYFYAAISVVGTLYMYFVMPET 423 (553)
Q Consensus 401 --~~~~~~~~~~~~~~~~~~~~pet 423 (553)
.+.+.+++.++..++.+++.+|+
T Consensus 374 ~~~~~v~a~~~~~~~~~f~~~fk~~ 398 (400)
T PF03825_consen 374 SAVFLVFAVMALVILVLFVILFKPK 398 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHhhccCC
Confidence 23334444444445555555554
No 170
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.18 E-value=2.6e-10 Score=116.21 Aligned_cols=146 Identities=14% Similarity=-0.015 Sum_probs=117.1
Q ss_pred hHHHHhhHHHHHHhhCCCCCh-HHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHHHHHHHHHhhcccCCC
Q psy15864 252 MTTLQTYAVGIFESIHAPLDP-YFATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAACFIVVAVYAQFHLSYGWD 330 (553)
Q Consensus 252 ~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~ 330 (553)
...+...+|.+.++.+.+... .+..+...++..+++++.|+++||+|||+++..+.++.+++.++.++ .+
T Consensus 25 ~~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~~~~~~~---------a~ 95 (393)
T PRK09705 25 LTSVGPLLPQLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAVGALMREL---------YP 95 (393)
T ss_pred hhccchhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHHHHHHHHH---------Cc
Confidence 355667788888888876443 57777888999999999999999999999999999999999998887 66
Q ss_pred CChhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhHHHHhhc-cchhhHHHHHHH
Q psy15864 331 SPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYYPMLDTF-HLWGTLYFYAAI 408 (553)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~~~-g~~~~~~~~~~~ 408 (553)
+.+.+++.+++.|++.+...... ..++.+.+| +.|+.++++......++..+++.+.+.+.+.. +|...+.++++.
T Consensus 96 ~~~~ll~~r~l~Gig~~~~~~~~-~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~~~w~~~~~~~~~~ 172 (393)
T PRK09705 96 QSALLLSSALLGGVGIGIIQAVM-PSVIKRRFQ-QRTPLVMGLWSAALMGGGGLGAAITPWLVQHSETWYQTLAWWALP 172 (393)
T ss_pred chHHHHHHHHHHHhHHHHHhhhh-hHHHHHHcc-ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHH
Confidence 77888889999999887766554 477888887 77899999988888888899998888877765 554544444433
No 171
>PRK15075 citrate-proton symporter; Provisional
Probab=99.17 E-value=2.7e-10 Score=117.77 Aligned_cols=158 Identities=10% Similarity=0.034 Sum_probs=112.2
Q ss_pred HHHHHHHHHHHhhhhhHHHHhhHHHHHHhhCCCCCh-H-HHHHH-----HHHHHHHHHHHHhhhhcccCCcceeecchhH
Q psy15864 237 YAIVTSLFFIGQFGGMTTLQTYAVGIFESIHAPLDP-Y-FATLL-----LGVAELGGALLCVVLIHYTGKRPLALISTGG 309 (553)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~-~~~~~-----~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~ 309 (553)
.....++..+..+.....+....|.+.++.+.+... . +.... ..++..+|+++.|+++||+|||++++.+.++
T Consensus 16 ~~~~~~~~~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~~~ 95 (434)
T PRK15075 16 AILRVTSGNFLEMFDFFLFGFYATAIAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRKGLIVTLSI 95 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHHHHHHHHHH
Confidence 445555666677777788888899888887765432 2 22111 1233357889999999999999999999998
Q ss_pred HHHHHHHHHHHHHhhcccCCCCCh--------hHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHH
Q psy15864 310 SAACFIVVAVYAQFHLSYGWDSPL--------VPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIF 381 (553)
Q Consensus 310 ~~i~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~ 381 (553)
.+++.+++++ .++.+ .+++++++.|++.+..+.... .+++|.+|++.|+.++++.....+++
T Consensus 96 ~~~~~~l~~~---------~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~-~~~~e~~p~~~rg~~~~~~~~~~~~g 165 (434)
T PRK15075 96 MASGTLLIAF---------VPGYATIGLAAPLLVLLGRLLQGFSAGVELGGVS-VYLAEIATPGRKGFYTSWQSASQQVA 165 (434)
T ss_pred HHHHHHHHHh---------CCcHHHHHHHHHHHHHHHHHHhhccccccHHHHH-HHHHhhCCcccchHHHHHHHHHHHHH
Confidence 8888887776 33333 356778888887766655554 89999999999999999988877777
Q ss_pred HHHHHHHhHHH--------HhhccchhhHHH
Q psy15864 382 AFAVNKLYYPM--------LDTFHLWGTLYF 404 (553)
Q Consensus 382 ~~i~~~~~~~~--------~~~~g~~~~~~~ 404 (553)
..+++.+.+.+ .+..+|+..+++
T Consensus 166 ~~~g~~~g~~l~~~~~~~~~~~~gWr~~f~~ 196 (434)
T PRK15075 166 VVFAALLGYLLNQWLSPAQMAEWGWRIPFLI 196 (434)
T ss_pred HHHHHHHHHHHHHhCCHHHHhccchHHHHHH
Confidence 76666655544 235666555554
No 172
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.17 E-value=2.9e-10 Score=115.73 Aligned_cols=150 Identities=13% Similarity=0.080 Sum_probs=106.8
Q ss_pred HHHHHhhCCCCC-hHHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHHHHHHHHHhhcccCCCCChhHHHH
Q psy15864 260 VGIFESIHAPLD-PYFATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAACFIVVAVYAQFHLSYGWDSPLVPTVF 338 (553)
Q Consensus 260 ~~~~~~~g~~~~-~~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (553)
+.+..+.+.+.. ..+....+.++..+..+++|+++||+|||++++++.++.+++.+++.+. .+ .++.
T Consensus 27 ~~~~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~~~~~~---------~~---~~~~ 94 (393)
T PRK11195 27 IALLKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCLLMLFG---------IH---PLLA 94 (393)
T ss_pred HHHHHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHHHHHHH---------HH---HHHH
Confidence 334445554432 3466777888999999999999999999999999998888777665442 11 1556
Q ss_pred HHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhHHHHhhccchhhHHHHHHHHHHHHhhheE
Q psy15864 339 LVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYYPMLDTFHLWGTLYFYAAISVVGTLYMYF 418 (553)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 418 (553)
+++.|++.+... +...+++.|++|++.|+++.|+......++.+++|.+.+.+.+.. +...+.+.+++. +..++.++
T Consensus 95 r~l~G~~~a~~~-pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~~-~~~~~~i~~~~~-~~~~~~~~ 171 (393)
T PRK11195 95 YGLVGIGAAAYS-PAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALADPH-AEAALAVCALIY-LLAALFNL 171 (393)
T ss_pred HHHHHHHHHHHH-HHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHH-HHHHHHHh
Confidence 667777665444 555689999999999999999999999999999999999888753 333333333322 33334446
Q ss_pred EcccCC
Q psy15864 419 VMPETE 424 (553)
Q Consensus 419 ~~pet~ 424 (553)
++||++
T Consensus 172 ~l~~~~ 177 (393)
T PRK11195 172 FIPRLG 177 (393)
T ss_pred cCCCCc
Confidence 677753
No 173
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.17 E-value=7e-10 Score=114.13 Aligned_cols=166 Identities=14% Similarity=0.060 Sum_probs=116.2
Q ss_pred hHHHHhhHHHHHHhhCCCC-ChHHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHHHHHHHHHhhcccCCC
Q psy15864 252 MTTLQTYAVGIFESIHAPL-DPYFATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAACFIVVAVYAQFHLSYGWD 330 (553)
Q Consensus 252 ~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~ 330 (553)
......+.|.+.++.+.+. +..+......++.++++++.|+++||+|||+++.++.++.+++.+++...... ...
T Consensus 33 ~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~~~~~~~~~~~~~~~~----~~~ 108 (417)
T PRK10489 33 LGLLGVAVPVQIQMMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLILLARGTCGLGFIGLALNAFL----PEP 108 (417)
T ss_pred HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEEehHHHHHHHHHHHHHHHHc----CCC
Confidence 3444555666665555432 33567777889999999999999999999999998887777766555432110 023
Q ss_pred CChhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhHHHHhhccchhhHHHHHHHHH
Q psy15864 331 SPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYYPMLDTFHLWGTLYFYAAISV 410 (553)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~~~~ 410 (553)
+.+.+++.+++.+++.+....+. .+++.+.+|++.|+++.++......++..+++.+.+.+.+..++.+.+.+.+++.+
T Consensus 109 ~~~~l~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~~~~~~~~~~~~~~~~~ 187 (417)
T PRK10489 109 SLLAIYLLGLWDGFFGSLGVTAL-LAATPALVGRENLMQAGAITMLTVRLGSVISPALGGLLIAAGGVAWNYGLAAAGTF 187 (417)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHH-hhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 44556666777777665554444 47888999999999999999889999999999999988887776666555444444
Q ss_pred HHHhhheEEcccC
Q psy15864 411 VGTLYMYFVMPET 423 (553)
Q Consensus 411 ~~~~~~~~~~pet 423 (553)
+. ++.++.+|++
T Consensus 188 ~~-~~~~~~l~~~ 199 (417)
T PRK10489 188 IT-LLPLLRLPAL 199 (417)
T ss_pred HH-HHHHHhCCCC
Confidence 33 3334556665
No 174
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.17 E-value=3.5e-10 Score=115.58 Aligned_cols=137 Identities=7% Similarity=-0.175 Sum_probs=108.5
Q ss_pred hhhHHHHhhHHHHHHhhCCCCC-hHHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHHHHHHHHHhhcccC
Q psy15864 250 GGMTTLQTYAVGIFESIHAPLD-PYFATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAACFIVVAVYAQFHLSYG 328 (553)
Q Consensus 250 ~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~ 328 (553)
..........|.+.++.+.+.. ..+..+...++.++++++.|++.||+|||+++++++++++++.+++.....
T Consensus 17 ~~~~~~~~l~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~~l~~~~~~------ 90 (410)
T TIGR00885 17 FANDITNPMVPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGAFLFWPAAE------ 90 (410)
T ss_pred HHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHh------
Confidence 3344555667877777777643 347777888999999999999999999999999999998888877544221
Q ss_pred CCCChhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhHHHH
Q psy15864 329 WDSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYYPML 393 (553)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~ 393 (553)
..+.+.+++.+++.+++.+....+.. .++.++.|++.|++..++.+.+..+|..+++.+.+.+.
T Consensus 91 ~~~~~~~l~~~~l~G~g~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~ 154 (410)
T TIGR00885 91 IMNYTLFLVGLFILTAGLGFLETAAN-PYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLI 154 (410)
T ss_pred hccHHHHHHHHHHHHhhHHHHHhhhh-HHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34566677788888888777665554 78888999999999999999999999999998888775
No 175
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.16 E-value=4.8e-10 Score=114.63 Aligned_cols=163 Identities=9% Similarity=-0.101 Sum_probs=111.8
Q ss_pred HHhhhhhHHHHhhHHHHH-HhhCCCCC-hHHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHHHHHHHHHh
Q psy15864 246 IGQFGGMTTLQTYAVGIF-ESIHAPLD-PYFATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAACFIVVAVYAQF 323 (553)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~-~~~g~~~~-~~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~ 323 (553)
+....+......++|.++ +..+.+.. ..+...+..++.+++.++.|+++||+|||++++++.++.+++.+++.+....
T Consensus 25 ~~~~~~~~~~~~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~ 104 (399)
T PRK05122 25 FISYLTIGLPLAVLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKAVVFGLCGCALSGLLYLLAGLL 104 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcchHHHHHHHHHHHHHHHHHhhhh
Confidence 333334444555666544 45665533 3477778889999999999999999999999999888777766555432210
Q ss_pred hcccCCCCChhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhHHHHhhccchhhHH
Q psy15864 324 HLSYGWDSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYYPMLDTFHLWGTLY 403 (553)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~~~g~~~~~~ 403 (553)
. .....+.+.+++.+++.|++.+...... ..++.|.+|++.|+.+.++......++..+++.+.+.+.+..+|...++
T Consensus 105 ~-~~~~~~~~~l~~~r~l~G~~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~ 182 (399)
T PRK05122 105 A-AWPVLSLLLLLLGRLLLGIGESLAGTGS-ILWGIGRVGALHTGRVISWNGIATYGALAIGAPLGVLLYHWGGLAGLGL 182 (399)
T ss_pred h-ccchhHHHHHHHHHHHHHhhHHhhcchH-HHHHHhhcChhhhccchhhhhhhhhHHHHHHHHHHHHHHHcccHHHHHH
Confidence 0 0000123456677788887766554433 4777899999999999999888888888889998888888888665554
Q ss_pred HHHHHHH
Q psy15864 404 FYAAISV 410 (553)
Q Consensus 404 ~~~~~~~ 410 (553)
+.+++.+
T Consensus 183 ~~~~~~~ 189 (399)
T PRK05122 183 LIMLLAL 189 (399)
T ss_pred HHHHHHH
Confidence 4444333
No 176
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.15 E-value=2.4e-10 Score=133.00 Aligned_cols=144 Identities=11% Similarity=-0.001 Sum_probs=103.6
Q ss_pred HHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHHHHHHHHHhhcccCCCCChhHHHHHHHHHHHHhhhhccc
Q psy15864 274 FATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAACFIVVAVYAQFHLSYGWDSPLVPTVFLVLAAFLTHICIRLL 353 (553)
Q Consensus 274 ~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (553)
+..+++.++.+++++++|+++||+|||++++++.++.+++.++..+... ..+.+.+++++++.|++.+... +.
T Consensus 51 ~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~~~~~~------~~~~~~l~~~r~l~G~~~~~~~-~~ 123 (1146)
T PRK08633 51 IVNALFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLLIVLAYY------LGWFWLAFAVTFLLGAQSAIYS-PA 123 (1146)
T ss_pred HHHHHHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHHHHHHHH------HccHHHHHHHHHHHHHHHHhhc-hH
Confidence 4555677888999999999999999999998887766655555443322 3456777888888887775554 44
Q ss_pred cceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhHHHHhh--------ccch-hhHHHHHHHHHHHHhhheEEcccCC
Q psy15864 354 PWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYYPMLDT--------FHLW-GTLYFYAAISVVGTLYMYFVMPETE 424 (553)
Q Consensus 354 ~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~~--------~g~~-~~~~~~~~~~~~~~~~~~~~~pet~ 424 (553)
..++++|++|++.|+.++|+......++.++++.+.+.+... .+++ +.+.+.+++.++++++..+++|++.
T Consensus 124 ~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (1146)
T PRK08633 124 KYGIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFLFESVNGNTPSEILGRIAPAGLVLLAVAVLGLIFAYRLPKVP 203 (1146)
T ss_pred HHhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHHHhhccccccccccchHHHHHHHHHHHHHHHHHHhcCcCCC
Confidence 458999999999999999999999999999999999888765 2222 2333333333334444445567653
No 177
>PRK09952 shikimate transporter; Provisional
Probab=99.15 E-value=5e-10 Score=115.77 Aligned_cols=177 Identities=11% Similarity=-0.041 Sum_probs=113.3
Q ss_pred HHHHHHHHHHHhhhhhHHHHhhHHHHHHh-h--CCCCChHHHH-----HHHHHHHHHHHHHHhhhhcccCCcceeecchh
Q psy15864 237 YAIVTSLFFIGQFGGMTTLQTYAVGIFES-I--HAPLDPYFAT-----LLLGVAELGGALLCVVLIHYTGKRPLALISTG 308 (553)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--g~~~~~~~~~-----~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~ 308 (553)
.++..++.++..+.....+.+..+.+... . +.+....+.. .+..++..+|+++.|+++||+|||++++++.+
T Consensus 23 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~Grr~~l~~~~~ 102 (438)
T PRK09952 23 AALGSFAGAVVDWYDFLLYGITAALVFNREFFPQVSPAMGTLAAFATFGVGFLFRPLGGVVFGHFGDRLGRKRMLMLTVW 102 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhccHHHHHHHHH
Confidence 34444444444444444455555544332 2 2332222221 12335567888999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhcccCCCCCh--------hHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHH
Q psy15864 309 GSAACFIVVAVYAQFHLSYGWDSPL--------VPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYI 380 (553)
Q Consensus 309 ~~~i~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~ 380 (553)
+.+++.+++++ .++.. .+++++++.|++.+..+... ..+++|.+|++.|+...+.......+
T Consensus 103 ~~~~~~~~~~~---------~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~-~~~~~e~~p~~~rg~~~~~~~~g~~~ 172 (438)
T PRK09952 103 MMGIATALIGL---------LPSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGA-ALLAVESAPKNKKAFYSSGVQVGYGV 172 (438)
T ss_pred HHHHHHHHHhc---------CCcHHHHHHHHHHHHHHHHHHHHhhhcccHHHH-HHHHHHhCCCCCCcHHHHHHHHHHHH
Confidence 99888888777 33433 46778888898887766555 48999999999999988888777777
Q ss_pred HHHHHHHHhHHHHh--------hccchhhHHHHHHHHHHHHhhheEEcccCC
Q psy15864 381 FAFAVNKLYYPMLD--------TFHLWGTLYFYAAISVVGTLYMYFVMPETE 424 (553)
Q Consensus 381 ~~~i~~~~~~~~~~--------~~g~~~~~~~~~~~~~~~~~~~~~~~pet~ 424 (553)
|..+++.+...+.. ..+|+..+++.++ ..+..++....+||++
T Consensus 173 G~~l~~~~~~~l~~~~~~~~~~~~gWr~~f~~~~~-~~l~~~~l~~~~~es~ 223 (438)
T PRK09952 173 GLLLSTGLVSLISMMTTDEQFLSWGWRIPFLFSIV-LVLIALWVRNGMEESA 223 (438)
T ss_pred HHHHHHHHHHHHHHhCCHHHhhccChHHHHHHHHH-HHHHHHHHHHhCCCCh
Confidence 77777665554432 3565555554433 3333333334566654
No 178
>TIGR00898 2A0119 cation transport protein.
Probab=99.14 E-value=1.7e-10 Score=121.86 Aligned_cols=153 Identities=16% Similarity=0.064 Sum_probs=111.7
Q ss_pred hHHHHHHhhCCC----CChHHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHHHHHHHHHhhcccCCCCCh
Q psy15864 258 YAVGIFESIHAP----LDPYFATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAACFIVVAVYAQFHLSYGWDSPL 333 (553)
Q Consensus 258 ~~~~~~~~~g~~----~~~~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 333 (553)
+.+.+..+.+.+ ....+..++..++.++|+++.|+++||+|||++++++.++.+++.++.++ ..+.+
T Consensus 111 ~~~~i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~---------~~~~~ 181 (505)
T TIGR00898 111 FSSTIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAF---------SPNYT 181 (505)
T ss_pred ccccEEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHH---------cccHH
Confidence 334444455553 23457777888999999999999999999999999988888888777766 56778
Q ss_pred hHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhHHHHhhccchhhHHHHHHHHHHHH
Q psy15864 334 VPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYYPMLDTFHLWGTLYFYAAISVVGT 413 (553)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 413 (553)
.+++++++.|++.+... +...+++.|.+|++.|+.+.++......+|.++++.+...+.+ |.+.+++.++..++..
T Consensus 182 ~~~~~r~l~G~~~~~~~-~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~---wr~~~~~~~i~~~~~~ 257 (505)
T TIGR00898 182 VFLVFRLLVGMGIGGIW-VQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIPD---WRWLQLAVSLPTFLFF 257 (505)
T ss_pred HHHHHHHHHHhhccchH-HHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhH---HHHHHHHHHHHHHHHH
Confidence 88888888888776554 4445899999999999999998877777777777765544333 4445555554444444
Q ss_pred hhheEEcccCC
Q psy15864 414 LYMYFVMPETE 424 (553)
Q Consensus 414 ~~~~~~~pet~ 424 (553)
+ .++++||+.
T Consensus 258 ~-~~~~~~esp 267 (505)
T TIGR00898 258 L-LSWFVPESP 267 (505)
T ss_pred H-HHHhcCCCh
Confidence 3 446789873
No 179
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.14 E-value=4.1e-10 Score=115.18 Aligned_cols=143 Identities=12% Similarity=-0.021 Sum_probs=100.9
Q ss_pred hhHHHHhhHHHHHHhhCCCC-ChHHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHHHHHHHHHhhcccCC
Q psy15864 251 GMTTLQTYAVGIFESIHAPL-DPYFATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAACFIVVAVYAQFHLSYGW 329 (553)
Q Consensus 251 ~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~ 329 (553)
+......+.+.++++.+.+. +..+......++..++.+++|+++||+|||+++..+.++.+++.+++..... ..
T Consensus 28 ~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~-----~~ 102 (402)
T TIGR00897 28 GDGLEQGWLSPFLKALGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWCVGHAAFIVFGL-----GH 102 (402)
T ss_pred hhhhHHHhHHHHHHHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhc-----cC
Confidence 33334445666667777654 3457777888999999999999999999999999988888777655432110 02
Q ss_pred CCChhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHH-HHHHHHhHHHHhhccch
Q psy15864 330 DSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFA-FAVNKLYYPMLDTFHLW 399 (553)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~-~i~~~~~~~~~~~~g~~ 399 (553)
.+.+.+++.+++.+++.+....+. ..++.+.+|++.|++++|+.+....++. .+++.+.+.+.+..++.
T Consensus 103 ~~~~~l~~~~~i~G~g~~~~~~~~-~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~~g~~ 172 (402)
T TIGR00897 103 ANYPLILLFYGIRGLGYPLFAYSF-LVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPAFGEM 172 (402)
T ss_pred ccHHHHHHHHHHHHcchHHHHhHH-HHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccchH
Confidence 345555666777666554443333 3667788999999999999998888875 56777777777666643
No 180
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.13 E-value=3.9e-10 Score=120.95 Aligned_cols=151 Identities=9% Similarity=-0.149 Sum_probs=111.9
Q ss_pred HHHHhhhhhHHHHhhHHHHHHhhCCCCC-hHHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHHHHHHHHH
Q psy15864 244 FFIGQFGGMTTLQTYAVGIFESIHAPLD-PYFATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAACFIVVAVYAQ 322 (553)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~ 322 (553)
..+........+...++.+.++.+++.. ..++.+.+.++.+++.++.++++||+|||+.+.+++++++++.+++++...
T Consensus 41 ~~~~~~~~~g~~~~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~alphf 120 (633)
T TIGR00805 41 AQLQGLLYNGLVNSSLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFLLSLPHF 120 (633)
T ss_pred HHHHHHHHHHHHHhhchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHHHhChHH
Confidence 3444444444555566666667776543 457777888999999999999999999999999999999999998876421
Q ss_pred hhccc----------------------C--------------------CCCChhHHHHHHHHHHHHhhhhccccceeecc
Q psy15864 323 FHLSY----------------------G--------------------WDSPLVPTVFLVLAAFLTHICIRLLPWMLIGE 360 (553)
Q Consensus 323 ~~~~~----------------------~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e 360 (553)
....+ . ......+++++++.|++.+..+ ++..+|+.|
T Consensus 121 ~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~-~~~~~~i~d 199 (633)
T TIGR00805 121 LSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIF-PLGISYIDD 199 (633)
T ss_pred hcCCccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcch-hcCchhhhc
Confidence 11000 0 0023445678888888765555 444599999
Q ss_pred ccccchhhhhhhHHHHHHHHHHHHHHHHhHHHHhh
Q psy15864 361 VFPNNIRATASGASGSSSYIFAFAVNKLYYPMLDT 395 (553)
Q Consensus 361 ~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~~ 395 (553)
.+|++.|+..+|+.+....+|..+++.+.+.+.+.
T Consensus 200 ~~~~~~~~~~~~i~~~~~~iG~~lG~llgg~l~~~ 234 (633)
T TIGR00805 200 FAKSKNSPLYIGILESIAVFGPAFGYLLGSFCLQI 234 (633)
T ss_pred cCCccccHHHHHHHHHHHHhhhHHHHHHHHHHHhc
Confidence 99999999999999999999999999888887643
No 181
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.13 E-value=5.9e-10 Score=116.22 Aligned_cols=152 Identities=13% Similarity=-0.023 Sum_probs=108.9
Q ss_pred HHHhhhhhHHHHhhHHHHHH-hhCCCCCh-HHHHHHHHHHHHHHHHHHhhhhcc-cCCcceeecchhHHHHHHHHHHHHH
Q psy15864 245 FIGQFGGMTTLQTYAVGIFE-SIHAPLDP-YFATLLLGVAELGGALLCVVLIHY-TGKRPLALISTGGSAACFIVVAVYA 321 (553)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~-~~g~~~~~-~~~~~~~~i~~~~g~~~~g~l~dr-~Grr~~l~~~~~~~~i~~~~~~~~~ 321 (553)
.+..-.+++.+..+++.++. ..|.+... .+....+.+...+..+++|+++|| +|||++++++.++++++.+++++
T Consensus 23 ~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~~~~g~~~~~~-- 100 (489)
T PRK10207 23 ELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIVLAIGYFMTGM-- 100 (489)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHHHHHHHHHHHHH--
Confidence 34444455555555665553 45665433 355555566666777899999999 99999999999999999888776
Q ss_pred HhhcccCCCC-ChhHHHHHHHHHHHHhhhhccccceeeccccccc--hhhhhhhHHHHHHHHHHHHHHHHhHHHHhhccc
Q psy15864 322 QFHLSYGWDS-PLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNN--IRATASGASGSSSYIFAFAVNKLYYPMLDTFHL 398 (553)
Q Consensus 322 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~--~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~~~g~ 398 (553)
..+ ...+++++.+.+++.+.... ...++++|.+|++ .|+.+.++.+...++|.+++|.+.+++.+..+|
T Consensus 101 -------~~~~~~ll~~~~~l~~ig~g~~~~-~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~~~gw 172 (489)
T PRK10207 101 -------SLLKPDLIFIALGTIAVGNGLFKA-NPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIADKFGY 172 (489)
T ss_pred -------hccchhHHHHHHHHHHhccccccC-CHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHHhhCh
Confidence 222 22344566666665554443 4458899999887 457788999999999999999999999998898
Q ss_pred hhhHHHHH
Q psy15864 399 WGTLYFYA 406 (553)
Q Consensus 399 ~~~~~~~~ 406 (553)
++.|++.+
T Consensus 173 ~~~F~i~~ 180 (489)
T PRK10207 173 SVTYNLCG 180 (489)
T ss_pred HHHHHHHH
Confidence 77776643
No 182
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.12 E-value=2.9e-10 Score=118.16 Aligned_cols=157 Identities=15% Similarity=0.060 Sum_probs=115.9
Q ss_pred HhhHHHHHHhhCCCCChHHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHHHHHHHHHhhcccCCCCChhH
Q psy15864 256 QTYAVGIFESIHAPLDPYFATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAACFIVVAVYAQFHLSYGWDSPLVP 335 (553)
Q Consensus 256 ~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 335 (553)
...++.+..+.|.+....|......++..++.++.|.++|.+|||..++++.++.+++.++.+. +++...+
T Consensus 64 a~~l~~I~~diG~~~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~at---------A~~~~~~ 134 (599)
T PF06609_consen 64 ASILPYINADIGGSDNWSWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVCAT---------AQNMNTF 134 (599)
T ss_pred HHHHHHHHHhcCCCccchHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHhhc---------CCcHHHH
Confidence 3445667777787777778888888999999999999999999999999999999999999887 7788888
Q ss_pred HHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhHHHHhhccchhhHHHHHHHHHHHHhh
Q psy15864 336 TVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYYPMLDTFHLWGTLYFYAAISVVGTLY 415 (553)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 415 (553)
+.+..+.+++.|... +....++|+.|.+.|+.+.++..........+++.+...+....+|+|.+++.+++..+.+++
T Consensus 135 iag~~l~GvgaG~~~--~~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~WRw~~~~~~i~~~i~~vl 212 (599)
T PF06609_consen 135 IAGMVLYGVGAGVQE--LAALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAAHSGWRWIFYIFIIWSGIALVL 212 (599)
T ss_pred HHHHHHHHHhhHHHH--HHHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhccCCCcchHHHHHHHHHHHHHHH
Confidence 888888888655444 333568999999999887776655444444455555544444567777777776666655544
Q ss_pred he-EEcccC
Q psy15864 416 MY-FVMPET 423 (553)
Q Consensus 416 ~~-~~~pet 423 (553)
.+ ++.|.+
T Consensus 213 ~~~fY~PP~ 221 (599)
T PF06609_consen 213 IFFFYFPPP 221 (599)
T ss_pred HHHHhCCCc
Confidence 33 334443
No 183
>KOG2615|consensus
Probab=99.12 E-value=9.6e-11 Score=111.54 Aligned_cols=140 Identities=12% Similarity=0.096 Sum_probs=105.6
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHHHHHHHHHhhcccCCCCChhHHHHHHHHHHHHhhhhcc
Q psy15864 273 YFATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAACFIVVAVYAQFHLSYGWDSPLVPTVFLVLAAFLTHICIRL 352 (553)
Q Consensus 273 ~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (553)
....+.++++.++.+++.|.++|++|||.+++++++..++..++.+. +.+...+++.+++.|++-+.. +.
T Consensus 71 GflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~---------S~~F~afv~aR~l~Gi~kgnl-~v 140 (451)
T KOG2615|consen 71 GFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWAL---------SRNFAAFVLARFLGGIFKGNL-SV 140 (451)
T ss_pred hhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHH---------HHHHHHHHHHHHhhhhccCch-HH
Confidence 36677788999999999999999999999999999998888777776 445544555588888766433 34
Q ss_pred ccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhHHHHh---hccchhhHH---HHHHHHHHHHhhheEEcccC
Q psy15864 353 LPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYYPMLD---TFHLWGTLY---FYAAISVVGTLYMYFVMPET 423 (553)
Q Consensus 353 ~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~---~~g~~~~~~---~~~~~~~~~~~~~~~~~pet 423 (553)
+ -++++|+++++.|+.+++.+.....+|-+++|.+++++.. ..+.+..++ +..++.+....+..+++|||
T Consensus 141 ~-rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~f~~~~g~~p~alP~~~v~i~a~~~v~~~~~~lpET 216 (451)
T KOG2615|consen 141 I-RAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQFSSISGSYPFALPCLLVFILAAGDVTFFPWFLPET 216 (451)
T ss_pred H-HHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHhhHhhhccCchHHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 4 4999999999999999999999999999999999999876 333222222 11222222234455789998
No 184
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.10 E-value=1.8e-10 Score=115.01 Aligned_cols=280 Identities=13% Similarity=0.135 Sum_probs=153.4
Q ss_pred cccccccccc-chhhhhhhhhccCcccccchhchhhhhHHHHHHHHHhhcccc---chHHHHHHHH---HHHHHHHHHhc
Q psy15864 90 GTFLYKMAAP-LVLVLTYVAEITQPHLRGMLSATASMTTIFGTVSQLFLGSFL---HWRSAAILNL---LFPILALCALY 162 (553)
Q Consensus 90 gr~~~G~ga~-~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~lG~~l~~~l~~~l---gWr~~f~i~~---i~~li~~i~~~ 162 (553)
-|++.|++-+ ......|+..|+|+++|+++.+++.++..+|.+++++++.++ |||+.+.+.. ....+++++.+
T Consensus 121 ~R~llGvaEA~~~A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~qll~s~gWr~y~~Ln~Isl~s~~~a~~~a~ 200 (511)
T TIGR00806 121 MEVFYSVTMAARIAYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQLLVTLGWISYSTLNIISLVFMTFSVFLAL 200 (511)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHH
Confidence 3677777633 226678999999999999999999999999999999887766 8998765542 22334456667
Q ss_pred cccCCceeeeecCChHHHHHHHHHHcCCCCCcchHHHHHHHHHHHHHHHHHhcCCCCCCChhhhhhhhhcchhHHHHHHH
Q psy15864 163 FIPESPHWLISQGRMQEASASLCWLRGWVTPDKVQTELSQITKAIEESELKRLGKDGQRRPNYRMYMRRTFLLPYAIVTS 242 (553)
Q Consensus 163 ~lpEsp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (553)
++|-.++-+.-+.+.+............ .+.+........+... ......+..-+...+..+.++...
T Consensus 201 ~LP~~~~sl~f~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-----------~~~~~~l~~~~~~~y~n~~vl~WS 268 (511)
T TIGR00806 201 FLKRPKRSLFFNRLEDVRGALPCELDQM-VPGPGGKLEDYLGTCR-----------DSFLVRMLSELVTIYRNPQLLLWS 268 (511)
T ss_pred hCCCCchhhhhccccccccccccccccC-CCCCccccchhhhhhh-----------hHHHHHHHHHHHHHhcCcchhhhh
Confidence 7885444221111100000000000000 0000000000000000 000000111122233444556667
Q ss_pred HHHHHhhhhhHHHHhhHHHHHHhhCCCCChH--HHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHHHHHHH
Q psy15864 243 LFFIGQFGGMTTLQTYAVGIFESIHAPLDPY--FATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAACFIVVAVY 320 (553)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~--~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~ 320 (553)
+++....++++-+..|...+......+.+.+ ..-.+..+.+.+++++.|++-.++.+-..+.++.+..+-+.+++..
T Consensus 269 lWwa~a~~g~~qv~~Y~Q~LW~~v~~~~~~yNG~veA~~tllga~~a~~ag~~~~~w~~~~~l~l~v~s~~~~gll~~m- 347 (511)
T TIGR00806 269 LWWVFNSAGYYLITYYVHTLWGTLDESLNKYNGAVDAASTLLGAITSFIAGFVNIRWARWSKLLIAVVSAIQAGLVFWM- 347 (511)
T ss_pred HHHHHHhhHHHHHHHHHHHHHHHcCCCccccCCHHHHHHHHHHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHhhhh-
Confidence 7777888888888888888876654322211 3334455666677788888865553322333332222222222211
Q ss_pred HHhhcccCCCCChhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHh
Q psy15864 321 AQFHLSYGWDSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLY 389 (553)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~ 389 (553)
.. .++.|+.++...++...+.+...... .-++.....+.-|...|+.+++..+...+...++
T Consensus 348 ~~------t~~Iw~~Y~~yvlf~~~y~flitia~-~~iA~~L~~~~~aLvFGiNtfvAl~LQtilT~iV 409 (511)
T TIGR00806 348 SQ------SHDIWVLYVTYVLFRGIYQFLVPIAT-FQIASSLSKELCALVFGINTFVATALKTIITAVV 409 (511)
T ss_pred hc------ccchHHHHHHHHHHHHHHHHHHHHHH-HHHHHHhcccceEEEEecHHHHHHHHHHheEEEE
Confidence 11 67888888888888887766654443 4445555555568888888887777666655433
No 185
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.10 E-value=8.6e-10 Score=107.23 Aligned_cols=179 Identities=13% Similarity=0.013 Sum_probs=134.6
Q ss_pred hHHHHHHHHHHHHhhhhhHHHHhhHHHHHHhhCCCCCh-HHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHH
Q psy15864 235 LPYAIVTSLFFIGQFGGMTTLQTYAVGIFESIHAPLDP-YFATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAAC 313 (553)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~ 313 (553)
.+.+++..+.+...++..+.+....+.+-.+.+++..+ .+...+..+.+.+..++.|++.||+|-|++..+++++.++-
T Consensus 13 ~~~L~~S~~af~v~F~VW~l~s~l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~~l~~IP 92 (417)
T COG2223 13 RRNLWLSTLAFDVGFMVWTLFSPLGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWTILSMLLLLIP 92 (417)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHHHHHHHHHHHH
Confidence 44455555556666666666666666666667776543 47777888888999999999999999999999999888888
Q ss_pred HHHHHHHHHhhcccCCCCChhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhHHHH
Q psy15864 314 FIVVAVYAQFHLSYGWDSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYYPML 393 (553)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~ 393 (553)
++.+++... ..+.+.++++.++.|++.+ .+ .+...+++..||++.+|++.|+.. .+++|..+...+.+.+.
T Consensus 93 ~~~~~~a~~------~~~~~~ll~~gll~G~~Ga-sF-av~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~ 163 (417)
T COG2223 93 CLGLAFAVT------YPSTWQLLVIGLLLGLAGA-SF-AVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVA 163 (417)
T ss_pred HHHHHHHcc------CCchHHHHHHHHHHhcccc-ee-hcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHHH
Confidence 888777432 2233577777777777543 33 344588999999999999999988 99999999999999888
Q ss_pred hhcc---chhhHHHHHHHHHHHHhhheEEccc
Q psy15864 394 DTFH---LWGTLYFYAAISVVGTLYMYFVMPE 422 (553)
Q Consensus 394 ~~~g---~~~~~~~~~~~~~~~~~~~~~~~pe 422 (553)
...+ |.....++....++..++.++++.+
T Consensus 164 ~~~g~~~w~~~~~i~~~~l~v~~v~~~~~~~d 195 (417)
T COG2223 164 VAFGFLAWRNVAGIYVVALAIAAVLAWLGMND 195 (417)
T ss_pred HHHhhHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 8888 6666777777777767777666544
No 186
>PRK12382 putative transporter; Provisional
Probab=99.09 E-value=8.7e-10 Score=112.43 Aligned_cols=152 Identities=9% Similarity=-0.154 Sum_probs=104.7
Q ss_pred hhhhHHHHhhHHHHH-HhhCCCCC-hHHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHHHHHHHHHhhcc
Q psy15864 249 FGGMTTLQTYAVGIF-ESIHAPLD-PYFATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAACFIVVAVYAQFHLS 326 (553)
Q Consensus 249 ~~~~~~~~~~~~~~~-~~~g~~~~-~~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~ 326 (553)
+.+.......+|.++ ++.|.+.. ..+..+...++.++++++.|+++||+|||++++++.+...++.+........ ..
T Consensus 28 ~~~~~~~~p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~-~~ 106 (392)
T PRK12382 28 YMTVGLPLPVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGMLACGLAGLAYLLAAIL-PV 106 (392)
T ss_pred HHHHHHHhhhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHHHHHhhhcc-cc
Confidence 333444444555543 45676543 3477778889999999999999999999999888877666554433221100 00
Q ss_pred cCCCCChhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhHHHHhhccchhhH
Q psy15864 327 YGWDSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYYPMLDTFHLWGTL 402 (553)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~~~g~~~~~ 402 (553)
....+.+.+++.+++.|.+.+...... .+++.+.+|++.|++++++......++..++|.+.+.+.+..+|...+
T Consensus 107 ~~~~~~~~l~~~r~l~G~~~~~~~~~~-~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~ 181 (392)
T PRK12382 107 SAPFKFALLVVGRLILGFGESQLLTGA-LTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLGLLLHSHFGFAALA 181 (392)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhhCCccccchhhhHHHHHHHHHHHHHHHHHHHHHhccChHHHH
Confidence 001244567778888888776554333 477789999999999999988888888889998888887777754433
No 187
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.09 E-value=8e-10 Score=112.21 Aligned_cols=146 Identities=12% Similarity=-0.088 Sum_probs=112.6
Q ss_pred HHHHHHHHhhhhhHHHHhhHHHHHHhhCCCC-ChHHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHHHHH
Q psy15864 240 VTSLFFIGQFGGMTTLQTYAVGIFESIHAPL-DPYFATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAACFIVVA 318 (553)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~ 318 (553)
..++..+...........++|.+.++.+.+. +..+......++.+++.++.|+++||+|||+.+.++.++.+++.++..
T Consensus 10 ~~~~~~~~~~~~~~~~~~~lp~~~~~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~~~~~~~~~~~~ 89 (381)
T PRK03633 10 LLLCGLLLLTLAIAVLNTLVPLWLAQEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSYYLASLIFAAGCAGLG 89 (381)
T ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3334444455556667778888888877754 345777788899999999999999999999999998888888777766
Q ss_pred HHHHhhcccCCCCChhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhHHHHhh
Q psy15864 319 VYAQFHLSYGWDSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYYPMLDT 395 (553)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~~ 395 (553)
+ .++.+.+++.+++.|++.+...... ...+.+..+++.|+.++++......++..+++.+.+.+...
T Consensus 90 ~---------~~~~~~l~~~~~l~G~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~ 156 (381)
T PRK03633 90 L---------MVGFWSWLAWRFVAGIGCAMIWVVV-ESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKVSTE 156 (381)
T ss_pred H---------hccHHHHHHHHHHHHHHHHHHHHHH-HHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 5 4567777888888888765554333 25556788889999999999999999999999888877654
No 188
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.09 E-value=8.5e-10 Score=110.29 Aligned_cols=158 Identities=10% Similarity=0.041 Sum_probs=125.9
Q ss_pred hHHHHhhHHHHHHhhCCCCCh--HHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHHHHHHHHHhhcccCC
Q psy15864 252 MTTLQTYAVGIFESIHAPLDP--YFATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAACFIVVAVYAQFHLSYGW 329 (553)
Q Consensus 252 ~~~~~~~~~~~~~~~g~~~~~--~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~ 329 (553)
-...++..|.+.+..|++... ..+...+..+.+++.+++|+++||+|-|+++.++++...+..++.++ .
T Consensus 42 R~n~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~f---------a 112 (511)
T TIGR00806 42 RPGESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLL---------G 112 (511)
T ss_pred hchHHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHH---------H
Confidence 445566677777788887654 47777888999999999999999999999999999888888888877 4
Q ss_pred CCChhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhHHHHhhccchhhH--HHHHH
Q psy15864 330 DSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYYPMLDTFHLWGTL--YFYAA 407 (553)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~~~g~~~~~--~~~~~ 407 (553)
.+...+.+.+++.|++-+..+ +. +.|+...+|++.|++++|+......+|.++++++.+. +..++|.... ..+..
T Consensus 113 ~Sl~~L~i~R~llGvaEA~~~-A~-~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~ql-l~s~gWr~y~~Ln~Isl 189 (511)
T TIGR00806 113 TSVWHMQLMEVFYSVTMAARI-AY-SSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQL-LVTLGWISYSTLNIISL 189 (511)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-HH-HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhcCchhHHHHHHHHH
Confidence 567888999999999988887 54 5899999999999999999999999999999999988 5556654432 23344
Q ss_pred HHHHHHhhheEEcc
Q psy15864 408 ISVVGTLYMYFVMP 421 (553)
Q Consensus 408 ~~~~~~~~~~~~~p 421 (553)
...++++++.+++|
T Consensus 190 ~s~~~a~~~a~~LP 203 (511)
T TIGR00806 190 VFMTFSVFLALFLK 203 (511)
T ss_pred HHHHHHHHHHHhCC
Confidence 44444455556677
No 189
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.08 E-value=6.2e-09 Score=107.16 Aligned_cols=125 Identities=13% Similarity=0.087 Sum_probs=77.9
Q ss_pred CCCCChHHHHHHHHHHHHHHHHHHhhhhcccCC--cc-----eeecchhHHHHHHHHHHHHHHhhcccCCCCChhHHHHH
Q psy15864 267 HAPLDPYFATLLLGVAELGGALLCVVLIHYTGK--RP-----LALISTGGSAACFIVVAVYAQFHLSYGWDSPLVPTVFL 339 (553)
Q Consensus 267 g~~~~~~~~~~~~~i~~~~g~~~~g~l~dr~Gr--r~-----~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (553)
|+.....+..++..+..++.+++.+++=.|..| |. -+.+++++++++.+++.+...........+.+++++..
T Consensus 305 g~~ip~~~~qslNp~~ii~l~P~~a~lw~~l~~~~~~~s~~~Kfa~g~~~~g~~f~~l~~~~~~~~~~~~~s~~wl~~~~ 384 (493)
T PRK15462 305 GYTVPTAMFQSINAFAVMLCGVFLAWVVKESVAGNRTVRIWGKFALGLGLMSAGFCILTLSARWSAMYGHSSLPLMVLGL 384 (493)
T ss_pred ceeeCHHHHHhHhHHHHHHHHHHHHHHHHHHhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHH
Confidence 444456677788777777777776666555532 21 14456666677766665433222211123445555555
Q ss_pred HHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHH-HHHHHHHHHHhHHH
Q psy15864 340 VLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSS-YIFAFAVNKLYYPM 392 (553)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~-~~~~~i~~~~~~~~ 392 (553)
++..++ -.+..|+..+.++++.|++.||..+|+..... .++..+++.+....
T Consensus 385 ~~~t~g-El~~sPvgls~~~~laP~~~~g~~mg~w~l~~~~~~~~~~g~~~~~~ 437 (493)
T PRK15462 385 AVMGFA-ELFIDPVAMSQITRIEIPGVTGVLTGIYMLLSGAIANYLAGVIADQT 437 (493)
T ss_pred HHHHHH-HHHHChHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 555554 46777888899999999999999999886533 56666665555443
No 190
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.07 E-value=1.1e-09 Score=127.01 Aligned_cols=142 Identities=11% Similarity=-0.048 Sum_probs=101.2
Q ss_pred HHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHHHHHHHHHhhcccCCCCChhHHHHHHHHHHHHhhhhccc
Q psy15864 274 FATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAACFIVVAVYAQFHLSYGWDSPLVPTVFLVLAAFLTHICIRLL 353 (553)
Q Consensus 274 ~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (553)
+...+..+..++.++++|+++||+|||+++.....+.++..++..+... ..+.+.+++++++.+++.++. .+.
T Consensus 56 l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~~~~~~~~~------~~s~~~l~~~~~l~gi~~a~~-~p~ 128 (1140)
T PRK06814 56 LAGAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIAALAIYGFH------LNSVPLLFAALFLMGIHSALF-GPI 128 (1140)
T ss_pred HHHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHH------HhhHHHHHHHHHHHHHHHHhh-chH
Confidence 4445566788899999999999999998754322222222111111111 346778888888888876555 455
Q ss_pred cceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhHHHHhhccchhhHHHHHHHHHHHHhhheEEcccC
Q psy15864 354 PWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYYPMLDTFHLWGTLYFYAAISVVGTLYMYFVMPET 423 (553)
Q Consensus 354 ~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~pet 423 (553)
..+++.+++|++.|+.++|+.+....++.+++|.+.+.+....+|...+ +.+++..++++++++++|++
T Consensus 129 ~~a~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 197 (1140)
T PRK06814 129 KYSILPDHLNKDELLGANALVEAGTFIAILLGTIIGGLATISGNFVILV-ALLMGIAVLGWLASLFIPKT 197 (1140)
T ss_pred HHHhhHhhcCccccchhhHHHHHHHHHHHHHHHHHHHHHHhccccHHHH-HHHHHHHHHHHHHHhhCCCC
Confidence 5699999999999999999999999999999999999998887765555 44445445555555666665
No 191
>PRK10133 L-fucose transporter; Provisional
Probab=99.06 E-value=2.2e-09 Score=110.72 Aligned_cols=142 Identities=6% Similarity=-0.202 Sum_probs=108.8
Q ss_pred HHHhhhhhHHHHhhHHHHHHhhCCCCCh-HHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHHHHHHHHHh
Q psy15864 245 FIGQFGGMTTLQTYAVGIFESIHAPLDP-YFATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAACFIVVAVYAQF 323 (553)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~ 323 (553)
++...........+.|.+.+..+.+... .+..+.+.++.+++.++.|+++||+|||+++.++.++.+++.+++.....
T Consensus 35 ~~~~~~~~~~~~~~~p~i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~l~~~~~~- 113 (438)
T PRK10133 35 FFLWAVANNLNDILLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAALFWPAAE- 113 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHh-
Confidence 3444444566667788887777776433 46677888999999999999999999999999999999988877532111
Q ss_pred hcccCCCCChhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhHHHH
Q psy15864 324 HLSYGWDSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYYPML 393 (553)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~ 393 (553)
+++.+.+++.+++.|++.+...... ..++.++.|.+.|+..+++.+.+..+|..+++.+.+.+.
T Consensus 114 -----a~~~~~ll~~r~l~G~g~g~~~~~~-~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l~ 177 (438)
T PRK10133 114 -----IMNYTLFLVGLFIIAAGLGCLETAA-NPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLI 177 (438)
T ss_pred -----cCCHHHHHHHHHHHHHHHHHHHhhH-HHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5567778888999998887776555 477788877777766788888888899999888776543
No 192
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.04 E-value=1.6e-09 Score=109.65 Aligned_cols=162 Identities=12% Similarity=0.003 Sum_probs=106.8
Q ss_pred HHHHhhHHHHH-HhhCCCCC-hHHHHHHHHHHHHHHHHHHhhhhcccCCcceeec-chhHHHHHHHHHHHHHHhhcccCC
Q psy15864 253 TTLQTYAVGIF-ESIHAPLD-PYFATLLLGVAELGGALLCVVLIHYTGKRPLALI-STGGSAACFIVVAVYAQFHLSYGW 329 (553)
Q Consensus 253 ~~~~~~~~~~~-~~~g~~~~-~~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~-~~~~~~i~~~~~~~~~~~~~~~~~ 329 (553)
.....++|.++ ++.+.+.. ..+......+..++..++.|+++||+|||+.+++ +.++.+++.++... .
T Consensus 14 ~~~~~~l~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~---------~ 84 (375)
T TIGR00899 14 ALQFPTLSLFLSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAALACLLFAW---------N 84 (375)
T ss_pred HHHhhHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHh---------c
Confidence 33344455444 44565433 3455666677888888999999999999887654 44444444444444 4
Q ss_pred CCChhHHHHHHHHHHHHhhhhccccceeeccccccchhhhh--hhHHHHHHHHHHHHHHHHhHHHHhhccchhhHHHHHH
Q psy15864 330 DSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATA--SGASGSSSYIFAFAVNKLYYPMLDTFHLWGTLYFYAA 407 (553)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~--~~~~~~~~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~ 407 (553)
++.+.+++.+++.+.+.+. ..+....+..|..|++.|+.+ .+.......++..+++.+.+.+.+..+|+..+++.++
T Consensus 85 ~~~~~l~~~~~~~g~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~~~~~~~f~~~~~ 163 (375)
T TIGR00899 85 RNYFLLLVLGVLLSSFAST-ANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLALGFGFTVMFLTAAL 163 (375)
T ss_pred chHHHHHHHHHHHHhhhhh-hHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHHhcccHHHHHHHHH
Confidence 4556666666665554433 334444667788777766644 4666667788899999999988888887777777777
Q ss_pred HHHHHHhhheEEcccCC
Q psy15864 408 ISVVGTLYMYFVMPETE 424 (553)
Q Consensus 408 ~~~~~~~~~~~~~pet~ 424 (553)
+.++..++.++++||.+
T Consensus 164 ~~~~~~~~~~~~~~~~~ 180 (375)
T TIGR00899 164 AFVLCGVLVWLFLPSYP 180 (375)
T ss_pred HHHHHHHHHHHhCCCcc
Confidence 66666666666678753
No 193
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.03 E-value=2.7e-09 Score=111.85 Aligned_cols=156 Identities=10% Similarity=-0.097 Sum_probs=105.2
Q ss_pred HHHHHhhhhhHHHHhhHHHHH-HhhCCCCChH-HHHHHHHHHHHHHHHHHhhhhcc-cCCcceeecchhHHHHHHHHHHH
Q psy15864 243 LFFIGQFGGMTTLQTYAVGIF-ESIHAPLDPY-FATLLLGVAELGGALLCVVLIHY-TGKRPLALISTGGSAACFIVVAV 319 (553)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~-~~~~~~~i~~~~g~~~~g~l~dr-~Grr~~l~~~~~~~~i~~~~~~~ 319 (553)
+..++...+++.+..+++.++ +..|.+.... +......+......+++|+++|| +|||++++++.++.+++.+++.+
T Consensus 28 ~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~~~ig~~l~~~ 107 (500)
T PRK09584 28 SIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAIGYALVAW 107 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHH
Confidence 333444445556666777776 4566654433 33334344444445789999999 59999999999888888776665
Q ss_pred HHHhhcccCCCCChhHHHHHHHHHHHHhhhhccccceeeccccccch--hhhhhhHHHHHHHHHHHHHHHHhHHHHhhcc
Q psy15864 320 YAQFHLSYGWDSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNI--RATASGASGSSSYIFAFAVNKLYYPMLDTFH 397 (553)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~--Rg~~~~~~~~~~~~~~~i~~~~~~~~~~~~g 397 (553)
. ....+.+++.+.+.+++.+... +...+++++.+|++. |+.+.++.+...++|++++|.+.+++.+..+
T Consensus 108 ~--------~~~~~~l~~~~~l~gig~g~~~-~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l~~~~g 178 (500)
T PRK09584 108 S--------GHDAGIVYMGMATIAVGNGLFK-ANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPWLAAKYG 178 (500)
T ss_pred h--------cccHHHHHHHHHHHHHhhhccc-CCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 1 1223344455566666555444 344478899998643 4457788888999999999999999998888
Q ss_pred chhhHHHHHH
Q psy15864 398 LWGTLYFYAA 407 (553)
Q Consensus 398 ~~~~~~~~~~ 407 (553)
|+..|.+.++
T Consensus 179 ~~~~F~i~~i 188 (500)
T PRK09584 179 WSVAFALSVV 188 (500)
T ss_pred HHHHHHHHHH
Confidence 7777766554
No 194
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=99.02 E-value=2e-08 Score=98.14 Aligned_cols=245 Identities=16% Similarity=0.080 Sum_probs=149.2
Q ss_pred hhhhhhhhccCcccccchhchhhhhHHHHHHHHHhhcccc-----chHHHHHH--HHHHHHHHHHHhccccCCceeeeec
Q psy15864 102 LVLTYVAEITQPHLRGMLSATASMTTIFGTVSQLFLGSFL-----HWRSAAIL--NLLFPILALCALYFIPESPHWLISQ 174 (553)
Q Consensus 102 ~~~~~i~e~~p~~~Rg~~~~~~~~~~~lG~~l~~~l~~~l-----gWr~~f~i--~~i~~li~~i~~~~lpEsp~~l~~~ 174 (553)
...++++|..|+++|+++.++..++..+|.+++.++.+.+ .=|..-.+ .+++.+++.++..+=.|...-....
T Consensus 109 ~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s~~rL~~v~~~~a~i~~~l~~ia~wg~E~r~~~~~~ 188 (403)
T PF03209_consen 109 SFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFSPERLIQVIQGVALIALLLNLIALWGQEPRRSRRAA 188 (403)
T ss_pred HHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccccc
Confidence 3448899999999999999999999999999998877654 22222222 2222333322333322321100000
Q ss_pred CChHHHHHHHHHHcCCCCCcchHHHHHHHHHHHHHHHHHhcCCCCCCChhhhhhhhhcchhHHHHHHHHHHHHhhhhhHH
Q psy15864 175 GRMQEASASLCWLRGWVTPDKVQTELSQITKAIEESELKRLGKDGQRRPNYRMYMRRTFLLPYAIVTSLFFIGQFGGMTT 254 (553)
Q Consensus 175 ~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (553)
.. + .........+..+...+..+++++..++..+..+.--..
