BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy15878
(693 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|383859979|ref|XP_003705469.1| PREDICTED: helicase POLQ-like [Megachile rotundata]
Length = 1014
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 270/739 (36%), Positives = 410/739 (55%), Gaps = 69/739 (9%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V EK Q++A A E F +EEYA KG YPP KR+ K SIY+CTIEK LI SLI+E
Sbjct: 284 IVQEKVQAMAPFALELDFLIEEYAASKGAYPPKKRR-KKNSIYMCTIEKALGLINSLIEE 342
Query: 61 NRIDEIGLIVIDEFHMLNEPQ-RGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFI 119
R EIGLIV+DE H++ E RG LE +++K LY+ +++ I MSATIGN+N ++ F+
Sbjct: 343 KRFKEIGLIVVDELHLIGEGGGRGATLEVILTKALYVNETVHIIGMSATIGNLNEIAEFL 402
Query: 120 EGITYVENSRPTKHSEYVTVDKRVFQSFDGKS---LTEIYADNLDYSLTGS--GPDAVLH 174
+ Y N RP + EYV D ++ D KS LT++ N YS + PD +
Sbjct: 403 KADLYTGNFRPVEIKEYVKCDDCIWL-LDLKSEELLTDMKKINYRYSSDAAIIDPDRIGG 461
Query: 175 LVQGNL---MVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLS 231
LV + LIFCSS+ C N+AL L F + +K EK++L+ AL+ E L
Sbjct: 462 LVMDVVPKDSCLIFCSSRKNCENVALLLTKILFKSLEAHKTNEKQNLLNALEREEG--LC 519
Query: 232 TNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS 291
L++ I +GVAYHH+ LTA ERRL+E+A+ AGTL +ICCTSTLAAGVNLPA+RVI+R
Sbjct: 520 PILQKTIRFGVAYHHSGLTAEERRLLEDAFKAGTLCVICCTSTLAAGVNLPARRVILRSP 579
Query: 292 YVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEP-ISS-HM 349
YVG +FI+L+ YKQM GRAGR G+ + GESI++CK + + ++ + + ISS H+
Sbjct: 580 YVGSEFINLSRYKQMSGRAGRAGMGDIGESIIICKN-NELPKVKELLESKMDDCISSLHV 638
Query: 350 DPPTLV-DLILEVVAANLCSSLEDVKTLIKHTLF--YQLKSPEDQQTFLETTLSEIVASL 406
+ + +LIL + ++ + +++ L TL Q + + + +++ ++E++ S
Sbjct: 639 NKDRGINNLILSAILYSIAKTRFELQKLATRTLLNIQQERLGINIKHIVDSAITELLKSG 698
Query: 407 LAS-----------------------------------KGTMLTMNEAGHLSLTSIAKAA 431
+ K ++ MN+ L L ++ +AA
Sbjct: 699 VIKVKDKSKSIDVYQPNITVAIPSQITCPNESDIEKKVKKSIQLMNDT-KLDLCNLGRAA 757
Query: 432 VQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEYRIPSDGILLSRSKVYDRYT 491
++ + +Y DL + + L++ LH+L+LV P + IP + + S YD
Sbjct: 758 MKGCIDIQCAYTLYEDLKKAQEHLVLIDYLHLLYLVTPYDI-IPQ--VKVVGSVYYDVVI 814
Query: 492 KFHPQTLRVAEALGVTENLVALNVTGKL-KDEKKALLCRFFHACILYDVLNFDNHQKVAK 550
++ A LG+ E + G + K+ + ++ RF+ ILYD+ +A+
Sbjct: 815 NLSETQMKTARVLGINEVAITKIRDGLMPKNVEPRVVQRFYVTLILYDLWCQHAVYTIAE 874
Query: 551 MYGIQNSHLQNFLNVTSYFASKVYRFCEELPELWCYKQLLTDLPQTLMYCRAPNLRALMD 610
Y + +QN L+ S FA V RFC+EL E W +K LL + L YC L ALMD
Sbjct: 875 KYQVNRGTVQNLLSAVSTFAFSVVRFCQELDEFWAFKDLLDAFSKKLSYCCPLELEALMD 934
Query: 611 LPGVKIGRARQLLNAGYSSLELIARADAKEMVAKIRHLPLRSARNLISAAKLHFITKMDK 670
LP VKIGRARQL NAG+ +++ IA+ KE++ K+ +L ++A ++I AAKL + K
Sbjct: 935 LPLVKIGRARQLYNAGFKTVQCIAKVQPKELLEKVPYLSKKTATHIIEAAKLIILEK--- 991
Query: 671 VEAMKNLIQNLQKNYDNIV 689
IQNL++ ++I+
Sbjct: 992 -------IQNLEEETEDIL 1003
>gi|291401472|ref|XP_002717082.1| PREDICTED: DNA helicase HEL308 [Oryctolagus cuniculus]
Length = 1054
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 247/704 (35%), Positives = 395/704 (56%), Gaps = 36/704 (5%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V EK L+ E F++EEYAG KG++PP KR+ KKS+Y+ TIEKG L+ SLI+
Sbjct: 346 IVQEKITGLSSFGIELGFFVEEYAGSKGRFPPIKRR-EKKSLYVATIEKGHSLVNSLIET 404
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIE 120
RI +GL+V+DE HM+ E RG ILE ++K+LY K+ QI MSAT+ N+ L F++
Sbjct: 405 GRISSLGLVVVDELHMIGEGSRGAILEMTLAKILYTSKTTQIIGMSATLSNVEDLQEFLQ 464
Query: 121 GITYVENSRPTKHSEYVTVDKRVFQ----SFDGKSLTEIYADNLDYSLTGSGPDAVLHLV 176
Y RP + EY+ ++ R+++ + +G + + + +L PD ++ LV
Sbjct: 465 AEYYTSQFRPVELKEYLKLNDRIYEVDSKAENGMTFSRVLNYKYSDTLKKMDPDHLVALV 524
Query: 177 Q---GNLMVLIFCSSKIACSNLA-LRLQFDRFPGTKEY---KKQEKEDLIEALKEENDGK 229
+ L+FC +K C N+A + +F +KEY +++EK+++I+ LK + G
Sbjct: 525 TEVIPSYSCLVFCPTKKNCENVAEMICKF----LSKEYLKHREKEKDEVIKNLKSISSGT 580
Query: 230 LSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIR 289
L L+ I +GVAYHH+ LT+ ERRL+EEAY +G L + CTSTLAAGVNLPA+RVI+R
Sbjct: 581 LCPVLKHTIPFGVAYHHSGLTSEERRLLEEAYSSGVLCLFTCTSTLAAGVNLPARRVILR 640
Query: 290 DSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHM 349
YV ++F+ N YKQM+GRAGR G+ GESI++ + +D + S +++ PE SH+
Sbjct: 641 APYVAKEFLKRNQYKQMIGRAGRAGIDTIGESILILQE-KDKQQVSELISRPPENCYSHL 699
Query: 350 D---PPTLVDLILEVVAANLCSSLEDVKTLIKHTLF-YQLKSPEDQQTFLETT---LSEI 402
+ L L ++ + ++L D+ + T F Q K +++ E T L +
Sbjct: 700 VQEFTKGIQSLFLSLIGLKIATNLGDIHHFMNGTFFGVQQKILLKEKSLWEVTVESLRHL 759
Query: 403 VASLLASKGTMLTMNEAGH--LSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNS 460
L K T+ +E +T + +A+ + + C I+Y DL L +
Sbjct: 760 TEKGLLQKDTVNNSDEECRCDFHITKLGRASFKGTIDLAYCDILYRDLKKGLEGLVLESF 819
Query: 461 LHMLFLVIPLEYRIPSDGILLSRSKVYDR-YTKFHPQTLRVAEALGVTENLVALNVTGKL 519
LH+++L P + D + VY R +++ P VA LGV+E+ + +G+
Sbjct: 820 LHLIYLTTPYDLVPQYDPDWM----VYFRQFSQLSPAEQSVASRLGVSESFIGKKASGQA 875
Query: 520 KDEK--KALLCRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFC 577
+K K ++ R + + +LY +L N V++ + + ++QN L+ + F+S V FC
Sbjct: 876 IRKKVDKNIVNRLYLSFVLYTLLKETNVWSVSEKFNMPRGYIQNLLSGAASFSSCVLHFC 935
Query: 578 EELPELWCYKQLLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIARAD 637
EEL E W Y+ LL +L + L YC L LM++ GV+ GRA+QL NAGY SL +A AD
Sbjct: 936 EELEEFWVYRALLVELIKKLTYCVKAELIPLMEVTGVQEGRAKQLYNAGYKSLTHLANAD 995
Query: 638 AKEMVAKIRHLPLRSARNLISAAKLHFITKMDKVEAMKNLIQNL 681
+ ++ I HL R A+ ++S+AK+ +K EA++ ++ L
Sbjct: 996 PEVLIRTIDHLSRRQAKQIVSSAKMLL---QEKAEALQEEVEEL 1036
>gi|50746585|ref|XP_420565.1| PREDICTED: helicase, POLQ-like [Gallus gallus]
Length = 1048
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 243/704 (34%), Positives = 391/704 (55%), Gaps = 35/704 (4%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V EK L+ E F +EEYAG KG++PP KR++ KKS+YI TIEKG L+ SLI+
Sbjct: 353 IVQEKVWGLSSFGIELGFLVEEYAGSKGRFPPIKRRI-KKSLYIATIEKGHALVNSLIET 411
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIE 120
+RID++GL+V+DE HM+ E RG +LE ++K+LY K+ + MSAT+ N+ L F++
Sbjct: 412 DRIDDLGLVVVDELHMIGEGSRGAVLEMTLAKILYASKNTHVVGMSATLNNVGDLQKFLQ 471
Query: 121 GITYVENSRPTKHSEYVTVDKRVFQ----SFDGKSLTEIYADNLDYSLTGSGPDAVLHLV 176
Y +N RP + EY+ + +++ + +G + + + SL + PD ++ LV
Sbjct: 472 AEYYTKNFRPVELKEYIKIRDTIYEVDSKAENGFTFSRLLNFKYSSSLEKADPDHIVALV 531
Query: 177 Q---GNLMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTN 233
LIFC +K C N+A + + ++++EK+DLI+ LK+ +G +
Sbjct: 532 TEVIPKYSCLIFCPTKKNCENVATMVCKYLNKEFRAHREKEKQDLIKNLKDIGNGSICPV 591
Query: 234 LEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYV 293
L + I +GVAYHH+ LT ER+ IEEAY G L ++ CT+TLAAGVNLPA+RVI+R YV
Sbjct: 592 LRQTIPFGVAYHHSGLTNDERKSIEEAYSRGVLCLLACTATLAAGVNLPARRVILRAPYV 651
Query: 294 GRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPT 353
+F+ N YKQM+GRAGR G+ +GESI++ + L ++ + E S++ P
Sbjct: 652 ASEFLKKNQYKQMIGRAGRAGIDNAGESILVVQEKDKHL-VRDLITSPLENCYSNLLPEI 710
Query: 354 ---LVDLILEVVAANLCSSLEDVKTLIKHTLFYQLKSPEDQQTFLETTLSEIVASLLAS- 409
+ L+L +V + + E+V + + HTL + + E +LSEIV L +
Sbjct: 711 TKGMQYLLLSLVGLKIAVTQEEVYSFMCHTLLGVQQQLLLK----EKSLSEIVRDELENL 766
Query: 410 ------KGTMLTMNEAGHLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHM 463
KG ++ N L++T + KA + + C ++Y +L L +SLH+
Sbjct: 767 IEKGLLKGKIMDQNSKSTLTVTLLGKATYKGSIDVSYCNLLYKELRKGLEGLVLESSLHL 826
Query: 464 LFLVIPLEY--RIPSDGILLSRSKVYDRYTKFHPQTLRVAEALGVTENLVALNVTGKL-- 519
L+L P + D ++ R ++ + +VA+ +GV E+ +A +G+
Sbjct: 827 LYLATPYDMVSNCSPDWMIYLR-----QFNQLSSAEQKVADMVGVPESFIAKKASGQAIR 881
Query: 520 KDEKKALLCRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEE 579
K+ + R + + +LY +L N V++ + + ++QN L + FAS + FCEE
Sbjct: 882 KNVDSTAVNRLYLSFVLYALLKETNVWSVSEKFNMSRGYVQNLLTSAASFASCILHFCEE 941
Query: 580 LPELWCYKQLLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIARADAK 639
L E W YK LLT+L + L YC L LM++ GV RA+QL NAGY +L +A A+ +
Sbjct: 942 LEEFWVYKALLTELTKRLTYCVKTELIPLMEVAGVLEARAKQLYNAGYKTLAHLANANPE 1001
Query: 640 EMVAKIRHLPLRSARNLISAAKLHFITKMDKVEAMKNLIQNLQK 683
+V I HL R A+ ++S+AK+ +K EA++ ++ L K
Sbjct: 1002 TLVKTIEHLSRRQAKQMVSSAKMLL---SEKAEALQEEVEELLK 1042
>gi|354505767|ref|XP_003514939.1| PREDICTED: helicase POLQ [Cricetulus griseus]
Length = 1012
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 249/703 (35%), Positives = 390/703 (55%), Gaps = 36/703 (5%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V EK SL+ E F++EEYAG KG++PPTKR+ KKS+YI TIEKG L+ +LI+
Sbjct: 306 IVQEKISSLSSFGIELGFFVEEYAGSKGRFPPTKRR-EKKSLYIATIEKGHSLVNALIET 364
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIE 120
RI +GL+V+DE HM+ E RG ILE ++KVLY K+ QI MSAT+ N+ L F++
Sbjct: 365 GRISTLGLVVVDELHMIGEGSRGAILEMTLAKVLYTSKTTQIIGMSATLNNVEDLQEFLK 424
Query: 121 GITYVENSRPTKHSEYVTVDKRVFQ----SFDGKSLTEIYADNLDYSLTGSGPDAVLHLV 176
Y RP + EY+ V+ +++ + +G + + + +L PD ++ LV
Sbjct: 425 AEYYTSQFRPVELKEYLKVNDTIYEVDSRAANGMTFSRLLNYKYSDALRKMDPDHLVALV 484
Query: 177 Q---GNLMVLIFCSSKIACSNLALRLQFDRFPGTKEY---KKQEKEDLIEALKEENDGKL 230
N L+FC SK C N+A L +F +K+Y + +EK ++I+ L+ +GK+
Sbjct: 485 TEVIPNYSCLVFCPSKKNCENVAEMLC--KFL-SKDYLNHRDEEKSEVIKNLRNVGNGKV 541
Query: 231 STNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRD 290
L+ I +GVAYHH+ LT ERRL+EEAY G L + CTSTLAAGVNLPA+RVI+R
Sbjct: 542 CPVLKRTIPFGVAYHHSGLTTDERRLLEEAYSTGVLCLFTCTSTLAAGVNLPARRVILRA 601
Query: 291 SYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMD 350
YV R+F+ N YKQM+GRAGR G+ GESI++ + +D + ++N E SH+
Sbjct: 602 PYVAREFLRRNQYKQMIGRAGRAGIDTVGESILVLQE-KDKQQVLELINGPLENCYSHLI 660
Query: 351 ---PPTLVDLILEVVAANLCSSLEDVKTLIKHTLF-YQLKSPEDQQTFLETTLSEIVASL 406
+ L L ++ + +SL D+ + T F Q K +++ E T+ + S
Sbjct: 661 EEFSKGIQSLFLSLIGLKIATSLGDIYQFMNGTFFGVQQKILLKEKSLWEITVDSL--SY 718
Query: 407 LASKGTMLTMNEA-----GHLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSL 461
L KG + + H +T + +A+ + + C +Y DL L + L
Sbjct: 719 LTEKGLLQKESRGDTELESHFRVTKLGQASFKGAIDLAYCDTLYRDLKKGLEGLVLESLL 778
Query: 462 HMLFLVIPLEYRIPSDGILLSRSKVYDR-YTKFHPQTLRVAEALGVTENLVALNVTGKLK 520
H+++L P + ++ + VY R +++ P VA LGV+E+ + +G+
Sbjct: 779 HLVYLTTPYDLVAQTEPDWM----VYFRQFSQLSPAEQNVAALLGVSESFIGKKASGQAI 834
Query: 521 DEK--KALLCRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCE 578
+K K ++ R + + +LY +L N V++ + + ++QN L + F+S V FCE
Sbjct: 835 RKKVDKNIVNRLYLSFVLYSLLKETNIWSVSEKFNMPRGYIQNLLTGAASFSSCVLHFCE 894
Query: 579 ELPELWCYKQLLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIARADA 638
EL E W YK LL +L + L YC L LM++ GV GRA+QL +AGY S+ +A A+
Sbjct: 895 ELEEFWVYKALLVELTKKLTYCVKAELIPLMEVTGVLEGRAKQLYSAGYKSVMHLANANP 954
Query: 639 KEMVAKIRHLPLRSARNLISAAKLHFITKMDKVEAMKNLIQNL 681
+ +V I HL R A+ ++S+AK+ +K EA++ ++ L
Sbjct: 955 EVLVRTIGHLSRRQAKQIVSSAKMLL---HEKAEALQEEVEEL 994
>gi|345494548|ref|XP_003427318.1| PREDICTED: helicase POLQ-like isoform 1 [Nasonia vitripennis]
Length = 975
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 260/741 (35%), Positives = 400/741 (53%), Gaps = 68/741 (9%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V EK QSL A F +EEYA KG YPP KR+ K SIYICTIEK ++ LI+
Sbjct: 247 LVQEKIQSLTPFALALNFLVEEYAAEKGHYPPKKRR-KKNSIYICTIEKAQSIVNCLIEL 305
Query: 61 NRIDEIGLIVIDEFHMLN-EPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFI 119
R++EIG+IVIDE H+L RG LEC+++KV+++ ++ I MSATIGN+ +S ++
Sbjct: 306 GRLNEIGIIVIDELHLLGANGGRGATLECLLTKVMHVNSNVHIVGMSATIGNLKEISDYL 365
Query: 120 EGITYVENSRPTKHSEYVTVDKRVF--QSFDGKSLTEIYADNLDYSLTG--SGPDAVLHL 175
Y +N RP EYV + ++ + + T+ +YS PD + L
Sbjct: 366 NAELYTQNFRPVAIKEYVKCEGNIWLIDTREENIFTDKKTIKYNYSQKALQVDPDFLGGL 425
Query: 176 VQG---NLMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLST 232
V LIFCSSK C N+A+ L + +K EK L+ AL+ E G +
Sbjct: 426 VMDVAPKDSCLIFCSSKKNCENVAVLLTQVLLKSVEVHKADEKIKLLNALETET-GSICP 484
Query: 233 NLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSY 292
L++ I +GVAYHH+ LTA ERRL+EEA+ +G L +ICCTSTLAAGVNLPA+RVI R Y
Sbjct: 485 VLKKTIKFGVAYHHSGLTAEERRLLEEAFRSGILCVICCTSTLAAGVNLPARRVIFRSPY 544
Query: 293 VGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISS--HMD 350
VG +F++++ YKQM+GRAGR G+ E GESI++C T +D + ++ + + S H++
Sbjct: 545 VGTEFLNMSRYKQMIGRAGRAGISEIGESILIC-TKRDSEKVRELLRSKMDDSLSTLHIE 603
Query: 351 PPTLV-DLILEVVAANLCSSLEDVKTLIKHTLF--------------------------- 382
V +LI+ V ++ ++ D+ ++ TL
Sbjct: 604 KDRGVNNLIISSVLLSIATTRADILNIMSKTLLKVQENRLGISVKEVTDKALTTLLKSGI 663
Query: 383 YQLKSPEDQQTF------------LETTLSEIVASLLASKGTMLTMNEAGHLSLTSIAKA 430
++K + ++ F + T+ ++ S+ K +T+ + L L + +A
Sbjct: 664 LRVKQKQTKEVFSKLDSTVIFPSQINTSNDDVTTSVKKEKKNYITLVNSTELELCPLGRA 723
Query: 431 AVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEY--RIPSDGILLSRSKVYD 488
A++ + +Y DL + N L++ LH+L+L+ P + ++ G + YD
Sbjct: 724 AMKGSIDLQSAHTLYEDLKKAQANLVLVDYLHLLYLITPYDVACQVKPVGTVY-----YD 778
Query: 489 RYTKFHPQTLRVAEALGVTENLV---ALNVTGKLKDEKKALLCRFFHACILYDVLNFDNH 545
P ++VA LG+ E V +T K D++ ++ RF+ +L ++ N +
Sbjct: 779 VMMSLPPHQMKVARLLGINEAAVDRLRAGITPKNVDQR--IVQRFYVTLMLNELWNRRSI 836
Query: 546 QKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELWCYKQLLTDLPQTLMYCRAPNL 605
VA Y + +QN L++ S F+S V RFC+EL E W +K LL+ Q L YC A L
Sbjct: 837 YFVADKYQVNRGTIQNLLSLASSFSSSVVRFCDELDEFWAFKDLLSTFGQKLTYCCASEL 896
Query: 606 RALMDLPGVKIGRARQLLNAGYSSLELIARADAKEMVAKIRHLPLRSARNLISAAKLHFI 665
LMDLP VKIGRA+QL AG+ SL+ IA+A ++M+ KI HLP R +IS+AKL
Sbjct: 897 EPLMDLPYVKIGRAKQLYKAGFKSLQSIAKAKPEDMMDKIEHLPRRVVSQIISSAKLLL- 955
Query: 666 TKMDKVEAMKNLIQNLQKNYD 686
++KVE +++ ++ + D
Sbjct: 956 --LEKVENLRDEVEEVLDGLD 974
>gi|391332508|ref|XP_003740676.1| PREDICTED: helicase POLQ-like [Metaseiulus occidentalis]
Length = 851
Score = 397 bits (1020), Expect = e-107, Method: Compositional matrix adjust.
Identities = 247/688 (35%), Positives = 389/688 (56%), Gaps = 39/688 (5%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V EK ++LA E F +EEYAG G+ PP KR+ + SIY+ TIEK LI +LI+
Sbjct: 174 IVQEKVRALANLGIELGFLVEEYAGSIGKIPPVKRK-KRPSIYVATIEKAHFLINALIEA 232
Query: 61 NRIDEIGLIVIDEFHMLNE-PQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFI 119
R++E+GL++IDE HM+ + QRG LE ++ K+ + + Q+ MSATIGNIN ++ F+
Sbjct: 233 QRLEELGLVIIDELHMIGDGSQRGAGLEVLLVKLKKMSNA-QLIGMSATIGNINEVAGFL 291
Query: 120 EGITYVENSRPTKHSEYVTVDKRVFQ---SFD---GKSLTEIYADNLDYSLTGSGPDAVL 173
Y+ + RP + E++ V++ V + SF+ + LT ++ + PD V
Sbjct: 292 NAEIYLGSFRPVELIEHILVERTVLEVTKSFELRLKRKLTRPTSEEQE----KCDPDHVT 347
Query: 174 HLVQGNL---MVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKL 230
LV+ + VL+FC ++ C ++AL L P ++++ + K L++AL E G++
Sbjct: 348 ILVEELIPTSSVLVFCPTRKNCESVALNLSRFLKPELRDFRVENKIGLLKALSAEA-GRI 406
Query: 231 STNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRD 290
L + I +GVAYHH+ LT ER+L+EEAY+ GTL +CCTSTLAAGVNLPA+RVI++
Sbjct: 407 CPVLRKTIPFGVAYHHSGLTNDERKLVEEAYIVGTLSCLCCTSTLAAGVNLPAKRVILKS 466
Query: 291 SYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPIS---S 347
YVG +F++ YKQM+GRAGR GL SGESI++CK SS+M PI S
Sbjct: 467 PYVGVEFLTSARYKQMIGRAGRAGLDSSGESILICKASTR----SSVMKLLRSPIEHCRS 522
Query: 348 HMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQLKSPEDQQTFLETTLSEIVASLL 407
+ TL L + VV + +S ++ + + +LF Q S D + E++ SL
Sbjct: 523 SVTLETLEALAISVVGMGVVTSTAGLEDIYRESLFCQQNSERDASELVH----EVIQSLE 578
Query: 408 ASKGTMLTMNEAGHLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLV 467
A K ++ ++E G L+ + + +A+ + + ++ DL + L LH+++L+
Sbjct: 579 AEK--LIFVDEKGKLTASPLGRASFKGVVEPHRVTSLHRDLRMAMAHLSLTTHLHLIYLI 636
Query: 468 IPLEYRIPS--DGILLSRSKVYDRYTKFHPQTLRVAEALGVTENLVA-LNVTGKLKDEKK 524
P + PS DG+L D Y + + +VAE +G+TENLV L + +KD ++
Sbjct: 637 SPSDME-PSRLDGMLY-----MDLYNELTEEDRQVAETIGITENLVVRLRLNKPIKDHER 690
Query: 525 ALLCRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELW 584
LL +F+ L + N +VA + +QN L++ + A + +FC +LPE W
Sbjct: 691 KLLSKFYVTLQLNALWKKQNVWQVADRFEEHRGSVQNLLSMATVNAMSISQFCSDLPEFW 750
Query: 585 CYKQLLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIARADAKEMVAK 644
+ LL L +C + L LM+LP VK GRARQL AGY + IA+AD KE+V K
Sbjct: 751 ALRDLLPSFVNELSHCSSMELMKLMELPAVKRGRARQLYTAGYRKVSDIAKADPKELVEK 810
Query: 645 IRHLPLRSARNLISAAKLHFITKMDKVE 672
+ H+P A +++AAK + + K + ++
Sbjct: 811 LDHMPCNVAAQIVAAAKHYLLKKAEDLQ 838
>gi|449269167|gb|EMC79970.1| Helicase POLQ-like protein, partial [Columba livia]
Length = 1000
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 254/713 (35%), Positives = 389/713 (54%), Gaps = 51/713 (7%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V EK + L+ E F +EEYAG KG++PP KR++ KKS+YI TIEKG L+ SLI+
Sbjct: 300 IVQEKVRGLSSFGIELGFLVEEYAGSKGRFPPIKRRI-KKSLYIATIEKGHALVNSLIET 358
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIE 120
RID++GL+V+DE HML E RG LE ++K+LY K+ QI MSAT+ N+ L F++
Sbjct: 359 ERIDDLGLVVVDELHMLGEGSRGATLEITLAKILYTSKNTQIIGMSATLNNVEDLQKFLQ 418
Query: 121 GITYVENSRPTKHSEYVTVDKRVF--QSFDGKSLTEIYADNLDYS--LTGSGPDAVLHLV 176
Y N RP K EYV + ++ S K T N YS L + PD ++ LV
Sbjct: 419 AEYYTNNFRPVKLKEYVKIRDTIYAVDSKTEKGFTFSRLLNFKYSSNLQKADPDHIIALV 478
Query: 177 Q---GNLMVLIFCSSKIACSNLA------LRLQFDRFPGTKEYKKQEKEDLIEALKEEND 227
LIFC +K C N+A L+ +F + ++++EK+DLI+ LK +
Sbjct: 479 TEVIPKYSCLIFCPTKKNCENVASMVCKYLQKEF------RAHREKEKQDLIKDLKNIGN 532
Query: 228 GKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVI 287
G + L++ I +GVAYHH+ LT ER+ IEEAY AG L ++ CT+TLAAGVNLPA+RVI
Sbjct: 533 GSVCPVLKQTIPFGVAYHHSGLTNDERKSIEEAYSAGILCLLACTATLAAGVNLPARRVI 592
Query: 288 IRDSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISS 347
+R YV DF+ N YKQM+GRAGR G+ ++GESI++ + L ++++ E S
Sbjct: 593 LRAPYVASDFLKKNQYKQMIGRAGRAGIDDAGESILIVQEKDRHL-VQDLVSSPLENCYS 651
Query: 348 HM---DPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQLKSPEDQQTFLETTLSEIV- 403
++ + L+L +V + + E+V + TL + Q + +LSEI+
Sbjct: 652 NLLLELTKGMQSLLLSLVGLKIAVTHEEVSNFMCSTLL----GVQQQLLSKDKSLSEIIK 707
Query: 404 --------ASLLASKGTMLTMNEAGHLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNF 455
LL + + N L++T + KA + + C ++Y +L
Sbjct: 708 DGLENLIQKGLLRGRTSEKDHNSKCTLTVTPLGKATYKGSIDLAYCNLLYRELKKGLEGL 767
Query: 456 CLLNSLHMLFLVIPLEYR---IPSDGILLSRSKVYDRYTKFHPQTLRVAEALGVTENLVA 512
L ++LH+L+L P + P I L ++ + +VA+ +GV E+ +
Sbjct: 768 ILESNLHLLYLATPYDMTSNCSPDWMIYLK------QFNQLSAAEQKVADVVGVPESFII 821
Query: 513 LNVTGKL--KDEKKALLCRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFA 570
+G+ K+ A++ R + +LY +L N V++ + + ++QN L+ + FA
Sbjct: 822 KKASGQAIRKNMDSAVVNRLYLTFVLYALLKETNVWSVSEKFNMSRGYVQNLLSSAASFA 881
Query: 571 SKVYRFCEELPELWCYKQLLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSL 630
S V FCEEL E W YK LLT+L + L YC L LM++ GV RA+QL NAGY +L
Sbjct: 882 SCVLHFCEELEEFWVYKALLTELTKQLTYCVKTELIPLMEVAGVLEARAKQLYNAGYKTL 941
Query: 631 ELIARADAKEMVAKIRHLPLRSARNLISAAKLHFITKMDKVEAMKNLIQNLQK 683
+A A+ + +V I HL R A+ +IS+AK+ +K EA++ ++ L K
Sbjct: 942 AHLANANPEILVKVIEHLSRRQAKQIISSAKMLL---SEKAEALQEEVEELLK 991
>gi|344284980|ref|XP_003414242.1| PREDICTED: helicase POLQ [Loxodonta africana]
Length = 1121
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 248/702 (35%), Positives = 392/702 (55%), Gaps = 32/702 (4%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V EK L+ E F++EEYAG KG++PP KR+ KKS+YI TIEKG L+ SLI+
Sbjct: 413 IVQEKISGLSTFGMELGFFVEEYAGSKGRFPPIKRR-EKKSLYIATIEKGHSLVNSLIET 471
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIE 120
RI +GL+V+DE HM+ E RG ILE ++K+LY+ K+ QI MSAT+ N+ L F++
Sbjct: 472 ERISNLGLVVVDELHMIGEGSRGAILEMTLAKILYINKTTQIIGMSATLNNVEDLQEFLQ 531
Query: 121 GITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEI-YADNLDY----SLTGSGPDAVLHL 175
Y RP + EY+ ++ +++ D K+ I ++ L+Y SL PD ++ L
Sbjct: 532 AEYYTNQFRPVELKEYLKINDEIYE-VDSKAENGITFSRLLNYKYSDSLKKMDPDRLIAL 590
Query: 176 VQ---GNLMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLST 232
V N L+FC +K C N+A + G ++K++EK ++I+ LK + G L
Sbjct: 591 VTEVIPNYSCLLFCPTKKNCENVAEMICKFLSKGYLKHKEEEKYEVIKNLKNVSGGSLCP 650
Query: 233 NLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSY 292
L+ I +GVAYHH+ LT+ ER+L+EEAY G L + CTSTLAAGVNLPA+RVI+R Y
Sbjct: 651 VLKRTIPFGVAYHHSGLTSEERKLLEEAYSTGVLCLFTCTSTLAAGVNLPARRVILRAPY 710
Query: 293 VGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMD-- 350
V + F+ N YKQM+GRAGR G+ GESI++ + +D + ++N+ E SH+
Sbjct: 711 VAKKFLKRNQYKQMIGRAGRAGIDTVGESILILQE-KDKQQVLELINSPLENCYSHLVQE 769
Query: 351 -PPTLVDLILEVVAANLCSSLEDVKTLIKHT-LFYQLKSPEDQQTFLETT---LSEIVAS 405
+ L L +V + ++L D+ + T L Q K +++ E T L +
Sbjct: 770 FTKGIQALFLSLVGLKIATNLNDIYHFMSGTFLGVQQKILLKEKSLWEITVESLRYLTEK 829
Query: 406 LLASKGTMLTMNEAGHLS--LTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHM 463
L K T+ E S +T + +A+ + + C I+Y DL L + LH+
Sbjct: 830 GLLQKDTICKSEEEVEYSFHITKLGRASFKGMIDVAYCDILYRDLKKGLEGLVLESLLHL 889
Query: 464 LFLVIPLE--YRIPSDGILLSRSKVYDRYTKFHPQTLRVAEALGVTENLVALNVTGKLKD 521
++L P + ++ D ++ R ++++ P +VA +GV+E+ + +G+
Sbjct: 890 VYLTTPYDMIFQCDPDWMIYFR-----QFSQLSPAEQKVAALVGVSESFIGKKASGQAIK 944
Query: 522 EK--KALLCRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEE 579
+K K ++ R + + IL +L N V++ Y + ++QN L + F+S V FCEE
Sbjct: 945 KKVDKDIVNRLYLSFILNTLLKETNIWSVSEKYNMPRGYIQNLLTGAASFSSCVLHFCEE 1004
Query: 580 LPELWCYKQLLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIARADAK 639
L E W Y+ LL +L + L YC L LM++ GV GRA+QL NAGY SL +A A+ +
Sbjct: 1005 LEEFWVYRALLVELTKKLTYCVKAELIPLMEVTGVLEGRAKQLYNAGYKSLTHLANANPE 1064
Query: 640 EMVAKIRHLPLRSARNLISAAKLHFITKMDKVEAMKNLIQNL 681
++ I HL R A+ ++S+AK+ ++K EA++ ++ L
Sbjct: 1065 VLIRTIDHLSRRQAKQIVSSAKMLL---LEKAEALQEEVEEL 1103
>gi|148688331|gb|EDL20278.1| mCG128467, isoform CRA_b [Mus musculus]
Length = 1066
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 247/702 (35%), Positives = 384/702 (54%), Gaps = 36/702 (5%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V EK SL+ E F++EEYAG KG++PP KR+ KKS+YI TIEK L+ +LI+
Sbjct: 352 IVQEKISSLSSFGIELGFFVEEYAGSKGRFPPIKRR-EKKSLYIATIEKAHSLVNALIET 410
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIE 120
+R+ +GL+V+DE HM+ E RG ILE ++KVLY K+ QI MSAT+ N+ L F++
Sbjct: 411 SRLSTLGLVVVDELHMIGEGSRGAILEMTLAKVLYTSKTTQIIGMSATLNNVEDLQAFLK 470
Query: 121 GITYVENSRPTKHSEYVTVDKRVF----QSFDGKSLTEIYADNLDYSLTGSGPDAVLHLV 176
Y RP + E++ V+ ++ Q+ DG + + + + +L PD ++ LV
Sbjct: 471 AEYYTSQFRPVELKEFLKVNDTIYEVDSQAADGMTFSRLLSYKYSEALKKMDPDRLVALV 530
Query: 177 Q---GNLMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTN 233
N L+FC SK C N+A L ++++EK ++I++L+ +GK+
Sbjct: 531 TEVIPNYSCLVFCPSKKNCENVAEMLCKFLSKDYLNHREKEKCEVIKSLRNIGNGKVCPV 590
Query: 234 LEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYV 293
L+ + +G+AYHH+ LT+ ER+L+EEAY G L ++ CTSTLAAGVNLPA+RVI+R YV
Sbjct: 591 LKRTVPFGIAYHHSGLTSEERKLLEEAYSTGVLCLLTCTSTLAAGVNLPARRVILRAPYV 650
Query: 294 GRDFISLNMYKQMVGRAGRTGLQESGESIMLC--KTMQDFLRFSSMMNAGP-EPISSHMD 350
F+ N YKQMVGRAGR G+ +GESI+L K Q L S GP E SH+
Sbjct: 651 ANTFLKRNQYKQMVGRAGRAGIDTAGESILLLQEKDKQQVLELIS----GPLETCCSHLV 706
Query: 351 ---PPTLVDLILEVVAANLCSSLEDVKTLIKHTLF-YQLKSPEDQQTFLETTLSEIVASL 406
+ L L ++ + +SL D+ + T F Q K +++ E T+ +
Sbjct: 707 EEFTKGIQALFLSLIGLKIAASLGDIYQFMSGTFFGVQQKILLKEKSLWEITVDAL--EH 764
Query: 407 LASKGTMLTMNEAG-------HLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLN 459
L KG +L + G H +T + +A+ + + C +Y DL L +
Sbjct: 765 LTEKG-LLQKDSCGDNEGLECHFRITKLGQASFKGAIDLAYCDTLYRDLKKGLEGLVLES 823
Query: 460 SLHMLFLVIPLEYRIPSDGILLSRSKVYDRYTKFHPQTLRVAEALGVTENLVALNVTGKL 519
LH+++L P + S+ + + ++ + P VA LGV+E+ + G+
Sbjct: 824 LLHLIYLTTPYDLAAQSEPDWMV---YFKQFGQLSPTEQNVAALLGVSESFIGKKAAGQA 880
Query: 520 KDEKKALLCRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEE 579
K +K ++ R + + +LY +L N V++ + + ++QN L + F+S V FCEE
Sbjct: 881 KVDKN-VVNRLYLSFVLYSLLKETNVWSVSEKFNLPRGYIQNLLMGAASFSSCVLHFCEE 939
Query: 580 LPELWCYKQLLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIARADAK 639
L E W YK LL +L + L YC L LM++ GV GRA+QL NAGY S+ +A A+ +
Sbjct: 940 LEEFWVYKALLVELTKKLTYCVKAELIPLMEVTGVLEGRAKQLYNAGYRSIMHLANANPE 999
Query: 640 EMVAKIRHLPLRSARNLISAAKLHFITKMDKVEAMKNLIQNL 681
+V I HL R AR ++S+AK+ +K EA++ + L
Sbjct: 1000 VLVKTIDHLSRRQARQIVSSAKMLL---HEKAEALQGEAEEL 1038
>gi|326918720|ref|XP_003205636.1| PREDICTED: helicase POLQ-like [Meleagris gallopavo]
Length = 1028
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 241/704 (34%), Positives = 388/704 (55%), Gaps = 37/704 (5%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V EK L+ E F +EEYAG KG++PP KR++ KKS+YI T EKG L+ SLI+
Sbjct: 331 IVQEKVWGLSSFGIELGFLVEEYAGSKGRFPPIKRRI-KKSLYIATTEKGHALVNSLIET 389
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIE 120
+RI+++GL+V+DE HM+ E RG LE ++K+L+ K+I I MSAT+ N+ L F++
Sbjct: 390 DRINDLGLVVVDELHMIGEGSRGATLEMTLAKILHASKNIHIVGMSATLNNVGDLQKFLQ 449
Query: 121 GITYVENSRPTKHSEYVTVDKRVFQ----SFDGKSLTEIYADNLDYSLTGSGPDAVLHLV 176
Y +N RP + EY+ + +++ + +G + + + SL + PD ++ LV
Sbjct: 450 AEYYTKNFRPVELKEYIKIKDTIYEVDSKAENGFTFSRLLNFKYSSSLEKADPDHIIALV 509
Query: 177 Q---GNLMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTN 233
LIFC +K C N+A + + ++++EK+DLI+ LK+ +G +
Sbjct: 510 TEVIPKYSCLIFCPTKKNCENVATMVCKYLNKEFRTHREKEKQDLIKNLKDIGNGSICPV 569
Query: 234 LEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYV 293
L + I +G+AYHH+ LT ER+ IEEAY G L ++ CT+TLAAGVNLPA+RVI+R YV
Sbjct: 570 LRQTIPFGIAYHHSGLTNDERKNIEEAYSRGVLCLLACTATLAAGVNLPARRVILRAPYV 629
Query: 294 GRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPT 353
+F+ N YKQM+GRAGR G+ +GESI++ + L ++ + E S++ P +
Sbjct: 630 ASEFLKKNQYKQMIGRAGRAGIDSAGESILIVQEKDKHL-VQDLITSPLENCYSNLLPES 688
Query: 354 ---LVDLILEVVAANLCSSLEDVKTLIKHTLFYQLKSPEDQQTFLETTLSEIV------- 403
+ L+L +V + + E+V + + HTL + + E +LSEIV
Sbjct: 689 TNGMQYLLLSLVGLKIAVTQEEVYSFMCHTLLGVQQQLLLK----EKSLSEIVRDELENL 744
Query: 404 --ASLLASKGTMLTMNEAGHLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSL 461
LL K N L++T + KA + + C ++Y +L L +SL
Sbjct: 745 IEKGLLERKIMEKDQNPRSTLTITLLGKATYKGSIDVSYCNLLYKELRKGLEGLVLESSL 804
Query: 462 HMLFLVIPLEY--RIPSDGILLSRSKVYDRYTKFHPQTLRVAEALGVTENLVALNVTGKL 519
H+L+L P + D ++ R ++ + RV + +GV E+ +A +G+
Sbjct: 805 HLLYLATPYDMVSNCSPDWMIYLR-----QFNQLSSAEQRVVDMVGVPESFIAKKASGQA 859
Query: 520 --KDEKKALLCRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFC 577
K+ A++ R + + +LY +L N +++ + + ++QN L + FAS V FC
Sbjct: 860 IRKNVDTAVVNRLYLSFVLYALLKETNIWSISEKFNMSRGYVQNLLTSAASFASCVLHFC 919
Query: 578 EELPELWCYKQLLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIARAD 637
EEL E W YK LLT+L + L YC L LM++ GV RA+QL NAGY +L +A A+
Sbjct: 920 EELEEFWVYKALLTELTKRLTYCVKTELIPLMEVAGVLEARAKQLYNAGYKTLAHLANAN 979
Query: 638 AKEMVAKIRHLPLRSARNLISAAKLHFITKMDKVEAMKNLIQNL 681
+ +V I HL R A+ ++S+AK+ +K EA++ ++ L
Sbjct: 980 PETLVKTIEHLSRRQAKQMVSSAKMLLT---EKAEALQEEVEEL 1020
>gi|281604129|ref|NP_001014156.2| helicase, POLQ-like [Rattus norvegicus]
gi|149046780|gb|EDL99554.1| rCG37823, isoform CRA_c [Rattus norvegicus]
Length = 1065
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 242/683 (35%), Positives = 377/683 (55%), Gaps = 30/683 (4%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V EK SL+ E F++EEYAG KG++PP KR+ KKS+YI TIEKG L+ +LI+
Sbjct: 348 IVQEKISSLSSFGIELGFFVEEYAGSKGRFPPIKRR-EKKSLYIATIEKGHSLVNALIET 406
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIE 120
R+ +GL+V+DE HM+ E RG LE ++KVLY K+ QI MSAT+ N+ L F++
Sbjct: 407 GRMGTLGLVVVDELHMIGEGSRGATLEMTLAKVLYTSKTTQIIGMSATLNNVEDLQAFLK 466
Query: 121 GITYVENSRPTKHSEYVTVDKRVFQ----SFDGKSLTEIYADNLDYSLTGSGPDAVLHLV 176
Y RP + E++ V+ +++ + DG + + + +L PD ++ LV
Sbjct: 467 AEYYTSQFRPVELKEFLKVNDTIYEVDSRAVDGMTFSRLLNYKYSDALKKVDPDRLVALV 526
Query: 177 Q---GNLMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTN 233
N L+FC SK C N+A L ++++EK +LI++L+ GK+
Sbjct: 527 TEVIPNYSCLVFCPSKKNCENVAEMLCKFLSRDYLNHREEEKGELIKSLRNVGHGKVCPV 586
Query: 234 LEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYV 293
L+ I +GVAYHH+ LT+ ER+L+EEAY G L + CTSTLAAGVNLPA+RVI+R YV
Sbjct: 587 LKRTIPFGVAYHHSGLTSDERKLLEEAYSTGVLCLFTCTSTLAAGVNLPARRVILRAPYV 646
Query: 294 GRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMD--- 350
F+ N YKQM+GRAGR G+ +GESI+L + +D + ++N E SH+
Sbjct: 647 ANTFLKRNQYKQMIGRAGRAGIDTAGESILLLQE-KDKQQVLGLINGPLEDCHSHLVEEF 705
Query: 351 PPTLVDLILEVVAANLCSSLEDVKTLIKHTLF-YQLKSPEDQQTFLETTLSEIVASLLAS 409
+ L L ++ + SL D+ + TLF Q K+ +++ E T+ + L
Sbjct: 706 TKGIQSLFLSLIGLKIAESLGDIYQFMNGTLFGVQQKTLLREKSLWEVTVGAL--EHLTE 763
Query: 410 KGTMLTMNEAG-------HLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLH 462
KG +L + G H +T + +A+ + + C +Y DL L + LH
Sbjct: 764 KG-LLQKDSHGSPEESRCHFRITKLGQASFKGAIDLTYCDTLYRDLKKGLEGLVLESLLH 822
Query: 463 MLFLVIPLEYRIPSDGILLSRSKVYDR-YTKFHPQTLRVAEALGVTENLVALNVTGKLKD 521
+++L P + S+ + VY R +++ P VA LG++E+ + +G+
Sbjct: 823 LVYLTTPYDLAAQSEPDWM----VYFRQFSQLSPAEQSVATLLGISESFIGRKASGQAIR 878
Query: 522 EK--KALLCRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEE 579
+K K + R + + +LY +L N V++ + + ++QN L + F+S V FCEE
Sbjct: 879 KKVDKNAVNRLYLSFVLYSLLKETNVWSVSERFNMPRGYIQNLLMGAASFSSCVLHFCEE 938
Query: 580 LPELWCYKQLLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIARADAK 639
L E W YK LLT+L + L YC L LM++ GV GRA+QL +AGY S+ +A A+ +
Sbjct: 939 LEEFWVYKALLTELTKKLTYCVKAELIPLMEVTGVLEGRAKQLYSAGYRSVVHLANANPE 998
Query: 640 EMVAKIRHLPLRSARNLISAAKL 662
+V I HL R A+ ++S+AK+
Sbjct: 999 VLVKTIDHLSRRQAKQIVSSAKM 1021
>gi|52139047|gb|AAH82601.1| Helicase, mus308-like (Drosophila) [Mus musculus]
Length = 1069
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 247/704 (35%), Positives = 384/704 (54%), Gaps = 37/704 (5%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V EK SL+ E F++EEYAG KG++PP KR+ KKS+YI TIEK L+ +LI+
Sbjct: 352 IVQEKISSLSSFGIELGFFVEEYAGSKGRFPPIKRR-EKKSLYIATIEKAHSLVNALIET 410
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIE 120
+R+ +GL+V+DE HM+ E RG ILE ++KVLY K+ QI MSAT+ N+ L F++
Sbjct: 411 SRLSTLGLVVVDELHMIGEGSRGAILEMTLAKVLYTSKTTQIIGMSATLNNVEDLQAFLK 470
Query: 121 GITYVENSRPTKHSEYVTVDKRVF----QSFDGKSLTEIYADNLDYSLTGSGPDAVLHLV 176
Y RP + E++ V+ ++ Q+ DG + + + + +L PD ++ LV
Sbjct: 471 AEYYTSQFRPVELKEFLKVNDTIYEVDSQAADGMTFSRLLSYKYSEALKKMDPDRLVALV 530
Query: 177 Q---GNLMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTN 233
N L+FC SK C N+A L ++++EK ++I++L+ +GK+
Sbjct: 531 TEVIPNYSCLVFCPSKKNCENVAEMLCKFLSKDYLNHREKEKCEVIKSLRNIGNGKVCPV 590
Query: 234 LEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYV 293
L+ + +G+AYHH+ LT+ ER+L+EEAY G L ++ CTSTLAAGVNLPA+RVI+R YV
Sbjct: 591 LKRTVPFGIAYHHSGLTSEERKLLEEAYSTGVLCLLTCTSTLAAGVNLPARRVILRSPYV 650
Query: 294 GRDFISLNMYKQMVGRAGRTGLQESGESIMLC--KTMQDFLRFSSMMNAGP-EPISSHMD 350
F+ N YKQMVGRAGR G+ +GESI+L K Q L S GP E SH+
Sbjct: 651 ANTFLKRNQYKQMVGRAGRAGIDTAGESILLLQEKDKQQVLELIS----GPLETCCSHLV 706
Query: 351 ---PPTLVDLILEVVAANLCSSLEDVKTLIKHTLF-YQLKSPEDQQTFLETTLSEIVASL 406
+ L L ++ + +SL D+ + T F Q K +++ E T+ +
Sbjct: 707 EEFTKGIQALFLSLIGLKIAASLGDIYQFMSGTFFGVQQKILLKEKSLWEITVDAL--EH 764
Query: 407 LASKGTMLTMNEAG-------HLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLN 459
L KG +L + G H +T + +A+ + + C +Y DL L +
Sbjct: 765 LTEKG-LLQKDSCGDNEGLECHFRITKLGQASFKGAIDLAYCDTLYRDLKKGLEGLVLES 823
Query: 460 SLHMLFLVIPLEYRIPSDGILLSRSKVYDRYTKFHPQTLRVAEALGVTENLVALNVTGKL 519
LH+++L P + S+ + + ++ + P VA LGV+E+ + G+
Sbjct: 824 LLHLIYLTTPYDLAAQSEPDWMV---YFKQFGQLSPTEQNVAALLGVSESFIGKKAAGQA 880
Query: 520 KDEK--KALLCRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFC 577
+K K ++ R + + +LY +L N V++ + + ++QN L + F+S V FC
Sbjct: 881 VRKKVDKNVVNRLYLSFVLYSLLKETNVWSVSEKFNLPRGYIQNLLMGAASFSSCVLHFC 940
Query: 578 EELPELWCYKQLLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIARAD 637
EEL E W YK LL +L + L YC L LM++ GV GRA+QL NAGY S+ +A A+
Sbjct: 941 EELEEFWVYKALLVELTKKLTYCVKAELIPLMEVTGVLEGRAKQLYNAGYRSIMHLANAN 1000
Query: 638 AKEMVAKIRHLPLRSARNLISAAKLHFITKMDKVEAMKNLIQNL 681
+ +V I HL R AR ++S+AK+ +K EA++ + L
Sbjct: 1001 PEVLVKTIDHLSRRQARQIVSSAKMLL---HEKAEALQGEAEEL 1041
>gi|426231978|ref|XP_004010013.1| PREDICTED: helicase POLQ-like [Ovis aries]
Length = 1090
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 241/700 (34%), Positives = 386/700 (55%), Gaps = 28/700 (4%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V EK L+ E F++EEYAG KG++PP KR+ KKS+YI TIEKG L+ SLI+
Sbjct: 382 IVQEKISGLSSFGIELGFFVEEYAGSKGKFPPIKRR-EKKSLYIATIEKGHSLVNSLIET 440
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIE 120
RI +GL+V+DE HM+ E RG ILE ++K+LY K+ QI MSAT+ N+ L F++
Sbjct: 441 GRISSLGLVVVDELHMIGEGTRGAILEMTLAKILYTSKTTQIIGMSATLNNVEDLQKFLQ 500
Query: 121 GITYVENSRPTKHSEYVTVDKRVFQ----SFDGKSLTEIYADNLDYSLTGSGPDAVLHLV 176
Y RP + EY+ ++ +++ + +G + + + +L PD ++ LV
Sbjct: 501 AEYYTSQFRPVELKEYLKINDTIYEVDSRAENGMTFSRLLNYKYSDTLKKMDPDHLVALV 560
Query: 177 Q---GNLMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTN 233
N L+FC +K C N+A + ++K++EK+++I LK + G L
Sbjct: 561 TEVIPNYSCLVFCPTKKNCENVAEMICKSLSKECLKHKEKEKQEVIMNLKNVSGGNLCRV 620
Query: 234 LEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYV 293
L+ I +GVAYHH+ LT+ ER+L+EEAY G L + CTSTLAAGVNLPA+RVI+R YV
Sbjct: 621 LKRTIPFGVAYHHSGLTSDERKLLEEAYSTGVLCLFTCTSTLAAGVNLPARRVILRAPYV 680
Query: 294 GRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMD--- 350
++F+ N YKQM+GRAGR G+ GESI++ + +D + +++ E SH+
Sbjct: 681 AKEFLKRNQYKQMIGRAGRAGIDSVGESILILQE-KDKQQVLELISKPLENCYSHLVQEF 739
Query: 351 PPTLVDLILEVVAANLCSSLEDVKTLIKHTLF-YQLKSPEDQQTFLETTLSE---IVASL 406
+ L L ++ + ++L+D+ + TLF Q K +++ E T+ +
Sbjct: 740 TKGIQTLFLSLIGLKIATNLDDIYHFMSGTLFGVQQKVLLKEKSLWEITMESLRYLTEKG 799
Query: 407 LASKGTMLTMNE--AGHLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHML 464
L K TM E + +T + +A+ + + C I+Y DL L + LH++
Sbjct: 800 LLRKDTMYGSEEEFQNNFHITKLGRASFKGTIDLAYCDILYRDLKKGLEGLVLESLLHLI 859
Query: 465 FLVIPLEYRIPSDGILLSRSKVYDR-YTKFHPQTLRVAEALGVTENLVALNVTGKLKDEK 523
+L P + D + +Y R + + P VA +GV+EN + +G+ +K
Sbjct: 860 YLTTPYDMASQCDPDWM----IYFRQFNQLSPAEQNVAALVGVSENYIGKKASGQAIRKK 915
Query: 524 --KALLCRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELP 581
K ++ R + + ILY +L N V++ + + ++Q+ L+ + F+S V FCEEL
Sbjct: 916 VDKNIVNRLYLSFILYTLLKETNIWSVSEKFNMPRGYIQSLLSAAAAFSSCVLHFCEELE 975
Query: 582 ELWCYKQLLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIARADAKEM 641
E W Y+ LL +L + L YC L LM++ GV GRARQL +AGY SL +A A+ + +
Sbjct: 976 EFWVYRALLGELTKKLTYCVKAELIPLMEVTGVLEGRARQLYSAGYKSLTHLANANPEVL 1035
Query: 642 VAKIRHLPLRSARNLISAAKLHFITKMDKVEAMKNLIQNL 681
+ I HL R A+ ++S+AK+ +K EA++ ++ L
Sbjct: 1036 IRTIDHLSRRQAKQIVSSAKMLL---HEKAEALQEEVEEL 1072
>gi|410306630|gb|JAA31915.1| helicase, POLQ-like [Pan troglodytes]
Length = 1120
Score = 394 bits (1011), Expect = e-106, Method: Compositional matrix adjust.
Identities = 249/705 (35%), Positives = 391/705 (55%), Gaps = 38/705 (5%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V EK L+ E F++EEYAG KG++PPTKR+ KKS+YI TIEKG L+ SLI+
Sbjct: 393 IVQEKISGLSSFGIELGFFVEEYAGSKGRFPPTKRR-EKKSLYIATIEKGHSLVNSLIET 451
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIE 120
RID +GL+V+DE HM+ E RG LE ++K+LY K+ QI MSAT+ N+ L F++
Sbjct: 452 GRIDSLGLVVVDELHMIGEGSRGATLEMTLAKILYTSKTTQIIGMSATLNNVEDLQKFLQ 511
Query: 121 GITYVENSRPTKHSEYVTVDKRVF----QSFDGKSLTEIYADNLDYSLTGSGPDAVLHLV 176
Y RP + EY+ ++ ++ Q+ +G + + + +L PD ++ LV
Sbjct: 512 AEYYTSQFRPVELKEYLKINDTIYEVDSQAENGMTFSRLLNYKYSDTLKKMDPDHLVALV 571
Query: 177 Q---GNLMVLIFCSSKIACSNLA-LRLQFDRFPGTKEY---KKQEKEDLIEALKEENDGK 229
N L+FC SK C N+A + +F +KEY K++EK ++I+ LK +G
Sbjct: 572 TEVIPNYSCLVFCPSKKNCENVAEMICKF----LSKEYLKHKEKEKCEVIKNLKNIGNGN 627
Query: 230 LSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIR 289
L L+ I +GVAYHH+ LT+ ER+L+EEAY G L + CTSTLAAGVNLPA+RVI+R
Sbjct: 628 LCPVLKRTIPFGVAYHHSGLTSDERKLLEEAYSTGVLCLFTCTSTLAAGVNLPARRVILR 687
Query: 290 DSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHM 349
YV ++F+ N YKQM+GRAGR G+ GESI++ + +D + ++ E SH+
Sbjct: 688 APYVAKEFLKRNQYKQMIGRAGRAGIDTIGESILILQE-KDKQQVLELITKPLENCYSHL 746
Query: 350 D---PPTLVDLILEVVAANLCSSLEDVKTLIKHTLF-YQLKSPEDQQTFLETT---LSEI 402
+ L L ++ + ++L+D+ + T F Q K +++ E T L +
Sbjct: 747 VQEFTKGIQTLFLSLIGLKIATNLDDIYHFMNGTFFGVQQKVLLKEKSLWEITVESLRYL 806
Query: 403 VASLLASKGTMLTMNEAG--HLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNS 460
L K T+ E + +T + +A+ + + C I+Y DL L +
Sbjct: 807 TEKGLLQKDTIYKSEEEVQYNFHITKLGRASFKGTIDLAYCDILYRDLKKGLEGLVLESL 866
Query: 461 LHMLFLVIP--LEYRIPSDGILLSRSKVYDRYTKFHPQTLRVAEALGVTENLVALNVTGK 518
LH+++L P L + D ++ R ++++ P VA LGV+E+ + +G+
Sbjct: 867 LHLIYLTTPYDLVSQCNPDWMIYFR-----QFSQLSPAEQNVAAILGVSESFIGKKASGQ 921
Query: 519 LKDEK--KALLCRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRF 576
+K K ++ R + + ILY +L N V++ + + ++QN L T+ F+S V F
Sbjct: 922 AIGKKVDKDVVNRLYLSFILYTLLKETNIWTVSEKFNMPRGYIQNLLTGTASFSSCVLHF 981
Query: 577 CEELPELWCYKQLLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIARA 636
CEEL E W Y+ LL +L + L YC L LM++ GV GRA+QL +AGY SL +A A
Sbjct: 982 CEELEEFWVYRALLVELTKKLTYCVKAELIPLMEVTGVLEGRAKQLYSAGYKSLMHLANA 1041
Query: 637 DAKEMVAKIRHLPLRSARNLISAAKLHFITKMDKVEAMKNLIQNL 681
+ + +V I HL R A+ ++S+AK+ +K EA++ ++ L
Sbjct: 1042 NPEVLVRTIDHLSRRQAKQIVSSAKMLL---HEKAEALQEEVEEL 1083
>gi|124487403|ref|NP_001074576.1| helicase POLQ-like [Mus musculus]
gi|123792912|sp|Q2VPA6.2|HELQ_MOUSE RecName: Full=Helicase POLQ-like; AltName: Full=Mus308-like helicase;
AltName: Full=POLQ-like helicase
gi|115344367|gb|AAI09171.2| Helicase, mus308-like (Drosophila) [Mus musculus]
Length = 1069
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 247/704 (35%), Positives = 384/704 (54%), Gaps = 37/704 (5%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V EK SL+ E F++EEYAG KG++PP KR+ KKS+YI TIEK L+ +LI+
Sbjct: 352 IVQEKISSLSSFGIELGFFVEEYAGSKGRFPPIKRR-EKKSLYIATIEKAHSLVNALIET 410
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIE 120
+R+ +GL+V+DE HM+ E RG ILE ++KVLY K+ QI MSAT+ N+ L F++
Sbjct: 411 SRLSTLGLVVVDELHMIGEGSRGAILEMTLAKVLYTSKTTQIIGMSATLNNVEDLQAFLK 470
Query: 121 GITYVENSRPTKHSEYVTVDKRVF----QSFDGKSLTEIYADNLDYSLTGSGPDAVLHLV 176
Y RP + E++ V+ ++ Q+ DG + + + + +L PD ++ LV
Sbjct: 471 AEYYTSQFRPVELKEFLKVNDTIYEVDSQAADGMTFSRLLSYKYSEALKKMDPDRLVALV 530
Query: 177 Q---GNLMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTN 233
N L+FC SK C N+A L ++++EK ++I++L+ +GK+
Sbjct: 531 TEVIPNYSCLVFCPSKKNCENVAEMLCKFLSKDYLNHREKEKCEVIKSLRNIGNGKVCPV 590
Query: 234 LEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYV 293
L+ + +G+AYHH+ LT+ ER+L+EEAY G L ++ CTSTLAAGVNLPA+RVI+R YV
Sbjct: 591 LKRTVPFGIAYHHSGLTSEERKLLEEAYSTGVLCLLTCTSTLAAGVNLPARRVILRAPYV 650
Query: 294 GRDFISLNMYKQMVGRAGRTGLQESGESIMLC--KTMQDFLRFSSMMNAGP-EPISSHMD 350
F+ N YKQMVGRAGR G+ +GESI+L K Q L S GP E SH+
Sbjct: 651 ANTFLKRNQYKQMVGRAGRAGIDTAGESILLLQEKDKQQVLELIS----GPLETCCSHLV 706
Query: 351 ---PPTLVDLILEVVAANLCSSLEDVKTLIKHTLF-YQLKSPEDQQTFLETTLSEIVASL 406
+ L L ++ + +SL D+ + T F Q K +++ E T+ +
Sbjct: 707 EEFTKGIQALFLSLIGLKIAASLGDIYQFMSGTFFGVQQKILLKEKSLWEITVDAL--EH 764
Query: 407 LASKGTMLTMNEAG-------HLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLN 459
L KG +L + G H +T + +A+ + + C +Y DL L +
Sbjct: 765 LTEKG-LLQKDSCGDNEGLECHFRITKLGQASFKGAIDLAYCDTLYRDLKKGLEGLVLES 823
Query: 460 SLHMLFLVIPLEYRIPSDGILLSRSKVYDRYTKFHPQTLRVAEALGVTENLVALNVTGKL 519
LH+++L P + S+ + + ++ + P VA LGV+E+ + G+
Sbjct: 824 LLHLIYLTTPYDLAAQSEPDWMV---YFKQFGQLSPTEQNVAALLGVSESFIGKKAAGQA 880
Query: 520 KDEK--KALLCRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFC 577
+K K ++ R + + +LY +L N V++ + + ++QN L + F+S V FC
Sbjct: 881 VRKKVDKNVVNRLYLSFVLYSLLKETNVWSVSEKFNLPRGYIQNLLMGAASFSSCVLHFC 940
Query: 578 EELPELWCYKQLLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIARAD 637
EEL E W YK LL +L + L YC L LM++ GV GRA+QL NAGY S+ +A A+
Sbjct: 941 EELEEFWVYKALLVELTKKLTYCVKAELIPLMEVTGVLEGRAKQLYNAGYRSIMHLANAN 1000
Query: 638 AKEMVAKIRHLPLRSARNLISAAKLHFITKMDKVEAMKNLIQNL 681
+ +V I HL R AR ++S+AK+ +K EA++ + L
Sbjct: 1001 PEVLVKTIDHLSRRQARQIVSSAKMLL---HEKAEALQGEAEEL 1041
>gi|410335387|gb|JAA36640.1| helicase, POLQ-like [Pan troglodytes]
Length = 1101
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 249/705 (35%), Positives = 391/705 (55%), Gaps = 38/705 (5%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V EK L+ E F++EEYAG KG++PPTKR+ KKS+YI TIEKG L+ SLI+
Sbjct: 393 IVQEKISGLSSFGIELGFFVEEYAGSKGRFPPTKRR-EKKSLYIATIEKGHSLVNSLIET 451
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIE 120
RID +GL+V+DE HM+ E RG LE ++K+LY K+ QI MSAT+ N+ L F++
Sbjct: 452 GRIDSLGLVVVDELHMIGEGSRGATLEMTLAKILYTSKTTQIIGMSATLNNVEDLQKFLQ 511
Query: 121 GITYVENSRPTKHSEYVTVDKRVF----QSFDGKSLTEIYADNLDYSLTGSGPDAVLHLV 176
Y RP + EY+ ++ ++ Q+ +G + + + +L PD ++ LV
Sbjct: 512 AEYYTSQFRPVELKEYLKINDTIYEVDSQAENGMTFSRLLNYKYSDTLKKMDPDHLVALV 571
Query: 177 Q---GNLMVLIFCSSKIACSNLA-LRLQFDRFPGTKEY---KKQEKEDLIEALKEENDGK 229
N L+FC SK C N+A + +F +KEY K++EK ++I+ LK +G
Sbjct: 572 TEVIPNYSCLVFCPSKKNCENVAEMICKF----LSKEYLKHKEKEKCEVIKNLKNIGNGN 627
Query: 230 LSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIR 289
L L+ I +GVAYHH+ LT+ ER+L+EEAY G L + CTSTLAAGVNLPA+RVI+R
Sbjct: 628 LCPVLKRTIPFGVAYHHSGLTSDERKLLEEAYSTGVLCLFTCTSTLAAGVNLPARRVILR 687
Query: 290 DSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHM 349
YV ++F+ N YKQM+GRAGR G+ GESI++ + +D + ++ E SH+
Sbjct: 688 APYVAKEFLKRNQYKQMIGRAGRAGIDTIGESILILQE-KDKQQVLELITKPLENCYSHL 746
Query: 350 D---PPTLVDLILEVVAANLCSSLEDVKTLIKHTLF-YQLKSPEDQQTFLETT---LSEI 402
+ L L ++ + ++L+D+ + T F Q K +++ E T L +
Sbjct: 747 VQEFTKGIQTLFLSLIGLKIATNLDDIYHFMNGTFFGVQQKVLLKEKSLWEITVESLRYL 806
Query: 403 VASLLASKGTMLTMNEAG--HLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNS 460
L K T+ E + +T + +A+ + + C I+Y DL L +
Sbjct: 807 TEKGLLQKDTIYKSEEEVQYNFHITKLGRASFKGTIDLAYCDILYRDLKKGLEGLVLESL 866
Query: 461 LHMLFLVIP--LEYRIPSDGILLSRSKVYDRYTKFHPQTLRVAEALGVTENLVALNVTGK 518
LH+++L P L + D ++ R ++++ P VA LGV+E+ + +G+
Sbjct: 867 LHLIYLTTPYDLVSQCNPDWMIYFR-----QFSQLSPAEQNVAAILGVSESFIGKKASGQ 921
Query: 519 LKDEK--KALLCRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRF 576
+K K ++ R + + ILY +L N V++ + + ++QN L T+ F+S V F
Sbjct: 922 AIGKKVDKDVVNRLYLSFILYTLLKETNIWTVSEKFNMPRGYIQNLLTGTASFSSCVLHF 981
Query: 577 CEELPELWCYKQLLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIARA 636
CEEL E W Y+ LL +L + L YC L LM++ GV GRA+QL +AGY SL +A A
Sbjct: 982 CEELEEFWVYRALLVELTKKLTYCVKAELIPLMEVTGVLEGRAKQLYSAGYKSLMHLANA 1041
Query: 637 DAKEMVAKIRHLPLRSARNLISAAKLHFITKMDKVEAMKNLIQNL 681
+ + +V I HL R A+ ++S+AK+ +K EA++ ++ L
Sbjct: 1042 NPEVLVRTIDHLSRRQAKQIVSSAKMLL---HEKAEALQEEVEEL 1083
>gi|332819388|ref|XP_003310356.1| PREDICTED: LOW QUALITY PROTEIN: helicase POLQ-like [Pan troglodytes]
Length = 1101
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 248/705 (35%), Positives = 391/705 (55%), Gaps = 38/705 (5%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V EK L+ E F++EEYAG KG++PPTKR+ KKS+YI TIEKG L+ SLI+
Sbjct: 393 IVQEKISGLSSFGIELGFFVEEYAGSKGRFPPTKRR-EKKSLYIATIEKGHSLVNSLIET 451
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIE 120
RID +GL+V+DE HM+ E RG LE ++K+LY K+ QI MSAT+ N+ L F++
Sbjct: 452 GRIDSLGLVVVDELHMIGEGSRGATLEMTLAKILYTSKTTQIIGMSATLNNVEDLQKFLQ 511
Query: 121 GITYVENSRPTKHSEYVTVDKRVF----QSFDGKSLTEIYADNLDYSLTGSGPDAVLHLV 176
Y RP + EY+ ++ ++ Q+ +G + + + +L PD ++ LV
Sbjct: 512 AEYYTSQFRPVELKEYLKINDTIYEVDSQAENGMTFSRLLNYKYSDTLKKMDPDHLVALV 571
Query: 177 Q---GNLMVLIFCSSKIACSNLA-LRLQFDRFPGTKEY---KKQEKEDLIEALKEENDGK 229
N L+FC SK C N+A + +F +KEY K++EK ++I+ LK +G
Sbjct: 572 TEVIPNYSCLVFCPSKKNCENVAEMICKF----LSKEYLKHKEKEKCEVIKNLKNIGNGN 627
Query: 230 LSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIR 289
L L+ I +GVAYHH+ LT+ ER+L+EEAY G L + CTSTLAAGVNLPA+RVI+R
Sbjct: 628 LCPVLKRTIPFGVAYHHSGLTSDERKLLEEAYSTGVLCLFTCTSTLAAGVNLPARRVILR 687
Query: 290 DSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHM 349
YV ++F+ N YKQM+GRAGR G+ GESI++ + +D + ++ E SH+
Sbjct: 688 APYVAKEFLKRNQYKQMIGRAGRAGIDTIGESILILQE-KDKQQVLELITKPLENCYSHL 746
Query: 350 D---PPTLVDLILEVVAANLCSSLEDVKTLIKHTLF-YQLKSPEDQQTFLETT---LSEI 402
+ L L ++ + ++L+D+ + T F Q K +++ E T L +
Sbjct: 747 VQEFTKGIQTLFLSLIGLKIATNLDDIYHFMNGTFFGVQQKVLLKEKSLWEITVESLRYL 806
Query: 403 VASLLASKGTMLTMNEAG--HLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNS 460
L K T+ E + +T + +A+ + + C I+Y DL L +
Sbjct: 807 TEKGLLQKDTIYKSEEEVQYNFHITKLGRASFKGTIDLAYCDILYRDLKKGLEGLVLESL 866
Query: 461 LHMLFLVIP--LEYRIPSDGILLSRSKVYDRYTKFHPQTLRVAEALGVTENLVALNVTGK 518
LH+++L P L + D ++ R ++++ P VA LGV+E+ + +G+
Sbjct: 867 LHLIYLTTPYDLVSQCNPDWMIYFR-----QFSQLSPAEQNVAAILGVSESFIGKKASGQ 921
Query: 519 LKDEK--KALLCRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRF 576
+K K ++ R + + +LY +L N V++ + + ++QN L T+ F+S V F
Sbjct: 922 AIGKKVDKDIVNRLYLSFVLYTLLKETNIWTVSEKFNMPRGYIQNLLTGTASFSSCVLHF 981
Query: 577 CEELPELWCYKQLLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIARA 636
CEEL E W Y+ LL +L + L YC L LM++ GV GRA+QL +AGY SL +A A
Sbjct: 982 CEELEEFWVYRALLVELTKKLTYCVKAELIPLMEVTGVLEGRAKQLYSAGYKSLMHLANA 1041
Query: 637 DAKEMVAKIRHLPLRSARNLISAAKLHFITKMDKVEAMKNLIQNL 681
+ + +V I HL R A+ ++S+AK+ +K EA++ ++ L
Sbjct: 1042 NPEVLVRTIDHLSRRQAKQIVSSAKMLL---HEKAEALQEEVEEL 1083
>gi|410255698|gb|JAA15816.1| helicase, POLQ-like [Pan troglodytes]
Length = 1101
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 248/705 (35%), Positives = 391/705 (55%), Gaps = 38/705 (5%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V EK L+ E F++EEYAG KG++PPTKR+ KKS+YI TIEKG L+ SLI+
Sbjct: 393 IVQEKISGLSSFGIELGFFVEEYAGSKGRFPPTKRR-EKKSLYIATIEKGHSLVNSLIET 451
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIE 120
RID +GL+V+DE HM+ E RG LE ++K+LY K+ QI MSAT+ N+ L F++
Sbjct: 452 GRIDSLGLVVVDELHMIGEGSRGATLEMTLAKILYTSKTTQIIGMSATLNNVEDLQKFLQ 511
Query: 121 GITYVENSRPTKHSEYVTVDKRVFQ----SFDGKSLTEIYADNLDYSLTGSGPDAVLHLV 176
Y RP + EY+ ++ +++ + +G + + + +L PD ++ LV
Sbjct: 512 AEYYTSQFRPVELKEYLKINDTIYEVDSKAENGMTFSRLLNYKYSDTLKKMDPDHLVALV 571
Query: 177 Q---GNLMVLIFCSSKIACSNLA-LRLQFDRFPGTKEY---KKQEKEDLIEALKEENDGK 229
N L+FC SK C N+A + +F +KEY K++EK ++I+ LK +G
Sbjct: 572 TEVIPNYSCLVFCPSKKNCENVAEMICKF----LSKEYLKHKEKEKCEVIKNLKNIGNGN 627
Query: 230 LSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIR 289
L L+ I +GVAYHH+ LT+ ER+L+EEAY G L + CTSTLAAGVNLPA+RVI+R
Sbjct: 628 LCPVLKRTIPFGVAYHHSGLTSDERKLLEEAYSTGVLCLFTCTSTLAAGVNLPARRVILR 687
Query: 290 DSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHM 349
YV ++F+ N YKQM+GRAGR G+ GESI++ + +D + ++ E SH+
Sbjct: 688 APYVAKEFLKRNQYKQMIGRAGRAGIDTIGESILILQE-KDKQQVLELITKPLENCYSHL 746
Query: 350 D---PPTLVDLILEVVAANLCSSLEDVKTLIKHTLF-YQLKSPEDQQTFLETT---LSEI 402
+ L L ++ + ++L+D+ + T F Q K +++ E T L +
Sbjct: 747 VQEFTKGIQTLFLSLIGLKIATNLDDIYHFMNGTFFGVQQKVLLKEKSLWEITVESLRYL 806
Query: 403 VASLLASKGTMLTMNEAG--HLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNS 460
L K T+ E + +T + +A+ + + C I+Y DL L +
Sbjct: 807 TEKGLLQKDTIYKSEEEVQYNFHITKLGRASFKGTIDLAYCDILYRDLKKGLEGLVLESL 866
Query: 461 LHMLFLVIP--LEYRIPSDGILLSRSKVYDRYTKFHPQTLRVAEALGVTENLVALNVTGK 518
LH+++L P L + D ++ R ++++ P VA LGV+E+ + +G+
Sbjct: 867 LHLIYLTTPYDLVSQCNPDWMIYFR-----QFSQLSPAEQNVAAILGVSESFIGKKASGQ 921
Query: 519 LKDEK--KALLCRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRF 576
+K K ++ R + + ILY +L N V++ + + ++QN L T+ F+S V F
Sbjct: 922 AIGKKVDKDVVNRLYLSFILYTLLKETNIWTVSEKFNMPRGYIQNLLTGTASFSSCVLHF 981
Query: 577 CEELPELWCYKQLLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIARA 636
CEEL E W Y+ LL +L + L YC L LM++ GV GRA+QL +AGY SL +A A
Sbjct: 982 CEELEEFWVYRALLVELTKKLTYCVKAELIPLMEVTGVLEGRAKQLYSAGYKSLMHLANA 1041
Query: 637 DAKEMVAKIRHLPLRSARNLISAAKLHFITKMDKVEAMKNLIQNL 681
+ + +V I HL R A+ ++S+AK+ +K EA++ ++ L
Sbjct: 1042 NPEVLVRTIDHLSRRQAKQIVSSAKMLL---HEKAEALQEEVEEL 1083
>gi|426344841|ref|XP_004038961.1| PREDICTED: helicase POLQ-like [Gorilla gorilla gorilla]
Length = 1101
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 248/705 (35%), Positives = 391/705 (55%), Gaps = 38/705 (5%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V EK L+ E F++EEYAG KG++PPTKR+ KKS+YI TIEKG L+ SLI+
Sbjct: 393 IVQEKISGLSSFGIELGFFVEEYAGSKGRFPPTKRR-EKKSLYIATIEKGHSLVNSLIET 451
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIE 120
RID +GL+V+DE HM+ E RG LE ++K+LY K+ QI MSAT+ N+ L F++
Sbjct: 452 GRIDSLGLVVVDELHMIGEGSRGATLEMTLAKILYTSKTTQIIGMSATLNNVEDLQKFLQ 511
Query: 121 GITYVENSRPTKHSEYVTVDKRVFQ----SFDGKSLTEIYADNLDYSLTGSGPDAVLHLV 176
Y RP + EY+ ++ +++ + +G + + + +L PD ++ LV
Sbjct: 512 AEYYTSQFRPVELKEYLKINDTIYEVDSKAENGMTFSRLLNYKYSDTLKKMDPDHLVALV 571
Query: 177 Q---GNLMVLIFCSSKIACSNLA-LRLQFDRFPGTKEY---KKQEKEDLIEALKEENDGK 229
N L+FC SK C N+A + +F +KEY K++EK ++I+ LK +G
Sbjct: 572 TEVIPNYSCLVFCPSKKNCENVAEMICKF----LSKEYLKHKEKEKCEVIKNLKNIGNGN 627
Query: 230 LSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIR 289
L L+ I +GVAYHH+ LT+ ER+L+EEAY G L + CTSTLAAGVNLPA+RVIIR
Sbjct: 628 LCPVLKRTIPFGVAYHHSGLTSDERKLLEEAYSTGVLCLFTCTSTLAAGVNLPARRVIIR 687
Query: 290 DSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHM 349
YV ++F+ N YKQM+GRAGR G+ GESI++ + +D + ++ E SH+
Sbjct: 688 APYVAKEFLKRNQYKQMIGRAGRAGIDTIGESILILQE-KDKQQVLELITKPLENCYSHL 746
Query: 350 D---PPTLVDLILEVVAANLCSSLEDVKTLIKHTLF-YQLKSPEDQQTFLETT---LSEI 402
+ L L ++ + ++L+D+ + T F Q K +++ E T L +
Sbjct: 747 VQEFTKGIQTLFLSLIGLKIATNLDDIYHFMNGTFFGVQQKILLKEKSLWEITVESLRYL 806
Query: 403 VASLLASKGTMLTMNEAG--HLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNS 460
L K T+ E + +T + +A+ + + C I+Y DL L +
Sbjct: 807 TEKGLLQKDTIYKSEEEVQYNFHITKLGRASFKGTIDLAYCDILYRDLKKGLEGLVLESL 866
Query: 461 LHMLFLVIP--LEYRIPSDGILLSRSKVYDRYTKFHPQTLRVAEALGVTENLVALNVTGK 518
LH+++L P L + D ++ R ++++ P VA LGV+E+ + +G+
Sbjct: 867 LHLIYLTTPYDLVSQCNPDWMIYFR-----QFSQLSPAEQNVAAILGVSESFIGKKASGQ 921
Query: 519 LKDEK--KALLCRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRF 576
+K K ++ R + + +LY +L N V++ + + ++QN L T+ F+S V F
Sbjct: 922 AIGKKVDKDVVNRLYLSFVLYTLLKETNIWTVSEKFNMPRGYIQNLLTGTASFSSCVLHF 981
Query: 577 CEELPELWCYKQLLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIARA 636
CEEL E W Y+ LL +L + L YC L LM++ GV GRA+QL +AGY SL +A A
Sbjct: 982 CEELEEFWVYRALLVELTKKLTYCVKAELIPLMEVTGVLEGRAKQLYSAGYKSLMHLANA 1041
Query: 637 DAKEMVAKIRHLPLRSARNLISAAKLHFITKMDKVEAMKNLIQNL 681
+ + +V I HL R A+ ++S+AK+ +K EA++ ++ L
Sbjct: 1042 NPEVLVRTIDHLSRRQAKQIVSSAKMLL---HEKAEALQEEVEEL 1083
>gi|312384326|gb|EFR29076.1| hypothetical protein AND_02273 [Anopheles darlingi]
Length = 1206
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 251/748 (33%), Positives = 392/748 (52%), Gaps = 89/748 (11%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+ EK +L+ + E +F LEEY+G KGQ PP +R+ K +I++CTIEK L+ SL++E
Sbjct: 454 LAQEKMIALSPFSIELQFLLEEYSGGKGQCPPRRRR-KKNTIFVCTIEKAMMLMDSLVEE 512
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIE 120
+R +EIG+IVIDE HM+ EP+RG LE +++KV L+ IQI MSATIGN+N ++ F+
Sbjct: 513 SRANEIGMIVIDELHMIGEPRRGACLEMLITKVQALRAGIQIVGMSATIGNLNEVARFML 572
Query: 121 GITYVENSRPTKHSEYVTVDKRVF-----QSFDGKSLTEIYADNL-----DYS--LTGSG 168
Y + RP + EYV + ++ Q ++ +++ + DYS L
Sbjct: 573 ADVYCRDFRPVELQEYVKCGEALYEVRGQQGHGARASEQVFGEKRSLRFEDYSDELRRID 632
Query: 169 PDAVLHL---VQGNLMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEE 225
PD ++ L V N L+FC +K C NL+ L P E++ +EK LI++L E
Sbjct: 633 PDGIVGLILQVIPNGSCLVFCPTKRMCENLSAMLAKHLPPALAEHRAEEKAKLIKSLAE- 691
Query: 226 NDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQR 285
DG ++ L + GVAYHHA LT ERR IE+A+ AG L +I CTSTLAAGVNLPAQR
Sbjct: 692 -DGSVAPILPQSFRVGVAYHHAGLTQDERRTIEDAFRAGVLSLIVCTSTLAAGVNLPAQR 750
Query: 286 VIIRDSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPI 345
VIIR Y+G F++L+ YKQMVGRAGR G E G+SI++C +D + M+ + +
Sbjct: 751 VIIRSPYIGTSFLTLSRYKQMVGRAGRAGFGEKGDSILVC-AQRDIPQVCEMLCSPMDLA 809
Query: 346 SSHM---DPPTLVDLILEVVAANLCSSLEDVKTLIKHTLF-------------------- 382
S + D L+L + +C + + ++TL TL
Sbjct: 810 ESSLMEDDRVQFKSLLLSAIGLGICGTRDALQTLASSTLLSQQAERRQLELRTITDEVIV 869
Query: 383 --YQ-----------LKSPEDQQTFLETTLSEIVASLL---------------------- 407
YQ L++P + + T E A L
Sbjct: 870 QLYQGNAIKARHDSCLRNPPNMIVTISTAEEEEQAPRLTMFPFAHPEETPRTATFIRVHK 929
Query: 408 --ASKGTML-TMNEAGHLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHML 464
+ G ++ T+ + L + + KAA++ G + + Y ++ C+L+ +
Sbjct: 930 DPSQPGKLIKTIERSSQLEVNRLGKAAIRGGFDMEKAVRYYDEMQTLGKRLCVLDEYDLF 989
Query: 465 FLVIPLEYRIPSDG--ILLSRSKVYDRYTKFHPQTLRVAEALGVTENLVALNVTGK-LKD 521
+L++ LE DG + L ++ + + R+AE G+ L+ +T + + +
Sbjct: 990 YLIL-LE-----DGREVHLKVDELIVLINQLTSEQQRIAERYGIGNVLMTKILTRRAIPE 1043
Query: 522 EKKALLCRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELP 581
E+ + RF +++++ + Q+VA+ Y + LQ +N T+ A V R CEE+P
Sbjct: 1044 EQMHKMLRFVRVLVVHELWRQTSVQEVAQRYHVNAGSLQTLMNSTAGTAYSVLRMCEEVP 1103
Query: 582 ELWCYKQLLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIARADAKEM 641
ELW +K LLT + + L +C L LM+LP VK+GRA+QL AG+++L IARA +KE+
Sbjct: 1104 ELWAFKHLLTGIIERLTHCCKQELMPLMELPSVKLGRAKQLYRAGFTTLASIARAKSKEL 1163
Query: 642 VAKIRHLPLRSARNLISAAKLHFITKMD 669
V I H+ R+A LI +AK + ++D
Sbjct: 1164 VESIEHMNYRAANQLILSAKAKLMQEVD 1191
>gi|410213602|gb|JAA04020.1| helicase, POLQ-like [Pan troglodytes]
Length = 1101
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 248/705 (35%), Positives = 391/705 (55%), Gaps = 38/705 (5%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V EK L+ E F++EEYAG KG++PPTKR+ KKS+YI TIEKG L+ SLI+
Sbjct: 393 IVQEKISGLSSFGIELGFFVEEYAGSKGRFPPTKRR-EKKSLYIATIEKGHSLVNSLIET 451
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIE 120
RID +GL+V+DE HM+ E RG LE ++K+LY K+ QI MSAT+ N+ L F++
Sbjct: 452 GRIDSLGLVVVDELHMIGEGSRGATLEMTLAKILYTSKTTQIIGMSATLNNVEDLQKFLQ 511
Query: 121 GITYVENSRPTKHSEYVTVDKRVFQ----SFDGKSLTEIYADNLDYSLTGSGPDAVLHLV 176
Y RP + EY+ ++ +++ + +G + + + +L PD ++ LV
Sbjct: 512 AEYYTSQFRPVELKEYLKINDTIYEVDSKAENGMTFSRLLNYKYSDTLKKMDPDHLVALV 571
Query: 177 Q---GNLMVLIFCSSKIACSNLA-LRLQFDRFPGTKEY---KKQEKEDLIEALKEENDGK 229
N L+FC SK C N+A + +F +KEY K++EK ++I+ LK +G
Sbjct: 572 TEVIPNYSCLVFCPSKKNCENVAEMICKF----LSKEYLKHKEKEKCEVIKNLKNIGNGN 627
Query: 230 LSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIR 289
L L+ I +GVAYHH+ LT+ ER+L+EEAY G L + CTSTLAAGVNLPA+RVI+R
Sbjct: 628 LCPVLKRTIPFGVAYHHSGLTSDERKLLEEAYSTGVLCLFTCTSTLAAGVNLPARRVILR 687
Query: 290 DSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHM 349
YV ++F+ N YKQM+GRAGR G+ GESI++ + +D + ++ E SH+
Sbjct: 688 APYVAKEFLKRNQYKQMIGRAGRAGIDTIGESILILQE-KDKQQVLELITKPLENCYSHL 746
Query: 350 D---PPTLVDLILEVVAANLCSSLEDVKTLIKHTLF-YQLKSPEDQQTFLETT---LSEI 402
+ L L ++ + ++L+D+ + T F Q K +++ E T L +
Sbjct: 747 VQEFTKGIQTLFLSLIGLKIATNLDDIYHFMNGTFFGVQQKVLLKEKSLWEITVESLRYL 806
Query: 403 VASLLASKGTMLTMNEAG--HLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNS 460
L K T+ E + +T + +A+ + + C I+Y DL L +
Sbjct: 807 TEKGLLQKDTIYKSEEEVQYNFHITKLGRASFKGTIDLAYCDILYRDLKKGLEGLVLESL 866
Query: 461 LHMLFLVIP--LEYRIPSDGILLSRSKVYDRYTKFHPQTLRVAEALGVTENLVALNVTGK 518
LH+++L P L + D ++ R ++++ P VA LGV+E+ + +G+
Sbjct: 867 LHLIYLTTPYDLVSQCNPDWMIYFR-----QFSQLSPAEQNVAAILGVSESFIGKKASGQ 921
Query: 519 LKDEK--KALLCRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRF 576
+K K ++ R + + ILY +L N V++ + + ++QN L T+ F+S V F
Sbjct: 922 AIGKKVDKDVVNRLYLSFILYTLLKETNIWTVSEKFNMPRGYIQNLLTGTASFSSCVLHF 981
Query: 577 CEELPELWCYKQLLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIARA 636
CEEL E W Y+ LL +L + L YC L LM++ GV GRA+QL +AGY SL +A A
Sbjct: 982 CEELEEFWVYRALLVELTKKLTYCVKAELIPLMEVTGVLEGRAKQLYSAGYKSLMHLANA 1041
Query: 637 DAKEMVAKIRHLPLRSARNLISAAKLHFITKMDKVEAMKNLIQNL 681
+ + +V I HL R A+ ++S+AK+ +K EA++ ++ L
Sbjct: 1042 NPEVLVRTIDHLSRRQAKQIVSSAKMLL---HEKAEALQEEVEEL 1083
>gi|297466747|ref|XP_002704678.1| PREDICTED: LOW QUALITY PROTEIN: helicase, POLQ-like [Bos taurus]
Length = 1075
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 239/700 (34%), Positives = 385/700 (55%), Gaps = 28/700 (4%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V EK L+ E F++EEYAG KG++PP KR+ KKS+YI TIEKG L+ SLI+
Sbjct: 367 IVQEKISGLSSFGIELGFFVEEYAGSKGKFPPIKRR-EKKSLYIATIEKGHSLVNSLIET 425
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIE 120
RI +GL+V+DE HM+ E RG ILE ++K+LY K+ QI MSAT+ N+ L F++
Sbjct: 426 GRISSLGLVVVDELHMIGEGTRGAILEMTLAKILYTSKTTQIIGMSATLNNVEDLQKFLQ 485
Query: 121 GITYVENSRPTKHSEYVTVDKRVFQ----SFDGKSLTEIYADNLDYSLTGSGPDAVLHLV 176
Y RP + EY+ ++ +++ + +G + + + +L PD ++ LV
Sbjct: 486 AEYYTSQFRPVELKEYLKINDTIYEVNSRAENGMTFSRLLNYKYSDTLKKMDPDHLVALV 545
Query: 177 Q---GNLMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTN 233
+ L+FC +K C N+A + ++K++EK+++I+ LK + G L
Sbjct: 546 TEVIPSYSCLVFCPTKKNCENVAEMICKSLSKEYLKHKEKEKQEVIQNLKNVSGGNLCRV 605
Query: 234 LEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYV 293
L I +GVAYHH+ LT+ ER+L+EEAY G L + CTSTLAAGVNLPA+RVI+R YV
Sbjct: 606 LRHTIPFGVAYHHSGLTSDERKLLEEAYSTGVLCLFTCTSTLAAGVNLPARRVILRAPYV 665
Query: 294 GRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMD--- 350
++ + N YKQM+GRAGR G+ +GESI++ + +D + +++ E SH+
Sbjct: 666 AKEKLKRNQYKQMIGRAGRAGIDSAGESILILQE-KDKQQVLQLISKPLENCYSHLVQEF 724
Query: 351 PPTLVDLILEVVAANLCSSLEDVKTLIKHTLF-YQLKSPEDQQTFLETTLSE---IVASL 406
+ L L ++ + ++L+D+ + T F Q K +++ E T+ +
Sbjct: 725 TKGIQTLFLSLIGLKIATNLDDIYRFMSGTFFGVQQKVLLKEKSLWEITMESLRYLTEKG 784
Query: 407 LASKGTMLTMNE--AGHLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHML 464
L K TM E + +T + +A+ + + C I+Y DL L + LH++
Sbjct: 785 LLQKDTMCGSKEEFQNNFHITKLGRASFKGTIDLAYCDILYRDLKKGLEGLMLESLLHLI 844
Query: 465 FLVIPLEYRIPSDGILLSRSKVYDR-YTKFHPQTLRVAEALGVTENLVALNVTGKLKDEK 523
+L P + D + +Y R + + P VA +GV+EN + +G+ +K
Sbjct: 845 YLTTPYDMASQCDPDWM----IYFRQFNQLSPAEQNVAALVGVSENFIGKKASGQAIRKK 900
Query: 524 --KALLCRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELP 581
K ++ R + + ILY +L N V++ + + ++Q+ L+ + F+S V FCEEL
Sbjct: 901 VDKNIVNRLYLSFILYTLLKETNIWSVSEKFNMPRGYIQSLLSAAAAFSSCVLHFCEELE 960
Query: 582 ELWCYKQLLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIARADAKEM 641
E W Y+ LL +L + L YC L LM++ GV GRARQL NAGY SL +A A+ + +
Sbjct: 961 EFWVYRALLGELTKKLTYCVKAELIPLMEVTGVLEGRARQLYNAGYKSLTHLANANPEVL 1020
Query: 642 VAKIRHLPLRSARNLISAAKLHFITKMDKVEAMKNLIQNL 681
+ I HL R A+ ++S+AK+ +K EA++ ++ L
Sbjct: 1021 IRTIDHLSRRQAKQIVSSAKMLL---HEKAEALQEEVEEL 1057
>gi|19110782|gb|AAL85274.1|AF436845_1 DNA helicase HEL308 [Homo sapiens]
Length = 1101
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 247/705 (35%), Positives = 391/705 (55%), Gaps = 38/705 (5%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V EK L+ E F++EEYAG KG++PPTKR+ KKS+YI TIEKG L+ SLI+
Sbjct: 393 IVQEKISGLSSFGIELGFFVEEYAGSKGRFPPTKRR-EKKSLYIATIEKGHSLVNSLIET 451
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIE 120
RID +GL+V+DE HM+ E RG LE ++K+LY K+ QI MSAT+ N+ L F++
Sbjct: 452 GRIDSLGLVVVDELHMIGEGSRGATLEMTLAKILYTSKTTQIIGMSATLNNVEDLQKFLQ 511
Query: 121 GITYVENSRPTKHSEYVTVDKRVFQ----SFDGKSLTEIYADNLDYSLTGSGPDAVLHLV 176
Y RP + EY+ ++ +++ + +G + + + +L PD ++ LV
Sbjct: 512 AEYYTSQFRPVELKEYLKINDTIYEVDSKAENGMTFSRLLNYKYSDTLKKMDPDHLVALV 571
Query: 177 Q---GNLMVLIFCSSKIACSNLA-LRLQFDRFPGTKEY---KKQEKEDLIEALKEENDGK 229
N L+FC SK C N+A + +F +KEY K++EK ++I+ LK +G
Sbjct: 572 TEVIPNYSCLVFCPSKKNCENVAEMICKF----LSKEYLKHKEKEKCEVIKNLKNIGNGN 627
Query: 230 LSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIR 289
L L+ I +GVAYHH+ LT+ ER+L+EEAY G L + CTSTLAAGVNLPA+RVI+R
Sbjct: 628 LCPVLKRTIPFGVAYHHSGLTSDERKLLEEAYSTGVLCLFTCTSTLAAGVNLPARRVILR 687
Query: 290 DSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHM 349
YV ++F+ N YKQM+GRAGR G+ GESI++ + +D + ++ E SH+
Sbjct: 688 APYVAKEFLKRNQYKQMIGRAGRAGIDTIGESILILQE-KDKQQVLELITKPLENCYSHL 746
Query: 350 D---PPTLVDLILEVVAANLCSSLEDVKTLIKHTLF-YQLKSPEDQQTFLETT---LSEI 402
+ L L ++ + ++L+D+ + T F Q K +++ E T L +
Sbjct: 747 VQEFTKGIQTLFLSLIGLKIATNLDDIYHFMNGTFFGVQQKVLLKEKSLWEITVESLRYL 806
Query: 403 VASLLASKGTMLTMNEAG--HLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNS 460
L K T+ E + +T + +A+ + + C I+Y DL L +
Sbjct: 807 TEKGLLQKDTIYKSEEEVQYNFHITKLGRASFKGTIDLAYCDILYRDLKKGLEGLVLESL 866
Query: 461 LHMLFLVIP--LEYRIPSDGILLSRSKVYDRYTKFHPQTLRVAEALGVTENLVALNVTGK 518
LH+++L P L + D ++ R ++++ P VA LGV+E+ + +G+
Sbjct: 867 LHLIYLTTPYDLVSQCNPDWMIYFR-----QFSQLSPAEQNVAAILGVSESFIGKKASGQ 921
Query: 519 LKDEK--KALLCRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRF 576
+K K ++ R + + +LY +L N V++ + + ++QN L T+ F+S V F
Sbjct: 922 AIGKKVDKNVVNRLYLSFVLYTLLKETNIWTVSEKFNMPRGYIQNLLTGTASFSSCVLHF 981
Query: 577 CEELPELWCYKQLLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIARA 636
CEEL E W Y+ LL +L + L YC L LM++ GV GRA+QL +AGY SL +A A
Sbjct: 982 CEELEEFWVYRALLVELTKKLTYCVKAELIPLMEVTGVLEGRAKQLYSAGYKSLMHLANA 1041
Query: 637 DAKEMVAKIRHLPLRSARNLISAAKLHFITKMDKVEAMKNLIQNL 681
+ + +V I HL R A+ ++S+AK+ +K EA++ ++ L
Sbjct: 1042 NPEVLVRTIDHLSRRQAKQIVSSAKMLL---HEKAEALQEEVEEL 1083
>gi|110556640|ref|NP_598375.2| helicase POLQ-like [Homo sapiens]
gi|119626339|gb|EAX05934.1| DNA helicase HEL308, isoform CRA_a [Homo sapiens]
gi|146327581|gb|AAI41525.1| Helicase, POLQ-like [synthetic construct]
Length = 1101
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 247/705 (35%), Positives = 391/705 (55%), Gaps = 38/705 (5%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V EK L+ E F++EEYAG KG++PPTKR+ KKS+YI TIEKG L+ SLI+
Sbjct: 393 IVQEKISGLSSFGIELGFFVEEYAGSKGRFPPTKRR-EKKSLYIATIEKGHSLVNSLIET 451
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIE 120
RID +GL+V+DE HM+ E RG LE ++K+LY K+ QI MSAT+ N+ L F++
Sbjct: 452 GRIDSLGLVVVDELHMIGEGSRGATLEMTLAKILYTSKTTQIIGMSATLNNVEDLQKFLQ 511
Query: 121 GITYVENSRPTKHSEYVTVDKRVFQ----SFDGKSLTEIYADNLDYSLTGSGPDAVLHLV 176
Y RP + EY+ ++ +++ + +G + + + +L PD ++ LV
Sbjct: 512 AEYYTSQFRPVELKEYLKINDTIYEVDSKAENGMTFSRLLNYKYSDTLKKMDPDHLVALV 571
Query: 177 Q---GNLMVLIFCSSKIACSNLA-LRLQFDRFPGTKEY---KKQEKEDLIEALKEENDGK 229
N L+FC SK C N+A + +F +KEY K++EK ++I+ LK +G
Sbjct: 572 TEVIPNYSCLVFCPSKKNCENVAEMICKF----LSKEYLKHKEKEKCEVIKNLKNIGNGN 627
Query: 230 LSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIR 289
L L+ I +GVAYHH+ LT+ ER+L+EEAY G L + CTSTLAAGVNLPA+RVI+R
Sbjct: 628 LCPVLKRTIPFGVAYHHSGLTSDERKLLEEAYSTGVLCLFTCTSTLAAGVNLPARRVILR 687
Query: 290 DSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHM 349
YV ++F+ N YKQM+GRAGR G+ GESI++ + +D + ++ E SH+
Sbjct: 688 APYVAKEFLKRNQYKQMIGRAGRAGIDTIGESILILQE-KDKQQVLELITKPLENCYSHL 746
Query: 350 D---PPTLVDLILEVVAANLCSSLEDVKTLIKHTLF-YQLKSPEDQQTFLETT---LSEI 402
+ L L ++ + ++L+D+ + T F Q K +++ E T L +
Sbjct: 747 VQEFTKGIQTLFLSLIGLKIATNLDDIYHFMNGTFFGVQQKVLLKEKSLWEITVESLRYL 806
Query: 403 VASLLASKGTMLTMNEAG--HLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNS 460
L K T+ E + +T + +A+ + + C I+Y DL L +
Sbjct: 807 TEKGLLQKDTIYKSEEEVQYNFHITKLGRASFKGTIDLAYCDILYRDLKKGLEGLVLESL 866
Query: 461 LHMLFLVIP--LEYRIPSDGILLSRSKVYDRYTKFHPQTLRVAEALGVTENLVALNVTGK 518
LH+++L P L + D ++ R ++++ P VA LGV+E+ + +G+
Sbjct: 867 LHLIYLTTPYDLVSQCNPDWMIYFR-----QFSQLSPAEQNVAAILGVSESFIGKKASGQ 921
Query: 519 LKDEK--KALLCRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRF 576
+K K ++ R + + +LY +L N V++ + + ++QN L T+ F+S V F
Sbjct: 922 AIGKKVDKNVVNRLYLSFVLYTLLKETNIWTVSEKFNMPRGYIQNLLTGTASFSSCVLHF 981
Query: 577 CEELPELWCYKQLLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIARA 636
CEEL E W Y+ LL +L + L YC L LM++ GV GRA+QL +AGY SL +A A
Sbjct: 982 CEELEEFWVYRALLVELTKKLTYCVKAELIPLMEVTGVLEGRAKQLYSAGYKSLMHLANA 1041
Query: 637 DAKEMVAKIRHLPLRSARNLISAAKLHFITKMDKVEAMKNLIQNL 681
+ + +V I HL R A+ ++S+AK+ +K EA++ ++ L
Sbjct: 1042 NPEVLVRTIDHLSRRQAKQIVSSAKMLL---HEKAEALQEEVEEL 1083
>gi|296434521|sp|Q8TDG4.2|HELQ_HUMAN RecName: Full=Helicase POLQ-like; AltName: Full=Mus308-like helicase;
AltName: Full=POLQ-like helicase
Length = 1101
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 247/705 (35%), Positives = 391/705 (55%), Gaps = 38/705 (5%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V EK L+ E F++EEYAG KG++PPTKR+ KKS+YI TIEKG L+ SLI+
Sbjct: 393 IVQEKISGLSSFGIELGFFVEEYAGSKGRFPPTKRR-EKKSLYIATIEKGHSLVNSLIET 451
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIE 120
RID +GL+V+DE HM+ E RG LE ++K+LY K+ QI MSAT+ N+ L F++
Sbjct: 452 GRIDSLGLVVVDELHMIGEGSRGATLEMTLAKILYTSKTTQIIGMSATLNNVEDLQKFLQ 511
Query: 121 GITYVENSRPTKHSEYVTVDKRVFQ----SFDGKSLTEIYADNLDYSLTGSGPDAVLHLV 176
Y RP + EY+ ++ +++ + +G + + + +L PD ++ LV
Sbjct: 512 AEYYTSQFRPVELKEYLKINDTIYEVDSKAENGMTFSRLLNYKYSDTLKKMDPDHLVALV 571
Query: 177 Q---GNLMVLIFCSSKIACSNLA-LRLQFDRFPGTKEY---KKQEKEDLIEALKEENDGK 229
N L+FC SK C N+A + +F +KEY K++EK ++I+ LK +G
Sbjct: 572 TEVIPNYSCLVFCPSKKNCENVAEMICKF----LSKEYLKHKEKEKCEVIKNLKNIGNGN 627
Query: 230 LSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIR 289
L L+ I +GVAYHH+ LT+ ER+L+EEAY G L + CTSTLAAGVNLPA+RVI+R
Sbjct: 628 LCPVLKRTIPFGVAYHHSGLTSDERKLLEEAYSTGVLCLFTCTSTLAAGVNLPARRVILR 687
Query: 290 DSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHM 349
YV ++F+ N YKQM+GRAGR G+ GESI++ + +D + ++ E SH+
Sbjct: 688 APYVAKEFLKRNQYKQMIGRAGRAGIDTIGESILILQE-KDKQQVLELITKPLENCYSHL 746
Query: 350 D---PPTLVDLILEVVAANLCSSLEDVKTLIKHTLF-YQLKSPEDQQTFLETT---LSEI 402
+ L L ++ + ++L+D+ + T F Q K +++ E T L +
Sbjct: 747 VQEFTKGIQTLFLSLIGLKIATNLDDIYHFMNGTFFGVQQKVLLKEKSLWEITVESLRYL 806
Query: 403 VASLLASKGTMLTMNEAG--HLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNS 460
L K T+ E + +T + +A+ + + C I+Y DL L +
Sbjct: 807 TEKGLLQKDTIYKSEEEVQYNFHITKLGRASFKGTIDLAYCDILYRDLKKGLEGLVLESL 866
Query: 461 LHMLFLVIP--LEYRIPSDGILLSRSKVYDRYTKFHPQTLRVAEALGVTENLVALNVTGK 518
LH+++L P L + D ++ R ++++ P VA LGV+E+ + +G+
Sbjct: 867 LHLIYLTTPYDLVSQCNPDWMIYFR-----QFSQLSPAEQNVAAILGVSESFIGKKASGQ 921
Query: 519 LKDEK--KALLCRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRF 576
+K K ++ R + + +LY +L N V++ + + ++QN L T+ F+S V F
Sbjct: 922 AIGKKVDKNVVNRLYLSFVLYTLLKETNIWTVSEKFNMPRGYIQNLLTGTASFSSCVLHF 981
Query: 577 CEELPELWCYKQLLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIARA 636
CEEL E W Y+ LL +L + L YC L LM++ GV GRA+QL +AGY SL +A A
Sbjct: 982 CEELEEFWVYRALLVELTKKLTYCVKAELIPLMEVTGVLEGRAKQLYSAGYKSLMHLANA 1041
Query: 637 DAKEMVAKIRHLPLRSARNLISAAKLHFITKMDKVEAMKNLIQNL 681
+ + +V I HL R A+ ++S+AK+ +K EA++ ++ L
Sbjct: 1042 NPEVLVRTIDHLSRRQAKQIVSSAKMLL---HEKAEALQEEVEEL 1083
>gi|193659627|ref|XP_001943294.1| PREDICTED: helicase POLQ-like isoform 1 [Acyrthosiphon pisum]
gi|328698000|ref|XP_003240510.1| PREDICTED: helicase POLQ-like isoform 2 [Acyrthosiphon pisum]
Length = 825
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 255/689 (37%), Positives = 387/689 (56%), Gaps = 38/689 (5%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V EK QSL +F +EEY G KG++PP R+ K SIYICT+E+G+ L+ ++ +
Sbjct: 114 LVQEKVQSLCPFGLNLEFNVEEYVGGKGKHPPLHRK-RKSSIYICTLERGAGLVDCMLAD 172
Query: 61 NRI---DEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKS---IQIFAMSATIGNINA 114
N +G+IV+DE H+L E +RG +LE ++KVL K+S IQI MSATIGN+
Sbjct: 173 NGQLGGRSVGMIVVDELHLLGEQKRGALLEATLTKVLDSKQSKHNIQIIGMSATIGNMQE 232
Query: 115 LSTFIEGITYVENSRPTKHSEYVTVDKRVF---QSFDGKSLTEIYADNLDYS-------- 163
+ F+ Y + RP K +E + +++++F + DG SL LD+
Sbjct: 233 IGDFLNAHVYTRDFRPVKLTETIKLNEQIFVINKDIDG-SLKSKLDRKLDFDAYSTDMKL 291
Query: 164 LTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALK 223
L SG ++ + + LIFC +K +C ++A + + K ++KE+L +ALK
Sbjct: 292 LDPSGIGLLVREILPDGSCLIFCPTKSSCQSIAKIIYKTIGREETKVKLKQKEELYKALK 351
Query: 224 EENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPA 283
EE DGK+ L IL+GVAYH++ LT ER+LIEEA+L G L+ ICCTSTLAAGVNLPA
Sbjct: 352 EEGDGKVCPLLSRSILFGVAYHNSGLTNAERKLIEEAFLDGILKCICCTSTLAAGVNLPA 411
Query: 284 QRVIIRDSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPE 343
QRVII YVGRDF+ + Y+QMVGRAGR GL ESG+S++L + D + ++ +G E
Sbjct: 412 QRVIITSPYVGRDFMKQSTYRQMVGRAGRAGLTESGDSVLLFQE-NDKEKIKVLLESGVE 470
Query: 344 PISSHM--DPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQLKSPEDQQTFLETTLSE 401
+ S + + + +IL V+ SS + + L+K TLF Q + + T S+
Sbjct: 471 HVDSCLGTEESVVYSMILSSVSTGCTSSQQQLVDLMKRTLFIQQAEKRNVEC---TVASD 527
Query: 402 IVASLLASKGTMLTMNEA--GHLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLN 459
+V S L ++ ++ L LTSIAKAAV A L +Y++LL L N
Sbjct: 528 LVESCLDKLKSINAFDKPIEDKLKLTSIAKAAVAANLDILEAQKLYTELLEASSALILTN 587
Query: 460 SLHMLFLVIPLEYRIPSDGILLSRSKVYDRYTKFHPQTLRVAEALGVTENLVALNVT-GK 518
LH+L+L +P ++ I L R V D T +A LG+ E ++ + GK
Sbjct: 588 KLHLLYLAVPY-----TECIALERQNVLDIMTNLQGDQQALANRLGLNELCISQFFSYGK 642
Query: 519 LKDEKKALLCRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCE 578
+K+ + + +F + IL D+ N ++ V+K Y + + +FL+ T+ AS + RF E
Sbjct: 643 VKNVSENIWNKFLMSLILNDLWNKESIWTVSKTYNLPRGTIHSFLSRTASHASSILRFTE 702
Query: 579 ELPE--LWCYKQLLTDLPQTL---MYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELI 633
L + L + L ++ L + + +L +LM LP V+ GRA QL AGY +L +
Sbjct: 703 ALKDKKLDHFPMLFQNIIPKLNIGILGSSSDLESLMSLPSVRFGRATQLYKAGYKTLNDV 762
Query: 634 ARADAKEMVAKIRHLPLRSARNLISAAKL 662
A+A+ KE+ I HLPL+ +R +I++AKL
Sbjct: 763 AKANKKELCNVINHLPLKVSREMIASAKL 791
>gi|195325899|ref|XP_002029668.1| GM25023 [Drosophila sechellia]
gi|194118611|gb|EDW40654.1| GM25023 [Drosophila sechellia]
Length = 1050
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 256/734 (34%), Positives = 393/734 (53%), Gaps = 53/734 (7%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V EK +++ A + F +EEY KG+ PP R+ ++S++I +IEKG+ L+ SLI
Sbjct: 320 IVQEKVSAMSPFAIDLDFIVEEYTAGKGKCPPQPRR-KRRSLFIASIEKGAVLMDSLIDV 378
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIE 120
R EIGL+V+DE H++ E RG LE ++KV++L +IQI MSATIGN++ +S+F+
Sbjct: 379 QRPHEIGLVVVDELHLIGEKGRGATLEAFLTKVMFLNANIQIVGMSATIGNLSEISSFLN 438
Query: 121 GITYVENSRPTKHSEYVTVDKRVFQ-SFDGKSLTEIYAD------NLDYSLTGSGPDAVL 173
Y RP + EY+ + + + G++L EI+ N ++ + PD +
Sbjct: 439 ADVYTRGFRPVELKEYIKCGPDLLEINSAGQTLEEIFVPSRSVEYNYSEAVKRADPDHLA 498
Query: 174 HLVQ---GNLMVLIFCSSKIACSNLALRLQFDRFPGTK--EYKKQEKEDLIEALKEENDG 228
L+ L+FC S+ C N+AL L P K E+++ EK DL++AL ++ G
Sbjct: 499 GLISECAPEHCCLVFCPSRKNCENVALLLS-RIVPKHKFFEHRRSEKLDLMDAL-DKMCG 556
Query: 229 KLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVII 288
LS L + + YG+AYHH+ LT ER+ IE AY G + +ICCTSTLAAGVNLPA+RVII
Sbjct: 557 ILSPVLAKTLPYGIAYHHSGLTTDERKYIETAYRFGVVTVICCTSTLAAGVNLPAKRVII 616
Query: 289 RDSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISS- 347
R YVG++F++L YKQMVGRAGR GL E+GESI++ ++ + L + + + +SS
Sbjct: 617 RAPYVGQEFLTLCKYKQMVGRAGRAGLGEAGESILIAQSKDNLLVGQMLFSPMDKALSSL 676
Query: 348 -HMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLF-YQLKSPE---------------- 389
+ L LIL VV NL D+ L+ TL Q KS E
Sbjct: 677 DQNEAVGLQSLILSVVGLNLAECRRDLNRLVNSTLLSVQAKSLEVAVDEIVLRILREMFK 736
Query: 390 -------DQQTFLETTLSEIVASLLASKGTM------LTMNEAGHLSLTSIAKAAVQAGL 436
+ Q + S+I+ S AS+ L + ++ LT+I +AA +AG+
Sbjct: 737 NKVLQLAEPQAKSKINSSDIITSQDASQANRPAGDRRLLIGQSTTFKLTNIGRAAFKAGI 796
Query: 437 SHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEYRIPSDGILLSRSKV-YDRYTKFHP 495
+ I+ +L + L N LH+L+LV+ D + + + + + YT
Sbjct: 797 DYKRANAIHKELKQAQQQLILTNYLHLLYLVVCFNSNERGDELFPADASILFGVYTSLPL 856
Query: 496 QTLRVAEALGVTENLVA-LNVTGKLKDEKKALLCRFFHACILYDVLNFDNHQKVAKMYGI 554
+ + + LG TE A L T ++ L R + IL D+LN VA Y +
Sbjct: 857 DSQAMFKQLGFTEAHAARLFKTQSVQGPLSLQLNRMYKVLILADILNLLPIPSVASKYNV 916
Query: 555 QNSHLQNFLNVTSYFASKVYRFCEELPELWCYKQLLTDLPQTLMYCRAPNLRALMDLPGV 614
+ LQ+ ++ ++ AS + R CEEL E WCYK L + + C L LM+LP V
Sbjct: 917 ERGTLQHLISQSTAAASAIVRLCEELEEFWCYKPLFERILHKMDRCGTFELEPLMELPAV 976
Query: 615 KIGRARQLLNAGYSSLELIARADAKEMVAKIRHLPLRSARNLISAAKLHFITKMD----K 670
KI RARQL AG+ ++ IAR ++V + H+PLR A ++SAAK+ + K+D +
Sbjct: 977 KINRARQLYAAGFQTIGDIARVRPSQLVQSLEHMPLRVATEIVSAAKIILMKKLDHLEEE 1036
Query: 671 VEAMKNLIQNLQKN 684
E +K+ +++ KN
Sbjct: 1037 TENLKDCLKSSDKN 1050
>gi|126331098|ref|XP_001371040.1| PREDICTED: helicase, POLQ-like [Monodelphis domestica]
Length = 1061
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 243/707 (34%), Positives = 391/707 (55%), Gaps = 42/707 (5%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V EK SL+ E F +EEYAG KG++PP KR+ KKS+YI TIEKG L+ SLI++
Sbjct: 349 IVQEKISSLSSFGLELGFLVEEYAGSKGRFPPIKRR-GKKSLYIATIEKGHGLVNSLIED 407
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIE 120
RI+E+GL+VIDE HM+ E RG +LE ++K+LY+ K+ QI MSAT+ N+ L F++
Sbjct: 408 GRINELGLVVIDELHMIGEGSRGAVLEITLAKILYMSKTTQIIGMSATLNNVEELQEFLK 467
Query: 121 GITYVENSRPTKHSEYVTVDKRVFQ----SFDGKSLTEI----YADNLDYSLTGSGPDAV 172
Y RP + EY+ ++ +F+ S G + + + Y+DNL PD +
Sbjct: 468 AEYYTSKFRPVELKEYLKINDTIFEVDIKSEKGYTFSRLLNCKYSDNLK----KMDPDHL 523
Query: 173 LHLVQ---GNLMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKE--DLIEALKEEND 227
+ LV + L+FC +K C N+A + +F K +EKE D ++ LK ++
Sbjct: 524 VALVTEVIPSYSCLVFCPTKKNCENVADMIC--KFLNKDYLKHREKEKCDFLKNLKNISN 581
Query: 228 GKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVI 287
G L L+ + +GVAYHH+ LT ER+++EEAY G L ++ CTSTLAAGVNLPA+RVI
Sbjct: 582 GSLCPVLKRTVPFGVAYHHSGLTNDERKILEEAYATGVLCLLTCTSTLAAGVNLPARRVI 641
Query: 288 IRDSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISS 347
+R Y+ F+ N Y+QM+GRAGR G+ GESI++ + L ++N+ E S
Sbjct: 642 LRAPYIATQFLKRNQYQQMIGRAGRAGMDTVGESILILQEKDKHLVL-DLVNSPLENCYS 700
Query: 348 HMDPPT---LVDLILEVVAANLCSSLEDVKTLIKHTLF-YQLKSPEDQQTFLETT---LS 400
H+ + L+L ++ + +LED+ + T F Q KS +++ E + L
Sbjct: 701 HLGQEVTKGIESLLLSLIGLKIAKNLEDIYHFMCGTFFGIQQKSLSKEKSLWEISRKALE 760
Query: 401 EIVASLLASKGTMLTMNEAGH--LSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLL 458
++ L K + E + +T + +A+++ L C I+Y DL L
Sbjct: 761 NLIEKGLLQKKNISKNAEESQCDIHITKLGQASLKGTLDLAYCGILYKDLKKGLEGLVLE 820
Query: 459 NSLHMLFLVIPLEY--RIPSDGILLSRSKVYDRYTKFHPQTLRVAEALGVTENLVALNVT 516
+ LH+++L P + + D +L R + +VA +GV+E+ + +
Sbjct: 821 SYLHLIYLTTPYDMVSQCRPDWMLYLR-----QLNHLSSAEQKVAAIVGVSESFIIKKAS 875
Query: 517 GKL--KDEKKALLCRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVY 574
G+ KD K ++ RF+ + +LY +L N V++ + + ++QN L + F+S +
Sbjct: 876 GQAIKKDVDKDVVNRFYLSFVLYALLKETNVWSVSEKFNMSRGYVQNLLTGAASFSSCIL 935
Query: 575 RFCEELPELWCYKQLLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIA 634
FCEEL E W Y+ LLT+L + L YC +L LM++ G+ RA+QL NAGY ++ +A
Sbjct: 936 HFCEELEEFWVYRALLTELTKKLSYCVRADLVPLMEVTGILQSRAKQLYNAGYKTVAHLA 995
Query: 635 RADAKEMVAKIRHLPLRSARNLISAAKLHFITKMDKVEAMKNLIQNL 681
AD + ++ I HL R A+ ++S+AK+ +K EA++ +++L
Sbjct: 996 NADPEVLIRTINHLSRRQAKQIVSSAKMLI---NEKAEALQEEMEDL 1039
>gi|348567326|ref|XP_003469451.1| PREDICTED: helicase POLQ-like [Cavia porcellus]
Length = 1138
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 253/707 (35%), Positives = 389/707 (55%), Gaps = 42/707 (5%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V EK L+ E F++EEYAG KG++PP KR+ KKS+Y+ TIEK L+ SLI+
Sbjct: 343 LVQEKISGLSSFGIELGFFVEEYAGSKGRFPPVKRR-EKKSLYVATIEKAHGLVNSLIET 401
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIE 120
RI +GL+V+DE HM+ E RG ILE ++KVLY K+ QI MSAT+ N+ L TF++
Sbjct: 402 GRIGSLGLVVVDELHMIGEGSRGAILEMTLAKVLYTSKTTQIIGMSATLNNVQDLQTFLQ 461
Query: 121 GITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNL-----DYSLTGSGPDAVLHL 175
Y RP + EY+ ++ +++ D K+ + I L SL PD ++ L
Sbjct: 462 AEYYSSQFRPVELKEYLKINDTIYE-VDRKAESSITVSRLLPHQYSDSLKKMDPDHLVAL 520
Query: 176 VQ---GNLMVLIFCSSKIACSNLALRL-QFDRFPGTKEY---KKQEKEDLIEALKEENDG 228
V N LIFC SK C N+A L +F KEY ++QEK +L++ L++ + G
Sbjct: 521 VTEVIPNYSCLIFCPSKKNCENVAEMLCKFL----NKEYLKHREQEKCELLKNLRDSSGG 576
Query: 229 KLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVII 288
L L+ + +G AYHH+ LT ER+L+E AY AG L ++ CTSTLAAGVNLPA+RVI+
Sbjct: 577 HLCPVLKRTVPFGAAYHHSGLTGEERKLLEGAYSAGVLCLLACTSTLAAGVNLPARRVIL 636
Query: 289 RDSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSH 348
R YV ++F+ + YKQM+GRAGR G+ GESI++ + +D + +++ PE SH
Sbjct: 637 RAPYVAKEFLKKSQYKQMIGRAGRAGIDTVGESILILQE-KDKQKVLELISRPPENCYSH 695
Query: 349 MD---PPTLVDLILEVVAANLCSSLEDVKTLIKHTLF-YQLKSPEDQQTFLETTLSEIVA 404
+ + L L ++ + ++L D+ + TLF Q K +++ E T+ +
Sbjct: 696 LVQQFTKGIQALFLSLIGLKIATNLGDIYNFMNGTLFGVQQKILLKEKSLWEVTVESL-- 753
Query: 405 SLLASKGTMLT--MNEAG-----HLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCL 457
L KG + ++E+G + +T + +A+ + + C +Y DL L
Sbjct: 754 RYLTEKGLLQKKHVSESGEELQCNFHITKLGQASFKGTIDLAYCDTLYRDLKKGLEGLVL 813
Query: 458 LNSLHMLFLVIPLEYRIPSDGILLSRSKVYDRY-TKFHPQTLRVAEALGVTENLVALNVT 516
N LH+++L P + D + +Y R + P RVA LGV+E+ VA
Sbjct: 814 ENLLHLIYLTTPYDLVSQCDPNWM----IYFRQIGQLSPAEQRVATLLGVSESYVAKKAA 869
Query: 517 GKLKDEK--KALLCRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVY 574
G+ +K K ++ R + + ILY +L N V++ + I +QN L + F+S V
Sbjct: 870 GQATRKKVDKDVVNRLYLSFILYALLKETNVWGVSEKFNIPRGSVQNLLMSAASFSSCVL 929
Query: 575 RFCEELPELWCYKQLLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIA 634
FCEEL E W Y+ LL +L + L YC L LM++ GV GRA+QL +AGY SL +A
Sbjct: 930 HFCEELEEFWVYRALLVELTKKLTYCVKAELIPLMEVTGVLEGRAKQLYSAGYRSLTHLA 989
Query: 635 RADAKEMVAKIRHLPLRSARNLISAAKLHFITKMDKVEAMKNLIQNL 681
AD + ++ I H R A+ ++S+AK+ +K EA++ ++ L
Sbjct: 990 NADPEVLIRTIDHCSRRQAKQIVSSAKMLL---QEKAEALQEEVEEL 1033
>gi|149046781|gb|EDL99555.1| rCG37823, isoform CRA_d [Rattus norvegicus]
Length = 714
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 239/676 (35%), Positives = 373/676 (55%), Gaps = 30/676 (4%)
Query: 8 SLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIG 67
SL+ E F++EEYAG KG++PP KR+ KKS+YI TIEKG L+ +LI+ R+ +G
Sbjct: 4 SLSSFGIELGFFVEEYAGSKGRFPPIKRR-EKKSLYIATIEKGHSLVNALIETGRMGTLG 62
Query: 68 LIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVEN 127
L+V+DE HM+ E RG LE ++KVLY K+ QI MSAT+ N+ L F++ Y
Sbjct: 63 LVVVDELHMIGEGSRGATLEMTLAKVLYTSKTTQIIGMSATLNNVEDLQAFLKAEYYTSQ 122
Query: 128 SRPTKHSEYVTVDKRVFQ----SFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQ---GNL 180
RP + E++ V+ +++ + DG + + + +L PD ++ LV N
Sbjct: 123 FRPVELKEFLKVNDTIYEVDSRAVDGMTFSRLLNYKYSDALKKVDPDRLVALVTEVIPNY 182
Query: 181 MVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILY 240
L+FC SK C N+A L ++++EK +LI++L+ GK+ L+ I +
Sbjct: 183 SCLVFCPSKKNCENVAEMLCKFLSRDYLNHREEEKGELIKSLRNVGHGKVCPVLKRTIPF 242
Query: 241 GVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGRDFISL 300
GVAYHH+ LT+ ER+L+EEAY G L + CTSTLAAGVNLPA+RVI+R YV F+
Sbjct: 243 GVAYHHSGLTSDERKLLEEAYSTGVLCLFTCTSTLAAGVNLPARRVILRAPYVANTFLKR 302
Query: 301 NMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMD---PPTLVDL 357
N YKQM+GRAGR G+ +GESI+L + +D + ++N E SH+ + L
Sbjct: 303 NQYKQMIGRAGRAGIDTAGESILLLQE-KDKQQVLGLINGPLEDCHSHLVEEFTKGIQSL 361
Query: 358 ILEVVAANLCSSLEDVKTLIKHTLF-YQLKSPEDQQTFLETTLSEIVASLLASKGTMLTM 416
L ++ + SL D+ + TLF Q K+ +++ E T+ + L KG +L
Sbjct: 362 FLSLIGLKIAESLGDIYQFMNGTLFGVQQKTLLREKSLWEVTVGAL--EHLTEKG-LLQK 418
Query: 417 NEAG-------HLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIP 469
+ G H +T + +A+ + + C +Y DL L + LH+++L P
Sbjct: 419 DSHGSPEESRCHFRITKLGQASFKGAIDLTYCDTLYRDLKKGLEGLVLESLLHLVYLTTP 478
Query: 470 LEYRIPSDGILLSRSKVYDR-YTKFHPQTLRVAEALGVTENLVALNVTGKLKDEK--KAL 526
+ S+ + VY R +++ P VA LG++E+ + +G+ +K K
Sbjct: 479 YDLAAQSEPDWM----VYFRQFSQLSPAEQSVATLLGISESFIGRKASGQAIRKKVDKNA 534
Query: 527 LCRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELWCY 586
+ R + + +LY +L N V++ + + ++QN L + F+S V FCEEL E W Y
Sbjct: 535 VNRLYLSFVLYSLLKETNVWSVSERFNMPRGYIQNLLMGAASFSSCVLHFCEELEEFWVY 594
Query: 587 KQLLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIARADAKEMVAKIR 646
K LLT+L + L YC L LM++ GV GRA+QL +AGY S+ +A A+ + +V I
Sbjct: 595 KALLTELTKKLTYCVKAELIPLMEVTGVLEGRAKQLYSAGYRSVVHLANANPEVLVKTID 654
Query: 647 HLPLRSARNLISAAKL 662
HL R A+ ++S+AK+
Sbjct: 655 HLSRRQAKQIVSSAKM 670
>gi|410957307|ref|XP_003985271.1| PREDICTED: LOW QUALITY PROTEIN: helicase POLQ-like [Felis catus]
Length = 1104
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 244/704 (34%), Positives = 389/704 (55%), Gaps = 36/704 (5%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V EK L+ E F++EEYAG KG++PP KR+ KKS+YI TIEKG L+ SLI+
Sbjct: 397 IVQEKISGLSSFGIELGFFVEEYAGSKGKFPPIKRR-EKKSLYIATIEKGHSLVNSLIET 455
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIE 120
RI +GL+V+DE HM+ E RG ILE ++KVLY K+ QI MSAT+ N+ L F++
Sbjct: 456 GRIGSLGLVVVDELHMIGEGSRGAILEMTLAKVLYTSKTTQIIGMSATLNNVEDLQEFLQ 515
Query: 121 GITYVENSRPTKHSEYVTVDKRVFQ----SFDGKSLTEIYADNLDYSLTGSGPDAVLHLV 176
Y RP + EY+ ++ +++ + +G + + + +L PD ++ LV
Sbjct: 516 AEYYTSQFRPVELKEYLKINDAIYEVDSKAENGMTFSRLLNYKYSDTLKKMDPDHLVALV 575
Query: 177 Q---GNLMVLIFCSSKIACSNLA-LRLQFDRFPGTKEY---KKQEKEDLIEALKEENDGK 229
+ L+FC +K C N+A + +F +KEY +++EK ++I+ LK + G
Sbjct: 576 TEVIPSYSCLVFCPTKKNCENVAEMICKF----LSKEYLKHREEEKHEVIKNLKNVSSGN 631
Query: 230 LSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIR 289
L L+ I +GVAYHH+ LT+ ER+L+EEAY G L + CTSTLAAGVNLPA+RVI+R
Sbjct: 632 LCPVLKRTIPFGVAYHHSGLTSDERKLLEEAYSTGVLCLFTCTSTLAAGVNLPARRVILR 691
Query: 290 DSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHM 349
YV ++F+ N YKQM+GRAGR G+ GESI++ + +D + +++ E SH+
Sbjct: 692 APYVAKEFLKRNQYKQMIGRAGRAGIDSFGESILILQE-KDKQQVLELISRPLENCYSHL 750
Query: 350 D---PPTLVDLILEVVAANLCSSLEDVKTLIKHTLF-YQLKSPEDQQTFLETTLSEIV-- 403
+ L L ++ + ++L+DV + T F Q K +++ E T+ +
Sbjct: 751 VQEFTKGIQTLFLSLIGLKIATNLDDVYHFMNGTFFGVQQKILLKEKSLWEITVESLRYL 810
Query: 404 --ASLLASKGTMLTMNEAGH-LSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNS 460
LL T + E H +T + +A+ + + C ++Y DL L +
Sbjct: 811 TEKGLLQKDTTDKSEEEFQHSFHITKLGRASFKGTIDLAYCDVLYRDLKKGLEGLVLESL 870
Query: 461 LHMLFLVIPLEYRIPSDGILLSRSKVYDR-YTKFHPQTLRVAEALGVTENLVALNVTGKL 519
LH+++L P + D + +Y R +++ P VA LGV+EN + +G+
Sbjct: 871 LHLIYLTTPYDMASQCDPDWM----IYFRQFSQLSPAEQNVAALLGVSENFIGKKASGQA 926
Query: 520 KDEK--KALLCRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFC 577
+K K ++ R + + +LY +L N V++ + + ++Q+ L + F+S V FC
Sbjct: 927 IKKKVDKDIVNRLYLSFVLYALLKETNIWSVSEKFNMPRGYIQSLLTGAATFSSCVLHFC 986
Query: 578 EELPELWCYKQLLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIARAD 637
EEL E W YK LL +L + L YC L LM++ GV GRA+QL NAGY SL +A A+
Sbjct: 987 EELEEFWVYKALLVELTKKLTYCVKAELIPLMEVTGVLEGRAKQLYNAGYKSLTHLANAN 1046
Query: 638 AKEMVAKIRHLPLRSARNLISAAKLHFITKMDKVEAMKNLIQNL 681
+ ++ I HL R A+ ++S+AK+ +K EA++ ++ L
Sbjct: 1047 PEVLIRTIDHLSRRQAKQIVSSAKMLL---HEKAEALQEEVEEL 1087
>gi|119626340|gb|EAX05935.1| DNA helicase HEL308, isoform CRA_b [Homo sapiens]
Length = 1144
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 247/705 (35%), Positives = 391/705 (55%), Gaps = 38/705 (5%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V EK L+ E F++EEYAG KG++PPTKR+ KKS+YI TIEKG L+ SLI+
Sbjct: 436 IVQEKISGLSSFGIELGFFVEEYAGSKGRFPPTKRR-EKKSLYIATIEKGHSLVNSLIET 494
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIE 120
RID +GL+V+DE HM+ E RG LE ++K+LY K+ QI MSAT+ N+ L F++
Sbjct: 495 GRIDSLGLVVVDELHMIGEGSRGATLEMTLAKILYTSKTTQIIGMSATLNNVEDLQKFLQ 554
Query: 121 GITYVENSRPTKHSEYVTVDKRVFQ----SFDGKSLTEIYADNLDYSLTGSGPDAVLHLV 176
Y RP + EY+ ++ +++ + +G + + + +L PD ++ LV
Sbjct: 555 AEYYTSQFRPVELKEYLKINDTIYEVDSKAENGMTFSRLLNYKYSDTLKKMDPDHLVALV 614
Query: 177 Q---GNLMVLIFCSSKIACSNLA-LRLQFDRFPGTKEY---KKQEKEDLIEALKEENDGK 229
N L+FC SK C N+A + +F +KEY K++EK ++I+ LK +G
Sbjct: 615 TEVIPNYSCLVFCPSKKNCENVAEMICKF----LSKEYLKHKEKEKCEVIKNLKNIGNGN 670
Query: 230 LSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIR 289
L L+ I +GVAYHH+ LT+ ER+L+EEAY G L + CTSTLAAGVNLPA+RVI+R
Sbjct: 671 LCPVLKRTIPFGVAYHHSGLTSDERKLLEEAYSTGVLCLFTCTSTLAAGVNLPARRVILR 730
Query: 290 DSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHM 349
YV ++F+ N YKQM+GRAGR G+ GESI++ + +D + ++ E SH+
Sbjct: 731 APYVAKEFLKRNQYKQMIGRAGRAGIDTIGESILILQE-KDKQQVLELITKPLENCYSHL 789
Query: 350 D---PPTLVDLILEVVAANLCSSLEDVKTLIKHTLF-YQLKSPEDQQTFLETT---LSEI 402
+ L L ++ + ++L+D+ + T F Q K +++ E T L +
Sbjct: 790 VQEFTKGIQTLFLSLIGLKIATNLDDIYHFMNGTFFGVQQKVLLKEKSLWEITVESLRYL 849
Query: 403 VASLLASKGTMLTMNEAG--HLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNS 460
L K T+ E + +T + +A+ + + C I+Y DL L +
Sbjct: 850 TEKGLLQKDTIYKSEEEVQYNFHITKLGRASFKGTIDLAYCDILYRDLKKGLEGLVLESL 909
Query: 461 LHMLFLVIP--LEYRIPSDGILLSRSKVYDRYTKFHPQTLRVAEALGVTENLVALNVTGK 518
LH+++L P L + D ++ R ++++ P VA LGV+E+ + +G+
Sbjct: 910 LHLIYLTTPYDLVSQCNPDWMIYFR-----QFSQLSPAEQNVAAILGVSESFIGKKASGQ 964
Query: 519 LKDEK--KALLCRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRF 576
+K K ++ R + + +LY +L N V++ + + ++QN L T+ F+S V F
Sbjct: 965 AIGKKVDKNVVNRLYLSFVLYTLLKETNIWTVSEKFNMPRGYIQNLLTGTASFSSCVLHF 1024
Query: 577 CEELPELWCYKQLLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIARA 636
CEEL E W Y+ LL +L + L YC L LM++ GV GRA+QL +AGY SL +A A
Sbjct: 1025 CEELEEFWVYRALLVELTKKLTYCVKAELIPLMEVTGVLEGRAKQLYSAGYKSLMHLANA 1084
Query: 637 DAKEMVAKIRHLPLRSARNLISAAKLHFITKMDKVEAMKNLIQNL 681
+ + +V I HL R A+ ++S+AK+ +K EA++ ++ L
Sbjct: 1085 NPEVLVRTIDHLSRRQAKQIVSSAKMLL---HEKAEALQEEVEEL 1126
>gi|397524624|ref|XP_003832289.1| PREDICTED: helicase POLQ-like [Pan paniscus]
Length = 1101
Score = 390 bits (1002), Expect = e-105, Method: Compositional matrix adjust.
Identities = 247/705 (35%), Positives = 390/705 (55%), Gaps = 38/705 (5%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V EK L+ E F++EEYAG KG++PPTKR+ KKS+YI TIEKG L+ SLI+
Sbjct: 393 IVQEKISGLSSFGIELGFFVEEYAGSKGRFPPTKRR-EKKSLYIATIEKGHSLVNSLIET 451
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIE 120
RID +GL+V+DE HM+ E RG LE ++K+LY K+ QI MSAT+ N+ L F++
Sbjct: 452 GRIDSLGLVVVDELHMIGEGSRGATLEMTLAKILYTSKTTQIIGMSATLNNVEDLQKFLQ 511
Query: 121 GITYVENSRPTKHSEYVTVDKRVFQ----SFDGKSLTEIYADNLDYSLTGSGPDAVLHLV 176
Y RP + EY+ ++ +++ + +G + + + +L PD ++ LV
Sbjct: 512 AEYYTSQFRPVELKEYLKINDTIYEVDSKAENGMTFSRLLNYKYSDTLKKMDPDHLVALV 571
Query: 177 Q---GNLMVLIFCSSKIACSNLA-LRLQFDRFPGTKEY---KKQEKEDLIEALKEENDGK 229
N L+FC SK C N+A + +F +KEY K++EK ++I+ LK +G
Sbjct: 572 TEVIPNYSCLVFCPSKKNCENVAEMICKF----LSKEYLKHKEKEKCEVIKNLKNIGNGN 627
Query: 230 LSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIR 289
L L+ I +GVAYHH+ LT+ ER+L+EEAY G L + CTSTLAAGVNLPA+RVI+R
Sbjct: 628 LCPVLKRTIPFGVAYHHSGLTSDERKLLEEAYSTGVLCLFTCTSTLAAGVNLPARRVILR 687
Query: 290 DSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHM 349
YV ++F+ N YKQM+GRAGR G+ GESI++ + +D + ++ E SH+
Sbjct: 688 APYVAKEFLKRNQYKQMIGRAGRAGIDTIGESILILQE-KDKQQVLELITKPLENCYSHL 746
Query: 350 D---PPTLVDLILEVVAANLCSSLEDVKTLIKHTLF-YQLKSPEDQQTFLETT---LSEI 402
+ L L ++ + +L+D+ + T F Q K +++ E T L +
Sbjct: 747 VQEFTKGIQTLFLSLIGLKIAMNLDDIYHFMNGTFFGVQQKVLLKEKSLWEITVESLRYL 806
Query: 403 VASLLASKGTMLTMNEAG--HLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNS 460
L K T+ E + +T + +A+ + + C I+Y DL L +
Sbjct: 807 TEKGLLQKDTIYKSEEEVQYNFHITKLGRASFKGTIDLAYCDILYRDLKKGLEGLVLESL 866
Query: 461 LHMLFLVIP--LEYRIPSDGILLSRSKVYDRYTKFHPQTLRVAEALGVTENLVALNVTGK 518
LH+++L P L + D ++ R ++++ P VA LGV+E+ + +G+
Sbjct: 867 LHLIYLTTPYDLVSQCNPDWMIYFR-----QFSQLSPAEQNVAAILGVSESFIGKKASGQ 921
Query: 519 LKDEK--KALLCRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRF 576
+K K ++ R + + +LY +L N V++ + + ++QN L T+ F+S V F
Sbjct: 922 AIGKKVDKDVVNRLYLSFVLYTLLKETNIWTVSEKFNMPRGYIQNLLTGTASFSSCVLHF 981
Query: 577 CEELPELWCYKQLLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIARA 636
CEEL E W Y+ LL +L + L YC L LM++ GV GRA+QL +AGY SL +A A
Sbjct: 982 CEELEEFWVYRALLVELTKKLTYCVKAELIPLMEVTGVLEGRAKQLYSAGYKSLMHLANA 1041
Query: 637 DAKEMVAKIRHLPLRSARNLISAAKLHFITKMDKVEAMKNLIQNL 681
+ + +V I HL R A+ ++S+AK+ +K EA++ ++ L
Sbjct: 1042 NPEVLVRTIDHLSRRQAKQIVSSAKMLL---HEKAEALQEEVEEL 1083
>gi|195492753|ref|XP_002094126.1| GE21661 [Drosophila yakuba]
gi|194180227|gb|EDW93838.1| GE21661 [Drosophila yakuba]
Length = 1052
Score = 390 bits (1002), Expect = e-105, Method: Compositional matrix adjust.
Identities = 258/741 (34%), Positives = 394/741 (53%), Gaps = 64/741 (8%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V EK +++ A + F +EEY KG+ PP R+ ++S++I +IEKG+ L+ SLI
Sbjct: 322 IVQEKVSAMSPFAIDLDFIVEEYTAGKGKCPPQPRR-KRRSLFIASIEKGAVLMDSLIDV 380
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIE 120
R EIGL+V+DE H++ E RG LE ++KV++L +IQI MSATIGN++ +S+F+
Sbjct: 381 QRPHEIGLVVVDELHLIGERGRGATLEAFLTKVMFLNANIQIVGMSATIGNLSEISSFLN 440
Query: 121 GITYVENSRPTKHSEYVTVDKRVFQ-SFDGKSLTEIY--ADNLDY----SLTGSGPDAVL 173
Y RP + EY+ + + + G++L EI+ + ++DY ++ + PD +
Sbjct: 441 ADVYTRGFRPVELKEYIKCGPDLMEINSSGQTLEEIFVPSRSVDYNYSEAVKRADPDHLA 500
Query: 174 HLVQ---GNLMVLIFCSSKIACSNLALRLQFDRFPGTK--EYKKQEKEDLIEALKEENDG 228
L+ L+FC S+ C N+AL L P K E+++ EK DL++AL ++ G
Sbjct: 501 GLISECAPEHCCLVFCPSRKNCENVALLLS-RIVPKQKFFEHRRSEKLDLMDAL-DKMCG 558
Query: 229 KLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVII 288
LS L + + YG+AYHH+ LT ER+ IE AY G + +ICCTSTLAAGVNLPA+RVII
Sbjct: 559 ILSPVLAKTLPYGIAYHHSGLTTDERKYIETAYRFGVVTVICCTSTLAAGVNLPAKRVII 618
Query: 289 RDSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISS- 347
R YVG++F++L YKQMVGRAGR GL E+GESI++ ++ + L + + + +SS
Sbjct: 619 RAPYVGQEFMTLCKYKQMVGRAGRAGLGEAGESILIAQSKDNLLVGQMLFSPMDKALSSL 678
Query: 348 -HMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLF-YQLKSPEDQQTFLETTLSEIV-- 403
+ L LIL VV NL D+ L+ TL Q KS L+ + EIV
Sbjct: 679 DQQEAVGLQSLILSVVGLNLAECRRDLNRLVNSTLLSVQAKS-------LDVAVDEIVLR 731
Query: 404 ------------------------ASLLASKGTMLTMNEAGH----------LSLTSIAK 429
+ ++ S+ T AG LT+I +
Sbjct: 732 ILREMFKNKVLQLTEPPAKSKINSSDIITSQDVSQTNRPAGERRLLIGQSTPFKLTNIGR 791
Query: 430 AAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEYRIPSDGILLSRSKV-YD 488
AA +AG+ + I+ +L + L + +H+L+LV+ D + + + + +
Sbjct: 792 AAFKAGIDYKRANAIHKELKQAQQQLILTHYMHLLYLVVCFNSNERGDELFPADASILFG 851
Query: 489 RYTKFHPQTLRVAEALGVTENLVA-LNVTGKLKDEKKALLCRFFHACILYDVLNFDNHQK 547
YT + + + LG TE A L T ++ L R + IL D+LN
Sbjct: 852 VYTSLPLDSQALFQQLGFTEAHAARLFKTQSVQGPLSLQLNRLYKVLILADILNLLPLPS 911
Query: 548 VAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELWCYKQLLTDLPQTLMYCRAPNLRA 607
VA Y ++ LQ+ ++ ++ AS + R CEEL E WCYK L + + C L
Sbjct: 912 VASKYNVERGTLQHLISQSTAAASAIVRLCEELEEFWCYKPLFERILNKMDRCGTFELEP 971
Query: 608 LMDLPGVKIGRARQLLNAGYSSLELIARADAKEMVAKIRHLPLRSARNLISAAKLHFITK 667
LM+LP VKI RARQL AG+ ++E IAR +V + H+PLR A ++SAAK+ + K
Sbjct: 972 LMELPAVKINRARQLYAAGFQTIEDIARVKPTHLVQSLEHMPLRVATEIVSAAKIILMKK 1031
Query: 668 MDKV-EAMKNLIQNLQKNYDN 687
+D + E +NL LQ + N
Sbjct: 1032 LDHLEEETENLKHCLQTSDQN 1052
>gi|355569241|gb|EHH25383.1| Helicase POLQ-like protein [Macaca mulatta]
Length = 1101
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 244/708 (34%), Positives = 391/708 (55%), Gaps = 44/708 (6%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V EK L+ E F++EEYAG KG++PPTKR+ KKS+YI TIEKG L+ SLI+
Sbjct: 393 IVQEKISGLSSFGVELGFFVEEYAGSKGRFPPTKRR-EKKSLYIATIEKGHSLVNSLIET 451
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIE 120
RID +GL+V+DE HM+ E RG LE ++K+LY ++ QI MSAT+ N+ L F++
Sbjct: 452 GRIDSLGLVVVDELHMIGEGSRGATLEMTLAKILYTSRTTQIIGMSATLNNVEDLQKFLQ 511
Query: 121 GITYVENSRPTKHSEYVTVDKRVFQ----SFDGKSLTEIYADNLDYSLTGSGPDAVLHLV 176
Y RP + EY+ ++ +++ + +G + + + +L PD ++ LV
Sbjct: 512 AEYYTSQFRPVELKEYLKINDTIYEIDSKAENGMTFSRLLNYKYSETLKKMDPDHLVALV 571
Query: 177 Q---GNLMVLIFCSSKIACSNLA-LRLQFDRFPGTKEY---KKQEKEDLIEALKEENDGK 229
N L+FC SK C N+A + +F +KEY K++EK ++I+ LK +G
Sbjct: 572 TEVIPNYSCLVFCPSKKNCENVAEMICKF----LSKEYLKHKEKEKCEVIKNLKNIGNGN 627
Query: 230 LSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIR 289
L L+ I +GVAYHH+ LT+ ER+L+EEAY G L + CTSTLAAGVNLPA+RVI+R
Sbjct: 628 LCPVLKRTIPFGVAYHHSGLTSDERKLLEEAYSTGVLCLFTCTSTLAAGVNLPARRVILR 687
Query: 290 DSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHM 349
YV ++F+ N YKQM+GRAGR G+ GESI++ + +D + ++ E SH+
Sbjct: 688 APYVAKEFLKRNQYKQMIGRAGRAGIDTIGESILILQE-KDKQQVLELITRPLENCYSHL 746
Query: 350 D---PPTLVDLILEVVAANLCSSLEDVKTLIKHTLF-YQLKSPEDQQTFLETTLSE---I 402
+ L L ++ + ++L+D+ + T F Q K +++ E T+ +
Sbjct: 747 VQEFTKGIQTLFLSLIGLKIATNLDDIYHFMNGTFFGVQQKILLKEKSLWEITIESLRYL 806
Query: 403 VASLLASKGTMLTMNEAG--HLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNS 460
L K T+ E + +T + +A+ + + C I+Y DL L +
Sbjct: 807 TEKGLLQKDTICKSEEEVQYNFHITKLGRASFKGTIDLAYCDILYRDLKKGLEGLVLESL 866
Query: 461 LHMLFLVIPLEYRIPSDGILLSRSK-----VYDRYTKFHPQTLRVAEALGVTENLVALNV 515
LH+++L P + L+S+S + ++++ P VA LGV+E+ +
Sbjct: 867 LHLIYLTTPYD--------LVSQSNPDWMIYFRQFSQLSPAEQNVAAILGVSESFLGKKA 918
Query: 516 TGKLKDEK--KALLCRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKV 573
+G+ +K K ++ R + + +LY +L N V++ + + ++QN L + F+S V
Sbjct: 919 SGQAIRKKVDKDVVNRLYLSFVLYTLLKETNIWTVSEKFNMPRGYIQNLLTGAASFSSCV 978
Query: 574 YRFCEELPELWCYKQLLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELI 633
FCEEL E W Y+ LL +L + L YC L LM++ GV GRARQL +AGY SL +
Sbjct: 979 LHFCEELEEFWVYRALLVELTKKLTYCVKAELIPLMEVTGVLEGRARQLYSAGYKSLMHL 1038
Query: 634 ARADAKEMVAKIRHLPLRSARNLISAAKLHFITKMDKVEAMKNLIQNL 681
A A+ + ++ I HL R A+ +I++AK+ +K EA++ ++ L
Sbjct: 1039 ANANPEVLIKTIDHLSRRQAKQIIASAKMLL---HEKAEALQEEVEEL 1083
>gi|402869339|ref|XP_003898720.1| PREDICTED: helicase POLQ-like [Papio anubis]
Length = 1101
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 245/708 (34%), Positives = 391/708 (55%), Gaps = 44/708 (6%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V EK L+ E F++EEYAG KG++PPTKR+ KKS+YI TIEKG L+ SLI+
Sbjct: 393 IVQEKISGLSSFGVELGFFVEEYAGSKGRFPPTKRR-EKKSLYIATIEKGHSLVNSLIET 451
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIE 120
RID +GL+V+DE HM+ E RG LE ++K+LY ++ QI MSAT+ N+ L F++
Sbjct: 452 GRIDSLGLVVVDELHMIGEGSRGATLEMTLAKILYTSRTTQIIGMSATLNNVEDLQKFLQ 511
Query: 121 GITYVENSRPTKHSEYVTVDKRVFQ----SFDGKSLTEIYADNLDYSLTGSGPDAVLHLV 176
Y RP + EY+ ++ +++ + +G + + + +L PD ++ LV
Sbjct: 512 AEYYTSQFRPVELKEYLKINDTIYEIDSKAENGMTFSRLLNYKYSDTLKKMDPDHLVALV 571
Query: 177 Q---GNLMVLIFCSSKIACSNLA-LRLQFDRFPGTKEY---KKQEKEDLIEALKEENDGK 229
N L+FC SK C N+A + +F +KEY K++EK ++I+ LK +G
Sbjct: 572 TEVIPNYSCLVFCPSKKNCENVAEMICKF----LSKEYLKHKEKEKCEVIKNLKNIGNGN 627
Query: 230 LSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIR 289
L L+ I +GVAYHH+ LT+ ER+L+EEAY G L + CTSTLAAGVNLPA+RVI+R
Sbjct: 628 LCPVLKRTIPFGVAYHHSGLTSDERKLLEEAYSTGVLCLFTCTSTLAAGVNLPARRVILR 687
Query: 290 DSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHM 349
YV ++F+ N YKQM+GRAGR G+ GESI++ + +D + ++ E SH+
Sbjct: 688 APYVAKEFLKRNQYKQMIGRAGRAGIDTIGESILILQE-KDKQQILELITRPLENCYSHL 746
Query: 350 D---PPTLVDLILEVVAANLCSSLEDVKTLIKHTLF-YQLKSPEDQQTFLETT---LSEI 402
+ L L ++ + ++L+D+ + T F Q K +++ E T L +
Sbjct: 747 VQEFTKGIQTLFLSLIGLKIATNLDDIYHFMNGTFFGVQQKILLKEKSLWEITVESLRYL 806
Query: 403 VASLLASKGTMLTMNEAG--HLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNS 460
L K T+ E + +T + +A+ + + C I+Y DL L +
Sbjct: 807 TEKGLLQKDTICKSEEEVQYNFHITKLGRASFKGTIDLAYCDILYRDLKKGLEGLVLESL 866
Query: 461 LHMLFLVIPLEYRIPSDGILLSRSK-----VYDRYTKFHPQTLRVAEALGVTENLVALNV 515
LH+++L P + L+S+S + ++++ P VA LGV+E+ +
Sbjct: 867 LHLIYLTTPYD--------LVSQSNPDWMIYFRQFSQLSPAEQNVAAILGVSESFLGKKA 918
Query: 516 TGKLKDEK--KALLCRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKV 573
+G+ +K K ++ R + + +LY +L N V++ + + ++QN L + F+S V
Sbjct: 919 SGQAIRKKVDKDIVNRLYLSFVLYTLLKETNIWTVSEKFNMPRGYIQNLLTGAASFSSCV 978
Query: 574 YRFCEELPELWCYKQLLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELI 633
FCEEL E W Y+ LL +L + L YC L LM++ GV GRARQL +AGY SL +
Sbjct: 979 LHFCEELEEFWVYRALLVELTKKLTYCVKAELIPLMEVTGVLEGRARQLYSAGYKSLMHL 1038
Query: 634 ARADAKEMVAKIRHLPLRSARNLISAAKLHFITKMDKVEAMKNLIQNL 681
A A+ + ++ I HL R A+ +I++AK+ +K EA++ ++ L
Sbjct: 1039 ANANPEVLIKTIDHLSRRQAKQIIASAKMLL---HEKAEALQEEVEEL 1083
>gi|332233399|ref|XP_003265889.1| PREDICTED: helicase POLQ-like [Nomascus leucogenys]
Length = 1101
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 252/705 (35%), Positives = 392/705 (55%), Gaps = 38/705 (5%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V EK L+ E F++EEYAG KG++PPTKR+ KKS+YI TIEKG L+ SLI+
Sbjct: 393 IVQEKISGLSSFGIELGFFVEEYAGSKGRFPPTKRR-EKKSLYIATIEKGHSLVNSLIET 451
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIE 120
RID +GL+VIDE HM+ E RG LE ++K+LY K+ QI MSAT+ N+ L F++
Sbjct: 452 GRIDSLGLVVIDELHMIGEGSRGATLEMTLAKILYTSKTTQIIGMSATLNNVEDLQKFLQ 511
Query: 121 GITYVENSRPTKHSEYVTVDKRVFQSFDGKS---LTEIYADNLDYS--LTGSGPDAVLHL 175
Y RP + EY+ ++ +++ D K+ +T + N YS L PD ++ L
Sbjct: 512 AEYYTSQFRPVELKEYLKINDTIYE-VDSKAENGMTFSHLLNYKYSDTLKKMDPDHLVAL 570
Query: 176 VQ---GNLMVLIFCSSKIACSNLALRLQFDRFPGTKEY---KKQEKEDLIEALKEENDGK 229
V N L+FC SK C N+A + +F +KEY K++EK ++I+ LK +G
Sbjct: 571 VTEVIPNYSCLVFCPSKKNCENVAEMIC--KFL-SKEYLKHKEKEKCEVIKNLKNIGNGN 627
Query: 230 LSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIR 289
L L+ I +GVAYHH+ LT+ ER+L+EEAY G L + CTSTLAAGVNLPA+RVI+R
Sbjct: 628 LCPVLKRTIPFGVAYHHSGLTSDERKLLEEAYSTGVLCLFTCTSTLAAGVNLPARRVILR 687
Query: 290 DSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHM 349
YV ++F+ N YKQM+GRAGR G+ GESI++ + +D + ++ E SH+
Sbjct: 688 APYVAKEFLKRNQYKQMIGRAGRAGIDTVGESILILQE-KDKQQVLELITKPLENCYSHL 746
Query: 350 D---PPTLVDLILEVVAANLCSSLEDVKTLIKHTLF-YQLKSPEDQQTFLETT---LSEI 402
+ L L ++ + ++L+D+ + T F Q K +++ E T L +
Sbjct: 747 VQEFTKGIQTLFLSLIGLKIATNLDDIYHFMNGTFFGVQQKILLKEKSLWEITVESLRYL 806
Query: 403 VASLLASKGTMLTMNEAG--HLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNS 460
L K T+ E + +T + +A+ + + C I+Y DL L +
Sbjct: 807 TEKGLLQKDTIYKSEEEVQYNFHITKLGRASFKGTIDLAYCDILYRDLKKGLEGLVLESL 866
Query: 461 LHMLFLVIP--LEYRIPSDGILLSRSKVYDRYTKFHPQTLRVAEALGVTENLVALNVTGK 518
LH+++L P L + D ++ R ++++ P VA LGV+E+ + +G+
Sbjct: 867 LHLIYLTTPYDLVSQCNPDWMIYFR-----QFSQLSPAEQNVAAILGVSESFIGKKASGQ 921
Query: 519 LKDEK--KALLCRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRF 576
+K K ++ R + + +LY +L N V++ + + ++QN L + F+S V F
Sbjct: 922 AIRKKVDKDVVNRLYLSFVLYTLLKETNIWTVSEKFNMPRGYIQNLLTGAASFSSCVLHF 981
Query: 577 CEELPELWCYKQLLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIARA 636
CEEL E W Y+ LL +L + L YC L LM++ GV GRA+QL +AGY SL +A A
Sbjct: 982 CEELEEFWVYRALLVELTKKLTYCVKAELIPLMEVTGVLEGRAKQLHSAGYKSLMHLANA 1041
Query: 637 DAKEMVAKIRHLPLRSARNLISAAKLHFITKMDKVEAMKNLIQNL 681
+ + +V I HL R A+ ++S+AK+ +K EA++ ++ L
Sbjct: 1042 NPEVLVRTIDHLSRRQAKQIVSSAKMLL---HEKAEALQEEVEEL 1083
>gi|109074228|ref|XP_001104832.1| PREDICTED: helicase, POLQ-like [Macaca mulatta]
Length = 1101
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 245/708 (34%), Positives = 391/708 (55%), Gaps = 44/708 (6%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V EK L+ E F++EEYAG KG++PPTKR+ KKS+YI TIEKG L+ SLI+
Sbjct: 393 IVQEKISGLSSFGVELGFFVEEYAGSKGRFPPTKRR-EKKSLYIATIEKGHSLVNSLIET 451
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIE 120
RID +GL+V+DE HM+ E RG LE ++K+LY ++ QI MSAT+ N+ L F++
Sbjct: 452 GRIDSLGLVVVDELHMIGEGSRGATLEMTLAKILYTSRTTQIIGMSATLNNVEDLQKFLQ 511
Query: 121 GITYVENSRPTKHSEYVTVDKRVFQ----SFDGKSLTEIYADNLDYSLTGSGPDAVLHLV 176
Y RP + EY+ ++ +++ + +G + + + +L PD ++ LV
Sbjct: 512 AEYYTSQFRPVELKEYLKINDTIYEIDSKAENGMTFSRLLNYKYSETLKKMDPDHLVALV 571
Query: 177 Q---GNLMVLIFCSSKIACSNLA-LRLQFDRFPGTKEY---KKQEKEDLIEALKEENDGK 229
N L+FC SK C N+A + +F +KEY K++EK ++I+ LK +G
Sbjct: 572 TEVIPNYSCLVFCPSKKNCENVAEMICKF----LSKEYLKHKEKEKCEVIKNLKNIGNGN 627
Query: 230 LSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIR 289
L L+ I +GVAYHH+ LT+ ER+L+EEAY G L + CTSTLAAGVNLPA+RVI+R
Sbjct: 628 LCPVLKRTIPFGVAYHHSGLTSDERKLLEEAYSTGVLCLFTCTSTLAAGVNLPARRVILR 687
Query: 290 DSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHM 349
YV ++F+ N YKQM+GRAGR G+ GESI++ + +D + ++ E SH+
Sbjct: 688 APYVAKEFLKRNQYKQMIGRAGRAGIDTIGESILILQE-KDKQQVLELITRPLENCYSHL 746
Query: 350 D---PPTLVDLILEVVAANLCSSLEDVKTLIKHTLF-YQLKSPEDQQTFLETT---LSEI 402
+ L L ++ + ++L+D+ + T F Q K +++ E T L +
Sbjct: 747 VQEFTKGIQTLFLSLIGLKIATNLDDIYHFMNGTFFGVQQKILLKEKSLWEITVESLRYL 806
Query: 403 VASLLASKGTMLTMNEAG--HLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNS 460
L K T+ E + +T + +A+ + + C I+Y DL L +
Sbjct: 807 TEKGLLQKDTICKSEEEVQYNFHITKLGRASFKGTIDLAYCDILYRDLKKGLEGLVLESL 866
Query: 461 LHMLFLVIPLEYRIPSDGILLSRSK-----VYDRYTKFHPQTLRVAEALGVTENLVALNV 515
LH+++L P + L+S+S + ++++ P VA LGV+E+ +
Sbjct: 867 LHLIYLTTPYD--------LVSQSNPDWMIYFRQFSQLSPAEQNVAAILGVSESFLGKKA 918
Query: 516 TGKLKDEK--KALLCRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKV 573
+G+ +K K ++ R + + +LY +L N V++ + + ++QN L + F+S V
Sbjct: 919 SGQAIRKKVDKDVVNRLYLSFVLYTLLKETNIWTVSEKFNMPRGYIQNLLTGAASFSSCV 978
Query: 574 YRFCEELPELWCYKQLLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELI 633
FCEEL E W Y+ LL +L + L YC L LM++ GV GRARQL +AGY SL +
Sbjct: 979 LHFCEELEEFWVYRALLVELTKKLTYCVKAELIPLMEVTGVLEGRARQLYSAGYKSLMHL 1038
Query: 634 ARADAKEMVAKIRHLPLRSARNLISAAKLHFITKMDKVEAMKNLIQNL 681
A A+ + ++ I HL R A+ +I++AK+ +K EA++ ++ L
Sbjct: 1039 ANANPEVLIKTIDHLSRRQAKQIIASAKMLL---HEKAEALQEEVEEL 1083
>gi|296196119|ref|XP_002745688.1| PREDICTED: helicase POLQ-like [Callithrix jacchus]
Length = 1101
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 248/706 (35%), Positives = 391/706 (55%), Gaps = 40/706 (5%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V EK L+ E F++EEYAG KG++PPTKR+ KKS+YI TIEKG L+ SLI+
Sbjct: 393 IVQEKISGLSSFGIELGFFVEEYAGSKGRFPPTKRR-EKKSLYIATIEKGHSLVNSLIET 451
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIE 120
RID +GL+V+DE HM+ E RG ILE ++K+LY K+ QI MSAT+ N+ L F++
Sbjct: 452 GRIDSLGLVVVDELHMIGEGSRGAILEMTLAKILYTSKTTQIIGMSATLNNVEDLQKFLQ 511
Query: 121 GITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEI-YADNLDY----SLTGSGPDAVLHL 175
Y RP + EY+ ++ +++ D K+ + ++ L+Y +L PD ++ L
Sbjct: 512 AEYYTSQFRPVELKEYLKINDTIYE-IDSKAENGMTFSRFLNYKYSDTLKKMDPDHLVAL 570
Query: 176 VQ---GNLMVLIFCSSKIACSNLA-LRLQFDRFPGTKEY---KKQEKEDLIEALKEENDG 228
V N L+FC SK C N+A + +F +KEY K++EK ++I+ LK G
Sbjct: 571 VTEVIPNYSCLVFCPSKKNCENVAEMICKF----LSKEYLKHKEKEKCEVIKNLKNIGSG 626
Query: 229 KLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVII 288
L L+ I +GVAYHH+ LT+ ER+L+EEAY G L + CTSTLAAGVNLPA+RVI+
Sbjct: 627 NLCPVLKRTIPFGVAYHHSGLTSDERKLLEEAYSTGVLCLFTCTSTLAAGVNLPARRVIL 686
Query: 289 RDSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSH 348
R YV +F+ N YKQM+GRAGR G+ GESI++ + +D + ++ E SH
Sbjct: 687 RAPYVAMEFLKRNQYKQMIGRAGRAGIDTIGESILILQE-KDKQQVLELITRPLENCYSH 745
Query: 349 M---DPPTLVDLILEVVAANLCSSLEDVKTLIKHTLF-YQLKSPEDQQTFLETTLSEIV- 403
+ + L L ++ + ++L+D+ + T F Q K +++ E T+ +
Sbjct: 746 LFQEFTKGIQTLFLSLIGLKIATNLDDIYHFMNGTFFGVQQKILLKEKSLWEITVESLRY 805
Query: 404 ---ASLLASKGTMLTMNEAGH-LSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLN 459
LL + E H +T + +A+ + + C I+Y DL L +
Sbjct: 806 LTEKGLLQKDTIYKSEEEVQHNFHITKLGRASFKGTIDLAYCDILYRDLKKGLEGLVLES 865
Query: 460 SLHMLFLVIP--LEYRIPSDGILLSRSKVYDRYTKFHPQTLRVAEALGVTENLVALNVTG 517
LH+++L P L + D ++ R ++++ P VA LGV+E+ + +G
Sbjct: 866 LLHLIYLTTPYDLVSQCNPDWMIYFR-----QFSQLSPAEQNVAAILGVSESFIGKKASG 920
Query: 518 KLKDEK--KALLCRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYR 575
+ +K K ++ R + + +LY +L N V++ + + ++QN L + F+S V
Sbjct: 921 QAIRKKVDKDVVNRLYLSFVLYSLLKETNIWTVSEKFNMPRGYVQNLLTGAASFSSCVLH 980
Query: 576 FCEELPELWCYKQLLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIAR 635
FCEEL E W Y+ LL +L + L YC L LM++ GV GRA+QL +AGY SL +A
Sbjct: 981 FCEELEEFWVYRALLVELTKKLTYCVKAELIPLMEVTGVLEGRAKQLYSAGYKSLTHLAN 1040
Query: 636 ADAKEMVAKIRHLPLRSARNLISAAKLHFITKMDKVEAMKNLIQNL 681
A+ + ++ I HL R A+ ++S+AK+ +K EA++ ++ L
Sbjct: 1041 ANPEVLIRTIDHLSRRQAKQIVSSAKMLL---HEKAEALQEEVEEL 1083
>gi|380789743|gb|AFE66747.1| helicase POLQ-like [Macaca mulatta]
gi|383412853|gb|AFH29640.1| helicase POLQ-like [Macaca mulatta]
Length = 1101
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 245/708 (34%), Positives = 391/708 (55%), Gaps = 44/708 (6%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V EK L+ E F++EEYAG KG++PPTKR+ KKS+YI TIEKG L+ SLI+
Sbjct: 393 IVQEKISGLSSFGVELGFFVEEYAGSKGRFPPTKRR-EKKSLYIATIEKGHSLVNSLIET 451
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIE 120
RID +GL+V+DE HM+ E RG LE ++K+LY ++ QI MSAT+ N+ L F++
Sbjct: 452 GRIDSLGLVVVDELHMIGEGSRGATLEMTLAKILYTSRTTQIIGMSATLNNVEDLQKFLQ 511
Query: 121 GITYVENSRPTKHSEYVTVDKRVFQ----SFDGKSLTEIYADNLDYSLTGSGPDAVLHLV 176
Y RP + EY+ ++ +++ + +G + + + +L PD ++ LV
Sbjct: 512 AEYYTSQFRPVELKEYLKINDTIYEIDSKAENGMTFSRLLNYKYSETLKKMDPDHLVALV 571
Query: 177 Q---GNLMVLIFCSSKIACSNLA-LRLQFDRFPGTKEY---KKQEKEDLIEALKEENDGK 229
N L+FC SK C N+A + +F +KEY K++EK ++I+ LK +G
Sbjct: 572 TEVIPNYSCLVFCPSKKNCENVAEMICKF----LSKEYLKHKEKEKCEVIKNLKNIGNGN 627
Query: 230 LSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIR 289
L L+ I +GVAYHH+ LT+ ER+L+EEAY G L + CTSTLAAGVNLPA+RVI+R
Sbjct: 628 LCPVLKRTIPFGVAYHHSGLTSDERKLLEEAYSTGVLCLFTCTSTLAAGVNLPARRVILR 687
Query: 290 DSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHM 349
YV ++F+ N YKQM+GRAGR G+ GESI++ + +D + ++ E SH+
Sbjct: 688 APYVAKEFLKRNQYKQMIGRAGRAGIDTIGESILILQE-KDKQQVLELITRPLENCYSHL 746
Query: 350 D---PPTLVDLILEVVAANLCSSLEDVKTLIKHTLF-YQLKSPEDQQTFLETT---LSEI 402
+ L L ++ + ++L+D+ + T F Q K +++ E T L +
Sbjct: 747 VQEFTKGIQTLFLSLIGLKIATNLDDIYHFMNGTFFGVQQKILLKEKSLWEITVESLRYL 806
Query: 403 VASLLASKGTMLTMNEAG--HLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNS 460
L K T+ E + +T + +A+ + + C I+Y DL L +
Sbjct: 807 TEKGLLQKDTICKSEEEVQYNFHITKLGRASFKGTIDLAYCDILYRDLKKGLEGLVLESL 866
Query: 461 LHMLFLVIPLEYRIPSDGILLSRSK-----VYDRYTKFHPQTLRVAEALGVTENLVALNV 515
LH+++L P + L+S+S + ++++ P VA LGV+E+ +
Sbjct: 867 LHLIYLTTPYD--------LVSQSNPDWMIYFRQFSQLSPAEQNVAAILGVSESFLGKKA 918
Query: 516 TGKLKDEK--KALLCRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKV 573
+G+ +K K ++ R + + +LY +L N V++ + + ++QN L + F+S V
Sbjct: 919 SGQAIRKKVDKDVVNRLYLSFVLYTLLKETNIWTVSEKFNMPRGYIQNLLTGAASFSSCV 978
Query: 574 YRFCEELPELWCYKQLLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELI 633
FCEEL E W Y+ LL +L + L YC L LM++ GV GRARQL +AGY SL +
Sbjct: 979 LHFCEELEEFWVYRALLVELTKKLTYCVKAELIPLMEVTGVLEGRARQLYSAGYKSLMHL 1038
Query: 634 ARADAKEMVAKIRHLPLRSARNLISAAKLHFITKMDKVEAMKNLIQNL 681
A A+ + ++ I HL R A+ +I++AK+ +K EA++ ++ L
Sbjct: 1039 ANANPEVLIKTIDHLSRRQAKQIIASAKMLL---HEKAEALQEEVEEL 1083
>gi|390346488|ref|XP_796097.3| PREDICTED: helicase POLQ-like isoform 2 [Strongylocentrotus
purpuratus]
gi|390346490|ref|XP_003726564.1| PREDICTED: helicase POLQ-like isoform 1 [Strongylocentrotus
purpuratus]
Length = 1173
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 256/701 (36%), Positives = 387/701 (55%), Gaps = 64/701 (9%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V EK SL A + F +EEYAG KG PP KR+ NK ++Y+CTIEK L+ +IQE
Sbjct: 493 IVQEKVTSLTPLAVDLGFLVEEYAGSKGSVPPRKRR-NKHALYVCTIEKAHTLVNCMIQE 551
Query: 61 NRIDEIGLIVIDEFHMLNEP-QRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFI 119
+R+ EIGL+V+DE HM+ E +RG LE +SK+LYL+K QI MSAT+ NI L++F+
Sbjct: 552 DRMREIGLVVVDELHMVGEGGRRGASLEICLSKLLYLEK-CQILGMSATLSNIKDLASFL 610
Query: 120 EGITYVENSRPTKHSEYVTVDKRVFQSFDGKSL------TEIYADNLDYS--LTGSGPDA 171
+ Y RP EY+ ++ +FQ G +L T + YS + + PD
Sbjct: 611 KAEVYTNTFRPVDLIEYIKLEDNIFQVNPGSNLPEDEKFTHVRTITFPYSKSMLKNDPD- 669
Query: 172 VLHLVQGNLMV------LIFCSSKIACSNLALRLQFDRFPGTK-----EYKKQEKEDLIE 220
HLV L V L FC++K C N+A + P TK ++K +EKE+L+
Sbjct: 670 --HLVGLALEVIPTNSCLFFCATKKNCQNVAENI-CRYIPRTKAKQLFQHKHKEKEELLL 726
Query: 221 ALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVN 280
+L+ E D L L I YG AYHH LT ER+LIE+AY GTL ++ TSTLAAGVN
Sbjct: 727 SLRRECDNNLCPTLRRTIPYGAAYHHGGLTMDERKLIEDAYSDGTLCLLAATSTLAAGVN 786
Query: 281 LPAQRVIIRDSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNA 340
LPA+RVI+R Y+ R+ ++ + YKQMVGRAGR G SGESI++ K + L S M+N
Sbjct: 787 LPAKRVILRSPYIARELLTTSRYKQMVGRAGRAGKDTSGESILIVKPKERKL-VSEMLNG 845
Query: 341 GPEPISS------HMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQLKSPEDQQTF 394
PI+ H + + +L+L +++ + + ++ IK TL +++ E Q+
Sbjct: 846 ---PINGCFSSLMHDEGKGMRNLVLSLISLKITRTEGSLQDFIKRTLC-GIQAAEFQRDL 901
Query: 395 LE---TTLSEIVASLLASKGTMLTMNEAGHLSLTSIAKAAVQAGLSHDVCLIIYSDLLHN 451
+E L ++V L K E L +T I +AA + + D+C +Y DL
Sbjct: 902 VELAQNALQQVVDLSLVKK------TEDNVLEVTRIGQAAFKGSVDLDMCSTLYDDLKFG 955
Query: 452 -KLNFCLLNSLHMLFLVIP---LEYRIPSDGILLSRSKVYDRYTKFHPQTLRVAEALGVT 507
L NSLH+L+LV P ++ P+ I ++ +++ +VAE +GV+
Sbjct: 956 CDKGLVLANSLHLLYLVTPYDQIDSARPNWMIYMT------QFSSLSDSEHKVAELVGVS 1009
Query: 508 ENLVALNVTGKLKD------EKKALLCRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQN 561
E + +TG+ E++A RF+ +L++++ + +VA + +Q
Sbjct: 1010 EFYMQCKMTGRSSKKFTPALERRAH--RFYLTLMLWEMMKRKSIWEVAARFDTPRGFVQT 1067
Query: 562 FLNVTSYFASKVYRFCEELPELWCYKQLLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQ 621
+ FA V RFC EL E W QLLT L L YC +L L+++PGVK GRA+Q
Sbjct: 1068 VFTSAASFAFSVQRFCAELEEFWAVHQLLTKLVYDLTYCATTDLMPLLEIPGVKQGRAKQ 1127
Query: 622 LLNAGYSSLELIARADAKEMVAKIRHLPLRSARNLISAAKL 662
L+ AGY +L +A AD ++V+KI +LP++ A+ ++++AK+
Sbjct: 1128 LVMAGYKTLHHLAHADHADLVSKIDYLPIKVAQQIVASAKV 1168
>gi|355749273|gb|EHH53672.1| Helicase POLQ-like protein [Macaca fascicularis]
Length = 1101
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 245/708 (34%), Positives = 391/708 (55%), Gaps = 44/708 (6%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V EK L+ E F++EEYAG KG++PPTKR+ KKS+YI TIEKG L+ SLI+
Sbjct: 393 IVQEKISGLSSFGVELGFFVEEYAGSKGRFPPTKRR-EKKSLYIATIEKGHSLVNSLIET 451
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIE 120
RID +GL+V+DE HM+ E RG LE ++K+LY ++ QI MSAT+ N+ L F++
Sbjct: 452 GRIDSLGLVVVDELHMIGEGSRGATLEMTLAKILYTSRTTQIIGMSATLNNVEDLQKFLQ 511
Query: 121 GITYVENSRPTKHSEYVTVDKRVFQ----SFDGKSLTEIYADNLDYSLTGSGPDAVLHLV 176
Y RP + EY+ ++ +++ + +G + + + +L PD ++ LV
Sbjct: 512 AEYYTSQFRPVELKEYLKINDTIYEIDSKAENGMTFSRLLNYKYSDTLKKMDPDHLVALV 571
Query: 177 Q---GNLMVLIFCSSKIACSNLA-LRLQFDRFPGTKEY---KKQEKEDLIEALKEENDGK 229
N L+FC SK C N+A + +F +KEY K++EK ++I+ LK +G
Sbjct: 572 TEVIPNYSCLVFCPSKKNCENVAEMICKF----LSKEYLKHKEKEKCEVIKNLKNIGNGN 627
Query: 230 LSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIR 289
L L+ I +GVAYHH+ LT+ ER+L+EEAY G L + CTSTLAAGVNLPA+RVI+R
Sbjct: 628 LCPVLKRTIPFGVAYHHSGLTSDERKLLEEAYSTGVLCLFTCTSTLAAGVNLPARRVILR 687
Query: 290 DSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHM 349
YV ++F+ N YKQM+GRAGR G+ GESI++ + +D + ++ E SH+
Sbjct: 688 APYVAKEFLKRNQYKQMIGRAGRAGIDTIGESILILQE-KDKQQVLELITRPLENCYSHL 746
Query: 350 D---PPTLVDLILEVVAANLCSSLEDVKTLIKHTLF-YQLKSPEDQQTFLETT---LSEI 402
+ L L ++ + ++L+D+ + T F Q K +++ E T L +
Sbjct: 747 VQEFTKGIQTLFLSLIGLKIATNLDDIYHFMNGTFFGVQQKILLKEKSLWEITVESLRYL 806
Query: 403 VASLLASKGTMLTMNEAG--HLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNS 460
L K T+ E + +T + +A+ + + C I+Y DL L +
Sbjct: 807 TEKGLLQKDTICKSEEEVQYNFHITKLGRASFKGTIDLAYCDILYRDLKKGLEGLVLESL 866
Query: 461 LHMLFLVIPLEYRIPSDGILLSRSK-----VYDRYTKFHPQTLRVAEALGVTENLVALNV 515
LH+++L P + L+S+S + ++++ P VA LGV+E+ +
Sbjct: 867 LHLIYLTTPYD--------LVSQSNPDWMIYFRQFSQLSPAEQNVAAILGVSESFLGKKA 918
Query: 516 TGKLKDEK--KALLCRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKV 573
+G+ +K K ++ R + + +LY +L N V++ + + ++QN L + F+S V
Sbjct: 919 SGQAIRKKVDKDVVNRLYLSFVLYTLLKETNIWTVSEKFNMPRGYIQNLLTGAASFSSCV 978
Query: 574 YRFCEELPELWCYKQLLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELI 633
FCEEL E W Y+ LL +L + L YC L LM++ GV GRARQL +AGY SL +
Sbjct: 979 LHFCEELEEFWVYRALLVELTKKLTYCVKAELIPLMEVTGVLEGRARQLYSAGYKSLMHL 1038
Query: 634 ARADAKEMVAKIRHLPLRSARNLISAAKLHFITKMDKVEAMKNLIQNL 681
A A+ + ++ I HL R A+ +I++AK+ +K EA++ ++ L
Sbjct: 1039 ANANPEVLIKTIDHLSRRQAKQIIASAKMLL---HEKAEALQEEVEEL 1083
>gi|194750315|ref|XP_001957573.1| GF23962 [Drosophila ananassae]
gi|190624855|gb|EDV40379.1| GF23962 [Drosophila ananassae]
Length = 1049
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 256/734 (34%), Positives = 393/734 (53%), Gaps = 58/734 (7%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V EK +++ A + F +EEY KG+ PP R+ ++S++I +IEKG+ L+ SLI
Sbjct: 322 IVQEKVSAMSPFAIDLDFLVEEYTAGKGKCPPQPRR-KRRSLFIASIEKGAVLMDSLIDV 380
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIE 120
R EIGL+V+DE H++ E RG LE ++KV++L +IQI MSATIGN++ +S+F+
Sbjct: 381 ERPHEIGLVVVDELHLIGERGRGATLEAFLTKVMFLNANIQIVGMSATIGNLSEISSFLN 440
Query: 121 GITYVENSRPTKHSEYVTVDKRVFQ-SFDGKSLTEIY--ADNLDY----SLTGSGPDAVL 173
Y RP + EY+ + + +G +L EI+ + +D+ ++ + PD +
Sbjct: 441 ADVYTRGFRPVELKEYIKCGPDLLEIHSEGHTLEEIFVPSRTVDFKYSEAVKRADPDHLA 500
Query: 174 HLVQ---GNLMVLIFCSSKIACSNLALRLQFDRFPGTK--EYKKQEKEDLIEALKEENDG 228
LV L+FC S+ C N+AL L P K E+++ EK DL++AL ++ G
Sbjct: 501 GLVSECAPENCCLVFCPSRKNCENVALLLS-RIVPKQKFFEHRRSEKVDLMDAL-DKMCG 558
Query: 229 KLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVII 288
LS L + + YG+AYHH+ LT ER+ IE AY G + +ICCTSTLAAGVNLPA+RVII
Sbjct: 559 ILSPVLAKTLPYGIAYHHSGLTTDERKYIETAYRFGVVTVICCTSTLAAGVNLPAKRVII 618
Query: 289 RDSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSH 348
R YVG++F++L YKQMVGRAGR GL E+GESI++ ++ +D L+ M+ + + S
Sbjct: 619 RAPYVGQEFMTLCKYKQMVGRAGRAGLGEAGESILIAQS-RDNLQVGQMLFSPMDKALSS 677
Query: 349 MDPPTLV---DLILEVVAANLCSSLEDVKTLIKHTLF----------------------- 382
MD V LIL V+ NL D+ L+ TL
Sbjct: 678 MDQQEAVGLQSLILSVIGLNLAECRRDLNRLVDSTLLSVQADTLNVAVDKVVLLILREMF 737
Query: 383 ----YQLKSPEDQQTFLETTLSEIVASLLASKGTM------LTMNEAGHLSLTSIAKAAV 432
QL P+ + + SEI+ + A++ L + ++ LTSI +AA
Sbjct: 738 KKKVLQLSEPDSKS---KIDCSEIITTQDANQSNRPAGERRLLIGQSTRFKLTSIGRAAF 794
Query: 433 QAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEYRIPSDGILLSRSKVYDR-YT 491
+AG+ + I+ +L + L N H+L+LV+ D + + + + R YT
Sbjct: 795 KAGIDYKKAQAIHKELKQAQQQLILTNYSHLLYLVVCFNSNEKGDELFPANASILFRAYT 854
Query: 492 KFHPQTLRVAEALGVTENLVA-LNVTGKLKDEKKALLCRFFHACILYDVLNFDNHQKVAK 550
++ + + LG TE A L T ++ L R + IL DVL VA
Sbjct: 855 SLPVESQALFKQLGFTEAHAARLLKTQSVQGPLSVQLNRLYKVLILEDVLELIPLPTVAN 914
Query: 551 MYGIQNSHLQNFLNVTSYFASKVYRFCEELPELWCYKQLLTDLPQTLMYCRAPNLRALMD 610
Y ++ LQ+ ++ + +S + R CEE+ E WCYK L + + C L L++
Sbjct: 915 KYNVERGTLQHLISQSIAASSAIVRLCEEMDEFWCYKPLFERILHKMDRCGTYELEPLLE 974
Query: 611 LPGVKIGRARQLLNAGYSSLELIARADAKEMVAKIRHLPLRSARNLISAAKLHFITKMDK 670
LP VKI RA+QL AG+ ++E IAR A +V + H+PLR A ++SAAK+ + K+D
Sbjct: 975 LPAVKINRAKQLYAAGFRTIEDIARIPAMTLVQSVEHMPLRVATEIVSAAKIILMKKLDH 1034
Query: 671 V-EAMKNLIQNLQK 683
+ E +NL LQ+
Sbjct: 1035 LEEETENLKVCLQR 1048
>gi|24660651|ref|NP_648178.1| mutagen-sensitive 301 [Drosophila melanogaster]
gi|7295156|gb|AAF50481.1| mutagen-sensitive 301 [Drosophila melanogaster]
gi|108385045|gb|AAR82756.2| RE48845p [Drosophila melanogaster]
Length = 1051
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 255/734 (34%), Positives = 390/734 (53%), Gaps = 53/734 (7%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V EK +++ A + F +EEY KG+ PP R+ ++S++I +IEKG+ L+ SLI
Sbjct: 321 IVQEKVSAMSPFAIDLDFIVEEYTAGKGKCPPQPRR-KRRSLFIASIEKGAVLMDSLIDV 379
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIE 120
R EIGL+V+DE H++ E RG LE ++KV++L +IQI MSATIGN++ +S+F+
Sbjct: 380 QRPHEIGLVVVDELHLIGEKGRGATLEAFLTKVMFLNANIQIVGMSATIGNLSEISSFLN 439
Query: 121 GITYVENSRPTKHSEYVTVDKRVFQ-SFDGKSLTEIYAD------NLDYSLTGSGPDAVL 173
Y RP + EY+ + + + G++L EI+ N ++ + PD +
Sbjct: 440 ADVYTRGFRPVELKEYIKCGPDLLEINSAGQTLEEIFVPSRSVEYNYSEAVKRADPDHLA 499
Query: 174 HLVQ---GNLMVLIFCSSKIACSNLALRLQFDRFPGTK--EYKKQEKEDLIEALKEENDG 228
L+ L+FC S+ C N+AL L P K E+++ EK DL++AL ++ G
Sbjct: 500 GLISECAPEHCCLVFCPSRKNCENVALLLS-RIVPKHKFFEHRRSEKLDLMDAL-DKMCG 557
Query: 229 KLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVII 288
LS L + + YG+AYHH+ LT ER+ IE AY G + +ICCTSTLAAGVNLPA+RVII
Sbjct: 558 ILSPVLAKTLPYGIAYHHSGLTTDERKYIETAYRFGVVTVICCTSTLAAGVNLPAKRVII 617
Query: 289 RDSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISS- 347
R YVG++F++L YKQMVGRAGR GL E+GESI++ ++ + L + + + +SS
Sbjct: 618 RAPYVGQEFLTLCKYKQMVGRAGRAGLGEAGESILIAQSKDNLLVGQMLFSPMDKALSSL 677
Query: 348 -HMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLF-YQLKSPE---------------- 389
+ L LIL VV NL D+ L+ TL Q KS E
Sbjct: 678 DQNEAVGLQSLILSVVGLNLAECRRDLNRLVNSTLLSVQAKSLEVAVNEIVLRILREMFK 737
Query: 390 -------DQQTFLETTLSEIVASLLASKGTM------LTMNEAGHLSLTSIAKAAVQAGL 436
+ Q + S+I+ S S+ L + ++ LT+I +AA +AG+
Sbjct: 738 NKVLQLAEPQAKSKINSSDIITSQDVSQANRPAGDRRLLIGQSTPFKLTNIGRAAFKAGI 797
Query: 437 SHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEYRIPSDGILLSRSKV-YDRYTKFHP 495
+ I+ +L + L N LH+L+LV+ D + + + + + YT
Sbjct: 798 DYKRANAIHKELKQAQQQLILTNYLHLLYLVVCFNSNERGDELFPADASILFGVYTSLPL 857
Query: 496 QTLRVAEALGVTENLVA-LNVTGKLKDEKKALLCRFFHACILYDVLNFDNHQKVAKMYGI 554
+ + + LG TE A L T ++ L R + IL D+LN VA Y +
Sbjct: 858 DSQAMFKQLGFTEAHAARLFKTQSVQGPLSLQLNRLYKVLILADILNLLPIPSVASKYNV 917
Query: 555 QNSHLQNFLNVTSYFASKVYRFCEELPELWCYKQLLTDLPQTLMYCRAPNLRALMDLPGV 614
+ LQ+ ++ ++ AS + R CEEL E WCYK L + + C L LM+LP V
Sbjct: 918 ERGTLQHLISQSTAAASAIVRLCEELEEFWCYKPLFERILHKMDRCGTFELEPLMELPAV 977
Query: 615 KIGRARQLLNAGYSSLELIARADAKEMVAKIRHLPLRSARNLISAAKLHFITKMD----K 670
KI RARQL AG+ ++ IAR +V + H+PLR A ++SAAK+ + K+D +
Sbjct: 978 KINRARQLYAAGFQTIGDIARVRPSHLVQSLEHMPLRVATEIVSAAKIILMKKLDHLEEE 1037
Query: 671 VEAMKNLIQNLQKN 684
E +K+ ++ KN
Sbjct: 1038 TENLKDCLKTSDKN 1051
>gi|380011352|ref|XP_003689772.1| PREDICTED: helicase POLQ-like [Apis florea]
Length = 929
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 266/736 (36%), Positives = 396/736 (53%), Gaps = 75/736 (10%)
Query: 7 QSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEI 66
QS+ A E F +EEYA KG +PP KR+ K SIYICTIEK LI SLI+E R+ EI
Sbjct: 205 QSMTPFALELGFLVEEYAATKGTFPPKKRR-KKNSIYICTIEKALGLINSLIEEKRLHEI 263
Query: 67 GLIVIDEFHMLNE-PQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYV 125
G+IV+DE H+L E RG LE +++KVLY+ +I I MSATIGN+ ++TF+ Y
Sbjct: 264 GIIVVDELHLLGENGGRGATLEVLLTKVLYVNDNIHIIGMSATIGNLEEIATFLNADLYT 323
Query: 126 ENSRPTKHSEYVTVDKRVFQSFDGKS---LTEIYADNLDYSLTGS--GPDAVLHLVQGNL 180
N RP + EYV D+ ++ D K+ LT++ N YS + PD + LV +
Sbjct: 324 GNFRPIEIKEYVKCDENIWL-VDLKTEELLTDVKKINYRYSKDAAIIDPDRIAGLVMDII 382
Query: 181 ---MVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEEC 237
LIFCSS+ C N+AL L ++YK+ +K+DL+ ALK N+ L L +
Sbjct: 383 PEHSCLIFCSSRKNCENVALLLAKVLPKSLQDYKRDKKQDLLNALK--NEEGLCPILHKT 440
Query: 238 ILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGRDF 297
I +GV YHH+ LT+ ERRL+E+A+ +GTL +ICCTSTLA G+NLPA+RVI+R Y+G F
Sbjct: 441 INFGVVYHHSGLTSEERRLLEDAFKSGTLCVICCTSTLATGINLPARRVILRSPYIGNQF 500
Query: 298 ISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISS--HMDPPTLV 355
++L+ YKQMVGRAGR G+ GESI++CK+ + + + ++ + + S H+D +
Sbjct: 501 LNLSRYKQMVGRAGRAGMGNIGESILICKS-NELQKITELLKSKMDDSLSTLHIDRDRGI 559
Query: 356 -DLILEVVAANLCSSLEDVKTLIKHTLF---------------------------YQLKS 387
+LIL + ++ ++ ++ + K TL ++K
Sbjct: 560 NNLILSAILFSMATTRYELHKIAKRTLLNIQQKRLNVNIKQIVDETITEFLKSGVIKIKE 619
Query: 388 PEDQQTFLETTLSEIVAS---------LLASKGTMLTMNEAGHLSLTSIAKAAVQAGLSH 438
E L+ +S + S + K ++ + L L S+ +AA++ +
Sbjct: 620 KEKNVNILKPNISVVFPSQDISSCPTKIETKKKRIIKLTNNSKLELCSLGRAAMKGCIDM 679
Query: 439 DVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEYRIPSD----GILLSRSKVYDRYTKFH 494
+ +Y DL + + LL+ LH+L+LV P Y I S G + YD
Sbjct: 680 ECAYTLYQDLKKAQEHLILLDYLHLLYLVTP--YNIISQIKPIGFI-----YYDMIINLS 732
Query: 495 PQTLRVAEALGVTENLVALNVTGKL-KDEKKALLCRFFHACILYDVLNFDNHQKVAKMYG 553
++ A LG+ E ++ G + K+ + ++ RF+ ILYD+ N K+A+ Y
Sbjct: 733 ETQMKTARLLGINEINISKIRDGLIPKNVEPRVIHRFYVTLILYDLWNQHAVYKIAEKYD 792
Query: 554 IQNSHLQNFLNVTSYFASKVYRFCEELPELWCYKQLLTDLPQTLMYCRAPNLRALMDLPG 613
I +QN L S FA V RFC+EL E W +K LL + L YC L ALMDLP
Sbjct: 793 ISRGIVQNLLTAVSSFAFSVIRFCQELDEFWAFKDLLNVFSKKLSYCCPLELEALMDLPL 852
Query: 614 VKIGRARQLLNAGYSSLELIARADAKEMVAKIRHLPLRSARNLISAAKLHFITKMDKVEA 673
VKI RARQL NAG+ ++++IA+ ++ KI +L + A +I AKL + K
Sbjct: 853 VKISRARQLYNAGFKTVQIIAKTQPIQLQEKIPYLSKKVAMQIIEGAKLLIVEK------ 906
Query: 674 MKNLIQNLQKNYDNIV 689
I+NLQ +NI+
Sbjct: 907 ----IENLQDETENIL 918
>gi|403263394|ref|XP_003924019.1| PREDICTED: helicase POLQ-like [Saimiri boliviensis boliviensis]
Length = 1099
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 254/712 (35%), Positives = 394/712 (55%), Gaps = 52/712 (7%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V EK L+ E F++EEYAG KG++PPTKR+ KKS+YI TIEKG L+ SLI+
Sbjct: 391 IVQEKISGLSSFGIELGFFVEEYAGSKGRFPPTKRR-EKKSLYIATIEKGHSLVNSLIET 449
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIE 120
RID +GL+V+DE HM+ E RG ILE ++K+LY K+ QI MSAT+ N+ L F++
Sbjct: 450 GRIDSLGLVVVDELHMIGEGSRGAILEMTLAKILYTSKTTQIIGMSATLNNVEDLQKFLQ 509
Query: 121 GITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEI-YADNLDY----SLTGSGPDAVLHL 175
Y RP + EY+ ++ +++ D K+ I ++ L+Y +L PD ++ L
Sbjct: 510 AEYYTSQFRPVELKEYLKINDTIYE-IDSKAENGITFSRFLNYKYSDTLKKMDPDHLVAL 568
Query: 176 VQ---GNLMVLIFCSSKIACSNLA-LRLQFDRFPGTKEY---KKQEKEDLIEALKEENDG 228
V N L+FC SK C N+A + +F +KEY K++EK ++I LK +G
Sbjct: 569 VTEVIPNYSCLVFCPSKKNCENVAEMICKF----LSKEYLKHKEKEKCEVINNLKNIGNG 624
Query: 229 KLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVII 288
L L+ I +GVAYHH+ LT+ ER+L+EEAY G L + CTSTLAAGVNLPA+RVI+
Sbjct: 625 NLCPVLKRTIPFGVAYHHSGLTSDERKLLEEAYSTGVLCLFTCTSTLAAGVNLPARRVIL 684
Query: 289 RDSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSH 348
R YV +F+ N YKQM+GRAGR G+ GESI++ + +D + ++ E SH
Sbjct: 685 RAPYVAMEFLKRNQYKQMIGRAGRAGIDTIGESILILQE-KDKQQVLELITRPLENCYSH 743
Query: 349 MD---PPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQLKSPEDQQTFL--ETTLSEI- 402
+ + L L ++ + ++L+D+ + T F QQ L E +L EI
Sbjct: 744 LVQEFTKGIQTLFLSLIGLKIATNLDDIYHFMNGTFFGV------QQNILLKEKSLWEIT 797
Query: 403 VASL-------LASKGTMLTMNE--AGHLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKL 453
V SL L K T+ E + +T + +A+ + + C I+Y DL
Sbjct: 798 VESLRYLTEKGLVQKDTIYKSEEEVQHNFHITKLGRASFKGTIDLAYCDILYRDLKKGLE 857
Query: 454 NFCLLNSLHMLFLVIP--LEYRIPSDGILLSRSKVYDRYTKFHPQTLRVAEALGVTENLV 511
L + LH+++L P L + D ++ R ++++ P VA LGV+E+ +
Sbjct: 858 GLVLESLLHLIYLTTPYDLVSQCNPDWMIYFR-----QFSQLSPAEQNVAAILGVSESFI 912
Query: 512 ALNVTGKLKDEK--KALLCRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYF 569
+G+ +K K ++ R + + +LY +L + V++ + + ++QN L + F
Sbjct: 913 GKKASGQAIRKKVDKDVVNRLYLSFVLYSLLKETSIWTVSEKFNMPRGYVQNLLTGAASF 972
Query: 570 ASKVYRFCEELPELWCYKQLLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSS 629
+S V FCEEL E W Y+ LL +L + L YC L LM++ GV GRA+QL +AGY S
Sbjct: 973 SSCVLHFCEELEEFWVYRALLVELTKKLTYCVKAELIPLMEVTGVLEGRAKQLYSAGYKS 1032
Query: 630 LELIARADAKEMVAKIRHLPLRSARNLISAAKLHFITKMDKVEAMKNLIQNL 681
L +A A+ + ++ I HL R A+ ++S+AK+ +K EA++ ++ L
Sbjct: 1033 LMHLANANPEVLIRTIDHLSRRQAKQIVSSAKMLL---HEKAEALQEEVEEL 1081
>gi|281346799|gb|EFB22383.1| hypothetical protein PANDA_000253 [Ailuropoda melanoleuca]
Length = 1004
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 248/707 (35%), Positives = 394/707 (55%), Gaps = 42/707 (5%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V EK L+ E F++EEYAG KG++PP KR+ KKS+YI TIEKG L+ SLI+
Sbjct: 296 IVQEKISGLSSFGIELGFFVEEYAGSKGKFPPIKRR-EKKSLYIATIEKGHSLVNSLIET 354
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIE 120
RI +GL+V+DE HM+ E RG ILE ++K+LY K+ QI MSAT+ N+ L F++
Sbjct: 355 GRIGSLGLVVVDELHMIGEGSRGAILEMTLAKILYTSKATQIIGMSATLNNVEDLQEFLQ 414
Query: 121 GITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNL---DYS--LTGSGPDAVLHL 175
Y RP + EY+ ++ +++ D K+ + L YS L PD ++ L
Sbjct: 415 AEYYTSQFRPVELKEYLKINDAIYE-VDSKAENSMTFSRLLGCQYSDTLKKMDPDHLVAL 473
Query: 176 VQ---GNLMVLIFCSSKIACSNLA-LRLQFDRFPGTKEY---KKQEKEDLIEALKEENDG 228
V N L+FC +K C N+A + +F +KEY +++EK ++I+ LK + G
Sbjct: 474 VTEVIPNYSCLVFCPTKKNCENVAEMICKF----LSKEYLKHREKEKHEVIKNLKNISSG 529
Query: 229 KLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVII 288
L L+ I +GVAYHH+ LT+ ER+L+EEAY G L + CTSTLAAGVNLPA+RVI+
Sbjct: 530 NLCPVLKRTIPFGVAYHHSGLTSDERKLLEEAYSKGVLCLFTCTSTLAAGVNLPARRVIL 589
Query: 289 RDSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSH 348
R YV ++F+ N YKQM+GRAGR G+ GESI++ + +D + +++ E SH
Sbjct: 590 RAPYVAKEFLKRNQYKQMIGRAGRAGIDSIGESILILQE-KDKQQVLELISRPLENCYSH 648
Query: 349 MD---PPTLVDLILEVVAANLCSSLEDVKTLIKHTLF-YQLKSPEDQQTFLETTLSEIVA 404
+ + L L ++ + ++L+D+ + T F Q K +++ E T+ +
Sbjct: 649 LVQEFTKGIQTLFLSLIGLKIATNLDDIYHFMCGTFFGVQQKILLKEKSLWEITVESL-- 706
Query: 405 SLLASKGTML--TMNEAGH-----LSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCL 457
L KG + T++++ ++T + +A+ + + C I+Y DL L
Sbjct: 707 KYLTEKGLLQKDTIDKSKEEIQCSFNITKLGRASFKGTIDLAYCDILYRDLKKGLEGLVL 766
Query: 458 LNSLHMLFLVIPLEYRIPSDGILLSRSKVYDR-YTKFHPQTLRVAEALGVTENLVALNVT 516
+ LH+++L P Y + S + +Y R +++ P VA LGV+EN + +
Sbjct: 767 ESLLHLIYLTTP--YDMASQCV--PDWMIYFRQFSQLSPAEQNVAALLGVSENFIGKKAS 822
Query: 517 GKLKDEK--KALLCRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVY 574
G+ +K K ++ R + + +LY +L N V++ + + ++Q+ L + F+S V
Sbjct: 823 GQAIKKKVDKDIVNRLYLSFVLYTLLKETNIWSVSEKFNMPRGYIQSLLTGAASFSSCVL 882
Query: 575 RFCEELPELWCYKQLLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIA 634
FCEEL E W Y+ LL +L + L YC L LM++ GV GRARQL NAGY SL +A
Sbjct: 883 HFCEELDEFWVYRALLVELTKKLTYCVKAELIPLMEVTGVLEGRARQLYNAGYKSLMHLA 942
Query: 635 RADAKEMVAKIRHLPLRSARNLISAAKLHFITKMDKVEAMKNLIQNL 681
A+ + ++ I HL R A+ ++S+AK+ +K EA++ ++ L
Sbjct: 943 NANPEVLIRTIDHLSRRQAKQIVSSAKMLL---HEKAEALQEEVEEL 986
>gi|449499812|ref|XP_004176332.1| PREDICTED: LOW QUALITY PROTEIN: helicase POLQ-like [Taeniopygia
guttata]
Length = 1050
Score = 387 bits (994), Expect = e-104, Method: Compositional matrix adjust.
Identities = 245/712 (34%), Positives = 387/712 (54%), Gaps = 49/712 (6%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V EK + L+ E F +EEYAG KG++PP KR++ KKS+YI TIEKG L+ SLI+
Sbjct: 350 IVQEKVRGLSSFGIELGFLVEEYAGSKGRFPPIKRRV-KKSLYIATIEKGHALVNSLIET 408
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIE 120
RI ++GL+V+DE HML RG +LE ++K Y K QI MSAT+ N+ L F++
Sbjct: 409 ERICDLGLVVVDELHMLGAGSRGAVLEXTLAKNFYTSKKTQIIGMSATLNNVGDLQKFLQ 468
Query: 121 GITYVENSRPTKHSEYVTVDKRVF----QSFDGKSLTEIYADNLDYSLTGSGPDAVLHLV 176
Y N RP + EY+ + ++ ++ +G + + + +L + PD ++ LV
Sbjct: 469 AEYYTNNFRPVELKEYIKIRDTIYAVDSKTQNGFAFSRLLNFKYSSNLEKADPDHIIALV 528
Query: 177 Q---GNLMVLIFCSSKIACSNLA------LRLQFDRFPGTKEYKKQEKEDLIEALKEEND 227
LIFC +K C N+A L+ +F + +K++EK+DLI+ LK +
Sbjct: 529 TEVIPKYSCLIFCPTKKNCENVASMVCKYLKKEF------RAHKEKEKQDLIKNLKSIGN 582
Query: 228 GKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVI 287
G + L++ I +G+AYHH+ LT ER+ IEEAY AG L ++ CT+TLAAGVNLPA+RVI
Sbjct: 583 GTVCPVLKQTIPFGIAYHHSGLTNDERKAIEEAYSAGILCLLACTATLAAGVNLPARRVI 642
Query: 288 IRDSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISS 347
+R YVG DF+ + YKQM GRAGR G+ +GESI++ + L ++++ E S
Sbjct: 643 LRAPYVGNDFLKKSQYKQMTGRAGRAGIDSAGESILIVQEKDKHL-VQDLVHSPLENCYS 701
Query: 348 HM---DPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQLKSPEDQQTFLETTLSEIV- 403
++ + L+L +V + + ++V + TL + Q E + SEI+
Sbjct: 702 NLLLELTKGIQSLLLSLVGLKIAVTHKEVDNFMCCTLL----GVQQQLLSKEKSFSEIIK 757
Query: 404 --------ASLLASKGTMLTMNEAGHLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNF 455
LL + + N L++T + KA + + C I+Y +L
Sbjct: 758 DGLENLIEKGLLKGRISEKDHNSKSTLTITPLGKATYKGSIDLAYCNILYRELKKGLEGL 817
Query: 456 CLLNSLHMLFLVIP--LEYRIPSDGILLSRSKVYDRYTKFHPQTLRVAEALGVTENLVAL 513
L +SLH+L+L P + D ++ R ++ + +VA+ +GV E+ +
Sbjct: 818 VLESSLHLLYLSTPYDMTSTCSPDWMIYLR-----QFHQLSAAEQKVADIVGVPESFITK 872
Query: 514 NVTGKL--KDEKKALLCRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFAS 571
+G+ K+ A++ RF+ +LY +L N V++ + + ++QN LN + FAS
Sbjct: 873 MASGQTIRKNVDHAVVNRFYLTFVLYTLLKETNIWSVSEKFNLSRGYVQNLLNSAASFAS 932
Query: 572 KVYRFCEELPELWCYKQLLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLE 631
+ FCEEL E W YK LLT+L + L YC L LM++ GV RA+QL NAGY +L
Sbjct: 933 CLLHFCEELEEFWVYKALLTELTKQLTYCVKTELIPLMEVAGVLEARAKQLYNAGYKTLA 992
Query: 632 LIARADAKEMVAKIRHLPLRSARNLISAAKLHFITKMDKVEAMKNLIQNLQK 683
+A A+ + +V I HL R A+ +IS+AK+ +K EA++ ++ L K
Sbjct: 993 HLAYANPETLVRMIEHLSRRQAKQIISSAKMLL---SEKAEALQEEVEELLK 1041
>gi|395542204|ref|XP_003773024.1| PREDICTED: helicase POLQ-like [Sarcophilus harrisii]
Length = 1047
Score = 387 bits (994), Expect = e-104, Method: Compositional matrix adjust.
Identities = 237/714 (33%), Positives = 392/714 (54%), Gaps = 34/714 (4%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V EK SL+ E F++EEYAG KG+ PP KR+ KKS+YI TIEKG L+ SLI+E
Sbjct: 335 IVQEKISSLSNFGIELGFFVEEYAGSKGRVPPIKRR-GKKSLYIATIEKGHGLVNSLIEE 393
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIE 120
RI+E+GL+V+DE HM+ E RG ILE ++K+LY K+ QI MSAT+ N+ L F+
Sbjct: 394 GRINELGLVVVDELHMIGEGSRGAILEITLAKILYTSKTTQIIGMSATLNNVEELQEFLN 453
Query: 121 GITYVENSRPTKHSEYVTVDKRVFQ----SFDGKSLTEIYADNLDYSLTGSGPDAVLHLV 176
Y RP + EY+ ++ +++ + G + + + L PD ++ LV
Sbjct: 454 AEYYTSKFRPVELKEYLKINDTIYEVDIKAEKGYTFSRLLKCKYSDHLKKMDPDHLVALV 513
Query: 177 Q---GNLMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKE--DLIEALKEENDGKLS 231
N L+FC +K C N+A + +F K +EKE D ++ LK ++G L
Sbjct: 514 TEVIPNYSCLVFCPTKKNCENVADMIC--KFLNKDYLKHREKEKCDFLKNLKNVSNGSLC 571
Query: 232 TNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS 291
L+ + +G+AYHH+ LT+ ER+++EEAY G L ++ CTSTLAAGVNLPA+RVI+R
Sbjct: 572 PVLKRTVPFGIAYHHSGLTSDERKVLEEAYATGVLCLLTCTSTLAAGVNLPARRVILRAP 631
Query: 292 YVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMD- 350
Y+ F+ N Y+QM+GRAGR G+ GESI++ + L +++N+ E SH+
Sbjct: 632 YIATQFLKRNQYQQMIGRAGRAGIDTVGESILILQEKDKHLVL-NLVNSPLENCYSHLGQ 690
Query: 351 --PPTLVDLILEVVAANLCSSLEDVKTLIKHTLF-YQLKSPEDQQTFLE---TTLSEIVA 404
+ L+L ++ + +LE + + T F Q K ++++ E L+ ++
Sbjct: 691 EITKGIQSLLLSLIGLKIAKNLEGIYHFMCATFFGIQQKRLSEEKSLWEICRKALASLME 750
Query: 405 SLLASKGTMLTMNEAGH--LSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLH 462
L K ++ E L +T + +A+++ L C +Y DL L + LH
Sbjct: 751 KGLLQKRSVCKNEEESQCELQITKLGQASLKGTLDLAYCGTLYKDLKKGLEGLVLESYLH 810
Query: 463 MLFLVIPLEY--RIPSDGILLSRSKVYDRYTKFHPQTLRVAEALGVTENLVALNVTGKL- 519
+++L P + + D ++ R ++ + +VA +GV+E+ + +G+
Sbjct: 811 LIYLTTPYDMVSQCRPDWMIYLR-----QFDHLNSGEQKVAAIVGVSESFITKKASGQAI 865
Query: 520 -KDEKKALLCRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCE 578
KD + ++ R + + +L+ +L N +V++ + + ++QN LN + F S V FCE
Sbjct: 866 KKDVDRNIVNRLYLSLVLFTLLKETNVWRVSEKFNMSRGYVQNLLNGAASFCSCVLHFCE 925
Query: 579 ELPELWCYKQLLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIARADA 638
EL E W Y+ LLT+L + L YC +L LM++ GV RA+QL +AGY ++ +A AD
Sbjct: 926 ELEEFWVYRALLTELTKKLSYCVKADLVPLMEITGVLESRAKQLYDAGYKTVTHLANADP 985
Query: 639 KEMVAKIRHLPLRSARNLISAAKLHFITKMDKVEAMKNLIQNLQKNYDNIVHNT 692
+ ++ I HL R A+ ++S+AK+ +K EA++ +++L + +I T
Sbjct: 986 EVLIRTINHLSRRQAKQIVSSAKMLL---NEKAEALQEEVEDLLRPPSDIPGTT 1036
>gi|301753319|ref|XP_002912509.1| PREDICTED: LOW QUALITY PROTEIN: helicase POLQ-like [Ailuropoda
melanoleuca]
Length = 1105
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 248/707 (35%), Positives = 394/707 (55%), Gaps = 42/707 (5%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V EK L+ E F++EEYAG KG++PP KR+ KKS+YI TIEKG L+ SLI+
Sbjct: 397 IVQEKISGLSSFGIELGFFVEEYAGSKGKFPPIKRR-EKKSLYIATIEKGHSLVNSLIET 455
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIE 120
RI +GL+V+DE HM+ E RG ILE ++K+LY K+ QI MSAT+ N+ L F++
Sbjct: 456 GRIGSLGLVVVDELHMIGEGSRGAILEMTLAKILYTSKATQIIGMSATLNNVEDLQEFLQ 515
Query: 121 GITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNL---DYS--LTGSGPDAVLHL 175
Y RP + EY+ ++ +++ D K+ + L YS L PD ++ L
Sbjct: 516 AEYYTSQFRPVELKEYLKINDAIYE-VDSKAENSMTFSRLLGCQYSDTLKKMDPDHLVAL 574
Query: 176 VQ---GNLMVLIFCSSKIACSNLA-LRLQFDRFPGTKEY---KKQEKEDLIEALKEENDG 228
V N L+FC +K C N+A + +F +KEY +++EK ++I+ LK + G
Sbjct: 575 VTEVIPNYSCLVFCPTKKNCENVAEMICKF----LSKEYLKHREKEKHEVIKNLKNISSG 630
Query: 229 KLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVII 288
L L+ I +GVAYHH+ LT+ ER+L+EEAY G L + CTSTLAAGVNLPA+RVI+
Sbjct: 631 NLCPVLKRTIPFGVAYHHSGLTSDERKLLEEAYSKGVLCLFTCTSTLAAGVNLPARRVIL 690
Query: 289 RDSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSH 348
R YV ++F+ N YKQM+GRAGR G+ GESI++ + +D + +++ E SH
Sbjct: 691 RAPYVAKEFLKRNQYKQMIGRAGRAGIDSIGESILILQE-KDKQQVLELISRPLENCYSH 749
Query: 349 MD---PPTLVDLILEVVAANLCSSLEDVKTLIKHTLF-YQLKSPEDQQTFLETTLSEIVA 404
+ + L L ++ + ++L+D+ + T F Q K +++ E T+ +
Sbjct: 750 LVQEFTKGIQTLFLSLIGLKIATNLDDIYHFMCGTFFGVQQKILLKEKSLWEITVESL-- 807
Query: 405 SLLASKGTML--TMNEAGH-----LSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCL 457
L KG + T++++ ++T + +A+ + + C I+Y DL L
Sbjct: 808 KYLTEKGLLQKDTIDKSKEEIQCSFNITKLGRASFKGTIDLAYCDILYRDLKKGLEGLVL 867
Query: 458 LNSLHMLFLVIPLEYRIPSDGILLSRSKVYDR-YTKFHPQTLRVAEALGVTENLVALNVT 516
+ LH+++L P Y + S + +Y R +++ P VA LGV+EN + +
Sbjct: 868 ESLLHLIYLTTP--YDMASQCV--PDWMIYFRQFSQLSPAEQNVAALLGVSENFIGKKAS 923
Query: 517 GKLKDEK--KALLCRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVY 574
G+ +K K ++ R + + +LY +L N V++ + + ++Q+ L + F+S V
Sbjct: 924 GQAIKKKVDKDIVNRLYLSFVLYTLLKETNIWSVSEKFNMPRGYIQSLLTGAASFSSCVL 983
Query: 575 RFCEELPELWCYKQLLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIA 634
FCEEL E W Y+ LL +L + L YC L LM++ GV GRARQL NAGY SL +A
Sbjct: 984 HFCEELDEFWVYRALLVELTKKLTYCVKAELIPLMEVTGVLEGRARQLYNAGYKSLMHLA 1043
Query: 635 RADAKEMVAKIRHLPLRSARNLISAAKLHFITKMDKVEAMKNLIQNL 681
A+ + ++ I HL R A+ ++S+AK+ +K EA++ ++ L
Sbjct: 1044 NANPEVLIRTIDHLSRRQAKQIVSSAKMLL---HEKAEALQEEVEEL 1087
>gi|297673894|ref|XP_002814981.1| PREDICTED: LOW QUALITY PROTEIN: helicase POLQ-like [Pongo abelii]
Length = 1100
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 245/705 (34%), Positives = 389/705 (55%), Gaps = 38/705 (5%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V EK L+ E F++EEYAG KG++PPTKR+ KKS+YI TIEKG L+ SLI+
Sbjct: 392 IVQEKISGLSSFGIELGFFVEEYAGSKGRFPPTKRR-EKKSLYIATIEKGHSLVNSLIET 450
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIE 120
RI +GL+V+DE HM+ E RG LE ++K+LY K+ QI MSAT+ N+ L F++
Sbjct: 451 GRIGSLGLVVVDELHMIGEGSRGATLEMTLAKILYTSKTTQIIGMSATLNNVEDLQKFLQ 510
Query: 121 GITYVENSRPTKHSEYVTVDKRVFQ----SFDGKSLTEIYADNLDYSLTGSGPDAVLHLV 176
Y RP + EY+ ++ +++ + +G + + + +L PD ++ LV
Sbjct: 511 AEYYTSQFRPVELKEYLKINDTIYEVDSKAENGMTFSRLLNYKYSDTLKKMDPDHLVALV 570
Query: 177 Q---GNLMVLIFCSSKIACSNLA-LRLQFDRFPGTKEY---KKQEKEDLIEALKEENDGK 229
N L+FC SK C N+A + +F +KEY K++EK ++I+ LK +G
Sbjct: 571 TEVIPNYSCLVFCPSKKNCENVAEMICKF----LSKEYLKHKEKEKCEVIKNLKNIGNGN 626
Query: 230 LSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIR 289
L L+ I +GVAYHH+ LT+ ER+L+EEAY G L + CTSTLAAGVNLPA+RVI+R
Sbjct: 627 LCPVLKRTIPFGVAYHHSGLTSDERKLLEEAYSTGVLCLFTCTSTLAAGVNLPARRVILR 686
Query: 290 DSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHM 349
YV ++F+ N YKQM+GRAGR G+ GESI++ + +D + ++ E SH+
Sbjct: 687 APYVAKEFLKRNQYKQMIGRAGRAGIDTIGESILILQE-KDKQQVLELITKPLENCYSHL 745
Query: 350 D---PPTLVDLILEVVAANLCSSLEDVKTLIKHTLF-YQLKSPEDQQTFLETT---LSEI 402
+ L L ++ + ++L+D+ + T F Q K +++ E T L +
Sbjct: 746 VQEFTKGIQTLFLSLIGLKIATNLDDIYHFMNGTFFGVQQKILLKEKSLWEITVESLRYL 805
Query: 403 VASLLASKGTMLTMNEAG--HLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNS 460
L K T+ E + +T + +A+ + + C I+Y DL L +
Sbjct: 806 TEKGLLQKDTIYKSEEEVQYNFHITKLGRASFKGTIDLAYCDILYRDLKKGLEGLVLESL 865
Query: 461 LHMLFLVIP--LEYRIPSDGILLSRSKVYDRYTKFHPQTLRVAEALGVTENLVALNVTGK 518
LH+++L P L + D ++ R ++++ P VA LGV+E+ + +G+
Sbjct: 866 LHLIYLTTPYDLVSQCNPDWMIYFR-----QFSQLSPAEQNVAAILGVSESFIGKKASGQ 920
Query: 519 LKDEK--KALLCRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRF 576
+K K ++ R + + +LY +L N V++ + + ++QN L + F+S V F
Sbjct: 921 AIRKKVDKDIVNRLYLSFVLYTLLKETNIWTVSEKFNMPRGYIQNLLTGAASFSSCVLHF 980
Query: 577 CEELPELWCYKQLLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIARA 636
CEEL E W Y+ LL +L + L YC L LM++ GV GRA+QL +AGY SL +A A
Sbjct: 981 CEELEEFWVYRALLVELTKKLTYCVKAELIPLMEVTGVLEGRAKQLYSAGYKSLMHLANA 1040
Query: 637 DAKEMVAKIRHLPLRSARNLISAAKLHFITKMDKVEAMKNLIQNL 681
+ + +V I HL R A+ ++S+AK+ +K EA++ ++ L
Sbjct: 1041 NPEVLVRTIDHLSRRQAKRIVSSAKMLL---HEKAEALQEEVEEL 1082
>gi|338723392|ref|XP_001494572.3| PREDICTED: LOW QUALITY PROTEIN: helicase POLQ-like [Equus caballus]
Length = 1123
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 239/714 (33%), Positives = 390/714 (54%), Gaps = 44/714 (6%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V EK L+ E F++EEYAG KG++PP KR+ KKS+YI TIEKG L+ SLI+
Sbjct: 400 IVQEKISGLSSFGVELGFFVEEYAGSKGRFPPIKRR-EKKSLYIATIEKGHSLVNSLIET 458
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIE 120
RI +GL+V+DE HM+ E RG ILE ++K+LY K+ QI MSAT+ N+ L F++
Sbjct: 459 GRIGSLGLVVVDELHMIGEGSRGAILEMTLAKILYTSKTTQIIGMSATLSNVEDLQEFLQ 518
Query: 121 GITYVENSRPTKHSEYVTVDKRVFQ----SFDGKSLTEIYADNLDYSLTGSGPDAVLHLV 176
Y RP + EY+ ++ +++ + +G + + + +L PD ++ LV
Sbjct: 519 AEYYTSQFRPVELKEYLKINDAIYEVDSKAENGMTFSRVLGYKYSDTLKKMDPDHLVALV 578
Query: 177 Q---GNLMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTN 233
N L+FC +K C N+A + +++++EK+++I+ LK + G L
Sbjct: 579 TEVIPNYSCLVFCPTKKNCENVAEMICKILSKDCLKHREKEKQEVIQNLKNLSGGSLCPV 638
Query: 234 LEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYV 293
L+ I +GVAYHH+ LT+ ER+L+EEAY G L + CTSTLAAGVNLPA+RVI+R YV
Sbjct: 639 LKRTIPFGVAYHHSGLTSEERKLLEEAYSTGVLCLFTCTSTLAAGVNLPARRVILRAPYV 698
Query: 294 GRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMD--- 350
++F+ N YKQM+GRAGR G+ +GESI++ + +D + +++ E SH+
Sbjct: 699 AKEFLKRNQYKQMIGRAGRAGIDSTGESILILQE-KDKQKVLELISRPLENCYSHLVQEF 757
Query: 351 PPTLVDLILEVVAANLCSSLEDVKTLIKHTLF-YQLKSPEDQQTFLETT---LSEIVASL 406
+ L L ++ + ++L+D+ + T F Q K ++T + T L +
Sbjct: 758 TKGIQTLFLSLIGLKIATNLDDIYHFMSGTFFGVQQKILLKEKTLWDITVDSLRYLTEKG 817
Query: 407 LASKGTMLTMNEAGHL----------------SLTSIAKAAVQAGLSHDVCLIIYSDLLH 450
L K T+LT E G L +T++ +A+ + + C ++Y DL
Sbjct: 818 LLQKDTILT--EKGLLQKDTICKSEEEFQYSFQITNLGRASFKGTIDLAYCDVLYRDLKK 875
Query: 451 NKLNFCLLNSLHMLFLVIPLEYRIPSDGILLSRSKVYDR-YTKFHPQTLRVAEALGVTEN 509
L + LH+++L P + D + +Y R +++ P VA +GV+EN
Sbjct: 876 GLEGLVLESLLHLIYLTTPYDMASQCDPDWM----IYFRQFSQLSPAEQNVAALVGVSEN 931
Query: 510 LVALNVTGKLKDEK--KALLCRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTS 567
+ +G+ +K K ++ R + + +L+ +L N V++ + + ++QN L +
Sbjct: 932 FLGKKASGQAIKKKVDKGIVNRLYLSFVLFTLLKETNIWSVSEKFNMPRGYVQNLLTAAA 991
Query: 568 YFASKVYRFCEELPELWCYKQLLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGY 627
F+S V FCEEL E W Y+ LL +L + L YC L LM++ GV RA+QL +AGY
Sbjct: 992 SFSSCVLHFCEELEEFWVYRVLLVELTKKLTYCVKAELIPLMEVTGVLEARAKQLYSAGY 1051
Query: 628 SSLELIARADAKEMVAKIRHLPLRSARNLISAAKLHFITKMDKVEAMKNLIQNL 681
SL +A A+ + ++ I HL R A+ ++S+AK+ +K EA++ ++ L
Sbjct: 1052 KSLMHLANANPEVLIRTIDHLSRRQAKQIVSSAKMLL---HEKAEALREEVEEL 1102
>gi|351697255|gb|EHB00174.1| Helicase POLQ-like protein [Heterocephalus glaber]
Length = 1060
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 246/706 (34%), Positives = 382/706 (54%), Gaps = 40/706 (5%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V EK L+ E F++EEYAG KG++PPTKR+ KKSIYI TIEK L+ SLI+
Sbjct: 358 IVQEKISGLSSFGIELGFFVEEYAGSKGKFPPTKRR-EKKSIYIATIEKAHSLVNSLIET 416
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIE 120
RI +GL+V+DE HM+ E RG ILE ++K+LY K+ QI MSAT+ N+ L F++
Sbjct: 417 GRISSLGLVVVDELHMIGEGSRGAILEMTLAKILYTSKTTQIIGMSATLNNVQDLQEFLQ 476
Query: 121 GITYVENSRPTKHSEYVTVDKRVF----QSFDGKSLTEIYADNLDYSLTGSGPDAVLHLV 176
Y RP + EY+ ++ ++ ++ G + + + SL PD ++ LV
Sbjct: 477 AEYYSNQFRPVELKEYLKINHTIYAVDSKAESGMTFSRLLHYKYSDSLKKMDPDHLVALV 536
Query: 177 Q---GNLMVLIFCSSKIACSNLALRL-QFDRFPGTKEY---KKQEKEDLIEALKEENDGK 229
N L+FC SK C N+A L +F + KEY K++EK +LI L+ + G
Sbjct: 537 TEVIPNYSCLVFCPSKKNCENVAEMLCKFLK----KEYLKHKEKEKCELINNLRSISGGH 592
Query: 230 LSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIR 289
L L+ + +GVAYHH+ LT+ ER+L+EEAY G L + CTSTLA G+NLPA+RVI+R
Sbjct: 593 LCPVLKRTVPFGVAYHHSGLTSEERKLLEEAYSTGVLCLFACTSTLATGINLPARRVILR 652
Query: 290 DSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHM 349
YV ++F+ + YKQM+GRAGR G+ GESI++ + +D + +++ PE SH+
Sbjct: 653 APYVAKEFLKRSQYKQMIGRAGRAGIDTIGESILILQE-KDKQKVLELISRPPENCYSHL 711
Query: 350 DP---PTLVDLILEVVAANLCSSLEDVKTLIKHTLF-YQLKSPEDQQTFLETTLSEIVAS 405
+ L L ++ + ++L D+ + T F Q K +++ + T+ +
Sbjct: 712 VQEFNKGIQTLFLSLIGLKIATNLGDIYRFMNGTFFGVQQKILLKEKSLWKITVESL--R 769
Query: 406 LLASKGTMLTM-----NEAGH--LSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLL 458
L KG + E H +T + KA+ + + C I+Y DL L
Sbjct: 770 YLTEKGLLQKCPNPESEEELHCNFHITKLGKASFKGTIDLAYCDILYRDLKKGLEGLVLE 829
Query: 459 NSLHMLFLVIPLEYRIPSDGILLSRSKVYDRY-TKFHPQTLRVAEALGVTENLVALNVTG 517
N LH+++L P + D + +Y R ++ P VA LGV+E+ +A +G
Sbjct: 830 NLLHLIYLTTPYDLVSQCDPDWM----IYFRQISQLSPAEQNVASLLGVSESYIAKKASG 885
Query: 518 KLKDEK--KALLCRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYR 575
+ +K K + R + + +L+ +L N V++ + + +QN L + F+S V
Sbjct: 886 QATRKKVDKDTVNRLYLSFVLHALLKETNVWNVSEKFNLPRGSIQNLLTAAASFSSSVLH 945
Query: 576 FCEELPELWCYKQLLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIAR 635
FCEEL E W Y+ LL +L + L YC L LM++ GV GRA+QL + GY SL +A
Sbjct: 946 FCEELEEFWVYRALLVELTKKLTYCVKAELIPLMEVTGVLEGRAKQLYSTGYRSLMHLAN 1005
Query: 636 ADAKEMVAKIRHLPLRSARNLISAAKLHFITKMDKVEAMKNLIQNL 681
AD ++ I HL R AR ++S+AK+ +K EA++ ++ L
Sbjct: 1006 ADPDVLIKTIDHLSRRQARQIVSSAKMLL---QEKAEALQEEVEEL 1048
>gi|307195274|gb|EFN77230.1| ATP-dependent DNA helicase HEL308 [Harpegnathos saltator]
Length = 1054
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 265/734 (36%), Positives = 395/734 (53%), Gaps = 67/734 (9%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V EK QS+A A + F +EEYA KG YPPTKR+ K SIYICTIEK L+ SLI+
Sbjct: 321 LVQEKVQSMAILALKLGFLVEEYASTKGCYPPTKRR-RKNSIYICTIEKALGLVNSLIEM 379
Query: 61 NRIDEIGLIVIDEFHMLNEPQ-RGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFI 119
R+ EIG+IV+DE H+L E RG LE +++K+++ I++ MSATIGN+ ++ F+
Sbjct: 380 KRLAEIGIIVVDELHLLGESGGRGATLEGLLTKIMFFDDMIRLIGMSATIGNLKEIAQFL 439
Query: 120 EGITYVENSRPTKHSEYVTVDKRVFQ-SFDGKSL-TEIYADNLDY--SLTGSGPDAVLHL 175
TY +N RP K +EYV + +++ +F+ + L EI ++ Y + PD + +L
Sbjct: 440 NADTYSQNFRPVKITEYVKCENCMWKVNFNNEELLVEISNNDYKYPDDIAVLDPDRIGNL 499
Query: 176 VQ---GNLMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLST 232
V N LIFCSS+ C NLAL L YK EK L+ LK E L
Sbjct: 500 VMEVAPNDSCLIFCSSRKNCENLALLLTKVLPRSLGNYKVMEKRTLLNILKTEEG--LCE 557
Query: 233 NLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSY 292
L + + +GVAYHH+ LT+ ERRL+E A+ G L +ICCTSTLAAGVNLPA+RVI+R Y
Sbjct: 558 ILRKTLPFGVAYHHSGLTSEERRLLENAFKEGVLCVICCTSTLAAGVNLPARRVILRSPY 617
Query: 293 VGRDFISLNMYKQMVGRAGRTGLQESGESIMLCK-----TMQDFLRFSSMMNAGPEPISS 347
VG F++L+ YKQM+GRAGR G+ GESI++CK ++D L +S M+ +
Sbjct: 618 VGNQFLNLSRYKQMIGRAGRAGMGVLGESILICKKPEISKVKDLL--TSQMDDSLSSLHV 675
Query: 348 HMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLF--------YQLKSPEDQ-------- 391
D + +LIL + N+ ++ ++ L+ TL +KS D+
Sbjct: 676 END-RGINNLILSAIQLNMATTRYELHKLMDITLLGIQQNRLDVNVKSITDETITALLKC 734
Query: 392 ----------------QTFLETTLSEIVASLLASKGTM--LTMNEAGHLSLTSIAKAAVQ 433
+ + S + L +SK + +T L + +AA++
Sbjct: 735 GVIKIKNKDKISNPNVTVVIPSQESTDIEKLKSSKKEVKTVTFTSETKFQLCDLGQAAMK 794
Query: 434 AG---LSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEYRIPSDGILLSRSKVYDRY 490
+ +Y DL + + L+++LH+L+LV P Y + S I + YD
Sbjct: 795 GKNGPIDLKTAYKLYEDLKTAQKHLILIDNLHLLYLVTP--YDVVSQ-ITPVGNIYYDVI 851
Query: 491 TKFHPQTLRVAEALGVTE---NLVALNVTGKLKDEKKALLCRFFHACILYDVLNFDNHQK 547
++VA LG+TE N + +T K +K ++ RF+ I++++ N +
Sbjct: 852 MTLTDSQMQVARLLGITEATANKIRDGITP--KSVEKRVVERFYVTLIIHELWNHHSVYF 909
Query: 548 VAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELWCYKQLLTDLPQTLMYCRAPNLRA 607
VA+ Y + +QN LN S FAS RFC+EL E W + ++L + L YC L
Sbjct: 910 VAQKYQVNRGVVQNLLNTVSMFASSTVRFCQELSEFWAFTEMLGTFSKKLSYCCPSELET 969
Query: 608 LMDLPGVKIGRARQLLNAGYSSLELIARADAKEMVAKIRHLPLRSARNLISAAKLHFITK 667
LM+LP VKIGRARQL AGY SL+ IA+AD+K + +I +L + +I+AAKL
Sbjct: 970 LMELPSVKIGRARQLYKAGYKSLQSIAKADSKVLQEQIPYLSNKIVAQIIAAAKLLI--- 1026
Query: 668 MDKVEAMKNLIQNL 681
+ K E +K+ +N+
Sbjct: 1027 LQKAEDLKDECENV 1040
>gi|332028729|gb|EGI68760.1| Helicase POLQ-like protein [Acromyrmex echinatior]
Length = 1043
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 259/718 (36%), Positives = 382/718 (53%), Gaps = 59/718 (8%)
Query: 4 EKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRI 63
E QS+A A + F +EEYA KG+YPP KR+ K S+YICTIEK LI SLI+ R+
Sbjct: 317 EIVQSMAILALKLGFLIEEYASTKGRYPPIKRR-RKNSLYICTIEKALGLINSLIETKRL 375
Query: 64 DEIGLIVIDEFHMLNEPQ-RGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGI 122
EIG+IV+DE H+L E RG LE +++KV++ I++ MSATIGN+ ++ F+
Sbjct: 376 TEIGIIVVDELHLLGESGGRGATLEGLLTKVMFFSDIIRLIGMSATIGNLKEIAQFLNAD 435
Query: 123 TYVENSRPTKHSEYVTV--DKRVFQSFDGKSLTEIYADNLDYS--LTGSGPDAVLHLVQ- 177
TY +N RP K +EYV D V + + L ++ ++ YS + PD + L+
Sbjct: 436 TYSQNFRPVKITEYVKCENDMWVVNLNNEELLVDMSTNDYKYSDDVAILDPDRIGGLIME 495
Query: 178 --GNLMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLE 235
N LIFCSS+ C NLAL L YK EK L+ ALK E L L+
Sbjct: 496 VVPNDSCLIFCSSRKNCENLALLLAKILSKDLYNYKVNEKMTLLNALKTEEG--LCPILQ 553
Query: 236 ECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGR 295
+ I G+AYHH+ LT+ ERRLIE+A+ TL +ICCTSTLAAGVNLPA+RVI+R YVG
Sbjct: 554 KTIKLGIAYHHSGLTSEERRLIEDAFRESTLCVICCTSTLAAGVNLPARRVILRSPYVGN 613
Query: 296 DFISLNMYKQMVGRAGRTGLQESGESIMLCK-----TMQDFL------RFSSM------- 337
F++L+ YKQM+GRAGR G+ GESI++CK ++D L SS+
Sbjct: 614 QFLNLSRYKQMIGRAGRAGMGVLGESILICKKFEINKVKDLLISQMDDSLSSLYIENNNG 673
Query: 338 ----------MNAGPEPISSH-MDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQLK 386
+N H + TL+ + + NL + ++ T + ++K
Sbjct: 674 LNNLILSAIQLNIASTRSELHKLTTATLLSIQQNRIGVNLKTITDETITALLKCSIIKVK 733
Query: 387 SPEDQQTFLETTL------SEIVASLLASKGT-MLTMNEAGHLSLTSIAKAAVQAGLSHD 439
S + T+ S +L KG +T L + +AA++ +
Sbjct: 734 SKDSNTGNPNVTIVIPSQASTCKKNLSVKKGVKTVTFTSETEFQLCDLGQAALKGPIDLK 793
Query: 440 VCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLE--YRIPSDGILLSRSKVYDRYTKFHPQT 497
+Y DL + + L+++LH+L+LV P + +I G S YD +
Sbjct: 794 TAYTLYEDLKTAQKHLILIDNLHLLYLVTPYDSISQITPIG-----SIYYDVIMELTESQ 848
Query: 498 LRVAEALGVTE---NLVALNVTGKLKDEKKALLCRFFHACILYDVLNFDNHQKVAKMYGI 554
++VA LG+TE N + + K +++ A RF+ I++++ N VA+ Y +
Sbjct: 849 MQVARLLGITEAAANKIRDGIIPKFIEKRVAH--RFYVTLIVHELWNHHTVYSVAEKYQV 906
Query: 555 QNSHLQNFLNVTSYFASKVYRFCEELPELWCYKQLLTDLPQTLMYCRAPNLRALMDLPGV 614
+Q+ LN S FAS V RFC+ELPE W + ++L+ + L YC L LM+LP V
Sbjct: 907 NRGIIQSLLNAVSMFASSVVRFCQELPEFWAFTEMLSTFSKKLSYCCPLELEKLMELPSV 966
Query: 615 KIGRARQLLNAGYSSLELIARADAKEMVAKIRHLPLRSARNLISAAKLHFITKMDKVE 672
KIGRARQL AGY +L+ IA+AD KE+ I +L + +I+AAKL + + + ++
Sbjct: 967 KIGRARQLYKAGYKTLQSIAKADPKEIKKNIPYLSNKIVTQIIAAAKLLILQRAEDLK 1024
>gi|327273022|ref|XP_003221282.1| PREDICTED: helicase POLQ-like [Anolis carolinensis]
Length = 1120
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 249/708 (35%), Positives = 380/708 (53%), Gaps = 44/708 (6%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V EK ++ E F +EEYAG KG+ PP KR+ KKS+Y+ TIEKG L+ SLI+
Sbjct: 422 IVQEKVGGMSGFGMELGFLVEEYAGSKGRIPPIKRR-KKKSLYVATIEKGHSLVNSLIEA 480
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIE 120
+RI ++GL+V+DE HML E RG ILE +++K+LY K+ QI MSAT+ N+ L F++
Sbjct: 481 DRIGDLGLVVVDELHMLGEGNRGAILEMLLAKILYTSKTTQIIGMSATLSNVEDLQQFLK 540
Query: 121 GITYVENSRPTKHSEYVTVDKRVFQ----SFDGKSLTEIYADNLDYSLTGSGPDAVLHLV 176
Y RP + E+V + +++ + +G + + SL PD ++ LV
Sbjct: 541 ADYYTSTFRPVELKEFVKIKDSIYEVDSKAENGLTFCRLLEFKYSSSLQKVDPDHLIALV 600
Query: 177 Q---GNLMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTN 233
N L+FC +K C N+A + + K++EK DLI+ L +GKL
Sbjct: 601 TEVIPNYSCLVFCPTKKNCENVAEMICKHLNREYRHLKEKEKRDLIKDLTNICNGKLCPV 660
Query: 234 LEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYV 293
L+ I +G+AYHH+ LT+ ER+ IEEAY +G L ++ CTSTLAAGVNLPA+RVI+R YV
Sbjct: 661 LKRTIPFGIAYHHSGLTSDERKRIEEAYSSGILCLLTCTSTLAAGVNLPARRVILRAPYV 720
Query: 294 GRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDP-- 351
G +F+ N YKQMVGRAGR G+ ++GESI++ + L + N P+ S
Sbjct: 721 GTEFLKKNQYKQMVGRAGRAGIDKAGESILIAQEKDRHL----VQNLIYSPLESCYSKLL 776
Query: 352 ----PTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQLKSPEDQQTFLETTLSEIVASLL 407
+ L+L +V + ++ E+V + TLF S + Q E TL ++ +L
Sbjct: 777 IELNKGIRSLLLSLVGLKIANNPEEVYQFMLITLF----SVQPQLLPTEKTLRDVTTEVL 832
Query: 408 AS-KGTMLTMNEA---------GHLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCL 457
K L +A +L +T + +A + + C +Y+DL L
Sbjct: 833 EWLKDKALLKEKASCDGIQSFQSNLEITPLGQATYKGSVDLAHCNALYADLKKGLEGLIL 892
Query: 458 LNSLHMLFLVIPLEY--RIPSDGILLSRSKVYDRYTKFHPQTLRVAEALGVTENLVALNV 515
+ LH+L+L P E + D ++ + Y++ P VA+ +GV E+ +
Sbjct: 893 ESCLHLLYLTTPYEMTSQCTPDWMV-----YFKEYSQLSPVEQHVADLVGVPESFIMKKA 947
Query: 516 TGK--LKDEKKALLCRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKV 573
+G+ KD + R + + IL +L N +VA+ + + +Q LN S F+S V
Sbjct: 948 SGQGIKKDVDSKTVTRLYLSFILLSLLKETNIWRVAEKFNLSRGFIQTLLNSASSFSSSV 1007
Query: 574 YRFCEELPELWCYKQLLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELI 633
FCEEL E W YK LLT+L + L YC L LM++ GV RA+QL N+GY +L +
Sbjct: 1008 LHFCEELNEFWVYKALLTELTKKLSYCVKAELIPLMEVNGVLEARAKQLYNSGYKTLSQL 1067
Query: 634 ARADAKEMVAKIRHLPLRSARNLISAAKLHFITKMDKVEAMKNLIQNL 681
A AD + MV I HL + AR ++S+AK+ +K EA++ ++ L
Sbjct: 1068 ANADPEVMVKTIEHLSRKQARQIVSSAKMLLT---EKAEALQEEVEEL 1112
>gi|74002142|ref|XP_544959.2| PREDICTED: helicase, POLQ-like [Canis lupus familiaris]
Length = 1072
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 240/702 (34%), Positives = 388/702 (55%), Gaps = 32/702 (4%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V EK L+ E F++EEYAG KG++PP KR+ KKS+YI TIEKG+ L+ SLI+
Sbjct: 365 IVQEKISGLSSFGIELGFFVEEYAGSKGKFPPIKRR-GKKSLYIATIEKGNSLVNSLIET 423
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIE 120
RI +GL+V+DE HM+ E RG ILE ++KVLY K+ QI MSAT+ N+ L F++
Sbjct: 424 GRISSLGLVVVDELHMIGEGSRGAILEMTLAKVLYTSKTTQIIGMSATLTNVEDLQKFLQ 483
Query: 121 GITYVENSRPTKHSEYVTVDKRVFQ----SFDGKSLTEIYADNLDYSLTGSGPDAVLHL- 175
Y RP + EY+ ++ +++ + +G + + + +L PD ++ L
Sbjct: 484 AEYYTSQFRPVELKEYLKINDAIYEVDSKAENGMTFSRLLNCQYSDTLKKMDPDHLVALA 543
Query: 176 --VQGNLMVLIFCSSKIACSNLALRLQFDRFPGTK--EYKKQEKEDLIEALKEENDGKLS 231
V N L+FC +K C N+A + RF + +++++EK ++I+ LK + G L
Sbjct: 544 TEVIPNHSCLVFCPTKKNCENVAEMIC--RFLSKQYLKHREKEKHEVIKNLKNISSGNLC 601
Query: 232 TNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS 291
L+ I +GVAYHH+ LT+ ER+L+EEAY G L + CTSTLAAGVNLPA+RVI+R
Sbjct: 602 PILKRTIPFGVAYHHSGLTSDERKLLEEAYSTGVLCLFTCTSTLAAGVNLPARRVILRAP 661
Query: 292 YVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMD- 350
YV ++F+ N YKQM+GRAGR G+ GESI++ + +D + +++ E SH+
Sbjct: 662 YVAKEFLKRNQYKQMIGRAGRAGIDSIGESILILQE-KDKQQVLELISRPLENCYSHLVQ 720
Query: 351 --PPTLVDLILEVVAANLCSSLEDVKTLIKHTLF-YQLKSPEDQQTFLETTLSE---IVA 404
+ L L ++ + ++L+D+ + T F Q K +++ + T+ +
Sbjct: 721 EFTKGIQTLFLSLIGLKIATNLDDIYHFMCGTFFGVQQKILLQEKSLWDITIESLRYLTE 780
Query: 405 SLLASKGTMLTMNEAGHLS--LTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLH 462
L K T+ E S +T + +A+ + + C I+Y DL L + LH
Sbjct: 781 KGLLQKDTIDKPKEEIQYSFHITKLGRASFKGTIDLAYCNILYRDLKKGLEGLVLESLLH 840
Query: 463 MLFLVIPLEYRIPSDGILLSRSKVYDR-YTKFHPQTLRVAEALGVTENLVALNVTGKLKD 521
+++L P + D + +Y R +++ P VA LGV+EN + +G+
Sbjct: 841 LIYLTTPYDMASCCDPDWM----IYFRQFSQLSPAEQNVAALLGVSENFIGKKASGQPIK 896
Query: 522 EK--KALLCRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEE 579
+K K ++ R + + +LY +L N V++ + + ++Q+ L + F+S V FCEE
Sbjct: 897 KKVDKDIVNRLYLSFVLYTLLKETNIWSVSEKFNMPRGYIQSLLTGAASFSSCVLHFCEE 956
Query: 580 LPELWCYKQLLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIARADAK 639
L E W Y+ LL +L + L YC L LM++ GV GRA+QL NAGY SL +A A+ +
Sbjct: 957 LEEFWVYRALLVELTKKLTYCVKAELIPLMEVTGVLEGRAKQLYNAGYKSLTHLANANPE 1016
Query: 640 EMVAKIRHLPLRSARNLISAAKLHFITKMDKVEAMKNLIQNL 681
++ I HL A+ ++S+AK+ +K EA++ ++ L
Sbjct: 1017 VLIRTIDHLSRHQAKQMVSSAKMLL---HEKAEALQEEVEEL 1055
>gi|194865309|ref|XP_001971365.1| GG14474 [Drosophila erecta]
gi|190653148|gb|EDV50391.1| GG14474 [Drosophila erecta]
Length = 1052
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 256/741 (34%), Positives = 393/741 (53%), Gaps = 67/741 (9%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V EK +++ A + F +EEY KG+ PP R+ ++S++I +IEKG+ L+ SLI
Sbjct: 322 IVQEKVSAMSPFAIDLDFIVEEYTAGKGKCPPQPRR-KRRSLFIASIEKGAVLMDSLIDV 380
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIE 120
R EIGL+V+DE H++ E RG LE ++KV++L +IQI MSATIGN++ +S+F+
Sbjct: 381 QRPHEIGLVVVDELHLIGERGRGATLEAFLTKVMFLNANIQIVGMSATIGNLSEISSFLN 440
Query: 121 GITYVENSRPTKHSEYVTVDKRVFQ-SFDGKSLTEIY--ADNLDY----SLTGSGPDAVL 173
Y RP + EY+ + + + G++L EI+ + ++DY ++ + PD +
Sbjct: 441 ADVYTRGFRPVELKEYIKCGPDLMEINSAGQTLEEIFVPSRSVDYNYSEAVKRADPDHLA 500
Query: 174 HLVQ---GNLMVLIFCSSKIACSNLALRLQFDRFPGTK--EYKKQEKEDLIEALKEENDG 228
L+ L+FC S+ C N+AL L P K E+++ EK DL++AL ++ G
Sbjct: 501 GLISECAPEHCCLVFCPSRKNCENVALLLS-RIVPKQKFFEHRRSEKLDLMDAL-DKMCG 558
Query: 229 KLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVII 288
LS L + + YG+AYHH+ LT ER+ IE AY G + +ICCTSTLAAGVNLPA+RVII
Sbjct: 559 ILSPVLAKTLPYGIAYHHSGLTTDERKYIETAYRFGVVTVICCTSTLAAGVNLPAKRVII 618
Query: 289 RDSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISS- 347
R YVG++F++L YKQMVGRAGR GL E+GESI++ ++ + L + + + +SS
Sbjct: 619 RAPYVGQEFMTLCKYKQMVGRAGRAGLGEAGESILIAQSKDNLLVGQMLFSPMDKALSSL 678
Query: 348 -HMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLF-YQLKSPEDQQTFLETTLSEIV-- 403
+ L LIL VV NL D+ L+ TL Q KS LE + EIV
Sbjct: 679 DQQEAVGLQSLILSVVGLNLAECRRDLNRLVNSTLLSVQAKS-------LEVAVDEIVLR 731
Query: 404 ------------------------ASLLASKGTMLTMNEAGH----------LSLTSIAK 429
+ ++ S+ T AG LT+I +
Sbjct: 732 ILREMFKNKVLQLTEPPAKSKINSSDIITSQDVSQTNRPAGERRLLIGQSTPFKLTNIGR 791
Query: 430 AAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEYRIPSDGILLSRSKV-YD 488
AA +AG+ + I+ +L + L N H+L+LV+ D + + + + +
Sbjct: 792 AAFKAGIDYKRANAIHKELQQAQQQLILSNYFHLLYLVVCFNSNERGDELFPADASILFG 851
Query: 489 RYTKFHPQTLRVAEALGVTENLVA-LNVTGKLKDEKKALLCRFFHACILYDVLNFDNHQK 547
YT + + + +G TE A L T ++ L R + IL D+LN
Sbjct: 852 VYTSLPLDSQALFKQIGFTEAHAARLFKTQSVQGPLSLQLNRLYKVLILADILNLLPLPS 911
Query: 548 VAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELWCYKQLLTDLPQTLMYCRAPNLRA 607
VA Y ++ LQ+ ++ ++ +S + R CEEL E WCYK L + + C L
Sbjct: 912 VASKYNVERGTLQHLISQSTAASSAIVRLCEELEEFWCYKPLFERILNKMDRCGTFELEP 971
Query: 608 LMDLPGVKIGRARQLLNAGYSSLELIARADAKEMVAKIRHLPLRSARNLISAAKLHFITK 667
LM+LP VKI RARQL AG+ ++E IAR +V + H+PLR A ++SAAK+ + K
Sbjct: 972 LMELPAVKINRARQLYAAGFQTIEDIARVRPTHLVQSLEHMPLRVATEIVSAAKIILMKK 1031
Query: 668 MD----KVEAMKNLIQNLQKN 684
+D + E +K+ ++ KN
Sbjct: 1032 LDHLEEETENLKDCLKTSDKN 1052
>gi|405969237|gb|EKC34220.1| Helicase POLQ-like protein [Crassostrea gigas]
Length = 1123
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 238/711 (33%), Positives = 395/711 (55%), Gaps = 44/711 (6%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V EK + LA+ A E F +EEYAG +G++PP K + ++ +YI TIEK L+ SL+++
Sbjct: 394 IVQEKVKGLAQLAVELDFLVEEYAGSRGRFPPIKHR--RRCLYIATIEKAHSLVNSLLEQ 451
Query: 61 NRIDEIGLIVIDEFHMLNEPQ-RGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFI 119
+R+D +GL+V+DE HM+ E + RG LE + KVL+ + QI MSAT+ NI L +F+
Sbjct: 452 DRLDSLGLVVVDELHMIGEGKSRGACLEATLLKVLHARAPTQIIGMSATLNNIGDLLSFL 511
Query: 120 EGITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGS----------GP 169
+ + + RP K +EYV + +F+ G++L D LD+ T + P
Sbjct: 512 KADIFSSDFRPVKLTEYVKLQDNIFEVQKGQTL----QDRLDHQRTVTFEYSPEMAKVDP 567
Query: 170 DAVLHLVQGNL---MVLIFCSSKIACSNLAL---RLQFDRFPGTKEYKKQEKEDLIEALK 223
D +L LV + LIFC +K C N+AL +L + +KQE+ DL++ L
Sbjct: 568 DHLLGLVTEVIPQHSCLIFCPTKKNCENVALMLSKLMAKHRRELSQVRKQERRDLLKELY 627
Query: 224 EENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPA 283
+ + ++ L+ I +G+AYHH+ LT ER+L+E AY G L ++ CTSTLAAGVNLPA
Sbjct: 628 RDGEQRMCPVLQHTIHFGLAYHHSGLTTDERQLLEAAYTDGVLCVLACTSTLAAGVNLPA 687
Query: 284 QRVIIRDSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPE 343
+RVI+R+ Y+G F++ + YKQM+GRAGR G +GESI++ + +D + +++ E
Sbjct: 688 KRVILRNPYIGTQFLNRSQYKQMIGRAGRAGKDTTGESILIV-SPKDRCKVWDIISGPVE 746
Query: 344 PISSHM---DPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQLKSPE---DQQTFLET 397
S + D + LIL + + S+ + V ++ TL L++ D +
Sbjct: 747 SCFSSLTYDDGKGIKSLILSSIGLQITSTTKAVFDMMSQTLL-SLQASHLSCDIVAMTKD 805
Query: 398 TLSEIVASLLASKGTMLTMNEA-----GHLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNK 452
L +++ L + L+ E L +T + +A + + + +Y+DL +
Sbjct: 806 ALQQLIDEGLVVQKRSLSQGEEIFCHDPSLEVTPLGRATFKGSIDLEFSTQLYTDLKKAE 865
Query: 453 LNFCLLNSLHMLFLVIPLEYRIPSDGILLSRSKVYDRYTKFHPQTLRVAEALGVTENLVA 512
+ L + LH+LFLV P Y + D + S + + + P L+VAE +GV E VA
Sbjct: 866 ESLVLASHLHLLFLVTP--YDLVKD-VRPSWMTYFKQISLLTPVELKVAELIGVPEAYVA 922
Query: 513 LNVTGKLKDE--KKALLCRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFA 570
+G++ + + ++ RF+ +LYD+ + +VA+ + +QN L+ T+ F
Sbjct: 923 KKASGQVTRQVVDEFVVKRFYLTLMLYDLWRQKSLWEVAEKFDQPRGFIQNLLSSTASFG 982
Query: 571 SKVYRFCEELPELWCYKQLLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSL 630
+ VY FC+EL E W Y++LL + L YC + L LM++ GVK+GRARQL +AG+ S
Sbjct: 983 ACVYHFCQELEEFWAYQELLGTFVKRLAYCVSAELLPLMEISGVKLGRARQLYSAGFHST 1042
Query: 631 ELIARADAKEMVAKIRHLPLRSARNLISAAKLHFITKMDKVEAMKNLIQNL 681
+A A+ + +V I+ +P + AR ++++AKL +K EA+ +++L
Sbjct: 1043 AQVAAAEPETLVRSIKQIPRKVARQIVASAKLLL---NEKAEALLQEVEDL 1090
>gi|311262877|ref|XP_003129397.1| PREDICTED: helicase, POLQ-like [Sus scrofa]
Length = 1119
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 244/716 (34%), Positives = 385/716 (53%), Gaps = 48/716 (6%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V EK L+ E F++EEYAG KG++PP KR+ KKS+YI TIEKG L+ SLI+
Sbjct: 399 IVQEKIAGLSSFGIELGFFVEEYAGSKGKFPPIKRR-EKKSLYIATIEKGHSLVNSLIET 457
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIE 120
RI +GL+V+DE HM+ E RG LE ++K+LY K+ QI MSAT+ N+ L F+
Sbjct: 458 GRIGGLGLVVVDELHMIGEGSRGATLEMTLAKILYTSKTTQIVGMSATLNNVEDLQAFLR 517
Query: 121 GITYVENSRPTKHSEYVTVDKRVFQ----SFDGKSLTEIYADNLDYSLTGSGPDAVLHLV 176
Y RP + EY+ ++ +++ + +G + + + +L PD ++ LV
Sbjct: 518 AEYYSSWFRPVELKEYLKINDTIYEVDSKAENGMTFSRLLNYKYSDTLKKLDPDHLVALV 577
Query: 177 Q---GNLMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTN 233
N L+FC +K C N+A + +++++EK +L++ LK + G +
Sbjct: 578 TEVIPNHSCLVFCPTKKNCENVAEMICKILSKEYLKHREKEKHELLKNLKAISGGSVCPV 637
Query: 234 LEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYV 293
L+ I +GVAYHH+ LT ER+L+EEA+ AG L ++ CTSTLAAGVNLPAQRVI+R YV
Sbjct: 638 LKHTIPFGVAYHHSGLTNDERKLLEEAHSAGVLCLLTCTSTLAAGVNLPAQRVILRAPYV 697
Query: 294 GRDFISLNMYKQMVGRAGRTGLQESGESIMLC--KTMQDFLRFSS--MMNAGPEPISSHM 349
++F+ N YKQM+GRAGR G+ GESI++ K Q L S + N +
Sbjct: 698 AKEFLKRNQYKQMIGRAGRAGIDSVGESILIFQEKDKQQVLELISRPLENCYSRLVQEFT 757
Query: 350 DPPTLVDLILEVVAANLCSSLEDVKTLIKHTLF-YQLKSPEDQQTFLETT---LSEIVAS 405
+ L L ++ + ++L D+ + T F Q K +++ E T L +
Sbjct: 758 K--GIQTLFLSLIGLKIATTLGDIYHFMSGTFFGVQQKILLKEKSLWEITVESLRYLTEK 815
Query: 406 LLASKGTMLTMNEAGHLS----------------LTSIAKAAVQAGLSHDVCLIIYSDLL 449
L K T+LT E G L +T + +A+ + + C I+Y DL
Sbjct: 816 GLLQKDTVLT--EKGLLQKDTVQGSEEEFQYSFRITKLGRASFKGTIDLAYCDILYRDLK 873
Query: 450 HNKLNFCLLNSLHMLFLVIP--LEYRIPSDGILLSRSKVYDRYTKFHPQTLRVAEALGVT 507
L + LH+++L P + R D ++ R ++++ P VA +GV+
Sbjct: 874 KGLEGLVLESLLHLIYLTTPYDMASRCDPDWMVYFR-----QFSQLSPAEQNVATLVGVS 928
Query: 508 ENLVALNVTGKLKDEK--KALLCRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNV 565
EN + +G+ +K K ++ R + + +LY +L + +V++ + + H+QN L+
Sbjct: 929 ENFIGKKASGQAIKKKVDKTIVNRLYLSFVLYTLLKETSVWRVSEKFNMPRGHIQNLLSG 988
Query: 566 TSYFASKVYRFCEELPELWCYKQLLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNA 625
+ F+S V FCEEL E W Y+ LL +L + L YC L LM++ GV GRA+QL NA
Sbjct: 989 AAAFSSCVLHFCEELEEFWVYRALLVELTKKLTYCVKAELIPLMEVAGVLEGRAKQLYNA 1048
Query: 626 GYSSLELIARADAKEMVAKIRHLPLRSARNLISAAKLHFITKMDKVEAMKNLIQNL 681
GY SL +A AD + ++ I HL R A+ ++S+AK+ +K EA++ ++ L
Sbjct: 1049 GYKSLAHLANADPEVLIRTIDHLSRRQAKQIVSSAKMLL---HEKAEALQEEVEEL 1101
>gi|345316969|ref|XP_001517710.2| PREDICTED: helicase POLQ, partial [Ornithorhynchus anatinus]
Length = 777
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 242/713 (33%), Positives = 383/713 (53%), Gaps = 40/713 (5%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V EK + L E F +EEYAG KG+ PP KR+ K+S+++ TIEKG L+ +LI+
Sbjct: 71 VVQEKIRGLLHFGIELDFLVEEYAGSKGRLPPVKRR-RKRSVFVATIEKGHSLVNALIET 129
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIE 120
R+ ++GL+V+DE HM+ E RG +LE ++K+LY ++ QI MSAT+ N+ L F+
Sbjct: 130 GRMSDLGLVVVDELHMIGEGSRGALLEMTLAKILYTSQATQIIGMSATLNNVGDLQQFLR 189
Query: 121 GITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGS----GPDAVLHL- 175
Y + RP + EY+ ++ +++ D ++ L+Y + PD V+ L
Sbjct: 190 AEYYTGDFRPVELKEYIKINDTIYEVDDKAEAGFTFSRLLEYKYSAGQQKLDPDHVVALA 249
Query: 176 --VQGNLMVLIFCSSKIACSNLA-LRLQFDRFPGTKEY---KKQEKEDLIEALKEENDGK 229
V + LIFC +K C N+A + +F +KEY +++EK D+I L+ DG
Sbjct: 250 TEVIPDHSCLIFCPTKKNCENVAEMICKFL----SKEYVKHREKEKADVIRNLRAIGDGS 305
Query: 230 LSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIR 289
L+ + +G+AYHH+ LT ERR IEEAY AG + ++ CTSTLAAGVNLPA+RVI+R
Sbjct: 306 FCPILKHTVPFGIAYHHSGLTNDERRQIEEAYSAGVICLLACTSTLAAGVNLPARRVILR 365
Query: 290 DSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHM 349
Y+ DF+ N YKQM+GRAGR G+ GESI++ + L S++ E S++
Sbjct: 366 APYISTDFLKKNQYKQMIGRAGRAGIDTVGESILIVQEKDTHL-VRSLVGGPLENCYSNL 424
Query: 350 DPPT---LVDLILEVVAANLCSSLEDVKTLIKHTLF-YQLKSPEDQQTFLETTLSE---- 401
+ L+L V+ + ++E++ + T F Q K +++ E T
Sbjct: 425 VKEITGGIQSLLLSVIGLKIARNVEEIYHFMGGTFFGVQQKILSKEKSLWEITRESLECL 484
Query: 402 IVASLLASKGTMLTMNEA-GHLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNS 460
I LL K T EA G L +T + +A+ + G+ ++Y DL L +
Sbjct: 485 IKKGLLQGKITWENEEEAHGDLRITRLGQASFKGGIDLAYYDVLYEDLKRGLQGLVLESC 544
Query: 461 LHMLFLVIPLEYRIPSDGILLSRSKV---YDRYTKFHPQTLRVAEALGVTENLVALNVTG 517
LH+++LV P D I L + +++ VAE LGV E+ + +G
Sbjct: 545 LHLIYLVTPY------DMISLCNPDWMIYFRQFSHLSSAEQNVAEILGVPESYIMRKASG 598
Query: 518 KL--KDEKKALLCRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYR 575
+ K K+++ RF+ + +LY +L + KVA+ + + ++QN L+ + F+S V R
Sbjct: 599 QAIKKTVDKSIVNRFYLSFVLYALLRETDIWKVAEKFHLPRGYVQNLLSRAAAFSSCVLR 658
Query: 576 FCEELPELWCYKQLLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIAR 635
FCEEL E W Y+ L +L + L +C L LM++ GV RA QL AGY SL +A
Sbjct: 659 FCEELEEFWVYRGLFAELTKKLTFCVRTELIPLMEVAGVLKARAEQLHGAGYRSLAHLAN 718
Query: 636 ADAKEMVAKIRHLPLRSARNLISAAKLHFITKMDKVEAMKNLIQNLQKNYDNI 688
AD +V+ + L AR +IS+A++ +K EA++ + +L + D+I
Sbjct: 719 ADPGVLVSTVDRLSRHQARQIISSAQMLL---REKAEALQAEVDDLWQLPDDI 768
>gi|431916152|gb|ELK16404.1| Helicase POLQ-like protein [Pteropus alecto]
Length = 1040
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 238/711 (33%), Positives = 372/711 (52%), Gaps = 73/711 (10%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V EK L+ E F++EEYAG KG++PP KR+ KKS+YI TIEKG L+ SLI+
Sbjct: 355 IVQEKISGLSSFGIELGFFVEEYAGSKGKFPPIKRR-EKKSLYIATIEKGHGLVNSLIET 413
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIE 120
RI +GL+V+DE HM+ E RG ILE ++K+LY K+ QI MSAT+ N+ L F++
Sbjct: 414 GRISSLGLVVVDELHMIGEGSRGAILEMTLAKLLYTSKTTQIIGMSATLNNVEDLQEFLQ 473
Query: 121 GITYVENSRPTKHSEYVTVDKRVFQ----SFDGKSLTEIYADNLDYSLTGSGPDAVLHLV 176
Y RP + EY+ ++ + + + +G + + + +L PD ++ LV
Sbjct: 474 AEYYTSQFRPVELKEYLKINDSICEVDSKAENGMTFSRLLNYKYSDTLKKMDPDHLVALV 533
Query: 177 Q---GNLMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTN 233
N L+FC +K C N+A + ++K++EK+++I+ LK + G L
Sbjct: 534 TEVIPNYSCLVFCPTKKNCENVAEMICTFLSKEYMKHKEKEKQEVIKNLKNISSGNLCPV 593
Query: 234 LEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYV 293
L+ I GVAYHH+ LT+ ER+L+EEAY G L ++ CTSTLAAGVNLPA+RVI+R YV
Sbjct: 594 LKRTIPLGVAYHHSGLTSDERKLLEEAYSTGVLCLLTCTSTLAAGVNLPARRVILRAPYV 653
Query: 294 GRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPT 353
++F+ N YKQM+GRAGR G+ GESI++ +
Sbjct: 654 AKEFLKRNQYKQMIGRAGRAGIDSVGESILILQ--------------------------- 686
Query: 354 LVDLILEVVAANLCSSLEDVKTLIKHTLF-YQLKSPEDQQTFLETT---LSEIVASLLAS 409
E + ++L D+ + T F Q K +++ E T L ++ L
Sbjct: 687 ------EKDKQQIATNLHDIYHFMSGTFFGVQQKILLKEKSLWEITVESLRYLIEKGLLQ 740
Query: 410 KGTMLTMNEAGHLS----------------LTSIAKAAVQAGLSHDVCLIIYSDLLHNKL 453
K T+LT E G + +T + +A+ + + C I+Y DL
Sbjct: 741 KDTILT--EKGRMQKDALCEFKEEFQYSFHITRLGRASFKGTIDLAYCDILYRDLKKGLE 798
Query: 454 NFCLLNSLHMLFLVIPLEYRIPSDGILLSRSKVYDR-YTKFHPQTLRVAEALGVTENLVA 512
L + LH+++L P + D + +Y R +++ P A +GV+EN +
Sbjct: 799 GLVLESLLHLIYLTTPYDMAFQRDPDWM----IYFRQFSQLSPAEQNAAALVGVSENYIG 854
Query: 513 LNVTGKLKDEK--KALLCRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFA 570
+G+ +K K ++ R + + ILY +L N V++ + + ++QN L + F+
Sbjct: 855 KKASGQAIKKKVDKNIVNRLYLSFILYTLLKETNIWNVSEKFNMPRGYVQNLLTAAATFS 914
Query: 571 SKVYRFCEELPELWCYKQLLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSL 630
S V FCEEL E W Y+ LL +L + L YC L LM++ GV GRA+QL N GY SL
Sbjct: 915 SCVLHFCEELEEFWVYRALLVELTKKLTYCVKAELIPLMEVTGVLEGRAKQLYNGGYKSL 974
Query: 631 ELIARADAKEMVAKIRHLPLRSARNLISAAKLHFITKMDKVEAMKNLIQNL 681
+A AD + ++ I HL R A+ ++S+AK+ +K EA++ ++ L
Sbjct: 975 AHLANADPEVLIRTIDHLSRRQAKQIVSSAKMLL---HEKAEALQEEVEEL 1022
>gi|242022123|ref|XP_002431491.1| DNA polymerase theta, putative [Pediculus humanus corporis]
gi|212516779|gb|EEB18753.1| DNA polymerase theta, putative [Pediculus humanus corporis]
Length = 1051
Score = 377 bits (968), Expect = e-101, Method: Compositional matrix adjust.
