RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy15865
         (156 letters)



>d1m1ca_ e.42.1.1 (A:) L-A virus major coat protein {Saccharomyces
           cerevisiae virus L-A [TaxId: 11008]}
          Length = 651

 Score = 28.4 bits (63), Expect = 0.42
 Identities = 9/50 (18%), Positives = 17/50 (34%)

Query: 102 TTLGLPTIAIPYLSYSIKAIPYQTAGSGSLEKPAPGQIAPDGPPKNALTT 151
             +G+P    PY+ + + A        G+    A  +    G   + L  
Sbjct: 460 VVVGVPVACSPYMIFPVAAFDTANPYCGNFVIKAANKYLRKGAVYDKLEA 509


>d3b77a1 b.55.1.13 (A:14-203) Uncharacterized protein Exig2160
           {Exiguobacterium sibiricum 255-15 [TaxId: 262543]}
          Length = 190

 Score = 25.6 bits (56), Expect = 2.5
 Identities = 8/22 (36%), Positives = 14/22 (63%)

Query: 111 IPYLSYSIKAIPYQTAGSGSLE 132
            PY  Y I+ + ++TAG+  L+
Sbjct: 64  YPYAHYPIRHVMFETAGTVDLD 85


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.321    0.136    0.407 

Gapped
Lambda     K      H
   0.267   0.0623    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 532,317
Number of extensions: 21181
Number of successful extensions: 46
Number of sequences better than 10.0: 1
Number of HSP's gapped: 46
Number of HSP's successfully gapped: 5
Length of query: 156
Length of database: 2,407,596
Length adjustment: 78
Effective length of query: 78
Effective length of database: 1,336,656
Effective search space: 104259168
Effective search space used: 104259168
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 49 (22.9 bits)