T Consensus 189 ~~-----------------~---------------------~~~~~f~~a~~~~~~~~~a~~f~~fl~l~t~a~~~QD~i 230 (403)
T PF03209_consen 189 AA-----------------E---------------------RPRPPFREAWRQVWASPQARRFFVFLFLGTLAFFMQDVI 230 (403)
T ss_pred CC-----------------C---------------------CCCccHHHHHHHHHhCCChhHHHHHHHHHHHHHHhhHHH
Confidence 00 0 000011122333444444555554444433333221122
Q ss_pred HHhhHHHHHHhhCCCC-ChHHHHHHHHHHHHHHHHHHhhhhc-ccCCcceeecchhHHHHHHHHHHHHHHhhcccCCCCC
Q psy15864 255 LQTYAVGIFESIHAPL-DPYFATLLLGVAELGGALLCVVLIH-YTGKRPLALISTGGSAACFIVVAVYAQFHLSYGWDSP 332 (553)
Q Consensus 255 ~~~~~~~~~~~~g~~~-~~~~~~~~~~i~~~~g~~~~g~l~d-r~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 332 (553)
+-.|.- +..|++. ++.......+.+.++|..+.|++.. +.+.+++..+++.+.+++..++.+... ..+.
T Consensus 231 LEPygg---~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a~~------~~~~ 301 (403)
T PF03209_consen 231 LEPYGG---EVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALIILAGP------LGSP 301 (403)
T ss_pred cCCchh---HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHh------cccc
Confidence 222222 2235543 3345666778888999988888766 677777777777777777766555432 4567
Q ss_pred hhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhHHHHh
Q psy15864 333 LVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYYPMLD 394 (553)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~ 394 (553)
+.+....+++|++.|....... +.+.++..++..|+.+|.......+...++..+.+.+.|
T Consensus 302 ~~~~~~~~l~G~g~G~f~vgal-s~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D 362 (403)
T PF03209_consen 302 WLFRPGVFLLGLGNGLFTVGAL-SLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRD 362 (403)
T ss_pred hHHHHHHHHHHHhhhHHHHHHH-HHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888888899988877765554 677888888888999999888888888888877777664
No 195
>KOG3764|consensus
Probab=99.01 E-value=4.3e-10 Score=107.81 Aligned_cols=146 Identities=12% Similarity=-0.029 Sum_probs=127.9
Q ss_pred ChHHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHHHHHHHHHhhcccCCCCChhHHHHHHHHHHHHhhhh
Q psy15864 271 DPYFATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAACFIVVAVYAQFHLSYGWDSPLVPTVFLVLAAFLTHICI 350 (553)
Q Consensus 271 ~~~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (553)
+..+......+..++.+++.|.+.||+|+|..+++|+.++..+.+++++ ..+.++++++|.+-|++.+...
T Consensus 107 ~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFaf---------g~sy~~l~vAR~LQgvgsA~~~ 177 (464)
T KOG3764|consen 107 QIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAF---------GNSYPMLFVARSLQGVGSAFAD 177 (464)
T ss_pred chhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHH---------cchhHHHHHHHHHhhhhHHHHH
Confidence 3456777788999999999999999999999999999999999999998 6778899999999999887666
Q ss_pred ccccceeeccccccch-hhhhhhHHHHHHHHHHHHHHHHhHHHHhhccchhhHHHHHHHHHHHHhhheEEcccCCCC
Q psy15864 351 RLLPWMLIGEVFPNNI-RATASGASGSSSYIFAFAVNKLYYPMLDTFHLWGTLYFYAAISVVGTLYMYFVMPETEGR 426 (553)
Q Consensus 351 ~~~~~~~~~e~~p~~~-Rg~~~~~~~~~~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~pet~~~ 426 (553)
.+- .+++++.+|.+. ||.++|+...+..+|-.++|.++|.+++..|...+|+++++++++-.++.++.++.++..
T Consensus 178 tsg-lamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~vi~p~~~~ 253 (464)
T KOG3764|consen 178 TSG-LAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGALQLLVIEPTEMD 253 (464)
T ss_pred hhh-HHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHHHHHHHHHHHHheeCccccC
Confidence 554 488999999865 799999999999999999999999999999999999999999998888887777665443
No 196
>KOG2532|consensus
Probab=98.99 E-value=3.1e-09 Score=108.82 Aligned_cols=158 Identities=11% Similarity=0.041 Sum_probs=130.6
Q ss_pred ChHHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHHHHHHHHHhhcccCCCCChhHHHHHHHHHHHHhhhh
Q psy15864 271 DPYFATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAACFIVVAVYAQFHLSYGWDSPLVPTVFLVLAAFLTHICI 350 (553)
Q Consensus 271 ~~~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (553)
+..++.+....|.+++.+.+|+++||+|-|+++.++.++.+++.++..+.. ..+.+.+++.+++.|++.+..+
T Consensus 74 ~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa-------~~~~~~~~~~R~lqGl~~g~~~ 146 (466)
T KOG2532|consen 74 EKGLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAA-------SIGFYLLLVLRFLQGLGQGVLF 146 (466)
T ss_pred HHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHH-------HhcchhhHHHHHHhHHHHhHHH
Confidence 345778888999999999999999999999999999999888888877654 3344577899999999998887
Q ss_pred ccccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhHHHHhh-ccchhhHHHHHHHHHHHHhhheEEcccC----CC
Q psy15864 351 RLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYYPMLDT-FHLWGTLYFYAAISVVGTLYMYFVMPET----EG 425 (553)
Q Consensus 351 ~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~pet----~~ 425 (553)
..+. .+.+..+|+..|++..++.....++|.+++-++.|.+.+. .||...+.+.+++.++..++.+++..++ +.
T Consensus 147 pa~~-~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~~~d~P~~h~~ 225 (466)
T KOG2532|consen 147 PAIG-SILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLFYSDSPSKHPN 225 (466)
T ss_pred hhhh-ceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHhcCCcccCCC
Confidence 6664 8899999999999999999999999999999999999988 8999999999999888888776666544 22
Q ss_pred CChHHHHHHHh
Q psy15864 426 RTLRDIEEHFA 436 (553)
Q Consensus 426 ~~~~~~~~~~~ 436 (553)
.+.+|.+...+
T Consensus 226 is~~El~~I~~ 236 (466)
T KOG2532|consen 226 ISEKELKYIEK 236 (466)
T ss_pred CCHHHHHHHHh
Confidence 33445444433
No 197
>PRK11010 ampG muropeptide transporter; Validated
Probab=98.95 E-value=7.6e-09 Score=108.35 Aligned_cols=172 Identities=13% Similarity=0.021 Sum_probs=113.3
Q ss_pred HHHHhhhhhHHHHhhHHHHHHhhCCCCChHHHHHHHHHHHHHHHHHHhhhhccc-----CCcce-eecchhHHHHHHHHH
Q psy15864 244 FFIGQFGGMTTLQTYAVGIFESIHAPLDPYFATLLLGVAELGGALLCVVLIHYT-----GKRPL-ALISTGGSAACFIVV 317 (553)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~g~~~~g~l~dr~-----Grr~~-l~~~~~~~~i~~~~~ 317 (553)
..+.+..........+|.++...|.+..........+.. .++.++.|+++||+ |||+. ++++.++.+++.+.+
T Consensus 20 l~~~~gl~~~~~~~~l~~~l~~~g~~~~~ig~~~~~~~~-~~~~~l~gpl~Dr~~~~~~Grrr~~ll~~~i~~~~~~~~~ 98 (491)
T PRK11010 20 LGFASGLPLALTSGTLQAWMTVENIDLKTIGFFSLVGQA-YVFKFLWSPLMDRYTPPFLGRRRGWLLATQLLLLVAIAAM 98 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-HHHHHHHHHHHHcccccCCCCchHHHHHHHHHHHHHHHHH
Confidence 334444455566667778877777654333222222222 26889999999999 99886 545555555555555
Q ss_pred HHHHHhhcccCCCCChhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhHHHHh-hc
Q psy15864 318 AVYAQFHLSYGWDSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYYPMLD-TF 396 (553)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~-~~ 396 (553)
++.. +..+.+.+.+.+++.+++.+... +...+++.|.+|++.|+.+.++......++..+++.+.+.+.+ ..
T Consensus 99 a~~~------~~~~l~~l~~~~~l~~~~~a~~~-i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg~~l~~~l~~~~~ 171 (491)
T PRK11010 99 GFLE------PGTQLRWLAALAVVIAFCSASQD-IVFDAWKTDVLPAEERGAGAAISVLGYRLAMLVSGGLALWLADRYL 171 (491)
T ss_pred HHcC------CcchHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 4421 12344555556666666654433 3445899999999999999999999999999999988888887 45
Q ss_pred cchhhHHHHHHHHHHHHhhheEEcccCC
Q psy15864 397 HLWGTLYFYAAISVVGTLYMYFVMPETE 424 (553)
Q Consensus 397 g~~~~~~~~~~~~~~~~~~~~~~~pet~ 424 (553)
+|...+++.+++.++..+.. +++||+.
T Consensus 172 GWr~~f~i~a~l~ll~~l~~-~~~~e~~ 198 (491)
T PRK11010 172 GWQGMYWLMAALLIPCIIAT-LLAPEPT 198 (491)
T ss_pred CHHHHHHHHHHHHHHHHHHH-HhcCCCc
Confidence 77777777666655554443 3467763
No 198
>KOG0253|consensus
Probab=98.94 E-value=6.8e-09 Score=98.51 Aligned_cols=166 Identities=14% Similarity=0.021 Sum_probs=120.0
Q ss_pred hhHHHHHHhhCCCC-ChHHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHHHHHHHHHhhcccCCCCChhH
Q psy15864 257 TYAVGIFESIHAPL-DPYFATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAACFIVVAVYAQFHLSYGWDSPLVP 335 (553)
Q Consensus 257 ~~~~~~~~~~g~~~-~~~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 335 (553)
...|..-...+.+. +..+......++.++|+...|.++|++|||+...+.++..++...+-+. +.+...+
T Consensus 99 ~i~~~l~~~w~~s~~q~~llt~~v~~gmllga~~w~l~~d~~grr~~f~~T~l~t~v~~~is~~---------spnf~~L 169 (528)
T KOG0253|consen 99 LILPALDEVWGPSEGQAPLLTLSVFLGMLVGAMVWGLSADTIGRRKGFNLTFLVTGVFGVISGA---------SPNFASL 169 (528)
T ss_pred HHHHHHHhhhchhhhhhhHHHHHHHhhhhhhhhhhheehhhhhcchhhhhhHHHHHHHHHhhcC---------CCCeehh
Confidence 33444333344332 3446677788999999999999999999999998888777777666665 6777888
Q ss_pred HHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhHHHHhhccchhhHHHHHHHHHHHHhh
Q psy15864 336 TVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYYPMLDTFHLWGTLYFYAAISVVGTLY 415 (553)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 415 (553)
++++.+.+++.|. .|...++-.|..|...|+..+-+. +...+|.+....+.-..+...||. .++.+..+++..+..
T Consensus 170 ~~f~~l~~~g~gg--~pv~~~~yle~lp~~~r~~~~V~~-~~waig~v~ea~law~vm~~~gwr-~~l~~~~~pl~~~a~ 245 (528)
T KOG0253|consen 170 CVFRALWGFGVGG--LPVDSAIYLEFLPSSHRWLLTVMS-FFWAIGQVFEALLAWGVMSNFGWR-YLLFTSSTPLMFAAR 245 (528)
T ss_pred hHHHHHHhccCCC--ccHhHHHHHHhccCcCCCcchhHH-HHHHHHHHHHHHHHHHHHHhhhHH-HHHHHHHhHHHHHHH
Confidence 8888888887765 344446668999999999877666 667777777777666677777754 455555577777777
Q ss_pred heEEcccC------CCCChHHHHHHH
Q psy15864 416 MYFVMPET------EGRTLRDIEEHF 435 (553)
Q Consensus 416 ~~~~~pet------~~~~~~~~~~~~ 435 (553)
.++++||+ +|++.++++.+.
T Consensus 246 f~~w~~ESpRf~~~~G~~~kAletL~ 271 (528)
T KOG0253|consen 246 FLVWVYESPRFYLAKGDDYKALETLH 271 (528)
T ss_pred HHhhcccCcchhhhcCChHHHHHHHH
Confidence 78899998 555656555443
No 199
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=98.93 E-value=6.5e-09 Score=104.46 Aligned_cols=134 Identities=16% Similarity=-0.005 Sum_probs=102.1
Q ss_pred hHHHHhhHHHHHHhhCCCCC-hHHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHHHHHHHHHhhcccCCC
Q psy15864 252 MTTLQTYAVGIFESIHAPLD-PYFATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAACFIVVAVYAQFHLSYGWD 330 (553)
Q Consensus 252 ~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~ 330 (553)
+......+|.+.++.+.+.. ..+...+..++..++.++.|+++||+|||+++.++.++.+++.++. . ..
T Consensus 16 ~~~~~~~lp~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~---------~~ 85 (355)
T TIGR00896 16 LTSVGPLLPQIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR-S---------AP 85 (355)
T ss_pred cccCcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH-H---------hc
Confidence 34445677888888887644 3477778889999999999999999999999888877766665544 2 44
Q ss_pred CChhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhHHHHhhcc
Q psy15864 331 SPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYYPMLDTFH 397 (553)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~~~g 397 (553)
+.+.+++.+++.+++.+......+ .++.+.+| +.|+.+.++.+....++..+++.+.+.+.+..+
T Consensus 86 ~~~~l~~~~~~~g~g~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~ 150 (355)
T TIGR00896 86 GTALLFAGTALIGVGIAIINVLLP-SLIKRDFP-QRVGLMTGLYSMALMGGAALAAAATVPLAQHSG 150 (355)
T ss_pred cHHHHHHHHHHHHHHHHHHhccch-HHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 566777778888887766554443 67778776 578999999999888999999988888776543
No 200
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.91 E-value=3.3e-08 Score=101.43 Aligned_cols=188 Identities=13% Similarity=-0.021 Sum_probs=114.5
Q ss_pred HHHHHHHHHHHHhhhhhHHHHhhHHHHHHhhCCCCCh-HHHHHHHHHHHHHHHHHHhhhhc----ccCCcceeecc-hhH
Q psy15864 236 PYAIVTSLFFIGQFGGMTTLQTYAVGIFESIHAPLDP-YFATLLLGVAELGGALLCVVLIH----YTGKRPLALIS-TGG 309 (553)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~i~~~~g~~~~g~l~d----r~Grr~~l~~~-~~~ 309 (553)
+++.++.+....+++ +.....+++.+++..|.+... .+..++..+..++..++.|+++| |+|||+.++++ .+.
T Consensus 5 ~li~~~~~~~Giq~~-~~l~~~~l~~yl~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~ 83 (477)
T TIGR01301 5 KLLRVASVAAGVQFG-WALQLSLLTPYVQELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAAL 83 (477)
T ss_pred HHHHHHHHHHHHHHH-HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHH
Confidence 334444444444443 455556666677777775432 35566677888999999999999 59999988765 444
Q ss_pred HHHHHHHHHHHHHhhcc---c--CCCCC---hhHHHHHHHHHHHHhhhhccccceeeccccccchh--hhhhhHHHHHHH
Q psy15864 310 SAACFIVVAVYAQFHLS---Y--GWDSP---LVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIR--ATASGASGSSSY 379 (553)
Q Consensus 310 ~~i~~~~~~~~~~~~~~---~--~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R--g~~~~~~~~~~~ 379 (553)
.+++.+++.+....... . ..... +..+++..+..++......+.. ++++|++|++.| +.+.++...+..
T Consensus 84 ~~~~l~ll~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~r-ALiaDl~p~~~~~~~~a~~~~~~~~~ 162 (477)
T TIGR01301 84 VAFAVILIGFAADIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCR-AFLADLTGGDARRTRIANAYFSFFMA 162 (477)
T ss_pred HHHHHHHHHhCchhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHH-HhcccccCchhHHHHHHHHHHHHHHH
Confidence 44444444332110000 0 00001 2223333344445555555554 899999998866 568888888888
Q ss_pred HHHHHHHHHhHHH--Hhhc-------------cchhhHHHHHHHHHHHHhhheEEcccCCC
Q psy15864 380 IFAFAVNKLYYPM--LDTF-------------HLWGTLYFYAAISVVGTLYMYFVMPETEG 425 (553)
Q Consensus 380 ~~~~i~~~~~~~~--~~~~-------------g~~~~~~~~~~~~~~~~~~~~~~~pet~~ 425 (553)
+|+++++.+.++. .... +....|.+.+++.++..++.+++.+|..-
T Consensus 163 lG~ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~~ 223 (477)
T TIGR01301 163 IGNVLGYAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENPL 223 (477)
T ss_pred HHHHHHHHHHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccCC
Confidence 8888888777653 1111 23445666667777777888888999653
No 201
>TIGR00901 2A0125 AmpG-related permease.
Probab=98.89 E-value=8.4e-09 Score=103.67 Aligned_cols=162 Identities=12% Similarity=0.015 Sum_probs=102.1
Q ss_pred HHHhhHHHHHHhhCCCCChHHHHHHHHHHHHHHHHHHhhhhccc-----CCccee-ecchhHHHHHHHHHHHHHHhhccc
Q psy15864 254 TLQTYAVGIFESIHAPLDPYFATLLLGVAELGGALLCVVLIHYT-----GKRPLA-LISTGGSAACFIVVAVYAQFHLSY 327 (553)
Q Consensus 254 ~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~g~~~~g~l~dr~-----Grr~~l-~~~~~~~~i~~~~~~~~~~~~~~~ 327 (553)
.+....|.+.++.|.+.+.........+...+ .++.|+++||+ |||+.+ +.+.++.+++.+++++..
T Consensus 6 ~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~------ 78 (356)
T TIGR00901 6 LVGNTLPYWLRSKNVSLKTIGFFSLVGLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLV------ 78 (356)
T ss_pred hHHhHHHHHHHHcCCCHHHHHHHHHHHHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCC------
Confidence 34455677777777765443222222333343 88999999998 888874 455555555544444311
Q ss_pred CCCCChhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhHHHHhhcc--------ch
Q psy15864 328 GWDSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYYPMLDTFH--------LW 399 (553)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~~~g--------~~ 399 (553)
+..+.+.+....++.+++.+.. .+...+++.|.+|++.|+.+.++......+|.++++.+.+.+....+ |.
T Consensus 79 ~~~~l~~l~~~~~~~~~~~~~~-~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~wr 157 (356)
T TIGR00901 79 PSTDLPLLAGLAFLIAFFSATQ-DIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITLWG 157 (356)
T ss_pred cchhHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccH
Confidence 0123333444444444443333 34445788999999999999999999999999999999888877776 66
Q ss_pred hhHHHHHHHHHHHHhhheEEcccC
Q psy15864 400 GTLYFYAAISVVGTLYMYFVMPET 423 (553)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~~~pet 423 (553)
..+++.+++.++..++.++..||+
T Consensus 158 ~~f~i~ai~~l~~~~~~~~~~~e~ 181 (356)
T TIGR00901 158 YIFFWTALLILPGLLVTLFLAKEP 181 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCC
Confidence 666666655555444444456765
No 202
>KOG3626|consensus
Probab=98.88 E-value=4.5e-08 Score=102.75 Aligned_cols=205 Identities=16% Similarity=0.200 Sum_probs=123.8
Q ss_pred cccccccccc--chhhhhhhhhccCcccccchhchhhhhHHHHHHHHHhhcccc-----------------------chH
Q psy15864 90 GTFLYKMAAP--LVLVLTYVAEITQPHLRGMLSATASMTTIFGTVSQLFLGSFL-----------------------HWR 144 (553)
Q Consensus 90 gr~~~G~ga~--~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~lG~~l~~~l~~~l-----------------------gWr 144 (553)
+.++.|+|+. .++..+|+-|....++-..++|++.....+|+++|.++++++ -|.
T Consensus 243 ~q~l~GIG~Tpi~tlGisYiDDnvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWW 322 (735)
T KOG3626|consen 243 GQLLLGIGATPIFTLGISYIDDNVKKKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWW 322 (735)
T ss_pred HHHHhhcCCCCCccCCCccccccccccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHH
Confidence 5678899985 568889999999999999999999999999999999888754 377
Q ss_pred HHHHHHHHHHHHHHHHhccccCCceeeeecCChHHHHHHHHHHcCCCCCcchHHHHHHHHHHHHHHHHHhcCCCCCCChh
Q psy15864 145 SAAILNLLFPILALCALYFIPESPHWLISQGRMQEASASLCWLRGWVTPDKVQTELSQITKAIEESELKRLGKDGQRRPN 224 (553)
Q Consensus 145 ~~f~i~~i~~li~~i~~~~lpEsp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (553)
.-|++.+.+.++..+.++++|....- ..+..++++ ................. ......
T Consensus 323 lGFLi~g~~~~~~a~p~f~fPk~lp~---~~~~~~~~~-~~~~k~~~~~~~~~~~~------------------~~~ikd 380 (735)
T KOG3626|consen 323 LGFLICGALLLFSAVPLFFFPKELPK---SQKRKRARD-LHVLKTESGGAKSDKTF------------------GKKIKD 380 (735)
T ss_pred HHHHHHHHHHHHHHHHHHhCcccCcc---ccccchhhh-hcccccccccccCCcch------------------hhhHHH
Confidence 77778888887777777777654321 000000000 00000000000000000 000012
Q ss_pred hhhhhhhcchhHHHHHHHHHHHHhhhhhHHHHhhHHHHHHh-hCCCCChH--HHHHHHHHHHHHHHHHHhhhhcccC--C
Q psy15864 225 YRMYMRRTFLLPYAIVTSLFFIGQFGGMTTLQTYAVGIFES-IHAPLDPY--FATLLLGVAELGGALLCVVLIHYTG--K 299 (553)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~--~~~~~~~i~~~~g~~~~g~l~dr~G--r 299 (553)
+....++....++++...+........+..+..|+|-+++. ++.+.... +...+...+..+|.+++|++..|+. -
T Consensus 381 fp~s~~~ll~N~if~~~~l~~~~~~~~~~G~~tFlPKyLE~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfkl~~ 460 (735)
T KOG3626|consen 381 FPKSIKRLLSNPIFMLVVLASVIESLAITGYITFLPKYLETQFGISASLANILTGSIGVPAAAVGIFLGGLIIKKFKLSA 460 (735)
T ss_pred HHHHHHHHhcCchHHHHHHHHHHHHHHHhhHHHhhHHHHHHHcCCCHHHHHHHhhhhhhhhhhhhhhccceeeeeecccH
Confidence 22233444455566677777777778888889999999864 56543322 2233444556788899999999874 3
Q ss_pred cceeecchhHHHHHHHH
Q psy15864 300 RPLALISTGGSAACFIV 316 (553)
Q Consensus 300 r~~l~~~~~~~~i~~~~ 316 (553)
|.+..+.++...++.+.
T Consensus 461 r~~a~~~~~~~~l~l~~ 477 (735)
T KOG3626|consen 461 RGAAKFVIVCSVLSLLF 477 (735)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 44444444444333333
No 203
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=98.87 E-value=2e-08 Score=102.73 Aligned_cols=174 Identities=17% Similarity=0.092 Sum_probs=114.5
Q ss_pred HHHHHHhhhhhHHHHhhHHHHHHhhCCCCChHHHHHHHHHHHHHHHHHHhhhhccc-----CCcc-eeecchhHHHHHHH
Q psy15864 242 SLFFIGQFGGMTTLQTYAVGIFESIHAPLDPYFATLLLGVAELGGALLCVVLIHYT-----GKRP-LALISTGGSAACFI 315 (553)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~g~~~~g~l~dr~-----Grr~-~l~~~~~~~~i~~~ 315 (553)
+..++.+.........-+|.++++.|++.+..-........ .+..++.|+++||+ |||+ .++++.++.+++..
T Consensus 5 ~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~ig~~~~~~~~-~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~~~ 83 (402)
T PRK11902 5 LLLGFASGLPLALTSGTLQAWMTVEGLDIQTIGFFSLVGQA-YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAASIA 83 (402)
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH-HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHHHH
Confidence 33455566667777788899998888875544222222222 57789999999999 8876 56666666666666
Q ss_pred HHHHHHHhhcccCCCCChhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhHHHHhh
Q psy15864 316 VVAVYAQFHLSYGWDSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYYPMLDT 395 (553)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~~ 395 (553)
++++... ..+.+.+++..++.+++.+ ...+...+++.|.+|++.|+.+.++......++..+++.+.+.+.+.
T Consensus 84 ~l~~~~~------~~~~~~l~~~~~~~~~~~~-~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~ 156 (402)
T PRK11902 84 AMAFCPP------HAALWPLAGLAVLVAFLSA-SQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLADR 156 (402)
T ss_pred HHHhcCc------cchHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHHhc
Confidence 5554210 1233444444445444433 33344458899999999999999999888888999988888887775
Q ss_pred -ccchhhHHHHHHHHHHHHhhheEEcccCC
Q psy15864 396 -FHLWGTLYFYAAISVVGTLYMYFVMPETE 424 (553)
Q Consensus 396 -~g~~~~~~~~~~~~~~~~~~~~~~~pet~ 424 (553)
.+|...+++.+++.++..+ ..+++||+.
T Consensus 157 ~~gw~~~f~i~a~~~l~~~l-~~~~~~e~~ 185 (402)
T PRK11902 157 VLGWGNTYLLMAGLMLAGAL-TTLWAPEPE 185 (402)
T ss_pred ccCHHHHHHHHHHHHHHHHH-HHHhcCCCc
Confidence 3666666666665554443 335567653
No 204
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=98.85 E-value=2e-08 Score=102.11 Aligned_cols=132 Identities=11% Similarity=-0.003 Sum_probs=91.2
Q ss_pred HHHHHHHHHHhhhhcccCCcceeecchhHHHHHHHHHHHHHHhhcccCCCCCh--------hHHHHHHHHHHHHhhhhcc
Q psy15864 281 VAELGGALLCVVLIHYTGKRPLALISTGGSAACFIVVAVYAQFHLSYGWDSPL--------VPTVFLVLAAFLTHICIRL 352 (553)
Q Consensus 281 i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~ 352 (553)
++.++++++.|+++||+|||++++++.++..++.+++.+ ..+.. .+++.+++.|++.+.....
T Consensus 46 ~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~ 116 (394)
T TIGR00883 46 LARPLGAIVFGHFGDRIGRKKTLVITLLMMGIGTLLIGL---------LPSYATIGIWAPILLLLARLIQGFSLGGEWGG 116 (394)
T ss_pred HHhhhHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHhh---------CCChhhhHHHHHHHHHHHHHHHHhhccccccc
Confidence 344578899999999999999999999888888877766 32322 3566677777766555544
Q ss_pred ccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhHHHH--------hhccchhhHHHHHHHHHHHHhhheEEcccC
Q psy15864 353 LPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYYPML--------DTFHLWGTLYFYAAISVVGTLYMYFVMPET 423 (553)
Q Consensus 353 ~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~--------~~~g~~~~~~~~~~~~~~~~~~~~~~~pet 423 (553)
. .++++|.+|++.|+...++......+|..+++.+...+. +..+|...+.+.+++. +..++....+||+
T Consensus 117 ~-~~~~~~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~-~~~~~~~~~~~~~ 193 (394)
T TIGR00883 117 A-ALYLAEYAPPGKRGFYGSFQQVGAPVGLLLAALTVLLLSYLLGDDALLEWGWRIPFLVSAVLV-LIGLYLRRNLEET 193 (394)
T ss_pred c-HHHhhhcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhhccchHHHHHHHHHHH-HHHHHHHHhcCCC
Confidence 4 488999999999999999988888888888887665543 2345444444433333 3333333445554
No 205
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=98.85 E-value=2.8e-08 Score=103.68 Aligned_cols=174 Identities=16% Similarity=0.076 Sum_probs=116.8
Q ss_pred cchhHHHHHHHHHHHHhhhhhHHHHhhHHHHHHhhCCCCChHHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHH
Q psy15864 232 TFLLPYAIVTSLFFIGQFGGMTTLQTYAVGIFESIHAPLDPYFATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSA 311 (553)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~ 311 (553)
+.++.+++...+..++.......+..++. +..+.+....+......+..++.++++|.++||+.||++++.+-++.+
T Consensus 10 ~~Fr~lw~a~~iS~lG~~~~~va~~wlv~---~lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~drrrili~~~~~~~ 86 (524)
T PF05977_consen 10 RNFRRLWIAQLISNLGDWMQTVALAWLVT---QLTGSPLMVALVQAASTLPILLLSLFAGALADRFDRRRILILSQLLRA 86 (524)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHH
Confidence 33444444444444444433333333222 222222223355555667778889999999999999999999888777
Q ss_pred HHHHHHHHHHHhhcccCCCCChhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhHH
Q psy15864 312 ACFIVVAVYAQFHLSYGWDSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYYP 391 (553)
Q Consensus 312 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~ 391 (553)
+..++++++... +..+.+.+++..++.+++.++. .|...+++.|++|.+....+.++.....++..+++|.+.|.
T Consensus 87 ~~~~~L~~l~~~----~~~~~~~Ll~~~fl~g~~~a~~-~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPalgG~ 161 (524)
T PF05977_consen 87 LVALLLAVLAFF----GLLSPWLLLILTFLLGIGSAFF-NPAWQAIIPELVPKEDLPAANALNSISFNIARIIGPALGGI 161 (524)
T ss_pred HHHHHHHHHHHh----CcCCHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchHHHH
Confidence 666665554331 1345666777777777766444 45556899999999999999999999999999999999999
Q ss_pred HHhhccchhhHHHHHHHHHHHH
Q psy15864 392 MLDTFHLWGTLYFYAAISVVGT 413 (553)
Q Consensus 392 ~~~~~g~~~~~~~~~~~~~~~~ 413 (553)
++...|....+.+-++..++..
T Consensus 162 Lva~~G~~~~f~inalsfl~~i 183 (524)
T PF05977_consen 162 LVAFFGAAAAFLINALSFLISI 183 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 9888876666665554444433
No 206
>PRK15011 sugar efflux transporter B; Provisional
Probab=98.84 E-value=4e-08 Score=100.14 Aligned_cols=161 Identities=12% Similarity=-0.013 Sum_probs=95.8
Q ss_pred HHHHhhHHHHH-HhhCCCCCh-HHHHHHH-HHHHHHHHHHHhhhhcccCCcceee-cchhHHHHHHHHHHHHHHhhcccC
Q psy15864 253 TTLQTYAVGIF-ESIHAPLDP-YFATLLL-GVAELGGALLCVVLIHYTGKRPLAL-ISTGGSAACFIVVAVYAQFHLSYG 328 (553)
Q Consensus 253 ~~~~~~~~~~~-~~~g~~~~~-~~~~~~~-~i~~~~g~~~~g~l~dr~Grr~~l~-~~~~~~~i~~~~~~~~~~~~~~~~ 328 (553)
..+..+++.++ ++.+.+... .+..... .++.+++.+++++ +||+|||+.++ .+.++..++.+++.+
T Consensus 32 ~~~~p~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~g~r~~~~~~~~~~~~~~~~~~~~--------- 101 (393)
T PRK15011 32 ALQTPTLSIFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGR-SDKRGDRKSLIVFCCLLGVLACTLFAW--------- 101 (393)
T ss_pred HHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-HhcccchhHHHHHHHHHHHHHHHHHHH---------
Confidence 33344444444 455654433 2333333 3455566666666 99999998754 444443444444333
Q ss_pred CCCChhHHHHHHHHHHHHhhhhccccceeeccccccchhh--hhhhHHHHHHHHHHHHHHHHhHHHHhhccchhhHHHHH
Q psy15864 329 WDSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRA--TASGASGSSSYIFAFAVNKLYYPMLDTFHLWGTLYFYA 406 (553)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg--~~~~~~~~~~~~~~~i~~~~~~~~~~~~g~~~~~~~~~ 406 (553)
..+.+.+++...+.+...+ ...+....+..+..+++.|. ...++.+....++.+++|.+.+.+.+..+|...+++.+
T Consensus 102 ~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~l~~~~gw~~~f~~~~ 180 (393)
T PRK15011 102 NRNYFVLLFVGVFLSSFGS-TANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYALAMGFSFTVMYLSAA 180 (393)
T ss_pred hhHHHHHHHHHHHHHHHHH-hhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcChHHHHHHHH
Confidence 3344444444444443333 33344445666666555443 23366677788999999999999888888887777777
Q ss_pred HHHHHHHhhheEEcccCC
Q psy15864 407 AISVVGTLYMYFVMPETE 424 (553)
Q Consensus 407 ~~~~~~~~~~~~~~pet~ 424 (553)
++.++.+++.++++||.+
T Consensus 181 ~~~~~~~~~~~~~~~~~~ 198 (393)
T PRK15011 181 VAFIVCGVMVWLFLPSMR 198 (393)
T ss_pred HHHHHHHHHHHhhcCccC
Confidence 777777676677788764
No 207
>PRK09528 lacY galactoside permease; Reviewed
Probab=98.81 E-value=5.1e-08 Score=100.41 Aligned_cols=169 Identities=8% Similarity=-0.086 Sum_probs=95.4
Q ss_pred HHhhhhhHHHHhhHHHHHHh-hCCCC-ChHHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHHHHHHHHHh
Q psy15864 246 IGQFGGMTTLQTYAVGIFES-IHAPL-DPYFATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAACFIVVAVYAQF 323 (553)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~-~g~~~-~~~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~ 323 (553)
+...........+++.++.+ .|.+. +..+..++..++.+++.++.|+++||+|||++++++..+.+++...+.....
T Consensus 20 ~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~- 98 (420)
T PRK09528 20 FFFFFIWSSWFSFFPIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKLGLKKHLLWIISGLLVLFGPFFIYVF- 98 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHH-
Confidence 33333344455566666655 67654 3457777888999999999999999999999987765554443322211100
Q ss_pred hcccCCCCCh-hHHHHHHHHHHHHhhhhccccceeeccccc--cchhhhhhhHHHHHHHHHHHHHHHHhHHHHhhccchh
Q psy15864 324 HLSYGWDSPL-VPTVFLVLAAFLTHICIRLLPWMLIGEVFP--NNIRATASGASGSSSYIFAFAVNKLYYPMLDTFHLWG 400 (553)
Q Consensus 324 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p--~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~~~g~~~ 400 (553)
..... ......++.++..+.++.... ..+....+ .+.++..+|.......++..+++.+.+.+.+ .++..
T Consensus 99 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~-~~~~~ 171 (420)
T PRK09528 99 -----APLLQYNILLGAIVGGIYLGFGFLAGA-GAIEAYIERVSRRSGFEYGRARMWGSLGWALCAFIAGILFN-INPQI 171 (420)
T ss_pred -----HHHHHHHHHHHHHHHHHHhhhhhccch-hhhhhHHHHHHhhccccchhhHHhhhHHHHHHHHHHHHHHh-cCchH
Confidence 00000 011112222222222222211 12222222 2345667788888888999999999888765 35566
Q ss_pred hHHHHHHHHHHHHhhheEEccc
Q psy15864 401 TLYFYAAISVVGTLYMYFVMPE 422 (553)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~pe 422 (553)
.+++.++++++..++.++..|+
T Consensus 172 ~f~~~~~~~~~~~~~~~~~~~~ 193 (420)
T PRK09528 172 NFWLGSGSALILLVLLFFAKPD 193 (420)
T ss_pred hHHHHHHHHHHHHHHHhccccc
Confidence 6666555555555555444444
No 208
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=98.78 E-value=1.1e-09 Score=114.35 Aligned_cols=291 Identities=15% Similarity=0.157 Sum_probs=2.7
Q ss_pred ccccccccccc--chhhhhhhhhccCcccccchhchhhhhHHHHHHHHHhhcccc----------------------chH
Q psy15864 89 KGTFLYKMAAP--LVLVLTYVAEITQPHLRGMLSATASMTTIFGTVSQLFLGSFL----------------------HWR 144 (553)
Q Consensus 89 ~gr~~~G~ga~--~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~lG~~l~~~l~~~l----------------------gWr 144 (553)
-|.++.|+|+. .++..+|+-|.++++.-+.++|++.++..+|+++|.++++.+ .|-
T Consensus 146 ~gq~l~GiG~~pl~tLG~tYiDDnv~~~~splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~Wv 225 (539)
T PF03137_consen 146 LGQLLIGIGATPLYTLGITYIDDNVSKKNSPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWV 225 (539)
T ss_dssp ------SSS-----------------------------------------------------------------------
T ss_pred HHHHHHhccccCCccceeeeeccccccccCccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHH
Confidence 36788899886 668899999999999999999999999999999998888754 243
Q ss_pred HH----HHHHHHHHHHHHHHhccccCCceeeeecCChHHHHHHHHHHcCCCCCcchHHHHHHHHHHHHHHHHHhcCCCCC
Q psy15864 145 SA----AILNLLFPILALCALYFIPESPHWLISQGRMQEASASLCWLRGWVTPDKVQTELSQITKAIEESELKRLGKDGQ 220 (553)
Q Consensus 145 ~~----f~i~~i~~li~~i~~~~lpEsp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (553)
.+ |++.+++.++..+.++++|...+-. ++..++.+....+. .... .+...+... ......
T Consensus 226 GAWWLGfli~g~~~~l~aipl~~FPk~lp~~--~~~~~~~~~~~~~~-----~~~~-------~~~~~~~~~--~~~~~~ 289 (539)
T PF03137_consen 226 GAWWLGFLICGILLFLSAIPLFFFPKKLPGT--SERQEEKESSERKE-----EDSD-------KDSFKDPKS--KKSFGK 289 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCccCCCc--ccccchhhhhhcch-----hhhh-------hhccccccc--ccchhh
Confidence 34 4444444444444444455432110 00000000000000 0000 000000000 000000
Q ss_pred CChhhhhhhhhcchhHHHHHHHHHHHHhhhhhHHHHhhHHHHHHh-hCCCCCh-H-HHHHHHHHHHHHHHHHHhhhhccc
Q psy15864 221 RRPNYRMYMRRTFLLPYAIVTSLFFIGQFGGMTTLQTYAVGIFES-IHAPLDP-Y-FATLLLGVAELGGALLCVVLIHYT 297 (553)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~-~-~~~~~~~i~~~~g~~~~g~l~dr~ 297 (553)
....+....++....+.++...+...........+..|+|-+++. ++.+... . +...+...++++|.+++|++..|+
T Consensus 290 ~~~df~~~l~~Ll~Np~f~~~~la~~~~~~~~~G~~tF~pKylE~QF~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~ 369 (539)
T PF03137_consen 290 SIKDFPKALKRLLTNPVFMCLILAGVFESFIVSGFATFLPKYLESQFGLSASQASLLTGIVSIPGAALGILLGGYIVKKF 369 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred hhhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHhhhhcchhheehheEEEEEEEe
Confidence 112222223344455556666666666777777888889988864 4443222 2 333344457788999999999987
Q ss_pred C--CcceeecchhHHHHHHHHHHHHHHhh----------ccc----------------------------------C-CC
Q psy15864 298 G--KRPLALISTGGSAACFIVVAVYAQFH----------LSY----------------------------------G-WD 330 (553)
Q Consensus 298 G--rr~~l~~~~~~~~i~~~~~~~~~~~~----------~~~----------------------------------~-~~ 330 (553)
. .|.++.+.++..+++.+++....... ..+ + ..
T Consensus 370 kl~~~~~~~~~~v~~~v~~~~~~~~~~~~C~~~~~aGv~~~y~~~~~~~~~~~~~~~Cn~~~~~~~~~a~~G~C~~~C~~ 449 (539)
T PF03137_consen 370 KLSARGAAKFCIVVSIVSVILYSPLFFLGCPNPPIAGVTVPYHNSTSSSPSCNLTCSCNSCCSSGNGSATPGKCPSDCCN 449 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cCcHHHHHHHHHHHHHHHHHHHHHHHeecCCCCceeeecCccccccCCCCCCCCCCCCCCccCCCcccccCCCcCccccc
Confidence 4 34454444444444333311111000 000 0 01
Q ss_pred CChhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHH-HHHHHHHHHhHHHHhhc
Q psy15864 331 SPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSY-IFAFAVNKLYYPMLDTF 396 (553)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~-~~~~i~~~~~~~~~~~~ 396 (553)
....+++..++..+..+....|.. ..+-..+|++.|+.++|+...+.+ ++.+-+|.++|.++|..
T Consensus 450 ~~~~Fl~~~~~~~~~~~~~~~p~~-~i~LR~V~~~~rs~AlGv~~~~~rllg~IPgPIifG~iiD~t 515 (539)
T PF03137_consen 450 KLIPFLILLFILSFFTFMSQVPST-LITLRCVPPEQRSFALGVQWLIIRLLGFIPGPIIFGAIIDST 515 (539)
T ss_dssp -------------------------------------------------------------------
T ss_pred ccHHHHHHHHHHHHHHHhcccchh-eeeeccCChhhcchhhhHHHHHHHhhcCcchHHHHhHHHhhh
Confidence 122233333344444444444443 555688999999999999987765 45578888889888763
No 209
>KOG2504|consensus
Probab=98.73 E-value=3.3e-08 Score=102.64 Aligned_cols=179 Identities=15% Similarity=0.089 Sum_probs=136.4
Q ss_pred hhHHHHHHHHHHHHhhhhhHHHHhhHHHHHHhhCCCCC-hHHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHH
Q psy15864 234 LLPYAIVTSLFFIGQFGGMTTLQTYAVGIFESIHAPLD-PYFATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAA 312 (553)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i 312 (553)
-|...+..++..+..+.....+..+.+.+.+..+.+.. ..|+.++......+.+++.+.+.||+|.|.+.+++.++..+
T Consensus 44 gWvV~~a~fl~~~~~~g~~~~~Gv~~~~~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~i~G~~v~~~ 123 (509)
T KOG2504|consen 44 GWVVVFASFLVNLSTDGLINSFGLLFEELMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRFGCRTVMIAGGLVAAL 123 (509)
T ss_pred eeeeeHhHHHHHHhhhcchheehhhHHHHHHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhcCchHHHHHHHHHHHH
Confidence 33344444455555555555555666777776665443 56888888888888899999999999999999999999999
Q ss_pred HHHHHHHHHHhhcccCCCCChhHHH-HHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhHH
Q psy15864 313 CFIVVAVYAQFHLSYGWDSPLVPTV-FLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYYP 391 (553)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~ 391 (553)
++++..+ +.+.|.+++ ..++.|++.++.+.+.. +.+. .+..+.|+.+.|+......+|.++.|.+..+
T Consensus 124 g~~lssF---------~~~i~~l~lt~gvi~G~G~~~~~~pai-viv~-~YF~kkR~lA~Gia~~GsG~G~~~~~~l~~~ 192 (509)
T KOG2504|consen 124 GLLLSSF---------ATSLWQLYLTFGVIGGLGLGLIYLPAV-VILG-TYFEKKRALATGIAVSGTGVGTVVFPPLLKY 192 (509)
T ss_pred HHHHHHH---------HhhHHHHHHHHHHHhhccchhhhcchh-hhhh-hHhHHHHHHHHhhhhccCCcceeeHHHHHHH
Confidence 9998887 555555544 45666777777776664 5555 4556889999999999999999999999999
Q ss_pred HHhhccchhhHHHHHHHHHHHHhhheEEcccC
Q psy15864 392 MLDTFHLWGTLYFYAAISVVGTLYMYFVMPET 423 (553)
Q Consensus 392 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~pet 423 (553)
+++..||+..+++++.+.+-.++....+.|.+
T Consensus 193 l~~~~G~r~~~l~~~~~~l~~~~~~~~~rp~~ 224 (509)
T KOG2504|consen 193 LLSKYGWRGALLIFGGISLNVLVAGALLRPLS 224 (509)
T ss_pred HHHHhCcHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 99999999999998888877777666666644
No 210
>KOG2533|consensus
Probab=98.72 E-value=3.5e-08 Score=101.46 Aligned_cols=143 Identities=10% Similarity=0.008 Sum_probs=115.5
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHHHHHHHHHhhcccCCCCChhHHHHHHHHHHHHhhhhcc
Q psy15864 273 YFATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAACFIVVAVYAQFHLSYGWDSPLVPTVFLVLAAFLTHICIRL 352 (553)
Q Consensus 273 ~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (553)
.....++.++.++|.++++.+.||++ +-.++..+.+++.+++++..+ ..+.+.+++.+++.|++-+.++.+
T Consensus 84 ~~~~t~F~v~Yii~~~p~~~L~~r~~----ls~~l~~~~~~w~~~~~~~~~-----~~s~~~~ialr~llGl~es~~wP~ 154 (495)
T KOG2533|consen 84 GVLDTVFYVGYIIGQFPSGLLGDRFP----LSKGLSVSGILWGLFGFLTAA-----VHSFPGLIALRFLLGLFESGGWPG 154 (495)
T ss_pred hhHHHHHHHHHHHHHhhHHHHHHhCC----hHHHHHHHHHHHHHHHHHHHH-----HhhhHHHHHHHHHHHHHhcccchH
Confidence 46777889999999999999999999 333444444555444433322 456788899999999999888876
Q ss_pred ccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhHHHH------hhccchhhHHHHHHHHHHHHhhheEEcccCCC
Q psy15864 353 LPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYYPML------DTFHLWGTLYFYAAISVVGTLYMYFVMPETEG 425 (553)
Q Consensus 353 ~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~------~~~g~~~~~~~~~~~~~~~~~~~~~~~pet~~ 425 (553)
.. .+++..+..+.||.-+|+.++...+|+++++++...+. ...||.+.|++-+++.++..+++++++|+...
T Consensus 155 ~~-~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~~f~~lp~~P~ 232 (495)
T KOG2533|consen 155 VV-AILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIVVFFFLPDNPS 232 (495)
T ss_pred HH-HHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHheEEEEecCChh
Confidence 65 89999999999999999999999999999998887753 34678889999999999999999999998644
No 211
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=98.72 E-value=1e-07 Score=97.38 Aligned_cols=180 Identities=11% Similarity=-0.007 Sum_probs=101.1
Q ss_pred HHHHHHHHHhhhhhHHHHhhHHHHHHh-hCCCC-ChHHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHHH
Q psy15864 239 IVTSLFFIGQFGGMTTLQTYAVGIFES-IHAPL-DPYFATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAACFIV 316 (553)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~-~~~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~ 316 (553)
+.+....++.+.+...+..++|.++.+ .+.+. +..+...+..++.+++.++.|+++||+|||+.++.++++.+++...
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~ 84 (396)
T TIGR00882 5 WMFGLFFFLYFFIMSAYFPFFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHLLWIISGLLVLFAP 84 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHH
Confidence 334344444445555555566666543 56653 3346777888999999999999999999999988766655544333
Q ss_pred HHHHHHhhcccCCCCChhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhHHHHhhc
Q psy15864 317 VAVYAQFHLSYGWDSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYYPMLDTF 396 (553)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 396 (553)
........ .......+..++.+++.+++.+...... ..+..+..+ .++...|.....+.+|..++|.+.+.+.+ .
T Consensus 85 ~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~--~~~~~~g~~~~~~~~g~~~g~~~~g~l~~-~ 159 (396)
T TIGR00882 85 FFIYVFGP-LLQSNILVGAIVGGLYLGFVFSAGAGAI-EAYIEKVSR--NSNFEYGKARMFGCVGWALCASIAGILFS-I 159 (396)
T ss_pred HHHHHhhh-HHHHHHHHHHHHHHHHHHHHhccchhhH-HHHHHHhhh--hcccccchhhhhcccHHHHHHHHHhhhhc-c
Confidence 22211000 0000011122233344444443333222 244444322 23445667777788888999988876654 5
Q ss_pred cchhhHHHHHHHHHHHHhhheEEcccC
Q psy15864 397 HLWGTLYFYAAISVVGTLYMYFVMPET 423 (553)
Q Consensus 397 g~~~~~~~~~~~~~~~~~~~~~~~pet 423 (553)
++...+++.+++.++..++.+...|+.
T Consensus 160 ~~~~~f~~~~~~~~~~~~~~~~~~~~~ 186 (396)
T TIGR00882 160 DPQIVFWLGSGFALILMLLLMFAKPKA 186 (396)
T ss_pred CchHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 666666666666555555444444443
No 212
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=98.70 E-value=1.6e-07 Score=95.42 Aligned_cols=167 Identities=13% Similarity=-0.048 Sum_probs=103.4
Q ss_pred HHHhhhhhHHHHhhHHHHHHhhCCCCC-hHHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchh-HHHHHHHHHHHHHH
Q psy15864 245 FIGQFGGMTTLQTYAVGIFESIHAPLD-PYFATLLLGVAELGGALLCVVLIHYTGKRPLALISTG-GSAACFIVVAVYAQ 322 (553)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~-~~~i~~~~~~~~~~ 322 (553)
++..+.+...+..++|.++++.+.+.. ..+...+..++.+++.++.|+++||+||+........ ..++..+.+.. .
T Consensus 13 ~~~~~~~~g~~~p~l~~~l~~~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~--~ 90 (382)
T PRK11128 13 YFGYFFAYGVFLPFWSVWLKGQGYTPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLLFAVAFWF--G 90 (382)
T ss_pred HHHHHHHHHHHhhhHHHHHHhcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHH--h
Confidence 333444455666777788877776543 3466777788889999999999999999532111111 11111111111 0
Q ss_pred hhcccCCCCChhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhHHHHhhccchhhH
Q psy15864 323 FHLSYGWDSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYYPMLDTFHLWGTL 402 (553)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~~~g~~~~~ 402 (553)
.++.+.+++.+++.+++.+... +...+++.+. .+.|+.+.+.....+.++..++|.+.+.+.+..+|...+
T Consensus 91 ------~~~~~~l~i~~~l~g~~~~~~~-~~~~a~~~~~--~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~~g~~~~f 161 (382)
T PRK11128 91 ------AHSFWLLFVAIGLFNLFFSPLV-PLTDALANTW--QKQIGLDYGKVRLWGSIAFVIGSALTGKLVSWFGEQAIL 161 (382)
T ss_pred ------cccHHHHHHHHHHHHHHHcccc-cHHHHHHHHH--HhhccCCcchHHHHHHHHHHHHHHHHHHHHHHcChhHHH
Confidence 3456666666776666554433 3333555544 345788888888889999999999999999988877666
Q ss_pred HHHHHHHHHHHhhheEEcccC
Q psy15864 403 YFYAAISVVGTLYMYFVMPET 423 (553)
Q Consensus 403 ~~~~~~~~~~~~~~~~~~pet 423 (553)
++.++..++. ++..++.|+.
T Consensus 162 ~~~~~~~~~~-~~~~~~~~~~ 181 (382)
T PRK11128 162 WILTAGVASM-LLGQLLRPTI 181 (382)
T ss_pred HHHHHHHHHH-HHHHHccCCC
Confidence 6555433333 3333445654
No 213
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=98.69 E-value=1.6e-07 Score=95.37 Aligned_cols=154 Identities=12% Similarity=0.001 Sum_probs=100.6
Q ss_pred HHHHhhhhhHHHHhhHHHHHHhhCCCCC-hHHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHH-HHHHHHHHHH
Q psy15864 244 FFIGQFGGMTTLQTYAVGIFESIHAPLD-PYFATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSA-ACFIVVAVYA 321 (553)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~-i~~~~~~~~~ 321 (553)
.++..+.+......++|.++++.|.+.. ..+...+..+..+++.++.|.++||+||+......+.+.. +..+.+..
T Consensus 12 ~~~~~~~~~~~~~p~l~~~l~~~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~l~~~~~~~-- 89 (382)
T TIGR00902 12 GFFGYFCAYGIFLPFFPAWLKGIGLGEEMIGLLIGAALIARFAGGLFFAPLIKDANHIIIALRLLALASAIFAAAFSA-- 89 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHH--
Confidence 3444445556666778888888887643 3466667788888999999999999998543221111111 11111111
Q ss_pred HhhcccCCCCChhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhHHHHhhccchhh
Q psy15864 322 QFHLSYGWDSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYYPMLDTFHLWGT 401 (553)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~~~g~~~~ 401 (553)
. .++.+.+++.+.+.+.+.+.. .+...++..+ ..+.|+..+|.....+.+|.+++|.+.+.+.+..+|...
T Consensus 90 ~------~~~~~~l~~~~~l~~~~~~~~-~p~~~al~~~--~~~~~~~~~g~~~~~~slG~~~g~~l~g~l~~~~g~~~~ 160 (382)
T TIGR00902 90 G------AHNAWLLFIAIGLFALFFSAG-MPIGDALANT--WQKQFGLDYGKVRLIGSAAFIIGSALFGGLIGMFDEQNI 160 (382)
T ss_pred h------hhhHHHHHHHHHHHHHHHccc-hhHHHHHHHH--HHHHcCCCccHHHHHHHHHHHHHHHHHHHHHHHcChhHH
Confidence 0 445666666666666555443 3444455443 246789999999999999999999999999998887776
Q ss_pred HHHHHHH
Q psy15864 402 LYFYAAI 408 (553)
Q Consensus 402 ~~~~~~~ 408 (553)
+.+..++
T Consensus 161 f~~~~~~ 167 (382)
T TIGR00902 161 LAILTAG 167 (382)
T ss_pred HHHHHHH
Confidence 6655444
No 214
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=98.62 E-value=1.8e-06 Score=86.45 Aligned_cols=319 Identities=11% Similarity=-0.000 Sum_probs=161.6
Q ss_pred hhhhhhhhhccCcc--cccchhchhhhhHHHHHHHHHhhcccc----chHHHHHHHHHHHHHHHHHhcccc----CCc--
Q psy15864 101 VLVLTYVAEITQPH--LRGMLSATASMTTIFGTVSQLFLGSFL----HWRSAAILNLLFPILALCALYFIP----ESP-- 168 (553)
Q Consensus 101 ~~~~~~i~e~~p~~--~Rg~~~~~~~~~~~lG~~l~~~l~~~l----gWr~~f~i~~i~~li~~i~~~~lp----Esp-- 168 (553)
+.+.++++|.+|++ +|-...+++.++.++|.+++|++..++ ||...|.+.++-..+.++..+..+ .++
T Consensus 136 ~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~~~~~~~~g~~~gF~~aavGm~~gl~~f~~~~r~~~~~~~~ 215 (498)
T COG3104 136 PNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPIITGLLAINYGWHVGFGLAAVGMIIGLVIFLLGRRHVKGIGGV 215 (498)
T ss_pred ccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHccchhcCCCCC
Confidence 35668899999853 577788889999999999999988877 999999988776666554443332 111
Q ss_pred --eeeeecCC-hHHHHHHHHHHcCCC-CCcchHHHHHHHHHHHHHHHHH--hcCCCCCCChhhhhhhhhcchhHHHHHHH
Q psy15864 169 --HWLISQGR-MQEASASLCWLRGWV-TPDKVQTELSQITKAIEESELK--RLGKDGQRRPNYRMYMRRTFLLPYAIVTS 242 (553)
Q Consensus 169 --~~l~~~~~-~~~a~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (553)
......+. ..........+.... -.-.....+............. -.......... ....+-....++++...