Identities = 247/714 (34%), Positives = 400/714 (56%), Gaps = 54/714 (7%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V EK + ++ A + F +EEYA KG PP KR+ +KS+ I T+EK ++ SLI+
Sbjct: 334 IVQEKVKDFSQFAIDLGFLVEEYAAGKGVIPPIKRR-RRKSVIIATMEKALVVVNSLIEA 392
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIE 120
R+ E GLIV+DE HML E RG ILE ++++V+Y + IQI M+ATIGN+ + F++
Sbjct: 393 RRLHEFGLIVVDELHMLAEEGRGAILETLLTQVIYNRDKIQIIGMTATIGNLEEVGKFLK 452
Query: 121 GITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIY-ADNLDYSLTGSGPDAVLHLVQGN 179
YV N RP +EY+ D++++ S D S + L S G+ PD + LVQ
Sbjct: 453 AECYVGNFRPVSLNEYIKCDRKIY-SIDWNSENGVKECRKLPLSAEGTDPDGISDLVQEV 511
Query: 180 L---MVLIFCSSKI---ACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTN 233
+ LIFC SK C L+ L D + K+Q+K+ L AL E++ ++
Sbjct: 512 IPDDSCLIFCPSKKIVKRCFFLSRILPRDLM----KIKEQQKKSLYRALVSESNDQICPV 567
Query: 234 LEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYV 293
L++ + +GVAYHH+ LTAGER+L+EE++ GTL +ICCTSTLA GVNLPA+RVI+R YV
Sbjct: 568 LKKTLPFGVAYHHSGLTAGERKLLEESFRDGTLSVICCTSTLAVGVNLPAKRVILRSPYV 627
Query: 294 GRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPT 353
G+DFISL+ YKQMVGRAGR+G GES ++C+ + D + S++ + + +S +D
Sbjct: 628 GKDFISLSRYKQMVGRAGRSGYGAEGESFLMCQ-ITDLEKVKSLLKSPMDQTTSKIDLEN 686
Query: 354 LVDLILEVVAANLCSSLEDVKTLIKHTLFY---------------------------QLK 386
+L+L + ++ + ++ L+K +L + ++K
Sbjct: 687 CKNLVLSSIGLGTATTRKSLRELLKCSLLHVQANKLNVDTKKMTDSCISSLYKQGALKIK 746
Query: 387 SPE-DQQTFLE-TTLSEIVASLLASKGTMLTMNEAGHLSLTSIAKAAVQAGLSHDVCLII 444
S E D+ +E ++S++ + + L ++ L+++ + +AA++ GLS D +
Sbjct: 747 SIELDEDKDVEGNSISKLDLNNATNTKKSLKISNDSPLTISRLGRAAMKGGLSLDKAHEL 806
Query: 445 YSDLLHNKLNFCLLNSLHMLFLVIPLEYRIPSDGILLSRSKVYDRYTKFHPQTLRVAEAL 504
Y DL+ + + LL +LH+L+LV P + I + S ++ Y + + + A +
Sbjct: 807 YGDLVKAQSSLVLLTNLHLLYLVTPPDIIAQ---IKPNFSVYFNVYMELNANEVHTANII 863
Query: 505 GVTE---NLVALNVTGKLKDEKKALLCRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQN 561
GVTE + +A+ + K E ++ RF+ + +L + VA ++ + +Q
Sbjct: 864 GVTEFAMSKLAMGIHPKAIPE--IVINRFYISLMLNKLWKQHTVWDVASLFELPRGQIQT 921
Query: 562 FLNVTSYFASKVYRFCEELPELWCYKQLLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQ 621
+ + +A+ V RFCE+L + W +K LLTD L +C + L LM+LP VK GRA+Q
Sbjct: 922 LMTSAATYANSVLRFCEKLEKFWSFKSLLTDFAPRLAHCCSTELLPLMELPAVKRGRAKQ 981
Query: 622 LLNAGYSSLELIARADAKEMVAKIRHLPLRSARNLISAAKLHFITKMDKVEAMK 675
L G+ +L+++A A A ++V I HL L+ A +I+AAKL M+K E +K
Sbjct: 982 LYEGGFKTLQILANAKAGDLVRSIDHLSLKVASQIIAAAKLLL---MEKAENLK 1032
>gi|189533893|ref|XP_691411.3| PREDICTED: helicase, POLQ-like [Danio rerio]
Length = 1010
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 243/695 (34%), Positives = 380/695 (54%), Gaps = 37/695 (5%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V EK + L+ E F +EEYAG KG++PP KR+ NK S+YI TIEKG L+ SLI+
Sbjct: 314 LVQEKVRGLSSFGIELDFLVEEYAGSKGKFPPVKRR-NKNSLYITTIEKGHSLVNSLIEN 372
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIE 120
+R+D IGL+V+DE HML + RG ILE +SK+LY+ KS Q+ MSAT+GN+ L +F+
Sbjct: 373 DRLDNIGLVVVDELHMLGDGSRGAILEMTLSKILYMSKSTQVIGMSATLGNVKDLQSFLR 432
Query: 121 GITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGS----GPDAVLHL- 175
Y N RP + EYV + +++ + ++ L++ + PD ++ L
Sbjct: 433 AENYTNNFRPVELKEYVKIKDSIYEVDPKEEACFTFSRLLNFKYSSGMQKMDPDHIIALA 492
Query: 176 --VQGNLMVLIFCSSKIACSNLA------LRLQFDRFPGTKEYKKQEKEDLIEALKEEND 227
V LIFC++K C NLA L +F + +K+ EK L+ LK +
Sbjct: 493 TEVIPQQSCLIFCATKKNCENLAGMICKYLNKEFIK------HKEAEKAILLGELKSSGN 546
Query: 228 GKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVI 287
G L L++ I +G+AYHH+ LT+ ER+L+EEAY +G L ++ CTSTLAAG+NLPA+RVI
Sbjct: 547 GSLCPVLQKTIPFGLAYHHSGLTSDERKLVEEAYSSGVLCLLTCTSTLAAGINLPARRVI 606
Query: 288 IRDSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISS 347
+R YV DF+ + YKQMVGRAGR G+ GESI++ + +D ++ A E S
Sbjct: 607 LRSPYVAADFLKRSQYKQMVGRAGRAGIDAMGESILILQD-KDINTAKKLLCAPMEKCYS 665
Query: 348 ---HMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQLKSPEDQQTFLETTLSEIVA 404
H L+ LIL ++ + +++E VK L+K T ++ + L E +
Sbjct: 666 NLLHDGGRGLLSLILSLIGLKITTTVEQVKDLMKGTFLGVQEAQVSPEKSLWDLTVESIQ 725
Query: 405 SLLASKGTMLTMNEAGH--LSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNS-L 461
+L ++ +E L +T + +A + + C ++Y D L L LLNS L
Sbjct: 726 TLKQKNLIEVSSDENNQNILQITRLGRATYKGSVDLSYCDVLYRD-LSKGLEGLLLNSFL 784
Query: 462 HMLFLVIPLE--YRIPSDGILLSRSKVYDRYTKFHPQTLRVAEALGVTENLVALNVTGK- 518
H+++LV P + ++ D ++ R ++T ++A +GV E+ VA G+
Sbjct: 785 HLVYLVTPYDMVHQCKPDWMIYFR-----QFTNLSAAEQKMATTVGVPESFVARKAAGQS 839
Query: 519 -LKDEKKALLCRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFC 577
K ++ R + A +L+ +L N V++ + + +Q L+ S F S V F
Sbjct: 840 VRKSVDVVVVNRLYLALVLFSLLKETNLWIVSERFQLTRGFVQTLLSSASAFGSSVLHFT 899
Query: 578 EELPELWCYKQLLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIARAD 637
EEL E W YK LL++L + L YC L LM++ GV RA+QL +AGY +L +A AD
Sbjct: 900 EELEEFWAYKALLSELTRRLTYCVQAELIPLMEVSGVLEHRAKQLYSAGYKTLSHLANAD 959
Query: 638 AKEMVAKIRHLPLRSARNLISAAKLHFITKMDKVE 672
+ +V I +L + A +I++AK+ K + ++
Sbjct: 960 PQTLVQTIENLFKKQAYQIIASAKMLLTEKAEALQ 994
>gi|195127341|ref|XP_002008127.1| GI13326 [Drosophila mojavensis]
gi|193919736|gb|EDW18603.1| GI13326 [Drosophila mojavensis]
Length = 1022
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 247/729 (33%), Positives = 385/729 (52%), Gaps = 71/729 (9%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V EK +++ A F ++EY KG+ PP + Q ++S+++ +IEKG+ L+ SLI
Sbjct: 292 IVQEKVSAMSPFAIALDFIVDEYTAGKGKCPP-QPQRKRRSLFVASIEKGAVLMDSLIDA 350
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIE 120
R EIG++V+DE H++ E RG LE ++KV++LK +IQI MSATIGN+N +S+F+
Sbjct: 351 QRAHEIGMVVVDELHLIGERGRGATLEAFLTKVMFLKANIQIVGMSATIGNLNEISSFLN 410
Query: 121 GITYVENSRPTKHSEYVTVDKRVFQ-SFDGKSLTEIYAD----NLDYS--LTGSGPDAVL 173
Y RP + E++ + + + G++L EI+ N +YS + + PD +
Sbjct: 411 ADVYTRGFRPVELKEFIKCGNDLLEINSAGQTLEEIFVPSRTVNYNYSAAVERADPDHLA 470
Query: 174 HLVQ---GNLMVLIFCSSKIACSNLALRLQFDRFPGTK--EYKKQEKEDLIEALKEENDG 228
L+ L+FC ++ C N+AL L P K ++++ EK DL++AL ++ G
Sbjct: 471 GLITECAPEHCCLVFCPTRKNCENVALLLS-RIVPKQKFFQHRQSEKADLMDAL-DKMCG 528
Query: 229 KLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVII 288
LS L + + YG+AYHH+ LT ER+ IE AY G + +ICCTSTLAAGVNLPA+RVII
Sbjct: 529 ILSPVLAKTLPYGIAYHHSGLTTDERKYIETAYRFGVITVICCTSTLAAGVNLPAKRVII 588
Query: 289 RDSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISS- 347
R YVG++F++L YKQMVGRAGR GL E+GESI++ ++ + L + + + +SS
Sbjct: 589 RAPYVGQEFMTLCKYKQMVGRAGRAGLGEAGESILITQSKDNALVGQMLFSPMDKALSSL 648
Query: 348 -HMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQLKSPEDQQTFLETTLSEIVASL 406
+ L LIL V+ NL D+ L+ TL Q LE + E+V +
Sbjct: 649 DQFEAVGLQSLILSVIGLNLADCRRDLNRLVNSTLLAV------QAAALEVAVDELVLRI 702
Query: 407 LA--------------------SKGTMLT--MNEAG--------------HLSLTSIAKA 430
L S M T +N++G LTSI +A
Sbjct: 703 LRDMFKNKVLQLRESAPKSKPNSSDIMTTQDINQSGRSAPDRRLLISQSTRFQLTSIGRA 762
Query: 431 AVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEYR------IPSDGILLSRS 484
A +AG+ + I+ +L + L + +H+L+LV+ IP+D +L R
Sbjct: 763 AFKAGIDYKRTFAIHKELQLAQQQLILTSYVHLLYLVVCFNSNERGDELIPADASILFR- 821
Query: 485 KVYDRYTKFHPQTLRVAEALGVTENLVA-LNVTGKLKDEKKALLCRFFHACILYDVLNFD 543
Y QT + + LG TE A L T ++ L R + IL DVL+
Sbjct: 822 ----EYNLLPAQTQALFKQLGFTEAHAAKLAKTQSVQGPLALQLNRLYKVLILADVLSLH 877
Query: 544 NHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELWCYKQLLTDLPQTLMYCRAP 603
+A Y ++ LQ ++ ++ AS + R CE++ E WC+K L + + C
Sbjct: 878 PLPSIASKYNVERGTLQQLISQSTAAASAIVRLCEQIDEFWCFKPLFERINHKMDRCGTQ 937
Query: 604 NLRALMDLPGVKIGRARQLLNAGYSSLELIARADAKEMVAKIRHLPLRSARNLISAAKLH 663
L L++LP VKI RA+QL AG+ ++E +A+ E+V + +PL+ A +ISAAK+
Sbjct: 938 ELEPLLELPAVKINRAKQLYAAGFRTIEDVAKTRPFELVKAVEFMPLKVANEIISAAKII 997
Query: 664 FITKMDKVE 672
+ K+D +E
Sbjct: 998 LMKKLDHLE 1006
>gi|348532301|ref|XP_003453645.1| PREDICTED: helicase POLQ [Oreochromis niloticus]
Length = 993
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 240/687 (34%), Positives = 380/687 (55%), Gaps = 46/687 (6%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V EK + LA E F +EEYAG KG++PP KR+ NK S+YI TIEKG L+ SLI+
Sbjct: 302 LVQEKVRGLASFGLELDFMVEEYAGSKGRFPPVKRR-NKTSLYIATIEKGHSLVNSLIET 360
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIE 120
+R+D +GL+V+DE HML + RG I+E ++KV Y+ K+ QI MSAT+GNI L TF+
Sbjct: 361 SRLDNLGLVVVDELHMLGDGSRGAIIEMTLTKVQYVSKTTQIIGMSATLGNIKDLQTFLR 420
Query: 121 GITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGS----GPDAVLHLV 176
Y N RP + E+V + +++ + ++ L++ + + PD ++ LV
Sbjct: 421 AENYTNNFRPVQLKEFVKLHDTIYEVDPKEENCFRFSRLLNFKYSSTMQKIDPDHIIALV 480
Query: 177 QGNL---MVLIFCSSKIACSNLA------LRLQFDRFPGTKEYKKQEKEDLIEALKEEND 227
+ L+FC +K C N+A L+ F R ++++EK L+ L++ +
Sbjct: 481 TEVIPAHSCLLFCPTKKNCENVAAMICKYLKEDFLR------HREEEKGVLLRELRDSGN 534
Query: 228 GKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVI 287
G L L+ + YGVAYHH+ LT+ ER+L+EEAY +G L ++ CTSTLAAG+NLPA+RVI
Sbjct: 535 GSLCPVLKVTVPYGVAYHHSGLTSEERKLVEEAYSSGVLCLLTCTSTLAAGINLPARRVI 594
Query: 288 IRDSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISS 347
+R YV DF+ + YKQMVGRAGR G+ GESI++ + +D +++ A E S
Sbjct: 595 LRSPYVATDFLKRSQYKQMVGRAGRAGIDSVGESILILQE-KDRNMAKTLVCAPMESCYS 653
Query: 348 ---HMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQLKSPEDQQTFLETTLSEIVA 404
H D L+ L+L ++ N+ SS+E ++ ++ TL + + QQ +E +L E V
Sbjct: 654 NLMHDDGKGLLSLVLSLIGLNITSSVEQLQDFLQGTLLF----VQWQQLCVERSLLEAVQ 709
Query: 405 SLL-ASKGTMLTMNEAGHLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNS-LH 462
+ K L ++ L +T + KA +A + ++Y D L L LLNS LH
Sbjct: 710 QCVDVLKEKELITVDSQSLRVTKLGKATYKASVDLTYAEVLYKD-LSKGLESLLLNSYLH 768
Query: 463 MLFLVIPLEYRIPSDGILLSRSK-----VYDRYTKFHPQTLRVAEALGVTENLVALNVTG 517
+++LV P + L+ + K + ++T +++ A+GV E+ VA G
Sbjct: 769 LVYLVTPYD--------LIDQCKPNWMIFFRQFTLLSVAEQKMSAAVGVPESFVARKAAG 820
Query: 518 KL--KDEKKALLCRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYR 575
+ K A + R + A +L+ +L + V++ + + +Q L +S F S V
Sbjct: 821 QTVKKGVNVAAVRRMYLALVLFSLLKETDVWSVSERFQVSRGFVQTLLGSSSAFCSCVLH 880
Query: 576 FCEELPELWCYKQLLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIAR 635
F EEL E W ++ LL +L + L YC L LM++ GV RA+QL AGY +L +A
Sbjct: 881 FTEELEEFWPFRALLAELTRRLSYCVKAELIPLMEVAGVLESRAKQLYAAGYKTLTHLAN 940
Query: 636 ADAKEMVAKIRHLPLRSARNLISAAKL 662
AD + I++L + A ++++AK+
Sbjct: 941 ADPAALCTAIQNLYRKQANQIVASAKM 967
>gi|340382571|ref|XP_003389792.1| PREDICTED: helicase POLQ [Amphimedon queenslandica]
Length = 892
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 243/695 (34%), Positives = 382/695 (54%), Gaps = 35/695 (5%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V EK + L AEE F +EEYA KG+ PP +++ K +I+I TIEKG+ LI SLI+
Sbjct: 195 IVQEKVRELLPFAEELSFAVEEYASSKGRLPPVRKR-KKNTIFIATIEKGNALINSLIEI 253
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIE 120
NR+D IGL+VIDE HM+ QRG +LE + K+L+ S+Q+ MSAT+ N++ +++F+
Sbjct: 254 NRLDSIGLVVIDELHMIGGGQRGAVLESCIIKLLFTSVSVQLVGMSATLSNLHEIASFMR 313
Query: 121 GITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTE----IYADNLDYSLTGSGPDAVLHLV 176
+ N RP + +EY+ + + ++ + LT I+ + SL PD ++ LV
Sbjct: 314 AELFTGNFRPVELNEYIKLGQSIYSIGRREGLTSGVEPIFKRRIVGSLNKVDPDQLVGLV 373
Query: 177 Q--GNLMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNL 234
LIFCS+K C N+AL + K K++E+ LI+ L+ E G L L
Sbjct: 374 SEVSPSSCLIFCSTKKNCENVALMISKGLPKSAKSTKEKERRMLIQQLRIEAAG-LCPVL 432
Query: 235 EECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVG 294
+ + YG+AYHH+ LT ER++IEE Y +G L +I CTSTLAAGVNLPA+RVIIR Y+G
Sbjct: 433 AQTLPYGIAYHHSGLTGDERKVIEEGYTSGILSVITCTSTLAAGVNLPARRVIIRQPYIG 492
Query: 295 RDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHM---DP 351
+DFISL+ YKQM GRAGR+GL + GESI++ + +D RF S+++ + +S + +
Sbjct: 493 QDFISLSSYKQMAGRAGRSGLCDKGESIVILQP-KDEARFLSVLSKPCDKCTSCLLLDNQ 551
Query: 352 PTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQLKSPEDQQTFLETTLSEIVASLLASKG 411
LIL ++A + S D+ ++ TL + S + + L+ ++I++SL +S+
Sbjct: 552 QPFTSLILSLIALKILKSSSDISPFLQCTLLF---SQDHDEASLKKHCNDIISSLTSSEL 608
Query: 412 TMLTMNEA-----GHLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFL 466
L E H +T+I + + ++ +Y L + N L N LH+L +
Sbjct: 609 ISLREEEREGEKIQHYEITNIGRGVHKGCITVSDSSSVYKSLQTAQSNLILTNDLHLLTV 668
Query: 467 VIP--LEYRIPSDGILLSRSKVYDRYTKFHPQTLRVAEALGVTENLVALNVTGKLKDEKK 524
V+P L I D +++ ++ P RVA+ ++ ++A TG+ +
Sbjct: 669 VVPNSLIQSIKPDW-----KAYFEKVSRLSPDEERVADLYNISIGVLAGRYTGRNTKMTE 723
Query: 525 ALLC---RFFHACILYDVL----NFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFC 577
+C RF+ +LY +L + D VA +G +LQ+ + T +S + F
Sbjct: 724 GDMCVYIRFYVGLMLYSLLRASVSTDGVWVVASRFGCSRGYLQSVVQQTCSHSSCLVHFT 783
Query: 578 EELPELWCYKQLLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIARAD 637
ELPELW +K LL + Q L Y + NL +LM++PG+K GRARQL+ AG S +
Sbjct: 784 -ELPELWPFKLLLPPIVQKLSYSVSYNLLSLMEIPGMKQGRARQLVQAGIRSPLDLVEYS 842
Query: 638 AKEMVAKIRHLPLRSARNLISAAKLHFITKMDKVE 672
++ I HL + A LI +A+ K + +E
Sbjct: 843 PSDLSKLIEHLYVGQAGKLIKSAQSLLAEKAELLE 877
>gi|357614664|gb|EHJ69202.1| hypothetical protein KGM_11617 [Danaus plexippus]
Length = 881
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 247/687 (35%), Positives = 369/687 (53%), Gaps = 30/687 (4%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V EK +LA A + +F +EEYAG KG PP KR+ K +IYI TIEKG L+ SLI+
Sbjct: 200 IVQEKIWALAPFALQLEFLVEEYAGGKGHLPPKKRR-KKNTIYIATIEKGLALVRSLIEL 258
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIE 120
NR+DE+GLIV+DE H++ E RG LE +++ V++ K IQI MSATIGN+ L F++
Sbjct: 259 NRLDEVGLIVVDELHLIGEAGRGSTLETLLTTVIFANKGIQIVGMSATIGNLPDLGRFLK 318
Query: 121 GITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDA------VLH 174
+ + RP + EYV + +++ + L DYS D V
Sbjct: 319 AEIFEKQFRPVELKEYVKLGDVLYRLREDMELVVERKLAYDYSPAALALDPDFLGGLVSE 378
Query: 175 LVQGNLMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNL 234
+V G L+FC +K C N+A L + +++ +E+ L +L E + L
Sbjct: 379 VVPGG-SCLVFCPTKRNCENVAALLCRLQRKDMSQHRTEERSALQRSLCNE---GAAPGL 434
Query: 235 EECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVG 294
GVA+HHA L+A ER LIE A+ +G + +ICCTSTLAAGVNLPA+RVI+R VG
Sbjct: 435 VGAAAAGVAFHHAGLSADERSLIENAFRSGVISVICCTSTLAAGVNLPARRVIVRAPLVG 494
Query: 295 RDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTL 354
R +S+ YKQMVGRAGR G+ E GESI++ + +++ + ++ G P S + ++
Sbjct: 495 RQLLSMGSYKQMVGRAGRAGVCEDGESILIV-SPREWPAVRTRLSEGIPPALSSLK-TSI 552
Query: 355 VDLILEVVAANLCSSLEDVKTLIKHTLFYQLKSPEDQQTFLETTLSEIVASLLASKGTML 414
+L+L VA NLC + +K L++ TL +PE+ ++ +E + SLL S+ +
Sbjct: 553 DELLLSAVALNLCRDRKALKALLESTLLA--IAPEEGSVDIDEVCNESIGSLLRSE-ALQ 609
Query: 415 TMNEAGH-------LSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLV 467
+ GH L+++++ +AAV+ L + +L L+ LH+LFLV
Sbjct: 610 VVGRDGHVKEDELQLAVSTVGRAAVKGCLDLTTTKQLMKELEQASRGLVLMGCLHLLFLV 669
Query: 468 IPLEYRIPSDGILLSRSKVYDRYTKFHPQTLRVAEALGVTENLVALNVTGK-LKDEKKAL 526
P E I D Y Y+ + L+ A LG+TE +TGK + + +++
Sbjct: 670 TPQEVSIRPD-----YRHYYTLYSNLDEEGLQTARVLGITEVNAVRMMTGKPITNVSESV 724
Query: 527 LCRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELWCY 586
L RF+ A L D+ V+ Y I + + L+ R C EL W Y
Sbjct: 725 LNRFYVALTLRDLYRRMPFAAVSDKYNIPKGTISSLLSSAVALCLGAQRACVELGS-WTY 783
Query: 587 KQLLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIARADAKEMVAKIR 646
L +L L +C AP L ALM+LP VK GRA QL AG+ LE +ARA ++VA +
Sbjct: 784 GTLFDELASRLKHCGAPELEALMELPAVKKGRALQLHRAGFRRLEDVARAAPDDLVAAVT 843
Query: 647 HLPLRSARNLISAAKLHFITKMDKVEA 673
HL +A +LISAA++ I K++ + A
Sbjct: 844 HLSRTAANHLISAARVLLIEKVENLRA 870
>gi|345494550|ref|XP_003427319.1| PREDICTED: helicase POLQ-like isoform 2 [Nasonia vitripennis]
Length = 848
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 249/697 (35%), Positives = 362/697 (51%), Gaps = 107/697 (15%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V EK QSL A F +EEYA KG YPP KR+ K SIYICTIEK ++ LI+
Sbjct: 247 LVQEKIQSLTPFALALNFLVEEYAAEKGHYPPKKRR-KKNSIYICTIEKAQSIVNCLIEL 305
Query: 61 NRIDEIGLIVIDEFHMLN-EPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFI 119
R++EIG+IVIDE H+L RG LEC+++KV+++ ++ I MSATIGN+ +S ++
Sbjct: 306 GRLNEIGIIVIDELHLLGANGGRGATLECLLTKVMHVNSNVHIVGMSATIGNLKEISDYL 365
Query: 120 EGITYVENSRPTKHSEYVTVDKRVF--QSFDGKSLTEIYADNLDYSLTG--SGPDAVLHL 175
Y +N RP EYV + ++ + + T+ +YS PD + L
Sbjct: 366 NAELYTQNFRPVAIKEYVKCEGNIWLIDTREENIFTDKKTIKYNYSQKALQVDPDFLGGL 425
Query: 176 VQG---NLMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLST 232
V LIFCSSK C N+A+ L + +K EK L+ AL+ E G +
Sbjct: 426 VMDVAPKDSCLIFCSSKKNCENVAVLLTQVLLKSVEVHKADEKIKLLNALETET-GSICP 484
Query: 233 NLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSY 292
L++ I +GVAYHH+ LTA ERRL+EEA+ +G L +ICCTSTLAAGVNLPA+RVI R Y
Sbjct: 485 VLKKTIKFGVAYHHSGLTAEERRLLEEAFRSGILCVICCTSTLAAGVNLPARRVIFRSPY 544
Query: 293 VGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPP 352
VG +F++++ YKQM+GRAGR G+ E GESI++C R S +N
Sbjct: 545 VGTEFLNMSRYKQMIGRAGRAGISEIGESILICTK-----RDSEKIN------------- 586
Query: 353 TLVDLILEVVAANLCSSLEDVKTLIKHTLFYQLKSPEDQQTFLETTLSEIVASLLASKGT 412
+S +DV T +K K
Sbjct: 587 ---------------TSNDDVTTSVKK-----------------------------EKKN 602
Query: 413 MLTMNEAGHLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEY 472
+T+ + L L + +AA++ + +Y DL + N L++ LH+L+L+ P
Sbjct: 603 YITLVNSTELELCPLGRAAMKGSIDLQSAHTLYEDLKKAQANLVLVDYLHLLYLITP--- 659
Query: 473 RIPSDGILLSRSKVYDRYTKFHPQTLRVAEALGVTENLV---ALNVTGKLKDEKKALLCR 529
YD ++ LG+ E V +T K D++ ++ R
Sbjct: 660 --------------YDVASRL----------LGINEAAVDRLRAGITPKNVDQR--IVQR 693
Query: 530 FFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELWCYKQL 589
F+ +L ++ N + VA Y + +QN L++ S F+S V RFC+EL E W +K L
Sbjct: 694 FYVTLMLNELWNRRSIYFVADKYQVNRGTIQNLLSLASSFSSSVVRFCDELDEFWAFKDL 753
Query: 590 LTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIARADAKEMVAKIRHLP 649
L+ Q L YC A L LMDLP VKIGRA+QL AG+ SL+ IA+A ++M+ KI HLP
Sbjct: 754 LSTFGQKLTYCCASELEPLMDLPYVKIGRAKQLYKAGFKSLQSIAKAKPEDMMDKIEHLP 813
Query: 650 LRSARNLISAAKLHFITKMDKVEAMKNLIQNLQKNYD 686
R +IS+AKL ++KVE +++ ++ + D
Sbjct: 814 RRVVSQIISSAKLLL---LEKVENLRDEVEEVLDGLD 847
>gi|195167763|ref|XP_002024702.1| GL22611 [Drosophila persimilis]
gi|194108107|gb|EDW30150.1| GL22611 [Drosophila persimilis]
Length = 1029
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 244/703 (34%), Positives = 384/703 (54%), Gaps = 41/703 (5%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V EK +++ A + F ++EY KG+ PP R+ ++S++I +IEKG+ L+ SLI
Sbjct: 323 IVQEKVSAMSPFAIDLDFIVDEYTAGKGKCPPEPRR-KRRSLFIASIEKGAVLMDSLIDV 381
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIE 120
R EIGL+V+DE H++ E RG LE ++KV++L +IQI MSATIGN++ +S F+
Sbjct: 382 QRPHEIGLVVVDELHLIGERGRGATLEAFLTKVMFLNANIQIVGMSATIGNLSEISAFLN 441
Query: 121 GITYVENSRPTKHSEYVTVDKRVFQ-SFDGKSLTEIYADN--LDY----SLTGSGPDAVL 173
Y RP + EY+ + + + G +L EI+ N LD+ ++ + PD +
Sbjct: 442 ADVYTRGFRPVELKEYIKCGSDLLEINSAGHTLEEIFVPNRTLDFNYSEAVKRADPDHLA 501
Query: 174 HLVQ---GNLMVLIFCSSKIACSNLALRLQFDRFPGTK--EYKKQEKEDLIEALKEENDG 228
L+ L+FC S+ C N+AL L P K E+++ EK DL++AL ++ G
Sbjct: 502 GLISECAPEHCCLVFCPSRKNCENVALLLS-RIVPKQKFFEHRRSEKADLMDAL-DKICG 559
Query: 229 KLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVII 288
LS L + + YG+AYHH+ LT ERR IE AY G + +ICCTSTLAAGVNLPA+RVII
Sbjct: 560 VLSPVLAKTLPYGIAYHHSGLTTDERRYIETAYRFGVVTVICCTSTLAAGVNLPAKRVII 619
Query: 289 RDSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSH 348
R YVG++F++L YKQMVGRAGR GL E+GESI++ ++ +D L+ M+ + + S
Sbjct: 620 RAPYVGQEFMTLCKYKQMVGRAGRAGLGEAGESILIAQS-KDNLQVGQMLFSPMDKALSS 678
Query: 349 M---DPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQLKSPEDQQTFLETTLSEIVAS 405
+ + L LIL V+ NL D+ L+ TL Q T LE + E+V
Sbjct: 679 LYQQEAVGLQSLILSVIGLNLAECRRDLNRLVNSTLLAV------QATALEVAVDELVLR 732
Query: 406 LL--------------ASKGTMLTMNEAGHLSLTSIAKAAVQAGLSHDVCLIIYSDLLHN 451
+L + L + ++ LT+I +AA +AG+ + I+ +L
Sbjct: 733 ILREMFKNKDVNQSTRPAGDRRLFIGQSTRFKLTNIGRAAFKAGIDYKRASAIHRELKQA 792
Query: 452 KLNFCLLNSLHMLFLVIPLEYRIPSDGILLSRSKV-YDRYTKFHPQTLRVAEALGVTENL 510
+ L + H+L+LV+ D + + + + ++ Y+ ++ + + LG TE
Sbjct: 793 QKQLILNSYSHLLYLVVCFNSNERGDELFPADASILFNVYSALRTESQALFKQLGFTEAH 852
Query: 511 VA-LNVTGKLKDEKKALLCRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYF 569
A L T ++ L R + IL D+L+ V+ Y ++ LQ+ ++ +
Sbjct: 853 AARLFKTQSVQGPMAQQLNRLYKVLILSDILDLLPLPTVSCKYNVERGTLQHLISQSIAA 912
Query: 570 ASKVYRFCEELPELWCYKQLLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSS 629
+S + R C+E+ E WCYK L + + C L LM+LPGVKI RA+QL AG +
Sbjct: 913 SSALVRLCDEMEEFWCYKPLFERVLHKMDRCGTVELEPLMELPGVKINRAKQLYAAGLRT 972
Query: 630 LELIARADAKEMVAKIRHLPLRSARNLISAAKLHFITKMDKVE 672
+E IA+ +V + H+PLR A ++SAAK+ + K+D +E
Sbjct: 973 IEDIAKIRPMTLVQTVEHMPLRVATEIVSAAKIILMKKLDHLE 1015
>gi|449662379|ref|XP_002160420.2| PREDICTED: helicase POLQ-like [Hydra magnipapillata]
Length = 886
Score = 370 bits (950), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 246/678 (36%), Positives = 379/678 (55%), Gaps = 24/678 (3%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V EK + L+ A EF F++EEYA +G PP KR+ K S+YI TIEK + ++ SL++
Sbjct: 217 IVQEKVRELSPFAVEFNFHVEEYAASRGILPPRKRR-KKNSVYIATIEKANAIVNSLVEL 275
Query: 61 NRIDEIGLIVIDEFHMLNEPQ-RGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFI 119
NR DE+G+IVIDE HM+ E RG +LE ++SKVLY +Q+ MSAT GNI L TF+
Sbjct: 276 NREDELGMIVIDELHMIGEGGGRGALLEILISKVLYKFLHVQVIGMSATFGNIEELKTFL 335
Query: 120 EGITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYAD---NLDYSLTGSGPDAVLHLV 176
Y+ + RP + EYV +D +++ K+ E+Y N+ +L PD +L LV
Sbjct: 336 NAELYINDFRPVELIEYVKMDDTLYEI--NKNSEELYRKVRTNISSALKAGDPDHILTLV 393
Query: 177 QGNL---MVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTN 233
+ LIFCS+K C ++AL L KK+E++ L++ LK G T
Sbjct: 394 LEVIPQNSCLIFCSTKKNCESVALMLAKSMPKELMVNKKEERQQLLDLLKSTISGVCFT- 452
Query: 234 LEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYV 293
L+ I +G+AYHH+ LT ER+LIEEAY +G L ++CCTSTLAAGVNLPA+RVI+R Y+
Sbjct: 453 LKSTIAFGIAYHHSGLTMDERKLIEEAYSSGVLCLLCCTSTLAAGVNLPAKRVILRSPYI 512
Query: 294 GRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGP----EPISSHM 349
G F+ + YKQMVGRAGR G+ SGESI++ + +D ++ ++ GP + S+
Sbjct: 513 GNAFLMKSQYKQMVGRAGRAGIDTSGESIIILQ-QKDKVKARELLE-GPIGSCKSSLSYQ 570
Query: 350 DPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQLKSPEDQQTFLETTLSEIVASLLAS 409
D LIL ++ +C L +++ K TL Y + T L+ EI + +
Sbjct: 571 DGKGFRHLILTLLGLKICMCLNTMESFFKKTLHYIQLDDSKKSTLLDDISREINHLVKIN 630
Query: 410 KGTMLTMNEAGHLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIP 469
++ E + LTS+ +A + + D IY L H L N LH+L+L P
Sbjct: 631 MLVIIDGEENEDIQLTSLGQATYKGCMDIDKTPFIYEQLKHALSGMVLANELHLLYLATP 690
Query: 470 LEYRIPSDGILLSRSKVYDRYTKFHPQTLRVAEALGVTENLVALNVTGKL--KDE-KKAL 526
+++ + + L Y++ K +P L+ AE +GVTE++++ GK KD + +
Sbjct: 691 VDH---VENLYLKWMLYYNQVNKLNPINLKTAEFVGVTESVLSKKAAGKRCSKDSFDEFI 747
Query: 527 LCRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELWCY 586
RFF A +L+++L + +V++ Y I LQN L + + S + F E+ E W Y
Sbjct: 748 YKRFFLALLLFELLKKKSVLQVSETYEISRGFLQNLLVSSISYTSLLIHFT-EISEFWVY 806
Query: 587 KQLLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIARADAKEMVAKIR 646
K L L + L + L L+++PG+K RA QL GY +L+ +A + +++ A I+
Sbjct: 807 KILFQALLERLSNTSSIELAPLLEIPGIKEARAHQLFKCGYRTLQHLASVNPEKLSADIK 866
Query: 647 HLPLRSARNLISAAKLHF 664
+LP AR + ++AK+ F
Sbjct: 867 NLPRNQARLITTSAKVIF 884
>gi|195376279|ref|XP_002046924.1| GJ13152 [Drosophila virilis]
gi|194154082|gb|EDW69266.1| GJ13152 [Drosophila virilis]
Length = 1025
Score = 369 bits (947), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 243/724 (33%), Positives = 380/724 (52%), Gaps = 61/724 (8%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V EK +++ A F ++EY KG+ PP + Q ++S++I +IEKG+ L+ SLI
Sbjct: 293 IVQEKVSAMSPFAIALDFIVDEYTAGKGKCPP-QPQRKRRSLFIASIEKGAVLMDSLIDA 351
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIE 120
R EIGL+V+DE H++ E RG LE ++KV++L +IQI MSATIGN+N +S F+
Sbjct: 352 QRPHEIGLVVVDELHLIGERGRGATLEAFLTKVMFLNANIQIVGMSATIGNLNEISAFLN 411
Query: 121 GITYVENSRPTKHSEYVTVDKRVFQ-SFDGKSLTEIYAD------NLDYSLTGSGPDAVL 173
Y RP + EY+ + + + G++L EI+ N ++ + PD +
Sbjct: 412 ADVYTRGFRPVELREYIKCGHDLLEINSAGQTLEEIFVPQRTVSYNYSPAVERADPDHLA 471
Query: 174 HLVQ---GNLMVLIFCSSKIACSNLALRLQFDRFPGTK--EYKKQEKEDLIEALKEENDG 228
L+ L+FC ++ C N+AL L P K E+++ EK DL+ AL ++ G
Sbjct: 472 GLISECAPEHCCLVFCPTRKNCENVALLLS-RIVPKQKFFEHRQSEKADLMSAL-DKMCG 529
Query: 229 KLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVII 288
LS L + + YG+AYHH+ LT ER+ IE AY G + +ICCTSTLAAGVNLPA+RVII
Sbjct: 530 ILSPVLAKTLPYGIAYHHSGLTTDERKYIETAYRFGVITVICCTSTLAAGVNLPAKRVII 589
Query: 289 RDSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISS- 347
R YVG++F++L YKQMVGRAGR GL E+GESI++ ++ +FL + + + +SS
Sbjct: 590 RAPYVGQEFMTLCKYKQMVGRAGRAGLGEAGESILITQSKDNFLVGQMLFSPMDKALSSL 649
Query: 348 -HMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQLKSPEDQQTFLETTLSEIVASL 406
+D L LIL V+ NL D+ L+ TL Q LE + E+V +
Sbjct: 650 DQLDAVGLQSLILSVIGLNLADCRRDLNRLVNSTLLAV------QAGALEIAVDELVLRI 703
Query: 407 L------------------------------------ASKGTMLTMNEAGHLSLTSIAKA 430
L ++ L ++++ LT+I +A
Sbjct: 704 LRDMFKNKVLQLRETVPKGKSNSSDIMTTQDINQSNRSASDRRLLISQSTRFQLTNIGRA 763
Query: 431 AVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEYRIPSDGILLSRSKV-YDR 489
A +AG+ + I+ +L + L + +H+L+LV+ D + + + + +
Sbjct: 764 AFKAGIDYKRAFAIHRELQQAQQQLILTSYVHLLYLVVCFNSNERGDEMFPADANILFRE 823
Query: 490 YTKFHPQTLRVAEALGVTENLVA-LNVTGKLKDEKKALLCRFFHACILYDVLNFDNHQKV 548
YT QT + + LG TE A L T ++ L R + IL DVL V
Sbjct: 824 YTSLSTQTQALFKQLGFTEAHAARLAKTQSVQGPLALQLNRLYKVLILADVLALVPLPSV 883
Query: 549 AKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELWCYKQLLTDLPQTLMYCRAPNLRAL 608
A Y ++ LQ ++ + AS + R CE++ E WCY+ L + Q + C L +L
Sbjct: 884 ASKYNVERGTLQQLISQCTAAASAIVRLCEQIDEFWCYRPLFERINQKMDRCGTLELESL 943
Query: 609 MDLPGVKIGRARQLLNAGYSSLELIARADAKEMVAKIRHLPLRSARNLISAAKLHFITKM 668
++LP VKI RA+QL AG+ ++E +A+ +V + +PL+ A +ISAAK+ + K+
Sbjct: 944 LELPAVKINRAKQLYAAGFKTIEDVAKTRPIALVKAVEFMPLKVATEIISAAKIILMKKL 1003
Query: 669 DKVE 672
D +E
Sbjct: 1004 DHLE 1007
>gi|410904054|ref|XP_003965508.1| PREDICTED: helicase POLQ-like [Takifugu rubripes]
Length = 1016
Score = 368 bits (944), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 239/685 (34%), Positives = 378/685 (55%), Gaps = 38/685 (5%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V EK + LA E F +EEYAG KG++PP KR+ NK ++YI TIEK L+ SLI+
Sbjct: 321 LVQEKVRGLASFGLELDFMVEEYAGSKGKFPPVKRR-NKSALYIATIEKAHSLVNSLIET 379
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIE 120
R++ +GL+V+DE HML + RG ++E ++KVLY+ K+ QI MSAT+GNI L F+
Sbjct: 380 GRLENLGLVVVDELHMLGDGSRGAVIEMTLAKVLYVNKATQIIGMSATLGNIRDLQAFLR 439
Query: 121 GITYVENSRPTKHSEYVTVDKRVFQ----SFDGKSLTEIYADNLDYSLTGSGPDAVLHLV 176
Y + RP + EYV ++ +++ +G + + S+ PD ++ LV
Sbjct: 440 AENYTNDFRPVQLQEYVKLEDSIYEVDPKEENGFRFSRLLNFKYSSSMQKIDPDHIIALV 499
Query: 177 QGNLMV---LIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTN 233
+ L+FC +K C N+A + ++++ EK L+ LKE +G +
Sbjct: 500 TEVIPTHSCLVFCPTKKNCENVASMICRYLKEDFLKHREAEKSILLRELKESGNGSMCPV 559
Query: 234 LEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYV 293
L + I +G+AYHH+ LT+ ER+L+EEAY G L ++ CTSTLAAG+NLPA+RVI+R YV
Sbjct: 560 LRKTIPFGLAYHHSGLTSEERKLVEEAYSTGVLCLLTCTSTLAAGINLPARRVILRSPYV 619
Query: 294 GRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISS---HMD 350
DF+ + YKQMVGRAGR G+ GESI++ + +D S++ A E S H D
Sbjct: 620 ATDFLKRSQYKQMVGRAGRAGIDSVGESILILQD-KDRKMARSLVCAPMENCYSNLMHDD 678
Query: 351 PPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQLKSPEDQQTFLETTLSEIVASL---L 407
L+ LIL ++ N+ +S++ ++ + TL Y + +Q + +L E+V L
Sbjct: 679 GKGLLSLILSLIGLNIATSVDQMRDFLSGTLLY----VQQEQLCADRSLWEVVQRCVQHL 734
Query: 408 ASKG--TMLTMNEAGHLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNS-LHML 464
KG ++ +++ L +T + +A + + ++Y DL L+ LLNS LH++
Sbjct: 735 KDKGLVSVTELSQGHSLQVTKLGRATYKGSVDLAYSKVLYQDLTKG-LDGLLLNSFLHLV 793
Query: 465 FLVIPLEYRIPSDGILLSRSK----VYDR-YTKFHPQTLRVAEALGVTENLVALNVTGKL 519
+LV P + +LS+ K Y R ++ P R++ A+GV E+ V V G+
Sbjct: 794 YLVTPYD--------ILSQCKPEWMTYLRQFSLLSPAEQRMSAAIGVPESFVVRQVAGQT 845
Query: 520 --KDEKKALLCRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFC 577
K ++ R + A +L+ +L N VA+ + + +Q L+ +S F S V F
Sbjct: 846 VKKGVDMDVVKRMYLALVLFTLLKETNLWSVAEKFHLSRGFIQTLLSSSSAFCSCVLHFA 905
Query: 578 EELPELWCYKQLLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIARAD 637
EEL E W +K LLT+L + L YC L LM++ GV RA+QL AGY +L +A AD
Sbjct: 906 EELEEFWPFKALLTELMRRLSYCVTAELIPLMEVVGVMESRAKQLYKAGYKTLSHLANAD 965
Query: 638 AKEMVAKIRHLPLRSARNLISAAKL 662
+ I +L + A L+++A++
Sbjct: 966 PAALSKTIENLYKKQAVQLVASARM 990
>gi|324502503|gb|ADY41102.1| Helicase POLQ-like protein [Ascaris suum]
Length = 924
Score = 367 bits (941), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 243/688 (35%), Positives = 377/688 (54%), Gaps = 32/688 (4%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+ EK QSL E +EEYA KG+ PP KR+ NK S+Y+ TIEK + LI SLI++
Sbjct: 241 VAQEKVQSLCIFEESLPLLIEEYAANKGRLPPIKRR-NKSSVYVATIEKANMLINSLIEQ 299
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIE 120
RIDE+G+IV+DE HML E RG I+E ++K ++ + S Q+ MSAT+ NIN ++ F+
Sbjct: 300 GRIDELGIIVVDELHMLGEGSRGAIIEQALTKFMH-RGSGQVVGMSATLANINEVAQFLH 358
Query: 121 GITYVENSRPTKHSEYVTVDKRVFQ-SFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGN 179
+ + RP + E V ++ +F+ G+ + E+ + L PD ++ L+Q
Sbjct: 359 ASVFSTDFRPVQLVERVKINSTLFRVDIGGRLIPEVELG--ENRLARKDPDGLVPLLQDI 416
Query: 180 L---MVLIFCSSKIACSNLALRLQFDRFP-GTKEYKKQEKEDLIEALKEENDGKLSTNLE 235
+ +IFC +K C N+ RL P ++ ++E++ + AL EE DGKL T LE
Sbjct: 417 IPKRSAIIFCPTKQNCENVC-RLLTRLVPRALRDLHQKERQASVAALMEEVDGKLCTTLE 475
Query: 236 ECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGR 295
IL GVA+HH+ LTA ER++IE A+ G ++I+C TSTLAAGVNLPA+RVII+ VGR
Sbjct: 476 MGILAGVAFHHSGLTADERQIIESAFQDGIIRILCSTSTLAAGVNLPARRVIIKSPLVGR 535
Query: 296 DFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGP--EPISSHMDPPT 353
+ +S Y QMVGRAGR G + G+++ + + +F M+ AGP E S D
Sbjct: 536 EPLSKAQYLQMVGRAGRAGYDDRGDAVTIVHPGYEEAKFREML-AGPLMECKSGLSDRSL 594
Query: 354 LVDLILEVVAANLCSSLEDVKTLIKHTLFYQLKSPEDQQTFLETTLSEIVASLLASKGTM 413
L +L++V+ + ++E +I TLF +D + +E E V LL + M
Sbjct: 595 LSTFLLDLVSLKIADTMEHFGAVISTTLFGMQN--DDAASIVE----ECVNDLLNKR--M 646
Query: 414 LTMNEAGHLSLTSIAKAAVQAGLSHDVCLIIYSDLLHN-KLNFCLLNSLHMLFLVIPLEY 472
++ + G S+T + AA A + L I + LL N + L + H++F +IP +
Sbjct: 647 ISCSAVGTYSVTILGDAAFTANIPPIAALAINTSLLDNLSMGIVLSSHFHLIFTIIPFDI 706
Query: 473 RIPSDGILLSRSKVYDRYTKFHPQTLRVAEALGVTE-NLVALNVT-GKLKDEKKALLCRF 530
I D + YD Y ++ +G+ E +LV V KLK + AL R
Sbjct: 707 VIDVDWNVF-----YDEYRSLSISEQKLLGTMGIQEKDLVKCFVERPKLKAGEAAL--RL 759
Query: 531 FHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELWCYKQLL 590
+ A ++ + + + VA+ + + LQ L T AS + RF E++P+LW K LL
Sbjct: 760 YIAFMMRHIWDEEPLWSVAERFHVARGWLQGALQSTCSQASSITRFSEKVPQLWPLKHLL 819
Query: 591 TDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIARADAKEMVAKIRHLPL 650
DL + L C L L+ + GVK GRARQL + GY ++ +A AD +V+ + HL
Sbjct: 820 PDLVKRLRDCCQQELIPLLAIDGVKRGRARQLYDCGYKTIGAVASADPNALVSMVEHLSR 879
Query: 651 RSARNLISAAKLHFITKM-DKVEAMKNL 677
R AR ++++A++ ++ +KVE M+ +
Sbjct: 880 RQARTIVNSAQVIIRDQLAEKVEEMEQM 907
>gi|195435520|ref|XP_002065728.1| GK20010 [Drosophila willistoni]
gi|194161813|gb|EDW76714.1| GK20010 [Drosophila willistoni]
Length = 1063
Score = 366 bits (939), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 250/741 (33%), Positives = 394/741 (53%), Gaps = 59/741 (7%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V EK +++ A F +EEY KG+ PP + ++ +++ +IEKG+ L+ SLI
Sbjct: 327 IVQEKVSAMSPFAIALDFLVEEYTAGKGKCPPQPCR-KRRRLFVASIEKGAVLMDSLIDV 385
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIE 120
+R EIGL+V+DE H++ E RG LE +++KV++L IQI MSATIGN++ +S+F++
Sbjct: 386 DRPHEIGLVVVDELHLIGEKGRGATLEALLTKVMFLNAGIQIVGMSATIGNLSEISSFLK 445
Query: 121 GITYVENSRPTKHSEYVTVDKRVFQSF-DGKSLTEIYAD----NLDYS--LTGSGPDAVL 173
Y RP + EY+ + Q +GK+ EI+ N +YS + + PD +
Sbjct: 446 ADVYTRGFRPVELKEYIKCGTDLLQIHPNGKTPEEIFIPSRRVNFNYSPAVERADPDHLA 505
Query: 174 HLVQ---GNLMVLIFCSSKIACSNLALRLQFDRFPGTK--EYKKQEKEDLIEALKEENDG 228
L+ L+FC ++ C N+AL L P K E+++ EK DL++AL ++ G
Sbjct: 506 GLISECAPEHCCLVFCPTRKNCENVALLLS-RIVPKQKFLEHRQSEKVDLMDAL-DKICG 563
Query: 229 KLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVII 288
LS L + + YG+AYHH+ LT ER+ IE AY G + +ICCTSTLAAGVNLPA+RVII
Sbjct: 564 ILSPVLAKTLPYGIAYHHSGLTTDERKYIETAYRFGVITVICCTSTLAAGVNLPAKRVII 623
Query: 289 RDSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMM-NAGPEPISS 347
R YVG++F++L YKQMVGRAGR GL E+GESI++ ++ +D L+ MM + + +SS
Sbjct: 624 RAPYVGQEFMTLCKYKQMVGRAGRAGLGEAGESILIAQS-KDNLQVGQMMFSPMDKALSS 682
Query: 348 --HMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLF----------------------- 382
H++ L LIL V+ NL D+ LI TL
Sbjct: 683 MDHLEAVGLQSLILSVIGLNLAECRRDLNRLINSTLLAVQANALDVAVDDVVLRILREMF 742
Query: 383 ----YQLKSPEDQQ----------TFLETTLSEIVASLLASKGTMLTMNEAGHLSLTSIA 428
QL P++ + T + + ++ A+ L + ++ LTSI
Sbjct: 743 KNKVLQLSEPQNNKINKNNCSDIITTQDINQTATTSNRSATNDRRLLIGQSTRFQLTSIG 802
Query: 429 KAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEYRIPSDGILLSRS-KVY 487
KAA +AG+ + I+ +L + L N LH+L+L++ D + + + +++
Sbjct: 803 KAAFKAGIDYKRAYAIHKELKLAQHQLILTNYLHLLYLIVCFNSNERGDELFPADALRLF 862
Query: 488 DRYTKFHPQTLRVAEALGVTENLVALNVTGKLKDEKKAL-LCRFFHACILYDVLNFDNHQ 546
Y+ + LG TE A + AL L R + IL D+L+ +
Sbjct: 863 HAYSSLSINKQAIFRQLGFTEAHAAKLFKNQSVQGPLALQLNRLYKVLILDDILDLEPLP 922
Query: 547 KVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELWCYKQLLTDLPQTLMYCRAPNLR 606
VA Y ++ LQ+ ++ + +S + R C+E+ E WC+K L + + + C L
Sbjct: 923 NVASKYNVERGTLQHLISQSIAASSAIVRLCDEIDEFWCFKPLFERILRKMDRCGTLELE 982
Query: 607 ALMDLPGVKIGRARQLLNAGYSSLELIARADAKEMVAKIRHLPLRSARNLISAAKLHFIT 666
L++LP VKI RA+QL AG+ S+E IA+ +V + H+PL+ A +ISAAK+ +
Sbjct: 983 PLLELPLVKINRAKQLFAAGFKSIEDIAKTHPINLVKSVEHMPLKVATEIISAAKIILMK 1042
Query: 667 KMDKV-EAMKNLIQNLQKNYD 686
K+D + E +NL LQ N +
Sbjct: 1043 KLDHLEEETENLKVCLQTNRE 1063
>gi|432095312|gb|ELK26532.1| Helicase POLQ-like protein [Myotis davidii]
Length = 965
Score = 365 bits (938), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 235/705 (33%), Positives = 374/705 (53%), Gaps = 69/705 (9%)
Query: 5 KYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRID 64
K L+ E F++EEYAG KG++PP KR+ KKS+YI TIEKG L+ SLI+ RI
Sbjct: 289 KISGLSSFGIELGFFVEEYAGSKGKFPPIKRR-EKKSLYIATIEKGHGLVNSLIETGRIS 347
Query: 65 EIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITY 124
+GL+V+DE HM+ E RG +LE ++K+LY K+ QI MSAT+ N+ L F++ Y
Sbjct: 348 SLGLVVVDELHMIAEGSRGAVLEMTLAKILYTSKTTQIIGMSATLNNVEDLQEFLQAEYY 407
Query: 125 VENSRPTKHSEYVTVDKRVFQ----SFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQ--- 177
RP + EY+ ++ +++ + +G + + + +L PD ++ LV
Sbjct: 408 TSQFRPVELKEYLKINDAIYEVDSKAENGMTFSRLLNYKYSDALKKMDPDHLVALVTEVI 467
Query: 178 GNLMVLIFCSSKIACSNLA-LRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEE 236
N L+FC +K C N+A + +F R K ++++EK+++I+ LK + G L L+
Sbjct: 468 PNNSCLVFCPTKKNCENVAEMICKFLRKDYLK-HREKEKQEVIKNLKSISSGNLCPILKR 526
Query: 237 CILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGRD 296
I GVAYHH+ L + ER+L+EEAY G L ++ CTSTLAAGVNLPA+RVI+R YV ++
Sbjct: 527 TIPLGVAYHHSGLMSDERKLLEEAYSTGVLCLLTCTSTLAAGVNLPARRVILRAPYVAKE 586
Query: 297 FISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVD 356
F+ + YKQM+GRAGR G+ GESI++ + + I++H
Sbjct: 587 FLKRSQYKQMIGRAGRAGIDSVGESILI------------LQEKDKQQIATH-------- 626
Query: 357 LILEVVAANLCSSLEDVKTLIKHTLF-YQLKSPEDQQTFLETT---LSEIVASLLASKGT 412
L D+ + TLF Q K +++ E T L + L K T
Sbjct: 627 -------------LGDIYHFMSGTLFGVQQKILLKEKSLWEITVESLRYLTEKGLLQKDT 673
Query: 413 MLTMN-----EAGHLS---------LTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLL 458
+LT N +A + S +T + +A+ + + C I+Y DL L
Sbjct: 674 ILTENGLTQKDASYKSEEWFQYSFHITELGRASFKGTIDLAYCDILYRDLQKGLEGLVLE 733
Query: 459 NSLHMLFLVIPLEYRIPSDGILLSRSKVYDRYTKFHPQTLRVAEALGVTENLVALNVTGK 518
+ LH+++L P + D + + ++ + P VA +GV+EN + V+G+
Sbjct: 734 SLLHLIYLTTPYDMASQCDPDWMI---YFTQFNQLSPAEQNVAALVGVSENYIGKKVSGQ 790
Query: 519 L--KDEKKALLCRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRF 576
K K ++ R + + +LY +L + V++ + + ++Q+ L + F+ V F
Sbjct: 791 AIKKTVDKDIVNRLYLSFVLYALLKETSIWSVSEKFNMPRGYIQSLLTAAATFSCCVLHF 850
Query: 577 CEELPELWCYKQLLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIARA 636
CEEL E W YK LL +L + L YC L LM++ GV GRA+QL NAGY SL +A A
Sbjct: 851 CEELEEFWVYKALLVELTKKLTYCVKAELIPLMEVTGVLEGRAKQLYNAGYKSLAHLANA 910
Query: 637 DAKEMVAKIRHLPLRSARNLISAAKLHFITKMDKVEAMKNLIQNL 681
+ + ++ I HL R A+ ++S+AK+ +K EA++ ++ L
Sbjct: 911 NPEVLIKTIDHLSRRQAKQIVSSAKMLL---HEKAEALQEEVEEL 952
>gi|198467131|ref|XP_001354267.2| GA20732 [Drosophila pseudoobscura pseudoobscura]
gi|198149520|gb|EAL31320.2| GA20732 [Drosophila pseudoobscura pseudoobscura]
Length = 1052
Score = 362 bits (929), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 246/726 (33%), Positives = 384/726 (52%), Gaps = 64/726 (8%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V EK +++ A + F ++EY KG+ PP R+ ++S++I +IEKG+ L+ SLI
Sbjct: 323 IVQEKVSAMSPFAIDLDFIVDEYTAGKGKCPPEPRR-KRRSLFIASIEKGAVLMDSLIDV 381
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIE 120
R EIGL+V+DE H++ E RG LE ++KV++L +IQI MSATIGN++ +S F+
Sbjct: 382 QRPHEIGLVVVDELHLIGERGRGATLEAFLTKVMFLNANIQIVGMSATIGNLSEISAFLN 441
Query: 121 GITYVENSRPTKHSEYVTVDKRVFQ-SFDGKSLTEIYADN--LDY----SLTGSGPDAVL 173
Y RP + EY+ + + + G +L EI+ N LD+ ++ + PD +
Sbjct: 442 ADVYTRGFRPVELKEYIKCGSDLLEINSAGHTLEEIFVPNRTLDFNYSEAVKRADPDHLA 501
Query: 174 HLVQ---GNLMVLIFCSSKIACSNLALRLQFDRFPGTK--EYKKQEKEDLIEALKEENDG 228
L+ L+FC S+ C N+AL L P K E+++ EK DL++AL ++ G
Sbjct: 502 GLISECAPEHCCLVFCPSRKNCENVALLLS-RIVPKQKFFEHRRSEKADLMDAL-DKICG 559
Query: 229 KLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVII 288
LS L + + YG+AYHH+ LT ERR IE AY G + +ICCTSTLAAGVNLPA+RVII
Sbjct: 560 VLSPVLAKTLPYGIAYHHSGLTTDERRYIETAYRFGVVTVICCTSTLAAGVNLPAKRVII 619
Query: 289 RDSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSH 348
R YVG++F++L YKQMVGRAGR GL E+GESI++ ++ +D L+ M+ + + S
Sbjct: 620 RAPYVGQEFMTLCKYKQMVGRAGRAGLGEAGESILIAQS-KDNLQVGQMLFSPMDKALSS 678
Query: 349 M---DPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQLKSPEDQQTFLETTLSEIVAS 405
+ + L LIL V+ NL D+ L+ TL Q LE + E+V
Sbjct: 679 LYQQEAVGLQSLILSVIGLNLAECRRDLNRLVNSTLLAV------QANALEVAVDELVLR 732
Query: 406 LL------------ASKGTMLTMN-------------------------EAGHLSLTSIA 428
+L S L MN ++ LT+I
Sbjct: 733 ILREMFKNKVLQLTESPAAKLKMNCTDIITTQDVNQSTRPAGDRRLFIGQSTRFKLTNIG 792
Query: 429 KAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEYRIPSDGILLSRSKV-Y 487
+AA +AG+ + I+ +L + L + H+L+LV+ D + + + + +
Sbjct: 793 RAAFKAGIDYKRASAIHRELKQAQKQLILNSYSHLLYLVVCFNSNERGDELFPADASILF 852
Query: 488 DRYTKFHPQTLRVAEALGVTENLVA-LNVTGKLKDEKKALLCRFFHACILYDVLNFDNHQ 546
+ Y+ ++ + + LG TE A L T ++ L R + IL D+L+
Sbjct: 853 NVYSALRTESQALFKLLGFTEAHAARLFKTQSVQGPMAQQLNRLYKVLILSDILDLLPLP 912
Query: 547 KVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELWCYKQLLTDLPQTLMYCRAPNLR 606
V+ Y ++ LQ+ ++ + +S + R C+E+ E WCYK L + + C L
Sbjct: 913 TVSCKYNVERGTLQHLISQSIAASSALVRLCDEMEEFWCYKPLFERVLHKMDRCGTVELE 972
Query: 607 ALMDLPGVKIGRARQLLNAGYSSLELIARADAKEMVAKIRHLPLRSARNLISAAKLHFIT 666
LM+LPGVKI RA+QL AG ++E IA+ +V + H+PLR A ++SAAK+ +
Sbjct: 973 PLMELPGVKINRAKQLYAAGLRTIEDIAKIRPMTLVQTVEHMPLRVATEIVSAAKIILMK 1032
Query: 667 KMDKVE 672
K+D +E
Sbjct: 1033 KLDHLE 1038
>gi|301620543|ref|XP_002939628.1| PREDICTED: LOW QUALITY PROTEIN: helicase POLQ-like [Xenopus
(Silurana) tropicalis]
Length = 1005
Score = 362 bits (929), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 247/706 (34%), Positives = 375/706 (53%), Gaps = 34/706 (4%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V EK + LA E F +EEYAG +G++PP KR+ KKS+YI TIEKG LI SLI+
Sbjct: 305 IVQEKVRGLASFGVELDFLVEEYAGSRGRFPPIKRR-TKKSLYIATIEKGHSLINSLIET 363
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIE 120
RI+++GLIV+DE HML E RG ILE +SK+LY SIQI MSAT+ N+ L F++
Sbjct: 364 GRINDLGLIVVDELHMLGEGSRGAILEMTLSKILYTSTSIQIIGMSATLNNVAELQNFLK 423
Query: 121 GITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGS----GPDAVLHLV 176
Y N RP + E+V V +++ ++ L+Y + + PD V+ LV
Sbjct: 424 AEYYTNNFRPVELKEFVKVRDCIYEVDSNAENNLTFSRLLNYKYSNNMMKIDPDHVVALV 483
Query: 177 QGNL---MVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTN 233
+ L+FC +K C N+A + E+++ EK++LI LK +G L +
Sbjct: 484 TEVIPANSCLVFCPTKKNCENVAEMICKYLNKLYVEHREAEKKNLIADLKNIGNGVLCSV 543
Query: 234 LEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYV 293
L+ I +G+AYHH+ LT+ ER+LIEEAY AG L ++ CTSTLAAGVNLPA+RVI+R YV
Sbjct: 544 LKRTIPFGIAYHHSGLTSDERKLIEEAYSAGVLCLLACTSTLAAGVNLPARRVILRAPYV 603
Query: 294 GRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISS---HMD 350
DF+ YKQMVGRAGR G+ +GESI++ + +D +++ E S H
Sbjct: 604 ANDFLKRAQYKQMVGRAGRAGIDSAGESILIIQE-KDKELVQELISKPMENCYSNLMHNS 662
Query: 351 PPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQLKSPEDQQTFLETTLSEIVASLLASK 410
L+L ++ + + E++ + + TLF +S + L E + L+
Sbjct: 663 GKDFQSLLLSLIGLKITKTAEEIYSFVSCTLFSVQQSVLCKAKNLLDVTKESLECLVDKG 722
Query: 411 ---GTMLTMNEAGHLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLV 467
G + E ++ + A + + ++YSDL L + LH+L+LV
Sbjct: 723 LICGKTCSETEQYIFQVSKLGHATYKGCIDLACYDLLYSDLNRGLEGLVLESFLHLLYLV 782
Query: 468 IPLEY--RIPSDGILLSRSKVYDRYTKFHPQTLRVAEALGVTENLVALNVTGKL--KDEK 523
IP + + D ++ R +Y P +VA ++G+ E+ +A +G+
Sbjct: 783 IPYDLVGKFNPDWMIYFR-----QYNSLSPVEQKVAASVGIPESFLARKASGQTVKTSAN 837
Query: 524 KALLCRFFHACILYDVL---NFDNHQK---VAKMYGIQNSHLQNFLNVTSYFASKVYRFC 577
++ R + + ILY +L N +H VAK I S L+ + + + S V
Sbjct: 838 NMVVNRLYLSFILYTLLKETNLHSHNANYYVAKSIFIMYS-LEGCVLIQIWKYSCVNFIF 896
Query: 578 EELPELWCYKQLLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIARAD 637
+EL E W YK LL +L + L YC L LM++ GV RA+QL NAGY+SL +A AD
Sbjct: 897 QELDEFWAYKSLLQELTKKLTYCVKSELIPLMEVAGVMEARAKQLYNAGYTSLAHLANAD 956
Query: 638 AKEMVAKIRHLPLRSARNLISAAKLHFITKMDKVEAMKNLIQNLQK 683
+ MV KI HL A+ ++ +AK+ +K EA++ + L +
Sbjct: 957 PEVMVKKIEHLSRHQAKQIVFSAKMLV---NEKAEALQEEVDELSR 999
>gi|198437907|ref|XP_002120889.1| PREDICTED: similar to DNA helicase HEL308 [Ciona intestinalis]
Length = 1014
Score = 362 bits (928), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 243/717 (33%), Positives = 385/717 (53%), Gaps = 54/717 (7%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V EK QSLA+ A E F +EEYA KG++P +++ + +Y+CTIEK + L+ SL++
Sbjct: 313 IVQEKIQSLAQFAVELGFLVEEYAAGKGRFP-PRKRRKRNVLYVCTIEKANTLVNSLVEA 371
Query: 61 NRIDEIGLIVIDEFHMLNEP-QRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFI 119
+R+ E+GLIV+DE HM+ E +RG +E +++KV+++ S QI MSAT+ N+ L F+
Sbjct: 372 SRLSELGLIVVDELHMIGEGGRRGSTIETMLTKVMHVSGSTQIIGMSATLSNLPDLQKFL 431
Query: 120 EGITYVENSRPTKHSEYVTVDKRVFQ---------------SFDGKSLTEIYADNLDYSL 164
+ +N RP E+V V VF+ G EI + D+ +
Sbjct: 432 NADVFTDNFRPVALDEFVKVADSVFKVDSATLCPEERLEFHRMIGHQTKEIAKGDTDHIV 491
Query: 165 TGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRLQFDRFPGT-KEYKKQEKEDLIEALK 223
+ VL ++ + LIFC +K C N+A ++ P E K ++K ++E L
Sbjct: 492 S-----LVLEVIPQH-SCLIFCPTKKNCENVA-KMICKLLPRNFLEQKVKQKISMLEGLC 544
Query: 224 EENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPA 283
N+G++ L I YGVAYHH+ LT ERR+IE+ Y G L +I CTSTLAAGVNLPA
Sbjct: 545 --NEGEICQVLRGAIPYGVAYHHSGLTTDERRIIEDGYRNGVLSVITCTSTLAAGVNLPA 602
Query: 284 QRVIIRDSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPE 343
+RVIIR ++GR F+S + YKQM+GRAGR G+ GES ++ QD ++ ++ E
Sbjct: 603 RRVIIRSPHIGRSFMSRSQYKQMIGRAGRAGIDTKGESFLIVSKPQDQVKVVDLIGGPVE 662
Query: 344 P-ISSHM--DPPTLVDLILEVVAANLCSSLEDVKTLIKHTLF-YQLKSPEDQQT-FLETT 398
ISS M L+L ++ + + DV T F Q+ + ++++ LET
Sbjct: 663 TCISSLMYDSGKGFRTLLLNLIGLKIITKTSDVLNFFSKTFFSTQISTIQEKKPHLLETD 722
Query: 399 LSEIVASLLASKG------TMLTMNEA---GHLSLTSIAKAAVQAGLSHDVCLIIYSDLL 449
S V SL AS M+ M+E+ G +T + A ++ + +D+ +Y DL
Sbjct: 723 ESTNVESLSASTTEHLLSVNMIRMDESTNDGSFQVTKLGNATFKSSIDYDISNQLYDDLK 782
Query: 450 HNKLNFCLLNSLHMLFLVIPLEYRIPSDGILLSRSKVY-DRYTKFHPQTLRVAEALGVTE 508
+ L N LH+L+LV P + + D + VY + + P L A +G+ E
Sbjct: 783 NGLQGLVLENYLHLLYLVTPYDTMVSPDWM------VYLNEINRLEPGELAAATVIGIEE 836
Query: 509 NLVALNVTGKLKDEKKA---LLCRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNV 565
+ + +G+ +KKA + RF+ +L + + +V+ + LQN L+
Sbjct: 837 CYITMRASGRNPRKKKANQPKIDRFYVTLMLNLLFKGKSVWEVSTRFDQPRGFLQNLLSN 896
Query: 566 TSYFASKVYRFCEELPELWCYKQLLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNA 625
+ FAS + F +EL ELW Y+ L+ L Q L YC L LM++PGV++ RA+QLL++
Sbjct: 897 AAAFASHILLFTKELDELWAYQSLIEKLIQVLQYCTVAELVPLMEIPGVRMTRAKQLLSS 956
Query: 626 GYSSLELIARADAKEMVAKIRHLPLRSARNLISAAKLHFITKMDKVEAMKNLIQNLQ 682
G+ +L IA A + I HL + A LI++AK I +KVE+++ +++L+
Sbjct: 957 GFKTLAHIATAQPGALCQSIDHLSRKQAAQLIASAK---ILLEEKVESLQEEVEDLK 1010
>gi|195014037|ref|XP_001983947.1| GH16173 [Drosophila grimshawi]
gi|193897429|gb|EDV96295.1| GH16173 [Drosophila grimshawi]
Length = 1063
Score = 360 bits (925), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 245/724 (33%), Positives = 378/724 (52%), Gaps = 61/724 (8%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V EK +++ A F ++EY KG+ PP + Q ++S++I +IEKG+ L+ SLI
Sbjct: 331 IVQEKVSAMSPFAIALDFIVDEYTAGKGKCPP-QPQRKRRSLFIASIEKGAVLMDSLIDA 389
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIE 120
R EIGL+V+DE H++ E RG LE ++KV++L +IQI MSATIGN+N +S F+
Sbjct: 390 ERPHEIGLVVVDELHLIGERGRGATLEAFLTKVMFLNANIQIVGMSATIGNLNEISAFLN 449
Query: 121 GITYVENSRPTKHSEYVTVDKRVFQ-SFDGKSLTEIYAD------NLDYSLTGSGPDAVL 173
Y RP + EY+ + + + G++L EI+ N ++ + PD +
Sbjct: 450 ADVYTRGFRPVELKEYIKCGNDLLEINAAGQTLEEIFVPKRTVSYNYSAAVERADPDHLA 509
Query: 174 HLVQ---GNLMVLIFCSSKIACSNLALRLQFDRFPGTK--EYKKQEKEDLIEALKEENDG 228
L+ L+FC ++ C N+AL L P K E+++ EK DL++AL ++ G
Sbjct: 510 GLITECAPEHCCLVFCPTRKNCENVALLLS-RIVPKQKFFEHRQSEKADLMKAL-DQICG 567
Query: 229 KLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVII 288
LS L + + YG+AYHH+ LT ER+ IE AY G + +ICCTSTLAAGVNLPA+RVII
Sbjct: 568 ILSPVLAKTLPYGIAYHHSGLTTDERKYIETAYRFGVITVICCTSTLAAGVNLPAKRVII 627
Query: 289 RDSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISS- 347
R YVG++F++L YKQMVGRAGR GL E+GESI++ ++ + L + + + +SS
Sbjct: 628 RAPYVGQEFMTLCKYKQMVGRAGRAGLGEAGESILITQSKDNLLVGQMLFSPMDKALSSM 687
Query: 348 -HMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQLKSPEDQQTFLETTLSEIVASL 406
++ L LIL V+ NL D+ L+ TL Q LE + E+V +
Sbjct: 688 DQLEAVGLQSLILSVIGLNLADCRRDLNRLVNSTLLAV------QAGSLEVAVDELVLRI 741
Query: 407 L--------------ASKGT----------------------MLTMNEAGHLSLTSIAKA 430
L A KG L ++++ LTSI +A
Sbjct: 742 LRDMFKNKVLQLSESAPKGKPNSSDIMTTQDVNPSCRAAADRRLLISQSTRFQLTSIGRA 801
Query: 431 AVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEYRIPSDGILLSRSKV-YDR 489
A +AG+ + I+ +L + L + +H+L+L++ D + + + + +
Sbjct: 802 AFKAGIDYKRAFAIHKELQLAQQQLILTSYVHLLYLLVCFNSNERGDELFPADANILFRE 861
Query: 490 YTKFHPQTLRVAEALGVTENLVA-LNVTGKLKDEKKALLCRFFHACILYDVLNFDNHQKV 548
YT QT + LG TE A L T ++ L R + IL DVL V
Sbjct: 862 YTSLPMQTQALFMQLGFTEAHAARLAKTQSVQGPLALQLNRLYKVLILADVLALLPLPSV 921
Query: 549 AKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELWCYKQLLTDLPQTLMYCRAPNLRAL 608
A Y I+ LQ ++ + AS + R CE++ E WCYK L + + C L L
Sbjct: 922 ASKYNIERGTLQQLISQCTAAASAIMRLCEQMDEFWCYKPLFERIHHKMDRCGTLELEPL 981
Query: 609 MDLPGVKIGRARQLLNAGYSSLELIARADAKEMVAKIRHLPLRSARNLISAAKLHFITKM 668
++LP VKI RA+QL AG+ ++E +A+ +V + +PL+ A +ISAAK+ + K+
Sbjct: 982 LELPAVKINRAKQLFAAGFRTVEDVAKTRPMVLVKAVEFMPLKVATEMISAAKIILMKKL 1041
Query: 669 DKVE 672
D +E
Sbjct: 1042 DHLE 1045
>gi|444723234|gb|ELW63893.1| Helicase POLQ-like protein [Tupaia chinensis]
Length = 1018
Score = 357 bits (916), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 237/703 (33%), Positives = 359/703 (51%), Gaps = 102/703 (14%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V EK L+ E F++EEYAG KG++PP KR+ KKS+YI TIEKG L+ SLI+
Sbjct: 378 IVQEKISGLSNFGIELGFFVEEYAGSKGRFPPIKRR-EKKSLYIATIEKGHSLVNSLIEN 436
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIE 120
RI +GL+V+DE HM+ E RG ILE ++KVLY K+ QI MSAT+ N+ L F++
Sbjct: 437 ERISSLGLVVVDELHMIGEGSRGAILEMTLAKVLYTSKTTQIIGMSATLNNVEDLQEFLQ 496
Query: 121 GITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEI-YADNLDY----SLTGSGPDAVLHL 175
Y RP + EY+ ++ +++ D K+ + ++ LDY +L PD ++ L
Sbjct: 497 AEYYTSQFRPVELKEYLKINDTIYE-VDSKAENGMTFSRLLDYKYSDALKKMDPDHLVAL 555
Query: 176 VQ---GNLMVLIFCSSKIACSNLA-LRLQFDRFPGTKEYKKQ---EKEDLIEALKEENDG 228
V N L+FC SK C N+A + +F +KEY KQ EK++LI+ LK +G
Sbjct: 556 VTEVIPNYSCLVFCPSKKNCENVAEMICKF----LSKEYLKQREKEKQELIKNLKHIGNG 611
Query: 229 KLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVII 288
L L+ + +GVAYHH+ LT+ ER+L+EEAY G L + CTSTLAAGVNLPA+RVI+
Sbjct: 612 HLCPVLKRTVPFGVAYHHSGLTSDERKLLEEAYSTGVLCLFTCTSTLAAGVNLPARRVIL 671
Query: 289 RDSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSH 348
R YV ++F+ N YKQM+GRAGR G+ GESI++ +
Sbjct: 672 RAPYVAKEFLKRNQYKQMIGRAGRAGIDTVGESILILQ---------------------- 709
Query: 349 MDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLF-YQLKSPEDQQTFLETTLSEIVASLL 407
E + ++L D+ + T F Q K +++ E T+ + L
Sbjct: 710 -----------EKDRQQIATNLGDIFHFMNGTFFGVQQKILLKEKSLWEVTVESL--RYL 756
Query: 408 ASKGTMLT-MNEAGH------LSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNS 460
KG + +N+ +T + +A+ + + C +Y DL L N
Sbjct: 757 TEKGLLQKDINDKSEEEFQCAFRITKLGRASFKGTIDLAYCDTLYKDLKKGLEGLVLENL 816
Query: 461 LHMLFLVIP--LEYRIPSDGILLSRSKVYDRYTKFHPQTLRVAEALGVTENLVALNVTGK 518
LH+++L P L + D ++ R KV
Sbjct: 817 LHLVYLTTPYDLVSQCVPDWMIYFRQKV-------------------------------- 844
Query: 519 LKDEKKALLCRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCE 578
K ++ R + + +LY +L N V++ + + ++QN L + F+S V FCE
Sbjct: 845 ----DKDIVNRLYLSFVLYTLLKETNVWSVSEKFNMPRGYIQNLLTGAASFSSCVLHFCE 900
Query: 579 ELPELWCYKQLLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIARADA 638
EL E W Y+ LL +L + L YC L LM++ GV GRA+QL +AGY SL +A A
Sbjct: 901 ELEEFWVYRALLVELTKKLTYCVKAELIPLMEVTGVLEGRAKQLYSAGYKSLTHLANASP 960
Query: 639 KEMVAKIRHLPLRSARNLISAAKLHFITKMDKVEAMKNLIQNL 681
+ ++ I HL R A+ ++S+AK+ +K EA++ + L
Sbjct: 961 EVLIRTIDHLSRRQAKQIVSSAKMLL---QEKAEALQEEVDEL 1000
>gi|158300279|ref|XP_551895.3| AGAP012297-PA [Anopheles gambiae str. PEST]
gi|157013082|gb|EAL38704.3| AGAP012297-PA [Anopheles gambiae str. PEST]
Length = 914
Score = 357 bits (915), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 250/751 (33%), Positives = 381/751 (50%), Gaps = 97/751 (12%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+ EK +L+ A E +F LEEY+G KGQ PP KR+ K +I++CTIEK L+ SL++
Sbjct: 164 LAQEKMIALSPFALELQFLLEEYSGGKGQCPPRKRR-KKNTIFVCTIEKALLLLDSLVEV 222
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIE 120
R +EIGLIVIDE HM+ E +RG LE +++KV L+ IQI MSATIGN+ ++ F+
Sbjct: 223 GRANEIGLIVIDELHMIGEQRRGACLEMMITKVQVLRAGIQIVGMSATIGNLTEVARFML 282
Query: 121 GITYVENSRPTKHSEYVTVDKRVFQ-----SFDGKSLTEIYADN--LDYS-----LTGSG 168
Y + RP + E+V ++ DG S ++ + L+++ L
Sbjct: 283 ADVYSRDFRPVELKEFVKCGDDLYAVRSKGQADGGSAENVFGEKRALEFADCSEELRRLD 342
Query: 169 PDAVLHLVQGNL---MVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEE 225
D V+ L+ + L+FC +K C +L L E++ +EKE +I +LKE
Sbjct: 343 TDHVVRLILEVIPESSCLVFCPTKSKCESLCALLANHLPARLAEHRAEEKEQIIRSLKE- 401
Query: 226 NDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQR 285
DG ++ L + GVAYHHA LT ERR IE+AY AG L +I CTSTLAAGVNLPA+R
Sbjct: 402 -DGSIAPVLPQAFRVGVAYHHAGLTQDERRTIEDAYRAGILSLIVCTSTLAAGVNLPAKR 460
Query: 286 VIIRDSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPI 345
VIIR Y+G F+SL+ YKQMVGRAGR G E+GESI++C +D + M+ A +
Sbjct: 461 VIIRSPYIGNSFLSLSRYKQMVGRAGRAGFGETGESILIC-AQRDIPQVCEMLCAPMDIA 519
Query: 346 SSHM---DPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQ------------------ 384
S + D LIL + +LC S + ++ L++ TL Q
Sbjct: 520 ESALIADDRAYFKSLILSAIGLDLCESRDALQALVRCTLLAQQAERRSIDLAAVTDETIV 579
Query: 385 ---------------LKSPEDQQTFLETTLSEIVASLLASKGTMLTMNEAGHLSLTSIAK 429
L++P + + T + E + G+ + A + + K
Sbjct: 580 QLYQGNAIKARHDSCLRNPPNMLVEIGTAVEEDRSP--TKTGSSAPYDGAAGPTFVRVHK 637
Query: 430 AA-------------------------VQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHML 464
AA ++AG + + + Y ++ C+L+ +L
Sbjct: 638 AAAHPGKVIKTIQRTSPLEVNRLGKAAIRAGFNMEKAVRFYDEMKVLGERLCVLDEYDLL 697
Query: 465 FLVIPLEYR----IPSDGILLSRSKVYDRYTKFHPQTLRVAEALGVTENLVALNVTGKLK 520
L++ + R P D I+L + + L++AE G+ L+A +T ++
Sbjct: 698 HLILLEDGREVQLKPDDFIVL--------VNQLTNEQLKIAERYGINNGLIAKILTRRVA 749
Query: 521 D-EKKALLCRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEE 579
+ + + RF I++++ +VA Y + LQ + T+ A + R CEE
Sbjct: 750 SGDMVSKMMRFVRVLIVHELWKQTPLAEVASRYHVNAGSLQTLMTSTAGTAFSLLRMCEE 809
Query: 580 LPELWCYKQLLTDLPQTLM-YCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIARADA 638
+PELW +K LLT + + L YC+ L L+ LP VK+GRARQL AGY++L IARA +
Sbjct: 810 IPELWAFKHLLTGMTERLTHYCKL-ELLPLLTLPSVKLGRARQLFRAGYTTLASIARATS 868
Query: 639 KEMVAKIRHLPLRSARNLISAAKLHFITKMD 669
+E+V I HL R+A LI +AK + ++D
Sbjct: 869 RELVETIEHLNYRAASQLILSAKAKLLEEVD 899
>gi|443734649|gb|ELU18559.1| hypothetical protein CAPTEDRAFT_161173 [Capitella teleta]
Length = 820
Score = 353 bits (907), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 233/725 (32%), Positives = 369/725 (50%), Gaps = 62/725 (8%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V EK + + A E F +EEYA KGQ PP +R + +YI TIEK S L+ SLI+
Sbjct: 100 IVQEKVRIIGAFASELDFVVEEYAAGKGQIPPRERH-KRNVLYIATIEKSSALVNSLIEN 158
Query: 61 NRIDEIGLIVIDEFHMLNEP-QRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFI 119
R+ +GL+V+DE HML E RG LE ++KV++ QI MSAT+ NI L F+
Sbjct: 159 KRMASVGLVVVDELHMLGEGGSRGSTLETTITKVMHQSAGTQIIGMSATLNNIKDLQKFL 218
Query: 120 EGITYVENSRPTKHSEYVTVDKRVFQ-------SFDGKSLTEIYADNLDYSLTGSGPDAV 172
+ + RP + EYV +D +++ D L + + PD +
Sbjct: 219 SAQVFSNDFRPVQLKEYVKLDDGIYEVNSSALCPEDQLQLVRAISYKCSKEMKLRDPDQI 278
Query: 173 LHLVQGNL---MVLIFCSSKIACSNLA--LRLQFDRFPGTKEYKKQEKEDLIEALKEEND 227
+ LVQ + L+FC +K C N+A L RF ++ E++ L++ L +E
Sbjct: 279 VALVQEVVPQHSCLVFCPTKKNCENVAELLSCFLPRF--VLDHLAPERKLLLKQLVQEGS 336
Query: 228 GKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVI 287
G+L L I +G+AYHH+ LTA ERR IE+AY G L ++ CTSTLAAGVNLPA+RV+
Sbjct: 337 GELCRVLRRTIPFGIAYHHSGLTADERRAIEDAYSDGVLCVLACTSTLAAGVNLPAKRVV 396
Query: 288 IRDSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISS 347
+R YV F+S N YKQMVGRAGR G+ SGES+++ + +D ++ ++M+ E S
Sbjct: 397 LRSPYVADTFLSRNQYKQMVGRAGRAGIDSSGESVLILQR-KDKVKLANMLIGPNEQCCS 455
Query: 348 HM---DPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQLKSPEDQQTFLETTLSEIVA 404
+ L L+L + + +S + VK I+ TL + Q++ L+ L +
Sbjct: 456 SLLYESHKGLRSLLLSTIGLKITASTQSVKAFIQRTLCF------IQRSQLKVDLLQNAE 509
Query: 405 SLLASKGTM--LTMNEAGHLSLTSIAKAAVQA---------GLSHDVCLI---------- 443
+ L M +T L T + +A + G C +
Sbjct: 510 NALQRLHEMGLITQKTPDSLETTRLGQAVFKGKCSVEYFLYGRHPGACWVAGGVDIEFGS 569
Query: 444 -IYSDLLHNKLNFCLLNSLHMLFLVIP---LEYRIPSDGILLSRSKVYDRYTKFHPQTLR 499
+YSDL + L N LH++FLV P L P+ + + D F LR
Sbjct: 570 QLYSDLKRGLESLVLSNHLHLIFLVTPYDRLNAFTPNWNVYM------DMMYSFDENELR 623
Query: 500 VAEALGVTENLVALNVTGK--LKDEKKALLCRFFHACILYDVLNFDNHQKVAKMYGIQNS 557
VA +G++E + + K+ +A++ RF+ + ILY++ + V++ + +
Sbjct: 624 VASMIGISEGYIVNKAACQRTRKNVNEAVVRRFYASLILYELWQQKSIWDVSRKFSVPRG 683
Query: 558 HLQNFLNVTSYFASKVYRFCEELPELWCYKQLLTDLPQTLMYCRAPNLRALMDLPGVKIG 617
+Q L + FAS V FC+EL ELW Y++LL + L YC L L+++PGVKI
Sbjct: 684 QIQQLLTSAASFASCVLHFCQELEELWSYQELLAVFVKRLSYCVTAELIPLVEIPGVKIA 743
Query: 618 RARQLLNAGYSSLELIARADAKEMVAKIRHLPLRSARNLISAAKLHFITKMDKVEAMKNL 677
RA+QL G+ +L+ IA + +V + HL ++A+ +I +A+ + ++ EA++
Sbjct: 744 RAKQLFQGGFKTLQQIASTEPHALVNCVEHLSHKAAKQIIISAQ---VLLTERAEALREE 800
Query: 678 IQNLQ 682
+ ++
Sbjct: 801 AEGME 805
>gi|339257148|ref|XP_003369944.1| putative DEAD/DEAH box helicase [Trichinella spiralis]
gi|316965512|gb|EFV50215.1| putative DEAD/DEAH box helicase [Trichinella spiralis]
Length = 923
Score = 350 bits (899), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 234/717 (32%), Positives = 371/717 (51%), Gaps = 54/717 (7%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V EK + L + +F +EEYA KG+ PP KR+ KKS+Y+ TIEK L+ SL +
Sbjct: 189 IVQEKVKGLLPLGLDLEFLVEEYASNKGRIPPIKRR-RKKSVYVSTIEKAQALVNSLFES 247
Query: 61 NRIDEIGLIVIDEFHMLN-EPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFI 119
+I +GL+++DE H++ RG LE ++SK+LY ++ Q+ +SAT+ N+ L+TF+
Sbjct: 248 KKIGNLGLVIVDELHLIGVGGNRGAALEQLISKLLYCAQNCQLIGISATLSNLEDLTTFL 307
Query: 120 EGITYVENSRPTKHSEYVTVDKRVFQSFDG----KSLTEIYA--------------DNLD 161
+ + N RP +EYV V+ +++ SL E Y L
Sbjct: 308 KADLFTANFRPVSLTEYVKVENILYKVNSNINCRDSLLEFYRHLPTAVQILSAFIDKYLK 367
Query: 162 YSLTGSGPDAVLHLVQ---GNLMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDL 218
+ PD + LV + L+FC +K + N+ + L ++K +EK L
Sbjct: 368 LTQKSRDPDNLSFLVNEVIPSASCLVFCPTKKSAENVCIMLSQTLPSELTDHKSKEKRKL 427
Query: 219 IEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAG 278
+E + EE KL + + CI YG+AYHH+ LT ERRLI++A+L GTL ++CCTSTLAAG
Sbjct: 428 LEDMLEECGRKLCSIQKRCIPYGLAYHHSGLTTDERRLIQDAFLEGTLCVLCCTSTLAAG 487
Query: 279 VNLPAQRVIIRDSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMM 338
VNLPA+RVI+R +G I Y QM GRAGR GL +SGES+ + + Q +
Sbjct: 488 VNLPAKRVILRSLTIGNRPIMKQEYTQMTGRAGRAGLDDSGESVTVIQRNQKDQLEELLT 547
Query: 339 NAGPEPISSHMDP--PTLVDLILEVVAANLCSSLEDVKTLIKHTLFY-QLK-----SPED 390
N + SS MD L +L+L ++ + S D+ K TLFY Q K SP D
Sbjct: 548 NVTEQCRSSLMDDNGRGLKNLLLSIIGLEMICSKADLIAFFKKTLFYIQFKNSSEISPTD 607
Query: 391 QQTFLETTLSEIVAS---LLASKGTMLTMNEAGHLSLTSIAKAAVQAGLSHDVCLIIYSD 447
E +L +V L+ K +++ + +T+ KA ++G+ + +YSD
Sbjct: 608 ---LFEDSLRYLVNEGFILINRKNKTTFSSDSIVVQITNFGKAVCKSGIDIQISKQVYSD 664
Query: 448 LLHNKLNFCLLNSLHMLFLVIPLEYRIPSDGILLSRSKVYDRYTKFHPQTLRVAEALGVT 507
L + L LH+++ IP + + + +S Y+ Y K +++ EA G+
Sbjct: 665 LTIASQSMMLTTRLHLIYCSIPYTNQ---EELNISWDAFYNEYNKLDKCEMKMLEAFGID 721
Query: 508 ENLVALNVTGKLKDEKKAL----LCRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFL 563
+ G + K L L R + A IL + N N VA + + ++Q+ +
Sbjct: 722 MCYIIKRKQG-IAASKDLLNLSTLNRVYAALILRQIWNQHNLWDVAAAFAVSRGYIQHLI 780
Query: 564 NVTSYFASKVYRFCEELPELWCYKQLLTDLPQTLMYCRAPNLRALMDLPGVKI------G 617
+ FAS + RFCE++ +LW K LL+D + L YC L LM++ GV+
Sbjct: 781 QSAASFASSLLRFCEQMEDLWALKSLLSDFSRALAYCVRAELVPLMEIQGVQKMTVLLQA 840
Query: 618 RARQLLNAGYSSLELIARADAKEMVAKIRHLPLRSARNLISAAKLHFITKMDKVEAM 674
RA QL NAG++++ +AR+D +++ + HL ++ A +IS+AK+ +KVEA+
Sbjct: 841 RALQLYNAGFTTVASVARSDVLTLISSVDHLSMKQAAQMISSAKMIL---NEKVEAL 894
>gi|156394395|ref|XP_001636811.1| predicted protein [Nematostella vectensis]
gi|156223918|gb|EDO44748.1| predicted protein [Nematostella vectensis]
Length = 771
Score = 347 bits (891), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 242/711 (34%), Positives = 374/711 (52%), Gaps = 46/711 (6%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V EK +++ + A E F +EEYAG KG++PP KR+ K+++YI TIEK + L+ SLI+E
Sbjct: 78 IVQEKVKTITQFAVELGFVVEEYAGSKGKFPPRKRR-TKRALYIATIEKANSLVNSLIEE 136
Query: 61 NRIDEIGLIVIDEFHMLNEPQ-RGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFI 119
R+D++GLIV+DE HML E RG LE ++K L+ IQI MSAT+ NI L F+
Sbjct: 137 KRMDDLGLIVVDELHMLGEGGGRGATLEMCLAKTLFSTNHIQIVGMSATLSNIGDLQKFL 196
Query: 120 EGITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVL-----H 174
Y + RP + EYV VD V++ S +E + G PD H
Sbjct: 197 MAEVYSNDFRPVELQEYVKVDNIVYKVPCSSSKSEADEIYVQVRRIGHSPDQRHIKDPDH 256
Query: 175 LVQGNLMV------LIFCSSKIACSNLALRLQFDRFPG-TKEYKKQEKEDLIEALKEEND 227
LV L V LIFC++K C N+A +L + P + K E+ +L++AL + +
Sbjct: 257 LVPLVLEVIPQHSCLIFCATKKNCENVA-KLMVEFLPREMTQVKIGERMELLQALHHQAN 315
Query: 228 GKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVI 287
G L L++ + YG+AYHH+ LT ER+LIE+AY G L + CTSTLAAGVNLPA+RVI
Sbjct: 316 G-LCPVLKKSVPYGIAYHHSGLTMDERKLIEDAYSQGVLCALTCTSTLAAGVNLPAKRVI 374
Query: 288 IRDSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISS 347
+R Y+GR+ I + YKQM+GRAGR G+ +GESI++ KT D + + + + + S
Sbjct: 375 LRAPYIGRNIIRKSQYKQMIGRAGRAGIDSTGESILIIKTT-DKHKVAPLFSGEFDSCQS 433
Query: 348 ---HMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLF-YQLKSPEDQQTFLETTLSEIV 403
+ + L L L ++ +C + ++ + + TL QL D L +V
Sbjct: 434 SLPYQEYKGLRTLFLTLLGLKICQTKSELVSFLSRTLMAIQLGDSFDADQHATEALRTLV 493
Query: 404 ASLLASKGTMLTMN--EAGHLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSL 461
S G + ++ E + +T + +A + L D +YS++ L N L
Sbjct: 494 -----SLGHVKAVDDCEDHKIEITPLGRATYKGSLDIDDTPSVYSEIKRAMGAMVLTNEL 548
Query: 462 HMLFLVIPLEYRIPSDGILLSRSKVYDR-YTKFHPQTLRVAEALGVTENLVALNVTGKLK 520
H+L+L PL+ G + Y R P+ + A +GVT+ L + G+
Sbjct: 549 HLLYLTTPLD----QGGTIQPDWMAYQREVATLGPEEQKAAGHIGVTD----LYLLGRAY 600
Query: 521 DEK-------KALLCRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKV 573
K + ++ RF+ + +LY ++ + V+ ++ + +QN L + +AS +
Sbjct: 601 GRKLTKCPVGEEVVHRFYLSLMLYKLMQGSSMWHVSSVFQVSRGFVQNLLTSAASYASCL 660
Query: 574 YRFCEELPELWCYKQLLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELI 633
RF E E W K LL + + L Y L LM++ GVK RARQL AGY +L +
Sbjct: 661 VRFTEA-KEFWTIKLLLEAMVRKLSYTTHLELIPLMEVAGVKQARARQLYKAGYRNLSDL 719
Query: 634 ARADAKEMVAKIRHLPLRSARNLISAAKLHFITKMDKV-EAMKNLIQNLQK 683
A A+ +V +I HLP + A+ ++SAAK+ K D + E ++L+ K
Sbjct: 720 AWAEPAVLVQQIEHLPKKHAQQIVSAAKMLLNEKADALREEAEDLVNGPAK 770
>gi|170573699|ref|XP_001892566.1| Type III restriction enzyme, res subunit family protein [Brugia
malayi]
gi|158601798|gb|EDP38603.1| Type III restriction enzyme, res subunit family protein [Brugia
malayi]
Length = 845
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 233/685 (34%), Positives = 363/685 (52%), Gaps = 24/685 (3%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+ EK SL+ ++F +EEYA KG+ PP K + ++S+Y+ TIEK + LI SLI+
Sbjct: 163 IAQEKVYSLSLFEDKFNICIEEYAASKGRLPPIKHR-KRESVYVATIEKANLLINSLIEV 221
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIE 120
+RIDEIG++V+DE HM+ E RG I+E + K + K + QI MSAT+ N+ L+ F+
Sbjct: 222 DRIDEIGVLVVDELHMIGENIRGAIIEQGLIKFMQ-KGTGQIVGMSATLSNVEQLAKFLN 280
Query: 121 GITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHL---VQ 177
+ RP K E V +D ++ G L E+ + + L PD ++ L +
Sbjct: 281 AAVFSTKFRPVKLIEKVKIDNSLYVIQPGGEL-ELEMNLGENKLKNRDPDGLVPLLYDIV 339
Query: 178 GNLMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEEC 237
VLIFC +K C N+ L + +E KK E+ +++ALK E DG+ + LE
Sbjct: 340 PRRSVLIFCPTKKNCENVCKMLSYLMPKSFRERKKTERLAIVKALKNEEDGEFPSLLELS 399
Query: 238 ILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGRDF 297
I GVAYHH+ LTA ER++IE AY G + IICCTSTLAAGVNLPA+RVII VG++
Sbjct: 400 ITRGVAYHHSGLTADERKIIEGAYQDGIISIICCTSTLAAGVNLPARRVIINAPLVGKES 459
Query: 298 ISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPI--SSHMDPPTLV 355
+ Y QM+GRAGR G + GE++ + ++ + +F M+ GP P SS +P
Sbjct: 460 LRKAQYLQMIGRAGRAGYDDMGEAVTVVRSSYEESKFLDMIK-GPLPRCNSSLNEPAVFS 518
Query: 356 DLILEVVAANLCSSLEDVKTLIKHTLFYQLKSPEDQQTFLETTLSEIVASLLASKGTMLT 415
+L++++ + LE+++ L++ TLF Q + E L E++ L+ +++
Sbjct: 519 SFLLDLISLKVAQRLEELEVLVQQTLF------GIQNSGSEKLLREMLEYLI--NHDLVS 570
Query: 416 MNEAGHLSLTSIAKAAVQAGLSHDVCLIIYSDLLHN-KLNFCLLNSLHMLFLVIPLEYRI 474
++ G+ S + A A LS V + + L +N K L + H+LF+++P + +
Sbjct: 571 VDGNGNYSASLFGMAVFSAPLSPLVARQMCTLLSNNIKEGIVLSSHFHLLFMMVPFDISV 630
Query: 475 PSDGILLSRSKVYDRYTKFHPQTLRVAEALGVTENLVALNVTGKLKDEKKALLCRFFHAC 534
D + Y+ Y + LGV + + + K + R + +
Sbjct: 631 DIDWNIF-----YEEYKALPRSEQALLARLGVNDKQLVRCFIDQPKLNEGESPLRLYISF 685
Query: 535 ILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELWCYKQLLTDLP 594
+L+ + + VA+ + + LQN L T AS + RF E+LP W K LL DL
Sbjct: 686 MLHRLWKQETFFDVAERFHVSRGWLQNVLQATCSQASSITRFSEKLPSFWSLKNLLPDLV 745
Query: 595 QTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIARADAKEMVAKIRHLPLRSAR 654
Q L C L L+ L GVK GRARQL NAG+ ++ IA D +++ I HL R A
Sbjct: 746 QHLRDCSQQELIPLLALDGVKRGRARQLYNAGFKTIGSIASTDPLVLLSTIDHLNRRQAN 805
Query: 655 NLISAAKLHFITKM-DKVEAMKNLI 678
+I +AK+ ++ +KVE ++ I
Sbjct: 806 AIIRSAKVLLRDQLAEKVEELQEQI 830
>gi|321466793|gb|EFX77786.1| hypothetical protein DAPPUDRAFT_320958 [Daphnia pulex]
Length = 968
Score = 346 bits (887), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 224/683 (32%), Positives = 371/683 (54%), Gaps = 23/683 (3%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V EK ++L+ A F +EEYAG +G YPP KR+ +K+ IYI T+EK + ++ SL++
Sbjct: 257 IVQEKIRTLSSLAIALNFAVEEYAGNRGSYPPRKRK-SKRVIYIATLEKANGIVNSLLEL 315
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIE 120
R++EIGL+V+DE H++ E +RG LE ++ K+L ++ AMSATIGNI+ LS F++
Sbjct: 316 GRLNEIGLVVVDEIHIVGEGKRGATLETLLCKLLLAPVGPRLVAMSATIGNIDELSNFLK 375
Query: 121 GITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDA--------- 171
Y E+ RP + E++ +V + G+ + +N + + S P A
Sbjct: 376 AEIYTEDFRPVQLREFIKTGDQVLE-VSGRQ--RGFQENFKHCRSLSSPSAESRKNDPDG 432
Query: 172 ---VLHLVQGNLMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDG 228
++ V L+FCS+K C ++A + + P ++K EK L AL++E+ G
Sbjct: 433 ISVLVSEVAPEHCCLVFCSTKKNCESVAKLISSNLSPNLLQWKTAEKLKLRRALEQES-G 491
Query: 229 KLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVII 288
+L L+ + +G+AYHH+ LTA ER+LIEEA+ +GTL +CCTSTLAAGVNLPA+RVI+
Sbjct: 492 RLCPILKSTLPFGIAYHHSGLTADERQLIEEAFSSGTLCCLCCTSTLAAGVNLPARRVIL 551
Query: 289 RDSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSH 348
R Y+G ++ Y+QM+GRAGR G GES M+ K + + ++ A + S
Sbjct: 552 RSPYIGNTRLTRARYQQMIGRAGRAGFDTHGESFMIVKPNELTFVTNDILMAPTNRVDSQ 611
Query: 349 MDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQ--LKSPEDQQTFLETTLSEIVASL 406
+ L L +++ + + TL + L +QT T L +
Sbjct: 612 LAEDNLRGLQQLLLSLISLDLGGRDRKTLAETLLHSTLLGQQSTRQTITATELVDQGLKS 671
Query: 407 LASKGTMLTMNEAGHLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFL 466
+A K +L + L +T + +A ++ + D +Y+DL + L+ LH+++L
Sbjct: 672 MAEKNLIL-FGKDEKLEVTKLGRATLKGIVDLDRSKQLYNDLRLAQAGLVLMTKLHLMYL 730
Query: 467 VIPLEYRIPSDGILLSRSKVYDRYTKFHPQTLRVAEALGVTENLVALNVTGKLKDEKKAL 526
V P + ++ S + + K + L VA +G+ E ++ ++ + ++++
Sbjct: 731 VTPYDM---VGTVMPIASTYFQSFNKLSAEELGVARTIGINETVMVKLMSNQQPKIERSV 787
Query: 527 LCRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELWCY 586
L RF+ +L D+ ++ V+++YG +QN L+ S FAS V+ F +EL E W +
Sbjct: 788 LERFYLTLMLNDLFKGESVWNVSELYGCTRGDVQNLLSSASSFASCVFHFVQELDEFWAF 847
Query: 587 KQLLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIARADAKEMVAKIR 646
LL + L C L LM+LP V GRAR L AG+ +L +A+ + +E+V+++
Sbjct: 848 SDLLLPFSRELSMCCTAELIPLMELPSVGKGRARMLFKAGFRTLTDVAKTNPEELVSRVD 907
Query: 647 HLPLRSARNLISAAKLHFITKMD 669
HLP RSA +I+AAK+ K D
Sbjct: 908 HLPKRSALQMIAAAKVLVYEKAD 930
>gi|170049318|ref|XP_001855268.1| DNA polymerase theta [Culex quinquefasciatus]
gi|167871133|gb|EDS34516.1| DNA polymerase theta [Culex quinquefasciatus]
Length = 1224
Score = 340 bits (873), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 246/750 (32%), Positives = 376/750 (50%), Gaps = 100/750 (13%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+ EK +LA A + F +EEY+G KG PP KR+ +K SI++CTIEK L+ LI+
Sbjct: 499 IAQEKLAALAPFAVDLAFLVEEYSGGKGAIPPRKRK-HKNSIFVCTIEKALVLMDGLIEV 557
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIE 120
+R +E+GLIVIDE HM+ E +RG LE +++KV ++ IQ+ MSATIGN++ ++ F+E
Sbjct: 558 DRANEVGLIVIDELHMIGEDRRGVHLEVLLTKVKAIQAGIQVVGMSATIGNLDEIARFME 617
Query: 121 GITYVENSRPTKHSEYVTVDKRVFQ-SFDGKSLTEIYA--DNLDYSLTGS----GPDAVL 173
Y + RP + EYV +F+ + ++L E + +D+ T PD V+
Sbjct: 618 ADIYCRDFRPVELQEYVKCGMDLFEINTKARTLEEAFKTKKEVDFGYTEEQRRVDPDHVI 677
Query: 174 HLVQGNLMV---LIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKL 230
LV + L+FC +K C L L D P +E L+ KE
Sbjct: 678 ALVTDVIPTKSCLVFCPTKRQCEQLCT-LMTDCLP---------RELLLHRTKEHL---- 723
Query: 231 STNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRD 290
L L G+AYHH+ L+ ER++IE+AY G L +I CTSTLAAGVNLPA+RVIIR
Sbjct: 724 ---LASAFLLGIAYHHSGLSFDERKMIEDAYRLGILSLIICTSTLAAGVNLPAKRVIIRS 780
Query: 291 SYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDF-----LRFSSMMNAGPEPI 345
++ +F +L+ YKQM GRAGR GL E GESI++C+ +D L S M +A
Sbjct: 781 PFIATNFTTLSRYKQMAGRAGRAGLGEPGESILICQK-KDIGAVCNLLCSPMDDANS--- 836
Query: 346 SSHMDPPT-LVDLILEVVAANLCSSLEDVKTLIKHTL-----------FYQL-------- 385
S H D L +LIL + LCS+ DV+ + TL QL
Sbjct: 837 SLHTDNGNYLKNLILSSIGLGLCSTRNDVQKFMAKTLLALQAERLGVDLRQLTDRTLQTL 896
Query: 386 --------------KSPEDQQ-TFLETTLSEIVAS-----------LLASKGT------M 413
K+P + F ET S+ + +KGT +
Sbjct: 897 YKENAINAKSDGCKKTPVNMTIRFDETESSQAEPANESAQIHELHVTRGAKGTSDEGKLV 956
Query: 414 LTMNEAGHLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEYR 473
TM + L + + KAA++AG D Y ++ +L+ H+L++++
Sbjct: 957 KTMKKNTRLVINELGKAAIRAGFHMDKARRFYDEMERIGERLNVLDQYHLLYVIV----- 1011
Query: 474 IPSDGILLSRSKVYDRYTKF--HPQTLRVAEALGVTENLV-ALNVTGKLKDEKKALLCRF 530
+ DG L + Q L A+ V E V ++ + + + + RF
Sbjct: 1012 LEDDGTLRPTDADLKAFVALIQQEQRLAFAQRFHVGEITVQKMSSCIRFPSDLRNTVNRF 1071
Query: 531 FHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELWCYKQLL 590
F I+ ++ + Q+VA+ Y + +Q + + AS + R E+LP+LW Y+QLL
Sbjct: 1072 FRMTIVSELWDLVPPQRVARKYKLDAGSVQQLMTNVASTASGLLRMTEQLPKLWAYRQLL 1131
Query: 591 TDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIARADAKEMVAKIRHLPL 650
+ Q L +C L LM+LPGVKI RA+QL AG++SL IA A + ++V + ++
Sbjct: 1132 ATMTQRLSHCCTIELLPLMELPGVKIARAKQLWRAGFTSLASIAAAKSSDLVTMVEYMNH 1191
Query: 651 RSARNLISAAKLHFITKMDKVEAMKNLIQN 680
R+A LI AAK M++VE +++ +++
Sbjct: 1192 RNASQLIMAAKAKL---MEQVEELRDRVED 1218
>gi|312083560|ref|XP_003143912.1| hypothetical protein LOAG_08332 [Loa loa]
Length = 811
Score = 335 bits (859), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 229/688 (33%), Positives = 358/688 (52%), Gaps = 39/688 (5%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+ EK SL+ ++ +EEYA KG+ PP KR+ +SIY+ TIEK + LI SLI+
Sbjct: 140 IAQEKVYSLSVFEDKLNVCVEEYAASKGRLPPIKRR-KGESIYVATIEKANMLINSLIEL 198
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIE 120
+RIDEIG++V+DE HM+ E RG I+E + K + ++ QI +SAT+ N+ LS F+
Sbjct: 199 DRIDEIGVVVVDELHMIGENTRGAIIEQGLIKFMQKGRTGQIIGLSATLSNVEQLSKFLS 258
Query: 121 GITYVENSRPTKHSEYVTVDKRVF-QSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGN 179
+ RP K E V +D ++ +GK E+ + L PD ++ L++
Sbjct: 259 AAVFSTKFRPIKLVEKVKIDNSLYIVQPEGKLEFEMCLG--ENKLRNRDPDGLVPLLRDI 316
Query: 180 L---MVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEE 236
+ VLIFC +K C ++ + +E KK E+ ++ALK E DGK S+ LE
Sbjct: 317 VPKQSVLIFCPTKQNCESVCKAVSHLMPKNVRERKKTERLAAVKALKSEEDGKFSSLLEL 376
Query: 237 CILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGRD 296
I+ GVAYHH+ LTA ER++IE A+ G + IICCTSTLAAGVNLPA+RVII+ VG++
Sbjct: 377 SIMRGVAYHHSGLTADERKIIEGAFQDGIINIICCTSTLAAGVNLPARRVIIKAPLVGKE 436
Query: 297 FISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAG-PEPISSHMDPPTLV 355
I Y QM+GRAGR G + GE++ + + + +F M++ PE SS +P
Sbjct: 437 PIRKAQYLQMIGRAGRAGYDDIGEAVTIVHSGYEESKFLDMISGPLPECNSSLNEPVMFS 496
Query: 356 DLILEVVAANLCSSLEDVKTLIKHTLFYQLKSPEDQQTFLETTLSEIVASLLASKGTMLT 415
+L++++ +I+ TLF Q L E++ L +K ++
Sbjct: 497 SFLLDLISLK----------IIQQTLF------GIQNNNSGELLREMLEYL--TKHDLVN 538
Query: 416 MNEAGHLSLTSIAKAAVQAGLS----HDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLE 471
++ G+ S + A A LS +C ++ ++L L + H+LF+++P +
Sbjct: 539 IDTDGNYSASIFGTAVFSASLSPLLAPQMCTLLSNNLSE---GVVLSSHFHLLFMMVPFD 595
Query: 472 YRIPSDGILLSRSKVYDRYTKFHPQTLRVAEALGVTENLVALNVTGKLKDEKKALLCRFF 531
+ D + YD Y + LGV + + + K + R +
Sbjct: 596 INVDIDWDVF-----YDEYKALPRSEQTLLARLGVNDKQLVRCFIDRPKLNEGGSPLRLY 650
Query: 532 HACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELWCYKQLLT 591
+ +L+ + + VA+ + + LQN L T AS + RF E++P W + LL
Sbjct: 651 ISLMLHRLWKQETFSDVAERFHVTRGWLQNVLQATCSQASSIARFAEKIPSFWPLRNLLP 710
Query: 592 DLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIARADAKEMVAKIRHLPLR 651
DL Q L C L L+ L GVK GRARQL NAG+ ++ LIA AD +V+ I +L R
Sbjct: 711 DLVQHLRDCSQQELIPLLALDGVKRGRARQLYNAGFKTIGLIASADPSLLVSTIDYLNRR 770
Query: 652 SARNLISAAKLHFITKM-DKVEAMKNLI 678
A +I +AK+ ++ +KVE ++ I
Sbjct: 771 QANAIIRSAKVLLRDQLAEKVEELQEQI 798
>gi|322802015|gb|EFZ22552.1| hypothetical protein SINV_10687 [Solenopsis invicta]
Length = 966
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 236/685 (34%), Positives = 352/685 (51%), Gaps = 91/685 (13%)
Query: 7 QSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEI 66
QS+A A + F +EEYAG KG+YPP KR+ K SIYICTIEK L+ SLI+ R+ EI
Sbjct: 296 QSMAVLALKLGFLIEEYAGTKGRYPPVKRR-RKNSIYICTIEKALGLVNSLIETKRLSEI 354
Query: 67 GLIVIDEFHMLNEPQ-RGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYV 125
G+IV+DE H+L E RG LE +++K+++ I++ MSATIGN+ ++ F+ TY
Sbjct: 355 GIIVVDELHLLGESGGRGATLEGLLTKIIFFSDIIRVIGMSATIGNLMEIAQFLNADTYS 414
Query: 126 ENSRPTKHSEYVTVDKRVFQ-SFDGKSLTEIYADNLDYSLTGS----GPDAVLHLVQ--- 177
+N RP K +EYV ++ F+ + L + N DY T PD + L+
Sbjct: 415 QNFRPVKITEYVKCGNDMWVVDFNSEELLVDMSTN-DYKYTDDIAILDPDRIGGLIMEVI 473
Query: 178 GNLMVLIFCSSKIACSNLALRLQFDRFPGT-KEYKKQEKEDLIEALKEENDGKLSTNLEE 236
N LIFCSS+ C N+AL L P T +YK EK+ L+ ALK E L L++
Sbjct: 474 PNDSCLIFCSSRKNCENVALLLT-KILPKTLYDYKVNEKKTLLNALKTEEG--LCPILQK 530
Query: 237 CILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGRD 296
I +G+ YHH+ LT+ ERRL+E+A+ GTL +ICCTSTLAAGVNLPA+RVI+R Y+G
Sbjct: 531 TIKFGIVYHHSGLTSEERRLLEDAFREGTLCVICCTSTLAAGVNLPARRVILRSPYIGNQ 590
Query: 297 FISLNMYKQMVGRAGRTGLQESGESIMLCK-----TMQDFLRFSSMMNAGPEPISSHMDP 351
F++L+ YKQM+GRAGR G+ GESI++CK ++D L S M+ + D
Sbjct: 591 FLNLSRYKQMIGRAGRAGMGVLGESILICKQSEIGKVKDLL--VSQMDDSLSSLYVENDR 648
Query: 352 PTLVDLILEVVAANLCSSLEDVKTLIKHTLF---------------------------YQ 384
L +LIL + N+ S+ ++ L TL +
Sbjct: 649 G-LNNLILSAIQLNMASTRSELHKLTTATLLSIQQNRIGINLKAITDETITALLKCGVIK 707
Query: 385 LKSPEDQQTFLETTL------SEIVASLLASK--GTMLTMNEAGHLSLTSIAKAAVQAGL 436
+KS ++ T+ S V +L K T++ N+ L + +AA++ +
Sbjct: 708 VKSKDNNSHNCNVTVVIPSQESTCVENLPVKKEVKTIIFTNKT-EFQLCDLGQAALKGPI 766
Query: 437 SHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEY--------RIPSDGILLSRSKVYD 488
+Y DL + + L+++LH+L+LV P + I D ++L D
Sbjct: 767 DLKTAYALYEDLKTAQKHLILIDNLHLLYLVTPYDSISQITPVGSIYYDVVILFTFLYID 826
Query: 489 -------------RYTKFHPQTLRVAEALGVTENLVALNVTGKLKDE------KKALLCR 529
+ + ++VA LG+TE KL+D +K ++ R
Sbjct: 827 IANNVVIIYFIFFKIMELTESQMQVARLLGITE-----AAANKLRDGIIPKSVEKRVVDR 881
Query: 530 FFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELWCYKQL 589
F+ I++++ N VA+ Y I +Q+ LN S FA V RFC+ELPE W + ++
Sbjct: 882 FYVTLIVHELWNHHTVYSVAEKYQINRGIVQSLLNAVSMFAFSVVRFCQELPEFWAFTEI 941
Query: 590 LTDLPQTLMYCRAPNLRALMDLPGV 614
L + L YC L L++LP V
Sbjct: 942 LNMFSKKLSYCCPAELEKLIELPSV 966
>gi|359066602|ref|XP_002688448.2| PREDICTED: LOW QUALITY PROTEIN: helicase, POLQ-like [Bos taurus]
Length = 1087
Score = 332 bits (851), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 230/717 (32%), Positives = 370/717 (51%), Gaps = 50/717 (6%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V EK L+ E F++EEYAG KG++PP KR+ KKS+YI TIEKG L+ SLI+
Sbjct: 367 IVQEKISGLSSFGIELGFFVEEYAGSKGKFPPIKRR-EKKSLYIATIEKGHSLVNSLIET 425
Query: 61 NRIDEIGLIVI-------DEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNIN 113
R +GL+ + HM+ E RG ILE ++K+LY K+ QI MSAT+ N+
Sbjct: 426 GRNSSLGLLFTFILFFLISKLHMIGEGTRGAILEMTLAKILYTSKTTQIIGMSATLNNVE 485
Query: 114 ALSTFIEGITYVENSRPTKHS----------EYVTVDKRVFQSFDGKSLTEIYADNLDY- 162
L F++ Y RP + V ++++ + ++ L+Y
Sbjct: 486 DLQKFLQAEYYTSQFRPVCTXGLICYLSFLLHIIFVANVLYKNSENDEGGMTFSRLLNYK 545
Query: 163 ---SLTGSGPDAVLHLVQ---GNLMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKE 216
+L PD ++ LV + L+FC +K C N+A + ++K++EK+
Sbjct: 546 YSDTLKKMDPDHLVALVTEVIPSYSCLVFCPTKKNCENVAEMICKSLSKEYLKHKEKEKQ 605
Query: 217 DLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLA 276
++I+ LK + G L L I +GVAYHH+ LT+ ER+L+EEAY G L + CTSTLA
Sbjct: 606 EVIQNLKNVSGGNLCRVLRHTIPFGVAYHHSGLTSDERKLLEEAYSTGVLCLFTCTSTLA 665
Query: 277 AGVNLPAQRVIIRDSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSS 336
AGVNLPA+R+ R N YKQM+GRAG G+ +GESI++ + +D +
Sbjct: 666 AGVNLPARRLAAFPLQKLR-----NQYKQMIGRAGLAGIDSAGESILILQE-KDKQQVLQ 719
Query: 337 MMNAGPEPISSHMD---PPTLVDLILEVVAANLCSSLEDVKTLIKHTLF-YQLKSPEDQQ 392
+++ E SH+ + L L ++ + ++L+D+ + T F Q K ++
Sbjct: 720 LISKPLENCYSHLVQEFTKGIQTLFLSLIGLKIATNLDDIYRFMSGTFFGVQQKVLLKEK 779
Query: 393 TFLETTLSEI---VASLLASKGTMLTMNEA--GHLSLTSIAKAAVQAGLSHDVCLIIYSD 447
+ E T+ + L K TM E + +T + +A+ + + C I+Y D
Sbjct: 780 SLWEITMESLRYLTEKGLLQKDTMCGSKEEFQNNFHITKLGRASFKGTIDLAYCDILYRD 839
Query: 448 LLHNKLNFCLLNSLHMLFLVIPLEYRIPSDGILLSRSKVYDR-YTKFHPQTLRVAEALGV 506
L L + LH+++L P + D + +Y R + + P VA +GV
Sbjct: 840 LKKGLEGLMLESLLHLIYLTTPYDMASQCDPDWM----IYFRQFNQLSPAEQNVAALVGV 895
Query: 507 TENLVALNVTGKLKDEK--KALLCRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLN 564
+EN + +G+ +K K ++ R + + ILY +L N V++ + + ++Q+ L+
Sbjct: 896 SENFIGKKASGQAIRKKVDKNIVNRLYLSFILYTLLKETNIWSVSEKFNMPRGYIQSLLS 955
Query: 565 VTSYFASKVYRFCEELPELWCYKQLLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLN 624
+ F+S V FCEEL E W Y+ LL +L + L YC L LM++ GV GRARQL N
Sbjct: 956 AAAAFSSCVLHFCEELEEFWVYRALLGELTKKLTYCVKAELIPLMEVTGVLEGRARQLYN 1015
Query: 625 AGYSSLELIARADAKEMVAKIRHLPLRSARNLISAAKLHFITKMDKVEAMKNLIQNL 681
AGY SL +A A+ + ++ I HL R A+ ++S+AK+ +K EA++ ++ L
Sbjct: 1016 AGYKSLTHLANANPEVLIRTIDHLSRRQAKQIVSSAKMLL---HEKAEALQEEVEEL 1069
>gi|296486374|tpg|DAA28487.1| TPA: helicase, POLQ-like [Bos taurus]
Length = 1137
Score = 332 bits (850), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 230/717 (32%), Positives = 370/717 (51%), Gaps = 50/717 (6%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V EK L+ E F++EEYAG KG++PP KR+ KKS+YI TIEKG L+ SLI+
Sbjct: 417 IVQEKISGLSSFGIELGFFVEEYAGSKGKFPPIKRR-EKKSLYIATIEKGHSLVNSLIET 475
Query: 61 NRIDEIGLIVI-------DEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNIN 113
R +GL+ + HM+ E RG ILE ++K+LY K+ QI MSAT+ N+
Sbjct: 476 GRNSSLGLLFTFILFFLISKLHMIGEGTRGAILEMTLAKILYTSKTTQIIGMSATLNNVE 535
Query: 114 ALSTFIEGITYVENSRPTKHS----------EYVTVDKRVFQSFDGKSLTEIYADNLDY- 162
L F++ Y RP + V ++++ + ++ L+Y
Sbjct: 536 DLQKFLQAEYYTSQFRPVCTXGLICYLSFLLHIIFVANVLYKNSENDEGGMTFSRLLNYK 595
Query: 163 ---SLTGSGPDAVLHLVQ---GNLMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKE 216
+L PD ++ LV + L+FC +K C N+A + ++K++EK+
Sbjct: 596 YSDTLKKMDPDHLVALVTEVIPSYSCLVFCPTKKNCENVAEMICKSLSKEYLKHKEKEKQ 655
Query: 217 DLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLA 276
++I+ LK + G L L I +GVAYHH+ LT+ ER+L+EEAY G L + CTSTLA
Sbjct: 656 EVIQNLKNVSGGNLCRVLRHTIPFGVAYHHSGLTSDERKLLEEAYSTGVLCLFTCTSTLA 715
Query: 277 AGVNLPAQRVIIRDSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSS 336
AGVNLPA+R+ R N YKQM+GRAG G+ +GESI++ + +D +
Sbjct: 716 AGVNLPARRLAAFPLQKLR-----NQYKQMIGRAGLAGIDSAGESILILQE-KDKQQVLQ 769
Query: 337 MMNAGPEPISSHMD---PPTLVDLILEVVAANLCSSLEDVKTLIKHTLF-YQLKSPEDQQ 392
+++ E SH+ + L L ++ + ++L+D+ + T F Q K ++
Sbjct: 770 LISKPLENCYSHLVQEFTKGIQTLFLSLIGLKIATNLDDIYRFMSGTFFGVQQKVLLKEK 829
Query: 393 TFLETTLSEI---VASLLASKGTMLTMNE--AGHLSLTSIAKAAVQAGLSHDVCLIIYSD 447
+ E T+ + L K TM E + +T + +A+ + + C I+Y D
Sbjct: 830 SLWEITMESLRYLTEKGLLQKDTMCGSKEEFQNNFHITKLGRASFKGTIDLAYCDILYRD 889
Query: 448 LLHNKLNFCLLNSLHMLFLVIPLEYRIPSDGILLSRSKVYDR-YTKFHPQTLRVAEALGV 506
L L + LH+++L P + D + +Y R + + P VA +GV
Sbjct: 890 LKKGLEGLMLESLLHLIYLTTPYDMASQCDPDWM----IYFRQFNQLSPAEQNVAALVGV 945
Query: 507 TENLVALNVTGKLKDEK--KALLCRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLN 564
+EN + +G+ +K K ++ R + + ILY +L N V++ + + ++Q+ L+
Sbjct: 946 SENFIGKKASGQAIRKKVDKNIVNRLYLSFILYTLLKETNIWSVSEKFNMPRGYIQSLLS 1005
Query: 565 VTSYFASKVYRFCEELPELWCYKQLLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLN 624
+ F+S V FCEEL E W Y+ LL +L + L YC L LM++ GV GRARQL N
Sbjct: 1006 AAAAFSSCVLHFCEELEEFWVYRALLGELTKKLTYCVKAELIPLMEVTGVLEGRARQLYN 1065
Query: 625 AGYSSLELIARADAKEMVAKIRHLPLRSARNLISAAKLHFITKMDKVEAMKNLIQNL 681
AGY SL +A A+ + ++ I HL R A+ ++S+AK+ +K EA++ ++ L
Sbjct: 1066 AGYKSLTHLANANPEVLIRTIDHLSRRQAKQIVSSAKMLL---HEKAEALQEEVEEL 1119
>gi|268575988|ref|XP_002642974.1| Hypothetical protein CBG15258 [Caenorhabditis briggsae]
Length = 898
Score = 329 bits (843), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 215/686 (31%), Positives = 372/686 (54%), Gaps = 29/686 (4%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V EK SLA + F +EEYA KG++PP KR+ + S+Y+ TIEK + LI SLI +
Sbjct: 220 IVQEKISSLAPFEDAFGINIEEYASNKGRFPPIKRR-KRVSVYVATIEKANMLINSLITQ 278
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIE 120
N++D+IG++V+DE HM+ + RG ILE +++K LY K S QI MSAT+ NI+ L +
Sbjct: 279 NQLDQIGMVVVDELHMIGDGGRGAILEQLLAKFLY-KGSGQIVGMSATLPNIDDLQFALR 337
Query: 121 GITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNL 180
Y N RP + +E+V + + + Q +G L D +L + PD + L+ +
Sbjct: 338 SFVYSTNFRPVELAEFVKIGQTMHQVENGGDLKP-AGDLPTNNLKSTDPDGICQLLAKLI 396
Query: 181 ---MVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEA-LKEENDGKLSTNLEE 236
+IFC +K C N+A+ + ++ K+ E E +++ L + +D ++ +L++
Sbjct: 397 PKSSAVIFCPNKKNCENVAVLIAKTLPAHIRQAKRAESEAFLQSYLTDNDDERMDADLKQ 456
Query: 237 CILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGRD 296
CIL GVAYHH+ LT ER+ +E A++ G + ++C TSTLAAGVNLP +RVII+ VGR+
Sbjct: 457 CILSGVAYHHSGLTQDERKCVEAAFMEGLIYVVCATSTLAAGVNLPVRRVIIKCPMVGRE 516
Query: 297 FISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAG-PEPISSHMDPPTLV 355
+ Y QM GRAGR G G+ I + K ++ F M+ + P +SS +
Sbjct: 517 RLGKAQYLQMAGRAGRAGFDTKGDCITIVKQGEEERWFREMLKSDIPRCMSSLSSVEAMG 576
Query: 356 DLILEVVAANLCSSLEDVKTLIKHTLFYQLKSPEDQQTFLETTLSEIVASLLASKGTMLT 415
IL+++ + +LE+V ++++L+ +SP+ + +E +L + + LT
Sbjct: 577 SFILDMIVLKIAKNLEEVLLGVQYSLYAAQESPDKIRELVEKSLQRL------EEHRFLT 630
Query: 416 MNEAGHLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNS-LHMLFLVIPLEY-- 472
+ E ++ + + A AG + + +++DL+ + + +S H+LF++ P E
Sbjct: 631 I-EDREITPSDLGSAVFNAGFAPEEATRLHTDLISSLNQGVIFSSHFHLLFIITPYEQVC 689
Query: 473 RIPSDGILLSRSKVYDRYTKFHPQTLR-VAEALGVTENLVALNVTGKLKDEKKALLCRFF 531
I D LL +Y+ PQ+ R + G+ E + + ++ R +
Sbjct: 690 NINWDLFLL----LYNAL----PQSERKLLGECGLEEKFILEAIITRVDLIAGTTRMRLY 741
Query: 532 HACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELWCYKQLLT 591
A +L + N + +VA+ +G++ LQ L + A+ + +F E++ +W ++LL
Sbjct: 742 IALMLQKIWNHEPMFQVAERFGVEKGWLQATLQSSISQAASIAKFSEKITTMWPLRKLLP 801
Query: 592 DLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIARADAKEMVAKIRHLPLR 651
+L Q L P L LM + GVK RA L AGY ++ +IARA+ ++V ++ + L
Sbjct: 802 ELVQRLSEAAQPELLPLMTVDGVKKARAAILFKAGYKTVGMIARANPLKLVQELGTIRLA 861
Query: 652 SARNLISAAKLHFITKMDKVEAMKNL 677
A+++I++AK+ ++D E M+ L
Sbjct: 862 QAKSIINSAKMVLRDQVD--EKMEEL 885
>gi|341891947|gb|EGT47882.1| hypothetical protein CAEBREN_02542 [Caenorhabditis brenneri]
Length = 899
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 208/681 (30%), Positives = 359/681 (52%), Gaps = 29/681 (4%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V EK SLA + F +EEYA KG++PP KR+ + S+Y+ TIEK + LI SLI +
Sbjct: 219 IVQEKISSLAPFEDAFGINIEEYASNKGRFPPIKRR-KRVSVYVATIEKANMLINSLITQ 277
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIE 120
++D IGL+V+DE HM+ + RG ILE +++K L+ K QI MSAT+ NI+ L +
Sbjct: 278 GQLDRIGLVVVDELHMIGDGGRGAILEQLLAKFLF-KGCGQIVGMSATLPNIDDLKFALR 336
Query: 121 GITYVENSRPTKHSEYVTVDK---RVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQ 177
Y N RP + +E+V + + +V + D K ++ +NL S PD + L+
Sbjct: 337 SFVYSTNFRPVELTEFVKIGQTMHQVEEDGDLKPAGDLPVNNL----KSSDPDGICQLLA 392
Query: 178 GNL---MVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEA-LKEENDGKLSTN 233
+ +IFC +K C N+A+ + ++ K+ E E +++ L + +D ++
Sbjct: 393 KLIPKSSAVIFCPNKKNCQNVAVLIAKSLPAHIRQAKRAESELFLQSYLSDNDDERMDAT 452
Query: 234 LEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYV 293
L++CIL GVAYHH+ LT ER+ +E A++ G + ++C TSTLAAGVNLP +RVII+ V
Sbjct: 453 LKQCILSGVAYHHSGLTQDERKCVEAAFMEGLIYVVCATSTLAAGVNLPVRRVIIKSPMV 512
Query: 294 GRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAG-PEPISSHMDPP 352
GR+ + Y QM GRAGR G G+ I + K ++ F M+ + P +SS
Sbjct: 513 GRERLGKAQYLQMAGRAGRAGFDTKGDCITIVKQGEEERWFREMLKSEIPRCMSSLSTVE 572
Query: 353 TLVDLILEVVAANLCSSLEDVKTLIKHTLFYQLKSPEDQQTFLETTLSEIVASLLASKGT 412
+ IL+++ + S++++V ++++L+ +S E + +E+++ L
Sbjct: 573 AMSSFILDIIVLKIASNIDEVMRGVEYSLYAAQESSEKIRQVVESSVKR-----LEEHSF 627
Query: 413 MLTMNEAGHLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNS-LHMLFLVIPLE 471
+ T + ++ T + A AG + ++SDL+ + + +S H+LF++ P E
Sbjct: 628 ITTEAQTSTITPTDLGNAVFNAGFEPEEATRLHSDLMSSLNQGVIFSSHFHLLFIITPYE 687
Query: 472 Y--RIPSDGILLSRSKVYDRYTKFHPQTLRVAEALGVTENLVALNVTGKLKDEKKALLCR 529
I D LL Y ++ G+ E + + ++ R
Sbjct: 688 QMCNINWDLFLL-------MYNALPCSERKLLSECGLEEKFILEAIITRVDLAAGTPRMR 740
Query: 530 FFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELWCYKQL 589
+ A +L + N + VA+ +G++ LQ L + A+ + +F E++ +W ++L
Sbjct: 741 LYIALMLQKIWNHEPMYTVAERFGVEKGWLQATLQSSISQAASIAKFSEKIETMWPLRKL 800
Query: 590 LTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIARADAKEMVAKIRHLP 649
L +L Q L P L LM + G+K RA L AGY ++ +IARAD ++V ++ +
Sbjct: 801 LPELVQRLSEAAQPELIPLMSVDGIKKARAAILFKAGYKTVGMIARADPMKLVQELGTIR 860
Query: 650 LRSARNLISAAKLHFITKMDK 670
L A+++IS+AK+ ++D+
Sbjct: 861 LSQAKSIISSAKMVLRDQVDE 881
>gi|47210458|emb|CAF94327.1| unnamed protein product [Tetraodon nigroviridis]
Length = 969
Score = 324 bits (831), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 232/697 (33%), Positives = 370/697 (53%), Gaps = 60/697 (8%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V EK + LA E F +EEYAG KG++PP KR+ +K S+YI TIEK L+ SLI+
Sbjct: 274 LVQEKVRGLASFGLELDFMVEEYAGSKGKFPPLKRR-SKSSLYIATIEKAHSLVNSLIEA 332
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIE 120
R++ +GL+V+DE HML + RG ++E ++KVLY+ K+ QI MSAT+GNI L F+
Sbjct: 333 GRLENLGLVVVDELHMLGDGSRGAVIEMTLAKVLYMSKTTQIIGMSATLGNIRDLQEFLR 392
Query: 121 GITYVENSRPT-----------KHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGS-- 167
Y + RP+ + EYV + +++ + ++ L++ + S
Sbjct: 393 AENYTNDFRPSAAVLKVFSGQVQLQEYVKLQDTIYEVDPKEEECFRFSRVLNFKYSSSMQ 452
Query: 168 --GPDAVLHLVQGNL---MVLIFCSSKIACSNL-ALRLQFDRFPGTKEYKKQEKEDLIEA 221
PD ++ LV + L+FC +K C N+ L ++ + K+ +K+EK L+
Sbjct: 453 KLDPDHIIALVTEVIPKNSCLVFCPTKKNCENVVGLICKYLKEDFLKQ-RKEEKALLLRD 511
Query: 222 LKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNL 281
LKE +G + L I +G+AYHH+ LT+ ER+L+E+AY G L ++ CTSTLAAG+NL
Sbjct: 512 LKESGNGSMCPVLRRTIPFGLAYHHSGLTSEERKLVEQAYSDGVLCLLACTSTLAAGINL 571
Query: 282 PAQRVIIRDSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAG 341
PA+RVI+R YV DF+ + YKQMVGRAGR G+ GESI++ + +D S++ A
Sbjct: 572 PARRVILRSPYVATDFLKRSQYKQMVGRAGRAGIDSVGESILVLQD-KDTHMARSLVCAP 630
Query: 342 PEPISSHM---DPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQLKSPEDQQTFLETT 398
E S++ D L+ L+L ++ + +S++ V+ + TL Y + +Q + +
Sbjct: 631 TENCYSNLMRDDGKGLLSLLLSLIGLKITTSMDQVRAFLSGTLLYV----QQEQLCADRS 686
Query: 399 LSEIV---ASLLASKGTML-TMNEAGH-LSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKL 453
L E V LL +G + T GH L +T + +A + + ++Y DL L
Sbjct: 687 LWEAVQRCVQLLEDRGLITGTERSQGHPLQVTKLGRATYKGSVDLTYSKVLYQDLTKG-L 745
Query: 454 NFCLLNS-LHMLFLVIPLEYRIPSDGILLSRSK----VYDR-YTKFHPQTLRVAEALGVT 507
+ LLNS LH+ +LV P E +LS+ K Y R +T P R+ A+GV
Sbjct: 746 DGLLLNSYLHLAYLVTPYE--------MLSQCKPDWMTYLRQFTLLSPAEQRMTTAIGVP 797
Query: 508 ENLVALNVTGKL--KDEKKALLCRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNV 565
E+ + G+ KD ++ R + A +L+ +L N VA+ + + +Q L+
Sbjct: 798 ESFLVRQAAGQTVRKDIDLDVVKRMYLALVLFTLLKETNLWSVAEKFQLSRGFIQVLLSS 857
Query: 566 TSYFASKVYRFCEELPELWCYKQLLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNA 625
+S F S V F E + + + L YC L LM++ GV RA+QL NA
Sbjct: 858 SSAFCSCVLHFTESSAD---------RVTRRLSYCVTAELIPLMEVAGVLESRAKQLYNA 908
Query: 626 GYSSLELIARADAKEMVAKIRHLPLRSARNLISAAKL 662
GY + +A AD + I +L + A ++++A++
Sbjct: 909 GYKTPSHLASADPAVLSKTIENLYKKQAHQIVASARM 945
>gi|432953220|ref|XP_004085307.1| PREDICTED: helicase POLQ-like, partial [Oryzias latipes]
Length = 932
Score = 324 bits (831), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 223/681 (32%), Positives = 352/681 (51%), Gaps = 33/681 (4%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V EK + LA E F +EEYAG +G++PP +R+ N+ S+Y+ TIEK L+ SLI+
Sbjct: 265 LVQEKVRGLASLGLELDFLVEEYAGSRGRFPPVRRR-NRTSLYVATIEKAHSLVNSLIET 323
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIE 120
R++ +GL+V+DE HML E RG ++E V+KV +L K+ Q+ MSAT+GNI L F+
Sbjct: 324 GRLENLGLLVVDELHMLGEGSRGAVMEMTVAKVQHLSKNTQVIGMSATLGNIQDLQAFLR 383
Query: 121 GITYVENSRPTKHSEYVTVDKRVFQ----SFDGKSLTEIYADNLDYSLTGSGPDAVLHLV 176
Y + RP + E+V V+ +++ G + + S+ + PD ++ LV
Sbjct: 384 AELYSSDFRPVQLKEFVKVNDSIYEVDPTQESGFRFSRLLPFKYSSSMQKTDPDHIIALV 443
Query: 177 QGNL---MVLIFCSSKIACSNLA------LRLQFDRFPGTKEYKKQEKEDLIEALKEEND 227
+ LIFC +K C N+A L+ F R +++ EK L++ L++
Sbjct: 444 TEVIPAHSCLIFCPTKKNCENVAAMICKYLKGDFLR------HREAEKSRLLQDLQDGGG 497
Query: 228 GKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVI 287
G + L + YGVAYHH+ LT ERRL+EEA+ G L ++ CTSTLAAG+NLPA+RVI
Sbjct: 498 GSMCPVLRRTVPYGVAYHHSGLTTEERRLLEEAFSHGVLCLLGCTSTLAAGINLPARRVI 557
Query: 288 IRDSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLC----KTMQDFLRFSSMMNAGPE 343
+R YV +F+ YKQMVGRAGR G+ GES+++ ++ L S M N
Sbjct: 558 LRSPYVATEFLKRTQYKQMVGRAGRAGMDSVGESVLILQEKDRSAAKVLLCSPMENCYSR 617
Query: 344 PISSHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQLKSPEDQQTFLETTLSEIV 403
+ D L+ LIL ++ N+ +SL+ ++ ++ TL + L+ + +
Sbjct: 618 LLEE--DAKGLLTLILSLIGLNVAASLQQLQDFLQGTLLCVQQRRLCTDGGLQDAVLRCI 675
Query: 404 ASLLASKGTMLTMNEAGHLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHM 463
+L + A L +T + +AA + G+ C ++Y DL L + LH+
Sbjct: 676 HTLCSKDLITAADPHAATLQVTRLGRAAYKGGVDLTFCHLLYKDLSAGLEGLLLSSFLHL 735
Query: 464 LFLVIPLEYRIPSDGILLSRSKVYDR-YTKFHPQTLRVAEALGVTENLVALNVTGKL--K 520
L+LV P E +P +Y R +T +++ A+GV E+ VA G+ K
Sbjct: 736 LYLVTPYEL-VPQ---CSPNWMIYLRQFTSLSAAEQKMSAAIGVPESFVARKAAGQTVKK 791
Query: 521 DEKKALLCRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEEL 580
A R + A +L +L + VA+ + + +Q L+ + F S F EEL
Sbjct: 792 GVDAAQAQRLYLALVLLCLLKETSVWGVAERFQLSRGFVQTLLSSAAAFCSCALHFAEEL 851
Query: 581 PELWCYKQLLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIARADAKE 640
ELW ++ LL L Q L YC L LM++ GV L +AGY +L +A AD
Sbjct: 852 EELWPFRSLLAALTQRLTYCVKAELVPLMEVAGVMEXXXXXLYSAGYRTLTHLANADPAV 911
Query: 641 MVAKIRHLPLRSARNLISAAK 661
+ + +L + A ++++AK
Sbjct: 912 LSRTVENLYTKQAAMMVASAK 932
>gi|71995032|ref|NP_001022911.1| Protein HELQ-1, isoform a [Caenorhabditis elegans]
gi|351065833|emb|CCD61810.1| Protein HELQ-1, isoform a [Caenorhabditis elegans]
Length = 923
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 210/699 (30%), Positives = 367/699 (52%), Gaps = 35/699 (5%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V EK +LA + F +EEYA KG++PP KR+ + S+Y+ TIEK + LI SLI +
Sbjct: 225 IVQEKISALAPFEDAFGINIEEYASNKGRFPPIKRR-KRVSVYVATIEKANMLINSLITQ 283
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIE 120
++D +G++V+DE HM+ + RG ILE +++K LY K + QI MSAT+ NI+ L +
Sbjct: 284 GQLDRVGMVVVDELHMIGDGGRGAILEQLLAKFLY-KGTGQIVGMSATLPNIDDLKFALR 342
Query: 121 GITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNL 180
Y N RP + +E+V + + + Q + L D +L + PD + L+ +
Sbjct: 343 AFVYSTNFRPVELTEFVKIGQTMHQVSENGDLNPA-GDLPTNNLKSTDPDGICQLLAKLI 401
Query: 181 ---MVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEA-LKEENDGKLSTNLEE 236
+IFC +K C N+A+ + ++ K+ E + +++ L + +D ++ L++
Sbjct: 402 PKNSAVIFCPNKKNCENVAVLIAKTLPAHIRQAKRAESDAFLQSYLSDNDDERMDAVLKQ 461
Query: 237 CILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGRD 296
CIL GVAYHH+ LT ER+ +E A++ G + ++C TSTLAAGVNLP +RVII+ VGR+
Sbjct: 462 CILSGVAYHHSGLTQDERKCVEAAFMEGLIYVVCATSTLAAGVNLPVRRVIIKAPMVGRE 521
Query: 297 FISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAG-PEPISSHMDPPTLV 355
+ Y QM GRAGR G G+ I + K ++ F M+ + P +SS ++
Sbjct: 522 RLGKAQYLQMAGRAGRAGFDTKGDCITIIKAGEEERWFREMLKSDIPRCMSSLSSEESMG 581
Query: 356 DLILEVVAANLCSSLEDVKTLIKHTLFYQLKSPEDQQTFLETT--------------LSE 401
IL+ V L ++E++ T ++++LFY +SPE+ + +E++ L +
Sbjct: 582 SFILDCVVLKLAENIEEIMTAVRYSLFYAQESPENIRKLVESSVKRLEEHYFITIEPLEQ 641
Query: 402 IVASLLASKGTMLTMNEAGHLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNS- 460
VAS +++ + + G +S + + A AG D +++DL+ + + S
Sbjct: 642 DVASEPSAQASSIP-RVPGKISPSDLGNAVFNAGFDPDEATRLHADLVSSLNQGVIFASH 700
Query: 461 LHMLFLVIPLEY--RIPSDGILLSRSKVYDRYTKFHPQTLRVAEALGVTENLVALNVTGK 518
H+LF++ P E I D LL Y ++ G+ E + + +
Sbjct: 701 FHLLFIITPYEQVCNINWDLFLLM-------YNALPSSERKLLAECGLEEKFILEAIITR 753
Query: 519 LKDEKKALLCRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCE 578
+ R + A +L + N + VA+ +G++ LQ L + A+ + +F E
Sbjct: 754 VDLTAGTPRMRLYIALMLQKIWNHEPMYTVAERFGVEKGWLQATLQSSISQAASIAKFSE 813
Query: 579 ELPELWCYKQLLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIARADA 638
++ +W ++LL +L Q L P L LM + G+K RA L AGY ++ +IARA+
Sbjct: 814 KITTMWPLRKLLPELVQRLSEAAQPELLPLMTVDGIKKARAAILFKAGYKTVGMIARANP 873
Query: 639 KEMVAKIRHLPLRSARNLISAAKLHFITKMDKVEAMKNL 677
++V ++ + + A ++I++A++ ++D E M+ L
Sbjct: 874 LKLVQELGTIRMAQANSIIASARMVLRDQVD--EKMEEL 910
>gi|308481777|ref|XP_003103093.1| CRE-HEL-308 protein [Caenorhabditis remanei]
gi|308260469|gb|EFP04422.1| CRE-HEL-308 protein [Caenorhabditis remanei]
Length = 903
Score = 318 bits (816), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 214/687 (31%), Positives = 369/687 (53%), Gaps = 29/687 (4%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V EK SLA + F +EEYA KG++PP KR+ N+ S+Y+ TIEK + LI SLI +
Sbjct: 223 IVQEKISSLAPFEDAFGINIEEYASNKGRFPPIKRR-NRVSVYVATIEKANMLINSLITQ 281
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIE 120
+++ IG++V+DE HM+ + RG ILE +++K LY K QI MSAT+ NI+ L +
Sbjct: 282 GQLNRIGMVVVDELHMIGDGGRGAILEQLLAKFLY-KGCGQIVGMSATLPNIDDLQFALR 340
Query: 121 GITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNL 180
Y N RP + +E+V + + + Q LT D +L + PD + L+ +
Sbjct: 341 SFVYSTNFRPVELTEFVKIGQTMHQVTGDGELTPA-GDLPVNNLKSTDPDGICQLLAKLI 399
Query: 181 ---MVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDG-KLSTNLEE 236
+IFC +K C N+A+ + ++ K+ E E +E+ +ND ++ + L++
Sbjct: 400 PKSSAVIFCPNKKNCENVAVLIAKTLPAHIRQAKRAESEAFLESYLTDNDEERMDSVLKK 459
Query: 237 CILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGRD 296
CIL GVAYHH+ LT ER+ +E A++ G + ++C TSTLAAGVNLP +RVII+ VGR+
Sbjct: 460 CILSGVAYHHSGLTQDERKCVEAAFMEGLIYVVCATSTLAAGVNLPVRRVIIKCPMVGRE 519
Query: 297 FISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAG-PEPISSHMDPPTLV 355
+ Y QM GRAGR G G+ I + K ++ F M+ + P +SS ++
Sbjct: 520 RLGKAQYLQMAGRAGRAGFDTKGDCITIVKQGEEERWFREMLKSEIPRCMSSLSSLESMG 579
Query: 356 DLILEVVAANLCSSLEDVKTLIKHTLFYQLKSPEDQQTFLETTLSEIVASLLASKGTMLT 415
IL++V + S+L+++ ++++L+ +S ++ Q +E +L + + +T
Sbjct: 580 SFILDIVVLKIASNLKEIMRGVQYSLYAAQESMDNIQKLVEQSLKRL------EEHYFIT 633
Query: 416 MNE-AGHLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNS-LHMLFLVIPLEY- 472
++E G ++ + + A AG + D ++SDL+ + + +S H+LF++ P E
Sbjct: 634 IDETTGEITPSDLGNAVFNAGFAPDEATRLHSDLVSSLNQGVIFSSHFHLLFIITPYEQS 693
Query: 473 -RIPSDGILLSRSKVYDRYTKFHPQTLR-VAEALGVTENLVALNVTGKLKDEKKALLCRF 530
I D LL + + PQ+ R + G+ E + + ++ R
Sbjct: 694 CNINWDLFLLMYNAL--------PQSERKLLGECGLEEKFILEAIITRVDLIAGTPRMRL 745
Query: 531 FHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELWCYKQLL 590
+ A +L + N + VA+ +G++ LQ L + A+ + +F E++ +W ++LL
Sbjct: 746 YIALMLQKIWNHEPMYAVAERFGVEKGWLQTTLQSSISQAASIAKFSEKITTMWPLRKLL 805
Query: 591 TDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIARADAKEMVAKIRHLPL 650
+L Q L P L LM + G+K RA L AGY ++ +IARA ++V ++ + L
Sbjct: 806 PELVQRLSEAAQPELLPLMTVDGIKKARAGILFKAGYKTVGMIARACPLKLVQELGTIRL 865
Query: 651 RSARNLISAAKLHFITKMDKVEAMKNL 677
A+++I++AK+ ++D E M+ L
Sbjct: 866 AQAKSIIASAKMVLRDQVD--EKMEEL 890
>gi|195588631|ref|XP_002084061.1| GD14056 [Drosophila simulans]
gi|194196070|gb|EDX09646.1| GD14056 [Drosophila simulans]
Length = 1011
Score = 318 bits (815), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 225/715 (31%), Positives = 372/715 (52%), Gaps = 56/715 (7%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V EK +++ A + F +EEY KG+ PP R+ ++S++I +IEKG+ L+ SLI
Sbjct: 322 IVQEKVSAMSPFAIDLDFIVEEYTAGKGKCPPQPRR-KRRSLFIASIEKGAVLMDSLIDV 380
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIE 120
R EIGL+V+DE H++ E RG LE ++KV++L +IQI MSATIGN++ +S+F+
Sbjct: 381 QRPHEIGLVVVDELHLIGEKGRGATLEAFLTKVMFLNANIQIVGMSATIGNLSEISSFLN 440
Query: 121 GITYVENSRPTKHSEYVTVDKRVFQ-SFDGKSLTEIYAD------NLDYSLTGSGPDAVL 173
Y RP + EY+ + + + G++L EI+ N ++ + PD +
Sbjct: 441 ADVYTRGFRPVELKEYIKCGPDLLEINSAGQTLEEIFVPSRSVEYNYSEAVKRADPDHLA 500
Query: 174 HLVQ---GNLMVLIFCSSKIACSNLALRLQFDRFPGTK--EYKKQEKEDLIEALKEENDG 228
L+ L+FC S+ C N+AL L P K E+++ EK DL++AL ++ G
Sbjct: 501 GLISECAPEHCCLVFCPSRKNCENVALLLS-RIVPKHKFFEHRRSEKLDLMDAL-DKMCG 558
Query: 229 KLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVII 288
LS L + + YG+AYHH+ LT ER+ IE AY G + +ICCTSTLAAGVNLPA+R
Sbjct: 559 ILSPVLAKTLPYGIAYHHSGLTTDERKYIETAYRFGVVTVICCTSTLAAGVNLPAKRS-- 616
Query: 289 RDSYVGRDFISLNMYKQM--VGRAGRTGLQE-----SGESIMLCKTMQDFLRFSSMMNAG 341
+D+ + + M K + + + GLQ G ++ C+ + L S++++
Sbjct: 617 KDNLLVGQMLFSPMDKALSSLDQNEAVGLQSLILSVVGLNLAECRRDLNRLVNSTLLSVQ 676
Query: 342 PEPISSHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQLKSPEDQQTFLETTLSE 401
+ + +D +++L + ++ + K+ + QL P+ + + S+
Sbjct: 677 AKSLEVAVD-----EIVLRI-----------LREMFKNKVL-QLAEPQAKS---KINSSD 716
Query: 402 IVASLLASKGT------MLTMNEAGHLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNF 455
I+ S S+ L + ++ LT+I +AA +AG+ + I+ +L +
Sbjct: 717 IITSQDVSQANRPAGDRRLLIGQSTTFKLTNIGRAAFKAGIDYKRANAIHKELKQAQQQL 776
Query: 456 CLLNSLHMLFLVIPLEYRIPSDGILLSRSKV-YDRYTKFHPQTLRVAEALGVTENLVA-L 513
L N LH+L+LV+ D + + + + + YT + + + LG TE A L
Sbjct: 777 ILTNYLHLLYLVVCFNTNERGDELFPADASILFGVYTSLPLDSQAMFKQLGFTEAHAARL 836
Query: 514 NVTGKLKDEKKALLCRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKV 573
T ++ L R + IL D+LN VA Y ++ LQ+ ++ ++ AS +
Sbjct: 837 FKTQSVQGPLSLQLNRMYKVLILADILNLLPIPSVASKYNVERGTLQHLISQSTAAASAI 896
Query: 574 YRFCEELPELWCYKQLLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELI 633
R CEEL E WCYK L + + C L LM+LP VKI RARQL AG+ ++ I
Sbjct: 897 VRLCEELEEFWCYKPLFERILHKMDRCGTFELEPLMELPAVKINRARQLYAAGFQTIGDI 956
Query: 634 ARADAKEMVAKIRHLPLRSARNLISAAKLHFITKMD----KVEAMKNLIQNLQKN 684
AR ++V + H+PLR A ++SAAK+ + K+D + E +K+ ++ KN
Sbjct: 957 ARVRPSQLVQCLEHMPLRVATEIVSAAKIILMKKLDHLEEETENLKDCLKTSDKN 1011
>gi|83318174|gb|AAI09170.1| Hel308 protein [Mus musculus]
Length = 971
Score = 295 bits (755), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 191/546 (34%), Positives = 295/546 (54%), Gaps = 46/546 (8%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V EK SL+ E F++EEYAG KG++PP KR+ KKS+YI TIEK L+ +LI+
Sbjct: 350 IVQEKISSLSSFGIELGFFVEEYAGSKGRFPPIKRR-EKKSLYIATIEKAHSLVNALIET 408
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIE 120
+R+ +GL+V+DE HM+ E RG ILE ++KVLY K+ QI MSAT+ N+ L F++
Sbjct: 409 SRLSTLGLVVVDELHMICEGSRGAILEMTLAKVLYTSKTTQIIGMSATLNNVEDLQAFLK 468
Query: 121 GITYVENSRPTKHSEYVTVDKRVF----QSFDGKSLTEIYADNLDYSLTGSGPDAVLHLV 176
Y RP + E++ V+ ++ Q+ DG + + + + +L PD ++ LV
Sbjct: 469 AEYYTSQFRPVELKEFLKVNDTIYEVDSQAADGMTFSRLLSYKYSEALKKMDPDRLVALV 528
Query: 177 Q---GNLMVLIFCSSKIACSNLALRL-QFDRFPGTKEY---KKQEKEDLIEALKEENDGK 229
N L+FC SK C N+A L +F +K+Y +++EK ++I++L+ +GK
Sbjct: 529 TEVIPNYSCLVFCPSKKNCENVAEMLCKF----LSKDYLNHREKEKCEVIKSLRNIGNGK 584
Query: 230 LSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIR 289
+ L+ + +G+AYHH+ LT+ ER+L+EEAY G L ++ CTSTLAAGVNLPA+RVI+R
Sbjct: 585 VCPVLKRTVPFGIAYHHSGLTSEERKLLEEAYSTGVLCLLTCTSTLAAGVNLPARRVILR 644
Query: 290 DSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLC--KTMQDFLRFSSMMNAGP-EPIS 346
YV F+ N YKQMVGRAGR G+ +GESI+L K Q L S GP E
Sbjct: 645 APYVANTFLKRNQYKQMVGRAGRAGIDTAGESILLLQEKDKQQVLELIS----GPLETCC 700
Query: 347 SHMD---PPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQLKSPEDQQTFL--ETTLSE 401
SH+ + L L ++ + +SL D+ + T F QQ L E +L E
Sbjct: 701 SHLVEEFTKGIQALFLSLIGLKIAASLGDIYQFMSGTFFGV------QQKILLKEKSLWE 754
Query: 402 IVASLLA--SKGTMLTMNEAG-------HLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNK 452
I L ++ +L + G H +T + +A+ + + C +Y DL
Sbjct: 755 ITVDALEHLTEKGLLQKDSCGDNEGLECHFRITKLGQASFKGAIDLAYCDTLYRDLKKGL 814
Query: 453 LNFCLLNSLHMLFLVIPLEYRIPSDGILLSRSKVYDRYTKFHPQTLRVAEALGVTENLVA 512
L + LH+++L P + S+ + + ++ + P VA LGV+E+ +
Sbjct: 815 EGLVLESLLHLIYLTTPYDLAAQSEPDWMV---YFKQFGQLSPTEQNVAALLGVSESFIG 871
Query: 513 LNVTGK 518
G+
Sbjct: 872 KKAAGQ 877
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 42/69 (60%), Gaps = 3/69 (4%)
Query: 613 GVKIGRARQLLNAGYSSLELIARADAKEMVAKIRHLPLRSARNLISAAKLHFITKMDKVE 672
V+ GRA+QL NAGY S+ +A A+ + +V I HL R AR ++S+AK+ +K E
Sbjct: 878 AVRKGRAKQLYNAGYRSIMHLANANPEVLVKTIDHLSRRQARQIVSSAKMLL---HEKAE 934
Query: 673 AMKNLIQNL 681
A++ + L
Sbjct: 935 ALQGEAEEL 943
>gi|270002335|gb|EEZ98782.1| hypothetical protein TcasGA2_TC001346 [Tribolium castaneum]
Length = 1079
Score = 290 bits (741), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 161/336 (47%), Positives = 212/336 (63%), Gaps = 15/336 (4%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V EK +L+ A F +EEYA KG YPP KR+ K SIYI TIEK L+ SLI+
Sbjct: 342 IVQEKVWALSPFAVALDFLVEEYAASKGTYPPRKRR-RKNSIYIATIEKALGLLNSLIET 400
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIE 120
+RI+EIGLIV+DE H++ EP RG LE +++K++Y +IQ+ MSATIGN+N L F+
Sbjct: 401 DRINEIGLIVVDELHLVGEPGRGSTLEALLTKIMYTNANIQVVGMSATIGNVNDLCQFLN 460
Query: 121 GITYVENSRPTKHSEYVTVDKRVFQ-SFDGKSLTEIYADNLDYSLTGSG-----PDAVLH 174
Y +N RP + EYV V + ++ K +D+ SG PD +
Sbjct: 461 ADIYSQNFRPVELVEYVKCGPEVAKINYSPKDELLTVVRKIDHKYPSSGMNSLDPDKLGA 520
Query: 175 LV-----QGNLMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGK 229
LV +G+ LIFC+SK C N+A L +YKK+EKE + +LK+E G
Sbjct: 521 LVMEVVPEGS--CLIFCASKKNCENVASLLCKVVNKSLLDYKKEEKEQVKHSLKDEG-GS 577
Query: 230 LSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIR 289
L I G+AYHH+ LT ERR+IEEA+ AG + +ICCTSTLAAGVNLPA+RVI+R
Sbjct: 578 LCKIFNVSIQLGIAYHHSGLTNEERRVIEEAFRAGVISVICCTSTLAAGVNLPAKRVILR 637
Query: 290 DSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLC 325
YVGR+FISL+ YKQMVGRAGR GL E+GESI++C
Sbjct: 638 QPYVGREFISLSKYKQMVGRAGRAGLGETGESILIC 673
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/191 (34%), Positives = 105/191 (54%), Gaps = 3/191 (1%)
Query: 483 RSKVYDRYTKFHPQTLRVAEALGVTENLVALNVTGK--LKDEKKALLCRFFHACILYDVL 540
R+ Y+ + L+ A LG+ ++ VAL + +++ + +L RF+ +LYD+
Sbjct: 866 RNDYYNIFRTLGRNELQTARILGI-DDAVALRMLANQPIRNVPERVLNRFYLTLMLYDLW 924
Query: 541 NFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELWCYKQLLTDLPQTLMYC 600
N +V++ + + +Q+ + + FAS V FCE L E W + LL + Q L +C
Sbjct: 925 NETPVFEVSEKFQVNRGIVQHLMTGAATFASNVVHFCEGLEEFWTFAHLLNGMSQRLSHC 984
Query: 601 RAPNLRALMDLPGVKIGRARQLLNAGYSSLELIARADAKEMVAKIRHLPLRSARNLISAA 660
L LM LP VK RARQL NAGY S+ IA A+A +V I +LP R A+ LI+AA
Sbjct: 985 CVKELLPLMQLPAVKQSRARQLYNAGYKSIRSIAAANADSLVESIEYLPRRVAKQLIAAA 1044
Query: 661 KLHFITKMDKV 671
K+ + K++ +
Sbjct: 1045 KMLMLEKVENL 1055
>gi|189234951|ref|XP_973059.2| PREDICTED: similar to mutagen-sensitive 301 CG7972-PA [Tribolium
castaneum]
Length = 965
Score = 289 bits (739), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 161/336 (47%), Positives = 212/336 (63%), Gaps = 15/336 (4%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V EK +L+ A F +EEYA KG YPP KR+ K SIYI TIEK L+ SLI+
Sbjct: 228 IVQEKVWALSPFAVALDFLVEEYAASKGTYPPRKRR-RKNSIYIATIEKALGLLNSLIET 286
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIE 120
+RI+EIGLIV+DE H++ EP RG LE +++K++Y +IQ+ MSATIGN+N L F+
Sbjct: 287 DRINEIGLIVVDELHLVGEPGRGSTLEALLTKIMYTNANIQVVGMSATIGNVNDLCQFLN 346
Query: 121 GITYVENSRPTKHSEYVTVDKRVFQ-SFDGKSLTEIYADNLDYSLTGSG-----PDAVLH 174
Y +N RP + EYV V + ++ K +D+ SG PD +
Sbjct: 347 ADIYSQNFRPVELVEYVKCGPEVAKINYSPKDELLTVVRKIDHKYPSSGMNSLDPDKLGA 406
Query: 175 LV-----QGNLMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGK 229
LV +G+ LIFC+SK C N+A L +YKK+EKE + +LK+E G
Sbjct: 407 LVMEVVPEGS--CLIFCASKKNCENVASLLCKVVNKSLLDYKKEEKEQVKHSLKDEG-GS 463
Query: 230 LSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIR 289
L I G+AYHH+ LT ERR+IEEA+ AG + +ICCTSTLAAGVNLPA+RVI+R
Sbjct: 464 LCKIFNVSIQLGIAYHHSGLTNEERRVIEEAFRAGVISVICCTSTLAAGVNLPAKRVILR 523
Query: 290 DSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLC 325
YVGR+FISL+ YKQMVGRAGR GL E+GESI++C
Sbjct: 524 QPYVGREFISLSKYKQMVGRAGRAGLGETGESILIC 559
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/191 (34%), Positives = 105/191 (54%), Gaps = 3/191 (1%)
Query: 483 RSKVYDRYTKFHPQTLRVAEALGVTENLVALNVTGK--LKDEKKALLCRFFHACILYDVL 540
R+ Y+ + L+ A LG+ ++ VAL + +++ + +L RF+ +LYD+
Sbjct: 752 RNDYYNIFRTLGRNELQTARILGI-DDAVALRMLANQPIRNVPERVLNRFYLTLMLYDLW 810
Query: 541 NFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELWCYKQLLTDLPQTLMYC 600
N +V++ + + +Q+ + + FAS V FCE L E W + LL + Q L +C
Sbjct: 811 NETPVFEVSEKFQVNRGIVQHLMTGAATFASNVVHFCEGLEEFWTFAHLLNGMSQRLSHC 870
Query: 601 RAPNLRALMDLPGVKIGRARQLLNAGYSSLELIARADAKEMVAKIRHLPLRSARNLISAA 660
L LM LP VK RARQL NAGY S+ IA A+A +V I +LP R A+ LI+AA
Sbjct: 871 CVKELLPLMQLPAVKQSRARQLYNAGYKSIRSIAAANADSLVESIEYLPRRVAKQLIAAA 930
Query: 661 KLHFITKMDKV 671
K+ + K++ +
Sbjct: 931 KMLMLEKVENL 941
>gi|355694423|gb|AER99664.1| helicase, POLQ-like protein [Mustela putorius furo]
Length = 650
Score = 283 bits (725), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 177/494 (35%), Positives = 276/494 (55%), Gaps = 39/494 (7%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V EK L+ E F++EEYAG KG++PP KR+ KKS+YI TIEKG L+ SLI+
Sbjct: 167 IVQEKISGLSSFGIELGFFVEEYAGSKGKFPPIKRR-EKKSLYIATIEKGHSLVNSLIET 225
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIE 120
RI +GL+V+DE HM+ E RG ILE ++K+LY K+ QI MSAT+ N+ L F++
Sbjct: 226 GRIGSLGLVVVDELHMIGEGSRGAILEMTLAKILYTSKTTQIIGMSATLNNVEDLQEFLQ 285
Query: 121 GITYVENSRPTKHSEYVTVDKRVFQ----SFDGKSLTEIYADNLDYSLTGSGPDAVLHLV 176
Y RP + EY+ ++ +++ + +G + + + +L PD ++ LV
Sbjct: 286 AECYTSQFRPVELKEYLKINDAIYEVDNKAENGMTFSRLLNCQYSDTLKKMDPDHLVALV 345
Query: 177 Q---GNLMVLIFCSSKIACSNLA-LRLQFDRFPGTKEY---KKQEKEDLIEALKEENDGK 229
N L+FC +K C N+A + +F +KEY +++EK +LI+ LK + G
Sbjct: 346 TEVIPNYSCLVFCPTKKNCENVAEMICKFL----SKEYLKHREKEKHELIKNLKSISGGN 401
Query: 230 LSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIR 289
+ L+ + +GVAYHH+ LT+ ERRL+EEAY G L + CTSTLAAGVNLPA+RVI+R
Sbjct: 402 VCPILKRTVPFGVAYHHSGLTSDERRLLEEAYSTGALCLFTCTSTLAAGVNLPARRVILR 461
Query: 290 DSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHM 349
YV ++F+ + YKQM+GRAGR G+ GES+++ + +D + S +++ E SH+
Sbjct: 462 APYVAKEFLKRSQYKQMIGRAGRAGIDSVGESVLILQE-KDKQQVSELISRPLENCYSHL 520
Query: 350 D---PPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQLKSPEDQQTFL--ETTLSEIVA 404
+ L L ++ + ++L+D+ + TLF QQ L E +L EI
Sbjct: 521 VQEFTKGIQTLFLSLIGLKIATNLDDICHFMGGTLFGV------QQKILLKEKSLREITV 574
Query: 405 SL---LASKGTMLT------MNEAGHLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNF 455
L KG + +E+ H +T + +A+ + + C I+Y DL
Sbjct: 575 EWLRDLTEKGLLQKDVVDKPKDESFH--ITKLGRASFKGTIDLAYCDILYRDLKKGLEGL 632
Query: 456 CLLNSLHMLFLVIP 469
L + LH+++L P
Sbjct: 633 VLESLLHLIYLTTP 646
>gi|328778032|ref|XP_003249435.1| PREDICTED: helicase POLQ-like [Apis mellifera]
Length = 771
Score = 283 bits (725), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 158/335 (47%), Positives = 215/335 (64%), Gaps = 13/335 (3%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V EK Q++ A E F +EEYA KG +PP KR+ K SIYICTIEK LI SLI+E
Sbjct: 169 IVQEKIQAMTPFALELGFLVEEYAATKGTFPPKKRR-KKNSIYICTIEKALGLINSLIEE 227
Query: 61 NRIDEIGLIVIDEFHMLNE-PQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFI 119
R+ EIG+IV+DE H+L E RG LE +++KVLY+ +I I MSATIGN+ ++TF+
Sbjct: 228 KRLHEIGIIVVDELHLLGENGGRGATLEVLLTKVLYVNDNIHIIGMSATIGNLEEIATFL 287
Query: 120 EGITYVENSRPTKHSEYVTVDKRVFQSFDGKS---LTEIYADNLDYSLTGS--GPDAVLH 174
Y N RP + EYV D+ ++ D K+ LT++ N YS + PD +
Sbjct: 288 NADLYTGNFRPIEIKEYVKCDENIWL-VDLKTEELLTDVKKINYRYSKDAAIIDPDRIAG 346
Query: 175 LVQGNL---MVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLS 231
LV + LIFCSS+ C N+AL L ++YK +K++L+ ALK N+ L
Sbjct: 347 LVMDIIPEHSCLIFCSSRKNCENVALLLTKVLPKSLQDYKSDKKQNLLNALK--NEEGLC 404
Query: 232 TNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS 291
L + I +GV YHH+ LT+ ERRL+E+A+ GTL +ICCTSTLA G+NLPA+RVI+R
Sbjct: 405 PILSKTINFGVVYHHSGLTSEERRLLEDAFKIGTLCVICCTSTLATGINLPARRVILRSP 464
Query: 292 YVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCK 326
Y+G F++L+ YKQMVGRAGR G+ GESI++CK
Sbjct: 465 YIGNQFLNLSRYKQMVGRAGRAGMGNIGESILICK 499
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/279 (31%), Positives = 136/279 (48%), Gaps = 29/279 (10%)
Query: 395 LETTLSEIVASLLASKGTMLTMNEAGHLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLN 454
L+ +S ++ K ++ + L L S+ +AA++ + + +Y DL + +
Sbjct: 503 LQKDISSCPTTIETKKKRIIKLTNNSKLELCSLGRAAMKGCIDMECAYTLYQDLKKAQEH 562
Query: 455 FCLLNSLHMLFLVIPLEYRIPSDGILLSRSKVYDRYTKFHPQTLRVAEALGVTE-NLVAL 513
LL+ LH+L+LV P Y I S LG+ E N+ +
Sbjct: 563 LILLDYLHLLYLVTP--YNIIS--------------------------LLGINEVNISKI 594
Query: 514 NVTGKLKDEKKALLCRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKV 573
K+ + ++ RF+ ILYD+ N K+A+ Y I +QN L S FA V
Sbjct: 595 RDGLMPKNVEPRVIHRFYVTLILYDLWNQHAVYKIAEKYDISRGIVQNLLTAVSSFAFSV 654
Query: 574 YRFCEELPELWCYKQLLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELI 633
RFC+EL E W +K LL + L YC L ALMDLP VKI RARQL NAG+ +++ I
Sbjct: 655 IRFCQELDEFWAFKDLLNVFSKKLSYCCPLELEALMDLPLVKISRARQLYNAGFKTIQDI 714
Query: 634 ARADAKEMVAKIRHLPLRSARNLISAAKLHFITKMDKVE 672
A+ ++ KI +L + A +I AKL + K++ ++
Sbjct: 715 AKTQPIKLQEKIPYLSKKIAMQIIEGAKLLIVEKIENLQ 753
>gi|340055356|emb|CCC49670.1| putative DNA polymerase theta (helicase domain only) [Trypanosoma
vivax Y486]
Length = 1040
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 214/750 (28%), Positives = 350/750 (46%), Gaps = 85/750 (11%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+ EK +SL + F +E + G G+ P KR ++Y+CTIEK + L+ +++
Sbjct: 308 LAEEKTESLRPLGDALGFAVEGHYGTHGRLPLPKR----TAVYVCTIEKANSLLNHMLES 363
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIE 120
+++IG V+DE HM+ E RG ILE +SKVL L+ ++QI MSATI N+ +L+ ++
Sbjct: 364 GDVNDIGTAVVDELHMIGESHRGAILELFLSKVLCLQHNVQIIGMSATIPNLPSLAKWLR 423
Query: 121 GITYVENSRPTKHSEYVTVDKRVFQSFD--GKSLTEIYADNLDYSLTGSGPDAVLHLVQG 178
Y+ RP +YV +D V + F+ +SL E L +L
Sbjct: 424 ADCYLGQFRPVPLRQYVVMDGLVLEDFERADRSLVEAGCKKEVEQLL------LLATELE 477
Query: 179 NLMVLIFCSSKIACSNLALRLQFD---RFPGTKEYKKQEKEDLIEALKE--ENDGKLSTN 233
N VL+FC+S+ C + A + + R G + KK +++ L + DG++
Sbjct: 478 NASVLVFCASRQQCVDTARLIAQNMTARRGGLEGAKKAALANIVTELCQLGHEDGRV--- 534
Query: 234 LEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYV 293
L + + +GVAYHH L + ER LIE+AY + I+CCTSTLAAGVNLPA+RVI + YV
Sbjct: 535 LSQLVPHGVAYHHGGLLSEERDLIEQAYRQRHVTILCCTSTLAAGVNLPARRVIFKTPYV 594
Query: 294 GRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSH--MDP 351
GRDF++ Y QM GRAGR GL GES + + +D R +M+ EP SS +D
Sbjct: 595 GRDFLTKARYLQMCGRAGRAGLDAFGESFLFI-SRRDSQRGRQLMHQEVEPCSSQLLLDS 653
Query: 352 PTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQLKSP----------------ED----- 390
ILE +A + D + F + P ED
Sbjct: 654 TMFEKAILECIATGIIRLDADARRWTDSVFFQHAQGPLAPIYKASSAQLPVSLEDLFDRA 713
Query: 391 ---------QQTFLETTLSEIVASLLASKGTMLTMNEAGHL--------SLTSIAKAAVQ 433
Q ++T++ + L S + AG++ S T +V+
Sbjct: 714 LEKLLQEGLVQRTIQTSVDDARGELGVSNANVAEKPSAGNMSEDKCVVFSATPFGLCSVR 773
Query: 434 AGLSHDVCLIIYSDLLH-NKLNFCLLNSLHMLFLVIPLEYRIPSDGILLSRSKVYDRYTK 492
+ D +++ +L + L++ LH+ + + PL D + D ++
Sbjct: 774 SCFGTDEAVLVRRELEQLQRSGLILIDDLHLCYFLTPLREIGDCDWV-----AYRDVLSR 828
Query: 493 FHPQTLRVAEALGVTENLV---ALNVTGKLKDEKKALLC--RFFHACILYDVLNFDNHQK 547
R+A+ LGV E V A+ ++G D + RFF A +L D+L+
Sbjct: 829 LSDDRQRIAQMLGVDECFVQQRAMGLSGACGDNSNLMFTTRRFFVAMMLADLLSEVPVAV 888
Query: 548 VAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELWCYKQLLTDLPQTLMYCRAPNLRA 607
+ + Y LQ+ + S F+S + FC + E + + +L + L + P++
Sbjct: 889 IEQRYQCSRGQLQSLMRSASMFSSSITSFCHAM-EWYSLEAVLASFVKRLGFGVKPDIVP 947
Query: 608 LMDLPGVKIGRARQLLNAGYSSLELIARADAKEMVAKI-----------RHLPLRSARNL 656
LM++ GV+ RAR L AG+ +IA + E++ ++ ++ +RSA NL
Sbjct: 948 LMEIRGVQPPRARALWCAGFRDPAVIASSSPAELIQRVKSSSPPDSLVAKYFTVRSAVNL 1007
Query: 657 ISAAKLHFITKM-DKVEAMKNLIQNLQKNY 685
I A + ++ DK + +L Q + +Y
Sbjct: 1008 IREANILIQRRISDKKGELMDLTQRGRLSY 1037
>gi|256074218|ref|XP_002573423.1| DNA polymerase theta [Schistosoma mansoni]
Length = 923
Score = 278 bits (711), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 224/775 (28%), Positives = 353/775 (45%), Gaps = 110/775 (14%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V EK +SL E F++EEYAG +G+ PP KR S+ + TIEKG ++ SLI
Sbjct: 96 IVQEKVRSLTPMGLELGFWVEEYAGSRGRIPPVKRN-GSYSVLMATIEKGHTIVNSLIDT 154
Query: 61 NRIDEIGLIVIDEFHMLNEP-QRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFI 119
+D +GL+++DE HM+ + RG LE +++K+ + +I MSAT+ NI+ L+ +
Sbjct: 155 KTLDSLGLVIVDELHMIGDGGPRGACLEMILTKLRLSSPTTRIIGMSATLPNISDLTDCL 214
Query: 120 EGITYVENSRPTKHSEYVTVDKRVFQ---------SFDGKSLTE--IYADNLDYSLT--- 165
YV N RP K EYV V +++ + +G T+ ++ +D+ T
Sbjct: 215 SAELYVSNFRPVKLIEYVKVGDHLYEITCTKTSHCTSEGNDFTDRLVHCRMVDFQYTKKM 274
Query: 166 -GSGPDAVLHLVQGNLM--------------------------VLIFCSSKIACSNLALR 198
PD ++ LV L L+FC +K C N A +
Sbjct: 275 LSRDPDHLVALVAETLFGHSMSNWCCNRLFHPSFTRSSKERFSCLVFCPTKAHCENTA-K 333
Query: 199 LQFDRFPGTKEYKKQEKED-------------LIEALK-----EEND--GKLSTN---LE 235
+ + P + ED L+E L+ E D G + T+ LE
Sbjct: 334 MLAELLPIPACFPHLNDEDYMTEKNLVEQRSLLLENLRIDYTIENKDLKGGVQTHCPVLE 393
Query: 236 ECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGR 295
+ G+AYHH+ LT ER +E AY+ G ++++CCTSTLAAGVNLPA+RVIIR YVG
Sbjct: 394 YTVPKGIAYHHSGLTQEERNALETAYIEGVIRVLCCTSTLAAGVNLPARRVIIRKPYVGS 453
Query: 296 DFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISS-------- 347
F+S Y+QMVGRAGR GL GESI + + + F+ +++ +P +
Sbjct: 454 SFLSSTQYQQMVGRAGRAGLDSVGESITILQP-NERQSFAHLLSDISDPDDTKPRNGTAG 512
Query: 348 -------HMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLF---YQLKSPEDQQTFLET 397
+ + L IL ++ L ++ D+ + TL Y+L D + T
Sbjct: 513 RCSSSLLYENGKGLRQFILSLIGLELATTYPDIIWSCEKTLLGVQYRLYQRGDFDDLVRT 572
Query: 398 TLSEIVA-SLLASKGTMLTMN-----------EAGHLSLTSIAKAAVQAGLSHDVCLIIY 445
L+ ++ L+ + +N E T + +A+V+ G+ D +
Sbjct: 573 ELNTLIKMDLIVAVSIDAYLNKTNSVLENIELEKARFQATKLGRASVKGGIDTDRIGPLV 632
Query: 446 SDLLHNKLNFCLLNSLHMLFLVIPLEYRIPSDGILLSRSKVYDRYTKFHPQTLRVAEALG 505
SD LH+L+L+ P + D I + S ++DR + + LG
Sbjct: 633 SDFRVAARAVNTSGPLHLLYLIAPPDV---VDTIQIDWSLLFDRISIMPQNETNLISLLG 689
Query: 506 VTENLVALNVTG-KLKDEKKALLCRFFHACILY---DVLNFDNHQKVAKMYGIQNSHLQN 561
E + TG +K + F I + +L+ VA+ Y LQ+
Sbjct: 690 FPEGYILWKATGYPIKRVGSVFVVSFLFTHIHFMITTILSTLPLWYVAERYKFSRGSLQS 749
Query: 562 FLNVTSYFA-SKVYRFCEEL---PELWCYKQLLTDLPQTLMYCRAPNLRALMDLPGVKIG 617
L + A S Y E ELW + LL + + L YC + L LM+LPGVK
Sbjct: 750 TLTSAASLANSLAYALASEFSTDSELWAFAHLLPEFAKKLAYCVSSELLPLMELPGVKRA 809
Query: 618 RARQLLNAGYSSLELIARADAKEMVAKIR-HLPLRSARNLISAAKLHFITKMDKV 671
RARQL N GY +L+ IA A++ ++ +++ + R A +I AA++ K D +
Sbjct: 810 RARQLYNLGYCTLKDIACANSSDLTSRMAPFMSKRVANEIIQAAQMLISEKADAL 864
>gi|350645162|emb|CCD60104.1| DNA polymerase theta, putative [Schistosoma mansoni]
Length = 923
Score = 278 bits (710), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 225/775 (29%), Positives = 353/775 (45%), Gaps = 110/775 (14%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V EK +SL E F++EEYAG +G+ PP KR S+ + TIEKG ++ SLI
Sbjct: 96 IVQEKVRSLTPMGLELGFWVEEYAGSRGRIPPVKRN-GSYSVLMATIEKGHTIVNSLIDT 154
Query: 61 NRIDEIGLIVIDEFHMLNEP-QRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFI 119
+D +GL+++DE HM+ + RG LE +++K+ + +I MSAT+ NI+ L+ +
Sbjct: 155 KTLDSLGLVIVDELHMIGDGGPRGACLEMILTKLRLSSPTTRIIGMSATLPNISDLTDCL 214
Query: 120 EGITYVENSRPTKHSEYVTVDKRVFQ---------SFDGKSLTE--IYADNLDYSLT--- 165
YV N RP K EYV V +++ + +G T+ ++ +D+ T
Sbjct: 215 SAELYVSNFRPVKLIEYVKVGDHLYEITCTKTSHCTSEGNDFTDRLVHCRMVDFQYTKKM 274
Query: 166 -GSGPDAVLHLVQGNLM--------------------------VLIFCSSKIACSNLALR 198
PD ++ LV L L+FC +K C N A +
Sbjct: 275 LSRDPDHLVALVAETLFGHSMSNWCCNRLFHPSFTRSSKERFSCLVFCPTKAHCENTA-K 333
Query: 199 LQFDRFPGTKEYKKQEKED-------------LIEALK-----EEND--GKLSTN---LE 235
+ + P + ED L+E L+ E D G + T+ LE
Sbjct: 334 MLAELLPIPACFPHLNDEDYMTEKNLVEQRSLLLENLRIDYTIENKDLKGGVQTHCPVLE 393
Query: 236 ECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGR 295
+ G+AYHH+ LT ER +E AY+ G ++++CCTSTLAAGVNLPA+RVIIR YVG
Sbjct: 394 YTVPKGIAYHHSGLTQEERNALETAYIEGVIRVLCCTSTLAAGVNLPARRVIIRKPYVGS 453
Query: 296 DFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISS-------- 347
F+S Y+QMVGRAGR GL GESI + + + F+ +++ +P +
Sbjct: 454 SFLSSTQYQQMVGRAGRAGLDSVGESITILQP-NERQSFAHLLSDISDPDDTKPRNGTAG 512
Query: 348 -------HMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLF---YQLKSPEDQQTFLET 397
+ + L IL ++ L ++ D+ + TL Y+L D + T
Sbjct: 513 RCSSSLLYENGKGLRQFILSLIGLELATTYPDIIWSCEKTLLGVQYRLYQRGDFDDLVRT 572
Query: 398 TLSEIVA-SLLASKGTMLTMN-----------EAGHLSLTSIAKAAVQAGLSHDVCLIIY 445
L+ ++ L+ + +N E T + +A+V+ G+ D +
Sbjct: 573 ELNTLIKMDLIVAVSIDAYLNKTNSVLENIELEKARFQATKLGRASVKGGIDTDRIGPLV 632
Query: 446 SDLLHNKLNFCLLNSLHMLFLVIPLEYRIPSDGILLSRSKVYDRYTKFHPQTLRVAEALG 505
SD LH+L+L+ P + D I + S ++DR + + LG
Sbjct: 633 SDFRVAARAVNTSGPLHLLYLIAPPDV---VDTIQIDWSLLFDRISIMPQNETNLISLLG 689
Query: 506 VTENLVALNVTG-KLKDEKKALLCRFFHACILY---DVLNFDNHQKVAKMYGIQNSHLQN 561
E + TG +K + F I + +L+ VA+ Y LQ+
Sbjct: 690 FPEGYILWKATGYPIKRVGSVFVVSFLFTHIHFMITTILSTLPLWYVAERYKFSRGSLQS 749
Query: 562 FLNVTSYFA-SKVYRFCEEL---PELWCYKQLLTDLPQTLMYCRAPNLRALMDLPGVKIG 617
L + A S Y E ELW + LL + + L YC + L LM+LPGVK
Sbjct: 750 TLTSAASLANSLAYALASEFSTDSELWAFAHLLPEFAKKLAYCVSSELLPLMELPGVKRA 809
Query: 618 RARQLLNAGYSSLELIARADAKEMVAKIRHL-PLRSARNLISAAKLHFITKMDKV 671
RARQL N GY +L+ IA A++ ++ +++ L R A +I AA++ K D +
Sbjct: 810 RARQLYNLGYCTLKDIACANSSDLTSRMAPLMSKRVANEIIQAAQMLVSEKADAL 864
>gi|344255335|gb|EGW11439.1| Helicase POLQ-like [Cricetulus griseus]
Length = 940
Score = 276 bits (705), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 169/474 (35%), Positives = 253/474 (53%), Gaps = 57/474 (12%)
Query: 15 EFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEF 74
E F++EEYAG KG++PPTKR+ KKS+YI TIEKG L+ +LI+ RI +GL+V+DE
Sbjct: 382 ELGFFVEEYAGSKGRFPPTKRR-EKKSLYIATIEKGHSLVNALIETGRISTLGLVVVDEL 440
Query: 75 HMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVENSRPTKHS 134
HM+ E RG ILE ++KVLY K+ QI MSAT+ N+ L F++ Y RP +
Sbjct: 441 HMIGEGSRGAILEMTLAKVLYTSKTTQIIGMSATLNNVEDLQEFLKAEYYTSQFRPVELK 500
Query: 135 EYVTVDKRVFQ----SFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQ---GNLMVLIFCS 187
EY+ V+ +++ + +G + + + +L PD ++ LV N L+FC
Sbjct: 501 EYLKVNDTIYEVDSRAANGMTFSRLLNYKYSDALRKMDPDHLVALVTEVIPNYSCLVFCP 560
Query: 188 SKIACSNLALRL-QFDRFPGTKEY---KKQEKEDLIEALKEENDGKLSTNLEECILYGVA 243
SK C N+A L +F +K+Y + +EK ++I+ L+ +GK+ L+ I +GVA
Sbjct: 561 SKKNCENVAEMLCKF----LSKDYLNHRDEEKSEVIKNLRNVGNGKVCPVLKRTIPFGVA 616
Query: 244 YHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGRDFISLNMY 303
YHH+ LT ERRL+EEAY G L + CTSTLAAGVNLPA+RVI+R YV R+F+ N Y
Sbjct: 617 YHHSGLTTDERRLLEEAYSTGVLCLFTCTSTLAAGVNLPARRVILRAPYVAREFLRRNQY 676
Query: 304 KQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVA 363
KQM+GRAGR G+ GESI++ + E
Sbjct: 677 KQMIGRAGRAGIDTVGESILVLQ---------------------------------EKDK 703
Query: 364 ANLCSSLEDVKTLIKHTLF-YQLKSPEDQQTFLETTLSEIVASLLASKGTMLTMNEA--- 419
+ +SL D+ + T F Q K +++ E T+ + S L KG + +
Sbjct: 704 QQIATSLGDIYQFMNGTFFGVQQKILLKEKSLWEITVDSL--SYLTEKGLLQKESRGDTE 761
Query: 420 --GHLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLE 471
H +T + +A+ + + C +Y DL L + LH+++L P +
Sbjct: 762 LESHFRVTKLGQASFKGAIDLAYCDTLYRDLKKGLEGLVLESLLHLVYLTTPYD 815
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 55/87 (63%)
Query: 576 FCEELPELWCYKQLLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIAR 635
F +EL E W YK LL +L + L YC L LM++ GV GRA+QL +AGY S+ +A
Sbjct: 828 FRQELEEFWVYKALLVELTKKLTYCVKAELIPLMEVTGVLEGRAKQLYSAGYKSVMHLAN 887
Query: 636 ADAKEMVAKIRHLPLRSARNLISAAKL 662
A+ + +V I HL R A+ ++S+AKL
Sbjct: 888 ANPEVLVRTIGHLSRRQAKQIVSSAKL 914
>gi|260817896|ref|XP_002603821.1| hypothetical protein BRAFLDRAFT_124688 [Branchiostoma floridae]
gi|229289144|gb|EEN59832.1| hypothetical protein BRAFLDRAFT_124688 [Branchiostoma floridae]
Length = 1215
Score = 275 bits (704), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 174/494 (35%), Positives = 269/494 (54%), Gaps = 20/494 (4%)
Query: 183 LIFCSSKIACSNLALRLQFDRFPGT-KEYKKQEKEDLIEALKEENDGKLSTNLEECILYG 241
L+FC +K C N+ L P T + +K K+ L++AL+ + +G + L+ I +G
Sbjct: 668 LLFCPTKKNCQNVVDML-CKLLPRTLRGHKVPGKKALLKALESDGNGTVCPVLKYTIPFG 726
Query: 242 VAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGRDFISLN 301
+AYHH+ LT ER+LIEEAY G L ++ CTSTLAAGVNLPA+RVI+R +VG FIS
Sbjct: 727 LAYHHSGLTMDERKLIEEAYSEGVLCLLACTSTLAAGVNLPAKRVILRAPFVGEHFISRA 786
Query: 302 MYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHM---DPPTLVDLI 358
YKQMVGRAGR G+ SGES+ + K QD + ++ E S + D L LI
Sbjct: 787 QYKQMVGRAGRAGIDSSGESVTIVKP-QDKAKIIELIGRPFESCRSSLMYDDGKGLRTLI 845
Query: 359 LEVVAANLCSSLEDVKTLIKHTLFYQLKSPEDQQTFLETT---LSEIVASLLASKGTMLT 415
L ++ + +S V + HTLF + Q FLE T L ++V L ++ T+L
Sbjct: 846 LNLIGLKIATSRAAVSAFLSHTLFSVQCDSQQDQGFLEFTQHALQDLVEVGLVTEKTLLP 905
Query: 416 MNEAGH---LSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEY 472
+ L +T + +A+ + + C +Y DL + + NSLHML+LV P +
Sbjct: 906 ADSGDEDILLEVTRLGQASFKGPIDIKYCTQLYQDLCKAQEALVVENSLHMLYLVTPYDM 965
Query: 473 RIPSDGILLSRSKVYDRY-TKFHPQTLRVAEALGVTENLVALNVTGKLKDE---KKALLC 528
G + +Y R ++ P L+ A +GV E + +G+ + +A++
Sbjct: 966 V----GSVRPNWMIYFRQLSQLKPIELKAATIIGVPEGYITRKASGQRARQASIDEAVVS 1021
Query: 529 RFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELWCYKQ 588
RF+ ++Y ++ + V++ + + LQN L+ + F + V FCE L E+W +
Sbjct: 1022 RFYLTLMIYSLMKQHSIWDVSEKFEVPRGFLQNLLSSAASFCACVLHFCEALEEMWPLRV 1081
Query: 589 LLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIARADAKEMVAKIRHL 648
LL L + L YC L LM++PGVK GRARQL AGY +L+ +A A+ + +V I+H+
Sbjct: 1082 LLETLVKNLSYCVTSELIPLMEVPGVKQGRARQLYKAGYKTLQDLAHAETESLVQNIQHM 1141
Query: 649 PLRSARNLISAAKL 662
P + A +I+AAK+
Sbjct: 1142 PRKVAYQIIAAAKV 1155
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 117/222 (52%), Gaps = 27/222 (12%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V EK +++A A + F +EEYAG +G++PP KR+ NK ++YI TIEK + L+ SL++
Sbjct: 378 IVQEKVRTIAPFAADLDFIVEEYAGSRGRFPPRKRR-NKHALYIATIEKANSLVNSLVEL 436
Query: 61 NRIDEIGLIVIDEFHMLNE-PQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFI 119
R++EIGL+V+DE HML E RG LE ++KVLY+ KS QI MSAT+ NI L TF+
Sbjct: 437 GRLEEIGLVVVDELHMLGEGGSRGATLEMCLAKVLYISKSSQIIGMSATLNNIQELQTFL 496
Query: 120 EGITYVENSRPTKHSEYVTVDKRVFQSF------DGKSLTEIYADNLDYSLTGSGPDAVL 173
Y N RP ++ R + + +LTE + D GP +
Sbjct: 497 SAEVYSNNFRPCTEDLFIETALRSVRIYMYSRIQRSNTLTEDFVD-------AGGPWPMA 549
Query: 174 HLVQGNLMVLIFCS------------SKIACSNLALRLQFDR 203
V ++++ S A L +L+FDR
Sbjct: 550 AYVYDSVLLATHISDITTGSAAVHNVGNTALDGLTGKLEFDR 591
>gi|26342655|dbj|BAC34984.1| unnamed protein product [Mus musculus]
Length = 749
Score = 272 bits (695), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 160/399 (40%), Positives = 237/399 (59%), Gaps = 26/399 (6%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V EK SL+ E F++EEYAG KG++PP KR+ KKS+YI TIEK L+ +LI+
Sbjct: 352 IVQEKISSLSSFGIELGFFVEEYAGSKGRFPPIKRR-EKKSLYIATIEKAHSLVNALIET 410
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIE 120
+R+ +GL+V+DE HM+ E RG ILE ++KVLY K+ QI MSAT+ N+ L F++
Sbjct: 411 SRLSTLGLVVVDELHMIGEGSRGAILEMTLAKVLYTSKTTQIIGMSATLNNVEDLQAFLK 470
Query: 121 GITYVENSRPTKHSEYVTVDKRVF----QSFDGKSLTEIYADNLDYSLTGSGPDAVLHLV 176
Y RP + E++ V+ ++ Q+ DG + + + + +L PD ++ LV
Sbjct: 471 AEYYTSQFRPVELKEFLKVNDTIYEVDSQAADGMTFSRLLSYKYSEALKKMDPDRLVALV 530
Query: 177 Q---GNLMVLIFCSSKIACSNLALRL-QFDRFPGTKEY---KKQEKEDLIEALKEENDGK 229
N L+FC SK C N+A L +F +K+Y +++EK ++I++L+ +GK
Sbjct: 531 TEVIPNYSCLVFCPSKKNCENVAEMLCKF----LSKDYLNHREKEKCEVIKSLRNIGNGK 586
Query: 230 LSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIR 289
+ L+ + +G+AYHH+ LT+ ER+L+EEAY G L ++ CTSTLAAGVNLPA+RVI+R
Sbjct: 587 VCPVLKRTVPFGIAYHHSGLTSEERKLLEEAYSTGVLCLLTCTSTLAAGVNLPARRVILR 646
Query: 290 DSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLC--KTMQDFLRFSSMMNAGP-EPIS 346
YV F+ N YKQMVGRAGR G+ +GESI+L K Q L S GP E
Sbjct: 647 APYVANTFLKRNQYKQMVGRAGRAGIDTAGESILLLQEKDKQQVLELIS----GPLETCC 702
Query: 347 SHMD---PPTLVDLILEVVAANLCSSLEDVKTLIKHTLF 382
SH+ + L L ++ + +SL D+ + T F
Sbjct: 703 SHLVEEFTKGIQALFLSLIGLKIAASLGDIYQFMSGTFF 741
>gi|241237976|ref|XP_002401231.1| DNA polymerase theta, putative [Ixodes scapularis]
gi|215496132|gb|EEC05773.1| DNA polymerase theta, putative [Ixodes scapularis]
Length = 750
Score = 272 bits (695), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 207/681 (30%), Positives = 338/681 (49%), Gaps = 37/681 (5%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V EK + L+ A + F +EEYAG +G PP +R+ + ++Y+ TIEK L+ +L +
Sbjct: 67 LVQEKVRDLSPLAVDLGFLVEEYAGARGALPPVRRR-QRCAVYVATIEKAHFLVDALTEL 125
Query: 61 NRIDEIGLIVIDEFHMLNE-PQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFI 119
R+ E+GL+V+DE HML + RG LE + KV + S +I MSAT+GN+ L+TF+
Sbjct: 126 GRLSELGLLVVDELHMLGDGSSRGATLESTLVKVKRVSGSTRIVGMSATLGNMEDLTTFL 185
Query: 120 EGITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADN---LDYSLTGSGPDAVLHL- 175
+V + RP + + +R F S + +Y P+ HL
Sbjct: 186 GADVFVGSFRPVLLASWT--GRRRFCSTTAGGASGVYKGGQLSRGAGGGRGSPEDPEHLS 243
Query: 176 -----VQGNLMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKL 230
V LIFC +K C ++AL L KE++ EKE L++AL+ E G+L
Sbjct: 244 LLVGEVVPQHACLIFCPTKKNCESVALLLSRSLPRALKEHRGPEKESLLKALRAECGGRL 303
Query: 231 STNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRD 290
L + GVAYHH+ LT ERRL+EEAY +G L + CTSTLAAGVNLPA+RV++R
Sbjct: 304 CRVLRHTVPLGVAYHHSGLTLEERRLLEEAYSSGVLCCLACTSTLAAGVNLPAKRVVVRS 363
Query: 291 SYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMD 350
Y G +F++ + Y+QM GRAGR GL SGESI++ Q + S++ A E S +
Sbjct: 364 PYTGTEFLTRSRYQQMCGRAGRAGLDSSGESILIVPPGQKD-KVLSLLRAPMETCRSSLL 422
Query: 351 PPTLVD-LILEVVAANLCSSLEDVKTLIKHTLF-YQLKSPEDQQTFLETTLSEIVASLLA 408
+D L+L V+ + S+ V ++ +L QL+ T + +++A L
Sbjct: 423 QDNRLDMLLLSVIGLGVASTEAAVAEVLDSSLLALQLRQE-------GTDVGQVLAESLG 475
Query: 409 SKGTMLTMNEAGHLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVI 468
+ + L+ +S+ +AA + + ++++L + L +H+L +V
Sbjct: 476 RLRALGLLKGGSVLATSSLGRAAFKGCVDPARAQHLHAELWSSLEALSLRCHIHLLHVVA 535
Query: 469 PLEYRIPSDGILLSRSKVYDRYTKFHPQTLRVAEAL---GVTENLVALNVTGKLK-DEKK 524
P P R + Y P + L ++ L +V K D +
Sbjct: 536 PRGMGAPPQ----LRIEPSQYYRHVRPLCTLIHLTLFDFVISSRLNLFSVQASYKCDFVR 591
Query: 525 ALLCRFFHACILYDVLNFDNHQKVAKMYG---IQNSHLQNFLNVTSYFASKVYRFCEELP 581
+L+ F + M+ ++ + L+ + A + Y +ELP
Sbjct: 592 SLV--FVSGSVFLGFTFSCTSVTFGTMFSLGLVRAPPGKLHLSPNALCARRAYPP-QELP 648
Query: 582 ELWCYKQLLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIARADAKEM 641
ELW Y+ LL D + L +C + L L++LP V+ GRARQ+ AG S+ +A + +++
Sbjct: 649 ELWAYRALLPDFAERLSHCASTELLPLLELPCVRKGRARQMHQAGLRSVRDVACTEPRDL 708
Query: 642 VAKIRHLPLRSARNLISAAKL 662
+ + +P R ++ ++SAAK+
Sbjct: 709 MRLLAPIPFRVSQQVVSAAKV 729
>gi|148688333|gb|EDL20280.1| mCG128467, isoform CRA_d [Mus musculus]
Length = 405
Score = 271 bits (692), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 150/359 (41%), Positives = 218/359 (60%), Gaps = 15/359 (4%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V EK SL+ E F++EEYAG KG++PP KR+ KKS+YI TIEK L+ +LI+
Sbjct: 21 IVQEKISSLSSFGIELGFFVEEYAGSKGRFPPIKRR-EKKSLYIATIEKAHSLVNALIET 79
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIE 120
+R+ +GL+V+DE HM+ E RG ILE ++KVLY K+ QI MSAT+ N+ L F++
Sbjct: 80 SRLSTLGLVVVDELHMIGEGSRGAILEMTLAKVLYTSKTTQIIGMSATLNNVEDLQAFLK 139
Query: 121 GITYVENSRPTKHSEYVTVDKRVF----QSFDGKSLTEIYADNLDYSLTGSGPDAVLHLV 176
Y RP + E++ V+ ++ Q+ DG + + + + +L PD ++ LV
Sbjct: 140 AEYYTSQFRPVELKEFLKVNDTIYEVDSQAADGMTFSRLLSYKYSEALKKMDPDRLVALV 199
Query: 177 Q---GNLMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTN 233
N L+FC SK C N+A L ++++EK ++I++L+ +GK+
Sbjct: 200 TEVIPNYSCLVFCPSKKNCENVAEMLCKFLSKDYLNHREKEKCEVIKSLRNIGNGKVCPV 259
Query: 234 LEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYV 293
L+ + +G+AYHH+ LT+ ER+L+EEAY G L ++ CTSTLAAGVNLPA+RVI+R YV
Sbjct: 260 LKRTVPFGIAYHHSGLTSEERKLLEEAYSTGVLCLLTCTSTLAAGVNLPARRVILRAPYV 319
Query: 294 GRDFISLNMYKQMVGRAGRTGLQESGESIMLC--KTMQDFLRFSSMMNAGP-EPISSHM 349
F+ N YKQMVGRAGR G+ +GESI+L K Q L S GP E SH+
Sbjct: 320 ANTFLKRNQYKQMVGRAGRAGIDTAGESILLLQEKDKQQVLELIS----GPLETCCSHL 374
>gi|148688332|gb|EDL20279.1| mCG128467, isoform CRA_c [Mus musculus]
Length = 408
Score = 270 bits (691), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 150/359 (41%), Positives = 218/359 (60%), Gaps = 15/359 (4%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V EK SL+ E F++EEYAG KG++PP KR+ KKS+YI TIEK L+ +LI+
Sbjct: 21 IVQEKISSLSSFGIELGFFVEEYAGSKGRFPPIKRR-EKKSLYIATIEKAHSLVNALIET 79
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIE 120
+R+ +GL+V+DE HM+ E RG ILE ++KVLY K+ QI MSAT+ N+ L F++
Sbjct: 80 SRLSTLGLVVVDELHMIGEGSRGAILEMTLAKVLYTSKTTQIIGMSATLNNVEDLQAFLK 139
Query: 121 GITYVENSRPTKHSEYVTVDKRVF----QSFDGKSLTEIYADNLDYSLTGSGPDAVLHLV 176
Y RP + E++ V+ ++ Q+ DG + + + + +L PD ++ LV
Sbjct: 140 AEYYTSQFRPVELKEFLKVNDTIYEVDSQAADGMTFSRLLSYKYSEALKKMDPDRLVALV 199
Query: 177 Q---GNLMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTN 233
N L+FC SK C N+A L ++++EK ++I++L+ +GK+
Sbjct: 200 TEVIPNYSCLVFCPSKKNCENVAEMLCKFLSKDYLNHREKEKCEVIKSLRNIGNGKVCPV 259
Query: 234 LEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYV 293
L+ + +G+AYHH+ LT+ ER+L+EEAY G L ++ CTSTLAAGVNLPA+RVI+R YV
Sbjct: 260 LKRTVPFGIAYHHSGLTSEERKLLEEAYSTGVLCLLTCTSTLAAGVNLPARRVILRAPYV 319
Query: 294 GRDFISLNMYKQMVGRAGRTGLQESGESIMLC--KTMQDFLRFSSMMNAGP-EPISSHM 349
F+ N YKQMVGRAGR G+ +GESI+L K Q L S GP E SH+
Sbjct: 320 ANTFLKRNQYKQMVGRAGRAGIDTAGESILLLQEKDKQQVLELIS----GPLETCCSHL 374
>gi|19110784|gb|AAL85275.1|AF436846_1 DNA helicase HEL308 [Mus musculus]
Length = 527
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 171/488 (35%), Positives = 257/488 (52%), Gaps = 51/488 (10%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V EK SL+ E F++EEYAG KG++PP KR+ KKS+YI TIEK L+ +LI+
Sbjct: 55 IVQEKISSLSSFGIELGFFVEEYAGSKGRFPPIKRR-EKKSLYIATIEKAHSLVNALIET 113
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIE 120
+R+ +GL+V+DE HM+ E RG ILE +KVLY K+ QI MSAT+ N+ L F++
Sbjct: 114 SRLSTLGLVVVDELHMIGEGSRGAILEMTQAKVLYTSKTTQIIGMSATLNNVEDLQAFLK 173
Query: 121 GITYVENSRPTKHSEYVTVDKRVF----QSFDGKSLTEIYADNLDYSLTGSGPDAVLHLV 176
Y RP + E++ V+ ++ Q+ DG + + + + +L PD ++ LV
Sbjct: 174 AEYYTSQFRPVELKEFLKVNDTIYEVDSQAADGMTFSRLLSYKYSEALKKMDPDRLVALV 233
Query: 177 Q---GNLMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTN 233
N L+FC SK C N+A L ++++EK ++I++L+ +GK+
Sbjct: 234 TEAIPNYSCLVFCPSKKNCENVAEMLCKFLSKDYLNHREKEKCEVIKSLRNIGNGKVCPV 293
Query: 234 LEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYV 293
L+ + +G+AYHH+ LT+ ER+L+EEAY G L ++ CTSTLAAGVNLPA+RVI+R YV
Sbjct: 294 LKRTVPFGIAYHHSGLTSEERKLLEEAYSTGVLCLLTCTSTLAAGVNLPARRVILRAPYV 353
Query: 294 GRDFISLNMYKQMVGRAGRTGLQESGESIMLC--KTMQDFLRFSSMMNAGPEPISSHMDP 351
F+ N YKQMVGRAGR G+ +GESI+L K Q L S GP
Sbjct: 354 ANTFLKRNQYKQMVGRAGRAGIDTAGESILLLQEKDKQQVLELIS----GP--------- 400
Query: 352 PTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQLKSPEDQQTFLETTLSEIVASLLASKG 411
LE CS L + T LF L +++ + + +
Sbjct: 401 -------LETC----CSHLVEEFTKGIQALFLSLIGLKEKGLLQKDSCGD---------- 439
Query: 412 TMLTMNEA--GHLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIP 469
NE H +T + +A+ + + C +Y DL L + LH+++L P
Sbjct: 440 -----NEGLECHFRITKLGQASFKGAIDLAYCDTLYRDLKKGLEGLVLESLLHLIYLTTP 494
Query: 470 LEYRIPSD 477
+ S+
Sbjct: 495 YDLAAQSE 502
>gi|149046779|gb|EDL99553.1| rCG37823, isoform CRA_b [Rattus norvegicus]
Length = 755
Score = 268 bits (685), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 147/356 (41%), Positives = 215/356 (60%), Gaps = 9/356 (2%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V EK SL+ E F++EEYAG KG++PP KR+ KKS+YI TIEKG L+ +LI+
Sbjct: 348 IVQEKISSLSSFGIELGFFVEEYAGSKGRFPPIKRR-EKKSLYIATIEKGHSLVNALIET 406
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIE 120
R+ +GL+V+DE HM+ E RG LE ++KVLY K+ QI MSAT+ N+ L F++
Sbjct: 407 GRMGTLGLVVVDELHMIGEGSRGATLEMTLAKVLYTSKTTQIIGMSATLNNVEDLQAFLK 466
Query: 121 GITYVENSRPTKHSEYVTVDKRVFQ----SFDGKSLTEIYADNLDYSLTGSGPDAVLHLV 176
Y RP + E++ V+ +++ + DG + + + +L PD ++ LV
Sbjct: 467 AEYYTSQFRPVELKEFLKVNDTIYEVDSRAVDGMTFSRLLNYKYSDALKKVDPDRLVALV 526
Query: 177 Q---GNLMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTN 233
N L+FC SK C N+A L ++++EK +LI++L+ GK+
Sbjct: 527 TEVIPNYSCLVFCPSKKNCENVAEMLCKFLSRDYLNHREEEKGELIKSLRNVGHGKVCPV 586
Query: 234 LEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYV 293
L+ I +GVAYHH+ LT+ ER+L+EEAY G L + CTSTLAAGVNLPA+RVI+R YV
Sbjct: 587 LKRTIPFGVAYHHSGLTSDERKLLEEAYSTGVLCLFTCTSTLAAGVNLPARRVILRAPYV 646
Query: 294 GRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHM 349
F+ N YKQM+GRAGR G+ +GESI+L + +D + ++N E SH+
Sbjct: 647 ANTFLKRNQYKQMIGRAGRAGIDTAGESILLLQE-KDKQQVLGLINGPLEDCHSHL 701
>gi|149046778|gb|EDL99552.1| rCG37823, isoform CRA_a [Rattus norvegicus]
Length = 735
Score = 268 bits (685), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 147/356 (41%), Positives = 215/356 (60%), Gaps = 9/356 (2%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V EK SL+ E F++EEYAG KG++PP KR+ KKS+YI TIEKG L+ +LI+
Sbjct: 348 IVQEKISSLSSFGIELGFFVEEYAGSKGRFPPIKRR-EKKSLYIATIEKGHSLVNALIET 406
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIE 120
R+ +GL+V+DE HM+ E RG LE ++KVLY K+ QI MSAT+ N+ L F++
Sbjct: 407 GRMGTLGLVVVDELHMIGEGSRGATLEMTLAKVLYTSKTTQIIGMSATLNNVEDLQAFLK 466
Query: 121 GITYVENSRPTKHSEYVTVDKRVFQ----SFDGKSLTEIYADNLDYSLTGSGPDAVLHLV 176
Y RP + E++ V+ +++ + DG + + + +L PD ++ LV
Sbjct: 467 AEYYTSQFRPVELKEFLKVNDTIYEVDSRAVDGMTFSRLLNYKYSDALKKVDPDRLVALV 526
Query: 177 Q---GNLMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTN 233
N L+FC SK C N+A L ++++EK +LI++L+ GK+
Sbjct: 527 TEVIPNYSCLVFCPSKKNCENVAEMLCKFLSRDYLNHREEEKGELIKSLRNVGHGKVCPV 586
Query: 234 LEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYV 293
L+ I +GVAYHH+ LT+ ER+L+EEAY G L + CTSTLAAGVNLPA+RVI+R YV
Sbjct: 587 LKRTIPFGVAYHHSGLTSDERKLLEEAYSTGVLCLFTCTSTLAAGVNLPARRVILRAPYV 646
Query: 294 GRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHM 349
F+ N YKQM+GRAGR G+ +GESI+L + +D + ++N E SH+
Sbjct: 647 ANTFLKRNQYKQMIGRAGRAGIDTAGESILLLQE-KDKQQVLGLINGPLEDCHSHL 701
>gi|402591959|gb|EJW85888.1| type III restriction enzyme [Wuchereria bancrofti]
Length = 599
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 197/614 (32%), Positives = 306/614 (49%), Gaps = 41/614 (6%)
Query: 76 MLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSE 135
M+ E RG I+E + K + K + QI MSAT+ N+ L+ F+ + RP K E
Sbjct: 1 MIGENTRGAIIEQGLIKFMQ-KGTGQIVGMSATLSNVEQLAKFLNAAVFSTKFRPVKLVE 59
Query: 136 YVTVDKRVFQ-SFDGKSLTEIYADNLDYSLTGSGPDAVLHL---VQGNLMVLIFCSSKIA 191
V +D ++ +GK E+ + + L PD ++ L + VLIFC +K
Sbjct: 60 KVKIDNSLYIIQPEGK--LELEMNLGENKLKNRDPDGLVPLLYDIVPKRSVLIFCPTKKN 117
Query: 192 CSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTA 251
C N+ L K +++ALK E D + + LE I GVAYHH+ LTA
Sbjct: 118 CENVCKMLS----------HLMPKLAIVKALKNEEDDEFPSLLELSITRGVAYHHSGLTA 167
Query: 252 GERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGRDFISLNMYKQMVGRAG 311
ER++IE AY G + IICCTSTLAAGVNLPA+RVII VG++ + Y QM+GRAG
Sbjct: 168 DERKIIEGAYQDGIISIICCTSTLAAGVNLPARRVIINAPLVGKESLRKAQYLQMIGRAG 227
Query: 312 RTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPI--SSHMDPPTLVDLILEVVAANLCSS 369
R G + GE++ + + + +F M+N GP P SS +P +L++++ +
Sbjct: 228 RAGYDDMGEAVTVVHSSYEESKFLDMIN-GPLPRCNSSLNEPAMFSSFLLDLISLKVAQR 286
Query: 370 LEDVKTLIKHTLFYQLKSPEDQQTFLETTLSEIVASLLASKGTMLTMNEAGHLSLTSIAK 429
LED++ L++ TLF Q + E L E++ L+ ++ ++ G+ S +
Sbjct: 287 LEDLEVLVQQTLF------GIQNSGSEKLLKEMLEYLI--NHDLVNVDGNGNYSASLFGM 338
Query: 430 AAVQAGLS----HDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEYRIPSDGILLSRSK 485
A A LS +C ++ ++L K L + H+LF+++P + + D +
Sbjct: 339 AVFSASLSPLVARQMCTLLSNNL---KEGIVLSSHFHLLFMMVPFDISVDIDWNIF---- 391
Query: 486 VYDRYTKFHPQTLRVAEALGVTENLVALNVTGKLKDEKKALLCRFFHACILYDVLNFDNH 545
YD Y + LGV + + + K + R + + +L+ + +
Sbjct: 392 -YDEYKALPRSEQALLARLGVNDKQLVRCFIDQPKLNEGESPLRLYISFMLHRLWKQERF 450
Query: 546 QKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELWCYKQLLTDLPQTLMYCRAPNL 605
VA+ + + LQN L T AS + RF E+LP W K LL DL Q L C L
Sbjct: 451 FDVAERFHVSRGWLQNVLQATCSQASSITRFSEKLPSFWSLKNLLPDLVQHLRDCSQQEL 510
Query: 606 RALMDLPGVKIGRARQLLNAGYSSLELIARADAKEMVAKIRHLPLRSARNLISAAKLHFI 665
L+ L GVK GRARQL NAG+ ++ IA AD +++ I HL R A +I +AK+
Sbjct: 511 IPLLALDGVKRGRARQLYNAGFKTIGSIASADPLVLLSTIDHLNRRQANAIIRSAKVILR 570
Query: 666 TKM-DKVEAMKNLI 678
++ +KVE ++ I
Sbjct: 571 DQLAEKVEELQEQI 584
>gi|255551068|ref|XP_002516582.1| DNA polymerase theta, putative [Ricinus communis]
gi|223544402|gb|EEF45923.1| DNA polymerase theta, putative [Ricinus communis]
Length = 2154
Score = 266 bits (679), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 205/669 (30%), Positives = 310/669 (46%), Gaps = 82/669 (12%)
Query: 41 SIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLK--- 97
S+ +CTIEK + LI L++E R+ EIG+IVIDE HM+ + RG +LE +++K+ Y
Sbjct: 599 SVAVCTIEKANSLINRLLEEGRLSEIGIIVIDELHMVGDQNRGYLLELMLTKLRYAAGEG 658
Query: 98 -------------------KSIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVT 138
+QI MSAT+ N+ A++ +++ Y N RP E++
Sbjct: 659 NSESTSGESSGTSSKGDPAHGLQIVGMSATMPNVAAVADWLQAAFYQTNFRPVPLEEFIK 718
Query: 139 VDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHL----VQGNLMVLIFCSSKIACSN 194
V ++ K + + L G PD ++ L VQ VLIFCSS+ C +
Sbjct: 719 VGNTIYD----KKMDIVRTIPRAAELGGKDPDHIVELCNEVVQDGHSVLIFCSSRKGCES 774
Query: 195 LALRL-QFDRFPGTKEYKKQEKEDL---IEALKEENDGKLSTNLEECILYGVAYHHADLT 250
A + +F + E D+ +EAL+ G L LEE + GVAYHHA LT
Sbjct: 775 TAKHVSKFLKKFSVNVQNNSEFLDIASAVEALRRSPVG-LDPILEETLPSGVAYHHAGLT 833
Query: 251 AGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGRDFISLNMYKQMVGRA 310
ER +IE Y G L+++ TSTLAAGVNLPA+RVI R +GRDFI Y+QM GRA
Sbjct: 834 VEEREIIESCYRRGLLRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRA 893
Query: 311 GRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHM--DPPTLVDLILEVVAANLCS 368
GRTG+ GESI++CK + R ++N P+ S + D + ILEVVA +
Sbjct: 894 GRTGIDTKGESILICKP-DELKRIMGLLNENCPPLQSCLSEDKNGMTHAILEVVAGGIVQ 952
Query: 369 SLEDVKTLIKHTLFYQLKSPEDQQTFLETTLSEIVASLLASKGTMLTMNEAGHLSLTSIA 428
+ D+ ++ TL K D + +L L + + ++ S T +
Sbjct: 953 TANDIHRYVRCTLLNSTKPFRDVVKSAQDSL-----RWLCHRKFLDWCDDTKLYSTTPLG 1007
Query: 429 KAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEYRIPSDGILLSRSKVYD 488
+AA + L + LI+ +L + F L + LH+++L P+ + D L Y+
Sbjct: 1008 RAAFGSSLCPEESLIVLDELSRAREGFVLASDLHLVYLATPINVEVEPDWELY-----YE 1062
Query: 489 RYTKFHPQTLRVAEALGV--------------------TENLVAL-----NVTGKLK--- 520
R+ + P V +GV T+N+ L N GK K
Sbjct: 1063 RFMELSPLDKSVGNRVGVSEPFLMRMAHGAPMRMLNRSTDNMKGLPGKLENQHGKSKNSI 1122
Query: 521 --DEKKALLC-RFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFC 577
DE+ +C RF+ A IL ++ +V + + + +Q + FAS V FC
Sbjct: 1123 ISDEQSLRVCRRFYVALILSRLVQETPVAEVCEAFKVARGMVQALQENSGRFASMVSLFC 1182
Query: 578 EELPELWC-YKQLLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIARA 636
E L W + L++ + + + L +P VK RAR L AG + IA A
Sbjct: 1183 ERLG--WHDVEGLVSKFQSRVSFGVRAEIVELTTIPYVKGSRARALYKAGLRTPLAIAEA 1240
Query: 637 DAKEMVAKI 645
E+V I
Sbjct: 1241 SVSEIVKAI 1249
>gi|330792068|ref|XP_003284112.1| hypothetical protein DICPUDRAFT_27081 [Dictyostelium purpureum]
gi|325085926|gb|EGC39324.1| hypothetical protein DICPUDRAFT_27081 [Dictyostelium purpureum]
Length = 1172
Score = 265 bits (678), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 215/704 (30%), Positives = 345/704 (49%), Gaps = 71/704 (10%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYP--PTKRQLNKKSIYICTIEKGSKLIGSLI 58
+V E+ Q++++ A F +E Y G G P P R L I TIEK + ++ LI
Sbjct: 471 IVTERVQAMSEFASALSFQVEGYFGCNGTMPVVPGPRML------ISTIEKANIIVNQLI 524
Query: 59 QENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKS-IQIFAMSATIGNINALST 117
++ + +IG +V+DE HM+ + RG +LE ++SK+L++ K IQI MSATI NI L
Sbjct: 525 EDGSLLDIGCVVVDELHMIGDGDRGELLEILISKLLFMSKGEIQIVGMSATIPNIQNLKN 584
Query: 118 FIEGITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQ 177
+I G Y N RP +EY+ + ++ D + + + N S T L L+
Sbjct: 585 WIRGGVYEGNFRPVPLTEYIKIGNNLYDK-DNNLVKTLESPNDKESHT-------LELIS 636
Query: 178 GNL---MVLIFCSSKIACSNLALRLQFDRFP-GTKEYKKQEKEDLIEALKEENDGKLSTN 233
+ VL+FC SK NLA L +FP + K+ ++E LI+ LK N K+
Sbjct: 637 EIIPKHSVLVFCPSKAMTFNLATSLA-TKFPENILQDKRDQRETLIQLLKSSNGSKIDEE 695
Query: 234 LEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYV 293
L++ IL GVAYH++DLT ER +IE+ + +L ++C TSTL+ GVNLPA+RVI+R +
Sbjct: 696 LKKMILAGVAYHNSDLTNDEREVIEKGFKERSLLVLCATSTLSTGVNLPARRVILRSPTM 755
Query: 294 GRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPT 353
GRD I +Y+QMVGRAGR G+ + GESI++C+ Q + ++N+ +P+ S +
Sbjct: 756 GRDLIGNRVYRQMVGRAGRAGIDDFGESILMCEPHQA-EKCKKLLNSPLDPLISCIKS-- 812
Query: 354 LVDLILEVVAANLCSSLEDVKTLIKHTLFY-----QLKSPEDQQT--FLETTLSEIVASL 406
++V ++CS + D + I H L + +K P+ + ++E + + +L
Sbjct: 813 -AQSFQKIVLDSICSGIGDSRFSILHFLSFTYYITHIKPPKGMKPYEYMEGLVKTGIETL 871
Query: 407 LAS---------------KGTMLTMNEAGHLSLTSIAKAAVQAGLS-HDVCL-IIYSDLL 449
L K L +N + SI A G + CL I S L+
Sbjct: 872 LKEGYIQEIKFDENKKMYKNATLDLN--NRPTEDSIRYEATGFGFACFRSCLNIKESKLV 929
Query: 450 HNKL------NFCLLNSLHMLFLVIPLEYRIPSDGILLSRSKVYDRYTKFHPQTLRVAEA 503
H +L + + LHM ++ P + IP ++ K P RVA
Sbjct: 930 HAELQKAYQGSVVISEPLHMCYITTPF-FNIPEVTDWNHYINLFREILK-KPSKARVANV 987
Query: 504 LGVTENLVALNVTG----KLKDEKKALLCRFFHACILYDVLNFDNHQKVAKMYGIQNSHL 559
+G++E + + G + K+E K RF+ A +LYD+++ A + + +
Sbjct: 988 IGISEEYMIQRLNGFEATEFKEELK--YKRFYIAMVLYDLVHEQQLYMAANKFKLHRGSV 1045
Query: 560 QNFLNVTSYFASKVYRFCEELPELWCYKQLLTDL-PQTLMYCRAPNLRALMDLPGVKIGR 618
Q + F+ V FC++L W + L +L Q L + L+++ GVK R
Sbjct: 1046 QTLMQQAGSFSWMVSLFCKKLG--WIELEHLVNLYTQRLDKGVKSEIIPLVEINGVKQAR 1103
Query: 619 ARQLLNAGYSSLELIARADAKEMVAKIR--HLPLRSARNLISAA 660
AR L NAG+ +++ IA E+ K+ ARN+I A
Sbjct: 1104 ARALWNAGFKTVKSIAVCPPDELARKVNLGKFGEGQARNIIREA 1147
>gi|297802740|ref|XP_002869254.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297315090|gb|EFH45513.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 2147
Score = 264 bits (675), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 205/706 (29%), Positives = 322/706 (45%), Gaps = 90/706 (12%)
Query: 4 EKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRI 63
EK + L E ++ Y G +G K S+ +CTIEK + LI L++E R+
Sbjct: 574 EKAEHLEVLLEPLGKHVRSYYGNQGGGTLPK----GTSVAVCTIEKANSLINRLLEEGRL 629
Query: 64 DEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKK-----------------------SI 100
E+G+IVIDE HM+ + RG +LE +++K+ Y +
Sbjct: 630 SELGIIVIDELHMVGDQHRGYLLELMLTKLRYAAGEGSSESSSGESSGNSSGKADPAHGL 689
Query: 101 QIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNL 160
QI MSAT+ N+ A++ +++ Y RP EY+ V ++ K + +
Sbjct: 690 QIVGMSATMPNVGAVADWLQAALYQTEFRPVPLEEYIKVGSTIYN----KKMEVVRTIPK 745
Query: 161 DYSLTGSGPDAVLHL----VQGNLMVLIFCSSKIACSNLALRLQ--FDRFPGTKEYKKQE 214
+ G PD ++ L VQ VLIFCSS+ C + A + + P + K E
Sbjct: 746 AADMGGKDPDHIVELCNEVVQEGNSVLIFCSSRKGCESTARHISKLIKKVPIDVDGKNSE 805
Query: 215 KEDL---IEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICC 271
D+ I+AL+ G + LEE + GVAYHHA LT ER ++E Y G ++++
Sbjct: 806 FMDIRSAIDALRRSPSG-VDPVLEETLPSGVAYHHAGLTVEEREIVETCYRKGLVRVLTA 864
Query: 272 TSTLAAGVNLPAQRVIIRDSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDF 331
TSTLAAGVNLPA+RVI R +GRDFI YKQM GRAGRTG+ GES+++CK +
Sbjct: 865 TSTLAAGVNLPARRVIFRQPMIGRDFIDGTRYKQMSGRAGRTGIDTKGESVLICKP-GEL 923
Query: 332 LRFSSMMNAGPEPISSHM--DPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQLKSPE 389
R +++N P+ S + D + ILEVVA + + +D+ ++ TL K +
Sbjct: 924 KRIMALLNETCPPLQSCLSEDKNGMTHAILEVVAGGIVQTAKDIHRYVRCTLLNSTKPFQ 983
Query: 390 DQQTFLETTLSEIVASLLASKGTMLTMNEAGHL-SLTSIAKAAVQAGLSHDVCLIIYSDL 448
D + +L + L NE L + T + + + + L + LI+ DL
Sbjct: 984 DVVKSAQDSLRWLCHR------KFLEWNEETKLYTTTPLGRGSFGSSLCPEESLIVLDDL 1037
Query: 449 LHNKLNFCLLNSLHMLFLVIPLEYRIPSDGILLSRSKVYDRYTKFHPQTLRVAEALGVTE 508
L + + + LH+++LV P+ + + L Y+R+ + P V +GV E
Sbjct: 1038 LRAREGLVMASDLHLVYLVTPINVGVEPNWELY-----YERFMELSPLEQSVGNRVGVVE 1092
Query: 509 NL------------------VALNVTGK------------LKDEKKALLC-RFFHACILY 537
V N+ G+ L DE+ +C RFF A IL
Sbjct: 1093 PFLMRMAHGATVRTINKPQDVKKNLRGEYDNRHGSTSMKMLSDEQMLRVCKRFFVALILS 1152
Query: 538 DVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELWC-YKQLLTDLPQT 596
++ + +V + + + +Q F+S V FCE L W + L+
Sbjct: 1153 KLVQEASVTEVCEAFKVARGMVQALQENAGRFSSMVSVFCERLG--WHDLEGLVAKFQNR 1210
Query: 597 LMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIARADAKEMV 642
+ + + L +P +K RAR L AG + + IA A E+V
Sbjct: 1211 VSFGVRAEIVELTSIPYIKGSRARALYKAGLRTSQAIAEASIPEIV 1256
>gi|157129922|ref|XP_001661818.1| DNA polymerase theta [Aedes aegypti]
gi|108872031|gb|EAT36256.1| AAEL011649-PA [Aedes aegypti]
Length = 1128
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 158/397 (39%), Positives = 232/397 (58%), Gaps = 20/397 (5%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+ EK +L+ A +F +EEY+G KG PP KR+ K+SI++CTIEK L+ SLI+
Sbjct: 387 LAQEKLAALSPFAVATQFLVEEYSGGKGMIPPRKRR-RKQSIFVCTIEKALVLLDSLIEA 445
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIE 120
+R +EIGLI IDE HM+ EP RG LE +++KV ++ IQI MSATIGN+ ++ F+
Sbjct: 446 DRANEIGLICIDELHMIGEPNRGVNLEVLITKVQAIQAGIQIIGMSATIGNLAEIAKFMS 505
Query: 121 GITYVENSRPTKHSEYVTVDKRVFQSFDG-KSLTEIYAD----NLDYSLTGS--GPDAVL 173
+ ++ RP + E+V + + G ++L E + + N YS T + PD ++
Sbjct: 506 ADIFSQDFRPVELKEFVKCGSDMLEIKHGARTLEEAFVNKRTVNYKYSDTDTRIDPDHII 565
Query: 174 HLVQ---GNLMVLIFCSSKIACSNLALRLQFDRFPG-TKEYKKQEKEDLIEALKEENDGK 229
LV N LIFC +K C L L + P +Y+ E++ LI+ L ENDG
Sbjct: 566 GLVMETIPNDPCLIFCPTKRRCEQLCSFL-IEHLPDRVADYRAPERKTLIDLL--ENDGS 622
Query: 230 LSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIR 289
+T L G+AYHH+ LT ER+LIE+A+ A L +I CTSTLAAGVNLPA+RVIIR
Sbjct: 623 TATLLPAAFRLGIAYHHSGLTFDERKLIEDAFRAKVLSLIICTSTLAAGVNLPAKRVIIR 682
Query: 290 DSYVGRDFISLNMYKQMVGRAGRTGL-QESGESIMLCKTMQDFLRFSSMMNAGPEPISSH 348
Y+ +F++L+ YKQMVGRAGR G E GESI++C +D +++ + + +S
Sbjct: 683 SPYIATEFLTLSRYKQMVGRAGRAGFGNEGGESILIC-AQKDIALVCNLLCSPMDEANSS 741
Query: 349 MDPPTLV---DLILEVVAANLCSSLEDVKTLIKHTLF 382
+ + +LIL + +CS+ DV + TL
Sbjct: 742 LHADNFIHLKNLILSAIGLGICSTRNDVLKFVAKTLL 778
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 76/254 (29%), Positives = 135/254 (53%), Gaps = 8/254 (3%)
Query: 420 GHLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEYRIPSDG- 478
L + + KA+++AG + Y +L + + LH+L++++ +E DG
Sbjct: 867 SRLEVNLLGKASIRAGFHMERATRAYDELKRVGERLYVNDELHLLWVIV-ME-----DGG 920
Query: 479 -ILLSRSKVYDRYTKFHPQTLRVAEALGVTENLVALNVTGKLKDEKKALLCRFFHACILY 537
I + K P+ R+A+ +++ +++ ++ +L LL RFF I+Y
Sbjct: 921 EIRPKEDDFISFFNKLSPEETRIAKRFFISDYTISMILSRRLDKIDMNLLRRFFRTLIVY 980
Query: 538 DVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELWCYKQLLTDLPQTL 597
++ N Q+VA + + +Q + + AS + RFCE+LPE W + LL + Q L
Sbjct: 981 NLWNLIPPQEVAVRFTVDAGSVQTLMTNAAATASSLQRFCEQLPEFWAFDSLLKRMVQRL 1040
Query: 598 MYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIARADAKEMVAKIRHLPLRSARNLI 657
+C L LM+LP VKIGRARQL AGY+SL IA+A + ++V+ ++H+ R+A LI
Sbjct: 1041 AHCCTAELIPLMELPAVKIGRARQLYRAGYTSLSSIAKAKSSDLVSTVQHMNYRTANQLI 1100
Query: 658 SAAKLHFITKMDKV 671
+AK + + +++
Sbjct: 1101 LSAKAKLMEEFEEL 1114
>gi|358333105|dbj|GAA27633.2| helicase POLQ-like [Clonorchis sinensis]
Length = 848
Score = 263 bits (672), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 213/725 (29%), Positives = 332/725 (45%), Gaps = 122/725 (16%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V EK +SL E F++EEYAG +G+ PP KR+ S+ + TIEK ++ SLI
Sbjct: 111 IVQEKVRSLTTMGLELGFWVEEYAGSRGRIPPVKRR-GCHSVLMATIEKAHSIVNSLIDN 169
Query: 61 NRIDEIGLIVIDEFHMLNEP-QRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFI 119
+ ++GL+++DE HM+ E RG LE +++K+L + +I MSAT+ N++ L+ F+
Sbjct: 170 KSLADVGLVIVDELHMIGEGGSRGACLEILLTKLLVVSPQTRIIGMSATLANMSDLTRFL 229
Query: 120 EGITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADN-------------------- 159
+ Y N RP + +YV V +++ F+ S D
Sbjct: 230 KAELYTSNFRPVQLVQYVKVGDHLYELFETTSRNRQPTDTPEELLYDQLVHKRTVHFQYN 289
Query: 160 -------------------LDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRLQ 200
L YS+ G D +L Q L+FC +K+ C N A ++
Sbjct: 290 KQMLARDPDHLVGLVAETLLGYSVEDGGSD-ILPRSQRRFSCLVFCPTKVHCENTA-KML 347
Query: 201 FDRFPGTKEYKKQEKEDLIE----------------------ALKEENDGKLSTN---LE 235
+ P + + +D +E AL +E + T LE
Sbjct: 348 AELLPPSACFPSSLDKDSLESLVQRRSELLTELRVDSLADRDALNQERPTQWGTCCPVLE 407
Query: 236 ECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGR 295
+ GVAYHH LT ER +EEAY GTL ++CCTSTLAAGVNLPA+RVIIR Y+G
Sbjct: 408 VTVPKGVAYHHGGLTQEERVALEEAYSEGTLSVLCCTSTLAAGVNLPARRVIIRKPYIGN 467
Query: 296 DFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPE------PISS-- 347
+F+S + YKQM+GRAGR GL +GESI + + D F+ M+++ P P+S
Sbjct: 468 NFLSGSQYKQMIGRAGRAGLDSAGESITILQP-NDQTHFAKMIDSIPPICNPSVPVSGSH 526
Query: 348 --------HMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLF-YQLKSPEDQ------- 391
+ D + L+L +V + +++ D+ + K TLF Q + +
Sbjct: 527 GLCTSSLLYEDGKGMRQLLLSLVGLQIATTMHDILSAAKRTLFAVQAECAGNDVTERVVR 586
Query: 392 ---QTFLETTLSEIVASLLASKGTMLTMNEAGHLSL----TSIAKAAVQAGLSHDVCLII 444
Q + L +V+ + S + ++ L+L T + +A V+ GL D +
Sbjct: 587 AELQALIGKDLLLLVSDDVISGPSPTKLSRGDILNLQFQATRLGRATVKGGLDTDQVGSL 646
Query: 445 YSDLLHNKLNFCLLNSLHMLFLVIPLEYRIPSDGILLSRSKVYDRYTKFHPQTLRVAEAL 504
SDL LH+L+LV P + ++ I + +YDR++ P + L
Sbjct: 647 LSDLRLASRALNTSGPLHLLYLVAPPDV---AEQIQVDWGVLYDRFSLLTPAESNIISFL 703
Query: 505 GVTENLVALNVTG----KLKDEKKALLCRFFHACILYDVLNFDNH---QKVAKMYGIQNS 557
G E + TG K DE+ L R + A L ++ +VA+ Y +
Sbjct: 704 GFPEGYLLWKATGHPIRKKLDERP--LRRLYVALALSELWQTSTTVPIWRVAERYKVSRG 761
Query: 558 HLQNFLNVTSYFASKV-------YRFCEELPELWCYKQLLTDLPQTLMYCRAPNLRALMD 610
LQ+ L+ + AS + Y E +LW + LL + L YC + L LM+
Sbjct: 762 SLQSLLSSAAALASSLAHALSSEYASDE---QLWAFSHLLPEFANRLAYCVSSELLPLME 818
Query: 611 LPGVK 615
LPGVK
Sbjct: 819 LPGVK 823
>gi|343959970|dbj|BAK63842.1| DNA helicase HEL308 [Pan troglodytes]
Length = 557
Score = 261 bits (666), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 182/545 (33%), Positives = 292/545 (53%), Gaps = 35/545 (6%)
Query: 159 NLDYS--LTGSGPDAVLHLVQ---GNLMVLIFCSSKIACSNLA-LRLQFDRFPGTKEY-- 210
N YS L PD ++ LV N L+FC SK C N+A + +F +KEY
Sbjct: 8 NYKYSDTLKKMDPDHLVALVTEVIPNYSCLVFCPSKKNCENVAEMICKF----LSKEYLK 63
Query: 211 -KKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQII 269
K++EK ++I+ LK +G L L+ I +GVAYHH+ LT+ ER+L+EEAY L +
Sbjct: 64 HKEKEKCEVIKNLKNIGNGNLCPVLKRTIPFGVAYHHSGLTSDERKLLEEAYSTRVLCLF 123
Query: 270 CCTSTLAAGVNLPAQRVIIRDSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQ 329
CTSTLAAGVNLPA+RVI+R YV ++F+ N YKQM+GRAGR G+ GESI++ + +
Sbjct: 124 TCTSTLAAGVNLPARRVILRAPYVAKEFLKRNQYKQMIGRAGRAGIDTIGESILILQE-K 182
Query: 330 DFLRFSSMMNAGPEPISSHMD---PPTLVDLILEVVAANLCSSLEDVKTLIKHTLF-YQL 385
D + ++ E SH+ + L L ++ + ++L+D+ + T F Q
Sbjct: 183 DKQQVLELITKPLENCYSHLVQEFTKGIQTLFLSLIGLKIATNLDDIYHFMNGTFFGVQQ 242
Query: 386 KSPEDQQTFLETT---LSEIVASLLASKGTMLTMNE--AGHLSLTSIAKAAVQAGLSHDV 440
K +++ E T L + L K T+ E + +T + +A+ + +
Sbjct: 243 KVLLKEKSLWEITVESLRYLTEKGLLQKDTIYKSEEEVQYNFHITKLGRASFKGTIDLAY 302
Query: 441 CLIIYSDLLHNKLNFCLLNSLHMLFLVIP--LEYRIPSDGILLSRSKVYDRYTKFHPQTL 498
C I+Y DL L + LH+++L P L + D ++ R ++++ P
Sbjct: 303 CDILYRDLKKGLEGLVLESLLHLIYLTTPYDLVSQCNPDWMIYFR-----QFSQLSPAEQ 357
Query: 499 RVAEALGVTENLVALNVTGKLKDEK--KALLCRFFHACILYDVLNFDNHQKVAKMYGIQN 556
VA LGV+E+ + +G+ +K K ++ R + + +LY +L N V++ + +
Sbjct: 358 NVAAILGVSESFIGKKASGQAIGKKVDKDVVNRLYLSFVLYTLLKETNIWTVSEKFNMPR 417
Query: 557 SHLQNFLNVTSYFASKVYRFCEELPELWCYKQLLTDLPQTLMYCRAPNLRALMDLPGVKI 616
++QN L T+ F+S V FCEEL E W Y+ LL +L + L YC L LM++ GV
Sbjct: 418 GYIQNLLTGTASFSSCVLHFCEELEEFWVYRALLVELTKKLTYCVKAELIPLMEVTGVLE 477
Query: 617 GRARQLLNAGYSSLELIARADAKEMVAKIRHLPLRSARNLISAAKLHFITKMDKVEAMKN 676
GRA+QL +AGY SL +A A+ + +V I HL R A+ ++S+AK+ ++ EA++
Sbjct: 478 GRAKQLYSAGYKSLMHLANANPEVLVRTIDHLSRRQAKQIVSSAKMLL---HERAEALQE 534
Query: 677 LIQNL 681
++ L
Sbjct: 535 EVEEL 539
>gi|145334203|ref|NP_001078482.1| DNA polymerase theta subunit [Arabidopsis thaliana]
gi|62241195|dbj|BAD93700.1| helicase and polymerase containing protein TEBICHI [Arabidopsis
thaliana]
gi|332660705|gb|AEE86105.1| DNA polymerase theta subunit [Arabidopsis thaliana]
Length = 2154
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 203/706 (28%), Positives = 321/706 (45%), Gaps = 90/706 (12%)
Query: 4 EKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRI 63
EK + L E ++ Y G +G K S+ +CTIEK + LI L++E R+
Sbjct: 575 EKAEHLEVLLEPLGKHVRSYYGNQGGGTLPK----DTSVAVCTIEKANSLINRLLEEGRL 630
Query: 64 DEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKK-----------------------SI 100
E+G+IVIDE HM+ + RG +LE +++K+ Y +
Sbjct: 631 SELGIIVIDELHMVGDQHRGYLLELMLTKLRYAAGEGSSESSSGESSGTSSGKADPAHGL 690
Query: 101 QIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNL 160
QI MSAT+ N+ A++ +++ Y RP EY+ V ++ K + +
Sbjct: 691 QIVGMSATMPNVGAVADWLQAALYQTEFRPVPLEEYIKVGSTIYN----KKMEVVRTIPK 746
Query: 161 DYSLTGSGPDAVLHL----VQGNLMVLIFCSSKIACSNLALRLQ--FDRFPGTKEYKKQE 214
+ G PD ++ L VQ VLIFCSS+ C + A + P + + E
Sbjct: 747 AADMGGKDPDHIVELCNEVVQEGNSVLIFCSSRKGCESTARHISKLIKNVPVNVDGENSE 806
Query: 215 KEDL---IEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICC 271
D+ I+AL+ G + LEE + GVAYHHA LT ER ++E Y G ++++
Sbjct: 807 FMDIRSAIDALRRSPSG-VDPVLEETLPSGVAYHHAGLTVEEREIVETCYRKGLVRVLTA 865
Query: 272 TSTLAAGVNLPAQRVIIRDSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDF 331
TSTLAAGVNLPA+RVI R +GRDFI YKQM GRAGRTG+ G+S+++CK +
Sbjct: 866 TSTLAAGVNLPARRVIFRQPMIGRDFIDGTRYKQMSGRAGRTGIDTKGDSVLICKP-GEL 924
Query: 332 LRFSSMMNAGPEPISSHM--DPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQLKSPE 389
R +++N P+ S + D + ILEVVA + + +D+ ++ TL K +
Sbjct: 925 KRIMALLNETCPPLQSCLSEDKNGMTHAILEVVAGGIVQTAKDIHRYVRCTLLNSTKPFQ 984
Query: 390 DQQTFLETTLSEIVASLLASKGTMLTMNEAGHL-SLTSIAKAAVQAGLSHDVCLIIYSDL 448
D + +L + L NE L + T + + + + L + LI+ DL
Sbjct: 985 DVVKSAQDSLRWLCHR------KFLEWNEETKLYTTTPLGRGSFGSSLCPEESLIVLDDL 1038
Query: 449 LHNKLNFCLLNSLHMLFLVIPLEYRIPSDGILLSRSKVYDRYTKFHPQTLRVAEALGVTE 508
L + + + LH+++LV P+ + + L Y+R+ + P V +GV E
Sbjct: 1039 LRAREGLVMASDLHLVYLVTPINVGVEPNWELY-----YERFMELSPLEQSVGNRVGVVE 1093
Query: 509 NL------------------VALNVTGK------------LKDEKKALLC-RFFHACILY 537
V N+ G+ L DE+ +C RFF A IL
Sbjct: 1094 PFLMRMAHGATVRTLNRPQDVKKNLRGEYDSRHGSTSMKMLSDEQMLRVCKRFFVALILS 1153
Query: 538 DVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELWC-YKQLLTDLPQT 596
++ + +V + + + +Q F+S V FCE L W + L+
Sbjct: 1154 KLVQEASVTEVCEAFKVARGMVQALQENAGRFSSMVSVFCERLG--WHDLEGLVAKFQNR 1211
Query: 597 LMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIARADAKEMV 642
+ + + L +P +K RAR L AG + + IA A E+V
Sbjct: 1212 VSFGVRAEIVELTSIPYIKGSRARALYKAGLRTSQAIAEASIPEIV 1257
>gi|71652688|ref|XP_814995.1| DNA polymerase theta (helicase domain only) [Trypanosoma cruzi
strain CL Brener]
gi|70880017|gb|EAN93144.1| DNA polymerase theta (helicase domain only), putative [Trypanosoma
cruzi]
Length = 998
Score = 259 bits (662), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 208/716 (29%), Positives = 337/716 (47%), Gaps = 74/716 (10%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+ EK L + F ++ + G +G+ P KR ++++CTIEK + L+ +++E
Sbjct: 277 LAEEKAVGLRPFGDALGFAVDGHYGTQGRLPLPKR----TAVFVCTIEKANSLLNHMLEE 332
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIE 120
+E+G +V+DE HML E RG LE +SK+L L +QI MSATI N+ ++ ++
Sbjct: 333 GLTEELGAVVVDELHMLGESHRGATLELFLSKLLCLPHQVQIIGMSATIPNLPNIAKWLR 392
Query: 121 GITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHL---VQ 177
Y+ RP +Y VD V + DG E NL + + + +L L +Q
Sbjct: 393 ASCYLGQYRPIPLRQYAVVDGMVME--DG----ERNERNLVAAGYATETEQLLLLATEIQ 446
Query: 178 GNLMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEE--NDGKLSTNLE 235
G VLIFC+S+ C + A + +R G K+ + AL+ E + G L
Sbjct: 447 G-ASVLIFCASRQQCVDTARLIARNR-KGMKDGFHSASTSTLGALQNELSSFGADVNVLS 504
Query: 236 ECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGR 295
+ + +GVA+HH L ER LIE AY + I+CCTSTLAAGVNLPA+RVI + YVGR
Sbjct: 505 QLLPHGVAFHHGGLLGEERELIERAYRQREINILCCTSTLAAGVNLPARRVIFKTPYVGR 564
Query: 296 DFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHM--DPPT 353
DF++ + Y QM GRAGR GL E GES +L + +D R +M E SS M
Sbjct: 565 DFLTKSRYLQMCGRAGRAGLDEFGESFLLL-SRRDCHRGRELMRQEVEMCSSQMLSQASA 623
Query: 354 LVDLILEVVAANLCSSLEDVKTLIKHTLFYQLKSPEDQ-------------QTFLETTLS 400
+LE VA + S + + + + + P D + L++++
Sbjct: 624 FERALLECVAVGVIGSPSAAQAWMANLMCHHAAGPFDPVYDVASRPLPVALEGILQSSMD 683
Query: 401 EIVASLLASK----------GTMLTMNEAGH------LSLTSIAKAAVQAGLSHDVCLII 444
+++ S L + G TM AG+ LS T +V++ S + L++
Sbjct: 684 QLIRSGLVQRVSLRRESDEGGDAATMQPAGNDDEQVSLSATPFGACSVRSCFSIEEALLV 743
Query: 445 YSDLLH-NKLNFCLLNSLHMLFLVIPLEYRIPSDGILLSRSKVYDRYTKFHPQTLRVAEA 503
+L + + L + LH+ + + PL + + S + ++ R+A
Sbjct: 744 RGELENLQRTGLILADDLHLCYFLTPLR-----EIGECNWSAYCEVLSQMSENRQRIANM 798
Query: 504 LGVTENLVALNVTGKLKD------EKKALLCRFFHACILYDVLNFDNHQKVAKMYGIQNS 557
+GV E V G L D + RFF A +L D+L+ V + Y
Sbjct: 799 VGVDEFFVHQRSMG-LGDPYGGSGSRTFATRRFFVALMLADLLSEVPMSVVERRYQCNRG 857
Query: 558 HLQNFLNVTSYFASKVYRFCEELPELWCYKQLLTDLPQTLMYCRAPNLRALMDLPGVKIG 617
LQ+ + S F+S + FC + E + + +L+ + L + P++ LM++ G++
Sbjct: 858 QLQSLMRSASMFSSSITSFCRAM-EWFSLEAVLSSYVKRLGFGVKPDIVPLMEIRGLQPA 916
Query: 618 RARQLLNAGYSSLELIARADAKEMVAKIRH-----------LPLRSARNLISAAKL 662
RAR L AG+ IA ++ E++ ++++ LR+A LI A L
Sbjct: 917 RARALWAAGFKGPAAIAASNPGELLQRVKNANAPENKSVKFFTLRAAVALIREANL 972
>gi|407867736|gb|EKG08646.1| ATP-dependent RNA helicase, putative [Trypanosoma cruzi]
Length = 998
Score = 259 bits (661), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 208/716 (29%), Positives = 336/716 (46%), Gaps = 74/716 (10%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+ EK L + F ++ + G +G+ P KR ++++CTIEK + L+ +++E
Sbjct: 277 LAEEKAVGLRPFGDALGFAVDGHYGTQGRLPLPKR----TAVFVCTIEKANSLLNHMLEE 332
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIE 120
+E+G +V+DE HML E RG LE +SK+L L +QI MSATI N+ ++ ++
Sbjct: 333 GLTEELGAVVVDELHMLGESHRGATLELFLSKLLCLPHQVQIIGMSATIPNLPNIAKWLR 392
Query: 121 GITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHL---VQ 177
Y+ RP +Y VD V + DG E NL + + + +L L +Q
Sbjct: 393 ASCYLGQYRPIPLRQYAVVDGMVME--DG----ERNERNLVAAGYATETEQLLLLATEIQ 446
Query: 178 GNLMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEE--NDGKLSTNLE 235
G VLIFC+S+ C + A + +R G K+ + AL+ E + G L
Sbjct: 447 G-ASVLIFCASRQQCVDTARLIARNR-KGMKDGFHSASTSTLGALQNELSSFGADVNVLS 504
Query: 236 ECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGR 295
+ + +GVA+HH L ER LIE AY + I+CCTSTLAAGVNLPA+RVI + YVGR
Sbjct: 505 QLLPHGVAFHHGGLLGEERELIERAYRQREINILCCTSTLAAGVNLPARRVIFKTPYVGR 564
Query: 296 DFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHM--DPPT 353
DF++ + Y QM GRAGR GL E GES +L + +D R +M E SS M
Sbjct: 565 DFLTKSRYLQMCGRAGRAGLDEFGESFLLL-SRRDCHRGRELMRQEVEMCSSQMLSQASA 623
Query: 354 LVDLILEVVAANLCSSLEDVKTLIKHTLFYQLKSPEDQ-------------QTFLETTLS 400
+LE VA + S + + + + + P D + L +++
Sbjct: 624 FERALLECVAVGVIGSPSAAQAWMANLMCHHAAGPFDPVYDVASRPLPVALEGILHSSMD 683
Query: 401 EIVASLLASK----------GTMLTMNEAGH------LSLTSIAKAAVQAGLSHDVCLII 444
+++ S L + G TM AG+ LS T +V++ S + L++
Sbjct: 684 QLIRSGLVQRVSLRREADEGGDAATMQPAGNDDEQVSLSATPFGACSVRSCFSIEEALLV 743
Query: 445 YSDLLH-NKLNFCLLNSLHMLFLVIPLEYRIPSDGILLSRSKVYDRYTKFHPQTLRVAEA 503
+L + + L + LH+ + + PL + + S + ++ R+A
Sbjct: 744 RGELENLQRTGLILADDLHLCYFLTPLR-----EIGECNWSAYCEVLSQMSENRQRIANM 798
Query: 504 LGVTENLVALNVTGKLKD------EKKALLCRFFHACILYDVLNFDNHQKVAKMYGIQNS 557
+GV E V G L D + RFF A +L D+L+ V + Y
Sbjct: 799 VGVDEFFVHQRSMG-LGDPYGGSGSRTFATRRFFVALMLADLLSEVPMSVVERRYQCNRG 857
Query: 558 HLQNFLNVTSYFASKVYRFCEELPELWCYKQLLTDLPQTLMYCRAPNLRALMDLPGVKIG 617
LQ+ + S F+S + FC + E + + +L+ + L + P++ LM++ G++
Sbjct: 858 QLQSLMRSASMFSSSITSFCRAM-EWFSLEAVLSSYVKRLGFGVKPDIVPLMEIRGLQPA 916
Query: 618 RARQLLNAGYSSLELIARADAKEMVAKIRH-----------LPLRSARNLISAAKL 662
RAR L AG+ IA ++ E++ ++++ LR+A LI A L
Sbjct: 917 RARALWAAGFKDPAAIAASNPGELLQRVKNANAPENKSVKFFTLRAAVALIREANL 972
>gi|356554501|ref|XP_003545584.1| PREDICTED: DNA polymerase theta-like [Glycine max]
Length = 2147
Score = 257 bits (656), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 204/703 (29%), Positives = 319/703 (45%), Gaps = 86/703 (12%)
Query: 4 EKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRI 63
EK + L + + ++ Y G +G K S+ +CTIEK + L+ L++E R+
Sbjct: 549 EKAEHLERLLDPLGKHVRSYYGNQGGGTLPK----DTSVAVCTIEKANSLVNRLLEEGRL 604
Query: 64 DEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLK-----------------------KSI 100
E+G+IVIDE HM+ +P+RG +LE +++K+ Y + +
Sbjct: 605 SEMGIIVIDELHMVGDPRRGYLLELMLTKLRYAAGEGIPKSSDGESSGGSSDKADPAQGL 664
Query: 101 QIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNL 160
QI MSAT+ N+ A++ +++ Y RP EY+ V ++ KS+ +
Sbjct: 665 QIVGMSATMPNVAAVADWLQAALYQTEFRPVPLEEYIKVGNSIYN----KSMELCRIISK 720
Query: 161 DYSLTGSGPDAVLHL----VQGNLMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKE 216
L G PD V+ L VQ VLIFCSS+ C + A + T + E
Sbjct: 721 AAELGGKDPDHVVELCNEVVQEGHSVLIFCSSRKGCESTARHIAKFLKSFTVDANDCEFA 780
Query: 217 DLIEALKE--ENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTST 274
D+ A+ + L L+E + GVA+HHA LT ER ++E Y G L+++ TST
Sbjct: 781 DITSAINSLGKCPAGLDPILQETLPSGVAFHHAGLTVEEREIVETCYRKGLLRVLTATST 840
Query: 275 LAAGVNLPAQRVIIRDSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRF 334
LAAGVNLPA+RVI R +G DF+ YKQM GRAGRTG+ GESI++CK ++ +
Sbjct: 841 LAAGVNLPARRVIFRQPRIGCDFLDGTRYKQMAGRAGRTGIDTKGESILICKP-EELKKV 899
Query: 335 SSMMNAGPEPISSHM--DPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQLKSPEDQQ 392
S ++N P+ S + D + ILEVVA + + D+ ++ TL K
Sbjct: 900 SGLLNESCPPLHSCLSEDMNGMTHAILEVVAGGIVQTASDINRYVRCTLLNSTK------ 953
Query: 393 TFLETTLSEIVASLLASKGTMLTMNEAGHL-SLTSIAKAAVQAGLSHDVCLIIYSDLLHN 451
FL+ S + + L NE L S T + +A+ + L LI+ +DL
Sbjct: 954 PFLDVVKSAQESLRWLCQRKFLEWNEDTKLYSTTPLGRASFGSSLCPQESLIVLADLSRA 1013
Query: 452 KLNFCLLNSLHMLFLVIPLEYRIPSDGILLSRSKVYDRYTKFHPQTLRVAEALGVTENLV 511
+ F L + LH+++LV P+ + D L Y+ + K V +GVTE +
Sbjct: 1014 REGFVLASDLHLVYLVTPINVDVEPDWELY-----YEHFVKLSLLDQSVGNRVGVTEPFL 1068
Query: 512 -------ALNVTGKLKDEKKAL-----------------------LCRFFHACILYDVLN 541
L + K +D ++L +CR F+ ++ +L
Sbjct: 1069 MYMAHGAPLRASNKSRDNTRSLHNQRRNQLGISSATANYDDQTLRVCRRFYVALILSLLV 1128
Query: 542 FD-NHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELWC-YKQLLTDLPQTLMY 599
+ +V + + + +Q FAS V FCE L W + L+ + +
Sbjct: 1129 QEIPVGEVCEAFKVARGMVQALQENAGRFASMVAVFCERLG--WHDLEGLVAKFQNRVSF 1186
Query: 600 CRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIARADAKEMV 642
+ L +P VK RAR L AG + IA A E+V
Sbjct: 1187 GVRAEIVELTTIPYVKGSRARSLYKAGLRTPHAIAEASIPEIV 1229
>gi|66815705|ref|XP_641869.1| hypothetical protein DDB_G0279107 [Dictyostelium discoideum AX4]
gi|60469909|gb|EAL67892.1| hypothetical protein DDB_G0279107 [Dictyostelium discoideum AX4]
Length = 1238
Score = 256 bits (654), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 204/697 (29%), Positives = 350/697 (50%), Gaps = 85/697 (12%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYP--PTKRQLNKKSIYICTIEKGSKLIGSLI 58
+V EK +S+ + + + +E Y G G P P KR L ICTIEK + ++ LI
Sbjct: 511 IVCEKTESMHEFSSALQIPVEGYHGCNGTIPVLPGKRLL------ICTIEKANIIVNQLI 564
Query: 59 QENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKS-IQIFAMSATIGNINALST 117
++ R+ +IG +V+DE HM+ + +RG +LE ++SK+LY+ K IQI MSATI NI+ L
Sbjct: 565 EDGRLLDIGCVVVDEIHMIGDGERGQLLEVLISKLLYMSKGQIQIIGMSATIPNIDNLQK 624
Query: 118 FIEGITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGS--GPDAVLHL 175
+ G Y RP +EY+ + +++ +NL SL G+ + L L
Sbjct: 625 WFRGGVYQGTFRPVPLTEYIKIGDKLYDK----------ENNLVKSLQGTEANENHTLQL 674
Query: 176 ---VQGNLMVLIFCSSKIACSNLALRLQFDRFP-GTKEYKKQEKEDLIEALKEENDGKLS 231
V VLIFC+SK+ +LAL+L FP + ++ E+E LI+ ++ N K+
Sbjct: 675 CLEVVPKHSVLIFCASKLLTVSLALQLA-KSFPQAILDNRRDEREILIQLIESSNGCKVE 733
Query: 232 TNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS 291
+ + I+ GVAYH+ADLT ER +IE + +L ++C TSTL+ GVNLPA+RVI+R
Sbjct: 734 EDFKRMIMAGVAYHNADLTNDEREVIERGFKERSLLVLCATSTLSTGVNLPARRVILRSP 793
Query: 292 YVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDP 351
+GR+ + + Y+QMVGRAGR G+ E GESI++C + ++ + +P+ S ++
Sbjct: 794 RMGRNVLDIRSYRQMVGRAGRAGIDEFGESILMCDHFAPD-KAKKLLTSPMDPLLSSINK 852
Query: 352 --PTLVDLILEVVAANLCSSLEDVKTLIKHTLF-YQLKSPEDQQT--FLETTLSEIVASL 406
+ +IL+ + + + S + + +T + L P+D ++ +++ V +L
Sbjct: 853 NVESFQKIILDSICSGIASDKFSILSFFSYTFYSTHLLPPKDMTPYEYIRKLVNDSVEAL 912
Query: 407 LASKGTMLTMN-----------------------EAGHLSLTSIAKAAVQAGLSHDVCLI 443
+ S ++ N E+ T + A ++GLS
Sbjct: 913 IKSGHIQISCNQPDPNDKKTIGTAKFDLDGKPTEESIRYEYTPLGYACFRSGLSIKNAKF 972
Query: 444 IYSDL--LHNKLNFCLLNSLHMLFLVIPLEYRIPSDGILLSRSKVYDRYTKF-----HPQ 496
+Y +L + N + LHM +++ P+ + IP L D+Y KF P+
Sbjct: 973 LYDELRIIQNGA-VVISEQLHMCYIISPV-HNIPEIPDL-------DQYGKFLSKLKGPK 1023
Query: 497 TLRVAEALGVTENLV------ALNVTGKLKDEKKALLCRFFHACILYDVLNFDNHQKVAK 550
L VA+ L +++ V + +T + ++ + RFF A +L D+++ V+
Sbjct: 1024 QL-VAKLLEISDQYVYYKQLDEMAITFQEENRNR----RFFSAMVLNDLIHEVPLSMVST 1078
Query: 551 MYGIQNSHLQNFLNVTSYFASKVYRFCEELPELWCYKQLLTDL-PQTLMYCRAPNLRALM 609
Y + +Q+ +N + A V FC++L W + L +L Q L + L+
Sbjct: 1079 KYNLNRGTVQSLMNGAASHAWMVSLFCKKLG--WVELEALVNLYIQRLDKGVRHEIVPLV 1136
Query: 610 DLPGVKIGRARQLLNAGYSSLELIARADAKEMVAKIR 646
++ GVK RAR L AG+ +++ IA A +E+ ++
Sbjct: 1137 EINGVKQARARALWAAGFKTVKSIALASPEELNKAVK 1173
>gi|449522155|ref|XP_004168093.1| PREDICTED: DNA polymerase theta-like, partial [Cucumis sativus]
Length = 1607
Score = 254 bits (650), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 202/663 (30%), Positives = 309/663 (46%), Gaps = 75/663 (11%)
Query: 41 SIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLK--- 97
S+ +CTIEK + LI L++E R+ EIG+IVIDE HM+ + RG +LE +++K+ Y
Sbjct: 67 SVAVCTIEKANSLINRLLEECRLSEIGIIVIDELHMVGDQTRGYLLELLLTKLRYAAGEG 126
Query: 98 --------------------KSIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYV 137
IQI MSAT+ N+ A++ +++ Y + RP EY+
Sbjct: 127 NLDSSSGESSGTSSGKSDPAHGIQIVGMSATMPNVAAVADWLQAALYHTDFRPVPLEEYI 186
Query: 138 TVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHL----VQGNLMVLIFCSSKIACS 193
V ++ KSL + + +L G PD ++ L V+ VLIFCSS+ C
Sbjct: 187 KVGNTIYN----KSLDIVRTISKTANLGGRDPDHIVELCNEVVEDGHSVLIFCSSRKGCE 242
Query: 194 NLALRLQ--FDRFPGTKEYKKQEKEDL---IEALKEENDGKLSTNLEECILYGVAYHHAD 248
+ A + +F + E D+ I+AL+ G L LEE GVAYHHA
Sbjct: 243 STAKHVSKFLKKFSVKIQNDNSEFTDIFSAIDALRRCPSG-LDPVLEETFPSGVAYHHAG 301
Query: 249 LTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGRDFISLNMYKQMVG 308
LT ER ++E Y G L+++ TSTLAAGVNLPA+RVI R +GRDFI Y+QM G
Sbjct: 302 LTVEEREVVETCYRKGLLRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGARYRQMAG 361
Query: 309 RAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHM--DPPTLVDLILEVVAANL 366
RAGRTG+ GES+++C+ ++ R + ++N P+ S + D + ILEVVA +
Sbjct: 362 RAGRTGIDTKGESVLICRP-EEVKRINELLNESCPPLQSCLSEDKNGMTHAILEVVAGGI 420
Query: 367 CSSLEDVKTLIKHTLFYQLKSPEDQQTFLETTLSEIVASLLASKGTMLTMNEAGHL-SLT 425
+ D+ ++ TL K +D + +L + G L N L S T
Sbjct: 421 VQTATDIHRYVRCTLLNSTKPFQDVVKSAQESLRWLC------HGKFLEWNGDTKLYSTT 474
Query: 426 SIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEYRIPSD-------- 477
+ +A+ + LS + LI+ DL + F L + LH+++LV P+ + D
Sbjct: 475 PLGRASFGSSLSPEESLIVLDDLSRAREGFVLASDLHLVYLVTPINVDVEPDWELYYELF 534
Query: 478 -GILLSRSKVYDRYTKFHPQTLRVAEALGVTENLVALNVTGKLK---------------D 521
G+ V +R P +R+A V ++ N L+ +
Sbjct: 535 MGLSSLDQSVGNRVGATEPFLMRMAHGAPVRRANISRNGVAGLRTKRDEHVGVYGDRPSE 594
Query: 522 EKKALLC-RFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEEL 580
E+ +C RF+ A IL ++ +V + + +Q FAS V FCE L
Sbjct: 595 EQTIRVCKRFYVALILSRLVQETPIPEVCDAFKVARGMVQALQESAGRFASMVSVFCERL 654
Query: 581 PELWC-YKQLLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIARADAK 639
W + L+ + + + L +P VK RAR L AG + IA A
Sbjct: 655 G--WHDLEGLVAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGLRTPLAIAEASDA 712
Query: 640 EMV 642
E+V
Sbjct: 713 ELV 715
>gi|449442230|ref|XP_004138885.1| PREDICTED: DNA polymerase theta-like [Cucumis sativus]
Length = 2144
Score = 254 bits (649), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 202/663 (30%), Positives = 309/663 (46%), Gaps = 75/663 (11%)
Query: 41 SIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLK--- 97
S+ +CTIEK + LI L++E R+ EIG+IVIDE HM+ + RG +LE +++K+ Y
Sbjct: 604 SVAVCTIEKANSLINRLLEECRLSEIGIIVIDELHMVGDQTRGYLLELLLTKLRYAAGEG 663
Query: 98 --------------------KSIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYV 137
IQI MSAT+ N+ A++ +++ Y + RP EY+
Sbjct: 664 NLDSSSGESSGTSSGKSDPAHGIQIVGMSATMPNVAAVADWLQAALYHTDFRPVPLEEYI 723
Query: 138 TVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHL----VQGNLMVLIFCSSKIACS 193
V ++ KSL + + +L G PD ++ L V+ VLIFCSS+ C
Sbjct: 724 KVGNTIYN----KSLDIVRTISKTANLGGRDPDHIVELCNEVVEDGHSVLIFCSSRKGCE 779
Query: 194 NLALRLQ--FDRFPGTKEYKKQEKEDL---IEALKEENDGKLSTNLEECILYGVAYHHAD 248
+ A + +F + E D+ I+AL+ G L LEE GVAYHHA
Sbjct: 780 STAKHVSKFLKKFSVKIQNDNSEFTDIFSAIDALRRCPSG-LDPVLEETFPSGVAYHHAG 838
Query: 249 LTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGRDFISLNMYKQMVG 308
LT ER ++E Y G L+++ TSTLAAGVNLPA+RVI R +GRDFI Y+QM G
Sbjct: 839 LTVEEREVVETCYRKGLLRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGARYRQMAG 898
Query: 309 RAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHM--DPPTLVDLILEVVAANL 366
RAGRTG+ GES+++C+ ++ R + ++N P+ S + D + ILEVVA +
Sbjct: 899 RAGRTGIDTKGESVLICRP-EEVKRINELLNESCPPLQSCLSEDKNGMTHAILEVVAGGI 957
Query: 367 CSSLEDVKTLIKHTLFYQLKSPEDQQTFLETTLSEIVASLLASKGTMLTMNEAGHL-SLT 425
+ D+ ++ TL K +D + +L + G L N L S T
Sbjct: 958 VQTATDIHRYVRCTLLNSTKPFQDVVKSAQESLRWLC------HGKFLEWNGDTKLYSTT 1011
Query: 426 SIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEYRIPSD-------- 477
+ +A+ + LS + LI+ DL + F L + LH+++LV P+ + D
Sbjct: 1012 PLGRASFGSSLSPEESLIVLDDLSRAREGFVLASDLHLVYLVTPINVDVEPDWELYYELF 1071
Query: 478 -GILLSRSKVYDRYTKFHPQTLRVAEALGVTENLVALNVTGKLK---------------D 521
G+ V +R P +R+A V ++ N L+ +
Sbjct: 1072 MGLSSLDQSVGNRVGATEPFLMRMAHGAPVRRANISRNGVAGLRTKRDEHVGVYGDRPSE 1131
Query: 522 EKKALLC-RFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEEL 580
E+ +C RF+ A IL ++ +V + + +Q FAS V FCE L
Sbjct: 1132 EQTIRVCKRFYVALILSRLVQETPIPEVCDAFKVARGMVQALQESAGRFASMVSVFCERL 1191
Query: 581 PELWC-YKQLLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIARADAK 639
W + L+ + + + L +P VK RAR L AG + IA A
Sbjct: 1192 G--WHDLEGLVAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGLRTPLAIAEASDA 1249
Query: 640 EMV 642
E+V
Sbjct: 1250 ELV 1252
>gi|359476049|ref|XP_002281624.2| PREDICTED: LOW QUALITY PROTEIN: DNA polymerase theta-like [Vitis
vinifera]
Length = 2181
Score = 254 bits (649), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 210/706 (29%), Positives = 317/706 (44%), Gaps = 90/706 (12%)
Query: 4 EKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRI 63
EK + L E ++ Y G +G K S+ +CTIEK + LI L++E R+
Sbjct: 584 EKAEHLEVLLEPLGKHVRSYYGNQGGGTLPK----DTSVAVCTIEKANSLINRLLEEGRL 639
Query: 64 DEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKK-----------------------SI 100
EIG+IVIDE HM+ + RG +LE +++K+ Y +
Sbjct: 640 SEIGIIVIDELHMVGDQNRGYLLELLLTKLRYAAGEGHVESVSGESSNMSSGKSDPAHGL 699
Query: 101 QIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNL 160
QI MSAT+ N+ A++ +++ Y + RP EY+ V ++ K + I +
Sbjct: 700 QIVGMSATMPNVAAVADWLQAALYQTDFRPVPLEEYIKVGNTIYD----KKMDIIRTISK 755
Query: 161 DYSLTGSGPDAVLHL----VQGNLMVLIFCSSKIACSNLALRLQ--FDRFPGTKEYKKQE 214
L G PD ++ L VQ VL+FCSS+ C A + +F E
Sbjct: 756 TADLGGKDPDHIVELCNEVVQEGHSVLLFCSSRKGCEFTARHVSKFLKKFSTNAHNNTGE 815
Query: 215 KEDL---IEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICC 271
D+ I+AL+ G L LEE + GVAYHHA LT ER ++E Y G L+++
Sbjct: 816 FVDISSAIDALRRSPAG-LDPILEETLPSGVAYHHAGLTVEERDIVETCYRKGLLRVLTA 874
Query: 272 TSTLAAGVNLPAQRVIIRDSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDF 331
TSTLAAGVNLPA+RVI R +GRDFI YKQM GRAGRTG+ GES+++CK ++
Sbjct: 875 TSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYKQMAGRAGRTGIDTKGESVLICKP-EEV 933
Query: 332 LRFSSMMNAGPEPISSHM--DPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQLKSPE 389
R ++N P+ S + D + ILEVVA+ + + D+ ++ TL K +
Sbjct: 934 KRICGLLNESCPPLYSCLSEDKNGMTHAILEVVASGIVQTANDINRYVRCTLLNSTKPFQ 993
Query: 390 DQQTFLETTLSEIVASLLASKGTMLTMNEAGHL-SLTSIAKAAVQAGLSHDVCLIIYSDL 448
D + +L + L NE L S T + +AA + L + L++ DL
Sbjct: 994 DVVKSAQDSLRWLCHR------KFLEWNEDTKLYSTTPLGRAAFGSSLCPEESLVVLDDL 1047
Query: 449 LHNKLNFCLLNSLHMLFLVIPLEYRIPSDGILLSRSKVYDRYTKFHPQTLRVAEALGVTE 508
+ F L + LH+++LV P+ + D L Y+R+ + V +GV E
Sbjct: 1048 SRAREGFVLASDLHLVYLVTPINVDVEPDWELF-----YERFMQLSALDQSVGNRVGVVE 1102
Query: 509 ------------------------------NLVALNVTGKLKDEKKALLC-RFFHACILY 537
N + + L DE+ +C RF+ A IL
Sbjct: 1103 PFLMRMAHGAPMCASNKSRNNGKGLHDKFDNRLGITKCSLLSDEQTLRVCKRFYVALILS 1162
Query: 538 DVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELWC-YKQLLTDLPQT 596
++ +V + + + +Q FAS V FCE L W + L+
Sbjct: 1163 KLVQEVPVTEVCEAFKVARGMVQGLQENAGRFASMVSLFCERLG--WNDLEGLVAKFQNR 1220
Query: 597 LMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIARADAKEMV 642
+ + + L +P VK RAR L AG + IA A E+V
Sbjct: 1221 VSFGVRAEIVELTTIPYVKGSRARALYKAGLRTPLAIAEASIPEIV 1266
>gi|327282241|ref|XP_003225852.1| PREDICTED: DNA polymerase theta-like [Anolis carolinensis]
Length = 2435
Score = 253 bits (645), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 225/719 (31%), Positives = 346/719 (48%), Gaps = 99/719 (13%)
Query: 13 AEEFKFYLE---EYAGVK-----GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRID 64
A+E K+YL+ + AGV+ G P+ R + + +CTIE+ + L+ LI+E +D
Sbjct: 232 AKEKKYYLQAIFQEAGVRVEAYIGSISPSIR-FSALDVAVCTIERANGLLNRLIEEKALD 290
Query: 65 EIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKS---------------IQIFAMSATI 109
IG++VIDE HML + QRG +LE +++KV +L + IQI MSATI
Sbjct: 291 SIGIVVIDELHMLGDSQRGYLLELLLTKVRFLTEKMKNKQTRMGSPLSNMIQIVGMSATI 350
Query: 110 GNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSF-----DGKSLTEIYADNLDYSL 164
N++ L++++ Y + RP E V + +++ + + L I D
Sbjct: 351 PNLDLLASWLNAELYHTDFRPVPLVEQVKIGSKIYDDSMKIVREIQPLLHIKNDE----- 405
Query: 165 TGSGPDAVLHL----VQGNLMVLIFCSSKIACSNLA----------------LRLQFDRF 204
D V+ L VQ VLIFC SK C LA L+
Sbjct: 406 -----DHVVSLCYETVQDGHSVLIFCPSKSWCEKLADIIAREFYNLQHLSKGLQKTSTTA 460
Query: 205 PGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAG 264
P T + ++ E+L+ LK G L L+ I +GVA+HHA LT ER +IE A+ G
Sbjct: 461 PVTLDTRR--IEELMGQLKNCPSG-LDCMLQRTIKWGVAFHHAGLTFDERDIIEVAFRQG 517
Query: 265 TLQIICCTSTLAAGVNLPAQRVIIRDSYVGRDFISLNMYKQMVGRAGRTGLQESGESIML 324
L+++ TSTL++GVNLPA+RVIIR G + + YKQM GRAGR G+ GESI++
Sbjct: 518 VLRVLVATSTLSSGVNLPARRVIIRTPMFGSRLLDVLTYKQMAGRAGRKGVDTIGESILV 577
Query: 325 CKT---------MQDFLR--FSSMMNAGPEPISSHMDPPTLVDLILEVVAANLCSSLEDV 373
CK +Q LR S +++ E I+S M V ILE++ + + S ED+
Sbjct: 578 CKPSEKSKGVTLLQGQLRPVRSCLLSQEGEGITSSM-----VRAILEIIVSGVADSPEDI 632
Query: 374 KTLIKHTLF-YQLKSPEDQQTFLETT-LSEIVAS---LLASKGTMLTMNEAGH--LSLTS 426
+ TL LK+ +D + E L I AS LL ++ +++++ G S T
Sbjct: 633 QHYASCTLHGASLKNMQDIEREEERMCLGPIDASVQWLLENEFIRISVSDEGKEIYSATQ 692
Query: 427 IAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEYRIPSDGILLSRSKV 486
+ A + + S L I++DL +F L N LH ++LV P + D + +
Sbjct: 693 LGCATLFSSFSPTAALEIFADLQRAMKSFVLENDLHSIYLVTP----VYEDWAKIDWYRF 748
Query: 487 YDRYTKFHPQTLRVAEALGVTENLVALNVTGKL--KDEKK----ALLCRFFHACILYDVL 540
+ + K RVAE +G+ E+ +A +V GK+ K EK+ A+ RFF + L D++
Sbjct: 749 FCLWEKLPVSMRRVAELVGIEESFLAFSVKGKVITKTEKQHRQMAIHKRFFTSLALLDLI 808
Query: 541 NFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELW-CYKQLLTDLPQTLMY 599
N VAK YG LQ+ + +A + FC L W +QLL+ L +
Sbjct: 809 NEVPLNYVAKKYGCNRGQLQSLQQSAATYAGMITIFCNRLG--WHNMEQLLSQFQSRLTF 866
Query: 600 CRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIARADAKEMVAKIRH-LPLRSARNLI 657
L L+ + + AR L NAG+ ++ +A E+ R+ P RS R +
Sbjct: 867 GIQRELCDLVRISLLNAQCARALYNAGFITVADVANGTVMEVEKAFRNAAPFRSTRKAV 925
>gi|342182643|emb|CCC92122.1| putative DNA polymerase theta (helicase domain only) [Trypanosoma
congolense IL3000]
Length = 1034
Score = 253 bits (645), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 206/733 (28%), Positives = 338/733 (46%), Gaps = 94/733 (12%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYP-PTKRQLNKKSIYICTIEKGSKLIGSLIQ 59
+ EK +SL + F ++ + +G++P PT +++++CTIEK + LI ++
Sbjct: 299 LAEEKAESLKTMGDALGFTVDGHYSTQGRFPLPTT-----QTVFVCTIEKANSLINHMLD 353
Query: 60 ENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFI 119
E + IG +V+DE HM+ EP+RGP LE ++K+L L +Q+ MSATI N+ ++ ++
Sbjct: 354 EGITERIGTVVVDELHMVGEPRRGPTLELFLTKLLCLSHKVQVIGMSATIPNLPNIAQWL 413
Query: 120 EGITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQG- 178
Y+ + RP Y V V + + NL S S + + +L
Sbjct: 414 RASCYLGDYRPVPLCHYAVVGGVVLED------CVTVSRNLVESGLTSEAEQLSYLATEL 467
Query: 179 -NLMVLIFCSSK---IACSNLALRLQFDRFPGTKEYKKQEKEDLIEALK--EENDGKLST 232
+ VL+FC+++ + + +R Q + + L+E LK + +DG+L
Sbjct: 468 EDASVLVFCATRQQTVDTAKFIVRHQKETVREGSIAAELAMRALLEDLKAMDSSDGQL-- 525
Query: 233 NLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSY 292
L E + +GVA+HH L A ER L+E A+ + ++CCTSTLAAGVNLPA+RVI R Y
Sbjct: 526 -LSELVPHGVAFHHGGLLAEERALVERAFRQRRISVLCCTSTLAAGVNLPARRVIFRTPY 584
Query: 293 VGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHM--D 350
+G +F+S + Y QM GRAGR GL + GE+ + +D R +M E SH+ +
Sbjct: 585 IGMEFLSKSSYLQMCGRAGRAGLDDFGETFLFLPR-KDIERGRDLMRRDVEACVSHLLEE 643
Query: 351 PPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQLKSPED-----QQTFLETTLSEIVAS 405
ILE V L +L D + + +++ P D + LE T+ EI+
Sbjct: 644 KGVFERAILECVGIGLIRTLSDARRWLDSIMYHHAAGPMDSGFNTSSSSLEQTMEEILQC 703
Query: 406 L---LASKGTM-------LTMNEAGHLSLTSIAKA------------------------- 430
+ L G M T + G +S +S A
Sbjct: 704 ILRKLVDGGLMQRTSQPAATDTQQGIISNSSTGAATVARHHTADSTEDDMAVLLTPSPFG 763
Query: 431 --AVQAGLSHDVCLIIYSDLLH-NKLNFCLLNSLHMLFLVIPLEYRIPSDGILLSRSKVY 487
AV++ + + LII ++L + L + LH+ + V PL + + VY
Sbjct: 764 ACAVRSCFAVEDALIIRAELEKLQQSGLILADDLHLCYFVTPLWEMVECNW------AVY 817
Query: 488 -DRYTKFHPQTLRVAEALGVTENLVALNVTGKLKD------EKKALLCRFFHACILYDVL 540
D ++ R+A +GV E + G L D E+ RF+ A IL D+L
Sbjct: 818 RDIMSRLSETRQRIASMVGVDEFYINQRAMG-LGDPNGNSSEQMFKTRRFYLALILADLL 876
Query: 541 NFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELWCYKQLLTDLPQTLMYC 600
N V + Y + LQN + S F+ + FC + E + + +L + L +
Sbjct: 877 NEVPMYVVEQRYQCKRGQLQNLMRNASMFSGSITSFCRAM-EWFSLEAVLASFVKRLGFG 935
Query: 601 RAPNLRALMDLPGVKIGRARQLLNAGYSSLELIARADAKEMVAK-----------IRHLP 649
P++ LM++ GV+ RAR L AG+ S IA E++ + I++
Sbjct: 936 VKPDIVPLMEIRGVQPPRARALWVAGFKSPSAIASCTPMELLQRLKSSNQKENKAIKYFS 995
Query: 650 LRSARNLISAAKL 662
+R+A +LI A +
Sbjct: 996 IRTAVSLIREANV 1008
>gi|392868317|gb|EAS34087.2| DNA-directed DNA polymerase theta [Coccidioides immitis RS]
Length = 937
Score = 252 bits (643), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 194/694 (27%), Positives = 318/694 (45%), Gaps = 67/694 (9%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPP-------------------TKRQLNKKS 41
+V EK + L + E ++ V G YP ++ +
Sbjct: 206 IVQEKLKWLRRLVEGVDKRIDALVQVDGSYPSRAKFLQSSIRVTGFFGGSKSRATWSDTD 265
Query: 42 IYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQ 101
I +CTIEK + L+ + I+E +IDE+G++V+DE HML++ RG ++E ++SK++ L++ IQ
Sbjct: 266 IAVCTIEKANMLVNAAIEECKIDELGVVVLDELHMLDDEHRGYLIEIMISKLMLLQQDIQ 325
Query: 102 IFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSF-------------- 147
I MSAT+ N L+ ++ Y+ RP E++ D V+ +
Sbjct: 326 IVGMSATLSNTELLAKWLHANYYISRYRPIPIQEFLVYDNLVYPAGKTKDFLRTAVVLNK 385
Query: 148 DGKSLTEIYA---------DNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALR 198
G + TE A L+ + + L L+FC S+ AC AL
Sbjct: 386 SGATKTEALAARIIDKSVYKELENPIINAMVSLALETAMSGYGALVFCGSRQACHMNALI 445
Query: 199 LQFDRFPGTKEYKK---QEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERR 255
+ D P +++ DLI L+ G L E+ ++ GVA+HHA LTA ER
Sbjct: 446 IS-DAMPDDSMLDSDVLEKRMDLIAGLQSLPCG-LDPVFEKTVIKGVAFHHAGLTAEERD 503
Query: 256 LIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGRDFISLNMYKQMVGRAGRTGL 315
LI E Y G L+++ T +LAAG+NLPA+RVI+ + +GRD + M +QM GRAGR G
Sbjct: 504 LIAEGYDMGILKVLVATCSLAAGINLPARRVILCGARMGRDLVGPAMLRQMRGRAGRKGK 563
Query: 316 QESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPT--LVDLILEVVAANLCSSLEDV 373
E GE+ LC T D +++A ISS + P + +LE VA L S E +
Sbjct: 564 DEIGETF-LCCTADDLEAVLDLLDAEMPAISSGLSPEKRGINRALLEAVATRLLSGREAI 622
Query: 374 KTLIKHTLFYQLKSPEDQQTFLETTLSEIVASLLASKGTMLTMNEAGHLSLTSIAKAAVQ 433
+K +L YQ ++ + +++TL+E+V +L + G T + +A V
Sbjct: 623 NDYVKCSLIYQTMGEKELFSLVDSTLNELV------DANLLNLRFDGSFEPTQLGQAIVA 676
Query: 434 AGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEYRIPSDGILLSRSKVYDRYTKF 493
+ S + L ++ +L F + +H+ ++ PL+ G+ + D K
Sbjct: 677 SAFSPEDGLFVHDELKRALQAFVMDGEMHVFYMFAPLQ---SGTGVDIDWPTFRDEMNKL 733
Query: 494 HPQTLRVAEALGVTENLVALNVTGKLKDEKKALLCRFFH----ACILYDVLNFDNHQKVA 549
+R + +GV LV G+ K +L R + A L D+ N VA
Sbjct: 734 DDSGIRALQFMGVNPGLVNSMAQGR-SSIKDPILARTYQRAYTAFQLRDLSNEVPVSAVA 792
Query: 550 KMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELWCYKQLLTD-LPQTLMYCRAPNLRAL 608
Y ++QN + FA+ + +FC+ + W ++ D + L +L L
Sbjct: 793 HKYSTPRGNVQNLSQICHGFAAGMVKFCQRMG--WEMLAVVLDHMRDRLQAGARADLLEL 850
Query: 609 MDLPGVKIGRARQLLNAGYSSLELIARADAKEMV 642
+ VK AR L G+ +L +A ADA+++V
Sbjct: 851 AQVTYVKSRTARLLWENGFKTLRALAEADARDLV 884
>gi|303322945|ref|XP_003071464.1| DNA polymerase theta, putative [Coccidioides posadasii C735 delta
SOWgp]
gi|240111166|gb|EER29319.1| DNA polymerase theta, putative [Coccidioides posadasii C735 delta
SOWgp]
gi|320033458|gb|EFW15406.1| DNA-directed DNA polymerase theta [Coccidioides posadasii str.
Silveira]
Length = 937
Score = 251 bits (642), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 197/694 (28%), Positives = 325/694 (46%), Gaps = 67/694 (9%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPP-------------------TKRQLNKKS 41
+V EK + L + E ++ V G +P ++ +
Sbjct: 206 IVQEKLKWLRRLVEGVDKRIDALVQVDGSHPSRAKFLQSSIRVTGFFGGSKSRATWSDTD 265
Query: 42 IYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQ 101
I +CTIEK + L+ + I+E +IDE+G++V+DE HML++ RG ++E ++SK++ L++ IQ
Sbjct: 266 IAVCTIEKANMLVNAAIEECKIDELGVVVLDELHMLDDEHRGYLIEIMISKLMLLQQDIQ 325
Query: 102 IFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSFD------------- 148
I MSAT+ N L+ ++ Y+ RP E++ D V+ + +
Sbjct: 326 IVGMSATLSNTELLAKWLHANYYISRYRPIPIQEFLVYDNLVYPAGNSKDFLRTAVVLNK 385
Query: 149 -GKSLTE-IYADNLDYS----LTGSGPDAVLHLVQGNLM----VLIFCSSKIACSNLALR 198
G + TE + A +D S L +A++ L M L+FC S+ AC AL
Sbjct: 386 SGATKTEALAARTIDKSVYKELENPIINAMVSLALETAMSGYGALVFCGSRQACHMNALI 445
Query: 199 LQFDRFPGTKEYKK---QEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERR 255
+ D P +++ DLI L+ G L E+ ++ GVA+HHA LTA ER
Sbjct: 446 IS-DAMPDDSMLDSDVLEKRMDLIAGLQSLPCG-LDPVFEKTVIKGVAFHHAGLTAEERD 503
Query: 256 LIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGRDFISLNMYKQMVGRAGRTGL 315
LI E Y G L+++ T +LAAG+NLPA+RVI+ + +GRD + M +QM GRAGR G
Sbjct: 504 LIAEGYDMGILKVLVATCSLAAGINLPARRVILCGARMGRDLVGPAMLRQMRGRAGRKGK 563
Query: 316 QESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPT--LVDLILEVVAANLCSSLEDV 373
E GE+ LC T D +++A ISS + P + +LE VA L S E +
Sbjct: 564 DEIGETF-LCCTADDLEAVLDLLDAEMPAISSGLSPEKRGINRALLEAVATRLVSGREAI 622
Query: 374 KTLIKHTLFYQLKSPEDQQTFLETTLSEIVASLLASKGTMLTMNEAGHLSLTSIAKAAVQ 433
+K +L YQ ++ + +++TL+E+V +L + G T + +A V
Sbjct: 623 NDYVKCSLIYQTMGEKELFSLVDSTLNELV------DANLLNLRFDGSFEPTQLGQAIVA 676
Query: 434 AGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEYRIPSDGILLSRSKVYDRYTKF 493
+ S + L ++ +L F + +H+ ++ PL+ G+ + D K
Sbjct: 677 SAFSPEDGLFVHDELKRALQAFVMDGEMHVFYMFAPLQ---SGTGVDIDWPTFRDEMNKL 733
Query: 494 HPQTLRVAEALGVTENLVALNVTGKLKDEKKALLCRFFH----ACILYDVLNFDNHQKVA 549
+R + +GV LV G+ K +L R + A L D+ N VA
Sbjct: 734 DDSGIRALQFMGVNPGLVNSMAQGR-SSIKDTILARTYQRAYTAFQLRDLSNEVPVSAVA 792
Query: 550 KMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELWCYKQLLTD-LPQTLMYCRAPNLRAL 608
Y ++QN + FA+ + +FC+ + W ++ D + L +L L
Sbjct: 793 HKYSTPRGNVQNLSQICHGFAAGMVKFCQRMG--WEMLAVVLDHMRDRLQAGARADLLEL 850
Query: 609 MDLPGVKIGRARQLLNAGYSSLELIARADAKEMV 642
+ VK AR L G+ +L +A ADA+++V
Sbjct: 851 AQVTYVKSRTARLLWENGFKTLRALAEADARDLV 884
>gi|218186696|gb|EEC69123.1| hypothetical protein OsI_38041 [Oryza sativa Indica Group]
Length = 1986
Score = 251 bits (641), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 201/701 (28%), Positives = 318/701 (45%), Gaps = 84/701 (11%)
Query: 4 EKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRI 63
EK + L + E ++ + G +G K S+ +CTIEK + L+ L++E R+
Sbjct: 532 EKAEHLEQLLEPLGRHVRSFYGNQGGGSLPK----DTSVAVCTIEKANSLVNKLLEEGRL 587
Query: 64 DEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKK-----------------------SI 100
E+G+IVIDE HM+ + RG +LE +++K+ Y +
Sbjct: 588 SELGIIVIDELHMVGDQHRGYLLELMLTKLRYAAGEGNSESSSGEISGSSSGKMDATHGL 647
Query: 101 QIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNL 160
QI MSAT+ N+ A++ +++ Y RP E++ V +VF K + +
Sbjct: 648 QIIGMSATMPNVAAVADWLQAALYQTEFRPVPLEEFIKVGNQVFD----KDMNVVRVLPK 703
Query: 161 DYSLTGSGPDAVLHL----VQGNLMVLIFCSSKIACSNLALRL-QFDRFP--GTKEYKKQ 213
L G PD ++ L VQ VL+FCSS+ C + A + +F + G+ + +
Sbjct: 704 VADLGGKDPDHIVELCNEVVQQGHSVLLFCSSRKGCESTARHVAKFLKVASVGSSDVGSE 763
Query: 214 --EKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICC 271
+ +EALK G L LEE + GVAYHHA LT ER ++E Y G ++++
Sbjct: 764 FPDATFAVEALKRSPSG-LDPVLEETLPSGVAYHHAGLTVEEREIVETCYRKGLVRVLAA 822
Query: 272 TSTLAAGVNLPAQRVIIRDSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDF 331
TSTLAAGVNLPA+RVI R +GRDFI YKQM GRAGRTG+ GESI++CK ++
Sbjct: 823 TSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYKQMSGRAGRTGIDTKGESILVCKP-EEV 881
Query: 332 LRFSSMMNAGPEPISSHM--DPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQLKSPE 389
R + ++ + P+ S + D + I+EVVA + + D+ ++ TL K E
Sbjct: 882 KRITGILRSNCTPLESCLSEDKNGMTHAIMEVVAGGIVQTASDIHRYVRCTLLNSTKPFE 941
Query: 390 DQQTFLETTLSEIVASLLASKGTMLTMNEAGHLSLTSIAKAAVQAGLSHDVCLIIYSDLL 449
D + +L L K + NE S T + AA + L+ + L++ DL
Sbjct: 942 DVVKSAQDSL-----RWLCHKRFLEWNNETKIYSTTPLGLAAFGSSLNPEESLVVLDDLS 996
Query: 450 HNKLNFCLLNSLHMLFLVIPLEYRIPSDGILLSRSKVYDRYTKFHPQTLRVAEALGVTEN 509
+ F L LH+++LV P+ + D L Y+R+ + V +GV E
Sbjct: 997 RAREGFVLACDLHLVYLVTPINVDVEPDWELY-----YERFMQLTSLEQSVGNRVGVIEP 1051
Query: 510 LV-------ALNVTGK--------------------LKDEKKALLCRFFHACILYDVLNF 542
+ A+ V GK + ++ + RF+ A +L +
Sbjct: 1052 FLMHMAHGAAMPVRGKPQRAGIRNRSPTRGSGGNALINEQALRVSKRFYVALMLSRLAQE 1111
Query: 543 DNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELWC-YKQLLTDLPQTLMYCR 601
V + + + +Q FAS V FC+ L W + L+ + +
Sbjct: 1112 IPVTDVCEAFKVARGMIQALQENAGRFASMVSVFCQRLG--WHDLEGLVAKFQNRVCFGV 1169
Query: 602 APNLRALMDLPGVKIGRARQLLNAGYSSLELIARADAKEMV 642
+ L +P VK RAR L +G + IA A E+
Sbjct: 1170 RAEIAELTSIPFVKGSRARALYKSGLRTPVAIAEASIPEIA 1210
>gi|349605499|gb|AEQ00715.1| Helicase POLQ-like-like protein, partial [Equus caballus]
Length = 510
Score = 251 bits (640), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 161/499 (32%), Positives = 271/499 (54%), Gaps = 36/499 (7%)
Query: 209 EYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQI 268
+++++EK+++I+ LK + G L L+ I +GVAYHH+ LT+ ER+L+EEAY G L +
Sbjct: 4 KHREKEKQEVIQNLKNLSGGSLCPVLKRTIPFGVAYHHSGLTSEERKLLEEAYSTGVLCL 63
Query: 269 ICCTSTLAAGVNLPAQRVIIRDSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTM 328
CTSTLAAGVNLPA+RVI+R YV ++F+ N YKQM+GRAGR G+ +GESI++ +
Sbjct: 64 FTCTSTLAAGVNLPARRVILRAPYVAKEFLKRNQYKQMIGRAGRAGIDSTGESILILQE- 122
Query: 329 QDFLRFSSMMNAGPEPISSHMD---PPTLVDLILEVVAANLCSSLEDVKTLIKHTLF-YQ 384
+D + +++ E SH+ + L L ++ + ++L+D+ + T F Q
Sbjct: 123 KDKQKVLELISRPLENCYSHLVQEFTKGIQTLFLSLIGLKIATNLDDIYHFMSGTFFGVQ 182
Query: 385 LKSPEDQQTFLETT---LSEIVASLLASKGTMLTMNEAGHLS----------------LT 425
K ++T + T L + L K T+LT E G L +T
Sbjct: 183 QKILLKEKTLWDITVDSLRYLTEKGLLQKDTILT--EKGLLQKDTICKSEEEFQYSFQIT 240
Query: 426 SIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEYRIPSDGILLSRSK 485
++ +A+ + + C ++Y DL L + LH+++L P + D +
Sbjct: 241 NLGRASFKGTIDLAYCDVLYRDLKKGLEGLVLESLLHLIYLTTPYDMASQCDPDWM---- 296
Query: 486 VYDR-YTKFHPQTLRVAEALGVTENLVALNVTGKLKDEK--KALLCRFFHACILYDVLNF 542
+Y R +++ P VA +GV+EN + +G+ +K K ++ R + + +L+ +L
Sbjct: 297 IYFRQFSQLSPAEQNVAALVGVSENFLGKKASGQAIKKKVDKGIVNRLYLSFVLFTLLKE 356
Query: 543 DNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELWCYKQLLTDLPQTLMYCRA 602
N V++ + + ++QN L + F+S V FCEEL E W Y+ LL +L + L YC
Sbjct: 357 TNIWSVSEKFNMPRGYVQNLLTAAASFSSCVLHFCEELEEFWVYRVLLVELTKKLTYCVK 416
Query: 603 PNLRALMDLPGVKIGRARQLLNAGYSSLELIARADAKEMVAKIRHLPLRSARNLISAAKL 662
L LM++ GV RA+QL +AGY SL +A A+ + ++ I HL R A+ ++S+AK+
Sbjct: 417 AELIPLMEVTGVLEARAKQLYSAGYKSLMHLANANPEVLIRTIDHLSRRQAKQIVSSAKM 476
Query: 663 HFITKMDKVEAMKNLIQNL 681
+K EA++ ++ L
Sbjct: 477 LL---HEKAEALREEVEEL 492
>gi|222616936|gb|EEE53068.1| hypothetical protein OsJ_35810 [Oryza sativa Japonica Group]
Length = 2044
Score = 251 bits (640), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 201/701 (28%), Positives = 318/701 (45%), Gaps = 84/701 (11%)
Query: 4 EKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRI 63
EK + L + E ++ + G +G K S+ +CTIEK + L+ L++E R+
Sbjct: 552 EKAEHLEQLLEPLGRHVRSFYGNQGGGSLPK----DTSVAVCTIEKANSLVNKLLEEGRL 607
Query: 64 DEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKK-----------------------SI 100
E+G+IVIDE HM+ + RG +LE +++K+ Y +
Sbjct: 608 SELGIIVIDELHMVGDQHRGYLLELMLTKLRYAAGEGNSESSSGEISGSSSGKMDATHGL 667
Query: 101 QIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNL 160
QI MSAT+ N+ A++ +++ Y RP E++ V +VF K + +
Sbjct: 668 QIIGMSATMPNVAAVADWLQAALYQTEFRPVPLEEFIKVGNQVFD----KDMNVVRVLPK 723
Query: 161 DYSLTGSGPDAVLHL----VQGNLMVLIFCSSKIACSNLALRL-QFDRFP--GTKEYKKQ 213
L G PD ++ L VQ VL+FCSS+ C + A + +F + G+ + +
Sbjct: 724 VADLGGKDPDHIVELCNEVVQQGHSVLLFCSSRKGCESTARHVAKFLKVASVGSSDVGSE 783
Query: 214 --EKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICC 271
+ +EALK G L LEE + GVAYHHA LT ER ++E Y G ++++
Sbjct: 784 FPDATFAVEALKRSPSG-LDPVLEETLPSGVAYHHAGLTVEEREIVETCYRKGLVRVLAA 842
Query: 272 TSTLAAGVNLPAQRVIIRDSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDF 331
TSTLAAGVNLPA+RVI R +GRDFI YKQM GRAGRTG+ GESI++CK ++
Sbjct: 843 TSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYKQMSGRAGRTGIDTKGESILVCKP-EEV 901
Query: 332 LRFSSMMNAGPEPISSHM--DPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQLKSPE 389
R + ++ + P+ S + D + I+EVVA + + D+ ++ TL K E
Sbjct: 902 KRITGILRSNCTPLESCLSEDKNGMTHAIMEVVAGGIVQTASDIHRYVRCTLLNSTKPFE 961
Query: 390 DQQTFLETTLSEIVASLLASKGTMLTMNEAGHLSLTSIAKAAVQAGLSHDVCLIIYSDLL 449
D + +L L K + NE S T + AA + L+ + L++ DL
Sbjct: 962 DVVKSAQDSL-----RWLCHKRFLEWNNETKIYSTTPLGLAAFGSSLNPEESLVVLDDLS 1016
Query: 450 HNKLNFCLLNSLHMLFLVIPLEYRIPSDGILLSRSKVYDRYTKFHPQTLRVAEALGVTEN 509
+ F L LH+++LV P+ + D L Y+R+ + V +GV E
Sbjct: 1017 RAREGFVLACDLHLVYLVTPINVDVEPDWELY-----YERFMQLTSLEQSVGNRVGVIEP 1071
Query: 510 LV-------ALNVTGK--------------------LKDEKKALLCRFFHACILYDVLNF 542
+ A+ V GK + ++ + RF+ A +L +
Sbjct: 1072 FLMHMAHGAAMPVRGKPQRAGIRNRSPTRGSGGNALINEQALRVSKRFYVALMLSRLAQE 1131
Query: 543 DNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELWC-YKQLLTDLPQTLMYCR 601
V + + + +Q FAS V FC+ L W + L+ + +
Sbjct: 1132 IPVTDVCEAFKVARGMIQALQENAGRFASMVSVFCQRLG--WHDLEGLVAKFQNRVCFGV 1189
Query: 602 APNLRALMDLPGVKIGRARQLLNAGYSSLELIARADAKEMV 642
+ L +P VK RAR L +G + IA A E+
Sbjct: 1190 RAEIAELTSIPFVKGSRARALYKSGLRTPVAIAEASIPEIA 1230
>gi|224043967|ref|XP_002187783.1| PREDICTED: DNA polymerase theta [Taeniopygia guttata]
Length = 2588
Score = 248 bits (634), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 208/718 (28%), Positives = 343/718 (47%), Gaps = 101/718 (14%)
Query: 13 AEEFKFYLE--------EYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRID 64
A+E K YL+ G G P R + + +CTIEK + LI LI+EN++D
Sbjct: 162 AKEKKRYLQALFQEVDVRVEGYMGSMAPAGR-FSALDVAVCTIEKANGLINRLIEENKMD 220
Query: 65 EIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKK---------------SIQIFAMSATI 109
+G++V+DE HML + RG +LE +++KV Y+ + IQI MSAT+
Sbjct: 221 SLGVVVVDELHMLGDSHRGYLLELLLTKVRYVTEKVAKGHSKSTSPGFGGIQIVGMSATL 280
Query: 110 GNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGP 169
N+ L+++++ Y + RP E+V + ++ S S+ + L G
Sbjct: 281 PNLGLLASWLDAELYCTDFRPVPLKEWVKIGSNIYDS----SMNLVREFQPKLQLKGD-E 335
Query: 170 DAVLHL----VQGNLMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEK---------- 215
D ++ L V G VL+FC SK C LA + + F G ++ + K
Sbjct: 336 DHIVSLCYETVCGGHSVLLFCPSKNWCEKLADIIARE-FYGLQQTESSAKNSALAPVVVD 394
Query: 216 ----EDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICC 271
+++++ LK G L + L+ + +GVA+HHA LT ER +IE A+ G ++++
Sbjct: 395 REGIDEVLDQLKRSISG-LDSVLQRTLPWGVAFHHAGLTFDERDIIEGAFRRGLIRVLAA 453
Query: 272 TSTLAAGVNLPAQRVIIRDSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDF 331
TSTL++GVNLPA+RVIIR G + + YKQM GRAGR G+ GESI++CK +
Sbjct: 454 TSTLSSGVNLPARRVIIRTPTFGGRLLDILTYKQMAGRAGRKGVDTEGESILVCKPSERS 513
Query: 332 LRFSSMMNAGPEPISSHM-------DPPTLVDLILEVVAANLCSSLEDVKTLIKHTLF-- 382
+ ++++ +P+ S + ++ ILE++ + ++ EDV+T TL
Sbjct: 514 -KGAALLQGSLKPVCSCLLRREGEGVASSMKRAILEIIVGGVANTPEDVQTYASCTLLAS 572
Query: 383 ------YQLKSPEDQQT----------FLETTLSEIVASLLASKGTMLTMNEAGHLSLTS 426
++ ED+ LE ++V S KG + G +L+S
Sbjct: 573 SLKESKWENGKEEDKARAGPIEACVAWLLENEFIQVVDSDNDVKGKVYHPTHLGSATLSS 632
Query: 427 IAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEYRIPSDGILLSRSKV 486
LS L I++DL +F L N LH+++LV P + + + +
Sbjct: 633 --------SLSPTEALEIFADLQRAMKSFVLENDLHIVYLVTP----VYEEWTTIDWYQF 680
Query: 487 YDRYTKFHPQTLRVAEALGVTENLVALNVTGKL--KDEKK----ALLCRFFHACILYDVL 540
+ + K RVAE +G+ E +A +V GK+ K EK+ A+ RFF + L D++
Sbjct: 681 FCLWEKLPASMKRVAELVGIEEGFLARSVKGKITAKTEKQHRQMAIHKRFFTSLALLDLI 740
Query: 541 NFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELWCYKQLLTDLPQTLMYC 600
+ Q + K YG LQ+ + +A V FC L W +LL Q+ +
Sbjct: 741 SEVPLQDMTKKYGCNRGQLQSLQQSAATYAGMVTVFCNRLG--WHNMELLLSQFQSRLTF 798
Query: 601 RAPNLRALMDLPGVKI---GRARQLLNAGYSSLELIARADAKEMVAKIRH-LPLRSAR 654
R L DL V + RAR L +AG+ ++ +A+A ++ A +++ +P +S R
Sbjct: 799 GV--HRELCDLVRVSLLNAQRARTLYSAGFVTVADLAKASPGDVAAALKNSVPFKSVR 854
>gi|281207471|gb|EFA81654.1| hypothetical protein PPL_05648 [Polysphondylium pallidum PN500]
Length = 1179
Score = 248 bits (632), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 175/620 (28%), Positives = 307/620 (49%), Gaps = 62/620 (10%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKG--QYPPTKRQLNKKSIYICTIEKGSKLIGSLI 58
+V EK +SL + ++ KF ++ Y G++G PP I +CTIEK + ++ +I
Sbjct: 562 IVTEKAESLVEFGQQLKFSVDAYYGIQGVIPVPP------GNGIVVCTIEKANIIVNQMI 615
Query: 59 QENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKK-SIQIFAMSATIGNINALST 117
++ R+ EIG +VIDE HM+ + +RG +LE ++SK+L++ K S+Q+ MSATI N+ +
Sbjct: 616 EDKRMSEIGTVVIDELHMIGDGERGVLLEMLISKILFVTKGSVQVVGMSATIPNLAMMQR 675
Query: 118 FIEGITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQ 177
+ G Y + RP K E+V +++++ DG L+ S D ++HLV+
Sbjct: 676 WFRGGVYEKQFRPVKLEEFVRFEEKIYAKPDGAPA------RLEESRQLEKGDNLVHLVK 729
Query: 178 G----NLMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTN 233
VL+FC + ++A ++ P ++ KK EK+ L+ L N
Sbjct: 730 EVTSEGHSVLVFCHTIELTVSIAKKIA-TALPEERQVKKDEKDILLRNLGAATFPNADDN 788
Query: 234 LEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYV 293
L+ + GVA+H++ LT ER +IE+ + TL ++C TSTL+AGVNLPA+RVIIR +
Sbjct: 789 LKATVPSGVAFHNSTLTNDEREIIEQGFKERTLNVLCATSTLSAGVNLPAKRVIIRTPKM 848
Query: 294 GRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHM--DP 351
G +FIS +YKQM GRAGR G+ SGES + C ++F + S++ + EP+ S + +P
Sbjct: 849 GYNFISTRLYKQMAGRAGRAGIDTSGESYLYCTDKREFDKAKSIITSDLEPVVSGLNDNP 908
Query: 352 PTLVDLILEVVAANLCSSLEDVKTLIKHTLF----------YQLKSPEDQQTFLETTLSE 401
++LE +++ + ++++ + T + +L + E L TL+E
Sbjct: 909 RQFQKIVLECISSGIANNIKIILEFFSCTFYCCNIIVPQAHKKLTALEYLTLELTNTLNE 968
Query: 402 IVASLLASKGTMLT--MNEAGH----------------LSLTSIAKAAVQAGLSHDVCLI 443
+ S K T ++ G+ T + A ++ LS D +
Sbjct: 969 LEKSGFIQKQKPKTDGIDHFGYEEKPMPPLDTPIEDVIWEPTGLGAATFKSSLSTDQARV 1028
Query: 444 IYSDLLHNKL-NFCLLNSLHMLFLVIP---LEYRIPSDGILLSRSKVYDRYTKFHPQTLR 499
+ DLL N+ L++ L + F+ P L + ++ R +Y +
Sbjct: 1029 VMKDLLANQAKGIILIDELQLCFITTPMFGLPFMKAEHWVMFKR--IYQSIQDSKKEKYA 1086
Query: 500 VAEALGVTENLVALNVTGKLKDEKKA------LLCRFFHACILYDVLNFDNHQKVAKMYG 553
+A+ +G++ + + G + +++ L CRF+ A L D++ + V+ Y
Sbjct: 1087 IAKIIGISGDYIDNKANGDSELDQQTETSLANLHCRFYVAMALCDLIQENPLSVVSARYK 1146
Query: 554 IQNSHLQNFLNVTSYFASKV 573
+ LQN + + FA V
Sbjct: 1147 LGRGTLQNLMQSSGSFAWMV 1166
>gi|261188418|ref|XP_002620624.1| DNA-directed DNA polymerase theta [Ajellomyces dermatitidis
SLH14081]
gi|239593224|gb|EEQ75805.1| DNA-directed DNA polymerase theta [Ajellomyces dermatitidis
SLH14081]
Length = 935
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 195/691 (28%), Positives = 338/691 (48%), Gaps = 63/691 (9%)
Query: 33 TKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSK 92
T+ I +CTIEK + L+ + I+E +I+++G++V+DE HML++ RG ++E +V+K
Sbjct: 260 TRATWADTDIAVCTIEKANSLVNTAIEECKINDLGVVVLDELHMLDDEHRGYLIEIMVTK 319
Query: 93 VLYLKKSIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSFDGK-- 150
++ LK+ IQI MSAT+ N L+ ++ Y+ RP E++ + ++ + K
Sbjct: 320 LMLLKQDIQIVGMSATLSNTEVLAKWLRANYYISKYRPIPIREHLVYNNEIYPATSSKEF 379
Query: 151 ----------------SLTEIYADNLDY-SLTGSGPDAVLHLVQGNLM----VLIFCSSK 189
SL D Y L S +A++ L + L+FC S+
Sbjct: 380 FRTATQLNKPDPSQRNSLACRIIDRSTYKELATSTANAMVSLALETALSGYGALVFCGSR 439
Query: 190 IACSNLALRLQFDRFPGTKEYKK---QEKEDLIEALKEENDGKLSTNLEECILYGVAYHH 246
AC + A+ L P K + + DLI L+ G + ++ ++ GVA+HH
Sbjct: 440 QACQSNAI-LISQAMPDETMLDKDLSERRMDLIAGLQSLPCG-IDPVFQKTVIKGVAFHH 497
Query: 247 ADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGRDFISLNMYKQM 306
A LT ER LI EAY G L+++ T +LAAG+NLPA+RVI+ + +GRD + M +QM
Sbjct: 498 AGLTTEERDLIAEAYDKGILRVLVATCSLAAGINLPARRVILCGARMGRDLVGPAMLRQM 557
Query: 307 VGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPT--LVDLILEVVAA 364
GRAGR G E GE+ +LC+ D + ++ A I+S + P + +LE +A
Sbjct: 558 RGRAGRKGKDEVGETYLLCQK-DDLEAVAELLEAEMPAIASGLTPEKRGIKRALLEAIAT 616
Query: 365 NLCSSLEDVKTLIKHTLFYQLKSPEDQQTFLETTLSEIVASLLASKGTMLTMNEAGHLSL 424
L SS E V + TL YQ ++ + +++TL E+V ++ + + +
Sbjct: 617 RLVSSRETVNEYVTCTLLYQNMETDELFSMVDSTLKELV------DHGLVDLKQDEYFEP 670
Query: 425 TSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEYRIPSDGILLSRS 484
T + +A V + LS + + I+ +L +F + +H+ ++ PL+ P+D + S
Sbjct: 671 TQLGQAVVSSSLSPEDGIFIHDELKRALKSFVMDGEMHIFYMFAPLQNSAPAD---IDWS 727
Query: 485 KVYDRYTKFHPQTLRVAEALGVTE---NLVALNVTGKLKDEKKALLCRFFH----ACILY 537
D+ +R + +GV N +A + T ++KDE L R +H A L
Sbjct: 728 IFRDQMNNLDESGIRALQLVGVEPAFVNKMAQSRT-RIKDET---LARIYHRAYTAFQLR 783
Query: 538 DVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELWCYKQLLTD-LPQT 596
D+ N +A+ Y I ++Q + FA+ + +FC+ + W ++ D +
Sbjct: 784 DLSNEVPISTIARKYNIPRGNVQTLTQICHGFAAGIVKFCQRMG--WDMLAVVLDHMRDR 841
Query: 597 LMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIARADAKE-----MVAKIRHLPLR 651
L +L + + VK AR L G+ +L +A AD K+ M+A+ R++ L+
Sbjct: 842 LQAGARADLLEMAQVAYVKSRTARLLWENGFKTLRALAEADPKDLLPVLMMAQPRNIDLQ 901
Query: 652 SARNLISAAKLHFITKMDKVEAMKNLIQNLQ 682
++ + +AKL +TK + + N I Q
Sbjct: 902 GSQRI--SAKL--LTKAEIIVGSANKIWESQ 928
>gi|198430821|ref|XP_002124758.1| PREDICTED: similar to DNA polymerase theta [Ciona intestinalis]
Length = 1711
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 200/711 (28%), Positives = 328/711 (46%), Gaps = 71/711 (9%)
Query: 20 LEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNE 79
++ Y G G PP + I +CTIEK + ++ LI+E +++G++V+DE HM+ +
Sbjct: 103 VDGYMG--GMSPPGG--FSSVDIAVCTIEKANSILNKLIEEKSTEQLGMVVVDELHMVGD 158
Query: 80 PQRGPILECVVSKVLYLK-KSI-------QIFAMSATIGNINALSTFIEGITYVENSRPT 131
RG +LE +++K+ YLK K I QI +SAT+ N+ +T+++G+ Y RP
Sbjct: 159 DGRGYLLELLLTKIRYLKTKEISIKTPPCQIIGLSATVTNLGLFATWLDGLVYETKFRPV 218
Query: 132 KHSEYVTVDKRVF-----QSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFC 186
S YV + K +F + D + D+ D + + N VL+FC
Sbjct: 219 PLSRYVKIGKEIFDEKLIKCRDFQPQVTFNEDDDDITA------LCYETICNNHSVLLFC 272
Query: 187 SSKIACSNLA--LRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAY 244
+K C NLA + F + GTK + ++E L+ G L L I GVAY
Sbjct: 273 PTKKWCENLANLIARNFQQINGTK-IATAGRAGILEQLRRSPAG-LDPLLHATIPIGVAY 330
Query: 245 HHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGRDFISLNMYK 304
HHA LT ER ++E + + ++ TSTL++GVNLPA+RVIIR R I L +Y+
Sbjct: 331 HHAGLTTEERDILESGFRQSYILVLVATSTLSSGVNLPARRVIIRTPIFHRALIDLRVYQ 390
Query: 305 QMVGRAGRTGLQESGESIMLCKTMQ----DFLRFSSMMNAGPEPISSHMDPPT--LVDLI 358
QM GRAGR G ++GESI++C+T + L S + + + T + +
Sbjct: 391 QMTGRAGRKGESDTGESILICRTNERNQAKLLTLSDIPPVKSCLVGKLQNKSTVRMERAV 450
Query: 359 LEVVAANLCSSLEDVKTLIKHTLFYQLKSPED------------QQTFLETTLSEIVASL 406
LEV+ + L S++ +V I+++ + S E + L+ + V L
Sbjct: 451 LEVIGSGLVSNIHEVMVYIQYSFLHAQLSSETTSSQRRRRSSNHELKLLDDIVHTCVEWL 510
Query: 407 LASKGTMLTMNEAGHLSL------TSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNS 460
+ ++ L E S+ T +A++ + L D L + +DL F L +
Sbjct: 511 VNNEFIYLQQCEEKGQSMSKKVMATQFGRASLYSSLPTDQSLQVLADLQVASRAFALDSE 570
Query: 461 LHMLFLVIPLEYRIPSDGILLSRSKVYDRYTKFHPQTLRVAEALGVTENLVALNVTGKLK 520
LH+++ + PL + +D + + S+ Y + RVA +GV E L+ +G +
Sbjct: 571 LHLIYQITPL--NVLNDWLFIDWSQYLSIYENLNGPHQRVAVLVGVEEGLLTRLASGGAR 628
Query: 521 --------DEKKALLCRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASK 572
+K + RF+ A IL D+L + Y +Q + FA
Sbjct: 629 GARFSTKLQQKITIHKRFYAALILQDILQEVPFTSICDKYDCNRGVIQALQQSAASFAGM 688
Query: 573 VYRFCEELPELWCYKQLLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLEL 632
V FC EL WC + L + L++ L L +P + RAR L AG++S +L
Sbjct: 689 VTSFCHELA-WWCMELLFNEFQSRLLFGVQRELLDLTRIPLLNNKRARGLYLAGFTSCKL 747
Query: 633 IARADAKEMVAKIR---------HLPLRSARNLISAAKLHFITKMDKVEAM 674
+A A++ E+ +R HL +A + KLH I + E +
Sbjct: 748 VAEANSSEVENILRNIHKFQSKKHLYGDNAWEVEERKKLHVIKIIGSTEGL 798
>gi|363728424|ref|XP_416549.3| PREDICTED: DNA polymerase theta [Gallus gallus]
Length = 2613
Score = 246 bits (627), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 201/709 (28%), Positives = 340/709 (47%), Gaps = 83/709 (11%)
Query: 13 AEEFKFYLE--------EYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRID 64
A+E K YL+ G G P R + + +CTIEK + LI LI+EN++D
Sbjct: 160 AKEKKCYLQALFQEVDMRVGGYMGSISPAGR-FSLLDVAVCTIEKANGLINRLIEENQMD 218
Query: 65 EIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKK---------------SIQIFAMSATI 109
+G++V+DE HML + RG +LE +++KV Y+ + IQ+ MSAT+
Sbjct: 219 SLGVVVVDELHMLGDSHRGYLLELLLTKVRYITEKAAKRKTKMKSPGFGGIQVVGMSATL 278
Query: 110 GNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGP 169
N+ L+++++ Y + RP E+V + ++ S S+ + L G
Sbjct: 279 PNLGLLASWLDAELYCTDFRPVPLKEWVKIGNNIYDS----SMNLVREFQPKLQLKGD-E 333
Query: 170 DAVLHL----VQGNLMVLIFCSSKIACSNLA--LRLQFDRFPGTKEYKKQEK-------- 215
D V+ L V VL+FC SK C LA + +F + K
Sbjct: 334 DHVVSLCYETVCDGHSVLLFCPSKNWCEKLADIIAREFYSLQQAESSAKNSSLSPVVVDR 393
Query: 216 ---EDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCT 272
+++++ L+ G L + L+ + +GVA+HHA LT ER +IE A+ T++++ T
Sbjct: 394 EGIDEVLDQLRRSLSG-LDSVLQRTLPWGVAFHHAGLTFDERDIIEGAFRQSTIRVLAAT 452
Query: 273 STLAAGVNLPAQRVIIRDSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFL 332
STL++GVNLPA+RVIIR G + + YKQM GRAGR G+ GESI++CK +
Sbjct: 453 STLSSGVNLPARRVIIRTPMFGGTLLDVLTYKQMAGRAGRKGVDTEGESILVCKPSERS- 511
Query: 333 RFSSMMNAGPEPISSHM-------DPPTLVDLILEVVAANLCSSLEDVK-----TLIKHT 380
+ ++++ +P+ S + ++ ILE++ + + ++ +DV+ TL+ +
Sbjct: 512 KGTALLQGSLKPVRSCLLRKEGEGVASSMKRAILEIIVSGVANTPDDVQTYASCTLLASS 571
Query: 381 LFYQLKSPEDQQTFLETTLSEIVASLLASKGTMLTMNEAGH-----LSLTSIAKAAVQAG 435
L + E +Q ++T E + L + + A T + A + +
Sbjct: 572 LKDNKRENEKEQDKVQTGPIEACIAWLLENEFIQVLERADDKKAKIFHPTHLGSATLSSS 631
Query: 436 LSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEYRIPSDGILLSRSKVYDRYTKFHP 495
LS + I+SDL +F L N LH+++LV P + D + + + + K
Sbjct: 632 LSPTEAMEIFSDLQRAMKSFVLENDLHIVYLVTP----VYEDWTTIDWYQFFCLWEKLPA 687
Query: 496 QTLRVAEALGVTENLVALNVTGKL--KDEKK----ALLCRFFHACILYDVLNFDNHQKVA 549
RVAE +G+ E +A +V GK+ K EK+ A+ RFF + L D+++ + +
Sbjct: 688 SMKRVAELVGIEEGFLARSVKGKITAKTEKQYRQMAIHKRFFTSLALLDLISEVPLKDMT 747
Query: 550 KMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELWCYKQLLTDLPQTLMYCRAPNLRALM 609
K YG LQ+ + +A V FC L W +LL Q+ + R L
Sbjct: 748 KKYGCSRGQLQSLQQSAATYAGMVTVFCNRLG--WHNMELLLSQFQSRLTFGV--HRELC 803
Query: 610 DLPGVKI---GRARQLLNAGYSSLELIARADAKEMVAKIRH-LPLRSAR 654
DL V + RAR L NAG+ ++ +A+A ++ +++ +P +S R
Sbjct: 804 DLVRVSLLNAQRARMLYNAGFVTVADLAKASPGDVATALKNSVPFKSGR 852
>gi|119189641|ref|XP_001245427.1| hypothetical protein CIMG_04868 [Coccidioides immitis RS]
Length = 780
Score = 245 bits (626), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 191/675 (28%), Positives = 314/675 (46%), Gaps = 52/675 (7%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V EK + L + E ++ V G YP ++ + + SI + G I + I+E
Sbjct: 72 IVQEKLKWLRRLVEGVDKRIDALVQVDGSYP-SRAKFLQSSIRVTGFFGG---INAAIEE 127
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIE 120
+IDE+G++V+DE HML++ RG ++E ++SK++ L++ IQI MSAT+ N L+ ++
Sbjct: 128 CKIDELGVVVLDELHMLDDEHRGYLIEIMISKLMLLQQDIQIVGMSATLSNTELLAKWLH 187
Query: 121 GITYVENSRPTKHSEYVTVDKRVFQSF--------------DGKSLTEIYA--------- 157
Y+ RP E++ D V+ + G + TE A
Sbjct: 188 ANYYISRYRPIPIQEFLVYDNLVYPAGKTKDFLRTAVVLNKSGATKTEALAARIIDKSVY 247
Query: 158 DNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRLQFDRFPGTKEYKK---QE 214
L+ + + L L+FC S+ AC AL + D P ++
Sbjct: 248 KELENPIINAMVSLALETAMSGYGALVFCGSRQACHMNALIIS-DAMPDDSMLDSDVLEK 306
Query: 215 KEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTST 274
+ DLI L+ G L E+ ++ GVA+HHA LTA ER LI E Y G L+++ T +
Sbjct: 307 RMDLIAGLQSLPCG-LDPVFEKTVIKGVAFHHAGLTAEERDLIAEGYDMGILKVLVATCS 365
Query: 275 LAAGVNLPAQRVIIRDSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRF 334
LAAG+NLPA+RVI+ + +GRD + M +QM GRAGR G E GE+ LC T D
Sbjct: 366 LAAGINLPARRVILCGARMGRDLVGPAMLRQMRGRAGRKGKDEIGETF-LCCTADDLEAV 424
Query: 335 SSMMNAGPEPISSHMDPPT--LVDLILEVVAANLCSSLEDVKTLIKHTLFYQLKSPEDQQ 392
+++A ISS + P + +LE VA L S E + +K +L YQ ++
Sbjct: 425 LDLLDAEMPAISSGLSPEKRGINRALLEAVATRLLSGREAINDYVKCSLIYQTMGEKELF 484
Query: 393 TFLETTLSEIVASLLASKGTMLTMNEAGHLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNK 452
+ +++TL+E+V +L + G T + +A V + S + L ++ +L
Sbjct: 485 SLVDSTLNELV------DANLLNLRFDGSFEPTQLGQAIVASAFSPEDGLFVHDELKRAL 538
Query: 453 LNFCLLNSLHMLFLVIPLEYRIPSDGILLSRSKVYDRYTKFHPQTLRVAEALGVTENLVA 512
F + +H+ ++ PL+ G+ + D K +R + +GV LV
Sbjct: 539 QAFVMDGEMHVFYMFAPLQ---SGTGVDIDWPTFRDEMNKLDDSGIRALQFMGVNPGLVN 595
Query: 513 LNVTGKLKDEKKALLCRFFH----ACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSY 568
G+ K +L R + A L D+ N VA Y ++QN +
Sbjct: 596 SMAQGR-SSIKDPILARTYQRAYTAFQLRDLSNEVPVSAVAHKYSTPRGNVQNLSQICHG 654
Query: 569 FASKVYRFCEELPELWCYKQLLTD-LPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGY 627
FA+ + +FC+ + W ++ D + L +L L + VK AR L G+
Sbjct: 655 FAAGMVKFCQRMG--WEMLAVVLDHMRDRLQAGARADLLELAQVTYVKSRTARLLWENGF 712
Query: 628 SSLELIARADAKEMV 642
+L +A ADA+++V
Sbjct: 713 KTLRALAEADARDLV 727
>gi|294948800|ref|XP_002785901.1| dna polymerase theta, putative [Perkinsus marinus ATCC 50983]
gi|239900009|gb|EER17697.1| dna polymerase theta, putative [Perkinsus marinus ATCC 50983]
Length = 1712
Score = 245 bits (626), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 199/690 (28%), Positives = 341/690 (49%), Gaps = 64/690 (9%)
Query: 7 QSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDE- 65
QSL ++A+ +K Y G G + + + I +CTIEK + L+ +L+++ +D
Sbjct: 91 QSLCRSAQ-YKVQ-AFYGGSSGNF----LAMERYDIAVCTIEKANSLVNALLEQPGVDPG 144
Query: 66 ------IGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFI 119
+G +V+DE H+L + QRG +LE +V+KV Y + QI MSAT+ N++ ++ ++
Sbjct: 145 SELSRLLGCLVLDELHLLGDSQRGYLLEVLVAKVRYFAPTCQIVGMSATLPNVSEVAAWL 204
Query: 120 EGITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIY--ADNLDYSLTGSGPDAVLHLVQ 177
+ YV + RP EYV + VF + + A+NL + + D + V
Sbjct: 205 DARLYVTDFRPVPLYEYVVCKRTVFTCDEDRVPIRALEDANNL---MPPTDTDGFMLAVW 261
Query: 178 GNLM----VLIFCSSK----IACSNLALRLQFDRFPGTKEYKKQEKEDLIEALK--EEND 227
L VL+FC SK +ACS L L + P + + L L+ N
Sbjct: 262 EALSIGNSVLVFCPSKMKCEVACSLLTKSLPWRSAPPPSQEVHHHRLQLRAELELCSCNT 321
Query: 228 GK-LSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRV 286
G L NL + +L G+A+HH+ LT ER ++E Y +G + + CTSTLAAGVNLPAQRV
Sbjct: 322 GTGLDKNLADGLLVGIAFHHSGLTTEERDIVERGYRSGAITCLACTSTLAAGVNLPAQRV 381
Query: 287 IIRDSYVGRDFISLNMYKQMVGRAGRTGLQE-SGESIMLCKTMQDFLRFSSMMNAGPEPI 345
+ R ++ +F+ Y+QM GRAGR+G SGES ++C + R +SM A P+
Sbjct: 382 VFRTPFIATEFLDTTRYRQMAGRAGRSGHSSASGESYVICSNEVEKRRVTSMAVATLPPL 441
Query: 346 SSHM--DPPTLVDLILEVVAANLCSSLEDVKTLIKHTLF-YQLKSPEDQQTFLETTLSEI 402
S + + L L+LEV+A + + L + T QL++P +++ + +
Sbjct: 442 RSALGQNCVGLQRLLLEVMATAGQMRDDQIMRLARSTFLDRQLEAPGNEKKRRNSVADDF 501
Query: 403 VA-----SLLASKGTMLTMNEAGHLSL-TSIAKAAVQAGLSHDVCLIIYSDL--LHNKLN 454
A L S G M+ N L + T + +A +GLS + ++++ +L L N+
Sbjct: 502 PAVHAGMKYLLSSG-MVYFNRDSQLYMATHLGRAVCASGLSCEAGIVLWEELKRLRNETG 560
Query: 455 FCLLNSLHMLFLVIPLEYRIPSDGILLSRSKVYDRYTKFHPQTLRVAEALGVT-ENLVAL 513
CL LH+++L P E + S+ ++ + + + Q E +G++ +
Sbjct: 561 LCLEGDLHLVYLATPWEASV-SESLIDWNTYAAVVESDLNRQQQASLEVIGISMAKIQQA 619
Query: 514 NVTGKLKD---EKKALLCR----FFHACILYDVLNFDNHQKVAKMYG--IQNSHLQNFLN 564
++ G+L ++ CR F+ +++D++ ++V +G I LQ+ ++
Sbjct: 620 SIQGRLSQAVKDRDPDGCRRVVKFYSTLLIWDLMCERPIEQVIHRFGTKIGRGLLQSLIS 679
Query: 565 VTSYFASKVYRFCEELPELWCYKQLLTDLPQTL------MYCRAPNLRALMDLPGVKIGR 618
S F S + FC +L W ++L + T M R P L AL ++P +
Sbjct: 680 SASAFTSCIAVFCGKL--RW---RILESVFDTFAGRLSSMCHRRPELLALSEIPKLSPAW 734
Query: 619 ARQLLNAGYSSLELIARADAKEMVAKIRHL 648
ARQL +AG+ S +++A A +E+ A +R +
Sbjct: 735 ARQLYDAGFVSPKMVAGATPQELQAVLRRV 764
>gi|391331047|ref|XP_003739962.1| PREDICTED: DNA polymerase theta-like [Metaseiulus occidentalis]
Length = 1916
Score = 245 bits (626), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 197/668 (29%), Positives = 337/668 (50%), Gaps = 58/668 (8%)
Query: 42 IYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKK--- 98
I +CTIEK + LI L++E+ IDEI +V+DE HML E QRG +LE +++K+++ ++
Sbjct: 149 IAVCTIEKANALINKLLEEDVIDEICCVVVDELHMLGESQRGYLLELLLTKLIFYRRQNE 208
Query: 99 --SIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIY 156
IQI MSAT+ N++ ++ +++ Y + RP +E + V + + I
Sbjct: 209 NCDIQIIGMSATLPNLDLIAGWLDAALYTTDFRPVPLTECLKVGAESPRDITTSAEASIP 268
Query: 157 -------ADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALR-----LQFDRF 204
D++D +L+ ++H V VL+F +K C ++ + L R
Sbjct: 269 LLRFPLPVDDVDGALS-----LIVHTVSLGFGVLVFLPTKAWCETMSQQIARAFLAVGRP 323
Query: 205 P-------------GTK---EYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHAD 248
P G K +Q +D++E LK+ G L E+ + +GVA+HHA
Sbjct: 324 PPDPESVPPDLLELGVKLRAVNNRQAIQDVLEQLKQSPAG-LDKVFEKTVPFGVAFHHAG 382
Query: 249 LTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGRDFISLNMYKQMVG 308
LT ER +IE A+ AG + ++ TSTL++GVNLPA+RVIIR GR + + YKQM+G
Sbjct: 383 LTFDERDIIENAFKAGIINVLTATSTLSSGVNLPARRVIIRTPIFGRQLLDVMTYKQMIG 442
Query: 309 RAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVD-----LILEVVA 363
RAGR G+ E GESI++CK + + + + P+ S + V I+EV+A
Sbjct: 443 RAGRKGIDERGESILMCKE-NERAQATRLATMKLHPVRSCLSSRGSVSSGLKRAIMEVIA 501
Query: 364 ANLCSSLEDVKTLIKHTLFYQLKSPEDQQTFLETTLSEIVASLLASKG-TMLTMNEAGHL 422
+ SL+D+ T I+ T + K ED ++ + V L+ + ++ T ++ G +
Sbjct: 502 SGKVKSLKDIDTYIECT--FSSKCIEDHDDGSTSSAKDCVDYLVKNDFISVCTEDDEGRV 559
Query: 423 SLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEYRIPSDGILLS 482
+ T + A + + LS D L++ +L ++ +F L N LH+++ V P Y I S+ +
Sbjct: 560 TPTKLGLAVLASSLSPDQALLVLRELKKSRQSFVLENDLHIIYEVTP--YFI-SEQAAID 616
Query: 483 RSKVYDRYTKFHPQTLRVAEALGVTENLVALNV----TGKLKDEKKALLCRFFHACILYD 538
++ + Y RVAE +G V+ + + + K L RF+ A L +
Sbjct: 617 WMRLMETYDALTEDRKRVAEVIGFEPAFVSKCIRAAASKREMSSKVTLHQRFYVALALNE 676
Query: 539 VLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELWCYKQLL-TDLPQTL 597
++ +V++ +G+Q LQN + FA V FC+ L W +LL + + L
Sbjct: 677 LVQEVPLSEVSEKFGLQKGLLQNLQQSAATFAGMVSIFCKRLG--WHNLELLISQFQKRL 734
Query: 598 MYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIARADAKEMVAKIRHLPLRSARNLI 657
+ L L+ L + AR L NAG+++L +ARA+ E+ + +R+ N
Sbjct: 735 HFGVQQELCELLQLVPMTAQVARILFNAGFTNLPQVARAELHEVESALRNARAYQTNNGE 794
Query: 658 SAAKLHFI 665
S++++ +I
Sbjct: 795 SSSEVRWI 802
>gi|225562983|gb|EEH11262.1| helicase and polymerase containing protein tebichi [Ajellomyces
capsulatus G186AR]
Length = 958
Score = 244 bits (624), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 186/642 (28%), Positives = 314/642 (48%), Gaps = 46/642 (7%)
Query: 33 TKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSK 92
T+ I +CTIEK + L+ + I+E I+++G++V+DE HML++ RG ++E +V+K
Sbjct: 259 TRATWTDTDIAVCTIEKANSLVNAAIEECSINDLGVVVLDELHMLDDEHRGYLIEIMVTK 318
Query: 93 VLYLKKSIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSFDGKSL 152
+L L++ IQI MSAT+ N L+ ++ Y+ RP E++ + ++ + K
Sbjct: 319 LLLLQQDIQIVGMSATLSNTEVLAKWLHANYYISKYRPIPIQEHLVYNNAIYPATSSKEF 378
Query: 153 --TEIYADNLD----YSLTGSGPDAVLHLVQGN----LMV-------------LIFCSSK 189
T + + D YSL D +H GN MV L+FC S+
Sbjct: 379 FRTAMQLNKPDSSPNYSLACRIIDRSMHKELGNPTANAMVSLALETALSGYGALVFCGSR 438
Query: 190 IACSNLALRLQFDRFPGTKEYKK---QEKEDLIEALKEENDGKLSTNLEECILYGVAYHH 246
AC + A+ L P + + DLI L+ G L L+ ++ GVA+HH
Sbjct: 439 QACQSNAV-LVSHAMPDETALDNDLLERRMDLIAGLQSLPCG-LDPVLQMTVIKGVAFHH 496
Query: 247 ADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGRDFISLNMYKQM 306
A LT ER LI EAY GTL+++ T +LAAG+NLPA+RVI+ + +GRD + M +QM
Sbjct: 497 AGLTTEERDLIAEAYDKGTLRVLIATCSLAAGINLPARRVILCGARMGRDLVGPAMLRQM 556
Query: 307 VGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPT--LVDLILEVVAA 364
GRAGR G E GE+ + C+ D + ++ A I+S + P + +LE +A
Sbjct: 557 RGRAGRKGKDEVGETYLCCQK-DDLEAVAELLEAEMPAIASGLTPEKRGIKRALLEAIAT 615
Query: 365 NLCSSLEDVKTLIKHTLFYQLKSPEDQQTFLETTLSEIVASLLASKGTMLTMNEAGHLSL 424
L SS E + + TL YQ + + ++ TL ++V ++ + +A
Sbjct: 616 RLVSSRESINEYVMCTLLYQNMEAAELFSMVDKTLEDLV------DNGLVDLEQAESYEP 669
Query: 425 TSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEYRIPSDGILLSRS 484
T + +A V + LS + + I+ +L +F + +H+ ++ PL+ P+D + S
Sbjct: 670 TRLGQAVVSSSLSPEDGIFIHDELKRALKSFVMDGEMHIFYMFAPLQNSSPTD---IDWS 726
Query: 485 KVYDRYTKFHPQTLRVAEALGVTENLV-ALNVTG-KLKDEKKA-LLCRFFHACILYDVLN 541
D+ +R + +GV V + +G ++KDE A + R + A L D+ N
Sbjct: 727 IFRDQMNNLDESGIRALQFVGVEPAFVNKMAQSGTRIKDETIARIYQRAYTAFQLRDLSN 786
Query: 542 FDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELWCYKQLLTDLPQTLMYCR 601
+A+ Y I ++Q FA+ + +FC+ + W ++ D + ++
Sbjct: 787 EVPISTIAQRYNIPRGNVQTLAQTCHGFAAGIVKFCQRMG--WDMLAVVLDHMRDRLHAG 844
Query: 602 A-PNLRALMDLPGVKIGRARQLLNAGYSSLELIARADAKEMV 642
A +L + + VK AR L G+ SL +A AD K++V
Sbjct: 845 ARADLLEMAQVAYVKSRTARLLWENGFKSLRALAEADPKDLV 886
>gi|195145962|ref|XP_002013959.1| GL23113 [Drosophila persimilis]
gi|194102902|gb|EDW24945.1| GL23113 [Drosophila persimilis]
Length = 2193
Score = 244 bits (623), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 194/673 (28%), Positives = 330/673 (49%), Gaps = 62/673 (9%)
Query: 15 EFKFYLEE--------YAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEI 66
E FYL++ G G Y P + + ICTIEK + ++ L+++ ++D I
Sbjct: 268 EKTFYLQDLLTPAGHRVEGFFGGYTPPG-GFDSIDVAICTIEKANSIVNKLMEQGKLDVI 326
Query: 67 GLIVIDEFHMLNEPQRGPILECVVSKVLYLKK----SIQIFAMSATIGNINALSTFIEGI 122
G +V+DE H+++E RG ILE +++K+LY+ + IQ+ MSAT+ N+ L +++
Sbjct: 327 GTVVVDEVHLISEKGRGYILELLLAKILYMSRKNALQIQVITMSATLANVELLRRWLDAE 386
Query: 123 TYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLM- 181
Y+ N RP E + V +++ A + + D V L L+
Sbjct: 387 LYITNYRPVALQEMIKVGTKIYDH--QLEFQRDIAQQSEVPCLTNDSDHVAQLCIETLLE 444
Query: 182 ---VLIFCSSKIACSNLALRLQFDRF----PGTKEYKK-------QEKEDLIEALKEEND 227
V++FC S+ C +LA++L GT+ ++ + ED+ + L++
Sbjct: 445 GCSVIVFCPSRDWCESLAVQLAIAIHGLIKSGTELSRRLRSNLNPEAIEDVKQQLRDIPT 504
Query: 228 GKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVI 287
G L + + + + Y A+HHA LT ER ++E + AG L+++ TSTL++GVNLPA+RVI
Sbjct: 505 G-LDSTMSKAVTYACAFHHAGLTTEERDIVEACFKAGALKVLVATSTLSSGVNLPARRVI 563
Query: 288 IRDSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLC-KTMQDFLRFSSMMNAGPEPIS 346
IR G++ +S Y+QM+GRAGRTG GESI++C ++ Q R ++ A +PIS
Sbjct: 564 IRSPLFGKNQMSSLTYRQMIGRAGRTGKDTLGESILICTESNQRVGR--DLVQAQLQPIS 621
Query: 347 S--HMDPPT-LVDLILEVVAANLCSSLEDVKTLIKHTLFYQLKS----PEDQQT------ 393
S MD T L +LEV+++ + S+ +++ + + TL K+ E+QQ
Sbjct: 622 SCLEMDESTHLKRALLEVISSGVASTRQEIDSFVNCTLLSAEKAMAKLSEEQQVQGGEDC 681
Query: 394 ---FLETTLSEIVASLLASKGTMLTMNEAGHLSLTSIAKAAVQAGLSHDVCLIIYSDLLH 450
F++ L ++ A ++ T + A + + + LI++++L
Sbjct: 682 SSHFIDDVLDFLIDYEFIRHQVDEEAGTANYVG-THLGAACLASSMPPGDGLILFAELQK 740
Query: 451 NKLNFCLLNSLHMLFLVIPLE--YRIPSDGILLSRSKVYDRYTKFHPQTLRVAEALGVTE 508
+ F L LH ++LV P Y++ LL D + K P RV E +GV E
Sbjct: 741 ARRTFVLDTDLHAVYLVTPYSVCYQLQDLDWLL----YLDMWEKLSPAMKRVGELVGVKE 796
Query: 509 NLVALNVTGKLKDEKKALLC--RFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVT 566
+ + G+ K + K + RF+ A L +++N VA + LQ ++
Sbjct: 797 AFLIRAMRGQSKLDYKQMQIHKRFYTALALKELINETPINVVAHKFKCNRGVLQGLQQIS 856
Query: 567 SYFASKVYRFCEELPELWCYKQLLTD-LPQTLMYCRAPNLRALMDLPGVKIGRARQLLNA 625
S FA V FC+ L W L+ + L + +L LM LP + RAR + +A
Sbjct: 857 STFAGIVTAFCKSLK--WSTIALIVEQFKDRLFFGIHIDLIDLMQLPDLSQKRARAIYDA 914
Query: 626 GYSSLELIARADA 638
G++++ +A ADA
Sbjct: 915 GFTTVVELAGADA 927
>gi|296081899|emb|CBI20904.3| unnamed protein product [Vitis vinifera]
Length = 2091
Score = 244 bits (623), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 198/682 (29%), Positives = 306/682 (44%), Gaps = 92/682 (13%)
Query: 4 EKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRI 63
EK + L E ++ Y G +G K S+ +CTIEK + LI L++E R+
Sbjct: 566 EKAEHLEVLLEPLGKHVRSYYGNQGGGTLPK----DTSVAVCTIEKANSLINRLLEEGRL 621
Query: 64 DEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGIT 123
EIG+IVIDE HM+ + RG +LE +++K+ Y + ++S N++ ++ +++
Sbjct: 622 SEIGIIVIDELHMVGDQNRGYLLELLLTKLRYAAGEGHVESVSGESSNMSTVADWLQAAL 681
Query: 124 YVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHL----VQGN 179
Y + RP EY+ V ++ K + I + L G PD ++ L VQ
Sbjct: 682 YQTDFRPVPLEEYIKVGNTIYD----KKMDIIRTISKTADLGGKDPDHIVELCNEVVQEG 737
Query: 180 LMVLIFCSSKIACSNLALRLQ--FDRFPGTKEYKKQEKEDL---IEALKEENDGKLSTNL 234
VL+FCSS+ C A + +F E D+ I+AL+ G L L
Sbjct: 738 HSVLLFCSSRKGCEFTARHVSKFLKKFSTNAHNNTGEFVDISSAIDALRRSPAG-LDPIL 796
Query: 235 EECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVG 294
EE + GVAYHHA LT ER ++E Y G L+++ TSTLAAGVNLPA+RVI R +G
Sbjct: 797 EETLPSGVAYHHAGLTVEERDIVETCYRKGLLRVLTATSTLAAGVNLPARRVIFRQPRIG 856
Query: 295 RDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHM--DPP 352
RDFI YKQM GRAGRTG+ GES+++CK ++ R ++N P+ S + D
Sbjct: 857 RDFIDGTRYKQMAGRAGRTGIDTKGESVLICKP-EEVKRICGLLNESCPPLYSCLSEDKN 915
Query: 353 TLVDLILEVVAANLCSSLEDVKTLIKHTLFYQLKSPEDQQTFLETTLSEIVASLLASKGT 412
+ ILEVVA+ + + D+ ++ L + ED + +
Sbjct: 916 GMTHAILEVVASGIVQTANDINRYVRKFLEWN----EDTKLY------------------ 953
Query: 413 MLTMNEAGHLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEY 472
S T + +AA + L + L++ DL + F L + LH+++LV P+
Sbjct: 954 ----------STTPLGRAAFGSSLCPEESLVVLDDLSRAREGFVLASDLHLVYLVTPINV 1003
Query: 473 RIPSDGILLSRSKVYDRYTKFHPQTLRVAEALGVTE------------------------ 508
+ D L Y+R+ + V +GV E
Sbjct: 1004 DVEPDWELF-----YERFMQLSALDQSVGNRVGVVEPFLMRMAHGAPMCASNKSRNNGKG 1058
Query: 509 ------NLVALNVTGKLKDEKKALLC-RFFHACILYDVLNFDNHQKVAKMYGIQNSHLQN 561
N + + L DE+ +C RF+ A IL ++ +V + + + +Q
Sbjct: 1059 LHDKFDNRLGITKCSLLSDEQTLRVCKRFYVALILSKLVQEVPVTEVCEAFKVARGMVQG 1118
Query: 562 FLNVTSYFASKVYRFCEELPELWC-YKQLLTDLPQTLMYCRAPNLRALMDLPGVKIGRAR 620
FAS V FCE L W + L+ + + + L +P VK RAR
Sbjct: 1119 LQENAGRFASMVSLFCERLG--WNDLEGLVAKFQNRVSFGVRAEIVELTTIPYVKGSRAR 1176
Query: 621 QLLNAGYSSLELIARADAKEMV 642
L AG + IA A E+V
Sbjct: 1177 ALYKAGLRTPLAIAEASIPEIV 1198
>gi|390177772|ref|XP_001358456.3| GA19301 [Drosophila pseudoobscura pseudoobscura]
gi|388859190|gb|EAL27595.3| GA19301 [Drosophila pseudoobscura pseudoobscura]
Length = 1998
Score = 244 bits (623), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 197/661 (29%), Positives = 324/661 (49%), Gaps = 67/661 (10%)
Query: 25 GVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGP 84
G G Y P + + ICTIEK + ++ L+++ ++ IG +V+DE H+++E RG
Sbjct: 286 GFFGGYTPPG-GFDSIDVAICTIEKANSIVNKLMEQGKLGVIGTVVVDEVHLISEKGRGY 344
Query: 85 ILECVVSKVLYLKK----SIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVD 140
ILE +++K+LY+ + IQ+ MSAT+ N+ L +++ Y+ N RP E + V
Sbjct: 345 ILELLLAKILYMSRKNALQIQVITMSATLANVELLRRWLDAELYITNYRPVALQEMIKVG 404
Query: 141 KRVFQSFDGKSLTEIYADNLDYS----LTGSGPDAVLHLVQGNLM----VLIFCSSKIAC 192
+++ E D S LT D V L L+ V++FC S+ C
Sbjct: 405 TKIYDHH-----LEFQRDITQQSEVPCLTNDS-DHVAQLCIETLLEGCSVIVFCPSRDWC 458
Query: 193 SNLALRLQFDRF----PGTKEYKK-------QEKEDLIEALKEENDGKLSTNLEECILYG 241
+LA++L GT+ ++ + ED+ + L++ G L + + + + Y
Sbjct: 459 ESLAVQLAIAIHGLIKSGTELSRRLRSNLNPEAIEDVKQQLRDIPTG-LDSTMSKAVTYA 517
Query: 242 VAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGRDFISLN 301
A+HHA LT ER ++E + AG L+++ TSTL++GVNLPA+RVIIR G++ +S
Sbjct: 518 CAFHHAGLTTEERDIVEACFKAGALKVLVATSTLSSGVNLPARRVIIRSPLFGKNQMSSL 577
Query: 302 MYKQMVGRAGRTGLQESGESIMLC-KTMQDFLRFSSMMNAGPEPISS--HMDPPT-LVDL 357
Y+QM+GRAGRTG GESI++C ++ Q R ++ A +PISS MD T L
Sbjct: 578 TYRQMIGRAGRTGKDTLGESILICTESNQRVGR--DLVQAQLQPISSCLEMDESTHLKRA 635
Query: 358 ILEVVAANLCSSLEDVKTLIKHTLFYQLKS----PEDQQTFLETTLSEIVASLL------ 407
+LEV++A + S+ +++ + + TL K+ E+QQ E S + +L
Sbjct: 636 LLEVISAGVASTRQEIDSFVNCTLLSAEKAMAKLSEEQQQGAEDCSSHFIDDVLDFLVDY 695
Query: 408 -----ASKGTMLTMNEAGHLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLH 462
T N G T + A + + + LI++++L + F L LH
Sbjct: 696 EFIRHQVDEEAGTANYVG----THLGAACLASSMPPGDGLILFAELQKARRTFVLDTDLH 751
Query: 463 MLFLVIPLE--YRIPSDGILLSRSKVYDRYTKFHPQTLRVAEALGVTENLVALNVTGKLK 520
++LV P Y++ LL D + K P RV E +GV E + + G+ K
Sbjct: 752 AVYLVTPYSVCYQLQDLDWLL----YLDMWEKLSPAMKRVGELVGVKEAFLIRAMRGQSK 807
Query: 521 DEKKALLC--RFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCE 578
+ K + RF+ A L +++N VA + LQ ++S FA V FC+
Sbjct: 808 LDYKQMQIHKRFYTALALKELINETPIHVVAHKFKCNRGVLQGLQQISSTFAGIVTAFCK 867
Query: 579 ELPELWCYKQLLTD-LPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIARAD 637
L W L+ + L + +L LM LP + RAR + +AG++++ +A AD
Sbjct: 868 SLK--WSTIALIVEQFKDRLFFGIHIDLIDLMQLPDLSQKRARAIYDAGFTTVVELAGAD 925
Query: 638 A 638
A
Sbjct: 926 A 926
>gi|157888638|emb|CAE47762.2| novel protein similar to humna DNA-directed polymerase theta (POLQ)
[Danio rerio]
Length = 2239
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 199/682 (29%), Positives = 323/682 (47%), Gaps = 92/682 (13%)
Query: 42 IYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKK--- 98
+ +CTIEK + L+ LI+E+++D +G +V+DE HM+ + RG +LE +++K+ Y+ +
Sbjct: 132 VAVCTIEKANGLVNRLIEEDKLDLLGTVVVDELHMVGDSGRGYLLELLLTKIRYIAQKTA 191
Query: 99 ----------SIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSFD 148
+QI MSAT+ N++ L+ ++ Y N RP E+V +
Sbjct: 192 TRNSGQSTSTGVQIIGMSATLPNLDLLARWLSAELYSTNYRPVPLMEWVKIG-------- 243
Query: 149 GKSLTEIYADNLDYSLTGSGPDAVLHL----VQGNLMVLIFCSSKIACSNLALRLQFDRF 204
T IY D SL D ++ L VQ L+FC SK C LA +
Sbjct: 244 ----TNIY----DGSLNLGDDDHIVSLCFETVQDGHSALLFCPSKNWCEKLADSI----- 290
Query: 205 PGTKEYKKQEKE------------------DLIEALKEENDGKLSTNLEECILYGVAYHH 246
G + Y KE D++ LK G L L+ + +GVA+HH
Sbjct: 291 -GREFYNLHHKEMQSGSGGQSIFLNQEGLLDVLAQLKRTPAG-LDHVLQRTVPWGVAFHH 348
Query: 247 ADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGRDFISLNMYKQM 306
A LT ER ++E A+ G ++++ TSTL++GVNLPA+RVIIR + + YKQM
Sbjct: 349 AGLTFDERDILEGAFRQGYIRVLAATSTLSSGVNLPARRVIIRTPVFNGHLLDILTYKQM 408
Query: 307 VGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDP-------PTLVDLIL 359
VGRAGR G+ GES+++CK + + S++ +PISS + +++ IL
Sbjct: 409 VGRAGRKGVDTIGESVLVCKEAER-AKGMSLIQGSLKPISSCLVKREGEGVTTSMLRAIL 467
Query: 360 EVVAANLCSSLEDVKTLIKHTLF-YQLKSPEDQQTFLETTLSEIVASLLASKGTMLTMNE 418
E++ + SS +DV+ TL + + E Q E+ A + + L NE
Sbjct: 468 EIIVGGVASSPQDVRMYAACTLLAASIAAEEAHQDGSESEARNKGA--IEACIEWLMDNE 525
Query: 419 AGHLS---------LTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIP 469
H+ T + A + + LS L I++DL F L N LH+L+ + P
Sbjct: 526 FIHIQKEGDVERYCPTHLGSATLSSSLSPPEALGIFADLQRAMKGFVLENDLHILYQITP 585
Query: 470 LEYRIPSDGILLSRSKVYDRYTKFHPQTLRVAEALGVTENLVALNVTGKL--KDEKK--- 524
+ D + + + + + RVAE +G+ E +A +V GKL K EK+
Sbjct: 586 VYV----DWTTIDWYQFFCLWEQLPSAMKRVAEMVGIQEGFLARSVGGKLIAKTEKQRRQ 641
Query: 525 -ALLCRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPEL 583
A+ RFF +L D+++ + VAK YG LQ+ S +A V FC L
Sbjct: 642 MAIHKRFFTTLVLLDLVSEEPLGAVAKKYGCSRGQLQSLQQSASTYAGMVTVFCNRLG-- 699
Query: 584 W-CYKQLLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIARADAKEMV 642
W + LL+ L + L L+ + + RAR L ++G+ ++ +ARAD E+
Sbjct: 700 WHNLELLLSQFQSRLSFGVQRELCDLVRISLLTAQRARTLYSSGFVTVAELARADVSEVE 759
Query: 643 AKIRH-LPLRSARNLISAAKLH 663
+R +P +S+R + +++
Sbjct: 760 KALRKAIPFKSSRQAVDESEVE 781
>gi|108862506|gb|ABA97168.2| DNA polymerase I family protein, expressed [Oryza sativa Japonica
Group]
Length = 2065
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 201/709 (28%), Positives = 318/709 (44%), Gaps = 92/709 (12%)
Query: 4 EKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRI 63
EK + L + E ++ + G +G K S+ +CTIEK + L+ L++E R+
Sbjct: 565 EKAEHLEQLLEPLGRHVRSFYGNQGGGSLPK----DTSVAVCTIEKANSLVNKLLEEGRL 620
Query: 64 DEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKK-----------------------SI 100
E+G+IVIDE HM+ + RG +LE +++K+ Y +
Sbjct: 621 SELGIIVIDELHMVGDQHRGYLLELMLTKLRYAAGEGNSESSSGEISGSSSGKMDATHGL 680
Query: 101 QIFAMSATIGNINALSTFIE--------GITYVENSRPTKHSEYVTVDKRVFQSFDGKSL 152
QI MSAT+ N+ A++ +++ Y RP E++ V +VF K +
Sbjct: 681 QIIGMSATMPNVAAVADWLQKDEEFTAQAALYQTEFRPVPLEEFIKVGNQVFD----KDM 736
Query: 153 TEIYADNLDYSLTGSGPDAVLHL----VQGNLMVLIFCSSKIACSNLALRL-QFDRFP-- 205
+ L G PD ++ L VQ VL+FCSS+ C + A + +F +
Sbjct: 737 NVVRVLPKVADLGGKDPDHIVELCNEVVQQGHSVLLFCSSRKGCESTARHVAKFLKVASV 796
Query: 206 GTKEYKKQ--EKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLA 263
G+ + + + +EALK G L LEE + GVAYHHA LT ER ++E Y
Sbjct: 797 GSSDVGSEFPDATFAVEALKRSPSG-LDPVLEETLPSGVAYHHAGLTVEEREIVETCYRK 855
Query: 264 GTLQIICCTSTLAAGVNLPAQRVIIRDSYVGRDFISLNMYKQMVGRAGRTGLQESGESIM 323
G ++++ TSTLAAGVNLPA+RVI R +GRDFI YKQM GRAGRTG+ GESI+
Sbjct: 856 GLVRVLAATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYKQMSGRAGRTGIDTKGESIL 915
Query: 324 LCKTMQDFLRFSSMMNAGPEPISSHM--DPPTLVDLILEVVAANLCSSLEDVKTLIKHTL 381
+CK ++ R + ++ + P+ S + D + I+EVVA + + D+ ++ TL
Sbjct: 916 VCKP-EEVKRITGILRSNCTPLESCLSEDKNGMTHAIMEVVAGGIVQTASDIHRYVRCTL 974
Query: 382 FYQLKSPEDQQTFLETTLSEIVASLLASKGTMLTMNEAGHLSLTSIAKAAVQAGLSHDVC 441
K ED + +L L K + NE S T + AA + L+ +
Sbjct: 975 LNSTKPFEDVVKSAQDSL-----RWLCHKRFLEWNNETKIYSTTPLGLAAFGSSLNPEES 1029
Query: 442 LIIYSDLLHNKLNFCLLNSLHMLFLVIPLEYRIPSDGILLSRSKVYDRYTKFHPQTLRVA 501
L++ DL + F L LH+++LV P+ + D L Y+R+ + V
Sbjct: 1030 LVVLDDLSRAREGFVLACDLHLVYLVTPINVDVEPDWELY-----YERFMQLTSLEQSVG 1084
Query: 502 EALGVTENLV-------ALNVTGK--------------------LKDEKKALLCRFFHAC 534
+GV E + A+ V GK + ++ + RF+ A
Sbjct: 1085 NRVGVIEPFLMHMAHGAAMPVRGKPQRAGIRNRSPTRGSGGNALINEQALRVSKRFYVAL 1144
Query: 535 ILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELWC-YKQLLTDL 593
+L + V + + + +Q FAS V FC+ L W + L+
Sbjct: 1145 MLSRLAQEIPVTDVCEAFKVARGMIQALQENAGRFASMVSVFCQRLG--WHDLEGLVAKF 1202
Query: 594 PQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIARADAKEMV 642
+ + + L +P VK RAR L +G + IA A E+
Sbjct: 1203 QNRVCFGVRAEIAELTSIPFVKGSRARALYKSGLRTPVAIAEASIPEIA 1251
>gi|3063700|emb|CAA18591.1| putative protein [Arabidopsis thaliana]
gi|7270174|emb|CAB79987.1| putative protein [Arabidopsis thaliana]
Length = 1548
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 191/679 (28%), Positives = 304/679 (44%), Gaps = 122/679 (17%)
Query: 41 SIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKK-- 98
S+ +CTIEK + LI L++E R+ E+G+IVIDE HM+ + RG +LE +++K+ Y
Sbjct: 57 SVAVCTIEKANSLINRLLEEGRLSELGIIVIDELHMVGDQHRGYLLELMLTKLRYAAGEG 116
Query: 99 ---------------------SIQIFAMSATIGNINALSTFIE-----------GITYVE 126
+QI MSAT+ N+ A++ +++ Y
Sbjct: 117 SSESSSGESSGTSSGKADPAHGLQIVGMSATMPNVGAVADWLQVSKTNHNLCVYAALYQT 176
Query: 127 NSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHL----VQGNLMV 182
RP EY+ V ++ K + + + G PD ++ L VQ V
Sbjct: 177 EFRPVPLEEYIKVGSTIYN----KKMEVVRTIPKAADMGGKDPDHIVELCNEVVQEGNSV 232
Query: 183 LIFCSSKIACSNLALRLQ--FDRFPGTKEYKKQEKEDL---IEALKEENDGKLSTNLEEC 237
LIFCSS+ C + A + P + + E D+ I+AL+ G + LEE
Sbjct: 233 LIFCSSRKGCESTARHISKLIKNVPVNVDGENSEFMDIRSAIDALRRSPSG-VDPVLEET 291
Query: 238 ILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGRDF 297
+ GVAYHHA LT ER ++E Y G ++++ TSTLAAGVNLPA+RVI R +GRDF
Sbjct: 292 LPSGVAYHHAGLTVEEREIVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPMIGRDF 351
Query: 298 ISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHM--DPPTLV 355
I YKQM GRAGRTG+ G+S+++CK + R +++N P+ S + D +
Sbjct: 352 IDGTRYKQMSGRAGRTGIDTKGDSVLICKP-GELKRIMALLNETCPPLQSCLSEDKNGMT 410
Query: 356 DLILEVVAANLCSSLEDVKTLIKHTLFYQLKSPEDQQTFLETTLSEIVASLLASKGTMLT 415
ILEVVA + + +D+ ++ L + +++T L TT
Sbjct: 411 HAILEVVAGGIVQTAKDIHRYVRKFLEW------NEETKLYTT----------------- 447
Query: 416 MNEAGHLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEYRIP 475
T + + + + L + LI+ DLL + + + LH+++LV P+ +
Sbjct: 448 ---------TPLGRGSFGSSLCPEESLIVLDDLLRAREGLVMASDLHLVYLVTPINVGVE 498
Query: 476 SDGILLSRSKVYDRYTKFHPQTLRVAEALGVTENL------------------VALNVTG 517
+ L Y+R+ + P V +GV E V N+ G
Sbjct: 499 PNWELY-----YERFMELSPLEQSVGNRVGVVEPFLMRMAHGATVRTLNRPQDVKKNLRG 553
Query: 518 K------------LKDEKKALLC-RFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLN 564
+ L DE+ +C RFF A IL ++ + +V + + + +Q
Sbjct: 554 EYDSRHGSTSMKMLSDEQMLRVCKRFFVALILSKLVQEASVTEVCEAFKVARGMVQALQE 613
Query: 565 VTSYFASKVYRFCEELPELWC-YKQLLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLL 623
F+S V FCE L W + L+ + + + L +P +K RAR L
Sbjct: 614 NAGRFSSMVSVFCERLG--WHDLEGLVAKFQNRVSFGVRAEIVELTSIPYIKGSRARALY 671
Query: 624 NAGYSSLELIARADAKEMV 642
AG + + IA A E+V
Sbjct: 672 KAGLRTSQAIAEASIPEIV 690
>gi|157786800|ref|NP_001099348.1| DNA polymerase theta [Rattus norvegicus]
gi|149060535|gb|EDM11249.1| polymerase (DNA directed), theta (predicted), isoform CRA_a [Rattus
norvegicus]
Length = 2547
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 200/719 (27%), Positives = 349/719 (48%), Gaps = 98/719 (13%)
Query: 13 AEEFKFYLE---EYAGVK-----GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRID 64
A+E K+YL+ + G+K G PT R + + +CTIE+ + LI LI+EN++D
Sbjct: 151 AKEKKYYLQSLFQEVGIKVDGYMGSTSPTGR-FSSLDVAVCTIERANGLINRLIEENKMD 209
Query: 65 EIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKK---------------SIQIFAMSATI 109
+G +V+DE HML + RG +LE +++KV ++ + ++QI MSAT+
Sbjct: 210 LLGTVVVDELHMLGDSHRGYLLELLLTKVCFVTRKSASCQADSASALACAVQIVGMSATL 269
Query: 110 GNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSF-----DGKSLTEIYADNLDYSL 164
N+ +++++ Y + RP E + V ++ S + + L ++ D
Sbjct: 270 PNLQLVASWLNAELYHTDFRPVPLLESIKVGNSIYDSSMKLVREFQPLLQVKGDE----- 324
Query: 165 TGSGPDAVLHL----VQGNLMVLIFCSSKIACSNLA---------LRLQFDRFPGTKEYK 211
D ++ L V+ N VL+FC SK C +A L Q + + E+
Sbjct: 325 -----DHIVSLCYETVRDNHSVLVFCPSKKWCEKVADIIAREFYNLHHQPEGLVKSSEFP 379
Query: 212 -----KQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTL 266
++ ++I+ LK G L + L+ + +GVA+HHA LT ER +IE A+ G +
Sbjct: 380 PVILDQKSLLEVIDQLKRSPSG-LDSVLKNTVPWGVAFHHAGLTFEERDIIEGAFRQGLI 438
Query: 267 QIICCTSTLAAGVNLPAQRVIIRDSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCK 326
+++ TSTL++GVNLPA+RVIIR G + + YKQMVGRAGR G+ GESI++CK
Sbjct: 439 RVLAATSTLSSGVNLPARRVIIRTPVFGGQPLDILTYKQMVGRAGRKGVDTMGESILVCK 498
Query: 327 TMQDFLRFSSMMNAGPEPISSHMDP-----PTLVDLILEVVAANLCSSLEDVKTLIKHTL 381
+ + +++ EP+ S + T++ ILE++ + + S+ +D++T T
Sbjct: 499 NSEKS-KGIALLQGSLEPVHSCLQSQGEVTSTMIRAILEIIVSGVASTSQDMQTYAACTF 557
Query: 382 F----------YQLKSPEDQQTFLETTLS-----EIVASLLASKGTMLTMNEAGHLSLTS 426
Q + Q+ ++ ++ E + + S GT + HL
Sbjct: 558 LAADVKEGKQGIQRNRDDVQRGAVDACVTWLLENEFIQAAEPSDGTGGKVYHPTHL---- 613
Query: 427 IAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEYRIPSDGILLSRSKV 486
A + + LS L I++DL F L N LH+++LV P + D + +
Sbjct: 614 -GSATLSSSLSPTDTLDIFADLQRAMKGFVLENDLHIVYLVTP----VFEDWTSIDWYRF 668
Query: 487 YDRYTKFHPQTLRVAEALGVTENLVALNVTGKL--KDEKK----ALLCRFFHACILYDVL 540
+ + K RVAE +GV E +A V GK+ + E++ A+ RFF + +L D++
Sbjct: 669 FCLWEKLPTSMKRVAELVGVEEGFLARCVKGKVVARTERQHRQMAIHKRFFTSLVLLDLI 728
Query: 541 NFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELWCYKQ-LLTDLPQTLMY 599
+ +++ + YG +Q+ + +A + F L W + LL+ + L +
Sbjct: 729 SEIPLKEINQKYGCNRGQIQSLQQSAAVYAGMITVFSNRLG--WHNMELLLSQFQKRLTF 786
Query: 600 CRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIARADAKEMVAKIRH-LPLRSARNLI 657
L L+ + + RAR L +G+ ++ +ARAD E+ A ++ LP +SAR +
Sbjct: 787 GIQRELCDLIRVSSLNAQRARFLYASGFLTVADLARADTVEVEAALKDALPFKSARKAV 845
>gi|449275810|gb|EMC84578.1| Helicase POLQ-like protein, partial [Columba livia]
Length = 888
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 201/718 (27%), Positives = 342/718 (47%), Gaps = 89/718 (12%)
Query: 13 AEEFKFYLE--------EYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRID 64
A+E K YL+ G G PT R + + +CTIEK + LI LI+EN++D
Sbjct: 98 AKEKKCYLQALFQEVDVRVEGYMGSMVPTGR-FSALDVAVCTIEKANGLINRLIEENKMD 156
Query: 65 EIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKK---------------SIQIFAMSATI 109
+G++V+DE HML + RG +LE +++KV Y+ + IQI MSAT+
Sbjct: 157 SLGVVVVDELHMLGDSHRGYLLELLLTKVRYVTEKVAKRQAKMTSPSFGGIQIIGMSATL 216
Query: 110 GNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGP 169
N+ L+++++ Y + RP E+V + ++ S S+ + L G
Sbjct: 217 PNLGLLASWLDAELYCTDFRPVPLKEWVKIGSNIYDS----SMNLVREFQPKLQLKGD-E 271
Query: 170 DAVLHLVQGNLM----VLIFCSSKIACSNLA--LRLQFDRFPGTKE-------------- 209
D V+ L + VL+FC SK C LA + +F ++E
Sbjct: 272 DHVVSLCYETVCEGHSVLLFCPSKNWCEKLADIIAREFYSLQQSEECFISQGSSKNSALA 331
Query: 210 ---YKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTL 266
++ +++++ LK G L + L+ + +GVA+HHA LT ER +IE A+ G +
Sbjct: 332 PVVVDREGIDEVLDQLKRSISG-LDSVLQRTLPWGVAFHHAGLTFDERDIIEGAFRQGLI 390
Query: 267 QIICCTSTLAAGVNLPAQRVIIRDSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCK 326
+++ TSTL++GVNLPA+RVIIR + + YKQM GRAGR G+ GESI++CK
Sbjct: 391 RVLAATSTLSSGVNLPARRVIIRTPMFCGKLLDMLTYKQMAGRAGRKGVDTEGESILVCK 450
Query: 327 TMQDFLRFSSMMNAGPEPISSHM-------DPPTLVDLILEVVAANLCSSLEDVKTLIKH 379
+ + ++++ +P+ S + ++ ILE++ + ++ +DV+T
Sbjct: 451 PSERS-KGTTLLQGSLKPVCSCLLRREGEGVASSMKRAILEIIVGGVANTPDDVQTYASC 509
Query: 380 TLFY-QLKSP----EDQQTFLETTLSEIVASLLASKGTMLTMNEAGHLSL-----TSIAK 429
TL LK+ E Q +T E + L + ++ + T +
Sbjct: 510 TLLASSLKASKCGNERTQDKAQTGPIEACVTWLLENEFIQVLDSGNDMKAKVYHPTHLGS 569
Query: 430 AAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEYRIPSDGILLSRSKVYDR 489
A + + LS + I++DL +F L N LH+++LV P + + + + +