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~er~r~~~~~~Lfl~~~ 294 (498)
T COG3104 216 PDPNPLSFNFLLPVLGGLVVMILAALLTLLLNQNTFSGVLLVISILIAIIYFAEAFRSPKVF-DERRRLLAAIPLFLFAV 294 (498)
T ss_pred CCccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccH-HHHHHHHHHHHHHHHHH
Confidence 00001000 000001100000000 0000000000000000000000 00000000000 11111111222333334
Q ss_pred HHHHHhhhhhHHHHhhHHHHHHh--hCCCCChHHHHHHHHHHHHHHHHHHhhhhcccCCc---ce----eecchhHHHHH
Q psy15864 243 LFFIGQFGGMTTLQTYAVGIFES--IHAPLDPYFATLLLGVAELGGALLCVVLIHYTGKR---PL----ALISTGGSAAC 313 (553)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~--~g~~~~~~~~~~~~~i~~~~g~~~~g~l~dr~Grr---~~----l~~~~~~~~i~ 313 (553)
+++..+.-..+.+..|.....+. .|++....+..++..+.-++.+++..++.-+++++ +. +-++++++..+
T Consensus 295 iFW~~~~Q~~ssl~~~a~~~v~~~~~g~~vp~~~fQslNp~~Iii~~pI~a~l~~~l~~~~~~ps~~~KFalGl~l~g~~ 374 (498)
T COG3104 295 IFWALYEQMGSSLNLYADRNVNRQIFGFEVPPAWFQSLNPFFIILFSPILAALWTKLGRGNKQPSTPIKFALGLILAGLG 374 (498)
T ss_pred HHHHHHHhccchHHHHHHHhhcccccceecCHHHHHhhCHHHHHHHHHHHHHHHhHhhcCCCCCCcchHHHHHHHHHHHH
Confidence 44444444455555665555432 33445666777777777777777777777765443 11 23445555555
Q ss_pred HHHHHHHHHhhcc-cCCCCChhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhHH-
Q psy15864 314 FIVVAVYAQFHLS-YGWDSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYYP- 391 (553)
Q Consensus 314 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~- 391 (553)
++++.....+... ....+.++++...++.+++ -.+..++...+++...|+...+..+++.......+..++..+.+.
T Consensus 375 fl~l~~~~~~~~~~~~~~s~~~lil~y~l~s~g-EL~iSpvGLs~~t~laP~~~~s~~ma~wfLt~a~~~~l~g~va~~~ 453 (498)
T COG3104 375 FLILLLAGIWFGGPSGLVSVWWLVLSYVLQSFG-ELFISPVGLSMVTKLAPPALKSFIMAMWFLTVAAGQTLGGQVAGLT 453 (498)
T ss_pred HHHHHHHHHhhcCCCCCcCHHHHHHHHHHHHHH-HHHhCHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhhceecccc
Confidence 5555444222221 2234455555555555554 477778888899999999998988888877777777777666552
Q ss_pred -----HHhhccchhhHHHHHHHHHHHHhhheEEcc
Q psy15864 392 -----MLDTFHLWGTLYFYAAISVVGTLYMYFVMP 421 (553)
Q Consensus 392 -----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p 421 (553)
..+.......|..++.+.+++.++.+...|
T Consensus 454 ~~~~~~~~~~~~~~~F~~~g~v~i~~~~~~~~~~~ 488 (498)
T COG3104 454 AVTDPAYTAFIEGRVFGTIGVVAIVIGILLLLLSP 488 (498)
T ss_pred cccchhhhhhhhhhhHHHHHHHHHHHHHHHHHhhH
Confidence 222333344555555555555554443333
No 215
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=98.61 E-value=4.1e-07 Score=94.15 Aligned_cols=164 Identities=13% Similarity=0.116 Sum_probs=99.3
Q ss_pred hhHHHHHH-hhCCCC-ChHHHHHHHHHHHHHHHHHHhhhhcc----cCCcc-eeecchhHHHHHHHHHHHHHHhhcccCC
Q psy15864 257 TYAVGIFE-SIHAPL-DPYFATLLLGVAELGGALLCVVLIHY----TGKRP-LALISTGGSAACFIVVAVYAQFHLSYGW 329 (553)
Q Consensus 257 ~~~~~~~~-~~g~~~-~~~~~~~~~~i~~~~g~~~~g~l~dr----~Grr~-~l~~~~~~~~i~~~~~~~~~~~~~~~~~ 329 (553)
.|++.++. ..|.+. ...+..++..+..++..++.|+++|| +|||+ .++++.++.+++.+++...+... ..
T Consensus 20 ~~l~~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~~~~~~---~~ 96 (437)
T TIGR00792 20 TYLLFFYTDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFTTPDFS---AT 96 (437)
T ss_pred HHHHHHHHHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHhCCCCC---cc
Confidence 34444443 456543 23466667778899999999999998 67755 45566666666655554421100 00
Q ss_pred CCChhHHHHHHHHHHHHhhhhccccceeecccc-ccchhhhhhhHHHHHHHHHHHHHHHHhHHHHh-------hccchhh
Q psy15864 330 DSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVF-PNNIRATASGASGSSSYIFAFAVNKLYYPMLD-------TFHLWGT 401 (553)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~-------~~g~~~~ 401 (553)
...+..++..++++.+.+....+. .++..|+. +++.|+...++......+++.+++.+.+.+.. ..+|...
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~-~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~~g~~~~ 175 (437)
T TIGR00792 97 GKLVYAYITYILLGLFYSFVNIPY-WSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGGDDKFGWFMF 175 (437)
T ss_pred hHHHHHHHHHHHHHHHHHhhcccH-hhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccHHHH
Confidence 011233333444454444333333 36777876 56889999888888888887777766666553 2345555
Q ss_pred HHHHHHHHHHHHhhheEEcccCC
Q psy15864 402 LYFYAAISVVGTLYMYFVMPETE 424 (553)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~~pet~ 424 (553)
+.+.+++.++..++.+++.||+.
T Consensus 176 ~~i~~~l~~~~~~~~~~~~~e~~ 198 (437)
T TIGR00792 176 ALVLALIGVVSLIICFFGTKERY 198 (437)
T ss_pred HHHHHHHHHHHHHHHHcCCEecC
Confidence 66666666666666667777754
No 216
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=98.55 E-value=7.2e-07 Score=83.12 Aligned_cols=173 Identities=15% Similarity=0.095 Sum_probs=109.4
Q ss_pred HHHHHHhhhhhHHHHhhHHHHHHhhCCCCChH-HHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHHHHHHH
Q psy15864 242 SLFFIGQFGGMTTLQTYAVGIFESIHAPLDPY-FATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAACFIVVAVY 320 (553)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~ 320 (553)
.++.....+..+.+..|.|.+.+..+++.++. .......+|..+| +++|.+.|++|.+.+++++.+...++..++...
T Consensus 8 ~~~v~~~~Gt~Y~Fs~yS~~Lk~~l~~sq~~l~~l~~~~~~G~~~G-~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l~ 86 (250)
T PF06813_consen 8 SIWVQLCSGTTYTFSAYSPQLKSRLGYSQSQLNTLSTAGDIGSYFG-ILAGLLYDRFGPWVVLLIGAVLGFVGYGLLWLA 86 (250)
T ss_pred HHHHHHhcCcccchhhhhHHHHHHhCCCHHHHHHHHHHHHHHhhcc-HHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHH
Confidence 33334444567888899999998888875544 4444556776665 888999999999999999999998888877654
Q ss_pred HHhhcccCCCCChhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhHHHHhhccchh
Q psy15864 321 AQFHLSYGWDSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYYPMLDTFHLWG 400 (553)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~~~g~~~ 400 (553)
..-.. +..+.|.+.+..++.+.+.+.. .+.........|| +.||+++|+.-....+++.+...+...+... ....
T Consensus 87 ~~~~i--~~~~~~~~~~~~~l~~~s~~~~-~ta~lvt~~~NFP-~~RG~vvgilk~~~GLSaai~t~i~~~~f~~-~~~~ 161 (250)
T PF06813_consen 87 VSGRI--PSLPVWLMCLFLFLGGNSSCWF-NTASLVTCVRNFP-RSRGTVVGILKGFFGLSAAIFTQIYSAFFGD-DPSS 161 (250)
T ss_pred HhCcc--CccchHHHHHHHHHHcccHHHh-hhHHHHHHHHhCc-cccCceehhhhHHHHhHHHHHHHHHHHHcCC-ChHH
Confidence 32110 0123344444444433332222 1222244457787 5799999999999999998888777766654 2233
Q ss_pred hHHHHHHHHHHHHhhheEEc
Q psy15864 401 TLYFYAAISVVGTLYMYFVM 420 (553)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~ 420 (553)
.+...+..+.++.++..+++
T Consensus 162 fll~la~~~~~v~l~~~~~v 181 (250)
T PF06813_consen 162 FLLFLAVLPAVVCLVAMFFV 181 (250)
T ss_pred HHHHHHHHHHHHHHHHhhhe
Confidence 34444444444444443333
No 217
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=98.53 E-value=1.1e-06 Score=85.40 Aligned_cols=136 Identities=10% Similarity=-0.156 Sum_probs=105.3
Q ss_pred hHHHHhhHHHHHHhhCCCC-ChHHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHHHHHHHHHhhcccCCC
Q psy15864 252 MTTLQTYAVGIFESIHAPL-DPYFATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAACFIVVAVYAQFHLSYGWD 330 (553)
Q Consensus 252 ~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~ 330 (553)
........|.+.+....+. +..+.......+..++++.++++.+|+|+|..+++++.+++++++++.-... ..
T Consensus 29 ~~l~diLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~avg~~lF~pAa~------~~ 102 (422)
T COG0738 29 TCLNDILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAVGAALFWPAAS------SK 102 (422)
T ss_pred hhcchhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhhh------hh
Confidence 3344455666666666653 4457778888999999999999999999999999999999999988864332 33
Q ss_pred CChhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhHHHHh
Q psy15864 331 SPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYYPMLD 394 (553)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~ 394 (553)
+...++++.++.+.+.+..-.. ...|++.+.|++..+.-+.+.+.+..+|++++|+++++++.
T Consensus 103 ~y~~FL~~lFila~Gi~~Leta-aNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lil 165 (422)
T COG0738 103 SYGFFLVALFILASGIGLLETA-ANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLIL 165 (422)
T ss_pred hHHHHHHHHHHHHhhhHHHHhc-cchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHH
Confidence 4555666667777766554444 45899999998777778899999999999999999998876
No 218
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=98.52 E-value=1.4e-06 Score=88.83 Aligned_cols=177 Identities=14% Similarity=0.070 Sum_probs=103.5
Q ss_pred HHHHHHHHHhhhhhHHHHhhHHHHHHhhCCCCChH-HH--HHHHHHHHHHHHHHH-hhhhcccCCcceeecchhHHHH-H
Q psy15864 239 IVTSLFFIGQFGGMTTLQTYAVGIFESIHAPLDPY-FA--TLLLGVAELGGALLC-VVLIHYTGKRPLALISTGGSAA-C 313 (553)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~--~~~~~i~~~~g~~~~-g~l~dr~Grr~~l~~~~~~~~i-~ 313 (553)
..++..++.+...+.....++|.++++.|.+.+.. .. ..+..+..++.+++. ++..||+|||+..++.+.+... +
T Consensus 4 ~~~~~ly~~~g~~~~~~~p~lp~~l~~~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~i~~~~~~~~~~ 83 (390)
T TIGR02718 4 ITLGLLYLSQGIPIGLAMDALPTLLREDGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRSWVLPMQCLVSAC 83 (390)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhHHHHHHHHHHHH
Confidence 34455566777777788889999999888765443 22 233456666666666 5578999999886555433222 2
Q ss_pred HHHHHHHHHhhcccCCCC-ChhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhHHH
Q psy15864 314 FIVVAVYAQFHLSYGWDS-PLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYYPM 392 (553)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~ 392 (553)
...+..... ... ....+...++..++ .....+....+..|..+.+.++.+.+.......+|..+++.+.+++
T Consensus 84 ~~~~~~~~~------~~~~~~~~~~~~~~~~~~-~a~~d~~~d~~~~~~~~~~~~~~~~~~~~~g~~lG~~~g~~~~~~l 156 (390)
T TIGR02718 84 LASLALVGP------DVAGAGWAVGLLACASLA-SATQDIATDGMAAEHFNGRTLAKGNAVQIAGVMIGFFGGGAGTLVL 156 (390)
T ss_pred HHHHHcCCc------chhhHHHHHHHHHHHHHH-HHHHHHHHHHHHHHhCCHhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 222221100 111 11222222222222 2222233334556667777767766666666678888888878888
Q ss_pred HhhccchhhHHHHHHHHHHHHhhheEEccc
Q psy15864 393 LDTFHLWGTLYFYAAISVVGTLYMYFVMPE 422 (553)
Q Consensus 393 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~pe 422 (553)
.+..+|...+++.+++.++..+..+++.|+
T Consensus 157 ~~~~gw~~~f~~~a~l~~~~~~~~~~~~~~ 186 (390)
T TIGR02718 157 FGKFGQRPAFLLVACVPLASLVCVLWLKDR 186 (390)
T ss_pred HHHhCHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 888888778877777766655555444444
No 219
>KOG2816|consensus
Probab=98.52 E-value=4.8e-07 Score=92.43 Aligned_cols=253 Identities=17% Similarity=0.115 Sum_probs=152.0
Q ss_pred ccchhhhhhhhhccCcccccchhchhhhhHHHHHHHHHhhcccc----chHHHHHHHHHHHHHHHHH-hccccCCceeee
Q psy15864 98 APLVLVLTYVAEITQPHLRGMLSATASMTTIFGTVSQLFLGSFL----HWRSAAILNLLFPILALCA-LYFIPESPHWLI 172 (553)
Q Consensus 98 a~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~lG~~l~~~l~~~l----gWr~~f~i~~i~~li~~i~-~~~lpEsp~~l~ 172 (553)
+....+.+|++|....++|....++....+..+..++|.+++.+ |.-.+|.+..+..++.++. ++++||+-.-
T Consensus 128 ~~~s~~~a~vadis~~~~R~~~~gll~~~~~~~~~~~p~~~~~~~~~~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~-- 205 (463)
T KOG2816|consen 128 AIFSVGFAYVADISSEEERSSSIGLLSGTFGAGLVIGPALGGYLVKFLGIALVFLIAAASGILSLLYMLLFLPESLQE-- 205 (463)
T ss_pred hhhhhhhhheeeccchhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhccccccCc--
Confidence 34556779999999999999999999998888888888887766 7778888888888877554 4558987421
Q ss_pred ecCChHHHHHHHHHHcCCCCCcchHHHHHHHHHHHHHHHHHhcCCCCCCChhhhhhhhhcchhHHHHHHHHHHHHhh---
Q psy15864 173 SQGRMQEASASLCWLRGWVTPDKVQTELSQITKAIEESELKRLGKDGQRRPNYRMYMRRTFLLPYAIVTSLFFIGQF--- 249 (553)
Q Consensus 173 ~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 249 (553)
+.+.+ ....... ......... ...+.........+..+.++....+...
T Consensus 206 -~~~~~---~~~~~~~---~~~~~~~~~---------------------~~~~~~~~~~~~~r~~l~l~l~~~~~~~~~~ 257 (463)
T KOG2816|consen 206 -KERSD---ATLRELT---PGSLDSSHV---------------------ADAFQSLTKVGPDRLLLLLLLVAFLSSLPEA 257 (463)
T ss_pred -ccccc---ccccccC---CCcccchhh---------------------hhhhhhhcccCCCccchHHHHHHHHHHHHHh
Confidence 00000 0000000 000000000 0111111111111111111211111111
Q ss_pred hhhH-HHHhhHHHHHHhhCCCCCh-HHHHHHHHHHHHHHHHHHh-hhhcccCCcceeecchhHHHHHHHHHHHHHHhhcc
Q psy15864 250 GGMT-TLQTYAVGIFESIHAPLDP-YFATLLLGVAELGGALLCV-VLIHYTGKRPLALISTGGSAACFIVVAVYAQFHLS 326 (553)
Q Consensus 250 ~~~~-~~~~~~~~~~~~~g~~~~~-~~~~~~~~i~~~~g~~~~g-~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~ 326 (553)
.+.. ...+|+.. ..+.+... ....+..++...++.++.. .+...+|-|+++..|+....+..++.++
T Consensus 258 ~~~~~~~~~yl~~---~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~~i~lGl~~~~~~~~~~af------- 327 (463)
T KOG2816|consen 258 GGASDVLLLYLKA---KFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSILGEKRLISLGLLSEFLQLLLFAF------- 327 (463)
T ss_pred cCceeEEEEEEee---ecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhHHHHHHHHHHHHHHH-------
Confidence 1111 11122111 23443333 3445555666666666665 6778888888888888888888888887
Q ss_pred cCCCCChhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhHHHHh
Q psy15864 327 YGWDSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYYPMLD 394 (553)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~ 394 (553)
.+..|+++....+..+.. ...+...++++-+..++.+|.+.++...+..+.++++|.+.+.+..
T Consensus 328 --~~~~w~~~~~~v~~~~~~--~~~pa~~s~~s~~v~~~e~g~v~~~is~i~~l~~~~~~~~~~~i~~ 391 (463)
T KOG2816|consen 328 --ATETWMMFAAGVVVALAG--IVFPAIRAFASILVSPEEQGKVFGIISGIEGLSGVVSPALYGNIFA 391 (463)
T ss_pred --hccchhhhHHHHHHHhhc--chhHHHHhHHHhhcccccccchhhHHHHHHHHhhhhhHHHHHHHHH
Confidence 667777777666655533 3334445777888899999999999999999999999999887754
No 220
>KOG2325|consensus
Probab=98.51 E-value=2.8e-07 Score=93.03 Aligned_cols=83 Identities=14% Similarity=0.167 Sum_probs=61.5
Q ss_pred ccccccccccccc-chhhhhhhhhccCcccccchhchhhhhHHHHHHHHHhhcccc-----------------chHHHHH
Q psy15864 87 EEKGTFLYKMAAP-LVLVLTYVAEITQPHLRGMLSATASMTTIFGTVSQLFLGSFL-----------------HWRSAAI 148 (553)
Q Consensus 87 ~~~gr~~~G~ga~-~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~lG~~l~~~l~~~l-----------------gWr~~f~ 148 (553)
---+|++.|+|.+ ..+.=+|+++....+.|.++++....+..+|.++||.+...+ -+-.+-|
T Consensus 133 mL~~R~l~Gvg~~n~a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~~Lg~~G~~i~~~~~~n~YTap~w 212 (488)
T KOG2325|consen 133 MLVARILTGVGVGNFAVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAFTPLGEKGFMILPGLIFNMYTAPAW 212 (488)
T ss_pred HHHHHHHcCcCcccHHHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHHhhhcCCceEEcCcceEEecchHHH
Confidence 3468999999965 455669999999999999999999988888888888776543 1345567
Q ss_pred HHHHHHHHHHHHh-ccccCCce
Q psy15864 149 LNLLFPILALCAL-YFIPESPH 169 (553)
Q Consensus 149 i~~i~~li~~i~~-~~lpEsp~ 169 (553)
+++++.++.+++. +++.|.++
T Consensus 213 ~m~i~~i~~~v~i~~~f~E~~~ 234 (488)
T KOG2325|consen 213 LMAILWIIYIVIILFFFKEVYR 234 (488)
T ss_pred HHHHHHHHHHHHHHhheeeccc
Confidence 7777777765444 44777654
No 221
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=98.51 E-value=3.8e-07 Score=91.16 Aligned_cols=141 Identities=13% Similarity=-0.005 Sum_probs=101.5
Q ss_pred CCCChH-HHHHHHHHHHHHHHHHHhhhhcc-cCCcceeecchhHHHHHHHHHHHHHHhhcccCCCCChhHHHHHHHHHHH
Q psy15864 268 APLDPY-FATLLLGVAELGGALLCVVLIHY-TGKRPLALISTGGSAACFIVVAVYAQFHLSYGWDSPLVPTVFLVLAAFL 345 (553)
Q Consensus 268 ~~~~~~-~~~~~~~i~~~~g~~~~g~l~dr-~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (553)
++.+.. .....++.-.-+..+++||++|| +|+|++++++.++++++-++++... ......+++...+.+++
T Consensus 58 ~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI~lGail~~iGh~~L~~~~-------~~~~~gl~i~L~~I~iG 130 (498)
T COG3104 58 FDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTIVLGAILMAIGHLVLAISS-------VSGPGGLYIGLALIIVG 130 (498)
T ss_pred cChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhccc-------cccccHHHHHHHHHHhc
Confidence 544333 33334444455677889999999 5999999999999999999988721 03455667777776766
Q ss_pred Hhhhhccccceeeccccccc--hhhhhhhHHHHHHHHHHHHHHHHhHHHHhhccchhhHHHHHHHHHHHHhhh
Q psy15864 346 THICIRLLPWMLIGEVFPNN--IRATASGASGSSSYIFAFAVNKLYYPMLDTFHLWGTLYFYAAISVVGTLYM 416 (553)
Q Consensus 346 ~~~~~~~~~~~~~~e~~p~~--~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 416 (553)
.|..=..+ ...++|++|+. .|-.+.++.+...++|++++|.+.+++.+..+|...|.+.++-..+.++..
T Consensus 131 ~Gl~K~Ni-S~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~~~~~~~~g~~~gF~~aavGm~~gl~~f 202 (498)
T COG3104 131 TGLFKPNI-SSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPIITGLLAINYGWHVGFGLAAVGMIIGLVIF 202 (498)
T ss_pred cccccccH-HHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHH
Confidence 65544444 48889999864 366677888888999999999999999999997766666555554444443
No 222
>KOG2816|consensus
Probab=98.48 E-value=1.3e-06 Score=89.42 Aligned_cols=138 Identities=15% Similarity=0.115 Sum_probs=108.7
Q ss_pred HHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHHHHHHHHHhhcccCCCCChhHHHHHHHHHHHHhhhhccccceee
Q psy15864 279 LGVAELGGALLCVVLIHYTGKRPLALISTGGSAACFIVVAVYAQFHLSYGWDSPLVPTVFLVLAAFLTHICIRLLPWMLI 358 (553)
Q Consensus 279 ~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (553)
.++..++.+++.|.++|++|||..+.+..+...+..+.+.+. . |+.++..-+.|.. .+.....++|+
T Consensus 71 ~~~~~~i~s~~iG~lSD~~grk~~L~~~~~~~~l~~~~~~~~---------~--~~~~~~~~l~g~~--~~~~s~~~a~v 137 (463)
T KOG2816|consen 71 AGLLTLISSPLIGALSDRYGRKVVLLLPLFGTILPALCLLFQ---------G--YWFFLLLGLSGGF--SAIFSVGFAYV 137 (463)
T ss_pred hHHHHHHHHhhhHHhhhhhhhhhhHHHHHHHHHHhHHHHHHH---------H--HHHhhhcccccch--hhhhhhhhhhe
Confidence 467788899999999999999999988888877777766652 1 2222222222222 22234446999
Q ss_pred ccccccchhhhhhhHHHHHHHHHHHHHHHHhHHHHhhccchhhHHHHHHHHHHHHhhheEEcccCCCCChH
Q psy15864 359 GEVFPNNIRATASGASGSSSYIFAFAVNKLYYPMLDTFHLWGTLYFYAAISVVGTLYMYFVMPETEGRTLR 429 (553)
Q Consensus 359 ~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~pet~~~~~~ 429 (553)
+++...+.|....|+.......+..++|.+.+.+....+....+.+.++..++..+..++++||+...+.+
T Consensus 138 adis~~~~R~~~~gll~~~~~~~~~~~p~~~~~~~~~~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~~~~ 208 (463)
T KOG2816|consen 138 ADISSEEERSSSIGLLSGTFGAGLVIGPALGGYLVKFLGIALVFLIAAASGILSLLYMLLFLPESLQEKER 208 (463)
T ss_pred eeccchhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhccccccCcccc
Confidence 99999999999999999999999999999999999988888888888888899999999999998655443
No 223
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=98.42 E-value=1.9e-07 Score=95.88 Aligned_cols=290 Identities=15% Similarity=0.169 Sum_probs=141.1
Q ss_pred hhhhhccC--cccccchhchhhhhHHHHHHHHHhhcccc----chHHHHHHHHHHHHHHHHHhcc-ccCCceeeeecCCh
Q psy15864 105 TYVAEITQ--PHLRGMLSATASMTTIFGTVSQLFLGSFL----HWRSAAILNLLFPILALCALYF-IPESPHWLISQGRM 177 (553)
Q Consensus 105 ~~i~e~~p--~~~Rg~~~~~~~~~~~lG~~l~~~l~~~l----gWr~~f~i~~i~~li~~i~~~~-lpEsp~~l~~~~~~ 177 (553)
+++.|... ++.||...+.......+|.+++..+++.+ ++|+.|.+.+++.++.++..++ .+|.+.. ..
T Consensus 109 a~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~~~~f~i~~~~~~l~~~~~~~~~~e~~~~--~~--- 183 (433)
T PF03092_consen 109 ALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGPQGVFLISAALPLLMLIVALFLLEERKVR--PA--- 183 (433)
T ss_pred HHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCeEEehHHHHHHHHHHHHHHHhhhhcccc--cc---
Confidence 66677663 33478888888888888999888877765 8999999988887777655555 4442110 00
Q ss_pred HHHHHHHHHHcCCCCCcchHHHHHHHHHHHHHHHHHhcCCCCCCChhhhhhhhhcchhHHHHHHHHHHHHhhhhhHHHHh
Q psy15864 178 QEASASLCWLRGWVTPDKVQTELSQITKAIEESELKRLGKDGQRRPNYRMYMRRTFLLPYAIVTSLFFIGQFGGMTTLQT 257 (553)
Q Consensus 178 ~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (553)
++... .. .. ..........+... ..++.+..+..+...+...++..+..........+
T Consensus 184 ~~~~~----~~---~~-~~~~~~~~~~~~~~--------------~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~a~~fy 241 (433)
T PF03092_consen 184 DEVFS----FG---KE-EVPCLFGSFREQLS--------------ELWRALQQRAIWQPILFFIFFFNLPPSISSASSFY 241 (433)
T ss_pred chhhc----cc---cc-ccchhhHHHHHHHH--------------HHHHHHhhhHHHHHHHHHHHHHHhccCCCCccEEE
Confidence 00000 00 00 00000000000000 11111222222222221111111111111010111
Q ss_pred hHHHHHHhhCCCCChH---HHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHHHHHHHHH-hhcccCCCCCh
Q psy15864 258 YAVGIFESIHAPLDPY---FATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAACFIVVAVYAQ-FHLSYGWDSPL 333 (553)
Q Consensus 258 ~~~~~~~~~g~~~~~~---~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~-~~~~~~~~~~~ 333 (553)
+...... |...+.. ....+..++.++|..+.....-+..-|+++.++.++.++..+.-..+.. +....+....+
T Consensus 242 ~~~~~~~--gp~fs~~f~~~~~~vg~~~~l~g~~~y~~~~~~~~~R~~~~~t~~~~~~~~l~~~~lv~~~n~~~Gi~d~~ 319 (433)
T PF03092_consen 242 FQTDALG--GPHFSPSFYGTLSIVGSIASLLGILLYRKYFSNWSWRRIFVVTTLVSVLASLFDLLLVTRWNLDLGIPDQW 319 (433)
T ss_pred EEecccc--ccccCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhcccEEEEEEEeeeeCcCCeE
Confidence 2111111 2222222 2233445556666666555444445455554444433333222111100 00011112234
Q ss_pred hHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhHHHHhhccc-------hhhHHHHH
Q psy15864 334 VPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYYPMLDTFHL-------WGTLYFYA 406 (553)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~~~g~-------~~~~~~~~ 406 (553)
..+....+..+.....+.|.. ..+++++|+..-|+.+++...+.+++..++..+...+.+..+. -+..++.+
T Consensus 320 f~lgd~~l~~~~~~i~~mP~l-vl~a~lcP~G~Egt~yall~s~~Nlg~~~s~~lg~~l~~~~~vt~~~f~~l~~lili~ 398 (433)
T PF03092_consen 320 FALGDTILEEVIGMIAFMPSL-VLAARLCPKGSEGTVYALLASFSNLGSSVSSTLGAFLMELFGVTRDDFSNLWLLILIC 398 (433)
T ss_pred EEEEhHHHHHHHHHHHHHHHH-HHHHHHCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccchHHHHHHH
Confidence 444455566666667777775 7889999999999999999999999999999888887765442 12223333
Q ss_pred HHHHHHHhhheEEcccCC
Q psy15864 407 AISVVGTLYMYFVMPETE 424 (553)
Q Consensus 407 ~~~~~~~~~~~~~~pet~ 424 (553)
.++.++.+....++|+.+
T Consensus 399 ~~~~ll~l~ll~lLp~~~ 416 (433)
T PF03092_consen 399 SVIQLLPLPLLFLLPPQK 416 (433)
T ss_pred HHHHHHHHHHHHHcCCCc
Confidence 333344444445666643
No 224
>KOG3762|consensus
Probab=98.39 E-value=6e-07 Score=89.89 Aligned_cols=132 Identities=14% Similarity=0.097 Sum_probs=106.5
Q ss_pred HHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHHHHHHHHHhhcccCCCCChhHHHHHHHHHHHHhhhhccc
Q psy15864 274 FATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAACFIVVAVYAQFHLSYGWDSPLVPTVFLVLAAFLTHICIRLL 353 (553)
Q Consensus 274 ~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (553)
.......++.++.-++.+++..++|+-+++.+++.+.++=.+.+.. ..+.|+.+.+-++-++..+..|.++
T Consensus 410 v~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~S~---------L~n~W~vLPieilqgit~aliWaa~ 480 (618)
T KOG3762|consen 410 VVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGRFLYYSY---------LQNPWMVLPIEILQGITHALIWAAI 480 (618)
T ss_pred ehhhhhccchHHHHHHHHHHHHHhcccceeeehhhHHHHHHHHHHH---------hcCchheeeHHHHHHHHHHHHHHHH
Confidence 3444556778888899999999999999999998888777777666 6788999999999999999999888
Q ss_pred cceeeccccccchhhhhhhHHHHH-HHHHHHHHHHHhHHHHhhccchhhHHHHHHHHHHHHhh
Q psy15864 354 PWMLIGEVFPNNIRATASGASGSS-SYIFAFAVNKLYYPMLDTFHLWGTLYFYAAISVVGTLY 415 (553)
Q Consensus 354 ~~~~~~e~~p~~~Rg~~~~~~~~~-~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 415 (553)
. +|++...||+.|+++.++.... ..+|-.++++++|.+...++....+.++++.+++.+++
T Consensus 481 ~-sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~fg~~ttf~~~giAcl~~l~~ 542 (618)
T KOG3762|consen 481 I-SYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERFGARTTFRIFGIACLVTLAL 542 (618)
T ss_pred H-HHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhheeehhHHHHHHHHHHHHHHHHH
Confidence 6 9999999999999999988766 44666777778888888877666666666655555443
No 225
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=98.38 E-value=7.8e-06 Score=78.96 Aligned_cols=156 Identities=12% Similarity=0.029 Sum_probs=99.6
Q ss_pred HHHHhhCCCCCh-HHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHHHHHHHHHhhcccCCCCChhHHHHH
Q psy15864 261 GIFESIHAPLDP-YFATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAACFIVVAVYAQFHLSYGWDSPLVPTVFL 339 (553)
Q Consensus 261 ~~~~~~g~~~~~-~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (553)
.+++.+|++... ........+..++...+.|.++||+|||+..++.+++..++++... ..+.+.+++++
T Consensus 59 ~LY~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl~k~----------~~~~~~L~~GR 128 (354)
T PF05631_consen 59 ALYESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSLSCLTKH----------SSNYPVLLLGR 128 (354)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHh----------ccccHHHHHHH
Confidence 445667876544 3455555566777778889999999999998888888888876443 56788899999
Q ss_pred HHHHHHHhhhhccccceeeccc----cccchhhhhhhHHHHH-HHHHHHHHHHHhHHHHhhccc--hhhHHHHHHHHHHH
Q psy15864 340 VLAAFLTHICIRLLPWMLIGEV----FPNNIRATASGASGSS-SYIFAFAVNKLYYPMLDTFHL--WGTLYFYAAISVVG 412 (553)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~e~----~p~~~Rg~~~~~~~~~-~~~~~~i~~~~~~~~~~~~g~--~~~~~~~~~~~~~~ 412 (553)
++.|++....+.+.-.=++.|. +|.+..+...+...+. ..+.+++++.+.-.+.+..+. ..++.....+.++.
T Consensus 129 vlgGiaTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~~ 208 (354)
T PF05631_consen 129 VLGGIATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVLLAVA 208 (354)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHHHH
Confidence 9999887766654321233343 4444444444444422 334445555555555555443 44566666666666
Q ss_pred HhhheEEcccCCCC
Q psy15864 413 TLYMYFVMPETEGR 426 (553)
Q Consensus 413 ~~~~~~~~pet~~~ 426 (553)
.+++....+|..+.
T Consensus 209 ~~~I~~~W~ENyg~ 222 (354)
T PF05631_consen 209 AVLILKTWPENYGD 222 (354)
T ss_pred HHHHHhcccccCCC
Confidence 66666677787654
No 226
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=98.35 E-value=3.7e-06 Score=86.37 Aligned_cols=157 Identities=13% Similarity=0.022 Sum_probs=84.4
Q ss_pred hhHHHHhhHHHHH-HhhCCCC-ChHHHHHHHHHHHHHHHHHHhhhhcccCC-cceeecchhHHHHHHHHHHHHHHhhccc
Q psy15864 251 GMTTLQTYAVGIF-ESIHAPL-DPYFATLLLGVAELGGALLCVVLIHYTGK-RPLALISTGGSAACFIVVAVYAQFHLSY 327 (553)
Q Consensus 251 ~~~~~~~~~~~~~-~~~g~~~-~~~~~~~~~~i~~~~g~~~~g~l~dr~Gr-r~~l~~~~~~~~i~~~~~~~~~~~~~~~ 327 (553)
.+.....+++.++ +..|.+. +..+...+..++.++++++.|+++||+|| |+++.++.++..++..+..+
T Consensus 17 ~~~~~~~~l~~~l~~~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~~~~~~~~~~-------- 88 (418)
T TIGR00889 17 IWGSWLVTLGSYMSKTLHFSGAEIGWVYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFAGALLLFFAAQ-------- 88 (418)
T ss_pred HHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHH--------
Confidence 3333434444444 4456654 34577788899999999999999999965 66666665555454444433
Q ss_pred CCCCChhHHHHHHHHHHHHhhhhccc---cceeec----cccccchhhhhhhHHHHHHHHHHHHHHHHhHHHHhhccchh
Q psy15864 328 GWDSPLVPTVFLVLAAFLTHICIRLL---PWMLIG----EVFPNNIRATASGASGSSSYIFAFAVNKLYYPMLDTFHLWG 400 (553)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~----e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~~~g~~~ 400 (553)
.++.+.+++.+++.+++.+...... ...+.. |+.....|.+..| .+|.+++|.+.+.+ .....+.
T Consensus 89 -~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~r~~G------~lG~~ig~~l~g~l-~~~~~~~ 160 (418)
T TIGR00889 89 -VTTPAGMFPVLLANSLAYMPTIALTNSISYANLPQAGLDVVTDFPPIRVMG------TIGFIAAMWAVSLL-DIELSNI 160 (418)
T ss_pred -hcCHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhhcCCCchhcCCCeeeeh------hHHHHHHHHHHHHh-cccchhH
Confidence 3445555555555555432222111 112211 2222222333333 35667777777655 2222234
Q ss_pred hHHHHHHHHHHHHhhheEEcccCC
Q psy15864 401 TLYFYAAISVVGTLYMYFVMPETE 424 (553)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~pet~ 424 (553)
++++.+++.++..++ .+++||+.
T Consensus 161 ~f~~~~~~~~~~~~~-~~~~~e~~ 183 (418)
T TIGR00889 161 QLYITAGSSALLGVF-ALTLPDIP 183 (418)
T ss_pred HHHHHHHHHHHHHHH-HhcCCCCC
Confidence 455555555544443 45778763
No 227
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.30 E-value=9e-06 Score=85.01 Aligned_cols=166 Identities=12% Similarity=0.065 Sum_probs=90.5
Q ss_pred hHHHHhhHHHHHHh-hCCCCC-hHHHHHHHHHHHHHHHHHHhhhhc----ccCCc-ceeecchhHHHHHHHHHHHHHHhh
Q psy15864 252 MTTLQTYAVGIFES-IHAPLD-PYFATLLLGVAELGGALLCVVLIH----YTGKR-PLALISTGGSAACFIVVAVYAQFH 324 (553)
Q Consensus 252 ~~~~~~~~~~~~~~-~g~~~~-~~~~~~~~~i~~~~g~~~~g~l~d----r~Grr-~~l~~~~~~~~i~~~~~~~~~~~~ 324 (553)
...+..|++.++.+ .|.+.. .....++.-+..++..++.|+++| |+||| +.++++.++++++.+++...+.
T Consensus 22 ~~~~~~~l~~yyt~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~~~llf~~p~-- 99 (473)
T PRK10429 22 IGIVYMYLMYYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANSVVLFLLFSAHL-- 99 (473)
T ss_pred HHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHHHHHHHHHcCCC--
Confidence 34444555555544 465532 235555666777888899999999 56985 4555566665555444432110
Q ss_pred cccCCCC--ChhHHHHHHHHHHHHhhhhccccceeecccc-ccchhhhhhhHHHHHHHHHHHHHHHHhHHHHhhc-----
Q psy15864 325 LSYGWDS--PLVPTVFLVLAAFLTHICIRLLPWMLIGEVF-PNNIRATASGASGSSSYIFAFAVNKLYYPMLDTF----- 396 (553)
Q Consensus 325 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~~~----- 396 (553)
.... .+.+++..+++..++.....|. .++..|+. +++.|....+.-..+..+++.+++.+...++...
T Consensus 100 ---~~~~~~~~~~~~~~~l~~~~~t~~~ip~-~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~~~~~~~~~g~~~~ 175 (473)
T PRK10429 100 ---FEGTAQYVFVCVTYILWGMTYTIMDIPF-WSLVPTLTLDKREREQLVPYPRFFASLAGFVTAGFTLPFVNYVGGGDR 175 (473)
T ss_pred ---CCccHHHHHHHHHHHHHHHHHHHHcchH-HhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCch
Confidence 0111 1122223333344443343333 37778988 5889999888766666777666655554443222
Q ss_pred --cchhhHHHHHHHHHHHHhhheEEcccC
Q psy15864 397 --HLWGTLYFYAAISVVGTLYMYFVMPET 423 (553)
Q Consensus 397 --g~~~~~~~~~~~~~~~~~~~~~~~pet 423 (553)
++.....+++++.++..++.++..+|.
T Consensus 176 ~~g~~~~~~i~~~~~~~~~~~~~~~~~e~ 204 (473)
T PRK10429 176 GFGFQMFTLVLIAFFIVSTIITLRNVHEV 204 (473)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHcCceec
Confidence 222333444444455555555556664
No 228
>PRK09669 putative symporter YagG; Provisional
Probab=98.30 E-value=6.1e-06 Score=85.63 Aligned_cols=166 Identities=13% Similarity=0.082 Sum_probs=92.3
Q ss_pred HHHhhHHHHHH-hhCCCCC-hHHHHHHHHHHHHHHHHHHhhhhcc----cCCcce-eecchhHHHHHHHHHHHHHHhhcc
Q psy15864 254 TLQTYAVGIFE-SIHAPLD-PYFATLLLGVAELGGALLCVVLIHY----TGKRPL-ALISTGGSAACFIVVAVYAQFHLS 326 (553)
Q Consensus 254 ~~~~~~~~~~~-~~g~~~~-~~~~~~~~~i~~~~g~~~~g~l~dr----~Grr~~-l~~~~~~~~i~~~~~~~~~~~~~~ 326 (553)
.+..|++.++. ..|.+.. .....++.-+...+..++.|+++|| +|||+. ++++.++.+++.+++...+..
T Consensus 27 ~~~~~l~~~~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f~~p~~--- 103 (444)
T PRK09669 27 TVMLFLAYFYTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTFYTPDF--- 103 (444)
T ss_pred HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHHhCCCC---
Confidence 33444444443 4565532 2355556667788889999999999 677554 445656665655444332100
Q ss_pred cCCCCChhHHHHHHHHHHHHhhhhccccceeecccc-ccchhhhhhhHHHHHHHHHHHHHHHHhHHHHhhc-------cc
Q psy15864 327 YGWDSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVF-PNNIRATASGASGSSSYIFAFAVNKLYYPMLDTF-------HL 398 (553)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~~~-------g~ 398 (553)
......+..++..++++.++.....|. .++.+|+. +++.|+...+....+..+|+.+++.+...+.... +|
T Consensus 104 ~~~~~~~~~~~~~~l~~~~~t~~~ip~-~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~~~~~~~~~g~ 182 (444)
T PRK09669 104 GATGKIIYACVTYILLSLVYTAINVPY-CAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIALPLVDILGKGDEQKGY 182 (444)
T ss_pred CcchHHHHHHHHHHHHHHHHHhhcchH-HHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhH
Confidence 001112233333334444444333333 36778887 5678888888877777787777776555544332 33
Q ss_pred hhhHHHHHHHHHHHHhhheEEcccC
Q psy15864 399 WGTLYFYAAISVVGTLYMYFVMPET 423 (553)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~~~~pet 423 (553)
...+.+++++.+++.++.++..+|.
T Consensus 183 ~~~~~i~~ii~~v~~~~~~~~~~e~ 207 (444)
T PRK09669 183 FYAMMVMGLLGVVLFFCCFFMTKER 207 (444)
T ss_pred HHHHHHHHHHHHHHHHHHhCCeEEe
Confidence 3344455555555555555555553
No 229
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.23 E-value=7.5e-06 Score=85.23 Aligned_cols=172 Identities=14% Similarity=0.000 Sum_probs=97.2
Q ss_pred HHHHHHHHhhhhhHHHHhhHHHHHH-hhCCCCChH-HHHHHHHHHHHHHHHHHhhhhcccC-----CcceeecchhHHHH
Q psy15864 240 VTSLFFIGQFGGMTTLQTYAVGIFE-SIHAPLDPY-FATLLLGVAELGGALLCVVLIHYTG-----KRPLALISTGGSAA 312 (553)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~-~~~~~~~i~~~~g~~~~g~l~dr~G-----rr~~l~~~~~~~~i 312 (553)
++...++.+... .......+.++. ..|.+.... ....+..+...+-.+ .|+++|+++ ||+.++++.++..
T Consensus 30 ~~~~~y~~qGl~-~l~~~~~~~~l~~~lg~s~~~i~~~~sl~~lpw~~K~l-~g~l~D~~~i~G~rRr~~l~~~~~l~~- 106 (468)
T TIGR00788 30 IGLQVLFVKGIA-GLMRLPLSPMLTDDLGLDGARYQRLVGLSSLGWALKPF-AGVMSDTFPLFGYTKRWYLVLSGLLGS- 106 (468)
T ss_pred HHHHHHHHhhHH-HHhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHhcCCCCccchHHHHHHHHHHH-
Confidence 333344555544 444444444444 467765443 445555666666545 999999997 5666665554432
Q ss_pred HHHHHHHHHHhhcccCCCCChhHH-HHHHHHHHHHhhhhccccceeeccccccchhhhhh---hHHHHHHHHHHHHHHHH
Q psy15864 313 CFIVVAVYAQFHLSYGWDSPLVPT-VFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATAS---GASGSSSYIFAFAVNKL 388 (553)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~---~~~~~~~~~~~~i~~~~ 388 (553)
.+.+..+.. ..+..... +..++.+++.+..- ...-.+..|..+ +.++.+. ++......+|..+++.+
T Consensus 107 -~~~~~~l~~------~~~~~~~~~~~~~l~~~~~a~~d-v~~da~~~e~~~-~~~~~~~~~~s~~~~~~~~G~~vg~~l 177 (468)
T TIGR00788 107 -AILYGLLPG------KVSSAKVAAAFIFLAALAKALYD-VLVDSLYSERIR-ESPSAGPSLVSWMWGASATGGLISSLL 177 (468)
T ss_pred -HHHHHhccc------ccchHHHHHHHHHHHHHHHHHHH-HhHHHHHhhhhh-cCCCcCCCeeeHHHHHHHHHHHHHHHH
Confidence 111111110 12222222 24445555444443 334578889887 4444433 33334445789999999
Q ss_pred hHHHHhhccchhhHHHHHHHHHHHHhhheEEcccCC
Q psy15864 389 YYPMLDTFHLWGTLYFYAAISVVGTLYMYFVMPETE 424 (553)
Q Consensus 389 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~pet~ 424 (553)
.+.+.+..+|...+++.+++.++. ++.++++||.+
T Consensus 178 ~G~l~~~~~~~~~f~~~a~l~ll~-~~~~~~~~E~~ 212 (468)
T TIGR00788 178 GGPLLDKTLTRILFLITAALLLLQ-LFVSNLSKERR 212 (468)
T ss_pred HHHHHHhcCcchHHHHHHHHHHHH-HHHHHhccccc
Confidence 999888888777777776666655 44456678864
No 230
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.21 E-value=8.4e-06 Score=84.15 Aligned_cols=162 Identities=17% Similarity=0.025 Sum_probs=97.2
Q ss_pred hHHHHH-HhhCCCCCh-HHHHHHHHHHHHHHHHHHhhhhc----ccCCccee-ecchhHHHHHHHHHHHH-HHhhcccCC
Q psy15864 258 YAVGIF-ESIHAPLDP-YFATLLLGVAELGGALLCVVLIH----YTGKRPLA-LISTGGSAACFIVVAVY-AQFHLSYGW 329 (553)
Q Consensus 258 ~~~~~~-~~~g~~~~~-~~~~~~~~i~~~~g~~~~g~l~d----r~Grr~~l-~~~~~~~~i~~~~~~~~-~~~~~~~~~ 329 (553)
|+..++ +..|.+... ....++.-+..++..++.|.++| |+|||+.. +++.++.+++.+++... +.-. ...
T Consensus 23 ~~~~f~~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~~p~~~--~~~ 100 (428)
T PF13347_consen 23 YLLYFYTDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSPPPAGL--SFT 100 (428)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhccccchh--hhh
Confidence 434443 334654322 23344445566666779999999 78976655 45666666666665542 1000 000
Q ss_pred CCChhHHHHHHHHHHHHhhhhccccceeeccccc-cchhhhhhhHHHHHHHHHHHHHHHHhHHHHhhc-------cchhh
Q psy15864 330 DSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFP-NNIRATASGASGSSSYIFAFAVNKLYYPMLDTF-------HLWGT 401 (553)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p-~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~~~-------g~~~~ 401 (553)
.......+..+++.++......+. .++.+|+.+ ++.|....+.-..+..+|+++.+.+.+.+.... ++...
T Consensus 101 ~~~~~~~~~~~l~~~~~t~~~i~~-~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~ 179 (428)
T PF13347_consen 101 AKLVWLFVFYILFDIAYTFVQIPY-NALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTSNGYRWM 179 (428)
T ss_pred hHHHHHHHHHHHHHHhhhhccCch-hhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccchHHHHH
Confidence 111223444444555554444444 378899987 578999988888888888876776766665433 34455
Q ss_pred HHHHHHHHHHHHhhheEEccc
Q psy15864 402 LYFYAAISVVGTLYMYFVMPE 422 (553)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~~pe 422 (553)
..+++++.++..++.++..+|
T Consensus 180 ~~v~~iv~~v~~~i~~~~~ke 200 (428)
T PF13347_consen 180 ALVLAIVGLVFFLITFFFVKE 200 (428)
T ss_pred HHHHHHHHHHHhhhhhheeee
Confidence 566677777777777788888
No 231
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=98.09 E-value=7.1e-06 Score=81.42 Aligned_cols=266 Identities=11% Similarity=0.077 Sum_probs=137.2
Q ss_pred hhhhhhhhccCcccccchhchhhhhHHHHHHHHHhhcccc------chHHHHHHHHHHHHHHHHHhccccCCceeeeecC
Q psy15864 102 LVLTYVAEITQPHLRGMLSATASMTTIFGTVSQLFLGSFL------HWRSAAILNLLFPILALCALYFIPESPHWLISQG 175 (553)
Q Consensus 102 ~~~~~i~e~~p~~~Rg~~~~~~~~~~~lG~~l~~~l~~~l------gWr~~f~i~~i~~li~~i~~~~lpEsp~~l~~~~ 175 (553)
+-++|+--..|+++--++.+...++..+|.+++.++|..+ +.+.++.+......+++++.+++|..++-+.-+.
T Consensus 113 ay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~~sy~~L~~isl~~~~~a~~~~~fLP~~~~S~~f~r 192 (412)
T PF01770_consen 113 AYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFGGVSYFQLNYISLASVSLALLIALFLPMPKRSLFFHR 192 (412)
T ss_pred HHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHcCCCCcccceec
Confidence 3347787788888888899888888888888888777765 6677777776666666777777877554221111
Q ss_pred ChHHHHHHHHHHcCCCCCcchHHHHHHHHHHHHHHHHHhcCCCCCCChhhhh---hhhhcchhHHHHHHHHHHHHhhhhh
Q psy15864 176 RMQEASASLCWLRGWVTPDKVQTELSQITKAIEESELKRLGKDGQRRPNYRM---YMRRTFLLPYAIVTSLFFIGQFGGM 252 (553)
Q Consensus 176 ~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (553)
+...... ..........+..+.. .................+.. -++..+..+.++...+++....+++
T Consensus 193 ~~~~~~~-~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~l~~l~~~~~~~y~~~~ll~WSlWWa~atcgy 263 (412)
T PF01770_consen 193 KPPAEQD-ANESESDKMNESPESS--------SSTEKSPSTESSSRKSVLRLLWKDFKSCYSNPRLLLWSLWWAFATCGY 263 (412)
T ss_pred cCccccc-cccccccccccccccc--------cccccCcccccchHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHhHH
Confidence 1100000 0000000000000000 00000000000000011111 1223334555677777888888888
Q ss_pred HHHHhhHHHHHHhhCCCC-Ch---HHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHHHHHHHHHhhcccC
Q psy15864 253 TTLQTYAVGIFESIHAPL-DP---YFATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAACFIVVAVYAQFHLSYG 328 (553)
Q Consensus 253 ~~~~~~~~~~~~~~g~~~-~~---~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~ 328 (553)
..+..|...+......+. .. +..-.+..+.+.++++..|++..++.+..-+.++..-...+.+++....
T Consensus 264 ~qv~nYvQ~LW~~v~~~~~~~vYNG~VeA~~tllgA~~al~~g~v~~~w~~~~~l~l~~~S~l~a~~L~lm~~------- 336 (412)
T PF01770_consen 264 YQVINYVQSLWDTVPPSDNESVYNGAVEAASTLLGAIAALLAGYVKVNWDRWGELALGVFSLLQAGLLFLMSF------- 336 (412)
T ss_pred HHHHHHHHHHHHhcCCCCCCcccchHHHHHHHHHHHHHHHHHhHhhcchHHHHHHHHHHHHHHHHHHHHHHHH-------
Confidence 888888888887662221 22 2344455566677778888886666554433333222222222222111
Q ss_pred CCCChhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHHH
Q psy15864 329 WDSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFA 384 (553)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i 384 (553)
..+.|..+++.+++...+.+...... .-++.....+.-|...|+..++..+...+
T Consensus 337 t~~Iwv~Y~~yIif~~~y~fliTiA~-~qIA~~l~~e~yaLVFGiNtf~Al~LQti 391 (412)
T PF01770_consen 337 TGNIWVCYAGYIIFRSLYMFLITIAS-FQIAKNLSEERYALVFGINTFVALVLQTI 391 (412)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhccccceeeeeeeHHHHHHHHHHh
Confidence 56778888777777776655443332 33333333444466666665555444433
No 232
>PRK11462 putative transporter; Provisional
Probab=98.03 E-value=8.2e-05 Score=77.37 Aligned_cols=167 Identities=10% Similarity=0.030 Sum_probs=94.0
Q ss_pred HHHHhhHHHHHH-hhCCCCC-hHHHHHHHHHHHHHHHHHHhhhhcc----cCCccee-ecchhHHHHHHHHHHHHHHhhc
Q psy15864 253 TTLQTYAVGIFE-SIHAPLD-PYFATLLLGVAELGGALLCVVLIHY----TGKRPLA-LISTGGSAACFIVVAVYAQFHL 325 (553)
Q Consensus 253 ~~~~~~~~~~~~-~~g~~~~-~~~~~~~~~i~~~~g~~~~g~l~dr----~Grr~~l-~~~~~~~~i~~~~~~~~~~~~~ 325 (553)
..+..|+..++. ..|.+.. .....++.-+.-.+.-++.|+++|| +|||+.. +++.++++++.+++...+.+
T Consensus 26 ~~~~~~l~~fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~llf~~p~~-- 103 (460)
T PRK11462 26 DNVMLYMMFFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYSTPDL-- 103 (460)
T ss_pred HHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHHHhCCCC--
Confidence 333444444443 3455422 2244445556677888999999997 6876554 45656666665544432110
Q ss_pred ccCCCCChhHHHHHHHHHHHHhhhhccccceeeccccc-cchhhhhhhHHHHHHHHHHHHHHHHhHHHHhhcc-------
Q psy15864 326 SYGWDSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFP-NNIRATASGASGSSSYIFAFAVNKLYYPMLDTFH------- 397 (553)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p-~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~~~g------- 397 (553)
........+++..+++..++.....|. .++.+|+.+ ++.|+...++-..++.+++.+++.+...+....+
T Consensus 104 -s~~~~~~y~~~~~~~~~~~~t~~~ipy-~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~g~~~~~~g 181 (460)
T PRK11462 104 -SMNGKMIYAAITYTLLTLLYTVVNIPY-CALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVNLIGGDNKPLG 181 (460)
T ss_pred -CcchHHHHHHHHHHHHHHHHHHHhccH-HHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhh
Confidence 000111223333334444444444444 377788876 7899999998888888888777777665554332
Q ss_pred chhhHHHHHHHHHHHHhhheEEcccC
Q psy15864 398 LWGTLYFYAAISVVGTLYMYFVMPET 423 (553)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~pet 423 (553)
+.....+++++.+++.++++...+|.
T Consensus 182 ~~~~~~i~~ii~~i~~~i~~~~~kE~ 207 (460)
T PRK11462 182 FQGGIAVLSVVAFMMLAFCFFTTKER 207 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcceec
Confidence 33334445555555555555555654
No 233
>KOG2325|consensus
Probab=97.99 E-value=2.8e-05 Score=78.80 Aligned_cols=145 Identities=10% Similarity=0.008 Sum_probs=101.7
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhcccCC-cceeecchhHHHHHHHHHHHHHHhhcccCCCCChhHHHHHHHHHHHHhhhhc
Q psy15864 273 YFATLLLGVAELGGALLCVVLIHYTGK-RPLALISTGGSAACFIVVAVYAQFHLSYGWDSPLVPTVFLVLAAFLTHICIR 351 (553)
Q Consensus 273 ~~~~~~~~i~~~~g~~~~g~l~dr~Gr-r~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (553)
.+......++.++++++.|+...|.+. |+.++.++++++++.++...+.... ....+.+++++++.|++.+..
T Consensus 74 G~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli~s~ii~~~g~llY~~l~~~~----~~~~y~mL~~R~l~Gvg~~n~-- 147 (488)
T KOG2325|consen 74 GLVIAASSLGHAIFSLIFGIWSNKTGSVKKPLIVSFLIAIIGNLLYLALAYVP----NGVKYLMLVARILTGVGVGNF-- 147 (488)
T ss_pred hHHHHHHHHHHHhcchhhcccccccCCcccCHHHHHHHHHHHHHHHHHHHhcc----cchHHHHHHHHHHcCcCcccH--
Confidence 367777889999999999999999886 8888899999999999885554321 226677888899888865433
Q ss_pred cccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhHHHHhh------------cc-chhhHHHHHHHHHHHHhhheE
Q psy15864 352 LLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYYPMLDT------------FH-LWGTLYFYAAISVVGTLYMYF 418 (553)
Q Consensus 352 ~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~~------------~g-~~~~~~~~~~~~~~~~~~~~~ 418 (553)
.+.=.|+++..-.+.|.++++.......++.++||.+...+..- +. +..+.++.+++.++..+++++
T Consensus 148 a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~ 227 (488)
T KOG2325|consen 148 AVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAFTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILF 227 (488)
T ss_pred HHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHHhhhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHh
Confidence 33348999988888888888877766666666666554433210 11 123445556666666677777
Q ss_pred EcccC
Q psy15864 419 VMPET 423 (553)
Q Consensus 419 ~~pet 423 (553)
++.|-
T Consensus 228 ~f~E~ 232 (488)
T KOG2325|consen 228 FFKEV 232 (488)
T ss_pred heeec
Confidence 77775
No 234
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=97.96 E-value=0.0001 Score=70.95 Aligned_cols=155 Identities=19% Similarity=0.095 Sum_probs=116.7
Q ss_pred hhhHHHHhhHHHHHHhhCCCCC-hHHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHHHHHHHHHhhcccC
Q psy15864 250 GGMTTLQTYAVGIFESIHAPLD-PYFATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAACFIVVAVYAQFHLSYG 328 (553)
Q Consensus 250 ~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~ 328 (553)
..+..+...++.+.++.+.+.+ ..+.+.+..++..+.++++.+++.|+|..+.+.+++++.+++.++=..
T Consensus 26 ~~itsvgPLL~~Ir~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Llli~~G~~iR~~--------- 96 (395)
T COG2807 26 PAITSVGPLLDEIRQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLIAAGILIRSL--------- 96 (395)
T ss_pred hhhhhhhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHHHHHHHHHhc---------
Confidence 3455566667777777777644 346677777777888899999999999999988888877777765443
Q ss_pred CCCChhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhHHHHhhc-cchhhHHHHHH
Q psy15864 329 WDSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYYPMLDTF-HLWGTLYFYAA 407 (553)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~~~-g~~~~~~~~~~ 407 (553)
.+.+.++.+..+.+.+.+.+-.-+| ..+-+-||.+. +..+|++.....+++.+++.+..++.++. +|...+.+++.
T Consensus 97 -~~~~~L~~gt~l~G~gIav~nVLLP-slIK~~Fpk~~-~~mtglYs~sl~~~aaLaa~lavpla~~~~gW~~aL~~WAl 173 (395)
T COG2807 97 -GGLPLLFLGTLLAGAGIAVINVLLP-SLIKRDFPKRV-GLMTGLYSTSLGAGAALAAALAVPLAQHSGGWRGALGFWAL 173 (395)
T ss_pred -ccHHHHHHHHHHHHhhHHHHHHhhh-HHHHhhcccch-hhHHhHHHHHHHHHHHHHhhhhhHHHHhhccHHHHHHHHHH
Confidence 2456677777788887776665665 77888898776 88999999999999999999988888776 56666666666
Q ss_pred HHHHHHhhh
Q psy15864 408 ISVVGTLYM 416 (553)
Q Consensus 408 ~~~~~~~~~ 416 (553)
.+++.+++.
T Consensus 174 ~allAl~~W 182 (395)
T COG2807 174 LALLALLIW 182 (395)
T ss_pred HHHHHHHHH
Confidence 666655543
No 235
>PRK09848 glucuronide transporter; Provisional
Probab=97.90 E-value=0.00012 Score=75.99 Aligned_cols=117 Identities=11% Similarity=0.000 Sum_probs=58.5
Q ss_pred hhHHHHHHh-hCCCC-ChHHHHHHHHHHHHHHHHHHhhhhccc----CCccee-ecchhHHHHHHHHHHHHHHhhcccCC
Q psy15864 257 TYAVGIFES-IHAPL-DPYFATLLLGVAELGGALLCVVLIHYT----GKRPLA-LISTGGSAACFIVVAVYAQFHLSYGW 329 (553)
Q Consensus 257 ~~~~~~~~~-~g~~~-~~~~~~~~~~i~~~~g~~~~g~l~dr~----Grr~~l-~~~~~~~~i~~~~~~~~~~~~~~~~~ 329 (553)
.|++.++.+ .|++. ......++..+..++..++.|+++||. |||+.. +++.++..+..+++...+. .. ...
T Consensus 29 ~~l~~y~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~ 106 (448)
T PRK09848 29 LFLLSYYTDVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSVLVFWVPT-DW-SHS 106 (448)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHHHHHHHhCcC-CC-Ccc
Confidence 334444443 46653 234666677788899999999999996 666544 4444444444333322110 00 000
Q ss_pred CCChhHHHHHHHHHHHHhhhhccccceeecccc-ccchhhhhhhHHHH
Q psy15864 330 DSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVF-PNNIRATASGASGS 376 (553)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-p~~~Rg~~~~~~~~ 376 (553)
...+..++..++.+.+.+....+.. ++..++. +++.|....++-..
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~-al~~~~~~~~~~r~~~~~~r~~ 153 (448)
T PRK09848 107 SKVVYAYLTYMGLGLCYSLVNIPYG-SLATAMTQQPQSRARLGAARGI 153 (448)
T ss_pred hHHHHHHHHHHHHHHHHHHhcccHh-hhhhhhcCCHHHHHHHHHHHHH
Confidence 1111222333444444444443332 4445554 44667776554433
No 236
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=97.85 E-value=0.00014 Score=78.00 Aligned_cols=149 Identities=10% Similarity=-0.107 Sum_probs=92.0
Q ss_pred hCCCCChH-HHHHHHHHHHHHHHHHHhhhhcc-cCCcceeecchhHHHHHHHHHHHHHHhhcccCCCCChhHHHHHHHHH
Q psy15864 266 IHAPLDPY-FATLLLGVAELGGALLCVVLIHY-TGKRPLALISTGGSAACFIVVAVYAQFHLSYGWDSPLVPTVFLVLAA 343 (553)
Q Consensus 266 ~g~~~~~~-~~~~~~~i~~~~g~~~~g~l~dr-~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (553)
.+++.... .....+....-+..+++|+++|+ +||+++++++.++..++.+++++..... ..........+++..+..
T Consensus 18 lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~-~~~~~~~~~~l~gLaLia 96 (654)
T TIGR00926 18 LGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPS-SGHPLHDLLDLLGLALIA 96 (654)
T ss_pred cCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcc-cccchHHHHHHHHHHHHH
Confidence 45443322 33334444455667788899996 7999999999988888887776521100 000001122444555555
Q ss_pred HHHhhhhccccceeeccccccc---hhhhhhhHHHHHHHHHHHHHHHHhHHHHhhc-------cchhhHHHHHHHHHHHH
Q psy15864 344 FLTHICIRLLPWMLIGEVFPNN---IRATASGASGSSSYIFAFAVNKLYYPMLDTF-------HLWGTLYFYAAISVVGT 413 (553)
Q Consensus 344 ~~~~~~~~~~~~~~~~e~~p~~---~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~~~-------g~~~~~~~~~~~~~~~~ 413 (553)
++.|..-..+. +...|.++++ .|-....+.+.+.++|+++++.+.+++.+.. +|+..+.+.+++.++++
T Consensus 97 ~G~GgiKp~vs-af~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~i~~i~m~ia~ 175 (654)
T TIGR00926 97 LGTGGIKPCVS-AFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAFGVPAILMILAL 175 (654)
T ss_pred hhccccccCch-hhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHHHHHHHHHH
Confidence 55555544444 8888888754 3666778888889999999998888876443 45556666555555555
Q ss_pred hhh
Q psy15864 414 LYM 416 (553)
Q Consensus 414 ~~~ 416 (553)
++.
T Consensus 176 lvf 178 (654)
T TIGR00926 176 IVF 178 (654)
T ss_pred HHH
Confidence 444
No 237
>KOG3810|consensus
Probab=97.84 E-value=0.00013 Score=69.34 Aligned_cols=257 Identities=12% Similarity=0.082 Sum_probs=139.6
Q ss_pred hhhhhhhhccCcccccchhchhhhhHHHHHHHHHhhcccc------chHHHHHHHHHHHHHHHHHhccccCCceeeeecC
Q psy15864 102 LVLTYVAEITQPHLRGMLSATASMTTIFGTVSQLFLGSFL------HWRSAAILNLLFPILALCALYFIPESPHWLISQG 175 (553)
Q Consensus 102 ~~~~~i~e~~p~~~Rg~~~~~~~~~~~lG~~l~~~l~~~l------gWr~~f~i~~i~~li~~i~~~~lpEsp~~l~~~~ 175 (553)
.-++|+-...+++++.++.+...++...|..+|..++..+ +...+=.+......+++++.+++|..+|-+.-+.
T Consensus 114 AYysYIYs~Vd~~~Yqrvt~y~RaA~L~g~~~g~vlaQlLvs~~~~sy~~LN~ISL~~~~ia~~~A~fLP~v~rSl~f~~ 193 (433)
T KOG3810|consen 114 AYYSYIYSKVDPEMYKRVTGYCRAAFLVGKFVGSVLAQLLVSLETLSYTTLNYISLAEVTIAVLLALFLPRVKRSLYFHR 193 (433)
T ss_pred hhhheeeeecCHHHHHHHHHHhHHHHHHHhHHHhHHHHHHhhhcccchhhhchhhHHHHHHHHHHHhhCCCCchhhhhhc
Confidence 3447888888999999999999998888888888877765 4444444544444555666677776553221111
Q ss_pred ChHHHHHHHHHHcCCCCCcchHHHHHHHHHHHHHHHHHhcCCCCCCChhhhhhhhhcchhHHHHHHHHHHHHhhhhhHHH
Q psy15864 176 RMQEASASLCWLRGWVTPDKVQTELSQITKAIEESELKRLGKDGQRRPNYRMYMRRTFLLPYAIVTSLFFIGQFGGMTTL 255 (553)
Q Consensus 176 ~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (553)
..++ .........+. +.......+.. - ..+..-+......+.++...++++...++++-.
T Consensus 194 ~~~~--~~v~~~e~~~~----~~~~~~~l~~~---~-----------~~l~~~l~~~y~np~ll~WSlWwAl~scg~~QV 253 (433)
T KOG3810|consen 194 LEDK--ISVGDLEEMNP----QASYMSYLRGA---F-----------VLLWRDLQECYSNPRLLKWSLWWALASCGYYQV 253 (433)
T ss_pred cccc--ceeccchhcCc----cchhhHHHHHH---H-----------HHHHHHHHHHhcCchhhhhHHHHHHhhchhHHH
Confidence 1110 00000000000 00000000000 0 001111122233444556666777778888888
Q ss_pred HhhHHHHHHhhCCCCChH---HHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHHHHHHHHHhhcccCCCCC
Q psy15864 256 QTYAVGIFESIHAPLDPY---FATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAACFIVVAVYAQFHLSYGWDSP 332 (553)
Q Consensus 256 ~~~~~~~~~~~g~~~~~~---~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 332 (553)
..|...+........... ..-.+..+.++++.++.|++--.+.|..-++++..-...+.+++... ..++.
T Consensus 254 ~nY~Q~LW~~~~~~~~~vyNG~veAv~tlLGa~~~~~~g~l~i~w~r~g~~ll~~~s~~~agllf~m~-------~t~~I 326 (433)
T KOG3810|consen 254 TNYTQILWKEVAPNPANVYNGAVEAVSTLLGAIAALAAGYLNINWNRWGDLLLAVGSAVQAGLLFIMA-------QTQHI 326 (433)
T ss_pred HHHHHHHHHhhCCCchhhhcCHHHHHHHHHHHHHHHHHHheeeccchhhHHHHHHHHHHhhhhhhhhh-------cccce
Confidence 888877766554221111 22334556677788888988777776643333322222222222211 16678
Q ss_pred hhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHHHHH
Q psy15864 333 LVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVN 386 (553)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~ 386 (553)
|+.++...++...+.+...... .-+++....+.-|...|+..++.-+...+..
T Consensus 327 w~~Ya~yvlfr~~y~l~itiA~-~~iA~nL~~e~~gLvFGiNTFvAl~lQsilT 379 (433)
T KOG3810|consen 327 WVCYAGYVLFRVIYQLTITIAT-FQIARNLSSELFGLVFGINTFVALILQSILT 379 (433)
T ss_pred ehhhhhHHHHHhhHhhhhhHHH-HHHHHhhhhhhheeeeehHHHHHHHHHHhhe
Confidence 8888887777776655543333 3344445556668888887776665555544
No 238
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=97.81 E-value=0.00019 Score=61.74 Aligned_cols=108 Identities=9% Similarity=-0.001 Sum_probs=83.3
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHHHHHHHHHhhcccCCCCChhHHHHHHHHHHHHhhhhcc
Q psy15864 273 YFATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAACFIVVAVYAQFHLSYGWDSPLVPTVFLVLAAFLTHICIRL 352 (553)
Q Consensus 273 ~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (553)
.....+......+++++++.+.+++|.|+.++++.+...+-.+... ..+.+.++....+.|++.+..|.+
T Consensus 40 ~~slai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~~----------~~~~~~l~~~s~l~G~~~a~lW~a 109 (156)
T PF05978_consen 40 YYSLAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIASFF----------YPNSYTLYPASALLGFGAALLWTA 109 (156)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHHH----------hhhHHHHHHHHHHHhhhhHHhhHh
Confidence 4556667777888889999999999999999988877765544433 234567788888899988888877
Q ss_pred ccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhHH
Q psy15864 353 LPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYYP 391 (553)
Q Consensus 353 ~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~ 391 (553)
.. .|+.+...++.|++-.++...+...+.+++..+.-.
T Consensus 110 qg-~ylt~~s~~~~~~~~~~ifw~i~~~s~i~G~~~~~~ 147 (156)
T PF05978_consen 110 QG-TYLTSYSTEETIGRNTGIFWAIFQSSLIFGNLFLFF 147 (156)
T ss_pred hh-HHHHHcCCHHHHhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 65 899999999999998888887777766666654433
No 239
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=97.79 E-value=4.5e-05 Score=76.25 Aligned_cols=170 Identities=8% Similarity=-0.058 Sum_probs=86.0
Q ss_pred HHHHHHHhhhhhHHHHhhHHHHHHh-hCCCC-ChHHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHH--HHHH
Q psy15864 241 TSLFFIGQFGGMTTLQTYAVGIFES-IHAPL-DPYFATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAA--CFIV 316 (553)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~-~~~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i--~~~~ 316 (553)
.....+.++..+.....|.+.++++ .|++. +.....++..+..++..++.|.++||+|.|+-++....+..+ +.+.
T Consensus 12 ~s~~~f~~Ff~~gi~~pF~~iWL~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll~~i~~l~~l~~pff 91 (412)
T PF01306_consen 12 LSLFYFFYFFIWGIFLPFFPIWLTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKLGLKKHLLWFIAILLLLFGPFF 91 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHHHHHHHHHHTCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchhhhhHHHHHHHHHHHHHHHHHH
Confidence 3334444444455666667777765 67764 345777777888999999999999999977765544332221 1111
Q ss_pred H-HHHHHhhcccCCCCChhHHHHHHHHHHHHhhhhccccceeeccccccc---hhhhhhhHHHHHHHHHHHHHHHHhHHH
Q psy15864 317 V-AVYAQFHLSYGWDSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNN---IRATASGASGSSSYIFAFAVNKLYYPM 392 (553)
Q Consensus 317 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~---~Rg~~~~~~~~~~~~~~~i~~~~~~~~ 392 (553)
+ .+.+.. ..+. +++.++.+...+..+.+.. =+.|.+-.+ ..+.-.|=.-..+.+|.+++..+.|.+
T Consensus 92 ~~v~~pll-----~~n~---~lg~iig~i~l~~~f~~~~--~~~Ea~~er~sr~~~feYG~~R~wGSig~ai~s~~~G~L 161 (412)
T PF01306_consen 92 IYVFGPLL-----QSNF---WLGAIIGGIYLGLVFNAGV--PLSEAYAERVSRRNGFEYGRARMWGSIGFAIASLLAGIL 161 (412)
T ss_dssp HHTHHHHH-----HTT----HHHHHHTTTTTTTTTTTHH--HHHHHHHHHHHHHHSS-HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHH-----HHHH---HHHHHHHHHHHHHHHcccc--hHHHHHHHHHHHHhcCCcchHHHHhhHHHHHHHHHhhee
Confidence 1 111110 1121 2222222333333333321 112433221 223344566677888888888888888
Q ss_pred HhhccchhhHHHHHHHHHHHHhhheEEcc
Q psy15864 393 LDTFHLWGTLYFYAAISVVGTLYMYFVMP 421 (553)
Q Consensus 393 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~p 421 (553)
.+. +....+++..+..++..++.++..|
T Consensus 162 ~~i-~p~~~fwi~s~~~~il~lll~~~~~ 189 (412)
T PF01306_consen 162 FNI-NPNIIFWIASAAAIILLLLLLLLKP 189 (412)
T ss_dssp HHH-HHHHHHHHHHHHHHHHHHHHHSS--
T ss_pred eee-CccHHHHHHHHHHHHHHHHHHHcCC
Confidence 763 3344555444444444444434333
No 240
>KOG2563|consensus
Probab=97.76 E-value=0.00016 Score=71.51 Aligned_cols=120 Identities=13% Similarity=-0.027 Sum_probs=81.7
Q ss_pred ChHHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHHHHHHHHHhhcccCCCCCh--hHHHHHHHHHHHHhh
Q psy15864 271 DPYFATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAACFIVVAVYAQFHLSYGWDSPL--VPTVFLVLAAFLTHI 348 (553)
Q Consensus 271 ~~~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 348 (553)
...|...++.+..++-.+.+.|+.|++|-|..++++.++.+++..+=.+...... .+..+ +...+..+.+.+. .
T Consensus 80 ~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~llgt~ln~iGa~Ir~iss~p~v---~~~f~~~l~~~Gq~iaa~Aq-~ 155 (480)
T KOG2563|consen 80 AADWLSMIYMVVSVPFGFAAMWILDKFGLRTALLLGTVLNGIGAWIRLISSLPFV---PPLFRRPLTHTGQSIAAAAQ-P 155 (480)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHhhcccchHHHHHHHHHHHHHHHHHhhhccCccc---cccchhhhhHHhHHHHHHhh-h
Confidence 3457788888999999999999999999999999999999988877655321000 12223 3334444444433 2
Q ss_pred hhccccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhHHHHh
Q psy15864 349 CIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYYPMLD 394 (553)
Q Consensus 349 ~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~ 394 (553)
....+|.-...-.+|++.|+++..+......+|..++..+-+.+..
T Consensus 156 Fim~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~llppilV~ 201 (480)
T KOG2563|consen 156 FILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLLPPILVP 201 (480)
T ss_pred HhhccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhhccceecC
Confidence 2233432344456899999999988888777887777665555553
No 241
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=97.74 E-value=0.00056 Score=70.92 Aligned_cols=143 Identities=13% Similarity=0.082 Sum_probs=89.6
Q ss_pred HHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHH-HHHHHHHHHHhhcccCCCCChhHHHHHHHHHHHHhhhhccc
Q psy15864 275 ATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAA-CFIVVAVYAQFHLSYGWDSPLVPTVFLVLAAFLTHICIRLL 353 (553)
Q Consensus 275 ~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (553)
...+..+...+..++.|-++|+-++|+.++..+.+.++ +.+++.+.. ....+...+..++...+++.+. ..
T Consensus 75 ~~sis~l~~all~P~lGa~aD~~~~Rk~~l~~~~~~~~~~~~~l~~v~-------~~~~~~~~~l~iia~v~~~~~~-vf 146 (477)
T PF11700_consen 75 ANSISGLLQALLAPFLGAIADYGGRRKRFLLIFTLLGVLATALLWFVS-------PGQWWLALVLFIIANVGYEASN-VF 146 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhC-------cchHHHHHHHHHHHHHHHHHHH-HH
Confidence 34455566677778889999999988776655544443 333333321 2233333444444444444443 33
Q ss_pred cceeeccccccchh--------------------------hhhhhHHHHHHHHHHHHHHHHhHHHHhhcc--------ch
Q psy15864 354 PWMLIGEVFPNNIR--------------------------ATASGASGSSSYIFAFAVNKLYYPMLDTFH--------LW 399 (553)
Q Consensus 354 ~~~~~~e~~p~~~R--------------------------g~~~~~~~~~~~~~~~i~~~~~~~~~~~~g--------~~ 399 (553)
..+|+.|+.+++.+ +...+....++++|+++.-.+.-.++...+ ..
T Consensus 147 yna~LP~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~~~~~~~~r 226 (477)
T PF11700_consen 147 YNAYLPDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGSTASNTWAIR 226 (477)
T ss_pred HHHHhHhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccchhhh
Confidence 35888999988888 899999999999998887666554442222 23
Q ss_pred hhHHHHHHHHHHHHhhheEEcccCCC
Q psy15864 400 GTLYFYAAISVVGTLYMYFVMPETEG 425 (553)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~~~pet~~ 425 (553)
..+.+.++..++..+..++++|+.++
T Consensus 227 ~~~~~~a~ww~vfsiP~~~~~~~~~~ 252 (477)
T PF11700_consen 227 VAFLIVALWWLVFSIPLFLWLPDRPG 252 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCC
Confidence 34555556666666677778888754
No 242
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=97.69 E-value=0.00039 Score=70.48 Aligned_cols=168 Identities=14% Similarity=0.090 Sum_probs=100.2
Q ss_pred hHHHHhhHHHHHHh-hCCCCC-hHHHHHHHHHHHHHHHHHHhhhhcc----cCCcc-eeecchhHHHHHHHHHHHHHHhh
Q psy15864 252 MTTLQTYAVGIFES-IHAPLD-PYFATLLLGVAELGGALLCVVLIHY----TGKRP-LALISTGGSAACFIVVAVYAQFH 324 (553)
Q Consensus 252 ~~~~~~~~~~~~~~-~g~~~~-~~~~~~~~~i~~~~g~~~~g~l~dr----~Grr~-~l~~~~~~~~i~~~~~~~~~~~~ 324 (553)
......|+..++.+ .|.+.. .....++.=+.-++.-++.|.++|| +||++ .++++.+..++.+.++...+.+
T Consensus 28 ~~~~~~yLl~fYTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~~~l~F~~p~~- 106 (467)
T COG2211 28 FGIVVLYLLFFYTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIVAVLLFITPDF- 106 (467)
T ss_pred HHHHHHHHHHHHhcccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHHHHHHHHcCCCc-
Confidence 34444555555543 454422 2244444456677888899999997 56644 4556656666666555542210
Q ss_pred cccCCCCChhHHHHHHHHHHHHhhhhccccceeeccccc-cchhhhhhhHHHHHHHHHHHHHHHHhHHHHhhc-------
Q psy15864 325 LSYGWDSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFP-NNIRATASGASGSSSYIFAFAVNKLYYPMLDTF------- 396 (553)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p-~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~~~------- 396 (553)
.........++..++++.++.....|-. ++.+|+.+ ++.|....+.-..+..+++++...+.++++...
T Consensus 107 --~~~~k~~ya~vtY~l~~l~YT~vniPy~-al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~plv~~~g~~~~~~ 183 (467)
T COG2211 107 --SMTGKLIYALVTYMLLGLGYTLVNIPYG-ALGPEITQDPQERASLTSWRMVFASLGGLLVAVLFPPLVKLFGGGDKAL 183 (467)
T ss_pred --ccCcchHHHHHHHHHHHHHHHheeCchh-hcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchh
Confidence 0012334445555566666655544443 77778764 578999888888888888888887777776433
Q ss_pred cchhhHHHHHHHHHHHHhhheEEcccC
Q psy15864 397 HLWGTLYFYAAISVVGTLYMYFVMPET 423 (553)
Q Consensus 397 g~~~~~~~~~~~~~~~~~~~~~~~pet 423 (553)
|+.....+++++.++..+++++-.+|.
T Consensus 184 g~~~~~~~~~vi~~i~~l~~~~~v~ER 210 (467)
T COG2211 184 GYQGTALVLGVIGVILLLFCFFNVKER 210 (467)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 444455555555555666666555553
No 243
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=97.67 E-value=0.00028 Score=71.54 Aligned_cols=129 Identities=13% Similarity=-0.039 Sum_probs=71.3
Q ss_pred HHhhhhhHHHHhhHHHHHHhhCCCC-ChHHHHHHHHHHHHHHHHHHhhhhcccCC-cceeecchhHHHHHHHHHHHHHHh
Q psy15864 246 IGQFGGMTTLQTYAVGIFESIHAPL-DPYFATLLLGVAELGGALLCVVLIHYTGK-RPLALISTGGSAACFIVVAVYAQF 323 (553)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~i~~~~g~~~~g~l~dr~Gr-r~~l~~~~~~~~i~~~~~~~~~~~ 323 (553)
+.++..+.....|.+.+++..|++. +.....++..+..+++.++.|+++||.++ ++.+.+..++.++..++...
T Consensus 12 f~~f~~~G~~~p~~~~~L~~~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~~~~---- 87 (400)
T PF03825_consen 12 FLYFFAYGAFLPYLPLYLESRGFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALLLLAF---- 87 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHHHHH----
Confidence 3334445555667788888888764 44577778889999999999999999875 45554444444443333322
Q ss_pred hcccCCCCChhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHHHHH
Q psy15864 324 HLSYGWDSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVN 386 (553)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~ 386 (553)
..+.+.+++..+++.++.. ...++.-++..+... .++.-.|-.-..+.+|-+++.
T Consensus 88 -----~~~f~~~~~~~~l~~~~~~-p~~pl~dsi~~~~~~--~~~~~YG~iRlwGSiGf~~~~ 142 (400)
T PF03825_consen 88 -----SSSFWWLFVIMLLFSFFFS-PTMPLSDSIALSYLG--DRGKDYGRIRLWGSIGFIVAA 142 (400)
T ss_pred -----hccHHHHHHHHHHHHHHHc-cHHHHHHHHHHHHcc--cccCCCCcchhhhhHHHHHHH
Confidence 3344555544444444332 222333233333332 223344444445555544443
No 244
>KOG3098|consensus
Probab=97.57 E-value=0.0018 Score=65.65 Aligned_cols=115 Identities=16% Similarity=0.140 Sum_probs=70.4
Q ss_pred HHHHHHHHHHHHHHHHHhhhhcc---cCCcceeecchhHHHHHHHHHHHHHHhhcc-cC--------CCCChhHHHHHHH
Q psy15864 274 FATLLLGVAELGGALLCVVLIHY---TGKRPLALISTGGSAACFIVVAVYAQFHLS-YG--------WDSPLVPTVFLVL 341 (553)
Q Consensus 274 ~~~~~~~i~~~~g~~~~g~l~dr---~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~-~~--------~~~~~~~~~~~~~ 341 (553)
...+..+++.+++.+..+.+.+| +||++++.++.++..+++++.........+ .+ .+.....++..++
T Consensus 283 i~~~~~g~g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~l 362 (461)
T KOG3098|consen 283 IYSIGIGLGEVIGGLDFSILSKRIRGFGRKPTVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIGFL 362 (461)
T ss_pred HHHHHHhHHHHHHHHHHHHHhhhhhhcccCcchhHHHHHHHHHHHHHhccccccCCCCCCcccccccccchhHHHHHHHH
Confidence 44556778888888888888865 688888888888777777666543221110 00 1122244455555
Q ss_pred HHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhH
Q psy15864 342 AAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYY 390 (553)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~ 390 (553)
.|++- .++....+.+++..+ ++.|..+.++.-+-..+.+.++-+..+
T Consensus 363 ~G~~D-~~~~t~~~~ii~~~~-~~~~~~~fsi~kfyq~~~s~v~~f~~~ 409 (461)
T KOG3098|consen 363 LGFGD-ACFNTQRYVIIALLY-PDDRAQAFSLFKFYQSVASCVAFFFSP 409 (461)
T ss_pred HhhHH-HHHHHHHHHHHHHHh-cCchHHHHHHHHHHHHHHHHHHhhhhh
Confidence 55554 334444567788888 566788887776666666655543333
No 245
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=97.50 E-value=0.00074 Score=66.64 Aligned_cols=126 Identities=9% Similarity=0.002 Sum_probs=78.6
Q ss_pred HHHHHHhhhhcccC-----Ccceeec-chhHHHHHHHHHHHHHHhhcc---cCCCCChhH----HHHHHHHHHHHhhhhc
Q psy15864 285 GGALLCVVLIHYTG-----KRPLALI-STGGSAACFIVVAVYAQFHLS---YGWDSPLVP----TVFLVLAAFLTHICIR 351 (553)
Q Consensus 285 ~g~~~~g~l~dr~G-----rr~~l~~-~~~~~~i~~~~~~~~~~~~~~---~~~~~~~~~----~~~~~~~~~~~~~~~~ 351 (553)
+..+..|+.+|+.+ ||...++ +.+.+..+..+.......... ....+.+.- .+...+.|.+.+....
T Consensus 29 p~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~~~~~~g~~~a~l~F~l~G~G~~~s~T 108 (403)
T PF03209_consen 29 PLRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSSGPFWLGLALAALAFLLYGLGVHASGT 108 (403)
T ss_pred HHHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHhhHhHhHH
Confidence 45678899999988 7766554 444444444444333222211 111122222 2223334444433333
Q ss_pred cccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhHHHHhhccchhhHHHHHHHHHH
Q psy15864 352 LLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYYPMLDTFHLWGTLYFYAAISVV 411 (553)
Q Consensus 352 ~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~~~~~ 411 (553)
+. .+.++|..|++.|+.+.++...+.-+|.+++..+.+.+++.+...+..-++..+.++
T Consensus 109 ~~-lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s~~rL~~v~~~~a~i 167 (403)
T PF03209_consen 109 SF-LALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFSPERLIQVIQGVALI 167 (403)
T ss_pred HH-HHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHHHHH
Confidence 33 488899999999999999999999999999999999998877655544444443333
No 246
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=97.37 E-value=0.011 Score=60.13 Aligned_cols=128 Identities=17% Similarity=0.017 Sum_probs=74.4
Q ss_pred hHHHHHHhhCCCCCh-HHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHHHHHHHHHhhccc-CCCCChhH
Q psy15864 258 YAVGIFESIHAPLDP-YFATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAACFIVVAVYAQFHLSY-GWDSPLVP 335 (553)
Q Consensus 258 ~~~~~~~~~g~~~~~-~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~-~~~~~~~~ 335 (553)
.+..|+...|++... +..-.+..+.++.|+++..++.+|+|-.+.-+++.....++..+.....+....+ +..+...+
T Consensus 280 lmt~yl~~~G~s~~~igi~R~~gav~Gl~gT~~~p~l~~riGlvr~G~~~l~~q~~~L~~~v~~~~~~~~~~~~~s~~~l 359 (432)
T PF06963_consen 280 LMTAYLKSQGYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGLVRAGLWSLWWQWVCLALCVVSFWAPGSPFSSISAYLL 359 (432)
T ss_pred HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHH
Confidence 344455555765433 3445566788899999999999999988777777665554444433322211100 01112222
Q ss_pred HHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHHHHH
Q psy15864 336 TVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVN 386 (553)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~ 386 (553)
+.+..+.-++. .++-....-++.|..|++.||+..|+-+...++...+.-
T Consensus 360 ~~gi~~SR~GL-W~fDL~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ll~~ 409 (432)
T PF06963_consen 360 LGGIALSRIGL-WSFDLAVTQIMQENVPESERGAVSGVQNSLQSLFELLSF 409 (432)
T ss_pred HHHHHHHHHHH-HhhhHHHHHhhcccCCHHHhhHHHHHHHHHHHHHHHHHH
Confidence 22222222222 222222235678999999999999998888877766553
No 247
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=97.34 E-value=0.00071 Score=69.60 Aligned_cols=133 Identities=20% Similarity=0.188 Sum_probs=85.2
Q ss_pred HHHHHHhhhhcccC-----CcceeecchhHHHHHHHHHHHHHHhhcccCCCCChhHHHHHHHHHHHHhhhhccccceeec
Q psy15864 285 GGALLCVVLIHYTG-----KRPLALISTGGSAACFIVVAVYAQFHLSYGWDSPLVPTVFLVLAAFLTHICIRLLPWMLIG 359 (553)
Q Consensus 285 ~g~~~~g~l~dr~G-----rr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (553)
..-++.|.++|-+. ||+-++++.++.+++++.++..... ..+.....+..++..++....-.. .-+.+.
T Consensus 39 ~~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~-----~~s~~~~~~~l~la~~g~a~~DV~-aDa~vv 112 (433)
T PF03092_consen 39 SIKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPAS-----ESSAAIAVVLLFLASFGYAFADVA-ADALVV 112 (433)
T ss_pred HHhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccc-----cchhhhHHHHHHHHHHHHHHHHHh-hhHHHH
Confidence 34577899999862 4555666666665555555543210 123333334444444444333322 235666
Q ss_pred ccc---ccchhhhhhhHHHHHHHHHHHHHHHHhHHHHhhccchhhHHHHHHHHHHHHhhheEEcccCC
Q psy15864 360 EVF---PNNIRATASGASGSSSYIFAFAVNKLYYPMLDTFHLWGTLYFYAAISVVGTLYMYFVMPETE 424 (553)
Q Consensus 360 e~~---p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~pet~ 424 (553)
|.. |.. ||...+....+..+|++++..+.|++.+..+....+.+.+++..+..+..+++.+|.+
T Consensus 113 E~~~~~p~~-~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~~~~f~i~~~~~~l~~~~~~~~~~e~~ 179 (433)
T PF03092_consen 113 ELARREPES-RGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGPQGVFLISAALPLLMLIVALFLLEERK 179 (433)
T ss_pred HHhhcCCch-hHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCeEEehHHHHHHHHHHHHHHHhhhhcc
Confidence 765 333 7888888888899999999999999998888777777777777777666667777743
No 248
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=97.26 E-value=0.006 Score=56.38 Aligned_cols=51 Identities=18% Similarity=0.213 Sum_probs=37.8
Q ss_pred ccccchhchhhhhHHHHHHHHHh--hcc-cc------chHHHHHHHHHHHHHHHHHhccc
Q psy15864 114 HLRGMLSATASMTTIFGTVSQLF--LGS-FL------HWRSAAILNLLFPILALCALYFI 164 (553)
Q Consensus 114 ~~Rg~~~~~~~~~~~lG~~l~~~--l~~-~l------gWr~~f~i~~i~~li~~i~~~~l 164 (553)
++|+..+.+-..++++|.++..+ +.. -. .|++++.+.+++.++.+++..++
T Consensus 2 k~K~~~s~~n~~gf~iG~ii~~ipF~~~~~~~~~~~~~W~~I~si~~lL~~IpLIly~if 61 (267)
T PF07672_consen 2 KKKSILSQFNPWGFNIGTIIVNIPFLISSSVVIALTNNWQWILSIFILLIFIPLILYIIF 61 (267)
T ss_pred CccceeeeeccccchhhHHHHHhhHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 57888888889999999887543 322 11 79999999998887776665544
No 249
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=97.25 E-value=0.0052 Score=59.40 Aligned_cols=115 Identities=16% Similarity=-0.000 Sum_probs=72.8
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHHHHHHHHHhhcccCCCCChhHHHHHHHHHHHHhhhhc
Q psy15864 272 PYFATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAACFIVVAVYAQFHLSYGWDSPLVPTVFLVLAAFLTHICIR 351 (553)
Q Consensus 272 ~~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (553)
..+......++..++.++.|.++||+|||+.+..+.....++.++..+.. ....+.+++.++..+++.+...
T Consensus 41 ~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~g~~~~~~~- 112 (338)
T COG0477 41 YGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALAP-------NVGLALLLILRLLQGLGGGGLL- 112 (338)
T ss_pred HHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHhCc-------cchHHHHHHHHHHHHhhhHHHH-
Confidence 34666677777888889999999999999666666554334433333310 1134555556665566554333
Q ss_pred cccceeecccccc-chhhhhhhHHHH-HHHHHHHHHHHHhHHHHh
Q psy15864 352 LLPWMLIGEVFPN-NIRATASGASGS-SSYIFAFAVNKLYYPMLD 394 (553)
Q Consensus 352 ~~~~~~~~e~~p~-~~Rg~~~~~~~~-~~~~~~~i~~~~~~~~~~ 394 (553)
+....++.|.+|. ..|+...+.... ...++..+++.+.+.+..
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (338)
T COG0477 113 PVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLG 157 (338)
T ss_pred HHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4445888999987 567887777766 455666666655554443
No 250
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=97.22 E-value=0.00031 Score=59.31 Aligned_cols=76 Identities=29% Similarity=0.451 Sum_probs=59.6
Q ss_pred ccccccccc--chhhhhhhhhccCcccccchhchhhhhHHHHHHHHHhhcccc----chHHHHHHHHHHHHHHHHHhcc-
Q psy15864 91 TFLYKMAAP--LVLVLTYVAEITQPHLRGMLSATASMTTIFGTVSQLFLGSFL----HWRSAAILNLLFPILALCALYF- 163 (553)
Q Consensus 91 r~~~G~ga~--~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~lG~~l~~~l~~~l----gWr~~f~i~~i~~li~~i~~~~- 163 (553)
+++.|++.. .+...+++.|.+|+++|++..++...+..+|..+++.+++.+ +|++.|++.+++.++..+..++
T Consensus 58 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (141)
T TIGR00880 58 RFLQGFGAAFALVAGAALIADIYPPEERGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILLAFL 137 (141)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHCChhhhhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHHHhhc
Confidence 455665543 345668899999999999999999999999999988887765 8999999988887777555444
Q ss_pred ccC
Q psy15864 164 IPE 166 (553)
Q Consensus 164 lpE 166 (553)
.||
T Consensus 138 ~~~ 140 (141)
T TIGR00880 138 LPE 140 (141)
T ss_pred CCC
Confidence 555
No 251
>PF12832 MFS_1_like: MFS_1 like family
Probab=97.18 E-value=0.0008 Score=50.30 Aligned_cols=65 Identities=14% Similarity=0.160 Sum_probs=50.2
Q ss_pred HHHHHhhhhhHHHHhhHHHHHHhhCCCCCh-HHHHHHHHHHHHHHHHHHhhhhcccCCcceeecch
Q psy15864 243 LFFIGQFGGMTTLQTYAVGIFESIHAPLDP-YFATLLLGVAELGGALLCVVLIHYTGKRPLALIST 307 (553)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~ 307 (553)
...+..+++...+..|.+.++++.|++... .....+..+..+++.+++|+++||+++++.++...
T Consensus 7 ~~yf~~f~~~g~~~Pfl~~~~~~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~ 72 (77)
T PF12832_consen 7 AFYFFYFAALGCLYPFLPLYLKQLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGS 72 (77)
T ss_pred HHHHHHHHHHHHHHhhhhHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHH
Confidence 345556666777788888888888886543 46666777889999999999999999988765543
No 252
>KOG0637|consensus
Probab=97.10 E-value=0.00091 Score=66.40 Aligned_cols=42 Identities=19% Similarity=0.257 Sum_probs=36.0
Q ss_pred hhhhhccCcccccc-hhchhhhhHHHHHHHHHhhccccchHHH
Q psy15864 105 TYVAEITQPHLRGM-LSATASMTTIFGTVSQLFLGSFLHWRSA 146 (553)
Q Consensus 105 ~~i~e~~p~~~Rg~-~~~~~~~~~~lG~~l~~~l~~~lgWr~~ 146 (553)
++++|...++++.+ +.+++..+.++|..+|..++.+.+|+-.
T Consensus 165 a~L~Dl~~~d~~~~~Ans~f~~f~avGnvLGY~~g~y~~~~~~ 207 (498)
T KOG0637|consen 165 ALLADLARGDAKKTRANSVFSFFMAVGNVLGYALGSYLGLYKI 207 (498)
T ss_pred HHHHHhccChhhhhccchhHHHHHHhcceeeeecccccCceEE
Confidence 88999997776666 9999999999999999999988877643
No 253
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=96.93 E-value=0.0036 Score=62.44 Aligned_cols=61 Identities=20% Similarity=0.146 Sum_probs=44.4
Q ss_pred CCChhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhHH
Q psy15864 330 DSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYYP 391 (553)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~ 391 (553)
++.|.+++..+.-|+..|..+... +..+.|-.|++.|..++|+....-.+|..+++.+.-.
T Consensus 333 psi~ivf~lif~eGLlGGa~YVNt-F~~I~~~~~~~~REFslg~vsvsds~GI~lAgll~l~ 393 (402)
T PF02487_consen 333 PSIWIVFVLIFYEGLLGGASYVNT-FYRISEEVPPEDREFSLGAVSVSDSLGILLAGLLGLP 393 (402)
T ss_pred hHHHHHHHHHHHHHHhhhHHHHHH-HHHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 456677777777777777776555 4666777899999999999887777777666654433
No 254
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=96.72 E-value=0.00023 Score=74.82 Aligned_cols=147 Identities=10% Similarity=-0.154 Sum_probs=1.3
Q ss_pred HHHhhhhhHHHHhhHHHHHHhhCCCCC-hHHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHHHHHHHHHh
Q psy15864 245 FIGQFGGMTTLQTYAVGIFESIHAPLD-PYFATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAACFIVVAVYAQF 323 (553)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~ 323 (553)
.+.+......+...++++-.+++++.. ..++.+..-++.++..++..++..|..|-+.+-++.++++++.+++++--..
T Consensus 12 ~~~q~~~~g~~~~~lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~~l~~lPhf~ 91 (539)
T PF03137_consen 12 GLFQMMVSGYVNSSLTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGSLLFALPHFL 91 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHHHHHhccHhh
Confidence 333344444455555666666777644 4477777889999999999999999888788888889999998887753221
Q ss_pred hccc-------------------------------------CCC----CChhHHHHHHHHHHHHhhhhccccceeecccc
Q psy15864 324 HLSY-------------------------------------GWD----SPLVPTVFLVLAAFLTHICIRLLPWMLIGEVF 362 (553)
Q Consensus 324 ~~~~-------------------------------------~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 362 (553)
...+ ... ..++++++.++.|++. ....++..+|+=|.+
T Consensus 92 ~~~y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~-~pl~tLG~tYiDDnv 170 (539)
T PF03137_consen 92 SGPYSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGA-TPLYTLGITYIDDNV 170 (539)
T ss_dssp ------------------------------------------------------------SSS-----------------
T ss_pred cCCCccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccc-cCCccceeeeecccc
Confidence 1000 000 1122333444444433 223355568999999
Q ss_pred ccchhhhhhhHHHHHHHHHHHHHHHHhHHH
Q psy15864 363 PNNIRATASGASGSSSYIFAFAVNKLYYPM 392 (553)
Q Consensus 363 p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~ 392 (553)
+++.-+...|+.+++..+|-++|-.+.+.+
T Consensus 171 ~~~~splYiGi~~~~~~lGPa~Gf~lg~~~ 200 (539)
T PF03137_consen 171 SKKNSPLYIGILYAMSILGPALGFLLGSFC 200 (539)
T ss_dssp ------------------------------
T ss_pred ccccCccchhhhhHHhhccHHHHHHHHHHH
Confidence 999888888888887777766665555543
No 255
>KOG4332|consensus
Probab=96.60 E-value=0.005 Score=56.72 Aligned_cols=162 Identities=12% Similarity=-0.032 Sum_probs=88.5
Q ss_pred HHHhhCCCCC-hHHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHHHHHHHHHhhcccCCCCChhHHHHHH
Q psy15864 262 IFESIHAPLD-PYFATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAACFIVVAVYAQFHLSYGWDSPLVPTVFLV 340 (553)
Q Consensus 262 ~~~~~g~~~~-~~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (553)
+++.+|+... .....+......++...+.|-++|+.|||+..+..++...++++.-- ++...++++++.
T Consensus 63 LYstYgFgkG~IgqLfiaGfgSsmLFGtivgSLaDkqGRKracvtycitYiLsCiTKh----------SpqYkVLmVGR~ 132 (454)
T KOG4332|consen 63 LYSTYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCITYILSCITKH----------SPQYKVLMVGRV 132 (454)
T ss_pred eehhcCccCCccceeeecccchHHHHHHHHHHHHhhhccccceeeehHHHHHHHHhhc----------CCceEEEeehhh
Confidence 3444555432 22222222233444556667899999999987777666655554321 556677888999
Q ss_pred HHHHHHhhhhccccceeecccc-----ccchhhhhhhHHH-HHHHHHHHHHHHHhHHHHhhcc--chhhHHHHHHHHHHH
Q psy15864 341 LAAFLTHICIRLLPWMLIGEVF-----PNNIRATASGASG-SSSYIFAFAVNKLYYPMLDTFH--LWGTLYFYAAISVVG 412 (553)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~e~~-----p~~~Rg~~~~~~~-~~~~~~~~i~~~~~~~~~~~~g--~~~~~~~~~~~~~~~ 412 (553)
+.|+..+..+...-.=+++|.. |.+.-....+=.. +...+.+++++.....+.+.++ .-.+|-..+.+..+.
T Consensus 133 LGGiaTsLLFSaFEsWliaEHnekr~FeqqWls~TFskA~ffgNglvAiiaGlfgn~lvd~~slGPVAPFdAAacfLaig 212 (454)
T KOG4332|consen 133 LGGIATSLLFSAFESWLIAEHNEKRGFEQQWLSVTFSKAVFFGNGLVAIIAGLFGNLLVDTFSLGPVAPFDAAACFLAIG 212 (454)
T ss_pred hhhHHHHHHHHHHHHHHHHHhhhccCChHhhhhHHHHHHHHhhccHHHHHHHHHHHHHHHHhccCCCCchHHHHHHHHHH
Confidence 9888877766555433556653 3333222222222 3344555666655556666554 333444444444444
Q ss_pred HhhheEEcccCCCCChHHHHH
Q psy15864 413 TLYMYFVMPETEGRTLRDIEE 433 (553)
Q Consensus 413 ~~~~~~~~pet~~~~~~~~~~ 433 (553)
..+++--.-|..+++.+..+-
T Consensus 213 mAvil~~W~ENygdps~~kdl 233 (454)
T KOG4332|consen 213 MAVILSSWSENYGDPSENKDL 233 (454)
T ss_pred HHHHHhhhhhccCChhhhHHH
Confidence 444444456666665554443
No 256
>KOG3626|consensus
Probab=96.58 E-value=0.022 Score=60.79 Aligned_cols=188 Identities=11% Similarity=-0.065 Sum_probs=108.2
Q ss_pred HHHHHHHHHhhhhhHHHHhhHHHHHHhhCCCCCh-HHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHHHH
Q psy15864 239 IVTSLFFIGQFGGMTTLQTYAVGIFESIHAPLDP-YFATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAACFIVV 317 (553)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~ 317 (553)
++..+..+.+......+......+-...+++... .++...+-++..+..++..+..-|.-|-+.+-+++++++++.++.
T Consensus 100 ~~l~~~~~~q~l~~~y~~s~IttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~lgsll~ 179 (735)
T KOG3626|consen 100 VLLSLAAFAQGLYVGYFNSVITTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGLGSLLF 179 (735)
T ss_pred HHHHHHHHHHHhhhhhhhhhhhhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhccccCccceeeechhHHHHHHHHH
Confidence 3333334444333344444444444556665433 355556668888888888899999999999999999999999988
Q ss_pred HHHHHhhc-------------ccC----------------------C----CCC---h-hHHHHHHHHHHHHhhhhcccc
Q psy15864 318 AVYAQFHL-------------SYG----------------------W----DSP---L-VPTVFLVLAAFLTHICIRLLP 354 (553)
Q Consensus 318 ~~~~~~~~-------------~~~----------------------~----~~~---~-~~~~~~~~~~~~~~~~~~~~~ 354 (553)
++.-.+.. ..+ . .+. + +++++.++.|++. ....++.
T Consensus 180 alPHf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~-Tpi~tlG 258 (735)
T KOG3626|consen 180 ALPHFFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGA-TPIFTLG 258 (735)
T ss_pred hChHHhcCcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCC-CCCccCC
Confidence 76422110 000 0 111 1 1222233333332 2223445
Q ss_pred ceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhHHHHhh------------------ccchhhHHHHHHHHHHHHhhh
Q psy15864 355 WMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYYPMLDT------------------FHLWGTLYFYAAISVVGTLYM 416 (553)
Q Consensus 355 ~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~~------------------~g~~~~~~~~~~~~~~~~~~~ 416 (553)
.+|+=|....+.-....|+.+++..+|-+++-.+++.+... .|-||.-+++++...+...+.
T Consensus 259 isYiDDnvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~a~p 338 (735)
T KOG3626|consen 259 ISYIDDNVKKKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLFSAVP 338 (735)
T ss_pred CccccccccccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHH
Confidence 58888888888777888888877777766666555554321 233444444444444444455
Q ss_pred eEEcccCCCCC
Q psy15864 417 YFVMPETEGRT 427 (553)
Q Consensus 417 ~~~~pet~~~~ 427 (553)
++++|.+..+.
T Consensus 339 ~f~fPk~lp~~ 349 (735)
T KOG3626|consen 339 LFFFPKELPKS 349 (735)
T ss_pred HHhCcccCccc
Confidence 56677664443
No 257
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=96.49 E-value=0.04 Score=56.72 Aligned_cols=109 Identities=12% Similarity=0.025 Sum_probs=72.7
Q ss_pred HHHHHHhhhhcccCCcceeecchhHHHHHHHHHHHHHHhhcccCC------------C----------CChhHHHHHHHH
Q psy15864 285 GGALLCVVLIHYTGKRPLALISTGGSAACFIVVAVYAQFHLSYGW------------D----------SPLVPTVFLVLA 342 (553)
Q Consensus 285 ~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~------------~----------~~~~~~~~~~~~ 342 (553)
+..++.+++++|++|++++.+....+++..+++++........-. + ..|...++....
T Consensus 59 ~~~~ly~~l~~~~~~~~lf~~~~~~F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~ 138 (472)
T TIGR00769 59 IFMLIYTKLSNILSKEALFYTVISPFLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFMGFIAILRIWSFALFYVMA 138 (472)
T ss_pred HHHHHHHHHHhcCCHHHhHHHHHHHHHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhHHHHHHHhhhhHHHHHHHH
Confidence 337788999999999998887777776666666655321110000 0 122222222233
Q ss_pred HHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhHHHH
Q psy15864 343 AFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYYPML 393 (553)
Q Consensus 343 ~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~ 393 (553)
........+.+.|.+++|++..+.-.+..++....++++.++++.+..++.
T Consensus 139 elw~~~vvS~lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~~~~~ 189 (472)
T TIGR00769 139 ELWGSVVLSLLFWGFANQITTIDEAKRFYALFGLGANVALIFSGRTIKYFS 189 (472)
T ss_pred HHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333333333366899999999999999999999999999999998887765
No 258
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=96.29 E-value=0.036 Score=55.52 Aligned_cols=131 Identities=13% Similarity=0.112 Sum_probs=81.9
Q ss_pred HHHHHHHHHhhhhcccCCcceeecchhHHHHHHHHHHHHHHhhcccCCCCChhHHHHHHHHHHHHhhhhccccceeeccc
Q psy15864 282 AELGGALLCVVLIHYTGKRPLALISTGGSAACFIVVAVYAQFHLSYGWDSPLVPTVFLVLAAFLTHICIRLLPWMLIGEV 361 (553)
Q Consensus 282 ~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 361 (553)
..++..++...+.|.+|-|++++++.+..++.++++.+ ..+.+.+.+.-++.|.+.+.-. .-++|+--.
T Consensus 53 Syl~~l~~vflltd~l~Ykpviil~~~~~i~t~~lll~---------~~sv~~mq~~q~~yg~~~a~ev--ay~sYiys~ 121 (412)
T PF01770_consen 53 SYLAFLLPVFLLTDYLRYKPVIILQALSYIITWLLLLF---------GTSVLAMQLMQFFYGLATAAEV--AYYSYIYSV 121 (412)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHH---------HCcHHHHHHHHHHHHHHHHHHH--HHHHHheee
Confidence 34556677788999999999999998888888877766 5666777777777776554432 223555566
Q ss_pred cccchhhhhhhHHHHHHHHHHHHHHHHhHHHHhhcc-chhhHHHHHHHHHHHHhhheEEcccC
Q psy15864 362 FPNNIRATASGASGSSSYIFAFAVNKLYYPMLDTFH-LWGTLYFYAAISVVGTLYMYFVMPET 423 (553)
Q Consensus 362 ~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~pet 423 (553)
.|++.--.+.+.......+|.+++..++-.++...+ .+.....+......++++..+++|..
T Consensus 122 v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~~sy~~L~~isl~~~~~a~~~~~fLP~~ 184 (412)
T PF01770_consen 122 VDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFGGVSYFQLNYISLASVSLALLIALFLPMP 184 (412)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 677666677777766666666666655554443222 22233333334344444444566654
No 259
>KOG4686|consensus
Probab=96.07 E-value=0.00032 Score=64.90 Aligned_cols=116 Identities=11% Similarity=-0.141 Sum_probs=86.8
Q ss_pred HHHHHHHHHHHHHHHHHhhhhcc-cCCcceeecchhHHHHHHHHHHHHHHhhcccCCCCChhHHHHHHHHHHHHhhhhcc
Q psy15864 274 FATLLLGVAELGGALLCVVLIHY-TGKRPLALISTGGSAACFIVVAVYAQFHLSYGWDSPLVPTVFLVLAAFLTHICIRL 352 (553)
Q Consensus 274 ~~~~~~~i~~~~g~~~~g~l~dr-~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (553)
+..++++...++-++++|++.|| +|-|...++.+++..++.++++.... .+..|.+..+++++|++. -....