Sbjct: 570 ATLSSSLSPTEAMEIFADLQRAMKSFVLENDLHIVYLVTP----VYEEWTTIDWYQFFCL 625
Query: 490 YTKFHPQTLRVAEALGVTENLVALNVTGKL--KDEKK----ALLCRFFHACILYDVLNFD 543
+ K RVAE +G+ E +A +V GK+ K EK+ A+ RFF + L D+++
Sbjct: 626 WEKLPASMRRVAELVGIEEGFLARSVKGKIIAKTEKQHRQMAIHKRFFTSLALLDLISEV 685
Query: 544 NHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELWCYKQLLTDLPQTLMYCRAP 603
+ + K YG LQ+ + +A V FC L W +LL Q+ +
Sbjct: 686 PLKDMTKKYGCSRGQLQSLQQSAATYAGMVTVFCNRLG--WHNMELLLSQFQSRLTFGVH 743
Query: 604 NLRALMDLPGVKI---GRARQLLNAGYSSLELIARADAKEMVAKIRH-LPLRSARNLI 657
R L DL V + RAR L NAG+ ++ +A+A ++ +++ +P +S R +
Sbjct: 744 --RELCDLVRVSLLNAQRARMLYNAGFVTVADLAKASPDDVATALKNSVPFKSVRKAV 799
>gi|357436569|ref|XP_003588560.1| DNA polymerase I family protein expressed [Medicago truncatula]
gi|355477608|gb|AES58811.1| DNA polymerase I family protein expressed [Medicago truncatula]
Length = 2269
Score = 243 bits (620), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 211/738 (28%), Positives = 316/738 (42%), Gaps = 121/738 (16%)
Query: 4 EKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRI 63
EK + L K E ++ Y G +G K S+ +CTIEK + LI L++E R+
Sbjct: 594 EKAEHLEKLLEPLGKHVRSYYGNQGGGSLPK----DTSVAVCTIEKANSLINRLLEEGRL 649
Query: 64 DEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLK-----------------------KSI 100
E+G+IVIDE HM+ +P+RG +LE +++K+ Y + +
Sbjct: 650 SEMGIIVIDELHMVGDPKRGYLLELMLTKLRYAAGEGISKSSDGEGSGGSSDKNDPAQGL 709
Query: 101 QIFAMSATIGNINALSTFIEGI------------------TYVENSRPTKHSEYVTVDKR 142
QI MSAT+ N+ A++ +++ I Y RP EY+ V
Sbjct: 710 QIVGMSATMPNVAAVADWLQSIFSLQVLINLSVPNCIKAALYQTEFRPVPLEEYIKVGNS 769
Query: 143 VFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHL----VQGNLMVLIFCSSKIACSNLALR 198
++ L+ D L G PD V+ L VQ VLIFCSS+ C + A
Sbjct: 770 IYNK--SMELSRTIPKGAD--LGGKDPDHVVELCNEVVQEGQSVLIFCSSRKGCESTARH 825
Query: 199 LQ--FDRFPGTKEYKKQEKEDLIEALK--EENDGKLSTNLEECILYGVAYHHADLTAGER 254
+ F E D+ A+ + L LEE GVA+HHA LT ER
Sbjct: 826 VAKFLKSFTVDINENNCEFADITSAINSLRKCPAGLDPVLEETFPAGVAFHHAGLTVEER 885
Query: 255 RLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGRDFISLNMYKQMVGRAGRTG 314
++E Y G L+++ TSTLAAGVNLPA+RVI R +G DFI Y QM GRAGRTG
Sbjct: 886 EIVETCYRKGLLRVLTATSTLAAGVNLPARRVIFRQPRIGCDFIDGTRYMQMAGRAGRTG 945
Query: 315 LQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHM--DPPTLVDLILEVVAANLCSSLED 372
+ GES+++CK Q+ + ++N P+ S + D + ILEVVA + + D
Sbjct: 946 IDTKGESVLICKP-QELKKVMGLLNESCPPLHSCLSEDLNGMTHAILEVVAGGIVQTAND 1004
Query: 373 VKTLIKHTLFYQLKSPEDQQTFLETTLSEIVASLLASKGTMLTMNEAGHL-SLTSIAKAA 431
+ ++ TL K FL+ S + + L NE L S T + +A+
Sbjct: 1005 IHRYVRCTLLNSTK------PFLDVVKSAQESLRWLCQRKFLEWNEDTKLYSTTPLGRAS 1058
Query: 432 VQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEYRIPSDGILLSRSKVYDRYT 491
+ L + LI+ +DL + F L + LH+++LV P+ + D Y+R+
Sbjct: 1059 FGSSLCPEESLIVLADLSRAREGFVLASDLHLVYLVTPINVDVEPDW-----ESYYERFV 1113
Query: 492 K---------------FHPQTL-----RVAEALGVTENLVALNVTGKL------------ 519
K F P L V +GVTE + G
Sbjct: 1114 KLSPLDQVKINFPVLVFQPTMLLDLLRSVGNRVGVTEPFLMRMAHGVPMGSNKSRWSNNK 1173
Query: 520 -------------KDEKKALLC-RFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNV 565
D++ +C RF+ A IL ++ +V + + + +Q
Sbjct: 1174 RQNQHGMSSGIVNSDDQTLRVCKRFYVALILSLLVQETPVGEVCEAFKVARGMVQGLQEN 1233
Query: 566 TSYFASKVYRFCEELPELWC-YKQLLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLN 624
FAS V FCE L W ++ L+ + + + L +P VK RAR L
Sbjct: 1234 AGRFASMVAVFCERLG--WHDFEGLVAKFQNRVSFGVRAEVVELTTIPYVKGSRARALYK 1291
Query: 625 AGYSSLELIARADAKEMV 642
AG + IA A E+V
Sbjct: 1292 AGLRTPLAIAEASIPELV 1309
>gi|325092933|gb|EGC46243.1| DNA-directed DNA polymerase theta [Ajellomyces capsulatus H88]
Length = 934
Score = 242 bits (618), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 185/642 (28%), Positives = 313/642 (48%), Gaps = 46/642 (7%)
Query: 33 TKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSK 92
T+ I +CTIEK + L+ + I+E I+++G++V+DE HML++ RG ++E +V+K
Sbjct: 259 TRATWTDTDIAVCTIEKANSLVNAAIEECSINDLGVVVLDELHMLDDEHRGYLIEIMVTK 318
Query: 93 VLYLKKSIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSFDGKSL 152
+L L++ IQI MSAT+ N L+ ++ Y+ RP E++ + ++ + K
Sbjct: 319 LLLLQQDIQIVGMSATLSNTEVLAKWLHANYYISKYRPILIQEHLVYNNAIYPATSSKEF 378
Query: 153 --TEIYADNLD----YSLTGSGPDAVLHLVQGN----LMV-------------LIFCSSK 189
T + + D YSL D +H GN MV L+FC +
Sbjct: 379 FRTAMQLNKPDSSPNYSLACRIIDRSMHKELGNPTANAMVSLALETALSGYGALVFCGGR 438
Query: 190 IACSNLALRLQFDRFPGTKEYKK---QEKEDLIEALKEENDGKLSTNLEECILYGVAYHH 246
AC + A+ L P + + DLI L+ G L L+ ++ GVA+HH
Sbjct: 439 QACQSNAV-LVSHAMPDETALDNDLLERRMDLIAGLQSLPCG-LDPVLQMTVIKGVAFHH 496
Query: 247 ADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGRDFISLNMYKQM 306
A LT ER LI EAY GTL+++ T +LAAG+NLPA+RVI+ + +GRD + M +QM
Sbjct: 497 AGLTTEERDLIAEAYDKGTLRVLIATCSLAAGINLPARRVILCGARMGRDLVGPAMLRQM 556
Query: 307 VGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPT--LVDLILEVVAA 364
GRAGR G E GE+ + C+ D + ++ A I+S + P + +LE +A
Sbjct: 557 RGRAGRKGKDEVGETYLCCQK-DDLEAVAELLEAEMPAIASGLTPEKRGIKRALLEAIAT 615
Query: 365 NLCSSLEDVKTLIKHTLFYQLKSPEDQQTFLETTLSEIVASLLASKGTMLTMNEAGHLSL 424
L SS E + + TL YQ + + ++ TL ++V ++ + +A
Sbjct: 616 RLVSSRESINEYVMCTLLYQNMEAAELFSMVDKTLEDLV------DNGLVDLEQAESYEP 669
Query: 425 TSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEYRIPSDGILLSRS 484
T + +A V + LS + + I+ +L +F + +H+ ++ PL+ P+D + S
Sbjct: 670 TRLGQAVVSSSLSPEDGIFIHDELKRALKSFVMDGEMHIFYMFAPLQNSSPTD---IDWS 726
Query: 485 KVYDRYTKFHPQTLRVAEALGVTENLV-ALNVTG-KLKDEKKA-LLCRFFHACILYDVLN 541
D+ +R + +GV V + +G ++KDE A + R + A L D+ N
Sbjct: 727 IFRDQMNNLDESGIRALQFVGVEPAFVNKMAQSGTRIKDETIARIYQRAYTAFQLRDLSN 786
Query: 542 FDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELWCYKQLLTDLPQTLMYCR 601
+A+ Y I ++Q FA+ + +FC+ + W ++ D + ++
Sbjct: 787 EVPISTIAQRYNIPRGNVQTLAQTCHGFAAGIVKFCQRMG--WDMLAVVLDHMRDRLHAG 844
Query: 602 A-PNLRALMDLPGVKIGRARQLLNAGYSSLELIARADAKEMV 642
A +L + + VK AR L G+ SL +A AD K++V
Sbjct: 845 ARADLLEMAQVAYVKSRTARLLWENGFKSLRALAEADPKDLV 886
>gi|195053948|ref|XP_001993888.1| GH22128 [Drosophila grimshawi]
gi|193895758|gb|EDV94624.1| GH22128 [Drosophila grimshawi]
Length = 2218
Score = 242 bits (618), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 192/635 (30%), Positives = 316/635 (49%), Gaps = 48/635 (7%)
Query: 42 IYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKK--- 98
+ ICTIEK + ++ L+++ ++DEIG +V+DE H++++ RG ILE +++KVLY+ +
Sbjct: 409 VAICTIEKANSIVNKLLEQGKLDEIGTVVVDEVHLISDAGRGYILELLLAKVLYMSRKHG 468
Query: 99 -SIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYA 157
IQI MSAT+ N+ L ++ Y+ + RP E + V +++ + + L I +
Sbjct: 469 LQIQIITMSATLANVQLLQQWLNAELYITDYRPVALQEMIKVGNKIYDN-QLRFLRNISS 527
Query: 158 DNLDYSLTGSGPDAVLHLVQGNLM----VLIFCSSKIACSNLALRLQF-------DRFPG 206
+ + G+ D V L L+ V++FC SK C NLA++L
Sbjct: 528 SS-EVPPLGNDADHVAQLCIETLLEGCSVVVFCPSKDWCENLAVQLATAMHALIKSDSKL 586
Query: 207 TKEYKKQEKEDLIEALKEE-ND--GKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLA 263
K + Q + IE +K++ D L + + I YG A+HHA LT ER ++E ++ A
Sbjct: 587 AKRLRSQLNTESIEVVKQQLRDIPTGLDAIMSKAITYGCAFHHAGLTTEERDIVEASFKA 646
Query: 264 GTLQIICCTSTLAAGVNLPAQRVIIRDSYVGRDFISLNMYKQMVGRAGRTGLQESGESIM 323
G L++I TSTL++GVNLPA+RV+IR G +S Y+QM+GRAGRTG GESI+
Sbjct: 647 GALKVIVATSTLSSGVNLPARRVLIRSPLFGGKQMSSLTYRQMIGRAGRTGKDTLGESIL 706
Query: 324 LCKTMQDFLRFSSMMNAGPEPISSHMD---PPTLVDLILEVVAANLCSSLEDVKTLIKHT 380
+C T + ++ A +PI S +D L +LEV+++ + SS +DV + T
Sbjct: 707 IC-TESNARIGRELVTAQLKPIRSCLDLDGSTHLKRALLEVISSGVASSKKDVDSFFNCT 765
Query: 381 LFYQLKSPEDQQTFLETT----------LSEIVASLLASKGTMLTMNE---AGHLSLTSI 427
L K+ Q +++ + L+ + L +E H T +
Sbjct: 766 LLSVQKTLNPQVEKETEDEDKDEDEAHYITDALDFLVEYEFIRLQTDEETDTEHYVATRL 825
Query: 428 AKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLE--YRIPSDGILLSRSK 485
A + + + LI++++L ++ F L + LH ++LV P Y++ LL
Sbjct: 826 GAACLASSMPPTDGLILFAELQKSRRCFVLESELHAVYLVTPYSVCYQLQDVDWLL---- 881
Query: 486 VYDRYTKFHPQTLRVAEALGVTENLVALNVTGKLKDEKKALLC--RFFHACILYDVLNFD 543
D + K +P +V E +GV E + + G+ K + K + RF+ A L +++N
Sbjct: 882 YLDMWEKLNPAMKKVGELIGVKEAFLVRAMRGQTKLDYKLMQIHKRFYTALALQELVNET 941
Query: 544 NHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELWCYKQL-LTDLPQTLMYCRA 602
VA + Q LQ+ + S FA V FC L W L ++ L +
Sbjct: 942 PINVVAHKFKCQRGMLQSLQQMASTFAGIVTAFCNSLQ--WSTLALVVSQFKDRLYFGIH 999
Query: 603 PNLRALMDLPGVKIGRARQLLNAGYSSLELIARAD 637
+L LM LP + RAR L +AG +SL +A A+
Sbjct: 1000 RDLIDLMRLPDLTHKRARLLHDAGITSLVELAGAN 1034
>gi|240279802|gb|EER43307.1| DNA polymerase I [Ajellomyces capsulatus H143]
Length = 941
Score = 242 bits (617), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 185/642 (28%), Positives = 313/642 (48%), Gaps = 46/642 (7%)
Query: 33 TKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSK 92
T+ I +CTIEK + L+ + I+E I+++G++V+DE HML++ RG ++E +V+K
Sbjct: 269 TRATWTDTDIAVCTIEKANSLVNAAIEECSINDLGVVVLDELHMLDDEHRGYLIEIMVTK 328
Query: 93 VLYLKKSIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSFDGKSL 152
+L L++ IQI MSAT+ N L+ ++ Y+ RP E++ + ++ + K
Sbjct: 329 LLLLQQDIQIVGMSATLSNTEVLAKWLHANYYISKYRPILIQEHLVYNNAIYPATSSKEF 388
Query: 153 --TEIYADNLD----YSLTGSGPDAVLHLVQGN----LMV-------------LIFCSSK 189
T + + D YSL D +H GN MV L+FC +
Sbjct: 389 FRTAMQLNKPDSSPNYSLACRIIDRSMHKELGNPTANAMVSLALETALSGYGALVFCGGR 448
Query: 190 IACSNLALRLQFDRFPGTKEYKK---QEKEDLIEALKEENDGKLSTNLEECILYGVAYHH 246
AC + A+ L P + + DLI L+ G L L+ ++ GVA+HH
Sbjct: 449 QACQSNAV-LVSHAMPDETALDNDLLERRMDLIAGLQSLPCG-LDPVLQMTVIKGVAFHH 506
Query: 247 ADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGRDFISLNMYKQM 306
A LT ER LI EAY GTL+++ T +LAAG+NLPA+RVI+ + +GRD + M +QM
Sbjct: 507 AGLTTEERDLIAEAYDKGTLRVLIATCSLAAGINLPARRVILCGARMGRDLVGPAMLRQM 566
Query: 307 VGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPT--LVDLILEVVAA 364
GRAGR G E GE+ + C+ D + ++ A I+S + P + +LE +A
Sbjct: 567 RGRAGRKGKDEVGETYLCCQK-DDLEAVAELLEAEMPAIASGLTPEKRGIKRALLEAIAT 625
Query: 365 NLCSSLEDVKTLIKHTLFYQLKSPEDQQTFLETTLSEIVASLLASKGTMLTMNEAGHLSL 424
L SS E + + TL YQ + + ++ TL ++V ++ + +A
Sbjct: 626 RLVSSRESINEYVMCTLLYQNMEAAELFSMVDKTLEDLV------DNGLVDLEQAESYEP 679
Query: 425 TSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEYRIPSDGILLSRS 484
T + +A V + LS + + I+ +L +F + +H+ ++ PL+ P+D + S
Sbjct: 680 TRLGQAVVSSSLSPEDGIFIHDELKRALKSFVMDGEMHIFYMFAPLQNSSPTD---IDWS 736
Query: 485 KVYDRYTKFHPQTLRVAEALGVTENLV-ALNVTG-KLKDEKKA-LLCRFFHACILYDVLN 541
D+ +R + +GV V + +G ++KDE A + R + A L D+ N
Sbjct: 737 IFRDQMNNLDESGIRALQFVGVEPAFVNKMAQSGTRIKDETIARIYQRAYTAFQLRDLSN 796
Query: 542 FDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELWCYKQLLTDLPQTLMYCR 601
+A+ Y I ++Q FA+ + +FC+ + W ++ D + ++
Sbjct: 797 EVPISTIAQRYNIPRGNVQTLAQTCHGFAAGIVKFCQRMG--WDMLAVVLDHMRDRLHAG 854
Query: 602 A-PNLRALMDLPGVKIGRARQLLNAGYSSLELIARADAKEMV 642
A +L + + VK AR L G+ SL +A AD K++V
Sbjct: 855 ARADLLEMAQVAYVKSRTARLLWENGFKSLRALAEADPKDLV 896
>gi|328724318|ref|XP_003248103.1| PREDICTED: DNA polymerase theta-like isoform 1 [Acyrthosiphon
pisum]
Length = 1691
Score = 242 bits (617), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 199/663 (30%), Positives = 322/663 (48%), Gaps = 61/663 (9%)
Query: 14 EEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDE 73
E F+ + AG G Y PT L ++ I TIEK + +I LI+E+ + ++G IV+DE
Sbjct: 96 ELFEGTNKRVAGFMGSYTPTG-GLRSVNVAIATIEKANGIINRLIEEDGLQDVGCIVVDE 154
Query: 74 FHMLNEPQRGPILECVVSKVLYLKK-----SIQIFAMSATIGNINALSTFIEGITYVENS 128
HML + RG +LE +++K+ Y+ K SIQI MSAT+ N++ L+ +++ Y +
Sbjct: 155 LHMLGDSNRGYLLELLLTKIKYMSKIRSNLSIQIVGMSATLPNLDILAKWLDATLYHTDY 214
Query: 129 RPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLT-------GSGPDAVLHLVQGNLM 181
RP EY+ + K+V+ A+NL S T + PD V +L ++
Sbjct: 215 RPVPLKEYLKIGKKVYN-----------ANNLSLSHTIEPSVVIKNDPDDVKYLCIDTIL 263
Query: 182 ----VLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGK-------- 229
+LIFC +K C +LAL + + + K + DL L E+ G
Sbjct: 264 QGYSILIFCFTKKWCESLALEIASEIKHLGGDNKSKVGNDLRNQLNGESLGDVLEQLRRC 323
Query: 230 ---LSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRV 286
L T+L + I +GVA+HHA LT ER +IE A+ ++++ TSTL++GVNLPA+RV
Sbjct: 324 PVGLETDLSKTISFGVAFHHAGLTMDERDIIEGAFKQNIVRVLIATSTLSSGVNLPARRV 383
Query: 287 IIRDSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPIS 346
I+R + I + Y+QM+GRAGR G+ +GES ++C + + P PI
Sbjct: 384 IVRSPHCHGFPIDILQYRQMIGRAGRMGVDTAGESYLICNENERRMGEEIATQNLP-PIK 442
Query: 347 SHMD----PPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQLKSPEDQQTFLETTLSEI 402
S + L +LEVVA + + E+ IK TL Y S + ET ++E
Sbjct: 443 SCLGVGDFSSCLKRALLEVVAGCVVCTTEEAFEYIKCTLLYISNS----ENLNETPINEC 498
Query: 403 VASLLASKGTMLTMNEAGHLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLH 462
+ L+ + LS T++ +A + A ++ ++ L + +L + NF L + LH
Sbjct: 499 LKLLIEHQ---FVRENDNKLSPTNLGQACLAASVTPEIGLKLIKELDRARQNFVLDSELH 555
Query: 463 MLFLVIPLEYRIPSDGILLSRSKVYDRYTKFHPQTLRVAEALGVTENLVALNVTG----- 517
+L+L+ P Y + L +V + K +V + +G+ E + +TG
Sbjct: 556 LLYLITP--YSVSDQIGHLDWFRVLHVWEKLPHSMRKVGDMIGIEEGFIVKAMTGTSFST 613
Query: 518 KLKDEKKALLCRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFC 577
K A+ RF+ +L+D++N V YG LQ+ +S FA V +FC
Sbjct: 614 SSDKHKLAVHRRFYTTLLLHDLINEIPINTVVLKYGTSKGLLQSLQQSSSTFAGMVTQFC 673
Query: 578 EELPELWCYKQLL-TDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIARA 636
+ L W +LL + + L + L L+ L + AR L NAG ++ +A A
Sbjct: 674 KRLG--WSSLELLISQFSERLQFGVQRQLVELLRLDCLNSITARTLYNAGIQNIPELALA 731
Query: 637 DAK 639
D +
Sbjct: 732 DLR 734
>gi|195450899|ref|XP_002072681.1| GK13557 [Drosophila willistoni]
gi|194168766|gb|EDW83667.1| GK13557 [Drosophila willistoni]
Length = 2080
Score = 241 bits (615), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 193/662 (29%), Positives = 324/662 (48%), Gaps = 67/662 (10%)
Query: 25 GVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGP 84
G G Y P + ++ ICTIEK + ++ L+++ ++D IG +V+DE H++++P RG
Sbjct: 314 GFFGGYTPPG-GFDALNVAICTIEKANAIVNKLLEQGKLDVIGTVVVDEIHLISDPGRGY 372
Query: 85 ILECVVSKVLYLKK----SIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVD 140
ILE +++K+LY+ + IQ+ MSAT+ N+ L +++ Y+ N RP E + V
Sbjct: 373 ILELLLAKILYMSRKHALQIQVITMSATLANVELLQSWLNAELYITNYRPVALQEMIKVG 432
Query: 141 KRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLM----VLIFCSSKIACSNLA 196
+++ + + + L +I + + G+ D V L L+ V++FC SK C NLA
Sbjct: 433 TQIYDN-NLRVLRDITQKSA-VPMLGNDCDHVAQLCIETLLEGCSVIVFCPSKDWCENLA 490
Query: 197 LRL------------------QFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECI 238
++L + P + E KQ+ D+ L D +S + I
Sbjct: 491 VQLATAIHTLIKSGSEVGQNLRTHLNPASIEEVKQQLRDIPTGL----DAVMS----KAI 542
Query: 239 LYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGRDFI 298
Y A+HHA LT ER ++E ++ G ++++ TSTL++GVNLPA+RV+IR G +
Sbjct: 543 TYACAFHHAGLTTEERDIVEASFKGGAIKVLVATSTLSSGVNLPARRVLIRSPLFGGKQM 602
Query: 299 SLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISS--HMDPPT-LV 355
S Y+QM+GRAGRTG GESI++C + ++ A +PI+S MD T L
Sbjct: 603 SSLTYRQMIGRAGRTGRDTLGESILICNESNARIG-KDLVTAQLKPITSCLEMDGSTHLK 661
Query: 356 DLILEVVAANLCSSLEDVKTLIKHTLFY---QLKSPEDQQTFLETT---------LSEIV 403
+LEV+++ + S+ E++ + TL +L +P E +S+ +
Sbjct: 662 RALLEVISSGVASTKENINDFVNCTLLSAQKKLATPPTTTEKDEEEGDGEKWTDYISDAL 721
Query: 404 ASLLASKGTMLTMNEAGHLS---LTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNS 460
L+ + L +E S T + A + + + LI++++L ++ F L +
Sbjct: 722 DFLMEYEFVRLQTDEEAETSNYVATRLGAACLASSMPPTDGLILFAELQKSRRCFVLESE 781
Query: 461 LHMLFLVIPLE--YRIPSDGILLSRSKVYDRYTKFHPQTLRVAEALGVTENLVALNVTGK 518
LH ++LV P Y++ LL D + K P +V E +GV E + + G+
Sbjct: 782 LHAVYLVTPYSVCYQLQDLDWLL----YLDMWEKLSPAMKKVGELIGVKEAFLVRAMRGQ 837
Query: 519 LKDEKKALLC--RFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRF 576
K + K + RF+ A L +++N VA + Q LQ + S FA V F
Sbjct: 838 TKLDYKQMQIHKRFYTALALQELVNETPINVVAHKFKCQRGMLQGLQQMASTFAGIVTAF 897
Query: 577 CEELPELWCYKQL-LTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIAR 635
C L W L ++ L + +L LM LP + RAR L +AG+++L +A
Sbjct: 898 CNSLQ--WSTLALVVSQFKDRLFFGIHRDLIDLMRLPDLTHKRARALHDAGFTNLLELAG 955
Query: 636 AD 637
AD
Sbjct: 956 AD 957
>gi|195399626|ref|XP_002058420.1| GJ14321 [Drosophila virilis]
gi|194141980|gb|EDW58388.1| GJ14321 [Drosophila virilis]
Length = 2086
Score = 241 bits (614), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 183/630 (29%), Positives = 317/630 (50%), Gaps = 44/630 (6%)
Query: 42 IYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKK--- 98
+ ICTIEK + ++ L+++ ++DE+G +++DE H++++P RG ILE +++K+LY+ +
Sbjct: 361 VAICTIEKANSIVNKLLEQAKLDELGTVIVDEVHLISDPGRGYILELLLAKILYMSRRQA 420
Query: 99 -SIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYA 157
IQ+ MSAT+ N+ L ++ YV + RP E + V +++ + + L ++ +
Sbjct: 421 LQIQVITMSATLANVELLQRWLSAELYVTDYRPVALQEMIKVGTKIYDN-QLRFLRDV-S 478
Query: 158 DNLDYSLTGSGPDAVLHLVQGNLM----VLIFCSSKIACSNLALRL--------QFDRFP 205
N + + D V L L+ V++FC SK C NLA++L + D
Sbjct: 479 RNAELPGLANDSDQVAQLCIETLLEGCSVVVFCPSKDWCENLAVQLATAMHALIKSDSQL 538
Query: 206 GTK---EYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYL 262
K + ++ +D+ L++ G L + + + I Y A+HHA LT ER ++E ++
Sbjct: 539 AQKLRGQLNREALDDVKRQLRDIPTG-LDSVMSKAISYACAFHHAGLTTEERDIVEASFK 597
Query: 263 AGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGRDFISLNMYKQMVGRAGRTGLQESGESI 322
AG L++I TSTL++GVNLPA+RV+IR G +S Y+QM+GRAGRTG GESI
Sbjct: 598 AGALKVIVATSTLSSGVNLPARRVLIRSPLFGGKPMSSLTYRQMIGRAGRTGRDTLGESI 657
Query: 323 MLCKTMQDFLRFSSMMNAGPEPISSHMD---PPTLVDLILEVVAANLCSSLEDVKTLIKH 379
++C + ++ A +PI S +D L +LEV+++ + S+ +D+ +
Sbjct: 658 LICSESNARI-GRELVTAQLKPIRSCLDLDGSTHLKRALLEVISSGVASTRQDIDSFFNC 716
Query: 380 TLFYQLKSPEDQQTF----LETTLSEIVASLLASKGTMLTMNEAGHLS---LTSIAKAAV 432
TL E ++ ++ +S+ + L+ + L +E T + A +
Sbjct: 717 TLLSAQSRGEQEEEHDPEAVDHYISDALDFLIEYEFIRLQTDEEAETENYMATRLGAACL 776
Query: 433 QAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLE--YRIPSDGILLSRSKVYDRY 490
+ + LI++++L ++ F L + LH ++LV P Y++ LL D +
Sbjct: 777 ASSMPPTDGLILFAELQKSRRCFVLESELHAVYLVTPYSVCYQLQEVDWLL----YLDMW 832
Query: 491 TKFHPQTLRVAEALGVTENLVALNVTGKLKDEKKALLC--RFFHACILYDVLNFDNHQKV 548
K P +V E +GV E + + G+ K + K + RF+ A L +++N V
Sbjct: 833 EKLSPAMKKVGELVGVKEAFLVRAMRGQAKLDYKLMQIHKRFYTALALQELVNETPINVV 892
Query: 549 AKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELWCYKQL-LTDLPQTLMYCRAPNLRA 607
A + Q LQ + S FA V FC L W L ++ L + +L
Sbjct: 893 AHKFKCQRGMLQGLQQMASTFAGIVTAFCNSLQ--WSTLSLVVSQFKDRLYFGIHRDLID 950
Query: 608 LMDLPGVKIGRARQLLNAGYSSLELIARAD 637
LM LP + RAR L +AG +SL +A A+
Sbjct: 951 LMRLPDLSHKRARALHDAGITSLVELAGAN 980
>gi|326677806|ref|XP_694437.5| PREDICTED: DNA polymerase theta [Danio rerio]
Length = 2593
Score = 241 bits (614), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 195/684 (28%), Positives = 327/684 (47%), Gaps = 81/684 (11%)
Query: 42 IYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKK--- 98
+ +CTIEK + L+ LI+E+++D +G +V+DE HM+ + RG +LE +++K+ Y+ +
Sbjct: 401 VAVCTIEKANGLVNRLIEEDKLDLLGTVVVDELHMVGDSGRGYLLELLLTKIRYIAQKTA 460
Query: 99 ----------SIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSFD 148
+QI MSAT+ N++ L+ ++ Y N RP E+V + ++ D
Sbjct: 461 TRNSGQSTSTGVQIIGMSATLPNLDLLARWLSAELYSTNYRPVPLMEWVKIGTNIY---D 517
Query: 149 GKSLTEIYADNLDYSLTGSGPDAVLHL----VQGNLMVLIFCSSKIACSNLALRLQFDRF 204
G SL + + G D ++ L VQ L+FC SK C LA +
Sbjct: 518 G-SLNLVRQFTPALPIKGDD-DHIVSLCFETVQDGHSALLFCPSKNWCEKLADSI----- 570
Query: 205 PGTKEYKKQEKE------------------DLIEALKEENDGKLSTNLEECILYGVAYHH 246
G + Y KE D++ LK G L L+ + +GVA+HH
Sbjct: 571 -GREFYNLHHKEMQSGSGGQSISLNQEGLLDVLAQLKRTPAG-LDHVLQRTVPWGVAFHH 628
Query: 247 ADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGRDFISLNMYKQM 306
A LT ER ++E A+ G ++++ TSTL++GVNLPA+RVIIR + + YKQM
Sbjct: 629 AGLTFDERDILEGAFRQGYIRVLAATSTLSSGVNLPARRVIIRTPVFNGHLLDILTYKQM 688
Query: 307 VGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDP-------PTLVDLIL 359
VGRAGR G+ GES+++CK + + S++ +PISS + +++ IL
Sbjct: 689 VGRAGRKGVDTIGESVLVCKEAER-AKGMSLIQGSLKPISSCLVKREGEGVTTSMLRAIL 747
Query: 360 EVVAANLCSSLEDVKTLIKHTLF-YQLKSPEDQQTFLET------TLSEIVASLLASKGT 412
E++ + SS +DV+ TL + + E Q E+ + + L+ ++
Sbjct: 748 EIIVGGVASSPQDVRMYAACTLLAASIAAEEVHQDGSESEARNKGAIEACIEWLMDNEFI 807
Query: 413 MLTMNEAGHLS-----LTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLV 467
+ G + T + A + + LS L I++DL F L N LH+L+ +
Sbjct: 808 HIQKEGDGKMPKDKYCPTHLGSATLSSSLSPPEALGIFADLQRAMKGFVLENDLHILYQI 867
Query: 468 IPLEYRIPSDGILLSRSKVYDRYTKFHPQTLRVAEALGVTENLVALNVTGKL--KDEKK- 524
P+ D + + + + + RVAE +G+ E +A +V GKL K EK+
Sbjct: 868 TPVYV----DWTTIDWYQFFCLWEQLPSAMKRVAEMVGIQEGFLARSVGGKLIAKTEKQR 923
Query: 525 ---ALLCRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELP 581
A+ RFF +L D+++ + VAK YG LQ+ S +A V FC L
Sbjct: 924 RQMAIHKRFFTTLVLLDLVSEEPLGAVAKKYGCSRGQLQSLQQSASTYAGMVTVFCNRLG 983
Query: 582 ELW-CYKQLLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIARADAKE 640
W + LL+ L + L L+ + + RAR L ++G+ ++ +ARAD E
Sbjct: 984 --WHNLELLLSQFQSRLSFGVQRELCDLVRISLLTAQRARTLYSSGFVTVAELARADVTE 1041
Query: 641 MVAKIRH-LPLRSARNLISAAKLH 663
+ +R +P +S+R + +++
Sbjct: 1042 VEKALRKAIPFKSSRQAVDESEVE 1065
>gi|393906987|gb|EJD74472.1| type III restriction enzyme [Loa loa]
Length = 516
Score = 240 bits (613), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 145/368 (39%), Positives = 216/368 (58%), Gaps = 9/368 (2%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+ EK SL+ ++ +EEYA KG+ PP KR+ +SIY+ TIEK + LI SLI+
Sbjct: 140 IAQEKVYSLSVFEDKLNVCVEEYAASKGRLPPIKRR-KGESIYVATIEKANMLINSLIEL 198
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIE 120
+RIDEIG++V+DE HM+ E RG I+E + K + K + QI +SAT+ N+ LS F+
Sbjct: 199 DRIDEIGVVVVDELHMIGENTRGAIIEQGLIKFMQ-KGTGQIIGLSATLSNVEQLSKFLS 257
Query: 121 GITYVENSRPTKHSEYVTVDKRVF-QSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGN 179
+ RP K E V +D ++ +GK E+ + L PD ++ L++
Sbjct: 258 AAVFSTKFRPIKLVEKVKIDNSLYIVQPEGKLEFEMCLG--ENKLRNRDPDGLVPLLRDI 315
Query: 180 L---MVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEE 236
+ VLIFC +K C ++ + +E KK E+ ++ALK E DGK S+ LE
Sbjct: 316 VPKQSVLIFCPTKQNCESVCKAVSHLMPKNVRERKKTERLAAVKALKSEEDGKFSSLLEL 375
Query: 237 CILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGRD 296
I+ GVAYHH+ LTA ER++IE A+ G + IICCTSTLAAGVNLPA+RVII+ VG++
Sbjct: 376 SIMRGVAYHHSGLTADERKIIEGAFQDGIINIICCTSTLAAGVNLPARRVIIKAPLVGKE 435
Query: 297 FISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAG-PEPISSHMDPPTLV 355
I Y QM+GRAGR G + GE++ + + + +F M++ PE SS +P
Sbjct: 436 PIRKAQYLQMIGRAGRAGYDDIGEAVTIVHSGYEESKFLDMISGPLPECNSSLNEPVMFS 495
Query: 356 DLILEVVA 363
+L++++
Sbjct: 496 SFLLDLIS 503
>gi|345796069|ref|XP_545125.3| PREDICTED: LOW QUALITY PROTEIN: DNA polymerase theta [Canis lupus
familiaris]
Length = 2596
Score = 240 bits (613), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 201/710 (28%), Positives = 341/710 (48%), Gaps = 78/710 (10%)
Query: 13 AEEFKFYLEE--------YAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRID 64
A+E K+YL+ G G PT + I +CTIE+ + LI LI+EN++D
Sbjct: 155 AKEKKYYLQSLFQEIGINVDGYMGSTSPTG-HFSSLDIAVCTIERANGLINRLIEENKMD 213
Query: 65 EIGLIVIDEFHMLNEPQRGPILECVVSKVLY---------------LKKSIQIFAMSATI 109
+G++V+DE HML + RG +LE +++K+ Y L ++QI MSAT+
Sbjct: 214 LLGMVVVDELHMLGDSHRGYLLELLLTKICYITHKSASCQADLASPLSNAVQIVGMSATL 273
Query: 110 GNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGP 169
N+ +++++ Y N RP E V + ++ S L + NL
Sbjct: 274 PNLEIVASWLNAELYHTNFRPVPLLESVKIGNSIYDS--SMKLVREFQPNLQVK---GDE 328
Query: 170 DAVLHL----VQGNLMVLIFCSSKIACSNLA---------LRLQFDRFPGTKEYKKQ--E 214
D V+ L + N VLIFC SK C LA L Q + E E
Sbjct: 329 DHVVSLCYETICDNHSVLIFCPSKKWCEKLADIIACEFYNLHHQATGLVRSSELPPVVLE 388
Query: 215 KEDLIEALKE--ENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCT 272
++ L+E + + + L + L++ I +GVA+HHA LT ER +IE A+ G ++++ T
Sbjct: 389 QKGLLEVMDQLKRSPSGLDSVLQKTIPWGVAFHHAGLTFEERDIIEGAFRQGQIRVLAAT 448
Query: 273 STLAAGVNLPAQRVIIRDSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFL 332
STL++GVNLPA+RVIIR G + + YKQMVGRAGR G+ GESI++CK +
Sbjct: 449 STLSSGVNLPARRVIIRTPIFGGQPLDILTYKQMVGRAGRKGVDTVGESILVCKNSEKS- 507
Query: 333 RFSSMMNAGPEPISSHMD-------PPTLVDLILEVVAANLCSSLEDVKTLIKHTLFY-- 383
+ +++ +P+ S + +++ ILE++ + S+ +D++T T
Sbjct: 508 KGIALLQGSLKPVRSCLQRQKGEEVTASMIRAILEIIVGGVASTSQDMQTYASCTFLAAS 567
Query: 384 ----QLKSPEDQQTFLETTLSEIVASLLASKGTMLTMNEAGH----LSLTSIAKAAVQAG 435
+L S ++Q + V LL ++ +T G T + A + +
Sbjct: 568 MKEGKLGSQKNQDCVQLGAIEACVMWLLENEFIQITETGDGTEGKLYHPTHLGSATLSSS 627
Query: 436 LSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEYRIPSDGILLSRSKVYDRYTKFHP 495
LS L I++DL F L N LH+++LV P+ D + + + + K
Sbjct: 628 LSPTDTLDIFADLQRAMKGFVLENDLHIVYLVTPMF----EDWATIDWYRFFCLWEKLPT 683
Query: 496 QTLRVAEALGVTENLVALNVTGKL--KDEKK----ALLCRFFHACILYDVLNFDNHQKVA 549
RVAE +GV E +A V GK+ + E++ A+ RFF + +L D+++ +++
Sbjct: 684 SMKRVAELVGVEEGFLARCVKGKVVARTERQHRQMAIHKRFFTSLVLLDLISEVPLKEIN 743
Query: 550 KMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELWCYKQ-LLTDLPQTLMYCRAPNLRAL 608
+ YG +Q+ + +A + F L W + LL+ + L + L L
Sbjct: 744 QKYGCSRGQIQSLQQSAAVYAGMITVFSNRLG--WHNMELLLSQFQKRLTFGIQRELCDL 801
Query: 609 MDLPGVKIGRARQLLNAGYSSLELIARADAKEMVAKIRH-LPLRSARNLI 657
+ + + RAR L +G+ ++ +ARA+ E+ A +++ +P +SAR +
Sbjct: 802 VRVSLLNAQRARFLYASGFLTVADLARANIAEVEAVLKNAVPFKSARKAV 851
>gi|449662053|ref|XP_002164745.2| PREDICTED: DNA polymerase theta-like [Hydra magnipapillata]
Length = 1898
Score = 239 bits (611), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 197/663 (29%), Positives = 321/663 (48%), Gaps = 54/663 (8%)
Query: 37 LNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYL 96
LN I +CTIEK + LI L++ +I ++ +V+DE HM+ + RG +LE +++K+ +L
Sbjct: 233 LNTVDIAVCTIEKANSLINKLMESKKILDLCCVVVDEMHMIGDVGRGYLLELLLTKIKFL 292
Query: 97 KKS----IQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSFDGKSL 152
S IQI MSAT+ N++ L+ +++ Y N RP +E++ V + S GK +
Sbjct: 293 TASNDAEIQIIGMSATLPNLDMLAKWLKADLYFTNFRPVPLTEHIKVGNHILNS-SGKEV 351
Query: 153 TEIYA-DNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRLQ--FDRFPGTKE 209
+ + + G P V +V+GN VLIFC +K C L+ + F + P
Sbjct: 352 SIVSNYGGIKGDEEGIIPLCVETIVEGN-SVLIFCPTKNWCEKLSETISEYFLQNPMGIS 410
Query: 210 YKKQEK----------------EDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGE 253
+K + ED+IE L+ G L LE+ + GVAYHHA LT E
Sbjct: 411 FKTSSESNHKKSGFPLISKVLIEDVIEQLQRTQVG-LDKMLEKVVRQGVAYHHAGLTIDE 469
Query: 254 RRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGRDFISLNMYKQMVGRAGRT 313
R ++E A+ G L+I+ TSTL++GVNLPA+RVIIR + +YKQM GRAGR
Sbjct: 470 RDILEGAFRRGVLRILVATSTLSSGVNLPARRVIIRSPIFHGQLLEPMIYKQMAGRAGRK 529
Query: 314 GLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHM-------DPPTLVDLILEVVAANL 366
+ GESI++CK + + S++ + P+ S + + TL +LEV+AA +
Sbjct: 530 NVDSEGESILICKPTEK-QKGLSLLTSDLVPVYSCLLRKDGEGNSKTLKRALLEVIAAGV 588
Query: 367 CSSLEDVKTLIKHTLFY---QLKSPEDQQTFLETTLSEIVASLLASKGTMLTMNEAGHLS 423
S E V+ + T + S +D + T+ ++ + + E + +
Sbjct: 589 ASQPEHVQLYAQSTYLHVCLSAISDKDPDQSISDTMKFLIDNEFIRLEKVNNEQEENYFA 648
Query: 424 LTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIP--LEYRIPSDGILL 481
T + A + + LS D L++ +L + F L N LH+++ V P L+ + P L
Sbjct: 649 -TQLGSATLASSLSPDEALLVLGELREARKRFVLENELHIIYQVTPIYLQDQWPE----L 703
Query: 482 SRSKVYDRYTKFHPQTLRVAEALGVTENLVAL----NVTGKLKDEKKALLC--RFFHACI 535
Y+ + K + V E +GV E +A V K +++ + L RF+ A I
Sbjct: 704 DWQIYYNIWEKLPAEFKAVGELVGVQERFLARAFRNGVQQKNENQMRVLRIHKRFYAALI 763
Query: 536 LYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELW-CYKQLLTDLP 594
L D++N V+ Y I LQ+ N S FA V FC++L W C + LL
Sbjct: 764 LQDLVNEVPLSHVSNRYKINRGLLQSLQNSASTFAGMVTVFCQKLG--WSCLELLLEQFQ 821
Query: 595 QTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIARADAKEMVAKIRH-LPLRSA 653
L + + L L+ +P + AR GY ++ + A +++ +R +P S
Sbjct: 822 SRLSFGVSRELCNLVRIPLLSGFMARTFYEKGYQTVSTLVSASVEDIARILRDAIPFESK 881
Query: 654 RNL 656
++L
Sbjct: 882 KSL 884
>gi|194901634|ref|XP_001980357.1| GG17101 [Drosophila erecta]
gi|190652060|gb|EDV49315.1| GG17101 [Drosophila erecta]
Length = 2037
Score = 239 bits (611), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 196/685 (28%), Positives = 333/685 (48%), Gaps = 83/685 (12%)
Query: 15 EFKFYLEE--------YAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEI 66
E FYL++ G G Y P + ICTIEK + ++ L+++ +++ I
Sbjct: 290 EKMFYLQDLLTPAGYRVEGFYGGYTPPG-GFESLHVAICTIEKANSIVNKLMEQGKLETI 348
Query: 67 GLIVIDEFHMLNEPQRGPILECVVSKVLYLKK----SIQIFAMSATIGNINALSTFIEGI 122
G +V+DE H++++ RG ILE +++K+LY+ + IQ+ MSAT+ N+ L ++++
Sbjct: 349 GTVVVDEVHLISDKGRGYILELLLAKILYMSRRSALQIQVITMSATLENVELLKSWLDAE 408
Query: 123 TYVENSRPTKHSEYVTVDKRVFQSF--------DGKSLTEIYADNLDYSLTGSGPDAVLH 174
Y+ N RP E + V ++++ + + K + + A++ D D L
Sbjct: 409 LYITNYRPVALKEMIKVGEKIYDNHLRIIRDVSEQKEIKQALANDSD--------DVALL 460
Query: 175 LVQGNL---MVLIFCSSKIACSNLA------------------LRLQFDRFPGTKEYKKQ 213
++ L V++FC SK C NLA LRL+ + P E KQ
Sbjct: 461 CIETLLEGCSVIVFCPSKDWCENLAVQLATAMHGIIKSGSELGLRLRTNLNPRAIEEVKQ 520
Query: 214 EKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTS 273
+ D+ L DG +S + + Y A+HHA LT ER ++E ++ AG L+++ TS
Sbjct: 521 QLRDIPTGL----DGVMS----KAVTYACAFHHAGLTTEERDIVEASFKAGALKVLVATS 572
Query: 274 TLAAGVNLPAQRVIIRDS-YVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFL 332
TL++GVNLPA+RV+IR + G+ SL Y+QM+GRAGRTG GESI++C T
Sbjct: 573 TLSSGVNLPARRVLIRSPLFCGKQMSSLT-YRQMIGRAGRTGKDTLGESIVIC-TESTAR 630
Query: 333 RFSSMMNAGPEPISS--HMDPPT-LVDLILEVVAANLCSSLEDVKTLIKHTLFYQLKSPE 389
++ A +PI+S MD T L +LEV+++ + S+ +D+ + TL K+ +
Sbjct: 631 MGRDLVTAQLQPITSCLEMDGSTHLKRALLEVISSGVASTKQDIDCFVNCTLLSAQKAFQ 690
Query: 390 DQQTFLETT-----LSEIVASLLASKGTMLTMNEAGHLS---LTSIAKAAVQAGLSHDVC 441
+ L+ +++ + L+ + L +E + T + A + + +
Sbjct: 691 AKDKPLDEDSDSHYINDALDFLVEYEFVRLQRDEEEETTSYVATRLGAACLASSMPPTDG 750
Query: 442 LIIYSDLLHNKLNFCLLNSLHMLFLVIPLE--YRIPSDGILLSRSKVYDRYTKFHPQTLR 499
LI++++L ++ F L + LH ++LV P Y++ L+ D + K P +
Sbjct: 751 LILFAELQKSRRCFVLESELHAVYLVTPYSVCYQLQDLDWLI----YLDMWEKLSPAMKK 806
Query: 500 VAEALGVTENLVALNVTGKLKDEKKALLC--RFFHACILYDVLNFDNHQKVAKMYGIQNS 557
V E +GV E + + G+ K + K + RF+ A L +++N V +
Sbjct: 807 VGELVGVKEAFLVKAMRGQTKLDYKQMQVHKRFYTALALQELVNETPINVVVHKFKCHRG 866
Query: 558 HLQNFLNVTSYFASKVYRFCEELPELWCYKQLL-TDLPQTLMYCRAPNLRALMDLPGVKI 616
LQ+ + S FA V FC L W L+ + L + +L LM LP +
Sbjct: 867 MLQSLQQMASTFAGIVTAFCNSLQ--WSTLALIVSQFKDRLFFGIHRDLIDLMRLPDLSQ 924
Query: 617 GRARQLLNAGYSSLELIARADAKEM 641
RAR L +AG +SL +A AD E+
Sbjct: 925 KRARALFDAGLTSLVELAGADVLEL 949
>gi|395733254|ref|XP_002813286.2| PREDICTED: LOW QUALITY PROTEIN: DNA polymerase theta [Pongo abelii]
Length = 2597
Score = 239 bits (609), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 200/718 (27%), Positives = 346/718 (48%), Gaps = 100/718 (13%)
Query: 13 AEEFKFYLE---EYAGVK-----GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRID 64
A+E K+YL+ + G+K G P+ R + I +CTIE+ + LI LI+EN++D
Sbjct: 156 AKEKKYYLQSLFQEVGIKVDGYMGSTSPS-RHFSSLDIAVCTIERANGLINRLIEENKMD 214
Query: 65 EIGLIVIDEFHMLNEPQRGPILECVVSKVLYL---------------KKSIQIFAMSATI 109
+G++V+DE HML + RG +LE +++K+ Y+ ++QI MSAT+
Sbjct: 215 LLGMVVVDELHMLGDSHRGYLLELLLTKICYITWKSASCQADLASSVSNAVQIVGMSATL 274
Query: 110 GNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSF-----DGKSLTEIYADNLDYSL 164
N+ +++++ Y + RP E V V ++ S + + + ++ D
Sbjct: 275 PNLELVASWLNAELYHTDFRPVPLLESVKVGNSIYDSSMKLVREFEPMLQVKGDE----- 329
Query: 165 TGSGPDAVLHL----VQGNLMVLIFCSSKIACSNLA---------LRLQFDRFPGTKE-- 209
D V+ L ++ N VL+FC SK C LA LR Q + E
Sbjct: 330 -----DHVVSLCYETIRDNHSVLLFCPSKKWCEKLADIIAREFYNLRHQAEGLVKPSECP 384
Query: 210 ---YKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTL 266
+++E ++++ L+ G L + L++ I +GVA+HHA LT ER +IE A+ G +
Sbjct: 385 PVILEQKELLEVMDQLRRLPSG-LDSVLQKTIPWGVAFHHAGLTFEERDIIEGAFRQGLI 443
Query: 267 QIICCTSTLAAGVNLPAQRVIIRDSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCK 326
+++ TSTL++GVNLPA+RVIIR G + + YKQMVGRAGR G+ GESI++CK
Sbjct: 444 RVLAATSTLSSGVNLPARRVIIRTPIFGGRPLDILTYKQMVGRAGRKGVDTVGESILICK 503
Query: 327 TMQDFLRFSSMMNAGPEPISSHMD-------PPTLVDLILEVVAANLCSSLEDVKTLIKH 379
+ + +++ +P+ S + +++ ILE++ + S+ +D+ T
Sbjct: 504 NSEKS-KGIALLQGSLKPVRSCLQRREGEEVTASMIRAILEIIVGGVASTSQDMHTYAAC 562
Query: 380 TLF----------YQLKSPEDQQTFLETTL-----SEIVASLLASKGTMLTMNEAGHLSL 424
T Q Q +E + +E + S AS GT + HL
Sbjct: 563 TFLAASMKDGKQGIQRNQESVQLGAIEACVMWLLENEFIQSTEASDGTEGKVYHPTHL-- 620
Query: 425 TSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEYRIPSDGILLSRS 484
A + + LS L I++DL F L N LH+L+LV P+ D +
Sbjct: 621 ---GSATLSSSLSPADTLDIFADLQRAMKGFVLENDLHILYLVTPMF----EDWTTIDWY 673
Query: 485 KVYDRYTKFHPQTLRVAEALGVTENLVALNVTGKL------KDEKKALLCRFFHACILYD 538
+ + + K RVAE +GV E +A V GK+ + + A+ RFF + +L D
Sbjct: 674 RFFCLWEKLPTSMKRVAELVGVEEGFLARCVKGKVVARTERQHRQMAIHKRFFTSLVLLD 733
Query: 539 VLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELWCYKQ-LLTDLPQTL 597
+++ +++ + YG +Q+ + +A + F L W + LL++ + L
Sbjct: 734 LISEVPLREINQKYGCNRGQIQSLQQSAAVYAGMITVFSNRLG--WHNMELLLSEFQKRL 791
Query: 598 MYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIARADAKEMVAKIRH-LPLRSAR 654
+ L L+ + + RAR L +G+ ++ +ARA+ E+ +++ +P +SAR
Sbjct: 792 TFGIQRELCDLVRVSLLNAQRARVLYASGFHTVADLARANIVEVEVILKNAVPFKSAR 849
>gi|195500591|ref|XP_002097437.1| GE24491 [Drosophila yakuba]
gi|194183538|gb|EDW97149.1| GE24491 [Drosophila yakuba]
Length = 2043
Score = 239 bits (609), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 197/682 (28%), Positives = 325/682 (47%), Gaps = 77/682 (11%)
Query: 15 EFKFYLEE--------YAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEI 66
E FYL++ G G Y P + ICTIEK + ++ L+++ +++ I
Sbjct: 293 EKMFYLQDLLTPAGYRVEGFYGGYTPPG-GFESLHVAICTIEKANSIVNKLMEQGKLETI 351
Query: 67 GLIVIDEFHMLNEPQRGPILECVVSKVLYLKK----SIQIFAMSATIGNINALSTFIEGI 122
G +V+DE H++++ RG ILE +++K+LY+ + IQ+ MSAT+ N+ L +++
Sbjct: 352 GTVVVDEVHLISDKGRGYILELLLAKILYMSRRNALQIQVITMSATLENVELLKNWLDAE 411
Query: 123 TYVENSRPTKHSEYVTVDKRVFQ---------SFDGKSLTEIYADNLDYSLTGSGPDAVL 173
Y+ N RP E + V +F S + E+ D+ D + +
Sbjct: 412 LYITNYRPVALKEMIKVGTGIFDNHLKLLRNVSEQREIREELVNDSDDVAFL-----CIE 466
Query: 174 HLVQGNLMVLIFCSSKIACSNLA------------------LRLQFDRFPGTKEYKKQEK 215
L++G V++FC SK C NLA LRL+ + P E KQ+
Sbjct: 467 TLLEG-CSVIVFCPSKDWCENLAVQLATAMHGLIKSGTELGLRLRTNLNPRAIEEVKQQL 525
Query: 216 EDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTL 275
D+ L D +S + + Y A+HHA LT ER ++E ++ AG L+++ TSTL
Sbjct: 526 RDIPTGL----DAVMS----KAVTYACAFHHAGLTTEERDIVEASFKAGALKVLVATSTL 577
Query: 276 AAGVNLPAQRVIIRDSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFS 335
++GVNLPA+RV+IR G +S Y+QM+GRAGRTG GESI++C T +
Sbjct: 578 SSGVNLPARRVLIRSPLFGGKQMSSLTYRQMIGRAGRTGKDTLGESILIC-TESNARIGR 636
Query: 336 SMMNAGPEPISS--HMDPPT-LVDLILEVVAANLCSSLEDVKTLIKHTLF-----YQLKS 387
++ A +PI+S MD T L +LEV+++ + S+ +D+ + TL +Q K
Sbjct: 637 DVVTAQLQPITSCLEMDGSTHLKRALLEVISSGVASTKQDIDCFVNCTLLSAQKAFQAKE 696
Query: 388 PEDQQTFLETTLSEIVASLLASKGTMLTMNEAGHLS---LTSIAKAAVQAGLSHDVCLII 444
Q +++ + L+ + L +E + T + A + + + LI+
Sbjct: 697 KPPDQDSDSHYINDALDFLVEYEFVRLQKDEEEETTAYVATRLGAACLASSMPPTDGLIL 756
Query: 445 YSDLLHNKLNFCLLNSLHMLFLVIPLE--YRIPSDGILLSRSKVYDRYTKFHPQTLRVAE 502
+++L ++ F L + LH ++LV P Y++ L+ D + K P +V E
Sbjct: 757 FAELQKSRRCFVLESELHAVYLVTPYSVCYQLQDLDWLI----YLDMWEKLSPAMKKVGE 812
Query: 503 ALGVTENLVALNVTGKLKDEKKALLC--RFFHACILYDVLNFDNHQKVAKMYGIQNSHLQ 560
+GV E + + G+ K + K + RF+ A L +++N V + LQ
Sbjct: 813 LVGVKEAFLVKAMRGQTKLDYKQMQVHKRFYTALALQELVNETPINVVVHKFKCHRGMLQ 872
Query: 561 NFLNVTSYFASKVYRFCEELPELWCYKQLL-TDLPQTLMYCRAPNLRALMDLPGVKIGRA 619
+ + S FA V FC L W L+ + L + +L LM LP V RA
Sbjct: 873 SLQQMASTFAGIVTAFCNSLQ--WSTLALIVSQFKDRLFFGIHRDLIDLMRLPDVSQKRA 930
Query: 620 RQLLNAGYSSLELIARADAKEM 641
R L +AG +SL +A AD E+
Sbjct: 931 RALFDAGLTSLVELAGADVLEL 952
>gi|328724320|ref|XP_003248104.1| PREDICTED: DNA polymerase theta-like isoform 2 [Acyrthosiphon
pisum]
Length = 1583
Score = 239 bits (609), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 195/649 (30%), Positives = 316/649 (48%), Gaps = 61/649 (9%)
Query: 28 GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILE 87
G Y PT L ++ I TIEK + +I LI+E+ + ++G IV+DE HML + RG +LE
Sbjct: 2 GSYTPTG-GLRSVNVAIATIEKANGIINRLIEEDGLQDVGCIVVDELHMLGDSNRGYLLE 60
Query: 88 CVVSKVLYLKK-----SIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKR 142
+++K+ Y+ K SIQI MSAT+ N++ L+ +++ Y + RP EY+ + K+
Sbjct: 61 LLLTKIKYMSKIRSNLSIQIVGMSATLPNLDILAKWLDATLYHTDYRPVPLKEYLKIGKK 120
Query: 143 VFQSFDGKSLTEIYADNLDYSLT-------GSGPDAVLHLVQGNLM----VLIFCSSKIA 191
V+ A+NL S T + PD V +L ++ +LIFC +K
Sbjct: 121 VYN-----------ANNLSLSHTIEPSVVIKNDPDDVKYLCIDTILQGYSILIFCFTKKW 169
Query: 192 CSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGK-----------LSTNLEECILY 240
C +LAL + + + K + DL L E+ G L T+L + I +
Sbjct: 170 CESLALEIASEIKHLGGDNKSKVGNDLRNQLNGESLGDVLEQLRRCPVGLETDLSKTISF 229
Query: 241 GVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGRDFISL 300
GVA+HHA LT ER +IE A+ ++++ TSTL++GVNLPA+RVI+R + I +
Sbjct: 230 GVAFHHAGLTMDERDIIEGAFKQNIVRVLIATSTLSSGVNLPARRVIVRSPHCHGFPIDI 289
Query: 301 NMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMD----PPTLVD 356
Y+QM+GRAGR G+ +GES ++C + + P PI S + L
Sbjct: 290 LQYRQMIGRAGRMGVDTAGESYLICNENERRMGEEIATQNLP-PIKSCLGVGDFSSCLKR 348
Query: 357 LILEVVAANLCSSLEDVKTLIKHTLFYQLKSPEDQQTFLETTLSEIVASLLASKGTMLTM 416
+LEVVA + + E+ IK TL Y S + ET ++E + L+ +
Sbjct: 349 ALLEVVAGCVVCTTEEAFEYIKCTLLYISNS----ENLNETPINECLKLLIEHQ---FVR 401
Query: 417 NEAGHLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEYRIPS 476
LS T++ +A + A ++ ++ L + +L + NF L + LH+L+L+ P Y +
Sbjct: 402 ENDNKLSPTNLGQACLAASVTPEIGLKLIKELDRARQNFVLDSELHLLYLITP--YSVSD 459
Query: 477 DGILLSRSKVYDRYTKFHPQTLRVAEALGVTENLVALNVTG-----KLKDEKKALLCRFF 531
L +V + K +V + +G+ E + +TG K A+ RF+
Sbjct: 460 QIGHLDWFRVLHVWEKLPHSMRKVGDMIGIEEGFIVKAMTGTSFSTSSDKHKLAVHRRFY 519
Query: 532 HACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELWCYKQLL- 590
+L+D++N V YG LQ+ +S FA V +FC+ L W +LL
Sbjct: 520 TTLLLHDLINEIPINTVVLKYGTSKGLLQSLQQSSSTFAGMVTQFCKRLG--WSSLELLI 577
Query: 591 TDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIARADAK 639
+ + L + L L+ L + AR L NAG ++ +A AD +
Sbjct: 578 SQFSERLQFGVQRQLVELLRLDCLNSITARTLYNAGIQNIPELALADLR 626
>gi|426217534|ref|XP_004003008.1| PREDICTED: DNA polymerase theta [Ovis aries]
Length = 2594
Score = 238 bits (608), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 198/708 (27%), Positives = 342/708 (48%), Gaps = 80/708 (11%)
Query: 13 AEEFKFYLE---EYAGVK-----GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRID 64
A+E K+YL+ + G+K G PT R + I +CTIE+ + LI LI+EN++D
Sbjct: 156 AKEKKYYLQSLFQEVGIKVDGYMGSTSPT-RHFSSLDIAVCTIERANGLINRLIEENKMD 214
Query: 65 EIGLIVIDEFHMLNEPQRGPILECVVSKVLY---------------LKKSIQIFAMSATI 109
+G++V+DE HML + RG +LE +++K+ Y L +IQI MSAT+
Sbjct: 215 LLGMVVVDELHMLGDSHRGYLLELLLTKICYITQKSASCQADLAIPLSNAIQIVGMSATL 274
Query: 110 GNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGP 169
N+ +++++ Y + RP E + + ++ S L + L
Sbjct: 275 PNLELVASWLNAELYHTDFRPVPLLESIKIGNSIYDS--SMKLVREFQPTLQVK---GDE 329
Query: 170 DAVLHL----VQGNLMVLIFCSSKIACSNLA---------LRLQFDRFPGTKEYKKQ--E 214
D V+ L ++ N VL+FC SK C LA L Q + + E+ E
Sbjct: 330 DHVVSLCYETIRDNHSVLLFCPSKKWCEKLADIIAREFYSLHHQAEGLVRSSEFPPVMLE 389
Query: 215 KEDLIEALKE--ENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCT 272
++ L+E + + + L + L++ + +GVA+HHA LT ER +IE A+ G ++++ T
Sbjct: 390 QKGLLEVMDQLKRSPSGLDSVLQKTVPWGVAFHHAGLTFEERDIIEGAFRQGQIRVLAAT 449
Query: 273 STLAAGVNLPAQRVIIRDSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFL 332
STL++GVNLPA+RVIIR + + YKQMVGRAGR G+ GESI++CK +
Sbjct: 450 STLSSGVNLPARRVIIRTPIFSGRLLDILTYKQMVGRAGRKGVDTVGESILVCKNSEKSQ 509
Query: 333 RFSSMMNAGPEPISSHMD-------PPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQL 385
+++ +P+ S + +++ ILE++ + S+ +D++T T F
Sbjct: 510 GI-TLLQGSLKPVRSCLQRQEGEEVTSSMIRAILEIIVGGVASTSQDIQTYASCT-FLAA 567
Query: 386 KSPEDQQTFLETTLSEIVASLLAS-----KGTMLTMNEAGHLS------LTSIAKAAVQA 434
E +Q + S + ++ A + + M EA + T + A + +
Sbjct: 568 SMKEGKQGIQKNKDSVQLGAIEACVMWLLENEFIQMTEASDGTEGNVYHPTHLGSATLSS 627
Query: 435 GLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEYRIPSDGILLSRSKVYDRYTKFH 494
LS L I++DL F L N LH+++LV P + D + + + + K
Sbjct: 628 SLSPVDTLDIFADLQRAMKGFVLENDLHIVYLVTP----VFEDWTTIDWYRFFCLWEKLP 683
Query: 495 PQTLRVAEALGVTENLVALNVTGKL--KDEKK----ALLCRFFHACILYDVLNFDNHQKV 548
RVAE +GV E +A V G L + E++ A+ RFF + +L D+++ +++
Sbjct: 684 ASMKRVAELVGVEEGFLARCVKGNLVARTERQHRQMAIHKRFFTSLVLLDLISEVPLKEI 743
Query: 549 AKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELWCYKQ-LLTDLPQTLMYCRAPNLRA 607
+ YG +Q+ + +A V F L W + LL+ + L + L
Sbjct: 744 NQKYGCNRGQIQSLQQSAAVYAGMVTVFSNRLG--WHNMELLLSQFQKRLTFGIQRELCD 801
Query: 608 LMDLPGVKIGRARQLLNAGYSSLELIARADAKEMVAKIRH-LPLRSAR 654
L+ + + RAR L +G+ ++ +ARAD E+ + +++ P +S R
Sbjct: 802 LVRVSLLNAQRARFLYASGFLTVADLARADVAEVESVLKNAAPFKSTR 849
>gi|195069821|ref|XP_001997038.1| GH25245 [Drosophila grimshawi]
gi|193905759|gb|EDW04626.1| GH25245 [Drosophila grimshawi]
Length = 2235
Score = 238 bits (607), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 193/635 (30%), Positives = 314/635 (49%), Gaps = 49/635 (7%)
Query: 42 IYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKK--- 98
+ ICTIEK + ++ L+++ ++DEIG +V+DE H++++ RG ILE +++KVLY+ +
Sbjct: 395 VAICTIEKANSIVNKLLEQGKLDEIGTVVVDEVHLISDAGRGYILELLLAKVLYMSRKHG 454
Query: 99 -SIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYA 157
IQI MSAT+ N+ L ++ Y+ + RP E + V +++ + + L I +
Sbjct: 455 LQIQIITMSATLANVQLLQQWLNAELYITDYRPVALQEMIKVGNKIYDN-QLRFLRNISS 513
Query: 158 DNLDYSLTGSGPDAVLHLVQGNLM----VLIFCSSKIACSNLALRLQF-------DRFPG 206
+ + G+ D V L L+ V++FC SK C NLA++L
Sbjct: 514 SS-EVPPLGNDADHVAQLCIETLLEGCSVVVFCPSKDWCENLAVQLATAMHALIKSDSKL 572
Query: 207 TKEYKKQEKEDLIEALKEE-ND--GKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLA 263
K + Q + IE +K++ D L + + I YG A+HHA LT ER ++E ++ A
Sbjct: 573 AKRLRSQLNTESIEVVKQQLRDIPTGLDAVMSKAITYGCAFHHAGLTTEERDIVEASFKA 632
Query: 264 GTLQIICCTSTLAAGVNLPAQRVIIRDSYVGRDFISLNMYKQMVGRAGRTGLQESGESIM 323
G L++I TSTL++GVNLPA+RV+IR G +S Y+QM+GRAGRTG GESI+
Sbjct: 633 GALKVIVATSTLSSGVNLPARRVLIRSPLFGGKQMSSLTYRQMIGRAGRTGKDTLGESIL 692
Query: 324 LCKTMQDFLRFSSMMNAGPEPISSHMD---PPTLVDLILEVVAANLCSSLEDVKTLIKHT 380
+C T + ++ A +PI S +D L +LEV++ + SS +DV + T
Sbjct: 693 IC-TESNARIGRELVTAQLKPIRSCLDLDGSTHLKRALLEVISG-VASSKKDVDSFFNCT 750
Query: 381 LFYQLKS--PEDQQTFLETTLSEIVASLLASKGTMLTMNE-----------AGHLSLTSI 427
L K+ P+ + + E + +A L E H T +
Sbjct: 751 LLSAQKTLNPQVDKETEDEDKDEDESHYIADALDFLVEYEFIRLQTDEETDTEHYVATRL 810
Query: 428 AKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLE--YRIPSDGILLSRSK 485
A + + + LI++++L ++ F L + LH ++LV P Y++ LL
Sbjct: 811 GAACLASSMPPTDGLILFAELQKSRRCFVLESELHAVYLVTPYSVCYQLQDVDWLL---- 866
Query: 486 VYDRYTKFHPQTLRVAEALGVTENLVALNVTGKLKDEKKALLC--RFFHACILYDVLNFD 543
D + K +P +V E +GV E + + G+ K + K + RF+ A L +++N
Sbjct: 867 YLDMWEKLNPAMKKVGELIGVKEAFLVRAMRGQTKLDYKLMQIHKRFYTALALQELVNET 926
Query: 544 NHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELWCYKQL-LTDLPQTLMYCRA 602
VA + Q LQ+ + S FA V FC L W L ++ L +
Sbjct: 927 PINVVAHKFKCQRGMLQSLQQMASTFAGIVTAFCNSLQ--WSTLALVVSQFKDRLYFGIH 984
Query: 603 PNLRALMDLPGVKIGRARQLLNAGYSSLELIARAD 637
+L LM LP + RAR L +AG +SL +A A+
Sbjct: 985 RDLIDLMRLPDLTHKRARLLHDAGITSLVELAGAN 1019
>gi|395844785|ref|XP_003795132.1| PREDICTED: LOW QUALITY PROTEIN: DNA polymerase theta [Otolemur
garnettii]
Length = 2588
Score = 238 bits (607), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 200/720 (27%), Positives = 347/720 (48%), Gaps = 98/720 (13%)
Query: 13 AEEFKFYLE---EYAGVK-----GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRID 64
A+E K+YL+ + G+K G PT R + + +CTIE+ + LI LI+EN+++
Sbjct: 156 AKEKKYYLQSLFQEVGIKVDGYMGSTSPTGR-FSSLDVAVCTIERANGLINRLIEENKMN 214
Query: 65 EIGLIVIDEFHMLNEPQRGPILECVVSKVLY---------------LKKSIQIFAMSATI 109
+G++V+DE HML + RG +LE +++K+ Y L ++QI MSAT+
Sbjct: 215 LLGMVVVDELHMLGDSHRGYLLELLLTKICYITQKSASCQSDLASPLTNAVQIVGMSATL 274
Query: 110 GNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSF-----DGKSLTEIYADNLDYSL 164
N++ +++++ Y N RP E V + ++ S + + + ++ D
Sbjct: 275 PNLDLVASWLNAELYHTNFRPVPLLESVKIGNSLYDSSMKLVREFQPILQVKGDE----- 329
Query: 165 TGSGPDAVLHL----VQGNLMVLIFCSSKIACSNLA---------LRLQFDRFPGTKEYK 211
D V++L + N VL+FC SK C LA L Q E+
Sbjct: 330 -----DHVVNLCYETICDNHSVLLFCPSKKWCEKLADTIAREFYNLHHQAQGLVKPSEFP 384
Query: 212 KQ--EKEDLIEALKEEN--DGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQ 267
E++DL+E + + L + L++ + +GVA+HHA LT ER +IE A+ G ++
Sbjct: 385 PVMLEQKDLLEVMDQLRRLPSGLDSVLQKTVPWGVAFHHAGLTFEERDIIEGAFRQGLIR 444
Query: 268 IICCTSTLAAGVNLPAQRVIIRDSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKT 327
++ TSTL++GVNLPA+RVIIR G + + YKQMVGRAGR G+ GESI++CK
Sbjct: 445 VLAATSTLSSGVNLPARRVIIRTPIFGGRPLDVLTYKQMVGRAGRKGVDTVGESILVCKN 504
Query: 328 MQDFLRFSSMMNAGPEPISSHMD-------PPTLVDLILEVVAANLCSSLEDVKTLIKHT 380
+ + +++ +P+ S + +++ ILE++ + S+ ED++T T
Sbjct: 505 AEKS-KGMALLQGSLKPVRSCLQRREGEEVTASMIRAILEIIVGGVASTSEDMQTYASCT 563
Query: 381 LF----------YQLKSPEDQQTFLETTL-----SEIVASLLASKGTMLTMNEAGHLSLT 425
Q Q +E + +E + AS GT + HL
Sbjct: 564 FLAASMKKGKQGIQRNQDSVQLGAIEACVMWLLENEFIQMTEASDGTEGKVYHPTHL--- 620
Query: 426 SIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEYRIPSDGILLSRSK 485
A + + LS L I++DL F L N LH+++LV P+ D ++ +
Sbjct: 621 --GSATLSSSLSPTDTLDIFADLQRAMKGFVLENDLHIVYLVTPMF----EDWTVIDWYR 674
Query: 486 VYDRYTKFHPQTLRVAEALGVTENLVALNVTGKL--KDEKK----ALLCRFFHACILYDV 539
+ + K RVAE +GV E +A V GK+ + E++ A+ RFF + +L D+
Sbjct: 675 FFCLWEKLPTSMKRVAELVGVEEGFLARCVKGKVVARTERQHRQMAIHKRFFTSLVLLDL 734
Query: 540 LNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELWCYKQ-LLTDLPQTLM 598
++ +++ + YG +Q+ + +A + F L W + LL+ + L
Sbjct: 735 ISEVPLKEINQKYGCNRGQIQSLQQSAAVYAGMITVFSNRLG--WHNMELLLSQFQKRLT 792
Query: 599 YCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIARADAKEMVAKIRH-LPLRSARNLI 657
+ L L+ + + RAR L +G+ ++ +ARA+ E+ +++ +P +SAR I
Sbjct: 793 FGVQRELCDLVRVSLLNAQRARALYASGFLTVADLARANIAEVEVVLKNAVPFKSARKAI 852
>gi|357150740|ref|XP_003575560.1| PREDICTED: uncharacterized protein LOC100823290 [Brachypodium
distachyon]
Length = 2057
Score = 238 bits (606), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 188/662 (28%), Positives = 302/662 (45%), Gaps = 86/662 (12%)
Query: 41 SIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKK-- 98
S+ +CTIEK + L+ L+++ R+ E+G+IVIDE HM+ + RG +LE +++K+ Y
Sbjct: 595 SVAVCTIEKANSLVNKLLEDGRLSELGIIVIDELHMVGDQHRGYLLELMLTKLRYAAGEG 654
Query: 99 ---------------------SIQIFAMSATIGNINALSTFIE----------GITYVEN 127
+QI MSAT+ N+ A++ +++ Y
Sbjct: 655 NSESSSGENSSSSSGKTGATHGLQIIGMSATMPNVAAVADWLQVRKLYFFCSYAALYQTT 714
Query: 128 SRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLM----VL 183
RP E++ V ++F K + + L G PD ++ L ++ VL
Sbjct: 715 FRPVPLEEFIKVGNQLFD----KDMNIVRVLPKVADLGGKDPDHIVELCNEVILEGHSVL 770
Query: 184 IFCSSKIACSNLA------LRLQFDRFPGTKEYKK--QEKEDLIEALKEENDGKLSTNLE 235
+FCSS+ C + A L++ + +KE Q+ +EALK G L LE
Sbjct: 771 LFCSSRKGCESTARHIAKYLKVAYVH---SKEVSSEFQDAASAVEALKRCPAG-LDPVLE 826
Query: 236 ECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGR 295
E + GVAYHHA LT ER ++E Y G ++++ TSTLAAGVNLPA+RVI R +GR
Sbjct: 827 ETLPCGVAYHHAGLTVEEREIVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGR 886
Query: 296 DFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHM--DPPT 353
DFI Y+QM GRAGRTG+ GESI++CK ++ R + ++ + P+ S + D
Sbjct: 887 DFIDGTRYRQMAGRAGRTGIDTKGESILVCKP-EEVKRITGIIRSECPPLQSCLSEDKNG 945
Query: 354 LVDLILEVVAANLCSSLEDVKTLIKHTLFYQLKSPEDQQTFLETTLSEIVASLLASKGTM 413
+ I+EVVA + + D+ ++ TL K +D + +L L K +
Sbjct: 946 MTHAIMEVVAGGIVQTASDIHRYVRCTLLNSTKPFDDVVKSAQDSL-----RWLCHKRFV 1000
Query: 414 LTMNEAGHLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEYR 473
N+ S T + +A + L+ + L++ DL + F L + LH+++LV P
Sbjct: 1001 EWNNDTKIYSTTPLGRACFGSSLNPEESLVVLDDLSRAREGFVLASDLHLVYLVTPTNVD 1060
Query: 474 IPSDGILLSRSKVYDRYTKFHPQTLRVAEALGVTENLV-------ALNVTGKLKDEKKA- 525
+ D L Y+R+ + V +GV E + A+ V GK K
Sbjct: 1061 VEPDWELY-----YERFMQLSSLEQSVGNRVGVIEPFLMHMAHGAAMPVRGKSKKNTSGG 1115
Query: 526 -----------LLCRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVY 574
+ RF+ A ++ + V + + + +Q FAS V
Sbjct: 1116 SNSLINEQSLRVSKRFYVALMISRLAQEIPVTDVCESFKVARGTIQALQENAGRFASMVA 1175
Query: 575 RFCEELPELWCYKQLLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIA 634
FC+ L L + L+ + + + L +P VK RAR L N+G + IA
Sbjct: 1176 AFCQRLGWL-DLEGLVAKFQNRVSFGVRAEIAELTSIPFVKGSRARALYNSGLRTPVNIA 1234
Query: 635 RA 636
A
Sbjct: 1235 EA 1236
>gi|158285510|ref|XP_564726.3| AGAP007533-PA [Anopheles gambiae str. PEST]
gi|157020027|gb|EAL41770.3| AGAP007533-PA [Anopheles gambiae str. PEST]
Length = 1997
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 193/682 (28%), Positives = 320/682 (46%), Gaps = 87/682 (12%)
Query: 28 GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILE 87
G +PP + +CTIEK + ++ L++++ + +GL+V+DE H++++P RG ILE
Sbjct: 493 GYHPPGG--FESVDLAVCTIEKANSIVNRLLEQSALTTLGLVVVDEAHLISDPGRGYILE 550
Query: 88 CVVSKVLYL----KKSIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRV 143
+++K+ ++ + IQI MSAT+ NI+ L+ ++E Y + RP E + V +
Sbjct: 551 LLLTKIRFVAARCEHRIQIVCMSATLPNIDLLARWLEADLYHTDFRPIALVEMLKVGNTI 610
Query: 144 FQSFDGKSLTEIYADNLDYSLTGSGPDAVL---HLVQGNLMVLIFCSSKIACSNLALRLQ 200
+ S G+++ + Y++ L + V++FC SK C LA+ L
Sbjct: 611 Y-SASGEAIRYLKGTLHGYTVPKDADHVALLCLETILDGCAVIVFCPSKDWCEQLAISLA 669
Query: 201 FDRFPGTKEYKKQEKEDLIEALKEENDGK---------------LSTNLEECILYGVAYH 245
KE ++L L+E+ DG+ L + LE+ + YGVA+H
Sbjct: 670 STLHTLRKE--NHPHDELRRRLREQLDGERQEEVLLQLRNCPAGLDSVLEKTVRYGVAFH 727
Query: 246 HADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGRDFISLNMYKQ 305
HA LT ER +IE ++ G L+II TSTL++GVNLPA+RVI+R G +S YKQ
Sbjct: 728 HAGLTTDERDIIEGSFRDGALRIIVATSTLSSGVNLPARRVIVRTPKFGGKPMSSLTYKQ 787
Query: 306 MVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDL---ILEVV 362
M+GRAGRTG GESI++C ++ + ++ A P+ S +D L ILE++
Sbjct: 788 MIGRAGRTGRDTLGESILICTPAEEKI-GRELIGAELPPVRSCLDSENYAHLKRAILEII 846
Query: 363 AANLCSSLEDVKTLIKHTLFY-----------QLKSPEDQQT------------------ 393
A+ ++ ++++T + TL+ QL P+ +
Sbjct: 847 ASGSATTTQELETFVNATLYSCERDYRFEVNDQLLRPKASSSKKLPTGEEEDENEETDPI 906
Query: 394 -----------FLETTLSEIV----ASLLASKGTMLTMNEAGHLSLTSIAKAAVQAGLSH 438
F+ +IV ++ K T T+ LS T + +A + A L
Sbjct: 907 VSCISFLLEYEFIRCLQQDIVEEDGSTTATPKSTKRTV-----LSATRLGQACLSASLPP 961
Query: 439 DVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEYRIPSDGILLSRSKVYDRYTKFHPQTL 498
+++S+L + F L + LH ++LV P Y + + D + K +
Sbjct: 962 KDGFLLFSELQRARQCFVLESELHAIYLVTP--YSVAYQWQQIDWMDFLDLWEKLPSASK 1019
Query: 499 RVAEALGVTENLVALNVTGKLKDEKKALLC--RFFHACILYDVLNFDNHQKVAKMYGIQN 556
RV E +GV E+ + + G + + L RF+ A L D++N VA+ +
Sbjct: 1020 RVGELVGVKESFMVRAMRGAANLDYRTLQIHKRFYTALALLDLVNEVPLCTVARRFKCCR 1079
Query: 557 SHLQNFLNVTSYFASKVYRFCEELPELWCYKQLL-TDLPQTLMYCRAPNLRALMDLPGVK 615
LQ+ V+S FA V FC L W QLL + L + A L LM +P +
Sbjct: 1080 GLLQSLQQVSSTFAGIVTSFCASLN--WTLLQLLVAQFRERLFFGVAHELLDLMRIPSLN 1137
Query: 616 IGRARQLLNAGYSSLELIARAD 637
RAR L ++G + L +A +D
Sbjct: 1138 GQRARLLHDSGITGLVQLANSD 1159
>gi|332817593|ref|XP_001165150.2| PREDICTED: DNA polymerase theta isoform 1 [Pan troglodytes]
gi|397509626|ref|XP_003825218.1| PREDICTED: DNA polymerase theta [Pan paniscus]
gi|410355515|gb|JAA44361.1| polymerase (DNA directed), theta [Pan troglodytes]
Length = 2596
Score = 236 bits (602), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 200/719 (27%), Positives = 343/719 (47%), Gaps = 102/719 (14%)
Query: 13 AEEFKFYLE---EYAGVK-----GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRID 64
A+E K+YL+ + G+K G P+ R + I +CTIE+ + LI LI+EN++D
Sbjct: 156 AKEKKYYLQSLFQEVGIKVDGYMGSTSPS-RHFSSLDIAVCTIERANGLINRLIEENKMD 214
Query: 65 EIGLIVIDEFHMLNEPQRGPILECVVSKVLY---------------LKKSIQIFAMSATI 109
+G++V+DE HML + RG +LE +++K+ Y L ++QI MSAT+
Sbjct: 215 LLGMVVVDELHMLGDSHRGYLLELLLTKICYITRKSASCQADLASSLSNAVQIVGMSATL 274
Query: 110 GNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSF-----DGKSLTEIYADNLDYSL 164
N+ +++++ Y + RP E V V ++ S + + + ++ D
Sbjct: 275 PNLELVASWLNAELYHTDFRPVPLLESVKVGNSIYDSSMKLVREFEPMLQVKGDE----- 329
Query: 165 TGSGPDAVLHL----VQGNLMVLIFCSSKIACSNLA---------LRLQFDRFPGTKE-- 209
D V+ L ++ N VL+FC SK C LA L Q + E
Sbjct: 330 -----DHVVSLCYETIRDNHSVLLFCPSKKWCEKLADIIAREFYNLHHQAEGLVKPSECP 384
Query: 210 ---YKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTL 266
+++E ++++ L+ G L + L++ + +GVA+HHA LT ER +IE A+ G +
Sbjct: 385 PVILEQKELLEVMDQLRRLPSG-LDSVLQKTVPWGVAFHHAGLTFEERDIIEGAFRQGLI 443
Query: 267 QIICCTSTLAAGVNLPAQRVIIRDSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCK 326
+++ TSTL++GVNLPA+RVIIR G + + YKQMVGRAGR G+ GESI++CK
Sbjct: 444 RVLAATSTLSSGVNLPARRVIIRTPIFGGRPLDILTYKQMVGRAGRKGVDTVGESILICK 503
Query: 327 TMQDFLRFSSMMNAGPEPISSHMD-------PPTLVDLILEVVAANLCSSLEDVKTLIKH 379
+ + +++ +P+ S + +++ ILE++ + S+ +D+ T
Sbjct: 504 NSEKS-KGIALLQGSLKPVRSCLQRREGEEVTASMIRAILEIIVGGVASTSQDMHTYAAC 562
Query: 380 TLFYQLKSPEDQQTFLETTLS----------------EIVASLLASKGTMLTMNEAGHLS 423
T F E +Q S E + S AS GT + HL
Sbjct: 563 T-FLAASMKEGKQGIQRNQESVQLGAIEACVMWLLENEFIQSTEASDGTEGKVYHPTHL- 620
Query: 424 LTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEYRIPSDGILLSR 483
A + + LS L I++DL F L N LH+L+LV P+ D +
Sbjct: 621 ----GSATLSSSLSPADTLDIFADLQRAMKGFVLENDLHILYLVTPMF----EDWTTIDW 672
Query: 484 SKVYDRYTKFHPQTLRVAEALGVTENLVALNVTGKL------KDEKKALLCRFFHACILY 537
+ + + K RVAE +GV E +A V GK+ + + A+ RFF + +L
Sbjct: 673 YRFFCLWEKLPTSMKRVAELVGVEEGFLARCVKGKVVARTERQHRQMAIHKRFFTSLVLL 732
Query: 538 DVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELWCYKQ-LLTDLPQT 596
D+++ +++ + YG +Q+ + +A + F L W + LL+ +
Sbjct: 733 DLISEVPLREINQKYGCNRGQIQSLQQSAAVYAGMITVFSNRLG--WHNMELLLSQFQKR 790
Query: 597 LMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIARADAKEMVAKIRH-LPLRSAR 654
L + L L+ + + RAR L +G+ ++ +ARA+ E+ +++ +P +SAR
Sbjct: 791 LTFGIQRELCDLVRVSLLNAQRARVLYASGFHTVADLARANIVEVEVILKNAVPFKSAR 849
>gi|367019870|ref|XP_003659220.1| hypothetical protein MYCTH_2114843 [Myceliophthora thermophila ATCC
42464]
gi|347006487|gb|AEO53975.1| hypothetical protein MYCTH_2114843 [Myceliophthora thermophila ATCC
42464]
Length = 940
Score = 236 bits (601), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 179/638 (28%), Positives = 306/638 (47%), Gaps = 50/638 (7%)
Query: 42 IYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQ 101
I +CTIEK + L+ + I++ I + +V+DE HM+++ RG ++E + +K+L L + +Q
Sbjct: 267 IAVCTIEKANSLVNTAIEDCSISSLRAVVLDECHMIDDDYRGYLIELMTTKLLCLGQPLQ 326
Query: 102 IFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLD 161
I MSAT+ NI L +++G +Y RP E++ D +++ S +L + A D
Sbjct: 327 IIGMSATLTNIELLKRWLQGHSYETRYRPVPIEEHLVCDGKIYGSETTAALLKASAAQPD 386
Query: 162 YS----LTGSGP-----------------DAVLHL----VQGNLMVLIFCSSKIACSNLA 196
L G P +AV+ L V+ VL+F SS+ C + A
Sbjct: 387 TGSQCGLPGLQPMRLIKPSDHKELADPVRNAVVALANETVRAGYGVLVFASSRAGCESDA 446
Query: 197 LRLQ--FDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGER 254
L + F ++++ DL+ L+ + G L LE+ I +GVA+HHA LT ER
Sbjct: 447 LLISRVLPTFAEADPLIQEKRLDLLGDLRSLSTG-LDPKLEQTIPFGVAFHHAGLTTEER 505
Query: 255 RLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGRDFISLNMYKQMVGRAGRTG 314
LI AY G L++ T +LAAG+NLPA+RVI+ + +GRD + M +QM GRAGR G
Sbjct: 506 ELIANAYDQGVLKVCVATCSLAAGINLPARRVILHGARMGRDLVGPAMLRQMRGRAGRKG 565
Query: 315 LQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHM--DPPTLVDLILEVVAANLCSSLED 372
E GE+ + C+ D +M+A +SS + D + +LE++A L +S E
Sbjct: 566 KDEVGETYLCCRR-SDLDAVVDLMHAELPQVSSCLISDKRRIQRALLEIIAIGLATSRES 624
Query: 373 VKTLIKHTLFYQLKSPEDQQTFLETTLSEIVASLLASKGTMLTMNEAGHLSLTSIAKAAV 432
+ + TL P Q +E +++E+ + +T++E G T + KA V
Sbjct: 625 LDDYVSRTLLAYSTEPRSIQEHVEASIAEL------QEMQFVTVDEYGSFEATRLGKAIV 678
Query: 433 QAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEYRIPSDGILLSRSKVYDRYTK 492
+ L + + I+ +L F + +H+L+ P+ G++++ ++ +
Sbjct: 679 ASSLDPEDGIFIHDELKRALQAFVMDGDMHVLYHFTPVH---DLGGVMVNWKAFWNEIQQ 735
Query: 493 FHPQTLRVAEALG----VTENLVALNVTGKLKDEKKALL---CRFFHACILYDVLNFDNH 545
LRV LG V +N++ + + E+K + RF+ A L D+ N
Sbjct: 736 LDDSGLRVMHLLGLKPVVVDNMLRGGILRESTAEEKEMARRYRRFYLALQLRDLCNEMPI 795
Query: 546 QKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELW-CYKQLLTDLPQTLMYCRAPN 604
+VA+ Y + +QN FA+ + +FCE + W L + L +
Sbjct: 796 HRVAEKYDMPRGSIQNLAQTCQGFAAGMIKFCEMMG--WGAMAAALDHFSERLNAGARAD 853
Query: 605 LRALMDLPGVKIGRARQLLNAGYSSLELIARADAKEMV 642
L AL + VK AR + G+ ++ +A A +E++
Sbjct: 854 LLALSKITFVKSRTARIFWDNGFKTIAAVANAHPEELL 891
>gi|32306445|gb|AAN39838.1| DNA polymerase Q [Mus musculus]
Length = 2587
Score = 236 bits (601), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 199/716 (27%), Positives = 344/716 (48%), Gaps = 92/716 (12%)
Query: 13 AEEFKFYLE--------EYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRID 64
A+E K YL+ + G G PT Q + I +CTIE+ + L+ LI+EN++D
Sbjct: 192 AKEKKCYLQSLFQEVGLKVDGYMGSTSPTG-QFSSLDIAVCTIERANGLVNRLIEENKMD 250
Query: 65 EIGLIVIDEFHMLNEPQRGPILECVVSKVLY---------------LKKSIQIFAMSATI 109
+G++V+DE HML + RG +LE +++K+ Y L ++QI MSAT+
Sbjct: 251 LLGMVVVDELHMLGDSHRGYLLELLLTKICYVTRKSASHQAESASTLSNAVQIVGMSATL 310
Query: 110 GNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSF-----DGKSLTEIYADNLDYSL 164
N+ +++++ Y + RP E + + ++ S + + L ++ D
Sbjct: 311 PNLQLVASWLNAELYHTDFRPVPLLESIKIGNSIYDSSMKLVREFQPLLQVKGDE----- 365
Query: 165 TGSGPDAVLHL----VQGNLMVLIFCSSKIACSNLA---------LRLQFDRFPGTKEYK 211
D ++ L +Q N VLIFC SK C +A L Q + + E+
Sbjct: 366 -----DHIVSLCYETIQDNHSVLIFCPSKKWCEKVADIIAREFYNLHHQPEGLVKSSEFP 420
Query: 212 KQ--EKEDLIEALKE--ENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQ 267
+++ L+E + + + L + L+ + +GVA+HHA LT ER +IE A+ G ++
Sbjct: 421 PVILDQKSLLEVMDQLKRSPSGLDSVLKNTVPWGVAFHHAGLTFEERDIIEGAFRQGFIR 480
Query: 268 IICCTSTLAAGVNLPAQRVIIRDSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKT 327
++ TSTL++GVNLPA+RVIIR + + YKQMVGRAGR G+ GESI++CK
Sbjct: 481 VLAATSTLSSGVNLPARRVIIRTPIFSGQPLDILTYKQMVGRAGRKGVDTMGESILVCKN 540
Query: 328 MQDFLRFSSMMNAGPEPISSHMD-----PPTLVDLILEVVAANLCSSLEDVKTLIKHTLF 382
+ + +++ EP+ S + +++ ILE++ + S+ +D++T T F
Sbjct: 541 SEKS-KGIALLQGSLEPVHSCLQRQGEVTASMIRAILEIIVGGVASTSQDMQTYAACT-F 598
Query: 383 YQLKSPEDQQTFLET-------TLSEIVASLLASKGTMLTMNEAGHLS------LTSIAK 429
E +Q + V LL ++ + + E G + T +
Sbjct: 599 LAAAIQEGKQGMQRNQDDAQLGAIDACVTWLLENE--FIQVAEPGDGTGGKVYHPTHLGS 656
Query: 430 AAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEYRIPSDGILLSRSKVYDR 489
A + + LS L I++DL F L N LH+++LV P + D I + + +
Sbjct: 657 ATLSSSLSPTDTLDIFADLQRAMKGFVLENDLHIVYLVTP----VFEDWISIDWYRFFCL 712
Query: 490 YTKFHPQTLRVAEALGVTENLVALNVTGKL--KDEKK----ALLCRFFHACILYDVLNFD 543
+ K RVAE +GV E +A V GK+ + E++ A+ RFF + +L D+++
Sbjct: 713 WEKLPTSMKRVAELVGVEEGFLARCVKGKVVARTERQHRQMAIHKRFFTSLVLLDLISEI 772
Query: 544 NHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELWCYKQ-LLTDLPQTLMYCRA 602
+ + + YG +Q+ + +A + F L W + LL+ + L +
Sbjct: 773 PLKDINQKYGCNRGQIQSLQQSAAVYAGMITVFSNRLG--WHNMELLLSQFQKRLTFGIQ 830
Query: 603 PNLRALMDLPGVKIGRARQLLNAGYSSLELIARADAKEM-VAKIRHLPLRSARNLI 657
L L+ + + RAR L +G+ ++ +ARAD+ E+ VA LP +SAR +
Sbjct: 831 RELCDLIRVSLLNAQRARFLYASGFLTVADLARADSAEVEVALKNSLPFKSARKAV 886
>gi|194742333|ref|XP_001953657.1| GF17871 [Drosophila ananassae]
gi|190626694|gb|EDV42218.1| GF17871 [Drosophila ananassae]
Length = 2135
Score = 235 bits (600), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 191/675 (28%), Positives = 327/675 (48%), Gaps = 70/675 (10%)
Query: 15 EFKFYLEEY---AGVK------GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDE 65
E FYL++ AG + G PP + ICTIEK + ++ L++++++D
Sbjct: 325 EKMFYLQDLLVPAGYRVEGFFGGYNPPGG--FENIDVAICTIEKANSIVNKLLEQDKLDS 382
Query: 66 IGLIVIDEFHMLNEPQRGPILECVVSKVLYLKK----SIQIFAMSATIGNINALSTFIEG 121
IG +V+DE H++++ RG ILE +++K+LY+ + IQ+ MSAT+ N+ L +++
Sbjct: 383 IGTVVVDEVHLISDKGRGYILELLLAKILYMSRRKSLQIQVITMSATLANVQLLQRWLDA 442
Query: 122 ITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLM 181
Y+ + RP E + V +VF + + + ++ + G+ D V L L+
Sbjct: 443 ELYITDYRPVALKEMIKVGTKVFDN-QLQYVRDVSQQSELQQALGNDSDHVAQLCIETLL 501
Query: 182 ----VLIFCSSKIACSNLAL------------------RLQFDRFPGTKEYKKQEKEDLI 219
V++FC SK C NLA+ RL+ + P E KQ+ D+
Sbjct: 502 EGCSVIVFCPSKDWCENLAVQLATAMHALIKSGSDLGRRLRSNLSPEALENVKQQLRDIP 561
Query: 220 EALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGV 279
L D +S + + A+HHA LT ER ++E A+ +G L+++ TSTL++GV
Sbjct: 562 TGL----DAVMS----KAVTCACAFHHAGLTTEERDIVETAFKSGALKVLVATSTLSSGV 613
Query: 280 NLPAQRVIIRDSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMN 339
NLPA+RV+IR G +S Y+QM+GRAGRTG GESI++C T + ++
Sbjct: 614 NLPARRVLIRSPLFGGKQMSSLTYRQMIGRAGRTGKDTLGESILIC-TESNARIGRELVT 672
Query: 340 AGPEPISS--HMDPPT-LVDLILEVVAANLCSSLEDVKTLIKHTLFYQLKS------PED 390
A +PISS MD T L +LEV+++ + ++ +D+ + TL K+ P
Sbjct: 673 AQLQPISSCLEMDGSTHLKRALLEVISSGVATTRQDIDRFVNCTLLSAQKAMKNDENPVA 732
Query: 391 QQTFLETTLSEIVASLLASKGTMLTMNEAGHLS---LTSIAKAAVQAGLSHDVCLIIYSD 447
+ +++ + L+ + L +E S T + A + + + L+++++
Sbjct: 733 DEESDSNYINDALDFLIEYEFIRLQTDEETETSAYVATRLGAACLASSMPPTDGLLLFAE 792
Query: 448 LLHNKLNFCLLNSLHMLFLVIPLE--YRIPSDGILLSRSKVYDRYTKFHPQTLRVAEALG 505
L ++ F L + LH ++LV P Y++ L+ D + K +P +V E +G
Sbjct: 793 LQKSRRCFVLESELHAVYLVTPYTVCYQLQDLDWLI----YLDMWEKLNPAMKKVGELVG 848
Query: 506 VTENLVALNVTGKLKDEKKALLC--RFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFL 563
V E+ + + G+ + K + RF+ A L +++N V + LQ
Sbjct: 849 VKESFLVKAMRGQTNLDYKQMQVHKRFYTALALQELVNETPINVVVHKFKCHRGMLQTLQ 908
Query: 564 NVTSYFASKVYRFCEELPELWCYKQLL-TDLPQTLMYCRAPNLRALMDLPGVKIGRARQL 622
+ S FA V FC L W L+ ++ L + +L LM LP + RAR L
Sbjct: 909 QMASTFAGIVTAFCTSLQ--WSTLALIVSEFRDRLYFGIHSDLIDLMRLPDLTQKRARAL 966
Query: 623 LNAGYSSLELIARAD 637
+AG+ +L +A AD
Sbjct: 967 FDAGFKNLVQLAGAD 981
>gi|357617715|gb|EHJ70955.1| putative DNA polymerase theta [Danaus plexippus]
Length = 1279
Score = 235 bits (599), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 193/655 (29%), Positives = 308/655 (47%), Gaps = 42/655 (6%)
Query: 15 EFKFYLEEYAGVKG---------QYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDE 65
E FYL++ G Q PP L I ICTIEK + LI L+ E I E
Sbjct: 62 EKMFYLQDILSSSGIRVEGFMGSQTPPGG--LQAVHIAICTIEKANSLINKLLDEGNISE 119
Query: 66 IGLIVIDEFHMLNEPQRGPILECVVSKVLYLKK-----SIQIFAMSATIGNINALSTFIE 120
+G +V+DE H+L +P RG ILE +++K+ Y SIQI MSAT+ N+ L+ ++E
Sbjct: 120 LGAVVVDELHLLGDPHRGYILELLLTKIKYTASKLNDLSIQIIGMSATLPNLKMLADWLE 179
Query: 121 GITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNL 180
++ RP E V + + G+ + + NL S L ++ +
Sbjct: 180 AHLFITEFRPIPLIESCLVGDKYYNK-KGEHIGMLCKSNLKEIDDDSVLLICLETIKSSC 238
Query: 181 MVLIFCSSKIACSNLALRLQFDRFP--------GTKEYKKQEKEDLIEALKEENDGKLST 232
VLIFC +K C NLA + F G ++ + ++E L++ +
Sbjct: 239 SVLIFCMTKNRCENLAQSIASSFFKLGCMNNEQGMILREQLKTSSILEVLEQLKGCPVGL 298
Query: 233 N--LEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRD 290
+ L+ I +GVAYHHA LT ER +IE A+ +G ++++ TSTL++GVNLPA++VIIR
Sbjct: 299 DPVLKNIISFGVAYHHAGLTFDERDIIEGAFKSGAVRVLVATSTLSSGVNLPARKVIIRC 358
Query: 291 SYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMD 350
+ I++ YKQMVGRAGR G GESI++C + + F MM +P+ S ++
Sbjct: 359 PMFQKQPINILTYKQMVGRAGRMGKDTKGESILICTPNEQKIGFDLMM-GDLDPVKSCIE 417
Query: 351 PP-TLVDLILEVVAANLCSSLEDVKTLIKHTLFYQLKSPEDQQTF-LETTLSEIVASLLA 408
+ +LE++A+ + E + K TL + +S Q F L TL E+V L
Sbjct: 418 TEDKFMRAVLEMIASQDVCTEEQLDLYSKSTLLFSQQSLHPSQNFLLNDTLKELVNYELV 477
Query: 409 SKGTMLTMNEAGHLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVI 468
+ E TS+ KA + + +S + + ++ +L + L LH+++LV
Sbjct: 478 R---IQKDGEEIRYVATSLGKACLSSSMSPNDGISLFCELQKARQCLVLETDLHLIYLVT 534
Query: 469 PLEYRIPSDGILLSRSKVYDRYTKFHPQTLRVAEALGVTENLVALNVTGKLKDEKKALLC 528
P Y + + + + + RV E +GV E+ + + G K+
Sbjct: 535 P--YSVSNQWNNIDWLHLLTLWESLTSAMKRVGELVGVQESFIIRCLRGTNKNNNNQNKL 592
Query: 529 ----RFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELW 584
RF+ A L D++N +VA + LQ ++ FA V FC +L W
Sbjct: 593 NIHKRFYTALALQDLVNEVPLSEVAGKFQCARGFLQGLQQASATFAGMVTSFCHQLG--W 650
Query: 585 -CYKQLLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIARADA 638
+ +++ L + L LM L + RAR L NAG+ ++ IA A+
Sbjct: 651 KNMEMIISQFQDRLHFGIHSELLELMKLSSLNGVRARTLFNAGFETVASIASAEV 705
>gi|30387615|ref|NP_084253.1| DNA polymerase theta isoform 1 [Mus musculus]
gi|29825886|gb|AAL77225.1| DNA polymerase theta [Mus musculus]
gi|148665535|gb|EDK97951.1| polymerase (DNA directed), theta, isoform CRA_a [Mus musculus]
gi|187953885|gb|AAI38361.1| Polymerase (DNA directed), theta [Mus musculus]
gi|187956948|gb|AAI57901.1| Polymerase (DNA directed), theta [Mus musculus]
Length = 2544
Score = 235 bits (599), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 199/716 (27%), Positives = 344/716 (48%), Gaps = 92/716 (12%)
Query: 13 AEEFKFYLE--------EYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRID 64
A+E K YL+ + G G PT Q + I +CTIE+ + L+ LI+EN++D
Sbjct: 149 AKEKKCYLQSLFQEVGLKVDGYMGSTSPTG-QFSSLDIAVCTIERANGLVNRLIEENKMD 207
Query: 65 EIGLIVIDEFHMLNEPQRGPILECVVSKVLY---------------LKKSIQIFAMSATI 109
+G++V+DE HML + RG +LE +++K+ Y L ++QI MSAT+
Sbjct: 208 LLGMVVVDELHMLGDSHRGYLLELLLTKICYVTRKSASHQAESASTLSNAVQIVGMSATL 267
Query: 110 GNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSF-----DGKSLTEIYADNLDYSL 164
N+ +++++ Y + RP E + + ++ S + + L ++ D
Sbjct: 268 PNLQLVASWLNAELYHTDFRPVPLLESIKIGNSIYDSSMKLVREFQPLLQVKGDE----- 322
Query: 165 TGSGPDAVLHL----VQGNLMVLIFCSSKIACSNLA---------LRLQFDRFPGTKEYK 211
D ++ L +Q N VLIFC SK C +A L Q + + E+
Sbjct: 323 -----DHIVSLCYETIQDNHSVLIFCPSKKWCEKVADIIAREFYNLHHQPEGLVKSSEFP 377
Query: 212 KQ--EKEDLIEALKE--ENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQ 267
+++ L+E + + + L + L+ + +GVA+HHA LT ER +IE A+ G ++
Sbjct: 378 PVILDQKSLLEVMDQLKRSPSGLDSVLKNTVPWGVAFHHAGLTFEERDIIEGAFRQGFIR 437
Query: 268 IICCTSTLAAGVNLPAQRVIIRDSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKT 327
++ TSTL++GVNLPA+RVIIR + + YKQMVGRAGR G+ GESI++CK
Sbjct: 438 VLAATSTLSSGVNLPARRVIIRTPIFSGQPLDILTYKQMVGRAGRKGVDTMGESILVCKN 497
Query: 328 MQDFLRFSSMMNAGPEPISSHMD-----PPTLVDLILEVVAANLCSSLEDVKTLIKHTLF 382
+ + +++ EP+ S + +++ ILE++ + S+ +D++T T F
Sbjct: 498 SEKS-KGIALLQGSLEPVHSCLQRQGEVTASMIRAILEIIVGGVASTSQDMQTYAACT-F 555
Query: 383 YQLKSPEDQQTFLET-------TLSEIVASLLASKGTMLTMNEAGHLS------LTSIAK 429
E +Q + V LL ++ + + E G + T +
Sbjct: 556 LAAAIQEGKQGMQRNQDDAQLGAIDACVTWLLENE--FIQVAEPGDGTGGKVYHPTHLGS 613
Query: 430 AAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEYRIPSDGILLSRSKVYDR 489
A + + LS L I++DL F L N LH+++LV P + D I + + +
Sbjct: 614 ATLSSSLSPTDTLDIFADLQRAMKGFVLENDLHIVYLVTP----VFEDWISIDWYRFFCL 669
Query: 490 YTKFHPQTLRVAEALGVTENLVALNVTGKL--KDEKK----ALLCRFFHACILYDVLNFD 543
+ K RVAE +GV E +A V GK+ + E++ A+ RFF + +L D+++
Sbjct: 670 WEKLPTSMKRVAELVGVEEGFLARCVKGKVVARTERQHRQMAIHKRFFTSLVLLDLISEI 729
Query: 544 NHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELWCYKQ-LLTDLPQTLMYCRA 602
+ + + YG +Q+ + +A + F L W + LL+ + L +
Sbjct: 730 PLKDINQKYGCNRGQIQSLQQSAAVYAGMITVFSNRLG--WHNMELLLSQFQKRLTFGIQ 787
Query: 603 PNLRALMDLPGVKIGRARQLLNAGYSSLELIARADAKEM-VAKIRHLPLRSARNLI 657
L L+ + + RAR L +G+ ++ +ARAD+ E+ VA LP +SAR +
Sbjct: 788 RELCDLIRVSLLNAQRARFLYASGFLTVADLARADSAEVEVALKNSLPFKSARKAV 843
>gi|334329765|ref|XP_003341262.1| PREDICTED: LOW QUALITY PROTEIN: DNA polymerase theta-like
[Monodelphis domestica]
Length = 2581
Score = 235 bits (599), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 196/718 (27%), Positives = 343/718 (47%), Gaps = 90/718 (12%)
Query: 13 AEEFKFYLEE--------YAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRID 64
A+E K+YL+ G G PT R + I +CTIE+ + L+ LI+EN++D
Sbjct: 166 AKEKKYYLQNLFQEVGLLVEGYMGSCSPTVR-FSALDIAVCTIERANGLVNRLIEENKMD 224
Query: 65 EIGLIVIDEFHMLNEPQRGPILECVVSKVLYL---------------KKSIQIFAMSATI 109
+G++V+DE HML + RG +LE +++KV Y+ K IQI MSAT+
Sbjct: 225 LLGMVVVDELHMLGDAHRGYLLELLLTKVRYVTQRAAASPENLTSDFSKDIQIVGMSATL 284
Query: 110 GNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSF-----DGKSLTEIYADNLDYSL 164
N++ +++++ Y + RP E + + ++ S + + + ++ D D+ +
Sbjct: 285 PNLDLVASWLNAELYHTDFRPVPLVESLKIGNSIYDSSMKLVREFQPMLQVKGDE-DHIV 343
Query: 165 TGSGPDAVLHLVQGNLMVLIFCSSKIACSNLA---------LRLQFDRFPGTKEY----- 210
+ +++ VLIFC SK C LA L+ Q + E
Sbjct: 344 S-----LCYEIIRDGYSVLIFCXSKNWCEKLANIIAHEFCDLQRQAEALAKPPELHPIAL 398
Query: 211 KKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIIC 270
+ ++++ LK G L + L++ + +GVA+HHA LT ER +IE A+ G L+++
Sbjct: 399 DHKGLAEVVDQLKRLPSG-LDSVLQQTVPWGVAFHHAGLTFEERDIIEGAFRQGLLRVLA 457
Query: 271 CTSTLAAGVNLPAQRVIIRDSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQD 330
TSTL++GVNLPA+RVIIR + + YKQM GRAGR G+ GESI++CK +
Sbjct: 458 ATSTLSSGVNLPARRVIIRTPVFNGQCLDILTYKQMAGRAGRKGVDTIGESILVCKKSEK 517
Query: 331 FLRFSSMMNAGPEPISSHMD-------PPTLVDLILEVVAANLCSSLEDVKTLIKHTLFY 383
+ S++ +P+ S + +++ ILE++ + ++ +DV+ T
Sbjct: 518 S-KGISLLQGSLKPVCSSLQRREGGETTASMIRAILEIIVGGVANTPKDVQIYASCTFLA 576
Query: 384 --------------QLKSPEDQQTFLETTLSEIVAS--LLASKGTMLTMNEAGHLSLTSI 427
+ K ++Q +E + ++ + + S+ T + H T +
Sbjct: 577 ASLKMEKQKSLKGEKQKIRQEQHGAIEACVMWLLENEFIQVSEANGETKEKVYH--PTHL 634
Query: 428 AKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEYRIPSDGILLSRSKVY 487
A + + LS L I++DL F L N LH+++LV PL D + + +
Sbjct: 635 GSATLSSSLSPTEALDIFADLQRAMKGFVLENDLHIVYLVTPLY----EDWTAIDWYRFF 690
Query: 488 DRYTKFHPQTLRVAEALGVTENLVALNVTGKL--KDEKK----ALLCRFFHACILYDVLN 541
+ K RVAE +G+ E +A +V G++ K EK+ A+ RFF + +L D+++
Sbjct: 691 CLWEKLPVSLKRVAELVGIEEGFLARSVKGRIVAKTEKQHRQMAIHKRFFTSLVLLDLIS 750
Query: 542 FDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELW-CYKQLLTDLPQTLMYC 600
+ + + YG +Q+ + +A + F L W +QLL+ + L +
Sbjct: 751 EVPLKDIIQKYGCSRGQIQSLQQSAATYAGMITVFSNRLG--WHNMEQLLSQFQKRLTFG 808
Query: 601 RAPNLRALMDLPGVKIGRARQLLNAGYSSLELIARADAKEMVAKIR-HLPLRSARNLI 657
L L+ + + RAR L AG+ ++ +AR A E+ A ++ LP RS R +
Sbjct: 809 VQRELCDLVRVSLLNAQRARALYAAGFVTVADLARGRAAEVEAVLKSSLPFRSVRRAV 866
>gi|119879523|ref|XP_615375.3| PREDICTED: DNA polymerase theta [Bos taurus]
gi|297470916|ref|XP_002684835.1| PREDICTED: DNA polymerase theta [Bos taurus]
gi|296491393|tpg|DAA33456.1| TPA: polymerase (DNA directed), theta-like [Bos taurus]
Length = 2593
Score = 235 bits (599), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 198/718 (27%), Positives = 342/718 (47%), Gaps = 100/718 (13%)
Query: 13 AEEFKFYLE---EYAGVK-----GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRID 64
A+E K+YL+ + G+K G PT R + I +CTIE+ + LI LI+EN++D
Sbjct: 156 AKEKKYYLQSLFQEVGIKVDGYMGSTSPT-RHFSSLDIAVCTIERANGLINRLIEENKMD 214
Query: 65 EIGLIVIDEFHMLNEPQRGPILECVVSKVLY---------------LKKSIQIFAMSATI 109
+G++V+DE HML + RG +LE +++K+ Y L ++QI MSAT+
Sbjct: 215 LLGMVVVDELHMLGDSHRGYLLELLLTKICYITQKSASCQADLAIPLSNAVQIVGMSATL 274
Query: 110 GNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSF-----DGKSLTEIYADNLDYSL 164
N+ +++++ Y + RP E + + ++ S + + + ++ D
Sbjct: 275 PNLELVASWLNAELYHTDFRPVPLLESIKIGNSIYDSSMKLVREFQPMLQVKGDE----- 329
Query: 165 TGSGPDAVLHL----VQGNLMVLIFCSSKIACSNLA---------LRLQFDRFPGTKEYK 211
D V+ L V+ N VL+FC SK C LA L Q + + E
Sbjct: 330 -----DHVVSLCYETVRDNHSVLLFCPSKKWCEKLADIIAREFYSLHHQAEGLVRSSELP 384
Query: 212 KQ--EKEDLIEALKE--ENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQ 267
E++ L+E + + + L + L++ + +GVA+HHA LT ER +IE A+ G ++
Sbjct: 385 PVMLEQKGLLEVMDQLKRSPSGLDSVLQKTVPWGVAFHHAGLTFEERDIIEGAFRQGQIR 444
Query: 268 IICCTSTLAAGVNLPAQRVIIRDSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKT 327
++ TSTL++GVNLPA+RVIIR + + YKQMVGRAGR G+ GESI++CK
Sbjct: 445 VLAATSTLSSGVNLPARRVIIRTPIFSGRLLDILTYKQMVGRAGRKGVDTVGESILVCKN 504
Query: 328 MQDFLRFSSMMNAGPEPISSHMD-------PPTLVDLILEVVAANLCSSLEDVKTLIKHT 380
+ + +++ +P+ S + +++ ILE++ + S+ +D++T T
Sbjct: 505 SEKS-KGITLLQGSLKPVHSCLQRHEGEEVTSSMIRAILEIIVGGVASTSQDIQTYASCT 563
Query: 381 LFYQLKSPEDQQTFLETTLS----------------EIVASLLASKGTMLTMNEAGHLSL 424
F E +Q + S E + AS GT + HL
Sbjct: 564 -FLAASMKEGKQGIQKNKDSVQLGAIEACVMWLLENEFIQITEASDGTEGNVYHPTHL-- 620
Query: 425 TSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEYRIPSDGILLSRS 484
A + + LS L I++DL F L N LH+++LV P + D +
Sbjct: 621 ---GSATLSSSLSPIDTLDIFADLQRAMKGFVLENDLHIVYLVTP----VFEDWTTIDWY 673
Query: 485 KVYDRYTKFHPQTLRVAEALGVTENLVALNVTGKL--KDEKK----ALLCRFFHACILYD 538
+ + + K RVAE +GV E +A V G L + E++ A+ RFF + +L D
Sbjct: 674 RFFCLWEKLPASMKRVAELVGVEEGFLARCVKGNLVARTERQHRQMAIHKRFFTSLVLLD 733
Query: 539 VLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELWCYKQ-LLTDLPQTL 597
+++ +++ + YG +Q+ + +A + F L W + LL+ + L
Sbjct: 734 LISEVPLKEINQKYGCNRGQIQSLQQSAAVYAGMITVFSNRLG--WHNMELLLSQFQKRL 791
Query: 598 MYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIARADAKEMVAKIRH-LPLRSAR 654
+ L L+ + + RAR L +G+ ++ +ARAD E+ + +++ P +S R
Sbjct: 792 TFGIQRELCDLVRVSLLNAQRARFLYASGFLTVSDLARADVAEVESVLKNAAPFKSTR 849
>gi|410970532|ref|XP_003991733.1| PREDICTED: DNA polymerase theta [Felis catus]
Length = 2597
Score = 234 bits (598), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 196/707 (27%), Positives = 339/707 (47%), Gaps = 78/707 (11%)
Query: 13 AEEFKFYLEE--------YAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRID 64
A+E K+YL+ G G PT+R + I +CTIE+ + LI LI+EN++D
Sbjct: 156 AKEKKYYLQSLFQEVGINVDGYMGSASPTRR-FSSLDIAVCTIERANGLINRLIEENKMD 214
Query: 65 EIGLIVIDEFHMLNEPQRGPILECVVSKVLY---------------LKKSIQIFAMSATI 109
+G++V+DE HML + RG +LE +++K+ Y L ++QI MSAT+
Sbjct: 215 LLGMVVVDELHMLGDSHRGYLLELLLTKICYITHKSASCQTDLASPLSNAVQIVGMSATL 274
Query: 110 GNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGP 169
N+ +++++ Y N RP E V + ++ S S+ + + G
Sbjct: 275 PNLELVASWLNAELYHTNFRPVPLLESVKIGNSIYDS----SMKLVREFQPSLQVKGD-E 329
Query: 170 DAVLHL----VQGNLMVLIFCSSKIACSNLA---------LRLQFDRFPGTKEYKKQ--E 214
D V+ L + N VL+FC SK C LA L Q + + E E
Sbjct: 330 DHVVSLCYETICDNHSVLLFCPSKKWCEKLADIIAREFYNLHHQAEGLVRSSELPPVVLE 389
Query: 215 KEDLIEALKE--ENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCT 272
++ L+E + + + L + L++ I +GVA+HHA LT ER +IE A+ G ++++ T
Sbjct: 390 QKSLLEVMDQLKRSPSGLDSVLQKTIPWGVAFHHAGLTFEERDIIEGAFRQGQIRVLAAT 449
Query: 273 STLAAGVNLPAQRVIIRDSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFL 332
STL++GVNLPA+RVIIR + + YKQMVGRAGR G+ GESI++CK +
Sbjct: 450 STLSSGVNLPARRVIIRTPIFSGRPLDILTYKQMVGRAGRKGVDTVGESILVCKNSEKS- 508
Query: 333 RFSSMMNAGPEPISSHMD-------PPTLVDLILEVVAANLCSSLEDVKTLIKHTLFY-- 383
+ +++ +P+ S + +++ ILE++ + S+ +D++T T
Sbjct: 509 KGIALLQGSLKPVRSCLQRQEGEEVTASMIRAILEIIVGGMASTSQDMQTYASCTFLAAS 568
Query: 384 ----QLKSPEDQQTFLETTLSEIVASLLASKGTMLTMNEAGH----LSLTSIAKAAVQAG 435
+L ++Q + + V LL ++ +T G T + A + +
Sbjct: 569 MRGGKLGIQKNQDSVQLGAIEACVMWLLENEFIQITEASDGTEGKVYHPTHLGSATLSSS 628
Query: 436 LSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEYRIPSDGILLSRSKVYDRYTKFHP 495
LS L I++DL F L N LH+++LV P+ D + + + + K
Sbjct: 629 LSPTDTLDIFADLQRAMKGFVLENDLHIVYLVTPMF----EDWTTIDWYRFFCLWEKLPI 684
Query: 496 QTLRVAEALGVTENLVALNVTGKL------KDEKKALLCRFFHACILYDVLNFDNHQKVA 549
RVAE +GV E +A V GK+ + + A+ RFF + +L D+++ +++
Sbjct: 685 SMKRVAELVGVEEAFLARCVKGKVVARTERQHRQMAIHKRFFTSLVLLDLISEVPLKEIN 744
Query: 550 KMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELWCYKQ-LLTDLPQTLMYCRAPNLRAL 608
+ YG +Q+ + +A + F L W + LL+ + L + L L
Sbjct: 745 QKYGCSRGQIQSLQQSAAVYAGMITVFSNRLG--WHNMELLLSQFQKRLTFGIQRELCDL 802
Query: 609 MDLPGVKIGRARQLLNAGYSSLELIARADAKEMVAKIRH-LPLRSAR 654
+ + + RAR +GY ++ +ARA+ E+ +++ +P +SAR
Sbjct: 803 VRVSLLNAQRARFFYASGYLTVADLARANIAEVETVLKNAVPFKSAR 849
>gi|395519083|ref|XP_003763681.1| PREDICTED: DNA polymerase theta [Sarcophilus harrisii]
Length = 2630
Score = 234 bits (598), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 196/716 (27%), Positives = 339/716 (47%), Gaps = 86/716 (12%)
Query: 13 AEEFKFYLEE--------YAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRID 64
A+E K+YL+ G G P R + I +CTIE+ + L+ LI+E+++D
Sbjct: 181 AKEKKYYLQNLFQEVGLLVEGYMGSCSPAVR-FSALDIAVCTIERANGLVNRLIEEDKMD 239
Query: 65 EIGLIVIDEFHMLNEPQRGPILECVVSKVLYL---------------KKSIQIFAMSATI 109
+G++V+DE HML + RG +LE +++KV Y+ K IQI MSAT+
Sbjct: 240 LLGMVVVDELHMLGDSHRGYLLELLLTKVRYVTQRAAARPENLTSDFSKDIQIIGMSATL 299
Query: 110 GNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSF-----DGKSLTEIYADNLDYSL 164
N++ +++++ Y + RP E + + ++ S + + + ++ D D+ +
Sbjct: 300 PNLDLVASWLNAELYHTDFRPVPLLESLKIGNSIYDSSMKLVREFQPMLQVKGDE-DHIV 358
Query: 165 TGSGPDAVLHLVQGNLMVLIFCSSKIACSNLA---------LRLQFDRFPGTKEYKKQEK 215
+ ++ VLIFC SK C LA L+ Q F E
Sbjct: 359 S-----LCYEIICDGYSVLIFCPSKSWCEKLANIIAHEFYDLQHQTQGFVKPPELHPVTL 413
Query: 216 E-----DLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIIC 270
+ ++++ LK G L + L++ + +GVA+HHA LT ER +IE A+ G ++I+
Sbjct: 414 DQKGLLEVVDQLKRLPSG-LDSVLQQTVPWGVAFHHAGLTFEERDIIEGAFRQGLIRILV 472
Query: 271 CTSTLAAGVNLPAQRVIIRDSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQD 330
TSTL++GVNLPA+RVIIR + + YKQMVGRAGR G+ GESI++CK M+
Sbjct: 473 ATSTLSSGVNLPARRVIIRTPVFNGKCLDILTYKQMVGRAGRKGVDTVGESILVCKKMEK 532
Query: 331 FLRFSSMMNAGPEPISSHMD-------PPTLVDLILEVVAANLCSSLEDVKTLIKHTLFY 383
+ +++ +P+ S + +++ ILE++ + ++ EDV T T
Sbjct: 533 S-KGIALLQGSLKPVCSSLQRREGGERTSSMIRAILEIIVGGVANTPEDVHTYASCTFLA 591
Query: 384 QLKSPEDQQTF----------LETTLSEIVASLLASKGTMLTMNEAG----HLSLTSIAK 429
E Q++ + + V LL ++ ++ G T +
Sbjct: 592 ASLKMEKQKSLKGDKQKMQQEQHGAIEDCVMWLLENEFIQISEANVGIKKKVYHPTHLGS 651
Query: 430 AAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEYRIPSDGILLSRSKVYDR 489
A + + LS L I++DL F L N LH+++LV PL D + + +
Sbjct: 652 ATLSSSLSPTEALDIFADLQRAMKGFVLENDLHIVYLVTPLY----EDWTAIDWYRFFCL 707
Query: 490 YTKFHPQTLRVAEALGVTENLVALNVTGKL--KDEKK----ALLCRFFHACILYDVLNFD 543
+ K RVAE +G+ E +A V G++ K E++ A+ RFF + +L D+++
Sbjct: 708 WEKLPTSLKRVAELVGIEEGFLARCVKGRIVAKTERQHRQMAIHKRFFTSLVLLDLISEV 767
Query: 544 NHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELW-CYKQLLTDLPQTLMYCRA 602
+ + + YG +Q+ + +A + F L W +QLL+ + L +
Sbjct: 768 PLKDIIQKYGCNRGQIQSLQQSAATYAGMITVFSNRLG--WHNMEQLLSQFQKRLTFGVQ 825
Query: 603 PNLRALMDLPGVKIGRARQLLNAGYSSLELIARADAKEMVAKIRH-LPLRSARNLI 657
L L+ + + RAR L AG+ ++ +AR E+ A +++ LP RS R +
Sbjct: 826 RELCDLVRVSLLNAQRARALYTAGFLTVADLARGSIAEVEAVLKNSLPFRSVRKAV 881
>gi|148665538|gb|EDK97954.1| polymerase (DNA directed), theta, isoform CRA_d [Mus musculus]
Length = 2398
Score = 234 bits (598), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 194/696 (27%), Positives = 336/696 (48%), Gaps = 84/696 (12%)
Query: 25 GVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGP 84
G G PT Q + I +CTIE+ + L+ LI+EN++D +G++V+DE HML + RG
Sbjct: 23 GYMGSTSPTG-QFSSLDIAVCTIERANGLVNRLIEENKMDLLGMVVVDELHMLGDSHRGY 81
Query: 85 ILECVVSKVLY---------------LKKSIQIFAMSATIGNINALSTFIEGITYVENSR 129
+LE +++K+ Y L ++QI MSAT+ N+ +++++ Y + R
Sbjct: 82 LLELLLTKICYVTRKSASHQAESASTLSNAVQIVGMSATLPNLQLVASWLNAELYHTDFR 141
Query: 130 PTKHSEYVTVDKRVFQSF-----DGKSLTEIYADNLDYSLTGSGPDAVLHL----VQGNL 180
P E + + ++ S + + L ++ D D ++ L +Q N
Sbjct: 142 PVPLLESIKIGNSIYDSSMKLVREFQPLLQVKGDE----------DHIVSLCYETIQDNH 191
Query: 181 MVLIFCSSKIACSNLA---------LRLQFDRFPGTKEYKKQ--EKEDLIEALKE--END 227
VLIFC SK C +A L Q + + E+ +++ L+E + + +
Sbjct: 192 SVLIFCPSKKWCEKVADIIAREFYNLHHQPEGLVKSSEFPPVILDQKSLLEVMDQLKRSP 251
Query: 228 GKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVI 287
L + L+ + +GVA+HHA LT ER +IE A+ G ++++ TSTL++GVNLPA+RVI
Sbjct: 252 SGLDSVLKNTVPWGVAFHHAGLTFEERDIIEGAFRQGFIRVLAATSTLSSGVNLPARRVI 311
Query: 288 IRDSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISS 347
IR + + YKQMVGRAGR G+ GESI++CK + + +++ EP+ S
Sbjct: 312 IRTPIFSGQPLDILTYKQMVGRAGRKGVDTMGESILVCKNSEKS-KGIALLQGSLEPVHS 370
Query: 348 HMD-----PPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQLKSPEDQQTFLET----- 397
+ +++ ILE++ + S+ +D++T T F E +Q
Sbjct: 371 CLQRQGEVTASMIRAILEIIVGGVASTSQDMQTYAACT-FLAAAIQEGKQGMQRNQDDAQ 429
Query: 398 --TLSEIVASLLASKGTMLTMNEAGHLS------LTSIAKAAVQAGLSHDVCLIIYSDLL 449
+ V LL ++ + + E G + T + A + + LS L I++DL
Sbjct: 430 LGAIDACVTWLLENE--FIQVAEPGDGTGGKVYHPTHLGSATLSSSLSPTDTLDIFADLQ 487
Query: 450 HNKLNFCLLNSLHMLFLVIPLEYRIPSDGILLSRSKVYDRYTKFHPQTLRVAEALGVTEN 509
F L N LH+++LV P + D I + + + + K RVAE +GV E
Sbjct: 488 RAMKGFVLENDLHIVYLVTP----VFEDWISIDWYRFFCLWEKLPTSMKRVAELVGVEEG 543
Query: 510 LVALNVTGKL--KDEKK----ALLCRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFL 563
+A V GK+ + E++ A+ RFF + +L D+++ + + + YG +Q+
Sbjct: 544 FLARCVKGKVVARTERQHRQMAIHKRFFTSLVLLDLISEIPLKDINQKYGCNRGQIQSLQ 603
Query: 564 NVTSYFASKVYRFCEELPELWCYKQ-LLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQL 622
+ +A + F L W + LL+ + L + L L+ + + RAR L
Sbjct: 604 QSAAVYAGMITVFSNRLG--WHNMELLLSQFQKRLTFGIQRELCDLIRVSLLNAQRARFL 661
Query: 623 LNAGYSSLELIARADAKEM-VAKIRHLPLRSARNLI 657
+G+ ++ +ARAD+ E+ VA LP +SAR +
Sbjct: 662 YASGFLTVADLARADSAEVEVALKNSLPFKSARKAV 697
>gi|296416253|ref|XP_002837795.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295633678|emb|CAZ81986.1| unnamed protein product [Tuber melanosporum]
Length = 937
Score = 234 bits (597), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 197/668 (29%), Positives = 331/668 (49%), Gaps = 34/668 (5%)
Query: 8 SLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKK--SIYICTIEKGSKLIGSLIQENRIDE 65
++ K K L ++ + G + +K ++ K + +CTIEK + L+ + I++ +++
Sbjct: 248 AVPKRGRWDKANLWKHLNIIGFHGGSKARMGWKELDVAVCTIEKANALVNAAIEDRTVNQ 307
Query: 66 IGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKS-IQIFAMSATIGNINALSTFIEGITY 124
+G++V DE HML + RG ILE + +K+L L ++ IQI MSAT+ N+ L+T+++ Y
Sbjct: 308 LGIVVFDELHMLGDDHRGYILELLATKLLCLTEANIQIVGMSATLSNVRVLATWLKAQFY 367
Query: 125 VENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHL----VQGNL 180
RP E++ D ++ S+D K + +I + + L +A++ L V+G
Sbjct: 368 ECAFRPIPLQEHLVYDNNIY-SYDEKLVAKI-SPSEPKELKDPVTNAIVSLTHEAVKGGH 425
Query: 181 MVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILY 240
VL+FC S+ C ++ RL P E ++E+ ++I L + G L LE+ +
Sbjct: 426 GVLVFCESRSRCEDVG-RLLVKFMPAVNEEIREERMEIIRDLATTSTG-LDPILEKTVPA 483
Query: 241 GVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGRDFISL 300
GVA+HHA LT ER LI EAY G +++ICCT+T+AAGVNLPA+RVII +GRDF+S
Sbjct: 484 GVAFHHAGLTTEERDLIAEAYDRGAIKVICCTATMAAGVNLPARRVII-SPRMGRDFLSP 542
Query: 301 NMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPT--LVDLI 358
M KQM GRAGR G GE+ + C+ +D ++NA I S + T L +
Sbjct: 543 TMLKQMRGRAGRKGRDTHGENYLCCRK-EDLGPVKELINAPMPSIQSCLGGETGSLKRAL 601
Query: 359 LEVVAANLCSSLEDVKTLIKHTLFYQLKSPEDQQTFLETTLSEIVASLLASKGTMLTMNE 418
LE +A L +S + + ++ TL Y +PE + L I L G +
Sbjct: 602 LEGIATKLATSDDSLSEYMRATLIYH-TTPEPLKYLKPKILDAI--EHLKQMGLISEDRI 658
Query: 419 AGHLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEYRIPSDG 478
G+ T + A V +GLS + + ++ +L +NF L + +H+++ P+ + +
Sbjct: 659 QGYFHATGVGNATVASGLSPEEGVFLHDELSRALMNFNLESDMHIVYQFTPI-HSSTTAS 717
Query: 479 ILLSRSKVYDRYTKFHPQTLRVAEALGVTENLV-ALNVTGKLKDE------KKALLCRFF 531
+ + + + K +R A +GV+ V + G L+++ K + RF+
Sbjct: 718 VNIDWKLMREEVEKLDESGIRAATFVGVSPAFVNKMAQGGTLREDSPQNISKARVYRRFY 777
Query: 532 HACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELWC-YKQLL 590
+ +L ++LN VA Y I +Q FA+ FC + W LL
Sbjct: 778 VSLMLRELLNEKPVHIVAANYNIARGFIQQLSTTCKGFATISGTFCRVMG--WTGLAVLL 835
Query: 591 TDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIARADAKEMV-----AKI 645
L +L +L +P VK AR G S+E ++ ++ + +V A+
Sbjct: 836 EHYSWRLDMGVKADLMSLARIPFVKSVTARIFHENGLKSVEAVSASNVEALVKLLELAQP 895
Query: 646 RHLPLRSA 653
+ L LR A
Sbjct: 896 KKLRLREA 903
>gi|348529422|ref|XP_003452212.1| PREDICTED: DNA polymerase theta [Oreochromis niloticus]
Length = 2407
Score = 234 bits (597), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 192/672 (28%), Positives = 333/672 (49%), Gaps = 67/672 (9%)
Query: 42 IYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLY------ 95
+ +CTIEK + LI LI+EN + +G++V+DE HM+ + RG +LE +++K+ Y
Sbjct: 354 VAVCTIEKANSLINRLIEENSMTLLGMVVVDELHMVGDSGRGYLLELLLTKIRYIAQKQN 413
Query: 96 ----LKKSIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSFDGKS 151
L + IQI MSAT+ N++ L++++ Y + RP E++ V ++ +S
Sbjct: 414 STGSLSEGIQIIGMSATLPNLSLLASWLGAELYQTDYRPVPLQEHLKVGCNIYD----QS 469
Query: 152 LTEIYADNLDYSLTGSGPDAVLHL----VQGNLMVLIFCSSKIACSNLALRLQFDRFPGT 207
L+ + + G D V+ L V+ VL+FC SK C LA + + +
Sbjct: 470 LSVVRHFTPALHVKGDD-DHVVSLCYETVREGHCVLLFCPSKNWCEKLADTIAREFYNLR 528
Query: 208 KEYKKQEKE------------DLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERR 255
++ E E D+I L+ G L L+ + +GVA+HHA LT ER
Sbjct: 529 HAERQSEAEPQPVRLDQEGLVDVIAQLRRTPAG-LDPILQRTVPWGVAFHHAGLTFDERD 587
Query: 256 LIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGRDFISLNMYKQMVGRAGRTGL 315
++E A+ G ++++ TSTL++GVNLPA+RVIIR + YKQM GRAGR G+
Sbjct: 588 VLEGAFRQGMIRVLAATSTLSSGVNLPARRVIIRTPTFNGHLLDPLTYKQMAGRAGRKGI 647
Query: 316 QESGESIMLCKTMQDFLRFSSMMNAGPEPISSHM-------DPPTLVDLILEVVAANLCS 368
+GES+++CK + + +++ +PISS + +++ ILE++ + S
Sbjct: 648 DTTGESVLVCKEAER-QKGITLLKGALQPISSCLVRREGEGVTTSMLRAILEIIVGGVAS 706
Query: 369 SLEDVK-----TLIKHTLFYQLKSPEDQQTFLETTLSEIVASLLASKGTMLTMNEAGHLS 423
+ +DV+ +L+ ++ K ++T + ++ V L+ ++ + + G+ +
Sbjct: 707 TPQDVRLYASCSLLAASMKCHGKKVSKEETS-KGSIETCVEWLMENEFINIQKDGQGNAT 765
Query: 424 L---TSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEYRIPSDGIL 480
T + A + + LS L I++DL F L N LH+L+L+ PL ++
Sbjct: 766 RYCPTQLGAATLSSSLSPPEALGIFADLQRAMKGFVLENDLHILYLITPLY----AEWTT 821
Query: 481 LSRSKVYDRYTKFHPQTLRVAEALGVTENLVALNVTGKL--KDEKK----ALLCRFFHAC 534
+ + + + + RVAE +GV E +A +V+GKL K EK+ A+ RFF
Sbjct: 822 IDWYQFFCLWEQLSSSMKRVAELVGVQEGFLARSVSGKLVAKTEKQHRQMAIHKRFFTTL 881
Query: 535 ILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELWCYKQLLTDLP 594
+L D++N VA Y LQ+ S +A V FC+ L W +LL
Sbjct: 882 VLQDLVNEVPLGTVANKYNCSRGQLQSLQQSASTYAGMVTVFCKRLG--WHNMELLLSQY 939
Query: 595 QTLMYCRAPNLRALMDLPGVKI---GRARQLLNAGYSSLELIARADAKEMVAKIRH-LPL 650
QT + R L+DL V + RAR L G ++ +ARA ++ +R+ +P
Sbjct: 940 QTRLSFGV--QRELVDLVRVSLLNATRARALYAQGLCTVAELARATVADVEKALRNAIPF 997
Query: 651 RSARNLISAAKL 662
+S++ + +++
Sbjct: 998 KSSKRAVDESEV 1009
>gi|291243319|ref|XP_002741550.1| PREDICTED: mutagen-sensitive 308-like [Saccoglossus kowalevskii]
Length = 1230
Score = 234 bits (597), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 209/713 (29%), Positives = 326/713 (45%), Gaps = 113/713 (15%)
Query: 13 AEEFKFYLE---EYAGVK-----GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRID 64
A E FYL+ E GV+ G P + +CTIEK + LI L++EN+++
Sbjct: 527 AREKMFYLQRMFEECGVRVEGYMGNMSPAG-GFASLDVAVCTIEKANSLINRLLEENKLN 585
Query: 65 EIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKS------------------------- 99
++G IV+DE HM+ + RG +LE +++K+ Y+
Sbjct: 586 QLGAIVVDELHMVGDSHRGYLLELLLTKIRYVSSKVVQKKEDTGTNGDKGDSRILSNTNP 645
Query: 100 IQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADN 159
IQI MSAT+ N++ L+ +++ Y + RP E V + +++ S + K L EI
Sbjct: 646 IQIIGMSATLPNLDLLARWLDADLYKTDFRPVPLEECVKIGDKIYNS-ELKKLREISP-- 702
Query: 160 LDYSLTGSGPDA-----VLHLVQGNLMVLIFCSSKIACSNLALRLQFDRF---------- 204
++ SG D + VLIFC +K C L+ + F
Sbjct: 703 ---AVQVSGDDEHIIPLCFETITNGHSVLIFCPTKNWCEKLSEMIAKQIFKVLYSGAAVT 759
Query: 205 --------------PGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLT 250
P ++ KQ D++E LK G + + L+ + Y VAYHHA LT
Sbjct: 760 GHTTAGPVKASQLVPA--QFNKQGIIDVLEQLKRTPVG-IDSVLKRTVPYAVAYHHAGLT 816
Query: 251 AGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGRDFISLNMYKQMVGRA 310
ER +IE A+ G L+I+ TSTL++GVNLPA+RVIIR R + + YKQM GRA
Sbjct: 817 FDERDIIEGAFRQGILKILIATSTLSSGVNLPARRVIIRTPMFNRRLLDVLTYKQMSGRA 876
Query: 311 GRTGLQESGESIMLCKT---------MQDFLR--FSSMMNAGPEPISSHMDPPTLVDLIL 359
GR G+ GESI++CK+ MQ L+ S ++ E +S M IL
Sbjct: 877 GRKGVDTMGESILICKSNERSKGQHLMQTELKPVCSCLVKENGEETTSSMK-----RAIL 931
Query: 360 EVVAANLCSSLEDVKTLIKHTLF-YQLKSPEDQQTFLETTLSEIVASLLASKGTMLTMNE 418
EV+ + + +S DV TL L + E F ++ + L+ ++ L +
Sbjct: 932 EVIVSGVATSPSDVDKYASCTLLAASLTTSESTSNF--GSIQNCIKFLVDNEFIRLHQVK 989
Query: 419 AGHLS-----LTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEYR 473
G S T + A + + LS D L+++S+L + +F L N LH+L+ V P
Sbjct: 990 NGAESSDKYVATQLGSATLSSSLSPDEALVVFSELQRARKSFVLENELHILYQVTP---- 1045
Query: 474 IPSDGILLSRSKVYDRYTKFHPQTLRVAEALGVTENLVALNVTGKL-----KDEKK-ALL 527
I GI+ + D + RV E +G+ E +A V G + K ++ A+
Sbjct: 1046 IYDQGIVNDWYRYIDIWETLSIDKKRVGELVGIEERFLARAVGGSISTSTFKQQRVLAIH 1105
Query: 528 CRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELWCYK 587
RF+ A IL D++N +V++ Y + LQ+ + F+ V FC L W
Sbjct: 1106 KRFYTAMILEDLVNEIPIAEVSRKYSVPKGQLQSLQQSAATFSGMVTVFCSRLG--WINL 1163
Query: 588 QLLTDLPQTLMYCRAPNLRALMDLPGVKI---GRARQLLNAGYSSLELIARAD 637
++L + Q + R L DL + + RAR L N GY ++ IA+AD
Sbjct: 1164 EILLEQFQNRLNFGVQ--RELCDLVRISLLNGQRARILYNGGYHTIANIAQAD 1214
>gi|195113811|ref|XP_002001461.1| GI21961 [Drosophila mojavensis]
gi|193918055|gb|EDW16922.1| GI21961 [Drosophila mojavensis]
Length = 2181
Score = 234 bits (597), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 193/670 (28%), Positives = 328/670 (48%), Gaps = 62/670 (9%)
Query: 15 EFKFYLEE--------YAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEI 66
E FYL++ G G Y P ++ ICTIEK + ++ L+++ +++++
Sbjct: 350 EKMFYLQDLLTPAGYRVEGFFGGYSPPG-GFESINVAICTIEKANSIVNKLLEQRKLEDL 408
Query: 67 GLIVIDEFHMLNEPQRGPILECVVSKVLYLKKS----IQIFAMSATIGNINALSTFIEGI 122
G +V+DE H++++ RG ILE +++K+LY+ + IQ+ MSAT+ N+ L ++
Sbjct: 409 GTVVVDEVHLISDAGRGYILELLLAKILYMCRKQALHIQLITMSATLANVQLLQQWLNAE 468
Query: 123 TYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLM- 181
Y+ + RP E + V +++ + L + D + D V L L+
Sbjct: 469 LYITDFRPVALKEMIKVGSKIYD--NQLKLLRDLSRTADVPALPNDGDHVAQLCIETLLE 526
Query: 182 ---VLIFCSSKIACSNLALRL--------QFDRFPGTK---EYKKQEKEDLIEALKEEND 227
V++FC SK C NLA++L + + G + + +Q +++ + L++
Sbjct: 527 GCSVVVFCPSKDWCENLAVQLATAMHTLIKSESDVGKRLRAQLNQQAIDEVKQQLRDIPT 586
Query: 228 GKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVI 287
G L + + + I Y A+HHA LT ER ++E ++ AG L+II TSTL++GVNLPA+RV+
Sbjct: 587 G-LDSVMSKAISYACAFHHAGLTTEERDIVEASFKAGALKIIVATSTLSSGVNLPARRVL 645
Query: 288 IRDSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISS 347
IR G +S Y+QM+GRAGRTG GESI++C T + ++ A +PISS
Sbjct: 646 IRSPLFGGKQMSSLTYRQMIGRAGRTGKDTLGESILIC-TDSNARIGRELVTAQLKPISS 704
Query: 348 HM---DPPTLVDLILEVVAANLCSSLEDVKTLIKHTLF---------YQLKSPEDQQTFL 395
+ D L +LEV+++ + S+ +D+ + TL Q + ED+ F+
Sbjct: 705 CLDLDDSTHLKRALLEVISSGVASTKQDIDSFFNCTLLSAQRKIAAAVQEEQEEDEAHFI 764
Query: 396 ETTLSEIVASLLASKGTMLTMNEAGHLS---LTSIAKAAVQAGLSHDVCLIIYSDLLHNK 452
L LL + L +E + T + A + + + L+++++L ++
Sbjct: 765 CDALD----FLLEYEFIRLQTDEETDMQNYVATRLGAACLASSMPPTDGLLLFAELQKSR 820
Query: 453 LNFCLLNSLHMLFLVIPLE--YRIPSDGILLSRSKVYDRYTKFHPQTLRVAEALGVTENL 510
F L + LH ++LV P Y++ LL D + K P +V E +GV E
Sbjct: 821 RCFVLESELHAVYLVTPYSVCYQLQDVDWLL----YLDMWEKLSPAMKKVGELVGVKEAF 876
Query: 511 VALNVTGKLKDEKKALLC--RFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSY 568
+ + G+ K + K + RF+ A L +++N VA + Q LQ+ + S
Sbjct: 877 LVRAMRGQAKLDYKLMQIHKRFYTALALQELVNETPINVVAHKFKCQRGMLQSLQQMAST 936
Query: 569 FASKVYRFCEELPELWCYKQL-LTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGY 627
FA V FC L W L ++ L + +L LM LP + RAR L +AG
Sbjct: 937 FAGIVSAFCNSLQ--WSTLALVVSQFKDRLYFGIHRDLIDLMRLPDLSHKRARALHDAGI 994
Query: 628 SSLELIARAD 637
+SL +A A+
Sbjct: 995 TSLVELASAN 1004
>gi|119599916|gb|EAW79510.1| polymerase (DNA directed), theta, isoform CRA_a [Homo sapiens]
Length = 2725
Score = 234 bits (597), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 200/719 (27%), Positives = 342/719 (47%), Gaps = 102/719 (14%)
Query: 13 AEEFKFYLE---EYAGVK-----GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRID 64
A+E K+YL+ + G+K G P+ R + I +CTIE+ + LI LI+EN++D
Sbjct: 285 AKEKKYYLQSLFQEVGIKVDGYMGSTSPS-RHFSSLDIAVCTIERANGLINRLIEENKMD 343
Query: 65 EIGLIVIDEFHMLNEPQRGPILECVVSKVLY---------------LKKSIQIFAMSATI 109
+G++V+DE HML + RG +LE +++K+ Y L ++QI MSAT+
Sbjct: 344 LLGMVVVDELHMLGDSHRGYLLELLLTKICYITRKSASCQADLASSLSNAVQIVGMSATL 403
Query: 110 GNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSF-----DGKSLTEIYADNLDYSL 164
N+ +++++ Y + RP E V V ++ S + + + ++ D
Sbjct: 404 PNLELVASWLNAELYHTDFRPVPLLESVKVGNSIYDSSMKLVREFEPMLQVKGDE----- 458
Query: 165 TGSGPDAVLHL----VQGNLMVLIFCSSKIACSNLA---------LRLQFDRFPGTKE-- 209
D V+ L + N VL+FC SK C LA L Q + E
Sbjct: 459 -----DHVVSLCYETICDNHSVLLFCPSKKWCEKLADIIAREFYNLHHQAEGLVKPSECP 513
Query: 210 ---YKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTL 266
+++E ++++ L+ G L + L++ + +GVA+HHA LT ER +IE A+ G +
Sbjct: 514 PVILEQKELLEVMDQLRRLPSG-LDSVLQKTVPWGVAFHHAGLTFEERDIIEGAFRQGLI 572
Query: 267 QIICCTSTLAAGVNLPAQRVIIRDSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCK 326
+++ TSTL++GVNLPA+RVIIR G + + YKQMVGRAGR G+ GESI++CK
Sbjct: 573 RVLAATSTLSSGVNLPARRVIIRTPIFGGRPLDILTYKQMVGRAGRKGVDTVGESILICK 632
Query: 327 TMQDFLRFSSMMNAGPEPISSHMD-------PPTLVDLILEVVAANLCSSLEDVKTLIKH 379
+ + +++ +P+ S + +++ ILE++ + S+ +D+ T
Sbjct: 633 NSEKS-KGIALLQGSLKPVRSCLQRREGEEVTGSMIRAILEIIVGGVASTSQDMHTYAAC 691
Query: 380 TLFYQLKSPEDQQTFLETTLS----------------EIVASLLASKGTMLTMNEAGHLS 423
T F E +Q S E + S AS GT + HL
Sbjct: 692 T-FLAASMKEGKQGIQRNQESVQLGAIEACVMWLLENEFIQSTEASDGTEGKVYHPTHL- 749
Query: 424 LTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEYRIPSDGILLSR 483
A + + LS L I++DL F L N LH+L+LV P+ D +
Sbjct: 750 ----GSATLSSSLSPADTLDIFADLQRAMKGFVLENDLHILYLVTPMF----EDWTTIDW 801
Query: 484 SKVYDRYTKFHPQTLRVAEALGVTENLVALNVTGKL------KDEKKALLCRFFHACILY 537
+ + + K RVAE +GV E +A V GK+ + + A+ RFF + +L
Sbjct: 802 YRFFCLWEKLPTSMKRVAELVGVEEGFLARCVKGKVVARTERQHRQMAIHKRFFTSLVLL 861
Query: 538 DVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELWCYKQ-LLTDLPQT 596
D+++ +++ + YG +Q+ + +A + F L W + LL+ +
Sbjct: 862 DLISEVPLREINQKYGCNRGQIQSLQQSAAVYAGMITVFSNRLG--WHNMELLLSQFQKR 919
Query: 597 LMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIARADAKEMVAKIRH-LPLRSAR 654
L + L L+ + + RAR L +G+ ++ +ARA+ E+ +++ +P +SAR
Sbjct: 920 LTFGIQRELCDLVRVSLLNAQRARVLYASGFHTVADLARANIVEVEVILKNAVPFKSAR 978
>gi|76364226|gb|AAR08421.2| DNA polymerase theta [Homo sapiens]
Length = 2590
Score = 234 bits (597), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 200/719 (27%), Positives = 342/719 (47%), Gaps = 102/719 (14%)
Query: 13 AEEFKFYLE---EYAGVK-----GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRID 64
A+E K+YL+ + G+K G P+ R + I +CTIE+ + LI LI+EN++D
Sbjct: 150 AKEKKYYLQSLFQEVGIKVDGYMGSTSPS-RHFSSLDIAVCTIERANGLINRLIEENKMD 208
Query: 65 EIGLIVIDEFHMLNEPQRGPILECVVSKVLY---------------LKKSIQIFAMSATI 109
+G++V+DE HML + RG +LE +++K+ Y L ++QI MSAT+
Sbjct: 209 LLGMVVVDELHMLGDSHRGYLLELLLTKICYITRKSASCQADLASSLSNAVQIVGMSATL 268
Query: 110 GNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSF-----DGKSLTEIYADNLDYSL 164
N+ +++++ Y + RP E V V ++ S + + + ++ D
Sbjct: 269 PNLELVASWLNAELYHTDFRPVPLLESVKVGNSIYDSSMKLVREFEPMLQVKGDE----- 323
Query: 165 TGSGPDAVLHL----VQGNLMVLIFCSSKIACSNLA---------LRLQFDRFPGTKE-- 209
D V+ L + N VL+FC SK C LA L Q + E
Sbjct: 324 -----DHVVSLCYETICDNHSVLLFCPSKKWCEKLADIIAREFYNLHHQAEGLVKPSECP 378
Query: 210 ---YKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTL 266
+++E ++++ L+ G L + L++ + +GVA+HHA LT ER +IE A+ G +
Sbjct: 379 PVILEQKELLEVMDQLRRLPSG-LDSVLQKTVPWGVAFHHAGLTFEERDIIEGAFRQGLI 437
Query: 267 QIICCTSTLAAGVNLPAQRVIIRDSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCK 326
+++ TSTL++GVNLPA+RVIIR G + + YKQMVGRAGR G+ GESI++CK
Sbjct: 438 RVLAATSTLSSGVNLPARRVIIRTPIFGGRPLDILTYKQMVGRAGRKGVDTVGESILICK 497
Query: 327 TMQDFLRFSSMMNAGPEPISSHMD-------PPTLVDLILEVVAANLCSSLEDVKTLIKH 379
+ + +++ +P+ S + +++ ILE++ + S+ +D+ T
Sbjct: 498 NSEKS-KGIALLQGSLKPVRSCLQRREGEEVTGSMIRAILEIIVGGVASTSQDMHTYAAC 556
Query: 380 TLFYQLKSPEDQQTFLETTLS----------------EIVASLLASKGTMLTMNEAGHLS 423
T F E +Q S E + S AS GT + HL
Sbjct: 557 T-FLAASMKEGKQGIQRNQESVQLGAIEACVMWLLENEFIQSTEASDGTEGKVYHPTHL- 614
Query: 424 LTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEYRIPSDGILLSR 483
A + + LS L I++DL F L N LH+L+LV P+ D +
Sbjct: 615 ----GSATLSSSLSPADTLDIFADLQRAMKGFVLENDLHILYLVTPMF----EDWTTIDW 666
Query: 484 SKVYDRYTKFHPQTLRVAEALGVTENLVALNVTGKL------KDEKKALLCRFFHACILY 537
+ + + K RVAE +GV E +A V GK+ + + A+ RFF + +L
Sbjct: 667 YRFFCLWEKLPTSMKRVAELVGVEEGFLARCVKGKVVARTERQHRQMAIHKRFFTSLVLL 726
Query: 538 DVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELWCYKQ-LLTDLPQT 596
D+++ +++ + YG +Q+ + +A + F L W + LL+ +
Sbjct: 727 DLISEVPLREINQKYGCNRGQIQSLQQSAAVYAGMITVFSNRLG--WHNMELLLSQFQKR 784
Query: 597 LMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIARADAKEMVAKIRH-LPLRSAR 654
L + L L+ + + RAR L +G+ ++ +ARA+ E+ +++ +P +SAR
Sbjct: 785 LTFGIQRELCDLVRVSLLNAQRARVLYASGFHTVADLARANIVEVEVILKNAVPFKSAR 843
>gi|139394648|ref|NP_955452.3| DNA polymerase theta [Homo sapiens]
gi|325511332|sp|O75417.2|DPOLQ_HUMAN RecName: Full=DNA polymerase theta; AltName: Full=DNA polymerase
eta
gi|225000062|gb|AAI72289.1| Polymerase (DNA directed), theta [synthetic construct]
Length = 2590
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 200/719 (27%), Positives = 342/719 (47%), Gaps = 102/719 (14%)
Query: 13 AEEFKFYLE---EYAGVK-----GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRID 64
A+E K+YL+ + G+K G P+ R + I +CTIE+ + LI LI+EN++D
Sbjct: 150 AKEKKYYLQSLFQEVGIKVDGYMGSTSPS-RHFSSLDIAVCTIERANGLINRLIEENKMD 208
Query: 65 EIGLIVIDEFHMLNEPQRGPILECVVSKVLY---------------LKKSIQIFAMSATI 109
+G++V+DE HML + RG +LE +++K+ Y L ++QI MSAT+
Sbjct: 209 LLGMVVVDELHMLGDSHRGYLLELLLTKICYITRKSASCQADLASSLSNAVQIVGMSATL 268
Query: 110 GNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSF-----DGKSLTEIYADNLDYSL 164
N+ +++++ Y + RP E V V ++ S + + + ++ D
Sbjct: 269 PNLELVASWLNAELYHTDFRPVPLLESVKVGNSIYDSSMKLVREFEPMLQVKGDE----- 323
Query: 165 TGSGPDAVLHL----VQGNLMVLIFCSSKIACSNLA---------LRLQFDRFPGTKE-- 209
D V+ L + N VL+FC SK C LA L Q + E
Sbjct: 324 -----DHVVSLCYETICDNHSVLLFCPSKKWCEKLADIIAREFYNLHHQAEGLVKPSECP 378
Query: 210 ---YKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTL 266
+++E ++++ L+ G L + L++ + +GVA+HHA LT ER +IE A+ G +
Sbjct: 379 PVILEQKELLEVMDQLRRLPSG-LDSVLQKTVPWGVAFHHAGLTFEERDIIEGAFRQGLI 437
Query: 267 QIICCTSTLAAGVNLPAQRVIIRDSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCK 326
+++ TSTL++GVNLPA+RVIIR G + + YKQMVGRAGR G+ GESI++CK
Sbjct: 438 RVLAATSTLSSGVNLPARRVIIRTPIFGGRPLDILTYKQMVGRAGRKGVDTVGESILICK 497
Query: 327 TMQDFLRFSSMMNAGPEPISSHMD-------PPTLVDLILEVVAANLCSSLEDVKTLIKH 379
+ + +++ +P+ S + +++ ILE++ + S+ +D+ T
Sbjct: 498 NSEKS-KGIALLQGSLKPVRSCLQRREGEEVTGSMIRAILEIIVGGVASTSQDMHTYAAC 556
Query: 380 TLFYQLKSPEDQQTFLETTLS----------------EIVASLLASKGTMLTMNEAGHLS 423
T F E +Q S E + S AS GT + HL
Sbjct: 557 T-FLAASMKEGKQGIQRNQESVQLGAIEACVMWLLENEFIQSTEASDGTEGKVYHPTHL- 614
Query: 424 LTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEYRIPSDGILLSR 483
A + + LS L I++DL F L N LH+L+LV P+ D +
Sbjct: 615 ----GSATLSSSLSPADTLDIFADLQRAMKGFVLENDLHILYLVTPMF----EDWTTIDW 666
Query: 484 SKVYDRYTKFHPQTLRVAEALGVTENLVALNVTGKL------KDEKKALLCRFFHACILY 537
+ + + K RVAE +GV E +A V GK+ + + A+ RFF + +L
Sbjct: 667 YRFFCLWEKLPTSMKRVAELVGVEEGFLARCVKGKVVARTERQHRQMAIHKRFFTSLVLL 726
Query: 538 DVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELWCYKQ-LLTDLPQT 596
D+++ +++ + YG +Q+ + +A + F L W + LL+ +
Sbjct: 727 DLISEVPLREINQKYGCNRGQIQSLQQSAAVYAGMITVFSNRLG--WHNMELLLSQFQKR 784
Query: 597 LMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIARADAKEMVAKIRH-LPLRSAR 654
L + L L+ + + RAR L +G+ ++ +ARA+ E+ +++ +P +SAR
Sbjct: 785 LTFGIQRELCDLVRVSLLNAQRARVLYASGFHTVADLARANIVEVEVILKNAVPFKSAR 843
>gi|301786873|ref|XP_002928855.1| PREDICTED: LOW QUALITY PROTEIN: DNA polymerase theta-like
[Ailuropoda melanoleuca]
Length = 2634
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 201/714 (28%), Positives = 337/714 (47%), Gaps = 92/714 (12%)
Query: 13 AEEFKFYLEE--------YAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRID 64
A+E K+YL+ G G P + I +CTIE+ + LI LI+EN++D
Sbjct: 195 AKEKKYYLQSLFQEVGINVDGYMGSASP-RGHFTSLDIAVCTIERANGLINRLIEENKMD 253
Query: 65 EIGLIVIDEFHMLNEPQRGPILECVVSKVLY---------------LKKSIQIFAMSATI 109
+G++V+DE HML + RG +LE +++K+ Y L ++QI MSAT+
Sbjct: 254 LLGMVVVDELHMLGDSHRGYLLELLLTKICYITHKSASCQADLADPLSNAVQIVGMSATL 313
Query: 110 GNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGP 169
N+ +++++ Y N RP E V + ++ S L + NL
Sbjct: 314 PNLETVASWLNAELYHTNFRPVPLLESVKIGNSIYDS--SMKLVREFQPNLQVK---GDE 368
Query: 170 DAVLHL----VQGNLMVLIFCSSKIACSNLA---------LRLQFDRFPGTKEYKKQ--E 214
D V+ L + N VL+FC SK C LA L Q + E E
Sbjct: 369 DHVVSLCYETICDNHSVLLFCPSKKWCEKLADIIAHEFYNLHHQAKGLVRSSELPPVILE 428
Query: 215 KEDLIEALKE--ENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCT 272
++ L+E + + + L + L++ I +GVA+HHA LT ER +IE A+ G ++++ T
Sbjct: 429 QKALLEVMDQLKRSPSGLDSVLQKTIPWGVAFHHAGLTFEERDIIEGAFRQGQIRVLAAT 488
Query: 273 STLAAGVNLPAQRVIIRDSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFL 332
STL++GVNLPA+RVIIR + + YKQMVGRAGR G+ GESI++CK +
Sbjct: 489 STLSSGVNLPARRVIIRTPIFSGQPLDILTYKQMVGRAGRKGVDTVGESILVCKNSEKS- 547
Query: 333 RFSSMMNAGPEPISSHMD-------PPTLVDLILEVVAANLCSSLEDVKTLIKHTLF--- 382
+ +++ +PI S + +++ ILE++ + S+ +D++T T
Sbjct: 548 KGIALLQGSLKPIRSCLQRQEGEEVTASMIRAILEIIVGGVASTSQDMQTYASCTFLAAS 607
Query: 383 --------------YQLKSPEDQQTFLETTLSEIVASLLASKGTMLTMNEAGHLSLTSIA 428
QL + E +L+ +E + AS GT + HL
Sbjct: 608 MKEGKLGIQKNQKSVQLGAIEACVMWLQE--NEFIQITEASDGTEGKVYHPTHL-----G 660
Query: 429 KAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEYRIPSDGILLSRSKVYD 488
A + + LS L I++DL F L N LH+++LV P+ D + + +
Sbjct: 661 SATLSSSLSPTDTLDIFADLQRAMKGFVLENDLHIVYLVTPMF----EDWTTIDWYRFFC 716
Query: 489 RYTKFHPQTLRVAEALGVTENLVALNVTGKL--KDEKK----ALLCRFFHACILYDVLNF 542
+ K RVAE +GV E +A V GK+ + E++ A+ RFF + +L D+++
Sbjct: 717 LWEKLPTSMKRVAELVGVEEGFLARCVKGKVIARTERQHRQMAIHKRFFTSLVLLDLISE 776
Query: 543 DNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELWCYKQ-LLTDLPQTLMYCR 601
+++ + YG +Q+ + +A + F L W + LL+ + L +
Sbjct: 777 VPLKEINQKYGCSRGQIQSLQQSAAVYAGMITVFSNRLG--WHNMELLLSQFQKRLTFGI 834
Query: 602 APNLRALMDLPGVKIGRARQLLNAGYSSLELIARADAKEMVAKIRH-LPLRSAR 654
L L+ + + RAR L +G+ ++ +ARAD E+ +++ +P +SAR
Sbjct: 835 QRELCDLVRVSLLNAQRARFLYASGFLTVADLARADIAEVETVLKNAVPFKSAR 888
>gi|321475795|gb|EFX86757.1| hypothetical protein DAPPUDRAFT_312857 [Daphnia pulex]
Length = 1781
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 208/719 (28%), Positives = 339/719 (47%), Gaps = 90/719 (12%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+ EK + L E+ +E +AG PP L I ICTIEK + L+ LI++
Sbjct: 233 VAREKTRFLKSVTEDVGIRVESFAG--SSSPPGG--LKNCDIAICTIEKANSLVNRLIED 288
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYL------KKSIQIFAMSATIGNINA 114
+D++G++V+DE H++ + RG +LE +++K+LY + IQI MSAT+ ++
Sbjct: 289 GSLDQLGIVVVDELHIIGDSHRGYLLELLLTKILYAATRSGSRSPIQIVGMSATLPSLEI 348
Query: 115 LSTFIEGITYVENSRPTKHSEYVTV-------DKRVFQSFDGKSLTEIYADNLDYSLTGS 167
L+ ++ Y N RP E++ + D R+ + D L ++L Y +
Sbjct: 349 LAKWLRADLYQTNFRPIALKEHIKIGTDICHPDFRLIRKIDPARLVPNDIEHLIYLCLET 408
Query: 168 GPDAVLHLVQGNLMVLIFCSSKIACSNLALRLQFDRF----PGTKEY----KKQEKEDLI 219
++ GN VLIFC +K C +A + + F T +Y +KQ K DL+
Sbjct: 409 -------MLDGN-SVLIFCPTKNWCEKMAQNISGEFFNLGSSATSDYGAILRKQLKGDLL 460
Query: 220 ----EALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTL 275
E LK G L L + I +GVA+HHA LT ER IE A+ G ++++ TSTL
Sbjct: 461 AQVLERLKATPAG-LDPVLGQTIRFGVAFHHAGLTTEERENIEAAFRHGVIRVLIATSTL 519
Query: 276 AAGVNLPAQRVIIRDSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFS 335
++GVNLPA+RVIIR + +Y+QM+GRAGR G+ G+S ++C+ + +
Sbjct: 520 SSGVNLPARRVIIRTPIFHGTVMDPLVYRQMIGRAGRFGVDTDGDSYLICQPSEKH-QVQ 578
Query: 336 SMMNAGPEPISSH--MDPPTLVDL-----------ILEVVAANLCSSLEDVKTLIKHTLF 382
M NA P P+ S +D DL +LEV+A S+ ED+K TL
Sbjct: 579 RMFNAVPPPLKSCLLLDSTPSTDLSTTVTSSMKRAMLEVIATGSASTEEDLKLYASCTLL 638
Query: 383 YQLKSPEDQQTFLETTLSEIVASLLASKGTMLTMNEAGHLSLTSIAKAAVQAGLSHDVCL 442
L D ++ ++ +V++ + T+ E L+ T + A + + LS D L
Sbjct: 639 ALLNDVPDAA--IQACVAWLVSNEFIRRQTVDEGKE--RLTPTQLGLACLASSLSPDESL 694
Query: 443 IIYSDLLHNKLNFCLLNSLHMLFLVIPLEYRIPSDGILLSRSKVYDRYTK---FHPQTL- 498
++ ++L + L + LH+++ + P + V D+ T+ H TL
Sbjct: 695 VLLNELKTARRGLILDSDLHLVYQITP--------------TYVSDQMTQIDWLHYLTLW 740
Query: 499 --------RVAEALGVTENLV------ALNVTGKLKDEKKALLCRFFHACILYDVLNFDN 544
RV EA+GV E + + T + + A+ RF+ A L++++N
Sbjct: 741 EELNESQKRVGEAVGVEERFLIRAMKGTVTTTAPRQSRQMAIHRRFYTALALHELMNEVR 800
Query: 545 HQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELWCYKQLLTDLPQTLMYCRAPN 604
VA+ Y + LQ+ T+ FA V FC L Y LL L++
Sbjct: 801 LANVARTYKMNKGTLQSLQQQTATFAGMVTIFCHRLGWNTLY-VLLEHFQSRLLFGVQLE 859
Query: 605 LRALMDLPGVKIGRARQLLNAGYSSLELIARADAKEMVAKIRH-LPLRSARNLISAAKL 662
L LM LP + AR L +AG +++ +A A + + +++ P +SA+ A KL
Sbjct: 860 LCDLMRLPSMLSHTARLLYDAGLTNVSAVATASPENIEVLLKNACPFKSAKETEEAKKL 918
>gi|431919720|gb|ELK18077.1| DNA polymerase theta [Pteropus alecto]
Length = 2597
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 195/718 (27%), Positives = 345/718 (48%), Gaps = 100/718 (13%)
Query: 13 AEEFKFYLE---EYAGVK-----GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRID 64
A+E KFYL+ + G+K G P K + I +CTIE+ + L+ LI+EN++D
Sbjct: 156 AKEKKFYLQSLFQEVGIKVDGYMGSTSP-KGHFSSLDIAVCTIERANGLVNRLIEENKLD 214
Query: 65 EIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKK---------------SIQIFAMSATI 109
+G++V+DE HML + RG +LE +++K+ Y+ + ++QI MSAT+
Sbjct: 215 LLGMVVVDELHMLGDSHRGYLLELLLTKICYITQKSASCQADLASPLSYAVQIVGMSATL 274
Query: 110 GNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSF-----DGKSLTEIYADNLDYSL 164
N+ +++++ Y + RP E V + ++ S + + + ++ D
Sbjct: 275 PNLELVASWLNAELYHTDFRPVPLLESVKIGNSIYDSSMKLVREFQPMLQVKGDE----- 329
Query: 165 TGSGPDAVLHL----VQGNLMVLIFCSSKIACSNLA---------LRLQFDRFPGTKE-- 209
D V+ L ++ N VL+FC SK C LA L Q + + E
Sbjct: 330 -----DHVVSLCYETIRDNHSVLLFCPSKKWCEKLADTIAHEFYNLHHQAEGLVRSSEIS 384
Query: 210 ---YKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTL 266
+++ ++I+ LK G L + L++ I +GVA+HHA LT ER +IE A+ G +
Sbjct: 385 PVMLERKSLLEVIDQLKRSPSG-LDSVLQKTIPWGVAFHHAGLTFEERDIIEGAFRQGQI 443
Query: 267 QIICCTSTLAAGVNLPAQRVIIRDSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCK 326
+++ TSTL++GVNLPA+RVIIR G + + YKQMVGRAGR G+ GESI++CK
Sbjct: 444 RVLAATSTLSSGVNLPARRVIIRTPVFGGRTLDILTYKQMVGRAGRKGVDTEGESILICK 503
Query: 327 TMQDFLRFSSMMNAGPEPISSHMD-------PPTLVDLILEVVAANLCSSLEDVKTLIKH 379
+ + +++ +P+ S + +++ ILE++ + + +D++
Sbjct: 504 NSEKS-KGIALLQGSLKPVRSCLRRREGEEVTASMIRAILEIIVGGVARTPQDMQIYASC 562
Query: 380 TLF----------YQLKSPEDQQTFLETTL-----SEIVASLLASKGTMLTMNEAGHLSL 424
T Q Q +E + +E + ++ AS GT + HL
Sbjct: 563 TFLAASMKERKQGIQKNQDPVQHGAIEACVMWLLENEFIQTVEASDGTEGKVYHPTHL-- 620
Query: 425 TSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEYRIPSDGILLSRS 484
A + + LS L I++DL F L N LH+++LV P+ D +
Sbjct: 621 ---GSATLSSSLSPTDTLDIFADLQRAMKGFVLENDLHIVYLVTPMF----EDWTTIDWY 673
Query: 485 KVYDRYTKFHPQTLRVAEALGVTENLVALNVTGKL--KDEKK----ALLCRFFHACILYD 538
+ + + K RVAE +GV E +A + GK+ + E++ A+ RFF + +L D
Sbjct: 674 RFFCLWEKLPTSMKRVAELVGVEEGFLARCIKGKVVARTERQHRQMAIHKRFFTSLVLLD 733
Query: 539 VLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELWCYKQ-LLTDLPQTL 597
+++ +++ + YG +Q+ + +A + F L W + LL+ + L
Sbjct: 734 LISEVPLKEINQKYGCNRGQIQSLQQSAAVYAGMITVFSNRLG--WHNMELLLSQFQKRL 791
Query: 598 MYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIARADAKEMVAKIRH-LPLRSAR 654
+ L L+ + + RAR L +G ++ +ARA+ E+ +++ +P +SAR
Sbjct: 792 TFGIQRELCDLVRVSLLNAQRARSLYASGILTVADLARANIDEVETVLKNAVPFKSAR 849
>gi|440291188|gb|ELP84457.1| DNA polymerase theta, putative [Entamoeba invadens IP1]
Length = 1134
Score = 233 bits (593), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 197/665 (29%), Positives = 315/665 (47%), Gaps = 65/665 (9%)
Query: 6 YQSLAKAAEEFKFYLEEYAGVKG------QYPPTKRQLNKKSIYICTIEKGSKLIGSLIQ 59
Y SL E+ K++ E +A + Q P + I +CTIEK + L+ +IQ
Sbjct: 197 YVSLGN--EKAKYFAELFASTRNVVCGFFQSRPIHTNFD---IAVCTIEKANALVNKMIQ 251
Query: 60 ENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFI 119
+ ++G+IV+DE HML + RG ILE ++SKV+Y+ IQ+ MSAT+ +I+ + ++
Sbjct: 252 DKTFQKVGMIVVDEIHMLADKSRGYILETLLSKVMYVGGHIQVIGMSATVPDIHVIGMWL 311
Query: 120 EGITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGP-----DAVLH 174
+ TYV RP + +E V + +V S G+ L +L G G + +L
Sbjct: 312 KAETYVCTYRPVELTENVVCENKVL-SKSGEVLK---------TLCGGGEVNQIVELILE 361
Query: 175 LVQGNLMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQE---KEDLIEALKEENDGKLS 231
+ +G VL FCSSK C + D K+ KK ED IE L+E +L
Sbjct: 362 VSEGGKGVLCFCSSKYGCEKMGK----DIVANLKKRKKGGFGLNED-IETLRELMVEELR 416
Query: 232 TNLE-------ECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQ 284
TN+ +C+ G+AYHH+ +T ER ++E+ + G L +I TSTLA GVNLPA
Sbjct: 417 TNVNGSDEELLKCVRCGLAYHHSGITQEEREILEKGFREGVLSLIIATSTLAVGVNLPAS 476
Query: 285 RVIIRDSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEP 344
RVI Y+G DF+ + Y+QM GRAGR G GES + K + + + M+NA P
Sbjct: 477 RVIFNRPYIGIDFLDVGRYRQMCGRAGRLGFDTKGESYLFVK-VNEKKKVLEMVNAVLPP 535
Query: 345 I-SSHMDPPT--LVDLILEVVAANLCSSLEDVKTLIKHTLFYQLKSPED------QQTFL 395
+ S M+ T + ILE V + ++ D++ + +++ +PE + +
Sbjct: 536 LQESVMENETSKMSQSILEGVEDKMIATEIDMEKYCRCSIYTVSDNPETVEYTQHNREII 595
Query: 396 ETTLSEIVASLLASKGTMLTMNEAGH--LSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKL 453
+ ++ SL+ + +MN G T KA V +G+ D L +YSDL K
Sbjct: 596 NNAIQILMGSLMVEE----SMNACGEKVYVTTQFGKATVNSGIGMDDALRVYSDLNEAKK 651
Query: 454 NFCLLNSLHMLFLVIPLEYRIPSDGILLSRSKVYDRYTKFHPQTLRVAEALGVTENLV-A 512
+ L +L+LV + D + R +Y + + + L + V
Sbjct: 652 KIHADSELQVLYLVSAINTSSEVDWDVFER-----KYEELNETDREIFNELKIDVMFVRE 706
Query: 513 LNVTGKLKDEKKALLCRF-FHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFAS 571
+ K K++ K + + A +L D++ + +V K Y I HLQ T+ A+
Sbjct: 707 MQSKKKTKEDVKLRKHQMAYCALVLNDLIKERDISEVTKEYNIARGHLQALQTNTAASAN 766
Query: 572 KVYRFCEELPELWCYKQLLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLE 631
+ +FC +L Y + + L Y L L + GVK RAR+L G S++
Sbjct: 767 IIAQFCVQLGWDMMY-AVFAAIVDRLNYGVRRELVDLTRIEGVKGRRARELYKWGLRSVD 825
Query: 632 LIARA 636
+A A
Sbjct: 826 DVADA 830
>gi|344236562|gb|EGV92665.1| DNA polymerase theta [Cricetulus griseus]
Length = 2534
Score = 232 bits (592), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 193/714 (27%), Positives = 346/714 (48%), Gaps = 89/714 (12%)
Query: 13 AEEFKFYLE---EYAGVK-----GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRID 64
A+E K+YL+ + G+K G PT R + I +CTIE+ + LI LI+EN++D
Sbjct: 89 AKEKKYYLQSLFQEVGIKVDGYMGSSSPTGR-FSSLDIAVCTIERANGLINRLIEENKMD 147
Query: 65 EIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKK---------------SIQIFAMSATI 109
+G++V+DE HML + RG +LE +++K+ Y+ + ++QI MSAT+
Sbjct: 148 LLGMVVVDELHMLGDSHRGYLLELLLTKICYVTRKSTLCQADSARALCNAVQIVGMSATL 207
Query: 110 GNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSF-----DGKSLTEIYADNLDYSL 164
N+ ++++++ Y + RP E + + ++ S + + + ++ D
Sbjct: 208 PNLQLVASWLDAELYHTDFRPVPLLESIKIGNSIYDSSMKLVRELQPVLQVKGDE----- 262
Query: 165 TGSGPDAVLHL----VQGNLMVLIFCSSKIACSNLA---------LRLQFDRFPGTKEYK 211
D ++ L V N VL+FC SK C +A L Q +R E+
Sbjct: 263 -----DHIVSLCYETVCDNHSVLLFCPSKKWCEKVADIIAREFYNLHHQPERLVKPSEFP 317
Query: 212 --KQEKEDLIEALKE--ENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQ 267
+++ L+E + + + L + L+ + +GVA+HHA LT ER +IE A+ G ++
Sbjct: 318 PVNLDQKSLLEVMDQLKRSPSGLDSVLKNTVPWGVAFHHAGLTFEERDIIEGAFRQGLIR 377
Query: 268 IICCTSTLAAGVNLPAQRVIIRDSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKT 327
++ TSTL++GVNLPA+RVIIR G + + YKQMVGRAGR G+ GESI++CK
Sbjct: 378 VLAATSTLSSGVNLPARRVIIRTPVFGGQTLDILTYKQMVGRAGRKGVDTMGESILVCKP 437
Query: 328 MQDFLRFSSMMNAGPEPISSHMD----PPTLVDLILEVVAANLCSSLEDVKTLIKHTLFY 383
+ + +++ EP+ S + ++ ILE++ + S+ +D++T T F
Sbjct: 438 SEKS-KGVALLQGSLEPVHSCLQRQEVTANMIRAILEIIVGGVASTSQDMQTYASCT-FL 495
Query: 384 QLKSPEDQQTFLETTLSEIVASLLASKGTMLTMNE-----------AGHL-SLTSIAKAA 431
E +Q ++ ++ + + T L NE G + T + A
Sbjct: 496 AAAVKEGKQG-IQRNQDDVHFGAIDACVTWLLENEFIQEAEPSDGSGGKVYHPTHLGSAT 554
Query: 432 VQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEYRIPSDGILLSRSKVYDRYT 491
+ + LS L I++DL F L N LH+++LV P + D + + + +
Sbjct: 555 LSSSLSPTDTLDIFADLQRAMKGFVLENDLHIVYLVTP----VFEDWTGIDWYRFFCLWE 610
Query: 492 KFHPQTLRVAEALGVTENLVALNVTGKL------KDEKKALLCRFFHACILYDVLNFDNH 545
K RVAE +GV E +A V GK+ + + A+ RFF + +L D+++
Sbjct: 611 KLPTSMKRVAELVGVEEGFLARCVKGKVVARTDRQHRQMAIHKRFFTSLVLLDLISEIPL 670
Query: 546 QKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELWCYKQ-LLTDLPQTLMYCRAPN 604
+++ + YG +Q+ + +A + F L W + LL+ + L +
Sbjct: 671 KEINQKYGCNRGQIQSLQQSAAVYAGMITVFSNRLG--WHNMELLLSQFQKRLTFGIQRE 728
Query: 605 LRALMDLPGVKIGRARQLLNAGYSSLELIARADAKEMVAKIRH-LPLRSARNLI 657
L L+ + + RAR L +G+ ++ +ARA+ E+ +++ +P +S R +
Sbjct: 729 LCDLIRVSLLNAQRARFLYASGFLTVADLARANVAEVEVVLKNAVPFKSTRKAV 782
>gi|354477870|ref|XP_003501141.1| PREDICTED: DNA polymerase theta-like isoform 1 [Cricetulus griseus]
Length = 2571
Score = 232 bits (591), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 193/714 (27%), Positives = 346/714 (48%), Gaps = 89/714 (12%)
Query: 13 AEEFKFYLE---EYAGVK-----GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRID 64
A+E K+YL+ + G+K G PT R + I +CTIE+ + LI LI+EN++D
Sbjct: 149 AKEKKYYLQSLFQEVGIKVDGYMGSSSPTGR-FSSLDIAVCTIERANGLINRLIEENKMD 207
Query: 65 EIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKK---------------SIQIFAMSATI 109
+G++V+DE HML + RG +LE +++K+ Y+ + ++QI MSAT+
Sbjct: 208 LLGMVVVDELHMLGDSHRGYLLELLLTKICYVTRKSTLCQADSARALCNAVQIVGMSATL 267
Query: 110 GNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSF-----DGKSLTEIYADNLDYSL 164
N+ ++++++ Y + RP E + + ++ S + + + ++ D
Sbjct: 268 PNLQLVASWLDAELYHTDFRPVPLLESIKIGNSIYDSSMKLVRELQPVLQVKGDE----- 322
Query: 165 TGSGPDAVLHL----VQGNLMVLIFCSSKIACSNLA---------LRLQFDRFPGTKEYK 211
D ++ L V N VL+FC SK C +A L Q +R E+
Sbjct: 323 -----DHIVSLCYETVCDNHSVLLFCPSKKWCEKVADIIAREFYNLHHQPERLVKPSEFP 377
Query: 212 --KQEKEDLIEALKE--ENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQ 267
+++ L+E + + + L + L+ + +GVA+HHA LT ER +IE A+ G ++
Sbjct: 378 PVNLDQKSLLEVMDQLKRSPSGLDSVLKNTVPWGVAFHHAGLTFEERDIIEGAFRQGLIR 437
Query: 268 IICCTSTLAAGVNLPAQRVIIRDSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKT 327
++ TSTL++GVNLPA+RVIIR G + + YKQMVGRAGR G+ GESI++CK
Sbjct: 438 VLAATSTLSSGVNLPARRVIIRTPVFGGQTLDILTYKQMVGRAGRKGVDTMGESILVCKP 497
Query: 328 MQDFLRFSSMMNAGPEPISSHMD----PPTLVDLILEVVAANLCSSLEDVKTLIKHTLFY 383
+ + +++ EP+ S + ++ ILE++ + S+ +D++T T F
Sbjct: 498 SEKS-KGVALLQGSLEPVHSCLQRQEVTANMIRAILEIIVGGVASTSQDMQTYASCT-FL 555
Query: 384 QLKSPEDQQTFLETTLSEIVASLLASKGTMLTMNE-----------AGHL-SLTSIAKAA 431
E +Q ++ ++ + + T L NE G + T + A
Sbjct: 556 AAAVKEGKQG-IQRNQDDVHFGAIDACVTWLLENEFIQEAEPSDGSGGKVYHPTHLGSAT 614
Query: 432 VQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEYRIPSDGILLSRSKVYDRYT 491
+ + LS L I++DL F L N LH+++LV P + D + + + +
Sbjct: 615 LSSSLSPTDTLDIFADLQRAMKGFVLENDLHIVYLVTP----VFEDWTGIDWYRFFCLWE 670
Query: 492 KFHPQTLRVAEALGVTENLVALNVTGKL------KDEKKALLCRFFHACILYDVLNFDNH 545
K RVAE +GV E +A V GK+ + + A+ RFF + +L D+++
Sbjct: 671 KLPTSMKRVAELVGVEEGFLARCVKGKVVARTDRQHRQMAIHKRFFTSLVLLDLISEIPL 730
Query: 546 QKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELWCYKQ-LLTDLPQTLMYCRAPN 604
+++ + YG +Q+ + +A + F L W + LL+ + L +
Sbjct: 731 KEINQKYGCNRGQIQSLQQSAAVYAGMITVFSNRLG--WHNMELLLSQFQKRLTFGIQRE 788
Query: 605 LRALMDLPGVKIGRARQLLNAGYSSLELIARADAKEMVAKIRH-LPLRSARNLI 657
L L+ + + RAR L +G+ ++ +ARA+ E+ +++ +P +S R +
Sbjct: 789 LCDLIRVSLLNAQRARFLYASGFLTVADLARANVAEVEVVLKNAVPFKSTRKAV 842
>gi|261330379|emb|CBH13363.1| DNA polymerase theta (helicase domain only),putative [Trypanosoma
brucei gambiense DAL972]
Length = 1057
Score = 232 bits (591), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 197/708 (27%), Positives = 328/708 (46%), Gaps = 84/708 (11%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYP-PTKRQLNKKSIYICTIEKGSKLIGSLIQ 59
+ EK ++ + F ++ + +G++P P K++++CTIEK + L+ +++
Sbjct: 324 LAEEKTDAMIPLGDVLGFTVDGHYSTRGRFPLPVS-----KAVFVCTIEKANSLVNHMLE 378
Query: 60 ENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFI 119
EN I IG IV+DE HML E RG LE +++K+L L+ +QI MSATI N+ ++ ++
Sbjct: 379 ENTIGRIGTIVVDELHMLGETSRGATLELLLTKLLCLRHKVQIIGMSATIPNLPDIARWL 438
Query: 120 EGITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDA-------V 172
Y+ N RP +Y V V + DG+ + SL +G + +
Sbjct: 439 RASCYIGNYRPVPLRQYAVVGGEVLE--DGREVCR--------SLVAAGHTSENSQLVFL 488
Query: 173 LHLVQGNLMVLIFCSSK---IACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGK 229
V+G VL+FC+S+ ++ + L R + + + + A D +
Sbjct: 489 TTEVKG-ASVLVFCASRQQTVSTARLIARSRKEEIDKEGGVRYNAPSLALVADLRALDSE 547
Query: 230 LSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIR 289
S+ L + + YGVA+HH L A ER LIE A+ ++ ++CCTSTLAAGVNLPA+RVI +
Sbjct: 548 ESSLLSQLVPYGVAFHHGGLVAEERTLIETAFRRRSIGVLCCTSTLAAGVNLPARRVIFK 607
Query: 290 DSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHM 349
+V DF++ + Y QM GRAGR GL E GES + + +D R +M E S +
Sbjct: 608 TPFVAVDFLTKSRYLQMCGRAGRAGLDEFGESFLFL-SRKDRNRGCELMQQEVEACVSQL 666
Query: 350 --DPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQLKSPEDQ-------------QTF 394
+ T+ +LE VA L SL D + ++ LF+ P D+ +
Sbjct: 667 LEEKSTVERALLEFVAIGLIRSLSDARKWGENILFHHAPGPIDKGLNAGSVAVPEMLEGI 726
Query: 395 LETTLSEIV-------------------------ASLLASKGTMLTMNEAGH----LSLT 425
+++ LS++V + + +K N G LS +
Sbjct: 727 IQSALSKLVERGLMQRLSRPAADASRADSDVLGDSDVTNAKNGDAKNNGTGDGDAILSSS 786
Query: 426 SIAKAAVQAGLSHDVCLIIYSDLLH-NKLNFCLLNSLHMLFLVIPLEYRIPSDGILLSRS 484
+V++ + LI+ +L + L + LHM + V PL D I + S
Sbjct: 787 PFGSCSVRSCFGVEDALIVRLELEKLQQSGLILADDLHMCYFVTPLR-----DPIDVDWS 841
Query: 485 KVYDRYTKFHPQTLRVAEALGVTE---NLVALNVTGKLKDEKKALLC--RFFHACILYDV 539
D ++ + R+A +GV E N A+ + + RF+ A L D+
Sbjct: 842 IYRDILSQLNETRQRIASMIGVDEFYVNQRAMGLGDAGGNGGGRAFATRRFYAALALADL 901
Query: 540 LNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELWCYKQLLTDLPQTLMY 599
LN +V + Y LQN L S F+S + FC + E + + +L + L +
Sbjct: 902 LNEVPIGEVEQRYRCNRGQLQNLLRSASMFSSSITSFCRAM-EWYSLEAVLASFVKRLGF 960
Query: 600 CRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIARADAKEMVAKIRH 647
P++ LM++ GV+ GRAR L AG+ +A E++ +++
Sbjct: 961 GVKPDIIPLMEIKGVQPGRARALWRAGFKDPAAVAACTPAELLKRVKE 1008
>gi|72392731|ref|XP_847166.1| DNA polymerase theta (helicase domain only) [Trypanosoma brucei
TREU927]
gi|62359211|gb|AAX79654.1| DNA polymerase theta (helicase domain only), putative [Trypanosoma
brucei]
gi|70803196|gb|AAZ13100.1| DNA polymerase theta (helicase domain only), putative [Trypanosoma
brucei brucei strain 927/4 GUTat10.1]
Length = 1057
Score = 231 bits (590), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 197/708 (27%), Positives = 328/708 (46%), Gaps = 84/708 (11%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYP-PTKRQLNKKSIYICTIEKGSKLIGSLIQ 59
+ EK ++ + F ++ + +G++P P K++++CTIEK + L+ +++
Sbjct: 324 LAEEKTDAMIPLGDVLGFTVDGHYSTRGRFPLPVS-----KAVFVCTIEKANSLVNHMLE 378
Query: 60 ENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFI 119
EN I IG IV+DE HML E RG LE +++K+L L+ +QI MSATI N+ ++ ++
Sbjct: 379 ENTIGRIGTIVVDELHMLGETSRGATLELLLTKLLCLRHKVQIIGMSATIPNLPDIARWL 438
Query: 120 EGITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDA-------V 172
Y+ N RP +Y V V + DG+ + SL +G + +
Sbjct: 439 RASCYIGNYRPVPLRQYAVVGGEVLE--DGREVCR--------SLVAAGHTSESSQLVFL 488
Query: 173 LHLVQGNLMVLIFCSSK---IACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGK 229
V+G VL+FC+S+ ++ + L R + + + + A D +
Sbjct: 489 TTEVKG-ASVLVFCASRQQTVSTARLIARSRKEEVDKEGGVRYNASSLALVADLRALDSE 547
Query: 230 LSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIR 289
S+ L + + YGVA+HH L A ER LIE A+ ++ ++CCTSTLAAGVNLPA+RVI +
Sbjct: 548 ESSLLSQLVPYGVAFHHGGLVAEERTLIETAFRRRSIGVLCCTSTLAAGVNLPARRVIFK 607
Query: 290 DSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHM 349
+V DF++ + Y QM GRAGR GL E GES + + +D R +M E S +
Sbjct: 608 TPFVAVDFLTKSRYLQMCGRAGRAGLDEFGESFLFL-SRKDRNRGCELMQQEVEACVSQL 666
Query: 350 --DPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQLKSPEDQ-------------QTF 394
+ T+ +LE VA L SL D + ++ LF+ P D+ +
Sbjct: 667 LEEKSTVERALLEFVAIGLIRSLSDARKWGENILFHHAPGPIDKGLNAGSVAVPEMLEGI 726
Query: 395 LETTLSEIV-------------------------ASLLASKGTMLTMNEAGH----LSLT 425
+++ LS++V + + +K N G LS +
Sbjct: 727 IQSALSKLVERGLMQRLSRPAADASREDSDVLGDSDVTNAKNGDAKNNGTGDGDAILSSS 786
Query: 426 SIAKAAVQAGLSHDVCLIIYSDLLH-NKLNFCLLNSLHMLFLVIPLEYRIPSDGILLSRS 484
+V++ + LI+ +L + L + LHM + V PL D I + S
Sbjct: 787 PFGSCSVRSCFGVEDALIVRLELEKLQQSGLILADDLHMCYFVTPLR-----DPIDVDWS 841
Query: 485 KVYDRYTKFHPQTLRVAEALGVTE---NLVALNVTGKLKDEKKALLC--RFFHACILYDV 539
D ++ + R+A +GV E N A+ + + RF+ A L D+
Sbjct: 842 IYRDILSQLNETRQRIASMIGVDEFYVNQRAMGLGDAGGNGGGRAFATRRFYAALALADL 901
Query: 540 LNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELWCYKQLLTDLPQTLMY 599
LN +V + Y LQN L S F+S + FC + E + + +L + L +
Sbjct: 902 LNEVPIGEVEQRYRCNRGQLQNLLRSASMFSSSITSFCRAM-EWYSLEAVLASFVKRLGF 960
Query: 600 CRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIARADAKEMVAKIRH 647
P++ LM++ GV+ GRAR L AG+ +A E++ +++
Sbjct: 961 GVKPDIIPLMEIKGVQPGRARALWRAGFKDPAAVAACTPAELLKRVKE 1008
>gi|157111398|ref|XP_001651546.1| DNA polymerase theta [Aedes aegypti]
gi|108878374|gb|EAT42599.1| AAEL005888-PA [Aedes aegypti]
Length = 1987
Score = 231 bits (590), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 193/694 (27%), Positives = 329/694 (47%), Gaps = 85/694 (12%)
Query: 13 AEEFKFYLEEY---AGVK------GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRI 63
A E FYL+E AG++ G PP + + +CTIEK + ++ L+++ ++
Sbjct: 489 AREKMFYLQEILSPAGIRVEGFFGGHNPPGG--FDSVDVAVCTIEKANSIVNRLLEQRKL 546
Query: 64 DEIGLIVIDEFHMLNEPQRGPILECVVSKVLY----LKKSIQIFAMSATIGNINALSTFI 119
++GL+V+DE H++++ RG ILE +++K+ + L + IQ+ MSAT+ N+ L ++
Sbjct: 547 GDVGLLVVDEIHLISDSSRGYILELLLTKIRFASERLGERIQVVGMSATLPNMELLVEWL 606
Query: 120 EGITYVENSRPTKHSEYVTV-------DKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAV 172
+ + RP + E V + K++ + D EI D + +
Sbjct: 607 GAEQFRTDYRPIELKEMVKLGTCVFDNQKKLLRKLDPDPFQEIMRDQDNVA------QLC 660
Query: 173 LHLVQGNLMVLIFCSSKIACSNLALRL-QF------------DRFPGTKEYKKQEKEDLI 219
L + V++FC SK C LAL L +F +R +E + + E+ +
Sbjct: 661 LETILEGCSVIVFCPSKDRCEQLALHLAEFIYRTLKSGGNLGERL--RQEINRDKLEEAL 718
Query: 220 EALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGV 279
LK G L L + YG YHHA LTA ER +IE ++ +G L+II TSTL++GV
Sbjct: 719 GLLKNCPTG-LDAVLGKTARYGCVYHHAGLTADERDIIESSFKSGNLRIIVATSTLSSGV 777
Query: 280 NLPAQRVIIRDSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMN 339
NLPA+RVIIR G ++ Y+QM+GRAGR G GESI++C + ++
Sbjct: 778 NLPARRVIIRTPMFGGSVMNSLTYRQMIGRAGRKGRDILGESILMCDGQSSKAAW-ELVK 836
Query: 340 AGPEPISSHMDPPTLVDL---ILEVVAANLCSSLEDVKTLIKHTLF---------YQLKS 387
+PI+S +D L ILE++A+ + SS D+++ + TLF + + S
Sbjct: 837 TELKPIASCLDGDGYSHLKRAILEIIASGVASSTADLESFVNCTLFSCEKKCRFSFTIDS 896
Query: 388 PEDQQTFLETT-----------------LSEIVASLLASKGTMLTMN-EAGHLSL--TSI 427
E + + ++ V LL + + N E+G L T +
Sbjct: 897 LEQNHRHVAWSKKRESDTNHGEGESIDPIASCVRFLLEYEFIRMQTNVESGETLLVSTPL 956
Query: 428 AKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEYRIPSDGILLSRSKVY 487
A + A ++ +++S+L ++ F L + LH ++LV P Y + +S
Sbjct: 957 GNACLSASMAPRDGFLLFSELQKSRQCFVLESELHAIYLVTP--YSVSYQWQNISWVDFL 1014
Query: 488 DRYTKFHPQTLRVAEALGVTENLVALNVTGKLKD-EKKALLC--RFFHACILYDVLNFDN 544
+R+ RV E +G+ + + + GK+ + + ++L+ RF+ A L +++ +
Sbjct: 1015 ERWENMDAAMRRVGELIGIRDAFLVKGLRGKIGEADHESLMTHKRFYTALALKRLVDEEP 1074
Query: 545 HQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELW-CYKQLLTDLPQTLMYCRAP 603
VA+ + LQ+ V S FA V FC L W ++T + L + P
Sbjct: 1075 LSVVAQQFQCSRGLLQSLQQVASTFAGIVTAFCTSLN--WNLLAMIITQFRERLFFGVQP 1132
Query: 604 NLRALMDLPGVKIGRARQLLNAGYSSLELIARAD 637
+L LM + + RAR L NAG + L +A +D
Sbjct: 1133 DLLDLMRIASLNGQRARLLFNAGVTGLLELANSD 1166
>gi|440801182|gb|ELR22203.1| helicase domain containing protein [Acanthamoeba castellanii str.
Neff]
Length = 788
Score = 231 bits (590), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 187/632 (29%), Positives = 303/632 (47%), Gaps = 73/632 (11%)
Query: 53 LIGSLIQENRIDEIGLIVIDEF-----------HMLNEPQRGPILECVVSKVLYLKKSIQ 101
++ L +E R+ E+G +V+DE HM+ + +RG LE ++SKVL+L + Q
Sbjct: 180 IVSQLAEEGRLAELGAVVVDELRNVANRPDSTSHMIGDGERGAALEHLLSKVLFLSPTTQ 239
Query: 102 IFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLD 161
I MSATIGN+ + ++ TY + RP + + + VF G L + D+ D
Sbjct: 240 IVGMSATIGNLPQVGRWLRATTYTTDFRPVPLRQMIKIGSHVFDE-RGHRLRRMDPDSHD 298
Query: 162 YSLTGSGPDAVLHLVQGNL---MVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDL 218
+ +L L+ + VLIFC +K A L P + + + Q +E +
Sbjct: 299 A-------EQMLPLITEVIPQHSVLIFCPTKRQTEVCAKTLSVALPPASPDLR-QARELV 350
Query: 219 IEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAG 278
++ L+ G + + L + GVAYHH+ LT ER +IEEAY + + ++ CTSTLAAG
Sbjct: 351 LQRLRASGSG-VDSLLASTLPAGVAYHHSGLTTEEREIIEEAYRSRAINVLLCTSTLAAG 409
Query: 279 VNLPAQRVIIRDSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMM 338
VNLPA+RVIIR Y G F++ Y QMVGRAGR GL E GESI++ K +D R +++
Sbjct: 410 VNLPARRVIIRAPYTGNAFLTRARYLQMVGRAGRAGLDEYGESILIIKK-EDKQRGIALL 468
Query: 339 NAGPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQLKSPEDQQTFLETT 398
P S L ++L+ +A+ + +D+ T + +TL
Sbjct: 469 QGDIPPALSQCRDEALHRVLLDALASRYAPTTDDLCTFMSYTL----------------- 511
Query: 399 LSEIVASLLASKGTMLTMNEAGHLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLL 458
+G EA + + A+A ++GL+ V L + +L + + +
Sbjct: 512 -----------RGL-----EAWEGAGEARAEATSRSGLTPLVALALRDELENARRRLIVA 555
Query: 459 NSLHMLFLVIPLEYRI-PSDGILLSRSKVYDRYTKFHPQTLRVAEALGVTENLVALNVTG 517
+ LH+ +LV P+ + P D + L ++ Y K + A+GV E ++ TG
Sbjct: 556 DELHLCYLVTPIGNLLDPPDWMGL-----FNTYQKLGAVKQEIGSAVGVREAYLSARATG 610
Query: 518 KLKDEKKA----LLC-RFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASK 572
K+ +A +C RFF A +L+DVL + + Y + +Q + S FA+
Sbjct: 611 KVATTDEARRSHFVCQRFFTALVLHDVLREVPLRDITDRYRVNRGSIQQLMQKASSFANM 670
Query: 573 VYRFCEELPELWCYKQLLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLEL 632
FC+++ W L+ L + L L++L +K AR L AGY S
Sbjct: 671 SRVFCQQM-GWWELAVLMDKYVPRLFHGVKEELVPLVELASLKQPHARALFQAGYQSPRA 729
Query: 633 IARADAKEMVAKI---RHLPLRSARNLISAAK 661
IA+A A+++VA+ H + A+ +I AK
Sbjct: 730 IAQAQAEDLVARAGLGSHFSVEVAQRVIDEAK 761
>gi|326912829|ref|XP_003202748.1| PREDICTED: DNA polymerase theta-like [Meleagris gallopavo]
Length = 2152
Score = 231 bits (589), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 201/708 (28%), Positives = 329/708 (46%), Gaps = 109/708 (15%)
Query: 13 AEEFKFYLE--------EYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRID 64
A+E K YL+ G G P R + + +CTIEK + LI LI+EN++D
Sbjct: 138 AKEKKCYLQALFQEVDVRVEGYMGSISPAGR-FSSLDVAVCTIEKANGLINRLIEENQMD 196
Query: 65 EIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKK---------------SIQIFAMSATI 109
+G++V+DE HML + RG +LE +++KV Y+ + IQ+ MSAT+
Sbjct: 197 SLGVVVVDELHMLGDSHRGYLLELLLTKVRYITEKAAKRKAKMTSPGFGGIQVVGMSATL 256
Query: 110 GNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGP 169
N+ L+++++ Y + RP E+V + ++ S S+ + L G
Sbjct: 257 PNLGLLASWLDAELYCTDFRPVPLKEWVKIGNNIYDS----SMNLVREFQPKLQLKGD-E 311
Query: 170 DAVLHL----VQGNLMVLIFCSSKIACSNLA--LRLQFDRFPGTKEYKKQEK-------- 215
D V+ L V VL+FC SK C LA + +F + K
Sbjct: 312 DHVVSLCYETVCDGHSVLLFCPSKNWCEKLADIIAREFYSLQQAESSAKNSSLSPVVVDR 371
Query: 216 ---EDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCT 272
+++++ LK G L + L+ + +GVA+HHA LT ER +IE A+ G ++++ T
Sbjct: 372 EGIDEVLDQLKRSLSG-LDSVLQRTLPWGVAFHHAGLTFDERDVIEGAFRRGVIRVLAAT 430
Query: 273 STLAAGVNLPAQRVIIRDSYVGRDFISLNMYKQMVGRAGRTGL------QESGESIMLCK 326
STL++GVNLPA+RVIIR G + + YKQM GRAGR G+ + GE +
Sbjct: 431 STLSSGVNLPARRVIIRTPMFGGTLLDVLTYKQMAGRAGRKGVDTEESPRREGEGVA--- 487
Query: 327 TMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFY--- 383
SSM A ILE++ + + S+ +DV+T TL
Sbjct: 488 --------SSMKRA-----------------ILEIIVSGVASTPDDVQTYASCTLLASSL 522
Query: 384 ---QLKSPEDQQTFLETTLSEIVASLLASKGTML----TMNEAGHLSLTSIAKAAVQAGL 436
+ ++ ++Q + + +A LL ++ + +A T + A + + L
Sbjct: 523 KENKRENEKEQDKVQKGPIEACIAWLLENEFIQILECANDKKAKIFHPTHLGSATLSSSL 582
Query: 437 SHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEYRIPSDGILLSRSKVYDRYTKFHPQ 496
S + I+SDL +F L N LH+++LV PL D + + + + K
Sbjct: 583 SPTEAMEIFSDLQRAMKSFVLENDLHIVYLVTPLY----EDWTTIDWYQFFCLWEKLPAS 638
Query: 497 TLRVAEALGVTENLVALNVTGKL--KDEKK----ALLCRFFHACILYDVLNFDNHQKVAK 550
RVAE +G+ E +A +V GK+ K EK+ A+ RFF + L D+++ + + K
Sbjct: 639 MKRVAELVGIEEGFLARSVKGKITAKTEKQYRQMAIHKRFFTSLALLDLISEVPLKDMTK 698
Query: 551 MYGIQNSHLQNFLNVTSYFASKVYRFCEELPELWCYKQLLTDLPQTLMYCRAPNLRALMD 610
YG LQ+ + +A V FC L W +LL Q+ + R L D
Sbjct: 699 KYGCSRGQLQSLQQSAATYAGMVTVFCNRLG--WHNMELLLSQFQSRLTFGV--HRELCD 754
Query: 611 LPGVKI---GRARQLLNAGYSSLELIARADAKEMVAKIRH-LPLRSAR 654
L V + RAR L NAG+ ++ +A+A ++ +++ +P +S R
Sbjct: 755 LVRVSLLNAQRARMLYNAGFVTVADLAKASPGDVATALQNSVPFKSGR 802
>gi|345318618|ref|XP_001521144.2| PREDICTED: DNA polymerase theta, partial [Ornithorhynchus anatinus]
Length = 1881
Score = 231 bits (589), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 214/718 (29%), Positives = 340/718 (47%), Gaps = 99/718 (13%)
Query: 13 AEEFKFYLE--------EYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRID 64
A+E K+YLE G G P R + + +CTIE+ + LI LI+E ++D
Sbjct: 96 AKEKKYYLENLFQEVGLRVGGYMGSSSPAGR-FSSLDVAVCTIERANGLINRLIEEEKMD 154
Query: 65 EIGLIVIDEFHMLNEPQRGPILECVVSKVLYL---------------KKSIQIFAMSATI 109
+G++V+DE HML + RG +LE +++KVL++ ++ +QI MSAT+
Sbjct: 155 LLGMVVVDELHMLGDSHRGYLLELLLTKVLFVTRRTAASQASSPNDFREGVQIVGMSATL 214
Query: 110 GNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGP 169
N+ L++++ Y + RP E V + V+ + SL + + G
Sbjct: 215 PNLGLLASWLNAELYQTDFRPVPLLERVKIGGAVYDA----SLKLVRELQPVLRVKGDE- 269
Query: 170 DAVLHLV-----QGNLMVLIFCSSKIACSNLALRL--------QFDRFPGTKEYKKQEKE 216
D V+ L QG+ VL+FC SK C LA + Q P + +
Sbjct: 270 DHVVSLCYEVIHQGH-SVLVFCPSKSWCEKLADIIAREFYNLQQHPSHPAPVVLDQAGLQ 328
Query: 217 DLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLA 276
++ + LK G L + L+ + +GVA+HHA LT ER +IE A+ G ++ + TSTL+
Sbjct: 329 EVTDQLKRSPSG-LDSVLQRTVPWGVAFHHAGLTFDERDIIEGAFRQGLVRALVATSTLS 387
Query: 277 AGVNLPAQRVIIRDSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCK---------T 327
+GVNLPA+RVIIR G + + YKQM GRAGR G+ GESI++CK
Sbjct: 388 SGVNLPARRVIIRTPTFGGRPLDILTYKQMAGRAGRKGVDTVGESILVCKYSEKSKGIAL 447
Query: 328 MQDFLR--FSSMMNAGPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFY-- 383
+Q L+ S + E +++ M + ILE++ + S+ ++V+T TL
Sbjct: 448 LQGSLKPVRSCLRTGAGEEMTASM-----IRAILEIIVGGVASTAQEVQTYASCTLSAAS 502
Query: 384 ----QLKSPEDQQTFLETTLSEIVASLLASKGTMLTMNEAGH-------LSLTSIAKAAV 432
Q + DQ T + VA LL ++ + + EAG T + A +
Sbjct: 503 LREGQRAALGDQDTVERGAIEACVAWLLENE--FIRVREAGEDKGNRKVYQPTHLGLATL 560
Query: 433 QAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEYRIPSDGILLSRSKVYDRYTK 492
+ LS L +++DL F L N LH+L+LV P+ Y D I + + + + K
Sbjct: 561 SSSLSPTEALGVFADLQRAMKGFVLENDLHILYLVTPV-Y---EDWITIDWYQFFCLWEK 616
Query: 493 FHPQTLRVAEALGVTENLVALNVTGKL--KDEKK----ALLCRFFHACILYDVLNFDNHQ 546
RVAE +G+ E +A +V GK+ K EK+ A+ RFF + L D++N +
Sbjct: 617 LPTSMKRVAELVGIEEGFLARSVKGKIVAKTEKQHRQMAIHKRFFTSLALLDLINEVPLK 676
Query: 547 KVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELW-CYKQLLTDLPQTLMYCRAPNL 605
++ + +G +Q+ + +A V F L W +QLL L +
Sbjct: 677 EMTEKFGCSRGQIQSLQQSAATYAGMVTVFSNRL--GWHNMEQLLCQFQSRLSFG---VQ 731
Query: 606 RALMDLPGVKIG-----RARQLLNAGYSSLELIARADAKEMVAKIRHL-PLRSARNLI 657
R L DL V++ RAR L AG ++ +ARA A + A +R+ P RS R +
Sbjct: 732 RELCDL--VRVSLLNAQRARALYAAGLVTVADLARAGADRVEAALRNAGPFRSTRRAV 787
>gi|348566979|ref|XP_003469279.1| PREDICTED: DNA polymerase theta-like isoform 1 [Cavia porcellus]
Length = 2569
Score = 231 bits (589), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 193/720 (26%), Positives = 342/720 (47%), Gaps = 105/720 (14%)
Query: 13 AEEFKFYLE---EYAGVK-----GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRID 64
A+E K+YL+ + G+K G PT + I +CTIE+ + LI LI+E+++D
Sbjct: 150 AKEKKYYLQNLFQEVGIKVDGYMGSTSPTG-HFSSLDIAVCTIERANGLINRLIEEDKMD 208
Query: 65 EIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKK---------------SIQIFAMSATI 109
+G++V+DE HML + RG +LE +++K+ YL + ++Q+ MSAT+
Sbjct: 209 LLGMVVVDELHMLGDCHRGYLLELLLTKICYLTQKSASRQADLASPLSNAVQVVGMSATL 268
Query: 110 GNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSF-----DGKSLTEIYADNLDYSL 164
N+ +++++ Y + RP E + + ++ S + + + ++ D
Sbjct: 269 PNLELVASWLNAELYHTDFRPVPLLESIKIGNSIYDSSMKLIREFQPMLQVKEDE----- 323
Query: 165 TGSGPDAVLHL----VQGNLMVLIFCSSKIACSNLA--LRLQFDRFPGTKEYKKQEKE-- 216
D V+ L V N VL+FC SK C LA + +F R + E ++ E
Sbjct: 324 -----DHVVSLCYETVCDNHSVLLFCPSKKWCEKLADIIAREFYRLHHSAEGLGKQSEFT 378
Query: 217 ----------DLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTL 266
++++ LK G L + L++ + +GVA+HHA LT ER +IE A+ G +
Sbjct: 379 PPILEPKSLLEVVDQLKRSPSG-LDSVLQKTVPWGVAFHHAGLTFEERDIIEGAFRQGLI 437
Query: 267 QIICCTSTLAAGVNLPAQRVIIRDSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCK 326
+++ TSTL++GVNLPA+RVIIR +++ YKQMVGRAGR G+ GESI++CK
Sbjct: 438 RVLAATSTLSSGVNLPARRVIIRTPVFSGHPLNILTYKQMVGRAGRKGVDTMGESILICK 497
Query: 327 TMQDFLRFSSMMNAGPEPISSHMD------PPTLVDLILEVVAANLCSSLEDVKTLIKHT 380
+ + +++ +P+ S + +++ ILE++ + S+ +D++ T
Sbjct: 498 NSEKS-KGIALLQGSLKPVCSCLQRQDGEITASMIRAILEIIVGGVASTSQDIQIYASCT 556
Query: 381 LFYQLKSPEDQQT------------------FLETTLSEIVASLLASKGTMLTMNEAGHL 422
+ E Q+ LE +I+ ++G + G
Sbjct: 557 FLAASMTKEKQRIQKNQDSVQLGAIEACVMWLLENEFIQIIEDRNGTEGNVYHPTHLGTA 616
Query: 423 SLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEYRIPSDGILLS 482
+L+S LS L I++DL F L N LH+++LV P+ D +
Sbjct: 617 TLSS--------SLSPTDTLDIFADLQRAMKGFVLENDLHIVYLVTPMF----EDWTTID 664
Query: 483 RSKVYDRYTKFHPQTLRVAEALGVTENLVALNVTGKL------KDEKKALLCRFFHACIL 536
+ + + K RVAE +GV E +A V GK+ + + A+ RFF + +L
Sbjct: 665 WYRFFCLWEKLPTSMKRVAELVGVEEGFLARCVKGKVVARTERQHRQMAIHKRFFTSLVL 724
Query: 537 YDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELWCYKQ-LLTDLPQ 595
D+++ +++ + YG +Q+ + +A + F L W + LL+ +
Sbjct: 725 LDLISEIPLKEIIQKYGCNRGQIQSLQQSAAVYAGMITVFSNRLG--WHNMELLLSQFQK 782
Query: 596 TLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIARADAKEM-VAKIRHLPLRSAR 654
L + L L+ + + RAR L +G+ ++ +ARA+ E+ V R +P +SAR
Sbjct: 783 RLTFGIQRELCDLVRVSLLNAQRARVLYASGFLTVADLARANVAEVEVVLKRAVPFKSAR 842
>gi|308522710|ref|NP_001184156.1| polymerase (DNA directed), theta [Xenopus (Silurana) tropicalis]
Length = 2671
Score = 231 bits (588), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 191/679 (28%), Positives = 326/679 (48%), Gaps = 79/679 (11%)
Query: 42 IYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKK--- 98
+ +CTIEK + L+ LI+EN+ID +G++V+DE HML + RG +LE +++KV Y+ +
Sbjct: 307 VAVCTIEKANGLVNRLIEENKIDLLGMMVVDELHMLGDSHRGYLLELLLTKVRYVTQKGA 366
Query: 99 ------------SIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQS 146
+QI MSAT+ N+ L+ +++ Y + RP E V + + V+ S
Sbjct: 367 VGRKAEGAGPANDVQIVGMSATLPNLGLLAAWLDAELYHTDFRPVPLLERVKIGRTVYDS 426
Query: 147 -----FDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLA--LRL 199
+ + L + D+ D+ ++ S V+G +LIFC SK C LA +
Sbjct: 427 NMVAVREFEPLLPVKGDD-DHIVSLS-----YETVRGGHSILIFCPSKNWCEKLADTIAR 480
Query: 200 QF----------------DRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVA 243
+F D F + D+++ LK G L L + +GVA
Sbjct: 481 EFYNLFHRAQQRGDAGGSDSFVPPVALDRDGIRDVMDQLKRSPAG-LDAVLGRTVPWGVA 539
Query: 244 YHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGRDFISLNMY 303
+HHA LT ER ++E A+ G ++++ TSTL++GVNLPA+RVIIR + + Y
Sbjct: 540 FHHAGLTFDERDIVEGAFRQGFVRVLAATSTLSSGVNLPARRVIIRSPLFNGRLLDILTY 599
Query: 304 KQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHM-------DPPTLVD 356
KQM GRAGR G+ GESI++CK + + S++ +P+ S + +++
Sbjct: 600 KQMAGRAGRKGVDTEGESILVCKN-PERAKGISLLQGSLKPVQSCLLRKEGAGVTGSMIR 658
Query: 357 LILEVVAANLCSSLEDVKTLIKHTLF---YQLKSPEDQQTFLETTLSEIVASLLASKGTM 413
ILE++ + + EDV+ TL + + ++ + V LL ++
Sbjct: 659 AILEIIVGGVADTPEDVRIYASCTLLAASMKQGGGDQEEEHGGGAIEACVDWLLRNEFIQ 718
Query: 414 LTMNEAGHLSL-----TSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVI 468
+ + G T + A + + LS L I++DL F L N LH+L+LV
Sbjct: 719 ILEEDRGGTKAEVYRPTKLGAATLSSSLSPSEALGIFADLQRAMKGFVLENDLHILYLVT 778
Query: 469 PLEYRIPSDGILLSRSKVYDRYTKFHPQTLRVAEALGVTENLVALNVTGKL--KDEKK-- 524
P+ Y + + + + + K RVAE +G+ E +A +V GK+ K++++
Sbjct: 779 PV-YE---EWTTIDWYQFFCLWEKLPTSMKRVAELVGIEEGFLARSVNGKIVAKNDRQHR 834
Query: 525 --ALLCRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPE 582
A+ RFF + +L D+++ + +++ K YG LQ+ + +A V F L
Sbjct: 835 QIAIHRRFFTSLVLLDLISEVSLKELTKKYGCSRGQLQSLQQSAATYAGMVTVFSNRL-- 892
Query: 583 LWCYKQLLTDLPQTLMYCRAPNLRALMDLPGVKI---GRARQLLNAGYSSLELIARADAK 639
W +LL Q+ + R L DL V + RAR L NAG ++ +ARA
Sbjct: 893 GWHNMELLLSQFQSRLTFGV--QRELCDLVRVDLLNAQRARALYNAGLVTVAELARAHVI 950
Query: 640 EMVAKIRH-LPLRSARNLI 657
++ +++ +P +S R +
Sbjct: 951 DVETALKNAVPFKSGRQAV 969
>gi|425773040|gb|EKV11415.1| DNA-directed DNA polymerase theta, putative [Penicillium digitatum
PHI26]
gi|425782185|gb|EKV20109.1| DNA-directed DNA polymerase theta, putative [Penicillium digitatum
Pd1]
Length = 940
Score = 230 bits (587), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 174/637 (27%), Positives = 302/637 (47%), Gaps = 52/637 (8%)
Query: 42 IYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQ 101
I +CTIEK + LI S I+E I ++G++V+DE HML++ RG +LE +V+K+L L++ IQ
Sbjct: 267 IAVCTIEKANSLINSAIEECSIGDLGVVVLDELHMLDDEHRGYLLELMVTKLLLLQQDIQ 326
Query: 102 IFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTE------- 154
I MSAT+ N L+ ++ ++ RP EY+ + ++ + + + L +
Sbjct: 327 IVGMSATLSNTEMLAQWMNAKFHISTYRPIPIDEYLVYENGIYPAANSRQLFQTASKLTA 386
Query: 155 ------------IYADNLDYSLTGSGPDAVLHLV----QGNLMVLIFCSSKIACSNLALR 198
I + L+ S +A++ L L+FC S+ AC A
Sbjct: 387 AASLHDTIPPQRIIEPSTFKQLSNSATNAMVALAVETAAAGFGSLVFCGSRNACQVHAAT 446
Query: 199 LQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIE 258
+ + P + + ++ DL+ L+ G L LE I+ G +H+A +T ER LI
Sbjct: 447 IG-EAMPPAEPEELNKRLDLLAELRSLACG-LDPALETTIIKGAGFHNAGMTTEERELIA 504
Query: 259 EAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGRDFISLNMYKQMVGRAGRTGLQES 318
+AY G ++++ T +LAAGVNLPA+RVII + +GR+ + M++QM GRAGR G ++
Sbjct: 505 QAYDQGVIKVLVATCSLAAGVNLPARRVIINGARMGRELVGPAMFRQMCGRAGRKGKDDA 564
Query: 319 GESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPT--LVDLILEVVAANLCSSLEDVKTL 376
GE+ ++C D +++A I S + P L +LE VA L S E +K
Sbjct: 565 GETYLIC-VKADMQAVCDLLDADMPAIESCLAPEKRGLKRALLEAVATGLVSGCEAIKEF 623
Query: 377 IKHTLFYQLKSPEDQQTFLETTLSEIVASLLASKGTMLTMNEAGHLSLTSIAKAAVQAGL 436
++ TL Y+ + T ++T L E+V L L E T + +A V +
Sbjct: 624 VRCTLLYRTLDKKIAYTIMKTALQELVDEEL------LIRREDESYEATPLGQAVVASAF 677
Query: 437 SHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEYRI--PSDGILLSRSKVYDRYTKFH 494
S + L ++ +L F + +H+ ++ PL+ + P D + D+ +
Sbjct: 678 SPEDGLFVHEELKRALQAFVMDGDMHIFYMFTPLQAAMNTPIDWQIFR-----DQLDRLD 732
Query: 495 PQTLRVAEALGVTENLV--------ALNVTGKLKDEKKALLCRFFHACILYDVLNFDNHQ 546
LR + +GV V +L T ++ ++ + R + A L D+ N
Sbjct: 733 ESGLRALQFVGVQPGFVNTMVQSGASLKETTPIQMKQARIYRRAYTAFQLRDLSNEVPLS 792
Query: 547 KVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELWCYKQLLTDLPQTLMYCRA-PNL 605
+A+ Y I +Q FA+ + +FC+ + W + D + + A +L
Sbjct: 793 TIAQRYKIPRGTVQTLAQQCHGFAAGIVKFCQRMN--WGMMAAVLDHMRDRLEAGARADL 850
Query: 606 RALMDLPGVKIGRARQLLNAGYSSLELIARADAKEMV 642
+ + VK AR L + G+ +L +A A+ K++V
Sbjct: 851 LEMAQVTFVKSWTARLLRDNGFRNLRALAEAEPKDLV 887
>gi|60219516|emb|CAI56770.1| hypothetical protein [Homo sapiens]
Length = 2149
Score = 229 bits (584), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 194/696 (27%), Positives = 332/696 (47%), Gaps = 94/696 (13%)
Query: 28 GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILE 87
G P+ R + I +CTIE+ + LI LI+EN++D +G++V+DE HML + RG +LE
Sbjct: 2 GSTSPS-RHFSSLDIAVCTIERANGLINRLIEENKMDLLGMVVVDELHMLGDSHRGYLLE 60
Query: 88 CVVSKVLY---------------LKKSIQIFAMSATIGNINALSTFIEGITYVENSRPTK 132
+++K+ Y L ++QI MSAT+ N+ +++++ Y + RP
Sbjct: 61 LLLTKICYITRKSASCQADLASSLSNAVQIVGMSATLPNLELVASWLNAELYHTDFRPVP 120
Query: 133 HSEYVTVDKRVFQSF-----DGKSLTEIYADNLDYSLTGSGPDAVLHL----VQGNLMVL 183
E V V ++ S + + + ++ D D V+ L + N VL
Sbjct: 121 LLESVKVGNSIYDSSMKLVREFEPMLQVKGDE----------DHVVSLCYETICDNHSVL 170
Query: 184 IFCSSKIACSNLA---------LRLQFDRFPGTKE-----YKKQEKEDLIEALKEENDGK 229
+FC SK C LA L Q + E +++E ++++ L+ G
Sbjct: 171 LFCPSKKWCEKLADIIAREFYNLHHQAEGLVKPSECPPVILEQKELLEVMDQLRRLPSG- 229
Query: 230 LSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIR 289
L + L++ + +GVA+HHA LT ER +IE A+ G ++++ TSTL++GVNLPA+RVIIR
Sbjct: 230 LDSVLQKTVPWGVAFHHAGLTFEERDIIEGAFRQGLIRVLAATSTLSSGVNLPARRVIIR 289
Query: 290 DSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHM 349
G + + YKQMVGRAGR G+ GESI++CK + + +++ +P+ S +
Sbjct: 290 TPIFGGRPLDILTYKQMVGRAGRKGVDTVGESILICKNSEKS-KGIALLQGSLKPVRSCL 348
Query: 350 D-------PPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQLKSPEDQQTFLETTLS-- 400
+++ ILE++ + S+ +D+ T T F E +Q S
Sbjct: 349 QRREGEEVTGSMIRAILEIIVGGVASTSQDMHTYAACT-FLAASMKEGKQGIQRNQESVQ 407
Query: 401 --------------EIVASLLASKGTMLTMNEAGHLSLTSIAKAAVQAGLSHDVCLIIYS 446
E + S AS GT + HL A + + LS L I++
Sbjct: 408 LGAIEACVMWLLENEFIQSTEASDGTEGKVYHPTHL-----GSATLSSSLSPADTLDIFA 462
Query: 447 DLLHNKLNFCLLNSLHMLFLVIPLEYRIPSDGILLSRSKVYDRYTKFHPQTLRVAEALGV 506
DL F L N LH+L+LV P+ D + + + + K RVAE +GV
Sbjct: 463 DLQRAMKGFVLENDLHILYLVTPMF----EDWTTIDWYRFFCLWEKLPTSMKRVAELVGV 518
Query: 507 TENLVALNVTGKL--KDEKK----ALLCRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQ 560
E +A V GK+ + E++ A+ RFF + +L D+++ +++ + YG +Q
Sbjct: 519 EEGFLARCVKGKVVARTERQHRQMAIHKRFFTSLVLLDLISEVPLREINQKYGCNRGQIQ 578
Query: 561 NFLNVTSYFASKVYRFCEELPELWCYKQ-LLTDLPQTLMYCRAPNLRALMDLPGVKIGRA 619
+ + +A + F L W + LL+ + L + L L+ + + RA
Sbjct: 579 SLQQSAAVYAGMITVFSNRLG--WHNMELLLSQFQKRLTFGIQRELCDLVRVSLLNAQRA 636
Query: 620 RQLLNAGYSSLELIARADAKEMVAKIRH-LPLRSAR 654
R L +G+ ++ +ARA+ E+ +++ +P +SAR
Sbjct: 637 RVLYASGFHTVADLARANIVEVEVILKNAVPFKSAR 672
>gi|121702745|ref|XP_001269637.1| DNA-directed DNA polymerase theta, putative [Aspergillus clavatus
NRRL 1]
gi|119397780|gb|EAW08211.1| DNA-directed DNA polymerase theta, putative [Aspergillus clavatus
NRRL 1]
Length = 940
Score = 229 bits (583), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 179/640 (27%), Positives = 298/640 (46%), Gaps = 53/640 (8%)
Query: 42 IYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQ 101
I +CTIEK + LI + ++E I ++G++V+DE HML++ RG ILE +V+K+L L++ IQ
Sbjct: 262 IAVCTIEKANSLINTAVEECTIGDLGVVVLDELHMLDDEHRGYILELMVTKLLLLRQDIQ 321
Query: 102 IFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLD 161
I MSAT+ N L+ ++ ++ RP EY+ + ++ + + L + L
Sbjct: 322 IIGMSATLSNTELLADWMNAKFFISTYRPVPIDEYLIYENAIYPAATSRQLFQTIT-RLQ 380
Query: 162 YSLTGSGPDAVL--HLVQG-----------NLMV-------------LIFCSSKIACSNL 195
+ T S D + L+Q N MV L+FC S+ C +
Sbjct: 381 QTKTASLTDTMPPHRLIQPSKFRQLENPMTNAMVALAVDTAIAGYGALVFCGSRQGC-QI 439
Query: 196 ALRLQFDRFPGTKEYKKQE---KEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAG 252
+ + + P E +E + DL+ L+ G L LE L GV +HHA +T
Sbjct: 440 SAAIISEAMPTVSEIDAEELSKRLDLLAELRSLPSG-LDPVLENITLKGVGFHHAGMTTE 498
Query: 253 ERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGRDFISLNMYKQMVGRAGR 312
ER I +AY G L++I T +LAAGVNLPA+RVII + +GR+ + M +QM GRAGR
Sbjct: 499 EREFIAQAYDQGVLKVIVATCSLAAGVNLPARRVIINGARMGRELVGPAMLRQMCGRAGR 558
Query: 313 TGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPT--LVDLILEVVAANLCSSL 370
G ++GE+ ++C D ++ A I S + P L +LE +A L S
Sbjct: 559 KGKDDAGETYLICGKA-DIQAVCDLLEADMPAIESCLAPEKRGLKRALLEAIATGLVSGC 617
Query: 371 EDVKTLIKHTLFYQLKSPEDQQTFLETTLSEIVASLLASKGTMLTMNEAGHLSLTSIAKA 430
E +K ++ TL Y+ + T + ++L E+V L L + E T + +A
Sbjct: 618 EAIKEYVRCTLLYRTVDKKLAYTIMASSLQELVDEEL------LILREDESYEATKLGQA 671
Query: 431 AVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEYRIPSDGILLSRSKVYDRY 490
V + + + L ++ +L F + +H+ ++ P++ + I + D+
Sbjct: 672 VVASAFAPEDGLFVHEELKRALKAFVMDGEMHIFYMFTPIQVAM---NIQIDWLIFRDQL 728
Query: 491 TKFHPQTLRVAEALGVTENLVALNVT--GKLKDE------KKALLCRFFHACILYDVLNF 542
LR + +GV V + V G LK+E + + R + A L D+ N
Sbjct: 729 DNLDESGLRALQFVGVQPYFVNMMVQTGGWLKEETPEQIKQATIYRRAYTAFQLRDLSNE 788
Query: 543 DNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELWCYKQLLTDLPQTLMYCRA 602
+A Y I +Q FA+ + +FC+ + + +L + L
Sbjct: 789 VPLSTIANRYNIPRGAVQTLAQQCHGFAAGMVKFCQRM-DWGMLAAVLDHMRDRLEAGAR 847
Query: 603 PNLRALMDLPGVKIGRARQLLNAGYSSLELIARADAKEMV 642
+L + + VK AR L G+ +L +A ADAK++V
Sbjct: 848 ADLLEMAQVTYVKGWTARLLRENGFRNLRALAEADAKDIV 887
>gi|410929499|ref|XP_003978137.1| PREDICTED: LOW QUALITY PROTEIN: DNA polymerase theta-like [Takifugu
rubripes]
Length = 2305
Score = 228 bits (582), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 201/714 (28%), Positives = 336/714 (47%), Gaps = 74/714 (10%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+ EK L EE +E Y G + +CTIEK + LI LI+E
Sbjct: 241 VAKEKMHYLQSVFEEAGVRVEGYMGSTS----AAGGFTSLDVAVCTIEKANSLINRLIEE 296
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKK----------SIQIFAMSATIG 110
+ + +G++V+DE HM+ + RG +LE +++K+ Y+ + IQI MSAT+
Sbjct: 297 DNMGLLGMVVVDELHMVGDSGRGYLLELLLTKICYIAQKQNTTGSFLEGIQIIGMSATLP 356
Query: 111 NINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPD 170
N++ L++++ Y N RP EY+ V ++ GK L+ + ++ G D
Sbjct: 357 NLSLLASWLGAELYQTNYRPVPLHEYLKVGCNIY----GKHLSVVRQFVPALNIKGDD-D 411
Query: 171 AVLHL----VQGNLMVLIFCSSKIACSNLA---------LRLQFDRFPGTKEYKKQEKED 217
++ L V+ VL+FC SK C LA LR + P ++ D
Sbjct: 412 HIVSLCYETVREGCSVLLFCPSKNWCEKLADSIAREFYNLRNSGEAEPPPVPLDQEGLVD 471
Query: 218 LIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAA 277
++ L+ G L + L+ + +GVA+HHA LT ER ++E A+ G ++++ TSTL++
Sbjct: 472 VVAQLRRTPAG-LDSILQRTVPWGVAFHHAGLTFDERDVLEGAFRQGLVRVLAATSTLSS 530
Query: 278 GVNLPAQRVIIRDSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSM 337
GVNLPA+RVIIR + YKQM GRAGR G+ GES+++CK ++ S+
Sbjct: 531 GVNLPARRVIIRTPTFNGHLLDPLTYKQMSGRAGRKGVDTIGESLLVCKEVERHNGI-SL 589
Query: 338 MNAGPEPISSHM-------DPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQLKSPED 390
+ +PISS + +++ ILE++ + S+ +DV+ +L E+
Sbjct: 590 LKGSLQPISSCLVRREGEGVTTSMLRAILEIIVGGVASTPQDVRLYASCSLLAASSKLEE 649
Query: 391 QQTFLETTLSEIVASLLASKGTMLTMNEAGHLSL----------TSIAKAAVQAGLSHDV 440
+ E L +++ + G S T + A + + LS
Sbjct: 650 LEEVTNKGAIEACVEWLMDN-EFISIQKIGEGSTSYIFXELYCPTQLGAATLSSSLSPPE 708
Query: 441 CLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEYRIPSDGILLSRSKVYDRYTKFHPQTLRV 500
L +++DL F L N LH+L+L+ PL ++ + + + + + RV
Sbjct: 709 SLAVFADLQRAMKGFVLENDLHILYLITPLY----AEWTTIDWYQFFCLWEQLSSSMKRV 764
Query: 501 AEALGVTENLVALNVTGKL--KDEKK----ALLCRFFHACILYDVLNFDNHQKVAKMYGI 554
AE +GV E +A +V+GKL K EK+ A+ RFF +L+D++N VA Y
Sbjct: 765 AELVGVQEGFLARSVSGKLIAKTEKQRRQMAVHKRFFTTLVLHDLVNEVPLGTVASKYSC 824
Query: 555 QNSHLQNFLNVTSYFASKVYRFCEELPELWCYKQLLTDLPQTLMYCRAPNLRALMDLPGV 614
LQ+ + +A V FC+ L W +LL QT + R L+DL V
Sbjct: 825 SRGQLQSLQQSAATYAGMVTVFCKRLG--WHNMELLLSQYQTRLSFGI--QRELVDL--V 878
Query: 615 KIG-----RARQLLNAGYSSLELIARADAKEMVAKIRH-LPLRSARNLISAAKL 662
+I RAR L G ++ +ARA E+ +R+ +P +S++ + +++
Sbjct: 879 RISLLNAPRARTLYAQGLCTVSELARATVAEVEKALRNAVPFKSSKRAVDESEV 932
>gi|291400571|ref|XP_002716686.1| PREDICTED: DNA polymerase theta isoform 1 [Oryctolagus cuniculus]
Length = 2585
Score = 228 bits (582), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 197/718 (27%), Positives = 341/718 (47%), Gaps = 100/718 (13%)
Query: 13 AEEFKFYLE---EYAGVK-----GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRID 64
A+E K+YL+ + G+K G P R + I +CTIE+ + L+ LI+E+++D
Sbjct: 151 AKEKKYYLQSLFQEVGIKVDGYMGSSSPAGR-FSSLDIAVCTIERANGLVNRLIEEDKMD 209
Query: 65 EIGLIVIDEFHMLNEPQRGPILECVVSKVLY---------------LKKSIQIFAMSATI 109
+G++V+DE HML + RG +LE +++K+ Y L ++QI MSAT+
Sbjct: 210 LLGMVVVDELHMLGDSHRGYLLELLLTKICYITQKSASCRAGLASPLSNAVQIVGMSATL 269
Query: 110 GNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSF-----DGKSLTEIYADNLDYSL 164
N+ +++++ Y + RP E + + ++ S + + L + D
Sbjct: 270 PNLELVASWLNAELYHTDFRPVPLLESIKIGNSIYDSSMKLVREFQPLLHVKGDE----- 324
Query: 165 TGSGPDAVLHL----VQGNLMVLIFCSSKIACSNLA---------LRLQFDRFPGTKEY- 210
D ++ L ++ N VL+FC SK C LA L Q + E+
Sbjct: 325 -----DHIVSLCYETIRDNHSVLLFCPSKKWCEKLADVVAREFYNLHHQVEELVKPPEFP 379
Query: 211 ----KKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTL 266
+K+ ++I+ LK G L + L++ I +GVA+HHA LT ER +IE A+ G +
Sbjct: 380 PVILEKKGLLEVIDQLKRLPSG-LDSVLQKTIPWGVAFHHAGLTFEERDIIEGAFRQGLI 438
Query: 267 QIICCTSTLAAGVNLPAQRVIIRDSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCK 326
+++ TSTL++GVNLPA+RVIIR G + + YKQMVGRAGR G+ GESI++CK
Sbjct: 439 RVLAATSTLSSGVNLPARRVIIRTPIFGGRTLDILTYKQMVGRAGRKGVDTVGESILVCK 498
Query: 327 TMQDFLRFSSMMNAGPEPISSHMDP-------PTLVDLILEVVAANLCSSLEDVKTLIKH 379
+ + +++ +P+ S + ++V ILE++ + S+ +D++T
Sbjct: 499 NSEKS-KGVALLQGSLKPVRSCLRKLEGEEVTASMVRAILEIIVGRVASTSQDMETYASC 557
Query: 380 TLF----------YQLKSPEDQQTFLETTL-----SEIVASLLASKGTMLTMNEAGHLSL 424
T Q Q +E + +E + AS GT E
Sbjct: 558 TFLAASMKEGKQGIQKNQDSGQLGAIEACVMWLLENEFIQITEASDGT-----EGKIYHP 612
Query: 425 TSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEYRIPSDGILLSRS 484
T + A + + LS L I++DL F L N LH+++LV P+ D +
Sbjct: 613 TQLGSATLSSSLSPTDTLDIFADLQRAMKGFVLENDLHIVYLVTPMF----EDWTTIDWY 668
Query: 485 KVYDRYTKFHPQTLRVAEALGVTENLVALNVTGKL--KDEKK----ALLCRFFHACILYD 538
+ + + K RVAE +GV E +A V GK+ + E++ A+ RFF + +L D
Sbjct: 669 RFFCLWEKLPTSMKRVAELVGVEEGFLARCVKGKVIARTERQHRQMAIHKRFFTSLVLLD 728
Query: 539 VLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELWCYKQ-LLTDLPQTL 597
+++ +++ + YG +Q+ + +A + F L W + LL+ + L
Sbjct: 729 LISEVPLKEINQKYGCNRGQIQSLQQSAAVYAGMITVFSNRLG--WHNMELLLSQFQKRL 786
Query: 598 MYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIARADAKEMVAKIRH-LPLRSAR 654
+ L L+ + + RAR L +G+ ++ +ARA E+ +++ P +S R
Sbjct: 787 TFGIQRELCDLVRISLLNAQRARFLYASGFLTVADLARATIAEVEVVLKNAAPFKSTR 844
>gi|17933644|ref|NP_524333.1| mutagen-sensitive 308 [Drosophila melanogaster]
gi|2340084|gb|AAB67306.1| Mus308 [Drosophila melanogaster]
gi|7299675|gb|AAF54858.1| mutagen-sensitive 308 [Drosophila melanogaster]
gi|201065649|gb|ACH92234.1| FI03732p [Drosophila melanogaster]
Length = 2059
Score = 228 bits (582), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 189/660 (28%), Positives = 322/660 (48%), Gaps = 61/660 (9%)
Query: 25 GVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGP 84
G G Y P + ICTIEK + ++ L+++ +++ IG++V+DE H++++ RG
Sbjct: 311 GFYGGYTPPG-GFESLHVAICTIEKANSIVNKLMEQGKLETIGMVVVDEVHLISDKGRGY 369
Query: 85 ILECVVSKVLYLKK----SIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVD 140
ILE +++K+LY+ + IQ+ MSAT+ N+ L ++++ Y+ N RP E + V
Sbjct: 370 ILELLLAKILYMSRRNGLQIQVITMSATLENVQLLQSWLDAELYITNYRPVALKEMIKVG 429
Query: 141 KRVFQSFDGKSLTEIYADN-LDYSLTGSGPDAVLHLVQGNL---MVLIFCSSKIACSNLA 196
++ K + ++ L L D L ++ L V++FC SK C NLA
Sbjct: 430 TVIY-DHRLKLVRDVAKQKVLLKGLENDSDDVALLCIETLLEGCSVIVFCPSKDWCENLA 488
Query: 197 L------------------RLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECI 238
+ RL+ + P KQ+ D+ L DG +S + I
Sbjct: 489 VQLATAIHVQIKSETVLGQRLRTNLNPRAIAEVKQQLRDIPTGL----DGVMS----KAI 540
Query: 239 LYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGRDFI 298
Y A+HHA LT ER +IE ++ AG L+++ TSTL++GVNLPA+RV+IR G +
Sbjct: 541 TYACAFHHAGLTTEERDIIEASFKAGALKVLVATSTLSSGVNLPARRVLIRSPLFGGKQM 600
Query: 299 SLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISS--HMDPPT-LV 355
S Y+QM+GRAGR G GESI++C + + ++ + +PI+S MD T L
Sbjct: 601 SSLTYRQMIGRAGRMGKDTLGESILICNEINARM-GRDLVVSELQPITSCLDMDGSTHLK 659
Query: 356 DLILEVVAANLCSSLEDVKTLIKHTL------FYQLKSPEDQQTFLETTLSEIVASLLAS 409
+LEV+++ + ++ ED+ + TL F+ + P D+++ +++ + L+
Sbjct: 660 RALLEVISSGVANTKEDIDFFVNCTLLSAQKAFHAKEKPPDEESD-ANYINDALDFLVEY 718
Query: 410 KGTMLTMNEAGHLSL---TSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFL 466
+ L NE ++ T + A + + + LI++++L ++ +F L + LH ++L
Sbjct: 719 EFVRLQRNEERETAVYVATRLGAACLASSMPPTDGLILFAELQKSRRSFVLESELHAVYL 778
Query: 467 VIPLE--YRIPSDGILLSRSKVYDRYTKFHPQTLRVAEALGVTENLV--ALNVTGKLKDE 522
V P Y++ LL + K +V E +GV + + AL KL +
Sbjct: 779 VTPYSVCYQLQDIDWLL----YVHMWEKLSSPMKKVGELVGVRDAFLYKALRGQTKLDYK 834
Query: 523 KKALLCRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPE 582
+ + RF+ A L +++N V Y LQ+ + S FA V FC L
Sbjct: 835 QMQIHKRFYIALALEELVNETPINVVVHKYKCHRGMLQSLQQMASTFAGIVTAFCNSLQ- 893
Query: 583 LWCYKQLL-TDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIARADAKEM 641
W L+ + L + +L LM +P + RAR L +AG +SL +A AD E+
Sbjct: 894 -WSTLALIVSQFKDRLFFGIHRDLIDLMRIPDLSQKRARALFDAGITSLVELAGADPVEL 952
>gi|60678001|gb|AAX33507.1| LP14642p [Drosophila melanogaster]
Length = 2059
Score = 228 bits (581), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 189/660 (28%), Positives = 322/660 (48%), Gaps = 61/660 (9%)
Query: 25 GVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGP 84
G G Y P + ICTIEK + ++ L+++ +++ IG++V+DE H++++ RG
Sbjct: 311 GFYGGYTPPG-GFESLHVAICTIEKANSIVNKLMEQGKLETIGMVVVDEVHLISDKGRGY 369
Query: 85 ILECVVSKVLYLKK----SIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVD 140
ILE +++K+LY+ + IQ+ MSAT+ N+ L ++++ Y+ N RP E + V
Sbjct: 370 ILELLLAKILYMSRRNGLQIQVITMSATLENVQLLQSWLDAELYITNYRPVALKEMIKVG 429
Query: 141 KRVFQSFDGKSLTEIYADN-LDYSLTGSGPDAVLHLVQGNL---MVLIFCSSKIACSNLA 196
++ K + ++ L L D L ++ L V++FC SK C NLA
Sbjct: 430 TVIY-DHRLKLVRDVAKQKVLLKGLENDSDDVALLCIETLLEGCSVIVFCPSKDWCENLA 488
Query: 197 L------------------RLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECI 238
+ RL+ + P KQ+ D+ L DG +S + I
Sbjct: 489 VQLATAIHVQIKSETVLGQRLRTNLNPRAIAEVKQQLRDIPTGL----DGVMS----KAI 540
Query: 239 LYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGRDFI 298
Y A+HHA LT ER +IE ++ AG L+++ TSTL++GVNLPA+RV+IR G +
Sbjct: 541 TYACAFHHAGLTTEERDIIEASFKAGALKVLVATSTLSSGVNLPARRVLIRSPLFGGKQM 600
Query: 299 SLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISS--HMDPPT-LV 355
S Y+QM+GRAGR G GESI++C + + ++ + +PI+S MD T L
Sbjct: 601 SSLTYRQMIGRAGRMGKDTLGESILICNEINARM-GRDLVVSELQPITSCLDMDGSTHLK 659
Query: 356 DLILEVVAANLCSSLEDVKTLIKHTL------FYQLKSPEDQQTFLETTLSEIVASLLAS 409
+LEV+++ + ++ ED+ + TL F+ + P D+++ +++ + L+
Sbjct: 660 RALLEVISSGVANTKEDIDFFVNCTLLSAQKAFHAKEKPPDEESD-ANYINDALDFLVEY 718
Query: 410 KGTMLTMNEAGHLSL---TSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFL 466
+ L NE ++ T + A + + + LI++++L ++ +F L + LH ++L
Sbjct: 719 EFVRLQRNEERETAVYVATRLGAACLASSMPPTDGLILFAELQKSRRSFVLESELHAVYL 778
Query: 467 VIPLE--YRIPSDGILLSRSKVYDRYTKFHPQTLRVAEALGVTENLV--ALNVTGKLKDE 522
V P Y++ LL + K +V E +GV + + AL KL +
Sbjct: 779 VTPYSVCYQLQDIDWLL----YVHMWEKLSSPMKKVGELVGVRDAFLYKALRGQTKLDYK 834
Query: 523 KKALLCRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPE 582
+ + RF+ A L +++N V Y LQ+ + S FA V FC L
Sbjct: 835 QMQIHKRFYIALALEELVNETPINVVVHKYKCHRGMLQSLQQMASTFAGIVTAFCNSLQ- 893
Query: 583 LWCYKQLL-TDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIARADAKEM 641
W L+ + L + +L LM +P + RAR L +AG +SL +A AD E+
Sbjct: 894 -WSTLALIVSQFKDRLFFGIHRDLIDLMRIPDLSQKRARALFDAGITSLVELAGADPVEL 952
>gi|195571337|ref|XP_002103660.1| GD20545 [Drosophila simulans]
gi|194199587|gb|EDX13163.1| GD20545 [Drosophila simulans]
Length = 1025
Score = 228 bits (580), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 183/658 (27%), Positives = 321/658 (48%), Gaps = 63/658 (9%)
Query: 25 GVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGP 84
G G Y P + ICTIEK + ++ L+++ +++ IG++V+DE H++++ RG
Sbjct: 307 GFYGGYTPPG-GFESLDVAICTIEKANSIVNKLMEQGKLETIGMVVVDEVHLISDKGRGY 365
Query: 85 ILECVVSKVLYLKK----SIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVD 140
ILE +++K+LY+ + IQ+ MSAT+ N+ L ++++ Y+ + RP E + V
Sbjct: 366 ILELLLAKILYMSRRNGLQIQVITMSATLANVQLLQSWLDAELYITHYRPVALKEMIKVG 425
Query: 141 KRVFQSFDGKSLTEIYADNLDY--SLTGSGPDAVLHLVQGNL---MVLIFCSSKIACSNL 195
++ L A ++ L D L ++ L V++FC SK C NL
Sbjct: 426 TVIYDH--SLKLIRDVAKEKEFLKGLENDSDDVALLCIETLLEGCSVIVFCPSKDWCENL 483
Query: 196 AL------------------RLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEEC 237
A+ RL+ + P KQ+ D+ L D +S +
Sbjct: 484 AVQLATAIHGQIKSGTVLGQRLRANLDPRAIAEVKQQLRDIPTGL----DAVMS----KA 535
Query: 238 ILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGRDF 297
I Y A+HHA LT ER ++E ++ AG L+++ TSTL++GVNLPA+RV+IR G
Sbjct: 536 ITYACAFHHAGLTTEERDIVEASFKAGALKVLVATSTLSSGVNLPARRVLIRSPLFGGKQ 595
Query: 298 ISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISS--HMDPPT-L 354
+S Y+QM+GRAGR G GESI++C + + ++ + +PI+S MD T L
Sbjct: 596 MSSLTYRQMIGRAGRMGKDTLGESILICNEINARMG-RDLVLSDLQPITSCLDMDGSTHL 654
Query: 355 VDLILEVVAANLCSSLEDVKTLIKHTL------FYQLKSPEDQQTFLETTLSEIVASLLA 408
+LEV+++ + ++ ED+ + TL F+ + P D++ + +++ + L+
Sbjct: 655 KRALLEVISSGVANTKEDIDFFVNCTLLSAEKDFHAKEKPPDEEPD-DNYINDALDFLVE 713
Query: 409 SKGTMLTMNEAGHLSL---TSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLF 465
+ L NE ++ T + A + + + LI++++L ++ +F L + LH ++
Sbjct: 714 YEFVRLQRNEEKETAVYVATRLGAACLASSMPPTDGLILFAELQKSRRSFVLESELHAVY 773
Query: 466 LVIPLE--YRIPSDGILLSRSKVYDRYTKFHPQTLRVAEALGVTENLVALNVTGKLKDEK 523
LV P Y++ LL + + K +V E +GV + ++ + G+ K +
Sbjct: 774 LVTPYSVCYQLQDLDWLL----YVNMWEKLSSPMKKVGELVGVRDAFLSKALRGQTKLDY 829
Query: 524 KALLC--RFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELP 581
K + RF+ A L +++N V + LQ+ + + FA V FC L
Sbjct: 830 KQMQIHKRFYIALALEELVNETPINVVVHKFKCHRGMLQSLQQMAATFAGIVTAFCNSLQ 889
Query: 582 ELWCYKQLL-TDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIARADA 638
W L+ + L + +L LM +P + RAR L +AG +SL +A ADA
Sbjct: 890 --WSTLALIVSQFKDRLFFGIQRDLIDLMRIPDLSQKRARALFDAGITSLVELAGADA 945
>gi|195329438|ref|XP_002031418.1| GM25985 [Drosophila sechellia]
gi|194120361|gb|EDW42404.1| GM25985 [Drosophila sechellia]
Length = 2006
Score = 228 bits (580), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 184/662 (27%), Positives = 325/662 (49%), Gaps = 71/662 (10%)
Query: 25 GVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGP 84
G G Y P + ICTIEK + ++ L+++ +++ IG++V+DE H++++ RG
Sbjct: 307 GFYGGYTPPG-GFESLDVAICTIEKANSIVNKLMEQGKLETIGMVVVDEVHLISDKGRGY 365
Query: 85 ILECVVSKVLYLKK----SIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVD 140
ILE +++K+LY+ + IQ+ MSAT+ N+ L ++++ Y+ N RP E + V
Sbjct: 366 ILELLLAKILYMSRRNGLQIQVITMSATLANVQLLQSWLDAELYITNYRPVALKEMIKVG 425
Query: 141 KRVFQ---------SFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIA 191
++ + + + L + D+ D +L + L++G V++FC SK
Sbjct: 426 TVIYDHRLKLIRDVAKEKEFLKGLENDSDDVALL-----CIETLLEG-CSVIVFCPSKDW 479
Query: 192 CSNLAL------------------RLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTN 233
C NLA+ RL+ + P KQ+ D+ L D +S
Sbjct: 480 CENLAVQLATAIHGQIKSGTVLGQRLRANLDPRAIAEVKQQLRDIPTGL----DAVMS-- 533
Query: 234 LEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYV 293
+ I Y A+HHA LT ER ++E ++ AG L+++ TSTL++GVNLPA+RV+IR
Sbjct: 534 --KAITYACAFHHAGLTTEERDIVEASFKAGALKVLVATSTLSSGVNLPARRVLIRSPLF 591
Query: 294 GRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISS--HMDP 351
G +S Y+QM+GRAGR G GESI++C + + ++ + +PI+S MD
Sbjct: 592 GGKPMSSLTYRQMIGRAGRMGKDTLGESILICNEINARM-GRDLVLSDLQPITSCLDMDG 650
Query: 352 PT-LVDLILEVVAANLCSSLEDVKTLIKHTL------FYQLKSPEDQQTFLETTLSEIVA 404
T L +LEV+++ + ++ ED+ + TL F+ + P D++ +++ +
Sbjct: 651 STHLKRALLEVISSGVANTKEDIDFFVNCTLLSAEKAFHAKEKPPDEEPD-ANYINDALD 709
Query: 405 SLLASKGTMLTMNEAGHLSL---TSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSL 461
L+ + L NE ++ T + A + + + LI++++L ++ +F L + L
Sbjct: 710 FLVEYEFVRLQRNEEKETAVYVATRLGAACLASSMPPTDGLILFAELQKSRRSFVLESEL 769
Query: 462 HMLFLVIPLE--YRIPSDGILLSRSKVYDRYTKFHPQTLRVAEALGVTENLVALNVTGKL 519
H ++LV P Y++ LL + + K +V E +GV + ++ + G+
Sbjct: 770 HAVYLVTPYSVCYQLQDLDWLL----YVNMWEKLTSPMKKVGEIVGVRDAFLSKALRGQT 825
Query: 520 KDEKKALLC--RFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFC 577
K + K + RF+ A L +++N V + LQ+ + + FA V FC
Sbjct: 826 KLDYKQMQIHKRFYIALALEELVNETPINVVVHKFKCHRGMLQSLQQMAATFAGIVTAFC 885
Query: 578 EELPELWCYKQLL-TDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIARA 636
L W L+ + L + +L LM +P + RAR L +AG +SL +A A
Sbjct: 886 NSLQ--WSTLALIVSQFKDRLFFGIQRDLIDLMRIPDLSQKRARALFDAGITSLVELAGA 943
Query: 637 DA 638
DA
Sbjct: 944 DA 945
>gi|338716239|ref|XP_001502374.3| PREDICTED: DNA polymerase theta [Equus caballus]
Length = 2598
Score = 228 bits (580), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 196/707 (27%), Positives = 340/707 (48%), Gaps = 78/707 (11%)
Query: 13 AEEFKFYLE---EYAGVK-----GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRID 64
A+E K+YL+ + G+K G PT + I +CTIE+ + L+ LI+EN++D
Sbjct: 156 AKEKKYYLQSLFQEVGIKVDGYMGSTSPTG-PFSSLDIAVCTIERANGLVNRLIEENKMD 214
Query: 65 EIGLIVIDEFHMLNEPQRGPILECVVSKVLY---------------LKKSIQIFAMSATI 109
+G++V+DE HML + RG +LE +++K+ Y L ++QI MSAT+
Sbjct: 215 LLGMVVVDELHMLGDSHRGYLLELLLTKICYITQKSASRQAHLSSPLSNAVQIVGMSATL 274
Query: 110 GNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGP 169
N+ +++++ Y N RP E V + ++ S L + L
Sbjct: 275 PNLELVASWLNAELYHTNFRPVPLLESVKIGNSIYDS--SMKLVREFQPTLQVK---GDE 329
Query: 170 DAVLHL----VQGNLMVLIFCSSKIACSNLA---------LRLQFDRFPGTKEYKKQ--E 214
D ++ L V+ N VL+FC SK C LA L Q + + E E
Sbjct: 330 DHIVSLCYETVRDNHSVLLFCPSKKWCEKLADTIAREFYNLHHQAEGLVRSSELPPVILE 389
Query: 215 KEDLIEALKE--ENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCT 272
++ L+E + + + L T L++ + +GVA+HHA LT ER +IE A+ ++++ T
Sbjct: 390 QKGLLEVMDQLRRSPSGLDTVLQKTVPWGVAFHHAGLTFEERDIIEGAFRQSQIRVLAAT 449
Query: 273 STLAAGVNLPAQRVIIRDSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFL 332
STL++GVNLPA+RVIIR + + YKQMVGRAGR G+ GESI++CK +
Sbjct: 450 STLSSGVNLPARRVIIRTPIFSGRPLDILTYKQMVGRAGRKGVDTVGESILVCKNSEKSE 509
Query: 333 RFSSMMNAGPEPISSHMD-------PPTLVDLILEVVAANLCSSLEDVKTLIKHT-LFYQ 384
+++ +P+ S + +++ ILEV+ + S+ +D++T T L
Sbjct: 510 GI-ALLQGSLKPVCSCLRRREGEEVTASMIRAILEVIVGGVASTSQDMQTYASCTFLAAS 568
Query: 385 LKS-----PEDQQTFLETTLSEIVASLLASKGTMLT----MNEAGHLSLTSIAKAAVQAG 435
+K ++Q + + V LL ++ +T E T + A + +
Sbjct: 569 MKDGKQGIQKNQDSLQLGAIEACVMWLLENEFIQITEASDRTEGKVYHPTHLGSATLSSS 628
Query: 436 LSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEYRIPSDGILLSRSKVYDRYTKFHP 495
L+ L I++DL F L N LH+++LV P+ D + + + + K
Sbjct: 629 LAPTDTLDIFADLQRAMKGFVLENDLHIVYLVTPMF----EDWTTIDWYRFFCLWEKLPT 684
Query: 496 QTLRVAEALGVTENLVALNVTGKL--KDEKK----ALLCRFFHACILYDVLNFDNHQKVA 549
RVAE +GV E +A V GK+ + E++ A+ RFF + +L D+++ +++
Sbjct: 685 SMKRVAELVGVEEGFLARCVKGKVVARTERQHRQMAIHKRFFTSLVLLDLISEVPLKEIN 744
Query: 550 KMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELWCYKQ-LLTDLPQTLMYCRAPNLRAL 608
+ YG +Q+ + +A + F L W + LL+ + L + L L
Sbjct: 745 QKYGCNRGQIQSLQQSAAVYAGMITVFSNRLG--WHNMELLLSQFQKRLTFGIQRELCDL 802
Query: 609 MDLPGVKIGRARQLLNAGYSSLELIARADAKEMVAKIRH-LPLRSAR 654
+ + + RAR L +G+ ++ +ARA+ E+ +++ P +SAR
Sbjct: 803 IRVSLLNAQRARFLYASGFLTVADLARANIAEVETVLKNAAPFKSAR 849
>gi|367043996|ref|XP_003652378.1| hypothetical protein THITE_2065919 [Thielavia terrestris NRRL 8126]
gi|346999640|gb|AEO66042.1| hypothetical protein THITE_2065919 [Thielavia terrestris NRRL 8126]
Length = 936
Score = 228 bits (580), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 180/639 (28%), Positives = 301/639 (47%), Gaps = 52/639 (8%)
Query: 42 IYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQ 101
I +CTIEK + L+ + I++ I + +++DE HM+++ RG +LE + +KVL L + +Q
Sbjct: 261 IAVCTIEKANSLVNAAIEDCSISSLRAVILDECHMIDDGYRGYLLELMATKVLCLGQPVQ 320
Query: 102 IFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLD 161
I MSAT+ NI L +++G +Y + RP E++ + +++ + SL + + LD
Sbjct: 321 IIGMSATLTNIELLKNWLQGHSYETHYRPVPIDEHLVYEGKIYAAGTTASLLKT-VNQLD 379
Query: 162 YSLTGSGP-----------------DAVLHLV--------QGNLMVLIFCSSKIACSNLA 196
S P DAV + V + VL+F SS+ C + A
Sbjct: 380 SRSQFSEPRVQPLRIIRPSDHKELKDAVRNAVVALANEAARAGYGVLVFSSSRAGCESDA 439
Query: 197 LRLQ--FDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHH-ADLTAGE 253
+ + F ++++ DL+ L+ + G L LE+ I +GVA+H A LT E
Sbjct: 440 ILISRVMPMFAEVDPATQEKRLDLLGDLRSLSTG-LDPKLEQTIPFGVAFHRKAGLTTEE 498
Query: 254 RRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGRDFISLNMYKQMVGRAGRT 313
R LI AY G L++ T +LAAG+NLPA+RVI+ D+ +GRDF+ M +QM GRAGR
Sbjct: 499 RELITSAYDRGVLKVCVATCSLAAGINLPARRVILHDARMGRDFVGPAMLRQMRGRAGRK 558
Query: 314 GLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHM--DPPTLVDLILEVVAANLCSSLE 371
G E GE+ + C+ D +M+A ISS + D + +LEV+A L +S E
Sbjct: 559 GKDEVGETYLCCR-QNDLEDVVDLMHADLPQISSCLISDQRRIRRALLEVIAIRLATSRE 617
Query: 372 DVKTLIKHTLFYQLKSPEDQQTFLETTLSEIVASLLASKGTMLTMNEAGHLSLTSIAKAA 431
+ + T+ P+ + +ET + E+ K +T + G T + KA
Sbjct: 618 SLDDYVSKTMLALSAEPDSIRQSIETGIDEL------RKMEFITRGDDGSFHATRLGKAV 671
Query: 432 VQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEYRIPSDGILLSRSKVYDRYT 491
V + L + L ++++L F + +H+L+ P+ G ++ ++
Sbjct: 672 VASSLDPEDGLFVHNELKKALQAFVMDGEMHVLYNFTPVH---DMGGGTVNWRVFWNEMQ 728
Query: 492 KFHPQTLRVAEALG-----VTENLVALNVTGKLKDEKKAL--LCRFFHACILYDVLNFDN 544
+ LRV LG V + L ++ +EK+ RF+ A L D+ N
Sbjct: 729 QLDDSGLRVMHFLGLKPVTVNKMLHGGTLSESTSEEKEVARRYHRFYLALQLRDLCNEMP 788
Query: 545 HQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELW-CYKQLLTDLPQTLMYCRAP 603
+VA+ Y + +Q FA+ + +FCE + W L L
Sbjct: 789 IHRVAQKYDVPRGSVQTLAQTCQGFAAGMIKFCETMG--WGAMAAALDHFSDRLRAGARS 846
Query: 604 NLRALMDLPGVKIGRARQLLNAGYSSLELIARADAKEMV 642
+L AL + VK AR + G+ ++ +A AD KE++
Sbjct: 847 DLLALAKITFVKSRTARIFWDNGFKTIAAVANADPKELL 885
>gi|212540008|ref|XP_002150159.1| DNA-directed DNA polymerase theta, putative [Talaromyces marneffei
ATCC 18224]
gi|210067458|gb|EEA21550.1| DNA-directed DNA polymerase theta, putative [Talaromyces marneffei
ATCC 18224]
Length = 943
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 184/643 (28%), Positives = 299/643 (46%), Gaps = 62/643 (9%)
Query: 42 IYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQ 101
I ICTIEK + L+ + I+E ID++ ++V+DE HML++ RG +LE +V+K+L L++ IQ
Sbjct: 268 IAICTIEKANALVNTAIEECNIDDLAVVVVDEIHMLDDDSRGYLLELMVTKLLLLQQDIQ 327
Query: 102 IFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLD 161
I MSAT+ N L+ +I + RP EY+ + ++ + K + A L
Sbjct: 328 IIGMSATLSNTQLLADWIHASFHASTHRPVPIEEYLVYENSIYPAISSKEFFQT-ATKLQ 386
Query: 162 YSLTGSGP--DAV-------------LHLVQGNLMV-------------LIFCSSKIACS 193
SGP DAV L L N MV L+FC S+ AC
Sbjct: 387 -----SGPVQDAVPPCRKIDPSPFKPLSLPTANAMVSLAIETATAGFGALVFCGSRHACQ 441
Query: 194 -NLALRLQFDRFPGTKEYKKQEKE-DLIEALKEENDGKLSTNLEECILYGVAYHHADLTA 251
N L + P T + + E+ DL+ L G L + I+ GVA+HHA LT
Sbjct: 442 MNAQLISEAMPSPSTLDAELLERRLDLVAELGSLPCG-LDPVFQNTIIKGVAFHHAGLTT 500
Query: 252 GERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGRDFISLNMYKQMVGRAG 311
ER L+ EAY GT+++I T +LAAGVNLPA+RVI++ + +GRD + + +QM GRAG
Sbjct: 501 EERELVAEAYDRGTIKVIVATCSLAAGVNLPARRVIMQGARMGRDIVGPALLRQMRGRAG 560
Query: 312 RTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHM--DPPTLVDLILEVVAANLCSS 369
R G GE+ ++C+ D S + +A I S + D + +LE +A L S
Sbjct: 561 RKGKDTVGETYLICQ-QADLEVISEIWDAETPAIDSCLAQDNKGVKRALLEGIATRLVSG 619
Query: 370 LEDVKTLIKHTLFYQLKSPEDQQTFLETTLSEIVASLLASKGTMLTMNEAGHLSLTSIAK 429
E + ++ TL + + + + +ET+L E+V + ++ + + T +
Sbjct: 620 REAIDEFMRCTLLCKTREEAEIEKLIETSLQELVNT------DLIRLRDDDSYESTKLGA 673
Query: 430 AAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEYRIPSD-GILLSRSKVYD 488
A V + S D + +Y +L F + +H+ ++ PL + ++ L+ R D
Sbjct: 674 AIVASSFSPDDGIFVYEELKRALQAFVMDGEMHIFYMFTPLSVAMNTNIDWLIFR----D 729
Query: 489 RYTKFHPQTLR----VAEALGVTENLVALNVTGKLKDEKKALLCRFFH----ACILYDVL 540
+ + +R V G N+V K D K+ L R + A L D+
Sbjct: 730 QLDQLDESGIRALLFVGVQPGFVNNMVQTGRNFKEDDPKQLQLSRIYRRAYAAFQLRDLS 789
Query: 541 NFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELW-CYKQLLTDLPQTLMY 599
N +A Y + +Q FA+ + +FC+ + W +L + L
Sbjct: 790 NEVPLSTIASRYNVPRGVVQTLAQTCHGFAAGMVKFCQRMG--WGMLAVVLEHMRDRLQA 847
Query: 600 CRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIARADAKEMV 642
+L + + VK AR L G+ S+ +A DAK+++
Sbjct: 848 GARDDLLEMAQVTHVKSWTARLLWENGFRSVRALASTDAKDII 890
>gi|70990852|ref|XP_750275.1| DNA-directed DNA polymerase theta [Aspergillus fumigatus Af293]
gi|66847907|gb|EAL88237.1| DNA-directed DNA polymerase theta, putative [Aspergillus fumigatus
Af293]
gi|159130748|gb|EDP55861.1| DNA-directed DNA polymerase theta, putative [Aspergillus fumigatus
A1163]
Length = 940
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 177/640 (27%), Positives = 298/640 (46%), Gaps = 53/640 (8%)
Query: 42 IYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQ 101
I +CTIEK + LI + ++E I ++G++V+DE HML++ RG ILE +V+K+L L++ IQ
Sbjct: 261 IAVCTIEKANSLINTAVEECSIGDLGVVVLDELHMLDDENRGYILELMVTKLLLLQQDIQ 320
Query: 102 IFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYA---D 158
I MSAT+ N L+ ++ ++ RP EY+ + ++ + + L +
Sbjct: 321 IIGMSATLSNTELLADWMNAKYFISTYRPVPIDEYLVYENAIYPAATSRQLFQTITRLKS 380
Query: 159 NLDYSLTGSGPDAVL-----HLVQGNLMV-----------------LIFCSSKIACSNLA 196
SLT + P + H N M L+FC S+ C ++
Sbjct: 381 MKTISLTDTIPPHRMIQCSKHRELANPMTNAMVALAVDTAAAGYGALVFCGSRQGC-QIS 439
Query: 197 LRLQFDRFPGTKEYKKQE---KEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGE 253
+ + P + E + DL+ L+ G L LE IL GV +HHA +T E
Sbjct: 440 AGIISEAMPAVSGLEADELSKRLDLLADLRSLPSG-LDPVLENTILKGVGFHHAGMTTEE 498
Query: 254 RRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGRDFISLNMYKQMVGRAGRT 313
R LI +AY G L++I T +LAAGVNLPA+RVII + +GR+ + M +QM GRAGR
Sbjct: 499 RELIAQAYDQGVLKVIVATCSLAAGVNLPARRVIINGARMGRELVGPAMLRQMCGRAGRK 558
Query: 314 GLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPT--LVDLILEVVAANLCSSLE 371
G +GE+ ++C D ++ A I S + P L +LE +A L S E
Sbjct: 559 GKDNTGETYLICGKA-DIQAVCDLLEADMPAIESCLAPEKRGLKRALLEAIATGLVSGCE 617
Query: 372 DVKTLIKHTLFYQLKSPEDQQTFLETTLSEIVASLLASKGTMLTMNEAGHLSLTSIAKAA 431
+K +K TL Y+ + + ++++L E++ +L E + T + +A
Sbjct: 618 AIKEYVKCTLLYRTVDKKIASSIMQSSLQELIDE------GLLVFKEDESYAATKLGQAV 671
Query: 432 VQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEYRIPSD-GILLSRSKVYDRY 490
V + + + L +Y +L F + +H+ ++ P++ + + L+ R ++
Sbjct: 672 VASAFAPEDGLFVYEELKRALRAFVMDGDMHVFYMFTPIQVAMNTQIDWLIFREQL---- 727
Query: 491 TKFHPQTLRVAEALGVTENLVALNVT--GKLKDE------KKALLCRFFHACILYDVLNF 542
LR + +GV V L V G LK++ + + R + A L D+ N
Sbjct: 728 DNLDESGLRALQFVGVQPYFVNLMVQSGGSLKEDNPEQIKQATIYRRAYTAFQLRDLSNE 787
Query: 543 DNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELWCYKQLLTDLPQTLMYCRA 602
+A Y I +Q FA+ + +FC+ + + +L + L
Sbjct: 788 VPLSTIASRYNIPRGAVQTLAQQCHGFAAGMVKFCQRM-DWGMLAAVLDHMRDRLEAGAR 846
Query: 603 PNLRALMDLPGVKIGRARQLLNAGYSSLELIARADAKEMV 642
+L + + VK AR L G+ +L +A ADAK++V
Sbjct: 847 ADLLEMAQVTYVKGWTARLLRENGFRNLRDLAGADAKDLV 886
>gi|119496737|ref|XP_001265142.1| DNA-directed DNA polymerase theta, putative [Neosartorya fischeri
NRRL 181]
gi|119413304|gb|EAW23245.1| DNA-directed DNA polymerase theta, putative [Neosartorya fischeri
NRRL 181]
Length = 940
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 176/640 (27%), Positives = 299/640 (46%), Gaps = 53/640 (8%)
Query: 42 IYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQ 101
I +CTIEK + LI S ++E I ++G++V+DE HML++ RG ILE +V+K+L L++ IQ
Sbjct: 261 IAVCTIEKANSLINSAVEECSIGDLGVVVLDELHMLDDEHRGYILELMVTKLLLLQQDIQ 320
Query: 102 IFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYA---D 158
I MSAT+ N L+ ++ + ++ RP EY+ + ++ + + L +
Sbjct: 321 IIGMSATLSNTELLADWMNAMYFISTYRPVPIDEYLVYENAIYPAATSRQLFQTITRLKS 380
Query: 159 NLDYSLTGSGPDAVL-----HLVQGNLMV-----------------LIFCSSKIACSNLA 196
SLT + P + H N M L+FC S+ C ++
Sbjct: 381 MKTISLTDTIPPHRMIQCSKHRELANPMTNAMVALAVDTAAAGYGALVFCGSRQGC-QIS 439
Query: 197 LRLQFDRFPGTKEYKKQE---KEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGE 253
+ + P + E + DL+ L+ G L LE IL GV +HHA +T E
Sbjct: 440 AGIISEAMPAVSGLEADELSKRLDLLADLRSLPSG-LDPVLENTILKGVGFHHAGMTTEE 498
Query: 254 RRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGRDFISLNMYKQMVGRAGRT 313
R LI +AY G L++I T +LAAGVNLPA+RVII + +GR+ + M +QM GRAGR
Sbjct: 499 RELIAQAYDQGVLKVIVATCSLAAGVNLPARRVIINGARMGRELVGPAMLRQMCGRAGRK 558
Query: 314 GLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPT--LVDLILEVVAANLCSSLE 371
G +GE+ ++C + D ++ A I S + P L +LE +A L S E
Sbjct: 559 GKDNAGETYLICGKV-DIQAVCDLLEADMPAIESCLAPEKRGLKRALLEAIATGLVSGCE 617
Query: 372 DVKTLIKHTLFYQLKSPEDQQTFLETTLSEIVASLLASKGTMLTMNEAGHLSLTSIAKAA 431
+K +K TL Y+ + + ++++L +++ +L E T + +A
Sbjct: 618 AIKEYVKCTLLYRTVDKKIASSIMQSSLQDLIDE------GLLIFKEDESYQATKLGQAV 671
Query: 432 VQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEYRIPSD-GILLSRSKVYDRY 490
V + + + L +Y +L F + +H+ ++ P++ + + L+ R ++
Sbjct: 672 VASAFAPEDGLFVYEELKRALRAFVMDGDMHIFYMFTPIQVAMNTQIDWLIFREQL---- 727
Query: 491 TKFHPQTLRVAEALGVTENLVALNVT--GKLKDE------KKALLCRFFHACILYDVLNF 542
LR + +GV V L V G LK++ + + R + A L D+ N
Sbjct: 728 DNLDESGLRALQFVGVQPYFVNLMVQSGGSLKEDNPEQIKQATIYRRAYTAFQLRDLSNE 787
Query: 543 DNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELWCYKQLLTDLPQTLMYCRA 602
+A Y I +Q FA+ + +FC+ + + +L + L
Sbjct: 788 VPLSTIASRYNIPRGAVQTLAQQCHGFAAGMVKFCQRM-DWGMLAAVLDHMRDRLEAGAR 846
Query: 603 PNLRALMDLPGVKIGRARQLLNAGYSSLELIARADAKEMV 642
+L + + VK AR L G+ +L +A A+AK++V
Sbjct: 847 ADLLEMAQVTYVKGWTARLLRENGFRNLRDLAEAEAKDLV 886
>gi|13892061|gb|AAK39635.1| DNA polymerase theta [Homo sapiens]
Length = 2724
Score = 226 bits (576), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 198/721 (27%), Positives = 341/721 (47%), Gaps = 105/721 (14%)
Query: 13 AEEFKFYLE---EYAGVK-----GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRID 64
A+E K+YL+ + G+K G P+ R + I +CTIE+ + LI LI+EN++D
Sbjct: 283 AKEKKYYLQSLFQEVGIKVDGYMGSTSPS-RHFSSLDIAVCTIERANGLINRLIEENKMD 341
Query: 65 EIGLIVIDEFHMLNEPQRGPILECVVSKVLY---------------LKKSIQIFAMSATI 109
+G++V+DE HML + RG +LE +++K+ Y L ++QI MSAT+
Sbjct: 342 LLGMVVVDELHMLGDSHRGYLLELLLTKICYITRKSASCQADLASSLSNAVQIVGMSATL 401
Query: 110 GNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSF-----DGKSLTEIYADNLDYSL 164
N+ +++++ Y + RP E V V ++ S + + + ++ D
Sbjct: 402 PNLELVASWLNAELYHTDFRPVPLLESVKVGNSIYDSSMKLVREFEPMLQVKGDE----- 456
Query: 165 TGSGPDAVLHL----VQGNLMVLIFCSSKIACSNLA--LRLQFDRFPGTKE--------- 209
D V+ L + N VL+FC SK C LA + +F E
Sbjct: 457 -----DHVVSLCYETICDNHSVLLFCPSKKWCEKLADIIAREFYNLHHQAEGEGLVKPSE 511
Query: 210 -----YKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAG 264
+++E ++++ L+ G L + L++ + +GVA+HHA LT ER +IE A+ G
Sbjct: 512 CPPVILEQKELLEVMDQLRRLPSG-LDSVLQKTVPWGVAFHHAGLTFEERDIIEGAFRQG 570
Query: 265 TLQIICCTSTLAAGVNLPAQRVIIRDSYVGRDFISLNMYKQMVGRAGRTGLQESGESIML 324
++++ TSTL++GVNLPA+RVIIR G + + YKQMVGRAGR G+ G SI++
Sbjct: 571 LIRVLAATSTLSSGVNLPARRVIIRTPIFGGRPLDILTYKQMVGRAGRKGVDTVG-SILI 629
Query: 325 CKTMQDFLRFSSMMNAGPEPISSHMD-------PPTLVDLILEVVAANLCSSLEDVKTLI 377
CK + + +++ +P+ S + +++ ILE++ + S+ +D+ T
Sbjct: 630 CKNSEKS-KGIALLQGSLKPVRSCLQRREGEEVTGSMIRAILEIIVGGVASTSQDMHTYA 688
Query: 378 KHTLFYQLKSPEDQQTFLETTLS----------------EIVASLLASKGTMLTMNEAGH 421
T F E +Q S E + S AS GT + H
Sbjct: 689 ACT-FLAASMKEGKQGIQRNQESVQLGAIEACVMWLLENEFIQSTEASDGTEGKVYHPTH 747
Query: 422 LSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEYRIPSDGILL 481
L A + + LS L I++DL F L N LH+L+LV P+ D +
Sbjct: 748 L-----GSATLSSSLSPADTLDIFADLQRAMKGFVLENDLHILYLVTPMF----EDWTTI 798
Query: 482 SRSKVYDRYTKFHPQTLRVAEALGVTENLVALNVTGKL------KDEKKALLCRFFHACI 535
+ + + K RVAE +GV E +A V GK+ + + A+ RFF + +
Sbjct: 799 DWYRFFCLWEKLPTSMKRVAELVGVEEGFLARCVKGKVVARTERQHRQMAIHKRFFTSLV 858
Query: 536 LYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELWCYKQ-LLTDLP 594
L D+++ +++ + YG +Q+ + +A + F L W + LL+
Sbjct: 859 LLDLISEVPLREINQKYGCNRGQIQSLQQSAAVYAGMITVFSNRLG--WHNMELLLSQFQ 916
Query: 595 QTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIARADAKEMVAKIRH-LPLRSA 653
+ L + L L+ + + RAR L +G+ ++ +ARA+ E+ +++ +P +SA
Sbjct: 917 KRLTFGIQRELCDLVRVSLLNAQRARVLYASGFHTVADLARANIVEVEVILKNAVPFKSA 976
Query: 654 R 654
R
Sbjct: 977 R 977
>gi|358372034|dbj|GAA88639.1| DNA-directed DNA polymerase theta [Aspergillus kawachii IFO 4308]
Length = 932
Score = 225 bits (574), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 182/660 (27%), Positives = 307/660 (46%), Gaps = 55/660 (8%)
Query: 42 IYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQ 101
I +CTIEK + LI S I+E I ++G++V+DE HML++ RG +LE +V+K+L L++ Q
Sbjct: 261 IAVCTIEKANSLINSAIEECSIGDLGVVVLDELHMLDDEHRGYLLELMVTKLLLLRQKTQ 320
Query: 102 IFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVD---------KRVFQ------S 146
I MSAT+ N L+ ++ +V RP + +Y+ + +++FQ S
Sbjct: 321 IIGMSATLSNTEMLAEWMNAAYFVSTYRPIQIDDYLVYENAIYPAATSRQLFQTISKLKS 380
Query: 147 FDGKSLTEIYADN----------LDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLA 196
+L E + L +T S + L+FC S+ C A
Sbjct: 381 MSNATLMECMPPDRVIRPSTFRELANPMTNSTVALAIDTADAGHGALVFCGSRHTCQIQA 440
Query: 197 LRLQFDRFPGTKEYKKQ--EKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGER 254
+ + P E + ++ DL+ L+ G L LE+ ++ GV +HHA +TA ER
Sbjct: 441 AVIS-EAMPAPAENTDELSKRLDLLADLRSLPSG-LDPVLEKTLVRGVGFHHAGMTAEER 498
Query: 255 RLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGRDFISLNMYKQMVGRAGRTG 314
LI +AY G L+I+ T +LAAGVNLPA+RVII + +GR+ + M +QM GRAGR G
Sbjct: 499 ELIAQAYDQGVLRILIATCSLAAGVNLPARRVIINGARMGRELVGPAMLRQMCGRAGRKG 558
Query: 315 LQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPT--LVDLILEVVAANLCSSLED 372
E+GE+ ++C D ++ A I S + P L +LE +A L S +
Sbjct: 559 KDEAGETYLICGD-SDLQAVCDLLEAEMPAIESCLAPEKRGLKRALLEAIATGLVSGHDA 617
Query: 373 VKTLIKHTLFYQLKSPEDQQTFLETTLSEIVASLLASKGTMLTMNEAGHLSLTSIAKAAV 432
+K ++ TL Y + + L E LA++G ++ +N+ S T + +A V
Sbjct: 618 IKEYVRCTLLYLTVDKRVAYGIMGSALQE-----LATEG-LVQLNDDESYSSTQLGQAVV 671
Query: 433 QAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEYRI--PSDGILLSRSKVYDRY 490
+ + + L +Y +L F + +H+ +L PL+ + P D ++ D+
Sbjct: 672 ASAFAPEDGLFVYEELRRALQAFVMDGDMHIFYLFTPLQAAMATPIDWLIFR-----DQL 726
Query: 491 TKFHPQTLRVAEALGVTENLV--------ALNVTGKLKDEKKALLCRFFHACILYDVLNF 542
LR + +GV+ V +L + + + R + A L D+ N
Sbjct: 727 DSLDESGLRALQFVGVSPGFVNTMAQSGASLKENTPEQINQARIYRRAYTAFQLRDLSNE 786
Query: 543 DNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELWCYKQLLTDLPQTLMYCRA 602
VA Y I +Q FA+ + +FC+ + +L + L
Sbjct: 787 VPLSAVANRYRIPRGAVQTLAQQCHGFAAGIVKFCQRM-NWGMLAAVLDHMRDRLEAGAR 845
Query: 603 PNLRALMDLPGVKIGRARQLLNAGYSSLELIARADAKEMVAKIRHL-PLRSARNLISAAK 661
+L + + VK AR L G+ +L +A ADAK++V + + P ++ +N + A+
Sbjct: 846 ADLLEMAQVTFVKGWTARLLRENGFRNLRALAEADAKDLVPILMMVNPRKTQKNQLHPAE 905
>gi|83767815|dbj|BAE57954.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 971
Score = 225 bits (573), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 186/679 (27%), Positives = 307/679 (45%), Gaps = 62/679 (9%)
Query: 3 HEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENR 62
H++++ L K+ F+ G + T I +CTIEK + LI + I+E
Sbjct: 252 HQRWKKLQKSIRVTGFF----GGSR-----TTATWADTDIAVCTIEKANSLINTAIEECN 302
Query: 63 IDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGI 122
I ++G++V+DE HML++ RG +LE +V+K+L L++ IQI MSAT+ N L+ ++
Sbjct: 303 IGDLGVVVLDELHMLDDEHRGYLLELMVTKILLLQQDIQIIGMSATLSNTELLAEWMNAN 362
Query: 123 TYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEI---YADNLDYSLTGS-------GPDAV 172
Y+ RP +Y+ + ++ + + L + A SLT + P A
Sbjct: 363 YYISTYRPIPIDDYLVYENAIYPAATSRQLFQTITRLASMSTVSLTDTMPPHRIIQPPAF 422
Query: 173 LHLVQ--GNLMV-------------LIFCSSKIACSNLALRLQFDRFPGTKEYKKQE--- 214
L N MV L+FC S+ AC L + + P +E
Sbjct: 423 RELANPTTNAMVALSVDTAAAGYGALVFCGSRQAC-QLHASIISEAMPVPAAVDPEELSR 481
Query: 215 KEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTST 274
+ DL+ L+ G L LE ++ GV +HHA +T ER I +AY G L+++ T +
Sbjct: 482 RLDLLAELRSLPSG-LDPVLENTLVRGVGFHHAGMTTEEREFIAQAYDQGVLRVLVATCS 540
Query: 275 LAAGVNLPAQRVIIRDSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRF 334
LAAGVNLPA+RVII + +GR+ + M +QM GRAGR G E+GE+ ++C +
Sbjct: 541 LAAGVNLPARRVIINGARMGRELVGPAMLRQMCGRAGRKGKDEAGETYLICGK-SELQAV 599
Query: 335 SSMMNAGPEPISSHMDPPT--LVDLILEVVAANLCSSLEDVKTLIKHTLFYQLKSPEDQQ 392
++ A I S + P L ILE +A L S LE +K +K TL Y+ +
Sbjct: 600 CDLLEADMPAIESCLAPEKRGLKRAILEAIATGLVSGLEAIKEYVKCTLLYRTMDKKIAY 659
Query: 393 TFLETTLSEIVASLLASKGTMLTMNEAGHLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNK 452
+++ L E+V+ +L N+ T + +A V + + + L +Y +L
Sbjct: 660 NIMKSALQELVSE------DLLHQNDDESYVATQLGQAVVASAFTPEDGLFVYEELNRAL 713
Query: 453 LNFCLLNSLHMLFLVIPLEYRIPSDGILLSRSKVYDRYTKFHPQTLRVAEALGVTENLVA 512
F + +H+ ++ PL+ + + D+ LR + +GV V
Sbjct: 714 QAFVMDGDMHVFYMFTPLQVAATTQ---VDWPIFRDQLDNLDESGLRALQFIGVQPGFVN 770
Query: 513 LNVT--GKLKDEKK------ALLCRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLN 564
V LK++ + R + A L D+ N VA Y +Q
Sbjct: 771 RMVQSGASLKEDTPEQIKLAVVYRRAYTALQLRDLSNEVPLSVVASRYRTPRGAVQTLAQ 830
Query: 565 VTSYFASKVYRFCEELPELW-CYKQLLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLL 623
FA+ + +FC+ + W +L + L +L + + VK AR L
Sbjct: 831 QCHGFAAGMVKFCQRMG--WGMLAAVLDHMRDRLEAGARADLLEMAQVTYVKGWTARLLR 888
Query: 624 NAGYSSLELIARADAKEMV 642
+ G+ +L +A ADAK++V
Sbjct: 889 DNGFRNLRALAEADAKDLV 907
>gi|444727047|gb|ELW67555.1| DNA polymerase theta [Tupaia chinensis]
Length = 2536
Score = 225 bits (573), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 196/719 (27%), Positives = 346/719 (48%), Gaps = 96/719 (13%)
Query: 13 AEEFKFYLE---EYAGVK-----GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRID 64
A+E K+YL+ + G+K G PT + I +CTIE+ + LI LI+EN++D
Sbjct: 160 AKEKKYYLQSLFQEVGIKVDGYVGSTSPTG-HFSSLDIAVCTIERANGLINRLIEENKMD 218
Query: 65 EIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKK---------------SIQIFAMSATI 109
+G++V+DE HML + RG +LE +++K+ Y+ + +QI MSAT+
Sbjct: 219 LLGMVVVDELHMLGDSHRGYLLELLLTKICYITQKSASCQADLVSPLFNGVQIVGMSATL 278
Query: 110 GNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSF-----DGKSLTEIYADNLDYSL 164
N++ +++++ Y + RP E V + ++ S + + + ++ D
Sbjct: 279 PNLDLIASWLNAELYHTDFRPVPLLETVKIGNSIYDSSMKLVREFQPMLQVKGDE----- 333
Query: 165 TGSGPDAVLHL----VQGNLMVLIFCSSKIACSNLA---------LRLQFDRFPGTKEY- 210
D ++ L + N VL+FC SK C LA L Q + E+
Sbjct: 334 -----DHIVSLCYETICDNHSVLLFCPSKKWCEKLADTIAREFYNLHHQAEGLVKPPEFP 388
Query: 211 ----KKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTL 266
+ + +++++ LK G L + L++ + +GVA+HHA LT ER +IE A+ G +
Sbjct: 389 PVTLEPKGLQEVMDQLKHLPSG-LDSVLQKTVPWGVAFHHAGLTFEERDIIEGAFRQGLI 447
Query: 267 QIICCTSTLAAGVNLPAQRVIIRDS-YVGRDFISLNMYKQMVGRAGRTGLQESGESIMLC 325
+++ TSTL++GVNLPA+RVIIR + GR L YKQMVGRAGR G+ GESI++C
Sbjct: 448 RVLAATSTLSSGVNLPARRVIIRTPIFSGRPLDVLT-YKQMVGRAGRKGVDTVGESILVC 506
Query: 326 KTMQDFLRFSSMMNAGPEPISSHMD-------PPTLVDLILEVVAANLCSSLEDVKTLIK 378
K + + + ++++ +P+ S + ++ ILE++ + S+ +D++
Sbjct: 507 K-ISEKSKGTALLQGSLKPVCSCLRRHEGEEVTACMIRAILEIIVGGVASTPQDMQNYAS 565
Query: 379 HTLFYQLKSPEDQQTFLETTLSEIVASLLAS-----KGTMLTMNEAGHLS------LTSI 427
T F E QQ S + ++ A + + + E G + T +
Sbjct: 566 CT-FLAASMKEGQQEIERNQNSVQLGAIEACVMWLLENEFIQVAEVGDGTEGKVYHPTHL 624
Query: 428 AKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEYRIPSDGILLSRSKVY 487
A + + LS L I++DL F L N LH+++L+ P+ D + + +
Sbjct: 625 GSATLSSSLSPTDTLDIFADLQRAMKGFVLENDLHIVYLITPMF----EDWTTIDWYRFF 680
Query: 488 DRYTKFHPQTLRVAEALGVTENLVALNVTGKL------KDEKKALLCRFFHACILYDVLN 541
+ K RVAE +GV E +A V GK+ + + A+ RFF + +L D+++
Sbjct: 681 CLWEKLPISMKRVAELVGVEEGFLARCVKGKVVARTERQHRQMAIHKRFFTSLVLLDLIS 740
Query: 542 FDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELWCYKQ-LLTDLPQTLMYC 600
+++ + YG +Q+ + +A + F L W + LL+ + L +
Sbjct: 741 EVPLKEINQKYGCNRGQIQSLQQSAAVYAGMITVFSNRLG--WHNMELLLSQFQKRLTFG 798
Query: 601 RAPNLRALMDLPGVKIGRARQLLNAGYSSLELIARADAK--EMVAKIRHLPLRSARNLI 657
L L+ + + RAR L +G+ ++ +ARA+ EMV K +P +SAR +
Sbjct: 799 IQRELCDLVRVSLLNAQRARALYASGFLTVADLARANIADVEMVLK-NAVPFKSARKAV 856
>gi|405950373|gb|EKC18366.1| DNA polymerase theta [Crassostrea gigas]
Length = 2674
Score = 225 bits (573), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 207/752 (27%), Positives = 339/752 (45%), Gaps = 125/752 (16%)
Query: 13 AEEFKFYLEE--------YAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRID 64
A E FYL++ +G G Y P L++ + +CTIEKG+ LI L++ENR+D
Sbjct: 224 AREKMFYLQQLYQEVGVSVSGFMGSYSPPG-GLSQVDVAVCTIEKGNGLINRLMEENRLD 282
Query: 65 EIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKK----------------SIQIFAMSAT 108
++G++VIDE H++ + RG +LE +++K+ +L + IQI MSAT
Sbjct: 283 QLGIVVIDELHLVGDQHRGYLLELMLTKIRFLSQRMKKPDPQNMESSSTEGIQIIGMSAT 342
Query: 109 IGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSG 168
+ N++ L+ +++ Y + RP +E V + +F S L +I +L + G
Sbjct: 343 LPNLDLLARWLDATLYRTDYRPVPLTECVKLGADIFDS----RLQKIREVDLSVTFKGDT 398
Query: 169 PDAV---LHLVQGNLMVLIFCSSKIACSNLA---------------LRLQFDRFPGTKE- 209
V L ++ VLIFC +K C LA + +Q ++ G
Sbjct: 399 DHVVPLCLETLRDGHSVLIFCPTKNWCEKLAETIAREFYGILKKAPVDMQANQGSGGNPP 458
Query: 210 -----YKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHAD---------------- 248
+ ++++E L+ G L + L + + YGVAYHHA
Sbjct: 459 SPCLPLSRASLQEVVEQLRRTPVG-LDSTLGKTVPYGVAYHHAGKYQHKFIVRVKEDPGG 517
Query: 249 -------------------LTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIR 289
LT ER ++E A+ G ++++ TSTL++GVNLPA+RVIIR
Sbjct: 518 ARLYPEEDCPYVVAHHHTGLTFDERDILEGAFRQGAVKVLIATSTLSSGVNLPARRVIIR 577
Query: 290 DSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISS-- 347
I YKQM+GRAGR G+ GESI++CK + + + +A P P+SS
Sbjct: 578 TPLFHGKTIDFLTYKQMIGRAGRKGVDTQGESILICKPGERSKAVTLVQSALP-PVSSCL 636
Query: 348 -----HMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLF-YQLKSPEDQQ--------T 393
++ ILE+V + + S+ DV T+ L + DQ
Sbjct: 637 IKNQGEQLSSSMKRAILEIVVSGVADSVTDVTAYASCTMLAASLDTSSDQTQGMISACIQ 696
Query: 394 FLETTLSEIVASLLASKGTMLTMNEAGHLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKL 453
FL+ + + +S G T + A + + LS D L ++++L +
Sbjct: 697 FLQENEFVSLQRVQSSDGVY-----EDRFVPTQLGAAVLASSLSPDEGLSVFAELQKARQ 751
Query: 454 NFCLLNSLHMLFLVIPLEYRIPSDGILLSRSKVYDRYTKFHPQTLRVAEALGVTENLVAL 513
F L N LH+++LV P+ Y + G ++ K Y + K P RVA+ +GV+E +
Sbjct: 752 CFVLENELHIVYLVTPI-YSL-DLGAGMNWYKFYCLWDKLSPDKKRVAQLVGVSEAFLTR 809
Query: 514 NVTGKL--KDEKK----ALLCRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTS 567
+ G++ K E + A+ RF+ + IL D++ +V YG LQ+ +
Sbjct: 810 AIQGRIPTKTENQIRSLAIHKRFYTSLILSDLVQEVPLGEVCHRYGANKGQLQSLQQTAA 869
Query: 568 YFASKVYRFCEELPELWCYKQL-LTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAG 626
FA V FC L W +L L L + L L+ L + RAR L + G
Sbjct: 870 TFAGMVTVFCARLG--WYNLELILGQFQHRLTFGIQRELCDLVRLTLLNGQRARVLYDGG 927
Query: 627 YSSLELIARADAKEMVAKI--RHLPLRSARNL 656
+ ++ +A A + V KI + P +S++ L
Sbjct: 928 FHTVAALANASVSD-VEKIFKKSSPFQSSKKL 958
>gi|326481273|gb|EGE05283.1| DNA-directed DNA polymerase theta [Trichophyton equinum CBS 127.97]
Length = 920
Score = 225 bits (573), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 192/658 (29%), Positives = 303/658 (46%), Gaps = 55/658 (8%)
Query: 21 EEYAGVKGQYPPTKRQ--LNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLN 78
E + V G + +K + + + +CTIEK + L+ S I++ ID++G+IV+DE HML+
Sbjct: 230 ENFIRVTGFFGGSKARTTWSDTDVAVCTIEKANSLVNSAIEDCTIDKLGVIVLDELHMLD 289
Query: 79 EPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVT 138
+ RG ++E +V+K+L L++ IQI MSAT+ N L+ ++ Y+ RP E++
Sbjct: 290 DEHRGYLIEIMVTKLLLLQQDIQIIGMSATLSNTEVLAKWLNANYYISRYRPIPVEEFLV 349
Query: 139 VDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQ-----------GNLMV----- 182
+ ++ K L D S P + +++ N MV
Sbjct: 350 FEDYIYPVPTTKGLLRKMI-RPDTSSPNDVPASACRVIRKSEFRELAFPIPNAMVALACE 408
Query: 183 --------LIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKE-DLIEALKEENDGKLSTN 233
L+FC S+ AC A+ L D P T + EK DL+ +L+ G L T
Sbjct: 409 TAAAGYGALVFCGSRQACQTNAV-LIGDAMPDTLDEDIIEKRLDLVASLQSLPCG-LDTY 466
Query: 234 LEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYV 293
+ I GVA+HHA LT ER LI E + AG L+++ T +LAAG+NLPA+RVI+ + +
Sbjct: 467 FAKTIPRGVAFHHAGLTTEERVLIAEGFDAGILKVLVATCSLAAGINLPARRVILCGARM 526
Query: 294 GRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDP-- 351
GR+ + M +QM GRAGR G E GE+ LC T +D+ ++ A I+S + P
Sbjct: 527 GRELVGPAMLRQMRGRAGRKGKDEVGET-YLCCTSKDWEDVVGLLEAELPAIASGLAPGR 585
Query: 352 PTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQLKSPEDQQTFLE---TTLSEIVASLLA 408
+ +LE +A L S + + I+ +L + + E Q T E +TL E++ S L
Sbjct: 586 AGIKRALLEAIATKLVSGRDAINDYIRSSLLFH--NDEAQDTLFEMVQSTLQELLDSKLV 643
Query: 409 SKGTMLTMNEAGHLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVI 468
T T + A V + S D L IY +L F + +H+ ++
Sbjct: 644 KSSNDETFEP------TQLGLAIVASAFSPDDGLFIYGELKRALQAFVMDGEMHIFYMFS 697
Query: 469 PLEYRIPSDGILLSRSKVYDRYTKFHPQTLRVAEALGVTENLVALNVTGKLKDEKKALL- 527
PL+ D + R +V+ LR +GV LV G + ALL
Sbjct: 698 PLQASSEIDWMAF-RDEVH----GLDDSGLRTIRLVGVDPGLVNSIAMGHASIKDPALLR 752
Query: 528 --CRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELW- 584
R + A L D+ N +AK Y I +Q FA+ + +FC+ + W
Sbjct: 753 VYNRVYTAFQLRDLSNEIPVSSIAKKYNIARGAVQTLAQNCHGFAAGMAKFCQRMG--WD 810
Query: 585 CYKQLLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIARADAKEMV 642
+L + L +L + + VK AR L G+ +L +A A E+V
Sbjct: 811 MLAVVLEHMRDRLQAGARADLLEMAQVTYVKSRTARLLWENGFKTLRSLAEAAPSELV 868
>gi|391874324|gb|EIT83230.1| DNA polymerase theta/eta, DEAD-box superfamily [Aspergillus oryzae
3.042]
Length = 960
Score = 225 bits (573), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 186/679 (27%), Positives = 307/679 (45%), Gaps = 62/679 (9%)
Query: 3 HEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENR 62
H++++ L K+ F+ G + T I +CTIEK + LI + I+E
Sbjct: 252 HQRWKKLQKSIRVTGFF----GGSR-----TTATWADTDIAVCTIEKANSLINTAIEECN 302
Query: 63 IDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGI 122
I ++G++V+DE HML++ RG +LE +V+K+L L++ IQI MSAT+ N L+ ++
Sbjct: 303 IGDLGVVVLDELHMLDDEHRGYLLELMVTKILLLQQDIQIIGMSATLSNTELLAEWMNAN 362
Query: 123 TYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEI---YADNLDYSLTGS-------GPDAV 172
Y+ RP +Y+ + ++ + + L + A SLT + P A
Sbjct: 363 YYISTYRPIPIDDYLVYENAIYPAATSRQLFQTITRLASMSTVSLTDTMPPHRIIQPPAF 422
Query: 173 LHLVQ--GNLMV-------------LIFCSSKIACSNLALRLQFDRFPGTKEYKKQE--- 214
L N MV L+FC S+ AC L + + P +E
Sbjct: 423 RELANPTTNAMVALSVDTAAAGYGALVFCGSRQAC-QLHASIISEAMPVPAAVDPEELSR 481
Query: 215 KEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTST 274
+ DL+ L+ G L LE ++ GV +HHA +T ER I +AY G L+++ T +
Sbjct: 482 RLDLLAELRSLPSG-LDPVLENTLVRGVGFHHAGMTTEEREFIAQAYDQGVLRVLVATCS 540
Query: 275 LAAGVNLPAQRVIIRDSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRF 334
LAAGVNLPA+RVII + +GR+ + M +QM GRAGR G E+GE+ ++C +
Sbjct: 541 LAAGVNLPARRVIINGARMGRELVGPAMLRQMCGRAGRKGKDEAGETYLICGK-SELQAV 599
Query: 335 SSMMNAGPEPISSHMDPPT--LVDLILEVVAANLCSSLEDVKTLIKHTLFYQLKSPEDQQ 392
++ A I S + P L ILE +A L S LE +K +K TL Y+ +
Sbjct: 600 CDLLEADMPAIESCLAPEKRGLKRAILEAIATGLVSGLEAIKEYVKCTLLYRTMDKKIAY 659
Query: 393 TFLETTLSEIVASLLASKGTMLTMNEAGHLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNK 452
+++ L E+V+ +L N+ T + +A V + + + L +Y +L
Sbjct: 660 NIMKSALQELVSE------DLLHQNDDESYVATQLGQAVVASAFTPEDGLFVYEELNRAL 713
Query: 453 LNFCLLNSLHMLFLVIPLEYRIPSDGILLSRSKVYDRYTKFHPQTLRVAEALGVTENLVA 512
F + +H+ ++ PL+ + + D+ LR + +GV V
Sbjct: 714 QAFVMDGDMHVFYMFTPLQVAATTQ---VDWPIFRDQLDNLDESGLRALQFIGVQPGFVN 770
Query: 513 LNVT--GKLKDEKK------ALLCRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLN 564
V LK++ + R + A L D+ N VA Y +Q
Sbjct: 771 RMVQSGASLKEDTPEQIKLAVVYRRAYTALQLRDLSNEVPLSVVASRYRTPRGAVQTLAQ 830
Query: 565 VTSYFASKVYRFCEELPELW-CYKQLLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLL 623
FA+ + +FC+ + W +L + L +L + + VK AR L
Sbjct: 831 QCHGFAAGMVKFCQRMG--WGMLAAVLDHMRDRLEAGARADLLEMAQVTYVKGWTARLLR 888
Query: 624 NAGYSSLELIARADAKEMV 642
+ G+ +L +A ADAK++V
Sbjct: 889 DNGFRNLRALAEADAKDLV 907
>gi|317144178|ref|XP_001819956.2| DNA-directed DNA polymerase theta [Aspergillus oryzae RIB40]
Length = 935
Score = 225 bits (573), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 186/679 (27%), Positives = 307/679 (45%), Gaps = 62/679 (9%)
Query: 3 HEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENR 62
H++++ L K+ F+ G + T I +CTIEK + LI + I+E
Sbjct: 227 HQRWKKLQKSIRVTGFF----GGSR-----TTATWADTDIAVCTIEKANSLINTAIEECN 277
Query: 63 IDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGI 122
I ++G++V+DE HML++ RG +LE +V+K+L L++ IQI MSAT+ N L+ ++
Sbjct: 278 IGDLGVVVLDELHMLDDEHRGYLLELMVTKILLLQQDIQIIGMSATLSNTELLAEWMNAN 337
Query: 123 TYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEI---YADNLDYSLTGS-------GPDAV 172
Y+ RP +Y+ + ++ + + L + A SLT + P A
Sbjct: 338 YYISTYRPIPIDDYLVYENAIYPAATSRQLFQTITRLASMSTVSLTDTMPPHRIIQPPAF 397
Query: 173 LHLVQ--GNLMV-------------LIFCSSKIACSNLALRLQFDRFPGTKEYKKQE--- 214
L N MV L+FC S+ AC L + + P +E
Sbjct: 398 RELANPTTNAMVALSVDTAAAGYGALVFCGSRQAC-QLHASIISEAMPVPAAVDPEELSR 456
Query: 215 KEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTST 274
+ DL+ L+ G L LE ++ GV +HHA +T ER I +AY G L+++ T +
Sbjct: 457 RLDLLAELRSLPSG-LDPVLENTLVRGVGFHHAGMTTEEREFIAQAYDQGVLRVLVATCS 515
Query: 275 LAAGVNLPAQRVIIRDSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRF 334
LAAGVNLPA+RVII + +GR+ + M +QM GRAGR G E+GE+ ++C +
Sbjct: 516 LAAGVNLPARRVIINGARMGRELVGPAMLRQMCGRAGRKGKDEAGETYLICGK-SELQAV 574
Query: 335 SSMMNAGPEPISSHMDPPT--LVDLILEVVAANLCSSLEDVKTLIKHTLFYQLKSPEDQQ 392
++ A I S + P L ILE +A L S LE +K +K TL Y+ +
Sbjct: 575 CDLLEADMPAIESCLAPEKRGLKRAILEAIATGLVSGLEAIKEYVKCTLLYRTMDKKIAY 634
Query: 393 TFLETTLSEIVASLLASKGTMLTMNEAGHLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNK 452
+++ L E+V+ +L N+ T + +A V + + + L +Y +L
Sbjct: 635 NIMKSALQELVSE------DLLHQNDDESYVATQLGQAVVASAFTPEDGLFVYEELNRAL 688
Query: 453 LNFCLLNSLHMLFLVIPLEYRIPSDGILLSRSKVYDRYTKFHPQTLRVAEALGVTENLVA 512
F + +H+ ++ PL+ + + D+ LR + +GV V
Sbjct: 689 QAFVMDGDMHVFYMFTPLQVAATTQ---VDWPIFRDQLDNLDESGLRALQFIGVQPGFVN 745
Query: 513 LNVT--GKLKDEKK------ALLCRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLN 564
V LK++ + R + A L D+ N VA Y +Q
Sbjct: 746 RMVQSGASLKEDTPEQIKLAVVYRRAYTALQLRDLSNEVPLSVVASRYRTPRGAVQTLAQ 805
Query: 565 VTSYFASKVYRFCEELPELW-CYKQLLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLL 623
FA+ + +FC+ + W +L + L +L + + VK AR L
Sbjct: 806 QCHGFAAGMVKFCQRMG--WGMLAAVLDHMRDRLEAGARADLLEMAQVTYVKGWTARLLR 863
Query: 624 NAGYSSLELIARADAKEMV 642
+ G+ +L +A ADAK++V
Sbjct: 864 DNGFRNLRALAEADAKDLV 882
>gi|326476031|gb|EGE00041.1| DNA-directed DNA polymerase theta [Trichophyton tonsurans CBS
112818]
Length = 920
Score = 225 bits (573), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 192/658 (29%), Positives = 303/658 (46%), Gaps = 55/658 (8%)
Query: 21 EEYAGVKGQYPPTKRQ--LNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLN 78
E + V G + +K + + + +CTIEK + L+ S I++ ID++G+IV+DE HML+
Sbjct: 230 ENFIRVTGFFGGSKARTTWSDTDVAVCTIEKANSLVNSAIEDCTIDKLGVIVLDELHMLD 289
Query: 79 EPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVT 138
+ RG ++E +V+K+L L++ IQI MSAT+ N L+ ++ Y+ RP E++
Sbjct: 290 DEHRGYLMEIMVTKLLLLQQDIQIIGMSATLSNTEVLAKWLNANYYISRYRPIPVEEFLV 349
Query: 139 VDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQ-----------GNLMV----- 182
+ ++ K L D S P + +++ N MV
Sbjct: 350 FEDYIYPVPTTKGLLRKMI-RPDTSSPNDVPASACRVIRKSEFRELAFPIPNAMVALACE 408
Query: 183 --------LIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKE-DLIEALKEENDGKLSTN 233
L+FC S+ AC A+ L D P T + EK DL+ +L+ G L T
Sbjct: 409 TAAAGYGALVFCGSRQACQTNAV-LIGDAMPDTLDEDIIEKRLDLVASLQSLPCG-LDTY 466
Query: 234 LEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYV 293
+ I GVA+HHA LT ER LI E + AG L+++ T +LAAG+NLPA+RVI+ + +
Sbjct: 467 FAKTIPRGVAFHHAGLTTEERVLIAEGFDAGILKVLVATCSLAAGINLPARRVILCGARM 526
Query: 294 GRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDP-- 351
GR+ + M +QM GRAGR G E GE+ LC T +D+ ++ A I+S + P
Sbjct: 527 GRELVGPAMLRQMRGRAGRKGKDEVGET-YLCCTSKDWEDVVGLLEAELPAIASGLAPGR 585
Query: 352 PTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQLKSPEDQQTFLE---TTLSEIVASLLA 408
+ +LE +A L S + + I+ +L + + E Q T E +TL E++ S L
Sbjct: 586 AGIKRALLEAIATKLVSGRDAINDYIRSSLLFH--NDEAQDTLFEMVQSTLQELLDSKLV 643
Query: 409 SKGTMLTMNEAGHLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVI 468
T T + A V + S D L IY +L F + +H+ ++
Sbjct: 644 KSSNDETFEP------TQLGLAIVASAFSPDDGLFIYGELKRALQAFVMDGEMHIFYMFS 697
Query: 469 PLEYRIPSDGILLSRSKVYDRYTKFHPQTLRVAEALGVTENLVALNVTGKLKDEKKALL- 527
PL+ D + R +V+ LR +GV LV G + ALL
Sbjct: 698 PLQASSEIDWMAF-RDEVH----GLDDSGLRTIRLVGVDPGLVNSIAMGHASIKDPALLR 752
Query: 528 --CRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELW- 584
R + A L D+ N +AK Y I +Q FA+ + +FC+ + W
Sbjct: 753 VYNRVYTAFQLRDLSNEIPVSSIAKKYNIARGAVQTLAQNCHGFAAGMAKFCQRMG--WD 810
Query: 585 CYKQLLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIARADAKEMV 642
+L + L +L + + VK AR L G+ +L +A A E+V
Sbjct: 811 MLAVVLEHMRDRLQAGARADLLEMAQVTYVKSRTARLLWENGFKTLRSLAEAAPSELV 868
>gi|238486540|ref|XP_002374508.1| DNA-directed DNA polymerase theta, putative [Aspergillus flavus
NRRL3357]
gi|220699387|gb|EED55726.1| DNA-directed DNA polymerase theta, putative [Aspergillus flavus
NRRL3357]
Length = 935
Score = 225 bits (573), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 186/679 (27%), Positives = 307/679 (45%), Gaps = 62/679 (9%)
Query: 3 HEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENR 62
H++++ L K+ F+ G + T I +CTIEK + LI + I+E
Sbjct: 227 HQRWKKLQKSIRVTGFF----GGSR-----TTATWADTDIAVCTIEKANTLINTAIEECN 277
Query: 63 IDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGI 122
I ++G++V+DE HML++ RG +LE +V+K+L L++ IQI MSAT+ N L+ ++
Sbjct: 278 IGDLGVVVLDELHMLDDEHRGYLLELMVTKILLLQQDIQIIGMSATLSNTELLAEWMNAN 337
Query: 123 TYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEI---YADNLDYSLTGS-------GPDAV 172
Y+ RP +Y+ + ++ + + L + A SLT + P A
Sbjct: 338 YYISTYRPIPIDDYLVYENAIYPAATSRQLFQTITRLASMSTVSLTDTMPPHRIIQPPAF 397
Query: 173 LHLVQ--GNLMV-------------LIFCSSKIACSNLALRLQFDRFPGTKEYKKQE--- 214
L N MV L+FC S+ AC L + + P +E
Sbjct: 398 RELANPTTNAMVALSVDTAAAGYGALVFCGSRQAC-QLHASIISEAMPVPAAVNPEELSR 456
Query: 215 KEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTST 274
+ DL+ L+ G L LE ++ GV +HHA +T ER I +AY G L+++ T +
Sbjct: 457 RLDLLAELRSLPSG-LDPVLENTLVRGVGFHHAGMTTEEREFIAQAYDQGILRVLVATCS 515
Query: 275 LAAGVNLPAQRVIIRDSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRF 334
LAAGVNLPA+RVII + +GR+ + M +QM GRAGR G E+GE+ ++C +
Sbjct: 516 LAAGVNLPARRVIINGARMGRELVGPAMLRQMCGRAGRKGKDEAGETYLICGK-SELQAV 574
Query: 335 SSMMNAGPEPISSHMDPPT--LVDLILEVVAANLCSSLEDVKTLIKHTLFYQLKSPEDQQ 392
++ A I S + P L ILE +A L S LE +K +K TL Y+ +
Sbjct: 575 CDLLEADMPAIESCLAPEKRGLKRAILEAIATGLVSGLEAIKEYVKCTLLYRTMDKKIAY 634
Query: 393 TFLETTLSEIVASLLASKGTMLTMNEAGHLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNK 452
+++ L E+V+ +L N+ T + +A V + + + L +Y +L
Sbjct: 635 NIMKSALQELVSE------DLLHQNDDESYVATQLGQAVVASAFTPEDGLFVYEELNRAL 688
Query: 453 LNFCLLNSLHMLFLVIPLEYRIPSDGILLSRSKVYDRYTKFHPQTLRVAEALGVTENLVA 512
F + +H+ ++ PL+ + + D+ LR + +GV V
Sbjct: 689 QAFVMDGDMHVFYMFTPLQVAATTQ---VDWPIFRDQLDNLDESGLRALQFIGVQPGFVN 745
Query: 513 LNVT--GKLKDEKK------ALLCRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLN 564
V LK++ + R + A L D+ N VA Y +Q
Sbjct: 746 RMVQSGASLKEDTPEQIKLAVVYRRTYTALQLRDLSNEVPLSVVASRYRTPRGAVQTLAQ 805
Query: 565 VTSYFASKVYRFCEELPELW-CYKQLLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLL 623
FA+ + +FC+ + W +L + L +L + + VK AR L
Sbjct: 806 QCHGFAAGMVKFCQRMG--WGMLAAVLDHMRDRLEAGARADLLEMAQVTYVKGWTARLLR 863
Query: 624 NAGYSSLELIARADAKEMV 642
+ G+ +L +A ADAK++V
Sbjct: 864 DNGFRNLRALAEADAKDLV 882
>gi|351703749|gb|EHB06668.1| DNA polymerase theta, partial [Heterocephalus glaber]
Length = 2573
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 188/715 (26%), Positives = 347/715 (48%), Gaps = 89/715 (12%)
Query: 13 AEEFKFYLE---EYAGVK-----GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRID 64
A+E K+YL+ + G+K G P+ + I +CTIE+ + LI LI+EN++
Sbjct: 152 AKEKKYYLQSLFQEVGIKVDGYMGSASPSG-HFSSLDIAVCTIERANGLINRLIEENKMH 210
Query: 65 EIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKK---------------SIQIFAMSATI 109
+G++V+DE HML + RG +LE +++K+ +L + ++Q+ MSAT+
Sbjct: 211 LLGMVVVDELHMLGDSHRGYLLELLLTKICFLTQKSASRQADLASPLSNAVQVVGMSATL 270
Query: 110 GNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSF-----DGKSLTEIYADNLDYSL 164
N+ +++++ Y + RP E V + ++ S + + + ++ D+
Sbjct: 271 PNLELIASWLNAELYHTDFRPVPLLELVKIGNSIYDSSMKLIREFQPMLQVKGDD----- 325
Query: 165 TGSGPDAVLHL----VQGNLMVLIFCSSKIACSNLA---------LRLQFDRFPGTKEY- 210
D V+ L V+ N VL+FC SK C LA L Q + E+
Sbjct: 326 -----DHVVSLCYETVRDNHSVLLFCPSKKWCEKLADIIAREFYNLHHQAEGLAKASEFI 380
Query: 211 ----KKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTL 266
+++ ++++ LK G L + L++ + +GVA+HHA LT ER +IE A+ G +
Sbjct: 381 PPILEQKSLLEVVDQLKRSPSG-LDSVLQKTVPWGVAFHHAGLTFEERDIIEGAFRQGLI 439
Query: 267 QIICCTSTLAAGVNLPAQRVIIRDSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCK 326
+++ TSTL++GVNLPA+RVIIR + + YKQMVGRAGR G+ GESI+LCK
Sbjct: 440 RVLAATSTLSSGVNLPARRVIIRTPIFSGRPLDILTYKQMVGRAGRKGVDTMGESILLCK 499
Query: 327 TMQDFLRFSSMMNAGPEPISSHMD------PPTLVDLILEVVAANLCSSLEDVK-----T 375
+ + +++ +P+ S + +++ ILE++ + + S+ +D++ T
Sbjct: 500 NSEKS-KGIALLQGSLKPVRSCLQRQDGEVTASMIRAILEIIVSGMASTSQDMQIYASCT 558
Query: 376 LIKHTLFYQLKSPEDQQTFLE-TTLSEIVASLLASKGTMLT----MNEAGHLSLTSIAKA 430
+ ++ + + + Q ++ + V LL ++ +T E T + A
Sbjct: 559 FLAASMKERKQGIQKNQDSVQLGAIEACVMWLLENEFIQITEPSDATEGNAYHPTHLGTA 618
Query: 431 AVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEYRIPSDGILLSRSKVYDRY 490
+ + LS L I++DL F L N LH+++LV P+ D + + +
Sbjct: 619 TLFSSLSPTNTLDIFADLQRAMKGFVLENDLHIVYLVTPMF----EDWTTTDWYRFFCLW 674
Query: 491 TKFHPQTLRVAEALGVTENLVALNVTGKL------KDEKKALLCRFFHACILYDVLNFDN 544
K RVAE +G+ E +A V GK+ + + A+ RFF + +L D+++
Sbjct: 675 EKLPTSMKRVAELVGIEEGFLARCVKGKVVARTERQHRQMAIHKRFFTSLVLLDLISEIP 734
Query: 545 HQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELWCYKQ-LLTDLPQTLMYCRAP 603
+++ + YG +Q+ + +A + F L W + LL+ + L +
Sbjct: 735 LKEIIQKYGCNRGQVQSLQQSAAIYAGMITVFSSRLG--WHNMELLLSQFQKRLTFGIQR 792
Query: 604 NLRALMDLPGVKIGRARQLLNAGYSSLELIARADAKEMVAKI-RHLPLRSARNLI 657
L L+ + + RAR L +G+ ++ +ARA+ E+ + + +P +SAR +
Sbjct: 793 ELCDLVRVSLLNAQRARFLYASGFLTVADLARANVAEVEMFLQKAVPFKSARKAV 847
>gi|358391463|gb|EHK40867.1| hypothetical protein TRIATDRAFT_204552 [Trichoderma atroviride IMI
206040]
Length = 964
Score = 223 bits (568), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 189/636 (29%), Positives = 305/636 (47%), Gaps = 51/636 (8%)
Query: 42 IYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQ 101
I ICT+EK + LI + I+++ I ++ +V+DE HM+++ RG +LE + +K+L L++ IQ
Sbjct: 260 IAICTLEKANMLINTAIEDSSISQLRAVVLDELHMIDDDHRGYLLELIATKLLSLEQPIQ 319
Query: 102 IFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQ-SFDGKS------LTE 154
I MSAT+ N N ++ +++ +Y RP E++ D +V+ +G S + E
Sbjct: 320 IIGMSATLPNANLVAEWLKAHSYETRYRPIPIEEHLVCDGKVYYVGSNGASAQRHLKVDE 379
Query: 155 IYADNLDYSLTGSGP----------DAVLHLVQGNLMV----LIFCSSKIACSNLALRLQ 200
I ++ + G +AV+ L ++ LIF S+ C A RL
Sbjct: 380 ISNGQVEPTRWIQGSSHREFQDPVMNAVVSLAHETAVLGYGSLIFAGSRSICEADA-RLI 438
Query: 201 FDRFPGTKEYKK---QEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLI 257
P E ++ DL+ L+ + G LEE +LYGVA+HHA LT+ ER LI
Sbjct: 439 SKVMPQLDELDSATMDKRMDLLSELRSLSTGA-DPVLEETVLYGVAFHHAGLTSEERDLI 497
Query: 258 EEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGRDFISLNMYKQMVGRAGRTGLQE 317
AY GTL + T +LAAG+NLPA+RVI+ ++ +GRDF+ +M +QM GRAGR G
Sbjct: 498 AAAYDDGTLPVCVATCSLAAGINLPARRVILHNARMGRDFVGPSMLRQMRGRAGRQGKSP 557
Query: 318 SGESIMLCKTMQDFLRFSSMMNAG-PEPISS-HMDPPTLVDLILEVVAANLCSSLEDVKT 375
GE+ + C+ D + +M A PE +S + + + ILEV++ L +S E +
Sbjct: 558 VGETYLCCR-QNDLEQVLDLMYADIPEIVSCLNTENKRVQRAILEVISVRLATSQESLTE 616
Query: 376 LIKHTLFYQLKSPEDQQTFLETTLSEIVASLLASKGTMLTMNEA-GHLSLTSIAKAAVQA 434
++L E + L++ L EI L +N++ + + T + KA V +
Sbjct: 617 YFSNSLISYTHDREFIEECLKSGLQEI-------HDLGLIVNDSYSNFTATQLGKAIVAS 669
Query: 435 GLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEYRIPSDGILLSRSKVYDRYTKFH 494
+ + I+++L F + +H+L++ P++ GI L+ +
Sbjct: 670 SVDPYDGVFIHAELTKTLKAFVMDGEMHILYVFTPVQ----DFGITLNWQIFRNEMDALD 725
Query: 495 PQTLRVAEALGVTENLVALNVTG-KLKD---EKKALL---CRFFHACILYDVLNFDNHQK 547
LRV LG+ V G L++ E+K L RF+ A L D+ N
Sbjct: 726 ESGLRVLGFLGIKPTAVQKFAQGAPLRENTPEEKELARVYRRFYLALQLRDLCNEMPIHM 785
Query: 548 VAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELW-CYKQLLTDLPQTLMYCRAPNLR 606
VA+ Y +Q FA+ + +FCE + W L LM +L
Sbjct: 786 VARKYDSPRGSVQTLAQTCQGFAAGIIKFCEHMG--WGIMAAALEHFSDRLMAGARTDLL 843
Query: 607 ALMDLPGVKIGRARQLLNAGYSSLELIARADAKEMV 642
AL +P +K AR GY ++ IA AD KE+V
Sbjct: 844 ALAKIPFIKSRTARVFWENGYRTIGAIANADPKELV 879
>gi|332225568|ref|XP_003261953.1| PREDICTED: DNA polymerase theta, partial [Nomascus leucogenys]
Length = 2473
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 197/717 (27%), Positives = 340/717 (47%), Gaps = 100/717 (13%)
Query: 13 AEEFKFYLE---EYAGVK-----GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRID 64
A+E K+YL+ + G++ G P+ R + I +CTIE+ + LI LI+EN++D
Sbjct: 35 AKEKKYYLQSLFQEVGIRVDGYMGSTSPS-RHFSSLDIAVCTIERANGLINRLIEENKMD 93
Query: 65 EIGLIVIDEFHMLNEPQRGPILECVVSKVLY-------------LKKSIQIFAMSATIGN 111
+G++V+DE HML + RG +LE +++K L ++QI MSAT+ N
Sbjct: 94 LLGMVVVDELHMLGDSHRGYLLELLLTKXXXXXXXXXQADLASSLSNAVQIVGMSATLPN 153
Query: 112 INALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSF-----DGKSLTEIYADNLDYSLTG 166
+ +++++ Y N RP E V V ++ S + + + ++ D
Sbjct: 154 LEIVASWLNAELYHTNFRPVPLLESVKVGNSIYDSSMKLVREFEPMLQVKGDE------- 206
Query: 167 SGPDAVLHL----VQGNLMVLIFCSSKIACSNLA---------LRLQFDRFPGTKE---- 209
D V+ L ++ N VL+FC SK C LA L Q + E
Sbjct: 207 ---DHVVSLCYETIRDNHSVLLFCPSKKWCEKLADTIAREFYNLHHQAEGLVKPSECPPV 263
Query: 210 -YKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQI 268
+++E ++++ L+ G L + L++ + +GVA+HHA LT ER +IE A+ G +++
Sbjct: 264 ILEQKELLEVMDQLRRLPSG-LDSVLQKTVPWGVAFHHAGLTFEERDIIEGAFRQGLIRV 322
Query: 269 ICCTSTLAAGVNLPAQRVIIRDSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTM 328
+ TSTL++GVNLPA+RVIIR G + + YKQMVGRAGR G+ GESI++CK
Sbjct: 323 LAATSTLSSGVNLPARRVIIRTPIFGGRPLDILTYKQMVGRAGRKGVDTVGESILICKNS 382
Query: 329 QDFLRFSSMMNAGPEPISSHMD-------PPTLVDLILEVVAANLCSSLEDVKTLIKHTL 381
+ + +++ +P+ S + +++ ILE++ + + S+ +D+ T T
Sbjct: 383 EKS-KGIALLQGSLKPVRSCLQRREGEEVTASMIRAILEIIVSGVASTSQDMHTYAACT- 440
Query: 382 FYQLKSPEDQQTFLETTLS----------------EIVASLLASKGTMLTMNEAGHLSLT 425
F E +Q S E + S AS G + HL
Sbjct: 441 FLAASMKEGKQGIQRNQESVQLGAIEACVMWLLENEFIQSTEASDGPEGKVYHPTHL--- 497
Query: 426 SIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEYRIPSDGILLSRSK 485
A + + LS L I++DL F L N LH+L+LV P+ D + +
Sbjct: 498 --GSATLSSSLSPADTLDIFADLQRAMKGFVLENDLHILYLVTPMF----EDWTTIDWYR 551
Query: 486 VYDRYTKFHPQTLRVAEALGVTENLVALNVTGKL------KDEKKALLCRFFHACILYDV 539
+ + K RVAE +GV E +A V GK+ + + A+ RFF + +L D+
Sbjct: 552 FFCLWEKLPTSMKRVAELVGVEEGFLARCVKGKVVARTERQHRQMAIHKRFFTSLVLLDL 611
Query: 540 LNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELWCYKQ-LLTDLPQTLM 598
++ +++ + YG +Q+ + +A + F L W + LL+ + L
Sbjct: 612 ISEVPLREINQKYGCNRGQIQSLQQSAAVYAGMITVFSNRLG--WHNMELLLSQFQKRLT 669
Query: 599 YCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIARADAKEMVAKIRH-LPLRSAR 654
+ L L+ + + RAR L +G+ ++ +ARA+ E+ +++ +P +S R
Sbjct: 670 FGIQRELCDLVRVSLLNAQRARVLYASGFHTVADLARANIVEVEVILKNAVPFKSVR 726
>gi|91091764|ref|XP_969311.1| PREDICTED: similar to DNA polymerase theta [Tribolium castaneum]
gi|270001085|gb|EEZ97532.1| hypothetical protein TcasGA2_TC011380 [Tribolium castaneum]
Length = 1588
Score = 223 bits (567), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 191/652 (29%), Positives = 304/652 (46%), Gaps = 50/652 (7%)
Query: 25 GVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGP 84
G G Y P +CTIEK + LI +Q+ + EIG +VIDE H+L E RG
Sbjct: 286 GFMGSYNPPG-GFKSVQFAVCTIEKANSLINGFLQDGSLGEIGTVVIDEMHLLGETHRGY 344
Query: 85 ILECVVSKVLYL----KKSIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVD 140
ILE +++K+ Y+ + IQI MSAT+ N+ L+ +++ YV N RP E+V +
Sbjct: 345 ILELLLTKLKYMTLKHQIEIQIIGMSATLPNLKTLADWLDAELYVTNYRPIPLHEHVLLG 404
Query: 141 KRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRLQ 200
++ D + D Y T L + N VLIFC +K C NLAL++
Sbjct: 405 DSLY---DSRFRLVRTLDPAPYPDTDHILQLCLETITANCSVLIFCPTKNWCENLALQIA 461
Query: 201 FDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNL-----------EECILYGVAYHHADL 249
+ K + Q L L E G+L L +C+ +GV +HHA L
Sbjct: 462 QAFY---KLGRGQADHALRHQLNAEAIGELLNQLALSPIGLDDVLRKCVSFGVGFHHAGL 518
Query: 250 TAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS-YVGRDFISLNMYKQMVG 308
T ER +IE + G ++++ TSTL++GVNLPA+RVIIR + GR L+ Y+QMVG
Sbjct: 519 TLDERDIIEGGFRGGVIRVLVATSTLSSGVNLPARRVIIRTPIFHGRAIDGLS-YRQMVG 577
Query: 309 RAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPP-TLVDLILEVVAANLC 367
RAGR G +GESI++C+ + + ++ EPI S ++ L ILE++A+ +
Sbjct: 578 RAGRMGKDTAGESILVCQKKDEKI-VRKILEDELEPIVSCLEQDGRLRRAILEIIASGVA 636
Query: 368 SSLEDVKTLIKHTLFYQLKSPEDQQTFLETTLSEIVASLLASKGTMLTMNEAGHLSLTSI 427
++ +DV+ K TL Q T++ E + LL ++ L ++ + + +
Sbjct: 637 TTYDDVRLFAKCTLLGQ------------TSVEEALDFLLCNEFLRLGDDK---YTPSGL 681
Query: 428 AKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEYRIPSDGILLSRSKVY 487
KA + + L + L + +L + F L L +++LV P Y L
Sbjct: 682 GKACLTSSLPPEDGLALLGELDKARQCFVLNTELQLVYLVTP--YSACHQWGNLDWMNYL 739
Query: 488 DRYTKFHPQTLRVAEALGVTENLVALNVTGKLKD---EKKALLCRFFHACILYDVLNFDN 544
+ K +V E +GV E+ + G+L +K+ + RF+ A L D++N
Sbjct: 740 QVWEKLPTTMQKVGELVGVRESYIVAATRGQLPSNNYQKQQVHKRFYIALALQDLVNERP 799
Query: 545 HQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELWCYKQLLTDLPQTLMYCRAPN 604
V +G LQ + FA V F ++L W ++L Q ++
Sbjct: 800 LASVCAKFGCNRGLLQTLQLTAATFAGMVTAFAKQLG--WANVEILISQFQDRLHFGVSR 857
Query: 605 LRALMDLPGVKIGR-ARQLLNAGYSSLELIARADAKEM-VAKIRHLPLRSAR 654
+ + GR AR L NAG +L IA +D + A ++ +P S +
Sbjct: 858 DLLDLMRLPLLNGRSARALYNAGLETLIQIANSDVATIESAFLKVVPFESGK 909
>gi|342890206|gb|EGU89068.1| hypothetical protein FOXB_00417 [Fusarium oxysporum Fo5176]
Length = 1368
Score = 222 bits (566), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 176/638 (27%), Positives = 299/638 (46%), Gaps = 52/638 (8%)
Query: 42 IYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQ 101
I +CT+EK + L+ + I + I ++ +V+DE HM+++ RG +LE V +K+L L++ +Q
Sbjct: 245 IGVCTLEKANALVNTAIDDCSISKLRAVVLDELHMVDDDHRGYLLELVATKLLSLEQRVQ 304
Query: 102 IFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSFDGKSL--------- 152
I MSAT+ N++ ++ +++G Y RP E++ D ++ + SL
Sbjct: 305 IVGMSATLPNMDMMARWLDGHCYETRYRPVPIEEHLVYDGNIYPAGSTSSLIKTATQLNS 364
Query: 153 --TEIYAD-----NLDYSLTGSGPDAVLHLVQ--------GNLMVLIFCSSKIACSNLAL 197
T+ A ++ S D VL+ V L+F S+ C + A
Sbjct: 365 RSTQTQAQMRPIRRIEPSTHKELRDPVLNAVVTLAHETAFAGFGALVFAGSRGMCESDA- 423
Query: 198 RLQFDRFPGTKEYKK---QEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGER 254
R P E K + DL+ L+ N G + LEE +LYGVA+HHA LT ER
Sbjct: 424 RWISRAMPQPHELKADVVNRRMDLLGELRSLNTG-VDPVLEETVLYGVAFHHAGLTTEER 482
Query: 255 RLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGRDFISLNMYKQMVGRAGRTG 314
LI AY +GTL + T +LAAG+NLPA+RVI+ + +GR+F+ +M +QM GRAGR G
Sbjct: 483 DLIAAAYDSGTLLVCVATCSLAAGINLPARRVILHNCRMGREFVGPSMLRQMRGRAGRQG 542
Query: 315 LQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPT--LVDLILEVVAANLCSSLED 372
GE+ LC D + +MNA P++S ++ + +LEV++ L +S E
Sbjct: 543 KASIGET-YLCSRENDLEQVVELMNAELPPVASCLNTENRRIQRALLEVISIRLATSRES 601
Query: 373 VKTLIKHTLFYQLKSPEDQQTFLETTLSEIVASLLASKGTMLTMNEAGHLSLTSIAKAAV 432
+ +L S + + ++L EI S G +T + + T + +A V
Sbjct: 602 IMDYFSKSLLIHTHSAKFVNDCITSSLEEI-----ESMG-FVTSDSLSMFTATQLGRAIV 655
Query: 433 QAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEYRIPSDGILLSRSKVYDRYTK 492
+ + D + ++++L F + +H+L+ P++ G++++ +
Sbjct: 656 ASAIDPDDGVFVHNELGRALQAFVMDGEMHVLYTFTPVQ----EFGVMVNWQVFRNEMEG 711
Query: 493 FHPQTLRVAEALGVTENLV-------ALNVTGKLKDEKKALLCRFFHACILYDVLNFDNH 545
LRV LG+ + L+ T + + + RF+ A L D+ N
Sbjct: 712 LDESGLRVLRLLGIKPTTILKLAQGATLHETTPEEKQVARVHRRFYLALQLRDLCNEIPI 771
Query: 546 QKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELW-CYKQLLTDLPQTLMYCRAPN 604
VA+ Y + +QN FA+ + +FCE++ W L L+ +
Sbjct: 772 HIVARKYDVPRGMVQNLSQTCQGFAAGMIKFCEQMS--WGVMAAALEHFSDRLVAGARAD 829
Query: 605 LRALMDLPGVKIGRARQLLNAGYSSLELIARADAKEMV 642
L AL +P +K AR G+ ++ IA AD E++
Sbjct: 830 LLALAKIPFIKSRTARVFWENGFRTVATIANADPTELL 867
>gi|310790869|gb|EFQ26402.1| DEAD/DEAH box helicase [Glomerella graminicola M1.001]
Length = 909
Score = 222 bits (566), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 190/681 (27%), Positives = 315/681 (46%), Gaps = 65/681 (9%)
Query: 3 HEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENR 62
HEK +A E+ + + G K + PT + + +CTIEK + LI + I +
Sbjct: 201 HEKRIWRRRADEDSIRVIGFFGGSKIK--PTWSDFD---VGVCTIEKANALINTAIDDCS 255
Query: 63 IDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGI 122
I+ + +V+DE HM+++ RG ++E + +K+L L + +QI MSAT+ NIN L+ ++
Sbjct: 256 INHLKAVVLDELHMIDDDHRGYLMELIGTKLLTLPQPVQIIGMSATMSNINLLANWLGAH 315
Query: 123 TYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGP------------- 169
+Y RP E++ + V+ + +++E+ ++ TG+ P
Sbjct: 316 SYETRYRPVPIEEHLVYEGNVYPA---ATMSELL-KTANHLKTGTQPELLTSKAIRRVEP 371
Query: 170 -------DAVLHLV--------QGNLMVLIFCSSKIACSNLALRLQFDRFPGTKEYKK-- 212
D VL+ V + L+F SS+ C + A R P E
Sbjct: 372 SGHKEFQDPVLNAVVSLASETARAGYGALVFASSRYGCESDA-RWIARVMPMQNELDPAL 430
Query: 213 -QEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICC 271
+++ DL+ L+ G L LEE + GVA+HHA LT ER LI AY G +++
Sbjct: 431 VEKRIDLLAELRSLGTG-LDPVLEETVPMGVAFHHAGLTIEERDLIASAYDTGVIKVCIA 489
Query: 272 TSTLAAGVNLPAQRVIIRDSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDF 331
T +LAAG+NLPA+RVI+ ++ +GRDF+ +M +QM GRAGR G E GE+ + C+ D
Sbjct: 490 TCSLAAGINLPARRVILHNARMGRDFVGPSMLRQMRGRAGRKGKDEVGETYLCCRK-DDL 548
Query: 332 LRFSSMMNAGPEPISSHM--DPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQLKSPE 389
+ +M+A I+S + D + +LEV+A L +S + + I+ TL S E
Sbjct: 549 EKVVDLMHAEMPHITSGLTTDKQRIQRALLEVIAVRLATSRDSLDEYIRKTLLSHSSSLE 608
Query: 390 DQQTFLETTLSEIVASLLASKGTMLTMNEAGHLSLTSIAKAAVQAGLSHDVCLIIYSDLL 449
Q +E +L + K + + G+ T++ KA V A L D + I+ +L
Sbjct: 609 ALQECVEASLQNL------QKMDFVVTDVCGNYQPTTLGKAVVAAALDPDDGVFIHKELE 662
Query: 450 HNKLNFCLLNSLHMLFLVIPLEYRIPSDGILLSRSKVYDRYTKFHPQTLRVAEALGVTEN 509
F + +H+L+ P++ + + R+++ + H RV LG+
Sbjct: 663 RALQAFVMDGEMHILYTFTPVQNFGTNVNWQVFRNEMENLDDSGH----RVLGFLGLKCA 718
Query: 510 LV-------ALNVTGKLKDEKKALLCRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNF 562
++ L T + E + RF+ A L D+ N Q VA+ Y + +Q
Sbjct: 719 MINKLAQGSTLKETTAEEKETVRVYRRFYMAFQLRDLCNEMPIQAVARKYDVPRGAVQTL 778
Query: 563 LNVTSYFASKVYRFCEELPELW-CYKQLLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQ 621
FA+ + +FCE + W L L +L AL + VK AR
Sbjct: 779 SQTCHGFAAGMIKFCEHMG--WGIMAAALDHFSDRLRAGAKSDLLALAQITFVKSRTARV 836
Query: 622 LLNAGYSSLELIARADAKEMV 642
G+ S+ IA AD E++
Sbjct: 837 FWENGFRSVAAIANADPSELL 857
>gi|290998603|ref|XP_002681870.1| predicted protein [Naegleria gruberi]
gi|284095495|gb|EFC49126.1| predicted protein [Naegleria gruberi]
Length = 1648
Score = 222 bits (565), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 182/655 (27%), Positives = 316/655 (48%), Gaps = 75/655 (11%)
Query: 38 NKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLK 97
+ + + +CT E+G+ ++ LI+ +IDEIG I+IDE H + EP RG ILE +++K++YLK
Sbjct: 285 DDERVMVCTFERGNSILNGLIRTGKIDEIGTIIIDELHSITEPDRGYILELILTKIIYLK 344
Query: 98 KSIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSFDG--KSLTEI 155
IQI AMSAT+ N++ L++F+ +V + RP SEY+ D +VF + ++LT
Sbjct: 345 PKIQIIAMSATLPNVDKLASFLNAYLFVTDYRPVPLSEYMVHDSKVFDTNCNLVRNLTP- 403
Query: 156 YADNLDYSLTGSGPD----AVLHLVQGNLMVLIFCSSKIACSNLALRLQFDRFPG-TKEY 210
Y+++ PD ++L L+ +IFCSSK+ C A + + P E+
Sbjct: 404 ------YTVSKKLPDGFNISILSLIDTEFATIIFCSSKLKCKLFAKFIAEENQPQHIPEH 457
Query: 211 KKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIIC 270
Q++++L+ LK G L +L + GV +HH+ LT E++L+E A+ G ++I+
Sbjct: 458 LVQQRQELLTNLKLSTTG-LDPDLNFSMGRGVGFHHSSLTMEEKKLVELAFRNGMIKILL 516
Query: 271 CTSTLAAGVNLPAQRVIIRDSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQD 330
CT+TLA GVNLPA+RVII +GRD +S+ YKQ GRAGR G+ GES ++ +++
Sbjct: 517 CTTTLATGVNLPARRVIISSLTMGRDDLSIVNYKQAAGRAGRAGIDVKGESYLIVPSLE- 575
Query: 331 FLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQLKSPED 390
S ++++ P+ S ++ + +LE ++ + + D+ + +K T
Sbjct: 576 --SGSKLLSSKFTPMKSCLNEKHISRALLENISTGIIRTAHDIVSYLKCTFL-------- 625
Query: 391 QQTFLETTLSEIVAS---LLASKGTMLTMNEAGHLSLTSIAKAAVQAGLSHDVCLIIYSD 447
+ E L I + L G + +N + A A + + L Y
Sbjct: 626 SKCIPEKELRSIGINSKVFLEKNGFIRWINGKDSFDCKPLGFATQIANICPYLSLKFYQT 685
Query: 448 LLHNKLNFCLLNSLHMLFLVIPLEYRIPSDGILLSRSKVYDRYTKFHPQTLRVAEA---L 504
+ + NF L + L M++ IL S S+ +T ++ +VAE +
Sbjct: 686 IKNELKNFYLEDDLGMIY-------------ILASFSENSLFHTDYNDTFSKVAEKIVNI 732
Query: 505 GVTENLVALNVTGKLKD-------------------EKKALLCRFFHACILYDVLNFDNH 545
+ + V K++D E + ILYD++
Sbjct: 733 AIKRREFSEFVNNKIRDINELRGYILSVGNRSSHQRELSETIYTLRKTFILYDIILEYPI 792
Query: 546 QKVAKMY-GIQNSH--LQNFLNVTSYFASKVYRFCE--ELPELWCYKQLLTDLPQTLMYC 600
+ +A+ Y G ++ +QN + AS + FC+ LP + + ++ + L+
Sbjct: 793 KNIAETYFGDSDARGSVQNVQKDAASKASVLSSFCKYAALPSF--FSEAFKEIKERLVSG 850
Query: 601 RAPNLRALMDLPGVKIGRARQLLNAGYSSLELIARADAKEMVAKIRHLPLRSARN 655
L L+ +P V RAR L +AG L IA+ A E I ++ ++ ++N
Sbjct: 851 VRQELVPLVQIPFVGSSRARLLFSAG---LRTIAQV-ADETPESIENILVKGSQN 901
>gi|432846329|ref|XP_004065883.1| PREDICTED: LOW QUALITY PROTEIN: DNA polymerase theta-like [Oryzias
latipes]
Length = 2391
Score = 222 bits (565), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 195/713 (27%), Positives = 342/713 (47%), Gaps = 71/713 (9%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+ EK Q L +E +E Y G + +CTIEK + L+ LI+E
Sbjct: 136 VAKEKMQYLQSVFQEAGVRVEGYMGSTS----AAGGFTTLDVAVCTIEKANSLVNRLIEE 191
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLY----------LKKSIQIFAMSATIG 110
+ + +G++V+DE HM+ + RG +LE +++K+LY L + +QI MSAT+
Sbjct: 192 DNMALLGMVVVDELHMVGDSGRGYLLELLLTKILYISQKQKTSGSLSEGVQIIGMSATLP 251
Query: 111 NINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPD 170
N+ L+ ++ Y + RP E++ V ++ +SL+ + + G D
Sbjct: 252 NLALLAGWLGAELYQTDYRPVPLEEHLKVGCSIYD----RSLSVVRQFTPVLHVKGDD-D 306
Query: 171 AVLHL----VQGNLMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEK----------E 216
++ L V+ VL+FC SK C LA + + + K E
Sbjct: 307 HIVSLCYETVRQGHSVLLFCPSKNWCEKLADTIAREFYNIRLSDGKAEPLPVCLDHDGLM 366
Query: 217 DLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLA 276
D++ L+ G L L+ + +GVA+HHA LT ER ++E A+ G ++++ TSTL+
Sbjct: 367 DVLAQLRRTPAG-LDPILQRTVRWGVAFHHAGLTFDERDVLEGAFRQGLVRVLSATSTLS 425
Query: 277 AGVNLPAQRVIIRDSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSS 336
+GVNLPA+RVIIR + YKQM GRAGR G+ GES+++CK ++ + +S
Sbjct: 426 SGVNLPARRVIIRTPTFNGHLLDPLTYKQMAGRAGRKGVDTRGESLLVCKKAEE-KKGAS 484
Query: 337 MMNAGPEPISSHM-------DPPTLVDLILEVVAANLCSSLEDVK-----TLIKHTLFYQ 384
++ +PISS + +++ ILE++ + + +DV+ +L+ ++
Sbjct: 485 LLRGSLQPISSCLVRREGEGVATSMLRAILEIIVGGVACTPQDVQRYASCSLLAASVRCD 544
Query: 385 LKSPEDQQTFLETTLSEIVASLLASKGTMLTMNEAGHLS-----LTSIAKAAVQAGLSHD 439
K P +++ + V L+ ++ + +E G++ T + A + + LS
Sbjct: 545 SKKPSGKESN-RGAIEACVEWLMENEFINIQKDEQGNVKPERYCPTQLGAATLASSLSPP 603
Query: 440 VCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEYRIPSDGILLSRSKVYDRYTKFHPQTLR 499
L I++DL F L N LH+++L+ PL ++ + + + + + R
Sbjct: 604 EALGIFADLQRAMKGFVLENDLHIMYLITPLY----AEWTTIDWYQFFCLWEQLSSSMKR 659
Query: 500 VAEALGVTENLVALNVTGKL--KDEKK----ALLCRFFHACILYDVLNFDNHQKVAKMYG 553
VAE +GV E+ +A +V+GKL K EK+ A+ RFF +L D++N VA Y
Sbjct: 660 VAELVGVQESFLARSVSGKLVAKTEKQSRQMAIHKRFFTTLVLQDLVNEVPLGTVASKYN 719
Query: 554 IQNSHLQNFLNVTSYFASKVYRFCEELPELWCYKQLLTDLPQTLMYCRAPNLRALMDLPG 613
LQ+ S +A V FC+ L W ++L QT + R L+DL
Sbjct: 720 CNRGQLQSLQQSASTYAGMVTVFCKRLG--WHNMEMLLSQYQTRLSFGV--QRELLDLVR 775
Query: 614 VKI---GRARQLLNAGYSSLELIARADAKEMVAKIRH-LPLRSARNLISAAKL 662
V + RAR L G ++ +ARA ++ +R+ +P +S++ + +++
Sbjct: 776 VSLLNATRARALYAQGLCTVAELARATVADVEKALRNSVPFKSSKRAVDESEV 828
>gi|327296790|ref|XP_003233089.1| DNA-directed DNA polymerase theta [Trichophyton rubrum CBS 118892]
gi|326464395|gb|EGD89848.1| DNA-directed DNA polymerase theta [Trichophyton rubrum CBS 118892]
Length = 922
Score = 222 bits (565), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 190/658 (28%), Positives = 299/658 (45%), Gaps = 55/658 (8%)
Query: 21 EEYAGVKGQYPPTKRQ--LNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLN 78
E + V G + +K + + + +CTIEK + L+ S I++ ID++G+IV+DE HML+
Sbjct: 232 ENFIRVTGFFGGSKARTTWSDTDVAVCTIEKANSLVNSAIEDCTIDKLGVIVLDELHMLD 291
Query: 79 EPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVT 138
+ RG ++E +V+K+L L++ IQI MSAT+ N L+ ++ Y+ RP E++
Sbjct: 292 DEHRGYLIEIMVTKLLLLQQDIQIIGMSATLSNTEVLAKWLNANYYISRYRPIPVEEFLV 351
Query: 139 VDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQG-----------NLMV----- 182
+ ++ K L D S P + +++ N MV
Sbjct: 352 FEDYIYPVPTTKGLLRKMI-RPDTSSPNDVPASACRVIRKSEFRELAFPIPNAMVALACE 410
Query: 183 --------LIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKE-DLIEALKEENDGKLSTN 233
L+FC S+ AC A+ L D P T + EK DL+ +L+ G L
Sbjct: 411 TAAAGYGALVFCGSRQACQTNAV-LIGDAMPDTLDADIIEKRLDLVASLQSLPCG-LDAY 468
Query: 234 LEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYV 293
+ I GVA+HHA LT ER LI E + AG L+++ T +LAAG+NLPA+RVI+ + +
Sbjct: 469 FAKTIPRGVAFHHAGLTTEERVLIAEGFDAGILKVLVATCSLAAGINLPARRVILCGARM 528
Query: 294 GRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDP-- 351
GR+ + M +QM GRAGR G E GE+ LC T +D+ ++ A I+S + P
Sbjct: 529 GRELVGPAMLRQMRGRAGRKGKDEVGET-YLCCTNKDWEDVVGLLEAELPAIASGLAPGR 587
Query: 352 PTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQLKSPEDQQTFLE---TTLSEIVASLLA 408
+ +LE +A L S + + I+ +L + + E Q T E +TL E++ S L
Sbjct: 588 AGIKRALLEAIATKLVSGRDAINDYIRSSLLFH--NDEAQDTLFEMVQSTLQELLDSKLV 645
Query: 409 SKGTMLTMNEAGHLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVI 468
T T + A V + S + L IY +L F + LH+ ++
Sbjct: 646 KSSNDETFEP------TQLGLAIVASAFSPNDGLFIYGELKRALQAFVMDGELHIFYMFS 699
Query: 469 PLEYRIPSDGILLSRSKVYDRYTKFHPQTLRVAEALGVTENLVALNVTGKLKDEKKALL- 527
PL+ D + D LR +GV LV G + ALL
Sbjct: 700 PLQASSEIDWMAFR-----DEVHGLDDSGLRTIRLVGVDPGLVNSIAMGHASIKDPALLR 754
Query: 528 --CRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELW- 584
R + A L D+ N +AK Y I +Q FA+ + +FC+ + W
Sbjct: 755 VYTRVYTAFQLRDLSNEIPVSSIAKKYNIARGAVQTLAQNCHGFAAGMAKFCQRMG--WD 812
Query: 585 CYKQLLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIARADAKEMV 642
+L + L +L + + VK AR L G+ +L +A A E+V
Sbjct: 813 MLAVVLEHMRDRLQAGARADLLEMAQVTYVKSRTARLLWENGFKTLRSLAEAAPSELV 870
>gi|260816346|ref|XP_002602932.1| hypothetical protein BRAFLDRAFT_251779 [Branchiostoma floridae]
gi|229288246|gb|EEN58944.1| hypothetical protein BRAFLDRAFT_251779 [Branchiostoma floridae]
Length = 2215
Score = 221 bits (564), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 210/716 (29%), Positives = 335/716 (46%), Gaps = 102/716 (14%)
Query: 13 AEEFKFYLEEY---AGVK------GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRI 63
A E YL+ AGVK GQ P + + +CTIEK + L+ LI++ +I
Sbjct: 82 AREKMLYLKTLLFEAGVKVDGYMGGQSPAGG--FSSVDVAVCTIEKANSLVNRLIEDGKI 139
Query: 64 DEIG--------------LIVIDEFHMLNEPQRGPILECVVSKVLYLK----------KS 99
D++G +V+DE HM+ + RG +LE +++K+ Y+
Sbjct: 140 DQLGKSHYSPNKYTGVTGTMVVDELHMVGDSHRGYLLELLLTKIRYVTSKTGTDNKETNP 199
Query: 100 IQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADN 159
+QI MSAT+ N++ L+ +++ Y + RP +E V V ++ + + K E
Sbjct: 200 VQIVGMSATLPNLDLLARWLDAELYQTDFRPVPLTECVKVGSTMYNN-EMKKGDEDQVVG 258
Query: 160 LDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRL-----QFDRFPGTK------ 208
L Y G VL+FC +K C LA + +R P +
Sbjct: 259 LCYETVSEG-----------HSVLVFCPTKNWCEKLAETIAREFYNINRVPPEEKRTEGN 307
Query: 209 ----EYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAG 264
+ +Q +D++E L+ G L L + YGVAYHHA L+ ER +IE A+ G
Sbjct: 308 LPYVQLNRQVLQDVVEQLRRTPVG-LDHMLGRVVPYGVAYHHAGLSFDERDIIEGAFRQG 366
Query: 265 TLQIICCTSTLAAGVNLPAQRVIIRDS-YVGRDFISLNMYKQMVGRAGRTGLQESGESIM 323
L+++ TSTL++GVNLPA+RVIIR + G+ SL +YKQM GRAGR G+ GES++
Sbjct: 367 NLRVLVATSTLSSGVNLPARRVIIRTPMFHGKVLDSL-VYKQMAGRAGRKGVDSQGESVL 425
Query: 324 LCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDL-------ILEVVAANLCSSLEDVKTL 376
+CK ++ + ++++ +G P+ S + T D+ ILE++A + S DV+
Sbjct: 426 VCKE-RERSKATTLIRSGLSPVHSCLHRETGHDVSSSMKRAILEIIAGGVARSPTDVERY 484
Query: 377 IKHTLFYQLKSPEDQQTFLETTLSEIVASLLASKGTMLTMNEAGHLS------LTSIAKA 430
T+ S + ++ + + LL + L +A S T + A
Sbjct: 485 ASCTMLAAGMS-DVTTDNTDSAIHSCIQFLLEHEFIRLREIQAEDGSPTQEYQPTQLGSA 543
Query: 431 AVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEYRIPSDGILLSRSKVYDRY 490
+ + L+ D L++++DL +F L N LH+LF V P I +D L Y
Sbjct: 544 TLASALAPDEALVVFADLQRAMKSFVLENELHILFQVTP----IYNDWSNLDWYHYLCLY 599
Query: 491 TKFHPQTLRVAEALGVTENLVALNVTGKL--KDEKK----ALLCRFFHACILYDVLNFDN 544
K RVAE +GV E +A V G+L K K+ A+ RF+ A +L D+
Sbjct: 600 EKLPTHMRRVAELVGVEEGYLARAVRGRLPVKTPKQLRQLAVHKRFYTALVLQDLTQEVP 659
Query: 545 HQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELWCYKQLLTDLPQTLMYCRAPN 604
V K Y LQ+ + FA V FC L W +LL Q+ +
Sbjct: 660 LPVVVKKYSCTKGVLQSLQQSAATFAGMVTVFCSRL--GWHNLELLLSQFQSRLTFGV-- 715
Query: 605 LRALMDLPGVKIG-----RARQLLNAGYSSLELIARADAKEMVAKIRH-LPLRSAR 654
R L++L V+I RAR L NAG+ ++ ++A A+ +++ +R+ P +S R
Sbjct: 716 QRELVEL--VRISLLNGLRARTLFNAGFHTVAMLAAAEVRDVELVLRNAAPFKSGR 769
>gi|196005441|ref|XP_002112587.1| hypothetical protein TRIADDRAFT_25163 [Trichoplax adhaerens]
gi|190584628|gb|EDV24697.1| hypothetical protein TRIADDRAFT_25163, partial [Trichoplax
adhaerens]
Length = 1492
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 195/678 (28%), Positives = 318/678 (46%), Gaps = 70/678 (10%)
Query: 24 AGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRG 83
G G+ P+ + I ICTIEK + LI L++E +++++G+IVIDE H++ +P RG
Sbjct: 99 GGFMGKQAPSG-GFDNIDIAICTIEKANSLINRLMEERQLEQLGIIVIDEMHVIGDPYRG 157
Query: 84 PILECVVSKVLYL------------KKSIQIFAMSATIGNINALSTFIEGITYVENSRPT 131
+LE ++ KVLY SIQI MSAT+ N++ ++ +I G Y + RP
Sbjct: 158 YLLELLLVKVLYWTSKAKTSTTENHSTSIQIIGMSATLPNLHVMAKWINGKVYNSSFRPV 217
Query: 132 KHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIA 191
++ V + K ++ + + + I ++N +T + V H G VLIFC +K
Sbjct: 218 PLTQMVQIGKTIY-NHQMQPIRNIDSEN---EITQICLETVCH-AHG---VLIFCPTKNH 269
Query: 192 CSNLALRLQFDRFPGT---------KEYKKQE------KEDLIEALKEENDGKLSTN--L 234
C LA L P Y + + L+ L + + + L
Sbjct: 270 CEKLAQNLASQFIPHIDYLDEPVVPSSYATESNRLNLNRTKLLTTLAQLKSTPVGLDPVL 329
Query: 235 EECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVG 294
E I G+A+HHA LT ER +IE A+ +G + +I TSTL++GVNLPA+RVIIR
Sbjct: 330 ESTITKGIAFHHAGLTIEERDIIEAAFRSGIILVIIATSTLSSGVNLPARRVIIRTPIFY 389
Query: 295 RDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHM----- 349
I + Y+QMVGRAGR G+ + GESI++C ++ R S ++ A P+P+ S
Sbjct: 390 GRLIDVITYRQMVGRAGRKGIDDIGESILICNN-REMDRVSKLVTATPDPVISCFSKCKN 448
Query: 350 ---DPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQLKSPEDQQTFLETTLSEIVASL 406
D + +LEV+ + + D I TL + D L+ L + L
Sbjct: 449 PDEDNGMMKRALLEVINSGFAKTFTDTVLYISCTLL-AASTEADMSLSLDNALESTLQFL 507
Query: 407 LASKGTMLTMNEAGHLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFL 466
+ + + T + +A V + LS D LI+++DL + +F L N LH+++
Sbjct: 508 --EENEFIKRQASLQYYATKLGEATVASALSPDQALIVFADLQKARKSFVLENELHIIYQ 565
Query: 467 VIPLEYRIPSDGILLSRSKVYDRYTKFHPQTLR-VAEALGVTENLVALNVTGKLKDEKKA 525
V P+ GI Y R + P ++ V +GV E+ + G+L A
Sbjct: 566 VTPINLNDQLKGIDWYN---YLRIWEKLPDDMKYVGRIIGVAESYLTKGARGRLPQRTIA 622
Query: 526 ------LLCRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEE 579
+ RF+ A +L +++ ++ YG+ LQ+ N + F+ V FC++
Sbjct: 623 QRNTLSVHLRFYTALVLNALIHEVPLIDISNYYGLSRGQLQSLQNSAATFSGMVTIFCKK 682
Query: 580 LPELWCYKQLLTDLPQTLMYCRAPNLRALMDLPGVKI---GRARQLLNAGYSSLELIARA 636
L C+ L L Q R L DL + + RAR L NAG ++ I+++
Sbjct: 683 L----CWHNLHLLLEQFQSRLAFGIERELCDLVRISLLNGTRARALYNAGLQTVVAISKS 738
Query: 637 DAKEMVAKI--RHLPLRS 652
+ ++ +I + P RS
Sbjct: 739 SST-IIEQILYKATPFRS 755
>gi|307106974|gb|EFN55218.1| hypothetical protein CHLNCDRAFT_52598 [Chlorella variabilis]
Length = 2117
Score = 220 bits (560), Expect = 2e-54, Method: Composition-based stats.
Identities = 189/690 (27%), Positives = 316/690 (45%), Gaps = 76/690 (11%)
Query: 4 EKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRI 63
EK + L+K ++E+ G + + + +CTIEK + +I ++++ +
Sbjct: 544 EKSEHLSKVLAAINKEVKEFYGGSHSHAALTQ---TTGVIVCTIEKANIIINRMLEDQSL 600
Query: 64 DEIGLIVIDEFHMLNEPQRGPILECVVSKVLY------------LKKSIQIFAMSATIGN 111
+ +V+DE HM+ E +RG LE +++K+ Y L + +QI MSAT+ N
Sbjct: 601 GLLSCLVVDELHMVGEEERGYQLELLLTKLRYAAAAVDDEDDNYLSEGLQIIGMSATLPN 660
Query: 112 INALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDA 171
++ ++ ++ +V + RP +++ + + + + D S TG
Sbjct: 661 VDRVAKWLNAQLFVTDFRPG-----LSIKNEALEVVRTLEVPQGW----DTSKTGDSDHV 711
Query: 172 VL---HLVQGNLMVLIFCSSKIACSNLALRL--QFD------RFPGTKEYKKQEKEDLIE 220
L V+G VLIFC +K AC ++A R D R G ++ + L+
Sbjct: 712 ALLARETVEGGHSVLIFCGTKKACESMARRAARMLDIPERELRLKGWTASQRPTRASLLG 771
Query: 221 ALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVN 280
L+ G L EC G A+HHA L++ E+ ++E AY G + ++C TSTLAAGVN
Sbjct: 772 DLRRVPGGA-DPALLECFPRGAAFHHAGLSSEEKDIVETAYRCGAVSVLCATSTLAAGVN 830
Query: 281 LPAQRVIIRDSYVGR--DFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMM 338
LPA+RVIIR +Y GR + I Y+QM GRAGR G+ GE +++ + + + +
Sbjct: 831 LPARRVIIRHAYKGRSANVIDGTCYRQMAGRAGRAGIDTHGECVLINQEI-GVVVGEKLF 889
Query: 339 NAGPEPISSHMDPPTLVD-------LILEVVAANLCSSLEDVKTLIKHTLFYQLKSPEDQ 391
+G P+ S LVD +LEVV + + DV+ I+ TL L + D
Sbjct: 890 TSGASPVQS-----CLVDGKKGMKRAMLEVVVSGVVVEPSDVERYIRCTL---LAAMNDY 941
Query: 392 QTFLETTLSEIVASLLASKGTMLTMNEAGH-LSLTSIAKAAVQAGLSHDVCLIIYSDLLH 450
Q +TT++ + L A T + ++A T KA + +GL + CL++ DL
Sbjct: 942 QKVADTTIAAL-RWLGARDHTFIYWDDASRTYQPTPFGKAVLASGLPPEQCLVLKDDLAR 1000
Query: 451 NKLNFCLLNSLHMLFLVIPLEYRIPSDGILLSRSKVYDRYTKFHPQTLRVAEALGVTENL 510
+ +F + LH+ +L +P+ + L K VA +GV
Sbjct: 1001 ARQSFVMTTELHLTYLCVPVTESLA----FLDWKKFEVMLGTLSGPDASVATKVGVDRAF 1056
Query: 511 ---VALNVTGKLKDEKKALLC-RFFHACILYDVLNFDNHQ-----------KVAKMYGIQ 555
VA + G +D K +C RF+ A IL D++ + V K Y +
Sbjct: 1057 VMRVARGMRGGAQDGDKERICKRFWMALILTDIIAEASKGGCLSCAVVDVLTVQKKYAVG 1116
Query: 556 NSHLQNFLNVTSYFASKVYRFCEELPELWCYKQLLTDLPQTLMYCRAPNLRALMDLPGVK 615
+QN + + FAS V FCE L + + L+ +++ P + AL ++P VK
Sbjct: 1117 RGEVQNLQDHAARFASMVAAFCERL-GWYDLEALIVKFQSRVLHGVRPEILALSEIPFVK 1175
Query: 616 IGRARQLLNAGYSSLELIARADAKEMVAKI 645
AR L AG + E +A + + + I
Sbjct: 1176 AYTARLLYRAGLRTPEAVAAVENVDQIVSI 1205
>gi|389626699|ref|XP_003711003.1| hypothetical protein MGG_15295 [Magnaporthe oryzae 70-15]
gi|351650532|gb|EHA58391.1| hypothetical protein MGG_15295 [Magnaporthe oryzae 70-15]
Length = 963
Score = 219 bits (559), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 184/655 (28%), Positives = 303/655 (46%), Gaps = 81/655 (12%)
Query: 42 IYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQ 101
I +CT+EK + L + I + I+++ + V+DE HM+++ RG + E + +K+L L IQ
Sbjct: 259 IGVCTLEKANALANTAIDDCSINQLRVAVLDELHMIDDDHRGYLFELLSTKLLCLDHPIQ 318
Query: 102 IFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLD 161
I MSAT+ N LST++ G Y RP E++ D +V+ + +L
Sbjct: 319 IVGMSATLANAKLLSTWLCGHHYETAYRPVPIEEHLVYDGKVYSAATTSNLLRTAC---- 374
Query: 162 YSLTGSGP-------------------------DAVLHLVQGNLM----VLIFCSSKIAC 192
L G+ P +AV+ L VLIF SS+ C
Sbjct: 375 -QLNGTAPISQKPSHPMREVASSSHKELSSPVLNAVVALANETATLGYGVLIFSSSRAIC 433
Query: 193 SNLALRLQFDRFPGTKE---YKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHAD- 248
+ A+ L P + Y +++DL+ L N G L L + I YGVA+HH+D
Sbjct: 434 ESNAI-LISRTMPSINDIDPYILDKRKDLLADLASLNCG-LDPVLSQTIPYGVAFHHSDF 491
Query: 249 ----LTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGRDFISLNMYK 304
LT+ ER L+ +AY G L+I T++LAAG+NLPA+RVI+ + +GRD + +M +
Sbjct: 492 IQAGLTSEERDLVAKAYDNGILKICVATASLAAGINLPARRVILHSARMGRDLVGPSMLR 551
Query: 305 QMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHM--DPPTLVDLILEVV 362
QM GRAGR G E GE+ + C++ D +M+A +SS + D + +LEV+
Sbjct: 552 QMRGRAGRKGKDEVGETYLCCQS-SDLDNVLGLMHAELPHVSSSLTTDRQRIQRALLEVI 610
Query: 363 AANLCSSLEDVKTLIKHTLFYQLKSPEDQQTFLETTLSEIVASLLASKGTMLTMNEAGHL 422
A L +S + ++ TL Y ++ +T +ET+L+ + K +TM +
Sbjct: 611 AIRLATSRSSLDDYMRKTLLYHSADVKEIETHVETSLANL------EKLKFITMGDFQTY 664
Query: 423 SLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIP-------LEYRIP 475
T + KA V L + I+++L F + LH+L+ P + +R+
Sbjct: 665 EATQLGKAIVAGALDPEDGTFIHNELKKALQAFVMDGDLHVLYTFTPVHDFAANINWRV- 723
Query: 476 SDGILLSRSKVYDRYTKFHPQTLRVAEALGVTENLVALNVTG----KLKDEKKALL---C 528
++ LRV + LG+ ++ V G ++ DE+K L
Sbjct: 724 ----------FWNEMEGLDESGLRVLKLLGLKPTVINRMVQGGQLRQVTDEEKELARVYR 773
Query: 529 RFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELW-CYK 587
RF+ A L D+ N VA+ Y + +QN FA+ + +FCE + W
Sbjct: 774 RFYMALQLRDLCNEMPVHVVARKYDVPRGTVQNLAQNCQGFAAGMIKFCEHMG--WGAMA 831
Query: 588 QLLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIARADAKEMV 642
+L L +L +L + +K AR + G+ S+ +A AD +++V
Sbjct: 832 SVLDHFSDRLKAGAKSDLLSLAKIMFIKSRTARVFWDNGFKSVASVANADPEQLV 886
>gi|307177771|gb|EFN66768.1| ATP-dependent DNA helicase HEL308 [Camponotus floridanus]
Length = 1821
Score = 219 bits (559), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 188/630 (29%), Positives = 308/630 (48%), Gaps = 52/630 (8%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V EK + +E + G G PP + I TIEK + L+ L++E
Sbjct: 285 VVREKMYYFKDLLSDIGIRVEGFMG--GSVPPGG--FAATHVAIATIEKANSLVNRLMEE 340
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYL-----KKSIQIFAMSATIGNINAL 115
N + +G ++IDE H+L +P RG +LE +++K+ Y+ +IQ+ MSAT+ N+ L
Sbjct: 341 NDLSSLGAVIIDELHLLGDPNRGYLLELLLTKLKYMTLRNDDINIQLIGMSATLPNLVLL 400
Query: 116 STFIEGITYVENSRPTKHSEYVTVDKRVFQS---FDGK--SLTEIYADNLDYSLTGSGPD 170
+ ++ Y RP +EY V+ ++ + F K L E+ D +D L
Sbjct: 401 AKWLNAELYKTEFRPIPLNEYCKVETNIYDNKLNFVRKLEQLPELEKD-VDNML-----Q 454
Query: 171 AVLHLVQGNLMVLIFCSSKIACSNLALRLQF--------DRFPGT---KEYKKQEKEDLI 219
+ + VLIFC +K C LA ++ D G KE K+ ++ +
Sbjct: 455 LCIETISAGHSVLIFCPTKKWCEKLAEQIAAAFFKLGCKDTMLGEMLRKEINKELIQETL 514
Query: 220 EALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGV 279
E LK G L L+ I +G+A+HHA LT ER +IE A+ G+L+++ TSTL++GV
Sbjct: 515 EQLKRSPSG-LDNILKNTISFGIAFHHAGLTMDERDIIEGAFRTGSLRVLIATSTLSSGV 573
Query: 280 NLPAQRVIIRDSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMN 339
NLPA+RVIIR G + ++ YKQM+GRAGR G +GESI++CK+ + S+++
Sbjct: 574 NLPARRVIIRSPLFGNNLLNTLTYKQMIGRAGRMGKDSAGESILICKSTERNAAL-SLLS 632
Query: 340 AGPEPISSHM-DPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQLKSPEDQQTFLETT 398
A +PI S + D L+ +LE VA+ + +++D++ I TL D QTF
Sbjct: 633 ATLDPIESCLNDSMLLIRALLEAVASEVLYTVKDLELYINCTLL-SFNKQSDVQTF---- 687
Query: 399 LSEIVASLLASKGTML-TMNEAGHLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCL 457
+E + LL ++ +L T T + KA + A + L ++ +L + F L
Sbjct: 688 SNEAMRFLLDNEFLLLQTTERESRWIATPLGKACLAASIPPREGLFLFEELQKARRCFVL 747
Query: 458 LNSLHMLFLVIPLEY--RIPSDGILLSRSKVYDRYTKFHPQTLRVAEALGVTENLVALNV 515
LH+++LV PL +I + ++ ++ + RV + +GV E V +
Sbjct: 748 DTELHVIYLVTPLSAGCQIGTVDWMM----FHELWNTMSESERRVGKLIGVEERFVVSAI 803
Query: 516 TGKLKDEKK-ALLCRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVY 574
G +K K + RF+ A L+D++ V K YG LQ + +A V
Sbjct: 804 RGVIKPGKSLNIHRRFYSALALHDLVKEVPLHAVCKKYGCCRGVLQTLQQSAATYAGMVT 863
Query: 575 RFCEELPELW-CYKQLLTDLPQTLMY--CR 601
+FC++L W C + L++ L + CR
Sbjct: 864 QFCKQLG--WDCMELLVSQFQTRLQFGVCR 891
>gi|302855051|ref|XP_002959026.1| hypothetical protein VOLCADRAFT_108435 [Volvox carteri f.
nagariensis]
gi|300255592|gb|EFJ39887.1| hypothetical protein VOLCADRAFT_108435 [Volvox carteri f.
nagariensis]
Length = 2736
Score = 219 bits (559), Expect = 3e-54, Method: Composition-based stats.