T Consensus 83 LlYsvYSwPNvVlcffgGflidr~fgir~gtii~~~fv~~GqliFa~Ggi------~~aFw~M~~GRF~FGIGg-ESlAV 155 (459)
T KOG4686|consen 83 LLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILCIFVFLGQLIFAAGGI------SHAFWTMLAGRFLFGIGG-ESLAV 155 (459)
T ss_pred eeeeeccCCCEEEeeecceeehhhhhhhHHHHHHHHHHHHHHHHHHhchH------HHHHHHHHhhheeeccCc-hhhhh
Confidence 45566777788889999999997 67777666666666777777665333 456788899999999865 34445
Q ss_pred ccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhHHHHhhc
Q psy15864 353 LPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYYPMLDTF 396 (553)
Q Consensus 353 ~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 396 (553)
....|+.-.+.-+.-+.++|+...+.++|+.+--.+.+++.+..
T Consensus 156 aQN~yav~wFKGKELn~vfGlqlSvAR~GstvNf~lm~~ly~~~ 199 (459)
T KOG4686|consen 156 AQNKYAVYWFKGKELNFVFGLQLSVARLGSTVNFLLMPFLYDTM 199 (459)
T ss_pred hhcceeEEEecCccccchhhHHHHHHHhhceeeeeecHHHHHHH
Confidence 55688888888888899999999999998877666666666543
No 260
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=95.99 E-value=0.5 Score=48.81 Aligned_cols=37 Identities=8% Similarity=-0.033 Sum_probs=33.0
Q ss_pred hhhhhccCcccccchhchhhhhHHHHHHHHHhhcccc
Q psy15864 105 TYVAEITQPHLRGMLSATASMTTIFGTVSQLFLGSFL 141 (553)
Q Consensus 105 ~~i~e~~p~~~Rg~~~~~~~~~~~lG~~l~~~l~~~l 141 (553)
+++.|.++.++-.|..+++.++.++|.++++.+..++
T Consensus 152 ~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~~~~ 188 (472)
T TIGR00769 152 GFANQITTIDEAKRFYALFGLGANVALIFSGRTIKYF 188 (472)
T ss_pred HHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6789999999999999999999999999998775553
No 261
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=95.91 E-value=0.012 Score=59.47 Aligned_cols=116 Identities=9% Similarity=-0.154 Sum_probs=74.7
Q ss_pred eeecchhHHHHHHHHHHHHHHhhcccCCCCChhHHHHHHHHHHHHhhhhccccceeeccccccc---hhhhhhhHHHHHH
Q psy15864 302 LALISTGGSAACFIVVAVYAQFHLSYGWDSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNN---IRATASGASGSSS 378 (553)
Q Consensus 302 ~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~---~Rg~~~~~~~~~~ 378 (553)
+++++.++.++|.+++.+...............+++++.+.+++.|+.=..+. ++.+|.++++ .|..+....+...
T Consensus 3 tI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~-~~~~dq~~~~~~~~~~~~F~~fY~~i 81 (372)
T PF00854_consen 3 TILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNIS-PFGADQYDEDDDSRRDSFFNWFYWGI 81 (372)
T ss_dssp HHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHH-HHHHHCSSTTTTTHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHH-HHHHHHhcccchhhhhhhHHHHHHHH
Confidence 44566777777777755543211111122345677777777777766655554 8889998765 4566677888889
Q ss_pred HHHHHHHHHHhHHHHhhccchhhHHHHHHHHHHHHhhheE
Q psy15864 379 YIFAFAVNKLYYPMLDTFHLWGTLYFYAAISVVGTLYMYF 418 (553)
Q Consensus 379 ~~~~~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 418 (553)
++|+.++..+.+++.+..+|+..|.+.++..+++.++.+.
T Consensus 82 n~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~~ 121 (372)
T PF00854_consen 82 NIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFLS 121 (372)
T ss_dssp HHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHHC
T ss_pred hhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHHh
Confidence 9999999999999988888877777766666555554433
No 262
>KOG3098|consensus
Probab=95.88 E-value=0.044 Score=55.87 Aligned_cols=107 Identities=7% Similarity=-0.041 Sum_probs=87.1
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHHHHHHHHHhhcccCCCCChhHHHHHHHHHHHHhhhhcc
Q psy15864 273 YFATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAACFIVVAVYAQFHLSYGWDSPLVPTVFLVLAAFLTHICIRL 352 (553)
Q Consensus 273 ~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (553)
+....+......+.+++++.+.|++|.|+.+.++.....+..+.+.. .+.+..++...+.|++.+..|..
T Consensus 53 y~~~aiiY~~ftv~~l~~psiv~~i~~K~~lv~ga~~y~~f~~gfl~----------~N~y~~yfssallG~Gaallw~G 122 (461)
T KOG3098|consen 53 YYGQAIIYAFFTVSCLFAPSIVNFLGPKWALVIGATCYAAFPLGFLF----------PNSYYLYFSSALLGFGAALLWTG 122 (461)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHhhHHHHHHHHhHHHHHHHHHHHh----------cchHHHHHHHHHhhhhHHheecc
Confidence 45567788888999999999999999999999888777666655543 46788889999999998877776
Q ss_pred ccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhH
Q psy15864 353 LPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYY 390 (553)
Q Consensus 353 ~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~ 390 (553)
-. .|++|..+++.+.+-.++..++.....++|+.+..
T Consensus 123 qG-~ylt~~st~~tie~Nisi~Wai~~~~li~Ggi~l~ 159 (461)
T KOG3098|consen 123 QG-GYLTSNSTRETIERNISIFWAIGQSSLIIGGIILF 159 (461)
T ss_pred cc-eehhhcCChhhHHHHHHHHHHHHHHHHHhhhHhhe
Confidence 65 99999999999999999888888777777655443
No 263
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=95.64 E-value=0.097 Score=52.05 Aligned_cols=103 Identities=14% Similarity=0.063 Sum_probs=60.4
Q ss_pred HHHHHHHHHHHHHhhhhcccCCcceeecchhHHH-HHHHHHHHHHHhhcccCCCCChhHH-HHHHHHHHHHhhhhccccc
Q psy15864 278 LLGVAELGGALLCVVLIHYTGKRPLALISTGGSA-ACFIVVAVYAQFHLSYGWDSPLVPT-VFLVLAAFLTHICIRLLPW 355 (553)
Q Consensus 278 ~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~-i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 355 (553)
+.++...+-+++-|-++|+.|+|+..+..+.... ++.+++.+.+ ..+.+... ++..+..+++..+ .....
T Consensus 66 ia~llia~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~~~~L~~i~-------~~s~~~~~l~~~il~~i~~~~s-~Vfyd 137 (438)
T COG2270 66 IAGLLIALLAPILGTIADYPGPRKKFFGFFTAIGIISTFLLWFIP-------PGSYLLLLLLFLILASIGFEFS-NVFYD 137 (438)
T ss_pred HHHHHHHHHHHHhhhhhccCCCcchHHHHHHHHHHHHHHHHHHhC-------CCchHHHHHHHHHHHHHhcchh-heehh
Confidence 4445555566777889999998776655444333 3333333321 21334333 3333444433333 23334
Q ss_pred eeeccccccchhhhhhhHHHHHHHHHHHHHHHH
Q psy15864 356 MLIGEVFPNNIRATASGASGSSSYIFAFAVNKL 388 (553)
Q Consensus 356 ~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~ 388 (553)
+++.++.+++.-++..++....+++++.+.-.+
T Consensus 138 s~L~~~~~k~~~~riS~lg~~~gylgs~i~li~ 170 (438)
T COG2270 138 SMLPRLTTKDNMGRISGLGWALGYLGSVILLIF 170 (438)
T ss_pred hHhhhhcCccccCcccccccccccccchHHHHH
Confidence 778888888777888888888888877665444
No 264
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=95.60 E-value=0.026 Score=42.69 Aligned_cols=69 Identities=16% Similarity=-0.022 Sum_probs=55.4
Q ss_pred hhHHHHhhHHHHHHhhCCCCC-hHHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHHHHHH
Q psy15864 251 GMTTLQTYAVGIFESIHAPLD-PYFATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAACFIVVAV 319 (553)
Q Consensus 251 ~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~ 319 (553)
+-+.+...+|...++.+++.+ ..+..+...+|.++|++.+.++.++..++..+..+.+...+..+.+++
T Consensus 7 gRFayTplLP~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~ 76 (85)
T PF06779_consen 7 GRFAYTPLLPLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMAL 76 (85)
T ss_pred HHHHHHhHhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHH
Confidence 344555678888888887754 458888999999999999999999877788888888888877777776
No 265
>PRK03612 spermidine synthase; Provisional
Probab=95.54 E-value=0.063 Score=56.45 Aligned_cols=49 Identities=12% Similarity=0.120 Sum_probs=33.7
Q ss_pred hhhhhHHHHHHHHHHHHHHHHhHHHHh-hccchhhHHHHHHHHHHHHhhh
Q psy15864 368 ATASGASGSSSYIFAFAVNKLYYPMLD-TFHLWGTLYFYAAISVVGTLYM 416 (553)
Q Consensus 368 g~~~~~~~~~~~~~~~i~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~ 416 (553)
|...|-.++...+|+++++++.+.++- ..|.....++++++.++++++.
T Consensus 144 g~~~g~ly~~ntlGa~~G~l~~~~vLlp~lG~~~t~~~~a~l~~~~a~~~ 193 (521)
T PRK03612 144 GHNVATVLAADYLGALVGGLAFPFLLLPRLGLIRTAALTGSLNLLAALVF 193 (521)
T ss_pred hhhhhhhHhHHhHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHH
Confidence 456777788888999999888887654 5666656666666555555433
No 266
>KOG0637|consensus
Probab=95.46 E-value=0.01 Score=59.22 Aligned_cols=151 Identities=14% Similarity=0.008 Sum_probs=86.8
Q ss_pred HHHHHHHHHHHhhhhhHHHHhhHHHHHHhhCCCCCh-HHHHHHHHHHHHHHHHHHhhhhcc----cCCcceeecc-hhHH
Q psy15864 237 YAIVTSLFFIGQFGGMTTLQTYAVGIFESIHAPLDP-YFATLLLGVAELGGALLCVVLIHY----TGKRPLALIS-TGGS 310 (553)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~i~~~~g~~~~g~l~dr----~Grr~~l~~~-~~~~ 310 (553)
++....+.+..++ ++..-..|++.+++..|.+... +......-+.+++..++.|..+|| +|||+..+.. ....
T Consensus 34 li~v~~ia~Gvqf-~wA~elsy~tPyl~~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~i 112 (498)
T KOG0637|consen 34 LISVASIAAGVQF-GWALELSYLTPYLQSLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSLLI 112 (498)
T ss_pred HHHHHHHHHHHHH-HHHHHhccccHHHHHcCCCcccccccccccccccceecccccccccccccccccccchHHHhhHHH
Confidence 3333334344444 3455556777777888876433 233344456677788889999997 6887776554 4444
Q ss_pred HHHHHHHHHHHHhhc---ccCCC-----CChhHHHHHHHHHHHHhhhhccccceeeccccccchhhh-hhhHHHHHHHHH
Q psy15864 311 AACFIVVAVYAQFHL---SYGWD-----SPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRAT-ASGASGSSSYIF 381 (553)
Q Consensus 311 ~i~~~~~~~~~~~~~---~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~-~~~~~~~~~~~~ 381 (553)
.++.+++.+...... .+... .....+++..+.-++.....+|.= ++++|++....+.+ +.+...++..+|
T Consensus 113 ~~~l~Lig~aaDig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~r-a~L~Dl~~~d~~~~~Ans~f~~f~avG 191 (498)
T KOG0637|consen 113 AVSLFLIGYAADIGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCR-ALLADLARGDAKKTRANSVFSFFMAVG 191 (498)
T ss_pred HHHHhhhhhHhhhhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHH-HHHHHhccChhhhhccchhHHHHHHhc
Confidence 455555444332211 11111 111233334444445545556664 88899987776666 888887777777
Q ss_pred HHHHHHHh
Q psy15864 382 AFAVNKLY 389 (553)
Q Consensus 382 ~~i~~~~~ 389 (553)
+.++-.+.
T Consensus 192 nvLGY~~g 199 (498)
T KOG0637|consen 192 NVLGYALG 199 (498)
T ss_pred ceeeeecc
Confidence 77664433
No 267
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=95.01 E-value=1.2 Score=45.35 Aligned_cols=66 Identities=14% Similarity=0.167 Sum_probs=46.4
Q ss_pred hhhhhccCcccccchhchhhhhHHHHHHHHHhhcccc-c-------------hHHHHHHHHHHHHHHHHHhcc----ccC
Q psy15864 105 TYVAEITQPHLRGMLSATASMTTIFGTVSQLFLGSFL-H-------------WRSAAILNLLFPILALCALYF----IPE 166 (553)
Q Consensus 105 ~~i~e~~p~~~Rg~~~~~~~~~~~lG~~l~~~l~~~l-g-------------Wr~~f~i~~i~~li~~i~~~~----lpE 166 (553)
....|.+..++-.|..++++++.+++.++++.+..++ . -+..+.+.++.+++++++.++ +++
T Consensus 171 ~faNeitt~~eakRFy~lf~l~~ni~lllsg~~~~~~~k~~~~~~~~~~~~~~~~~~~vi~~~~~i~~~l~~~~~r~il~ 250 (509)
T COG3202 171 QFANEITTIEEAKRFYPLFGLGANISLLLSGEVTSWLSKHRDALASEFKDLLLQILFIVIVILGIIAILLYRYINRNVLT 250 (509)
T ss_pred HHHHHhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhhchhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 4567888899999999999999999999988877665 2 344455555555555544443 345
Q ss_pred Ccee
Q psy15864 167 SPHW 170 (553)
Q Consensus 167 sp~~ 170 (553)
.|++
T Consensus 251 ~~~f 254 (509)
T COG3202 251 DPLF 254 (509)
T ss_pred Ccch
Confidence 5544
No 268
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=94.79 E-value=0.058 Score=52.87 Aligned_cols=63 Identities=8% Similarity=-0.179 Sum_probs=51.4
Q ss_pred CChhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhHHHHh
Q psy15864 331 SPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYYPMLD 394 (553)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~ 394 (553)
+.+.+++..++.+.+.+..-... ..|++++.|++.+++.+++.+.+..+|.+++|.+.+.++.
T Consensus 9 ~~~~~l~~~f~~g~G~~~lq~~~-n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~ 71 (310)
T TIGR01272 9 YYVLFLGALFVLASGLTILQVAA-NPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLIL 71 (310)
T ss_pred HHHHHHHHHHHHHhhHHHHHhhH-HHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHHh
Confidence 44566677777777776555444 6999999999999999999999999999999999998773
No 269
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=94.49 E-value=0.2 Score=50.47 Aligned_cols=64 Identities=13% Similarity=0.035 Sum_probs=50.2
Q ss_pred chhhhhhhhhccCcc---cccchhchhhhhHHHHHHHHHhhcccc----chHHHHHHHHHHHHHHHHHhcc
Q psy15864 100 LVLVLTYVAEITQPH---LRGMLSATASMTTIFGTVSQLFLGSFL----HWRSAAILNLLFPILALCALYF 163 (553)
Q Consensus 100 ~~~~~~~i~e~~p~~---~Rg~~~~~~~~~~~lG~~l~~~l~~~l----gWr~~f~i~~i~~li~~i~~~~ 163 (553)
=+.+.++++|.++++ +|.....++..+.++|.+++..+..++ ||.+.|++.++..+++++..+.
T Consensus 51 K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~in~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~~ 121 (372)
T PF00854_consen 51 KPNISPFGADQYDEDDDSRRDSFFNWFYWGINIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFLS 121 (372)
T ss_dssp HHHHHHHHHHCSSTTTTTHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHHC
T ss_pred cccHHHHHHHHhcccchhhhhhhHHHHHHHHhhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHHh
Confidence 356678899999765 456677788999999999999888877 8999999988887777655443
No 270
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=94.15 E-value=1.9 Score=44.95 Aligned_cols=37 Identities=16% Similarity=0.137 Sum_probs=31.5
Q ss_pred hhhhhccCcccccchhchhhhhHHHHHHHHHhhcccc
Q psy15864 105 TYVAEITQPHLRGMLSATASMTTIFGTVSQLFLGSFL 141 (553)
Q Consensus 105 ~~i~e~~p~~~Rg~~~~~~~~~~~lG~~l~~~l~~~l 141 (553)
.+..|.++.++-.+..+++.++.++|.++++.+...+
T Consensus 167 ~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~ 203 (491)
T PF03219_consen 167 GFANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYF 203 (491)
T ss_pred HHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6678999999999999999999999999887665443
No 271
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=94.07 E-value=0.68 Score=47.62 Aligned_cols=55 Identities=11% Similarity=-0.076 Sum_probs=36.9
Q ss_pred CChhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHHHHH
Q psy15864 331 SPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVN 386 (553)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~ 386 (553)
+.+..++..+++++..|.... +...+..+..+++.|..+..++..+..+|-.+|+
T Consensus 371 ~d~~~~~~~~l~gltnGy~~s-~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs 425 (437)
T TIGR00939 371 GDAYFIILMLLFGFSNGYLGS-LSMCLAPRQVDPHEREVAGALMVIFLLVGLALGA 425 (437)
T ss_pred ccHHHHHHHHHHHHhhhHHHH-HHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455566677777777655544 4458888888888888777666666555555544
No 272
>KOG3574|consensus
Probab=94.01 E-value=0.78 Score=45.10 Aligned_cols=44 Identities=9% Similarity=-0.068 Sum_probs=36.7
Q ss_pred ceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhHHHHhhccc
Q psy15864 355 WMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYYPMLDTFHL 398 (553)
Q Consensus 355 ~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~~~g~ 398 (553)
.++.+.+.+|..-|+.+.+.++..++|+.+-..+...+.+..++
T Consensus 391 maf~aqisdp~iggTymTlLNTLsnLGg~wp~tv~l~l~D~ltv 434 (510)
T KOG3574|consen 391 MAFHAQISDPAIGGTYMTLLNTLSNLGGNWPGTVALWLADGLTV 434 (510)
T ss_pred HHHHhhcCCcccCccHHHHHHHHHHhcCCcHHHHHHHhcccCce
Confidence 37888999999999999999999999988877777777665543
No 273
>KOG1237|consensus
Probab=93.44 E-value=0.74 Score=48.93 Aligned_cols=140 Identities=14% Similarity=-0.048 Sum_probs=78.4
Q ss_pred HHHHHHHHHHHHHHHHHhhhhcc-cCCcceeecchhHHHHHHHHHHHHHHhhcccC-----------CC--CC---hhHH
Q psy15864 274 FATLLLGVAELGGALLCVVLIHY-TGKRPLALISTGGSAACFIVVAVYAQFHLSYG-----------WD--SP---LVPT 336 (553)
Q Consensus 274 ~~~~~~~i~~~~g~~~~g~l~dr-~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~-----------~~--~~---~~~~ 336 (553)
..............+++++++|- +||-+++.++.++..++.+++.+........+ .. +. ..++
T Consensus 77 ~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~~~~~~~~~c~~~s~~q~~~~~ 156 (571)
T KOG1237|consen 77 NNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLPFMCKFKPGGNVCESPSKLQLAVLY 156 (571)
T ss_pred HHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccCCCCCCcccCcchHHHHHHH
Confidence 34445555566777889999996 58888888888888888766655443321100 01 11 1222
Q ss_pred HHHHHHHHHHhhhhccccceeeccccc---cc-hhh--hhhhHHHHHHHHHHHHHHHHhHHHHhhccchhhHHHHHHHHH
Q psy15864 337 VFLVLAAFLTHICIRLLPWMLIGEVFP---NN-IRA--TASGASGSSSYIFAFAVNKLYYPMLDTFHLWGTLYFYAAISV 410 (553)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~e~~p---~~-~Rg--~~~~~~~~~~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~~~~ 410 (553)
..+.+..++.| +.-+....+-+|-++ +. .+. ..+...++..+++..++-.+..+..+..+|...+.+.+++.+
T Consensus 157 ~~l~lia~G~g-g~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~vyiq~~~~w~lgf~i~~~~~~ 235 (571)
T KOG1237|consen 157 GALYLIALGAG-GIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQTVLVYIQDNVGWKLGFGIPTVLNA 235 (571)
T ss_pred HHHHHheeccC-CCCCcchhhcccccCccCcchhhCcccchhHHHHHHHHHHHHHHHHHHhhhhcccceeeccHHHHHHH
Confidence 22223322332 222333478888887 22 222 344555555667777666666666667776666655555444
Q ss_pred HHHh
Q psy15864 411 VGTL 414 (553)
Q Consensus 411 ~~~~ 414 (553)
++.+
T Consensus 236 lai~ 239 (571)
T KOG1237|consen 236 LAIL 239 (571)
T ss_pred HHHH
Confidence 4443
No 274
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=93.23 E-value=0.02 Score=56.06 Aligned_cols=110 Identities=13% Similarity=-0.018 Sum_probs=1.9
Q ss_pred HHHHHHHHHHHHHHHHhhhhccc-CCcceeecchhHHHHHHHHHHHHHHhhc----ccCCCCChhHHHHHHHHHHHHhhh
Q psy15864 275 ATLLLGVAELGGALLCVVLIHYT-GKRPLALISTGGSAACFIVVAVYAQFHL----SYGWDSPLVPTVFLVLAAFLTHIC 349 (553)
Q Consensus 275 ~~~~~~i~~~~g~~~~g~l~dr~-Grr~~l~~~~~~~~i~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 349 (553)
..+++.++-++|..++++..-+. .+|.+.+ ..+.=.+...++.+...... ...-.+-+..++..+++++..|..
T Consensus 187 ~fl~Fn~gD~iGR~l~~~~~~~~~~~~~l~~-~s~~R~~fiPlf~~cn~~p~~~~~~~~~~~d~~~~i~~~l~g~TNGyl 265 (309)
T PF01733_consen 187 LFLLFNLGDFIGRFLASWPRWPGPSPRWLWI-LSLLRFLFIPLFLLCNVQPRPRYLPVLFNSDAWFIILMLLFGFTNGYL 265 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHhcchhcceeEecccccccHHH-HHHHHHHHHHHHHHHHhhcccccCCCcccchHHHHHHHHHHHHccchh
Confidence 34467788889988887643211 2343333 22221111111111100000 000123345555666777666544
Q ss_pred hccccceeeccccccchhhhhhhHHHHHHHHHHHHHH
Q psy15864 350 IRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVN 386 (553)
Q Consensus 350 ~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~ 386 (553)
. ++...+..+..+++.|..+..++.++..+|-.+|.
T Consensus 266 ~-tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs 301 (309)
T PF01733_consen 266 S-TLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGS 301 (309)
T ss_dssp --HHHH-------------------------------
T ss_pred h-hceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4 44458888888888887766665555554444443
No 275
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=92.34 E-value=2.5 Score=45.83 Aligned_cols=65 Identities=15% Similarity=0.122 Sum_probs=46.3
Q ss_pred cccchhhhhhhhhccCcc---cccchhchhhhhHHHHHHHHHhhcccc-----------chHHHHHHHHHHHHHHHHHh
Q psy15864 97 AAPLVLVLTYVAEITQPH---LRGMLSATASMTTIFGTVSQLFLGSFL-----------HWRSAAILNLLFPILALCAL 161 (553)
Q Consensus 97 ga~~~~~~~~i~e~~p~~---~Rg~~~~~~~~~~~lG~~l~~~l~~~l-----------gWr~~f~i~~i~~li~~i~~ 161 (553)
|+.-+...+...|.++++ +|-.+..++..+.++|+++++++..++ +|.+.|.+.++..++++++.
T Consensus 100 GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~i~~i~m~ia~lvf 178 (654)
T TIGR00926 100 GGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAFGVPAILMILALIVF 178 (654)
T ss_pred cccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHHHHHHHHHHHHH
Confidence 333456668888888754 356677777888888988887665433 49999999888877775544
No 276
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=92.27 E-value=4.2 Score=41.79 Aligned_cols=42 Identities=12% Similarity=-0.011 Sum_probs=33.2
Q ss_pred ceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhHHHHhhc
Q psy15864 355 WMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYYPMLDTF 396 (553)
Q Consensus 355 ~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 396 (553)
.++-+.+..|..-|+.+.+.+++.++||-+-..+.-.+++.+
T Consensus 427 ~AFharISDP~IGGTYMTLLNTvSNLGGtWP~~~vL~lVD~f 468 (544)
T PF13000_consen 427 MAFHARISDPAIGGTYMTLLNTVSNLGGTWPRTFVLWLVDYF 468 (544)
T ss_pred HHHHhhccCcccchHHHHHHHHHHhcCCCchHHHHHHHhhhc
Confidence 377788899999999999999999998877665555555543
No 277
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=91.93 E-value=1.1 Score=45.03 Aligned_cols=132 Identities=19% Similarity=0.130 Sum_probs=70.9
Q ss_pred HHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHHHHHHHHHhhcccCCCCChhHHHHHHHHHHHHhhhhcccc
Q psy15864 275 ATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAACFIVVAVYAQFHLSYGWDSPLVPTVFLVLAAFLTHICIRLLP 354 (553)
Q Consensus 275 ~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (553)
+.+.-.+..++.-+++.++.+|+.-+.=.++..+++++++++.++ +.+.++-+++..+.+++.|.+-...
T Consensus 64 Vlladi~P~l~~Kl~aP~fi~~v~y~~Ri~~~~~l~~~g~l~va~---------~~~v~~~l~Gv~las~ssg~GE~tf- 133 (402)
T PF02487_consen 64 VLLADILPSLLVKLIAPFFIHRVPYWIRILICVALSAAGMLLVAF---------SPSVWVRLLGVVLASLSSGLGEVTF- 133 (402)
T ss_pred HHHHHHHHHHHHHHHhHhhhhhccchHHHHHHHHHHHHHHhheee---------ccchhHHHHHHHHHhhhhhhhHHHH-
Confidence 444455677777888899999876443344455566667666665 5667777777777777665554333
Q ss_pred ceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhHHHHhhcc--chhhHHHHHHHHHHHHhhheEEccc
Q psy15864 355 WMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYYPMLDTFH--LWGTLYFYAAISVVGTLYMYFVMPE 422 (553)
Q Consensus 355 ~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~~~g--~~~~~~~~~~~~~~~~~~~~~~~pe 422 (553)
.-.+..+++.. .+.....-..++.+++.....+.. .+ .+..+.+...++++..+..++.+|.
T Consensus 134 -L~lt~~y~~~~----l~~wssGTG~aGl~Ga~~y~~lT~-~g~s~~~tll~~~~lp~~~~~~~f~~L~~ 197 (402)
T PF02487_consen 134 -LSLTHFYGKSS----LSAWSSGTGGAGLVGALYYLGLTT-LGLSPRTTLLIMLVLPAIFLLSYFFLLPS 197 (402)
T ss_pred -HHHHHhcCccc----cccccCCcChhhHHHHHHHHHHHH-hCcCHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 22344555422 222222222334444443333333 33 2334555555554454444455553
No 278
>KOG4332|consensus
Probab=91.63 E-value=3.1 Score=38.92 Aligned_cols=97 Identities=15% Similarity=0.108 Sum_probs=54.5
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhcccCCc--ceeecchhHHHHHHHHHHHHHHhhcccCCCCChhHHHHHHHHHHHHhhhh
Q psy15864 273 YFATLLLGVAELGGALLCVVLIHYTGKR--PLALISTGGSAACFIVVAVYAQFHLSYGWDSPLVPTVFLVLAAFLTHICI 350 (553)
Q Consensus 273 ~~~~~~~~i~~~~g~~~~g~l~dr~Grr--~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (553)
..+...+.+..++|+-+..++..+-..| ..+.+.+++.++...+...... .+.+..+....+++.+++-.+.|..+
T Consensus 285 GfiFatFMlASmLGSSla~Rl~s~s~~~ve~ymqivf~vs~a~l~Lpilt~~--vsP~kes~~~s~i~F~~~E~cvGlfw 362 (454)
T KOG4332|consen 285 GFIFATFMLASMLGSSLASRLLSRSSPKVESYMQIVFLVSIAALLLPILTSS--VSPSKESPSESLIGFCLFEACVGLFW 362 (454)
T ss_pred hhHHHHHHHHHHHhhHHHHHHHhcCCcccchHHHHHHHHHHHHHHHHHHHhc--cCCCcCCchHHHHHHHHHHHHHhhcc
Confidence 3555666677778877776666553322 2333444443333333332221 22222344445667777777777777
Q ss_pred ccccceeeccccccchhhhhhh
Q psy15864 351 RLLPWMLIGEVFPNNIRATASG 372 (553)
Q Consensus 351 ~~~~~~~~~e~~p~~~Rg~~~~ 372 (553)
..+. -+-+...|.+.|++.+-
T Consensus 363 PSim-kmRsqyIPEearstimN 383 (454)
T KOG4332|consen 363 PSIM-KMRSQYIPEEARSTIMN 383 (454)
T ss_pred hHHH-HHHHhhCCHHHHhhhhh
Confidence 6554 55577789898887653
No 279
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=91.48 E-value=8.3 Score=39.48 Aligned_cols=146 Identities=8% Similarity=-0.017 Sum_probs=71.9
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHH----HHHHHHHHhhcccCCCCChhHH---HHHHHHHHH
Q psy15864 273 YFATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAACF----IVVAVYAQFHLSYGWDSPLVPT---VFLVLAAFL 345 (553)
Q Consensus 273 ~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~----~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 345 (553)
+...+.-.+..++.+...|...||..|.+....+.++.-++. +++......... ...+.+... +...+++..
T Consensus 41 siygl~~~~~~~~f~~~vG~~iD~~~Rl~~~~~~l~~Qn~sv~~s~~~~~~l~~~~~~-~~~~~~~~~~l~~~~~~~~~i 119 (432)
T PF06963_consen 41 SIYGLVRSLSAILFGPWVGRWIDRSPRLKVIRTSLVVQNLSVAASCALFLLLLSYPSS-SSQSSWLFIALFALLILLGAI 119 (432)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHhCCcchhhHHHHHHHHHHHHHHHHHHHHHHHhCCcc-ccccchHHHHHHHHHHHHHHH
Confidence 345555667777777888899999999887666654333222 222222211100 000122221 112222221
Q ss_pred Hhhhhccccce----eecccc--ccchhhhhhhHHHHHHHHHHHHHHHHhHHHHhhccchhhHHHHHHHHHHHHhhheEE
Q psy15864 346 THICIRLLPWM----LIGEVF--PNNIRATASGASGSSSYIFAFAVNKLYYPMLDTFHLWGTLYFYAAISVVGTLYMYFV 419 (553)
Q Consensus 346 ~~~~~~~~~~~----~~~e~~--p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 419 (553)
...+......+ ++.-+. .+.......+.+.-+=.+..+++|.+.|.++...+......++++..++..++=+++
T Consensus 120 ~~Las~~~~iavERDWVvvi~~~~~~~La~~NA~mRRIDL~ckllaPl~vG~l~t~~s~~~~~~~i~~~N~~S~~vEy~~ 199 (432)
T PF06963_consen 120 ERLASIANTIAVERDWVVVIAGGDPGALARMNATMRRIDLFCKLLAPLFVGLLMTFASPVIAAIFIAGWNLASVFVEYFL 199 (432)
T ss_pred HHHHHhhhhheeccchhhhhcCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHHHHHHHHHH
Confidence 11221111111 112222 222223333333333446788999999998887776666666666666665554443
No 280
>KOG1237|consensus
Probab=91.47 E-value=15 Score=39.26 Aligned_cols=64 Identities=11% Similarity=-0.116 Sum_probs=42.9
Q ss_pred CChhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhHHHHhh
Q psy15864 331 SPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYYPMLDT 395 (553)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~~ 395 (553)
+.++++--.++.|++-.+...+. .-+.-+-+|++.|+.++++......+|..++..+.......
T Consensus 457 Si~W~iPQyvLig~~Evf~~vg~-lEFfY~qaP~sMkS~~~al~l~t~a~G~~lss~Lv~~v~~~ 520 (571)
T KOG1237|consen 457 SILWQIPQYVLLGAGEVFTSVGG-LEFFYSQAPESMKSVATALWLLTVAVGNYLSSVLVSLVQFS 520 (571)
T ss_pred eHHHHHHHHHHHHHHHHHHhhhh-HHHhHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 34444444555555544443332 23444668999999999999999999999998888655433
No 281
>KOG3762|consensus
Probab=91.29 E-value=0.12 Score=52.90 Aligned_cols=68 Identities=16% Similarity=-0.019 Sum_probs=49.1
Q ss_pred HHHhhhhhHHHHhhHHHHHHhhCCCCChH-HHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHH
Q psy15864 245 FIGQFGGMTTLQTYAVGIFESIHAPLDPY-FATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAA 312 (553)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i 312 (553)
.+..+.....+...++.++.+.|++.... .+....-+..+++.+++|+++||+.+|+.++++..+..+
T Consensus 20 ~~~~~~~~g~l~pll~vy~kQLGl~p~~~Gtl~g~~P~v~~L~~P~~g~~Adr~r~~r~lllgsl~~~v 88 (618)
T KOG3762|consen 20 YLFFGARFGSLFPLLAVYFKQLGLNPAVVGTLTGTLPLVEFLAAPLWGFLADRYRKRRPLLLGSLLLSV 88 (618)
T ss_pred eeeeeecccccchHHHHHHHHcCCCHHHhhhhhhHHHHHHHHhHHHHHHHHHHHHhcCchhHHHHHHHH
Confidence 34445556667778888888889865443 555566688999999999999999887776665544433
No 282
>KOG1479|consensus
Probab=90.32 E-value=3.9 Score=41.02 Aligned_cols=60 Identities=17% Similarity=-0.041 Sum_probs=29.5
Q ss_pred HHHHHHHHHHHhhhhhHHHHhhHHHHHHhhCCCCChHHHHHHHHHHH----HHHHHHHhhhhcc
Q psy15864 237 YAIVTSLFFIGQFGGMTTLQTYAVGIFESIHAPLDPYFATLLLGVAE----LGGALLCVVLIHY 296 (553)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~----~~g~~~~g~l~dr 296 (553)
..+.+++..++....++.+..-.+++....-....+......+.+.+ ++..+.-.++.-|
T Consensus 19 v~~i~~llGiG~LlpWN~fiTa~~y~~~~~~~~~~~~~F~~~~~~~a~i~~ll~~~~n~~~~~~ 82 (406)
T KOG1479|consen 19 VYLIFLLLGIGTLLPWNMFITASDYYYYRFPGYHNSKNFTSSYTLAAQIPLLLFNLLNAFLNTR 82 (406)
T ss_pred HHHHHHHHhcccccchHhhhccHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34445555556666667777766766655433222333333333333 3344444445555
No 283
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=89.95 E-value=1.9 Score=41.83 Aligned_cols=88 Identities=16% Similarity=0.111 Sum_probs=45.0
Q ss_pred CCChhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhHHHH-hhccchhhHHHHHHH
Q psy15864 330 DSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYYPML-DTFHLWGTLYFYAAI 408 (553)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~-~~~g~~~~~~~~~~~ 408 (553)
.+.+++++..+++|...|.-. |+...+... -...-....+.....-++|+..++.+.+++. ...|..+..+..+.+
T Consensus 103 ~~~~Vly~lt~vIG~LVG~Ei-PL~mrml~~--r~a~~k~~~s~vl~~DYLGal~~gLl~p~lllP~LGl~rta~laG~~ 179 (508)
T COG4262 103 PSRLVLYALTAVIGVLVGAEI-PLLMRMLQR--RQAKAKDLGSRVLTLDYLGALAGGLLWPFLLLPRLGLVRTAALAGLC 179 (508)
T ss_pred hHHHHHHHHHHHHHHHHhcch-HHHHHHHHH--HHHHHHhhhhhhhhhHhhhhhhHHHHHHHHHhhhhccHHHHHHHHHH
Confidence 355666777777777665544 332233222 0011111222333447777777777777654 345555555555555
Q ss_pred HHHHHhhheEEc
Q psy15864 409 SVVGTLYMYFVM 420 (553)
Q Consensus 409 ~~~~~~~~~~~~ 420 (553)
..+++++..+.+
T Consensus 180 Nl~aAvv~~fll 191 (508)
T COG4262 180 NLAAAVVTLFLL 191 (508)
T ss_pred HHHHHHHHHHHH
Confidence 555554444433
No 284
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=88.61 E-value=4.4 Score=42.24 Aligned_cols=113 Identities=14% Similarity=0.035 Sum_probs=70.8
Q ss_pred HHHHHHHHHhhhhcccCCcceeecchhHHHHHHHHHHHHHHhhcc--cC------------CC--------CChhHHHHH
Q psy15864 282 AELGGALLCVVLIHYTGKRPLALISTGGSAACFIVVAVYAQFHLS--YG------------WD--------SPLVPTVFL 339 (553)
Q Consensus 282 ~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~--~~------------~~--------~~~~~~~~~ 339 (553)
++++..++..+++++++|.+++.+..+.+.+..+++++..+.... ++ .. +.|...+..
T Consensus 71 ~a~~f~~~y~kl~n~~s~~~lFy~~~~~F~~fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~~~i~~~~~Wt~slfY 150 (491)
T PF03219_consen 71 VAILFTILYSKLSNRLSREKLFYIIIIPFLGFFALFAFVLYPNRDILHPDAFADKLLAILPPGFKGFIAMFRNWTFSLFY 150 (491)
T ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhhchhhcCCCHHHHHhhhhccchHHHHHHHHHHHHHHHHH
Confidence 344556667889999999998777666666666666654321100 00 00 011111111
Q ss_pred HHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhHHHHh
Q psy15864 340 VLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYYPMLD 394 (553)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~ 394 (553)
+..-.........+-|.+++|+++.+.-.+..++....++++.++++.+..++..
T Consensus 151 v~aElwgsvvlSlLFW~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~ 205 (491)
T PF03219_consen 151 VMAELWGSVVLSLLFWGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSS 205 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2222222222333457899999999998999999999999999999888877766
No 285
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=88.24 E-value=6.1 Score=40.49 Aligned_cols=113 Identities=12% Similarity=0.061 Sum_probs=72.5
Q ss_pred HHHHHHHHHhhhhcccCCcceeecchhHHHHHHHHHHHHHHhhcc----c---------CCC-C---------ChhHHHH
Q psy15864 282 AELGGALLCVVLIHYTGKRPLALISTGGSAACFIVVAVYAQFHLS----Y---------GWD-S---------PLVPTVF 338 (553)
Q Consensus 282 ~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~----~---------~~~-~---------~~~~~~~ 338 (553)
++++..++..++++++.|.+++.+.+..+....+++++..+.... + ..+ . .|...+.
T Consensus 74 ~avif~~iy~kl~~~lt~~~vF~~~~~~F~~fF~LFa~Vi~P~~~~~hp~~~~~~~~~~~~p~~l~~~ili~~~Ws~s~~ 153 (509)
T COG3202 74 SAVIFTIIYQKLLNILTREKVFYIILGFFLGFFALFAFVIYPYKDILHPDPEFSRDLFADLPMFLKWFILIVGEWSYSLF 153 (509)
T ss_pred HHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCHHHHHHHHhhCCccceeeeEeecchHHHHH
Confidence 456677778889999999888877777777777777665441110 0 011 0 1222222
Q ss_pred HHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhHHHHh
Q psy15864 339 LVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYYPMLD 394 (553)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~ 394 (553)
..+.-........-+-|..+.|++..+.-.+..++.+...+++..+++.+..++..
T Consensus 154 Yi~aELWgslV~S~lFw~faNeitt~~eakRFy~lf~l~~ni~lllsg~~~~~~~k 209 (509)
T COG3202 154 YIMAELWGSLVLSLLFWQFANEITTIEEAKRFYPLFGLGANISLLLSGEVTSWLSK 209 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 22222222233333456788999999988999999999998888888877777654
No 286
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=87.62 E-value=3.7 Score=40.40 Aligned_cols=60 Identities=10% Similarity=-0.096 Sum_probs=37.0
Q ss_pred HHHHHHHHHHHHhhhhhHHHHhhHHHHHHhhCCCCChHHHHHHHHHHHHHHHHHHhhhhcc
Q psy15864 236 PYAIVTSLFFIGQFGGMTTLQTYAVGIFESIHAPLDPYFATLLLGVAELGGALLCVVLIHY 296 (553)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~g~~~~g~l~dr 296 (553)
+++.+..+........+.+...|.|.+- ..+-...-.++...+.+..++|+.+..++..+
T Consensus 245 ril~LG~~qslFE~smy~FVflWtPaL~-~~~~~~P~GlIFssFM~a~MlGS~lf~~l~s~ 304 (354)
T PF05631_consen 245 RILLLGLIQSLFEGSMYLFVFLWTPALD-PDDEELPLGLIFSSFMVAMMLGSSLFSRLLSK 304 (354)
T ss_pred hhHHHHHHHHHHHHHHHHheeeeeceec-CCCCCCCchHHHHHHHHHHHHHHHHHHHHHhC
Confidence 3445555555666666666667777764 21222334577777788889998888665543
No 287
>KOG3574|consensus
Probab=87.44 E-value=6.2 Score=39.09 Aligned_cols=60 Identities=10% Similarity=0.083 Sum_probs=31.5
Q ss_pred HHHHHhhhhhHHHHhhHHHHHHhhCCCCChHHHHHHHHHHHH--HHHHHHhhhhc-----ccCCcceeecc
Q psy15864 243 LFFIGQFGGMTTLQTYAVGIFESIHAPLDPYFATLLLGVAEL--GGALLCVVLIH-----YTGKRPLALIS 306 (553)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~--~g~~~~g~l~d-----r~Grr~~l~~~ 306 (553)
+.+..+...+.... ..|.+++..+.+-... .++.+..- .--+++.+++| |+|||+..++-
T Consensus 38 ~LYllQGiP~GL~~-~iP~lL~ak~vSyt~~---a~fS~ay~P~sLKllWaPiVDs~y~k~~GrrksWvvp 104 (510)
T KOG3574|consen 38 FLYLLQGIPLGLIG-AIPLLLQAKGVSYTSQ---AIFSFAYWPFSLKLLWAPIVDSVYSKRFGRRKSWVVP 104 (510)
T ss_pred HHHHHcCCchhHhh-hhHHHhcCCCcchhhh---hhhhhhhhHHHHHHHHHhhhHHHHHHhhccccceeee
Confidence 33445554444444 7787777555442211 11111111 12356667777 99999876654
No 288
>KOG1479|consensus
Probab=86.75 E-value=5.2 Score=40.10 Aligned_cols=110 Identities=15% Similarity=0.047 Sum_probs=55.4
Q ss_pred HHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHHHHHHHHHhhcccCCCCChhHHHHHHHHHHHHhhhhccccceee
Q psy15864 279 LGVAELGGALLCVVLIHYTGKRPLALISTGGSAACFIVVAVYAQFHLSYGWDSPLVPTVFLVLAAFLTHICIRLLPWMLI 358 (553)
Q Consensus 279 ~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (553)
+.+..++|.+.+.++-+. +||...+ ..++=.+..-++.+........--.+.++.++...++++..|-.. .+...+.
T Consensus 292 fN~~d~vG~~~a~~~~~~-~~r~l~i-~v~lR~lfiPlF~~cn~~~~~v~~~~~~~~~~l~~~lglsnGYlt-sl~m~~a 368 (406)
T KOG1479|consen 292 FNVFDLIGSILAALLTWP-DPRKLTI-PVLLRLLFIPLFLLCNYPPLPVVFESDGWFIFLMSLLGLSNGYLT-SLIMMYA 368 (406)
T ss_pred hHHHHHhhhhhhhcccCC-CCceehH-HHHHHHHHHHHHHHhccCCCCceecCchHHHHHHHHHHhccchHh-hheehhc
Confidence 667788886666665544 3443333 222222222222111000000002345566667777777665444 4556888
Q ss_pred ccccccchhhhhhhHHHHHHHHHHHHHHHHhHHH
Q psy15864 359 GEVFPNNIRATASGASGSSSYIFAFAVNKLYYPM 392 (553)
Q Consensus 359 ~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~ 392 (553)
...+|++.+-.+ |....+..++|+..+.+++++
T Consensus 369 Pk~v~~~e~e~a-G~~m~~fl~~Gl~~G~~~s~l 401 (406)
T KOG1479|consen 369 PKQVKPSEKEAA-GNLMVFFLVGGLALGSLLSWV 401 (406)
T ss_pred CCCCChHHHHHH-HHHHHHHHHHHHHHhhHHHHH
Confidence 888888886554 444444445555554444443
No 289
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=83.25 E-value=6.3 Score=40.57 Aligned_cols=31 Identities=23% Similarity=0.260 Sum_probs=15.0
Q ss_pred hHHHHHHHHHHHHhhhhccccceeeccccccch
Q psy15864 334 VPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNI 366 (553)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~ 366 (553)
..++..++.+++.+...+.+ +.+.+ .+|++.
T Consensus 108 ~~~~~v~~~g~~~~~~q~s~-~gla~-~fp~~~ 138 (437)
T TIGR00939 108 TTMASVVIINSGMALLQGSL-FGLAG-VFPSTY 138 (437)
T ss_pred HHHHHHHHHHhhhhhhcccc-hhhcc-cCCHHH
Confidence 33444445555544444333 35544 567654
No 290
>KOG3312|consensus
Probab=82.98 E-value=1.4 Score=36.33 Aligned_cols=7 Identities=43% Similarity=0.506 Sum_probs=2.6
Q ss_pred hhhhhHH
Q psy15864 29 KKKEKKA 35 (553)
Q Consensus 29 ~~~~~~~ 35 (553)
+|+.||.
T Consensus 44 dK~sKKL 50 (186)
T KOG3312|consen 44 DKQSKKL 50 (186)
T ss_pred HHHHHHH
Confidence 3333333
No 291
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=82.96 E-value=0.38 Score=44.35 Aligned_cols=18 Identities=0% Similarity=0.211 Sum_probs=0.0
Q ss_pred HHHHHHhhheEEcccCCC
Q psy15864 408 ISVVGTLYMYFVMPETEG 425 (553)
Q Consensus 408 ~~~~~~~~~~~~~pet~~ 425 (553)
+.+++++++|+++.+++.
T Consensus 173 L~LFlaiLIWlY~H~~~~ 190 (381)
T PF05297_consen 173 LLLFLAILIWLYVHDQRH 190 (381)
T ss_dssp ------------------
T ss_pred HHHHHHHHHHHHhcCCCC
Confidence 334455666777777764
No 292
>PRK10263 DNA translocase FtsK; Provisional
Probab=81.50 E-value=3.3 Score=47.46 Aligned_cols=20 Identities=25% Similarity=0.330 Sum_probs=11.8
Q ss_pred HHHHHHHHHHHHhhhhcccC
Q psy15864 279 LGVAELGGALLCVVLIHYTG 298 (553)
Q Consensus 279 ~~i~~~~g~~~~g~l~dr~G 298 (553)
...++.+|.+++..+..-+|
T Consensus 61 ~Nl~GiVGA~LAD~L~~LFG 80 (1355)
T PRK10263 61 HNLGGMPGAWLADTLFFIFG 80 (1355)
T ss_pred ccccchHHHHHHHHHHHHHh
Confidence 44556666666666555555
No 293
>COG1457 CodB Purine-cytosine permease and related proteins [Nucleotide transport and metabolism]
Probab=79.16 E-value=80 Score=32.37 Aligned_cols=31 Identities=13% Similarity=0.119 Sum_probs=20.2
Q ss_pred ChHHHHHHHHHHHHHHHHHHhhhhcccCCcc
Q psy15864 271 DPYFATLLLGVAELGGALLCVVLIHYTGKRP 301 (553)
Q Consensus 271 ~~~~~~~~~~i~~~~g~~~~g~l~dr~Grr~ 301 (553)
...+..++.++...+.++++-....++.|-.
T Consensus 129 ~~~~~ili~g~l~~l~~ifG~r~l~~l~~~a 159 (442)
T COG1457 129 PVWAGILIIGVLMTLVTIFGYRALHKLERIA 159 (442)
T ss_pred cHHHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 3445566666777777777777777766643
No 294
>KOG3880|consensus
Probab=75.86 E-value=2.3 Score=40.70 Aligned_cols=130 Identities=17% Similarity=0.148 Sum_probs=63.4
Q ss_pred HHHHHHHHHHHHHHHHhhhhccc--CCcceeecchhHHHHHHHHHHHHHHhhcccCCCCChhHHHHHHHHHHHHhhhhcc
Q psy15864 275 ATLLLGVAELGGALLCVVLIHYT--GKRPLALISTGGSAACFIVVAVYAQFHLSYGWDSPLVPTVFLVLAAFLTHICIRL 352 (553)
Q Consensus 275 ~~~~~~i~~~~g~~~~g~l~dr~--Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (553)
..+.-.+-.++.-+.+.++.||+ |.|.. +..++.+.+.++.++ +.+.++.+.+..+..++. +.+-
T Consensus 67 VLLaDilPsL~iKl~~Pff~~rfpf~~Ri~--~~v~~sa~s~~lVaf---------s~s~~~sL~GV~~aSiss--GlGE 133 (409)
T KOG3880|consen 67 VLLADILPSLAIKLTAPFFIHRFPFGFRIA--LVVLLSALSFFLVAF---------SNSVPMSLLGVVFASISS--GLGE 133 (409)
T ss_pred hhhhhhhHHHHHHHhchhhhhhcccchHHH--HHHHHHhcceEEEEe---------ccchhHHHhhhhhhhhcC--Ccce
Confidence 33444456667777788888875 34422 223334444444444 556666666666665544 4444
Q ss_pred ccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhHHHHh--hccchhhHHHHHHHHHHHHhhheEEcc
Q psy15864 353 LPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYYPMLD--TFHLWGTLYFYAAISVVGTLYMYFVMP 421 (553)
Q Consensus 353 ~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~--~~g~~~~~~~~~~~~~~~~~~~~~~~p 421 (553)
+.+.-.+..+|+..-+.-. ...+ ..|.+|..-...+.+ .......+++...++++.++..++.++
T Consensus 134 iTFL~lss~Y~~~~i~~WS---SGTG-gAGliGa~SYa~lT~~~~~spk~Tlli~l~lP~lfa~~yf~lL~ 200 (409)
T KOG3880|consen 134 ITFLALSSRYPSIVIAGWS---SGTG-GAGLIGASSYAFLTSWANLSPKSTLLIMLFLPALFAFAYFFLLK 200 (409)
T ss_pred eehhhhhccCCCceecccc---CCCC-cchhhhhhHHHHHhhhcCCChhhHHHHHHHHHHHHHHHHHheeC
Confidence 4445445555543222111 1111 112222222222222 233445667777777666666555554
No 295
>KOG2812|consensus
Probab=75.65 E-value=4.5 Score=38.72 Aligned_cols=12 Identities=17% Similarity=-0.033 Sum_probs=5.8
Q ss_pred cccccccccccc
Q psy15864 88 EKGTFLYKMAAP 99 (553)
Q Consensus 88 ~~gr~~~G~ga~ 99 (553)
...-++=|-|++
T Consensus 322 yG~aLlpGEGaa 333 (426)
T KOG2812|consen 322 YGKALLPGEGAA 333 (426)
T ss_pred cccccCCCccHH
Confidence 334445555554
No 296
>KOG3925|consensus
Probab=74.98 E-value=6.9 Score=37.82 Aligned_cols=8 Identities=38% Similarity=0.729 Sum_probs=3.7
Q ss_pred ccCCceee
Q psy15864 164 IPESPHWL 171 (553)
Q Consensus 164 lpEsp~~l 171 (553)
.+|+|.||
T Consensus 142 YfetPqyL 149 (371)
T KOG3925|consen 142 YFETPQYL 149 (371)
T ss_pred hccCcHHH
Confidence 34555443
No 297
>PF11671 Apis_Csd: Complementary sex determiner protein; InterPro: IPR021007 Sex determination proteins are found in eukaryotes. Proteins in this family are typically between 168 and 410 amino acids in length. It plays a role in the gender determination of around 20% of all animals. In the honeybee, the mechanism of sex determination depends on the complementary sex determiner (csd) gene which produces an SR-type protein. Males are homozygous while females are homozygous for the csd gene. Heterozygosity generates an active protein which initiates female development []. This entry represents the C-terminal end of the sex determination protein.
Probab=74.74 E-value=5.9 Score=31.93 Aligned_cols=8 Identities=13% Similarity=0.044 Sum_probs=3.3
Q ss_pred hhhhhccC
Q psy15864 105 TYVAEITQ 112 (553)
Q Consensus 105 ~~i~e~~p 112 (553)
.+|.-|++
T Consensus 98 i~v~pwv~ 105 (146)
T PF11671_consen 98 IMVGPWVS 105 (146)
T ss_pred ccccCccc
Confidence 33444443
No 298
>PRK03612 spermidine synthase; Provisional
Probab=74.62 E-value=29 Score=36.74 Aligned_cols=28 Identities=21% Similarity=0.082 Sum_probs=18.2
Q ss_pred chhhhhhhHHHHHHHHHHHHHHHHhHHH
Q psy15864 365 NIRATASGASGSSSYIFAFAVNKLYYPM 392 (553)
Q Consensus 365 ~~Rg~~~~~~~~~~~~~~~i~~~~~~~~ 392 (553)
+.-|..+++......+|+++.+++.-+.
T Consensus 145 ~~~g~ly~~ntlGa~~G~l~~~~vLlp~ 172 (521)
T PRK03612 145 HNVATVLAADYLGALVGGLAFPFLLLPR 172 (521)
T ss_pred hhhhhhHhHHhHHHHHHHHHHHHHHHHh
Confidence 4557777777766667766666665543
No 299
>smart00786 SHR3_chaperone ER membrane protein SH3. This family of proteins are membrane localised chaperones that are required for correct plasma membrane localisation of amino acid permeases (AAPs) PUBMED:15623581. Shr3 prevents AAPs proteins from aggregating and assists in their correct folding. In the absence of Shr3, AAPs are retained in the ER.
Probab=73.71 E-value=3.1 Score=36.72 Aligned_cols=8 Identities=25% Similarity=0.754 Sum_probs=3.2
Q ss_pred hhHhhhhH
Q psy15864 20 WKKAKKKE 27 (553)
Q Consensus 20 ~~k~~k~~ 27 (553)
|.-+++++
T Consensus 155 wYAer~~~ 162 (196)
T smart00786 155 WYAERKDA 162 (196)
T ss_pred HHHHHhHH
Confidence 33344433
No 300
>PF10669 Phage_Gp23: Protein gp23 (Bacteriophage A118); InterPro: IPR018926 This entry is represented by the major tail subunit protein, Gp23 of Listeria phage A118 and prophage found in Bacilli. The function is currently unknown.
Probab=73.20 E-value=6.2 Score=29.88 Aligned_cols=7 Identities=14% Similarity=0.800 Sum_probs=3.4
Q ss_pred hhhHhhh
Q psy15864 19 DWKKAKK 25 (553)
Q Consensus 19 ~~~k~~k 25 (553)
.|-+.+-
T Consensus 37 IW~~~r~ 43 (121)
T PF10669_consen 37 IWHDSRQ 43 (121)
T ss_pred HhhhHHH
Confidence 4555443
No 301
>KOG4364|consensus
Probab=72.64 E-value=4.4 Score=42.23 Aligned_cols=7 Identities=43% Similarity=0.937 Sum_probs=2.9
Q ss_pred ccccccc
Q psy15864 90 GTFLYKM 96 (553)
Q Consensus 90 gr~~~G~ 96 (553)
++|++-+
T Consensus 376 ~Kffqk~ 382 (811)
T KOG4364|consen 376 GKFFQKI 382 (811)
T ss_pred Hhhhccc
Confidence 4444433
No 302
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=70.75 E-value=17 Score=28.54 Aligned_cols=36 Identities=25% Similarity=0.181 Sum_probs=29.1
Q ss_pred cccchhhhhhhHHHHHHHHHHHHHHHHhHHHHhhcc
Q psy15864 362 FPNNIRATASGASGSSSYIFAFAVNKLYYPMLDTFH 397 (553)
Q Consensus 362 ~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~~~g 397 (553)
..+..++.+.++-...-.+++++.+.++|++++.+.
T Consensus 35 ~a~s~k~~~~a~klssefIsGilVGa~iG~llD~~a 70 (116)
T COG5336 35 SAESIKGYAQAFKLSSEFISGILVGAGIGWLLDKFA 70 (116)
T ss_pred cchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 345677888888888888999999999999998753
No 303
>KOG3810|consensus
Probab=69.87 E-value=20 Score=35.19 Aligned_cols=125 Identities=12% Similarity=0.127 Sum_probs=73.6
Q ss_pred HHhhhhcccCCcceeecchhHHHHHHHHHHHHHHhhcccCCCCChhHHHHHHHHHHHHhhhhccccceeeccccccchhh
Q psy15864 289 LCVVLIHYTGKRPLALISTGGSAACFIVVAVYAQFHLSYGWDSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRA 368 (553)
Q Consensus 289 ~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg 368 (553)
..-.+.|...-|++++.-.+...+.++++.+ ..+.+.+-+.-+++|...+.- ..-++|+-+..+++++-
T Consensus 61 pvFlLTD~lrYKPvivlq~ls~v~~w~~lv~---------g~sV~~mQvlE~FyG~~tAaE--IAYysYIYs~Vd~~~Yq 129 (433)
T KOG3810|consen 61 PVFLLTDYLRYKPVVVLQALSGVPVWIMLVF---------GPSVKAMQVLEFFYGPATAAE--IAYYSYIYSKVDPEMYK 129 (433)
T ss_pred HHHHHhhhhhcceeeeeeccchhHHHHHHHh---------cCCchheeeehhhcChHHHHH--HhhhheeeeecCHHHHH
Confidence 3345778887788888777766677776666 566666666666665544222 23357777888898888
Q ss_pred hhhhHHHHHHHHHHHHHHHHhHHHHhhcc-chhhHHHHHHHHHHHHhhheEEcccCC
Q psy15864 369 TASGASGSSSYIFAFAVNKLYYPMLDTFH-LWGTLYFYAAISVVGTLYMYFVMPETE 424 (553)
Q Consensus 369 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~pet~ 424 (553)
+++|.+-...-.|-+.+..+...++.... .+..+-........++.+..+++|.-+
T Consensus 130 rvt~y~RaA~L~g~~~g~vlaQlLvs~~~~sy~~LN~ISL~~~~ia~~~A~fLP~v~ 186 (433)
T KOG3810|consen 130 RVTGYCRAAFLVGKFVGSVLAQLLVSLETLSYTTLNYISLAEVTIAVLLALFLPRVK 186 (433)
T ss_pred HHHHHhHHHHHHHhHHHhHHHHHHhhhcccchhhhchhhHHHHHHHHHHHhhCCCCc
Confidence 88887766665555555544444432211 122333334444444444446666554
No 304
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=67.22 E-value=9.8 Score=32.38 Aligned_cols=33 Identities=3% Similarity=-0.073 Sum_probs=21.2
Q ss_pred cccceeeccccccchhhhhhhHHHHHHHHHHHH
Q psy15864 352 LLPWMLIGEVFPNNIRATASGASGSSSYIFAFA 384 (553)
Q Consensus 352 ~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i 384 (553)
.+.|-.++-.-.++.-|+..|+-.+-.+++-+.
T Consensus 113 GisYGilSaSWD~~r~GSllG~~e~~~N~~r~~ 145 (153)
T PF11947_consen 113 GISYGILSASWDPEREGSLLGWEEFKRNWGRMW 145 (153)
T ss_pred hhhhhhcccccCCCCCCCcccHHHHHHhHHHHH
Confidence 344555555566776798888877766665443
No 305
>COG1480 Predicted membrane-associated HD superfamily hydrolase [General function prediction only]
Probab=66.65 E-value=43 Score=35.78 Aligned_cols=24 Identities=25% Similarity=0.264 Sum_probs=12.1
Q ss_pred HHHHHHHHhhhhcccCCcceeecc
Q psy15864 283 ELGGALLCVVLIHYTGKRPLALIS 306 (553)
Q Consensus 283 ~~~g~~~~g~l~dr~Grr~~l~~~ 306 (553)
.++.++.+..+..+..||...+..
T Consensus 383 ~l~s~~~~~~~l~~~s~rs~i~~~ 406 (700)
T COG1480 383 ALLSSFSALVLLRKMSRRSDILKS 406 (700)
T ss_pred HHHHHHHHHHHHhhhhhhHHHHHH
Confidence 334444445555666666544433
No 306
>KOG3925|consensus
Probab=66.35 E-value=6.3 Score=38.05 Aligned_cols=8 Identities=50% Similarity=0.987 Sum_probs=3.4
Q ss_pred chhhHhhh
Q psy15864 18 LDWKKAKK 25 (553)
Q Consensus 18 ~~~~k~~k 25 (553)
.+|++.+|
T Consensus 17 ~k~~~~~~ 24 (371)
T KOG3925|consen 17 HKWKQQKK 24 (371)
T ss_pred hhhhhhCh
Confidence 34444333
No 307
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=66.15 E-value=52 Score=34.18 Aligned_cols=21 Identities=19% Similarity=0.254 Sum_probs=13.4
Q ss_pred HHHHHhhhhcccCCcceeecc
Q psy15864 286 GALLCVVLIHYTGKRPLALIS 306 (553)
Q Consensus 286 g~~~~g~l~dr~Grr~~l~~~ 306 (553)
+.++=...+.|+|||+..++-
T Consensus 56 aPiVDs~y~~~~GRRKSWiiP 76 (544)
T PF13000_consen 56 APIVDSVYSKRIGRRKSWIIP 76 (544)
T ss_pred hhhhhhhcccccCCcchhhhH
Confidence 333444556689999987653
No 308
>KOG3097|consensus
Probab=66.07 E-value=19 Score=34.98 Aligned_cols=75 Identities=7% Similarity=-0.077 Sum_probs=43.2
Q ss_pred HHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHHHHHHHHHhhcccCCCCChhHHHHHHHHHHHHhhhhcccccee
Q psy15864 278 LLGVAELGGALLCVVLIHYTGKRPLALISTGGSAACFIVVAVYAQFHLSYGWDSPLVPTVFLVLAAFLTHICIRLLPWML 357 (553)
Q Consensus 278 ~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (553)
...+.-+..+++.+.+..++|-|.++.++..+.......-. ......++....+.|++.+..+.+-. +|
T Consensus 66 ~~y~~l~~s~m~~~~~Ir~~g~K~tm~lav~~Y~lyiA~Nl----------~pr~~tlVPa~~~~G~aa~p~W~Skg-tY 134 (390)
T KOG3097|consen 66 ALYLSLIDSSMFMPLLIRFLGTKWTMVLAVFPYALYIAANL----------EPRYETLVPAGLVLGMAAGPIWASKG-TY 134 (390)
T ss_pred hhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhc----------chhHHhhccHHHhhccccccccccCc-ce
Confidence 34455566677777899999999887665444332222111 11222334455566666666665554 78
Q ss_pred eccccc
Q psy15864 358 IGEVFP 363 (553)
Q Consensus 358 ~~e~~p 363 (553)
++++..
T Consensus 135 lT~~g~ 140 (390)
T KOG3097|consen 135 LTPMGQ 140 (390)
T ss_pred ecHHHH
Confidence 777643
No 309
>COG1288 Predicted membrane protein [Function unknown]
Probab=65.80 E-value=1.6e+02 Score=29.97 Aligned_cols=28 Identities=11% Similarity=0.159 Sum_probs=19.3
Q ss_pred chHHHHHHHHHHHHHHHHHhcc--ccCCce
Q psy15864 142 HWRSAAILNLLFPILALCALYF--IPESPH 169 (553)
Q Consensus 142 gWr~~f~i~~i~~li~~i~~~~--lpEsp~ 169 (553)
+||.+.|+...+..+..+.++- +.+.|.
T Consensus 217 ~~Riv~~v~~~~~~i~y~~~Ya~KvkkdP~ 246 (481)
T COG1288 217 GLRIVVWVVFTLISIIYVYWYASKVKKDPT 246 (481)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhcCcc
Confidence 8999999887776666555543 555553
No 310
>PF12805 FUSC-like: FUSC-like inner membrane protein yccS
Probab=64.12 E-value=20 Score=34.51 Aligned_cols=14 Identities=29% Similarity=0.484 Sum_probs=5.7
Q ss_pred CChhHHHHHHHHHH
Q psy15864 331 SPLVPTVFLVLAAF 344 (553)
Q Consensus 331 ~~~~~~~~~~~~~~ 344 (553)
+.|.+.+..+++++
T Consensus 22 ~~~l~~~~~~~~~F 35 (284)
T PF12805_consen 22 YPWLLILVLALLTF 35 (284)
T ss_pred ccHHHHHHHHHHHH
Confidence 34444444444333
No 311
>TIGR01667 YCCS_YHJK integral membrane protein, YccS/YhfK family. TMHMM on members of this model shows a consensus of 11 transmembrane helices separated into two clusters, an N-terminal cluster of 6 and a central cluster of 5. This would indicate two non-membrane domains one on each side of the membrane
Probab=61.58 E-value=19 Score=39.48 Aligned_cols=41 Identities=17% Similarity=0.234 Sum_probs=21.7
Q ss_pred CCcceeecchhHHHHHHHHHHHHHHhhcccCCCCChhHHHHHHHHHHHH
Q psy15864 298 GKRPLALISTGGSAACFIVVAVYAQFHLSYGWDSPLVPTVFLVLAAFLT 346 (553)
Q Consensus 298 Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (553)
||.+-++++.++++++.+...+. ....|.+..+..+.++++
T Consensus 55 ~R~~~l~it~~~f~i~sl~v~ll--------~~~p~~~~~~l~~~tf~~ 95 (701)
T TIGR01667 55 GRLKNLIITLSCFSIASFLVQLL--------FPKPWLFPFLLTLLTFGF 95 (701)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH--------hcchHHHHHHHHHHHHHH
Confidence 44555666666666665555542 344555555555444443
No 312
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=60.20 E-value=17 Score=34.22 Aligned_cols=60 Identities=13% Similarity=0.063 Sum_probs=40.6
Q ss_pred hhhhccCcccccchhchhhhhHHHHHHHHHhhcccc----chHHHHHHHHHHHHHHHHHhccccC
Q psy15864 106 YVAEITQPHLRGMLSATASMTTIFGTVSQLFLGSFL----HWRSAAILNLLFPILALCALYFIPE 166 (553)
Q Consensus 106 ~i~e~~p~~~Rg~~~~~~~~~~~lG~~l~~~l~~~l----gWr~~f~i~~i~~li~~i~~~~lpE 166 (553)
...+.+| +.||.+.|+.-...+++..+-..+...+ .-...+++...+.++.++..++++.
T Consensus 120 t~~~NFP-~~RG~vvgilk~~~GLSaai~t~i~~~~f~~~~~~fll~la~~~~~v~l~~~~~vr~ 183 (250)
T PF06813_consen 120 TCVRNFP-RSRGTVVGILKGFFGLSAAIFTQIYSAFFGDDPSSFLLFLAVLPAVVCLVAMFFVRP 183 (250)
T ss_pred HHHHhCc-cccCceehhhhHHHHhHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhheec
Confidence 3446776 5799999999999999888866655544 3555555555556666655555433
No 313
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=59.94 E-value=9 Score=36.30 Aligned_cols=68 Identities=21% Similarity=0.318 Sum_probs=48.2
Q ss_pred ccccccccc--cchhhhhhhhhccCc-ccccchhchhhh-hHHHHHHHHHhhcccc------chHHHHHHHHHHHHHH
Q psy15864 90 GTFLYKMAA--PLVLVLTYVAEITQP-HLRGMLSATASM-TTIFGTVSQLFLGSFL------HWRSAAILNLLFPILA 157 (553)
Q Consensus 90 gr~~~G~ga--~~~~~~~~i~e~~p~-~~Rg~~~~~~~~-~~~lG~~l~~~l~~~l------gWr~~f~i~~i~~li~ 157 (553)
.|+++|++. ..+...+++.|++|. ..|+...+.... ...+|.++++.++..+ +||+.|.+..+.....
T Consensus 100 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (338)
T COG0477 100 LRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGALLWGWRAAFLLAALLGLLL 177 (338)
T ss_pred HHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHH
Confidence 345555554 355677999999998 678888888887 5777777777555433 7999777776666444
No 314
>KOG2881|consensus
Probab=58.73 E-value=1.6e+02 Score=27.59 Aligned_cols=35 Identities=14% Similarity=-0.128 Sum_probs=22.9
Q ss_pred HHHHHHHHHhhhhcccCCcceeecchhHHHHHHHH
Q psy15864 282 AELGGALLCVVLIHYTGKRPLALISTGGSAACFIV 316 (553)
Q Consensus 282 ~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~ 316 (553)
+..+..+.+-+++.|+.-|.+.+++.+++++..+.
T Consensus 252 CT~lAVigGk~lAskIS~rtVt~~ggi~Fi~Fgl~ 286 (294)
T KOG2881|consen 252 CTGLAVIGGKYLASKISVRTVTLIGGILFIIFGLV 286 (294)
T ss_pred HHHHHHhhhHHHhhhheeEEEEEecchhHHHHHHH
Confidence 33344444456788899888888887766655443
No 315
>PF11151 DUF2929: Protein of unknown function (DUF2929); InterPro: IPR021324 This family of proteins with unknown function appears to be restricted to Firmicutes.
Probab=58.35 E-value=36 Score=23.58 Aligned_cols=43 Identities=21% Similarity=0.442 Sum_probs=27.6
Q ss_pred hHHHHHHHHHhhccccchHHHHHHHHHHHHHHHHHhccccCCc
Q psy15864 126 TTIFGTVSQLFLGSFLHWRSAAILNLLFPILALCALYFIPESP 168 (553)
Q Consensus 126 ~~~lG~~l~~~l~~~lgWr~~f~i~~i~~li~~i~~~~lpEsp 168 (553)
+..+|.+.+++.+...+++....+..+++++..++...+|..+
T Consensus 14 ~~vvgyI~ssL~~~~~n~~~~~Ii~vi~~i~~~~~~~~i~~~~ 56 (57)
T PF11151_consen 14 GEVVGYIGSSLTGVTYNFTTAAIIAVIFGIIVANIIAVIPKKS 56 (57)
T ss_pred HHHHHHHHHHHhCCCCChHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 3444555555555555788888888888877776666666543
No 316
>TIGR00844 c_cpa1 na(+)/h(+) antiporter. This model is specific for the fungal members of this family.
Probab=58.23 E-value=3e+02 Score=30.67 Aligned_cols=10 Identities=40% Similarity=0.880 Sum_probs=6.3
Q ss_pred chHHHHHHHH
Q psy15864 142 HWRSAAILNL 151 (553)
Q Consensus 142 gWr~~f~i~~ 151 (553)
.||.++.+.+
T Consensus 98 ~wrsV~rLl~ 107 (810)
T TIGR00844 98 HWVSVTMLLV 107 (810)
T ss_pred hHHHHHHHHH
Confidence 6777666543
No 317
>KOG2927|consensus
Probab=57.36 E-value=6.8 Score=37.77 Aligned_cols=11 Identities=9% Similarity=0.129 Sum_probs=5.6
Q ss_pred hhhhccCcccc
Q psy15864 106 YVAEITQPHLR 116 (553)
Q Consensus 106 ~i~e~~p~~~R 116 (553)
.+--++|...|
T Consensus 205 vLFPLWP~~mR 215 (372)
T KOG2927|consen 205 VLFPLWPRRMR 215 (372)
T ss_pred HhcccCcHHHh
Confidence 34455665544
No 318
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=56.59 E-value=1.6e+02 Score=31.14 Aligned_cols=25 Identities=12% Similarity=0.212 Sum_probs=14.7
Q ss_pred HHHHHHHHHHHHHHHhhhhcccCCc
Q psy15864 276 TLLLGVAELGGALLCVVLIHYTGKR 300 (553)
Q Consensus 276 ~~~~~i~~~~g~~~~g~l~dr~Grr 300 (553)
..++.++++++...++++-..+|.+
T Consensus 303 i~~y~~~~~iaGy~S~~~yk~~~g~ 327 (521)
T PF02990_consen 303 IILYALTSFIAGYVSARLYKSFGGK 327 (521)
T ss_pred HHHHHHHhhHHHHHHHHHHHHcCCC
Confidence 3344556666666666666666653
No 319
>PF10500 SR-25: Nuclear RNA-splicing-associated protein; InterPro: IPR019532 SR-25, otherwise known as ADP-ribosylation factor-like factor 6-interacting protein 4, is expressed in virtually all tissue types. At the N terminus there is a repeat of serine-arginine (SR repeat), and towards the middle of the protein there are clusters of both serines and of basic amino acids. The presence of many nuclear localisation signals strongly implies that this is a nuclear protein that may contribute to RNA splicing []. SR-25 is also implicated, along with heat-shock-protein-27, as a mediator in the Rac1 (GTPase ras-related C3 botulinum toxin substrate 1; also see IPR019093 from INTERPRO) signalling pathway [].
Probab=56.35 E-value=19 Score=32.47 Aligned_cols=16 Identities=19% Similarity=0.138 Sum_probs=9.0
Q ss_pred ccCCceeeeecCChHH
Q psy15864 164 IPESPHWLISQGRMQE 179 (553)
Q Consensus 164 lpEsp~~l~~~~~~~~ 179 (553)
=|||-+.-+-+|..+-
T Consensus 177 DpETGRtRLIkGdGEi 192 (225)
T PF10500_consen 177 DPETGRTRLIKGDGEI 192 (225)
T ss_pred cCCCCceeeecccchH
Confidence 4777665555555443
No 320
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=54.82 E-value=45 Score=36.63 Aligned_cols=26 Identities=15% Similarity=0.100 Sum_probs=11.9
Q ss_pred HHHHHHHHHHHhhheEEcccCCCCCh
Q psy15864 403 YFYAAISVVGTLYMYFVMPETEGRTL 428 (553)
Q Consensus 403 ~~~~~~~~~~~~~~~~~~pet~~~~~ 428 (553)
++..+..++.+++.+++.|-.+.+..
T Consensus 297 li~l~~~~l~~l~~~~~~~~l~~~~~ 322 (709)
T COG2274 297 LIVLAAIPLNVLITLIFQPLLRRKTR 322 (709)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333334444444455565544443
No 321
>PF09605 Trep_Strep: Hypothetical bacterial integral membrane protein (Trep_Strep); InterPro: IPR011733 This family consists of strongly hydrophobic proteins about 190 amino acids in length with a strongly basic motif near the C terminus. If is found in rather few species, but in paralogous families of 12 members in the oral pathogenic spirochaete Treponema denticola and 2 in Streptococcus pneumoniae (strain ATCC BAA-255 / R6).
Probab=54.25 E-value=1.6e+02 Score=26.22 Aligned_cols=43 Identities=16% Similarity=0.173 Sum_probs=31.4
Q ss_pred HHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHHHHH
Q psy15864 276 TLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAACFIVVA 318 (553)
Q Consensus 276 ~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~ 318 (553)
.....+.++++.++.-.+..|.++|.++.+..++.++..++.+
T Consensus 34 ~~~~~i~ali~g~vyml~~~KV~K~G~~~i~~~i~gl~~~~~G 76 (186)
T PF09605_consen 34 LFMPAIAALICGIVYMLMVAKVPKRGAFLIMGIIMGLIFFLMG 76 (186)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHh
Confidence 4556677888888888899999999887766666555544443
No 322
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=52.92 E-value=4.5 Score=37.57 Aligned_cols=10 Identities=20% Similarity=0.242 Sum_probs=0.0
Q ss_pred cCCcceeecc
Q psy15864 297 TGKRPLALIS 306 (553)
Q Consensus 297 ~Grr~~l~~~ 306 (553)
|.||...-++
T Consensus 72 F~RrLLCPLG 81 (381)
T PF05297_consen 72 FKRRLLCPLG 81 (381)
T ss_dssp ----------
T ss_pred HHHhhcCcch
Confidence 4555444333
No 323
>PRK10263 DNA translocase FtsK; Provisional
Probab=52.49 E-value=22 Score=41.24 Aligned_cols=35 Identities=17% Similarity=0.002 Sum_probs=21.2
Q ss_pred HHHHHHHHHHHhhhhcccCCcceeecchhHHHHHH
Q psy15864 280 GVAELGGALLCVVLIHYTGKRPLALISTGGSAACF 314 (553)
Q Consensus 280 ~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~ 314 (553)
..|+++|.+++..+...+|.-...++.++++++++
T Consensus 141 ~gGGIIG~lLs~lL~~LfG~vGa~LILLlllLIGL 175 (1355)
T PRK10263 141 ASGGVIGSLLSTTLQPLLHSSGGTIALLCVWAAGL 175 (1355)
T ss_pred cccchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 45788888888888777776444433333333333
No 324
>TIGR01666 YCCS hypothetical membrane protein, TIGR01666. This model represents a clade of sequences from gamma and beta proteobacteria. These proteins are 700 amino acids long and many have been annotated as putative membrane proteins. The gene from Salmonella has been annotated as a putative efflux transporter. The gene from E. coli has the name yccS.
Probab=51.76 E-value=86 Score=34.52 Aligned_cols=48 Identities=15% Similarity=0.173 Sum_probs=24.1
Q ss_pred hhhhccc----CCcceeecchhHHHHHHHHHHHHHHhhcccCCCCChhHHHHHHHHHHHH
Q psy15864 291 VVLIHYT----GKRPLALISTGGSAACFIVVAVYAQFHLSYGWDSPLVPTVFLVLAAFLT 346 (553)
Q Consensus 291 g~l~dr~----Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (553)
+-++|.= ||.+-++++.+++.++.+...+. .+..|.+..+..+..+++
T Consensus 44 ~al~D~d~~~~~R~~~l~~t~~~f~i~sl~v~ll--------~~~p~lf~~~l~~~tf~~ 95 (704)
T TIGR01666 44 AALVDLDDRLTGRLKNVIFTLICFSIASFSVELL--------FGKPWLFAVGLTVSTFGF 95 (704)
T ss_pred hccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHH--------hcCcHHHHHHHHHHHHHH
Confidence 3455543 44445555555555555554432 345555555555554433
No 325
>TIGR01478 STEVOR variant surface antigen, stevor family. This model represents the stevor branch of the rifin/stevor family (pfam02009) of predicted variant surface antigens as found in Plasmodium falciparum. This model is based on a set of stevor sequences kindly provided by Matt Berriman from the Sanger Center. This is a global model and assesses a penalty for incomplete sequence. Additional fragmentary sequences may be found with the fragment model and a cutoff of 8 bits.
Probab=49.99 E-value=13 Score=34.96 Aligned_cols=24 Identities=13% Similarity=0.393 Sum_probs=14.2
Q ss_pred cchHHHHHHHHHHHHHHHHHhccc
Q psy15864 141 LHWRSAAILNLLFPILALCALYFI 164 (553)
Q Consensus 141 lgWr~~f~i~~i~~li~~i~~~~l 164 (553)
..|-+.-++..+++++++++..|+
T Consensus 259 ~Pcgiaalvllil~vvliiLYiWl 282 (295)
T TIGR01478 259 LPYGIAALVLIILTVVLIILYIWL 282 (295)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHH
Confidence 356666666666666665555444
No 326
>KOG2422|consensus
Probab=48.95 E-value=6 Score=40.87 Aligned_cols=12 Identities=25% Similarity=0.703 Sum_probs=6.1
Q ss_pred EeeeEeeccCCC
Q psy15864 486 TLYMYFVMPETE 497 (553)
Q Consensus 486 ~~~~~f~~peTk 497 (553)
+++-.+++|+--
T Consensus 584 tv~~~yv~P~~~ 595 (665)
T KOG2422|consen 584 TVLSFYVLPPMP 595 (665)
T ss_pred hhhcccccCCCC
Confidence 344445566654
No 327
>PRK14231 camphor resistance protein CrcB; Provisional
Probab=48.51 E-value=1.4e+02 Score=24.76 Aligned_cols=15 Identities=0% Similarity=-0.051 Sum_probs=7.1
Q ss_pred hhhccccceeeccccc
Q psy15864 348 ICIRLLPWMLIGEVFP 363 (553)
Q Consensus 348 ~~~~~~~~~~~~e~~p 363 (553)
.++.+.. ++..|...
T Consensus 71 GgfTTFS-Tf~~e~~~ 85 (129)
T PRK14231 71 GAFTTFS-AFSVDTIQ 85 (129)
T ss_pred cccccHH-HHHHHHHH
Confidence 3443443 55556553
No 328
>COG3162 Predicted membrane protein [Function unknown]
Probab=47.86 E-value=1.3e+02 Score=23.39 Aligned_cols=53 Identities=17% Similarity=0.212 Sum_probs=26.6
Q ss_pred hHHHHHHHHHHHHhhhhhHHHHhhHHHHHHhhCCCCChHHHHHHHHHHHHHHHH
Q psy15864 235 LPYAIVTSLFFIGQFGGMTTLQTYAVGIFESIHAPLDPYFATLLLGVAELGGAL 288 (553)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~g~~ 288 (553)
+++.+...+.++..+.++..+..|.|.++..--++. ......+++++.++.++
T Consensus 23 ~~Fa~~ltl~flv~Y~~filLiaf~~~~l~tp~~~~-~Vt~Gip~gvg~fv~tf 75 (102)
T COG3162 23 RRFAVPLTLIFLVVYFGFILLIAFAPGWLATPLFGA-SVTRGIPFGVGVFVMTF 75 (102)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHhcCcccCC-ceehhHhHHHHHHHHHH
Confidence 344455555555666666667777777664432222 12233444444444443
No 329
>KOG1996|consensus
Probab=46.88 E-value=60 Score=30.63 Aligned_cols=20 Identities=10% Similarity=0.134 Sum_probs=9.2
Q ss_pred ccccccccccchhhhhhhhh
Q psy15864 90 GTFLYKMAAPLVLVLTYVAE 109 (553)
Q Consensus 90 gr~~~G~ga~~~~~~~~i~e 109 (553)
+.|..+.|+.+.++.-++..
T Consensus 202 n~fg~~~gg~ltvA~~im~k 221 (378)
T KOG1996|consen 202 NSFGANTGGGLTVAHKIMQK 221 (378)
T ss_pred chhhhhcccchhHHHHHHHH
Confidence 34444455544444444433
No 330
>PF11299 DUF3100: Protein of unknown function (DUF3100); InterPro: IPR021450 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.
Probab=46.82 E-value=39 Score=30.89 Aligned_cols=91 Identities=9% Similarity=0.054 Sum_probs=42.1
Q ss_pred hhhhcccCC-----cceeecchhHHHHHHHHHHHHHHhhcccCCCCChhHHHHHHHHHHHHhhhhccccceeeccccccc
Q psy15864 291 VVLIHYTGK-----RPLALISTGGSAACFIVVAVYAQFHLSYGWDSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNN 365 (553)
Q Consensus 291 g~l~dr~Gr-----r~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~ 365 (553)
+.++||+|- |-++-...+...++.+.+.++..+.. ..............|.+.+....... .-+.+.+| +
T Consensus 128 aiI~ekYGldSpEgrGVl~~Yi~GTvfGtiffsllas~~a---~~~~fhP~ALAMasGvGSgSMMaAa~-~aL~~~~P-~ 202 (241)
T PF11299_consen 128 AIISEKYGLDSPEGRGVLGVYIIGTVFGTIFFSLLASLLA---SLGIFHPYALAMASGVGSGSMMAAAS-GALAAAYP-E 202 (241)
T ss_pred eeeehhcCCCCccccceEEEeeehhhHHHHHHHHHHHHHH---hccCCCHHHHHHHcCCcHHHHHHHHH-HHHHHHCc-c
Confidence 357888874 44554444444555555444332211 11222333444444444433333332 44456676 4
Q ss_pred hhhhhhhHHHHHHHHHHHHHH
Q psy15864 366 IRATASGASGSSSYIFAFAVN 386 (553)
Q Consensus 366 ~Rg~~~~~~~~~~~~~~~i~~ 386 (553)
......++.....-+.++.+.
T Consensus 203 ~a~~i~A~AaaSNllt~~~G~ 223 (241)
T PF11299_consen 203 MADQILAFAAASNLLTSVTGL 223 (241)
T ss_pred hHHHHHHHHHHHHHHHHHHHH
Confidence 445555555444444444443
No 331
>PRK14212 camphor resistance protein CrcB; Provisional
Probab=44.99 E-value=1.5e+02 Score=24.46 Aligned_cols=16 Identities=6% Similarity=-0.070 Sum_probs=8.5
Q ss_pred hhhhccccceeeccccc
Q psy15864 347 HICIRLLPWMLIGEVFP 363 (553)
Q Consensus 347 ~~~~~~~~~~~~~e~~p 363 (553)
..++.+.. ++..|.+.
T Consensus 74 lGgfTTFS-Tf~~E~~~ 89 (128)
T PRK14212 74 LGAFTTFS-TFSYETLD 89 (128)
T ss_pred hcCcccHH-HHHHHHHH
Confidence 34444443 66667654
No 332
>PTZ00370 STEVOR; Provisional
Probab=44.96 E-value=9.9 Score=35.71 Aligned_cols=34 Identities=15% Similarity=0.183 Sum_probs=16.6
Q ss_pred HHHhhccchhhHHHHHHHHHHHHhhheEEcccCC
Q psy15864 391 PMLDTFHLWGTLYFYAAISVVGTLYMYFVMPETE 424 (553)
Q Consensus 391 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~pet~ 424 (553)
.....+..+....++.++.+++++++++|+...|
T Consensus 249 aAsaaF~Pygiaalvllil~vvliilYiwlyrrR 282 (296)
T PTZ00370 249 AASSAFYPYGIAALVLLILAVVLIILYIWLYRRR 282 (296)
T ss_pred HHHHhhcccHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 3334444444444444555555555555554433
No 333
>PF12670 DUF3792: Protein of unknown function (DUF3792); InterPro: IPR023804 Members of this family of strongly hydrophobic putative transmembrane protein average about 125 amino acids in length and occur mostly, but not exclusively, in the Firmicutes. Members are quite diverse in sequence. Their function is unknown.
Probab=44.94 E-value=1.7e+02 Score=23.73 Aligned_cols=35 Identities=6% Similarity=-0.159 Sum_probs=18.6
Q ss_pred HHHHHHHHHHHHHHHHHhhhhcccCCcceeecchh
Q psy15864 274 FATLLLGVAELGGALLCVVLIHYTGKRPLALISTG 308 (553)
Q Consensus 274 ~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~ 308 (553)
.......+..+++.+++|+++-|.-+++-++.+..
T Consensus 38 ~~~~~~~~i~~ls~~~GG~~a~~~~~~kG~l~G~~ 72 (116)
T PF12670_consen 38 ILPWLVVIIYILSVFIGGFYAGRKAGSKGWLHGLL 72 (116)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHH
Confidence 33444445556666666766655544444444433
No 334
>PF02554 CstA: Carbon starvation protein CstA; InterPro: IPR003706 Escherichia coli induces the synthesis of at least 30 proteins at the onset of carbon starvation, two-thirds of which are positively regulated by the cyclic AMP (cAMP) and cAMP receptor protein (CRP) complex. This family consists of carbon starvation protein CstA a predicted membrane protein. It has been suggested that CstA is involved in peptide utilization [].; GO: 0009267 cellular response to starvation, 0016020 membrane
Probab=44.70 E-value=3.4e+02 Score=27.17 Aligned_cols=38 Identities=13% Similarity=0.169 Sum_probs=24.3
Q ss_pred hccCcccccchhch-hhhhHHHHHHHHHhhccccchHHHH
Q psy15864 109 EITQPHLRGMLSAT-ASMTTIFGTVSQLFLGSFLHWRSAA 147 (553)
Q Consensus 109 e~~p~~~Rg~~~~~-~~~~~~lG~~l~~~l~~~lgWr~~f 147 (553)
|+.|.+ |-...+. +..-.+.|+++||+++..+||--.+
T Consensus 48 DYvP~~-~~vlfghhf~sIAGaGPI~GPi~aa~~GwlPa~ 86 (376)
T PF02554_consen 48 DYVPTN-KWVLFGHHFASIAGAGPIVGPILAAQFGWLPAL 86 (376)
T ss_pred CCCCCc-hHHhhHHHHHHHhccccchHHHHHHHhcchHHH
Confidence 455544 3344444 3444578899999999888987333
No 335
>PRK14219 camphor resistance protein CrcB; Provisional
Probab=44.57 E-value=1.3e+02 Score=25.05 Aligned_cols=15 Identities=7% Similarity=-0.037 Sum_probs=7.3
Q ss_pred hhhccccceeeccccc
Q psy15864 348 ICIRLLPWMLIGEVFP 363 (553)
Q Consensus 348 ~~~~~~~~~~~~e~~p 363 (553)
.++.+.. ++..|.+.
T Consensus 74 GgfTTFS-Tf~~E~~~ 88 (132)
T PRK14219 74 GSFTTFS-TFSVETIQ 88 (132)
T ss_pred cchhhHH-HHHHHHHH
Confidence 3443443 55566653
No 336
>PTZ00372 endonuclease 4-like protein; Provisional
Probab=44.41 E-value=11 Score=37.99 Aligned_cols=11 Identities=9% Similarity=-0.341 Sum_probs=4.3
Q ss_pred CCCCCCCcchh
Q psy15864 10 GTFTEPTPLDW 20 (553)
Q Consensus 10 ~~~~~~~~~~~ 20 (553)
+..+..+..|-
T Consensus 35 ~~~~~~~~~~~ 45 (413)
T PTZ00372 35 SKEILSTFSEE 45 (413)
T ss_pred cccccCchhhh
Confidence 33344444333
No 337
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=44.10 E-value=46 Score=26.29 Aligned_cols=17 Identities=6% Similarity=-0.207 Sum_probs=10.3
Q ss_pred HHHHHHHHHHhhhhccc
Q psy15864 281 VAELGGALLCVVLIHYT 297 (553)
Q Consensus 281 i~~~~g~~~~g~l~dr~ 297 (553)
+++++.....||+.|+|
T Consensus 53 IsGilVGa~iG~llD~~ 69 (116)
T COG5336 53 ISGILVGAGIGWLLDKF 69 (116)
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 33444445567888885
No 338
>PRK15015 carbon starvation protein A; Provisional
Probab=43.86 E-value=4.6e+02 Score=28.50 Aligned_cols=37 Identities=5% Similarity=0.056 Sum_probs=24.9
Q ss_pred hccCcccccchhchhhhhHHHHHHHHHhhccccchHH
Q psy15864 109 EITQPHLRGMLSATASMTTIFGTVSQLFLGSFLHWRS 145 (553)
Q Consensus 109 e~~p~~~Rg~~~~~~~~~~~lG~~l~~~l~~~lgWr~ 145 (553)
|+.|.+++-...==+..-.+.|+++||+++..+||--
T Consensus 79 DYvPt~k~VLfGHHFasIAGAGPivGPvlAa~~GwlP 115 (701)
T PRK15015 79 DYVPTDKKVLFGHHFAAIAGAGPLVGPVLAAQMGYLP 115 (701)
T ss_pred CcCcCCccchhHHHHHHHhccCccHHHHHHHHHcchH
Confidence 5666665543333345556788999999988888853
No 339
>PF03222 Trp_Tyr_perm: Tryptophan/tyrosine permease family; InterPro: IPR018227 Amino acid permeases are integral membrane proteins involved in the transport of amino acids into the cell. A number of such proteins have been found to be evolutionary related [, , ]. Aromatic amino acids are concentrated in the cytoplasm of Escherichia coli by 4 distinct transport systems: a general aromatic amino acid permease, and a specific permease for each of the 3 types (Phe, Tyr and Trp) []. It has been shown [] that some permeases in E. coli and related bacteria are evolutionary related. These permeases are proteins of about 400 to 420 amino acids and are located in the cytoplasmic membrane and, like bacterial sugar/cation transporters, are thought to contain 12 transmembrane (TM) regions [] - hydropathy analysis, however, is inconclusive, suggesting the possibility of 10 to 12 membrane-spanning domains []. The best conserved domain is a stretch of 20 residues which seems to be located in a cytoplasmic loop between the first and second transmembrane region.
Probab=43.81 E-value=3.6e+02 Score=27.32 Aligned_cols=12 Identities=0% Similarity=0.038 Sum_probs=7.5
Q ss_pred HHHhhhhcccCC
Q psy15864 288 LLCVVLIHYTGK 299 (553)
Q Consensus 288 ~~~g~l~dr~Gr 299 (553)
..+..+.||..|
T Consensus 136 ~~g~~~v~~~n~ 147 (394)
T PF03222_consen 136 YFGTKAVDRINR 147 (394)
T ss_pred HhhHHHHHHHHH
Confidence 445567777665
No 340
>KOG3817|consensus
Probab=43.33 E-value=88 Score=30.53 Aligned_cols=26 Identities=12% Similarity=0.165 Sum_probs=13.5
Q ss_pred HHHHHHHHHHhhhhcccCCcceeecc
Q psy15864 281 VAELGGALLCVVLIHYTGKRPLALIS 306 (553)
Q Consensus 281 i~~~~g~~~~g~l~dr~Grr~~l~~~ 306 (553)
+|.+..-++..+++-|+-.|+.++.+
T Consensus 170 ~GilaSLl~Viflv~rf~PKkt~~~~ 195 (452)
T KOG3817|consen 170 IGILASLLVVIFLVARFFPKKTMMYG 195 (452)
T ss_pred HHHHHHHHHHHHHHHHhcccccceEE
Confidence 33333444555667776655554433
No 341
>PRK14204 camphor resistance protein CrcB; Provisional
Probab=42.82 E-value=1.7e+02 Score=24.19 Aligned_cols=16 Identities=6% Similarity=0.030 Sum_probs=8.3
Q ss_pred chhHHHHHHHHHHHHH
Q psy15864 306 STGGSAACFIVVAVYA 321 (553)
Q Consensus 306 ~~~~~~i~~~~~~~~~ 321 (553)
.+++-++++++++++.
T Consensus 40 Tl~VNi~GsfllG~l~ 55 (127)
T PRK14204 40 TFSVNIIGCFVIGFMG 55 (127)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 3444556666655543
No 342
>PF06123 CreD: Inner membrane protein CreD; InterPro: IPR010364 This family consists of several bacterial CreD or Cet inner membrane proteins. Dominant mutations of the cet gene of Escherichia coli result in tolerance to colicin E2 and increased amounts of an inner membrane protein with a Mr of 42,000. The cet gene is shown to be in the same operon as the phoM gene, which is required in a phoR background for expression of the structural gene for alkaline phosphatase, phoA. Although the Cet protein is not required for phoA expression, it has been suggested that the Cet protein has an enhancing effect on the transcription of phoA [].
Probab=42.61 E-value=1.4e+02 Score=30.53 Aligned_cols=32 Identities=13% Similarity=0.070 Sum_probs=16.0
Q ss_pred HHHHHhhhhcccCCcceeecchhHHHHHHHHH
Q psy15864 286 GALLCVVLIHYTGKRPLALISTGGSAACFIVV 317 (553)
Q Consensus 286 g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~ 317 (553)
-++++-++.+.+.++++-.+=.++.+++.+++
T Consensus 307 LTF~~fflfE~~~~~~iHpiQY~LVGlAl~lF 338 (430)
T PF06123_consen 307 LTFLAFFLFELLSKLRIHPIQYLLVGLALVLF 338 (430)
T ss_pred HHHHHHHHHHHHhcCcccHHHHHHHHHHHHHH
Confidence 34444556666666666544444443443333
No 343
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=42.36 E-value=45 Score=26.18 Aligned_cols=34 Identities=12% Similarity=0.170 Sum_probs=16.2
Q ss_pred hhhHHHHHHHHHhhcccc--------chHHHHHHHHHHHHHH
Q psy15864 124 SMTTIFGTVSQLFLGSFL--------HWRSAAILNLLFPILA 157 (553)
Q Consensus 124 ~~~~~lG~~l~~~l~~~l--------gWr~~f~i~~i~~li~ 157 (553)
.....+..++|.++|.++ .|-.+|++.++...+.
T Consensus 49 G~~~v~pil~G~~lG~WLD~~~~t~~~~tl~~lllGv~~G~~ 90 (100)
T TIGR02230 49 GWSVAIPTLLGVAVGIWLDRHYPSPFSWTLTMLIVGVVIGCL 90 (100)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCcHHHHHHHHHHHHHHHH
Confidence 333334444444555544 3555665555544333
No 344
>TIGR02185 Trep_Strep conserved hypothetical integral membrane protein TIGR02185. This family consists of strongly hydrophobic proteins about 190 amino acids in length with a strongly basic motif near the C-terminus. If is found in rather few species, but in paralogous families of 12 members in the oral pathogenic spirochaete Treponema denticola and 2 in Streptococcus pneumoniae R6.
Probab=41.94 E-value=2.6e+02 Score=25.01 Aligned_cols=37 Identities=11% Similarity=0.067 Sum_probs=26.5
Q ss_pred HHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHH
Q psy15864 276 TLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAA 312 (553)
Q Consensus 276 ~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i 312 (553)
.....+.++++.++.-.+..|.+|+.++.+..++.++
T Consensus 36 ~~~p~i~al~~g~vyml~~~KV~K~G~~~i~~~i~gl 72 (189)
T TIGR02185 36 LFSPGITAFLVGIIFFLMVAKVPKRGVIFIFGILLGL 72 (189)
T ss_pred HHHHHHHHHHHhHHHhhhhhhcCCccHHHHHHHHHHH
Confidence 4456677778888888899999998776655544443
No 345
>PRK14217 camphor resistance protein CrcB; Provisional
Probab=41.81 E-value=2.1e+02 Score=23.94 Aligned_cols=15 Identities=0% Similarity=-0.133 Sum_probs=7.3
Q ss_pred hhHHHHHHHHHHHHH
Q psy15864 307 TGGSAACFIVVAVYA 321 (553)
Q Consensus 307 ~~~~~i~~~~~~~~~ 321 (553)
+++-++++++++++.
T Consensus 40 l~VNi~GsfllG~~~ 54 (134)
T PRK14217 40 LLVNTLGSFLAGFFL 54 (134)
T ss_pred HHHHHHHHHHHHHHH
Confidence 344455555555443
No 346
>KOG3880|consensus
Probab=41.68 E-value=59 Score=31.52 Aligned_cols=61 Identities=16% Similarity=0.059 Sum_probs=36.1
Q ss_pred CCCChhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhH
Q psy15864 329 WDSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYY 390 (553)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~ 390 (553)
.++.|.+++..+.=|+..|..+... +--+.+-.+++.|-.+++.....-.+|..+++++.-
T Consensus 339 tpsi~ivf~lI~~EGLlGGasYVNT-f~~i~~e~~pd~rEfamsavs~sDS~Gi~lA~~lal 399 (409)
T KOG3880|consen 339 TPSIWIVFALILFEGLLGGASYVNT-FHNIHKETEPDVREFAMSAVSISDSIGIFLAGLLAL 399 (409)
T ss_pred ccHHHHHHHHHHHHhhcCchHHHHH-HHHHhhcCCchHHHHhHhhheecchhhHHHHHHHhc
Confidence 4455555555555555555554433 333445456788888888877766666666654443
No 347
>PTZ00370 STEVOR; Provisional
Probab=41.57 E-value=20 Score=33.70 Aligned_cols=27 Identities=15% Similarity=0.422 Sum_probs=15.7
Q ss_pred ccccchHHHHHHHHHHHHHHHHHhccc
Q psy15864 138 GSFLHWRSAAILNLLFPILALCALYFI 164 (553)
Q Consensus 138 ~~~lgWr~~f~i~~i~~li~~i~~~~l 164 (553)
+.+..|-+.-++..+++++++++..|+
T Consensus 252 aaF~Pygiaalvllil~vvliilYiwl 278 (296)
T PTZ00370 252 SAFYPYGIAALVLLILAVVLIILYIWL 278 (296)
T ss_pred HhhcccHHHHHHHHHHHHHHHHHHHHH
Confidence 333366666666666666665555544
No 348
>PRK14230 camphor resistance protein CrcB; Provisional
Probab=40.04 E-value=1.3e+02 Score=24.49 Aligned_cols=15 Identities=0% Similarity=0.111 Sum_probs=7.7
Q ss_pred chhHHHHHHHHHHHH
Q psy15864 306 STGGSAACFIVVAVY 320 (553)
Q Consensus 306 ~~~~~~i~~~~~~~~ 320 (553)
.+++-++++++++++
T Consensus 36 Tl~VNi~GsfllG~~ 50 (119)
T PRK14230 36 NLFANWTGALLIGIF 50 (119)
T ss_pred HHHHHHHHHHHHHHH
Confidence 344445555555544
No 349
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=39.87 E-value=1.3e+02 Score=28.41 Aligned_cols=57 Identities=11% Similarity=-0.076 Sum_probs=27.7
Q ss_pred cchhhhhhhHHHHHHHHHHHHHHHHhHHH----Hh-hccchhhHHHHHHHHHHHHhhheEEc
Q psy15864 364 NNIRATASGASGSSSYIFAFAVNKLYYPM----LD-TFHLWGTLYFYAAISVVGTLYMYFVM 420 (553)
Q Consensus 364 ~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~----~~-~~g~~~~~~~~~~~~~~~~~~~~~~~ 420 (553)
+-.|..++|+...+....+.+.++..+.+ .+ .......+-.++++++++...++.++
T Consensus 74 pii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~fi 135 (254)
T PF07857_consen 74 PIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVPSSPWLNYIGVALVLVSGIIFSFI 135 (254)
T ss_pred hHhhhhhhHHHHHHHHHHHHHHHHHHhhceeccccccccchhHHHHHHHHHHHHHHHheeee
Confidence 34556666666666666666655544422 11 11112234444555555555555554
No 350
>COG0814 SdaC Amino acid permeases [Amino acid transport and metabolism]
Probab=39.77 E-value=4.3e+02 Score=27.02 Aligned_cols=31 Identities=10% Similarity=-0.228 Sum_probs=19.4
Q ss_pred cccccchhchhhhhHHHHHHHHHhhccccch
Q psy15864 113 PHLRGMLSATASMTTIFGTVSQLFLGSFLHW 143 (553)
Q Consensus 113 ~~~Rg~~~~~~~~~~~lG~~l~~~l~~~lgW 143 (553)
++.++.++.+..+..+.|.+.-|......||
T Consensus 9 ~s~~~~vl~l~gT~IGAGvL~lP~a~~~~G~ 39 (415)
T COG0814 9 SSDLGGVLILAGTAIGAGVLFLPVAFGGGGF 39 (415)
T ss_pred cchHHHHHHHHccccccchhhhhHHhcCCcH
Confidence 3455666666667777777766666555444
No 351
>PRK11715 inner membrane protein; Provisional
Probab=39.55 E-value=1.8e+02 Score=29.88 Aligned_cols=32 Identities=6% Similarity=-0.009 Sum_probs=16.6
Q ss_pred HHHHHhhhhcccCCcceeecchhHHHHHHHHH
Q psy15864 286 GALLCVVLIHYTGKRPLALISTGGSAACFIVV 317 (553)
Q Consensus 286 g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~ 317 (553)
-++++-++.+.+.++++-.+=.++.+++.+++
T Consensus 313 LTF~~fFlfE~~~~~~iHpiQYlLVGlAl~lF 344 (436)
T PRK11715 313 LTFAAFFLFELLKKLRIHPVQYLLVGLALVLF 344 (436)
T ss_pred HHHHHHHHHHHhcCceecHHHHHHHHHHHHHH
Confidence 34445566677777666544444444443333
No 352
>PRK14210 camphor resistance protein CrcB; Provisional
Probab=39.16 E-value=1.9e+02 Score=23.89 Aligned_cols=16 Identities=6% Similarity=0.027 Sum_probs=8.4
Q ss_pred hhhhccccceeeccccc
Q psy15864 347 HICIRLLPWMLIGEVFP 363 (553)
Q Consensus 347 ~~~~~~~~~~~~~e~~p 363 (553)
..++.+.. ++..|.+.
T Consensus 76 ~GgfTTFS-Tf~~E~~~ 91 (127)
T PRK14210 76 CGGFTTFS-TLANDSLS 91 (127)
T ss_pred hcCcccHH-HHHHHHHH
Confidence 34444443 66667654
No 353
>PRK14196 chromosome condensation membrane protein; Provisional
Probab=39.06 E-value=2.1e+02 Score=23.64 Aligned_cols=15 Identities=13% Similarity=0.102 Sum_probs=7.7
Q ss_pred hhhccccceeeccccc
Q psy15864 348 ICIRLLPWMLIGEVFP 363 (553)
Q Consensus 348 ~~~~~~~~~~~~e~~p 363 (553)
.++.+.. ++..|.+.
T Consensus 75 GgfTTFS-Tf~~E~~~ 89 (127)
T PRK14196 75 GGLTTFS-TFSAEVVT 89 (127)
T ss_pred chhhhHH-HHHHHHHH
Confidence 3444443 66666653
No 354
>KOG2887|consensus
Probab=38.67 E-value=1.8e+02 Score=25.40 Aligned_cols=54 Identities=9% Similarity=0.055 Sum_probs=27.3
Q ss_pred eeeccccccchhhhhhhHHHHHHHHHHHHHHHHhHHHHhhccchhhHHHHHHHHHHHHhh
Q psy15864 356 MLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYYPMLDTFHLWGTLYFYAAISVVGTLY 415 (553)
Q Consensus 356 ~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 415 (553)
.++.-++.++.+- ....+++..+..+......+.......+.++.++..+...+
T Consensus 100 ~ql~~m~~p~Rl~------~T~~~l~~~~~Tly~al~~ks~iLtllf~ilq~laliwYsl 153 (175)
T KOG2887|consen 100 SQLKHMFSPERLP------ATLSYLATMVLTLYVALWLKSKILTLLFCILQVLALIWYSL 153 (175)
T ss_pred HHHHHhcChhHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4555555555433 24455666666666666665544333444444444443333
No 355
>PF04341 DUF485: Protein of unknown function, DUF485; InterPro: IPR007436 This family includes several putative integral membrane proteins.
Probab=38.31 E-value=1.1e+02 Score=23.47 Aligned_cols=30 Identities=20% Similarity=0.289 Sum_probs=18.6
Q ss_pred HHHHHHHHHHHHhhhhhHHHHhhHHHHHHh
Q psy15864 236 PYAIVTSLFFIGQFGGMTTLQTYAVGIFES 265 (553)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (553)
++.+...+.++..+.++..+..|.|.++..
T Consensus 16 r~~~~l~~i~l~~y~~~~ll~a~~p~~m~~ 45 (91)
T PF04341_consen 16 RLAWPLSAIFLVLYFGFVLLSAFAPELMAT 45 (91)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCHHHHcC
Confidence 334444445555566677777888887754
No 356
>PF01925 TauE: Sulfite exporter TauE/SafE; InterPro: IPR002781 This family is found in integral membrane proteins of prokaryotes which are uncharacterised.; GO: 0016021 integral to membrane
Probab=37.79 E-value=2.3e+02 Score=26.07 Aligned_cols=22 Identities=14% Similarity=0.232 Sum_probs=13.9
Q ss_pred cccccccchhhhhhhhhccCccc
Q psy15864 93 LYKMAAPLVLVLTYVAEITQPHL 115 (553)
Q Consensus 93 ~~G~ga~~~~~~~~i~e~~p~~~ 115 (553)
+.|+|++....+.+.. ..|++.
T Consensus 14 ~~G~g~g~i~~p~l~~-~l~~~~ 35 (240)
T PF01925_consen 14 ITGFGGGLIAVPILIL-FLPPKQ 35 (240)
T ss_pred HHcccHHHHHHHHHHH-HcCHHH
Confidence 4566666666676666 466665
No 357
>PRK14195 camphor resistance protein CrcB; Provisional
Probab=37.72 E-value=2.2e+02 Score=23.43 Aligned_cols=18 Identities=0% Similarity=-0.322 Sum_probs=9.3
Q ss_pred HHhhhhccccceeeccccc
Q psy15864 345 LTHICIRLLPWMLIGEVFP 363 (553)
Q Consensus 345 ~~~~~~~~~~~~~~~e~~p 363 (553)
++..++.+.. ++..|.+.
T Consensus 72 Gf~GgfTTFS-Tf~~e~~~ 89 (125)
T PRK14195 72 GVLGGFTTFS-AFSLDAAL 89 (125)
T ss_pred HhccCcccHH-HHHHHHHH
Confidence 3334444443 66667654
No 358
>TIGR02865 spore_II_E stage II sporulation protein E. Stage II sporulation protein E (SpoIIE) is a multiple membrane spanning protein with two separable functions. It plays a role in the switch to polar cell division during sporulation. By means of it protein phosphatase activity, located in the C-terminal region, it activates sigma-F. All proteins that score above the trusted cutoff to this model are found in endospore-forming Gram-positive bacteria. Surprisingly, a sequence from the Cyanobacterium-like (and presumably non-spore-forming) photosynthesizer Heliobacillus mobilis is homologous, and scores between the trusted and noise cutoffs.