Identities = 193/712 (27%), Positives = 313/712 (43%), Gaps = 115/712 (16%)
Query: 44 ICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRG-------------------- 83
+ TIEK + L+ +++E+ + E+ +++DE HM+ E +RG
Sbjct: 949 VATIEKANMLVNIMLEEDTLGELSAVIVDELHMVGEEERGYLLELLLTKLRFATSASAGE 1008
Query: 84 --------------PILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVENSR 129
P V YL++ +Q+ MSAT+ N++ ++T+++ Y R
Sbjct: 1009 GGGGGGGGGEAEEVPFDWTAVGPS-YLREGLQVIGMSATMPNVDVVATWLDAALYCTTFR 1067
Query: 130 PTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHL----VQGNLMVLIF 185
P + EYV V +R+ S G + E+ D + D V L V+ VLIF
Sbjct: 1068 PVQLQEYVKVGRRILDS-SGGLIRELVPDK---AWEDRDADHVALLTAETVREGHSVLIF 1123
Query: 186 CSSKIACSNLALRLQFDRFPGTKEYK----------------------KQEKEDLIEALK 223
C+SKI C +A + G +E + +E + L+
Sbjct: 1124 CASKILCEKVADHIARMLQIGQREPPPVTAAAGGGGGGGGGADGASPPRNTRESYVGELR 1183
Query: 224 EENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPA 283
L + + GVAYHHA L+ ER L+E AY AG + ++ TSTLAAGVNLPA
Sbjct: 1184 RLAGA--DPTLADLVARGVAYHHAGLSNEERDLVEAAYKAGAISVLTATSTLAAGVNLPA 1241
Query: 284 QRVIIRDSYVGR--DFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAG 341
+RVI R +Y+G+ + I Y+QM GRAGR G+ +GES ++C+ + ++M
Sbjct: 1242 RRVIFRHTYIGKQDNPIDATKYRQMSGRAGRAGIDTAGESYLICERNKPVAPLLALMQQK 1301
Query: 342 PEPISSHMDPPT--LVDLILEVVAANLCSSLEDVKTLIKHTLFYQLKSPEDQQTFLETTL 399
I S + + +LEVVA+ SS DVK I TL + Q +
Sbjct: 1302 ASAIGSCLTEARKGMKRAVLEVVASGAVSSGGDVKRFIGCTLLH-------AQYGFQAVA 1354
Query: 400 SEIVASLLASKGTMLTMNEAGHLSL--TSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCL 457
+A+L K + G L+ T KA + + + + L++ +DL +++ L
Sbjct: 1355 KATIAALHWLKDNGFIRVDEGSLNWGPTPFGKATLASSMPPEDALVVRADLERARMSLVL 1414
Query: 458 LNSLHMLFLVIPLEYRIPSDGILLSRSKVYDRYTKFHPQTLRVAEALGVTEN-LVALN-- 514
LH+ +LV P++ + D + +D + K RVAE +GV LV L
Sbjct: 1415 ATDLHVTYLVTPIKEDLRVDWQIY-----FDWFEKLSRVDARVAELVGVVPAYLVKLRQG 1469
Query: 515 --------VTGKLKDEKKALLCRFFHACILYDVLNFDNHQKVAKMYGI--QNSHLQNFLN 564
G EK+ + RFF A +L D++ ++VA+ YG+ + L+
Sbjct: 1470 HRGARVGGGGGAADAEKERIARRFFAAMVLNDLIQEVPLKEVAEKYGLGKEKGPLEGLQE 1529
Query: 565 VTSYFASKVYRFCEELPELWC-YKQLLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLL 623
FA+ V FCE L W + ++ + Y P + AL ++P VK RAR L
Sbjct: 1530 RAGRFAAMVAAFCERLG--WADLEVIIAKFQSRVWYGVRPEVVALTEIPYVKGHRARLLF 1587
Query: 624 NAGYSSLELIARADAKEMVAKI--------------RHLPLRSARNLISAAK 661
AG + E +A + + ++ + R R+AR ++ AK
Sbjct: 1588 KAGLRTPEAVAGCELERLIEILSAGAPRNPEHEEQQRRTERRAARMILQGAK 1639
>gi|134054980|emb|CAK36988.1| unnamed protein product [Aspergillus niger]
Length = 913
Score = 219 bits (559), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 183/681 (26%), Positives = 312/681 (45%), Gaps = 58/681 (8%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V EK + L + ++ + Y G T I +CTIEK + LI S I+E
Sbjct: 198 LVQEKLKWLRRIVQDRSIRVTGYYGGSR----TAASWADTDIAVCTIEKANSLINSAIEE 253
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIE 120
I ++G++V+DE HML++ RG +LE +V+K+L L++ QI MSAT+ N L+ ++
Sbjct: 254 CSIGDLGVVVLDELHMLDDEHRGYLLELMVTKLLLLRQRTQIIGMSATLSNTEMLAEWMN 313
Query: 121 GITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYS----LTGSGPDAVLHLV 176
+V RP +Y+ + ++ + + L + + S + PD V+
Sbjct: 314 AAYFVSTYRPIPIDDYLVYENAIYPAATSRQLFQTISKLKSMSNATLMERMPPDRVIRPS 373
Query: 177 Q----GNLM-----------------VLIFCSSKIACSNLALRLQFDRFPGTKEYKKQ-- 213
N M L+FC S+ C A+ + + P + +
Sbjct: 374 TFRELANPMTNATVALAIDTAGAGHGALVFCGSRHMCQIQAVVMS-EAMPAPADNTDELT 432
Query: 214 EKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTS 273
++ DL+ L+ G L LE+ ++ GV +HHA +TA ER LI +AY G L+ + T
Sbjct: 433 KRLDLLAELRSLPSG-LDPVLEKTLVRGVGFHHAGMTAEERELIAQAYDQGVLRTLIATC 491
Query: 274 TLAAGVNLPAQRVIIRDSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLR 333
+LAAGVNLPA+RVII + +GR+ + M +QM GRAGR G ++GE+ ++C D
Sbjct: 492 SLAAGVNLPARRVIINGARMGRELVGPAMLRQMCGRAGRKGKDDAGETYLICGD-SDLQA 550
Query: 334 FSSMMNAGPEPISSHMDPPT--LVDLILEVVAANLCSSLEDVKTLIKHTLFYQLKSPEDQ 391
++ A I S + P L +LE +A L S + +K ++ TL Y +
Sbjct: 551 VCDLLEAEMPAIESCLAPEKRGLKRALLEAIATGLVSGNDAIKEYVRCTLLYLTVDKKVA 610
Query: 392 QTFLETTLSEIVASLLASKGTMLTMNEAGHLSLTSIAKAAVQAGLSHDVCLIIYSDLLHN 451
+ + L E LA++G ++ +N+ S T + +A V + + + L ++ +L
Sbjct: 611 YAIMGSALQE-----LATEG-LVQLNDDESYSSTQLGQAVVASAFAPEDGLFVFEELKRA 664
Query: 452 KLNFCLLNSLHMLFLVIPLE--YRIPSDGILLSRSKVYDRYTKFHPQTLRVAEALGVTEN 509
F + +H+ +L PL+ P D ++ D+ LR + +GV+
Sbjct: 665 LQAFVMDGDMHIFYLFTPLQAATATPIDWLIFR-----DQLDNLDESGLRALQFVGVSPG 719
Query: 510 LV-ALNVTG-KLKD------EKKALLCRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQN 561
V + +G LK+ + + R + A L D+ N VA Y I +Q
Sbjct: 720 FVNTMAQSGASLKENTPEQMNQARIYRRAYTAFQLRDLSNEMPLSAVANRYRIPRGAVQT 779
Query: 562 FLNVTSYFASKVYRFCEELPELWCYKQLLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQ 621
FA+ + +FC+ + +L + L +L + + VK AR
Sbjct: 780 LAQQCHGFAAGIVKFCQRM-NWGMLAAVLDHMRDRLEAGARADLLEMAQVTYVKGWTARL 838
Query: 622 LLNAGYSSLELIARADAKEMV 642
L G+ +L +A ADAK++V
Sbjct: 839 LRENGFRNLRALAEADAKDLV 859
>gi|340371793|ref|XP_003384429.1| PREDICTED: DNA polymerase theta-like [Amphimedon queenslandica]
Length = 1768
Score = 219 bits (559), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 197/708 (27%), Positives = 324/708 (45%), Gaps = 88/708 (12%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+VHEK L E + G G + P + L I +CTIEK + L+ L++E
Sbjct: 222 IVHEKVNHLKSMFESVGI---KVGGFMGSHAP-QGGLASIDIAVCTIEKANSLVNRLLEE 277
Query: 61 NR--------IDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKK-------------- 98
R I ++G++V+DE HM+ + RG +LE +++K+L++ K
Sbjct: 278 RRDEKENNGGISQLGVVVVDELHMVGDRYRGYLLELLLTKLLHITKKSDKNHQPIEQGNS 337
Query: 99 ------SIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSFDGKSL 152
SIQ+ MSA++ N+N L+ +++ Y + RP E V V ++ S +L
Sbjct: 338 SINHQVSIQLIGMSASLPNLNTLAQWLDSAHYTTHYRPVPLKEMVKVGNELYDS----TL 393
Query: 153 TEIYADNLDYSLTGS-GPDAVLHLVQGNL----MVLIFCSSKIACSNLALRLQFDRFPGT 207
+ + + S TG+ + ++H+ + L +LIFC +K C L+L L G
Sbjct: 394 SSVLSTFPRESKTGNEDEEDLVHICKERLHNGHSILIFCPTKDWCEKLSLNLARRHLTGN 453
Query: 208 KEYKKQEKEDLIEALKE--ENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGT 265
+ K LI ++ L L + + G+A+HHA LT ER +IE Y +
Sbjct: 454 QVDSFLNKAGLISICEQLYHTPVGLDPILGKTLPAGIAFHHAGLTLDEREIIEGGYRSTL 513
Query: 266 LQIICCTSTLAAGVNLPAQRVIIRDSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLC 325
++I+ CTSTL++GVNLPA+ VIIR + I + Y+QM+GRAGR G+ E GESI+ C
Sbjct: 514 IKILVCTSTLSSGVNLPARLVIIRTPIFHQSLIDVQSYRQMIGRAGRKGIDEEGESILFC 573
Query: 326 KTMQDFLRFSSMMNAGPEPIS----------------SHMDPPTLVDLILEVVAANLCSS 369
K+ D + ++++ P++ + DP L +LEVVA +
Sbjct: 574 KS-SDRAKVQLLLSSTSRPVTSCLYLSPSSSSSLHSANERDP--LNRAVLEVVANGMTLG 630
Query: 370 LEDVKTLIKHTLF------YQLKSPEDQQTFLETTLSEIVASLLASKGTMLTMNE----- 418
++ + TL + ++ ED + L E + LL ++ T +
Sbjct: 631 YSEILLYLSCTLLCVELVDEEKRNKEDITDEIRLILDESLKYLLENEFISKTCSNKETPG 690
Query: 419 AGHLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEY--RIPS 476
+ + T + A + + LS L+++ + + L N LHM++LV P+ + PS
Sbjct: 691 SERYTATQLGMATIASSLSPREALVVFKEFSKARRLLVLENELHMIYLVTPVSIVNQWPS 750
Query: 477 DGILLSRSKVYDRYTKFHPQTLRVAEALGVTENLVALNVTGKLKDEKKA----LLC--RF 530
+ K Y + + VA +GV E + + GK + +A LL RF
Sbjct: 751 ----IDWYKFYCIWERLATDMKHVASIIGVQEGYIVRALQGKPAERTQAQREKLLVHQRF 806
Query: 531 FHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELW-CYKQL 589
F +L+D++ V+ YG LQ+ + FA V FC L W + L
Sbjct: 807 FTCLVLHDLVKESGLGPVSSKYGASKGFLQSLQSAAGTFAGMVTVFCNRLG--WRNMEML 864
Query: 590 LTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIARAD 637
L L++ L L+ + + RAR L N GY+SL L+AR D
Sbjct: 865 LGQFQSRLVFGIEKELVDLVRISILNGARARILYNNGYTSLSLLARTD 912
>gi|395834325|ref|XP_003790157.1| PREDICTED: LOW QUALITY PROTEIN: helicase POLQ-like [Otolemur
garnettii]
Length = 983
Score = 219 bits (557), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 166/555 (29%), Positives = 269/555 (48%), Gaps = 70/555 (12%)
Query: 151 SLTEIYADNLDYSLTGSGPDAVLHLVQ---GNLMVLIFCSSKIACSNLALRLQFDRFPGT 207
SL + D +L PD ++ LV N L+FC +K C N+A +
Sbjct: 461 SLGLVVVDEYSDTLKKMDPDHLVALVTEVIPNYSCLVFCPTKKNCENIAEMICKFLSKAY 520
Query: 208 KEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQ 267
+++++EK+++I+ LK + G L L+ I +GVAYHH+ LT+ ER+L+EEAY G L
Sbjct: 521 LKHREKEKQEVIKNLKSISSGNLCPVLKHTIPFGVAYHHSGLTSDERKLLEEAYSTGVLC 580
Query: 268 IICCTSTLAAGVNLPAQRVIIRDSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKT 327
+ CTSTLAAGVNLPA+RVI+R YV ++F+ N YKQM+GRAGR G+ GESI++ +
Sbjct: 581 LFTCTSTLAAGVNLPARRVILRAPYVAKEFLKRNRYKQMIGRAGRAGIDTIGESILILQ- 639
Query: 328 MQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLF-YQLK 386
E + ++L D+ + T F Q K
Sbjct: 640 --------------------------------EKDKQQIATNLGDIYQFMNGTFFGVQQK 667
Query: 387 SPEDQQTFLETTLSEIVASLLASKG------TMLTMNEAG-HLSLTSIAKAAVQAGLSHD 439
+++ E T+ + S L KG T + +EA + +T + +A+ + +
Sbjct: 668 ILLKEKSLWEITVESL--SYLTEKGLLQKDTTCKSEDEAQCNFHITKLGRASFKGSIDLA 725
Query: 440 VCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEYRIPSDGILLSRSKVYDR-YTKFHPQTL 498
C I+Y DL L + LH+++L P + + + +Y R +++ P
Sbjct: 726 YCNILYRDLKKGLEGLVLESLLHLIYLTTPYDLVAQCEPNWM----IYFRQFSQLSPAEQ 781
Query: 499 RVAEALGVTENLVALNVTGKLKDEK----------KALLCRFFHACILYDVLNFDNHQKV 548
VA LGV+E+ + +G+ +K + + ++ + ++L H +
Sbjct: 782 NVAALLGVSESFIGKKASGQAIRKKISKNLHNSVHLSYILQYVILSLTXNILFLSEHPES 841
Query: 549 AKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELWCYKQLLTDLPQTLMYCRAPNLRAL 608
+ LQN N+T + +EL E W Y+ LL +L + L YC L L
Sbjct: 842 PTT----XTKLQN--NLTKFKLCICLCVLQELEEFWVYRALLVELTKKLTYCVKAELIPL 895
Query: 609 MDLPGVKIGRARQLLNAGYSSLELIARADAKEMVAKIRHLPLRSARNLISAAKLHFITKM 668
M++ GV RA+QL NAGY SL +A AD + +V + HL R A+ +IS+AK+
Sbjct: 896 MEVTGVLEARAKQLYNAGYKSLTHLANADPEVLVRTVDHLSRRQAKQIISSAKMLL---H 952
Query: 669 DKVEAMKNLIQNLQK 683
+K EA++ ++ L K
Sbjct: 953 EKAEALQEEVEELLK 967
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/74 (52%), Positives = 53/74 (71%), Gaps = 1/74 (1%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V EK L+ E F++EEYAG KG++PPTKR+ KKS+YI TIEKG L+ SLI+
Sbjct: 398 IVQEKISGLSSFGVELGFFVEEYAGSKGRFPPTKRR-EKKSLYIATIEKGHSLVNSLIET 456
Query: 61 NRIDEIGLIVIDEF 74
RI +GL+V+DE+
Sbjct: 457 GRISSLGLVVVDEY 470
>gi|322701043|gb|EFY92794.1| helicase and polymerase containing protein tebichi [Metarhizium
acridum CQMa 102]
Length = 886
Score = 218 bits (555), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 180/637 (28%), Positives = 302/637 (47%), Gaps = 55/637 (8%)
Query: 42 IYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQ 101
I +CT+EK + LI + I + I ++ +V+DE H++++ RG ILE + +K+L L + +Q
Sbjct: 256 IGVCTLEKANALINTAIADGSISKLRSVVLDELHIIDDDHRGYILELIAAKLLCLGQQVQ 315
Query: 102 IFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSF--DGKSLTEIYADN 159
+ MSAT+ N+N L++++ G TY RP E++ D +VF + DG T +
Sbjct: 316 LIGMSATLPNLNLLASWLHGHTYETRYRPVPIEEHLVYDGKVFLAGPNDGLGHTPSQLGS 375
Query: 160 LDYSLTGSGP-------------DAVLHLVQG--------NLMVLIFCSSKIACSNLALR 198
D S + P D+VL+ V VL+F S+ C + A R
Sbjct: 376 QDVSAGKTAPVRRIENSVHKEFTDSVLNAVVSLAHETACMGYGVLVFAGSRGVCESDA-R 434
Query: 199 LQFDRFPGTKEYKK---QEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERR 255
P E +++ DL+ L+ + G LEE +LYGVA+HHA LT+ ER
Sbjct: 435 WISRVMPQLHELAADVLKKRLDLLGDLRSLSTGA-DPVLEETVLYGVAFHHAGLTSEERD 493
Query: 256 LIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGRDFISLNMYKQMVGRAGRTGL 315
LI AY AGT+ + T +LAAG+NL VI+ + +GR++I M +QM GRAGR G
Sbjct: 494 LIAAAYDAGTILVCIATCSLAAGINL----VILHNVKMGREYIGPAMLRQMRGRAGRQGK 549
Query: 316 QESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPT--LVDLILEVVAANLCSSLEDV 373
+ GE+ + C+ D +M+A +SS + + +LEV++ L +S E +
Sbjct: 550 TQLGETYLCCR-QPDLEHVLELMHADIPKVSSCLSTENRRIQRALLEVISIRLATSRESI 608
Query: 374 KTLIKHTLFYQLKSPEDQQTFLETTLSEIVASLLASKGTMLTMNEAGHLSLTSIAKAAVQ 433
++L +SP+ +E +L E L S G ++ + G+ + T + KA V
Sbjct: 609 SDYFSNSLLQWSQSPDFVHKGIELSLEE-----LQSMGLIMPDSSTGY-APTQLGKAIVA 662
Query: 434 AGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEYRIPSDGILLSRSKVYDRYTKF 493
+ + D + ++ +L+ F + +H+L++ P++ G ++ +
Sbjct: 663 SAIDPDDGVFVHKELVKALRAFVMDGEMHILYVFTPVQ----DFGTTVNWQVFRNEMEYL 718
Query: 494 HPQTLRVAEALGVTENLVALNVTGKL-----KDEKKA--LLCRFFHACILYDVLNFDNHQ 546
++RV + LG+ V G + +EK+ + RF+ A L D+ N
Sbjct: 719 DESSMRVLQFLGIKPTSVLRLAQGAILKETTTEEKQMARVYRRFYLAMQLRDLCNEVPIH 778
Query: 547 KVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELWC-YKQLLTDLPQTLMYCRAPNL 605
VA+ Y + +Q FA+ + +FCE + W L LM L
Sbjct: 779 AVARKYDMPRGSVQTLSQTCQGFAAGMVKFCEHMG--WGPMAAALDHFSDRLMAGARSEL 836
Query: 606 RALMDLPGVKIGRARQLLNAGYSSLELIARADAKEMV 642
AL +P +K AR GY S+ +A A+ K++V
Sbjct: 837 LALSKVPFIKSRTARVFFENGYRSVAALANANPKDLV 873
>gi|154281325|ref|XP_001541475.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150411654|gb|EDN07042.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 908
Score = 218 bits (555), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 198/711 (27%), Positives = 328/711 (46%), Gaps = 82/711 (11%)
Query: 32 PTKRQLNKKSIYICTIEKGSKLIGSLIQEN---RIDEIGLIVIDEFHMLNEPQRGPILEC 88
P RQ +KSI + GSK + + + G++V+DE HML++ RG ++E
Sbjct: 209 PKWRQ-PQKSIRVTGFFGGSKTRATWTDTDIAVSLMTWGVVVLDELHMLDDEHRGYLIEI 267
Query: 89 VVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSFD 148
+V+K+L L++ IQI MSAT+ N L+ ++ Y+ RP E++ + ++ +
Sbjct: 268 MVTKLLLLQQDIQIVGMSATLSNTEVLAKWLHANYYISKYRPIPIQEHLVYNNAIYPATS 327
Query: 149 GKSL--TEIYADNLD----YSLTGSGPDAVLHLVQGN----LMV-------------LIF 185
K T + + D YSL D +H GN MV L+F
Sbjct: 328 SKEFFRTAMQLNKPDSSPNYSLACRIIDRSMHKELGNPTSNAMVSLALETALSGYGALVF 387
Query: 186 CSSKIACSNLALRLQFDRFPGTKEYKK---QEKEDLIEALKEENDGKLSTNLEECILYGV 242
C S+ AC + A+ L P + + DLI L+ G L L+ ++ GV
Sbjct: 388 CGSRQACQSNAV-LVSHAMPDETALDNDLLERRMDLIAGLQSLPCG-LDPVLQMTVIKGV 445
Query: 243 AYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGRDFISLNM 302
A+HHA LT ER LI EAY GTL+++ T +LAAG+NLPA+RVI+ + +GRD + M
Sbjct: 446 AFHHAGLTTEERDLIAEAYDKGTLRVLIATCSLAAGINLPARRVILCGARMGRDLVGPAM 505
Query: 303 YKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDP----------- 351
+QM GRAGR G E GE+ + C+ D + ++ A I+S + P
Sbjct: 506 LRQMPGRAGRKGKDEVGETYLCCQK-DDLEAVAELLEAEMPAIASGLTPEKRGIKRFPES 564
Query: 352 -------------PTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQLKSPEDQQTFLETT 398
L +LE +A L SS E + + TL YQ + + ++ T
Sbjct: 565 TVDHPFVYLLQLMSELTRALLEAIATRLVSSRESINEYVMCTLLYQNMEAAELFSMVDKT 624
Query: 399 LSEIVASLLASKGTMLTMNEAGHLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLL 458
L ++V ++ + +A T + +A V + LS + + I+ +L +F +
Sbjct: 625 LEDLV------DNGLVDLEQAESYEPTRLGQAVVSSSLSPEDGIFIHHELKRALKSFVMD 678
Query: 459 NSLHMLFLVIPLEYRIPSDGILLSRSKVYDRYTKFHPQTLRVAEALGVTENLVALNVTGK 518
+H+ ++ PL+ P+D + S D+ +R + +GV VA + T +
Sbjct: 679 GEMHIFYMFAPLQNSSPTD---IDWSIFRDQMNNLDESGIRALQFVGVVP--VAQSGT-R 732
Query: 519 LKDEKKA-LLCRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFC 577
+KDE A + R + A L D+ N +A+ Y I ++Q FA+ + +FC
Sbjct: 733 IKDETIARIYQRAYTAFQLRDLSNEVPISTIAQRYNIPRGNVQTLAQTCHGFAAGIVKFC 792
Query: 578 EELPELWCYKQLLTDLPQTLMYCRA-PNLRALMDLPGVKIGRARQLLNAGYSSLELIARA 636
+ + W ++ D + ++ A +L + + VK AR L G+ SL +A A
Sbjct: 793 QRMG--WDMLAVVLDHMRDRLHAGARADLLEMAQVAYVKSRTARLLWENGFKSLRALAEA 850
Query: 637 DAKE-----MVAKIRHLPLRSARNLISAAKLHFITKMDKVEAMKNLIQNLQ 682
D K+ M+A+ R+ L+ A+ + AKL + K + + A N I Q
Sbjct: 851 DPKDLVPVLMMAQPRNTNLQGAQRV--PAKL--LAKAEIIVASANKIWESQ 897
>gi|317025341|ref|XP_001388880.2| DNA-directed DNA polymerase theta [Aspergillus niger CBS 513.88]
Length = 938
Score = 218 bits (555), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 179/660 (27%), Positives = 309/660 (46%), Gaps = 55/660 (8%)
Query: 42 IYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQ 101
I +CTIEK + LI S I+E I ++G++V+DE HML++ RG +LE +V+K+L L++ Q
Sbjct: 261 IAVCTIEKANSLINSAIEECSIGDLGVVVLDELHMLDDEHRGYLLELMVTKLLLLRQRTQ 320
Query: 102 IFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLD 161
I MSAT+ N L+ ++ +V RP +Y+ + ++ + + L + +
Sbjct: 321 IIGMSATLSNTEMLAEWMNAAYFVSTYRPIPIDDYLVYENAIYPAATSRQLFQTISKLKS 380
Query: 162 YS----LTGSGPDAVLHLVQ----GNLMV-----------------LIFCSSKIACSNLA 196
S + PD V+ N M L+FC S+ C A
Sbjct: 381 MSNATLMERMPPDRVIRPSTFRELANPMTNATVALAIDTAGAGHGALVFCGSRHMCQIQA 440
Query: 197 LRLQFDRFPGTKEYKKQ--EKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGER 254
+ + + P + + ++ DL+ L+ G L LE+ ++ GV +HHA +TA ER
Sbjct: 441 VVMS-EAMPAPADNTDELTKRLDLLAELRSLPSG-LDPVLEKTLVRGVGFHHAGMTAEER 498
Query: 255 RLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGRDFISLNMYKQMVGRAGRTG 314
LI +AY G L+ + T +LAAGVNLPA+RVII + +GR+ + M +QM GRAGR G
Sbjct: 499 ELIAQAYDQGVLRTLIATCSLAAGVNLPARRVIINGARMGRELVGPAMLRQMCGRAGRKG 558
Query: 315 LQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPT--LVDLILEVVAANLCSSLED 372
++GE+ ++C D ++ A I S + P L +LE +A L S +
Sbjct: 559 KDDAGETYLICGD-SDLQAVCDLLEAEMPAIESCLAPEKRGLKRALLEAIATGLVSGNDA 617
Query: 373 VKTLIKHTLFYQLKSPEDQQTFLETTLSEIVASLLASKGTMLTMNEAGHLSLTSIAKAAV 432
+K ++ TL Y + + + L E LA++G ++ +N+ S T + +A V
Sbjct: 618 IKEYVRCTLLYLTVDKKVAYAIMGSALQE-----LATEG-LVQLNDDESYSSTQLGQAVV 671
Query: 433 QAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLE--YRIPSDGILLSRSKVYDRY 490
+ + + L ++ +L F + +H+ +L PL+ P D ++ D+
Sbjct: 672 ASAFAPEDGLFVFEELKRALQAFVMDGDMHIFYLFTPLQAATATPIDWLIFR-----DQL 726
Query: 491 TKFHPQTLRVAEALGVTENLV-ALNVTG-KLKD------EKKALLCRFFHACILYDVLNF 542
LR + +GV+ V + +G LK+ + + R + A L D+ N
Sbjct: 727 DNLDESGLRALQFVGVSPGFVNTMAQSGASLKENTPEQMNQARIYRRAYTAFQLRDLSNE 786
Query: 543 DNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELWCYKQLLTDLPQTLMYCRA 602
VA Y I +Q FA+ + +FC+ + +L + L
Sbjct: 787 MPLSAVANRYRIPRGAVQTLAQQCHGFAAGIVKFCQRM-NWGMLAAVLDHMRDRLEAGAR 845
Query: 603 PNLRALMDLPGVKIGRARQLLNAGYSSLELIARADAKEMVAKIRHL-PLRSARNLISAAK 661
+L + + VK AR L G+ +L +A ADAK++V + + P ++ +N + A+
Sbjct: 846 ADLLEMAQVTYVKGWTARLLRENGFRNLRALAEADAKDLVPILMMVNPRKTQKNQLHPAE 905
>gi|378728180|gb|EHY54639.1| DNA polymerase theta subunit [Exophiala dermatitidis NIH/UT8656]
Length = 927
Score = 218 bits (554), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 173/644 (26%), Positives = 300/644 (46%), Gaps = 62/644 (9%)
Query: 42 IYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQ 101
+ +CTIEK + L+ S I+E + ++G++V+DE HMLN+ RG ++E + +K++ L+ +Q
Sbjct: 252 VAVCTIEKANSLVNSAIEEGKDAKLGILVLDELHMLNDEHRGYLMELLATKLMSLETPVQ 311
Query: 102 IFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSFDGKSL----TEIYA 157
+ MSAT+ N L+ +++ Y+ RP E++ + ++ + + K T++ A
Sbjct: 312 VVGMSATLPNPQLLAKWLKAKFYIAKYRPIPIEEHLVYNNGIYLTANAKEFFRTATQLTA 371
Query: 158 DNLDYSLTGSGPDAVLHLVQG------NLMV-----------------LIFCSSKIACSN 194
+ +L P+ + + + N MV L+FCSS+
Sbjct: 372 GD---ALPTQRPEPLRTISRSEHRDLQNPMVNAVVALAVETAVAGHGALVFCSSRQGVER 428
Query: 195 LALRLQFDRFPGTKEYKK--QEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAG 252
A L D P K ++DL+ +L G ST + + GV +HHA LT
Sbjct: 429 TAT-LIADALPVDHVDKGILGLRQDLLASLHALPGGFEST-FSKAVPCGVGFHHAGLTVE 486
Query: 253 ERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGRDFISLNMYKQMVGRAGR 312
ER L+ EAY G L+++ T +LAAG+NLPA+RVI+ + +GRD + M +QM GRAGR
Sbjct: 487 ERNLVAEAYDTGVLKVMVATCSLAAGINLPARRVILNGARMGRDLVGPAMLRQMRGRAGR 546
Query: 313 TGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPT--LVDLILEVVAANLCSSL 370
G E GE+ + C+ D + ++ A P+ S + P + +LEV+ + SS
Sbjct: 547 KGKDEVGETYLCCQKA-DLEAVAELLEAEMPPVESCLTPEKRGIKRALLEVIGIRMASSR 605
Query: 371 EDVKTLIKHTLFYQLKSPEDQQTFLETTLSEIVASLLASKGTMLTMNEAGHLSLTSIAKA 430
+ + +L + +ET++ E++ S G + L TS+ A
Sbjct: 606 TVLDRYVHSSLVWHTTEHGTVMDMVETSIQELLES-----GLIRRTEYEDCLEPTSLGTA 660
Query: 431 AVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEYRIPSDGIL-LSRSKVYDR 489
V +GLS + + ++S+L +F + LH+ +L P++ + G+ +S D
Sbjct: 661 VVASGLSPEDGVFVHSELRRALESFVMDGDLHIFYLFTPVQ----TSGLAEISWPTFRDE 716
Query: 490 YTKFHPQTLRVAEALGVTENLVA--LNVTGKLKDEKKA------LLCRFFHACILYDVLN 541
LR +G++ LV +N GKLK++ + R + A L D+ N
Sbjct: 717 LDALDESGLRAIRLIGISPALVNRLVNSGGKLKEDTPEEERLARVYRRVYSAFQLRDLCN 776
Query: 542 FDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELWCYKQLLTDLPQTLMYCR 601
+V+ + + H+QN FA+ + +FCE + + L L L R
Sbjct: 777 EMPVHEVSVKFSVPRGHIQNLAQTCHGFAAGMIKFCERM----GWGMLAAVLEHMLDRLR 832
Query: 602 A---PNLRALMDLPGVKIGRARQLLNAGYSSLELIARADAKEMV 642
A +L + + VK AR G+ S+ + AD +V
Sbjct: 833 AGARADLLEMAQVAFVKSRMARIFWENGFKSIRALGEADPHTLV 876
>gi|344282241|ref|XP_003412882.1| PREDICTED: DNA polymerase theta [Loxodonta africana]
Length = 2567
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 188/700 (26%), Positives = 336/700 (48%), Gaps = 92/700 (13%)
Query: 13 AEEFKFYLE---EYAGVK-----GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRID 64
A+E K+YL+ + G+K G PT + I +CTIE+ + LI LI EN++D
Sbjct: 152 AKEKKYYLQSLFQEVGIKVDGYMGSTSPTG-HFSSLDIAVCTIERANGLINRLIGENKMD 210
Query: 65 EIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKK---------------SIQIFAMSATI 109
+G +V+DE HML +P RG +LE +++KV Y+ + ++QI MSAT+
Sbjct: 211 LVGTVVVDELHMLGDPHRGYLLELLLTKVCYITQKSASCQADLASPQPNAVQIIGMSATL 270
Query: 110 GNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSF-----DGKSLTEIYADNLDYSL 164
N+ +++++ Y + RP E + + ++ S + + + ++ A +D
Sbjct: 271 PNLELVASWLNAELYHTDFRPVPLLESIKIGSSIYDSSMKLVREFQPMLQVKAVKIDKFQ 330
Query: 165 TGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKE 224
+ D + +V+ + K L + R P
Sbjct: 331 RSA--DKTIGMVKPRECPPVILDQK---GLLEVMDHLKRLPSG----------------- 368
Query: 225 ENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQ 284
L + L++ + +GVA+HHA LT ER +IE A+ G ++++ TSTL++GVNLPA+
Sbjct: 369 -----LDSVLQKTVPWGVAFHHAGLTFEERDIIEGAFRQGLIRVLAATSTLSSGVNLPAR 423
Query: 285 RVIIRDS-YVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPE 343
RVIIR + GR L Y+QMVGRAGRTG+ GESI++CK + + +++ +
Sbjct: 424 RVIIRTPVFSGRSLDVLT-YQQMVGRAGRTGVDTVGESILVCKDSEKS-KGIALLQGSLK 481
Query: 344 PISSHMD-------PPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQLKSPEDQQTFLE 396
P+ S + +++ ILE++ + S+ +D++T T F E +Q
Sbjct: 482 PVRSCLRRQEGEEVTASMIRAILEIIVGGVASTSQDMQTYASCT-FLAASMKEGKQGIQR 540
Query: 397 TTLSEIVASLLAS-----KGTMLTMNEAGHLS------LTSIAKAAVQAGLSHDVCLIIY 445
S + ++ A + + ++EAG + T + A + + LS L I+
Sbjct: 541 NQDSVQLGAVEACVRWLLENEFIQVSEAGDGTEGKVYHPTHLGSATLSSSLSPVDTLDIF 600
Query: 446 SDLLHNKLNFCLLNSLHMLFLVIPLEYRIPSDGILLSRSKVYDRYTKFHPQTLRVAEALG 505
+DL +F L N LH+L+LV P + D + + + + K RVAE +G
Sbjct: 601 ADLQRAMKSFVLENDLHILYLVTP----VFEDWTTIDWYRFFCLWEKLPTSMKRVAELVG 656
Query: 506 VTENLVALNVTGKL--KDEKK----ALLCRFFHACILYDVLNFDNHQKVAKMYGIQNSHL 559
V E +A V GK+ + E++ A+ RFF + +L D+++ +++ + YG +
Sbjct: 657 VEEGFLARCVKGKVVARTERQHRQMAIHKRFFTSLVLLDLISEVPLKEINQKYGCNRGQI 716
Query: 560 QNFLNVTSYFASKVYRFCEELPELWCYKQ-LLTDLPQTLMYCRAPNLRALMDLPGVKIGR 618
Q+ + +A + F L W + LL+ + L + L L+ + + R
Sbjct: 717 QSLQQSAAVYAGMITVFSNRLG--WHNMELLLSQFQKRLTFGVQRELCDLIRVSLLNAQR 774
Query: 619 ARQLLNAGYSSLELIARADAKEMVAKIRH-LPLRSARNLI 657
AR L +G+ ++ +ARA+ E+ A +++ +P +SAR +
Sbjct: 775 ARFLYASGFLTVADLARANTAEVEAVLKNAVPFKSARKAV 814
>gi|350638044|gb|EHA26400.1| hypothetical protein ASPNIDRAFT_36173 [Aspergillus niger ATCC 1015]
Length = 932
Score = 217 bits (553), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 179/660 (27%), Positives = 309/660 (46%), Gaps = 55/660 (8%)
Query: 42 IYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQ 101
I +CTIEK + LI S I+E I ++G++V+DE HML++ RG +LE +V+K+L L++ Q
Sbjct: 261 IAVCTIEKANSLINSAIEECSIGDLGVVVLDELHMLDDEHRGYLLELMVTKLLLLRQRTQ 320
Query: 102 IFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLD 161
I MSAT+ N L+ ++ +V RP +Y+ + ++ + + L + +
Sbjct: 321 IIGMSATLSNTEMLAEWMNAAYFVSTYRPIPIDDYLVYENAIYPAATSRQLFQTISKLKS 380
Query: 162 YS----LTGSGPDAVLHLVQ----GNLMV-----------------LIFCSSKIACSNLA 196
S + PD V+ N M L+FC S+ C A
Sbjct: 381 MSNATLMERMPPDRVIRPSTFRELANPMTNATVALAIDTAGAGHGALVFCGSRHMCQIQA 440
Query: 197 LRLQFDRFPGTKEYKKQ--EKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGER 254
+ + + P + + ++ DL+ L+ G L LE+ ++ GV +HHA +TA ER
Sbjct: 441 VVMS-EAMPAPADNTDELTKRLDLLAELRSLPSG-LDPVLEKTLVRGVGFHHAGMTAEER 498
Query: 255 RLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGRDFISLNMYKQMVGRAGRTG 314
LI +AY G L+ + T +LAAGVNLPA+RVII + +GR+ + M +QM GRAGR G
Sbjct: 499 ELIAQAYDQGVLRTLIATCSLAAGVNLPARRVIINGARMGRELVGPAMLRQMCGRAGRKG 558
Query: 315 LQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPT--LVDLILEVVAANLCSSLED 372
++GE+ ++C D ++ A I S + P L +LE +A L S +
Sbjct: 559 KDDAGETYLICGD-SDLQAVCDLLEAEMPAIESCLAPEKRGLKRALLEAIATGLVSGNDA 617
Query: 373 VKTLIKHTLFYQLKSPEDQQTFLETTLSEIVASLLASKGTMLTMNEAGHLSLTSIAKAAV 432
+K ++ TL Y + + + L E LA++G ++ +N+ S T + +A V
Sbjct: 618 IKEYVRCTLLYLTVDKKVAYGIMGSALQE-----LATEG-LVQLNDDESYSSTQLGQAVV 671
Query: 433 QAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLE--YRIPSDGILLSRSKVYDRY 490
+ + + L ++ +L F + +H+ +L PL+ P D ++ D+
Sbjct: 672 ASAFAPEDGLFVFEELKRALQAFVMDGDMHIFYLFTPLQAATATPIDWLIFR-----DQL 726
Query: 491 TKFHPQTLRVAEALGVTENLV-ALNVTG-KLKD------EKKALLCRFFHACILYDVLNF 542
LR + +GV+ V + +G LK+ + + R + A L D+ N
Sbjct: 727 DNLDESGLRALQFVGVSPGFVNTMAQSGASLKENTPEQMNQARIYRRAYTAFQLRDLSNE 786
Query: 543 DNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELWCYKQLLTDLPQTLMYCRA 602
VA Y I +Q FA+ + +FC+ + +L + L
Sbjct: 787 MPLSAVANRYRIPRGAVQTLAQQCHGFAAGIVKFCQRM-NWGMLAAVLDHMRDRLEAGAR 845
Query: 603 PNLRALMDLPGVKIGRARQLLNAGYSSLELIARADAKEMVAKIRHL-PLRSARNLISAAK 661
+L + + VK AR L G+ +L +A ADAK++V + + P ++ +N + A+
Sbjct: 846 ADLLEMAQVTYVKGWTARLLRENGFRNLRALAEADAKDLVPILMMVNPRKTQKNQLHPAE 905
>gi|242803099|ref|XP_002484105.1| DNA-directed DNA polymerase theta, putative [Talaromyces stipitatus
ATCC 10500]
gi|218717450|gb|EED16871.1| DNA-directed DNA polymerase theta, putative [Talaromyces stipitatus
ATCC 10500]
Length = 946
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 171/632 (27%), Positives = 294/632 (46%), Gaps = 40/632 (6%)
Query: 42 IYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQ 101
I +CTIEK + L+ + I E ID++ ++V+DE HML++ RG +LE +V+K+L L++ IQ
Sbjct: 271 IAVCTIEKANALVNTAIAECNIDDLAVVVVDEIHMLDDDSRGYLLELMVTKLLLLQQDIQ 330
Query: 102 IFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYAD--- 158
I MSAT+ N L+ ++ + RP EY+ + ++ + K +
Sbjct: 331 IIGMSATLSNTELLAEWLRASFHASTHRPVPIEEYLVYENSIYPAISSKEFFQTATKLQS 390
Query: 159 ---------NLDYS----LTGSGPDAVLHLV----QGNLMVLIFCSSKIACS-NLALRLQ 200
+D S L+ +A++ L L+FC S+ AC N L +
Sbjct: 391 VQDTVPPCRRIDQSPFKALSHPTANAMVSLAIETATAGFGALVFCGSRHACQMNAQLISE 450
Query: 201 FDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEA 260
P T + + E+ + L + I+ GVA+HHA LT ER L+ EA
Sbjct: 451 AMPSPSTLDSELLERRLDLLDELGSLPCGLDPAFQNTIIKGVAFHHAGLTTEERDLVAEA 510
Query: 261 YLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGRDFISLNMYKQMVGRAGRTGLQESGE 320
Y GT+++I T +LAAGVNLPA+RVI++ + +GRD + + +QM GRAGR G GE
Sbjct: 511 YDQGTIKVIVATCSLAAGVNLPARRVIMQGARMGRDIVGPALLRQMRGRAGRKGKDTVGE 570
Query: 321 SIMLCKTMQDFLRFSSMMNAGPEPISSHM--DPPTLVDLILEVVAANLCSSLEDVKTLIK 378
+ ++C+ D S + +A I S + D + +LE +A L S E + ++
Sbjct: 571 TYLICQ-QADLEAISEIWDAETPAIDSCLAQDNKGVKRALLEGIATRLVSGCEAIDEFMR 629
Query: 379 HTLFYQLKSPEDQQTFLETTLSEIVASLLASKGTMLTMNEAGHLSL--TSIAKAAVQAGL 436
TL + +S + + ++++L E++ + L + + + G+ S T + A V +
Sbjct: 630 CTLLCKTRSEAEMEKLIDSSLQELIDTEL------IHLRDDGNNSYESTKLGAAIVASSF 683
Query: 437 SHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEYRIPSD-GILLSRSKVYDRYTKFHP 495
+ D + +Y +L F + +H+ ++ PL + ++ L+ R ++
Sbjct: 684 APDDGVFVYEELKRALQAFVMDGEMHIFYMFTPLSVAMNTNIDWLIFRDQLDLLDESGIR 743
Query: 496 QTLRVAEALGVTENLVALNVTGKLKDEKKALLCRFFH----ACILYDVLNFDNHQKVAKM 551
L V G N+V K D K+ L R + A L D+ N +A
Sbjct: 744 ALLFVGVQPGFVNNMVHTGRNFKEDDPKQQQLSRIYRRAYAAFQLRDLCNEVPLSTIASR 803
Query: 552 YGIQNSHLQNFLNVTSYFASKVYRFCEELPELW-CYKQLLTDLPQTLMYCRAPNLRALMD 610
Y + +Q FA+ + +FC+ + W +L + L +L +
Sbjct: 804 YNVPRGIVQTLAQTCHGFAAGMVKFCQRMG--WGMLAVVLEHMRDRLQAGARDDLLEMAQ 861
Query: 611 LPGVKIGRARQLLNAGYSSLELIARADAKEMV 642
+ VK AR L G+ S+ +A ADAK++V
Sbjct: 862 VTHVKSWTARLLWENGFRSVRALASADAKDIV 893
>gi|67524563|ref|XP_660343.1| hypothetical protein AN2739.2 [Aspergillus nidulans FGSC A4]
gi|40743851|gb|EAA63037.1| hypothetical protein AN2739.2 [Aspergillus nidulans FGSC A4]
gi|259486348|tpe|CBF84114.1| TPA: DNA-directed DNA polymerase theta, putative (AFU_orthologue;
AFUA_1G05260) [Aspergillus nidulans FGSC A4]
Length = 901
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 183/698 (26%), Positives = 307/698 (43%), Gaps = 103/698 (14%)
Query: 3 HEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENR 62
H +++ + K+ F+ G K T I +CTIEK + LI + I+E
Sbjct: 223 HHRWRKMQKSIRISGFF----GGSK-----TTASWEDTDIAVCTIEKANSLINTAIEECS 273
Query: 63 IDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIG--NINALSTFIE 120
I E+G +V+DE HML++ RG +LE +V+K+L L++ IQI MSATI N L+ +I
Sbjct: 274 IGELGAVVLDELHMLDDENRGYLLELMVTKLLLLQQDIQIIGMSATISVKNTELLADWIN 333
Query: 121 GITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSG------------ 168
+V RP EY+ D ++ + + L + + LT +G
Sbjct: 334 ARYFVSTYRPVPVDEYLIYDNAIYPAATSRQLFQTIS-----KLTATGGPFLSEAVPPQR 388
Query: 169 ---PDAVLHLVQ--GNLMV-------------LIFCSSKIACS-NLALRLQFDRFPGTKE 209
P A L N MV L+FC S++AC + AL + PGT
Sbjct: 389 TIKPSAFRELSNPMSNAMVAMAIDTVTAGYGALVFCGSRVACQVHAALISEAMPDPGTLG 448
Query: 210 YKKQEKE-DLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQI 268
+ K DL+ L+ G L LE+ ++ GV +H+A +T ER I +AY G L++
Sbjct: 449 AEDLGKRLDLLAELRSLPSG-LDPALEKTLIKGVGFHNAGMTTEEREAIAQAYDQGVLKV 507
Query: 269 ICCTSTLAAGVNLPAQRVIIRDSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTM 328
+ T +LAAGVNLPA+RVII + +GR+ + M +QM GRAGR G E+GE+ ++
Sbjct: 508 LVATCSLAAGVNLPARRVIINGARMGRELVGPAMLRQMCGRAGRKGKDEAGETYLIVGK- 566
Query: 329 QDFLRFSSMMNAGPEPISSHMDPPT--LVDLILEVVAANLCSSLEDVKTLIKHTLFYQLK 386
D ++ A I S + P L +LE +A L S + +K +K TL Y+
Sbjct: 567 SDLQAVCDLLEADMPAIESCLAPEKRGLKRALLEAIATGLVSGVAAIKEYVKCTLLYRTV 626
Query: 387 SPEDQQTFLETTLSEIVASLLASKGTMLTMNEAGHLSLTSIAKAAVQAGLSHDVCLIIYS 446
+ + +++ L E+ ++ ++ +NE T + +A V + + D L +Y
Sbjct: 627 DKKLSYSIMDSALQEL------AEEKLIQLNEDESYVATQLGQAVVASAFAPDDGLFMYE 680
Query: 447 DLLHNKLNFCLLNSLHMLFLVIPLEYRIPSDGILLSRSKVYDRYTKFHPQTLRVAEALGV 506
+L F + +H+ ++ PL+ + + D +R + +GV
Sbjct: 681 ELKRALQAFVMDGDMHVFYMFTPLQAAAQTQ---IDWPTFRDLLDTLDDSGIRALQFVGV 737
Query: 507 TENLV--ALNVTGKLKDE------KKALLCRFFHACILYDVLNFDNHQKVAKMYGIQNSH 558
V + LK++ + + R + A L D+ N ++ Y I
Sbjct: 738 NPGFVNSMVQSGASLKEDTPEQVTQARIYRRAYTAFQLRDLSNEVPLPVISSRYKIPRGT 797
Query: 559 LQNFLNVTSYFASKVYRFCEELPELWCYKQLLTDLPQTLMYCRAPNLRALMDLPGVKIGR 618
+Q FA+ + +FC+ + W
Sbjct: 798 IQTLAQQCHGFAAGIVKFCQRMGWGWT--------------------------------- 824
Query: 619 ARQLLNAGYSSLELIARADAKEMVAKIRHL-PLRSARN 655
AR L + G+ +L +A AD K++V ++ + P ++ RN
Sbjct: 825 ARLLRDNGFRNLRALAEADPKDVVPVLKMVNPRKTQRN 862
>gi|168066269|ref|XP_001785063.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162663356|gb|EDQ50124.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1683
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 184/673 (27%), Positives = 307/673 (45%), Gaps = 87/673 (12%)
Query: 41 SIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPIL-------------- 86
S+ +CTIEK + L+ L++E R+ E+ ++VIDE HM+ + RG +L
Sbjct: 160 SVAVCTIEKANSLVNKLLEEGRLSELAILVIDELHMVGDTDRGYLLELLLTKLRFAAGGG 219
Query: 87 ECVVSKVLYLKKS-----------IQIFAMSATIGNINALSTFIEGITYVENSRPTKHSE 135
EC + Y K +QI MSAT+ N++ ++T+++ Y RP E
Sbjct: 220 EC--NSPGYSSKENRGSSSSRNTELQIVGMSATMPNVSDVATWLQAALYQTVFRPVPLEE 277
Query: 136 YVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHL----VQGNLMVLIFCSSKIA 191
++ V ++ K + + + + L+G PD ++ L V VL+FCSS+
Sbjct: 278 FIKVGHTIYN----KKMEFVRSIKKNADLSGKDPDHLVELCHEVVSEGHSVLVFCSSRKG 333
Query: 192 CSNLALRLQFDRFPGT-----KEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHH 246
C A + P T K + +E L++ G L L + + GVAYHH
Sbjct: 334 CETTARHISKFLPPFTIVERDKMIGPIDGNAAVEELRKCPAG-LDPVLADTLPAGVAYHH 392
Query: 247 ADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGRDFISLNMYKQM 306
A LT ER ++E + +G ++++ TSTLAAGVNLPA+RVI R +GRDF+ Y+QM
Sbjct: 393 AGLTGEERDIVEACFKSGVVRVLVATSTLAAGVNLPARRVIFRQPKIGRDFLDATRYRQM 452
Query: 307 VGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHM--DPPTLVDLILEVVAA 364
GRAGR G+ GESI++CK ++ R M+ + + S + D ++ +LEVVA
Sbjct: 453 AGRAGRAGIDTKGESILICKP-EEVKRMEEMIRQECKALCSCLADDKNGMIRALLEVVAG 511
Query: 365 NLCSSLEDVKTLIKHTLFYQLKSPEDQQTFLETTLSEIVASLLASKGTMLTMNEAGHL-S 423
+ + DV+ ++ TL + E+ + +L + L + + L +
Sbjct: 512 GVVQTAADVQRYVRCTLLNATQPFEEVVKAAQESLRWLCHKQL------VEWDRTSRLYT 565
Query: 424 LTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEYRI-PSDGILLS 482
T + +AA + LS + L++Y DL + F L + LH+L+ V P I P G+ S
Sbjct: 566 TTPLGRAAFSSSLSPEESLVVYEDLAKAREGFVLASDLHLLYEVTPTYVDIEPDWGVYYS 625
Query: 483 R--------SKVYDRYTKFHPQTLRVAEALGVTENLV---------------------AL 513
R V +R P +R+A + + +
Sbjct: 626 RFMELSHTDQAVGNRVGVVEPFLMRMAHGVPLLQQGGNGRPRGGKISKAKISPPFQKHKW 685
Query: 514 NVTG--KLKDEKKALLC-RFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFA 570
N +G L E+ +C RF+ + +L ++ ++ + + + +Q + FA
Sbjct: 686 NSSGAAPLPVEQMLRVCKRFYVSLMLSKLVQEVPLMEICESFKVPRGTVQALQDSAGRFA 745
Query: 571 SKVYRFCEELPELWC-YKQLLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSS 629
V FCE L W + L + + + + + L ++P VK RAR L AG S
Sbjct: 746 GMVGAFCERLG--WSDMEGLFSKFQKRVSFGVKSEIVDLTEIPFVKAARARALFKAGLRS 803
Query: 630 LELIARADAKEMV 642
+ IA A E++
Sbjct: 804 VHAIAEASLPEII 816
>gi|443695787|gb|ELT96621.1| hypothetical protein CAPTEDRAFT_226809 [Capitella teleta]
Length = 1818
Score = 216 bits (549), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 189/661 (28%), Positives = 314/661 (47%), Gaps = 63/661 (9%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V EK L ++ ++ + G GQ P L I +CTIEK + LI L++E
Sbjct: 67 VVREKVHYLQDMFQDAGVRVDGFMG--GQNPAGG--LKMVDIAVCTIEKANSLINRLMEE 122
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKS---IQIFAMSATIGNINALST 117
+ ++G +V+DE HM+ + QRG +LE +++KV +L + +Q+ MSAT+ N+ L+
Sbjct: 123 REMAQLGCLVVDELHMVGDAQRGYLLELLLTKVRFLSQQAAEVQLIGMSATLPNLALLAK 182
Query: 118 FIEGITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQ 177
++ Y N RP +E + + + S SL + + L+G D V+ L
Sbjct: 183 WLSADLYSTNFRPVPLTEMIKIGSSICDS----SLAVVRELSPVQGLSGD-EDQVISL-- 235
Query: 178 GNLMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEEC 237
C I + + L + ED++E LK G + L
Sbjct: 236 --------CLETIQQGAIPIDLDAVKV-----------EDVLEQLKRSPVG-VDHVLGRT 275
Query: 238 ILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGRDF 297
+ GVAYHHA LT ER +IE + G L+++ TSTL++GVNLPA+RVIIR D
Sbjct: 276 VAMGVAYHHAGLTFDERDIIEGGFRRGALRVLVATSTLSSGVNLPARRVIIRTPTFHGDV 335
Query: 298 ISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMD-----PP 352
I YKQM GRAGRTG+ +GESI++CK + R ++ + P++S +
Sbjct: 336 IETLTYKQMSGRAGRTGVDTAGESILVCKPSEK-ARAMKLVTSELTPVNSCLASRGSLSG 394
Query: 353 TLVDLILEVVAANLCSSLEDVKTLIKHTLFYQLKSPEDQQTFLETTLSEIVASLLASKGT 412
++ ILEVV + + ++ E V+ + TL D+ +E E +A LL S+
Sbjct: 395 SMKRAILEVVVSGVAATSESVRRYAQCTLLAASMEEGDEDDSIE----ECIAFLLQSEFI 450
Query: 413 MLTMNEAGHL--SLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPL 470
+ L T + A + + L+ D L ++++L + F L N LH++++V P+
Sbjct: 451 STQGDSTDGLLYHATPLGSAVLSSSLAPDEGLAVFAELQKARRCFVLENDLHLVYIVTPI 510
Query: 471 EYRIPSDGILLSRSKVYDRYTKFHPQTLRVAEALGVTENLVALNVTGKLKDEKKALL--- 527
Y S G + + + P V++ +GV E+ ++ V G+L + +
Sbjct: 511 -YMCNSLGN-IDWYQYLRMWEALSPGFRSVSDLVGVKESFLSRAVQGRLPTKTSEQIRTL 568
Query: 528 ---CRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELW 584
RF+ A L+D++N +VA Y LQ+ + FA + FC+ L W
Sbjct: 569 QIHKRFYTALALHDLVNEVPLIEVAAEYKCTKGTLQSLQQAAATFAGMITVFCQRLG--W 626
Query: 585 CY-KQLLTDLPQTLMYCRAPNLRALMDLPGVKI---GRARQLLNAGYSSLELIARADAKE 640
+ LL D L + R L+DL V + RAR L ++G ++ +A A+ ++
Sbjct: 627 HHLAVLLEDFQSRLTFGVQ---RELVDLVRVSLLTGVRARTLFDSGLQTVAQLANAEPRQ 683
Query: 641 M 641
+
Sbjct: 684 V 684
>gi|428169897|gb|EKX38827.1| hypothetical protein GUITHDRAFT_115154 [Guillardia theta CCMP2712]
Length = 910
Score = 216 bits (549), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 215/717 (29%), Positives = 334/717 (46%), Gaps = 116/717 (16%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEE-YAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQ 59
+ EK SL A + YAG G + T+ + I +CTIEK + L+ LI+
Sbjct: 208 LAQEKTLSLKHTASPLNIKVTGFYAGKGGPFAGTEAE-----IAVCTIEKANSLVNRLIE 262
Query: 60 ENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFI 119
E+R L R P +++ MSATI N L++++
Sbjct: 263 ESRQAS-----------LQWSFRAP--------------DVKVLCMSATISNPEDLASWL 297
Query: 120 EGITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTG---------SGPD 170
Y RP + +EY+ V+ V + K L + +++ +SL PD
Sbjct: 298 NASVYKTEFRPIELAEYIFVNGNVLPA---KLLRDDKCNSIPFSLAQRRVGPTFGLKDPD 354
Query: 171 AVLHL----VQGNLMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQE---KEDLIE--- 220
V L ++ + LIFCSSK A + A L P KE K+ ++L+E
Sbjct: 355 LVGALAYEAIRTSQSTLIFCSSKSATESCAKFLAGLFAP--KEDKRNPVRVSDELVEKRA 412
Query: 221 ALKEE---NDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAA 277
A+ EE +G L +L+ I +G A+HHA LT ER ++E + AGT+ ++ TSTLAA
Sbjct: 413 AILEELARCEGGLDPSLKATIPHGAAFHHAGLTLEERTILENGFRAGTIPVLAATSTLAA 472
Query: 278 GVNLPAQRVIIRDSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSM 337
GVNLPA RVI+R VG + + YKQM GRAGRTGL+ GES ++ K+ Q L S M
Sbjct: 473 GVNLPASRVILRSPNVGMETLDPMRYKQMSGRAGRTGLETMGESYLMIKSSQWALAKSVM 532
Query: 338 MNAGPEPISSHMDP--PTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQLKSPEDQQTF- 394
+ P+ S + L +ILE V L SL+ +K +K TL + +D+ F
Sbjct: 533 LAPMPQLTSCLLSSGHGILRRMILEAVVHGLALSLDSLKNFMKKTLLFV----QDKDIFK 588
Query: 395 -LETTLSEIVAS--LLASKGTMLTMNEAGHLSL----TSIAKAAVQAGLSHDVCLIIYSD 447
L +L + L + + + +E S+ T++ +A V +GL+ + L +Y+D
Sbjct: 589 HLRGSLEWLERKDFLRIKRPEVFSDSEEKCESVFVEATALGQATVSSGLAPEQGLQVYAD 648
Query: 448 LLHNKLNFCLLNSLHMLFLVIPLEYRI-PSDGILLSRSKVYDRYT---KFHPQTLR-VAE 502
L + L + H+LFL+ P+ + I PS Y RY K P LR +A+
Sbjct: 649 LSIARQGLVLSDEAHLLFLLTPVYHGIQPS----------YKRYVDMIKGLPAELRAIAQ 698
Query: 503 ALGVTENLVALN--------------VTGKLKDE-------------KKALLCRFFHACI 535
A+GV E+L+A + V K KD+ + +L RF+ +
Sbjct: 699 AVGVDEDLLAWSARQEASGVLWQQGTVPPKYKDKNNQTSNSSHLLLRRVEILERFWVTLM 758
Query: 536 LYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELWCYKQLLTDLPQ 595
L D++ Q V Y + +Q + S F+ +V FC +L W + L + +
Sbjct: 759 LRDLILEAPIQDVCSRYKMSRGTVQTLQGLASTFSGQVSIFCSKL-HWWQLQVLCSSFQE 817
Query: 596 TLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIARADAKEMVAKIR-HLPLR 651
L P++ +L +P VK RAR L NAG +S+E +A A+ + +V +R +P R
Sbjct: 818 RLEVGGQPDIISLARIPHVKNVRARALFNAGITSVEALAAAEEEHIVEALRCVMPFR 874
>gi|327354466|gb|EGE83323.1| DNA-directed DNA polymerase theta [Ajellomyces dermatitidis ATCC
18188]
Length = 757
Score = 215 bits (548), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 147/507 (28%), Positives = 253/507 (49%), Gaps = 40/507 (7%)
Query: 33 TKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSK 92
T+ I +CTIEK + L+ + I+E +I+++G++V+DE HML++ RG ++E +V+K
Sbjct: 260 TRATWADTDIAVCTIEKANSLVNTAIEECKINDLGVVVLDELHMLDDEHRGYLIEIMVTK 319
Query: 93 VLYLKKSIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSFDGKSL 152
++ LK+ IQI MSAT+ N L+ ++ Y+ RP E++ + ++ + K
Sbjct: 320 LMLLKQDIQIVGMSATLSNTEVLAKWLRANYYISKYRPIPIQEHLVYNNEIYPATSSKEF 379
Query: 153 --TEIYADNLDYS-----------------LTGSGPDAVLHLVQGNLM----VLIFCSSK 189
T + D S L S +A++ L + L+FC S+
Sbjct: 380 FRTATQLNKPDPSQRNSLACRIIDRSTYKELATSTANAMVSLALETALSGYGALVFCGSR 439
Query: 190 IACSNLALRLQFDRFPGTKEYKK---QEKEDLIEALKEENDGKLSTNLEECILYGVAYHH 246
AC + A+ L P K + + DLI L+ G + ++ ++ GVA+HH
Sbjct: 440 QACQSNAI-LISQAMPDETMLDKDLSERRMDLIAGLQSLPCG-IDPVFQKTVIKGVAFHH 497
Query: 247 ADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGRDFISLNMYKQM 306
A LT ER LI EAY G L+++ T +LAAG+NLPA+RVI+ + +GRD + M +QM
Sbjct: 498 AGLTTEERDLIAEAYDKGILRVLVATCSLAAGINLPARRVILCGARMGRDLVGPAMLRQM 557
Query: 307 VGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPT--LVDLILEVVAA 364
GRAGR G E GE+ +LC+ D + ++ A I+S + P + +LE +A
Sbjct: 558 RGRAGRKGKDEVGETYLLCQK-DDLEAVAELLEAEMPAIASGLTPEKRGIKRALLEAIAT 616
Query: 365 NLCSSLEDVKTLIKHTLFYQLKSPEDQQTFLETTLSEIVASLLASKGTMLTMNEAGHLSL 424
L SS E V + TL YQ ++ + +++TL E+V ++ + + +
Sbjct: 617 RLVSSRETVNEYVTCTLLYQNMETDELFSMVDSTLKELV------DHGLVDLKQDEYFEP 670
Query: 425 TSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEYRIPSDGILLSRS 484
T + +A V + LS + + I+ +L +F + +H+ ++ PL+ P+D + S
Sbjct: 671 TQLGQAVVSSSLSPEDGIFIHDELKRALKSFVMDGEMHIFYMFAPLQNSAPAD---IDWS 727
Query: 485 KVYDRYTKFHPQTLRVAEALGVTENLV 511
D+ +R + +GV V
Sbjct: 728 IFRDQMNNLDESGIRALQLVGVEPAFV 754
>gi|67471598|ref|XP_651740.1| hypothetical protein [Entamoeba histolytica HM-1:IMSS]
gi|56468512|gb|EAL46353.1| hypothetical protein EHI_007040 [Entamoeba histolytica HM-1:IMSS]
Length = 848
Score = 214 bits (546), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 182/681 (26%), Positives = 324/681 (47%), Gaps = 61/681 (8%)
Query: 6 YQSLAKAAEEFKFYLEEY-----AGVKGQYPPTKRQLNKK-SIYICTIEKGSKLIGSLIQ 59
Y S+A+ EE Y +E +KG + R ++K+ I ICTIEKG+ LI LI+
Sbjct: 150 YVSMAQEKEE---YFQEILKSIKINIKGYFQN--RGIDKEFDIGICTIEKGNGLINKLIE 204
Query: 60 ENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFI 119
E I+E+ LI+IDE HM+ + +RG I+E +++K++ +++ IQI MSATIGNI+ +I
Sbjct: 205 EKSIEEVSLIIIDEIHMIFDKRRGQIIEKIINKIMSIERKIQIIGMSATIGNISIFEKWI 264
Query: 120 EGITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLV--- 176
+ TY RP K EY+ +V + L G G + +
Sbjct: 265 KAKTYQSTYRPIKIEEYIVCKGKVINK----------EGEIKRVLKGEGDIENIIEIMEE 314
Query: 177 --QGNLMVLIFCSSKIACSNLALRLQFDRFPGTKEYK-------KQEKEDLIEALKEEND 227
+ V+ FCS+K C + G K+ K +E+ + E +
Sbjct: 315 AKKERKGVICFCSTKKGCERKGKEI----VQGIKKRKIEEMNKEIEEERIEMIKEMERSK 370
Query: 228 GKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVI 287
+ ++ I YG+ YHH+ +T ER++IE+++ G + +I TSTLA GVNLPA RVI
Sbjct: 371 FGIEEEFQDMIKYGIVYHHSGITIEERQIIEKSFKKGIITLIIATSTLALGVNLPASRVI 430
Query: 288 IRDSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCK--TMQDFLRFSSMMNAGPEPI 345
+G+++++ Y+QM GRAGR G+ E GES + CK M + N E
Sbjct: 431 FDKPKIGKEYLTRVQYQQMSGRAGRFGIDEKGESYIFCKEGEMSVVKNLMKVTNENKEIE 490
Query: 346 SSHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLF-YQLKSPEDQQTFLETTLSEIVA 404
+ + ILE + + + +D++ I+ TL+ Y++K E + + + SE +
Sbjct: 491 IQEKEEIQEKEDILEGIYNGIIENKKDIEKWIEKTLYWYKIKEKEGAEEW-KKKYSEQMI 549
Query: 405 SLLASKG---TMLTMNEAGHLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNS- 460
+L G + + I +A V+ G+ + IY ++ L ++N
Sbjct: 550 EILKHDGMIEEIEEEGGEKRIKCNQIGRATVKGGMGINSSKEIYFNINEGYLKKNIINKD 609
Query: 461 LHMLFLVIPLEYRIPSDGILLSRSKVYD---RYTKFHPQTLRVAEALGVT-------ENL 510
++ L+L I EY I ++ D + K + + + +G++ E++
Sbjct: 610 VYYLYLGINNEYEINWSCFEKKVEEIEDIKNKNNKEYQDYQELMKTIGISPVFICYMESM 669
Query: 511 VALNVTGKLKDEKKALLCRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFA 570
+ +T ++ +K + +F++ ILY++++ N ++ GI LQ N T
Sbjct: 670 KKVKLTNEM-IKKIQIHKKFYYFIILYEMIHEKNILQIINEMGISRGVLQQLQNNTITTL 728
Query: 571 SKVYRFCEELP--ELWCYKQLLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYS 628
+ + +F EL +L Y +LL D + + ++ ++ + G+ AR+L+ G++
Sbjct: 729 NMIIQFSNELHNVDLSLYLKLLID---RIKFGVCNDIVNIIQIDGITKEIARKLIVFGFN 785
Query: 629 SLELIARADAKEMVAKIRHLP 649
+ IA A ++ + I HL
Sbjct: 786 DISKIAHASFLDIFSLIHHLS 806
>gi|242007943|ref|XP_002424774.1| DNA polymerase theta, putative [Pediculus humanus corporis]
gi|212508297|gb|EEB12036.1| DNA polymerase theta, putative [Pediculus humanus corporis]
Length = 1350
Score = 214 bits (546), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 194/706 (27%), Positives = 332/706 (47%), Gaps = 66/706 (9%)
Query: 19 YLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLN 78
++E Y G G P + + +CTIEK + +I L++E + +GL+++DE H+L
Sbjct: 142 HVEGYMG--GHSPSI--SFKQVHLAVCTIEKANAIINRLLEEQSLQNLGLVIVDELHLLG 197
Query: 79 EPQRGPILECVVSKVLYLKKS----IQIFAMSATIGNINALSTFIEGITYVENSRPTKHS 134
+P RG +LE +++K+ Y+ + IQI MSAT+ N+ +L+ ++ Y + RP
Sbjct: 198 DPYRGYLLELLLTKLKYISEKSDFKIQIVGMSATLPNLKSLADWLLADLYYTDFRPVPLK 257
Query: 135 EYVTVDKRVFQSFDGK-SLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACS 193
E + F K S +I L G + + G+ VLIFC +K+ C
Sbjct: 258 ETLKCGSFFFDKHLNKVSELKILEAELSDDAENVGQLCLETIANGH-SVLIFCPTKVWCE 316
Query: 194 NLALRL-------------QFDRFPGT---KEYKKQEKEDLIEALKEENDGKLSTNLEEC 237
NLA ++ + + PG K+ ++ ++IE LK G L T+L +
Sbjct: 317 NLADKIAMFFKKNGCHKSAEIEGTPGWILRKQLNLKKINEVIEHLKMCPVG-LDTDLHKT 375
Query: 238 ILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGRDF 297
+ YGVA+HHA LT ER +IE ++ G+L+++C TSTL++GVNLPA+RVIIR
Sbjct: 376 VSYGVAFHHAGLTLDERDIIEGSFRKGSLRVLCATSTLSSGVNLPARRVIIRSPMSFGGI 435
Query: 298 ISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMD----PPT 353
+ + Y+QM+GRAGR G+ GESI++ K + L ++M + +PI S + +
Sbjct: 436 MDILTYRQMIGRAGRMGVDSEGESILIAKPNEKTL-CQTLMCSTLKPIESCLGHGRLSAS 494
Query: 354 LVDLILEVVAANLCSSLEDVKTLIKHTLFYQLKSPEDQQT--------------FLETTL 399
L +LE++A+ + ++ E+V T F S D Q F+ TL
Sbjct: 495 LKRALLEIIASGIAATPEEVDKYASCT-FLAFSSKHDIQVRNRVMLFHKLNNKIFINETL 553
Query: 400 SEIVASLLA--SKGTMLTMNEAGHL-SLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFC 456
+ + S + + + + E G + + T + KA + + L D L ++ +L + F
Sbjct: 554 KDPIKSCIDFLEENEFIRLQENGTIFTPTPLGKACLASSLPPDEGLALFRELQRARRCFV 613
Query: 457 LLNSLHMLFLVIPLEYRIPSDGILLSRSKVYDRYTKFHPQTLRVAEALGVTENLVA---- 512
L LH+++ V P Y + + RV E +G+ E +
Sbjct: 614 LDTDLHIIYQVTP--YSVSEQWSKIDWLNALSILESIPSSMKRVGEMVGIEEAFLVRVAK 671
Query: 513 --LNVTGKLKDEKKALLCRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFA 570
+N K ++ RF+ + L D++N +VAK + LQ+ + +A
Sbjct: 672 GMINTNNVENRNKLSIHRRFYTSLALQDLVNEIPLSEVAKKFECNKGMLQSLQQSAATYA 731
Query: 571 SKVYRFCEELPELWCYKQLL-TDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSS 629
V F + L W +L+ + + L + L LM LP + RAR + NAG+++
Sbjct: 732 GMVTEFTKCLG--WNSVELIFSQFQERLQFGIQRELCELMRLPLLNAVRARVIYNAGFTN 789
Query: 630 LELIARADAKEMVAKIRHLPLRSARNLISAAKLHFITKMDKVEAMK 675
L +A A+ E+ + + ++ +I+ TK DK E K
Sbjct: 790 LISLANANVVELENALFSVAPFQSKKMIAGE-----TKFDKDERNK 830
>gi|402083576|gb|EJT78594.1| hypothetical protein GGTG_03693 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 933
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 179/640 (27%), Positives = 310/640 (48%), Gaps = 57/640 (8%)
Query: 42 IYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQ 101
I +CT+EK + L+ + I++ I+++G++V+DE HM+++ RG + E + +K+L L++ IQ
Sbjct: 260 IGVCTLEKANALVNTAIEDCSINKLGVVVLDELHMIDDDYRGYLFELLATKLLCLEQPIQ 319
Query: 102 IFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSFDG----KSLTEIYA 157
I MSAT+ N N LST++ G +Y + RP E++ D V+ + ++ ++I
Sbjct: 320 IVGMSATLANANLLSTWLGGHSYETHYRPVPIEEHLVCDGSVYPAATTSNMIRTASQIDG 379
Query: 158 DNLDYSLTGSGP-------------DAVLHLV--------QGNLMVLIFCSSKIACSNLA 196
++ S S P D VL+ V + VL+F S+ C + A
Sbjct: 380 EHRRPSQALSCPTRKIDASSHKELKDPVLNAVVALANETARSGYGVLVFSGSRAMCESDA 439
Query: 197 LRLQFDRFPGTKEYKK---QEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGE 253
+ L P E + + +L+ L++ N G L L + I YGVA+H LT+ E
Sbjct: 440 M-LISRTMPTLAEVDQVAMDRRRELLADLQDLNCG-LDPVLLQTIPYGVAFHR--LTSEE 495
Query: 254 RRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGRDFISLNMYKQMVGRAGRT 313
R L+ + Y G L++ T +LAAG+NLPA+RVI+ ++ +GR+ + +M +QM GRAGR
Sbjct: 496 RDLVAKGYDGGILKVCIATCSLAAGINLPARRVILHNARMGRELVGPSMLRQMRGRAGRK 555
Query: 314 GLQESGESIMLCKT--MQDFLRFSSMMNAG-PEPISSHM-DPPTLVDLILEVVAANLCSS 369
G E GE+ + C+ ++D L +M+A P SS M D + +LEV+A L +
Sbjct: 556 GKDEVGETYLCCRATDLEDVL---GLMHAELPHVRSSLMTDRQRIQRALLEVIAIKLAAG 612
Query: 370 LEDVKTLIKHTLFYQLKSPEDQQTFLETTLSEIVASLLASKGTMLTMNEAGHLSLTSIAK 429
+ I+ TL Q + +ET+L + K + M++ T + K
Sbjct: 613 RASLDDYIRKTLLAQTTDLTTIDSLVETSLENL------QKMGFIIMDDHSDFQATQLGK 666
Query: 430 AAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEYRIPSDGILLSRSKVYDR 489
A V + L + + ++ +L F + +H+L+ P+ Y +D ++ ++
Sbjct: 667 AIVASALDPEDGVFVHKELKKALKAFVMDGDMHILYTFTPV-YDFAAD---INWRVFWNE 722
Query: 490 YTKFHPQTLRVAEALGVTENLVA-LNVTGKLK---DEKKALL---CRFFHACILYDVLNF 542
LRV + LG+ V + G+L+ +E+K L RF+ A L D+ N
Sbjct: 723 MEALDESGLRVLKLLGLKPTEVTRMMQGGQLRESTEEEKELARVYRRFYVALQLRDLCNE 782
Query: 543 DNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELWCYKQLLTDLPQTLMYCRA 602
VA+ Y + +QN FA+ + +FC+ + + +L L
Sbjct: 783 VPVHVVARKYDVPRGAVQNLAQNCQGFAAGMVKFCQHM-DWGALSSVLDHFSDRLKAGAK 841
Query: 603 PNLRALMDLPGVKIGRARQLLNAGYSSLELIARADAKEMV 642
+L +L + VK AR + G+ ++ IA D KE+V
Sbjct: 842 ADLLSLAQITFVKSRTARVFWDNGFKTVVSIANTDPKELV 881
>gi|239609367|gb|EEQ86354.1| DNA-directed DNA polymerase theta [Ajellomyces dermatitidis ER-3]
Length = 917
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 186/691 (26%), Positives = 325/691 (47%), Gaps = 81/691 (11%)
Query: 33 TKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSK 92
T+ I +CTIEK + L+ + I+E +I+++G++V+DE HML++ RG ++E +V+K
Sbjct: 260 TRATWADTDIAVCTIEKANSLVNTAIEECKINDLGVVVLDELHMLDDEHRGYLIEIMVTK 319
Query: 93 VLYLKKSIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSFDGKSL 152
++ LK+ IQI MSAT+ N L+ ++ Y+ RP E++ + ++ + K
Sbjct: 320 LMLLKQDIQIVGMSATLSNTEVLAKWLRANYYISKYRPIPIREHLVYNNEIYPATSSKEF 379
Query: 153 --TEIYADNLDYS-----------------LTGSGPDAVLHLVQGNLM----VLIFCSSK 189
T + D S L S +A++ L + L+FC S+
Sbjct: 380 FRTATQLNKPDPSQRNSLACRIIDRSTYKELATSTANAMVSLALETALSGYGALVFCGSR 439
Query: 190 IACSNLALRLQFDRFPGTKEYKK---QEKEDLIEALKEENDGKLSTNLEECILYGVAYHH 246
AC + A+ L P K + + DLI L+ G + ++ ++ GVA+HH
Sbjct: 440 QACQSNAI-LISQAMPDETMLDKDLSERRMDLIAGLQSLPCG-IDPVFQKTVIKGVAFHH 497
Query: 247 ADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGRDFISLNMYKQM 306
A LT ER LI EAY G L+++ T +LAAG P ++I R QM
Sbjct: 498 AGLTTEERDLIAEAYDKGILRVLVATCSLAAG---PMAKLIRR---------------QM 539
Query: 307 VGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPT--LVDLILEVVAA 364
GRAGR G E GE+ +LC+ D + ++ A I+S + P + +LE +A
Sbjct: 540 RGRAGRKGKDEVGETYLLCQK-DDLEAVAELLEAEMPAIASGLTPEKRGIKRALLEAIAT 598
Query: 365 NLCSSLEDVKTLIKHTLFYQLKSPEDQQTFLETTLSEIVASLLASKGTMLTMNEAGHLSL 424
L SS E V + TL YQ ++ + +++TL E+V ++ + + +
Sbjct: 599 RLVSSRETVNEYVTCTLLYQNMETDELFSMVDSTLKELV------DHGLVDLKQDEYFEP 652
Query: 425 TSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEYRIPSDGILLSRS 484
T + +A V + LS + + I+ +L +F + +H+ ++ PL+ P+D + S
Sbjct: 653 TQLGQAVVSSSLSPEDGIFIHDELKRALKSFVMDGEMHIFYMFAPLQNSAPAD---IDWS 709
Query: 485 KVYDRYTKFHPQTLRVAEALGVTE---NLVALNVTGKLKDEKKALLCRFFH----ACILY 537
D+ +R + +GV N +A + T ++KDE L R +H A L
Sbjct: 710 IFRDQMNNLDESGIRALQLVGVEPAFVNKMAQSRT-RIKDET---LARIYHRAYTAFQLR 765
Query: 538 DVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELWCYKQLLTD-LPQT 596
D+ N +A+ Y I ++Q + FA+ + +FC+ + W ++ D +
Sbjct: 766 DLSNEVPISTIARKYNIPRGNVQTLTQICHGFAAGIVKFCQRMG--WDMLAVVLDHMRDR 823
Query: 597 LMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIARADAKE-----MVAKIRHLPLR 651
L +L + + VK AR L G+ +L +A AD K+ M+A+ R++ L+
Sbjct: 824 LQAGARADLLEMAQVAYVKSRTARLLWENGFKTLRALAEADPKDLLPVLMMAQPRNIDLQ 883
Query: 652 SARNLISAAKLHFITKMDKVEAMKNLIQNLQ 682
++ + +AKL +TK + + N I Q
Sbjct: 884 GSQRI--SAKL--LTKAEIIVGSANKIWESQ 910
>gi|307199388|gb|EFN80013.1| DNA polymerase theta [Harpegnathos saltator]
Length = 1937
Score = 213 bits (542), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 188/635 (29%), Positives = 308/635 (48%), Gaps = 62/635 (9%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V EK + +E + G G PP + I TIEK + L+ L++E
Sbjct: 59 VVREKMYYFQDLLSDSGIRVEGFMG--GMVPPGG--FAATQVAIATIEKANSLVNRLMEE 114
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYL-----KKSIQIFAMSATIGNINAL 115
N + +G +VIDE H+L + RG +LE +++K+ Y+ +IQ+ MSAT+ N++ L
Sbjct: 115 NDLSSLGAVVIDELHLLGDANRGYLLELLLTKLKYMTIRNDDINIQLIGMSATLPNLSLL 174
Query: 116 STFIEGITYVENSRPTKHSEYVTVDKRVFQSFDGKS--------LTEIYADNLDYSLTGS 167
+ +++ Y RP +EY + V+ D K + E+ AD
Sbjct: 175 AKWLDAELYKTEFRPIPLNEYCKIGTHVY---DNKFRLVRKLAIVPELEAD--------- 222
Query: 168 GPDAVLHL----VQGNLMVLIFCSSKIACSNLALRLQFDRF---PGTKEY----KKQEKE 216
D +L L + VLIFC +K C LA ++ F G + KK+
Sbjct: 223 -ADNILQLCIETISAGHSVLIFCPTKKWCEKLAQQVAVAFFKLGSGNSTFGGILKKEINP 281
Query: 217 DLI----EALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCT 272
+LI E LK G L L+ I +G+A+HHA LT ER +IE ++ G+L+++ T
Sbjct: 282 ELIHETLEQLKRSPSG-LDNILKSTISFGIAFHHAGLTMDERDIIEGSFRTGSLRVLVAT 340
Query: 273 STLAAGVNLPAQRVIIRDSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFL 332
STL++GVNLPA+RVIIR G + ++ YKQM+GRAGR G +GESI++CK +
Sbjct: 341 STLSSGVNLPARRVIIRSPMFGPNLLNTLTYKQMIGRAGRMGKDSAGESILICKPTERNA 400
Query: 333 RFSSMMNAGPEPISSHMDPPT-LVDLILEVVAANLCSSLEDVKTLIKHTLFYQLKSPEDQ 391
S+++A +PI S ++ T L+ +LE VA+ + + ED++ I TL +
Sbjct: 401 AV-SLLSAILDPIESCLNDSTLLIRALLEAVASEVLYTSEDLELYINCTLLSL-----SE 454
Query: 392 QTFLETTLSEIVASLLASKGTML-TMNEAGHLSLTSIAKAAVQAGLSHDVCLIIYSDLLH 450
Q+ ++T SE + LL ++ +L T + TS+ KA + A + L ++ +L
Sbjct: 455 QSNVQTFSSEAIKFLLDNEFLLLQTTEKETRWIATSLGKACLAASVPPREGLFLFEELQK 514
Query: 451 NKLNFCLLNSLHMLFLVIPLEYRIPSDGILLSRSKVYDRYTKFHPQTLRVAEALGVTENL 510
+ F L LH+++LV PL S + ++ + RV +GV E
Sbjct: 515 ARRCFVLDTELHVIYLVTPLGS--GSQIETVDWMTFHELWNIMSESERRVGRLVGVEERF 572
Query: 511 VALNVTGKLKDEKK-ALLCRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYF 569
+ + G ++ K + RF+ A L++++N V K YG LQ + +
Sbjct: 573 LLSAIRGIIRPGKSLNIHKRFYSALALHELVNEVPLNIVCKKYGCCRGVLQTLQQSAATY 632
Query: 570 ASKVYRFCEELPELW-CYKQLLTDLPQTLMY--CR 601
A V +FC++L W C + L++ L + CR
Sbjct: 633 AGMVTQFCKQLR--WDCMELLISQFQTRLQFGVCR 665
>gi|449708550|gb|EMD47993.1| DNA double strand break repair Rad50 ATPase, putative [Entamoeba
histolytica KU27]
Length = 848
Score = 213 bits (541), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 181/681 (26%), Positives = 324/681 (47%), Gaps = 61/681 (8%)
Query: 6 YQSLAKAAEEFKFYLEEY-----AGVKGQYPPTKRQLNKK-SIYICTIEKGSKLIGSLIQ 59
Y S+A+ EE Y +E +KG + R ++K+ I ICTIEKG+ LI LI+
Sbjct: 150 YVSMAQEKEE---YFQEILKSIKINIKGYFQN--RGIDKEFDIGICTIEKGNGLINKLIE 204
Query: 60 ENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFI 119
E I+E+ LI+IDE HM+ + +RG I+E +++K++ +++ IQI MSATIGNI+ +I
Sbjct: 205 EKSIEEVSLIIIDEIHMIFDKRRGQIIEKIINKIMSIERKIQIIGMSATIGNISIFEKWI 264
Query: 120 EGITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLV--- 176
+ TY RP K EY+ +V + L G G + +
Sbjct: 265 KAKTYQSTYRPIKIEEYIVCKGKVINK----------EGEIKRVLKGEGDIENIIEIMEE 314
Query: 177 --QGNLMVLIFCSSKIACSNLALRLQFDRFPGTKEYK-------KQEKEDLIEALKEEND 227
+ V+ FCS+K C + G K+ K +E+ + E +
Sbjct: 315 AKKERKGVICFCSTKKGCERKGKEI----VQGIKKRKIEEMNKEIEEERIEMIKEMERSK 370
Query: 228 GKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVI 287
+ ++ I YG+ YHH+ +T ER++IE+++ G + +I TSTLA GVNLPA RVI
Sbjct: 371 FGIEEEFQDMIKYGIVYHHSGITIEERQIIEKSFKKGIITLIIATSTLALGVNLPASRVI 430
Query: 288 IRDSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCK--TMQDFLRFSSMMNAGPEPI 345
+G+++++ Y+QM GRAGR G+ E GES + CK M + N E
Sbjct: 431 FDKPKIGKEYLTRVQYQQMSGRAGRFGIDEKGESYIFCKEGEMSVVKNLMKVTNENKEIE 490
Query: 346 SSHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLF-YQLKSPEDQQTFLETTLSEIVA 404
+ + ILE + + + +D++ I+ TL+ Y++K E + + + SE +
Sbjct: 491 IQEKEEIQEKEDILEGIYNGIIENKKDIEKWIEKTLYWYKIKEKEGAEEW-KKKYSEQMI 549
Query: 405 SLLASKG---TMLTMNEAGHLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNS- 460
+L G + + I +A V+ G+ + IY ++ L ++N
Sbjct: 550 EILKHDGMIEEIEEEGGEKRIKCNQIGRATVKGGMGINSSKEIYFNINEGYLKKNIINKD 609
Query: 461 LHMLFLVIPLEYRIPSDGILLSRSKVYD---RYTKFHPQTLRVAEALGVT-------ENL 510
++ L+L I EY I ++ D + K + + + +G++ E++
Sbjct: 610 VYYLYLGINNEYEINWSCFEKKVEEIEDIKNKNNKEYQDYQELMKTIGISPVFICYMESM 669
Query: 511 VALNVTGKLKDEKKALLCRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFA 570
+ +T ++ +K + +F++ ILY++++ N ++ GI LQ N T
Sbjct: 670 KKVKLTNEM-IKKIQIHKKFYYFIILYEMIHEKNILQIINEMGISRGVLQQLQNNTITTL 728
Query: 571 SKVYRFCEELP--ELWCYKQLLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYS 628
+ + +F EL +L + +LL D + + ++ ++ + G+ AR+L+ G++
Sbjct: 729 NMIIQFSNELHNVDLSLHLKLLID---RIKFGVCNDIVNIIQIDGITKEIARKLIVFGFN 785
Query: 629 SLELIARADAKEMVAKIRHLP 649
+ IA A ++ + I HL
Sbjct: 786 DISKIAHASFLDIFSLIHHLS 806
>gi|312377443|gb|EFR24272.1| hypothetical protein AND_11228 [Anopheles darlingi]
Length = 2035
Score = 212 bits (539), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 189/683 (27%), Positives = 304/683 (44%), Gaps = 60/683 (8%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+ EK L + + +E + G G +PP + +CTIEK + +I L+++
Sbjct: 510 VAREKTHYLQQLLGPGGWRVEGFYG--GSHPPGG--FESVDLAVCTIEKANSIINRLLEQ 565
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKK----SIQIFAMSATIGNINALS 116
+ + +GL+V+DE H++ +P RG ILE +++KV ++ + +IQI MSAT+ N+ L+
Sbjct: 566 SNLTTLGLVVVDEVHLIADPSRGYILELLLTKVRFVAQQANATIQIVCMSATLPNVELLA 625
Query: 117 TFIEGITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTG----SGPDAV 172
+++ Y + RP + E + + V+ G + LD +L G P+ V
Sbjct: 626 RWLDADHYHTDYRPIELIEMMKIGNTVY-GAAGAADQVAAIRRLDGTLLGCPITKDPEHV 684
Query: 173 LHLVQGNLM----VLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDG 228
L L+ V++FC SK C L+L L KE + L E L E+ DG
Sbjct: 685 TQLTLETLLEGCSVIVFCPSKDWCEQLSLTLASTLHTLKKEDPASTHQALRERLNEQLDG 744
Query: 229 K---------------LSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTS 273
L L + I YG+A+HHA LT ER ++E ++ G L++I TS
Sbjct: 745 TKQEEVLLQLRNCPAGLDAVLGKTIRYGIAFHHAGLTTDERDIVEGSFRDGALRVIVATS 804
Query: 274 TLAAGVNLPAQRVIIRDSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLR 333
TL++GVNLPA+RVI+R G I+ Y+QM+GRAGR G GES+++C ++ +
Sbjct: 805 TLSSGVNLPARRVIVRTPKFGGRPINALTYRQMIGRAGRKGRDTLGESVLICTPAEEKIG 864
Query: 334 FSSMMNAGPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLF----------- 382
+ P+ S +D + V A L S + + L
Sbjct: 865 RELLGANELPPLRSCLDADN-----YDFVNATLYSCDRSYRFSVGEQLLATVTTTKTTTT 919
Query: 383 YQLKSPEDQQTFLETTLSEIVASLLA-----SKGTMLTMNEAGHLSLTSIAKAAVQAGLS 437
++ + T + V S LA + E L+ T + A + A L
Sbjct: 920 TTTGKETKNESTHKATRDDPVVSCLAFLLEYEFIRLQETEERTVLAATRLGHACLAASLP 979
Query: 438 HDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEYRIPSDGILLSRSKVYDRYTKFHPQT 497
+++S+L + F L + LH ++LV P Y + + D + +
Sbjct: 980 PKDGFLLFSELQRARQCFVLESELHAVYLVTP--YSVAYQWQQIGWMDFLDLWERLPASA 1037
Query: 498 LRVAEALGVTENLV--ALNVTGKLKDEKKALLCRFFHACILYDVLNFDNHQKVAKMYGIQ 555
RV E +GV E+ + A+ TG L + RF+ A L D++N VAK +
Sbjct: 1038 RRVGELVGVRESFMVRAMRGTGVLDQRALQIHKRFYTALALLDLVNEVPLCTVAKRFRCC 1097
Query: 556 NSHLQNFLNVTSYFASKVYRFCEELPELWCYKQLL-TDLPQTLMYCRAPNLRALMDLPGV 614
LQ+ + FA V FC L W L+ + L + A L LM + +
Sbjct: 1098 RGLLQSLQQTAATFAGIVASFCASLN--WTLLHLIVVQFRERLFFGVAHELLDLMRIASL 1155
Query: 615 KIGRARQLLNAGYSSLELIARAD 637
RAR L +AG+ L +A AD
Sbjct: 1156 NGQRARLLYDAGFQGLLQLANAD 1178
>gi|297285105|ref|XP_001111254.2| PREDICTED: DNA polymerase theta isoform 2 [Macaca mulatta]
Length = 2672
Score = 212 bits (539), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 174/634 (27%), Positives = 298/634 (47%), Gaps = 99/634 (15%)
Query: 13 AEEFKFYLE---EYAGVK-----GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRID 64
A+E K+YL+ + G+K G P+ R + I +CTIE+ + LI LI+EN++D
Sbjct: 289 AKEKKYYLQSLFQEVGIKVDGYMGSTSPS-RHFSSLDIAVCTIERANGLINRLIEENKMD 347
Query: 65 EIGLIVIDEFHMLNEPQRGPILECVVSKVLY---------------LKKSIQIFAMSATI 109
+G++V+DE HML + RG +LE +++K+ Y L ++QI MSAT+
Sbjct: 348 LLGMVVVDELHMLGDSHRGYLLELLLTKICYITRKSASCQADLASSLSNAVQIVGMSATL 407
Query: 110 GNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSF-----DGKSLTEIYADNLDYSL 164
N+ +++++ Y + RP E V V ++ S + + + ++ D
Sbjct: 408 PNLELVASWLNAEHYHTDFRPVPLLESVKVGNSIYDSSMKLVREFEPMLQVKGDE----- 462
Query: 165 TGSGPDAVLHL----VQGNLMVLIFCSSKIACSNLALRLQFDRF-------------PGT 207
D V+ L ++ N VL+FC SK C LA + + + P
Sbjct: 463 -----DHVVSLCYETIRDNHSVLLFCPSKAWCEKLADIIAREFYNLHHQTEGEGLVKPSE 517
Query: 208 KEYKKQEKEDLIEALKEEN--DGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGT 265
E+++L+E + + L + L++ + +GVA+HHA LT ER +IE A+ G
Sbjct: 518 CPPVNLEQKELLEVMDQLRRLPSGLDSVLQKTVSWGVAFHHAGLTLEERDIIEGAFRQGL 577
Query: 266 LQIICCTSTLAAGVNLPAQRVIIRDSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLC 325
++++ TSTL++GVNLPA+RVIIR G + + YKQM GRAGR G+ G +I++C
Sbjct: 578 IRVLAATSTLSSGVNLPARRVIIRTPIFGGRPLDILTYKQMAGRAGRKGVDTVG-NILIC 636
Query: 326 KTMQDFLRFSSMMNAGPEPISSHMD-------PPTLVDLILEVVAANLCSSLEDVKTLIK 378
K + + +++ +P+ S + +++ ILE++ + S+ +D+ T
Sbjct: 637 KNSEKS-KGIALLQGSLKPVRSCLQRREGEEVTASMIRAILEIIVGGVASTSQDMHTYAA 695
Query: 379 HTLFYQLKSPEDQQTFLETTLS----------------EIVASLLASKGTMLTMNEAGHL 422
T F E +Q S E + S AS GT + HL
Sbjct: 696 CT-FLAASMKEGKQGIQRNQESVQLGAIEACVMWLLENEFIQSTEASDGTEGKVYHPTHL 754
Query: 423 SLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEYRIPSDGILLS 482
A + + LS L I++DL F L N LH+L+LV P+ D +
Sbjct: 755 -----GSATLSSSLSPADTLDIFADLQRAMKGFVLENDLHILYLVTPMF----EDWTTID 805
Query: 483 RSKVYDRYTKFHPQTLRVAEALGVTENLVALNVTGKL------KDEKKALLCRFFHACIL 536
+ + + K RVAE +GV E +A V GK+ + + A+ RFF + +L
Sbjct: 806 WYRFFCLWEKLPTSMKRVAELVGVEEGFLARCVKGKVVTRTERQHRQMAIHKRFFTSLVL 865
Query: 537 YDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFA 570
D+++ +++ + YG +Q+ + +A
Sbjct: 866 LDLISEVPLREINQKYGCNRGQIQSLQQSAAVYA 899
>gi|407044700|gb|EKE42769.1| DEAD/DEAH box helicase domain containing protein [Entamoeba
nuttalli P19]
Length = 848
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 177/677 (26%), Positives = 332/677 (49%), Gaps = 53/677 (7%)
Query: 6 YQSLAKAAEEF--KFYLEEYAGVKGQYPPTKRQLNKK-SIYICTIEKGSKLIGSLIQENR 62
Y S+A+ EE+ + + +KG + R ++K+ I ICTIEKG+ +I LI+E
Sbjct: 150 YVSMAQEKEEYFQEIFKSIKINIKGYFQN--RVIDKEFDIGICTIEKGNGIINKLIEEKS 207
Query: 63 IDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGI 122
I+E+ LI+IDE HM+ + +RG I+E +++K+ +++ IQI MSATIGNI+ +I+
Sbjct: 208 IEEVSLIIIDEIHMIFDKRRGQIIEKIINKITSIERKIQIIGMSATIGNISIFEKWIKAK 267
Query: 123 TYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGP-DAVLHLVQ---- 177
TY RP K EY+ +V + + G G + ++ +++
Sbjct: 268 TYQSTYRPIKIEEYIVCKGKVINK----------EGEIKRVIKGEGDIENIISIMEEAKK 317
Query: 178 GNLMVLIFCSSKIACSNLALRL-QFDRFPGTKEYKKQEKEDLIEALKEENDGK--LSTNL 234
V+ FCS+K C + + + + +E K+ +E IE +KE K +
Sbjct: 318 ERKGVICFCSTKKGCERMGKEIVKILKKRRKEEMNKEIEEQRIEMIKEMERSKFGIEEEF 377
Query: 235 EECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVG 294
++ I YG+ YHH+ +T ER++IE+++ G + +I TSTLA GVNLPA RVI +G
Sbjct: 378 QDMIRYGIVYHHSGITNEERQIIEKSFKKGIITLIIATSTLALGVNLPASRVIFDKPKIG 437
Query: 295 RDFISLNMYKQMVGRAGRTGLQESGESIMLCK-----TMQDFLRFSSMMNAGPEPISSHM 349
+++++ Y+QM GRAGR G+ E GES + CK +++ ++ ++
Sbjct: 438 KEYLTNVQYQQMSGRAGRFGIDEKGESYIFCKEGEISIVKNLMKVTNENKE---IEIEEK 494
Query: 350 DPPTLVDLILEVVAANLCSSLEDVKTLIKHTLF-YQLKSPEDQQTFLETTLSEIVASLLA 408
+ + ILE + + + +D++ I+ TL+ Y +K E + + + SE + +L
Sbjct: 495 EEIQEKEDILEGIYNGIIENKKDIEKWIEKTLYWYTIKEKEGAEEW-KKKYSEKMIEILK 553
Query: 409 SKGTMLTMNEAGHLSL---TSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLN-SLHML 464
G + + E G I +A V+ G+ IY ++ L ++N ++ L
Sbjct: 554 HDGMIEEIEEEGGEKKIKCNQIGRATVKGGMGIKFSKEIYFNINEGYLKNNIINKDVYYL 613
Query: 465 FLVIPLEYRIPSDGILLSRSKVYD---RYTKFHPQTLRVAEALGVT-------ENLVALN 514
+L I EY I + + D + K + + +++G+ E++ +
Sbjct: 614 YLGINNEYEINWNCFEKKVEDIEDIKNKNNKEYQDCQELMKSIGINPVFICYMESMKKVK 673
Query: 515 VTGKLKDEKKALLCRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVY 574
+T + K + ++++ ILY++++ N ++ GI LQ N T + +
Sbjct: 674 LTNDIIK-KIEIHKKYYYFIILYEIIHEKNIIQIINEMGISRGVLQQLQNNTITTLNMII 732
Query: 575 RFCEELP--ELWCYKQLLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLEL 632
+F EL +L + ++L D + + ++ ++ + G+ AR+L+ G++ +
Sbjct: 733 QFSNELHNFDLSFHLKVLID---RIKFGVCSDIVHIIQIDGITKEIARKLIVFGFNDISK 789
Query: 633 IARADAKEMVAKIRHLP 649
IA A ++ + I HL
Sbjct: 790 IAHASFLDIFSLIHHLS 806
>gi|241747887|ref|XP_002405662.1| DNA polymerase theta, putative [Ixodes scapularis]
gi|215505916|gb|EEC15410.1| DNA polymerase theta, putative [Ixodes scapularis]
Length = 704
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 193/639 (30%), Positives = 300/639 (46%), Gaps = 69/639 (10%)
Query: 29 QYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILEC 88
Q PP L + +CTIEK + L+ ++QE + ++G +V+DE H++ +P RG +LE
Sbjct: 99 QRPPGG--LASLDVAVCTIEKANGLVNRMLQEGTLAQLGTVVVDEVHLVGDPNRGYLLEL 156
Query: 89 VVSKVLYLKKS-IQIFAMSATIGNINALSTFIEGITYVENSRPT------KHSEYVTVDK 141
+++K+ Y+ +S +Q+ AMSA +GN+ AL+ +++ Y RP K + V + K
Sbjct: 157 MLAKLAYMARSGVQVVAMSACLGNLEALARWLDAELYRCTERPVPLRQLFKETVSVFLHK 216
Query: 142 RVFQSFDGKSLTEIYADNLDYSLTGSGP------DAVLHL-----VQGNLMVLIFCSSKI 190
V ++ L E L + G GP + +L L ++G+ VL+FC ++
Sbjct: 217 EVVGQYNADELWEGPPLRL---VKGPGPPLPEDPEGLLQLCLETWLEGH-AVLLFCPTRA 272
Query: 191 ACSNLALRLQFDRFPGTKE-YKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADL 249
C LAL L + + +L + L G L L C+ VA+HHA L
Sbjct: 273 WCEALALALARGARLLLARLHSGLQLAELGQQLAATPAG-LDPALGRCLRCAVAFHHAGL 331
Query: 250 TAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGRDFISLNMYKQMVGR 309
T ER +IEEA+ G L+ + TSTL++GVNLPA+RV+IR + + Y+QM GR
Sbjct: 332 TTDERDVIEEAFRRGVLRALVATSTLSSGVNLPARRVVIRTPMFHGAPLDVMAYRQMAGR 391
Query: 310 AGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHM-----DPPTLVDLILEV--V 362
AGR G+ GES+++CKT + L + A P PI S + P L +LEV
Sbjct: 392 AGRLGMDTHGESVLVCKTSERGL-AERLCGAEPPPIGSSLAGRGAATPALKRALLEVSQT 450
Query: 363 AANLCSSLEDVKTLIKHTLFYQLKSPEDQQTFLETTLSEIVASLLASKGTMLTMNEAGHL 422
A + S L ++ L + L P F + V L+A G L
Sbjct: 451 AVKVGSRLWVIRV---GCLLFDL--PHILALFFKC-----VWDLVADGGEGGPCYHPTQL 500
Query: 423 SLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEYRIPSDGILLS 482
L +A + LS D L + +DL + L N LH+++LV P+ L S
Sbjct: 501 GLAVLASS-----LSPDEALCVLADLEQARRCLVLENELHLVYLVTPVH--------LSS 547
Query: 483 RSKVYDRYTKFH----PQTLRVAEALGVTENLVALNVTGKLKDEKKALLCRFFHACILYD 538
+ + RY P RVA+ GVTE +A G+ + R A L +
Sbjct: 548 QVVDWGRYQALWEGLSPDRQRVAQQAGVTEASLAARGRGREASHR-----RLLVALALEE 602
Query: 539 VLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELW-CYKQLLTDLPQTL 597
+L +VA YG+ LQ+ + + FA V FCE+L W + L++ L L
Sbjct: 603 LLGERPLAQVAPRYGLPKGLLQSLQHGAATFAGMVCAFCEQLG--WHGLRLLVSQLQSRL 660
Query: 598 MYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIARA 636
+ P L L+ LP + AR L + G++ +A+A
Sbjct: 661 HFGVRPELVELLRLPCLDGPCARLLHDCGFTEPRCLAQA 699
>gi|336464070|gb|EGO52310.1| hypothetical protein NEUTE1DRAFT_90455 [Neurospora tetrasperma FGSC
2508]
Length = 902
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 182/657 (27%), Positives = 302/657 (45%), Gaps = 63/657 (9%)
Query: 42 IYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQ 101
+ +CT+EK + LI + I + I ++ +V+DE HM+++ RG +LE + +K+L L + +Q
Sbjct: 201 VAVCTMEKANSLINAAITDCSISKLRAVVLDECHMIDDGYRGYLLELMTTKLLCLDQQVQ 260
Query: 102 IFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLD 161
I AMSAT+ NI L ++ G +Y + RP E++ D +++ + SL + A LD
Sbjct: 261 IIAMSATLTNIRLLKDWLGGHSYETHYRPVPIEEHLVYDGKIYPATTTASLLKT-ATQLD 319
Query: 162 Y----------------------------SLTGSGPDAVLHLV--------QGNLMVLIF 185
SL D VL+ V + VL+F
Sbjct: 320 TRNATTTTTTQGPPPSTTSSLQHIRFIHPSLHREFKDPVLNAVVALANETARAGYGVLVF 379
Query: 186 CSSKIACSNLALRLQ--FDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVA 243
SS+ C + A+ + F ++ + DL+ L+ + G L LE+ I GVA
Sbjct: 380 SSSRAGCESDAVLISRVLPSFQEADPLIRERRLDLLNDLRSSSTG-LDCKLEQTIPCGVA 438
Query: 244 YHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGRDFISLNMY 303
+HHA LT ER LI AY AGTL++ T++LAAG+NLPA+RVI+ + +G D + M
Sbjct: 439 FHHAGLTTEERELIANAYDAGTLKVCVATASLAAGINLPARRVILHGARMGIDLVGPAML 498
Query: 304 KQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHM--DPPTLVDLILEV 361
+QM GRAGR G E GE+ + C+ D +M+A I+S + D + +LEV
Sbjct: 499 RQMRGRAGRKGKDEVGETYLCCRR-NDLEAVVDLMHADLPQIASCLVSDERRIRRALLEV 557
Query: 362 VAANLCSSLEDVKTLIKHTLFY--------QLKSPEDQ-QTFLETTLSEIVASLLASKGT 412
+A L +S E + + T+ + + EDQ + ++E L ++ + T
Sbjct: 558 IAIKLATSREALDEYVGRTMLACEQRLAEKETEEWEDQIRGYIEIGLEKLKEMGFITV-T 616
Query: 413 MLTMNEAGHLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEY 472
+ E S T + A V + L + + I+ +L F + +H+L+ P+
Sbjct: 617 VDERFETASYSTTKLGGAIVASSLDPEDGVFIHKELERALKGFVMDGEMHVLYNFTPVSG 676
Query: 473 RIPSDGILLSRSKVYDRYTKFHPQTLRVAEALG----VTENLVALNVTGKLKDEKKALL- 527
+G ++ ++ K LRV LG V ++ + + DE+K
Sbjct: 677 L--GNGTSINWKVFWNEMEKLDESGLRVMSFLGLKPVVLNRMLHGGILKETTDEEKDTAR 734
Query: 528 --CRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELWC 585
RF+ A L D+ N +VA+ Y + +Q FA+ + +FCE +
Sbjct: 735 RYYRFYLALQLRDLCNEVPIHRVAQKYDVPRGTVQTLAQTCQGFAAGMIKFCEAMGWG-A 793
Query: 586 YKQLLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIARADAKEMV 642
L L +L +L + VK AR + G+ ++ +IA AD KE+V
Sbjct: 794 MAAALDHFADRLKAGARADLLSLSKITFVKSRTARVFWDNGFKTVAVIANADPKELV 850
>gi|89267985|emb|CAJ81454.1| polymerase (DNA directed), theta [Xenopus (Silurana) tropicalis]
Length = 861
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 169/596 (28%), Positives = 284/596 (47%), Gaps = 80/596 (13%)
Query: 13 AEEFKFYLE---EYAGVK-----GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRID 64
A+E FYL+ + GVK G P + +CTIEK + L+ LI+EN+ID
Sbjct: 271 AKEKTFYLQNLFQEVGVKVDGYMGSSSPAG-GFCSLDVAVCTIEKANGLVNRLIEENKID 329
Query: 65 EIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKK---------------SIQIFAMSATI 109
+G++V+DE HML + RG +LE +++KV Y+ + +QI MSAT+
Sbjct: 330 LLGMMVVDELHMLGDSHRGYLLELLLTKVRYVTQKGAVGRKAEGAGPANDVQIVGMSATL 389
Query: 110 GNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQS-----FDGKSLTEIYADNLDYSL 164
N+ L+ +++ Y + RP E V + + V+ S + + L + D+ D+ +
Sbjct: 390 PNLGLLAAWLDAELYHTDFRPVPLLERVKIGRTVYDSNMVAVREFEPLLPVKGDD-DHIV 448
Query: 165 TGSGPDAVLHLVQGNLMVLIFCSSKIACSNLA--LRLQF----------------DRFPG 206
+ S V G +LIFC SK C LA + +F D F
Sbjct: 449 SLS-----YETVWGGHSILIFCPSKNWCEKLADTIAREFYNLFHRAQQRGDAGGSDSFVP 503
Query: 207 TKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTL 266
+ D+++ LK G L L + +GVA+HHA LT ER ++E A+ G +
Sbjct: 504 PVALDRDGIRDVMDQLKRSPAG-LDAVLGRTVPWGVAFHHAGLTFDERDIVEGAFRQGFV 562
Query: 267 QIICCTSTLAAGVNLPAQRVIIRDSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCK 326
+++ TSTL++GVNLPA+RVIIR + + YKQM GRAGR G+ GESI++CK
Sbjct: 563 RVLAATSTLSSGVNLPARRVIIRSPLFNGRLLDILTYKQMAGRAGRKGVDTEGESILVCK 622
Query: 327 TMQDFLRFSSMMNAGPEPISSHM-------DPPTLVDLILEVVAANLCSSLEDVKTLIKH 379
+ + S++ +P+ S + +++ ILE++ + + EDV+
Sbjct: 623 NPER-AKGISLLQGSLKPVQSCLLRKEGAGVTGSMIRAILEIIVGGVADTPEDVRIYASC 681
Query: 380 TLF---YQLKSPEDQQTFLETTLSEIVASLLASKGTMLTMNEAGHLSL-----TSIAKAA 431
TL + + ++ + V LL ++ + + G T + A
Sbjct: 682 TLLAASMKQGGGDQEEEHGGGAIEACVDWLLRNEFIQILEEDRGGTKAEVYRPTKLGAAT 741
Query: 432 VQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEYRIPSDGILLSRSKVYDRYT 491
+ + LS L I++DL F L N LH+L+LV P + + + + + +
Sbjct: 742 LSSSLSPSEALGIFADLQRAMKGFVLENDLHILYLVTP----VYEEWTTIDWYQFFCLWE 797
Query: 492 KFHPQTLRVAEALGVTENLVALNVTGKL--KDEKK----ALLCRFFHACILYDVLN 541
K RVAE +G+ E +A +V GK+ K++++ A+ RFF + +L D+++
Sbjct: 798 KLPTSMKRVAELVGIEEGFLARSVNGKIVAKNDRQHRQIAIHRRFFTSLVLLDLIS 853
>gi|402859187|ref|XP_003894049.1| PREDICTED: DNA polymerase theta [Papio anubis]
Length = 2575
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 168/575 (29%), Positives = 273/575 (47%), Gaps = 90/575 (15%)
Query: 13 AEEFKFYLE---EYAGVK-----GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRID 64
A+E K+YL+ + G+K G P+ R + I +CTIE+ + LI LI+EN++D
Sbjct: 156 AKEKKYYLQSLFQEVGIKVDGYMGSTSPS-RHFSSLDIAVCTIERANGLINRLIEENKMD 214
Query: 65 EIGLIVIDEFHMLNEPQRGPILECVVSKVLY---------------LKKSIQIFAMSATI 109
+G++V+DE HML + RG +LE +++K+ Y L ++QI MSAT+
Sbjct: 215 LLGMVVVDELHMLGDSHRGYLLELLLTKICYITRKSASCQAHLASSLSNAVQIVGMSATL 274
Query: 110 GNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSF-----DGKSLTEIYADNLDYSL 164
N+ +++++ Y + RP E V V ++ S + + + ++ D
Sbjct: 275 PNLELVASWLNAEHYHTDFRPVPLLESVKVGNSIYDSSMKLVREFEPMLQVKGDE----- 329
Query: 165 TGSGPDAVLHL----VQGNLMVLIFCSSKIACSNLA---------LRLQFDRF--PGTKE 209
D V+ L ++ N VL+FC SK C LA L Q + P
Sbjct: 330 -----DHVVSLCYETIRDNHSVLLFCPSKTWCEKLADIIAREFYNLHHQTEGLVKPSECP 384
Query: 210 YKKQEKEDLIEALKEEN--DGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQ 267
E+++L+E + + L + L++ + +GVA+HHA LT ER +IE A+ G ++
Sbjct: 385 PVNLEQKELLEVMDQLRRLPSGLDSVLQKTVPWGVAFHHAGLTLEERDIIEGAFRQGLIR 444
Query: 268 IICCTSTLAAGVNLPAQRVIIRDSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKT 327
++ TSTL++GVNLPA+RVIIR G + + YKQM GRAGR G+ GESI++CK
Sbjct: 445 VLAATSTLSSGVNLPARRVIIRTPIFGGRPLDILTYKQMAGRAGRKGVDTVGESILICKN 504
Query: 328 MQDFLRFSSMMNAGPEPISSHMD-------PPTLVDLILEVVAANLCSSLEDVKTLIKHT 380
+ + +++ +P+ S + +++ ILE++ + S+ +D+ T T
Sbjct: 505 SEKS-KGIALLQGSLKPVRSCLQRREGEEVTASMIRAILEIIVGGVASTSQDMHTYAACT 563
Query: 381 LFYQLKSPEDQQTFLETTLS----------------EIVASLLASKGTMLTMNEAGHLSL 424
F E +Q S E + S AS GT + HL
Sbjct: 564 -FLAASMKEGKQGIQRNQESVQLGAIEACVMWLLENEFIQSTEASDGTEGKVYHPTHL-- 620
Query: 425 TSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEYRIPSDGILLSRS 484
A + + LS L I++DL F L N LH+L+LV P+ D +
Sbjct: 621 ---GSATLSSSLSPADTLDIFADLQRAMKGFVLENDLHILYLVTPMF----EDWTTIDWY 673
Query: 485 KVYDRYTKFHPQTLRVAEALGVTENLVALNVTGKL 519
+ + + K RVAE +GV E +A V GK+
Sbjct: 674 RFFCLWEKLPTSMKRVAELVGVEEGFLARCVKGKV 708
>gi|164424270|ref|XP_958186.2| hypothetical protein NCU07411 [Neurospora crassa OR74A]
gi|157070445|gb|EAA28950.2| hypothetical protein NCU07411 [Neurospora crassa OR74A]
Length = 907
Score = 210 bits (534), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 183/662 (27%), Positives = 303/662 (45%), Gaps = 68/662 (10%)
Query: 42 IYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQ 101
+ +CT+EK + LI + I + I ++ +V+DE HM+++ RG +LE + +K+L L + +Q
Sbjct: 201 VAVCTMEKANSLINAAITDCSISKLRAVVLDECHMIDDGYRGYLLELMTTKLLCLDQQVQ 260
Query: 102 IFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLD 161
I AMSAT+ NI L ++ G +Y + RP E++ D +++ + SL + A LD
Sbjct: 261 IIAMSATLTNIRLLKDWLGGHSYETHYRPVPIEEHLVYDGKIYPATTTASLLKT-ASQLD 319
Query: 162 ----------YSLTGSGP-----------------------DAVLHLV--------QGNL 180
+ T GP D VL+ V +
Sbjct: 320 TRNATTTTTTTTTTTQGPPPSTTSSLQHIRFIHPSLHREFKDPVLNAVVALANETARAGY 379
Query: 181 MVLIFCSSKIACSNLALRLQ--FDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECI 238
VL+F SS+ C + A+ + F ++ + DL+ L+ + G L LE+ I
Sbjct: 380 GVLVFSSSRAGCESDAVLISRVLPSFQEADPLIRERRLDLLNDLRSSSTG-LDPKLEQTI 438
Query: 239 LYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGRDFI 298
GVA+HHA LT ER LI AY AGTL++ T++LAAG+NLPA+RVI+ + +G D +
Sbjct: 439 PCGVAFHHAGLTTEERELIANAYDAGTLKVCVATASLAAGINLPARRVILHGARMGIDLV 498
Query: 299 SLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHM--DPPTLVD 356
M +QM GRAGR G E GE+ + C+ D +M+A I+S + D +
Sbjct: 499 GPAMLRQMRGRAGRKGKDEVGETYLCCR-RNDLEAVVDLMHADLPQITSCLVSDERRIRR 557
Query: 357 LILEVVAANLCSSLEDVKTLIKHTLFY--------QLKSPEDQ-QTFLETTLSEIVASLL 407
+LEV+A L +S E + + T+ + EDQ + ++E L ++
Sbjct: 558 ALLEVIAIKLATSREALDEYVGRTMLACEQRLAEKETDEWEDQIRGYIEIGLEKLKEMGF 617
Query: 408 ASKGTMLTMNEAGHLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLV 467
+ T+ E S T + A V + L + + I+ +L F + +H+L+
Sbjct: 618 ITV-TVDERFETASYSTTKLGGAIVASSLDPEDGVFIHKELERALKGFVMDGEMHVLYNF 676
Query: 468 IPLEYRIPSDGILLSRSKVYDRYTKFHPQTLRVAEALG----VTENLVALNVTGKLKDEK 523
P+ +G ++ ++ K LRV LG V ++ + + DE+
Sbjct: 677 TPVSGL--GNGTSVNWKVFWNEMEKLDESGLRVMSFLGLKPVVLNRMLQGGILKETTDEE 734
Query: 524 KALL---CRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEEL 580
K RF+ A L D+ N +VA+ Y + +Q FA+ + +FCE +
Sbjct: 735 KDTARRYHRFYLALQLRDLCNEVPIHRVAQKYDVPRGTVQTLAQTCQGFAAGMIKFCEAM 794
Query: 581 PELWCYKQLLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIARADAKE 640
L L +L +L + VK AR + G+ ++ +IA AD KE
Sbjct: 795 GWG-AMAAALDHFADRLKAGARADLLSLSKITFVKSRTARVFWDNGFKTVAVIANADPKE 853
Query: 641 MV 642
+V
Sbjct: 854 LV 855
>gi|315044041|ref|XP_003171396.1| DNA polymerase theta [Arthroderma gypseum CBS 118893]
gi|311343739|gb|EFR02942.1| DNA polymerase theta [Arthroderma gypseum CBS 118893]
Length = 916
Score = 210 bits (534), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 178/626 (28%), Positives = 290/626 (46%), Gaps = 51/626 (8%)
Query: 50 GSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATI 109
+ L+ + I++ ID++G+IV+DE HML++ RG ++E +V+K+L L++ IQI MSAT+
Sbjct: 257 ANSLVNTAIEDCTIDKLGVIVLDELHMLDDEHRGYLIEIMVTKLLLLQQDIQIIGMSATL 316
Query: 110 GNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSFDGKSL-TEIYADNLDYS----- 163
N L+ ++ Y+ RP E++ + ++ K L ++ N S
Sbjct: 317 SNTEVLAKWLNANYYISRYRPIPVEEFLVFEDYIYPVPATKGLLRKMIKPNTSNSHNIPA 376
Query: 164 -------------LTGSGPDAVLHLV----QGNLMVLIFCSSKIACSNLALRLQFDRFPG 206
L P+A++ L L+FC S+ AC A+ L D P
Sbjct: 377 SACRVIRKSEFRELAFPIPNAMVALACETAAAGYGALVFCGSRQACQTNAV-LIGDAMPD 435
Query: 207 TKEYKKQEKE-DLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGT 265
T + EK DL+ +L+ G L T + I GVA+HHA LT ER LI E + +G
Sbjct: 436 TLDADIIEKRLDLVASLQSLPCG-LDTYFAKTIPRGVAFHHAGLTTEERVLIAEGFDSGI 494
Query: 266 LQIICCTSTLAAGVNLPAQRVIIRDSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLC 325
L+++ T +LAAG+NLPA+RVI+ + +GR+ + M +QM GRAGR G E GE+ LC
Sbjct: 495 LKVLVATCSLAAGINLPARRVILCGARMGRELVGPAMLRQMRGRAGRKGKDEVGET-YLC 553
Query: 326 KTMQDFLRFSSMMNAGPEPISSHMDP--PTLVDLILEVVAANLCSSLEDVKTLIKHTLFY 383
T +D+ ++ A I+S + P + +LE +A L S + + I+ +L +
Sbjct: 554 CTSKDWEDVVGLLEAELPAIASGLAPGRAGIKRALLEAIATKLVSGRDAINDYIRSSLLF 613
Query: 384 QLKSPEDQQTFLE---TTLSEIVASLLASKGTMLTMNEAGHLSLTSIAKAAVQAGLSHDV 440
+ E Q T L+ +TL E++ + L + T T + A V + S D
Sbjct: 614 H--NDEAQDTLLDMVQSTLQELLDAELVKSSSDETFEP------TQLGLAIVASAFSPDD 665
Query: 441 CLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEYRIPSDGILLSRSKVYDRYTKFHPQTLRV 500
L IY +L F + +H+ ++ PL+ D + D LR
Sbjct: 666 GLFIYGELKRALQAFVMDGEMHIFYMFSPLQVSAEIDWMAFR-----DEVHGLDDSGLRT 720
Query: 501 AEALGVTENLVALNVTGKLKDEKKALL---CRFFHACILYDVLNFDNHQKVAKMYGIQNS 557
+ +GV LV G + + ALL R + A L D+ N +AK Y I
Sbjct: 721 IQLVGVDPGLVNSIAMGHVSIKDPALLRVYNRVYTAFQLRDLSNEIPVSSIAKKYNIARG 780
Query: 558 HLQNFLNVTSYFASKVYRFCEELPELWCYKQLLTD-LPQTLMYCRAPNLRALMDLPGVKI 616
+Q FA+ + +FC+ + W ++ D + L +L + + VK
Sbjct: 781 AVQTLAQNCHGFAAGMAKFCQRMG--WDMLAVVLDHMRDRLQAGARADLLEMAQVTYVKS 838
Query: 617 GRARQLLNAGYSSLELIARADAKEMV 642
AR L G+ +L +A A ++V
Sbjct: 839 RTARLLWENGFKTLRSLAEAAPTDLV 864
>gi|380012133|ref|XP_003690142.1| PREDICTED: DNA polymerase theta-like [Apis florea]
Length = 1769
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 193/647 (29%), Positives = 321/647 (49%), Gaps = 58/647 (8%)
Query: 42 IYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKK--- 98
I I TIEK + LI L++EN + +G +++DE H++ +P RG +LE +++K+ Y+
Sbjct: 215 IAIATIEKANSLINHLMEENELINLGAVIVDELHLVGDPNRGYLLELLLTKLRYMTSRDE 274
Query: 99 --SIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSFDGK-----S 151
+IQ+ MSAT+ N++ L+ +++ Y RP +E + + ++ D K S
Sbjct: 275 NINIQLIGMSATLPNLSLLAKWLDAELYKTEFRPIPLNEQCKIGRNIY---DNKLCLIRS 331
Query: 152 LTEIYADNLDYSLTGSGPDAVLHL----VQGNLMVLIFCSSKIACSNLA-------LRLQ 200
L + N+D D +LHL + VLIFCS+K C LA +L
Sbjct: 332 LIPMPELNMD-------SDDILHLCIETISDGHSVLIFCSTKNWCEKLAEQIAIAFCKLG 384
Query: 201 FDRFPGTKEYKKQEKEDLI----EALKEENDGKLSTNLEECILYGVAYHHADLTAGERRL 256
+ K + Q +LI E LK G L L+ + +G+A+HHA LT ER +
Sbjct: 385 LENTQLGKILRDQLDSELISETLEQLKRSPTG-LDNVLKNTVSFGIAFHHAGLTMDERDI 443
Query: 257 IEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRD-SYVGRDFISLNMYKQMVGRAGRTGL 315
IE ++ +G+L+++ TSTL++GVNLPA+RVIIR + G+ SL Y+QM+GRAGR G
Sbjct: 444 IEGSFRSGSLRVLVATSTLSSGVNLPARRVIIRSPKFAGKLLDSLT-YRQMIGRAGRMGK 502
Query: 316 QESGESIMLCKTMQDFLRFSSMMNAGPEPISSHM-DPPTLVDLILEVVAANLCSSLEDVK 374
+GESI++CK + ++++A EPI S + D L+ +LE VA+ + + D++
Sbjct: 503 NTAGESILICKPNEQ-KSAETLISASLEPIESCLEDSAPLIRALLEAVASEVVYTPSDLE 561
Query: 375 TLIKHTLFYQLKSPEDQQTFLETTLSEIVASLLASKGTMLTMNEAGH--LSLTSIAKAAV 432
+ TL L + D + ++ + L+ ++ +L E GH T+ KA +
Sbjct: 562 LYVNCTLV-SLSNEYDSKDL----WNKAIKFLVDNEFLLLQKTEEGHNRWVATAFGKACL 616
Query: 433 QAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEY--RIPSDGILLSRSKVYDRY 490
A ++ L + +L + F L LH+++LV PL +I S + + +
Sbjct: 617 AASIAPREGLFLLEELQKARRCFVLDTELHVIYLVTPLTSGNQIGS----IDWMTFLELW 672
Query: 491 TKFHPQTLRVAEALGVTENLVALNVTGKLKDEK-KALLCRFFHACILYDVLNFDNHQKVA 549
RV + +GV E + V G ++ K + RF+ A L+D++ V
Sbjct: 673 KMLSESERRVGQLVGVEERFLTSAVRGIVRQGKLLNIHKRFYTALALHDLVREIPLNSVC 732
Query: 550 KMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELW-CYKQLLTDLPQTLMYCRAPNLRAL 608
K YG LQ S FA + +FC++L W C + L++ L + L L
Sbjct: 733 KKYGCCRGVLQTLQQSASTFAGMITQFCKQLG--WDCMELLVSQFQTRLQFGVCRELLDL 790
Query: 609 MDLPGVKIGRARQLLNAGYSSLELIARADAKEM-VAKIRHLPLRSAR 654
+ LP + RAR L G +S+ +A A+ ++ A + LP S +
Sbjct: 791 LRLPMLNGLRARSLYKHGITSVADLAIANELDVERALYKALPFESEK 837
>gi|429856175|gb|ELA31099.1| DNA-directed DNA polymerase [Colletotrichum gloeosporioides Nara
gc5]
Length = 752
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 177/635 (27%), Positives = 298/635 (46%), Gaps = 53/635 (8%)
Query: 42 IYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQ 101
I +CTIEK + L+ + I + I + +V+DE H++++ RG ++E + +K+L L + +Q
Sbjct: 80 IGVCTIEKANALVNTAIDDCSIKHLKAVVLDELHIIDDDHRGYLMELMGTKLLSLPQPVQ 139
Query: 102 IFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSFDG----KSLTEIYA 157
I MSAT+ NIN L+ ++ +Y RP E++ + ++ + K+ E+
Sbjct: 140 IIGMSATMSNINLLANWLGAHSYETRYRPVPIEEHLVYEGNIYPAATTSELLKTANELKT 199
Query: 158 DNLDYS-----LTGSG----PDAVLHLV--------QGNLMVLIFCSSKIACSNLALRLQ 200
L+ + + S D VL+ V + VL+F SS+ C + A R
Sbjct: 200 QQLENTRAIRRIESSDHKELKDPVLNAVVSLASETARSGYGVLVFASSRPGCESDA-RWI 258
Query: 201 FDRFPGTKEYKK---QEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLI 257
P + E ++ DL+ L+ G + LEE + GVA+HH + ER +I
Sbjct: 259 ARVMPASHELDPALVDKRIDLLAELRSLGTG-IDPVLEETVPAGVAFHHVE----EREII 313
Query: 258 EEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGRDFISLNMYKQMVGRAGRTGLQE 317
AY +G +++ T +LAAG+NLPA+RVI+ ++ +GRDF+ +M +QM GRAGR G E
Sbjct: 314 ASAYDSGVIKVCIATCSLAAGINLPARRVILHNARMGRDFVGPSMLRQMRGRAGRKGKDE 373
Query: 318 SGESIMLCKTMQDFLRFSSMMNAGPEPISSHM--DPPTLVDLILEVVAANLCSSLEDVKT 375
GE+ + C+ D + +M+A I+S + D + +LEV+A L +S + +
Sbjct: 374 VGETYLCCRK-DDLEQVVDLMHADMPQITSGLITDKQRIQRALLEVIAVRLATSKDALDD 432
Query: 376 LIKHTLFYQLKSPEDQQTFLETTLSEIVASLLASKGTMLTMNEAGHLSLTSIAKAAVQAG 435
+ TL PE Q +ET+L L S G +T + G+ T + A V +
Sbjct: 433 YLSKTLLAHAGPPEPLQECVETSLKN-----LQSMG-FITADVLGNYQPTKLGHAIVASA 486
Query: 436 LSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEYRIPSDGILLSRSKVYDRYTKFHP 495
L D + I+ +L F + +H+L+ P+ + + R+++ + H
Sbjct: 487 LDPDDGVFIHKELEKALQAFVMDGEMHILYTFTPVHDFGTNINWQVFRNEMENLDDSGH- 545
Query: 496 QTLRVAEALG----VTENLVALNVTGKLKDEKKALL---CRFFHACILYDVLNFDNHQKV 548
RV LG V L + + E+K ++ RF+ A L D+ N V
Sbjct: 546 ---RVLGFLGLKCAVINRLAQGSTLKETTPEEKEIVRVHRRFYLAFQLRDLCNEVPVHAV 602
Query: 549 AKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELW-CYKQLLTDLPQTLMYCRAPNLRA 607
A+ Y + +QN FA+ + +FCE + W L L +L A
Sbjct: 603 ARKYDVPRGAVQNLSQTCHGFAAGMIKFCEHMG--WGVISAALDHFSDRLRAGAKSDLLA 660
Query: 608 LMDLPGVKIGRARQLLNAGYSSLELIARADAKEMV 642
L + VK AR G+ S+ +A AD KE++
Sbjct: 661 LAQITFVKSRTARVFWENGFRSVAAVANADPKELL 695
>gi|350296152|gb|EGZ77129.1| P-loop containing nucleoside triphosphate hydrolase protein
[Neurospora tetrasperma FGSC 2509]
Length = 1061
Score = 208 bits (530), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 182/658 (27%), Positives = 304/658 (46%), Gaps = 64/658 (9%)
Query: 42 IYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQ 101
+ +CT+EK + L+ + I + I ++ +V+DE HM+++ RG +LE + +K+L L + +Q
Sbjct: 359 VAVCTMEKANSLVNAAITDCSISKLRAVVLDECHMIDDGYRGYLLELMTTKLLCLDQQVQ 418
Query: 102 IFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLD 161
I AMSAT+ NI L ++ G +Y + RP E++ D +++ + SL + A LD
Sbjct: 419 IIAMSATLTNIRLLKDWLGGHSYETHYRPVPVEEHLVYDGKIYPATTTASLLKT-ATQLD 477
Query: 162 ------YSLTGSGP-----------------------DAVLHLV--------QGNLMVLI 184
+ T GP D VL+ V + VL+
Sbjct: 478 TRNVTTTTTTAQGPPPSTTSSLQHIRFIHPSLHREFKDPVLNAVVALANETARAGYGVLV 537
Query: 185 FCSSKIACSNLALRLQ--FDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGV 242
F SS+ C + A+ + F ++ + DL+ L+ + G L LE+ I GV
Sbjct: 538 FSSSRAGCESDAVLISRVLPSFQEADPLIRERRLDLLNDLRSSSTG-LDPKLEQTIPCGV 596
Query: 243 AYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGRDFISLNM 302
A+HHA LT ER LI AY AGTL++ T++LAAG+NLPA+RVI+ + + D + M
Sbjct: 597 AFHHAGLTTEERELIANAYDAGTLKVCVATASLAAGINLPARRVILHGARMVIDLVGPAM 656
Query: 303 YKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHM--DPPTLVDLILE 360
+QM GRAGR G E GE+ + C+ D +M+A I+S + D + +LE
Sbjct: 657 LRQMRGRAGRKGKDEVGETYLCCR-RNDLEAVVDLMHADLPQIASCLVSDERRIRRALLE 715
Query: 361 VVAANLCSSLEDVKTLIKHTLFY--------QLKSPEDQ-QTFLETTLSEIVASLLASKG 411
V+A L +S E + + T+ + + EDQ + ++E L E + +
Sbjct: 716 VIAIKLATSREALDEYVGRTMLACEQRLAEKETEEWEDQIRGYIEIGL-EKLKEMGFITV 774
Query: 412 TMLTMNEAGHLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLE 471
T+ E S T + A V + L + + I+ +L F + +H+L+ P+
Sbjct: 775 TVDERFETASYSTTKLGGAIVASSLDPEDGVFIHKELERALKGFVMDGEMHVLYNFTPVS 834
Query: 472 YRIPSDGILLSRSKVYDRYTKFHPQTLRVAEALG----VTENLVALNVTGKLKDEKKALL 527
+G ++ ++ K H LRV LG V ++ + + DE+K
Sbjct: 835 GL--GNGTSINWKVFWNEMEKLHESGLRVMSFLGLKPVVLNRMLQGGILKETTDEEKDTA 892
Query: 528 ---CRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELW 584
RF+ A L D+ N +VA+ Y + +Q FA+ + +FCE +
Sbjct: 893 RRYHRFYLALQLRDLCNEVPIHRVAQKYDVPRGTVQTLAQTCQGFAAGMIKFCEAMGWG- 951
Query: 585 CYKQLLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIARADAKEMV 642
L L +L +L + VK A + G+ ++ +IA+AD KE+V
Sbjct: 952 AMAAALDHFADRLKAGARADLLSLSKITFVKSRTAGVFWDNGFKTVAVIAKADPKELV 1009
>gi|320586873|gb|EFW99536.1| DNA-directed DNA polymerase [Grosmannia clavigera kw1407]
Length = 1131
Score = 208 bits (529), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 184/650 (28%), Positives = 292/650 (44%), Gaps = 64/650 (9%)
Query: 42 IYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQ 101
I + TIEK + LI + I + I ++ +IV+DE HM+++ RG I E + +K+L L S+Q
Sbjct: 303 IGVATIEKANALINTAIDDGTISDLKVIVLDELHMVDDSHRGYIFELMATKLLCLDHSVQ 362
Query: 102 IFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSFDGK-----SLT--- 153
I N++ L+T++ +Y RP E++ D ++ + + +LT
Sbjct: 363 I--------NMDLLATWLRAYSYETRYRPIPIEEHLVYDGEIYVAEEANRRFLDALTIPD 414
Query: 154 -----------EIYADNLDYSLTGSGPDAVLHLV----QGNLMVLIFCSSKIACSNLALR 198
I + L S +AV+ L + L+F SS+ A + AL
Sbjct: 415 KKETAAPTQPLRIIQPSGHRELQDSVTNAVVSLANETARSGYGALVFSSSRAASESDAL- 473
Query: 199 LQFDRFPGTKEYKKQEKE---DLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERR 255
L P E E DL+ L+ N G L + L + + GVA+HHA +T ER
Sbjct: 474 LISRVMPTPAEVDPAVSEARLDLVSTLRGLNTG-LDSVLSQTVPVGVAFHHAGMTTEERD 532
Query: 256 LIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGRDFISLNMYKQMVGRAGRTGL 315
LI AY G L++ T LAAG+NLPA+RVI+ ++ +GR+ I M +QM GRAGR G
Sbjct: 533 LIANAYDNGVLKVCVATCGLAAGINLPARRVILHNARMGRELIGPAMLRQMRGRAGRKGK 592
Query: 316 QESGESIMLCKTMQDFLRFSSMMNAGPEPISS--HMDPPTLVDLILEVVAANLCSSLEDV 373
E GE+ + C+ D +M+A ISS D L +LEV+ L +S E V
Sbjct: 593 DEVGETYLCCRGA-DVDDMLDLMHAELPHISSCLQEDKRRLQRALLEVITVRLATSPESV 651
Query: 374 KTLIKHTLFYQLK---------SPEDQQTFLETTLSEIVASLLASKGTMLTM-----NEA 419
++ TL Y D QT + L + A + S T+ M E
Sbjct: 652 HAYVEKTLLYHSVVNSCADDGIPANDGQTAAKADLQPLWADVETSLETLQRMGFVSKGEF 711
Query: 420 GHLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEYRIPSDGI 479
G T KA V + L + + I+S+L F L +H+L+ P+ I G
Sbjct: 712 GDYEPTRFGKAVVASALDPEDAVFIHSELERALQAFVLDGEMHVLYTFTPVHDTI---GT 768
Query: 480 LLSRSKVYDRYTKFHPQTLRVAEALGVTENLVA-LNVTGKLKD------EKKALLCRFFH 532
++ + ++ + LRV LG+ ++++ + G LK+ E + RF+
Sbjct: 769 AINWRRFWEEMEQLDESGLRVLHFLGLKPSIISKMLRGGTLKESTPEEKETARIYRRFYL 828
Query: 533 ACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELWCYKQLLTD 592
A L D+ N +VA+ Y +QN FA+ + +FCE + + +L
Sbjct: 829 ALQLRDLCNEMPIHRVAQKYDSPRGAVQNLEQTCEGFAAGMIKFCEHM-DWGAMASVLEH 887
Query: 593 LPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIARADAKEMV 642
L +L AL + VK AR G+ ++ +A D +E+V
Sbjct: 888 FVDRLKAGAKADLLALAKIAFVKSRTARVFWENGFKTVATVANTDPRELV 937
>gi|47216119|emb|CAG11187.1| unnamed protein product [Tetraodon nigroviridis]
Length = 2382
Score = 208 bits (529), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 190/695 (27%), Positives = 333/695 (47%), Gaps = 92/695 (13%)
Query: 42 IYICTIEKGSKLIGSLIQENRIDEIG-----------------------LIVIDEFHMLN 78
+ +CTIEK + LI LI+E + +G ++V+DE HM+
Sbjct: 125 VAVCTIEKANSLINRLIEEENMGLLGKNTWFFLTSWCHCDFKSPIFAPGMVVVDELHMVG 184
Query: 79 EPQRGPILECVVSKVLY----------LKKSIQIFAMSATIGNINALSTFIEGITYVENS 128
+ RG +LE +++K+ Y L + IQI MSAT+ N++ L++++ Y +
Sbjct: 185 DSGRGYLLELLLTKICYIAQKQNTAGSLSEGIQIIGMSATLPNLSLLASWLCAELYQTDY 244
Query: 129 RPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHL----VQGNLMVLI 184
RP E++ V +V+ K L+ + ++ G D ++ L V+ VL+
Sbjct: 245 RPVPLQEHLKVGCKVYD----KDLSVVRQFTPALNVQGDD-DHIVSLCYETVREGCSVLL 299
Query: 185 FCSSKIACSNLALRLQFDRFPGTKEYKKQEKE------------DLIEALKEENDGKLST 232
FC SK C LA + + + E E D++ L G L +
Sbjct: 300 FCPSKNWCEKLADSIAREFYNLRNSEHSNEAELPPVSLDQQGLVDVVAQLGRTPAG-LDS 358
Query: 233 NLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSY 292
L+ + +GVA+HHA LT ER ++E A+ G ++++ TSTL++GVNLPA+RVI+R
Sbjct: 359 ILQRTVPWGVAFHHAGLTFDERDVLEGAFRQGLVRVLAATSTLSSGVNLPARRVIVRTPT 418
Query: 293 VGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHM--- 349
+ YKQM GRAGR G+ GES+++CK + + S++ +PISS +
Sbjct: 419 FNGHLLDPLTYKQMSGRAGRKGVDTIGESLLVCKEAERH-KGISLLKGSLQPISSCLVRR 477
Query: 350 ----DPPTLVDLILEVVAANLCSSLEDVK-----TLIKHTLFYQLKSPEDQQTFLETTLS 400
+++ ILE++ + S+ +DV+ +L+ +L +K D++T + +
Sbjct: 478 EGEGVTTSMLRAILEIIVGGVASTPQDVRLYASCSLLAASLKLNMKKELDEETS-KGAIE 536
Query: 401 EIVASLLASKGTMLTMNEAGHLSL---TSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCL 457
V L+ ++ +++ + G L T + A + + LS L +++DL F L
Sbjct: 537 ACVEWLMDNE--FISIQKEGEEELYCPTQLGAATLSSSLSPPESLAVFADLQRAMKGFVL 594
Query: 458 LNSLHMLFLVIPLEYRIPSDGILLSRSKVYDRYTKFHPQTLRVAEALGVTENLVALNVTG 517
N LH+L+L+ PL ++ + + + + + RVAE +GV E +A +V+G
Sbjct: 595 ENDLHILYLITPLY----AEWTTIDWYQFFCLWEQLSSSMKRVAELVGVQEGFLARSVSG 650
Query: 518 KL--KDEKK----ALLCRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFAS 571
K+ K EK+ A+ RFF +L+D++N VA + LQ+ S +A
Sbjct: 651 KIIAKTEKQRRQMAVHKRFFTTLVLHDLVNEVPLGTVASKFSCNRGQLQSLQQSASTYAG 710
Query: 572 KVYRFCEELPELWCYKQLLTDLPQTLMYCRAPNLRALMDLPGV---KIGRARQLLNAGYS 628
V FC+ L W +LL QT + R L+DL V K +AR L G
Sbjct: 711 MVTVFCKRL--GWHNMELLLSQYQTRLSFGI--QRELVDLVRVSLLKALQARTLYAQGLR 766
Query: 629 SLELIARADAKEMVAKIRH-LPLRSARNLISAAKL 662
++ +ARA ++ +R+ +P +S++ + +++
Sbjct: 767 TVAELARATVADVEKALRNAVPFKSSKRAVDESEV 801
>gi|313233190|emb|CBY24305.1| unnamed protein product [Oikopleura dioica]
Length = 1902
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 183/680 (26%), Positives = 317/680 (46%), Gaps = 83/680 (12%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+ EKY + + + K + +AG G +P + K I +CTIEK + ++ L
Sbjct: 79 IAREKYFAFREIFQNTKIRIGLFAG--GNHPTGG--IEKNDILVCTIEKANSIVNYLKMT 134
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIE 120
D +G I +DE H+L E RG ILE + +K + +IQI MSATI N++ ++ +++
Sbjct: 135 KIFDSLGAIFLDEIHLLGESGRGFILELLCTKAMTWG-NIQIVGMSATIPNLSQIAGWLK 193
Query: 121 GITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPD-----AVLHL 175
I + + RP + ++++ G L + + + + P A+L L
Sbjct: 194 AIEFQTDFRPIPLEINLCFKNQLWE-VSGARLKRLTSVEIPIDIGKDPPKDPEQYAILSL 252
Query: 176 -----VQGNLMVLIFCSSKIACSNLALRL--QFDRFPGTKE-YKKQEKEDLIEALKEEN- 226
+QG+ ++FC +K C + L Q P + ++ + E+ E L E
Sbjct: 253 LLQTIIQGH-QAMVFCPTKDWCEKMVKTLVEQTALIPNRSDVFQSKIFEEFREVLIEARI 311
Query: 227 --DGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQ 284
D + N+++ G+ +HHA LT ER ++EE + AG ++I+ T+TL+AGVNLPA+
Sbjct: 312 WPDTSMYLNVKQ----GICFHHAGLTTDERSVVEEGFRAGVVRILMATTTLSAGVNLPAR 367
Query: 285 RVIIRDSY-VGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFS-SMMNAGP 342
V++R Y ++ I +++QM GRAGR G+ ++G ++++C + + + +++
Sbjct: 368 LVVVRSPYGFKKELIKARVFQQMCGRAGRKGIDDAGHAVLMCPNVPSAQKDARQLISNKA 427
Query: 343 EPISSHMDPPTLVDLILEVVAAN--LCSSLEDVKTLIKHTLF-YQLKSPEDQQTFLETTL 399
E I S +D + ILE +A L ++E+++ I TL+ +QL ED L
Sbjct: 428 EMILSQLDRTQIQRAILEQIATTDKLTVTVEEIEEFISSTLYHHQL---ED--------L 476
Query: 400 SEIVASLLASKGTMLTMNEAGHLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLN 459
SE + +T + +AAV AG+ L ++ DL + L
Sbjct: 477 SE------------------SDIEITKLGEAAVGAGMPPVTALSVFDDLSSASRSLNLTT 518
Query: 460 SLHMLFLVIPLEYRIPSDGILLSRSKVYDRYTKFHPQTLRVAEALGVTENLVA------- 512
LH+++L P++ L+ S V + P L VA V LV
Sbjct: 519 DLHLVYLCTPIQE------TNLNFSTVASMFDILEPAALDVANKCQVDVKLVKKIARHGM 572
Query: 513 LNVTGKLKDEKKALLCRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASK 572
KL + K ++ RF+ A ++D++N + V+ Y + LQ+ S +A
Sbjct: 573 PRKMDKLGNRKLQIISRFYRALGIFDLINEIPIEIVSSKYQVPRGTLQSLQISASQYAGM 632
Query: 573 VYRFCEELPELWCY-KQLLTDLPQTLMYCRAPNLRALMDL---PGVKIGRARQLLNAGYS 628
+ FCE+L W + + LL + A R L+DL P + RARQ GY
Sbjct: 633 ITIFCEKLG--WAHLRNLLATFQNQI---EAGVHRELLDLVRCPFISARRARQFYKLGYK 687
Query: 629 SLELIARADAKEMVAKIRHL 648
L+ I +AD E+V + +
Sbjct: 688 RLKNIVKADISEIVEAFKQM 707
>gi|145350926|ref|XP_001419844.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580076|gb|ABO98137.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 874
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 169/659 (25%), Positives = 305/659 (46%), Gaps = 39/659 (5%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+ E+ SL +F L G +G P+ ++N ++ + T E+ +++ L++E
Sbjct: 219 LCEERADSLENLFAGTEFRLRRMYGGRGGAFPSDSKMN--TLLVLTPERANQVTSRLLEE 276
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYL----------KKSIQIFAMSATIG 110
NR+ E+ +++DE H++ + RG +E ++K++Y ++S+QI MSA+I
Sbjct: 277 NRLHELSAVIVDELHLIQDDDRGATMELFLTKLVYAIGNTRGGTRDQRSMQIIGMSASIP 336
Query: 111 NINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPD 170
N+ AL+ ++ YV N RP + V V +F K + + S +
Sbjct: 337 NLKALADWLFARLYVTNFRPIRLEVCVKVGCEIFHPAT-KHVIRTMLNKSPNSDNAHIAE 395
Query: 171 AVLHLVQGNLMVLIFCSSKIACSNLALRLQFD---RFPGTKEYKKQEKEDLIEALKEEND 227
+ + VL+FCS++ AC LA +L+ P +++++ +
Sbjct: 396 LAQETIDEDGSVLVFCSTRAACKTLADQLRNMMQCTVPRQIHNATLSRDEIVVGYETALG 455
Query: 228 GKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVI 287
K +++ I GVA+HHA L+ E + +AY G ++++CCTSTLA GVNLPA+RVI
Sbjct: 456 AK--SDVLPYIKDGVAFHHAGLSREENEAVADAYKRGVIRVLCCTSTLATGVNLPARRVI 513
Query: 288 IRDSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISS 347
+RD+ +G ++ +QM GRAGR GL SG +I+ C + + ++++ + ++S
Sbjct: 514 LRDTNMGWKKLNARDIQQMTGRAGRAGLDTSGSAIIFCPKLAELDNVCALVDGPSDELTS 573
Query: 348 HMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQLKSPEDQQTFLETTLSEIVASL- 406
+ + ++LE VAA L DV+ +K TL L F E+ + +L
Sbjct: 574 AVAEVGMRRIMLEAVAAGLVKIPTDVQDYVKCTLLSALND------FDESVRQTAIDALR 627
Query: 407 LASKGTMLTMNEAGHLSLTSIAKAAVQAGLSH-DVCLIIYSDLLHNKLNFCLLNSLHMLF 465
K +L N +L S AV G+ D I D+ + + L LH+L+
Sbjct: 628 WCQKNALLVWNVTAYLWSASALGNAVAGGMMPLDQVQPIIRDVKTAREDLVLSTPLHLLY 687
Query: 466 LVI-PLEYRIPSDGILLSRSKVYDR----YTKFHPQTLRVAEALGVTENLVALNVTGK-- 518
L+ P + L++ + D ++ + + LR+AE +G+ E V + K
Sbjct: 688 LLTAPPVLDDEGAPVNLNKFRTLDALAVLWSNLNAEQLRIAEKVGIDERYVQRLRSNKRD 747
Query: 519 --LKDEKKALLCRFFH-ACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYR 575
+ + + C+ FH A L D++ + + YG++ + + FAS V
Sbjct: 748 ITIAHQLQRFACQRFHVALFLTDLIQEVPIESITSKYGVRAFDVLEEQKSCARFASYVAA 807
Query: 576 FCEELPELWC-YKQLLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELI 633
C L W + L+T + + + L +P + I RAR L G ++ + I
Sbjct: 808 ICGTLG--WGDMEGLITRISDRITAGAQEEILELTKIPYIGIHRARALYTGGITTPKAI 864
>gi|332019330|gb|EGI59836.1| Helicase POLQ-like protein [Acromyrmex echinatior]
Length = 2176
Score = 205 bits (521), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 179/610 (29%), Positives = 293/610 (48%), Gaps = 54/610 (8%)
Query: 23 YAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQR 82
Y + G PP + + TIEK + L+ L++EN + +G ++IDE H+L +P R
Sbjct: 302 YGFMGGSVPPGG--FATTDVAVATIEKANSLVNRLMEENDLSSLGAVIIDELHLLGDPNR 359
Query: 83 GPILECVVSKVLYL-----KKSIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYV 137
G +LE +++K+ Y+ +IQ+ MSAT+ N+ L+ ++ Y RP +EY
Sbjct: 360 GYLLELLLTKLKYMTIHNNDVNIQLIGMSATLPNLTLLAKWLNAELYKTEFRPIPLNEYC 419
Query: 138 TVDKRVFQSFDG--KSLTEIYADNLDYSLTGSGPDAVLHL----VQGNLMVLIFCSSKIA 191
+ ++ + + L E+ +D D +L L + VLIFC +K
Sbjct: 420 KIGANIYDNKLNLVRKLIELQELGIDV-------DNILQLCIETISAGHSVLIFCPTKKW 472
Query: 192 CSNLALRLQFDRFP---GTKEYKKQEKEDL--------IEALKEENDGKLSTNLEECILY 240
C LA ++ F G ++ + K+++ +E LK G L L+ I +
Sbjct: 473 CEKLAEQIATAFFKLGCGDTKFGEMLKKEIDSTLIQETLEQLKRSPSG-LDNILKNTISF 531
Query: 241 GVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGRDFISL 300
G A+HHA LT ER +IE ++ G+L+++ TSTL++GVNLPA+RVIIR G ++
Sbjct: 532 GTAFHHAGLTMDERDIIEGSFRTGSLRVLIATSTLSSGVNLPARRVIIRSPLFGGSPLNT 591
Query: 301 NMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHM-DPPTLVDLIL 359
YKQM+GRAGR G +GESI++CK + S + A +PI S + D L+ +L
Sbjct: 592 LTYKQMIGRAGRMGKDSAGESILICKPNERNAAASLLSAAL-DPIESCLNDFSLLIRALL 650
Query: 360 EVVAANLCSSLEDVKTLIKHTLFYQLKSPEDQQTFLETTLSEIVASLLASKGTML-TMNE 418
E VA+ + + +D++ I TL L D Q F +E + LL ++ +L T
Sbjct: 651 EAVASEVLYTYKDLELYINCTLL-SLNEQSDVQIF----SNEAIKFLLDNEFLLLQTTER 705
Query: 419 AGHLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEYRIPSDG 478
T + KA + A + L ++ +L + F L LH+++LV PL S G
Sbjct: 706 ESRWVATPLGKACLAASIPPREGLFLFEELQKARRCFVLDTELHVIYLVTPL-----SSG 760
Query: 479 ILLSRSK---VYDRYTKFHPQTLRVAEALGVTENLVALNVTGKLKDEKK-ALLCRFFHAC 534
+ ++ + RV + +GV E V + G +K K + RF+ A
Sbjct: 761 CQIGTVDWMTFHELWNTMSESERRVGKLVGVEERFVLSAIRGIVKSGKSLNIHRRFYSAL 820
Query: 535 ILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELW-CYKQLLTDL 593
L+D++ V K YG LQ + +A V +FC++L W C + L++
Sbjct: 821 ALHDLVKEVPLHVVCKKYGCCRGVLQTLQQSAATYAGMVTQFCKQLG--WDCMELLVSQF 878
Query: 594 PQTLMY--CR 601
L + CR
Sbjct: 879 QTRLQFGVCR 888
>gi|380492466|emb|CCF34582.1| DEAD/DEAH box helicase [Colletotrichum higginsianum]
Length = 778
Score = 204 bits (520), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 178/642 (27%), Positives = 291/642 (45%), Gaps = 66/642 (10%)
Query: 42 IYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQ 101
I +CTIEKG+ L+ + I + I + +V+DE HM+++ RG ++E + +K+L L + IQ
Sbjct: 110 IGVCTIEKGNALVNTAIDDCSIKHLKAVVLDELHMIDDDHRGYLMELMGTKLLTLPQPIQ 169
Query: 102 IFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLD 161
I MSAT+ NIN L++++ +Y RP E++ D V+ + L A L
Sbjct: 170 IIGMSATMSNINLLASWLGAHSYETRYRPVPIEEHLVYDGNVYPAATTSELLNT-ASRLK 228
Query: 162 YSLTGSGP--------------------DAVLHLV--------QGNLMVLIFCSSKIACS 193
TG+ P D VL+ V + L+F SS+ C
Sbjct: 229 ---TGTQPAQQASRAVRRVEPSSHKEFQDPVLNAVVSLASETARAGYGALVFASSRYGCE 285
Query: 194 NLALRLQFDRFPGTKEYKK---QEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLT 250
A R P E +++ DL+ L+ G L LEE + GVA+H
Sbjct: 286 YDA-RWIARVMPTQDELDPDLVEKRVDLLAELRSLGTG-LDPVLEETVPMGVAFHQ---- 339
Query: 251 AGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGRDFISLNMYKQMVGRA 310
ER LI AY AG +++ T +LAAG+NLPA+RVI+ ++ +GRDF+ +M +QM GRA
Sbjct: 340 --ERDLIANAYDAGVIKVCIATCSLAAGINLPARRVILHNARMGRDFVGPSMLRQMRGRA 397
Query: 311 GRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHM--DPPTLVDLILEVVAANLCS 368
GR G E GE+ + C+ D + +M+A I+S + D + +LEV+A L +
Sbjct: 398 GRKGKDEVGETYLCCRK-DDLEQVVELMHAEMPQITSGLMTDKQRIQRALLEVIAVRLAT 456
Query: 369 SLEDVKTLIKHTLFYQLKSPEDQQTFLETTLSEIVASLLASKGTMLTMNEAGHLSLTSIA 428
S + + TL S + ++ +E +L + A+ +T + G+ T +
Sbjct: 457 SRCALDEYVSKTLLSHSGSFDSLRSCVEASLQNLQAT------NFVTTDVCGNYQPTKLG 510
Query: 429 KAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEYRIPSDGILLSRSKVYD 488
KA V + L D + I+ +L F + +H+L+ P++ + + R+++ +
Sbjct: 511 KAIVASALDPDDGVFIHKELERALQAFVMDGEMHILYTFTPVQDFGHNINWRVFRNEMEN 570
Query: 489 RYTKFHPQTLRVAEALGVTENLVALNVTGKLKDEKKA-------LLCRFFHACILYDVLN 541
H RV LG+ ++ G E A + RF+ A L D+ N
Sbjct: 571 LDGSGH----RVLGFLGLKRAVINRLAQGSTLKEATAEEKETARVHRRFYMAFELRDLCN 626
Query: 542 FDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELWCYKQLLTD-LPQTLMYC 600
VA+ Y + +Q FA+ + +FCE + W D L
Sbjct: 627 EMPIHAVARKYDVPRGAVQTLSQTCHGFAAGMIKFCEHMG--WGMMAAALDHFSDRLRAG 684
Query: 601 RAPNLRALMDLPGVKIGRARQLLNAGYSSLELIARADAKEMV 642
+L AL + VK AR G+ S+ +A AD E++
Sbjct: 685 AKADLLALAQITFVKSRTARVFWENGFRSVAAVANADPNELL 726
>gi|340722505|ref|XP_003399645.1| PREDICTED: LOW QUALITY PROTEIN: DNA polymerase theta-like [Bombus
terrestris]
Length = 2005
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 195/647 (30%), Positives = 323/647 (49%), Gaps = 59/647 (9%)
Query: 42 IYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYL----- 96
I I TIEK + L+ L++EN + +G ++IDE H++ +P RG +LE +++K+ Y+
Sbjct: 342 IAIATIEKANSLVNHLMEENELINLGSVIIDELHLVGDPNRGYLLELLLTKLKYMTFRNE 401
Query: 97 KKSIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSFDGK-----S 151
+IQ+ MSAT+ N++ L+ +++ Y RP +E + + ++ D K +
Sbjct: 402 NVNIQLIGMSATLPNLSILAKWLDAELYKTEFRPIPLNEQCKIGRSIY---DNKLCLIRN 458
Query: 152 LTEIYADNLDYSLTGSGPDAVLHL----VQGNLMVLIFCSSKIACSNLA-------LRLQ 200
LT + +D D +LHL + VLIFCS+K C LA +L
Sbjct: 459 LTPMPELTMD-------SDDILHLCIETISDGHSVLIFCSTKNWCEKLAEQIAAAFCKLG 511
Query: 201 FDRFPGTKEYKKQEKEDLI----EALKEENDGKLSTNLEECILYGVAYHHADLTAGERRL 256
+ K ++Q LI E LK G L L+ + +G A+HHA LT ER +
Sbjct: 512 RENTKLGKTLRQQLDTALISETLEQLKRSPTG-LDNILKNTVSFGTAFHHAGLTMDERDI 570
Query: 257 IEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRD-SYVGRDFISLNMYKQMVGRAGRTGL 315
IE ++ +G+L+++ TSTL++GVNLPA+RVIIR + G+ SL Y+QM+GRAGR G
Sbjct: 571 IEGSFRSGSLRVLVATSTLSSGVNLPARRVIIRSPKFAGKLLDSL-TYRQMIGRAGRMGK 629
Query: 316 QESGESIMLCK-TMQDFLRFSSMMNAGPEPISSHMDPPT-LVDLILEVVAANLCSSLEDV 373
+GESI++C T Q +++A EPI S ++ T L+ +LE +A+ + + +
Sbjct: 630 DTAGESILMCNPTEQKAAEI--LLSASLEPIESCLEDSTPLIRALLEAIASEIVHTPLHL 687
Query: 374 KTLIKHTLFYQLKSPEDQQTFLETTLSEIVASLLASKGTMLTMNEAGHLSL-TSIAKAAV 432
+ IK TL S D+ + T ++ + L+ ++ +L E GH + T+ KA +
Sbjct: 688 ELYIKCTLV----SLSDEYNS-KGTWNDAIKFLVDNEFLLLQKTEDGHRWVATAFGKACL 742
Query: 433 QAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEY--RIPSDGILLSRSKVYDRY 490
A +S L + +L + F L LH+++LV PL +I S + + +
Sbjct: 743 AASISPRDGLFLLEELQKARRCFVLDTELHVIYLVTPLNSGNQIGS----IDWMTFLELW 798
Query: 491 TKFHPQTLRVAEALGVTENLVALNVTGKLKDEKK-ALLCRFFHACILYDVLNFDNHQKVA 549
RV + +GV E + L V G ++ K ++ RF+ A L+D++ V
Sbjct: 799 RMLSESERRVGQLVGVEERFLTLAVQGIIRPGKSLSIHKRFYTALALHDLVREVPLTVVC 858
Query: 550 KMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELW-CYKQLLTDLPQTLMYCRAPNLRAL 608
YG LQ S FA + +FC++L W C + L++ L + L L
Sbjct: 859 TKYGCCRGVLQTLQQSASTFAGMITQFCKQLG--WGCLELLVSQFQTRLQFGVCRELLDL 916
Query: 609 MDLPGVKIGRARQLLNAGYSSLELIARADAKEM-VAKIRHLPLRSAR 654
+ LP + RAR L G +S+ +A A+ ++ A + LP S +
Sbjct: 917 LRLPMLNGLRARSLYKHGITSVAELAIANELDVERALYKALPFESEK 963
>gi|350418478|ref|XP_003491870.1| PREDICTED: DNA polymerase theta-like [Bombus impatiens]
Length = 2240
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 193/652 (29%), Positives = 320/652 (49%), Gaps = 69/652 (10%)
Query: 42 IYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYL----- 96
I I TIEK + L+ L++EN + +G ++IDE H++ +P RG +LE +++K+ Y+
Sbjct: 342 IAIATIEKANSLVNHLMEENELINLGSVIIDELHLVGDPNRGYLLELLLTKLKYMTFRNE 401
Query: 97 KKSIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSFDGK-----S 151
+IQ+ MSAT+ N++ L+ +++ Y RP +E + + ++ D K +
Sbjct: 402 NVNIQLIGMSATLPNLSILAKWLDAELYKTEFRPIPLNEQCKIGRSIY---DNKLCLIRN 458
Query: 152 LTEIYADNLDYSLTGSGPDAVLHL----VQGNLMVLIFCSSKIACSNLA-------LRLQ 200
LT + +D D +LHL + VLIFCS+K C LA +L
Sbjct: 459 LTPMPELTMD-------SDDILHLCIETISDGHSVLIFCSTKNWCEKLAEQIAAAFCKLG 511
Query: 201 FDRFPGTKEYKKQEKEDLI----EALKEENDGKLSTNLEECILYGVAYHHADLTAGERRL 256
+ K ++Q LI E LK G L L+ + +G A+HHA LT ER +
Sbjct: 512 RENTKLGKTLRQQLDTALISETLEQLKRSPTG-LDNILKNTVSFGTAFHHAGLTMDERDI 570
Query: 257 IEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRD-SYVGRDFISLNMYKQMVGRAGRTGL 315
IE ++ +G+L+++ TSTL++GVNLPA+RVIIR + G+ SL Y+QM+GRAGR G
Sbjct: 571 IEGSFRSGSLRVLVATSTLSSGVNLPARRVIIRSPKFAGKLLDSL-TYRQMIGRAGRMGK 629
Query: 316 QESGESIMLCK-TMQDFLRFSSMMNAGPEPISSHMDPPT-LVDLILEVVAANLCSSLEDV 373
+GESI++C T Q +++ EPI S ++ T L+ +LE +A+ + + +
Sbjct: 630 DTAGESILMCNPTEQKAAEI--LLSTSLEPIESCLEDSTPLIRALLEAIASEIVHTPLHL 687
Query: 374 KTLIKHTLF-----YQLKSPEDQQTFLETTLSEIVASLLASKGTMLTMNEAGHLSL-TSI 427
+ IK TL Y KSP ++ + L+ ++ +L E GH + T+
Sbjct: 688 ELYIKSTLVSLSDEYNSKSP----------WNDAIKFLVDNEFLLLQKTEDGHRWVATAF 737
Query: 428 AKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEY--RIPSDGILLSRSK 485
KA + A +S L + +L + F L LH+++LV PL +I S +
Sbjct: 738 GKACLAASISPRDGLFLLEELQKARRCFVLDTELHVIYLVTPLNSGNQIGS----IDWMT 793
Query: 486 VYDRYTKFHPQTLRVAEALGVTENLVALNVTGKLKDEK-KALLCRFFHACILYDVLNFDN 544
+ + RV + +G+ E + V G ++ K ++ RF+ A L+D++
Sbjct: 794 FLELWKILSESERRVGQLVGIEERFLTSAVQGIVRPGKLLSIHKRFYTALALHDLVREVP 853
Query: 545 HQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELW-CYKQLLTDLPQTLMYCRAP 603
V YG LQ S FA + +FC++L W C + L++ L +
Sbjct: 854 LTVVCTKYGCCRGVLQTLQQSASTFAGMITQFCKQLG--WGCLELLVSQFQTRLQFGVCR 911
Query: 604 NLRALMDLPGVKIGRARQLLNAGYSSLELIARADAKEM-VAKIRHLPLRSAR 654
L L+ LP + RAR L G +S+ +A A+ ++ A + LP S +
Sbjct: 912 ELLDLLRLPMLNGLRARSLYKHGITSVAELATANELDVERALYKALPFESEK 963
>gi|336274120|ref|XP_003351814.1| hypothetical protein SMAC_00360 [Sordaria macrospora k-hell]
gi|380096096|emb|CCC06143.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 972
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 187/680 (27%), Positives = 313/680 (46%), Gaps = 69/680 (10%)
Query: 24 AGVKGQYPPTKR----QLNKKSIYICTIEKGSK---LIGSLIQENRIDEIGLIVIDEFHM 76
+G GQ P ++ + +K +I + GSK LI + I + I ++ +V+DE HM
Sbjct: 248 SGDLGQKQPQQKLWAKRPDKDTIRVVGFFGGSKANSLINAAITDCSISKLRAVVLDECHM 307
Query: 77 LNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEY 136
+++ RG +LE + +K+L L++ +QI AMSAT+ NI L ++ G +Y + RP E+
Sbjct: 308 IDDGFRGYLLELMTTKLLCLEQQVQIIAMSATLTNIRLLKDWLGGHSYETHYRPVPIKEH 367
Query: 137 VTVDKRVFQSFDGKSL----TEIYADNLDYSLTGSGP----------------------D 170
+ D +++ + SL T++ N + T P D
Sbjct: 368 LVYDGKIYPAATTASLLKTATQLDTRNAVTTTTQGLPPSTTSSLQHIRFIHPSTHREFKD 427
Query: 171 AVLHLV--------QGNLMVLIFCSSKIACSNLALRLQFDRFP---GTKEYKKQEKEDLI 219
V++ V + VL+F SS+ C + A+ + P T ++ + +L+
Sbjct: 428 PVMNAVVALANETARAGYGVLVFSSSRAGCESDAVLISRVLPPFSEVTDPLIRERRLNLL 487
Query: 220 EALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGV 279
L+ + G L LE+ I GVA+HHA LT ER LI AY AGT ++ T++LAAG+
Sbjct: 488 NELRSSSTG-LDPKLEQTIPCGVAFHHAGLTTEERELIANAYDAGTFKVCVATASLAAGI 546
Query: 280 NLPAQRVIIRDSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMN 339
NLPA+RVI+ + +G D + M +QM GRAGR G E GE+ + C+ D +M+
Sbjct: 547 NLPARRVILHGARMGIDLVGPAMLRQMRGRAGRKGKDEVGETYLCCR-RNDLEVVVDLMH 605
Query: 340 AGPEPISSHM--DPPTLVDLILEVVAANLCSSLEDVKTLIKHTL------FYQLKSPEDQ 391
A I+S + D + +LEV+A L +S E + + T+ + ++ E
Sbjct: 606 ADLPQIASCLVSDERRIRRALLEVIAIKLATSREALDEYVGRTMLACEQRLAEKETEERM 665
Query: 392 QTFLETTLSEIVASLLASKGTMLTMNEAGHLSLTSIAKAAVQAGLSHDVCLIIYSDLLHN 451
+ ++E L ++ + T+ E S T + A V + L D + I+ +L
Sbjct: 666 KGYVEAGLEKLKEMGFITV-TVDERYETASYSATKLGGAIVASSLDPDDGVFIHKELERA 724
Query: 452 KLNFCLLNSLHMLFLVIPLEYRIPSDGILLSRSKVYDRYTKFHPQTLRVAEALGVTENLV 511
F + +H+L+ P+ +G ++ ++ K LRV LG+ V
Sbjct: 725 LKGFVMDGDMHVLYNFTPVSDL--GNGTPINWRVFWNEMEKLDESGLRVMGFLGLKP--V 780
Query: 512 ALNVT---GKLK---DEKKALL---CRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNF 562
LN G LK DE+K RF+ A L D+ N +VA+ Y + +Q
Sbjct: 781 VLNRMLRGGILKETIDEEKDTTRRYHRFYLALQLRDLCNEIPIHRVAQKYDVPRGAVQTL 840
Query: 563 LNVTSYFASKVYRFCEELPELWCYKQLLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQL 622
+ FA+ + +FCE + L L +L L + VK AR
Sbjct: 841 AQICQGFAAGMIKFCEAMGWG-AMAAALDHFADRLKAGARADLLGLSKITFVKSRTARVF 899
Query: 623 LNAGYSSLELIARADAKEMV 642
+ G+ ++ ++A AD KE+V
Sbjct: 900 WDNGFKTVAVVANADPKELV 919
>gi|71995036|ref|NP_001022912.1| Protein HELQ-1, isoform b [Caenorhabditis elegans]
gi|351065834|emb|CCD61811.1| Protein HELQ-1, isoform b [Caenorhabditis elegans]
Length = 469
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 134/462 (29%), Positives = 236/462 (51%), Gaps = 28/462 (6%)
Query: 234 LEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYV 293
L++CIL GVAYHH+ LT ER+ +E A++ G + ++C TSTLAAGVNLP +RVII+ V
Sbjct: 5 LKQCILSGVAYHHSGLTQDERKCVEAAFMEGLIYVVCATSTLAAGVNLPVRRVIIKAPMV 64
Query: 294 GRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAG-PEPISSHMDPP 352
GR+ + Y QM GRAGR G G+ I + K ++ F M+ + P +SS
Sbjct: 65 GRERLGKAQYLQMAGRAGRAGFDTKGDCITIIKAGEEERWFREMLKSDIPRCMSSLSSEE 124
Query: 353 TLVDLILEVVAANLCSSLEDVKTLIKHTLFYQLKSPEDQQTFLETT-------------- 398
++ IL+ V L ++E++ T ++++LFY +SPE+ + +E++
Sbjct: 125 SMGSFILDCVVLKLAENIEEIMTAVRYSLFYAQESPENIRKLVESSVKRLEEHYFITIEP 184
Query: 399 LSEIVASLLASKGTMLTMNEAGHLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLL 458
L + VAS +++ + + G +S + + A AG D +++DL+ + +
Sbjct: 185 LEQDVASEPSAQASSIP-RVPGKISPSDLGNAVFNAGFDPDEATRLHADLVSSLNQGVIF 243
Query: 459 NS-LHMLFLVIPLEY--RIPSDGILLSRSKVYDRYTKFHPQTLRVAEALGVTENLVALNV 515
S H+LF++ P E I D LL Y ++ G+ E + +
Sbjct: 244 ASHFHLLFIITPYEQVCNINWDLFLL-------MYNALPSSERKLLAECGLEEKFILEAI 296
Query: 516 TGKLKDEKKALLCRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYR 575
++ R + A +L + N + VA+ +G++ LQ L + A+ + +
Sbjct: 297 ITRVDLTAGTPRMRLYIALMLQKIWNHEPMYTVAERFGVEKGWLQATLQSSISQAASIAK 356
Query: 576 FCEELPELWCYKQLLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIAR 635
F E++ +W ++LL +L Q L P L LM + G+K RA L AGY ++ +IAR
Sbjct: 357 FSEKITTMWPLRKLLPELVQRLSEAAQPELLPLMTVDGIKKARAAILFKAGYKTVGMIAR 416
Query: 636 ADAKEMVAKIRHLPLRSARNLISAAKLHFITKMDKVEAMKNL 677
A+ ++V ++ + + A ++I++A++ ++D E M+ L
Sbjct: 417 ANPLKLVQELGTIRMAQANSIIASARMVLRDQVD--EKMEEL 456
>gi|384249808|gb|EIE23289.1| hypothetical protein COCSUDRAFT_42188 [Coccomyxa subellipsoidea
C-169]
Length = 1716
Score = 200 bits (508), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 187/668 (27%), Positives = 314/668 (47%), Gaps = 78/668 (11%)
Query: 14 EEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDE 73
+E + +G G P T + +CTIEK + L+ L++E ++ + +VIDE
Sbjct: 311 KEVRGMYSNKSGAAGINPETT------GVVVCTIEKANILVNRLLEEEKMGILSCLVIDE 364
Query: 74 FHMLNEPQRGPILECVVSKVLY--------LKKSIQIFAMSATIGNINALSTFIEGITYV 125
HM+ + QRG +LE +++K+ Y + +QI MSAT+ N A +++++ Y
Sbjct: 365 LHMVGDEQRGYLLELLLTKLRYSTAGVDEVAGEGLQIIGMSATMSNAAAFASWLDAELYE 424
Query: 126 ENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYAD-NLDYSLTGSGPDAVLHL----VQGNL 180
+ RP ++V V ++ + G + ++ AD + D D V L V
Sbjct: 425 TSFRPVPLRKFVKVGCQI-RDERGDPVRKLAADPHWDRE------DHVALLARETVDAGK 477
Query: 181 MVLIFCSSKIACSNLALRLQF------DRFPGTKEYKKQEKEDLIEALKEENDGKLSTNL 234
VLIFC+SK CS++A + +RF G +E + D L +D + +L
Sbjct: 478 SVLIFCASKKKCSDVARHIAEMLGSIEERFLGGEELGDTCRADFHAELLGLSDK--NADL 535
Query: 235 EECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVG 294
+GVA+HHADL+ ER ++E+A+ +G L+++ TSTLAAGVNLPA RVII++ Y+G
Sbjct: 536 AYTFQFGVAFHHADLSHEERAIVEKAFRSGALRVLTATSTLAAGVNLPAARVIIKEWYIG 595
Query: 295 --RDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLR---FSSMMNAGPEPISSHM 349
+++ + +QM GRAGR GL ++GE+I LC ++ + + ++ G + + S +
Sbjct: 596 LESQWLTRSQIRQMAGRAGRAGLDDTGEAI-LCANPRNPRQADEIAKLIQDGHDMVDSCL 654
Query: 350 --DPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQLKSPEDQQTFLETTLSEIVASLL 407
+ +LEVVA+ ++ DVK ++ TL K D Q + ++ + SL
Sbjct: 655 IEGRKGMDRAVLEVVASKAVATKHDVKRYVQCTLLAATK---DFQEVVTKAATDALRSLQ 711
Query: 408 ASKGTMLTMNE-AGHLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFL 466
+ ++T + AG T + A V +GL L DL + CL + LH+ +L
Sbjct: 712 QQR--LITWEQKAGLWGPTLLGSAVVASGLDIQNALDYKQDLDKAREGLCLDSDLHLCYL 769
Query: 467 VIPLEYRIPSDGILLSRSKVYDRYTKFHPQTLRVAEALGV-----TENLVALNVTGKLKD 521
+ P S+ + + + +V E +GV T L+ K+ D
Sbjct: 770 ITPR-----SEDVCRNWETCCNVIRSVQGVQAKVRELVGVNMGWLTREGCHLSARAKIPD 824
Query: 522 EKK--ALLC-RFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCE 578
+ A +C RFF A +L DV++ + + + YG++ Q A + FCE
Sbjct: 825 KHSHTARVCRRFFTALVLSDVVDEVEPRVIFERYGVKRFVTQQLQEQAGKHAGMMAAFCE 884
Query: 579 ELPELWCYKQLLTDLPQTLMYCRAPNLR-----------ALMDLPGVKIGRARQLLNAGY 627
+ W ++L AP + AL ++P V AR L N G
Sbjct: 885 RMG--WRNLEMLI----AAFQAGAPPISRALAGVKQEIVALTEIPHVGPASARLLFNGGL 938
Query: 628 SSLELIAR 635
+ E IAR
Sbjct: 939 RNAETIAR 946
>gi|390336212|ref|XP_788319.3| PREDICTED: uncharacterized protein LOC583312 [Strongylocentrotus
purpuratus]
Length = 3938
Score = 199 bits (505), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 204/705 (28%), Positives = 319/705 (45%), Gaps = 103/705 (14%)
Query: 15 EFKFYLEEY---AGVK-----GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEI 66
E FYL+ AGV+ G + P L I ICTIEK + LI L++E I ++
Sbjct: 1313 EKMFYLQSMFSEAGVRVDGFMGSHSPPG-GLASTDIAICTIEKANSLINRLLEEKTIGQL 1371
Query: 67 GLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVE 126
G++V+DE HM+ + RG +LE +++K+ Y+ +AT L + +G
Sbjct: 1372 GIVVVDELHMIGDSHRGYLLELLLTKIRYV---------TATT-----LKSPGDG-DGAR 1416
Query: 127 NSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLV-----QGNLM 181
S P +E+V + K VF S S++++ + + D V L +GN
Sbjct: 1417 QSVPL--TEHVKIGKAVFDS----SMSKVREVKPPFEVK-VDEDQVFSLCLETISKGN-G 1468
Query: 182 VLIFCSSKIACSNLA---LRLQFDRFPGTKEYKKQ----------------EKEDLIEAL 222
VL+FC +K C L R ++ G + D++E L
Sbjct: 1469 VLVFCPTKNWCEKLCEMMAREIYNMHQGQVTTNQTGFVKASNMLPLKLDHASLRDVVEQL 1528
Query: 223 KEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLP 282
+ +++ L + I GV YHHA LT ER +IE A+ G L+I+ TSTL++GVNLP
Sbjct: 1529 RR-TPVSINSVLRKTIPCGVGYHHAGLTFDERDIIEGAFRHGFLKILVATSTLSSGVNLP 1587
Query: 283 AQRVIIRDSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGP 342
A+RVIIR R I YKQM+GRAGR G+ GESI++CKT + + S +M A
Sbjct: 1588 ARRVIIRSIMFNRKVIDPLTYKQMIGRAGRKGIDTEGESILVCKTTERD-KASKLMRAEL 1646
Query: 343 EPISSHMDPPTLVDL-------ILEVVAANLCSSLEDVKTLIKHTL----FYQLKSPEDQ 391
P+ S + DL ILE++A+ + SS +V+ TL ++K+ +DQ
Sbjct: 1647 PPVQSCLIKSQGDDLSNSLKRAILEIIASGVASSPTEVQAYASSTLLAASLSEVKT-DDQ 1705
Query: 392 QTFLETTLSEIVASLLASKGTMLTMNEAGHLS-------------LTSIAKAAVQAGLSH 438
+ + T S + S L NE L T + KA + + LS
Sbjct: 1706 GSGVNT------GSAVLSCVKFLEENEFIRLQNVECEGETTEKYCPTQLGKATLSSALSP 1759
Query: 439 DVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEYRIPSDGILLSRSKVYDRYTKFHPQTL 498
L ++++L + NF L N LH+L+ V P I + G + + K
Sbjct: 1760 GEALQVFAELQKARKNFVLENELHILYQVTP----IYNQGFQPDWYQFVCTWEKMSSDQR 1815
Query: 499 RVAEALGVTENLVALNVTGKLKDEKK--------ALLCRFFHACILYDVLNFDNHQKVAK 550
RVAE +GV E+ + G + + A+ RF+ IL++++N VA
Sbjct: 1816 RVAELVGVEESFLMRASQGLVSSASRSANVQKSIAIHRRFYTTLILHELVNEVPLPTVAA 1875
Query: 551 MYGIQNSHLQNFLNVTSYFASKVYRFCEELPELWCYKQLLTDLPQTLMYCRAPNLRALMD 610
Y LQ+ S F+ V FC L W + LL L + L L+
Sbjct: 1876 KYSCGFGQLQSLQQSASTFSGMVTVFCSRL-GWWNLELLLAQFKNRLNFGIQRELCDLVR 1934
Query: 611 LPGVKIGRARQLLNAGYSSLELIARADAKEMVAKIRH-LPLRSAR 654
+ + RAR L +AGY ++ +A + ++ +R+ +P +S R
Sbjct: 1935 ISLLNAQRARLLYDAGYPTVAAVATCNPDDVETLLRNSVPFKSGR 1979
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 53/90 (58%), Gaps = 9/90 (10%)
Query: 15 EFKFYLEEY---AGVK-----GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEI 66
E FYL+ AGV+ G + P L I ICTIEK + LI L++E I ++
Sbjct: 613 EKMFYLQSMFSEAGVRVDGFMGSHSPPG-GLASTDIAICTIEKANSLINRLLEEKTIGQL 671
Query: 67 GLIVIDEFHMLNEPQRGPILECVVSKVLYL 96
G++V+DE HM+ + RG +LE +++K+ Y+
Sbjct: 672 GIVVVDELHMIGDSHRGYLLELLLTKIRYV 701
>gi|328782961|ref|XP_001120279.2| PREDICTED: DNA polymerase theta [Apis mellifera]
Length = 1864
Score = 198 bits (504), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 193/647 (29%), Positives = 321/647 (49%), Gaps = 58/647 (8%)
Query: 42 IYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKK--- 98
I I TIEK + LI L++E + +G +++DE H++ +P RG +LE +++K+ Y+
Sbjct: 215 IAIATIEKANSLINHLMEEKELINLGAVIVDELHLVGDPNRGYLLELLLTKLRYMTSRDE 274
Query: 99 --SIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSFDGK-----S 151
+IQ+ MSAT+ N++ L+ +++ Y RP +E + + ++ D K S
Sbjct: 275 NINIQLIGMSATLPNLSLLAKWLDAELYKTEFRPIPLNEQCKIGRNIY---DNKLCLIRS 331
Query: 152 LTEIYADNLDYSLTGSGPDAVLHL----VQGNLMVLIFCSSKIACSNLA-------LRLQ 200
LT + +D D +LHL + VLIFCS+K C LA +L
Sbjct: 332 LTPMPELTMD-------SDDILHLCIETISDGHSVLIFCSTKNWCEKLAEQIAIAFCKLG 384
Query: 201 FDRFPGTKEYKKQEKEDLI----EALKEENDGKLSTNLEECILYGVAYHHADLTAGERRL 256
+ K + Q +LI E LK G L L+ + +G+A+HHA LT ER +
Sbjct: 385 RENTQLGKILRDQLDSELISETLEQLKRSPTG-LDNVLKNTVSFGIAFHHAGLTMDERDI 443
Query: 257 IEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRD-SYVGRDFISLNMYKQMVGRAGRTGL 315
IE ++ +G+L+++ TSTL++GVNLPA+RVIIR + G+ SL Y QM+GRAGR G
Sbjct: 444 IEGSFRSGSLRVLIATSTLSSGVNLPARRVIIRSPKFAGKLLDSLT-YHQMIGRAGRMGK 502
Query: 316 QESGESIMLCKTMQDFLRFSSMMNAGPEPISSHM-DPPTLVDLILEVVAANLCSSLEDVK 374
+GESI++CK + ++++A EPI S + D L+ +LE VA+ + + D++
Sbjct: 503 DTAGESILICKPNEQ-KSAEALISASLEPIESCLEDSAPLIRALLEAVASEVVYTPSDLE 561
Query: 375 TLIKHTLFYQLKSPEDQQTFLETTLSEIVASLLASKGTMLTMNEAGH--LSLTSIAKAAV 432
I TL L + D + ++ + L+ ++ +L E GH T+ KA +
Sbjct: 562 LYINCTLV-NLSNEYDSKDL----WNKAIKFLVDNEFLLLQKTEEGHNRWVATAFGKACL 616
Query: 433 QAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEY--RIPSDGILLSRSKVYDRY 490
A ++ L++ +L + F L LH+++LV PL +I S + + +
Sbjct: 617 AASIAPREGLLLLEELQKARRCFVLDTELHVIYLVTPLTSGNQIGS----IDWMTFLELW 672
Query: 491 TKFHPQTLRVAEALGVTENLVALNVTGKLKDEK-KALLCRFFHACILYDVLNFDNHQKVA 549
RV + +GV E + V G ++ K ++ RF+ A L+D++ V
Sbjct: 673 KMLSESERRVGQLVGVEERFLTSAVRGIVRQGKLLSIHKRFYTALALHDLVREIPLNSVC 732
Query: 550 KMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELW-CYKQLLTDLPQTLMYCRAPNLRAL 608
K YG LQ S FA + +FC++L W C + L++ L + L L
Sbjct: 733 KKYGCCRGVLQTLQQSASTFAGMITQFCKQLG--WDCMELLVSQFQTRLQFGVCRELLDL 790
Query: 609 MDLPGVKIGRARQLLNAGYSSLELIARADAKEM-VAKIRHLPLRSAR 654
+ LP + RAR L G +S+ +A A+ ++ A + LP S +
Sbjct: 791 LRLPMLNGLRARSLYKHGITSVADLAIANELDVERALYKALPFESEK 837
>gi|313243930|emb|CBY14815.1| unnamed protein product [Oikopleura dioica]
Length = 603
Score = 197 bits (501), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 130/365 (35%), Positives = 194/365 (53%), Gaps = 20/365 (5%)
Query: 1 MVHEKYQSLAKAAEEF--KFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLI 58
+V EK SL+ A E KF +EEYA G+ PP KR+ +++I TIEK S++I I
Sbjct: 197 IVQEKVASLSAIASETGQKFVVEEYAAGNGRIPPIKRR-QTPALFIATIEKASQIINCAI 255
Query: 59 QENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKK----SIQIFAMSATIGNINA 114
I V+DE HM+ E RG LE ++K+++ K S QI MSAT+ N+
Sbjct: 256 N-GEGPWISCCVVDELHMIGEGIRGARLEATLAKIMFATKQGKGSCQIIGMSATLPNLQD 314
Query: 115 LSTFIEGITYVENSRPTKHSEYVTVDKRVFQ-SFDGKSLTEIYADNLDYSLTGSGPDAVL 173
L F + + RP ++Y+ + V++ DGK L + + PD +L
Sbjct: 315 LVEFTRAELFTSDFRPIPLTQYLKLSHFVYRVEDDGKQLMTKFDRQIKPQDQKIDPDGLL 374
Query: 174 HLVQGNL---MVLIFCSSKIACSN----LALRLQFDRFPGTKEYKKQE-KEDLIEALKEE 225
LV + VLIFCSS+ C + LA +L+ + P K++ DL++ L E
Sbjct: 375 PLVLEVIPKHSVLIFCSSRRNCQSVMKLLASQLKMEMVPDDLANKREMLINDLVQEL--E 432
Query: 226 NDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQR 285
+ G + + + +G+A+HHA L+ ER IE+ + GTL ++CCTSTLAAGVNLPA+R
Sbjct: 433 SVGGVDPDFLNSLRFGIAFHHAGLSGPERATIEDGFRDGTLCVLCCTSTLAAGVNLPARR 492
Query: 286 VIIRDSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPI 345
VIIR GR + ++ Y+QM GRAGR G GE+ ++ +D R ++ P
Sbjct: 493 VIIRALTQGRSLLPISTYRQMAGRAGRAGYDTMGEAFIIAPP-KDRKRCLELVGGVMNPA 551
Query: 346 SSHMD 350
S +D
Sbjct: 552 ESKLD 556
>gi|290983714|ref|XP_002674573.1| predicted protein [Naegleria gruberi]
gi|284088164|gb|EFC41829.1| predicted protein [Naegleria gruberi]
Length = 829
Score = 196 bits (499), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 123/359 (34%), Positives = 195/359 (54%), Gaps = 38/359 (10%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+ EK ++ +++ F++E Y KG+ P + ICTIEK + ++ +LI+E
Sbjct: 214 ICEEKTTTMELISDQMNFFVEGYFASKGKIPVDP----GNQLIICTIEKANLILDNLIRE 269
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKK---------------------- 98
RI E+G +V+DE HM+ E RG +LE ++SK+LY+++
Sbjct: 270 ERIHELGCVVVDELHMIGEGGRGQLLEQLISKILYIQREKKTVEIIIDDELENTTQTKIE 329
Query: 99 --SIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIY 156
SIQ+ MSATI N+ ++ +++ + + + RP E+ + + VF +G ++ +
Sbjct: 330 NISIQLVGMSATIPNLEQIAQWMDAVLFKSDFRPVPLKEFYCIGENVFDK-EGNTVRTLT 388
Query: 157 ADNLDYSLTGSGPDAVLHL---VQGNLMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQ 213
+ + + PD + L V LIFC SK +C + L P + +Y
Sbjct: 389 SIPSEMGKGKNDPDFITSLCCEVIPAKSALIFCPSKQSCEDCVKHLTC-TLPLSNDYV-H 446
Query: 214 EKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTS 273
EK+DL+ LK G TNL I+YGV YHH+ LT+ ER+LIE AY + +ICCTS
Sbjct: 447 EKKDLVANLKL--IGTNDTNLFNGIMYGVVYHHSSLTSEERQLIENAYRNHIICVICCTS 504
Query: 274 TLAAGVNLPAQRVIIRDSYVG-RDFISLNMYKQMVGRAGRTGLQESGES-IMLCKTMQD 330
TLAAG+NLPA RVI Y+G + F++ + Y QM GR+GR G+ GES +++ + +QD
Sbjct: 505 TLAAGINLPAARVIFNTPYIGFKQFLTKSKYMQMSGRSGRAGIDSFGESYLVILQQIQD 563
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 89/192 (46%), Gaps = 30/192 (15%)
Query: 459 NSLHMLFLVIPLEYRIPSDGILLSRSKVYDRYTKF--------HPQTLRVAEALGVTENL 510
+ LH+L+++ +P DG L + Y K P ++ +G+ EN
Sbjct: 570 DDLHILYVI-----GVPIDGNGL----IEPNYVKLLNYLEQCATPLEKKIIARIGIPENA 620
Query: 511 V---ALNVTGKLKDEKKALLCRFFHACILYDVLN----FDNHQKVAKMYGIQNSHLQNFL 563
+ A+N K+ D ++ + R ++A I+ D++N F +H ++ K G+ +Q +
Sbjct: 621 ILTKAMNKYSKISDAEQYTIKRLYNAFIIRDLINERTNFIDHCEI-KGRGM----IQQLM 675
Query: 564 NVTSYFASKVYRFCEELPELWCYKQLLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLL 623
+ F S V +FCE L E W ++ + + Y ++ L+ L GVK ++L
Sbjct: 676 SQACTFCSMVQQFCETL-EFWQIAKIAKKYIRRIQYGVKSDIVDLVQLEGVKRAEIARIL 734
Query: 624 NAGYSSLELIAR 635
SLE++++
Sbjct: 735 KESSLSLEILSK 746
>gi|313221958|emb|CBY38997.1| unnamed protein product [Oikopleura dioica]
Length = 886
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 130/365 (35%), Positives = 194/365 (53%), Gaps = 20/365 (5%)
Query: 1 MVHEKYQSLAKAAEEF--KFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLI 58
+V EK SL+ A E KF +EEYA G+ PP KR+ +++I TIEK S++I I
Sbjct: 197 IVQEKVASLSAIASETGQKFVVEEYAAGNGRIPPIKRR-QTPALFIATIEKASQIINCAI 255
Query: 59 QENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKK----SIQIFAMSATIGNINA 114
I V+DE HM+ E RG LE ++K+++ K S QI MSAT+ N+
Sbjct: 256 N-GEGPWISCCVVDELHMIGEGIRGARLEATLAKIMFATKQGKGSCQIIGMSATLPNLQD 314
Query: 115 LSTFIEGITYVENSRPTKHSEYVTVDKRVFQSFD-GKSLTEIYADNLDYSLTGSGPDAVL 173
L F + + RP ++Y+ + V++ D GK L + + PD +L
Sbjct: 315 LVEFTRAELFTSDFRPIPLTQYLKLSHFVYRVEDNGKQLMTKFDRQIKPQDQKIDPDGLL 374
Query: 174 HLVQGNL---MVLIFCSSKIACSN----LALRLQFDRFPGTKEYKKQEK-EDLIEALKEE 225
LV + VLIFCSS+ C + LA +L+ + P K++ DL++ L E
Sbjct: 375 PLVLEVIPKHSVLIFCSSRRNCQSVMKLLASQLKMEMVPDDLANKREMLINDLVQEL--E 432
Query: 226 NDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQR 285
+ G + + + +G+A+HHA L+ ER IE+ + GTL ++CCTSTLAAGVNLPA+R
Sbjct: 433 SVGGVDPDFLNSLRFGIAFHHAGLSGPERATIEDGFRDGTLCVLCCTSTLAAGVNLPARR 492
Query: 286 VIIRDSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPI 345
VIIR GR + ++ Y+QM GRAGR G GE+ ++ +D R ++ P
Sbjct: 493 VIIRALTQGRSLLPISTYRQMAGRAGRAGYDTMGEAFIIAPP-KDRKRCLELVGGVMNPA 551
Query: 346 SSHMD 350
S +D
Sbjct: 552 ESKLD 556
>gi|156552095|ref|XP_001605062.1| PREDICTED: DNA polymerase theta-like [Nasonia vitripennis]
Length = 2242
Score = 195 bits (495), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 186/646 (28%), Positives = 308/646 (47%), Gaps = 52/646 (8%)
Query: 42 IYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKS-- 99
I I TIEK + L+ L+++ + +G +VIDE H+L +P RG +LE +++K+ Y+ S
Sbjct: 280 IAIATIEKANSLVNRLMEDGDLVTLGAVVIDELHLLGDPGRGYLLELLLTKLRYMTLSVE 339
Query: 100 ---IQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIY 156
IQ+ MSAT+ N+ ++ +++ Y + RP +E Q G SL +
Sbjct: 340 EVDIQLIGMSATLPNLPLIADWLDAELYKTDFRPIPLNE---------QCKFGSSLLDA- 389
Query: 157 ADNLDYSLTGSGPDAV----------LHLVQGNLMVLIFCSSKIACSNLALRLQF----- 201
N+ L PD V + + G LIFC +K C LA++L
Sbjct: 390 KKNIIRELQ-PAPDIVNDTDNIIQLCIETINGGHGTLIFCPTKNWCEKLAIQLATTFFQL 448
Query: 202 --DRFPGTKEYKKQ-EKEDLIEALKEENDGK--LSTNLEECILYGVAYHHADLTAGERRL 256
D P + +K E E L E L + L + L + + YGVA+HHA LT ER +
Sbjct: 449 GRDNTPHGQILRKNIELESLQEVLLQLKSCPVGLDSVLRKTVSYGVAFHHAGLTMDERDI 508
Query: 257 IEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGRDFISLNMYKQMVGRAGRTGLQ 316
IE + G+L+++ TSTL++GVNLPA+RVIIR + Y+QM+GRAGR G
Sbjct: 509 IEGGFRVGSLKVLIATSTLSSGVNLPARRVIIRSPMFNGKPLDKLTYQQMIGRAGRMGKD 568
Query: 317 ESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMD-PPTLVDLILEVVAANLCSSLEDVKT 375
GESI++CK + +++M + +PI S ++ L+ +LE VA+ + + E +
Sbjct: 569 TEGESILVCKP-NERQAATTLMTSSLDPIVSCLEGSGPLIRALLEAVASQVVRTPEHLDF 627
Query: 376 LIKHTLFYQLKSPEDQQTFLETTLSEIVASLLASKGTMLTMNEAGHLSL--TSIAKAAVQ 433
K T Y+ + E ++ + E V L+A++ ++ +E + T + KA +
Sbjct: 628 YSKCTFVYKCEESE-----VKEMVDEAVKFLIANEFLLVKDSEEKEKRMVATCLGKACLS 682
Query: 434 AGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEYRIPSDGILLSRSKVYDRYTKF 493
A + L ++ +L + F L LH+++LV P + S + + +
Sbjct: 683 ASIPPREGLFLFEELQRARKCFVLDTELHVIYLVTP--FNSGSQINQIDWMIFLELWRAL 740
Query: 494 HPQTLRVAEALGVTENLVALNVTGKLKDEKK-ALLCRFFHACILYDVLNFDNHQKVAKMY 552
RV + +GV E + ++ G +K K + RFF A L+D++ V K Y
Sbjct: 741 SESERRVGQLVGVDERFLMTSMRGIVKAGKPLNIHRRFFTAMALHDLVREVPLNTVCKKY 800
Query: 553 GIQNSHLQNFLNVTSYFASKVYRFCEELPELW-CYKQLLTDLPQTLMYCRAPNLRALMDL 611
LQ+ ++ FA V FC+EL W C + L L + +L L+ L
Sbjct: 801 NCCRGLLQSLQQSSATFAGMVTNFCKELK--WDCMELLFAQFQARLQFGVCRDLLDLLRL 858
Query: 612 PGVKIGRARQLLNAGYSSLELIARADAKEMVAKI-RHLPLRSARNL 656
P + RAR L G ++ +A A+ E+ + + LP S ++
Sbjct: 859 PSLNGLRARSLFKHGITTAAELAVANEIEVEEALNKALPFESEKDF 904
>gi|168021285|ref|XP_001763172.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162685655|gb|EDQ72049.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1573
Score = 194 bits (494), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 195/752 (25%), Positives = 303/752 (40%), Gaps = 170/752 (22%)
Query: 41 SIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLN-------EPQRGPILECVVSKV 93
S+ +CTIEK + L+ L++E R+ EI +IVIDE HM PIL V SK+
Sbjct: 768 SVAVCTIEKANSLVNKLLEEGRLSEISMIVIDELHMATCRTVRSFAFSDSPILRLVDSKL 827
Query: 94 LY---------------------------------------------LKKSIQIFAMSAT 108
L +QI MSAT
Sbjct: 828 LKRWGYVGDKDRGYLLELLLTKLRYAAGCGDLTSDFSAEGWTNSNIKWSTELQIVGMSAT 887
Query: 109 IGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSG 168
+ N++ ++ +++ Y RP E++ V +F KS+ + D L G
Sbjct: 888 MPNVSEVAKWLQAALYQTEFRPIPLEEFMKVGNTIFD----KSMEIVRMIRDDADLGGKD 943
Query: 169 PDAVLHL----VQGNLMVLIFCSSKIACSNLALRLQFDRFPGTKEYKK-----QEKEDLI 219
PD ++ L V VL+FCSS+ C A + P KK ++ +
Sbjct: 944 PDHIIELCHEVVSEGHSVLVFCSSRKGCETSARHIA-KHLPPFSVIKKNSDGPEDGNAAV 1002
Query: 220 EALKEENDGKLSTNLEECILYGVAYHHADLT---------------AGERRLIEEAYLAG 264
E L+ + G L L + + GVAYHHA LT A E+ +IE + +G
Sbjct: 1003 EELRRCSAG-LDPVLADTVPAGVAYHHAGLTVLSSPCSFISNARPVAEEKDVIETCFKSG 1061
Query: 265 TLQIICCTSTLAAGVNLPAQRVIIRDSYVGRDFISLNMYKQMVGRAGRTGLQESGES--- 321
++++ TSTLAAGVNLPA+RVI R +GRDF+ Y+QM GRAGR G+ GES
Sbjct: 1062 VVRVLVATSTLAAGVNLPARRVIFRQPKIGRDFVDTTRYRQMAGRAGRAGIDTKGESKFS 1121
Query: 322 -----------------------------IMLCKTMQDFLRFSSMMNAGPEPISSHM--D 350
I++CK ++ R MM + + S + D
Sbjct: 1122 NFVTHVGESYVGGCLISYRWWATPVNMQQILICKP-EEAKRIMEMMKQDCKALQSCLADD 1180
Query: 351 PPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQLKSPEDQQTFLETTLSEIVASLLASK 410
++ +LEVVA+ + + DV+ ++ TL + E+ + +L L K
Sbjct: 1181 KNGMMRALLEVVASGMVKTAADVQRYVRCTLLNATQPFEEVVKAAQDSL-----RWLCHK 1235
Query: 411 GTMLTMNEAGHLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPL 470
+ A ++T + +AA + LS + L+++ DL + F L + LH+++ V P
Sbjct: 1236 HLVEWDKNAEIYNITPLGRAAFSSSLSPEESLVVFEDLAKAREGFVLASDLHLIYEVTPT 1295
Query: 471 EYRI-PSDGILLSRSKVYDRYTKFHPQTLRVAEALGVTENLV------------------ 511
+ P G+ Y RY + P V +GV E +
Sbjct: 1296 YVDLEPDWGVF------YQRYMELSPIDQAVGSRVGVLEAFLLRMAHGAPILQHRTGVRS 1349
Query: 512 --ALNVTGKL---------KDEKKALL--------CRFFH-ACILYDVLNFDNHQKVAKM 551
+V GK+ K A L C+ FH A IL ++ ++ +
Sbjct: 1350 RGGKDVKGKVSPLAQKSRWKSPNGAQLPVDQLLRICKRFHVALILSYLVQEVPMMEICER 1409
Query: 552 YGIQNSHLQNFLNVTSYFASKVYRFCEELPELWCYKQLLTD-LPQTLMYCRAPNLRALMD 610
+ +Q +Q FA V FCE L W L D + + + + L +
Sbjct: 1410 FKVQKGVVQGLQESAGRFAGMVAAFCERLG--WSDMGTLVDKFQKRVSFGVKSEIVELTE 1467
Query: 611 LPGVKIGRARQLLNAGYSSLELIARADAKEMV 642
+P VK RAR L AG S+ +A A E+V
Sbjct: 1468 IPFVKAARARALFKAGLKSIHAVAEATVDELV 1499
>gi|258565945|ref|XP_002583717.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237907418|gb|EEP81819.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 855
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 177/686 (25%), Positives = 297/686 (43%), Gaps = 99/686 (14%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSK-------- 52
+V EK + L + E + + + V G YP + + + S+ I GSK
Sbjct: 206 LVQEKMKWLRRLVEGVEKRVNVPSQVDGAYPSRAKSV-QNSVRITGFFGGSKSRATWSDT 264
Query: 53 ------LIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMS 106
L+ + I+E ++DE+G++V+DE HML++ RG ++E ++SK++ L++ QI MS
Sbjct: 265 DIAANMLVNTAIEECKVDELGIVVLDELHMLDDEHRGYLIEIMISKLMLLQQDTQIVGMS 324
Query: 107 ATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSFDGKSL----------TE-- 154
AT+ N L+ ++ Y+ +P E++ ++ S K TE
Sbjct: 325 ATLSNTELLAKWLHANYYISKYQPIPIQEFLVYKNLIYTSGSSKEFLRTVVSLEKSTEPQ 384
Query: 155 ---IYADNLDYS--------LTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRLQFDR 203
I +D S +T + L V L+FC S+ +C + AL + D
Sbjct: 385 CESIAVKAIDISRYKELGNPITNAMVSLALETVTSGYGALVFCGSRQSCHSNALLIS-DA 443
Query: 204 FPGTKEYKK---QEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEA 260
P +++ DLI L+ + G L E+ I+ GVA+HHA LTA ER LI E
Sbjct: 444 MPDETMLDSDVLEKRGDLIAGLRSLSCG-LDPVFEKTIIKGVAFHHAGLTAEERDLIAEG 502
Query: 261 YLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGRDFISLNMYKQMVGRAGRTGLQESGE 320
Y G L+++ T +LAAG+NLPA+RVI+ + +GR+ + M R ++G Q +
Sbjct: 503 YDKGILKVLVATCSLAAGINLPARRVILCGARMGRELVGPAMLYSTNAR--KSGAQGA-- 558
Query: 321 SIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHT 380
ILE VA L S E + ++ +
Sbjct: 559 -------------------------------------ILEAVATRLVSGKEAINDYVRCS 581
Query: 381 LFYQLKSPEDQQTFLETTLSEIVASLLASKGTMLTMNEAGHLSLTSIAKAAVQAGLSHDV 440
L Y + +E+TL+E+V +L G T + +A V + S +
Sbjct: 582 LLYHTMEEGELFAMVESTLTELV------NDNLLNPRIDGSYEPTQLGQAIVASAFSPEE 635
Query: 441 CLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEYRIPSDGILLSRSKVYDRYTKFHPQTLRV 500
+ I+ +L F + +H+ ++ PL+ D ++ SK D + LRV
Sbjct: 636 GMFIHDELKRALQAFVMDGEMHVFYMFAPLQSAANVD---INWSKFLDELDRLDESGLRV 692
Query: 501 AEALGVTENLVALNVTGK--LKDEKKALLC-RFFHACILYDVLNFDNHQKVAKMYGIQNS 557
+ +GV V G+ +KD AL+ R + A L D+ N V+ Y
Sbjct: 693 LQFIGVDPGFVNSMAQGRSAIKDPTLALIYQRAYTAFQLRDLSNEIPVSIVSHKYSTPRG 752
Query: 558 HLQNFLNVTSYFASKVYRFCEELPELWCYKQLLTD-LPQTLMYCRAPNLRALMDLPGVKI 616
++QN FA+ + +FC+ + W ++ D + L +L L + VK
Sbjct: 753 NVQNLSQTCHGFAAGMVKFCKRMG--WDMLAVVLDHMRDRLQAGARADLLELAQVTFVKS 810
Query: 617 GRARQLLNAGYSSLELIARADAKEMV 642
AR G+ +L +A ADAK++V
Sbjct: 811 RTARLFWENGFKTLRALAEADAKDLV 836
>gi|412990681|emb|CCO18053.1| predicted protein [Bathycoccus prasinos]
Length = 1828
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 188/723 (26%), Positives = 319/723 (44%), Gaps = 112/723 (15%)
Query: 20 LEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNE 79
L + G G P K + + +CT EK + L+ +I+++R+ ++ +V+DE HM+ E
Sbjct: 244 LRHFGGSGGGIP--KSGTGQTYLIVCTPEKANALVTKMIEQHRLKDLKCVVVDELHMVQE 301
Query: 80 PQRGPILECVVSKVLYL------------------------------------------- 96
P RG LEC+++K++Y
Sbjct: 302 PGRGATLECLLTKLVYATEENGSGAPGDAANTNTVLGDVSQYSSSDGGYSIFSPPSKEGE 361
Query: 97 -----KKSIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSFDGKS 151
++ IQI MSAT+ N+NAL+ +++ + N RP +V + S G+
Sbjct: 362 NTMNNQRPIQIVGMSATLPNVNALAEWLDASCSISNYRPVTLEVFVKSRNNIIDSASGEV 421
Query: 152 LTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRLQFDRF------- 204
+ + N D G + +Q N VL+FC ++ C LA +L +F
Sbjct: 422 VRTLEQGN-DVVHVGK---LCMETLQENGQVLVFCGTRDKCRVLADQLAKMKFVDVNLGI 477
Query: 205 PGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAG 264
+ E ++Q D + + + DG +S N+ + I+ G+A+HHA + ER+ IE AY G
Sbjct: 478 GNSVEAREQFAYDALP--RNDKDGSIS-NIAKYIISGIAFHHAGMQVEERQAIEVAYKRG 534
Query: 265 TLQIICCTSTLAAGVNLPAQRVIIRDSYV-GRDFISLNMYKQMVGRAGRTGLQESGESIM 323
++I+C TSTLAAGVN+PA+RVI+RD V G + +QM+GRAGR GL + G + +
Sbjct: 535 LVRIVCATSTLAAGVNMPARRVIVRDLLVGGTQKLEPRNLQQMIGRAGRAGLDDRGSAYV 594
Query: 324 LC------KTMQDFLRFSSMMNAGPEP-ISSHMDPPTLVDLILEVVAANLCSSLEDVKTL 376
K ++ + M G P + S + + ++LE A+ L +VK
Sbjct: 595 FVGQDVPEKVLEKKIEEVRDMLEGDLPELESALAQAGMRRVMLEGCASGLVRHAREVKRY 654
Query: 377 IKHTLFYQLKSPEDQQTFLETTLSEIVASLLASKGTMLTMNEAGHLSLTSIAKAAVQAGL 436
+ TL L +D ++++ E + L + + + S +++ AA Q+G+
Sbjct: 655 AQKTLLSALNDFDD---YVQSIAVEAL-KWLQDEALLKWCPKTHTYSASNLGNAAAQSGM 710
Query: 437 SH-DVCLIIYSDLLHNKLNFCLLNSLHMLFLVIP-LEYR----IPSDGILLSR------- 483
+ + DLL + L LH+LFL+ P L++R + +G ++ +
Sbjct: 711 VKVESIRRVEQDLLLARKALVLATPLHLLFLITPTLDWREEEIVQKNGKVIKKMVPPNPL 770
Query: 484 ----SKVY-DRYTKFHPQTLRVAEALGVTENLVALNV-TGKL---KDEKKA---LLC-RF 530
K + D Y+ P V E +G+ V + GK+ +DE A LLC RF
Sbjct: 771 PPLNQKFFMDLYSNLDPLQKSVLEMVGIDRAYVESRLQQGKMDNPRDENHARQRLLCIRF 830
Query: 531 FHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELWCYKQLL 590
+A IL D++ + K Y I L+ + V C ++ Q L
Sbjct: 831 INALILLDLVEEVKVDHICKKYSITGHTLKKLQEESVRLGFTVSSVC-----VYMRWQDL 885
Query: 591 TDL----PQTLMYCRAPNLRALMDLPG-VKIGRARQLLNAGYSSLELIARADAKEMVAKI 645
DL + LM ++ L + + + RAR LL+AG S + + K + I
Sbjct: 886 GDLVNRAAERLMVGGREDILPLTCVGDCIDVTRARALLDAGMKSPKDVVGFGVKRVQKAI 945
Query: 646 RHL 648
+ L
Sbjct: 946 KRL 948
>gi|159486913|ref|XP_001701481.1| DNA polymerase theta [Chlamydomonas reinhardtii]
gi|158271663|gb|EDO97478.1| DNA polymerase theta [Chlamydomonas reinhardtii]
Length = 2508
Score = 192 bits (489), Expect = 3e-46, Method: Composition-based stats.
Identities = 177/665 (26%), Positives = 286/665 (43%), Gaps = 130/665 (19%)
Query: 44 ICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIF 103
+ TIEK + L+ ++++E + E+ +++DE HM +
Sbjct: 960 VATIEKANMLVNAMLEEETLGELSAVIVDELHM-------------------------VI 994
Query: 104 AMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYS 163
MSAT+ N++ ++ +++ Y+ + RP + EYV V +R+ G + E+ D
Sbjct: 995 GMSATMPNVDVVARWLDAALYITDFRPVQLQEYVKVGRRIMDG-SGALVRELAPDK---G 1050
Query: 164 LTGSGPDAVLHLVQGNLM----VLIFCSSKIACSNLA---LRL----QFDRFPG------ 206
D V L Q + VLIFC+SK C +A RL Q D P
Sbjct: 1051 WEDKDTDHVALLTQETVREGHSVLIFCASKFWCEKVAEHVARLVAIAQRDPPPNAAAAAG 1110
Query: 207 -------TKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEE 259
+ + ++ ++ L+ + G L + + GVAYHHA L+ ER LIE
Sbjct: 1111 KDPDGGVSPAAARNARDTYVQELRRLSGG--DPTLPDLVARGVAYHHAGLSNEERDLIEA 1168
Query: 260 AYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGR--DFISLNMYKQMVGRAGRTGLQE 317
AY AG + ++ TSTLAAGVNLPA+RVI R +Y+G+ + I Y+QM GRAGR G+
Sbjct: 1169 AYKAGAISVLTATSTLAAGVNLPARRVIFRHTYIGKQDNPIDATKYRQMSGRAGRAGIDT 1228
Query: 318 SGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPT--LVDLILEVVAANLCSSLEDVKT 375
+GES ++C+ + ++M PI+S + + +LEVVA+ SS DVK
Sbjct: 1229 AGESFIICEKNRPVAPLLALMQQKANPIASCLTEARKGMKRAVLEVVASGAVSSGTDVKR 1288
Query: 376 LIKHTLFYQLKSPEDQQTFLETTLSEIVASLLASKGTMLTMNEAG-HLSLTSIAKAAVQA 434
I TL + Q F + I A + ++EA + T KA + +
Sbjct: 1289 FIACTLIHA------QHGFGAVAKATIAALHWLKDNGFIRVDEATLNWGPTPFGKATLAS 1342
Query: 435 GLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEYRIPSDGILLSRSKVYDRYTKFH 494
+ + L++ +DL +++ L LH+ +LV P++ + D + + + K
Sbjct: 1343 SMPPEEALVVRADLERARMSLVLATDLHVTYLVTPIKEDLRVDWEIY-----FHWFEKLS 1397
Query: 495 PQTLRVAEALGVTENLVALNVTGKLKDEKKALLCRFFHACILYDVLNFDNHQKVAKMYGI 554
RVAE LV L ++VA+ YG+
Sbjct: 1398 KVDARVAE-------LVPL--------------------------------KEVAEKYGL 1418
Query: 555 --QNSHLQNFLNVTSYFASKVYRFCEELPELWCYKQLLTDLPQT-LMYCRAPNLRALMDL 611
+ L+ F++ V FCE L W +++ Q+ + Y P + AL ++
Sbjct: 1419 GKEKGPLEGLQERAGRFSAMVAAFCERLG--WSDMEVIIAKFQSRVWYGVRPEVVALTEI 1476
Query: 612 PGVKIGRARQLLNAGYSSLELIAR---------------ADAKEMVAKIRHLPLRSARNL 656
P VK RAR L AG E +A A E + R R+AR +
Sbjct: 1477 PYVKGHRARLLFKAGLRMPEAVAACEFDRLLEILSAGGGAKNPEQEEQQRKTERRAARMI 1536
Query: 657 ISAAK 661
+ AK
Sbjct: 1537 LQGAK 1541
>gi|400602952|gb|EJP70550.1| DEAD/DEAH box helicase [Beauveria bassiana ARSEF 2860]
Length = 932
Score = 192 bits (488), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 173/653 (26%), Positives = 302/653 (46%), Gaps = 62/653 (9%)
Query: 42 IYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQ 101
I +CT+EK + LI + I++ + ++ +V+DE HM+++ RG LE + +K+L L+ ++Q
Sbjct: 249 IGVCTLEKANMLINTAIEDCSVAKLQAVVLDELHMVDDEHRGYTLELIATKLLSLEHTVQ 308
Query: 102 IFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYA---D 158
I MSATI N++ ++ ++ ++ RP E++ + VF + + L + + +
Sbjct: 309 IVGMSATIPNMDLMAKWLNAHSFETRYRPVPIEEHLVCNGAVFAADNPLGLPDTISQLQN 368
Query: 159 NLDYSLTGSGP-------DAVLHLV--------QGNLMVLIFCSSKIACSNLALRLQFDR 203
+ ++ P D VL+ V VL+F S+ ++A R
Sbjct: 369 GVVKAIRTIAPSSHKELSDPVLNAVVTLAHETASAGYGVLVFAGSRGMTESVA-RCISRV 427
Query: 204 FPGTKEYKK---QEKEDLIEALKEENDGKLSTNLEECILYGVAYHH-------------- 246
P E + +++ DL++ L+ G L LEE +L+GVA+H
Sbjct: 428 MPDISEIHETILEKRIDLLDELRSLPTG-LDHILEETVLFGVAFHRMSSSDFIPCLANFP 486
Query: 247 --ADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGRDFISLNMYK 304
A +TA ER LI AY +GTL + T +LAAG+NLPA+RVI+ ++ +GRDF+ M +
Sbjct: 487 LDAGITAEERDLIAAAYDSGTLLVCVATCSLAAGINLPARRVILHNARMGRDFVGPAMLR 546
Query: 305 QMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAG-PEPISSHMDPPTLVD-LILEVV 362
QM GRAGR G GE+ + C+ D ++ A P+ +S V +LEV+
Sbjct: 547 QMRGRAGRQGKSPIGETYLCCRE-ADLEPVVQLIKAELPKVMSCLTSENRRVQRAVLEVI 605
Query: 363 AANLCSSLEDVKTLIKHTLFYQLKSPEDQQTFLETTLSEIVASLLASKGTMLTMNEA-GH 421
A L +S + ++ FY KS L ++ ASL +G L ++A G+
Sbjct: 606 AVRLATSYDSIR-------FYFAKSLLALTQDLSRVDDDLKASLKDLEGLELIESDAFGN 658
Query: 422 LSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEYRIPSDGILL 481
+ T + +A V + + D + ++ +L+ F + LH+L++ P++ GI +
Sbjct: 659 YAPTQLGRAIVASAIDPDDGIFVHRELVKALRAFVMDGELHILYVFTPVQ----DLGITV 714
Query: 482 SRSKVYDRYTKFHPQTLRVAEALGVTENLV-----ALNVTGKLKDEKKA--LLCRFFHAC 534
+ + LRV L + + + V +EK+ + RF+ A
Sbjct: 715 NWQVFRNELQLLDDSGLRVLRFLAIKPTAILKFAQGVPVPKNTPEEKEMSRVYKRFYLAL 774
Query: 535 ILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELWCYKQLLTDLP 594
L D+ N VA+ Y +Q FA+ V +FC+ + + L
Sbjct: 775 QLRDLCNEMPVHIVARKYDAPRGSVQTLSQTCHGFAAGVIKFCQFM-DWGLMAAALDHFS 833
Query: 595 QTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIARADAKEMVAKIRH 647
L+ L +L +P +K AR G+ ++ IA AD KE+V ++
Sbjct: 834 DRLLAGARTELLSLAKIPFIKSRTARVFWENGFRTVGTIANADPKELVPILKQ 886
>gi|288932505|ref|YP_003436565.1| DEAD/DEAH box helicase [Ferroglobus placidus DSM 10642]
gi|288894753|gb|ADC66290.1| DEAD/DEAH box helicase domain protein [Ferroglobus placidus DSM
10642]
Length = 688
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 183/645 (28%), Positives = 291/645 (45%), Gaps = 83/645 (12%)
Query: 10 AKAAEEFK-FYLEEYAGVK-----GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRI 63
A A E+F+ F E GVK G Y L + I + T EK L+ + + + +
Sbjct: 81 ALAGEKFEEFSKWEEIGVKIGISTGDYESRDEWLGECDIVVTTSEKADSLLRN--EASWL 138
Query: 64 DEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGIT 123
+ L+V+DE H+++ +RG LE +++K+ L +++I A+SATI N + ++ ++
Sbjct: 139 RNLSLLVVDEIHLIDSAKRGATLEVLIAKLKKLNPNLRIIALSATIPNADEIAEWLNAEL 198
Query: 124 YVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVL 183
RPT EYV R+ + F+ L E+ A++ S ++ ++ VL
Sbjct: 199 IKSEWRPTPLYEYVFYPGRLLK-FENGFLREVKAES-------SIERLIVRTLEEGGQVL 250
Query: 184 IFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVA 243
+F S++ + A+++ TKE+ ++ D+ E + EEN+G++S L EC+ G A
Sbjct: 251 VFESTRRNAESYAVKIS----GYTKEFV-EDNSDVAEKVLEENEGEMSRKLSECVKLGSA 305
Query: 244 YHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGRDF-----I 298
+HHA L +R IE+A+ G ++++ T TLAAGVNLPA+RVI++ SY D I
Sbjct: 306 FHHAGLLNSQRVAIEKAFREGRIKVLVATPTLAAGVNLPARRVILK-SYRRYDSGAYAPI 364
Query: 299 SLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAG-PEPISSHMDPPTLVDL 357
++ YKQM GRAGR GL E GE+I++ KT + L+ + AG PE + S + T +
Sbjct: 365 MVSEYKQMAGRAGRPGLDEYGEAIIVTKTRDEALKVAERYLAGEPEKVISKLGSETHLRF 424
Query: 358 -ILEVVAANLCSSLEDVKTLIKHTLF-YQLKSPEDQQTFLETTLSEIVASLLASKGTMLT 415
L +++ + SS ED+ T F YQ + LE + IV L K M+
Sbjct: 425 HTLSLISEGIASSFEDLLDFYSTTFFAYQ------NEFTLEWEIRRIVLQL--EKWGMIV 476
Query: 416 MNEAGHLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEYRIP 475
+ TS K + + I +L F L+ L ML L+ R P
Sbjct: 477 -----EYAPTSFGKLVSKLYIDPLSGFIFKEEL----SKFDELSDLAMLHLIC----RTP 523
Query: 476 ---------SDGILLSRSKVYDRYTKFHPQTLRVAEALGVTENLVALNVTGKLKDEKKAL 526
+DG + + + ++P E
Sbjct: 524 DMELLSIRKADGWIENELENLREELTYYPSIYSA---------------------EYDFF 562
Query: 527 LCRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELWCY 586
L F A LYD +N + + + YGI L+ + + + R E L
Sbjct: 563 LREFKTALCLYDWINERDEDIICEKYGIAPGDLRRIVETAEWLMHSLRRIAEHLSHNLAS 622
Query: 587 KQLLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLE 631
K L L L Y L L+ L V RAR+L NAG +LE
Sbjct: 623 KAL--KLEMRLKYGVKEELLDLVKLKNVGRKRARKLYNAGIRNLE 665
>gi|384249601|gb|EIE23082.1| P-loop containing nucleoside triphosphate hydrolase protein,
partial [Coccomyxa subellipsoidea C-169]
Length = 398
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 117/309 (37%), Positives = 170/309 (55%), Gaps = 23/309 (7%)
Query: 33 TKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSK 92
T Q + I +CTIEK + I L+ E+R+DE+ +V+DE HMLN+ RGP LE ++K
Sbjct: 96 TPLQPGSEPIAVCTIEKANVAINRLVMEDRLDELCCVVVDEVHMLNDQHRGPSLELAITK 155
Query: 93 VLYLK--KSIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSFDG- 149
+L+ K +IQI MSAT+G ++ALS ++ ++ N RP +EY VF
Sbjct: 156 ILHSKHAPAIQIVGMSATMGGVDALSKWLSCRLFLTNFRPVSLTEYAVFQGNVFSKGKAG 215
Query: 150 -------KSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRLQFD 202
+ L + A + D L P A +V VL+FC+S+ C + A L +
Sbjct: 216 EDELVPVRQLADSDARDRDLLL----PLAA-EVVAEAGSVLVFCASRKQCQSCAEMLA-N 269
Query: 203 RFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYL 262
P + +++L +A++ G LE + GVA+HHA LT ER +E Y
Sbjct: 270 LLPSHIPAIAEVQDELAQAMRGAMGGYADATLERLMRAGVAWHHAGLTLEERAHVEAGYR 329
Query: 263 AGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGRD-FI------SLNMYKQMVGRAGRTGL 315
AGT++++C TSTLAAG+NLPA+RVI+R + R FI S Y QMVGRAGR G
Sbjct: 330 AGTIRVLCATSTLAAGINLPARRVILRSLWQARSPFISGPGPVSRAQYLQMVGRAGRAGY 389
Query: 316 QESGESIML 324
E+GES ++
Sbjct: 390 AEAGESYII 398
>gi|149242937|pdb|2P6R|A Chain A, Crystal Structure Of Superfamily 2 Helicase Hel308 In
Complex With Unwound Dna
gi|149242942|pdb|2P6U|A Chain A, Apo Structure Of The Hel308 Superfamily 2 Helicase
Length = 702
Score = 189 bits (480), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 173/649 (26%), Positives = 296/649 (45%), Gaps = 81/649 (12%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVK-----GQYPPTKRQLNKKSIYICTIEKGSKLIG 55
+ EKY+S K E G++ G Y L I + T EK LI
Sbjct: 80 LAGEKYESFKKW---------EKIGLRIGISTGDYESRDEHLGDCDIIVTTSEKADSLIR 130
Query: 56 SLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINAL 115
+ + + I + +V+DE H+L+ +RG LE +V+K+ + K++++ +SAT N+ +
Sbjct: 131 N--RASWIKAVSCLVVDEIHLLDSEKRGATLEILVTKMRRMNKALRVIGLSATAPNVTEI 188
Query: 116 STFIEGITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHL 175
+ +++ YV + RP E V + + FDG T S + V
Sbjct: 189 AEWLDADYYVSDWRPVPLVEGVLCEG-TLELFDGAFST---------SRRVKFEELVEEC 238
Query: 176 VQGNLMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLE 235
V N VL+F S++ A++L T +Y E E L +A+ EEN+G++S L
Sbjct: 239 VAENGGVLVFESTRRGAEKTAVKLS----AITAKY--VENEGLEKAILEENEGEMSRKLA 292
Query: 236 ECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIR-----D 290
EC+ G A+HHA L G+RR++E+A+ G ++++ T TLAAGVNLPA+RVI+R D
Sbjct: 293 ECVRKGAAFHHAGLLNGQRRVVEDAFRRGNIKVVVATPTLAAGVNLPARRVIVRSLYRFD 352
Query: 291 SYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMD 350
Y R I ++ YKQM GRAGR G+ E GE+I++ + + PE I+S +
Sbjct: 353 GYSKR--IKVSEYKQMAGRAGRPGMDERGEAIIIVGKRDREIAVKRYIFGEPERITSKLG 410
Query: 351 PPTLVDL-ILEVVAANLCSSLEDVKTLIKHTLFYQLKSPEDQQTFLETTLS---EIVASL 406
T + L ++ +LE+++ T F++ E +LS E V
Sbjct: 411 VETHLRFHSLSIICDGYAKTLEELEDFFADTFFFKQN---------EISLSYELERVVRQ 461
Query: 407 LASKGTMLTMNEAGHLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFL 466
L + G ++ EA HL+ T + + V + I+ D+L +++ + +LH++
Sbjct: 462 LENWGMVV---EAAHLAPTKLG-SLVSRLYIDPLTGFIFHDVL-SRMELSDIGALHLIC- 515
Query: 467 VIPLEYRIPSDGILLSRSKVYDRYTKFHPQTLRVAEALGVTENLVALNVTGKLKDEKKAL 526
R P + R V + + R+ + L + ++ L + K A
Sbjct: 516 ------RTPD----MERLTVRKTDSWVEEEAFRLRKELSYYPSDFSVEYDWFLSEVKTA- 564
Query: 527 LCRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELWCY 586
LC L D + + ++ YGI L+ + + ++ + R EE+
Sbjct: 565 LC-------LKDWIEEKDEDEICAKYGIAPGDLRRIVETAEWLSNAMNRIAEEVG----- 612
Query: 587 KQLLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIAR 635
++ L + + + L L+ + + RAR+L NAG + E I R
Sbjct: 613 NTSVSGLTERIKHGVKEELLELVRIRHIGRVRARKLYNAGIRNAEDIVR 661
>gi|256082460|ref|XP_002577474.1| DNA polymerase theta [Schistosoma mansoni]
Length = 1257
Score = 189 bits (480), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 143/430 (33%), Positives = 217/430 (50%), Gaps = 51/430 (11%)
Query: 28 GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILE 87
G PP L+ ++ +CTIEK + L+ LI+E R+DE+G++V+DE H++ + RG +LE
Sbjct: 116 GHSPPGG--LSAINVAVCTIEKANSLVNRLIEEERLDELGIVVVDELHLIGDTHRGYLLE 173
Query: 88 CVVSKVLYLKK--SIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQ 145
+++K+L+ + IQI MSAT+ N+ +L +++ Y+ N RP +E++
Sbjct: 174 LLLTKLLFYSRPYGIQIVGMSATLPNLKSLGQWLDAEVYITNFRPVPLTEFIL------- 226
Query: 146 SFDGKSLTEIY---------ADNL--------DYSLTGSGPDAVLHLVQGNLM----VLI 184
S D +S T + ADNL D L D V L L+ VL+
Sbjct: 227 SCDARSKTNQFYKIVKSAKPADNLPLDPQLTSDTELNMVDEDGVFALCFDTLLNGHGVLV 286
Query: 185 FCSSKIACSNLALRLQFDRFP------GTKEYKKQEKEDLIEALKE--ENDGKLSTNLEE 236
FC +K C LA + D P GT+ + ++ L+ + + L T L
Sbjct: 287 FCPTKQWCEQLADSMAHD--PSVHSNIGTRLALQLDRSGLVTCVDQLKRCPAGLDTILAR 344
Query: 237 CILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGRD 296
C+ YGVA+HHA LT ER +IE + G ++I+ TSTL++GVNLPA+RVIIR
Sbjct: 345 CLGYGVAFHHAGLTVEEREIIEFGFRKGLIRILIATSTLSSGVNLPARRVIIRTPLFHGK 404
Query: 297 FISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISS----HMDPP 352
+ YKQM GRAGR G+ SG+SI+LCK +D R ++ G P++S H P
Sbjct: 405 VLDFLTYKQMSGRAGRQGVDTSGQSILLCKP-KDLGRVRQLIMNGMPPVNSCLMGHGGSP 463
Query: 353 --TLVDLILEVVAANLCSSLEDVKTLIKHTLFYQLKSPEDQQTF--LETTLSEIVASLLA 408
+L +LEV+ +L D + TL + E F ++T SL
Sbjct: 464 ESSLKRALLEVIVNGFVETLSDALLYLSSTLLATTVTWEKLNEFNNSQSTKGNRRRSLRL 523
Query: 409 SKGTMLTMNE 418
S+ T + NE
Sbjct: 524 SQPTTYSENE 533
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 137/299 (45%), Gaps = 28/299 (9%)
Query: 373 VKTLIKHTLFYQLKSPEDQQTFLETTLSEIVASLLASKGTMLTMNEAGHLSLTSIAKAAV 432
+K L KH Y DQ T + + I S + S+ +++N A L T++ +A +
Sbjct: 556 IKDLQKHEFIYI-----DQSTCPNVSKNVINMSFVDSQSLEVSLNGA-RLQPTALGRAVL 609
Query: 433 QAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEYRIPSDGILLSRSKVYDRYTK 492
+ L LI+Y +L + + L LH+++L+ P+ + +D L ++Y
Sbjct: 610 SSSLGPIHGLIVYEELDRARRSIALDTELHLVYLLTPVYLDVGAD---LDWLCYLEQYQS 666
Query: 493 FHPQTLRVAEALGVTENLVALNVTG------------KLKDEKKALLCRFFHACILYDVL 540
RVA+ +G+ E + G + + + +L RF+ A +LY ++
Sbjct: 667 LSSSERRVADLIGIEERFITRCAGGAPSSAVGCHGNTNMVNRRLSLHRRFYTALVLYRLV 726
Query: 541 NFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELWCY-KQLLTDLPQTLMY 599
N D Q VAK +G+ LQ+ + +A V FC L W + ++++ + L Y
Sbjct: 727 NEDGLQIVAKKFGVNRGLLQSLQQQAATYAGMVTIFCNRLG--WNHMERVIANFQSRLCY 784
Query: 600 CRAPNLRALMD-LPGVKIGRARQLLNAGYSSLELIARADAKEMVAKI--RHLPLRSARN 655
+ L L+ LP V RAR L AGYSS+ +A A +E +++I R +P N
Sbjct: 785 GVSDELVDLIRLLPLVNAERARALYAAGYSSVSSLASARPQE-ISRILQRAIPFERKNN 842
>gi|360044621|emb|CCD82169.1| putative dna polymerase theta [Schistosoma mansoni]
Length = 1258
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 143/430 (33%), Positives = 217/430 (50%), Gaps = 51/430 (11%)
Query: 28 GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILE 87
G PP L+ ++ +CTIEK + L+ LI+E R+DE+G++V+DE H++ + RG +LE
Sbjct: 116 GHSPPGG--LSAINVAVCTIEKANSLVNRLIEEERLDELGIVVVDELHLIGDTHRGYLLE 173
Query: 88 CVVSKVLYLKK--SIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQ 145
+++K+L+ + IQI MSAT+ N+ +L +++ Y+ N RP +E++
Sbjct: 174 LLLTKLLFYSRPYGIQIVGMSATLPNLKSLGQWLDAEVYITNFRPVPLTEFIL------- 226
Query: 146 SFDGKSLTEIY---------ADNL--------DYSLTGSGPDAVLHLVQGNLM----VLI 184
S D +S T + ADNL D L D V L L+ VL+
Sbjct: 227 SCDARSKTNQFYKIVKSAKPADNLPLDPQLTSDTELNMVDEDGVFALCFDTLLNGHGVLV 286
Query: 185 FCSSKIACSNLALRLQFDRFP------GTKEYKKQEKEDLIEALKE--ENDGKLSTNLEE 236
FC +K C LA + D P GT+ + ++ L+ + + L T L
Sbjct: 287 FCPTKQWCEQLADSMAHD--PSVHSNIGTRLALQLDRSGLVTCVDQLKRCPAGLDTILAR 344
Query: 237 CILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGRD 296
C+ YGVA+HHA LT ER +IE + G ++I+ TSTL++GVNLPA+RVIIR
Sbjct: 345 CLGYGVAFHHAGLTVEEREIIEFGFRKGLIRILIATSTLSSGVNLPARRVIIRTPLFHGK 404
Query: 297 FISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISS----HMDPP 352
+ YKQM GRAGR G+ SG+SI+LCK +D R ++ G P++S H P
Sbjct: 405 VLDFLTYKQMSGRAGRQGVDTSGQSILLCKP-KDLGRVRQLIMNGMPPVNSCLMGHGGSP 463
Query: 353 --TLVDLILEVVAANLCSSLEDVKTLIKHTLFYQLKSPEDQQTF--LETTLSEIVASLLA 408
+L +LEV+ +L D + TL + E F ++T SL
Sbjct: 464 ESSLKRALLEVIVNGFVETLSDALLYLSSTLLATTVTWEKLNEFNNSQSTKGNRRRSLRL 523
Query: 409 SKGTMLTMNE 418
S+ T + NE
Sbjct: 524 SQPTTYSENE 533
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 137/299 (45%), Gaps = 28/299 (9%)
Query: 373 VKTLIKHTLFYQLKSPEDQQTFLETTLSEIVASLLASKGTMLTMNEAGHLSLTSIAKAAV 432
+K L KH Y DQ T + + I S + S+ +++N A L T++ +A +
Sbjct: 556 IKDLQKHEFIYI-----DQSTCPNVSKNVINMSFVDSQSLEVSLNGA-RLQPTALGRAVL 609
Query: 433 QAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEYRIPSDGILLSRSKVYDRYTK 492
+ L LI+Y +L + + L LH+++L+ P+ + +D L ++Y
Sbjct: 610 SSSLGPIHGLIVYEELDRARRSIALDTELHLVYLLTPVYLDVGAD---LDWLCYLEQYQS 666
Query: 493 FHPQTLRVAEALGVTENLVALNVTG------------KLKDEKKALLCRFFHACILYDVL 540
RVA+ +G+ E + G + + + +L RF+ A +LY ++
Sbjct: 667 LSSSERRVADLIGIEERFITRCAGGAPSSAVGCHGNTNMVNRRLSLHRRFYTALVLYRLV 726
Query: 541 NFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELWCY-KQLLTDLPQTLMY 599
N D Q VAK +G+ LQ+ + +A V FC L W + ++++ + L Y
Sbjct: 727 NEDGLQIVAKKFGVNRGLLQSLQQQAATYAGMVTIFCNRLG--WNHMERVIANFQSRLCY 784
Query: 600 CRAPNLRALMD-LPGVKIGRARQLLNAGYSSLELIARADAKEMVAKI--RHLPLRSARN 655
+ L L+ LP V RAR L AGYSS+ +A A +E +++I R +P N
Sbjct: 785 GVSDELVDLIRLLPLVNAERARALYAAGYSSVSSLASARPQE-ISRILQRAIPFERKNN 842
>gi|383861260|ref|XP_003706104.1| PREDICTED: DNA polymerase theta-like [Megachile rotundata]
Length = 1983
Score = 189 bits (479), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 184/652 (28%), Positives = 311/652 (47%), Gaps = 69/652 (10%)
Query: 42 IYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYL----- 96
+ I TIEK + LI L++EN + +G +VIDE H++ +P RG +LE +++K+ Y+
Sbjct: 310 VAIATIEKANSLINRLMEENELVNLGAVVIDELHLVGDPNRGYLLELLLTKLKYMTIRNE 369
Query: 97 KKSIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSFDGK------ 150
++Q+ MSAT+ N++ L+ ++ Y RP +E + K ++ D +
Sbjct: 370 NINVQLIGMSATLPNLSLLADWLNAELYKTEFRPVPLNEQCKMGKNIY---DNELHLIRT 426
Query: 151 --SLTEIYADNLDYSLTGSGPDAVLHL----VQGNLMVLIFCSSKIACSNLALRLQFDRF 204
+ E+ AD+ D +LHL + +LIFC +K C LA +
Sbjct: 427 LIPIPELTADSGD----------ILHLCIETISDGHSILIFCPTKNWCEKLAEHI----- 471
Query: 205 PGTKEYKKQEKED--LIEALKEENDGKL-STNLEE--------------CILYGVAYHHA 247
+ K KED L E L+ + D L S LE+ + +G A+HHA
Sbjct: 472 --ASMFYKLGKEDTKLAEILRHQLDSTLISETLEQLRRSPIGLDNILKNTVSFGTAFHHA 529
Query: 248 DLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGRDFISLNMYKQMV 307
LT ER +IE A+ +G+L+++ TSTL++GVNLPA+RVIIR + Y+QM+
Sbjct: 530 GLTMDERDIIEGAFRSGSLRVLVATSTLSSGVNLPARRVIIRSPIFNGKVLDSLTYRQMI 589
Query: 308 GRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMD-PPTLVDLILEVVAANL 366
GRAGR G +GESI++C++ + + + A +PI S ++ L+ +LE +A+ +
Sbjct: 590 GRAGRMGKDTAGESILICESHEQKAAKALLSAAL-KPIESCLENSGPLIRALLEAIASEV 648
Query: 367 CSSLEDVKTLIKHTLFYQLKSPEDQQTFLETTLSEIVASLLASKGTMLTMNEAGHLSL-T 425
+ D++ K TL + S D + +E + L+ ++ +L E GH + T
Sbjct: 649 VYTPSDLELYTKCTLI-SMDSEHDSK----DPSNEAIKFLIDNEFLLLQNTEDGHRWVAT 703
Query: 426 SIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEYRIPSDGILLSRSK 485
+ KA + A + L + +L + F L LH+++LV P+ I
Sbjct: 704 AFGKACLAASIPPREGLFLLEELQKARRCFVLDTELHVVYLVTPVNSGSQIGAI--DWMT 761
Query: 486 VYDRYTKFHPQTLRVAEALGVTENLVALNVTGKLKDEKK-ALLCRFFHACILYDVLNFDN 544
+ + RV + +GV E + + G ++ K + RF+ A L+D++
Sbjct: 762 FLELWKMLSESERRVGQLVGVEERFLTSAIKGIVRPGKSLNIHRRFYTALALHDLVREMP 821
Query: 545 HQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELW-CYKQLLTDLPQTLMYCRAP 603
V K YG LQ+ S FA V +FC++L W C + L++ L +
Sbjct: 822 LGTVCKKYGCCRGVLQSLQQSASTFAGMVTQFCKQLG--WDCMELLVSQFQARLQFGVCR 879
Query: 604 NLRALMDLPGVKIGRARQLLNAGYSSLELIARADAKEM-VAKIRHLPLRSAR 654
L L+ LP + RAR L G + + +A A+ ++ A + LP S +
Sbjct: 880 ELLDLLRLPMLNGLRARSLYKQGITCVADLAVANELDVERALYKALPFESGK 931
>gi|46124913|ref|XP_387010.1| hypothetical protein FG06834.1 [Gibberella zeae PH-1]
Length = 873
Score = 186 bits (472), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 168/686 (24%), Positives = 296/686 (43%), Gaps = 83/686 (12%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSL--- 57
+V EK + L + +F E + +R+ ++ ++ + G K+ +
Sbjct: 176 LVQEKVRWLRSVVQGLRFAPE--TAIDDDKRIWRRRADENAVRVVGFFGGGKVRATWADF 233
Query: 58 ---IQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINA 114
I + I ++ +V+DE HM+++ RG +LE + +K+L L++S+QI MSAT+ N++
Sbjct: 234 DIAIDDCSISKLSAVVLDELHMIDDDHRGYLLELMATKLLSLEQSVQIVGMSATLPNMDM 293
Query: 115 LSTFIEGITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGP----- 169
++ ++ G Y RP E++ D ++ + SL + A L+ T +
Sbjct: 294 MAKWLGGHCYETRYRPVPIEEHLVYDGNIYPAGSTSSLIKTAA-QLNSRTTQTQAQTKPI 352
Query: 170 ------------DAVLHLVQ--------GNLMVLIFCSSKIACSNLALRLQFDRFPGTKE 209
D VL+ V L+F S+ C + A R P E
Sbjct: 353 RRIEPSNHKELRDPVLNAVVTLACETAVAGFGALVFAGSRGMCESDA-RWITRAMPAPHE 411
Query: 210 YK---KQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTL 266
+ + DL+ L+ N G L LEE +LYGVA+HHA LT ER L+ A
Sbjct: 412 LRIDVVDRRMDLLGELRSLNTG-LDPVLEETVLYGVAFHHAGLTTEERDLVAAA------ 464
Query: 267 QIICCTSTLAAGVNLPAQRVIIRDSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCK 326
PA+RVI+ + +GRDF+ +M +QM GRAGR G GE+ + C+
Sbjct: 465 ---------------PARRVILHNCRMGRDFVGPSMLRQMRGRAGRQGKAPIGETYLCCR 509
Query: 327 TMQDFLRFSSMMNAGPEPISSHMDPPT--LVDLILEVVAANLCSSLEDVKTLIKHTLFYQ 384
D + +MNA P++S + + +LEV++ L +S E + +L
Sbjct: 510 E-NDLEQVVELMNAELPPVASCLSTENRRIQRALLEVISIRLATSHEAISDYFSKSLLSH 568
Query: 385 LKSPEDQQTFLETTLSEIVASLLASKGTMLTMNEAGHLSLTSIAKAAVQAGLSHDVCLII 444
+ + + ++L EI S G +T + + T + KA V + + D + +
Sbjct: 569 THDAQFVKKCITSSLEEI-----ESMG-FITQDSLSMFTATQLGKAIVASAIDPDDGVFV 622
Query: 445 YSDLLHNKLNFCLLNSLHMLFLVIPLEYRIPSDGILLSRSKVYDRYTKFHPQTLRVAEAL 504
+ +L F + +H+L+ P++ G++++ + + LRV L
Sbjct: 623 HDELSRALQAFVMDGEMHVLYTFTPVQ----ESGVMVNWQVFRNEMERLDESGLRVLRLL 678
Query: 505 GVTENLV-------ALNVTGKLKDEKKALLCRFFHACILYDVLNFDNHQKVAKMYGIQNS 557
G+ V L T + + + + RF+ A L D+ N VA+ Y +
Sbjct: 679 GIKPTTVLKLAQGATLRETTQEEKQVARVHRRFYLALQLRDLCNEVPIHIVARKYDVPRG 738
Query: 558 HLQNFLNVTSYFASKVYRFCEELPELW-CYKQLLTDLPQTLMYCRAPNLRALMDLPGVKI 616
+QN FA+ + +FCE++ W L L+ +L AL +P +K
Sbjct: 739 MVQNLSQTCQGFAAGMIKFCEQMS--WGVMAAALDHFSDRLVAGARADLLALAKIPFIKS 796
Query: 617 GRARQLLNAGYSSLELIARADAKEMV 642
AR G+ ++ IA AD E++
Sbjct: 797 RTARVFWENGFRTVATIANADPTELL 822
>gi|11500032|ref|NP_071282.1| SKI2-family helicase [Archaeoglobus fulgidus DSM 4304]
Length = 691
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 172/649 (26%), Positives = 295/649 (45%), Gaps = 81/649 (12%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVK-----GQYPPTKRQLNKKSIYICTIEKGSKLIG 55
+ EKY+S K E G++ G Y L I + T EK LI
Sbjct: 80 LAGEKYESFKKW---------EKIGLRIGISTGDYESRDEHLGDCDIIVTTSEKADSLIR 130
Query: 56 SLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINAL 115
+ + + I + +V+DE H+L+ +RG LE +V+K+ + K++++ +SAT N+ +
Sbjct: 131 N--RASWIKAVSCLVVDEIHLLDSEKRGATLEILVTKMRRMNKALRVIGLSATAPNVTEI 188
Query: 116 STFIEGITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHL 175
+ +++ YV + RP E V + + FDG T S + V
Sbjct: 189 AEWLDADYYVSDWRPVPLVEGVLCEG-TLELFDGAFST---------SRRVKFEELVEEC 238
Query: 176 VQGNLMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLE 235
V N VL+F S++ A++L T +Y E E L +A+ EEN+G++S L
Sbjct: 239 VAENGGVLVFESTRRGAEKTAVKLS----AITAKY--VENEGLEKAILEENEGEMSRKLA 292
Query: 236 ECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIR-----D 290
EC+ G A+HHA L G+RR++E+A+ G ++++ T TLAAGVNLPA+RVI+R D
Sbjct: 293 ECVRKGAAFHHAGLLNGQRRVVEDAFRRGNIKVVVATPTLAAGVNLPARRVIVRSLYRFD 352
Query: 291 SYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMD 350
Y R I ++ YKQM GRAGR G+ E GE+I++ + + PE I+S +
Sbjct: 353 GYSKR--IKVSEYKQMAGRAGRPGMDERGEAIIIVGKRDREIAVKRYIFGEPERITSKLG 410
Query: 351 PPTLVDL-ILEVVAANLCSSLEDVKTLIKHTLFYQLKSPEDQQTFLETTLS---EIVASL 406
T + L ++ +LE+++ T F++ E +LS E V
Sbjct: 411 VETHLRFHSLSIICDGYAKTLEELEDFFADTFFFKQN---------EISLSYELERVVRQ 461
Query: 407 LASKGTMLTMNEAGHLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFL 466
L + G ++ E HL+ T + + V + I+ D+L +++ + +LH++
Sbjct: 462 LENWGMVV---EDHHLAPTKLG-SLVSRLYIDPLTGFIFHDVL-SRMELSDIGALHLIC- 515
Query: 467 VIPLEYRIPSDGILLSRSKVYDRYTKFHPQTLRVAEALGVTENLVALNVTGKLKDEKKAL 526
R P + R V + + R+ + L + ++ L + K A
Sbjct: 516 ------RTPD----MERLTVRKTDSWVEEEAFRLRKELSYYPSDFSVEYDWFLSEVKTA- 564
Query: 527 LCRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELWCY 586
LC L D + + ++ YGI L+ + + ++ + R EE+
Sbjct: 565 LC-------LKDWIEEKDEDEICAKYGIAPGDLRRIVETAEWLSNAMNRIAEEVG----- 612
Query: 587 KQLLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIAR 635
++ L + + + L L+ + + RAR+L NAG + E I R
Sbjct: 613 NTSVSGLTERIKHGVKEELLELVRIRHIGRVRARKLYNAGIRNAEDIVR 661
>gi|385806411|ref|YP_005842809.1| DEAD/DEAH box helicase [Fervidicoccus fontis Kam940]
gi|383796274|gb|AFH43357.1| DEAD/DEAH box helicase domain protein [Fervidicoccus fontis Kam940]
Length = 708
Score = 185 bits (470), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 180/685 (26%), Positives = 312/685 (45%), Gaps = 88/685 (12%)
Query: 10 AKAAEEFKFYLE-EYAGVK-----GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRI 63
A A E++ ++E E G++ G Y ++ L + I + T EK ++ + + +
Sbjct: 79 ALAIEKYSDFIEYERIGIRTIATMGDYDSSEPMLERYDIIVATYEKMDSILRH--RPSWL 136
Query: 64 DEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGIT 123
+ L++IDE H L++ +RGP+LE +++K+ +K QI +SAT+GN +S++++
Sbjct: 137 SRVSLVIIDEIHYLDDEKRGPVLESLIAKLKSMKSDAQILGLSATVGNPEEISSWLDAEL 196
Query: 124 YVENSRPTKHSEYVTVDKRV-FQSFDGKSLTEIYADNLDYSLTGSGP--DAVLHLVQGNL 180
+ + RP E V ++ F + K ++E + S P D + ++
Sbjct: 197 VLSSWRPIPLKEGVYYRGKIKFSDGEEKKISEPF----------SSPVLDLINDVISDGG 246
Query: 181 MVLIFCSSKIACSNLAL----RLQFDRFPGTKEYKKQEKEDLIEALKEENDGK-LSTNLE 235
++F +S+ +LA RL+ + K E E+L + + E ++ + L+ L
Sbjct: 247 QAIVFVNSRRRAVSLAQTVAKRLKMN--------KSSEAEELSKLIIESSEVQSLNEVLS 298
Query: 236 ECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS--YV 293
E I V++HHA LT +RR+IEE + G + +I T TLAAGVNLPA+RVII S YV
Sbjct: 299 EMIKNRVSFHHAGLTVEQRRMIEEGFRKGAINVIVATPTLAAGVNLPARRVIIESSERYV 358
Query: 294 ---GRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLR-FSSMMNAGPEPISSHM 349
G I + YKQ GRAGR G E GE+I++ + FS +N PE I S M
Sbjct: 359 AGEGNSPIKVLEYKQFAGRAGRPGYDEYGEAILIAGDPVEVREMFSQYINGKPESIYSKM 418
Query: 350 DPPT-LVDLILEVVAANLCSSLEDVKTLIKHTLFYQLKSPEDQQTFLETTLSEIVASLLA 408
+ +L +A LED++ +K+TL+ + S E + L +L L
Sbjct: 419 GSSSAFRSHLLSYIATLEKLRLEDIRGFVKNTLYSRQMSQESAKKLLSDSL-----RFLK 473
Query: 409 SKGTMLTMNEAGHLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHML---- 464
KG E + TS K SDL + L+ L+
Sbjct: 474 EKG--FIEEEGKYYKATSYGKYV--------------SDLYIDPLSAELVKEAFSKKKRA 517
Query: 465 --FLVIPLEYRIPSDGILLSRSKVYDR----YTKFHPQTLRVAEALGVTENLVALNVTGK 518
F ++ + P L + K + + + + P+ L LG+ + V+
Sbjct: 518 TDFSIMHIIAATPDMPKLSLKKKEFAKIDAAFVELIPEIL-----LGLEDRDVSY----- 567
Query: 519 LKDEKKALLCRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCE 578
+ +L A LYD +N Q++ + Y + + +F+ ++ A +Y+ +
Sbjct: 568 -----EDILSEVKTALFLYDWINEVPEQEICEKYDLGPGDVYSFIESAAWIAYAIYKLSD 622
Query: 579 ELPELWCYKQLLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIARADA 638
L + Y + L L + Y L L+ +P + RAR L ++G+ S+E I +A
Sbjct: 623 VLEQAKQYSKKLEALSYRVKYGIKEELYELVSIPEIGRVRARNLYSSGFRSIEDIRKASV 682
Query: 639 KEMVAKIRHLPLRSARNLISAAKLH 663
E++ ++R + R A + A H
Sbjct: 683 NELM-RVRGIGERLAYRIKEYALKH 706
>gi|435849891|ref|YP_007301832.1| superfamily II helicase [Methanomethylovorans hollandica DSM 15978]
gi|433663379|gb|AGB50804.1| superfamily II helicase [Methanomethylovorans hollandica DSM 15978]
Length = 752
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 142/417 (34%), Positives = 217/417 (52%), Gaps = 40/417 (9%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVK-GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQ 59
+ +EKYQ K E+F G+ G+ L K I +CT EK ++ + Q
Sbjct: 84 LANEKYQRF-KEFEKFGIL----TGISTGELESKSEGLGKNDIVVCTSEKTDSMLRNGTQ 138
Query: 60 ENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFI 119
+ + ++V+DE H+L+E RGP LE V++K+ + ++QI A+SATIGN L+ ++
Sbjct: 139 --WLQTLSIVVVDEVHLLDEKSRGPTLEIVMTKLRKIP-NLQIVALSATIGNTQVLADWL 195
Query: 120 EGITYVENSRPTKHSEYVTVDKRV-FQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQG 178
+ V + RPTK E V K + F S D EI D + D L ++
Sbjct: 196 KAELTVSDWRPTKLQEGVVFGKSMNFLSEDPVIQKEIVHDTKE-----PAADVALDTIKE 250
Query: 179 NLMVLIFCSSKIACSNLALRLQFDRFPGTKEYKK------QEKEDLIEALKEE----NDG 228
L+F SS+ C A R P +E+K+ Q++++ + + EE +D
Sbjct: 251 GGQCLVFESSRRTCMAFAKRFSN---PKNREHKQINILLSQDEKNKLAEISEEIEYSSDT 307
Query: 229 KLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVII 288
S NL ECI GVA+HHA L A +RRL+E+ + +++I CT TLAAG+NLPA+RV+I
Sbjct: 308 TESNNLAECIRNGVAFHHAGLNAAQRRLVEDGFKENKIKVISCTPTLAAGLNLPARRVVI 367
Query: 289 R-----DSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQ--DFLRFSSMMNAG 341
R D+ G I + YKQMVGRAGR L G+S+++ K+ DFL + ++A
Sbjct: 368 RSFLRYDANEGNIPIPVLDYKQMVGRAGRPHLDPYGQSLLIAKSSDKIDFLE-TKYIHAK 426
Query: 342 PEPISSHM-DPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQLKSPEDQQTFLET 397
E ISS + L IL ++++ + +S + V + T FY S D F+ET
Sbjct: 427 AEDISSKLGSEKALRSHILAIISSGIATSQKGVIDFLSET-FYAHTS--DLSYFIET 480
>gi|346322629|gb|EGX92228.1| DNA-directed DNA polymerase theta [Cordyceps militaris CM01]
Length = 871
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 161/623 (25%), Positives = 288/623 (46%), Gaps = 62/623 (9%)
Query: 42 IYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQ 101
I +CT+EK + L+ + I+ I ++ +V+DE HM+++ RG LE + +K+L L+ ++Q
Sbjct: 254 IGVCTLEKANMLVNAAIENCSIAKLQAVVLDELHMIDDEHRGYTLELIGTKLLSLEHTVQ 313
Query: 102 IFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLD 161
I MSATI N++ ++ ++ ++ RP E++ + +F + + + L + AD L
Sbjct: 314 IVGMSATIPNMDLMAKWLNAHSFETRYRPVPIEEHLVCNGAIFAADNPRCLPD-NADQLK 372
Query: 162 YSLTGS----GPDAVLHLVQGNLMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKED 217
SL + GP L L ++ + + A + + + F G++
Sbjct: 373 NSLVDAVRTIGPSLHKELSDPVLNAVVALAHETASAGYGVLI----FAGSR--------- 419
Query: 218 LIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAA 277
++ +L CI A +TA ER LI AY +GTL + T +LAA
Sbjct: 420 -----------SMTESLARCI------SRAGITAEERELIAAAYDSGTLLVCVATCSLAA 462
Query: 278 GVNLPAQRVIIRDSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSM 337
G+NLPA+RVI+ ++ +GRDFI M +QM GRAGR G GE+ + C+ D +
Sbjct: 463 GINLPARRVILHNARMGRDFIGPAMLRQMRGRAGRQGKSPVGETYLCCRE-ADLETVVQL 521
Query: 338 MNAGPEPISSHMDPPT--LVDLILEVVAANLCSSLEDVKTLIKHTLFYQLKSPEDQQTFL 395
+ A ++S + + +LEV+A +L +S + ++ +L L +D+
Sbjct: 522 IKAELPKVTSCLTSENRRVQRAVLEVIAIHLATSYDSIRFYFGKSL---LALTQDEARVD 578
Query: 396 ETTLSEIVASLLASKGTMLTMNEA-GHLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLN 454
E ++ ASL +G L ++A G+ + T + +A V + + D + ++ +L+
Sbjct: 579 E----DLKASLKDLEGLELIESDAFGNYAPTQLGRAIVASAIDPDDGIFVHRELVKALRA 634
Query: 455 FCLLNSLHMLFLVIPLEYRIPSDGILLSRSKVYDRYTKFHPQTLRVAEALGVTENLV--- 511
F + LH+L++ P++ G+ ++ + LRV LG+ +
Sbjct: 635 FVMDGELHILYIFTPVQ----DLGVTINWQVFRNELQLLDESGLRVLRFLGIKPTAILKF 690
Query: 512 --ALNVTGKLKDEKKA--LLCRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTS 567
+ V ++K+ + RF+ A L D+ N VA+ Y +Q
Sbjct: 691 AQGVPVPENTPEQKEMSRVYRRFYLALQLRDLCNEMPIHVVARKYDAPRGSVQTLSQTCH 750
Query: 568 YFASKVYRFCEELPELWCYKQLLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGY 627
F + V +FC+ + + L L+ L L +P +K AR GY
Sbjct: 751 GFGAGVIKFCQHM-DWGLMAAALDHFSDRLLAGARTELLCLAKIPFIKSRTARVFWENGY 809
Query: 628 SSLELIARADAKEMV----AKIR 646
++ IA AD KE+V +KIR
Sbjct: 810 RTVGTIANADPKELVPANPSKIR 832
>gi|296811628|ref|XP_002846152.1| DNA polymerase theta isoform 2 [Arthroderma otae CBS 113480]
gi|238843540|gb|EEQ33202.1| DNA polymerase theta isoform 2 [Arthroderma otae CBS 113480]
Length = 867
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 172/632 (27%), Positives = 269/632 (42%), Gaps = 101/632 (15%)
Query: 42 IYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQ 101
I +CTIEK + L+ + I+E ID++G+IV+DE HML++ RG ++E +V+K+L L++ IQ
Sbjct: 254 IAVCTIEKANSLVNTAIEECTIDKLGVIVLDELHMLDDEHRGYLIEIMVTKLLLLQQDIQ 313
Query: 102 IFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSFDGKS-LTEIYADNL 160
I MSAT+ N L+ ++ Y+ RP E++ + ++ K L ++ N+
Sbjct: 314 IIGMSATLSNTEVLAKWLNANYYISRYRPIPVEEFLVFEDYIYPVPTTKGLLRKMIKPNI 373
Query: 161 DYS------------------LTGSGPDAVLHL----VQGNLMVLIFCSSKIACSNLALR 198
S L P+A++ L L+FC S+ AC A+
Sbjct: 374 SNSKDVPASACRVIRKSEFRELAFPIPNAMVALACETAAAGYGALVFCGSRQACQTNAV- 432
Query: 199 LQFDRFPGTKEYKKQEKE-DLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLI 257
L D P T + + EK DL+ +L+ G L T I GVA+HHA LT ER LI
Sbjct: 433 LIADAMPDTLDAEIIEKRLDLVASLQSLPCG-LDTYFARTIPRGVAFHHAGLTTEERVLI 491
Query: 258 EEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGRDFISLNMYKQMVGRAGRTGLQE 317
E + AG L+++ T +LAAG+NLPA+RVI+ + +GRD +
Sbjct: 492 AEGFDAGILKVLVATCSLAAGINLPARRVILCGARMGRDLV------------------- 532
Query: 318 SGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKTLI 377
GP ++ +LE +A L S + + I
Sbjct: 533 -----------------------GPAMLA-----------LLEAIATKLVSGRDAIYDYI 558
Query: 378 KHTLFYQLKSPEDQQTFLE---TTLSEIVASLLASKGTMLTMNEAGHLSLTSIAKAAVQA 434
+ +L + E Q T LE +TL E++ S L + T T + A V +
Sbjct: 559 RSSLLFH--DGEGQDTLLEMVQSTLQELLDSELVKSSSDETFEP------TQLGLAIVAS 610
Query: 435 GLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEYRIPSDGILLSRSKVYDRYTKFH 494
S D L IY +L F + +H+ ++ PL+ D + D
Sbjct: 611 AFSPDDGLFIYGELKRALQAFVMDGEMHIFYMFAPLQTSSEIDWMTFR-----DEVHGLD 665
Query: 495 PQTLRVAEALGVTENLVALNVTGKLKDEKKALL---CRFFHACILYDVLNFDNHQKVAKM 551
LR +GV LV G + ALL R + A L D+ N +AK
Sbjct: 666 DSGLRTIRLVGVDPGLVNSIAMGHASIKDPALLRVYNRVYTAFQLRDLSNEIPVSSIAKK 725
Query: 552 YGIQNSHLQNFLNVTSYFASKVYRFCEELPELWCYKQLLTD-LPQTLMYCRAPNLRALMD 610
Y +Q FA+ + +FC+ + W ++ D + L +L +
Sbjct: 726 YNTARGAVQMLAQNCHGFAAGMAKFCQRMG--WDMLAVVLDHMRDRLQAGARADLLEMAQ 783
Query: 611 LPGVKIGRARQLLNAGYSSLELIARADAKEMV 642
+ VK AR L G+ SL +A A E+V
Sbjct: 784 VTYVKSRTARLLWENGFKSLRSLAEAAPSELV 815
>gi|116754111|ref|YP_843229.1| ski2-like helicase [Methanosaeta thermophila PT]
gi|116665562|gb|ABK14589.1| DEAD/DEAH box helicase domain protein [Methanosaeta thermophila PT]
Length = 693
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 167/639 (26%), Positives = 280/639 (43%), Gaps = 106/639 (16%)
Query: 28 GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILE 87
G + +L + I I T EK LI + + + IG++V+DE H+L+ RGP LE
Sbjct: 105 GDFEKRDERLGRNDIIIATSEKADSLIRN--GASWVRRIGVLVVDEIHLLDSANRGPTLE 162
Query: 88 CVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSF 147
++K+++L +Q+ +SATI N ++ +I+G + RP + E V ++ R+
Sbjct: 163 MTMTKLMHLNPEMQVIGLSATIANGREIADWIKGEIVSSDWRPVRLREGVLLEDRL---- 218
Query: 148 DGKSLTEIYADNLDYSLTGSGPDAVLHLV-----QGNLMVLIFCSSKIACSNLALRLQFD 202
++ D + L D VL+LV QG M LIF S++ ++A ++
Sbjct: 219 -------VFPDG-EIQLENRNRDPVLNLVLDTVDQGGQM-LIFESTRRNAESMAKKVSG- 268
Query: 203 RFPGTKEYKKQEKEDLIE-ALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAY 261
QE + IE A + +GK + L C+ +G A+HHA L +RRLIE +
Sbjct: 269 --------ALQESGETIELAERLSGEGKTAKKLAMCLRHGAAFHHAGLLPEQRRLIELGF 320
Query: 262 LAGTLQIICCTSTLAAGVNLPAQRVIIR-----DSYVGRDFISLNMYKQMVGRAGRTGLQ 316
+++I CT TLAAG+NLPA+RV+IR ++ +G I + Y+QM GRAGR GL
Sbjct: 321 RQNVVKVIACTPTLAAGLNLPARRVLIRSYKRYEAGLGTRPIPVMEYRQMAGRAGRPGLD 380
Query: 317 ESGESIMLCKTMQDFLRFSSMMNAG-PEPISSHM-DPPTLVDLILEVVAANLCSSLEDVK 374
GES+++ ++ + + G PE I S + L +L +A+ S++ +
Sbjct: 381 PYGESLIMARSESELQKLMDHYVMGEPEDIWSKLASERALRTHVLATIASRFADSVDSLS 440
Query: 375 TLIKHTLFYQLKSPEDQQTFLETTLSEIVASLLASKGTMLTMNEAGHLSLTSIAKAAVQA 434
L+ T + + + P + L E +AS+L
Sbjct: 441 RLMASTFYARQQDP--------SYLGETIASVLE-------------------------- 466
Query: 435 GLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEYRIPSDGILLSRSKVYDRYTKFH 494
++ SD++ L L +L + PL S +++ + R
Sbjct: 467 -------FLVRSDMIDKDLTPTPLGALVSRLYIDPL-----SAMVMIQEIRGIRR----- 509
Query: 495 PQTLRVAEALGVTENLVALNV--------------TGKLKDEKK--ALLCRFFHACILYD 538
P L + + +T ++ L V + +L +EK LL A +L D
Sbjct: 510 PTVLTLLHVITMTPDMELLFVQQSDNWLEDFISEHSSELGNEKNFDWLLREVKTASMLMD 569
Query: 539 VLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELWCYKQLLTDLPQTLM 598
+N + ++ Y I L + S ++R + + Y L L +
Sbjct: 570 WINEVHEDRIEDRYSISPGDLVRIAETAEWLMSALHRISKHMDLGVTY--LAERLALRIH 627
Query: 599 YCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIARAD 637
Y L L++L G+ RAR+L AGY SLE + AD
Sbjct: 628 YGAGDELLQLLELKGIGRVRARKLYQAGYRSLEDLKAAD 666
>gi|308811917|ref|XP_003083266.1| Cytoplasmic exosomal RNA helicase SKI2, DEAD-box superfamily (ISS)
[Ostreococcus tauri]
gi|116055145|emb|CAL57541.1| Cytoplasmic exosomal RNA helicase SKI2, DEAD-box superfamily (ISS)
[Ostreococcus tauri]
Length = 1038
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 191/706 (27%), Positives = 304/706 (43%), Gaps = 117/706 (16%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V E+ +LAK + YAG + + + TIEK + + ++
Sbjct: 316 LVRERAMALAKTLRARGIGVRAYAGGESEGWALG---GDARCAVTTIEKAANAVSRALER 372
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKS-------IQIFAMSATIG--N 111
DE+ ++V+DE HM++E +RG +LE +++++ + +S +I MSAT+ +
Sbjct: 373 GSFDELRIVVVDELHMVSEDERGGVLEGMLARIRHATRSGRARRGGPRIVCMSATVNARS 432
Query: 112 INALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPD- 170
+ L+ +++ TYV RP + E+V + VF G+ LT + D G
Sbjct: 433 LERLAKWLDAETYVGTYRPVELREHVVREDGVFVK-TGEGLTRVR----DAPRAGGSERE 487
Query: 171 ---AVLHLVQGNLMV-----LIFCSSKIACSNLALRLQ--FDRFPGTKEYKKQEKEDLIE 220
V+ + G + V L+FC+SK CSN+A RL F R P + E +E
Sbjct: 488 RELGVVAELVGEVFVHGHSTLVFCASKAQCSNVAKRLAGIFHRHPAAMSLR----ERFVE 543
Query: 221 ALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVN 280
L + +G +L + IL G+A+HHA LT E+ +IEE + G + + CT+TLAAGVN
Sbjct: 544 RLFDACEGAPDVDLVQAILSGIAWHHAGLTTAEKNVIEEGFRDGAILALTCTTTLAAGVN 603
Query: 281 LPAQRVIIRDSYV-GRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMN 339
LP +R II Y+ G S+ YKQM GRAGR G + GES ++ +++
Sbjct: 604 LPTRRTIIIPGYIAGTRTPSMAQYKQMAGRAGRKGQSDVGESFLIVMKKDAVAWAQNLVC 663
Query: 340 AGPEPISSHMDPPTL----------VDLILEVVAANLCSSLEDVKTLIKHTLFYQLKSPE 389
P+ S + PP+ LE +A + + ED L T + S +
Sbjct: 664 GDLPPLESRLFPPSRGRDAPPTAEQKKFYLESIACGILKTKEDAGELACRTFAWT--SED 721
Query: 390 DQQTFL---ETTLSEIVASLLASKGTMLTMNEAGHLSLTSIAKAAVQAGLSHDVCL--II 444
D + L E +L +I +G ++ + S + G + C I
Sbjct: 722 DYSSILLRQEVSLKQI-----HDEGVVMVRRTGEN----STEWCSTPEGFAFYRCSLPIA 772
Query: 445 YSDLLHNKLNFCLLNSL------HMLFLVIP---------LEYRIPSDGILLSRSKVYDR 489
++ L ++L+ L N L H+LF I L + + SD L V +
Sbjct: 773 HAKKLRSELDDALRNGLNLTSRTHLLFFCISNESNFLANNLNWHVWSD--WLEHDSVLHQ 830
Query: 490 YTKFHPQTLRVAEALGVTENLVA-----LNVTGKLKDEKKALLC---RFFHACILYDVLN 541
+ H LGVT L V+ E +A+ R A +L ++L
Sbjct: 831 LGEKH---------LGVTREYAEHAQYRLGVSA----ESRAVRSRHERLAAAHLLSELLA 877
Query: 542 -----FDNHQKVAKMYG-------IQNSHLQNFLNVTSYFASKVYRFCEELPELW-CYKQ 588
FD QK + M IQ+ LQN T+ AS + C W
Sbjct: 878 NDDTIFDIEQKWSLMSNGAIDRGKIQS--LQNMAATTAGMASVLANECG-----WSALAG 930
Query: 589 LLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIA 634
L+ ++ + L L LM L G+ RAR L NAG+ + +IA
Sbjct: 931 LMLNVSEELQAGARRELLPLMRLDGMTGARARSLYNAGFKTPTIIA 976
>gi|328867787|gb|EGG16168.1| hypothetical protein DFA_09196 [Dictyostelium fasciculatum]
Length = 1164
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 175/714 (24%), Positives = 319/714 (44%), Gaps = 122/714 (17%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V+EK S +++ +F +E Y G +G PPT ++ SI ICTIEK + ++ ++I+E
Sbjct: 471 IVNEKADSFKLLSQQLRFKVEGYYGNQGTIPPT----SEPSILICTIEKANLIVNTMIEE 526
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGN--INALSTF 118
+RI EIG +V+DE HM+ + RG +LE ++K+ M +T GN I +S
Sbjct: 527 DRIMEIGCVVVDELHMVGDGDRGALLELFIAKL-----------MYSTKGNAQIVGMSAT 575
Query: 119 IEGITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQG 178
I + +++ S T D+ + + +S T D D ++
Sbjct: 576 IPNLDALQSWLRADLSINGTRDRAIKLARKLRSHTTKDTDGNDINIAD------------ 623
Query: 179 NLMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECI 238
+ DR K Q K L ++L + D ++ + E I
Sbjct: 624 --------------------INRDR-------KNQIKARLQDSLGTQQDQEM---IFEAI 653
Query: 239 LYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGRDFI 298
GVA+H++ L+ ER +IE + + I+CCTSTL+AGVNLPA+RV++ + +G D I
Sbjct: 654 DMGVAFHNSQLSGEERDIIENGFKDRVINILCCTSTLSAGVNLPAKRVVLTSTKMGFDDI 713
Query: 299 SLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEP-ISSHMDPPTLVD- 356
S+ Y+QM GRAGR G +GES +L K + R +M EP IS P V+
Sbjct: 714 SVRTYRQMCGRAGRAGFDSNGESYLLSKDQKLPTR---LMTQEMEPLISGFNKEPAAVEQ 770
Query: 357 ------------------LILEVVAANLCSSLEDVKTLIKHTLFYQ-LKSPEDQQ----T 393
L ++ +++ + ++ + + T +++ ++ P+D
Sbjct: 771 KNNNNRKNNQQSNLNYEKLAIDCISSFIANTKHQLLEFLSCTFYFRSIRVPQDHNGTKYE 830
Query: 394 FLETTLSEIVASLLASKGTMLTMNEAGH----------LSLTSIAKAAVQAGLSHDVCLI 443
+++ L E + +L +G + G T + A ++ L+
Sbjct: 831 YIKGKLDECMG-VLEKEGFIQKKIIDGDEKKVDDRHVLWEPTGLGLATFRSTLNIKEAKY 889
Query: 444 IYSDLLHNKLNFCLLNSLHMLFLVIPLEYRIPSDGILLSRSKVYDRYTKFHPQTLRVAEA 503
++ +L + NF L L+ ++ P+ I ++ S Y + F VA
Sbjct: 890 LHLELDKIQRNFNLKEELNSCYVTTPMFGS--GLNITINWSNFYTLFKAFDQSRKDVANR 947
Query: 504 LGVTENLVALNVTGKLKDEKKA---------------LLCRFFHACILYDVLNFDNHQKV 548
LG++ + + DE+K + RF+ A L +++ ++ V
Sbjct: 948 LGISLYYIECHC-----DEEKTNDVYKMETNTPNIRQIHVRFYLAMALSELIQENSLHYV 1002
Query: 549 AKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELWCYKQLLTDLPQTLMYCRAPNLRAL 608
AK YGI LQ+ + +A + FC+ + + + ++ ++++ + L + + L
Sbjct: 1003 AKKYGIPRGSLQSTMQFCGTWAWMIVTFCKRM-QWYSFEAVISEYVKRLDHGVRAEVLPL 1061
Query: 609 MDLPGVKIGRARQLLNAGYSSLELIARADAKEMVAKI-RHLPLRSARNLISAAK 661
+++ G+ RAR L NAG + + IA D + K + SAR+++ +AK
Sbjct: 1062 LEVKGIGKARARALYNAGIKTCKEIASIDPGRLAEKFPKVFDPHSARDIVQSAK 1115
>gi|118430925|ref|NP_147034.2| holliday junction migration helicase [Aeropyrum pernix K1]
gi|150421571|sp|Q9YFQ8.2|HELS_AERPE RecName: Full=Putative ski2-type helicase
gi|116062250|dbj|BAA79103.2| holliday junction migration helicase [Aeropyrum pernix K1]
Length = 735
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 172/645 (26%), Positives = 302/645 (46%), Gaps = 73/645 (11%)
Query: 42 IYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQ 101
+ I T EK L+ + + + ++++DE H +++P+RGPILE +VS++L Q
Sbjct: 118 VVIATYEKFDSLL--RVSPSLARNVSVLIVDEIHSVSDPKRGPILESIVSRMLASAGEAQ 175
Query: 102 IFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSFDG-KSLTEIYADNL 160
+ +SAT+ N ++ +I G + RP EYV + +++ G + + +Y
Sbjct: 176 LVGLSATVPNAGEIAEWIGGKIVESSWRPVPLREYVFKEYKLYSPTGGLREVPRVYGL-- 233
Query: 161 DYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIE 220
Y L D ++ L+F S+ LA R R G + ++ + E
Sbjct: 234 -YDL-----DLAAEAIEDGGQALVFTYSRRRAVTLAKRAA-KRL-GRRLSSREARVYSAE 285
Query: 221 ALKEENDGK-LSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGV 279
A + E + ++ L I G+AYHHA L R+ +EEA+ AG ++++ T TLAAGV
Sbjct: 286 ASRAEGAPRSVAEELASLIAAGIAYHHAGLPPSLRKTVEEAFRAGAVKVVYSTPTLAAGV 345
Query: 280 NLPAQRVIIRDSY----VG-RDFISLNMYKQMVGRAGRTGLQESGESIMLCKTM---QDF 331
NLPA+RV+I DSY G R+ I + YKQM GRAGR GL E GE+I++ + + +D
Sbjct: 346 NLPARRVVI-DSYYRYEAGFREPIRVAEYKQMAGRAGRPGLDEFGEAIIVAERLDRPEDL 404
Query: 332 LRFSSMMNAGPEPISSHMDP-PTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQLKSPED 390
+ S + A PE + S + L IL +VA S+ ++ + TL Y L
Sbjct: 405 I--SGYIRAPPERVESRLAGLRGLRHFILGIVAPEGEVSIGSIEKVSGLTL-YSL----- 456
Query: 391 QQTFLETTLSEIVASLLASKGTMLTMNEAGHLSLTSIAKAAVQAGLSHDVCLIIYSDLLH 450
Q+ T++ V L A L + ++ TS+ + L + + ++ H
Sbjct: 457 QRGLPRETIARAVEDLSAWG---LVEVKGWRIAATSLGREVAAVYLDPESVPVFREEVKH 513
Query: 451 NKLNFCLLNSLHMLFLV--IPLEYRIPSDGILLSRSKVYDRYTKFHPQTLRVAEALGVTE 508
L+F N +L+L+ +P R+P+ ++ + P+ L + LG E
Sbjct: 514 --LSFD--NEFDILYLISTMPDMVRLPA--TRREEERLLEAILDASPRMLSSVDWLG-PE 566
Query: 509 NLVALNVTGKLKDEKKALLCRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSY 568
+ A+ K A++ + + ++ + + +G+ L N ++ +
Sbjct: 567 EMAAV---------KTAVVLKLW--------IDEASEDTIYGEWGVHTGDLLNMVSTAEW 609
Query: 569 FASKVYRFCEELPELWCYKQLLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYS 628
AS + R L +L+ + + + + P L L+++PGV RAR L AGY
Sbjct: 610 IASGLSRIAPYLGLNSKVSHILSVIARRIKHGVKPELLQLVEIPGVGRVRARILFEAGYR 669
Query: 629 SLELIARADAKEMVAKIRHLPL---RSARNLISAAKLHFITKMDK 670
S+E +A A A++++ LPL +AR + L F+ ++D+
Sbjct: 670 SIEDLATARAEDLM----RLPLIGPSTARQI-----LEFLGRVDE 705
>gi|435851983|ref|YP_007313569.1| superfamily II helicase [Methanomethylovorans hollandica DSM 15978]
gi|433662613|gb|AGB50039.1| superfamily II helicase [Methanomethylovorans hollandica DSM 15978]
Length = 734
Score = 179 bits (454), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 179/695 (25%), Positives = 307/695 (44%), Gaps = 100/695 (14%)
Query: 28 GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILE 87
G + L I I T EK L+ + + + + +I +IV+DE H+L+ P RGP LE
Sbjct: 102 GDFEARDEWLGANDIIIATSEKADSLLRN--ETSWMQDITVIVVDEVHLLDSPNRGPTLE 159
Query: 88 CVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSF 147
++K+ L QI A+SAT+GN ++ +++G + RPT E V
Sbjct: 160 VTIAKLRKLNPKAQIIALSATVGNAQEIADWLKGGLVLSEWRPTDLREGV---------- 209
Query: 148 DGKSLTEIYADNLDY-------SLTGS--GPDAVLHLVQGNLMVLIFCSSKIACSNLALR 198
YAD ++Y ++T S G + V+ ++ L+F SS+ C A +
Sbjct: 210 -------YYADTINYIGAQKAVAITSSDDGVNIVIDTLEEGGQCLVFESSRKNCVGFAKK 262
Query: 199 LQFDRFPGTKEYKKQEK---EDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERR 255
L DR K KQE+ + +++A+ E ++ + S L +CI GVA+HHA L + RR
Sbjct: 263 L--DRHV-DKLLSKQERSVLDKIVDAVIETSETEASKVLAQCIRNGVAFHHAGLNSAHRR 319
Query: 256 LIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIR-----DSYVGRDFISLNMYKQMVGRA 310
L+E+ + +++IC T TLAAG+NLPA+RV+IR DS G I + YKQM GRA
Sbjct: 320 LVEDGFRENMIKVICSTPTLAAGLNLPARRVVIRSYKRYDSNFGMQPIPVLEYKQMAGRA 379
Query: 311 GRTGLQESGESIMLCKTMQDF-LRFSSMMNAGPEPISSHMDPP-TLVDLILEVVAANLCS 368
GR L GES+++ ++ + F + +NA E + S + L +L + S
Sbjct: 380 GRPHLDPYGESVLIARSYDEMEALFGNYVNAKAEDVWSKLGTENALRTHVLSTIVNGFAS 439
Query: 369 SLEDVKTLIKHTLFYQLKSPEDQQTFLETTLSEIV--------ASLLASK-GTMLTMNEA 419
S E + + T F + + Q +E +++ ++ L A++ G +++M
Sbjct: 440 SEEGLMEFMSATFFAHQQEARNLQELVEQSIAFLLEHGMLQQEGRLRATRLGKLVSMLYI 499
Query: 420 GHLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEYRIPSDGI 479
LS +I + +AG D+ L+ C + L++
Sbjct: 500 DPLSAATILQGLEKAGKLTDLTLMHL---------VCSTPDMKQLYM------------- 537
Query: 480 LLSRSKVYDRYTKFHPQTLRVAEALGVTENLVALNVTGKLKDEKKALLCRFFHACILYDV 539
RS Y +F T+ E + ++ L + K AL F I D
Sbjct: 538 ---RSSDYTMINEF--ATVHKDEFARMPSPFKSIEYEWFLGEVKTAL---FMIKWI--DE 587
Query: 540 LNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCE--ELPELWCYKQLLTDLPQTL 597
+ D ++ + + + F ++ + + E E P + +L + +
Sbjct: 588 IPMD---EITAQFNVGEGDIHAFADIAQWLMHATAKLAETMEFPG----TEKAYELEKRI 640
Query: 598 MYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIARADAKEMVAKIRHL--PLRSAR- 654
Y L L+ + V RAR+L NAG +S+E + A V +I L P + R
Sbjct: 641 QYGANAQLLELVSIRDVGRVRARKLYNAGLTSVEALKNAG----VERIGQLIGPKTAERI 696
Query: 655 --NLISAAKLHFITKMDKVEAMKNLIQNLQKNYDN 687
N++ + + I EA+ ++ LQ+ + +
Sbjct: 697 MHNIMGSYQTGKIKGNGFAEAVYRPMERLQRTFSD 731
>gi|326429085|gb|EGD74655.1| hypothetical protein PTSG_06020 [Salpingoeca sp. ATCC 50818]
Length = 1156
Score = 179 bits (453), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 148/500 (29%), Positives = 238/500 (47%), Gaps = 38/500 (7%)
Query: 183 LIFCSSKIACSNLALRLQFDRFPGTKEYKKQEK--EDLIEALKEENDGKLSTNLEECILY 240
L+F SS+ AC NLA R P T+ +EK + + A+ E + L + +
Sbjct: 623 LVFNSSRRACENLA-RSYARTTPPTQLDAAREKVFDGIARAITREMATSGGSYLVQLMRR 681
Query: 241 GVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGRDFISL 300
GVAYHH LT R L+E AY G + ++ TSTLAAGVNLPA RVI+R Y+G ++
Sbjct: 682 GVAYHHGGLTKDVRELVERAYKEGCIFLLIATSTLAAGVNLPAHRVIVRTPYMGNKLLTR 741
Query: 301 NMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILE 360
+ Y QM GRAGR GL E+GE+ LC + R ++ E S + + DL
Sbjct: 742 SQYLQMSGRAGRVGLTETGEA-YLCLDKVNIKRALDIVAGACERCESQLA--SQQDLSRR 798
Query: 361 VVAANLCSS----LEDVKTLIKHTLFYQLKSPEDQQTFLETTLSEIVAS--LLASKGTML 414
++ + +C S + +V+ TL +++ E ++ L E +A+ L+A +G +
Sbjct: 799 LILSLVCGSSPLGMGEVEAFFNKTLL-AVQNKEQVPVVIDAAL-EYLANLRLIAVRGRV- 855
Query: 415 TMNEAGHLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEYRI 474
+ T + +G D ++ +D+ L LH+L LV P E+
Sbjct: 856 -------IQATPLGCGINASGFPCDTVGLVCADVDEFMRAAVLKTELHLLGLVTPFEH-- 906
Query: 475 PSDGILLSRSKVYDRYTKFHPQTLRVAEALGVTENLVALNVTGKLKD------------E 522
I + D + P E LG +EN+++ V G+L
Sbjct: 907 -VQHISPQFHTMLDDFASMSPDDQAAMERLGASENVLSRAVAGRLPSAPSHNNWATYFKS 965
Query: 523 KKALLCRFFHACILYDVLNFDNH-QKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELP 581
L R + IL+ V++ + + A YG+ +Q L + +A+ V FC+ELP
Sbjct: 966 PTGRLRRVYLTLILWTVMHRNASIYRAAAKYGVDAGLVQTLLQNAAVYAASVASFCKELP 1025
Query: 582 ELWCYKQLLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIARADAKEM 641
W + L + + + L + ++ LMD+PG+K RAR L +AG+ S + +ARA ++
Sbjct: 1026 AYWTIEHLASGMIKRLYFGVQHDIVDLMDIPGMKAQRARMLADAGFKSHKQLARAKPGDL 1085
Query: 642 VAKIRHLPLRSARNLISAAK 661
V+ I + + A NLI AA+
Sbjct: 1086 VSSIEFMSTKQAENLIQAAQ 1105
Score = 112 bits (279), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 88/145 (60%), Gaps = 1/145 (0%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V EK +L AE+ F+LE YAG G+ PP +R+ ++++++ TIEK L+ SLI
Sbjct: 272 IVQEKVAALEPLAEQIGFHLETYAGHLGRVPPLQRRDGQRTLFVATIEKAHSLLCSLIAN 331
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVL-YLKKSIQIFAMSATIGNINALSTFI 119
R+ +GL ++DE HML RG +LE +++ VL + ++I+I AM+AT+GN L+TF+
Sbjct: 332 RRLGRLGLCIVDEAHMLGYGSRGGVLETILTLVLHHAPRTIRIVAMTATVGNTGELATFL 391
Query: 120 EGITYVENSRPTKHSEYVTVDKRVF 144
RP E+V + RV+
Sbjct: 392 RARHVSSTQRPVTLREHVLFEGRVY 416
>gi|147920885|ref|YP_685308.1| ski2-like helicase [Methanocella arvoryzae MRE50]
gi|121690545|sp|Q0W6L1.1|HELS_UNCMA RecName: Full=Putative ski2-type helicase
gi|110620704|emb|CAJ35982.1| putative ski2-type helicase [Methanocella arvoryzae MRE50]
Length = 740
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 130/403 (32%), Positives = 206/403 (51%), Gaps = 47/403 (11%)
Query: 10 AKAAEEFKFYLE------EYAGVK-----GQYPPTKRQLNKKSIYICTIEKGSKLIGSLI 58
A A+E++ +LE + GVK G + L +K I + T EK L+ +
Sbjct: 78 ALASEKYDRFLEFSKLPIKPDGVKVGIATGDFDSRDEYLGEKDIIVATSEKTDSLLRN-- 135
Query: 59 QENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTF 118
+ + + ++V DE H+++ P RGP LE ++K+ + ++QI A+SATIGN AL+ +
Sbjct: 136 GASWLSGLSVVVADEVHLIDSPNRGPTLEVTLAKLRKINVNLQILALSATIGNAKALAKW 195
Query: 119 IEGITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQG 178
++ RPT E V F G+++T ++ +GPD V LV
Sbjct: 196 MDAALVQSEWRPTTLKEGV---------FYGRAIT---FKKEKRTVNNAGPDEVNSLVAD 243
Query: 179 NL----MVLIFCSSKIACSNLALR----LQFDRFPGTKEYKKQEKEDLIEALKEENDGKL 230
L L+F +++ + ++A + L P KE + K+D++ + + KL
Sbjct: 244 TLEEGGQCLVFANTRKSSESIAQKVARSLSKKLQPAEKEQLAKLKQDVLRHAETDTCEKL 303
Query: 231 STNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRD 290
+ EC+ GVA+HHA L RR++E+ + L++I CT TLAAG+NLPA+RVIIRD
Sbjct: 304 A----ECVGNGVAFHHAGLKGEHRRIVEDGFRQNILKVIACTPTLAAGLNLPARRVIIRD 359
Query: 291 ------SYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRF-SSMMNAGPE 343
+Y G I + YKQM GRAGR L GE++++ K +F + +NA PE
Sbjct: 360 YKRFDVNY-GSVPIPVLEYKQMAGRAGRPRLDPYGEAVLIAKNYDEFGELMENYINADPE 418
Query: 344 PISSHMDP-PTLVDLILEVVAANLCSSLEDVKTLIKHTLF-YQ 384
I+S + P + L VA + C S +D+K + T F YQ
Sbjct: 419 HITSKLGTEPAMRAHALSAVATDFCRSRQDLKAFMDTTFFAYQ 461
>gi|408388335|gb|EKJ68021.1| hypothetical protein FPSE_11832 [Fusarium pseudograminearum CS3096]
Length = 904
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 158/644 (24%), Positives = 277/644 (43%), Gaps = 79/644 (12%)
Query: 42 IYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQ 101
I +CT+EK + L+ + I + I ++ +V+DE HM+++ RG +LE + +K+L L++S+Q
Sbjct: 246 IGVCTLEKANALVNTAIDDCSISKLRAVVLDELHMIDDDHRGYLLELMATKLLSLEQSVQ 305
Query: 102 IFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYAD--- 158
I MSAT+ N++ ++ ++ G Y RP E++ D ++ + SL + A
Sbjct: 306 IVGMSATLPNMDMMAKWLGGHCYETRYRPVPIEEHLVYDGNIYPAGSTSSLIKTAAQLNS 365
Query: 159 -------------NLDYSLTGSGPDAVLHLVQ--------GNLMVLIFCSSKIACSNLAL 197
++ S D VL+ V L+F S+ C + A
Sbjct: 366 RTTQTQAQTKPIRRIEPSTHKELRDPVLNAVVTLACETAVAGFGALVFAGSRGMCESDA- 424
Query: 198 RLQFDRFPGTKEYK---KQEKEDLIEALKEENDGKLSTNLEECILYGVAYHH-------- 246
R P E + + DL+ L+ N G L LEE +LYGVA+H
Sbjct: 425 RWISRAMPAPHELRIDVVDRRMDLLGELRSLNTG-LDPVLEETVLYGVAFHRKRNSLLTV 483
Query: 247 ADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGRDFISLNMYKQM 306
+ A R E +A PA+RVI+ + +GRDF+ +M +QM
Sbjct: 484 SKFKANHNRPEERDLVAAA----------------PARRVILHNCRMGRDFVGPSMLRQM 527
Query: 307 VGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAANL 366
GRAGR G GE+ + C+ D + +MNA P++S + +VV+ L
Sbjct: 528 RGRAGRQGKAPIGETYLCCRE-NDLEQVVELMNAELPPVASCLSTEN-----RQVVSIRL 581
Query: 367 CSSLEDVKTLIKHTLFYQLKSPEDQQTFLETTLSEIVASLLASKGTMLTMNEAGHLSLTS 426
+S E + +L + + + ++L EI S G +T + + T
Sbjct: 582 ATSHEAISDYFSKSLLSHTHDSQFVKKSITSSLEEI-----ESMG-FITQDSLSMFTATQ 635
Query: 427 IAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEYRIPSDGILLSRSKV 486
+ KA V + + D + ++ +L F + +H+L+ P++ G++++
Sbjct: 636 LGKAIVASAIDPDDGVFVHDELSRALQAFVMDGEMHVLYTFTPVQ----ESGVMVNWQVF 691
Query: 487 YDRYTKFHPQTLRVAEALGVTENLV-------ALNVTGKLKDEKKALLCRFFHACILYDV 539
+ + LRV LG+ + L T + + + + RF+ A L D+
Sbjct: 692 RNEMERLDESGLRVLRLLGIKPTTILKLAQGATLRETTQEEKQIARVHRRFYLALQLRDL 751
Query: 540 LNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELW-CYKQLLTDLPQTLM 598
N VA+ Y + +QN FA+ + +FCE++ W L L+
Sbjct: 752 CNEVPIHIVARKYDVPRGMVQNLSQTCQGFAAGMIKFCEQMS--WGVMAAALDHFSDRLV 809
Query: 599 YCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIARADAKEMV 642
+L AL +P +K AR G+ ++ IA AD E++
Sbjct: 810 AGARADLLALAKIPFIKSRTARVFWENGFRTVATIANADPTELL 853
>gi|294886779|ref|XP_002771849.1| dna polymerase theta, putative [Perkinsus marinus ATCC 50983]
gi|239875649|gb|EER03665.1| dna polymerase theta, putative [Perkinsus marinus ATCC 50983]
Length = 1188
Score = 176 bits (445), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 175/669 (26%), Positives = 297/669 (44%), Gaps = 94/669 (14%)
Query: 42 IYICTIEKGSKLIGSLIQE--NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKS 99
+ + T+EK + ++ L+ + + +G ++IDE HM+ + QRG ILE ++ K++
Sbjct: 427 VALGTLEKVNGMVNRLVSQADSSTSNVGTVIIDELHMVGDEQRGHILELILLKLMLFATG 486
Query: 100 ------------IQIFAMSATIGNINALSTFI-EGITYVENSRPTKHSEYVTVDKRVFQS 146
+Q+ MSAT+ ++ L ++ E T+ RP +V V R+
Sbjct: 487 RITNSTDGELYQLQVVCMSATLPSLEPLKGWLLEADTFTTEFRPVPLEYFVKVGSRLHSG 546
Query: 147 FDGKSLTEIYADNLDYSLTGSGPDAVLHLV----QGNLMVLIFCSSKIACSNLALRLQFD 202
+ + EI + D PD + LV V++FC++K C A+ +
Sbjct: 547 DLDRVVREIPSLQRD-------PDRITALVWEVASNATGVIVFCATKAWCEKTAMHIA-G 598
Query: 203 RFPGTKEYKK----QEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIE 258
+PG + + ++ ++ L+ G L+ L + I GVAYHH+ LT ERR+IE
Sbjct: 599 TWPGVPWDRDDTVLRGRQQALDILRTCPAG-LNATLGKSIPTGVAYHHSGLTMEERRVIE 657
Query: 259 EAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGRDFISLNMYKQMVGRAGRTGLQES 318
A+ G + +C TSTLAAGVNLPA+RVIIR VG + + +QM GRAGR G S
Sbjct: 658 TAFRNGHIHTLCATSTLAAGVNLPARRVIIRSLQVGISPLDASRLRQMCGRAGRAGFTGS 717
Query: 319 --GESIMLCKTMQDFLRFSSMMNAGPEPISS---------HMDPPTLVDL---------I 358
GE+I+ K ++ ++NA +SS H P D+ +
Sbjct: 718 NKGEAILCVKDDREARTAKDLINAQLTGLSSRLTGIETAGHSIPMLTKDVHLGDLLTRAL 777
Query: 359 LEVVAANLCSSLEDVKT-LIKHTLFYQLKSPEDQQTFLETTLSEIVASL--LASKGTMLT 415
LEV+ L S ++++ L Y L+ E+ + L+ +E+ A L L S +
Sbjct: 778 LEVICLKLLSHVDEIPARFCPRLLRYHLQPDEETRNSLQ---AEVAACLEELKSNRFVKV 834
Query: 416 MNEAGHLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEYRIP 475
E G ++ T++ +A + L + +++ DL + L + LH+L+LV P+ + IP
Sbjct: 835 NEEDGLITSTALGEAVAFSSLKIEEASVVFRDLRRASVRILLSSDLHLLYLVTPVRHDIP 894
Query: 476 SDGILLSRSKVYDRYTKFHPQTLRVAEALGVTENLVALNVTGKL---------------- 519
+ + Y P+ +A+ G+ E LN +
Sbjct: 895 -----VHLEAYLNLYNSMTPEQRAIADRCGIDEGF--LNTCARRNALLSTSTPVPACYRK 947
Query: 520 --KDEKK-----ALLCRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASK 572
KDE++ RF+ +L+ +L +A Y + +Q + ++ F
Sbjct: 948 SQKDEQEWQRQLGTHRRFYATLLLHHLLKGMPLPILASTYKVNCGQIQQLQSTSTAFCGM 1007
Query: 573 VYRFCEELPELWCYKQLLTDLPQTLMYCRAPNLRALMDLP----GVKIGRARQLLNAGYS 628
V FC+ L W LT L + L AP+ A M G+ + A L +AG
Sbjct: 1008 VVGFCDRL-RCWALAAALTPLSEQLS-TGAPSFVAEMTSKLSHVGLPVSWAIALHSAGLE 1065
Query: 629 SLELIARAD 637
++ IA +D
Sbjct: 1066 TVTAIAGSD 1074
>gi|413916519|gb|AFW56451.1| hypothetical protein ZEAMMB73_683344 [Zea mays]
Length = 500
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 126/441 (28%), Positives = 215/441 (48%), Gaps = 31/441 (7%)
Query: 82 RGPILECVVSKVLYLKKSIQIFAMSATIGNI--NALSTFIEGITYVENSRPTKHSEYVTV 139
+ P ++ + + + + AT+ ++ +S Y + RP E++ V
Sbjct: 8 KAPSWRWTSARAVVIAANSDAWVADATLSSVLDPGISDTKLAALYQTDFRPVPLEEFIKV 67
Query: 140 DKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHL-----VQGNLMVLIFCSSKIACSN 194
++F ++ + D+ G PD ++ L +QG+ VL+FCSS+ C +
Sbjct: 68 GNQIFDK--DMNVVRVLPKVADHG--GKDPDHIVELCNEVVLQGH-SVLLFCSSRKGCES 122
Query: 195 LALRL-QFDRFP--GTKEYKKQ--EKEDLIEALKEENDGKLSTNLEECILYGVAYHHADL 249
A + +F + P GT + + + IEAL+ G L L E + +GVAYHHA L
Sbjct: 123 TARHVAKFLKLPSVGTTDVSSEFSDAAAAIEALRRCPAG-LDPILGETLPFGVAYHHAGL 181
Query: 250 TAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGRDFISLNMYKQMVGR 309
T ER ++E Y G ++++ TSTLAAGVNLPA+RVI R +GRDFI Y+QM GR
Sbjct: 182 TVEEREIVESCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPKIGRDFIDGTRYRQMAGR 241
Query: 310 AGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHM--DPPTLVDLILEVVAANLC 367
AGRTG+ GESI++C+ ++ R + ++ + P+ S + D + I+EVVA +
Sbjct: 242 AGRTGIDTKGESILVCRP-EEVKRVTGIIRSNCPPLESCLSEDKNGMTHAIMEVVAGGIV 300
Query: 368 SSLEDVKTLIKHTLFYQLKSPEDQQTFLETTLSEIVASLLASKGTMLTMNEAGHLSLTSI 427
+ D+ ++ TL + +D + +L L K + +E S T +
Sbjct: 301 QTANDIHRYVRCTLLNSTRPFDDVVKSAQDSL-----RWLCHKSFLEWNHETKIYSATPL 355
Query: 428 AKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEYRIPSDGILLSRSKVY 487
+AA + L+ + L++ DL + F L + LH+++LV P+ + D L Y
Sbjct: 356 GRAAFGSSLNPEESLVVLDDLSRAREGFVLASDLHLVYLVTPINVDLEPDWELY-----Y 410
Query: 488 DRYTKFHPQTLRVAEALGVTE 508
+++ + V +GV E
Sbjct: 411 EKFMQLSSLEQSVGNRVGVIE 431
>gi|298712112|emb|CBJ32993.1| ATP binding / ATP-dependent helicase/ DNA binding / DNA-directed DNA
polymerase/ helicase/ nucleic a [Ectocarpus siliculosus]
Length = 1533
Score = 175 bits (443), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 188/697 (26%), Positives = 311/697 (44%), Gaps = 101/697 (14%)
Query: 42 IYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSK-VLYLKKSI 100
+ ICT+EK + ++ L +E R+ + +V+DE H++ + RG +LE +++K L ++
Sbjct: 809 VAICTMEKANSIVNRLAEEKRLAALSAVVVDEMHLIGDRARGFLLELMLTKQRLLCPNNV 868
Query: 101 QIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQS-------------F 147
Q+ +SAT+ NI L+ +++ Y RP + +V + V++
Sbjct: 869 QLICLSATLPNIECLAKWLDASLYRTAYRPVELRHFVCQGRAVYRPTRIRGTGGGAAGGD 928
Query: 148 DGKSLTEIYADNLDY---SLTGSGPDAVLHLVQG----NLMVLIFCSSKIACSN----LA 196
D +L ++ ++ + + PD V+ LV+ ++ VL+FCS+K C LA
Sbjct: 929 DEGTLEKVVGGDIKRVGGTSPSADPDGVVDLVKDALARDMSVLVFCSTKKWCQQTATLLA 988
Query: 197 LRLQFDRFPGTKEYKKQEK----------EDLIEALKEENDGKLSTNLEECILYGVAYHH 246
+ DR + K E+ +D+ E L++ G L +L + G+A+HH
Sbjct: 989 KEVLSDRNRAAEGGKATERRRGASSPTTADDVREKLRQTPVG-LDADLSYLVGTGIAFHH 1047
Query: 247 ADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGRDFISLNMYKQM 306
+ L ER ++EEA+ G+++++ TSTLAAGVNLPA RVIIR VG + Y QM
Sbjct: 1048 SGLVVEERSILEEAFRQGSIRVLVATSTLAAGVNLPAHRVIIRSPSVGIGLLDSTRYHQM 1107
Query: 307 VGRAGRTGL---QESGESI------------MLCKTMQDFLRFSSMMNAGPEP-ISSHM- 349
GR+GR G+ +E G+++ +L K ++ L +S + + P P + S +
Sbjct: 1108 AGRSGRAGVSRGEEGGKAVQGVDTARGESFLILPKNVKFTLSDASKLISAPLPKLESALR 1167
Query: 350 --DPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQLKSPEDQQTFLETTLSEIV---- 403
+ L +LEV+ + +S E + TL + PED+ L+ S +
Sbjct: 1168 DAEGGGLERALLEVIVSMTVTSREGARRFSCKTLL-AAQIPEDE--VLKACDSAMAYLLK 1224
Query: 404 ASLLASKGTMLTMNEAGH-LSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLH 462
+ + +G A + ++ T + +A +GLS + ++ L NF + + LH
Sbjct: 1225 HNFVVQRGGDSVEGCADYDVAPTQLGRATFFSGLSPSAAVDVFESLDKACQNFAVASDLH 1284
Query: 463 MLFLVIPLEYRIPSDGILLSRSKVYDRY---TKFHPQTLRVAEALGVTENLV---ALNVT 516
L LV PL DGI + + + Y + P + V E +GV ++ A N
Sbjct: 1285 ALVLVTPL------DGIEPNWGRFREEYLACSTDDPVRV-VGELIGVELGVLVGAAGNTA 1337
Query: 517 GKLKDEKKAL--------------LCRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNF 562
K + R + A +L + + +A GI+ LQ
Sbjct: 1338 PKYGQRSYEVSRGSNHHRMVDLQPYRRLYGAMLLQQAVEEVPVRNMAGRLGIERGALQAL 1397
Query: 563 LNVTSYFASKVYRFCEELPELWCYKQLLTDLPQTLMYCRAPNLRALM----DLPGVKIGR 618
S F V FC L + +L L Y P L L+ DLP R
Sbjct: 1398 QKEASVFCGMVVCFCRHL-QWHELANVLYSFQDRLGYSAKPELLPLVRLSRDLPPF---R 1453
Query: 619 ARQLLNAGYSSLELIARADAKEMVAKI--RHLPLRSA 653
AR LL AGY S +A ADA VA + R P RSA
Sbjct: 1454 ARALLKAGYPSPLELATADASR-VADVLLRCAPFRSA 1489
>gi|86563272|ref|NP_498250.3| Protein POLQ-1 [Caenorhabditis elegans]
gi|373220425|emb|CCD73325.1| Protein POLQ-1 [Caenorhabditis elegans]
Length = 1661
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 178/678 (26%), Positives = 285/678 (42%), Gaps = 109/678 (16%)
Query: 44 ICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKS---- 99
+CTIEK + L + E+ +EIG+IV+DE HM+ + RG +E ++SKVL +S
Sbjct: 121 VCTIEKAASLTNRALSEDWFEEIGMIVVDEMHMVFDSSRGAHIEHMLSKVLLWNQSALEK 180
Query: 100 IQIFAMSATIGNINALSTFIEGITYVENS-RPTKHSEYVTVDKRVFQSFDGKSLTEIYAD 158
++I MSATI + + +++G E RP ++ + + +S D K L E D
Sbjct: 181 VRIIGMSATIPELYRIGKWLDGAKVFEARFRPIVLQNHIVIGSELRKSGDNKVLREFSED 240
Query: 159 NLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDL 218
L S + N L+ SSK+ AL + RF E K + L
Sbjct: 241 PLILLTEES--------FRRNSQTLVMISSKLDAEKTALNIA-SRF---HEINKTDS-SL 287
Query: 219 IEALKEENDGKL------------STNLEECILYGVAYHHADLTAGERRLIEEAYLAGTL 266
+E LKE +G L N+ + +GVAYHHA LT ER IE + +
Sbjct: 288 LEILKERANGLLFIKHGLERNGCKDRNVMSTLAWGVAYHHAGLTMEERECIELGFREKNI 347
Query: 267 QIICCTSTLAAGVNLPAQRVIIRDSYVGRDFISLNMYKQMVGRAGRTGLQESGESIML-- 324
I+ TSTLA+GVNLPA+RV+I+ G ++ Y+QMVGRAGRTG GE+ +L
Sbjct: 348 VILVATSTLASGVNLPAERVLIKAQPRGPSALTSLNYRQMVGRAGRTGHATRGETYLLIK 407
Query: 325 -CKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFY 383
C + ++ G + L ILE + L ++ + L K LF
Sbjct: 408 KCDRDAVLKIIETPIDQGVLTRKRDAERTNLSRFILEGICTGLTTTRSQIHDLCKLLLF- 466
Query: 384 QLKSPEDQQTFLETTLSEIVASLLASKGTMLTMNEAGHLSLTSIAKAAVQAGLSHDVCLI 443
+ E+ Q LS+I +L + LS T + +AA+ + L + L
Sbjct: 467 ---NSENLQ------LSDIAIEMLLRNSFISQDENDDQLSPTQLGRAAIASSLPPEASLA 517
Query: 444 IYSDLLHNKLNFCLLNSLHMLFLVIPLEYRIPSDGILLSRSKVYDRYTKFHPQTLRVAEA 503
I+ DL L LHML+LV Y+ I+ K+Y + + L
Sbjct: 518 IFEDLNSASRAIALDTELHMLYLV--YFYKNSRAQIIQKIFKIYSIFILKKFKNLEPKFK 575
Query: 504 LGVTENLVALNVTGKLKDEKKAL-----------LCRFFHACILYDVLNFDNHQKVAKMY 552
++EN + +++T ++ ++ C + H ++ L D H+++AK+
Sbjct: 576 KKISEN-ITVHITNSIRKKQHFWHVTPINVSVWQECDWHHLFSIFSKLPSD-HKRIAKLV 633
Query: 553 GIQN----------------------------------------SH--------LQNFLN 564
G+ SH LQ +
Sbjct: 634 GVSEKFILDQLQGRRNDKLLQIHIRFFSALALFDLISEMSIYEVSHKYRIPRGCLQTLQS 693
Query: 565 VTSYFASKVYRFCEELPELWCY-KQLLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLL 623
++ +A+ + FC L W Y K LL L++ L L+ + G+ RAR L
Sbjct: 694 QSATYAAMIVAFCLRLG--WTYLKALLDGFATRLLFGVRSELSELVAIEGIDGQRARILH 751
Query: 624 NAGYSSLELIARADAKEM 641
G + L ++ D+ ++
Sbjct: 752 ERGVTCLSHLSACDSSKL 769
>gi|302348720|ref|YP_003816358.1| ski2-type helicase [Acidilobus saccharovorans 345-15]
gi|302329132|gb|ADL19327.1| Putative ski2-type helicase [Acidilobus saccharovorans 345-15]
Length = 724
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 174/630 (27%), Positives = 293/630 (46%), Gaps = 77/630 (12%)
Query: 37 LNKKSIYICTIEKGSKLIGSLIQENR--IDEIGLIVIDEFHMLNEPQRGPILECVVSKVL 94
+N+ + I T EK + S+I+ + ID++G +V+DE H +++ +RGPI+E ++SKVL
Sbjct: 107 VNRNDVIITTYEK----LDSIIRNSPSIIDKMGSLVVDEIHYVDDEKRGPIIETLLSKVL 162
Query: 95 YLKKSIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTE 154
Y + +Q+ A+SAT+ N++ ++ +I N RP SE V D + S K E
Sbjct: 163 YRSRGVQVVALSATVSNVDEIANWIGAKLVKCNWRPVPLSEGVYKDGVIHFSDGSKRKVE 222
Query: 155 IYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSK---IACSNLALRLQFDRFPGTKEYK 211
+ N +L V QG L+F S+ + + +A RL + K +
Sbjct: 223 EVSANPSINLV------VDESRQGG-QTLVFVQSRRRAVQLAKMAARLPRNLL---KFNQ 272
Query: 212 KQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICC 271
+ +E + L E L + E I+ GV+YHHA L+ +R LIE+A+ G L I
Sbjct: 273 GKAREYAAKILATEGPRLLREEIAELIMSGVSYHHAGLSNEQRTLIEDAFRDGALAAIFA 332
Query: 272 TSTLAAGVNLPAQRVIIR------DSY-VGRDFISLNMYKQMVGRAGRTGLQESGESIML 324
T TLAAGVNLPA+RV+I +SY V RD I + YKQ GRAGR GL GE+I++
Sbjct: 333 TPTLAAGVNLPARRVVIAEVERYDESYGVPRD-IKVFEYKQFAGRAGRPGLDPYGEAIIV 391
Query: 325 C---KTMQDFLRFSSMMNAGPEPISSHMDPPTLVD-LILEVVAANLCSSLEDVKTLIKHT 380
+++++ + + A PE + S + V L VA+ + + + L + T
Sbjct: 392 ASRPRSVRELM--EEYIKAKPERLESRLYGVRGVRHSALGAVASGIANDFGSLLELHRKT 449
Query: 381 LFYQLKSPEDQQTFLETTLSEIVA-SLLASKGTMLTMNEAGH-LSLTSIAKAAVQAGLSH 438
L+Y + E L +L ++VA L+ L G+ +S T + A+V
Sbjct: 450 LYYVQRGEEKLSQILRISLDDLVAWGLVEETNGKLKATHLGYVVSRTYLDPASVPK---- 505
Query: 439 DVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEYRIPSDGILLSRS----KVYDRYTKFH 494
L+ + + K + +++++ +P +L RS K+ D
Sbjct: 506 ---LVKLAKRFNGK-----FTTEGLIYII----SSMPDMNLLPVRSSESEKIMDMAVDRV 553
Query: 495 PQTLRVAEALGVTENLVALNVTGKLKDEKKALLCRFFHACILYDVLNFDNHQKVAKMYGI 554
P + + + +++ AL T L D + K+A+ Y +
Sbjct: 554 PTLIDIVD-WDDPDSVAALKTT-----------------LALLDWIEEVPDDKIAETYDV 595
Query: 555 QNSHLQNFLNVTSYFASKVYRFCEE--LPELWCYKQLLTDLPQTLMYCRAPNLRALMDLP 612
+ + ++ + AS + LPE K L L + + P L L+++P
Sbjct: 596 GPGDVASIIDTAKWIASSLAEVAPAAGLPEEVSEKLRL--LSKRIEEGVKPELLQLVEIP 653
Query: 613 GVKIGRARQLLNAGYSSLELIARADAKEMV 642
GV RAR+L NAG+ +LE +A A +E++
Sbjct: 654 GVGRVRARRLYNAGFKTLESLATASPQELL 683
>gi|134046307|ref|YP_001097792.1| DEAD/DEAH box helicase domain-containing protein [Methanococcus
maripaludis C5]
gi|132663932|gb|ABO35578.1| DEAD/DEAH box helicase domain protein [Methanococcus maripaludis
C5]
Length = 707
Score = 171 bits (434), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 166/636 (26%), Positives = 304/636 (47%), Gaps = 66/636 (10%)
Query: 14 EEFKFYLEEYA---GVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIV 70
EEFK E+Y G+ +K LNK + I T EK LI I + + ++ +V
Sbjct: 83 EEFKEKYEKYGLKIGISIGDFDSKEDLNKYDLIITTSEKLDSLIRHKI--DWLKDVSCVV 140
Query: 71 IDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVENSRP 130
+DE H++ + +RG LE V++ + L ++QI +SAT+GN L+ ++ ++ RP
Sbjct: 141 VDEIHLIGDGERGATLEVVLTILKTL--NLQIIGLSATVGNPGELADWLNAKLIIDTWRP 198
Query: 131 TKHSEYVTVDKRV-FQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSK 189
+ + + + + + + K + + + L+ + V+ + LIFCSSK
Sbjct: 199 IELRKATFFENVIEYTNSEEKKVENEHKNPLN--------NLVIDTAKEEGSCLIFCSSK 250
Query: 190 IACSNLALRLQFDRF--PGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHA 247
A + ++ P E + EDL+E+ +++GK L +C+ G+A+HHA
Sbjct: 251 RNAVGEAKKHDVRKYLHPLEIEKLNEVAEDLLES---DSEGKTVKTLSDCVRKGIAFHHA 307
Query: 248 DLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRD----SYVGRDFISLNMY 303
LT +R+++E AY +++ICCT TL+AG+NLP +R IIRD S G FI +
Sbjct: 308 GLTTKQRKIVETAYKNRIVKVICCTPTLSAGLNLPCRRAIIRDVKRFSEKGMKFIPVMEI 367
Query: 304 KQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHM-DPPTLVDLILEVV 362
+Q +GRAGR GL GE I++ K D +++N PE I S + + +L +L ++
Sbjct: 368 QQCIGRAGRPGLDPYGEGIIVLKKKGDITEALNLLNGDPEHIYSGIANYKSLEKHVLGLI 427
Query: 363 AANLCSSLEDVKTLIKHTLFYQLKSPEDQQTFLETTLSEIVASLLASKGTMLTMNEAGHL 422
A+++ + ++ +K+T FY + + Q+ ++ T+ EI L K L E L
Sbjct: 428 ASDITRTKTELFKFLKNT-FYAYQYDDFQK--IKRTVEEI---LFDFKNAKLLRPENEIL 481
Query: 423 SLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEYRIPSDGILLS 482
+T++ C + ++L +++H+L + LE D ILL+
Sbjct: 482 EVTALG------------CRV-------SELYISPSSAIHILNGLAGLEDYSFEDHILLT 522
Query: 483 RSKVYDRYTKFHPQTLRVAEALGVTENLVALNVTGKLKDEKKALLCRFFHACILYDVLNF 542
S ++ K LR+ + N L G D++ L+ FF++ + ++
Sbjct: 523 LSGTHEMKPK-----LRMPDNDSDIRN--ELESLGYESDDE--LIDDFFYSRLFKAWISE 573
Query: 543 DNHQKVAKMYGIQNSHLQ---NFLNVTSYFASKVYRFCEELPELWCYKQLLTDLPQTLMY 599
+ +++ + Y ++ L+ +N Y A ++ R L + W +++ L Y
Sbjct: 574 KSDEEIHEHYAVEPGILRYKLEQMNWMMYSAKELLRISGNLKDYW---NEFSNIDVRLKY 630
Query: 600 CRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIAR 635
+ L L+ + G+ +AR+L + G S E I +
Sbjct: 631 GASEELVELLKIKGIGRVKARKLYDVGLKSREDIKK 666
>gi|303271985|ref|XP_003055354.1| helicase/polymerase domain-containing protein [Micromonas pusilla
CCMP1545]
gi|226463328|gb|EEH60606.1| helicase/polymerase domain-containing protein [Micromonas pusilla
CCMP1545]
Length = 1996
Score = 171 bits (434), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 187/806 (23%), Positives = 312/806 (38%), Gaps = 202/806 (25%)
Query: 23 YAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQR 82
Y G G PP R ++ + +CT EK + ++ LI+++R+ ++ +V+DE HM+ + R
Sbjct: 425 YGGRGGALPP--RDSKERVLLVCTPEKANDVVSKLIEDDRVRDLAAVVVDELHMVQDESR 482
Query: 83 GPILECVVSKVLYLKK-------------------------------------------- 98
G LE +++K+L+
Sbjct: 483 GSTLELMLTKLLFASSKAAAAAIAAENVSPSSDGGDGGKGAGSREPLSASSRGSKSAAAA 542
Query: 99 ------SIQIFAMSATIGNINALSTFIEGIT-YVENSRPTKHSEYVTVDKRVF------- 144
+ QI MSAT+ N++ L+ +++ YV + RP + + V+
Sbjct: 543 AAAAKRTPQIIGMSATLPNVDGLAKWLDDAALYVTDYRPVALRLSIKLGSDVYPLPSREE 602
Query: 145 --------------------QSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLI 184
D + ++ + +D G G V++
Sbjct: 603 EVEDGEDDDVLSERRKVSLKDGDDASHVAQLAQETMDRGAVGGG-------------VIV 649
Query: 185 FCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEA-LKEENDGKLSTN----LEECIL 239
FCS+K C +A R+ + + + + D I A L+ N T L +
Sbjct: 650 FCSAKFQCEVMA-RMLSKKLRVDADARASDGLDRISASLRNVNPNATDTANRPALATTVA 708
Query: 240 YGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGRD--- 296
GVA+HHA L A E+RL+E+ + +G +++ICCTST+AAGVNLPA RVII Y+ R
Sbjct: 709 NGVAWHHAALHAEEKRLVEDGFRSGAIRVICCTSTMAAGVNLPASRVIIAHPYIYRQKPA 768
Query: 297 ---FISLNMYKQMVGRAGRTGLQESGESIMLCKTMQ----DFLRFSS------------- 336
+S KQ GRAGR GL + GE+ ++ DF
Sbjct: 769 RHALLSSRDLKQAAGRAGRAGLADRGEAFVVVPEPSEIDCDFAAGGGGGGGGGKSKAKSK 828
Query: 337 ----------MMNAGPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQLK 386
+++ G + +SS + + ++LE +A L S DV+ I+ TL L
Sbjct: 829 AALARELARRLLSEG-DALSSTIAGERMRRVMLEALAGGLVKSARDVQCYIQCTLLNALN 887
Query: 387 SPEDQQTFLETTL--SEIVASLLASKGTMLTMNEAGHLSLTSIAKAAVQAGLSHDVCLII 444
F E T ++ + LA +G M + + + + +AA D +
Sbjct: 888 D------FQEVTARGAKDALAWLAQRGFMSWNEKTAEYTPSPLGRAAAAGRFEPDEAAAV 941
Query: 445 YSDLLHNKLNFCLLNSLHMLFLVIPLEYRIP---------------------SDGILLSR 483
+ + L + LH+LFL +P + P I+ +R
Sbjct: 942 VDVVKRARRGLNLESDLHLLFLCVPPDPPAPMDVDADGGGGGARAAKDDPLSPASIVAAR 1001
Query: 484 SK--------------------VYDRYTKFHPQTLRVAEALGVTENLV-ALNVTGKLK-- 520
+K VYD T+ VA GV ++ L ++ + K
Sbjct: 1002 NKPVAPPKTDTTCRLNPTAFVSVYDNLTEHEHD---VATRCGVLDSYARQLKMSKRDKTP 1058
Query: 521 -DEKKALLC-RFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFA---SKVYR 575
D +C RF A L D++ + +A+ + +N N SY A + R
Sbjct: 1059 EDRASRRVCHRFMKALQLRDLVAERDVADIARAFS-ENGKDANVNGFASYLAQLQEQAVR 1117
Query: 576 FCEEL-----PELWC-YKQLLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSS 629
+ ++ P W + LL L + + +L +P + GRAR L NAGY S
Sbjct: 1118 YAGQVAALCGPMGWGDVEVLLARLQDRIAAGAREEIVSLTQIPMISAGRARALYNAGYRS 1177
Query: 630 LELIARADAKEMVAKIRHLPLRSARN 655
E I R D K++ ++ R AR
Sbjct: 1178 PEAILRLDQKKLAGVLKQ--CRGARG 1201
>gi|429216875|ref|YP_007174865.1| superfamily II helicase [Caldisphaera lagunensis DSM 15908]
gi|429133404|gb|AFZ70416.1| superfamily II helicase [Caldisphaera lagunensis DSM 15908]
Length = 706
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 179/660 (27%), Positives = 300/660 (45%), Gaps = 76/660 (11%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+ +KY+ K EE + + G + PP K I I T E+ +I +
Sbjct: 74 IASQKYREF-KRVEEMGYKVRLSIGDYEEGPP------KSDILITTYERLDSIIRN--SP 124
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIE 120
N ++EIG +VIDE H +++ +RGP+LE ++SK+LY +QI A+SAT+ N +S +I
Sbjct: 125 NILNEIGSVVIDEVHYVDDEKRGPVLETLISKILYKNPELQIVALSATVPNAEEISKWIN 184
Query: 121 GITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNL 180
RP E V D + + DGK+ EI + S+ D ++
Sbjct: 185 SDLVYSTWRPVPLYEGVYKDG-LIKFIDGKT-KEIETIAKEPSI-----DLIIDESNQGG 237
Query: 181 MVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGK-LSTNLEECIL 239
L+F S+ LA + F +Y K ++ + + N + L L + IL
Sbjct: 238 QSLVFSQSRKRVVQLAKK--SSSFYQYYKYDKNLAKNFSKKILSTNGPRSLREELSQLIL 295
Query: 240 YGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVG----R 295
GVAYHHA L+ +R ++EEA+ + I T TLAAGVNLPA+RVI+ + Y R
Sbjct: 296 KGVAYHHAGLSNEQRSIVEEAFERNAITAIFATPTLAAGVNLPARRVIVEEYYRFERGYR 355
Query: 296 DFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLR-FSSMMNAGPEPISSHMDP-PT 353
I ++ YKQ+ GRAGR GL GE+I+ K +F F + E + S +
Sbjct: 356 SPIKVSEYKQLAGRAGRPGLDPYGEAIIAAKKSDEFEDLFQIYIKGNLERLESKLSGLKG 415
Query: 354 LVDLILEVVAANLCSSLEDVKTLIKHTLFYQLKSPEDQQTFLETTLSEIVASLLASKGTM 413
L +L VA+ + + E + L K TL+Y + + L+T + +++ L ++
Sbjct: 416 LRHSVLGAVASGIANDYESIYELHKKTLYYIQRGEKTITQLLKTAIKQLIDWELINE--- 472
Query: 414 LTMNEAGHLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLN-FCLLNSLHMLFLVIPLEY 472
E L T++ + L + I L N LN +N +L+++ +
Sbjct: 473 ----ENKKLIPTNLGYVTSKTYLDPESIPI-----LKNILNKIKKINETLILYIISSMPD 523
Query: 473 RIPSDGILLSRS---KVYDRYTKFHPQTLRVAEALGVTENLVALNVTGKLKDEKKALLCR 529
P ++++S K+ DR + P+ + + + +G DE + +
Sbjct: 524 INP---FIVNKSEEDKIMDRVIEDAPELIDIIDWMG--------------PDEVEIIKTM 566
Query: 530 FFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELWCYKQL 589
F +L D +N + K+++ Y I L + + + + CE L L
Sbjct: 567 F----VLKDWINEVSEDKISENYNIGPGDLASLTDNAKWVTRSLGEICEVL-------GL 615
Query: 590 LTDLPQ--TLMYCRAPN-----LRALMDLPGVKIGRARQLLNAGYSSLELIARADAKEMV 642
+D+ L+ R N L L+++P V RAR+L NAGY +L +A A+ K+++
Sbjct: 616 PSDVVGQFKLLEKRIENGVKTELLELVNIPEVGRVRARKLYNAGYKNLASLATANPKDLL 675
>gi|312072727|ref|XP_003139197.1| hypothetical protein LOAG_03612 [Loa loa]
gi|307765639|gb|EFO24873.1| hypothetical protein LOAG_03612 [Loa loa]
Length = 412
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 115/334 (34%), Positives = 176/334 (52%), Gaps = 32/334 (9%)
Query: 4 EKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRI 63
EK+ +L K + + G Q P ICTIEK + L+ +I E I
Sbjct: 86 EKFLTLQKIWRRVDLRVSAFMG--SQTSP----FQAWDASICTIEKANSLLNRMIDEKTI 139
Query: 64 DEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKK-SIQIFAMSATIGNINALSTFIEGI 122
+IG++VIDEFHML + RGP++E +V KVLY+ + IQI +SAT+ N++ L+ ++
Sbjct: 140 FDIGVLVIDEFHMLFDGNRGPLVEHIVGKVLYISRHRIQIIGLSATLPNLDELADWLNAE 199
Query: 123 TYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLM- 181
Y RP + E + D Q D +L I + ++++ +++HL +++
Sbjct: 200 KYETQFRPIQLHEMIMCDS---QLRDVNTLQCIRTISSEFTVPNDIEHSIIHLCTESVVK 256
Query: 182 ---VLIFCSSKIACSNLALRL--QFDRFPGTKEYKKQEKEDLI--------EALKEENDG 228
VL+FCSSK LAL + F + +K ++LI EA+K+
Sbjct: 257 GESVLVFCSSKAETEKLALAISHHFGDY-----FKSSNNQNLISSLNIQSLEAVKQAFHH 311
Query: 229 KL---STNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQR 285
++ L++ I YG+A+HHA LT ER IE A+ L+I+C TSTL++G+NLPA R
Sbjct: 312 EVQFVDDILQKTIPYGIAFHHAGLTVEERESIENAFHEQLLRIVCATSTLSSGINLPAHR 371
Query: 286 VIIRDSYVGRDFISLNMYKQMVGRAGRTGLQESG 319
VII+ G ++ Y QM+GRAGR G E G
Sbjct: 372 VIIKAQMCGPVALNGLTYMQMIGRAGRLGQTEKG 405
>gi|347842514|emb|CCD57086.1| hypothetical protein [Botryotinia fuckeliana]
Length = 805
Score = 171 bits (432), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 107/339 (31%), Positives = 177/339 (52%), Gaps = 31/339 (9%)
Query: 42 IYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQ 101
I +CTIEK + L+ + I E I +G++++DE H +N+ RG ILE + +K+L L++ +Q
Sbjct: 462 IAVCTIEKANSLVNAAIDECSIGNLGVVIMDEIHFINDESRGYILELMATKLLSLEQGVQ 521
Query: 102 IFAMSATIGNINALSTFIEGIT-YVENSRPTKHSEYVTVDKRVFQSFDG----KSLTEIY 156
I MSAT+ N + L+ ++ Y+ N R E++ + V+ + K+ +++
Sbjct: 522 IVGMSATLDNADLLAKWLNNAKFYISNYRAVPVEEHLVFENAVYPASSSNRFYKTASQLN 581
Query: 157 ADNLDYS------------------LTGSGPDAVLHLV----QGNLMVLIFCSSKIACSN 194
+ NL S L+ ++V+ L + VL+FCSS++ C
Sbjct: 582 SQNLGNSTQVPPEPHRRIQTSQHKELSNPLINSVVALANETARSGYGVLVFCSSRLGCER 641
Query: 195 LALRLQ--FDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAG 252
AL + + DL+ L++ + G L LE+ +L GVA+HHA LT
Sbjct: 642 DALLISQVLPSMDAIDPLLMNRRRDLLNDLRDTSSG-LDQVLEKTVLMGVAFHHAGLTTE 700
Query: 253 ERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGRDFISLNMYKQMVGRAGR 312
ER L+ AY G L+++ T +LAAG+NLPA+RVI+ + +G D + +M +QM GRAGR
Sbjct: 701 ERDLVAAAYDEGVLKVMVATCSLAAGINLPARRVILHGARMGSDLVGPSMLRQMRGRAGR 760
Query: 313 TGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDP 351
G E GE+ + C+ D + +M A + S + P
Sbjct: 761 KGKDEIGETYLCCQK-SDLEAVAELMEAEIPSVESCLVP 798
>gi|170056636|ref|XP_001864119.1| DNA polymerase theta [Culex quinquefasciatus]
gi|167876216|gb|EDS39599.1| DNA polymerase theta [Culex quinquefasciatus]
Length = 482
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 117/349 (33%), Positives = 185/349 (53%), Gaps = 38/349 (10%)
Query: 28 GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILE 87
G PP + + +CTIEK + ++ L+++ ++ +GL+V+DE H++++P RG ILE
Sbjct: 51 GHTPPGG--FDSVDVAVCTIEKANSIVNRLLEQQKLSSVGLVVVDEVHLISDPSRGYILE 108
Query: 88 CVVSKVLYLKKS------IQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDK 141
+++K+ ++ + IQI AMSAT+ N+ L ++ + + RP + E V +
Sbjct: 109 LLLTKIRFVGERLADETRIQIVAMSATLPNMGLLVDWLGAEQFRTDFRPIELREMVKMGN 168
Query: 142 RVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLM----VLIFCSSKIACSNLAL 197
+F + K L ++ ++ G D V L ++ V++FC SK C LAL
Sbjct: 169 CIFDR-EKKLLRKLEVG--EFGEVGRDQDQVAQLCLETILEGCSVIVFCPSKDWCEKLAL 225
Query: 198 RLQFDRFPGTKEYKK-QEKEDLIEALKEEND-GK--------------LSTNLEECILYG 241
L G YK + K +L E ++ + D GK L L + YG
Sbjct: 226 HL------GEFIYKSLKVKGELGEKMRLQMDPGKMEQALARLKNSPVGLDPVLGKTARYG 279
Query: 242 VAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGRDFISLN 301
YHHA LTA ER +IE + GTL++I TSTL++GVNLPA+RVIIR G ++
Sbjct: 280 CVYHHAGLTADERDIIESCFREGTLRVIVATSTLSSGVNLPARRVIIRTPMFGGAPMNAL 339
Query: 302 MYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMD 350
Y+QM+GRAGR G GESI++C Q+ ++ A +PI+S +D
Sbjct: 340 TYRQMIGRAGRKGRDVLGESILMCDG-QNARAGWELVRAELKPIASCLD 387
>gi|390475462|ref|XP_002807658.2| PREDICTED: DNA polymerase theta-like [Callithrix jacchus]
Length = 2414
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 116/367 (31%), Positives = 192/367 (52%), Gaps = 57/367 (15%)
Query: 13 AEEFKFYLE---EYAGVK-----GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRID 64
A+E K+YL+ + G+K G P R + + +CTIE+ + LI LI+EN++D
Sbjct: 156 AKEKKYYLQSLFQEVGIKVDGYMGSTSPA-RHFSSLDVAVCTIERANGLINRLIEENKMD 214
Query: 65 EIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKK---------------SIQIFAMSATI 109
+G++V+DE HML + RG +LE +++K+ Y+ + ++QI MSAT+
Sbjct: 215 LLGMVVVDELHMLGDSHRGYLLELLLTKICYISRKTASSQADLASSLSNAVQIVGMSATL 274
Query: 110 GNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSF-----DGKSLTEIYADNLDYSL 164
N+ +++++ Y + RP E V V ++ S + + + ++ D
Sbjct: 275 PNLEVVASWLNAELYHTDFRPVPLLESVKVGNSIYDSSVKLVREFQPMLQVKGDE----- 329
Query: 165 TGSGPDAVLHL----VQGNLMVLIFCSSKIACSNLA---------LRLQFDRFPGTKEYK 211
D V+ L ++ N VL+FC SK C LA L Q + + E+
Sbjct: 330 -----DHVVSLCYETIRDNHSVLLFCPSKKWCEKLADIIAREFYNLHHQAEGLVKSSEFP 384
Query: 212 KQ--EKEDLIEALKEEN--DGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQ 267
E++DL+E + + L + L++ + +GVA+HHA LT ER +IE A+ G ++
Sbjct: 385 PVILEQKDLLEVMDQLRCLPSGLDSVLQKTVPWGVAFHHAGLTFEERDIIEGAFRQGLIR 444
Query: 268 IICCTSTLAAGVNLPAQRVIIRDSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKT 327
++ TSTL++GVNLPA+RVIIR G + + YKQMVGRAGR G+ ++ + T
Sbjct: 445 VLAATSTLSSGVNLPARRVIIRTPIFGGRPLDILTYKQMVGRAGRKGV-DTVTPMFEDWT 503
Query: 328 MQDFLRF 334
D+ RF
Sbjct: 504 TIDWYRF 510
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 83/173 (47%), Gaps = 10/173 (5%)
Query: 490 YTKFHPQTLRVAEALGVTENLVALNVTGKL------KDEKKALLCRFFHACILYDVLNFD 543
+ K RVAE +GV E +A V GK+ + + A+ RFF + +L D+++
Sbjct: 514 WEKLPTSMKRVAELVGVEEGFLARCVKGKVVARTERQHRQMAIHKRFFTSLVLLDLISEV 573
Query: 544 NHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELWCYKQ-LLTDLPQTLMYCRA 602
+K+ + YG +Q+ + +A + F L W + LL+ + L +
Sbjct: 574 PLRKIIQKYGCNRGQIQSLQQSAAVYAGMITVFSNRLG--WHNMELLLSQFQKRLTFGIQ 631
Query: 603 PNLRALMDLPGVKIGRARQLLNAGYSSLELIARADAKEMVAKIRH-LPLRSAR 654
L L+ + + RAR L +G+ ++ +ARA+ E+ +++ +P +SAR
Sbjct: 632 RELCDLIRVSLLNAPRARVLYASGFLTVADLARANIAEVEMILKNAVPFKSAR 684
>gi|428179719|gb|EKX48589.1| hypothetical protein GUITHDRAFT_162401 [Guillardia theta CCMP2712]
Length = 2380
Score = 169 bits (428), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 120/373 (32%), Positives = 201/373 (53%), Gaps = 41/373 (10%)
Query: 42 IYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLY-LKKSI 100
+ ICTIEK S ++ L+ E + +E+G +V+DE ML + RG ++E +++KVL+ L ++
Sbjct: 304 LSICTIEKASSIVNQLLVEKKGEELGAVVVDEAQMLGDVGRGCLVEILLTKVLFSLSSTV 363
Query: 101 QIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYAD-N 159
QI +SAT+ N+ L+ ++E YV + RP E+V V+ +V + GK + E+ +
Sbjct: 364 QIICLSATVANMEELAMWLEAELYVSDFRPVPLLEHVVVELKV-EDKGGKVVRELQGGRH 422
Query: 160 LDYSLTGSGPDAVLHLVQGNL----MVLIFCSSKIA---CSN-LALRLQFDR-----FPG 206
+D D ++ L + L L+FCS++ + C+ +A LQ DR
Sbjct: 423 VDR-------DGIVMLCEEALAQSQTALVFCSTRRSAEMCAKFVADNLQGDRQEGEEGGE 475
Query: 207 TKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTL 266
++ K+ ++E ++EAL+ + G + L++ I GVA+HHA +T ER ++E A+ G +
Sbjct: 476 EEKRKRAKRESMLEALRN-SAGGVDQVLQQTIRAGVAFHHAGMTVEERMVVESAFRGGDV 534
Query: 267 QIICCTSTLAAGVNLPAQRVIIRDSYVGRDFISLNMYKQM----VGRAGRTGLQESGESI 322
I+ CTSTLAAGVNLPA RVI R ++G DF+ +N Y+QM G +GES
Sbjct: 535 SILMCTSTLAAGVNLPADRVIFRSPFIGCDFLDVNRYRQMAGRAGRAGRGGGAGGAGESF 594
Query: 323 MLCKTMQDFLRFSSMMNAGPEPISSHM---------DPPTLVDL---ILEVVAANLCSSL 370
++C+ +D R +++ P+ S + P L L ILE + L
Sbjct: 595 VVCER-KDAGRVRALLAGKLPPVCSRLVDREMWGRRRPLALSGLRRAILEALDNELVREE 653
Query: 371 EDVKTLIKHTLFY 383
E+V ++ + Y
Sbjct: 654 EEVMRFLRKSFLY 666
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 113/265 (42%), Gaps = 22/265 (8%)
Query: 395 LETTLSEIVASLLASKGTMLTMNEAGHLSL--TSIAKAAVQAGLSHDVCLIIYSDLLHNK 452
L + E + L AS + AG + T + KAAV++G+S + ++ DL
Sbjct: 749 LRQMMQEALRWLFASNMSRRQGTRAGEVIFFCTHLGKAAVRSGMSPEDAAMVQEDLKEAM 808
Query: 453 LNFCLLNSLHMLFLVIPLEYRIPSDGILLSRSKVYDRYTKFHPQTLRVAEALGVTENLV- 511
+ + + LH+LFLV PL SD + + ++D + P R+AE +GV E +
Sbjct: 809 SSLAMEDDLHLLFLVSPL-----SD-LSVPWPHLFDIFQSLPPPCRRIAERVGVQERFLM 862
Query: 512 --ALNVTGKLKDEKKALLC---------RFFHACILYDVLNFDNHQKVAKMYGIQNSHLQ 560
L+ + C RFF A IL D+L VA + + +Q
Sbjct: 863 RARLHGVSSSSSSSSSSSCWQRALQIHSRFFCALILRDLLLERKIPDVALKFHVPRGRVQ 922
Query: 561 NFLNVTSYFASKVYRFCEELPELWCYKQLLTDLPQTLMYCRAPNLRALMDLPGVKIGRAR 620
+ FA V FC L W + L +L + + + ++ L+ P +K AR
Sbjct: 923 QLQEEAAAFAGTVSSFCARL-RWWQLQVLTAELQERMRASVSSDVLLLLRCPSMKSWWAR 981
Query: 621 QLLNAGYSSLELIARADAKEMVAKI 645
L+ G SL+ + A A VA++
Sbjct: 982 GLVEEGIGSLKALG-AAAVGRVARV 1005
>gi|435849690|ref|YP_007301631.1| superfamily II helicase [Methanomethylovorans hollandica DSM 15978]
gi|433663178|gb|AGB50603.1| superfamily II helicase [Methanomethylovorans hollandica DSM 15978]
Length = 769
Score = 169 bits (428), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 117/363 (32%), Positives = 185/363 (50%), Gaps = 21/363 (5%)
Query: 28 GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILE 87
G Y R L K +I +CT EK L+ S + + ID++ +VIDE H+L RGP LE
Sbjct: 102 GDYNTDNRWLEKCNIIVCTAEKADSLLRS--EASWIDDVTCVVIDEVHLLACKTRGPTLE 159
Query: 88 CVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSF 147
V +K+ IQ ++SAT+GN ++ +++ + RP D R F
Sbjct: 160 MVTTKLREKNSQIQFVSLSATVGNAEEVARWLQSELITTDWRP--------ADLREGIFF 211
Query: 148 DGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRLQFDRFPGT 207
K Y+ +++ + + V L+F +S+ +CS+ A +L P
Sbjct: 212 QNKIQFSKYSIDINPITNDPSINIAIDTVNIGGQCLVFETSRNSCSDFAKKLSKHISPLI 271
Query: 208 KEYKKQEKEDL-IEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTL 266
E ++E L IE +EE + L ECI GVA+HHA L +R ++E + G +
Sbjct: 272 TEKNREELNKLSIELDREEQSNPI---LSECIRNGVAFHHAGLNEKQRDIVESGFKNGLI 328
Query: 267 QIICCTSTLAAGVNLPAQRVIIR-----DSYVGRDFISLNMYKQMVGRAGRTGLQESGES 321
+II CT TLAAG+NLPA+RVIIR + GR I + YKQM GRAGR L GES
Sbjct: 329 KIITCTPTLAAGLNLPARRVIIRNYKRFNPGQGRCPIPVLDYKQMAGRAGRPHLDPYGES 388
Query: 322 IMLCKTMQDFLRF-SSMMNAGPEPISSHMDPPTLVDL-ILEVVAANLCSSLEDVKTLIKH 379
+++ ++ +D + ++ +NA E + S++ + +L + ++LED+ ++
Sbjct: 389 VLIAESEKDIEKLKATFINAQAELVISNLAQENHFETHLLATINNKFANTLEDINHFLRK 448
Query: 380 TLF 382
TLF
Sbjct: 449 TLF 451
>gi|307107102|gb|EFN55346.1| hypothetical protein CHLNCDRAFT_134358 [Chlorella variabilis]
Length = 2164
Score = 169 bits (427), Expect = 6e-39, Method: Composition-based stats.