Probab=37.51 E-value=5.9e+02 Score=28.57 Aligned_cols=10 Identities=20% Similarity=0.521 Sum_probs=4.7
Q ss_pred HHHHHHhhcC
Q psy15864 502 RDIEEHFADK 511 (553)
Q Consensus 502 eei~~~f~~~ 511 (553)
+++.+.|.++
T Consensus 394 ~~~p~~~~~~ 403 (764)
T TIGR02865 394 SKLPDEFERK 403 (764)
T ss_pred hhhhHHHHHh
Confidence 4555555433
No 359
>PRK13629 threonine/serine transporter TdcC; Provisional
Probab=37.50 E-value=4.8e+02 Score=26.92 Aligned_cols=43 Identities=9% Similarity=-0.101 Sum_probs=27.1
Q ss_pred cccccchhchhhhhHHHHHHHHHhhccccchHHHHHHHHHHHHH
Q psy15864 113 PHLRGMLSATASMTTIFGTVSQLFLGSFLHWRSAAILNLLFPIL 156 (553)
Q Consensus 113 ~~~Rg~~~~~~~~~~~lG~~l~~~l~~~lgWr~~f~i~~i~~li 156 (553)
....+...++++++.+.|.+.-|+..+. +|-|++.+..+++..
T Consensus 19 ~~d~~W~l~l~GTAIGAGmLfLPI~~g~-~Gf~p~lillll~~p 61 (443)
T PRK13629 19 KSDTTWTLGLFGTAIGAGVLFFPIRAGF-GGLIPILLMLVLAYP 61 (443)
T ss_pred cccchHHHHHHHHHHhHHHHHHHHHHhc-chHHHHHHHHHHHHH
Confidence 3455677777888888888877776655 455555444444433
No 360
>KOG2505|consensus
Probab=36.81 E-value=64 Score=33.01 Aligned_cols=7 Identities=57% Similarity=0.591 Sum_probs=2.7
Q ss_pred CCccccc
Q psy15864 2 DSSTKHQ 8 (553)
Q Consensus 2 ~~~~~~~ 8 (553)
|.+.++.
T Consensus 455 Dp~~kd~ 461 (591)
T KOG2505|consen 455 DPSTKDG 461 (591)
T ss_pred Cchhccc
Confidence 3333333
No 361
>KOG0112|consensus
Probab=36.26 E-value=48 Score=36.40 Aligned_cols=8 Identities=13% Similarity=0.019 Sum_probs=3.4
Q ss_pred hhhccCcc
Q psy15864 107 VAEITQPH 114 (553)
Q Consensus 107 i~e~~p~~ 114 (553)
..+.+|.+
T Consensus 812 ~~~~~ps~ 819 (975)
T KOG0112|consen 812 KTSEFPSH 819 (975)
T ss_pred eccccchh
Confidence 34444443
No 362
>PF13829 DUF4191: Domain of unknown function (DUF4191)
Probab=36.06 E-value=33 Score=31.29 Aligned_cols=70 Identities=14% Similarity=0.103 Sum_probs=34.2
Q ss_pred hchhhhhHHHHHHHHHhh-ccccchHHHHHHHHHHHHHHHHHhcc--ccCCceeeeecCChHHHHHHHHHHcC
Q psy15864 120 SATASMTTIFGTVSQLFL-GSFLHWRSAAILNLLFPILALCALYF--IPESPHWLISQGRMQEASASLCWLRG 189 (553)
Q Consensus 120 ~~~~~~~~~lG~~l~~~l-~~~lgWr~~f~i~~i~~li~~i~~~~--lpEsp~~l~~~~~~~~a~~~l~~~~~ 189 (553)
..++.++..++.++..++ +.++++.|.+++.+++..+++.++.| --|...|-...++...+..++..+++
T Consensus 27 l~~~ml~a~l~~~~v~v~ig~l~~~~~~~~i~gi~~g~l~am~vl~rra~ra~Y~qieGqpGAa~avL~~lr~ 99 (224)
T PF13829_consen 27 LPWLMLGAFLGPIAVFVLIGLLFGSWWYWLIIGILLGLLAAMIVLSRRAQRAAYAQIEGQPGAAGAVLDNLRR 99 (224)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHhhcC
Confidence 344444444444443333 33336567777766665544433333 22333343344555566666666543
No 363
>PRK14223 camphor resistance protein CrcB; Provisional
Probab=35.60 E-value=2.5e+02 Score=23.02 Aligned_cols=19 Identities=11% Similarity=-0.078 Sum_probs=10.1
Q ss_pred HHhhhhccccceeecccccc
Q psy15864 345 LTHICIRLLPWMLIGEVFPN 364 (553)
Q Consensus 345 ~~~~~~~~~~~~~~~e~~p~ 364 (553)
++..++.+.. ++..|.+.-
T Consensus 69 Gf~GgfTTFS-Tf~~e~~~l 87 (122)
T PRK14223 69 GFCGALTTFS-TFSYETFSL 87 (122)
T ss_pred hHccccccHH-HHHHHHHHH
Confidence 3334444444 666777643
No 364
>PRK14199 camphor resistance protein CrcB; Provisional
Probab=35.38 E-value=2.6e+02 Score=23.16 Aligned_cols=16 Identities=6% Similarity=-0.132 Sum_probs=8.5
Q ss_pred hhhccccceeecccccc
Q psy15864 348 ICIRLLPWMLIGEVFPN 364 (553)
Q Consensus 348 ~~~~~~~~~~~~e~~p~ 364 (553)
.++.+.. ++..|.+.-
T Consensus 78 GgfTTFS-Tf~~E~~~l 93 (128)
T PRK14199 78 GGLTTFS-TFSYETINL 93 (128)
T ss_pred cccccHH-HHHHHHHHH
Confidence 4444443 666676543
No 365
>PRK14200 camphor resistance protein CrcB; Provisional
Probab=35.35 E-value=2.6e+02 Score=23.14 Aligned_cols=16 Identities=0% Similarity=-0.160 Sum_probs=8.1
Q ss_pred hhhhccccceeeccccc
Q psy15864 347 HICIRLLPWMLIGEVFP 363 (553)
Q Consensus 347 ~~~~~~~~~~~~~e~~p 363 (553)
..++.+.. ++..|...
T Consensus 77 ~GgfTTFS-Tf~~E~~~ 92 (127)
T PRK14200 77 LGALTTFS-TFSMDNVL 92 (127)
T ss_pred hccchhHH-HHHHHHHH
Confidence 33444443 66666654
No 366
>PF05313 Pox_P21: Poxvirus P21 membrane protein; InterPro: IPR007977 The p21 membrane protein of vaccinia virus, encoded by the A17L (or A18L) gene, has been reported to localise on the inner of the two membranes of the intracellular mature virus (IMV). It has also been shown that p21 acts as a membrane anchor for the externally located fusion protein P14 (A27L gene) [].; GO: 0016021 integral to membrane
Probab=35.12 E-value=2.5e+02 Score=24.58 Aligned_cols=18 Identities=11% Similarity=-0.025 Sum_probs=9.4
Q ss_pred ccchhhhhhhHHHHHHHH
Q psy15864 363 PNNIRATASGASGSSSYI 380 (553)
Q Consensus 363 p~~~Rg~~~~~~~~~~~~ 380 (553)
|.+.+.+++++.-.+..+
T Consensus 111 ~~~~~~~gMsIvcv~~Si 128 (189)
T PF05313_consen 111 PGANNNVGMSIVCVIMSI 128 (189)
T ss_pred CCCcceehhHHHHHHHHH
Confidence 444555666655444444
No 367
>PF15628 RRM_DME: RRM in Demeter
Probab=34.95 E-value=25 Score=27.16 Aligned_cols=17 Identities=18% Similarity=0.221 Sum_probs=14.9
Q ss_pred CCCCCCHHHHHHHhhcC
Q psy15864 495 ETEGRTLRDIEEHFADK 511 (553)
Q Consensus 495 eTkg~tleei~~~f~~~ 511 (553)
=|||.|.||||+.|.+.
T Consensus 62 IfrGls~~eIq~cF~~G 78 (103)
T PF15628_consen 62 IFRGLSREEIQQCFWKG 78 (103)
T ss_pred HhcccCHHHHHHHHhcC
Confidence 47999999999999765
No 368
>KOG3809|consensus
Probab=34.53 E-value=9.5 Score=37.71 Aligned_cols=17 Identities=47% Similarity=0.517 Sum_probs=11.0
Q ss_pred ccccccCCCCCCCcchh
Q psy15864 4 STKHQIGTFTEPTPLDW 20 (553)
Q Consensus 4 ~~~~~~~~~~~~~~~~~ 20 (553)
|+-||+|..-+.+|...
T Consensus 123 siVdqV~~ge~KtpltL 139 (583)
T KOG3809|consen 123 SIVDQVGTGEEKTPLTL 139 (583)
T ss_pred HHHHHhhcccccCcccc
Confidence 45577888777666543
No 369
>TIGR00927 2A1904 K+-dependent Na+/Ca+ exchanger.
Probab=34.28 E-value=1.1e+02 Score=34.38 Aligned_cols=26 Identities=19% Similarity=0.203 Sum_probs=10.5
Q ss_pred HHHHHHHHHhhhhcccCCcceeecch
Q psy15864 282 AELGGALLCVVLIHYTGKRPLALIST 307 (553)
Q Consensus 282 ~~~~g~~~~g~l~dr~Grr~~l~~~~ 307 (553)
+.-+.=++...++-|-|.-.+.+..+
T Consensus 978 GTSIPDlisSvivArkG~gdMAVan~ 1003 (1096)
T TIGR00927 978 GTSIPDLITSVIVARKGLGDMAVSSS 1003 (1096)
T ss_pred hcccHHHHHHHHHHHccCCcceeeec
Confidence 33333333334444445444444333
No 370
>PF14235 DUF4337: Domain of unknown function (DUF4337)
Probab=34.26 E-value=2.2e+02 Score=24.61 Aligned_cols=41 Identities=5% Similarity=0.021 Sum_probs=20.0
Q ss_pred cccchhchhhhhHHHHHHHHHhhccccchHHHHHHHHHHHHHHHHH
Q psy15864 115 LRGMLSATASMTTIFGTVSQLFLGSFLHWRSAAILNLLFPILALCA 160 (553)
Q Consensus 115 ~Rg~~~~~~~~~~~lG~~l~~~l~~~lgWr~~f~i~~i~~li~~i~ 160 (553)
+-+.+..+++++..++.+-. ..+=+|++++..+++++.+++
T Consensus 112 ~f~~a~~~lQIaI~Lasit~-----Lt~~~~l~~~~~~~g~~G~~~ 152 (157)
T PF14235_consen 112 RFDLAVALLQIAIVLASITA-----LTKKKWLWYASLGLGAVGVAF 152 (157)
T ss_pred hhHHHHHHHHHHHHHHHHHH-----HHHhHHHHHHHHHHHHHHHHH
Confidence 34455555555554444311 124456666666665555443
No 371
>PRK14234 camphor resistance protein CrcB; Provisional
Probab=34.00 E-value=2.7e+02 Score=22.91 Aligned_cols=16 Identities=0% Similarity=-0.132 Sum_probs=8.2
Q ss_pred hhhhccccceeeccccc
Q psy15864 347 HICIRLLPWMLIGEVFP 363 (553)
Q Consensus 347 ~~~~~~~~~~~~~e~~p 363 (553)
..++.+.. ++..|.+.
T Consensus 75 ~GgfTTFS-Tf~~e~~~ 90 (124)
T PRK14234 75 LGGLTTFS-SFSLDTLR 90 (124)
T ss_pred ccccchHH-HHHHHHHH
Confidence 34444443 66666653
No 372
>KOG2601|consensus
Probab=33.68 E-value=4.4e+02 Score=26.68 Aligned_cols=40 Identities=10% Similarity=-0.008 Sum_probs=22.1
Q ss_pred hHHHHHHHHHHHHHHHHhHHHHhhccchhhHHHHHHHHHH
Q psy15864 372 GASGSSSYIFAFAVNKLYYPMLDTFHLWGTLYFYAAISVV 411 (553)
Q Consensus 372 ~~~~~~~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~~~~~ 411 (553)
+..-..-.....+.|.+.|.++...+......++++...+
T Consensus 178 atir~iDq~tn~Lapv~tg~Iitfvsl~~~~g~f~~w~~v 217 (503)
T KOG2601|consen 178 ATIRGIDQSTNLLAPVITGLIITFVSLRASAGTFAAWALV 217 (503)
T ss_pred hhhhhhhhhhhchhhhhhcccceeechhhhhhhhHHHHHH
Confidence 3334445566777888888777655544434444443333
No 373
>PF10131 PTPS_related: 6-pyruvoyl-tetrahydropterin synthase related domain; membrane protein; InterPro: IPR018776 This entry is found in various bacterial and archaeal hypothetical membrane proteins, as well as in tetratricopeptide TPR_2 repeat protein. Its function has not yet been established, though it shows similarity to 6-pyruvoyl-tetrahydropterin synthase.
Probab=33.47 E-value=4.3e+02 Score=28.70 Aligned_cols=20 Identities=30% Similarity=0.190 Sum_probs=9.3
Q ss_pred HHHHHHHHHhhhhcccCCcc
Q psy15864 282 AELGGALLCVVLIHYTGKRP 301 (553)
Q Consensus 282 ~~~~g~~~~g~l~dr~Grr~ 301 (553)
+.+++++..-++..++++|.
T Consensus 33 ~~~l~~~~~Y~~~R~~~~~~ 52 (616)
T PF10131_consen 33 AFFLGGLGMYFLGRRLGRRK 52 (616)
T ss_pred HHHHHHHHHHHHHHHhcchh
Confidence 33334444444555566543
No 374
>PF06912 DUF1275: Protein of unknown function (DUF1275); InterPro: IPR010699 This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although a few members are thought to be membrane proteins.
Probab=32.77 E-value=3.7e+02 Score=24.21 Aligned_cols=19 Identities=26% Similarity=0.247 Sum_probs=11.7
Q ss_pred HHHHHHHHHHHHHHHHhhh
Q psy15864 275 ATLLLGVAELGGALLCVVL 293 (553)
Q Consensus 275 ~~~~~~i~~~~g~~~~g~l 293 (553)
......++.++|+++++.+
T Consensus 51 ~~~~~i~~F~~G~~~~~~i 69 (209)
T PF06912_consen 51 RYLLAILSFILGAFLAGLI 69 (209)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 3344445566777777777
No 375
>PRK14226 camphor resistance protein CrcB; Provisional
Probab=32.72 E-value=2.9e+02 Score=22.94 Aligned_cols=16 Identities=0% Similarity=-0.105 Sum_probs=8.0
Q ss_pred hhhhccccceeeccccc
Q psy15864 347 HICIRLLPWMLIGEVFP 363 (553)
Q Consensus 347 ~~~~~~~~~~~~~e~~p 363 (553)
..++.+.. ++..|.+.
T Consensus 78 lGgfTTFS-Tf~~e~~~ 93 (130)
T PRK14226 78 LGGFTTFS-SFSLDILN 93 (130)
T ss_pred ccccccHH-HHHHHHHH
Confidence 34444443 66666554
No 376
>PRK14227 camphor resistance protein CrcB; Provisional
Probab=32.24 E-value=2.9e+02 Score=22.73 Aligned_cols=16 Identities=6% Similarity=-0.058 Sum_probs=8.3
Q ss_pred hhhhccccceeeccccc
Q psy15864 347 HICIRLLPWMLIGEVFP 363 (553)
Q Consensus 347 ~~~~~~~~~~~~~e~~p 363 (553)
..++.+.. ++..|.+.
T Consensus 74 ~GgfTTFS-Tf~~E~~~ 89 (124)
T PRK14227 74 CGSFTTFS-SFTYETIA 89 (124)
T ss_pred hcccccHH-HHHHHHHH
Confidence 34444443 66667654
No 377
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=32.24 E-value=3.6e+02 Score=24.36 Aligned_cols=111 Identities=7% Similarity=0.020 Sum_probs=0.0
Q ss_pred chhHHHHHHHHHHHHHHhhc-ccCCCCChhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHHH
Q psy15864 306 STGGSAACFIVVAVYAQFHL-SYGWDSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFA 384 (553)
Q Consensus 306 ~~~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i 384 (553)
++++.++.+++.++...+.. .........+++..++.|+++....--+...--..--+.-.+....++...+.+++.++
T Consensus 86 ~L~~~~if~~~~gi~~~f~~~~~~~~gi~tli~~~i~~G~~~~~~~~~i~~~~~~~~r~~~~k~~~~~~~~~~~w~~~~~ 165 (206)
T PF06570_consen 86 SLLFFGIFSLLFGIMGFFSPKNSNQYGIITLILVSIVGGLVFYFIFKYIYPYKKKKKRPSWWKYILISVLAMVLWIVIFV 165 (206)
T ss_pred HHHHHHHHHHHHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHHHhcccccccccHHHHHHHHHHHHHHHHHHHHH
Q ss_pred HHHHhHHHHhhccchhhHHHHHHHHHHHHhhh
Q psy15864 385 VNKLYYPMLDTFHLWGTLYFYAAISVVGTLYM 416 (553)
Q Consensus 385 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 416 (553)
...+.+..+...-.++..++++++..++-...
T Consensus 166 ~~~~lp~~inp~l~~~~~iiig~i~~~~~~~l 197 (206)
T PF06570_consen 166 LTSFLPPVINPVLPPWVYIIIGVIAFALRFYL 197 (206)
T ss_pred HHHHccccCCcCCCHHHHHHHHHHHHHHHHHH
No 378
>PF12273 RCR: Chitin synthesis regulation, resistance to Congo red; InterPro: IPR020999 RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 [].
Probab=31.60 E-value=19 Score=29.91 Aligned_cols=18 Identities=22% Similarity=0.229 Sum_probs=10.1
Q ss_pred HHHHHHHHHHHHHHHHHh
Q psy15864 144 RSAAILNLLFPILALCAL 161 (553)
Q Consensus 144 r~~f~i~~i~~li~~i~~ 161 (553)
||++++..|+++++++++
T Consensus 1 RW~l~~iii~~i~l~~~~ 18 (130)
T PF12273_consen 1 RWVLFAIIIVAILLFLFL 18 (130)
T ss_pred CeeeHHHHHHHHHHHHHH
Confidence 566666655555554443
No 379
>COG0534 NorM Na+-driven multidrug efflux pump [Defense mechanisms]
Probab=31.30 E-value=6e+02 Score=26.32 Aligned_cols=27 Identities=15% Similarity=0.064 Sum_probs=16.1
Q ss_pred HHHHHHHHHHHHHHHHhhhhcccCCcc
Q psy15864 275 ATLLLGVAELGGALLCVVLIHYTGKRP 301 (553)
Q Consensus 275 ~~~~~~i~~~~g~~~~g~l~dr~Grr~ 301 (553)
...+..+...++.-....++.++|++.
T Consensus 62 ~~~~~~~~~gl~~g~~~liaq~~Ga~~ 88 (455)
T COG0534 62 FFLIIAIFIGLGTGTTVLVAQAIGAGD 88 (455)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHcCCc
Confidence 334444555555556667777788654
No 380
>PF04281 Tom22: Mitochondrial import receptor subunit Tom22 ; InterPro: IPR005683 The mitochondrial protein translocase family, which is responsible for movement of nuclear encoded pre-proteins into mitochondria, is very complex with at least 19 components. These proteins include several chaperone proteins, four proteins of the outer membrane translocase (Tom) import receptor, five proteins of the Tom channel complex, five proteins of the inner membrane translocase (Tim) and three "motor" proteins. This family represents the Tom22 proteins []. The N-terminal region of Tom22 has been shown to have chaperone-like activity, and the C-terminal region faces the intermembrane face []. ; GO: 0006886 intracellular protein transport, 0005741 mitochondrial outer membrane
Probab=31.06 E-value=1.2e+02 Score=25.48 Aligned_cols=23 Identities=22% Similarity=0.442 Sum_probs=16.8
Q ss_pred eccccccchhhhhhhHHHHHHHH
Q psy15864 358 IGEVFPNNIRATASGASGSSSYI 380 (553)
Q Consensus 358 ~~e~~p~~~Rg~~~~~~~~~~~~ 380 (553)
+.|++|+..|....+........
T Consensus 60 Lkdi~P~~~R~~i~~~~~~~~~~ 82 (137)
T PF04281_consen 60 LKDIFPPSVRNWISSTVSTTSSA 82 (137)
T ss_pred HhccCCHHHHHHHHHHHHHHHHH
Confidence 36999999999877666554443
No 381
>PRK14218 camphor resistance protein CrcB; Provisional
Probab=30.98 E-value=3.2e+02 Score=22.84 Aligned_cols=15 Identities=13% Similarity=0.060 Sum_probs=7.3
Q ss_pred hhhccccceeeccccc
Q psy15864 348 ICIRLLPWMLIGEVFP 363 (553)
Q Consensus 348 ~~~~~~~~~~~~e~~p 363 (553)
.++.+.. ++..|.+.
T Consensus 81 GgfTTFS-Tf~~E~~~ 95 (133)
T PRK14218 81 GGLTTFS-SLMMECLV 95 (133)
T ss_pred chhccHH-HHHHHHHH
Confidence 3443443 55566553
No 382
>COG3389 Uncharacterized protein conserved in archaea [Function unknown]
Probab=30.96 E-value=4.2e+02 Score=24.30 Aligned_cols=29 Identities=14% Similarity=-0.045 Sum_probs=20.0
Q ss_pred HHHHHHHHHHHHHHhhhhcccCCcceeec
Q psy15864 277 LLLGVAELGGALLCVVLIHYTGKRPLALI 305 (553)
Q Consensus 277 ~~~~i~~~~g~~~~g~l~dr~Grr~~l~~ 305 (553)
+....+.+++......++-|+|||+++-.
T Consensus 35 s~yyfv~Il~atlfill~Ik~~~kwI~r~ 63 (277)
T COG3389 35 SVYYFVYILVATLFILLAIKLGRKWIFRG 63 (277)
T ss_pred ceeeehhHHHHHHHHHhheeecceeeehh
Confidence 34445556666666778889999987655
No 383
>KOG0055|consensus
Probab=30.83 E-value=3.2e+02 Score=32.00 Aligned_cols=21 Identities=33% Similarity=0.654 Sum_probs=16.0
Q ss_pred cchHHHHHHHHHHHHHHHHHh
Q psy15864 141 LHWRSAAILNLLFPILALCAL 161 (553)
Q Consensus 141 lgWr~~f~i~~i~~li~~i~~ 161 (553)
.+||...++.+...++++...
T Consensus 806 ~~W~lalv~la~~Pll~~~~~ 826 (1228)
T KOG0055|consen 806 YGWRLALVVLATFPLLILSGY 826 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 399999988888777765543
No 384
>TIGR00986 3a0801s05tom22 mitochondrial import receptor subunit Tom22. translocase (Tom) import receptor, five proteins of the Tom channel complex, five proteins of the inner membrane translocase (Tim) and three "motor" proteins. This family is specific for the Tom22 proteins.
Probab=30.34 E-value=86 Score=26.33 Aligned_cols=31 Identities=26% Similarity=0.244 Sum_probs=22.0
Q ss_pred hhhhhccCcccccchhchhhhhHHHHHHHHH
Q psy15864 105 TYVAEITQPHLRGMLSATASMTTIFGTVSQL 135 (553)
Q Consensus 105 ~~i~e~~p~~~Rg~~~~~~~~~~~lG~~l~~ 135 (553)
.-+.|++|+..|..+.+.+........-+..
T Consensus 56 ~ALkDm~Pp~~R~~i~~~~s~t~s~~ks~~s 86 (145)
T TIGR00986 56 YALKDIVPPTTRGWIYHKYSTTTNFVKSTLS 86 (145)
T ss_pred HHHHhhCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3468999999999888877766555444333
No 385
>KOG4255|consensus
Probab=30.23 E-value=5.2e+02 Score=25.53 Aligned_cols=81 Identities=10% Similarity=-0.025 Sum_probs=34.4
Q ss_pred ecchhHHHHHHHHHHHHHHhh-cccCCCCChhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHH
Q psy15864 304 LISTGGSAACFIVVAVYAQFH-LSYGWDSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFA 382 (553)
Q Consensus 304 ~~~~~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~ 382 (553)
++-+....++.++++++.... ...+....|.++...+...+.-.... .....+++..-|.-.|+. +.+.-.+
T Consensus 83 f~ll~~a~v~~l~laflW~~ts~V~g~~hS~afl~L~F~LAivdc~Sn-VtFLPFMs~lpp~fL~af------FvG~GLS 155 (439)
T KOG4255|consen 83 FVLLLLACVCQLGLAFLWHDTSPVFGALHSWAFLSLLFGLAIVDCTSN-VTFLPFMSQLPPAFLNAF------FVGMGLS 155 (439)
T ss_pred hHHHHHHHHHHHHHHHHHhcchhhhcCcchHHHHHHHHHHHHHHhhcc-chhhhhhhhCChHHHHHH------HHhccHH
Confidence 333333355555555432210 11123455666665555554432222 222245555444444432 3333334
Q ss_pred HHHHHHhHH
Q psy15864 383 FAVNKLYYP 391 (553)
Q Consensus 383 ~i~~~~~~~ 391 (553)
.+.|.+...
T Consensus 156 aLlPsllaL 164 (439)
T KOG4255|consen 156 ALLPSLLAL 164 (439)
T ss_pred HHHHHHHHH
Confidence 455555443
No 386
>COG4708 Predicted membrane protein [Function unknown]
Probab=29.62 E-value=2e+02 Score=24.09 Aligned_cols=27 Identities=15% Similarity=0.208 Sum_probs=21.9
Q ss_pred HHHHHHHHHHHHHHHHhhhhcccCCcc
Q psy15864 275 ATLLLGVAELGGALLCVVLIHYTGKRP 301 (553)
Q Consensus 275 ~~~~~~i~~~~g~~~~g~l~dr~Grr~ 301 (553)
.....+++.++...+++.+.|++|+|.
T Consensus 139 tw~tta~gEfvsl~vg~~~m~kl~kr~ 165 (169)
T COG4708 139 TWFTTALGEFVSLYVGALIMDKLGKRI 165 (169)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHhhh
Confidence 344567888999999999999999875
No 387
>PRK14222 camphor resistance protein CrcB; Provisional
Probab=29.24 E-value=3.1e+02 Score=22.48 Aligned_cols=15 Identities=13% Similarity=0.058 Sum_probs=7.9
Q ss_pred hhhccccceeeccccc
Q psy15864 348 ICIRLLPWMLIGEVFP 363 (553)
Q Consensus 348 ~~~~~~~~~~~~e~~p 363 (553)
.++.+.. ++..|.+.
T Consensus 75 GgfTTFS-Tf~~E~~~ 89 (124)
T PRK14222 75 GGLTTFS-TFSYETFR 89 (124)
T ss_pred ccchhHH-HHHHHHHH
Confidence 3444443 66667653
No 388
>PRK14229 camphor resistance protein CrcB; Provisional
Probab=28.82 E-value=2.2e+02 Score=22.76 Aligned_cols=16 Identities=13% Similarity=-0.029 Sum_probs=8.5
Q ss_pred hhhhccccceeeccccc
Q psy15864 347 HICIRLLPWMLIGEVFP 363 (553)
Q Consensus 347 ~~~~~~~~~~~~~e~~p 363 (553)
..++.+.. ++..|.+.
T Consensus 64 ~GgfTTFS-Tf~~e~~~ 79 (108)
T PRK14229 64 CGGLTTFS-TLNDELQR 79 (108)
T ss_pred ccccccHH-HHHHHHHH
Confidence 34444443 66667654
No 389
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=28.80 E-value=5.2e+02 Score=24.62 Aligned_cols=33 Identities=15% Similarity=0.110 Sum_probs=23.4
Q ss_pred hccchhhHHHHHHHHHHHHhhheEEcccCCCCC
Q psy15864 395 TFHLWGTLYFYAAISVVGTLYMYFVMPETEGRT 427 (553)
Q Consensus 395 ~~g~~~~~~~~~~~~~~~~~~~~~~~pet~~~~ 427 (553)
..|....|.+.....++..+...+++.|.|.++
T Consensus 218 ~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~k 250 (269)
T PF06800_consen 218 KNGVATAFTLSQLGVVISTLGGIFILKEKKTKK 250 (269)
T ss_pred hccchhhhhHHhHHHHHHHhhhheEEEecCchh
Confidence 445555666666667777777888999987654
No 390
>COG4232 Thiol:disulfide interchange protein [Posttranslational modification, protein turnover, chaperones / Energy production and conversion]
Probab=28.66 E-value=7.4e+02 Score=26.41 Aligned_cols=24 Identities=8% Similarity=0.083 Sum_probs=9.9
Q ss_pred hhhhcchhHHHHHHHHHHHHhhhh
Q psy15864 228 YMRRTFLLPYAIVTSLFFIGQFGG 251 (553)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~ 251 (553)
.+..++....+.+.++.+...+++
T Consensus 241 qLQ~P~vl~~la~lf~llALSMfG 264 (569)
T COG4232 241 QLQQPWVLGGLAALFVLLALSMFG 264 (569)
T ss_pred hHcccHHHHHHHHHHHHHHHHhhh
Confidence 344444443344444444444433
No 391
>PF12832 MFS_1_like: MFS_1 like family
Probab=28.53 E-value=2.4e+02 Score=20.75 Aligned_cols=40 Identities=13% Similarity=0.133 Sum_probs=29.6
Q ss_pred hhhhhHHHHHHHHHHHHHHHHhHHHHhhccchhhHHHHHH
Q psy15864 368 ATASGASGSSSYIFAFAVNKLYYPMLDTFHLWGTLYFYAA 407 (553)
Q Consensus 368 g~~~~~~~~~~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~ 407 (553)
..-+|+...+..+..++++++.+.+.|..+........+.
T Consensus 34 ~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~ 73 (77)
T PF12832_consen 34 PSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSL 73 (77)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHH
Confidence 3455677777888889999999999998886655554443
No 392
>PF03547 Mem_trans: Membrane transport protein; InterPro: IPR004776 This entry represents a mostly uncharacterised family of membrane transport proteins found in eukaryotes, bacteria and archaea. Most characterised members of this family are the PIN components of auxin efflux systems from plants. These carriers are saturable, auxin-specific, and localized to the basal ends of auxin transport-competent cells [, ]. Plants typically posses several of these proteins, each displaying a unique tissue-specific expression pattern. They are expressed in almost all plant tissues including vascular tissues and roots, and influence many processes including the establishment of embryonic polarity, plant growth, apical hook formation in seedlings and the photo- and gravitrophic responses. These plant proteins are typically 600-700 amino acyl residues long and exhibit 8-12 transmembrane segments.; GO: 0055085 transmembrane transport, 0016021 integral to membrane
Probab=28.08 E-value=73 Score=32.11 Aligned_cols=14 Identities=14% Similarity=-0.124 Sum_probs=6.3
Q ss_pred HHHHHHHhhhhccc
Q psy15864 284 LGGALLCVVLIHYT 297 (553)
Q Consensus 284 ~~g~~~~g~l~dr~ 297 (553)
++..++.|+++.|.
T Consensus 9 i~~ii~~G~~~~~~ 22 (385)
T PF03547_consen 9 IFLIILLGYLLGRF 22 (385)
T ss_pred HHHHHHHHHHHHHh
Confidence 33344444554443
No 393
>PRK14198 camphor resistance protein CrcB; Provisional
Probab=28.04 E-value=3.4e+02 Score=22.29 Aligned_cols=15 Identities=0% Similarity=-0.285 Sum_probs=7.5
Q ss_pred hhhccccceeeccccc
Q psy15864 348 ICIRLLPWMLIGEVFP 363 (553)
Q Consensus 348 ~~~~~~~~~~~~e~~p 363 (553)
.++.+.. ++..|...
T Consensus 74 GgfTTFS-Tf~~e~~~ 88 (124)
T PRK14198 74 GGYTTFS-AFSLDAAL 88 (124)
T ss_pred cccccHH-HHHHHHHH
Confidence 3444443 56666653
No 394
>KOG1277|consensus
Probab=27.81 E-value=79 Score=32.06 Aligned_cols=38 Identities=16% Similarity=0.224 Sum_probs=24.3
Q ss_pred hhhhhhhhccCcccccchhchhhhhHHHHHHHHHhhcccc
Q psy15864 102 LVLTYVAEITQPHLRGMLSATASMTTIFGTVSQLFLGSFL 141 (553)
Q Consensus 102 ~~~~~i~e~~p~~~Rg~~~~~~~~~~~lG~~l~~~l~~~l 141 (553)
+..+++.+.++. ||...+.....+++-..+.+-.++.+
T Consensus 313 i~~Alvg~fy~~--rGal~saaI~vYAlTs~i~GY~~gs~ 350 (593)
T KOG1277|consen 313 IMLALVGVFYTE--RGALLSAAIVVYALTSPINGYVSGSF 350 (593)
T ss_pred HHHHHHhhhhcc--chHHHHHHHHHHHhccccccccccee
Confidence 344777888875 88877777666666555554444433
No 395
>COG0670 Integral membrane protein, interacts with FtsH [General function prediction only]
Probab=27.44 E-value=5.1e+02 Score=24.08 Aligned_cols=9 Identities=33% Similarity=0.737 Sum_probs=3.4
Q ss_pred HHHHHHHHH
Q psy15864 281 VAELGGALL 289 (553)
Q Consensus 281 i~~~~g~~~ 289 (553)
+..+.+.+.
T Consensus 66 ~a~l~~~~~ 74 (233)
T COG0670 66 IAGLAGVFF 74 (233)
T ss_pred HHHHHHHHH
Confidence 333333333
No 396
>PRK01862 putative voltage-gated ClC-type chloride channel ClcB; Provisional
Probab=27.43 E-value=8e+02 Score=26.36 Aligned_cols=35 Identities=9% Similarity=0.052 Sum_probs=16.0
Q ss_pred hhhhhccC--cccccchhchhhhhHHHHHHHHHhhccc
Q psy15864 105 TYVAEITQ--PHLRGMLSATASMTTIFGTVSQLFLGSF 140 (553)
Q Consensus 105 ~~i~e~~p--~~~Rg~~~~~~~~~~~lG~~l~~~l~~~ 140 (553)
..+++++. +++| +..-...++..++.+....+++.
T Consensus 150 ~~~~~~~~~~~~~~-r~l~~~G~aAglaa~F~aPl~g~ 186 (574)
T PRK01862 150 SLVGRFAHFDPPRL-RLLVACGAAAGITSAYNAPIAGA 186 (574)
T ss_pred HHHHHHhCCCHHHH-HHHHHHHHHHHHHHHhCCchHHH
Confidence 44555543 2222 23333445555555555555544
No 397
>COG2836 Uncharacterized conserved protein [Function unknown]
Probab=27.12 E-value=5e+02 Score=23.90 Aligned_cols=31 Identities=13% Similarity=0.173 Sum_probs=22.1
Q ss_pred CCCCChHHHHHHHHHHHHHHHHHHhhhhccc
Q psy15864 267 HAPLDPYFATLLLGVAELGGALLCVVLIHYT 297 (553)
Q Consensus 267 g~~~~~~~~~~~~~i~~~~g~~~~g~l~dr~ 297 (553)
+...+.....+.++++.+...+..|..++++
T Consensus 161 gS~~~Gal~mlaFGlGTlP~ll~~G~~s~~~ 191 (232)
T COG2836 161 GSAFEGALVMLAFGLGTLPNLLAMGIFSSKL 191 (232)
T ss_pred CCHHHHHHHHHHHhhcccHHHHHHHHHHHHH
Confidence 4334455777788888888888778777765
No 398
>PRK14232 camphor resistance protein CrcB; Provisional
Probab=27.11 E-value=2.4e+02 Score=23.02 Aligned_cols=16 Identities=13% Similarity=0.015 Sum_probs=8.3
Q ss_pred hhhhccccceeeccccc
Q psy15864 347 HICIRLLPWMLIGEVFP 363 (553)
Q Consensus 347 ~~~~~~~~~~~~~e~~p 363 (553)
..++.+.. ++..|.+.
T Consensus 68 ~GgfTTFS-Tf~~e~~~ 83 (120)
T PRK14232 68 LGAYTTFS-TFMYEGFN 83 (120)
T ss_pred cccchhHH-HHHHHHHH
Confidence 34444443 66667654
No 399
>PRK14215 camphor resistance protein CrcB; Provisional
Probab=27.10 E-value=3.6e+02 Score=22.23 Aligned_cols=16 Identities=6% Similarity=-0.112 Sum_probs=8.6
Q ss_pred hhhhccccceeeccccc
Q psy15864 347 HICIRLLPWMLIGEVFP 363 (553)
Q Consensus 347 ~~~~~~~~~~~~~e~~p 363 (553)
..++.+.. ++..|.+.
T Consensus 74 ~GgfTTFS-Tf~~E~~~ 89 (126)
T PRK14215 74 LGGFTTFS-TFGYESYS 89 (126)
T ss_pred hcccccHH-HHHHHHHH
Confidence 34444443 66667653
No 400
>PF03616 Glt_symporter: Sodium/glutamate symporter; InterPro: IPR004445 This is a family of sodium/glutamate symporters (glutamate permeases), which catalyse the sodium-dependent uptake of extracellular glutamate. The protein is located in the inner membrane.; GO: 0015501 glutamate:sodium symporter activity, 0015813 L-glutamate transport, 0016021 integral to membrane
Probab=26.86 E-value=6.6e+02 Score=25.22 Aligned_cols=47 Identities=13% Similarity=0.051 Sum_probs=21.4
Q ss_pred hhhHHHHhhHHHHHHhhCCCCChHHHHHHHHHHHHHHHHHHhhhhcc
Q psy15864 250 GGMTTLQTYAVGIFESIHAPLDPYFATLLLGVAELGGALLCVVLIHY 296 (553)
Q Consensus 250 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~g~~~~g~l~dr 296 (553)
.+......+.+.+-+..|.............+|.+.|.+++++++.+
T Consensus 135 GGhGTAaa~g~~fe~~~G~~~a~~vg~a~AT~Glv~G~liGgpi~~~ 181 (368)
T PF03616_consen 135 GGHGTAAAFGPTFEELYGWEGATSVGMAAATFGLVVGGLIGGPIANW 181 (368)
T ss_pred CCccHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444445555554434654433333333344444455555554443
No 401
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=26.80 E-value=1.1e+02 Score=23.24 Aligned_cols=60 Identities=17% Similarity=0.106 Sum_probs=29.2
Q ss_pred chhhhhhhhhcc-CcccccchhchhhhhHHHHHHHHHhhccccchHHHHHHHHHHHHHHHH
Q psy15864 100 LVLVLTYVAEIT-QPHLRGMLSATASMTTIFGTVSQLFLGSFLHWRSAAILNLLFPILALC 159 (553)
Q Consensus 100 ~~~~~~~i~e~~-p~~~Rg~~~~~~~~~~~lG~~l~~~l~~~lgWr~~f~i~~i~~li~~i 159 (553)
.++.|.++.|.. ....-|...+....++.+|.+++..+......|..+.+..+.+++..+
T Consensus 12 TplLP~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~ 72 (85)
T PF06779_consen 12 TPLLPLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTA 72 (85)
T ss_pred HhHhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHH
Confidence 346666666643 344444444444444444444444433333445555555555544443
No 402
>PF01086 Clathrin_lg_ch: Clathrin light chain; InterPro: IPR000996 Proteins synthesized on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment. These vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transport []. Clathrin coats contain both clathrin (acts as a scaffold) and adaptor complexes that link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration. The two major types of clathrin adaptor complexes are the heterotetrameric adaptor protein (AP) complexes, and the monomeric GGA (Golgi-localising, Gamma-adaptin ear domain homology, ARF-binding proteins) adaptors [, ]. Clathrin is a trimer composed of three heavy chains and three light chains, each monomer projecting outwards like a leg; this three-legged structure is known as a triskelion [, ]. The heavy chains form the legs, their N-terminal beta-propeller regions extending outwards, while their C-terminal alpha-alpha-superhelical regions form the central hub of the triskelion. Peptide motifs can bind between the beta-propeller blades. The light chains appear to have a regulatory role, and may help orient the assembly and disassembly of clathrin coats as they interact with hsc70 uncoating ATPase []. Clathrin triskelia self-polymerise into a curved lattice by twisting individual legs together. The clathrin lattice forms around a vesicle as it buds from the TGN, plasma membrane or endosomes, acting to stabilise the vesicle and facilitate the budding process []. The multiple blades created when the triskelia polymerise are involved in multiple protein interactions, enabling the recruitment of different cargo adaptors and membrane attachment proteins []. This entry represents clathrin light chains, which are more divergent in sequence than the heavy chains []. In higher eukaryotes, two genes encode distinct but related light chains, each of which can yield two separate forms via alternative splicing. In yeast there is a single light chain whose sequence is only distantly related to that of higher eukaryotes. Clathrin light chains have a conserved acidic N-terminal domain, a central coiled-coil domain and a conserved C-terminal domain. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030130 clathrin coat of trans-Golgi network vesicle, 0030132 clathrin coat of coated pit; PDB: 3LVG_E 3LVH_D.
Probab=26.76 E-value=77 Score=29.26 Aligned_cols=7 Identities=14% Similarity=1.142 Sum_probs=3.3
Q ss_pred hhhHhhh
Q psy15864 19 DWKKAKK 25 (553)
Q Consensus 19 ~~~k~~k 25 (553)
+|+.+..
T Consensus 116 eWre~~~ 122 (225)
T PF01086_consen 116 EWREERD 122 (225)
T ss_dssp HHHHHHT
T ss_pred HHHHHHH
Confidence 4554443
No 403
>PF04281 Tom22: Mitochondrial import receptor subunit Tom22 ; InterPro: IPR005683 The mitochondrial protein translocase family, which is responsible for movement of nuclear encoded pre-proteins into mitochondria, is very complex with at least 19 components. These proteins include several chaperone proteins, four proteins of the outer membrane translocase (Tom) import receptor, five proteins of the Tom channel complex, five proteins of the inner membrane translocase (Tim) and three "motor" proteins. This family represents the Tom22 proteins []. The N-terminal region of Tom22 has been shown to have chaperone-like activity, and the C-terminal region faces the intermembrane face []. ; GO: 0006886 intracellular protein transport, 0005741 mitochondrial outer membrane
Probab=26.71 E-value=92 Score=26.10 Aligned_cols=31 Identities=26% Similarity=0.249 Sum_probs=22.3
Q ss_pred hhhhccCcccccchhchhhhhHHHHHHHHHh
Q psy15864 106 YVAEITQPHLRGMLSATASMTTIFGTVSQLF 136 (553)
Q Consensus 106 ~i~e~~p~~~Rg~~~~~~~~~~~lG~~l~~~ 136 (553)
-+.|++|+..|..+.+.+........-+...
T Consensus 59 aLkdi~P~~~R~~i~~~~~~~~~~~k~~~~~ 89 (137)
T PF04281_consen 59 ALKDIFPPSVRNWISSTVSTTSSAVKSLFSF 89 (137)
T ss_pred HHhccCCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4689999999998888877666554444333
No 404
>PRK14213 camphor resistance protein CrcB; Provisional
Probab=26.41 E-value=2.6e+02 Score=22.71 Aligned_cols=15 Identities=7% Similarity=-0.046 Sum_probs=7.9
Q ss_pred hhhccccceeeccccc
Q psy15864 348 ICIRLLPWMLIGEVFP 363 (553)
Q Consensus 348 ~~~~~~~~~~~~e~~p 363 (553)
.++.+.. ++..|.+.
T Consensus 71 GgfTTFS-Tf~~e~~~ 85 (118)
T PRK14213 71 GAFTTFS-TFSVEAVQ 85 (118)
T ss_pred cccccHH-HHHHHHHH
Confidence 3444443 66666654
No 405
>COG3448 CBS-domain-containing membrane protein [Signal transduction mechanisms]
Probab=26.09 E-value=27 Score=33.13 Aligned_cols=15 Identities=13% Similarity=0.020 Sum_probs=7.6
Q ss_pred hHHHHhhccchhhHH
Q psy15864 389 YYPMLDTFHLWGTLY 403 (553)
Q Consensus 389 ~~~~~~~~g~~~~~~ 403 (553)
.|..+...||+..++
T Consensus 140 gGpav~~~g~~F~l~ 154 (382)
T COG3448 140 GGPAVHRLGYNFVLW 154 (382)
T ss_pred cCcccccCCCCceeh
Confidence 344555666554443
No 406
>PRK14202 camphor resistance protein CrcB; Provisional
Probab=26.06 E-value=3.8e+02 Score=22.16 Aligned_cols=16 Identities=6% Similarity=-0.083 Sum_probs=8.4
Q ss_pred hhhhccccceeeccccc
Q psy15864 347 HICIRLLPWMLIGEVFP 363 (553)
Q Consensus 347 ~~~~~~~~~~~~~e~~p 363 (553)
..++.+.. ++..|.+.
T Consensus 77 ~GgfTTFS-Tf~~e~~~ 92 (128)
T PRK14202 77 CGGFTTFS-SYMYEIAA 92 (128)
T ss_pred hcccccHH-HHHHHHHH
Confidence 34444443 66667653
No 407
>PRK10697 DNA-binding transcriptional activator PspC; Provisional
Probab=26.01 E-value=3.2e+02 Score=22.31 Aligned_cols=13 Identities=8% Similarity=0.151 Sum_probs=7.8
Q ss_pred HHHhccccCCcee
Q psy15864 158 LCALYFIPESPHW 170 (553)
Q Consensus 158 ~i~~~~lpEsp~~ 170 (553)
+++++++|+.|..
T Consensus 57 i~l~~~lp~~P~~ 69 (118)
T PRK10697 57 IILSFALDPMPDN 69 (118)
T ss_pred HHHHHhccCCccc
Confidence 4455568876643
No 408
>PLN02381 valyl-tRNA synthetase
Probab=25.59 E-value=62 Score=37.62 Aligned_cols=16 Identities=13% Similarity=0.166 Sum_probs=10.8
Q ss_pred HHHhhhhcccCCccee
Q psy15864 288 LLCVVLIHYTGKRPLA 303 (553)
Q Consensus 288 ~~~g~l~dr~Grr~~l 303 (553)
++-|++.|.-|||..=
T Consensus 643 ~~hG~V~D~~G~KMSK 658 (1066)
T PLN02381 643 YLHPMIRDAHGRKMSK 658 (1066)
T ss_pred eecceEECCCCCCCCC
Confidence 4457778888887543
No 409
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=25.46 E-value=3.9e+02 Score=26.39 Aligned_cols=16 Identities=19% Similarity=0.289 Sum_probs=7.3
Q ss_pred HHHHHHHHHHHhhheE
Q psy15864 403 YFYAAISVVGTLYMYF 418 (553)
Q Consensus 403 ~~~~~~~~~~~~~~~~ 418 (553)
.+.+.++++++++++.
T Consensus 289 y~~af~lIiiG~vvy~ 304 (334)
T PF06027_consen 289 YILAFALIIIGFVVYN 304 (334)
T ss_pred HHHHHHHHHHHhheEE
Confidence 3344444444444444
No 410
>PRK10457 hypothetical protein; Provisional
Probab=25.13 E-value=1.6e+02 Score=22.20 Aligned_cols=53 Identities=13% Similarity=0.162 Sum_probs=24.8
Q ss_pred hhhhhccCcccccchhchhhhhHHHHHHHHHhhcccc------chHHHHHHHHHHHHHH
Q psy15864 105 TYVAEITQPHLRGMLSATASMTTIFGTVSQLFLGSFL------HWRSAAILNLLFPILA 157 (553)
Q Consensus 105 ~~i~e~~p~~~Rg~~~~~~~~~~~lG~~l~~~l~~~l------gWr~~f~i~~i~~li~ 157 (553)
-++++..-|.+++.-.-.......+|.+++.+++..+ +|.+.-++.++.+.+.
T Consensus 14 G~lA~~i~pg~~~~G~~~tiilGiiGA~iGg~l~~~~g~~~~~g~~~~~~i~aviGAii 72 (82)
T PRK10457 14 GILAKWIMPGKDGGGFFMTIILGIVGAVVGGWISTFFGFGKVDGFNFGSFVVAVIGAIV 72 (82)
T ss_pred HHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHHhCccccccccHHHHHHHHHHHHH
Confidence 3555555443332222223344556667776665444 3433334444444443
No 411
>PF04695 Pex14_N: Peroxisomal membrane anchor protein (Pex14p) conserved region; InterPro: IPR006785 This conserved region defines a group of peroxisomal membrane anchor proteins which bind the PTS1 (peroxisomal targeting signal) receptor and are required for the import of PTS1-containing proteins into peroxisomes. Loss of functional Pex14p results in defects in both the PTS1 and PTS2-dependent import pathways. Deletion analysis of this conserved region implicates it in selective peroxisome degradation. In the majority of members this region is situated at the N terminus of the protein [, ].; GO: 0005777 peroxisome, 0016020 membrane; PDB: 2W85_A 2W84_A 3FF5_B.
Probab=25.12 E-value=30 Score=29.04 Aligned_cols=17 Identities=29% Similarity=0.487 Sum_probs=13.4
Q ss_pred CCCCCCHHHHHHHhhcC
Q psy15864 495 ETEGRTLRDIEEHFADK 511 (553)
Q Consensus 495 eTkg~tleei~~~f~~~ 511 (553)
|.||.|-||||+.|+.-
T Consensus 31 ~sKGLt~~EI~~al~~a 47 (136)
T PF04695_consen 31 ESKGLTEEEIDEALGRA 47 (136)
T ss_dssp HHCT--HHHHHHHHHHH
T ss_pred HcCCCCHHHHHHHHHhc
Confidence 88999999999999765
No 412
>PF03817 MadL: Malonate transporter MadL subunit; InterPro: IPR004690 The MSS family includes the monobasic malonate:Na+ symporter of Malonomonas rubra. It consists of two integral membrane proteins, MadL and MadM. The transporter is believed to catalyze the electroneutral reversible uptake of H+-malonate with one Na+, and both subunits have been shown to be essential for activity.
Probab=25.03 E-value=2.7e+02 Score=22.54 Aligned_cols=29 Identities=21% Similarity=0.383 Sum_probs=22.5
Q ss_pred HHHHHHHHHHHHHHHHHhhhhcccCCcce
Q psy15864 274 FATLLLGVAELGGALLCVVLIHYTGKRPL 302 (553)
Q Consensus 274 ~~~~~~~i~~~~g~~~~g~l~dr~Grr~~ 302 (553)
...++.+++..+.+++.-.+.+|+||+..
T Consensus 92 ~~Allagi~av~~~~~~ip~lsr~g~~~~ 120 (125)
T PF03817_consen 92 PVALLAGIGAVAVCFLLIPLLSRIGRKTP 120 (125)
T ss_pred cchHHHHHHHHHHHHHHHHHHHhcCCCCC
Confidence 45566777888888888889999997653
No 413
>PRK14205 camphor resistance protein CrcB; Provisional
Probab=24.70 E-value=3.2e+02 Score=22.22 Aligned_cols=17 Identities=6% Similarity=-0.174 Sum_probs=8.9
Q ss_pred hhhhccccceeecccccc
Q psy15864 347 HICIRLLPWMLIGEVFPN 364 (553)
Q Consensus 347 ~~~~~~~~~~~~~e~~p~ 364 (553)
..++.+.. ++..|.+.-
T Consensus 69 ~GgfTTFS-Tf~~e~~~l 85 (118)
T PRK14205 69 MGAFTTFS-TFKLESVQL 85 (118)
T ss_pred ccccccHH-HHHHHHHHH
Confidence 34444443 666676543
No 414
>KOG1277|consensus
Probab=24.52 E-value=2.7e+02 Score=28.53 Aligned_cols=17 Identities=12% Similarity=0.010 Sum_probs=7.1
Q ss_pred HHHHHHhhhhcccC-Ccc
Q psy15864 285 GGALLCVVLIHYTG-KRP 301 (553)
Q Consensus 285 ~g~~~~g~l~dr~G-rr~ 301 (553)
+...++|-+-.|+| ||+
T Consensus 342 i~GY~~gs~Y~r~gG~~W 359 (593)
T KOG1277|consen 342 INGYVSGSFYARLGGRRW 359 (593)
T ss_pred ccccccceeeehhccHHH
Confidence 33333333444554 444
No 415
>PTZ00362 hypothetical protein; Provisional
Probab=24.40 E-value=18 Score=36.38 Aligned_cols=7 Identities=43% Similarity=0.311 Sum_probs=3.3
Q ss_pred ccCCCCC
Q psy15864 493 MPETEGR 499 (553)
Q Consensus 493 ~peTkg~ 499 (553)
.||+.++
T Consensus 386 a~edi~~ 392 (479)
T PTZ00362 386 PIETIGQ 392 (479)
T ss_pred Chhhccc
Confidence 3455444
No 416
>KOG0388|consensus
Probab=24.28 E-value=1.1e+02 Score=33.07 Aligned_cols=12 Identities=8% Similarity=-0.034 Sum_probs=5.8
Q ss_pred HHHHHHHHHHHH
Q psy15864 145 SAAILNLLFPIL 156 (553)
Q Consensus 145 ~~f~i~~i~~li 156 (553)
.+|++.++.+.+
T Consensus 618 GPFLVVtpaStL 629 (1185)
T KOG0388|consen 618 GPFLVVTPASTL 629 (1185)
T ss_pred CceEEeehHHHH
Confidence 345555554444
No 417
>TIGR01478 STEVOR variant surface antigen, stevor family. This model represents the stevor branch of the rifin/stevor family (pfam02009) of predicted variant surface antigens as found in Plasmodium falciparum. This model is based on a set of stevor sequences kindly provided by Matt Berriman from the Sanger Center. This is a global model and assesses a penalty for incomplete sequence. Additional fragmentary sequences may be found with the fragment model and a cutoff of 8 bits.
Probab=24.14 E-value=57 Score=30.79 Aligned_cols=28 Identities=18% Similarity=0.241 Sum_probs=13.3
Q ss_pred ccchhhHHHHHHHHHHHHhhheEEcccC
Q psy15864 396 FHLWGTLYFYAAISVVGTLYMYFVMPET 423 (553)
Q Consensus 396 ~g~~~~~~~~~~~~~~~~~~~~~~~pet 423 (553)
+..+....++.++.+++++++++|+...
T Consensus 258 F~Pcgiaalvllil~vvliiLYiWlyrr 285 (295)
T TIGR01478 258 FLPYGIAALVLIILTVVLIILYIWLYRR 285 (295)
T ss_pred hcccHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3334444444444455555555555443
No 418
>PF00860 Xan_ur_permease: Permease family; InterPro: IPR006043 This entry represents a susbset of the wider APC (Amino acid-Polyamine-organoCation) superfamily of transporters []. Characterised proteins in this entry include: Xanthine permease PbuX, involved in cellualar xanthine transport [] Uric acid permeases which promotes uptake of uric acid into the cell in limiting-nitrogen conditions [] Uracil permease [] Sodium-dependent vitamin C transporter, a sodium/ascorbate cotransporter mediating electrogenic uptake of Vitamin C [] These proteins generally contain 12 transmembrane regions. Many members of this family are uncharacterised and may transport other substrates eg. RutG is likely to transport pyrimidines into the cell [].; GO: 0005215 transporter activity, 0006810 transport, 0055085 transmembrane transport, 0016020 membrane; PDB: 3QE7_A.