Identities = 122/374 (32%), Positives = 201/374 (53%), Gaps = 38/374 (10%)
Query: 23 YAGVKGQYPPTKRQL---NKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNE 79
+A VKG Y + Q +++ +CTIEK + I L QE R+ E+ +V+DE HM+++
Sbjct: 351 HAAVKGFYGGEEGQALGPRGETVAVCTIEKANVAINKLAQEGRLGELCCVVVDELHMVSD 410
Query: 80 PQRGPILECVVSKVLYLKKS--IQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYV 137
RG LE +SK+L+ S +QI MSAT+G + +L ++ ++ N RP +E+
Sbjct: 411 GDRGVGLEMSLSKLLFSPHSRHVQIIGMSATMGGLESLRAWLRAELFLTNFRPVPLTEHA 470
Query: 138 TVDKRVFQSFDGKSLTEIYAD-----NLDYSLTGSGPDAVLHLV-----QGNLMVLIFCS 187
+V+Q + ++L E + + S + D ++ LV +G+ VL+FCS
Sbjct: 471 VFRGKVYQK-ELEALEEGHPPLQELREVAPSDSRRDADRLVPLVAEATAEGH-SVLVFCS 528
Query: 188 SKIACSNLA-----LRLQFDRFPGTKEYK-KQEKEDLIEALKEENDGKLSTNLEECILYG 241
S+ C + A L Q P ++ + +++ ++ +K G + LE+C+L G
Sbjct: 529 SRRQCESAAALIADLLPQVAPPPAERQAELGEQRAGIVADIKIAMGGAMGAELEKCMLRG 588
Query: 242 VAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRD---SYVGRDFI 298
+A+HHA LT+ ER +E AY + +I TSTLAAGVNLPA+RVI+R + +G +
Sbjct: 589 IAWHHAGLTSEERAGVERAYRCSAVSVITATSTLAAGVNLPARRVILRSLHQASLGIGPV 648
Query: 299 SLNMYKQMVGRAGRTGLQESGESIMLCK---TMQDFLRFSSMMNAGPEPISSHMDPPTLV 355
S + Y QMVGRAGR G GES ++ K Q++ + +++ A P+ P+L
Sbjct: 649 SRSQYLQMVGRAGRAGHSAVGESFLIGKGAANSQEWHQVCALLTA---PV------PSLQ 699
Query: 356 DLILEVVAANLCSS 369
+L AA+ +S
Sbjct: 700 SRVLSAEAASTITS 713
>gi|448712750|ref|ZP_21701779.1| ski2-like helicase [Halobiforma nitratireducens JCM 10879]
gi|445790176|gb|EMA40845.1| ski2-like helicase [Halobiforma nitratireducens JCM 10879]
Length = 793
Score = 169 bits (427), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 171/648 (26%), Positives = 297/648 (45%), Gaps = 62/648 (9%)
Query: 14 EEFKFYLEEYA---GVK-GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE--NRIDEIG 67
EEF+ Y EE+ GV G Y T L K I + T EK + SL++ + + ++
Sbjct: 86 EEFEAY-EEFGVTTGVATGNYESTSDWLATKDIVVATSEK----VDSLVRNGADWLSDLT 140
Query: 68 LIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVEN 127
+V DE H++++ +RGP LE ++K+ L +Q A+SAT+GN + ++ +++ +
Sbjct: 141 CVVSDEVHLIDDRERGPTLEVTLAKLRRLNPGMQQVALSATVGNADEIADWLDAELIDTD 200
Query: 128 SRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCS 187
RP V + +FD S E+ + + V ++Q + L+F +
Sbjct: 201 WRPIDLEMGVHYGNAL--NFDDGSTREVPVEGSEKQEAA----LVRDILQEDGSSLVFVN 254
Query: 188 SKIACSNLALRL-QFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHH 246
S+ A RL Q R T E ++ E DL E ++ ++D + ST+L +C+ G A+HH
Sbjct: 255 SRRNAEAAARRLGQVSREELTAE-ERAELADLAEDIRNDSDSETSTDLADCVERGSAFHH 313
Query: 247 ADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRD------SYVGRDFISL 300
A L++ +R L+E+A+ L++I T TLAAGVN PA+RVI+RD S G + +
Sbjct: 314 AGLSSTQRSLVEDAFRDRLLKVISATPTLAAGVNTPARRVIVRDWRRFDPSAGGMAPLDV 373
Query: 301 NMYKQMVGRAGRTGLQESGESIMLCKTMQDFLR-FSSMMNAGPEPISSHMDP-PTLVDLI 358
QM+GRAGR GL GE+++L K+ + F + A PEP+ S + P L +
Sbjct: 374 LEVHQMMGRAGRPGLDPYGEAVLLAKSHDESEELFDRYVWADPEPVRSKLAAEPALRTHV 433
Query: 359 LEVVAANLCSSLEDVKTLIKHTLFYQLKSPEDQQTFLETTLSEIVASLL------ASKGT 412
L +A+ + E + ++ TL+ S + L +++A L S GT
Sbjct: 434 LATIASGFARTREGLLEFLEATLYASQSS---ESGRLTAVTDDVLAYLERNDFIDRSGGT 490
Query: 413 MLTMNEAGHLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEY 472
++A S TS A A Q D + + L + ++ L+ + +V LE
Sbjct: 491 TGDTDDADAGSFTSAADLAAQ--RDEDEADELEATSLGHTVSRLYLDPMSAAEIVHGLES 548
Query: 473 ---RIPSDGI--LLSRS-KVYDRYTKFHPQTL-------RVAEALGVTENLVALNVTGKL 519
R + G+ L+SR+ +Y+ Y + R AE LG + +
Sbjct: 549 ADERPTALGLYQLVSRTPDMYELYLRSGEDEQFGELYYKREAELLG--------DAPSEF 600
Query: 520 KDEK-KALLCRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCE 578
++E+ + L +L D D+ +++ + Y I L+ ++ + +
Sbjct: 601 EEERFEDWLAALKTGKLLEDWAQEDDEERITERYEIGPGDLRGKVDTAEWLLGAAESLAQ 660
Query: 579 ELPELWCYKQLLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAG 626
E+ W + + + + L L+ + GV RAR+L G
Sbjct: 661 EIDSEWTVA--VREARARVEHGVGEELLELVSVGGVGRKRARRLYERG 706
>gi|294495240|ref|YP_003541733.1| DEAD/DEAH box helicase [Methanohalophilus mahii DSM 5219]
gi|292666239|gb|ADE36088.1| DEAD/DEAH box helicase domain protein [Methanohalophilus mahii DSM
5219]
Length = 729
Score = 169 bits (427), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 174/655 (26%), Positives = 293/655 (44%), Gaps = 66/655 (10%)
Query: 10 AKAAEEFK-FYLEEYAGVK-----GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRI 63
A A+E+F+ F E G+K G + L I + T EK L+ + +
Sbjct: 78 ALASEKFRDFKRFESLGIKTAISTGDFDSRDEWLGSNDIIVATSEKTDSLLRN--STPWM 135
Query: 64 DEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGIT 123
+I +++DE H+L+ RGP LE ++K+ L Q+ A+SAT+GN ++ ++E
Sbjct: 136 KDITAVIVDEVHLLDSANRGPTLEVTLAKLKRLNPGAQVVALSATVGNAMEIAQWLEAKL 195
Query: 124 YVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVL 183
+ RPT E + + +FD + T I + + S+ + V+ V L
Sbjct: 196 VLSEWRPTYLHEGIFYGDAI--NFD-EDQTFIERRHKEDSV-----NLVIDTVIQGGQCL 247
Query: 184 IFCSSKIACSNLALRLQFDRFPGTKEY-KKQEKEDLIEALKE--EN-DGKLSTNLEECIL 239
+F SS+ C A + P E +Q + +L E KE EN + KL+ L CI
Sbjct: 248 VFDSSRRNCVGFAKKCA----PAVGELLDRQNRNELEEVAKEVLENGETKLTETLAYCIK 303
Query: 240 YGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIR-----DSYVG 294
GVA+HHA L + RR++E+A+ +++IC T TLAAG+NLPA+RVIIR D G
Sbjct: 304 KGVAFHHAGLNSAHRRIVEDAFRNNLIKMICSTPTLAAGLNLPARRVIIRSYKRYDPNAG 363
Query: 295 RDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLR-FSSMMNAGPEPISSHMDPP- 352
I + YKQM GRAGR L GE++++ KT ++F ++A E I S +
Sbjct: 364 MQPIPVLDYKQMAGRAGRPHLDPYGEAVVIVKTYEEFTDVLERYISASAEDIWSKLGTEN 423
Query: 353 TLVDLILEVVAANLCSSLEDVKTLIKHTLFYQLKSPEDQQTFLETTLSEIVASLLASKGT 412
L IL +A+ + ++ T + T F QQ++ L E L ++G
Sbjct: 424 ALRTHILSTIASGFANCHREILTFLGSTFFAH-----QQQSWNFEELLEDCLIFLKNEGM 478
Query: 413 MLTMNEAGHLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHML-FLVIPLE 471
+ NE + T + K + + L +K+ L + H+ ++ L
Sbjct: 479 LEQDNET--IRATELGKM---------ISSLYIDPLSASKIIRGLEKTTHVTDMTLLQLI 527
Query: 472 YRIPSDGILLSRSKVYDRYTKFHPQTLRVAEALGVTENLVALNVTGKLKDEKKALLCRFF 531
P +L R++ Y+ + + TE + + K + E + L
Sbjct: 528 CSTPDMRLLYLRNRDYEIINDY---------VMNHTEEFIEVPSPFK-QIEYEWFLSEVK 577
Query: 532 HACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEEL-PEL--WCYKQ 588
A +L + +N + +K+ + Y + + ++ + R + P+L C K
Sbjct: 578 TALLLLEWINEKSLEKIVENYQVGEGDIYASSDIAEWLMHATQRIASRINPQLETECAK- 636
Query: 589 LLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIARADAKEMVA 643
L + + Y L L+++P V RAR+L GY S + +A AD K++
Sbjct: 637 ----LEKRIHYGAGSELIELVEIPNVGRARARKLFKKGYRSRQKLATADEKQLAG 687
>gi|358377966|gb|EHK15649.1| hypothetical protein TRIVIDRAFT_185105 [Trichoderma virens Gv29-8]
Length = 1015
Score = 168 bits (426), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 173/636 (27%), Positives = 282/636 (44%), Gaps = 73/636 (11%)
Query: 42 IYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQ 101
I ICT+EK + LI + I+++ I ++ +V+DE HM+++ RG +LE + +K+L L++ IQ
Sbjct: 246 IGICTLEKANMLINTAIEDSSISQLRAVVLDELHMIDDDHRGYLLELIATKLLSLEQPIQ 305
Query: 102 IFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSFDGKSLT-------E 154
I MSAT+ N N ++ ++ +Y RP E++ + +V+ + T E
Sbjct: 306 IIGMSATLPNANLVAKWLNAHSYETRYRPIPIEEHLVCEGKVYHIGSNGATTQKQLKVDE 365
Query: 155 IYADNLD------YSLTGSGPDAVLHLV-----QGNLM---VLIFCSSKIACSNLALRLQ 200
I +D S D VL+ V + LM L+F S+ C + A RL
Sbjct: 366 ISKGQVDPIRQIEMSSHKEFRDPVLNAVVSLAHETALMGYGALVFAGSRGICESDA-RLI 424
Query: 201 FDRFPGTKEYKKQ---EKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLI 257
P E + ++ DL+ L+ + G LEE +L GVA+H + R LI
Sbjct: 425 SRVMPQPHELDSRTMDKRMDLLSELRSLSTGA-DPVLEETVLSGVAFHRKS-SLFHRDLI 482
Query: 258 EEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGRDFISLNMYKQMVGRAGRTGLQE 317
EA PA+RVI+ ++ +GRDF+ +M +QM GRAGR G
Sbjct: 483 AEA---------------------PARRVILHNARMGRDFVGPSMLRQMRGRAGRQGKSP 521
Query: 318 SGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPT--LVDLILEVVAANLCSSLEDVKT 375
GE+ + C+ D + +M A I+S ++ + ILEV++ L +S E +
Sbjct: 522 IGETYLCCR-QDDLEQVLDLMYADIPEIASCLNTENKRVQRAILEVISVRLANSQESLLE 580
Query: 376 LIKHTLFYQLKSPEDQQTFLETTLSEIVASLLASKGTMLTMNEA-GHLSLTSIAKAAVQA 434
++L E + L + L EI L +N++ + T + KA V +
Sbjct: 581 YFSNSLISYTHDREFVENCLTSGLEEI-------HDLGLIVNDSYSSFAATQLGKAIVAS 633
Query: 435 GLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEYRIPSDGILLSRSKVYDRYTKFH 494
+ + I+S+L F + +H+L++ P++ GI+++ +
Sbjct: 634 SVDPYDGVFIHSELTKTLKAFVMDGEMHILYVFTPVQ----DFGIVVNWQVFRNEMDALD 689
Query: 495 PQTLRVAEALGVTENLVALNVTG-KLKD---EKKAL---LCRFFHACILYDVLNFDNHQK 547
LRV LG+ V G LK+ E+K L RF+ A L D+ N
Sbjct: 690 ESGLRVLGFLGIKPTAVLKFAQGVPLKESTPEEKELARVYRRFYLAMQLRDLCNEMPIHV 749
Query: 548 VAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELW-CYKQLLTDLPQTLMYCRAPNLR 606
VA+ Y +Q FA+ + +FCE + W L LM +L
Sbjct: 750 VARKYDSPRGSVQTLAQTCQGFAAGMIKFCEHMG--WGVMAAALEHFSDRLMAGARTDLL 807
Query: 607 ALMDLPGVKIGRARQLLNAGYSSLELIARADAKEMV 642
L +P +K AR GY ++ IA AD KE+V
Sbjct: 808 ELAKIPFIKSRTARVFWENGYRTVGAIANADPKELV 843
>gi|340623794|ref|YP_004742247.1| DEAD/DEAH box helicase [Methanococcus maripaludis X1]
gi|339904062|gb|AEK19504.1| DEAD/DEAH box helicase domain-containing protein [Methanococcus
maripaludis X1]
Length = 707
Score = 168 bits (425), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 170/638 (26%), Positives = 291/638 (45%), Gaps = 70/638 (10%)
Query: 14 EEFKFYLEEYA---GVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIV 70
EEFK E+Y G+ +K LNK + I T EK LI I + ++++ +V
Sbjct: 83 EEFKEKYEKYGLKIGISIGDFDSKEDLNKYDLIITTSEKLDSLIRHKI--DWLEDVSCVV 140
Query: 71 IDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVENSRP 130
IDE H++ + RG LE V++ + L ++QI +SAT+GN L+ ++ ++ RP
Sbjct: 141 IDEIHLIGDGDRGATLEVVLTILKSL--NLQIIGLSATVGNPGELADWLNAKLIIDTWRP 198
Query: 131 TKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGP--DAVLHLVQGNLMVLIFCSS 188
+ + +F ++ ++ D + P + V+ V + LIFCSS
Sbjct: 199 IELKK---------ATFFENTINYTNSEEKDVKVVKKNPLENLVIDTVNEDGSCLIFCSS 249
Query: 189 KIACSNLALRLQFDRFPGTKEYKK-QEKEDLIEALKEENDGKLSTNLEECILYGVAYHHA 247
K A + F E +K E + +E +++GK L +C+ GVA+HHA
Sbjct: 250 KRNAVGEAKKHDLREFLHPLEVEKLNEVSEELE--NSDSEGKTVKVLADCVRKGVAFHHA 307
Query: 248 DLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRD----SYVGRDFISLNMY 303
LT +R+++E+AY +++ICCT TL+AG+N+P +R IIRD S G FI +
Sbjct: 308 GLTTVQRKIVEKAYRNRIIKVICCTPTLSAGLNMPCRRAIIRDVKRFSDKGMKFIPVMEI 367
Query: 304 KQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHM-DPPTLVDLILEVV 362
Q +GRAGR GL GE I++ K D S++N PE I S + + +L +L ++
Sbjct: 368 HQCIGRAGRPGLDPYGEGIVVLKKKADVTDALSLLNGDPEHIYSGIANYKSLEKHVLGLI 427
Query: 363 AANLCSSLEDVKTLIKHTLF-YQLKSPEDQQTF-LETTLSEIVASLLASKGTMLTMNEAG 420
A+++ + ++ +K+T + YQ + F ++ T+ EI + AG
Sbjct: 428 ASDIVRTKTELFKFLKNTFYAYQY-----EDFFKIKQTVDEI----------LFDFRNAG 472
Query: 421 HLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEYRIPSDGIL 480
+ L + GL I S H +LN L LE D IL
Sbjct: 473 FIRLENEILEVTALGLRVSELYISPSSARH------ILNGLS------NLEDYSFEDHIL 520
Query: 481 LSRSKVYDRYTKFHPQTLRVAEALGVTENLVALNVTGKLKDEKKALLCRFFHACILYDVL 540
L+ S Y+ K LR+ + N L G DE L+ +F++ + +
Sbjct: 521 LTLSGTYEMKPK-----LRMPDNDSDIRN--ELESLGYESDED--LIEDYFYSGLFKAWI 571
Query: 541 NFDNHQKVAKMYGIQNSHLQ---NFLNVTSYFASKVYRFCEELPELWCYKQLLTDLPQTL 597
N +++ + + ++ L+ +N Y A ++ R L + W +++ L
Sbjct: 572 NESTDEEIHENFAVEPGILRYKLEQMNWMIYSAKELLRISGNLKDYW---NEFSNIEVRL 628
Query: 598 MYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIAR 635
Y + L L+ + G+ +AR+L + G + E I +
Sbjct: 629 KYGASEELVELLKIKGIGRVKARKLYDVGLKTREDIKK 666
>gi|170592397|ref|XP_001900955.1| Helicase conserved C-terminal domain containing protein [Brugia
malayi]
gi|158591650|gb|EDP30255.1| Helicase conserved C-terminal domain containing protein [Brugia
malayi]
Length = 637
Score = 168 bits (425), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 107/314 (34%), Positives = 172/314 (54%), Gaps = 30/314 (9%)
Query: 44 ICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKK-SIQI 102
+CTIEK + L+ +I + I +IG++VIDEFH+L + RGP++E ++ K LY+ + IQI
Sbjct: 120 VCTIEKANSLLNRMIADKSIFDIGVLVIDEFHILFDGNRGPLVEQIIGKALYISRHQIQI 179
Query: 103 FAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDY 162
++SAT+ N++ L+ ++ Y RP + E + D + D +L I + ++
Sbjct: 180 ISLSATLPNLDELADWLNAEKYETQFRPVQLHEMIMCDNELR---DVNTLQHIRTVSNEF 236
Query: 163 SLTGSGPDAVLHLVQGNLM----VLIFCSSKIACSNLALRL--QFDRFPGTKEYKKQEKE 216
++ ++HL ++M VL+FCSSK LAL + F+++ +K E
Sbjct: 237 VVSNDIEYGIIHLCTESVMKGESVLVFCSSKAETEKLALAISQHFEKY-----FKSSNSE 291
Query: 217 DLI-----EALKEENDGK------LSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGT 265
+LI ++LK + L E + +G+A+HHA LT ER IE A+ +
Sbjct: 292 NLISPFNIQSLKTVKHAFHHEIQFVDDILRETLPHGIAFHHAGLTVEERESIENAFCDQS 351
Query: 266 LQIICCTSTLAAGVNLPAQRVIIRDSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLC 325
L+I+C TSTL++G+NLPA RVII+ G ++ Y QM+GRAGR G E G LC
Sbjct: 352 LRIVCATSTLSSGINLPAHRVIIKTQLCGPVALNGLTYMQMIGRAGRLGQTEKG----LC 407
Query: 326 KTMQDFLRFSSMMN 339
T F+S ++
Sbjct: 408 GTQLGQAVFTSSLS 421
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 113/246 (45%), Gaps = 13/246 (5%)
Query: 407 LASKGTMLTMNEAGHLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFL 466
+ + L E G L T + +A + LS D+ L +Y DL + L N LH+L+L
Sbjct: 392 MIGRAGRLGQTEKG-LCGTQLGQAVFTSSLSPDIALQVYDDLEKATRSLALDNELHLLYL 450
Query: 467 VIPLEYRIPSDGILLS---RSKVYDRYTKFHPQTLRVAEALGVTENLVALNVTGKL--KD 521
V PL SD I ++ + Y+ ++K + RV + +G+ ++ + + G+ K
Sbjct: 451 VTPLH----SDSIWMNYIDWNVYYNIWSKLPTKLQRVGKMIGILDSFILGKIQGRQASKI 506
Query: 522 EKKALLCRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELP 581
+ RF A LYD++ + VA+ + I LQ ++ +A V FCE+L
Sbjct: 507 SNMQVHLRFLSALALYDLIREYSLGDVARRFRINRGALQTLQQQSATYAYMVVSFCEKLG 566
Query: 582 ELWCY-KQLLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIARADAKE 640
W Y + +L + L + +L L+ + G+ RAR NA +++ +A +
Sbjct: 567 --WTYLRSVLDGFSERLTFGVRKDLTELVQIEGIDGIRARAFHNANITTIPTLAITSIDD 624
Query: 641 MVAKIR 646
+ +R
Sbjct: 625 IAKILR 630
>gi|302915813|ref|XP_003051717.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256732656|gb|EEU46004.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 890
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 154/627 (24%), Positives = 270/627 (43%), Gaps = 75/627 (11%)
Query: 53 LIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNI 112
L+ + I + I ++ +V+DE HM+++ RG +LE V SK+L L++ IQI MSAT+ N+
Sbjct: 251 LVNTAIDDCSITKLRAVVLDELHMVDDEHRGYLLELVASKLLSLEQPIQIIGMSATLPNM 310
Query: 113 NALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYAD-------------- 158
+ ++ +++G Y RP E++ D V+ + SL A
Sbjct: 311 DLMAQWLDGHCYETRYRPVPIEEHLVYDGNVYPAGSTSSLIRTAAQLNNRPTQTPSLTKP 370
Query: 159 --NLDYSLTGSGPDAVLHLV--------QGNLMVLIFCSSKIACSNLALRLQFDRFPGTK 208
++ S D VL+ V L+F S+ C + A R P
Sbjct: 371 IRRIEPSTHKELRDPVLNAVVTLACETATSGFGALVFAGSRGMCESDA-RWISRAMPPPN 429
Query: 209 EYKKQ---EKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGT 265
E + + + DL+ L+ N G + LEE +LYGVA+H ++ ++
Sbjct: 430 ELRPEVVDRRMDLLGELRSLNTG-IDPVLEETVLYGVAFHRKGISLQRDMMM-------- 480
Query: 266 LQIICCTSTLAAGVNLPAQRVIIRDSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLC 325
+PA+RVI+ + +GR+F+ +M +QM GRAGR G GE+ + C
Sbjct: 481 ---------------VPARRVILHNCRMGREFVGPSMLRQMRGRAGRQGKAPIGETYLCC 525
Query: 326 KTMQDFLRFSSMMNAGPEPISSHMDPPT--LVDLILEVVAANLCSSLEDVKTLIKHTLFY 383
+ D + +MNA P++S ++ + +LEVV+ L +S E + +L
Sbjct: 526 RE-NDLEQVVELMNAELPPVTSCLNTENRRIQRALLEVVSIRLATSHESIHDYFSKSLLS 584
Query: 384 QLKSPEDQQTFLETTLSEIVASLLASKGTMLTMNEAGHLSLTSIAKAAVQAGLSHDVCLI 443
S + + ++L EI K + + L+ T + KA V + + D +
Sbjct: 585 HTHSAKFVNECITSSLEEI------EKLGFVERDSFSMLTATQLGKAIVASAIDPDDGIF 638
Query: 444 IYSDLLHNKLNFCLLNSLHMLFLVIPLEYRIPSDGILLSRSKVYDRYTKFHPQTLRVAEA 503
++ +L F + +H+L+ P++ GI ++ + +RV
Sbjct: 639 VHKELSRALQAFVMDGEMHVLYTFTPVQ----EFGITVNWQVFRNEMEGLDESGMRVLRL 694
Query: 504 LGVTENLVALNVTG----KLKDEKKALL---CRFFHACILYDVLNFDNHQKVAKMYGIQN 556
LG+ + G ++ E+K L RF+ A L D+ N VA+ Y +
Sbjct: 695 LGIKPTTILRLAQGATLREVTPEEKQLARIHRRFYLALQLRDLCNEVPIHMVARKYDVPR 754
Query: 557 SHLQNFLNVTSYFASKVYRFCEELPELW-CYKQLLTDLPQTLMYCRAPNLRALMDLPGVK 615
+QN FA+ + +FCE++ W L L+ +L AL +P +K
Sbjct: 755 GTVQNLSQTCQGFAAGMIKFCEQMG--WGVMAAALDHFSDRLIAGARADLLALAKIPFIK 812
Query: 616 IGRARQLLNAGYSSLELIARADAKEMV 642
AR G+ ++ IA AD E++
Sbjct: 813 SRTARVFWENGFRTVATIANADPAELL 839
>gi|145353969|ref|XP_001421269.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581506|gb|ABO99562.1| predicted protein, partial [Ostreococcus lucimarinus CCE9901]
Length = 402
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 118/345 (34%), Positives = 176/345 (51%), Gaps = 33/345 (9%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V EK SL + YAGV+ + P +++ + TIEK S + L +
Sbjct: 65 LVREKVASLESLLRPLGIKVRGYAGVECEGAPLGS--SRERCAVTTIEKASSCVNRLFET 122
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKS-------IQIFAMSATIG--N 111
I + ++V+DE HM++E +RG LE +++K+ + KS QI MSAT+G +
Sbjct: 123 GEISLLSVVVVDELHMVSEDERGCALEGMLAKIRHGVKSGKVSSDGPQIVCMSATVGKSS 182
Query: 112 INALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSFD----GKSLTEIYADNLDYSLTGS 167
+ L+ +++ YV + RP + EYV V+ + G LT + L
Sbjct: 183 MERLARWLDAEIYVSHHRPVELKEYVVCVGGVYAKENRGEAGWELTRVADSPSRVEL--- 239
Query: 168 GPDAVLHLVQGNLMV-----LIFCSSKIACSNLALRLQ--FDRFPGTKEYKKQEKEDLIE 220
+ V LV G + V L+FCSSK CS A +L P T + E+ +
Sbjct: 240 --EIVAELV-GQVFVNAHSSLVFCSSKSQCSVYATKLASLLPVNPNTAHLR----EECVA 292
Query: 221 ALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVN 280
L E +G+ L C+ G+A+HHA LT E+R+IEE + AG + + CT+TLAAGVN
Sbjct: 293 RLYEAAEGEPDQALVACVRSGLAWHHAGLTTAEKRVIEEGFRAGAILALTCTTTLAAGVN 352
Query: 281 LPAQR-VIIRDSYVGRDFISLNMYKQMVGRAGRTGLQESGESIML 324
LPA+R VI+R G S+ YKQM GRAGR G + GES ++
Sbjct: 353 LPARRCVILRGFIAGLPTPSMAQYKQMAGRAGRKGQSDFGESFLV 397
>gi|154297658|ref|XP_001549255.1| hypothetical protein BC1G_12674 [Botryotinia fuckeliana B05.10]
Length = 762
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 125/437 (28%), Positives = 214/437 (48%), Gaps = 22/437 (5%)
Query: 215 KEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTST 274
+ DL+ L++ + G L LE+ +L GVA+HHA LT ER L+ AY G L+++ T +
Sbjct: 287 RRDLLNDLRDTSSG-LDQVLEKTVLMGVAFHHAGLTTEERDLVAAAYDEGVLKVMVATCS 345
Query: 275 LAAGVNLPAQRVIIRDSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRF 334
LAAG+NLPA+RVI+ + +G D + +M +QM GRAGR G E GE+ + C+ D
Sbjct: 346 LAAGINLPARRVILHGARMGSDLVGPSMLRQMRGRAGRKGKDEIGETYLCCQK-SDLEAV 404
Query: 335 SSMMNAGPEPISSHMDPPT--LVDLILEVVAANLCSSLEDVKTLIKHTLFYQLKSPEDQQ 392
+ +M A + S + P + +LEV+A L +S E + +K TL E+ +
Sbjct: 405 AELMEAEIPSVESCLVPGKRGIKRALLEVIATKLATSSESIDDYVKKTLLCHTIDQEELK 464
Query: 393 TFLETTLSEIVASLLASKGTMLTMNEAGHLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNK 452
+ +E TL +++ S L + E+ T + +A V + L+ + L ++ +L +
Sbjct: 465 SMVEITLKDLLESELVEQ------TESYSYEATRLGQAVVASSLAPEDGLFVHKELRRSL 518
Query: 453 LNFCLLNSLHMLFLVIPLEYRIPSDGILLSRSKVYDRYTKFHPQTLRVAEALGVTENLV- 511
F L +H+L+ P++ S + R +V LRV +G+ +L+
Sbjct: 519 EAFVLDCEMHVLYTFTPVQAMQGSINWQIFRREV----DMLDESNLRVLGFVGLKPSLIN 574
Query: 512 ALNVTGKLKD------EKKALLCRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNV 565
+ G +++ E + RF+ A L D+ N VA+ Y + +QN
Sbjct: 575 KMAQGGSMRESTPDEIEITRIYKRFYTALQLRDLCNEMPVHAVARKYDLPRGTIQNLAQT 634
Query: 566 TSYFASKVYRFCEELPELWCYKQLLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNA 625
FA+ + +FCE++ + +L L +L AL ++ +K AR +
Sbjct: 635 CHGFAAGMIKFCEKM-DWGALAAVLDHFSDRLKAGAKSDLLALAEITFIKSRTARIFWDN 693
Query: 626 GYSSLELIARADAKEMV 642
GY ++ IA AD KE++
Sbjct: 694 GYKTVGAIAGADLKELI 710
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 47/68 (69%)
Query: 42 IYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQ 101
I +CTIEK + L+ + I E I +G++++DE H +N+ RG ILE + +K+L L++ +Q
Sbjct: 203 IAVCTIEKANSLVNAAIDECSIGNLGVVIMDEIHFINDESRGYILELMATKLLSLEQGVQ 262
Query: 102 IFAMSATI 109
I MSAT+
Sbjct: 263 IVGMSATL 270
>gi|308808137|ref|XP_003081379.1| helicase and polymerase containing protein TEBICHI (ISS)
[Ostreococcus tauri]
gi|116059841|emb|CAL55548.1| helicase and polymerase containing protein TEBICHI (ISS)
[Ostreococcus tauri]
Length = 1489
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 161/677 (23%), Positives = 285/677 (42%), Gaps = 113/677 (16%)
Query: 23 YAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQR 82
Y G G P + ++ + T E+ +++ L+++NR+ E+ ++++DE H++ + R
Sbjct: 118 YGGRGGTIPSDS---SASTLLVLTPERANQVTSRLLEDNRLRELSVVIVDELHLIQDNDR 174
Query: 83 GPILECVVSKVLYL-------------------------------------KKSIQIFAM 105
G +E ++K+++ +++ QI M
Sbjct: 175 GATMELFLTKLVFSSGLWRRKLSEENDARGSADGESQTTYSVGRTRGGVRDQRTTQILGM 234
Query: 106 SATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLT 165
SA+I N+ +L+ ++ +V + RP + + + D + E+ + +D
Sbjct: 235 SASIPNLTSLAEWLSARLFVTDFRPVRLERVIRTMTNKSPNSDVAHIAELAQETVDE--- 291
Query: 166 GSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEE 225
QG+ VL+FCSS+ AC LA LQ +
Sbjct: 292 -----------QGS--VLVFCSSRRACKILADDLQ----------SMMRCDPSCNGANVT 328
Query: 226 NDGKLSTNL-------EECILY---GVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTL 275
+ G+L T+ E + Y G+AYHHA L+ E + AY G ++++CCTSTL
Sbjct: 329 SSGELLTSFVAFLGEKSEVLGYIKSGIAYHHAGLSREENEAVAGAYKRGLIRVLCCTSTL 388
Query: 276 AAGVNLPAQRVIIRDSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFS 335
A GVNLPA+RVI+RD+ +G ++ +QM GRAGR GL SG +I+ C+ D +
Sbjct: 389 ATGVNLPARRVILRDTNMGWKKLTARDVQQMCGRAGRAGLDASGSAIVFCQKRADLEKR- 447
Query: 336 SMMNAGPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQLKSPEDQQTFL 395
++S + + ++LE VA+ L + EDV +K TL L D +
Sbjct: 448 ---------LTSAVAEIGMRRIMLEAVASGLVKTPEDVLAYVKCTLLSALNDFNDAVKQI 498
Query: 396 ETTLSEIVASLLASKGTMLTMNEAGHLSLTSIAKAAVQAGLSH-DVCLIIYSDLLHNKLN 454
I A + +L + +L +S AV G+ D I D+ + +
Sbjct: 499 -----AIDALQWCQRNALLVWSTTTYLWNSSPLGTAVAGGMMPLDQIQPIVRDIRIARED 553
Query: 455 FCLLNSLHMLFLVIPLEYRIPSDGILLSRSKVY--DR----YTKFHPQTLRVAEALGVTE 508
L LH+LFL+ + SDG L+ + + DR ++ + R+A + + E
Sbjct: 554 LVLSTPLHLLFLLTSPPV-LDSDGAPLNVRETWPLDRFAAVWSNLSSEQERIARKVEIDE 612
Query: 509 NLVALNVTGKLKDEKKALLCRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSY 568
+ L RF A L D++ VA+ YG++ + +
Sbjct: 613 GYI-------------QRLRRFHLALALTDLIQEVPIDVVAQKYGLRTFDIAEEQKACAR 659
Query: 569 FASKVYRFCEELPELWCYKQLLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYS 628
FAS V C L + + L+ + + + L +P + I RAR L G +
Sbjct: 660 FASYVATICGTL-GMGDMEFLINKISDRITAGAQEEILELTKIPHIGIHRARALYAGGIT 718
Query: 629 SLELIARADAKEMVAKI 645
+ + I + + +A +
Sbjct: 719 NPKSIVTLGSVDKIAAV 735
>gi|336477283|ref|YP_004616424.1| DEAD/DEAH box helicase [Methanosalsum zhilinae DSM 4017]
gi|335930664|gb|AEH61205.1| DEAD/DEAH box helicase domain protein [Methanosalsum zhilinae DSM
4017]
Length = 739
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 164/647 (25%), Positives = 281/647 (43%), Gaps = 55/647 (8%)
Query: 10 AKAAEEFKFYLE-EYAGVK-----GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRI 63
A A+E++ + E E G+K G + L K I I T EK L+ + + + +
Sbjct: 78 ALASEKYSRFREFESLGIKVGIATGDLDSREEWLGKNDIIIATSEKVDSLLRN--ESSWM 135
Query: 64 DEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGIT 123
EI +V DE H+LN RGP LE ++K+++L QI A+SATIGN ++ ++
Sbjct: 136 KEINTVVADEVHLLNSVNRGPTLEITLAKLIHLNPGSQIIALSATIGNPEDIAGWLGARL 195
Query: 124 YVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVL 183
V RPT E + +D + K + + D+ + V+ V+ L
Sbjct: 196 VVSEWRPTDLYEGILLDGLLHIGNIKKDIQDESRDD--------AVNLVIDTVKDKGQCL 247
Query: 184 IFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVA 243
+F SS+ C A + E+ + + L + + E + +++ L C+ GVA
Sbjct: 248 VFESSRRNCMGFAKKAGKWVSKILDEHDTIQLKSLSQEIGEAGETEIADVLSRCVRQGVA 307
Query: 244 YHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIR-----DSYVGRDFI 298
+HHA L + RR++EE + +++I T TLAAG+NLPA+RVIIR D G I
Sbjct: 308 FHHAGLNSEHRRMVEEGFRKNLIKMISSTPTLAAGLNLPARRVIIRSYKRYDPNFGMKPI 367
Query: 299 SLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLR-FSSMMNAGPEPISSHMDPP-TLVD 356
+ YKQM GRAGR L GES+++ ++ +F+ + +NA PE I S + L
Sbjct: 368 PVLEYKQMAGRAGRPHLDPYGESVLIARSYDEFMDIMENYVNADPEDIWSKLGTENALRT 427
Query: 357 LILEVVAANLCSSLEDVKTLIKHTLFYQLKSPEDQQTFLETTLSEIVASLLASKGTMLTM 416
+L + + + +K T F K D L + E V L+ ++ +
Sbjct: 428 HVLSTIVNGFAYTYRGLMDFVKMTFFAYQKEASD----LHDVIEECVRFLIDNEMIISDS 483
Query: 417 NEAGHLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKL------NFCLLNSLHMLFLVIPL 470
N+ + ++A ++ + + ++Y D L L + M+ L+
Sbjct: 484 NDI-------LPESAFRSTATGKLISMLYIDPLSGSLIMDGIRKADYFEDITMMHLIC-- 534
Query: 471 EYRIPSDGILLSRSKVYDRYTKFHPQTLRVAEALGVTENLVALNVTGKLKDEKKALLCRF 530
P L RS Y+ + Q + +++ K+ E + L
Sbjct: 535 --STPDMKNLYMRSSDYENVNMYVLQN---------KDKFISMPSPFKMI-EYEWFLGEV 582
Query: 531 FHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELWCYKQLL 590
A +L D +N + K YGI ++ F + R L ++ +
Sbjct: 583 KTALLLLDWINEVPADDICKKYGIGEGDIRMFSETAVWLMHATSRLS-GLLKVSEASEKS 641
Query: 591 TDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIARAD 637
+L + L Y L ++ L G+ RAR++ GY S++ + +AD
Sbjct: 642 KELEKRLSYGINSELVNIVALKGIGRVRARKIYENGYRSIDDLKKAD 688
>gi|134045972|ref|YP_001097458.1| DEAD/DEAH box helicase domain-containing protein [Methanococcus
maripaludis C5]
gi|132663597|gb|ABO35243.1| DEAD/DEAH box helicase domain protein [Methanococcus maripaludis
C5]
Length = 707
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 174/643 (27%), Positives = 297/643 (46%), Gaps = 80/643 (12%)
Query: 14 EEFKFYLEEYA---GVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIV 70
EEFK E+Y G+ +K L+ ++ I T EK LI I + ++++ +V
Sbjct: 83 EEFKEKYEKYGLKIGISIGDFDSKEDLSSNNLIITTSEKLDSLIRHKI--DWLEDVSCVV 140
Query: 71 IDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVENSRP 130
IDE H++ + RG LE V++ + L+ +QI +SAT+GN L+ ++ +++ RP
Sbjct: 141 IDEIHLIGDGDRGATLEVVLTILKSLE--LQIIGLSATVGNPGELADWLNAKLVIDSWRP 198
Query: 131 TKHSEYVTVDKRVFQSFDGKSLTEIYADNL--DYSLTGSGP--DAVLHLVQGNLMVLIFC 186
+ + K F F+ T Y D D P + V+ V + LIFC
Sbjct: 199 ------IELRKATF--FEN---TIEYTDKKEKDVKRHKKNPLENLVIDTVNEDGSCLIFC 247
Query: 187 SSKIACSNLALRLQFDRFPGTKEY-KKQEKEDLIEALKE----ENDGKLSTNLEECILYG 241
SSK A + +EY E E LIE +E +++GK L +C+ G
Sbjct: 248 SSKRNAVGEAKKHDL------REYLHPLEVEKLIEVSEELLSSDSEGKTVKTLADCVKKG 301
Query: 242 VAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRD----SYVGRDF 297
+A+HHA LT +R+++E AY +++ICCT TL+AG+N+P +R IIRD S G
Sbjct: 302 IAFHHAGLTTQQRKIVESAYRNRIIKVICCTPTLSAGLNMPCRRAIIRDVKRFSDNGMKL 361
Query: 298 ISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHM-DPPTLVD 356
I + Q +GRAGR GL GE I++ K D + +++N PE I S + + +L
Sbjct: 362 IPVMEIHQCIGRAGRPGLDPYGEGIVVLKKKADVMEALNLLNGDPEHIYSGIANYKSLEK 421
Query: 357 LILEVVAANLCSSLEDVKTLIKHTLF-YQLKSPEDQQTFLETTLSEIVASLLASKGTMLT 415
IL ++A+++ + ++ +K+T + YQ D ++ T+ EI L K + L
Sbjct: 422 HILGLIASDITRNKTELYKFLKNTFYAYQY----DDFGKIKRTVEEI---LFDFKNSKLV 474
Query: 416 MNEAGHLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEYRIP 475
E L +T++ L ++L +++H+L + LE
Sbjct: 475 RPENEILEVTALG-------------------LRVSELYISPSSAIHILDGLKGLENYSF 515
Query: 476 SDGILLSRSKVYDRYTKFHPQTLRVAEALGVTENLVALNVTGKLKDEKKALLCRFFHACI 535
D ILL+ S ++ K LR E N L G D L+ FF++ +
Sbjct: 516 EDHILLTLSGTHEMKPK-----LRTPEDNSELRN--ELESLG--YDTVDDLVDDFFYSGL 566
Query: 536 LYDVLNFDNHQKVAKMYGIQNSHLQ---NFLNVTSYFASKVYRFCEELPELWCYKQLLTD 592
+N +++ + + ++ L+ +N Y A ++ R E L + W ++
Sbjct: 567 FKAWINESTDEEIHENFAVEPGILRYKLEQMNWMIYSAKELLRISENLKDYW---NEFSN 623
Query: 593 LPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIAR 635
+ L Y + L L+ + G+ +AR+L + G + E I +
Sbjct: 624 IEVRLKYGASEELVELLKIRGIGRVKARKLYDVGIKTREDIKK 666
>gi|156938074|ref|YP_001435870.1| DEAD/DEAH box helicase [Ignicoccus hospitalis KIN4/I]
gi|156567058|gb|ABU82463.1| DEAD/DEAH box helicase domain protein [Ignicoccus hospitalis
KIN4/I]
Length = 698
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 185/663 (27%), Positives = 295/663 (44%), Gaps = 85/663 (12%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+ EKY SL K ++ K L V + P ++ + + + T E+ + SL++
Sbjct: 80 LAFEKYASLKKIFKDSKVAL----SVGDYHAP---EVGEADVLVATYER----MDSLLRH 128
Query: 61 NR--IDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTF 118
N + E+G +V+DE H + + +RGP LE VV+++ + K QI A+SAT+GN L+++
Sbjct: 129 NSPWLKEVGTVVVDEVHYVGDEERGPTLEVVVTRLKLMGK--QIVALSATVGNPEDLASW 186
Query: 119 IEGITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYS---LTGSGPDAVLHL 175
++ + RP K E V D S ++ D ++ L+ G DA LH
Sbjct: 187 LDAELVTHDWRPVKLEEGV---------MDPSSYEVLFEDRVEEVKEVLSDPGLDAALHY 237
Query: 176 VQGNLMVLIFCSSKIACSNLALR----LQFDRFPGTKEYKKQEKEDLIEALKEENDGKLS 231
++ L F S++ N A + L+ D+ TKE+ E ++ E +G+L
Sbjct: 238 MREG-QALYFASTRKRAENAAKKISKLLKPDKV--TKEW--------AERVRIEVEGELG 286
Query: 232 TNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVII--- 288
L + + G A+HHA LT R L+EEA+ +G ++ + T TLAAGVNLPA+ V+I
Sbjct: 287 EVLAKMVERGAAFHHAGLTNEARLLVEEAFRSGAIKFVAATPTLAAGVNLPARAVVIERY 346
Query: 289 -RDSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLR-FSSMMNAGPEPIS 346
R + G IS++ YKQM GRAGR GL G S+++ + + + PE +
Sbjct: 347 TRYTDEGEAPISVSEYKQMAGRAGRPGLDVKGTSVLVARPKAPPEEVYERYVLGQPEDVR 406
Query: 347 SHMDPP-TLVDLILEVVAANLCSSLEDVKTLIKHTLFYQLKSPEDQQTFLETTLSEIVAS 405
S + L +L ++A+ +S ++ I+ TLF + + + + S
Sbjct: 407 SALTSARALRRSLLGLIASKAVNSEAELVEFIEETLFGVTEGAAN-------AIDDARRS 459
Query: 406 LLASKGTMLTMNEAGHLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLF 465
L KG L T +AK V L V L L K L LH L
Sbjct: 460 LEFLKGAGLVEGVKATPLGTVVAKQYVDP-LGAKVVL---GALKRRKGKTTALGYLH-LV 514
Query: 466 LVIPLEYRIPSDGILLSRSKVYDRYT--KFHPQTLRVAEALGVTENLVALNVTGKLKDEK 523
V P +P G+ S + R +F +R E + + L AL V
Sbjct: 515 AVTP---DMPKRGLRSSEVRELWRVAEERFDELLIRDDEYVSESTALSALKV-------- 563
Query: 524 KALLCRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPEL 583
A L + + + +AK YG L+ L+ T+ + Y + L
Sbjct: 564 ---------ALALESWVKEEPEEVIAKKYGFYPGDLR-VLSDTAAWLVHAYSEIAKFVGL 613
Query: 584 WCYKQLLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLE-LIARAD-AKEM 641
+ + + L +L L Y + L L+ +P + RAR L NAG S E + RAD A +
Sbjct: 614 YKHSEALAELELRLKYGVSEELVELVQIPYIGRVRARALWNAGIRSKEDFVKRADLAARV 673
Query: 642 VAK 644
V K
Sbjct: 674 VGK 676
>gi|435849270|ref|YP_007311520.1| superfamily II helicase [Natronococcus occultus SP4]
gi|433675538|gb|AGB39730.1| superfamily II helicase [Natronococcus occultus SP4]
Length = 780
Score = 164 bits (415), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 177/712 (24%), Positives = 314/712 (44%), Gaps = 77/712 (10%)
Query: 14 EEFKFYLEEYAGVK-----GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE--NRIDEI 66
EEF Y E GV G Y T L K I + T EK + SL++ + + E+
Sbjct: 86 EEFAAY--ESFGVDVGVTTGNYESTDDWLAAKDIVVATSEK----VDSLVRNGASWLSEL 139
Query: 67 GLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVE 126
+V DE H++++ RGP LE ++K+ L +Q A+SAT+GN + ++ +++
Sbjct: 140 TCVVSDEVHLIDDRNRGPTLEVTLAKLRRLNPDLQTVALSATVGNADEIAEWLDAELVDT 199
Query: 127 NSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVL--HLVQGNLMVLI 184
+ RP V + +FD S E+ + G +A L +V+ L+
Sbjct: 200 DWRPIDLQMGVHYGNAL--NFDDGSTREVPVEG------GEKQEAALVRDIVREGGSSLV 251
Query: 185 FCSSKIACSNLALRL-QFDRFPGTKEYKKQEKEDLIE---ALKEENDGKLSTNLEECILY 240
F +S+ A RL Q ++E E+ DL E ++E++D + S +L +C+
Sbjct: 252 FVNSRRNAEAAARRLGQVT----SRELTDDERNDLAELADEIREDSDTETSADLADCVER 307
Query: 241 GVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRD------SYVG 294
G A+HHA L++ +R L+E+A+ L++I T TLAAGVN PA+RVI+RD S G
Sbjct: 308 GSAFHHAGLSSTQRSLVEDAFRERLLKVISATPTLAAGVNTPARRVIVRDWRRFDPSAGG 367
Query: 295 RDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLR-FSSMMNAGPEPISSHMDP-P 352
+ + QM+GRAGR GL GE+++L K+ + F + A PEP+ S + P
Sbjct: 368 MAPLDVLEIHQMMGRAGRPGLDPYGEAVLLAKSHDESEELFDRYVWADPEPVRSKLAAEP 427
Query: 353 TLVDLILEVVAANLCSSLEDVKTLIKHTLF-YQLKSPEDQQTFLETTLSEIVASLLASKG 411
L +L +A+ + E + + TL+ Q P +T ++ L + + +
Sbjct: 428 ALRTHVLATIASGFARTREGLLEFLGATLYASQSTEPGRLETVTDSVLDYLERNDFVERD 487
Query: 412 TMLTMNEAGHLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLE 471
+EAG + T+ A A G S D + + L + ++ L+ + +V LE
Sbjct: 488 RGDGSDEAG--AFTTAADLADDGGRSED----LEATSLGHTVSRLYLDPMSAATIVHGLE 541
Query: 472 ---------------YRIPSDGILLSRSKVYDRYTKFHPQTLRVAEALGVTENLVALNVT 516
R P L RS +++ + + + R +E LG +
Sbjct: 542 DADDRPTALGLYQLVSRTPDMYELYLRSGEDEKFGELYYE--RESELLG--------DAP 591
Query: 517 GKLKDEK-KALLCRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYR 575
+ ++++ + L +L D D+ +++ + Y I L+ ++ +
Sbjct: 592 SEFEEDRFEDWLAALKTGKLLEDWAQEDDEERITERYKIGPGDLRGKVDTAEWLLGAAES 651
Query: 576 FCEELPELWCYKQLLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIAR 635
E+ W + + + + + L L+ + GV RARQL G +
Sbjct: 652 LANEIDSEWTVA--VREARARVEHGVSEELLELVSVRGVGRKRARQLYAVGIEEPADLRT 709
Query: 636 ADAKEMVAKIRHLPLRSARNLISAAKLHFITKMDKVEAMKNLIQNLQKNYDN 687
AD ++ ++ ++A N++ A + MD VEA ++ + D
Sbjct: 710 ADKSVVLGALKG--EKTAENVLENAGREDPS-MDGVEADASVAATDSSDGDG 758
>gi|383320892|ref|YP_005381733.1| Superfamily II helicase [Methanocella conradii HZ254]
gi|379322262|gb|AFD01215.1| Superfamily II helicase [Methanocella conradii HZ254]
Length = 730
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 120/397 (30%), Positives = 197/397 (49%), Gaps = 40/397 (10%)
Query: 10 AKAAEEF-KFYLEEYAGVK-----GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRI 63
A A+E+F +F E GV+ G Y L + I + T EK L+ + +
Sbjct: 78 ALASEKFERFRQFETLGVRTGISTGDYDSRDEWLGDRDIIVATSEKADSLLRN--GAPWL 135
Query: 64 DEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGIT 123
+ ++V DE H+++ RGP LE ++++ L S+QI A+SATIGN L+ ++
Sbjct: 136 SSLTIVVADEVHLIDSANRGPTLEVTLARLRRLNPSLQIIALSATIGNAKELAGWMGAEL 195
Query: 124 YVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNL--- 180
V + RPT E V F G+++ + D ++ GPD VL LV L
Sbjct: 196 VVSDWRPTTLKEGV---------FFGRAIN--FQDE-KRVISTPGPDEVLALVSDTLAEG 243
Query: 181 -MVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECIL 239
++F +++ + +A ++ E +K +D+ + + + L C+
Sbjct: 244 GQCIVFTNTRKSSEGIAQKVAKSLSKKLTEEEKAAFQDIKQQVLRHAETDTCARLAACVE 303
Query: 240 YGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRD------SYV 293
+G A+HHA L RR++E+ + +++I CT TLAAG+NLPA+RVII+D +Y
Sbjct: 304 HGAAFHHAGLKNEHRRIVEDEFRRNRIKVIACTPTLAAGLNLPARRVIIKDYRRYDVNY- 362
Query: 294 GRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMN----AGPEPISSHM 349
G I + YKQM GRAGR GL GE++++ KT + +M+ + PE I+S +
Sbjct: 363 GSVPIPVLEYKQMAGRAGRPGLDPYGEAVLIAKTHDE---MGELMDNYVLSEPEHITSKL 419
Query: 350 DP-PTLVDLILEVVAANLCSSLEDVKTLIKHTLF-YQ 384
P L +L +A +LC D+ + T + YQ
Sbjct: 420 GTEPALRSHVLSAIATDLCRDESDLYDFMDTTFYAYQ 456
>gi|395644627|ref|ZP_10432487.1| ski2-type helicase [Methanofollis liminatans DSM 4140]
gi|395441367|gb|EJG06124.1| ski2-type helicase [Methanofollis liminatans DSM 4140]
Length = 726
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 164/618 (26%), Positives = 258/618 (41%), Gaps = 80/618 (12%)
Query: 37 LNKKSIYICTIEKGSKLIGSLIQEN--RIDEIGLIVIDEFHMLNEPQRGPILECVVSKVL 94
L + I + T EK + SL++ + +I L+V+DE H++ P RG LE V++K+L
Sbjct: 108 LGRNDIVVATSEK----VDSLLRNGAPWLSKITLLVVDECHLIGSPDRGATLEMVIAKLL 163
Query: 95 YLKKSIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTE 154
+Q+ A+SAT+GN A++ ++ RP VD R F+G
Sbjct: 164 MKNPGMQVIALSATVGNPGAIAGWLNAALVTSEWRP--------VDLREGVYFEGAIH-- 213
Query: 155 IYADNLDYSLTGSGP----DAVLHLVQGNLMVLIFCSSKIACSNLALRLQFDRFPGTKEY 210
+A+ D ++ G + VL V L+F SS+ A R G +
Sbjct: 214 -FAEREDRTVAGKSRYDDLNLVLDTVAEGGQCLVFVSSRRNAEAFAKRAA-----GGLKL 267
Query: 211 KKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIIC 270
+ + A++ E L L C+ G A+HHA L++ ER ++EE + G++++I
Sbjct: 268 SEPALDTASAAIEHEAQTDLGRTLALCVRNGAAFHHAGLSSAERHIVEEGFRNGSIRVIS 327
Query: 271 CTSTLAAGVNLPAQRVIIRD----SYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCK 326
T TLAAG+NLPA+RV+IRD G I + YKQM GRAGR L GE++++ K
Sbjct: 328 STPTLAAGLNLPARRVVIRDYLRFGDGGMAPIPVGEYKQMAGRAGRPHLDPYGEAVLIAK 387
Query: 327 T---MQDFLRFSSMMNAGPEPISSHMDPP-TLVDLILEVVAANLCSSLEDVKTLIKHTLF 382
T + D F + ++A PE I+S + L +L ++A C S DV + T F
Sbjct: 388 TADAVNDL--FENYIDAPPEEIASQCNAENALRSHVLSLIATAFCRSRPDVLAFMDRT-F 444
Query: 383 YQLKSPEDQQTFLETTLSEIVASLLASK------GTMLTMNEAGHLSLTSIAKAAVQAGL 436
Y + + T ET E V L K G L E G L +++ +
Sbjct: 445 YAYEHQGRRSTIHETI--ERVIDWLCDKEMVTALGDRLEATEYGTL----VSRLYIDPRS 498
Query: 437 SHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEYRIPSDGILLSRSKVYD---RYTKF 493
+ + D L +F L L L R P L R Y+ R+
Sbjct: 499 AETIV-----DALAKAPDFADLGLLETL-------ARTPDMLTLYLRKDDYEVIYRFIDE 546
Query: 494 HPQTLRVAEALGVTENLVALNVTGKLKDEKKALLCRFFHACILYDVLNFDNHQKVAKMYG 553
H L G DE +A C A +L + + + +
Sbjct: 547 HIDELWTGLPYG--------------DDEMQAFFCSVKTAMLLLNWSEEVTEAMICERFN 592
Query: 554 IQNSHLQNFLNVTSYFASKVYRFCEELPELWCYKQLLTDLPQTLMYCRAPNLRALMDLPG 613
+ + N + + R + Q + DL + + L L+ L G
Sbjct: 593 VGPGDIHNKVETAVWLIHAASRLASLFKR--PFAQPIADLEIRVKHGIKKELLPLIKLRG 650
Query: 614 VKIGRARQLLNAGYSSLE 631
+ RAR+L NAG ++ E
Sbjct: 651 IGRVRARRLFNAGLTTPE 668
>gi|119599919|gb|EAW79513.1| polymerase (DNA directed), theta, isoform CRA_d [Homo sapiens]
gi|119599920|gb|EAW79514.1| polymerase (DNA directed), theta, isoform CRA_d [Homo sapiens]
Length = 2270
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 133/474 (28%), Positives = 229/474 (48%), Gaps = 46/474 (9%)
Query: 214 EKEDLIEALKEEN--DGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICC 271
E+++L+E + + L + L++ + +GVA+HHA LT ER +IE A+ G ++++
Sbjct: 63 EQKELLEVMDQLRRLPSGLDSVLQKTVPWGVAFHHAGLTFEERDIIEGAFRQGLIRVLAA 122
Query: 272 TSTLAAGVNLPAQRVIIRDSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDF 331
TSTL++GVNLPA+RVIIR G + + YKQMVGRAGR G+ GESI++CK +
Sbjct: 123 TSTLSSGVNLPARRVIIRTPIFGGRPLDILTYKQMVGRAGRKGVDTVGESILICKNSEKS 182
Query: 332 LRFSSMMNAGPEPISSHMD-------PPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQ 384
+ +++ +P+ S + +++ ILE++ + S+ +D+ T T F
Sbjct: 183 -KGIALLQGSLKPVRSCLQRREGEEVTGSMIRAILEIIVGGVASTSQDMHTYAACT-FLA 240
Query: 385 LKSPEDQQTFLETTLS----------------EIVASLLASKGTMLTMNEAGHLSLTSIA 428
E +Q S E + S AS GT + HL
Sbjct: 241 ASMKEGKQGIQRNQESVQLGAIEACVMWLLENEFIQSTEASDGTEGKVYHPTHL-----G 295
Query: 429 KAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEYRIPSDGILLSRSKVYD 488
A + + LS L I++DL F L N LH+L+LV P+ D + + +
Sbjct: 296 SATLSSSLSPADTLDIFADLQRAMKGFVLENDLHILYLVTPMF----EDWTTIDWYRFFC 351
Query: 489 RYTKFHPQTLRVAEALGVTENLVALNVTGKL------KDEKKALLCRFFHACILYDVLNF 542
+ K RVAE +GV E +A V GK+ + + A+ RFF + +L D+++
Sbjct: 352 LWEKLPTSMKRVAELVGVEEGFLARCVKGKVVARTERQHRQMAIHKRFFTSLVLLDLISE 411
Query: 543 DNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELWCYKQ-LLTDLPQTLMYCR 601
+++ + YG +Q+ + +A + F L W + LL+ + L +
Sbjct: 412 VPLREINQKYGCNRGQIQSLQQSAAVYAGMITVFSNRLG--WHNMELLLSQFQKRLTFGI 469
Query: 602 APNLRALMDLPGVKIGRARQLLNAGYSSLELIARADAKEMVAKIRH-LPLRSAR 654
L L+ + + RAR L +G+ ++ +ARA+ E+ +++ +P +SAR
Sbjct: 470 QRELCDLVRVSLLNAQRARVLYASGFHTVADLARANIVEVEVILKNAVPFKSAR 523
>gi|448307307|ref|ZP_21497205.1| ski2-like helicase, partial [Natronorubrum bangense JCM 10635]
gi|445595975|gb|ELY50072.1| ski2-like helicase, partial [Natronorubrum bangense JCM 10635]
Length = 686
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 159/604 (26%), Positives = 282/604 (46%), Gaps = 59/604 (9%)
Query: 15 EFKFYLEEYA---GVK-GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE--NRIDEIGL 68
EF+ Y EE+ GV G Y T L K I + T EK + SL++ + + E+
Sbjct: 87 EFEAY-EEFGVTVGVTTGNYESTSEWLATKDIIVATSEK----VDSLVRNGADWLSELTC 141
Query: 69 IVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVENS 128
+V DE H++++ RGP LE ++K+ L +Q+ A+SAT+GN + ++ +++ +
Sbjct: 142 VVSDEVHLIDDRNRGPTLEVTLAKLRRLNPGMQVVALSATVGNADEIADWLDAALVDTDW 201
Query: 129 RPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSS 188
RP V + +FD S E+ + + V +++ L+F +S
Sbjct: 202 RPIDLQMGVHYGNAL--NFDDGSTREVPVEGSEKQEAA----LVRDILEEGGSSLVFVNS 255
Query: 189 KIACSNLALRLQFDRFPGTKEYKKQEKEDLIE---ALKEENDGKLSTNLEECILYGVAYH 245
+ A RL T+E E+ +L E ++E++D + ST+L +C+ G A+H
Sbjct: 256 RRNAEAAARRLGQ---VSTRELTNDERAELTELAEKIREDSDTETSTDLADCVEQGAAFH 312
Query: 246 HADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRD------SYVGRDFIS 299
HA L++ +R L+E+A+ L++I T TLAAGVN PA+RVI+RD S G +
Sbjct: 313 HAGLSSTQRTLVEDAFRDRLLKVISATPTLAAGVNTPARRVIVRDWRRFDPSAGGMAPLD 372
Query: 300 LNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLR-FSSMMNAGPEPISSHMDP-PTLVDL 357
+ QM+GRAGR GL GE+++L K+ +D F + A PE + S + P L
Sbjct: 373 VLEVHQMMGRAGRPGLDPYGEAVLLAKSHEDSQELFDRYIWAEPEAVRSKLAAEPALRTH 432
Query: 358 ILEVVAANLCSSLEDVKTLIKHTLFYQLKSPEDQ-QTFLETTLSEIVAS-LLASKGTMLT 415
+L +A+ + E++ ++ TL+ + + + ET L + ++ + +G T
Sbjct: 433 VLATIASGFARTREELLEFLEATLYASQSTEAGRLEQVTETVLQYLESNDFIEREGGTET 492
Query: 416 MNEAGHLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLE---Y 472
++AG + TS A A Q D L S L + ++ L+ + +V LE
Sbjct: 493 TDDAG--AFTSAADLAAQQSAQTDERLEATS--LGHTVSRLYLDPMSAAEIVHGLEDADE 548
Query: 473 RIPSDGI--LLSRS-KVYDRYTKFHPQTL-------RVAEALGVTENLVALNVTGKLKDE 522
R + G+ L+SR+ +Y+ Y + R AE LG + + +D+
Sbjct: 549 RPTALGLYQLVSRTPDMYELYLRSGEDDTFGELFYEREAELLG--------DAPSEYEDD 600
Query: 523 K-KALLCRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELP 581
+ + L +L D + D+ +++ + Y I L+ ++ + E+
Sbjct: 601 RFEDWLAALKTGKLLADWASEDDEEQLTERYKIGPGDLRGKVDTAEWLLGAAESLAREID 660
Query: 582 ELWC 585
W
Sbjct: 661 SEWT 664
>gi|62089320|dbj|BAD93104.1| DNA polymerase theta variant [Homo sapiens]
Length = 2214
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 131/456 (28%), Positives = 222/456 (48%), Gaps = 44/456 (9%)
Query: 230 LSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIR 289
L + L++ + +GVA+HHA LT ER +IE A+ G ++++ TSTL++GVNLPA+RVIIR
Sbjct: 25 LDSVLQKTVPWGVAFHHAGLTFEERDIIEGAFRQGLIRVLAATSTLSSGVNLPARRVIIR 84
Query: 290 DSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHM 349
G + + YKQMVGRAGR G+ GESI++CK + + +++ +P+ S +
Sbjct: 85 TPIFGGRPLDILTYKQMVGRAGRKGVDTVGESILICKNSEKS-KGIALLQGSLKPVRSCL 143
Query: 350 D-------PPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQLKSPEDQQTFLETTLS-- 400
+++ ILE++ + S+ +D+ T T F E +Q S
Sbjct: 144 QRREGEEVTGSMIRAILEIIVGGVASTSQDMHTYAACT-FLAASMKEGKQGIQRNQESVQ 202
Query: 401 --------------EIVASLLASKGTMLTMNEAGHLSLTSIAKAAVQAGLSHDVCLIIYS 446
E + S AS GT + HL A + + LS L I++
Sbjct: 203 LGAIEACVMWLLENEFIQSTEASDGTEGKVYHPTHL-----GSATLSSSLSPADTLDIFA 257
Query: 447 DLLHNKLNFCLLNSLHMLFLVIPLEYRIPSDGILLSRSKVYDRYTKFHPQTLRVAEALGV 506
DL F L N LH+L+LV P+ D + + + + K RVAE +GV
Sbjct: 258 DLQRAMKGFVLENDLHILYLVTPMF----EDWTTIDWYRFFCLWEKLPTSMKRVAELVGV 313
Query: 507 TENLVALNVTGKL--KDEKK----ALLCRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQ 560
E +A V GK+ + E++ A+ RFF + +L D+++ +++ + YG +Q
Sbjct: 314 EEGFLARCVKGKVVARTERQHRQMAIHKRFFTSLVLLDLISEVPLREINQKYGCNRGQIQ 373
Query: 561 NFLNVTSYFASKVYRFCEELPELWCYKQ-LLTDLPQTLMYCRAPNLRALMDLPGVKIGRA 619
+ + +A + F L W + LL+ + L + L L+ + + RA
Sbjct: 374 SLQQSAAVYAGMITVFSNRLG--WHNMELLLSQFQKRLTFGIQRELCDLVRVSLLNAQRA 431
Query: 620 RQLLNAGYSSLELIARADAKEMVAKIRH-LPLRSAR 654
R L +G+ ++ +ARA+ E+ +++ +P +SAR
Sbjct: 432 RVLYASGFHTVADLARANIVEVEVILKNAVPFKSAR 467
>gi|146304140|ref|YP_001191456.1| DEAD/DEAH box helicase [Metallosphaera sedula DSM 5348]
gi|145702390|gb|ABP95532.1| DEAD/DEAH box helicase domain protein [Metallosphaera sedula DSM
5348]
Length = 700
Score = 163 bits (413), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 164/624 (26%), Positives = 277/624 (44%), Gaps = 82/624 (13%)
Query: 28 GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQEN--RIDEIGLIVIDEFHMLNEPQRGPI 85
G Y L++ I + T EK + SL + N + E ++DEFH LN+ +RGP+
Sbjct: 106 GDYDTDDAFLSRYDIVVTTYEK----LDSLWRHNPSWLKESDYFILDEFHYLNDGKRGPV 161
Query: 86 LECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQ 145
+E V + K + +SAT+ N +A++ ++ N RP E + V+ R
Sbjct: 162 VESVAVR----SKRRNLLGLSATVSNADAIAEWLNATPVKTNWRPVPLKEGILVNDR--- 214
Query: 146 SFDGKSLTEIYADNLDYSLTGSGPDAVL----HLVQGNLMVLIFCSSKIACSNLALRLQF 201
+ Y D + L G+ D +L +V+ VL+F +S+ A ++
Sbjct: 215 -----KIVLTYTDGVSIQLKGN--DGILAYTKKIVEEGGQVLVFRNSRKMAETTARKIAE 267
Query: 202 DRFPGTKEYKKQEKEDLIEALKE-ENDGKLSTN-LEECILYGVAYHHADLTAGERRLIEE 259
FP KK+E ED++ L+E E+ G N L E + GVA+HHA L+ G R LIEE
Sbjct: 268 LNFP----LKKKEVEDIVSRLREVEDAGSEERNTLAELMSRGVAFHHAGLSKGLRDLIEE 323
Query: 260 AYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSY------VG-RDFISLNMYKQMVGRAGR 312
+ +++I T TLAAGVNLPA+ V++ D Y +G ++ IS+ YKQM GRAGR
Sbjct: 324 GFRRRVIKVITATPTLAAGVNLPARAVVVGDIYRFNRKILGFQEEISVMEYKQMSGRAGR 383
Query: 313 TGLQESGESIMLCKTMQDFLRFS-SMMNAGPEPISSHMDPPTLVDLILEVVAANLCSSLE 371
G GE++++ + +D R + + + PEP+ S + + L +A+ ++ E
Sbjct: 384 PGYDSEGEAVIVVRNRKDSERIAKKYILSPPEPLESRLGNESAFYSFLLGLASEDGANEE 443
Query: 372 DVKTLIKHTLFYQLKSPEDQQTFLETTLSEIVASLLASKGTMLTMNEAGHLSLTSIAKAA 431
V+T+ + T E +T+LET L+ + + S G + LT +
Sbjct: 444 FVRTMAQETFLDH----ELVKTYLETGLNWLRENEFLSDG----------VKLTKFGRRV 489
Query: 432 VQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEYRIPSDGILLSRSKVYDRYT 491
++ +I L ++ C + LHML L DG + + SK
Sbjct: 490 ADLYINPFTAKLIKDTLSMSEAENCDIPYLHMLALT--------PDGPIANVSK------ 535
Query: 492 KFHPQTLRVAEALGVTENLVALNVTGKLKDEKKALLCRFFH----ACILYDVLNFDNHQK 547
E + E T DE +A ++F A I++D + +
Sbjct: 536 ---------PEEDDLLEWAPCPPFTDVPDDEDEAF--QYFSALKIALIVHDWIEEVDEDA 584
Query: 548 VAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELWCYKQLLTDLPQTLMYCRAPNLRA 607
+ YGI + L++ + + Y+ + L E + ++ L + + +L
Sbjct: 585 ILSKYGIGSGDLRSIVETMEWLTYSGYQVSKAL-EWESHADIMFLLNRRVSDGVKEDLLD 643
Query: 608 LMDLPGVKIGRARQLLNAGYSSLE 631
L+ +PG+ R R L G + E
Sbjct: 644 LVRVPGIGRKRGRLLYQNGLTKPE 667
>gi|282165455|ref|YP_003357840.1| Holliday junction migration helicase [Methanocella paludicola
SANAE]
gi|282157769|dbj|BAI62857.1| Holliday junction migration helicase [Methanocella paludicola
SANAE]
Length = 731
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 171/661 (25%), Positives = 289/661 (43%), Gaps = 74/661 (11%)
Query: 10 AKAAEEF-KFYLEEYAGVK-----GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRI 63
A A+E+F +F E GV+ G Y L + I + T EK L+ + +
Sbjct: 78 ALASEKFERFRQFEGLGVRAGISTGDYDSKDEWLKDRDIIVATSEKTDSLLRN--GAPWL 135
Query: 64 DEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGIT 123
+ ++V DE H+++ RGP LE ++K+ L ++QI A+SATIGN L+ +++
Sbjct: 136 SSLTVVVADEVHLIDSANRGPTLEVTLAKLKRLNPALQIIALSATIGNAKELADWMKAQL 195
Query: 124 YVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNL--- 180
V RPT+ E V F G++ I N + GPD V LV L
Sbjct: 196 VVSEWRPTELKEGV---------FFGRA---INFSNDKRVIKTPGPDDVQALVSDTLAEG 243
Query: 181 -MVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKE-----ENDGKLSTNL 234
++F +++ + ++A +L +++ ++EK +E ++ E D L
Sbjct: 244 GQCIVFANTRKSSESIAQKLAKSL---SRKMTEEEKAAFLEVKQQVMRHAETD--TCAKL 298
Query: 235 EECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRD---- 290
C+ +GVA+HHA L R +IE A+ T+++I CT TLAAG+NLPA+RVIIRD
Sbjct: 299 AACVEHGVAFHHAGLKGEHRHIIENAFRKNTVKVIACTPTLAAGLNLPARRVIIRDYRRF 358
Query: 291 --SYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRF-SSMMNAGPEPISS 347
+Y G I + YKQM GRAGR GL GE++++ K + + + + PE I+S
Sbjct: 359 DVNY-GNVPIPVLEYKQMAGRAGRPGLDPYGEAVLIAKNYDELGELMENYVLSLPEQITS 417
Query: 348 HMDP-PTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQLKSPEDQQTFLETTLSEIVASL 406
+ P + +L +A + C + + + T + Q+ L + ++ L
Sbjct: 418 KLGTEPAMRAHVLSAIATDFCGDVIGLNEFMDTTFYAH------QRGDLSAVIDNVLDFL 471
Query: 407 LASKGTMLTMNEAGHLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFL 466
A + + + A L T + + + + II L +K N+ L
Sbjct: 472 EAER---MIIRTADRLRATELGRLTSRLYIDPLSASIIVRALEASKKRQEPYNTEMALLQ 528
Query: 467 VIPLEYRIPSDGILLSRSKVYDRYTKFHPQTLRVAEALGVTENLVALNVTGKLKDEKKAL 526
+I + S + S +YT H +++ L + G D +A
Sbjct: 529 LIASTPDVKSLYLRRSDYGWIIKYTDEH-----------ISDFLTDVPDVGDETD-FEAF 576
Query: 527 LCRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELWCY 586
L A ++ +N N +++ Y I ++N + + L
Sbjct: 577 LSSVKTAALVDMWVNEKNEEEMTAFYNIGPGDVRNLMETCVWLMHSTAEISHLL------ 630
Query: 587 KQLLT----DLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIARADAKEMV 642
K LT +L + Y + L L++L GV RAR+L AGY + E + D + +
Sbjct: 631 KAPLTREARELAVRIDYGVSKELMDLIELEGVGRVRARRLYEAGYKNREALKHVDLQVLA 690
Query: 643 A 643
A
Sbjct: 691 A 691
>gi|448389137|ref|ZP_21565549.1| ski2-like helicase [Haloterrigena salina JCM 13891]
gi|445669041|gb|ELZ21656.1| ski2-like helicase [Haloterrigena salina JCM 13891]
Length = 803
Score = 162 bits (409), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 116/388 (29%), Positives = 196/388 (50%), Gaps = 25/388 (6%)
Query: 14 EEFKFYLEEYA---GVK-GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE--NRIDEIG 67
EEF+ Y EE+ GV G Y T L K I + T EK + SL++ + + E+
Sbjct: 86 EEFEAY-EEFGVTTGVTTGNYESTDDWLATKDIIVATSEK----VDSLVRNGADWLSELT 140
Query: 68 LIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVEN 127
+V DE H++++ RGP LE ++K+ L +Q+ A+SAT+GN + ++ +++ +
Sbjct: 141 CVVSDEVHLIDDRNRGPTLEVTLAKLRQLNPGMQVVALSATVGNADEIADWLDAALVDTD 200
Query: 128 SRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCS 187
RP V + +FD S E+ + + V ++Q L+F +
Sbjct: 201 WRPIDLQMGVHYGNAL--NFDDGSTREVPVEGSEKQEAA----LVRDILQEGGSSLVFVN 254
Query: 188 SKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHA 247
S+ A RL E ++ E DL + +++++D + S +L +C+ G A+HHA
Sbjct: 255 SRRNAEGAAKRLGQVSSREITEDERAELADLADDIRDDSDTETSADLADCVERGAAFHHA 314
Query: 248 DLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRD------SYVGRDFISLN 301
L++ +R L+E+A+ L++I T TLAAGVN PA+RVI+RD S G + +
Sbjct: 315 GLSSTQRSLVEDAFRDRLLKVISATPTLAAGVNTPARRVIVRDWRRFDPSAGGMAPLDVL 374
Query: 302 MYKQMVGRAGRTGLQESGESIMLCKTMQDFLR-FSSMMNAGPEPISSHMDP-PTLVDLIL 359
QM+GRAGR GL GE+++L K+ + F + A PEP+ S + P L +L
Sbjct: 375 EVHQMMGRAGRPGLDPYGEAVLLAKSHDESEELFDRYIWADPEPVRSKLAAEPALRTHVL 434
Query: 360 EVVAANLCSSLEDVKTLIKHTLFYQLKS 387
+A+ + + ++ TL+ S
Sbjct: 435 ATIASGFARTRGGLLEFLEATLYASQSS 462
>gi|407394204|gb|EKF26842.1| ATP-dependent RNA helicase, putative [Trypanosoma cruzi
marinkellei]
Length = 522
Score = 162 bits (409), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 127/452 (28%), Positives = 208/452 (46%), Gaps = 46/452 (10%)
Query: 234 LEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYV 293
L + + +GVA+HH L ER LIE AY + I+CCTSTLAAGVNLPA+RVI + YV
Sbjct: 27 LSQLLPHGVAFHHGGLLGEERELIERAYRQREINILCCTSTLAAGVNLPARRVIFKTPYV 86
Query: 294 GRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHM--DP 351
GRDF++ + Y QM GRAGR GL E GES +L + +D R +M E +S M
Sbjct: 87 GRDFLTKSRYLQMCGRAGRAGLDEFGESFLLL-SRRDCHRGRELMRQEVEMCTSQMLSQA 145
Query: 352 PTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQLKSPEDQ-------------QTFLETT 398
+LE VA + S + + + + + P D + L+++
Sbjct: 146 SAFERALLECVAVGVIRSPSAAQAWMANLMCHHAAGPFDPVYDVASKPLPVALEDILQSS 205
Query: 399 LSEIVASLLASK----------GTMLTMNEAGH------LSLTSIAKAAVQAGLSHDVCL 442
+ +++ S L + G T AG+ LS T +V++ S + L
Sbjct: 206 MDQLIRSGLVQRVSLRQETNEGGDAATTQPAGNDDEHVSLSATPFGACSVRSCFSIEEAL 265
Query: 443 IIYSDLLH-NKLNFCLLNSLHMLFLVIPLEYRIPSDGILLSRSKVYDRYTKFHPQTLRVA 501
++ +L + + L + LH+ + + PL + S + + R+A
Sbjct: 266 LVRGELENLQRTGLILADDLHLCYFLTPLREIGECNW-----SAYCEVLAQMSENRQRIA 320
Query: 502 EALGVTENLVALNVTGKLKD------EKKALLCRFFHACILYDVLNFDNHQKVAKMYGIQ 555
+GV E V G L D + RFF A +L D+L+ V + Y
Sbjct: 321 NMVGVDEFFVHQRSMG-LGDPYGGNGSRTFATRRFFVALMLADLLSEVPMSVVERRYQCN 379
Query: 556 NSHLQNFLNVTSYFASKVYRFCEELPELWCYKQLLTDLPQTLMYCRAPNLRALMDLPGVK 615
LQ+ + S F+S + FC + E + + +L+ + L + P++ LM++ G++
Sbjct: 380 RGQLQSLMRSASMFSSSITSFCRAM-EWFSLEAVLSSYVKRLGFGVKPDIVPLMEIRGLQ 438
Query: 616 IGRARQLLNAGYSSLELIARADAKEMVAKIRH 647
RAR L AG+ IA + E++ ++++
Sbjct: 439 PARARALWAAGFKDPAAIAASTPGELLQRVKN 470
>gi|327310021|ref|YP_004336918.1| ATP-dependent, DNA binding helicase [Thermoproteus uzoniensis
768-20]
gi|326946500|gb|AEA11606.1| ATP-dependent, DNA binding helicase [Thermoproteus uzoniensis
768-20]
Length = 716
Score = 161 bits (408), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 117/381 (30%), Positives = 190/381 (49%), Gaps = 25/381 (6%)
Query: 16 FKFY--LEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDE 73
F +Y L + A G+Y L+K + I T EK L+ + + ++++GLI +DE
Sbjct: 87 FSYYGDLVDVAVSTGEYDSDDAWLHKYDVVITTYEKLDSLLRH--RPSWLNKVGLIALDE 144
Query: 74 FHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVENSRPTKH 133
H + +P+RGP+LE + +KV YL QI A+SATIGN AL+ ++ + RP
Sbjct: 145 IHYVGDPKRGPVLESIAAKVKYLGLKAQIVALSATIGNPEALAKWLGARLVKSDWRPVPL 204
Query: 134 SEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHL--VQGNLMVLIFCSSKIA 191
E V D + Q DG ++ + G+ P+ L L V+ L+F +S+ A
Sbjct: 205 MEGVYADGAI-QYADG---------SVRHIPKGADPEVALALDAVENGGQALVFVNSRSA 254
Query: 192 CSNLALRLQFDRFPGTKEYKKQE-KEDLIEALKEENDGK-LSTNLEECILYGVAYHHADL 249
+ A R+ G + E DL ++E K + L E + GVA+H+A L
Sbjct: 255 TVSTARRIAEAVAAGGRRLIDPEAAADLAAKVEEAAASKIIGRELAEVVARGVAFHNAGL 314
Query: 250 TAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIR-----DSYVGRDFISLNMYK 304
RR++EE + G ++++ T+TLAAGVNLPA+RV+I D G + I + Y+
Sbjct: 315 ELELRRIVEEGFRKGVIKVVVSTTTLAAGVNLPARRVVIAELRRYDPLTGVEEIPVMEYR 374
Query: 305 QMVGRAGRTGLQESGESIMLCKTMQDF-LRFSSMMNAGPEPISSHM-DPPTLVDLILEVV 362
QM GRAGR GL GE++ + + ++ + EP+ S + L +L VV
Sbjct: 375 QMAGRAGRPGLDPYGEAVAIASSEREAEYIMERYIKGAIEPVRSQLFSDVNLRSHLLGVV 434
Query: 363 AANLCSSLEDVKTLIKHTLFY 383
+ ++ +++ + TL Y
Sbjct: 435 GSGYANTEDEIVDYLSATLAY 455
>gi|159040904|ref|YP_001540156.1| DEAD/DEAH box helicase [Caldivirga maquilingensis IC-167]
gi|226740604|sp|A8MB76.1|HELS_CALMQ RecName: Full=Putative ski2-type helicase
gi|157919739|gb|ABW01166.1| DEAD/DEAH box helicase domain protein [Caldivirga maquilingensis
IC-167]
Length = 756
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 176/677 (25%), Positives = 300/677 (44%), Gaps = 52/677 (7%)
Query: 15 EFKFYLE---EYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVI 71
+F Y E A G Y + L + I T EK L+ ++ + I +G ++I
Sbjct: 88 DFNTYSELGIRVAASTGDYNSEDKWLGSYDVIITTYEKLDSLL--RLKPSWIWNVGQLII 145
Query: 72 DEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVENSRPT 131
DE H +N+ +RGPI+E +V+K+ L + QI +SATIGN L+ ++ + RP
Sbjct: 146 DEIHFINDDERGPIIESIVAKLRMLNLNPQIIGLSATIGNPEELANWLNAKLVKSDWRPV 205
Query: 132 KHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNL----MVLIFCS 187
E V V DG+ ++G G D++++L L VL+F S
Sbjct: 206 SLREGVYHKGVVTYVNDGEK-----------RISGQG-DSLINLTVDTLNDGGQVLVFSS 253
Query: 188 SKIACSNLALRL-QFDRFPGTKEYKKQEKEDLIEALKEENDGK-LSTNLEECILYGVAYH 245
S+ +A +L ++ + E L E ++E + + L+ L I GV++H
Sbjct: 254 SRQGAVRIARKLAEYICSSPVRYIDPGEAGKLAEEVRETSSSRILAEELTGLIKCGVSFH 313
Query: 246 HADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVII---RDSYVGRDFISLNM 302
HA L RR+IEE + G L+++ T+TLAAGVNLPA+RVI+ R G FI + +
Sbjct: 314 HAGLELEVRRVIEEGFRRGVLRVLASTTTLAAGVNLPARRVIVNEYRRYEPGYGFIEIPV 373
Query: 303 --YKQMVGRAGRTGLQESGESIMLCKTMQ--DFLRFSSMMNAGPEPISSH-MDPPTLVDL 357
YKQM GRAGR GL GE+I++ + D++ + + PE + S+ M+P +L
Sbjct: 374 MEYKQMAGRAGRPGLDPYGEAIIIVSSKDEVDYV-IDKYIKSPPEYVKSNFMNPTSLKFH 432
Query: 358 ILEVVAANLCSSLEDVKTLIKHTL--FYQLKSPEDQQTFLETTLSEIVASLLASKGTMLT 415
L VA+ +++++ +T F S Q + +S I+ L+
Sbjct: 433 TLSAVASQYAETIDELVKFTSNTFAGFQGKLSAMIQANSVRRMISRIIDELVDYG---FI 489
Query: 416 MNEAGHLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEYRIP 475
+ L T + + L D + L N + LN+ ++ +V +IP
Sbjct: 490 IRNGDKLEATEVGAVVNRMYLDPDTAHVFIMG-LRNLNSDADLNAYSLMLVV--KSPKIP 546
Query: 476 SDGILLSRSKVYDRYTKFHPQTLRVAEALGVTENLVALNVTGKLKDEKKALLCRFFHACI 535
+ + R+++ + + + + LV ++ + L F A
Sbjct: 547 K--VKVRRNELDELAQQAASMWSSIPLKPSDVDELV------NYPEDYEDFLSEFKTAMA 598
Query: 536 LYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELWCYKQLLTDLPQ 595
L + +N N ++ K Y +Q L+ + + + L L L
Sbjct: 599 LLEWINESNEDQIMKTYDVQPGDLRVLSDQAEWLIGALQELARTLGLSGNVVNGLRALRY 658
Query: 596 TLMYCRAPNLRAL-MDLPGVKIGRARQLLNAGYSSLELIARADAKEMVAKIRHLPLRSAR 654
+ Y L L ++L GV RAR L AGY S+E +A+A+ ++ +IR + + A
Sbjct: 659 RVKYGVNDELLELVVNLEGVGRVRARALYAAGYRSIEDLAKANVSDL-TRIRGIGDKIAG 717
Query: 655 NLISAAKLHFITKMDKV 671
++I A H + K +V
Sbjct: 718 SIIEQA--HQLVKDGRV 732
>gi|433593001|ref|YP_007282497.1| superfamily II helicase [Natrinema pellirubrum DSM 15624]
gi|448335448|ref|ZP_21524592.1| ski2-like helicase [Natrinema pellirubrum DSM 15624]
gi|433307781|gb|AGB33593.1| superfamily II helicase [Natrinema pellirubrum DSM 15624]
gi|445616838|gb|ELY70450.1| ski2-like helicase [Natrinema pellirubrum DSM 15624]
Length = 790
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 118/391 (30%), Positives = 198/391 (50%), Gaps = 31/391 (7%)
Query: 14 EEFKFYLEEYA---GVK-GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE--NRIDEIG 67
E F+ Y EE+ GV G Y T L K I + T EK + SL++ + + E+
Sbjct: 86 EAFEAY-EEFGVTVGVTTGNYESTSDWLATKDIVVATSEK----VDSLVRNGADWLSELT 140
Query: 68 LIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVEN 127
+V DE H++++ RGP LE ++K+ L +Q A+SAT+GN + ++ +++ +
Sbjct: 141 CVVSDEVHLIDDRNRGPTLEVTLAKLRKLNPGMQQVALSATVGNADEIADWLDAALIDTD 200
Query: 128 SRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDA---VLHLVQGNLMVLI 184
RP +D R+ + G +L + + GS V +V+ L+
Sbjct: 201 WRP--------IDLRMGVHY-GNALNFDDGSTREVPIQGSEKQEAALVRDIVREGGSSLV 251
Query: 185 FCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAY 244
F +S+ A RL P ++ E DL + +++++D + ST+L +C+ G A+
Sbjct: 252 FVNSRRNAEAAAGRLGGVVKPELTGDERAELADLADEIRDDSDTETSTDLADCVERGAAF 311
Query: 245 HHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRD------SYVGRDFI 298
HHA L++ +R ++EEA+ L++I T TLAAGVN PA+RVI+RD S G +
Sbjct: 312 HHAGLSSTQRSIVEEAFRDRLLKVISATPTLAAGVNTPARRVIVRDWRRFDPSAGGMAPL 371
Query: 299 SLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLR-FSSMMNAGPEPISSHMDP-PTLVD 356
+ QM+GRAGR GL GE+++L K+ + F + A PEP+ S + P L
Sbjct: 372 DVLEVHQMMGRAGRPGLDPYGEAVLLAKSHDESQELFDRYIWADPEPVRSKLAAEPALRT 431
Query: 357 LILEVVAANLCSSLEDVKTLIKHTLFYQLKS 387
+L +A+ + E + ++ TL+ S
Sbjct: 432 HVLATIASGFARTREGLLEFLEATLYASQSS 462
>gi|325968722|ref|YP_004244914.1| DEAD/DEAH box helicase [Vulcanisaeta moutnovskia 768-28]
gi|323707925|gb|ADY01412.1| DEAD/DEAH box helicase domain protein [Vulcanisaeta moutnovskia
768-28]
Length = 768
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 178/679 (26%), Positives = 310/679 (45%), Gaps = 68/679 (10%)
Query: 13 AEEFKFYLEEYAGVK-----GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIG 67
A + + Y E GV+ G+Y L I + T EK L+ + + + ++G
Sbjct: 92 ARDLRIY--EKLGVRIAVTTGEYDKEDAWLMNYDIVVTTYEKLDSLLRHKV--DWLKQVG 147
Query: 68 LIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVEN 127
+++IDE H +++ +RGP +E +++KV L S+Q+ A+SAT+GN ++ +++ V +
Sbjct: 148 ILIIDEIHYIDDDKRGPTIESIIAKVKSLGLSMQLLALSATVGNAEEIAKYLDAELVVSD 207
Query: 128 SRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLM----VL 183
RP K E V D ++ YAD + + VL LV + L
Sbjct: 208 WRPVKLREGVYYDGVIY-----------YADGSREPIKDL-ENPVLSLVMDTIFNGGQTL 255
Query: 184 IFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIE---ALKEENDGK-LSTNLEECIL 239
+F SS+ + + L Q + K E +L++ A+ E + K L L + +
Sbjct: 256 VFTSSR--SNTVKLSQQIAHYICNYNVKIIEPRELMKVSNAILETSQSKLLGEELAKIVR 313
Query: 240 YGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIR-----DSYVG 294
GVA+HHA L R ++E ++ ++ + T+TLAAGVNLPA+RVII + G
Sbjct: 314 CGVAFHHAGLDMDVRSIVENSFRDRLIKAVVATTTLAAGVNLPARRVIIHEYRRYEPGFG 373
Query: 295 RDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQ--DFLRFSSMMNAGPEPISSH-MDP 351
+ + + YKQM GRAGR GL GE+I++ ++ D+L + +NA E + S +
Sbjct: 374 MEELPIMEYKQMAGRAGRPGLDPYGEAILIARSEDEVDYL-IRNYINARVEDVKSKFLTD 432
Query: 352 PTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQLKSPEDQQTFLETTLSEIVASLLASKG 411
L IL +A+ +++DV I TL Y ++ + FL L + +L
Sbjct: 433 KNLATHILSAIASGYALNIDDVMRFISSTLGY-IQGGFHRNEFLRDLLRRKIDDVLN--- 488
Query: 412 TMLTMNEAGHLSLTSIAKAAVQAGLSHDVCLI------IYSDLLHNKLNFCLLNSLHMLF 465
+ E+G L + AA G + + +Y L ++ L H++
Sbjct: 489 ---FLVESGFLERRNNDVAATALGSLLNTLYLDPYTANVYIRGLRSRNETNDLGYTHLII 545
Query: 466 LVIPLEYRIPSDGILLSRSKVYDRYTKFHPQTLRVAEALGVTENLVALNV-TGKLKDEK- 523
+ P L R +D Y + L + L + ++ + G+ +DE+
Sbjct: 546 -------QSPEVPKLRVRRNEFDDYIEL---VLDNWDYLLIKPSITRDEIENGEFEDEEI 595
Query: 524 KALLCRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPEL 583
+ L A +L D N + ++ K Y + L+ + ++ ++ AS V R + +
Sbjct: 596 EDYLSTIKTAVMLLDWANEVSEDELYKNYDVGPGDLRVYSDLMNWLASAVTRLAGAIG-M 654
Query: 584 WCYKQLLTDLPQTLMYCRAPNLRAL-MDLPGVKIGRARQLLNAGYSSLELIARADAKEMV 642
+++ L L L+Y L L ++L GV RAR L +AG+ + IA AD K +
Sbjct: 655 RKHEERLNVLRWRLIYGVKEELIELVINLEGVGRTRARALYDAGFKDIADIANADPK-AI 713
Query: 643 AKIRHLPLRSARNLISAAK 661
+ IR R A ++I A+
Sbjct: 714 SIIRGFGDRLAHSIIEQAR 732
>gi|429191491|ref|YP_007177169.1| superfamily II helicase [Natronobacterium gregoryi SP2]
gi|448325375|ref|ZP_21514767.1| ski2-like helicase [Natronobacterium gregoryi SP2]
gi|429135709|gb|AFZ72720.1| superfamily II helicase [Natronobacterium gregoryi SP2]
gi|445615582|gb|ELY69226.1| ski2-like helicase [Natronobacterium gregoryi SP2]
Length = 784
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 156/646 (24%), Positives = 287/646 (44%), Gaps = 58/646 (8%)
Query: 13 AEEFKFYLEEYAG-------VKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE--NRI 63
A E K E Y G G Y T L K I + T EK + SL++ + +
Sbjct: 81 ASEKKAEFEAYEGFGITVGVTTGNYESTSDWLATKDIVVATSEK----VDSLVRNGADWL 136
Query: 64 DEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGIT 123
++ +V DE H++++ RGP LE ++K+ L ++Q A+SAT+GN + ++ +++
Sbjct: 137 SDLTCVVSDEVHLIDDRNRGPTLEVTLAKLRQLNPNLQTVALSATVGNADEIAAWLDAEL 196
Query: 124 YVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVL 183
+ RP V + +FD S E+ + + V ++Q L
Sbjct: 197 VDRDWRPIDLKMGVHYGNAL--NFDDGSTREVPVEGSERQEAA----LVRDILQEGGSSL 250
Query: 184 IFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVA 243
+F +S+ A RL G ++ +++ E +++++D + ST+L C+ G A
Sbjct: 251 VFVNSRRNAEAAADRLGGVAKTGLTADERTALDEIAEQIRDDSDTETSTDLANCVERGAA 310
Query: 244 YHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRD------SYVGRDF 297
+HHA L++ +R L+E+A+ L++I T TLAAGVN PA+RVI+RD + G
Sbjct: 311 FHHAGLSSTQRSLVEDAFRDRLLKVISATPTLAAGVNTPARRVIVRDWRRFDPTAGGMTP 370
Query: 298 ISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLR-FSSMMNAGPEPISSHMDP-PTLV 355
+ + QM+GRAGR GL GE++++ K + F + PEP+ S + P L
Sbjct: 371 LDVLEIHQMMGRAGRPGLDPYGEAVLVAKNHDESEELFDRYVWGDPEPVQSKLAAEPALR 430
Query: 356 DLILEVVAANLCSSLEDVKTLIKHTLFYQLKSPEDQQTFLETTLSEIVASLLASK--GTM 413
+L +A+ + E + ++ TL+ S + LE +++A L +
Sbjct: 431 THVLATIASGFAHTREGLLEFLEATLYASQSS---ESGRLEAVTDDVLAYLERNDFIERS 487
Query: 414 LTMNEAGHLSLTSIAKAAVQAGLSHDVCLIIYSDLLH--NKLNFCLLNSLHMLFLVIPLE 471
+ TS A A Q G D L ++L H ++L +++ +++ + +
Sbjct: 488 GGSTGDDGGAFTSAAALAEQRG--EDETLEA-TNLGHTVSRLYLDPMSAAEIVYGLEDAD 544
Query: 472 YRIPSDGI--LLSRS-KVYDRYTKFHPQTL-------RVAEALGVTENLVALNVTGKLKD 521
R + G+ L+SR+ +Y+ Y + R AE LG + + ++
Sbjct: 545 ERPTALGLYQLISRTPDMYELYLRSGEDETFGELYYEREAELLG--------DAPSEFEE 596
Query: 522 EK-KALLCRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEEL 580
E+ + L +L D D+ +++ Y + L+ ++ + E+
Sbjct: 597 ERFEDWLAALKTGKLLEDWATEDDEERITDRYAVGPGDLRGKVDTAEWLLGAAESLAREI 656
Query: 581 PELWCYKQLLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAG 626
W + + + + L L+ + GV RAR+L +AG
Sbjct: 657 DSEWTVA--VREARARVEHGVGEELLELVSVGGVGRKRARRLYDAG 700
>gi|73670944|ref|YP_306959.1| ski2-like helicase [Methanosarcina barkeri str. Fusaro]
gi|121723325|sp|Q465R3.1|HELS_METBF RecName: Full=Putative ski2-type helicase
gi|72398106|gb|AAZ72379.1| helicase [Methanosarcina barkeri str. Fusaro]
Length = 729
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 118/392 (30%), Positives = 194/392 (49%), Gaps = 35/392 (8%)
Query: 10 AKAAEEFKFYLE-EYAGVK-----GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRI 63
A A+E+F+ + E G++ G Y L I + T EK L+ + + +
Sbjct: 78 ALASEKFRRFREFSELGIRVGISTGDYDLRDEGLGVNDIIVATSEKTDSLLRN--ETVWM 135
Query: 64 DEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGIT 123
EI ++V DE H+++ P RGP LE ++K+ + S QI A+SAT+GN + L+ ++E
Sbjct: 136 QEISVVVADEVHLIDSPDRGPTLEVTLAKLRKMNPSCQILALSATVGNADELAVWLEAEL 195
Query: 124 YVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVL 183
V RPT+ E V F+G + ++ S + L ++ + L
Sbjct: 196 VVSEWRPTELLEGVF--------FNGTFYCKDREKTVEQSTKDEAVNLALDTLKKDGQCL 247
Query: 184 IFCSSKIACSNLALRLQFDRFPGTKEYKKQEKED------LIEALKEENDGKLSTNLEEC 237
+F SS+ C + F + + K ED + + + E ++ STNL C
Sbjct: 248 VFESSRKNC------MAFAKKAASTVKKTLSAEDRNALAGIADEILENSETDTSTNLAVC 301
Query: 238 ILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRD-----SY 292
I G A+HHA LT R L+E+ + AG +++I T TLAAG+NLPA+RVIIR+ S
Sbjct: 302 IRSGTAFHHAGLTTPLRELVEDGFRAGRIKLISSTPTLAAGLNLPARRVIIRNYRRYSSE 361
Query: 293 VGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFL-RFSSMMNAGPEPISSHMDP 351
G I + YKQM GRAGR L GE++++ K+ ++F+ F + + A E I S +
Sbjct: 362 DGMQPIPVLEYKQMAGRAGRPRLDPYGEAVLVAKSYKEFVFLFENYIEANAEDIWSKLGT 421
Query: 352 P-TLVDLILEVVAANLCSSLEDVKTLIKHTLF 382
L +L ++ + +++ ++ T F
Sbjct: 422 ENALRTHVLSTISNGFARTYDELMDFLEATFF 453
>gi|296108824|ref|YP_003615773.1| DEAD/DEAH box helicase domain protein [methanocaldococcus infernus
ME]
gi|295433638|gb|ADG12809.1| DEAD/DEAH box helicase domain protein [Methanocaldococcus infernus
ME]
Length = 670
Score = 159 bits (403), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 125/400 (31%), Positives = 198/400 (49%), Gaps = 44/400 (11%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVK-----GQYPPTKRQLNKKSIYICTIEKGSKLIG 55
+ EKY+ K E+F GV+ G Y + L + I T EK L
Sbjct: 71 LASEKYEEFKKKYEKF--------GVRVALSIGDYDEDE-DLENYDLIITTAEKFDSLWR 121
Query: 56 SLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINAL 115
I ++ +I ++V+DE H++ + +RG LE +++K+ L +QI +SATIGN L
Sbjct: 122 HGI---KLSDISVVVVDEIHVIGDSERGGTLEVLLTKLKEL--DVQIIGLSATIGNPEEL 176
Query: 116 STFIEGITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHL 175
S ++ ++N RP + + + + V + DG+ D V +
Sbjct: 177 SEWLNAELLLDNWRPVELRKGIYREG-VIEYLDGE--------------VKECQDIVKEV 221
Query: 176 VQGNLMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEK--EDLIEALKEENDGKLSTN 233
V+ N V+IFC +K N AL L E +K E+ E+L+ + L
Sbjct: 222 VKDNGSVIIFCPTKKKAENRALSLDLSDLLKKSEKRKLEEISEELLSLFDPPTE--LCKK 279
Query: 234 LEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVII----R 289
L C+ G+A+HH+ LT R++IE+A+ L++IC T+TLA G+NLP +RVII R
Sbjct: 280 LASCVRKGIAFHHSGLTYEHRKIIEKAFRERILKVICSTTTLAFGLNLPCRRVIISELKR 339
Query: 290 DSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHM 349
+ G +I + +Q +GRAGR GL E GE I++ K +D+LR + PEPI S +
Sbjct: 340 YTRRGLTYIPIMEVQQCIGRAGRPGLDEYGEGILVAKDERDYLRALQCLTQKPEPIYSKL 399
Query: 350 -DPPTLVDLILEVVAANLCSSLEDVKTLIKHTLF-YQLKS 387
+ L IL ++A D++ IK+T + YQ K+
Sbjct: 400 SNDSVLRTQILGLIATRYVLDEYDLEEFIKNTFYAYQYKN 439
>gi|87045839|gb|ABD17736.1| helicase [Methanococcus voltae PS]
Length = 871
Score = 159 bits (403), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 138/428 (32%), Positives = 221/428 (51%), Gaps = 51/428 (11%)
Query: 10 AKAAEEFKFYLEEYA--GVK-----GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENR 62
A A E+F + E+Y G+K G Y +K L++ I I T EK + SL+++
Sbjct: 96 ALATEKFDEFREKYNKFGLKIGISIGDYD-SKENLSRYDIIIMTSEK----LDSLMRKKN 150
Query: 63 ---IDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFI 119
++++ +++IDE H+L + +RG LE V++K+ L IQI +SATIGN L+T++
Sbjct: 151 TTWLNDVSVVIIDEIHLLGDKERGGTLEIVLTKLKML--PIQIIGLSATIGNSEELATWL 208
Query: 120 EGITYVENSRPTK------HSE------YVTVDKRVFQSFDGKSLTEIYADNL-DYSLTG 166
V+ RP + H + Y D +V +GK+ NL +Y +
Sbjct: 209 NAKLVVDTWRPVELKKGLYHPDENKVDFYKIEDYKVVICENGKNKE---CKNLKNYGSSK 265
Query: 167 SG-PDAVLHLVQGNLMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKE- 224
S + +L ++ + L+FCSSK + A + TK K+ EKE+L E E
Sbjct: 266 SEISNLILDCIKSSGSCLVFCSSKRNAVSEAKKNDL-----TKYLKETEKEELAEISSEI 320
Query: 225 ----ENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVN 280
E K L EC+ GVA+HHA L +R+L+E+A+ +++ICCT TL+AG+N
Sbjct: 321 LNILEKPSKTCEQLSECVKKGVAFHHAGLAMKQRKLVEDAFRKRLIKVICCTPTLSAGLN 380
Query: 281 LPAQRVIIRDS--YVGRDFISL-NM-YKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSS 336
LP +R IIRD+ + G F ++ NM +Q +GRAGR GL GE I++ K +
Sbjct: 381 LPCRRAIIRDTKRFDGTGFSNIPNMEIQQCIGRAGRPGLDPYGEGIIVVKKSSEVGDNLY 440
Query: 337 MMNAGPEPISSHM-DPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQLKSPEDQQTFL 395
M+ PE I S++ + TL IL + + S +K +K+T FY ++ D + +
Sbjct: 441 MLRGKPEEIYSNISNKKTLRIFILGSIFSGEIVSFYQLKQFMKNT-FYAVQYG-DYEKIV 498
Query: 396 ETTLSEIV 403
E E++
Sbjct: 499 EDIKDEVI 506
>gi|159904947|ref|YP_001548609.1| DEAD/DEAH box helicase domain-containing protein [Methanococcus
maripaludis C6]
gi|159886440|gb|ABX01377.1| DEAD/DEAH box helicase domain protein [Methanococcus maripaludis
C6]
Length = 707
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 170/640 (26%), Positives = 299/640 (46%), Gaps = 74/640 (11%)
Query: 14 EEFKFYLEEYA---GVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIV 70
EEFK E+Y G+ +K LNK + I T EK LI I + + ++ +V
Sbjct: 83 EEFKEKYEKYGLKIGISIGDFDSKEDLNKYDLIITTSEKLDSLIRHKI--DWLKDVSCVV 140
Query: 71 IDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVENSRP 130
+DE H++ + RG LE V++ + L+ +QI +SAT+GN L+ ++ +++ RP
Sbjct: 141 VDEIHLIGDGDRGATLEVVLTILKSLE--LQIIGLSATVGNPGELADWLNAKLIIDSWRP 198
Query: 131 TKHSEYVTVDKRV-FQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSK 189
+ + + + + + + K + + ++L+ + V+ + LIFCSSK
Sbjct: 199 IELRKATFFENVIEYTNSEEKKVENEHKNSLN--------NLVIDTAKEEGSCLIFCSSK 250
Query: 190 IACSNLALRLQFDRF--PGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHA 247
A + ++ P E + EDL+E+ +++GK L +C+ G+A+HHA
Sbjct: 251 RNAVGEAKKHDVRKYLHPLEIEKLNEVAEDLLES---DSEGKTVKTLSDCVRKGIAFHHA 307
Query: 248 DLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRD----SYVGRDFISLNMY 303
LT +R+++E AY +++ICCT TL+AG+NLP +R IIRD S G FI +
Sbjct: 308 GLTTKQRKIVETAYKNRIIKVICCTPTLSAGLNLPCRRAIIRDVKRFSDRGMKFIPVMEI 367
Query: 304 KQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHM-DPPTLVDLILEVV 362
+Q +GRAGR GL G+ I++ K D +++N PE I S + + +L +L ++
Sbjct: 368 QQCIGRAGRPGLDPYGDGIIVLKKKGDVTEALNLLNGDPEHIYSGIANYKSLEKHVLGLI 427
Query: 363 AANLCSSLEDVKTLIKHTLF-YQLKSPEDQQTF-LETTLSEIVASLLASKGTMLTMNEAG 420
A+++ + ++ +K+T + YQ + F ++ T+ EI+ +K E
Sbjct: 428 ASDITRTKTELFKFLKNTFYAYQY-----EDFFKIKRTVEEILFDFKTAK---FIRPENE 479
Query: 421 HLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEYRIPSDGIL 480
L +T++ GL I S H +LN L LE D IL
Sbjct: 480 ILEVTAL-------GLRVSELYISPSSARH------ILNGLS------NLEDYSFEDHIL 520
Query: 481 LSRSKVYDRYTKF----HPQTLRVA-EALGVTENLVALNVTGKLKDEKKALLCRFFHACI 535
L+ S ++ K + +R E+LG + +L D+ R F A I
Sbjct: 521 LTLSGTHEMKPKLRMPDNDSDIRYELESLGYESD-------DELIDD--FFYSRLFKAWI 571
Query: 536 LYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELWCYKQLLTDLPQ 595
+ + + H++ A GI L+ +N Y A ++ R L + W +++
Sbjct: 572 -SEKSDEEIHEEFAVEPGILRYKLEQ-MNWMMYSAKELLRISGNLKDYW---NEFSNIDV 626
Query: 596 TLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIAR 635
L Y + L L+ + G+ +AR+L + G + E I +
Sbjct: 627 RLKYGASVELVELLKIKGIGRVKARKLYDVGLKTREDIKK 666
>gi|403302148|ref|XP_003941725.1| PREDICTED: DNA polymerase theta-like, partial [Saimiri boliviensis
boliviensis]
Length = 2294
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 133/464 (28%), Positives = 220/464 (47%), Gaps = 56/464 (12%)
Query: 96 LKKSIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSF-----DGK 150
L ++QI MSAT+ N+ +++++ Y + RP E V V ++ S + +
Sbjct: 8 LSNAVQIVGMSATLPNLELVASWLNAELYHTDFRPVPLLELVKVGNSIYDSSMKLVREFE 67
Query: 151 SLTEIYADNLDYSLTGSGPDAVLHL----VQGNLMVLIFCSSKIACSNLA---------L 197
L + D D V+ L + N VL+FC SK C LA L
Sbjct: 68 PLLPVKGDE----------DHVVSLCYETICDNHSVLLFCPSKKWCEKLADIVAREFYNL 117
Query: 198 RLQFDRFPGTKEYKK--QEKEDLIEALKEEN--DGKLSTNLEECILYGVAYHHADLTAGE 253
Q + + E+ QE++DL+E + + L + L++ + +GVA+HHA LT E
Sbjct: 118 HHQAEGLVISSEFPPVIQEQKDLLEVMDQLRRLPSGLDSVLQKTVPWGVAFHHAGLTFEE 177
Query: 254 RRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGRDFISLNMYKQMVGRAGRT 313
R +IE A+ G ++++ TSTL++GVNLPA+RVIIR G + + YKQMVGRAGR
Sbjct: 178 RDIIEGAFRQGLIRVLAATSTLSSGVNLPARRVIIRTPIFGGRPLDILTYKQMVGRAGRK 237
Query: 314 GLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMD-------PPTLVDLILEVVAANL 366
G+ GESI++CK + + +++ +P+ S + +++ ILE++ +
Sbjct: 238 GVDTIGESILICKNSEKS-KGIALLQGSLKPVCSCLQRREGEEVTASMIRAILEIIVGGV 296
Query: 367 CSSLEDVKTLIKHTLFYQLKSPEDQQTFLETTLSEIVASLLAS-----KGTMLTMNEAGH 421
S+ +D+ T T F E +Q + S V ++ A + + + EA
Sbjct: 297 ASTSQDMHTYADCT-FLAASMKEGKQEIQKNQESAQVEAIEACVMWLLENEFIQITEASD 355
Query: 422 LS------LTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEYRIP 475
+ T + A + + LS L I++DL F L N LH+++LV P +
Sbjct: 356 GTEGKVYHPTHLGSATLSSSLSPADTLDIFADLQRAMKGFVLENDLHIVYLVTP----VF 411
Query: 476 SDGILLSRSKVYDRYTKFHPQTLRVAEALGVTENLVALNVTGKL 519
D + + + + K RVAE +GV E +A V GK+
Sbjct: 412 EDWTTIDWYRFFCLWEKLPTSMKRVAELVGVEEGFLARCVKGKV 455
>gi|406866261|gb|EKD19301.1| DEAD/DEAH box helicase [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 803
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 121/445 (27%), Positives = 215/445 (48%), Gaps = 31/445 (6%)
Query: 213 QEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCT 272
+ + +L+ L+ N G L LE+ + GVA+HHA LT ER LI A+ G +++I T
Sbjct: 318 ERRRELLSELRSTNTG-LDQVLEKTVPVGVAFHHAGLTTEERDLIATAFDEGVIKVIVAT 376
Query: 273 STLAAGVNLPAQRVIIRDSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFL 332
+LAAG+NLPA+RVI+ + +G D + +M +QM GRAGR G E GE+ + C+ D
Sbjct: 377 CSLAAGINLPARRVILHGARMGADLVGPSMLRQMRGRAGRKGKDEIGETYLCCQK-SDLE 435
Query: 333 RFSSMMNAGPEPISSHM--DPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQLKSPED 390
+ ++ A + S + D + +LE++A N+ +S E V ++ TL Y ++
Sbjct: 436 DVAELIEAELPSVESCLLPDKKGIKRALLEIIATNMATSDESVDDYMRKTLLYHSIDHKE 495
Query: 391 QQTFLETTLSEIVASLLASKGTMLTMNEAGHLSLTSIAKAAVQAGLSHDVCLIIYSDLLH 450
T +ETT+ E+ + +L ++G+ + + +A V + L+ + L ++ +L
Sbjct: 496 LATLVETTIKEL------EEDQLLHRTDSGY-EASLLGQAIVSSSLTPEDGLFVHKELQK 548
Query: 451 NKLNFCLLNSLHMLFLVIPLEYRIPSDGILLSRSKVYDRYTKFHPQTLRVAEALGVTENL 510
F + +H+L+ P++ S ++ K F +R E +G+ ++
Sbjct: 549 ALQAFVMDGEMHVLYSFTPVQSAQTS----INWQKFRKEMEFFDESNMRALEFVGLKPSI 604
Query: 511 V-ALNVT------GKLKD------EKKALLCRFFHACILYDVLNFDNHQKVAKMYGIQNS 557
+ + +T G +K+ + + RF+ A L D+ N VA+ Y I
Sbjct: 605 INKMRLTGTRAQGGTMKESTPQEIDTARIYRRFYTALQLRDLCNEMPIHAVARKYDIARG 664
Query: 558 HLQNFLNVTSYFASKVYRFCEELPELWCYKQLLTD-LPQTLMYCRAPNLRALMDLPGVKI 616
+QN FA+ + +FCE + W ++ D L P+L AL + VK
Sbjct: 665 MVQNLAQTCHGFAAGMVKFCERMK--WGALAVVLDHFSDRLRAGAKPDLLALAQVTYVKS 722
Query: 617 GRARQLLNAGYSSLELIARADAKEM 641
AR G+ ++ +A AD K++
Sbjct: 723 RTARVFWENGFRTVAALAAADVKDI 747
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 61/109 (55%), Gaps = 1/109 (0%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V EK + L K E G G K + I +CTIEK + LI + ++E
Sbjct: 195 LVQEKLKWLRKVVEGIPKNTIRVVGFFGG-SKAKSTWHDMEIAVCTIEKANSLINAALEE 253
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATI 109
N + +G++V+DE HM+++ RG ILE + +K+L L + +Q+ MSAT+
Sbjct: 254 NTLGNLGVVVMDELHMIDDEGRGYILELMATKLLCLDQHVQLIGMSATL 302
>gi|448302416|ref|ZP_21492398.1| ski2-like helicase [Natronorubrum tibetense GA33]
gi|445581645|gb|ELY35997.1| ski2-like helicase [Natronorubrum tibetense GA33]
Length = 790
Score = 158 bits (400), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 116/392 (29%), Positives = 198/392 (50%), Gaps = 45/392 (11%)
Query: 15 EFKFYLEEYAGVK-----GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE--NRIDEIG 67
EF+ Y E GV G Y T L K I + T EK + SL++ + + ++
Sbjct: 87 EFEAY--ERFGVTTGVTTGNYESTSEWLATKDIIVATSEK----VDSLVRNGADWLSDLT 140
Query: 68 LIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVEN 127
+V DE H++++ RGP LE ++K+ L ++Q A+SAT+GN + ++ +++ +
Sbjct: 141 CVVSDEVHLIDDRNRGPTLEVTLAKLRRLNPAMQTVALSATVGNADEIADWLDAALVDTD 200
Query: 128 SRPTKHSEYVTVDKRVFQ------SFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLM 181
RP +D R+ +FD S E+ + + + V ++Q
Sbjct: 201 WRP--------IDLRMGVHYGNALNFDDGSTREVPVEGSEKQESA----LVRDILQEGGS 248
Query: 182 VLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKE---DLIEALKEENDGKLSTNLEECI 238
L+F +S+ A RL ++E E+E DL E ++E++D + S +L +C+
Sbjct: 249 SLVFVNSRRNAEAAASRLGQ---VSSRELDGDEREALVDLAEEIREDSDTETSKDLADCV 305
Query: 239 LYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRD------SY 292
G A+HHA L++ +R L+E+A+ L++I T TLAAGVN PA+RVI+RD S
Sbjct: 306 ERGAAFHHAGLSSTQRTLVEDAFRDRLLKVISATPTLAAGVNTPARRVIVRDWRRFDPSA 365
Query: 293 VGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLR-FSSMMNAGPEPISSHMDP 351
G + + QM+GRAGR GL GE+++L K+ ++ F + A PE + S +
Sbjct: 366 GGMSPLDVLEVHQMMGRAGRPGLDPYGEAVLLAKSHEESEELFDRYIWADPEAVRSKLAA 425
Query: 352 -PTLVDLILEVVAANLCSSLEDVKTLIKHTLF 382
P L +L +A+ + E + ++ TL+
Sbjct: 426 EPALRTHVLATIASGFARTREGLLEFLEATLY 457
>gi|448381170|ref|ZP_21561437.1| ski2-like helicase [Haloterrigena thermotolerans DSM 11522]
gi|445663522|gb|ELZ16270.1| ski2-like helicase [Haloterrigena thermotolerans DSM 11522]
Length = 790
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 116/391 (29%), Positives = 198/391 (50%), Gaps = 31/391 (7%)
Query: 14 EEFKFYLEEYA---GVK-GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE--NRIDEIG 67
EEF+ Y EE+ GV G Y T L K I + T EK + SL++ + + E+
Sbjct: 86 EEFEAY-EEFGVTVGVTTGNYESTSDWLATKDIVVATSEK----VDSLVRNGADWLSELT 140
Query: 68 LIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVEN 127
+V DE H++++ RGP LE ++K+ L +Q A+SAT+GN + ++ +++ +
Sbjct: 141 CVVSDEVHLIDDRNRGPTLEVTLAKLRKLNPGMQQVALSATVGNADEIADWLDAALIDTD 200
Query: 128 SRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDA---VLHLVQGNLMVLI 184
RP +D R+ + G +L + + GS V +V+ L+
Sbjct: 201 WRP--------IDLRMGVHY-GNALNFDDGSTREVPVQGSEKQEAALVRDIVREGGSSLV 251
Query: 185 FCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAY 244
F +S+ A RL P ++ E +L + +++++D + S +L +C+ G A+
Sbjct: 252 FVNSRRNAEAAAGRLGGVVKPELTGDERAELAELADEIRDDSDTETSKDLADCVERGAAF 311
Query: 245 HHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRD------SYVGRDFI 298
HHA L++ +R ++E+A+ L++I T TLAAGVN PA+RVI+RD S G +
Sbjct: 312 HHAGLSSTQRSIVEDAFRDRLLKVISATPTLAAGVNTPARRVIVRDWRRFDPSAGGMSPL 371
Query: 299 SLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLR-FSSMMNAGPEPISSHMDP-PTLVD 356
+ QM+GRAGR GL GE+++L K+ + F + A PEP+ S + P L
Sbjct: 372 DVLEVHQMMGRAGRPGLDPYGEAVLLAKSHDESEELFDRYIWADPEPVRSKLAAEPALRT 431
Query: 357 LILEVVAANLCSSLEDVKTLIKHTLFYQLKS 387
+L +A+ + E + ++ TL+ S
Sbjct: 432 HVLATIASGFARTREGLLEFLEATLYASQSS 462
>gi|302414602|ref|XP_003005133.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102]
gi|261356202|gb|EEY18630.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102]
Length = 866
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 152/593 (25%), Positives = 263/593 (44%), Gaps = 56/593 (9%)
Query: 93 VLYLKKSIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSFDGKSL 152
V ++KS+Q+ MSAT+ NI LST+++G +Y RP E++ + V+ + L
Sbjct: 252 VCTIEKSMQVVGMSATLSNIRLLSTWLDGHSYETKYRPVPVEEHLVYESHVYPAATTSEL 311
Query: 153 ---------------TEIYA-DNLDYSLTGSGPDAVLHLV--------QGNLMVLIFCSS 188
+E A ++ S+ D V++ V + L+F S
Sbjct: 312 LKTANQLKNVSQPTQSEAMAIRRIEPSVHRELKDPVVNSVVALAAETARAGYGALVFAGS 371
Query: 189 KIACSNLALRLQFDRFPGTKEYKK---QEKEDLIEALKEENDGKLSTNLEECILYGVAYH 245
+ AC A +L P +E + ++ L+ L+ + G L LEE I GVA+H
Sbjct: 372 RGACETDA-KLIARVLPQQEEVEPTLFDKRVGLLAELRSLSTG-LDAALEETIPSGVAFH 429
Query: 246 HADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGRDFISLNMYKQ 305
LT ER LI AY G L++ T +LAAG+NLPA+RVI+ ++ +GRDF+ +M +Q
Sbjct: 430 R--LTTEERELIANAYDMGVLKVCVATCSLAAGINLPARRVILHNARMGRDFVGPSMLRQ 487
Query: 306 MVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHM--DPPTLVDLILEVVA 363
M GRAGR G E GE+ + C+ D + +M++ ++S + D + +LEV+A
Sbjct: 488 MRGRAGRKGKDEVGETYLCCRK-DDLEQVVDLMHSEMPQLTSGLNSDKQRIQRALLEVIA 546
Query: 364 ANLCSSLEDVKTLIKHTLFYQLKSPEDQQTFLETTLSEIVASLLASKGTMLTMNEAGHLS 423
L +S + + TL + ++++L +++ + ++
Sbjct: 547 IRLATSRDSIDDYAAKTLLACTGDLALVRKCVQSSLDNLLSL------NFVEVDGLDGFR 600
Query: 424 LTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEYRIPSDGILLSR 483
T + KA V + L D I+ +L F + +H+L++ P++ G ++
Sbjct: 601 PTQLGKAIVASALDPDDGTFIHKELQRALKAFVMDGEMHILYMFTPVQ----DYGTNINW 656
Query: 484 SKVYDRYTKFHPQTLRVAEALGVTENLVALNVTGKLKDEKKA-------LLCRFFHACIL 536
+ RV LG+ ++ G + E A + RF+ A L
Sbjct: 657 QVFRNEMEALDDSGHRVLGFLGLKRAVINRLAQGGVLKESTAEEQDVIRVHRRFYMALQL 716
Query: 537 YDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELWCYKQLLTD-LPQ 595
D+ N VA+ Y + +Q + FA+ + +FCE++ W D
Sbjct: 717 RDLCNEMPIHVVARKYDVHRGAVQTLSQTCTGFAAGMIKFCEQMG--WGIMSAALDHFSD 774
Query: 596 TLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIARADAKEMV--AKIR 646
L +L AL + +K AR +GY S+ +A AD +E+ +K+R
Sbjct: 775 RLRAGARADLLALAKITFIKSRTARIFWESGYRSIAAVANADPRELAQPSKVR 827
>gi|126465121|ref|YP_001040230.1| DEAD/DEAH box helicase [Staphylothermus marinus F1]
gi|126013944|gb|ABN69322.1| DEAD/DEAH box helicase domain protein [Staphylothermus marinus F1]
Length = 716
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 113/366 (30%), Positives = 196/366 (53%), Gaps = 27/366 (7%)
Query: 28 GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILE 87
G Y L + +I I T E+ L+ ++ ++ IG++VIDEFHM+ +P+RGPILE
Sbjct: 106 GDYESPAEYLGRYNIVIATYERFDSLL--RLKPKWLNRIGVVVIDEFHMIGDPERGPILE 163
Query: 88 CVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKR----V 143
+++K+L QI +SATIGN + L+ +I + RP + E V DK+ V
Sbjct: 164 MIIAKML--SSQAQIIGLSATIGNPDVLAGWINAELVDDPYRPVELVEGV-YDKKNHVIV 220
Query: 144 FQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRLQFDR 203
F+ DG+ + + + + G+ + L + + VL+F ++ A +L
Sbjct: 221 FR--DGRR------EKIIHRIGGAALNISLQSISSGIQVLVFVHNRRKAEEWAFKLSEHM 272
Query: 204 FPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLA 263
K + +++E LKE LE I GVA+HHA L++ RR++E+ +
Sbjct: 273 GLFKHLIDKNKLSEILEELKESPSRLEREKLEYLISRGVAFHHAGLSSVARRVVEKGFRE 332
Query: 264 GTLQIICCTSTLAAGVNLPAQRVII---RDSYVGRDFISLNM--YKQMVGRAGRTGLQES 318
++ + T TLAAGVNLPA+RV++ R S + R +++ + YKQM GRAGR
Sbjct: 333 RIIRAVFATPTLAAGVNLPARRVLVSIKRYSPMRRQTVNIAVYEYKQMAGRAGRPTYDPY 392
Query: 319 GESIML-CKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDL-ILEVVAANLCSSLEDVKTL 376
GE+I+ ++ + L+F ++ EPI+S ++ + + +L ++A+ ++LE++ +
Sbjct: 393 GEAIIYDASSLSEGLKF---IHGKLEPITSKLNNERSLRIHVLALIASKDANTLEEIINV 449
Query: 377 IKHTLF 382
K+TLF
Sbjct: 450 FKNTLF 455
>gi|389861672|ref|YP_006363912.1| DEAD/DEAH box helicase [Thermogladius cellulolyticus 1633]
gi|388526576|gb|AFK51774.1| DEAD/DEAH box helicase domain protein [Thermogladius cellulolyticus
1633]
Length = 712
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 172/651 (26%), Positives = 284/651 (43%), Gaps = 69/651 (10%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVK-GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQ 59
+ +EKY KA EE F + G+ G Y L K + I T E+ L+ I+
Sbjct: 82 LANEKYDEF-KALEELGFKV----GISTGDYDSPAEDLEDKDVVIATYERFDSLL--RIK 134
Query: 60 ENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFI 119
+ ++ +V+DE HM+N+P+RGP++E +++++ L S ++ +SATIGN L+ ++
Sbjct: 135 PLWLRKVSTVVVDELHMINDPERGPVVEMIIARLRSL--SARVIGLSATIGNPRELAEWL 192
Query: 120 EGITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGN 179
RP K E +D +S + +YAD + D +L+LV +
Sbjct: 193 SAKLVDVAWRPVKLRE---------GYYDKRSGSIVYADGGSEDVEDEFDDKILNLVSQS 243
Query: 180 L----MVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLE 235
L VL+F ++ LA G + K D++E L E L
Sbjct: 244 LSKGIQVLVFVHNRRRVEELAETTAA--LIGASKSKGL-TSDVVERLSESPSRMEREKLL 300
Query: 236 ECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGR 295
+ GV YHHA L+ RR +EEA+ A L + T TLAAGVNLPA+RVI+ S
Sbjct: 301 ALMEKGVGYHHAGLSIQARRAVEEAFRARALSAVFATPTLAAGVNLPARRVIV--SIKRY 358
Query: 296 DFISLNM-------YKQMVGRAGRTGLQESGESIML-CKTMQDFLRFSSMMNAGPEPISS 347
D S M YKQM GRAGR E GE+I+ K+ ++ L++ +N+GPE I S
Sbjct: 359 DPTSSKMVNIPVFEYKQMAGRAGRPRYDEIGEAIIADAKSEKEALKY---INSGPENIVS 415
Query: 348 HMDPPTLVDL-ILEVVAANLCSSLEDVKTLIKHTLFYQLKSPEDQQTFLETTLSEIVASL 406
+ + + L ++A L+ V + TL + Q +E +++ ++
Sbjct: 416 KVSSERSLRIHTLSLIAGGDAGDLKKVMDIYSQTLGAK------QYGGIEVFSNQVEKAI 469
Query: 407 LASKGTMLTMNEAGHLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFL 466
A + G L T + K ++ L ++ + + +F L+ LH
Sbjct: 470 RALVEMRMVEELDGGLKATRLGKLT---SFTYLDPLTVHYCIKYRPEDFDELDVLH---- 522
Query: 467 VIPLEYRIPSDGILLSRSKVYDRYTKFHPQTL-RVAEALGVTENLVALNVTGKLKD-EKK 524
L++ S Y R + P ++ V E + L G++ E
Sbjct: 523 -------------LITTSVDYVRSRPYIPDSVVEVFEDEALHSGLARRVGLGRMSSVEID 569
Query: 525 ALLCRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELW 584
L+ + HA +L D +N + ++A Y I L ++ A + + E L
Sbjct: 570 NLITGYVHALVLRDWINEVDEDRIASKYEIGPGDLFTMRETVAWIAGSLAK-IERLLGNV 628
Query: 585 CYKQLLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIAR 635
+ L L + Y + L+ L G+ RAR L+N G +L+ +A+
Sbjct: 629 TFSTRLNRLSVRVQYGVKEDALELIRLRGIGRVRARILINHGIRTLQDLAK 679
>gi|374633395|ref|ZP_09705760.1| superfamily II helicase [Metallosphaera yellowstonensis MK1]
gi|373523183|gb|EHP68103.1| superfamily II helicase [Metallosphaera yellowstonensis MK1]
Length = 703
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 174/656 (26%), Positives = 284/656 (43%), Gaps = 93/656 (14%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVK-----GQYPPTKRQLNKKSIYICTIEKGSKLIG 55
+ EKY EFK + E G+K G+Y L + + T EK +
Sbjct: 83 LTSEKYH-------EFKAW--ESLGIKVGMTSGEYDTDDAWLRNYQLIVTTYEK----LD 129
Query: 56 SLIQE--NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNIN 113
SL + + + E V+DEFH +N+ +RGP++E V K K + +SATI N +
Sbjct: 130 SLWRHGPSWLFETDYFVLDEFHYINDGERGPVVESVAVKA----KRRNLLVLSATISNHS 185
Query: 114 ALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVL 173
++ ++E N RP E V V R +AD Y L G+ DA+L
Sbjct: 186 EIAKWLEAEAVTTNWRPVPLREGVLVPDR-------GGFVVSFADGSSYKLRGN--DAIL 236
Query: 174 ----HLVQGNLMVLIFCSSKIACSNLALRL-QFDRFPGTKEYKKQEKEDLIEALKEENDG 228
+V VL+F +S+ A ++ + D E K++E EDLI L+E +D
Sbjct: 237 AFTRKVVDEGGQVLLFRNSRRMAETTARKVAELD-----LEVKRKEIEDLIAKLEEVDDA 291
Query: 229 KLSTN--LEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRV 286
+ L E + GVA+HHA L+ G R +IE+ + +++I T TLAAGVNLPA+ V
Sbjct: 292 GSNEKEALRELLERGVAFHHAGLSRGLREVIEDGFRKRIIKVITATPTLAAGVNLPARAV 351
Query: 287 IIRDSY------VG-RDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLR-FSSMM 338
II D Y +G ++ IS+ YKQM GRAGR G GE++++ + +D R F +
Sbjct: 352 IIGDIYRFNRKILGFQEEISIMEYKQMSGRAGRPGYDSEGEAVIVVRNRRDAERVFKRYI 411
Query: 339 NAGPEPISSHM-DPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQLKSPEDQQTFLET 397
+ PEPI S + + P +L +++ S++E ++ L + TL S E +L++
Sbjct: 412 LSPPEPIQSRLGNEPAFYSFLLGLISEG-ESTVEQIRELARQTLL----SRELVDRYLDS 466
Query: 398 TLSEIVASLLASKGTMLTMNEAGHLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCL 457
+ + + + ++E L LT + + ++ ++ L N+ C
Sbjct: 467 GIPWL------EENGFIELDE--KLFLTKLGRRVADLYINPFTAQVVKDVLRKNEAVECN 518
Query: 458 LNSLHMLFLVIPLEYRIPSDGILLSRSKVYDRYTKFHPQTLRVAEALGVTENLVALNVTG 517
L LH+L DG + SK E + EN+
Sbjct: 519 LAYLHLLAW--------SPDGPFVGVSK---------------GEEDELIENVSCPPFLD 555
Query: 518 KLKDEKK--ALLCRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYR 575
+ +DE + A IL D + + YGI + L++ + + Y
Sbjct: 556 EPEDEDDFYKYVSALKIASILNDWIEEIEEDVILGRYGIGSGDLRSLVETMDWLTYSAYN 615
Query: 576 FCEELPELWCYKQLLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLE 631
+ L L + +L L + +L ++ +PGV R R L G + E
Sbjct: 616 VAQVLG-LEEHADVLRRLNARVEDGVKEDLLEIVRVPGVGRKRGRVLFQNGLTKPE 670
>gi|330508264|ref|YP_004384692.1| putative Ski2-type helicase [Methanosaeta concilii GP6]
gi|328929072|gb|AEB68874.1| putative Ski2-type helicase [Methanosaeta concilii GP6]
Length = 769
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 165/679 (24%), Positives = 289/679 (42%), Gaps = 58/679 (8%)
Query: 28 GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILE 87
G + +L + I I T EK L+ + + I ++ ++VIDE H+LN+ RGP LE
Sbjct: 105 GDFDKKDERLGRNQIIIATSEKADSLMRN--GASWIRDLAVLVIDEIHLLNDVGRGPTLE 162
Query: 88 CVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSF 147
++K+ +QI +SAT+ N L+ +++ + RP E V R+ S
Sbjct: 163 MTITKLRRSNSGLQIIGLSATVANSRELADWLDAELVSSDWRPIALKEGVICKGRLVFSD 222
Query: 148 DGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRLQFDRFPGT 207
+ ++L + D S+ V + + +LIF +S+ A++L P
Sbjct: 223 EERALEAKKDEKKDESIA-----LVRDTLSQDAQILIFENSRKNAEAAAIKLSNLIPPDP 277
Query: 208 KEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQ 267
K E L E++ + + L C+ G+A+HHA L +RRL+E+ + ++
Sbjct: 278 K------AETLSESILATGESETCHRLASCVSRGIAFHHAGLLPDQRRLVEQGFRENRIK 331
Query: 268 IICCTSTLAAGVNLPAQRVIIRDSYVGRDF------ISLNMYKQMVGRAGRTGLQESGES 321
+I T TLAAG+NLPA+RV+I+ SY ++ I + Y+QM GRAGR GL GES
Sbjct: 332 VIASTPTLAAGLNLPARRVLIK-SYRRYEYGSGMVPIPVIEYRQMAGRAGRPGLDPYGES 390
Query: 322 IMLCKTMQDFLRFSS-MMNAGPEPISSHM-DPPTLVDLILEVVAANLCSSLEDVKTLIKH 379
++ K + ++ PE I S + L IL + A + ++K I
Sbjct: 391 FLMAKDDSEMRNLKEHYIDGSPEEIWSKLASESALRTHILSTITAGFARTEGELKEFIAT 450
Query: 380 TLFYQLKSPEDQQTFLETTLSEIVASLLASKGTMLTMNEAGHLSLTSIAKAAVQAGLSHD 439
T + + P L+ L +++A L S M+ + G L+ T +
Sbjct: 451 TFYAYQQDP----WHLDAALEKVLAFL--SDNGMIVDSPEGDLTPTKLGS---------- 494
Query: 440 VCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEYRIPSDGILLSRSKVYD----RYTKFHP 495
L +KL L+++ ML + R +G + K D P
Sbjct: 495 ---------LVSKLYIDPLSAVIMLENLAEKGGREEKNGKEATVRKPTDLSLIHLITMTP 545
Query: 496 QT--LRVAEALGVTENLVALNVTGKLKDEKKALLCRFFH-ACILYDVLNFDNHQKVAKMY 552
L + A G E + LN + +E L R + +L+D + + ++ Y
Sbjct: 546 DMALLYIQSADGWVEEFIDLNQSELFNEENYDYLLREAKTSSMLFDWIGEVKEELISDRY 605
Query: 553 GIQNSHLQNFLNVTSYFASKVYRFCEELPELWCYKQLLTDLPQTLMYCRAPNLRALMDLP 612
I ++ + + + L Y+ L L Y +L +L+DL
Sbjct: 606 RIGPGDIRRSAETAEWLMHSLAELSKHLDLGITYRA--EQLSVRLHYGAGQDLLSLLDLK 663
Query: 613 GVKIGRARQLLNAGYSSLELIARADAKEMVAKIRHLPLRSARNLISAAKLHFITKMDKVE 672
GV RAR+L +G ++ E + D E+ + P + + L+ A+ + M E
Sbjct: 664 GVGRVRARKLHQSGITNREKLKSTDPVEIARLLG--PKIAEKVLLQLAREERMDGMRSDE 721
Query: 673 AMKNLIQNLQKNYDNIVHN 691
A++ ++ ++ + I N
Sbjct: 722 AIEGYGKDGEEEVNGITKN 740
>gi|284166992|ref|YP_003405271.1| DEAD/DEAH box helicase [Haloterrigena turkmenica DSM 5511]
gi|284016647|gb|ADB62598.1| DEAD/DEAH box helicase domain protein [Haloterrigena turkmenica DSM
5511]
Length = 791
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 114/388 (29%), Positives = 196/388 (50%), Gaps = 25/388 (6%)
Query: 14 EEFKFYLEEYA---GVK-GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE--NRIDEIG 67
EEF+ Y EE+ GV G Y T L K I + T EK + SL++ + + E+
Sbjct: 86 EEFEAY-EEFGVTTGVTTGNYESTDDWLATKDIIVATSEK----VDSLVRNGADWLSELT 140
Query: 68 LIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVEN 127
+V DE H++++ RGP LE ++K+ L +Q+ A+SAT+GN + ++ +++ +
Sbjct: 141 CVVSDEVHLIDDRNRGPTLEVTLAKLRRLNPGMQVVALSATVGNADEIADWLDASLVDTD 200
Query: 128 SRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCS 187
RP V + +FD S E+ + + V +++ L+F +
Sbjct: 201 WRPIDLQMGVHYGNAL--NFDDGSTREVPVEGSEKQEAA----LVRDILREGGSSLVFVN 254
Query: 188 SKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHA 247
S+ A RL E ++ E +L + +++++D + S +L +C+ G A+HHA
Sbjct: 255 SRRNAEGAAKRLGQVSSREITEDERAELAELADDIRDDSDTETSADLADCVERGAAFHHA 314
Query: 248 DLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRD------SYVGRDFISLN 301
L++ +R L+E+A+ L++I T TLAAGVN PA+RVI+RD S G + +
Sbjct: 315 GLSSTQRSLVEDAFRDRLLKVISATPTLAAGVNTPARRVIVRDWRRFDPSAGGMAPLDVL 374
Query: 302 MYKQMVGRAGRTGLQESGESIMLCKTMQDFLR-FSSMMNAGPEPISSHMDP-PTLVDLIL 359
QM+GRAGR GL GE+++L K+ + F + A PEP+ S + P L +L
Sbjct: 375 EVHQMMGRAGRPGLDPYGEAVLLAKSHDESEELFDRYIWADPEPVRSKLAAEPALRTHVL 434
Query: 360 EVVAANLCSSLEDVKTLIKHTLFYQLKS 387
+A+ + + ++ TL+ S
Sbjct: 435 ATIASGFARTRGGLLEFLEATLYASQSS 462
>gi|297526610|ref|YP_003668634.1| DEAD/DEAH box helicase domain-containing protein [Staphylothermus
hellenicus DSM 12710]
gi|297255526|gb|ADI31735.1| DEAD/DEAH box helicase domain protein [Staphylothermus hellenicus
DSM 12710]
Length = 722
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 107/366 (29%), Positives = 192/366 (52%), Gaps = 27/366 (7%)
Query: 28 GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILE 87
G Y L + +I + T E+ L+ ++ ++ IG+IV+DEFHM+ +P+RGPILE
Sbjct: 113 GDYESPAEYLGRYNIVVATYERFDSLL--RLKPRWLNRIGVIVVDEFHMIGDPERGPILE 170
Query: 88 CVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSF 147
+++++L +QI +SATIGN + L+ ++ + RP + E V +
Sbjct: 171 MIIARML--SSRVQIIGLSATIGNPDVLAEWVNAELVDDPYRPVELVEGV---------Y 219
Query: 148 DGKSLTEIYADN----LDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRLQFDR 203
D K+ ++ D + + + G+ + L + + VL+F ++ A +L
Sbjct: 220 DKKNHVIVFEDGRRKKIIHRIGGAALNISLQSISSGIQVLVFVHNRRKTEEWAFKLSEHM 279
Query: 204 FPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLA 263
K + ++E LKE LE I GVA+HHA L++ RR++E+ +
Sbjct: 280 GLFKHLIDKNKLSQILEELKESPSRLEREKLEYLISRGVAFHHAGLSSVARRVVEKGFRE 339
Query: 264 GTLQIICCTSTLAAGVNLPAQRVII---RDSYVGRDFISLNM--YKQMVGRAGRTGLQES 318
++ + T TLAAGVNLPA+RV++ R S V R +++ + YKQM GRAGR
Sbjct: 340 RIIRAVFATPTLAAGVNLPARRVLVSIKRYSPVRRRTVNIAVYEYKQMAGRAGRPTYDPY 399
Query: 319 GESIML-CKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDL-ILEVVAANLCSSLEDVKTL 376
GE+I+ ++ + +RF + EPI+S ++ + + +L ++A+ ++L+++ +
Sbjct: 400 GEAIIYDASSLSEGMRF---IRGRLEPITSKLNNERSLRIHVLALIASRHANTLDEIINV 456
Query: 377 IKHTLF 382
K+TLF
Sbjct: 457 FKNTLF 462
>gi|448304077|ref|ZP_21494022.1| ski2-like helicase [Natronorubrum sulfidifaciens JCM 14089]
gi|445592164|gb|ELY46356.1| ski2-like helicase [Natronorubrum sulfidifaciens JCM 14089]
Length = 784
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 162/641 (25%), Positives = 290/641 (45%), Gaps = 51/641 (7%)
Query: 15 EFKFYLEEYA---GVK-GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE--NRIDEIGL 68
EF+ Y EE+ GV G Y T L K I + T EK + SL++ + + ++
Sbjct: 87 EFEAY-EEFGVTVGVTTGNYESTSEWLATKDIIVATSEK----VDSLVRNGADWLSDLTC 141
Query: 69 IVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVENS 128
+V DE H++++ RGP LE ++K+ L +Q+ A+SAT+GN + ++ +++ +
Sbjct: 142 VVSDEVHLIDDRNRGPTLEVTLAKLRRLNPGMQVVALSATVGNADEIANWLDAALVDTDW 201
Query: 129 RPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSS 188
RP V + +FD S E+ + + V +++ L+F +S
Sbjct: 202 RPIDLQMGVHYGNAL--NFDDGSTREVPVEGSEKQEAA----LVRDILEEGGSSLVFVNS 255
Query: 189 KIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHAD 248
+ A RL + ++ E +L E ++E++D + ST L +C+ G A+HHA
Sbjct: 256 RRNAEAAARRLGQVSTRQLTDDERAELAELAEEIREDSDTETSTELADCVERGAAFHHAG 315
Query: 249 LTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRD------SYVGRDFISLNM 302
L++ +R L+E+A+ L++I T TLAAGVN PA+RVI+RD S G + +
Sbjct: 316 LSSTQRTLVEDAFRDRLLKVISATPTLAAGVNTPARRVIVRDWRRFDPSAGGMAPLDVLE 375
Query: 303 YKQMVGRAGRTGLQESGESIMLCKTMQDFLR-FSSMMNAGPEPISSHMDP-PTLVDLILE 360
QM+GRAGR GL GE+++L K+ +D F + A PE + S + P L +L
Sbjct: 376 VHQMMGRAGRPGLDPYGEAVLLAKSHEDSQELFDRYIWAEPEAVRSKLAAEPALRTHVLA 435
Query: 361 VVAANLCSSLEDVKTLIKHTLFYQLKSPEDQ-QTFLETTLSEIVASLLASKGTMLTMNEA 419
+A+ + E++ ++ TL+ + + +T +T L + ++ + + +E
Sbjct: 436 TIASGFARTREELLEFLEATLYASQSTEAGRLETVTDTVLQYLESNDFIERDGGESDDEG 495
Query: 420 GHL-SLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLE---YRIP 475
+ TS A A Q D L + L + ++ L+ + +V LE R
Sbjct: 496 DAAGAFTSAADLAAQQSTQTDERLEATT--LGHTVSRLYLDPMSAAEIVHGLEDADERPT 553
Query: 476 SDGI--LLSRS-KVYDRYTKFHPQTL-------RVAEALGVTENLVALNVTGKLKDEKKA 525
+ G+ L+SR+ +Y+ Y + R E LG T + N + +D
Sbjct: 554 ALGLYQLVSRTPDMYELYLRSGEDDTFGELFYEREVELLGDTPSEYEDN---RFED---- 606
Query: 526 LLCRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELWC 585
L +L D + D+ ++ + Y I L+ ++ + E+ W
Sbjct: 607 WLAALKTGKLLADWASEDDEDRLTERYQIGPGDLRGKVDTAEWLLGAAESLAREIDSEWT 666
Query: 586 YKQLLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAG 626
+ + + + L L+ + GV RAR+L G
Sbjct: 667 VA--VREARARVEHGVGEELLELVSVGGVGRKRARRLYEVG 705
>gi|154421213|ref|XP_001583620.1| Type III restriction enzyme, res subunit family protein
[Trichomonas vaginalis G3]
gi|121917863|gb|EAY22634.1| Type III restriction enzyme, res subunit family protein
[Trichomonas vaginalis G3]
Length = 787
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 165/642 (25%), Positives = 292/642 (45%), Gaps = 96/642 (14%)
Query: 41 SIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSI 100
SI +CT E+ LI + I+ + +D LI+IDE HM++ RG +E +++K+L K
Sbjct: 134 SIAVCTFERAHSLINAAIRSDYLDSFKLIIIDEIHMISYEGRGSNVEAIIAKLLLATKPP 193
Query: 101 QIFAMSATIGNINA--LSTFIEGITYVENSRPTKHSEY-VTVDKRVFQSFDGK------- 150
+I +SATI N + +++ + +R + ++Y ++V + +GK
Sbjct: 194 RIIGLSATISNEDCEIYKKWMDAFIFRSENRSSTLNQYLLSVQGELIPIVNGKFQKAQKV 253
Query: 151 -SLTEIYADNLDYSLTGSGP--DAVLHLVQGNLMVLIFCSSKIACSNLALRLQFDRFPGT 207
L E N+ +L P + V++ + N VL F +++ ++ A L
Sbjct: 254 YPLKEGSTSNVKRAL----PLIEDVINFAE-NANVLYFVNTRREAASAAKFL-------A 301
Query: 208 KEYKKQEKEDLIEALKEENDGKL---------STNLEECILYGVAYHHADLTAGERRLIE 258
K K + K D I ++EE L S++L +L GV+YHHA L ER+L+E
Sbjct: 302 KHIKIETKNDYIIKMREEIAVNLTRFAQGQTDSSDLAPLVLKGVSYHHAGLLVEERKLVE 361
Query: 259 EAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGRDF------ISLNMYKQMVGRAGR 312
E + G + I+ T+TL+AG+N ++I D+ R++ ++ ++Y QM GRAGR
Sbjct: 362 EGFRNGAISIVVATTTLSAGINFINVALVIIDTIYRRNYQKPPTIMTPSLYTQMAGRAGR 421
Query: 313 T----GLQ---ESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVD-LILEVVAA 364
T G+ ESG + +Q+ + N E I SH+ + D L+V+
Sbjct: 422 TEENPGMAVTIESGSFANEREIIQE------LANRKIESIQSHLLEASEFDRYFLQVI-- 473
Query: 365 NLCSSLEDVKTLIKH---TLFYQLK---SPEDQQTFLETTLSEIVASLLASKGTMLTMNE 418
C S D K L K+ FY K + E+ Q ++ ++ + ++L NE
Sbjct: 474 --CFSKLD-KNLYKNFPLFSFYAAKKGMTEEESQNIIDESIKRL------KNLSLLNENE 524
Query: 419 AGHLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLE--YRIPS 476
T + + A +S D L +Y L + L++ +H++FL P + + +P
Sbjct: 525 ----DPTDLGRGIALANMSIDEGLEVYKFLQRANTSLDLIDKIHLMFLCTPAQNDFSVPE 580
Query: 477 DGILLSRSKVYDRYTKFHPQTLRVAEALGVT----ENLVALNVTGKLK---DEKKALLCR 529
++V++ K H + LGV E + +++ G D + R
Sbjct: 581 -----YSNQVWEDIFKRHSTVIET--KLGVRKDEFEKKIIMSIRGNNVMNLDNIDTIFQR 633
Query: 530 FFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEE--LPELWCYK 587
F + IL D+ + +++ + YG+ H Q+ FA +V + C +P L +
Sbjct: 634 LFASSILLDLTDEIGIKQIEEKYGVARGHCQSLQRNAHAFAVQVMKICNSCGMPML---E 690
Query: 588 QLLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSS 629
+ +T++Y L +LM +PG+ AR L N+G S
Sbjct: 691 AAINQFRKTILYGAKSELLSLMRIPGIPRFEARLLFNSGMES 732
>gi|327401713|ref|YP_004342552.1| ski2-type helicase [Archaeoglobus veneficus SNP6]
gi|327317221|gb|AEA47837.1| ski2-type helicase [Archaeoglobus veneficus SNP6]
Length = 699
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 155/630 (24%), Positives = 281/630 (44%), Gaps = 72/630 (11%)
Query: 14 EEFKFYLEEYAGVK-----GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGL 68
EEF+ + E G K G Y L++ I + T EK L+ + + + ++
Sbjct: 87 EEFRKW--EKIGAKVGMSIGDYESRDEWLSENDIVVTTSEKADSLMRN--RAGWLKDVTC 142
Query: 69 IVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVENS 128
+V+DE H+L+ +RG LE +++K+ + +I A+SATI N + ++ +++ + +
Sbjct: 143 LVVDEVHLLDSAKRGATLEILMAKMRKVCNP-RIIALSATIPNADEIAAWLDAVCVKSDW 201
Query: 129 RPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDA---VLHLVQGNLMVLIF 185
RP E + + R+ E YAD + G D VL ++ VL+F
Sbjct: 202 RPVPLFEGIFFNGRL----------EFYADGVLTEQRKIGKDIMALVLDCLEQGGQVLVF 251
Query: 186 CSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYH 245
S++ + AL+L F ED+ +A+ EEN+G++S L +CI G A+H
Sbjct: 252 DSTRRNAESTALKLAQRVFRYI-----DSNEDIAKAVLEENEGEMSQRLADCIRMGTAFH 306
Query: 246 HADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGRDFISLNM--- 302
HA L +R +E+A+ G ++++ T TLAAGVNLPA+RVII+ + + S +
Sbjct: 307 HAGLLNSQRTAVEKAFREGRVKVVVATPTLAAGVNLPARRVIIKSYHRFGGYASEPIKTI 366
Query: 303 -YKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGP-EPISSHMDPPTLVDLILE 360
YKQMVGRAGR GL E GE++++ ++ + + G E I+S + +
Sbjct: 367 EYKQMVGRAGRPGLDERGEAVVIVRSNRSREEVLNRYIFGEVERITSKLGAENHLRFHTL 426
Query: 361 VVAANLCSSLEDVKTLIKHTLFYQLKSPEDQQTFLETTLSEIVASLLASKGTMLTMNEAG 420
++++ S++ ++ + T F+ + L I+ L + ML E
Sbjct: 427 ALSSDF-RSIDALENFFESTFFFH-----QNEISARYELERILLQL--ERWEMLEFGE-N 477
Query: 421 HLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEYRIPS-DGI 479
+S+T + + + + YS+ L + F + +LH++ R P + +
Sbjct: 478 SISVTELGDMVSRLYIDPLTGFMFYSE-LSKRDEFTEIAALHLIC-------RTPDMENL 529
Query: 480 LLSRSKVYDRYTKFHPQTLRVAEALGVTENLVALNVTGKLKDEKKALLCRFFHACILYDV 539
+ +S D + + EA+ + L + L A L++
Sbjct: 530 YIKKS---DDWVE--------EEAIAFMDELT--YAPSPYSADYDWFLAEVKTAMCLHEW 576
Query: 540 LNFDNHQKVAKMYGIQNSHLQNFLNVTSYFA---SKVYRFCEELPELWCYKQLLTDLPQT 596
+N + ++ + YGI L + + A SK+ F K + L +
Sbjct: 577 INESDEDEICEKYGIAPGDLMRVVETAEWLAYALSKIAAFINH-----AQKSFFSGLVKR 631
Query: 597 LMYCRAPNLRALMDLPGVKIGRARQLLNAG 626
+ Y L L+++ G+ RAR+L AG
Sbjct: 632 IKYGVKEELLDLVEIKGIGRARARKLYTAG 661
>gi|410671902|ref|YP_006924273.1| DEAD/DEAH box helicase domain-containing protein [Methanolobus
psychrophilus R15]
gi|409171030|gb|AFV24905.1| DEAD/DEAH box helicase domain-containing protein [Methanolobus
psychrophilus R15]
Length = 742
Score = 156 bits (394), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 159/659 (24%), Positives = 283/659 (42%), Gaps = 82/659 (12%)
Query: 10 AKAAEEFKFYLE------EYAGVK-----GQYPPTKRQLNKKSIYICTIEKGSKLIGSLI 58
A A+E+F + E + G+K G + L I + T EK L+ +
Sbjct: 78 ALASEKFDRFREFSSIALKEGGIKVGISTGDFESRDEWLGSNDIIVATSEKTDSLLRN-- 135
Query: 59 QENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTF 118
+ +++I IV+DE H+L+ RGP LE ++K++ L QI A+SAT+GN ++ +
Sbjct: 136 GTSWMEDITTIVVDEVHLLDSANRGPTLEVTLTKLMKLNPGCQIIALSATVGNAYEVANW 195
Query: 119 IEGITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLT------GSGPDA- 171
++ + RPT E V Y N+++ + SG DA
Sbjct: 196 LKAELVLSEWRPTDLMEGV-----------------FYGGNINFRGSQKLVPDASGDDAI 238
Query: 172 --VLHLVQGNLMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEK-EDLIEALKEENDG 228
V+ ++ L+F SS+ A R + G + K ++ ++++E + E +
Sbjct: 239 NLVIDTLESGGQCLVFESSRKNSVGFARRAG-TKVSGLLDRKTRDALDEIVEQVIETGES 297
Query: 229 KLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVII 288
+ S L +CI G A+HHA L + R+L+E+ + A ++++ T TLAAG+NLPA+RVI+
Sbjct: 298 EASKVLAQCIRNGTAFHHAGLNSAHRKLVEDGFRANLIKMVASTPTLAAGLNLPARRVIV 357
Query: 289 R-----DSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDF-LRFSSMMNAGP 342
R D G I + YKQM GRAGR L GE++++ K+ + L F + + A
Sbjct: 358 RSYKRYDPNFGMQPIPVLDYKQMAGRAGRPRLDPYGEAVLIAKSYNEMELLFENYIEASA 417
Query: 343 EPISSHMDPP-TLVDLILEVVAANLCSSLEDVKTLIKHTLFYQLKSPEDQQTFLETTLSE 401
E I S + L IL + ++ + + I+ T F ++ + + + E
Sbjct: 418 EDIWSKLGTENALRTHILSTIVNGFATTRDGLMEFIEATFFAH----QNDTWGIVSVVDE 473
Query: 402 IVASLLASKGTMLTMNEAGHLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSL 461
+ L K + HL+ T + K + II L N L L
Sbjct: 474 CLEFLKDHK----MLEGETHLAATPMGKLVSMLYIDPLSAAIILEG-LGKAANVTDLTLL 528
Query: 462 HMLFLVIPLEYRIPSDGILLSRSKVYDRYTKFHPQTLRVAEALGVTENLVALNVTGKLKD 521
H++ + P L R+ Y+ +F L E + K D
Sbjct: 529 HLI-------CKTPDMRQLYLRAGDYESMNEF---------VLSNMEEFCEVPAPSKATD 572
Query: 522 EKKALLCRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYF---ASKVYRFCE 578
+ L A ++ D +N + ++K++ + + + F ++ + AS++ R
Sbjct: 573 -YEWFLGEVKTALLILDWINERSMDDISKVFNVGDGDIHAFADLAEWLMHSASRLARVTG 631
Query: 579 ELPELWCYKQLLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIARAD 637
+ + + + Y L L+ + G+ RAR+L ++G S+E + AD
Sbjct: 632 H-----SSADMAVTIEKRIHYGARQELMELVGIRGIGRVRARKLYDSGLHSIEDLRSAD 685
>gi|448366919|ref|ZP_21554950.1| ski2-like helicase [Natrialba aegyptia DSM 13077]
gi|445653828|gb|ELZ06688.1| ski2-like helicase [Natrialba aegyptia DSM 13077]
Length = 806
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 122/393 (31%), Positives = 198/393 (50%), Gaps = 37/393 (9%)
Query: 15 EFKFYLEEYA---GVK-GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE--NRIDEIGL 68
EF Y EE+ GV G Y T L K I + T EK + SL++ + + ++
Sbjct: 87 EFDAY-EEFGVTTGVATGNYESTSDWLATKDIVVATSEK----VDSLVRNGADWLSDLTC 141
Query: 69 IVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVENS 128
+V DE H++++ RGP LE ++K+ L +Q+ A+SAT+GN + L+ +++ +
Sbjct: 142 VVSDEVHLIDDRNRGPTLEVTLAKLRRLNPQLQVVALSATVGNADELADWLDASLVDTDW 201
Query: 129 RPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVL--HLVQGNLMVLIFC 186
RP V + +FD S E+ D G +A L ++Q L+F
Sbjct: 202 RPIDLQMGVHYGNAL--NFDDGSTREVPVDG------GEKQEAALVRDILQEGGSSLVFV 253
Query: 187 SSKIACSNLALRL-QFDRFPGTKEYKKQEKEDLIE---ALKEENDGKLSTNLEECILYGV 242
+S+ A RL Q ++E E+ DL E ++E++D + S +L +C+ G
Sbjct: 254 NSRRNAEAAARRLGQV----SSRELTAGERADLEELAAEIREDSDTETSQDLADCVERGS 309
Query: 243 AYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRD------SYVGRD 296
A+HHA L++ +R L+E+A+ L++I T TLAAGVN PA+RVI+RD S G
Sbjct: 310 AFHHAGLSSTQRSLVEDAFRDRHLKVISATPTLAAGVNTPARRVIVRDWRRFDPSAGGMS 369
Query: 297 FISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLR-FSSMMNAGPEPISSHMDP-PTL 354
+ + QM+GRAGR GL GE+++L K + F + A PEP+ S + P L
Sbjct: 370 PLDVLEVHQMMGRAGRPGLDPYGEAVLLAKNHDESEELFDRYVWADPEPVRSKLAAEPAL 429
Query: 355 VDLILEVVAANLCSSLEDVKTLIKHTLFYQLKS 387
+L +A+ + E + ++ TL+ S
Sbjct: 430 RTHVLATIASGFARTREGLLEFLEATLYASQSS 462
>gi|298674154|ref|YP_003725904.1| DEAD/DEAH box helicase [Methanohalobium evestigatum Z-7303]
gi|298287142|gb|ADI73108.1| DEAD/DEAH box helicase domain protein [Methanohalobium evestigatum
Z-7303]
Length = 733
Score = 155 bits (393), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 100/328 (30%), Positives = 163/328 (49%), Gaps = 16/328 (4%)
Query: 28 GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILE 87
G + T L I + T EK L+ + + + + +I IV+DE H+L+ RGP LE
Sbjct: 102 GDFDSTDEWLGSNDIIVATSEKADSLLRN--ETSWMKDITTIVVDEIHLLDSADRGPTLE 159
Query: 88 CVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSF 147
++K+L L + QI +SATIGN ++ +++ RP + E V ++ +
Sbjct: 160 ITIAKLLRLNPNSQIIGLSATIGNAEEIAGWLDAELVQSQWRPIELYEGVFLEDNINFKQ 219
Query: 148 DGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRLQFDRFPGT 207
K + I D + + VL + N L+F SS+ C+ A + +
Sbjct: 220 SQKPIKNIVKD--------TAVNLVLDTIDENGQCLVFESSRRNCAGFAKKAKSKVGKSL 271
Query: 208 KEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQ 267
+ E ++ E + E +D + + L CI G A+HHA L + +R+++E+ + ++
Sbjct: 272 DKGLLAELNNIAEEVLETSDTETTKELASCIKRGTAFHHAGLNSAQRKIVEDNFRNNKIK 331
Query: 268 IICCTSTLAAGVNLPAQRVIIR-----DSYVGRDFISLNMYKQMVGRAGRTGLQESGESI 322
+I T TLAAG+NLPA+RVI+R D G I + YKQM GRAGR L GES+
Sbjct: 332 VISSTPTLAAGLNLPARRVIVRNYKRYDPNFGMQPIPVLDYKQMAGRAGRPSLDPYGESV 391
Query: 323 MLCKTMQDFLR-FSSMMNAGPEPISSHM 349
++ T +F ++A PE I S +
Sbjct: 392 LISHTYNEFTDLLDRYIDAEPEDILSKL 419
>gi|448312655|ref|ZP_21502395.1| ski2-like helicase [Natronolimnobius innermongolicus JCM 12255]
gi|445600851|gb|ELY54851.1| ski2-like helicase [Natronolimnobius innermongolicus JCM 12255]
Length = 783
Score = 155 bits (392), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 114/383 (29%), Positives = 192/383 (50%), Gaps = 25/383 (6%)
Query: 14 EEFKFYLEEYA---GVK-GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE--NRIDEIG 67
+EF Y EE+ GV G Y T L K I + T EK + SL++ + + E+
Sbjct: 86 DEFAAY-EEFGVTVGVTTGNYESTDDWLATKDIIVATSEK----VDSLVRNGADWLSELT 140
Query: 68 LIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVEN 127
+V DE H++++ RGP LE ++K+ L +Q+ A+SAT+GN + ++ +++ +
Sbjct: 141 CVVSDEVHLIDDRNRGPTLEVTLAKLRQLNPGMQVVALSATVGNADEIADWLDAALVDTD 200
Query: 128 SRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCS 187
RP V + +FD S E+ + + V ++Q L+F S
Sbjct: 201 WRPIDLQMGVHYGNAL--NFDDGSTREVPVEGSEKQEAA----LVRDILQEGGSSLVFVS 254
Query: 188 SKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHA 247
S+ A RL + ++ E DL +++++D + S +L +C+ G A+HHA
Sbjct: 255 SRRNAEAAASRLGQVSSRELSDEERAELADLAAEIRDDSDTETSRDLADCVEQGAAFHHA 314
Query: 248 DLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRD------SYVGRDFISLN 301
L+A +R L+E+A+ L++I T TLAAGVN PA+RVI+RD S G + +
Sbjct: 315 GLSATQRSLVEDAFRDRLLKVISATPTLAAGVNTPARRVIVRDWRRFDPSAGGMAPLDVL 374
Query: 302 MYKQMVGRAGRTGLQESGESIMLCKTMQDFLR-FSSMMNAGPEPISSHMDP-PTLVDLIL 359
QM+GRAGR GL GE+++L K+ + F + A PE + S + P L +L
Sbjct: 375 EVHQMMGRAGRPGLDPYGEAVLLAKSHDESEELFDRYIWAEPEAVRSKLAAEPALRTHVL 434
Query: 360 EVVAANLCSSLEDVKTLIKHTLF 382
+A+ + + ++ TL+
Sbjct: 435 ATIASGFARTRGGLLEFLEATLY 457
>gi|448417005|ref|ZP_21579108.1| ski2-like helicase [Halosarcina pallida JCM 14848]
gi|445678688|gb|ELZ31176.1| ski2-like helicase [Halosarcina pallida JCM 14848]
Length = 819
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 119/391 (30%), Positives = 191/391 (48%), Gaps = 43/391 (10%)
Query: 15 EFKFYLEEYA---GVK-GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENR--IDEIGL 68
EF+ + EE+ GV G Y + L+ + I + T EK + SLI+ N + ++
Sbjct: 87 EFERW-EEFGIDVGVSTGNYESSGEWLSSRDIIVATSEK----VDSLIRNNAGWVSDLSC 141
Query: 69 IVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVENS 128
+V DE H++N+ RGP LE + K+ + +Q+ A+SAT+GN ++ +++
Sbjct: 142 VVADEVHLVNDGHRGPTLEVTLGKLRKINAGLQVVALSATVGNAEEVAEWLDATLVQSEW 201
Query: 129 RPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNL----MVLI 184
RP V + SFD S E+ G G LV L L+
Sbjct: 202 RPIDLKMGVHYGNAI--SFDDGSQREVP--------VGKGGRQTSALVADTLDEDGSSLV 251
Query: 185 FCSSKIACSNLALRLQFDRFPGTKEY----KKQEKEDLIEALKEENDGKLSTNLEECILY 240
F +S+ A RL+ T EY ++ E +L + +++ +D + S L C+
Sbjct: 252 FVNSRRNAEAAAKRLK----DVTAEYLTGEERSELAELAQEIRDVSDAETSDTLANCVAK 307
Query: 241 GVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRD------SYVG 294
G A+HHA L + RRL+EEA+ A +++ + T TLAAGVN P++RVI+RD + G
Sbjct: 308 GAAFHHAGLASEHRRLVEEAFRARSVKTVSATPTLAAGVNTPSRRVIVRDWQRYDGEFGG 367
Query: 295 RDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQ--DFLRFSSMMNAGPEPISSHMDP- 351
+ + QM+GRAGR GL GE+++L K + D L F + A EP+ S +
Sbjct: 368 MKPLDVLEVHQMMGRAGRPGLDPYGEAVLLAKDSETRDQL-FERYVWADAEPVRSKLAAE 426
Query: 352 PTLVDLILEVVAANLCSSLEDVKTLIKHTLF 382
P L +L VA+ + E + + TL+
Sbjct: 427 PALRTHLLATVASGFAHTREGLLEFLDRTLY 457
>gi|167383171|ref|XP_001736435.1| DNA double-strand break repair Rad50 ATPase [Entamoeba dispar
SAW760]
gi|165901222|gb|EDR27340.1| DNA double-strand break repair Rad50 ATPase, putative [Entamoeba
dispar SAW760]
Length = 835
Score = 155 bits (391), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 182/670 (27%), Positives = 321/670 (47%), Gaps = 50/670 (7%)
Query: 6 YQSLAKAAEE-FKFYLEEYA-GVKGQYPPTKRQLNKK-SIYICTIEKGSKLIGSLIQENR 62
Y S+A+ EE FK LE +KG + R+++K+ I I TIEKG+ +I +I+E
Sbjct: 112 YVSMAQEKEEYFKEILESIKINIKGYFQN--RKIDKEFDIGIFTIEKGNGIINKMIEEKS 169
Query: 63 IDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGI 122
I+E+ +I+IDE HM+ + +RG I+E +++K+ L+K IQI MSATI NI+ +I+
Sbjct: 170 IEEVSIIIIDEIHMVFDKKRGQIIEKIINKIGSLEKKIQIIGMSATIKNISIFEKWIKAK 229
Query: 123 TYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMV 182
TY RP K EY+ +V ++ +GK + +I + D + +G V
Sbjct: 230 TYESTYRPIKIEEYIVCKGKV-RNKEGK-IEKILKEEGDIENIIEITEEAKKEGKG---V 284
Query: 183 LIFCSSKIACSNLALRL-QFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLE--ECIL 239
+ FCS+K C + + + +E K+ KE+ IE +KE K E I
Sbjct: 285 ICFCSTKKGCEKMGKEIVKRIEKKKIEEINKEIKEERIEMIKEMERSKFGIEEEFKNMIK 344
Query: 240 YGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGRDFIS 299
YG+ YHH+ +T ER +IE+++ G + +I TSTLA GVNLPA RVI + +G+++++
Sbjct: 345 YGIVYHHSGITIEEREIIEKSFKKGIITLIIATSTLALGVNLPASRVIFDKAKIGKEYLT 404
Query: 300 LNMYKQMVGRAGRTGLQESGESIMLCK-----TMQDFLRFSSMMNAGPEPISSHMDPPTL 354
Y+QM GRAGR G+ E GES + CK +Q+ ++ + N + +
Sbjct: 405 NTQYQQMSGRAGRFGIDEKGESYIFCKEIEIPIIQNIMKTINNNNKEIKEEKQEIKEIEE 464
Query: 355 V-------------DLILEVVAANLCSSLEDVKTLIKHTLF-YQLKSPEDQQTFLETTLS 400
+ ILE + + + +D++ I+ TL+ Y+ K + + + +
Sbjct: 465 EIEEIKEEQEIQDKEDILEGIYNGIIENKKDIEKWIEKTLYWYKNKEKKGAEEWKKIYSE 524
Query: 401 EIVASLLASKGTMLTM-NEAGH--LSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKL---N 454
+I+ L +G + + NE G + I +A V+ G+ + IY ++ L N
Sbjct: 525 KIINILKNDEGLIEEIENEKGEKKIKCNQIGRAIVKGGMGINKSKEIYFNINEGFLKNNN 584
Query: 455 FCLLNSLHMLFLVIPLEYRIPSDGILLSRSKVYDRYTK---FHPQTLRVAEALGVT---- 507
+ ++ L+L I + I + + D K + + + +G+
Sbjct: 585 NIINKEIYYLYLGINYDNEINWNCFEKKLEDIEDLKNKKINLYNEFKELMNIIGINPVFI 644
Query: 508 ---ENLVALNVTGKLKDEKKALLCRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLN 564
E + + ++ K+ + K + +F++ ILY+ +N N ++ GI LQ N
Sbjct: 645 CYMETMKNVKLSNKIIN-KIFIHKKFYYLIILYEFINEKNILQIINEMGITRGILQQLQN 703
Query: 565 VTSYFASKVYRFCEELPELWCYKQLLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLN 624
T + + +F EL + Q L L + + ++ ++ L G+ I AR
Sbjct: 704 NTITTLNMIIQFSIELN-YFDLSQNLKLLIDRIKFGVRTDILQIIHLDGISIKIARTFFL 762
Query: 625 AGYSSLELIA 634
G +++ IA
Sbjct: 763 FGLNNISKIA 772
>gi|297618758|ref|YP_003706863.1| DEAD/DEAH box helicase domain-containing protein [Methanococcus
voltae A3]
gi|297377735|gb|ADI35890.1| DEAD/DEAH box helicase domain protein [Methanococcus voltae A3]
Length = 878
Score = 155 bits (391), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 129/423 (30%), Positives = 216/423 (51%), Gaps = 41/423 (9%)
Query: 10 AKAAEEFKFYLEEYA--GVK-----GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENR 62
A A E+F + E+Y G+K G Y +K L++ I I T EK + SL+++
Sbjct: 85 ALATEKFDEFREKYNKFGLKIGISIGDYD-SKENLSRYDIIIMTSEK----LDSLMRKKN 139
Query: 63 ---IDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFI 119
++++ +++IDE H+L + +RG LE V++K+ L IQI +SATIGN L+ ++
Sbjct: 140 TTWLNDVSVVIIDEIHLLGDKERGGTLEIVLTKLKML--PIQIIGLSATIGNSEELANWL 197
Query: 120 EGITYVENSRP------------TKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGS 167
+ V+ RP K + Y D +V +G++ N S +
Sbjct: 198 DAKLVVDTWRPVELKKGLYHPDENKVNYYTIEDYKVVNGENGENKQIKPLKNFGSSKS-E 256
Query: 168 GPDAVLHLVQGNLMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEK--EDLIEALKEE 225
+ ++ V+ + L+FCSSK + A + ++ E + +++ L E
Sbjct: 257 ISNLIVDCVKNSGSCLVFCSSKRNAVSEAKKNDLAKYLTNDEQGELNNLSSEILNVL--E 314
Query: 226 NDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQR 285
K L ECI GVA+HHA L +R+L+EE + +++ICCT TL+AG+NLP +R
Sbjct: 315 KPSKTCEQLSECIKKGVAFHHAGLAMKQRKLVEEGFRKRIIKVICCTPTLSAGLNLPCRR 374
Query: 286 VIIRDS--YVGRDFISL-NM-YKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAG 341
IIRD+ + G+ F ++ NM +Q +GRAGR GL GE I++ K + M+
Sbjct: 375 AIIRDTKRFDGKGFSNIPNMEIQQCIGRAGRPGLDPYGEGIIVVKKSSEVGDNLYMLRGK 434
Query: 342 PEPISSHM-DPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQLKSPEDQQTFLETTLS 400
PE I S++ + TL IL + + SS ++K +K+T FY ++ D + +E
Sbjct: 435 PEEIYSNISNKKTLRIFILGSIFSGEISSFGELKQFMKNT-FYAVQYG-DYEKIVEDIRD 492
Query: 401 EIV 403
E++
Sbjct: 493 EVI 495
>gi|21226527|ref|NP_632449.1| ski2-like helicase [Methanosarcina mazei Go1]
gi|24418450|sp|Q8PZR7.1|HELS_METMA RecName: Full=Putative ski2-type helicase
gi|20904797|gb|AAM30121.1| helicase [Methanosarcina mazei Go1]
Length = 730
Score = 155 bits (391), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 116/390 (29%), Positives = 188/390 (48%), Gaps = 31/390 (7%)
Query: 10 AKAAEEFKFYLE-EYAGVK-----GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRI 63
A A+E+F+ + E G++ G Y L I + T EK L+ + + +
Sbjct: 78 ALASEKFRRFQEFSVLGMRVGISTGDYDRRDEGLGINDIIVATSEKTDSLLRN--ETAWM 135
Query: 64 DEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGIT 123
EI ++V DE H+++ P RGP LE +SK+ + S Q+ A+SAT+GN + L+ +++
Sbjct: 136 QEISVVVADEVHLIDSPDRGPTLEITLSKLRRMNPSCQVLALSATVGNADELAAWLDAEL 195
Query: 124 YVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVL 183
+ RPT E V + + K + + D + VL ++ L
Sbjct: 196 VLSEWRPTDLMEGVFYNGIFYCKDKEKPVGQPTKDE--------AVNLVLDTIKEGGQCL 247
Query: 184 IFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEE----NDGKLSTNLEECIL 239
+F SS+ C A + K+ E + + + +E ++ +S+ L C+
Sbjct: 248 VFESSRKNCMGFAKKA----VSAVKKTLSNEDRETLAGIADEIIENSETDVSSVLATCVR 303
Query: 240 YGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIR-----DSYVG 294
G A+HHA LT R L+E + G ++II T TLAAG+NLPA+RVIIR S G
Sbjct: 304 SGTAFHHAGLTTPLRELVENGFREGRIKIISSTPTLAAGLNLPARRVIIRSYRRYSSDSG 363
Query: 295 RDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFL-RFSSMMNAGPEPISSHMDPP- 352
I + YKQM GRAGR L GE+++L K+ ++F+ F + AG E I S +
Sbjct: 364 MQPIPVLEYKQMAGRAGRPRLDPYGEAVLLAKSYEEFVFLFEKYIEAGAEDIWSKLGTEN 423
Query: 353 TLVDLILEVVAANLCSSLEDVKTLIKHTLF 382
L IL ++ + E++ ++ T F
Sbjct: 424 ALRTHILSTISNGFARTREELMDFLEATFF 453
>gi|448351163|ref|ZP_21539972.1| ski2-like helicase [Natrialba taiwanensis DSM 12281]
gi|445634847|gb|ELY88021.1| ski2-like helicase [Natrialba taiwanensis DSM 12281]
Length = 804
Score = 155 bits (391), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 121/392 (30%), Positives = 196/392 (50%), Gaps = 35/392 (8%)
Query: 15 EFKFYLEEYA---GVK-GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE--NRIDEIGL 68
EF Y EE+ GV G Y T L K I + T EK + SL++ + + ++
Sbjct: 87 EFDAY-EEFGVTTGVATGNYESTNDWLATKDIVVATSEK----VDSLVRNGADWLSDLTC 141
Query: 69 IVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVENS 128
+V DE H++++ RGP LE ++K+ L +Q+ A+SAT+GN + L+ +++ +
Sbjct: 142 VVSDEVHLIDDRNRGPTLEVTLAKLRRLNPQLQVVALSATVGNADELADWLDASLVDTDW 201
Query: 129 RPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVL--HLVQGNLMVLIFC 186
RP V + +FD S E+ D G +A L ++Q L+F
Sbjct: 202 RPIDLQMGVHYGNAL--NFDDGSTREVPVDG------GEKQEAALVRDILQEGGSSLVFV 253
Query: 187 SSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIE---ALKEENDGKLSTNLEECILYGVA 243
+S+ A RL ++E E+ DL E ++E++D + S +L +C+ G A
Sbjct: 254 NSRRNAEAAARRLGQ---VSSRELTAGERTDLEELAAEIREDSDTETSQDLADCVERGSA 310
Query: 244 YHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRD------SYVGRDF 297
+HHA L++ +R L+E A+ L++I T TLAAGVN PA+RVI+RD S G
Sbjct: 311 FHHAGLSSTQRSLVENAFRNRLLKVISATPTLAAGVNTPARRVIVRDWRRFDPSAGGMSP 370
Query: 298 ISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLR-FSSMMNAGPEPISSHMDP-PTLV 355
+ + QM+GRAGR GL GE+++L K + F + A PEP+ S + P L
Sbjct: 371 LDVLEVHQMMGRAGRPGLDPYGEAVLLAKNHDESEELFDRYVWADPEPVRSKLAAEPALR 430
Query: 356 DLILEVVAANLCSSLEDVKTLIKHTLFYQLKS 387
+L +A+ + E + ++ TL+ S
Sbjct: 431 THVLATIASGFARTREGLLEFLEATLYASQSS 462
>gi|448364118|ref|ZP_21552712.1| ski2-like helicase [Natrialba asiatica DSM 12278]
gi|445645006|gb|ELY98013.1| ski2-like helicase [Natrialba asiatica DSM 12278]
Length = 827
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 122/393 (31%), Positives = 198/393 (50%), Gaps = 37/393 (9%)
Query: 15 EFKFYLEEYA---GVK-GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE--NRIDEIGL 68
EF Y EE+ GV G Y T L K I + T EK + SL++ + + ++
Sbjct: 87 EFDAY-EEFGVTTGVATGNYESTSDWLATKDIVVATSEK----VDSLVRNGADWLSDLTC 141
Query: 69 IVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVENS 128
+V DE H++++ RGP LE ++K+ L +Q+ A+SAT+GN + L+ +++ +
Sbjct: 142 VVSDEVHLIDDRNRGPTLEVTLAKLRRLNPQLQVVALSATVGNADELADWLDAELVDTDW 201
Query: 129 RPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVL--HLVQGNLMVLIFC 186
RP V + +FD S E+ D G +A L ++Q L+F
Sbjct: 202 RPIDLQMGVHYGNAL--NFDDGSTREVPVDG------GEKQEAALVRDILQEGGSSLVFV 253
Query: 187 SSKIACSNLALRL-QFDRFPGTKEYKKQEKEDLIE---ALKEENDGKLSTNLEECILYGV 242
+S+ A RL Q ++E E+ DL E ++E++D + S +L +C+ G
Sbjct: 254 NSRRNAEAAARRLGQV----SSRELTAGERADLEELAAEIREDSDTETSQDLADCVERGS 309
Query: 243 AYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRD------SYVGRD 296
A+HHA L++ +R L+E+A+ L++I T TLAAGVN PA+RVI+RD S G
Sbjct: 310 AFHHAGLSSTQRSLVEDAFRDRLLKVISATPTLAAGVNTPARRVIVRDWRRFDPSAGGMS 369
Query: 297 FISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLR-FSSMMNAGPEPISSHMDP-PTL 354
+ + QM+GRAGR GL GE+++L K + F + A PEP+ S + P L
Sbjct: 370 PLDVLEVHQMMGRAGRPGLDPYGEAVLLAKNHDESEDLFDRYVWADPEPVRSKLAAEPAL 429
Query: 355 VDLILEVVAANLCSSLEDVKTLIKHTLFYQLKS 387
+L +A+ + E + ++ TL+ S
Sbjct: 430 RTHVLATIASGFARTREGLLEFLEATLYASQSS 462
>gi|15920808|ref|NP_376477.1| helicase [Sulfolobus tokodaii str. 7]
gi|24418452|sp|Q974S1.1|HELS_SULTO RecName: Full=Putative ski2-type helicase
gi|342306252|dbj|BAK54341.1| Holliday junction migration helicase [Sulfolobus tokodaii str. 7]
Length = 704
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 167/647 (25%), Positives = 281/647 (43%), Gaps = 89/647 (13%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVK-----GQYPPTKRQLNKKSIYICTIEKGSKLIG 55
+ +EKY + FK + E G+K G Y L I + T EK L
Sbjct: 83 LTNEKYNT-------FKDW--ETLGIKTGMTSGDYDTDDAWLENYDIIVTTYEKLDSLWR 133
Query: 56 SLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINAL 115
+ ++E+ V+DEFH LN+P+RGP +E V + KK + +SATI N +
Sbjct: 134 H--KAKWLNEVSYFVLDEFHYLNDPERGPTVESVAIRA---KKRGIVLGLSATISNGKEI 188
Query: 116 STFIEGITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAV--- 172
+ ++ N RP E + ++ K +Y DN + G DA+
Sbjct: 189 ANWLNAELVATNWRPVPLKEGIIYPEK-------KGFVVVYKDNTSRKVYGD--DAIIAY 239
Query: 173 -LHLVQGNLMVLIFCSSKIACSNLALRL-QFDRFPGTKEYKKQEKEDLIEALKEENDGKL 230
L +V VL+F SS+ N A ++ Q+ F ++ K E + +KE D
Sbjct: 240 TLDIVSKGGQVLVFRSSRKLAENTARKIVQYMNFVKLEDKKLLE---IARKIKEVEDAGS 296
Query: 231 ST--NLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVII 288
+ +L +L GVAYHHA L+ G R +IE ++ L++I T TLAAGVNLPA+ V+I
Sbjct: 297 NEKEDLYNLVLRGVAYHHAGLSKGLRDIIESSFRDRILKVIVATPTLAAGVNLPARAVVI 356
Query: 289 RDSY------VG-RDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLR-FSSMMNA 340
D Y VG D I + YKQM GRAGR G E+GE++++ + ++ + + + +
Sbjct: 357 GDIYRYNRKVVGYMDLIPVMDYKQMSGRAGRPGFDENGEAVVVVRNKREAEKVYERYLMS 416
Query: 341 GPEPISSHMDPPT-LVDLILEVVAANLCSSLEDVKTLIKHTLFYQLKSPEDQQTFLETTL 399
EPI S + + ++ ++A+ + E++ +K TL + + + ++ L+ L
Sbjct: 417 DVEPIESKLGSESAFYSFLISIIASEGEKTTEELMEYVKETLLPKELAKKYFRSGLDWLL 476
Query: 400 SEIVASLLASKGTMLTMNEAGHLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLN 459
+ + ++ K ++LT + ++ + I L N+ C +
Sbjct: 477 QHDIFAEISDK-----------ITLTRFGRRISDLYINPFTAVTIREALEKNEKG-CEIA 524
Query: 460 SLHMLFLVIPLEYRIPSDGILLSRSKVYDRYTKFHPQTLRVAEALGVTENLVALNVTGKL 519
LH+ L Y I +SR AE + + L +
Sbjct: 525 YLHL------LAYTPDGPSIGVSR-----------------AEEDALIDELNCELFVDEP 561
Query: 520 KDEKKALLCRFFHAC----ILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYR 575
+DE + + A I+YD +N + + YGI + L+ ++ + Y
Sbjct: 562 EDEYE--FSNYISALKVAYIVYDWVNEIDEDTILGKYGIGSGDLRAIIDTMDWLTYSGYH 619
Query: 576 FCEELPELWCYKQLLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQL 622
L EL +K +L +L + P L L+ +PG+ RAR L
Sbjct: 620 VASVL-ELKDHKDILEELHARVKDGVKPELIELVKIPGIGRVRARLL 665
>gi|355571756|ref|ZP_09042984.1| ski2-type helicase [Methanolinea tarda NOBI-1]
gi|354825389|gb|EHF09619.1| ski2-type helicase [Methanolinea tarda NOBI-1]
Length = 725
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 124/447 (27%), Positives = 210/447 (46%), Gaps = 65/447 (14%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVK-GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQ 59
+ EKY+ A+ + G+ G + L + I + T EK LI + +
Sbjct: 79 LASEKYEDFARK--------QVRVGISTGDFDRRDENLGRNDIIVATSEKVDSLIRN--R 128
Query: 60 ENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFI 119
+ I I L+V+DE H+++EP RGP LE V++K+ +IQ+ A+SATIGN L+ ++
Sbjct: 129 AHWIPSITLLVVDEVHLIDEPHRGPTLEMVITKMRARNGNIQVIALSATIGNPGTLAGWL 188
Query: 120 EGITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGN 179
+ + RP + V + + + + + + + N D +L +L V
Sbjct: 189 DAEVVTGSWRPVDLRQGVYCNGAISFGRETRKVPPV-SKNEDINL-------LLDTVAEG 240
Query: 180 LMVLIFCSSK-------------IACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEEN 226
L+F +S+ + C++ P +EY + K+ + +E
Sbjct: 241 GQCLVFVASRRNAEAYARRAAAALKCTD----------PALEEYAARLKKAALTGNEE-- 288
Query: 227 DGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRV 286
+L C+ G A+HHA L+ R ++EE + G ++ I T TLAAG+NLPA+RV
Sbjct: 289 ------SLASCVALGAAFHHAGLSRESRAIVEEGFRKGLIRCIASTPTLAAGLNLPARRV 342
Query: 287 IIRD-----SYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSM-MNA 340
I+RD + G I Y QM GRAGR GL GE++++ + ++ +NA
Sbjct: 343 IVRDFRRFEAGQGMVPIPAREYHQMAGRAGRPGLDPYGEAVLIARDTEEARELEEFYINA 402
Query: 341 GPEPISSH-MDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLF-YQLKSPEDQQTFLETT 398
PE + S D L+ IL ++A+ + +D+ ++ T + YQ K + + LE
Sbjct: 403 SPEDVHSRCADESALITHILSLIASGFARTHDDLIRFLRRTFYHYQHK----KSSILEAV 458
Query: 399 LSEIVASLLASKGTMLTMNEAGHLSLT 425
+ + L K M+T N AG L+ T
Sbjct: 459 TKKSLDFL--GKAEMIT-NLAGQLAAT 482
>gi|413916520|gb|AFW56452.1| hypothetical protein ZEAMMB73_683344, partial [Zea mays]
Length = 384
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 107/334 (32%), Positives = 172/334 (51%), Gaps = 24/334 (7%)
Query: 124 YVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHL-----VQG 178
Y + RP E++ V ++F ++ + D+ G PD ++ L +QG
Sbjct: 52 YQTDFRPVPLEEFIKVGNQIFDK--DMNVVRVLPKVADHG--GKDPDHIVELCNEVVLQG 107
Query: 179 NLMVLIFCSSKIACSNLALRL-QFDRFP--GTKEYKKQ--EKEDLIEALKEENDGKLSTN 233
+ VL+FCSS+ C + A + +F + P GT + + + IEAL+ G L
Sbjct: 108 H-SVLLFCSSRKGCESTARHVAKFLKLPSVGTTDVSSEFSDAAAAIEALRRCPAG-LDPI 165
Query: 234 LEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYV 293
L E + +GVAYHHA LT ER ++E Y G ++++ TSTLAAGVNLPA+RVI R +
Sbjct: 166 LGETLPFGVAYHHAGLTVEEREIVESCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPKI 225
Query: 294 GRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHM--DP 351
GRDFI Y+QM GRAGRTG+ GESI++C+ ++ R + ++ + P+ S + D
Sbjct: 226 GRDFIDGTRYRQMAGRAGRTGIDTKGESILVCRP-EEVKRVTGIIRSNCPPLESCLSEDK 284
Query: 352 PTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQLKSPEDQQTFLETTLSEIVASLLASKG 411
+ I+EVVA + + D+ ++ TL + +D + +L L K
Sbjct: 285 NGMTHAIMEVVAGGIVQTANDIHRYVRCTLLNSTRPFDDVVKSAQDSL-----RWLCHKS 339
Query: 412 TMLTMNEAGHLSLTSIAKAAVQAGLSHDVCLIIY 445
+ +E S T + +AA + L+ + L+ Y
Sbjct: 340 FLEWNHETKIYSATPLGRAAFGSSLNPEESLVAY 373
>gi|88603707|ref|YP_503885.1| ski2-like helicase [Methanospirillum hungatei JF-1]
gi|88189169|gb|ABD42166.1| DEAD/DEAH box helicase-like protein [Methanospirillum hungatei
JF-1]
Length = 799
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 165/624 (26%), Positives = 277/624 (44%), Gaps = 65/624 (10%)
Query: 28 GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENR---IDEIGLIVIDEFHMLNEPQRGP 84
G T L + I + T EK L+ NR + +I IV+DE H++ RG
Sbjct: 100 GDLDRTDAYLGENDIIVATSEKTDSLL-----RNRTPWLSQITCIVLDEVHLIGSENRGA 154
Query: 85 ILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVF 144
LE V++K+ Y +QI +SATIGN L+ +++ RP VD R
Sbjct: 155 TLEMVITKLRYTNPVMQIIGLSATIGNPAQLAEWLDATLITSTWRP--------VDLRQG 206
Query: 145 QSFDGKSLTEIYADNLDYSLTGSGPDAVLHL----VQGNLMVLIFCSSKIACSNLALRLQ 200
++GK I + + + G L+L ++ L+F SS+ A +
Sbjct: 207 VYYNGK----IRFSDSERPIQGKTKHDDLNLCLDTIEEGGQCLVFVSSRRNAEGFAKKAA 262
Query: 201 FDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEA 260
G+ + K +E + L++ ++G + L +C+ G A+HHA L ER +IEE
Sbjct: 263 GALKAGSPDSKALAQE--LRRLRDRDEGNV---LADCVERGAAFHHAGLIRQERTIIEEG 317
Query: 261 YLAGTLQIICCTSTLAAGVNLPAQRVIIRD-----SYVGRDFISLNMYKQMVGRAGRTGL 315
+ G +++I T TLAAG+NLPA+RVIIRD S +G I + Y QM GRAGR L
Sbjct: 318 FRNGYIEVIAATPTLAAGLNLPARRVIIRDYNRFASGLGMVPIPVGEYHQMAGRAGRPHL 377
Query: 316 QESGESIMLCKTMQDFLR-FSSMMNAGPEPISSH-MDPPTLVDLILEVVAANLCSSLEDV 373
GE+++L K R F + ++A E + S +D +L IL ++A E +
Sbjct: 378 DPYGEAVLLAKDAPSVERLFETFIDAEAERVDSQCVDDASLCAHILSLIATGFAHDQEAL 437
Query: 374 KTLIKHTLFYQLKSPEDQQTFLETTLSEIVASLLASKGTMLTMNEAGHLSLTSIAKAAVQ 433
+ ++ T FY + P+ + +L +VA + T M E +L++ ++
Sbjct: 438 SSFMERT-FYFFQHPKTR------SLPRLVADAIRFL-TTAGMVEERENTLSATRLGSLV 489
Query: 434 AGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEYRIPSDGILLSRSKVYDRYTKF 493
+ L + C + L+ + L C +L L VI + + + + +++ +
Sbjct: 490 SRLYLNPC---TARLILDSLKSCKTPTLIGLLHVICVSPDMQRLYLKAADTQLLRTFLFK 546
Query: 494 HPQTLRVAEALGVTENLVALNVTGKLKDEKKALLCRFFHACILYDVLNFDNHQKVAKMYG 553
H L ++ L ++E++ L A +L D + + + + YG
Sbjct: 547 HKDDL-----------ILPLPFE---QEEEELWLSGLKTALVLTDWADEFSEGMIEERYG 592
Query: 554 IQNSHLQNFLNVTSYFASKVYRFCE-ELPELWCYKQLLTDLPQTLMYCRAPNLRALMDLP 612
I L N ++ + R E+PE+ Q++ L + + L L+ L
Sbjct: 593 IGAGDLYNIVDSGKWLLHGTERLVSVEMPEM---SQVVKTLSVRVHHGVKSELLPLVALR 649
Query: 613 GVKIGRARQLLNAGYSSLELIARA 636
+ RAR L NAGY E +ARA
Sbjct: 650 NIGRVRARTLYNAGYPDPEAVARA 673
>gi|448320771|ref|ZP_21510256.1| ski2-like helicase [Natronococcus amylolyticus DSM 10524]
gi|445605198|gb|ELY59128.1| ski2-like helicase [Natronococcus amylolyticus DSM 10524]
Length = 781
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 115/384 (29%), Positives = 193/384 (50%), Gaps = 27/384 (7%)
Query: 14 EEFKFYLEEYAGVK-----GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE--NRIDEI 66
EEF Y E GV G Y T L K I + T EK + SL++ + + E+
Sbjct: 86 EEFAAY--ESFGVDVGVTTGNYESTSDWLASKDIVVATSEK----VDSLVRNGASWLSEL 139
Query: 67 GLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVE 126
+V DE H++++ RGP LE ++K+ L +Q A+SAT+GN + ++ +++
Sbjct: 140 TCVVSDEVHLIDDRNRGPTLEVTLAKLRRLNPDLQTVALSATVGNADEIAAWLDAELVDT 199
Query: 127 NSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFC 186
+ RP V + +FD S E+ + + V +VQ L+F
Sbjct: 200 DWRPIDLQMGVHYGNAL--NFDDGSTREVPVEGSEKQEAA----LVRDIVQEGGSSLVFV 253
Query: 187 SSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHH 246
+S+ A RL + ++ E +L + ++E++D + ST+L +C+ G A+HH
Sbjct: 254 NSRRNAEAAARRLGQVTSRELTDGERDELAELADEIREDSDTETSTDLADCVERGSAFHH 313
Query: 247 ADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRD------SYVGRDFISL 300
A L++ +R L+E+A+ L++I T TLAAGVN PA+RVI+RD + G + +
Sbjct: 314 AGLSSTQRSLVEDAFRERLLKVISATPTLAAGVNTPARRVIVRDWRRFDPTAGGMAPLDV 373
Query: 301 NMYKQMVGRAGRTGLQESGESIMLCKTMQDFLR-FSSMMNAGPEPISSHMDP-PTLVDLI 358
QM+GRAGR GL GE+++L K+ + F + A PEP+ S + P L +
Sbjct: 374 LEVHQMMGRAGRPGLDPYGEAVLLAKSHDESEELFDRYIWAEPEPVRSKLAAEPALRTHV 433
Query: 359 LEVVAANLCSSLEDVKTLIKHTLF 382
L +A+ + E + ++ TL+
Sbjct: 434 LATIASGFARTREGLLEFLEATLY 457
>gi|428163597|gb|EKX32660.1| hypothetical protein GUITHDRAFT_166657 [Guillardia theta CCMP2712]
Length = 649
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 146/549 (26%), Positives = 253/549 (46%), Gaps = 107/549 (19%)
Query: 172 VLHLVQGNLMVLIFCSSKIACSNLALRLQFDRFPGTKEYK-KQEKEDLIEALKEEN-DGK 229
V +Q V+IFC++K + +A +L G ++ +Q + D+I AL+ N D
Sbjct: 151 VKEAIQDKAPVIIFCATKASTEIVAKQLTLAAITGAEDTGLQQARNDVISALRSANEDAN 210
Query: 230 LSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTL---------AAGVN 280
+L I GV++HH+ L++ ER++IE+AY +GT+ ++ T+TL AAGVN
Sbjct: 211 SDISLFAAISVGVSFHHSGLSSEERQIIEDAYKSGTISVLVATTTLVGIPEAVLHAAGVN 270
Query: 281 LPAQRVIIRDSYVGRDFISLNMYKQMVGRAGRTGL-QESGESIMLCKTMQDFLRFSSMMN 339
LPA RVI+R Y GR+F++ + +KQM GRAGR GL Q+ GE+ + + + R +++
Sbjct: 271 LPAGRVIVRTPYTGREFLTASRFKQMAGRAGRAGLGQKQGEAFLFVQPGERD-RCFALVT 329
Query: 340 AGPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQLKSPEDQQTFLETTL 399
GP+ + S + H F + +T +T+
Sbjct: 330 QGPKAVESQL----------------------------LHEAF------QYSRTRAQTSR 355
Query: 400 SEIVASLLASKGTMLTMNEAGHLSLTSIAKAAVQAGLSHDVCLIIYSDL-LHNKLNFCLL 458
E V+S A TS+ KA A ++ + L ++ DL L L+
Sbjct: 356 IEYVSSFYA----------------TSLGKATYLASIAVEDALALHHDLELARSEGIILV 399
Query: 459 NSLHMLFLVIPLE-YRIPSDGILLSRSKVYDRYTKFHPQTLRVAEALGVTENLVALNVTG 517
+ LH+L+L P+ R P+ +L D+ ++F +V + +G+ E+ V L+ G
Sbjct: 400 DQLHLLYLTAPVSGLREPNWSLL------ADKISQFDDNRKKVLQRIGIEESFVCLSAQG 453
Query: 518 KL------KDEKKALLCRFFHACILYDVLNFDNHQKVAKMYG----------------IQ 555
+L +E+ R + A +L +++ + ++YG I
Sbjct: 454 RLLKRTPRLEEQDFKSRRLWVALLLQELVEEKPVAAILRVYGAGKDRDGVGSAPGSVAID 513
Query: 556 NSHLQNFLNVTSYFASKVYRFCEELPELWCYKQLLTDLPQTLMYCRAPNLRA----LMDL 611
+++ VT+ FAS V +F + + L L Q+L A R+ L D+
Sbjct: 514 KGYIEELQTVTASFASMVAQFSRNVG-----FEDLASLIQSLTGRIANGARSDVLPLCDI 568
Query: 612 PGVKIGRARQLLNAGYSSLELIARADAKEMVAKIRHL----PLRSARNLI-SAAKLHFIT 666
P V+ RAR++ G ++E +A A +E+V + +L L A+ +I SA LH
Sbjct: 569 PFVQAKRAREMFRNGLRTVEDVASAKPQELVRMLGNLLGPTGLAMAKKIIQSAQNLHRKR 628
Query: 667 KMDKVEAMK 675
M+ + M+
Sbjct: 629 LMELSQGME 637
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 45/87 (51%), Gaps = 3/87 (3%)
Query: 42 IYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQ 101
I I TIEK ++I LI+E+R+ E+ L+V+DE H + E L +V + + K +
Sbjct: 106 ICIATIEKADRIIKELIEESRMSELSLVVVDEAHFVAEKDH---LAFLVKEAIQDKAPVI 162
Query: 102 IFAMSATIGNINALSTFIEGITYVENS 128
IF + I A + IT E++
Sbjct: 163 IFCATKASTEIVAKQLTLAAITGAEDT 189
>gi|386002437|ref|YP_005920736.1| Putative Ski2-type helicase [Methanosaeta harundinacea 6Ac]
gi|357210493|gb|AET65113.1| Putative Ski2-type helicase [Methanosaeta harundinacea 6Ac]
Length = 717
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 154/620 (24%), Positives = 271/620 (43%), Gaps = 70/620 (11%)
Query: 37 LNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYL 96
L + I + T EK LI + I ++ ++V+DE H+L+ P RGP LE ++K+L L
Sbjct: 122 LGRNHIIVATSEKADSLIRN--GARWIRDLSVLVVDEIHLLDSPNRGPTLEMTITKLLRL 179
Query: 97 KKSIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIY 156
+QI +SAT+ N ++ +++ RP + E V D + + L+
Sbjct: 180 NPQMQILGLSATVANAREVAAWLKAELVESRWRPVELKEGVICDGVLHFPGEEVPLSRRR 239
Query: 157 ADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRLQ---FDRFPGTKEYKKQ 213
D +D V + +LIF SS+ A +L + G +
Sbjct: 240 DDLIDL---------VKDTIGEGGQILIFDSSRRNAEATATKLAKVVAEAIEGKAASRLS 290
Query: 214 EKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTS 273
EK + D + L +C+ GVA+HHA L A +R ++E + +G+++ I T
Sbjct: 291 EK------ILATGDTETGRRLADCVRSGVAFHHAGLLAEQRAVVEGGFRSGSIKAIASTP 344
Query: 274 TLAAGVNLPAQRVIIRD--SYVG-RDFISLNM--YKQMVGRAGRTGLQESGESIMLCKT- 327
TLAAG+NLPA+RV+I+ Y G R + + + Y+QM GRAGR GL GE++++ K
Sbjct: 345 TLAAGLNLPARRVLIKSYRRYEGSRGMVPIPVMEYRQMAGRAGRPGLDPRGEALLMAKNE 404
Query: 328 --MQDFLRFSSMMNAGPEPISSHMD-PPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQ 384
++D L + PE I S + P L +L VA E++K + T +
Sbjct: 405 AEVRDLLDHYVLGE--PEEIFSKLAMEPALRTHLLSTVATGFAKDEEELKRFVDSTFY-- 460
Query: 385 LKSPEDQQTFLETTLSEIVASLLASKGTMLTMNEAGHLSLTSIAKAAVQAGLSHDVCLII 444
+ + + LE T+ ++ L+ +G ML + L T + + + + I+
Sbjct: 461 --ASQQEAWHLEATMERVLEFLI--EGGMLEAD----LRPTPLGELVSRLYIDPLSARIV 512
Query: 445 YSDL-LHNKLNFCLLNSLHMLFLVIPLEYRIPSDGILLSRSKVYDRYTKFHPQTLRVAEA 503
+L K L LHM+ + ++ TL V +
Sbjct: 513 VENLRAKEKTKITDLTLLHMITMTPDMD-------------------------TLYVQSS 547
Query: 504 LGVTENLVALNVTGKLKDEKKALLCRFFH-ACILYDVLNFDNHQKVAKMYGIQNSHLQNF 562
G E+ + + ++E + R A +L + ++ +++A + + ++
Sbjct: 548 DGWVEDFIDEHACELCREENYDWMMREAKTAALLLEWISESEEERIADRFRVGPGDIRRV 607
Query: 563 LNVTSYFASKVYRFCEELPELWCYKQLLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQL 622
+ R E L ++ + L + + Y P+L L+DL GV RAR+L
Sbjct: 608 AETAEWLIHSAGRLSEHLDLGATFR--IYQLEKRVHYGAGPDLLGLLDLKGVGRVRARKL 665
Query: 623 LNAGYSSLELIARADAKEMV 642
AGY+S+E + A A ++
Sbjct: 666 HRAGYTSIERLKEAKAADLA 685
>gi|340519993|gb|EGR50230.1| predicted protein [Trichoderma reesei QM6a]
Length = 907
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 161/636 (25%), Positives = 274/636 (43%), Gaps = 88/636 (13%)
Query: 42 IYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQ 101
I ICT+EK + +V+DE HM+++ RG +LE + +K+L L++ IQ
Sbjct: 274 IGICTLEK----------------LRAVVLDELHMIDDDHRGYLLELIATKLLSLEQPIQ 317
Query: 102 IFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVF----------------Q 145
I MSAT+ N N ++ ++ +Y RP E++ + +V+ +
Sbjct: 318 IIGMSATLPNANLVAQWLNAHSYETRYRPIPIEEHLVCEGKVYHIGTNGATAHKHIKVEE 377
Query: 146 SFDGKSLTEIYADNLDY-SLTGSGPDAVLHLVQGNLMV----LIFCSSKIACSNLALRLQ 200
G+ + + + D+ +AV+ L M+ LIF S+ C + A RL
Sbjct: 378 ISQGQVIPTRHIEASDHKEFRDPVLNAVVSLAYETAMMGYGSLIFAGSRSICESDA-RLI 436
Query: 201 FDRFPGTKEYKK---QEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLI 257
P + ++ DL+ L+ + G LEE +L GVA+H L ER LI
Sbjct: 437 SRVMPQPHDLDSATMDKRMDLLSELRSLSTGA-DPVLEETVLSGVAFHRTSLAFEERDLI 495
Query: 258 EEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGRDFISLNMYKQMVGRAGRTGLQE 317
EA PA+RVI+ ++ +GR+++ +M +QM GRAGR G
Sbjct: 496 AEA---------------------PARRVILHNARMGREYVGPSMLRQMRGRAGRQGKSP 534
Query: 318 SGESIMLCKTMQDFLRFSSMMNAGPEPISS--HMDPPTLVDLILEVVAANLCSSLEDVKT 375
GE+ + C+ D + +M A I+S + + + ILEV++ L +S + +
Sbjct: 535 VGETYLCCR-QDDLEQVLDLMYADIPEIASCLNTENKRVQRAILEVISVRLANSHDSLLD 593
Query: 376 LIKHTLFYQLKSPEDQQTFLETTLSEIVASLLASKGTMLTMNEA-GHLSLTSIAKAAVQA 434
+L E +T L + L EI L +N++ + T + +A V +
Sbjct: 594 YFSKSLISYTHDREFVETCLRSGLEEI-------HDLGLIVNDSYSSFTATQLGRAIVAS 646
Query: 435 GLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEYRIPSDGILLSRSKVYDRYTKFH 494
+ + I+++L F + +H+L++ P++ GI+++ +
Sbjct: 647 SVDPYDGVFIHAELTKTLKAFVMDGEMHILYVFTPVQ----DFGIVVNWQVFRNEMDALD 702
Query: 495 PQTLRVAEALGV--TENL-----VALNVTGKLKDEKKALLCRFFHACILYDVLNFDNHQK 547
LRV LG+ T+ L V L + + E + RF+ A L D+ N
Sbjct: 703 ESGLRVLRFLGIKPTDVLKFARGVPLKESTPEEKELARVYRRFYLALQLRDLCNEMPIHV 762
Query: 548 VAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELW-CYKQLLTDLPQTLMYCRAPNLR 606
VA+ Y +Q FA+ + +FCE++ W L LM +L
Sbjct: 763 VARKYDSPRGSVQTLAQTCQGFAAGMIKFCEQMG--WGVMAAALEHFSDRLMAGARTDLL 820
Query: 607 ALMDLPGVKIGRARQLLNAGYSSLELIARADAKEMV 642
AL +P +K AR GY ++ IA AD KE+V
Sbjct: 821 ALAKIPFIKSRTARVFWENGYRTVGAIANADPKELV 856
>gi|337284276|ref|YP_004623750.1| ski2-like helicase [Pyrococcus yayanosii CH1]
gi|334900210|gb|AEH24478.1| ski2-like helicase [Pyrococcus yayanosii CH1]
Length = 712
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 173/659 (26%), Positives = 285/659 (43%), Gaps = 78/659 (11%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVK-----GQYPPTKRQLNKKSIYICTIEKGSKLIG 55
+ EKY+ EFK + E G++ G Y + L + I + T EK L+
Sbjct: 80 LAEEKYR-------EFKVW--EALGLRVAVTTGDYDRKEEWLGRYDIIVATAEKFDSLLR 130
Query: 56 SLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINAL 115
+ E+GL+V DE H++ P RG LE +++ +L QI +SAT+GN L
Sbjct: 131 H--GPGWLREVGLLVADEIHLIGSPDRGTTLEMILTHML---GKAQIIGLSATVGNPEEL 185
Query: 116 STFIEGITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHL 175
+ ++ V + RP + + V D + + DG E Y + SLT +
Sbjct: 186 AEWLGARLVVSDWRPVRLRKGVFYDG-IVRWEDGG--VEKYPTGWE-SLT-------VDA 234
Query: 176 VQGNLMVLIFCSSKIACSNLALRLQFDRFPGTKEYK----KQEKEDLIEALKEENDGKLS 231
V+ L+F +++ + +A+ L +K+ K K E +L + E D +
Sbjct: 235 VKKGKGALVFVNTRRSAERVAVEL-------SKKMKRLLTKPELRELEKLAGELEDNPTN 287
Query: 232 TNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS 291
L E + GVA+HHA L ER L+E+A+ AG ++++ T TL+AGVN+PA RV+IRD+
Sbjct: 288 KRLREALRGGVAFHHAGLGREERLLVEDAFRAGRIKVVVATPTLSAGVNMPAFRVVIRDT 347
Query: 292 YVGRDF----ISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISS 347
DF I + +QM+GRAGR E GE+I++ K + PE + S
Sbjct: 348 KRYSDFGWTDIPVLEIQQMMGRAGRPKYDERGEAIIVAKDEDPEALMKRYIFGKPEKLFS 407
Query: 348 HM-DPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFY-QLKSPEDQQTFLETTLSEIVAS 405
+ + T +L ++ + S + ++ T +Y Q +S E LE +V
Sbjct: 408 MLSNESTFRGQVLALIVSFNVRSFRSLMEFLERTFYYHQRRSLEA----LEERAKGVVYF 463
Query: 406 LLASKGTMLTMNEAGHLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLF 465
LL ++ + MN G + + Q + + L + L H+L
Sbjct: 464 LLENE--FIEMNLEGGFTPLPLGIRTAQLYVDPLTAKLFKDHLEDIEKGPNPLGVFHLLA 521
Query: 466 LVIPLEYRIPSDGILLSRSKVYDRYTKFHPQTLRVAEALGVTENL-VALNVTGKLKDEKK 524
L P L R K + + + A + E L V + G E +
Sbjct: 522 LT-------PDMPPLPVRRKEFSDWVDY---------AYEMEEYLYVEIPWDGY---EME 562
Query: 525 ALLCRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCE--ELPE 582
L A +L D +N K+ + YGI+ L + + + VY E +
Sbjct: 563 KFLRALKTAKLLLDWINEVPEAKIMENYGIEPGDLHRLVELADWL---VYSMAEVARVLG 619
Query: 583 LWCYKQLLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIARADAKEM 641
+ + L DL + + L L+ LP + RAR L NAG+ +LE IA+A +++
Sbjct: 620 MENSAKYLRDLQLRVRHGVREELLPLVKLPMIGRKRARALYNAGFKTLEDIAKARPEDI 678
>gi|154413466|ref|XP_001579763.1| DEAD/DEAH box helicase family protein [Trichomonas vaginalis G3]
gi|121913973|gb|EAY18777.1| DEAD/DEAH box helicase family protein [Trichomonas vaginalis G3]
Length = 857
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 161/646 (24%), Positives = 292/646 (45%), Gaps = 79/646 (12%)
Query: 41 SIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSI 100
SI ICT EK L ++ D+I LI+IDE HM+ + RG ++E ++ K+ L K
Sbjct: 157 SIAICTYEKAHSLFNQAVKFGYFDQIKLIIIDEIHMIGDDNRGIVVESLLMKLRMLPKKP 216
Query: 101 QIFAMSATIGNINA--LSTFIEGITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYAD 158
+I +SAT+ I+A +S I+G + R + Y++ + ++F+ D ++ I +
Sbjct: 217 RIICLSATVNKIDAIKISMVIDGYFTICEQRTQELRYYISFEGKLFRIKDSEASKIITNN 276
Query: 159 NLDYSLTGSGPDAVLHLV------QGNLMVLIFCSSKIACSNLALRL--QFDR-FPGTKE 209
++ S D +L L+ + LIF +++ + +AL + D+ PG +E
Sbjct: 277 SIK-----SDNDKILPLIKPLIARKNGQSCLIFVNTRNESNRIALFISQNIDKEIPGCEE 331
Query: 210 YKKQEKEDLIEALKE--ENDGKLSTNLEE----CILYGVAYHHADLTAGERRLIEEAYLA 263
K + E +IE ++ K ST L++ CI+ G+ YHHA L ER+++E+ +
Sbjct: 332 ISK-DNEKIIEGREKLISELAKCSTGLDKCLGGCIMKGIGYHHAGLLLEERKIVEKGIKS 390
Query: 264 GTLQIICCTSTLAAGVNLPA-QRVIIRDSYVGRD----FISLNMYKQMVGRAGRTGLQES 318
G + II T+TL+AG+N+ + RVI+ + Y D IS ++ +QM GR+GRT S
Sbjct: 391 GLINIIVATTTLSAGINISSVSRVIVYNPYRKSDNKKTIISPSLLQQMAGRSGRTDTT-S 449
Query: 319 GESIMLCKTMQDFLRFSSMMNAGPEPISSHM-DPPTLVDLILEVVAANLCSSLEDVKTLI 377
G+ I++ ++ +F + N I+S++ + +L+ +A L + + +
Sbjct: 450 GDVIVIARSSYEFNEIIKLYNTPIPCITSNIVKGGDMNSYLLQTLALRLSNGPFTMNEFL 509
Query: 378 KHTLFYQL-------------------KSPEDQQTFL--ETTLSEIVASLLASKGTM--- 413
K++ +Q+ K+P+ + + E E ++ SK +
Sbjct: 510 KNSFAFQIVSTNEYNLSKILNQKDSKKKNPKSDKIDVLNENNSDEEKNNVERSKAIVNDC 569
Query: 414 ---LTMN---EAGHLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLV 467
L N E T + KA + LS L + + CL +SLH+L+L
Sbjct: 570 LKYLVDNNLVEDKTYEATKLGKAITSSNLSISEGLRLNEAVKKIMKMLCLSDSLHLLYLC 629
Query: 468 IPLEYRI--------PSDGILLSRSKVYDRYTKFHPQTLRVAEALGVTENLVALNVTG-K 518
IP + I + I L S V + T + LR ++ + G K
Sbjct: 630 IPNQTGIYLPPFTDNTWETIFLKHSHVINLITDKTQEDLR---------RMIIQSFNGKK 680
Query: 519 LKDEKKALLCRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCE 578
L + +L R + C+L +++ + ++ M+ I +Q + +A + +FCE
Sbjct: 681 LSQSEMSLFERIYAGCVLEKLIDEHSIVEIESMFKIDRGTIQILQTSSGSYAGQATKFCE 740
Query: 579 ELPELWCYKQLLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLN 624
E+ + L + L + L LM++P + AR L N
Sbjct: 741 EM-DYSILAAALVRFRKRLEFGVKDELIELMEIPSITREIARDLYN 785
>gi|374327790|ref|YP_005085990.1| ATP-dependent, DNA binding helicase [Pyrobaculum sp. 1860]
gi|356643059|gb|AET33738.1| ATP-dependent, DNA binding helicase [Pyrobaculum sp. 1860]
Length = 715
Score = 153 bits (386), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 110/395 (27%), Positives = 192/395 (48%), Gaps = 30/395 (7%)
Query: 28 GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILE 87
G + ++L + + + T EK L+ + + + +G++V+DE H L +P+RGP+LE
Sbjct: 111 GDFESDDKRLYEYDVVVVTYEKLDSLLRH--RPSWLSSVGVVVVDEIHYLGDPKRGPVLE 168
Query: 88 CVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSF 147
++++V +L Q +SAT+GN ++ ++ + RP E V +++
Sbjct: 169 SIIAEVRHLGLKTQFIGLSATVGNAGDVARWLGARLVASSWRPVPLREGVYHGGKIY--- 225
Query: 148 DGKSLTEIYADNLDYSLTGSGPDAVLHL----VQGNLMVLIFCSSKIACSNLALRLQFDR 203
+ D ++ G+G +A + L V LIF SS+ + +A +
Sbjct: 226 --------FPDGGQRAVGGAGGEAEVALAIDAVASGGQALIFTSSRSSTVRIAKAVARAV 277
Query: 204 F--PGTKEYKKQEKEDLIEALKEENDGKL-STNLEECILYGVAYHHADLTAGERRLIEEA 260
P TK E + L A+ + K+ L E + GVA+H+A L RRL+EE
Sbjct: 278 AAHP-TKLIDVGEAQALAGAVLGASTSKIIGRELAELVARGVAFHNAGLELEVRRLVEEG 336
Query: 261 YLAGTLQIICCTSTLAAGVNLPAQRVIIR-----DSYVGRDFISLNMYKQMVGRAGRTGL 315
+ G +++I T+TLAAGVNLPA+RV++ D VGR+ I + Y+QM GRAGR GL
Sbjct: 337 FRRGVIKVIVSTTTLAAGVNLPARRVVVADYERFDPAVGREEIPVLEYRQMAGRAGRPGL 396
Query: 316 QESGESIMLCKTMQ--DFLRFSSMMNAGPEPISSH-MDPPTLVDLILEVVAANLCSSLED 372
GE++++ ++ D+L + E + SH + P L L V +++D
Sbjct: 397 DPYGEAVIVARSRGEVDYL-MERYVRGRVEDVKSHILSGPNLRAHALGAVGGGYARTIDD 455
Query: 373 VKTLIKHTLFYQLKSPEDQQTFLETTLSEIVASLL 407
+ +TL Y + L + +++ V L+
Sbjct: 456 LVDFFSNTLGYHQVKTSLKSALLRSKVADAVDELV 490
>gi|448679825|ref|ZP_21690370.1| ski2-like helicase [Haloarcula argentinensis DSM 12282]
gi|445769984|gb|EMA21053.1| ski2-like helicase [Haloarcula argentinensis DSM 12282]
Length = 800
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 122/425 (28%), Positives = 209/425 (49%), Gaps = 26/425 (6%)
Query: 14 EEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENR--IDEIGLIVI 71
EEF+ Y + G Y L K I + T EK + SL++ + I+++ +V
Sbjct: 89 EEFEQYGLDIGVSTGNYESEGGWLADKDIVVATSEK----VDSLVRNDAPWIEDLTCVVT 144
Query: 72 DEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVENSRPT 131
DE H++++ +RGP LE ++K+ L +Q A+SATIGN AL+T+++ + RP
Sbjct: 145 DEVHLVDDGERGPTLEVTLAKLRRLNPDLQTVALSATIGNAEALATWLDAGLVDSDWRPI 204
Query: 132 KHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIA 191
+ + V + + + S + N + V ++ + L+F +S+
Sbjct: 205 ELQKGVHYGQALH--LEDGSQQRLSVQNNEKQTAA----IVRDTLEDDGSTLVFVNSRRN 258
Query: 192 CSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTA 251
A RL P ++ + D+ E +++ +D + S L + + G A+HHA L+
Sbjct: 259 AEAAAGRLANTVRPHLSTEERDQLADIAEEIRDVSDTETSDELADAVADGAAFHHAGLSR 318
Query: 252 GERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIR------DSYVGRDFISLNMYKQ 305
G R L+EEA+ ++++C T TLAAGVN P++RV++R S G +S+ Q
Sbjct: 319 GHRELVEEAFRDRLVKVVCATPTLAAGVNTPSRRVVVRDWRRYDGSAGGMAPLSVLEVHQ 378
Query: 306 MVGRAGRTGLQESGESIMLCKTMQDFLR-FSSMMNAGPEPISSHMDP-PTLVDLILEVVA 363
M+GRAGR GL GE++++ + + F + A PEP+ S + P L IL VA
Sbjct: 379 MMGRAGRPGLDPYGEAVLIASSHDEVDELFERYVWADPEPVRSKLAAEPALRTHILATVA 438
Query: 364 ANLCSSLEDVKTLIKHTLFYQLKSPEDQQTFLETTLSEIVASLLASKGTMLTMNEAGHLS 423
+ S E + ++ TL+ S D + LE + +++ L + L + EAG L
Sbjct: 439 SGFARSREGLLEFLEQTLY---ASQTDDSSQLERVVDDVLTYL--QRNDFLEI-EAGELD 492
Query: 424 LTSIA 428
TS+
Sbjct: 493 ATSLG 497
>gi|115388473|ref|XP_001211742.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114195826|gb|EAU37526.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 528
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 133/503 (26%), Positives = 226/503 (44%), Gaps = 33/503 (6%)
Query: 182 VLIFCSSKIACSNLALRLQFDRFPGTKEYKKQE---KEDLIEALKEENDGKLSTNLEECI 238
L+FC S+ C A + + P +E + DL+ L+ G L LE +
Sbjct: 15 ALVFCGSRQGCQIHASTIS-EAMPAQSAVDPEELVKRLDLLAELRSLPSG-LDPVLETTL 72
Query: 239 LYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGRDFI 298
+ GV +HHA +T ER LI +AY G L+++ T +LAAGVNLPA+RVII + +GR+ +
Sbjct: 73 VKGVGFHHAGMTTEERELIAQAYDQGALKVLVATCSLAAGVNLPARRVIINGARMGRELV 132
Query: 299 SLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPT--LVD 356
M +QM GRAGR G E GE+ ++C D ++ A I S + P L
Sbjct: 133 GPAMLRQMCGRAGRKGKDEVGETYLICGK-SDLQAVCDLLEADMPAIESCLAPEKRGLKR 191
Query: 357 LILEVVAANLCSSLEDVKTLIKHTLFYQLKSPEDQQTFLETTLSEIVASLLASKGTMLTM 416
+LE +A L S + +K +K TL Y+ + + + + L E++ L L
Sbjct: 192 ALLEAIATGLVSGYDAIKEYVKCTLLYRTMDKKIAYSIMHSALEELINEKL------LRQ 245
Query: 417 NEAGHLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEYRIPS 476
N+ T + +A V + + + L ++ +L F + +H+ ++ PL+ + +
Sbjct: 246 NDDESYGATQLGQAVVASAFAPEDGLFVHEELSRALQAFVMDGEMHIFYMFTPLQMAMNT 305
Query: 477 --DGILLSRSKVYDRYTKFHPQTLRVAEALGVTENLVALNVT--GKLKDE--KKALLCRF 530
D ++ D+ + LR + +GV V V LK+ ++ L R
Sbjct: 306 QIDWLVFR-----DQLDELDESGLRALQFVGVQPGFVNTMVQSGASLKESTPEQVKLARI 360
Query: 531 FH----ACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELW-C 585
+ A L D+ N +A Y I +Q FA+ + +FC+ + W
Sbjct: 361 YRRAYTAFQLRDLSNEVPLSVIANRYRIPRGAIQTLAQQCHGFAAGMVKFCQRMG--WGM 418
Query: 586 YKQLLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIARADAKEMVAKI 645
+L + L +L + + VK AR L G+ +L +A ADAK++V +
Sbjct: 419 LAAVLDHMRDRLEAGARADLLEMAQVTYVKGWTARLLRENGFRNLRALAEADAKDLVPVL 478
Query: 646 RHL-PLRSARNLISAAKLHFITK 667
P+++ +N + A +K
Sbjct: 479 MMANPVKAQKNQLDPADAERYSK 501
>gi|448346938|ref|ZP_21535817.1| ski2-like helicase [Natrinema altunense JCM 12890]
gi|445631275|gb|ELY84507.1| ski2-like helicase [Natrinema altunense JCM 12890]
Length = 789
Score = 152 bits (385), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 157/645 (24%), Positives = 292/645 (45%), Gaps = 58/645 (8%)
Query: 14 EEFKFYLEEYAGVK-----GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE--NRIDEI 66
+EF+ Y E GV G Y T L K I + T EK + SL++ + + ++
Sbjct: 86 DEFEAY--ERFGVTVGVTTGNYESTSDWLATKDIVVATSEK----VDSLVRNGADWLSDL 139
Query: 67 GLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVE 126
+V DE H++++ RGP LE ++K+ L +Q+ A+SAT+GN + ++ +++
Sbjct: 140 TCVVSDEVHLIDDRNRGPTLEVTLAKLRKLNPRMQLVALSATVGNADEIADWLDAALVDT 199
Query: 127 NSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFC 186
+ RP + V + +FD S E+ + V +++ + L+F
Sbjct: 200 DWRPIELQMGVHYGNAL--NFDDGSTREVPVQGSEKQEAA----LVRDILREDGSSLVFV 253
Query: 187 SSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIE---ALKEENDGKLSTNLEECILYGVA 243
+S+ A RL T E +E+ +L E +++++D + S +L + +G A
Sbjct: 254 NSRQNAEAAARRLGD---VSTNELTPEERTELAELADEIRDDSDTETSKDLAAAVEHGAA 310
Query: 244 YHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRD------SYVGRDF 297
+HHA L++ +R ++E+A+ L++I T TLAAGVN PA+RVI+RD S G
Sbjct: 311 FHHAGLSSTQRSIVEDAFRDRLLKVISATPTLAAGVNTPARRVIVRDWRRFDPSAGGMAP 370
Query: 298 ISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLR-FSSMMNAGPEPISSHMDP-PTLV 355
+ + QM+GRAGR GL GE+++L K + F + A PEP+ S + P L
Sbjct: 371 LDVLEVHQMMGRAGRPGLDPYGEAVLLAKNHDESEDLFDRYIWAEPEPVRSKLAAEPALR 430
Query: 356 DLILEVVAANLCSSLEDVKTLIKHTLF-YQLKSPEDQQTFLETTLSEIVASLLASKGTML 414
+L +A+ + +++ ++ TL+ Q P +T +T L + ++ + +
Sbjct: 431 THVLATIASGFARTRDELLEFLEATLYASQSSEPGRLETVTDTVLQYLESNDFIERESGG 490
Query: 415 TMNEAGHLSLTSIAKAAVQAGLSHDVCLIIYSDLLH--NKLNFCLLNSLHMLFLVIPLEY 472
+ + G + AA+ S D L S L H ++L +++ ++ + +
Sbjct: 491 SDDSEGVDDGAFTSAAALADDGSRDEELAATS-LGHTVSRLYLDPMSAAEIVHGLADADE 549
Query: 473 RIPSDGI--LLSRS-KVYDRYTKFHPQTL-------RVAEALGVTENLVALNVTGKLKDE 522
R + G+ L+SR+ +Y+ Y + R AE LG N + ++E
Sbjct: 550 RPTALGLYQLISRTPDMYELYLRSGEDERFGDLFYERGAELLG--------NAPSEFEEE 601
Query: 523 K-KALLCRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELP 581
+ + L +L D + +++ Y I L+ ++ + E+
Sbjct: 602 RFEDWLSALKTGKLLEDWATETDEEQLTDRYKIGPGDLRGKVDTAEWLLGAAESLAAEID 661
Query: 582 ELWCYKQLLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAG 626
W + + + + L L+ + GV RAR+L +AG
Sbjct: 662 SEWTVA--VREARARVEHGVGEELLELVGVGGVGRKRARRLYDAG 704
>gi|289581631|ref|YP_003480097.1| DEAD/DEAH box helicase [Natrialba magadii ATCC 43099]
gi|448282961|ref|ZP_21474241.1| ski2-like helicase [Natrialba magadii ATCC 43099]
gi|289531184|gb|ADD05535.1| DEAD/DEAH box helicase domain protein [Natrialba magadii ATCC
43099]
gi|445575019|gb|ELY29503.1| ski2-like helicase [Natrialba magadii ATCC 43099]
Length = 799
Score = 152 bits (384), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 171/662 (25%), Positives = 295/662 (44%), Gaps = 62/662 (9%)
Query: 15 EFKFYLEEYA---GVK-GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE--NRIDEIGL 68
EF Y EE+ GV G Y T L K I + T EK + SL++ + + ++
Sbjct: 87 EFDAY-EEFGVTTGVATGNYESTSEWLATKDIIVATSEK----VDSLVRNGADWLSDLTC 141
Query: 69 IVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVENS 128
+V DE H++++ RGP LE ++K+ L +Q+ A+SAT+GN + L+ +++ +
Sbjct: 142 VVSDEVHLIDDRNRGPTLEVTLAKLRRLNPQLQVVALSATVGNADELADWLDAELVDTDW 201
Query: 129 RPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVL--HLVQGNLMVLIFC 186
RP V + +FD E+ + G +A L ++Q L+F
Sbjct: 202 RPIDLQMGVHYGNAL--NFDDGETREVPVE------AGEKQEAALVRDILQEGGSSLVFV 253
Query: 187 SSKIACSNLALRL-QFDRFPGTKEYKKQEKEDLIE---ALKEENDGKLSTNLEECILYGV 242
+S+ A RL Q ++E E+ DL ++E++D + S +L +C+ G
Sbjct: 254 NSRRNAEAAARRLGQV----SSRELTAGEQNDLAALATEIREDSDTETSQDLADCVERGA 309
Query: 243 AYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRD------SYVGRD 296
A+HHA L++ +R L+E+A+ L++I T TLAAGVN PA+RVI+RD S G
Sbjct: 310 AFHHAGLSSTQRSLVEDAFRDRLLKVISATPTLAAGVNTPARRVIVRDWRRFDPSAGGMA 369
Query: 297 FISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLR-FSSMMNAGPEPISSHMDP-PTL 354
+ + QM+GRAGR GL GE+++L K+ + F + A PEP+ S + P L
Sbjct: 370 PLDVLEVHQMMGRAGRPGLDPYGEAVLLAKSHDESQELFDRYVWADPEPVRSKLAAEPAL 429
Query: 355 VDLILEVVAANLCSSLEDVKTLIKHTLFYQLKSPEDQQTFLETTLSEIVASL------LA 408
+L +A+ + E + ++ TL+ S + LE ++++ L
Sbjct: 430 RTHVLATIASGFARTREGLLEFLEATLYASQSS---EGGRLERVTDDVLSYLERNDFIER 486
Query: 409 SKGTMLTMN-EAGHLS-LTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCL----LNSLH 462
S G T+N EA S TS A A G DL L + L+ +
Sbjct: 487 SGGPEDTLNSEADAASAFTSAADLADSDGGDSGGTTGQEEDLEATSLGHTVSRLYLDPMS 546
Query: 463 MLFLVIPLE---YRIPSDGI--LLSRS-KVYDRYTKFHPQTLRVAEALGVTENLVALNVT 516
+V LE R + G+ L+SR+ +Y+ Y + + + E E + +
Sbjct: 547 AAEIVHGLEDADERPTALGLYQLVSRTPDMYELYLR-SGEDEKFGELYYERERELLGDAP 605
Query: 517 GKLKDEK-KALLCRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYR 575
+ ++E+ + L +L D D+ +++ + Y I L+ ++ +
Sbjct: 606 SEFEEERFEDWLAALKTGKLLEDWATEDDEEQITERYKIGPGDLRGKVDTAEWLLGAAES 665
Query: 576 FCEELPELWCYKQLLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIAR 635
E+ W + + + + L L+ + G+ RAR+L AG +
Sbjct: 666 LASEIDSEWAVA--VREARARVEHGVGEELLELVSVSGIGRKRARRLYAAGIEEPAALRS 723
Query: 636 AD 637
AD
Sbjct: 724 AD 725
>gi|300709521|ref|YP_003735335.1| ski2-like helicase [Halalkalicoccus jeotgali B3]
gi|448297709|ref|ZP_21487752.1| ski2-like helicase [Halalkalicoccus jeotgali B3]
gi|299123204|gb|ADJ13543.1| ski2-like helicase [Halalkalicoccus jeotgali B3]
gi|445578579|gb|ELY32982.1| ski2-like helicase [Halalkalicoccus jeotgali B3]
Length = 763
Score = 152 bits (383), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 163/653 (24%), Positives = 290/653 (44%), Gaps = 73/653 (11%)
Query: 28 GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE--NRIDEIGLIVIDEFHMLNEPQRGPI 85
G Y + L+ + I + T EK + SL++ + I+E+ +V DE H++++ RGP
Sbjct: 103 GNYDSDEEWLSNRDIVVATSEK----VDSLVRNGASWIEELSCVVADEIHLVDDANRGPT 158
Query: 86 LECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQ 145
LE ++K+ L +++Q A+SAT+GN + ++ +++ HSE+ +D +
Sbjct: 159 LEVTLAKLRQLNRALQTVALSATVGNASEIAEWLDAELV--------HSEWRPIDLKTGV 210
Query: 146 SFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNL----MVLIFCSSKIACSNLALRLQF 201
+ G +L ++++ SG + LV L L+F +S+ A RL
Sbjct: 211 HY-GSALHFDDGSQEEFAIE-SGENPTTALVSAALEDGGSSLVFVNSRRNAEAAARRLGN 268
Query: 202 DRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAY 261
+ ++ E +L E ++ +D + S +L + I G A+HHA LT R L+E+A+
Sbjct: 269 AVEDHLTDAERTELAELAEEVRGVSDSETSDDLADAIANGAAFHHAGLTREHRTLVEDAF 328
Query: 262 LAGTLQIICCTSTLAAGVNLPAQRVIIRD--SYVG-----RDFISLNMYKQMVGRAGRTG 314
++ I T TLAAGVN P++RVI+RD Y G + +L ++ QM+GRAGR G
Sbjct: 329 RDRLIKAISATPTLAAGVNTPSRRVIVRDWQRYDGDAGGMKPLATLEVH-QMMGRAGRPG 387
Query: 315 LQESGESIMLCKTMQDFLR-FSSMMNAGPEPISSHM-DPPTLVDLILEVVAANLCSSLED 372
L GE+++L + F + A PEP+ S + P L IL VA+ +S
Sbjct: 388 LDPYGEALLLANNHDELDELFERYVWADPEPVRSKLATEPALRTHILATVASGFANSRAG 447
Query: 373 VKTLIKHTLF-YQLKSPE-------------DQQTFLETTLSEIVASLLASKGTMLTMNE 418
+ ++ TL+ Q P+ ++ FLE +SE ++ +
Sbjct: 448 LLEFLERTLYATQSTDPDRLENVTDRMLDYLERNGFLERDVSET--QRVSDDRAESEASR 505
Query: 419 AGHLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVI-PLEYRIPSD 477
H+ T G+ H V + + ++ L +S L + L R P
Sbjct: 506 EEHIEAT---------GIGHTVSRLYLDPMSAAEMVDGLCDSEQASALGLYHLVARTPDM 556
Query: 478 GILLSRSKVYDRYTKFHPQTLRVAEALGVTENLVALNVTGKLKDEK-KALLCRFFHACIL 536
L RS ++YT+ + R AE LG ++ + + E+ + L A +L
Sbjct: 557 WELYLRSGDREKYTEIAYE--REAEFLG--------DMPTEFESERFEDWLSALKTASLL 606
Query: 537 YDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEEL---PELWCYKQLLTDL 593
D + + +++ + Y I L+ + + + R EL PE+ ++
Sbjct: 607 EDWASEVDEERITERYSIGPGDLRGKVETAQWLLNAAERLAVELDLGPEVVAS---ISAA 663
Query: 594 PQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIARADAKEMVAKIR 646
Q + + L L + V RAR L AG + E + A+ ++ +R
Sbjct: 664 RQRVEHGVGEELLGLTGVGNVGRKRARWLFEAGIETREELRNAEKSVVLGALR 716
>gi|91773088|ref|YP_565780.1| ski2-like helicase [Methanococcoides burtonii DSM 6242]
gi|121689265|sp|Q12WZ6.1|HELS_METBU RecName: Full=Putative ski2-type helicase
gi|91712103|gb|ABE52030.1| DEAD/DEAH box helicase-like protein [Methanococcoides burtonii DSM
6242]
Length = 760
Score = 152 bits (383), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 119/395 (30%), Positives = 189/395 (47%), Gaps = 36/395 (9%)
Query: 10 AKAAEEFKFYLEEYA-GVK-----GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRI 63
A A+E+F+ + E G+K G L I + T EK L+ + + +
Sbjct: 78 ALASEKFERFKELAPFGIKVGISTGDLDSRADWLGVNDIIVATSEKTDSLLRN--GTSWM 135
Query: 64 DEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGIT 123
DEI +V+DE H+L+ RGP LE ++K++ L +Q+ A+SAT+GN ++ ++
Sbjct: 136 DEITTVVVDEIHLLDSKNRGPTLEVTITKLMRLNPDVQVVALSATVGNAREMADWLGAAL 195
Query: 124 YVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVL 183
+ RPT E V + K + + D+ + VL ++ L
Sbjct: 196 VLSEWRPTDLHEGVLFGDAINFPGSQKKIDRLEKDD--------AVNLVLDTIKAEGQCL 247
Query: 184 IFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIE----ALKEENDGKLSTN--LEEC 237
+F SS+ C+ A + +K K + + +I+ A + E+ G+ T L C
Sbjct: 248 VFESSRRNCAGFA------KTASSKVAKILDNDIMIKLAGIAEEVESTGETDTAIVLANC 301
Query: 238 ILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIR-----DSY 292
I GVA+HHA L + R+L+E + +++I T TLAAG+NLPA+RVIIR DS
Sbjct: 302 IRKGVAFHHAGLNSNHRKLVENGFRQNLIKVISSTPTLAAGLNLPARRVIIRSYRRFDSN 361
Query: 293 VGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRF-SSMMNAGPEPISSHMDP 351
G I + YKQM GRAGR L GES++L KT +F + + + A E I S +
Sbjct: 362 FGMQPIPVLEYKQMAGRAGRPHLDPYGESVLLAKTYDEFAQLMENYVEADAEDIWSKLGT 421
Query: 352 P-TLVDLILEVVAANLCSSLEDVKTLIKHTLF-YQ 384
L +L + S+ +++ T F YQ
Sbjct: 422 ENALRTHVLSTIVNGFASTRQELFDFFGATFFAYQ 456
>gi|18312257|ref|NP_558924.1| ATP-dependent, DNA binding helicase [Pyrobaculum aerophilum str.
IM2]
gi|18159700|gb|AAL63106.1| ATP-dependent, DNA binding helicase [Pyrobaculum aerophilum str.
IM2]
Length = 704
Score = 151 bits (382), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 108/394 (27%), Positives = 190/394 (48%), Gaps = 30/394 (7%)
Query: 28 GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILE 87
G + ++L + + + T EK L+ + + + +GL+V+DE H L +P+RGP+LE
Sbjct: 101 GDFDSEDKRLYEYDVVVVTYEKLDSLLRH--RPSWLGSVGLVVVDEIHYLGDPKRGPVLE 158
Query: 88 CVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSF 147
+++KV +L Q +SAT+GN +++++ + RP E V +++
Sbjct: 159 SIIAKVRHLGLRTQFIGLSATVGNAEEVASWLGARLVSSSWRPVPLREGVYYGGKIY--- 215
Query: 148 DGKSLTEIYADNLDYSLTGSGPDAV---LHLVQGNLMVLIFCSSKIACSNLALRLQFDRF 204
+AD SL GSG + + V G L+F +S+ + +A +
Sbjct: 216 --------FADGSKKSL-GSGEAEIALAIDAVAGGGQALVFTNSRSSTVRIAKAIAQAVA 266
Query: 205 --PGTKEYKKQEKEDLI-EALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAY 261
P + E + L E + + L + I GVA+H+A L RRL+EE +
Sbjct: 267 AHP-ARLINPAEAQSLANEVINASTSKIIGRELADLIARGVAFHNAGLELEVRRLVEEGF 325
Query: 262 LAGTLQIICCTSTLAAGVNLPAQRVIIR-----DSYVGRDFISLNMYKQMVGRAGRTGLQ 316
G ++++ T+TLAAGVNLPA+RV+I D +GR+ I + Y+QM GRAGR G+
Sbjct: 326 RRGVIKVVVSTTTLAAGVNLPARRVVIADYERFDPVLGREEIPVLEYRQMAGRAGRPGMD 385
Query: 317 ESGESIMLCKTMQ--DFLRFSSMMNAGPEPISSH-MDPPTLVDLILEVVAANLCSSLEDV 373
GE++++ ++ D+L + E + SH + P L +L V S++++
Sbjct: 386 PYGEAVIVARSRGEVDYL-MERYLRGRVEDVKSHILSAPNLRSHVLGAVGGGYAKSIDEL 444
Query: 374 KTLIKHTLFYQLKSPEDQQTFLETTLSEIVASLL 407
+TL Y + L + ++ V L+
Sbjct: 445 VDFFSNTLGYHQVKTSLKTALLRSKVASAVDELI 478
>gi|448342382|ref|ZP_21531333.1| ski2-like helicase [Natrinema gari JCM 14663]
gi|445625759|gb|ELY79113.1| ski2-like helicase [Natrinema gari JCM 14663]
Length = 786
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 167/702 (23%), Positives = 314/702 (44%), Gaps = 64/702 (9%)
Query: 15 EFKFYLEEYAGVK-----GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE--NRIDEIG 67
EF+ Y E GV G Y T L K I + T EK + SL++ + + E+
Sbjct: 87 EFEAY--ERFGVTVGVTTGNYESTSDWLATKDIVVATSEK----VDSLVRNGADWLSELT 140
Query: 68 LIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVEN 127
+V DE H++++ RGP LE ++K+ L +Q+ A+SAT+GN + ++ +++ +
Sbjct: 141 CVVSDEVHLIDDRNRGPTLEVTLAKLRKLNPRMQLVALSATVGNADEIADWLDAALVDTD 200
Query: 128 SRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCS 187
RP + V + +FD S E+ + V +++ + L+F +
Sbjct: 201 WRPIELQMGVHYGNAL--NFDDGSTREVPVQGSEKQEAA----LVRDILREDGSSLVFVN 254
Query: 188 SKIACSNLALRLQFDRFPGTKEYKKQEKEDLIE---ALKEENDGKLSTNLEECILYGVAY 244
S+ A RL T E +E+ +L E +++++D + ST+L + +G A+
Sbjct: 255 SRRNAEAAARRLGD---VSTNELTPEERTELAELADEIRDDSDTETSTDLAAAVEHGAAF 311
Query: 245 HHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRD------SYVGRDFI 298
HHA L++ +R ++E+A+ L++I T TLAAGVN PA+RVI+RD S G +
Sbjct: 312 HHAGLSSTQRSIVEDAFRDRLLKVISATPTLAAGVNTPARRVIVRDWRRFDPSAGGMAPL 371
Query: 299 SLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLR-FSSMMNAGPEPISSHMDP-PTLVD 356
+ QM+GRAGR GL GE+++L + + F + A PEP+ S + P L
Sbjct: 372 DVLEVHQMMGRAGRPGLDPYGEAVLLATSHDESEELFDRYIWAEPEPVRSKLAAEPALRT 431
Query: 357 LILEVVAANLCSSLEDVKTLIKHTLFY-QLKSPEDQQTFLETTLSEIVASLLASKGTMLT 415
+L +A+ + E + ++ TL+ Q P +T +T L + ++ + +
Sbjct: 432 HVLATIASGFARTREGLLEFLEATLYASQSSEPGRLETVTDTVLQYLESNDFIERDSA-E 490
Query: 416 MNEAGHLSLTSIAKAAVQAGLSHDVCLIIYSDLLH--NKLNFCLLNSLHMLFLVIPLEYR 473
++ + TS A A G + + + L H ++L +++ ++ + + R
Sbjct: 491 ADDGADGAFTSAADLADDGGRDEE---LEATSLGHTVSRLYLDPMSAAEIVHGIADADER 547
Query: 474 IPSDGI--LLSRS-KVYDRYTKFHPQTL-------RVAEALGVTENLVALNVTGKLKDEK 523
+ G+ L+SR+ +Y+ Y + R AE LG + + ++E+
Sbjct: 548 PTALGLYQLVSRTPDMYELYLRSGEDEQFGELFYEREAELLG--------DAPSEFEEER 599
Query: 524 -KALLCRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPE 582
+ L +L D + +++ Y I L+ ++ + E+
Sbjct: 600 FEDWLSALKTGKLLEDWATETDEEQLTDRYEIGPGDLRGKVDTAEWLLGAAESLAAEIDS 659
Query: 583 LWCYKQLLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIARADAKEMV 642
W + + + + L L+ + GV RAR+L +AG + AD ++
Sbjct: 660 EWTVA--VREARARVEHGVGEELLELVGVGGVGRKRARRLYDAGIEEPADLRTADKGVIL 717
Query: 643 AKIRHLPLRSARNLISAAKLHFITKMDKVEAMKNLIQNLQKN 684
A ++ ++A N++ A + MD VE + + N
Sbjct: 718 AALKG--QKTAENILENAGREDPS-MDGVEPRSDGASDGDGN 756
>gi|119872658|ref|YP_930665.1| DEAD/DEAH box helicase [Pyrobaculum islandicum DSM 4184]
gi|119674066|gb|ABL88322.1| DEAD/DEAH box helicase domain protein [Pyrobaculum islandicum DSM
4184]
Length = 706
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 108/369 (29%), Positives = 181/369 (49%), Gaps = 27/369 (7%)
Query: 28 GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILE 87
G + R+L + + + T EK L+ + + + +VIDE H L +P+RG +LE
Sbjct: 101 GDFDSDDRRLYEYDVVVVTYEKLDSLLRH--RPGWLSSVKTVVIDEIHYLGDPKRGAVLE 158
Query: 88 CVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSF 147
+++K+ +L Q +SAT+GN ++ ++ V + RP E V R++
Sbjct: 159 SIIAKIKHLGLRAQFIGLSATVGNATEVADWLGARLVVSSWRPVPLREGVYYGGRIY--- 215
Query: 148 DGKSLTEIYADNLDYSLTGSGPDAV---LHLVQGNLMVLIFCSSKIACSNLALRLQFDR- 203
++D +++ SG V + +V L+F +S+ + + LA +
Sbjct: 216 --------FSDGSHRAVSASGDAEVALAVDVVAEGGQALVFTNSRSSTARLAKAIARAIA 267
Query: 204 -FPGTKEYKKQEKEDLIEALKEENDGKL-STNLEECILYGVAYHHADLTAGERRLIEEAY 261
+P TK E E L E + + K+ L E + GVA+H+A L RRL+E+ +
Sbjct: 268 AYP-TKLINVAETEALAEEILRVSSSKIIGRELAEVVARGVAFHNAGLELEVRRLVEDGF 326
Query: 262 LAGTLQIICCTSTLAAGVNLPAQRVIIR-----DSYVGRDFISLNMYKQMVGRAGRTGLQ 316
G ++++ T+TLAAGVNLPA+RV+I D VGR+ I + YKQM GRAGR GL
Sbjct: 327 RRGVIKVVVSTTTLAAGVNLPARRVVIADYERFDPVVGREEIPVLEYKQMAGRAGRPGLD 386
Query: 317 ESGESIMLCKTMQDFLRFSSMMNAGP-EPISSH-MDPPTLVDLILEVVAANLCSSLEDVK 374
GE++++ ++ + G E I SH + P L +L V S++++
Sbjct: 387 AVGEAVIVARSKNEVGYLMERYIKGQVENIKSHILLEPNLRTHVLGAVGGGYAGSIDELV 446
Query: 375 TLIKHTLFY 383
+TL Y
Sbjct: 447 EFFSNTLGY 455
>gi|448330461|ref|ZP_21519742.1| ski2-like helicase [Natrinema versiforme JCM 10478]
gi|445611508|gb|ELY65257.1| ski2-like helicase [Natrinema versiforme JCM 10478]
Length = 789
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 117/401 (29%), Positives = 202/401 (50%), Gaps = 26/401 (6%)
Query: 14 EEFKFYLEEYA---GVK-GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE--NRIDEIG 67
EEF+ Y E++ GV G Y T L K I + T EK + SL++ + + ++
Sbjct: 86 EEFEAY-EQFGVTTGVTTGNYESTSDWLATKDIIVATSEK----VDSLVRNGADWLSDLT 140
Query: 68 LIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVEN 127
+V DE H++++ RGP LE ++K+ L +Q+ A+SAT+GN + ++ +++ +
Sbjct: 141 CVVSDEVHLIDDRNRGPTLEVTLAKLRKLNPRMQVVALSATVGNADEIADWLDAALVDTD 200
Query: 128 SRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCS 187
RP V + +FD S E+ D + V ++Q L+F +
Sbjct: 201 WRPIDLQMGVHYGNAL--NFDDGSTREVPVDGSEKQEAA----LVRDILQEEGSSLVFVN 254
Query: 188 SKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHA 247
S+ A RL ++ E +L + +++++D + S +L E + +G A+HHA
Sbjct: 255 SRRNAEAAARRLGGVSKNELTAEEQAELAELADEIRDDSDTETSADLAEAVEHGSAFHHA 314
Query: 248 DLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRD------SYVGRDFISLN 301
L++ +R ++E+A+ L++I T TLAAGVN PA+RVI+RD S G + +
Sbjct: 315 GLSSTQRTIVEDAFRDRLLKVISATPTLAAGVNTPARRVIVRDWRRFDPSAGGMAPLDVL 374
Query: 302 MYKQMVGRAGRTGLQESGESIMLCKTMQDFLR-FSSMMNAGPEPISSHMDP-PTLVDLIL 359
QM+GRAGR GL GE+++L K+ + F + A PEP+ S + P L +L
Sbjct: 375 EVHQMMGRAGRPGLDPYGEAVLLAKSHDESEELFDRYIWADPEPVRSKLAAEPALRTHVL 434
Query: 360 EVVAANLCSSLEDVKTLIKHTLF-YQLKSPEDQQTFLETTL 399
+A+ + E + ++ TL+ Q P +T +T L
Sbjct: 435 ATIASGFARTREGLLEFLEATLYASQSSEPGRLETVTDTVL 475
>gi|448354581|ref|ZP_21543337.1| ski2-like helicase [Natrialba hulunbeirensis JCM 10989]
gi|445637469|gb|ELY90619.1| ski2-like helicase [Natrialba hulunbeirensis JCM 10989]
Length = 807
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 122/394 (30%), Positives = 199/394 (50%), Gaps = 39/394 (9%)
Query: 15 EFKFYLEEYA---GVK-GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE--NRIDEIGL 68
EF Y EE+ GV G Y T L K I + T EK + SL++ + + ++
Sbjct: 87 EFDAY-EEFGVTTGVATGNYESTSEWLATKDIIVATSEK----VDSLVRNGADWLSDLTC 141
Query: 69 IVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVENS 128
+V DE H++++ RGP LE ++K+ L +Q+ A+SAT+GN + L+ +++ +
Sbjct: 142 VVSDEVHLIDDRNRGPTLEVTLAKLRRLNPQLQVVALSATVGNADELADWLDAELVDTDW 201
Query: 129 RPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVL--HLVQGNLMVLIFC 186
RP V + +FD E+ + G +A L ++Q L+F
Sbjct: 202 RPIDLQMGVHYGNAL--NFDDGETREVPVE------AGEKQEAALVRDILQEGGSSLVFV 253
Query: 187 SSKIACSNLALRL-QFDRFPGTKEYKKQEKEDLIEAL----KEENDGKLSTNLEECILYG 241
+S+ A RL Q ++E E+ DL EAL +E++D + S +L +C+ G
Sbjct: 254 NSRRNAEAAARRLGQVS----SRELTAGERSDL-EALATEIREDSDTETSQDLADCVERG 308
Query: 242 VAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRD------SYVGR 295
A+HHA L++ +R L+E+A+ L++I T TLAAGVN PA+RVI+RD S G
Sbjct: 309 SAFHHAGLSSTQRSLVEDAFRDRLLKVISATPTLAAGVNTPARRVIVRDWRRFDPSAGGM 368
Query: 296 DFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLR-FSSMMNAGPEPISSHMDP-PT 353
+ + QM+GRAGR GL GE+++L K+ + F + A PEP+ S + P
Sbjct: 369 APLDVLEVHQMMGRAGRPGLDPYGEAVLLAKSHDESQELFDRYVWADPEPVRSKLAAEPA 428
Query: 354 LVDLILEVVAANLCSSLEDVKTLIKHTLFYQLKS 387
L +L +A+ + E + ++ TL+ S
Sbjct: 429 LRTHVLATIASGFARTREGLLEFLEATLYASQSS 462
>gi|145590377|ref|YP_001152379.1| DEAD/DEAH box helicase [Pyrobaculum arsenaticum DSM 13514]
gi|145282145|gb|ABP49727.1| DEAD/DEAH box helicase domain protein [Pyrobaculum arsenaticum DSM
13514]
Length = 710
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 114/395 (28%), Positives = 200/395 (50%), Gaps = 31/395 (7%)
Query: 28 GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILE 87
G + R+L + + + T EK L+ + + + +G++V+DE H L +P+RGP+LE
Sbjct: 103 GDFESDDRRLYEYDVVVVTYEKLDSLLRH--RPSWLSSVGVVVVDEIHYLGDPKRGPVLE 160
Query: 88 CVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVENS-RPTKHSEYVTVDKRVFQS 146
+++K+ +L Q +SAT+GN ++ ++ G V++S RP E V R++
Sbjct: 161 SIIAKIRHLGLRAQFIGLSATVGNAAEVAEWL-GARLVKSSWRPVPLREGVYYGGRIY-- 217
Query: 147 FDGKSLTEIYADNLDYSLTGSGPDAV---LHLVQGNLMVLIFCSSKIACSNLALRLQFDR 203
+ D ++ SG V L V G L+F +S+ + + +A +
Sbjct: 218 ---------FPDGAHKAVGASGEAEVALALDAVAGGGQALVFTNSRSSTARIAKAVAKAV 268
Query: 204 --FPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAY 261
+P + + E L+ + + L E + GVA+H+A L RRL+EE +
Sbjct: 269 AAYPAQLINPGEARALAEEVLRVSSSKIIGRELAELVARGVAFHNAGLELEVRRLVEEGF 328
Query: 262 LAGTLQIICCTSTLAAGVNLPAQRVIIR-----DSYVGRDFISLNMYKQMVGRAGRTGLQ 316
G ++++ T+TLAAGVNLPA+RV++ D VGR+ I + Y+QM GRAGR GL
Sbjct: 329 RRGVVKVVVSTTTLAAGVNLPARRVVVAEYERYDPVVGREEIPVLEYRQMAGRAGRPGLD 388
Query: 317 ESGESIMLCKTMQD--FLRFSSMMNAGPEPISSH-MDPPTLVDLILEVVAANLCSSLEDV 373
GE++++ ++ D +L +M E + SH + P L L V S++D+
Sbjct: 389 PYGEAVIVARSRGDVEYLMERYVMGQ-VENVRSHILSAPNLRSHALGAVGGGYAKSVDDL 447
Query: 374 KTLIKHTL-FYQLKSPEDQQTFLETTLSEIVASLL 407
+TL F+Q K+P + + L + ++E + L+
Sbjct: 448 VDFFSNTLGFHQAKTPL-KSSLLRSKVAEALDELV 481
>gi|390961611|ref|YP_006425445.1| Ski-2 like helicase [Thermococcus sp. CL1]
gi|390519919|gb|AFL95651.1| Ski-2 like helicase [Thermococcus sp. CL1]
Length = 726
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 169/643 (26%), Positives = 273/643 (42%), Gaps = 84/643 (13%)
Query: 24 AGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRG 83
A G Y T L + I + T EK L+ IDE+ L+V DE H++ RG
Sbjct: 99 AATTGDYDSTDEWLGRYDIIVATAEKFDSLLRH--GARWIDEVKLVVADEVHLIGSYDRG 156
Query: 84 PILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRV 143
LE +++ +L QI A+SAT+GN L+ +++ + + RP V + K +
Sbjct: 157 ATLEMILTHML---GKAQILALSATVGNAEELAEWLDAALVMSDWRP------VQLRKGI 207
Query: 144 FQ-----SFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALR 198
F DGK E Y +N YSL V V+ L+F +++ + AL
Sbjct: 208 FHLGTLVWEDGK--VERYPENW-YSL-------VTDAVKRGKGALVFVNTRRSAEKEALA 257
Query: 199 LQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIE 258
L G K EK L E D S L+ + GVA+HHA L+ ER LIE
Sbjct: 258 LS-KLVSGY--LTKPEKRALERLASELEDNPTSEKLKRALKGGVAFHHAGLSRAERTLIE 314
Query: 259 EAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGRDFISLNM----YKQMVGRAGRTG 314
+A+ G +++I T TL+AGVNLP+ RVIIRD+ +F +++ +QM+GRAGR
Sbjct: 315 DAFREGLIKVITATPTLSAGVNLPSFRVIIRDTKRYSNFGWVDIPVLEIQQMMGRAGRPR 374
Query: 315 LQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHM-DPPTLVDLILEVVAANLCSSLEDV 373
+ GE+I++ +T + + PE + S + + +L ++ SS ++
Sbjct: 375 YDKFGEAIIVARTEEPGKLMERYIRGRPEKLFSMLANEQAFRSQVLALITNFGVSSFREL 434
Query: 374 KTLIKHTLFYQLKSPEDQQTFLETTLSEIVASLLASKGTMLTMNEAGHLSLTSIAKAAVQ 433
+ ++ T + + + LE E+V L+ ++ L + + + K Q
Sbjct: 435 ISFLERTFYAHQRK---DLSSLEYKAKEVVYFLIENEFVDLDLED--NFMPLPFGKRTSQ 489
Query: 434 AGLSHDVCLIIYSDLLHNKL---NFCLLNSLHMLFLVIPLEYRIPSDGILLSRSKVYDRY 490
+Y D L K F + F + L P L +R + + Y
Sbjct: 490 ----------LYIDPLTAKKFRDTFPAIERNPNPFGIFQLIASTPDMATLTARRREMEDY 539
Query: 491 TKFHPQTLRVAEALGVTENLVALNVTGKL-------KDEK-KALLCRFFHACILYDVLNF 542
+A + G+L +D + + L + A +L D +N
Sbjct: 540 LD------------------LAYELEGELYASIPYYEDSRFQGFLGQVKTAKVLLDWINE 581
Query: 543 DNHQKVAKMYGIQNSHLQNFLNVTSYFAS---KVYRFCEELPELWCYKQLLTDLPQTLMY 599
++ + Y I L L + + ++YR E E+ Y L DL L +
Sbjct: 582 VPEARIYETYSIDPGDLYRILELADWLMYSLIELYRLFEPKAEVLQY---LRDLHLRLRH 638
Query: 600 CRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIARADAKEMV 642
L L+ LP + RAR L NAG+ S E I RA K+++
Sbjct: 639 GVREELLELVKLPNIGRKRARALYNAGFRSQEDIMRAKVKDLL 681
>gi|448664116|ref|ZP_21683919.1| ski2-like helicase [Haloarcula amylolytica JCM 13557]
gi|445774761|gb|EMA25775.1| ski2-like helicase [Haloarcula amylolytica JCM 13557]
Length = 800
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 121/425 (28%), Positives = 209/425 (49%), Gaps = 26/425 (6%)
Query: 14 EEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENR--IDEIGLIVI 71
EEF+ Y + G Y L K I + T EK + SL++ + I+++ +V
Sbjct: 89 EEFEQYGLDIGVSTGNYESEGGWLADKDIVVATSEK----VDSLVRNDAPWIEDLTCVVT 144
Query: 72 DEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVENSRPT 131
DE H++++ +RGP LE ++K+ L +Q A+SATIGN AL+T+++ + RP
Sbjct: 145 DEVHLVDDGERGPTLEVTLAKLRRLNPDLQTVALSATIGNAEALATWLDAGLVDSDWRPI 204
Query: 132 KHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIA 191
+ V + DG +N + V + ++ + L+F +S+
Sbjct: 205 DLQKGVHY-GQALHLEDGSQQRLSVQNNEKQTAA-----IVRNTLEDDGSTLVFVNSRRN 258
Query: 192 CSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTA 251
A RL P + ++ + D+ E +++ +D + S +L + + G A+HHA L+
Sbjct: 259 AEAAAGRLANTVRPHLTDEERAQLADIAEEIRDVSDTETSDDLADAVADGAAFHHAGLSR 318
Query: 252 GERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIR------DSYVGRDFISLNMYKQ 305
G R L+E+A+ ++++C T TLAAGVN P++RV++R S G +S+ Q
Sbjct: 319 GHRELVEDAFRDRLVKVVCATPTLAAGVNTPSRRVVVRDWRRYDGSAGGMAPLSVLEVHQ 378
Query: 306 MVGRAGRTGLQESGESIMLCKTMQDFLR-FSSMMNAGPEPISSHMDP-PTLVDLILEVVA 363
M+GRAGR GL GE++++ + + F + A PEP+ S + P L IL VA
Sbjct: 379 MMGRAGRPGLDPYGEAVLIASSHDEVDELFERYVWADPEPVRSKLAAEPALRTHILATVA 438
Query: 364 ANLCSSLEDVKTLIKHTLFYQLKSPEDQQTFLETTLSEIVASLLASKGTMLTMNEAGHLS 423
+ S E + ++ TL+ S D LE + +++ L + L + E+G L
Sbjct: 439 SGFARSREGLLEFLEQTLY---ASQTDDSGQLERVVDDVLTYL--QRNDFLEI-ESGELD 492
Query: 424 LTSIA 428
TS+
Sbjct: 493 ATSLG 497
>gi|333911571|ref|YP_004485304.1| ski2-type helicase [Methanotorris igneus Kol 5]
gi|333752160|gb|AEF97239.1| ski2-type helicase [Methanotorris igneus Kol 5]
Length = 699
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 115/381 (30%), Positives = 194/381 (50%), Gaps = 27/381 (7%)
Query: 14 EEFKFYLEEYAGVK-----GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGL 68
EEFK E+Y G+K G Y K L+ +I I T EK L+ I + ++ + +
Sbjct: 87 EEFKRKYEKY-GLKVALSIGDYD-EKEDLSSYNIIITTAEKLDSLMRHEI--DWLNYVSV 142
Query: 69 IVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVENS 128
++DE HM+N+ +RG LE +++K+ L +QI +SATIGN L+ ++ ++N
Sbjct: 143 AIVDEIHMINDEKRGGTLEVLLTKLKNL--DVQIIGLSATIGNPEELAEWLNAELIIDNW 200
Query: 129 RPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSS 188
RP K + + ++ +++N +L VL V+ L+FC+S
Sbjct: 201 RPVKLRKGIFFQNKIMYLNGACKELPNFSNNPMLNL-------VLDCVKEGGCCLVFCNS 253
Query: 189 KIACSNLALRLQFDRF-PGTKEYKKQE-KEDLIEALKEENDGKLSTNLEECILYGVAYHH 246
K + A +L ++ +++Y+ Q+ KE+++ L + L EC+ GVA+HH
Sbjct: 254 KNGAVSEAKKLNLKKYLSNSEKYELQKLKEEILSILDPPTE--TCKTLAECLEKGVAFHH 311
Query: 247 ADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRD----SYVGRDFISLNM 302
A LT R+++EE + +++ICCT TL+AG+N+P +R I+RD S I +
Sbjct: 312 AGLTYEHRKIVEEGFRNKLIKVICCTPTLSAGINIPCRRAIVRDLMRFSNGRMKPIPIME 371
Query: 303 YKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHM-DPPTLVDLILEV 361
Q +GRAGR GL GE I+ K +D R + PE I S + + L +L +
Sbjct: 372 IHQCIGRAGRPGLDPYGEGIIFVKNERDLERAEQYLEGKPEYIYSKLSNQAVLRTQLLGM 431
Query: 362 VAANLCSSLEDVKTLIKHTLF 382
+A + D+ + IK+T +
Sbjct: 432 IATREIENEFDLISFIKNTFY 452
>gi|448588746|ref|ZP_21649325.1| ski2-like helicase [Haloferax elongans ATCC BAA-1513]
gi|445736233|gb|ELZ87778.1| ski2-like helicase [Haloferax elongans ATCC BAA-1513]
Length = 818
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 118/395 (29%), Positives = 197/395 (49%), Gaps = 46/395 (11%)
Query: 15 EFKFYLEEYA---GVK-GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENR--IDEIGL 68
EF+ + EEY GV G Y + L+ + I + T EK + SL++ N +D++
Sbjct: 87 EFERW-EEYGIDVGVSTGNYESSGEWLSSRDIIVATSEK----VDSLVRNNAAWMDQLSC 141
Query: 69 IVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVENS 128
+V DE H++N+ RGP LE ++K+ L S+Q+ A+SAT+GN ++ +++ +
Sbjct: 142 VVADEVHLVNDRHRGPTLEVTLAKLRQLNPSLQVVALSATVGNAGEVADWLDASLVHSDW 201
Query: 129 RPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDY--------SLTGSGPDAVLHLVQGNL 180
RP V + +FD S E+ D +L G G D QG+
Sbjct: 202 RPIDLKMGVHYGNAI--TFDDGSQREVPVGKGDRQTPALVADALEGDGDDD-----QGS- 253
Query: 181 MVLIFCSSKIACSNLALRLQFDRFPGTKEY----KKQEKEDLIEALKEENDGKLSTNLEE 236
L+F +S+ + A R+ T++Y ++ E +L +++ +D + S +L +
Sbjct: 254 -SLVFVNSRRNAESAARRMAG----VTEQYITGDERSELAELAAEIRDVSDTETSEDLAK 308
Query: 237 CILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRD------ 290
+ G A+HHA L + R L+E+A+ ++ IC T TLAAGVN P++RV++RD
Sbjct: 309 AVAKGAAFHHAGLASEHRTLVEDAFRDRLIKCICATPTLAAGVNTPSRRVVVRDWQRYDG 368
Query: 291 SYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTM--QDFLRFSSMMNAGPEPISSH 348
Y G + + QM+GRAGR GL GE+++L K +D L F + A E + S
Sbjct: 369 DYGGMKPLDVLEVHQMMGRAGRPGLDPYGEAVLLSKDADSRDEL-FERYIWADAEDVHSK 427
Query: 349 MDP-PTLVDLILEVVAANLCSSLEDVKTLIKHTLF 382
+ P L +L VA+ + E + + TL+
Sbjct: 428 LAAEPALRTHLLATVASGFAHTREGLLEFLDQTLY 462
>gi|379005339|ref|YP_005261011.1| Superfamily II helicase [Pyrobaculum oguniense TE7]
gi|375160792|gb|AFA40404.1| Superfamily II helicase [Pyrobaculum oguniense TE7]
Length = 713
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 114/395 (28%), Positives = 199/395 (50%), Gaps = 31/395 (7%)
Query: 28 GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILE 87
G + R+L + + + T EK L+ + + + +G++V+DE H L +P+RGP+LE
Sbjct: 106 GDFESDDRRLYEYDVVVVTYEKLDSLLRH--RPSWLSSVGVVVVDEIHYLGDPKRGPVLE 163
Query: 88 CVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVENS-RPTKHSEYVTVDKRVFQS 146
+++K+ +L Q +SAT+GN ++ ++ G V++S RP E V R++
Sbjct: 164 SIIAKIRHLGLRAQFIGLSATVGNAAEVAEWL-GARLVKSSWRPVTLREGVYYGGRIY-- 220
Query: 147 FDGKSLTEIYADNLDYSLTGSGPDAV---LHLVQGNLMVLIFCSSKIACSNLALRLQFDR 203
+ D ++ SG V L V G L+F +S+ + +A +
Sbjct: 221 ---------FPDGTSKAVGASGDAEVALALDAVAGGGQALVFTNSRSSTVRIAKAVAKAV 271
Query: 204 --FPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAY 261
+P + + E L+ + + L E + GVA+H+A L RRL+EE +
Sbjct: 272 AAYPAQLINPGEARALAEEVLRASSSKIIGRELAELVARGVAFHNAGLELEVRRLVEEGF 331
Query: 262 LAGTLQIICCTSTLAAGVNLPAQRVIIR-----DSYVGRDFISLNMYKQMVGRAGRTGLQ 316
G ++++ T+TLAAGVNLPA+RV++ D VGR+ I + Y+QM GRAGR GL
Sbjct: 332 RRGVVKVVVSTTTLAAGVNLPARRVVVAEYERYDPVVGREEIPVLEYRQMAGRAGRPGLD 391
Query: 317 ESGESIMLCKTMQD--FLRFSSMMNAGPEPISSH-MDPPTLVDLILEVVAANLCSSLEDV 373
GE++++ ++ D +L +M E + SH + P L L V S++D+
Sbjct: 392 PYGEAVIVARSRGDVEYLMERYVMGQ-VENVRSHILSAPNLRSHALGAVGGGYAKSVDDL 450
Query: 374 KTLIKHTL-FYQLKSPEDQQTFLETTLSEIVASLL 407
+TL F+Q K+P + + L + ++E + L+
Sbjct: 451 VDFFSNTLGFHQAKTPL-KSSLLRSKVAEALDELV 484
>gi|119719413|ref|YP_919908.1| DEAD/DEAH box helicase domain-containing protein [Thermofilum
pendens Hrk 5]
gi|119524533|gb|ABL77905.1| DEAD/DEAH box helicase domain protein [Thermofilum pendens Hrk 5]
Length = 739
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 126/412 (30%), Positives = 196/412 (47%), Gaps = 46/412 (11%)
Query: 28 GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILE 87
G Y L K + + T EK L+ ++ L++ DE H+L +RG LE
Sbjct: 108 GDYDTADPSLGKYDVIVTTNEKADSLLRH--SAPWFPDVTLVIADEVHLLGSEKRGATLE 165
Query: 88 CVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSF 147
+++++L + QI +SATIGN+ ++ ++ RP E V D +F
Sbjct: 166 VLLTRILLSEDPPQILGLSATIGNLEEVARWLNATPVSVEWRPVLLREGVYYDGTIF--- 222
Query: 148 DGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNL----MVLIFCSSKIACSNLALRLQ-FD 202
YAD S+ G A+ +LV L L+F ++ A S+ A +L +
Sbjct: 223 --------YADGASRSVEDVG-SALANLVHDVLREEGQALVFSPTRRAASSDAKKLSVYT 273
Query: 203 RFPGTKEYKKQEKEDLIEALKE---ENDGKLSTNLEECILYGVAYHHADLTAGERRLIEE 259
R K + E+ L EA ++ + KL+ L E +L+GVA+HHA L+ R +E+
Sbjct: 274 R----KFLRDSERRHLKEAARKVLSSHADKLTNELAELMLHGVAFHHAGLSGDARETVEQ 329
Query: 260 AYLAGTLQIICCTSTLAAGVNLPAQRVIIRD--------SYVGRDFISLNMYKQMVGRAG 311
+ G L+ + T TLAAGVNLPA+RVII D Y + I + YKQM GRAG
Sbjct: 330 LFREGFLKTVVATPTLAAGVNLPARRVIITDYRRYNVELGY--HESIPVMEYKQMAGRAG 387
Query: 312 RTGLQESGESIMLCKTMQ--DFLRFSSMMNAGPEPISSHM-DPPTLVDLILEVVAA-NLC 367
R GE+I++ + M+ +FL F + + PE + S + P L +L V++ +
Sbjct: 388 RPQYDREGEAILIARNMEEVEFL-FKRYVYSAPETLQSQLGSEPVLRAQVLAVISTESRI 446
Query: 368 SSLEDVKTLIKHTLFYQLKSPEDQQTFLETTLSEIVASLLASKGTMLTMNEA 419
+ ED+ ++ T F+ LK TF +TLS V L G + EA
Sbjct: 447 KTTEDLDRFLERT-FFALKF----GTFSLSTLSRKVLRRLVEGGLVELNGEA 493
>gi|448578762|ref|ZP_21644138.1| ski2-like helicase [Haloferax larsenii JCM 13917]
gi|445725345|gb|ELZ76969.1| ski2-like helicase [Haloferax larsenii JCM 13917]
Length = 821
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 118/395 (29%), Positives = 197/395 (49%), Gaps = 46/395 (11%)
Query: 15 EFKFYLEEYA---GVK-GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENR--IDEIGL 68
EF+ + EEY GV G Y + L+ + I + T EK + SL++ N +D++
Sbjct: 87 EFERW-EEYGIDVGVSTGNYESSGEWLSSRDIIVATSEK----VDSLVRNNAAWMDQLSC 141
Query: 69 IVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVENS 128
+V DE H++N+ RGP LE ++K+ L S+Q+ A+SAT+GN ++ +++ +
Sbjct: 142 VVADEVHLVNDRHRGPTLEVTLAKLRQLNPSLQVVALSATVGNAGEVADWLDASLVHSDW 201
Query: 129 RPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDY--------SLTGSGPDAVLHLVQGNL 180
RP V + +FD S E+ D +L G G D QG+
Sbjct: 202 RPIDLKMGVHYGNAI--TFDDGSQREVPVGKGDRQTPALVADALEGDGDDD-----QGS- 253
Query: 181 MVLIFCSSKIACSNLALRLQFDRFPGTKEY----KKQEKEDLIEALKEENDGKLSTNLEE 236
L+F +S+ + A R+ T++Y ++ E +L +++ +D + S +L +
Sbjct: 254 -SLVFVNSRRNAESAARRMAG----VTEQYITGDERSELAELAAEIRDVSDTETSEDLAK 308
Query: 237 CILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRD------ 290
+ G A+HHA L + R L+E+A+ ++ IC T TLAAGVN P++RV++RD
Sbjct: 309 AVAKGAAFHHAGLASEHRTLVEDAFRDRLIKCICATPTLAAGVNTPSRRVVVRDWQRYDG 368
Query: 291 SYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTM--QDFLRFSSMMNAGPEPISSH 348
Y G + + QM+GRAGR GL GE+++L K +D L F + A E + S
Sbjct: 369 DYGGMKPLDVLEVHQMMGRAGRPGLDPYGEAVLLSKDADSRDEL-FERYIWADAEDVHSK 427
Query: 349 MDP-PTLVDLILEVVAANLCSSLEDVKTLIKHTLF 382
+ P L +L VA+ + E + + TL+
Sbjct: 428 LAAEPALRTHLLATVASGFAHTREGLLEFLDQTLY 462
>gi|448696256|ref|ZP_21697817.1| ski2-like helicase [Halobiforma lacisalsi AJ5]
gi|445783944|gb|EMA34768.1| ski2-like helicase [Halobiforma lacisalsi AJ5]
Length = 798
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 117/387 (30%), Positives = 198/387 (51%), Gaps = 33/387 (8%)
Query: 14 EEFKFYLEEYA---GVK-GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE--NRIDEIG 67
EEF+ Y E++ GV G Y T L K I + T EK + SL++ + + ++
Sbjct: 86 EEFEAY-EQFGVTVGVATGNYESTSDWLATKDIVVATSEK----VDSLVRNGADWLSDLT 140
Query: 68 LIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVEN 127
+V DE H++++ +RGP LE ++K+ L +Q A+SAT+GN + ++ +++ +
Sbjct: 141 CVVSDEIHLIDDRERGPTLEVTLAKLRRLNPGMQQVALSATVGNADEIAGWLDAELIDTD 200
Query: 128 SRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCS 187
RP V + +FD S E+ + + V ++Q L+F +
Sbjct: 201 WRPIDLKMGVHYGNAL--NFDDGSTREVPVEGSEKQEAA----LVRDILQEGGSSLVFVN 254
Query: 188 SKIACSNLALRL-QFDRFPGTKEYKKQEKEDLIE---ALKEENDGKLSTNLEECILYGVA 243
S+ A RL Q R +E E+ +L E +++++D + ST+L +C+ G A
Sbjct: 255 SRRNAEAAARRLGQVSR----EELTADERAELAELAAEIRDDSDTETSTDLADCVERGSA 310
Query: 244 YHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRD------SYVGRDF 297
+HHA L++ +R L+E+A+ L++I T TLAAGVN PA+RVI+RD S G
Sbjct: 311 FHHAGLSSTQRSLVEDAFRDRLLKVISATPTLAAGVNTPARRVIVRDWRRFDPSAGGMAP 370
Query: 298 ISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLR-FSSMMNAGPEPISSHMDP-PTLV 355
+ + QM+GRAGR GL GE+++L K + F + A PEP+ S + P L
Sbjct: 371 LDVLEVHQMMGRAGRPGLDPYGEAVLLAKGHDESQELFDRYVWADPEPVRSKLAAEPALR 430
Query: 356 DLILEVVAANLCSSLEDVKTLIKHTLF 382
+L +A+ + E + ++ TL+
Sbjct: 431 THVLATIASGFARTREGLLEFLEATLY 457
>gi|432329628|ref|YP_007247771.1| superfamily II helicase [Methanoregula formicicum SMSP]
gi|432136337|gb|AGB01264.1| superfamily II helicase [Methanoregula formicicum SMSP]
Length = 720
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 121/450 (26%), Positives = 206/450 (45%), Gaps = 40/450 (8%)
Query: 28 GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQEN--RIDEIGLIVIDEFHMLNEPQRGPI 85
G + L I + T EK + SL++ N I EI L+VIDE H+++ RGP+
Sbjct: 99 GDFDRRDDMLGNNDIIVATSEK----VDSLLRNNARWIAEITLLVIDEVHLIDSSHRGPV 154
Query: 86 LECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRV-F 144
+E V++K+ Y ++Q+ +SATIGN L+ +++ RP + V + R+ F
Sbjct: 155 VEMVIAKMRYRNPAMQVIGLSATIGNPKVLAGWLDAELVTSTWRPVDLRQGVFCNDRIHF 214
Query: 145 QSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRLQF--- 201
+ +G+ ++ + N D + L + L+F SS+ A R
Sbjct: 215 R--EGERRVKVVSKNFD------DINLCLDTIAEGGQCLVFVSSRRNAEAFAKRAAGAIK 266
Query: 202 DRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAY 261
PG KE K+ L+ + ++ L C+ G A+HHA L+ ER ++EE +
Sbjct: 267 SEDPGLKEPAKE--------LERTAETEMGKTLAACVARGAAFHHAGLSRPERAVVEEGF 318
Query: 262 LAGTLQIICCTSTLAAGVNLPAQRVIIRD-----SYVGRDFISLNMYKQMVGRAGRTGLQ 316
G ++ I T TLAAG+NLPA+RVIIRD + G I + Y QM GRAGR L
Sbjct: 319 RKGLIKCISSTPTLAAGLNLPARRVIIRDYLRFAAGEGMQPIPASEYHQMAGRAGRPRLD 378
Query: 317 ESGESIMLCKTMQDFLR-FSSMMNAGPEPISSHM-DPPTLVDLILEVVAANLCSSLEDVK 374
GE++++ K F ++A E + S + +P L +L ++A+ + ++
Sbjct: 379 PYGEAVLIAKDEGQVEELFEYYIDAPAEEVHSKIAEPNALYTHVLSLIASGFAGTRNELL 438
Query: 375 TLIKHTLFYQLKSPEDQQTFLETTLSEIVASLLASKGTMLTMNEAGHLSLTSIAKAAVQA 434
+ + + + E +Q L + L +L + E HL + +
Sbjct: 439 SFMDRSFYVH----EHRQGRLMQRAVDTALKFLVDNDMILEVGE--HLGSSEFGTLVSRL 492
Query: 435 GLSHDVCLIIYSDLLHNKLNFCLLNSLHML 464
+ +I S LH + ++ L LH++
Sbjct: 493 YIDPRSAAMIVS-TLHKESDYSDLGLLHLI 521
>gi|336252875|ref|YP_004595982.1| ski2-type helicase [Halopiger xanaduensis SH-6]
gi|335336864|gb|AEH36103.1| ski2-type helicase [Halopiger xanaduensis SH-6]
Length = 787
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 115/390 (29%), Positives = 198/390 (50%), Gaps = 31/390 (7%)
Query: 15 EFKFYLEEY---AGVK-GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE--NRIDEIGL 68
EF+ Y EE+ AGV G Y T L K I + T EK + SL++ + + ++
Sbjct: 87 EFEAY-EEFGVTAGVATGNYESTSDWLATKDIVVATSEK----VDSLVRNGADWLSDLTC 141
Query: 69 IVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVENS 128
+V DE H++++ RGP LE ++K+ L +Q A+SAT+GN + ++ +++ +
Sbjct: 142 VVSDEVHLIDDRNRGPTLEVTLAKLRKLNPDLQTVALSATVGNADEIADWLDAELVETDW 201
Query: 129 RPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSS 188
RP V + +FD S E+ + + V ++Q L+F +S
Sbjct: 202 RPIDLRMGVHYGNAL--NFDDGSTREVPVEGSEKQEAA----LVRDILQEGGSSLVFVNS 255
Query: 189 KIACSNLALRLQFDRFPGTKEYKKQEKE---DLIEALKEENDGKLSTNLEECILYGVAYH 245
+ A RL ++E +E++ +L E +++++D + S +L +C+ G A+H
Sbjct: 256 RRNAEAAARRLGK---VASRELTPEEEDQLAELAEEIRDDSDTETSKDLADCVERGSAFH 312
Query: 246 HADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRD------SYVGRDFIS 299
HA L++ +R ++E+A+ L++I T TLAAGVN PA+RVI+RD S G +
Sbjct: 313 HAGLSSTQRSIVEDAFRDRLLKVISATPTLAAGVNTPARRVIVRDWRRFDPSAGGMAPLD 372
Query: 300 LNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLR-FSSMMNAGPEPISSHMDP-PTLVDL 357
+ QM+GRAGR GL GE+++L K + F + A PEP+ S + P L
Sbjct: 373 VLEVHQMMGRAGRPGLDPYGEAVLLAKNHDESQELFDRYVWADPEPVRSKLAAEPALRTH 432
Query: 358 ILEVVAANLCSSLEDVKTLIKHTLFYQLKS 387
+L +A+ + E + ++ TL+ S
Sbjct: 433 VLATIASGFARTREGLLEFLEATLYASQSS 462
>gi|448607167|ref|ZP_21659312.1| ski2-like helicase [Haloferax sulfurifontis ATCC BAA-897]
gi|445738179|gb|ELZ89704.1| ski2-like helicase [Haloferax sulfurifontis ATCC BAA-897]
Length = 829
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 120/397 (30%), Positives = 195/397 (49%), Gaps = 35/397 (8%)
Query: 15 EFKFYLEEYA---GVK-GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQEN--RIDEIGL 68
EF+ + EEY GV G Y L+ + I + T EK + SL++ N +D++
Sbjct: 87 EFERW-EEYGIDVGVSTGNYESDGEWLSSRDIIVATSEK----VDSLVRNNAAWMDQLTC 141
Query: 69 IVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVENS 128
+V DE H++++ RGP LE ++K+ L ++Q+ A+SAT+GN ++ +++ +
Sbjct: 142 VVADEVHLVDDRHRGPTLEVTLAKLRRLNPNLQVVALSATVGNAGVVADWLDAKLVESDW 201
Query: 129 RPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNL-MVLIFCS 187
RP V V SF S E+ + DA+ +G+ L+F +
Sbjct: 202 RPIDLKMGVHYGNAV--SFADGSQREVPVGRGERQTPALVADALEGDGEGDQGSSLVFVN 259
Query: 188 SKIACSNLALRLQFDRFPGTKEY--KKQEKEDLIE---ALKEENDGKLSTNLEECILYGV 242
S+ + A R+ G E E+ DL E +++ +D + S +L + + G
Sbjct: 260 SRRNAESAARRMA-----GVTERYLTGDERSDLAELAAEIRDVSDTETSEDLAKAVAKGA 314
Query: 243 AYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRD------SYVGRD 296
A+HHA L A R L+E+A+ ++ IC T TLAAGVN P++RV++RD Y G
Sbjct: 315 AFHHAGLAAEHRTLVEDAFRDRLIKCICATPTLAAGVNTPSRRVVVRDWQRYDGDYGGMK 374
Query: 297 FISLNMYKQMVGRAGRTGLQESGESIMLCK--TMQDFLRFSSMMNAGPEPISSHMDP-PT 353
+ + QM+GRAGR GL GE+++L K +D L F + A PE + S + P
Sbjct: 375 PLDVLEVHQMMGRAGRPGLDPYGEAVLLAKDADARDEL-FERYIWADPEDVRSKLAAEPA 433
Query: 354 LVDLILEVVAANLCSSLEDVKTLIKHTLF-YQLKSPE 389
L +L VA+ + E + + TL+ Q PE
Sbjct: 434 LRTHLLATVASGFAHTREGLLEFLDQTLYATQTDDPE 470
>gi|448683206|ref|ZP_21692180.1| ski2-like helicase [Haloarcula japonica DSM 6131]
gi|445784191|gb|EMA35009.1| ski2-like helicase [Haloarcula japonica DSM 6131]
Length = 800
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 121/425 (28%), Positives = 208/425 (48%), Gaps = 26/425 (6%)
Query: 14 EEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENR--IDEIGLIVI 71
EEF+ Y + G Y L K I + T EK + SL++ + I+++ +V
Sbjct: 89 EEFEQYGLDIGVSTGNYESEGGWLADKDIVVATSEK----VDSLVRNDAPWIEDLTCVVT 144
Query: 72 DEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVENSRPT 131
DE H++++ +RGP LE ++K+ L +Q A+SATIGN AL+T+++ + RP
Sbjct: 145 DEVHLVDDGERGPTLEVTLAKLRRLNPDLQTVALSATIGNAEALATWLDAGLVDSDWRPI 204
Query: 132 KHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIA 191
+ V + DG +N + V ++ + L+F +S+
Sbjct: 205 DLQKGVHY-GQALHLEDGSQQRLSVQNNEKQTAA-----IVRDTLEDDGSTLVFVNSRRN 258
Query: 192 CSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTA 251
A RL P + ++ + D+ E +++ +D + S +L + + G A+HHA L+
Sbjct: 259 AEAAAGRLANTVRPHLTDEERAQLADIAEEIRDVSDTETSDDLADAVADGAAFHHAGLSR 318
Query: 252 GERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIR------DSYVGRDFISLNMYKQ 305
G R L+E+A+ ++++C T TLAAGVN P++RV++R S G +S+ Q
Sbjct: 319 GHRELVEDAFRDRLVKVVCATPTLAAGVNTPSRRVVVRDWRRYDGSAGGMAPLSVLEVHQ 378
Query: 306 MVGRAGRTGLQESGESIMLCKTMQDFLR-FSSMMNAGPEPISSHMDP-PTLVDLILEVVA 363
M+GRAGR GL GE++++ + + F + A PEP+ S + P L IL VA
Sbjct: 379 MMGRAGRPGLDPYGEAVLIASSHDEVDELFERYVWADPEPVRSKLAAEPALRTHILATVA 438
Query: 364 ANLCSSLEDVKTLIKHTLFYQLKSPEDQQTFLETTLSEIVASLLASKGTMLTMNEAGHLS 423
+ S E + ++ TL+ S D+ LE + +++ L + L + E G L
Sbjct: 439 SGFARSREGLLEFLEQTLY---ASQTDEGGQLERVVDDVLTYL--QRNDFLEI-EGGELD 492
Query: 424 LTSIA 428
TS+
Sbjct: 493 ATSLG 497
>gi|289191538|ref|YP_003457479.1| DEAD/DEAH box helicase domain protein [Methanocaldococcus sp.
FS406-22]
gi|288937988|gb|ADC68743.1| DEAD/DEAH box helicase domain protein [Methanocaldococcus sp.