Probab=23.99 E-value=4.1e+02 Score=26.86 Aligned_cols=37 Identities=11% Similarity=-0.175 Sum_probs=17.9
Q ss_pred HHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHH
Q psy15864 274 FATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAAC 313 (553)
Q Consensus 274 ~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~ 313 (553)
.......+.+.+++++.++ +.|.|..+..+.....+.
T Consensus 37 ~li~at~l~sgi~Tllq~~---~~g~~lpl~~G~s~~~~~ 73 (389)
T PF00860_consen 37 ALISATFLVSGIATLLQGL---PAGHRLPLVPGPSFAFIF 73 (389)
T ss_dssp --HHHHHHHHHHHHHHHHH---HTTT-----EEE-GGGHH
T ss_pred HHHHHHHHHHHHHHHHHHh---cCCCceecccccchhhhh
Confidence 3344455666777777776 677777766665544444
No 419
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=23.65 E-value=4.7e+02 Score=22.45 Aligned_cols=39 Identities=13% Similarity=-0.205 Sum_probs=27.4
Q ss_pred cchhchhhhhHHHHHHHHHhhccccchHHHHHHHHHHHH
Q psy15864 117 GMLSATASMTTIFGTVSQLFLGSFLHWRSAAILNLLFPI 155 (553)
Q Consensus 117 g~~~~~~~~~~~lG~~l~~~l~~~lgWr~~f~i~~i~~l 155 (553)
-..+++......+..+++|.+...+|=||.+.+.++.-.
T Consensus 40 ~~slai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~ 78 (156)
T PF05978_consen 40 YYSLAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYA 78 (156)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHH
Confidence 334555666677788888888777788888877665444
No 420
>PRK14208 camphor resistance protein CrcB; Provisional
Probab=23.61 E-value=4.2e+02 Score=21.83 Aligned_cols=15 Identities=7% Similarity=-0.157 Sum_probs=7.6
Q ss_pred chhHHHHHHHHHHHH
Q psy15864 306 STGGSAACFIVVAVY 320 (553)
Q Consensus 306 ~~~~~~i~~~~~~~~ 320 (553)
.+++-++++++++++
T Consensus 37 Tl~vNi~GsfllG~~ 51 (126)
T PRK14208 37 TLLVNVSGSFLLAGI 51 (126)
T ss_pred HHHHHHHHHHHHHHH
Confidence 344445555555544
No 421
>KOG4112|consensus
Probab=23.42 E-value=2.4e+02 Score=21.71 Aligned_cols=33 Identities=21% Similarity=0.141 Sum_probs=17.0
Q ss_pred HHHHHHhHHHHhhccchhhHHHHHHHHHHHHhhhe
Q psy15864 383 FAVNKLYYPMLDTFHLWGTLYFYAAISVVGTLYMY 417 (553)
Q Consensus 383 ~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 417 (553)
.+.+++.|+..+.+++ ..+++++.+++.+++.+
T Consensus 36 aiVg~i~Gf~~Qqls~--tvy~vg~~~v~t~li~L 68 (101)
T KOG4112|consen 36 AIVGFIYGFAQQQLSV--TVYIVGAGFVFTLLITL 68 (101)
T ss_pred HHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHhcC
Confidence 3444566777776652 33444444444444443
No 422
>COG1079 Uncharacterized ABC-type transport system, permease component [General function prediction only]
Probab=23.26 E-value=7e+02 Score=24.24 Aligned_cols=96 Identities=16% Similarity=0.008 Sum_probs=47.7
Q ss_pred HHHHHHHHhhhhcccCCcceeecchhHHHHHHHHHHHHHHhhcccCCCCChhHHHHHHHHHHHHhhhhccccceeecccc
Q psy15864 283 ELGGALLCVVLIHYTGKRPLALISTGGSAACFIVVAVYAQFHLSYGWDSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVF 362 (553)
Q Consensus 283 ~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 362 (553)
-++-+-+++.+++|-|.-.+-+=+..++........... ..+.|.-++...+.+..++... .+.+...
T Consensus 20 PLllaaLG~l~sERsGVlNIglEG~M~~gAf~~~~~~~~-------t~spw~gl~~a~l~g~l~~ll~-----a~~ti~l 87 (304)
T COG1079 20 PLLLAALGGLFSERSGVLNIGLEGIMLLGAFSGALFAYG-------TGSPWLGLLAAALVGALFGLLH-----AFLTIKL 87 (304)
T ss_pred HHHHHHHHHHHHHHhceeeechhhHHHHHHHHHHHHHHc-------cccHHHHHHHHHHHHHHHHHHH-----HHHHHhh
Confidence 344455678889998876665544443333332222111 4455665555555555544443 3333333
Q ss_pred ccchhhhhhhHHHHHHHHHHHHHHHHhH
Q psy15864 363 PNNIRATASGASGSSSYIFAFAVNKLYY 390 (553)
Q Consensus 363 p~~~Rg~~~~~~~~~~~~~~~i~~~~~~ 390 (553)
-.++--++.++......+..+++-..++
T Consensus 88 ~~nqiisG~alnl~a~Glt~fl~~~~~~ 115 (304)
T COG1079 88 RANQIISGLALNLLASGLTAFLGQSIFG 115 (304)
T ss_pred ccccchhHHHHHHHHHHHHHHHHHHHhc
Confidence 3333345556655555555555544443
No 423
>PRK14206 camphor resistance protein CrcB; Provisional
Probab=23.09 E-value=4.3e+02 Score=21.77 Aligned_cols=17 Identities=0% Similarity=-0.167 Sum_probs=8.9
Q ss_pred Hhhhhccccceeeccccc
Q psy15864 346 THICIRLLPWMLIGEVFP 363 (553)
Q Consensus 346 ~~~~~~~~~~~~~~e~~p 363 (553)
+..++.+.. ++..|.+.
T Consensus 74 f~GgfTTFS-Tf~~e~~~ 90 (127)
T PRK14206 74 VCGGFTTFS-SFSLQTLN 90 (127)
T ss_pred HccccccHH-HHHHHHHH
Confidence 334444443 66667654
No 424
>PRK14220 camphor resistance protein CrcB; Provisional
Probab=23.07 E-value=3e+02 Score=22.47 Aligned_cols=14 Identities=0% Similarity=-0.157 Sum_probs=7.0
Q ss_pred hhHHHHHHHHHHHH
Q psy15864 307 TGGSAACFIVVAVY 320 (553)
Q Consensus 307 ~~~~~i~~~~~~~~ 320 (553)
+++-++++++++++
T Consensus 39 l~VNi~GsfllG~l 52 (120)
T PRK14220 39 LLINLTGAFILGLI 52 (120)
T ss_pred HHHHHHHHHHHHHH
Confidence 34445555555544
No 425
>PF15061 DUF4538: Domain of unknown function (DUF4538)
Probab=22.97 E-value=70 Score=22.12 Aligned_cols=20 Identities=15% Similarity=0.340 Sum_probs=16.6
Q ss_pred chHHHHHHHHHHHHHHHHHh
Q psy15864 142 HWRSAAILNLLFPILALCAL 161 (553)
Q Consensus 142 gWr~~f~i~~i~~li~~i~~ 161 (553)
|||...++.++++++.+.+.
T Consensus 4 g~r~~~~~ggfVg~iG~a~Y 23 (58)
T PF15061_consen 4 GWRYALFVGGFVGLIGAALY 23 (58)
T ss_pred cccchhhHHHHHHHHHHHHh
Confidence 79999999999988876554
No 426
>CHL00161 secY preprotein translocase subunit SecY; Validated
Probab=22.92 E-value=7.4e+02 Score=25.38 Aligned_cols=25 Identities=20% Similarity=0.307 Sum_probs=15.7
Q ss_pred eEeeeEeeccCCCCCCHHHHHHHhhcC
Q psy15864 485 GTLYMYFVMPETEGRTLRDIEEHFADK 511 (553)
Q Consensus 485 ~~~~~~f~~peTkg~tleei~~~f~~~ 511 (553)
+..|.+|+. +.- -+-+||.+.|++.
T Consensus 306 ii~Fs~f~~-~i~-~~p~~iA~~Lkk~ 330 (417)
T CHL00161 306 ILFFSYFYS-TIV-LNPKDISENLQKM 330 (417)
T ss_pred HHHHHHHHH-HHh-cCHHHHHHHHHHC
Confidence 334555554 333 7778898888655
No 427
>KOG2223|consensus
Probab=22.84 E-value=2.1e+02 Score=28.99 Aligned_cols=11 Identities=27% Similarity=0.220 Sum_probs=6.2
Q ss_pred hhhhhhhhccC
Q psy15864 102 LVLTYVAEITQ 112 (553)
Q Consensus 102 ~~~~~i~e~~p 112 (553)
.+.+++.|+.|
T Consensus 273 ~v~vW~~eILp 283 (586)
T KOG2223|consen 273 AVNVWENEILP 283 (586)
T ss_pred HHHHHHHHhcc
Confidence 34456666655
No 428
>TIGR00918 2A060602 The Eukaryotic (Putative) Sterol Transporter (EST) Family.
Probab=22.76 E-value=5.7e+02 Score=30.13 Aligned_cols=21 Identities=0% Similarity=0.116 Sum_probs=8.8
Q ss_pred HHHHHHHHHhhhhccccceeec
Q psy15864 338 FLVLAAFLTHICIRLLPWMLIG 359 (553)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~ 359 (553)
+.+..|++...+.. +...+..
T Consensus 1025 LimsIGisVefsaH-I~~~F~~ 1045 (1145)
T TIGR00918 1025 LIASVGIGVEFTVH-IALGFLT 1045 (1145)
T ss_pred HHHHHhhhhhhhHH-HHHHHHh
Confidence 33344555444432 2335543
No 429
>PF06123 CreD: Inner membrane protein CreD; InterPro: IPR010364 This family consists of several bacterial CreD or Cet inner membrane proteins. Dominant mutations of the cet gene of Escherichia coli result in tolerance to colicin E2 and increased amounts of an inner membrane protein with a Mr of 42,000. The cet gene is shown to be in the same operon as the phoM gene, which is required in a phoR background for expression of the structural gene for alkaline phosphatase, phoA. Although the Cet protein is not required for phoA expression, it has been suggested that the Cet protein has an enhancing effect on the transcription of phoA [].
Probab=22.59 E-value=8.5e+02 Score=25.07 Aligned_cols=10 Identities=10% Similarity=0.361 Sum_probs=4.2
Q ss_pred cccccccccc
Q psy15864 88 EKGTFLYKMA 97 (553)
Q Consensus 88 ~~gr~~~G~g 97 (553)
++.++.+|++
T Consensus 141 ~~a~l~~gis 150 (430)
T PF06123_consen 141 DKAYLVLGIS 150 (430)
T ss_pred CCEEEEEEcc
Confidence 3344444443
No 430
>PRK14197 camphor resistance protein CrcB; Provisional
Probab=22.49 E-value=4.1e+02 Score=21.82 Aligned_cols=15 Identities=7% Similarity=0.069 Sum_probs=7.7
Q ss_pred hhhccccceeeccccc
Q psy15864 348 ICIRLLPWMLIGEVFP 363 (553)
Q Consensus 348 ~~~~~~~~~~~~e~~p 363 (553)
.++.+.. ++..|...
T Consensus 74 GgfTTFS-Tf~~E~~~ 88 (124)
T PRK14197 74 GALTTFS-TFSNETLL 88 (124)
T ss_pred ccchhHH-HHHHHHHH
Confidence 3444443 66666654
No 431
>PF02537 CRCB: CrcB-like protein; InterPro: IPR003691 Three genes, crcA, cspE and crcB when present in high copy confer camphor resistance on a cell and suppress mutations in the chromosomal partition gene mukB in Escherichia coli. The cspE gene has been previously identified as a cold shock-like protein with homologues in all organisms tested []. Camphor and mukB mutations may interfere with chromosome condensation and high copy crcA, cspE and crcB have been implicated as promoting or protecting chromosome folding [].; GO: 0016020 membrane
Probab=22.35 E-value=4.1e+02 Score=21.27 Aligned_cols=42 Identities=17% Similarity=0.058 Sum_probs=18.3
Q ss_pred HHHHHHHHHHHhhhhcccCCcc--eeecchhHHHHHHHHHHHHH
Q psy15864 280 GVAELGGALLCVVLIHYTGKRP--LALISTGGSAACFIVVAVYA 321 (553)
Q Consensus 280 ~i~~~~g~~~~g~l~dr~Grr~--~l~~~~~~~~i~~~~~~~~~ 321 (553)
.+++.+|++.=-.+.+...++. .....+++-++++++++++.
T Consensus 5 ~lgg~~Ga~~R~~l~~~~~~~~~~~p~gt~~vN~~g~fllG~~~ 48 (117)
T PF02537_consen 5 ALGGALGALLRYGLSKLLNRRWGWFPWGTLLVNVLGCFLLGLLA 48 (117)
T ss_pred HHHHHHHHHHHHHHHHHhccccCCCchHHHHHHHHHHHHHHHHH
Confidence 4455555554434444333321 12333444455555555443
No 432
>COG0239 CrcB Integral membrane protein possibly involved in chromosome condensation [Cell division and chromosome partitioning]
Probab=22.18 E-value=4.5e+02 Score=21.69 Aligned_cols=44 Identities=18% Similarity=0.163 Sum_probs=19.8
Q ss_pred HHHHHHHHHHHHHhhhhcccCCcc---eeecchhHHHHHHHHHHHHH
Q psy15864 278 LLGVAELGGALLCVVLIHYTGKRP---LALISTGGSAACFIVVAVYA 321 (553)
Q Consensus 278 ~~~i~~~~g~~~~g~l~dr~Grr~---~l~~~~~~~~i~~~~~~~~~ 321 (553)
..++++.+|+++=-+++..+.++. .-...++.-.+++++++++.
T Consensus 7 ~v~~GGa~GA~lR~~l~~~~~~~~~~~fP~GTl~vNv~GsFllG~~~ 53 (126)
T COG0239 7 LVAIGGALGALLRYLLSLLVNRRLGPGFPLGTLLVNVVGSFLLGFLT 53 (126)
T ss_pred HHHHhhHHHHHHHHHHHHHhhccccCCCcHHHHHHHHHHHHHHHHHH
Confidence 344555666555444444444321 12223344445555555443
No 433
>COG0733 Na+-dependent transporters of the SNF family [General function prediction only]
Probab=22.16 E-value=5.6e+02 Score=26.33 Aligned_cols=12 Identities=25% Similarity=0.462 Sum_probs=5.6
Q ss_pred hhHHHHhhHHHH
Q psy15864 251 GMTTLQTYAVGI 262 (553)
Q Consensus 251 ~~~~~~~~~~~~ 262 (553)
+...+..|..++
T Consensus 230 G~g~mitYsSYL 241 (439)
T COG0733 230 GFGIMITYSSYL 241 (439)
T ss_pred HHHHHHHHHhhc
Confidence 344445554444
No 434
>PRK14224 camphor resistance protein CrcB; Provisional
Probab=22.13 E-value=4.5e+02 Score=21.67 Aligned_cols=15 Identities=7% Similarity=0.076 Sum_probs=7.6
Q ss_pred hhhccccceeeccccc
Q psy15864 348 ICIRLLPWMLIGEVFP 363 (553)
Q Consensus 348 ~~~~~~~~~~~~e~~p 363 (553)
.++.+.. ++..|.+.
T Consensus 76 GgfTTFS-Tf~~E~~~ 90 (126)
T PRK14224 76 GAFTTFS-TFAVQSFS 90 (126)
T ss_pred chhccHH-HHHHHHHH
Confidence 3444443 56666654
No 435
>PF01405 PsbT: Photosystem II reaction centre T protein; InterPro: IPR001743 Oxygenic photosynthesis uses two multi-subunit photosystems (I and II) located in the cell membranes of cyanobacteria and in the thylakoid membranes of chloroplasts in plants and algae. Photosystem II (PSII) has a P680 reaction centre containing chlorophyll 'a' that uses light energy to carry out the oxidation (splitting) of water molecules, and to produce ATP via a proton pump. Photosystem I (PSI) has a P700 reaction centre containing chlorophyll that takes the electron and associated hydrogen donated from PSII to reduce NADP+ to NADPH. Both ATP and NADPH are subsequently used in the light-independent reactions to convert carbon dioxide to glucose using the hydrogen atom extracted from water by PSII, releasing oxygen as a by-product. PSII is a multisubunit protein-pigment complex containing polypeptides both intrinsic and extrinsic to the photosynthetic membrane [, ]. Within the core of the complex, the chlorophyll and beta-carotene pigments are mainly bound to the antenna proteins CP43 (PsbC) and CP47 (PsbB), which pass the excitation energy on to the reaction centre proteins D1 (Qb, PsbA) and D2 (Qa, PsbD) that bind all the redox-active cofactors involved in the energy conversion process. The PSII oxygen-evolving complex (OEC) oxidises water to provide protons for use by PSI, and consists of OEE1 (PsbO), OEE2 (PsbP) and OEE3 (PsbQ). The remaining subunits in PSII are of low molecular weight (less than 10 kDa), and are involved in PSII assembly, stabilisation, dimerisation, and photo-protection []. This family represents the low molecular weight transmembrane protein PsbT found in PSII, which is thought to be associated with the D1 (PsbA) - D2 (PsbD) heterodimer. PsbT may be involved in the formation and/or stabilisation of dimeric PSII complexes, because in the absence of this protein dimeric PSII complexes were found to be less abundant. Furthermore, although PsbT does not confer photo-protection, it is required for the efficient recovery of photo-damaged PSII [].; GO: 0015979 photosynthesis, 0009523 photosystem II, 0009539 photosystem II reaction center, 0016020 membrane; PDB: 3BZ1_T 1S5L_t 2AXT_t 3KZI_T 3PRQ_T 3BZ2_T 3PRR_T 4FBY_g 3A0H_t 3A0B_T ....
Probab=22.06 E-value=1.4e+02 Score=17.43 Aligned_cols=10 Identities=30% Similarity=0.504 Sum_probs=3.1
Q ss_pred HhccccCCce
Q psy15864 160 ALYFIPESPH 169 (553)
Q Consensus 160 ~~~~lpEsp~ 169 (553)
+..++.|+||
T Consensus 19 fAI~FRePPr 28 (29)
T PF01405_consen 19 FAIFFREPPR 28 (29)
T ss_dssp HHHHSS----
T ss_pred hhhhccCCCC
Confidence 3445677775
No 436
>PRK11469 hypothetical protein; Provisional
Probab=21.92 E-value=5.7e+02 Score=22.77 Aligned_cols=37 Identities=11% Similarity=-0.058 Sum_probs=20.9
Q ss_pred HHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHHH
Q psy15864 280 GVAELGGALLCVVLIHYTGKRPLALISTGGSAACFIV 316 (553)
Q Consensus 280 ~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~ 316 (553)
.+...+|..++.++..++|+|.-++.+.++..++.-+
T Consensus 145 ~~~~~~G~~lG~~~g~~~g~~a~~lgG~iLI~iGi~i 181 (188)
T PRK11469 145 LIMSTLGMMVGRFIGSIIGKKAEILGGLVLIGIGVQI 181 (188)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444455555555666777776665555555555443
No 437
>TIGR00986 3a0801s05tom22 mitochondrial import receptor subunit Tom22. translocase (Tom) import receptor, five proteins of the Tom channel complex, five proteins of the inner membrane translocase (Tim) and three "motor" proteins. This family is specific for the Tom22 proteins.
Probab=21.79 E-value=1.5e+02 Score=24.96 Aligned_cols=22 Identities=9% Similarity=0.199 Sum_probs=15.9
Q ss_pred eccccccchhhhhhhHHHHHHH
Q psy15864 358 IGEVFPNNIRATASGASGSSSY 379 (553)
Q Consensus 358 ~~e~~p~~~Rg~~~~~~~~~~~ 379 (553)
+.|++|+..|....+.......
T Consensus 58 LkDm~Pp~~R~~i~~~~s~t~s 79 (145)
T TIGR00986 58 LKDIVPPTTRGWIYHKYSTTTN 79 (145)
T ss_pred HHhhCCHHHHHHHHHHHHHHHH
Confidence 4699999999887665554433
No 438
>PRK14207 camphor resistance protein CrcB; Provisional
Probab=21.70 E-value=4.5e+02 Score=21.52 Aligned_cols=16 Identities=13% Similarity=0.054 Sum_probs=8.4
Q ss_pred hhhhccccceeeccccc
Q psy15864 347 HICIRLLPWMLIGEVFP 363 (553)
Q Consensus 347 ~~~~~~~~~~~~~e~~p 363 (553)
..++.+.. ++..|.+.
T Consensus 74 ~GgfTTFS-Tf~~E~~~ 89 (123)
T PRK14207 74 CGGLSTFS-TFSYETFS 89 (123)
T ss_pred hcccccHH-HHHHHHHH
Confidence 34444443 66667654
No 439
>KOG3312|consensus
Probab=21.69 E-value=1.2e+02 Score=25.49 Aligned_cols=46 Identities=28% Similarity=0.357 Sum_probs=0.0
Q ss_pred hhhHhhhhHhhhhhhHHHHHHHHHHHHHHHHhhhhhHhhhhcccCC
Q psy15864 19 DWKKAKKKEKKKKEKKAKKKEKKKEKKKKEKKKKKKKKKKKKKNNN 64 (553)
Q Consensus 19 ~~~k~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 64 (553)
+..|-.-+|+.||-++.|++.-..-++.+++|-++.+++-+..+.+
T Consensus 37 k~LKa~vdK~sKKLE~~K~~~~~s~~k~~kkKieR~Ee~LK~~nRD 82 (186)
T KOG3312|consen 37 KRLKAEVDKQSKKLEKKKEENGDSNDKSKKKKIERVEEKLKNNNRD 82 (186)
T ss_pred HHHHHHHHHHHHHHHHHhhhcccchhhHHHHHHHHHHHHHhccccc
No 440
>PRK11715 inner membrane protein; Provisional
Probab=21.64 E-value=8.8e+02 Score=25.02 Aligned_cols=111 Identities=16% Similarity=0.087 Sum_probs=0.0
Q ss_pred cchhHHHHHHHHHHHHh--------------hhhhHHHHhhHHHHHHhhCCCCChHHHHHHHHHHHHHHHHHHhhhhccc
Q psy15864 232 TFLLPYAIVTSLFFIGQ--------------FGGMTTLQTYAVGIFESIHAPLDPYFATLLLGVAELGGALLCVVLIHYT 297 (553)
Q Consensus 232 ~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~g~~~~g~l~dr~ 297 (553)
++-..++.+.++.++.. ..|.....+|+-.+--.-+.+....+..+..++..+++..++..+-
T Consensus 305 KYgiLFI~LTF~~fFlfE~~~~~~iHpiQYlLVGlAl~lFYLLLLSlSEHigF~~AYliAa~a~v~li~~Y~~~vl~--- 381 (436)
T PRK11715 305 KYAILFIALTFAAFFLFELLKKLRIHPVQYLLVGLALVLFYLLLLSLSEHIGFTLAYLIAALACVLLIGFYLSAVLR--- 381 (436)
T ss_pred hHHHHHHHHHHHHHHHHHHhcCceecHHHHHHHHHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHHHHh---
Q ss_pred CCcceeecchhHHHHHHHHHHHHHHhhcccCCCCChhHHHHHHHHHHHHhhhhcc
Q psy15864 298 GKRPLALISTGGSAACFIVVAVYAQFHLSYGWDSPLVPTVFLVLAAFLTHICIRL 352 (553)
Q Consensus 298 Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (553)
++|+.+.++..+.++-.++..++. ......++-...++......++.+
T Consensus 382 ~~k~g~~~~~~L~~LYg~Ly~lLq-------~EDyALL~GSllLF~~La~vM~~T 429 (436)
T PRK11715 382 SWKRGLLFAAALAALYGVLYGLLQ-------SEDYALLLGSLLLFAVLALVMFLT 429 (436)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHH-------HhHHHHHHHHHHHHHHHHHHHhee
No 441
>PF06645 SPC12: Microsomal signal peptidase 12 kDa subunit (SPC12); InterPro: IPR009542 This family consists of several microsomal signal peptidase 12 kDa subunit proteins. Translocation of polypeptide chains across the endoplasmic reticulum (ER) membrane is triggered by signal sequences. Subsequently, signal recognition particle interacts with its membrane receptor and the ribosome-bound nascent chain is targeted to the ER where it is transferred into a protein-conducting channel. At some point, a second signal sequence recognition event takes place in the membrane and translocation of the nascent chain through the membrane occurs. The signal sequence of most secretory and membrane proteins is cleaved off at this stage. Cleavage occurs by the signal peptidase complex (SPC) as soon as the lumenal domain of the translocating polypeptide is large enough to expose its cleavage site to the enzyme. The signal peptidase complex is possibly also involved in proteolytic events in the ER membrane other than the processing of the signal sequence, for example the further digestion of the cleaved signal peptide or the degradation of membrane proteins. Mammalian signal peptidase is as a complex of five different polypeptide chains. This family represents the 12 kDa subunit (SPC12).; GO: 0008233 peptidase activity, 0006465 signal peptide processing, 0005787 signal peptidase complex, 0016021 integral to membrane
Probab=21.63 E-value=1.6e+02 Score=21.85 Aligned_cols=41 Identities=10% Similarity=0.096 Sum_probs=0.0
Q ss_pred hhhhhHHHHHHHHHhhcccc-chHHHHHHHHHHHHHHHHHhc
Q psy15864 122 TASMTTIFGTVSQLFLGSFL-HWRSAAILNLLFPILALCALY 162 (553)
Q Consensus 122 ~~~~~~~lG~~l~~~l~~~l-gWr~~f~i~~i~~li~~i~~~ 162 (553)
++.....++.+++.++|... +-+..+++.++..++++++..
T Consensus 12 l~~~il~~~~iisfi~Gy~~q~~~~~~~~~~~g~~~~~lv~v 53 (76)
T PF06645_consen 12 LMQYILIISAIISFIVGYITQSFSYTFYIYGAGVVLTLLVVV 53 (76)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhee
No 442
>PTZ00399 cysteinyl-tRNA-synthetase; Provisional
Probab=21.60 E-value=1.2e+02 Score=33.17 Aligned_cols=42 Identities=33% Similarity=0.416 Sum_probs=0.0
Q ss_pred CcchhhHhhhhHhhhhhhHHHHHHHHHHHHHHHHhhhhhHhh
Q psy15864 16 TPLDWKKAKKKEKKKKEKKAKKKEKKKEKKKKEKKKKKKKKK 57 (553)
Q Consensus 16 ~~~~~~k~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 57 (553)
++.++.+.+.+++.++++|..+++++++.+++++.++..+.+
T Consensus 549 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 590 (651)
T PTZ00399 549 DKEELQREKEEKEALKEQKRLRKLKKQEEKKKKELEKLEKAK 590 (651)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
No 443
>PF08997 UCR_6-4kD: Ubiquinol-cytochrome C reductase complex, 6.4kD protein; InterPro: IPR015089 The ubiquinol-cytochrome C reductase complex (cytochrome bc1 complex) is an essential component of the mitochondrial cellular respiratory chain. This family represents the 6.4 kDa protein, which may be closely linked to the iron-sulphur protein in the complex and function as an iron-sulphur protein-binding factor []. ; GO: 0008121 ubiquinol-cytochrome-c reductase activity, 0009055 electron carrier activity; PDB: 1NTM_K 1SQV_K 1SQB_K 1NU1_K 1SQQ_K 1BE3_K 1BGY_W 2YBB_k 2FYU_K 1L0N_K ....
Probab=21.50 E-value=69 Score=22.03 Aligned_cols=42 Identities=14% Similarity=0.283 Sum_probs=0.0
Q ss_pred hhhhccCcccccchhchhhhhHHHHHHHHHhhccccchHHHH
Q psy15864 106 YVAEITQPHLRGMLSATASMTTIFGTVSQLFLGSFLHWRSAA 147 (553)
Q Consensus 106 ~i~e~~p~~~Rg~~~~~~~~~~~lG~~l~~~l~~~lgWr~~f 147 (553)
+++.+..++....+..+.......|...+-.+..+..||.++
T Consensus 1 m~~r~~G~k~~~lak~w~ps~~~~G~~~~l~lvy~TDWklIl 42 (56)
T PF08997_consen 1 MLSRLIGPKYIELAKNWIPSAAAWGAAGGLALVYFTDWKLIL 42 (56)
T ss_dssp -GGGG-SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHH
T ss_pred CchhhhcHHHHHHHHHhchhHHHHhhhhhhheeeecchHhhh
No 444
>PF04024 PspC: PspC domain; InterPro: IPR007168 This domain is found in Phage shock protein C (PspC) that is thought to be a transcriptional regulator. The presumed domain is 60 amino acid residues in length.
Probab=21.40 E-value=1.3e+02 Score=21.20 Aligned_cols=26 Identities=23% Similarity=0.432 Sum_probs=0.0
Q ss_pred hHHHHHHHHHHH----HHHHHHhccccCCc
Q psy15864 143 WRSAAILNLLFP----ILALCALYFIPESP 168 (553)
Q Consensus 143 Wr~~f~i~~i~~----li~~i~~~~lpEsp 168 (553)
+|.+|.+..+++ ++-+++++++|+.|
T Consensus 31 vRl~~v~l~~~~~~~~l~Y~~~w~~lP~~~ 60 (61)
T PF04024_consen 31 VRLIFVVLTFFTGGGILLYLILWLLLPKEP 60 (61)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHcCCCC
No 445
>PRK14201 camphor resistance protein CrcB; Provisional
Probab=21.23 E-value=4.6e+02 Score=21.39 Aligned_cols=115 Identities=6% Similarity=-0.158 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHHHHHHHHHhhcccCCCCChhHHHHHHHHHHHHhhhhccccc
Q psy15864 276 TLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAACFIVVAVYAQFHLSYGWDSPLVPTVFLVLAAFLTHICIRLLPW 355 (553)
Q Consensus 276 ~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (553)
.+...+++.+|++.=-.+.....+...-+..+++-++++++++++.... .......--.+.+.+.++..++.+..
T Consensus 3 ~~~V~~Gg~~Ga~~R~~l~~~~~~~~fP~gTl~vN~~G~fllG~~~~~~----~~~~~~~~~~~~~l~tGf~GgfTTFS- 77 (121)
T PRK14201 3 YVYIFIGGALGALLRYLLSFLNTDGGFPIGTLIANLTGAFLMGLLTALT----IAFFSNHPTLKKAITTGFLGALTTFS- 77 (121)
T ss_pred hHHHHHHHHHHHHHHHHHHhHhccCCchHHHHHHHHHHHHHHHHHHHHH----HHccCCCHHHHHHHHhhhccCcccch-
Q ss_pred eeeccccccchhhh-hhhHHHHHHHHHHHHHHHHhHHHHhh
Q psy15864 356 MLIGEVFPNNIRAT-ASGASGSSSYIFAFAVNKLYYPMLDT 395 (553)
Q Consensus 356 ~~~~e~~p~~~Rg~-~~~~~~~~~~~~~~i~~~~~~~~~~~ 395 (553)
++..|.+.--.++. ..++.+....+...+.....|..+..
T Consensus 78 Tf~~E~~~l~~~~~~~~a~~y~~~s~~~gl~~~~~G~~l~~ 118 (121)
T PRK14201 78 TFQFELIHMFDHQQFITLLLYAVTSYIFGILLCYVGIKLGG 118 (121)
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHh
No 446
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=21.15 E-value=48 Score=40.05 Aligned_cols=29 Identities=66% Similarity=0.887 Sum_probs=0.0
Q ss_pred hhhcccCCCCCCCCCCCCCCCCCCCCCCC
Q psy15864 57 KKKKKNNNNNNNNNNNNNNNNNNNNNNNN 85 (553)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (553)
+.++.++|+++++.++||||||++..+++
T Consensus 672 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 700 (1466)
T PTZ00265 672 KDNKENNNKNNKDDNNNNNNNNNNKINNA 700 (1466)
T ss_pred ccccccccccccccccccccccccccccC
No 447
>PRK14216 camphor resistance protein CrcB; Provisional
Probab=21.10 E-value=4.9e+02 Score=21.66 Aligned_cols=123 Identities=9% Similarity=-0.080 Sum_probs=0.0
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHhhhhcccCC--cceeecchhHHHHHHHHHHHHHHhhcccCCCCChhHHHHHHHHHHH
Q psy15864 268 APLDPYFATLLLGVAELGGALLCVVLIHYTGK--RPLALISTGGSAACFIVVAVYAQFHLSYGWDSPLVPTVFLVLAAFL 345 (553)
Q Consensus 268 ~~~~~~~~~~~~~i~~~~g~~~~g~l~dr~Gr--r~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (553)
+........+..++++.+|++.=-.++..+.+ ...-+..+++-++++++++++.... .......--.+.+.+.+
T Consensus 1 ~~~~~~~~~l~V~iGG~lGa~~Ry~l~~~~~~~~~~fP~gTl~vNv~GsfllG~~~~~~----~~~~~~~~~~~~~l~tG 76 (132)
T PRK14216 1 MPRHDYRELAAVFAGGALGTLARAALSELAAPDPARWPWPTFTVNVVGAFLLGYFTTRL----LERLPLSSYRRPLLGTG 76 (132)
T ss_pred CccccHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcHHHHHHHHHHHHHHHHHHHHH----HhcCCCCHHHHHHHHhh
Q ss_pred Hhhhhccccceeecccccc-chhhhhhhHHHHHHHHHHHHHHHHhHHHHhh
Q psy15864 346 THICIRLLPWMLIGEVFPN-NIRATASGASGSSSYIFAFAVNKLYYPMLDT 395 (553)
Q Consensus 346 ~~~~~~~~~~~~~~e~~p~-~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~~ 395 (553)
+..++.+.. ++..|.+.- +.+....++.+....+...+.....|..+..
T Consensus 77 f~GgfTTFS-Tf~~E~~~l~~~~~~~~a~~y~~~s~~~gl~a~~lG~~l~~ 126 (132)
T PRK14216 77 LCGGLTTFS-TMQVETIRMIEHGHWGLAAGYTAASIAAGLLAVHLATVLVR 126 (132)
T ss_pred hhccccchH-HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
No 448
>PTZ00399 cysteinyl-tRNA-synthetase; Provisional
Probab=21.07 E-value=98 Score=33.75 Aligned_cols=50 Identities=36% Similarity=0.512 Sum_probs=0.0
Q ss_pred cchhhHhhhhH-hhhhhhHHHHHHHHHHHHHHHHhhhhhHhhhhcccCCCC
Q psy15864 17 PLDWKKAKKKE-KKKKEKKAKKKEKKKEKKKKEKKKKKKKKKKKKKNNNNN 66 (553)
Q Consensus 17 ~~~~~k~~k~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 66 (553)
+..|++..+++ .+..++|...+++++.+++++++++++++.++.++..-+
T Consensus 542 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 592 (651)
T PTZ00399 542 PSVWKLDDKEELQREKEEKEALKEQKRLRKLKKQEEKKKKELEKLEKAKIP 592 (651)
T ss_pred ceEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
No 449
>COG2233 UraA Xanthine/uracil permeases [Nucleotide transport and metabolism]
Probab=20.91 E-value=8.8e+02 Score=25.11 Aligned_cols=163 Identities=10% Similarity=-0.068 Sum_probs=0.0
Q ss_pred HHHHHHHhhhhhHHHHhhHHHHH-HhhCCCCChH-HHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHHHHH
Q psy15864 241 TSLFFIGQFGGMTTLQTYAVGIF-ESIHAPLDPY-FATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAACFIVVA 318 (553)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~-~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~ 318 (553)
..+..+++....+.-....|.+. ...+++.+.. ...+...+.+-+++++.-....+.|-|-....+.....++-++..
T Consensus 18 ~~~lglQH~lamfg~~V~VPlivg~a~~l~~~~~~~Lis~~l~~~GiaTllq~~~~~~~g~~lP~~lG~sFafi~p~i~~ 97 (451)
T COG2233 18 LLLLGLQHLLAMFGATVLVPLLVGLALGLSAEDTAYLISADLLASGIGTLLQLLGTGPGGSGLPSYLGSSFAFVAPMIAI 97 (451)
T ss_pred HHHHHHHHHHHHHhcchHhhHHhccCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhccCcccCCCeeEechHHHHHHHHHH
Q ss_pred HHHHhhcccCCCCC--hhHHHHHHHHHHHHhhhhccccce-eeccccccchhhhhhhHHHHHHHHHHHHHHHHhHHHHhh
Q psy15864 319 VYAQFHLSYGWDSP--LVPTVFLVLAAFLTHICIRLLPWM-LIGEVFPNNIRATASGASGSSSYIFAFAVNKLYYPMLDT 395 (553)
Q Consensus 319 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~-~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~~ 395 (553)
. .... ...+.+..+.+........++. . ++..++||-.-|. .+..+|-.+.+.....+...
T Consensus 98 ~---------~~~g~~~~~~~G~ii~ag~~~~li~~~~-~~~l~rlfPPvVtG~------Vi~~IGlsL~~vai~~~~G~ 161 (451)
T COG2233 98 G---------GTTGDGIAALLGGIIAAGLVYFLISPIV-KIRLARLFPPVVTGP------VVLVIGLSLAPVAINMAGGG 161 (451)
T ss_pred H---------hccCCchHHHHHHHHHHHHHHHHHHHHH-HHHHHHhCCCceEEe------EeeeehhhhHHHHHHHhhCC
Q ss_pred c--------cchhhHHHHHHHHHHHHhhheEE
Q psy15864 396 F--------HLWGTLYFYAAISVVGTLYMYFV 419 (553)
Q Consensus 396 ~--------g~~~~~~~~~~~~~~~~~~~~~~ 419 (553)
. +....+.+..+..++..++..+.
T Consensus 162 ~~~~~~~~~~~~~~l~la~~tl~~il~~~~f~ 193 (451)
T COG2233 162 PGAAGNPDFGSLENLGLALVTLLIILLINRFG 193 (451)
T ss_pred CCCCCCcccCchhHHHHHHHHHHHHHHHHHHh
No 450
>PF10225 DUF2215: Uncharacterized conserved protein (DUF2215); InterPro: IPR024233 This entry represents a domain that is found in a number of different proteins, including a family of transmembrane proteins.
Probab=20.65 E-value=7.1e+02 Score=23.37 Aligned_cols=148 Identities=9% Similarity=-0.020 Sum_probs=0.0
Q ss_pred HHhhhhhHHHHhhHHHHHHhhCCCCChHHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHHHHHHHHHhhc
Q psy15864 246 IGQFGGMTTLQTYAVGIFESIHAPLDPYFATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAACFIVVAVYAQFHL 325 (553)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~ 325 (553)
+..+..-..+....+.+-+ .......+.+.+|.+...++.-++.-|+=.|+......+..+.+.....+-..
T Consensus 14 ~~~~v~Gi~Lf~~A~~LS~-----s~~FyY~sg~~lGv~~s~li~~~~~~k~lPrk~~~~~~l~gg~~~~~y~l~~~--- 85 (249)
T PF10225_consen 14 VAQFVLGIVLFFLAPSLSR-----SVLFYYSSGISLGVLASLLILLFQLSKLLPRKSMFYAVLYGGWSFGLYFLQQL--- 85 (249)
T ss_pred HHHHHHHHHHHHHhHHhcc-----ChhHHHhhhHHHHHHHHHHHHHHHHHHHccCcchhHHHHhhhhHHHHHHHHHH---
Q ss_pred ccCCCCChhHHHHHHHHHHHHhhhhccccceeec-cccccchhhhhhhHHHHHHHHHHHHHHHHhHHHHhhccchhhHHH
Q psy15864 326 SYGWDSPLVPTVFLVLAAFLTHICIRLLPWMLIG-EVFPNNIRATASGASGSSSYIFAFAVNKLYYPMLDTFHLWGTLYF 404 (553)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~~~g~~~~~~~ 404 (553)
..+...++.-...+.+++-...+.+.+..+. .--+.+.|.. +.+.+...+++..+...-...........+
T Consensus 86 ---~~nl~~il~~~~~~v~~yv~~~G~vsf~vcy~~gp~~~~rs~-----~~v~W~Lqligl~lI~~ss~~~~~a~~~i~ 157 (249)
T PF10225_consen 86 ---WENLQSILEEYRIYVLGYVLVVGLVSFAVCYRYGPPVDPRSR-----NFVKWALQLIGLVLIYFSSQDPEFAFAAII 157 (249)
T ss_pred ---HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCccHhHH-----HHHHHHHHHHHHHHHHHHcCcHHHHHHHHH
Q ss_pred HHHHH
Q psy15864 405 YAAIS 409 (553)
Q Consensus 405 ~~~~~ 409 (553)
.+.+.
T Consensus 158 ~~l~~ 162 (249)
T PF10225_consen 158 LLLLW 162 (249)
T ss_pred HHHHH
No 451
>PF13038 DUF3899: Domain of unknown function (DUF3899)
Probab=20.55 E-value=62 Score=24.86 Aligned_cols=37 Identities=24% Similarity=0.370 Sum_probs=0.0
Q ss_pred hhHhhhhHhhhhhhHHHHHHHHHHHHHHHHhhhhhHh
Q psy15864 20 WKKAKKKEKKKKEKKAKKKEKKKEKKKKEKKKKKKKK 56 (553)
Q Consensus 20 ~~k~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 56 (553)
++|.++..+++++++..++++...+++.++++.....
T Consensus 34 frr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (92)
T PF13038_consen 34 FRRLFRQIKKKKKKSSIEDDEFSNDKKLKKEKYRVSR 70 (92)
T ss_pred HHHHHHHhcccchhhhccchhccchHHHHHhhhHhHH
No 452
>PRK02237 hypothetical protein; Provisional
Probab=20.39 E-value=2.5e+02 Score=22.39 Aligned_cols=73 Identities=12% Similarity=-0.090 Sum_probs=0.0
Q ss_pred HHHHHHHHHhhhhhHHHHhhHHHHHHhhCCCCChHHHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHHHHH
Q psy15864 239 IVTSLFFIGQFGGMTTLQTYAVGIFESIHAPLDPYFATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAACFIVVA 318 (553)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~ 318 (553)
....+........+..+.+..|. .+..-....++-..++.+++.++..|....-+.=+++..++.++..++.
T Consensus 33 ~~~~~pg~~~L~lfg~llTl~p~--------~~~GRvYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~ 104 (109)
T PRK02237 33 AWWLLPGALSLALFGWLLTLQPD--------AAFGRVYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIM 104 (109)
T ss_pred hhHHHHHHHHHHHHHHHHhcCCc--------hhhhhHHHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHhe
Q ss_pred H
Q psy15864 319 V 319 (553)
Q Consensus 319 ~ 319 (553)
+
T Consensus 105 ~ 105 (109)
T PRK02237 105 Y 105 (109)
T ss_pred e
No 453
>PRK14209 camphor resistance protein CrcB; Provisional
Probab=20.17 E-value=5e+02 Score=21.36 Aligned_cols=114 Identities=6% Similarity=-0.165 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHhhhhcccCCc---ceeecchhHHHHHHHHHHHHHHhhcccCCCCChhHHHHHHHHHHHHhhhh
Q psy15864 274 FATLLLGVAELGGALLCVVLIHYTGKR---PLALISTGGSAACFIVVAVYAQFHLSYGWDSPLVPTVFLVLAAFLTHICI 350 (553)
Q Consensus 274 ~~~~~~~i~~~~g~~~~g~l~dr~Grr---~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (553)
...+..++++.+|++.=-.+...+.++ ..-...+++-++++++++++.......+.. .+.+.+.++..++
T Consensus 3 ~~~l~V~~GG~lGa~~Ry~l~~~~~~~~~~~fP~~Tl~vNi~GsfllG~~~~~~~~~~~~-------~~~~l~tGf~Ggf 75 (124)
T PRK14209 3 SSLLQVALGGALGASARYLTNVGSMRLFGPAFPVGTMIVNVVGSFLMGVLVVVLAHKGNR-------YAPFLMTGMLGGF 75 (124)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHHHHHhhcCHH-------HHHHHHHHHcccc
Q ss_pred ccccceeeccccccchhhh-hhhHHHHHHHHHHHHHHHHhHHHHhh
Q psy15864 351 RLLPWMLIGEVFPNNIRAT-ASGASGSSSYIFAFAVNKLYYPMLDT 395 (553)
Q Consensus 351 ~~~~~~~~~e~~p~~~Rg~-~~~~~~~~~~~~~~i~~~~~~~~~~~ 395 (553)
.+.. ++..|.+.--.++. ..++.+....+...+.....|.....
T Consensus 76 TTFS-Tf~~e~~~l~~~~~~~~a~~y~~~s~~~gl~a~~lG~~l~~ 120 (124)
T PRK14209 76 TTFS-AFSLDAVTLYERGQAGLAAAYVGLSVGLSLAGLMAGMAAVR 120 (124)
T ss_pred hhHH-HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
No 454
>COG4956 Integral membrane protein (PIN domain superfamily) [General function prediction only]
Probab=20.13 E-value=7.3e+02 Score=24.09 Aligned_cols=109 Identities=10% Similarity=0.100 Sum_probs=0.0
Q ss_pred HHHHHHHHHHhhhhhHHHHhhHHHHHHhhCCCCChH--HHHHHHHHHHHHHHHHHhhhhccc-------------CCcce
Q psy15864 238 AIVTSLFFIGQFGGMTTLQTYAVGIFESIHAPLDPY--FATLLLGVAELGGALLCVVLIHYT-------------GKRPL 302 (553)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~--~~~~~~~i~~~~g~~~~g~l~dr~-------------Grr~~ 302 (553)
++-.++..++...+.....+..|.++...+.+.... ....-..+++++..++++|+..+. -.-..
T Consensus 1 ml~~ii~l~~~i~g~~lG~~~~p~ll~~~~~~~~~~~~n~~v~~ligai~~~li~~~~~~~~~~~~~~le~~i~k~~~~~ 80 (356)
T COG4956 1 MLKWIIILLFIIIGAVLGFAVIPELLADLGIQDTAFLNNEYVDALIGAIIFFLISFWFGKYVLNWLKRLEEQIRKLPVTT 80 (356)
T ss_pred CHHHHHHHHHHHHHhhhhHhhHHHHHhhcCcccchhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHH
Q ss_pred eecchhHHHHHHHHHHHHHH--hhcccCCCCChhHHHHHHHHHHHH
Q psy15864 303 ALISTGGSAACFIVVAVYAQ--FHLSYGWDSPLVPTVFLVLAAFLT 346 (553)
Q Consensus 303 l~~~~~~~~i~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 346 (553)
++++.+...++.++..+... .....+--++...++..++++.+.
T Consensus 81 ilf~tiGLiiGLlia~l~~~pL~~~~ip~~~~ii~vi~t~il~y~G 126 (356)
T COG4956 81 ILFGTIGLIIGLLIAVLLSSPLFLLPIPFISTIIPVILTIILAYFG 126 (356)
T ss_pred HHHHHHHHHHHHHHHHHHhhHHhhCCccHHHhHHHHHHHHHHHHHh
No 455
>PF10183 ESSS: ESSS subunit of NADH:ubiquinone oxidoreductase (complex I) ; InterPro: IPR019329 NADH:ubiquinone oxidoreductase (complex I) (1.6.5.3 from EC) is a respiratory-chain enzyme that catalyses the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane (NADH + ubiquinone = NAD+ + ubiquinol) []. Complex I is a major source of reactive oxygen species (ROS) that are predominantly formed by electron transfer from FMNH(2). Complex I is found in bacteria, cyanobacteria (as a NADH-plastoquinone oxidoreductase), archaea [], mitochondira, and in the hydrogenosome, a mitochondria-derived organelle. In general, the bacterial complex consists of 14 different subunits, while the mitochondrial complex contains homologues to these subunits in addition to approximately 31 additional proteins []. Mitochondrial complex I, which is located in the inner mitochondrial membrane, is the largest multimeric respiratory enzyme in the mitochondria, consisting of more than 40 subunits, one FMN co-factor and eight FeS clusters []. The assembly of mitochondrial complex I is an intricate process that requires the cooperation of the nuclear and mitochondrial genomes [, ]. Mitochondrial complex I can cycle between active and deactive forms that can be distinguished by the reactivity towards divalent cations and thiol-reactive agents. All redox prosthetic groups reside in the peripheral arm of the L-shaped structure. The NADH oxidation domain harbouring the FMN cofactor is connected via a chain of iron-sulphur clusters to the ubiquinone reduction site that is located in a large pocket formed by the PSST and 49kDa subunits of complex I []. This entry represents the ESSS subunit from mitochondrial NADH:ubiquinone oxidoreductase (complex I). It carries mitochondrial import sequences [].
Probab=20.08 E-value=1.2e+02 Score=24.18 Aligned_cols=26 Identities=8% Similarity=0.169 Sum_probs=0.0
Q ss_pred chHHHHHHHHHHHHHHHHHhcc-ccCC
Q psy15864 142 HWRSAAILNLLFPILALCALYF-IPES 167 (553)
Q Consensus 142 gWr~~f~i~~i~~li~~i~~~~-lpEs 167 (553)
+|+.+|++...++++++.+.+. .|++
T Consensus 58 ~we~~~f~~~~~~~v~~~~~~~y~PD~ 84 (105)
T PF10183_consen 58 GWELPFFFGFSGSLVFGGVFLAYKPDT 84 (105)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHcCCCC
No 456
>PRK11875 psbT photosystem II reaction center protein T; Reviewed
Probab=20.08 E-value=1.8e+02 Score=17.20 Aligned_cols=25 Identities=24% Similarity=0.280 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHhccccCCce
Q psy15864 145 SAAILNLLFPILALCALYFIPESPH 169 (553)
Q Consensus 145 ~~f~i~~i~~li~~i~~~~lpEsp~ 169 (553)
.++.+..+.++..+....++.|+|+
T Consensus 4 l~Ytfll~~tlgiiFFAIfFRepPr 28 (31)
T PRK11875 4 FAYILILTLALVTLFFAIAFRDPPK 28 (31)
T ss_pred HHHHHHHHHHHHHHHHhhhccCCCC
No 457
>TIGR03173 pbuX xanthine permease. All the seed members of this model are observed adjacent to genes for either xanthine phosphoribosyltransferase (for the conversion of xanthine to guanine, GenProp0696, ) or genes for the conversion of xanthine to urate and its concomitant catabolism (GenProp0640, GenProp0688, GenProp0686 and GenProp0687). A number of sequences scoring higher than trusted to this model are found in different genomic contexts, and the possibility exist that these transport related compounds in addition to or instead of xanthine itself. The outgroup to this family are sequences which are characterized as uracil permeases or are adjacent to established uracil phosphoribosyltransferases.
Probab=20.05 E-value=9.2e+02 Score=24.45 Aligned_cols=154 Identities=14% Similarity=-0.090 Sum_probs=0.0
Q ss_pred HHhhhhhHHHHhhHHHHHHhh-CCCCChH-HHHHHHHHHHHHHHHHHhhhhcccCCcceeecchhHHHHHHHHHHHHHHh
Q psy15864 246 IGQFGGMTTLQTYAVGIFESI-HAPLDPY-FATLLLGVAELGGALLCVVLIHYTGKRPLALISTGGSAACFIVVAVYAQF 323 (553)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~-g~~~~~~-~~~~~~~i~~~~g~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~ 323 (553)
+++....+.-....|.+.... |.+.+.. .......++..+++++-.+-.-.+|.|..+..+.....++......
T Consensus 2 ~Qh~l~~~~~~i~~p~i~~~a~gl~~~~~~~~i~at~l~sgi~tllq~~~~~~~G~~~P~~~g~s~a~~~~~~~~~---- 77 (406)
T TIGR03173 2 LQHVLAMYAGAVAVPLIVGGALGLSAEQTAYLISADLFACGIATLIQTLGIGPFGIRLPVVQGVSFAAVGPMIAIG---- 77 (406)
T ss_pred ccchHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHhccccccCCccceeecCcHHHHHHHHHHh----
Q ss_pred hcccCCCCChhHHHHHHHHHHHHhhhhccccceeeccccccchhhhhhhHHHHHHHHHHHHHHHHhHHHHh-----hccc
Q psy15864 324 HLSYGWDSPLVPTVFLVLAAFLTHICIRLLPWMLIGEVFPNNIRATASGASGSSSYIFAFAVNKLYYPMLD-----TFHL 398 (553)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~~~~i~~~~~~~~~~-----~~g~ 398 (553)
....+....+..+.........+... -.+.+.+|+...|. ....+|-.+.+........ ..+.
T Consensus 78 -----~~~~~~~~~ga~~v~Gii~illg~~~-~~l~~~iPp~v~G~------~i~~IGl~l~~~~~~~~~g~~~~~~~~~ 145 (406)
T TIGR03173 78 -----AGGGLGAIFGAVIVAGLFVILLAPFF-SKLVRFFPPVVTGT------VITLIGLSLMPVAINWAAGGAGAPDFGS 145 (406)
T ss_pred -----hhhhHHHHHHHHHHHHHHHHHHHHHH-HHHHHHCCcHHHHH------HHHHHHHHHHHHHHHHhccCCCcccccc
Q ss_pred hhhHHHHHHHHHHHHhh
Q psy15864 399 WGTLYFYAAISVVGTLY 415 (553)
Q Consensus 399 ~~~~~~~~~~~~~~~~~ 415 (553)
+..+.+.....++..++
T Consensus 146 ~~~~~l~l~~l~~~il~ 162 (406)
T TIGR03173 146 PQNLGLALLTLVIILLL 162 (406)
T ss_pred hHHHHHHHHHHHHHHHH
No 458
>KOG0163|consensus
Probab=20.03 E-value=85 Score=33.90 Aligned_cols=49 Identities=20% Similarity=0.449 Sum_probs=0.0
Q ss_pred CCCcchhhHhhhhHhhhhhhHHHHHHHHHHHHHHHHhhhhhHhhhhccc
Q psy15864 14 EPTPLDWKKAKKKEKKKKEKKAKKKEKKKEKKKKEKKKKKKKKKKKKKN 62 (553)
Q Consensus 14 ~~~~~~~~k~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 62 (553)
|..++|.+++..++|+..+..++++.+.+..-+.|.++...++.++.++
T Consensus 931 E~~E~ER~rrEaeek~rre~ee~k~~k~e~e~kRK~eEeqr~~qee~e~ 979 (1259)
T KOG0163|consen 931 ELAEAERKRREAEEKRRREEEEKKRAKAEMETKRKAEEEQRKAQEEEER 979 (1259)
T ss_pred HHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHH
Done!