FS406-22]
Length = 695
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 97/317 (30%), Positives = 168/317 (52%), Gaps = 18/317 (5%)
Query: 73 EFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVENSRPTK 132
E H++N+ RG LE +++K+ +IQI +SATIGN N L+ ++ V++ RP +
Sbjct: 144 EIHLINDETRGGTLEILLTKLKEF--NIQIIGLSATIGNPNELAEWLNAELIVDDWRPVE 201
Query: 133 HSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIAC 192
+ + + + G + +DN Y+L V+ V+ L+FC++K
Sbjct: 202 LKKGIYKNGIIEYINGGNKEIKAVSDNEIYNL-------VVDCVKEGGCCLVFCNTKKGA 254
Query: 193 SNLALRLQFDRFPGTKEYKKQEK--EDLIEALKEENDGKLSTNLEECILYGVAYHHADLT 250
N A +L +F +E KK ++ E+++ L E ++ L ECIL G A+HHA LT
Sbjct: 255 VNEAKKLNLKKFLTDEEKKKLKEIAEEILSIL--EPPTEMCKTLAECILNGSAFHHAGLT 312
Query: 251 AGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRD----SYVGRDFISLNMYKQM 306
R+++E A+ +++IC T TL+ G+N+P +R I++D + G +I + +Q
Sbjct: 313 YQHRKIVENAFRERLIKVICATPTLSVGINVPCRRAIVKDLTRYTNKGIRYIPIMEIQQC 372
Query: 307 VGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHM-DPPTLVDLILEVVAAN 365
+GRAGR GL GE I++ K +D+LR + PEPI S + + L +L ++A
Sbjct: 373 IGRAGRPGLDPYGEGIIVAKNDRDYLRAYQALTQKPEPIYSKLSNQAVLRTQLLGLIATG 432
Query: 366 LCSSLEDVKTLIKHTLF 382
D++ I++T +
Sbjct: 433 EIRDEYDLEWFIRNTFY 449
>gi|322371388|ref|ZP_08045937.1| ski2-like helicase [Haladaptatus paucihalophilus DX253]
gi|320548920|gb|EFW90585.1| ski2-like helicase [Haladaptatus paucihalophilus DX253]
Length = 752
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 159/647 (24%), Positives = 277/647 (42%), Gaps = 74/647 (11%)
Query: 28 GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENR--IDEIGLIVIDEFHMLNEPQRGPI 85
G Y L + I + T EK + SL++ ID++ +V DE H++N+ RGP
Sbjct: 103 GNYESDGDWLASRDIIVATSEK----VDSLVRNGAKWIDDLSCVVADEVHLVNDAHRGPT 158
Query: 86 LECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQ 145
LE ++K+ + +Q A+SAT+GN ++ +++ RP + V + +
Sbjct: 159 LEVTLAKLRRVNPDLQTVALSATVGNAGEMADWLDATLVDSTWRPIDLRKGVLYGQALH- 217
Query: 146 SFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRLQFDRFP 205
FD + E+ N + V ++ L+F +S+ A RL
Sbjct: 218 -FDDGTQQELARGNEKETAA-----LVRDTLEDGGSSLVFVNSRRNAEAAAKRLADVTKT 271
Query: 206 GTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGT 265
+ ++++ D+ + +++ +D + S +L I G A+HHA L + R L+E+A+
Sbjct: 272 HLTDDERRDLLDIADQIRDVSDTETSDDLATAIEKGAAFHHAGLASDHRSLVEDAFRDKL 331
Query: 266 LQIICCTSTLAAGVNLPAQRVIIRD------SYVGRDFISLNMYKQMVGRAGRTGLQESG 319
+++I T TLAAGVN P++RVI+RD G + + QM GRAGR GL G
Sbjct: 332 IKVISATPTLAAGVNTPSRRVIVRDWRRYDGDIGGMQPLDVLEVHQMFGRAGRPGLDPHG 391
Query: 320 ESIMLCKTMQDFLR-FSSMMNAGPEPISSHMDP-PTLVDLILEVVAANLCSSLEDVKTLI 377
E++++ K+ + F + A PEP+ S + P L IL VA+ + E++ +
Sbjct: 392 EAVLIAKSHDELQELFDQYVWADPEPVHSKLAAEPALRTHILATVASGFAGTEEELLDFL 451
Query: 378 KHTLFYQLKSPEDQQTFLETTLSEIVASLLASKGTMLTMNEAGHLSLTSIAKAAVQAGLS 437
+ TL+ + D+ LET ++ L + G L +A GL
Sbjct: 452 ERTLY---ATQTDETGRLETVTQHVLDYL----------DRNGFLERDDRLRA---TGLG 495
Query: 438 HDVCLIIYSDLLHNKLNFCLLN------SLHMLFLVIPLEYRIPSDGILLSRSKVYDRYT 491
H V + + ++ L + +L + LV R P L RS +RYT
Sbjct: 496 HRVSQLYLDPMSAAEIIDGLRDADGKPTALGLYHLV----SRTPDMYQLYLRSGDRERYT 551
Query: 492 KFHPQTLRVAEALGVTENLVALNVTGKLKDEK-KALLCRFFHACILYDVLNFDNHQKVAK 550
+ + R E LG ++ + +D + L A +L D + + ++ +
Sbjct: 552 EIAYE--REPEFLG--------HMPSEFEDNAFEDWLSALKTARLLEDWASELDEDRITE 601
Query: 551 MYGIQNSHLQNFLNVTSYFASKVYRFCEELPELWCYKQLLTDLPQ-TLMYCRAPNLRA-- 607
Y I ++ + + + R EL + +P T R R
Sbjct: 602 RYAIGPGDIRGKVETAQWLLNAAERLAAEL-----QRDDAEGIPSATTTAVREARKRVEY 656
Query: 608 -----LMDLPGVK-IG--RARQLLNAGYSSLELIARADAKEMVAKIR 646
L+DL GV+ +G RAR+L AG S + AD ++ +R
Sbjct: 657 GVEEELLDLAGVRNVGRKRARRLYEAGIESRADLREADKSVVLGALR 703
>gi|357436375|ref|XP_003588463.1| Helicase and polymerase containing protein TEBICHI [Medicago
truncatula]
gi|355477511|gb|AES58714.1| Helicase and polymerase containing protein TEBICHI [Medicago
truncatula]
Length = 1064
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 156/591 (26%), Positives = 230/591 (38%), Gaps = 106/591 (17%)
Query: 114 ALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAV- 172
A S I+ Y RP EY+ V ++ L+ D L G PD V
Sbjct: 98 ASSNCIKAALYQTEFRPVPLEEYIKVGNSIYNK--SMELSRTIPKGAD--LGGKDPDHVV 153
Query: 173 ---------------LHLV-------------QGNLMVLIFCSSKIACSNLALRLQ--FD 202
LHLV Q VLIFCSS+ C + +
Sbjct: 154 ELCNEVRNLKSQSHFLHLVIFQDEQLIFFQVVQEGQSVLIFCSSRKGCESTGRHVAKFLK 213
Query: 203 RFPGTKEYKKQEKEDLIEALK--EENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEA 260
F E D+ A+ + L LEE GVA+HHA LT ER ++E
Sbjct: 214 SFTVDINENNCEFADITSAINSLRKCPAGLDPVLEETFPAGVAFHHAGLTVEEREIVETC 273
Query: 261 YLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGRDFISLNMYKQMVGRAGRTGLQESGE 320
Y L+++ TSTLAAGVN PA+RVI R +G DFI Y QM GR
Sbjct: 274 YRKDLLRVLTATSTLAAGVNPPARRVIFRQPRIGCDFIDGTRYMQMAGR----------- 322
Query: 321 SIMLCKTMQDFLRFSSMMNAGPEPISSHM--DPPTLVDLILEVVAANLCSSLEDVKTLIK 378
+++CK Q+ + ++N P+ S + D ++ ILEVVA + + D+ ++
Sbjct: 323 -VVICKP-QELKKVMGLLNESCPPLHSCLSEDLNGMIHAILEVVAGGIVQTTNDIHRYVR 380
Query: 379 HTLFYQLKSPEDQQTFLETTLSEIVASLLASKGTMLTMNEAGHL-SLTSIAKAAVQAGLS 437
TL K FL+ S + + L NE L S T + +A+ + L
Sbjct: 381 CTLLNSTKP------FLDVIKSAQESLRWLCQRKFLEWNEDTKLYSTTPLGRASFGSSLC 434
Query: 438 HDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEYRIPSDGILLSRSKVYDRYTKFHPQT 497
+ LI+ +DL + F L + LH+++LV P+ + D Y+R+ K P
Sbjct: 435 PEESLIVLADLSREREGFVLASDLHLVYLVTPINVDVEPDW-----ESYYERFVKLSPLD 489
Query: 498 LRVAEALGVTENLVALNVTGKL-------------------------KDEKKALLCRFFH 532
V +GVTE + G D++ +CR F+
Sbjct: 490 QSVGNRVGVTEPFLMRMAHGVPVGSNKSRWSNNKRQNQHGMSSGIVNSDDQTLRVCRRFY 549
Query: 533 ACILYDVLNFDNH-QKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELWCYKQLLT 591
++ +L + +V + + + +Q FAS V FCE L W
Sbjct: 550 VALILSLLVQETPVGEVCETFKVARGMVQGLQENAGRFASMVAVFCERLG--W------H 601
Query: 592 DLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIARADAKEMV 642
D ++ L +P VK RAR L AG + IA A E+V
Sbjct: 602 DFEAEVV--------ELTTIPYVKGSRARALYKAGLRTPLAIAEASIPELV 644
>gi|20092019|ref|NP_618094.1| ski2-like helicase [Methanosarcina acetivorans C2A]
gi|24418451|sp|Q8TL39.1|HELS_METAC RecName: Full=Putative ski2-type helicase
gi|19917229|gb|AAM06574.1| helicase [Methanosarcina acetivorans C2A]
Length = 730
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 115/372 (30%), Positives = 181/372 (48%), Gaps = 32/372 (8%)
Query: 28 GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILE 87
G Y L I + T EK L+ + + + EI ++V+DE H+++ RGP LE
Sbjct: 102 GDYDRRDEGLGINDIIVATSEKTDSLLRN--ETAWMQEISVVVVDEVHLIDSADRGPTLE 159
Query: 88 CVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSF 147
++K+ + QI A+SAT+GN + L+ +++ + RPT E V D F
Sbjct: 160 VTLAKLRKMNPFCQILALSATVGNADELAAWLDAELVLSEWRPTDLMEGVFFDGTFFCK- 218
Query: 148 DGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRLQFDRFPGT 207
D + L E + +L VL ++ L+F SS+ C A + T
Sbjct: 219 DKEKLIEQPTKDEAINL-------VLDTLREGGQCLVFESSRKNCMGFAKK-------AT 264
Query: 208 KEYKK----QEKEDLI---EALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEA 260
KK ++KE L + + E ++ ++ L C+ G A+HHA LT+ R L+E
Sbjct: 265 SAVKKTLSAEDKEKLAGIADEILENSETDTASVLASCVRAGTAFHHAGLTSPLRELVETG 324
Query: 261 YLAGTLQIICCTSTLAAGVNLPAQRVIIR-----DSYVGRDFISLNMYKQMVGRAGRTGL 315
+ G +++I T TLAAG+NLPA+RVIIR S G I + YKQM GRAGR L
Sbjct: 325 FREGYVKLISSTPTLAAGLNLPARRVIIRSYRRYSSDSGMQPIPVLEYKQMAGRAGRPRL 384
Query: 316 QESGESIMLCKTMQDFL-RFSSMMNAGPEPISSHMDPP-TLVDLILEVVAANLCSSLEDV 373
GE+++L K+ ++ L F + AG E I S + L +L ++ + E++
Sbjct: 385 DPYGEAVLLAKSYEELLFLFEKYIEAGAEDIWSKLGTENALRTHVLSTISNGFARTKEEL 444
Query: 374 KTLIKHTLF-YQ 384
++ T F YQ
Sbjct: 445 MDFLEATFFAYQ 456
>gi|110666984|ref|YP_656795.1| ski2-like helicase [Haloquadratum walsbyi DSM 16790]
gi|109624731|emb|CAJ51138.1| ATP-dependent DNA helicase Hel308 [Haloquadratum walsbyi DSM 16790]
Length = 817
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 182/723 (25%), Positives = 311/723 (43%), Gaps = 89/723 (12%)
Query: 15 EFKFYLEEYA---GVK-GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENR--IDEIGL 68
EF+ + EE+ GV G Y + L + I + T EK + SLI+ + I+++G
Sbjct: 87 EFERW-EEFGVDIGVSTGNYDSSGEWLASRDIIVATSEK----VDSLIRNDAPWINQLGC 141
Query: 69 IVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVENS 128
+V DE H++N+ RGP LE + K+ ++Q+ A+SATIGN +A++ +++ +
Sbjct: 142 VVADEVHLVNDRTRGPTLEVTLGKLRQRNTALQVVALSATIGNADAIAEWLDASLVDTDW 201
Query: 129 RPTK------HSEYVTVD----KRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQG 178
RP + + +T D +RV + + + AD +L G D QG
Sbjct: 202 RPIELQIGVHYGNAITFDDATQQRVPVANGERQTPALVAD----TLAGDSEDD-----QG 252
Query: 179 NLMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECI 238
+ L+F +S+ + A RL E ++ ++ +++E +D + S L C+
Sbjct: 253 S--TLVFVNSRRNAESAARRLCDVTTSALTEKEQASLAEIAASIREVSDTETSETLATCV 310
Query: 239 LYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRD------SY 292
G A+HHA L A R L+E+A+ L+ I T TLAAGVN P++RVI+RD Y
Sbjct: 311 EKGAAFHHAGLAAEHRSLVEDAFRDRQLKCIAATPTLAAGVNTPSRRVIVRDWRRYDSEY 370
Query: 293 VGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQ--DFLRFSSMMNAGPEPISSHM- 349
G + QM+GRAGR GL GE+++L + D L F ++A E + S +
Sbjct: 371 GGMKPLDTLEVHQMMGRAGRPGLDPYGEAVLLAGDTETRDEL-FDRYIDADLESVRSKLA 429
Query: 350 DPPTLVDLILEVVAANLCSSLEDVKTLIKHTLF-YQLKSPEDQQTFLETTLSEIVAS-LL 407
P L L +A S ++ +K TL+ Q + +T +T L + + +
Sbjct: 430 SEPALRTHALATIATGFARSRTELLAFLKETLYATQTDTNGRLKTVTDTVLDYLKRNEFI 489
Query: 408 ASKGTMLTMNEAGH----LSLTSIAKAAVQAGL--SHDVCLIIYSDLLHNKLNFC----- 456
G L+ GH L L ++ A + GL + S L N
Sbjct: 490 MQDGETLSATGLGHTVSRLYLDPMSAATIIDGLRWAEKNKTTQRSALQDNSTEQATGSFQ 549
Query: 457 ----LLNSLH--------------MLFLVIPLEYRIPSDGILLSRSKVYDRYTKFHPQTL 498
L+NS H + L R P L +S +R+T+ +
Sbjct: 550 PASELVNSKHDTHQDSDESTVRYPTALGLYHLVCRTPDMYELYLKSGDKERFTQVCYE-- 607
Query: 499 RVAEALGVTENLVALNVTGKLKDEK-KALLCRFFHACILYDVLNFDNHQKVAKMYGIQNS 557
R AE LG T + + D + ++ L +L D + + ++ + Y +
Sbjct: 608 REAELLGRTPS--------EYDDVRFESWLSALKTGRLLEDWADETSEDQITEQYDVGPG 659
Query: 558 HLQNFLNVTSYFASKVYRFCEELPELWCYKQLLTDLPQTLMYCRAPNLRALMDLPGVKIG 617
++ ++ S+ + EL + + D + + L L+D+ GV
Sbjct: 660 DIRGKVDTASWLLGAAEQLAGELG---MKTKPIADARRRVEDGVRAELLDLVDIRGVGRK 716
Query: 618 RARQLLNAGYSSLELIARADAKEMVAKIRHLPLRSARNLISAAKLHFITKMDKVEAMKNL 677
RAR+L + G + A+ K ++ +R + R L +A + T MD V+ + N
Sbjct: 717 RARRLFDTGIQDSADLQTAEKKTILRALRGRRKTAERILENAGRTD--TSMDSVDEVPND 774
Query: 678 IQN 680
N
Sbjct: 775 STN 777
>gi|298707038|emb|CBJ29840.1| DEAD box helicase [Ectocarpus siliculosus]
Length = 1907
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 110/376 (29%), Positives = 166/376 (44%), Gaps = 79/376 (21%)
Query: 37 LNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYL 96
L + I +CTIEK + L+ + + + E+ +V+DE HM+ + RG ILE +++KV+
Sbjct: 181 LKQAQIAVCTIEKANGLVNRMAAADELHELSCLVVDELHMIGDGGRGQILELLLAKVVRA 240
Query: 97 KKS---------------------------IQIFAMSATIGNINALSTFIEGITYVENSR 129
+ QI MSAT+ N L+ ++ +V + R
Sbjct: 241 NRGAAVAPAVPQAETDADVGSNQPAPPRQHTQIVGMSATLSNGAELAKWLGATLHVSDFR 300
Query: 130 PTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQ----GNLMVLIF 185
P E V + V+ +G + E A S PD V+ L + V+IF
Sbjct: 301 PIPLDERVVLGMHVYDK-EGFVVREFAAPAHPQS----DPDHVVTLCRESCRAGDQVIIF 355
Query: 186 CSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYH 245
CS+K C N AL+ E I +GVA+H
Sbjct: 356 CSTKQFCHNCALK-------------------------------------ETIPHGVAFH 378
Query: 246 HADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGRDFISLNMYKQ 305
HA L ER IE+A+ +GTL ++ TSTL AGVNLPA RVI+R+ +S Y+Q
Sbjct: 379 HAGLADTERSAIEKAFRSGTLDVLAATSTLGAGVNLPAGRVILRNINAVGGGLSATSYRQ 438
Query: 306 MVGRAGRTGLQES-GESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPT-----LVDLIL 359
M GRAGR G + GE++++ R + +MNAG + S + P + L
Sbjct: 439 MAGRAGRKGAGRARGEALLIAANKGQAARATGLMNAGLAAVRSALTPTADGGTGFTRMFL 498
Query: 360 EVVAANLCSSLEDVKT 375
E V L + D++T
Sbjct: 499 EAVCGKLIRTRADLRT 514
Score = 39.3 bits (90), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 63/138 (45%), Gaps = 8/138 (5%)
Query: 519 LKDEKKALLCRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCE 578
L K+A+ R A L DV + + +VAK YG+ LQN T+ F+ V F +
Sbjct: 860 LNPAKRAV--RLVAAMALKDVSDGYHLGQVAKSYGMNKGELQNLRQSTATFSGMVASFLK 917
Query: 579 ELPELWCYKQLLTD--LPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIARA 636
EL W +L +P+ L + L LM +PG+ A L G + + + A
Sbjct: 918 EL--GWTIFLMLVKGHIPK-LSLGVSNQLLPLMQVPGMSRTEASALFQEGIVNAKSLLSA 974
Query: 637 DAKEMVAKIR-HLPLRSA 653
+ + +R ++P R+A
Sbjct: 975 SSDRVATALRINVPFRTA 992
>gi|448638861|ref|ZP_21676531.1| ski2-like helicase [Haloarcula sinaiiensis ATCC 33800]
gi|445763193|gb|EMA14396.1| ski2-like helicase [Haloarcula sinaiiensis ATCC 33800]
Length = 798
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 120/425 (28%), Positives = 208/425 (48%), Gaps = 26/425 (6%)
Query: 14 EEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENR--IDEIGLIVI 71
EEF+ Y + G Y L K I + T EK + SL++ + I+++ +V
Sbjct: 89 EEFEQYGLDIGVSTGNYESEGGWLADKDIVVATSEK----VDSLVRNDAPWIEDLTCVVT 144
Query: 72 DEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVENSRPT 131
DE H++++ +RGP LE ++K+ L +Q A+SATIGN AL+T+++ + RP
Sbjct: 145 DEVHLVDDGERGPTLEVTLAKLRRLNPDLQTVALSATIGNAEALATWLDAGLVDSDWRPI 204
Query: 132 KHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIA 191
+ V + + + S + N + V ++ + L+F +S+
Sbjct: 205 DLQKGVHYGQALH--LEDGSQQRLSVQNNEKQTAA----IVRDTLEDDGSTLVFVNSRRN 258
Query: 192 CSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTA 251
A RL P ++ + D+ E +++ +D + S +L + + G A+HHA L+
Sbjct: 259 AEAAAGRLANTVRPHLSTEERDQLADIAEEIRDVSDTETSDDLADAVADGAAFHHAGLSR 318
Query: 252 GERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIR------DSYVGRDFISLNMYKQ 305
G R L+E+A+ ++++C T TLAAGVN P++RV++R S G +S+ Q
Sbjct: 319 GHRELVEDAFRDRLVKVVCATPTLAAGVNTPSRRVVVRDWRRYDGSAGGMAPLSVLEVHQ 378
Query: 306 MVGRAGRTGLQESGESIMLCKTMQDFLR-FSSMMNAGPEPISSHMDP-PTLVDLILEVVA 363
M+GRAGR GL GE++++ + + F + A PEP+ S + P L IL VA
Sbjct: 379 MMGRAGRPGLDPYGEAVLIASSHDEVDELFERYVWADPEPVRSKLAAEPALRTHILATVA 438
Query: 364 ANLCSSLEDVKTLIKHTLFYQLKSPEDQQTFLETTLSEIVASLLASKGTMLTMNEAGHLS 423
+ S + + ++ TL+ S D LE + +++ L + L + EAG L
Sbjct: 439 SGFARSRKGLLEFLEQTLY---ASQTDDSGQLERVVDDVLTYL--QRNDFLEI-EAGELD 492
Query: 424 LTSIA 428
TS+
Sbjct: 493 ATSLG 497
>gi|448376099|ref|ZP_21559383.1| ski2-like helicase [Halovivax asiaticus JCM 14624]
gi|445658117|gb|ELZ10940.1| ski2-like helicase [Halovivax asiaticus JCM 14624]
Length = 796
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 117/385 (30%), Positives = 196/385 (50%), Gaps = 29/385 (7%)
Query: 14 EEFKFYLEEYA---GVK-GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE--NRIDEIG 67
+EF Y EE+ GV G Y T L + I + T EK + SL++ + + ++
Sbjct: 86 DEFDAY-EEFGVSVGVTTGNYESTDDWLATRDIVVATSEK----VDSLVRNGADWLSDLT 140
Query: 68 LIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVEN 127
+V DE H++++ RGP LE ++K+ L ++Q+ A+SAT+GN ++ +++ +
Sbjct: 141 CVVSDEVHLIDDRNRGPTLEVTLAKLRALNPALQVVALSATVGNAGEIADWLDAELVASD 200
Query: 128 SRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDA-VLHLVQGNLMVLIFC 186
RP V + SFD S E+ D + S DA V +V + L+F
Sbjct: 201 WRPIDLQMGVHYGNAI--SFDDGSKREVPVDGSE-----SQEDALVRDIVAEDASALVFV 253
Query: 187 SSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHH 246
+S+ A RL P + +K ++L + +++ +D + ST+L + G A+HH
Sbjct: 254 NSRRNAEAAARRLANVVAPELADEEKAALDELADDIRDVSDSETSTDLAAAVEKGGAFHH 313
Query: 247 ADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRD------SYVGRDFISL 300
A L + R L+E+A+ L++I T TLAAGVN PA+RVI+RD + G + +
Sbjct: 314 AGLASEHRSLVEDAFRDRLLKVISATPTLAAGVNTPARRVIVRDWRRFDSTAGGMTPLDV 373
Query: 301 NMYKQMVGRAGRTGLQESGESIMLCKT--MQDFLRFSSMMNAGPEPISSHMDP-PTLVDL 357
QM+GRAGR GL GE+++L K+ QD L F + A E + S + P L
Sbjct: 374 LEVHQMMGRAGRPGLDPYGEAVLLAKSHDEQDDL-FDRYIWADAEDVRSKLAAEPALRTH 432
Query: 358 ILEVVAANLCSSLEDVKTLIKHTLF 382
+L +A+ S+ + + + + TL+
Sbjct: 433 VLATIASGFASTRDGLLSFMNETLY 457
>gi|256810263|ref|YP_003127632.1| DEAD/DEAH box helicase [Methanocaldococcus fervens AG86]
gi|256793463|gb|ACV24132.1| DEAD/DEAH box helicase domain protein [Methanocaldococcus fervens
AG86]
Length = 696
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 104/323 (32%), Positives = 179/323 (55%), Gaps = 25/323 (7%)
Query: 73 EFHMLNEPQRGPILECVVSKVLYLKK-SIQIFAMSATIGNINALSTFIEGITYVENSRPT 131
E H++N+ RG LE +++K LKK +IQI +SATIGN L+ ++ V++ RP
Sbjct: 146 EIHLINDESRGGTLEILLTK---LKKFNIQIIGLSATIGNPEELANWLNAELIVDDWRPV 202
Query: 132 KHSEYVTVDKRVFQSFDGKSLTEIYADNLD--YSLTGSGPDAVLHLVQGNLMVLIFCSSK 189
+ + + + + + +G++ EI A N + Y+L V+ V+ ++FC++K
Sbjct: 203 ELKKGIYKNG-IIEFINGEN-REIKAINNNDIYNL-------VVDCVKDGGCCIVFCNTK 253
Query: 190 IACSNLALRLQFDRFPGTKEYKKQEK--EDLIEALKEENDGKLSTNLEECILYGVAYHHA 247
N A +L +F +E +K ++ E+++ L E ++ L ECIL G A+HHA
Sbjct: 254 RGAVNEAKKLNLKKFLTNEEKRKLKEVAEEILSIL--EPPTEMCKTLAECILNGSAFHHA 311
Query: 248 DLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRD--SYVGRD--FISLNMY 303
LT R+++E+A+ +++ICCT TL+ G+NLP +R I++D Y R +I +
Sbjct: 312 GLTYQHRKIVEDAFRNKLIKVICCTPTLSVGLNLPCRRAIVKDLTRYTNRGMRYIPIMEI 371
Query: 304 KQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHM-DPPTLVDLILEVV 362
+Q +GRAGR GL GE I++ K +D+LR ++ PEPI S + + L +L ++
Sbjct: 372 QQCIGRAGRLGLDPYGEGIIVAKNDRDYLRSYQVLTQKPEPIYSKLSNQAVLRTQLLGLI 431
Query: 363 AANLCSSLEDVKTLIKHTLF-YQ 384
A D++ I++T + YQ
Sbjct: 432 ATIEIRDEYDLEWFIRNTFYAYQ 454
>gi|397772205|ref|YP_006539751.1| DEAD/DEAH box helicase domain protein [Natrinema sp. J7-2]
gi|397681298|gb|AFO55675.1| DEAD/DEAH box helicase domain protein [Natrinema sp. J7-2]
Length = 791
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 170/706 (24%), Positives = 315/706 (44%), Gaps = 67/706 (9%)
Query: 15 EFKFYLEEYAGVK-----GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE--NRIDEIG 67
EF+ Y E GV G Y T L K I + T EK + SL++ + + E+
Sbjct: 87 EFEAY--ERFGVTVGVTTGNYESTSDWLATKDIVVATSEK----VDSLVRNGADWLSELT 140
Query: 68 LIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVEN 127
+V DE H++++ RGP LE ++K+ L +Q+ A+SAT+GN + ++ +++ +
Sbjct: 141 CVVSDEVHLIDDRNRGPTLEVTLAKLRKLNPRMQLVALSATVGNADEIADWLDAALVDTD 200
Query: 128 SRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCS 187
RP + V + +FD S E+ + V +++ + L+F +
Sbjct: 201 WRPIELQMGVHYGNAL--NFDDGSTREVPVQGSEKQEAA----LVRDILREDGSSLVFVN 254
Query: 188 SKIACSNLALRLQFDRFPGTKEYKKQEKEDLIE---ALKEENDGKLSTNLEECILYGVAY 244
S+ A RL T E +E+ +L E +++++D + ST+L + +G A+
Sbjct: 255 SRRNAEAAARRLGD---VSTNELTPEERTELAELADEIRDDSDTETSTDLAAAVEHGAAF 311
Query: 245 HHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRD------SYVGRDFI 298
HHA L++ +R ++E+A+ L++I T TLAAGVN PA+RVI+RD S G +
Sbjct: 312 HHAGLSSTQRSIVEDAFRDRLLKVISATPTLAAGVNTPARRVIVRDWRRFDPSAGGMAPL 371
Query: 299 SLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLR-FSSMMNAGPEPISSHMDP-PTLVD 356
+ QM+GRAGR GL GE+++L + + F + A PEP+ S + P L
Sbjct: 372 DVLEVHQMMGRAGRPGLDPYGEAVLLATSHDESEELFDRYIWAEPEPVRSKLAAEPALRT 431
Query: 357 LILEVVAANLCSSLEDVKTLIKHTLFY-QLKSPEDQQTFLETTLSEIVASLLASKGTMLT 415
+L +A+ + E + ++ TL+ Q P +T +T L + ++ + + +
Sbjct: 432 HVLATIASGFARTREGLLEFLEATLYASQSSEPGRLETVTDTVLQYLESNDFIERDSGGS 491
Query: 416 ----MNEAGHLSLTSIAKAAVQAGLSHDVCLIIYSDLLH--NKLNFCLLNSLHMLFLVIP 469
++ + TS A A G D L S L H ++L +++ ++ +
Sbjct: 492 DSAEADDGADGAFTSAADLADDGG--RDEVLEATS-LGHTVSRLYLDPMSAAEIVHGLAD 548
Query: 470 LEYRIPSDGI--LLSRS-KVYDRYTKFHPQTL-------RVAEALGVTENLVALNVTGKL 519
+ R + G+ L+SR+ +Y+ Y + R AE LG + +
Sbjct: 549 ADERPTALGLYQLVSRTPDMYELYLRSGEDEQFGELFYEREAELLG--------DAPSEF 600
Query: 520 KDEK-KALLCRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCE 578
++E+ + L +L D + +++ Y I L+ ++ +
Sbjct: 601 EEERFEDWLSALKTGKLLEDWATETDEEQLTDRYEIGPGDLRGKVDTAEWLLGAAESLAA 660
Query: 579 ELPELWCYKQLLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIARADA 638
E+ W + + + + L L+ + GV RAR+L +AG + AD
Sbjct: 661 EIDSEWTVA--VREARARIEHGVGKELLELVGVGGVGRKRARRLYDAGIEEPADLRTADK 718
Query: 639 KEMVAKIRHLPLRSARNLISAAKLHFITKMDKVEAMKNLIQNLQKN 684
++A ++ ++A N++ A + MD VE + + N
Sbjct: 719 GVILAALKG--QKTAENILENAGREDPS-MDGVEPRSDGASDGDGN 761
>gi|344210446|ref|YP_004794766.1| ski2-like helicase [Haloarcula hispanica ATCC 33960]
gi|343781801|gb|AEM55778.1| ski2-like helicase [Haloarcula hispanica ATCC 33960]
Length = 800
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 121/425 (28%), Positives = 206/425 (48%), Gaps = 26/425 (6%)
Query: 14 EEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENR--IDEIGLIVI 71
EEF+ Y + G Y L K I + T EK + SL++ + I+++ +V
Sbjct: 89 EEFEQYGLDIGVSTGNYESEGGWLADKDIVVATSEK----VDSLVRNDAPWIEDLTCVVT 144
Query: 72 DEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVENSRPT 131
DE H++++ +RGP LE ++K+ L +Q A+SATIGN AL+T+++ + RP
Sbjct: 145 DEVHLVDDGERGPTLEVTLAKLRRLNPDLQTVALSATIGNAEALATWLDAGLVDSDWRPI 204
Query: 132 KHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIA 191
+ V + DG +N + V ++ + L+F +S+
Sbjct: 205 DLQKGVHY-GQALHLEDGSQQRLSVQNNEKQTAA-----IVRDTLEDDGSTLVFVNSRRN 258
Query: 192 CSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTA 251
A RL P ++ + D+ E +++ +D + S +L + + G A+HHA L+
Sbjct: 259 AEAAAGRLANTVRPHLTAEERDQLADIAEEIRDVSDTETSDDLADAVADGAAFHHAGLSR 318
Query: 252 GERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIR------DSYVGRDFISLNMYKQ 305
G R L+E+A+ ++++C T TLAAGVN P++RV++R S G +S+ Q
Sbjct: 319 GHRELVEDAFRDRLVKVVCATPTLAAGVNTPSRRVVVRDWRRYDGSAGGMAPLSVLEVHQ 378
Query: 306 MVGRAGRTGLQESGESIMLCKTMQDFLR-FSSMMNAGPEPISSHMDP-PTLVDLILEVVA 363
M+GRAGR GL GE++++ + + F + A PEP+ S + P L IL VA
Sbjct: 379 MMGRAGRPGLDPYGEAVLIASSHDEVDELFERYVWADPEPVRSKLAAEPALRTHILATVA 438
Query: 364 ANLCSSLEDVKTLIKHTLFYQLKSPEDQQTFLETTLSEIVASLLASKGTMLTMNEAGHLS 423
+ S E + ++ TL+ S D LE + +++ L + L + E G L
Sbjct: 439 SGFARSREGLLEFLEQTLY---ASQTDDSGQLERVVDDVLTYL--QRNDFLEI-EGGELD 492
Query: 424 LTSIA 428
TS+
Sbjct: 493 ATSLG 497
>gi|55379480|ref|YP_137330.1| ski2-like helicase [Haloarcula marismortui ATCC 43049]
gi|68052079|sp|Q5UYM9.1|HELS_HALMA RecName: Full=Putative ski2-type helicase
gi|55232205|gb|AAV47624.1| putative ski2-type helicase [Haloarcula marismortui ATCC 43049]
Length = 799
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 121/425 (28%), Positives = 207/425 (48%), Gaps = 26/425 (6%)
Query: 14 EEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENR--IDEIGLIVI 71
EEF+ Y + G Y L K I + T EK + SL++ + I+++ +V
Sbjct: 89 EEFEQYGLDIGVSTGNYESEGGWLADKDIVVATSEK----VDSLVRNDAPWIEDLTCVVT 144
Query: 72 DEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVENSRPT 131
DE H++++ +RGP LE ++K+ L +Q A+SATIGN AL+T+++ + RP
Sbjct: 145 DEVHLVDDGERGPTLEVTLAKLRRLNPDLQTVALSATIGNAEALATWLDAGLVDSDWRPI 204
Query: 132 KHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIA 191
+ V + DG +N + V ++ + L+F +S+
Sbjct: 205 DLQKGVHY-GQALHLEDGSQQRLSVQNNEKQTAA-----IVRDTLEDDGSTLVFVNSRRN 258
Query: 192 CSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTA 251
A RL P ++ + D+ E +++ +D + S +L + + G A+HHA L+
Sbjct: 259 AEAAAGRLANTVRPHLSTEERDQLADIAEEIRDVSDTETSDDLADAVADGAAFHHAGLSR 318
Query: 252 GERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIR------DSYVGRDFISLNMYKQ 305
G R L+E+A+ ++++C T TLAAGVN P++RV++R S G +S+ Q
Sbjct: 319 GHRELVEDAFRDRLVKVVCATPTLAAGVNTPSRRVVVRDWRRYDGSAGGMAPLSVLEVHQ 378
Query: 306 MVGRAGRTGLQESGESIMLCKTMQDFLR-FSSMMNAGPEPISSHMDP-PTLVDLILEVVA 363
M+GRAGR GL GE++++ + + F + A PEP+ S + P L IL VA
Sbjct: 379 MMGRAGRPGLDPYGEAVLIASSHDEVDELFERYVWADPEPVRSKLAAEPALRTHILATVA 438
Query: 364 ANLCSSLEDVKTLIKHTLFYQLKSPEDQQTFLETTLSEIVASLLASKGTMLTMNEAGHLS 423
+ S + + ++ TL+ S D LE + +++ L + L + EAG L
Sbjct: 439 SGFARSRKGLLEFLEQTLY---ASQTDDSGQLERVVDDVLTYL--QRNDFLEI-EAGELD 492
Query: 424 LTSIA 428
TS+
Sbjct: 493 ATSLG 497
>gi|448648795|ref|ZP_21679860.1| ski2-like helicase [Haloarcula californiae ATCC 33799]
gi|445774539|gb|EMA25555.1| ski2-like helicase [Haloarcula californiae ATCC 33799]
Length = 798
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 120/425 (28%), Positives = 208/425 (48%), Gaps = 26/425 (6%)
Query: 14 EEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENR--IDEIGLIVI 71
EEF+ Y + G Y L K I + T EK + SL++ + I+++ +V
Sbjct: 89 EEFEQYGLDIGVSTGNYESEGGWLADKDIVVATSEK----VDSLVRNDAPWIEDLTCVVT 144
Query: 72 DEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVENSRPT 131
DE H++++ +RGP LE ++K+ L +Q A+SATIGN AL+T+++ + RP
Sbjct: 145 DEVHLVDDGERGPTLEVTLAKLRRLNPDLQTVALSATIGNAEALATWLDAGLVDSDWRPI 204
Query: 132 KHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIA 191
+ V + + + S + N + V ++ + L+F +S+
Sbjct: 205 DLQKGVHYGQALH--LEDGSQQRLSVQNNEKQTAA----IVRDTLEDDGSTLVFVNSRRN 258
Query: 192 CSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTA 251
A RL P ++ + D+ E +++ +D + S +L + + G A+HHA L+
Sbjct: 259 AEAAAGRLANTVRPHLSTEERDQLADIAEEIRDVSDTETSDDLADAVADGAAFHHAGLSR 318
Query: 252 GERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIR------DSYVGRDFISLNMYKQ 305
G R L+E+A+ ++++C T TLAAGVN P++RV++R S G +S+ Q
Sbjct: 319 GHRELVEDAFRDRLVKVVCATPTLAAGVNTPSRRVVVRDWRRYDGSAGGMAPLSVLEVHQ 378
Query: 306 MVGRAGRTGLQESGESIMLCKTMQDFLR-FSSMMNAGPEPISSHMDP-PTLVDLILEVVA 363
M+GRAGR GL GE++++ + + F + A PEP+ S + P L IL VA
Sbjct: 379 MMGRAGRPGLDPYGEAVLIASSHDEVDELFERYVWADPEPVRSKLAAEPALRTHILATVA 438
Query: 364 ANLCSSLEDVKTLIKHTLFYQLKSPEDQQTFLETTLSEIVASLLASKGTMLTMNEAGHLS 423
+ S + + ++ TL+ S D LE + +++ L + L + EAG L
Sbjct: 439 SGFARSRKGLLEFLEQTLY---ASQTDDSGQLERVVDDVLTYL--QRNDFLEI-EAGELD 492
Query: 424 LTSIA 428
TS+
Sbjct: 493 ATSLG 497
>gi|448315788|ref|ZP_21505427.1| ski2-like helicase [Natronococcus jeotgali DSM 18795]
gi|445610547|gb|ELY64317.1| ski2-like helicase [Natronococcus jeotgali DSM 18795]
Length = 781
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 123/407 (30%), Positives = 201/407 (49%), Gaps = 38/407 (9%)
Query: 14 EEFKFYLEEYAGVK-----GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE--NRIDEI 66
EEF Y E GV G Y T L K I + T EK + SL++ + + E+
Sbjct: 86 EEFAAY--ESFGVDVGVTTGNYESTSDWLATKDIVVATSEK----VDSLVRNGASWLSEL 139
Query: 67 GLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVE 126
+V DE H++++ RGP LE ++K+ L +Q A+SAT+GN + ++ +++
Sbjct: 140 TCVVSDEVHLIDDRNRGPTLEVTLAKLRRLNPDLQTVALSATVGNADEIADWLDAELVDT 199
Query: 127 NSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVL--HLVQGNLMVLI 184
+ RP V + +FD S E+ + G +A L +VQ L+
Sbjct: 200 DWRPIDLQTGVHYGNAL--NFDDGSTREVPVEG------GEKQEAALVRDIVQEGGSSLV 251
Query: 185 FCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIE---ALKEENDGKLSTNLEECILYG 241
F +S+ A RL + G +E E+ DL E ++E++D + S +L +C+ G
Sbjct: 252 FVNSRRNAEAAARRLG--QVTG-RELTDGERTDLAELAEEIREDSDTETSADLADCVERG 308
Query: 242 VAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRD------SYVGR 295
A+HHA L++ +R L+E+A+ L+ I T TLAAGVN PA+RVI+RD + G
Sbjct: 309 SAFHHAGLSSTQRSLVEDAFRDRLLKAISATPTLAAGVNTPARRVIVRDWRRFDPTAGGM 368
Query: 296 DFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLR-FSSMMNAGPEPISSHMDP-PT 353
+ + QM+GRAGR GL GE+++L K+ + F + A PE + S + P
Sbjct: 369 APLDVLEVHQMMGRAGRPGLDPYGEAVLLAKSHDESEELFDRYVWADPESVRSKLAAEPA 428
Query: 354 LVDLILEVVAANLCSSLEDVKTLIKHTLFY-QLKSPEDQQTFLETTL 399
L +L +A+ + E + ++ TL+ Q P +T ++ L
Sbjct: 429 LRTHVLATIASGFARTREGLLEFLEATLYASQSSEPGRLETVTDSVL 475
>gi|390938522|ref|YP_006402260.1| DEAD/DEAH box helicase [Desulfurococcus fermentans DSM 16532]
gi|390191629|gb|AFL66685.1| DEAD/DEAH box helicase domain protein [Desulfurococcus fermentans
DSM 16532]
Length = 711
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 118/391 (30%), Positives = 203/391 (51%), Gaps = 39/391 (9%)
Query: 10 AKAAEEF-KFYLEEYAGVK-----GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRI 63
A A+E++ +F E GV+ G Y L+ I + T E+ ++ + + +
Sbjct: 81 ALASEKYGEFKTLEALGVRVGVSTGDYDEPAEYLSWYDIIVATYERFDSILRQ--KPSWL 138
Query: 64 DEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGIT 123
++GL+V+DE HM ++P+RGPI+E + +++L ++ I+I +SATIGN AL+ ++ +
Sbjct: 139 RDVGLVVVDEIHMASDPERGPIVEVIAARLL--RQGIRIIGLSATIGNPEALAEWLNAVL 196
Query: 124 YVENSRPTKHSEYVTVDKRVFQSFDGKSLTE-IYADNLDYSLTGSGPDAVLH-LVQGNLM 181
+ RP + E K+ F ++ E + +N D L D LH +V+ L
Sbjct: 197 VNTDWRPVRLVEGYLDKKKPGLVFPVENRVESVDLENRDPFL-----DIPLHNVVELGLQ 251
Query: 182 VLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEA-LKEENDGKLSTN---LEEC 237
L+F ++ + A+ + ED ++ + E D S L +
Sbjct: 252 TLVFIHNRRKVEDYAVE--------AARHLPMLPEDAVKPFISELEDAPTSIERDVLSDL 303
Query: 238 ILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIR----DSYV 293
I GV +HHA L++ R +E+A+ + L+I+ T TLAAGVNLPA+RV++ D+
Sbjct: 304 IRRGVGFHHAGLSSIARSTVEKAFRSRLLKIVYATPTLAAGVNLPARRVLVSVKRYDASR 363
Query: 294 GRDF-ISLNMYKQMVGRAGRTGLQESGESIML-CKTMQDFLRFSSMMNAGPEPISSH-MD 350
GR IS++ YKQM GRAGR G E GES++ + + L++ +N PEP+ +
Sbjct: 364 GRRVNISISEYKQMAGRAGRPGYDEIGESVITDASSSSEALKY---INGSPEPVVGKLLS 420
Query: 351 PPTLVDLILEVVAANLCSSLEDVKTLIKHTL 381
+L +L +VA+ SS+++V ++ TL
Sbjct: 421 ERSLRIHVLSLVASGEASSIDEVSGILSFTL 451
>gi|76800898|ref|YP_325906.1| ski2-like helicase [Natronomonas pharaonis DSM 2160]
gi|121696877|sp|Q3IU46.1|HELS_NATPD RecName: Full=Putative ski2-type helicase
gi|76556763|emb|CAI48337.1| ATP-dependent DNA helicase Hel308 [Natronomonas pharaonis DSM 2160]
Length = 747
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 182/693 (26%), Positives = 302/693 (43%), Gaps = 91/693 (13%)
Query: 14 EEFKFYLEEYA---GVK-GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENR--IDEIG 67
EEF + EEY GV G Y T L K I + T EK + SL++ ID++
Sbjct: 86 EEFAAF-EEYGLSVGVTTGSYEDTGEWLADKDIIVATSEK----VDSLVRNGAPWIDDLD 140
Query: 68 LIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVEN 127
+V DE H++++ RGP LE ++K+ + ++Q+ A+SAT+GN ++ +++ +
Sbjct: 141 CVVADEVHLVDDEHRGPTLEVTLAKLRRVNPNLQVVALSATVGNAGEMAEWLDAELVDSS 200
Query: 128 SRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLH--LVQGNLMVLIF 185
RP + + V + DG L T +AV+ L +G L+F
Sbjct: 201 WRPIELRKGVHY-GQALHFGDGTQ------QELPVQRTEKPTEAVVRETLDEGG-STLVF 252
Query: 186 CSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYH 245
+S+ A RL G ++ L E ++ +D + S +L +C+ G A+H
Sbjct: 253 VNSRRNAEGAAKRLAKTTVDGLDADERAALSSLAEEIRAVSDTETSDDLADCVEQGAAFH 312
Query: 246 HADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYV------GRDFIS 299
HA ++ R L+E+A+ ++ IC T TLAAGVN PA+RV++RD G +S
Sbjct: 313 HAGCSSEHRSLVEDAFRDRLIKTICATPTLAAGVNTPARRVVVRDWRRYSGDAGGMQPLS 372
Query: 300 LNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLR-FSSMMNAGPEPISSHM-DPPTLVDL 357
+ QM+GRAGR G GE+++L + + + A PEP+ S + P++
Sbjct: 373 VLEVHQMMGRAGRPGRDPYGEAVLLADSHDELDELLDRYVWADPEPVESKLAREPSMRTH 432
Query: 358 ILEVVAANLCSSLEDVKTLIKHTLF---YQLKSPEDQ-QTFLETTLSEI-VASLLASKGT 412
+L VA+ S + + + TL+ Y+ ED + ++TTLS + + G
Sbjct: 433 LLATVASGFADSRSALLSFLDRTLYATQYRHGDGEDNLERVVDTTLSYLETNGFIDRDGD 492
Query: 413 MLTMNEAGH----LSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVI 468
+ + GH L L ++ A + GL+ L+ L
Sbjct: 493 AIEATDLGHTVSRLYLDPMSAAEIIDGLADAASPTAM--------------GLYQLVART 538
Query: 469 PLEYRIPSDGILLSRSKVYDRYTKFHPQTLRVAEALGVTENLVALNVTGKLKDEKKALLC 528
P Y L RS + YT + R AE LG L + G+ +D AL
Sbjct: 539 PDMYE------LYLRSGDREEYTMLAYE--REAELLG---ELPSEFEEGRFEDWLSALKT 587
Query: 529 RFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELWCYKQ 588
A +L D + + +A+ YG+ ++ ++ + E Q
Sbjct: 588 ----ARMLEDWASELDEDDIAERYGVGPGDIRGKVDTAEWLLGAAESLASE--------Q 635
Query: 589 LLTDLPQTLMYCRAPNLRA-------LMDLPGVK-IG--RARQLLNAGYSSLELIARADA 638
L D+ R R L+DL GV+ +G RAR+L +AG + + AD
Sbjct: 636 DLADVSA----IREARKRVEHGVGEELIDLAGVRGVGRKRARRLYDAGIETRADLRNADK 691
Query: 639 KEMVAKIRHLPLRSARNLISAAKLHFITKMDKV 671
++A +R ++A N++ AA H +MD V
Sbjct: 692 SVVLAALRGRE-QTAENVLEAAG-HQQPEMDGV 722
>gi|385802390|ref|YP_005838790.1| ATP-dependent DNA helicase Hel308 [Haloquadratum walsbyi C23]
gi|339727882|emb|CCC38992.1| ATP-dependent DNA helicase Hel308 [Haloquadratum walsbyi C23]
Length = 817
Score = 149 bits (375), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 118/393 (30%), Positives = 193/393 (49%), Gaps = 42/393 (10%)
Query: 15 EFKFYLEEYA---GVK-GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENR--IDEIGL 68
EF+ + EE+ GV G Y + L + I + T EK + SLI+ + I+++G
Sbjct: 87 EFERW-EEFGVDIGVSTGNYDSSGEWLASRDIIVATSEK----VDSLIRNDAPWINQLGC 141
Query: 69 IVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVENS 128
+V DE H++N+ RGP LE + K+ ++Q+ A+SATIGN +A++ +++ +
Sbjct: 142 VVADEVHLVNDRTRGPTLEVTLGKLRQRNTALQVVALSATIGNADAIAEWLDASLVDTDW 201
Query: 129 RPTK------HSEYVTVD----KRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQG 178
RP + + +T D +RV + + + AD +L G D QG
Sbjct: 202 RPIELQIGVHYGNAITFDDATQQRVPVANGERQTPALVAD----TLAGDSEDD-----QG 252
Query: 179 NLMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECI 238
+ L+F +S+ + A RL E ++ ++ +++E +D + S L C+
Sbjct: 253 S--TLVFVNSRRNAESAARRLCDVTTSALTEKEQASLAEIAASIREVSDTETSETLATCV 310
Query: 239 LYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRD------SY 292
G A+HHA L A R L+E+A+ L+ I T TLAAGVN P++RVI+RD Y
Sbjct: 311 EKGAAFHHAGLAAEHRSLVEDAFRDRQLKCIAATPTLAAGVNTPSRRVIVRDWRRYDSEY 370
Query: 293 VGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQ--DFLRFSSMMNAGPEPISSHM- 349
G + QM+GRAGR GL GE+++L + D L F ++A E + S +
Sbjct: 371 GGMKPLDTLEVHQMMGRAGRPGLDPYGEAVLLAGDTETRDEL-FDRYIDADLESVRSKLA 429
Query: 350 DPPTLVDLILEVVAANLCSSLEDVKTLIKHTLF 382
P L L +A S ++ +K TL+
Sbjct: 430 SEPALRTHALATIATGFARSRTELLAFLKETLY 462
>gi|403341625|gb|EJY70124.1| DNA polymerase theta subunit [Oxytricha trifallax]
Length = 1698
Score = 148 bits (374), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 134/505 (26%), Positives = 215/505 (42%), Gaps = 115/505 (22%)
Query: 42 IYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSK------VLY 95
I ICTIEK + L+ +I+E ++G +IDEFH++ + RG LE +++K ++
Sbjct: 517 IAICTIEKANSLLNRIIEERAYFDVGFFIIDEFHLILDEGRGYQLESLIAKLRTVETIMN 576
Query: 96 LKKSIQIFAMSATIGNINALSTFIEGIT--YVENSRPTKHSEYVTVDKRVF--------- 144
+KS QI MSAT+ ++ L + G Y RP SEY+ + ++F
Sbjct: 577 REKSFQIVGMSATLSGLDYLKQWFGGNCELYECQFRPVPLSEYLQIGSKLFNKEMKMIMD 636
Query: 145 -------QSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLAL 197
Q D ++ A + DY P + ++ VLIFC SK+ C +A
Sbjct: 637 LSHLPKFQMIDSNGRSQTLAADNDYL-----PLVLSSYLRKKKAVLIFCPSKVQCEQVAK 691
Query: 198 RLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLI 257
+L EY+ ++ + H+ D+ E +
Sbjct: 692 KLAAIMPTQYPEYESKQ----------------------------SLHYEDI---ETEIK 720
Query: 258 EEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGRDFISLNMYKQMVGRAGRTGLQE 317
E Y G L ++ TSTL+ G+NLPA+ V + Y+ + + YKQM GRAGRTG
Sbjct: 721 EIGYRTGALLVLAATSTLSTGINLPAKAVFFKGPYIAQMPMDAAKYKQMSGRAGRTGFDS 780
Query: 318 SGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKTLI 377
G+SIM+C T D +M + S + L+ +LE++A+N+ +S + ++ I
Sbjct: 781 KGDSIMMC-TNNDREYVLDLMKPFYCELKSALTGQRLMRSLLEIIASNVVTSFKHIRIFI 839
Query: 378 KHTLFY-------------------------------QLKSPEDQQT-FLET-------- 397
+ TL Y QL+ ++Q +LET
Sbjct: 840 QSTLKYTLCQKMRCNSCTQTYFQNEILFGVIQISDEAQLQKVQNQYNLYLETFRLEQFKD 899
Query: 398 ------------TLSEIVASLLASKGTMLTMNEA-GHLSLTSIAKAAVQAGLSHDVCLII 444
S+ V + L SK LT N A G + T + KAA + + + I
Sbjct: 900 EIQDDDCKNCMLEFSKQVVAYL-SKFKFLTFNPAEGTILPTQLGKAAFASSIPPEHGQKI 958
Query: 445 YSDLLHNKLNFCLLNSLHMLFLVIP 469
+ DL + N L LH+L+L+ P
Sbjct: 959 FEDLAQARGNLVLETDLHLLYLITP 983
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 61/127 (48%), Gaps = 3/127 (2%)
Query: 520 KDEKKALLCRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEE 579
+++K C+F+ A I+ ++L ++ ++ I+ +Q + ++ + FCE
Sbjct: 1111 EEQKLVRYCKFYMAMIMNEILKETPQNEICNIFNIKRGDIQTIQALAVNYSGMLSAFCER 1170
Query: 580 LPELWC-YKQLLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIARADA 638
L W Y LL + + + +C L LM ++ RAR L AGY ++E IA+
Sbjct: 1171 L--FWSDYSVLLMRINEKINWCVKEELLDLMQCSSLRPERARALFTAGYETIEDIAKNGE 1228
Query: 639 KEMVAKI 645
E + KI
Sbjct: 1229 IESMVKI 1235
>gi|448441950|ref|ZP_21589397.1| ski2-like helicase [Halorubrum saccharovorum DSM 1137]
gi|445688415|gb|ELZ40678.1| ski2-like helicase [Halorubrum saccharovorum DSM 1137]
Length = 818
Score = 148 bits (374), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 126/462 (27%), Positives = 215/462 (46%), Gaps = 69/462 (14%)
Query: 15 EFKFYLEEYA---GVK-GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENR--IDEIGL 68
EF+ + EE+ GV G Y L + I + T EK + SLI+ ID++
Sbjct: 87 EFERW-EEFGVTVGVSTGNYESDGEWLATRDIIVATSEK----VDSLIRNGAPWIDDLTC 141
Query: 69 IVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVENS 128
+V DE H++++P RGP LE ++K+ + +Q A+SAT+GN + ++ +++ +
Sbjct: 142 VVSDEVHLVDDPNRGPTLEVTLAKLRKVNPGLQTVALSATVGNADVIAEWLDAELVESDW 201
Query: 129 RPTKHS---------EYVTVDKRVFQSFDGKSLT-EIYADNLDYSLTGSGPDAVLHLVQG 178
RP ++ KR G+ T + AD LD G G +
Sbjct: 202 RPIDLRMGVHFGNAIDFADGSKREVPVERGEDQTARLVADALDTEEDGQGGSS------- 254
Query: 179 NLMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECI 238
L+F +S+ + A +L P + ++ + +L E ++ +D +++L + +
Sbjct: 255 ----LVFVNSRRNAESSARKLTDVTGPRLTDDERDQLRELAEEIRSGSDTDTASDLADAV 310
Query: 239 LYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRD------SY 292
G A+HHA L + +R +E+A+ ++ I T TLAAGVN PA+RVI+RD +
Sbjct: 311 EQGSAFHHAGLRSEDRARVEDAFRDRLIKCISATPTLAAGVNTPARRVIVRDWRRYDGEF 370
Query: 293 VGRDFISLNMYKQMVGRAGRTGLQESGESIML---CKTMQDFLRFSSMMNAGPEPISSHM 349
G + + QM GRAGR GL GE+++L T ++ F + A PEP+ S +
Sbjct: 371 GGMKPLDVLEVHQMCGRAGRPGLDPYGEAVLLANDADTKEEL--FERYLWADPEPVRSKL 428
Query: 350 DP-PTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQLKSPEDQQTFLETTLSEIVASLLA 408
P L +L VA+ S+ + + + + +TL+ QT E L+ + ++L
Sbjct: 429 AAEPALRTHVLATVASGFASTRDGLLSFLDNTLYA-------TQTDDEGRLAAVTDTVL- 480
Query: 409 SKGTMLTMNE-------AGHLSLTSIAKAAVQAGLSHDVCLI 443
L +NE G SLT+ G+ H V +
Sbjct: 481 ---DYLAVNEFVERDRDGGRESLTAT-------GIGHTVSRL 512
>gi|13541645|ref|NP_111333.1| ski2-like helicase [Thermoplasma volcanium GSS1]
gi|24418453|sp|Q97AI2.1|HELS_THEVO RecName: Full=Putative ski2-type helicase
gi|14325044|dbj|BAB59970.1| DNA helicase [Thermoplasma volcanium GSS1]
Length = 674
Score = 148 bits (374), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 109/371 (29%), Positives = 175/371 (47%), Gaps = 36/371 (9%)
Query: 28 GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILE 87
G Y T + + + I T EK L+ ++E+GL+VIDE HM+ + RGP LE
Sbjct: 100 GNYDDTPDFIKRYDVVILTSEKADSLMHH--DPYMMEEVGLMVIDEIHMIGDEYRGPTLE 157
Query: 88 CVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSF 147
V++ Y+ +I A+SAT+ N + ++ ++ + RP + R+F
Sbjct: 158 TVITTARYVNPETRIIALSATVSNASEIAEWLNASLIKSSFRPVPLKVGILYRNRLFLDG 217
Query: 148 DGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRLQ--FDRFP 205
D +S +I NL V V VLIF SS+ ++A L FD
Sbjct: 218 DARSDVDI---NL----------LVKETVDDGGQVLIFVSSRKRAEDMAKNLSQLFDPIN 264
Query: 206 GTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGT 265
K + E+ L E + +GV++HHA L+ +R IE+A+
Sbjct: 265 DLK-------------VSSEDANVYDDLLNEMLPHGVSFHHAGLSNEQRSFIEKAFRHRK 311
Query: 266 LQIICCTSTLAAGVNLPAQRVIIRD----SYVGRDFISLNMYKQMVGRAGRTGLQESGES 321
L++I T TLAAGVNLPA+ VI++D +G ++S KQM+GRAGR G + G
Sbjct: 312 LKVIVATPTLAAGVNLPARLVIVKDVTRYGDLGITYLSNMEVKQMIGRAGRPGYDQYGIG 371
Query: 322 IMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDL-ILEVVAANLCSSLEDVKTLIKHT 380
I+ + + ++ PEP+ S++ P V L +A L +S +++ + T
Sbjct: 372 IIYAASANSYQVVKEYISEEPEPVDSYIGKPEKVRFNTLAAIAMGLATSQVEMEEFYRST 431
Query: 381 LFYQLKSPEDQ 391
FY ++ ED+
Sbjct: 432 -FYYAQNGEDE 441
>gi|345006414|ref|YP_004809267.1| ski2-type helicase [halophilic archaeon DL31]
gi|344322040|gb|AEN06894.1| ski2-type helicase [halophilic archaeon DL31]
Length = 808
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 113/389 (29%), Positives = 187/389 (48%), Gaps = 31/389 (7%)
Query: 13 AEEFKFYLEEYA------GVK-GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENR--I 63
A E K E +A GV G Y L + I + T EK + SLI+ +
Sbjct: 81 ASEKKAEFERWAEYGVTVGVSTGNYESDGEWLGSRDIVVATSEK----VDSLIRNGAPWV 136
Query: 64 DEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGIT 123
D + +V DE H++++ RGP LE ++K+ + ++Q A+SAT+GN ++ +++
Sbjct: 137 DNLSCVVSDEVHLVDDRNRGPTLEVTLAKLRRINPTLQTVALSATVGNAPEIAEWLDAEL 196
Query: 124 YVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVL 183
+ RP + V + +F S E+ D S P V ++ L
Sbjct: 197 VDSDWRPIELKTGVHYGNAI--NFADGSQREVPVD----SGGKQTPALVDDTLEEGGSSL 250
Query: 184 IFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVA 243
+F +S+ + A RL + ++ E L E+L++ +D S +L + + G A
Sbjct: 251 VFVNSRRNAESAAARLGTVTSSHLTDEERAELRQLAESLRDVSDTATSDDLADAVTQGAA 310
Query: 244 YHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRD------SYVGRDF 297
+HHA L + R L+E A+ +++I T TLAAGVN P++RVI+RD + G
Sbjct: 311 FHHAGLASEHRDLVEGAFRDRLIKVIAATPTLAAGVNTPSRRVIVRDWRRYDSDFGGMKP 370
Query: 298 ISLNMYKQMVGRAGRTGLQESGESIMLCK---TMQDFLRFSSMMNAGPEPISSHMDP-PT 353
+ QM+GRAGR GL GE+++L TM + F + PEP+ S + P
Sbjct: 371 LDTLEIHQMMGRAGRPGLDPYGEAVLLASNNDTMDEL--FERYIWGEPEPVRSKLAAEPA 428
Query: 354 LVDLILEVVAANLCSSLEDVKTLIKHTLF 382
L +L VA+ +S ED+ + + +TL+
Sbjct: 429 LRTHLLATVASGFANSREDLLSFLDNTLY 457
>gi|167521806|ref|XP_001745241.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163776199|gb|EDQ89819.1| predicted protein [Monosiga brevicollis MX1]
Length = 438
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 104/355 (29%), Positives = 176/355 (49%), Gaps = 35/355 (9%)
Query: 1 MVHEKYQSLAKAA------EEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLI 54
+VHE+ +L + A E F +E YAG G+ PP R+ ++SI++ T EK + L+
Sbjct: 61 LVHERAMALEQLALRLQRDERPPFCVELYAGAAGKVPPLNRR-ERRSIFVATYEKATALL 119
Query: 55 GSLIQENRIDEIGLIVIDEFHMLNEP-QRGPILECVVSKVLYLKKS--IQIFAMSATIGN 111
IQ+ I+ GL+V+DE HM+ RG LE +S + L + +Q+ AMSATI N
Sbjct: 120 SFCIQDRSINRFGLVVVDEVHMIGAAGHRGASLEVSLSILAALAPTTRLQLTAMSATISN 179
Query: 112 INALSTFIEGITYVENSRPTKHSEYVTVDKRV--------FQSFDGKSLTEIYADNLDYS 163
+ L+ F+ + + +RP E+V VD + + + L + S
Sbjct: 180 ASQLARFLRAKLHQDVTRPVDLHEHVVVDGVITPLAQFIQVPAATTQCLGRRIIPRVRES 239
Query: 164 LTGSGPDAVLHLVQGNL-MVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEA- 221
+ L++ + L+F ++ C +A ++ + + Q+ ++
Sbjct: 240 RHSEDVQTIASLMRRHEGQTLVFLRTRRGCEAMAQQV--------AQLQCQDASLPLQPS 291
Query: 222 -------LKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTST 274
L EE L ++ +A+HHA L+ +R L+E AY + + CT+T
Sbjct: 292 PACAQLFLDEEVTFDARIPLHALLVQRLAFHHAGLSLEDRALVEAAYRRNLVDALFCTTT 351
Query: 275 LAAGVNLPAQRVIIRDSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQ 329
LAAGVNLPA+ VI++D G ++ Y+QM+GRAGRTGL ++G++ ++ Q
Sbjct: 352 LAAGVNLPARTVILKDLQTGMRRVTKGDYQQMIGRAGRTGLAQAGDAYLILSATQ 406
>gi|212224494|ref|YP_002307730.1| ski2-like helicase [Thermococcus onnurineus NA1]
gi|212009451|gb|ACJ16833.1| DNA helicase [Thermococcus onnurineus NA1]
Length = 726
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 171/657 (26%), Positives = 279/657 (42%), Gaps = 68/657 (10%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLI--GSLI 58
+ EKY+ +E++ A G Y T L + I + T EK L+ GS
Sbjct: 80 LAEEKYREF----KEWEVLGLRVAATTGDYDSTDEWLGRYDIIVATAEKFDSLLRHGS-- 133
Query: 59 QENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTF 118
+ I ++ L+V DE H++ RG LE ++S +L QI A+SAT+GN L+ +
Sbjct: 134 --SWIKDVKLVVADEVHLIGSYDRGATLEMILSHML---GRAQILALSATVGNAEELAEW 188
Query: 119 IEGITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQG 178
+ V N RP + + V +F DGK + Y N D SL + V+
Sbjct: 189 LNAELVVSNWRPVQLRKGVFAQGELFWE-DGK--IDRYPANWD-SLA-------IDAVKR 237
Query: 179 NLMVLIFCSSKIACSNLALRLQFDRFPG-TKEYKKQEKEDLIEALKEENDGKLSTNLEEC 237
LIF +++ + A+ L P + K E+ L E + L++
Sbjct: 238 GKQALIFVNTRRSAEKEAVSLA----PKIARLLTKPEQRGLKELADSLESNPTNEKLKKA 293
Query: 238 ILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGRDF 297
+ GVA+HHA L+ ER +IE+A+ G +++I T TL+AG+NLPA RVIIRD+ +F
Sbjct: 294 LRGGVAFHHAGLSRTERTMIEDAFREGLIKVITATPTLSAGLNLPAFRVIIRDTKRYSNF 353
Query: 298 ISLNM----YKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHM-DPP 352
+++ +QM+GRAGR + GE+I++ +T + PE + S + +
Sbjct: 354 GWVDIPVLEIQQMMGRAGRPKYDKVGEAIIVARTEDPKKLMDRYVFGKPEKLFSMLANES 413
Query: 353 TLVDLILEVVAANLCSSLEDVKTLIKHTLFYQLKSPEDQQTFLETTLSEIVASLLASKGT 412
IL ++ + ++ ++ T ++ +S + LE EIV L+ ++
Sbjct: 414 AFRGQILALITNFGVENFRELINFLEKTFYFYQRS---DTSHLEWKAKEIVYFLIENE-- 468
Query: 413 MLTMNEAGHLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKL---NFCLLNSLHMLFLVIP 469
+ M+ + Q +Y D L K F L F +
Sbjct: 469 FIDMDIEDRFIALPFGRRTSQ----------LYIDPLTAKKFKDAFPKLEKNPNPFGIFQ 518
Query: 470 LEYRIPSDGILLSRSKVYDRYTKFHPQTLRVAEALGVTENLVALNVTGKLKDEKKALLCR 529
L P G L +R K + Y A + E L +N+ ++ L
Sbjct: 519 LIASTPDMGTLNARRKEMEDYLDL---------AYEMEEKLY-VNIPYWEDYRFQSFLNE 568
Query: 530 FFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFAS---KVYRFCEELPELWCY 586
A IL D +N ++ Y I L L + + ++Y+ E ++ Y
Sbjct: 569 VKTAKILLDWINEVPETRIYDTYNIDPGDLYRILELADWLMYSLIELYKLFEPKKDVLDY 628
Query: 587 KQLLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIARADAKEMVA 643
L DL L + L L+ LP + RAR L NAG+ + E I RA E++A
Sbjct: 629 ---LRDLHLRLKHGVREELLELVRLPNIGRKRARALYNAGFRTTEDIMRAKVSELLA 682
>gi|448420158|ref|ZP_21580938.1| superfamily ii helicase [Halosarcina pallida JCM 14848]
gi|445674048|gb|ELZ26600.1| superfamily ii helicase [Halosarcina pallida JCM 14848]
Length = 645
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 118/402 (29%), Positives = 183/402 (45%), Gaps = 36/402 (8%)
Query: 28 GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILE 87
G + T L I + T EK I + + ++ + +V+DE H+L RGP LE
Sbjct: 97 GDFDATDEDLAGNDIVVATAEKVDSAIRT--GASWVESLACVVVDEVHLLGSDGRGPTLE 154
Query: 88 CVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSF 147
++ + +QI A+SAT+ N ++ +++ RP V D V F
Sbjct: 155 VTLATLQRRAPGLQIVALSATVDNPEDIADWLDAELVETTWRPVSLRTGVYADGDV--RF 212
Query: 148 DGKSLTEIYADNLDYSLTGSGPDA--------VLHLVQGNLMVLIFCSSKIACSNLALRL 199
D +S + D G D V V L F S+ +LA RL
Sbjct: 213 DDESTLAV-----DVEAPGPNEDGATEATAALVADAVDDGGQCLAFVRSRREAESLARRL 267
Query: 200 QFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEE 259
+ E L +A+ E + T L + + GVA+HHA + + R L+E
Sbjct: 268 AMEPLADCPE--------LADAVSELGRTETGTRLADAVESGVAFHHAGVRSSHRALVEN 319
Query: 260 AYLAGTLQIICCTSTLAAGVNLPAQRVIIRD--SYVGRDFISLNMYK--QMVGRAGRTGL 315
A+ TL++IC T TLAAGVN+PA+RV++RD Y G + L + + QM GRAGR L
Sbjct: 320 AFRERTLKVICATPTLAAGVNVPARRVVVRDLKRYTGEEMAWLPVLEVHQMCGRAGRPHL 379
Query: 316 QESGESIMLCKTMQDFLR---FSSMMNAGPEPISSHMDP-PTLVDLILEVVAANLCSSLE 371
GE+++L + D + + AGPE + S + L +L VVA+ S E
Sbjct: 380 DPYGEAVLLAEGDDDAAVAELWDRYVTAGPEAVESKLAARDALRTHVLSVVASGFADSQE 439
Query: 372 DVKTLIKHTLFYQLKSPE-DQQTFLETTLSEIVA-SLLASKG 411
V L+ T F+ +SP+ D + + + E+V +LA+ G
Sbjct: 440 SVLDLLDAT-FFAHQSPDVDLTRLVGSVVEELVGMEMLAAGG 480
>gi|374629195|ref|ZP_09701580.1| ski2-type helicase [Methanoplanus limicola DSM 2279]
gi|373907308|gb|EHQ35412.1| ski2-type helicase [Methanoplanus limicola DSM 2279]
Length = 787
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 111/400 (27%), Positives = 190/400 (47%), Gaps = 34/400 (8%)
Query: 37 LNKKSIYICTIEKGSKLIGSLIQEN--RIDEIGLIVIDEFHMLNEPQRGPILECVVSKVL 94
L + I I T EK + SL++ + + +V+DE H+++ P RG LE V++K+
Sbjct: 108 LGRNEIIIATSEK----VDSLLRNGAGWMKSVSCLVLDEAHLIDSPDRGATLEMVITKLR 163
Query: 95 YLKKSIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTE 154
YL +QI A++ATIGN + ++ + RP E + +F + K +T
Sbjct: 164 YLNPEMQIIALTATIGNPRVFAGWLNATLVKSDWRPVDLKEGIFYRNSIFFGEELKEITP 223
Query: 155 IYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQE 214
+ + D +L L ++ L+F +S+ + A R+ + + E
Sbjct: 224 V-TKHEDVNL-------CLDCIKDGGQCLVFVNSRRNAESFAKRMA-----QALKTENTE 270
Query: 215 KEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTST 274
+L + L+ D ++ L C YG A+HHA + +R +IEE + G +++I T T
Sbjct: 271 LSELKKKLEAVADTEMGKTLAVCAGYGAAFHHAGMKREQRAVIEENFRNGNIKVISSTPT 330
Query: 275 LAAGVNLPAQRVIIRD-----SYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQ 329
LAAG+NLPA+RV+IRD S G I + Y+QM GRAGR L GE++++ K+ +
Sbjct: 331 LAAGLNLPARRVVIRDYLRFKSGEGMQPIPVREYRQMAGRAGRPHLDPYGEAVLIAKSEE 390
Query: 330 DFLR-FSSMMNAGPEPISSHMDPP-TLVDLILEVVAANLCSSLEDVKTLIKHTLFYQLKS 387
+ + A E + S +D L +L +++ + ++ + T + L
Sbjct: 391 AGAGLYEEFIEAPAEDVKSRLDDNYVLTGQVLSLISTGFVKNERELAEFLDRTFYRYLNR 450
Query: 388 PEDQQTFLETTLSEIV-----ASLLASKGTMLTMNEAGHL 422
LE TL EI+ + ++ S G L+ E G L
Sbjct: 451 ---SMKHLEETLEEIIDFLVSSGMITSIGDCLSATEYGSL 487
>gi|313125008|ref|YP_004035272.1| superfamily ii helicase [Halogeometricum borinquense DSM 11551]
gi|448287414|ref|ZP_21478626.1| ski2-like helicase [Halogeometricum borinquense DSM 11551]
gi|312291373|gb|ADQ65833.1| superfamily II helicase [Halogeometricum borinquense DSM 11551]
gi|445572294|gb|ELY26835.1| ski2-like helicase [Halogeometricum borinquense DSM 11551]
Length = 841
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 111/389 (28%), Positives = 193/389 (49%), Gaps = 39/389 (10%)
Query: 15 EFKFYLEEYA---GVK-GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENR--IDEIGL 68
EF+ + EE+ GV G Y + L + I + T EK + SLI+ N ++++
Sbjct: 87 EFERW-EEFGIDVGVSTGNYDSSGEWLASRDIIVATSEK----VDSLIRNNAPWVEDLSC 141
Query: 69 IVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVENS 128
+V DE H++N+ RGP LE + K+ + +Q+ A+SAT+GN + ++ +++ T VE
Sbjct: 142 VVSDEVHLVNDGHRGPTLEVTLGKLRKINPGLQVVALSATVGNADDVAAWLDA-TLVE-- 198
Query: 129 RPTKHSEYVTVDKRVFQ------SFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMV 182
SE+ +D ++ SFD + E+ D V ++ +
Sbjct: 199 -----SEWRPIDLKMGVHYGNAISFDDGTQREVPVGKGDRKTAA----LVADTLEEDGSS 249
Query: 183 LIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGV 242
L+F +S+ A RL+ + ++ + +L + +++ +D + S L C+ G
Sbjct: 250 LVFVNSRRNAEAAAKRLKDVTSRALTDEERSKLAELAQEIRDVSDAETSDTLANCVAKGA 309
Query: 243 AYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRD------SYVGRD 296
A+HHA L A R L+E+A+ ++ + T TLAAGVN P++RVI+RD + G
Sbjct: 310 AFHHAGLAAEHRSLVEDAFRDRLVKTVSATPTLAAGVNTPSRRVIVRDWRRYDGEFGGMK 369
Query: 297 FISLNMYKQMVGRAGRTGLQESGESIMLCK--TMQDFLRFSSMMNAGPEPISSHMDP-PT 353
+ + QM+GRAGR GL GE+++L K +D L F + A EP+ S + P
Sbjct: 370 PLDVLEVHQMMGRAGRPGLDPYGEAVLLAKDSDTRDEL-FERYIWADAEPVRSKLAAEPA 428
Query: 354 LVDLILEVVAANLCSSLEDVKTLIKHTLF 382
L +L +A+ + E + + TL+
Sbjct: 429 LRTHLLATIASGFAHTREGLLDFLDQTLY 457
>gi|154151997|ref|YP_001405615.1| ski2-like helicase [Methanoregula boonei 6A8]
gi|226740606|sp|A7IB61.1|HELS_METB6 RecName: Full=Putative ski2-type helicase
gi|154000549|gb|ABS56972.1| DEAD/DEAH box helicase domain protein [Methanoregula boonei 6A8]
Length = 723
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 105/355 (29%), Positives = 171/355 (48%), Gaps = 25/355 (7%)
Query: 37 LNKKSIYICTIEKGSKLIGSLIQEN--RIDEIGLIVIDEFHMLNEPQRGPILECVVSKVL 94
L K I + T EK + SL++ I +I L+VIDE H+++ P RGP LE V++K+
Sbjct: 108 LGKNDIIVATSEK----VDSLLRNGARWIPDITLVVIDEIHLIDSPDRGPTLEMVIAKMR 163
Query: 95 YLKKSIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTE 154
+Q+ +SATIGN L+ +++ + RP + V D R+ + + + +
Sbjct: 164 SKNPGMQLIGLSATIGNPKVLAGWLDAELVTSSWRPVDLRQGVFYDNRIQFAERMRPVKQ 223
Query: 155 IYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQE 214
+ + D +L L + L+F SS+ A R G + +
Sbjct: 224 VSKNYDDLNL-------CLDTIAEGGQCLVFVSSRRNAEAFA-----KRAAGAIKSEDAA 271
Query: 215 KEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTST 274
E L E ++ L C+ G A+HHA L+ ER ++EEA+ L+ I T T
Sbjct: 272 LAACAERLLEGTPTEMVKTLAACVAKGAAFHHAGLSRKERSIVEEAFRKNLLKCISSTPT 331
Query: 275 LAAGVNLPAQRVIIRD-----SYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQ 329
LAAG+NLPA+RVIIRD + G I ++ Y+QM GRAGR L GE++++ K +
Sbjct: 332 LAAGLNLPARRVIIRDYLRFSAGEGMQPIPVSEYRQMAGRAGRPRLDPYGEAVLIAKEAE 391
Query: 330 DFLR-FSSMMNAGPEPISSHMDPPT-LVDLILEVVAANLCSSLEDVKTLIKHTLF 382
F + A E + S + PT L +L +VA+ + ++ + + +
Sbjct: 392 QVPELFEVYIEAEAEDVHSRIAEPTALYTHVLSLVASGFAGTRGELTEFMNRSFY 446
>gi|448357046|ref|ZP_21545753.1| ski2-like helicase [Natrialba chahannaoensis JCM 10990]
gi|445650219|gb|ELZ03145.1| ski2-like helicase [Natrialba chahannaoensis JCM 10990]
Length = 803
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 118/393 (30%), Positives = 196/393 (49%), Gaps = 37/393 (9%)
Query: 15 EFKFYLEEYA---GVK-GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE--NRIDEIGL 68
EF Y EE+ GV G Y T L K I + T EK + SL++ + + ++
Sbjct: 87 EFDAY-EEFGVTTGVATGNYESTSEWLATKDIIVATSEK----VDSLVRNGADWLSDLTC 141
Query: 69 IVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVENS 128
+V DE H++++ RGP LE ++K+ L +Q+ A+SAT+GN + L+ +++ +
Sbjct: 142 VVSDEVHLIDDRNRGPTLEVTLAKLRRLNPQLQVVALSATVGNADELADWLDADLVDTDW 201
Query: 129 RPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVL--HLVQGNLMVLIFC 186
RP V + +FD E+ + G +A L +++ L+F
Sbjct: 202 RPIDLQMGVHYGNAL--NFDDGETREVPVE------AGEKQEAALVRDILEEGGSSLVFV 253
Query: 187 SSKIACSNLALRL-QFDRFPGTKEYKKQEKEDLIE---ALKEENDGKLSTNLEECILYGV 242
+S+ A RL Q ++E E+ DL E ++E++D + S +L +C+ G
Sbjct: 254 NSRRNAEAAARRLGQV----SSRELTAGEQSDLAELAAEIREDSDTETSQDLADCVERGS 309
Query: 243 AYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRD------SYVGRD 296
A+HHA L++ +R L+E+A+ L++I T TLAAGVN PA+RVI+RD S G
Sbjct: 310 AFHHAGLSSTQRSLVEDAFRDRLLKVISATPTLAAGVNTPARRVIVRDWRRFDPSAGGMA 369
Query: 297 FISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLR-FSSMMNAGPEPISSHMDP-PTL 354
+ + QM+GRAGR GL GE+++L K + F + A PEP+ S + P L
Sbjct: 370 PLDVLEIHQMMGRAGRPGLDPYGEAVLLAKNHDESQELFDRYVWAEPEPVRSKLAAEPAL 429
Query: 355 VDLILEVVAANLCSSLEDVKTLIKHTLFYQLKS 387
+L +A+ + + ++ TL+ S
Sbjct: 430 RTHVLATIASGFARTRAGLLEFLEATLYASQSS 462
>gi|448401344|ref|ZP_21571580.1| ski2-like helicase [Haloterrigena limicola JCM 13563]
gi|445666607|gb|ELZ19266.1| ski2-like helicase [Haloterrigena limicola JCM 13563]
Length = 787
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 118/416 (28%), Positives = 202/416 (48%), Gaps = 25/416 (6%)
Query: 30 YPPTKRQLNKKSIYICTIEKGSKLIGSLIQENR--IDEIGLIVIDEFHMLNEPQRGPILE 87
Y T L K I + T EK + SL++ + ++ +V DE H++++ RGP LE
Sbjct: 105 YESTSDWLATKDIVVATSEK----VDSLVRNGAEWLSDLTCVVSDEVHLIDDRNRGPTLE 160
Query: 88 CVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSF 147
++K+ L +Q A+SAT+GN + ++ +++ + RP V + +F
Sbjct: 161 VTLAKLRQLNPGLQTVALSATVGNADEIADWLDAELVDTDWRPIDLQMGVHYGNAL--NF 218
Query: 148 DGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRLQ-FDRFPG 206
D S E+ + + V +++ L+F +S+ A RL R
Sbjct: 219 DDGSTREVPVEGSEKQEAA----LVRDILEEGGSSLVFVNSRRNAEAAAKRLGGVSRNEL 274
Query: 207 TKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTL 266
T E + + E L +++++D + S +L +C+ G A+HHA L++ +R L+E+A+ L
Sbjct: 275 TAEEEAKLAE-LAADIRDDSDTETSRDLADCVERGAAFHHAGLSSTQRSLVEDAFRDRLL 333
Query: 267 QIICCTSTLAAGVNLPAQRVIIRD------SYVGRDFISLNMYKQMVGRAGRTGLQESGE 320
++I T TLAAGVN PA+RVI+RD S G + + QM+GRAGR GL GE
Sbjct: 334 KVISATPTLAAGVNTPARRVIVRDWRRFDPSAGGMAPLDVLEVHQMMGRAGRPGLDPYGE 393
Query: 321 SIMLCKTMQDFLR-FSSMMNAGPEPISSHMDP-PTLVDLILEVVAANLCSSLEDVKTLIK 378
+++L K + F + A PEP+ S + P L +L +A+ + E + ++
Sbjct: 394 AVLLAKNHDESQELFDRYIWADPEPVRSKLAAEPALRTHVLATIASGFARTREGLLEFLE 453
Query: 379 HTLF-YQLKSPEDQQTFLETTLSEIVASLLASK--GTMLTMNEAGHLSLTSIAKAA 431
TL+ Q P +T +T L + ++ + G +AG + TS A A
Sbjct: 454 ATLYASQSTEPGRLETVTDTVLEYLESNDFIERDSGGSDDSEDAGGEAFTSAADLA 509
>gi|448573726|ref|ZP_21641209.1| ski2-like helicase [Haloferax lucentense DSM 14919]
gi|448597876|ref|ZP_21654801.1| ski2-like helicase [Haloferax alexandrinus JCM 10717]
gi|445718632|gb|ELZ70322.1| ski2-like helicase [Haloferax lucentense DSM 14919]
gi|445739337|gb|ELZ90846.1| ski2-like helicase [Haloferax alexandrinus JCM 10717]
Length = 827
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 120/396 (30%), Positives = 194/396 (48%), Gaps = 33/396 (8%)
Query: 15 EFKFYLEEYA---GVK-GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENR--IDEIGL 68
EF+ + EEY GV G Y L+ + I + T EK + SL++ N +D++
Sbjct: 87 EFERW-EEYGIDVGVSTGNYESDGEWLSSRDIIVATSEK----VDSLVRNNAAWMDQLTC 141
Query: 69 IVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVENS 128
+V DE H++++ RGP LE ++K+ L ++Q+ A+SAT+GN +S +++ +
Sbjct: 142 VVADEVHLVDDRHRGPTLEVTLAKLRRLNTNLQVVALSATVGNAGVVSDWLDAELVKSDW 201
Query: 129 RPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNL-MVLIFCS 187
RP V V SF S E+ + DA+ +G+ L+F +
Sbjct: 202 RPIDLKMGVHYGNAV--SFADGSQREVPVGRGERQTPALVADALEGDGEGDQGSSLVFVN 259
Query: 188 SKIACSNLALRLQFDRFPGTKEY-KKQEKEDLIE---ALKEENDGKLSTNLEECILYGVA 243
S+ + A R+ T+ Y E+ DL E +++ +D + S +L + G A
Sbjct: 260 SRRNAESAARRMA----DVTERYLTGDERSDLAELAAEIRDVSDTETSDDLANAVAKGAA 315
Query: 244 YHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRD------SYVGRDF 297
+HHA L A R L+E+A+ ++ IC T TLAAGVN P++RV++RD Y G
Sbjct: 316 FHHAGLAAEHRTLVEDAFRDRLIKCICATPTLAAGVNTPSRRVVVRDWQRYDGDYGGMKP 375
Query: 298 ISLNMYKQMVGRAGRTGLQESGESIMLCK--TMQDFLRFSSMMNAGPEPISSHMDP-PTL 354
+ + QM+GRAGR GL GE+++L K +D L F + A E + S + P L
Sbjct: 376 LDVLEVHQMMGRAGRPGLDPYGEAVLLAKDADARDEL-FERYIWADAEDVRSKLAAEPAL 434
Query: 355 VDLILEVVAANLCSSLEDVKTLIKHTLF-YQLKSPE 389
+L VA+ + E + + TL+ Q PE
Sbjct: 435 RTHLLATVASGFAHTREGLLEFLDQTLYATQTDDPE 470
>gi|14591093|ref|NP_143168.1| ski2-like helicase [Pyrococcus horikoshii OT3]
gi|18202084|sp|O59025.1|HELS_PYRHO RecName: Full=Putative ski2-type helicase
gi|3257700|dbj|BAA30383.1| 715aa long hypothetical protein [Pyrococcus horikoshii OT3]
Length = 715
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 180/658 (27%), Positives = 292/658 (44%), Gaps = 84/658 (12%)
Query: 10 AKAAEEFK-FYLEEYAGVK-----GQYPPTKRQLNKKSIYICTIEKGSKLI--GSLIQEN 61
A A E+FK F E G+K G Y L I I T EK L+ GS +
Sbjct: 79 ALAEEKFKEFKDWEELGLKVAMATGDYDSKDEWLGGYDIIIATAEKFDSLLRHGS----S 134
Query: 62 RIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEG 121
I + ++V+DE H++ RG LE +++++L QI +SATIGN L+ ++
Sbjct: 135 WIRNVKVLVVDEIHLIGSRDRGATLEFIITQML---NRAQIIGLSATIGNPEELAEWLNA 191
Query: 122 ITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLM 181
+ RP K V VF DGK TE + S + V ++ +
Sbjct: 192 KLIKSDWRPVKLRRGVFYQGFVFWE-DGK--TEKF---------NSWEELVYDAIKRSKG 239
Query: 182 VLIFCSSKIACSNLALRL--QFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECIL 239
L+F + + AL L + F KE + E ++L E+L EEN + L + +
Sbjct: 240 SLVFVNMRRKAEKTALELSKKIRNFLTKKELR--ELKELAESL-EEN--PTNEKLAKALQ 294
Query: 240 YGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSY----VGR 295
GVA+HHA L ER L+EE + G ++++ T TL+AG+N PA RVI+RD++ G
Sbjct: 295 GGVAFHHAGLGREERVLVEENFKKGLIKVVVATPTLSAGINTPAFRVIVRDTWRYSEFGM 354
Query: 296 DFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHM-DPPTL 354
+ I + +QM+GRAGR E GE+I++ T + + PE + S + + L
Sbjct: 355 ERIPILEIQQMMGRAGRPKYDEVGEAIIVSTTEEPSTVMERYIKGKPEKLFSQLSNESIL 414
Query: 355 VDLILEVVAANLCSSLEDVKTLIKHTLF-YQLKSPEDQQTFLETTLSEIVASLLASKGTM 413
IL ++A SS ++ ++ T + YQ K P LE + +IV LL ++
Sbjct: 415 RGQILALIATFNFSSFREIYDFLERTFYAYQGKDP----YTLEDRIRDIVYFLLENEFIE 470
Query: 414 LTMNEAGHLSLTSIAKAAVQAGLSHD-VCLIIYSDLLHN-KLNFCLLNSLHMLFL---VI 468
+T+++ + ++ A L D + I+ D L + + L LH++ L +I
Sbjct: 471 ITLDD----EIKALPLGIRTAKLYIDPMTAKIFKDTLPKIEKDPNPLGILHVISLTPDLI 526
Query: 469 PLEYRIPSDGILLSRSKVYDRYTKFHPQTLRVAEALGVTENLVALNVTGKLKDEKKALLC 528
PL Y +L D Y F + L +DE+K L
Sbjct: 527 PLPYGKKELPML------EDEYYSFKDR----------------LYFELDWEDERKFLRA 564
Query: 529 RFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELWCYKQ 588
F A +L +N ++ + + ++ + + + VY +E+ + Y Q
Sbjct: 565 -FKTALVLNAWINEVPEGEIVEKFNVEPGDIYRIVETAEWL---VYS-LKEIAKTLEYSQ 619
Query: 589 LLTDLPQTLMYCRAPNLR----ALMDLPGVKIGRARQLLNAGYSSLELIARADAKEMV 642
+ + +TL +R LM+LP + RAR L NAG+ LE I A E++
Sbjct: 620 DVINYLETLRVRVKHGIREELIPLMELPMIGRKRARALYNAGFRDLESIKNARPAELL 677
>gi|66358840|ref|XP_626598.1| DEXDc+HELICc, mus308/POLQ like SFII DNA helicase, no polymerase
domain [Cryptosporidium parvum Iowa II]
gi|46227703|gb|EAK88623.1| DEXDc+HELICc, mus308/POLQ like SFII DNA helicase, no polymerase
domain [Cryptosporidium parvum Iowa II]
Length = 1154
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 162/588 (27%), Positives = 264/588 (44%), Gaps = 115/588 (19%)
Query: 1 MVHEKYQSLAKAAEEF-KFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQ 59
+V EK S KA E + E+ G P + + I + TIEK + LI IQ
Sbjct: 196 LVSEKRDSYYKAGGEVCGLRISEFH--YGSKSPLFEEFD---IGVATIEKANALISYYIQ 250
Query: 60 ENRI-DEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKK------SIQIFAMSATIGNI 112
+ +G+I++DE H+L + QRG ILE +++KV L K +IQI MSAT+ N+
Sbjct: 251 HGILFKRLGIIIVDELHLLGDEQRGYILEVMLTKVRLLSKLQGEGRTIQIVGMSATLPNL 310
Query: 113 NALSTFIEGITYVENSRPTKHSEYVTVDKRVF--------QSFDGKSLTEIYA------- 157
+ +++ + Y N RP E++ + + + +S G S+ + +
Sbjct: 311 RDIGLWLDAVVYQSNFRPVPLREHIVIKGKAYIKPGKDQNKSTLGSSVQDTLSKVMSWDF 370
Query: 158 -------DNLDYSLTGSGP--------DAVLHLVQG------NLMVLIFCSSKIACSNLA 196
++ D+ + G D LV G VL+FC SK + + A
Sbjct: 371 HQVNSKFNSTDFDIDQIGSSRWKYPIVDMSELLVIGWEALKKGESVLVFCPSKYSVESTA 430
Query: 197 L------RLQF----------DRFPGTKEYKKQEKEDLIEALKEENDGKLS-------TN 233
L + QF +R + + E++ + A + + LS
Sbjct: 431 LFFANCIKRQFCEGIDIENCSNRQQIMQSLRSVERQRYMLAEEIRQNSSLSKRSIQNNNT 490
Query: 234 LEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYV 293
L +CI+ G+ +HH+ L+ ERR++E+ Y G L ++ TSTLAAGVNLP++RVI R +
Sbjct: 491 LIDCIVKGIGFHHSGLSHIERRIVEKGYRNGILSLLTATSTLAAGVNLPSKRVIFRGINI 550
Query: 294 GRDFISLNMYKQMVGRAGRTGLQES-GES-IMLCKTMQDFLRFSS--------MMNAGPE 343
G+ F++ YKQM GRAGR G + + GES I++ +T+ R S ++ A +
Sbjct: 551 GKSFLTCVDYKQMSGRAGRAGQKGAFGESFILVNETLSQPGREVSEEVENALGLITADMK 610
Query: 344 PISSHMDPPT--LVDLILEVVAA------NL-CSSLEDVKTLIKHT------------LF 382
P+ S T + LILE++A N+ ++ E + HT +
Sbjct: 611 PLMSSFFTNTNGITRLILEILAVLFEFDQNISVNNKEKIPDKGSHTGSILDLLTESTLMS 670
Query: 383 YQLKSPED-QQTFLET--TLSEIVASLLASKGTMLTMNEAGHLSL---------TSIAKA 430
YQ+K D +L+ L ++ LL K M + +S+ T + KA
Sbjct: 671 YQIKLYNDLSHEYLKNIDALERALSYLLEKKMIMNREKKTNPISIGGYTLNCCCTQLGKA 730
Query: 431 AVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEYRIPSDG 478
V +GLS L +Y +L N + L + +M +LV P S+G
Sbjct: 731 IVSSGLSPSTGLELYDELRRNMESTFLGDLTYMSYLVTPFPPNEISNG 778
>gi|448457921|ref|ZP_21595926.1| ski2-like helicase [Halorubrum lipolyticum DSM 21995]
gi|445810222|gb|EMA60253.1| ski2-like helicase [Halorubrum lipolyticum DSM 21995]
Length = 815
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 111/394 (28%), Positives = 190/394 (48%), Gaps = 44/394 (11%)
Query: 15 EFKFYLEEYA---GVK-GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENR--IDEIGL 68
EF+ + EE+ GV G Y L + I + T EK + SLI+ ID++
Sbjct: 87 EFERW-EEFGVTVGVSTGNYESDGEWLATRDIIVATSEK----VDSLIRNGAPWIDDLTC 141
Query: 69 IVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVENS 128
+V DE H++++P RGP LE ++K+ + +Q A+SAT+GN + ++ +++ +
Sbjct: 142 VVSDEVHLVDDPNRGPTLEVTLAKLRRVNPGLQTVALSATVGNADVIADWLDAELVESDW 201
Query: 129 RP---------TKHSEYVTVDKRVFQSFDGKSLT-EIYADNLDYSLTGSGPDAVLHLVQG 178
RP ++ KR G+ T + AD LD G G +
Sbjct: 202 RPIDLRMGVHFGNAIDFADGSKREVPVERGEDQTARLVADALDTEEDGQGGSS------- 254
Query: 179 NLMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECI 238
L+F +S+ + A +L P + ++ +L E ++ +D + +L + +
Sbjct: 255 ----LVFVNSRRNAESSARKLTDVTGPRLTDDERDTLRELAEEIRSGSDTDTAADLADAV 310
Query: 239 LYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRD------SY 292
G A+HHA L + +R +E+A+ ++ I T TLAAGVN PA+RVI+RD +
Sbjct: 311 EQGSAFHHAGLRSEDRARVEDAFRDRLIKCISATPTLAAGVNTPARRVIVRDWRRYDGEF 370
Query: 293 VGRDFISLNMYKQMVGRAGRTGLQESGESIML---CKTMQDFLRFSSMMNAGPEPISSHM 349
G + + QM GRAGR GL GE+++L T ++ F + A PEP+ S +
Sbjct: 371 GGMKPLDVLEVHQMCGRAGRPGLDPYGEAVLLANDADTKEEL--FERYLWADPEPVRSKL 428
Query: 350 DP-PTLVDLILEVVAANLCSSLEDVKTLIKHTLF 382
P L +L VA+ S+ + + + + +TL+
Sbjct: 429 AAEPALRTHVLATVASGFASTRDGLLSFLDNTLY 462
>gi|222481106|ref|YP_002567343.1| ski2-like helicase [Halorubrum lacusprofundi ATCC 49239]
gi|222454008|gb|ACM58273.1| DEAD/DEAH box helicase domain protein [Halorubrum lacusprofundi
ATCC 49239]
Length = 824
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 110/394 (27%), Positives = 192/394 (48%), Gaps = 44/394 (11%)
Query: 15 EFKFYLEEYA---GVK-GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENR--IDEIGL 68
EF+ + EE+ GV G Y L + I + T EK + SLI+ ID++
Sbjct: 87 EFERW-EEFGVTVGVSTGNYESDGEWLATRDIIVATSEK----VDSLIRNGAPWIDDLTC 141
Query: 69 IVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVENS 128
+V DE H++++P RGP LE ++K+ + +Q A+SAT+GN + ++ +++ +
Sbjct: 142 VVSDEVHLVDDPNRGPTLEVTLAKLRKVNPGLQTVALSATVGNADVIAEWLDAELVESDW 201
Query: 129 RP---------TKHSEYVTVDKRVFQSFDGKSLT-EIYADNLDYSLTGSGPDAVLHLVQG 178
RP ++ KR G+ T + AD LD G G +
Sbjct: 202 RPIDLRMGVHFGNAIDFADGSKREVPVERGEDQTARLVADALDTEEDGQGGSS------- 254
Query: 179 NLMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECI 238
L+F +S+ + A +L P + ++ + +L + ++ +D +++L + +
Sbjct: 255 ----LVFVNSRRNAESSARKLTDVTGPRLTDDERDQLRELADEIRSGSDTDTASDLADAV 310
Query: 239 LYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRD------SY 292
G A+HHA L + +R +E+A+ ++ I T TLAAGVN PA+RVI+RD +
Sbjct: 311 EQGSAFHHAGLRSEDRARVEDAFRDRLIKCISATPTLAAGVNTPARRVIVRDWRRYDGEF 370
Query: 293 VGRDFISLNMYKQMVGRAGRTGLQESGESIML---CKTMQDFLRFSSMMNAGPEPISSHM 349
G + + QM GRAGR GL GE+++L T ++ F + A PEP+ S +
Sbjct: 371 GGMKPLDVLEVHQMCGRAGRPGLDPYGEAVLLANDADTKEEL--FERYLWADPEPVRSKL 428
Query: 350 DP-PTLVDLILEVVAANLCSSLEDVKTLIKHTLF 382
P L +L VA+ S+ + + + + +TL+
Sbjct: 429 AAEPALRTHVLATVASGFASTRDGLLSFLDNTLY 462
>gi|292654191|ref|YP_003534088.1| ATP-dependent DNA helicase Hel308a [Haloferax volcanii DS2]
gi|448293736|ref|ZP_21483839.1| ski2-like helicase [Haloferax volcanii DS2]
gi|291371821|gb|ADE04048.1| ATP-dependent DNA helicase Hel308a [Haloferax volcanii DS2]
gi|445569657|gb|ELY24228.1| ski2-like helicase [Haloferax volcanii DS2]
Length = 827
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 120/396 (30%), Positives = 194/396 (48%), Gaps = 33/396 (8%)
Query: 15 EFKFYLEEYA---GVK-GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQEN--RIDEIGL 68
EF+ + EEY GV G Y L+ + I + T EK + SL++ N +D++
Sbjct: 87 EFERW-EEYGIDVGVSTGNYESDGEWLSSRDIIVATSEK----VDSLVRNNAAWMDQLTC 141
Query: 69 IVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVENS 128
+V DE H++++ RGP LE ++K+ L ++Q+ A+SAT+GN +S +++ +
Sbjct: 142 VVADEVHLVDDRHRGPTLEVTLAKLRRLNTNLQVVALSATVGNAGVVSDWLDAELVKSDW 201
Query: 129 RPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNL-MVLIFCS 187
RP V V SF S E+ + DA+ +G+ L+F +
Sbjct: 202 RPIDLKMGVHYGNAV--SFADGSQREVPVGRGERQTPALVADALEGDGEGDQGSSLVFVN 259
Query: 188 SKIACSNLALRLQFDRFPGTKEY-KKQEKEDLIE---ALKEENDGKLSTNLEECILYGVA 243
S+ + A R+ T+ Y E+ DL E +++ +D + S +L + G A
Sbjct: 260 SRRNAESAARRMA----DVTERYVTGDERSDLAELAAEIRDVSDTETSDDLANAVAKGAA 315
Query: 244 YHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRD------SYVGRDF 297
+HHA L A R L+E+A+ ++ IC T TLAAGVN P++RV++RD Y G
Sbjct: 316 FHHAGLAAEHRTLVEDAFRDRLIKCICATPTLAAGVNTPSRRVVVRDWQRYDGDYGGMKP 375
Query: 298 ISLNMYKQMVGRAGRTGLQESGESIMLCK--TMQDFLRFSSMMNAGPEPISSHMDP-PTL 354
+ + QM+GRAGR GL GE+++L K +D L F + A E + S + P L
Sbjct: 376 LDVLEVHQMMGRAGRPGLDPYGEAVLLAKDADARDEL-FERYIWADAEDVRSKLAAEPAL 434
Query: 355 VDLILEVVAANLCSSLEDVKTLIKHTLF-YQLKSPE 389
+L VA+ + E + + TL+ Q PE
Sbjct: 435 RTHLLATVASGFAHTREGLLEFLDQTLYATQTDDPE 470
>gi|448337416|ref|ZP_21526494.1| ski2-like helicase [Natrinema pallidum DSM 3751]
gi|445625591|gb|ELY78947.1| ski2-like helicase [Natrinema pallidum DSM 3751]
Length = 789
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 170/707 (24%), Positives = 308/707 (43%), Gaps = 69/707 (9%)
Query: 14 EEFKFYLEEYAGVK-----GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE--NRIDEI 66
+EF+ Y E GV G Y T L K I + T EK + SL++ + + ++
Sbjct: 86 DEFEAY--ERFGVTVGVTTGNYESTSDWLATKDIVVATSEK----VDSLVRNGADWLSDL 139
Query: 67 GLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVE 126
+V DE H++++ RGP LE ++K+ L +Q+ A+SAT+GN + ++ +++
Sbjct: 140 TCVVSDEVHLIDDRNRGPTLEVTLAKLRKLNPRMQLVALSATVGNADEIADWLDAALVDT 199
Query: 127 NSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFC 186
+ RP V + +FD S E+ + + V ++Q L+F
Sbjct: 200 DWRPIDLQMGVHYGNAL--NFDDGSTREVPVEGSEKQEAA----LVRDILQEEGSSLVFV 253
Query: 187 SSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIE---ALKEENDGKLSTNLEECILYGVA 243
+S+ A RL E +E+ +L E +++++D + S +L E + G A
Sbjct: 254 NSRRNAEAAARRLGS---VSKNELTSEEQTELAELAAEIRDDSDTETSKDLAEAVERGSA 310
Query: 244 YHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRD------SYVGRDF 297
+HHA L++ +R ++E+A+ L++I T TLAAGVN PA+RVI+RD S G
Sbjct: 311 FHHAGLSSTQRTIVEDAFRDRLLKVISATPTLAAGVNTPARRVIVRDWRRFDPSAGGMAP 370
Query: 298 ISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLR-FSSMMNAGPEPISSHMDP-PTLV 355
+ + QM+GRAGR GL GE+++L K + F + A PEP+ S + P L
Sbjct: 371 LDVLEIHQMMGRAGRPGLDPYGEAVLLAKNHDESEELFDRYIWAEPEPVRSKLAAEPALR 430
Query: 356 DLILEVVAANLCSSLEDVKTLIKHTLFYQLKSPEDQ-QTFLETTLSEIVASLLASKGTML 414
+L +A+ + ++ ++ TL+ S + +T +T L + ++ + T
Sbjct: 431 THVLATIASGFARTRGELLEFLEATLYASQSSEAGRLETVTDTVLQYLESNDFIERETSG 490
Query: 415 TMNEAG--HLSLTSIAKAAVQAG---------LSHDVCLII-----YSDLLHNKLNFCLL 458
+ G + TS A A G L H V + ++++H +
Sbjct: 491 SNGTEGDDDGAFTSAAALADDGGRDEELEATSLGHTVSRLYLDPMSAAEIVHGLADADER 550
Query: 459 NSLHMLFLVIPLEYRIPSDGILLSRSKVYDRYTKFHPQTLRVAEALGVTENLVALNVTGK 518
+ L+ +I R P L RS +R+ + + R AE LG N +
Sbjct: 551 PTALGLYQLI---SRTPDMYELYLRSGEDERFGELFYE--REAELLG--------NAPSE 597
Query: 519 LKDEK-KALLCRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFC 577
++E+ + L +L D + +++ Y I L+ ++ +
Sbjct: 598 FEEERFEDWLSALKTGKLLEDWATETDEEQLTDRYKIGPGDLRGKVDTAEWLLGAAESLA 657
Query: 578 EELPELWCYKQLLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIARAD 637
E+ W + + + + L L+ + GV RAR+L +AG + AD
Sbjct: 658 AEIDSEWTVA--VREARARVEHGVGEELLELVGVGGVGRKRARRLYDAGIEEPADLRTAD 715
Query: 638 AKEMVAKIRHLPLRSARNLISAAKLHFITKMDKVEAMKNLIQNLQKN 684
++A ++ ++A+ ++ A + MD VE N + N
Sbjct: 716 KGVILAVLKG--RKTAKTILENAGREDPS-MDGVEPRSNGANDGDGN 759
>gi|448628614|ref|ZP_21672383.1| ski2-like helicase [Haloarcula vallismortis ATCC 29715]
gi|445758145|gb|EMA09470.1| ski2-like helicase [Haloarcula vallismortis ATCC 29715]
Length = 800
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 118/425 (27%), Positives = 208/425 (48%), Gaps = 26/425 (6%)
Query: 14 EEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENR--IDEIGLIVI 71
EEF+ Y + G Y L K I + T EK + SL++ + I+++ +V
Sbjct: 89 EEFEQYGLDIGVSTGNYESEGGWLADKDIVVATSEK----VDSLVRNDAPWIEDLTCVVT 144
Query: 72 DEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVENSRPT 131
DE H++++ +RGP LE ++K+ L +Q A+SATIGN AL+T+++ + RP
Sbjct: 145 DEVHLVDDGERGPTLEVTLAKLRRLNPDLQTVALSATIGNAEALATWLDAGLVDSDWRPI 204
Query: 132 KHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIA 191
+ V + + + S + N + V ++ + L+F +S+
Sbjct: 205 DLQKGVHYGQALH--LEDGSQQRLSVQNNEKQTAA----IVRDTLEDDGSTLVFVNSRRN 258
Query: 192 CSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTA 251
A RL P + ++ + ++ E +++ +D + S +L + + G A+HHA L+
Sbjct: 259 AEAAAGRLANTVRPHLTDEERAQLANIAEEIRDVSDTETSDDLADAVAGGAAFHHAGLSR 318
Query: 252 GERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIR------DSYVGRDFISLNMYKQ 305
G R L+E+A+ ++++C T TLAAGVN P++RV++R + G +S+ Q
Sbjct: 319 GHRELVEDAFRDRLVKVVCATPTLAAGVNTPSRRVVVRDWRRYDGTAGGMAPLSVLEVHQ 378
Query: 306 MVGRAGRTGLQESGESIMLCKTMQDFLR-FSSMMNAGPEPISSHMDP-PTLVDLILEVVA 363
M+GRAGR G GE++++ + + F + A PEP+ S + P L IL VA
Sbjct: 379 MMGRAGRPGRDPYGEAVLIASSHDEVDELFERYVWADPEPVRSKLAAEPALRTHILATVA 438
Query: 364 ANLCSSLEDVKTLIKHTLFYQLKSPEDQQTFLETTLSEIVASLLASKGTMLTMNEAGHLS 423
+ S E + ++ TL+ S D LE + +++ L + L + EAG L
Sbjct: 439 SGFARSREGLLEFLEQTLY---ASQTDDSGQLERVVDDVLTYL--QRNDFLEI-EAGELD 492
Query: 424 LTSIA 428
TS+
Sbjct: 493 ATSLG 497
>gi|448544221|ref|ZP_21625534.1| ski2-like helicase [Haloferax sp. ATCC BAA-646]
gi|448551233|ref|ZP_21629375.1| ski2-like helicase [Haloferax sp. ATCC BAA-645]
gi|448558274|ref|ZP_21632948.1| ski2-like helicase [Haloferax sp. ATCC BAA-644]
gi|445705725|gb|ELZ57618.1| ski2-like helicase [Haloferax sp. ATCC BAA-646]
gi|445710789|gb|ELZ62587.1| ski2-like helicase [Haloferax sp. ATCC BAA-645]
gi|445713162|gb|ELZ64941.1| ski2-like helicase [Haloferax sp. ATCC BAA-644]
Length = 819
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 120/396 (30%), Positives = 193/396 (48%), Gaps = 33/396 (8%)
Query: 15 EFKFYLEEYA---GVK-GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQEN--RIDEIGL 68
EF+ + EEY GV G Y L+ + I + T EK + SL++ N +D++
Sbjct: 87 EFERW-EEYGIDVGVSTGNYESDGEWLSSRDIIVATSEK----VDSLVRNNAAWMDQLTC 141
Query: 69 IVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVENS 128
+V DE H++++ RGP LE ++K+ L ++QI A+SAT+GN ++ +++ +
Sbjct: 142 VVADEVHLVDDRHRGPTLEVTLAKLRRLNTNLQIVALSATVGNAGVVADWLDAKLVKSDW 201
Query: 129 RPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNL-MVLIFCS 187
RP V V SF S E+ + DA+ G+ L+F +
Sbjct: 202 RPIDLKMGVHYGNAV--SFADGSQREVPVGRGERQTPALVADALEGDDDGDQGSSLVFVN 259
Query: 188 SKIACSNLALRLQFDRFPGTKEY-KKQEKEDLIE---ALKEENDGKLSTNLEECILYGVA 243
S+ + A R+ T+ Y E+ DL E +++ +D + S +L + G A
Sbjct: 260 SRRNAESAARRMA----DVTERYITGDERSDLAELAAEIRDVSDTETSEDLANAVAKGAA 315
Query: 244 YHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRD------SYVGRDF 297
+HHA L A R L+E+A+ ++ IC T TLAAGVN P++RV++RD Y G
Sbjct: 316 FHHAGLAAEHRTLVEDAFRDRLIKCICATPTLAAGVNTPSRRVVVRDWQRYDGDYGGMKP 375
Query: 298 ISLNMYKQMVGRAGRTGLQESGESIMLCK--TMQDFLRFSSMMNAGPEPISSHMDP-PTL 354
+ + QM+GRAGR GL GE+++L K +D L F + A E + S + P L
Sbjct: 376 LDVLEVHQMMGRAGRPGLDPYGEAVLLAKDADARDEL-FERYIWADAEDVRSKLAAEPAL 434
Query: 355 VDLILEVVAANLCSSLEDVKTLIKHTLF-YQLKSPE 389
+L VA+ + E + + TL+ Q PE
Sbjct: 435 RTHLLATVASGFAHTREGLLEFLDQTLYATQTDDPE 470
>gi|218884027|ref|YP_002428409.1| DEAD/DEAH box helicase domain-containing protein [Desulfurococcus
kamchatkensis 1221n]
gi|218765643|gb|ACL11042.1| DEAD/DEAH box helicase domain protein [Desulfurococcus
kamchatkensis 1221n]
Length = 717
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 118/391 (30%), Positives = 201/391 (51%), Gaps = 39/391 (9%)
Query: 10 AKAAEEF-KFYLEEYAGVK-----GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRI 63
A A+E++ +F E GV+ G Y L+ I + T E+ ++ + + +
Sbjct: 85 ALASEKYGEFKTLEALGVRVGVSTGDYDEPVEYLSWYDIIVATYERFDSILRQ--KPSWL 142
Query: 64 DEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGIT 123
++GL+VIDE HM ++P+RGPI+E + +++L ++ +I +SATIGN AL+ ++
Sbjct: 143 RDVGLVVIDEIHMASDPERGPIVEVIAARLL--RQGTRIIGLSATIGNPEALAEWLNAAL 200
Query: 124 YVENSRPTKHSEYVTVDKRVFQSFDGKSLTE-IYADNLDYSLTGSGPDAVLH-LVQGNLM 181
+ RP + E K+ F + E + +N D L D LH +V+ L
Sbjct: 201 VNTDWRPVRLVEGYLDKKKPGLVFPVDNRVESVDLENRDPFL-----DIPLHNVVELGLQ 255
Query: 182 VLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEA-LKEENDGKLSTN---LEEC 237
L+F ++ + A+ + ED ++ + E D S L +
Sbjct: 256 TLVFIHNRRKVEDYAVE--------AARHLPMLPEDAVKPFISELEDAPTSIERDVLSDL 307
Query: 238 ILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIR----DSYV 293
I GV +HHA L++ R +E+A+ + L+I+ T TLAAGVNLPA+RV++ D+
Sbjct: 308 IRRGVGFHHAGLSSIARSTVEKAFRSRLLKIVYATPTLAAGVNLPARRVLVSLKRYDASR 367
Query: 294 GRDF-ISLNMYKQMVGRAGRTGLQESGESIML-CKTMQDFLRFSSMMNAGPEPISSH-MD 350
GR IS++ YKQM GRAGR G E GES++ + + L++ +N PEP++ +
Sbjct: 368 GRRVNISISEYKQMAGRAGRPGYDEIGESVITDASSNSEALKY---INGSPEPVAGKLLS 424
Query: 351 PPTLVDLILEVVAANLCSSLEDVKTLIKHTL 381
+L +L +VA+ SS+++V ++ TL
Sbjct: 425 ERSLRIHVLSLVASGEASSIDEVSEILSSTL 455
>gi|307594663|ref|YP_003900980.1| DEAD/DEAH box helicase [Vulcanisaeta distributa DSM 14429]
gi|307549864|gb|ADN49929.1| DEAD/DEAH box helicase domain protein [Vulcanisaeta distributa DSM
14429]
Length = 763
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 115/390 (29%), Positives = 193/390 (49%), Gaps = 36/390 (9%)
Query: 13 AEEFKFYLEEYAGVK-----GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIG 67
A + + Y E GV+ G+Y L I + T EK L+ + R ++G
Sbjct: 86 ARDLRIY--EKLGVRIAVTTGEYDKEDAWLMNYDIVVTTYEKLDSLLRHKAEWLR--QVG 141
Query: 68 LIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVEN 127
++VIDE H +++ +RGP +E +++KV L S Q+ A+SATIGN ++ +++ V +
Sbjct: 142 VLVIDEIHYIDDDKRGPTIESIIAKVKALGLSTQLLALSATIGNAEEIANYLDADLVVSD 201
Query: 128 SRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLM----VL 183
RP K E V D ++ S ++L + + VL LV ++ L
Sbjct: 202 WRPVKLKEGVYYDGVIYYSDGSRALIKDLG------------NPVLSLVMDTIVNGGQAL 249
Query: 184 IFCSSKIACSNLALRL-QFDRFPGTKEYKKQEKEDLIEALKEENDGK-LSTNLEECILYG 241
+F +S+ LA ++ + G K + + ++ E + K L L + G
Sbjct: 250 VFTNSRSNTVKLAQQIAHYICNYGAKIIEPGTLMKISNSIIEASQSKLLGEELARVVKCG 309
Query: 242 VAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIR-----DSYVGRD 296
VA+HHA L R ++E ++ ++ + T+TLAAGVNLPA+RVII + +G +
Sbjct: 310 VAFHHAGLDMDARSIVENSFRDRLIKAVVATTTLAAGVNLPARRVIIHEYRRYEPGIGME 369
Query: 297 FISLNMYKQMVGRAGRTGLQESGESIMLCKTMQ--DFLRFSSMMNAGPEPISSH-MDPPT 353
+ + YKQM GRAGR GL GE++++ ++ D+L + ++A E I S +
Sbjct: 370 ELPVMEYKQMAGRAGRPGLDPYGEAVLIARSEDEIDYL-IRNYISARVEDIRSKFLTDKN 428
Query: 354 LVDLILEVVAANLCSSLEDVKTLIKHTLFY 383
L IL +A+ SS++DV + TL Y
Sbjct: 429 LATHILSAIASGYASSIDDVMRFVSSTLGY 458
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 73/147 (49%), Gaps = 4/147 (2%)
Query: 517 GKLKDEK-KALLCRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYR 575
G+ +DE+ + L A +L D N + + K Y + L+ + ++ + AS V R
Sbjct: 582 GEFEDEEIEDYLSTVKTAVMLLDWANEVSEDDLYKNYDVGPGDLRVYSDLMDWLASAVAR 641
Query: 576 FCEELPELWCYKQLLTDLPQTLMYCRAPNLRALM-DLPGVKIGRARQLLNAGYSSLELIA 634
L + +++ L L L Y L L+ +L GV RAR L NAG+ S+E IA
Sbjct: 642 LAGALG-MRRHEERLNLLKWRLTYGVKDELIELVVNLEGVGRARARALYNAGFKSVEDIA 700
Query: 635 RADAKEMVAKIRHLPLRSARNLISAAK 661
AD + +++ IR + AR++I A+
Sbjct: 701 NADPR-VISMIRGFGDKLARSIIEQAR 726
>gi|448622229|ref|ZP_21668923.1| ski2-like helicase [Haloferax denitrificans ATCC 35960]
gi|445754311|gb|EMA05716.1| ski2-like helicase [Haloferax denitrificans ATCC 35960]
Length = 832
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 119/396 (30%), Positives = 194/396 (48%), Gaps = 33/396 (8%)
Query: 15 EFKFYLEEYA---GVK-GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQEN--RIDEIGL 68
EF+ + EEY GV G Y L+ + I + T EK + SL++ N +D++
Sbjct: 87 EFERW-EEYGIDVGVSTGNYESDGEWLSSRDIIVATSEK----VDSLVRNNAAWMDQLTC 141
Query: 69 IVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVENS 128
+V DE H++++ RGP LE ++K+ L ++Q+ A+SAT+GN ++ +++ +
Sbjct: 142 VVADEVHLVDDRHRGPTLEVTLAKLRRLNPNLQVVALSATVGNAGVVADWLDAELVKSDW 201
Query: 129 RPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNL-MVLIFCS 187
RP V V SF S E+ + DA+ G+ L+F +
Sbjct: 202 RPIDLKMGVHYGNAV--SFADGSQREVPVGRGERQTPALVADALEGDDDGDQGSSLVFVN 259
Query: 188 SKIACSNLALRLQFDRFPGTKEY-KKQEKEDLIE---ALKEENDGKLSTNLEECILYGVA 243
S+ + A R+ T+ Y E+ DL E +++ +D + S +L + + G A
Sbjct: 260 SRRNAESAARRMA----DVTERYLTGDERSDLAELAAEIRDVSDTETSEDLAKAVAKGAA 315
Query: 244 YHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRD------SYVGRDF 297
+HHA L A R L+E+A+ ++ IC T TLAAGVN P++RV++RD Y G
Sbjct: 316 FHHAGLAAEHRTLVEDAFRDRLIKCICATPTLAAGVNTPSRRVVVRDWQRYDGDYGGMKP 375
Query: 298 ISLNMYKQMVGRAGRTGLQESGESIMLCK--TMQDFLRFSSMMNAGPEPISSHMDP-PTL 354
+ + QM+GRAGR GL GE+++L K +D L F + A E + S + P L
Sbjct: 376 LDVLEVHQMMGRAGRPGLDPYGEAVLLAKDADARDEL-FERYIWADAEDVRSKLAAEPAL 434
Query: 355 VDLILEVVAANLCSSLEDVKTLIKHTLFY-QLKSPE 389
+L VA+ + E + + TL+ Q PE
Sbjct: 435 RTHLLATVASGFAHTREGLLEFLDQTLYATQTDDPE 470
>gi|296242069|ref|YP_003649556.1| DEAD/DEAH box helicase [Thermosphaera aggregans DSM 11486]
gi|296094653|gb|ADG90604.1| DEAD/DEAH box helicase domain protein [Thermosphaera aggregans DSM
11486]
Length = 712
Score = 145 bits (366), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 147/568 (25%), Positives = 257/568 (45%), Gaps = 71/568 (12%)
Query: 28 GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILE 87
G Y +L I + T E+ L+ ++ + I + IVIDE H + +P RGPI+E
Sbjct: 105 GDYDNPAEELGDYDIIVATYERFDSLL--RLKPSWISRVKAIVIDEMHTIGDPDRGPIIE 162
Query: 88 CVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSF 147
+V++ L K +QI +SATIGN + L+ +I+G RP R+ + +
Sbjct: 163 MIVARAL--KAGVQILGLSATIGNPHQLAEWIKGGLVDAPWRPV----------RLVEGY 210
Query: 148 DGKSLTEIYADN-LDYSLTGSGPDAVLHLVQGNL----MVLIFCSSKIACSNLALRLQFD 202
KS +I DN ++ S+ D +L +V NL ++F ++ A ++
Sbjct: 211 YSKSSKKIIFDNGVEESVEVITGDRILDIVLHNLGMDYQTIVFIHNRRKVEEYAEKVSH- 269
Query: 203 RFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYL 262
R P + E ED L ++ L + GV YHHA L+ RR++EEA+
Sbjct: 270 RLPPIPD---DEIEDFTSQLSDDPSTMEREALTSLLKKGVGYHHAGLSTVGRRVVEEAFR 326
Query: 263 AGTLQIICCTSTLAAGVNLPAQRVIIR----DSYVGRDF-ISLNMYKQMVGRAGRTGLQE 317
+ L+++ T TLAAGVNLPA+RV++ D+ GR I+++ YKQM GRAGR
Sbjct: 327 SRVLKVVFATPTLAAGVNLPARRVVVSVKRYDASKGRMVNITVSEYKQMAGRAGRPRYDR 386
Query: 318 SGESIML-CKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDL-ILEVVAANLCSSLEDVKT 375
GESI++ + ++ L F + PE + + + + L ++A+ +S+E++
Sbjct: 387 VGESIIVDASSDKEALAF---LKGRPEEVRGKLASSRNLRIHALSLLASGEAASIEELSE 443
Query: 376 LIKHTL-FYQLKSPEDQQTFLETTLSEIVASLLASKGTMLTMNEAGHLSLTSIAKAAVQA 434
T Y S E ++F+E T++ ++ T + + + G L T++ K
Sbjct: 444 TFWLTFSAYYAGSKEFLKSFMEETINYLL-------NTNMVVEKNGFLEPTNLGK----- 491
Query: 435 GLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEYRIPSDGILL---SRSKVYDRYT 491
+ Y+ L ++ N PL PSD +L + + + R +
Sbjct: 492 -------ITSYTYLDPATVDTWRRNKP-------PL----PSDVYILHVVTLTPDFSRSS 533
Query: 492 KFHPQTL---RVAEALGVTENLVALNVTGKLKDEKKALLCRFFHACILYDVLNFDNHQKV 548
+ P + +AL + + + GK++ E L + +A IL D +N ++
Sbjct: 534 PYIPSKIIEEFEEDALEMGRH-GTIPSPGKVEVEYDEWLASYVYAMILMDWINETPEDEI 592
Query: 549 AKMYGIQNSHLQNFLNVTSYFASKVYRF 576
+ Y I L N ++ S + +
Sbjct: 593 IRKYSIGPGDLFNIKETATWIVSSLAKI 620
>gi|242083350|ref|XP_002442100.1| hypothetical protein SORBIDRAFT_08g011940 [Sorghum bicolor]
gi|241942793|gb|EES15938.1| hypothetical protein SORBIDRAFT_08g011940 [Sorghum bicolor]
Length = 319
Score = 145 bits (365), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 99/296 (33%), Positives = 154/296 (52%), Gaps = 20/296 (6%)
Query: 166 GSGPDAVLHL-----VQGNLMVLIFCSSKIACSNLALRL-QFDRFPGTKEYKK----QEK 215
G PD ++ L +QG+ VL+FCSS+ C + A + +F + +
Sbjct: 15 GKDPDHIVELCNEVVLQGH-SVLLFCSSRKGCESTARHVAKFLKLSSVGSSDVSSEFSDA 73
Query: 216 EDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTL 275
IEAL+ G L L E + +GVAYHHA LT ER ++E Y G ++++ TSTL
Sbjct: 74 AAAIEALRRCPAG-LDPILGETLPFGVAYHHAGLTVEEREIVESCYRKGLVRVLTATSTL 132
Query: 276 AAGVNLPAQRVIIRDSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFS 335
AAGVNLPA+RVI R +GRDFI Y+QM GRAGRTG+ GESI++C+ +++ R +
Sbjct: 133 AAGVNLPARRVIFRQPKIGRDFIDGTRYRQMAGRAGRTGIDTKGESILVCR-LEEVKRIT 191
Query: 336 SMMNAGPEPISSHM--DPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQLKSPEDQQT 393
++ + P+ S + D + I+EVVA + + D+ ++ TL + +D
Sbjct: 192 GIIRSNCPPLESCLSEDKNGMTHAIMEVVAGGIVQTANDIHRYVRCTLLNSTRPFDDVVK 251
Query: 394 FLETTLSEIVASLLASKGTMLTMNEAGHLSLTSIAKAAVQAGLSHDVCLIIYSDLL 449
+ +L L K + +E S T + +AA + L+ + L+ Y LL
Sbjct: 252 SAQDSL-----RWLCHKRFLDWNHETKIYSATPLGRAAFGSSLNPEESLVAYLSLL 302
>gi|339242739|ref|XP_003377295.1| putative DEAD/DEAH box helicase [Trichinella spiralis]
gi|316973917|gb|EFV57460.1| putative DEAD/DEAH box helicase [Trichinella spiralis]
Length = 524
Score = 145 bits (365), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 96/304 (31%), Positives = 160/304 (52%), Gaps = 28/304 (9%)
Query: 42 IYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKS-- 99
+ +CTIEK + LI L++E ++ +G +V+DE H++NE RG ILE +++K+++ +
Sbjct: 159 VAVCTIEKANGLINRLVEEENVNCLGCVVVDELHIVNENYRGKILELLLTKLIHFNQKLQ 218
Query: 100 -------IQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSFDGKSL 152
IQ+ AMSAT+ N+ + ++ + RP +EY+ + F DG+ L
Sbjct: 219 SEFKSDRIQLIAMSATLPNLETCAQWLGAKAFRTYHRPVPLTEYIFHCGQFFTK-DGQML 277
Query: 153 TEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRLQFDRFP------- 205
++ + + + L V + VLIFCS+K+ C LA L D F
Sbjct: 278 RKLPGNFILNKDNDNVIGLCLETVVQDSGVLIFCSTKVWCERLA-SLIADAFKELFIQDG 336
Query: 206 ----GTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAY 261
K++ +K+ A + G + + L++ + VA+HHA LT ER +E +
Sbjct: 337 WLSIQLKKFIHPDKQAKYIADFAKATGNVDSVLKKTLPVAVAFHHAGLTMEEREKLESGF 396
Query: 262 LAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGRD----FISLN--MYKQMVGRAGRTGL 315
G ++++ T+TL++GVNLPA+RVIIR + + + LN YKQM+GRAGR G+
Sbjct: 397 RNGLIKVLVATTTLSSGVNLPAKRVIIRSLWGNPNGPNPALCLNSCTYKQMIGRAGRKGM 456
Query: 316 QESG 319
G
Sbjct: 457 DSEG 460
>gi|332159494|ref|YP_004424773.1| ski2-like helicase [Pyrococcus sp. NA2]
gi|331034957|gb|AEC52769.1| ski2-like helicase [Pyrococcus sp. NA2]
Length = 715
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 130/438 (29%), Positives = 203/438 (46%), Gaps = 62/438 (14%)
Query: 1 MVHEKYQSLAKAAEEFKFYLE---EYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLI--G 55
+ EKY+ EFK + E + A G Y L K I I T EK L+ G
Sbjct: 80 LAEEKYK-------EFKDWEEIGLKVAMATGDYDSKDEWLGKYDIIIATAEKFDSLLRHG 132
Query: 56 SLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINAL 115
S + I ++ ++V+DE H++ RG LE +++++L QI +SATIGN L
Sbjct: 133 S----SWIRDVKILVVDEIHLIGSRDRGATLEFIITQML---DRAQIIGLSATIGNPEEL 185
Query: 116 STFIEGITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHL 175
+ ++ + RP K V VF DGK+ D + S D V
Sbjct: 186 ADWLNAKLIKSDWRPVKLRRGVFYQGFVFWE-DGKT------DKFN-----SWEDLVYDA 233
Query: 176 VQGNLMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLE 235
V+ LIF + + AL L +K + + I L+E L+T+LE
Sbjct: 234 VKKGKGALIFVNMRRKAEKTALEL-------SKTVRDLLSREEIRKLRE-----LATSLE 281
Query: 236 E---------CILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRV 286
E +L GVA+HHA L ER L+E+ + G ++++ T TL+AG+N PA RV
Sbjct: 282 ENPTNEKLARALLGGVAFHHAGLGRNERVLVEDNFRKGLIKVVVATPTLSAGINTPAFRV 341
Query: 287 IIRDSY----VGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGP 342
IIRD++ G + I + +QM+GRAGR E GE+I++ T + L + P
Sbjct: 342 IIRDTWRYSEFGMERIPILEIQQMMGRAGRPKYDEIGEAIIVSATEEPSLVMDYYIKGKP 401
Query: 343 EPISSHM-DPPTLVDLILEVVAANLCSSLEDVKTLIKHTLF-YQLKSPEDQQTFLETTLS 400
E + S + + L IL ++A S D+ ++ T + YQ K P LE +
Sbjct: 402 EKLFSQLSNESILRSQILALIATFGFSEFRDIYNFLEKTFYAYQGKDP----YLLEEKIR 457
Query: 401 EIVASLLASKGTMLTMNE 418
I+ LL ++ +T+++
Sbjct: 458 GIIYFLLENEFIDVTLDD 475
>gi|307354952|ref|YP_003896003.1| DEAD/DEAH box helicase domain-containing protein [Methanoplanus
petrolearius DSM 11571]
gi|307158185|gb|ADN37565.1| DEAD/DEAH box helicase domain protein [Methanoplanus petrolearius
DSM 11571]
Length = 747
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 117/437 (26%), Positives = 202/437 (46%), Gaps = 51/437 (11%)
Query: 10 AKAAEEFKFYLEEYAG-------VKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQEN- 61
A A+E+F EE++G G Y L + I I T EK + SL++ N
Sbjct: 78 ALASEKF----EEFSGKGPKTGIATGDYDKKDEYLGRNDIIIATSEK----VDSLLRNNA 129
Query: 62 -RIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIE 120
+ I +V+DE H+++ RG LE V++K+ + K +QI ++ATIGN AL+++++
Sbjct: 130 AWMGSITCLVVDEAHLIDSEDRGATLEMVITKLRHRNKDLQIIGLTATIGNPRALASWLD 189
Query: 121 GITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNL 180
+ RP + E V ++ + K++ E N D +L + V
Sbjct: 190 ADLVTSDWRPVELKEGVFCRDTLYFGEEIKTI-ETPKKNDDENL-------CIDCVNDGG 241
Query: 181 MVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILY 240
L+F +S+ A R+ + + E E L L++ + + L C+
Sbjct: 242 QCLVFVNSRRNAEGCAKRMA-----SALKLDEPELEKLSVELEKAAETDMGRILAACVKK 296
Query: 241 GVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRD-----SYVGR 295
G A+HHA + +R ++E + G++++I T TLAAG+NLPA+RV+IRD G
Sbjct: 297 GAAFHHAGMKRDQREIVERGFRQGSIRVISSTPTLAAGLNLPARRVVIRDYLRFKGGEGM 356
Query: 296 DFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLR-FSSMMNAGPEPISSHMDPP-T 353
I + Y+QM GRAGR L GE++++ K + + ++A E ++S +D
Sbjct: 357 APIPVREYRQMAGRAGRPHLDPYGEAVLIAKGPEAANGLYEEFISAPAEDVTSRLDDERV 416
Query: 354 LVDLILEVVAANLCSSLEDVKTLIKHTLFYQLKSP--------EDQQTFLETTLSEIVAS 405
L IL +++ + E++ + T + + ED LE A
Sbjct: 417 LTGQILSLISTGFVKTEEELPEFLNETFYVHMNKSTAYIGRIVEDAVALLEE------AG 470
Query: 406 LLASKGTMLTMNEAGHL 422
++ G L+ + GHL
Sbjct: 471 MITRTGEYLSSTDYGHL 487
>gi|161527751|ref|YP_001581577.1| DEAD/DEAH box helicase [Nitrosopumilus maritimus SCM1]
gi|160339052|gb|ABX12139.1| DEAD/DEAH box helicase domain protein [Nitrosopumilus maritimus
SCM1]
Length = 709
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 120/366 (32%), Positives = 184/366 (50%), Gaps = 26/366 (7%)
Query: 28 GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQEN--RIDEIGLIVIDEFHMLNEPQRGPI 85
G + ++ L K SI I T EK + S+I+ IDEIGL++ DE H++ + RGP
Sbjct: 107 GDFENIEKNLEKNSILILTNEK----MDSIIRHGAEWIDEIGLVIADEVHLIGDESRGPT 162
Query: 86 LECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVENS-RPTKHSEYVTVDKRVF 144
LE +++++ L+ QI +SATI N + ++ ++E + VENS RP SE V V
Sbjct: 163 LEMILTQLKLLETKPQIVGLSATITNSDEIADWLECV-LVENSWRPVPLSEGVCDAGEVT 221
Query: 145 QSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRLQ--FD 202
+ DG ++ S+ G+ D + V+ L+F ++ +LA +
Sbjct: 222 MA-DGTVF------EVERSIRGTPIDLGVQSVKDGGQSLVFAETRTRSKSLATKAADAIS 274
Query: 203 RFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYL 262
+ KE + EK + L E +L L + GVA+HHA L R +IE +
Sbjct: 275 QILEKKEISQLEKTSK-KILSENEHTELVKTLALLVKKGVAFHHAGLNQNCREIIETEFR 333
Query: 263 AGTLQIICCTSTLAAGVNLPAQRVIIR-----DSYVGRDF-ISLNMYKQMVGRAGRTGLQ 316
GT++++ T TLAAGVNLPA+RV+I ++ VG + IS+ YKQ+ GRAGR
Sbjct: 334 NGTIKLLSSTPTLAAGVNLPARRVVISNVNRYNAKVGANRPISILEYKQLCGRAGRPQYD 393
Query: 317 ESGESIMLCKTMQDFLRFSSMMNAGPEPISSHM-DPPTLVDLILEVVAANLCSSLEDVKT 375
GESI++ D L ++ PEPI S + D +L +L V+ N ED+
Sbjct: 394 NHGESIIVGNGNTDDL-IDYYIHGEPEPIESKITDDKSLRTHLLSVIVTNPGIKKEDILE 452
Query: 376 LIKHTL 381
TL
Sbjct: 453 FFLQTL 458
>gi|154413947|ref|XP_001580002.1| DEAD/DEAH box helicase family protein [Trichomonas vaginalis G3]
gi|121914215|gb|EAY19016.1| DEAD/DEAH box helicase family protein [Trichomonas vaginalis G3]
Length = 848
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 157/643 (24%), Positives = 285/643 (44%), Gaps = 86/643 (13%)
Query: 39 KKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKK 98
+ +I +CT EK L+ S I ++I L+VIDE HM+ + RG +E ++ K+ L+
Sbjct: 175 RGNIAVCTFEKAHFLLNSAITCGYANKIKLVVIDEIHMIGDESRGAAIEALIIKLNLLEA 234
Query: 99 SIQIFAMSATIG--NINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSFDGKSLT-EI 155
+I ++AT+ + N ++ +I G Y+ SRP K++ + DG+ T
Sbjct: 235 KPRIVTLTATVNEEDANRIAKWINGFAYIWKSRPAPI-------KQMVKKLDGRLCTINS 287
Query: 156 YADNLDYSLTGSGPDAVLHLV---------QGNLMVLIFCSSK---IACSNLALRLQFD- 202
+ ++ S PD HL+ + +L+F +S+ I S+L +D
Sbjct: 288 TGQIVPFTKLQSSPDDKDHLMPLIRTLLSKKCQSTILVFVNSRMDTIKISSLIANHMYDD 347
Query: 203 -----RFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLI 257
+ P + +++ DLI+ + N G + CI GV +HH + +R+LI
Sbjct: 348 TIPLPKVPPPSDSLLKKRLDLIKKMA-ANSGFIDDTTVTCIKNGVLFHHGGILLEDRKLI 406
Query: 258 EEAYLAGTLQIICCTSTLAAGVNLPA-QRVIIRDSYVG-----RDFISLNMYKQMVGRAG 311
EEA + + ++ T+TL+AGVN+ RVII + Y + I+ Y QM+GRAG
Sbjct: 407 EEAARSKIINVLVATTTLSAGVNIHGVTRVIIHNIYRQTQDNRKKLIAPTQYTQMIGRAG 466
Query: 312 RTGLQESGESIMLCKT-----MQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAANL 366
R+G ++GES ++ ++ M + L S N P+ SS ++ L+ + L
Sbjct: 467 RSG--QAGESFIIARSESPVEMNNILELSK--NIIPDLKSSILEGEEADRYFLQCLTIRL 522
Query: 367 CSSLEDVKTLIKHTLFYQLKSP--EDQQTFLETTLSEIVASLLASKGTMLTMNEAGHLSL 424
+ V++ I+ + + ++ D +T +E+ I + L + M ++ H +
Sbjct: 523 LPP-DGVRSFIEKSFSFSSRNDLISDNKT-IESYCQPIYSRLQNN-----NMIDSNHRT- 574
Query: 425 TSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVI---------PLEYRIP 475
T A + LS + L IYS L + + C+ + +H+L+L I P+ Y P
Sbjct: 575 TKFGMAVAGSSLSIEEGLNIYSILNRAQKSLCIEDEVHLLYLCISSKTASSIRPISYDSP 634
Query: 476 SDGILLSRSKVYDRYTKFHPQTLRVAEALGVTENLVALNV---------TGKLKDEKKAL 526
++ K L V + + N+ ++ G++ DE
Sbjct: 635 -------------QWRKIFENHLHVIQLVTQLSNVQIDHLPDLAHIYGGNGRVNDEIDHC 681
Query: 527 LCRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELWCY 586
L + A IL D++N + ++ Y + +Q ++ +A ++ RFCE L
Sbjct: 682 LDKVMVAVILQDLINERPLKDISYEYKVDLGTIQKVQMESASYAGQINRFCEILGN-GVL 740
Query: 587 KQLLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSS 629
L Q L + ++ +LM +P AR L + G S
Sbjct: 741 AAALNKFRQRLNFAARTDILSLMTIPSCPRDIARTLADRGIMS 783
>gi|14521089|ref|NP_126564.1| ski2-like helicase [Pyrococcus abyssi GE5]
gi|18203529|sp|Q9V0A9.1|HELS_PYRAB RecName: Full=Putative ski2-type helicase
gi|5458306|emb|CAB49795.1| DNA helicase [Pyrococcus abyssi GE5]
gi|380741653|tpe|CCE70287.1| TPA: ski2-like helicase [Pyrococcus abyssi GE5]
Length = 715
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 178/674 (26%), Positives = 281/674 (41%), Gaps = 116/674 (17%)
Query: 10 AKAAEEFK-FYLEEYAGVK-----GQYPPTKRQLNKKSIYICTIEKGSKLI--GSLIQEN 61
A A E+F+ F E G+K G Y L K I I T EK L+ GS +
Sbjct: 79 ALAEEKFREFKDWERLGLKVAMATGDYDSKDEWLGKYDIIIATAEKFDSLLRHGS----S 134
Query: 62 RIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEG 121
I ++ ++VIDE H++ RG LE +++++L QI +SATIGN L+ ++
Sbjct: 135 WIRDVKMLVIDEIHLIGSRDRGATLEFIITQML---GRAQIIGLSATIGNPEELAEWLNA 191
Query: 122 ITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLM 181
+ RP K + V VF DG S + L Y G A
Sbjct: 192 KLIRSDWRPVKLRKGVFYQGFVFWE-DGGSERYNSWEELVYDAVKKGKGA---------- 240
Query: 182 VLIFCSSKIACSNLALRL--QFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECIL 239
L+F + + AL L + + KE + E +L E+L EEN + L + +L
Sbjct: 241 -LVFVNMRRKAEKTALELAKKVKNYLDRKELR--ELRELAESL-EEN--PTNEKLAKALL 294
Query: 240 YGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSY----VGR 295
GVA+HHA L ER L+E+ + G ++++ T TL+AG+N PA RVIIRD++ G
Sbjct: 295 SGVAFHHAGLGRDERVLVEDNFRKGLIKVVVATPTLSAGINTPAFRVIIRDTWRYSEFGM 354
Query: 296 DFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLV 355
+ I + +QM+GRAGR E GE+I++ T + L + PE + S + +++
Sbjct: 355 ERIPVLEVQQMMGRAGRPRYDEVGEAIIVSTTEEPSLVIDHYIKGKPEKLFSQLSNESIL 414
Query: 356 -DLILEVVAANLCSSLEDVKTLIKHTLF-YQLKSPEDQQTFLETTLSEIVASLLASKGTM 413
IL ++A S +++ ++ T + +Q K P LE + I+ LL ++
Sbjct: 415 RSQILALIATFGYSEFKEIYDFLERTFYAHQGKDP----YMLEEKIRRIIYFLLENEFIE 470
Query: 414 LTMNEAGHLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEYR 473
+T+ + + + + + I L + N L HM+ L
Sbjct: 471 VTLED--EIKPLPLGVRTTKLYIDPMTAKIFKDTLPRIEKNPNPLGIFHMISLA------ 522
Query: 474 IPSDGILLSRSKVYDRYTKFHPQTLRVAEALGVTENLVALNVTGKLKDEKKALLCRFFHA 533
D LS SK T L+DE +L+ R
Sbjct: 523 --PDLTPLSYSK----------------------------RETSMLEDEYYSLMDR---- 548
Query: 534 CILYDVLNFDNHQKVAKMYG-----------IQNSHLQNFLNVTSYFASKVYRFCE---- 578
LY L+++N +K + + + + NV +YR E
Sbjct: 549 --LYFELDYENERKFFRAFKTALVLNAWINEVPEGEIVERFNVEP---GDIYRIVETAEW 603
Query: 579 ------ELPELWCYKQLLTDLPQTLMYCRAPNLR----ALMDLPGVKIGRARQLLNAGYS 628
E+ ++ Q + D TL +R LM+LP V RAR L NAG+
Sbjct: 604 LIYSLGEIAKVLEASQEVVDYVNTLRLRVKHGIREELIPLMELPMVGRKRARALYNAGFK 663
Query: 629 SLELIARADAKEMV 642
LE I A E++
Sbjct: 664 DLESIRNAKPSELL 677
>gi|159906146|ref|YP_001549808.1| DEAD/DEAH box helicase domain-containing protein [Methanococcus
maripaludis C6]
gi|159887639|gb|ABX02576.1| DEAD/DEAH box helicase domain protein [Methanococcus maripaludis
C6]
Length = 747
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 114/392 (29%), Positives = 196/392 (50%), Gaps = 31/392 (7%)
Query: 10 AKAAEEFKFYLEEYA--GVK-----GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENR 62
A A E+F + E+Y G+K G + TK L+K I I T EK L+ ++
Sbjct: 76 ALANEKFDEFREKYEKYGIKVGLSIGDFD-TKENLSKFHIIITTSEKLDSLMRHEVE--W 132
Query: 63 IDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGI 122
I+++ L VIDE H++ + +RG LE +++K+ L QI +SATIGN LS ++
Sbjct: 133 INDVSLAVIDEIHLIGDNERGGTLEVILTKLKNLNS--QIVGLSATIGNPEELSNWLNAK 190
Query: 123 TYVENSRPTKHSEYVTVDKRV-FQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLM 181
V+ RP + + + + + F K + ++ +NL D ++ V+
Sbjct: 191 LIVDEWRPVELKKGIYFENELDFVKNPAKKIKQVSRNNL--------TDLIVDSVEEKGS 242
Query: 182 VLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEK--EDLIEALKEENDGKLSTNLEECIL 239
LIFC+SK A + R+ E + K ED++ L + + L ECI
Sbjct: 243 CLIFCNSKRNAVGEAKKHNLTRYLTKNEQHELNKLSEDILSIL--DTPTETCKALSECIK 300
Query: 240 YGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS--YVGRDF 297
GV++HHA LT R+++E+ + +++ICCT TL+AG+NLP +R I+RD+ Y
Sbjct: 301 KGVSFHHAGLTYQHRKIVEDGFRNRLIKVICCTPTLSAGLNLPCRRAIVRDTKRYSQNGL 360
Query: 298 ISLNMY--KQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLV 355
+ + +Q +GRAGR GL GE I+ K ++ + ++ E I S + ++
Sbjct: 361 VDIPRMEIQQCIGRAGRPGLDPYGEGIIYIKNEKEVEKAYEILTGNVENIYSKLANQKVL 420
Query: 356 DL-ILEVVAANLCSSLEDVKTLIKHTLF-YQL 385
+ IL +++ +++ +K+T + YQ
Sbjct: 421 RIHILGLISTGEIKDGQNLVNFMKNTFYAYQF 452
>gi|402585064|gb|EJW79004.1| hypothetical protein WUBG_10087, partial [Wuchereria bancrofti]
Length = 275
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 94/279 (33%), Positives = 147/279 (52%), Gaps = 32/279 (11%)
Query: 68 LIVIDEFHMLNEPQRGPILECVVSKVLYLKKS-IQIFAMSATIGNINALSTFIEGITYVE 126
++VIDEFH+L + RGP++E +V K LY+ + IQI ++SAT+ N++ L+ ++ Y
Sbjct: 1 VLVIDEFHILFDGNRGPLVEQIVGKALYISRHRIQIISLSATLPNLDELADWLNAEKYET 60
Query: 127 NSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLM----V 182
RP + E + D + D +L I + ++ ++ ++HL ++M V
Sbjct: 61 QFRPIQLHEMIMCDNELR---DVNTLQHIRTVSNEFIVSNDIEHGIIHLCTESVMKDESV 117
Query: 183 LIFCSSKIACSNLALRL--QFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTN------- 233
L+FCSSK LAL + F+++ +K E+LI N L T
Sbjct: 118 LVFCSSKAETEKLALAISQHFEKY-----FKSSNSENLISPF---NIQSLKTVKHAFHHE 169
Query: 234 -------LEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRV 286
L E + +G+A+HHA LT ER IE A+ +L+++C TSTL++G+NLPA RV
Sbjct: 170 IQFVDDILRETLPHGIAFHHAGLTVEERESIENAFYDQSLRVLCATSTLSSGINLPAHRV 229
Query: 287 IIRDSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLC 325
II+ G ++ Y QM GRAGR G E G + C
Sbjct: 230 IIKAQLCGPVALNGLTYMQMTGRAGRLGQTEKGYNSANC 268
>gi|448462295|ref|ZP_21597770.1| ski2-like helicase [Halorubrum kocurii JCM 14978]
gi|445818491|gb|EMA68347.1| ski2-like helicase [Halorubrum kocurii JCM 14978]
Length = 816
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 110/394 (27%), Positives = 191/394 (48%), Gaps = 44/394 (11%)
Query: 15 EFKFYLEEYA---GVK-GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENR--IDEIGL 68
EF+ + EE+ GV G Y L + I + T EK + SLI+ ID++
Sbjct: 87 EFERW-EEFGVTVGVSTGNYDSDGEWLATRDIIVATSEK----VDSLIRNGAPWIDDLTC 141
Query: 69 IVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVENS 128
+V DE H++++P RGP LE ++K+ + +Q A+SAT+GN + ++ +++ +
Sbjct: 142 VVSDEVHLVDDPNRGPTLEVTLAKLRKVNPGLQTVALSATVGNADVIAEWLDAELVESDW 201
Query: 129 RP---------TKHSEYVTVDKRVFQSFDGKSLT-EIYADNLDYSLTGSGPDAVLHLVQG 178
RP ++V KR G+ T + AD LD G G +
Sbjct: 202 RPIDLRMGVHFGNAVDFVDGSKREVPVERGEDQTARLVADALDTEEDGQGGSS------- 254
Query: 179 NLMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECI 238
L+F +S+ + A +L + ++ +L + ++ +D +++L + +
Sbjct: 255 ----LVFVNSRRNAESSARKLTDVTGSRLTDDERDTLRELADEIRSGSDTDTASDLADAV 310
Query: 239 LYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRD------SY 292
G A+HHA L + +R +E+A+ ++ I T TLAAGVN PA+RVI+RD +
Sbjct: 311 EQGSAFHHAGLRSEDRARVEDAFRDRLIKCISATPTLAAGVNTPARRVIVRDWRRYDGEF 370
Query: 293 VGRDFISLNMYKQMVGRAGRTGLQESGESIML---CKTMQDFLRFSSMMNAGPEPISSHM 349
G + + QM GRAGR GL GE+++L T ++ F + A PEP+ S +
Sbjct: 371 GGMKPLDVLEVHQMCGRAGRPGLDPYGEAVLLANDADTKEEL--FERYLWADPEPVRSKL 428
Query: 350 DP-PTLVDLILEVVAANLCSSLEDVKTLIKHTLF 382
P L +L VA+ S+ + + + + +TL+
Sbjct: 429 AAEPALRTHVLATVASGFASTRDGLLSFLDNTLY 462
>gi|332797784|ref|YP_004459284.1| DEAD/DEAH box helicase [Acidianus hospitalis W1]
gi|332695519|gb|AEE94986.1| DEAD/DEAH box helicase domain protein [Acidianus hospitalis W1]
Length = 704
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 121/403 (30%), Positives = 192/403 (47%), Gaps = 49/403 (12%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+ EKY L K EE F + G Y L I + T EK I SL +
Sbjct: 83 LTAEKYNEL-KDWEELGFKV---GMTSGDYDSDDAWLKNYDIIVSTYEK----IDSLWRH 134
Query: 61 N--RIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTF 118
N + E+ V+DEFH LN+ +RGP++E V + K + A+SATI N ++ +
Sbjct: 135 NPSWLSEVDYFVLDEFHYLNDEERGPVVESVAIRA----KRKNLLALSATISNYEKIANW 190
Query: 119 IEGITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGP--DAVLHLV 176
+ I N RP E V V+ + KS I+ D + G+ P L+++
Sbjct: 191 LNAIPVTTNWRPVPLREGVIVEGK-------KSYQVIFPDET-IEIKGNDPIIAYTLYVL 242
Query: 177 QGNLMVLIFCSSKIACSNLALRLQFD----RFPGTKEYKKQEK----EDLIEALKEENDG 228
+ VL+F +S+ + A ++ P + K E+ ED KEE
Sbjct: 243 EHGGQVLVFRNSRKMAESTAKKISSSMGLLSLPDKELLKVGEEIKNVEDAGSDEKEE--- 299
Query: 229 KLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVII 288
L E ++ GVA+HHA L+ G R +IE A+ +++I T TLAAGVNLPA+ VII
Sbjct: 300 -----LYELVVRGVAFHHAGLSKGLREIIERAFRERKIKVIVATPTLAAGVNLPARAVII 354
Query: 289 RDSY------VG-RDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLR-FSSMMNA 340
D + +G ++ I + YKQM GRAGR G + GE++++ + ++ + F + +
Sbjct: 355 GDFHRFNRKILGYQEEIPIMEYKQMAGRAGRPGFDKEGEAVIVVRNKKEAEKVFKKYILS 414
Query: 341 GPEPISSHM-DPPTLVDLILEVVAANLCSSLEDVKTLIKHTLF 382
PEPI S + + +L ++++ S +D++ TL
Sbjct: 415 PPEPIESRLGNESAFYSFLLGIISSEKKISEDDLEDYAMDTLL 457
>gi|407464097|ref|YP_006774979.1| DEAD/DEAH box helicase [Candidatus Nitrosopumilus sp. AR2]
gi|407047285|gb|AFS82037.1| DEAD/DEAH box helicase [Candidatus Nitrosopumilus sp. AR2]
Length = 708
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 114/363 (31%), Positives = 181/363 (49%), Gaps = 20/363 (5%)
Query: 28 GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILE 87
G + ++ L K ++ I T EK +I ++ +D+IGL++ DE H++ + RGP LE
Sbjct: 107 GDFENIEKNLEKSNVLILTNEKMDSIIRHGVE--WVDDIGLVISDEVHLIGDESRGPTLE 164
Query: 88 CVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSF 147
+++++ L+ QI +SATI N + ++ ++E + RP SE V V +
Sbjct: 165 MILTQLKLLETKPQIVGLSATITNSDEIADWLECKLVKNDWRPVPLSEGVCDAGEVTMN- 223
Query: 148 DGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRLQ--FDRFP 205
DGK+ ++ SL G+ D + VQ L+F ++ +LA + +
Sbjct: 224 DGKTF------EVERSLRGTPIDLGVQSVQQGGQSLVFAETRTRSKSLATKAADAISQIL 277
Query: 206 GTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGT 265
KE + EK + L E +L L + GVA+HHA L R IE + GT
Sbjct: 278 EKKEISELEKTSK-KLLAENEHTELVKTLALLVKKGVAFHHAGLNQKCRETIEAEFRKGT 336
Query: 266 LQIICCTSTLAAGVNLPAQRVIIR-----DSYVGRDF-ISLNMYKQMVGRAGRTGLQESG 319
++++ T TLAAGVNLPA+RV+I ++ VG + IS+ YKQ+ GRAGR + G
Sbjct: 337 IKLLSSTPTLAAGVNLPARRVVISNVNRYNAKVGANRPISILEYKQLCGRAGRPQYDDYG 396
Query: 320 ESIMLCKTMQDFLRFSSMMNAGPEPISSHM-DPPTLVDLILEVVAANLCSSLEDVKTLIK 378
ESI++ D L +N PEPI S + D +L IL V+ + E++
Sbjct: 397 ESIIVGNGNTDDL-IEYYINGEPEPIESKITDDKSLRTHILSVIVTHPGIKKEEILEFFL 455
Query: 379 HTL 381
TL
Sbjct: 456 QTL 458
>gi|452208595|ref|YP_007488717.1| ATP-dependent DNA helicase Hel308 [Natronomonas moolapensis 8.8.11]
gi|452084695|emb|CCQ38043.1| ATP-dependent DNA helicase Hel308 [Natronomonas moolapensis 8.8.11]
Length = 769
Score = 143 bits (360), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 169/696 (24%), Positives = 303/696 (43%), Gaps = 80/696 (11%)
Query: 14 EEFKFYLEEYA---GVK-GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENR--IDEIG 67
EEF+ + E Y GV G Y T L K + + T EK + SL++ +D++
Sbjct: 86 EEFEAF-EPYGVSIGVATGNYEDTGEWLTGKDVIVATSEK----VDSLVRNGAPWVDDLD 140
Query: 68 LIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVEN 127
+V DE H++++P RGP LE ++K+ + ++Q+ A+SAT+GN ++ +++
Sbjct: 141 CVVSDEVHLVDDPNRGPTLEVTLAKLRRINPNLQVVALSATVGNAGEMAEWLDAELVDSA 200
Query: 128 SRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLM----VL 183
RP + V + + F S E+ GS +V+ L L
Sbjct: 201 WRPIELKTGVQYGQALH--FGDGSQRELR--------VGSNEKPTEAIVRDTLAEDGSTL 250
Query: 184 IFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVA 243
+F +S+ A RL G E ++++ DL E ++ +D + S +L C+ G A
Sbjct: 251 VFVNSRRNAEGAAKRLANTSCDGLDEDERRQLTDLAEEIRGVSDTETSEDLAACVEKGAA 310
Query: 244 YHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYV------GRDF 297
+HHA ++ R ++E+A+ ++++ T TLAAGVN P++RV++RD G
Sbjct: 311 FHHAGCSSEHRSIVEDAFRDRLIKVVSATPTLAAGVNTPSRRVVVRDWRRYSGEAGGMKP 370
Query: 298 ISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLR-FSSMMNAGPEPISSHM-DPPTLV 355
+S+ QM+GRAGR G GE+++L K+ + + A PEP+ S + P++
Sbjct: 371 LSVLEVHQMMGRAGRPGRDPYGEALLLAKSHDELDELLDRYVWADPEPVESKLAREPSMR 430
Query: 356 DLILEVVAANLCSSLEDVKTLIKHTLF---YQLKSPEDQQTFLE-----------TTLSE 401
+L VA+ S + + TL+ Y+ + D +T + L
Sbjct: 431 THLLATVASGFADSRAALLNFLDRTLYATQYRRGAGSDDETDTDGRRDPRDGAARDNLER 490
Query: 402 IVASLLASKGTMLTMNEAGHLSLTSIAKAAVQAGLSHDVCLII-----YSDLLHNKLNFC 456
IV S L ++ G + T+ L H V + +++L
Sbjct: 491 IVDSTLEYLDANDFIDRDGTIGATN---------LGHTVSRLYLDPMSAAEVLDGLEGAS 541
Query: 457 LLNSLHMLFLVIPLEYRIPSDGILLSRSKVYDRYTKFHPQTLRVAEALGVTENLVALNVT 516
++ + LV R P L RS + YT + R +E LG +
Sbjct: 542 TPTAMGLYHLV----SRTPDMYELYLRSGDREEYTMVAYE--RESEFLGA--------IP 587
Query: 517 GKLKDEK-KALLCRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYR 575
+ ++E+ + L A +L D + + ++A+ YG+ ++ ++ +
Sbjct: 588 SEFEEERFEDWLSALKTARMLEDWASELDEDEIAERYGVGPGDIRGKVDTAEWLLGAAES 647
Query: 576 FCEELPELWCYKQLLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIAR 635
EL L C + + Q + + L L + GV RAR+L +AG + +
Sbjct: 648 LAGELG-LECVPT-IREARQRVKHGVGEELIDLAGVRGVGRKRARRLYDAGIETRADLRE 705
Query: 636 ADAKEMVAKIRHLPLRSARNLISAAKLHFITKMDKV 671
AD ++ +R ++A N++ AA H + MD V
Sbjct: 706 ADKAVVLGALRGR-TKTAENVLEAAG-HPDSGMDGV 739
>gi|448292358|ref|ZP_21482977.1| ATP-dependent DNA helicase [Haloferax volcanii DS2]
gi|445572695|gb|ELY27226.1| ATP-dependent DNA helicase [Haloferax volcanii DS2]
Length = 577
Score = 143 bits (360), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 117/411 (28%), Positives = 180/411 (43%), Gaps = 39/411 (9%)
Query: 28 GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENR--IDEIGLIVIDEFHMLNEPQRGPI 85
G + + +L I + T EK + S I+ +D + +V+DE H+L P RGP
Sbjct: 35 GDFDAAEEELGDHDIVVATSEK----VDSAIRNGAPWVDRLACVVVDEVHLLGAPGRGPT 90
Query: 86 LECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQ 145
LE +S + +Q+ A+SAT+ N A++ +++ RP V D+ V
Sbjct: 91 LEVTLSTLQRRVPDLQLVALSATVDNPEAIADWLDAELVESAWRPVSLRTGVYADEAV-- 148
Query: 146 SFDGKSLTEIYADNLDYSLTGSGP------DAVLHLVQGNL----MVLIFCSSKIACSNL 195
FD + +LD + +GP +A + LV+ + L F S+ L
Sbjct: 149 EFDDGT-------DLDVVVPPTGPNDDEATEATVALVEDAVETGGQCLAFVRSRREAEAL 201
Query: 196 ALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERR 255
A RL + + L + L E L EC GV +HHA L + R
Sbjct: 202 ADRL--------ADEELSPAPTLGDELDELGGTATGRQLSECARTGVGFHHAGLRSAHRV 253
Query: 256 LIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS--YVGR--DFISLNMYKQMVGRAG 311
+E A+ L +IC T TLAAGVN+PA+RV+IRD Y G ++I + QM GRAG
Sbjct: 254 AVENAFRDRRLAVICATPTLAAGVNVPARRVVIRDQKRYTGDAMEWIPVLDVHQMCGRAG 313
Query: 312 RTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHM-DPPTLVDLILEVVAANLCSSL 370
R L GE++++ + A E + S DP L +L VVA+ SL
Sbjct: 314 RPHLDPFGEAVLVGDADTKAELVDRYVTADAEAVDSQFADPEALRTHVLSVVASGFADSL 373
Query: 371 EDVKTLIKHTLFYQLKSPEDQQTFLETTLSEIVA-SLLASKGTMLTMNEAG 420
+ V + T + D + +S++ A LL + G L+ G
Sbjct: 374 DGVADVFSATYYAHQHPSVDLADLVADVVSDLEAMELLDATGETLSATALG 424
>gi|432114606|gb|ELK36447.1| DNA polymerase theta [Myotis davidii]
Length = 2190
Score = 143 bits (360), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 121/436 (27%), Positives = 210/436 (48%), Gaps = 42/436 (9%)
Query: 249 LTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGRDFISLNMYKQMVG 308
LT ER +IE A+ G ++++ TSTL++GVNLPA+RVIIR + + YKQMVG
Sbjct: 34 LTFEERDIIEGAFRQGQIRVLAATSTLSSGVNLPARRVIIRTPIFSGRTLDVLTYKQMVG 93
Query: 309 RAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMD-------PPTLVDLILEV 361
RAGR G+ GESI++CK + + +++ +P+ S + P+++ ILE+
Sbjct: 94 RAGRKGVDTVGESILICKNSEKS-KGIALLQGSLKPVRSCLRRREGEEVTPSMIRAILEI 152
Query: 362 VAANLCSSLEDVKTLIKHTLF----------YQLKSPEDQQTFLETTL-----SEIVASL 406
+ + S+ +D++T T Q Q +E+ + +E + +
Sbjct: 153 IVGGVASTSQDMQTYASCTFLAASMREGKRGIQKNQDPVQLGAIESCVMWLLENEFIQTT 212
Query: 407 LASKGTMLTMNEAGHLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFL 466
AS GT + HL A + + LS L I++DL F L N LH+++L
Sbjct: 213 EASDGTEGKVYHPTHL-----GSATLSSSLSPADTLDIFADLQRAMKGFVLENDLHIVYL 267
Query: 467 VIPLEYRIPSDGILLSRSKVYDRYTKFHPQTLRVAEALGVTENLVALNVTGKL--KDEKK 524
V P+ D + + + K RVAE +GV E +A V GK+ + E++
Sbjct: 268 VTPMF----EDWTTIDWYRFLCLWEKLPTSMKRVAELVGVEEGFLARCVKGKVVARTERQ 323
Query: 525 ----ALLCRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEEL 580
A+ RFF + +L D+++ +++ + YG +Q+ + +A + F L
Sbjct: 324 HRQMAIHKRFFTSLVLLDLISEVPLKEINRKYGCNRGQVQSLQQSAAVYAGMITVFSNRL 383
Query: 581 PELWCYKQ-LLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIARADAK 639
W + LL+ + L + L L+ + + RAR L +G+ ++ +ARA+
Sbjct: 384 G--WHNMELLLSQFQKRLTFGIQRELCDLIRVSLLNAQRARFLYASGFLTVADLARANIP 441
Query: 640 EMVAKIRH-LPLRSAR 654
E+ +R+ +P +SAR
Sbjct: 442 EVETVLRNAVPFKSAR 457
>gi|67619641|ref|XP_667658.1| DNA helicase HEL308 [Cryptosporidium hominis TU502]
gi|54658820|gb|EAL37435.1| DNA helicase HEL308 [Cryptosporidium hominis]
Length = 1153
Score = 143 bits (360), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 163/590 (27%), Positives = 263/590 (44%), Gaps = 119/590 (20%)
Query: 1 MVHEKYQSLAKAAEEF-KFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQ 59
+V EK S KA E + E+ G P + + I + TIEK + LI IQ
Sbjct: 196 LVSEKRDSYYKAGGEVCGLRISEFH--YGSKSPLFEEFD---IGVATIEKANALISYYIQ 250
Query: 60 ENRI-DEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKK------SIQIFAMSATIGNI 112
+ +G+IV+DE H+L + QRG ILE +++KV L K +IQI MSAT+ N+
Sbjct: 251 HGILFKRLGIIVVDELHLLGDEQRGYILEVMLTKVRLLSKLQGEGRTIQIVGMSATLPNL 310
Query: 113 NALSTFIEGITYVENSRPTKHSEYVTV------------DKRVFQSFDGKSLTEIYA--- 157
+ +++ + Y N RP E++ + +K +S +L+++ +
Sbjct: 311 RDIGLWLDAVVYQSNFRPVPLREHIIIKGKAYIKPGKDQNKSTLRSSVQDTLSKVMSWDF 370
Query: 158 -------DNLDYSLTGSGP--------DAVLHLVQG------NLMVLIFCSSKIACSNLA 196
++ D+ + G D LV G VL+FC SK + + A
Sbjct: 371 HQVNSKFNSTDFDIDQIGSSRWKYPIVDMSELLVIGWEALKKGESVLVFCPSKYSVESTA 430
Query: 197 L------RLQF----------DRFPGTKEYKKQEKEDLIEALKEENDGKLS-------TN 233
L + QF + + + E++ + A + + LS
Sbjct: 431 LFFANCIKGQFCEGIDIENCSNSQQIMQSLRSVERQRYMLAEEIRQNSSLSKRSIQNNNT 490
Query: 234 LEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYV 293
L +CI+ G+ +HH+ L+ ERR++E+ Y G L ++ TSTLAAGVNLP++RVI R +
Sbjct: 491 LIDCIIKGIGFHHSGLSHIERRIVEKGYKNGILSLLTATSTLAAGVNLPSKRVIFRGINI 550
Query: 294 GRDFISLNMYKQMVGRAGRTGLQES-GES-IMLCKTMQDFLRFSS--------MMNAGPE 343
G+ F++ YKQM GRAGR G + + GES I++ +T+ R S ++ A +
Sbjct: 551 GKSFLTCVDYKQMSGRAGRAGQKGAFGESFILVNETLSQPGREVSEEVENALGLITADMK 610
Query: 344 PISSHMDPPT--LVDLILEVVA--------------------ANLCSSLEDVKTLIKHTL 381
P+ S T + LILE++A + S+ D+ L + TL
Sbjct: 611 PLMSSFFTNTNGITRLILEILAVLFEFDQNISVNNREKIPDKGSYTGSILDL--LTESTL 668
Query: 382 F-YQLKSPED-QQTFLET--TLSEIVASLLASKGTMLTMNEAGHLSL---------TSIA 428
YQ+K D +L+ L + LL K M + +S+ T +
Sbjct: 669 MSYQIKLYNDLSHEYLKNIDALERALNYLLEKKMIMNREKKTNPISIGGYTLNCCCTQLG 728
Query: 429 KAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEYRIPSDG 478
KA V +GLS L +Y +L N + L + +M +LV P S+G
Sbjct: 729 KAIVSSGLSPSTGLELYDELRRNMESTFLGDLTYMSYLVTPFPPNEISNG 778
>gi|448561400|ref|ZP_21634752.1| ATP-dependent DNA helicase Hel308b [Haloferax prahovense DSM 18310]
gi|445721632|gb|ELZ73300.1| ATP-dependent DNA helicase Hel308b [Haloferax prahovense DSM 18310]
Length = 639
Score = 142 bits (359), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 119/419 (28%), Positives = 188/419 (44%), Gaps = 47/419 (11%)
Query: 28 GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENR--IDEIGLIVIDEFHMLNEPQRGPI 85
G + + +L I + T EK + S I+ ++ + +V+DE H+L P RGP
Sbjct: 97 GDFDADEAELGDHDIVVATSEK----VDSAIRNGAPWVERLACVVVDEVHLLGAPGRGPT 152
Query: 86 LECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQ 145
LE ++ + +Q+ A+SAT+ N ++ +++ RP V D+ V
Sbjct: 153 LEVTLATLQRRVPDLQLVALSATVDNPEVIADWLDAALVESTWRPVSLRTGVYADETV-- 210
Query: 146 SFDGKSLTEIYADNLDYSLTGSGP------DAVLHLVQGNL----MVLIFCSSKIACSNL 195
FD + +LD + +GP +A + LV+ + L F S+ L
Sbjct: 211 EFDDGT-------DLDVVVPPTGPNDDEATEATVALVEDAVETGGQCLAFVRSRREAEAL 263
Query: 196 ALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERR 255
A DR G D ++ L G+ L EC GV +HHA L + R
Sbjct: 264 A-----DRLAGEDLSPAPALGDELDELGGTATGR---QLSECARTGVGFHHAGLRSAHRV 315
Query: 256 LIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS--YVGRD--FISLNMYKQMVGRAG 311
+E A+ L +IC T TLAAGVN+PA+RV+IRD Y G +I + QM GRAG
Sbjct: 316 AVENAFRDRRLAVICATPTLAAGVNVPARRVVIRDQKRYTGDSMAWIPVLDVHQMCGRAG 375
Query: 312 RTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPP-TLVDLILEVVAANLCSSL 370
R L GE++++ F + A E + S D P L +L VVA+ SL
Sbjct: 376 RPHLDPFGEAVLVGDADTKAELFDRYVTADAEAVDSQFDDPEALRTHVLSVVASGFADSL 435
Query: 371 EDVKTLIKHTLFYQLKSPEDQQTFLETTLSEIVASLLASKGTMLTMNE-AGHLSLTSIA 428
+ V + T +Y ++P L+E+VA +++ M ++ G LS T++
Sbjct: 436 DGVADVFSAT-YYAHQNP-------SVDLAELVADVVSELEAMELLDATGGTLSATTLG 486
>gi|292655131|ref|YP_003535028.1| ATP-dependent DNA helicase Hel308b [Haloferax volcanii DS2]
gi|291370171|gb|ADE02398.1| ATP-dependent DNA helicase Hel308b [Haloferax volcanii DS2]
Length = 639
Score = 142 bits (359), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 117/411 (28%), Positives = 180/411 (43%), Gaps = 39/411 (9%)
Query: 28 GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENR--IDEIGLIVIDEFHMLNEPQRGPI 85
G + + +L I + T EK + S I+ +D + +V+DE H+L P RGP
Sbjct: 97 GDFDAAEEELGDHDIVVATSEK----VDSAIRNGAPWVDRLACVVVDEVHLLGAPGRGPT 152
Query: 86 LECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQ 145
LE +S + +Q+ A+SAT+ N A++ +++ RP V D+ V
Sbjct: 153 LEVTLSTLQRRVPDLQLVALSATVDNPEAIADWLDAELVESAWRPVSLRTGVYADEAV-- 210
Query: 146 SFDGKSLTEIYADNLDYSLTGSGP------DAVLHLVQGNL----MVLIFCSSKIACSNL 195
FD + +LD + +GP +A + LV+ + L F S+ L
Sbjct: 211 EFDDGT-------DLDVVVPPTGPNDDEATEATVALVEDAVETGGQCLAFVRSRREAEAL 263
Query: 196 ALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERR 255
A RL + + L + L E L EC GV +HHA L + R
Sbjct: 264 ADRL--------ADEELSPAPTLGDELDELGGTATGRQLSECARTGVGFHHAGLRSAHRV 315
Query: 256 LIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS--YVGR--DFISLNMYKQMVGRAG 311
+E A+ L +IC T TLAAGVN+PA+RV+IRD Y G ++I + QM GRAG
Sbjct: 316 AVENAFRDRRLAVICATPTLAAGVNVPARRVVIRDQKRYTGDAMEWIPVLDVHQMCGRAG 375
Query: 312 RTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHM-DPPTLVDLILEVVAANLCSSL 370
R L GE++++ + A E + S DP L +L VVA+ SL
Sbjct: 376 RPHLDPFGEAVLVGDADTKAELVDRYVTADAEAVDSQFADPEALRTHVLSVVASGFADSL 435
Query: 371 EDVKTLIKHTLFYQLKSPEDQQTFLETTLSEIVA-SLLASKGTMLTMNEAG 420
+ V + T + D + +S++ A LL + G L+ G
Sbjct: 436 DGVADVFSATYYAHQHPSVDLADLVADVVSDLEAMELLDATGETLSATALG 486
>gi|336122268|ref|YP_004577043.1| ski2-type helicase [Methanothermococcus okinawensis IH1]
gi|334856789|gb|AEH07265.1| ski2-type helicase [Methanothermococcus okinawensis IH1]
Length = 775
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 122/408 (29%), Positives = 202/408 (49%), Gaps = 42/408 (10%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVK-----GQYPPTKRQLNKKSIYICTIEKGSKLIG 55
+ +EKY EEFK E+Y G+K G + K L + I T EK LI
Sbjct: 78 LANEKY-------EEFKGKYEKY-GLKIALSIGDFD-EKEDLKGYDLIITTAEKLDSLIR 128
Query: 56 SLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINAL 115
++ I +I ++VIDE H++ + RG LE V+ L KK+IQI +SATIGN L
Sbjct: 129 HKVE--WIKDISVVVIDEIHLIGDESRGGTLE-VLLTKLKTKKTIQIIGLSATIGNPEEL 185
Query: 116 STFIEGITYVENSRPTKHSEYVTVDKRV-FQSFDGKSLTEIYADNLDYSLTGSGPDAVLH 174
+ ++ V+ RP K + + ++ F +G ++ E+ D + + + +
Sbjct: 186 AKWLNAELIVDEWRPVKLKKGIGYGNKIMFIDDNGNTINEVIVDEI-------SKNNMFN 238
Query: 175 LVQGNLM----VLIFCSSKIACSNLALRLQFDRFPGTKEYK--KQEKEDLIEALKEENDG 228
LV +++ +IFC+SK A +L ++ E + KE+++ L +N
Sbjct: 239 LVVDSILKDGSCIIFCNSKRGAVGEAKKLNLKKYLSPDEISELRHLKEEVLSVL--DNPT 296
Query: 229 KLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVII 288
K +L ECI GVA+HHA LT +R+++EE + ++ ICCT TL+AG+N+P +R II
Sbjct: 297 KTCKDLAECIEKGVAFHHAGLTYEQRKIVEEGFRKKLIKAICCTPTLSAGINMPCRRAII 356
Query: 289 RD--SYVGRDFISLNMYK--QMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMN---AG 341
RD + R +I + + Q +GRAGR L GE I+ ++ + N
Sbjct: 357 RDLKRFSSRGYIPIPKMEIHQCIGRAGRPNLDPYGEGIIYINNTENPELIENAKNYLIGN 416
Query: 342 PEPISSHM-DPPTLVDLILEVVAANLCSSLEDVKTLIKHTLF-YQLKS 387
E I S + + L +L ++ + D++ IK+T + YQ ++
Sbjct: 417 VEEIYSKLSNQKVLRTHMLGLITTGDIKNKNDLEEFIKNTFYAYQYQN 464
>gi|374724165|gb|EHR76245.1| ski2-like helicase [uncultured marine group II euryarchaeote]
Length = 872
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 119/411 (28%), Positives = 192/411 (46%), Gaps = 44/411 (10%)
Query: 28 GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENR---IDEIGLIVIDEFHMLNEPQRGP 84
G +++ + + +CT EK L+ NR + + ++V DEFH++N+ RGP
Sbjct: 111 GDASAEAKKIEECDVLVCTSEKLDSLM-----RNRSELMANVSIVVADEFHLMNDATRGP 165
Query: 85 ILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVT-----V 139
LE ++++ +L+ QI A+SAT+GN L+T+++ + + RP EY T +
Sbjct: 166 TLEINLTRLRHLRPKAQIIALSATVGNCQDLATWLDATLVLSDWRPVAL-EYSTFHDMHL 224
Query: 140 DKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVL--HLVQGNLMVLIFCSSKIACSNLAL 197
+ R+ QS S + D S P V+ + VL+F ++ + + AL
Sbjct: 225 EPRLVQSSAMSSDGDALQPPRDLEGPKSHPTWVVVNDTIDQEGQVLVFVGTRRSAQSEAL 284
Query: 198 RLQFDRFPGTKEYKKQEKED---------LIEALKEENDGKLSTNLEECILYGVAYHHAD 248
+L + K+ KED + L+ ++ L I G A+HHA
Sbjct: 285 KLS------KRVLKRLTKEDPDRVKRLAVFADRLEGGQQTAMAERLATAIRGGFAFHHAG 338
Query: 249 LTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGRDFISLNM----YK 304
LT G+R+ IE A+ G L + T TLAAGVNLPA+RV++RD D +S + +
Sbjct: 339 LTHGQRKAIEGAFKDGLLVGLAATPTLAAGVNLPARRVLVRDLKRWDDGMSRPLPVMEVR 398
Query: 305 QMVGRAGRTGLQESGESIMLCKTMQDFL---RFSSMMNAGP-EPISSHMDP-PTLVDLIL 359
QM+GRAGR GE+ +LCK + S GP E ISS + P L +L
Sbjct: 399 QMLGRAGRPKYDAFGEAWVLCKGTDGWAIADDVSRRYFFGPVESISSKLSSEPALRTHLL 458
Query: 360 EVVAANLCSSLEDVKTLIKHTLFYQLKSPEDQQTFLETTLSEIVASLLASK 410
+AA ++ + T SP T+L+ L ++ L+A +
Sbjct: 459 AAIAAGGFRHRGELGEFFQATFLGASVSP----TYLKEQLDRMLDWLVAER 505
>gi|448407475|ref|ZP_21573782.1| ski2-like helicase [Halosimplex carlsbadense 2-9-1]
gi|445675313|gb|ELZ27845.1| ski2-like helicase [Halosimplex carlsbadense 2-9-1]
Length = 808
Score = 142 bits (357), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 119/429 (27%), Positives = 211/429 (49%), Gaps = 31/429 (7%)
Query: 14 EEFKFYLEEYA---GVK-GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENR--IDEIG 67
EEF+ + E+Y GV G Y L K I + T EK + SL++ + +D++
Sbjct: 86 EEFEQF-EQYGLDVGVSTGNYESEGGWLATKDIVVATSEK----VDSLVRNDAPWLDDLT 140
Query: 68 LIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVEN 127
+V DE H++++ QRGP LE ++K+ L +Q A+SATIGN AL+ +++ +
Sbjct: 141 CVVSDEVHLVDDGQRGPTLEVTLAKLRQLNPDLQTVALSATIGNAEALAEWLDAALVDSD 200
Query: 128 SRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCS 187
RP + V + + + S +E+ N + V ++ L+F +
Sbjct: 201 WRPIDLKKGVHYGQALH--LEDGSQSELPVRNSEKPTAA----IVRDTLEDEGSTLVFVN 254
Query: 188 SKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHA 247
S+ A RL P ++ + ++ + ++E +D S +L E + G A+HHA
Sbjct: 255 SRRNAEAAAGRLASTVEPHLTADERDQLAEVADEIREVSDTDTSDDLAEAVEGGAAFHHA 314
Query: 248 DLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIR------DSYVGRDFISLN 301
L +G R L+EEA+ ++++ T TLAAGVN P++RV++R + G +S+
Sbjct: 315 GLASGHRSLVEEAFRDRLVKVVSATPTLAAGVNTPSRRVVVRDWRRYDGTAGGMQPLSVL 374
Query: 302 MYKQMVGRAGRTGLQESGESIMLCKTMQDFLR-FSSMMNAGPEPISSHMDP-PTLVDLIL 359
QM+GRAGR GL GE++++ + + F + A PEP+ S + P L IL
Sbjct: 375 EVHQMMGRAGRPGLDPYGEALLIANSHDELDELFERYVWADPEPVESKLAAEPALRTHIL 434
Query: 360 EVVAANLCSSLEDVKTLIKHTLFYQLKSPEDQQTFLETTLSEIVASLLASKGTMLTMNEA 419
VA+ +S E + ++ TL+ + ++ LE + +++ L ++ +
Sbjct: 435 ATVASGFANSREGLLEFLEGTLYASQTT---ERGRLERVMDDMIEYLERNE---FMERDG 488
Query: 420 GHLSLTSIA 428
G L+ TS+
Sbjct: 489 GDLAATSLG 497
>gi|448541695|ref|ZP_21624319.1| ATP-dependent DNA helicase Hel308b, partial [Haloferax sp. ATCC
BAA-646]
gi|445707574|gb|ELZ59427.1| ATP-dependent DNA helicase Hel308b, partial [Haloferax sp. ATCC
BAA-646]
Length = 566
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 122/423 (28%), Positives = 191/423 (45%), Gaps = 55/423 (13%)
Query: 28 GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENR--IDEIGLIVIDEFHMLNEPQRGPI 85
G + + +L I + T EK + S I+ +D + +V+DE H+L P RGP
Sbjct: 24 GDFDAAEEELGDHDIVVATSEK----VDSAIRNGAPWVDRLACVVVDEVHLLGAPGRGPT 79
Query: 86 LECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQ 145
LE +S + +Q+ A+SAT+ N A++ +++ RP V D+ V
Sbjct: 80 LEVTLSTLQRRVPDLQLVALSATVDNPEAIADWLDAELVESTWRPVSLRTGVYADETV-- 137
Query: 146 SFDGKSLTEIYADNLDYSLTGSGP------DAVLHLVQGNL----MVLIFCSSKIACSNL 195
FD + +LD + +GP +A + LV+ + L F S+ L
Sbjct: 138 EFDDGT-------DLDVVVPPTGPNDDEATEATVALVEDAVETGGQCLAFVRSRREAEAL 190
Query: 196 ALRLQFDRFPGTKEYKKQEKEDLIEALKEEND--GKLSTN--LEECILYGVAYHHADLTA 251
A RL E+ AL +E D G +T L C GV +HHA L +
Sbjct: 191 ADRL------------ADEELSPAPALGDELDELGGTATGRQLSACARTGVGFHHAGLRS 238
Query: 252 GERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS--YVGR--DFISLNMYKQMV 307
R +E A+ L +IC T TLAAGVN+PA+RV+IRD Y G ++I + QM
Sbjct: 239 AHRVAVENAFRDRRLAVICATPTLAAGVNVPARRVVIRDQKRYTGDAMEWIPVLDVHQMC 298
Query: 308 GRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHM-DPPTLVDLILEVVAANL 366
GRAGR L GE++++ + A E + S DP L +L VVA+
Sbjct: 299 GRAGRPHLDPFGEAVLVGDADTKAELVDRYVTADAEAVDSQFADPEALRTHVLSVVASGF 358
Query: 367 CSSLEDVKTLIKHTLFYQLKSPEDQQTFLETTLSEIVASLLASKGTMLTMNEAGH-LSLT 425
SL+ V + T +Y ++P L+++VA +++ M ++ G LS T
Sbjct: 359 ADSLDGVADVFSAT-YYAHQNP-------NVDLADLVAEVVSDLEAMELLDATGETLSAT 410
Query: 426 SIA 428
++
Sbjct: 411 TLG 413
>gi|354609904|ref|ZP_09027860.1| ski2-type helicase [Halobacterium sp. DL1]
gi|353194724|gb|EHB60226.1| ski2-type helicase [Halobacterium sp. DL1]
Length = 787
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 109/398 (27%), Positives = 197/398 (49%), Gaps = 34/398 (8%)
Query: 28 GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENR--IDEIGLIVIDEFHMLNEPQRGPI 85
G Y +L+ I + T EK + SL++ ID++ +V DE H++++ RGP
Sbjct: 103 GNYQSDGERLSDNDIVVATSEK----VDSLVRNGAGWIDDLACVVADEVHLVDDEHRGPT 158
Query: 86 LECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQ 145
LE ++K+ +Q+ A+SAT+GN ++ +++ + RP +D R
Sbjct: 159 LEVTLAKLRQRVTDLQVVALSATVGNAGEIADWLDAELVDTDWRP--------IDLRTGV 210
Query: 146 SFDGKSLTEIYADNLDYSLT-GSGPDA---VLHLVQGNLMVLIFCSSKIACSNLALRLQF 201
+ G+++ Y D L+ GSG V ++ + L+F +S+ A RL
Sbjct: 211 HY-GQAVH--YDDGTQEELSVGSGSQTAAVVADTLKDDGSTLVFVNSRRNAEAAARRLS- 266
Query: 202 DRFPGTKEYKKQEK-EDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEA 260
D G+ + ++E+ ++ E ++ +D + S +L + + G A+HHA L R L+E+A
Sbjct: 267 DVTKGSLDADQRERLREVAEEIRGVSDTETSDDLADAVAKGAAFHHAGLAREHRELVEDA 326
Query: 261 YLAGTLQIICCTSTLAAGVNLPAQRVIIRD------SYVGRDFISLNMYKQMVGRAGRTG 314
+ ++++ T TLAAGVN P++RV++RD + G +S+ QM GRAGR G
Sbjct: 327 FRERLIRVVAATPTLAAGVNTPSRRVVVRDWQRYDGTAGGMQPLSVLEVHQMFGRAGRPG 386
Query: 315 LQESGESIMLCKTMQDFLR-FSSMMNAGPEPISSHMDP-PTLVDLILEVVAANLCSSLED 372
L GE+++L + F + A P+P+ S + P L +L VA ++ E
Sbjct: 387 LDPYGEAVLLANGHDELEELFDRYIYADPDPVRSKLAAEPALRTHVLAAVATGFTTTEEA 446
Query: 373 VKTLIKHTLFYQLKSPEDQQTFLETTLSEIVASLLASK 410
+ + TL+ + D LE+ +++A L A++
Sbjct: 447 LHEFLGETLY---AAQTDDPGRLESVARDVLAYLEANE 481
>gi|389852192|ref|YP_006354426.1| DNA/RNA helicase [Pyrococcus sp. ST04]
gi|388249498|gb|AFK22351.1| putative DNA/RNA helicase [Pyrococcus sp. ST04]
Length = 723
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 177/667 (26%), Positives = 287/667 (43%), Gaps = 97/667 (14%)
Query: 10 AKAAEEFK-FYLEEYAGVK-----GQYPPTKRQLNKKSIYICTIEKGSKLI--GSLIQEN 61
A A E+FK F E AG++ G Y + L K I I T EK L+ GS +
Sbjct: 79 ALAEEKFKEFKDWEKAGLRVAVATGDYDSSDEWLGKYDIIIATAEKFDSLLRHGS----S 134
Query: 62 RIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEG 121
I+++ +IV DE H++ RG LE +++ +L QI +SAT+GN L+ ++
Sbjct: 135 WIEDVKVIVADEIHLIGSRDRGATLEVILTHML---GRAQIIGLSATVGNPEELAKWLNA 191
Query: 122 ITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLM 181
V RP V + + VF G L E + + S D V V+
Sbjct: 192 ELIVNEWRP------VELRRGVFSQ--GMVLWE----DGEIDRFPSWEDLVYDAVRKGKG 239
Query: 182 VLIFCSSKIACSNLALRL--QFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECIL 239
L+F + + AL L + RF KE K +L E+L EEN + L + +L
Sbjct: 240 ALVFVNMRRKAERTALELSKEVKRFLSRKEVTKLR--ELAESL-EEN--PTNEKLAKALL 294
Query: 240 YGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSY----VGR 295
GVA+HHA L ER L+EE + G ++++ T TLAAG+N PA RVIIRD + G
Sbjct: 295 GGVAFHHAGLGRDERVLVEENFRKGLIKVVVATPTLAAGINTPAFRVIIRDVWRYSEFGM 354
Query: 296 DFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHM-DPPTL 354
+ I + +QM+GRAGR + GE+I++ T + +N PE + S + + L
Sbjct: 355 ERIPVLEVQQMMGRAGRPKYDDKGEAIIISTTENPSDIINLYINGKPEKLFSQLSNESNL 414
Query: 355 VDLILEVVAANLCSSLEDVKTLIKHTLF-YQLKSPEDQQTF-LETTLSEIVASLLASKGT 412
+L ++A + ++ I+ T + YQ + T+ +E + EI+ L+ ++
Sbjct: 415 RGQVLALIATFGVKTFPEILKFIEKTFYAYQRRD-----TYSIERKIREILYFLMENEFV 469
Query: 413 MLTM-NEAGHLSL-TSIAKAAVQAGLSHDVCLIIYSDLL-HNKLNFCLLNSLHMLFL--- 466
+T+ +E L L T +AK + + I+ D L + N L H++ L
Sbjct: 470 EVTLDDEIKPLPLGTRVAKLYIDP-----LTAKIFKDFLPYISGNPNPLGIFHVISLTPD 524
Query: 467 VIPLEYRIPSDGILLS-----RSKVY--DRYTKFHPQTLRVAEALGVTENLVALNVTGKL 519
+ P Y L S ++ +Y D Y + P R
Sbjct: 525 LTPFSYSKKELSKLESEYYEVKTYIYADDPYLSYDPYYER-------------------- 564
Query: 520 KDEKKALLCRFFH----ACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYR 575
+FF A L +N + ++ + + ++ L + + +
Sbjct: 565 ---------KFFRALKTALALNAWINEVSEGEIVEKFSVEPGDLYRLVETAEWLVYALKE 615
Query: 576 FCEELPELWCYKQLLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIAR 635
+ L + L L + Y L LM+LP V RAR L NAG+ ++E I
Sbjct: 616 IAKVLKAPEHVLKYLETLRVRVKYGIREELLPLMELPMVGRRRARALFNAGFRTVEDIKS 675
Query: 636 ADAKEMV 642
A +++
Sbjct: 676 AKPADLL 682
>gi|448475974|ref|ZP_21603329.1| ski2-like helicase [Halorubrum aidingense JCM 13560]
gi|445816192|gb|EMA66101.1| ski2-like helicase [Halorubrum aidingense JCM 13560]
Length = 816
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 119/434 (27%), Positives = 198/434 (45%), Gaps = 46/434 (10%)
Query: 28 GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENR--IDEIGLIVIDEFHMLNEPQRGPI 85
G Y L + I + T EK + SLI+ ID++ +V DE H++++ RGP
Sbjct: 103 GNYDSDGEWLATRDIIVATSEK----VDSLIRNGAPWIDDLTCVVSDEVHLVDDSHRGPT 158
Query: 86 LECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQ 145
LE ++K+ + +Q A+SAT+GN + ++ +++ + RP V +
Sbjct: 159 LEVTLAKLRKVNPGLQTVALSATVGNADVIADWLDAELVESDWRPIDLRTGVHFGNAI-- 216
Query: 146 SFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMV---------LIFCSSKIACSNLA 196
FD + E+ D G D LV L L+F +S+ + A
Sbjct: 217 DFDDGTKREVPVDR--------GEDQTARLVADALDTEEDGQGGSSLVFVNSRRNAESSA 268
Query: 197 LRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRL 256
RL + ++ + +L E ++ +D S +L + + G A+HHA L + R L
Sbjct: 269 RRLADVTASRLTDAERDDLRELAEEIRGVSDTDTSEDLADAVERGSAFHHAGLASDHRSL 328
Query: 257 IEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRD------SYVGRDFISLNMYKQMVGRA 310
+E+A+ ++ I T TLAAGVN PA+RVI+RD + G + + QM GRA
Sbjct: 329 VEDAFRDRLIKCISATPTLAAGVNTPARRVIVRDWRRYDGEFGGMKPLDVLEVHQMCGRA 388
Query: 311 GRTGLQESGESIMLCK--TMQDFLRFSSMMNAGPEPISSHMDP-PTLVDLILEVVAANLC 367
GR GL GE+++L +D L F + A EP+ S + P L +L VA+
Sbjct: 389 GRPGLDPYGEAVLLANDADTKDEL-FERYVWAEAEPVRSKLAAEPALRTHVLATVASGFA 447
Query: 368 SSLEDVKTLIKHTLFYQLKSPEDQQTFLETTLSEIVASLLASKGTMLTMNEAGHLSLTSI 427
S+ + + + +TL+ + D + L +++ V LA G + + G SLT+
Sbjct: 448 STRNGLLSFLDNTLY---ATQTDDEGRL-AAVTDTVLDYLAVNGFVDRDRDGGTESLTAT 503
Query: 428 AKAAVQAGLSHDVC 441
G+ H V
Sbjct: 504 -------GIGHTVS 510
>gi|385772277|ref|YP_005644843.1| DEAD/DEAH box helicase [Sulfolobus islandicus HVE10/4]
gi|385774991|ref|YP_005647559.1| DEAD/DEAH box helicase [Sulfolobus islandicus REY15A]
gi|323473739|gb|ADX84345.1| DEAD/DEAH box helicase domain protein [Sulfolobus islandicus
REY15A]
gi|323476391|gb|ADX81629.1| DEAD/DEAH box helicase domain protein [Sulfolobus islandicus
HVE10/4]
Length = 715
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 118/362 (32%), Positives = 173/362 (47%), Gaps = 31/362 (8%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+ +EKY + K E F + A G Y L I I T EK L +
Sbjct: 87 LTNEKYLTF-KDWESIGF---KVAMTSGDYDTDDAWLKNYDIIITTYEKLDSLWRH--RP 140
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIE 120
+ ++E V+DE H LN+P+RGP++E V + K + A+SATI N ++ ++
Sbjct: 141 DWLNEANYFVLDELHYLNDPERGPVVESVTIRA----KRRNLLALSATISNYKQIAKWLG 196
Query: 121 GITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAV----LHLV 176
N RP E V +R K T ++ DN + G DA+ L +
Sbjct: 197 AEPVATNWRPVPLMEGVMYPER-----KKKEYTILFRDNTTRKVHGD--DAIIAYTLDSL 249
Query: 177 QGNLMVLIFCSSKIACSNLALRL-QFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLE 235
N VL+F +S+ + AL++ + F E E + ++ + EE L+
Sbjct: 250 SKNGQVLVFRNSRKMAESTALKIANYMNFVSLDEKAISEILNQLDDI-EEGGSDEKELLK 308
Query: 236 ECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSY--- 292
I GVAYHHA L+ R +IEE++ +++I T TLAAGVNLPA+ VII D Y
Sbjct: 309 SLISKGVAYHHAGLSKALRDIIEESFRKRKIKVIVATPTLAAGVNLPARTVIIGDIYRFN 368
Query: 293 ---VG-RDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLR-FSSMMNAGPEPISS 347
VG D I + YKQM GRAGR G + GESI++ + +D R F + + EPI S
Sbjct: 369 RKIVGYYDEIPVMEYKQMSGRAGRPGFDQIGESIIVVRDKEDVDRVFKKYILSDVEPIES 428
Query: 348 HM 349
+
Sbjct: 429 KL 430
>gi|375082786|ref|ZP_09729832.1| ski2-like helicase [Thermococcus litoralis DSM 5473]
gi|374742483|gb|EHR78875.1| ski2-like helicase [Thermococcus litoralis DSM 5473]
Length = 718
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 182/721 (25%), Positives = 296/721 (41%), Gaps = 135/721 (18%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVK-----GQYPPTKRQLNKKSIYICTIEKGSKLIG 55
+ EKY+ EFKF+ E G++ G Y + L + I I T EK L+
Sbjct: 83 LAEEKYK-------EFKFW--EKLGIRIAVTTGDYDSAEEWLGRYDIIIATSEKFDSLLR 133
Query: 56 SLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINAL 115
+ I ++ LI+ DE H+L RG LE +++ +L+ QI +SATIGN L
Sbjct: 134 H--KSPWIKDVKLIIADEVHLLGSYDRGATLEMILA---HLRDKAQILGLSATIGNAEEL 188
Query: 116 STFIEGITYVENSRPTKHSEYVTVDKRVF---QSFDGKSLTEIYADNLDYSLTGSGPDAV 172
+ ++ V RP V++ + VF Q F E + D V
Sbjct: 189 AEWLNAELVVSEWRP------VSLKRGVFHHGQLFWEDGSIEKFPSQWD--------SLV 234
Query: 173 LHLVQGNLMVLIFCSSKIACSNLALRL--QFDRFPGTKEYKKQEKEDLIEALKEENDGKL 230
+ ++ + VL+F +++ + AL L + RF K E+ L + E
Sbjct: 235 IDALKKDKQVLVFVNTRRSAEKEALLLGGKVQRF-----LSKPEERRLKQIADELESTPT 289
Query: 231 STNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRD 290
+ L+E + GVA+HHA L ER ++EEA+ G +++I T TL+AGVNLPA RVIIRD
Sbjct: 290 NEKLKEALKKGVAFHHAGLGREERSIVEEAFREGLIKVITATPTLSAGVNLPAYRVIIRD 349
Query: 291 ----SYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPIS 346
S G I + +QM+GRAGR + G++I++ KT + + PE +
Sbjct: 350 TKRYSNFGWSDIPVLEIQQMMGRAGRPKYDKEGQAIIIAKTEKPEDLMKRYIFGKPENLF 409
Query: 347 SHM-DPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQLKSPEDQQTFLETTLSEIVAS 405
S + + + IL ++ + ++ ++ T +Y Q+ LE
Sbjct: 410 SMLSNEASFRSQILALITNFGVKNFRELIEFLEKTFYYH------QRKNLEAL------- 456
Query: 406 LLASKGTMLTMNEAGHLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLF 465
G + D+ LL N+ LN M
Sbjct: 457 ----------------------------EGKAKDIVYF----LLENEFIDIDLNDQFM-- 482
Query: 466 LVIPLEYRIPSDGIL---LSRSKVYDRYTKF--HPQTLRVAEALGVTENLVALNVTGKLK 520
PL + I + + L+ K D + K +P L V L T ++ +L + + K
Sbjct: 483 ---PLPFGIRTSQLYLDPLTAKKFKDAFEKLETNPNPLGVFHLLASTPDMASLRI--RRK 537
Query: 521 DEKKALLCRFFHACILYDVLNFDNHQKVAKMYG-IQNSHL----------QNFLNVTSYF 569
+++ L + LY + + K K G ++ + L L
Sbjct: 538 EQEDILDYAYEMESYLYQNIPYWEDYKFEKFLGEVKTAKLLLDWINEVPEARILETYDID 597
Query: 570 ASKVYRFCE-------ELPELW----CYKQLLTDLPQ---TLMYCRAPNLRALMDLPGVK 615
+YR E L EL+ K++L L Q + Y L L LP +
Sbjct: 598 TGDLYRILELADWLMYSLIELYKLSSPKKEILEFLKQLHLRVKYGVREELLELTSLPMIG 657
Query: 616 IGRARQLLNAGYSSLELIARADAKEMVAKIRHLPLRSARNLISAAKLHFITKMDKVEAMK 675
RAR L NAG+ S+E I +A E++ K+ + + ++ HF ++ KV+A K
Sbjct: 658 RKRARALYNAGFKSIEDIVKAKPSELL-KVEGIGV----GILEKLYQHFGVELPKVKAKK 712
Query: 676 N 676
Sbjct: 713 K 713
>gi|227826660|ref|YP_002828439.1| DEAD/DEAH box helicase [Sulfolobus islandicus M.14.25]
gi|229583824|ref|YP_002842325.1| DEAD/DEAH box helicase [Sulfolobus islandicus M.16.27]
gi|227458455|gb|ACP37141.1| DEAD/DEAH box helicase domain protein [Sulfolobus islandicus
M.14.25]
gi|228018873|gb|ACP54280.1| DEAD/DEAH box helicase domain protein [Sulfolobus islandicus
M.16.27]
Length = 715
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 118/362 (32%), Positives = 173/362 (47%), Gaps = 31/362 (8%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+ +EKY + K E F + A G Y L I I T EK L +
Sbjct: 87 LTNEKYLTF-KDWESIGF---KVAMTSGDYDTDDAWLKNYDIIITTYEKLDSLWRH--RP 140
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIE 120
+ ++E V+DE H LN+P+RGP++E V + K + A+SATI N ++ ++
Sbjct: 141 DWLNEANYFVLDELHYLNDPERGPVVESVTIRA----KRRNLLALSATISNYKQIAKWLG 196
Query: 121 GITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAV----LHLV 176
N RP E V +R K T ++ DN + G DA+ L +
Sbjct: 197 AEPVATNWRPVPLMEGVMYPER-----KKKEYTILFRDNTTKKVHGD--DAIIAYTLDSL 249
Query: 177 QGNLMVLIFCSSKIACSNLALRL-QFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLE 235
N VL+F +S+ + AL++ + F E E + ++ + EE L+
Sbjct: 250 TKNGQVLVFRNSRKMAESTALKIANYMNFVSLDEKAISEILNQLDDI-EEGGSDEKELLK 308
Query: 236 ECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSY--- 292
I GVAYHHA L+ R +IEE++ +++I T TLAAGVNLPA+ VII D Y
Sbjct: 309 SLISKGVAYHHAGLSKALRDIIEESFRKRKIKVIVATPTLAAGVNLPARTVIIGDIYRFN 368
Query: 293 ---VG-RDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLR-FSSMMNAGPEPISS 347
VG D I + YKQM GRAGR G + GESI++ + +D R F + + EPI S
Sbjct: 369 RKIVGYYDEIPVMEYKQMSGRAGRPGFDQIGESIIVVRDKEDVDRVFKKYILSDVEPIES 428
Query: 348 HM 349
+
Sbjct: 429 KL 430
>gi|134045737|ref|YP_001097223.1| DEAD/DEAH box helicase domain-containing protein [Methanococcus
maripaludis C5]
gi|132663362|gb|ABO35008.1| DEAD/DEAH box helicase domain protein [Methanococcus maripaludis
C5]
Length = 747
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 117/392 (29%), Positives = 197/392 (50%), Gaps = 38/392 (9%)
Query: 10 AKAAEEFKFYLEEYA--GVK-----GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQEN- 61
A A E+F + E+Y G+K G + TK L+K I I T EK + SL++ N
Sbjct: 76 ALANEKFDEFREKYEKYGIKVGLSIGDFD-TKENLSKFHIIITTSEK----LDSLMRHNV 130
Query: 62 -RIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIE 120
I+++ L VIDE H++ + +RG LE +++K+ L + QI +SATIGN LS ++
Sbjct: 131 EWINDVSLAVIDEIHLIGDNERGGTLEVILTKLKNL--NAQIVGLSATIGNPEELSNWLN 188
Query: 121 GITYVENSRPTKHSEYVTVDKRV-FQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGN 179
V+ RP + + + + + F K + ++ +NL D ++ V+
Sbjct: 189 AKLIVDGWRPVELKKGIYFENELEFLKNPAKKIKQVSRNNL--------TDLIVDSVEEK 240
Query: 180 LMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEK--EDLIEALKEENDGKLST--NLE 235
LIFC+SK A + ++ E + K E+++ L D + T L
Sbjct: 241 GSCLIFCNSKRNAVGEAKKHNLAKYLTRTEQHELNKLSEEILSIL----DRPVETCKALS 296
Query: 236 ECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRD----S 291
+CI GVA+HHA LT R+++E+ + +++ICCT TL+AG+NLP +R I+RD S
Sbjct: 297 KCIQNGVAFHHAGLTYKHRKIVEDGFRNRLIKVICCTPTLSAGLNLPCRRAIVRDIKRYS 356
Query: 292 YVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDP 351
G I +Q +GRAGR GL GE I+ K +D + ++ E I S +
Sbjct: 357 QNGLVDIPRMEIQQCIGRAGRPGLDPYGEGIIYIKNERDAEKAYEILTGSVENIYSKLAN 416
Query: 352 PTLVDL-ILEVVAANLCSSLEDVKTLIKHTLF 382
++ + IL +++ +++ +K+T +
Sbjct: 417 QKVLRIHILGLISTGEIKDGQNLVNFMKNTFY 448
>gi|448549870|ref|ZP_21628475.1| ATP-dependent DNA helicase Hel308b [Haloferax sp. ATCC BAA-645]
gi|448555018|ref|ZP_21631058.1| ATP-dependent DNA helicase Hel308b [Haloferax sp. ATCC BAA-644]
gi|445712918|gb|ELZ64699.1| ATP-dependent DNA helicase Hel308b [Haloferax sp. ATCC BAA-645]
gi|445717763|gb|ELZ69466.1| ATP-dependent DNA helicase Hel308b [Haloferax sp. ATCC BAA-644]
Length = 639
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 122/423 (28%), Positives = 191/423 (45%), Gaps = 55/423 (13%)
Query: 28 GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENR--IDEIGLIVIDEFHMLNEPQRGPI 85
G + + +L I + T EK + S I+ +D + +V+DE H+L P RGP
Sbjct: 97 GDFDAAEEELGDHDIVVATSEK----VDSAIRNGAPWVDRLACVVVDEVHLLGAPGRGPT 152
Query: 86 LECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQ 145
LE +S + +Q+ A+SAT+ N A++ +++ RP V D+ V
Sbjct: 153 LEVTLSTLQRRVPDLQLVALSATVDNPEAIADWLDAELVESTWRPVSLRTGVYADETV-- 210
Query: 146 SFDGKSLTEIYADNLDYSLTGSGP------DAVLHLVQGNL----MVLIFCSSKIACSNL 195
FD + +LD + +GP +A + LV+ + L F S+ L
Sbjct: 211 EFDDGT-------DLDVVVPPTGPNDDEATEATVALVEDAVETGGQCLAFVRSRREAEAL 263
Query: 196 ALRLQFDRFPGTKEYKKQEKEDLIEALKEEND--GKLSTN--LEECILYGVAYHHADLTA 251
A RL E+ AL +E D G +T L C GV +HHA L +
Sbjct: 264 ADRL------------ADEELSPAPALGDELDELGGTATGRQLSACARTGVGFHHAGLRS 311
Query: 252 GERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS--YVGR--DFISLNMYKQMV 307
R +E A+ L +IC T TLAAGVN+PA+RV+IRD Y G ++I + QM
Sbjct: 312 AHRVAVENAFRDRRLAVICATPTLAAGVNVPARRVVIRDQKRYTGDAMEWIPVLDVHQMC 371
Query: 308 GRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHM-DPPTLVDLILEVVAANL 366
GRAGR L GE++++ + A E + S DP L +L VVA+
Sbjct: 372 GRAGRPHLDPFGEAVLVGDADTKAELVDRYVTADAEAVDSQFADPEALRTHVLSVVASGF 431
Query: 367 CSSLEDVKTLIKHTLFYQLKSPEDQQTFLETTLSEIVASLLASKGTMLTMNEAGH-LSLT 425
SL+ V + T +Y ++P L+++VA +++ M ++ G LS T
Sbjct: 432 ADSLDGVADVFSAT-YYAHQNP-------NVDLADLVAEVVSDLEAMELLDATGETLSAT 483
Query: 426 SIA 428
++
Sbjct: 484 TLG 486
>gi|448625152|ref|ZP_21670919.1| ATP-dependent DNA helicase Hel308b [Haloferax denitrificans ATCC
35960]
gi|445748914|gb|EMA00360.1| ATP-dependent DNA helicase Hel308b [Haloferax denitrificans ATCC
35960]
Length = 639
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 123/416 (29%), Positives = 185/416 (44%), Gaps = 41/416 (9%)
Query: 28 GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENR--IDEIGLIVIDEFHMLNEPQRGPI 85
G + + +L I + T EK + S I+ +D + +V+DE H+L P RGP
Sbjct: 97 GDFDAAEEELGDHDIVVATSEK----VDSAIRNGAPWVDRLACVVVDEVHLLGAPGRGPT 152
Query: 86 LECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRV-F 144
LE +S + +Q+ A+SAT+ N A++ +++ RP V D+ V F
Sbjct: 153 LEVTLSTLQRRVPDLQLVALSATVDNPEAIADWLDAELVESTWRPVSLRTGVYADETVEF 212
Query: 145 QSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRLQFDRF 204
+ D T + V V+ L F S+ LA RL
Sbjct: 213 DDDTDLDVVVPPTGPNDDEATEATVALVEDAVETGGQCLAFVRSRREAEALADRLA---- 268
Query: 205 PGTKEYKKQEKEDL--IEALKEEND--GKLSTN--LEECILYGVAYHHADLTAGERRLIE 258
EDL AL +E D G +T L EC GV +HHA L + R +E
Sbjct: 269 ----------DEDLSPAPALGDELDELGGTATGRQLSECARTGVGFHHAGLRSAHRVAVE 318
Query: 259 EAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS--YVGR--DFISLNMYKQMVGRAGRTG 314
A+ L +IC T TLAAGVN+PA+RV+IRD Y G ++I + QM GRAGR
Sbjct: 319 NAFRDRRLAVICATPTLAAGVNVPARRVVIRDQKRYTGDAMEWIPVLDVHQMCGRAGRPH 378
Query: 315 LQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHM-DPPTLVDLILEVVAANLCSSLEDV 373
L GE++++ F + A E + S DP L +L VVA+ SL+ V
Sbjct: 379 LDPFGEAVLVGDADTKAELFDRYVTADAEAVDSQFADPEALRTHVLSVVASGFADSLDGV 438
Query: 374 KTLIKHTLFYQLKSPEDQQTFLETTLSEIVASLLASKGTMLTMNEAGH-LSLTSIA 428
+ T +Y + P + L+ +VA +++ TM ++ G LS T++
Sbjct: 439 ADVFSAT-YYAHQHP-------DVDLAALVADVVSELETMELLDVTGETLSATTLG 486
>gi|448455673|ref|ZP_21594692.1| DEAD/DEAH box helicase [Halorubrum lipolyticum DSM 21995]
gi|445813341|gb|EMA63320.1| DEAD/DEAH box helicase [Halorubrum lipolyticum DSM 21995]
Length = 659
Score = 141 bits (355), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 108/379 (28%), Positives = 170/379 (44%), Gaps = 31/379 (8%)
Query: 28 GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENR--IDEIGLIVIDEFHMLNEPQRGPI 85
G + + L + + T EK + S I+ +DE+ + +DE H+L P+RGP
Sbjct: 97 GDFDASGEALAGNDVVVATSEK----VDSAIRNGASWVDELACVAVDEVHLLGAPRRGPT 152
Query: 86 LECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQ 145
LE ++ + +Q+ A+SAT+ N A++ +++ RP V V V
Sbjct: 153 LEVTLATLRRRNPELQVVALSATVDNPEAIAEWLDAALVESEWRPVDLRTGVAVGGNV-- 210
Query: 146 SFDGKSLT--EIYADNLD-----------YSLTGSGPDAVLHLVQGNLMVLIFCSSKIAC 192
+FD + T E+ D D T V V L F S+
Sbjct: 211 TFDDGTTTTVEVGGDADDGESDGNGDDDPPDDTEVTAALVADAVDRGGQCLAFVRSRTEA 270
Query: 193 SNLALRLQFDRFPGTKEYKKQEKEDLIEALKEEN-DGKLST-NLEECILYGVAYHHADLT 250
LA RL D G E E + + DG + L +C+ GVA+HHA L
Sbjct: 271 VALAERLADD---GLAERSGTESAAATAGDEAADVDGTATGRQLADCLRAGVAFHHAGLR 327
Query: 251 AGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS--YVGR--DFISLNMYKQM 306
AG R ++EEA+ L IC T TLAAGVN+PA+RV++RD Y G +++ QM
Sbjct: 328 AGHRAVVEEAFRDRGLACICATPTLAAGVNVPARRVVVRDQKRYAGSAMEWLPTLEVHQM 387
Query: 307 VGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHM-DPPTLVDLILEVVAAN 365
GRAGR GL GE++++ + ++ PE + S + DP +L +L VA
Sbjct: 388 CGRAGRPGLDPYGEAVLVGNRDTEAELVERYVDGEPEAVESTLADPASLRTHVLSAVATG 447
Query: 366 LCSSLEDVKTLIKHTLFYQ 384
+ ++ + + T + +
Sbjct: 448 FAETEAEILDVFEGTFYAR 466
>gi|150402065|ref|YP_001329359.1| DEAD/DEAH box helicase domain-containing protein [Methanococcus
maripaludis C7]
gi|150033095|gb|ABR65208.1| DEAD/DEAH box helicase domain protein [Methanococcus maripaludis
C7]
Length = 746
Score = 141 bits (355), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 116/394 (29%), Positives = 197/394 (50%), Gaps = 35/394 (8%)
Query: 10 AKAAEEFKFYLEEYA--GVK-----GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQEN- 61
A A E+F + E+Y G+K G + TK L+K I I T EK + SL++ N
Sbjct: 76 ALANEKFDEFREKYEKYGIKVGLSIGDFD-TKEDLSKFHIIITTSEK----LDSLMRHNV 130
Query: 62 -RIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIE 120
I+ + L +IDE H++ + +RG LE +++K+ L + QI +SATIGN LS ++
Sbjct: 131 EWINTVSLAIIDEIHLIGDNERGGTLEVILTKLKNL--NAQIVGLSATIGNPEELSNWLN 188
Query: 121 GITYVENSRPTKHSEYVTVDKRV-FQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGN 179
V+ RP + + + + + F K + ++ +NL D ++ V+
Sbjct: 189 AKLIVDEWRPVELKKGIYFENELEFLKNPAKKIKKLSKNNL--------TDLIVDSVEEK 240
Query: 180 LMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEK--EDLIEALKEENDGKLSTNLEEC 237
LIFC+SK A + R+ E + K ED++ L + + L EC
Sbjct: 241 GSCLIFCNSKRNAVGEAKKHNLTRYLTKTEQHELNKLSEDILSIL--DTPTETCRALSEC 298
Query: 238 ILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS--YVGR 295
I GV++HHA LT R+++E+ + +++ICCT TL+AG+NLP +R I+RD+ Y
Sbjct: 299 IKKGVSFHHAGLTYQHRKIVEDGFRNRLIKVICCTPTLSAGLNLPCRRAIVRDTKRYSQN 358
Query: 296 DFISLNMY--KQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPT 353
+ + +Q +GRAGR GL GE I+ K ++ + ++ E I S +
Sbjct: 359 GLVDIPRMEIQQCIGRAGRPGLDPYGEGIIYIKNEKEAEKAYEILIGNVENIYSKLANQK 418
Query: 354 LVDL-ILEVVAANLCSSLEDVKTLIKHTLF-YQL 385
++ + IL +++ E + +K+T + YQ
Sbjct: 419 VLRIHILGLISTGEIKDGESLVNFMKNTFYAYQF 452
>gi|448571875|ref|ZP_21640049.1| ATP-dependent DNA helicase Hel308b [Haloferax lucentense DSM 14919]
gi|448596783|ref|ZP_21653921.1| ATP-dependent DNA helicase Hel308b [Haloferax alexandrinus JCM
10717]
gi|445721842|gb|ELZ73508.1| ATP-dependent DNA helicase Hel308b [Haloferax lucentense DSM 14919]
gi|445740664|gb|ELZ92169.1| ATP-dependent DNA helicase Hel308b [Haloferax alexandrinus JCM
10717]
Length = 639
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 123/423 (29%), Positives = 190/423 (44%), Gaps = 55/423 (13%)
Query: 28 GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENR--IDEIGLIVIDEFHMLNEPQRGPI 85
G + + +L I + T EK + S I+ +D + +V+DE H+L P RGP
Sbjct: 97 GDFDAAEEELGDHDIVVATSEK----VDSAIRNGAPWVDRLACVVVDEVHLLGAPGRGPT 152
Query: 86 LECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQ 145
LE +S + +Q+ A+SAT+ N A++ +++ RP V D+ V
Sbjct: 153 LEVTLSTLQRRVPDLQLVALSATVDNPEAIADWLDAELVESAWRPVSLRTGVYADETV-- 210
Query: 146 SFDGKSLTEIYADNLDYSLTGSGP------DAVLHLVQGNL----MVLIFCSSKIACSNL 195
FD + +LD + +GP +A + LV+ + L F S+ L
Sbjct: 211 EFDDGT-------DLDVVVPPTGPNDDEATEATVALVEDAVETGGQCLAFVRSRREAEAL 263
Query: 196 ALRLQFDRFPGTKEYKKQEKEDLIEALKEEND--GKLSTN--LEECILYGVAYHHADLTA 251
A RL E+ AL +E D G +T L C GV +HHA L +
Sbjct: 264 ADRL------------ADEELSPAPALGDELDELGGTATGRQLSACARTGVGFHHAGLRS 311
Query: 252 GERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS--YVGR--DFISLNMYKQMV 307
R +E A+ L +IC T TLAAGVN+PA+RV+IRD Y G ++I + QM
Sbjct: 312 AHRVAVENAFRDRRLAVICATPTLAAGVNVPARRVVIRDQKRYTGDAMEWIPVLDVHQMC 371
Query: 308 GRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPP-TLVDLILEVVAANL 366
GRAGR L GE++++ + A E + S D P L +L VVA+
Sbjct: 372 GRAGRPHLDPFGEAVLVGDADTKAELVDRYVTADAEAVDSQFDDPEALRTHVLSVVASGF 431
Query: 367 CSSLEDVKTLIKHTLFYQLKSPEDQQTFLETTLSEIVASLLASKGTMLTMNEA-GHLSLT 425
SL+ V + T +Y + P L+E+VA +++ M ++ G LS T
Sbjct: 432 ADSLDGVADVFSAT-YYAHQHP-------SVDLAELVADVVSELEAMELLDATDGTLSAT 483
Query: 426 SIA 428
++
Sbjct: 484 TLG 486
>gi|229583283|ref|YP_002841682.1| DEAD/DEAH box helicase [Sulfolobus islandicus Y.N.15.51]
gi|228013999|gb|ACP49760.1| DEAD/DEAH box helicase domain protein [Sulfolobus islandicus
Y.N.15.51]
Length = 715
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 117/362 (32%), Positives = 173/362 (47%), Gaps = 31/362 (8%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+ +EKY + K E F + A G Y L I I T EK L +
Sbjct: 87 LTNEKYLTF-KDWESIGF---KVAMTSGDYDTDDAWLKNYDIIITTYEKLDSLWRH--RP 140
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIE 120
+ ++E V+DE H LN+P+RGP++E V + K + A+SATI N ++ ++
Sbjct: 141 DWLNEANYFVLDELHYLNDPERGPVVESVTIRA----KRRNLLALSATISNYKQIAKWLG 196
Query: 121 GITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAV----LHLV 176
+ N RP E V +R K T ++ DN + G DA+ L +
Sbjct: 197 AESVATNWRPVPLMEGVMYPER-----KKKEYTILFRDNTARKVHGD--DAIIAYTLDSL 249
Query: 177 QGNLMVLIFCSSKIACSNLALRL-QFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLE 235
N VL+F +S+ + AL++ + F E E ++ + EE L+
Sbjct: 250 SKNGQVLVFRNSRKMAESTALKIANYMNFVSLDEKAISEILKQLDDI-EEGGSDEKELLK 308
Query: 236 ECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSY--- 292
I GVAYHHA L+ R +IEE++ +++I T TLAAG+NLPA+ VII D Y
Sbjct: 309 SLISKGVAYHHAGLSKALRDIIEESFRKRKIKVIVATPTLAAGINLPARTVIIGDIYRFN 368
Query: 293 ---VG-RDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLR-FSSMMNAGPEPISS 347
VG D I + YKQM GRAGR G + GESI++ + +D R F + + EPI S
Sbjct: 369 RKIVGYYDEIPVMEYKQMSGRAGRPGFDQIGESIIVVRDKEDVDRVFKKYILSDVEPIES 428
Query: 348 HM 349
+
Sbjct: 429 KL 430
>gi|352681751|ref|YP_004892275.1| DNA helicase [Thermoproteus tenax Kra 1]
gi|350274550|emb|CCC81195.1| DNA helicase [Thermoproteus tenax Kra 1]
Length = 711
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 119/392 (30%), Positives = 188/392 (47%), Gaps = 37/392 (9%)
Query: 16 FKFY--LEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDE 73
F +Y L + A G+Y L+K + + T EK L+ + ++ +G +++DE
Sbjct: 87 FSYYGDLVDVAVSTGEYDSEDAWLHKYDVVVTTYEKLDSLLRH--RPRWLNRVGALILDE 144
Query: 74 FHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVENSRPTKH 133
H + +P+RGP+LE +++K YL Q+ AMSATIGN L+ ++ + RP
Sbjct: 145 VHYVGDPKRGPVLESIIAKAKYLGLRAQLVAMSATIGNPEVLAHWLGAKLIKSSWRPVPL 204
Query: 134 SEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACS 193
E V D + + DG + + + +L A+ L G L+F +S+ A
Sbjct: 205 KEGVYFDG-LIRYADGSTRRVPRFHDPEVAL------ALDALADGG-QALVFVNSRAATV 256
Query: 194 NLALRLQFDRFPGTKEYKKQEKEDLIEA-----LKEENDGK-----LSTNLEECILYGVA 243
N A R+ E + LI+A L E + + + L + GVA
Sbjct: 257 NTAKRIA--------EAIASSESKLIDASSAAKLAAEIESTSASRIIGSELASTVARGVA 308
Query: 244 YHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIR-----DSYVGRDFI 298
+H+A L RRL+E+ + +G ++++ T+TLAAGVNLPA+RVII D VG + I
Sbjct: 309 FHNAGLELELRRLVEDGFRSGVVKVVVSTTTLAAGVNLPARRVIITEVKRYDPLVGNEEI 368
Query: 299 SLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGP-EPISSHM-DPPTLVD 356
+ Y+QM GRAGR GL GE+I + ++ GP E + S + L
Sbjct: 369 PVMEYRQMAGRAGRPGLDPYGEAIAIASNGREAEYIEEHYIRGPVESVRSQLFSEANLRG 428
Query: 357 LILEVVAANLCSSLEDVKTLIKHTLFYQLKSP 388
+L VV + SSL++V + TL Y P
Sbjct: 429 HLLGVVGSRYASSLDEVLDYLSSTLAYSQLGP 460
>gi|433422792|ref|ZP_20406079.1| ATP-dependent DNA helicase, partial [Haloferax sp. BAB2207]
gi|432198528|gb|ELK54802.1| ATP-dependent DNA helicase, partial [Haloferax sp. BAB2207]
Length = 606
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 123/423 (29%), Positives = 190/423 (44%), Gaps = 55/423 (13%)
Query: 28 GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENR--IDEIGLIVIDEFHMLNEPQRGPI 85
G + + +L I + T EK + S I+ +D + +V+DE H+L P RGP
Sbjct: 64 GDFDAAEEELGDHDIVVATSEK----VDSAIRNGAPWVDRLACVVVDEVHLLGAPGRGPT 119
Query: 86 LECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQ 145
LE +S + +Q+ A+SAT+ N A++ +++ RP V D+ V
Sbjct: 120 LEVTLSTLQRRVPDLQLVALSATVDNPEAIADWLDAELVESAWRPVSLRTGVYADETV-- 177
Query: 146 SFDGKSLTEIYADNLDYSLTGSGP------DAVLHLVQGNL----MVLIFCSSKIACSNL 195
FD + +LD + +GP +A + LV+ + L F S+ L
Sbjct: 178 EFDDGT-------DLDVVVPPTGPNDDEATEATVALVEDAVETGGQCLAFVRSRREAEAL 230
Query: 196 ALRLQFDRFPGTKEYKKQEKEDLIEALKEEND--GKLSTN--LEECILYGVAYHHADLTA 251
A RL E+ AL +E D G +T L C GV +HHA L +
Sbjct: 231 ADRL------------ADEELSPAPALGDELDELGGTATGRQLSACARTGVGFHHAGLRS 278
Query: 252 GERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS--YVGR--DFISLNMYKQMV 307
R +E A+ L +IC T TLAAGVN+PA+RV+IRD Y G ++I + QM
Sbjct: 279 AHRVAVENAFRDRRLAVICATPTLAAGVNVPARRVVIRDQKRYTGDAMEWIPVLDVHQMC 338
Query: 308 GRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPP-TLVDLILEVVAANL 366
GRAGR L GE++++ + A E + S D P L +L VVA+
Sbjct: 339 GRAGRPHLDPFGEAVLVGDADTKAELVDRYVTADAEAVDSQFDDPEALRTHVLSVVASGF 398
Query: 367 CSSLEDVKTLIKHTLFYQLKSPEDQQTFLETTLSEIVASLLASKGTMLTMNEA-GHLSLT 425
SL+ V + T +Y + P L+E+VA +++ M ++ G LS T
Sbjct: 399 ADSLDGVADVFSAT-YYAHQHP-------SVDLAELVADVVSELEAMELLDATDGTLSAT 450
Query: 426 SIA 428
++
Sbjct: 451 TLG 453
>gi|227829301|ref|YP_002831080.1| DEAD/DEAH box helicase [Sulfolobus islandicus L.S.2.15]
gi|284996658|ref|YP_003418425.1| DEAD/DEAH box helicase [Sulfolobus islandicus L.D.8.5]
gi|227455748|gb|ACP34435.1| DEAD/DEAH box helicase domain protein [Sulfolobus islandicus
L.S.2.15]
gi|284444553|gb|ADB86055.1| DEAD/DEAH box helicase domain protein [Sulfolobus islandicus
L.D.8.5]
Length = 715
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 118/362 (32%), Positives = 172/362 (47%), Gaps = 31/362 (8%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+ +EKY + K E F + A G Y L I I T EK L +
Sbjct: 87 LTNEKYLTF-KDWESIGF---KVAMTSGDYDTDDAWLKNYDIIITTYEKLDSLWRH--RP 140
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIE 120
+ ++E V+DE H LN+P+RGP++E V + K + A+SATI N ++ ++
Sbjct: 141 DWLNEANYFVLDELHYLNDPERGPVVESVTIRA----KRRNLLALSATISNYKQIAKWLG 196
Query: 121 GITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAV----LHLV 176
N RP E V +R K T ++ DN + G DA+ L +
Sbjct: 197 AEPVATNWRPVPLMEGVMYPER-----KKKEYTILFRDNTARKVHGD--DAIIAYTLDSL 249
Query: 177 QGNLMVLIFCSSKIACSNLALRL-QFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLE 235
N VL+F +S+ + AL++ + F E E ++ + EE L+
Sbjct: 250 SKNGQVLVFRNSRKMAESTALKIANYMNFVSLDEKAISEILKQLDDI-EEGGSDEKELLK 308
Query: 236 ECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSY--- 292
I GVAYHHA L+ R +IEE++ +++I T TLAAGVNLPA+ VII D Y
Sbjct: 309 SLISKGVAYHHAGLSKALRDIIEESFRKRKIKVIVATPTLAAGVNLPARTVIIGDIYRFN 368
Query: 293 ---VG-RDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLR-FSSMMNAGPEPISS 347
VG D I + YKQM GRAGR G + GESI++ + +D R F + + EPI S
Sbjct: 369 RKIVGYYDEIPVMEYKQMSGRAGRPGFDQIGESIIVVRDKEDVDRVFKKYILSDVEPIES 428
Query: 348 HM 349
+
Sbjct: 429 KL 430
>gi|15899206|ref|NP_343811.1| DNA helicase-like protein [Sulfolobus solfataricus P2]
gi|229578071|ref|YP_002836469.1| DEAD/DEAH box helicase [Sulfolobus islandicus Y.G.57.14]
gi|13815764|gb|AAK42601.1| DNA helicase related protein [Sulfolobus solfataricus P2]
gi|228008785|gb|ACP44547.1| DEAD/DEAH box helicase domain protein [Sulfolobus islandicus
Y.G.57.14]
Length = 715
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 118/362 (32%), Positives = 172/362 (47%), Gaps = 31/362 (8%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+ +EKY + K E F + A G Y L I I T EK L +
Sbjct: 87 LTNEKYLTF-KDWESIGF---KVAMTSGDYDTDDAWLKNYDIIITTYEKLDSLWRH--RP 140
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIE 120
+ ++E V+DE H LN+P+RGP++E V + K + A+SATI N ++ ++
Sbjct: 141 DWLNEANYFVLDELHYLNDPERGPVVESVTIRA----KRRNLLALSATISNYKQIAKWLG 196
Query: 121 GITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAV----LHLV 176
N RP E V +R K T ++ DN + G DA+ L +
Sbjct: 197 AEPVATNWRPVPLMEGVMYPER-----KKKEYTILFRDNTARKVHGD--DAIIAYTLDSL 249
Query: 177 QGNLMVLIFCSSKIACSNLALRL-QFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLE 235
N VL+F +S+ + AL++ + F E E ++ + EE L+
Sbjct: 250 SKNGQVLVFRNSRKMAESTALKIANYMNFVSLDEKAISEILKQLDDI-EEGGSDEKELLK 308
Query: 236 ECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSY--- 292
I GVAYHHA L+ R +IEE++ +++I T TLAAGVNLPA+ VII D Y
Sbjct: 309 SLISKGVAYHHAGLSKALRDIIEESFRKRKIKVIVATPTLAAGVNLPARTVIIGDIYRFN 368
Query: 293 ---VG-RDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLR-FSSMMNAGPEPISS 347
VG D I + YKQM GRAGR G + GESI++ + +D R F + + EPI S
Sbjct: 369 RKIVGYYDEIPVMEYKQMSGRAGRPGFDQIGESIIVVRDKEDVDRVFKKYILSDVEPIES 428
Query: 348 HM 349
+
Sbjct: 429 KL 430
>gi|448586495|ref|ZP_21648474.1| ATP-dependent DNA helicase Hel308b [Haloferax gibbonsii ATCC 33959]
gi|445724814|gb|ELZ76442.1| ATP-dependent DNA helicase Hel308b [Haloferax gibbonsii ATCC 33959]
Length = 639
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 121/411 (29%), Positives = 183/411 (44%), Gaps = 52/411 (12%)
Query: 28 GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENR--IDEIGLIVIDEFHMLNEPQRGPI 85
G + + L I + T EK + S I+ ++ + +V+DE H+L P RGP
Sbjct: 97 GDFDADEAALGDHDIVVATSEK----VDSAIRNGAPWVERLACVVVDEVHLLGAPGRGPT 152
Query: 86 LECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQ 145
LE ++ + +Q+ A+SAT+ N ++ +++ RP V D+ V
Sbjct: 153 LEVTLATLQRRVPDLQLVALSATVDNPEVIADWLDAALVESTWRPVSLRTGVYADETV-- 210
Query: 146 SFDGKSLTEIYADNLDYSLTGSGP------DAVLHLVQGNL----MVLIFCSSKIACSNL 195
FD + +LD + +GP +A + LV+ + L F S+ L
Sbjct: 211 EFDDGT-------DLDVVVPPTGPNDDEATEATVALVEDAVETGGQCLAFVRSRREAEAL 263
Query: 196 ALRLQFDRFPGTKEYKKQEKEDL--IEALKEEND--GKLSTN--LEECILYGVAYHHADL 249
A RL EDL AL +E D G +T L EC GV +HHA L
Sbjct: 264 ADRLA--------------DEDLSPAPALGDELDELGGTATGRQLSECARTGVGFHHAGL 309
Query: 250 TAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS--YVGRD--FISLNMYKQ 305
+ R +E A+ L +IC T TLAAGVN+PA+RV+IRD Y G +I + Q
Sbjct: 310 RSAHRVAVENAFRDRRLAVICATPTLAAGVNVPARRVVIRDQKRYTGDSMAWIPVLDVHQ 369
Query: 306 MVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPP-TLVDLILEVVAA 364
M GRAGR L GE++++ F + A E + S D P L +L VVA+
Sbjct: 370 MCGRAGRPHLDPFGEAVLVGDADTKAELFDRYVTADAEAVDSQFDDPEALRTHVLSVVAS 429
Query: 365 NLCSSLEDVKTLIKHTLFYQLKSPEDQQTFLETTLSEIVASLL--ASKGTM 413
SL+ V + T + D + +SE+ A L A++GT+
Sbjct: 430 GFADSLDGVADVFSATYYAHQNPSVDLVGLVADVVSELEAMELLDATEGTL 480
>gi|18202627|sp|Q97VY9.1|HELS_SULSO RecName: Full=Putative ski2-type helicase
Length = 708
Score = 140 bits (353), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 118/362 (32%), Positives = 172/362 (47%), Gaps = 31/362 (8%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+ +EKY + K E F + A G Y L I I T EK L +
Sbjct: 80 LTNEKYLTF-KDWESIGF---KVAMTSGDYDTDDAWLKNYDIIITTYEKLDSLWRH--RP 133
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIE 120
+ ++E V+DE H LN+P+RGP++E V + K + A+SATI N ++ ++
Sbjct: 134 DWLNEANYFVLDELHYLNDPERGPVVESVTIRA----KRRNLLALSATISNYKQIAKWLG 189
Query: 121 GITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAV----LHLV 176
N RP E V +R K T ++ DN + G DA+ L +
Sbjct: 190 AEPVATNWRPVPLMEGVMYPER-----KKKEYTILFRDNTARKVHGD--DAIIAYTLDSL 242
Query: 177 QGNLMVLIFCSSKIACSNLALRL-QFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLE 235
N VL+F +S+ + AL++ + F E E ++ + EE L+
Sbjct: 243 SKNGQVLVFRNSRKMAESTALKIANYMNFVSLDEKAISEILKQLDDI-EEGGSDEKELLK 301
Query: 236 ECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSY--- 292
I GVAYHHA L+ R +IEE++ +++I T TLAAGVNLPA+ VII D Y
Sbjct: 302 SLISKGVAYHHAGLSKALRDIIEESFRKRKIKVIVATPTLAAGVNLPARTVIIGDIYRFN 361
Query: 293 ---VG-RDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLR-FSSMMNAGPEPISS 347
VG D I + YKQM GRAGR G + GESI++ + +D R F + + EPI S
Sbjct: 362 RKIVGYYDEIPVMEYKQMSGRAGRPGFDQIGESIIVVRDKEDVDRVFKKYILSDVEPIES 421
Query: 348 HM 349
+
Sbjct: 422 KL 423
>gi|330834721|ref|YP_004409449.1| DEAD/DEAH box helicase domain-containing protein [Metallosphaera
cuprina Ar-4]
gi|329566860|gb|AEB94965.1| DEAD/DEAH box helicase domain-containing protein [Metallosphaera
cuprina Ar-4]
Length = 700
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 171/636 (26%), Positives = 271/636 (42%), Gaps = 106/636 (16%)
Query: 28 GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQEN--RIDEIGLIVIDEFHMLNEPQRGPI 85
G Y L+K + + T EK + SL + + E V+DE H +N+ +RGPI
Sbjct: 106 GDYDAEDAFLSKYDLVVTTYEK----LDSLWRHGPEWLLETDYFVLDELHYMNDGKRGPI 161
Query: 86 LECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTV-DKRVF 144
+E V + K +I A+SAT+ N A++ ++ N RP E + + D+++
Sbjct: 162 VESVAVRA----KRRKILALSATVSNGEAIAKWLNAELVNTNWRPVPLREGILINDRKIT 217
Query: 145 QSF-DGKSLTEIYADNLDYSLTGSGPDAVL----HLVQGNLMVLIFCSS---------KI 190
SF DG +LT L GS D +L +V+ VLIF SS K+
Sbjct: 218 LSFSDGTTLT----------LKGS--DGILSYTEKVVEEGGQVLIFRSSRKMAETTAKKV 265
Query: 191 ACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKE-ENDGKLSTN-LEECILYGVAYHHAD 248
A NL LR + E + L L+E E+ G N L E I GVA+HHA
Sbjct: 266 ASLNLKLR-------------RGEVDSLASRLEEVEDAGSEEKNTLLELIKKGVAFHHAG 312
Query: 249 LTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSY------VG-RDFISLN 301
L+ G R LIEE + +++I T TLAAGVNLPA+ VII D + +G ++ IS+
Sbjct: 313 LSKGLRDLIEEGFRKRIIKVITATPTLAAGVNLPARSVIIGDIHRFNRRILGFQEEISVM 372
Query: 302 MYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFS-SMMNAGPEPISSHMDPPTLVDLILE 360
YKQM GRAGR G GE++++ + ++ R + + + PEP+ S + + L
Sbjct: 373 EYKQMSGRAGRPGYDSEGEAVIVVRNRREAERIARKYIFSPPEPLESKLGNESAFYSFLL 432
Query: 361 VVAANLCSSLEDVKTLIKHTLFYQLKSPEDQQTFLETTLSEIVASLLASKGTMLTMNE-- 418
+ A SS E V+ L+ + FL+ ++E S L + L NE
Sbjct: 433 GLFAEKGSSEERVRNLV-------------YEAFLDRNVTE---SYLEQGFSWLKENEFL 476
Query: 419 AGHLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEYRIPSDG 478
LT + ++ II L ++ C + LHML + DG
Sbjct: 477 TNDYKLTVFGRRVADIYINPFSAKIIKDVLTSSQSEDCDIPYLHMLAMT--------PDG 528
Query: 479 ILLSRSKVYDR---YTKFHPQTLRVAEALGVTENLVALNVTGKLKDEKKALLCRFFHACI 535
+ + SK + Y P + + +DE L A I
Sbjct: 529 PIANVSKQEEDDLVYVSPCPTFMEEPDD----------------EDELYEYLSALKIALI 572
Query: 536 LYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELWCYKQLLTDLPQ 595
++D + + Y I + L++ + + Y+ + L +L + ++L L +
Sbjct: 573 VHDWVEETEEDTILSKYNIGSGDLRSIVETMDWLTYSGYQVAKAL-KLESHAEILHKLNR 631
Query: 596 TLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLE 631
+ L L+ +PG+ R R L G + E
Sbjct: 632 RVYDGVKEELLDLIRVPGIGRKRGRLLYQNGLTKPE 667
>gi|340624188|ref|YP_004742641.1| superfamily II helicase [Methanococcus maripaludis X1]
gi|339904456|gb|AEK19898.1| superfamily II helicase [Methanococcus maripaludis X1]
Length = 747
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 114/392 (29%), Positives = 195/392 (49%), Gaps = 31/392 (7%)
Query: 10 AKAAEEFKFYLEEYA--GVK-----GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENR 62
A A E+F + E+Y G+K G + TK L+K I I T EK L+ ++
Sbjct: 76 ALANEKFDEFKEKYEKYGIKVGLSIGDFD-TKENLSKFHIIITTSEKLDSLMRHEVE--W 132
Query: 63 IDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGI 122
I+++ L VIDE H++ + RG LE +++K+ L + QI +SATIGN LS ++
Sbjct: 133 INDVSLAVIDEIHLIGDNDRGGTLEVILTKLKNL--NAQIVGLSATIGNPEELSDWLNAK 190
Query: 123 TYVENSRPTKHSEYVTVDKRV-FQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLM 181
V+ RP + + + + + F K + ++ +N+ D ++ V+
Sbjct: 191 LIVDEWRPVELKKGIYFENELEFVKSPAKKIKQVSKNNI--------TDLIVDSVEEKGS 242
Query: 182 VLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEK--EDLIEALKEENDGKLSTNLEECIL 239
LIFC+SK A + ++ E + K E+++ L + + L ECI
Sbjct: 243 CLIFCNSKRNAVGEAKKHNLTKYLTRTEQHELNKLSEEILSIL--DTPTETCKALSECIK 300
Query: 240 YGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRD----SYVGR 295
G+A+HHA LT R+++E+ + +++ICCT TL+AG+NLP +R I+RD S G
Sbjct: 301 KGIAFHHAGLTYQHRKIVEDGFRNRLIKVICCTPTLSAGLNLPCRRAIVRDIKRYSQNGL 360
Query: 296 DFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLV 355
I +Q +GRAGR GL GE I+ K +D + ++ E I S + ++
Sbjct: 361 VDIPRMEIQQCIGRAGRPGLDPYGEGIIYIKNERDSEKAYEILTGSVENIYSKLANQKVL 420
Query: 356 DL-ILEVVAANLCSSLEDVKTLIKHTLF-YQL 385
+ IL +++ +++ +K+T + YQ
Sbjct: 421 RIHILGLISTGEIKDGQNLVNFMKNTFYAYQF 452
>gi|126458706|ref|YP_001054984.1| DEAD/DEAH box helicase [Pyrobaculum calidifontis JCM 11548]
gi|226740608|sp|A3MSA1.1|HELS_PYRCJ RecName: Full=Putative ski2-type helicase
gi|126248427|gb|ABO07518.1| DEAD/DEAH box helicase domain protein [Pyrobaculum calidifontis JCM
11548]
Length = 708
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 112/378 (29%), Positives = 187/378 (49%), Gaps = 52/378 (13%)
Query: 28 GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILE 87
G + R+L++ + + T EK L+ + N + +G++V+DE H L +P+RGP+LE
Sbjct: 101 GDFDSDDRRLHEFDVVVVTYEKLDSLLRH--RPNWLGLVGVVVVDEIHYLGDPRRGPVLE 158
Query: 88 CVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVENS-RPTKHSEYVTVDKRVFQS 146
+V+K+ +L Q +SAT+GN ++ ++ G VE+S RP E V V +
Sbjct: 159 SIVAKLRHLGLKTQFIGLSATVGNAGEVAAWL-GARLVESSWRPVPLREGVY-HGGVIRF 216
Query: 147 FDGKSLTEIYA-DNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRLQFDRFP 205
DG S+ + A + + +L + V G L+F +S+ + LA +
Sbjct: 217 SDG-SMQRVNAPGDAEVALA-------VDAVAGGGQALVFTNSRSSTVRLAKAVA----- 263
Query: 206 GTKEYKKQEKEDLI---------EALKEENDGKLSTNLEECILYGVAYHHADLTAGERRL 256
K E L+ E LK + + L + + GVA+H+A L RRL
Sbjct: 264 -----KAMEAAGLVPRGAKALAEEVLKASSSKIIGRELADLVARGVAFHNAGLELEVRRL 318
Query: 257 IEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIR-----DSYVGRDFISLNMYKQMVGRAG 311
+E+ + G L+++ T+TLAAGVNLPA+RV++ D +GR+ I + Y+QM GRAG
Sbjct: 319 VEDGFRRGLLKVVVSTTTLAAGVNLPARRVVVADYERFDPALGREEIPVLEYRQMAGRAG 378
Query: 312 RTGLQESGESIMLCKT-------MQDFLRFSSMMNAGPEPISSH-MDPPTLVDLILEVVA 363
R GL GE++++ ++ M+ ++R E + SH + P L +L V
Sbjct: 379 RPGLDPYGEAVLVARSKGEAEYLMERYVRGQV------EGVRSHILAEPNLRAHVLGAVG 432
Query: 364 ANLCSSLEDVKTLIKHTL 381
SL+D+ +TL
Sbjct: 433 GGYAKSLDDLVDFFSNTL 450
>gi|238618746|ref|YP_002913571.1| DEAD/DEAH box helicase [Sulfolobus islandicus M.16.4]
gi|238379815|gb|ACR40903.1| DEAD/DEAH box helicase domain protein [Sulfolobus islandicus
M.16.4]
Length = 715
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 116/362 (32%), Positives = 173/362 (47%), Gaps = 31/362 (8%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+ +EKY + K E F + A G Y L I I T EK L +
Sbjct: 87 LTNEKYLTF-KDWESIGF---KVAMTSGDYDTDDAWLKNYDIIITTYEKLDSLWRH--RP 140
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIE 120
+ ++E V+DE H LN+P+RGP++E V + K + A+SATI N ++ ++
Sbjct: 141 DWLNEANYFVLDELHYLNDPERGPVVESVTIRT----KRRNLLALSATISNYKQIAKWLG 196
Query: 121 GITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAV----LHLV 176
N RP E + ++ K T ++ DN + G DA+ L +
Sbjct: 197 AEPVATNWRPVPLMEGI-----MYPEKKKKEYTILFRDNTTRKVHGD--DAIIAYTLDSL 249
Query: 177 QGNLMVLIFCSSKIACSNLALRL-QFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLE 235
N VL+F +S+ + AL++ + F E E + ++ + EE L+
Sbjct: 250 TKNGQVLVFRNSRKMAESTALKIANYMNFVSLDEKAISEILNQLDDI-EEGGSDEKELLK 308
Query: 236 ECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSY--- 292
I GVAYHHA L+ R +IEE++ +++I T TLAAGVNLPA+ VII D Y
Sbjct: 309 SLISKGVAYHHAGLSKALRDIIEESFRKRKIKVIVATPTLAAGVNLPARTVIIGDIYRFN 368
Query: 293 ---VG-RDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLR-FSSMMNAGPEPISS 347
VG D I + YKQM GRAGR G + GESI++ + +D R F + + EPI S
Sbjct: 369 RKIVGYYDEIPVMEYKQMSGRAGRPGFDQIGESIIVVRDKEDVDRVFKKYILSDVEPIES 428
Query: 348 HM 349
+
Sbjct: 429 KL 430
>gi|45358453|ref|NP_988010.1| superfamily II helicase [Methanococcus maripaludis S2]
gi|44921211|emb|CAF30446.1| superfamily II helicase [Methanococcus maripaludis S2]
Length = 747
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 113/392 (28%), Positives = 195/392 (49%), Gaps = 31/392 (7%)
Query: 10 AKAAEEFKFYLEEYA--GVK-----GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENR 62
A A E+F + E+Y G+K G + TK L+K I I T EK L+ ++
Sbjct: 76 ALANEKFDEFKEKYEKYGIKVGLSIGDFD-TKENLSKFHIIITTSEKLDSLMRHEVE--W 132
Query: 63 IDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGI 122
I+++ L VIDE H++ + RG LE +++K+ L + QI +SATIGN LS ++
Sbjct: 133 INDVSLAVIDEIHLIGDNDRGGTLEVILTKLKNL--NAQIVGLSATIGNPEELSNWLNAK 190
Query: 123 TYVENSRPTKHSEYVTVDKRV-FQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLM 181
V+ RP + + + + + F K + ++ +N+ D ++ V+
Sbjct: 191 LIVDEWRPVELKKGIYFENELEFVKSPAKKIKQVSKNNI--------TDLIVDSVEEKGS 242
Query: 182 VLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEK--EDLIEALKEENDGKLSTNLEECIL 239
LIFC+SK A + ++ E + K E+++ L + + L ECI
Sbjct: 243 CLIFCNSKRNAVGEAKKHNLTKYLTRTEQHELNKLSEEILSIL--DTPTETCKALSECIK 300
Query: 240 YGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRD----SYVGR 295
G+A+HHA LT R+++E+ + +++ICCT TL+AG+NLP +R I+RD S G
Sbjct: 301 KGIAFHHAGLTYQHRKIVEDGFRNRLIKVICCTPTLSAGLNLPCRRAIVRDIKRYSQNGL 360
Query: 296 DFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLV 355
I +Q +GRAGR GL GE I+ K ++ + ++ E I S + ++
Sbjct: 361 VDIPRMEIQQCIGRAGRPGLDPYGEGIIYIKNEKEIEKAYEILTGSVENIYSKLANQKVL 420
Query: 356 DL-ILEVVAANLCSSLEDVKTLIKHTLF-YQL 385
+ IL +++ +++ +K+T + YQ
Sbjct: 421 RIHILGLISTGEIKDGQNLVNFMKNTFYAYQF 452
>gi|448605436|ref|ZP_21658090.1| ATP-dependent DNA helicase [Haloferax sulfurifontis ATCC BAA-897]
gi|445742121|gb|ELZ93618.1| ATP-dependent DNA helicase [Haloferax sulfurifontis ATCC BAA-897]
Length = 639
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 121/414 (29%), Positives = 185/414 (44%), Gaps = 37/414 (8%)
Query: 28 GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENR--IDEIGLIVIDEFHMLNEPQRGPI 85
G + + +L I + T EK + S I+ ++ + +V+DE H+L P RGP
Sbjct: 97 GDFDADEAELGDHDIVVATSEK----VDSAIRNGAPWVERLACVVVDEVHLLGAPGRGPT 152
Query: 86 LECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRV-F 144
LE +S + +Q+ A+SAT+ N A++ +++ RP V D+ V F
Sbjct: 153 LEVTLSTLQRRVPDLQLVALSATVDNPEAIADWLDAELVESTWRPVSLRTGVYADETVEF 212
Query: 145 QSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRLQFDRF 204
+ D T + V V+ L F S+ LA RL
Sbjct: 213 DDDTDLDVVVPPTGPNDDEATEATVALVEDAVETGGQCLAFVRSRREAEALADRL----- 267
Query: 205 PGTKEYKKQEKEDLIEALKEEND--GKLSTN--LEECILYGVAYHHADLTAGERRLIEEA 260
E+ AL +E D G +T L EC GV +HHA L + R +E A
Sbjct: 268 -------ADEELSPAPALGDELDELGGTATGRQLSECARTGVGFHHAGLRSAHRVAVENA 320
Query: 261 YLAGTLQIICCTSTLAAGVNLPAQRVIIRDS--YVGR--DFISLNMYKQMVGRAGRTGLQ 316
+ L +IC T TLAAGVN+PA+RV+IRD Y G ++I + QM GRAGR L
Sbjct: 321 FRDRRLAVICATPTLAAGVNVPARRVVIRDQKRYTGDAMEWIPVLDVHQMCGRAGRPHLD 380
Query: 317 ESGESIMLCKTMQDFLRFSSMMNAGPEPISSHM-DPPTLVDLILEVVAANLCSSLEDVKT 375
GE++++ F + A E + S DP L +L VVA+ SL+ V
Sbjct: 381 PFGEAVLVGDADTKAELFDRYVTADAEAVDSQFADPEALRTHVLSVVASGFADSLDGVAD 440
Query: 376 LIKHTLFYQLKSPEDQQTFLETTLSEIVASLLASKGTMLTMNEAGH-LSLTSIA 428
+ T +Y + P + L+E+VA +++ TM ++ G LS T++
Sbjct: 441 VFSAT-YYAHQHP-------DVDLAELVAEVVSELETMELLDVTGETLSATTLG 486
>gi|329765876|ref|ZP_08257442.1| DEAD/DEAH box helicase domain-containing protein [Candidatus
Nitrosoarchaeum limnia SFB1]
gi|329137719|gb|EGG41989.1| DEAD/DEAH box helicase domain-containing protein [Candidatus
Nitrosoarchaeum limnia SFB1]
Length = 709
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 118/366 (32%), Positives = 179/366 (48%), Gaps = 26/366 (7%)
Query: 28 GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILE 87
G + ++ L K ++ + T EK +I IDEIGL++ DE H++ + RGP LE
Sbjct: 107 GDFENIEKNLEKNNVLVLTNEKMDSIIRH--SAEWIDEIGLVIADEIHLIGDESRGPTLE 164
Query: 88 CVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSF 147
V++K+ L+ QI +SATI N + ++ ++ I + RP SE V V S
Sbjct: 165 MVLTKLKLLESKPQIVGLSATITNSDEIAKWLNCILVQNDWRPIPLSEGVYDGGEVIMS- 223
Query: 148 DGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRL-----QFD 202
DGK ++ SL G D + V+ L+F ++ LA + QF
Sbjct: 224 DGKKF------EIEPSLRGIPIDLGVQSVKEGGQSLVFAETRTRSKALATKAADIISQFL 277
Query: 203 RFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYL 262
++E +K K + L + +L L I GVA+HHA L R+ IE +
Sbjct: 278 EKKESEELEKISK----KILSDNEHTELVKTLAILIKKGVAFHHAGLNQNCRQTIETEFR 333
Query: 263 AGTLQIICCTSTLAAGVNLPAQRVIIR-----DSYVGRDF-ISLNMYKQMVGRAGRTGLQ 316
GT++++ T TLAAGVNLPA+RV+I ++ VG + IS+ YKQ+ GRAGR
Sbjct: 334 KGTIKLLSSTPTLAAGVNLPARRVVISNINRYNAKVGANRPISILEYKQLCGRAGRPQYD 393
Query: 317 ESGESIMLCKTMQDFLRFSSMMNAGPEPISSHM-DPPTLVDLILEVVAANLCSSLEDVKT 375
+ GESI++ D L ++ PEPI S + D +L +L V+ N ED+
Sbjct: 394 DYGESIIVGNGNSDDL-MDYYVHGEPEPILSKISDDKSLRTHVLSVIVTNPGIKKEDLFD 452
Query: 376 LIKHTL 381
TL
Sbjct: 453 FFLQTL 458
>gi|118576895|ref|YP_876638.1| superfamily II helicase [Cenarchaeum symbiosum A]
gi|118195416|gb|ABK78334.1| superfamily II helicase [Cenarchaeum symbiosum A]
Length = 707
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 115/366 (31%), Positives = 176/366 (48%), Gaps = 21/366 (5%)
Query: 28 GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILE 87
G + R L I + T E+ LI + + +DE+GL++ DE H++ + RGP LE
Sbjct: 107 GDFEKAGRSLGNNDILVLTNERMDSLIRR--RPDWMDEVGLVIADEIHLIGDRSRGPTLE 164
Query: 88 CVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSF 147
V++K+ L+ S Q+ A+SATI N + ++ +++ RP SE V D V
Sbjct: 165 MVLTKLRGLRSSPQVVALSATISNADEIAGWLDCTLVHSTWRPVPLSEGVYQDGEVAMG- 223
Query: 148 DGKSLTEIYADNLDYSLTGSGP--DAVLHLVQGNLMVLIFCSSKIACSNLALRLQFDRFP 205
DG S E+ A TG GP D V LIF ++ ++LA +
Sbjct: 224 DG-SRHEVAA-------TGGGPAVDLAAESVAEGGQSLIFADTRARSASLAAKASAVIPE 275
Query: 206 GTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGT 265
+ + + + KL+ L E + G A+HHA L R ++EE + +G
Sbjct: 276 AKGADAAKLAAAAKKIISSGGETKLAKTLAELVEKGAAFHHAGLNQDCRSVVEEEFRSGR 335
Query: 266 LQIICCTSTLAAGVNLPAQRVIIR-----DSYVG-RDFISLNMYKQMVGRAGRTGLQESG 319
++++ T TLAAGVNLPA+RV+I +S G + IS+ YKQ+ GRAGR +SG
Sbjct: 336 IRLLASTPTLAAGVNLPARRVVISSVMRYNSSSGMSEPISILEYKQLCGRAGRPQYDKSG 395
Query: 320 ESIMLCKTMQDFLRFSSMMNAGPEPISSHM-DPPTLVDLILEVVAANLCSSLEDVKTLIK 378
E+I++ D + F + PEPI S M D L +L +V + +DV
Sbjct: 396 EAIVVGGVNADEI-FDRYIGGEPEPIRSAMVDDRALRIHVLSLVTTSPGIKEDDVTEFFL 454
Query: 379 HTLFYQ 384
TL Q
Sbjct: 455 GTLGGQ 460
>gi|254166516|ref|ZP_04873370.1| Type III restriction enzyme, res subunit family [Aciduliprofundum
boonei T469]
gi|289596078|ref|YP_003482774.1| DEAD/DEAH box helicase domain protein [Aciduliprofundum boonei
T469]
gi|197624126|gb|EDY36687.1| Type III restriction enzyme, res subunit family [Aciduliprofundum
boonei T469]
gi|289533865|gb|ADD08212.1| DEAD/DEAH box helicase domain protein [Aciduliprofundum boonei
T469]
Length = 694
Score = 139 bits (350), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 117/392 (29%), Positives = 190/392 (48%), Gaps = 23/392 (5%)
Query: 4 EKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRI 63
EKY+ L + F+ + + A G Y L + I T EK ++ ++
Sbjct: 81 EKYEELRR----FEKFGMKVALAMGDYDSPAGYLKYYDVVIATSEKMDSILRHDLEYAY- 135
Query: 64 DEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGIT 123
+G++++DE H+L E RGP LE V+SK+ + QI A+SATI N ++ ++ G
Sbjct: 136 -NLGVVIVDEVHLLGEASRGPTLEMVISKIRDVNDEAQIIALSATINNSQEIAEWLNGEH 194
Query: 124 YVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVL 183
RP V D + F+ EI D ++ + V ++ VL
Sbjct: 195 VYSEFRPVPLRLGVYYDDTLL--FEDGEKVEIKHDAINIG------NLVRRSIELGGQVL 246
Query: 184 IFCSSKIACSNLALRLQFDRFPG-TKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGV 242
IF + + + +LA +L+ R G E K E L +++ EE S + + I +GV
Sbjct: 247 IFVNRRKSAESLAEKLR-RRVEGYLNEEDKNELYALSDSIMEEEYTIYSERIAKLIRHGV 305
Query: 243 AYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRD--SYVGRD--FI 298
A+HHA L+ R ++E A+ L++I T TLAAG+NLP++ VI+RD Y G +I
Sbjct: 306 AFHHAGLSNRHRSIVERAFKNKWLKVIVATPTLAAGINLPSRTVIVRDVTRYDGFSSVYI 365
Query: 299 SLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGP-EPISSHM-DPPTLVD 356
+ KQM+GRAGR + GE I+ ++ + + M G E I S + + L
Sbjct: 366 PVMEVKQMLGRAGRPKYDKYGEGIIYARSEKRAHDYMEMYIRGEIEDIESQLSNESALRT 425
Query: 357 LILEVVAANLCSSLEDVKTLIKHTLFYQLKSP 388
IL ++A+++ + E++ K T FY K P
Sbjct: 426 HILALIASDMINKEEEIFEFFKKT-FYGFKMP 456
>gi|399576322|ref|ZP_10770079.1| superfamily ii helicase [Halogranum salarium B-1]
gi|399239033|gb|EJN59960.1| superfamily ii helicase [Halogranum salarium B-1]
Length = 817
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 124/427 (29%), Positives = 202/427 (47%), Gaps = 54/427 (12%)
Query: 13 AEEFKFYLEEYA------GVK-GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENR--I 63
A E K E +A GV G Y + L + I + T EK + SL++ +
Sbjct: 81 ASEKKAEFERWAEYGVTVGVSTGNYQSSGEWLGSRDIIVATSEK----VDSLVRNGAPWV 136
Query: 64 DEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGIT 123
D++ +V DE H++++ RGP LE ++K+ + +Q A+SAT+GN + ++ +++
Sbjct: 137 DDLSCVVADEVHLVDDRHRGPTLEVTLAKLRKINPGLQTVALSATVGNADEVADWLDATL 196
Query: 124 YVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNL--- 180
+ RP V + +FD S E+ + G LV L
Sbjct: 197 VQSDWRPIDLKMGVHYGSAI--NFDDGSQREVPVER--------GQKKTAALVDDTLDEG 246
Query: 181 -MVLIFCSSKIACSNLALRLQF---DRFPGTKEYKKQEKEDLIEALKE---ENDGKLSTN 233
L+F +S+ + A RL R G QE++DL E KE +D S +
Sbjct: 247 GSSLVFVNSRRNAESEARRLADVTKARLTG------QERDDLRELAKELRDVSDTDTSDD 300
Query: 234 LEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRD--- 290
L + + G A+HHA L + R L+EEA+ ++++C T TLAAGVN P++RVI+RD
Sbjct: 301 LADAVAKGAAFHHAGLASEHRALVEEAFRDRLIKVVCATPTLAAGVNTPSRRVIVRDWRR 360
Query: 291 ---SYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCK---TMQDFLRFSSMMNAGPEP 344
+ G + + QM GRAGR GL GE+++L K TM + F + A E
Sbjct: 361 YDGEFGGMKPLDVLEVHQMCGRAGRPGLDPYGEAVLLAKDSETMDEL--FERYVWAEAED 418
Query: 345 ISSHMDP-PTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQLKSPEDQQTFLETTLSEIV 403
+ S + P L +L VA+ ++ + + + TL Y ++ E + LET ++
Sbjct: 419 VRSKLAAEPALRTHLLATVASGFANTRQGLLDFLDQTL-YATQTTESGR--LETVTDTVL 475
Query: 404 ASLLASK 410
A L A++
Sbjct: 476 AYLEANE 482
>gi|399575010|ref|ZP_10768768.1| superfamily ii helicase [Halogranum salarium B-1]
gi|399239278|gb|EJN60204.1| superfamily ii helicase [Halogranum salarium B-1]
Length = 643
Score = 139 bits (349), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 120/408 (29%), Positives = 192/408 (47%), Gaps = 35/408 (8%)
Query: 28 GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE--NRIDEIGLIVIDEFHMLNEPQRGPI 85
G Y +L I + T EK + S I+ N + ++ +V+DE H+L RGP
Sbjct: 97 GDYDSPADELADHDIVVATSEK----VDSAIRNGANWVADLACVVVDEVHLLGAEGRGPT 152
Query: 86 LECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVENS-RPTKHSEYVTVDKRVF 144
LE ++ + +QI A+SAT+ N ++ ++ G T VE++ RP V D V
Sbjct: 153 LEVTLANLQRRAPGVQIVALSATVDNPEDIADWL-GATLVESTWRPVDLRTGVYADGLV- 210
Query: 145 QSFDGKSLTEIYADNLDYSLTGSGPD----AVLHLVQGNL-----MVLIFCSSKIACSNL 195
+ DG LT ++D T +G D A + LV+ + L F S+ L
Sbjct: 211 EFNDGTELTV----DVDAGSTPNGADEDTEATVALVEDAVHNAGGQCLAFVRSRREAEAL 266
Query: 196 ALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERR 255
A RL + G D + A+ + G L +C+ GVA+HHA L + R
Sbjct: 267 AERLARE---GLATGASATVADDLTAVDGTSTGH---RLADCVRDGVAFHHAGLRSTHRA 320
Query: 256 LIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS--YVGR--DFISLNMYKQMVGRAG 311
++E A+ L +IC T TLAAGVN+PA+RV++RD Y G +F+ + QM GRAG
Sbjct: 321 VVETAFRNRDLAVICATPTLAAGVNVPARRVVVRDQQRYTGSSMEFLPVLEVHQMCGRAG 380
Query: 312 RTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHM-DPPTLVDLILEVVAANLCSSL 370
R L GE++++ ++A PE + S + D L +L +VA S
Sbjct: 381 RPHLDPYGEAVLVGDESSRAELDERYVDADPEAVESKLRDRTALTTHVLSIVATGFADSH 440
Query: 371 EDVKTLIKHTLFYQLKSP-EDQQTFLETTLSEIVASLLASKGTMLTMN 417
+ +++ T FY ++P D ++ +E+V + ++GT T
Sbjct: 441 ATILDVLEAT-FYAHQTPVADLSGIVDDVTAELVEMGMLTEGTSETFT 487
>gi|16081891|ref|NP_394295.1| ski2-like helicase [Thermoplasma acidophilum DSM 1728]
gi|18202974|sp|Q9HJX7.1|HELS_THEAC RecName: Full=Putative ski2-type helicase
gi|10640112|emb|CAC11964.1| DNA helicase related protein [Thermoplasma acidophilum]
Length = 674
Score = 139 bits (349), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 102/369 (27%), Positives = 171/369 (46%), Gaps = 47/369 (12%)
Query: 28 GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILE 87
G Y + + + I T EK L+ ++++GL+V+DE H + + RGP LE
Sbjct: 100 GDYDDSPDFIKRYDAVILTSEKADSLLHH--DPYILNDVGLLVLDEIHTIGDESRGPTLE 157
Query: 88 CVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSF 147
V S Y+ ++I A+SAT+ N L+++++ + RP + +++
Sbjct: 158 TVASIARYVNPDVRILALSATVSNAMELASWLDASLIKSDFRPVPLKTGILYRDQLY--L 215
Query: 148 DGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRLQFDRFPGT 207
DGK + + + + + V+ N VL+F SS+ + A
Sbjct: 216 DGKRRSGVSINQI-----------IRETVEDNGQVLMFVSSRKKAEDTA----------- 253
Query: 208 KEYKKQEKEDLIEALKEENDGKLSTN--------LEECILYGVAYHHADLTAGERRLIEE 259
DL + + + K+S++ L E + GVA+HHA L+ +R IE
Sbjct: 254 --------RDLAQIFGSDANIKISSDETNVYDDMLNEILPRGVAFHHAGLSNDQRAFIER 305
Query: 260 AYLAGTLQIICCTSTLAAGVNLPAQRVIIRD-SYVGRDFISL--NM-YKQMVGRAGRTGL 315
+ A +++I T TLAAGVNLPA+ VI+RD + G D IS NM KQM+GRAGR G
Sbjct: 306 EFRARRIKVIVATPTLAAGVNLPARLVIVRDITRWGSDGISYLTNMEIKQMIGRAGRPGY 365
Query: 316 QESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDL-ILEVVAANLCSSLEDVK 374
+ G ++ + + ++ PEP+ S++ V L ++ L S D+
Sbjct: 366 DQYGIGLIYVSSQSSYEAAKDYLSTDPEPVVSYLGNEAKVRFNTLAAISMGLARSPSDIM 425
Query: 375 TLIKHTLFY 383
+ TLF+
Sbjct: 426 KFYETTLFF 434
>gi|448451566|ref|ZP_21592866.1| ski2-like helicase [Halorubrum litoreum JCM 13561]
gi|445810422|gb|EMA60447.1| ski2-like helicase [Halorubrum litoreum JCM 13561]
Length = 818
Score = 139 bits (349), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 110/394 (27%), Positives = 186/394 (47%), Gaps = 44/394 (11%)
Query: 15 EFKFYLEEYA---GVK-GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENR--IDEIGL 68
EF+ + EE+ GV G Y L + I + T EK + SLI+ ID++
Sbjct: 87 EFERW-EEFGVTVGVSTGNYDSDGEWLASRDIIVATSEK----VDSLIRNGAPWIDDLTC 141
Query: 69 IVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVENS 128
+V DE H++++ RGP LE ++K+ + +Q A+SAT+GN + ++ +++ +
Sbjct: 142 VVSDEVHLVDDSHRGPTLEVTLAKLRKVNPGLQTVALSATVGNADVIADWLDAELVESDW 201
Query: 129 RPTKHSEYVTVDKRVFQSFDGKSLTEI------------YADNLDYSLTGSGPDAVLHLV 176
RP + V + +FD S E+ AD LD G G +
Sbjct: 202 RPIELRTGVHFGNAI--NFDDGSQREVPVERGEDQTARLVADALDTEEDGQGGSS----- 254
Query: 177 QGNLMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEE 236
L+F +S+ + A +L P ++ +L E ++ +D S +L +
Sbjct: 255 ------LVFVNSRRNAESSARKLGEVTAPRLTGDERDRLRELAEEIRGVSDTDTSEDLAD 308
Query: 237 CILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRD------ 290
+ G A+HHA L + R LIE+A+ ++ + T TLAAGVN PA+RVI+RD
Sbjct: 309 AVEQGSAFHHAGLASEHRSLIEDAFRDRLIKCVSATPTLAAGVNTPARRVIVRDWRRYDG 368
Query: 291 SYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLR-FSSMMNAGPEPISSHM 349
+ G + + QM GRAGR GL GE+++L + F + A EP+ S +
Sbjct: 369 EFGGMQPLDVLEIHQMCGRAGRPGLDPYGEAVLLANSADTREELFDRYVWAEAEPVRSKL 428
Query: 350 DP-PTLVDLILEVVAANLCSSLEDVKTLIKHTLF 382
P L +L VA+ ++ + + + + +TL+
Sbjct: 429 AAEPALRTHVLATVASGFAATRDGLLSFLDNTLY 462
>gi|254168485|ref|ZP_04875329.1| Type III restriction enzyme, res subunit family [Aciduliprofundum
boonei T469]
gi|197622540|gb|EDY35111.1| Type III restriction enzyme, res subunit family [Aciduliprofundum
boonei T469]
Length = 694
Score = 139 bits (349), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 116/394 (29%), Positives = 191/394 (48%), Gaps = 27/394 (6%)
Query: 4 EKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRI 63
EKY+ L + F+ + + A G Y L + I T EK ++ ++
Sbjct: 81 EKYEELRR----FEKFGMKVALAMGDYDSPAGYLKYYDVVIATSEKMDSILRHDLEYAY- 135
Query: 64 DEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGIT 123
+G++++DE H+L E RGP LE V+SK+ + QI A+SATI N ++ ++ G
Sbjct: 136 -NLGVVIVDEVHLLGEASRGPTLEIVISKIRDVNDEAQIIALSATINNSQEIAEWLNGEH 194
Query: 124 YVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVL 183
RP V D + F+ EI D ++ + V ++ VL
Sbjct: 195 VYSEFRPVPLRLGVYYDDTLL--FEDGEKVEIKHDAINIG------NLVRRSIELGGQVL 246
Query: 184 IFCSSKIACSNLALRLQFDRFPG-TKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGV 242
IF + + + +LA +L+ R G E K E L +++ +E S + + I +GV
Sbjct: 247 IFVNRRKSAESLAEKLR-RRVEGYLSEEDKSELYALADSIMDEEYTIYSERIAKLIRHGV 305
Query: 243 AYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRD--SYVGRD--FI 298
A+HHA L+ R ++E A+ L++I T TLAAG+NLP++ VI+RD Y G +I
Sbjct: 306 AFHHAGLSNRHRSIVERAFKNKWLKVIVATPTLAAGINLPSRTVIVRDVTRYDGFSSVYI 365
Query: 299 SLNMYKQMVGRAGRTGLQESGESIMLCKT---MQDFLRFSSMMNAGPEPISSHM-DPPTL 354
+ KQM+GRAGR + GE I+ ++ QD++ + E I S + + L
Sbjct: 366 PVMEVKQMLGRAGRPKYDKYGEGIIYARSEKRAQDYMEM--YIRGETEDIESQLSNESAL 423
Query: 355 VDLILEVVAANLCSSLEDVKTLIKHTLFYQLKSP 388
IL ++A+++ + E++ K T FY K P
Sbjct: 424 RTHILALIASDMINKEEEIFEFFKKT-FYGFKMP 456
>gi|448574983|ref|ZP_21641506.1| ATP-dependent DNA helicase [Haloferax larsenii JCM 13917]
gi|445732662|gb|ELZ84244.1| ATP-dependent DNA helicase [Haloferax larsenii JCM 13917]
Length = 639
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 127/435 (29%), Positives = 199/435 (45%), Gaps = 47/435 (10%)
Query: 10 AKAAEEFKFYLEEYAGVK-----GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE--NR 62
A A E+++ + +E GV G + + L++ I + T EK + S I+ +
Sbjct: 75 ALAREKYETF-DELPGVSVGISTGDFDSAEEDLSEYDIVVATSEK----VDSAIRNGASW 129
Query: 63 IDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGI 122
++ + +V+DE H+L P RGP LE ++ + +Q+ A+SAT+ N ++++++
Sbjct: 130 VESLACVVVDEVHLLGAPGRGPTLEMTLATLQRRVPDLQLVALSATVDNPETIASWLDAD 189
Query: 123 TYVENSRPTKHSEYVTVDKRVFQSFD-GKSLTEIYADNLDYSLTGSGPDA--------VL 173
RP V D+ V SFD G SL +D G DA V
Sbjct: 190 LVESTWRPVSLRTGVYSDESV--SFDDGTSLA------VDVPPLGPKDDADTEATVSLVA 241
Query: 174 HLVQGNLMVLIFCSSKIACSNLALRL-QFDRFPGTKEYKKQEKEDLIEALKEENDGKLST 232
V L F S+ +LA RL + D P T DL + L+E
Sbjct: 242 DAVTNGGQCLAFVRSRREAESLAERLAEEDLSPAT---------DLGDELRELGGTATGA 292
Query: 233 NLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS- 291
+L +C GV +HHA L + R +E A+ L +IC T TLAAGVN+PA+RV+IRD
Sbjct: 293 HLADCASTGVGFHHAGLRSSHRAAVETAFRERRLAVICATPTLAAGVNVPARRVVIRDQK 352
Query: 292 -YVGR--DFISLNMYKQMVGRAGRTGLQESGESIMLC-KTMQDFLRFSSMMNAGPEPISS 347
Y G ++I + QM GRAGR L GE++++ T +D L + A E + S
Sbjct: 353 RYTGDAMEWIPVLDVHQMCGRAGRPHLDPYGEAVLVGDDTTRDEL-VERYVEADAEAVDS 411
Query: 348 HM-DPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQLKSPEDQQTFLETTLSEI-VAS 405
D +L +L VVA+ S+ V + T + +S D + +SE+
Sbjct: 412 QFADRESLRTHVLSVVASGFADSVAGVVDVFAATYYAHQQSDVDLTALVSDVVSELERME 471
Query: 406 LLASKGTMLTMNEAG 420
+L G+ L+ G
Sbjct: 472 MLTVDGSTLSATTLG 486
>gi|284173146|ref|ZP_06387115.1| DEAD/DEAH box helicase domain protein [Sulfolobus solfataricus
98/2]
gi|384432805|ref|YP_005642163.1| DEAD/DEAH box helicase [Sulfolobus solfataricus 98/2]
gi|261600959|gb|ACX90562.1| DEAD/DEAH box helicase domain protein [Sulfolobus solfataricus
98/2]
Length = 715
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 111/343 (32%), Positives = 160/343 (46%), Gaps = 35/343 (10%)
Query: 24 AGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRG 83
A G Y L I I T EK L + ++E+ V+DE H LN+P+RG
Sbjct: 106 AMTSGDYDTDDAWLKNYDIIITTYEKLDSLWRH--RPEWLNEVNYFVLDELHYLNDPERG 163
Query: 84 PILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRV 143
P++E V + K + A+SATI N ++ ++ N RP E V +R
Sbjct: 164 PVVESVTIRA----KRRNLLALSATISNYKQIAKWLGAEPVATNWRPVPLIEGVIYPERK 219
Query: 144 FQSFDGKSLTEIYADNLDYSLTGSGPDAV----LHLVQGNLMVLIFCSSKIACSNLALRL 199
+ ++ I+ DN + G DA+ L + N VL+F +S+ + AL++
Sbjct: 220 KKEYN-----VIFKDNTTKKVHGD--DAIIAYTLDSLSKNGQVLVFRNSRKMAESTALKI 272
Query: 200 QFDRFPGTKEYKKQEKEDLIEALK-----EENDGKLSTNLEECILYGVAYHHADLTAGER 254
+ ++ L E LK EE L+ I GVAYHHA L+ R
Sbjct: 273 A-----NYMNFVSLDENALSEILKQLDDIEEGGSDEKELLKSLISKGVAYHHAGLSKALR 327
Query: 255 RLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGR-------DFISLNMYKQMV 307
LIEE + +++I T TLAAGVNLPA+ VII D Y D I + YKQM
Sbjct: 328 DLIEEGFRQRKIKVIVATPTLAAGVNLPARTVIIGDIYRFNKKIAGYYDEIPIMEYKQMS 387
Query: 308 GRAGRTGLQESGESIMLCKTMQDFLR-FSSMMNAGPEPISSHM 349
GRAGR G + GESI++ + +D R F + + EPI S +
Sbjct: 388 GRAGRPGFDQIGESIVVVRDKEDVDRVFKKYVLSDVEPIESKL 430
>gi|165761214|pdb|2VA8|A Chain A, Dna Repair Helicase Hel308
gi|165761215|pdb|2VA8|B Chain B, Dna Repair Helicase Hel308
gi|156718102|emb|CAO85626.1| DNA helicase [Sulfolobus solfataricus]
Length = 715
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 111/343 (32%), Positives = 160/343 (46%), Gaps = 35/343 (10%)
Query: 24 AGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRG 83
A G Y L I I T EK L + ++E+ V+DE H LN+P+RG
Sbjct: 106 AMTSGDYDTDDAWLKNYDIIITTYEKLDSLWRH--RPEWLNEVNYFVLDELHYLNDPERG 163
Query: 84 PILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRV 143
P++E V + K + A+SATI N ++ ++ N RP E V +R
Sbjct: 164 PVVESVTIRA----KRRNLLALSATISNYKQIAKWLGAEPVATNWRPVPLIEGVIYPERK 219
Query: 144 FQSFDGKSLTEIYADNLDYSLTGSGPDAV----LHLVQGNLMVLIFCSSKIACSNLALRL 199
+ ++ I+ DN + G DA+ L + N VL+F +S+ + AL++
Sbjct: 220 KKEYN-----VIFKDNTTKKVHGD--DAIIAYTLDSLSKNGQVLVFRNSRKMAESTALKI 272
Query: 200 QFDRFPGTKEYKKQEKEDLIEALK-----EENDGKLSTNLEECILYGVAYHHADLTAGER 254
+ ++ L E LK EE L+ I GVAYHHA L+ R
Sbjct: 273 A-----NYMNFVSLDENALSEILKQLDDIEEGGSDEKELLKSLISKGVAYHHAGLSKALR 327
Query: 255 RLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGR-------DFISLNMYKQMV 307
LIEE + +++I T TLAAGVNLPA+ VII D Y D I + YKQM
Sbjct: 328 DLIEEGFRQRKIKVIVATPTLAAGVNLPARTVIIGDIYRFNKKIAGYYDEIPIMEYKQMS 387
Query: 308 GRAGRTGLQESGESIMLCKTMQDFLR-FSSMMNAGPEPISSHM 349
GRAGR G + GESI++ + +D R F + + EPI S +
Sbjct: 388 GRAGRPGFDQIGESIVVVRDKEDVDRVFKKYVLSDVEPIESKL 430
>gi|448514137|ref|ZP_21616889.1| ski2-like helicase [Halorubrum distributum JCM 9100]
gi|448526347|ref|ZP_21619801.1| ski2-like helicase [Halorubrum distributum JCM 10118]
gi|445692805|gb|ELZ44974.1| ski2-like helicase [Halorubrum distributum JCM 9100]
gi|445699007|gb|ELZ51042.1| ski2-like helicase [Halorubrum distributum JCM 10118]
Length = 818
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 110/394 (27%), Positives = 186/394 (47%), Gaps = 44/394 (11%)
Query: 15 EFKFYLEEYA---GVK-GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENR--IDEIGL 68
EF+ + EE+ GV G Y L + I + T EK + SLI+ ID++
Sbjct: 87 EFERW-EEFGVTVGVSTGNYDSDGEWLASRDIIVATSEK----VDSLIRNGAPWIDDLTC 141
Query: 69 IVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVENS 128
+V DE H++++ RGP LE ++K+ + +Q A+SAT+GN + ++ +++ +
Sbjct: 142 VVSDEVHLVDDSHRGPTLEVTLAKLRKVNPGLQTVALSATVGNADVIADWLDAELVESDW 201
Query: 129 RPTKHSEYVTVDKRVFQSFDGKSLTEI------------YADNLDYSLTGSGPDAVLHLV 176
RP + V + +FD S E+ AD LD G G +
Sbjct: 202 RPIELRTGVHFGNAI--NFDDGSQREVPVERGEDQTAKLVADALDTEEDGQGGSS----- 254
Query: 177 QGNLMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEE 236
L+F +S+ + A +L P ++ +L E ++ +D S +L +
Sbjct: 255 ------LVFVNSRRNAESSARKLGEVTAPRLTGDERDRLRELAEEIRGVSDTDTSEDLAD 308
Query: 237 CILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRD------ 290
+ G A+HHA L + R LIE+A+ ++ + T TLAAGVN PA+RVI+RD
Sbjct: 309 AVEQGSAFHHAGLASEHRSLIEDAFRDRLIKCVSATPTLAAGVNTPARRVIVRDWRRYDG 368
Query: 291 SYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLR-FSSMMNAGPEPISSHM 349
+ G + + QM GRAGR GL GE+++L + F + A EP+ S +
Sbjct: 369 EFGGMQPLDVLEIHQMCGRAGRPGLDPYGEAVLLANSADTREELFDRYVWAEAEPVRSKL 428
Query: 350 DP-PTLVDLILEVVAANLCSSLEDVKTLIKHTLF 382
P L +L VA+ ++ + + + + +TL+
Sbjct: 429 AAEPALRTHVLATVASGFAATRDGLLSFLDNTLY 462
>gi|126180439|ref|YP_001048404.1| ski2-like helicase [Methanoculleus marisnigri JR1]
gi|125863233|gb|ABN58422.1| DEAD/DEAH box helicase domain protein [Methanoculleus marisnigri
JR1]
Length = 712
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 129/436 (29%), Positives = 204/436 (46%), Gaps = 49/436 (11%)
Query: 10 AKAAEEFKFYLEEYAG-------VKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENR 62
A A+E+F EE++G G + L + I + T EK + SL++ NR
Sbjct: 78 ALASEKF----EEFSGKGLRVGIATGDFDRRDEYLGRNDIIVATSEK----VDSLLR-NR 128
Query: 63 ---IDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFI 119
+ EI L+V+DE H++++P RG +E V++K+ + +QI A+SATIGN L+ ++
Sbjct: 129 TPWLAEISLLVVDEVHLIDDPSRGATVEMVIAKLRHKNPGMQIIALSATIGNPADLAGWL 188
Query: 120 EGITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGN 179
+ RP E V + + + S+ E+ + L D VL V
Sbjct: 189 DAELVESEWRPVDLREGVFFEDGIRFA---DSVREVERKSKYEDL-----DLVLDTVTEG 240
Query: 180 LMVLIFCSSKIACSNLALRLQFD---RFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEE 236
L+F SS+ A R P Y D I + + GK+ L
Sbjct: 241 GQCLVFVSSRKNAEAFAKRAASGLKIANPILAGYA-----DKIRSSASTDMGKI---LAA 292
Query: 237 CILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRD-----S 291
C+ G A+HHA L+ ER+L+E + G +++I T TLAAG+NLPA+RVI+RD +
Sbjct: 293 CVAQGAAFHHAGLSREERQLVEAGFREGQIKVISSTPTLAAGLNLPARRVIVRDYLRFNA 352
Query: 292 YVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKT--MQDFLRFSSMMNAGPEPISSH- 348
G I + Y+QM GRAGR L GE++++ K+ M D L F + A E + S
Sbjct: 353 GEGMMPIPVREYRQMAGRAGRPRLDPYGEAVLIAKSEEMVDEL-FDYYIEAMAEDVRSRC 411
Query: 349 MDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLF-YQLKSPEDQQTFLETTLSEIV-ASL 406
+ L IL ++A +V + T + +Q +SP + ++ L + A +
Sbjct: 412 AEEAVLCTHILSLIATGFARERGEVLGFMDGTFYAHQGESPRALKRAVDRVLEFLREAEM 471
Query: 407 LASKGTMLTMNEAGHL 422
+ G L E G L
Sbjct: 472 ITEVGEWLEATEYGSL 487
>gi|448427337|ref|ZP_21583690.1| ski2-like helicase [Halorubrum terrestre JCM 10247]
gi|445678788|gb|ELZ31273.1| ski2-like helicase [Halorubrum terrestre JCM 10247]
Length = 818
Score = 138 bits (348), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 110/394 (27%), Positives = 186/394 (47%), Gaps = 44/394 (11%)
Query: 15 EFKFYLEEYA---GVK-GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENR--IDEIGL 68
EF+ + EE+ GV G Y L + I + T EK + SLI+ ID++
Sbjct: 87 EFERW-EEFGVTVGVSTGNYDSDGEWLASRDIIVATSEK----VDSLIRNGAPWIDDLTC 141
Query: 69 IVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVENS 128
+V DE H++++ RGP LE ++K+ + +Q A+SAT+GN + ++ +++ +
Sbjct: 142 VVSDEVHLVDDSHRGPTLEVTLAKLRKVNPGLQTVALSATVGNADVIADWLDAELVESDW 201
Query: 129 RPTKHSEYVTVDKRVFQSFDGKSLTEI------------YADNLDYSLTGSGPDAVLHLV 176
RP + V + +FD S E+ AD LD G G +
Sbjct: 202 RPIELRTGVHFGNAI--NFDDGSQREVPVERGEDQTARLVADALDTEEDGQGGSS----- 254
Query: 177 QGNLMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEE 236
L+F +S+ + A +L P ++ +L E ++ +D S +L +
Sbjct: 255 ------LVFVNSRRNAESSARKLGEVTAPRLTGDERDRLRELAEEIRGVSDTDTSEDLAD 308
Query: 237 CILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRD------ 290
+ G A+HHA L + R LIE+A+ ++ + T TLAAGVN PA+RVI+RD
Sbjct: 309 AVEQGSAFHHAGLASEHRSLIEDAFRDRLIKCVSATPTLAAGVNTPARRVIVRDWRRYDG 368
Query: 291 SYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLR-FSSMMNAGPEPISSHM 349
+ G + + QM GRAGR GL GE+++L + F + A EP+ S +
Sbjct: 369 EFGGMQPLDVLEIHQMCGRAGRPGLDPYGEAVLLANSADTREELFDRYVWAEAEPVHSKL 428
Query: 350 DP-PTLVDLILEVVAANLCSSLEDVKTLIKHTLF 382
P L +L VA+ ++ + + + + +TL+
Sbjct: 429 AAEPALRTHVLATVASGFAATRDGLLSFLDNTLY 462
>gi|257386754|ref|YP_003176527.1| ski2-like helicase [Halomicrobium mukohataei DSM 12286]
gi|257169061|gb|ACV46820.1| DEAD/DEAH box helicase domain protein [Halomicrobium mukohataei DSM
12286]
Length = 808
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 167/698 (23%), Positives = 299/698 (42%), Gaps = 73/698 (10%)
Query: 14 EEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENR--IDEIGLIVI 71
EEF+ Y + G Y L K I + T EK + SL++ + +D++ +V
Sbjct: 113 EEFEQYGLDVGVSTGNYESDGGWLADKDIVVATSEK----VDSLVRNDAPWLDDLACVVS 168
Query: 72 DEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVENSRPT 131
DE H++++ +RGP LE ++K+ + +Q A+SATIGN + L+ +++ + RP
Sbjct: 169 DEVHLVDDAERGPTLEVTLAKLRRINPDMQTVALSATIGNADVLAEWLDAELVDSDWRPI 228
Query: 132 KHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIA 191
+ V + + + S +E+ N + V + + L+F +S+
Sbjct: 229 SLKKGVHFGQALH--LEDGSQSELPVRNSEKQTAA----IVRDTLDDDGSTLVFVNSRRN 282
Query: 192 CSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTA 251
A RL ++++ D+ +++ +D + S +L + + G A+HHA + +
Sbjct: 283 AEAAAGRLASVTREALTPAEREQLADVAAEIRDVSDTETSDDLADAVADGAAFHHAGIAS 342
Query: 252 GERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIR------DSYVGRDFISLNMYKQ 305
G R L+E+A+ L+++ T TLAAGVN P++RV++R + G +S+ Q
Sbjct: 343 GHRELVEDAFRDRLLKVVSATPTLAAGVNTPSRRVVVRDWRRYDGTAGGMQPLSVLEVHQ 402
Query: 306 MVGRAGRTGLQESGESIMLCKTMQDFLR-FSSMMNAGPEPISSHMDP-PTLVDLILEVVA 363
M+GRAGR GL GE+I+ + + F + A PEP+ S + P L +L VA
Sbjct: 403 MMGRAGRPGLDPYGEAIIPAASHDELDELFDRYVWADPEPVQSKLAAEPALRTHLLATVA 462
Query: 364 ANLCSSLEDVKTLIKHTLFYQLKSPEDQQTFLETTLSEIVASL-----LASKGTMLTMNE 418
+ S + + ++ TL+ + D+ L + E++ L L G L+
Sbjct: 463 SGFARSRDGLLEFLERTLY---ATQTDESGRLARVVDEVLGYLQRNDFLERDGEELSATS 519
Query: 419 AGH----LSLTSIAKAAVQAGL-SHDVCLIIYSDLLHNKLNFCLLNSLH----------- 462
GH L L ++ A + GL S D F + L
Sbjct: 520 LGHTVSRLYLDPMSAAEIIDGLRSGGGSAANGDDASEEPAGFTTASDLADEAGGDEAKDP 579
Query: 463 MLFLVIPLEYRIPSDGILLSRSKVYDRYTKFHPQTLRVAEALGVTENLVALNVTGKLKDE 522
+ L R P L RS + Y++ + R AE LG + + +D+
Sbjct: 580 TAMGLYHLVARTPDMYELYLRSGDEEEYSQIAFE--REAEFLG--------RMPSEFEDD 629
Query: 523 K-KALLCRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELP 581
+ + L A +L D + + ++ YG+ ++ + + EL
Sbjct: 630 RFEDWLAALKTARLLEDWASEVDEDEITDRYGVGPGDIRGKVESAQWLLGAAESLASELG 689
Query: 582 ELWCYKQLLTDLPQTLMYCRAP---NLR-ALMDLPGVK-IG--RARQLLNAGYSSLELIA 634
D + R +R L+DL GV+ +G RAR+L +AG S +
Sbjct: 690 ---------LDAAPAIRRARTRVEHGVREELVDLAGVRGVGRKRARRLFDAGIESRADLR 740
Query: 635 RADAKEMVAKIRHLPLRSARNLISAAKLHFITKMDKVE 672
A+ ++A +R ++A N++ A H MD +E
Sbjct: 741 DAEKSVVLAALRGR-AKTAENVLENAG-HRDPSMDGIE 776
>gi|433640117|ref|YP_007285877.1| superfamily II helicase [Halovivax ruber XH-70]
gi|433291921|gb|AGB17744.1| superfamily II helicase [Halovivax ruber XH-70]
Length = 796
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 122/407 (29%), Positives = 208/407 (51%), Gaps = 34/407 (8%)
Query: 14 EEFKFYLEEYA---GVK-GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE--NRIDEIG 67
+EF+ Y EE+ GV G Y T L + I + T EK + SL++ + + ++
Sbjct: 86 DEFEAY-EEFGVSVGVTTGNYESTDDWLATRDIVVATSEK----VDSLVRNGADWLSDLT 140
Query: 68 LIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVEN 127
+V DE H++++ RGP LE ++K+ L ++Q+ A+SAT+GN ++ +++ +
Sbjct: 141 CVVSDEVHLIDDRNRGPTLEVTLAKLRALNPALQVVALSATVGNAGEIADWLDAELVASD 200
Query: 128 SRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDA-VLHLVQGNLMVLIFC 186
RP V + SFD S E+ D + S DA V +V + L+F
Sbjct: 201 WRPIDLQMGVHYGNAI--SFDDGSKREVPVDGSE-----SQEDALVRDIVAEDASALVFV 253
Query: 187 SSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHH 246
+S+ A RL P + +K ++L + +++ +D + ST+L + G A+HH
Sbjct: 254 NSRRNAEAAARRLANVVAPELDDEEKAALDELADDIRDVSDSETSTDLAAAVEKGGAFHH 313
Query: 247 ADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIR-----DSYVGRDFISLN 301
A L + R L+E+A+ L++I T TLAAGVN PA+RV++R DS G L+
Sbjct: 314 AGLASEHRSLVEDAFRDRLLKVISATPTLAAGVNTPARRVVVRDWRRFDSTAGG-MTPLD 372
Query: 302 MYK--QMVGRAGRTGLQESGESIMLCKT--MQDFLRFSSMMNAGPEPISSHMDP-PTLVD 356
+ + QM+GRAGR GL GE+++L K+ QD L F + A E + S + P L
Sbjct: 373 VLEVHQMMGRAGRPGLDPYGEAVLLAKSHDEQDDL-FDRYIWAEAEDVRSKLAAEPALRT 431
Query: 357 LILEVVAANLCSSLEDVKTLIKHTLFYQLKSPEDQQTFLETTLSEIV 403
+L +A+ S+ + + + + TL+ S D++ LE+ ++
Sbjct: 432 HVLATIASGFASTRDGLLSFMNETLY---ASQTDERGRLESVTDTVL 475
>gi|15791161|ref|NP_280985.1| ski2-like helicase [Halobacterium sp. NRC-1]
gi|169236917|ref|YP_001690117.1| ski2-like helicase [Halobacterium salinarum R1]
gi|18202982|sp|Q9HMV6.1|HELS_HALSA RecName: Full=Putative ski2-type helicase
gi|226740605|sp|B0R7Q2.1|HELS_HALS3 RecName: Full=Putative ski2-type helicase
gi|10581777|gb|AAG20465.1| DNA repair protein [Halobacterium sp. NRC-1]
gi|167727983|emb|CAP14771.1| ATP-dependent DNA helicase Hel308 [Halobacterium salinarum R1]
Length = 783
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 108/388 (27%), Positives = 184/388 (47%), Gaps = 34/388 (8%)
Query: 13 AEEFKFYLEEYA---GVK-GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENR--IDEI 66
A+EF+ + E + GV G Y +L I + T EK + SL++ ID++
Sbjct: 94 AQEFEAF-ERFGLSVGVSTGNYERDGARLADNDIVVATSEK----VDSLVRNGAGWIDDL 148
Query: 67 GLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVE 126
+V DE H++++ RGP LE ++K+ +Q+ A+SAT+GN L+ +++
Sbjct: 149 SCVVADEVHLVDDDHRGPTLEVTLAKLRQQVADLQVVALSATVGNAGELAAWLDAELVDS 208
Query: 127 NSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLT-GSGPDA---VLHLVQGNLMV 182
+ RP ++ R + G+SL Y D L+ GSG V + +
Sbjct: 209 DWRP--------IELRTGVHY-GQSLH--YDDGTQAELSVGSGSQTAAVVADTLADDGST 257
Query: 183 LIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGV 242
L+F +S+ A RL +++ D+ ++ +D + S L + + G
Sbjct: 258 LVFVNSRRNAEASARRLADVTGNALSSAERERLADIAAEIRGVSDTETSDELADAVASGA 317
Query: 243 AYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRD------SYVGRD 296
A+HHA L R L+EEA+ ++ + T TLAAGVN PA+RV++RD + G
Sbjct: 318 AFHHAGLAREHRELVEEAFRDRLVKAVSATPTLAAGVNTPARRVVVRDWQRYDGTAGGMQ 377
Query: 297 FISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLR-FSSMMNAGPEPISSHMDP-PTL 354
+ + QM GRAGR GL GE+++L + + F + A PEP+ S + P L
Sbjct: 378 PLDVLEVHQMFGRAGRPGLDPYGEAVLLANSHDELEELFDRYVYADPEPVRSKLAAEPAL 437
Query: 355 VDLILEVVAANLCSSLEDVKTLIKHTLF 382
+L +A ++ + + + TL+
Sbjct: 438 RTHVLAAIATGFTTTEDGLHEFLGGTLY 465
>gi|294879127|ref|XP_002768575.1| dna polymerase theta, putative [Perkinsus marinus ATCC 50983]
gi|239871215|gb|EER01293.1| dna polymerase theta, putative [Perkinsus marinus ATCC 50983]
Length = 318
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 96/301 (31%), Positives = 154/301 (51%), Gaps = 16/301 (5%)
Query: 189 KIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALK--EENDGK-LSTNLEECILYGVAYH 245
++ACS L L + P + + L L+ N G L NL + +L G+A+H
Sbjct: 4 EVACSLLTKSLPWRSAPPPSQEVHHHRLQLRAELELCSCNTGTGLDKNLADGLLVGIAFH 63
Query: 246 HADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGRDFISLNMYKQ 305
H+ LT ER ++E Y +G + + CTSTLAAGVNLPAQRV+ R ++ +F+ Y+Q
Sbjct: 64 HSGLTTEERDIVERGYRSGAITCLACTSTLAAGVNLPAQRVVFRTPFIATEFLDTTRYRQ 123
Query: 306 MVGRAGRTGLQE-SGESIMLCKTMQDFLRFSSMMNAGPEPISSHM--DPPTLVDLILEVV 362
M GRAGR+G SGES ++C + R +SM A P+ S + + L L+LEV+
Sbjct: 124 MAGRAGRSGHSSASGESYVICSNEVEKRRVTSMAVATLPPLRSALGQNCVGLQRLLLEVM 183
Query: 363 AANLCSSLEDVKTLIKHTLF-YQLKSPEDQQTFLETTLSEIVA-----SLLASKGTMLTM 416
A + + L + T QL++P +++ + + A L S G M+
Sbjct: 184 ATAGQMRDDQIMRLARSTFLDRQLEAPGNEKKRRNSVADDFPAVHAGMKYLLSSG-MVYF 242
Query: 417 NEAGHLSL-TSIAKAAVQAGLSHDVCLIIYSDL--LHNKLNFCLLNSLHMLFLVIPLEYR 473
N L + T + +A +GLS + ++++ +L L N+ CL LH+++L P E
Sbjct: 243 NRDSQLYMATHLGRAVCASGLSCEAGIVLWEELKRLRNETGLCLEGDLHLVYLATPWEAS 302
Query: 474 I 474
+
Sbjct: 303 V 303
>gi|448732152|ref|ZP_21714434.1| ski2-like helicase [Halococcus salifodinae DSM 8989]
gi|445805064|gb|EMA55291.1| ski2-like helicase [Halococcus salifodinae DSM 8989]
Length = 756
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 170/662 (25%), Positives = 276/662 (41%), Gaps = 82/662 (12%)
Query: 15 EFKFYLEEYA---GVK-GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENR--IDEIGL 68
EF+ + EEY GV G Y L I + T EK + SL++ N ID++
Sbjct: 87 EFEAF-EEYGLSVGVSTGNYESDGEWLATCDIIVATSEK----VDSLVRNNAPWIDDLSC 141
Query: 69 IVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVENS 128
+V DE H++++ RGP LE ++K+ +Q+ A+SATIGN L+ +++
Sbjct: 142 VVSDEVHLVDDGHRGPTLEVTLAKLRQRNPGLQVVALSATIGNPEILAEWLDAELVDSTW 201
Query: 129 RPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDA--VLHLVQGNLMVLIFC 186
RP + V + + DG+ D G P A V + L+F
Sbjct: 202 RPIDLKKGVHYGQAIHLE-DGEQHELGVRD-------GEKPTAAIVRDTLDDGGSTLVFV 253
Query: 187 SSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHH 246
+S+ A RL + +++ D+ +++ +D + S +L + G A+HH
Sbjct: 254 NSRRNAEASARRLADTVESRLTDEERERLADVAAEIRDVSDTETSEDLASAVERGAAFHH 313
Query: 247 ADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYV------GRDFISL 300
A L + R L+E+A+ L+++ T TLAAGVN P++RV++RD G +S+
Sbjct: 314 AGLASDHRELVEDAFRERALKVVAATPTLAAGVNTPSRRVVVRDWRRYDGEAGGMKPLSV 373
Query: 301 NMYKQMVGRAGRTGLQESGESIMLCKTMQDFLR-FSSMMNAGPEPISSHMDP-PTLVDLI 358
QM GRAGR GL GES++L + + F + PEP+ S + P L +
Sbjct: 374 LEVHQMCGRAGRPGLDPYGESLLLANSHDELDELFDRYIWTEPEPVRSKLAAEPALRTHL 433
Query: 359 LEVVAANLCSSLEDVKTLIKHTLFYQLKSPEDQQTFLETTLSE-----IVASLLASKGTM 413
L VA+ SS + + TL+ + D+ LE + +V L G
Sbjct: 434 LATVASGFASSRSGLLEFLDRTLY---ATQTDESGRLERVTDDMLDYLVVNDFLDRDGEE 490
Query: 414 LTMNEAGH----LSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIP 469
L GH L L ++ A + GL +D + L L S
Sbjct: 491 LQATSLGHTVSRLYLDPMSAAEIVDGLR-------AADDRPSALGLFHLAS--------- 534
Query: 470 LEYRIPSDGILLSRSKVYDRYTKFHPQTLRVAEALGVTENLVALNVTGKLKDEKKALLCR 529
R P L RS + YT + R E LG +V + +D + L
Sbjct: 535 ---RTPDMYELYLRSGDSEEYTMLAHE--RETELLG--------SVPSEFEDRWEDWLSA 581
Query: 530 FFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELW--CYK 587
A +L D + + ++ YGI L+ ++ + S R EL W +
Sbjct: 582 LKTARMLEDWASELDEGEITDRYGIGPGDLRGKVDTAEWLLSAAERLAGELGLEWAPAVR 641
Query: 588 QLLTDLPQTLMYCRAPNLRALMDLPGVK-IG--RARQLLNAGYSSLELIARADAKEMVAK 644
+ T + + L+DL GV+ +G RAR+L G + + AD ++
Sbjct: 642 EARTRVQHGIQS-------ELIDLAGVRGVGRKRARRLFETGIETRADLRNADKPVVLGA 694
Query: 645 IR 646
+R
Sbjct: 695 LR 696
>gi|341582935|ref|YP_004763427.1| ski2-like helicase [Thermococcus sp. 4557]
gi|340810593|gb|AEK73750.1| ski2-like helicase [Thermococcus sp. 4557]
Length = 726
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 107/355 (30%), Positives = 175/355 (49%), Gaps = 31/355 (8%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLI--GSLI 58
+ EKY+ +E++ A G Y T L + + I T EK L+ GS
Sbjct: 80 LAEEKYREF----KEWEVLGLRVAATTGDYDSTDEWLGRYDVIIATAEKFDSLLRHGS-- 133
Query: 59 QENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTF 118
N I+++ L+V DE H++ RG LE ++S +L QI A+SAT+GN L+ +
Sbjct: 134 --NWIEDVKLVVADEVHLIGSYDRGATLEMILSHML---GKAQILALSATVGNAEELAEW 188
Query: 119 IEGITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQG 178
++ + + RP + + V ++F DGK + Y +N + SL + V+
Sbjct: 189 LDAALVMSDWRPVQLRKGVFHIGQLFWE-DGK--IDRYPENWE-SLA-------IDAVKR 237
Query: 179 NLMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECI 238
L+F +++ + AL L + K E L E + D + L+ +
Sbjct: 238 GKQALVFVNTRRSAEKEALSLSSKI---ARLLTKPETRQLDELVSSIEDNPTTEKLKRAL 294
Query: 239 LYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS--YVGRD 296
GVA+HHA L+ ER LIE+A+ + +++I T TLAAGVN PA RVIIRD+ Y G
Sbjct: 295 RGGVAFHHAGLSRTERTLIEDAFRSKLIKVIVATPTLAAGVNTPAFRVIIRDTKRYAGFG 354
Query: 297 FISLNMY--KQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHM 349
+ + + +QM+GRAGR + GE+I++ +T + ++ PE + S +
Sbjct: 355 WTDIPVLEIQQMMGRAGRPKYDKVGEAIIVARTEEPRKLMERYIHGKPEKLFSML 409
Score = 40.4 bits (93), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 54/122 (44%), Gaps = 6/122 (4%)
Query: 524 KALLCRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFAS---KVYRFCEEL 580
+ L + A +L D +N ++ + Y I L L + + ++YR E
Sbjct: 563 QGFLGQIKTAKVLLDWINEVPETRIYETYNIDPGDLYRILELADWLMYSLIELYRLFEPK 622
Query: 581 PELWCYKQLLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIARADAKE 640
++ Y L DL L + L L+ LP + RAR L NAG+ S E I RA ++
Sbjct: 623 EDVLDY---LRDLHLRLRHGVREELLELVRLPNIGRKRARALYNAGFRSQEDIMRAKVRD 679
Query: 641 MV 642
++
Sbjct: 680 LL 681
>gi|432328552|ref|YP_007246696.1| superfamily II helicase [Aciduliprofundum sp. MAR08-339]
gi|432135261|gb|AGB04530.1| superfamily II helicase [Aciduliprofundum sp. MAR08-339]
Length = 699
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 159/679 (23%), Positives = 295/679 (43%), Gaps = 87/679 (12%)
Query: 4 EKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRI 63
EKY+ L + F+ + A G Y L + I T EK ++ ++
Sbjct: 81 EKYEELKR----FERFGMRVALAIGDYDSPSGYLKHYDVVIATSEKMDSILRHDLEYAY- 135
Query: 64 DEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGIT 123
+G++++DE H++ EP RGP LE V+SK+ + QI A+SATI N +++++EG
Sbjct: 136 -NLGVVIVDEVHLMGEPTRGPTLEMVISKIRDVNDEAQIIALSATIKNSEEIASWLEGEH 194
Query: 124 YVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVL 183
RP V D + F+ + D ++ + V ++ VL
Sbjct: 195 VYSEFRPVPLKLGVYFDDTLL--FENGETINVPHDGINIG------NLVSRSIELGGQVL 246
Query: 184 IFCSSKIACSNLA--LRLQFDRFPGTKEYKKQEKEDLI---EALKEENDGKLSTNLEECI 238
IF + + + +LA LR + D++ K+++E L+ + L+EE L + I
Sbjct: 247 IFVNRRKSAESLAEKLRRRVDKY-----LSKEDREALMNISKELQEEEYTIYGERLTKMI 301
Query: 239 LYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRD--SYVGRD 296
+GV++HHA L+ +R +IE A+ L++I T TLAAG+NLP++ VI+RD Y G
Sbjct: 302 RHGVSFHHAGLSNRQRSVIERAFKGRWLKVIVATPTLAAGINLPSRTVIVRDVTRYDGFT 361
Query: 297 --FISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAG-PEPISSHMDPPT 353
+I + KQM+GRAGR + GE I+ ++ + G E I S +
Sbjct: 362 SVYIPVMEVKQMLGRAGRPKYDKYGEGIIYARSASRAKEYMETYILGETEDIESQLSNDA 421
Query: 354 LVDL-ILEVVAANLCSSLEDVKTLIKHTLFYQLKSPEDQQTFLETTLSEIVASLLASKGT 412
+ + +L ++A+++ + ++ T FY K P +L + ++
Sbjct: 422 ALRIHVLALIASDMVNKEGELFDFFSKT-FYGFKMP---VKYLNKKIEHVL--------N 469
Query: 413 MLTMNEAGHLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKL------NFCLLNSLHMLFL 466
L NE ++ + A D+ + Y+ + K FC+L+++
Sbjct: 470 FLEANE--FITRKRLILATPLGKRVSDLYIDPYTAIFFKKCYSKDYDEFCILHTIACTPD 527
Query: 467 VIPLEYRIPSDGILLSRSKVYDRYTKFHPQTLRVAEALGVTENLVALNVTGKLKDEKKAL 526
+IP+ + +S++ P+ L VA T +L + ++
Sbjct: 528 IIPIRAK---------KSEL--------PELLPVA----YTHDL----AIDEFDVDQDTF 562
Query: 527 LCRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELWCY 586
A ++ D N + ++ Y + + + +T + +Y F E+ + Y
Sbjct: 563 FGALKTALMIMDWTNEVSQDRLIGRYDVGPGDIHGRVEITDWL---LYAFA-EIGRVLKY 618
Query: 587 KQL--LTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIARADAKEMV-- 642
+ + L + Y L ++ L G+ RAR+L + G++S+E + +A ++
Sbjct: 619 PHVHQVEKLRLRVKYGVREELLPIVSLKGIGRVRARRLFDYGFNSIEKLRKAKVSQLTRI 678
Query: 643 ----AKIRHLPLRSARNLI 657
K+ H L+ AR I
Sbjct: 679 PGIGEKLAHEILKQARREI 697
>gi|448433822|ref|ZP_21586072.1| ski2-like helicase [Halorubrum tebenquichense DSM 14210]
gi|445686140|gb|ELZ38480.1| ski2-like helicase [Halorubrum tebenquichense DSM 14210]
Length = 816
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 112/398 (28%), Positives = 188/398 (47%), Gaps = 52/398 (13%)
Query: 15 EFKFYLEEY---AGVK-GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENR--IDEIGL 68
EF+ + EE+ GV G Y L + I + T EK + SLI+ ID++
Sbjct: 87 EFERW-EEFDVTVGVSTGNYDSDGEWLASRDIIVATSEK----VDSLIRNGAPWIDDLTC 141
Query: 69 IVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVENS 128
+V DE H++++ RGP LE ++K+ + +Q A+SAT+GN + ++ +++ +
Sbjct: 142 VVSDEVHLVDDSHRGPTLEVTLAKLRKVNPGLQTVALSATVGNADVIADWLDAELVESDW 201
Query: 129 RPTKHSEYVTVDKRVFQSFDGKSLTEI------------YADNLDYSLTGSGPDAVLHLV 176
RP + V + +FD S E+ D LD G G +
Sbjct: 202 RPIELHTGVHFGNAI--NFDDGSQREVPVERGEDQTAKLVGDALDTEEGGQGGSS----- 254
Query: 177 QGNLMVLIFCSSKIACSNLALRL---QFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTN 233
L+F +S+ + A +L R G + + DL E ++ +D S +
Sbjct: 255 ------LVFVNSRRNAESSARKLGEVTSSRLTGEE---RDRLRDLAEEIRGVSDTDTSED 305
Query: 234 LEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRD--- 290
L + + G A+HHA L + R L+E+A+ ++ + T TLAAGVN PA+RVI+RD
Sbjct: 306 LADAVEQGSAFHHAGLASEHRSLVEDAFRDRLIKCVSATPTLAAGVNTPARRVIVRDWRR 365
Query: 291 ---SYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCK--TMQDFLRFSSMMNAGPEPI 345
+ G + + QM GRAGR GL GE+++L Q+ L F + A EP+
Sbjct: 366 YDGEFGGMKPLDVLEVHQMCGRAGRPGLDPYGEAVLLANDADTQEEL-FERYVWAEAEPV 424
Query: 346 SSHMDP-PTLVDLILEVVAANLCSSLEDVKTLIKHTLF 382
S + P L +L +A+ ++ E + + + +TL+
Sbjct: 425 RSKLAAEPALRTHVLATIASGFAATREGLLSFLDNTLY 462
>gi|110667590|ref|YP_657401.1| ATP-dependent DNA helicase [Haloquadratum walsbyi DSM 16790]
gi|109625337|emb|CAJ51759.1| ATP-dependent DNA helicase Hel308 [Haloquadratum walsbyi DSM 16790]
Length = 696
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 111/420 (26%), Positives = 187/420 (44%), Gaps = 58/420 (13%)
Query: 28 GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE--NRIDEIGLIVIDEFHMLNEPQRGPI 85
G + + L + + T EK + S I+ + +D++ +V+DE H+L RGP
Sbjct: 120 GDFDAAENDLETADVVVATAEK----VDSAIRNGASWVDKLACVVVDEVHLLGSANRGPT 175
Query: 86 LECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVENSRPT--KHSEYVTVDKRV 143
LE ++ + +Q+ A+SATI N ++++++ RP + Y D+ V
Sbjct: 176 LEITLATIQRRASGVQVVALSATIDNPEEVASWLDAELVSSTWRPVSLRTGVYDASDETV 235
Query: 144 FQSFDGKSLTEIYADN------------LDYSLTGSGPDAVLHLVQGNLM----VLIFCS 187
FD + I AD+ D + T + A + LV ++ L F
Sbjct: 236 I--FDDGNRLPITADSDSPPETATDLTESDDTSTDADTKATISLVADAVISGGQCLAFVR 293
Query: 188 SKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHA 247
S+ ++LA +L F E L E +++ L + + GVA+HHA
Sbjct: 294 SRQEAASLAKQLADVGFGANPE--------LAEDIRDIGTTPTGKQLADAVTAGVAFHHA 345
Query: 248 DLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRD--SYVGRDFISLNMYK- 304
L + R LIE A+ L++IC T TLAAGVN+PA+RV++RD Y G L + +
Sbjct: 346 GLRSDHRILIESAFRNRDLRVICATPTLAAGVNVPARRVVVRDLKRYTGEKMAWLPVLEV 405
Query: 305 -QMVGRAGRTGLQESGESIMLC-------------------KTMQDFLRFSSMMNAGPEP 344
QM GRAGR L GE++++ K+++ R+ ++AGPE
Sbjct: 406 HQMCGRAGRPHLDPYGEAVLIGDITNKIDSSDAQTSADGEQKSIRTESRWRRYVDAGPES 465
Query: 345 ISSHMDP-PTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQLKSPEDQQTFLETTLSEIV 403
I S + L +L ++ A S V ++ T F S D ++ ++E++
Sbjct: 466 IESQLTARNALRTHVLALIVAGFADSKNQVLDVLDSTFFAHQSSTADLTAVIDDVVAELI 525
>gi|385803030|ref|YP_005839430.1| ATP-dependent DNA helicase Hel308 [Haloquadratum walsbyi C23]
gi|339728522|emb|CCC39675.1| ATP-dependent DNA helicase Hel308 [Haloquadratum walsbyi C23]
Length = 696
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 111/420 (26%), Positives = 187/420 (44%), Gaps = 58/420 (13%)
Query: 28 GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE--NRIDEIGLIVIDEFHMLNEPQRGPI 85
G + + L + + T EK + S I+ + +D++ +V+DE H+L RGP
Sbjct: 120 GDFDAAENDLETADVVVATAEK----VDSAIRNGASWVDKLACVVVDEVHLLGSANRGPT 175
Query: 86 LECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVENSRPT--KHSEYVTVDKRV 143
LE ++ + +Q+ A+SATI N ++++++ RP + Y D+ V
Sbjct: 176 LEITLATIQRRASGVQVVALSATIDNPEEVASWLDAELVSSTWRPVSLRTGVYDASDETV 235
Query: 144 FQSFDGKSLTEIYADN------------LDYSLTGSGPDAVLHLVQGNLM----VLIFCS 187
FD + I AD+ D + T + A + LV ++ L F
Sbjct: 236 I--FDDGNRLPITADSDSPPETATDLTESDDTSTDADTKATISLVADAVISGGQCLAFVR 293
Query: 188 SKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHA 247
S+ ++LA +L F E L E +++ L + + GVA+HHA
Sbjct: 294 SRQEAASLAKQLADVGFGANPE--------LAEDIRDIGTTPTGKQLADAVTAGVAFHHA 345
Query: 248 DLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRD--SYVGRDFISLNMYK- 304
L + R LIE A+ L++IC T TLAAGVN+PA+RV++RD Y G L + +
Sbjct: 346 GLRSDHRILIESAFRNRDLRVICATPTLAAGVNVPARRVVVRDLKRYTGEKMAWLPVLEV 405
Query: 305 -QMVGRAGRTGLQESGESIMLC-------------------KTMQDFLRFSSMMNAGPEP 344
QM GRAGR L GE++++ K+++ R+ ++AGPE
Sbjct: 406 HQMCGRAGRPHLDPYGEAVLIGDITNKIDSSDAQTSADGEQKSIRTESRWRRYVDAGPES 465
Query: 345 ISSHMDP-PTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQLKSPEDQQTFLETTLSEIV 403
I S + L +L ++ A S V ++ T F S D ++ ++E++
Sbjct: 466 IESQLTARNALRTHVLALIVAGFADSKNQVLDVLDSTFFAHQSSTADLTAVIDDVVAELI 525
>gi|448473555|ref|ZP_21601697.1| DEAD/DEAH box helicase [Halorubrum aidingense JCM 13560]
gi|445819067|gb|EMA68916.1| DEAD/DEAH box helicase [Halorubrum aidingense JCM 13560]
Length = 662
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 106/381 (27%), Positives = 171/381 (44%), Gaps = 34/381 (8%)
Query: 28 GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE--NRIDEIGLIVIDEFHMLNEPQRGPI 85
G + T L + + T EK + S I+ + +DE+ +V+DE H+L +RGP
Sbjct: 97 GDFDATGESLAGNDVIVATAEK----VDSAIRNGASWVDELACVVVDEVHLLGAERRGPT 152
Query: 86 LECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQ 145
LE ++ + +Q+ A+SAT+ N A++ +++ + RP V V V
Sbjct: 153 LEVTLATLRRRNPDVQVIALSATVDNPEAIAEWLDAALVESDWRPVDLRTGVAVGDEV-- 210
Query: 146 SFDGKSLTEI----------YADNLDYSLTGS-GPDA-------VLHLVQGNLMVLIFCS 187
SFD ++T I S T S GPDA V + L F
Sbjct: 211 SFDDGTVTTIDVHASAGGDDADGTDGASDTDSDGPDATEVTAALVADAIADGGQCLAFVR 270
Query: 188 SKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLS-TNLEECILYGVAYHH 246
S+ LA RL D ++ + DG L+ + L +C+ GVA+HH
Sbjct: 271 SRTEAVALAERLATDEL--AEKMGIEAASSAAADEAAAIDGTLTGSQLADCLRSGVAFHH 328
Query: 247 ADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS--YVGR--DFISLNM 302
A L +G R ++E ++ + IC T TLAAG+N+PA+RV++RD Y G +++
Sbjct: 329 AGLRSGHRAVVESSFREREVACICATPTLAAGINVPARRVVVRDQKRYAGSAMEWLPTLE 388
Query: 303 YKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHM-DPPTLVDLILEV 361
QM GRAGR GL GE++++ + PE + S + DP L +L
Sbjct: 389 VHQMCGRAGRPGLDPRGEAVLVGDEDVRAELVERYVEGEPEAVESKLADPSALRTHVLSA 448
Query: 362 VAANLCSSLEDVKTLIKHTLF 382
VA + ++ + + T +
Sbjct: 449 VATGSAETEAEILGVFEGTFY 469
>gi|448582917|ref|ZP_21646396.1| ski2-like helicase [Haloferax gibbonsii ATCC 33959]
gi|445730371|gb|ELZ81960.1| ski2-like helicase [Haloferax gibbonsii ATCC 33959]
Length = 826
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 119/396 (30%), Positives = 193/396 (48%), Gaps = 33/396 (8%)
Query: 15 EFKFYLEEYA---GVK-GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENR--IDEIGL 68
EF+ + EEY GV G Y L+ + I + T EK + SL++ N +D++
Sbjct: 87 EFERW-EEYGIDVGVSTGNYESDGEWLSSRDIIVATSEK----VDSLVRNNAAWMDQLTC 141
Query: 69 IVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVENS 128
+V DE H++++ RGP LE ++K+ L ++Q+ A+SAT+GN ++ +++ +
Sbjct: 142 VVADEVHLVDDRHRGPTLEVTLAKLRRLNPNLQVVALSATVGNAGVVADWLDAELVKSDW 201
Query: 129 RPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNL-MVLIFCS 187
RP V V SF S E+ + DA+ G+ L+F +
Sbjct: 202 RPIDLKMGVHYGNAV--SFADGSQREVPVGRGERQTPALVADALEGDGDGDQGSSLVFVN 259
Query: 188 SKIACSNLALRLQFDRFPGTKEY-KKQEKEDLIE---ALKEENDGKLSTNLEECILYGVA 243
S+ + A R+ T+ Y E+ DL E +++ +D + S +L + G A
Sbjct: 260 SRRNAESAARRMA----DVTERYITGDERGDLAELAAEIRDVSDTETSEDLAAAVAKGAA 315
Query: 244 YHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRD------SYVGRDF 297
+HHA L A R L+E+A+ ++ IC T TLAAGVN P++RV++RD Y G
Sbjct: 316 FHHAGLAAEHRTLVEDAFRDRLIKCICATPTLAAGVNTPSRRVVVRDWQRYDGDYGGMKP 375
Query: 298 ISLNMYKQMVGRAGRTGLQESGESIMLCK--TMQDFLRFSSMMNAGPEPISSHMDP-PTL 354
+ + QM+GRAGR GL GE+++L K +D L F + A E + S + P L
Sbjct: 376 LDVLEVHQMMGRAGRPGLDPYGEAVLLAKDADARDEL-FERYIWADAEDVRSKLAAEPAL 434
Query: 355 VDLILEVVAANLCSSLEDVKTLIKHTLF-YQLKSPE 389
+L VA+ + E + + TL+ Q PE
Sbjct: 435 RTHLLATVASGFAHTREGLLEFLDQTLYATQTDDPE 470
>gi|433421193|ref|ZP_20405733.1| ski2-like helicase [Haloferax sp. BAB2207]
gi|432198928|gb|ELK55157.1| ski2-like helicase [Haloferax sp. BAB2207]
Length = 692
Score = 136 bits (343), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 103/342 (30%), Positives = 169/342 (49%), Gaps = 22/342 (6%)
Query: 63 IDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGI 122
+D++ +V DE H++++ RGP LE ++K+ L ++Q+ A+SAT+GN +S +++
Sbjct: 1 MDQLTCVVADEVHLVDDRHRGPTLEVTLAKLRRLNTNLQVVALSATVGNAGVVSDWLDAE 60
Query: 123 TYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNL-M 181
+ RP V V SF S E+ + DA+ +G+
Sbjct: 61 LVKSDWRPIDLKMGVHYGNAV--SFADGSQREVPVGRGERQTPALVADALEGDGEGDQGS 118
Query: 182 VLIFCSSKIACSNLALRLQFDRFPGTKEY-KKQEKEDLIE---ALKEENDGKLSTNLEEC 237
L+F +S+ + A R+ T+ Y E+ DL E +++ +D + S +L
Sbjct: 119 SLVFVNSRRNAESAARRMA----DVTERYLTGDERSDLAELAAEIRDVSDTETSDDLANA 174
Query: 238 ILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRD------S 291
+ G A+HHA L A R L+E+A+ ++ IC T TLAAGVN P++RV++RD
Sbjct: 175 VAKGAAFHHAGLAAEHRTLVEDAFRDRLIKCICATPTLAAGVNTPSRRVVVRDWQRYDGD 234
Query: 292 YVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCK--TMQDFLRFSSMMNAGPEPISSHM 349
Y G + + QM+GRAGR GL GE+++L K +D L F + A E + S +
Sbjct: 235 YGGMKPLDVLEVHQMMGRAGRPGLDPYGEAVLLAKDADARDEL-FERYIWADAEDVRSKL 293
Query: 350 DP-PTLVDLILEVVAANLCSSLEDVKTLIKHTLF-YQLKSPE 389
P L +L VA+ + E + + TL+ Q PE
Sbjct: 294 AAEPALRTHLLATVASGFAHTREGLLEFLDQTLYATQTDDPE 335
>gi|346979391|gb|EGY22843.1| polymerase [Verticillium dahliae VdLs.17]
Length = 916
Score = 136 bits (343), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 155/645 (24%), Positives = 269/645 (41%), Gaps = 103/645 (15%)
Query: 42 IYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQ 101
I +CTIEK + +I + I + I + ++V+DE HM+++ RG ++E + +K++ L + +Q
Sbjct: 296 IGVCTIEKANAMINTAIDDCSIKHLRIVVLDELHMIDDDHRGYLMELMATKLISLPQPMQ 355
Query: 102 IFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYAD--- 158
+ MSAT+ NI LST++EG +Y RP E++ + V+ + L + +
Sbjct: 356 VIGMSATLSNIRLLSTWLEGHSYETKYRPVPVEEHLVYESHVYPAATTSELLKTASQLKN 415
Query: 159 -------------NLDYSLTGSGPDAVLHLV--------QGNLMVLIFCSSKIACSNLAL 197
++ S+ D V++ V + L+F S+ AC A
Sbjct: 416 VSQPTQSEAMAIRRIEPSVHRELKDPVVNSVVALAAETARAGYGALVFAGSRGACETDA- 474
Query: 198 RLQFDRFPGTKEYKK---QEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGER 254
+L P +E ++ L+ L+ + G L LEE I GVA+H LT ER
Sbjct: 475 KLIARVLPQQEEVGSTIFDKRVGLLAELRSLSTG-LDAALEETIPSGVAFHR--LTTEER 531
Query: 255 RLIEEAYLAGTLQIICCTSTLAAGVNLP---AQRVIIRDSYVGRDFISLNMYKQMVGRAG 311
LI AY G L++ T +LAAG+NL Q V + S + + LN KQ + RA
Sbjct: 532 ELIANAYDNGILKVCVATCSLAAGINLKDDLEQVVDLMHSEMPQLTSGLNSDKQRIQRA- 590
Query: 312 RTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAANLCSSLE 371
+LEV+A L +S +
Sbjct: 591 ----------------------------------------------LLEVIAIRLATSRD 604
Query: 372 DVKTLIKHTLFYQLKSPEDQQTFLETTLSEIVASLLASKGTMLTMNEAGHLSLTSIAKAA 431
+ TL P + ++++L +++ + ++ T + KA
Sbjct: 605 SIDDYAAKTLLACTGDPALVRKCVQSSLDNLLSL------NFVEVDGLDGFRPTQLGKAI 658
Query: 432 VQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEYRIPSDGILLSRSKVYDRYT 491
V + L D I+ +L F + +H+L++ P++ S + R+++
Sbjct: 659 VASALDPDDGTFIHKELQRALKAFVMDGEMHILYMFTPVQDYGTSINWQVFRNEMEALDD 718
Query: 492 KFHPQTLRVAEALGVTENLV-ALNVTGKLK----DEKKALLC--RFFHACILYDVLNFDN 544
H RV LG+ ++ L G LK +E+ + RF+ A L D+ N
Sbjct: 719 SGH----RVLGFLGLKRAVINRLAQGGVLKGSTPEEQDVIRVHRRFYMALQLRDLCNEMP 774
Query: 545 HQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELWCYKQLLTD-LPQTLMYCRAP 603
VA+ Y + +Q + FA+ + +FCE++ W D L
Sbjct: 775 IHVVARKYDVHRGAVQTLSQTCTGFAAGMIKFCEQMG--WGIMSAALDHFSDRLRAGARA 832
Query: 604 NLRALMDLPGVKIGRARQLLNAGYSSLELIARADAKEMV--AKIR 646
+L AL + +K AR +GY S+ +A AD +E+ +K+R
Sbjct: 833 DLLALAKITFIKSRTARIFWESGYRSIAAVANADPRELAQPSKVR 877
>gi|255075777|ref|XP_002501563.1| DEAD/DEAH box helicase [Micromonas sp. RCC299]
gi|226516827|gb|ACO62821.1| DEAD/DEAH box helicase [Micromonas sp. RCC299]
Length = 1026
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 109/333 (32%), Positives = 164/333 (49%), Gaps = 54/333 (16%)
Query: 42 IYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKK--- 98
+ + TIEK S I L +E R+ E+ +V+DE H++ E RG +LE +++K+ + +
Sbjct: 246 VAVTTIEKASVTISRLAEEGRLGELCAVVVDELHLVGEEGRGGVLESMLAKLRFADRRGA 305
Query: 99 ------SIQIFAMSATIG--NINALSTFIEGITYVENSRPTKHSEYVTVDKR--VFQSFD 148
QI AMSAT+ ++ L+ +++ ++ N RP + E+V V+ R VF
Sbjct: 306 FGETGGGPQIVAMSATVSHESLERLAGWLDARLFITNYRPVELKEHV-VNHRGEVFLKRA 364
Query: 149 GKSLTEIYADNLDYSLTGSGP-------------DAVLHLVQ------------GNLMV- 182
+ D + L GP D LHLV+ G L
Sbjct: 365 ARGKIRGKDDKENDGLGKRGPPGPFEGLFEKKERDVPLHLVRATEIKSGADQTAGALAAE 424
Query: 183 --------LIFCSSKIACSNLALRLQ--FDR-FPGTKEYKKQEKEDLIEALKEENDGKLS 231
LIFC S+ LA++L F+ P + ++ L AL +G
Sbjct: 425 TAVRGHSCLIFCPSRKRTRTLAVQLARAFETTMPSPRREVASARDGLARALAYAAEGAPD 484
Query: 232 TNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS 291
+L EC GVAYHHA L+ E+ L+E+A+ GTL + CT+TLAAGVNLPA+RV+I +
Sbjct: 485 RDLVECCRRGVAYHHAHLSKREKDLVEDAFRRGTLHTLTCTTTLAAGVNLPARRVVILEG 544
Query: 292 YVGRDFISLNMYKQMVGRAGRTGLQESGESIML 324
G S + Y+QM GRAGR G + GES ++
Sbjct: 545 NYGN---SASTYRQMAGRAGRAGQSDEGESFVI 574
>gi|448536378|ref|ZP_21622498.1| ski2-like helicase [Halorubrum hochstenium ATCC 700873]
gi|445702489|gb|ELZ54438.1| ski2-like helicase [Halorubrum hochstenium ATCC 700873]
Length = 817
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 113/398 (28%), Positives = 189/398 (47%), Gaps = 52/398 (13%)
Query: 15 EFKFYLEEY---AGVK-GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENR--IDEIGL 68
EF+ + EE+ GV G Y L + I + T EK + SLI+ ID++
Sbjct: 87 EFERW-EEFDVTVGVSTGNYDSDGEWLASRDIIVATSEK----VDSLIRNGAPWIDDLTC 141
Query: 69 IVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVENS 128
+V DE H++++ RGP LE ++K+ + +Q A+SAT+GN + ++ +++ +
Sbjct: 142 VVSDEVHLVDDSHRGPTLEVTLAKLRKVNPGLQTVALSATVGNADVIADWLDAELVESDW 201
Query: 129 RPTKHSEYVTVDKRVFQSFDGKS------------LTEIYADNLDYSLTGSGPDAVLHLV 176
RP + V + +FD S E+ D LD G G +
Sbjct: 202 RPIELHTGVHFGNAI--NFDDGSQREVPVERGEDQTAELVGDALDTEEGGQGGSS----- 254
Query: 177 QGNLMVLIFCSSKIACSNLALRL---QFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTN 233
L+F +S+ + A +L R G + + +E L E ++ +D S +
Sbjct: 255 ------LVFVNSRRNAESSARKLGEVTSSRLTGEERDRLRE---LAEEIRGVSDTDTSED 305
Query: 234 LEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRD--- 290
L + + G A+HHA L + R LIE+A+ ++ + T TLAAGVN PA+RVI+RD
Sbjct: 306 LADAVEQGSAFHHAGLASEHRSLIEDAFRDRLIKCVSATPTLAAGVNTPARRVIVRDWRR 365
Query: 291 ---SYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCK--TMQDFLRFSSMMNAGPEPI 345
+ G + + QM GRAGR GL GE+++L Q+ L F + A EP+
Sbjct: 366 YDGEFGGMKPLDVLEVHQMCGRAGRPGLDPYGEAVLLANDADTQEEL-FERYVWAEAEPV 424
Query: 346 SSHMDP-PTLVDLILEVVAANLCSSLEDVKTLIKHTLF 382
S + P L +L +A+ ++ E + + + +TL+
Sbjct: 425 RSKLAAEPALRTHVLATIASGFAATREGLLSFLDNTLY 462
>gi|448494842|ref|ZP_21609657.1| ski2-like helicase [Halorubrum californiensis DSM 19288]
gi|445689065|gb|ELZ41311.1| ski2-like helicase [Halorubrum californiensis DSM 19288]
Length = 824
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 112/397 (28%), Positives = 186/397 (46%), Gaps = 50/397 (12%)
Query: 15 EFKFYLEEYA---GVK-GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENR--IDEIGL 68
EF+ + EE+ GV G Y L + I + T EK + SLI+ ID++
Sbjct: 87 EFERW-EEFGVTVGVSTGNYDSDGEWLASRDIIVATSEK----VDSLIRNGAPWIDDLTC 141
Query: 69 IVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVENS 128
+V DE H++++ RGP LE ++K+ + +Q A+SAT+GN + ++ ++ +
Sbjct: 142 VVSDEVHLVDDSHRGPTLEVTLAKLRKVNPGLQTVALSATVGNADVIAEWLNAELVESDW 201
Query: 129 RPTKHSEYVTVDKRVFQSFDGKSLTEI------------YADNLDYSLTGSGPDAVLHLV 176
RP + V + +FD S E+ AD LD G G +
Sbjct: 202 RPIELHTGVHFGNAI--NFDDGSQREVPVERGEDQTARLVADALDTEEDGQGGSS----- 254
Query: 177 QGNLMVLIFCSSKIACSNLALRL---QFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTN 233
L+F +S+ + A +L R G + +E L E ++ +D S +
Sbjct: 255 ------LVFVNSRRNAESSARKLGEVTASRLTGDDRDRLRE---LAEEIRGVSDTDTSED 305
Query: 234 LEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRD--- 290
L + + G A+HHA L + R LIE+A+ ++ + T TLAAGVN PA+RVI+RD
Sbjct: 306 LADAVEQGSAFHHAGLASEHRSLIEDAFRDRLIKCVSATPTLAAGVNTPARRVIVRDWRR 365
Query: 291 ---SYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLR-FSSMMNAGPEPIS 346
+ G + + QM GRAGR GL GE+++L + F + A EP+
Sbjct: 366 YDGEFGGMQPLDVLEVHQMCGRAGRPGLDPYGEAVLLANSADTREELFERYVWAEAEPVR 425
Query: 347 SHMDP-PTLVDLILEVVAANLCSSLEDVKTLIKHTLF 382
S + P L +L VA+ ++ + + + + +TL+
Sbjct: 426 SKLAAEPALRTHVLATVASGFAATRDGLLSFLDNTLY 462
>gi|335433782|ref|ZP_08558598.1| ski2-like helicase [Halorhabdus tiamatea SARL4B]
gi|334898420|gb|EGM36528.1| ski2-like helicase [Halorhabdus tiamatea SARL4B]
Length = 822
Score = 136 bits (342), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 118/427 (27%), Positives = 206/427 (48%), Gaps = 25/427 (5%)
Query: 14 EEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENR--IDEIGLIVI 71
E+F+ Y E G Y L K + + T EK + SL++ + ID++ +V
Sbjct: 106 EQFEAYGLEVGVSTGNYESDGGWLADKDVVVATSEK----VDSLVRNDAPWIDDLDCVVA 161
Query: 72 DEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVENSRPT 131
DE H++++ +RGP LE ++K+ +Q A+SATIGN AL+ +++ RP
Sbjct: 162 DEVHLVDDGERGPTLEVTLAKLRKRNPDLQTVALSATIGNAEALAEWLDAELVDSTWRPI 221
Query: 132 KHSEYVTVDKRV-FQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKI 190
+ V + + + + K L ++ ++ V ++ + L+F +S+
Sbjct: 222 DLKKGVHYGQALHLEDGNQKRLPVRDSEKQTAAI-------VRDTLEDDGSTLVFVNSRR 274
Query: 191 ACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLT 250
A RL P ++ ++ +++ +D + S +L E + G A+HHA L+
Sbjct: 275 NAEAAARRLASTTDPHLDGEERDRLAEIAAEIRDVSDTETSDDLAEAVEQGAAFHHAGLS 334
Query: 251 AGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIR------DSYVGRDFISLNMYK 304
R L+E+A+ +++I T TLAAGVN P++RV++R + G +S+
Sbjct: 335 REHRSLVEDAFQERLVKVISATPTLAAGVNTPSRRVVVRDWRRYDGTAGGMQPLSVLEVH 394
Query: 305 QMVGRAGRTGLQESGESIMLCKTMQDFLR-FSSMMNAGPEPISSHMDP-PTLVDLILEVV 362
QM+GRAGR GL GE+++L + F + A PEP+ S + P L IL V
Sbjct: 395 QMMGRAGRPGLDPYGEALLLASNHDELDELFERYVWADPEPVQSKLAAEPALRTHILSTV 454
Query: 363 AANLCSSLEDVKTLIKHTLFYQLKSPEDQQTFLETTLSEIVASLLASKGTMLTMNEAGHL 422
A+ +S E + ++ TL+ + + LET + E++A L A+ +E G L
Sbjct: 455 ASGFANSREGLLDFLEATLYASQTT---EGGRLETVVDEVIAYLAANDFLTRADDEEGTL 511
Query: 423 SLTSIAK 429
TSI +
Sbjct: 512 RATSIGQ 518
>gi|386876475|ref|ZP_10118586.1| DEAD/DEAH box helicase [Candidatus Nitrosopumilus salaria BD31]
gi|386805682|gb|EIJ65190.1| DEAD/DEAH box helicase [Candidatus Nitrosopumilus salaria BD31]
Length = 708
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 111/349 (31%), Positives = 179/349 (51%), Gaps = 24/349 (6%)
Query: 28 GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILE 87
G + ++ L ++ I T EK +I I+ ++EIGL++ DE H++ + RGP LE
Sbjct: 107 GDFENIEKNLETSNVLILTNEKMDSIIRHGIE--WVEEIGLVISDEVHLIGDESRGPTLE 164
Query: 88 CVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVENS-RPTKHSEYVTVDKRVFQS 146
+++++ L QI +SATI N + ++ ++ G T V+N RP SE V V +
Sbjct: 165 MILTQLKLLDTKPQIVGLSATIMNSDEIADWL-GCTLVKNDWRPVPLSEGVCDGGEVTMN 223
Query: 147 FDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRLQ--FDRF 204
DGK+ ++ SL G+ D + V+ L+F ++ +LA +
Sbjct: 224 -DGKTF------EVERSLRGTPIDLGIQSVKEGGQSLVFAETRTRSKSLATKAADAIAEI 276
Query: 205 PGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAG 264
KE + EK + L E +L L + GVA+HHA L R +IE + G
Sbjct: 277 LEKKELTELEKTSK-KILSENEHTELVKTLSLLVKKGVAFHHAGLNQKCREIIETEFRKG 335
Query: 265 TLQIICCTSTLAAGVNLPAQRVIIR-----DSYVGRDF-ISLNMYKQMVGRAGRTGLQES 318
T++++ T TLAAGVNLPA+RV+I ++ VG + IS+ YKQ+ GRAGR +
Sbjct: 336 TIKLLSSTPTLAAGVNLPARRVVISNINRYNAKVGANRPISVLEYKQLCGRAGRPQYDDY 395
Query: 319 GESIMLCK-TMQDFLRFSSMMNAGPEPISSHM-DPPTLVDLILEVVAAN 365
GESI++ ++ + + +N PEPI S + D +L IL V+ +
Sbjct: 396 GESIIVGNGNTKELIEY--YINGEPEPIISKITDDKSLRTHILSVIVTH 442
>gi|84488930|ref|YP_447162.1| helicase [Methanosphaera stadtmanae DSM 3091]
gi|84372249|gb|ABC56519.1| predicted helicase [Methanosphaera stadtmanae DSM 3091]
Length = 694
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 115/423 (27%), Positives = 203/423 (47%), Gaps = 53/423 (12%)
Query: 3 HEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENR 62
+EKY+ EFK + EE+ G++P ++ I + E L + N
Sbjct: 80 NEKYK-------EFKVF-EEFGFKVGKHP------SRCDIAVMVFESFDAL--TRFSRNT 123
Query: 63 IDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGI 122
++EI L++IDEFHM+ + RGP LEC ++++ KS++I A+SAT+ N+ +S +++
Sbjct: 124 LNEIDLVIIDEFHMIGDYSRGPTLECAITRLKENNKSMRIIALSATLKNMEEISHWLDAN 183
Query: 123 TYVENSRPTK-HSEYVTVDKRVFQSFDGKSLT-EIYADNLDYSLTGSGPDAVLHLVQGNL 180
V + RP H E + ++ F + D ++ +I D+L+ S
Sbjct: 184 VVVHDYRPVPLHKEVLCAEE--FGTSDKNNIVFKILNDSLNDS----------------S 225
Query: 181 MVLIFCSSKIACSNLALRLQ---FDRFP-GTKEYKKQEKEDLIEALKEEND--GKLSTNL 234
+L F S++ +LA + P G KE ED++ ++N ++ L
Sbjct: 226 QMLTFVSTRRFTESLAQNMSKKIAKHIPDGKKEIFNSIAEDVLNVSIKKNSQPTEVCYKL 285
Query: 235 EECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRD---- 290
ECI G+A+HHA L ++ +IEE ++ G L +I T +L GVNLP++ V+IRD
Sbjct: 286 AECIRNGIAFHHAGLFDKQKEIIEEEFINGNLLMITATPSLMYGVNLPSKNVVIRDYTRW 345
Query: 291 SYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHM- 349
+ G+ I + Y+QM GRAGR G G S +L KT + G +++
Sbjct: 346 TEQGQTNIPVFDYEQMSGRAGRPGFDTEGYSYLLAKTYDEAFNLDEYYVHGDIEVTNSKL 405
Query: 350 --DPPTLVDLILEVVAANLCSSLEDVKTLIKHTLF-YQLKSPEDQQTF---LETTLSEIV 403
+ ++ I+ +++ ++D+ T + +Q+ + +F ET EI
Sbjct: 406 IDNEDAVLKQIITQISSGFAKDMDDLIDFFNKTFYGFQISHTYNDMSFGFSGETIKYEIS 465
Query: 404 ASL 406
++L
Sbjct: 466 SAL 468
>gi|448483258|ref|ZP_21605708.1| ski2-like helicase [Halorubrum arcis JCM 13916]
gi|445820780|gb|EMA70583.1| ski2-like helicase [Halorubrum arcis JCM 13916]
Length = 818
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 109/394 (27%), Positives = 185/394 (46%), Gaps = 44/394 (11%)
Query: 15 EFKFYLEEYA---GVK-GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENR--IDEIGL 68
EF+ + EE+ GV G Y L + I + T EK + SLI+ ID++
Sbjct: 87 EFERW-EEFGVTVGVSTGNYDSDGEWLVSRDIIVATSEK----VDSLIRNGAPWIDDLTC 141
Query: 69 IVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVENS 128
+V DE H++++ RGP LE ++K+ + +Q A+SAT+GN + ++ +++ +
Sbjct: 142 VVSDEVHLVDDSHRGPTLEVTLAKLRKVNPGLQTVALSATVGNADVIADWLDAELVESDW 201
Query: 129 RPTKHSEYVTVDKRVFQSFDGKSLTEI------------YADNLDYSLTGSGPDAVLHLV 176
RP + V + +FD S E+ AD LD G G +
Sbjct: 202 RPIELRTGVHFGNAI--NFDDGSQREVPVERGEDQTAKLVADALDTEEDGQGGSS----- 254
Query: 177 QGNLMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEE 236
L+F +S+ + +L P ++ +L E ++ +D S +L +
Sbjct: 255 ------LVFVNSRRNAESSTRKLGEVTAPRLTGDERDRLRELAEEIRGVSDTDTSEDLAD 308
Query: 237 CILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRD------ 290
+ G A+HHA L + R LIE+A+ ++ + T TLAAGVN PA+RVI+RD
Sbjct: 309 AVEQGSAFHHAGLASEHRSLIEDAFRDRLIKSVSATPTLAAGVNTPARRVIVRDWRRYDG 368
Query: 291 SYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLR-FSSMMNAGPEPISSHM 349
+ G + + QM GRAGR GL GE+++L + F + A EP+ S +
Sbjct: 369 EFGGMQPLDVLEIHQMCGRAGRPGLDPYGEAVLLANSADTREELFDRYVWAEAEPVRSKL 428
Query: 350 DP-PTLVDLILEVVAANLCSSLEDVKTLIKHTLF 382
P L +L VA+ ++ + + + + +TL+
Sbjct: 429 AAEPALRTHVLATVASGFAATRDGLLSFLDNTLY 462
>gi|448560406|ref|ZP_21633854.1| ski2-like helicase [Haloferax prahovense DSM 18310]
gi|445722056|gb|ELZ73719.1| ski2-like helicase [Haloferax prahovense DSM 18310]
Length = 824
Score = 135 bits (341), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 118/396 (29%), Positives = 193/396 (48%), Gaps = 33/396 (8%)
Query: 15 EFKFYLEEYA---GVK-GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQEN--RIDEIGL 68
EF+ + EEY GV G Y L+ + I + T EK + SL++ N +D++
Sbjct: 87 EFERW-EEYGIDVGVSTGNYESDGEWLSSRDIIVATSEK----VDSLVRNNAAWMDQLTC 141
Query: 69 IVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVENS 128
+V DE H++++ RGP LE ++K+ L ++Q+ A+SAT+GN ++ +++ +
Sbjct: 142 VVADEVHLVDDRHRGPTLEVTLAKLRRLNPNLQVVALSATVGNAGVVADWLDAELVKSDW 201
Query: 129 RPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNL-MVLIFCS 187
RP V + SF S E+ + DA+ G+ L+F +
Sbjct: 202 RPIDLKMGVHYGNAI--SFADGSQREVPVGRGERQTPALVADALEGDGDGDQGSSLVFVN 259
Query: 188 SKIACSNLALRLQFDRFPGTKEY-KKQEKEDLIE---ALKEENDGKLSTNLEECILYGVA 243
S+ + A R+ T+ Y E+ DL E +++ +D + S +L + G A
Sbjct: 260 SRRNAESAARRMA----DVTERYITGDERGDLAELAAEIRDVSDTETSEDLAAAVAKGAA 315
Query: 244 YHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRD------SYVGRDF 297
+HHA L A R L+E+A+ ++ IC T TLAAGVN P++RV++RD Y G
Sbjct: 316 FHHAGLAAEHRTLVEDAFRDRLIKCICATPTLAAGVNTPSRRVVVRDWQRYDGDYGGMKP 375
Query: 298 ISLNMYKQMVGRAGRTGLQESGESIMLCK--TMQDFLRFSSMMNAGPEPISSHMDP-PTL 354
+ + QM+GRAGR GL GE+++L K +D L F + A E + S + P L
Sbjct: 376 LDVLEVHQMMGRAGRPGLDPYGEAVLLAKDADARDEL-FERYIWADAEDVRSKLAAEPAL 434
Query: 355 VDLILEVVAANLCSSLEDVKTLIKHTLF-YQLKSPE 389
+L VA+ + E + + TL+ Q PE
Sbjct: 435 RTHLLATVASGFAHTREGLLEFLDQTLYATQTDDPE 470
>gi|389845505|ref|YP_006347744.1| ski2-like helicase [Haloferax mediterranei ATCC 33500]
gi|448616879|ref|ZP_21665589.1| ski2-like helicase [Haloferax mediterranei ATCC 33500]
gi|388242811|gb|AFK17757.1| ski2-like helicase [Haloferax mediterranei ATCC 33500]
gi|445751534|gb|EMA02971.1| ski2-like helicase [Haloferax mediterranei ATCC 33500]
Length = 849
Score = 135 bits (341), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 117/404 (28%), Positives = 192/404 (47%), Gaps = 49/404 (12%)
Query: 15 EFKFYLEEYA---GVK-GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENR--IDEIGL 68
EF+ + EEY GV G Y + L+ + I + T EK + SL++ N ++++
Sbjct: 105 EFERW-EEYGIDVGVSTGNYESSGEWLSSRDIIVATSEK----VDSLVRNNAAWLEQLTC 159
Query: 69 IVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVENS 128
+V DE H++++ RGP LE ++K+ L +Q+ A+SAT+GN ++ +++ +
Sbjct: 160 VVSDEVHLVDDRHRGPTLEVTLAKLRRLNPDLQVVALSATVGNAGEVADWLDAELVHSDW 219
Query: 129 RPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVL----- 183
RP V + SFD S E+ G G LV L
Sbjct: 220 RPIDLKMGVHYGNAI--SFDDGSQREV--------PVGRGERQAPALVADALDGDDDDDQ 269
Query: 184 ----IFCSSKIACSNLALRLQFDRFPGTKEY----KKQEKEDLIEALKEENDGKLSTNLE 235
+F +S+ + A R+ T++Y ++ E L +++ +D + S +L
Sbjct: 270 GSSLVFVNSRRNAESAARRMA----DVTEQYITGDERGELAQLAAEIRDVSDTETSEDLA 325
Query: 236 ECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRD----- 290
+ + G A+HHA L + R L+E+A+ ++ IC T TLAAGVN P++RVIIRD
Sbjct: 326 KAVAKGAAFHHAGLASEHRTLVEDAFRDRLIKCICATPTLAAGVNTPSRRVIIRDWQRYD 385
Query: 291 -SYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCK--TMQDFLRFSSMMNAGPEPISS 347
Y G + + QM+GRAGR GL GE+++L +D L F + A E + S
Sbjct: 386 GDYGGMKPLDVLEVHQMMGRAGRPGLDPYGEAVLLANDADTRDEL-FERYIWAEAEDVRS 444
Query: 348 HMDP-PTLVDLILEVVAANLCSSLEDVKTLIKHTLF-YQLKSPE 389
+ P L +L VA+ + E + + TL+ Q PE
Sbjct: 445 KLAAEPALRTHLLATVASGFAHTREGLLEFLDQTLYATQTDDPE 488
>gi|242398904|ref|YP_002994328.1| ski2-type helicase [Thermococcus sibiricus MM 739]
gi|242265297|gb|ACS89979.1| Putative ski2-type helicase [Thermococcus sibiricus MM 739]
Length = 744
Score = 135 bits (341), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 173/689 (25%), Positives = 285/689 (41%), Gaps = 134/689 (19%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVK-----GQYPPTKRQLNKKSIYICTIEKGSKLIG 55
+ EKY+ EFKF+ E G++ G Y T+ L K I I T EK L+
Sbjct: 103 LAEEKYK-------EFKFW--EKLGIRIAMTTGDYDSTEEWLGKYDIIIATSEKFDSLLR 153
Query: 56 SLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINAL 115
+ I +I L++ DE H+L RG LE +++ +L QI +SAT+GN +
Sbjct: 154 H--KSPWIKDINLVIADEIHLLGSYDRGATLEMILA---HLDDKAQILGLSATVGNAEEV 208
Query: 116 STFIEGITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHL 175
+ ++ + RP V + K VF + G+ E D V+
Sbjct: 209 AEWLNADLVMSEWRP------VALRKGVF--YHGELFWE---DGSIERFPTQWDSLVIDA 257
Query: 176 VQGNLMVLIFCSSKIACSNLALRL--QFDRFPGTKEYKKQEKEDLIEALKEENDGKLST- 232
++ L+F +++ + AL L + RF E +K LK+ DG +T
Sbjct: 258 LKKGKQALVFVNTRRSAEKEALLLAGKIQRFLTKPEERK---------LKQLADGLDTTP 308
Query: 233 ---NLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIR 289
L+E + GVA+HHA L ER +IE+A+ G +++I T TL+AGVNLPA RVIIR
Sbjct: 309 TNQKLKEALTKGVAFHHAGLGRTERSIIEDAFREGLIKVITATPTLSAGVNLPAYRVIIR 368
Query: 290 DSYVGRDFISLNM----YKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPI 345
D+ +F +++ +QM+GRAGR G++I++ KT + + PE +
Sbjct: 369 DTKRYSNFGWVDIPVLEIQQMMGRAGRPKYDIEGQAIIIAKTEKPEDLMKRYVLGKPEKL 428
Query: 346 SSHM-DPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQLKSPEDQQTFLETTLSEIVA 404
S + + + +L ++ + +++ ++ T +Y Q+ LE
Sbjct: 429 FSMLSNEASFRSQVLALITNFGVGNFKELVNFLERTFYYH------QRKNLE-------- 474
Query: 405 SLLASKGTMLTMNEAGHLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHML 464
+L AK+ I+Y L N+ LN M
Sbjct: 475 ------------------ALEGKAKS------------IVYF-LFENEFIDIDLNDQFM- 502
Query: 465 FLVIPLEYRIPSDGILL---SRSKVYDRYTKF--HPQTLRVAEALGVTENLVALNVTGKL 519
PL I + + L + K D + K +P L + + L T ++ +L V K
Sbjct: 503 ----PLPLGIRTSQLYLDPVTAKKFKDAFEKLEKNPNPLGIFQLLASTPDMSSLRV--KR 556
Query: 520 KDEKKALLCRFFHACILYDVLNFDNHQKVAKMYG-----------IQNSHLQNFLNVTSY 568
K+++ L + LY + + K K G I + L
Sbjct: 557 KEQEDLLDYAYEMEEYLYQNIPYWEDYKFEKFLGETKTAKLLLDWINEVNDVKILETYEI 616
Query: 569 FASKVYRFCEELPELWCYK-----QLLTDLPQTLMYCRAPNLRA----------LMDLPG 613
+YR EL + Y +L P+ L + + ++R L+ LP
Sbjct: 617 DTGDLYRIL-ELVDWLMYSLIELYKLFDPKPEVLDFLKKLHIRVKHGVREELLELITLPM 675
Query: 614 VKIGRARQLLNAGYSSLELIARADAKEMV 642
+ RAR L NAG+ ++ I RA A E++
Sbjct: 676 IGRKRARALYNAGFKGIDDIVRAKASELL 704
>gi|48478452|ref|YP_024158.1| ski2-like helicase [Picrophilus torridus DSM 9790]
gi|48431100|gb|AAT43965.1| helicase involved in UV-protection [Picrophilus torridus DSM 9790]
Length = 674
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 109/383 (28%), Positives = 177/383 (46%), Gaps = 48/383 (12%)
Query: 28 GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILE 87
G Y + + + T E+ +I + I++ G I+ DE H++N+ RGP LE
Sbjct: 98 GDYDSPPSFIKNNDVIVVTSERADSMIHH--DPDIINDFGAIIADEIHIINDEDRGPRLE 155
Query: 88 CVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSF 147
V+S + + I +SATI N+N L+ ++ T V N R + KR+
Sbjct: 156 TVLSSIRVINPDALILGLSATISNVNELAQWLNASTVVSNFRAVPLELGIIYKKRLITDS 215
Query: 148 DGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRLQFDRFPGT 207
+ L ++ +L + G A L+F +S+
Sbjct: 216 YERYLGQLDELSLIKDIINDGGQA-----------LVFRNSR------------------ 246
Query: 208 KEYKKQEK--EDLIEALKEEND---GKLSTNLEECILYGVAYHHADLTAGERRLIEEAYL 262
K EK E LI+ L E ND + +L + I +G+AYHHA L+ +RR IEE +
Sbjct: 247 ---KNAEKYAEMLIQHLPEFNDFNNDGMPESLVKMIRHGIAYHHAGLSNEDRRNIEEMFK 303
Query: 263 AGTLQIICCTSTLAAGVNLPAQRVIIRD-----SYVGRDFISLNMYKQMVGRAGRTGLQE 317
G +++I T TLAAGVNLPA+ VIIRD + R ++ + +QM+GRAGR +
Sbjct: 304 NGYIKVISATPTLAAGVNLPARLVIIRDITRYSNGYSRPISNIEI-QQMLGRAGRPKYDK 362
Query: 318 SGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDL-ILEVVAANLCSSLEDVKTL 376
G + + + ++ PEP+ S MD L+ IL ++++ + S +ED+
Sbjct: 363 MGYGYIYAASPASYDAAKKALSGEPEPVISKMDSQRLMRFNILALISSGMASRMEDLILF 422
Query: 377 IKHTLFYQLKSPEDQQTFLETTL 399
TL K +D ++E+ L
Sbjct: 423 YNETLMAIQKDVDDY--YIESAL 443
>gi|397781782|ref|YP_006546255.1| helicase [Methanoculleus bourgensis MS2]
gi|396940284|emb|CCJ37539.1| helicase [Methanoculleus bourgensis MS2]
Length = 712
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 117/402 (29%), Positives = 189/402 (47%), Gaps = 38/402 (9%)
Query: 37 LNKKSIYICTIEKGSKLIGSLIQENR---IDEIGLIVIDEFHMLNEPQRGPILECVVSKV 93
L + I + T EK + SL++ NR + EI L+V+DE H++++P RG LE VV+K+
Sbjct: 108 LGRNDIIVATSEK----VDSLLR-NRTPWLAEITLLVLDEVHLIDDPSRGATLEMVVAKL 162
Query: 94 LYLKKSIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRV-FQSFDGKSL 152
+ ++QI A+SATIGN L+ +++ + RP E V + F + +
Sbjct: 163 RHKNPAMQIIALSATIGNPGDLAGWLDAELVESDWRPVDLREGVFFQNGIQFADHNREVG 222
Query: 153 TEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRLQFD---RFPGTKE 209
+ ++LD VL V+ L+F SS+ A R P
Sbjct: 223 RQSKYEDLDL---------VLDTVEEGGQCLVFVSSRKNAEAFAKRAASGLKLANPTLAG 273
Query: 210 YKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQII 269
Y D I + + G++ L C+ G A+HHA L ER+++E + G +++I
Sbjct: 274 YA-----DKIRSNAGTDMGRI---LAACVAQGAAFHHAGLAREERQIVEAGFREGEIKVI 325
Query: 270 CCTSTLAAGVNLPAQRVIIRD-----SYVGRDFISLNMYKQMVGRAGRTGLQESGESIML 324
T TLAAG+NLPA+RVI+RD + G I + Y+QM GRAGR L GE++++
Sbjct: 326 ASTPTLAAGLNLPARRVIVRDYLRFNAGEGMVPIPVREYRQMAGRAGRPHLDPYGEAVLI 385
Query: 325 CKTMQDFLR-FSSMMNAGPEPISSH-MDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLF 382
K+ + F ++A E + S + L IL ++A N +V + T +
Sbjct: 386 AKSEEMIGELFDCYIDAPAEDVRSQCANEAVLCTHILSLIATNFARETGEVLRFMDGTFY 445
Query: 383 YQL-KSPEDQQTFLETTLSEIV-ASLLASKGTMLTMNEAGHL 422
+SP ++ L + A ++ G L E G L
Sbjct: 446 AHCGESPRALSRAVDRVLEFLREAEMITEVGEWLEPTEYGSL 487
>gi|448590503|ref|ZP_21650268.1| ATP-dependent DNA helicase [Haloferax elongans ATCC BAA-1513]
gi|445733999|gb|ELZ85558.1| ATP-dependent DNA helicase [Haloferax elongans ATCC BAA-1513]
Length = 639
Score = 135 bits (340), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 116/411 (28%), Positives = 183/411 (44%), Gaps = 39/411 (9%)
Query: 28 GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE--NRIDEIGLIVIDEFHMLNEPQRGPI 85
G + + L + I + T EK + S I+ + ++ + +V+DE H+L P RGP
Sbjct: 97 GDFDSAEEDLGEYDIVVATSEK----VDSAIRNGASWVESLACVVVDEVHLLGAPGRGPT 152
Query: 86 LECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQ 145
LE ++ + +Q+ A+SAT+ N ++++++ RP V D+ V
Sbjct: 153 LEMTLATLQRRVPDLQLVALSATVDNPETIASWLDAELVESTWRPVSLRTGVYSDESV-- 210
Query: 146 SFD-GKSLTEIYADNLDYSLTGSGPDA--------VLHLVQGNLMVLIFCSSKIACSNLA 196
+FD G SL +D G DA V V L F S+ +LA
Sbjct: 211 AFDDGTSLA------VDVPPLGPKDDADTEATVSLVADAVTSGGQCLAFVRSRREAESLA 264
Query: 197 LRL-QFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERR 255
RL + D P T DL + L+E +L +C GV +HHA L + R
Sbjct: 265 ERLAEEDLSPAT---------DLGDELRELGGTATGAHLADCASTGVGFHHAGLRSSHRA 315
Query: 256 LIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS--YVGR--DFISLNMYKQMVGRAG 311
+E A+ L +IC T TLAAGVN+PA+RV+IRD Y G ++I + QM GRAG
Sbjct: 316 AVETAFRERRLAVICATPTLAAGVNVPARRVVIRDQKRYTGDAMEWIPVLDVHQMCGRAG 375
Query: 312 RTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDP-PTLVDLILEVVAANLCSSL 370
R L GE++++ + A E + S D +L +L VVA+ S+
Sbjct: 376 RPHLDPYGEAVLVGDEATHDELVERYVEADAEAVDSQFDDRESLRTHVLSVVASGFADSV 435
Query: 371 EDVKTLIKHTLFYQLKSPEDQQTFLETTLSEI-VASLLASKGTMLTMNEAG 420
V + T + ++ D + +SE+ +L G+ L+ G
Sbjct: 436 AGVVDVFAATYYAHQQADVDLTALVSDVVSELERMEMLTVDGSTLSATTLG 486
>gi|70606102|ref|YP_254972.1| DNA helicase [Sulfolobus acidocaldarius DSM 639]
gi|449066304|ref|YP_007433386.1| DNA helicase [Sulfolobus acidocaldarius N8]
gi|449068580|ref|YP_007435661.1| DNA helicase [Sulfolobus acidocaldarius Ron12/I]
gi|121723841|sp|Q4JC00.1|HELS_SULAC RecName: Full=Putative ski2-type helicase
gi|68566750|gb|AAY79679.1| DNA helicase [Sulfolobus acidocaldarius DSM 639]
gi|449034812|gb|AGE70238.1| DNA helicase [Sulfolobus acidocaldarius N8]
gi|449037088|gb|AGE72513.1| DNA helicase [Sulfolobus acidocaldarius Ron12/I]
Length = 705
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 113/365 (30%), Positives = 180/365 (49%), Gaps = 37/365 (10%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGV-KGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQ 59
+ EKY + K E+ F + GV G Y L I + T EK + SL +
Sbjct: 83 LTSEKYSTF-KDWEKLGFKV----GVTSGDYDTDDPWLRNFDIIVTTYEK----LDSLWR 133
Query: 60 EN--RIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALST 117
+ + +I V+DEFH +N+ RGP++E V + K+ I A+SATIGN ++
Sbjct: 134 HSAEWLKDIDYFVLDEFHYMNDGDRGPVVEGVAVRA---KRQGTILALSATIGNAKDVAK 190
Query: 118 FIEGITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGP--DAVLHL 175
++ N RP V + + V S K +Y+D L G P L +
Sbjct: 191 WLNADIVATNWRP------VPLKEGVMYSEGKKGHIILYSDGTTNKLKGDDPIIAYTLDI 244
Query: 176 VQGNLMVLIFCSSKIACSNLALRL-QFDRFPGTKEYKKQEKEDLIEALKE--ENDGKLST 232
+ V++F SS+ A+++ Q+ F + K E + I+ +++ N+ ++
Sbjct: 245 LSKGGQVIVFRSSRKYAETTAMKISQYMNFVKLDDKKLLETAERIKEVEDAGSNEKEVLY 304
Query: 233 NLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSY 292
NL I+ GVA+HHA L+ G R +IE ++ +++I T TLAAGVNLPA+ V+I D Y
Sbjct: 305 NL---IVRGVAFHHAGLSKGLRDIIEASFRERIIKVITATPTLAAGVNLPARAVVIGDIY 361
Query: 293 ------VG-RDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLR-FSSMMNAGPEP 344
VG + IS Y+QM GRAGR G GE+I+L ++ + + +++ EP
Sbjct: 362 RFNRKIVGFTEMISTMEYRQMSGRAGRPGYDNHGEAIILVRSKVEVDKVIDKYLHSDIEP 421
Query: 345 ISSHM 349
I S +
Sbjct: 422 IESKL 426
>gi|448611359|ref|ZP_21661993.1| ski2-like helicase [Haloferax mucosum ATCC BAA-1512]
gi|445743791|gb|ELZ95272.1| ski2-like helicase [Haloferax mucosum ATCC BAA-1512]
Length = 855
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 116/404 (28%), Positives = 190/404 (47%), Gaps = 49/404 (12%)
Query: 15 EFKFYLEEYA---GVK-GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENR--IDEIGL 68
EF+ + EEY GV G Y + L+ + I + T EK + SL++ N +D++
Sbjct: 87 EFERW-EEYGIDVGVSTGNYESSGEWLSSRDIIVATSEK----VDSLVRNNAAWMDQLSC 141
Query: 69 IVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVENS 128
+V DE H++N+ RGP LE ++K+ L +Q+ A+SAT+GN ++ +++ +
Sbjct: 142 VVADEVHLVNDRNRGPTLEVTLAKLRRLNPDLQVVALSATVGNAGEVAEWLDAELVQSDW 201
Query: 129 RPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVL----- 183
RP V + +FD S E+ G G LV L
Sbjct: 202 RPIDLKMGVHYGNAI--NFDDGSQREVS--------VGRGERQAPALVADALDGDDDDDQ 251
Query: 184 ----IFCSSKIACSNLALRLQFDRFPGTKEY----KKQEKEDLIEALKEENDGKLSTNLE 235
+F +S+ + A R+ T++Y ++ E L +++ +D + S +L
Sbjct: 252 GSSLVFVNSRRNAESAARRMA----DVTEQYITGDERGELAQLAAEIRDVSDTETSEDLA 307
Query: 236 ECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRD----- 290
+ G A+HHA L + R L+E+A+ ++ I T TLAAGVN P++RVI+RD
Sbjct: 308 NVVAKGAAFHHAGLASEHRTLVEDAFRDRLIKCISATPTLAAGVNTPSRRVIVRDWQRYD 367
Query: 291 -SYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCK--TMQDFLRFSSMMNAGPEPISS 347
Y G + + QM+GRAGR GL GE+++L +D L F + A E + S
Sbjct: 368 GDYGGMKPLDVLEVHQMMGRAGRPGLDPYGEAVLLASDADTRDEL-FERYIWAEAENVRS 426
Query: 348 HMDP-PTLVDLILEVVAANLCSSLEDVKTLIKHTLF-YQLKSPE 389
+ P L +L VA+ + E + + TL+ Q PE
Sbjct: 427 KLAAEPALRTHLLATVASGFAHTREGLLEFLDQTLYATQTDDPE 470
>gi|340344108|ref|ZP_08667240.1| DEAD/DEAH box helicase domain protein [Candidatus Nitrosoarchaeum
koreensis MY1]
gi|339519249|gb|EGP92972.1| DEAD/DEAH box helicase domain protein [Candidatus Nitrosoarchaeum
koreensis MY1]
Length = 692
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 110/353 (31%), Positives = 177/353 (50%), Gaps = 32/353 (9%)
Query: 28 GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQEN--RIDEIGLIVIDEFHMLNEPQRGPI 85
G + ++ L K +I + T EK + S+I+ IDEIGL++ DE H++ + RGP
Sbjct: 91 GDFENIEKNLEKNNILVLTNEK----MDSIIRHGAEWIDEIGLVIADEIHLIGDESRGPT 146
Query: 86 LECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQ 145
LE +++K+ L+ QI +SATI N + L+ +++ + RP SE V V
Sbjct: 147 LEMILTKLKLLESKPQILGLSATITNSDELANWLDCKLVKNDWRPVPLSEGVYDAGGVIM 206
Query: 146 SFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRL-----Q 200
+ +GK ++ S+ G D + V+ L+F ++ LA + Q
Sbjct: 207 N-NGKKF------EVEPSIRGIPIDLGVQSVKDGGQSLVFAETRTRSKALATKAADIISQ 259
Query: 201 FDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEA 260
F ++E +K K + L +L L I GVA+HHA L R+ IE
Sbjct: 260 FLEKNESEELEKVSK----KILSNNEHTELVKTLATLIKKGVAFHHAGLNQNCRQTIETE 315
Query: 261 YLAGTLQIICCTSTLAAGVNLPAQRVIIR-----DSYVGRDF-ISLNMYKQMVGRAGRTG 314
+ GT++++ T TLAAGVNLPA+RV+I ++ VG + IS+ YKQ+ GRAGR
Sbjct: 316 FRKGTIKLLSSTPTLAAGVNLPARRVVISNISRYNAKVGANKPISILEYKQLCGRAGRPQ 375
Query: 315 LQESGESIMLCK-TMQDFLRFSSMMNAGPEPISSHM-DPPTLVDLILEVVAAN 365
+ GESI++ +D + + + PEPI S + D +L +L V+ +
Sbjct: 376 YDDYGESIIVGNGNSEDLMEY--YVRGEPEPILSKITDDKSLRTHVLSVIVTS 426
>gi|20093551|ref|NP_613398.1| superfamily II helicase [Methanopyrus kandleri AV19]
gi|19886395|gb|AAM01328.1| Predicted Superfamily II helicase [Methanopyrus kandleri AV19]
Length = 711
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 115/405 (28%), Positives = 192/405 (47%), Gaps = 44/405 (10%)
Query: 46 TIEKGSKLIGSL-IQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFA 104
T+ KL SL + + ++E+ L+V+DE H++ + RG E +++ V ++ + + A
Sbjct: 131 TVTTAEKLDASLRSRPSLVEEVDLLVLDEVHIVGDRNRGATYEALIALVRTFREKVSLLA 190
Query: 105 MSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSL 164
+SAT+GN L+ +++ + + RP K E+ V+ D K
Sbjct: 191 LSATVGNAEELADWLDATPVISDWRPVKL-EHRIVEVPSASEKDAK-------------- 235
Query: 165 TGSGPDAVLHLVQGNL----MVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIE 220
V L++ L L+F S+ A L E +K+E L E
Sbjct: 236 -------VRKLIRKCLREGGQALVFLYSRRRAMTEAKNLSRTVSGLLSEDEKKELRTLAE 288
Query: 221 ALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVN 280
+ E +G+ + L ++ GVA+HHA LTA +R L+E+A+ G L+++ T TLAAGVN
Sbjct: 289 RVSELGEGEETEILAYAVMRGVAFHHAGLTAEQRALVEDAFREGLLKVVVSTPTLAAGVN 348
Query: 281 LPAQRVIIRD--SYVGRDF-ISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSM 337
LPA+ VII+D +G + + N +KQM GRAGR G + G +L + L
Sbjct: 349 LPARYVIIKDFGMRLGNEIKPTKNEFKQMAGRAGRPGYDDMGLVFVLTTSNWKEL-AEEY 407
Query: 338 MNAGPEPISSHM--DPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQLK-SPEDQQTF 394
+++ +P+ S + P L +L +VAA C + DV + +T + PED
Sbjct: 408 VHSEADPVQSRIWVSGPQLRRFLLGLVAAGFCRQIADVMRVALNTFMSSVNIRPED---- 463
Query: 395 LETTLSEIVASLLASKGTMLTMNEAGHLSLTSIAKAAVQAGLSHD 439
LS + +L G + + G L+ T + A Q+ L+ D
Sbjct: 464 --AVLSSL--KMLVDWGFLEELE--GELTATKVGHAVSQSYLTPD 502
>gi|240102927|ref|YP_002959236.1| ski2-like helicase [Thermococcus gammatolerans EJ3]
gi|239910481|gb|ACS33372.1| ski2-type helicase, putative [Thermococcus gammatolerans EJ3]
Length = 720
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 111/361 (30%), Positives = 174/361 (48%), Gaps = 43/361 (11%)
Query: 1 MVHEKYQSLAKAAEEFKFYLE---EYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSL 57
+ EKY+ EFK + + + A G Y T L + I + T EK L+
Sbjct: 80 LAEEKYR-------EFKEWEKLGLKVAATTGDYDSTDDWLGRYDIIVATAEKFDSLLRH- 131
Query: 58 IQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALST 117
I+++ L+V DE H++ RG LE +++ +L QI A+SAT+GN L+
Sbjct: 132 -GARWINDVKLVVADEVHLIGSYDRGATLEMILTHML---GRAQILALSATVGNAEELAE 187
Query: 118 FIEGITYVENSRPTKHSEYVTVDKRVFQ-----SFDGKSLTEIYADNLDYSLTGSGPDAV 172
+++ V + RP V + + VF DGK E Y +N YSL V
Sbjct: 188 WLDASLVVSDWRP------VQLRRGVFHLGTLIWEDGK--VESYPENW-YSL-------V 231
Query: 173 LHLVQGNLMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLST 232
+ V+ L+F +++ + AL L + K EK L + D S
Sbjct: 232 VDAVKRGKGALVFVNTRRSAEKEALALSK---LVSSHLTKPEKRALESLASQLEDNPTSE 288
Query: 233 NLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS- 291
L+ + GVA+HHA L+ ER LIE+A+ G +++I T TL+AGVNLP+ RVIIRD+
Sbjct: 289 KLKRALRGGVAFHHAGLSRVERTLIEDAFREGLIKVITATPTLSAGVNLPSFRVIIRDTK 348
Query: 292 -YVGRDFISLNMY--KQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSH 348
Y G + + + +QM+GRAGR + GE+I++ +T + + PE + S
Sbjct: 349 RYAGFGWTDIPVLEIQQMMGRAGRPRYDKYGEAIIVARTDEPGKLMERYIRGKPEKLFSM 408
Query: 349 M 349
+
Sbjct: 409 L 409
Score = 43.5 bits (101), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 55/123 (44%), Gaps = 6/123 (4%)
Query: 524 KALLCRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFAS---KVYRFCEEL 580
+ L + A +L D +N ++ + Y I L L + + ++Y+ E
Sbjct: 563 QGFLGQVKTAKVLLDWINEVPEARIYETYSIDPGDLYRLLELADWLMYSLIELYKLFEPK 622
Query: 581 PELWCYKQLLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIARADAKE 640
E+ Y L DL L + L L+ LP + RAR L NAG+ S+E IA A E
Sbjct: 623 EEILNY---LRDLHLRLRHGVREELLELVRLPNIGRKRARALYNAGFRSVEAIANAKPAE 679
Query: 641 MVA 643
++A
Sbjct: 680 LLA 682
>gi|313126895|ref|YP_004037165.1| superfamily ii helicase [Halogeometricum borinquense DSM 11551]
gi|448288639|ref|ZP_21479837.1| superfamily ii helicase [Halogeometricum borinquense DSM 11551]
gi|312293260|gb|ADQ67720.1| superfamily II helicase [Halogeometricum borinquense DSM 11551]
gi|445569024|gb|ELY23599.1| superfamily ii helicase [Halogeometricum borinquense DSM 11551]
Length = 654
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 124/436 (28%), Positives = 190/436 (43%), Gaps = 59/436 (13%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVK-----GQYPPTKRQLNKKSIYICTIEKGSKLIG 55
+ EKY++ A E GV G + T L I + T EK +
Sbjct: 76 LAREKYETFA-----------ELPGVSVGISTGDFDSTDEDLADNDIVVATAEK----VD 120
Query: 56 SLIQENR--IDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNIN 113
S I+ I+ + +V+DE H+L RGP LE ++ + +QI A+SAT+ N
Sbjct: 121 SAIRTGAPWIESLACVVVDEVHLLGSDGRGPTLEVTLATLQRRAPGLQIVALSATVDNPE 180
Query: 114 ALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDA-- 171
++ +++ RP V D V +FD S A +D TG D
Sbjct: 181 DIADWLDADLVETTWRPVSLRTGVYADGSV--TFDDDS-----ALGIDVEPTGPDDDDAT 233
Query: 172 ------VLHLVQGNLMVLIFCSSKIACSNLALRLQF-----DRFPGTKEYKKQEKEDLIE 220
+ V L F S+ +LA RL D G E D +
Sbjct: 234 EATAALIADAVADGGQCLAFVRSRREAESLATRLADESLADDSLAGASPNDCAELADEVS 293
Query: 221 ALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVN 280
+ G + L + + GVA+HHA + +G R L+E A+ L++IC T TLAAGVN
Sbjct: 294 EIGATETG---SRLADVVESGVAFHHAGVRSGHRALVESAFREKRLKVICATPTLAAGVN 350
Query: 281 LPAQRVIIRD--SYVGRDFISLNMYK--QMVGRAGRTGLQESGESIML-----CKTMQDF 331
+PA+RV+IRD Y G L + + QM GRAGR L GE+I++ T + +
Sbjct: 351 VPARRVVIRDLKRYTGEKMTWLPVLEVHQMCGRAGRPHLDPYGEAILVNDGDESDTEELW 410
Query: 332 LRFSSMMNAGPEPISSHMDP-PTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQLKSPED 390
R+ + A E + S + L +L VVA+ S + V L+ T F+ +SP+
Sbjct: 411 ERY---VTAEAEAVESKLAARDALRTHVLSVVASGFADSRDGVVDLLDAT-FFAHQSPDV 466
Query: 391 QQTFLETTLSEIVASL 406
+ L ++ E +A +
Sbjct: 467 NRARLVDSVVEELAEM 482
>gi|171184588|ref|YP_001793507.1| DEAD/DEAH box helicase [Pyrobaculum neutrophilum V24Sta]
gi|170933800|gb|ACB39061.1| DEAD/DEAH box helicase domain protein [Pyrobaculum neutrophilum
V24Sta]
Length = 729
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 107/398 (26%), Positives = 182/398 (45%), Gaps = 39/398 (9%)
Query: 28 GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILE 87
G + R+L++ + + T EK L+ + + + +V+DE H L +P+RGP+LE
Sbjct: 124 GDFDSEDRRLHEYDVLVVTYEKLDSLLRH--RPGWLSSVKTVVVDEIHYLGDPRRGPVLE 181
Query: 88 CVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSF 147
+++K+ +L Q +SAT+GN ++ ++ + RP E V R++
Sbjct: 182 SIIAKLKHLGLRAQFIGLSATVGNAAEVAEWLGARLVASSWRPVPLREGVYHGGRIY--- 238
Query: 148 DGKSLTEIYADNLDYSLTGSGPDAVLHL----VQGNLMVLIFCSSKIAC--SNLALRLQF 201
Y D + +G DA + L V G L+F SS+ + A+
Sbjct: 239 --------YPDGTYRRVEAAG-DAEVALAVDAVAGGGQALVFASSRSSTVRIAKAVAKAI 289
Query: 202 DRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAY 261
P + E + + + L E + GVA+H+A L RRL+EE +
Sbjct: 290 AAHPARLIDVAEASRLAGEVARASSSKIIGRELAELVARGVAFHNAGLELEVRRLVEEGF 349
Query: 262 LAGTLQIICCTSTLAAGVNLPAQRVIIR-----DSYVGRDFISLNMYKQMVGRAGRTGLQ 316
G ++++ T+TLAAGVNLPA+RV++ D VGR+ I + YKQM GRAGR GL
Sbjct: 350 RRGVVKVVVSTTTLAAGVNLPARRVVVADFERFDPVVGREEIPVLEYKQMAGRAGRPGLD 409
Query: 317 ESGESIMLCKT-------MQDFLRFSSMMNAGPEPISSH-MDPPTLVDLILEVVAANLCS 368
GE++++ ++ M+ ++R E + SH + P L +L V
Sbjct: 410 AVGEAVLVARSKNEVGYLMERYVRGQV------EEVRSHILAGPNLRAHVLGAVGGGYAR 463
Query: 369 SLEDVKTLIKHTLFYQLKSPEDQQTFLETTLSEIVASL 406
S++++ +TL Y + L + + V L
Sbjct: 464 SIDELVDFFSNTLGYHQARTAVKSALLRSRVGAAVEEL 501
>gi|401422585|ref|XP_003875780.1| DNA polymerase theta (helicase domain only),putative [Leishmania
mexicana MHOM/GT/2001/U1103]
gi|322492019|emb|CBZ27293.1| DNA polymerase theta (helicase domain only),putative [Leishmania
mexicana MHOM/GT/2001/U1103]
Length = 1882
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 128/473 (27%), Positives = 195/473 (41%), Gaps = 123/473 (26%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+ EK +L A + F ++ + G G++P + Y+CTIEK + L+ +++E
Sbjct: 937 LAEEKTMALQPLATAYDFNVDGHYGSSGRFP----LCGAPAAYVCTIEKANALLNHMLEE 992
Query: 61 NR--------IDEIGLI-----------VIDEFHMLNEPQR---------GPILECVVS- 91
R +DE+ ++ + + +LN ++ G C S
Sbjct: 993 GRTDEIGAVVVDELHMVGESGRGATLELFLSKVLVLNAARQRKRDAVVAPGTQSRCSASG 1052
Query: 92 --------------------------KVLYLKKSIQIFAMSATIGNINALSTFIEGITYV 125
K +QI MSAT+ N+ L+ ++ +
Sbjct: 1053 SRPGWPEELEDAAEDRHEGAVMTDTGKAAADPGPLQIIGMSATVPNLCTLAEWLRAACFE 1112
Query: 126 ENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQ--GNLMVL 183
+ RP Y V V + DG+ NL +GS +L L VL
Sbjct: 1113 YDFRPVPLRAYSVVGGLVLR--DGQR----NERNLS---SGSVTQHLLELATEVPEASVL 1163
Query: 184 IFCSSKIACSNLA------LRLQF----------------------------DRFPGTKE 209
IFC+S+ C + A LR Q FP +
Sbjct: 1164 IFCASRQQCVDTAKGIVNYLRAQAIAGQKALPAWMSGSSDAAAEAQHVSVLGAPFPSSA- 1222
Query: 210 YKKQEKEDLIEALKEENDGKL--------------STNLEECILYGVAYHHADLTAGERR 255
K + A+ + + ++ L E + +GVA+HH L A ER
Sbjct: 1223 -KGPATAAAMTAVPSQGSAAIKGLLADLEALAHHEASQLSEVVGFGVAFHHGGLLAEERD 1281
Query: 256 LIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGRDFISLNMYKQMVGRAGRTGL 315
LIE A+ ++I+CCTSTLAAGVNLPA+RVII+ YVGR+F++ + Y QM GRAGR GL
Sbjct: 1282 LIETAFRRKYIRILCCTSTLAAGVNLPARRVIIKTPYVGREFLTKSRYLQMCGRAGRAGL 1341
Query: 316 QESGESIMLCKTMQDFLRFSSMMNAGPEPISSHM--DPPTLVDLILEVVAANL 366
GES +L + +D R ++M+A EP S + D TL +LE V L
Sbjct: 1342 DPYGESFLLLSS-RDQARGHALMHAPVEPCRSQLLEDGQTLTRSLLECVGVGL 1393
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 129/271 (47%), Gaps = 25/271 (9%)
Query: 424 LTSIAKAAVQAGLSHDVCLIIYSDLLH-NKLNFCLLNSLHMLFLVIPLEYRIPSDGILLS 482
+TS ++V++ S + L++ ++L L + LH+ + + PL D LL
Sbjct: 1600 VTSFGSSSVRSCFSVEEALLLRAELDELRHTGLILSDDLHLCYFLTPLREVGKCDWELLR 1659
Query: 483 --RSKVYDRYTKFHPQTLRVAEALGVTENLV---ALNVTGKLK---DEKKALLC--RFFH 532
S++ D R+A LGV V A+ + G L+ + ++ L RF+
Sbjct: 1660 LMMSRMSDSRQ-------RIASLLGVDTYFVDQQAMGLGGPLEATEEGRRRLFTAKRFYV 1712
Query: 533 ACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELWCYKQLLTD 592
A +L DVL V + Y + LQ+ + S F+ + FC + E + + +L+
Sbjct: 1713 ALMLADVLAEVPMTTVEERYNVSRGQLQSLMRSASMFSCSITNFCHAM-EWFSLEAVLSS 1771
Query: 593 LPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIARADAKEMVAKIRHLPLRS 652
+ L + P+L LM++ G++ RAR L NAG+ L IA ADA +MV+K++ + +
Sbjct: 1772 FVKRLGFGVKPDLLPLMEIRGMQPPRARALWNAGFKKLAAIAVADADDMVSKVKSMNPKD 1831
Query: 653 ARNLISAAKLHFITKMDKVEAMKNLIQNLQK 683
++ AAK F TK + A++ LQ
Sbjct: 1832 SK----AAK--FFTKRSALMAIREANLALQS 1856
>gi|409095959|ref|ZP_11215983.1| ski2-like helicase [Thermococcus zilligii AN1]
Length = 726
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 110/350 (31%), Positives = 172/350 (49%), Gaps = 29/350 (8%)
Query: 10 AKAAEEFKFYLE-EYAGVK-----GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRI 63
A A E+++ + E E GV+ G Y T L K I + T EK L+ I
Sbjct: 79 ALAEEKYREFREWESLGVRVAVTTGDYDSTDEWLGKYDIIVATAEKFDSLLRH--SPRWI 136
Query: 64 DEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGIT 123
E+ L+V DE H++ RG LE ++S +L QI A+SATIGN L+ +++
Sbjct: 137 KEVKLVVADEVHLIGSYDRGATLEMILSHML---GRAQILALSATIGNAEELAEWLDAEL 193
Query: 124 YVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVL 183
V + RP + + V +F DGK + Y +N + SL + V+ L
Sbjct: 194 IVSDWRPVELRKGVFHLGTLFWE-DGK--IDRYPENWE-SLA-------VDAVKRGKQAL 242
Query: 184 IFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVA 243
+F S++ + A+ L ++ K E +L + + D + L+ + GVA
Sbjct: 243 VFVSTRQSAEKEAVSLSSKI---SRLLTKPEARELEQLTSQIEDNPTTEKLKMALKGGVA 299
Query: 244 YHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGRDF----IS 299
+HHA L ER LIE+A+ G +++I T TL+AG+NLPA RVIIRD+ DF I
Sbjct: 300 FHHAGLGRAERTLIEDAFREGLIKVITATPTLSAGMNLPAFRVIIRDTRRYTDFGWTDIP 359
Query: 300 LNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHM 349
+ +QM+GRAGR + GE+I++ +T ++ PE + S +
Sbjct: 360 VLEIQQMMGRAGRPKYDKVGEAIIVARTEDPKGLLGKYIHGKPEKLFSML 409
>gi|448503936|ref|ZP_21613565.1| ski2-like helicase [Halorubrum coriense DSM 10284]
gi|445692137|gb|ELZ44320.1| ski2-like helicase [Halorubrum coriense DSM 10284]
Length = 814
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 109/395 (27%), Positives = 186/395 (47%), Gaps = 46/395 (11%)
Query: 15 EFKFYLEEY---AGVK-GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENR--IDEIGL 68
EF+ + EE+ GV G Y L + I + T EK + SLI+ ID++
Sbjct: 87 EFERW-EEFDVTVGVSTGNYDSDGEWLASRDIIVATSEK----VDSLIRNGAPWIDDLTC 141
Query: 69 IVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVENS 128
+V DE H++++ RGP LE ++K+ + +Q A+SAT+GN + ++ +++ +
Sbjct: 142 VVSDEVHLVDDSHRGPTLEVTLAKLRKVNPGLQTVALSATVGNADVIADWLDAELVESDW 201
Query: 129 RPTKHSEYVTVDKRVFQSFDGKSLTEI------------YADNLDYSLTGSGPDAVLHLV 176
RP + V + +FD E+ D LD G G +
Sbjct: 202 RPIELHTGVHFGSAI--NFDDGRQREVPVERGEDQTAKLVGDALDTEEDGQGGSS----- 254
Query: 177 QGNLMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEE 236
L+F +S+ + A +L P ++ +L E ++ +D S +L +
Sbjct: 255 ------LVFVNSRRNAESSARKLTDVTGPRLTGDERDRLRELAEEIRGVSDTDTSEDLAD 308
Query: 237 CILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRD------ 290
+ G A+HHA L + R L+E+A+ ++ + T TLAAGVN PA+RVI+RD
Sbjct: 309 AVEEGSAFHHAGLASEHRGLVEDAFRDRLIKCVSATPTLAAGVNTPARRVIVRDWRRYDG 368
Query: 291 SYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCK--TMQDFLRFSSMMNAGPEPISSH 348
+ G + + QM GRAGR GL GE+++L Q+ L F + A EP+ S
Sbjct: 369 EFGGMKPLDVLEVHQMCGRAGRPGLDPYGEAVLLANDADTQEEL-FERYVWAEAEPVRSK 427
Query: 349 MDP-PTLVDLILEVVAANLCSSLEDVKTLIKHTLF 382
+ P L +L VA+ ++ + + + + +TL+
Sbjct: 428 LAAEPALRTHVLATVASGFAATRDGLLSFLDNTLY 462
>gi|308162866|gb|EFO65235.1| DNA helicase [Giardia lamblia P15]
Length = 898
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 136/484 (28%), Positives = 223/484 (46%), Gaps = 63/484 (13%)
Query: 25 GVKG--QYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNE-PQ 81
G+ G Q P R ++ IY+CT EK + +Q+ + +GL+V DE H++ +
Sbjct: 198 GITGMKQVPRVSR--SRPIIYVCTFEKAILVFSRFLQKGLVAHLGLLVFDEIHLIGDGST 255
Query: 82 RGPILECVVSKVLYLKKSI------QIFAMSATIGNINALSTFIEGITYVENSRPTKHSE 135
R LE +S+++ L+K+ +I MSAT+ NI+ L ++ Y N RP E
Sbjct: 256 RACKLELFISQLILLEKTARIQICYRIVGMSATLSNISDLQRWLGCYVYECNFRPISLQE 315
Query: 136 YVTVDKRVF------QSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSK 189
YV VDK ++ + + + + + L S P + L+ ++ IF ++K
Sbjct: 316 YVLVDKNLYLFNTQTKRLEPRGQVLVNSPITKVKLNIS-PLNTISLIALKPLI-IFVATK 373
Query: 190 IACSNLALRLQ---FDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHH 246
N+A L FP ++ LI L + D + I GV YH+
Sbjct: 374 HETVNVANSLAEIIRTNFPSPPAELMAKRSQLIAELNQLGD----VSWTPLISAGVMYHN 429
Query: 247 ADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGRDFISLNMYKQM 306
+ L + ER LIEEA+ + + T+T++AGVNLPA+ V+IR +G + Y+QM
Sbjct: 430 SSLASLERTLIEEAFSNSVIHTLVATTTISAGVNLPARSVVIRYQKIGSIELDGAKYRQM 489
Query: 307 VGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISS--------HMDPPTLVDLI 358
+GRAGR GL SG S +L T +D + +++G + +++ H P L L
Sbjct: 490 IGRAGRMGLATSGHSFLLL-TERDKKEVLAKLSSGSDIVAATEQLLSELHTIRPILSSLS 548
Query: 359 LEVVAANLCSSLEDVKTLIKHTLFYQLKSPEDQQTFLETTLSEIVASL-----------L 407
++A +I ++ Y + E F+E+TL+ + SL L
Sbjct: 549 KSSISAE----------VILNSCIYDVSVRE----FIESTLAHVQGSLKHENVVQTLEIL 594
Query: 408 ASKGTMLTMNEAGHLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLL-NSLHMLFL 466
S G +L N G + LT +A V AG L+IY+ L + L+ N H+
Sbjct: 595 QSLGLVLFSN--GIVRLTPRGRACVDAGTDIYNSLVIYAYLQTFQTEGLLVGNDYHICCT 652
Query: 467 VIPL 470
+IP+
Sbjct: 653 IIPI 656
>gi|223478715|ref|YP_002583268.1| DEAD/DEAH box helicase [Thermococcus sp. AM4]
gi|214033941|gb|EEB74767.1| DEAD/DEAH box helicase domain protein [Thermococcus sp. AM4]
Length = 720
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 110/361 (30%), Positives = 174/361 (48%), Gaps = 43/361 (11%)
Query: 1 MVHEKYQSLAKAAEEFKFYLE---EYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSL 57
+ EKY+ EFK + + + A G Y T L + I + T EK L+
Sbjct: 80 LAEEKYR-------EFKEWEKLGLKVAATTGDYDSTDDWLGRYDIIVATAEKFDSLLRH- 131
Query: 58 IQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALST 117
ID++ L+V DE H++ RG LE +++ +L QI A+SAT+GN L+
Sbjct: 132 -GARWIDDVKLVVADEVHLIGSYDRGATLEMILTHML---GRAQILALSATVGNAEELAE 187
Query: 118 FIEGITYVENSRPTKHSEYVTVDKRVFQ-----SFDGKSLTEIYADNLDYSLTGSGPDAV 172
+++ V + RP V + + VF DGK + Y +N YSL V
Sbjct: 188 WLDASLVVSDWRP------VQLRRGVFHLGTLIWEDGK--VQSYPENW-YSL-------V 231
Query: 173 LHLVQGNLMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLST 232
V+ L+F +++ + AL + + K EK L + D S
Sbjct: 232 TDAVKRGKGALVFVNTRRSAEKEALAISK---LVSSHLTKPEKRALESLASQLEDNPTSE 288
Query: 233 NLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS- 291
L++ + GVA+HHA L+ ER LIE+A+ G +++I T TL+AGVNLP+ RVIIRD+
Sbjct: 289 KLKKALRGGVAFHHAGLSRVERTLIEDAFREGLIKVITATPTLSAGVNLPSFRVIIRDTK 348
Query: 292 -YVGRDFISLNMY--KQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSH 348
Y G + + + +QM+GRAGR + GE+I++ +T + + PE + S
Sbjct: 349 RYAGFGWTDIPVLEIQQMMGRAGRPRYDKYGEAIIIARTDEPGKLMERYIRGKPEKLFSM 408
Query: 349 M 349
+
Sbjct: 409 L 409
Score = 39.3 bits (90), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 54/122 (44%), Gaps = 6/122 (4%)
Query: 524 KALLCRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFAS---KVYRFCEEL 580
+ L + A +L D +N ++ + Y I L L + + ++Y+ E
Sbjct: 563 QGFLGQVKTAKVLLDWINEVPEARIYETYLIDPGDLYRLLELADWLMYSLIELYKLFEPK 622
Query: 581 PELWCYKQLLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIARADAKE 640
E+ Y L DL L + L L+ LP + RAR L NAG+ ++E IA A E
Sbjct: 623 EEILNY---LRDLHLRLRHGVREELLELVKLPNIGRKRARALYNAGFKNVEAIANAKPAE 679
Query: 641 MV 642
++
Sbjct: 680 LL 681
>gi|52545659|emb|CAH56359.1| hypothetical protein [Homo sapiens]
Length = 132
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 63/130 (48%), Positives = 85/130 (65%), Gaps = 1/130 (0%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V EK L+ E F++EEYAG KG++PPTKR+ KKS+YI TIEKG L+ SLI+
Sbjct: 3 IVQEKISGLSSFGIELGFFVEEYAGSKGRFPPTKRR-EKKSLYIATIEKGHSLVNSLIET 61
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIE 120
RID +GL+V+DE HM+ E RG LE ++K+LY K+ QI MSAT+ N+ L F++
Sbjct: 62 GRIDSLGLVVVDELHMIGEGSRGATLEMTLAKILYTSKTTQIIGMSATLNNVEDLQKFLQ 121
Query: 121 GITYVENSRP 130
Y RP
Sbjct: 122 AEYYTSQFRP 131
>gi|448727027|ref|ZP_21709405.1| ski2-like helicase [Halococcus morrhuae DSM 1307]
gi|445792396|gb|EMA43002.1| ski2-like helicase [Halococcus morrhuae DSM 1307]
Length = 743
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 177/697 (25%), Positives = 287/697 (41%), Gaps = 98/697 (14%)
Query: 15 EFKFYLEEYA---GVK-GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENR--IDEIGL 68
EF+ + E+Y GV G Y L I + T EK + SL++ + ID++
Sbjct: 87 EFETF-EQYGLTVGVSTGNYDSDGEWLATCDIIVATSEK----VDSLVRNDAPWIDQLSC 141
Query: 69 IVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVENS 128
+V DE H++++ RGP LE ++K+ +Q A+SATIGN L+ +++
Sbjct: 142 VVSDEVHLVDDGHRGPTLEVTLAKLRQRNPGLQTVALSATIGNPEILADWLDAELVDSTW 201
Query: 129 RPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDA--VLHLVQGNLMVLIFC 186
RP + V + + DG+ D G P A V + L+F
Sbjct: 202 RPIDLKKGVHFGQAIHLE-DGEQHELGVRD-------GEKPTAAIVRDTLDDEGSTLVFV 253
Query: 187 SSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHH 246
+S+ A RL ++ D+ +++ +D + S++L + G A+HH
Sbjct: 254 NSRRNAEAEARRLTSTVEGALTADERDRLADIAAEIRDVSDTETSSDLANAVEEGAAFHH 313
Query: 247 ADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYV------GRDFISL 300
A L + R L+EEA+ L+++ T TLAAGVN P++RV++RD G + +S+
Sbjct: 314 AGLASDHRELVEEAFRDRLLKVVSATPTLAAGVNTPSRRVVVRDWRRYSGEAGGMEPLSV 373
Query: 301 NMYKQMVGRAGRTGLQESGESIMLCKTMQDFLR-FSSMMNAGPEPISSHMDP-PTLVDLI 358
QM GRAGR GL GES++L K+ + F + PEP+ S + P L +
Sbjct: 374 LEVHQMCGRAGRPGLDPYGESLLLAKSHDELDELFDRYIWTEPEPVRSKLAAEPALRTHL 433
Query: 359 LEVVAANLCSSLEDVKTLIKHTLF-YQLKSPEDQQTFLETTLSEIVAS-LLASKGTMLTM 416
L VA+ S + + TL+ Q + +++ L +VA+ L G LT
Sbjct: 434 LATVASGFAGSRSGLLEFLDRTLYATQTDEGGRLERVMDSMLDYLVANDFLERDGDDLTA 493
Query: 417 NEAGH----LSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEY 472
GH L L ++ A + GL H +D L L S
Sbjct: 494 TSLGHTVSRLYLDPMSAAEIVDGLEH-------ADERPTALGLFHLVS------------ 534
Query: 473 RIPSDGILLSRSKVYDRYTKFHPQTLRVAEALGVTENLVALNVTGKLKDEKKALLCRFFH 532
R P L RS + YT + E LG +V + ++ L
Sbjct: 535 RTPDMYELYLRSGDREEYTMIAHE--HETEMLG--------SVPSEFEERWDDWLSALKT 584
Query: 533 ACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELW--CYKQLL 590
A +L D + + + YGI L+ ++ + S R EL W ++
Sbjct: 585 ASMLDDWASELDESTITDRYGIGPGDLRGKVDTAEWLLSAAERLAGELGLEWAPAVREAR 644
Query: 591 TDLPQTLMYCRAPNLRALMDLPGVK-IG--RARQLLNAGYSSLELIARADAKEMVAKIRH 647
T + + L+DL GV+ +G RAR+L G + RAD
Sbjct: 645 TRVAHGIRT-------ELIDLAGVRGVGRKRARRLFENG-----IEGRAD---------- 682
Query: 648 LPLRSARNLISAAKLHFITKMDKVEAMKNLIQNLQKN 684
LR A + L TK +N+++N+ ++
Sbjct: 683 --LRDAEKSVVLGALRGRTKT-----AENVLENVGRS 712
>gi|255071395|ref|XP_002507779.1| hypothetical protein MICPUN_113588 [Micromonas sp. RCC299]
gi|226523054|gb|ACO69037.1| hypothetical protein MICPUN_113588 [Micromonas sp. RCC299]
Length = 1974
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 163/685 (23%), Positives = 282/685 (41%), Gaps = 135/685 (19%)
Query: 100 IQIFAMSATIGNINALSTFIEGITYVENS-RPTKHSEYVTVDKRVFQSFDGKSLT--EIY 156
+Q+ MSAT+ N++AL+ ++ E RP +V V R + + +++ + +
Sbjct: 439 LQVIGMSATLPNLDALARWLGDAALFETDFRPVPLRSHVVVGARAYPVPEREAIEFLDAH 498
Query: 157 ADNLDYS-----------------LTGSGP--------DAVLHLV-----QGNLMVLIFC 186
D LD T S P DAV L +G V++FC
Sbjct: 499 DDPLDAGGARDLCINPSALNHSVPSTSSTPADAGCTELDAVEALASETVRRGGGGVIVFC 558
Query: 187 SSKIACSNLALRL-QFDRFPGTKEYKKQEKEDLIEALKEE---------------NDG-- 228
+++ C +A L Q R PG L++ ++ N G
Sbjct: 559 AARFQCELVARALSQRLRVPGADTETNAPLASLVQDIRRVTGDEPTVHRSDSSMVNRGES 618
Query: 229 -KLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVI 287
+++ L +C GVA+HHA L R L+E + ++Q+ICCT+T+A GVNLPA RV+
Sbjct: 619 MQMNKTLADCAAVGVAWHHAGLHPEARTLVERGFRENSIQVICCTTTMATGVNLPASRVV 678
Query: 288 IRDSYV------GRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAG 341
I +Y G I +QMVGRAGR G GE+ ++ + + + S+M G
Sbjct: 679 IHGAYQYRKGNKGHALIGSRDLQQMVGRAGRAGFATLGEAFVIAPKPNE-IDWRSIM-VG 736
Query: 342 P------------------------EPISSHMDPPTLVDLILEVVAANLCSSLEDVKTLI 377
P + +SS + + ++L+ VA L ++ +++ +
Sbjct: 737 PSNGAQTRDRAAVARELGRRLVSSGDALSSRIAKEGMRRVMLDAVACGLANTPREIRRYV 796
Query: 378 KHTLFYQLKSPEDQQTFLETTLSEIVASLLASKGTMLTMNEAGHLSLTSIAKAAVQAGLS 437
TL L D Q + + +A L T+ + A T++ +AA A L+
Sbjct: 797 ARTLLAALN---DFQDVVAADATAALAWLAHGGFTVWDQH-AFRWEPTALGRAAAAAHLT 852
Query: 438 HDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLE------------------------YR 473
D + + +D+ + L + LH+LFL + E R
Sbjct: 853 PDAAVRVVNDVKLARRRLILESDLHLLFLCVEPEPPVCVGRDATQGGPNETNKGATNRPR 912
Query: 474 IPSDGIL--LSRSKVYDRYTKFHPQTLRVAEALGVTENLVA-------LNVTGKLKDEKK 524
P L +S K+Y+ ++ RVA A+G+ + V +VT + ++++
Sbjct: 913 TPETCSLDEVSFIKIYESLSEHE---SRVANAVGIKADYVEGRLRLGRKDVTPEHGNQRR 969
Query: 525 ALLCRFFHACILYDVLNFDNHQKVAKMYGIQNS-HLQNFLNVTSYFASKVYRFCEELPEL 583
L RF HA L D+++ +H + +G++ S L + +A +V C P
Sbjct: 970 VCL-RFLHALALKDLVSEVDHATIVASFGLKTSARLLSLQESAGRYAGQVASVCG--PMG 1026
Query: 584 WCYKQLLTDLPQTLMYCRA-PNLRALMDLPGVKIGRARQLLNAGYSSLELIARADAKEMV 642
W ++L Q + A + L +P + RAR L N G + E IA +++V
Sbjct: 1027 WGDMEVLVARLQDRITAGAREEILCLTHIPQIGASRARTLYNHGVRTPEAIAALSREDLV 1086
Query: 643 AKIR------HLPLRSARNLISAAK 661
+R P R+A ++ A+
Sbjct: 1087 KILRSRGPFERAPGRAADAILRGAR 1111
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 43/73 (58%), Gaps = 3/73 (4%)
Query: 23 YAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQR 82
+ G +G PP + + + T EK + L+ L+ E+RI E+ +V+DE HM+ + R
Sbjct: 304 FGGQRGALPP---RGGAGGLIVATPEKANDLVTRLVAEDRIHELACVVVDELHMVQDVSR 360
Query: 83 GPILECVVSKVLY 95
G +E +++K+++
Sbjct: 361 GSTVELMLTKLMH 373
>gi|448469049|ref|ZP_21600058.1| DEAD/DEAH box helicase [Halorubrum kocurii JCM 14978]
gi|445809876|gb|EMA59912.1| DEAD/DEAH box helicase [Halorubrum kocurii JCM 14978]
Length = 673
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 108/378 (28%), Positives = 173/378 (45%), Gaps = 36/378 (9%)
Query: 33 TKRQLNKKSIYICTIEKGSKLIGSLIQE--NRIDEIGLIVIDEFHMLNEPQRGPILECVV 90
T L + + T EK + S I+ + +DE+ + +DE H+L +RGP LE +
Sbjct: 113 TGEALAGNDVVVATSEK----VDSAIRNGASWVDELACVAVDEVHLLGAARRGPTLEVTL 168
Query: 91 SKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVENS-RPTKHSEYVTVDKRVFQSFD- 148
+ + +Q+ A+SAT+ N +A++ +++ T VE++ RP V V V SFD
Sbjct: 169 ATLRRRNPELQVVALSATVDNPDAIADWLDA-TLVESAWRPVDLRTGVAVGGDV--SFDD 225
Query: 149 GKSLT--------EIYADNLDYSLTGSGPDA-------VLHLVQGNLMVLIFCSSKIACS 193
G ++T PDA V V L F S+
Sbjct: 226 GTAMTVETGDDAVGGDGGEESEGGDDDPPDATEVTAALVADAVDRGGQCLAFVRSRTEAV 285
Query: 194 NLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTN--LEECILYGVAYHHADLTA 251
LA RL D G + E + + +T L +C+ GVA+HHA L A
Sbjct: 286 ALAERLAAD---GLADRLGVESAAAAAGDEAADVDGTATGSQLADCLRAGVAFHHAGLRA 342
Query: 252 GERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS--YVGR--DFISLNMYKQMV 307
G R ++EEA+ + IC T TLAAGVN+PA+RV++RD Y G +++ QM
Sbjct: 343 GHRAVVEEAFRDREVACICATPTLAAGVNVPARRVVVRDQKRYAGSAMEWLPTLEVHQMC 402
Query: 308 GRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHM-DPPTLVDLILEVVAANL 366
GRAGR GL GE++++ + ++ PE + S + DP +L +L VA
Sbjct: 403 GRAGRPGLDPYGEAVLVGSRDTEAELVERYVDGEPEAVESTLADPASLRTHVLSAVATGF 462
Query: 367 CSSLEDVKTLIKHTLFYQ 384
+ ++ + + T + +
Sbjct: 463 AETEAEILDVFEGTFYAR 480
>gi|170290966|ref|YP_001737782.1| DEAD/DEAH box helicase [Candidatus Korarchaeum cryptofilum OPF8]
gi|170175046|gb|ACB08099.1| DEAD/DEAH box helicase domain protein [Candidatus Korarchaeum
cryptofilum OPF8]
Length = 695
Score = 132 bits (331), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 182/689 (26%), Positives = 310/689 (44%), Gaps = 82/689 (11%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+ +EKY+ ++ +++ + G Y + L K + + T EK L Q
Sbjct: 70 LAYEKYEEFSRVFDKWSVRVS-----IGDYDSSDEPLGKHDLIVMTYEKFDSL-----QR 119
Query: 61 NRIDEIGLIVI---DEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALST 117
+R + + + DE H + +P RGP LE VSK ++ +S +I A+SATI N+ ++
Sbjct: 120 HRSSWLSSVSLLVLDEVHYVGDPSRGPTLEMAVSKFMHENQSRRI-ALSATITNLEEIAD 178
Query: 118 FIEGITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLH--L 175
+++ + + RP V RV +GK IY D + L G G +L L
Sbjct: 179 WLQAVPIRVDWRP--------VPLRVGMYVEGKL---IYPDG-EERLEGEGIIPLLRKCL 226
Query: 176 VQGNLMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDG--KLSTN 233
V+G ++F + + + A +L F + E L+E + + G KL
Sbjct: 227 VEGG-QAIVFYNRRSDAVSWAEKLA-SHFNMSGE--------LLEEVNLSSYGSSKLLEK 276
Query: 234 LEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYV 293
L + GVA+HHA L RR +E A+ G+++I+ T TLAAGVNLPA+ VI+ SY+
Sbjct: 277 LSNVMRRGVAFHHAGLPFELRRAVERAFKRGSVRILTATPTLAAGVNLPARTVIV-SSYM 335
Query: 294 ------GR-DFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPIS 346
GR IS+ + QM GRAGR G GE+ ++ K + R +++ PEPIS
Sbjct: 336 RYNPKLGRMTPISIMEFWQMAGRAGRPGYDPYGEAYIIAKR-SEAKRVFEYISSEPEPIS 394
Query: 347 SHM-DPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQLKSPEDQQTFLETTLSEIVAS 405
S++ D L + +L ++A+ S ++ + K TL Y + FL T+ ++ S
Sbjct: 395 SNLHDTSLLKNHLLALIASMEPISSGEILDIFKRTLLYI----QGGDKFLRRTIPFLLDS 450
Query: 406 LLASKGTMLTMNEAGHLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLF 465
L EAG L + A G +Y D ++ L+ L+ +
Sbjct: 451 L----------KEAGFLQEVRNSYRATSLGRR---ISELYIDTSSAQMMIEALDELNKRY 497
Query: 466 LVIPLEYRIPSDGILLSRSKVYDRYTKFHPQTLRVAEALGVTENLVALNVTGKLKDEKKA 525
V +E +P +L + Y + + LR EA+ + L+ + +
Sbjct: 498 KVEDVE--LPVLHLLCMLPDMPKVYGRGRAELLR--EAIEELDPLIPMEESP--ISSPSE 551
Query: 526 LLCRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELWC 585
LL A L ++ + ++ + G++ L+N + Y F E+ +L+
Sbjct: 552 LLQVMRGALSLKMWISGQSDGEIEEKLGVEPGDLRNLAENGEWLC---YSFS-EISKLFG 607
Query: 586 YKQL---LTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIARADAKEMV 642
K+L L L + Y L +L+ L GV RA+ L AGY ++ IA A+ E +
Sbjct: 608 EKELSEWLRILSMRIRYGVPEELLSLVILKGVGRVRAKLLYEAGYRTVRDIAEAEP-EQL 666
Query: 643 AKIRHLPLRSARNLISAAK-LHFITKMDK 670
+I + + +R L+ A+ L ++ D+
Sbjct: 667 ERIVGIGKQLSRELVDQARSLAYVGSSDR 695
>gi|294811244|ref|ZP_06769887.1| DEAD/DEAH box helicase domain-containing protein [Streptomyces
clavuligerus ATCC 27064]
gi|326439802|ref|ZP_08214536.1| helicase [Streptomyces clavuligerus ATCC 27064]
gi|294323843|gb|EFG05486.1| DEAD/DEAH box helicase domain-containing protein [Streptomyces
clavuligerus ATCC 27064]
Length = 1040
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 117/407 (28%), Positives = 196/407 (48%), Gaps = 45/407 (11%)
Query: 63 IDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKK---SIQIFAMSATIGNINALSTFI 119
+D +G++V+DE H L P+RGP+LE + + + K+ ++QI +SA + + + L+ ++
Sbjct: 408 LDHVGVLVVDEIHALALPERGPLLEMLFTWIKMRKRRGHALQIVGLSAVLDDADGLADWL 467
Query: 120 EGITYVENSRPTKHSEYV-TVDKRVF--------QSFDGKSLTEIYADNLDYSLTGSGPD 170
+ R T E V +D R+ + DG+ E + + S +
Sbjct: 468 DATPVRHEKRETVLREGVIGMDGRLVSRAGPGGDRPEDGEERVEQFLPHAVSSFDQLPVE 527
Query: 171 AVLHLVQGNLMVLIFCSSK----IACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEEN 226
LV+ V++F +++ +LA RL P K +I L + +
Sbjct: 528 LTARLVEEGDQVIVFRATRHDVRTTARSLARRLGL---PSAKT--------VISELPQGD 576
Query: 227 DGKLSTNLEECILYGVAYHHADLTAGERRLIEEAY--LAGTLQIICCTSTLAAGVNLPAQ 284
DG+++ L EC+ GVA+H +DL+ ERRL+E+++ L+++ T+TLA GVNLPA
Sbjct: 577 DGQVNDLLRECLARGVAFHVSDLSDEERRLLEQSFKQPESGLRVLVSTTTLAQGVNLPAD 636
Query: 285 RVII---RDSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRF-SSMMNA 340
V+I G S+ YK M GRAGR GL E G S +L ++ + R + A
Sbjct: 637 SVVICELEHPGTGERKYSVPEYKNMAGRAGRKGLTERGRSFVLAESPLEVQRIRQEYVLA 696
Query: 341 GPEPISSHMDPPTLVDLILEVVAANLCS-------SLEDVKTLIKHTL-FYQLKSPEDQQ 392
P PI S + T DL V++A + E ++ T YQ +
Sbjct: 697 APGPIRSALR-HTATDLRSSVLSAFTGPVAHLGRLTDEGIEEFFTWTFAAYQHRCAPSTA 755
Query: 393 TFLETTLSEIVASLLASKGTMLTMNEAGHLSLTSIAKAAVQAGLSHD 439
F +LS VA L+ S L +++G L+LT + + ++++GLS D
Sbjct: 756 PFPGPSLSTAVAQLIESG--FLEKSDSG-LALTRLGEISIRSGLSVD 799
>gi|440463499|gb|ELQ33079.1| hypothetical protein OOU_Y34scaffold01005g105 [Magnaporthe oryzae
Y34]
gi|440481089|gb|ELQ61709.1| hypothetical protein OOW_P131scaffold01159g15 [Magnaporthe oryzae
P131]
Length = 776
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 108/400 (27%), Positives = 179/400 (44%), Gaps = 50/400 (12%)
Query: 246 HADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGRDFISLNMYKQ 305
A LT+ ER L+ +AY G L+I T++LAAG+NLPA+RVI+ + +GRD + +M +Q
Sbjct: 347 QAGLTSEERDLVAKAYDNGILKICVATASLAAGINLPARRVILHSARMGRDLVGPSMLRQ 406
Query: 306 MVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHM--DPPTLVDLILEVVA 363
M GRAGR G E GE+ + C++ D +M+A +SS + D + +LEV+A
Sbjct: 407 MRGRAGRKGKDEVGETYLCCQS-SDLDNVLGLMHAELPHVSSSLTTDRQRIQRALLEVIA 465
Query: 364 ANLCSSLEDVKTLIKHTLFYQLKSPEDQQTFLETTLSEIVASLLASKGTMLTMNEAGHLS 423
L +S + ++ TL Y ++ +T +ET+L+ + K +TM +
Sbjct: 466 IRLATSRSSLDDYMRKTLLYHSADVKEIETHVETSLANL------EKLKFITMGDFQTYE 519
Query: 424 LTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEYRIPSDGILLSR 483
T + KA V L + I+++L F + LH+L+ P
Sbjct: 520 ATQLGKAIVAGALDPEDGTFIHNELKKALQAFVMDGDLHVLYTFTP-------------- 565
Query: 484 SKVYDRYTKFHPQTLRVAEALGVTENLVALNVTGKLKDEKKALLCRFFHACILYDVLNFD 543
V+D A N+ + E + RF+ A L D+ N
Sbjct: 566 --VHD----------------------FAANINWHEEKELARVYRRFYMALQLRDLCNEM 601
Query: 544 NHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELW-CYKQLLTDLPQTLMYCRA 602
VA+ Y + +QN FA+ + +FCE + W +L L
Sbjct: 602 PVHVVARKYDVPRGTVQNLAQNCQGFAAGMIKFCEHMG--WGAMASVLDHFSDRLKAGAK 659
Query: 603 PNLRALMDLPGVKIGRARQLLNAGYSSLELIARADAKEMV 642
+L +L + +K AR + G+ S+ +A AD +++V
Sbjct: 660 SDLLSLAKIMFIKSRTARVFWDNGFKSVASVANADPEQLV 699
>gi|222479634|ref|YP_002565871.1| DEAD/DEAH box helicase [Halorubrum lacusprofundi ATCC 49239]
gi|222452536|gb|ACM56801.1| DEAD/DEAH box helicase domain protein [Halorubrum lacusprofundi
ATCC 49239]
Length = 662
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 100/387 (25%), Positives = 170/387 (43%), Gaps = 42/387 (10%)
Query: 28 GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE--NRIDEIGLIVIDEFHMLNEPQRGPI 85
G + + L + + T EK + S I+ + +D++ + +DE H+L +RGP
Sbjct: 97 GDFDASGEALAGNDVVVATSEK----VDSAIRNGASWVDDLACVAVDEVHLLGAERRGPT 152
Query: 86 LECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQ 145
LE ++ + +Q+ A+SAT+ N A++ ++ RP V VD V
Sbjct: 153 LEVTLATLRRRNPELQVVALSATVDNPEAIAEWLNATLVKSEWRPVDLRTGVAVDGDV-- 210
Query: 146 SFDGKSLTEIYADNL---------------------DYSLTGSGPDAVLHLVQGNLMVLI 184
+FD + + ++ D +T + V V L
Sbjct: 211 TFDDGTTMTVDVGSVAVDGSGDGDDGDSGDADDPPDDTEITAA---LVADAVDQGGQCLA 267
Query: 185 FCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTN--LEECILYGV 242
F S+ LA RL D G E E + + +T L +C+ GV
Sbjct: 268 FVRSRTEAVGLAERLAAD---GLAERLGVESAAAAAGDEAADVDGTATGRQLADCLRSGV 324
Query: 243 AYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRD----SYVGRDFI 298
A+HHA L AG R ++EEA+ + IC T TLAAG+N+PA+RV++RD + G +++
Sbjct: 325 AFHHAGLRAGHRTVVEEAFRDREVACICATPTLAAGINVPARRVVVRDQKRYAGSGMEWL 384
Query: 299 SLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHM-DPPTLVDL 357
QM GRAGR GL GE++++ + ++ PE + S + DP +L
Sbjct: 385 PTLEVHQMCGRAGRPGLDPYGEAVLVGNRDTEGDLVERYLDGEPEAVESKLADPASLRTH 444
Query: 358 ILEVVAANLCSSLEDVKTLIKHTLFYQ 384
+L VA + ++ + + T + +
Sbjct: 445 VLSAVATGFAETEAEILDVFEGTFYAR 471
>gi|254390292|ref|ZP_05005510.1| DEAD/DEAH box helicase domain-containing protein [Streptomyces
clavuligerus ATCC 27064]
gi|197703997|gb|EDY49809.1| DEAD/DEAH box helicase domain-containing protein [Streptomyces
clavuligerus ATCC 27064]
Length = 1035
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 117/407 (28%), Positives = 196/407 (48%), Gaps = 45/407 (11%)
Query: 63 IDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKK---SIQIFAMSATIGNINALSTFI 119
+D +G++V+DE H L P+RGP+LE + + + K+ ++QI +SA + + + L+ ++
Sbjct: 403 LDHVGVLVVDEIHALALPERGPLLEMLFTWIKMRKRRGHALQIVGLSAVLDDADGLADWL 462
Query: 120 EGITYVENSRPTKHSEYV-TVDKRVF--------QSFDGKSLTEIYADNLDYSLTGSGPD 170
+ R T E V +D R+ + DG+ E + + S +
Sbjct: 463 DATPVRHEKRETVLREGVIGMDGRLVSRAGPGGDRPEDGEERVEQFLPHAVSSFDQLPVE 522
Query: 171 AVLHLVQGNLMVLIFCSSK----IACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEEN 226
LV+ V++F +++ +LA RL P K +I L + +
Sbjct: 523 LTARLVEEGDQVIVFRATRHDVRTTARSLARRLGL---PSAKT--------VISELPQGD 571
Query: 227 DGKLSTNLEECILYGVAYHHADLTAGERRLIEEAY--LAGTLQIICCTSTLAAGVNLPAQ 284
DG+++ L EC+ GVA+H +DL+ ERRL+E+++ L+++ T+TLA GVNLPA
Sbjct: 572 DGQVNDLLRECLARGVAFHVSDLSDEERRLLEQSFKQPESGLRVLVSTTTLAQGVNLPAD 631
Query: 285 RVII---RDSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRF-SSMMNA 340
V+I G S+ YK M GRAGR GL E G S +L ++ + R + A
Sbjct: 632 SVVICELEHPGTGERKYSVPEYKNMAGRAGRKGLTERGRSFVLAESPLEVQRIRQEYVLA 691
Query: 341 GPEPISSHMDPPTLVDLILEVVAANLCS-------SLEDVKTLIKHTL-FYQLKSPEDQQ 392
P PI S + T DL V++A + E ++ T YQ +
Sbjct: 692 APGPIRSALR-HTATDLRSSVLSAFTGPVAHLGRLTDEGIEEFFTWTFAAYQHRCAPSTA 750
Query: 393 TFLETTLSEIVASLLASKGTMLTMNEAGHLSLTSIAKAAVQAGLSHD 439
F +LS VA L+ S L +++G L+LT + + ++++GLS D
Sbjct: 751 PFPGPSLSTAVAQLIESG--FLEKSDSG-LALTRLGEISIRSGLSVD 794
>gi|389846435|ref|YP_006348674.1| ATP-dependent DNA helicase [Haloferax mediterranei ATCC 33500]
gi|448615890|ref|ZP_21664653.1| ATP-dependent DNA helicase [Haloferax mediterranei ATCC 33500]
gi|388243741|gb|AFK18687.1| ATP-dependent DNA helicase [Haloferax mediterranei ATCC 33500]
gi|445752021|gb|EMA03452.1| ATP-dependent DNA helicase [Haloferax mediterranei ATCC 33500]
Length = 639
Score = 131 bits (329), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 119/427 (27%), Positives = 183/427 (42%), Gaps = 31/427 (7%)
Query: 10 AKAAEEFKFYLEEYAGVK-----GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE--NR 62
A A E+++ + +E GV G + + L I + T EK + S I+ +
Sbjct: 75 ALAREKYETF-DELPGVSVGISTGDFDSAEEALGDHDIIVATSEK----VDSAIRNGASW 129
Query: 63 IDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGI 122
++ + +V+DE H+L RGP LE ++ + +Q+ A+SAT+ N A++ +++
Sbjct: 130 VEHLACVVVDEVHLLGALGRGPTLEVTLATLQRRVPDLQLVALSATVDNPEAIAAWLDAE 189
Query: 123 TYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNL---DYSLTGSGPDAVLHLVQGN 179
RP V D+ V FD S E+ D T + V V+
Sbjct: 190 LVESTWRPVSLRTGVYADESV--EFDDDSALEVTVPPTGPNDDEATEATVSLVADAVENG 247
Query: 180 LMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECIL 239
L F S+ LA RL + DL + L E L EC
Sbjct: 248 GQCLAFVRSRREAEALADRLADEDL--------SPAPDLGDELAELGGTTTGRQLSECAR 299
Query: 240 YGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS--YVGRD- 296
GV +HHA L + R +E A+ L +IC T TLAAGVN+PA+RV+IRD Y G
Sbjct: 300 TGVGFHHAGLRSTHRVTVENAFRDRKLSVICATPTLAAGVNVPARRVVIRDQKRYTGESM 359
Query: 297 -FISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHM-DPPTL 354
+I + QM GRAGR L GE++++ + A E ++S D L
Sbjct: 360 AWIPVLDVHQMCGRAGRPHLDPFGEAVLVGDDDTKDELVDRYVTADAEAVNSQFADEEAL 419
Query: 355 VDLILEVVAANLCSSLEDVKTLIKHTLFYQLKSPEDQQTFLETTLSEIVA-SLLASKGTM 413
+L VVA+ SL+ V + T + D + +S++ + LLA G
Sbjct: 420 RTHVLSVVASGFADSLDGVADVFSATYYAHQNPGVDLTELVGDVVSDLESMELLAVDGDS 479
Query: 414 LTMNEAG 420
L+ G
Sbjct: 480 LSATTLG 486
>gi|315231273|ref|YP_004071709.1| ski2-type helicase [Thermococcus barophilus MP]
gi|315184301|gb|ADT84486.1| putative ski2-type helicase [Thermococcus barophilus MP]
Length = 755
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 124/433 (28%), Positives = 196/433 (45%), Gaps = 49/433 (11%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVK-----GQYPPTKRQLNKKSIYICTIEKGSKLIG 55
+ EKY+ EFK + E GV+ G Y ++ L K I I T EK L+
Sbjct: 101 LAEEKYR-------EFKTW--EDLGVRVAVTTGDYDSSEEWLGKYDIIIATSEKFDSLLR 151
Query: 56 SLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINAL 115
+ I ++ LIV DE H+L RG LE ++S +L QI +SAT+GN L
Sbjct: 152 H--KSRWIRDVTLIVADEIHLLGSYDRGATLEMILSHML---GKAQILGLSATVGNAEEL 206
Query: 116 STFIEGITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHL 175
+ ++ V + RP K + V ++ DGK + + D V+
Sbjct: 207 AEWLNAKLVVSDWRPVKLRKGVFAHGQLIWE-DGK--VDKFPPQWD--------SLVIDA 255
Query: 176 VQGNLMVLIFCSSKIACSNLALRLQFDRFPGTKEYK---KQEKEDLIEALKEENDGKLST 232
V+ L+F +++ + A L G K + K E L E + +
Sbjct: 256 VKKGKQALVFVNTRRSAEKEAGML------GKKVRRLLTKPEARRLKELAESLESNPTND 309
Query: 233 NLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRD-- 290
L+E ++ G A+HHA L ER LIE+A+ G ++++ T TLA GVNLP+ RVIIRD
Sbjct: 310 KLKEVLVNGAAFHHAGLGRAERTLIEDAFREGLIKVLTATPTLAMGVNLPSFRVIIRDTK 369
Query: 291 --SYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSH 348
S G I + +QM+GRAGR + GE+I++ KT + + PE + S
Sbjct: 370 RYSTFGWSDIPVLEIQQMIGRAGRPKYDKEGEAIIVAKTEKPEELMEKYIFGKPEKLFSM 429
Query: 349 M-DPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFY-QLKSPEDQQTFLETTLSEIVASL 406
+ + +L ++ S ++ ++ T +Y Q K E LE IV L
Sbjct: 430 LSNDAAFRSQVLALITNFGVESFRELIGFLEKTFYYHQRKDLE----ILEGKAKSIVYFL 485
Query: 407 LASKGTMLTMNEA 419
L ++ + +N++
Sbjct: 486 LENEFIDIDLNDS 498
>gi|367003825|ref|XP_003686646.1| hypothetical protein TPHA_0G03720 [Tetrapisispora phaffii CBS 4417]
gi|357524947|emb|CCE64212.1| hypothetical protein TPHA_0G03720 [Tetrapisispora phaffii CBS 4417]
Length = 1151
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 116/362 (32%), Positives = 185/362 (51%), Gaps = 33/362 (9%)
Query: 39 KKSIYICTIEKGSKLIGSLIQENRI-DEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLK 97
K ++ I T EK +L +R+ D I LI++DE H+L + RG ILE V++++ Y
Sbjct: 213 KSNVIITTPEKWDQLTRKWEDYSRLFDLIKLILVDEIHILKD-NRGAILEVVLTRMNYRY 271
Query: 98 KSIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYA 157
I+I A+SATI NIN ++ +++ + V P + + D Q K + I++
Sbjct: 272 PDIRIVAVSATIPNINDIAVWLK--SNVNRQNP---ALVLDFDDSYRQVALKKYVYGIFS 326
Query: 158 DNL-DY---SLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRLQFD-RFPGTKEYKK 212
N DY + S D V + +LIFC ++ + ++ A + + R+ +E
Sbjct: 327 SNKNDYQKDAFYNSKLDEVFYNHGKKKPILIFCPTRSSTASTAKYIGHESRY--MEEMSV 384
Query: 213 QEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCT 272
+K + + L EC GV +HHA L+ +RRL+EE YL GT++I+C T
Sbjct: 385 NKKSVIFD----------DHTLNECYNNGVLFHHAGLSLEDRRLVEETYLDGTIKILCST 434
Query: 273 STLAAGVNLPAQRVIIRD----SYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTM 328
+TLA G+NLPA VII+ S G D S QM+GRAGR + G +++L T
Sbjct: 435 TTLAVGINLPAYLVIIKGTKMWSISGNDEYSELDILQMLGRAGRPQYENEGCAVILTDTT 494
Query: 329 QDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFY--QLK 386
+ ++S+++N G E + S + L L E ++ C SL+ +K T FY LK
Sbjct: 495 KK-EKYSNLIN-GCENLESRLHLNLLEHLCAE-ISLKTCHSLDSFIEWLKSTFFYVRYLK 551
Query: 387 SP 388
+P
Sbjct: 552 AP 553
>gi|340905025|gb|EGS17393.1| ATP-dependent helicase-like protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 887
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 113/408 (27%), Positives = 188/408 (46%), Gaps = 23/408 (5%)
Query: 246 HADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGRDFISLNMYKQ 305
A LT ER L+ +AY G L++ T +LAAG+NLPA+RVI+ ++ VGRD + M +Q
Sbjct: 439 QAGLTTEERELVAKAYDEGVLKVCVATCSLAAGINLPARRVILHNARVGRDLVGPAMLRQ 498
Query: 306 MVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHM--DPPTLVDLILEVVA 363
M GRAGR G E GE+ + C+ D +M+A ISS + D + +LE++A
Sbjct: 499 MRGRAGRKGKDEVGETYLCCRK-SDLEAVIDLMHADLPQISSCLISDKRRIQRALLEIIA 557
Query: 364 ANLCSSLEDVKTLIKHTLFYQLKSPEDQQTFLETTLSEIVASLLASKGTMLTMNEA-GHL 422
L +S I T+ P + Q +E +L+++ + +T++E G
Sbjct: 558 IRLATSRGSFDDYISKTMLSLTADPTEIQEHVEASLADL------QEMEFITVDERDGTY 611
Query: 423 SLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEYRIPSDGILLS 482
T + KA V + L+ + + I+ +L F L +H L+ P++ + ++
Sbjct: 612 QATQLGKAVVASSLNLEDGIFIHKELKAALQAFVLDGEMHALYNFTPVQ---DLGSVPIN 668
Query: 483 RSKVYDRYTKFHPQTLRVAEALGVTENLVALNVTG----KLKDEKKAL---LCRFFHACI 535
++ + LRV LG+ V+ + G + E+K L RF+ A
Sbjct: 669 WRVFWNEMQQLDESGLRVMRFLGLKHATVSRMLQGGTLSESTPEEKELSRRYHRFYLALQ 728
Query: 536 LYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELW-CYKQLLTDLP 594
L D+ N +VAK Y + +Q+ FA+ + +FCE + W L
Sbjct: 729 LRDLCNEIPIHRVAKKYDMPRGFVQSLAQTCKGFAAGMIKFCETMG--WGAMAAALDHFF 786
Query: 595 QTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIARADAKEMV 642
L +L AL + VK AR G+ ++ +A AD +E++
Sbjct: 787 DRLEAEARSDLLALAKITLVKSHTARVFWENGFKTVAAVANADPQELL 834
>gi|448737705|ref|ZP_21719741.1| ski2-like helicase [Halococcus thailandensis JCM 13552]
gi|445803502|gb|EMA53797.1| ski2-like helicase [Halococcus thailandensis JCM 13552]
Length = 743
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 176/697 (25%), Positives = 287/697 (41%), Gaps = 98/697 (14%)
Query: 15 EFKFYLEEYA---GVK-GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENR--IDEIGL 68
EF+ + E+Y GV G Y L I + T EK + SL++ + ID++
Sbjct: 87 EFETF-EQYGLTVGVSTGNYDSDGEWLATCDIIVATSEK----VDSLVRNDAPWIDQLSC 141
Query: 69 IVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVENS 128
+V DE H++++ RGP LE ++K+ +Q A+SATIGN L+ +++
Sbjct: 142 VVADEVHLVDDGHRGPTLEVTLAKLRQRNPGLQTVALSATIGNPEILADWLDAELVDSTW 201
Query: 129 RPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDA--VLHLVQGNLMVLIFC 186
RP + V + + DG+ D G P A V + L+F
Sbjct: 202 RPIDLKKGVHFGQAIHLE-DGEQHELGVRD-------GEKPTAAIVRDTLADEGSTLVFV 253
Query: 187 SSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHH 246
+S+ A RL ++ D+ +++ +D + S +L + + G A+HH
Sbjct: 254 NSRRNAEAEARRLTSTVEGALTADERDRLADIAAEIRDVSDTETSADLADAVEEGAAFHH 313
Query: 247 ADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYV------GRDFISL 300
A L + R L+EEA+ L+++ T TLAAGVN P++RV++RD G + +S+
Sbjct: 314 AGLASDHRELVEEAFRDRLLKVVSATPTLAAGVNTPSRRVVVRDWRRYSGEAGGMEPLSV 373
Query: 301 NMYKQMVGRAGRTGLQESGESIMLCKTMQDFLR-FSSMMNAGPEPISSHMDP-PTLVDLI 358
QM GRAGR GL GES++L K+ + F + PEP+ S + P L +
Sbjct: 374 LEVHQMCGRAGRPGLDPYGESLLLAKSHDELDELFDRYIWTEPEPVRSKLAAEPALRTHL 433
Query: 359 LEVVAANLCSSLEDVKTLIKHTLF-YQLKSPEDQQTFLETTLSEIVAS-LLASKGTMLTM 416
L VA+ S + + TL+ Q + +++ L +VA+ L G LT
Sbjct: 434 LATVASGFAGSRSGLLEFLDRTLYATQTDEGGRLERVMDSMLDYLVANDFLERDGDDLTA 493
Query: 417 NEAGH----LSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEY 472
GH L L ++ A + GL +D L L S
Sbjct: 494 TSLGHTVSRLYLDPMSAAEIVDGLES-------ADERPTALGLFHLVS------------ 534
Query: 473 RIPSDGILLSRSKVYDRYTKFHPQTLRVAEALGVTENLVALNVTGKLKDEKKALLCRFFH 532
R P L RS + YT + E LG +V + ++ L
Sbjct: 535 RTPDMYELYLRSGDREEYTMIAHE--HETEFLG--------SVPSEFEERWDDWLSALKT 584
Query: 533 ACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELW--CYKQLL 590
A +L D + + + YGI L+ ++ + S R EL W ++
Sbjct: 585 ASMLDDWASELDESTITDRYGIGPGDLRGKVDTAEWLLSAAERLAGELGLEWAPAVREAR 644
Query: 591 TDLPQTLMYCRAPNLRALMDLPGVK-IG--RARQLLNAGYSSLELIARADAKEMVAKIRH 647
T + + L+DL GV+ +G RAR+L G + RAD
Sbjct: 645 TRVAHGIRT-------ELIDLAGVRGVGRKRARRLFETGIET-----RAD---------- 682
Query: 648 LPLRSARNLISAAKLHFITKMDKVEAMKNLIQNLQKN 684
LR+A + L TK +N+++N+ ++
Sbjct: 683 --LRNAEKSVVLGALRGRTKT-----AENVLENVGRS 712
>gi|340992725|gb|EGS23280.1| pre-mRNA splicing helicase-like protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 2205
Score = 130 bits (327), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 129/490 (26%), Positives = 237/490 (48%), Gaps = 61/490 (12%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V E+ + K E + + E G + TK+Q+++ + + T EK +
Sbjct: 595 LVQEQVGNFGKRLEPYGIKVSELTGDRQL---TKQQISETQVIVTTPEKWDVITRKATDI 651
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVL----YLKKSIQIFAMSATIGNINALS 116
+ + + LI+IDE H+L++ RGP+LE +VS+ + + ++I +SAT+ N ++
Sbjct: 652 SYTNLVRLIIIDEIHLLHD-DRGPVLESIVSRTIRRTEQTGEPVRIIGLSATLPNYRDVA 710
Query: 117 TFI-----EGITYVENS-RPTK-HSEYVTV-DKRVFQSFDGKSLTEI-YADNLDYSLTGS 167
+F+ +G+ Y + S RP E++ V DK+ + K++ +I Y L+
Sbjct: 711 SFLRVDFEKGLFYFDGSYRPCPLRQEFIGVTDKKAIKQL--KTMNDITYQKVLE------ 762
Query: 168 GPDAVLHLVQGNLMVLIFCSSKIACSNLA--LR---LQFDRFPGTKEYKKQEKEDLIEAL 222
H+ Q +LIF S+ + A +R L+ D ++ +E L EA
Sbjct: 763 ------HVGQNRNQMLIFVHSRKETAKTAKYIRDKALEMDTINQILKHDAGTREVLQEAA 816
Query: 223 KEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLP 282
N+ T+L++ + YG HHA ++ +R +E+ + +G +Q++ CT+TLA GVNLP
Sbjct: 817 SSVNN----TDLKDLLPYGFGIHHAGMSRADRTDVEDLFASGHIQVLVCTATLAWGVNLP 872
Query: 283 AQRVIIRDSYV----GRDFISLNMYK--QMVGRAGRTGLQESGESIMLCKTMQDFLRFSS 336
A VII+ + V ++ L+ QM+GRAGR GE I++ T + + S
Sbjct: 873 AHTVIIKGTQVYSPEKGSWVELSPQDVLQMLGRAGRPQYDTYGEGIIIT-TQGEIPYYLS 931
Query: 337 MMNAGPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQ-LKSPE------ 389
++N PI S + + L E+V N+ + E V+ L LF + L+SP
Sbjct: 932 LLNQQ-LPIESQLVSKLVDSLNAEIVLGNVRNRDEGVEWLGYTYLFVRMLRSPGLYSVGA 990
Query: 390 --DQQTFLETTLSEIV--ASLLASKGTMLTMNE-AGHLSLTSIAKAAVQAGLSHDVCLII 444
+ LE +++ A+++ K ++ +E G + T + + A +SH+ +
Sbjct: 991 EYEDDVALEQKRVDLIHSAAMVLKKSNLIKYDEKTGKMQATELGRIASHYYISHE-SMDT 1049
Query: 445 YSDLLHNKLN 454
Y+ L+H +N
Sbjct: 1050 YNKLIHPAMN 1059
Score = 44.3 bits (103), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 74/349 (21%), Positives = 146/349 (41%), Gaps = 58/349 (16%)
Query: 63 IDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKS----IQIFAMSATIGNINALSTF 118
+ + L + D+ HML Q G I E VVS++ +++ ++I +S ++ N + +
Sbjct: 1497 VQTVELFIADDLHMLGG-QMGYIYEIVVSRMHFIRTQTELPMRIVGLSVSLANARDIGEW 1555
Query: 119 IEGITY-VENSRPTKHSEYVTVDKRVFQSFD---GKSLTEIYADNLDYSLTGSGPDAVLH 174
I+ + + N P H V ++ + QS+ SL A ++T PD
Sbjct: 1556 IDAKKHDIYNFSP--HVRPVPLELHI-QSYTIPHFPSLMLAMAKPTYLAITQLSPDQP-- 1610
Query: 175 LVQGNLMVLIFCSSKIACSNLALRL--------QFDRFPGTKEYKKQEKEDLIEALKEEN 226
++F S+ A L DRF + + L++ ++EE
Sbjct: 1611 -------AIVFVPSRKQTRATARDLLTACLADDDEDRF---LHVEVDQIRKLLDHVQEEA 1660
Query: 227 DGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRV 286
L E + +GV Y+H L+ ++R+++ Y G +Q++ + + ++ A V
Sbjct: 1661 -------LAEALSHGVGYYHEALSQSDKRIVKHLYNNGAIQVLIASRDVCWELDFTAHLV 1713
Query: 287 IIRDS--YVGRDF----ISLNMYKQMVGRAGRTGLQESGES-----IMLCKTMQDFLRFS 335
++ + + G++ L+ QM G+A LQ S + +ML +++ +
Sbjct: 1714 VVMGTQFFEGKEHRYIDYPLSEVLQMFGKA----LQPSKDGRSRGVLMLPAVKREY--YK 1767
Query: 336 SMMNAGPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQ 384
+N P+ SH+ L D + ++ + S ED T FY+
Sbjct: 1768 KFLNEA-LPVESHLH-NFLPDAFVTEISTKMIESGEDAINWATFTYFYR 1814
>gi|312136909|ref|YP_004004246.1| dead/deah box helicase domain-containing protein [Methanothermus
fervidus DSM 2088]
gi|311224628|gb|ADP77484.1| DEAD/DEAH box helicase domain protein [Methanothermus fervidus DSM
2088]
Length = 668
Score = 130 bits (327), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 106/386 (27%), Positives = 190/386 (49%), Gaps = 40/386 (10%)
Query: 63 IDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGI 122
+ ++ L+V+DEFHML + RGPILEC ++K L I+I A+SAT+ N++ ++ +++
Sbjct: 121 LSDVDLLVVDEFHMLGDYSRGPILECAITKAKKLNPGIRIIALSATLKNMHEIAKWLDAE 180
Query: 123 TYVENSRPTK-HSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLM 181
+ + RP H + + V+ ++ + D V L++ +
Sbjct: 181 VFEHDYRPVPLHKDVLVVENHNVRNKN---------------------DLVFKLLKKSRQ 219
Query: 182 VLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLST--NLEECIL 239
+L+F S++ +LA + + ++++K K+ ++E K + T L +C+
Sbjct: 220 MLVFVSTRRFTESLANYVA-KKLQNREKFEKIAKK-ILEVPKSKGSPPTPTCKKLAKCVK 277
Query: 240 YGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRD----SYVGR 295
GVA+HHA L +R +IEE + G L +I T TL GVNLP+Q V+IRD + G
Sbjct: 278 KGVAFHHAGLFNEQRSIIEEEFKKGNLLMITATPTLMYGVNLPSQVVVIRDYKRWTPTGI 337
Query: 296 DFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLR-FSSMMNAGPEPISSHM--DPP 352
I + Y+QM GRAGR + G S ++ KT ++ + + + E S + +
Sbjct: 338 QNIPIFDYEQMSGRAGRPQYDKKGYSYLIAKTNEEAEKLYEYYIEGDIEETRSQLLDNKD 397
Query: 353 TLVDLILEVVAANLCSSLEDVKTLIKHTL-FYQLKSPEDQQTFLETTLSEIVASLLASKG 411
+L I+ +A+ C + D+ T YQ+K + LE + + + LL S
Sbjct: 398 SLCKQIIGQIASG-CRDINDIIEFFSDTFCGYQIK--KFSYDALEYEIEDALDFLLDS-- 452
Query: 412 TMLTMNEAGHLSLTSIAKAAVQAGLS 437
++ M AG +T + + A ++ S
Sbjct: 453 DLIKMTSAG-FKITKLGELASKSNYS 477
>gi|358340160|dbj|GAA48113.1| DNA polymerase theta subunit [Clonorchis sinensis]
Length = 1956
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 113/423 (26%), Positives = 174/423 (41%), Gaps = 107/423 (25%)
Query: 66 IGLIVIDEFHMLNEPQRG----------------------------PILECVVSKVLYLK 97
+GL+++DE H++ + RG P + ++
Sbjct: 48 LGLVIVDELHLIGDAHRGYLLELLLTKLLVHSRRVRQESQVDSSLFPSQSSLATQSSRKF 107
Query: 98 KSIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYV-TVDKR--------VFQSFD 148
K +QI MSAT+ N+ L +++ Y RP +E+V + D R V +S
Sbjct: 108 KGVQIVGMSATLPNLGLLGDWLDAAVYTTTFRPVPLTEFVFSRDSRTSVNHAYLVARSDS 167
Query: 149 GKS--------------LTEIYADNLDYSLTGSG------PDAVLHLVQGNLM----VLI 184
+S L + LD L+ D V L L+ VL+
Sbjct: 168 PQSHHALRSGSNVGSERLQPVSTPLLDSQLSAEAHLTSVDEDGVFSLCLDTLLTGHGVLV 227
Query: 185 FCSSKIACSNLALRLQFDRFPGTKEY---KKQEKEDLIEALKEEN--------------- 226
FC +K C LA + F T+ Y K+ E L + +++
Sbjct: 228 FCPTKQWCEQLADSMAKHIFTITQSYFLAKEDENTRLPQTARKDEITMTTPGEFGSIGFR 287
Query: 227 --------------------DGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTL 266
L +L C+ Y VA+HHA LT ER ++E + +G +
Sbjct: 288 LAARLNRSGLMGCVERLRQCPAGLDPSLARCLGYAVAFHHAGLTVEEREVVESGFRSGII 347
Query: 267 QIICCTSTLAAGVNLPAQRVIIRDSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCK 326
+I+ TSTL++GVNLPA+RVIIR + YKQM GRAGR G+ SG+SI+LCK
Sbjct: 348 RILVATSTLSSGVNLPARRVIIRTPLFHGQILDYLCYKQMAGRAGRQGVDTSGQSILLCK 407
Query: 327 TMQDFLRFSSMMNAG-PEPISSHMDP------PTLVDLILEVVAANLCSSLEDVKTLIKH 379
+D R +++AG P S MD T +LEV+A S++ + + +
Sbjct: 408 P-RDLPRVRQLISAGMPAVHSCLMDAFGGSAESTFKRALLEVIANGFISNVAEARHYLSS 466
Query: 380 TLF 382
TL
Sbjct: 467 TLM 469
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 103/237 (43%), Gaps = 21/237 (8%)
Query: 421 HLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEYRIPSDGIL 480
L T++ +A + + L L+++ +L + + L LH+++L+ P+ + G
Sbjct: 581 QLKPTALGRAVLSSSLGPTHGLVVFEELDRAQRSLALDTDLHLIYLLTPVYLDV---GAG 637
Query: 481 LSRSKVYDRYTKFHPQTLRVAEALGVTENLVALNVTGKL--------------KDEKKAL 526
L + + Y P RVA+ +G+ E + G E+ AL
Sbjct: 638 LDWFRYLEHYQSLSPADRRVADLIGIEERFITRCAAGASTSSNTSTRPGASASNSERVAL 697
Query: 527 LCRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELWCY 586
RF+ A LY ++ D VA+ +G+ LQ+ S +A V FC L W +
Sbjct: 698 HRRFYTALTLYRLVCEDGLGTVAEQFGVNRGLLQSLQQQASTYAGMVTIFCNRLG--WIH 755
Query: 587 -KQLLTDLPQTLMYCRAPNLRALMD-LPGVKIGRARQLLNAGYSSLELIARADAKEM 641
++LL L Y A L L+ LP V RAR L GY+S+ +A A +++
Sbjct: 756 LERLLAGFQSRLFYGVAEELVDLVRLLPLVNAQRARALYAGGYTSVSAVANAKPRDL 812
>gi|167043918|gb|ABZ08606.1| putative DEAD/DEAH box helicase [uncultured marine crenarchaeote
HF4000_APKG3H9]
Length = 711
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 109/333 (32%), Positives = 166/333 (49%), Gaps = 31/333 (9%)
Query: 37 LNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKV--- 93
L I I T EK L+ + ID+IGL++ DE H++ + RGP LE ++++
Sbjct: 115 LKNSDILILTNEKMDSLM--RFSPSWIDDIGLVISDEIHLVGDEGRGPTLEMILTRFKLG 172
Query: 94 LYLKKSIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYV----TVDKRVFQSFDG 149
L KS QI A+SATI N + L+ ++E RP SE V TV + +S+
Sbjct: 173 LAGNKS-QIIALSATITNYDELAEWLECKPVESKWRPVPLSEAVYDDFTVKNQERESY-- 229
Query: 150 KSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRLQ--FDRFPGT 207
+I D++ G G D+V + Q L+F ++ + LA+ ++ G+
Sbjct: 230 ----KINFDSVGLPSIGLGIDSVKNGGQS----LLFAMTRPSSVKLAMDSGKYIEKKLGS 281
Query: 208 KEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQ 267
KE + K + L +L L + GVA+HHA L R +IE + G ++
Sbjct: 282 KELAELGKISK-KILSNNEQTELIKKLASVVKQGVAFHHAGLNQNCREIIETEFRNGKIK 340
Query: 268 IICCTSTLAAGVNLPAQRVII------RDSYVGRDFISLNMYKQMVGRAGRTGLQESGES 321
++ T TLAAGVNLPA+RV+I + G IS+ YKQ+ GRAGR + GES
Sbjct: 341 LLSATPTLAAGVNLPARRVVISSILRYNSKFGGNSPISVLEYKQLCGRAGRPQYDKEGES 400
Query: 322 IMLCKTM-QDFLRFSSMMNAGPEPISSHMDPPT 353
I++ K + QD L ++ PEPI S + P+
Sbjct: 401 IIIAKQIPQDDL-LEHYVDGEPEPIESKITEPS 432
>gi|167042655|gb|ABZ07376.1| putative DEAD/DEAH box helicase [uncultured marine crenarchaeote
HF4000_ANIW133M9]
Length = 711
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 109/333 (32%), Positives = 166/333 (49%), Gaps = 31/333 (9%)
Query: 37 LNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKV--- 93
L I I T EK L+ + ID+IGL++ DE H++ + RGP LE ++++
Sbjct: 115 LKNSDILILTNEKMDSLM--RFSPSWIDDIGLVISDEIHLVGDEGRGPTLEMILTRFKLG 172
Query: 94 LYLKKSIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYV----TVDKRVFQSFDG 149
L KS QI A+SATI N + L+ ++E RP SE V TV + +S+
Sbjct: 173 LAGNKS-QIIALSATITNYDELAEWLECKPVESKWRPVPLSEAVYDDFTVKNQERESY-- 229
Query: 150 KSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRLQ--FDRFPGT 207
+I D++ G G D+V + Q L+F ++ + LA+ ++ G+
Sbjct: 230 ----KINFDSVGLPSIGLGIDSVKNGGQS----LLFAMTRPSSVKLAMDSGKYIEKKLGS 281
Query: 208 KEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQ 267
KE + K + L +L L + GVA+HHA L R +IE + G ++
Sbjct: 282 KELAELGKISK-KILSNNEQTELIKKLASVVKQGVAFHHAGLNQNCREIIETEFRNGKIK 340
Query: 268 IICCTSTLAAGVNLPAQRVII------RDSYVGRDFISLNMYKQMVGRAGRTGLQESGES 321
++ T TLAAGVNLPA+RV+I + G IS+ YKQ+ GRAGR + GES
Sbjct: 341 LLSATPTLAAGVNLPARRVVISSILRYNSKFGGNSPISVLEYKQLCGRAGRPQYDKEGES 400
Query: 322 IMLCKTM-QDFLRFSSMMNAGPEPISSHMDPPT 353
I++ K + QD L ++ PEPI S + P+
Sbjct: 401 IIIAKQIPQDDL-LEHYVDGEPEPIESKITEPS 432
>gi|448731473|ref|ZP_21713773.1| ski2-like helicase [Halococcus saccharolyticus DSM 5350]
gi|445792226|gb|EMA42838.1| ski2-like helicase [Halococcus saccharolyticus DSM 5350]
Length = 744
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 168/662 (25%), Positives = 277/662 (41%), Gaps = 82/662 (12%)
Query: 15 EFKFYLEEYA---GVK-GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENR--IDEIGL 68
EF+ + EEY GV G Y L I + T EK + SL++ + ID++
Sbjct: 87 EFEAF-EEYGLSVGVSTGNYESDGEWLATCDIIVATSEK----VDSLVRNDAPWIDDLSC 141
Query: 69 IVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVENS 128
+V DE H++++ RGP LE ++K+ +Q+ A+SATIGN L+ +++
Sbjct: 142 VVSDEVHLVDDGHRGPTLEVTLAKLRQRNPGLQVVALSATIGNPEILAEWLDAELVDSTW 201
Query: 129 RPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDA--VLHLVQGNLMVLIFC 186
RP + V + + Q DG+ D G P A V + L+F
Sbjct: 202 RPIDLKKGVHYGQAI-QLEDGEQHELGVRD-------GEKPTAAIVRDTLDDGGSTLVFV 253
Query: 187 SSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHH 246
+S+ A RL + +++ D+ +++ +D + S +L + G A+HH
Sbjct: 254 NSRRNAEAAARRLADTVESRLTDEERERLADVAAEIRDVSDTETSEDLASAVERGAAFHH 313
Query: 247 ADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIR------DSYVGRDFISL 300
A L + R L+E+A+ L+++ T TLAAGVN P++RV++R + G +S+
Sbjct: 314 AGLASDHRELVEDAFRERALKVVSATPTLAAGVNTPSRRVVVRDWRRYDGAAGGMKPLSV 373
Query: 301 NMYKQMVGRAGRTGLQESGESIMLCKTMQDFLR-FSSMMNAGPEPISSHMDP-PTLVDLI 358
QM GRAGR GL GE+++L + + F + PEP+ S + P L +
Sbjct: 374 LEVHQMCGRAGRPGLDPYGEALLLANSHDELDELFDRYIWTEPEPVRSKLAAEPALRTHL 433
Query: 359 LEVVAANLCSSLEDVKTLIKHTLFYQLKSPEDQQTFLETTLSE-----IVASLLASKGTM 413
L VA+ SS + + TL+ + D+ LE + +V L G
Sbjct: 434 LATVASGFASSRSGLLEFLDRTLY---ATQTDESGRLERVTDDVLDYLVVNDFLDRNGED 490
Query: 414 LTMNEAGH----LSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIP 469
L GH L L ++ A + GL +D + L L S
Sbjct: 491 LQATSLGHTVSRLYLDPMSAAEIVDGLR-------AADDRPSALGLFHLAS--------- 534
Query: 470 LEYRIPSDGILLSRSKVYDRYTKFHPQTLRVAEALGVTENLVALNVTGKLKDEKKALLCR 529
R P L RS + YT + R E LG +V + +D + L
Sbjct: 535 ---RTPDMYELYLRSGDSEEYTMLAHE--RETELLG--------SVPSEFEDRWEDWLSA 581
Query: 530 FFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELW--CYK 587
A +L D + + ++ YGI L+ ++ + S R EL W +
Sbjct: 582 LKTARMLEDWASELDEGEITDRYGIGPGDLRGKVDTAEWLLSAAERLAGELGLEWAPAVR 641
Query: 588 QLLTDLPQTLMYCRAPNLRALMDLPGVK-IG--RARQLLNAGYSSLELIARADAKEMVAK 644
+ T + + L+DL GV+ +G RAR+L G + + AD ++
Sbjct: 642 EARTRVQHGIQS-------ELIDLAGVRGVGRKRARRLFETGIETRADLRNADKPVVLGA 694
Query: 645 IR 646
+R
Sbjct: 695 LR 696
>gi|398015736|ref|XP_003861057.1| DNA polymerase theta (helicase domain only), putative [Leishmania
donovani]
gi|322499281|emb|CBZ34354.1| DNA polymerase theta (helicase domain only), putative [Leishmania
donovani]
Length = 2240
Score = 129 bits (325), Expect = 4e-27, Method: Composition-based stats.
Identities = 68/143 (47%), Positives = 92/143 (64%), Gaps = 3/143 (2%)
Query: 231 STNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRD 290
++ L E I +GVA+HH L A ER LIE A+ ++I+CCTSTLAAGVNLPA+RVII+
Sbjct: 1626 ASQLSEVIAFGVAFHHGGLLAEERDLIETAFRRKHIRILCCTSTLAAGVNLPARRVIIKT 1685
Query: 291 SYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHM- 349
YVGR+F++ + Y QM GRAGR GL GES +L + +D R ++M+A EP S +
Sbjct: 1686 PYVGREFLTKSRYLQMCGRAGRAGLDTYGESFLLLSS-RDQARGHALMHAAVEPCCSKLL 1744
Query: 350 -DPPTLVDLILEVVAANLCSSLE 371
D TL +LE V L + +
Sbjct: 1745 EDDQTLTRSLLECVGVGLVADFQ 1767
Score = 73.9 bits (180), Expect = 3e-10, Method: Composition-based stats.
Identities = 35/101 (34%), Positives = 57/101 (56%), Gaps = 4/101 (3%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+ EK +L + F ++ + G G++P ++Y+CTIEK + L+ +++E
Sbjct: 1306 LAEEKTMALQPLTTAYDFNVDGHYGSSGRFP----LCGAPAVYVCTIEKANSLLNHMLEE 1361
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQ 101
R DEIG +V+DE HM+ E RG LE +SKVL + + Q
Sbjct: 1362 GRADEIGAVVVDELHMVGESGRGATLELFLSKVLVINAARQ 1402
Score = 72.0 bits (175), Expect = 1e-09, Method: Composition-based stats.
Identities = 73/272 (26%), Positives = 129/272 (47%), Gaps = 21/272 (7%)
Query: 420 GHLSLTSIAKAAVQAGLSHDVCLIIYSDLLH-NKLNFCLLNSLHMLFLVIPLEYRIPSDG 478
+ +TS ++V++ S + L++ ++L L + LH+ + + PL D
Sbjct: 1954 AQVHVTSFGSSSVRSCFSVEEALLLRAELDELRHTGLILSDDLHLCYFLTPLREVGKCDW 2013
Query: 479 ILLSRSKVYDRYTKFHPQTLRVAEALGVTENLV---ALNVTGKLK---DEKKALLC--RF 530
LL ++ R+A LGV V A+ + G L+ + ++ L RF
Sbjct: 2014 ELLRL-----MMSRMSDSRQRIASLLGVDAYFVDQQAMGLGGPLQATEEGRRRLFTARRF 2068
Query: 531 FHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELWCYKQLL 590
+ A +L DVL V + Y + LQN + S F+S + FC + E + + +L
Sbjct: 2069 YVALMLADVLAEVPMATVEQRYNVSRGQLQNLMRSASMFSSSITSFCHAM-EWFSLEAVL 2127
Query: 591 TDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIARADAKEMVAKIRHLPL 650
+ + L + P+L LM++ G++ RAR L NAG+ + IA ADA +MV+K++ +
Sbjct: 2128 SSFVKRLGFGVKPDLLPLMEIRGMQPPRARALWNAGFKKVAAIAAADADDMVSKVKLMNP 2187
Query: 651 RSARNLISAAKLHFITKMDKVEAMKNLIQNLQ 682
+ ++ AAK F TK + A++ LQ
Sbjct: 2188 KDSK----AAK--FFTKRSALMAIREANLALQ 2213
>gi|146087487|ref|XP_001465838.1| putative DNA polymerase theta (helicase domain only) [Leishmania
infantum JPCM5]
gi|134069938|emb|CAM68267.1| putative DNA polymerase theta (helicase domain only) [Leishmania
infantum JPCM5]
Length = 2240
Score = 129 bits (325), Expect = 4e-27, Method: Composition-based stats.
Identities = 68/143 (47%), Positives = 92/143 (64%), Gaps = 3/143 (2%)
Query: 231 STNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRD 290
++ L E I +GVA+HH L A ER LIE A+ ++I+CCTSTLAAGVNLPA+RVII+
Sbjct: 1626 ASQLSEVIAFGVAFHHGGLLAEERDLIETAFRRKHIRILCCTSTLAAGVNLPARRVIIKT 1685
Query: 291 SYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHM- 349
YVGR+F++ + Y QM GRAGR GL GES +L + +D R ++M+A EP S +
Sbjct: 1686 PYVGREFLTKSRYLQMCGRAGRAGLDTYGESFLLLSS-RDQARGHALMHAAVEPCCSKLL 1744
Query: 350 -DPPTLVDLILEVVAANLCSSLE 371
D TL +LE V L + +
Sbjct: 1745 EDDQTLTRSLLECVGVGLVADFQ 1767
Score = 73.9 bits (180), Expect = 3e-10, Method: Composition-based stats.
Identities = 35/101 (34%), Positives = 57/101 (56%), Gaps = 4/101 (3%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+ EK +L + F ++ + G G++P ++Y+CTIEK + L+ +++E
Sbjct: 1306 LAEEKTMALQPLTTAYDFNVDGHYGSSGRFP----LCGAPAVYVCTIEKANSLLNHMLEE 1361
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQ 101
R DEIG +V+DE HM+ E RG LE +SKVL + + Q
Sbjct: 1362 GRADEIGAVVVDELHMVGESGRGATLELFLSKVLVINAARQ 1402
Score = 72.0 bits (175), Expect = 1e-09, Method: Composition-based stats.
Identities = 73/272 (26%), Positives = 129/272 (47%), Gaps = 21/272 (7%)
Query: 420 GHLSLTSIAKAAVQAGLSHDVCLIIYSDLLH-NKLNFCLLNSLHMLFLVIPLEYRIPSDG 478
+ +TS ++V++ S + L++ ++L L + LH+ + + PL D
Sbjct: 1954 AQVHVTSFGSSSVRSCFSVEEALLLRAELDELRHTGLILSDDLHLCYFLTPLREVGKCDW 2013
Query: 479 ILLSRSKVYDRYTKFHPQTLRVAEALGVTENLV---ALNVTGKLK---DEKKALLC--RF 530
LL ++ R+A LGV V A+ + G L+ + ++ L RF
Sbjct: 2014 ELLRL-----MMSRMSDSRQRIASLLGVDAYFVDQQAMGLGGPLQATEEGRRRLFTARRF 2068
Query: 531 FHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELWCYKQLL 590
+ A +L DVL V + Y + LQN + S F+S + FC + E + + +L
Sbjct: 2069 YVALMLADVLAEVPMATVEQRYNVSRGQLQNLMRSASMFSSSITSFCHAM-EWFSLEAVL 2127
Query: 591 TDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIARADAKEMVAKIRHLPL 650
+ + L + P+L LM++ G++ RAR L NAG+ + IA ADA +MV+K++ +
Sbjct: 2128 SSFVKRLGFGVKPDLLPLMEIRGMQPPRARALWNAGFKKVAAIAAADADDMVSKVKLMNP 2187
Query: 651 RSARNLISAAKLHFITKMDKVEAMKNLIQNLQ 682
+ ++ AAK F TK + A++ LQ
Sbjct: 2188 KDSK----AAK--FFTKRSALMAIREANLALQ 2213
>gi|441156004|ref|ZP_20966894.1| helicase [Streptomyces rimosus subsp. rimosus ATCC 10970]
gi|440617807|gb|ELQ80896.1| helicase [Streptomyces rimosus subsp. rimosus ATCC 10970]
Length = 1049
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 123/438 (28%), Positives = 201/438 (45%), Gaps = 40/438 (9%)
Query: 52 KLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSI---QIFAMSAT 108
K IG L + + +G++VIDE L P+RGP+LE +++ + S QI +SA
Sbjct: 401 KFIGLLPKRPDLLSVGVLVIDEIQSLMLPERGPLLETLLTCLRVRDGSTDTPQIVGLSAV 460
Query: 109 IGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSFD--GKSLTEIYADNLDYSLTG 166
+G + L+ ++ R E V ++ D G TE + D T
Sbjct: 461 LGKPDELARWLRANLVTAARREAPLLEGVMGPDGCYRYRDQQGNESTEQLLEPADTVETA 520
Query: 167 SGPDAVLHLVQ----GNLMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEAL 222
+ V LV V++F +++ LA L + + +E+L
Sbjct: 521 TDDRLVTRLVSRLVVDGQQVIVFRATRGQARTLARSL-------ARNLGLPPADTALESL 573
Query: 223 KEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGT--LQIICCTSTLAAGVN 280
+ G+ + L C+ GVA+H ADLT ERRL+E A+ + ++++ T+TLA GVN
Sbjct: 574 SSGDGGRTTDLLRMCLEKGVAFHIADLTTEERRLLELAFASADSEVRVLVATTTLAQGVN 633
Query: 281 LPAQRVII----RDSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDF-LRFS 335
LPA V++ S GR + S++ YK M GRAGR GL E G +I+L + D ++
Sbjct: 634 LPADSVVVCELEHPSSDGRPY-SVSEYKNMAGRAGRVGLVEQGRAIILARGTADADQKWR 692
Query: 336 SMMNAGPEPISSHMDPPT-------LVDLILEVVAANLCSSLEDVKTLIKHTL-FYQLKS 387
+ PE + S + P+ L L V A CS DV+ + T +Q ++
Sbjct: 693 RYVQGDPEDVRSALLEPSVDVRAVILAALSEPAVLAGRCSG-PDVERFMAATFAAHQCRA 751
Query: 388 PEDQQTFLETTLSEIVASLLAS---KGTMLTMNE-AGHLSLTSIAKAAVQAGLSHDVCLI 443
F T + +V+ L+A+ KGT E L+LT + + AV++GL D
Sbjct: 752 NGSGAPFPSTVIRPMVSELVATGFLKGTPSGTEELPKGLALTDLGRLAVRSGLGVDSVTA 811
Query: 444 I---YSDLLHNKLNFCLL 458
+ +D+ +++N L
Sbjct: 812 VAEALADVPADRINRATL 829
>gi|408403348|ref|YP_006861331.1| ski2-like helicase [Candidatus Nitrososphaera gargensis Ga9.2]
gi|408363944|gb|AFU57674.1| ski2-like helicase [Candidatus Nitrososphaera gargensis Ga9.2]
Length = 724
Score = 129 bits (325), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 108/369 (29%), Positives = 181/369 (49%), Gaps = 32/369 (8%)
Query: 30 YPPTKRQLNKKSIYICTIEKGSKLIGSLIQEN--RIDEIGLIVIDEFHMLNEPQRGPILE 87
Y + ++L + + T EK + L + N + ++GL V DE H++ + +RGP LE
Sbjct: 113 YDSSGKELAGADVIVLTNEK----MDMLFRHNAEWLGDVGLFVSDEVHLIGDRERGPTLE 168
Query: 88 CVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVENS-RPTKHSEYVTVDKRVFQS 146
+++K+ Q+ A+SAT+ N + ++ ++ G VE+ RPTK E V + +
Sbjct: 169 MMLTKIRKHYPQSQVVALSATVANSDEIADWL-GCELVESDWRPTKLVEGV-YEYGAVRM 226
Query: 147 FDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRLQFDRFPG 206
DG + S S D L ++G LIF ++ +LA + G
Sbjct: 227 GDGSRF------KVTSSGVSSAVDLALDSLEGGGQALIFAETRKRAVSLAAKA----VEG 276
Query: 207 T-KEYKKQEKEDLIEA----LKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAY 261
T + K E+E A + + +D + + L + + GVA+HHA L R ++E+++
Sbjct: 277 TYRRLDKAERELAASASSDIIAKGDDSETTKTLAQLVAKGVAFHHAGLGPSSRCIVEDSF 336
Query: 262 LAGTLQIICCTSTLAAGVNLPAQRVIIR-----DS-YVGRDFISLNMYKQMVGRAGRTGL 315
G ++I+ T TLAAGVNLPA+RV+I DS Y G IS+ YKQ+ GRAGR
Sbjct: 337 KKGIIKILTATPTLAAGVNLPARRVVIASILRYDSDYGGSVPISVLEYKQLCGRAGRPKY 396
Query: 316 QESGESIMLCKTMQDFLR-FSSMMNAGPEPISSHMDPPTLVDL-ILEVVAANLCSSLEDV 373
SGE+I++ ++ + + + PEP+ S + + V +L +A ++
Sbjct: 397 DTSGEAIIVSESGVNAEELYDHYVLGSPEPLRSQLSSDSAVRFHLLSTIATVPGMKKPEI 456
Query: 374 KTLIKHTLF 382
L TLF
Sbjct: 457 HELFASTLF 465
>gi|268324987|emb|CBH38575.1| putative ski2-type helicase [uncultured archaeon]
Length = 672
Score = 129 bits (324), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 152/649 (23%), Positives = 280/649 (43%), Gaps = 93/649 (14%)
Query: 10 AKAAEEFKFYLEEYAGVK------GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRI 63
A A E+++ + ++Y+ V G Y + R L + +I + T+EK L + ++ +
Sbjct: 77 ALAYEKYQNFKDKYSSVATVGISTGDYESSSRYLERYNIILLTLEKLDSL--TRLKPAWL 134
Query: 64 DEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGIT 123
+I ++V+DE H+L E +RGP LE +++ + S +I A+SAT+ N+ ++
Sbjct: 135 SKISVVVVDEAHVLGEEKRGPRLEGALARFMSFNPSARIVALSATMSNVEEFGNWLHASV 194
Query: 124 YVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVL 183
RP V + + VF + D + + V+ V+ + VL
Sbjct: 195 IKSEWRP------VPLKEEVFLAEDDRGII----------------TRVIEEVKEDAQVL 232
Query: 184 IFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVA 243
+F ++K ++ A ++ + + +E + L E + D +L E + +GVA
Sbjct: 233 VFVNTKRGSASFARKI-----AAQLKLRNEELDKLAELVDVGVD-----DLAEMVRFGVA 282
Query: 244 YHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS---YVGRDF--I 298
YH++ L +RR IE+++ L++ICCT TLA GV+LPA+ VIIR+ +GR +
Sbjct: 283 YHNSWLHPEQRRAIEDSFRNRILKVICCTPTLAMGVSLPAKMVIIRNYKFFTLGRGVEPM 342
Query: 299 SLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSM-MNAGPEPISSHMDPPTLVDL 357
+ KQ+ GRAGR G +++ K + + +N E I S T+ +
Sbjct: 343 PVCWVKQVFGRAGRPEHDTYGLGLIVAKNEDELEAIERVYINGELERIESRFSNDTMTEQ 402
Query: 358 ILEVVAANLCSSLEDVKTLIKHTLFYQLKSPEDQQTFLETTLSEIV-----ASLLASKGT 412
+L +A ++ V + T + E F++ L I+ A + G
Sbjct: 403 VLATIAGG-AHRIDQVYEFLDCTFYAHQNGGE--IGFVKAELDSILEGLTRAGFIEMDGD 459
Query: 413 MLTMNEAGHLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEY 472
+ + G +L+S ++ + L + SD + + LL L VIPL+
Sbjct: 460 SIRATKFG--TLSSRLYLSLNSALELREGITALSDSRASDFDLLLL--LAKCEEVIPLKV 515
Query: 473 RIPSDGILLSRSKVYDRYTKFHPQTLRVAEALGVTENLVALNVTGKLKDEKKALLCRFFH 532
+ + ++ ++ H A ALG A++ H
Sbjct: 516 K--------NAMEIAGSFSDNHEWQYNGAHALG------------------SAIIA---H 546
Query: 533 ACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELWCYKQLLTD 592
A I D L + K+ +++G + N + V + R E L + Y + L
Sbjct: 547 AWI--DELTY---PKLKELFGTYPGEIHNNIYVLGWIGYAASRMAEYLQDDEMYAR-LNG 600
Query: 593 LPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIARADAKEM 641
L + + L L+ + GV AR+L +AG+ + E +A AD + +
Sbjct: 601 LQDRIRHGVKTELLRLVSIKGVGRIIARRLYSAGFRNEEEVANADLERL 649
>gi|315426483|dbj|BAJ48115.1| helicase [Candidatus Caldiarchaeum subterraneum]
gi|315426513|dbj|BAJ48144.1| helicase [Candidatus Caldiarchaeum subterraneum]
gi|343485265|dbj|BAJ50919.1| helicase [Candidatus Caldiarchaeum subterraneum]
Length = 711
Score = 129 bits (323), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 160/652 (24%), Positives = 276/652 (42%), Gaps = 61/652 (9%)
Query: 10 AKAAEEFKFYL-EEYAGVK--GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEI 66
A+ +EF +L +E+ V G Y L + I T EK L+ + ID +
Sbjct: 83 AEKLQEFTDFLGDEFKAVASTGDYDSADPWLANYDVIITTNEKADSLLRH--GASWIDSV 140
Query: 67 GLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVE 126
L+V DE HML + RGP LE ++++ Q+ A+SAT N + ++ ++
Sbjct: 141 SLLVADEVHMLGDTDRGPTLEMTLTRLRNRNPRAQLLALSATAPNADEIAAWLGAELISL 200
Query: 127 NSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFC 186
+ RP E V D + S + LDY+ S +L +VQ V++F
Sbjct: 201 DWRPVPLREGVYYDGEIRYSDRARRKVR----ELDYNPVIS---LLLEVVQDGGQVIVFA 253
Query: 187 SSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEE-----NDGKLSTNLEECILYG 241
+++ A + + ++ D + L +E + + + G
Sbjct: 254 NTRKRAEQYAEKAAAAL--SRETLVTDDERDKLNGLADELLLSAEASSFTDRVAALMRQG 311
Query: 242 VAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVII---RDSYVGRDF- 297
+HHA L A RR +E+A+ L+++ T TLAAGVNLPA+ VII R VG
Sbjct: 312 ACFHHAGLGAVHRRFVEKAFRNRILKVLAATPTLAAGVNLPARVVIIPELRRYEVGEGLR 371
Query: 298 -ISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDF-LRFSSMMNAGPEPISSHMDPPTLV 355
IS+ YKQ GRAGR G GE++ + ++ ++ L + PE + S + +
Sbjct: 372 NISVTEYKQFCGRAGRPGFDTEGEALTIARSEEELELIMEKYIKGKPERVWSRLGSENHL 431
Query: 356 DL-ILEVVAANLCSSLEDVKTLIKHT-LFYQLKSPEDQQTFLETTLSEIVASLLASKGTM 413
+ L V+A+ S + + + T L +Q S L +L+ +V LA G
Sbjct: 432 RIQTLAVIASEPVKSFDGLVKFFESTFLCHQFGS-----ALLRKSLTGVV-DFLARHG-- 483
Query: 414 LTMNEAGHLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEYR 473
+ A L T + K + + L I + N L + L V+ +
Sbjct: 484 -FVEAADGLEATRLGKRVAELYIDPLTALAI----IQTCGNRPRLMTELSLLQVVCNTHE 538
Query: 474 IPSDGILLSRSKVYDRYTKFH-PQTLRVAEALGVTENLVALNVTGKLKDEKKALLCRFFH 532
+PS + S S +R+ + + Q +V + + + D+ + L
Sbjct: 539 VPSVPMRRSDSARLERFVEENREQFFQVPDPV-------------ESPDDYEFFLDSVKT 585
Query: 533 ACILYDVLNFDNHQKVAKMYGIQNSH---LQNFLNVTSYFASKVYRFCEELPELWCYKQL 589
A ++ + ++ + +G++ L+ ++ SY AS++ R + L
Sbjct: 586 AVLMNAWIEEVGEGELYERWGVEPGDLAVLRERVSWISYAASQLMRVVGHTDLV----HL 641
Query: 590 LTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIARADAKEM 641
L + + + P L L+ L GV RAR L NAGY ++E + RA A+E+
Sbjct: 642 FELLSERVEHGVRPELLPLVSLKGVGRVRARNLYNAGYRTIEDLRRASAEEL 693
>gi|219853340|ref|YP_002467772.1| ski2-like helicase [Methanosphaerula palustris E1-9c]
gi|219547599|gb|ACL18049.1| DEAD/DEAH box helicase domain protein [Methanosphaerula palustris
E1-9c]
Length = 727
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 103/358 (28%), Positives = 166/358 (46%), Gaps = 30/358 (8%)
Query: 37 LNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYL 96
L I I T EK L+ + + + ++ L+V+DE H++ P RGP LE V++K+ Y
Sbjct: 108 LGANDIIIATSEKVDSLLRN--KTPWLRQVTLLVVDEVHLIASPDRGPTLEMVITKLRYR 165
Query: 97 KKSIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIY 156
++Q+ A+SATIGN L+ ++ RP + V ++ + + E
Sbjct: 166 IPNLQVIALSATIGNPKKLADWLGAGLVTSEWRPVDLRQGVFYRGKIHFHQGEREVAEP- 224
Query: 157 ADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRLQFD-----RFPGTKEYK 211
+ D +L + ++ L+F +S+ A R + P +EY
Sbjct: 225 SKTEDLNL-------CIDTIEEGGQCLVFVNSRRNAEGFAKRAAAAFKKRVKSPVLEEYA 277
Query: 212 KQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICC 271
+ ++E+ + + L+ CI G A+HHA L R LIEE +L G ++ I
Sbjct: 278 AR----ILESATTDQEKVLAA----CIATGSAFHHAGLRREFRELIEEGFLKGEIRCISS 329
Query: 272 TSTLAAGVNLPAQRVIIRD-----SYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCK 326
T TLAAG+NLPA+RVIIRD G I + Y QM GRAGR L GE++M+ K
Sbjct: 330 TPTLAAGLNLPARRVIIRDLLRFSGAEGMAPIPVGEYHQMAGRAGRPHLDPYGEAVMIAK 389
Query: 327 TMQDFLR-FSSMMNAGPEPISSH-MDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLF 382
Q F ++A EP+ S L +L ++A + + + + T +
Sbjct: 390 NEQSIEELFERYIDAPAEPVVSQCTRSGALCSHLLSLIATGFATDRKGLSKFLVQTFY 447
>gi|159113600|ref|XP_001707026.1| DNA helicase [Giardia lamblia ATCC 50803]
gi|157435128|gb|EDO79352.1| DNA helicase [Giardia lamblia ATCC 50803]
Length = 899
Score = 128 bits (322), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 94/316 (29%), Positives = 155/316 (49%), Gaps = 22/316 (6%)
Query: 25 GVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNE-PQRG 83
G+ G + ++ IY+CT EK + +Q+ + +GL+V DE H++ + R
Sbjct: 198 GITGMKQVPRVSGSRPIIYVCTFEKAILVFSKFLQKGLVAHLGLLVFDEIHLIGDGSTRA 257
Query: 84 PILECVVSKVLYLKKSI------QIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYV 137
LE +S+++ L+K+ +I MSAT+ NI+ L ++ Y N RP EYV
Sbjct: 258 CKLELFISQLILLEKTARIPICYRIVGMSATLSNISDLQRWLGCYVYECNFRPISLQEYV 317
Query: 138 TVDKRVF------QSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSK-- 189
VD+ ++ + + + + + L S P + L+ ++ IF ++K
Sbjct: 318 LVDRNLYLFNAQTKKLEPRGQILVNSPITKVKLNIS-PLNTISLIALKPLI-IFVTTKHE 375
Query: 190 -IACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHAD 248
+ +N + FP ++ LI LK+ D + I GV YH++
Sbjct: 376 TVDVANSLAEIIRTSFPSPPAELIAKRTQLITELKQLGD----VSWAPLISAGVMYHNSS 431
Query: 249 LTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGRDFISLNMYKQMVG 308
L + ER LIEEA+ + + T+T++AGVNLPA+ VIIR +G + Y+QM+G
Sbjct: 432 LASLERTLIEEAFSNSVIHTLVATTTISAGVNLPARSVIIRYQKIGSIELDGAKYRQMIG 491
Query: 309 RAGRTGLQESGESIML 324
RAGR GL SG S +L
Sbjct: 492 RAGRMGLATSGHSFLL 507
>gi|124486563|ref|YP_001031179.1| ski2-like helicase [Methanocorpusculum labreanum Z]
gi|124364104|gb|ABN07912.1| DEAD/DEAH box helicase domain protein [Methanocorpusculum labreanum
Z]
Length = 726
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 145/621 (23%), Positives = 255/621 (41%), Gaps = 57/621 (9%)
Query: 32 PTKRQ--LNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECV 89
P +R L + I + T EK LI + + + I L+V+DE H++ + RG LE V
Sbjct: 101 PDQRDEYLGRYDIIVATSEKTDSLIRN--KAGWLKSISLLVVDEIHLIGDESRGGTLEMV 158
Query: 90 VSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSFDG 149
++++ + +QI +SAT+GN +L+ +++ RP E V D + F G
Sbjct: 159 IAQLRFQNPDMQIIGLSATMGNPESLAKWLDAALITSEWRPVDLREGVYYDGAIH--FHG 216
Query: 150 KSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRLQFDRFPGTKE 209
L+ + +L V L+F SS+ + A R T +
Sbjct: 217 TERL------LETPKKDDDLNLLLDTVNEGGQCLVFVSSRRSAEAYAKRAAV-----TLK 265
Query: 210 YKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQII 269
++L + + + + NL + G A+HHA L R +EE + G + I
Sbjct: 266 KTSPTLDELSKRIGKADTTASGKNLALAVKSGAAFHHAGLPREARAAVEEGFRNGDILCI 325
Query: 270 CCTSTLAAGVNLPAQRVIIRD-----SYVGRDFISLNMYKQMVGRAGRTGLQESGESIML 324
T TLAAG+NLPA+RVIIRD G + I + Y+QM GRAGR L GE++++
Sbjct: 326 SSTPTLAAGLNLPARRVIIRDYQRYERGAGMNPIPVLEYRQMAGRAGRPRLDPYGEAVLI 385
Query: 325 CKTMQDFLR-FSSMMNAGPEPISSHMDPPT-LVDLILEVVAANLCSSLEDVKTLIKHTLF 382
K +D R F ++A E I+S L +L ++ + + +V+ ++ + +
Sbjct: 386 AKQQRDVDRLFEEFIDAPAEDITSQCQRENELRSHLLALITSGFAQTDGEVRGFMEKSFY 445
Query: 383 YQLKSPEDQQTFLETTLSEIVASLLASKGTMLTMNEAGHLSLTSIAKAAVQAGLSHDVCL 442
KS + L+ + + +A L S + E + T + L + +
Sbjct: 446 ASQKSVHRR---LDKNIEKTLAYLEKSG---MVEREGDEIHGTLFGALTSRLYLDPESAM 499
Query: 443 IIYSDLLHNKLNFCLLNSLHMLFLVIPLEYRIPSDGILLSRSKVYDRYTKFHPQTLRVAE 502
+I L K F LH+L + P +R + S K D+ K + L
Sbjct: 500 MIKDGLAGKK--FTAFGMLHLLCMT-PDMFRFY---LKASDEKFVDKILKERSEELL--- 550
Query: 503 ALGVTENLVALNVTGKLKDEKKALLCRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNF 562
L D + A + + ++ + + +G+ +
Sbjct: 551 ----------------LDDLSEEFFAAIKTALVAEEWISEIGEDSICERFGVGAGDIHAV 594
Query: 563 LNVTSYFASKVYRFCEELPELWCYKQLLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQL 622
+ + R C E C + + DL + + L L+ L G+ RAR++
Sbjct: 595 VENLRWLMHAAGRICHEFAAD-CDDE-MRDLELRVTHGVKEELLPLIALKGIGRVRARRI 652
Query: 623 LNAGYSSLELIARADAKEMVA 643
+ G +S E + A+ E+V+
Sbjct: 653 FDRGITSPEKLMAAEKDEVVS 673
>gi|119626341|gb|EAX05936.1| DNA helicase HEL308, isoform CRA_c [Homo sapiens]
Length = 541
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 59/116 (50%), Positives = 79/116 (68%), Gaps = 1/116 (0%)
Query: 15 EFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEF 74
E F++EEYAG KG++PPTKR+ KKS+YI TIEKG L+ SLI+ RID +GL+V+DE
Sbjct: 408 ELGFFVEEYAGSKGRFPPTKRR-EKKSLYIATIEKGHSLVNSLIETGRIDSLGLVVVDEL 466
Query: 75 HMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVENSRP 130
HM+ E RG LE ++K+LY K+ QI MSAT+ N+ L F++ Y RP
Sbjct: 467 HMIGEGSRGATLEMTLAKILYTSKTTQIIGMSATLNNVEDLQKFLQAEYYTSQFRP 522
>gi|145484190|ref|XP_001428105.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124395189|emb|CAK60707.1| unnamed protein product [Paramecium tetraurelia]
Length = 2066
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 133/454 (29%), Positives = 225/454 (49%), Gaps = 59/454 (12%)
Query: 16 FKFYLEEY----AGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVI 71
F+ LE Y A V G TK QLN + I T EK L + Q + I + L++I
Sbjct: 511 FQNRLEPYNIKVAEVTGDTHLTKHQLNTIQVLIATPEKWDILTRKIQQNDFISLVRLVII 570
Query: 72 DEFHMLNEPQRGPILECVVSKVLYL----KKSIQIFAMSATIGNINALSTFIE----GIT 123
DE H+L++ RGP++E ++++ L L ++ ++I +SAT+ N + ++TFI G+
Sbjct: 571 DEIHLLHDS-RGPVIESIIARQLKLMEERQEVVRIVGLSATLPNYSDVATFIRVKQSGVF 629
Query: 124 YVENS-RPTK-HSEYVTVDKRVFQSFDGKSLT-EIYADNLDYSLTGSGPDAVLHLVQGNL 180
+ +NS RP +Y+ ++++ + LT EI + + +T S
Sbjct: 630 FFDNSYRPVPLQQQYIGINEK--KPIRRMLLTNEILYEKVIERITKS------------- 674
Query: 181 MVLIFCSSKIACSNLALRLQFDRFPGTK--EYKKQEK--EDLIEALKEENDGKLSTNLEE 236
+L+F S+ A L+ F + ++ ++E + ++E + + D K S +L+E
Sbjct: 675 QILVFVHSRKETVKTAKTLKEMAFSKDELSKFIREESSSKKILETVIAQEDIK-SADLKE 733
Query: 237 CILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYV--- 293
+ G+A HHA L G+R L+E + +QI+ TSTLA GVNLPA VII+ + +
Sbjct: 734 LLASGIAIHHAGLCRGDRDLVESLFEKKNIQILISTSTLAWGVNLPAHTVIIKGTQIYSP 793
Query: 294 --GRDFISLNMYK--QMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHM 349
G+ +I L+ QM+GRAGR SGE I+L T Q+ + S++N PI S
Sbjct: 794 DQGK-WIELSPQDILQMMGRAGRPRYDTSGEGIILT-TYQELKYYLSLLNVQL-PIESQF 850
Query: 350 DPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFY--QLKSPE--------DQQTFLETTL 399
L EV N+ +L+D + +T Y L++P+ + Q ++
Sbjct: 851 VSQLADQLNAEVAQGNI-KNLKDGVNWLGYTYLYVRMLRNPQLYNIPDYSNDQALIKYRA 909
Query: 400 SEI-VASLLASKGTMLTMN-EAGHLSLTSIAKAA 431
I A LL K +++T + + G++ T + K A
Sbjct: 910 DLIHSACLLLDKNSLVTYDKKTGNIESTILGKIA 943
>gi|288869689|ref|ZP_05975717.2| putative Ski2-type helicase [Methanobrevibacter smithii DSM 2374]
gi|288861084|gb|EFC93382.1| putative Ski2-type helicase [Methanobrevibacter smithii DSM 2374]
Length = 693
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 102/365 (27%), Positives = 179/365 (49%), Gaps = 38/365 (10%)
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIE 120
N + E+ ++IDEFHM+ E RGP LE +++ + S++I A+SAT+ NI+ + +++
Sbjct: 125 NVLREVDTLIIDEFHMIGEYSRGPTLESAITRAKIINPSLRIIALSATLKNIDEIEQWLD 184
Query: 121 GITYVENSRPTKHSEYVTVDKRVFQS--FDGKSLTEIYADNLDYSLTGSGPDAVLHLVQG 178
G T N RP V ++K V + F+ K+ ++ V ++
Sbjct: 185 GKTVEHNYRP------VPLNKEVLDAEMFNTKNKNDVIV------------KIVEKAIED 226
Query: 179 NLMVLIFCSSKIACSNLAL----RLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTN- 233
N L F S++ +LA ++ K+ KQ + L+E K++ G L T
Sbjct: 227 NSQALSFVSTRRFTESLATYVAKKIDKKTTKEQKQKFKQVADKLLEVPKKK--GSLPTTT 284
Query: 234 ---LEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRD 290
L E GV +HHA L ++ +IE+ + G + +I T +L GVNLP++ V+IRD
Sbjct: 285 CLKLAEAAEKGVVFHHAGLFNEQKEIIEDEFRKGNILMITATPSLMYGVNLPSKYVVIRD 344
Query: 291 ----SYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSS-MMNAGPEPI 345
+ G I + Y+QM GRAGR + G S ++ KTM + + +N E
Sbjct: 345 HTRWTSNGPASIPVFDYEQMSGRAGRPQYDDVGYSYLVAKTMDEAFDLEAHYVNGEIELT 404
Query: 346 SSHM--DPPTLVDLILEVVAANLCSSLEDVKTLIKHTLF-YQLKSPEDQQTFLETTLSEI 402
+S + + + I+ +A++L +L+D+ TL+ +Q+K+ F + +L+
Sbjct: 405 NSKLIDNKDAIYKQIIAQIASSLSKNLDDLNDFFGKTLYGFQMKNNPSMSMFAQDSLNWE 464
Query: 403 VASLL 407
+ S L
Sbjct: 465 LESAL 469
>gi|389631707|ref|XP_003713506.1| hypothetical protein MGG_15536 [Magnaporthe oryzae 70-15]
gi|351645839|gb|EHA53699.1| hypothetical protein MGG_15536 [Magnaporthe oryzae 70-15]
gi|440465529|gb|ELQ34848.1| pre-mRNA-splicing factor brr2 [Magnaporthe oryzae Y34]
gi|440481019|gb|ELQ61646.1| pre-mRNA-splicing factor brr2 [Magnaporthe oryzae P131]
Length = 2216
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 124/473 (26%), Positives = 227/473 (47%), Gaps = 58/473 (12%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V E+ + K E + + E G + TK+Q+ + I + T EK +
Sbjct: 592 LVQEQVGNFGKRLEPYGIKVSELTGDRQL---TKQQIAETQIIVTTPEKWDVITRKATDL 648
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVL----YLKKSIQIFAMSATIGNINALS 116
+ + + LI+IDE H+L++ RGP+LE +VS+ + + ++I +SAT+ N ++
Sbjct: 649 SYTNLVRLIIIDEIHLLHD-DRGPVLESIVSRTIRKTEQTGEPVRIVGLSATLPNFKDVA 707
Query: 117 TFI-----EGITYVENS-RPTK-HSEYVTVDKRVFQSFDGKSLTEIYA-DNLDYSLTGSG 168
+F+ +G+ + + S RP E++ V ++ K + +I +++ YS
Sbjct: 708 SFLRIDQNKGLFHFDGSFRPCPLRQEFIGVTEK-------KPIKQIKTMNDITYS----- 755
Query: 169 PDAVLHLVQGNLMVLIFCSSKIACSNLA--LR---LQFDRFPGTKEYKKQEKEDLIEALK 223
+ H+ + +LIF S+ + A +R L + ++ +E L EA
Sbjct: 756 -KVIEHVGKNRNQMLIFVHSRKETAKTAKYIRDKALDMETINDILKHDAGSREILQEAAN 814
Query: 224 EENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPA 283
+ ND +L++ + YG HHA ++ +R +E+ + G +Q++ CT+TLA GVNLPA
Sbjct: 815 QANDA----DLKDLLPYGFGIHHAGMSRADRTDVEDLFADGAIQVLVCTATLAWGVNLPA 870
Query: 284 QRVIIRDSYV----GRDFISLNMYK--QMVGRAGRTGLQESGESIMLCKTMQDFLRFSSM 337
VII+ + V ++ L+ QM+GRAGR GE I++ T + + S+
Sbjct: 871 HTVIIKGTQVYSPEKGSWVELSPQDVLQMLGRAGRPQFDTYGEGIIIT-TQNEMTYYLSL 929
Query: 338 MNAGPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQ-LKSP-------- 388
+N PI S + + +L E+V N+ S E V+ L LF + L+SP
Sbjct: 930 LNQQ-LPIESQLMSKLVDNLNAEIVLGNVRSRDEGVEWLGYTYLFVRMLRSPGLYQVGAD 988
Query: 389 -EDQQTFLETTLSEI-VASLLASKGTMLTMNE-AGHLSLTSIAKAAVQAGLSH 438
ED + + + I A+ + KG+++ +E G L T + + A ++H
Sbjct: 989 YEDDEALEQKRVDLIHSAATVLRKGSLIKYDEKTGKLQATELGRIASHYYITH 1041
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 81/370 (21%), Positives = 156/370 (42%), Gaps = 37/370 (10%)
Query: 35 RQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVL 94
R L K + + T + L + I + L + DE HML Q G + E +VS++
Sbjct: 1466 RLLEKGDLILATPAQWDLLSRQWKRRKNIQTVELFIADELHMLGAGQVGFVYEIIVSRMQ 1525
Query: 95 YLK----KSIQIFAMSATIGNINALSTFIEGITY-VENSRPTKHSEYVTVDKRVFQSFD- 148
Y++ + ++I +S + N + +I+ + + N P H V ++ + QSF
Sbjct: 1526 YIRSVTEQPMRIVGLSVPLANARDIGEWIDCKKHDIYNFSP--HVRPVPLELHI-QSFTI 1582
Query: 149 --GKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRLQFDRFPG 206
SL A ++ PD + N + + + LA + DRF
Sbjct: 1583 PHFPSLMLAMAKPTYLAINQMSPDKPALVFVPNRKQTRATARDLLTACLADEDE-DRF-- 1639
Query: 207 TKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTL 266
+ + L+E ++E+ L E + +G+ Y+H L+ +RR+++ Y G +
Sbjct: 1640 -LHVDVDQIKPLLEKIQEDA-------LRESLSHGIGYYHEALSTTDRRIVKHLYDKGAI 1691
Query: 267 QIICCTSTLAAGVNLPAQRVIIRDS--YVGRD--FISLNMYK--QMVGRAGRTGLQESGE 320
Q++ + + ++ A VI+ + Y GR+ +I + QM G+A R G + G
Sbjct: 1692 QVLIASRDVCWELDSTAHLVIVMGTQYYEGREHRYIDYPVSDILQMFGKALRPGKEGRGR 1751
Query: 321 SI-MLCKTMQDFLRFSSMMNAGPEPISSHMDPPT-----LVDLILEVVAANLCSSLEDVK 374
+ ML +D+ + +N P+ S + + L D + ++ + S +D
Sbjct: 1752 GVLMLPAVKRDY--YKKFLNEA-LPVESQLTEQSQNHAYLHDAFVTEISIKMVESGDDAL 1808
Query: 375 TLIKHTLFYQ 384
T FY+
Sbjct: 1809 NWTTFTYFYR 1818
>gi|222445132|ref|ZP_03607647.1| hypothetical protein METSMIALI_00751 [Methanobrevibacter smithii
DSM 2375]
gi|222434697|gb|EEE41862.1| DEAD/DEAH box helicase [Methanobrevibacter smithii DSM 2375]
Length = 693
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 102/365 (27%), Positives = 179/365 (49%), Gaps = 38/365 (10%)
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIE 120
N + E+ ++IDEFHM+ E RGP LE +++ + S++I A+SAT+ NI+ + +++
Sbjct: 125 NVLREVDTLIIDEFHMIGEYSRGPTLESAITRAKIINPSLRIIALSATLKNIDEIEQWLD 184
Query: 121 GITYVENSRPTKHSEYVTVDKRVFQS--FDGKSLTEIYADNLDYSLTGSGPDAVLHLVQG 178
G T N RP V ++K V + F+ K+ ++ V ++
Sbjct: 185 GKTVEHNYRP------VPLNKEVLDAEMFNTKNKNDVIV------------KIVEKAIED 226
Query: 179 NLMVLIFCSSKIACSNLAL----RLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTN- 233
N L F S++ +LA ++ K+ KQ + L+E K++ G L T
Sbjct: 227 NSQALSFVSTRRFTESLATYVAKKIDKKTTKEQKQKFKQVADKLLEVPKKK--GSLPTTT 284
Query: 234 ---LEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRD 290
L E GV +HHA L ++ +IE+ + G + +I T +L GVNLP++ V+IRD
Sbjct: 285 CLKLAEAAEKGVVFHHAGLFNEQKEIIEDEFRKGNILMITATPSLMYGVNLPSKYVVIRD 344
Query: 291 ----SYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSS-MMNAGPEPI 345
+ G I + Y+QM GRAGR + G S ++ KTM + + +N E
Sbjct: 345 HTRWTSNGPASIPVFDYEQMSGRAGRPQYDDVGYSYLVAKTMDEAFDLEARYVNGEIELT 404
Query: 346 SSHM--DPPTLVDLILEVVAANLCSSLEDVKTLIKHTLF-YQLKSPEDQQTFLETTLSEI 402
+S + + + I+ +A++L +L+D+ TL+ +Q+K+ F + +L+
Sbjct: 405 NSKLIDNKDAIYKQIIAQIASSLSKNLDDLNDFFGKTLYGFQMKNNPSMSMFAQDSLNWE 464
Query: 403 VASLL 407
+ S L
Sbjct: 465 LESAL 469
>gi|148642899|ref|YP_001273412.1| ATP-dependent helicase [Methanobrevibacter smithii ATCC 35061]
gi|148551916|gb|ABQ87044.1| ATP-dependent helicase [Methanobrevibacter smithii ATCC 35061]
Length = 693
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 102/365 (27%), Positives = 179/365 (49%), Gaps = 38/365 (10%)
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIE 120
N + E+ ++IDEFHM+ E RGP LE +++ + S++I A+SAT+ NI+ + +++
Sbjct: 125 NVLREVDTLIIDEFHMIGEYSRGPTLESAITRAKIINPSLRIIALSATLKNIDEIEQWLD 184
Query: 121 GITYVENSRPTKHSEYVTVDKRVFQS--FDGKSLTEIYADNLDYSLTGSGPDAVLHLVQG 178
G T N RP V ++K V + F+ K+ ++ V ++
Sbjct: 185 GKTVEHNYRP------VPLNKEVLDAEMFNTKNKNDVIV------------KIVEKAIED 226
Query: 179 NLMVLIFCSSKIACSNLAL----RLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTN- 233
N L F S++ +LA ++ K+ KQ + L+E K++ G L T
Sbjct: 227 NSQALSFVSTRRFTESLATYVAKKIDKKTTKEQKQKFKQVADKLLEVPKKK--GSLPTTT 284
Query: 234 ---LEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRD 290
L E GV +HHA L ++ +IE+ + G + +I T +L GVNLP++ V+IRD
Sbjct: 285 CLKLAEAAEKGVVFHHAGLFNEQKEIIEDEFRNGNILMITATPSLMYGVNLPSKYVVIRD 344
Query: 291 ----SYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSS-MMNAGPEPI 345
+ G I + Y+QM GRAGR + G S ++ KTM + + +N E
Sbjct: 345 HTRWTSNGPASIPVFDYEQMSGRAGRPQYDDVGYSYLVAKTMDEAFDLEARYVNGEIELT 404
Query: 346 SSHM--DPPTLVDLILEVVAANLCSSLEDVKTLIKHTLF-YQLKSPEDQQTFLETTLSEI 402
+S + + + I+ +A++L +L+D+ TL+ +Q+K+ F + +L+
Sbjct: 405 NSKLIDNKDAIYKQIIAQIASSLSKNLDDLNDFFGKTLYGFQMKNNPSMSMFAQDSLNWE 464
Query: 403 VASLL 407
+ S L
Sbjct: 465 LESAL 469
>gi|367042576|ref|XP_003651668.1| hypothetical protein THITE_2112210 [Thielavia terrestris NRRL 8126]
gi|346998930|gb|AEO65332.1| hypothetical protein THITE_2112210 [Thielavia terrestris NRRL 8126]
Length = 2207
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 128/490 (26%), Positives = 234/490 (47%), Gaps = 61/490 (12%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V E+ + K E + + E G + TK+Q++ + + T EK +
Sbjct: 598 LVQEQVGNFGKRLEPYGIKVSELTGDRQL---TKQQISDTQVIVTTPEKWDVITRKATDI 654
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVL----YLKKSIQIFAMSATIGNINALS 116
+ + + LI+IDE H+L++ RGP+LE +VS+ + + ++I +SAT+ N ++
Sbjct: 655 SYTNLVRLIIIDEIHLLHD-DRGPVLESIVSRTIRRTEQTGEPVRIIGLSATLPNYRDVA 713
Query: 117 TFI-----EGITYVENS-RPTK-HSEYVTV-DKRVFQSFDGKSLTEI-YADNLDYSLTGS 167
+F+ +G+ + + S RP E++ V DK+ + K++ +I Y L+
Sbjct: 714 SFLRVDFDKGMFHFDGSYRPCPLRQEFIGVSDKKAIKQL--KTMNDITYQKVLE------ 765
Query: 168 GPDAVLHLVQGNLMVLIFCSSKIACSNLA--LR---LQFDRFPGTKEYKKQEKEDLIEAL 222
H+ Q +L+F S+ + A +R L+ D ++ +E L EA
Sbjct: 766 ------HVGQHRNQMLVFVHSRKETAKTAKYIRDKALEMDTIGQILKHDAGTREVLSEAA 819
Query: 223 KEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLP 282
N+ T+L++ + YG HHA ++ +R +E+ + +G +Q++ CT+TLA GVNLP
Sbjct: 820 NSVNN----TDLKDILPYGFGIHHAGMSRADRTDVEDLFASGHIQVLVCTATLAWGVNLP 875
Query: 283 AQRVIIRDSYV----GRDFISLNMYK--QMVGRAGRTGLQESGESIMLCKTMQDFLRFSS 336
A VII+ + V ++ L+ QM+GRAGR GE I++ T + + S
Sbjct: 876 AHTVIIKGTQVYSPEKGSWVELSPQDVLQMLGRAGRPQFDTYGEGIIIT-TQGEIPYYLS 934
Query: 337 MMNAGPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQ-LKSP------- 388
++N PI S + + L E+V N+ S E V+ L LF + L+SP
Sbjct: 935 LLNQQ-LPIESQLASKLVDSLNAEIVLGNIRSRDEGVEWLGYTYLFVRMLRSPGLYSVGP 993
Query: 389 --EDQQTFLETTLSEI-VASLLASKGTMLTMNE-AGHLSLTSIAKAAVQAGLSHDVCLII 444
ED + + + I A+ + K ++ +E G + T + + A ++H + I
Sbjct: 994 EYEDDEALEQKRVDLIHSAATVLKKSNLIKYDEKTGRMQSTELGRIASHYYITHG-SMDI 1052
Query: 445 YSDLLHNKLN 454
Y+ L+ +N
Sbjct: 1053 YNKLIQPSMN 1062
Score = 45.4 bits (106), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 75/344 (21%), Positives = 146/344 (42%), Gaps = 48/344 (13%)
Query: 63 IDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKS----IQIFAMSATIGNINALSTF 118
+ + L + D+ HML G I E +VS++ Y++ ++I +S ++ N + +
Sbjct: 1500 VQTVELFIADDLHMLGG-LNGYIYEIIVSRMHYIRTQTELPLRIVGLSVSLANARDVGEW 1558
Query: 119 IEGITY-VENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQ 177
I+ + + N P H V ++ + +S T + +L ++ AV +
Sbjct: 1559 IDAKKHDIYNFSP--HVRPVPLELHI------QSYTIPHFPSLMLAMAKPTYLAVTQM-S 1609
Query: 178 GNLMVLIFCSSKIACSNLALRL--------QFDRFPGTKEYKKQEKEDLIEALKEENDGK 229
+ LIF S+ A L DRF + + L+E ++EE
Sbjct: 1610 ADQPALIFVPSRKQTRATARDLLSACLADDDEDRF---LHVEVDQIRKLLERVQEEA--- 1663
Query: 230 LSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIR 289
L E + +GV Y+H L+ ++R+++ Y G +Q++ + + ++ A VI+
Sbjct: 1664 ----LAEALSHGVGYYHEALSQSDKRIVKHLYNNGAIQVLIASRDVCWELDCTAHLVIVM 1719
Query: 290 DS--YVGRDF----ISLNMYKQMVGRAGRTGLQESGES---IMLCKTMQDFLRFSSMMNA 340
+ + GR+ L+ QM GRA + + G S +ML +++ + +N
Sbjct: 1720 GTQYFEGREHRYVDYPLSEVLQMFGRAVQPS--KDGRSRGVLMLPAVKREY--YKKFLNE 1775
Query: 341 GPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQ 384
P+ SH+ L D + ++ + S ED T FY+
Sbjct: 1776 A-LPVESHLH-NFLHDAFVTEISTKMIESGEDAINWATFTYFYR 1817
>gi|150398790|ref|YP_001322557.1| DEAD/DEAH box helicase domain-containing protein [Methanococcus
vannielii SB]
gi|226740607|sp|A6UN73.1|HELS_METVS RecName: Full=Putative ski2-type helicase
gi|150011493|gb|ABR53945.1| DEAD/DEAH box helicase domain protein [Methanococcus vannielii SB]
Length = 751
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 116/399 (29%), Positives = 189/399 (47%), Gaps = 46/399 (11%)
Query: 10 AKAAEEFKFYLEEYA--GVK-----GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQEN- 61
A A+E+F + ++Y G+K G Y TK L+K +I I T EK + SL++ N
Sbjct: 77 ALASEKFDEFQKKYETYGIKVGMSIGDYD-TKEDLSKYNIIITTSEK----LDSLMRHNI 131
Query: 62 -RIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIE 120
I ++ L VIDE H++ + +RG LE +++K+ + + QI +SAT+GN ++ ++
Sbjct: 132 EWIKDLSLAVIDEIHLIGDNERGGTLEVILTKLKNI--NAQIVGLSATVGNPEEIANWLN 189
Query: 121 GITYVENSRPTK-------HSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVL 173
+ RP + +E ++ + Q K++ I +NL D ++
Sbjct: 190 AKLVTDEWRPVELKKGIYLENEINYINNQDSQKKSFKAVKSISRNNL--------TDLIV 241
Query: 174 HLVQGNLMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKE-----ENDG 228
V LIFC+SK + + TK K E DL +E E
Sbjct: 242 DSVNEKGSCLIFCNSKRNAVGESKKHNL-----TKYLSKAELNDLNSISEEILSILETPT 296
Query: 229 KLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLP--AQRV 286
+ +L ECI GVA+HHA LT R+ +EE + +++ICCT TL+AG+NLP +
Sbjct: 297 ETCKSLSECIKKGVAFHHAGLTYQHRKAVEEGFRNKVIKVICCTPTLSAGLNLPCRRAII 356
Query: 287 IIRDSYVGRDFISLNMYK--QMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEP 344
Y I + + Q +GRAGR GL GE I+L K +D + + E
Sbjct: 357 RDIRRYSQNGLIDIPKLEIHQCIGRAGRPGLDPYGEGIILAKNEKDVEKAFLALTGPLEN 416
Query: 345 ISSHMDPPTLVDL-ILEVVAANLCSSLEDVKTLIKHTLF 382
I S + ++ + IL ++A S ++ IK+T +
Sbjct: 417 IYSKLSNQKVLRVHILGLIATLEIKSTSELINFIKNTFY 455
>gi|374982776|ref|YP_004958271.1| DEAD/DEAH box helicase [Streptomyces bingchenggensis BCW-1]
gi|297153428|gb|ADI03140.1| DEAD/DEAH box helicase domain-containing protein [Streptomyces
bingchenggensis BCW-1]
Length = 935
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 92/319 (28%), Positives = 149/319 (46%), Gaps = 35/319 (10%)
Query: 28 GQYPPTKRQLNKKSIYICTIEKGSKL--IGSLIQENRIDEIGLIVIDEFHMLNEPQRGPI 85
G+Y + +++ T EK + GSL + E+G +++DE H+L +P RGP+
Sbjct: 252 GEYAVDTELIRTADLWVATTEKFEAISRTGSL--RAALAEVGCLIVDEIHLLGDPTRGPV 309
Query: 86 LECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQ 145
LE ++++V ++I +SAT+ N ++ ++ RPT+ + + V
Sbjct: 310 LEALLARVREDSAQVRIAGLSATVANAGQVADWLGARLIRSPWRPTRLTWQLPVLPNAAD 369
Query: 146 SFDGKSLTEIY---ADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRLQFD 202
+ + + + A L ++T +G G+ VL+FC SK AL L D
Sbjct: 370 APEWNARAQARTAEAVRLTRAITTTG---------GS--VLVFCGSKRGVRATALALAAD 418
Query: 203 RFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYL 262
R T+ + E L+E L C GV H+ D +R E A+
Sbjct: 419 RGVPTRGADTDDSE-LVERL--------------CTRAGVRLHYRDWP--YKRESEHAFR 461
Query: 263 AGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGRDFISLNMYKQMVGRAGRTGLQESGESI 322
I+ TST+AAGVNLPA+ VI+RD+ VG D I ++M +QM GRAGR G E
Sbjct: 462 TRQADILVATSTVAAGVNLPARAVIVRDTQVGMDRIEVSMVQQMFGRAGRVGAGEREGWA 521
Query: 323 MLCKTMQDFLRFSSMMNAG 341
L + + + + + AG
Sbjct: 522 YLLTSPTERAPWQARLAAG 540
>gi|7508862|pir||T34471 hypothetical protein W03A3.3 - Caenorhabditis elegans
Length = 273
Score = 126 bits (316), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 95/282 (33%), Positives = 137/282 (48%), Gaps = 30/282 (10%)
Query: 68 LIVIDEFHMLNEPQRGPILECVVSKVLYLKKS----IQIFAMSATIGNINALSTFIEGIT 123
+IV+DE HM+ + RG +E ++SKVL +S ++I MSATI + + +++G
Sbjct: 1 MIVVDEMHMVFDSSRGAHIEHMLSKVLLWNQSALEKVRIIGMSATIPELYRIGKWLDGAK 60
Query: 124 YVENS-RPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMV 182
E RP ++ + + +S D K L E D L S + N
Sbjct: 61 VFEARFRPIVLQNHIVIGSELRKSGDNKVLREFSEDPLILLTEES--------FRRNSQT 112
Query: 183 LIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKL------------ 230
L+ SSK+ AL + RF E K + L+E LKE +G L
Sbjct: 113 LVMISSKLDAEKTALNIA-SRF---HEINKTDS-SLLEILKERANGLLFIKHGLERNGCK 167
Query: 231 STNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRD 290
N+ + +GVAYHHA LT ER IE + + I+ TSTLA+GVNLPA+RV+I+
Sbjct: 168 DRNVMSTLAWGVAYHHAGLTMEERECIELGFREKNIVILVATSTLASGVNLPAERVLIKA 227
Query: 291 SYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFL 332
G ++ Y+QMVGRAGRTG G S K+ +L
Sbjct: 228 QPRGPSALTSLNYRQMVGRAGRTGHATRGTSSFPAKSSNKYL 269
>gi|157869866|ref|XP_001683484.1| putative DNA polymerase theta [Leishmania major strain Friedlin]
gi|68126549|emb|CAJ04910.1| putative DNA polymerase theta [Leishmania major strain Friedlin]
Length = 1881
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 68/145 (46%), Positives = 92/145 (63%), Gaps = 3/145 (2%)
Query: 231 STNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRD 290
++ L E I +GVA+HH L A ER LIE A+ ++I+CCTSTLAAGVNLPA+RVII+
Sbjct: 1246 ASQLSEVIAFGVAFHHGGLLAEERDLIETAFRRKHIRILCCTSTLAAGVNLPARRVIIKT 1305
Query: 291 SYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHM- 349
YVGR+F++ + Y QM GRAGR GL GES +L + +D R ++M+A EP SS +
Sbjct: 1306 PYVGREFLTKSRYLQMCGRAGRAGLDPYGESFLLLSS-RDQARGHALMHAAVEPCSSKLL 1364
Query: 350 -DPPTLVDLILEVVAANLCSSLEDV 373
D L +LE V L + +
Sbjct: 1365 EDDQALTRSLLECVGVGLVADFQSA 1389
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 58/101 (57%), Gaps = 4/101 (3%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+ EK +L + F ++ + G G++P + ++Y+CTIEK + L+ +++E
Sbjct: 926 LAEEKTMALQPLTTAYDFNVDGHYGSSGRFPLS----GAPAVYVCTIEKANSLLNHMLEE 981
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQ 101
R DEIG +V+DE HM+ E RG LE +SKVL + + Q
Sbjct: 982 GRTDEIGAVVVDELHMVGESGRGATLELFLSKVLVINAARQ 1022
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 130/272 (47%), Gaps = 25/272 (9%)
Query: 424 LTSIAKAAVQAGLSHDVCLIIYSDLLH-NKLNFCLLNSLHMLFLVIPLEYRIPSDGILLS 482
+TS ++V++ S + L++ ++L L + LH+ + + PL D LL
Sbjct: 1599 VTSFGSSSVRSCFSVEEALLLRAELDELRHTGLILSDDLHLCYFLTPLREVGKCDWELLR 1658
Query: 483 --RSKVYDRYTKFHPQTLRVAEALGVTENLV---ALNVTGKLK---DEKKALLC--RFFH 532
S++ D R+A LGV V A+ + G L+ + ++ L RF+
Sbjct: 1659 LMMSRMSDSRQ-------RIASLLGVDAYFVDQQAMGLGGPLQATEEGRRRLFTARRFYV 1711
Query: 533 ACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELWCYKQLLTD 592
A +L DVL V + Y + LQN + S F+S + FC + E + + +L+
Sbjct: 1712 ALMLADVLAEVPMATVEQRYNVSRGQLQNLMRSASMFSSSITSFCHAM-EWFSLEAVLSS 1770
Query: 593 LPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIARADAKEMVAKIRHLPLRS 652
+ L + P+L LM++ G++ RAR L +AG+ L IA ADA +MV+K++ + +
Sbjct: 1771 FVKRLGFGVKPDLLPLMEIRGMQPPRARALWSAGFKKLAAIAAADADDMVSKVKSMNPKD 1830
Query: 653 ARNLISAAKLHFITKMDKVEAMKNLIQNLQKN 684
++ AAK F TK + A++ LQ
Sbjct: 1831 SK----AAK--FFTKRSALMAIREANLALQSQ 1856
>gi|116207066|ref|XP_001229342.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
gi|88183423|gb|EAQ90891.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
Length = 2209
Score = 125 bits (314), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 131/491 (26%), Positives = 236/491 (48%), Gaps = 63/491 (12%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V E+ + K + + + E G + TK+Q+++ + + T EK +
Sbjct: 598 LVQEQVGNFGKRLQPYGIKVSELTGDRQL---TKQQISETQVIVTTPEKWDVITRKATDI 654
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVL----YLKKSIQIFAMSATIGNINALS 116
+ + + LI+IDE H+L++ RGP+LE VVS+ + + ++I +SAT+ N ++
Sbjct: 655 SYTNLVRLIIIDEIHLLHD-DRGPVLESVVSRTIRKTEQTGEPVRIVGLSATLPNYRDVA 713
Query: 117 TFI-----EGITYVENS-RPTK-HSEYVTV-DKRVFQSFDGKSLTEI-YADNLDYSLTGS 167
+F+ +G+ + + S RP E++ V DK+ + K++ +I Y L+
Sbjct: 714 SFLRVDFEKGMFHFDGSFRPCPLRQEFIGVSDKKAIKQL--KTMNDITYQKVLE------ 765
Query: 168 GPDAVLHLVQGNLMVLIFCSSKIACSNLA--LR---LQFDRFPGTKEYKKQEKEDLIEAL 222
H+ Q +L+F S+ + A +R L+ + ++ +E L EA
Sbjct: 766 ------HVGQNRHQMLVFVHSRKETAKTAKYIRDKALEMETIDQILKHDAGTREVLSEAA 819
Query: 223 KEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLP 282
N+ T+L++ + YG HHA +T +R +EE + +G +Q++ CT+TLA GVNLP
Sbjct: 820 NSVNN----TDLKDILPYGFGIHHAGMTREDRTDVEELFASGHIQVLVCTATLAWGVNLP 875
Query: 283 AQRVIIRDSYV----GRDFISLNMYK--QMVGRAGRTGLQESGESIMLCKTMQDFLRFSS 336
A VII+ + V ++ L+ QM+GRAGR + GE I++ T + + S
Sbjct: 876 AHTVIIKGTQVYSPEKGSWVELSPQDVLQMLGRAGRPQFDKYGEGIIIT-TQGEIPYYLS 934
Query: 337 MMNAGPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQ-LKSP------- 388
++N PI S + + +L E+V N+ + E V+ L LF + L+SP
Sbjct: 935 LLNQQ-LPIESQLASKLVDNLNAEIVLGNIRTRDEGVEWLGYTYLFVRMLRSPGLYSVGA 993
Query: 389 --EDQQTFLETTLSEIVASLLA--SKGTMLTMNE-AGHLSLTSIAKAAVQAGLSHDVCLI 443
ED LE ++V S A K ++ +E G L T + + A ++H +
Sbjct: 994 EYEDDGA-LEQKRVDLVHSAAAVLKKSNLVKYDEKTGKLQSTELGRIASHYYITH-TSMD 1051
Query: 444 IYSDLLHNKLN 454
Y+ L+ +N
Sbjct: 1052 TYNKLIQPAMN 1062
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 75/344 (21%), Positives = 150/344 (43%), Gaps = 48/344 (13%)
Query: 63 IDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKS----IQIFAMSATIGNINALSTF 118
+ + L + DE H+L Q G I E +VS++ Y++ ++I +S ++ N + +
Sbjct: 1500 VQTVELFIADELHLLGG-QMGYIYEIIVSRMHYIRTQTELPMRIVGLSVSLANARDVGEW 1558
Query: 119 IEGITY-VENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQ 177
I+ + + N P H V ++ + +S T + +L ++ AV L
Sbjct: 1559 IDAKKHDIYNFSP--HVRPVPLELHI------QSYTIPHFPSLMLAMAKPTYLAVTQL-S 1609
Query: 178 GNLMVLIFCSSKIACSNLALRL--------QFDRFPGTKEYKKQEKEDLIEALKEENDGK 229
N LIF ++ A L DRF + ++ ++ L++ ++EE
Sbjct: 1610 ANQPALIFVPNRKQTRATARDLLTACLADDDEDRFLHVEVHQIRK---LLDRVQEEA--- 1663
Query: 230 LSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIR 289
L E + +GV Y+H L+ ++R+++ Y G +Q++ + + ++ A VI+
Sbjct: 1664 ----LAEALSHGVGYYHEALSQSDKRIVKHLYKNGAIQVLIASRDVCWELDCTAHLVIVM 1719
Query: 290 DS--YVGRDF----ISLNMYKQMVGRAGRTGLQESGES---IMLCKTMQDFLRFSSMMNA 340
+ + GR+ L+ QM G+A + + G S +ML +++ + +N
Sbjct: 1720 GTQYFEGREHRYVDYPLSEVLQMFGKAVQPS--KDGRSRGVLMLPAVKREY--YKKFLNE 1775
Query: 341 GPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQ 384
P+ SH+ L D + ++ + S ED T FY+
Sbjct: 1776 A-LPVESHLH-NFLYDAFVTEISTKMIESGEDAINWATFTYFYR 1817
>gi|18977049|ref|NP_578406.1| ski2-like helicase [Pyrococcus furiosus DSM 3638]
gi|397651182|ref|YP_006491763.1| ski2-like helicase [Pyrococcus furiosus COM1]
gi|18202135|sp|O73946.1|HELS_PYRFU RecName: Full=Putative ski2-type helicase
gi|223365750|pdb|2ZJ2|A Chain A, Archaeal Dna Helicase Hjm Apo State In Form 1
gi|223365751|pdb|2ZJ5|A Chain A, Archaeal Dna Helicase Hjm Complexed With Adp In Form 1
gi|223365752|pdb|2ZJ8|A Chain A, Archaeal Dna Helicase Hjm Apo State In Form 2
gi|223365753|pdb|2ZJA|A Chain A, Archaeal Dna Helicase Hjm Complexed With Amppcp In Form 2
gi|3374506|dbj|BAA32016.1| helicase [Pyrococcus furiosus]
gi|18892686|gb|AAL80801.1| helicase [Pyrococcus furiosus DSM 3638]
gi|393188773|gb|AFN03471.1| ski2-like helicase [Pyrococcus furiosus COM1]
Length = 720
Score = 125 bits (314), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 109/371 (29%), Positives = 169/371 (45%), Gaps = 38/371 (10%)
Query: 28 GQYPPTKRQLNKKSIYICTIEKGSKLI--GSLIQENRIDEIGLIVIDEFHMLNEPQRGPI 85
G Y L K I I T EK L+ GS + I ++ ++V DE H++ RG
Sbjct: 103 GDYDSKDEWLGKYDIIIATAEKFDSLLRHGS----SWIKDVKILVADEIHLIGSRDRGAT 158
Query: 86 LECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQ 145
LE +++ +L QI +SATIGN L+ ++ V + RP K V +Q
Sbjct: 159 LEVILAHML---GKAQIIGLSATIGNPEELAEWLNAELIVSDWRPVKLRRGV-----FYQ 210
Query: 146 SFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRLQFDRFP 205
F + ++ S + V ++ LIF + + +AL L
Sbjct: 211 GF-------VTWEDGSIDRFSSWEELVYDAIRKKKGALIFVNMRRKAERVALEL------ 257
Query: 206 GTKEYKKQEKEDLIEALKEENDG----KLSTNLEECILYGVAYHHADLTAGERRLIEEAY 261
+K+ K + I AL E D + L + I GVA+HHA L ER L+EE +
Sbjct: 258 -SKKVKSLLTKPEIRALNELADSLEENPTNEKLAKAIRGGVAFHHAGLGRDERVLVEENF 316
Query: 262 LAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGRDF----ISLNMYKQMVGRAGRTGLQE 317
G ++ + T TL+AG+N PA RVIIRD + DF I + QM+GRAGR E
Sbjct: 317 RKGIIKAVVATPTLSAGINTPAFRVIIRDIWRYSDFGMERIPIIEVHQMLGRAGRPKYDE 376
Query: 318 SGESIMLCKTMQDFLRFSSMMNAGPEPISSHM-DPPTLVDLILEVVAANLCSSLEDVKTL 376
GE I++ + + + PE + S + + L +L ++A S++E++
Sbjct: 377 VGEGIIVSTSDDPREVMNHYIFGKPEKLFSQLSNESNLRSQVLALIATFGYSTVEEILKF 436
Query: 377 IKHTLF-YQLK 386
I +T + YQ K
Sbjct: 437 ISNTFYAYQRK 447
>gi|123478324|ref|XP_001322325.1| Type III restriction enzyme, res subunit family protein
[Trichomonas vaginalis G3]
gi|121905169|gb|EAY10102.1| Type III restriction enzyme, res subunit family protein
[Trichomonas vaginalis G3]
Length = 1042
Score = 125 bits (314), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 112/384 (29%), Positives = 186/384 (48%), Gaps = 45/384 (11%)
Query: 39 KKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKK 98
+ +I ICT EK L+ S IQ I LI+IDE HM+ E RG ++E ++ K +
Sbjct: 176 RGNIAICTYEKAHALLNSAIQGGYSHSIKLIIIDEVHMIGEEGRGSVIEALILKAKLMND 235
Query: 99 SIQIFAMSATIG--NINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIY 156
++ ++ATI + L+ +I+G T++ +RPT K++ + DG SL I
Sbjct: 236 KPRLITLTATINESDCQKLANWIDGNTFIWRTRPTPI-------KQIIKKQDG-SLNLIT 287
Query: 157 AD-NLDYSLT-GSGPDAVLHLV---------QGNLMVLIFCSSK---IACSNLALRLQFD 202
+ NL LT S D HL+ + + V++F +++ I SNL + ++
Sbjct: 288 NEGNLQKILTIKSSNDDKDHLMPLIRTLLSKKPDSSVIVFVNTRNDTINISNLISKYMYN 347
Query: 203 ---RFPGTKEYKKQ---EKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRL 256
P K+ ++ + LI+ L N G + N CI GV +HH L +R+L
Sbjct: 348 DKINLPKLKQPSEELINRRNKLIKDLA-ANSGIIDENTANCIKSGVLFHHGGLLMEDRKL 406
Query: 257 IEEAYLAGTLQIICCTSTLAAGVNLPA-QRVIIRDSY----VGRDFISLNMYKQMVGRAG 311
IEEA T+ ++ T+TL+AGVN+ RVII + Y + + + Y QMVGRAG
Sbjct: 407 IEEAARNKTINVLVATTTLSAGVNIHGVARVIIHNIYRYNQKKKQLMPASQYTQMVGRAG 466
Query: 312 RTGLQESGESIMLCKT-----MQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAANL 366
R+GL GE+ + K+ + D L S N P+ + +D + L+ +A L
Sbjct: 467 RSGL--PGEAFICMKSNNQSEINDILNLSK--NKIPDIVPHLLDGESTDKFFLQCLAIKL 522
Query: 367 CSSLEDVKTLIKHTLFYQLKSPED 390
++T +++ + + E+
Sbjct: 523 LRPDNGLRTFVENCFTFASSNKEE 546
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 97/220 (44%), Gaps = 19/220 (8%)
Query: 422 LSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVI-PLEYR-----IP 475
+ +T A + LS + I+ + + N C+ + +H+L L I PL +P
Sbjct: 770 MKVTKFGMAVAGSSLSVEEGKILKKIISKTEENLCISDEIHLLSLCISPLSVSNSVKSLP 829
Query: 476 SDGILLSRSKVYDRYTKFHPQTLRVAEALGVTE-----NLVAL-NVTGKLKDEKKALLCR 529
D +L R ++ + H ++V + + +LV + G++ + L R
Sbjct: 830 YDSPILIR--IFSQ----HRHVIKVVTGMNDAQIEHMQDLVKIYGGNGRINPAIDSDLDR 883
Query: 530 FFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELWCYKQL 589
F A IL +++N ++++KM+ I +Q + +A ++ RFC E+
Sbjct: 884 IFAAVILKELINEVPMKEISKMFQIDFGSIQKLQMEAATYAGQINRFC-EITGSVVLAGA 942
Query: 590 LTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSS 629
L Q L + +L ALM +P AR+L++ G ++
Sbjct: 943 LNKFRQRLNFAARTDLLALMSIPSCSRDTARKLVDKGINT 982
>gi|365983346|ref|XP_003668506.1| hypothetical protein NDAI_0B02280 [Naumovozyma dairenensis CBS 421]
gi|343767273|emb|CCD23263.1| hypothetical protein NDAI_0B02280 [Naumovozyma dairenensis CBS 421]
Length = 2190
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 114/390 (29%), Positives = 193/390 (49%), Gaps = 40/390 (10%)
Query: 23 YAGVK-----GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHML 77
Y G+K G +R++++ I + T EK + + + ++E+ LI+IDE H+L
Sbjct: 610 YLGIKVSELTGDTRLNRREISETHILVSTPEKWDIITRKVEDTSFVEEVRLIIIDEVHLL 669
Query: 78 NEPQRGPILECVVSKVLY---LKKSIQIFAMSATIGNINALSTFI----EGITYVENS-R 129
++ RGP++E +V++ L+ L++ +I A+SAT+ N + F+ +G+ Y ++S R
Sbjct: 670 HDA-RGPVIESIVARTLWSQQLRERPRIVALSATLPNYKDVGKFLRVPADGLFYFDSSFR 728
Query: 130 PTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSK 189
P S Q F G + E A ++ + D VL V V++F S+
Sbjct: 729 PCPLS----------QQFCG--IKEQNAVKRLSAMNQACYDKVLESVSEGHQVIVFVHSR 776
Query: 190 IACSNLALRLQFDRFPGTKEYKKQEKEDL--IEALKEENDGKLSTNLEECILYGVAYHHA 247
+ A L+ ++F + K K D +E LK E++ +L+ + G+ HHA
Sbjct: 777 KDTARTAKWLK-NQFTESDNINKIIKSDTSSVEILKRESETVQDLSLKSILTSGIGIHHA 835
Query: 248 DLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGR------DFISLN 301
LT +R L E+ + G LQ++ T+TLA GVNLPA VII+ + V + +S
Sbjct: 836 GLTRADRSLSEDLFADGLLQVLVSTATLAWGVNLPAHTVIIKGTEVYSPEKGIWEQLSPQ 895
Query: 302 MYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEV 361
QM+GRAGR GE I++ QD + +++N PI S + +L E+
Sbjct: 896 DILQMLGRAGRPRYDTHGEGIIIT-NQQDVQYYLAVLNQQL-PIESQFISRLIDNLNAEI 953
Query: 362 VAANLCSSLEDVKTLIKHTLFY--QLKSPE 389
V ++ ++ D T I +T Y L SP+
Sbjct: 954 VFGSV-KNMNDALTWISYTYLYVRMLVSPD 982
>gi|402078073|gb|EJT73422.1| hypothetical protein GGTG_10260 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 2210
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 123/475 (25%), Positives = 224/475 (47%), Gaps = 62/475 (13%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V E+ + K E F + E G + TK+Q+ + I + T EK +
Sbjct: 592 LVQEQVGNFGKRLEPFGIKVSELTGDRQL---TKQQIAETQIIVTTPEKWDVITRKATDL 648
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVL----YLKKSIQIFAMSATIGNINALS 116
+ + + L++IDE H+L++ RGP++E VVS+ + + ++I +SAT+ N ++
Sbjct: 649 SYTNLVRLVIIDEIHLLHD-DRGPVIESVVSRTIRRTEQTGEPVRIIGLSATLPNYKDVA 707
Query: 117 TFI-----EGITYVENS-RPTK-HSEYVTV-DKRVFQSFDGKSLTEIYADNLDYSLTGSG 168
+F+ +G+ + + S RP E++ V DK+ + K++ +I +
Sbjct: 708 SFLRVDSQKGLFHFDGSFRPCPLRQEFIGVSDKKAIRQL--KTMNDITYTKV-------- 757
Query: 169 PDAVLHLVQGNLMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLI-------EA 221
+ H+ + +LIF S+ + A R+ K + + D++ E
Sbjct: 758 ---MEHVGKNRNQMLIFVHSRKETAKTA------RYIRDKALEMETINDILKHDAGSREI 808
Query: 222 LKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNL 281
LKE D +L++ + YG HHA ++ +R +EE + G++Q++ CT+TLA GVNL
Sbjct: 809 LKESADQANDRDLKDLLPYGFGIHHAGMSRADRTDVEELFADGSIQVLVCTATLAWGVNL 868
Query: 282 PAQRVIIRDSYV----GRDFISLNMYK--QMVGRAGRTGLQESGESIMLCKTMQDFLRFS 335
PA VII+ + V ++ L+ QM+GRAGR GE I++ T + +
Sbjct: 869 PAHTVIIKGTQVYSPEKGSWVELSPQDVLQMLGRAGRPQFDTYGEGIIIT-TQNEMTYYL 927
Query: 336 SMMNAGPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQ-LKSP------ 388
S++N PI S + + +L E+V N+ + E V+ L LF + L+SP
Sbjct: 928 SLLNQQ-LPIESQLVSKLVDNLNAEIVLGNIRNRDEGVEWLGYTYLFVRMLRSPGLYQVG 986
Query: 389 ---EDQQTFLETTLSEI-VASLLASKGTMLTMNE-AGHLSLTSIAKAAVQAGLSH 438
ED + + + I A+ + K ++ +E G L T + + A ++H
Sbjct: 987 AEYEDDEALEQKRVDLIHSAATVLRKSNLVKYDEKTGKLQATELGRIASHYYITH 1041
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 76/374 (20%), Positives = 153/374 (40%), Gaps = 50/374 (13%)
Query: 37 LNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYL 96
L K + + T + L + + + L + DE HML+ Q G I E +VS++ Y+
Sbjct: 1468 LEKGDLILATPTQWDVLSRQWKRRKNVQTVELFIADELHMLSG-QLGFIYELIVSRMHYI 1526
Query: 97 KKS----IQIFAMSATIGNINALSTFIEGITY-VENSRPTKHSEYVTVDKRVFQSFDGKS 151
+ S I++ +S ++ N + +++ + V N P H V ++ + QSF
Sbjct: 1527 RSSTELPIRMVGLSVSLSNARDIGEWLDCKKHDVYNFSP--HVRAVPLELHL-QSFTIPH 1583
Query: 152 LTEIYADNLDYSLTGSGPD-AVLHLVQGNLMVLIFCSSKIACSNLALRL--------QFD 202
+ L + P A + + + ++F ++ A L D
Sbjct: 1584 FPSLM-------LAMAKPTYATITQMSADRPAIVFVPTRKQTRATARDLLTACLADDDED 1636
Query: 203 RFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYL 262
RF +E ++ D L E + +GV Y+H L+ +RR+++ Y
Sbjct: 1637 RFLHVD----------VEQIQPLLDKTQEDALRESLSHGVGYYHEALSLTDRRIVKHLYD 1686
Query: 263 AGTLQIICCTSTLAAGVNLPAQRVIIRDS--YVGRDF----ISLNMYKQMVGRAGRTGLQ 316
G +Q++ + + ++ A V++ + + GR+ ++ QM G+A R G
Sbjct: 1687 KGAIQVLVASRDVCWELDSTAHLVVVMGTQYFEGREHRYVDYPVSDVLQMFGKALRPGKD 1746
Query: 317 ESGESI-MLCKTMQDFLRFSSMMNAGPEPISSHMDPPT-----LVDLILEVVAANLCSSL 370
G + ML ++F + +N P+ S + + L D + ++ + S
Sbjct: 1747 GRGRGVLMLPAVKREF--YKKFLNEAI-PVESVLAEQSQNHAYLHDAFVTEISTKMIESG 1803
Query: 371 EDVKTLIKHTLFYQ 384
+D + + T FY+
Sbjct: 1804 DDALSWLTFTYFYR 1817
>gi|395768137|ref|ZP_10448652.1| DEAD/DEAH box helicase [Streptomyces acidiscabies 84-104]
Length = 782
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 99/370 (26%), Positives = 174/370 (47%), Gaps = 52/370 (14%)
Query: 26 VKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPI 85
+ G++ + Q+ + ++I T EK L + + ++G +V+DE H+L +P RGP+
Sbjct: 98 LSGEHATDQEQIKQADVWISTTEKFEALCRAASMRQTLADVGCLVVDEIHLLGDPVRGPV 157
Query: 86 LECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKR--- 142
LE ++++V ++I +SAT+ N ++ ++ H+E V V R
Sbjct: 158 LEALLARVRETASEVRIVGLSATVSNAEDIAEWL-------------HAELVRVIWRPTR 204
Query: 143 -VFQ------SFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNL 195
V+Q SFD ++ ++ N +T A+ QG+ VL+FC SK
Sbjct: 205 LVWQLPLLPVSFD-RAAQQLARTNAAVRIT-----AMFVKEQGS--VLVFCGSKRNVRTT 256
Query: 196 ALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERR 255
AL + +R T + + + + + +E GV H++D +R
Sbjct: 257 ALAIAANRGASTTKVDPDDADQVHQVCREA---------------GVGLHYSDWP--YKR 299
Query: 256 LIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGRDFISLNMYKQMVGRAGRTGL 315
+ ++ TSTLAAGVNLPA+ V++RD+ +G D I ++M +QM GRAGR G
Sbjct: 300 DTVADFDRRETDVVVATSTLAAGVNLPARAVVVRDTRIGLDDIEVSMVQQMFGRAGRAGA 359
Query: 316 QE-SGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAANLCSSLEDVK 374
E G + +L + L + + + AG +SS + +L D +L V +++ +
Sbjct: 360 GEREGWAYLLTDEAERPL-WQAKLAAG-YTVSSQIG-NSLPDHVLAEVVQRRITTVREAY 416
Query: 375 TLIKHTLFYQ 384
K TL Y
Sbjct: 417 AWWKQTLAYH 426
>gi|145481097|ref|XP_001426571.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124393647|emb|CAK59173.1| unnamed protein product [Paramecium tetraurelia]
Length = 2065
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 128/458 (27%), Positives = 223/458 (48%), Gaps = 67/458 (14%)
Query: 16 FKFYLEEY----AGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVI 71
F+ LE Y A V G TK QLN + I T EK L Q + I + L++I
Sbjct: 512 FQNRLEPYNIKVAEVTGDTHLTKHQLNTIQVLIATPEKWDILTRKTQQNDFIQLVRLVII 571
Query: 72 DEFHMLNEPQRGPILECVVSKVLY----LKKSIQIFAMSATIGNINALSTFIE----GIT 123
DE H+L++ RGP++E ++++ L ++ +++ +SAT+ N ++TFI G+
Sbjct: 572 DEIHLLHDS-RGPVIESIIARTLKSMEERQEYVRVVGLSATLPNYADVATFIRVKQSGVF 630
Query: 124 YVENS-RPTK-HSEYVTVD-----KRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLV 176
+ +NS RP +Y+ ++ +R+ + E+ + + +T S
Sbjct: 631 FFDNSFRPVPLQQQYIGINEMKPIRRML------LMNEVLYEKVIERITKS--------- 675
Query: 177 QGNLMVLIFCSSK---IACSNLALRLQFDRFPGTKEYKKQEK-EDLIEALKEENDGKLST 232
+L+F S+ + + + + F + +K K++ + ++E + + D K S+
Sbjct: 676 ----QILVFVHSRKETVKTAKILKEMAFSKDELSKFIKEESSSKKILETVIAQEDIK-SS 730
Query: 233 NLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSY 292
+L+E + G+ HHA L G+R L+E + +QI+ TSTLA GVNLPA VII+ +
Sbjct: 731 DLKELLASGIGIHHAGLCRGDRDLVESLFEKKNIQILISTSTLAWGVNLPAHTVIIKGTQ 790
Query: 293 V-----GRDFISLNMYK--QMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPI 345
+ G+ +I L+ QM+GRAGR SGE I+L T Q+ + S++N PI
Sbjct: 791 IYSPEQGK-WIELSPQDILQMMGRAGRPRYDTSGEGIILT-TYQELKYYLSLLNMQL-PI 847
Query: 346 SSHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFY--QLKSPE-------DQQTFLE 396
S L EV N+ +L+D + +T Y L++P + +L
Sbjct: 848 ESQFITQLADQLNAEVAQGNI-KNLKDGVNWLAYTYLYVRMLRNPTLYNIPDFNNDQYLI 906
Query: 397 TTLSEIV--ASLLASKGTMLTMN-EAGHLSLTSIAKAA 431
++++ ASLL K ++T + +AG+ T + K A
Sbjct: 907 KYRADLLHSASLLLDKNNLITYDKKAGNFESTILGKIA 944
>gi|325959641|ref|YP_004291107.1| DEAD/DEAH box helicase [Methanobacterium sp. AL-21]
gi|325331073|gb|ADZ10135.1| DEAD/DEAH box helicase domain protein [Methanobacterium sp. AL-21]
Length = 690
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 96/350 (27%), Positives = 171/350 (48%), Gaps = 34/350 (9%)
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIE 120
N ++++ L+V+DEFHM+ E RGP +EC +++ L ++I A+SAT+ N+ LS++++
Sbjct: 122 NTLNDVDLLVVDEFHMIGEYSRGPTMECAITRSKQLNPGMRIVALSATLQNMGDLSSWLD 181
Query: 121 GITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNL 180
+ RP + D + + K+ ++ L+ S+ S
Sbjct: 182 AHVVEHDFRPVP----LYKDVLTTEEMETKNKNDVIVKILNTSIKESS------------ 225
Query: 181 MVLIFCSSKIACSNLAL----RLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLST---- 232
L+F S++ +LA +++ P K+ + E +++ ++ G L T
Sbjct: 226 QALVFVSTRRFTESLAKYTSDKVKRKLSPEQKKAFHEVSEKILDVPRKR--GSLPTAVCL 283
Query: 233 NLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRD-- 290
L E I GVA+HHA L ++ +IE+ + AG L +I T +L GVNLP++ V+IRD
Sbjct: 284 KLAESIENGVAFHHAGLFDKQKEIIEDEFRAGNLLMITATPSLMYGVNLPSKNVVIRDYT 343
Query: 291 --SYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGP-EPISS 347
+ G I + Y+QM GRAGR G G S ++ KT+ + G EP +S
Sbjct: 344 RWTSQGPQPIPVFDYEQMSGRAGRPGYDTEGYSYLIAKTLDEAYNLKDHYVYGEIEPTNS 403
Query: 348 HM--DPPTLVDLILEVVAANLCSSLEDVKTLIKHTLF-YQLKSPEDQQTF 394
+ + + I+ VA+ L + +D+ T + +Q+ E ++F
Sbjct: 404 KLIENKDAVYRQIITQVASTLAKTPKDLFKFFLETFYGWQMSHNEYLESF 453
>gi|255513991|gb|EET90255.1| DEAD/DEAH box helicase domain protein [Candidatus Micrarchaeum
acidiphilum ARMAN-2]
Length = 708
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 105/391 (26%), Positives = 186/391 (47%), Gaps = 36/391 (9%)
Query: 14 EEFKFYLEEYAGVK-----GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGL 68
E+F + E Y +K G + + + L + + EK L+ ++ ++ +G
Sbjct: 85 EKFSEFKEAYPYLKAAISTGDFDSSDQWLADYELIFVSTEKLDSLMRHRME--WVNSVGC 142
Query: 69 IVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVENS 128
I+ DE H+L + RGP LE +++K+ L+ IQI A+SATIGN + ++ ++ + +
Sbjct: 143 IIFDEVHLLGDQYRGPTLELLMTKLKDLR-GIQIVALSATIGNADEIADWLGARLVISDY 201
Query: 129 RPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMV----LI 184
RP K + +++ DG L E + L G +++ L++ L+
Sbjct: 202 RPVKLLKGAVASGKIYY-VDGDRLAEGTME-----LRGEADTNEERVLEDTLLLGKQALV 255
Query: 185 FCSSKIACSNLALRLQ--FDRFPGTKEYKKQEK--EDLIEALKEENDGKLSTNLEECILY 240
F S+K + RL +RF E K K ++ L + + L E +L+
Sbjct: 256 FYSTKRNAEAGSQRLSKISERFISEDERKSLAKIGNAVLNVLDKPT--QQCVKLSEVLLH 313
Query: 241 GVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRD-----SYVGR 295
G A+HH+ L +R IE A+ +G ++++C T+TL GVN+PA V+IRD Y
Sbjct: 314 GAAFHHSGLLPAQRNYIESAFKSGQIKVVCSTTTLGFGVNMPAHTVLIRDISRHNGYTS- 372
Query: 296 DFISLNMYKQMVGRAGRTGLQESGESIMLCKT---MQDFLRFSSMMNAGPEPISSHMDP- 351
+ I +N Q++GRAGR G +++ + D + + + A PEPI S++
Sbjct: 373 ERIGVNEVLQLLGRAGRPKYDTEGRALISAGSEGMAADLV--NEYLVAEPEPIYSNLGIL 430
Query: 352 PTLVDLILEVVAANLCSSLEDVKTLIKHTLF 382
P L IL +A S++ + + T +
Sbjct: 431 PILRMHILSFIAEGFLDSMQGINEFLSKTFY 461
>gi|221058763|ref|XP_002260027.1| helicase [Plasmodium knowlesi strain H]
gi|193810100|emb|CAQ41294.1| helicase, putative [Plasmodium knowlesi strain H]
Length = 1042
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 138/262 (52%), Gaps = 24/262 (9%)
Query: 68 LIVIDEFHMLNEPQRGPILECVVSKVLYLKKS------IQIFAMSATIGNINALSTFIEG 121
+ VIDE H +N+ RG +E +++K+ Y++K+ I+++ SAT+ N++ + +++
Sbjct: 379 IFVIDEIHYMNDSHRGVFIESMLTKIKYIQKNCESIFKIRVYGFSATLSNVHQIGEWLDA 438
Query: 122 ITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLM 181
+V + ++ +++ DGK L NL+ + PD ++ L+ L+
Sbjct: 439 KVHVSKEKLQNIKHLYKINNAIYKDIDGKELER----NLEAPFS-LDPDHLVFLLSEELI 493
Query: 182 ----VLIFCSSKIACSNLALRLQF-------DRFPGTKEYKKQEKEDLIEALKEENDGKL 230
VLIFC +K C +A + +R K+ Q + +L+ LKE +
Sbjct: 494 LQRNVLIFCPTKKKCEKVAYFISNIMPYYLKNRNYNVKKEMVQRRVNLVNQLKEV--SVV 551
Query: 231 STNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRD 290
+E+ IL G+ YHHADL + ER ++E A+ + TL +CCT+TL+ GV+ +IIR+
Sbjct: 552 MPAMEKLILSGIFYHHADLQSKERGIVEGAFRSNTLFCLCCTTTLSVGVSFNVHTIIIRN 611
Query: 291 SYVGRDFISLNMYKQMVGRAGR 312
+G F++ + Q+ GR GR
Sbjct: 612 IRLGTKFLTKDQIMQISGRCGR 633
>gi|328870919|gb|EGG19291.1| DEAD/DEAH box helicase [Dictyostelium fasciculatum]
Length = 2224
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 99/350 (28%), Positives = 172/350 (49%), Gaps = 37/350 (10%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V E Q+ + +++ ++E G +G T +Q+++ I + T EK + +
Sbjct: 609 LVQEMVQNFSNRLKDYGIVVKELTGDQGL---TNKQISETQIIVTTPEKWDIITRKAGER 665
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQ----IFAMSATIGNINALS 116
+ L++IDE H+L++ +RGP+LEC+V++ L + +S Q + +SAT+ N ++
Sbjct: 666 AYTSLVRLVIIDEIHLLHD-ERGPVLECIVARTLRMVESTQEMVRLVGLSATLPNYEDVA 724
Query: 117 TFI----EGITYVENS-RPTK-HSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPD 170
TF+ EGI Y ++S RP +Y+ V R F+ +++ ++ +
Sbjct: 725 TFLRVKPEGIFYFDSSYRPIPLEQQYIGVSDRGFKQL--QTMNDVTFKKVSER------- 775
Query: 171 AVLHLVQGNLMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKL 230
G +L+F S+ A ++ G + ++ D E L+ E +
Sbjct: 776 ------AGVNQMLVFVHSRRETGKTARDIRDRAVAGDLMGQLIKRADSREILRVEAEKTA 829
Query: 231 -STNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIR 289
S L+E + YG+ HHA L+ +R L+EE + LQ++ T+TLA GVNLPA VII+
Sbjct: 830 KSAELKELLPYGIGIHHAGLSRSDRTLVEELFADQHLQVLVSTATLAWGVNLPAHTVIIK 889
Query: 290 DSYV-----GRDFISLNMYKQMVGRAGRTGLQESGESIMLCKT--MQDFL 332
+ V G +S QM+GRAGR GE I++ MQ +L
Sbjct: 890 GTQVYNTERGWTELSPLDVTQMLGRAGRPPFDSEGEGIVITSASEMQFYL 939
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/332 (23%), Positives = 155/332 (46%), Gaps = 34/332 (10%)
Query: 37 LNKKSIYICTIEKGSKLIGSLIQEN-RIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLY 95
L I + T E+ L Q+N R+ + L ++DE M+ + G +E V+S++ Y
Sbjct: 1477 LEASRIIVTTAERWDILSRKWRQKNSRVQSVSLFIVDELQMIGSGESGSTMEIVLSRMRY 1536
Query: 96 LK----KSIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRV-FQSFDGK 150
+ I+ +S+ + N L+ ++ G T + H + V+ + Q FD
Sbjct: 1537 IATQTGSPIRFIGLSSPVANARDLAEWM-GATPA--TMFNFHPDVRPVEMEIQMQGFDYP 1593
Query: 151 SLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLA----LRLQFDRFPG 206
+ E ++T AV H+ + L++ ++ A +A L + +
Sbjct: 1594 NFQE-----RQMAMTKPALYAVSHMDR-TAQTLVYVPTRKAARQMAADIILFVDSEDDMN 1647
Query: 207 TKEYKKQEKEDLIEALKEENDGKL-STNLEECILYGVAYHHADLTAGERRLIEEAYLAGT 265
T+ Y ++ DL E + KL S L + +++GVA++H L+A ++R++E + +G
Sbjct: 1648 TRRYLGIDQADL-----EPHLAKLESPALRDALVWGVAFYHDGLSAKDKRIVEALFKSGA 1702
Query: 266 LQIICCTSTLAAGVNLPAQRVII-------RDSYVGRDFISLNMYKQMVGRAGRTGLQES 318
++++ T + +++ AQ VII + + G +N QM+ RAG+ G +
Sbjct: 1703 IKVLVATHSECWALDVQAQLVIIMGTQTYNQGTGAGHTDYPINDILQMMARAGKQGTDQK 1762
Query: 319 GESIMLCKTMQDFLRFSSMMNAGPEPISSHMD 350
G ++LC + + + + +N P P+ SH+D
Sbjct: 1763 GRCLLLCHSPKKEY-YKTFLNE-PLPVESHLD 1792
>gi|307106799|gb|EFN55044.1| hypothetical protein CHLNCDRAFT_134899 [Chlorella variabilis]
Length = 1781
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 160/699 (22%), Positives = 284/699 (40%), Gaps = 136/699 (19%)
Query: 41 SIYICTIEKGSKLIGSLIQENRIDEIG---LIVIDEFHMLNEPQRGPILECVVSKVLYLK 97
+ +CT E + L+ L Q++ +D G +V+DE HML + RG E +++K+ Y +
Sbjct: 350 GVLVCTCESANSLLNRL-QDSGVDPTGEFSCVVLDEAHMLQDSHRGAQYEMLLAKLRYKQ 408
Query: 98 KS------------------------------------IQIFAMSATIGNINALSTFIEG 121
++ +QI MSAT+ + + +
Sbjct: 409 RTAEEEPQKEMRQQQEDGDDASCENARGSQALLPPAQRLQIVCMSATLPGPGSFAKCLGA 468
Query: 122 ITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLM 181
Y+ + RP + + D + + + +D
Sbjct: 469 RCYITDFRPIALNHF----------LDPLCIATLCQEAVDE----------------RRK 502
Query: 182 VLIFCSSKIACSNLALRLQF---------DRFPGTKEYKKQEKEDLIEALKEENDGKLST 232
VL+FC++K A RL+ G +++ + L+ D S
Sbjct: 503 VLVFCATKALAVQEARRLKTLLHAPEQRSSAAAGESSRERRTRAHYAAQLRALGDPD-SL 561
Query: 233 NLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSY 292
L E + G AY H+ + + L+ +AY G + ++C T+TL++ VNLPA RV+ R ++
Sbjct: 562 ALAELVEGGAAYDHSKVPGTAKALVADAYREGAVAVLCTTTTLSSSVNLPAFRVVFRQAW 621
Query: 293 VGR--DFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLR---FSSMMNAGPEPISS 347
V ++++ Y QM GRAGR GL+E GE+ ++ + R S + + + ++S
Sbjct: 622 VATKGNWLTPQQYHQMAGRAGRKGLEEVGEAFLVLNPREPPPRQHLLSLISSDVAQAVAS 681
Query: 348 HMDP-----PT-LVDLILEVVAANLCSSLEDVKTLIKHTLFYQLKSPEDQQTFLETTLSE 401
++P P+ L +LE VA + EDV + H S D + L+ +
Sbjct: 682 RLEPEVAGTPSGLRGAMLEAVAGCGARTKEDVFRYL-HRCTIAAASARDMEA-LQQAAKD 739
Query: 402 IVASLLASKG----TMLTMNEAGH-LSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFC 456
+A L G M+ ++ H T + +A V + L + L+I +D+L
Sbjct: 740 ALAWLGKPDGQKELAMIEYSKDAHQYQPTPLGRAVVASALPMEEALVIRADMLRLSRRLS 799
Query: 457 LLNSLHMLFLVIPLEYRIPSDGILLSRSKVYDRYTKFHPQTLRVAEAL---GVTENLVAL 513
LL L + +L +P + + +L KV + + Q V EAL G++++ A+
Sbjct: 800 LLCDLQLCYLSVPPFH---TQQMLPQHWKVLSKAVQEASQDELVWEALGGIGISQDSAAM 856
Query: 514 N------------VTGK--------LKDEKK-ALLCRFFHACILYDVLNFDNHQKVAKMY 552
V+GK + DE+ LC + + L D A
Sbjct: 857 GYLHRRCRQANAAVSGKGRPYMPDPISDERDMERLCSRLYTALALQALIADE----ADEG 912
Query: 553 GIQNS-HLQNFLNV---TSYFASKVYRFCEELPELWCYKQLLTDLPQTLMYCRAPNLRAL 608
+Q+ L NF + S+F+ K F L W Y + + Y + +L
Sbjct: 913 QVQDQFQLDNFRELRLHCSHFSGKAAAFASRL--GWTYMAA-----RHIKYGSKLEVSSL 965
Query: 609 MDLPGVKIGRARQLLNAGYSSLELIARADAKEMVAKIRH 647
+L GV + AR L N+G +LE +A A +++V + H
Sbjct: 966 TELSGVDVATARLLFNSGLCTLEAVAEARLEDIVEALSH 1004
>gi|366990351|ref|XP_003674943.1| hypothetical protein NCAS_0B04870 [Naumovozyma castellii CBS 4309]
gi|342300807|emb|CCC68571.1| hypothetical protein NCAS_0B04870 [Naumovozyma castellii CBS 4309]
Length = 1983
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 114/389 (29%), Positives = 189/389 (48%), Gaps = 40/389 (10%)
Query: 23 YAGVK-----GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHML 77
Y G+K G T++Q+N+ I + T EK + + I + LI+IDE H+L
Sbjct: 412 YLGIKVAELTGDSRLTRQQINETHILVSTPEKWDVVTRKSEDTSFIQFVRLIIIDEIHLL 471
Query: 78 NEPQRGPILECVVSKVLY---LKKSIQIFAMSATIGNINALSTFI----EGITYVENS-R 129
++ +RGP++E +V++ L+ L+ S +I +SAT+ N + F+ EGI Y + S R
Sbjct: 472 HD-ERGPVIEAIVARTLWSNHLQTSPRIIGISATLPNYRDVGRFLRAPKEGIFYFDASFR 530
Query: 130 PTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSK 189
P + Q F G +TE + ++ + D VL V V++F S+
Sbjct: 531 PCP----------LTQQFCG--ITEQNSLKRLSAMNEACYDKVLETVSEGHQVIVFVHSR 578
Query: 190 IACSNLALRLQFDRFPGTKEYKKQEKEDL--IEALKEENDGKLSTNLEECILYGVAYHHA 247
+ A L+ DR T K K D E LK E++ NL++ + G++ HHA
Sbjct: 579 KETARTATWLK-DRLHETDNIDKLRKSDAGSKEILKTESENIQDPNLKKLLTSGISIHHA 637
Query: 248 DLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYV------GRDFISLN 301
L+ +R L E+ + G +Q++ T+TLA GVNLPA VII+ + + +S
Sbjct: 638 GLSRNDRSLSEDLFADGLIQVLVSTATLAWGVNLPAHTVIIKGTEIYSPEKGTWQQLSPQ 697
Query: 302 MYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEV 361
QM+GRAGR GE +++ D + +++N PI S + +L EV
Sbjct: 698 DILQMLGRAGRPRYDTHGEGVIIT-NQTDVQYYLAVLNQQL-PIESQFVSRLVDNLNAEV 755
Query: 362 VAANLCSSLEDVKTLIKHTLFY--QLKSP 388
V+ ++ + + T + +T Y L+SP
Sbjct: 756 VSGSV-RDIHNAVTWLSYTYLYIRMLESP 783
>gi|284039711|ref|YP_003389641.1| DEAD/DEAH box helicase [Spirosoma linguale DSM 74]
gi|283819004|gb|ADB40842.1| DEAD/DEAH box helicase domain protein [Spirosoma linguale DSM 74]
Length = 1004
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 102/400 (25%), Positives = 183/400 (45%), Gaps = 31/400 (7%)
Query: 60 ENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKK---SIQIFAMSATIGNINALS 116
+ ++ IG++VIDE + EP RG I+E +++ +L ++ S Q+ A+SA IG+ N
Sbjct: 398 QGTLNRIGVVVIDEAQFITEPNRGIIVELLLTYLLASRERGISPQVVALSAVIGDTNGFE 457
Query: 117 TFIEGITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLT------GSGPD 170
+++ + RP E V +F+ D +LT L D
Sbjct: 458 HWLKCNALISTRRPVPLEEGVIDRSGIFEYIDPDTLTVQTRQLLPQGAVVQRRKEAGAQD 517
Query: 171 AVLHLVQGNLMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQE-----KEDLIEALKEE 225
++ L + ++ + R + G Y ++ D++ L
Sbjct: 518 VIVPLAN------VLLKQQVGAKLIVFRNMRGKAEGVAGYLAKDLNLPPAHDVLALLPSN 571
Query: 226 NDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLA--GTLQIICCTSTLAAGVNLPA 283
+ K S L +C+L G A+H+++L+ ER +E ++ G++ ++ TSTLAAG+N PA
Sbjct: 572 DLSKTSARLHDCLLGGTAFHNSNLSREEREAVERSFRIKNGSVHVLGATSTLAAGINTPA 631
Query: 284 QRVIIRDS-YVGRDF--ISLNMYKQMVGRAGRTGLQESGESIMLCK-TMQDFLRFSSMMN 339
VI+ ++ +VG D ++ YK MVGRAGR G E G+S ++ T++ F +
Sbjct: 632 SAVILGETEFVGEDGRPFTIAEYKNMVGRAGRLGYNERGQSFIIANTTLERRHLFQKYVL 691
Query: 340 AGPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTL--FYQLKSPEDQQTFLET 397
PEP+ S L +L ++A DV +L+ +T + ++ D + E
Sbjct: 692 GRPEPLRSSFSNSHLATWVLRLLAQIPRLLRNDVSSLLANTYGGYLAGRADPDWRQRTEV 751
Query: 398 TLSEIVASLLASKGTMLTMNEAGHLSLTSIAKAAVQAGLS 437
+ I+ L+ L E H+ LT + A+ + L+
Sbjct: 752 HVERIMVDLIQYG---LVEQEDKHVQLTLLGFASANSSLA 788
>gi|410721217|ref|ZP_11360560.1| superfamily II helicase [Methanobacterium sp. Maddingley MBC34]
gi|410599492|gb|EKQ54041.1| superfamily II helicase [Methanobacterium sp. Maddingley MBC34]
Length = 693
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 101/357 (28%), Positives = 172/357 (48%), Gaps = 38/357 (10%)
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIE 120
N + E+ L+++DEFHM+ E RGP +EC +++ L +++ A+SAT+ N+ LST++
Sbjct: 124 NTLSEVDLLIVDEFHMIGEYSRGPTIECAITRSRLLNPGMRLIALSATLQNMEELSTWLG 183
Query: 121 GITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNL 180
+ RP V + K V TE Y T + D +L +++ ++
Sbjct: 184 ARVVEHDYRP------VPLFKEVLN-------TEEYG-------TKNKNDVILRILKDSM 223
Query: 181 ----MVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKE--ENDGKLST-- 232
L+F S++ +LA L KK++ + + E + + G L T
Sbjct: 224 DESSQALVFVSTRRFTESLANYLAGKIKKSLPADKKKDFKRVAEKILDVPRRRGSLPTEV 283
Query: 233 --NLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRD 290
L EC G+A+HHA L ++ +IEE + AG L +I T +L GVNLP++ V+IRD
Sbjct: 284 CLKLAECAENGMAFHHAGLFDRQKEIIEEEFRAGNLLMITATPSLMYGVNLPSKNVVIRD 343
Query: 291 ----SYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGP-EPI 345
+ G I + Y QM GRAGR G + G S ++ KT+ + + G E
Sbjct: 344 YTRWTSQGPQPIPVFDYLQMSGRAGRPGYDKEGYSYLIGKTLSEAEQLQYQYIYGEIEAT 403
Query: 346 SSHM--DPPTLVDLILEVVAANLCSSLEDVKTLIKHTLF-YQLKSPEDQQTFLETTL 399
+S + + + I+ VAA + +L++++ + T +Q+ E F T+
Sbjct: 404 NSKLLENRDAVYRQIISQVAAGMAKNLDELEEFFQSTFSGFQMSHSEYTSLFASDTI 460
>gi|157127858|ref|XP_001661214.1| ATP-dependent DNA helicase mer3 [Aedes aegypti]
gi|108872776|gb|EAT37001.1| AAEL010958-PA [Aedes aegypti]
Length = 1199
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 107/371 (28%), Positives = 180/371 (48%), Gaps = 52/371 (14%)
Query: 41 SIYICTIEKGSKLIGSLIQE-NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKS 99
++ + T EK + + Q N + I L++IDE H+LN+ RGP+LE VVS++ + +
Sbjct: 151 NLILTTPEKWNSITRRWRQNVNFVRMIRLVMIDEVHILNDQFRGPVLEAVVSRMRSIHRF 210
Query: 100 IQ-------------IFAMSATIGNINALSTFI-EGITYV-----ENSRPTKHSEYVTVD 140
++ I A+SAT N+ L+ ++ E T E+ RP K +D
Sbjct: 211 VEGDGGESAVVDPMRIIALSATAPNVADLAAWVGEANTTCFYNISESRRPIK------ID 264
Query: 141 KRVFQSFDGKSLTEIYAD-NLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRL 199
K V + S + D NL+Y L V+ L+FCS++ A + + L
Sbjct: 265 KHVLGYYCDPSTSPFRFDMNLNYKLF-----EVICKYSSGRPSLVFCSTRKATESASKHL 319
Query: 200 QFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEE 259
+++ + D + AL+ + + +L+ +L GV YHHA L+ +R+LIE+
Sbjct: 320 -------VEQHSLRLTPDQVSALQIVANQLQNGDLKRRLLAGVGYHHAGLSIADRQLIED 372
Query: 260 AYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGRDFISLNMYK-----QMVGRAGRTG 314
A+ AG + ++CCTS LA GVNLPA VII+ + + D+ + Y QM+GRAGR
Sbjct: 373 AFRAGRIPVLCCTSGLAMGVNLPAHLVIIKSTQMYTDY-GMEEYPESSIFQMIGRAGRPQ 431
Query: 315 LQESGESIMLCK--TMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAANLCSSLED 372
G ++++ + +Q + R ++ G PI S++ L E+V + + L
Sbjct: 432 FDTFGVAVIMTQRENVQKYERLAT----GSVPIESYLHEHLAEHLNSEIVLQTI-TDLAS 486
Query: 373 VKTLIKHTLFY 383
I+ T Y
Sbjct: 487 AMDWIRSTFLY 497
>gi|154337992|ref|XP_001565222.1| putative DNA polymerase theta (helicase domain only) [Leishmania
braziliensis MHOM/BR/75/M2904]
gi|134062269|emb|CAM36657.1| putative DNA polymerase theta (helicase domain only) [Leishmania
braziliensis MHOM/BR/75/M2904]
Length = 2239
Score = 123 bits (309), Expect = 3e-25, Method: Composition-based stats.
Identities = 66/138 (47%), Positives = 88/138 (63%), Gaps = 3/138 (2%)
Query: 231 STNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRD 290
++ L E I +GVA+HH L A ER LIE A+ ++I+CCTSTLAAGVNLPA+RVII+
Sbjct: 1612 ASQLSEVIPFGVAFHHGGLLAEERDLIETAFRRNHIRILCCTSTLAAGVNLPARRVIIKT 1671
Query: 291 SYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHM- 349
YVGR+F++ + Y QM GRAGR G GES +L + +D R ++M+A EP S +
Sbjct: 1672 PYVGREFLTKSRYLQMCGRAGRAGSNTYGESFLLLSS-RDQARGHALMHACVEPCCSQLL 1730
Query: 350 -DPPTLVDLILEVVAANL 366
D T +LE V L
Sbjct: 1731 EDNQTFTRSLLECVGVGL 1748
Score = 79.3 bits (194), Expect = 6e-12, Method: Composition-based stats.
Identities = 61/206 (29%), Positives = 101/206 (49%), Gaps = 14/206 (6%)
Query: 457 LLNSLHMLFLVIPLEYRIPSDGILLSRSKVYDRYTKFHPQTLRVAEALGVTENLV---AL 513
L + LH+ + + PL D LL ++ R+A LGV V A+
Sbjct: 1990 LSDDLHLCYFLTPLREVGKCDWELLRL-----MMSRMSDSRQRIASLLGVDAFFVDQQAM 2044
Query: 514 NVTGKLK--DEKKALLC---RFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSY 568
+ G L+ DE + L RF+ A +L DVL V + Y + LQN + S
Sbjct: 2045 GLGGPLEATDEGRRRLFTAKRFYVALMLADVLAEVPMATVEQRYDVSRGQLQNLMRSASM 2104
Query: 569 FASKVYRFCEELPELWCYKQLLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYS 628
F+S + FC + E + + +L+ + L + P+L LM++ G++ RAR L NAG+
Sbjct: 2105 FSSSITSFCHAM-EWFSLEAVLSSFVKRLGFGVKPDLLPLMEVRGMQPPRARALWNAGFK 2163
Query: 629 SLELIARADAKEMVAKIRHLPLRSAR 654
L IA ADA++MV+K++ + + ++
Sbjct: 2164 RLATIAAADAEDMVSKVKAMNPKDSK 2189
Score = 77.8 bits (190), Expect = 2e-11, Method: Composition-based stats.
Identities = 36/96 (37%), Positives = 58/96 (60%), Gaps = 4/96 (4%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+ EK +L F F ++ + G G++P + +IY+CTIEK + L+ +++E
Sbjct: 1292 LAEEKTMALQPLTAAFDFNVDGHYGSSGRFPLCQ----APAIYVCTIEKANSLLNHMLEE 1347
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYL 96
R +EIG +V+DE HM+ EP+RG LE +SKVL +
Sbjct: 1348 GRTEEIGAVVVDELHMVGEPRRGGTLELFLSKVLVI 1383
>gi|448613201|ref|ZP_21663081.1| ATP-dependent DNA helicase [Haloferax mucosum ATCC BAA-1512]
gi|445740098|gb|ELZ91604.1| ATP-dependent DNA helicase [Haloferax mucosum ATCC BAA-1512]
Length = 639
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 120/442 (27%), Positives = 190/442 (42%), Gaps = 53/442 (11%)
Query: 10 AKAAEEFKFYLEEYAGVK-----GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE--NR 62
A A E+++ + +E GV G + + L I + T EK + S I+ +
Sbjct: 75 ALAREKYETF-DELPGVSVGISTGDFDAAEDDLGDHDIVVATSEK----VDSAIRNGASW 129
Query: 63 IDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGI 122
++ + +V+DE H+L RGP LE ++ + +Q+ A+SAT+ N ++ +++
Sbjct: 130 VERLACVVVDEVHLLGALGRGPTLEVTLATLQRRVPDLQLVALSATVDNPEEIAAWLDAE 189
Query: 123 TYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPD----------AV 172
RP V D+ V FD S L ++ +GP+ V
Sbjct: 190 LVESTWRPVSLRTGVYADESV--EFDDDS-------TLGVAVPPTGPNDDEATEAAVALV 240
Query: 173 LHLVQGNLMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLST 232
V+ L F S+ LA RL + DL + L E
Sbjct: 241 ADAVENGGQCLAFVRSRREAEALADRLADEDL--------SPAPDLGDELAELGGTTTGR 292
Query: 233 NLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS- 291
L EC GV +HHA L + R +E A+ L +IC T TLAAGVN+PA+RV+IRD
Sbjct: 293 QLAECARTGVGFHHAGLRSTHRVAVENAFRDRKLSVICATPTLAAGVNVPARRVVIRDQK 352
Query: 292 -YVGRD--FISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSH 348
Y G +I + QM GRAGR L GE++++ + A E + S
Sbjct: 353 RYTGESMAWIPVLDVHQMCGRAGRPHLDPFGEAVLVGDGDTKAELVERYVTADAEAVDSQ 412
Query: 349 M-DPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQLKSPEDQQTFLETTLSEIVASLL 407
D L +L VVA+ L+ V + T +Y ++P + L+E+V ++
Sbjct: 413 FADEEALRTHVLSVVASGFADCLDGVADVFSAT-YYAHQNP-------DVDLAELVGDVV 464
Query: 408 ASKGTM-LTMNEAGHLSLTSIA 428
A +M L + LS T++
Sbjct: 465 ADLESMELLAVDGDSLSATTLG 486
>gi|443897710|dbj|GAC75049.1| mismatch repair ATPase MSH6 [Pseudozyma antarctica T-34]
Length = 2956
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 97/330 (29%), Positives = 163/330 (49%), Gaps = 58/330 (17%)
Query: 39 KKSIYICTIEKGSKLIGSLIQENRI-DEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLK 97
K + I T EK L +++ I + L++IDE H+LNEPQRG LE V++++ Y
Sbjct: 236 KSRLIITTPEKWDSLTRKWDEQSGILSTVRLVLIDEVHILNEPQRGSRLEVVITRIKYKS 295
Query: 98 KSIQIFAMSATIGNINALSTFI-------------------EGITYVENSRPTKHSEYV- 137
+ A+SAT+ N+ ++ +I E + + E RP + ++V
Sbjct: 296 SQARFVAVSATVPNLEDIAAWIGSNVRHGRASASIAETAPAEILRFGEAYRPCQLDKHVY 355
Query: 138 ----TVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACS 193
D+ FQS+ LT++ + G+G L+FC+++ +
Sbjct: 356 GYPKAKDEFAFQSYLNHKLTDLIQTH------GAG-----------RPCLVFCATRRSTV 398
Query: 194 NLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYG-----VAYHHAD 248
A + G++++ D A+ + + N ++ L VA+HHA
Sbjct: 399 QAAKAVA----EGSRQFGTGPV-DAARAITGDPSEHEAGNFDDQDLQTFWSSRVAFHHAG 453
Query: 249 LTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS--YVGR--DFISLNMYK 304
L+ +RR +E A+LAG + I+CCT+TLA G+NLPA VIIR + Y G+ + L++
Sbjct: 454 LSQNDRRKVERAFLAGQVHILCCTTTLATGINLPAYCVIIRGTKHYDGQWSEMSELDII- 512
Query: 305 QMVGRAGRTGLQESGESIMLCK-TMQDFLR 333
QM+GRAGR SG ++++C+ TMQ+ R
Sbjct: 513 QMMGRAGRPQFDRSGVAVIMCEDTMQNHYR 542
>gi|333986942|ref|YP_004519549.1| DEAD/DEAH box helicase domain-containing protein [Methanobacterium
sp. SWAN-1]
gi|333825086|gb|AEG17748.1| DEAD/DEAH box helicase domain protein [Methanobacterium sp. SWAN-1]
Length = 690
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 84/283 (29%), Positives = 147/283 (51%), Gaps = 32/283 (11%)
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIE 120
N + EI L+++DEFHM+ E RGP +EC +++ L ++I A+SAT+ N+ LS++++
Sbjct: 122 NTLREIDLLIVDEFHMIGEYSRGPTIECAITRSRILNPGMRIIALSATLQNMPELSSWLD 181
Query: 121 GITYVENSRPTK-HSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGN 179
+ RP + + +T ++ + K+ ++ L+ S+ S
Sbjct: 182 AHVVEHDYRPVPLYKDVLTTEE-----METKNKNDVILRVLNTSIKESS----------- 225
Query: 180 LMVLIFCSSKIACSNLALRLQFD---RFPGTKEYKKQE-KEDLIEALKEENDGKLST--- 232
+L+F S++ +LA + + P K+ +E E +++ K+ G L T
Sbjct: 226 -QILVFVSTRRFTESLANYIAGKIKRKIPADKKKAFREVAEKILDVPKKR--GSLPTAVC 282
Query: 233 -NLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRD- 290
L EC+ G+A+HHA L ++ +IEE + G L +I T +L GVNLP++ V+IRD
Sbjct: 283 LKLAECVESGIAFHHAGLFDKQKEIIEEEFREGNLYMITATPSLMYGVNLPSKNVVIRDY 342
Query: 291 ---SYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQD 330
+ G I + Y+QM GRAGR G G S ++ K++ +
Sbjct: 343 TRWTSQGPQPIPVFDYEQMSGRAGRPGYDTEGYSYLIAKSVDE 385
>gi|408383089|ref|ZP_11180628.1| DEAD/DEAH box helicase domain-containing protein [Methanobacterium
formicicum DSM 3637]
gi|407814197|gb|EKF84829.1| DEAD/DEAH box helicase domain-containing protein [Methanobacterium
formicicum DSM 3637]
Length = 693
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 99/340 (29%), Positives = 165/340 (48%), Gaps = 41/340 (12%)
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIE 120
N + E+ L+++DEFHM+ E RGP +EC +++ L +++ A+SAT+ N+ LST++
Sbjct: 124 NTLSEVDLLIVDEFHMIGEYSRGPTIECAITRSRLLNPGMRLIALSATLQNMEELSTWLG 183
Query: 121 GITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNL 180
+ RP V + K V TE Y T + D +L +++ ++
Sbjct: 184 ARVVEHDYRP------VPLFKEVLN-------TEEYG-------TKNKNDVILRILKDSM 223
Query: 181 ----MVLIFCSSKIACSNLALRLQF---DRFPGTKEYK-KQEKEDLIEALKEENDGKLST 232
L+F S++ +LA L P K K+ E +++ + G L T
Sbjct: 224 DESSQALVFVSTRRFTESLANYLAGKIKKSLPADKRKDFKKVAEKILDVPRRR--GSLPT 281
Query: 233 ----NLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVII 288
L EC G+A+HHA L ++ +IEE + AG L +I T +L GVNLP++ V+I
Sbjct: 282 EVCLKLAECAEKGMAFHHAGLFDRQKEIIEEEFRAGNLLMITATPSLMYGVNLPSKNVVI 341
Query: 289 RD----SYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGP-E 343
RD + G I + Y QM GRAGR G + G S ++ KT+ + + G E
Sbjct: 342 RDYTRWTSQGPQPIPVFDYLQMSGRAGRPGYDKEGYSYLIGKTLSEAEQLQYQYIYGEIE 401
Query: 344 PISSHM--DPPTLVDLILEVVAANLCSSLEDVKTLIKHTL 381
+S + + + I+ VAA + +LE++ ++T
Sbjct: 402 ATNSKLLENRDAVYRQIISQVAAGMARNLEELMEFFQNTF 441
>gi|254583245|ref|XP_002499354.1| ZYRO0E09812p [Zygosaccharomyces rouxii]
gi|238942928|emb|CAR31099.1| ZYRO0E09812p [Zygosaccharomyces rouxii]
Length = 1091
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 106/362 (29%), Positives = 182/362 (50%), Gaps = 40/362 (11%)
Query: 36 QLNKKSIYICTIEKGSKLIGSLIQENRIDE-IGLIVIDEFHMLNEPQRGPILECVVSKVL 94
++ K +I I T EK L NR+ E + LI++DE H L E +RG LE V++++
Sbjct: 161 KVRKCNIIITTPEKWDLLTRKWKAYNRLFELVKLILVDEIHTLRE-RRGATLEVVLTRMN 219
Query: 95 YLKKSIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSE---YVTVDKRVFQ-SFDGK 150
+ +SI+I A+SATI N+ +S+++ E ++ K + V + K V+ SF K
Sbjct: 220 IMCQSIRIIAISATIPNVEDISSWLRSKDTQERAKILKFDDSYRQVPLQKIVYGYSFYNK 279
Query: 151 SLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFC---SSKIACSNLALRLQFDRFPGT 207
+ + + D S+ S D +L + N VLIFC +S ++ + ++ F PG+
Sbjct: 280 N--DFFYD----SMYNSKLDEILRMHSKNRPVLIFCPTRASTVSTAKYVVQNCFHLAPGS 333
Query: 208 KEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQ 267
++ D L EC VA+HHA L+ +R +E+ +L G ++
Sbjct: 334 DRNADEQFHD--------------QGLLECYHQNVAFHHAGLSIEDRTKVEQGFLEGKIK 379
Query: 268 IICCTSTLAAGVNLPAQRVIIRDSYV-----GRDFISLNMYKQMVGRAGRTGLQESGESI 322
I+C TSTLA GVNLPA VII+ + + +++ L++ QM+GRAGR + G +I
Sbjct: 380 ILCSTSTLAIGVNLPAYLVIIKGTRIWNTSAAQEYPQLDVL-QMIGRAGRPDFENEGCAI 438
Query: 323 MLCKTMQDFLRFSSMMNAGPEPISS-HMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTL 381
++ + + M++ SS H++ L + + ++ SS E +++T
Sbjct: 439 IMTDSKMK-QTYEKMLHGTDNLESSLHLE---LTEHLSAEISLGTISSTETAVNWLRNTF 494
Query: 382 FY 383
FY
Sbjct: 495 FY 496
>gi|156839586|ref|XP_001643482.1| hypothetical protein Kpol_489p5 [Vanderwaltozyma polyspora DSM
70294]
gi|156114095|gb|EDO15624.1| hypothetical protein Kpol_489p5 [Vanderwaltozyma polyspora DSM
70294]
Length = 1048
Score = 122 bits (307), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 111/366 (30%), Positives = 186/366 (50%), Gaps = 36/366 (9%)
Query: 30 YPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDE-IGLIVIDEFHMLNEPQRGPILEC 88
Y T + N +I I T EK L R+ E + LI++DE HML E +RG LE
Sbjct: 85 YSETDKVRNA-NIIITTPEKWDLLTRKWEDYKRLFELVKLILVDEIHMLKE-RRGSALEV 142
Query: 89 VVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVEN--SRPTKHSE---YVTVDKRV 143
V++++ Y+ + I+I A+SATI NI +S ++ +N +R K + V ++K V
Sbjct: 143 VLTRMNYMYEDIRIVAVSATIPNIEDVSEWLRSGKKFDNRAARVLKFDDSYRQVQLEKHV 202
Query: 144 FQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRLQFDR 203
+ ++ E D S+ S D +L+ VL+FC ++ + + A +
Sbjct: 203 Y-GYNMSGKNEFQKD----SVYNSKLDEILNEHGKGRPVLVFCPTRASTVSTA------K 251
Query: 204 FPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLA 263
F T+ Y + + + + ND L +C GVA+HHA L+ +RRL+EE +L
Sbjct: 252 FIATQSYARSASNS--KNIVQFNDSVLV----DCYRSGVAFHHAGLSLEDRRLVEEEFLK 305
Query: 264 GTLQIICCTSTLAAGVNLPAQRVIIRDSYVG-----RDFISLNMYKQMVGRAGRTGLQES 318
G + ++C T+TLA GVNLPA VII+ + + +++ L++ QM+GRAGR +
Sbjct: 306 GNIMVLCSTTTLAVGVNLPAYLVIIKGTRMWSASETQEYSDLDIL-QMIGRAGRPDFESE 364
Query: 319 GESIMLCK-TMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKTLI 377
G I+L +M+ ++ +++N G + S + + L E+ + S+ VK L
Sbjct: 365 GCGIILTDISMKS--KYINLVN-GTANLESSLHLDLIEHLTAEISLKTIISTKTAVKWL- 420
Query: 378 KHTLFY 383
K+T Y
Sbjct: 421 KNTFLY 426
>gi|257077037|ref|ZP_05571398.1| ski2-like helicase [Ferroplasma acidarmanus fer1]
Length = 681
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 96/326 (29%), Positives = 161/326 (49%), Gaps = 39/326 (11%)
Query: 67 GLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVE 126
GL++IDE HM+++P RGP LE V+S +LYL I + +SAT+ NI ++ ++ T V
Sbjct: 136 GLVIIDEIHMISDPSRGPRLETVISSLLYLNPEILLLGLSATVSNIQEIAEWMNAETVVS 195
Query: 127 NSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNL----MV 182
N R V ++ + F G +T+ +L G D + L++ ++
Sbjct: 196 NFRA------VPLETGII--FKGNLITDGEKKHL-------GRDDEVSLIKESIESGGQA 240
Query: 183 LIFCSSKIACSNLALRLQFDRFPGTKEYKKQE-KEDLIEALKEENDGKLSTNLEECILYG 241
L+F +S+ A + + F +++K E DL + + +G
Sbjct: 241 LVFRNSRRNAEKYAQSM-VNFFDFQNDFEKLEIPPDLFNEAQAN-----------MVAHG 288
Query: 242 VAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGRDF---- 297
V +HHA L+ +R +IE+ + G ++I+ T TLAAGVNLPA+ VIIRD D
Sbjct: 289 VMFHHAGLSNDQRTMIEKLFKQGYIKILTATPTLAAGVNLPARTVIIRDITRFSDGYSKP 348
Query: 298 ISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGP-EPISSHMDPPTLVD 356
IS +QM+GRAGR + G + + LR + G EP+ S MD +L+
Sbjct: 349 ISGIEIQQMIGRAGRPKYDKKGYGYIYAAS-PGMLRVAEGYLTGELEPVISRMDSNSLIR 407
Query: 357 L-ILEVVAANLCSSLEDVKTLIKHTL 381
+L ++++ + + L+ ++ TL
Sbjct: 408 FNVLALISSGIATDLKGIQDFYGKTL 433
>gi|158299782|ref|XP_552976.3| AGAP009060-PA [Anopheles gambiae str. PEST]
gi|157013683|gb|EAL39033.3| AGAP009060-PA [Anopheles gambiae str. PEST]
Length = 1111
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 102/341 (29%), Positives = 162/341 (47%), Gaps = 45/341 (13%)
Query: 66 IGLIVIDEFHMLNEPQRGPILECVVSKVLYLK--------------KSIQIFAMSATIGN 111
I L +IDE ++N+ RG LE V+S++ Y+ +SI+ A+SA I N
Sbjct: 171 IRLCLIDEIQIMNDSDRGANLELVISRMKYIDSRLRRVDAPGGEMLQSIRFIAVSACIPN 230
Query: 112 INALSTFI--EGITYV-----ENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSL 164
++ + ++ EG T V E +R T+ +V SF S + NL+Y L
Sbjct: 231 VDDFARWLASEGRTVVPYTFDETNRTTRIERHVL-------SFPSASNPYKFELNLNYKL 283
Query: 165 TGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKE 224
A++ + L+FC+S+ + + A +F + K+ AL E
Sbjct: 284 P-----AIIEQYSAHKPTLVFCTSRRSVESTA------KFLANRSPVKRAGPLAGSALAE 332
Query: 225 ENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQ 284
+ L+EC+ GVAYHHA L +R IE + AG L ++CCTSTL GVNLPA
Sbjct: 333 LTGNLANRTLQECVAKGVAYHHAGLLHNDRNQIEAHFRAGHLSVLCCTSTLCMGVNLPAY 392
Query: 285 RVIIRDS--YVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGP 342
V+++ + + G+++ N QMVGRAGR E G +++L T + R+ ++
Sbjct: 393 LVVVKSTCNHTGKEYTD-NYVLQMVGRAGRAEFGEDGVAVIL-TTDGNASRYQRVVTET- 449
Query: 343 EPISSHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFY 383
PI S + L +L+ +A + V I+ T FY
Sbjct: 450 APIESQLR-RKLPELLNSEIAHGIIYDQPAVMEWIRSTFFY 489
>gi|281200302|gb|EFA74523.1| DEAD/DEAH box helicase [Polysphondylium pallidum PN500]
Length = 2185
Score = 122 bits (306), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 94/318 (29%), Positives = 160/318 (50%), Gaps = 34/318 (10%)
Query: 33 TKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSK 92
T +Q+++ I + T EK + + + LI+IDE H+L++ +RGP+LEC+V++
Sbjct: 612 TNKQISETQIIVTTPEKWDIITRKSGERAYTQLVRLIIIDEIHLLHD-ERGPVLECIVAR 670
Query: 93 VLYLKKSIQ----IFAMSATIGNINALSTFI----EGITYVENS-RPTK-HSEYVTVDKR 142
L +S Q + +SAT+ N ++TF+ EG+ Y ++S RP +Y+ + R
Sbjct: 671 TLRTIESTQEMVRLVGLSATLPNYEDVATFLRVKPEGVFYFDSSYRPIPLEQQYIGISDR 730
Query: 143 VFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRLQFD 202
+ + L +I ++ G +LIF S+ + ++
Sbjct: 731 GIKQL--QLLNDITFKKVNER-------------AGTYQILIFVHSRRETAKTGRDIRDR 775
Query: 203 RFPGTKEYKKQEKEDLIEALKEENDGKL-STNLEECILYGVAYHHADLTAGERRLIEEAY 261
K +++D +E LKEE + S +L++ + YG+ HHA L+ +R L+EE +
Sbjct: 776 ALEADIIGKLLKRKDSVEILKEEAEKTAKSADLKDLLPYGIGIHHAGLSRSDRTLVEELF 835
Query: 262 LAGTLQIICCTSTLAAGVNLPAQRVIIRDSYV-----GRDFISLNMYKQMVGRAGRTGLQ 316
+Q++ T+TLA GVNLPA VII+ + V G +S QM+GRAGR
Sbjct: 836 ADNHIQVLISTATLAWGVNLPAHTVIIKGTQVYNPEKGWTELSPLDVTQMLGRAGRPPFD 895
Query: 317 ESGESIMLCKTMQDFLRF 334
GE I++ T Q+ L+F
Sbjct: 896 TEGEGIIV--TSQNELQF 911
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 88/329 (26%), Positives = 152/329 (46%), Gaps = 31/329 (9%)
Query: 37 LNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYL 96
L SI I T EK L Q I I L V+DE HM+ G ILE +VS++ ++
Sbjct: 1450 LESASIVIATAEKWDILSRRWKQRKSIQNISLFVVDELHMIGGGADGAILEIIVSRMRFI 1509
Query: 97 K----KSIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRV-FQSFDGKS 151
I+I A+S+ + N L+ +I G T ++ H + V + Q FD
Sbjct: 1510 AIQTGSPIRIVALSSPVANARDLAEWI-GAT--PSTMFNLHPDVRPVPLEIQIQGFDFPH 1566
Query: 152 LTEIYADNLDYSLTGSGPD--AVLHLVQGNLMVLIFCS--SKIACSNLALRLQFDRFPGT 207
Y L L + P AV H +G +V + S+ +L + + +
Sbjct: 1567 ----YNARL---LAMAKPTIYAVSHNRRGQSLVFVPTRKLSRSLAKDLIVHVDSEDDIDK 1619
Query: 208 KEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQ 267
K Y + +EDL + L++ S L++ + +GV ++H LTA E+R +E + +G +Q
Sbjct: 1620 KRYLRCSEEDLEKHLQKIE----SVALKQALQWGVGFYHEGLTAQEKRTVEILFKSGAIQ 1675
Query: 268 IICCTSTLAAGVNLPAQRVIIRDS--YVGRDF----ISLNMYKQMVGRAGRTGLQESGES 321
++ T ++ +++ A V+I + Y G+ +N QM+ R+G+ G + G
Sbjct: 1676 VLIATHSVCWSLDVYASLVVIMGTQLYQGKSVRYVDYPINDVLQMIARSGQQGRDDVGRC 1735
Query: 322 IMLCKTMQDFLRFSSMMNAGPEPISSHMD 350
++LC + + + M P P+ SH+D
Sbjct: 1736 LLLCHSPKK--EYYKMFLNQPLPVESHLD 1762
>gi|448537789|ref|ZP_21622658.1| DEAD/DEAH box helicase [Halorubrum hochstenium ATCC 700873]
gi|445701749|gb|ELZ53722.1| DEAD/DEAH box helicase [Halorubrum hochstenium ATCC 700873]
Length = 663
Score = 122 bits (306), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 106/384 (27%), Positives = 176/384 (45%), Gaps = 35/384 (9%)
Query: 28 GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENR--IDEIGLIVIDEFHMLNEPQRGPI 85
G + T +L + + T EK + S I+ +DE+ +V+DE H+L +RGP
Sbjct: 97 GDFDATGEELAGNDVVVATSEK----VDSAIRNGASWVDELACVVVDEVHLLGAKRRGPT 152
Query: 86 LECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQ 145
LE ++ + +Q A+SAT+ N +A++ +++ + RP + V V V
Sbjct: 153 LEVTLATLRRRNPDLQTVALSATVDNPDAIADWLDAALVESDWRPVELRTGVAVGGDV-- 210
Query: 146 SFD-GKSLTEIYA--------DNLDYSLT---GSGPDAV-------LHLVQGNLMVLIFC 186
+FD G SL+ A D+ + + GPDA V L F
Sbjct: 211 AFDDGTSLSVDVASADEAARDDDEEVGVEKNEADGPDATEVTAALVADAVADGGQCLAFV 270
Query: 187 SSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLST-NLEECILYGVAYH 245
S+ +LA RL + ++ ++ + DG L+ L +C+ GVA+H
Sbjct: 271 RSRREAVDLAERLADEGL--AEKLGIEDAAAAAADEATDVDGTLTGRQLADCLRAGVAFH 328
Query: 246 HADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRD----SYVGRDFISLN 301
HA L +G R ++E A+ + IC T TLAAGVN+PA+RV++RD G ++I
Sbjct: 329 HAGLRSGHRSVVESAFRDRDVACICATPTLAAGVNVPARRVVVRDQRRYGEAGMEWIPTL 388
Query: 302 MYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHM-DPPTLVDLILE 360
QM GRAGR GL GE++++ + PE + S + DP L +L
Sbjct: 389 EVHQMCGRAGRPGLDPHGEAVLVADADTRAAVHERYVEGEPEAVESQLADPGALRTHVLA 448
Query: 361 VVAANLCSSLEDVKTLIKHTLFYQ 384
VA ++ ++ + + T + +
Sbjct: 449 AVATGFAATETEILDVFEGTFYAR 472
>gi|336272563|ref|XP_003351038.1| hypothetical protein SMAC_04342 [Sordaria macrospora k-hell]
gi|380090805|emb|CCC04975.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 2209
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 113/412 (27%), Positives = 203/412 (49%), Gaps = 47/412 (11%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V E+ + K E F + E G + TK+Q+++ I + T EK +
Sbjct: 597 LVQEQVGNFGKRLEPFGIRVAELTGDRQL---TKQQISETQIIVTTPEKWDVITRKATDL 653
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVL----YLKKSIQIFAMSATIGNINALS 116
+ + + LI+IDE H+L++ RGP+LE +VS+ + + ++I +SAT+ N ++
Sbjct: 654 SYTNLVRLIIIDEIHLLHD-DRGPVLESIVSRTIRKTEQTGEPVRIVGLSATLPNYRDVA 712
Query: 117 TFIE-----GITYVENS-RPTK-HSEYVTVDKRVFQSFDGKSLTEIYA-DNLDYSLTGSG 168
+F+ G+ + + + RP E++ V +R K++ ++ +++ Y
Sbjct: 713 SFLRVDTNTGLFHFDGTFRPCPLRQEFIGVTER-------KAIKQLKTMNDITYQ----- 760
Query: 169 PDAVLHLVQGNLMVLIFCSSKIACSNLA--LR---LQFDRFPGTKEYKKQEKEDLIEALK 223
+ H+ Q +LIF S+ + A +R L+ D ++ +E L EA
Sbjct: 761 -KVLEHVGQNRNQMLIFVHSRKETAKTAKYIRDKALEMDTINQILKHDAGTREVLSEASN 819
Query: 224 EENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPA 283
N+ T+L++ + YG HHA ++ +R +E+ + +G +Q++ CT+TLA GVNLPA
Sbjct: 820 SVNN----TDLKDILPYGFGIHHAGMSRADRTDVEDLFASGHIQVLVCTATLAWGVNLPA 875
Query: 284 QRVIIRDSYV----GRDFISLNMYK--QMVGRAGRTGLQESGESIMLCKTMQDFLRFSSM 337
VII+ + V ++ L+ QM+GRAGR GE I++ T + + S+
Sbjct: 876 HTVIIKGTQVYSPEKGSWVELSPQDVLQMLGRAGRPQFDTYGEGIIIT-TQGEMQYYLSL 934
Query: 338 MNAGPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQ-LKSP 388
+N PI S + +L E+V N+ S E V+ L LF + L+SP
Sbjct: 935 LNQQ-LPIESQFASKLVDNLNAEIVLGNVRSRDEGVEWLGYTYLFVRMLRSP 985
Score = 41.2 bits (95), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 74/372 (19%), Positives = 149/372 (40%), Gaps = 48/372 (12%)
Query: 35 RQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVL 94
R L + + + T + L + + + L + DE H+L Q G + E +VS++
Sbjct: 1471 RLLEQGDLIMATPLQWDVLSRQWKRRKNVQTVELFIADELHLLGG-QMGYVYEIIVSRMH 1529
Query: 95 YLKKS----IQIFAMSATIGNINALSTFIEGITY-VENSRPTKHSEYVTVDKRVFQSFD- 148
Y++ ++I +S ++ N + +I+ + + N P H + ++ + QS+
Sbjct: 1530 YIRTQTELPLRIVGLSVSLANARDVGEWIDAKKHDIYNFSP--HVRPIPLELHI-QSYTI 1586
Query: 149 --GKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRL------- 199
SL A ++T PD LIF S+ A +
Sbjct: 1587 PHFPSLMLAMAKPTYLAVTQLSPDQP---------ALIFVPSRKQTRATARDILTACLAD 1637
Query: 200 -QFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIE 258
DRF + +E +++ D L E + +GV Y+H L+ ++R+++
Sbjct: 1638 DDEDRFLHVE----------VEQIQKLLDRVQEAALAEALKHGVGYYHEALSLNDKRIVK 1687
Query: 259 EAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS--YVGRDF----ISLNMYKQMVGRAGR 312
Y G +Q++ + + ++ A VI+ + + GR+ L+ QM G+A
Sbjct: 1688 HLYNNGAIQVLIASRDVCWELDCSAHLVIVMGTQYFEGREHRYVDYPLSEVLQMFGKALL 1747
Query: 313 TGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAANLCSSLED 372
G +++ ++ + +N P+ SH+ L D + ++ + S ED
Sbjct: 1748 QNKAGRGCGVLMVPAVKREY-YKKFLNEA-LPVESHLH-NFLHDAFVTEISTKMIESGED 1804
Query: 373 VKTLIKHTLFYQ 384
T FY+
Sbjct: 1805 AINWATFTYFYR 1816
>gi|85118504|ref|XP_965458.1| hypothetical protein NCU02685 [Neurospora crassa OR74A]
gi|28927267|gb|EAA36222.1| hypothetical protein NCU02685 [Neurospora crassa OR74A]
Length = 2209
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 112/412 (27%), Positives = 202/412 (49%), Gaps = 47/412 (11%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V E+ + K E F + E G + TK+Q+++ I + T EK +
Sbjct: 597 LVQEQVGNFGKRLEPFGIRVAELTGDRQL---TKQQISETQIIVTTPEKWDVITRKATDL 653
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVL----YLKKSIQIFAMSATIGNINALS 116
+ + + LI+IDE H+L++ RGP+LE +V++ + + ++I +SAT+ N ++
Sbjct: 654 SYTNLVRLIIIDEIHLLHD-DRGPVLESIVARTIRKTEQTGEPVRIVGLSATLPNYRDVA 712
Query: 117 TFIE-----GITYVENS-RPTK-HSEYVTV-DKRVFQSFDGKSLTEIYADNLDYSLTGSG 168
+F+ G+ + + + RP E++ V D++ + K++ +I +
Sbjct: 713 SFLRVDTNTGLFHFDGTFRPCPLRQEFIGVTDRKAIKQL--KTMNDITYQKV-------- 762
Query: 169 PDAVLHLVQGNLMVLIFCSSKIACSNLA--LR---LQFDRFPGTKEYKKQEKEDLIEALK 223
+ H+ Q +LIF S+ + A +R L+ D ++ +E L EA
Sbjct: 763 ---LEHVGQNRNQMLIFVHSRKETAKTARYIRDKALEMDTINQILKHDAGTREVLSEASN 819
Query: 224 EENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPA 283
N+ T+L++ + YG HHA ++ +R +E+ + +G +Q++ CT+TLA GVNLPA
Sbjct: 820 SVNN----TDLKDILPYGFGIHHAGMSRADRTDVEDLFASGHIQVLVCTATLAWGVNLPA 875
Query: 284 QRVIIRDSYV----GRDFISLNMYK--QMVGRAGRTGLQESGESIMLCKTMQDFLRFSSM 337
VII+ + V ++ L+ QM+GRAGR GE I++ T + + S+
Sbjct: 876 HTVIIKGTQVYSPEKGSWVELSPQDVLQMLGRAGRPQFDTYGEGIIIT-TQGEMQYYLSL 934
Query: 338 MNAGPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQ-LKSP 388
+N PI S + +L E+V N+ S E V+ L LF + L+SP
Sbjct: 935 LNQQ-LPIESQFASKLVDNLNAEIVLGNVRSRDEGVEWLGYTYLFVRMLRSP 985
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 73/372 (19%), Positives = 149/372 (40%), Gaps = 48/372 (12%)
Query: 35 RQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVL 94
R L + + + T + L + + + L + DE H+L Q G + E +VS++
Sbjct: 1471 RLLEQGDLIMATPLQWDVLSRQWKRRKNVQTVELFIADELHLLGG-QMGYVYEIIVSRMH 1529
Query: 95 YLKKS----IQIFAMSATIGNINALSTFIEGITY-VENSRPTKHSEYVTVDKRVFQSFD- 148
Y++ ++I +S ++ N + +I+ + + N P H + ++ + QS+
Sbjct: 1530 YIRTQTELPLRIVGLSVSLANARDVGEWIDAKKHDIYNFSP--HVRPIPLELHI-QSYSI 1586
Query: 149 --GKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRL------- 199
SL A ++T PD LIF S+ A +
Sbjct: 1587 PHFPSLMLAMAKPTYLAVTQLSPDQ---------SALIFVPSRKQTRATARDILTACLAD 1637
Query: 200 -QFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIE 258
DRF +E +++ D L E + +GV Y+H L+ ++R+++
Sbjct: 1638 DDEDRFLHVD----------VEQIQKLLDRVQEAALAEALKHGVGYYHEALSLNDKRIVK 1687
Query: 259 EAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS--YVGRDF----ISLNMYKQMVGRAGR 312
Y G +Q++ + + ++ A V++ + + GR+ L+ QM G+A +
Sbjct: 1688 HLYNNGAIQVLIASRDVCWELDCTAHLVVVMGTQYFEGREHRYVDYPLSEVLQMFGKALQ 1747
Query: 313 TGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAANLCSSLED 372
G +++ ++ + +N P+ SH+ L D + ++ + S ED
Sbjct: 1748 QNKAGRGCGVLMVPAVKREY-YKKFLNEA-LPVESHLH-NFLHDAFVTEISTKMIESGED 1804
Query: 373 VKTLIKHTLFYQ 384
T FY+
Sbjct: 1805 AINWATFTYFYR 1816
>gi|170045983|ref|XP_001850567.1| ATP-dependent DNA helicase MER3 [Culex quinquefasciatus]
gi|167868925|gb|EDS32308.1| ATP-dependent DNA helicase MER3 [Culex quinquefasciatus]
Length = 486
Score = 122 bits (305), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 91/293 (31%), Positives = 145/293 (49%), Gaps = 60/293 (20%)
Query: 66 IGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSI-----------QIFAMSATIGNINA 114
I L++IDE H+LN+P RGP+LE VVS++ + + I +I A+SAT N+
Sbjct: 177 IKLVMIDEVHILNDPNRGPVLEAVVSRMRNIHRFIGGESEGGMEPMRIIALSATAPNVAD 236
Query: 115 LSTFI-EGIT-----YVENSRPTKHSEYVTVDKRVFQSF--DGKSLTEIYADNLDYSLTG 166
L+ ++ G T E+ RP K +YV Q + D + + + NL+Y L
Sbjct: 237 LAAWVGHGNTTCFYNIAESRRPIKIDKYV-------QGYYCDTNTSSFRFDLNLNYKLFD 289
Query: 167 SGPDAVLHLVQGNLMVLIFCSSKIA--------CSNLALRLQFDRFPGTKEYKKQEKEDL 218
++ GN L+FCS++ A +N LRL DR
Sbjct: 290 -----IIVKYSGNRPTLVFCSTRKATETAINHLVNNHPLRLTPDR--------------- 329
Query: 219 IEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAG 278
AL E + + L+ C+ G ++HA ++ +R L+EE++ AG + ++CCTS LA G
Sbjct: 330 NNALMEIAEKVQNVELKRCLPTGYVFYHAGMSFADRSLVEESFRAGNIPVMCCTSALAMG 389
Query: 279 VNLPAQRVIIRDSYVGRDFISLNMYK-----QMVGRAGRTGLQESGESIMLCK 326
VNLPA VII+ + + D+ + Y QM+GRAGR G ++++ +
Sbjct: 390 VNLPAHLVIIKSTQMYTDY-GMEEYPESSIFQMIGRAGRPQFDTFGVAVIMTQ 441
>gi|195590593|ref|XP_002085029.1| GD12527 [Drosophila simulans]
gi|194197038|gb|EDX10614.1| GD12527 [Drosophila simulans]
Length = 1805
Score = 122 bits (305), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 121/466 (25%), Positives = 217/466 (46%), Gaps = 65/466 (13%)
Query: 28 GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILE 87
G + T+ Q+ I +CT EK + + + + L++IDE H+L++ +RGP+LE
Sbjct: 571 GDHQLTREQIAATQIIVCTPEKWDIITRKGGERTFVSLVRLVIIDEIHLLHD-ERGPVLE 629
Query: 88 CVVSKVLY----LKKSIQIFAMSATIGNINALSTFI-----EGITYVENS-RPTK-HSEY 136
+V++ + ++ +++ +SAT+ N ++TF+ +G+ Y +NS RP +Y
Sbjct: 630 ALVARTIRNIETTQEEVRLVGLSATLPNYQDVATFLRVKPDKGLFYFDNSYRPVSLEQQY 689
Query: 137 VTV-DKRVFQSFDGKSLTEI-YADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSN 194
+ V +K+ + F + + EI Y ++++ G VL+F S+
Sbjct: 690 IGVTEKKALKRF--QVMNEIVYEKTMEHA--------------GRNQVLVFVHSRKETGK 733
Query: 195 LA-----LRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADL 249
A + L+ D +E +E L+ E + +T L+E + YG A HHA +
Sbjct: 734 TARAVRDMCLEQDTLGSFL----KEGSASMEVLRTEAEQVKNTELKELLPYGFAIHHAGM 789
Query: 250 TAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYV-----GRDFISLNMYK 304
T +R L+E+ + +Q++ T+TLA GVNLPA VII+ + V GR ++ L+
Sbjct: 790 TRVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQVYNPEKGR-WVELSALD 848
Query: 305 --QMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVV 362
QM+GRAGR GE I++ T L+F + PI S L D++ +
Sbjct: 849 VLQMLGRAGRPQYDTKGEGILI--TNHSELQFYLSLLNQQLPIESQF-ISKLPDMLNAEI 905
Query: 363 AANLCSSLEDVKTLIKHTLFY--QLKSPE---------DQQTFLETTLSEIV---ASLLA 408
L+D + +T Y L++P LE ++++ A L
Sbjct: 906 VLGTVQHLQDAVNWLGYTYLYIRMLRNPTLYGVSHDAIKADPLLEQHRADLLHTAACCLE 965
Query: 409 SKGTMLTMNEAGHLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLN 454
G + + GH +T + + A L+H+ ++ Y+ LL L+
Sbjct: 966 RSGLIKYDRKTGHFQVTDLGRIASHYYLTHE-TMLTYNQLLKQTLS 1010
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 84/338 (24%), Positives = 153/338 (45%), Gaps = 55/338 (16%)
Query: 39 KKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYL-- 96
K + I T +K L Q + + L ++DE ++ + GP+LE V S++ Y+
Sbjct: 1420 KGQLVITTADKWDVLSRRWKQRKNVQLVNLFIVDELQLVG-GEEGPVLEIVCSRMRYISS 1478
Query: 97 --KKSIQIFAMSATIGNINALSTFI-----EGITYVENSRPTKHSEYVTVDKRVFQSFDG 149
+K I+I A+SA++ + ++ ++ + + RP ++ +
Sbjct: 1479 QIEKQIRIVALSASLTDARDVAQWLGCNPNATFNFHPSVRPIPLELHIQGYNVTHNATRI 1538
Query: 150 KSLTE-IYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALR--------LQ 200
++++ +Y L YS + V++F SS+ A+ LQ
Sbjct: 1539 ATMSKPVYYAILKYS--------------AHKPVIVFVSSRKQARLTAIDVLTYAASDLQ 1584
Query: 201 FDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEA 260
+RF E+ED+ L+ D L+E + GVAY H L+A + RL+E+
Sbjct: 1585 PNRF------FHAEEEDIKPFLERMTD----KTLKETLAQGVAYLHEGLSASDHRLVEQL 1634
Query: 261 YLAGTLQIICCTSTLAAGVNLPAQRVIIRDS--YVGRDFISLNMYK-----QMVGRAGRT 313
+ +G +Q+ + L G+++ A VII D+ Y G++ S Y QM+GRA R
Sbjct: 1635 FDSGAVQVAVVSRDLCWGMSISAHLVIIMDTQFYNGKNH-SYEDYPITDVLQMIGRANRP 1693
Query: 314 GLQESGESIMLCK-TMQDFLRFSSMMNAGPEPISSHMD 350
+ +++C+ + +DF F +N P PI SH+D
Sbjct: 1694 NEDADAKCVLMCQSSKKDF--FKKFINE-PLPIESHLD 1728
>gi|38567201|emb|CAE76494.1| related to ATP dependent RNA helicase [Neurospora crassa]
Length = 2195
Score = 122 bits (305), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 112/412 (27%), Positives = 202/412 (49%), Gaps = 47/412 (11%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V E+ + K E F + E G + TK+Q+++ I + T EK +
Sbjct: 597 LVQEQVGNFGKRLEPFGIRVAELTGDRQL---TKQQISETQIIVTTPEKWDVITRKATDL 653
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVL----YLKKSIQIFAMSATIGNINALS 116
+ + + LI+IDE H+L++ RGP+LE +V++ + + ++I +SAT+ N ++
Sbjct: 654 SYTNLVRLIIIDEIHLLHD-DRGPVLESIVARTIRKTEQTGEPVRIVGLSATLPNYRDVA 712
Query: 117 TFIE-----GITYVENS-RPTK-HSEYVTV-DKRVFQSFDGKSLTEIYADNLDYSLTGSG 168
+F+ G+ + + + RP E++ V D++ + K++ +I +
Sbjct: 713 SFLRVDTNTGLFHFDGTFRPCPLRQEFIGVTDRKAIKQL--KTMNDITYQKV-------- 762
Query: 169 PDAVLHLVQGNLMVLIFCSSKIACSNLA--LR---LQFDRFPGTKEYKKQEKEDLIEALK 223
+ H+ Q +LIF S+ + A +R L+ D ++ +E L EA
Sbjct: 763 ---LEHVGQNRNQMLIFVHSRKETAKTARYIRDKALEMDTINQILKHDAGTREVLSEASN 819
Query: 224 EENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPA 283
N+ T+L++ + YG HHA ++ +R +E+ + +G +Q++ CT+TLA GVNLPA
Sbjct: 820 SVNN----TDLKDILPYGFGIHHAGMSRADRTDVEDLFASGHIQVLVCTATLAWGVNLPA 875
Query: 284 QRVIIRDSYV----GRDFISLNMYK--QMVGRAGRTGLQESGESIMLCKTMQDFLRFSSM 337
VII+ + V ++ L+ QM+GRAGR GE I++ T + + S+
Sbjct: 876 HTVIIKGTQVYSPEKGSWVELSPQDVLQMLGRAGRPQFDTYGEGIIIT-TQGEMQYYLSL 934
Query: 338 MNAGPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQ-LKSP 388
+N PI S + +L E+V N+ S E V+ L LF + L+SP
Sbjct: 935 LNQQ-LPIESQFASKLVDNLNAEIVLGNVRSRDEGVEWLGYTYLFVRMLRSP 985
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 73/372 (19%), Positives = 149/372 (40%), Gaps = 48/372 (12%)
Query: 35 RQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVL 94
R L + + + T + L + + + L + DE H+L Q G + E +VS++
Sbjct: 1457 RLLEQGDLIMATPLQWDVLSRQWKRRKNVQTVELFIADELHLLGG-QMGYVYEIIVSRMH 1515
Query: 95 YLKKS----IQIFAMSATIGNINALSTFIEGITY-VENSRPTKHSEYVTVDKRVFQSFD- 148
Y++ ++I +S ++ N + +I+ + + N P H + ++ + QS+
Sbjct: 1516 YIRTQTELPLRIVGLSVSLANARDVGEWIDAKKHDIYNFSP--HVRPIPLELHI-QSYSI 1572
Query: 149 --GKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRL------- 199
SL A ++T PD LIF S+ A +
Sbjct: 1573 PHFPSLMLAMAKPTYLAVTQLSPDQ---------SALIFVPSRKQTRATARDILTACLAD 1623
Query: 200 -QFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIE 258
DRF +E +++ D L E + +GV Y+H L+ ++R+++
Sbjct: 1624 DDEDRFLHVD----------VEQIQKLLDRVQEAALAEALKHGVGYYHEALSLNDKRIVK 1673
Query: 259 EAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS--YVGRDF----ISLNMYKQMVGRAGR 312
Y G +Q++ + + ++ A V++ + + GR+ L+ QM G+A +
Sbjct: 1674 HLYNNGAIQVLIASRDVCWELDCTAHLVVVMGTQYFEGREHRYVDYPLSEVLQMFGKALQ 1733
Query: 313 TGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAANLCSSLED 372
G +++ ++ + +N P+ SH+ L D + ++ + S ED
Sbjct: 1734 QNKAGRGCGVLMVPAVKREY-YKKFLNEA-LPVESHLH-NFLHDAFVTEISTKMIESGED 1790
Query: 373 VKTLIKHTLFYQ 384
T FY+
Sbjct: 1791 AINWATFTYFYR 1802
>gi|288560937|ref|YP_003424423.1| DEAD/DEAH box helicase domain-containing protein
[Methanobrevibacter ruminantium M1]
gi|288543647|gb|ADC47531.1| DEAD/DEAH box helicase domain-containing protein
[Methanobrevibacter ruminantium M1]
Length = 690
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 96/353 (27%), Positives = 173/353 (49%), Gaps = 38/353 (10%)
Query: 65 EIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITY 124
++ I+IDEFHM+ E RGP +EC +++ + +++I A+SAT+ N++ + +++
Sbjct: 126 DVDTIIIDEFHMIGEYSRGPTIECAITRAKIINPNLRIIALSATLENMSEIENWLDATVI 185
Query: 125 VENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNL---- 180
+ RP V ++K V TE++ T + D V+ +++ +
Sbjct: 186 EHDYRP------VPLNKDVLD-------TEMFN-------TKNKNDVVVKVIEKAIEDDS 225
Query: 181 MVLIFCSSKIACSNLALRLQFD-RFPGTKEYKKQEKE---DLIEALKEENDGKLST--NL 234
L F S++ +LA + + T E KK+ KE ++E +++ ST L
Sbjct: 226 QALSFVSTRRFTESLANYVAEKLKKKTTDEQKKRFKEVADKILEVPEKKGSRPTSTCLKL 285
Query: 235 EECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRD---- 290
E G +HHA L + ++ +IEE + G + +I T +L GVNLP++ V+IRD
Sbjct: 286 AESCENGAVFHHAGLFSEQKEIIEEEFRNGNILMIAATPSLMYGVNLPSKYVVIRDYTRW 345
Query: 291 SYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGP-EPISSHM 349
+ G I + Y+QM GRAGR +G S ++ K+M++ G EP +S +
Sbjct: 346 TSQGPQAIPVFDYEQMSGRAGRPQYDNAGYSYLIAKSMEEASTLEERYIYGDIEPTNSKL 405
Query: 350 --DPPTLVDLILEVVAANLCSSLEDVKTLIKHTLF-YQLKSPEDQQTFLETTL 399
+ + I+ VA+ + + ED++ K T + YQ+ + F E +L
Sbjct: 406 IENKDAVFRQIIAQVASTISKTPEDLEDFFKKTFYGYQMTNNSSMSFFAEESL 458
>gi|258567928|ref|XP_002584708.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237906154|gb|EEP80555.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 1404
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 111/410 (27%), Positives = 187/410 (45%), Gaps = 61/410 (14%)
Query: 6 YQSLAKA--AEEFKFYLEEYAGVK-------GQYPPTK-RQLNKKSIYICTIEKGSKLIG 55
YQ+ K+ +E F+ + ++A + G T+ R + SI I T EK +
Sbjct: 238 YQAPTKSLCSERFRDWRAKFAALDLQCAELTGDTDQTQLRSVQHASIIITTPEKWDSMTR 297
Query: 56 SLIQENRIDE-IGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINA 114
R+ + I L +IDE H+L E RG LE VVS++ + +++ A+SAT+ N
Sbjct: 298 KWKDHVRLMQLIKLFLIDEVHILKE-TRGATLEAVVSRMKSVNSNVRFVALSATVPNSED 356
Query: 115 LSTFIEGIT-----------YVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYS 163
++T++ + E RP K ++V + S+ +A D
Sbjct: 357 IATWLGKDPTNQHLPAHRERFGEEFRPVKLQKFV---------YGYHSIGNDFA--FDKV 405
Query: 164 LTGSGPDAVLHLVQGNLMVLIFC---SSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIE 220
P+ + Q ++IFC +S I S +L P + + +K +++
Sbjct: 406 CDSKLPEVISKHSQ-RKPIMIFCCTRNSAITTSKNLAKLWMAANPPHRLWNSPKKSIVVQ 464
Query: 221 ALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVN 280
+ +L+ + GVA+HHA L A +R +E YL G + +ICCTSTLA GVN
Sbjct: 465 ----------NQDLQATVSAGVAFHHAGLDASDRHAVESGYLEGHISVICCTSTLAVGVN 514
Query: 281 LPAQRVIIRDSYVGRD-----FISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFS 335
LP VII+++ +D + L M QM+GRAGR S +++L T ++ + +
Sbjct: 515 LPCHLVIIKNTVSWQDNCCKEYADLEMM-QMLGRAGRPQFDNSATAVIL--TRKERVSYY 571
Query: 336 SMMNAGPEPISS--HMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFY 383
+ G EP+ S H++ LVD + + + LE + T F+
Sbjct: 572 QKLVTGSEPLESCLHLN---LVDHLNAEIGLGTVTDLESATRWLSGTFFF 618
>gi|366993373|ref|XP_003676451.1| hypothetical protein NCAS_0E00200 [Naumovozyma castellii CBS 4309]
gi|342302318|emb|CCC70090.1| hypothetical protein NCAS_0E00200 [Naumovozyma castellii CBS 4309]
Length = 1122
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 108/378 (28%), Positives = 186/378 (49%), Gaps = 62/378 (16%)
Query: 36 QLNKKSIYICTIEKGSKLIGSLIQENRIDE-IGLIVIDEFHMLNEPQRGPILECVVSKVL 94
++ K +I I T EK L +R+ E + LI++DE H L E RG LE V++++
Sbjct: 173 KVKKSNIIITTPEKWDLLTRKWTDYSRLFELVRLILVDEVHTLRE-NRGATLEVVITRMN 231
Query: 95 YLKKSIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTE 154
+ K I+I A+SATI NI+ ++T+++ S +H E +V + D
Sbjct: 232 TMCKDIRIIAVSATIPNISDVATWLK-------SHRNEHYEMA----KVLEYDDSYRQVS 280
Query: 155 IYADNLDYSLTGSGP-----------DAVLHLVQGNLMVLIFCSSKIACSNLALRLQFDR 203
+ Y+ TGS + ++ L N VLIFC ++ + + A L +R
Sbjct: 281 LKRHVCTYNFTGSNDFQRDAMYNSKLEELIQLYCQNKPVLIFCPTRASTISTAKYLVRNR 340
Query: 204 FPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLA 263
+KQ + + L EC +G+A+H+A L+ +R +E A++
Sbjct: 341 RRVPLSGQKQLADRV---------------LFECFQHGIAFHNAGLSMEDRTAVETAFIE 385
Query: 264 GTLQIICCTSTLAAGVNLPAQRVIIRDSYVGR-----DFISLNMYKQMVGRAGRTGLQES 318
GT+ I+C TSTLA G+NLPA VII+ + + ++ SL++ QM+GRAGR ++
Sbjct: 386 GTINILCSTSTLAVGINLPAYLVIIKGTRIWNSTDVDEYTSLDIL-QMIGRAGRPQFEKE 444
Query: 319 GESIMLC----KTMQDFLRFSSMMNAGPEPISS--HMDPPTLVDLILEVVAANLCSSLED 372
G ++++ K M + L + G + + S H++ L + + ++ N + ++
Sbjct: 445 GCAVIMTEPKMKNMYERLIY------GTDNLESTLHLN---LCEHLTAEISLNTVTDVDS 495
Query: 373 VKTLIKHTLFYQ--LKSP 388
T +K+T FY LKSP
Sbjct: 496 AITWLKNTFFYVRLLKSP 513
>gi|194749817|ref|XP_001957333.1| GF10367 [Drosophila ananassae]
gi|190624615|gb|EDV40139.1| GF10367 [Drosophila ananassae]
Length = 2142
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 120/466 (25%), Positives = 217/466 (46%), Gaps = 65/466 (13%)
Query: 28 GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILE 87
G + T+ Q+ + +CT EK + + + + L++IDE H+L++ +RGP+LE
Sbjct: 571 GDHQLTREQIAATQVIVCTPEKWDIITRKGGERTFVSLVRLVIIDEIHLLHD-ERGPVLE 629
Query: 88 CVVSKVLY----LKKSIQIFAMSATIGNINALSTFI-----EGITYVENS-RPTK-HSEY 136
+V++ + ++ +++ +SAT+ N ++TF+ +G+ Y +NS RP +Y
Sbjct: 630 ALVARTIRNIETTQEEVRLVGLSATLPNYQDVATFLRVKPDKGLFYFDNSYRPVSLEQQY 689
Query: 137 VTV-DKRVFQSFDGKSLTEI-YADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSN 194
+ V +K+ + F + + EI Y ++++ G VL+F S+
Sbjct: 690 IGVTEKKALKRF--QVMNEIVYEKTMEHA--------------GRNQVLVFVHSRKETGK 733
Query: 195 LA-----LRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADL 249
A + L+ D +E +E L+ E + +T L+E + YG A HHA +
Sbjct: 734 TARAVRDMCLEQDTLGSFL----REGSASMEVLRTEAEQVKNTELKELLPYGFAIHHAGM 789
Query: 250 TAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYV-----GRDFISLNMYK 304
T +R L+E+ + +Q++ T+TLA GVNLPA VII+ + V GR ++ L+
Sbjct: 790 TRVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQVYNPEKGR-WVELSALD 848
Query: 305 --QMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVV 362
QM+GRAGR GE I++ T L+F + PI S L D++ +
Sbjct: 849 VLQMLGRAGRPQYDTKGEGILI--TNHSELQFYLSLLNQQLPIESQF-ISKLPDMLNAEI 905
Query: 363 AANLCSSLEDVKTLIKHTLFY--QLKSPE---------DQQTFLETTLSEIV---ASLLA 408
L+D + +T Y L++P LE ++++ A L
Sbjct: 906 VLGTVQHLQDAVNWLGYTYLYIRMLRNPTLYGVSHDAIKADPLLEQHRADLLHTAACCLE 965
Query: 409 SKGTMLTMNEAGHLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLN 454
G + + GH +T + + A L+H+ ++ Y+ LL L+
Sbjct: 966 RSGLIKYERKTGHFQVTDLGRIASHYYLTHE-TMLTYNQLLKQTLS 1010
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 88/339 (25%), Positives = 154/339 (45%), Gaps = 57/339 (16%)
Query: 39 KKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYL-- 96
K + I T +K L Q + + L ++DE ++ + GP+LE V S++ Y+
Sbjct: 1420 KGQLVITTADKWDVLSRRWKQRKNVQLVNLFIVDELQLVG-GEEGPVLEIVCSRMRYISS 1478
Query: 97 --KKSIQIFAMSATIGNINALSTFI-----EGITYVENSRPTKHSEYVTVDKRVFQSFDG 149
+K I+I A+SA++ + ++ ++ + + RP ++ Q F+
Sbjct: 1479 QIEKQIRIVALSASLTDARDVAQWLGCNPNATFNFHPSVRPIPLELHI-------QGFN- 1530
Query: 150 KSLTEIYADNLDYSLTGSGP--DAVLHLVQGNLMVLIFCSSKIACSNLALR--------L 199
N T S P +A+L + V++F SS+ A+ L
Sbjct: 1531 ------VTHNATRIATMSKPVYNAILKY-SSHKPVIVFVSSRKQARLTAIDVLTYAASDL 1583
Query: 200 QFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEE 259
Q +RF +E ED+ L+ D L+E + GVAY H L+A + RL+E+
Sbjct: 1584 QPNRFFHAEE------EDIKPFLERMTD----KTLKETLAQGVAYLHEGLSASDHRLVEQ 1633
Query: 260 AYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS--YVGRDFISLNMYK-----QMVGRAGR 312
+ +G +Q+ + L G+++ A VII D+ Y G++ S Y QM+GRA R
Sbjct: 1634 LFDSGAVQVAVVSKDLCWGMSISAHLVIIMDTQFYNGKNH-SYEDYPITDVLQMIGRANR 1692
Query: 313 TGLQESGESIMLCK-TMQDFLRFSSMMNAGPEPISSHMD 350
+ +++C+ + +DF F +N P PI SH+D
Sbjct: 1693 PNEDADAKCVLMCQSSKKDF--FKKFINE-PLPIESHLD 1728
>gi|195377830|ref|XP_002047690.1| GJ11781 [Drosophila virilis]
gi|194154848|gb|EDW70032.1| GJ11781 [Drosophila virilis]
Length = 2142
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 120/466 (25%), Positives = 217/466 (46%), Gaps = 65/466 (13%)
Query: 28 GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILE 87
G + T+ Q+ + +CT EK + + + + L++IDE H+L++ +RGP+LE
Sbjct: 571 GDHQLTREQIAATQVIVCTPEKWDIITRKGGERTFVSLVRLVIIDEIHLLHD-ERGPVLE 629
Query: 88 CVVSKVLY----LKKSIQIFAMSATIGNINALSTFI-----EGITYVENS-RPTK-HSEY 136
+V++ + ++ +++ +SAT+ N ++TF+ +G+ Y +NS RP +Y
Sbjct: 630 ALVARTIRNIETTQEDVRLVGLSATLPNYQDVATFLRVKPDKGLFYFDNSYRPVALEQQY 689
Query: 137 VTV-DKRVFQSFDGKSLTEI-YADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSN 194
+ V +K+ + F + + EI Y ++++ G VL+F S+
Sbjct: 690 IGVTEKKALKRF--QVMNEIVYEKTMEHA--------------GRNQVLVFVHSRKETGK 733
Query: 195 LA-----LRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADL 249
A + L+ D +E +E L+ E + +T L+E + YG A HHA +
Sbjct: 734 TARAVRDMCLEQDTLGSFL----REGSASMEVLRTEAEQVKNTELKELLPYGFAIHHAGM 789
Query: 250 TAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYV-----GRDFISLNMYK 304
T +R L+E+ + +Q++ T+TLA GVNLPA VII+ + V GR ++ L+
Sbjct: 790 TRVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQVYNPEKGR-WVELSALD 848
Query: 305 --QMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVV 362
QM+GRAGR GE I++ T L+F + PI S L D++ +
Sbjct: 849 VLQMLGRAGRPQYDTKGEGILI--TNHSELQFYLSLLNQQLPIESQF-VSKLPDMLNAEI 905
Query: 363 AANLCSSLEDVKTLIKHTLFY--QLKSPE---------DQQTFLETTLSEIV---ASLLA 408
L+D + +T Y L++P LE ++++ A L
Sbjct: 906 VLGTVQHLQDAVNWLGYTYLYIRMLRNPTLYGVSHDAIKADPLLEQHRADLLHTAACCLE 965
Query: 409 SKGTMLTMNEAGHLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLN 454
G + + GH +T + + A L+H+ ++ Y+ LL L+
Sbjct: 966 RSGLIKYERKTGHFQVTDLGRIASHYYLTHE-TMLTYNQLLKQTLS 1010
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 87/339 (25%), Positives = 154/339 (45%), Gaps = 57/339 (16%)
Query: 39 KKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYL-- 96
K + I T +K L Q + +I L ++DE ++ + GP++E V S++ Y+
Sbjct: 1420 KGQLVITTADKWDVLSRRWKQRKNVQQINLFIVDELQLVG-GEEGPVMEIVCSRMRYISS 1478
Query: 97 --KKSIQIFAMSATIGNINALSTFI-----EGITYVENSRPTKHSEYVTVDKRVFQSFDG 149
+K I+I A+SA++ + ++ ++ + + RP ++ Q F+
Sbjct: 1479 QIEKQIRIVALSASLTDARDVAQWLGCNPNATFNFHPSVRPIPLELHI-------QGFN- 1530
Query: 150 KSLTEIYADNLDYSLTGSGP--DAVLHLVQGNLMVLIFCSSKIACSNLALR--------L 199
N T S P +A+L + V++F SS+ A+ L
Sbjct: 1531 ------VTHNATRIATMSKPVYNAILKY-SSHKPVIVFVSSRKQARLTAIDILTYAASDL 1583
Query: 200 QFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEE 259
Q +RF +ED I+ E K L+E + GVAY H L+A + RL+E+
Sbjct: 1584 QPNRF-------FHAEEDDIQPFLERMSDK---TLKETLAQGVAYLHEGLSASDHRLVEQ 1633
Query: 260 AYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS--YVGRDFISLNMYK-----QMVGRAGR 312
+ +G +Q+ + L G+++ + VII D+ Y G++ S Y QM+GRA R
Sbjct: 1634 LFDSGAVQVAVVSRDLCWGMSISSHLVIIMDTQFYNGKNH-SYEDYPITDVLQMIGRANR 1692
Query: 313 TGLQESGESIMLCK-TMQDFLRFSSMMNAGPEPISSHMD 350
+ +++C+ + +DF F +N P PI SH+D
Sbjct: 1693 PNEDADAKCVLMCQSSKKDF--FKKFINE-PLPIESHLD 1728
>gi|350296834|gb|EGZ77811.1| Sec63-domain-containing protein [Neurospora tetrasperma FGSC 2509]
Length = 2209
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 112/412 (27%), Positives = 202/412 (49%), Gaps = 47/412 (11%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V E+ + K E F + E G + TK+Q+++ I + T EK +
Sbjct: 597 LVQEQVGNFGKRLEPFGIRVAELTGDRQL---TKQQISETQIIVTTPEKWDVITRKATDL 653
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVL----YLKKSIQIFAMSATIGNINALS 116
+ + + LI+IDE H+L++ RGP+LE +V++ + + ++I +SAT+ N ++
Sbjct: 654 SYTNLVRLIIIDEIHLLHD-DRGPVLESIVARTIRKTEQTGEPVRIVGLSATLPNYRDVA 712
Query: 117 TFIE-----GITYVENS-RPTK-HSEYVTV-DKRVFQSFDGKSLTEIYADNLDYSLTGSG 168
+F+ G+ + + + RP E++ V D++ + K++ +I +
Sbjct: 713 SFLRVDTNTGLFHFDGTFRPCPLRQEFIGVTDRKAIKQL--KTMNDITYHKV-------- 762
Query: 169 PDAVLHLVQGNLMVLIFCSSKIACSNLA--LR---LQFDRFPGTKEYKKQEKEDLIEALK 223
+ H+ Q +LIF S+ + A +R L+ D ++ +E L EA
Sbjct: 763 ---LEHVGQNRNQMLIFVHSRKETAKTARYIRDKALEMDTINQILKHDAGTREVLSEASN 819
Query: 224 EENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPA 283
N+ T+L++ + YG HHA ++ +R +E+ + +G +Q++ CT+TLA GVNLPA
Sbjct: 820 SVNN----TDLKDILPYGFGIHHAGMSRADRTDVEDLFASGHIQVLVCTATLAWGVNLPA 875
Query: 284 QRVIIRDSYV----GRDFISLNMYK--QMVGRAGRTGLQESGESIMLCKTMQDFLRFSSM 337
VII+ + V ++ L+ QM+GRAGR GE I++ T + + S+
Sbjct: 876 HTVIIKGTQVYSPEKGSWVELSPQDVLQMLGRAGRPQFDTYGEGIIIT-TQGEMQYYLSL 934
Query: 338 MNAGPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQ-LKSP 388
+N PI S + +L E+V N+ S E V+ L LF + L+SP
Sbjct: 935 LNQQ-LPIESQFASKLVDNLNAEIVLGNVRSRDEGVEWLGYTYLFVRMLRSP 985
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 73/372 (19%), Positives = 149/372 (40%), Gaps = 48/372 (12%)
Query: 35 RQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVL 94
R L + + + T + L + + + L + DE H+L Q G + E +VS++
Sbjct: 1471 RLLEQGDLIMATPLQWDVLSRQWKRRKNVQTVELFIADELHLLGG-QMGYVYEIIVSRMH 1529
Query: 95 YLKKS----IQIFAMSATIGNINALSTFIEGITY-VENSRPTKHSEYVTVDKRVFQSFD- 148
Y++ ++I +S ++ N + +I+ + + N P H + ++ + QS+
Sbjct: 1530 YIRTQTELPLRIVGLSVSLANARDVGEWIDAKKHDIYNFSP--HVRPIPLELHI-QSYSI 1586
Query: 149 --GKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRL------- 199
SL A ++T PD LIF S+ A +
Sbjct: 1587 PHFPSLMLAMAKPTYLAVTQLSPDQP---------ALIFVPSRKQTRATARDILTACLAD 1637
Query: 200 -QFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIE 258
DRF +E +++ D L E + +GV Y+H L+ ++R+++
Sbjct: 1638 DDEDRFLHVD----------VEQIQKLLDRVQEAALAEALKHGVGYYHEALSLNDKRIVK 1687
Query: 259 EAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS--YVGRDF----ISLNMYKQMVGRAGR 312
Y G +Q++ + + ++ A V++ + + GR+ L+ QM G+A +
Sbjct: 1688 HLYNNGAIQVLIASRDVCWELDCTAHLVVVMGTQYFEGREHRYVDYPLSEVLQMFGKALQ 1747
Query: 313 TGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAANLCSSLED 372
G +++ ++ + +N P+ SH+ L D + ++ + S ED
Sbjct: 1748 QNKAGRGCGVLMVPAVKREY-YKKFLNEA-LPVESHLH-NFLHDAFVTEISTKMIESGED 1804
Query: 373 VKTLIKHTLFYQ 384
T FY+
Sbjct: 1805 AINWATFTYFYR 1816
>gi|336464733|gb|EGO52973.1| hypothetical protein NEUTE1DRAFT_126385 [Neurospora tetrasperma
FGSC 2508]
Length = 2209
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 112/412 (27%), Positives = 202/412 (49%), Gaps = 47/412 (11%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V E+ + K E F + E G + TK+Q+++ I + T EK +
Sbjct: 597 LVQEQVGNFGKRLEPFGIRVAELTGDRQL---TKQQISETQIIVTTPEKWDVITRKATDL 653
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVL----YLKKSIQIFAMSATIGNINALS 116
+ + + LI+IDE H+L++ RGP+LE +V++ + + ++I +SAT+ N ++
Sbjct: 654 SYTNLVRLIIIDEIHLLHD-DRGPVLESIVARTIRKTEQTGEPVRIVGLSATLPNYRDVA 712
Query: 117 TFIE-----GITYVENS-RPTK-HSEYVTV-DKRVFQSFDGKSLTEIYADNLDYSLTGSG 168
+F+ G+ + + + RP E++ V D++ + K++ +I +
Sbjct: 713 SFLRVDTNTGLFHFDGTFRPCPLRQEFIGVTDRKAIKQL--KTMNDITYHKV-------- 762
Query: 169 PDAVLHLVQGNLMVLIFCSSKIACSNLA--LR---LQFDRFPGTKEYKKQEKEDLIEALK 223
+ H+ Q +LIF S+ + A +R L+ D ++ +E L EA
Sbjct: 763 ---LEHVGQNRNQMLIFVHSRKETAKTARYIRDKALEMDTINQILKHDAGTREVLSEASN 819
Query: 224 EENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPA 283
N+ T+L++ + YG HHA ++ +R +E+ + +G +Q++ CT+TLA GVNLPA
Sbjct: 820 SVNN----TDLKDILPYGFGIHHAGMSRADRTDVEDLFASGHIQVLVCTATLAWGVNLPA 875
Query: 284 QRVIIRDSYV----GRDFISLNMYK--QMVGRAGRTGLQESGESIMLCKTMQDFLRFSSM 337
VII+ + V ++ L+ QM+GRAGR GE I++ T + + S+
Sbjct: 876 HTVIIKGTQVYSPEKGSWVELSPQDVLQMLGRAGRPQFDTYGEGIIIT-TQGEMQYYLSL 934
Query: 338 MNAGPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQ-LKSP 388
+N PI S + +L E+V N+ S E V+ L LF + L+SP
Sbjct: 935 LNQQ-LPIESQFASKLVDNLNAEIVLGNVRSRDEGVEWLGYTYLFVRMLRSP 985
Score = 40.8 bits (94), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 73/372 (19%), Positives = 148/372 (39%), Gaps = 48/372 (12%)
Query: 35 RQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVL 94
R L + + + T + L + + + L + DE H+L Q G + E +VS++
Sbjct: 1471 RLLEQGDLIMATPLQWDVLSRQWKRRKNVQTVELFIADELHLLGG-QMGYVYEIIVSRMH 1529
Query: 95 YLKKS----IQIFAMSATIGNINALSTFIEGITY-VENSRPTKHSEYVTVDKRVFQSFD- 148
Y++ ++I +S ++ N + +I+ + + N P H + ++ + QS+
Sbjct: 1530 YIRTQTELPLRIVGLSVSLANARDVGEWIDAKKHDIYNFSP--HVRPIPLELHI-QSYSI 1586
Query: 149 --GKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRL------- 199
SL A ++T PD LIF S+ A +
Sbjct: 1587 PHFPSLMLAMAKPTYLAVTQLSPDQP---------ALIFVPSRKQTRATARDILTACLAD 1637
Query: 200 -QFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIE 258
DRF +E +++ D L E + +GV Y+H L+ ++R+++
Sbjct: 1638 DDEDRFLHVD----------VEQIQKLLDRVQEAALAEALKHGVGYYHEALSLNDKRIVK 1687
Query: 259 EAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS--YVGRDF----ISLNMYKQMVGRAGR 312
Y G +Q++ + + ++ A V++ + + GR+ L+ QM G+A +
Sbjct: 1688 HLYNNGAIQVLIASRDVCWELDCTAHLVVVMGTQYFEGREHRYVDYPLSEVLQMFGKALQ 1747
Query: 313 TGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAANLCSSLED 372
G +++ ++ + N P+ SH+ L D + ++ + S ED
Sbjct: 1748 QNKAGRGCGVLMVPAVKREY-YKKFFNEA-LPVESHLH-NFLHDAFVTEISTKMIESGED 1804
Query: 373 VKTLIKHTLFYQ 384
T FY+
Sbjct: 1805 AINWATFTYFYR 1816
>gi|171680161|ref|XP_001905026.1| hypothetical protein [Podospora anserina S mat+]
gi|170939707|emb|CAP64933.1| unnamed protein product [Podospora anserina S mat+]
Length = 2164
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 113/411 (27%), Positives = 203/411 (49%), Gaps = 45/411 (10%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V E+ + K E + + E G + TK+Q+++ I + T EK +
Sbjct: 603 LVQEQVGNFGKRLEPYGIKVSELTGDRQL---TKQQISETQIIVTTPEKWDVITRKATDI 659
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVL----YLKKSIQIFAMSATIGNINALS 116
+ + + LI+IDE H+L++ RGP+LE +VS+ + + ++I +SAT+ N ++
Sbjct: 660 SYTNLVRLIIIDEIHLLHD-DRGPVLESIVSRTIRKTEQTGEPVRIVGLSATLPNYKDVA 718
Query: 117 TFI-----EGITYVENS-RPTK-HSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGP 169
+F+ +G+ + + S RP E++ + +R K++ ++ N D + T
Sbjct: 719 SFLRVDMAKGLFHFDGSFRPCPLRQEFIGITER-------KAIKQLKTMN-DITYT---- 766
Query: 170 DAVLHLVQGNLMVLIFCSSKIACSNLA--LR---LQFDRFPGTKEYKKQEKEDLIEALKE 224
+ H+ +LIF S+ + A +R L+ D ++ +E L EA
Sbjct: 767 KVIEHVGTHRNQMLIFVHSRKETAKTAKYIRDKALEMDTINQILKHDAGTREVLSEAANA 826
Query: 225 ENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQ 284
N+ T+L++ + YG HHA ++ +R +E+ + +G +Q++ CT+TLA GVNLPA
Sbjct: 827 VNN----TDLKDILPYGFGIHHAGMSRADRTDVEDLFSSGHIQVLVCTATLAWGVNLPAH 882
Query: 285 RVIIRDSYV----GRDFISLNMYK--QMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMM 338
VII+ + V ++ L+ QM+GRAGR GE I++ T + + S++
Sbjct: 883 TVIIKGTQVYSPEKGSWVELSPQDVLQMLGRAGRPQFDTYGEGIIIT-TQGEMTYYLSLL 941
Query: 339 NAGPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQ-LKSP 388
N PI S + +L E+V N+ S E V+ L LF + L+SP
Sbjct: 942 NQQ-LPIESQFASKLVDNLNAEIVLGNVRSRDEGVEWLGYTYLFVRMLRSP 991
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 33/157 (21%), Positives = 70/157 (44%), Gaps = 9/157 (5%)
Query: 234 LEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS-- 291
L E + +GV Y+H L+ ++R++ Y +Q++ + + ++ A VI+ +
Sbjct: 1657 LAEALSHGVGYYHEALSQSDKRIVMHLYKNNAIQVLIASRDVCWELDCTAHLVIVMGTQY 1716
Query: 292 YVGRDF----ISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISS 347
+ GR+ L+ QM G+A ++ G +++ ++ + +N P+ S
Sbjct: 1717 FEGREHRYVDYPLSEVLQMFGKASQSSRDGRGRGVLMVPAVKREY-YKKFLNEA-LPVES 1774
Query: 348 HMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQ 384
H+ L D + ++ + S ED T FY+
Sbjct: 1775 HLH-NFLQDAFVTEISTRMIESGEDAINWATFTYFYR 1810
>gi|28574898|ref|NP_648818.3| lethal (3) 72Ab [Drosophila melanogaster]
gi|33112469|sp|Q9VUV9.4|U520_DROME RecName: Full=Putative U5 small nuclear ribonucleoprotein 200 kDa
helicase
gi|28380515|gb|AAF49564.4| lethal (3) 72Ab [Drosophila melanogaster]
gi|54650854|gb|AAV37006.1| LD03265p [Drosophila melanogaster]
Length = 2142
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 120/466 (25%), Positives = 217/466 (46%), Gaps = 65/466 (13%)
Query: 28 GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILE 87
G + T+ Q+ + +CT EK + + + + L++IDE H+L++ +RGP+LE
Sbjct: 571 GDHQLTREQIAATQVIVCTPEKWDIITRKGGERTFVSLVRLVIIDEIHLLHD-ERGPVLE 629
Query: 88 CVVSKVLY----LKKSIQIFAMSATIGNINALSTFI-----EGITYVENS-RPTK-HSEY 136
+V++ + ++ +++ +SAT+ N ++TF+ +G+ Y +NS RP +Y
Sbjct: 630 ALVARTIRNIETTQEEVRLVGLSATLPNYQDVATFLRVKPDKGLFYFDNSYRPVSLEQQY 689
Query: 137 VTV-DKRVFQSFDGKSLTEI-YADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSN 194
+ V +K+ + F + + EI Y ++++ G VL+F S+
Sbjct: 690 IGVTEKKALKRF--QVMNEIVYEKTMEHA--------------GRNQVLVFVHSRKETGK 733
Query: 195 LA-----LRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADL 249
A + L+ D +E +E L+ E + +T L+E + YG A HHA +
Sbjct: 734 TARAVRDMCLEQDTLGSFL----KEGSASMEVLRTEAEQVKNTELKELLPYGFAIHHAGM 789
Query: 250 TAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYV-----GRDFISLNMYK 304
T +R L+E+ + +Q++ T+TLA GVNLPA VII+ + V GR ++ L+
Sbjct: 790 TRVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQVYNPEKGR-WVELSALD 848
Query: 305 --QMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVV 362
QM+GRAGR GE I++ T L+F + PI S L D++ +
Sbjct: 849 VLQMLGRAGRPQYDTKGEGILI--TNHSELQFYLSLLNQQLPIESQF-ISKLPDMLNAEI 905
Query: 363 AANLCSSLEDVKTLIKHTLFY--QLKSPE---------DQQTFLETTLSEIV---ASLLA 408
L+D + +T Y L++P LE ++++ A L
Sbjct: 906 VLGTVQHLQDAVNWLGYTYLYIRMLRNPTLYGVSHDAIKADPLLEQHRADLLHTAACCLE 965
Query: 409 SKGTMLTMNEAGHLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLN 454
G + + GH +T + + A L+H+ ++ Y+ LL L+
Sbjct: 966 RSGLIKYDRKTGHFQVTDLGRIASHYYLTHE-TMLTYNQLLKQTLS 1010
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 88/339 (25%), Positives = 155/339 (45%), Gaps = 57/339 (16%)
Query: 39 KKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYL-- 96
K + I T +K L Q + + L ++DE ++ + GP+LE V S++ Y+
Sbjct: 1420 KGQLVITTADKWDVLSRRWKQRKNVQLVNLFIVDELQLVG-GEEGPVLEIVCSRMRYISS 1478
Query: 97 --KKSIQIFAMSATIGNINALSTFI-----EGITYVENSRPTKHSEYVTVDKRVFQSFDG 149
+K I+I A+SA++ + ++ ++ + + RP ++ G
Sbjct: 1479 QIEKQIRIVALSASLTDARDVAQWLGCNPNATFNFHPSVRPIPLELHIQ----------G 1528
Query: 150 KSLTEIYADNLDYSLTGSGP--DAVLHLVQGNLMVLIFCSSKIACSNLALR--------L 199
++T N T S P +A+L + V++F SS+ A+ L
Sbjct: 1529 YNVTH----NATRIATMSKPVYNAILKY-SAHKPVIVFVSSRKQARLTAIDVLTYAASDL 1583
Query: 200 QFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEE 259
Q +RF +E ED+ L+ D L+E + GVAY H L+A + RL+E+
Sbjct: 1584 QPNRFFHAEE------EDIKPFLERMTD----KTLKETLAQGVAYLHEGLSASDHRLVEQ 1633
Query: 260 AYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS--YVGRDFISLNMYK-----QMVGRAGR 312
+ +G +Q+ + L G+++ A VII D+ Y G++ S Y QM+GRA R
Sbjct: 1634 LFDSGAVQVAVISRDLCWGMSISAHLVIIMDTQFYNGKNH-SYEDYPITDVLQMIGRANR 1692
Query: 313 TGLQESGESIMLCK-TMQDFLRFSSMMNAGPEPISSHMD 350
+ +++C+ + +DF F +N P PI SH+D
Sbjct: 1693 PNEDADAKCVLMCQSSKKDF--FKKFINE-PLPIESHLD 1728
>gi|194873157|ref|XP_001973150.1| GG13510 [Drosophila erecta]
gi|190654933|gb|EDV52176.1| GG13510 [Drosophila erecta]
Length = 2142
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 120/466 (25%), Positives = 217/466 (46%), Gaps = 65/466 (13%)
Query: 28 GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILE 87
G + T+ Q+ + +CT EK + + + + L++IDE H+L++ +RGP+LE
Sbjct: 571 GDHQLTREQIAATQVIVCTPEKWDIITRKGGERTFVSLVRLVIIDEIHLLHD-ERGPVLE 629
Query: 88 CVVSKVLY----LKKSIQIFAMSATIGNINALSTFI-----EGITYVENS-RPTK-HSEY 136
+V++ + ++ +++ +SAT+ N ++TF+ +G+ Y +NS RP +Y
Sbjct: 630 ALVARTIRNIETTQEEVRLVGLSATLPNYQDVATFLRVKPDKGLFYFDNSYRPVSLEQQY 689
Query: 137 VTV-DKRVFQSFDGKSLTEI-YADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSN 194
+ V +K+ + F + + EI Y ++++ G VL+F S+
Sbjct: 690 IGVTEKKALKRF--QVMNEIVYEKTMEHA--------------GRNQVLVFVHSRKETGK 733
Query: 195 LA-----LRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADL 249
A + L+ D +E +E L+ E + +T L+E + YG A HHA +
Sbjct: 734 TARAVRDMCLEQDTLGSFL----KEGSASMEVLRTEAEQVKNTELKELLPYGFAIHHAGM 789
Query: 250 TAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYV-----GRDFISLNMYK 304
T +R L+E+ + +Q++ T+TLA GVNLPA VII+ + V GR ++ L+
Sbjct: 790 TRVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQVYNPEKGR-WVELSALD 848
Query: 305 --QMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVV 362
QM+GRAGR GE I++ T L+F + PI S L D++ +
Sbjct: 849 VLQMLGRAGRPQYDTKGEGILI--TNHSELQFYLSLLNQQLPIESQF-ISKLPDMLNAEI 905
Query: 363 AANLCSSLEDVKTLIKHTLFY--QLKSPE---------DQQTFLETTLSEIV---ASLLA 408
L+D + +T Y L++P LE ++++ A L
Sbjct: 906 VLGTVQHLQDAVNWLGYTYLYIRMLRNPTLYGVSHDAIKADPLLEQHRADLLHTAACCLE 965
Query: 409 SKGTMLTMNEAGHLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLN 454
G + + GH +T + + A L+H+ ++ Y+ LL L+
Sbjct: 966 RSGLIKYDRKTGHFQVTDLGRIASHYYLTHE-TMLTYNQLLKQTLS 1010
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 87/339 (25%), Positives = 155/339 (45%), Gaps = 57/339 (16%)
Query: 39 KKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYL-- 96
K + I T +K L Q + + L ++DE ++ + GP++E V S++ Y+
Sbjct: 1420 KGQLVITTADKWDVLSRRWKQRKNVQLVNLFIVDELQLVG-GEDGPVMEIVCSRMRYISS 1478
Query: 97 --KKSIQIFAMSATIGNINALSTFI-----EGITYVENSRPTKHSEYVTVDKRVFQSFDG 149
+K I+I A+SA++ + ++ ++ + + RP ++ G
Sbjct: 1479 QIEKQIRIVALSASLTDARDVAQWLGCNPNATFNFHPSVRPIPLELHIQ----------G 1528
Query: 150 KSLTEIYADNLDYSLTGSGP--DAVLHLVQGNLMVLIFCSSKIACSNLALR--------L 199
++T N T S P +A+L + V++F SS+ A+ L
Sbjct: 1529 YNVTH----NATRIATMSKPVYNAILKY-SAHKPVIVFVSSRKQARLTAIDVLTYAASDL 1583
Query: 200 QFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEE 259
Q +RF +E ED+ L+ D L+E + GVAY H L+A + RL+E+
Sbjct: 1584 QPNRFFHAEE------EDIKPFLERMTD----KTLKETLAQGVAYLHEGLSASDHRLVEQ 1633
Query: 260 AYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS--YVGRDFISLNMYK-----QMVGRAGR 312
+ +G +Q+ + L G+++ A VII D+ Y G++ S Y QM+GRA R
Sbjct: 1634 LFDSGAVQVAVVSRDLCWGMSISAHLVIIMDTQFYNGKNH-SYEDYPITDVLQMIGRANR 1692
Query: 313 TGLQESGESIMLCK-TMQDFLRFSSMMNAGPEPISSHMD 350
+ +++C+ + +DF F +N P PI SH+D
Sbjct: 1693 PNDDADAKCVLMCQSSKKDF--FKKFINE-PLPIESHLD 1728
>gi|448480377|ref|ZP_21604552.1| DEAD/DEAH box helicase [Halorubrum arcis JCM 13916]
gi|445822164|gb|EMA71937.1| DEAD/DEAH box helicase [Halorubrum arcis JCM 13916]
Length = 666
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 101/387 (26%), Positives = 169/387 (43%), Gaps = 38/387 (9%)
Query: 28 GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENR--IDEIGLIVIDEFHMLNEPQRGPI 85
G + T L + + T EK + S I+ +DE+ +V+DE H+L +RGP
Sbjct: 97 GDFDATGEALAGNDVVVATSEK----VDSAIRNGASWVDELACVVVDEVHLLGAKRRGPT 152
Query: 86 LECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQ 145
LE ++ + +Q A+SAT+ N +A++ +++ + RP + V V V
Sbjct: 153 LEVTLATLRRRNPELQTVALSATVDNPDAIADWLDAELVESDWRPVELRTGVAVGGEV-- 210
Query: 146 SFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNL----------------------MVL 183
+FD + + D++ G G + G+ L
Sbjct: 211 AFDDGTSLSVDVDSIADGADGEGDEVGDAGEVGDAGDANDPTEVTAALVADAVADGGQCL 270
Query: 184 IFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLST-NLEECILYGV 242
F S+ +LA RL D E ++ + DG L+ L +C+ GV
Sbjct: 271 AFVRSRREAVDLAERLADDGL--AAELGVEDAAAAAAEEATDVDGTLTGRQLADCLRAGV 328
Query: 243 AYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYV----GRDFI 298
A+HHA L +G R ++E A+ + IC T TLAAG+N+PA+RV++RD G +I
Sbjct: 329 AFHHAGLRSGHRGVVESAFRERDVACICATPTLAAGINVPARRVVVRDQRRYGEGGMSWI 388
Query: 299 SLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHM-DPPTLVDL 357
QM GRAGR GL GE++++ + PE + S + DP L
Sbjct: 389 PTLEVHQMCGRAGRPGLDPHGEAVLVADADTRDEVHERYVEGEPEAVESQLADPAALRTH 448
Query: 358 ILEVVAANLCSSLEDVKTLIKHTLFYQ 384
+L VA ++ ++ + + T + +
Sbjct: 449 VLAAVATGFAATETEILDVFEGTFYAR 475
>gi|195127732|ref|XP_002008322.1| GI13421 [Drosophila mojavensis]
gi|193919931|gb|EDW18798.1| GI13421 [Drosophila mojavensis]
Length = 2142
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 120/466 (25%), Positives = 217/466 (46%), Gaps = 65/466 (13%)
Query: 28 GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILE 87
G + T+ Q+ + +CT EK + + + + L++IDE H+L++ +RGP+LE
Sbjct: 571 GDHQLTREQIAATQVIVCTPEKWDIITRKGGERTFVSLVRLVIIDEIHLLHD-ERGPVLE 629
Query: 88 CVVSKVLY----LKKSIQIFAMSATIGNINALSTFI-----EGITYVENS-RPTK-HSEY 136
+V++ + ++ +++ +SAT+ N ++TF+ +G+ Y +NS RP +Y
Sbjct: 630 ALVARTIRNIETTQEDVRLVGLSATLPNYQDVATFLRVKPDKGLFYFDNSYRPVALEQQY 689
Query: 137 VTV-DKRVFQSFDGKSLTEI-YADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSN 194
+ V +K+ + F + + EI Y ++++ G VL+F S+
Sbjct: 690 IGVTEKKALKRF--QVMNEIVYEKTMEHA--------------GRNQVLVFVHSRKETGK 733
Query: 195 LA-----LRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADL 249
A + L+ D +E +E L+ E + +T L+E + YG A HHA +
Sbjct: 734 TARAVRDMCLEQDTLGSFL----REGSASMEVLRTEAEQVKNTELKELLPYGFAIHHAGM 789
Query: 250 TAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYV-----GRDFISLNMYK 304
T +R L+E+ + +Q++ T+TLA GVNLPA VII+ + V GR ++ L+
Sbjct: 790 TRVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQVYNPEKGR-WVELSALD 848
Query: 305 --QMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVV 362
QM+GRAGR GE I++ T L+F + PI S L D++ +
Sbjct: 849 VLQMLGRAGRPQYDTKGEGILI--TNHSELQFYLSLLNQQLPIESQF-ISKLPDMLNAEI 905
Query: 363 AANLCSSLEDVKTLIKHTLFY--QLKSPE---------DQQTFLETTLSEIV---ASLLA 408
L+D + +T Y L++P LE ++++ A L
Sbjct: 906 VLGTVQHLQDAVNWLGYTYLYIRMLRNPTLYGVSHDAIKADPLLEQHRADLLHTAACSLE 965
Query: 409 SKGTMLTMNEAGHLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLN 454
G + + GH +T + + A L+H+ ++ Y+ LL L+
Sbjct: 966 RSGLIKYDRKTGHFQVTDLGRIASHYYLTHE-TMLTYNQLLKQTLS 1010
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 86/338 (25%), Positives = 152/338 (44%), Gaps = 55/338 (16%)
Query: 39 KKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYL-- 96
K + I T +K L Q + +I L ++DE ++ + GP++E V S++ Y+
Sbjct: 1420 KGQLIITTADKWDVLSRRWKQRKNVQQINLFIVDELQLVG-GEEGPVMEIVCSRMRYISS 1478
Query: 97 --KKSIQIFAMSATIGNINALSTFI-----EGITYVENSRPTKHSEYVTVDKRVFQSFDG 149
+K I+I A+SA++ + ++ ++ + + RP ++ Q F+
Sbjct: 1479 QIEKQIRIVALSASLTDARDVAQWLGCNPNATFNFHPSVRPIPLELHI-------QGFN- 1530
Query: 150 KSLTEIYADNLDYSLTGSGP--DAVLHLVQGNLMVLIFCSSKIA-------CSNLALRLQ 200
N T S P +A+L +++ S K A + A LQ
Sbjct: 1531 ------VTHNATRIATMSKPVYNAILKYSPHKPVIVFVSSRKQARLTAIDILTYAASDLQ 1584
Query: 201 FDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEA 260
+RF +ED I+ E K L+E + GVAY H L+A + RL+E+
Sbjct: 1585 PNRF-------FHAEEDDIQPFLERMSDK---TLKETLAQGVAYLHEGLSASDHRLVEQL 1634
Query: 261 YLAGTLQIICCTSTLAAGVNLPAQRVIIRDS--YVGRDFISLNMYK-----QMVGRAGRT 313
+ +G +Q+ + L G+++ A VI+ D+ Y G++ S Y QM+GRA R
Sbjct: 1635 FDSGAVQLAVVSRDLCWGMSISAHLVIVMDTQFYNGKNH-SYEDYPITDVLQMIGRANRP 1693
Query: 314 GLQESGESIMLCK-TMQDFLRFSSMMNAGPEPISSHMD 350
+ +++C+ + +DF F +N P PI SH+D
Sbjct: 1694 NEDADAKCVLMCQSSKKDF--FKKFINE-PLPIESHLD 1728
>gi|367020564|ref|XP_003659567.1| hypothetical protein MYCTH_2296784 [Myceliophthora thermophila ATCC
42464]
gi|347006834|gb|AEO54322.1| hypothetical protein MYCTH_2296784 [Myceliophthora thermophila ATCC
42464]
Length = 2209
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 124/468 (26%), Positives = 228/468 (48%), Gaps = 63/468 (13%)
Query: 33 TKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSK 92
TK+Q+++ + + T EK + + + + LI+IDE H+L++ RGP+LE +VS+
Sbjct: 628 TKQQISETQVIVTTPEKWDVITRKATDISYTNLVRLIIIDEIHLLHD-DRGPVLESIVSR 686
Query: 93 VL----YLKKSIQIFAMSATIGNINALSTFI-----EGITYVENS-RPTK-HSEYVTVDK 141
+ + ++I +SAT+ N +++F+ +G+ + + S RP E++ V +
Sbjct: 687 TIRRTEQTGEPVRIVGLSATLPNYRDVASFLRVDFEKGMFHFDGSYRPCPLRQEFIGVTE 746
Query: 142 RVFQSFDGKSLTEIYA-DNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLA--LR 198
R K++ ++ +++ Y + H+ Q +L+F S+ + A +R
Sbjct: 747 R-------KAIKQLKTMNDITYQ------KVLEHVGQNRHQMLVFVHSRKETAKTAKYIR 793
Query: 199 ---LQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERR 255
L+ + ++ +E L EA N+ T+L++ + YG HHA +T +R
Sbjct: 794 DKALEMETIDQILKHDAGTREVLSEAANSVNN----TDLKDILPYGFGIHHAGMTREDRT 849
Query: 256 LIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYV----GRDFISLNMYK--QMVGR 309
+EE + +G +Q++ CT+TLA GVNLPA VII+ + V ++ L+ QM+GR
Sbjct: 850 DVEELFASGHIQVLVCTATLAWGVNLPAHTVIIKGTQVYSPEKGSWVELSPQDVLQMLGR 909
Query: 310 AGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAANLCSS 369
AGR + GE I++ T + + S++N PI S + + +L E+V N+ S
Sbjct: 910 AGRPQFDKYGEGIIIT-THGEIPYYLSLLNQQ-LPIESQLASKLVDNLNAEIVLGNVRSR 967
Query: 370 LEDVKTLIKHTLFYQ-LKSP---------EDQQTFLETTLSEI-VASLLASKGTMLTMNE 418
E V+ L LF + L+SP ED + + I A+++ K ++ +E
Sbjct: 968 DEGVEWLGYTYLFVRMLRSPGLYSVGPEYEDDAALEQKRVDLIHSAAMVLKKSNLIKYDE 1027
Query: 419 -AGHLSLTSIAKAAVQAGLSHDVCLIIYSDL-LHNKLNFCLLNSLHML 464
G + T + + A SH I YS + +NKL +N + +
Sbjct: 1028 KTGRMQSTELGRIA-----SH--YYITYSSMDTYNKLIQPSMNDIELF 1068
Score = 47.4 bits (111), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 74/344 (21%), Positives = 147/344 (42%), Gaps = 48/344 (13%)
Query: 63 IDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKS----IQIFAMSATIGNINALSTF 118
+ + L + DE HML Q G I E +VS++ Y++ ++I +S ++ N + +
Sbjct: 1501 VQTVELFIADELHMLGG-QMGYIYEIIVSRMHYIRTQTELPMRIVGLSVSLANARDVGEW 1559
Query: 119 IEGITY-VENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQ 177
I+ + + N P H V ++ + +S T + +L ++ AV +
Sbjct: 1560 IDAKKHDIYNFSP--HVRPVPLELHI------QSYTIPHFPSLMLAMAKPTYLAVTQM-S 1610
Query: 178 GNLMVLIFCSSKIACSNLALRL--------QFDRFPGTKEYKKQEKEDLIEALKEENDGK 229
+ +IF S+ A L DRF + L++ ++EE
Sbjct: 1611 ADQPAIIFVPSRKQTRATARDLLTACLADDDEDRF---LHVDVDQLRKLLDRVQEEA--- 1664
Query: 230 LSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIR 289
L E + +GV Y+H L+ +RR+++ Y G +Q++ + + ++ A V++
Sbjct: 1665 ----LAEALSHGVGYYHEALSQSDRRIVKHLYNNGAIQVLIASRDVCWELDCTAHLVVVM 1720
Query: 290 DS--YVGRDF----ISLNMYKQMVGRAGRTGLQESGES---IMLCKTMQDFLRFSSMMNA 340
+ + GR+ L+ QM G+A + + G S +ML +++ + +N
Sbjct: 1721 GTQYFEGREHRYVDYPLSEVLQMFGKAVQPS--KDGRSRGVLMLPAVKREY--YKKFLNE 1776
Query: 341 GPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQ 384
P+ SH++ L D + ++ + S ED T FY+
Sbjct: 1777 A-LPVESHLN-NFLHDAFVTEISTKMIESGEDAINWATFTYFYR 1818
>gi|367023294|ref|XP_003660932.1| hypothetical protein MYCTH_2116402 [Myceliophthora thermophila ATCC
42464]
gi|347008199|gb|AEO55687.1| hypothetical protein MYCTH_2116402 [Myceliophthora thermophila ATCC
42464]
Length = 1351
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/309 (29%), Positives = 151/309 (48%), Gaps = 30/309 (9%)
Query: 31 PPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDE-IGLIVIDEFHMLNEPQRGPILECV 89
P R++ SI + T EK + R+ + + L +IDE H+L + RG LE V
Sbjct: 208 PAEMRRVGDASIIVTTPEKWDSITRKWQDHRRLLQMVELFLIDEVHILKD-VRGATLEAV 266
Query: 90 VSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEY------VTVDKRV 143
VS++ + +++ A+SAT+ N ++ ++ G + P + V + K V
Sbjct: 267 VSRMKAIGANVRFIALSATVPNSEDIARWL-GRNHTNQQLPAYREAFGEDFRPVKLQKFV 325
Query: 144 FQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRLQFDR 203
+ F+ S ++ LD L G +L + +L+FC ++ +C + A L
Sbjct: 326 Y-GFESTSNDFMFDKFLDQKLPG-----LLSKHAEHKPILVFCFTRKSCESTAAML---- 375
Query: 204 FPGTKEYKKQEKE-DLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYL 262
E+ E D + + + +S L+E I +GVA+HHA L A +R +E+ +L
Sbjct: 376 ----AEFAADRPERDKLWPVPSQGISVMSRELQETIGFGVAFHHAGLDAQDRSAVEQGFL 431
Query: 263 AGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGRDFISLNMYK-----QMVGRAGRTGLQE 317
G L +ICCTSTLA G+NLP V+++ + VG L Y QM+GRAGR +
Sbjct: 432 TGQLGVICCTSTLAVGINLPCHTVVLKGT-VGFTNEKLEEYSDLEVMQMLGRAGRPQFDD 490
Query: 318 SGESIMLCK 326
S +I+L +
Sbjct: 491 SATAIILTR 499
>gi|320100660|ref|YP_004176252.1| DEAD/DEAH box helicase [Desulfurococcus mucosus DSM 2162]
gi|319753012|gb|ADV64770.1| DEAD/DEAH box helicase domain protein [Desulfurococcus mucosus DSM
2162]
Length = 714
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 156/591 (26%), Positives = 259/591 (43%), Gaps = 70/591 (11%)
Query: 78 NEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSE-Y 136
+P+RGPI+E + +++L K+ +++ +SAT+GN L+ ++ RP K E Y
Sbjct: 153 GDPERGPIIEVIAARLL--KRGVRVIGLSATVGNPGELADWLHATLVATGWRPVKLVEGY 210
Query: 137 VTV-DKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLH-LVQGNLMVLIFCSSKIACSN 194
+ + R+ +G++ + D D L D LH V+ + L+F ++
Sbjct: 211 LEKHEWRIVFPSEGRA-EAVEEDTGDPFL-----DIPLHNAVELGVQTLVFTHNRRRVEE 264
Query: 195 LALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGER 254
A + R P K L+ L+E L E + GVA+HHA L+ R
Sbjct: 265 YAEKAA-QRLPMAPVGDALAK--LLRELEEAPTSVERDGLSELMKRGVAFHHAGLSGVAR 321
Query: 255 RLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIR----DSYVGRDF-ISLNMYKQMVGR 309
++E+A+ ++I+ T TLAAGVNLPA+RV++ D GR IS++ YKQM GR
Sbjct: 322 SIVEKAFRERLIRILYATPTLAAGVNLPARRVLVSVKRYDPARGRKVSISVSEYKQMAGR 381
Query: 310 AGRTGLQESGESIML-CKTMQDFLRFSSMMNAGPEPISSH-MDPPTLVDLILEVVAANLC 367
AGR E GESI++ + ++ L++ + PEP++ + +L +L +VA+
Sbjct: 382 AGRPRFDEKGESIIVDASSSREALKY---IEGSPEPVAGKLLSERSLRIHVLSLVASGEA 438
Query: 368 SSLEDVKTLIKHTLFYQLKSPEDQQTFLETTLSEIVASLLASKGTMLTMNEAGHLSLTSI 427
SS + + TL +K D + E LL T L M E SL +
Sbjct: 439 SSTREAVEALSATL--SMKQSGDPGFYAGKV--EAAVKLL----TELGMIEEAGGSLRAS 490
Query: 428 AKAAVQAGLSHDVCLI-IYSDLLHNKLNFCLLNSLHMLFLVIPLEYRIPSDGILLSRSKV 486
A + + D I +Y L N L L++L +V S +
Sbjct: 491 ALGRITSYTYLDPLTISVYRGL--KPPNPGL--DLYLLHVV--------------SMTPD 532
Query: 487 YDRYTKFHPQTLRVAEALGVTENLVALNVTGK--LKDEKKA------LLCRFFHACILYD 538
+ R + + RV L VAL+++G+ + +A L F HA ILYD
Sbjct: 533 FKRGSPYIQG--RVVAGL----EDVALDMSGEGLIPGPGRAGVDYDDWLEAFVHAMILYD 586
Query: 539 VLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELWCYKQLLTDLPQTLM 598
+N + ++ Y + L + + ++ + R L ++ Y+ L L + L
Sbjct: 587 WINEASEDEIVGKYSVGPGDLYSMRDTAAWITHALARVEGVLGDIAFYRA-LDKLSKRLE 645
Query: 599 YCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELIARADAKEMVAKIRHLP 649
+ L L + RAR L+ G+ +L +A A V+ I LP
Sbjct: 646 KGVREDALELASLRLIGRVRARILIEHGFKTLRDLAEAP----VSSIASLP 692
>gi|358059997|dbj|GAA94271.1| hypothetical protein E5Q_00920 [Mixia osmundae IAM 14324]
Length = 1426
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 92/301 (30%), Positives = 151/301 (50%), Gaps = 35/301 (11%)
Query: 39 KKSIYICTIEKGSKLIGSLIQENR--IDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYL 96
K++ I T + I EN+ + I LI IDE H LNE +RG LE +V ++
Sbjct: 427 KQARVIVTTPEKWDSITRRWPENQAMLSSIALICIDECHTLNE-KRGSTLEVIVMRMRSR 485
Query: 97 KKSIQIFAMSATIGNINALSTFIEG--------ITYVENSRPTKHSEYVTVDKRVFQSFD 148
+++ A+SAT+ N++ ++ ++ +++ + RP + V R Q+ D
Sbjct: 486 VLGLRVIAVSATVPNVSDVAQWLHASDGSPAICLSFGDEVRPCALTRAVCAYPRKPQTND 545
Query: 149 GKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRLQFDRFPGTK 208
++A +LD L V+ + LIFC+S+ AC+ A L D G
Sbjct: 546 F-----VFARSLDSKLID-----VVQKYCDHRPALIFCNSRKACAQAAETLVADI--GKA 593
Query: 209 EYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQI 268
+ K + ++A E+ + L G+ +HHA L+ +R+LIE+++L G L
Sbjct: 594 KAKPWPRSKPMQARPED------STLAYTTAAGIGFHHAGLSQRDRQLIEQSFLDGALHA 647
Query: 269 ICCTSTLAAGVNLPAQRVIIRDSYV-----GRDFISLNMYKQMVGRAGRTGLQESGESIM 323
IC TSTLA GVNLPA VII+ + + +D+ +L+M QM GRAGR +SG ++
Sbjct: 648 ICTTSTLAVGVNLPAYAVIIKGTRIYSEGSMQDYSNLDML-QMAGRAGRPQFDKSGVVVI 706
Query: 324 L 324
+
Sbjct: 707 M 707
>gi|321461137|gb|EFX72172.1| hypothetical protein DAPPUDRAFT_216243 [Daphnia pulex]
Length = 1906
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 118/459 (25%), Positives = 205/459 (44%), Gaps = 65/459 (14%)
Query: 28 GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILE 87
G P R +++ + + T EK + S + + + LI+IDE H+L E RGP+LE
Sbjct: 1143 GDVTPDVRAISRADVIVTTPEKWDGVSRSWQTRDYVRAVALIIIDEIHLLGE-DRGPVLE 1201
Query: 88 CVVSKVLYLK----KSIQIFAMSATIGNINALSTFIE-GITYVENSRPTKHSEYVTVDKR 142
+VS+ ++ +S+++ +S + N L+ ++ G + N RP+ + V
Sbjct: 1202 VIVSRTNFIASHTGRSLRLIGLSTAVANARDLADWLNIGQVGLFNFRPSVRPVPLEVH-- 1259
Query: 143 VFQSFDGKSLTEIYA---DNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRL 199
F GK A ++ PD VL+F SS+ AL L
Sbjct: 1260 -ISGFPGKHYCPRMATMNKPTFQAIKQHSPDKP---------VLVFVSSRRQTRLTALDL 1309
Query: 200 -----------QFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHAD 248
QF R P +++ E L ++++ NL+ + +GV HHA
Sbjct: 1310 IGYLAAEDSPRQFVRMP------ERDMEQLTISIRD-------PNLKLTLSFGVGIHHAG 1356
Query: 249 LTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS--YVG--RDFISLNMYK 304
LT +RRL+EE ++ +Q++ T+TLA GVN PA V+I+ + Y G R ++ + +
Sbjct: 1357 LTEKDRRLVEELFVNQKIQVLIATATLAWGVNFPAHLVVIKGTEYYDGKSRRYVDMPITD 1416
Query: 305 --QMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVV 362
QM+GRAGR + G + +L ++ F P P+ S + L E+V
Sbjct: 1417 VLQMMGRAGRPQYDDHGVACVLVHDIKK--DFYKKFLYEPFPVESSLLDVLPEHLNAEIV 1474
Query: 363 AANLCSSLEDV---------KTLIKHTLFYQLKS--PEDQQTFLETTLSEIVASLLASKG 411
A +CS + + + L+++ +Y L+ P D +L T+L S+L +
Sbjct: 1475 AGTICSKQDAIDYLTWTYFFRRLLQNPAYYGLEQLEPTDVNHYL-TSLIHRSLSVLEAAS 1533
Query: 412 TMLTMNEAGHLSLTSIAKAAVQAGLSHDVCLIIYSDLLH 450
+ +E G ++ TS+ + A LS+ + L H
Sbjct: 1534 CLEIEDEGGRVAPTSLGRIASYYYLSYHTLQLFRDRLGH 1572
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 108/428 (25%), Positives = 187/428 (43%), Gaps = 64/428 (14%)
Query: 66 IGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKS----IQIFAMSATIGNINALSTFI-- 119
+ L++IDE H+L+ RGP++E +V++ L +S I+I +SAT+ N ++ F+
Sbjct: 339 VKLLIIDEVHLLHG-DRGPVVEALVARTLRQVESSQMMIRILGLSATLPNYVDVAQFLHV 397
Query: 120 ---EGITYVENS-RPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHL 175
+G+ Y ++ RP S Q+F G + E+ + D V +
Sbjct: 398 NPYKGLFYFDSRFRPVPLS----------QTFIG--VKEVNPMRQMQQMDFVCFDKVAAM 445
Query: 176 VQGNLMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDG------- 228
VQ V++F ++ A A L+ QEK L E+N G
Sbjct: 446 VQQGHQVMVFVHARNATLKTAQTLRM---------IAQEKNQLHLFQPEDNSGFSTAMRT 496
Query: 229 ---KLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQR 285
+ +L + G A HHA + +R L+E+ + G +++ CT+TLA GVNLPA
Sbjct: 497 AGKSRNRHLVDLFKDGFAIHHAGMLRSDRNLVEKMFADGMARVLVCTATLAWGVNLPAHA 556
Query: 286 VIIRDSYV----GRDFISLNMYK--QMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMN 339
VII+ + + F+ + + Q+ GRAGR +SG ++ T D L +
Sbjct: 557 VIIKGTEIYDAKHGAFVDIGILDVLQIFGRAGRPQFDKSGHGTII--TSHDKLAHYLSLL 614
Query: 340 AGPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQL-KSP-----EDQQT 393
PI S + +L E+ + + E V+ L LF ++ K+P Q
Sbjct: 615 TCQYPIESSFEKSMTDNLNAEITLGTVANVDEAVQWLSYTYLFIRMRKNPIAYGINLDQI 674
Query: 394 FLETTLSE------IVASLLASKGTMLTMNE-AGHLSLTSIAKAAVQAGLSHDVCLIIYS 446
F + L ++A+ K M+ E G L T + + A + +D + I++
Sbjct: 675 FDDPHLGGKRRELIVMAARSLDKARMIRFEEKTGLLHATDLGRTASHFYIKYD-TVEIFN 733
Query: 447 DLLHNKLN 454
+ +H +N
Sbjct: 734 EQMHQAMN 741
>gi|291443314|ref|ZP_06582704.1| DEAD/DEAH box helicase domain-containing protein [Streptomyces
roseosporus NRRL 15998]
gi|291346261|gb|EFE73165.1| DEAD/DEAH box helicase domain-containing protein [Streptomyces
roseosporus NRRL 15998]
Length = 771
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 139/310 (44%), Gaps = 36/310 (11%)
Query: 37 LNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYL 96
+ +++ T EK + + + + E+G +V+DE H+L +P RG +LE ++++V
Sbjct: 93 IRSADVWVATTEKFEAICRAGSLRDSLAEVGCLVVDEIHLLGDPTRGAVLEALLARVRED 152
Query: 97 KKSIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIY 156
+I +SAT+ N ++ ++ RPT+ + + + V
Sbjct: 153 SAGTRIVGLSATVANAEEVARWLGARLVRTTWRPTRLTWQLPLLDPV------------- 199
Query: 157 ADNLDYSL-----TGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRLQFDRFPGTKEYK 211
D D++ TG+ + G VL+FC SK + AL L DR T
Sbjct: 200 -DETDWAARAAVRTGTAVRIARQVTDGGGSVLVFCGSKRRVRSTALALAADRGVSTVGVD 258
Query: 212 KQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICC 271
+ E +E L C GV H+ D +R E+A+ A ++
Sbjct: 259 ADDAE-TVERL--------------CTRAGVRLHYRDWP--YKREAEQAFRAREADVLVA 301
Query: 272 TSTLAAGVNLPAQRVIIRDSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDF 331
TST+AAGVNLPA+ VI+ D+ +G D + ++M +QM GRAGR G E L +
Sbjct: 302 TSTVAAGVNLPARAVIVSDTTLGMDRVEVSMVQQMFGRAGRIGAGEREGWAFLLTDPAER 361
Query: 332 LRFSSMMNAG 341
+ + + AG
Sbjct: 362 AHWQARLAAG 371
>gi|164656066|ref|XP_001729161.1| hypothetical protein MGL_3628 [Malassezia globosa CBS 7966]
gi|159103051|gb|EDP41947.1| hypothetical protein MGL_3628 [Malassezia globosa CBS 7966]
Length = 2211
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 134/486 (27%), Positives = 214/486 (44%), Gaps = 69/486 (14%)
Query: 9 LAKAAEEFKFYLEEYAGV----KGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRID 64
+A+ A +F+ LE Y V G TK Q+ + + + T EK + + +
Sbjct: 581 VAEQANQFRSRLEPYGVVVNELTGDSQLTKAQIAETHVIVTTPEKWDVISRKSSDTSYTN 640
Query: 65 EIGLIVIDEFHMLNEPQRGPILECVVSKVL----YLKKSIQIFAMSATIGNINALSTFIE 120
+ L+++DE H+L++ RGP+LE +V++ + L ++I +SAT+ N ++ F+
Sbjct: 641 LVRLLIVDEIHLLHD-DRGPVLEAIVARTIRRMEQLNDPVRIIGLSATLPNYQDVAAFLR 699
Query: 121 -----GITYVE-NSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLH 174
G+ Y E N RP + Q F G LTE A + D V+
Sbjct: 700 VNPASGLLYFESNMRPCP----------LRQEFIG--LTETKAIKRLQLMNEVTYDKVME 747
Query: 175 LVQGNLMVLIFCSSKIACSNLA--------LRLQFDRF-PGTKEYKKQEKEDLIEALKEE 225
N +LIF S+ + A R D F P T ++ L EA +E
Sbjct: 748 HAGKN-QILIFTHSRKETAKTAKFLRDTAEARETLDVFLPSTG----ASRDVLREAAEEA 802
Query: 226 NDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQR 285
D NL EC+ YG HHA +T +R L+E+ + +Q++ T+TLA GVNLPA
Sbjct: 803 KDA----NLRECLQYGFGIHHAGMTRADRELVEDLFAGKHIQVLVSTATLAWGVNLPAHT 858
Query: 286 VIIRDSYVGRD------FISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMN 339
VII+ + + +S QM+GRAGR GE I++ + + + S++N
Sbjct: 859 VIIKGTQIYNPEKSRWCELSPQDMLQMLGRAGRPQFDTIGEGIIITQ-HNELQYYLSLLN 917
Query: 340 AGPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFY--QLKSPE-------- 389
PI S +L E+V + + E V T + +T Y L+SP
Sbjct: 918 QQ-LPIESQFVSRLADNLNAEIVLGTIRNRDEAV-TWLGYTYLYVRMLRSPALYCVTPDY 975
Query: 390 -DQQTFLETTLSEIV---ASLLASKGTMLTMNEAGHLSLTSIAKAAVQAGLSHDVCLIIY 445
+ FLE ++IV A LL G + + G + +A+ A L+H + Y
Sbjct: 976 IEDDPFLEQKRADIVHSAAVLLEKAGLLRYDRKTGLFTSNELARIAAHYYLTH-TSMGTY 1034
Query: 446 SDLLHN 451
LH+
Sbjct: 1035 HKHLHS 1040
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 92/408 (22%), Positives = 169/408 (41%), Gaps = 44/408 (10%)
Query: 12 AAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVI 71
AA + +F +E + + R L + + T E+ L Q + + L ++
Sbjct: 1423 AAWKSRFPSKEIVSLASETSTNLRLLELADLVVATPEQWDVLSRRWRQRKHVQNVALYIL 1482
Query: 72 DEFHMLNEPQRGPILECVVSKVLYL----KKSIQIFAMSATIGNINALSTFIEGITYVEN 127
D+ H+L + GP E V S+ ++ ++S + +SA I N + + ++ G T+ +
Sbjct: 1483 DDLHILTDTYVGPTYEVVGSRARFVAAQTERSTRFVGLSAPISNASDVGEWL-GATHTLS 1541
Query: 128 SRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFC- 186
PT + V + F SL A ++ P N L+F
Sbjct: 1542 FAPTARPVPMEVHIQPFNVPHFPSLMIAMAKPAYLAIVEYAP---------NQPTLVFVP 1592
Query: 187 ---SSKIACSN-LALRLQFDRFPGTKE---------YKKQEKEDLIEALKEENDGKLSTN 233
+K+ + LA L + G + E+EDL L D T
Sbjct: 1593 TRKQTKLTVHDILAYALADSQHSGDGGDETGQTECCFLNMEREDLQPHLDRVED----TE 1648
Query: 234 LEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRD--S 291
L EC+ YG+A++H L+ G+RR++E + AG +Q++ + + + A V++ +
Sbjct: 1649 LAECLAYGIAFYHEGLSKGDRRIVERLFNAGAIQVMVASKDTVWSLPVQAHLVLLLSLQT 1708
Query: 292 YVGR-----DFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPIS 346
Y GR D+ +M +MVG+ Q ++LC+ + F + G P+
Sbjct: 1709 YEGREHRYVDYALTDML-EMVGKCVLPDEQGRSRCMLLCQANRKNY-FKKFLAEG-LPVE 1765
Query: 347 SHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQLKSPEDQQTF 394
S + T L E+VA + V ++ TL Y+ + P++ Q +
Sbjct: 1766 SRLGTYTQDFLNAEIVARTVQDKQGAVD-ILTWTLMYR-RLPKNPQAY 1811
>gi|198464969|ref|XP_001353434.2| GA19239 [Drosophila pseudoobscura pseudoobscura]
gi|198149958|gb|EAL30943.2| GA19239 [Drosophila pseudoobscura pseudoobscura]
Length = 2142
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 119/466 (25%), Positives = 217/466 (46%), Gaps = 65/466 (13%)
Query: 28 GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILE 87
G + T+ Q+ + +CT EK + + + + L++IDE H+L++ +RGP+LE
Sbjct: 571 GDHQLTREQIAATQVIVCTPEKWDIITRKGGERTFVSLVRLVIIDEIHLLHD-ERGPVLE 629
Query: 88 CVVSKVLY----LKKSIQIFAMSATIGNINALSTFI-----EGITYVENS-RPTK-HSEY 136
+V++ + ++ +++ +SAT+ N ++TF+ +G+ Y +NS RP +Y
Sbjct: 630 ALVARTIRNIETTQEDVRLVGLSATLPNYQDVATFLRVKPDKGLFYFDNSYRPVSLEQQY 689
Query: 137 VTV-DKRVFQSFDGKSLTEI-YADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSN 194
+ V +K+ + F + + EI Y ++++ G VL+F S+
Sbjct: 690 IGVTEKKALKRF--QVMNEIVYEKTMEHA--------------GRNQVLVFVHSRKETGK 733
Query: 195 LA-----LRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADL 249
A + L+ D +E +E L+ E + ++ L+E + YG A HHA +
Sbjct: 734 TARAVRDMCLEQDTLGSFL----REGSASMEVLRTEAEQVKNSELKELLPYGFAIHHAGM 789
Query: 250 TAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYV-----GRDFISLNMYK 304
T +R L+E+ + +Q++ T+TLA GVNLPA VII+ + V GR ++ L+
Sbjct: 790 TRVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQVYNPEKGR-WVELSALD 848
Query: 305 --QMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVV 362
QM+GRAGR GE I++ T L+F + PI S L D++ +
Sbjct: 849 VLQMLGRAGRPQYDTKGEGILI--TNHSELQFYLSLLNQQLPIESQF-ISKLPDMLNAEI 905
Query: 363 AANLCSSLEDVKTLIKHTLFY--QLKSPE---------DQQTFLETTLSEIV---ASLLA 408
L+D + +T Y L++P LE ++++ A L
Sbjct: 906 VLGTVQHLQDAVNWLGYTYLYIRMLRNPTLYGVSHDAIKADPLLEQHRADLLHTAACCLE 965
Query: 409 SKGTMLTMNEAGHLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLN 454
G + + GH +T + + A L+H+ ++ Y+ LL L+
Sbjct: 966 RSGLVKYERKTGHFQVTDLGRIASHYYLTHE-TMLTYNQLLKQTLS 1010
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 87/339 (25%), Positives = 154/339 (45%), Gaps = 57/339 (16%)
Query: 39 KKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYL-- 96
K + I T +K L Q + + L ++DE ++ + GP+LE V S++ Y+
Sbjct: 1420 KGQLVITTADKWDVLSRRWKQRKNVQLVNLFIVDELQLVG-GEEGPVLEIVCSRMRYISS 1478
Query: 97 --KKSIQIFAMSATIGNINALSTFI-----EGITYVENSRPTKHSEYVTVDKRVFQSFDG 149
+K I+I A+SA++ + ++ ++ + + RP ++ Q F+
Sbjct: 1479 QIEKQIRIVALSASLTDARDVAQWLGCNPNATFNFHPSVRPIPLELHI-------QGFN- 1530
Query: 150 KSLTEIYADNLDYSLTGSGP--DAVLHLVQGNLMVLIFCSSKIACSNLALR--------L 199
N T S P +A+L + V++F SS+ A+ L
Sbjct: 1531 ------VTHNATRIATMSKPVYNAILKY-SAHKPVIVFVSSRKQARLTAIDILTYAASDL 1583
Query: 200 QFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEE 259
Q +RF E+ED+ L+ D L+E + GVAY H L++ + RL+E+
Sbjct: 1584 QPNRF------FHAEEEDIKPFLERMTD----KTLKETLAQGVAYLHEGLSSSDHRLVEQ 1633
Query: 260 AYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS--YVGRDFISLNMYK-----QMVGRAGR 312
+ +G +Q+ + L G+++ A +II D+ Y G++ S Y QMVGRA R
Sbjct: 1634 LFDSGAVQLAVVSRDLCWGMSISAHLIIIMDTQFYNGKNH-SYEDYPITDVLQMVGRANR 1692
Query: 313 TGLQESGESIMLCK-TMQDFLRFSSMMNAGPEPISSHMD 350
+ +++C+ + +DF F +N P PI SH+D
Sbjct: 1693 PNEDADAKCVLMCQSSKKDF--FKKFINE-PLPIESHLD 1728
>gi|411001520|ref|ZP_11377849.1| DEAD/DEAH box helicase [Streptomyces globisporus C-1027]
Length = 905
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 139/310 (44%), Gaps = 36/310 (11%)
Query: 37 LNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYL 96
+ +++ T EK + + + + E+G +V+DE H+L +P RG +LE ++++V
Sbjct: 228 IRSADVWVATTEKFEAICRAGSLRDALAEVGCLVVDEIHLLGDPTRGAVLEALLARVRED 287
Query: 97 KKSIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIY 156
+I +SAT+ N ++ ++ RPT+ + + + V
Sbjct: 288 SAGTRIVGLSATVANAEEVARWLGARLVRTTWRPTRLTWQLPLLDPV------------- 334
Query: 157 ADNLDYSL-----TGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRLQFDRFPGTKEYK 211
D D++ TG+ + G VL+FC SK + AL L DR T
Sbjct: 335 -DETDWAARAAVRTGAAVRIARQVTDGGGSVLVFCGSKRRVRSTALALAADRGVSTVGVD 393
Query: 212 KQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICC 271
+ E +E L C GV H+ D +R E+A+ A ++
Sbjct: 394 ADDAE-AVERL--------------CTGAGVRLHYRDWP--YKREAEQAFRAREADVLVA 436
Query: 272 TSTLAAGVNLPAQRVIIRDSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDF 331
TST+AAGVNLPA+ VI+ D+ +G D + ++M +QM GRAGR G E L +
Sbjct: 437 TSTVAAGVNLPARAVIVSDTTLGMDRVEVSMVQQMFGRAGRIGAGEREGWAFLLTDPAER 496
Query: 332 LRFSSMMNAG 341
+ + + AG
Sbjct: 497 AHWQARLAAG 506
>gi|424812630|ref|ZP_18237870.1| superfamily II helicase [Candidatus Nanosalinarum sp. J07AB56]
gi|339756852|gb|EGQ40435.1| superfamily II helicase [Candidatus Nanosalinarum sp. J07AB56]
Length = 749
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 122/442 (27%), Positives = 190/442 (42%), Gaps = 67/442 (15%)
Query: 10 AKAAEEFKFYLEEYAGVK-----GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQEN--R 62
A A+E+++ + E Y + G Y ++ + I T EK + SL++ +
Sbjct: 79 ALASEKYEDFSERYTNLDVRMAVGDYDSGGENMDAADVLIATSEK----LDSLLRHSPSW 134
Query: 63 IDEIGLIVIDEFHMLNEPQRGPILECVVSKV-----LYLKKSIQIFAMSATIGNINALST 117
I I L+V+DE H+LN P RGP LE ++K+ L S++ G + T
Sbjct: 135 ISRIDLVVVDEIHLLNSPNRGPTLEVTITKLRDTLNFQLPWSLRHHIERLRDGGLARRGT 194
Query: 118 FIEGITYVENS------------RPTKHSEYVTVDKRVFQSFDGKS-LTEIYADNLDYSL 164
E + RP + + +R SF S E + L
Sbjct: 195 CRERLPPGGTGTGCGARRGLGVLRPGRA---LPEQRRRDSSFSKASDHEEGIEPEREVEL 251
Query: 165 TGSGPDAVLHLVQGNL----MVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIE 220
G + + +V+ L ++F SS+ + DR E E+E
Sbjct: 252 AGQSRETPVRIVEDTLDREKQAIVFTSSRKGAEKSS-----DRNADVVEDSLSEQE---- 302
Query: 221 ALKEENDG-------KLSTNLEEC------ILYGVAYHHADLTAGERRLIEEAYLAGTLQ 267
KEE DG L + +C + G A+HHA L +R+++EEA+ G ++
Sbjct: 303 --KEELDGYADRILSALGSPTSQCRRLAENLRRGAAFHHAGLVTSQRQVVEEAFRKGLVK 360
Query: 268 IICCTSTLAAGVNLPAQRVIIRD----SYVGRDFISLNMYKQMVGRAGRTGLQESGESIM 323
+ T TLAAGVNLPA RV+IRD + G DFI + Y+QM GRAGR G + GE+I
Sbjct: 361 TVSATPTLAAGVNLPAFRVVIRDLKRYTGSGMDFIPVLEYEQMTGRAGRPGFDDRGEAIS 420
Query: 324 LCKTMQDFLRFSSMMNAG-PEPISSHMDP-PTLVDLILEVVAANLCSSLEDVKTLIKHTL 381
+ K AG PE I S + P L L +VA+ S E++ + T
Sbjct: 421 VAKNPGMTGEIVDRYIAGEPEKIRSKLAAEPVLRMHTLSLVASKYTRSREELLEFFEGTF 480
Query: 382 F-YQLKSPEDQQTFLETTLSEI 402
+ +Q + + L +T+ E+
Sbjct: 481 YAHQFGDFSEIERKLSSTIEEL 502
>gi|239986367|ref|ZP_04707031.1| DEAD/DEAH box helicase domain-containing protein [Streptomyces
roseosporus NRRL 11379]
Length = 958
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 139/310 (44%), Gaps = 36/310 (11%)
Query: 37 LNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYL 96
+ +++ T EK + + + + E+G +V+DE H+L +P RG +LE ++++V
Sbjct: 280 IRSADVWVATTEKFEAICRAGSLRDSLAEVGCLVVDEIHLLGDPTRGAVLEALLARVRED 339
Query: 97 KKSIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIY 156
+I +SAT+ N ++ ++ RPT+ + + + V
Sbjct: 340 SAGTRIVGLSATVANAEEVARWLGARLVRTTWRPTRLTWQLPLLDPV------------- 386
Query: 157 ADNLDYSL-----TGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRLQFDRFPGTKEYK 211
D D++ TG+ + G VL+FC SK + AL L DR T
Sbjct: 387 -DETDWAARAAVRTGTAVRIARQVTDGGGSVLVFCGSKRRVRSTALALAADRGVSTVGVD 445
Query: 212 KQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICC 271
+ E +E L C GV H+ D +R E+A+ A ++
Sbjct: 446 ADDAE-TVERL--------------CTRAGVRLHYRDWP--YKREAEQAFRAREADVLVA 488
Query: 272 TSTLAAGVNLPAQRVIIRDSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDF 331
TST+AAGVNLPA+ VI+ D+ +G D + ++M +QM GRAGR G E L +
Sbjct: 489 TSTVAAGVNLPARAVIVSDTTLGMDRVEVSMVQQMFGRAGRIGAGEREGWAFLLTDPAER 548
Query: 332 LRFSSMMNAG 341
+ + + AG
Sbjct: 549 AHWQARLAAG 558
>gi|255729018|ref|XP_002549434.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240132503|gb|EER32060.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 817
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 109/376 (28%), Positives = 189/376 (50%), Gaps = 50/376 (13%)
Query: 33 TKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSK 92
+K+Q+ + I + T EK I + + + + LI+IDE H+L++ +RGP+LE +VS+
Sbjct: 454 SKQQILETQIIVTTPEKWD--IITRKDPSYVKLVKLIIIDEIHLLHD-ERGPVLESIVSR 510
Query: 93 VLYLKKSIQIFAMSATIGNINALSTFI----EGITYVENS-RPTK-HSEYVTVDKRVFQS 146
+ ++I +SAT+ N ++ FI EG+ Y + + RP E+V V ++
Sbjct: 511 TVRRSDEVRIVGLSATLPNYRDVAKFIQVPVEGLFYFDATFRPCPLQQEFVGVKEK---- 566
Query: 147 FDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSK----IACSNLALRLQFD 202
K++ ++ A N + D + ++ +++F S+ L+ +L D
Sbjct: 567 ---KAIKKVAAMN------EACYDRMYKSLKDGHQLIVFVHSRNETFTTAKYLSEKLDMD 617
Query: 203 --RFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEA 260
GTKE KQE E + A L+E I +G HHA L+ +R +E+
Sbjct: 618 IVEHEGTKEVLKQEGESMKNA-----------KLKEIISHGFGIHHAGLSKSDRSTVEDL 666
Query: 261 YLAGTLQIICCTSTLAAGVNLPAQRVIIR--DSYVGRDFISLNMYK----QMVGRAGRTG 314
+ G L+++ T+TLA GVNLPA VII+ ++Y + + QM+GRAGR
Sbjct: 667 FAQGHLRVLVSTATLAWGVNLPAHTVIIKGTETYSPETGTWVQLSPQDILQMLGRAGRPR 726
Query: 315 LQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAANLCSSLEDVK 374
++GE I++ T QD +++ + PI S M + ++ EVVA ++ S E ++
Sbjct: 727 YDKNGEGIII--TSQDEIQYYLAILNQQLPIESQMVHKLVDNVNAEVVAGSITSIEEGIE 784
Query: 375 TLIKHTLFY--QLKSP 388
L +T F+ L+SP
Sbjct: 785 WL-GYTYFFVRMLQSP 799
>gi|367039613|ref|XP_003650187.1| hypothetical protein THITE_2141865 [Thielavia terrestris NRRL 8126]
gi|346997448|gb|AEO63851.1| hypothetical protein THITE_2141865 [Thielavia terrestris NRRL 8126]
Length = 1377
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 94/305 (30%), Positives = 149/305 (48%), Gaps = 30/305 (9%)
Query: 35 RQLNKKSIYICTIEKGSKLIGSLIQENRIDEI-GLIVIDEFHMLNEPQRGPILECVVSKV 93
R++ SI + T EK + R+ ++ L +IDE H+L + RG LE VVS++
Sbjct: 186 RRVGDASIIVTTPEKWDSITRKWHDHRRLLQVVELFLIDEVHILKD-ARGATLEAVVSRM 244
Query: 94 LYLKKSIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEY------VTVDKRVFQSF 147
+ +++ A+SAT+ N ++ ++ G + P + V + K V+ F
Sbjct: 245 KTIGANVRFLALSATVPNSEDIARWL-GRNHTNQQLPAHREAFGEEFRPVKLQKFVY-GF 302
Query: 148 DGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRLQFDRFPGT 207
+ S I+ LD L G H Q +L+FC ++ +C + A L
Sbjct: 303 ESNSNDFIFDRFLDQKLPGL---IARHTRQK--PILVFCFTRKSCESTASLL-------- 349
Query: 208 KEYKKQEKE-DLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTL 266
E+ + D + + + LS L+E + +GVA+HHA L A +R IE+ +L G L
Sbjct: 350 AEFASGRPDGDRLWPVPSQRVPVLSRELQEIVKFGVAFHHAGLDAQDRTAIEQNFLKGQL 409
Query: 267 QIICCTSTLAAGVNLPAQRVIIRDSYVGRDFISLNMYK-----QMVGRAGRTGLQESGES 321
+ICCTSTLA GVNLP VI++ + VG L Y QM+GRAGR +S +
Sbjct: 410 GVICCTSTLAVGVNLPCHTVILKGT-VGFSDERLEEYSDLEVMQMLGRAGRPQFDDSATA 468
Query: 322 IMLCK 326
I+L +
Sbjct: 469 IVLTR 473
>gi|149245148|ref|XP_001527108.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|146449502|gb|EDK43758.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 1196
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 104/347 (29%), Positives = 169/347 (48%), Gaps = 58/347 (16%)
Query: 66 IGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFI------ 119
+ L+++DE H+L E RG LE V++++ + + ++I A+SAT+ N +S +I
Sbjct: 127 VKLLLVDEVHILKE-TRGSTLEVVITRMKRICEGMRILAISATVANAYDISKWIGLGGND 185
Query: 120 --------EGITYVENSRPTKH--SEYVTVDKRVFQ-SFDGKSLTEIYADNLDYSLTGSG 168
+ +T + N+ T + EY V F F +S + D L S
Sbjct: 186 DSTACGEFDQLTRLANTAVTFNFGEEYRAVKLEQFVCGFKPQSENDFSFD----VLLNSK 241
Query: 169 PDAVLHLVQGNLMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDG 228
+ +++ N VLIFC ++ +C A L KE+L L N+
Sbjct: 242 LNEIINKYSRNKPVLIFCPTRNSCQQTAKYL---------------KENLNIKLSYSNEL 286
Query: 229 KL-STNLEECI-LYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRV 286
KL +L+ C+ +G+ YHHA L +R +E ++L G ++I+CCTSTLA G+NLPA V
Sbjct: 287 KLKDRDLQACVNKFGIGYHHAGLALADRNQVETSFLNGRIKILCCTSTLAVGINLPAYLV 346
Query: 287 IIRDSYVGRDFISLNMYK--------QMVGRAGRTGLQESGESIML--CKTMQDFLRFSS 336
II+ G S N +K QM+GRAGR + G ++++ K Q ++
Sbjct: 347 IIK----GTRCWSENRFKEYQETDILQMIGRAGRPQFENKGVAVVMTNAKLKQ---KYEK 399
Query: 337 MMNAGPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFY 383
++N G E + S + +L+ E+ N+ SL+D IK T FY
Sbjct: 400 VIN-GTEKVESSLHLSFPENLVSEIAIGNV-RSLKDALNWIKTTYFY 444
>gi|449298929|gb|EMC94943.1| hypothetical protein BAUCODRAFT_72059 [Baudoinia compniacensis UAMH
10762]
Length = 2207
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 122/491 (24%), Positives = 232/491 (47%), Gaps = 75/491 (15%)
Query: 22 EYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQ 81
+ A + G TK+Q+ + ++ + T EK + + + + LI IDE H+L++
Sbjct: 614 QVAELTGDRQLTKQQIAETNVIVTTPEKWDVITRKATDTSYTNLVRLICIDEIHLLHD-D 672
Query: 82 RGPILECVVSKVLYLKK----SIQIFAMSATIGNINALSTFI-----EGITYVENS-RPT 131
RGP+LE +VS+ + ++ +++I +SAT+ N ++TF+ +G+ + + S RP
Sbjct: 673 RGPVLESIVSRTIRRQEQTGNAVRIVGLSATLPNYRDVATFLRVDQQKGLFHFDGSYRPC 732
Query: 132 K-HSEYVTV-DKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSK 189
E++ V DK+ + K++ E+ + + + + Q +LIF S+
Sbjct: 733 PLKQEFIGVTDKKAIKQL--KTMNEVCYNKV-----------LEQVGQNKQQMLIFVHSR 779
Query: 190 IACSNLA--LR---LQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAY 244
+ A +R L+ D + E L+EE++ + +L++ + YG
Sbjct: 780 KETAKTAKFIRDKALEMDTIGQILRVDAASR----EILREESEQVTNADLKDVLPYGFGI 835
Query: 245 HHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYV----GRDFISL 300
HHA ++ +R +E+ + G++Q++ CT+TLA GVNLPA VII+ + + ++ L
Sbjct: 836 HHAGMSRADRTTVEDLFQDGSIQVLVCTATLAWGVNLPAHTVIIKGTQIYSPEKGSWVEL 895
Query: 301 NMYK--QMVGRAGRTGLQESGESIMLCKT--MQDFLRFSSMMNAGPEPISSHMDPPTLVD 356
+ QM+GRAGR GE I++ MQ +L S+MN PI S + +
Sbjct: 896 SPQDVLQMLGRAGRPQYDTYGEGIIITNQAEMQYYL---SLMNQQ-LPIESQLVSKLADN 951
Query: 357 LILEVVAANLCSSLEDVKTL---------IKHTLFYQLKSPEDQQTFLETTLSEIV--AS 405
L E+V N+ + E V L ++ YQ+ + ++ LE +++ A+
Sbjct: 952 LNAEIVLGNVRTRDEGVDWLGYTYLFVRMLRSPALYQVGADYEEDETLEQKRVDLIHSAA 1011
Query: 406 LLASKGTMLTMN-EAGHLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHML 464
L+ K ++ + + G + T + + A ++H N L +LH+
Sbjct: 1012 LVLEKAQLVKYDKKTGRMQSTDLGRIASHYYITH---------------NSMLTYNLHIQ 1056
Query: 465 FLVIPLE-YRI 474
V P+E +R+
Sbjct: 1057 PSVTPIELFRV 1067
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 83/403 (20%), Positives = 170/403 (42%), Gaps = 54/403 (13%)
Query: 3 HEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENR 62
H++ ++LA + K E A +K L + + + T + + +
Sbjct: 1446 HDRLRNLAGGKQIVKLTGETTADLK--------LLEQGDLILATPVQWDMMSRQWQRRKN 1497
Query: 63 IDEIGLIVIDEFHMLNEPQRGPILECVVSK----VLYLKKSIQIFAMSATIGNINALSTF 118
+ + LI+ D+ HML Q G I E VVS+ L+ ++I +S ++ N + +
Sbjct: 1498 VQNVKLIIADDLHMLGG-QGGYIFEAVVSRSQAIAAQLENGLRIIGLSVSLSNARDIGEW 1556
Query: 119 IEGITY-VENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQ 177
I + + N P H + ++ + Q+F+ + +L ++T A+L
Sbjct: 1557 IGASKHTIYNFSP--HVRPIPLNLHL-QTFNIP-----HYPSLMLAMTKPAYQAILQYAP 1608
Query: 178 GNLMVLIFCSSKIACSNLALRL--------QFDRFPGTKEYKKQEKEDLIEALKEENDGK 229
+ ++F S+ + A L DRF + ++ E ++ +KE +
Sbjct: 1609 -DKPAMVFLPSRKQVRSTAQDLLAACVADDDEDRF---LQADSEQLEPVLGKVKERS--- 1661
Query: 230 LSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIR 289
L E + +G+AY+H L+ ++R++E + G +Q++ + V A VI+
Sbjct: 1662 ----LAESLGHGIAYYHEALSESDKRIVESLFRQGAVQVMLVSRDCCYEVQNVAHLVIVM 1717
Query: 290 DS--YVGRD--FISLNMYK--QMVGRAGRTGLQESGESIMLCKTMQD--FLRFSSMMNAG 341
+ + GR+ +I + + QM G AGR G + +++C ++ + +F S
Sbjct: 1718 GTQFFEGREHRYIDYPISEVLQMFGHAGRPGQDKDCRGVLMCPDVKRNYYRKFLSEAL-- 1775
Query: 342 PEPISSHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQ 384
PI S + + D + ++ S +D +T FY+
Sbjct: 1776 --PIESQLQ-SYMHDAFVTEISTKTIESTQDAVDWTTYTYFYR 1815
>gi|328715038|ref|XP_003245515.1| PREDICTED: putative U5 small nuclear ribonucleoprotein 200 kDa
helicase-like isoform 2 [Acyrthosiphon pisum]
Length = 2148
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 120/490 (24%), Positives = 232/490 (47%), Gaps = 62/490 (12%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V E S K + + E + G + T+ Q+ I +CT EK + ++
Sbjct: 552 LVQEMVGSFGKRLSSYNLTVSE---LTGDHQLTREQIQATQIIVCTPEKWDIITRKGGEK 608
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLY----LKKSIQIFAMSATIGNINALS 116
+ + LI+IDE H+L++ +RGP+LE +V++ + +++ +++ +SAT+ N ++
Sbjct: 609 TFVSLVRLIIIDEIHLLHD-ERGPVLEALVARTIRNIETIQEDVRLVGLSATLPNYQDVA 667
Query: 117 TFIE-----GITYVENS-RPTK-HSEYVTV-DKRVFQSFDGKSLTEIYADNLDYSLTGSG 168
T + G+ Y +NS RP +Y+ + +K+ + F + + EI + +
Sbjct: 668 TLLRVNPDTGLFYFDNSFRPVPLEQQYIGITEKKAVKRF--QVMNEIVYEKI-------- 717
Query: 169 PDAVLHLVQGNLMVLIFCSSKIACSNLALR---LQFDRFPGTKEYKKQEKEDLIEALKEE 225
+ H + ++V + + + A+R L+ D T +E +E L+ E
Sbjct: 718 ---MEHAGRNQILVFVHSRKETGKTARAIRDMCLEKD----TLGQFLREGSASMEVLRTE 770
Query: 226 NDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQR 285
+ + L + + YG A HHA +T +R L+E+ + +Q++ T+TLA GVNLPA
Sbjct: 771 AEQVKNQELRDLLPYGFAIHHAGMTRVDRTLVEDLFADRHIQVLISTATLAWGVNLPAHT 830
Query: 286 VIIRDSYV-----GRDFISLNMYK--QMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMM 338
VII+ + V GR ++ L QM+GRAGR GE I++ + + S++
Sbjct: 831 VIIKGTQVYSPEKGR-WVELGALDVLQMLGRAGRPQYDTKGEGILIT-NHSELQYYLSLL 888
Query: 339 NAGPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFY--QLKSPE------- 389
N PI S M L D++ + S+++ T + ++ Y L+SP
Sbjct: 889 NQQL-PIESQM-VSKLPDMLNAEIVLGTIQSVKEAVTWLGYSYLYIRMLRSPALYTITPE 946
Query: 390 --DQQTFLETTLSEIV--ASLLASKGTMLTMN-EAGHLSLTSIAKAAVQAGLSHDVCLII 444
+ LET ++I+ A++ + ++ + ++G+ +T + + A +HD +
Sbjct: 947 KLEVDPLLETHRADIIHTAAIQLERSNLIKYDRKSGYFQVTELGRIASHYYCTHD-TMAT 1005
Query: 445 YSDLLHNKLN 454
Y+ LL L+
Sbjct: 1006 YNQLLKPTLS 1015
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 84/340 (24%), Positives = 155/340 (45%), Gaps = 55/340 (16%)
Query: 37 LNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYL 96
L K I + T EK L Q + I L ++DE ++ + GP+LE V S++ Y+
Sbjct: 1424 LAKGQIIVTTAEKWDVLSRRWKQRKNVQNINLFIVDELQLIG-GEDGPVLEIVCSRMRYI 1482
Query: 97 ----KKSIQIFAMSATIGNINALSTFIEG-ITYVENSRPTKHSEYVTVDKRVFQ-SFDGK 150
+K +++ A+SA + + L+ ++ T N P+ + + + + + +
Sbjct: 1483 ASQTEKQMRVVALSAPLADARDLALWLGAPATTTFNFHPSVRPVPLELHVQGYNVTHNAT 1542
Query: 151 SLTEI----YADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRL------- 199
L + Y L YSL V+IF S+ A+ L
Sbjct: 1543 RLVAMGKPTYNAILKYSLEKP--------------VIIFVPSRKQARLTAIDLLTYTAAD 1588
Query: 200 -QFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIE 258
Q +RF +ED I+ E+ K L+E +L GVAY H +++ ++R ++
Sbjct: 1589 NQSNRF-------IHAEEDDIKPFVEKISDK---TLKETLLQGVAYLHEGVSSQDQRWVQ 1638
Query: 259 EAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS--YVGR-----DFISLNMYKQMVGRAG 311
+ + G +Q++ T +L +++ + VII D+ Y G+ D+ ++ QMVGRA
Sbjct: 1639 QLFFTGAIQVVVVTRSLCWALSITSHLVIIMDTQFYDGKTHAYEDYPITDVI-QMVGRAN 1697
Query: 312 RTGLQESGESIMLCK-TMQDFLRFSSMMNAGPEPISSHMD 350
R + + +++C+ + +DF F +N P P+ SH+D
Sbjct: 1698 RPLDDDDSKCVLMCQSSKKDF--FKKFLNE-PLPVESHLD 1734
>gi|195019196|ref|XP_001984930.1| GH16760 [Drosophila grimshawi]
gi|193898412|gb|EDV97278.1| GH16760 [Drosophila grimshawi]
Length = 2142
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 119/466 (25%), Positives = 216/466 (46%), Gaps = 65/466 (13%)
Query: 28 GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILE 87
G + T+ Q+ + +CT EK + + + + L++IDE H+L++ +RGP+LE
Sbjct: 571 GDHQLTREQIAATQVIVCTPEKWDIITRKGGERTFVSLVRLVIIDEIHLLHD-ERGPVLE 629
Query: 88 CVVSKVLY----LKKSIQIFAMSATIGNINALSTFI-----EGITYVENS-RPTK-HSEY 136
+V++ + ++ +++ +SAT+ N ++TF+ +G+ Y +NS RP +Y
Sbjct: 630 ALVARTIRNIETTQEDVRLVGLSATLPNYQDVATFLRVKPDKGLFYFDNSYRPVALEQQY 689
Query: 137 VTV-DKRVFQSFDGKSLTEI-YADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSN 194
+ V +K+ + F + + EI Y ++++ G VL+F S+
Sbjct: 690 IGVTEKKALKRF--QVMNEIVYEKTMEHA--------------GRNQVLVFVHSRKETGK 733
Query: 195 LA-----LRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADL 249
A + L+ D +E +E L+ E + + L+E + YG A HHA +
Sbjct: 734 TARAVRDMCLEQDTLGSFL----REGSASMEVLRTEAEQVKNAELKELLPYGFAIHHAGM 789
Query: 250 TAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYV-----GRDFISLNMYK 304
T +R L+E+ + +Q++ T+TLA GVNLPA VII+ + V GR ++ L+
Sbjct: 790 TRVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQVYNPEKGR-WVELSALD 848
Query: 305 --QMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVV 362
QM+GRAGR GE I++ T L+F + PI S L D++ +
Sbjct: 849 VLQMLGRAGRPQYDTKGEGILI--TNHSELQFYLSLLNQQLPIESQF-VSKLPDMLNAEI 905
Query: 363 AANLCSSLEDVKTLIKHTLFY--QLKSPE---------DQQTFLETTLSEIV---ASLLA 408
L+D + +T Y L++P LE ++++ A L
Sbjct: 906 VLGTVQHLQDAVNWLGYTYLYIRMLRNPTLYGVSHDAIKADPLLEQHRADLLHTAACCLE 965
Query: 409 SKGTMLTMNEAGHLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLN 454
G + + GH +T + + A L+H+ ++ Y+ LL L+
Sbjct: 966 RSGLIKYERKTGHFQVTDLGRIASHYYLTHE-TMLTYNQLLKQTLS 1010
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 88/339 (25%), Positives = 156/339 (46%), Gaps = 57/339 (16%)
Query: 39 KKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYL-- 96
K + I T +K L Q + +I L ++DE ++ + GP++E V S++ Y+
Sbjct: 1420 KGQLVITTADKWDVLSRRWKQRKNVQQINLFIVDELQLVG-GEEGPVMEIVCSRMRYISS 1478
Query: 97 --KKSIQIFAMSATIGNINALSTFI-----EGITYVENSRPTKHSEYVTVDKRVFQSFDG 149
+K I+I A+SA++ + ++ ++ + + RP ++ Q F+
Sbjct: 1479 QIEKQIRIVALSASLTDARDVAQWLGCNPNATFNFHPSVRPIPLELHI-------QGFN- 1530
Query: 150 KSLTEIYADNLDYSLTGSGP--DAVLHLVQGNLMVLIFCSSKIACSNLALR--------L 199
N T S P +A+L + V++F SS+ +A+ L
Sbjct: 1531 ------VTHNATRIATMSKPVYNAILKY-SPHKPVIVFVSSRKQARLMAIDVLTYAASDL 1583
Query: 200 QFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEE 259
Q +RF +ED I+ E K L+E + GVAY H L+A + RL+E+
Sbjct: 1584 QPNRF-------FHAEEDDIQPFLERMSDK---TLKETLAQGVAYLHEGLSASDHRLVEQ 1633
Query: 260 AYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS--YVGRDFISLNMYK-----QMVGRAGR 312
+ +G +Q+ + L+ G+++ A VII D+ Y G++ S Y QM+GRA R
Sbjct: 1634 LFDSGAVQLAVVSRDLSWGMSISAHLVIIMDTQFYNGKNH-SYEDYPITDVLQMIGRANR 1692
Query: 313 TGLQESGESIMLCK-TMQDFLRFSSMMNAGPEPISSHMD 350
+ +++C+ + +DF F +N P PI SH+D
Sbjct: 1693 PNEDADAKCVLMCQSSKKDF--FKKFINE-PLPIESHLD 1728
>gi|358057275|dbj|GAA96884.1| hypothetical protein E5Q_03557 [Mixia osmundae IAM 14324]
Length = 2188
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 130/468 (27%), Positives = 216/468 (46%), Gaps = 61/468 (13%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V E S K E F + E G + TK+Q+ I + T EK +
Sbjct: 583 LVQEMVGSFGKRLEPFGIQVSELTGDRQL---TKQQIAATQIIVTTPEKWDVITRKSTDT 639
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQ----IFAMSATIGNINALS 116
+ + + LI+IDE H+L++ RGP+LE +V++ + + Q + +SAT+ N + ++
Sbjct: 640 SYTNLVRLIIIDEIHLLHD-DRGPVLESIVARTIRRMEQTQDYVRLVGLSATLPNYHDVA 698
Query: 117 TFI-----EGITYVENS-RPTK-HSEYVTV-DKRVFQSFDGKSLTEIYADNLDYSLTGSG 168
F+ +G+ Y + + RP ++V V +KR + + + E+ +
Sbjct: 699 RFLRVNPNKGLFYFDATYRPCPLRQQFVGVTEKRAIMRY--QVMNEVCYEK--------- 747
Query: 169 PDAVLHLVQGNLMVLIFCSSKIACSNLALRLQ---FDRFPGTKEYKKQEKEDLIEALKEE 225
VL Q L+F S+ + A L+ +R T + E L+ L+EE
Sbjct: 748 ---VLEQAQAGNQTLVFVHSRKETAKTAKALRDAAVERETITAFIQSGGGERLV--LEEE 802
Query: 226 NDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQR 285
NL++ + YG+A HHA + +R +EE + L+++ CT+TLA GVNLPA
Sbjct: 803 ASKASDPNLKDLLPYGIAIHHAGMNRIDRGTVEELFAEKRLKVLVCTATLAWGVNLPAHC 862
Query: 286 VIIRDSYV-----GRDFISLNMYK--QMVGRAGRTGLQESGESIMLCKTMQDFLR-FSSM 337
V+I+ + + GR ++ L+ QM+GRAGR + GES+++ T QD L+ F SM
Sbjct: 863 VVIKGTQIYNPEKGR-WVELSPQDTLQMLGRAGRPQYDKYGESVVI--TNQDQLQYFLSM 919
Query: 338 MNAGPEPISSHMDPPTLVD-LILEVVAANLCSSLEDVKTLIKHTLFYQ-LKSP------- 388
+N PI S P L D L E+V + + E V L LF + L SP
Sbjct: 920 LNQQ-LPIESQFQGPKLADNLNAELVLGTIRNRDEGVAWLGYTYLFTRMLGSPALYGVPA 978
Query: 389 ---EDQQTFLE--TTLSEIVASLLASKGTMLTMNEAGHLSLTSIAKAA 431
ED + ++ L A+ L G + ++G + I + A
Sbjct: 979 DYEEDDPSLIQYRADLIHTAAASLERAGMLRYDRKSGEMFTNDIGRVA 1026
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 107/501 (21%), Positives = 208/501 (41%), Gaps = 67/501 (13%)
Query: 24 AGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRG 83
A + G+ R L++ + ICT + L Q + +I L++ DE H++ + G
Sbjct: 1445 AALTGETSTDLRILSESDLVICTPTQWDLLSRRWKQRKNVQQIALLIADELHLIGS-EIG 1503
Query: 84 PILECVVSKVLYL----KKSIQIFAMSATIGNINALSTFIEG-----ITYVENSRPTKHS 134
P E VVS+ + + +I A++GN L ++ + +RP
Sbjct: 1504 PTYEIVVSRTRLIGAQTEHKTRIIGFGASLGNARDLGEWMGANSQTIFNFSPGARPLPLQ 1563
Query: 135 EYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSN 194
++ QSF+ +L + A++ + V+ F S+ C
Sbjct: 1564 VHL-------QSFNVPHFP-----SLMLQMAKPAYLAIIEWAEAR-PVIAFVPSRKQCKL 1610
Query: 195 LALRL--------QFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHH 246
A L +RF E E +E + +E+ L++ + +G+ ++H
Sbjct: 1611 TATDLLTYCLADEDQNRFLNAD---VTELESTLELISDED-------LKDTLRHGIGFYH 1660
Query: 247 ADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIR--DSYVGRD--FISLNM 302
L+ +R+++E+ Y G +Q+I + A + + A V++ ++ G++ +I
Sbjct: 1661 EGLSKRDRKIVEQLYGLGAIQVIVASKDTAWSIPMKAHMVVLMGVQTFEGKEHRYIDYPF 1720
Query: 303 YK--QMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILE 360
QM+GRA R S +++C ++ F ++N G PI SH+ L E
Sbjct: 1721 ADVLQMMGRACRPAEDTSSRCVLMCPQVRKEF-FKKVLNEG-LPIESHLHLSLADHLNAE 1778
Query: 361 VVAANLCSSLEDVKTLIKHTLFYQLKSPED-------QQTFLETTLSEIVASLLA--SKG 411
+V + + E + L ++ +L + + + LSE+V S ++ S
Sbjct: 1779 IVTKTVENKQEALDYLTWTYMYRRLAANANYYNLQGVSHRHISDHLSELVESTVSELSAS 1838
Query: 412 TMLTMNEAGHLSLTSIAKAAVQAGLSHDVCLIIYSDLL--HNKLNFCL-LNSLHMLFLVI 468
L +++ LS ++ A + H + + I+S L KL L + S F +
Sbjct: 1839 KCLQVDDDMDLSALNLGMIAAYYNVRH-ITIDIFSLSLTERTKLKGLLEIVSSAAEFEDV 1897
Query: 469 PLEYRIPSDGILLSRSKVYDR 489
P+ +R + +LL K+YDR
Sbjct: 1898 PIRHR---EDLLL--QKIYDR 1913
>gi|392862855|gb|EAS36471.2| DEAD/DEAH box DNA helicase [Coccidioides immitis RS]
Length = 1487
Score = 119 bits (298), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 103/373 (27%), Positives = 168/373 (45%), Gaps = 55/373 (14%)
Query: 35 RQLNKKSIYICTIEKGSKLIGSLIQENRIDE-IGLIVIDEFHMLNEPQRGPILECVVSKV 93
R + SI I T EK + R+ + I L +IDE H+L E RG LE VVS++
Sbjct: 319 RNVQNASIIITTPEKWDSMTRKWKDHMRLMQLIKLFLIDEVHILKE-TRGATLEVVVSRM 377
Query: 94 LYLKKSIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSFDGKSLT 153
S++ A+SAT+ N ++T++ G P H + G+
Sbjct: 378 KSANSSVRFIALSATVPNSEDIATWL-GRDPTNQHLPAHHERF------------GEEFR 424
Query: 154 EIYADNLDYSLTGSGPDAVLHLVQGNLM------------VLIFCSSK---IACS-NLAL 197
+ Y +G D V V + + ++IFC ++ I+ S NLA
Sbjct: 425 PVKLQKFVYGYQSNGNDFVFEKVCDSKLPEVISKHSRRKPIMIFCCTRHSAISTSKNLAK 484
Query: 198 RLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLI 257
PG + + +K +++ + +L+ + GVA+HHA L +R +
Sbjct: 485 LWTATNAPG-RLWNSPKKPIIVQ----------NQDLKATLSTGVAFHHAGLDTSDRHAV 533
Query: 258 EEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS-----YVGRDFISLNMYKQMVGRAGR 312
E AYL G + +ICCTSTLA G+NLP VII+++ + R++ L M QM+GRAGR
Sbjct: 534 EMAYLQGHISVICCTSTLAVGINLPCHLVIIKNTVSWQDHHRREYTDLEMM-QMLGRAGR 592
Query: 313 TGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISS--HMDPPTLVDLILEVVAANLCSSL 370
S +++L K ++ + + G EP+ S H + L+D + V + +
Sbjct: 593 PQFDNSATAVILTK--KERVDHYQKLVTGSEPLESCLHFN---LIDHLNAEVGLGTVTDI 647
Query: 371 EDVKTLIKHTLFY 383
E + T F+
Sbjct: 648 ESATMWLAGTFFF 660
>gi|448516971|ref|XP_003867681.1| Hfm1 protein [Candida orthopsilosis Co 90-125]
gi|380352020|emb|CCG22244.1| Hfm1 protein [Candida orthopsilosis]
Length = 1131
Score = 119 bits (298), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 99/330 (30%), Positives = 163/330 (49%), Gaps = 50/330 (15%)
Query: 66 IGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYV 125
+ L+++DE H+L EP RG LE V++++ + ++I A+SAT+ N + +ST+++ T +
Sbjct: 247 VKLLLVDEVHVLKEP-RGATLEVVMTRMKRICVGLRILAISATVANAHDISTWLDAETLI 305
Query: 126 ENSRPTKHSEYVTVD-KRVFQSFDGKSLTEIYADN-LDYSLTGSGPDAVLHLVQGNLMVL 183
EY V +++ + + + DN L+ L V+ VL
Sbjct: 306 FGE------EYRAVKLQKIVYGYKPNNENDFSFDNQLNSKLV-----EVIEKHSTGKPVL 354
Query: 184 IFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVA 243
IFC+++ +C A +F K K ++ LK+ L + GV
Sbjct: 355 IFCATRNSCQFTA------KFLAEKICAK----GVVLKLKDRE-------LANLMKTGVG 397
Query: 244 YHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS----------YV 293
YHHA LT +R+LIE A+L G L +CCTSTLA G+NLPA VII+ + Y
Sbjct: 398 YHHAGLTYADRKLIEAAFLNGDLGYLCCTSTLAVGINLPAYLVIIKGTRCWCESTFQEYS 457
Query: 294 GRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPT 353
D + QM+GRAGR + G SI++ + L++ ++ G E + S +
Sbjct: 458 ETDIL------QMIGRAGRPQFENEGVSIIMTNSKLK-LKYERLI-MGTEKVESSLHLNF 509
Query: 354 LVDLILEVVAANLCSSLEDVKTLIKHTLFY 383
+L+ E+ N+ SS++D + +K T FY
Sbjct: 510 SENLLAEIAVGNI-SSIDDALSWLKTTYFY 538
>gi|304314962|ref|YP_003850109.1| helicase [Methanothermobacter marburgensis str. Marburg]
gi|302588421|gb|ADL58796.1| predicted helicase [Methanothermobacter marburgensis str. Marburg]
Length = 693
Score = 119 bits (298), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 99/351 (28%), Positives = 167/351 (47%), Gaps = 54/351 (15%)
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIE 120
N + EI L+++DEFHM+ E RGP++E +++ L +++I A+SAT+ N++ + ++
Sbjct: 122 NTLREIDLLIVDEFHMIGEYSRGPVIESAITRARKLNPAMRIVALSATLSNMDEIGEWLG 181
Query: 121 GITYVENSRPTK-HSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGN 179
+ RP H E +D +F + D + VL +++ +
Sbjct: 182 ARIVEHDYRPVPLHRE--VLDTEMFGARDKNQV-------------------VLKILERS 220
Query: 180 L----MVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKE---------EN 226
+ L F S++ +LA L DR KK+ DL+E E
Sbjct: 221 ISEDSQTLAFVSTRRFTESLASYLA-DRI------KKKIPGDLLERFDEVAERILDVPRA 273
Query: 227 DGKLSTN----LEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLP 282
G T+ L +CI GVA+HHA L +R +IE+ + G + +I T +L GVNLP
Sbjct: 274 SGSPPTSTCLKLADCIRAGVAFHHAGLFNRQREIIEDEFRRGNILMITATPSLMYGVNLP 333
Query: 283 AQRVIIRD----SYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSS-M 337
++ V+IRD + G I + Y+QM GRAGR + G S ++ K+ + +
Sbjct: 334 SRTVVIRDYTRWTGQGPQRIPVFDYEQMSGRAGRPLYDDIGYSYLIAKSHDEAMELEEYY 393
Query: 338 MNAGPEPISSHM--DPPTLVDLILEVVAANLCSSLEDVKTLIKHTLF-YQL 385
+N E +S + + L I+ VA+ L S+ ED+ + T + YQ+
Sbjct: 394 VNGEVERTNSRLMENRDALYRQIIAQVASGLASTTEDLLEFFRETFYGYQM 444
>gi|15678832|ref|NP_275949.1| DNA helicase-like protein [Methanothermobacter thermautotrophicus
str. Delta H]
gi|18201992|sp|O26901.1|HELS_METTH RecName: Full=Putative ski2-type helicase
gi|2621900|gb|AAB85310.1| DNA helicase related protein [Methanothermobacter
thermautotrophicus str. Delta H]
Length = 690
Score = 119 bits (298), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 92/352 (26%), Positives = 172/352 (48%), Gaps = 56/352 (15%)
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIE 120
N + E+ L+++DEFHM+ E RGP++E +++ L S++I A+SAT+ N++ ++ +++
Sbjct: 122 NILREVDLLIVDEFHMIGEYTRGPVIESAITRARTLNPSVRIVALSATLSNMDEIAGWLD 181
Query: 121 GITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTG--SGPDAVLHLVQG 178
+ RP ++ + LD + G D VL +++
Sbjct: 182 ARVVEHDYRPVP----------------------LHREVLDTEMFGVREKNDVVLKVLER 219
Query: 179 NL----MVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKE---------E 225
+L L F S++ +LA L D+ G + +D++E+ +E +
Sbjct: 220 SLEDGSQTLAFVSTRRFTESLASHLA-DKISG------KIPDDMVESFREVAGKVLEVPK 272
Query: 226 NDGKLSTN----LEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNL 281
+ G T+ L EC+ G+A+HHA L +R +IE+ + G + +I T +L GVNL
Sbjct: 273 SRGSPPTSTCLKLAECLEAGIAFHHAGLFNRQREIIEDEFRDGNILMITATPSLMYGVNL 332
Query: 282 PAQRVIIRD----SYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSM 337
P++ V+IRD + G I + Y+QM GRAGR ++G S ++ ++ + +
Sbjct: 333 PSRTVVIRDYTRWTSQGPRRIPVFDYEQMSGRAGRPQYDDAGYSYLIARSHDEAMDLEEY 392
Query: 338 MNAGP-EPISSHM--DPPTLVDLILEVVAANLCSSLEDVKTLIKHTLF-YQL 385
G E +S + + L I+ VA+ L + E++ ++T + YQ+
Sbjct: 393 YIRGEVERTTSRIIENRDALYRQIIAQVASGLSGTTEELADFFRNTFYGYQM 444
>gi|328715040|ref|XP_001943598.2| PREDICTED: putative U5 small nuclear ribonucleoprotein 200 kDa
helicase-like isoform 1 [Acyrthosiphon pisum]
Length = 2144
Score = 119 bits (298), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 120/490 (24%), Positives = 232/490 (47%), Gaps = 62/490 (12%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V E S K + + E + G + T+ Q+ I +CT EK + ++
Sbjct: 548 LVQEMVGSFGKRLSSYNLTVSE---LTGDHQLTREQIQATQIIVCTPEKWDIITRKGGEK 604
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLY----LKKSIQIFAMSATIGNINALS 116
+ + LI+IDE H+L++ +RGP+LE +V++ + +++ +++ +SAT+ N ++
Sbjct: 605 TFVSLVRLIIIDEIHLLHD-ERGPVLEALVARTIRNIETIQEDVRLVGLSATLPNYQDVA 663
Query: 117 TFIE-----GITYVENS-RPTK-HSEYVTV-DKRVFQSFDGKSLTEIYADNLDYSLTGSG 168
T + G+ Y +NS RP +Y+ + +K+ + F + + EI + +
Sbjct: 664 TLLRVNPDTGLFYFDNSFRPVPLEQQYIGITEKKAVKRF--QVMNEIVYEKI-------- 713
Query: 169 PDAVLHLVQGNLMVLIFCSSKIACSNLALR---LQFDRFPGTKEYKKQEKEDLIEALKEE 225
+ H + ++V + + + A+R L+ D T +E +E L+ E
Sbjct: 714 ---MEHAGRNQILVFVHSRKETGKTARAIRDMCLEKD----TLGQFLREGSASMEVLRTE 766
Query: 226 NDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQR 285
+ + L + + YG A HHA +T +R L+E+ + +Q++ T+TLA GVNLPA
Sbjct: 767 AEQVKNQELRDLLPYGFAIHHAGMTRVDRTLVEDLFADRHIQVLISTATLAWGVNLPAHT 826
Query: 286 VIIRDSYV-----GRDFISLNMYK--QMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMM 338
VII+ + V GR ++ L QM+GRAGR GE I++ + + S++
Sbjct: 827 VIIKGTQVYSPEKGR-WVELGALDVLQMLGRAGRPQYDTKGEGILIT-NHSELQYYLSLL 884
Query: 339 NAGPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFY--QLKSPE------- 389
N PI S M L D++ + S+++ T + ++ Y L+SP
Sbjct: 885 NQQL-PIESQM-VSKLPDMLNAEIVLGTIQSVKEAVTWLGYSYLYIRMLRSPALYTITPE 942
Query: 390 --DQQTFLETTLSEIV--ASLLASKGTMLTMN-EAGHLSLTSIAKAAVQAGLSHDVCLII 444
+ LET ++I+ A++ + ++ + ++G+ +T + + A +HD +
Sbjct: 943 KLEVDPLLETHRADIIHTAAIQLERSNLIKYDRKSGYFQVTELGRIASHYYCTHD-TMAT 1001
Query: 445 YSDLLHNKLN 454
Y+ LL L+
Sbjct: 1002 YNQLLKPTLS 1011
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 84/340 (24%), Positives = 155/340 (45%), Gaps = 55/340 (16%)
Query: 37 LNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYL 96
L K I + T EK L Q + I L ++DE ++ + GP+LE V S++ Y+
Sbjct: 1420 LAKGQIIVTTAEKWDVLSRRWKQRKNVQNINLFIVDELQLIG-GEDGPVLEIVCSRMRYI 1478
Query: 97 ----KKSIQIFAMSATIGNINALSTFIEG-ITYVENSRPTKHSEYVTVDKRVFQ-SFDGK 150
+K +++ A+SA + + L+ ++ T N P+ + + + + + +
Sbjct: 1479 ASQTEKQMRVVALSAPLADARDLALWLGAPATTTFNFHPSVRPVPLELHVQGYNVTHNAT 1538
Query: 151 SLTEI----YADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRL------- 199
L + Y L YSL V+IF S+ A+ L
Sbjct: 1539 RLVAMGKPTYNAILKYSLEKP--------------VIIFVPSRKQARLTAIDLLTYTAAD 1584
Query: 200 -QFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIE 258
Q +RF +ED I+ E+ K L+E +L GVAY H +++ ++R ++
Sbjct: 1585 NQSNRF-------IHAEEDDIKPFVEKISDK---TLKETLLQGVAYLHEGVSSQDQRWVQ 1634
Query: 259 EAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS--YVGR-----DFISLNMYKQMVGRAG 311
+ + G +Q++ T +L +++ + VII D+ Y G+ D+ ++ QMVGRA
Sbjct: 1635 QLFFTGAIQVVVVTRSLCWALSITSHLVIIMDTQFYDGKTHAYEDYPITDVI-QMVGRAN 1693
Query: 312 RTGLQESGESIMLCK-TMQDFLRFSSMMNAGPEPISSHMD 350
R + + +++C+ + +DF F +N P P+ SH+D
Sbjct: 1694 RPLDDDDSKCVLMCQSSKKDF--FKKFLNE-PLPVESHLD 1730
>gi|326469480|gb|EGD93489.1| DEAD/DEAH box DNA helicase [Trichophyton tonsurans CBS 112818]
Length = 1496
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 99/372 (26%), Positives = 172/372 (46%), Gaps = 53/372 (14%)
Query: 35 RQLNKKSIYICTIEKGSKLIGSLIQENRIDE-IGLIVIDEFHMLNEPQRGPILECVVSKV 93
R + + SI I T EK + ++ + I L++IDE H+L E RG LE VVS++
Sbjct: 324 RNVQQASIIITTPEKWDSMTRKWKDHMKLMQLIKLVLIDEVHILKE-ARGATLEAVVSRM 382
Query: 94 LYLKKSIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSFDGKSLT 153
+ +++ A+SAT+ N ++T++ PT ++++ + F G+
Sbjct: 383 KSVNSNVRFVALSATVPNSEDIATWL-------GKDPT--NQHLPAHRERF----GEEFR 429
Query: 154 EIYADNLDYSLTGSGPD------------AVLHLVQGNLMVLIFC---SSKIACSNLALR 198
+ Y +G D VL +L+FC +S IA S +
Sbjct: 430 PVRLQKFVYGYQANGNDFAFDKVCETKLPEVLAKHSSKKPILVFCCTRNSAIATSKNLAK 489
Query: 199 LQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIE 258
L P + +K K ++ + +L + GVA+HHA L + +R IE
Sbjct: 490 LWSSTNPPQRLWKSPTKPIHVQ----------NADLSGIVSTGVAFHHAGLDSSDRHTIE 539
Query: 259 EAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGRD-----FISLNMYKQMVGRAGRT 313
++L G + +ICCTSTLA GVNLP V+I+++ +D + L M QM+GRAGR
Sbjct: 540 TSFLNGQINVICCTSTLAVGVNLPCHLVVIKNTVSWQDGGCKEYADLEMM-QMLGRAGRP 598
Query: 314 GLQESGESIMLCKTMQDFLRFSSMMNAGPEPISS--HMDPPTLVDLILEVVAANLCSSLE 371
+S ++L T ++ + + +G EP+ S H++ L+D + + + +E
Sbjct: 599 QFDDSAVGVIL--TRKERVTHYEKLVSGTEPLESCLHLN---LIDHLNAEIGLGTVTDIE 653
Query: 372 DVKTLIKHTLFY 383
++ T F+
Sbjct: 654 SAIRWLRGTFFF 665
>gi|354543656|emb|CCE40377.1| hypothetical protein CPAR2_104140 [Candida parapsilosis]
Length = 1126
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 106/339 (31%), Positives = 166/339 (48%), Gaps = 68/339 (20%)
Query: 66 IGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFI--EGIT 123
I L+++DE H+L EP RG LE V++++ + ++I A+SAT+ N + +ST++ E +T
Sbjct: 247 IKLLLVDEVHVLKEP-RGATLEVVITRMKRICVGLRILAISATVANAHDISTWLDAETLT 305
Query: 124 YVENSRPTKHSE----YVTVDKRVFQSFDGK---SLTEIYADNLDYSLTGSGPDAVLHLV 176
+ E R K + Y ++ F SFD + L EI + +SL
Sbjct: 306 FGEEYRAVKLQKIVYGYRPSNENDF-SFDNQLNSKLVEIISK---HSLGKP--------- 352
Query: 177 QGNLMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEE 236
VLIFC+++ +C A +F K K I LK+ L
Sbjct: 353 -----VLIFCATRNSCQFTA------KFLAEKVIAKGS----ILKLKDRE-------LAN 390
Query: 237 CILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS----- 291
+ GV YHHA L +R+ IE A+L+G L+ +CCTSTLA G+NLPA V+++ +
Sbjct: 391 LVKTGVGYHHAGLIYADRKQIETAFLSGDLKYLCCTSTLAVGINLPAYLVVVKGTKCWCE 450
Query: 292 -----YVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPIS 346
Y D + QM+GRAGR +E G +I++ T + G E I
Sbjct: 451 STFQEYSETDIL------QMIGRAGRPQFEEEGVAIIM--TTSKLKSKYERIIMGTEKIE 502
Query: 347 S--HMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFY 383
S HM+ P +L+ E+ N+ +S++D + +K T FY
Sbjct: 503 SSLHMNFPE--NLLAEIAVGNI-NSIDDALSWLKTTYFY 538
>gi|326484412|gb|EGE08422.1| DEAD/DEAH box DNA helicase [Trichophyton equinum CBS 127.97]
Length = 1498
Score = 119 bits (297), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 99/372 (26%), Positives = 172/372 (46%), Gaps = 53/372 (14%)
Query: 35 RQLNKKSIYICTIEKGSKLIGSLIQENRIDE-IGLIVIDEFHMLNEPQRGPILECVVSKV 93
R + + SI I T EK + ++ + I L++IDE H+L E RG LE VVS++
Sbjct: 324 RNVQQASIIITTPEKWDSMTRKWKDHMKLMQLIKLVLIDEVHILKE-ARGATLEAVVSRM 382
Query: 94 LYLKKSIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSFDGKSLT 153
+ +++ A+SAT+ N ++T++ PT ++++ + F G+
Sbjct: 383 KSVNSNVRFVALSATVPNSEDIATWL-------GKDPT--NQHLPAHRERF----GEEFR 429
Query: 154 EIYADNLDYSLTGSGPD------------AVLHLVQGNLMVLIFC---SSKIACSNLALR 198
+ Y +G D VL +L+FC +S IA S +
Sbjct: 430 PVRLQKFVYGYQANGNDFAFDKVCETKLPEVLAKHSSKKPILVFCCTRNSAIATSKNLAK 489
Query: 199 LQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIE 258
L P + +K K ++ + +L + GVA+HHA L + +R IE
Sbjct: 490 LWSSTNPPQRLWKSPTKPIHVQ----------NADLSGIVSTGVAFHHAGLDSSDRHTIE 539
Query: 259 EAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGRD-----FISLNMYKQMVGRAGRT 313
++L G + +ICCTSTLA GVNLP V+I+++ +D + L M QM+GRAGR
Sbjct: 540 TSFLNGQINVICCTSTLAVGVNLPCHLVVIKNTVSWQDGGCKEYADLEMM-QMLGRAGRP 598
Query: 314 GLQESGESIMLCKTMQDFLRFSSMMNAGPEPISS--HMDPPTLVDLILEVVAANLCSSLE 371
+S ++L T ++ + + +G EP+ S H++ L+D + + + +E
Sbjct: 599 QFDDSAVGVIL--TRKERVTHYEKLVSGTEPLESCLHLN---LIDHLNAEIGLGTVTDIE 653
Query: 372 DVKTLIKHTLFY 383
++ T F+
Sbjct: 654 SAIRWLRGTFFF 665
>gi|427785311|gb|JAA58107.1| Putative rna helicase brr2 dead-box superfamily [Rhipicephalus
pulchellus]
Length = 2169
Score = 119 bits (297), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 125/472 (26%), Positives = 215/472 (45%), Gaps = 62/472 (13%)
Query: 14 EEFKFYLEEYAGVK-----GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGL 68
E++K LEE G + G P R + + + T EK + S + ++ L
Sbjct: 1387 EDWKVRLEEKLGKRVAELTGDVTPDFRVITSADVIVTTPEKWDGISRSWHTRGYVKQVAL 1446
Query: 69 IVIDEFHMLNEPQRGPILECVVSKVLYLK----KSIQIFAMSATIGNINALSTFIEGITY 124
I+IDE H+L E RGP+LE +VS+ Y+ + ++I +S + N L+ ++ GI
Sbjct: 1447 IIIDEIHLLGE-GRGPVLEVIVSRANYISSYTSRKVRIIGLSTALANARDLADWL-GIGE 1504
Query: 125 VE--NSRPTKHSEYVTVDKRVFQSFDGKSLTEIYA--DNLDY-SLTGSGPDAVLHLVQGN 179
V N +P + V F GK A + Y ++ PD
Sbjct: 1505 VGLYNFKPAVRPVPLEVH---VSGFPGKHYCPRMALMNKPTYRAIQQHSPDKP------- 1554
Query: 180 LMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECIL 239
VLIF SS+ AL L F ++ +Q + G NL+ +
Sbjct: 1555 --VLIFVSSRRQTRLTALDLI--AFLAAEDNPRQWLHMPDHKMDSVIQGVHDQNLKLALA 1610
Query: 240 YGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIR-----DSYVG 294
+G+ HHA L +RR++EE ++ +Q++ T+TLA GVN PA VI++ D+ V
Sbjct: 1611 FGIGLHHAGLQEKDRRIVEELFVNQKIQVLIATATLAWGVNFPAHLVIVKGTEYYDAKVS 1670
Query: 295 R--DFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPP 352
R DF ++ QM+GRAGR + G +++L ++ +F + P P+ S
Sbjct: 1671 RYVDFPITDVL-QMIGRAGRPQFDDQGVAVVLVHDLKK--KFYNKFLYEPFPVES----- 1722
Query: 353 TLVDLI-----LEVVAANLCSSLEDV---------KTLIKHTLFYQLK--SPEDQQTFLE 396
+L+D++ EVVA + S+ + + + L+++ +Y L+ P+ TFL
Sbjct: 1723 SLIDVLPDHVNAEVVAGTIRSTQDCLDYMTWTYFYRRLLQNPTYYGLEKVEPKLMNTFLS 1782
Query: 397 TTLSEIVASLLASKGTMLTMNEAGHLSLTSIAKAAVQAGLSHDVCLIIYSDL 448
+++ + +L S + +E +S T++ K A LSH+ ++Y L
Sbjct: 1783 NLVNKSLRTLQDSYCLEVDSDERTLIS-TALGKIASFYYLSHETMRLLYDQL 1833
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 98/377 (25%), Positives = 177/377 (46%), Gaps = 43/377 (11%)
Query: 33 TKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEI-GLIVIDEFHMLNEPQRGPILECVVS 91
+K ++ K + + T EK + + +++I L+++DE H+L+ RGP+LE +V+
Sbjct: 568 SKAEIMKTHMLVTTPEKWDVVTRKSTGDLALNQIVKLLILDEVHLLHG-DRGPVLEALVA 626
Query: 92 KVLYLKKS----IQIFAMSATIGNINALSTFI-----EGITYVENS-RPTKHSEYVTVDK 141
+ L +S I+I +SAT+ N ++ F+ +G+ Y +N RP
Sbjct: 627 RTLRQVESSQTMIRIVGLSATLPNYEDVAHFLRVNPRQGLFYFDNRFRPVP--------- 677
Query: 142 RVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRL-- 199
+ Q+F G T D + V +VQ V++F S+ + A L
Sbjct: 678 -LGQTFVGVKATSPLQQLTDMDEVCF--EKVYSVVQKGYQVMVFVHSRNSTVKTARTLRD 734
Query: 200 ---QFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRL 256
Q + P +++ Q+ A K+ + + ++ L + YG + HHA + +R L
Sbjct: 735 MAQQQGKLP---KFQVQQSAQYAAAEKQMANSR-NSALRDLFPYGFSVHHAGMLRSDRNL 790
Query: 257 IEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIR-----DSYVGRDFISLNMYK--QMVGR 309
+E+ + G + ++ CTSTLA GVNLPA V+I+ DS G F+ L++ Q+ GR
Sbjct: 791 VEKLFSDGLINVLVCTSTLAWGVNLPAHAVVIKGTDIYDSKHG-TFVDLDILDVMQIFGR 849
Query: 310 AGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAANLCSS 369
AGR + G ++ T ++ S++ PI S+ + +L EV + +
Sbjct: 850 AGRPQFDKEGHGTIIT-THSKLNKYLSLLTCQ-FPIESNFHQNLVDNLNAEVSLGTVSTV 907
Query: 370 LEDVKTLIKHTLFYQLK 386
E V+ L LF +++
Sbjct: 908 SEAVEWLSYTYLFVRMR 924
>gi|384251335|gb|EIE24813.1| Sec63-domain-containing protein [Coccomyxa subellipsoidea C-169]
Length = 1797
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 121/418 (28%), Positives = 197/418 (47%), Gaps = 48/418 (11%)
Query: 28 GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILE 87
G+Y P R L + ICT EK + + + + ++ L++IDE H+L RGPILE
Sbjct: 954 GEYTPDMRALMGADVIICTPEKWDGISRAWHTRSYVKQVCLLIIDEIHLLGA-DRGPILE 1012
Query: 88 CVVSKVLY----LKKSIQIFAMSATIGNINALSTFIE-GITYVENSRPTKHSEYVTVDKR 142
+VS++ Y + + I+ +S + N L+ ++ G + N +P+ V ++
Sbjct: 1013 VIVSRMRYIAATMDQPIRFVGLSTALANAIDLADWLGVGPKGLFNFKPSVRP--VPLECH 1070
Query: 143 VFQSFDGKSLTEIYADNLDYSLTGSGPD-AVLHLVQGNLMVLIFCSSKIACSNLALRL-- 199
+ Q F GK Y + T + P A + VL+F SS+ AL L
Sbjct: 1071 I-QGFPGK----FYCPRM---ATMNKPAYAAIQAHSPIKPVLVFVSSRRQTRLTALDLIG 1122
Query: 200 --QFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLI 257
D P ++Y +E+L +AL DG NL + +G+ HHA L +R ++
Sbjct: 1123 YAAADERP--RQYVHCPEEELEQAL----DG----NLRHTLQFGIGLHHAGLNETDRTVV 1172
Query: 258 EEAYLAGTLQIICCTSTLAAGVNLPAQRVIIR-----DSYVGR--DFISLNMYKQMVGRA 310
E ++AG +Q++ TSTLA GVN PA VII+ D+ R DF ++ QM+GRA
Sbjct: 1173 ENLFVAGKIQVLVATSTLAWGVNTPAHLVIIKGTEFFDAPTRRYVDFPITDVL-QMMGRA 1231
Query: 311 GRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAANLCSSL 370
GR G ++++ + F P P+ S + EVVA + S
Sbjct: 1232 GRPQYDRHGVAVIMVHEPKK--SFYKKFLYEPFPVESSLQDQVADHFNAEVVAGTIGSK- 1288
Query: 371 EDVKTLIKHTLFYQ--LKSPEDQQTFLETTLSEIVASLLAS--KGTMLTMNEAGHLSL 424
+D + T FY+ L++P LE+T E V+ L+ + TM T+ +AG +++
Sbjct: 1289 QDAIDYLTWTFFYRRLLQNPSYYN--LESTEMEDVSDFLSDMVETTMATLQDAGCVTI 1344
Score = 99.0 bits (245), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 92/333 (27%), Positives = 159/333 (47%), Gaps = 61/333 (18%)
Query: 33 TKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSK 92
+KR+L + + + T EK + + L++IDE H+LN+ +RGP++E ++++
Sbjct: 109 SKRELTETQMIVTTPEKWDVITRKGGDVAVAQAVRLLIIDEVHLLND-ERGPVIETLIAR 167
Query: 93 ----VLYLKKSIQIFAMSATIGNINALSTFI-----EGITYVENS-RPTK-HSEYVTV-D 140
V + I+I +SAT+ N + F+ G+ Y + S RP ++V V +
Sbjct: 168 TQRQVEASQSMIRIVGLSATLPNYKDVGLFLGVNVDTGLFYFDASYRPVPLEMQFVGVTE 227
Query: 141 KRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRL- 199
KRV D K++ D + Y + V+ ++ ++F S+ A L
Sbjct: 228 KRVL---DAKNVM----DEICY-------EKVVDSLRKGHQAMVFVHSRKDTGKTARTLI 273
Query: 200 ---------------QFDRFPGT-KEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVA 243
Q D++P T KE K+ + + S L++ G+
Sbjct: 274 TKAQNAGETDVFDCSQEDQYPFTLKEIKRS---------RNRHGSYPSQELQDLFPGGIG 324
Query: 244 YHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIR-----DSYVGRDFI 298
HHA + +R L+E+A+ G L+++C T+TLA GVNLPA VII+ D+ G+ F
Sbjct: 325 MHHAGMLRSDRNLMEKAFADGMLKVLCTTATLAWGVNLPAHTVIIKGTQLYDAQKGQ-FK 383
Query: 299 SLNM--YKQMVGRAGRTGLQESGESIMLCKTMQ 329
+L M +Q+ GRAGR +++G I+L + Q
Sbjct: 384 NLGMLDVQQIFGRAGRPQYEDTGLGIILTQHAQ 416
>gi|431838119|gb|ELK00051.1| Activating signal cointegrator 1 complex subunit 3 [Pteropus alecto]
Length = 2201
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 110/397 (27%), Positives = 184/397 (46%), Gaps = 51/397 (12%)
Query: 14 EEFKFYLEEYAGVK-----GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGL 68
+++K +EE G K G P + + K + + T EK + S N + ++ +
Sbjct: 1389 DDWKVRIEEKLGKKVIELTGDVTPDVKSIAKADLIVTTPEKWDGISRSWQNRNYVKQVTI 1448
Query: 69 IVIDEFHMLNEPQRGPILECVVSKVLYL----KKSIQIFAMSATIGNINALSTFIE---- 120
++IDE H+L E +RGP+LE +VS+ ++ +K ++I +S + N L+ ++
Sbjct: 1449 LIIDEIHLLGE-ERGPVLEVIVSRTNFISSHTEKPVRIIGLSTALANARDLADWLNIRQM 1507
Query: 121 GITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNL 180
G+ N RP+ + V Q F G+ A S+ A+
Sbjct: 1508 GLF---NFRPSVRPVPLEVH---IQGFPGQHYCPRMA-----SMNKPTFQAIRSHSPAK- 1555
Query: 181 MVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQ-------EKEDLIEALKEENDGKLSTN 233
VLIF SS+ AL L F T+E KQ E ED+I LK+ +N
Sbjct: 1556 PVLIFVSSRRQTRLTALELI--AFLATEEDPKQWLNMDEREMEDIIGTLKD-------SN 1606
Query: 234 LEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS-- 291
L+ + +G+ HHA L +R+ +EE ++ +Q++ TSTLA GVN PA VII+ +
Sbjct: 1607 LKLTLAFGIGMHHAGLHERDRKTVEELFVNCKVQVLIATSTLAWGVNFPAHLVIIKGTEY 1666
Query: 292 YVG--RDFISLNMYK--QMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISS 347
Y G R ++ + QM+GRAGR + G++++L ++ F P P+ S
Sbjct: 1667 YDGKTRRYVDFPITDVLQMMGRAGRPQFDDQGKAVILVHDIKK--DFYKKFLYEPFPVES 1724
Query: 348 HMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQ 384
+ L D + +A +S +D I T F++
Sbjct: 1725 SL-LGVLSDHLNAEIAGGTITSKQDAMDYITWTYFFR 1760
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 103/380 (27%), Positives = 179/380 (47%), Gaps = 56/380 (14%)
Query: 33 TKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEI-GLIVIDEFHMLNEPQRGPILECVVS 91
+K ++ + + I I+ +L+ + + + +I L+++DE H+L+E RGP+LE +V+
Sbjct: 570 SKNEILRTQLTIIEIKYTHRLMQKFVGDVALSQIVKLLILDEVHLLHE-DRGPVLESIVA 628
Query: 92 KVLYLKKS----IQIFAMSATIGNINALSTFIE-----GITYVENS-RPTKHSEYVTVDK 141
+ L +S I+I +SAT+ N ++TF+ G+ Y + RP
Sbjct: 629 RTLRQVESTQSMIRILGLSATLPNYLDVATFLHVNPYIGLFYFDGRFRPVP--------- 679
Query: 142 RVFQSFDG-KSLTEIYA-DNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRL 199
+ Q+F G KS ++ +N+D ++VL V+ V++F ++ A A+ L
Sbjct: 680 -LGQTFLGVKSTNKVQQLNNMDEVCY----ESVLKQVKAGHQVMVFVHARNATVRTAMSL 734
Query: 200 --------QFDRFPGTK--EYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADL 249
Q F T+ EY EK+ K N + E G + HHA +
Sbjct: 735 IERAKNNGQISYFLPTQRPEYGHAEKQ----VQKSRN-----KQVRELFPDGFSIHHAGM 785
Query: 250 TAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS--YVGR--DFISLNMYK- 304
+R L+E + G ++++ CT+TLA GVNLPA VII+ + Y + F+ L +
Sbjct: 786 LRQDRNLVENLFSNGHIKVLVCTATLAWGVNLPAHAVIIKGTQIYAAKRGSFVDLGILDV 845
Query: 305 -QMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVA 363
Q+ GRAGR + GE I++ T D L + PI S + +L D + +A
Sbjct: 846 MQIFGRAGRPQFDKFGEGIII--TTHDKLSHYLTLLTQQNPIESQL-LESLADNLNAEIA 902
Query: 364 ANLCSSLEDVKTLIKHTLFY 383
+++E+ I +T Y
Sbjct: 903 LGTVTNVEEAVKWISYTYLY 922
>gi|443719879|gb|ELU09831.1| hypothetical protein CAPTEDRAFT_222545 [Capitella teleta]
Length = 2144
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 122/463 (26%), Positives = 221/463 (47%), Gaps = 59/463 (12%)
Query: 28 GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILE 87
G + +K Q+ I +CT EK + + + L++IDE H+L++ RGP+LE
Sbjct: 577 GDHQLSKEQITATQIIVCTPEKWDIITRKGGERTYTQLVRLMIIDEIHLLHD-DRGPVLE 635
Query: 88 CVVSKVLY----LKKSIQIFAMSATIGNINALSTFI-----EGITYVENS-RPTK-HSEY 136
+V++ + ++ +++ +SAT+ N ++TF+ +G+ + NS RP +Y
Sbjct: 636 ALVARTIRNIETTQEDVRLVGLSATLPNYEDVATFLRVDPAKGLFFFNNSFRPVPLEQQY 695
Query: 137 VTV-DKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNL 195
+ + +K+ + F + + EI + + L +G + VL V + + +
Sbjct: 696 IGITEKKAVKRF--QVMNEIVYEKV---LEHAGKNQVL--------VFVHSRKETGKTAR 742
Query: 196 ALR---LQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAG 252
A+R L+ D +E E L+ E D ++ L++ + YG A HHA +T
Sbjct: 743 AIRDMCLEKDSLGNFL----KEGSASTEVLRREADQVKNSELKDLLSYGFAIHHAGMTRV 798
Query: 253 ERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYV-----GRDFISLNMYK--Q 305
+R L+E+ + +Q++ TSTLA GVN+PA VII+ + V GR ++ L Q
Sbjct: 799 DRILVEDLFADRHIQVLVSTSTLAWGVNMPAHTVIIKGTQVYSPEKGR-WVELGALDIMQ 857
Query: 306 MVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAAN 365
M+GRAGR GE I+L + + S+MN P+ S +L E+V
Sbjct: 858 MMGRAGRPQYDTKGEGILLT-NHSELQYYLSLMNQQL-PVESQFVRKLADNLNAEIVLGT 915
Query: 366 LCSSLEDVKTLIKHTLFY--QLKSP---------EDQQTFLETTLSEIV--ASLLASKGT 412
+ ++ E V L +T Y L+SP + +LE S+++ A++L K
Sbjct: 916 VQNAREAVNWL-GYTYLYIRMLRSPTLYGISHEHKAGDKYLEKFRSDLIHTAAMLLDKHN 974
Query: 413 MLTMN-EAGHLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLN 454
M+ + + G+ +T + + A ++HD + Y+ LL L+
Sbjct: 975 MIRYDKKTGNFQVTELGRIASHYYITHD-SVATYNQLLKPTLS 1016
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 85/335 (25%), Positives = 154/335 (45%), Gaps = 45/335 (13%)
Query: 37 LNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYL 96
L K +I I T +K L Q + + L ++DE H++ + GP+LE + S++ Y+
Sbjct: 1425 LAKGNIVISTPQKWDVLSRRWKQRKNVQNVSLFIVDELHLIG-GEEGPVLEVICSRMRYI 1483
Query: 97 ----KKSIQIFAMSATIGNINALSTFIE-GITYVENSRPTKHSEYVTVDKRVFQSFDGKS 151
+++I+I AMS+++ N +S ++ T N P + + + F S
Sbjct: 1484 SSQIERNIRIVAMSSSLSNARDISQWLGCSSTGFFNFHPNVRPVTLELHIQGFNVTHNAS 1543
Query: 152 LTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALR--------LQFDR 203
A + ++ P+ V++F S+ A+ LQ +R
Sbjct: 1544 RIIAMAKPVYQAIVKHSPEKP---------VIVFVPSRKQTRLTAIDILTYSAADLQHNR 1594
Query: 204 FPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLA 263
F E EDL L++ D L+E + GVAY H L+ E++L+E+ +
Sbjct: 1595 FLHASE------EDLQPYLEKITD----KTLKETLSNGVAYLHEGLSDLEQKLVEQLFDT 1644
Query: 264 GTLQIICCTSTLAAGVNLPAQRVIIRDS--YVGR-----DFISLNMYKQMVGRAGRTGLQ 316
G +Q++ + LA G+ L A ++ D+ Y G+ D+ ++ QM+GR R
Sbjct: 1645 GAVQVVVVSRNLAWGLGLSAHLAVVMDTQYYNGKIHAYEDYPVTDVL-QMIGRTSRPLQD 1703
Query: 317 ESGESIMLCK-TMQDFLRFSSMMNAGPEPISSHMD 350
E G++++LC+ + +DF F + P P+ SH+D
Sbjct: 1704 EEGKAVILCQSSKKDF--FKKFLYE-PLPVESHLD 1735
>gi|312372622|gb|EFR20547.1| hypothetical protein AND_19917 [Anopheles darlingi]
Length = 1139
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 116/400 (29%), Positives = 186/400 (46%), Gaps = 67/400 (16%)
Query: 66 IGLIVIDEFHMLNEPQRGPILECVVSKVLYLK------------------KSIQIFAMSA 107
I L +IDE ++ + +RG LE VV+++ Y+ SI+ A+SA
Sbjct: 176 IKLFLIDEVQVIEDSERGANLELVVARMKYIDARLNSQTDLGTGELSASTTSIRFIAVSA 235
Query: 108 TIGNINALSTFIEG------ITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLD 161
I N++ + +++ ++ E R T T+++ V + S + NL+
Sbjct: 236 CIPNVDDFARWLQNDRKVVPFSFAETDRQT------TLERHVL-GYPYHSSPFKFELNLN 288
Query: 162 YSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEA 221
Y L PD + + LIFCSS+ + A L P T
Sbjct: 289 YKL----PDIIAQYSRSK-PTLIFCSSRKSAETTASFLARTGQPLTLPSAP--------V 335
Query: 222 LKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNL 281
L+E G + L+E I GVAYHHA L A +R IE ++ G L ++CCTSTL GVNL
Sbjct: 336 LREIGSGLVGKQLQELIGKGVAYHHAGLLASDRIRIESSFREGHLGVLCCTSTLCMGVNL 395
Query: 282 PAQRVIIRDSY--VGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMN 339
PA VII+ ++ +G+D+ + N QM+GRAGR+ E G ++++ T + R+ ++
Sbjct: 396 PAYLVIIKATFNHMGKDYAN-NYLLQMMGRAGRSQYNEHGVAVVMT-TEANVERYRKLV- 452
Query: 340 AGPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLF----------YQLKSP- 388
+ PI S + L +L+ +A + V+ I+ T F YQL P
Sbjct: 453 SDTLPIESQLH-QKLPELLNSEIAHGIIYDRAAVREWIRSTFFYVRVQTNPGHYQLSGPV 511
Query: 389 ---EDQ-QTFLETTLSEIVAS--LLASKGTMLTMNEAGHL 422
DQ + ETTL + S ++A++ T+L +G L
Sbjct: 512 YNMNDQIERLCETTLESLQTSGLIVANRSTILQPAASGRL 551
>gi|320588500|gb|EFX00969.1| pre-mRNA splicing factor [Grosmannia clavigera kw1407]
Length = 2847
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 128/505 (25%), Positives = 230/505 (45%), Gaps = 56/505 (11%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V E+ + +K E F + E G + TK+Q+ + + + T EK +
Sbjct: 624 LVQEQVGNFSKRLEPFGVSVRELTGDRQL---TKQQIAETQVIVTTPEKWDVITRKATDL 680
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVL----YLKKSIQIFAMSATIGNINALS 116
+ + LI+IDE H+L++ RGP+LE +VS+ L +++++ +SAT+ N +
Sbjct: 681 SYTRLVRLIIIDEIHLLHD-DRGPVLESIVSRTLRRTEQTGEAVRLVGLSATLPNYRDVG 739
Query: 117 TFI-----EGITYVENS-RPTK-HSEYVTVDKRVFQSFDGKSLTEIYA-DNLDYSLTGSG 168
+F+ + + + + S RP E++ V +R K + ++ A +++ Y+
Sbjct: 740 SFLRVDATKDLFHFDGSYRPCPLRQEFIGVTER-------KPIKQLKAMNDITYA----- 787
Query: 169 PDAVLHLVQGNLMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDL--IEALKEEN 226
+ H+ Q +LIF S+ + A ++ DR + + K D E L+E
Sbjct: 788 -KVLEHVGQHRNQMLIFVHSRKDTAKTARHIR-DRAVELETISQILKHDAGSTEVLREAA 845
Query: 227 DGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRV 286
+ L++ + YG HHA ++ +R +E+ + G +Q++CCT+TLA GVNLPA V
Sbjct: 846 EQATDRELKDLLPYGFGIHHAGMSRADRTDVEDLFAQGAIQVLCCTATLAWGVNLPAHTV 905
Query: 287 IIRDSYV----GRDFISLNMYK--QMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNA 340
II+ + V ++ L+ QM+GRAGR GE I++ + + S++N
Sbjct: 906 IIKGTQVYSPEKGSWVELSPQDVLQMLGRAGRPQFDTYGEGIIIT-AHTELPYYLSLLNQ 964
Query: 341 GPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLF---------YQLKSPEDQ 391
PI S + L EVV N+ S E V+ L LF YQ+ + +
Sbjct: 965 Q-LPIESQLVSRLADSLNAEVVLGNVRSRDEAVEWLGYTYLFVRMLRAPGLYQVGAEYEA 1023
Query: 392 QTFLE---TTLSEIVASLLASKGTMLTMNEAGHLSLTSIAKAAVQAGLSHDVCLIIYSDL 448
LE L+ A +L G + + G L T + + A ++H + Y+ L
Sbjct: 1024 DEALEQKRVDLAHAAAVVLRRAGLVRYDEKTGRLQATELGRIASHYYVTHG-SMETYNSL 1082
Query: 449 LH---NKLNFCLLNSLHMLFLVIPL 470
+ + + +L F IP+
Sbjct: 1083 VQPGVTAIELMRIFALSAEFRYIPV 1107
Score = 40.8 bits (94), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 73/165 (44%), Gaps = 18/165 (10%)
Query: 234 LEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLA---AGVNLPAQRVIIRD 290
L E + +GVAY+H L+A ++R+ + G +Q++ + + A + A V++
Sbjct: 1721 LREALSHGVAYYHEALSATDKRIARHLFANGAVQVMVASRDVCWELARDDCTAHLVVVMG 1780
Query: 291 S--YVGRDF----ISLNMYKQMVGRAGRTGLQESGES-----IMLCKTMQDFLRFSSMMN 339
+ Y GR+ +L QM GRA R + +G +ML +D+ + +N
Sbjct: 1781 TQQYDGREHRYVDYALAELLQMFGRALRPAKEGAGAGRSRGVLMLPAVKRDY--YKKFLN 1838
Query: 340 AGPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQ 384
P+ S + L D + V+ S +D + T FY+
Sbjct: 1839 EA-LPVESLLH-DNLADAFMAEVSVRAIRSGDDALEWLTRTFFYR 1881
>gi|452984171|gb|EME83928.1| hypothetical protein MYCFIDRAFT_202824 [Pseudocercospora fijiensis
CIRAD86]
Length = 1360
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 99/369 (26%), Positives = 167/369 (45%), Gaps = 46/369 (12%)
Query: 35 RQLNKKSIYICTIEKGSKLIGSLIQENRIDE-IGLIVIDEFHMLNEPQRGPILECVVSKV 93
R + SI I T EK + ++ + + L +IDE H+L E RGP LE VVS++
Sbjct: 274 RNVQHASIIITTPEKWDSMTRKWKDHQKLMQMVKLFLIDEVHILKE-DRGPTLEAVVSRM 332
Query: 94 LYLKKSIQIFAMSATIGNINALSTFI------EGIT-----YVENSRPTKHSEYVTVDKR 142
+ ++ A+SAT+ N ++T++ GI + E RP + +V +
Sbjct: 333 KSVGSDVRFVALSATVPNSQDIATWLGKDAMNPGIPAPRERFGEEFRPVRLQRHVCAYQY 392
Query: 143 VFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLA-LRLQF 201
F D L PD + Q ++IFC+++ +C A L +
Sbjct: 393 SSNDF-----------AFDKVLDNKLPDIIAKYSQRK-PIMIFCATRKSCVETAKLLATW 440
Query: 202 DRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAY 261
G ++ ++ ++ L E + GVA+HHA LT +R +E+ Y
Sbjct: 441 WSNAGPRDRYWNAPRGRVQITDKD--------LRERVTSGVAFHHAGLTTEDRTAVEKGY 492
Query: 262 LAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGRDFISLNMYK-----QMVGRAGRTGLQ 316
L G + +ICCTSTLA GVNLP VII+++ + Y QM+GRAGR
Sbjct: 493 LGGEIGVICCTSTLAVGVNLPCHMVIIKNTVTYTQGNGMKEYSDLEVMQMLGRAGRPQFD 552
Query: 317 ESGESIMLCKTMQDFLRFSSMMNAGPEPISS--HMDPPTLVDLILEVVAANLCSSLEDVK 374
+S ++++ + +Q + M+ +G E + S H++ L++ + + S+L K
Sbjct: 553 DSAVAVIMTR-LQKQETYEKMI-SGSEVLESRLHLN---LIEHLNAEIGLGTVSNLSSAK 607
Query: 375 TLIKHTLFY 383
+ T Y
Sbjct: 608 QWLAGTFLY 616
>gi|254566105|ref|XP_002490163.1| RNA-dependent ATPase RNA helicase (DEIH box) [Komagataella pastoris
GS115]
gi|238029959|emb|CAY67882.1| RNA-dependent ATPase RNA helicase (DEIH box) [Komagataella pastoris
GS115]
gi|328350564|emb|CCA36964.1| pre-mRNA-splicing helicase BRR2 [Komagataella pastoris CBS 7435]
Length = 2147
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 109/414 (26%), Positives = 196/414 (47%), Gaps = 51/414 (12%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V E+ + + + F + E G TK Q+ I + T EK + +
Sbjct: 558 LVQEQVREFQRRFDSFGIKVGELTGDSNL---TKHQIKSTQILVTTPEKWDIITRKMSDI 614
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLY-----LKKSIQIFAMSATIGNINAL 115
+ + + L++IDE H+L++ +RGP++E +VS+ + + +++ +SAT+ N N +
Sbjct: 615 SYVRLVRLLIIDEIHLLHD-ERGPVIESIVSRSIRNDEISGNEPVRLVGLSATLPNFNDV 673
Query: 116 STFI-----EGITYVENS-RPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGP 169
+TF+ +G+ Y + S RP + Q F G + E A ++ +
Sbjct: 674 ATFLRVDESKGLFYFDGSYRPCP----------LAQQFVG--ILEKKALKRYQAMNQACL 721
Query: 170 DAVLHLVQGNLMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDL--IEALKEEND 227
D V+ +QG+ +++F S++ + A R + + +K DL E L+EE+
Sbjct: 722 DKVIDNLQGDHQIIVFVHSRVDTAKTA-RYLMENLSACNKLDLLQKTDLGSKEILREESK 780
Query: 228 GKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVI 287
S +L ++ G+ HHA L +R L+E+ + G +Q++ T+TLA GVNLPA VI
Sbjct: 781 SFSSEDLRNLVVSGIGIHHAGLNKQDRSLVEDLFADGYVQVLVSTATLAWGVNLPAHTVI 840
Query: 288 IRDSYV------------GRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFS 335
I+ + V +D + QM+GRAGR ++GE I++ T+Q+ +++
Sbjct: 841 IKGTSVYSPEKGVWSQLAPQDIL------QMLGRAGRPRYDKTGEGIII--TVQEEVQYY 892
Query: 336 SMMNAGPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQ-LKSP 388
+ PI S + L E+V + S E V LF + L+SP
Sbjct: 893 LAILNQQLPIESQLMSKIHDCLNSEIVLGTVTSRQEAVSWFSYSYLFVRMLRSP 946
>gi|123464703|ref|XP_001317120.1| DEAD/DEAH box helicase family protein [Trichomonas vaginalis G3]
gi|121899846|gb|EAY04897.1| DEAD/DEAH box helicase family protein [Trichomonas vaginalis G3]
Length = 774
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 151/645 (23%), Positives = 283/645 (43%), Gaps = 58/645 (8%)
Query: 37 LNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYL 96
L ++SI +CT E+ LI S + D + LIVIDEFHML++ RG LE ++ + L
Sbjct: 142 LTQRSIGVCTYERAHSLINSS-ASGKFD-LDLIVIDEFHMLDDNDRGANLESLIVLSMLL 199
Query: 97 KKSIQIFAMSATIGNINA--LSTFIEGITYVE--NSRPTKHSEYVTVDK----RVFQSFD 148
+I ++AT+ +A LS ++ G ++ N P++ Y+ V + +
Sbjct: 200 PSHPRIIGLTATLTPDDAVKLSIWLGGFSFKAEINESPSRQQFYICRPNGELCPVRKGYI 259
Query: 149 GKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRL--QFDRFPG 206
+ + D+ Y + P + + VLIF ++ +AL L
Sbjct: 260 CPAFRTLKKDDKFYISSIIAP----FMKMNSKNVLIFAQTRKESEEIALSLAQMLGNINK 315
Query: 207 TKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTL 266
E + E++ L+E L E C++ G+A+HHA LT ER LIE+A+ G +
Sbjct: 316 EDENIQTERKKLLEKLDESFS---------CVMNGIAFHHAGLTQEERSLIEDAFRNGII 366
Query: 267 QIICCTSTLAAGVNLP-AQRVIIRDSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLC 325
+II TSTL+AGV+ V+I ++ IS + + QM GRAGR + SG +++
Sbjct: 367 KIIVATSTLSAGVDFQNISVVVILSAFKSNLQISPSKFMQMCGRAGRNE-RSSGTVVVVE 425
Query: 326 KTMQDFLRFSSMMNAGPEPISSHM--DPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFY 383
+ D + +M PI + + L IL + A S+ ++K+++ Y
Sbjct: 426 RFNSDETQILRLMRNEIPPIKLKLIENQNELAKTILHMHAFFTKQSIGNLKSVLYS---Y 482
Query: 384 QLKSPEDQQTFLETTLSEIVASLLASKGTMLTMNEAGHLSLTSIAKAAVQAGLSHDVCLI 443
++ E Q EI A+L + K + ++ ++ +A + L+ + +
Sbjct: 483 IIEGNEVSQ--------EIQAALDSLKSNGMCISP----KVSKFGRAVALSNLNINNAIH 530
Query: 444 IYSDLLHNKLNFCLLNSLHMLFLVIPLEYRIPSDGILLSRSKVYDRYTKFHPQTLRVAEA 503
+ + L N NF + + ++L P+ L + D ++ + A A
Sbjct: 531 LNAILRKNMRNFMMSDEAFTMYLCC-----YPNISFLRIPNYNEDIWSVIMKRHCEAANA 585
Query: 504 -LGVTENLVALNVTG------KLKDEKKALLCRFFHACILYDVLNFDNHQKVAKMYGIQN 556
L +++ + + K+ D+ +L + F A IL ++ ++K +G+
Sbjct: 586 ILNSASDIIKIRASDCDKGLPKMNDQNDEILGKIFAAAILVSFSEENSVDSISKTHGVDK 645
Query: 557 SHLQNFLNVTSYFASKVYRFCEELPELWCYKQLLTDLPQTLMYCRAPNLRALMDLPGVKI 616
++N + + +A++V +FCE +L + + ++ LM L G
Sbjct: 646 GAVENLRDSSVVYATQVVKFCEA-SGFREISAILAVARNRIQHGAKNDVIPLMSL-GCSQ 703
Query: 617 GRARQLLNAGYSSLELIARADAKEMVAKIRHLPLRSARNLISAAK 661
AR L +AG +S I + ++++ I + S + + AK
Sbjct: 704 SIARSLFSAGITSKYDIEKCSLDKLISIISASQINSTVSSVDCAK 748
>gi|19114258|ref|NP_593346.1| U5 snRNP complex subunit Brr2 (predicted) [Schizosaccharomyces pombe
972h-]
gi|74698435|sp|Q9UT24.1|BRR2_SCHPO RecName: Full=Pre-mRNA-splicing factor brr2; AltName:
Full=Pre-mRNA-splicing factor spp41; AltName:
Full=Pre-mRNA-splicing helicase BRR2
gi|6014422|emb|CAB57421.1| U5 snRNP complex subunit Brr2 (predicted) [Schizosaccharomyces pombe]
Length = 2176
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 123/473 (26%), Positives = 222/473 (46%), Gaps = 64/473 (13%)
Query: 24 AGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRG 83
A + G TK+Q+++ I + T EK + + ++ + L++IDE H+L++ +RG
Sbjct: 606 AELTGDSQLTKQQISETQIIVTTPEKWDIITRKANDLSYVNLVRLVIIDEVHLLHD-ERG 664
Query: 84 PILECVVSKVLYLKKS----IQIFAMSATIGNINALSTFI-----EGITYVENS-RPTK- 132
P+LE +V+++ ++ +++ +SAT+ N +++F+ +G+ Y +++ RP
Sbjct: 665 PVLESIVARIFRHQEETLEQVRLVGLSATLPNYTDVASFLHVDPKKGLFYFDSTYRPCPL 724
Query: 133 HSEYVTV-DKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIA 191
E++ + +K F+ + Y + ++ G VLIF S+
Sbjct: 725 KQEFIGITEKTPFKRMQTTN-EACYEKVMQHA--------------GKNQVLIFVHSRKE 769
Query: 192 CSNLALRLQFDRFPGTKEYKKQEKEDLI-------EALKEENDGKLSTNLEECILYGVAY 244
+ A RF K +++ L+ E L+ E D NL++ + YG A
Sbjct: 770 TAKTA------RFIRDKALEEETIGHLLRSDAASREILRAEADSTSDENLKDLLPYGFAI 823
Query: 245 HHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS--YVGRDFISLNM 302
HHA + +R+ E+ + GT+Q++ T+TLA GVNLPA VII+ + Y I +
Sbjct: 824 HHAGMRREDRQTSEDLFADGTIQVLVSTATLAWGVNLPAHTVIIKGTQVYSPEKGIWTEL 883
Query: 303 YK----QMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLI 358
QM+GRAGR GE I++ + + S+MN PI S L D +
Sbjct: 884 SPQDVLQMLGRAGRPQFDTYGEGIIIT-AHSELQYYLSLMNQQ-LPIESQF-MRRLADCL 940
Query: 359 LEVVAANLCSSLEDVKTLIKHTLFY--QLKSPE--------DQQTFLETTLSEIV--ASL 406
V+ S+ED + +T Y L+SP D +L ++++ A++
Sbjct: 941 NAEVSLGTVRSIEDGVDWLGYTYLYVRMLRSPALYSVGPEYDDDKYLVQKRADLLHSAAI 1000
Query: 407 LASKGTMLTMN-EAGHLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLL 458
L K +L N ++G L+ T + K A ++H+ + IY+ LL +F L
Sbjct: 1001 LLEKCKLLVYNRQSGTLTATELGKVAASYYVTHN-SMAIYNRLLMQTTSFIEL 1052
Score = 41.6 bits (96), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 76/399 (19%), Positives = 165/399 (41%), Gaps = 38/399 (9%)
Query: 44 ICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLY----LKKS 99
CT + L I ++ + DE +L GP+ E V+S++ Y L+K+
Sbjct: 1464 FCTPSQWDSLSKRWRSMRSIQKVDFYICDELQLLGG-FYGPLYEIVISRIRYMAVQLEKN 1522
Query: 100 IQIFAMSATIGNINALSTFI-EGITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYAD 158
I++ +S ++ N L ++ + N P +T+ QSF S+T +
Sbjct: 1523 IRVVGLSVSVANARDLGEWLGTSPQCIFNFSPKDRPNPLTIH---LQSF---SIT--HFP 1574
Query: 159 NLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDL 218
+L +++ ++ + + ++F + LA L EY E+
Sbjct: 1575 SLMLAMSKPIYRSLKNFISQRKSTIVFTPDRKVAKQLAFDLVTFSMADEDEYLFSLMEN- 1633
Query: 219 IEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAG 278
EA + D L +L+ +G+AY ++ ++ +++ Y G ++++ + +
Sbjct: 1634 -EAFNKVEDAALQQSLK----HGIAYISEITSSNDQNIVQYLYRHGLIKVLIASRDVIYS 1688
Query: 279 VNLPAQRVIIRDS--YVGRD--FISLNMYK--QMVGRAGRTGLQESGESIMLCKTMQDFL 332
+ + VI+ + Y G++ +I + + QM+G G E + I++ T +
Sbjct: 1689 LKAKSNAVIVMGTQYYDGKEHRYIDYPISELLQMLGFTASIGSSELSQVILMTVTTKKEY 1748
Query: 333 RFSSMMNAGPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQ--LKSPE- 389
+ +N P P+ SH+ L D + ++ S +D + + Y+ + +P
Sbjct: 1749 -YKKFLNE-PLPMESHLQ-VWLHDAFVSEISTQTIESKQDAVDWLTWSYMYRRLVANPAY 1805
Query: 390 -DQQTFLETTLSEIVASLLASKGTMLTMNEAGHLSLTSI 427
Q ++SE ++ L+ + TMN+ L ++
Sbjct: 1806 YGLQDITHESVSEFLSDLVET-----TMNDLSEARLITV 1839
>gi|198430493|ref|XP_002126334.1| PREDICTED: similar to activating signal cointegrator 1 complex
subunit 3-like 1 [Ciona intestinalis]
Length = 2143
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 127/479 (26%), Positives = 217/479 (45%), Gaps = 85/479 (17%)
Query: 24 AGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRG 83
A + G + K ++N + ICT EK + + + LI++DE HML++ RG
Sbjct: 573 AELTGDHQLCKEEINATQVIICTPEKWDIITRKGGERTYTQLVRLIIMDEIHMLHD-SRG 631
Query: 84 PILECVVSKVLY----LKKSIQIFAMSATIGNINALSTFI-----EGITYVENS-RPTK- 132
P+LE +V++ + ++ +++ +SAT+ N ++TF+ +G+ Y +NS RP
Sbjct: 632 PVLESIVARTIRSIETTQEDVRLVGLSATLPNYEDVATFLRVDPAKGLFYFDNSFRPVPL 691
Query: 133 HSEYVTV-DKRVFQSFDGKSLTEI-YADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKI 190
Y+ + +K+ + F + + EI Y +D + G VLIF S+
Sbjct: 692 EQHYIGITEKKPMKRF--QVMNEIVYEKVVDNA--------------GRNQVLIFVHSRK 735
Query: 191 ACSNLALRL-----------QFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECIL 239
A + QF R E E L+ E + + L++ +
Sbjct: 736 ETGKTARAIRDMCIDNDTLGQFLR----------EGSASTEVLRTEAEQVKNMELKDLLP 785
Query: 240 YGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYV-----G 294
YG A HHA +T +R L+E+ + +Q++ TSTLA GVNLPA VII+ + V G
Sbjct: 786 YGFAIHHAGMTRVDRTLVEDLFADRHIQVLVSTSTLAWGVNLPAHTVIIKGTQVYNPEKG 845
Query: 295 RDFISLNMYK--QMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPP 352
R ++ L QM+GRAGR GE +++ T + + S++N P+ S M
Sbjct: 846 R-WVELGALDVLQMMGRAGRPQYDTKGEGVLIT-THNELQYYLSLLNQQL-PVESQMISC 902
Query: 353 TLVDLILEVVAANLCSSLEDVKTL---------IKHTLFYQLKSPED----QQTFLETTL 399
L E+V N+ + + V L ++ Y ++SPED QQ ++ L
Sbjct: 903 LPDALNAEIVLGNVQNIKDAVNWLGYTYLYIRALRQPSLYGVESPEDDPMLQQRRID--L 960
Query: 400 SEIVASLLASKGTMLTMNEAGHLSLTSIAKAAVQAGLSHDVC----LIIYSDLLHNKLN 454
+ ++LA + ++G L +T + + A SH C + Y+ LL L+
Sbjct: 961 AHAAVTMLAKNNLVKYDRKSGQLQVTDLGRIA-----SHYYCTNESMATYNQLLKPTLS 1014
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 97/404 (24%), Positives = 175/404 (43%), Gaps = 56/404 (13%)
Query: 35 RQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVL 94
R +++ SI I T E+ + Q + + L ++DE H++ + GP LE V S++
Sbjct: 1421 RLISRASIIIATSERWDVISRRWKQRKNVHTVSLFIVDEIHLIG-GESGPELEVVCSRMR 1479
Query: 95 Y----LKKSIQIFAMSATIGNINALSTFIEGIT--YVENSRPTKHSEYVTVDKRVFQSFD 148
Y L K+I+I A+ +++ N ++ ++ G T + N P + + + F
Sbjct: 1480 YIASQLDKNIRIIALGSSLANAKDVAQWL-GCTNMHTFNFHPNVRPVPLELHIQGFNISH 1538
Query: 149 GKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRL--------Q 200
+S A + ++T P +IF S+ C A+ +
Sbjct: 1539 TQSRLLSMAKPVYNAITKHSPKQA---------CIIFVPSRKQCKLTAVDILTYTAADAS 1589
Query: 201 FDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEA 260
RF E E +E +K+ L+E + GVAY H T ER ++E+
Sbjct: 1590 AQRFLHCNE---SELGAYLEHVKD-------ATLKETLSNGVAYLHDGSTELERTVVEQL 1639
Query: 261 YLAGTLQIICCTSTLAAGVNLPAQRVIIRDS--YVGR-----DFISLNMYKQMVGRAGRT 313
+ +G +Q++ + +L G+NL A V+I D+ Y G+ D+ ++ QM+GRA R
Sbjct: 1640 FSSGAVQVLVASRSLCWGLNLAAHLVVIMDTQHYNGKIHAYVDYPVTDIL-QMIGRANRP 1698
Query: 314 GLQESGESIMLCK-TMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAANLCSSLED 372
E G+ +++C+ + +DF + P P+ SH+D L D + + + +D
Sbjct: 1699 LKDEEGKCVIMCQSSKKDFFK---KFVYEPLPVESHLD-HCLHDHFNAEIVTKIIENKQD 1754
Query: 373 VKTLIKHTLFYQLKSPEDQ--------QTFLETTLSEIVASLLA 408
+ T Y+ S L +LSE+V + LA
Sbjct: 1755 AVDYLTWTFLYRRMSQNPNYYNLQGVSHRHLSDSLSELVENTLA 1798
>gi|403371282|gb|EJY85519.1| Superfamily II helicase [Oxytricha trifallax]
Length = 2383
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 120/474 (25%), Positives = 221/474 (46%), Gaps = 63/474 (13%)
Query: 28 GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILE 87
G + P + L I I T EK + + + + ++ L++IDE H+L + +RGP++E
Sbjct: 1524 GDFTPDLKALKSADILITTPEKWDGISRNWQHRSYVQQVALVIIDEIHLLGQ-ERGPVIE 1582
Query: 88 CVVSKVLYLKK----SIQIFAMSATIGNINALSTFIEGITYVE--NSRPTKHSEYVTVDK 141
+VS++ Y+ + S++ +S + N ++ ++ GI + N +P+ + V
Sbjct: 1583 VIVSRMRYISEQTGNSVRFVGLSTALANAKDVADWL-GIHKLGLYNFKPSVRPVPIKV-- 1639
Query: 142 RVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLAL---- 197
F+ F K Y + ++ A++ + + VLIF SS+ AL
Sbjct: 1640 -FFEGFSEKH----YCPRMG-TMNKPAFKAIMTHSKDH-PVLIFVSSRRQTRLTALDLIA 1692
Query: 198 --------RLQFDRFPGTKEYKKQEKEDLI---EALKEENDGKLSTNLEECILYGVAYHH 246
R +D + + K + E++ E +K+EN L + I YGV HH
Sbjct: 1693 LCAADQQEREGYDIDIFKRPFLKMDPEEIYHISELIKDEN-------LRQTINYGVGMHH 1745
Query: 247 ADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIR-----DSYVGR--DFIS 299
A LT +R+++E+ ++ +Q++ TSTLA GVN PA+ VII+ D V R DF
Sbjct: 1746 AGLTENDRKIVEDLFVKKKIQVLVTTSTLAWGVNFPARLVIIKGTEFFDPKVRRYVDF-P 1804
Query: 300 LNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLIL 359
L QM+GRAGR E+G + + ++ F P P+ S + + L
Sbjct: 1805 LTDLLQMIGRAGRPQFDETGYACVFVH--EEKKNFYKKFLYEPFPVESSLQGQIVDHLNA 1862
Query: 360 EVVAANLCSSLEDV---------KTLIKHTLFYQLKSPEDQQ--TFLETTLSEIVASLLA 408
E+ + L ++ + + L K+ +Y+LK + + T+L+ +++ ++ L+
Sbjct: 1863 EIASGTLLTNQNCIDYLTWTYFFRRLTKNPAYYKLKKNDATEINTYLKAMVNDSLSKLVN 1922
Query: 409 SKGTMLTMNEAGH-LSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSL 461
+K + N H +S T++ + A LSH+ + + +N LLN+L
Sbjct: 1923 AK--CIEYNSEDHTVSSTTLGRLASFYYLSHETIQFMNDKIGNNDSVATLLNTL 1974
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 101/382 (26%), Positives = 173/382 (45%), Gaps = 65/382 (17%)
Query: 34 KRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKV 93
K+++ + I + T EK + + + +D + +++IDE H+LN+ +RG +LEC+V++
Sbjct: 654 KQEIQETHIIVSTPEKWD--VVTRKSDGMMDMVNVMIIDEIHLLND-ERGLVLECLVARA 710
Query: 94 LY----LKKSIQIFAMSATIGNINALSTFI----EGITYVENS-RPTKHSEYVTVDKRVF 144
++K I+I +SAT+ N ++ FI G Y + S RP T K F
Sbjct: 711 FMTSSKIQKPIRIVGLSATLPNYEDVARFIGAEGPGTFYFDASYRP-------TPLKCAF 763
Query: 145 QSF----DGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRL- 199
+ + I D + + L +++ V+IF + A L
Sbjct: 764 YGIKNLGNAQRANNIMNDIIYHELK--------RILRMGKQVIIFVHKRAETHTTAKELI 815
Query: 200 --------QFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTA 251
D F + Y +K E + ++ +G + H+A L
Sbjct: 816 EILAKRPHDRDLFDCERSY----------TVKTEVQRSKNEQVKALFEHGFSIHNAGLLR 865
Query: 252 GERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIR-----DSYVG--RDFISLNMYK 304
+R L+E+ +L G ++++C T+TLA GVNLPA VII+ DS G +D I + +
Sbjct: 866 KDRNLVEKMFLDGHIKVLCSTATLAWGVNLPAYAVIIKGTKMYDSATGTYKD-IGVFDVQ 924
Query: 305 QMVGRAGRTGLQESGESIMLC--KTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVV 362
Q+ GRAGR GE+I+L K M D+++ S + I S++ L + I +
Sbjct: 925 QIFGRAGRPQFDNEGEAIILTLIKEMDDYVKIMS----NKQNIESNL-YKGLDNCINAEI 979
Query: 363 AANLCSSLEDVKTLIKHTLFYQ 384
+ +L D +K T FYQ
Sbjct: 980 SGGTIGTLTDGIHWLKKTYFYQ 1001
>gi|116203115|ref|XP_001227369.1| hypothetical protein CHGG_09442 [Chaetomium globosum CBS 148.51]
gi|88177960|gb|EAQ85428.1| hypothetical protein CHGG_09442 [Chaetomium globosum CBS 148.51]
Length = 1300
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 91/313 (29%), Positives = 149/313 (47%), Gaps = 44/313 (14%)
Query: 35 RQLNKKSIYICTIEKGSKLIGSLIQENRIDE-IGLIVIDEFHMLNEPQRGPILECVVSKV 93
R++ SI + T EK + R+ + + L +IDE H+L + RG LE VVS++
Sbjct: 164 RRVGDASIIVTTPEKWDSITRKWQDHRRLLQMVELFLIDEVHILKD-VRGATLEAVVSRM 222
Query: 94 LYLKKSIQIFAMSATIGNINALSTFI-----------EGITYVENSRPTKHSEYVTVDKR 142
+ +++ A+SAT+ N + ++ ++ T+ E RP K ++V
Sbjct: 223 KTIGANVRFIALSATVPNSDDIARWLGRNHTTQQLPAHRETFGEEFRPVKLQKFV----- 277
Query: 143 VFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRLQ-- 200
F S I+ LD L P + +G +L+FC ++ +C + A L
Sbjct: 278 --HGFGSNSNDFIFDKFLDQKL----PGLISKYARGK-PILVFCFTRKSCESTAAMLADF 330
Query: 201 -FDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEE 259
DR G + + + +S L+E + +GVA+HHA L +R IE+
Sbjct: 331 ASDRPDGNDMWPVPTQRVPV----------VSRELQEIVRFGVAFHHAGLDPQDRATIEQ 380
Query: 260 AYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGRDFISLNMYK-----QMVGRAGRTG 314
+L G L +ICCTSTLA G+NLP V+++ + VG L Y QM+GRAGR
Sbjct: 381 NFLKGQLGVICCTSTLAVGINLPCHTVVLKGT-VGFADDQLKEYSDLEVMQMLGRAGRPQ 439
Query: 315 LQESGESIMLCKT 327
+S +I+L ++
Sbjct: 440 FDDSATAIILTRS 452
>gi|85859512|ref|YP_461714.1| helicase [Syntrophus aciditrophicus SB]
gi|85722603|gb|ABC77546.1| helicase [Syntrophus aciditrophicus SB]
Length = 882
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 105/399 (26%), Positives = 184/399 (46%), Gaps = 48/399 (12%)
Query: 66 IGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYV 125
I L+V+DE + +P RGP LE ++K++ Q+ +SA +GN +AL+ ++
Sbjct: 145 IALVVVDELQEIGDPDRGPGLEITLTKIVSSPHRPQVIGLSAVLGNTDALARWLGADLLS 204
Query: 126 ENSRPTKHSEYVTVDKRVFQ-------SFDGKSLTEI-YADNLDYSLTGSGPDAVLHLVQ 177
+ RP + E V + K VF + + L EI + D + L V HL
Sbjct: 205 FDKRPVELHEGV-LYKGVFHYRTHNTLEKNSEPLAEIDFEDPTEVLLAN-----VAHLAG 258
Query: 178 GNLMVLIFCSSKIA----CSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTN 233
VL+F SK+ L R+ GT + AL EE L
Sbjct: 259 EGDQVLVFLPSKLDTMLFAGLLTERVDLACAAGTLDEL---------ALLEETS--LKEK 307
Query: 234 LEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYV 293
L C+ VA+HHADL+ ER +IE+ G +++I CT+TL+ GVNLPA V +
Sbjct: 308 LSSCLGKAVAFHHADLSRDERSVIEKYARKGEIKVIFCTTTLSMGVNLPATTVFLHTQKW 367
Query: 294 ---GRDF-----ISLNMYKQMVGRAGRTGL-QESGESIMLCKTMQDF-LRFSSMMNAGPE 343
GRD I Y+ + GRAGR G ++ G SI + ++ + + + ++
Sbjct: 368 ETDGRDHMILTPIGWAEYENISGRAGRLGFGRDFGRSITIAGNDYEYEMLWENYIDGQVG 427
Query: 344 PISSHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQLKSPEDQQTFLETTLSEIV 403
++S +D + + ++ +VA+ + + E++++ + HT +S E+ + +E L
Sbjct: 428 MLTSRLDGKGMENHLVNIVASGVARNREEIESFLSHTFQGLFESRENTRKGMEKALR--- 484
Query: 404 ASLLASKGTMLTMNEAGHLSLTSIAKAAVQAGLSHDVCL 442
A+ + + G ++++S+ G++ CL
Sbjct: 485 ---FATDRRFIEEDGRGEMAVSSLGVVVASKGIT---CL 517
>gi|303311133|ref|XP_003065578.1| DEAD/DEAH box helicase family protein [Coccidioides posadasii C735
delta SOWgp]
gi|240105240|gb|EER23433.1| DEAD/DEAH box helicase family protein [Coccidioides posadasii C735
delta SOWgp]
Length = 1441
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 102/373 (27%), Positives = 167/373 (44%), Gaps = 55/373 (14%)
Query: 35 RQLNKKSIYICTIEKGSKLIGSLIQENRIDE-IGLIVIDEFHMLNEPQRGPILECVVSKV 93
R + SI I T EK + R+ + I L +IDE H+L E RG LE VVS++
Sbjct: 277 RNVQNASIIITTPEKWDSMTRKWKDHMRLMQLIKLFLIDEVHILKE-TRGATLEVVVSRM 335
Query: 94 LYLKKSIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSFDGKSLT 153
S++ A+SAT+ N ++T++ G P H + G+
Sbjct: 336 KSANSSVRFIALSATVPNSEDIATWL-GRDPTNQHLPAHHERF------------GEEFR 382
Query: 154 EIYADNLDYSLTGSGPDAVLHLVQGNLM------------VLIFCSSK---IACS-NLAL 197
+ Y +G D V V + + ++IFC ++ I+ S NLA
Sbjct: 383 PVKLQKFVYGYQSNGNDFVFEKVCDSKLPEVISKHSRRKPIMIFCCTRHSAISTSKNLAK 442
Query: 198 RLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLI 257
PG + + +K +++ + +L+ + GVA+HHA L +R +
Sbjct: 443 LWTATNAPG-RLWNSPKKPIIVQ----------NQDLKATVSTGVAFHHAGLDTSDRHAV 491
Query: 258 EEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS-----YVGRDFISLNMYKQMVGRAGR 312
E AYL G + +ICCTSTLA G+NLP VII+++ + R++ L QM+GRAGR
Sbjct: 492 EMAYLQGHISVICCTSTLAVGINLPCHLVIIKNTVSWQDHHRREYTDLETM-QMLGRAGR 550
Query: 313 TGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISS--HMDPPTLVDLILEVVAANLCSSL 370
S +++L K ++ + + G EP+ S H + L+D + V + +
Sbjct: 551 PQFDNSATAVILTK--KERVDHYQKLVTGSEPLESCLHFN---LIDHLNAEVGLGTVTDI 605
Query: 371 EDVKTLIKHTLFY 383
E + T F+
Sbjct: 606 ESATMWLAGTFFF 618
>gi|452949550|gb|EME55017.1| DEAD/DEAH box helicase [Amycolatopsis decaplanina DSM 44594]
Length = 882
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 93/356 (26%), Positives = 163/356 (45%), Gaps = 31/356 (8%)
Query: 26 VKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPI 85
+ G+Y ++ + +++ T EK + + + E+ +++DE H+L +P+RGPI
Sbjct: 223 LSGEYSVDVERVREADVWVATTEKFEAMCRASSLREALAEVACLIVDEIHLLGDPERGPI 282
Query: 86 LECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQ 145
LE ++++ + ++I +SAT+ N + ++ ++ RP+ +T V
Sbjct: 283 LEALLAR-MRGNDQVRIVGLSATVANADEIAAWLGARLVRVAWRPST----LTWQLPVIA 337
Query: 146 SFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRLQFDRFP 205
+ SL E + +LTG + Q L+FC SK AL + R
Sbjct: 338 THRDWSLVESARIRMANALTG-------MITQDGGSALVFCGSKRGVRRTALVIAGSRGV 390
Query: 206 GTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGT 265
T + + L E +E G L+ + H +R E+A+ A
Sbjct: 391 RTDGVHPDDLDRLYEVCREARIG----------LHYKGWDH-------KREAEKAFRARE 433
Query: 266 LQIICCTSTLAAGVNLPAQRVIIRDSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLC 325
+ ++ TST+AAGVNLPA+ VI++D+ VG + I + +QM GRAGR G E L
Sbjct: 434 IDVLVATSTVAAGVNLPARAVIVQDTEVGMNPIDVATVQQMFGRAGRVGHGERDGWAFLI 493
Query: 326 KTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTL 381
T Q+ R+ + + AG + S ++ +L D +L V SL + + TL
Sbjct: 494 VTEQERQRWQAKLVAG-NTVRSRIE-ASLPDHVLAEVVQRRIGSLREAEDWWLGTL 547
>gi|409721739|ref|ZP_11269897.1| ski2-like helicase [Halococcus hamelinensis 100A6]
gi|448722245|ref|ZP_21704783.1| ski2-like helicase [Halococcus hamelinensis 100A6]
gi|445789956|gb|EMA40629.1| ski2-like helicase [Halococcus hamelinensis 100A6]
Length = 741
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 175/679 (25%), Positives = 282/679 (41%), Gaps = 116/679 (17%)
Query: 15 EFKFYLEEYA---GVK-GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENR--IDEIGL 68
EF+ + E+Y GV G Y L I + T EK + SL++ ID++
Sbjct: 87 EFEAF-EQYGLTVGVSTGNYDSDGEWLATCDIIVATSEK----VDSLVRNGAPWIDDLSC 141
Query: 69 IVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVENS 128
+V DE H++++ RGP LE ++K+ +Q+ A+SATIGN L+ +++
Sbjct: 142 VVADEVHLVDDGNRGPTLEVTLAKLRQRNPGLQVVALSATIGNPEILAEWLDAELVDSTW 201
Query: 129 RPTKHSEYV---------TVDKRVFQSFDGKSLTE-IYADNLDYSLTGSGPDAVLHLVQG 178
RP + V ++R Q DG+ TE I D L+ GS
Sbjct: 202 RPIDLKKGVHYGQAVHLEDGNQRELQVRDGEKATEAIVRDTLNDG--GS----------- 248
Query: 179 NLMVLIFCSSKIACSNLALRLQFDRFPGT--KEYKKQEKEDLIEA---LKEENDGKLSTN 233
L+F +S+ A RL GT E +E+ L +++ +D + S +
Sbjct: 249 ---TLVFVNSRRNAEAAARRLA-----GTVENELTNEERTQLASVAAEIRDVSDTETSED 300
Query: 234 LEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYV 293
L + G A+HHA L + R L+E A+ L+++ T TLAAGVN P++RV++RD
Sbjct: 301 LASAVERGGAFHHAGLASEHRELVEGAFRDRLLKVVSATPTLAAGVNTPSRRVVVRDWRR 360
Query: 294 ------GRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLR-FSSMMNAGPEPIS 346
G +S+ QM GRAGR GL GE+++L K+ + F + PE +
Sbjct: 361 YSGEAGGMAPLSVLEVHQMCGRAGRPGLDPYGEALLLAKSHDELDELFDRYIWTDPEAVR 420
Query: 347 SHMDP-PTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQLKSP--------EDQQTFLET 397
S + P L +L VA+ SS E + + TL+ + +D +LE
Sbjct: 421 SKLAAEPALRTHLLATVASGFASSREGLLEFLDQTLYATQTTEGGRLERVTDDMLDYLE- 479
Query: 398 TLSEIVASLLASKGTMLTMNEAGH----LSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKL 453
V L G LT GH L L ++ A + GL +
Sbjct: 480 -----VNDFLERDGDDLTATSLGHTVSRLYLDPMSAAEIVDGL---------------QT 519
Query: 454 NFCLLNSLHMLFLVIPLEYRIPSDGILLSRSKVYDRYTKFHPQTLRVAEALGVTENLVAL 513
++L + LV R P L RS + YT + R E LG+ +
Sbjct: 520 AEDRPSALGLFHLV----SRTPDMYELYLRSGDREEYTMLANE--RETELLGMKPS---- 569
Query: 514 NVTGKLKDEKKALLCRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKV 573
+ + + L A +L D + + ++ Y + L+ ++ + S
Sbjct: 570 ----EFEARWEDWLSALKTARLLEDWASELDESEITDRYSVGPGDLRGKVDTAEWLLSAA 625
Query: 574 YRFCEELPELW--CYKQLLTDLPQTLMYCRAPNLRA-LMDLPGVK-IG--RARQLLNAGY 627
R EL W ++ T + A +R L+DL GV+ +G RAR+L AG
Sbjct: 626 ERLAGELGLEWAPAVREARTRV--------ANGIRTELIDLAGVRGVGRKRARRLYEAGI 677
Query: 628 SSLELIARADAKEMVAKIR 646
+ + AD ++ +R
Sbjct: 678 ETRTDLRNADKAVVLGALR 696
>gi|71019309|ref|XP_759885.1| hypothetical protein UM03738.1 [Ustilago maydis 521]
gi|46099683|gb|EAK84916.1| hypothetical protein UM03738.1 [Ustilago maydis 521]
Length = 2221
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 128/478 (26%), Positives = 216/478 (45%), Gaps = 76/478 (15%)
Query: 9 LAKAAEEFKFYLEEYAGV----KGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRID 64
+++ A F+ L+ Y V G TK Q+ + I + T EK + + +
Sbjct: 596 VSEQAANFRDRLQSYGIVVNELTGDSQLTKAQIAETQIIVTTPEKWDVISRKSTDTSYTN 655
Query: 65 EIGLIVIDEFHMLNEPQRGPILECVVSKVL----YLKKSIQIFAMSATIGNINALSTFIE 120
+ L++IDE H+L++ RGP+LE ++S+ + + +++ +SAT+ N ++TF+
Sbjct: 656 LVRLVIIDEIHLLHD-DRGPVLEAIISRTIRRMQQMNDPVRLVGLSATLPNYQDVATFLR 714
Query: 121 -----GITYVE-NSRPTK-HSEYVTV-DKRVFQSFDGKSLTEI-YADNLDYSLTGSGPDA 171
G+ Y E N RP EYV + +K+ + + EI Y LD +
Sbjct: 715 VNPKTGLFYFESNYRPCPLKQEYVGITEKKAIKRL--LIMNEITYEKTLDQA-------- 764
Query: 172 VLHLVQGNLMVLIFCSSKIACSNLALRLQ--------FDRF-PGTKEYKKQEKEDLIEAL 222
G VLIF S+ + A ++ +RF P + + E L
Sbjct: 765 ------GKNQVLIFVHSRKETAKTAKFIRDRAMEQDTLNRFLPPSPASQ--------EVL 810
Query: 223 KEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLP 282
+ E D + +L++ I YG HHA ++ +R L+E + G LQ++ T+TLA GVNLP
Sbjct: 811 RSELDNVVDGDLKDVIPYGFGIHHAGMSRLDRELVEALFADGHLQVLVSTATLAWGVNLP 870
Query: 283 AQRVIIRDSYV-----GR--DFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFS 335
A VII+ + + GR + +M QM+GRAGR GE I++ + +
Sbjct: 871 AHTVIIKGTQIYNPEKGRWCEITPQDML-QMLGRAGRPQFDTFGEGIIIT-NHSELQYYL 928
Query: 336 SMMNAGPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFY--QLKSP----- 388
S++N PI S + +L E+V + + E V L +T Y L+SP
Sbjct: 929 SLLNQQ-LPIESQLVSKLADNLNAEIVLGTIRNRDEAVAWL-GYTYLYVRMLRSPTLYSV 986
Query: 389 ----EDQQTFLETTLSEIV---ASLLASKGTMLTMNEAGHLSLTSIAKAAVQAGLSHD 439
+ FLE ++IV A+LL G + G+ + + + A ++HD
Sbjct: 987 TADYAEDDPFLEQKRADIVHTAAALLEKCGLLRYERRTGNFTSNELGRIASHYYITHD 1044
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 137/330 (41%), Gaps = 24/330 (7%)
Query: 21 EEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEP 80
+E G+ G+ R L + +CT E L Q + + L V D+ HM+ +
Sbjct: 1452 KEVVGLTGETSADLRLLEMADVVVCTPEHWDVLSRRWRQRKNVQNVALYVFDDIHMIGDL 1511
Query: 81 QRGPILECVVSKVLYL----KKSIQIFAMSATIGNINALSTFIEGIT-YVENSRPTKHSE 135
+ GP E V S+ ++ + S +I A+S + N L ++ + V N P+
Sbjct: 1512 RVGPTYEIVASRARFVAAQTQNSTRIIALSVPLANARDLGDWLGAPSGSVFNFAPSARQV 1571
Query: 136 YVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPD-AVLHLV----QGNLMVLIFCSSKI 190
+ V + F S+ A ++ D V+ V Q L + +
Sbjct: 1572 PMEVHIKTFNVAHFPSMMIAMAKPAYLAIIEHAEDQPVIAFVPSRKQAKLTADDLLAYVV 1631
Query: 191 ACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLT 250
A S+ R + G + E +DL L+ DG +L E + G+AY+H LT
Sbjct: 1632 ADSD---RADGESEDGESRFLNIEMDDLEPHLQRVQDG----DLRELLANGIAYYHEGLT 1684
Query: 251 AGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRD--SYVGRDF----ISLNMYK 304
+RR++E + A ++++ + A + L A V+I +Y GR+ L
Sbjct: 1685 RNDRRIVERLFSADAIRVVVASKETAWNIPLSAHLVLIMSLQTYEGREHRYVDYPLPDVL 1744
Query: 305 QMVGRAGRTGLQESGESIMLCK-TMQDFLR 333
QMVGR S ++LC+ T +D+ +
Sbjct: 1745 QMVGRCTVPNSHGSSRLVLLCQATRKDYFK 1774
>gi|398353823|ref|YP_006399287.1| ski2-type helicase [Sinorhizobium fredii USDA 257]
gi|390129149|gb|AFL52530.1| putative ski2-type helicase [Sinorhizobium fredii USDA 257]
Length = 1034
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 111/379 (29%), Positives = 173/379 (45%), Gaps = 33/379 (8%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V +K + K F + E G P R K I + T EK + L +L
Sbjct: 345 LVADKRRHFEKVYGGFGLRILEATGETDDISPLIR--GKYDIALLTYEKFAAL--ALAHP 400
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKS---IQIFAMSATIGNINALST 117
+ + + G IV+DE M+ +P RG LE +++ + ++ QI A+SA IG+ L
Sbjct: 401 HVLAQAGTIVVDEVQMIADPSRGANLEFILTLIKMRRREGIEPQIIALSAVIGDTGGLEA 460
Query: 118 FIEGITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIY--ADNLDYSLTGSGPDAVLHL 175
++ G + RP E + F+ D +E L S D ++ L
Sbjct: 461 WLGGRLLRRDERPVPLREGILRHDGSFRYIDPADGSEKIERGAAARMGLKDSAQDWIIPL 520
Query: 176 VQ----GNLMVLIFCSSKIACSNLA--LRLQFDRFPGTKEYKKQEKEDLIEALKEENDGK 229
++ V++F +K ++ L Q P T+ K+ + D +A K+
Sbjct: 521 IRKLAAAGEQVIVFRETKSESRHVGNYLAAQLGLPPATEAVKRMPRLDPSQAHKD----- 575
Query: 230 LSTNLEECILYGVAYHHADLTAGERRLIEEAYL--AGTLQIICCTSTLAAGVNLPAQRVI 287
L +L+ +GVA+H+ADL ER++IEE + L++I T+TLA GVN PA VI
Sbjct: 576 LIADLQ----HGVAFHNADLQPAERQVIEEEFRREGSGLRVISATTTLAMGVNTPANSVI 631
Query: 288 IRD-SYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAG-PEPI 345
I + G+ S+ YK +VGRAGR G E+G S +L +D AG PE +
Sbjct: 632 IVGLEHPGQVPYSIAEYKNLVGRAGRLGFAEAGTSYLLALNSRDEDYLWRRYVAGRPEDL 691
Query: 346 SSHM-----DPPTLVDLIL 359
SS DP +LV +L
Sbjct: 692 SSRFIAGNTDPRSLVLRVL 710
>gi|448507294|ref|ZP_21614912.1| DEAD/DEAH box helicase [Halorubrum distributum JCM 9100]
gi|448523808|ref|ZP_21618995.1| DEAD/DEAH box helicase [Halorubrum distributum JCM 10118]
gi|445698663|gb|ELZ50703.1| DEAD/DEAH box helicase [Halorubrum distributum JCM 9100]
gi|445700881|gb|ELZ52872.1| DEAD/DEAH box helicase [Halorubrum distributum JCM 10118]
Length = 666
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 103/387 (26%), Positives = 169/387 (43%), Gaps = 38/387 (9%)
Query: 28 GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE--NRIDEIGLIVIDEFHMLNEPQRGPI 85
G + T L + + T EK + S I+ + +DE+ +V+DE H+L +RGP
Sbjct: 97 GDFDATGEALAGNDVVVATSEK----VDSAIRNGASWVDELACVVVDEVHLLGAKRRGPT 152
Query: 86 LECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQ 145
LE ++ + +Q A+SAT+ N +A++ +++ RP + V V V
Sbjct: 153 LEVTLATLRRRNPELQTVALSATVDNPDAIADWLDAELVESEWRPVELRTGVAVGGEV-- 210
Query: 146 SFDGKSLTEIYADNLDYSL------------TGSGPDA----------VLHLVQGNLMVL 183
+FD + + D++ G DA V V L
Sbjct: 211 AFDDGTSLSVDVDSIADGADGEGDEGGDAGEVGDAGDANDPTEVTAALVADAVADGGQCL 270
Query: 184 IFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLST-NLEECILYGV 242
F S+ +LA RL D E ++ + DG L+ L +C+ GV
Sbjct: 271 AFVRSRREAVDLAERLADDGL--AAELGVEDAAAAAAEEATDVDGTLTGRQLADCLRAGV 328
Query: 243 AYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYV----GRDFI 298
A+HHA L +G R ++E A+ + IC T TLAAG+N+PA+RV++RD G +I
Sbjct: 329 AFHHAGLRSGHRGVVESAFRERDVACICATPTLAAGINVPARRVVVRDQRRYGEGGMSWI 388
Query: 299 SLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHM-DPPTLVDL 357
QM GRAGR GL GE++++ + PE + S + DP L
Sbjct: 389 PTLEVHQMCGRAGRPGLDPHGEAVLVADADTRDEVHERYVEGEPEAVESQLADPAALRTH 448
Query: 358 ILEVVAANLCSSLEDVKTLIKHTLFYQ 384
+L VA ++ ++ + + T + +
Sbjct: 449 VLAAVATGFAATESEILDVFEGTFYAR 475
>gi|448495659|ref|ZP_21610104.1| DEAD/DEAH box helicase [Halorubrum californiensis DSM 19288]
gi|445687752|gb|ELZ40027.1| DEAD/DEAH box helicase [Halorubrum californiensis DSM 19288]
Length = 752
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 105/385 (27%), Positives = 171/385 (44%), Gaps = 36/385 (9%)
Query: 28 GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENR--IDEIGLIVIDEFHMLNEPQRGPI 85
G + T L + + T EK + S I+ +DE+ +V+DE H+L +RGP
Sbjct: 77 GDFDATGEALAGNDVVVATSEK----VDSAIRNGASWVDELACVVVDEVHLLGAKRRGPT 132
Query: 86 LECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQ 145
LE ++ + +Q A+SAT+ N +A++ +++ + RP + V V V
Sbjct: 133 LEVTLATLRRRNPDLQTVALSATVDNPDAIADWLDAALVESDWRPVELRTGVAVGGEV-- 190
Query: 146 SFD-GKSLT-----EI--------------YADNLDYSLTGSGPDAVLHLVQGNLMVLIF 185
+FD G L+ E+ A+ D T V V L F
Sbjct: 191 AFDDGTGLSVDVDLEVSDDDGDGDEDDEVEAAEGEDLDPTEVTAALVADAVADGGQCLAF 250
Query: 186 CSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLST-NLEECILYGVAY 244
S+ +LA RL D E ++ + DG L+ L +C+ GVA+
Sbjct: 251 VRSRREAVDLAERLADDGL--AAELGVEDAAAAAAEEATDVDGTLTGRQLADCLRSGVAF 308
Query: 245 HHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYV----GRDFISL 300
HHA L +G R ++E A+ + IC T TLAAGVN+PA+RV++RD G +I
Sbjct: 309 HHAGLRSGHRAVVESAFRERDVACICATPTLAAGVNVPARRVVVRDQRRYGEGGMAWIPT 368
Query: 301 NMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHM-DPPTLVDLIL 359
QM GRAGR GL GE++++ + PE + S + DP L +L
Sbjct: 369 LEVHQMCGRAGRPGLDPHGEAVLVADADTRAEVHERYVEGEPEAVESQLADPAALRTHVL 428
Query: 360 EVVAANLCSSLEDVKTLIKHTLFYQ 384
+A + ++ ++ + + T + +
Sbjct: 429 AAIATDFAATESEILDVFEGTFYAR 453
>gi|403216751|emb|CCK71247.1| hypothetical protein KNAG_0G01900 [Kazachstania naganishii CBS
8797]
Length = 2130
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 107/389 (27%), Positives = 190/389 (48%), Gaps = 52/389 (13%)
Query: 23 YAGVK-----GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHML 77
Y GVK G K+++ + I + T EK + + + + ++ LI+IDE H+L
Sbjct: 605 YLGVKVAELTGDSRLNKQEIVQTHILVSTPEKWDIITRKMDESSYAQQVSLIIIDEVHLL 664
Query: 78 NEPQRGPILECVVSKVLYLKKS---IQIFAMSATIGNINALSTFI----EGITYVENS-R 129
++ RGP+LE +V++ ++ + S ++ A+SAT+ N ++ F+ EG+ + S R
Sbjct: 665 HD-ARGPVLENIVARTMFSRDSDVKPRLVALSATLPNYKDVARFLRVPAEGLFNFDASFR 723
Query: 130 PTKHSEYVTVDKRVFQSFDG-------KSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMV 182
P + Q F G K LT +Y + D VL ++ + V
Sbjct: 724 PCP----------LTQQFIGIREQNSLKKLTAMYE---------ACYDKVLESLKDHNQV 764
Query: 183 LIFCSSKIACSNLALRLQFDRFPGTKEYK--KQEKEDLIEALKEENDGKLSTNLEECILY 240
+IF S+ S A L+ ++F T + + ++E E L E++ +++L++ +
Sbjct: 765 IIFVHSRKETSRTASWLK-NKFTETSKLSLLRNQEEGSKEILTTESENIQNSSLKKVLES 823
Query: 241 GVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYV------G 294
G+ HHA L+ +R E+ + G L+++ CT+TLA GVNLPA VII+ + V G
Sbjct: 824 GIGIHHAGLSKQDRSTSEDLFADGLLRVLVCTATLAWGVNLPAHTVIIKGTDVYSPEKGG 883
Query: 295 RDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTL 354
D +S QM+GRAGR G+ I++ D + +++N PI S + +
Sbjct: 884 WDHLSAQDILQMLGRAGRPRYDTFGDGIVIT-NQSDIQYYLAVLNQQL-PIESQLISSLV 941
Query: 355 VDLILEVVAANLCSSLEDVKTLIKHTLFY 383
+ E+V+ N+ S +D + +T Y
Sbjct: 942 DSMNAEIVSGNI-QSRDDGTRWLTYTFLY 969
>gi|347966076|ref|XP_321605.3| AGAP001519-PA [Anopheles gambiae str. PEST]
gi|333470222|gb|EAA00850.3| AGAP001519-PA [Anopheles gambiae str. PEST]
Length = 2174
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 117/467 (25%), Positives = 224/467 (47%), Gaps = 59/467 (12%)
Query: 24 AGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRG 83
A + G + ++ Q+ + +CT EK + ++ + L++IDE H+L++ +RG
Sbjct: 597 AELTGDHQLSREQIAATQVIVCTPEKWDIITRKGGEKTYTQFVRLVIIDEIHLLHD-ERG 655
Query: 84 PILECVVSKVLY----LKKSIQIFAMSATIGNINALSTFIE-----GITYVENS-RPTK- 132
P+LE +V++ + ++ +++ +SAT+ N +STF+ G+ Y +NS RP
Sbjct: 656 PVLEALVARTIRNIETTQEDVRLVGLSATLPNYQDVSTFLRVRPETGLFYFDNSYRPVAL 715
Query: 133 HSEYVTV-DKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIA 191
+Y+ V +K+ + F + + +I + + + H + ++V + +
Sbjct: 716 EQQYIGVTEKKALKRF--QVMNDIVYEKV-----------MEHAGRNQVLVFVHSRKETG 762
Query: 192 CSNLALR---LQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHAD 248
+ A+R L+ D GT ++ +E L+ E + + L++ + YG A HHA
Sbjct: 763 KTARAIRDMCLEKDTL-GTF---LRDGSASMEVLRSEAEQVKNQELKDLLPYGFAIHHAG 818
Query: 249 LTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYV-----GRDFISLNMY 303
+T +R L+E+ + +Q++ T+TLA GVNLPA VII+ + V GR ++ L
Sbjct: 819 MTRVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQVYNPEKGR-WVELGAL 877
Query: 304 K--QMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEV 361
QM+GRAGR GE I++ + + S++N PI S + L D++
Sbjct: 878 DVLQMLGRAGRPQYDTKGEGILIT-NHSELQYYLSLLNQQL-PIESQL-ISKLPDMLNAE 934
Query: 362 VAANLCSSLEDVKTLIKHTLFY--QLKSPE---------DQQTFLETTLSEIV--ASL-L 407
+ +++D T + +T Y L+ P + LE ++++ A+L L
Sbjct: 935 IVLGTVQNVKDAVTWLGYTYLYIRMLRQPTLYGVSIDAVKEDPLLEQFRADLIHTAALHL 994
Query: 408 ASKGTMLTMNEAGHLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLN 454
G + ++GHL +T + + A +HD ++ Y LL L+
Sbjct: 995 ERSGLIKYDRKSGHLQVTEVGRIASHYYCTHD-TMLTYHQLLKPTLS 1040
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 86/333 (25%), Positives = 154/333 (46%), Gaps = 45/333 (13%)
Query: 39 KKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYL-- 96
K I + T +K L Q + + L ++DE ++ + GP+LE S++ Y+
Sbjct: 1452 KGQIIVTTADKWDVLSRRWKQRKNVQNVQLFIVDELQLIG-GEDGPVLEVACSRMRYISS 1510
Query: 97 --KKSIQIFAMSATIGNINALSTFIE-GITYVENSRPTKHSEYVTVDKRVFQSFDGKSLT 153
++ I+I A+SA++ + ++ ++ G N P+ + ++ V G ++T
Sbjct: 1511 QTEQPIRIIALSASLADARDIAQWLGCGTNATFNFHPSVRP--IPLELHV----QGLNIT 1564
Query: 154 EIYADNLDYSLTGSGP--DAVLHLVQGNLMVLIFCSSKIA-------CSNLALRLQFDRF 204
N S P +A+ +++ S K+A + A LQ +RF
Sbjct: 1565 H----NASRVAAMSKPVYNAITKFSPHKPVIVFVTSRKLARLTAIDVLTYCAAELQPNRF 1620
Query: 205 PGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAG 264
E+ED+ L D L+E + GVAY H LTA ++R++E+ + +G
Sbjct: 1621 ------FHAEEEDIKPFLDRMTD----KTLKETLSQGVAYMHEGLTAADQRIVEQLFDSG 1670
Query: 265 TLQIICCTSTLAAGVNLPAQRVIIRDS--YVGR----DFISLNMYKQMVGRAGRTGLQES 318
+QI CT L +N+ A VII D+ Y GR D + QM+GRA R +
Sbjct: 1671 AVQIAICTRDLCWALNISAHLVIIMDTQFYNGRNHTYDDYPITDVLQMIGRANRPLEDDD 1730
Query: 319 GESIMLCK-TMQDFLRFSSMMNAGPEPISSHMD 350
+++++C+ + +DF + +N P P+ SH+D
Sbjct: 1731 AKAVLMCQSSKKDF--YKKFLNE-PLPVESHLD 1760
>gi|170087388|ref|XP_001874917.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650117|gb|EDR14358.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 1094
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 117/421 (27%), Positives = 192/421 (45%), Gaps = 59/421 (14%)
Query: 41 SIYICTIEKGSKLIGSLIQENRI-DEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKS 99
SI I T EK L + ++I + L ++DE H+LNE RG LE + S++
Sbjct: 289 SIIIATAEKWDSLTRNWRDHSQILSRVHLFLVDEVHILNE-SRGSTLEVITSRMKMRGSC 347
Query: 100 IQIFAMSATIGNINALSTFIEG----------ITYVENSRPTKHSEYVTVDKRVFQSFDG 149
++ +SAT+ NI ++++I + E RP K + +V R + D
Sbjct: 348 MRFVLVSATVPNIQDVASWIGNGSDVASPAKVFEFGEEFRPCKLTRHVIGVPRRKEHNDF 407
Query: 150 KSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRLQFDRFPGTKE 209
+ +A LDY L +VL +L+FCS++ + A +L KE
Sbjct: 408 Q-----FAKMLDYKLF-----SVLQQYSVGKPILVFCSTRKGVFDTAEQLM-------KE 450
Query: 210 YKKQEKEDLIEALKEENDGKLSTN-------LEECILYGVAYHHADLTAGERRLIEEAYL 262
+ + E++ L L L+T L E + YG+ HHA + +RR IE+ YL
Sbjct: 451 FVETEQKKL--TLPWSRPPGLTTFGTSLKLILSELVKYGIGVHHAGINLDDRRTIEDLYL 508
Query: 263 AGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGRDFISLNMYK----QMVGRAGRTGLQES 318
+L+I+ TSTLA GVNLPA V+I+ ++ S+ QM+GRAGR +
Sbjct: 509 RKSLRILVATSTLAVGVNLPAHMVVIKGVRTFQNNASVEYSDLDIVQMLGRAGRPQFDKD 568
Query: 319 GESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKTLIK 378
G +I++C+ +D + G + S + TL + I + + LE K+ ++
Sbjct: 569 GIAIIMCE--KDLEGKYEALVQGKNVLESSLH-LTLSEHINSEIDLGTITDLESAKSWLR 625
Query: 379 HTLFYQ--LKSP-------EDQQTFLETTLSEIVASLLASKGTMLTM-----NEAGHLSL 424
+ +Q K+P ED QT+ E ++ S++ + T L EAG L+
Sbjct: 626 GSFLFQRIRKNPNFYALGKEDDQTWQERVDDVVMRSVMKLRDTHLVSYIDKGAEAGKLTC 685
Query: 425 T 425
T
Sbjct: 686 T 686
>gi|327356501|gb|EGE85358.1| DEAD/DEAH box DNA helicase [Ajellomyces dermatitidis ATCC 18188]
Length = 1630
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 101/372 (27%), Positives = 170/372 (45%), Gaps = 53/372 (14%)
Query: 35 RQLNKKSIYICTIEKGSKLIGSLIQENRIDE-IGLIVIDEFHMLNEPQRGPILECVVSKV 93
R + +I I T EK + ++ + + L +IDE H+L E RG LE VVS++
Sbjct: 376 RNVQNANIVITTPEKWDSMTRKWKDHIKLMQLVKLFLIDEVHILKE-TRGATLEAVVSRM 434
Query: 94 LYLKKSIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSFDGKSLT 153
+ +++ A+SAT+ N + ++ PT S+++ + F G+
Sbjct: 435 KSVDSNVRFVALSATVPNSEDIGAWL-------GKDPT--SQHLPAHRERF----GEEFR 481
Query: 154 EIYADNLDYSLTGSGPD-AVLHLVQGNLM-----------VLIFC---SSKIACSNLALR 198
+ Y G+G D A +G L ++IFC +S IA S +
Sbjct: 482 PVKLQKFVYGYQGNGNDFAFDKACEGRLPEVMEKHSKKKPIMIFCCTRNSAIATSKYLGK 541
Query: 199 LQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIE 258
L P + + K +++ + L I GVA+HHA L A +R +E
Sbjct: 542 LWTSTNPPRRLWSGPTKPVVVQ----------NPELRATISTGVAFHHAGLDASDRHAVE 591
Query: 259 EAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGRD-----FISLNMYKQMVGRAGRT 313
+L+G + +ICCTSTLA GVNLP VII+++ +D + L M QM+GRAGR
Sbjct: 592 SGFLSGQINVICCTSTLAVGVNLPCHLVIIKNTVSWQDNCCKEYPDLEMM-QMLGRAGRP 650
Query: 314 GLQESGESIMLCKTMQDFLRFSSMMNAGPEPISS--HMDPPTLVDLILEVVAANLCSSLE 371
+S +++L T ++ + + AG EP+ S H++ L+D + + + +E
Sbjct: 651 QFDDSAVAVIL--TRKERVNHYEKLVAGTEPLESCLHLN---LIDHLNAEIGLGTVTGVE 705
Query: 372 DVKTLIKHTLFY 383
+ T F+
Sbjct: 706 SAVRWLTGTFFF 717
>gi|356516857|ref|XP_003527109.1| PREDICTED: activating signal cointegrator 1 complex subunit 3
[Glycine max]
Length = 2088
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 114/402 (28%), Positives = 190/402 (47%), Gaps = 44/402 (10%)
Query: 28 GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILE 87
G Y P L +I I T EK + + + + ++GL+++DE H+L RGPILE
Sbjct: 1370 GDYTPDLTALLSANIIISTPEKWDGISRNWHSRSYVTKVGLMILDEIHLLGA-DRGPILE 1428
Query: 88 CVVSKVLYL----KKSIQIFAMSATIGNINALSTFIEGITYVE--NSRPTKHSEYVTVDK 141
+VS++ Y+ +++++ +S + N L+ ++ G+ + N +P+ + V
Sbjct: 1429 VIVSRMRYISSQTERAVRFVGLSTALANAGDLADWL-GVEEIGLFNFKPSVRPVPLEVH- 1486
Query: 142 RVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRLQF 201
Q + GK Y ++ S+ A+ VLIF SS+ AL L
Sbjct: 1487 --IQGYPGK----YYCPRMN-SMNKPAYAAICTHSPAK-PVLIFVSSRRQTRLTALDLI- 1537
Query: 202 DRFPGTKEYKKQ----EKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLI 257
+F + E +Q +E L L + +D NL + +G+ HHA L +R L+
Sbjct: 1538 -QFAASDEQSRQFLNLPEETLQMVLSQVSD----LNLRHTLQFGIGLHHAGLNDKDRSLV 1592
Query: 258 EEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS--YVGR-----DFISLNMYKQMVGRA 310
EE + +QI+ CTSTLA GVNLPA VII+ + Y G+ DF ++ QM+GRA
Sbjct: 1593 EELFANNKIQILVCTSTLAWGVNLPAHLVIIKGTEYYDGKAKRYVDFPITDIL-QMMGRA 1651
Query: 311 GRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAANLCSSL 370
GR + G++++L + F P P+ S + + E+++ +C
Sbjct: 1652 GRPQFDQHGKAVILVHEPKK--SFYKKFLYEPFPVESSLREQLHDHINAEIISGTICHKQ 1709
Query: 371 EDVKTLIKHTLFYQLK-SP-----EDQQT-FLETTLSEIVAS 405
+ V L LF +L +P ED ++ FL T LS +V +
Sbjct: 1710 DAVHYLTWTYLFRRLMVNPAYYGLEDAESEFLNTYLSSLVQT 1751
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 87/303 (28%), Positives = 145/303 (47%), Gaps = 36/303 (11%)
Query: 66 IGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKS----IQIFAMSATIGNINALSTFIE- 120
+ L++IDE H+LN+ RGP++E +V++ L +S I+I +SAT+ N ++ F+
Sbjct: 567 VKLLIIDEVHLLND-DRGPVIEALVARTLRQVESTQTMIRIVGLSATLPNYLEVAQFLRV 625
Query: 121 ----GITYVENS-RPTK-HSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLH 174
G+ + ++S RP +Y+ + + F + + E+ D + S
Sbjct: 626 NPDTGLFFFDSSYRPVPLAQQYIGISEPNFAARN-----ELLNDICYTKIADS------- 673
Query: 175 LVQGNLMVLIFCSSKIACSNLALRL-QFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTN 233
L QG+ ++F S+ + A +L + R E +K+E + +
Sbjct: 674 LRQGH-QAMVFVHSRKDTAKTADKLVELARRNEDFELFSNNTHPQYTFMKKEVIKSRNKD 732
Query: 234 LEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIR---- 289
L + YGV HHA + +R L E + G L+++ CT+TLA GVNLPA V+I+
Sbjct: 733 LVQLFEYGVGVHHAGMLRADRGLTERLFSDGLLKVLVCTATLAWGVNLPAHTVVIKGTQL 792
Query: 290 -DSYVG--RDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPIS 346
D G RD L++ Q+ GRAGR +SGE I++ T D L + + PI
Sbjct: 793 YDPKAGGWRDLGMLDVM-QIFGRAGRPQFDKSGEGIII--TSHDKLAYYLRLLTSQLPIE 849
Query: 347 SHM 349
S
Sbjct: 850 SQF 852
>gi|453082408|gb|EMF10455.1| P-loop containing nucleoside triphosphate hydrolase protein
[Mycosphaerella populorum SO2202]
Length = 1468
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 108/379 (28%), Positives = 174/379 (45%), Gaps = 45/379 (11%)
Query: 35 RQLNKKSIYICTIEKGSKLIGSLIQENR-IDEIGLIVIDEFHMLNEPQRGPILECVVSKV 93
R + SI I T EK + I + L +IDE H+L E RGP LE VVS++
Sbjct: 309 RNVQHASIIITTPEKWDSTTRKWKDHQKLIQMVKLFLIDEVHILKE-DRGPTLEAVVSRM 367
Query: 94 LYLKKSIQIFAMSATIGNINALSTFIEGIT-----------YVENSRPTKHSEYVTVDKR 142
+ ++ A+SAT+ N ++T++ + + E RP + ++V +
Sbjct: 368 KSVGSDVRFVALSATVPNSQDIATWLGKDSMHPDIPSPREKFGEEFRPVRLQKHVCGYQS 427
Query: 143 VFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLA-LRLQF 201
F + L LD LT D ++ Q +++FC ++ +C A L +
Sbjct: 428 DSNDFGFEKL-------LDSKLT----DVIIKWSQ-RKPIMVFCMTRKSCLGTAQLLANW 475
Query: 202 DRFPGTKE-YKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEA 260
G+++ Y + ++ KE L E GVA+HHA L+ +R +E+
Sbjct: 476 WASKGSRDRYWSAPRSRVVVGDKE---------LRETAASGVAFHHAGLSLEDRNAVEKG 526
Query: 261 YLAGTLQIICCTSTLAAGVNLPAQRVIIR------DSYVGRDFISLNMYKQMVGRAGRTG 314
YL G + +ICCTSTLA GVNLP VII+ +S G S QM+GRAGR
Sbjct: 527 YLTGEISVICCTSTLAVGVNLPCHMVIIKGTVGYQNSNAGAKEYSDLETMQMLGRAGRPQ 586
Query: 315 LQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAANLCSSLEDVK 374
+S ++++ + + + F M AG E + S + + L E+ + S+ K
Sbjct: 587 FDDSAVAVIMTRLAR--VPFYEKMVAGTEVLESCLHQHLIDHLNAEIGLGTVTSASTAKK 644
Query: 375 TLIKHTLFYQLK-SPEDQQ 392
L+ L+ +LK +PE Q
Sbjct: 645 WLMSTFLYVRLKDNPEHYQ 663
>gi|346979301|gb|EGY22753.1| pre-mRNA-splicing factor brr2 [Verticillium dahliae VdLs.17]
Length = 2213
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 126/508 (24%), Positives = 234/508 (46%), Gaps = 62/508 (12%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V E+ + K E + + E G + TK Q+ + I + T EK +
Sbjct: 597 LVQEQVGNFGKRLEPYGVKVSELTGDRQL---TKAQIAETQIIVTTPEKWDVITRKATDI 653
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVL----YLKKSIQIFAMSATIGNINALS 116
+ + + LI+IDE H+L++ RGP+LE ++S+ + + +++ +SAT+ N ++
Sbjct: 654 SYTNLVRLIIIDEIHLLHD-DRGPVLESIISRTIRKTEQTGEPVRLIGLSATLPNYRDVA 712
Query: 117 TFI-----EGITYVENS-RPTK-HSEYVTV-DKRVFQSFDGKSLTEIYADNLDYSLTGSG 168
+F+ +G+ + + S RP E++ V D++ + K++ ++ + +
Sbjct: 713 SFLRVDPTKGLFHFDGSYRPCPLRQEFIGVTDRKAIKQL--KTMNDVTYNKV-------- 762
Query: 169 PDAVLHLVQGNLMVLIFCSSKIACSNLA--LR---LQFDRFPGTKEYKKQEKEDLIEALK 223
+ H+ +LIF S+ + A +R L+ D + +E L EA
Sbjct: 763 ---MEHVGTNRNQMLIFVHSRKETAKTARYIRDKALEMDTINNILRHDAGSREVLNEASS 819
Query: 224 EENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPA 283
+ D +L ++ + YG HHA ++ +R +E+ + G +Q++ CT+TLA GVNLPA
Sbjct: 820 QATDKEL----KDLLPYGFGIHHAGMSRIDRTDVEDLFARGAIQVLVCTATLAWGVNLPA 875
Query: 284 QRVIIRDSYV----GRDFISLNMYK--QMVGRAGRTGLQESGESIMLCKTMQDFLRFSSM 337
VII+ + + ++ L+ QM+GRAGR GE I++ T + + S+
Sbjct: 876 HSVIIKGTQIYSPEKGSWVELSPQDVLQMLGRAGRPQFDTYGEGIIIT-TQNEIQYYLSL 934
Query: 338 MNAGPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQ-LKSP-------- 388
+N PI S M + +L E+V N+ S E V+ L LF + L+SP
Sbjct: 935 LNQQ-LPIESQMVSKLVDNLNAEIVLGNVRSRDEGVEWLGYSYLFVRMLRSPGLYQVGAE 993
Query: 389 -EDQQTFLETTLSEI--VASLLASKGTMLTMNEAGHLSLTSIAKAAVQAGLSHDVCLIIY 445
ED + + + I AS+L + + G L T + + A ++H + Y
Sbjct: 994 YEDDEALEQKRVDLIHSAASVLRKSNLVKYDEKTGKLQATELGRIASHYYITHG-SMETY 1052
Query: 446 SDLLH---NKLNFCLLNSLHMLFLVIPL 470
++L+ + + SL F IP+
Sbjct: 1053 NNLIQPSITTIELFRVFSLSAEFKYIPV 1080
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 67/339 (19%), Positives = 146/339 (43%), Gaps = 38/339 (11%)
Query: 63 IDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKS----IQIFAMSATIGNINALSTF 118
+ ++ L + DE H+L G I E +VS++ Y++ ++I A+S ++ N L +
Sbjct: 1504 VQKVALFIADEIHLLGG-SMGYIYEVIVSRMHYIRMQTELPMRIVALSVSLANARDLGEW 1562
Query: 119 IEGITY-VENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAV-LHLV 176
I+ + + N P H V ++ + QSF+ + L + P + ++ +
Sbjct: 1563 IDAKKHDIYNFSP--HVRPVPLELHI-QSFNTPHFPSLM-------LAMAKPTYLAINQM 1612
Query: 177 QGNLMVLIFCSSKIACSNLALRLQFDRFPGTKEYK-----KQEKEDLIEALKEENDGKLS 231
+ ++F S+ L F E + ++ + L++ + EE
Sbjct: 1613 SADKPAIVFVPSRKQTRATTRDLLAACFADDDEDRFLHADAEQMKPLLDKIDEEA----- 1667
Query: 232 TNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS 291
L E + +G+ Y+H L+ ++R+++ Y G +Q++ + + ++ A VI+ +
Sbjct: 1668 --LAEALSHGIGYYHEALSLSDKRIVKHLYNHGAIQVLVASRDVCWELSCTAHLVIVMGT 1725
Query: 292 --YVGRDF----ISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPI 345
+ GR+ SL+ M G+A + G +++ ++ + +N P+
Sbjct: 1726 QYFEGREHRYVDYSLSEVLHMFGKALQPSKDGRGRGVLMVPGVKREF-YKKFLNEA-LPV 1783
Query: 346 SSHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQ 384
SH+ L D + ++ L ++ ED T FY+
Sbjct: 1784 ESHLH-NYLHDAFVTEISTRLITNGEDAINWTTFTYFYR 1821
>gi|302414418|ref|XP_003005041.1| pre-mRNA-splicing helicase BRR2 [Verticillium albo-atrum VaMs.102]
gi|261356110|gb|EEY18538.1| pre-mRNA-splicing helicase BRR2 [Verticillium albo-atrum VaMs.102]
Length = 2194
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 127/508 (25%), Positives = 234/508 (46%), Gaps = 62/508 (12%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V E+ + K E + + E G + TK Q+ + I + T EK +
Sbjct: 597 LVQEQVGNFGKRLEPYGVKVSELTGDRQL---TKAQIAETQIIVTTPEKWDVITRKATDI 653
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVL----YLKKSIQIFAMSATIGNINALS 116
+ + + LI+IDE H+L++ RGP+LE ++S+ + + +++ +SAT+ N ++
Sbjct: 654 SYTNLVRLIIIDEIHLLHD-DRGPVLESIISRTIRKTEQTGEPVRLIGLSATLPNYRDVA 712
Query: 117 TFI-----EGITYVENS-RPTK-HSEYVTV-DKRVFQSFDGKSLTEIYADNLDYSLTGSG 168
+F+ +G+ + + S RP E++ V D++ + K++ ++ + +
Sbjct: 713 SFLRVDPTKGLFHFDGSYRPCPLRQEFIGVTDRKAIKQL--KTMNDVTYNKV-------- 762
Query: 169 PDAVLHLVQGNLMVLIFCSSKIACSNLA--LR---LQFDRFPGTKEYKKQEKEDLIEALK 223
+ H+ +LIF S+ + A +R L+ D + +E L EA
Sbjct: 763 ---MEHVGTNRNQMLIFVHSRKETAKTARYIRDKALEMDTINNILRHDAGSREVLNEASS 819
Query: 224 EENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPA 283
+ D +L ++ + YG HHA ++ +R +E+ + G +Q++ CT+TLA GVNLPA
Sbjct: 820 QATDKEL----KDLLPYGFGIHHAGMSRIDRTDVEDLFARGAIQVLVCTATLAWGVNLPA 875
Query: 284 QRVIIRDSYV----GRDFISLNMYK--QMVGRAGRTGLQESGESIMLCKTMQDFLRFSSM 337
VII+ + + ++ L+ QM+GRAGR GE I++ T + + S+
Sbjct: 876 HSVIIKGTQIYSPEKGSWVELSPQDVLQMLGRAGRPQFDTYGEGIIIT-TQNEIQYYLSL 934
Query: 338 MNAGPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQ-LKSP-------- 388
+N PI S M + +L E+V N+ S E V+ L LF + L+SP
Sbjct: 935 LNQQ-LPIESQMVSKLVDNLNAEIVLGNVRSRDEGVEWLGYSYLFVRMLRSPGLYQVGAE 993
Query: 389 -EDQQTFLETTLSEI--VASLLASKGTMLTMNEAGHLSLTSIAKAAVQAGLSHDVCLIIY 445
ED + + + I AS+L + + G L T + + A ++H + Y
Sbjct: 994 YEDDEALEQKRVDLIHSAASVLRKSNLVKYDEKTGKLQATELGRIASHYYITHG-SMETY 1052
Query: 446 SDLLHNKLNFCLL---NSLHMLFLVIPL 470
++L+ + L SL F IP+
Sbjct: 1053 NNLIQPSITTIELFRVFSLSAEFKYIPV 1080
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 68/334 (20%), Positives = 144/334 (43%), Gaps = 50/334 (14%)
Query: 63 IDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKS----IQIFAMSATIGNINALSTF 118
+ ++ L + DE H+L G I E +VS++ Y++ ++I A+S ++ N L +
Sbjct: 1504 VQKVALFIADEIHLLGG-SMGYIYEVIVSRMHYIRMQTELPMRIVALSVSLANARDLGEW 1562
Query: 119 IEGITY-VENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQ 177
I+ + + N P H V ++ + QSF+ T P +L + +
Sbjct: 1563 IDAKKHDIYNFSP--HVRPVPLELHI-QSFN----------------TPHFPSLMLAMAK 1603
Query: 178 GNLMVLIFCSSKIACSNLALRL-QFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEE 236
+ + ++++ A+ + + D E K L++ + EE L E
Sbjct: 1604 PTYLAI----NQMSADKPAIMMTKIDFLHADAEQMKP----LLDKIDEEA-------LAE 1648
Query: 237 CILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS--YVG 294
+ +G+ Y+H L+ ++R+++ Y G +Q++ + + +N A VI+ + + G
Sbjct: 1649 TLSHGIGYYHEALSLSDKRIVKHLYNHGAIQVLVASRDVCWELNCTAHLVIVMGTQYFEG 1708
Query: 295 RDF----ISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMD 350
R+ SL+ M G+A + G +++ ++ + +N P+ SH+
Sbjct: 1709 REHRYVDYSLSEVLHMFGKALQPSKDGRGRGVLMVPGVKREF-YKKFLNEA-LPVESHLH 1766
Query: 351 PPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQ 384
L D + ++ L ++ ED T FY+
Sbjct: 1767 -NYLHDAFVTEISTRLITNGEDAINWTTFTYFYR 1799
>gi|412987960|emb|CCO19356.1| predicted protein [Bathycoccus prasinos]
Length = 2267
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 132/515 (25%), Positives = 234/515 (45%), Gaps = 67/515 (13%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V E +L++ ++F + E + G +K ++ I + T EK +
Sbjct: 605 LVAEVVGNLSERLKDFGVNVRE---LTGDVSMSKAEIEDTQIIVSTPEKWDIITRKSGDR 661
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLY----LKKSIQIFAMSATIGNINALS 116
+ L+++DE H+L++ RGP+LE ++++ + +K ++ +SAT+ N + ++
Sbjct: 662 AYTQSVSLLIVDEVHLLHD-GRGPVLESIIARTIRQVEETRKHVRFVGLSATLPNYDDVA 720
Query: 117 TFI-----EGITYVENS-RPTK-HSEYVTVD-KRVFQSFDGKSLTEIYADNLDYSLTGSG 168
F +G+ +NS RP S+++ + K+ Q F + + E+ + +D
Sbjct: 721 AFARVDHGKGLFVFDNSYRPCPLQSQFIGITVKKPLQRF--QLMNEVCYEKVDEQ----- 773
Query: 169 PDAVLHLVQGNLMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLI--EALKEEN 226
G V++F S+ A L+ D + K D E L++E+
Sbjct: 774 --------AGQTQVMVFVHSRKETYKTAKALR-DMAIENETIGKYVGSDTATAEILRQES 824
Query: 227 DGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRV 286
+ S +L+E + YG A HHA + +R L+EE + G +Q++ T+TLA GVNLPA V
Sbjct: 825 ENVKSNDLKELLRYGFAIHHAGMVRADRTLVEELFADGHIQVLVSTATLAWGVNLPAHTV 884
Query: 287 IIRDSYV------GRDFISLNMYKQMVGRAGRTGLQESGESIMLCK--TMQDFLR-FSSM 337
II+ + V G D +S QM+GRAGR GE I++ + +Q +L F+
Sbjct: 885 IIKGTQVYNPEKGGWDELSFQDVMQMMGRAGRPQFDTFGEGIIITQHTELQYYLSLFNQQ 944
Query: 338 MNAGPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQ-LKSP-------- 388
+ PI S L E+V ++ S + VK L LF + L++P
Sbjct: 945 L-----PIESQFVAKLADSLNAEIVLGSIASVDDAVKWLGYTYLFVRMLRNPVLYGVPRS 999
Query: 389 --EDQQTFLETTLSEIV--ASLLASKGTMLTMNE-AGHLSLTSIAKAAVQAGLSHDVCLI 443
ED T L + +++V A+L K ++ ++ G L T + + A Q +SH
Sbjct: 1000 AVEDDPT-LSSRRADLVHSAALSLDKAGLIRYDKRGGGLQATDLGRIASQYYVSHGTVKA 1058
Query: 444 IYSDL--LHNKLNFCLLNSL--HMLFLVIPLEYRI 474
+ L + C L SL F+ + E +I
Sbjct: 1059 FHEHLKPQMGDIELCRLFSLAEEFKFVTVRQEEKI 1093
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 63/354 (17%), Positives = 136/354 (38%), Gaps = 58/354 (16%)
Query: 37 LNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYL 96
L + + + + + L Q + ++ L + D H++ G +E S++ Y+
Sbjct: 1483 LERSRVIVSSAKNWDILSRRWKQRKNVQKVKLFIADALHLIGGAH-GATIEVACSRMRYV 1541
Query: 97 ---------------------KKS---IQIFAMSATIGNINALSTFI-----EGITYVEN 127
KKS I+I +SA++ N L+ ++ + +
Sbjct: 1542 SVQKQREEEEDEEEEGTKKDGKKSAPPIRILGLSASVANAKDLAEWLGVNSKRQFNFAPS 1601
Query: 128 SRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCS 187
+RPT +V R F + +S + +++ A+ + ++F
Sbjct: 1602 ARPTPLRLFV----RGFDVVNYESRVQ--------AMSRPTYRAIKTHCEKKEPAIVFAP 1649
Query: 188 SKIACSNLALRLQF----DRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVA 243
++ AL L D G E E+++E L E+ + ++ + +G+A
Sbjct: 1650 TRKHAKQRALELLSYALNDNDEGYFRNVSSEDENVLEQLSEKIES--DAGVKHAMTFGIA 1707
Query: 244 YHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYV-------GRD 296
H L+ E+ + A+ ++ C + + A+ V++ + + D
Sbjct: 1708 VIHEGLSKVEKEALFLAFECNACSLMICEAASVWTLRQKAKLVVVSGTQLYDAGGSSAAD 1767
Query: 297 FISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMD 350
+ +++ QM + GR G+ E G +++C Q + S P P+ SH+D
Sbjct: 1768 YPVVDVL-QMTAKCGRPGVDEHGTCVLMCS--QPKKAYYSKFLHEPFPVESHLD 1818
>gi|338710684|ref|XP_001915703.2| PREDICTED: LOW QUALITY PROTEIN: activating signal cointegrator 1
complex subunit 3-like [Equus caballus]
Length = 2202
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 109/397 (27%), Positives = 184/397 (46%), Gaps = 51/397 (12%)
Query: 14 EEFKFYLEEYAGVK-----GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGL 68
+++K +EE G K G P + + K + + T EK + S N + ++ +
Sbjct: 1390 DDWKVRIEEKLGKKVIELTGDVTPDMKSIAKADLIVTTPEKWDGVSRSWQNRNYVKQVTI 1449
Query: 69 IVIDEFHMLNEPQRGPILECVVSKVLYL----KKSIQIFAMSATIGNINALSTFIE---- 120
++IDE H+L E +RGP+LE +VS+ ++ +K ++I +S + N L+ ++
Sbjct: 1450 LIIDEIHLLGE-ERGPVLEVIVSRTNFISSHTEKPVRIVGLSTALANARDLADWLNIHQM 1508
Query: 121 GITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNL 180
G+ N RP+ + V Q F G+ A S+ A+
Sbjct: 1509 GLF---NFRPSVRPVPLEVH---IQGFPGQHYCPRMA-----SMNKPTFQAIRSHSPAK- 1556
Query: 181 MVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQ-------EKEDLIEALKEENDGKLSTN 233
VLIF SS+ AL L F T+E KQ E ED+I L++ +N
Sbjct: 1557 PVLIFVSSRRQTRLTALELI--AFLATEEDPKQWLNMDEREMEDIIGTLRD-------SN 1607
Query: 234 LEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS-- 291
L+ + +G+ HHA L +R+ +EE ++ +Q++ TSTLA GVN PA VII+ +
Sbjct: 1608 LKLTLAFGIGMHHAGLHERDRKTVEELFVNCKVQVLIATSTLAWGVNFPAHLVIIKGTEY 1667
Query: 292 YVG--RDFISLNMYK--QMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISS 347
Y G R ++ + QM+GRAGR + G++++L ++ F P P+ S
Sbjct: 1668 YDGKTRRYVDFPITDVLQMMGRAGRPQFDDQGKAVILVHDIKK--DFYKKFLYEPFPVES 1725
Query: 348 HMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQ 384
+ L D + +A +S +D I T F++
Sbjct: 1726 SL-LGVLSDHLNAEIAGGTITSKQDAMDYITWTYFFR 1761
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 102/380 (26%), Positives = 176/380 (46%), Gaps = 56/380 (14%)
Query: 33 TKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEI-GLIVIDEFHMLNEPQRGPILECVVS 91
+K ++ + + + T EK + + + + +I L+++DE H+L+E RGP+LE +V+
Sbjct: 571 SKSEILRTQMLVTTPEKWDVVTRKSVGDVALSQIVKLLILDEVHLLHE-DRGPVLESIVA 629
Query: 92 KVLYLKKS----IQIFAMSATIGNINALSTFIE-----GITYVENS-RPTKHSEYVTVDK 141
+ L +S I+I +SAT+ N ++TF+ G+ Y + RP
Sbjct: 630 RTLRQVESTQSMIRILGLSATLPNYLDVATFLHVNPCIGLFYFDGRFRPVP--------- 680
Query: 142 RVFQSFDG-KSLTEIYA-DNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRL 199
+ Q+F G KS ++ +N+D ++VL V+ V++F ++ A A+ L
Sbjct: 681 -LGQTFLGVKSANKVQQLNNMDEVCY----ESVLKQVKAGHQVMVFVHARNATVRTAMSL 735
Query: 200 --------QFDRFPGTK--EYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADL 249
Q F ++ EY EK+ K N + E G + HHA +
Sbjct: 736 IERAKNNGQISCFLPSQGPEYGHAEKQ----VQKSRN-----KQVRELFPEGFSIHHAGM 786
Query: 250 TAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS--YVGR--DFISLNMYK- 304
+R L+E + G ++++ CT+TLA GVNLPA VII+ + Y + F+ L +
Sbjct: 787 LRQDRNLVENLFSNGHIKVLVCTATLAWGVNLPAHAVIIKGTQIYAAKRGSFVDLGILDV 846
Query: 305 -QMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVA 363
Q+ GRAGR GE I++ T D L + PI S +L D + +A
Sbjct: 847 MQIFGRAGRPQFDRFGEGIII--TTHDKLSHYLTLLTQQNPIESQF-LESLADNLNAEIA 903
Query: 364 ANLCSSLEDVKTLIKHTLFY 383
+++E+ I +T Y
Sbjct: 904 LGTVTNVEEAVKWISYTYLY 923
>gi|196015823|ref|XP_002117767.1| hypothetical protein TRIADDRAFT_51100 [Trichoplax adhaerens]
gi|190579652|gb|EDV19743.1| hypothetical protein TRIADDRAFT_51100 [Trichoplax adhaerens]
Length = 2140
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 114/449 (25%), Positives = 214/449 (47%), Gaps = 61/449 (13%)
Query: 28 GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILE 87
G + +K Q++K + +CT EK + + + L++IDE H+L++ RGP+LE
Sbjct: 570 GDHQLSKEQMDKAQVIVCTPEKWDIITRKSGDRSFAQFVSLVIIDEIHLLHD-DRGPVLE 628
Query: 88 CVVSKVL----YLKKSIQIFAMSATIGNINALSTFI-----EGITYVENS-RPTK-HSEY 136
+V++ + K+ +++ +SAT+ N ++TF+ +G+ + +NS RP +Y
Sbjct: 629 AIVARTIRQIEMTKEIVRLVGLSATLPNYEDVATFLRVKPSKGLFFFDNSFRPVPLEQKY 688
Query: 137 VTV-DKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNL 195
+ + +K+ + F +++ +I D + + H + ++V + + +
Sbjct: 689 IGITEKKPLKRF--QAMNDIVYDKV-----------IEHAGKNQVLVFVHSRKETGKTAR 735
Query: 196 ALR---LQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAG 252
A+R L+ D T +E E L+ E D + L+E + YG A HHA +T
Sbjct: 736 AIRDLCLEKD----TIGKFLREDSASTEILRTEADQVKNNELKELLPYGFAIHHAGMTRV 791
Query: 253 ERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYV-----GRDFISLNMYK--Q 305
+R L+E+ + +Q++ T+TLA GVNLPA VII+ + + GR ++ L+ Q
Sbjct: 792 DRTLVEDLFADKHVQVLISTATLAWGVNLPAHTVIIKGTQIYNPEKGR-WVELSALDVLQ 850
Query: 306 MVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAAN 365
M+GRAGR GE I++ + + S++N PI S L E+V
Sbjct: 851 MLGRAGRPQYDAIGEGIVIT-NHSELQYYLSLLNQQ-LPIESQFITKLPDSLNAEIVLGT 908
Query: 366 LCSSLEDVKTL---------IKHTLFYQLKSPE-DQQTFLETTLSEIV---ASLLASKGT 412
+ ++ E L +++ + Y + + E + TFLE +++ ASLL
Sbjct: 909 VKNAKEAANWLGYTYLYIRMLRNPVLYSISNQEKENDTFLEQRRMDLIHTAASLLDKDNL 968
Query: 413 MLTMNEAGHLSLTSIAKAAVQAGLSHDVC 441
+ ++G+ +T + + A SH C
Sbjct: 969 IKYDKKSGNFQITELGRIA-----SHYYC 992
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 66/124 (53%), Gaps = 8/124 (6%)
Query: 232 TNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS 291
+ L+E +L+G+AY H L+ E R+IE+ Y A +QI+ + ++ N A VI+ D+
Sbjct: 1607 STLKETLLHGIAYVHEGLSDTELRIIEQLYDACYIQIVVISRKMSWNFNFGAHLVIVMDT 1666
Query: 292 --YVGRDFISLNM----YKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPI 345
Y GR+ ++ QMVG+A R + +G +++C+T + F P P+
Sbjct: 1667 QYYDGRNHTYVDYPVTEVLQMVGKANRPMIDNAGVCVIMCQTSKK--EFYKKFLYEPLPV 1724
Query: 346 SSHM 349
SH+
Sbjct: 1725 ESHL 1728
>gi|448423498|ref|ZP_21582027.1| DEAD/DEAH box helicase [Halorubrum terrestre JCM 10247]
gi|445683335|gb|ELZ35734.1| DEAD/DEAH box helicase [Halorubrum terrestre JCM 10247]
Length = 666
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 101/387 (26%), Positives = 168/387 (43%), Gaps = 38/387 (9%)
Query: 28 GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE--NRIDEIGLIVIDEFHMLNEPQRGPI 85
G + T L + + T EK + S I+ + +DE+ +V+DE H+L +RGP
Sbjct: 97 GDFDATGEALAGNDVVVATSEK----VDSAIRNGASWVDELACVVVDEVHLLGAKRRGPT 152
Query: 86 LECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQ 145
LE ++ + +Q A+SAT+ N +A++ +++ RP + V V +V
Sbjct: 153 LEVTLATLRRRNPELQTVALSATVDNPDAIADWLDAELVESEWRPVELRTGVAVGGKV-- 210
Query: 146 SFDGKSLTEIYADNLDYSL---------------TGSGPDAV-------LHLVQGNLMVL 183
+FD + + D++ G D V L
Sbjct: 211 AFDDGTSLSVNVDSIADGADGEGDDGGDAGEVGDAGDANDPTEVTAALVADAVADGGQCL 270
Query: 184 IFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLST-NLEECILYGV 242
F S+ +LA RL D E ++ + DG L+ L +C+ GV
Sbjct: 271 AFVRSRREAVDLAERLADDGL--AAELGVEDAAAAAAEEATDVDGTLTGRQLADCLRAGV 328
Query: 243 AYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYV----GRDFI 298
A+HHA L +G R ++E A+ + IC T TLAAG+N+PA+RV++RD G +I
Sbjct: 329 AFHHAGLRSGHRGVVESAFRERDVACICATPTLAAGINVPARRVVVRDQRRYGEGGMSWI 388
Query: 299 SLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHM-DPPTLVDL 357
QM GRAGR GL GE++++ + PE + S + DP L
Sbjct: 389 PTLEVHQMCGRAGRPGLDPHGEAVLVADADTRDEVHERYVEGEPEAVESQLADPAALRTH 448
Query: 358 ILEVVAANLCSSLEDVKTLIKHTLFYQ 384
+L VA ++ ++ + + T + +
Sbjct: 449 VLAAVATGFAATETEILDVFEGTFYAR 475
>gi|440637194|gb|ELR07113.1| hypothetical protein GMDG_02382 [Geomyces destructans 20631-21]
Length = 1504
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 90/302 (29%), Positives = 150/302 (49%), Gaps = 24/302 (7%)
Query: 35 RQLNKKSIYICTIEKGSKLIGSLIQENRIDE-IGLIVIDEFHMLNEPQRGPILECVVSKV 93
R++ +I + T EK + ++ + + L +IDE H+L E RG LE VVS++
Sbjct: 360 RKVGSATIIVTTPEKWDSITRKWKDYIKLLQLVKLFLIDEVHILKE-NRGATLEAVVSRM 418
Query: 94 LYLKKSIQIFAMSATIGNINALSTFI---EGITYVENSRPTKHSEYVTVD-KRVFQSFDG 149
+ +++ A+SAT N + ++ ++ T++ R T E+ V ++ FD
Sbjct: 419 KSIGANVRFVALSATAPNSHDIAVWLGKDHTNTHLPAHRETFGEEFRPVKLQKHVHGFD- 477
Query: 150 KSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRLQFDRFPGTKE 209
S YA D L G P A++ +++FC ++ +C N A +L +
Sbjct: 478 -SNINDYA--FDSYLDGKLP-ALIAKYTHKKPIIVFCFTRKSCENTAAKL-------AEW 526
Query: 210 YKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQII 269
+ D S +L++ I GVAYHHA L G+R +IE++YL G +++I
Sbjct: 527 WASSRVVDRAWPAPTTRVPVSSKDLQDLIARGVAYHHAGLDPGDRIVIEKSYLNGQIRVI 586
Query: 270 CCTSTLAAGVNLPAQRVIIRDSYVGRDFISLNMYK-----QMVGRAGRTGLQESGESIML 324
CCTSTLA G+NLP V+++ + VG L Y QM+GRAGR +S +I++
Sbjct: 587 CCTSTLAVGINLPCHLVVLKGT-VGYQDGGLTEYPDLEVMQMLGRAGRPQFDDSAVAIIM 645
Query: 325 CK 326
+
Sbjct: 646 TR 647
>gi|169607078|ref|XP_001796959.1| hypothetical protein SNOG_06592 [Phaeosphaeria nodorum SN15]
gi|160707149|gb|EAT86423.2| hypothetical protein SNOG_06592 [Phaeosphaeria nodorum SN15]
Length = 1320
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 96/366 (26%), Positives = 176/366 (48%), Gaps = 40/366 (10%)
Query: 35 RQLNKKSIYICTIEKGSKLIGSLIQENRIDE-IGLIVIDEFHMLNEPQRGPILECVVSKV 93
R + +I I T EK + ++ I + +IDE H+L E RG +LE VVS++
Sbjct: 146 RNVQSANIIITTPEKWDSITRKWKDHEKLMRLIKVFLIDEVHILKE-GRGAVLETVVSRM 204
Query: 94 LYLKKSIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEY------VTVDKRVFQSF 147
+ ++ A+SAT+ N+ ++T++ G + E H ++ V + K V
Sbjct: 205 KSIGTDVRFVALSATVPNLGDVATWL-GKSSAEPHVQAPHEKFGEDFRPVKLRKHVCGYV 263
Query: 148 DGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLA---LRLQFDRF 204
S + LD L P+ + +G ++IFC+++ +C N A +R R
Sbjct: 264 SNISNDFGFEKILDAKL----PEVIAKYSEGK-PIMIFCTTRASCLNTAKLIVRWWMSRP 318
Query: 205 PGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAG 264
+++ K+ + ++ +L + + GVA+HHA L +R +E+ +L
Sbjct: 319 GNDRKWNPPSKQITL----------VNKDLRDTVASGVAFHHAGLDLDDRMQVEKGFLGH 368
Query: 265 TLQIICCTSTLAAGVNLPAQRVIIRDSYVGRD-----FISLNMYKQMVGRAGRTGLQESG 319
+ +ICCTSTLA GVNLP VII+++ D + L M QM+GRAGR ++
Sbjct: 369 EIGVICCTSTLAVGVNLPCHLVIIKNTVTYTDEGLQEYSDLEMM-QMLGRAGRPQFDDTA 427
Query: 320 ESIMLCKTMQDFLRFSSMMNAGPEPISS--HMDPPTLVDLILEVVAANLCSSLEDVKTLI 377
++++ ++++ R+ +M+ G E + S H++ L+D + + L+ + +
Sbjct: 428 VAVIMTRSVK-AQRYENMV-TGKELLESKLHLN---LIDHMNAEIGLGAIRDLDSARKWL 482
Query: 378 KHTLFY 383
K T Y
Sbjct: 483 KGTFLY 488
>gi|255082039|ref|XP_002508238.1| predicted protein [Micromonas sp. RCC299]
gi|226523514|gb|ACO69496.1| predicted protein [Micromonas sp. RCC299]
Length = 1901
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 168/653 (25%), Positives = 261/653 (39%), Gaps = 91/653 (13%)
Query: 28 GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILE 87
G Y P R L I +CT EK + + + ++ L+VIDE H+L RGPILE
Sbjct: 1072 GDYTPDIRALQGADIIVCTPEKWDGISRQWQARSYVTKVSLVVIDEIHLLGA-DRGPILE 1130
Query: 88 CVVSKVLYL----KKSIQIFAMSATIGNINALSTFIEGITYVE-------NSRPTKHSEY 136
+VS++ ++ ++ ++I +S + N N L+ ++ GI E N +P+
Sbjct: 1131 VIVSRMRFISTRTERPVRIVGLSTALANANDLADWL-GIEKQEGPKSGLFNFKPSVRP-- 1187
Query: 137 VTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPD-AVLHLVQGNLMVLIFCSSKIACSNL 195
V ++ + Q + GK Y + +T + P A + L+F SS+
Sbjct: 1188 VPLECHI-QGYPGK----FYCPRM---MTMNKPTYAAIRTHSPEKPALVFVSSRRQTRLT 1239
Query: 196 ALRL----QFDRFPGT-KEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLT 250
A+ L D P T E E + +K S L + +GV HHA L
Sbjct: 1240 AIDLIAYAAADERPDTFVHMDPYEMEMHLAKVK-------SPELRHTLQFGVGLHHAGLA 1292
Query: 251 AGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS--YVG--RDFISLNMYK-- 304
+R L EE +L +Q++ CTSTLA GVNLPA V+I+ + Y G R ++ +
Sbjct: 1293 PEDRALCEELFLKCKIQVLVCTSTLAWGVNLPAHLVVIKGTEFYDGKTRRYVDFPITDVL 1352
Query: 305 QMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAA 364
QM+GRAGR S ++++ + F P P+ S + EVVA
Sbjct: 1353 QMMGRAGRPQFDTSAVAVIMVHEPKK--AFYKKFLYEPFPVESSLADQLPDHFNAEVVAG 1410
Query: 365 NLCSSLEDV---------KTLIKHTLFYQLKSPEDQQTFLETTLSEIVASLLA--SKGTM 413
+ S + V + L+K+ +Y L+S E L LS +V + LA
Sbjct: 1411 TIRSKQDAVDYLTWTYFFRRLVKNPSYYDLESVE--HDALNAFLSRLVENALAQLEDAQC 1468
Query: 414 LTMNEAGHLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEYR 473
LT+ E L ++ + A L H + S L + SL L
Sbjct: 1469 LTIGEDDSLEPATMGRIASFYYLQHPSVALFASSLGPD-------TSLEQLL-------- 1513
Query: 474 IPSDGILLSRSKVYDRYTKFHPQTLRVAEALGVTENLVALNVTGKLKDEKKALLCRFFHA 533
GIL ++ YD H + AE E+ V +L D+ F A
Sbjct: 1514 ----GILCGVAE-YDELPVRHNEDKVNAELARQVEDAGGFKVDARLADDPHTKANLLFQA 1568
Query: 534 CILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELWCYKQL-LTD 592
L L ++ AK L+ + C E W L +
Sbjct: 1569 HFLRLQLPMSDYVTDAK----------GVLDQAVRILQAIIDVCAE--SGWLATCLHAMN 1616
Query: 593 LPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSL-ELIARADAKEMVAK 644
L Q +M R + M +PGV +A L +GY +L +L+ KE A+
Sbjct: 1617 LMQMVMQGRFITDPSCMSVPGVDEQKAASLSGSGYEALPQLVDACVNKEAAAR 1669
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 96/367 (26%), Positives = 168/367 (45%), Gaps = 42/367 (11%)
Query: 33 TKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSK 92
TK+++ + + + T EK + + + + L++IDE H+LN+ +RGP++E +V++
Sbjct: 220 TKKEMEETHMIVTTPEKWDVITRKGGEVSVASSLRLLIIDEVHLLND-ERGPVIETLVAR 278
Query: 93 ----VLYLKKSIQIFAMSATIGNINALSTFIEGIT------YVENSRPTKHSEYVTVDKR 142
V + I+I +SAT+ N ++ F+ G++ + ++ RP
Sbjct: 279 THRQVETTQSMIRIVGLSATLPNPADVAKFL-GVSDAGLFVFDQSFRPIP---------- 327
Query: 143 VFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRL--- 199
+ Q F G +TE A + D ++ ++F S+ A +L
Sbjct: 328 LTQMFVG--VTEGNAMKRQMLMAQIAYDKCTAALRSGKQAMVFVHSRKDTVKTAKQLGEI 385
Query: 200 -QFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIE 258
D+ G E E K+E + + L+E G H+A + +R L+E
Sbjct: 386 AANDQTQGGLELFAPENHPDFTTWKKEVERSRNNELKELFHRGFGCHNAGMLRSDRTLVE 445
Query: 259 EAYLAGTLQIICCTSTLAAGVNLPAQRVIIR-----DSYVG--RDFISLNMYKQMVGRAG 311
+ AG ++++CCT+TLA GVNLPA V+I+ D G RD L++ +Q+ GRAG
Sbjct: 446 RLFSAGVVKVLCCTATLAWGVNLPAHTVVIKGTTLYDPSKGGFRDLGVLDV-QQIFGRAG 504
Query: 312 RTGLQESGESIMLC--KTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAANLCSS 369
R G SGE +++ K + +L + PI S +L E+V +CS
Sbjct: 505 RPGFDTSGEGVIITEHKKLAHYLALLTHST----PIESQFISCLADNLNAELVLGTVCSV 560
Query: 370 LEDVKTL 376
E + L
Sbjct: 561 KEGAQWL 567
>gi|119194603|ref|XP_001247905.1| hypothetical protein CIMG_01676 [Coccidioides immitis RS]
Length = 1513
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 104/373 (27%), Positives = 162/373 (43%), Gaps = 60/373 (16%)
Query: 35 RQLNKKSIYICTIEKGSKLIGSLIQENRIDE-IGLIVIDEFHMLNEPQRGPILECVVSKV 93
R + SI I T EK + R+ + I L +IDE H+L E RG LE VVS++
Sbjct: 369 RNVQNASIIITTPEKWDSMTRKWKDHMRLMQLIKLFLIDEVHILKE-TRGATLEVVVSRM 427
Query: 94 LYLKKSIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSFDGKSLT 153
S++ A+SAT+ N ++T++ G P H + G+
Sbjct: 428 KSANSSVRFIALSATVPNSEDIATWL-GRDPTNQHLPAHHERF------------GEEFR 474
Query: 154 EIYADNLDYSLTGSGPDAVLHLVQGNLM------------VLIFCSSK---IACS-NLAL 197
+ Y +G D V V + + ++IFC ++ I+ S NLA
Sbjct: 475 PVKLQKFVYGYQSNGNDFVFEKVCDSKLPEVISKHSRRKPIMIFCCTRHSAISTSKNLAK 534
Query: 198 RLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLI 257
PG + N K ++ L GVA+HHA L +R +
Sbjct: 535 LWTATNAPG----------------RLWNSPKKPIIVQNQDLKGVAFHHAGLDTSDRHAV 578
Query: 258 EEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS-----YVGRDFISLNMYKQMVGRAGR 312
E AYL G + +ICCTSTLA G+NLP VII+++ + R++ L M QM+GRAGR
Sbjct: 579 EMAYLQGHISVICCTSTLAVGINLPCHLVIIKNTVSWQDHHRREYTDLEMM-QMLGRAGR 637
Query: 313 TGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISS--HMDPPTLVDLILEVVAANLCSSL 370
S +++L K ++ + + G EP+ S H + L+D + V + +
Sbjct: 638 PQFDNSATAVILTK--KERVDHYQKLVTGSEPLESCLHFN---LIDHLNAEVGLGTVTDI 692
Query: 371 EDVKTLIKHTLFY 383
E + T F+
Sbjct: 693 ESATMWLAGTFFF 705
>gi|46108656|ref|XP_381386.1| hypothetical protein FG01210.1 [Gibberella zeae PH-1]
Length = 2224
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 118/463 (25%), Positives = 218/463 (47%), Gaps = 52/463 (11%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V E+ +L K E + + E G + TK+Q+ + I + T EK +
Sbjct: 591 LVQEQVGNLGKRLEPYGIRVAELTGDRQL---TKQQITETQIIVTTPEKWDVITRKSNDL 647
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVL----YLKKSIQIFAMSATIGNINALS 116
+ + LI+IDE H+L++ RGP+LE +VS+ + + ++I +SAT+ N ++
Sbjct: 648 TYTNLVRLIIIDEIHLLHD-DRGPVLESIVSRTIRKTEQTGEPVRILGLSATLPNYKDVA 706
Query: 117 TFI-----EGITYVENS-RPTK-HSEYVTV-DKRVFQSFDGKSLTEIYADNLDYSLTGSG 168
+F+ +G+ + + S RP E+V V D++ + K++ ++ + +
Sbjct: 707 SFLRVDTKKGLFHFDGSYRPCPLRQEFVGVTDRKAIRQL--KTMNDVCYNKV-------- 756
Query: 169 PDAVLHLVQGNLMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDL--IEALKEEN 226
+ H+ +LIF S+ + A R D+ + + + D E L+E +
Sbjct: 757 ---IEHVGTNRNQMLIFVHSRKETAKTA-RYIRDKAVESDTIHQILRHDAGSREVLEEAS 812
Query: 227 DGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRV 286
+L++ + YG HHA ++ +R +E+ + G +Q++ CT+TLA GVNLPA V
Sbjct: 813 SQATDQDLKDILPYGFGIHHAGMSRADRTDVEDLFARGAIQVLVCTATLAWGVNLPAHTV 872
Query: 287 IIRDSYV----GRDFISLNMYK--QMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNA 340
II+ + V ++ L+ QM+GRAGR GE I++ T + + S++N
Sbjct: 873 IIKGTQVYSPEKGSWVELSPQDVLQMLGRAGRPQYDTYGEGIIIT-TQSEMQYYLSLLNQ 931
Query: 341 GPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLF---------YQLKSPEDQ 391
PI S + +L EVV N+ + E V+ L LF YQ+ + +
Sbjct: 932 Q-LPIESQFVSKLVDNLNAEVVLGNVRTRDEGVEWLGYTYLFVRMLRSPGLYQVGAEYED 990
Query: 392 QTFLETTLSEIV--ASLLASKGTMLTMNE-AGHLSLTSIAKAA 431
LE +++ A+++ K ++ +E G L T + + A
Sbjct: 991 DDALEQKRVDLIHSAAMVLRKSNLIKYDEKTGKLQSTELGRIA 1033
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 71/360 (19%), Positives = 147/360 (40%), Gaps = 28/360 (7%)
Query: 37 LNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYL 96
L K + + T + L + + + L + DE H+L + Q G + E +VS++ Y+
Sbjct: 1467 LEKGDLILATPTQWDVLSRQWKRRKNVQTVELFIADELHLLGDAQ-GYVYETIVSRMHYI 1525
Query: 97 KKS----IQIFAMSATIGNINALSTFIEGITY-VENSRPTKHSEYVTVDKRVFQSFDGKS 151
+ ++I A+S ++ N + +I+ + + N P + + + F + S
Sbjct: 1526 RTQTELPLRIIALSVSLANARDIGEWIDAKKHDIYNFSPHVRPVPLELHLQSFTNTHFPS 1585
Query: 152 LTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRLQFDRFPGTKEYK 211
L A ++T PD MV + + + + +
Sbjct: 1586 LMLAMAKPTYLAVTQMSPDK-------PAMVFVPSRKQTRATARDILAAAFADDDEDRFL 1638
Query: 212 KQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICC 271
E E + L N+ L+ E + +GV Y+H L+ ++R+++ Y G +Q++
Sbjct: 1639 HAEVEQMQPLLDRINEEALA----EALSHGVGYYHEALSQSDKRIVKHLYDNGAIQVLVA 1694
Query: 272 TSTLAAGVNLPAQRVIIRDS--YVGRDF----ISLNMYKQMVGRAGRTGLQESGESI-ML 324
+ + +N A VI+ + + GR+ L+ M G+A R G + ML
Sbjct: 1695 SRDVCWELNSTAHLVIVMGTQYFDGREHRYVDYPLSEVLHMFGKALRPSKDGRGRGVLML 1754
Query: 325 CKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQ 384
+ +++ + +N P+ SH+ L D+ + ++ + S +D T FY+
Sbjct: 1755 PQVKREY--YKKFLNEA-LPVESHLH-NYLHDVFVTEISTKMIESGDDAINWTTFTYFYR 1810
>gi|388851860|emb|CCF54454.1| related to HFM1-DNA/RNA helicase [Ustilago hordei]
Length = 1273
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 105/396 (26%), Positives = 176/396 (44%), Gaps = 92/396 (23%)
Query: 39 KKSIYICTIEKGSKLIGSLIQENRI-DEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLK 97
K + + T EK L +++ I I L++IDE H+LNE QRG LE VV+++
Sbjct: 245 KSRLIVTTPEKWDSLTRKWDEQSGILSTIRLVLIDEVHILNEAQRGARLEVVVTRIKNRG 304
Query: 98 KSIQIFAMSATIGNINALSTFI---------------------EGITYVENSRPTKHSEY 136
++ A+SAT+ N+ ++ +I E + E RP + ++
Sbjct: 305 HHVRFVAVSATVPNLADVAAWIGSNKHMRPAAAAVPLKDSPPAEMFQFGEAYRPCQLEKH 364
Query: 137 V-----TVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIA 191
V D+ FQ++ L E+ + LIFC+
Sbjct: 365 VYSYPKAKDEFAFQAYLNHKLLEL-----------------IETHAAGRPCLIFCA---- 403
Query: 192 CSNLALRLQFDRFPGTKEYKKQEKEDLIEALKE--ENDGKLST----------------- 232
T+ Q ++EA K+ EN G+ +
Sbjct: 404 ---------------TRRSTVQAANTIVEACKKARENGGRAPSLAGGGHRSLEATTFDDE 448
Query: 233 NLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS- 291
+L++ GVA+HHA L+AG+RR +E A+L+ + ++CCT+TLA G+NLPA VIIR +
Sbjct: 449 DLQKLASSGVAFHHAGLSAGDRRTVERAFLSDKIAVLCCTTTLATGINLPAYCVIIRGTK 508
Query: 292 -YVGR--DFISLNMYKQMVGRAGRTGLQESGESIMLCK-TMQDFLRFSSMMNAGPEPISS 347
Y G + L++ QM+GRAGR SG ++++C+ T+Q R + +G I S
Sbjct: 509 QYDGHWCEMSELDLI-QMMGRAGRPQFDRSGVAVIMCEDTVQAHYR---ELVSGSRDIES 564
Query: 348 HMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFY 383
+ P LV+ + V ++ +K I+ + +
Sbjct: 565 SL-APDLVEHVNAEVGLRGRTTEAQIKDWIRQSFMW 599
>gi|290998063|ref|XP_002681600.1| predicted protein [Naegleria gruberi]
gi|284095225|gb|EFC48856.1| predicted protein [Naegleria gruberi]
Length = 666
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 105/342 (30%), Positives = 180/342 (52%), Gaps = 54/342 (15%)
Query: 68 LIVIDEFHMLNEPQRGPILECVVSKVLYLKK----SIQIFAMSATIGNINALSTFIEG-- 121
LI+IDE H+LNE +RG +LE +VS++ + S +I A+SATI NI ++T+++
Sbjct: 160 LILIDEVHLLNE-ERGAVLEAIVSRIKSISSIQNHSSRIIALSATIPNIEDVATWLDVSQ 218
Query: 122 ---ITYVENSRPTK---HSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHL 175
+ + + RP+K S T DK+ + +F+ K L + D + S + P
Sbjct: 219 SNVLVFGDEYRPSKLELRSIGFTNDKKNYFAFE-KMLDKKLFDIIK-SESHEKP------ 270
Query: 176 VQGNLMVLIFCSSKIACSNLALRLQFDRFPGTKEY---KKQEKEDLIEALKEENDGKLST 232
L+FCSS+ + A ++ D Y ++KE L K D +L
Sbjct: 271 ------TLVFCSSRNSTMKSAQQIVNDSNSCKTNYFITSNEQKERLTAKSKNVEDQQL-- 322
Query: 233 NLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSY 292
E I++GVA+H A L++ +R ++E + L +IC TSTL+ G+N PA VII+ +
Sbjct: 323 --REMIVFGVAFHSAQLSSNDRNIVESLFSNRELSVICTTSTLSQGLNTPAYLVIIKGTK 380
Query: 293 V------GRDFISLNMYKQMVGRAGRTGLQESGESIMLCKT-MQDFLRFSSMMNAGPEPI 345
+ +++ S+N+ QM+GRAGR G +E+G +++L ++ M + + ++ N
Sbjct: 381 IYQSGTGYKEYPSMNVL-QMIGRAGRAGFEEAGLALILTESNMAE--TYQNLAN------ 431
Query: 346 SSHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQLKS 387
++++ TL I E + A +C L+ V+ L + T Y LKS
Sbjct: 432 NNYVIESTLHKYIFEHLNAEIC--LQSVRDLTEST--YWLKS 469
>gi|146080734|ref|XP_001464070.1| putative RNA helicase [Leishmania infantum JPCM5]
gi|134068160|emb|CAM66445.1| putative RNA helicase [Leishmania infantum JPCM5]
Length = 2167
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 103/372 (27%), Positives = 175/372 (47%), Gaps = 36/372 (9%)
Query: 33 TKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSK 92
TKR+L + + + T EK + E + ++ LI++DE H+LNE +RGP+LE +V++
Sbjct: 543 TKRELAETQVIVTTPEKWDVITRKQSNEELVSQVRLIIMDEIHLLNE-ERGPVLEALVAR 601
Query: 93 VLY-----LKKSIQIFAMSATIGNINALSTFI-----EGI-TYVENSRPTKHSEYVTVDK 141
L ++ +++ +SAT+ N ++ F+ EG+ + RP
Sbjct: 602 TLRHGELNPEQRVRLVGLSATLPNYKDVANFLQADLREGLKVFGPEYRPVP--------- 652
Query: 142 RVFQSFDG-KSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRLQ 200
+ Q+F G ++ + N ++ L + V+ V+ V++F S+ LA
Sbjct: 653 -LEQTFIGLQNTSGAQKRNKEFELDRLAYEEVVKNVREGHQVMVFVHSRKQTVGLAKYFI 711
Query: 201 FDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEA 260
+ +E+ Q K + A++++ +L G HHA L +R E
Sbjct: 712 EESTRRGEEHLFQYKGVMPSAIEKKGRTLQGRDLTSLFAAGFGAHHAGLVRYDRTTTEGF 771
Query: 261 YLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYV------GRDFISLNMYKQMVGRAGRTG 314
+ G L+++CCTSTLA GVNLPA V+IR + + G IS+ Q+ GRAGR
Sbjct: 772 FRDGYLRVLCCTSTLAWGVNLPAHTVVIRGTQMYDPKRGGLVSISVLDVMQIFGRAGRPQ 831
Query: 315 LQESGESIMLC--KTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAANLCSSLED 372
SG I++ K + FLR + A PI S M L D + V A SS+ +
Sbjct: 832 FDTSGHGIIISDDKEVSHFLR----LIAHALPIESQMQ-GKLCDHLNAEVNAGTISSVME 886
Query: 373 VKTLIKHTLFYQ 384
+ +++T +Q
Sbjct: 887 ASSWLEYTYMWQ 898
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 108/408 (26%), Positives = 177/408 (43%), Gaps = 45/408 (11%)
Query: 26 VKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPI 85
+ G P L K I T EK + + + + + L+V DE HML RGPI
Sbjct: 1398 LSGDATPDISALAKADILCTTPEKWDGISRNWQVRSYVTAVKLVVFDEVHMLGT-DRGPI 1456
Query: 86 LECVVSKVLYL----KKSIQIFAMSATIGNINALSTF--IEGITYVENSRPTKHSEYVTV 139
LE +VS++ Y+ K I++ +S + N LS++ +E V N P+ +TV
Sbjct: 1457 LEVIVSRMRYIGWNRKAPIRLVGLSTAVSNPGDLSSWLGVEKKWAVFNFDPSVRPVPMTV 1516
Query: 140 DKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRL 199
+ GK+ A ++ +A+ V++F SS+ A+ L
Sbjct: 1517 H---IAGYHGKNYCPRMA-----TMNKPTYNAICEK-SPTQPVIVFVSSRRQTRLTAMAL 1567
Query: 200 -QFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIE 258
F G D ++ + D ++ C+ +GV HHA L G+R ++E
Sbjct: 1568 IGFLLMEGNTAKWVHMNVDQVQEYTSKLDDPY---VKHCLQFGVGIHHAGLLEGDRTIVE 1624
Query: 259 EAYLAGTLQIICCTSTLAAGVNLPAQRVIIR---------DSYVGRDFISLNMYKQMVGR 309
EA+L+ +Q++ TSTLA GVN PA V+++ +SYV DF ++ QM+GR
Sbjct: 1625 EAFLSNRIQVLVATSTLAWGVNFPAHMVVVKGTEYYDAKTNSYV--DFPITDVL-QMIGR 1681
Query: 310 AGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAANLCSS 369
AGR G + +LC + F P P+ S + V + E+V+ + +
Sbjct: 1682 AGRPQFDTEGVAQVLCHEPKK--GFYRKFLYDPFPVESALHKQLHVHINAEIVSGTINTR 1739
Query: 370 LEDVKTLIKHTLFYQLK-----------SPEDQQTFLETTLSEIVASL 406
+ V L LF ++ SP+ FL T + ++A L
Sbjct: 1740 QDAVNYLTWTYLFRRIARNPSYYGLEDGSPKAVTIFLSTLVKGVLADL 1787
>gi|156837102|ref|XP_001642585.1| hypothetical protein Kpol_1075p5 [Vanderwaltozyma polyspora DSM
70294]
gi|156113132|gb|EDO14727.1| hypothetical protein Kpol_1075p5 [Vanderwaltozyma polyspora DSM
70294]
Length = 2175
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 119/419 (28%), Positives = 196/419 (46%), Gaps = 50/419 (11%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V E+ + + F + E G T +Q+++ I + T EK + +
Sbjct: 570 LVQEQVREFQRRLSPFGIKVSELTGDSNL---TSQQISETHILVSTPEKWDIITRKSNEL 626
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKV---LYLKKSIQIFAMSATIGNINALST 117
+ + L++IDE H+LN+ RGP+LE +V++ + +I A+SAT+ N ++
Sbjct: 627 TFVKTVDLVIIDEVHLLND-TRGPVLESIVARAHLSTNPSERPRIVALSATLPNYKDVAR 685
Query: 118 FI----EGITYVENS-RPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAV 172
F+ +G+ Y ++S RP S Q F G +TE A ++ + D V
Sbjct: 686 FLRVPDDGLFYFDSSYRPCPLS----------QQFCG--ITERNALKKLNAINEACYDKV 733
Query: 173 LHLVQGNLMVLIFCSSKIACSNLALRLQFDRFP-------------GTKEYKKQEKEDLI 219
L V V+IF S+ A L+ RF G KE K+E E+ I
Sbjct: 734 LESVSEGHQVIIFVHSRKDTIRTAQYLK-TRFSNENNLSKIIKSENGIKEILKRESENGI 792
Query: 220 -EALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAG 278
E LK E++ +++L+ I +G+ HHA L +R L E+ + G LQ++ T+TLA G
Sbjct: 793 KEILKRESENVNNSSLQTLISHGIGIHHAGLNRNDRSLSEDLFADGLLQVLVSTATLAWG 852
Query: 279 VNLPAQRVIIRDSYV----GRDFISLNMYK--QMVGRAGRTGLQESGESIMLCKTMQDFL 332
VNLPA VII+ + V ++ L+ QM+GRAGR GE +++ D
Sbjct: 853 VNLPAHTVIIKGTDVYSPEKGSWVQLSSQDILQMLGRAGRPRYDTHGEGVIIT-AQSDVQ 911
Query: 333 RFSSMMNAGPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFY--QLKSPE 389
+ +++N PI S + L E+V+ N+ + +D + + T Y L SPE
Sbjct: 912 YYLAILNQQL-PIESQFISSLIDSLNAEIVSGNV-KNRDDARKWLSLTYLYVRMLVSPE 968
>gi|326674580|ref|XP_002664072.2| PREDICTED: activating signal cointegrator 1 complex subunit 3-like,
partial [Danio rerio]
gi|385178703|sp|E7F8F4.2|ASCC3_DANRE RecName: Full=Activating signal cointegrator 1 complex subunit 3
Length = 1534
Score = 116 bits (290), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 109/398 (27%), Positives = 187/398 (46%), Gaps = 53/398 (13%)
Query: 14 EEFKFYLEEYAGVK-----GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGL 68
E++K +EE G K G P R + + + + T EK + S + + ++ +
Sbjct: 952 EDWKIRIEEKLGRKVVELTGDNTPDMRAIAQADLIVTTPEKWDGVSRSWQNRSYVQKVAI 1011
Query: 69 IVIDEFHMLNEPQRGPILECVVSKVLYLK----KSIQIFAMSATIGNINALSTFIEGITY 124
++IDE H+L E RGP+LE +VS+ ++ K++++ +S + N L+ ++ GI
Sbjct: 1012 LIIDEIHLLGE-DRGPVLEVIVSRTNFISSHTSKTVRVVGLSTALANARDLADWL-GIGQ 1069
Query: 125 VE--NSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLM- 181
V N RP+ + V Q F G+ A T + P V ++ +
Sbjct: 1070 VGLFNFRPSVRPVPLEVH---IQGFPGQHYCPRMA-------TMNKP--VFQAIRTHSPA 1117
Query: 182 --VLIFCSSKIACSNLALRLQFDRFPGTKEYKKQ-------EKEDLIEALKEENDGKLST 232
VLIF SS+ AL L F T++ KQ E D+I ++E +
Sbjct: 1118 KPVLIFVSSRRQTRLTALDLI--AFLATEDDPKQWLHQDEREMTDIIATIRE-------S 1168
Query: 233 NLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS- 291
NL+ + +G+ HHA L +R+ +EE ++ +Q++ TSTLA GVN PA VI++ +
Sbjct: 1169 NLKLTLAFGIGMHHAGLHERDRKTVEELFVNCKIQVLIATSTLAWGVNFPAHLVIVKGTE 1228
Query: 292 -YVG--RDFISLNMYK--QMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPIS 346
Y G R ++ + QM+GRAGR + G++++L ++ F P P+
Sbjct: 1229 YYDGKTRRYVDYPITDVLQMMGRAGRPQFDDQGKAVILVHDIKK--DFYKKFLYEPFPVE 1286
Query: 347 SHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQ 384
S + L D + +AA +S +D I T F++
Sbjct: 1287 SSL-LSVLSDHLNAEIAAGTVTSKQDAMDYITWTYFFR 1323
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 91/374 (24%), Positives = 169/374 (45%), Gaps = 35/374 (9%)
Query: 33 TKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEI-GLIVIDEFHMLNEPQRGPILECVVS 91
TK ++ + + + T EK + + + + ++ L+++DE H+L+E RGP+LE +V+
Sbjct: 169 TKGEILRTQMLVTTPEKWDVVTRKSVGDVALSQVVRLLILDEVHLLHE-DRGPVLESLVA 227
Query: 92 KVLYLKKS----IQIFAMSATIGNINALSTFIE-----GITYVENS-RPTKHSEYVTVDK 141
+ L +S I+I +SAT+ N ++TF+ G+ Y ++ RP
Sbjct: 228 RTLRQVESTQSMIRILGLSATLPNYLDVATFLHVNPFIGLFYFDSRFRPVP--------- 278
Query: 142 RVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRL-Q 200
+ QSF G T D + VL ++ V++F ++ + A+ L +
Sbjct: 279 -LGQSFVGIKTTNKVQQLHDMEEVCY--EKVLKQIKAGHQVMVFVHARNSTVRTAMSLIE 335
Query: 201 FDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEA 260
+ G + + ++ +++ + + E G HHA + +R L+E
Sbjct: 336 MAKNRGELSFFQVDQGADYGQCEKQIQRSRNKQMREMFPDGFGIHHAGMLRQDRSLMESM 395
Query: 261 YLAGTLQIICCTSTLAAGVNLPAQRVIIR-----DSYVGRDFISLNMYK--QMVGRAGRT 313
+ G L+++ CT+TLA GVNLPA VII+ D+ G + L + Q+ GRAGR
Sbjct: 396 FSRGYLKVLVCTATLAWGVNLPAHAVIIKGTNIYDAKRG-TLVDLGILDVMQIFGRAGRP 454
Query: 314 GLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAANLCSSLEDV 373
+ GE ++ T D L + PI S +L E+ + + E V
Sbjct: 455 QFDKYGEGTII--TTHDKLSHYLTLLTQQNPIESQFQQSLADNLNAEIALGTVTNVDEAV 512
Query: 374 KTLIKHTLFYQLKS 387
+ L L+ ++++
Sbjct: 513 RWLSYTYLYVRMRA 526
>gi|429856207|gb|ELA31131.1| pre-mRNA splicing helicase [Colletotrichum gloeosporioides Nara gc5]
Length = 2201
Score = 116 bits (290), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 126/508 (24%), Positives = 234/508 (46%), Gaps = 62/508 (12%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V E+ + K E + + E G + TK+Q+ + I + T EK +
Sbjct: 591 LVQEQVGNFGKRLEPYGVKVSELTGDRQL---TKQQIAETQIIVTTPEKWDVITRKATDI 647
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVL----YLKKSIQIFAMSATIGNINALS 116
+ + L++IDE H+L++ RGP+LE +VS+ + + +++ +SAT+ N ++
Sbjct: 648 TYTNLVRLVIIDEIHLLHD-DRGPVLESIVSRTIRKTEQTGEPVRLVGLSATLPNYKDVA 706
Query: 117 TFIE-----GITYVENS-RPTK-HSEYVTV-DKRVFQSFDGKSLTEIYADNLDYSLTGSG 168
+F+ G+ + + S RP E++ V D++ + K++ ++ + +
Sbjct: 707 SFLRVDINSGLFHFDGSFRPCPLRQEFIGVTDRKAIKQL--KTMNDVTYNKV-------- 756
Query: 169 PDAVLHLVQGNLMVLIFCSSKIACSNLA--LR---LQFDRFPGTKEYKKQEKEDLIEALK 223
+ H+ +LIF S+ + A +R L+ D + +E L EA
Sbjct: 757 ---IEHVGANRNQMLIFVHSRKETAKTARYIRDKALEMDTINQILRHDAGSREVLNEAAS 813
Query: 224 EENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPA 283
+ D +L++ + YG HHA + +R +E+ + G +Q++ CT+TLA GVNLPA
Sbjct: 814 QATD----KDLKDILPYGFGIHHAGMNRIDRTDVEDLFARGAIQVLVCTATLAWGVNLPA 869
Query: 284 QRVIIRDSYV----GRDFISLNMYK--QMVGRAGRTGLQESGESIMLCKTMQDFLRFSSM 337
VII+ + V ++ L+ QM+GRAGR GE I++ T + + S+
Sbjct: 870 HTVIIKGTSVYSPEKGSWVELSPQDVLQMLGRAGRPQFDTYGEGIIIT-TQNEIQYYLSL 928
Query: 338 MNAGPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQ-LKSP-------- 388
+N PI S + +L E+V N+ S E V+ L LF + L+SP
Sbjct: 929 LNQQ-LPIESQFVSRLVDNLNAEIVLGNVRSRDEGVEWLGYTYLFVRMLRSPGLYQVGAE 987
Query: 389 -EDQQTFLETTLSEI-VASLLASKGTMLTMNE-AGHLSLTSIAKAAVQAGLSHDVCLIIY 445
ED + + + I A+ + K ++ +E +G L T + + A ++H + Y
Sbjct: 988 YEDDEALEQKRVDLIHSAATVLRKSNLVKYDEKSGRLQSTELGRIASHYYITHG-SMDTY 1046
Query: 446 SDLLH---NKLNFCLLNSLHMLFLVIPL 470
++L+ + + SL F IP+
Sbjct: 1047 NNLIQPSITTIELFRVFSLSAEFKYIPI 1074
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 77/367 (20%), Positives = 152/367 (41%), Gaps = 42/367 (11%)
Query: 37 LNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYL 96
L + + + T + L + + + L + DE H+L G + E ++S++ Y+
Sbjct: 1467 LERSDLVLATPVQWDVLSRQWKRRKNVSTVELFIADEAHLLGN-NMGYVYEIIISRMHYI 1525
Query: 97 KKS----IQIFAMSATIGNINALSTFIEGITY-VENSRPTKHSEYVTVDKRVFQSFDGKS 151
+ ++I A+ ++ N L +I+ + + N P H V ++ + +S
Sbjct: 1526 RTQTELPMRIIALGVSLANARDLGEWIDAKKHDIYNFSP--HVRPVPLELHI------QS 1577
Query: 152 LTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKI--ACSNLALRLQF-----DRF 204
T + +L S+ A+ + ++ S K A + L F DRF
Sbjct: 1578 YTNPHFPSLMLSMAKPTYLAITQMSADKPAIVFVPSRKQTRATTRDLLTAAFMDDDEDRF 1637
Query: 205 PGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAG 264
+ ++ L+E + EE L E + +GV Y+H L+ ++R+++ Y G
Sbjct: 1638 ---LHAEPEQLRPLLERINEEA-------LAEALSHGVGYYHEALSQSDKRIVKHLYEHG 1687
Query: 265 TLQIICCTSTLAAGVNLPAQRVIIRDS--YVGRDF----ISLNMYKQMVGRAGRTGLQES 318
+Q++ + + +N A VI+ + + GR+ SL+ M G+A R
Sbjct: 1688 AIQVLVASRDVCWELNSTAHLVIVMGTQYFEGREHRYIDYSLSEVLHMFGKALRPSKDGR 1747
Query: 319 GESI-MLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKTLI 377
G + ML +DF + +N P+ SH+ L D + ++ + S +D
Sbjct: 1748 GRGVLMLPAAKRDF--YKKFLNEA-LPVESHLH-NYLHDAFVTEISTKMIESGDDAINWT 1803
Query: 378 KHTLFYQ 384
T FY+
Sbjct: 1804 TFTYFYR 1810
>gi|296814878|ref|XP_002847776.1| ATP-dependent DNA helicase MER3 [Arthroderma otae CBS 113480]
gi|238840801|gb|EEQ30463.1| ATP-dependent DNA helicase MER3 [Arthroderma otae CBS 113480]
Length = 1443
Score = 116 bits (290), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 96/372 (25%), Positives = 169/372 (45%), Gaps = 53/372 (14%)
Query: 35 RQLNKKSIYICTIEKGSKLIGSLIQENRIDE-IGLIVIDEFHMLNEPQRGPILECVVSKV 93
R + + SI I T EK + R+ + I L++IDE H+L E RG LE +VS++
Sbjct: 316 RNVQQASIIITTPEKWDSMTRKWKDHMRLMQLIKLVLIDEVHILKE-VRGATLEAIVSRM 374
Query: 94 LYLKKSIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSFDGKSLT 153
+ +++ A+SAT+ N +++++ PT ++++ + F G+
Sbjct: 375 KSVNSNVRFVALSATVPNSEDIASWL-------GKDPT--NQHLPAHRERF----GEEFR 421
Query: 154 EIYADNLDYSLTGSGPDAVLHLV------------QGNLMVLIFC---SSKIACSNLALR 198
+ Y +G D V +L+FC +S I S +
Sbjct: 422 PVRLQKFVYGYQSNGNDFAFDRVCEAKLPDILAKHSSKKPILVFCCTRNSAITTSKNLAK 481
Query: 199 LQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIE 258
L P + ++ K ++ + +L ++ GVA+HHA L +R IE
Sbjct: 482 LWSSANPPQRLWRSPTKPVQVQ----------NADLSGVVITGVAFHHAGLDTSDRHAIE 531
Query: 259 EAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVG-----RDFISLNMYKQMVGRAGRT 313
+L+G + +ICCTSTLA GVNLP V+I+++ R++ L M QM+GRAGR
Sbjct: 532 TGFLSGQINVICCTSTLAVGVNLPCHLVVIKNTVSWQDGGCREYADLEMM-QMLGRAGRP 590
Query: 314 GLQESGESIMLCKTMQDFLRFSSMMNAGPEPISS--HMDPPTLVDLILEVVAANLCSSLE 371
+S ++L T ++ + + AG EP+ S H++ L+D + + + +E
Sbjct: 591 QFDDSAVGVIL--TRKERVAHYEKLVAGSEPLESCLHLN---LIDHLNAEIGLGTVTDIE 645
Query: 372 DVKTLIKHTLFY 383
+ T F+
Sbjct: 646 SAIRWLLGTFFF 657
>gi|348560536|ref|XP_003466069.1| PREDICTED: LOW QUALITY PROTEIN: activating signal cointegrator 1
complex subunit 3-like [Cavia porcellus]
Length = 2203
Score = 116 bits (290), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 108/397 (27%), Positives = 184/397 (46%), Gaps = 51/397 (12%)
Query: 14 EEFKFYLEEYAGVK-----GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGL 68
+++K +EE G K G P + + K + + T EK + S N + ++ +
Sbjct: 1391 DDWKVRIEEKLGKKVIELTGDVTPDMKSIAKADLIVTTPEKWDGISRSWQNRNYVQQVTI 1450
Query: 69 IVIDEFHMLNEPQRGPILECVVSKVLYL----KKSIQIFAMSATIGNINALSTFIE---- 120
++IDE H+L E +RGP+LE +VS+ ++ +K ++I +S + N L+ ++
Sbjct: 1451 LIIDEIHLLGE-ERGPVLEVIVSRTNFISSHTEKPVRIVGLSTALANARDLADWLNIKQM 1509
Query: 121 GITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNL 180
G+ N RP+ + V Q F G+ A S+ A+
Sbjct: 1510 GLF---NFRPSVRPVPLEVH---IQGFPGQHYCPRMA-----SMNKPAFQAIRSHSPAK- 1557
Query: 181 MVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQ-------EKEDLIEALKEENDGKLSTN 233
VLIF SS+ AL L F T+E KQ E E++I +K+ +N
Sbjct: 1558 PVLIFVSSRRQTRLTALELI--AFLATEEDPKQWLNMDEREMENIIGTVKD-------SN 1608
Query: 234 LEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS-- 291
L+ + +G+ HHA L +R+ +EE ++ +Q++ TSTLA GVN PA VII+ +
Sbjct: 1609 LKLTLAFGIGMHHAGLHERDRKTVEELFVHCKVQVLIATSTLAWGVNFPAHLVIIKGTEY 1668
Query: 292 YVG--RDFISLNMYK--QMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISS 347
Y G R ++ + QM+GRAGR + G++++L ++ F P P+ S
Sbjct: 1669 YDGKTRRYVDFPITDVLQMMGRAGRPQFDDQGKAVILVHDIKK--DFYKKFLYEPFPVES 1726
Query: 348 HMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQ 384
+ L D + +A +S +D I T F++
Sbjct: 1727 SL-LGVLSDHLNAEIAGGTITSKQDAMDYITWTYFFR 1762
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 102/380 (26%), Positives = 177/380 (46%), Gaps = 56/380 (14%)
Query: 33 TKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEI-GLIVIDEFHMLNEPQRGPILECVVS 91
+K ++ + + + T EK + + + + +I L+++DE H+L+E RGP+LE +V+
Sbjct: 572 SKNEILRTQMLVTTPEKWDVVTRKSVGDVALSQIVKLLILDEVHLLHE-DRGPVLESIVA 630
Query: 92 KVLYLKKS----IQIFAMSATIGNINALSTFIE-----GITYVENS-RPTKHSEYVTVDK 141
+ L +S I+I +SAT+ N ++TF+ G+ Y + RP
Sbjct: 631 RTLRQVESTQSMIRILGLSATLPNYLDVATFLHVNPYIGLFYFDGRFRPVP--------- 681
Query: 142 RVFQSFDG-KSLTEIYA-DNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRL 199
+ Q+F G KS ++ +N+D ++VL V+ V++F ++ A A+ L
Sbjct: 682 -LGQTFLGIKSTNKMQQLNNMDEVCY----ESVLKQVKAGHQVMVFVHARNATVRTAMSL 736
Query: 200 --------QFDRFPGTK--EYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADL 249
Q F ++ EY EK+ K N + E G + HHA +
Sbjct: 737 IERAKNCGQISCFLPSQGPEYGHAEKQ----VQKSRN-----KQVRELFADGFSIHHAGM 787
Query: 250 TAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS--YVGR--DFISLNMYK- 304
+R L+E + G ++++ CT+TLA GVNLPA VII+ + Y + F+ L +
Sbjct: 788 LRQDRNLVENLFSNGHIKVLVCTATLAWGVNLPAHAVIIKGTQIYAAKRGSFVDLGILDV 847
Query: 305 -QMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVA 363
Q+ GRAGR + GE I++ T D L + PI S +L D + +A
Sbjct: 848 MQIFGRAGRPQFDKFGEGIII--TTHDKLSHYLTLLTQQNPIESQF-LESLADNLNAEIA 904
Query: 364 ANLCSSLEDVKTLIKHTLFY 383
+++E+ I +T Y
Sbjct: 905 LGTVTNVEEAVKWISYTYLY 924
>gi|398012114|ref|XP_003859251.1| RNA helicase, putative [Leishmania donovani]
gi|322497465|emb|CBZ32539.1| RNA helicase, putative [Leishmania donovani]
Length = 2167
Score = 116 bits (290), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 103/372 (27%), Positives = 175/372 (47%), Gaps = 36/372 (9%)
Query: 33 TKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSK 92
TKR+L + + + T EK + E + ++ LI++DE H+LNE +RGP+LE +V++
Sbjct: 543 TKRELAETQVIVTTPEKWDVITRKQSNEELVSQVRLIIMDEIHLLNE-ERGPVLEALVAR 601
Query: 93 VLY-----LKKSIQIFAMSATIGNINALSTFI-----EGI-TYVENSRPTKHSEYVTVDK 141
L ++ +++ +SAT+ N ++ F+ EG+ + RP
Sbjct: 602 TLRHGELNPEQRVRLVGLSATLPNYKDVANFLQADLREGLKVFGPEYRPVP--------- 652
Query: 142 RVFQSFDG-KSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRLQ 200
+ Q+F G ++ + N ++ L + V+ V+ V++F S+ LA
Sbjct: 653 -LEQTFIGLQNTSGPQKRNKEFELDRLAYEEVVKNVREGHQVMVFVHSRKQTVGLAKYFI 711
Query: 201 FDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEA 260
+ +E+ Q K + A++++ +L G HHA L +R E
Sbjct: 712 EESTRRGEEHLFQYKGVMPSAIEKKGRTLQGRDLTSLFAAGFGAHHAGLVRYDRTTTEGF 771
Query: 261 YLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYV------GRDFISLNMYKQMVGRAGRTG 314
+ G L+++CCTSTLA GVNLPA V+IR + + G IS+ Q+ GRAGR
Sbjct: 772 FRDGYLRVLCCTSTLAWGVNLPAHTVVIRGTQMYDPKRGGLVSISVLDVMQIFGRAGRPQ 831
Query: 315 LQESGESIMLC--KTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAANLCSSLED 372
SG I++ K + FLR + A PI S M L D + V A SS+ +
Sbjct: 832 FDTSGHGIIISDDKEVSHFLR----LIAHALPIESQMQ-GKLCDHLNAEVNAGTISSVME 886
Query: 373 VKTLIKHTLFYQ 384
+ +++T +Q
Sbjct: 887 ASSWLEYTYMWQ 898
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 108/408 (26%), Positives = 177/408 (43%), Gaps = 45/408 (11%)
Query: 26 VKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPI 85
+ G P L K I T EK + + + + + L+V DE HML RGPI
Sbjct: 1398 LSGDATPDISALAKADILCTTPEKWDGISRNWQVRSYVTAVKLVVFDEVHMLGT-DRGPI 1456
Query: 86 LECVVSKVLYL----KKSIQIFAMSATIGNINALSTF--IEGITYVENSRPTKHSEYVTV 139
LE +VS++ Y+ K I++ +S + N LS++ +E V N P+ +TV
Sbjct: 1457 LEVIVSRMRYIGWNRKAPIRLVGLSTAVSNPGDLSSWLGVEKKWAVFNFDPSVRPVPMTV 1516
Query: 140 DKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRL 199
+ GK+ A ++ +A+ V++F SS+ A+ L
Sbjct: 1517 H---IAGYHGKNYCPRMA-----TMNKPTYNAICEK-SPTQPVIVFVSSRRQTRLTAMAL 1567
Query: 200 -QFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIE 258
F G D ++ + D ++ C+ +GV HHA L G+R ++E
Sbjct: 1568 IGFLLMEGNTAKWVHMNVDQVQEYTSKLDDPY---VKHCLQFGVGIHHAGLLEGDRTIVE 1624
Query: 259 EAYLAGTLQIICCTSTLAAGVNLPAQRVIIR---------DSYVGRDFISLNMYKQMVGR 309
EA+L+ +Q++ TSTLA GVN PA V+++ +SYV DF ++ QM+GR
Sbjct: 1625 EAFLSNRIQVLVATSTLAWGVNFPAHMVVVKGTEYYDAKTNSYV--DFPITDVL-QMIGR 1681
Query: 310 AGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAANLCSS 369
AGR G + +LC + F P P+ S + V + E+V+ + +
Sbjct: 1682 AGRPQFDTEGVAQVLCHEPKK--GFYRKFLYDPFPVESALHKQLHVHINAEIVSGTINTR 1739
Query: 370 LEDVKTLIKHTLFYQLK-----------SPEDQQTFLETTLSEIVASL 406
+ V L LF ++ SP+ FL T + ++A L
Sbjct: 1740 QDAVNYLTWTYLFRRIARNPSYYGLEDGSPKAVTIFLSTLVKGVLADL 1787
>gi|157128662|ref|XP_001661489.1| U520 [Aedes aegypti]
gi|108872530|gb|EAT36755.1| AAEL011187-PA [Aedes aegypti]
Length = 2075
Score = 116 bits (290), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 112/463 (24%), Positives = 223/463 (48%), Gaps = 59/463 (12%)
Query: 28 GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILE 87
G + ++ Q+ + +CT EK + ++ + L++IDE H+L++ +RGP+LE
Sbjct: 503 GDHQLSREQIAATQVIVCTPEKWDIITRKGGEKTYTQLVRLVIIDEIHLLHD-ERGPVLE 561
Query: 88 CVVSKVLY----LKKSIQIFAMSATIGNINALSTFIE-----GITYVENS-RPTK-HSEY 136
+V++ + ++ +++ +SAT+ N + ++TF+ G+ Y +NS RP +Y
Sbjct: 562 SLVARTIRNIETTQEDVRLVGLSATLPNYHDVATFLRVRPETGLFYFDNSFRPVALEQQY 621
Query: 137 VTV-DKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNL 195
+ V +K+ + F + + +I + + + H + ++V + + +
Sbjct: 622 IGVTEKKALKRF--QVMNDIVYEKV-----------MEHAGKNQVLVFVHSRKETGKTAR 668
Query: 196 ALR---LQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAG 252
A+R L+ D +E +E L+ E + + L++ + YG A HHA +T
Sbjct: 669 AIRDMCLEKDTLGSFL----REGSASMEVLRSEAEQVKNAELKDLLPYGFAIHHAGMTRV 724
Query: 253 ERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYV-----GRDFISLNMYK--Q 305
+R L+E+ + +Q++ T+TLA GVNLPA VII+ + + GR ++ L+ Q
Sbjct: 725 DRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGR-WVELSALDVLQ 783
Query: 306 MVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAAN 365
M+GRAGR GE I++ + + S++N PI S + + D++ +
Sbjct: 784 MLGRAGRPQYDTKGEGILIT-NHSELQYYLSLLNQQL-PIESQL-VSKMPDMLNAEIVLG 840
Query: 366 LCSSLEDVKTLIKHTLFY--QLKSPE---------DQQTFLETTLSEIV--ASLLASKGT 412
+++D T + +T Y L+ P + LE +++V A+L K
Sbjct: 841 TIQNVKDAVTWLGYTYLYIRMLRQPTLYGVSYDAIKEDPLLEHFRADLVHTAALHLEKSG 900
Query: 413 MLTMN-EAGHLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLN 454
++ + ++GH +T I + A +HD ++ Y+ LL L+
Sbjct: 901 LIKYDRKSGHFQVTEIGRIASHYYCTHD-TMLTYNQLLKPTLS 942
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 150/334 (44%), Gaps = 47/334 (14%)
Query: 39 KKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYL-- 96
K I + T +K L Q + I L ++DE ++ + GP+LE V S++ Y+
Sbjct: 1353 KGQIIVTTADKWDILSRRWKQRKNVQNIQLFIVDELQLIG-GEEGPVLEVVCSRMRYISS 1411
Query: 97 --KKSIQIFAMSATIGNINALSTFI---EGITYVENSRPTKHSEYVTVDKRVFQSFDGKS 151
+K I+I A+SA++ + ++ ++ T+ N P+ + + + F S
Sbjct: 1412 QIEKQIRIIALSASLSDARDVAQWLGCNANATF--NFHPSVRPIPLELHVQGFNITHNAS 1469
Query: 152 LTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRL--------QFDR 203
+ + ++T P + V++F SS+ A+ + Q +R
Sbjct: 1470 RVAAMSKPVYNAITKFSP---------HKPVIVFVSSRKLARLTAIDILTYCAAEAQPNR 1520
Query: 204 FPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLA 263
F E++D+ L D L+E + GVAY H LT + R++E+ + +
Sbjct: 1521 F------FHAEEDDIKPFLDRMTD----KTLKETLSQGVAYIHEGLTPSDHRIVEQLFDS 1570
Query: 264 GTLQIICCTSTLAAGVNLPAQRVIIRDS--YVGR----DFISLNMYKQMVGRAGRTGLQE 317
G +QI T L G+N+ A V+I D+ Y G+ D + QMVGRA R +
Sbjct: 1571 GAVQIAVVTRDLCWGLNISAYLVVIMDTQFYNGKSHSYDDYPVTDVMQMVGRANRPLEDD 1630
Query: 318 SGESIMLCK-TMQDFLRFSSMMNAGPEPISSHMD 350
+ +++C+ + +DF F +N P+ SH+D
Sbjct: 1631 DAKCVLMCQSSKKDF--FKKFLNESL-PVESHLD 1661
>gi|408398887|gb|EKJ78013.1| hypothetical protein FPSE_01801 [Fusarium pseudograminearum CS3096]
Length = 2206
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 118/463 (25%), Positives = 218/463 (47%), Gaps = 52/463 (11%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V E+ +L K E + + E G + TK+Q+ + I + T EK +
Sbjct: 591 LVQEQVGNLGKRLEPYGIRVAELTGDRQL---TKQQIAETQIIVTTPEKWDVITRKSNDL 647
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVL----YLKKSIQIFAMSATIGNINALS 116
+ + LI+IDE H+L++ RGP+LE +VS+ + + ++I +SAT+ N ++
Sbjct: 648 TYTNLVRLIIIDEIHLLHD-DRGPVLESIVSRTIRKTEQTGEPVRILGLSATLPNYKDVA 706
Query: 117 TFI-----EGITYVENS-RPTK-HSEYVTV-DKRVFQSFDGKSLTEIYADNLDYSLTGSG 168
+F+ +G+ + + S RP E+V V D++ + K++ ++ + +
Sbjct: 707 SFLRVDTKKGLFHFDGSYRPCPLRQEFVGVTDRKAIRQL--KTMNDVCYNKV-------- 756
Query: 169 PDAVLHLVQGNLMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDL--IEALKEEN 226
+ H+ +LIF S+ + A R D+ + + + D E L+E +
Sbjct: 757 ---IEHVGTNRNQMLIFVHSRKETAKTA-RYIRDKAVESDTIHQILRHDAGSREVLEEAS 812
Query: 227 DGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRV 286
+L++ + YG HHA ++ +R +E+ + G +Q++ CT+TLA GVNLPA V
Sbjct: 813 SQATDQDLKDILPYGFGIHHAGMSRADRTDVEDLFARGAIQVLVCTATLAWGVNLPAHTV 872
Query: 287 IIRDSYV----GRDFISLNMYK--QMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNA 340
II+ + V ++ L+ QM+GRAGR GE I++ T + + S++N
Sbjct: 873 IIKGTQVYSPEKGSWVELSPQDVLQMLGRAGRPQYDTYGEGIIIT-TQSEMQYYLSLLNQ 931
Query: 341 GPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLF---------YQLKSPEDQ 391
PI S + +L EVV N+ + E V+ L LF YQ+ + +
Sbjct: 932 Q-LPIESQFVSKLVDNLNAEVVLGNVRTRDEGVEWLGYTYLFVRMLRSPGLYQVGAEYED 990
Query: 392 QTFLETTLSEIV--ASLLASKGTMLTMNE-AGHLSLTSIAKAA 431
LE +++ A+++ K ++ +E G L T + + A
Sbjct: 991 DDALEQKRVDLIHSAAMVLRKSNLIKYDEKTGKLQSTELGRIA 1033
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 71/360 (19%), Positives = 147/360 (40%), Gaps = 28/360 (7%)
Query: 37 LNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYL 96
L K + + T + L + + + L + DE H+L + Q G + E +VS++ Y+
Sbjct: 1467 LEKGDLILATPTQWDVLSRQWKRRKNVQTVELFIADELHLLGDSQ-GYVYETIVSRMHYI 1525
Query: 97 KKS----IQIFAMSATIGNINALSTFIEGITY-VENSRPTKHSEYVTVDKRVFQSFDGKS 151
+ ++I A+S ++ N + +I+ + + N P + + + F + S
Sbjct: 1526 RTQTELPLRIIALSVSLANARDIGEWIDAKKHDIYNFSPHVRPVPLELHLQSFTNTHFPS 1585
Query: 152 LTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRLQFDRFPGTKEYK 211
L A ++T PD MV + + + + +
Sbjct: 1586 LMLAMAKPTYLAVTQMCPDK-------PAMVFVPSRKQTRATARDILAAAFADDDEDRFL 1638
Query: 212 KQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICC 271
E E + L N+ L+ E + +GV Y+H L+ ++R+++ Y G +Q++
Sbjct: 1639 HAEVEQMQPLLDRINEEALA----EALSHGVGYYHEALSQSDKRIVKHLYDNGAIQVLVA 1694
Query: 272 TSTLAAGVNLPAQRVIIRDS--YVGRDF----ISLNMYKQMVGRAGRTGLQESGESI-ML 324
+ + +N A VI+ + + GR+ L+ M G+A R G + ML
Sbjct: 1695 SRDVCWELNSTAHLVIVMGTQYFDGREHRYVDYPLSEVLHMFGKALRPSKDGRGRGVLML 1754
Query: 325 CKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQ 384
+ +++ + +N P+ SH+ L D+ + ++ + S +D T FY+
Sbjct: 1755 PQVKREY--YKKFLNEA-LPVESHLH-NYLHDVFVTEISTKMIESGDDAINWTTFTYFYR 1810
>gi|312383231|gb|EFR28397.1| hypothetical protein AND_03789 [Anopheles darlingi]
Length = 2300
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 114/463 (24%), Positives = 222/463 (47%), Gaps = 59/463 (12%)
Query: 28 GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILE 87
G + ++ Q+ + +CT EK + ++ + L++IDE H+L++ +RGP+LE
Sbjct: 604 GDHQLSREQIAATQVIVCTPEKWDIITRKGGEKTYTQYVRLVIIDEIHLLHD-ERGPVLE 662
Query: 88 CVVSKVLY----LKKSIQIFAMSATIGNINALSTFIE-----GITYVENS-RPTK-HSEY 136
+V++ + ++ +++ +SAT+ N ++TF+ G+ Y +NS RP +Y
Sbjct: 663 ALVARTIRNIETTQEDVRLVGLSATLPNYQDVATFLRVRPDTGLFYFDNSYRPVALEQQY 722
Query: 137 VTV-DKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNL 195
+ V +K+ + F + + +I + + + H + ++V + + +
Sbjct: 723 IGVTEKKALKRF--QVMNDIVYEKV-----------MEHAGRNQVLVFVHSRKETGKTAR 769
Query: 196 ALR---LQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAG 252
A+R L+ D +E +E L+ E + + L++ + YG A HHA +T
Sbjct: 770 AIRDMCLEKDTLGSFL----REGSASMEVLRSEAEQVKNQELKDLLPYGFAIHHAGMTRV 825
Query: 253 ERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYV-----GRDFISLNMYK--Q 305
+R L+E+ + +Q++ T+TLA GVNLPA VII+ + V GR ++ L Q
Sbjct: 826 DRTLVEDLFADRHIQVLISTATLAWGVNLPAHTVIIKGTQVYNPEKGR-WVELGALDVLQ 884
Query: 306 MVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAAN 365
M+GRAGR GE I++ + + S++N PI S + L D++ +
Sbjct: 885 MLGRAGRPQYDTKGEGILIT-NHSELQYYLSLLNQQL-PIESQL-ISKLPDMLNAEIVLG 941
Query: 366 LCSSLEDVKTLIKHTLFY--QLKSPE---------DQQTFLETTLSEIV--ASL-LASKG 411
+++D T + +T Y L+ P + + LE +++V A+L L G
Sbjct: 942 TIQNVKDAVTWLGYTYLYIRMLRQPTLYGVSVDAVQEDSLLEHFRADLVHTAALHLERSG 1001
Query: 412 TMLTMNEAGHLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLN 454
+ ++GHL +T + + A +H+ ++ Y+ LL L+
Sbjct: 1002 LIKYDRKSGHLQVTEVGRIASHYYCTHET-MLTYNQLLKPTLS 1043
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 90/375 (24%), Positives = 166/375 (44%), Gaps = 58/375 (15%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+ HE +Q ++A K + G+ + + K I + T +K L Q
Sbjct: 1422 IFHEWHQRFGQSALGCKV-----VKLTGETGTDLKLIAKGQIIVTTADKWDVLSRRWKQR 1476
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYL----KKSIQIFAMSATIGNINALS 116
+ + L ++DE ++ + GP+LE V S++ Y+ ++ I+I A+SA++ + ++
Sbjct: 1477 KNVQNVQLFIVDELQLIG-GEDGPVLEVVCSRMRYISSQIEQPIRIVALSASLADARDIA 1535
Query: 117 TFIEGIT-----YVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGP-- 169
++ T + + RP +V G ++T N S P
Sbjct: 1536 QWLGCSTNATFNFHPSVRPIPLELHVQ----------GLNITH----NASRVAAMSKPVY 1581
Query: 170 DAVLHLVQGNLMVLIFCSSKIA-------CSNLALRLQFDRFPGTKEYKKQEKEDLIEAL 222
+A++ +++ S K+A + A Q +RF E++D+ L
Sbjct: 1582 NAIVKFSPHKPVIVFVTSRKLARLTAIDVLTYCAAEQQPNRF------FHAEEDDIKPFL 1635
Query: 223 KEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLP 282
D L+E + GVAY H LT ++R++E+ + +G +QI CT L +N+
Sbjct: 1636 DRMTD----KTLKETLSQGVAYMHEGLTTSDQRMVEQLFDSGAVQIAICTRDLCWALNIS 1691
Query: 283 AQRVIIRDS--YVGR----DFISLNMYKQMVGRAGRTGLQESGESIMLCK-TMQDFLRFS 335
A VII D+ Y GR D + QMV RA R + +++++C+ + +DF +
Sbjct: 1692 AHLVIIMDTQFYNGRSHSYDDYPITDVMQMVARANRPLEDDDAKAVLMCQSSKKDF--YK 1749
Query: 336 SMMNAGPEPISSHMD 350
+N P P+ SH+D
Sbjct: 1750 KFLNE-PLPVESHLD 1763
>gi|242789720|ref|XP_002481421.1| DEAD/DEAH box DNA helicase (Mer3), putative [Talaromyces stipitatus
ATCC 10500]
gi|218718009|gb|EED17429.1| DEAD/DEAH box DNA helicase (Mer3), putative [Talaromyces stipitatus
ATCC 10500]
Length = 1363
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 100/356 (28%), Positives = 172/356 (48%), Gaps = 64/356 (17%)
Query: 6 YQSLAKA--AEEFKFYLEEYAGVKGQYP--------PTKRQLNKKSIYICTIEKGSKLIG 55
YQ+ +A +E F+ + +++A + Q R + SI I T EK +
Sbjct: 212 YQAPTRALCSERFRDWSKKFASLGLQCAELTGDTDYAQSRLVQTASIIITTPEKWDSMTR 271
Query: 56 SLIQENRIDE-IGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINA 114
+++ + + L +IDE H+LNE RG LE VVS++ + +++ A+SATI N
Sbjct: 272 RWRDHSKLMQLVKLFLIDEVHVLNE-TRGAALEAVVSRMKSVGSNVRFIALSATIPNSED 330
Query: 115 LSTFI-----------EGITYVENSRPTKHSEYV-----TVDKRVFQSFDGKSLTEIYAD 158
++T++ + E+ RPTK ++V T + F G L EI +
Sbjct: 331 IATWLGKNDMLQHLPAHKEHFGEDFRPTKLQKFVYGYPCTGNDFAFDRLLGSKLPEIISK 390
Query: 159 NLDYSLTGSGPDAVLHLVQGNLMVLIFC---SSKIACSNLALRLQFDRFPGTKEYKKQEK 215
+ + P ++IFC +S I+ + +L + P + + +
Sbjct: 391 H-----SNRKP------------MMIFCCTRNSAISTAKELAKLWSNTIPQRRLWAGPVR 433
Query: 216 EDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTL 275
+ A+K +T+L+ + GVA+HHA L + +R +E+A+L G + IICCTSTL
Sbjct: 434 ---MPAVK-------NTDLKAFVASGVAFHHAGLDSDDRHAVEKAFLEGKISIICCTSTL 483
Query: 276 AAGVNLPAQRVIIRDSYVG-----RDFISLNMYKQMVGRAGRTGLQESGESIMLCK 326
A GVNLP VII+++ +++ L M QM+GRAGR ++ +++L K
Sbjct: 484 AVGVNLPCYLVIIKNTVCWQEGGCKEYTDLEMM-QMLGRAGRPQFDDTAVAVILTK 538
>gi|224143027|ref|XP_002324824.1| predicted protein [Populus trichocarpa]
gi|222866258|gb|EEF03389.1| predicted protein [Populus trichocarpa]
Length = 200
Score = 115 bits (289), Expect = 6e-23, Method: Composition-based stats.
Identities = 56/95 (58%), Positives = 66/95 (69%)
Query: 230 LSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIR 289
L + LEE + GVAYHHA LT ER +IE Y G L+I+ TSTLAAGVNLPA+RVI R
Sbjct: 105 LDSTLEETLPSGVAYHHAGLTVEEREIIETCYRKGLLRILTATSTLAAGVNLPARRVIFR 164
Query: 290 DSYVGRDFISLNMYKQMVGRAGRTGLQESGESIML 324
+GRDFI Y+QM GRAGRTG+ GES+ L
Sbjct: 165 QPRIGRDFIDGTRYRQMAGRAGRTGIDTKGESVSL 199
>gi|343424807|emb|CBQ68345.1| probable ATP dependent RNA helicase [Sporisorium reilianum SRZ2]
Length = 2219
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 126/478 (26%), Positives = 215/478 (44%), Gaps = 76/478 (15%)
Query: 9 LAKAAEEFKFYLEEYAGV----KGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRID 64
+++ A F+ L+ Y V G TK Q+ + I + T EK + + +
Sbjct: 590 VSEQAANFRERLQPYGIVVNELTGDSQLTKAQIAETQIIVTTPEKWDVISRKSTDTSYTN 649
Query: 65 EIGLIVIDEFHMLNEPQRGPILECVVSKVL----YLKKSIQIFAMSATIGNINALSTFIE 120
+ L+++DE H+L++ RGP+LE ++S+ + L +++ +SAT+ N ++TF+
Sbjct: 650 LVRLLIVDEIHLLHD-DRGPVLEAIISRTIRRMEQLNDPVRLVGLSATLPNYQDVATFLR 708
Query: 121 -----GITYVE-NSRPTK-HSEYVTV-DKRVFQSFDGKSLTEI-YADNLDYSLTGSGPDA 171
G+ Y E N RP EYV + +K+ + + E+ Y LD +
Sbjct: 709 VNPKTGLFYFEANYRPCPLKQEYVGITEKKAIKRL--LVMNEVTYEKTLDQA-------- 758
Query: 172 VLHLVQGNLMVLIFCSSKIACSNLALRLQ--------FDRF-PGTKEYKKQEKEDLIEAL 222
G VLIF S+ + A ++ +RF P + + E L
Sbjct: 759 ------GKNQVLIFVHSRKETAKTAKFIRDRAMEQDTLNRFLPPSPASQ--------EVL 804
Query: 223 KEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLP 282
+ E D +L++ + YG HHA ++ +R L+E + G LQ++ T+TLA GVNLP
Sbjct: 805 RSELDNVTDADLKDVMPYGFGIHHAGMSRLDRELVEALFADGHLQVLVSTATLAWGVNLP 864
Query: 283 AQRVIIRDSYV-----GR--DFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFS 335
A VII+ + + GR + +M QM+GRAGR GE I++ + +
Sbjct: 865 AHTVIIKGTQIYNPEKGRWCEITPQDML-QMLGRAGRPQFDTFGEGIIIT-NHSELQYYL 922
Query: 336 SMMNAGPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFY--QLKSP----- 388
S++N PI S + +L E+V + + E V L +T Y L+SP
Sbjct: 923 SLLNQQ-LPIESQLVSKLADNLNAEIVLGTIRNRDEAVAWL-GYTYLYVRMLRSPTLYSV 980
Query: 389 ----EDQQTFLETTLSEIV---ASLLASKGTMLTMNEAGHLSLTSIAKAAVQAGLSHD 439
D FLE ++I+ A+LL G + G+ + + + A ++HD
Sbjct: 981 TADYADDDPFLEQKRADIIHTAAALLEKCGLLRYERRTGNFTSNELGRIASHYYITHD 1038
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 63/127 (49%), Gaps = 11/127 (8%)
Query: 214 EKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTS 273
E EDL L+ D +L E + G+AY+H LT +RR++E + A ++++ +
Sbjct: 1647 EMEDLEPHLQRVQDREL----RELLASGIAYYHEGLTKNDRRIVERLFAADAIRVVVASK 1702
Query: 274 TLAAGVNLPAQRVIIRD--SYVGRDF----ISLNMYKQMVGRAGRTGLQESGESIMLCK- 326
A + L A V+I +Y GR+ +L QMVGR + + +MLC+
Sbjct: 1703 QTAWSIPLTAHLVLIMSLQTYEGREHRYVDYALADVLQMVGRCSVPNDEGTCRLVMLCQA 1762
Query: 327 TMQDFLR 333
T +D+ +
Sbjct: 1763 TRKDYFK 1769
Score = 43.1 bits (100), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 24/103 (23%), Positives = 43/103 (41%), Gaps = 4/103 (3%)
Query: 21 EEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEP 80
+E G+ G+ R L + ICT E L Q + + L + DE HM+ +
Sbjct: 1446 KEVVGLTGETSADLRLLEMADVVICTPEHWDVLSRRWRQRKNVQTVALYIFDEIHMIGDT 1505
Query: 81 QRGPILECVVSKVLYLKKSIQ----IFAMSATIGNINALSTFI 119
+ GP E S+ ++ Q + A+S + N + ++
Sbjct: 1506 RVGPTYEIAASRARFVAAQTQNATRMVALSVPLANARDVGDWL 1548
>gi|169602869|ref|XP_001794856.1| hypothetical protein SNOG_04437 [Phaeosphaeria nodorum SN15]
gi|111067077|gb|EAT88197.1| hypothetical protein SNOG_04437 [Phaeosphaeria nodorum SN15]
Length = 2208
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 124/470 (26%), Positives = 227/470 (48%), Gaps = 50/470 (10%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V E+ + K E + + E G + TK+Q+ + I + T EK +
Sbjct: 600 LVAEQVGNFGKRLEPYGIKVAELTGDRQL---TKQQIAETQIIVTTPEKYDVITRKATDT 656
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKS----IQIFAMSATIGNINALS 116
+ I+ + LI IDE H+L++ +RGP++E +VS+ L + ++I +SAT+ N ++
Sbjct: 657 SYINLVRLICIDEIHLLHD-ERGPVIESIVSRTLRRSEQTGDHVRIVGLSATLPNYRDVA 715
Query: 117 TFI-----EGITYVENS-RPTK-HSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGP 169
+F+ +G+ + + + RP E++ V D K++ ++ N D T
Sbjct: 716 SFLRVDPDKGLFHFDGTFRPCPLKQEFIGVT-------DKKAIKQLKMMN-DVCYTKVLE 767
Query: 170 DAVLHLVQGNLMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLI--EALKEEND 227
H Q +LIF S+ + A ++ D+ + K + D E L+EE++
Sbjct: 768 QVGEHRNQ----MLIFVHSRKETAKTAKYIR-DKALEEESIGKILRSDAASREILREESE 822
Query: 228 GKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVI 287
+ +L++ + YG HHA ++ +R ++E+ + G++Q++ CT+TLA GVNLPA VI
Sbjct: 823 AVQNADLKDVMPYGFGIHHAGMSRADRTIVEDLFADGSIQVLVCTATLAWGVNLPAHTVI 882
Query: 288 IRDSYV----GRDFISLNMYK--QMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAG 341
I+ + + ++ L+ QM+GRAGR GE I++ T + + S++N
Sbjct: 883 IKGTQIYSPEKGSWVELSPQDVLQMLGRAGRPQYDTYGEGIIIT-TQAEIQYYLSLLNQQ 941
Query: 342 PEPISSHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQ-LKSPE--------DQQ 392
PI S + +L E+V N+ + E V L LF + L+SP +
Sbjct: 942 -LPIESQLVGKLADNLNAEIVLGNVRTRDEAVDWLGYTYLFVRMLRSPGLYRVGPEYEND 1000
Query: 393 TFLETTLSEIV--ASLLASKGTMLTMN-EAGHLSLTSIAKAAVQAGLSHD 439
T LE ++V A+ + K ++L + + G L T + + A +SH+
Sbjct: 1001 TVLEQRRVDLVHAAAHVLEKCSLLKYDKKTGALQPTELGRIASHYYISHN 1050
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 75/370 (20%), Positives = 156/370 (42%), Gaps = 44/370 (11%)
Query: 35 RQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKV- 93
R L K + + T + + + + + +++ DE HML G + E VVS++
Sbjct: 1474 RLLEKGDLILATPAQWDSISRQWQRRKNVQTVAVLIADELHMLGG-FGGHVYEIVVSRMQ 1532
Query: 94 ---LYLKKSIQIFAMSATIGNINALSTFIEGITY-VENSRPTKHSEYVTVDKRVFQSFDG 149
L+ ++I +S ++ N + +I + + N P + + + + F
Sbjct: 1533 AMAAQLESKLRIVGLSVSLANARDIGEWIGANKHTIYNFSPAIRAVPLELKIQSFTIPHF 1592
Query: 150 KSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRL--------QF 201
SL A ++T PD +IF ++ N A+ L
Sbjct: 1593 PSLMMAMARPTYSAITQLSPDKP---------AMIFAPNRKQARNSAVDLYAACVADEDE 1643
Query: 202 DRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAY 261
DRF E E++ L++ N+ LS +L +G+ Y H L + +++ ++ +
Sbjct: 1644 DRFLNV------ELEEIQPILEKINEQALSKSLS----HGIGYFHEALNSFDKKAVQHLF 1693
Query: 262 LAGTLQIICCTSTLAAGVNLPAQRVIIRDS--YVGRD--FISLNMYK--QMVGRAGRTGL 315
G +Q++ + ++ A VI++ + Y GR+ ++ + + QM G+AGR G
Sbjct: 1694 KVGAIQVLIVSRNSCWEIDNSAHLVIVQGTQFYEGREHRYVDYPISEILQMFGKAGRVGQ 1753
Query: 316 QESGESI-MLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAANLCSSLEDVK 374
+S + + ML +++ + +N PI S++ L D + +++ S ++
Sbjct: 1754 DKSAKGVLMLPAVKREY--YKKFLNEA-LPIESYLH-DYLHDAFVAEISSKTIESTQEAV 1809
Query: 375 TLIKHTLFYQ 384
+T FY+
Sbjct: 1810 DWSTYTYFYR 1819
>gi|406861761|gb|EKD14814.1| meiotic helicase [Marssonina brunnea f. sp. 'multigermtubi' MB_m1]
Length = 1647
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 89/322 (27%), Positives = 150/322 (46%), Gaps = 39/322 (12%)
Query: 36 QLNKKSIYICTIEKGSKLIGSLIQENR-IDEIGLIVIDEFHMLNEPQRGPILECVVSKVL 94
++ +I + T EK + + + + L +IDE H+L + RG LE VVS++
Sbjct: 450 RVRNATIIVTTPEKWDSITRKWSDHQKLVQMVKLFLIDEVHILKD-TRGATLEAVVSRMK 508
Query: 95 YLKKSIQIFAMSATIGNINALSTFI-----------EGITYVENSRPTKHSEYVTVDKRV 143
+ S++ A+SAT+ N ++ ++ T+ E RP K ++V
Sbjct: 509 TIGASVRFVALSATVPNSEDIAAWLGRDHTNHQIPAHRETFGEEFRPVKLQKHV------ 562
Query: 144 FQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRLQFDR 203
FDG + LD L P+ + Q +++FC ++ +C A +
Sbjct: 563 -HGFDGNFNDFAFEKFLDGKL----PNLIKQYSQKK-PIMVFCFTRKSCEGTATMM---- 612
Query: 204 FPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLA 263
+ + +Q+ D + + S L E + GVAYHHA L +R +E A+L
Sbjct: 613 ---AEWWTRQKFSDRAWSQPSQTVPVSSRELRELVSCGVAYHHAGLDPQDRAAVENAFLR 669
Query: 264 GTLQIICCTSTLAAGVNLPAQRVIIRDSYVGRDFISLNMYK-----QMVGRAGRTGLQES 318
G + IICCTSTLA GVNLP V+++ + VG L Y QM+GRAGR +S
Sbjct: 670 GDVNIICCTSTLAVGVNLPCHLVVLKGT-VGFQDGRLTEYSDLEVMQMLGRAGRPQFDDS 728
Query: 319 GESIMLCKTMQDFLRFSSMMNA 340
++++ ++ + R+ MM+
Sbjct: 729 AVAVIMTRSDK-VDRYKKMMSG 749
>gi|452839808|gb|EME41747.1| hypothetical protein DOTSEDRAFT_177082 [Dothistroma septosporum
NZE10]
Length = 1995
Score = 115 bits (289), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 104/376 (27%), Positives = 179/376 (47%), Gaps = 40/376 (10%)
Query: 33 TKRQLNKKSIYICTIEKGSKLIGSLIQENR-IDEIGLIVIDEFHMLNEPQRGPILECVVS 91
TK ++ + I + T EK + + + ++ L++IDE HML++ +RG +LE +V+
Sbjct: 382 TKAEIVQTQIIVTTPEKWDVVTRKSTGDTELVQKVRLLIIDEVHMLHD-ERGAVLESLVA 440
Query: 92 K----VLYLKKSIQIFAMSATIGNINALSTFIE-----GITYVENS-RPTKHSEYVTVDK 141
+ V + I+I +SAT+ N ++ F++ G+ Y + S RP ++
Sbjct: 441 RTERQVESTQSLIRIVGLSATLPNYVDVADFLKVNRMAGLFYFDQSFRPVPLEQH----- 495
Query: 142 RVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRLQF 201
F GK T+ DN+D + + V +++ +++F S+ A RL +
Sbjct: 496 --FLGVKGKPGTKTSRDNID----NTAFEKVKDMLERGHQIMVFVHSRKDTVKTA-RLLY 548
Query: 202 DRFPGTKE-----YKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRL 256
++ T+E + E +ALK+ K + E + G+ HHA + +R +
Sbjct: 549 EK--ATEEGLTDLFDPSSHEGYTQALKDVKQSK-GREIRELVAKGMGTHHAGMPRSDRNM 605
Query: 257 IEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYV----GRDFISLNMYK--QMVGRA 310
IE + G L+++CCT+TLA GVNLPA VII+ + + F+ L + Q+ GRA
Sbjct: 606 IERLFAEGVLKVLCCTATLAWGVNLPAAAVIIKGTQLYSAEAGKFVDLGILDVLQIFGRA 665
Query: 311 GRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAANLCSSL 370
GR Q++G I + T QD L+ +PI S + +L EV + S
Sbjct: 666 GRPQYQDTG--IGMIITSQDKLQHYLTAVTQQQPIESQFSKKLVDNLNAEVALGTVTSIP 723
Query: 371 EDVKTLIKHTLFYQLK 386
E V L LF ++K
Sbjct: 724 EAVTWLGYSYLFVRMK 739
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 94/344 (27%), Positives = 151/344 (43%), Gaps = 53/344 (15%)
Query: 1 MVHEKYQSLAKA-AEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQ 59
+V E+ Q K + L E + G P R + I + T EK + S
Sbjct: 1196 LVRERVQDWGKRLTRQMGLKLVE---LTGDNTPDTRTIRDADIIVTTPEKWDGISRSWQT 1252
Query: 60 ENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYL----KKSIQIFAMSATIGNINAL 115
+ + ++ L++IDE H+L RGPILE +VS++ Y+ K S+++ MS N L
Sbjct: 1253 RSYVQQVSLVIIDEIHLLGG-DRGPILEIIVSRMNYIASQKKGSVRLIGMSTACANAMDL 1311
Query: 116 STFI---EGITYVENS-RPTKHSEYVT--VDKRVF----QSFDGKSLTEIYADNLDYSLT 165
+ ++ EG+ +S RP Y+ ++R F QS + + I + + D
Sbjct: 1312 ANWLGVKEGLFNFRHSVRPVPLEIYIDGFPEQRGFCPLMQSMNRPTFLAIKSHSPDKP-- 1369
Query: 166 GSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQ----EKEDLIEA 221
V++F +S+ A L F G ++ ++ ++DL
Sbjct: 1370 ----------------VIVFVASRRQTRLTARDLI--NFCGMEDNPRRFVHMSEDDLALN 1411
Query: 222 LKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNL 281
L D L E + +G+ HHA L +R+L EE + +QI+ TSTLA GVNL
Sbjct: 1412 LDRVKDDAL----REAMSFGIGLHHAGLVESDRQLSEELFANNKIQILVATSTLAWGVNL 1467
Query: 282 PAQRVIIRDSYV------GRDFISLNMYKQMVGRAGRTGLQESG 319
PA V+++ + G + L QM+GRAGR SG
Sbjct: 1468 PAHLVVVKGTQFFDAKIEGYKDMDLTDVLQMLGRAGRPQFDTSG 1511
>gi|380488999|emb|CCF36997.1| pre-mRNA-splicing helicase BRR2, partial [Colletotrichum
higginsianum]
Length = 1156
Score = 115 bits (289), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 128/508 (25%), Positives = 231/508 (45%), Gaps = 62/508 (12%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V E+ + K E + + E G + TK+Q+ + I + T EK +
Sbjct: 595 LVQEQVGNFGKRLEPYGVKVSELTGDRQL---TKQQIAETQIIVTTPEKWDVITRKATDL 651
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVL----YLKKSIQIFAMSATIGNINALS 116
+ + L++IDE H+L++ RGP+LE +VS+ + + +++ +SAT+ N ++
Sbjct: 652 TYTNLVRLVIIDEIHLLHD-DRGPVLESIVSRTIRKTEQTGEPVRLVGLSATLPNYKDVA 710
Query: 117 TFIE-----GITYVENS-RPTK-HSEYVTV-DKRVFQSFDGKSLTEIYADNLDYSLTGSG 168
+F+ G+ + + S RP E++ V D++ + K++ ++ + +
Sbjct: 711 SFLRVDINTGLFHFDGSFRPCPLRQEFIGVTDRKAIKQL--KTMNDVTYNKV-------- 760
Query: 169 PDAVLHLVQGNLMVLIFCSSKIACSNLA--LR---LQFDRFPGTKEYKKQEKEDLIEALK 223
+ H+ +LIF S+ + A +R L+ D + +E L EA
Sbjct: 761 ---IEHVGANRNQMLIFVHSRKETAKTARYIRDKALEMDTINQILRHDAGSREVLNEAAS 817
Query: 224 EENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPA 283
+ D +L++ + YG HHA + +R +E+ + G +Q++ CT+TLA GVNLPA
Sbjct: 818 QATD----KDLKDILPYGFGIHHAGMNRIDRTDVEDLFARGAIQVLVCTATLAWGVNLPA 873
Query: 284 QRVIIRDSYV----GRDFISLNMYK--QMVGRAGRTGLQESGESIMLCKTMQDFLRFSSM 337
VII+ + V ++ L+ QM+GRAGR GE I++ T + + S+
Sbjct: 874 HTVIIKGTSVYSPEKGSWVELSPQDVLQMLGRAGRPQFDTYGEGIIIT-TQNEIQYYLSL 932
Query: 338 MNAGPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQ-LKSP-------- 388
+N PI S + +L EVV N+ S E V+ L LF + L+SP
Sbjct: 933 LNQ-QLPIESQFVSKLVDNLNAEVVLGNVRSRDEGVEWLGYTYLFVRMLRSPGLYQVGAE 991
Query: 389 -EDQQTFLETTLSEI--VASLLASKGTMLTMNEAGHLSLTSIAKAAVQAGLSHDVCLIIY 445
ED + + + I AS+L + + G L T + + A ++H + Y
Sbjct: 992 YEDDEALEQKRVDLIHSAASVLRKSNLVKYDEKTGKLQSTELGRIASHYYITHG-SMETY 1050
Query: 446 SDLLHNKLNFCLL---NSLHMLFLVIPL 470
++L+ + L SL F IP+
Sbjct: 1051 NNLIQPSITTIELFRVFSLSAEFKYIPV 1078
>gi|383854022|ref|XP_003702521.1| PREDICTED: putative U5 small nuclear ribonucleoprotein 200 kDa
helicase-like [Megachile rotundata]
Length = 2134
Score = 115 bits (289), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 122/480 (25%), Positives = 218/480 (45%), Gaps = 93/480 (19%)
Query: 28 GQYPPTKRQLNKKSIYICTIEK--------GSKLIGSLIQENRIDEIGLIVIDEFHMLNE 79
G + T+ Q+ + +CT EK G K SL++ LI+IDE H+L++
Sbjct: 565 GDHQLTREQIAATQVIVCTPEKWDIITRKGGEKTFTSLVR--------LIIIDEIHLLHD 616
Query: 80 PQRGPILECVVSKVLY----LKKSIQIFAMSATIGNINALSTFIE-----GITYVENS-R 129
+RGP+LE +V++ + ++ +++ +SAT+ N ++TF+ G+ Y +NS R
Sbjct: 617 -ERGPVLEALVARTIRNIETTQEDVRLIGLSATLPNYQDVATFLRIKPETGLFYFDNSFR 675
Query: 130 PTK-HSEYVTV-DKRVFQSFDGKSLTEI-YADNLDYSLTGSGPDAVLHLVQGNLMVLIFC 186
P +Y+ V +K+ + F + + EI Y ++++ G VL+F
Sbjct: 676 PVALEQQYIGVTEKKALKRF--QVMNEIVYEKTMEHA--------------GRNQVLVFV 719
Query: 187 SSKIACSNLALRL-----------QFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLE 235
S+ A + QF R E +E L+ E + + L+
Sbjct: 720 HSRKETGKTARAIRDMCLEKDTLGQFLR----------EGSASMEVLRTEAEQVKNQELK 769
Query: 236 ECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYV-- 293
+ + YG A HHA +T +R L+E+ + +Q++ T+TLA GVNLPA VII+ + V
Sbjct: 770 DLLPYGFAIHHAGMTRVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQVYN 829
Query: 294 ---GRDFISLNMYK--QMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSH 348
GR ++ L+ QM+GRAGR GE I++ + + S++N PI S
Sbjct: 830 PEKGR-WVELSALDVLQMLGRAGRPQYDTKGEGILIT-NHSELQYYLSLLNQQL-PIESQ 886
Query: 349 MDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFY--QLKSPE---------DQQTFLET 397
+ + D++ + ++ D T + +T Y L+ P + LE
Sbjct: 887 L-ISKMSDMLNAEIVLGTIQNIRDAVTWLGYTYLYIRMLRCPNLYGINHDKLKEDPLLEL 945
Query: 398 TLSEIVASL---LASKGTMLTMNEAGHLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLN 454
++++ S L G + ++G+ T + + A +HD + IY+ LL L+
Sbjct: 946 HRADLIHSAAVGLDRSGLIKYDRKSGNFQATELGRIASHYYCTHD-TMSIYNQLLKRTLS 1004
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 84/334 (25%), Positives = 144/334 (43%), Gaps = 43/334 (12%)
Query: 37 LNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLY- 95
L K I I T +K L Q + I L ++DE ++ + GP+LE S+ Y
Sbjct: 1413 LAKGQIIITTADKWDVLSRRWKQRKNVQNIQLFIVDELQLIG-GEEGPVLEVACSRARYI 1471
Query: 96 ---LKKSIQIFAMSATIGNINALSTFIEG-----ITYVENSRPTKHSEYVTVDKRVFQSF 147
L K +I A+SA++ + + ++ + + RP +V
Sbjct: 1472 SSQLDKPTRIIALSASLADAKDAAQWLGAPAAATFNFHPSVRPVPLELHVQ--------- 1522
Query: 148 DGKSLTEIYADNLDYSLTGSGP--DAVLHLVQGNLMVLIFCSSKIACSNLALRLQFDRFP 205
G ++T N + P +AVL ++ + + A L F
Sbjct: 1523 -GINITH----NASRLAAMAKPVYNAVLRYASHKPVICFVPTRRQARLTAIDLLTFTAAE 1577
Query: 206 G-TKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAG 264
G + E+ D+ L D L+E + GVAY H L+A +RRL+E+ + +G
Sbjct: 1578 GQPSRFFHAEEADIKPFLDRMTD----KTLKETLSQGVAYLHEGLSADDRRLVEQLFDSG 1633
Query: 265 TLQIICCTSTLAAGVNLPAQRVIIRDS--YVGR-----DFISLNMYKQMVGRAGRTGLQE 317
+QI T L G+++ + VI+ D+ Y G+ D+ ++ QMV RA R +
Sbjct: 1634 AIQIAVATRDLCWGLSITSHLVIVMDTQCYNGKTHAYEDYPITDVL-QMVARANRPLEDD 1692
Query: 318 SGESIMLCK-TMQDFLRFSSMMNAGPEPISSHMD 350
+ ++LC+ + +DF F +N P P+ SH+D
Sbjct: 1693 DAKCVLLCQSSKKDF--FKKFLNE-PLPVESHLD 1723
>gi|302692052|ref|XP_003035705.1| hypothetical protein SCHCODRAFT_255881 [Schizophyllum commune H4-8]
gi|300109401|gb|EFJ00803.1| hypothetical protein SCHCODRAFT_255881 [Schizophyllum commune H4-8]
Length = 1362
Score = 115 bits (289), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 92/302 (30%), Positives = 145/302 (48%), Gaps = 32/302 (10%)
Query: 41 SIYICTIEKGSKLIGSLIQENRI-DEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKS 99
+I I T EK L + + ++ +I L ++DE H+LNE RG LE V+S++ S
Sbjct: 233 TIIITTGEKWDSLTRNWSEHGQVLSQIQLFLVDEVHILNE-SRGSTLEVVISRMKTRGTS 291
Query: 100 IQIFAMSATIGNINALSTFIEGI----------TYVENSRPTKHSEYVTVDKRVFQSFDG 149
++ +SAT+ NI ++ ++ + E RP K + +V R S D
Sbjct: 292 VRFVMVSATVPNIQDIANWVGSARNREKPAKVYEFGEEYRPCKLTRHVVSVPRQKNSNDF 351
Query: 150 KSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRLQFDRFPGTKE 209
+ +A LDY L L L +L+F +++ A +L+ D E
Sbjct: 352 Q-----FAKILDYKLF-----ETLQLYSSGKPILVFVATRKGVFGTADQLKKD----YDE 397
Query: 210 YKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQII 269
K+++ N LEE LYG+ HHA L +RR EE YL L+I+
Sbjct: 398 AMKKKQTLPWSKPPRSNYAFNDKRLEELALYGIGVHHAGLGMDDRRATEELYLNRKLRIV 457
Query: 270 CCTSTLAAGVNLPAQRVIIRDSYVGR-----DFISLNMYKQMVGRAGRTGLQESGESIML 324
TSTLA GVNLPA V+I+ ++ + ++ L++ QM+GRAGR + G +I+L
Sbjct: 458 IATSTLAVGVNLPAHTVVIKGVHMFQNNMMIEYSDLDIV-QMLGRAGRPQFDKEGVAIIL 516
Query: 325 CK 326
C+
Sbjct: 517 CE 518
>gi|67480341|ref|XP_655520.1| DEAD/DEAH box helicase [Entamoeba histolytica HM-1:IMSS]
gi|56472666|gb|EAL50132.1| DEAD/DEAH box helicase, putative [Entamoeba histolytica HM-1:IMSS]
gi|449702527|gb|EMD43153.1| U5 small nuclear ribonucleoprotein 200 kDa helicase, putative
[Entamoeba histolytica KU27]
Length = 1804
Score = 115 bits (289), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 113/438 (25%), Positives = 207/438 (47%), Gaps = 44/438 (10%)
Query: 7 QSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEI 66
+ L+ ++ K + + G + P + K I + T EK + +++ + ++
Sbjct: 1066 EKLSDWKDKLKTLGKNIVELTGDFTPDSAAIAKADIILTTPEKWDGITRLWTKKSYVQKV 1125
Query: 67 GLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSI----QIFAMSATIGNINALSTFIEGI 122
GLI++DE H+L E +RGP++E +V++ + K + +I A++ I N++ + +I G+
Sbjct: 1126 GLIILDEVHLLGE-ERGPVIEAIVTRTKQINKKLCIQTRICALTTAIANVDDMMNWI-GV 1183
Query: 123 TYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGP-DAVLHLVQGNLM 181
++S HS V + DG T+ Y + T + P + L +
Sbjct: 1184 D--KDSVFNFHSSLRPVP--LIAHIDGFP-TKAYCPRM---ATMNKPCYQAIRLHSPDKP 1235
Query: 182 VLIFCSSK----IACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEEC 237
V+IF SS+ + +L D P +++ E++ E K DG L +EC
Sbjct: 1236 VMIFVSSRRQTRLTAQDLVKFCFNDGNP--QKFLHMPFEEMNEITKSITDGIL----KEC 1289
Query: 238 ILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS--YVGR 295
+LYG+ HHA L +R + E+ + + +QI+ T+TLA GVNLPA VII+ + + G+
Sbjct: 1290 LLYGIGMHHAGLNDHDREITEKLFKSNKIQILITTATLAWGVNLPAHLVIIKGTEYFDGK 1349
Query: 296 --DFISLNMYK--QMVGRAGRTGLQESGESIMLC-KTMQDFLRFSSMMNAGPEPISSHMD 350
F+ + + QM+GRAGR G +++L + +DFLR P P+ S+ +
Sbjct: 1350 KHQFVDMPLTDVLQMMGRAGRPQYDNEGVAVILTYEPKKDFLR---KFLFEPFPLESYFE 1406
Query: 351 PPTLVDLILEVVAANLCSSLEDVK---------TLIKHTLFYQLKSPEDQQTFLETTLSE 401
L E+ N+ + E VK L+K+ +Y E FL + + +
Sbjct: 1407 TVMADQLNAEIAVGNVTNVKEAVKFLTFTYYFRRLLKNPNYYGYDGKEQIGKFLVSKVKD 1466
Query: 402 IVASLLASKGTMLTMNEA 419
+ L+++K + N+
Sbjct: 1467 ALNELVSAKCIEMDENDV 1484
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 92/325 (28%), Positives = 152/325 (46%), Gaps = 32/325 (9%)
Query: 16 FKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFH 75
FK +EE V G K + + + T EK L E +++I L+++DE H
Sbjct: 255 FKMRVEE---VTGDTNIPKAVIASTHVIVATPEKFDVLTRKQDAE-FVNDIQLLIVDEVH 310
Query: 76 MLNEPQRGPILECVVSKVLYL----KKSIQIFAMSATIGNINALSTFI----EGITYVEN 127
+L+E RG ++E +V++ L + ++ I++ +SAT+ N + FI E I + +
Sbjct: 311 LLDE-DRGAVIETIVARTLRMVESQQRPIRVVGLSATLPNYQDVGEFIRAKPENIFHFDM 369
Query: 128 S-RPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFC 186
S R S V + G T +A +L Y D +V+ V++F
Sbjct: 370 SYRAVPMSTKFIVLPEDEKENKGHQFTH-HATDLAY-------DEAEIVVKRGKQVIVFV 421
Query: 187 SSKIACSNLALR-LQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYH 245
++ A R ++ + GT EY K ++ GK +++E + G+ H
Sbjct: 422 HTRRETVLTAQRFIKRMKEKGTTEYFTGNKGREFATRIKKLQGK---DIKELLEMGIGVH 478
Query: 246 HADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGR------DFIS 299
+A + +R IE+A+ G+L+++ T+TLA GVNLPA VIIR + V D IS
Sbjct: 479 NAGMFRSDRTFIEDAFRNGSLKVLVSTATLAWGVNLPAHTVIIRGTEVFNSDKGCSDKIS 538
Query: 300 LNMYKQMVGRAGRTGLQESGESIML 324
+ QM GRAGR G I++
Sbjct: 539 ILDVLQMFGRAGRPQYDNEGAGIII 563
>gi|367013882|ref|XP_003681441.1| hypothetical protein TDEL_0D06460 [Torulaspora delbrueckii]
gi|359749101|emb|CCE92230.1| hypothetical protein TDEL_0D06460 [Torulaspora delbrueckii]
Length = 1150
Score = 115 bits (289), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 91/300 (30%), Positives = 162/300 (54%), Gaps = 31/300 (10%)
Query: 36 QLNKKSIYICTIEKGSKLIGSLIQENRIDE-IGLIVIDEFHMLNEPQRGPILECVVSKVL 94
++ + +I I T EK L +R+ E I L+++DE H+L E +RG LE V++++
Sbjct: 227 KVKRCNIIITTPEKWDLLTRKWKDYSRMFELIKLVLVDEVHILRE-RRGATLEVVLTRMN 285
Query: 95 YLKKSIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSE---YVTVDKRVFQ-SFDGK 150
L +I+I A+SATI N+ ++ +++ ++ + V++++ V+ +F+ K
Sbjct: 286 LLCDNIRIIAVSATIPNVEDIAEWLKSKASCSVAKVLAFDDSYRQVSLERWVYGVAFNNK 345
Query: 151 SLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRLQFDRFPGTKEY 210
+ E D L Y+L PD + + VLIFC ++ + + T +Y
Sbjct: 346 N--EFQHDPL-YNL--KLPD-IFRKHSKHRPVLIFCPTRASTIS------------TAKY 387
Query: 211 KKQEKEDLIEALKEENDGKLSTN-LEECILYGVAYHHADLTAGERRLIEEAYLAGTLQII 269
Q ++ KE + L +C GVA+HHA L+ G+R +E+ +L GT++++
Sbjct: 388 VAQNCYSFLQDRKEGQTCRFGDQALTDCFQNGVAFHHAGLSMGDRESVEQGFLNGTIKVL 447
Query: 270 CCTSTLAAGVNLPAQRVIIR-----DSYVGRDFISLNMYKQMVGRAGRTGLQESGESIML 324
C TSTLA GVNLPA VII+ ++ V +++ L++ QM+GRAGR ++ G +++L
Sbjct: 448 CSTSTLAVGVNLPAYLVIIKGTRMWNASVAQEYTQLDIM-QMIGRAGRPQFEKDGCAVIL 506
>gi|452841988|gb|EME43924.1| hypothetical protein DOTSEDRAFT_71659 [Dothistroma septosporum NZE10]
Length = 2202
Score = 115 bits (288), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 116/445 (26%), Positives = 208/445 (46%), Gaps = 55/445 (12%)
Query: 33 TKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSK 92
TK+Q+ + + T EK + + + + LI IDE H+L++ RGP+LE +VS+
Sbjct: 622 TKQQIADTQVIVTTPEKWDVITRKATDTSYTNLVRLICIDEIHLLHD-DRGPVLESIVSR 680
Query: 93 VLYLKKS----IQIFAMSATIGNINALSTFIEGIT------YVENSRPTK-HSEYVTV-D 140
+ + ++I +SAT+ N ++TF+ T + RP E++ V D
Sbjct: 681 TIRRTEQTGDPVRIVGLSATLPNYRDVATFLRVDTQRDLFHFDGTFRPCPLKQEFIGVTD 740
Query: 141 KRVFQSFDGKSLTEI-YADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRL 199
K+ + K++ ++ Y L+ + Q +LIF S+ + A
Sbjct: 741 KKAIKQL--KTMNDVCYNKTLE------------QVGQNKNQMLIFVHSRKETAKTA--- 783
Query: 200 QFDRFPGTKEYKKQE--KEDLI--EALKEENDGKLSTNLEECILYGVAYHHADLTAGERR 255
++ R +E K + + D E L+EE + +T+L++ + YG HHA ++ +R
Sbjct: 784 KYIRDKALEEDKIGQILRTDAASREILREEAESVTNTDLKDVLPYGFGIHHAGMSRADRT 843
Query: 256 LIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYV----GRDFISLNMYK--QMVGR 309
+E+ + G +Q++ CT+TLA GVNLPA VII+ + + ++ L+ QM+GR
Sbjct: 844 AVEDLFADGAIQVLVCTATLAWGVNLPAHTVIIKGTQIYSPEKGSWVELSPQDVLQMLGR 903
Query: 310 AGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAANLCSS 369
AGR GE I++ T + + S+MN PI S +L E+V N+ +
Sbjct: 904 AGRPQYDTYGEGIIIT-TQTEIQYYLSLMNQQ-LPIESQFVSRLADNLNAEIVLGNIRTR 961
Query: 370 LEDVKTLIKHTLF---------YQLKSPEDQQTFLETTLSEIVASLLA--SKGTMLTMN- 417
E V+ L LF YQ+ ++ LE +++ S A K +++ +
Sbjct: 962 DEGVEWLGYTYLFVRMLRTPNLYQVGQDIEEDPTLEQKRVDLIHSAAAVLEKASLIKYDK 1021
Query: 418 EAGHLSLTSIAKAAVQAGLSHDVCL 442
+ G L T + + A ++H+ L
Sbjct: 1022 KTGRLQSTDLGRVASHYYITHNSML 1046
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 74/346 (21%), Positives = 141/346 (40%), Gaps = 52/346 (15%)
Query: 63 IDEIGLIVIDEFHMLNEPQRGPILECVVSKV----LYLKKSIQIFAMSATIGNINALSTF 118
+ +GLI+ D+ HML Q G E V+S+ + L+ ++ +S ++ N + +
Sbjct: 1495 VQNVGLIIADDLHMLGG-QGGYTYEAVMSRSQAIKVQLENDLRTIGLSVSLSNARDIGEW 1553
Query: 119 IEG-----ITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVL 173
I + N+RP + ++ Q+F+ +L ++T A+L
Sbjct: 1554 IGCSKHTIFNFSPNNRPLSLNLHL-------QTFNIPHFP-----SLMLAMTKPTYQAIL 1601
Query: 174 HLVQGNLMVLIFCSSKIACSNLALRL--------QFDRFPGTKEYKKQEKEDLIEALKEE 225
++F S+ A L DRF T + E L L
Sbjct: 1602 QYAPEK-AAMVFVPSRKQVRATAQDLLAACVADDDEDRFLHT------DAEQLAPIL--- 1651
Query: 226 NDGKLST-NLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQ 284
GK+ +L E + +G+AY+H LT ++R++E + G QI+ + + A
Sbjct: 1652 --GKVKERSLAEALAHGIAYYHEALTESDKRVVEALFSQGAAQILLVSRDCCWEIQSTAH 1709
Query: 285 RVIIRDS--YVGRD--FISLNMYK--QMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMM 338
V++ + + GR+ +I + + QM G+AGR + +++C ++ +
Sbjct: 1710 LVVVMGTQFFEGREHRYIDYPISEVLQMFGKAGRPTEDKDSRGVLMCPDVK--RNYYKKF 1767
Query: 339 NAGPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQ 384
A PI S + L D + ++ S +D +T FY+
Sbjct: 1768 LAEALPIESQLQ-SYLHDAFVTEISTKTVESTQDAVDWTTYTYFYR 1812
>gi|448501392|ref|ZP_21612182.1| DEAD/DEAH box helicase [Halorubrum coriense DSM 10284]
gi|445695184|gb|ELZ47294.1| DEAD/DEAH box helicase [Halorubrum coriense DSM 10284]
Length = 662
Score = 115 bits (288), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 102/383 (26%), Positives = 165/383 (43%), Gaps = 34/383 (8%)
Query: 28 GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE--NRIDEIGLIVIDEFHMLNEPQRGPI 85
G + T L + + T EK + S I+ + +DE+ +V+DE H+L +RGP
Sbjct: 97 GDFDATGEALAGNDVVVATSEK----VDSAIRNGASWVDELACVVVDEVHLLGAKRRGPT 152
Query: 86 LECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQ 145
LE ++ + +Q A+SAT+ N +A++ +++ RP V V V
Sbjct: 153 LEVTLATLRRRNPDLQTVALSATVDNPDAIADWLDAALVESEWRPVDLRTGVAVGGAV-- 210
Query: 146 SFDGKSLTEIYADNLD-----------YSLTGSGPDAV-------LHLVQGNLMVLIFCS 187
FD + + D + PD V L F
Sbjct: 211 DFDDGTNISVDVDRDEAKADDEGGGDGEGDEADEPDPTDVTAALVADAVADGGQCLAFVR 270
Query: 188 SKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLST-NLEECILYGVAYHH 246
S+ +LA RL D E + + DG L+ L +C+ GVA+HH
Sbjct: 271 SRREAVDLAERLAEDGL--AAELGIGDAAAAAAEEATDVDGTLTGRQLADCLRAGVAFHH 328
Query: 247 ADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYV----GRDFISLNM 302
A L +G R ++E A+ + IC T TLAAGVN+PA+RV++RD G +I
Sbjct: 329 AGLRSGHRGVVESAFRERDVACICATPTLAAGVNVPARRVVVRDQRRYGEGGMAWIPTLE 388
Query: 303 YKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHM-DPPTLVDLILEV 361
QM GRAGR GL GE++++ + PE + S + DP +L +L
Sbjct: 389 VHQMCGRAGRPGLDPHGEAVLVADADTREAVRERYVEGEPEAVESQLADPGSLRTHVLAA 448
Query: 362 VAANLCSSLEDVKTLIKHTLFYQ 384
VA + ++ ++ + + T + +
Sbjct: 449 VATDFAATESEILDVFEGTFYAR 471
>gi|301773190|ref|XP_002922015.1| PREDICTED: activating signal cointegrator 1 complex subunit 3-like
[Ailuropoda melanoleuca]
gi|281347049|gb|EFB22633.1| hypothetical protein PANDA_010940 [Ailuropoda melanoleuca]
Length = 2202
Score = 115 bits (288), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 109/398 (27%), Positives = 185/398 (46%), Gaps = 53/398 (13%)
Query: 14 EEFKFYLEEYAGVK-----GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGL 68
+++K +EE G K G P + + K + + T EK + S N + ++ +
Sbjct: 1390 DDWKVRIEEKLGKKVIELTGDVTPDMKSIAKADLIVTTPEKWDGVSRSWQNRNYVKQVTI 1449
Query: 69 IVIDEFHMLNEPQRGPILECVVSKVLYL----KKSIQIFAMSATIGNINALSTFIE---- 120
++IDE H+L E +RGP+LE +VS+ ++ +K ++I +S + N L+ ++
Sbjct: 1450 LIIDEIHLLGE-ERGPVLEVIVSRTNFISSHTEKPVRIVGLSTALANARDLADWLNIHQM 1508
Query: 121 GITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNL 180
G+ N RP+ + V Q F G+ A S+ A+
Sbjct: 1509 GLF---NFRPSVRPVPLEVH---IQGFPGQHYCPRMA-----SMNKPTFQAIRSHSPAK- 1556
Query: 181 MVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQ-------EKEDLIEALKEENDGKLSTN 233
VLIF SS+ AL L F T+E KQ E E++I L++ +N
Sbjct: 1557 PVLIFVSSRRQTRLTALELI--AFLATEEDPKQWLNMDEREMENIIGTLRD-------SN 1607
Query: 234 LEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS-- 291
L+ + +G+ HHA L +R+ +EE ++ +Q++ TSTLA GVN PA VII+ +
Sbjct: 1608 LKLTLAFGIGMHHAGLHERDRKTVEELFVNCKVQVLIATSTLAWGVNFPAHLVIIKGTEY 1667
Query: 292 YVGR-----DFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPIS 346
Y G+ DF ++ QM+GRAGR + G++++L ++ F P P+
Sbjct: 1668 YDGKTRRYVDFPITDVL-QMMGRAGRPQFDDQGKAVILVHDIKK--DFYKKFLYEPFPVE 1724
Query: 347 SHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQ 384
S + L D + +A +S +D I T F++
Sbjct: 1725 SSL-LGVLSDHLNAEIAGGTITSKQDAMDYITWTYFFR 1761
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 98/373 (26%), Positives = 178/373 (47%), Gaps = 42/373 (11%)
Query: 33 TKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEI-GLIVIDEFHMLNEPQRGPILECVVS 91
+K ++ + + + T EK + + + + +I L+++DE H+L+E RGP+LE +V+
Sbjct: 571 SKNEILRTQMLVTTPEKWDVVTRKSVGDVALSQIVKLLILDEVHLLHE-DRGPVLESIVA 629
Query: 92 KVLYLKKS----IQIFAMSATIGNINALSTFIE-----GITYVENS-RPTKHSEYVTVDK 141
+ L +S I+I +SAT+ N ++TF+ G+ Y + RP
Sbjct: 630 RTLRQVESTQSMIRILGLSATLPNYLDVATFLHVNPCIGLFYFDGRFRPVP--------- 680
Query: 142 RVFQSFDG-KSLTEIYA-DNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRL 199
+ Q+F G KS ++ +N+D ++VL V+ V++F ++ A A+ L
Sbjct: 681 -LGQTFLGVKSANKVQQLNNMDEVCY----ESVLKQVKAGHQVMVFVHARNATVRTAMSL 735
Query: 200 QFDRFPGTKE---YKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRL 256
+R + + + + D A K+ + + + E G + HHA + +R L
Sbjct: 736 -IERAKNSGQISFFLPTQGPDYGHAEKQVQKSR-NKQVRELFPDGFSIHHAGMLRQDRNL 793
Query: 257 IEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS--YVGR--DFISLNMYK--QMVGRA 310
+E + G ++++ CT+TLA GVNLPA VII+ + Y + F+ L + Q+ GRA
Sbjct: 794 VENLFSNGHIKVLVCTATLAWGVNLPAHAVIIKGTQIYAAKRGSFVDLGILDVMQIFGRA 853
Query: 311 GRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAANLCSSL 370
GR + GE I++ T D L + PI S +L D + +A +++
Sbjct: 854 GRPQFDKFGEGIII--TTHDKLSHYLTLLTQQNPIESQF-LESLADNLNAEIALGTVTNV 910
Query: 371 EDVKTLIKHTLFY 383
E+ I +T Y
Sbjct: 911 EEAVKWISYTYLY 923
>gi|398346214|ref|ZP_10530917.1| DEAD/DEAH box helicase [Leptospira broomii str. 5399]
Length = 1021
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 135/522 (25%), Positives = 234/522 (44%), Gaps = 62/522 (11%)
Query: 63 IDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKS---IQIFAMSATIGNINALSTFI 119
++++GLIV+DE + +P RG I+E + S +L + + QI +SA +GNIN ++
Sbjct: 414 LNQLGLIVLDEGQFITDPNRGIIVELIFSFLLRARINGVEPQILVLSAVMGNINNFDRWL 473
Query: 120 EGITYVENSRPTKHSEYVTVDKRVFQ--SFDGKSLTE---IYADNLDYSLTGSGPDAVL- 173
+ RP E V VFQ DG E + + S D ++
Sbjct: 474 NLPVLISKKRPVPLIEGVLDRSGVFQFIDVDGTIKNEELLPFRSIVQRRDRPSSQDVIVP 533
Query: 174 ---HLVQGNLMVLIFCSSKIACSNLA--LRLQFDRFPGTKEYKKQEKEDLIEALKEENDG 228
L+ +LIF + + A L + P T+ +DL A
Sbjct: 534 LSKKLISDGEKLLIFRNQRGTAQGCAKYLASELGLKPATQVLDSLPTQDLTNA------- 586
Query: 229 KLSTNLEECILYGVAYHHADLTAGERRLIEEAY--LAGTLQIICCTSTLAAGVNLPAQRV 286
S +L C+ GVA+H+ +L ER +E+ + L + II T+TLAAG+N PA V
Sbjct: 587 --SQDLHSCLRGGVAFHNTNLLRSEREAVEKGFRNLNEEIHIIAATTTLAAGINTPASTV 644
Query: 287 IIRDSYV----GRDFISLNMYKQMVGRAGRTGLQESGESIMLCKT-MQDFLRFSSMMNAG 341
I+ ++ GR+F ++ YK M GRAGR G E+G+ I+L +T ++ F +
Sbjct: 645 ILAENKFLGEDGREF-TVAEYKNMAGRAGRVGFNETGKCIILAETSLERAQLFQKYVLGT 703
Query: 342 PEPISSHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQLKSPEDQQTF--LETTL 399
PE + S L I+ +++ S +++ L+ +T S E+ + F +E+ +
Sbjct: 704 PEEVRSSFQERDLSTWIIRLLSQVKEISQKEIPGLLINTFGGYSASLENPKWFVNIESEV 763
Query: 400 SEIVASLLASKGTMLTMNEAGHLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLN 459
+ V LL + L + + LT + +A + LS D + + L ++ ++
Sbjct: 764 NTFVERLLHIE---LAELDGDFIRLTLLGRACGSSSLSFDSSMRLVEIL--KGIDISRVS 818
Query: 460 SLHMLFLVIPLEYRIPSDGILLSRSKVYDRYT----KFHPQTLRVAEALGVTENLVALNV 515
+H+L GIL +++ YT + ++ RV++A N LNV
Sbjct: 819 PIHLL-------------GILQVLNEMDSIYTPLMRRGQTESSRVSDA----SNRYGLNV 861
Query: 516 TGKLK---DEKKALLCRFFHACILYDVLNFDNHQKVAKMYGI 554
T L+ D++ R A IL+D +N + + + K Y +
Sbjct: 862 TQSLQRYCDDQFQFWARCKRASILFDWINGERVEAIEKYYTV 903
>gi|305663977|ref|YP_003860265.1| DEAD/DEAH box helicase [Ignisphaera aggregans DSM 17230]
gi|304378546|gb|ADM28385.1| DEAD/DEAH box helicase domain protein [Ignisphaera aggregans DSM
17230]
Length = 734
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 115/400 (28%), Positives = 177/400 (44%), Gaps = 38/400 (9%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYA---GVK-GQYPPTKRQLNKKSIYICTIEKGSKLIGS 56
+V+EKYQ EF+F+ E+Y G+ G Y T+ +L + Y + +L S
Sbjct: 90 LVYEKYQ-------EFRFW-EKYGFRIGISMGDYEVTEEELKRLENYDIIVTTYERL-DS 140
Query: 57 LIQEN--RIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINA 114
+++ ++ +G IVIDE HML + RG I+E + + + IQI +SATIGN
Sbjct: 141 IMRRRPLWMNNVGTIVIDELHMLGDRSRGHIVEMIAIRAKLM--GIQIVGLSATIGNAEE 198
Query: 115 LSTFIEGITYVENSRPTKHSEYVTVDKRVFQSFDGKS---------LTEIYADNLDYSLT 165
++ ++ + RP K E V + G+S EI+ D +
Sbjct: 199 IARWLNAKLVKSDWRPVKLYE-------VIAYYSGRSEDRQWYMYLPKEIFNDQSPIVVD 251
Query: 166 GSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEE 225
+L V+ VL F S+ A LA + + L E L+E
Sbjct: 252 DITKYWILRAVKEGFNVLEFRYSRKAVEELASIYSIVLCANLDHKDRAFLDKLAEELEEY 311
Query: 226 NDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQR 285
L I G +YHHA LT RR IE A+ ++ + T TLA GVNLPA+
Sbjct: 312 VPDFEYEKLAPLIRCGASYHHAGLTPEARRFIENAFRERFIRYLAATPTLAMGVNLPARV 371
Query: 286 VIIRDSYV-GRDF--ISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGP 342
VII Y GR IS+ YKQ+ GRAGR G +++ K + S + P
Sbjct: 372 VIINTKYFNGRSLEKISVLEYKQLSGRAGRPQYDPYG-IVVVAKDSRSMNESLSYIMGVP 430
Query: 343 EPISSH-MDPPTLVDLILEVVAANLCSSLEDVKTLIKHTL 381
EPI+S + L +L V+ + ++ + + T ++
Sbjct: 431 EPITSTLLSDEALRKHVLAVIVSGEVNTFDKLITFFSNSF 470
>gi|354495891|ref|XP_003510062.1| PREDICTED: activating signal cointegrator 1 complex subunit 3-like
[Cricetulus griseus]
gi|344252055|gb|EGW08159.1| Activating signal cointegrator 1 complex subunit 3 [Cricetulus
griseus]
Length = 2202
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 107/397 (26%), Positives = 184/397 (46%), Gaps = 51/397 (12%)
Query: 14 EEFKFYLEEYAGVK-----GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGL 68
+++K +EE G K G P + + K + + T EK + S N + ++ +
Sbjct: 1391 DDWKIRIEEKLGKKVIELTGDVTPDMKSIAKADLIVTTPEKWDGVSRSWQSRNYVQQVTI 1450
Query: 69 IVIDEFHMLNEPQRGPILECVVSKVLYL----KKSIQIFAMSATIGNINALSTFIE---- 120
++IDE H+L E +RGP+LE +VS+ ++ +K ++I +S + N L+ ++
Sbjct: 1451 LIIDEIHLLGE-ERGPVLEVIVSRTNFISSHTEKPVRIVGLSTALANARDLADWLNIKQM 1509
Query: 121 GITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNL 180
G+ N RP+ + V Q F G+ A S+ A+
Sbjct: 1510 GLF---NFRPSVRPVPLEVH---IQGFPGQHYCPRMA-----SMNKPAFQAIRSHSPAK- 1557
Query: 181 MVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQ-------EKEDLIEALKEENDGKLSTN 233
VLIF SS+ AL L F T+E KQ E E++I +++ +N
Sbjct: 1558 PVLIFVSSRRQTRLTALELI--AFLATEEDPKQWLNMDEQEMENIIGTIRD-------SN 1608
Query: 234 LEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS-- 291
L+ + +G+ HHA L +R+ +EE ++ +Q++ TSTLA GVN PA VII+ +
Sbjct: 1609 LKLTLAFGIGMHHAGLHERDRKTVEELFVNCKVQVLIATSTLAWGVNFPAHLVIIKGTEY 1668
Query: 292 YVG--RDFISLNMYK--QMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISS 347
Y G R ++ + QM+GRAGR + G++++L ++ F P P+ S
Sbjct: 1669 YDGKTRRYVDFPITDVLQMMGRAGRPQFDDQGKAVILVHDIKK--DFYKKFLYEPFPVES 1726
Query: 348 HMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQ 384
+ L D + +A +S +D I T F++
Sbjct: 1727 SL-LGVLSDHLNAEIAGGTITSKQDAMDYITWTYFFR 1762
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 98/373 (26%), Positives = 177/373 (47%), Gaps = 42/373 (11%)
Query: 33 TKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEI-GLIVIDEFHMLNEPQRGPILECVVS 91
+K ++ + + + T EK + + + + +I L+++DE H+L+E RGP+LE +V+
Sbjct: 572 SKSEILRTQMLVTTPEKWDVVTRKSVGDVALSQIVKLLILDEVHLLHE-DRGPVLESIVA 630
Query: 92 KVLYLKKS----IQIFAMSATIGNINALSTFIE-----GITYVENS-RPTKHSEYVTVDK 141
+ L +S I+I +SAT+ N ++TF+ G+ Y + RP
Sbjct: 631 RTLRQVESTQSMIRILGLSATLPNYLDVATFLHVNPYIGLFYFDGRFRPVP--------- 681
Query: 142 RVFQSFDG-KSLTEIYA-DNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRL 199
+ Q+F G KS ++ +N+D ++V V+ V++F ++ A A+ L
Sbjct: 682 -LGQTFLGIKSANKMQQLNNMDEVCY----ESVWKQVKAGHQVMVFVHARNATVRTAMSL 736
Query: 200 QFDRFPGTKE---YKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRL 256
+R + + E + ALK+ + + + E G + HHA + +R L
Sbjct: 737 -IERAKNNGQISYFLPTEGPEYGHALKQVQRSR-NKQVRELFSDGFSIHHAGMLRQDRNL 794
Query: 257 IEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS--YVGR--DFISLNMYK--QMVGRA 310
+E + G ++++ CT+TLA GVNLPA VII+ + Y + F+ L + Q+ GRA
Sbjct: 795 VENLFSNGHIKVLVCTATLAWGVNLPAHAVIIKGTQIYAAKRGSFVDLGILDVMQIFGRA 854
Query: 311 GRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAANLCSSL 370
GR + GE I++ T D L + PI S +L D + +A +++
Sbjct: 855 GRPQFDKFGEGIII--TTHDKLSHYLTLLTQQNPIESQF-LESLADNLNAEIALGTVTNV 911
Query: 371 EDVKTLIKHTLFY 383
E+ I +T Y
Sbjct: 912 EEAVKWISYTYLY 924
>gi|310790810|gb|EFQ26343.1| Sec63 Brl domain-containing protein [Glomerella graminicola M1.001]
Length = 2204
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 128/509 (25%), Positives = 233/509 (45%), Gaps = 64/509 (12%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V E+ + K E + + E G + TK+Q+ + I + T EK +
Sbjct: 594 LVQEQVGNFGKRLEPYGVKVSELTGDRQL---TKQQIAETQIIVTTPEKWDVITRKATDL 650
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVL----YLKKSIQIFAMSATIGNINALS 116
+ + L++IDE H+L++ RGP+LE +VS+ + + +++ +SAT+ N ++
Sbjct: 651 TYTNLVRLVIIDEIHLLHD-DRGPVLESIVSRTIRKTEQTGEPVRLVGLSATLPNYKDVA 709
Query: 117 TFIE-----GITYVENS-RPTK-HSEYVTV-DKRVFQSFDGKSLTEIYADNLDYSLTGSG 168
+F+ G+ + + S RP E++ V D++ + K++ ++ + +
Sbjct: 710 SFLRVDINTGLFHFDGSFRPCPLRQEFIGVTDRKAIKQL--KTMNDVTYNKV-------- 759
Query: 169 PDAVLHLVQGNLMVLIFCSSKIACSNLA--LR---LQFDRFPGTKEYKKQEKEDLIEALK 223
+ H+ +LIF S+ + A +R L+ D + +E L EA
Sbjct: 760 ---IEHVGANRNQMLIFVHSRKETAKTARYIRDKALEMDTINQILRHDAGSREVLNEAAS 816
Query: 224 EENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPA 283
+ D +L++ + YG HHA + +R +E+ + G +Q++ CT+TLA GVNLPA
Sbjct: 817 QATD----KDLKDILPYGFGIHHAGMNRIDRTDVEDLFARGAIQVLVCTATLAWGVNLPA 872
Query: 284 QRVIIRDSYV----GRDFISLNMYK--QMVGRAGRTGLQESGESIMLCKTMQDFLRFSSM 337
VII+ + V ++ L+ QM+GRAGR GE I++ T + + S+
Sbjct: 873 HTVIIKGTSVYSPEKGSWVELSPQDVLQMLGRAGRPQFDTYGEGIIIT-TQNEIQYYLSL 931
Query: 338 MNAGPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQ-LKSP-------- 388
+N PI S + +L E+V N+ S E V+ L LF + L+SP
Sbjct: 932 LNQQ-LPIESQFVSRLVDNLNAEIVLGNVRSRDEGVEWLGYTYLFVRMLRSPGLYQVGAE 990
Query: 389 -EDQQTFLETTLSEIV---ASLLASKGTMLTMNEAGHLSLTSIAKAAVQAGLSHDVCLII 444
ED + LE ++V AS+L + + G L T + + A ++H +
Sbjct: 991 YEDDEA-LEQKRVDLVHSAASVLRKSNLVKYDEKTGKLQSTELGRIASHYYITHG-SMET 1048
Query: 445 YSDLLH---NKLNFCLLNSLHMLFLVIPL 470
Y++L+ + + SL F IP+
Sbjct: 1049 YNNLIQPSITTIELFRVFSLSAEFKYIPV 1077
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 75/362 (20%), Positives = 150/362 (41%), Gaps = 32/362 (8%)
Query: 37 LNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYL 96
L + + + T + L + + + L + DE H+L Q G + E +VS++ Y+
Sbjct: 1470 LERSDLVLATPIQWDVLSRQWKRRKNVSTVELFIADEVHLLGN-QMGYVYEIIVSRMHYI 1528
Query: 97 KKS----IQIFAMSATIGNINALSTFIEGITY-VENSRPTKHSEYVTVDKRVFQSFDGKS 151
+ ++I A+ ++ N L +I+ + + N P H V ++ + +S
Sbjct: 1529 RTQTELPMRIIALGVSLANARDLGEWIDAKKHDIYNFSP--HVRPVPLELHI------QS 1580
Query: 152 LTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRLQFDRFPGTKE-- 209
T + +L S+ A+ + + ++F S+ L F E
Sbjct: 1581 YTNPHFPSLMLSMAKPTYLAITQM-SADKPAIVFVPSRKQTRATTRDLLTAAFMDDDEDR 1639
Query: 210 YKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQII 269
+ E E + L N+ L+ E + +GV Y+H L+ ++R+++ Y G +Q++
Sbjct: 1640 FLHAEVEQMRPLLNRVNEEALA----EALSHGVGYYHEALSQSDKRIVKHLYEHGAIQVL 1695
Query: 270 CCTSTLAAGVNLPAQRVIIRDS--YVGRDF----ISLNMYKQMVGRAGRTGLQESGESI- 322
+ + +N A V++ + + GR+ SL+ M G+A R G +
Sbjct: 1696 VASRDVCWELNSTAHLVVVMGTQYFEGREHRYIDYSLSEILHMFGKALRASKDGRGRGVL 1755
Query: 323 MLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLF 382
ML +DF + +N P+ SH+ L D + ++ + S +D T F
Sbjct: 1756 MLPAAKRDF--YKKFLNEA-LPVESHLH-NYLHDAFVTEISTKMIESGDDAINWTTFTYF 1811
Query: 383 YQ 384
Y+
Sbjct: 1812 YR 1813
>gi|73973611|ref|XP_854167.1| PREDICTED: activating signal cointegrator 1 complex subunit 3 isoform
2 [Canis lupus familiaris]
Length = 2202
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 109/398 (27%), Positives = 185/398 (46%), Gaps = 53/398 (13%)
Query: 14 EEFKFYLEEYAGVK-----GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGL 68
+++K +EE G K G P + + K + + T EK + S N + ++ +
Sbjct: 1390 DDWKVRIEEKLGKKVIELTGDVTPDMKSIAKADLIVTTPEKWDGVSRSWQNRNYVKQVTI 1449
Query: 69 IVIDEFHMLNEPQRGPILECVVSKVLYL----KKSIQIFAMSATIGNINALSTFIE---- 120
++IDE H+L E +RGP+LE +VS+ ++ +K ++I +S + N L+ ++
Sbjct: 1450 LIIDEIHLLGE-ERGPVLEVIVSRTNFISSHTEKPVRIVGLSTALANARDLADWLNIHQM 1508
Query: 121 GITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNL 180
G+ N RP+ + V Q F G+ A S+ A+
Sbjct: 1509 GLF---NFRPSVRPVPLEVH---IQGFPGQHYCPRMA-----SMNKPTFQAIRSHSPAK- 1556
Query: 181 MVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQ-------EKEDLIEALKEENDGKLSTN 233
VLIF SS+ AL L F T+E KQ E E++I L++ +N
Sbjct: 1557 PVLIFVSSRRQTRLTALELI--AFLATEEDPKQWLNMDEREMENIIGTLRD-------SN 1607
Query: 234 LEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS-- 291
L+ + +G+ HHA L +R+ +EE ++ +Q++ TSTLA GVN PA VII+ +
Sbjct: 1608 LKLTLAFGIGMHHAGLHERDRKTVEELFVNCKVQVLIATSTLAWGVNFPAHLVIIKGTEY 1667
Query: 292 YVGR-----DFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPIS 346
Y G+ DF ++ QM+GRAGR + G++++L ++ F P P+
Sbjct: 1668 YDGKTRRYVDFPITDVL-QMMGRAGRPQFDDQGKAVILVHDIKK--DFYKKFLYEPFPVE 1724
Query: 347 SHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQ 384
S + L D + +A +S +D I T F++
Sbjct: 1725 SSL-LGVLSDHLNAEIAGGTITSKQDAMDYITWTYFFR 1761
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 102/380 (26%), Positives = 176/380 (46%), Gaps = 56/380 (14%)
Query: 33 TKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEI-GLIVIDEFHMLNEPQRGPILECVVS 91
+K ++ + + + T EK + + + + +I L+++DE H+L+E RGP+LE +V+
Sbjct: 571 SKNEILRTQMLVTTPEKWDVVTRKSVGDVALSQIVKLLILDEVHLLHE-DRGPVLESIVA 629
Query: 92 KVLYLKKS----IQIFAMSATIGNINALSTFIE-----GITYVENS-RPTKHSEYVTVDK 141
+ L +S I+I +SAT+ N ++TF+ G+ Y + RP
Sbjct: 630 RTLRQVESTQSMIRILGLSATLPNYLDVATFLHVNPCIGLFYFDGRFRPVP--------- 680
Query: 142 RVFQSFDG-KSLTEIYA-DNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRL 199
+ Q+F G KS ++ +N+D ++VL V+ V++F ++ A A+ L
Sbjct: 681 -LGQTFLGVKSANKVQQLNNMDEVCY----ESVLKQVKAGHQVMVFVHARNATVRTAMSL 735
Query: 200 --------QFDRFPGTK--EYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADL 249
Q F ++ EY EK+ K N + E G + HHA +
Sbjct: 736 IERAKNSGQISCFLPSQGSEYGHAEKQ----VQKSRN-----KQVRELFPDGFSIHHAGM 786
Query: 250 TAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS--YVGR--DFISLNMYK- 304
+R L+E + G ++++ CT+TLA GVNLPA VII+ + Y + F+ L +
Sbjct: 787 LRQDRNLVENLFSNGHIKVLVCTATLAWGVNLPAHAVIIKGTQIYAAKRGSFVDLGILDV 846
Query: 305 -QMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVA 363
Q+ GRAGR GE I++ T D L + PI S +L D + +A
Sbjct: 847 MQIFGRAGRPQFDRFGEGIII--TTHDKLSHYLTLLTQQNPIESQF-LESLADNLNAEIA 903
Query: 364 ANLCSSLEDVKTLIKHTLFY 383
+++E+ I +T Y
Sbjct: 904 LGTVTNVEEAVKWISYTYLY 923
>gi|297678771|ref|XP_002817236.1| PREDICTED: activating signal cointegrator 1 complex subunit 3 [Pongo
abelii]
Length = 2170
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 108/398 (27%), Positives = 185/398 (46%), Gaps = 53/398 (13%)
Query: 14 EEFKFYLEEYAGVK-----GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGL 68
+++K +EE G K G P + + K + + T EK + S N + ++ +
Sbjct: 1390 DDWKVRIEEKLGKKVIELTGDVTPDMKSIAKADLIVTTPEKWDGVSRSWQNRNYVQQVTI 1449
Query: 69 IVIDEFHMLNEPQRGPILECVVSKVLYL----KKSIQIFAMSATIGNINALSTFIE---- 120
++IDE H+L E +RGP+LE +VS+ ++ +K ++I +S + N L+ ++
Sbjct: 1450 LIIDEIHLLGE-ERGPVLEVIVSRTNFISSHTEKPVRIVGLSTALANARDLADWLNIKQM 1508
Query: 121 GITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNL 180
G+ N RP+ + V Q F G+ A S+ A+
Sbjct: 1509 GLF---NFRPSVRPVPLEVH---IQGFPGQHYCPRMA-----SMNKPAFQAIRSHSPAK- 1556
Query: 181 MVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQ-------EKEDLIEALKEENDGKLSTN 233
VLIF SS+ AL L F T+E KQ E E++I +++ +N
Sbjct: 1557 PVLIFVSSRRQTRLTALELI--AFLATEEDPKQWLNMDEREMENIIATVRD-------SN 1607
Query: 234 LEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS-- 291
L+ + +G+ HHA L +R+ +EE ++ +Q++ TSTLA GVN PA VII+ +
Sbjct: 1608 LKLTLAFGIGMHHAGLHERDRKTVEELFVNCKVQVLIATSTLAWGVNFPAHLVIIKGTEY 1667
Query: 292 YVGR-----DFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPIS 346
Y G+ DF ++ QM+GRAGR + G++++L ++ F P P+
Sbjct: 1668 YDGKTRRYVDFPITDVL-QMMGRAGRPQFDDQGKAVILVHDIKK--DFYKKFLYEPFPVE 1724
Query: 347 SHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQ 384
S + L D + +A +S +D I T F++
Sbjct: 1725 SSL-LGVLSDHLNAEIAGGTITSKQDALDYITWTYFFR 1761
Score = 92.4 bits (228), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 94/368 (25%), Positives = 167/368 (45%), Gaps = 32/368 (8%)
Query: 33 TKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEI-GLIVIDEFHMLNEPQRGPILECVVS 91
+K ++ + + + T EK + + + + +I L+++DE H+L+E RGP+LE +V+
Sbjct: 571 SKSEILRTQMLVTTPEKWDVVTRKSVGDVALSQIVKLLILDEVHLLHE-DRGPVLESIVA 629
Query: 92 KVLYLKKS----IQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSF 147
+ L +S I+I +SAT+ N ++TF+ Y+ D R
Sbjct: 630 RTLRQVESTQSMIRILGLSATLPNYLDVATFLHVNPYIG---------LFFFDGRFRPVP 680
Query: 148 DGKSLTEIYADNLDYSLTGSGP---DAVLHLVQGNLMVLIFCSSKIACSNLALRLQFDRF 204
G++ I N L + VL V+ V++F ++ A A+ L +R
Sbjct: 681 LGQTFLGIKCANKMQQLNNMDEVCYENVLKQVKAGHQVMVFVHARNATVRTAMSL-IERA 739
Query: 205 PGTKE---YKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAY 261
+ + D + A K+ + + + E G + HHA + +R L+E +
Sbjct: 740 KNCGHIPFFFPTQGHDYVLAEKQVQRSR-NKQVRELFPDGFSIHHAGMLRQDRNLVENLF 798
Query: 262 LAGTLQIICCTSTLAAGVNLPAQRVIIRDS--YVGR--DFISLNMYK--QMVGRAGRTGL 315
G ++++ CT+TLA GVNLPA VII+ + Y + F+ L + Q+ GRAGR
Sbjct: 799 SNGHIKVLVCTATLAWGVNLPAHAVIIKGTQIYAAKRGSFVDLGILDVMQIFGRAGRPQF 858
Query: 316 QESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKT 375
+ GE I++ T D L + PI S +L D + +A +++E+
Sbjct: 859 DKFGEGIII--TTHDKLSHYLTLLTQRNPIESQF-LESLADNLNAEIALGTVTNVEEAVK 915
Query: 376 LIKHTLFY 383
I +T Y
Sbjct: 916 WISYTYLY 923
>gi|407041454|gb|EKE40742.1| DEAD/DEAH box helicase, putative [Entamoeba nuttalli P19]
Length = 1804
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 123/480 (25%), Positives = 221/480 (46%), Gaps = 59/480 (12%)
Query: 7 QSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEI 66
+ L+ ++ K + + G + P + K I + T EK + +++ + ++
Sbjct: 1066 EKLSDWKDKLKTLGKNIVELTGDFTPDSAAIAKADIILTTPEKWDGITRLWTKKSYVQKV 1125
Query: 67 GLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSI----QIFAMSATIGNINALSTFIEGI 122
GLI++DE H+L E +RGP++E +V++ + K + +I A++ I N++ + ++I G+
Sbjct: 1126 GLIILDEVHLLGE-ERGPVIEAIVTRTKQINKKLGIQTRICALTTAIANVDDMMSWI-GV 1183
Query: 123 TYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGP-DAVLHLVQGNLM 181
++S HS V + DG T+ Y + T + P + L +
Sbjct: 1184 D--KDSVFNFHSSLRPVP--LIAHIDGFP-TKAYCPRM---ATMNKPCYQAIRLHSPDKP 1235
Query: 182 VLIFCSSK----IACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEEC 237
V+IF SS+ + +L D P +++ E++ E K DG L +EC
Sbjct: 1236 VMIFVSSRRQTRLTAQDLVKFCFNDGNP--QKFLHMPFEEMNEITKSITDGIL----KEC 1289
Query: 238 ILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS--YVGR 295
+LYG+ HHA L +R + E+ + + +QI+ T+TLA GVNLPA VII+ + + G+
Sbjct: 1290 LLYGIGMHHAGLNDHDREITEKLFKSNKIQILITTATLAWGVNLPAHLVIIKGTEYFDGK 1349
Query: 296 --DFISLNMYK--QMVGRAGRTGLQESGESIMLC-KTMQDFLRFSSMMNAGPEPISSHMD 350
F+ + + QM+GRAGR G +++L + +DFLR P P+ S+ +
Sbjct: 1350 KHQFVDMPLTDVLQMMGRAGRPQYDNEGVAVILTYEPKKDFLR---KFLFEPFPLESYFE 1406
Query: 351 PPTLVDLILEVVAANLCSSLEDVK---------TLIKHTLFYQLKSPEDQQTFLETTLSE 401
L E+ N+ + E VK L+K+ +Y E FL + + +
Sbjct: 1407 TVMADQLNAEIAVGNVTNVKEAVKFLTFTYYFRRLLKNPNYYGYDGKEQIGKFLVSKVKD 1466
Query: 402 IVASLLASK--------------GTMLTMNEAGHLSLTSIAKAAVQAGLSHDVCLIIYSD 447
+ L+ +K G + TM + ++ A ++ LSH L I SD
Sbjct: 1467 ALNELVNAKCIEMDENDVETTTNGKLSTMYYISYRTIKMFA-TRMKKDLSHAQILQIISD 1525
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 92/325 (28%), Positives = 152/325 (46%), Gaps = 32/325 (9%)
Query: 16 FKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFH 75
FK +EE V G K + + + T EK L E +++I L+++DE H
Sbjct: 255 FKMRVEE---VTGDTNIPKAVIASTHVIVATPEKFDVLTRKQDAE-FVNDIQLLIVDEVH 310
Query: 76 MLNEPQRGPILECVVSKVLYL----KKSIQIFAMSATIGNINALSTFI----EGITYVEN 127
+L+E RG ++E +V++ L + ++ I++ +SAT+ N + FI E I + +
Sbjct: 311 LLDE-DRGAVIETIVARTLRMVESQQRPIRVVGLSATLPNYQDVGEFIRAKPENIFHFDM 369
Query: 128 S-RPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFC 186
S R S V + G T +A +L Y D +V+ V++F
Sbjct: 370 SYRAVPMSTKFIVLPEDEKENKGHQFTH-HATDLAY-------DEAEIVVKRGKQVIVFV 421
Query: 187 SSKIACSNLALR-LQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYH 245
++ A R ++ + GT EY K ++ GK +++E + G+ H
Sbjct: 422 HTRRETVLTAQRFIRRMKEKGTTEYFTGNKGREFATRIKKLQGK---DIKELLEMGIGVH 478
Query: 246 HADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGR------DFIS 299
+A + +R IE+A+ G+L+++ T+TLA GVNLPA VIIR + V D IS
Sbjct: 479 NAGMFRSDRTFIEDAFRNGSLKVLISTATLAWGVNLPAHTVIIRGTEVFNSDKGCSDKIS 538
Query: 300 LNMYKQMVGRAGRTGLQESGESIML 324
+ QM GRAGR G I++
Sbjct: 539 ILDVLQMFGRAGRPQYDNEGAGIII 563
>gi|76880486|ref|NP_006819.2| activating signal cointegrator 1 complex subunit 3 isoform a [Homo
sapiens]
gi|158518649|sp|Q8N3C0.3|ASCC3_HUMAN RecName: Full=Activating signal cointegrator 1 complex subunit 3;
AltName: Full=ASC-1 complex subunit p200; Short=ASC1p200;
AltName: Full=Helicase, ATP binding 1; AltName:
Full=Trip4 complex subunit p200
Length = 2202
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 107/397 (26%), Positives = 184/397 (46%), Gaps = 51/397 (12%)
Query: 14 EEFKFYLEEYAGVK-----GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGL 68
+++K +EE G K G P + + K + + T EK + S N + ++ +
Sbjct: 1390 DDWKVRIEEKLGKKVIELTGDVTPDMKSIAKADLIVTTPEKWDGVSRSWQNRNYVQQVTI 1449
Query: 69 IVIDEFHMLNEPQRGPILECVVSKVLYL----KKSIQIFAMSATIGNINALSTFIE---- 120
++IDE H+L E +RGP+LE +VS+ ++ +K ++I +S + N L+ ++
Sbjct: 1450 LIIDEIHLLGE-ERGPVLEVIVSRTNFISSHTEKPVRIVGLSTALANARDLADWLNIKQM 1508
Query: 121 GITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNL 180
G+ N RP+ + V Q F G+ A S+ A+
Sbjct: 1509 GLF---NFRPSVRPVPLEVH---IQGFPGQHYCPRMA-----SMNKPAFQAIRSHSPAK- 1556
Query: 181 MVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQ-------EKEDLIEALKEENDGKLSTN 233
VLIF SS+ AL L F T+E KQ E E++I +++ +N
Sbjct: 1557 PVLIFVSSRRQTRLTALELI--AFLATEEDPKQWLNMDEREMENIIATVRD-------SN 1607
Query: 234 LEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS-- 291
L+ + +G+ HHA L +R+ +EE ++ +Q++ TSTLA GVN PA VII+ +
Sbjct: 1608 LKLTLAFGIGMHHAGLHERDRKTVEELFVNCKVQVLIATSTLAWGVNFPAHLVIIKGTEY 1667
Query: 292 YVG--RDFISLNMYK--QMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISS 347
Y G R ++ + QM+GRAGR + G++++L ++ F P P+ S
Sbjct: 1668 YDGKTRRYVDFPITDVLQMMGRAGRPQFDDQGKAVILVHDIKK--DFYKKFLYEPFPVES 1725
Query: 348 HMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQ 384
+ L D + +A +S +D I T F++
Sbjct: 1726 SL-LGVLSDHLNAEIAGGTITSKQDALDYITWTYFFR 1761
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 94/368 (25%), Positives = 167/368 (45%), Gaps = 32/368 (8%)
Query: 33 TKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEI-GLIVIDEFHMLNEPQRGPILECVVS 91
+K ++ + + + T EK + + + + +I L+++DE H+L+E RGP+LE +V+
Sbjct: 571 SKSEILRTQMLVTTPEKWDVVTRKSVGDVALSQIVRLLILDEVHLLHE-DRGPVLESIVA 629
Query: 92 KVLYLKKS----IQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSF 147
+ L +S I+I +SAT+ N ++TF+ Y+ D R
Sbjct: 630 RTLRQVESTQSMIRILGLSATLPNYLDVATFLHVNPYIG---------LFFFDGRFRPVP 680
Query: 148 DGKSLTEIYADNLDYSLTGSGP---DAVLHLVQGNLMVLIFCSSKIACSNLALRLQFDRF 204
G++ I N L + VL V+ V++F ++ A A+ L +R
Sbjct: 681 LGQTFLGIKCANKMQQLNNMDEVCYENVLKQVKAGHQVMVFVHARNATVRTAMSL-IERA 739
Query: 205 PGTKE---YKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAY 261
+ + D + A K+ + + + E G + HHA + +R L+E +
Sbjct: 740 KNCGHIPFFFPTQGHDYVLAEKQVQRSR-NKQVRELFPDGFSIHHAGMLRQDRNLVENLF 798
Query: 262 LAGTLQIICCTSTLAAGVNLPAQRVIIRDS--YVGR--DFISLNMYK--QMVGRAGRTGL 315
G ++++ CT+TLA GVNLPA VII+ + Y + F+ L + Q+ GRAGR
Sbjct: 799 SNGHIKVLVCTATLAWGVNLPAHAVIIKGTQIYAAKRGSFVDLGILDVMQIFGRAGRPQF 858
Query: 316 QESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKT 375
+ GE I++ T D L + PI S +L D + +A +++E+
Sbjct: 859 DKFGEGIII--TTHDKLSHYLTLLTQRNPIESQF-LESLADNLNAEIALGTVTNVEEAVK 915
Query: 376 LIKHTLFY 383
I +T Y
Sbjct: 916 WISYTYLY 923
>gi|296005450|ref|XP_002809047.1| DEAD box helicase, putative [Plasmodium falciparum 3D7]
gi|225631989|emb|CAX64328.1| DEAD box helicase, putative [Plasmodium falciparum 3D7]
Length = 1244
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 102/379 (26%), Positives = 184/379 (48%), Gaps = 39/379 (10%)
Query: 44 ICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKS---- 99
+CT E+ + ++ S+I +N + L ++DE H +N +RG +E +++K+ Y++K+
Sbjct: 398 LCTFEQANTIL-SIIIKNNLKFNYLFILDEIHYINNQKRGFHIESLLTKIKYIQKNFSHI 456
Query: 100 --IQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYA 157
I+++ SATI NI+ L+ +++ Y ++ + +D +++ + K+ E
Sbjct: 457 YNIKVYGFSATISNIDQLAEWLDANVYESKTKLQRIKYLYKIDNSLYKDIN-KNEVERTL 515
Query: 158 DNLDYSLTGSGPDAVLHLVQGNLM----VLIFCSSKIACSNLA--LRLQFDRFPGTKEYK 211
+N + P+ + +L+ + VLIFC SK A + + ++YK
Sbjct: 516 ENCN----TLDPNHLGYLISEEFILKKNVLIFCPSKNKSEQTASFISSTLPYYLNKRDYK 571
Query: 212 K----QEKEDLIEALKEENDGKLST----NLEECILYGVAYHHADLTAGERRLIEEAYLA 263
QEK K ND K T N+E+ I+ G+ YHH+ L E+ LIE ++
Sbjct: 572 INMELQEKR-----FKLLNDLKGLTIKVANVEKMIMNGIFYHHSGLNINEKSLIENSFRN 626
Query: 264 GTLQIICCTSTLAAGVNLPAQRVIIRDSYVGRDFISLNMYKQMVGRAGRTGLQESGESIM 323
L +CCT+TL+ G+N+ +IIR +G+ FI+ + QM GR GR+ ++ +S
Sbjct: 627 NILFCLCCTTTLSVGINMNIHTIIIRSLKLGKSFITKDEITQMAGRCGRSQ-KKLYDSTS 685
Query: 324 LCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFY 383
CK + S M SS + P D + S++E KH L
Sbjct: 686 SCKNFDESTNKSYMTPDRRYTDSSGLPPILDYDYDCDGKVIIFVSNVE------KHYL-E 738
Query: 384 QLKSPEDQQTFLETTLSEI 402
++ E++ + L+TTL+ I
Sbjct: 739 KILYDEEEMSKLKTTLNNI 757
>gi|452843635|gb|EME45570.1| hypothetical protein DOTSEDRAFT_87881 [Dothistroma septosporum
NZE10]
Length = 1647
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 97/370 (26%), Positives = 169/370 (45%), Gaps = 48/370 (12%)
Query: 35 RQLNKKSIYICTIEKGSKLIGSLIQENRIDE-IGLIVIDEFHMLNEPQRGPILECVVSKV 93
R + SI + T EK + ++ + + L +IDE H+L E RG LE VVS++
Sbjct: 481 RHVQHASIIVTTPEKWDSMTRKWKDHQKLMQMVKLFLIDEVHILKE-DRGATLEAVVSRM 539
Query: 94 LYLKKSIQIFAMSATIGNINALSTFI------EGIT-----YVENSRPTKHSEYVTVDKR 142
+ ++ A+SAT+ N ++T++ GI + E RP + ++V
Sbjct: 540 KSIGSDVRFVALSATVPNSQDIATWLGKDSNNPGIPAARERFGEEFRPVRLQKHVC---- 595
Query: 143 VFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLA--LRLQ 200
+ S + L+ LT ++ +++FC ++ +C A L
Sbjct: 596 ---GYASNSNDFAFDKTLNSKLTD-----IIAQWSHRKPLMVFCFTRRSCVETAQLLANW 647
Query: 201 FDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEA 260
+ R + Y + + K+ L+ + GVA+HHA +TA +R IE+A
Sbjct: 648 WARKRPQERYWTGPRSRITLGDKD---------LQHTVPAGVAFHHAGVTAQDRTAIEQA 698
Query: 261 YLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGRDFISLNMYK-----QMVGRAGRTGL 315
YL G + +ICCTSTLA GVNLP VII+++ S+ Y QM+GRAGR
Sbjct: 699 YLQGEINVICCTSTLAVGVNLPCHMVIIKNTVAYSATGSIKEYSDLEVMQMLGRAGRPQF 758
Query: 316 QESGESIMLCKTMQDFLRFSSMMNAGPEPISS--HMDPPTLVDLILEVVAANLCSSLEDV 373
+S ++++ + + ++F M +G E + S H++ L+D + + ++
Sbjct: 759 DDSAVAVIMTRLQR--MQFYETMISGQELLESCLHLN---LIDHLNAEIGLGTVTNASSA 813
Query: 374 KTLIKHTLFY 383
K + T Y
Sbjct: 814 KRWLSGTFLY 823
>gi|410264212|gb|JAA20072.1| activating signal cointegrator 1 complex subunit 3 [Pan troglodytes]
Length = 2202
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 107/397 (26%), Positives = 184/397 (46%), Gaps = 51/397 (12%)
Query: 14 EEFKFYLEEYAGVK-----GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGL 68
+++K +EE G K G P + + K + + T EK + S N + ++ +
Sbjct: 1390 DDWKVRIEEKLGKKVIELTGDVTPDMKSIAKADLIVTTPEKWDGVSRSWQNRNYVQQVTI 1449
Query: 69 IVIDEFHMLNEPQRGPILECVVSKVLYL----KKSIQIFAMSATIGNINALSTFIE---- 120
++IDE H+L E +RGP+LE +VS+ ++ +K ++I +S + N L+ ++
Sbjct: 1450 LIIDEIHLLGE-ERGPVLEVIVSRTNFISSHTEKPVRIVGLSTALANARDLADWLNIKQM 1508
Query: 121 GITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNL 180
G+ N RP+ + V Q F G+ A S+ A+
Sbjct: 1509 GLF---NFRPSVRPVPLEVH---IQGFPGQHYCPRMA-----SMNKPAFQAIRSHSPAK- 1556
Query: 181 MVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQ-------EKEDLIEALKEENDGKLSTN 233
VLIF SS+ AL L F T+E KQ E E++I +++ +N
Sbjct: 1557 PVLIFVSSRRQTRLTALELI--AFLATEEDPKQWLNMDEREMENIIATVRD-------SN 1607
Query: 234 LEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS-- 291
L+ + +G+ HHA L +R+ +EE ++ +Q++ TSTLA GVN PA VII+ +
Sbjct: 1608 LKLTLAFGIGMHHAGLHERDRKTVEELFVNCKVQVLIATSTLAWGVNFPAHLVIIKGTEY 1667
Query: 292 YVG--RDFISLNMYK--QMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISS 347
Y G R ++ + QM+GRAGR + G++++L ++ F P P+ S
Sbjct: 1668 YDGKTRRYVDFPITDVLQMMGRAGRPQFDDQGKAVILVHDIKK--DFYKKFLYEPFPVES 1725
Query: 348 HMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQ 384
+ L D + +A +S +D I T F++
Sbjct: 1726 SL-LGVLSDHLNAEIAGGTITSKQDALDYITWTYFFR 1761
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 94/368 (25%), Positives = 167/368 (45%), Gaps = 32/368 (8%)
Query: 33 TKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEI-GLIVIDEFHMLNEPQRGPILECVVS 91
+K ++ + + + T EK + + + + +I L+++DE H+L+E RGP+LE +V+
Sbjct: 571 SKSEILRTQMLVTTPEKWDVVTRKSVGDVALSQIVKLLILDEVHLLHE-DRGPVLESIVA 629
Query: 92 KVLYLKKS----IQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSF 147
+ L +S I+I +SAT+ N ++TF+ Y+ D R
Sbjct: 630 RTLRQVESTQSMIRILGLSATLPNYFDVATFLHVNPYIG---------LFFFDGRFRPVP 680
Query: 148 DGKSLTEIYADNLDYSLTGSGP---DAVLHLVQGNLMVLIFCSSKIACSNLALRLQFDRF 204
G++ I N L + VL V+ V++F ++ A A+ L +R
Sbjct: 681 LGQTFLGIKCANKMQQLNNMDEVCYENVLKQVKAGHQVMVFVHARNATVRTAMSL-IERA 739
Query: 205 PGTKE---YKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAY 261
+ + D + A K+ + + + E G + HHA + +R L+E +
Sbjct: 740 KNCGHIPFFFPTQGHDYVLAEKQVQRSR-NKQVRELFPDGFSIHHAGMLRQDRNLVENLF 798
Query: 262 LAGTLQIICCTSTLAAGVNLPAQRVIIRDS--YVGR--DFISLNMYK--QMVGRAGRTGL 315
G ++++ CT+TLA GVNLPA VII+ + Y + F+ L + Q+ GRAGR
Sbjct: 799 SNGHIKVLVCTATLAWGVNLPAHAVIIKGTQIYAAKRGSFVDLGILDVMQIFGRAGRPQF 858
Query: 316 QESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKT 375
+ GE I++ T D L + PI S +L D + +A +++E+
Sbjct: 859 DKFGEGIII--TTHDKLSHYLTLLTQRNPIESQF-LESLADNLNAEIALGTVTNVEEAVK 915
Query: 376 LIKHTLFY 383
I +T Y
Sbjct: 916 WISYTYLY 923
>gi|307184505|gb|EFN70894.1| Putative U5 small nuclear ribonucleoprotein 200 kDa helicase
[Camponotus floridanus]
Length = 2140
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 123/480 (25%), Positives = 216/480 (45%), Gaps = 93/480 (19%)
Query: 28 GQYPPTKRQLNKKSIYICTIEK--------GSKLIGSLIQENRIDEIGLIVIDEFHMLNE 79
G + T+ Q+ + +CT EK G K SL++ LI+IDE H+L++
Sbjct: 565 GDHQLTREQIAATQVIVCTPEKWDIITRKGGEKTFTSLVR--------LIIIDEIHLLHD 616
Query: 80 PQRGPILECVVSKVLY----LKKSIQIFAMSATIGNINALSTFIE-----GITYVENS-R 129
+RGP+LE +V++ + ++ +++ +SAT+ N ++ F+ G+ Y +NS R
Sbjct: 617 -ERGPVLEALVARTIRNIETTQEDVRLVGLSATLPNYQDVAAFLRIKPESGLFYFDNSFR 675
Query: 130 PTK-HSEYVTV-DKRVFQSFDGKSLTEI-YADNLDYSLTGSGPDAVLHLVQGNLMVLIFC 186
P +Y+ V +K+ + F + + EI Y ++++ G VLIF
Sbjct: 676 PVALEQQYIGVTEKKALKRF--QVMNEIVYEKTMEHA--------------GRNQVLIFV 719
Query: 187 SSKIACSNLALRL-----------QFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLE 235
S+ A + QF R E +E L+ E + + L+
Sbjct: 720 HSRKETGKTARAIRDMCLEKDTLGQFLR----------EGSASMEVLRTEAEQVKNQELK 769
Query: 236 ECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYV-- 293
+ + YG A HHA +T +R L+E+ + +Q++ T+TLA GVNLPA VII+ + V
Sbjct: 770 DLLPYGFAIHHAGMTRVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQVYN 829
Query: 294 ---GRDFISLNMYK--QMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSH 348
GR ++ L QM+GRAGR GE I++ + + S++N PI S
Sbjct: 830 PEKGR-WVELGALDVLQMLGRAGRPQYDTKGEGILIT-NHSELQYYLSLLNQQL-PIESQ 886
Query: 349 MDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFY--QLKSPE---------DQQTFLET 397
+ + D++ V ++ D T + +T Y L+ P Q + LE
Sbjct: 887 L-ISKMSDMLNAEVVLGTIQNIRDAVTWLGYTYLYIRMLRCPNLYGISHDKLKQDSLLEL 945
Query: 398 TLSEIVASL---LASKGTMLTMNEAGHLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLN 454
++++ S L G + ++G+ T + + A +HD + Y+ LL L+
Sbjct: 946 HRADLIHSAAVGLDRSGLIKYDRKSGNFQATELGRIASHYYCTHD-TMSTYNQLLKRTLS 1004
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 83/340 (24%), Positives = 148/340 (43%), Gaps = 55/340 (16%)
Query: 37 LNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLY- 95
L K I I T +K L Q + I L ++DE ++ + GP+LE S+ Y
Sbjct: 1412 LAKGQIIITTADKWDVLSRRWKQRKNVQNIQLFIVDELQLIG-GEEGPVLEVACSRARYI 1470
Query: 96 ---LKKSIQIFAMSATIGNINALSTFIEG-----ITYVENSRPTKHSEYVTVDKRVFQSF 147
L K +I A+SA++G+ + ++ + + RP
Sbjct: 1471 SSQLDKPTRIIALSASLGDAKDAAQWLGAPAAATFNFHPSVRPVP--------------- 1515
Query: 148 DGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLM-------VLIFCSSKIACSNLALRL- 199
E++ ++ + S A+ V ++ V+IF ++ A+ L
Sbjct: 1516 -----LELHVQGINVTHNASRLAAMAKPVYNAILRHAAHKPVIIFVPTRRQARLTAIDLL 1570
Query: 200 QFDRFPGT-KEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIE 258
F G ++ E+ D+ L D + L+E + GVAY H L+A +RRL+E
Sbjct: 1571 TFTAAEGQPSKFFHAEEADIKPFL----DRMVDKTLKETLSQGVAYLHEGLSADDRRLVE 1626
Query: 259 EAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS--YVGR-----DFISLNMYKQMVGRAG 311
+ +G +Q+ T L G+++ + V++ D+ Y G+ D+ ++ QMV RA
Sbjct: 1627 RLFDSGAIQVAVATRDLCWGLSINSHLVVVMDTQCYNGKTHAYEDYPITDVL-QMVARAN 1685
Query: 312 RTGLQESGESIMLCK-TMQDFLRFSSMMNAGPEPISSHMD 350
R E + ++LC+ + +DF F +N P P+ SH+D
Sbjct: 1686 RPLEDEDAKCVLLCQSSKKDF--FKKFLNE-PLPVESHLD 1722
>gi|21740221|emb|CAD39122.1| hypothetical protein [Homo sapiens]
gi|117645588|emb|CAL38260.1| hypothetical protein [synthetic construct]
gi|152013025|gb|AAI50216.1| Activating signal cointegrator 1 complex subunit 3 [synthetic
construct]
gi|306921237|dbj|BAJ17698.1| activating signal cointegrator 1 complex subunit 3 [synthetic
construct]
Length = 2202
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 108/398 (27%), Positives = 185/398 (46%), Gaps = 53/398 (13%)
Query: 14 EEFKFYLEEYAGVK-----GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGL 68
+++K +EE G K G P + + K + + T EK + S N + ++ +
Sbjct: 1390 DDWKVRIEEKLGKKVIELTGDVTPDMKSIAKADLIVTTPEKWDGVSRSWQNRNYVQQVTI 1449
Query: 69 IVIDEFHMLNEPQRGPILECVVSKVLYL----KKSIQIFAMSATIGNINALSTFIE---- 120
++IDE H+L E +RGP+LE +VS+ ++ +K ++I +S + N L+ ++
Sbjct: 1450 LIIDEIHLLGE-ERGPVLEVIVSRTNFISSHTEKPVRIVGLSTALANARDLADWLNIKQM 1508
Query: 121 GITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNL 180
G+ N RP+ + V Q F G+ A S+ A+
Sbjct: 1509 GLF---NFRPSVRPVPLEVH---IQGFPGQHYCPRMA-----SMNKPAFQAIRSHSPAK- 1556
Query: 181 MVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQ-------EKEDLIEALKEENDGKLSTN 233
VLIF SS+ AL L F T+E KQ E E++I +++ +N
Sbjct: 1557 PVLIFVSSRRQTRLTALELI--AFLATEEDPKQWLNMDEREMENIIATVRD-------SN 1607
Query: 234 LEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS-- 291
L+ + +G+ HHA L +R+ +EE ++ +Q++ TSTLA GVN PA VII+ +
Sbjct: 1608 LKLTLAFGIGMHHAGLHERDRKTVEELFVNCKVQVLIATSTLAWGVNFPAHLVIIKGTEY 1667
Query: 292 YVGR-----DFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPIS 346
Y G+ DF ++ QM+GRAGR + G++++L ++ F P P+
Sbjct: 1668 YDGKTRRYVDFPITDVL-QMMGRAGRPQFDDQGKAVILVHDIKK--DFYKKFLYEPFPVE 1724
Query: 347 SHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQ 384
S + L D + +A +S +D I T F++
Sbjct: 1725 SSL-LGVLSDHLNAEIAGGTITSKQDALDYITWTYFFR 1761
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 94/368 (25%), Positives = 167/368 (45%), Gaps = 32/368 (8%)
Query: 33 TKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEI-GLIVIDEFHMLNEPQRGPILECVVS 91
+K ++ + + + T EK + + + + +I L+++DE H+L+E RGP+LE +V+
Sbjct: 571 SKSEILRTQMLVTTPEKWDVVTRKSVGDVALSQIVRLLILDEVHLLHE-DRGPVLESIVA 629
Query: 92 KVLYLKKS----IQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSF 147
+ L +S I+I +SAT+ N ++TF+ Y+ D R
Sbjct: 630 RTLRQVESTQSMIRILGLSATLPNYLDVATFLHVNPYIG---------LFFFDGRFRPVP 680
Query: 148 DGKSLTEIYADNLDYSLTGSGP---DAVLHLVQGNLMVLIFCSSKIACSNLALRLQFDRF 204
G++ I N L + VL V+ V++F ++ A A+ L +R
Sbjct: 681 LGQTFLGIKCANKMQQLNNMDEVCYENVLKQVKAGHQVMVFVHARNATVRTAMSL-IERA 739
Query: 205 PGTKE---YKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAY 261
+ + D + A K+ + + + E G + HHA + +R L+E +
Sbjct: 740 KNCGHIPFFFSTQGHDYVLAEKQVQRSR-NKQVRELFPDGFSIHHAGMLRQDRNLVENLF 798
Query: 262 LAGTLQIICCTSTLAAGVNLPAQRVIIRDS--YVGR--DFISLNMYK--QMVGRAGRTGL 315
G ++++ CT+TLA GVNLPA VII+ + Y + F+ L + Q+ GRAGR
Sbjct: 799 SNGHIKVLVCTATLAWGVNLPAHAVIIKGTQIYAAKRGSFVDLGILDVMQIFGRAGRPQF 858
Query: 316 QESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKT 375
+ GE I++ T D L + PI S +L D + +A +++E+
Sbjct: 859 DKFGEGIII--TTHDKLSHYLTLLTQRNPIESQF-LESLADNLNAEIALGTVTNVEEAVK 915
Query: 376 LIKHTLFY 383
I +T Y
Sbjct: 916 WISYTYLY 923
>gi|332824658|ref|XP_518652.3| PREDICTED: activating signal cointegrator 1 complex subunit 3 isoform
2 [Pan troglodytes]
Length = 2202
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 107/397 (26%), Positives = 184/397 (46%), Gaps = 51/397 (12%)
Query: 14 EEFKFYLEEYAGVK-----GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGL 68
+++K +EE G K G P + + K + + T EK + S N + ++ +
Sbjct: 1390 DDWKVRIEEKLGKKVIELTGDVTPDMKSIAKADLIVTTPEKWDGVSRSWQNRNYVQQVTI 1449
Query: 69 IVIDEFHMLNEPQRGPILECVVSKVLYL----KKSIQIFAMSATIGNINALSTFIE---- 120
++IDE H+L E +RGP+LE +VS+ ++ +K ++I +S + N L+ ++
Sbjct: 1450 LIIDEIHLLGE-ERGPVLEVIVSRTNFISSHTEKPVRIVGLSTALANARDLADWLNIKQM 1508
Query: 121 GITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNL 180
G+ N RP+ + V Q F G+ A S+ A+
Sbjct: 1509 GLF---NFRPSVRPVPLEVH---IQGFPGQHYCPRMA-----SMNKPAFQAIRSHSPAK- 1556
Query: 181 MVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQ-------EKEDLIEALKEENDGKLSTN 233
VLIF SS+ AL L F T+E KQ E E++I +++ +N
Sbjct: 1557 PVLIFVSSRRQTRLTALELI--AFLATEEDPKQWLNMDEREMENIIATVRD-------SN 1607
Query: 234 LEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS-- 291
L+ + +G+ HHA L +R+ +EE ++ +Q++ TSTLA GVN PA VII+ +
Sbjct: 1608 LKLTLAFGIGMHHAGLHERDRKTVEELFVNCKVQVLIATSTLAWGVNFPAHLVIIKGTEY 1667
Query: 292 YVG--RDFISLNMYK--QMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISS 347
Y G R ++ + QM+GRAGR + G++++L ++ F P P+ S
Sbjct: 1668 YDGKTRRYVDFPITDVLQMMGRAGRPQFDDQGKAVILVHDIKK--DFYKKFLYEPFPVES 1725
Query: 348 HMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQ 384
+ L D + +A +S +D I T F++
Sbjct: 1726 SL-LGVLSDHLNAEIAGGTITSKQDALDYITWTYFFR 1761
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 94/368 (25%), Positives = 167/368 (45%), Gaps = 32/368 (8%)
Query: 33 TKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEI-GLIVIDEFHMLNEPQRGPILECVVS 91
+K ++ + + + T EK + + + + +I L+++DE H+L+E RGP+LE +V+
Sbjct: 571 SKSEILRTQMLVTTPEKWDVVTRKSVGDVALSQIVKLLILDEVHLLHE-DRGPVLESIVA 629
Query: 92 KVLYLKKS----IQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSF 147
+ L +S I+I +SAT+ N ++TF+ Y+ D R
Sbjct: 630 RTLRQVESTQSMIRILGLSATLPNYFDVATFLHVNPYIG---------LFFFDGRFRPVP 680
Query: 148 DGKSLTEIYADNLDYSLTGSGP---DAVLHLVQGNLMVLIFCSSKIACSNLALRLQFDRF 204
G++ I N L + VL V+ V++F ++ A A+ L +R
Sbjct: 681 LGQTFLGIKCANKMQQLNNMDEVCYENVLKQVKAGHQVMVFVHARNATVRTAMSL-IERA 739
Query: 205 PGTKE---YKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAY 261
+ + D + A K+ + + + E G + HHA + +R L+E +
Sbjct: 740 KNCGHIPFFFPTQGHDYVLAEKQVQRSR-NKQVRELFPDGFSIHHAGMLRQDRNLVENLF 798
Query: 262 LAGTLQIICCTSTLAAGVNLPAQRVIIRDS--YVGR--DFISLNMYK--QMVGRAGRTGL 315
G ++++ CT+TLA GVNLPA VII+ + Y + F+ L + Q+ GRAGR
Sbjct: 799 SNGHIKVLVCTATLAWGVNLPAHAVIIKGTQIYAAKRGSFVDLGILDVMQIFGRAGRPQF 858
Query: 316 QESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKT 375
+ GE I++ T D L + PI S +L D + +A +++E+
Sbjct: 859 DKFGEGIII--TTHDKLSHYLTLLTQRNPIESQF-LESLADNLNAEIALGTVTNVEEAVK 915
Query: 376 LIKHTLFY 383
I +T Y
Sbjct: 916 WISYTYLY 923
>gi|119568835|gb|EAW48450.1| activating signal cointegrator 1 complex subunit 3, isoform CRA_b
[Homo sapiens]
Length = 2202
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 107/397 (26%), Positives = 184/397 (46%), Gaps = 51/397 (12%)
Query: 14 EEFKFYLEEYAGVK-----GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGL 68
+++K +EE G K G P + + K + + T EK + S N + ++ +
Sbjct: 1390 DDWKVRIEEKLGKKVIELTGDVTPDMKSIAKADLIVTTPEKWDGVSRSWQNRNYVQQVTI 1449
Query: 69 IVIDEFHMLNEPQRGPILECVVSKVLYL----KKSIQIFAMSATIGNINALSTFIE---- 120
++IDE H+L E +RGP+LE +VS+ ++ +K ++I +S + N L+ ++
Sbjct: 1450 LIIDEIHLLGE-ERGPVLEVIVSRTNFISSHTEKPVRIVGLSTALANARDLADWLNIKQM 1508
Query: 121 GITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNL 180
G+ N RP+ + V Q F G+ A S+ A+
Sbjct: 1509 GLF---NFRPSVRPVPLEVH---IQGFPGQHYCPRMA-----SMNKPAFQAIRSHSPAK- 1556
Query: 181 MVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQ-------EKEDLIEALKEENDGKLSTN 233
VLIF SS+ AL L F T+E KQ E E++I +++ +N
Sbjct: 1557 PVLIFVSSRRQTRLTALELI--AFLATEEDPKQWLNMDEREMENIIATVRD-------SN 1607
Query: 234 LEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS-- 291
L+ + +G+ HHA L +R+ +EE ++ +Q++ TSTLA GVN PA VII+ +
Sbjct: 1608 LKLTLAFGIGMHHAGLHERDRKTVEELFVNCKVQVLIATSTLAWGVNFPAHLVIIKGTEY 1667
Query: 292 YVG--RDFISLNMYK--QMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISS 347
Y G R ++ + QM+GRAGR + G++++L ++ F P P+ S
Sbjct: 1668 YDGKTRRYVDFPITDVLQMMGRAGRPQFDDQGKAVILVHDIKK--DFYKKFLYEPFPVES 1725
Query: 348 HMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQ 384
+ L D + +A +S +D I T F++
Sbjct: 1726 SL-LGVLSDHLNAEIAGGTITSKQDALDYITWTYFFR 1761
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 94/368 (25%), Positives = 167/368 (45%), Gaps = 32/368 (8%)
Query: 33 TKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEI-GLIVIDEFHMLNEPQRGPILECVVS 91
+K ++ + + + T EK + + + + +I L+++DE H+L+E RGP+LE +V+
Sbjct: 571 SKSEILRTQMLVTTPEKWDVVTRKSVGDVALSQIVRLLILDEVHLLHE-DRGPVLESIVA 629
Query: 92 KVLYLKKS----IQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSF 147
+ L +S I+I +SAT+ N ++TF+ Y+ D R
Sbjct: 630 RTLRQVESTQSMIRILGLSATLPNYLDVATFLHVNPYIG---------LFFFDGRFRPVP 680
Query: 148 DGKSLTEIYADNLDYSLTGSGP---DAVLHLVQGNLMVLIFCSSKIACSNLALRLQFDRF 204
G++ I N L + VL V+ V++F ++ A A+ L +R
Sbjct: 681 LGQTFLGIKCANKMQQLNNMDEVCYENVLKQVKAGHQVMVFVHARNATVRTAMSL-IERA 739
Query: 205 PGTKE---YKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAY 261
+ + D + A K+ + + + E G + HHA + +R L+E +
Sbjct: 740 KNCGHIPFFFPTQGHDYVLAEKQVQRSR-NKQVRELFPDGFSIHHAGMLRQDRNLVENLF 798
Query: 262 LAGTLQIICCTSTLAAGVNLPAQRVIIRDS--YVGR--DFISLNMYK--QMVGRAGRTGL 315
G ++++ CT+TLA GVNLPA VII+ + Y + F+ L + Q+ GRAGR
Sbjct: 799 SNGHIKVLVCTATLAWGVNLPAHAVIIKGTQIYAAKRGSFVDLGILDVMQIFGRAGRPQF 858
Query: 316 QESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKT 375
+ GE I++ T D L + PI S +L D + +A +++E+
Sbjct: 859 DKFGEGIII--TTHDKLSHYLTLLTQRNPIESQF-LESLADNLNAEIALGTVTNVEEAVK 915
Query: 376 LIKHTLFY 383
I +T Y
Sbjct: 916 WISYTYLY 923
>gi|397507864|ref|XP_003824401.1| PREDICTED: activating signal cointegrator 1 complex subunit 3 [Pan
paniscus]
Length = 2202
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 108/398 (27%), Positives = 185/398 (46%), Gaps = 53/398 (13%)
Query: 14 EEFKFYLEEYAGVK-----GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGL 68
+++K +EE G K G P + + K + + T EK + S N + ++ +
Sbjct: 1390 DDWKVRIEEKLGKKVIELTGDVTPDMKSIAKADLIVTTPEKWDGVSRSWQNRNYVQQVTI 1449
Query: 69 IVIDEFHMLNEPQRGPILECVVSKVLYL----KKSIQIFAMSATIGNINALSTFIE---- 120
++IDE H+L E +RGP+LE +VS+ ++ +K ++I +S + N L+ ++
Sbjct: 1450 LIIDEIHLLGE-ERGPVLEVIVSRTNFISSHTEKPVRIVGLSTALANARDLADWLNIKQM 1508
Query: 121 GITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNL 180
G+ N RP+ + V Q F G+ A S+ A+
Sbjct: 1509 GLF---NFRPSVRPVPLEVH---IQGFPGQHYCPRMA-----SMNKPAFQAIRSHSPAK- 1556
Query: 181 MVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQ-------EKEDLIEALKEENDGKLSTN 233
VLIF SS+ AL L F T+E KQ E E++I +++ +N
Sbjct: 1557 PVLIFVSSRRQTRLTALELI--AFLATEEDPKQWLNMDEREMENIIATVRD-------SN 1607
Query: 234 LEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS-- 291
L+ + +G+ HHA L +R+ +EE ++ +Q++ TSTLA GVN PA VII+ +
Sbjct: 1608 LKLTLAFGIGMHHAGLHERDRKTVEELFVNCKVQVLIATSTLAWGVNFPAHLVIIKGTEY 1667
Query: 292 YVGR-----DFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPIS 346
Y G+ DF ++ QM+GRAGR + G++++L ++ F P P+
Sbjct: 1668 YDGKTRRYVDFPITDVL-QMMGRAGRPQFDDQGKAVILVHDIKK--DFYKKFLYEPFPVE 1724
Query: 347 SHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQ 384
S + L D + +A +S +D I T F++
Sbjct: 1725 SSL-LGVLSDHLNAEIAGGTITSKQDALDYITWTYFFR 1761
Score = 92.4 bits (228), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 94/368 (25%), Positives = 167/368 (45%), Gaps = 32/368 (8%)
Query: 33 TKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEI-GLIVIDEFHMLNEPQRGPILECVVS 91
+K ++ + + + T EK + + + + +I L+++DE H+L+E RGP+LE +V+
Sbjct: 571 SKSEILRTQMLVTTPEKWDVVTRKSVGDVALSQIVKLLILDEVHLLHE-DRGPVLESIVA 629
Query: 92 KVLYLKKS----IQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSF 147
+ L +S I+I +SAT+ N ++TF+ Y+ D R
Sbjct: 630 RTLRQVESTQSMIRILGLSATLPNYLDVATFLHVNPYIG---------LFFFDGRFRPVP 680
Query: 148 DGKSLTEIYADNLDYSLTGSGP---DAVLHLVQGNLMVLIFCSSKIACSNLALRLQFDRF 204
G++ I N L + VL V+ V++F ++ A A+ L +R
Sbjct: 681 LGQTFLGIKCANKMQQLNNMDEVCYENVLKQVKAGHQVMVFVHARNATVRTAMSL-IERA 739
Query: 205 PGTKE---YKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAY 261
+ + D + A K+ + + + E G + HHA + +R L+E +
Sbjct: 740 KNCGHIPFFFPTQGHDYVLAEKQVQRSR-NKQVRELFPDGFSIHHAGMLRQDRNLVENLF 798
Query: 262 LAGTLQIICCTSTLAAGVNLPAQRVIIRDS--YVGR--DFISLNMYK--QMVGRAGRTGL 315
G ++++ CT+TLA GVNLPA VII+ + Y + F+ L + Q+ GRAGR
Sbjct: 799 SNGHIKVLVCTATLAWGVNLPAHAVIIKGTQIYAAKRGSFVDLGILDVMQIFGRAGRPQF 858
Query: 316 QESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKT 375
+ GE I++ T D L + PI S +L D + +A +++E+
Sbjct: 859 DKFGEGIII--TTHDKLSHYLTLLTQRNPIESQF-LESLADNLNAEIALGTVTNVEEAVK 915
Query: 376 LIKHTLFY 383
I +T Y
Sbjct: 916 WISYTYLY 923
>gi|410342101|gb|JAA39997.1| activating signal cointegrator 1 complex subunit 3 [Pan troglodytes]
Length = 2202
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 108/398 (27%), Positives = 185/398 (46%), Gaps = 53/398 (13%)
Query: 14 EEFKFYLEEYAGVK-----GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGL 68
+++K +EE G K G P + + K + + T EK + S N + ++ +
Sbjct: 1390 DDWKVRIEEKLGKKVIELTGDVTPDMKSIAKADLIVTTPEKWDGVSRSWQNRNYVQQVTI 1449
Query: 69 IVIDEFHMLNEPQRGPILECVVSKVLYL----KKSIQIFAMSATIGNINALSTFIE---- 120
++IDE H+L E +RGP+LE +VS+ ++ +K ++I +S + N L+ ++
Sbjct: 1450 LIIDEIHLLGE-ERGPVLEVIVSRTNFISSHTEKPVRIVGLSTALANARDLADWLNIKQM 1508
Query: 121 GITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNL 180
G+ N RP+ + V Q F G+ A S+ A+
Sbjct: 1509 GLF---NFRPSVRPVPLEVH---IQGFPGQHYCPRMA-----SMNKPAFQAIRSHSPAK- 1556
Query: 181 MVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQ-------EKEDLIEALKEENDGKLSTN 233
VLIF SS+ AL L F T+E KQ E E++I +++ +N
Sbjct: 1557 PVLIFVSSRRQTRLTALELI--AFLATEEDPKQWLNMDEREMENIIATVRD-------SN 1607
Query: 234 LEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS-- 291
L+ + +G+ HHA L +R+ +EE ++ +Q++ TSTLA GVN PA VII+ +
Sbjct: 1608 LKLTLAFGIGMHHAGLHERDRKTVEELFVNCKVQVLIATSTLAWGVNFPAHLVIIKGTEY 1667
Query: 292 YVGR-----DFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPIS 346
Y G+ DF ++ QM+GRAGR + G++++L ++ F P P+
Sbjct: 1668 YDGKTRRYVDFPITDVL-QMMGRAGRPQFDDQGKAVILVHDIKK--DFYKKFLYEPFPVE 1724
Query: 347 SHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQ 384
S + L D + +A +S +D I T F++
Sbjct: 1725 SSL-LGVLSDHLNAEIAGGTITSKQDALDYITWTYFFR 1761
Score = 92.4 bits (228), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 94/368 (25%), Positives = 167/368 (45%), Gaps = 32/368 (8%)
Query: 33 TKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEI-GLIVIDEFHMLNEPQRGPILECVVS 91
+K ++ + + + T EK + + + + +I L+++DE H+L+E RGP+LE +V+
Sbjct: 571 SKSEILRTQMLVTTPEKWDVVTRKSVGDVALSQIVKLLILDEVHLLHE-DRGPVLESIVA 629
Query: 92 KVLYLKKS----IQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSF 147
+ L +S I+I +SAT+ N ++TF+ Y+ D R
Sbjct: 630 RTLRQVESTQSMIRILGLSATLPNYLDVATFLHVNPYIG---------LFFFDGRFRPVP 680
Query: 148 DGKSLTEIYADNLDYSLTGSGP---DAVLHLVQGNLMVLIFCSSKIACSNLALRLQFDRF 204
G++ I N L + VL V+ V++F ++ A A+ L +R
Sbjct: 681 LGQTFLGIKCANKMQQLNNMDEVCYENVLKQVKAGHQVMVFVHARNATVRTAMSL-IERA 739
Query: 205 PGTKE---YKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAY 261
+ + D + A K+ + + + E G + HHA + +R L+E +
Sbjct: 740 KNCGHIPFFFPTQGHDYVLAEKQVQRSR-NKQVRELFPDGFSIHHAGMLRQDRNLVENLF 798
Query: 262 LAGTLQIICCTSTLAAGVNLPAQRVIIRDS--YVGR--DFISLNMYK--QMVGRAGRTGL 315
G ++++ CT+TLA GVNLPA VII+ + Y + F+ L + Q+ GRAGR
Sbjct: 799 SNGHIKVLVCTATLAWGVNLPAHAVIIKGTQIYAAKRGSFVDLGILDVMQIFGRAGRPQF 858
Query: 316 QESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKT 375
+ GE I++ T D L + PI S +L D + +A +++E+
Sbjct: 859 DKFGEGIII--TTHDKLSHYLTLLTQRNPIESQF-LESLADNLNAEIALGTVTNVEEAVK 915
Query: 376 LIKHTLFY 383
I +T Y
Sbjct: 916 WISYTYLY 923
>gi|395851454|ref|XP_003798270.1| PREDICTED: LOW QUALITY PROTEIN: activating signal cointegrator 1
complex subunit 3 [Otolemur garnettii]
Length = 2226
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 107/397 (26%), Positives = 184/397 (46%), Gaps = 51/397 (12%)
Query: 14 EEFKFYLEEYAGVK-----GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGL 68
+++K +EE G K G P + + K + + T EK + S N + ++ +
Sbjct: 1375 DDWKVRIEEKLGKKVIELTGDVTPDMKSIAKADLIVTTPEKWDGVSRSWQNRNYVQQVTI 1434
Query: 69 IVIDEFHMLNEPQRGPILECVVSKVLYL----KKSIQIFAMSATIGNINALSTFIE---- 120
++IDE H+L E +RGP+LE +VS+ ++ +K ++I +S + N L+ ++
Sbjct: 1435 LIIDEIHLLGE-ERGPVLEVIVSRTNFISSHTEKPVRIVGLSTALANARDLADWLNIKQM 1493
Query: 121 GITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNL 180
G+ N RP+ + V Q F G+ A S+ A+
Sbjct: 1494 GLF---NFRPSVRPVPLEVH---IQGFPGQHYCPRMA-----SMNKPAFQAIRSHSPAK- 1541
Query: 181 MVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQ-------EKEDLIEALKEENDGKLSTN 233
VLIF SS+ AL L F T+E KQ E E++I +++ +N
Sbjct: 1542 PVLIFVSSRRQTRLTALELI--AFLATEEDPKQWLNMDEREMENIIATVRD-------SN 1592
Query: 234 LEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS-- 291
L+ + +G+ HHA L +R+ +EE ++ +Q++ TSTLA GVN PA VII+ +
Sbjct: 1593 LKLTLAFGIGMHHAGLHERDRKTVEELFVNCKVQVLIATSTLAWGVNFPAHLVIIKGTEY 1652
Query: 292 YVG--RDFISLNMYK--QMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISS 347
Y G R ++ + QM+GRAGR + G++++L ++ F P P+ S
Sbjct: 1653 YDGKTRRYVDFPITDVLQMMGRAGRPQFDDQGKAVILVHDIKK--DFYKKFLYEPFPVES 1710
Query: 348 HMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQ 384
+ L D + +A +S +D I T F++
Sbjct: 1711 SL-LGVLSDHLNAEIAGGTITSKQDALDYITWTYFFR 1746
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 102/380 (26%), Positives = 177/380 (46%), Gaps = 56/380 (14%)
Query: 33 TKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEI-GLIVIDEFHMLNEPQRGPILECVVS 91
+K ++ + + + T EK + + + + +I L+++DE H+L+E RGP+LE +V+
Sbjct: 569 SKSEILRTQMLVTTPEKWDVVTRKSVGDVALSQIVRLLILDEVHLLHE-DRGPVLESIVA 627
Query: 92 KVLYLKKS----IQIFAMSATIGNINALSTFIE-----GITYVENS-RPTKHSEYVTVDK 141
+ L +S I+I +SAT+ N ++TF+ G+ Y + RP
Sbjct: 628 RTLRQVESTQSMIRILGLSATLPNYLDVATFLHVNPYIGLFYFDGRFRPVP--------- 678
Query: 142 RVFQSFDG-KSLTEIYA-DNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRL 199
+ Q+F G KS ++ +N+D D+VL V+ V++F ++ A A+ L
Sbjct: 679 -LGQTFLGIKSANKMQQLNNMDEVCY----DSVLKQVKAGHQVMVFVHARNATVRTAMSL 733
Query: 200 --------QFDRFPGTK--EYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADL 249
Q F T+ +Y EK+ + N + E G + HHA +
Sbjct: 734 IERAKNCGQISWFLPTQGPDYGHAEKQ----VQRSRN-----KQVRELFPDGFSIHHAGM 784
Query: 250 TAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS--YVGR--DFISLNMYK- 304
+R L+E + G ++++ CT+TLA GVNLPA VII+ + Y + F+ L +
Sbjct: 785 LRQDRNLVENLFSNGHIKVLVCTATLAWGVNLPAHAVIIKGTQIYAAKRGSFVDLGILDV 844
Query: 305 -QMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVA 363
Q+ GRAGR + GE I++ T D L + PI S +L D + +A
Sbjct: 845 MQIFGRAGRPQFDKFGEGIII--TTHDKLSHYLTLLTQQNPIESQF-LESLADNLNAEIA 901
Query: 364 ANLCSSLEDVKTLIKHTLFY 383
+++E+ I +T Y
Sbjct: 902 LGTVTNVEEAVKWISYTYLY 921
>gi|410218606|gb|JAA06522.1| activating signal cointegrator 1 complex subunit 3 [Pan troglodytes]
gi|410304800|gb|JAA31000.1| activating signal cointegrator 1 complex subunit 3 [Pan troglodytes]
Length = 2202
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 107/397 (26%), Positives = 184/397 (46%), Gaps = 51/397 (12%)
Query: 14 EEFKFYLEEYAGVK-----GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGL 68
+++K +EE G K G P + + K + + T EK + S N + ++ +
Sbjct: 1390 DDWKVRIEEKLGKKVIELTGDVTPDMKSIAKADLIVTTPEKWDGVSRSWQNRNYVQQVTI 1449
Query: 69 IVIDEFHMLNEPQRGPILECVVSKVLYL----KKSIQIFAMSATIGNINALSTFIE---- 120
++IDE H+L E +RGP+LE +VS+ ++ +K ++I +S + N L+ ++
Sbjct: 1450 LIIDEIHLLGE-ERGPVLEVIVSRTNFISSHTEKPVRIVGLSTALANARDLADWLNIKQM 1508
Query: 121 GITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNL 180
G+ N RP+ + V Q F G+ A S+ A+
Sbjct: 1509 GLF---NFRPSVRPVPLEVH---IQGFPGQHYCPRMA-----SMNKPAFQAIRSHSPAK- 1556
Query: 181 MVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQ-------EKEDLIEALKEENDGKLSTN 233
VLIF SS+ AL L F T+E KQ E E++I +++ +N
Sbjct: 1557 PVLIFVSSRRQTRLTALELI--AFLATEEDPKQWLNMDEREMENIIATVRD-------SN 1607
Query: 234 LEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS-- 291
L+ + +G+ HHA L +R+ +EE ++ +Q++ TSTLA GVN PA VII+ +
Sbjct: 1608 LKLTLAFGIGMHHAGLHERDRKTVEELFVNCKVQVLIATSTLAWGVNFPAHLVIIKGTEY 1667
Query: 292 YVG--RDFISLNMYK--QMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISS 347
Y G R ++ + QM+GRAGR + G++++L ++ F P P+ S
Sbjct: 1668 YDGKTRRYVDFPITDVLQMMGRAGRPQFDDQGKAVILVHDIKK--DFYKKFLYEPFPVES 1725
Query: 348 HMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQ 384
+ L D + +A +S +D I T F++
Sbjct: 1726 SL-LGVLSDHLNAEIAGGTITSKQDALDYITWTYFFR 1761
Score = 92.4 bits (228), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 94/368 (25%), Positives = 167/368 (45%), Gaps = 32/368 (8%)
Query: 33 TKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEI-GLIVIDEFHMLNEPQRGPILECVVS 91
+K ++ + + + T EK + + + + +I L+++DE H+L+E RGP+LE +V+
Sbjct: 571 SKSEILRTQMLVTTPEKWDVVTRKSVGDVALSQIVKLLILDEVHLLHE-DRGPVLESIVA 629
Query: 92 KVLYLKKS----IQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSF 147
+ L +S I+I +SAT+ N ++TF+ Y+ D R
Sbjct: 630 RTLRQVESTQSMIRILGLSATLPNYLDVATFLHVNPYIG---------LFFFDGRFRPVP 680
Query: 148 DGKSLTEIYADNLDYSLTGSGP---DAVLHLVQGNLMVLIFCSSKIACSNLALRLQFDRF 204
G++ I N L + VL V+ V++F ++ A A+ L +R
Sbjct: 681 LGQTFLGIKCANKMQQLNNMDEVCYENVLKQVKAGHQVMVFVHARNATVRTAMSL-IERA 739
Query: 205 PGTKE---YKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAY 261
+ + D + A K+ + + + E G + HHA + +R L+E +
Sbjct: 740 KNCGHIPFFFPTQGHDYVLAEKQVQRSR-NKQVRELFPDGFSIHHAGMLRQDRNLVENLF 798
Query: 262 LAGTLQIICCTSTLAAGVNLPAQRVIIRDS--YVGR--DFISLNMYK--QMVGRAGRTGL 315
G ++++ CT+TLA GVNLPA VII+ + Y + F+ L + Q+ GRAGR
Sbjct: 799 SNGHIKVLVCTATLAWGVNLPAHAVIIKGTQIYAAKRGSFVDLGILDVMQIFGRAGRPQF 858
Query: 316 QESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKT 375
+ GE I++ T D L + PI S +L D + +A +++E+
Sbjct: 859 DKFGEGIII--TTHDKLSHYLTLLTQRNPIESQF-LESLADNLNAEIALGTVTNVEEAVK 915
Query: 376 LIKHTLFY 383
I +T Y
Sbjct: 916 WISYTYLY 923
>gi|170055165|ref|XP_001863460.1| pre-mRNA-splicing helicase BRR2 [Culex quinquefasciatus]
gi|167875204|gb|EDS38587.1| pre-mRNA-splicing helicase BRR2 [Culex quinquefasciatus]
Length = 2144
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 114/463 (24%), Positives = 219/463 (47%), Gaps = 59/463 (12%)
Query: 28 GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILE 87
G + ++ Q+ + +CT EK + ++ + L++IDE H+L++ +RGP+LE
Sbjct: 572 GDHQLSREQIAATQVIVCTPEKWDIITRKGGEKTYTQLVRLVIIDEIHLLHD-ERGPVLE 630
Query: 88 CVVSKVLY----LKKSIQIFAMSATIGNINALSTFIE-----GITYVENS-RPTK-HSEY 136
+V++ + ++ +++ +SAT+ N ++TF+ G+ Y +NS RP +Y
Sbjct: 631 SLVARTIRNIETTQEDVRLVGLSATLPNYQDVATFLRVRPETGLFYFDNSYRPVALEQQY 690
Query: 137 VTV-DKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNL 195
+ V +K+ + F + + +I + + + H + ++V + + +
Sbjct: 691 IGVTEKKALKRF--QVMNDIVYEKV-----------MEHAGKNQVLVFVHSRKETGKTAR 737
Query: 196 ALR---LQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAG 252
A+R L+ D +E +E L+ E + + L++ + YG A HHA +T
Sbjct: 738 AIRDMCLEKDTLGSFL----REGSASMEVLRSEAEQVKNGELKDLLPYGFAIHHAGMTRV 793
Query: 253 ERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYV-----GRDFISLNMYK--Q 305
+R L+E+ + +Q++ T+TLA GVNLPA VII+ + V GR ++ L Q
Sbjct: 794 DRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQVYNPEKGR-WVELGALDVLQ 852
Query: 306 MVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAAN 365
M+GRAGR GE I++ T L+F + PI S + + D++ +
Sbjct: 853 MLGRAGRPQYDTKGEGILI--TNHSELQFYLSLLNQQLPIESQL-ISKMPDMLNAEIVLG 909
Query: 366 LCSSLEDVKTLIKHTLFY--QLKSPE---------DQQTFLETTLSEIV--ASLLASKGT 412
+++D T + +T Y L+ P + LE + +V A+L K
Sbjct: 910 TIQNVKDAVTWLGYTYLYIRMLRQPTLYGVSYDAIKEDPLLEHFRANLVHTAALHLEKSG 969
Query: 413 MLTMN-EAGHLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLN 454
++ + ++GH +T I + A +HD ++ Y+ LL L+
Sbjct: 970 LIKYDRKSGHFQVTEIGRIASHYYCTHD-TMLTYNQLLKPTLS 1011
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 148/337 (43%), Gaps = 53/337 (15%)
Query: 39 KKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYL-- 96
K I + T +K L Q + I L ++DE ++ + GP+LE V S++ Y+
Sbjct: 1422 KGQIIVTTADKWDILSRRWKQRKNVQNIQLFIVDELQLIG-GEEGPVLEVVCSRMRYISS 1480
Query: 97 --KKSIQIFAMSATIGNINALSTFI-----EGITYVENSRPTKHSEYVTVDKRVFQSFDG 149
+K I+I A+SA++ + ++ ++ + + RP +V Q F+
Sbjct: 1481 QIEKQIRIIALSASLSDARDVAQWLGCNANATFNFHPSVRPIPLELHV-------QGFN- 1532
Query: 150 KSLTEIYADNLDYSLTGSGP--DAVLHLVQGNLMVLIFCSSKIA-------CSNLALRLQ 200
N S P +AV +++ S K+A + A Q
Sbjct: 1533 ------ITHNASRIAAMSKPVYNAVTKFSPHKPVIVFVSSRKLARLTAIDILTYCAAEAQ 1586
Query: 201 FDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEA 260
+RF E+ED+ L D L+E + GVAY H LTA + R++E+
Sbjct: 1587 PNRF------FHAEEEDIKPFLDRMTD----KTLKETLSQGVAYIHEGLTASDHRIVEQL 1636
Query: 261 YLAGTLQIICCTSTLAAGVNLPAQRVIIRDS--YVGR----DFISLNMYKQMVGRAGRTG 314
+ +G +QI T L G+N+ A V+I D+ Y G+ D + QMVGRA R
Sbjct: 1637 FDSGAVQIAVVTRDLCWGLNISAYLVVIMDTQFYNGKSHSYDDYPVTDVMQMVGRANRPL 1696
Query: 315 LQESGESIMLCK-TMQDFLRFSSMMNAGPEPISSHMD 350
+ + +++C+ + +DF F +N P+ SH+D
Sbjct: 1697 EDDDAKCVLMCQSSKKDF--FKKFLNESL-PVESHLD 1730
>gi|451850021|gb|EMD63324.1| hypothetical protein COCSADRAFT_38184 [Cochliobolus sativus ND90Pr]
Length = 2211
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 110/410 (26%), Positives = 202/410 (49%), Gaps = 43/410 (10%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V E+ + K E + + E G + TK+Q+ + I + T EK +
Sbjct: 601 LVAEQVGNFGKRLEPYGIKVSELTGDRQL---TKQQIAETQIIVTTPEKYDVITRKATDT 657
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKS----IQIFAMSATIGNINALS 116
+ I+ + LI IDE H+L++ RGP++E +VS+ L + ++I +SAT+ N ++
Sbjct: 658 SYINLVRLICIDEIHLLHD-DRGPVIESIVSRTLRHSEQTGDHVRIVGLSATLPNYRDVA 716
Query: 117 TFI-----EGITYVENS-RPTK-HSEYVTV-DKRVFQSFDGKSLTEI-YADNLDYSLTGS 167
+F+ +G+ + + + RP E++ V DK+ + K++ ++ Y L+
Sbjct: 717 SFLRVDPDKGLFHFDGTFRPCPLKQEFIGVTDKKAIKQL--KTMNDVCYTKVLE------ 768
Query: 168 GPDAVLHLVQGNLMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLI--EALKEE 225
+ + +LIF S+ + A ++ D+ + K + D E L+EE
Sbjct: 769 ------QVGEHRNQMLIFVHSRKETAKTAKYIR-DKALEEETIGKILRSDAASREILREE 821
Query: 226 NDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQR 285
++ + +L++ + YG HHA ++ +R +E+ + G++Q++ CT+TLA GVNLPA
Sbjct: 822 SESIQNADLKDVMPYGFGIHHAGMSRADRTSVEDLFADGSIQVLVCTATLAWGVNLPAHT 881
Query: 286 VIIRDSYV----GRDFISLNMYK--QMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMN 339
VII+ + + ++ L+ QM+GRAGR GE I++ T + + S++N
Sbjct: 882 VIIKGTQIYSPEKGSWVELSPQDVLQMLGRAGRPQYDTYGEGIIIT-TQSEIQYYLSLLN 940
Query: 340 AGPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQ-LKSP 388
PI S + +L E+V N+ S E V L LF + L+SP
Sbjct: 941 QQ-LPIESQLISKLADNLNAEIVLGNVRSRDEAVDWLGYTYLFVRMLRSP 989
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 82/394 (20%), Positives = 166/394 (42%), Gaps = 43/394 (10%)
Query: 15 EFKFYLEEYAGVKGQYPPTK---------RQLNKKSIYICTIEKGSKLIGSLIQENRIDE 65
++K + E +G+ G K R L K + + T + L + +
Sbjct: 1446 QYKNWNERLSGLSGGKDIVKLTGETTADLRLLEKGDLILATPSQWDSLSRQWQRRKNVQS 1505
Query: 66 IGLIVIDEFHMLNEPQRGPILECVVSKV----LYLKKSIQIFAMSATIGNINALSTFIEG 121
+ L++ DE HML G + E VVS++ L+ ++I +S ++ N + +I
Sbjct: 1506 VSLLITDELHMLGG-SNGHVYEIVVSRMQAMATQLESKLRIVGLSVSLSNARDIGEWIGA 1564
Query: 122 ITY-VENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNL 180
+ + N P + + + + F SL A ++T PD
Sbjct: 1565 NKHTIYNFSPAIRAVPLELKIQSFTIPHFPSLMMAMARPTYSAITQMSPDKP-------- 1616
Query: 181 MVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEA---LKEENDGKLSTNLEEC 237
++F ++ N A+ L F+ + + DL E L++ N+ L+T+L
Sbjct: 1617 -AMVFVPNRKQARNSAVDL-FNACIADDDEDRFLNVDLSEIQPILEKINEQALATSLS-- 1672
Query: 238 ILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS--YVGR 295
+G+ Y H L + ++R ++ + G +Q++ + ++ A V+++ + Y GR
Sbjct: 1673 --HGIGYFHEALNSFDKRAVQHLFKVGAIQVMIVSRDSCWEIDSSAHLVVVQGTQFYEGR 1730
Query: 296 DF----ISLNMYKQMVGRAGRTGLQESGESI-MLCKTMQDFLRFSSMMNAGPEPISSHMD 350
+ ++ QM G+AGR GL +S + + ML +++ + +N PI S++
Sbjct: 1731 EHRYVDYPISDILQMFGKAGRVGLDKSAKGVLMLPAVKREY--YKKFLNEA-LPIESYLH 1787
Query: 351 PPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQ 384
L D + ++A S ++ +T FY+
Sbjct: 1788 -DYLHDAFVAEISAKTIESTQEAVDWSTYTYFYR 1820
>gi|12061185|gb|AAG45474.1| ASC-1 complex subunit P200 [Homo sapiens]
Length = 1917
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 107/397 (26%), Positives = 184/397 (46%), Gaps = 51/397 (12%)
Query: 14 EEFKFYLEEYAGVK-----GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGL 68
+++K +EE G K G P + + K + + T EK + S N + ++ +
Sbjct: 1114 DDWKVRIEEKLGKKVIELTGDVTPDMKSIAKADLIVTTPEKWDGVSRSWQNRNYVQQVTI 1173
Query: 69 IVIDEFHMLNEPQRGPILECVVSKVLYL----KKSIQIFAMSATIGNINALSTFIE---- 120
++IDE H+L E +RGP+LE +VS+ ++ +K ++I +S + N L+ ++
Sbjct: 1174 LIIDEIHLLGE-ERGPVLEVIVSRTNFISSHTEKPVRIVGLSTALANARDLADWLNIKQM 1232
Query: 121 GITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNL 180
G+ N RP+ + V Q F G+ A S+ A+
Sbjct: 1233 GLF---NFRPSVRPVPLEVH---IQGFPGQHYCPRMA-----SMNKPAFQAIRSHSPAK- 1280
Query: 181 MVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQ-------EKEDLIEALKEENDGKLSTN 233
VLIF SS+ AL L F T+E KQ E E++I +++ +N
Sbjct: 1281 PVLIFVSSRRQTRLTALELI--AFLATEEDPKQWLNMDEREMENIIATVRD-------SN 1331
Query: 234 LEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS-- 291
L+ + +G+ HHA L +R+ +EE ++ +Q++ TSTLA GVN PA VII+ +
Sbjct: 1332 LKLTLAFGIGMHHAGLHERDRKTVEELFVNCKVQVLIATSTLAWGVNFPAHLVIIKGTEY 1391
Query: 292 YVG--RDFISLNMYK--QMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISS 347
Y G R ++ + QM+GRAGR + G++++L ++ F P P+ S
Sbjct: 1392 YDGKTRRYVDFPITDVLQMMGRAGRPQFDDQGKAVILVHDIKK--DFYKKFLYEPFPVES 1449
Query: 348 HMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQ 384
+ L D + +A +S +D I T F++
Sbjct: 1450 SL-LGVLSDHLNAEIAGGTITSKQDALDYITWTYFFR 1485
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 94/368 (25%), Positives = 167/368 (45%), Gaps = 32/368 (8%)
Query: 33 TKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEI-GLIVIDEFHMLNEPQRGPILECVVS 91
+K ++ + + + T EK + + + + +I L+++DE H+L+E RGP+LE +V+
Sbjct: 295 SKSEILRTQMLVTTPEKWDVVTRKSVGDVALSQIVRLLILDEVHLLHE-DRGPVLESIVA 353
Query: 92 KVLYLKKS----IQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSF 147
+ L +S I+I +SAT+ N ++TF+ Y+ D R
Sbjct: 354 RTLRQVESTQSMIRILGLSATLPNYLDVATFLHVNPYIG---------LFFFDGRFRPVP 404
Query: 148 DGKSLTEIYADNLDYSLTGSGP---DAVLHLVQGNLMVLIFCSSKIACSNLALRLQFDRF 204
G++ I N L + VL V+ V++F ++ A A+ L +R
Sbjct: 405 LGQTFLGIKCANKMQQLNNMDEVCYENVLKQVKAGHQVMVFVHARNATVRTAMSL-IERA 463
Query: 205 PGTKE---YKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAY 261
+ + D + A K+ + + + E G + HHA + +R L+E +
Sbjct: 464 KNCGHIPFFFPTQGHDYVLAEKQVQRSR-NKQVRELFPDGFSIHHAGMLRQDRNLVENLF 522
Query: 262 LAGTLQIICCTSTLAAGVNLPAQRVIIRDS--YVGR--DFISLNMYK--QMVGRAGRTGL 315
G ++++ CT+TLA GVNLPA VII+ + Y + F+ L + Q+ GRAGR
Sbjct: 523 SNGHIKVLVCTATLAWGVNLPAHAVIIKGTQIYAAKRGSFVDLGILDVMQIFGRAGRPQF 582
Query: 316 QESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKT 375
+ GE I++ T D L + PI S +L D + +A +++E+
Sbjct: 583 DKFGEGIII--TTHDKLSHYLTLLTQRNPIESQF-LESLADNLNAEIALGTVTNVEEAVK 639
Query: 376 LIKHTLFY 383
I +T Y
Sbjct: 640 WISYTYLY 647
>gi|392595529|gb|EIW84852.1| DEAD-domain-containing protein [Coniophora puteana RWD-64-598 SS2]
Length = 1239
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 92/301 (30%), Positives = 150/301 (49%), Gaps = 32/301 (10%)
Query: 42 IYICTIEKGSKLIGSLIQENRI-DEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSI 100
+ + T EK L + RI +I L ++DE H+LNE RG LE +V+++ S+
Sbjct: 225 VIVTTAEKWDSLTRNWGDHARILSQIQLFLVDEVHILNE-SRGSTLEVIVARMKKRGSSV 283
Query: 101 QIFAMSATIGNINALSTFIEGITYVENSRPTK----HSEY--VTVDKRVFQSFDGKSLTE 154
+ +SAT+ NI ++++I + ++RP + EY + + V+ K L +
Sbjct: 284 RFILVSATVPNIQDVASWIG--SSASSARPAQVFQFGDEYRPCKLSRHVYGIGRPKGLND 341
Query: 155 I-YADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRLQFDRFPGTKEYKK- 212
YA LD L ++ N +L+FCS++ A L KEY++
Sbjct: 342 FAYAHTLDGRLF-----EIMQRHSVNKPILVFCSTRKGTVTTAKVL-------AKEYEQA 389
Query: 213 -QEKEDLIEALKEENDGKL-STNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIIC 270
+ K L + D +L G+A+HHA L +R+L+EE YL TL+++
Sbjct: 390 MKNKHQLPWNPPPKMDFHFKDKDLAALAAVGIAFHHAGLNLDDRKLVEELYLKKTLRVLT 449
Query: 271 CTSTLAAGVNLPAQRVIIRDSYV-----GRDFISLNMYKQMVGRAGRTGLQESGESIMLC 325
TSTLA GVNLPA V+I+ V +++ L+M QM+GRAGR + G +I++C
Sbjct: 450 ATSTLAVGVNLPAHTVVIKGVKVFQNGQTKEYSDLDMM-QMMGRAGRPQFDKDGVAIIMC 508
Query: 326 K 326
+
Sbjct: 509 E 509
>gi|452001843|gb|EMD94302.1| hypothetical protein COCHEDRAFT_1130811 [Cochliobolus
heterostrophus C5]
Length = 2184
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 110/410 (26%), Positives = 202/410 (49%), Gaps = 43/410 (10%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V E+ + K E + + E G + TK+Q+ + I + T EK +
Sbjct: 574 LVAEQVGNFGKRLEPYGIKVSELTGDRQL---TKQQIAETQIIVTTPEKYDVITRKATDT 630
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKS----IQIFAMSATIGNINALS 116
+ I+ + LI IDE H+L++ RGP++E +VS+ L + ++I +SAT+ N ++
Sbjct: 631 SYINLVRLICIDEIHLLHD-DRGPVIESIVSRTLRHSEQTGDHVRIVGLSATLPNYRDVA 689
Query: 117 TFI-----EGITYVENS-RPTK-HSEYVTV-DKRVFQSFDGKSLTEI-YADNLDYSLTGS 167
+F+ +G+ + + + RP E++ V DK+ + K++ ++ Y L+
Sbjct: 690 SFLRVDPDKGLFHFDGTFRPCPLKQEFIGVTDKKAIKQL--KTMNDVCYTKVLE------ 741
Query: 168 GPDAVLHLVQGNLMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLI--EALKEE 225
+ + +LIF S+ + A ++ D+ + K + D E L+EE
Sbjct: 742 ------QVGEHRNQMLIFVHSRKETAKTAKYIR-DKALEEETIGKILRSDAASREILREE 794
Query: 226 NDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQR 285
++ + +L++ + YG HHA ++ +R +E+ + G++Q++ CT+TLA GVNLPA
Sbjct: 795 SESIQNADLKDVMPYGFGIHHAGMSRADRTSVEDLFADGSIQVLVCTATLAWGVNLPAHT 854
Query: 286 VIIRDSYV----GRDFISLNMYK--QMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMN 339
VII+ + + ++ L+ QM+GRAGR GE I++ T + + S++N
Sbjct: 855 VIIKGTQIYSPEKGSWVELSPQDVLQMLGRAGRPQYDTYGEGIIIT-TQSEIQYYLSLLN 913
Query: 340 AGPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQ-LKSP 388
PI S + +L E+V N+ S E V L LF + L+SP
Sbjct: 914 QQ-LPIESQLISKLADNLNAEIVLGNVRSRDEAVDWLGYTYLFVRMLRSP 962
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 82/394 (20%), Positives = 165/394 (41%), Gaps = 43/394 (10%)
Query: 15 EFKFYLEEYAGVKGQYPPTK---------RQLNKKSIYICTIEKGSKLIGSLIQENRIDE 65
++K + E +G+ G K R L K + + T + L + +
Sbjct: 1419 QYKNWNERLSGLSGGKDIVKLTGETTADLRLLEKGDLILATPSQWDSLSRQWQRRKNVQS 1478
Query: 66 IGLIVIDEFHMLNEPQRGPILECVVSKV----LYLKKSIQIFAMSATIGNINALSTFIEG 121
+ L++ DE HML G + E VVS++ L+ ++I +S ++ N + +I
Sbjct: 1479 VSLLIADELHMLGG-SNGHVYEIVVSRMQAMATQLESKLRIVGLSVSLSNARDIGEWIGA 1537
Query: 122 ITY-VENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNL 180
+ + N P + + + + F SL A ++T PD
Sbjct: 1538 NKHTIYNFSPAIRAVPLELKIQSFTIPHFPSLMMAMARPTYSAITQMSPDKP-------- 1589
Query: 181 MVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEA---LKEENDGKLSTNLEEC 237
++F ++ N A L F+ + + DL E L++ N+ L+T+L
Sbjct: 1590 -AMVFVPNRKQARNSATDL-FNACIADDDEDRFLNVDLSEIQPILEKINEQALATSLS-- 1645
Query: 238 ILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS--YVGR 295
+G+ Y H L + ++R ++ + G +Q++ + ++ A V+++ + Y GR
Sbjct: 1646 --HGIGYFHEALNSFDKRAVQHLFKVGAIQVMIVSRDSCWEIDSSAHLVVVQGTQFYEGR 1703
Query: 296 DF----ISLNMYKQMVGRAGRTGLQESGESI-MLCKTMQDFLRFSSMMNAGPEPISSHMD 350
+ ++ QM G+AGR GL +S + + ML +++ + +N PI S++
Sbjct: 1704 EHRYVDYPISDILQMFGKAGRVGLDKSAKGVLMLPAVKREY--YKKFLNEA-LPIESYLH 1760
Query: 351 PPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQ 384
L D + ++A S ++ +T FY+
Sbjct: 1761 -DYLHDAFVAEISAKTIESTQEAVDWSTYTYFYR 1793
>gi|332218559|ref|XP_003258423.1| PREDICTED: activating signal cointegrator 1 complex subunit 3 isoform
1 [Nomascus leucogenys]
Length = 2202
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 107/397 (26%), Positives = 184/397 (46%), Gaps = 51/397 (12%)
Query: 14 EEFKFYLEEYAGVK-----GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGL 68
+++K +EE G K G P + + K + + T EK + S N + ++ +
Sbjct: 1390 DDWKVRIEEKLGKKVIELTGDVTPDVKSIAKADLIVTTPEKWDGVSRSWQNRNYVQQVTI 1449
Query: 69 IVIDEFHMLNEPQRGPILECVVSKVLYL----KKSIQIFAMSATIGNINALSTFIE---- 120
++IDE H+L E +RGP+LE +VS+ ++ +K ++I +S + N L+ ++
Sbjct: 1450 LIIDEIHLLGE-ERGPVLEVIVSRTNFISSHTEKPVRIVGLSTALANARDLADWLNIKQM 1508
Query: 121 GITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNL 180
G+ N RP+ + V Q F G+ A S+ A+
Sbjct: 1509 GLF---NFRPSVRPVPLEVH---IQGFPGQHYCPRMA-----SMNKPAFQAIRSHSPAK- 1556
Query: 181 MVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQ-------EKEDLIEALKEENDGKLSTN 233
VLIF SS+ AL L F T+E KQ E E++I +++ +N
Sbjct: 1557 PVLIFVSSRRQTRLTALELI--AFLATEEDPKQWLNMDEREMENIIATVRD-------SN 1607
Query: 234 LEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS-- 291
L+ + +G+ HHA L +R+ +EE ++ +Q++ TSTLA GVN PA VII+ +
Sbjct: 1608 LKLTLAFGIGMHHAGLHERDRKTVEELFVNCKVQVLIATSTLAWGVNFPAHLVIIKGTEY 1667
Query: 292 YVG--RDFISLNMYK--QMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISS 347
Y G R ++ + QM+GRAGR + G++++L ++ F P P+ S
Sbjct: 1668 YDGKTRRYVDFPITDVLQMMGRAGRPQFDDQGKAVILVHDIKK--DFYKKFLYEPFPVES 1725
Query: 348 HMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQ 384
+ L D + +A +S +D I T F++
Sbjct: 1726 SL-LGVLSDHLNAEIAGGTITSKQDALDYITWTYFFR 1761
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 93/368 (25%), Positives = 167/368 (45%), Gaps = 32/368 (8%)
Query: 33 TKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEI-GLIVIDEFHMLNEPQRGPILECVVS 91
+K ++ + + + T EK + + + + +I L+++DE H+L+E RGP+LE +V+
Sbjct: 571 SKSEILRTQMLVTTPEKWDVVTRKSVGDVALSQIVKLLILDEVHLLHE-DRGPVLESIVA 629
Query: 92 KVLYLKKS----IQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSF 147
+ L +S I+I +SAT+ N ++TF+ Y+ D R
Sbjct: 630 RTLRQVESTQSMIRILGLSATLPNYLDVATFLHVNPYIG---------LFFFDGRFRPVP 680
Query: 148 DGKSLTEIYADNLDYSLTGSGP---DAVLHLVQGNLMVLIFCSSKIACSNLALRLQFDRF 204
G++ I N L + VL V+ V++F ++ A A+ L +R
Sbjct: 681 LGQTFLGIKCANKMQQLNNMDEVCYENVLKQVKAGHQVMVFVHARNATVRTAMSL-IERA 739
Query: 205 PGTKE---YKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAY 261
+ + D + A K+ + + + E G + HHA + +R L+E +
Sbjct: 740 KNCGHIPFFFPTQGHDYVLAEKQVQRSR-NKQVRELFPDGFSIHHAGMLRQDRNLVENLF 798
Query: 262 LAGTLQIICCTSTLAAGVNLPAQRVIIRDS--YVGR--DFISLNMYK--QMVGRAGRTGL 315
G ++++ CT+TLA GVNLPA VII+ + Y + F+ L + Q+ GRAGR
Sbjct: 799 SNGHIKVLVCTATLAWGVNLPAHAVIIKGTQIYAAKRGSFVDLGILDVMQIFGRAGRPQF 858
Query: 316 QESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKT 375
+ GE +++ T D L + PI S +L D + +A +++E+
Sbjct: 859 DKFGEGVII--TTHDKLSHYLTLLTQRNPIESQF-LESLADNLNAEIALGTVTNVEEAVK 915
Query: 376 LIKHTLFY 383
I +T Y
Sbjct: 916 WISYTYLY 923
>gi|241955152|ref|XP_002420297.1| pre-mRNA-splicing helicase, putative [Candida dubliniensis CD36]
gi|223643638|emb|CAX42521.1| pre-mRNA-splicing helicase, putative [Candida dubliniensis CD36]
Length = 1985
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 106/378 (28%), Positives = 192/378 (50%), Gaps = 50/378 (13%)
Query: 33 TKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSK 92
+K+Q+ + I + T EK I + + + + L++IDE H+L++ +RGP+LE +VS+
Sbjct: 470 SKQQIAETQIIVTTPEKWD--IITRKDPSYVKLVKLVIIDEIHLLHD-ERGPVLESLVSR 526
Query: 93 VLYLKKS----IQIFAMSATIGNINALSTFI----EGITYVENS-RPTKHSE-YVTVDKR 142
+ ++ I+I +SAT+ N ++ FI EG+ Y + S RP + Y+ V ++
Sbjct: 527 AIRKSETTGFDIRIVGLSATLPNYADVAKFIRAKPEGLFYFDASYRPCPLEQVYIGVKEQ 586
Query: 143 VFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSK----IACSNLALR 198
K++ I A + + D + +Q + ++IF S+ L +
Sbjct: 587 -------KAIKRIAA------MNEACYDRMYQSLQDHHQLIIFVHSRKETFTTAKYLMEK 633
Query: 199 LQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIE 258
L D E+E + E LK+E++ ++ L+E I G HHA LT +R +E
Sbjct: 634 LDIDIV---------EQEGVKEILKQESESMSNSKLKEVIPQGFGIHHAGLTKQDRSTVE 684
Query: 259 EAYLAGTLQIICCTSTLAAGVNLPAQRVIIR--DSYVGRDFISLNMYK----QMVGRAGR 312
+ + G L+++ T+TLA GVNLPA VII+ ++Y + + QM+GRAGR
Sbjct: 685 DLFAQGHLRVLVSTATLAWGVNLPAHTVIIKGTETYSPESGTWVQLSPQDILQMLGRAGR 744
Query: 313 TGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAANLCSSLED 372
++GE I++ T QD +++ + PI S + + ++ EVV+ ++ + E
Sbjct: 745 PRYDKNGEGIII--TSQDEVQYYLAILNQQLPIESQLIHKLVDNISAEVVSGSITTIEEG 802
Query: 373 VKTLIKHTLFY--QLKSP 388
++ L +T F+ L+SP
Sbjct: 803 IEWL-SYTYFFVRMLRSP 819
>gi|212534272|ref|XP_002147292.1| DEAD/DEAH box DNA helicase (Mer3), putative [Talaromyces marneffei
ATCC 18224]
gi|210069691|gb|EEA23781.1| DEAD/DEAH box DNA helicase (Mer3), putative [Talaromyces marneffei
ATCC 18224]
Length = 1378
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 100/356 (28%), Positives = 170/356 (47%), Gaps = 64/356 (17%)
Query: 6 YQSLAKA--AEEFKFYLEEY-------AGVKGQYPPTKRQL-NKKSIYICTIEKGSKLIG 55
YQ+ +A +E F+ + +++ A + G T+ +L SI I T EK +
Sbjct: 216 YQAPTRALCSERFRDWSKKFNSLGLQCAELTGDTDYTQSRLVQTASIIITTPEKWDSMTR 275
Query: 56 SLIQENRIDE-IGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINA 114
+++ + I L +IDE H+LNE RG LE VVS++ + +++ A+SATI N
Sbjct: 276 RWRDHSKLMQLIRLFLIDEVHVLNE-TRGAALEAVVSRMKSVGSNVRFIALSATIPNSED 334
Query: 115 LSTFI-----------EGITYVENSRPTKHSEYV-----TVDKRVFQSFDGKSLTEIYAD 158
++T++ + E RPTK ++V T + F G L +I +
Sbjct: 335 IATWLGKNDTLQHLPAHKEHFGEEFRPTKLQKFVYGYPCTGNDFAFDRLLGSKLPDIISK 394
Query: 159 NLDYSLTGSGPDAVLHLVQGNLMVLIFC---SSKIACSNLALRLQFDRFPGTKEYKKQEK 215
+ + P ++IFC +S I+ + +L + P + + +
Sbjct: 395 H-----SNKKP------------MMIFCCTRNSAISTAKELAKLWSNTVPQRRLWAGPVR 437
Query: 216 EDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTL 275
++ +T+L + GVA+HHA L + +R +E+A+L G L IICCTSTL
Sbjct: 438 MPVVR----------NTDLRALVNSGVAFHHAGLDSDDRHAVEKAFLEGKLSIICCTSTL 487
Query: 276 AAGVNLPAQRVIIRDSYVG-----RDFISLNMYKQMVGRAGRTGLQESGESIMLCK 326
A GVNLP VII+++ +++ L M QM+GRAGR ++ +++L K
Sbjct: 488 AVGVNLPCYLVIIKNTVCWQEGGCKEYTDLEMM-QMLGRAGRPQFDDTAVAVILTK 542
>gi|348534859|ref|XP_003454919.1| PREDICTED: activating signal cointegrator 1 complex subunit 3
[Oreochromis niloticus]
Length = 2202
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 107/395 (27%), Positives = 184/395 (46%), Gaps = 47/395 (11%)
Query: 14 EEFKFYLEEYAG-----VKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGL 68
E++K +EE G + G P R + K + + T EK + S + + ++ +
Sbjct: 1393 EDWKVRIEEKLGKNVVELTGDVTPDMRAIAKADLIVTTPEKWDGVSRSWQNRSYVQKVAI 1452
Query: 69 IVIDEFHMLNEPQRGPILECVVSKVLYLK----KSIQIFAMSATIGNINALSTFIEGITY 124
++IDE H+L E RGP+LE +VS+ ++ KS+++ +S + N L+ ++ GI
Sbjct: 1453 LIIDEIHLLGE-DRGPVLEVIVSRTNFISSHTSKSVRVVGLSTALANARDLADWL-GIGQ 1510
Query: 125 VE--NSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMV 182
V N RP+ + V F G+ A S+ A+ V
Sbjct: 1511 VGLFNFRPSVRPVPLEVH---IHGFPGQHYCPRMA-----SMNKPTFQAIRSHSPAK-PV 1561
Query: 183 LIFCSSKIACSNLALRLQFDRFPGTKEYKKQ-------EKEDLIEALKEENDGKLSTNLE 235
LIF SS+ AL L + T++ KQ E ED+I +++ +NL+
Sbjct: 1562 LIFVSSRRQTRLTALDLI--AYLATEDNPKQWLHQDEREIEDIIGTVRD-------SNLK 1612
Query: 236 ECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS--YV 293
+ +G+ HHA L +R+ +EE ++ +Q++ TSTLA GVN PA V+++ + Y
Sbjct: 1613 LTLAFGIGMHHAGLHERDRKTVEELFVNCKIQVLIATSTLAWGVNFPAHLVVVKGTEYYD 1672
Query: 294 G--RDFISLNMYK--QMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHM 349
G R ++ + QM+GRAGR + G++++L ++ F P P+ S +
Sbjct: 1673 GKSRRYVDYPITDVLQMMGRAGRPQFDDQGKAVILVHDIKK--DFYKKFLYEPFPVESSL 1730
Query: 350 DPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQ 384
L D + +AA SS +D I T F++
Sbjct: 1731 -LSVLSDHLNAEIAAGTISSKQDAMDYITWTYFFR 1764
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 146/309 (47%), Gaps = 27/309 (8%)
Query: 33 TKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEI-GLIVIDEFHMLNEPQRGPILECVVS 91
TK ++ + + + T EK + + + + +I L+++DE H+L+E RGP+LE +V+
Sbjct: 574 TKGEILRTQMLVTTPEKWDVVTRKSVGDVALSQIVRLLILDEVHLLHE-DRGPVLESLVA 632
Query: 92 KVLYLKKS----IQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSF 147
+ + +S I+I +SAT+ N ++TF+ ++ D R
Sbjct: 633 RTIRQVESTQSMIRILGLSATLPNYLDVATFLHVNPFI---------GLFFFDGRFRPVP 683
Query: 148 DGKSLTEIYADN---LDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRL-QFDR 203
G++ I +N + + D VL V+ V++F ++ A A+ L + +
Sbjct: 684 LGQTFVGIKTNNKIQQIHDMEEVCYDKVLEQVKAGHQVMVFVHARNATVRTAMGLIEMAK 743
Query: 204 FPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLA 263
G + + ++ +++ + ++E G HHA + +R L+E +
Sbjct: 744 NRGEICFFQPDQGSDYGQCEKQIQRSRNKQMKEMFPEGFGIHHAGMLRSDRSLMESMFSR 803
Query: 264 GTLQIICCTSTLAAGVNLPAQRVIIR-----DSYVGR--DFISLNMYKQMVGRAGRTGLQ 316
G L+++ CT+TLA GVNLPA VII+ D+ G D L++ Q+ GRAGR
Sbjct: 804 GHLKVLVCTATLAWGVNLPAHAVIIKGTQIYDAKRGAVVDLGILDVM-QIFGRAGRPQFD 862
Query: 317 ESGESIMLC 325
+ GE ++
Sbjct: 863 KYGEGTIIT 871
>gi|307212510|gb|EFN88241.1| Putative U5 small nuclear ribonucleoprotein 200 kDa helicase
[Harpegnathos saltator]
Length = 2134
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 123/480 (25%), Positives = 216/480 (45%), Gaps = 93/480 (19%)
Query: 28 GQYPPTKRQLNKKSIYICTIEK--------GSKLIGSLIQENRIDEIGLIVIDEFHMLNE 79
G + T+ Q+ + +CT EK G K SL++ LI+IDE H+L++
Sbjct: 565 GDHQLTREQIAATQVIVCTPEKWDIITRKGGEKTFTSLVR--------LIIIDEIHLLHD 616
Query: 80 PQRGPILECVVSKVLY----LKKSIQIFAMSATIGNINALSTFIE-----GITYVENS-R 129
+RGP+LE +V++ + ++ +++ +SAT+ N ++ F+ G+ Y +NS R
Sbjct: 617 -ERGPVLEALVARTIRNIETTQEDVRLVGLSATLPNYQDVAAFLRIKPETGLFYFDNSFR 675
Query: 130 PTK-HSEYVTV-DKRVFQSFDGKSLTEI-YADNLDYSLTGSGPDAVLHLVQGNLMVLIFC 186
P +Y+ V +K+ + F + + EI Y ++++ G VLIF
Sbjct: 676 PVALEQQYIGVTEKKALKRF--QVMNEIVYEKTMEHA--------------GRNQVLIFV 719
Query: 187 SSKIACSNLALRL-----------QFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLE 235
S+ A + QF R E +E L+ E + + L+
Sbjct: 720 HSRKETGKTARAIRDMCLEKDTLGQFLR----------EGSASMEVLRTEAEQVKNQELK 769
Query: 236 ECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYV-- 293
+ + YG A HHA +T +R L+E+ + +Q++ T+TLA GVNLPA VII+ + V
Sbjct: 770 DLLPYGFAIHHAGMTRVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQVYN 829
Query: 294 ---GRDFISLNMYK--QMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSH 348
GR ++ L QM+GRAGR GE I++ + + S++N PI S
Sbjct: 830 PEKGR-WVELGALDVLQMLGRAGRPQYDTKGEGILIT-NHSELQYYLSLLNQQL-PIESQ 886
Query: 349 MDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFY--QLKSPE---------DQQTFLET 397
+ + D++ V ++ D T I +T Y L+ P Q + LE
Sbjct: 887 L-ISKMSDMLNAEVVLGTIQNIRDAVTWIGYTYLYIRMLRCPNLYGISHDKLKQDSLLEL 945
Query: 398 TLSEIVASL---LASKGTMLTMNEAGHLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLN 454
++++ S L G + ++G+ T + + A +H+ + Y+ LL L+
Sbjct: 946 HRADLIHSAAVGLDRSGLIKYDRKSGNFQATELGRIASHYYCTHE-TMATYNQLLKRTLS 1004
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 94/406 (23%), Positives = 170/406 (41%), Gaps = 62/406 (15%)
Query: 37 LNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLY- 95
L K I I T +K L Q + I L ++DE ++ + GP+LE S+ Y
Sbjct: 1413 LAKGQIIITTADKWDVLSRRWKQRKNVQNIQLFIVDELQLIG-GEEGPVLEVACSRARYI 1471
Query: 96 ---LKKSIQIFAMSATIGNINALSTFIEG-----ITYVENSRPTKHSEYVTVDKRVFQSF 147
L+K +I A+SA++ + + ++ + + RP
Sbjct: 1472 SSQLEKPTRIIALSASLADAKDAAQWLGAPAAATFNFHPSVRPVP--------------- 1516
Query: 148 DGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLM-------VLIFCSSKIACSNLALRL- 199
E++ ++ + S A+ V ++ V++F ++ A+ L
Sbjct: 1517 -----LELHVQGINVTHNASRLAAMAKPVYNAILRHASHKPVIVFVPTRRQARLTAIDLL 1571
Query: 200 QFDRFPGT-KEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIE 258
F G + E+ D+ L D + L+E + GVAY H L+A +RRL+E
Sbjct: 1572 TFTAAEGQPSRFFHAEEADIKPFL----DRMVDKTLKETLSQGVAYLHEGLSADDRRLVE 1627
Query: 259 EAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS--YVGR-----DFISLNMYKQMVGRAG 311
+ + +G +Q+ T L G+++ + V++ D+ Y G+ D+ ++ QMV RA
Sbjct: 1628 QLFDSGAIQVAVATRDLCWGLSISSHLVVVMDTQCYNGKTHAYEDYPITDVL-QMVARAN 1686
Query: 312 RTGLQESGESIMLCK-TMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAANLCSSL 370
R + + ++LC+ + +DF F +N P P+ SH+D E+V + +
Sbjct: 1687 RPLEDDDAKCVLLCQSSKKDF--FKKFLNE-PLPVESHLDRRLHDHFNAEIVTKTIENKQ 1743
Query: 371 EDVKTLIKHTLFYQLKSPED-------QQTFLETTLSEIVASLLAS 409
+ V L L+ +L + L LSE+V S LA
Sbjct: 1744 DAVDYLTWTFLYRRLTQNPNYYGLQGVTHRHLSDHLSELVESTLAD 1789
>gi|297824187|ref|XP_002879976.1| hypothetical protein ARALYDRAFT_483318 [Arabidopsis lyrata subsp.
lyrata]
gi|297325815|gb|EFH56235.1| hypothetical protein ARALYDRAFT_483318 [Arabidopsis lyrata subsp.
lyrata]
Length = 2168
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 131/515 (25%), Positives = 226/515 (43%), Gaps = 87/515 (16%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V E SL++ +++ ++E +G + T +++ + I + T EK +
Sbjct: 572 LVAEVVDSLSQRLKDYGVTVKELSGDQSL---TGQEIKETQIIVTTPEKWDIITRKSGDR 628
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLY----LKKSIQIFAMSATIGNINALS 116
+ L++IDE H+L++ RGP+LE +V++ L K+ I++ +SAT+ N + ++
Sbjct: 629 TYTQLVRLLIIDEIHLLHD-NRGPVLESIVARTLRQIETTKEHIRLVGLSATLPNCDDVA 687
Query: 117 TFIE-----GITYVENS-RPTKHSE-YVTVDK----RVFQSFDGKSLTEIYADNLDYSLT 165
F+ G+ + S RP S+ Y+ V+ R FQ + ++ A
Sbjct: 688 LFLRVDLKNGLFKFDRSYRPVPLSQQYIGVNVKKPLRRFQLMNDICYQKVVA-------- 739
Query: 166 GSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRLQ--------FDRFPGTKEYKKQEKED 217
V G VLIF S+ + A ++ RF ++ +
Sbjct: 740 ----------VAGKHQVLIFVHSRKETAKTARAIRDTAMANNTLSRFLKEDSQSREILQS 789
Query: 218 LIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAA 277
L E LK +++L+E + YG A HHA LT +R ++E + G LQ++ T+TLA
Sbjct: 790 LTELLK-------NSDLKELLPYGFAIHHAGLTRTDREIVENQFRLGNLQVLISTATLAW 842
Query: 278 GVNLPAQRVIIRDSYV-------GRDFISLNMYKQMVGRAGRTGLQESGESIMLC--KTM 328
GVNLPA VII+ + V + L++ QM+GRAGR + GE I++ +
Sbjct: 843 GVNLPAHTVIIKGTQVYNPERGAWMELSPLDVM-QMIGRAGRPQYDQQGEGIIITGYSEL 901
Query: 329 QDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKTL---------IKH 379
Q +LR +MN PI S L E+V + ++ E + L +++
Sbjct: 902 QYYLR---LMNEQL-PIESQFISKLADQLNAEIVLGTIQNAREACRWLGYTYLYVCMVRN 957
Query: 380 TLFYQLKSPEDQQTFLETTLSEIVASLLASKGTMLTMN-------EAGHLSLTSIAKAAV 432
Y + + L L E A L+ S T+L N ++GH +T + + A
Sbjct: 958 PTLYGVPPDALAKDLL---LEERRADLIHSAATILDKNNLIKYDRKSGHFQVTDLGRIAS 1014
Query: 433 QAGLSHDVCLIIYSDL--LHNKLNFCLLNSLHMLF 465
++H +L N + C L SL F
Sbjct: 1015 YYYITHGTIAAYNENLKPTMNDIELCRLFSLSEEF 1049
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 138/312 (44%), Gaps = 45/312 (14%)
Query: 37 LNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYL 96
L K I I T EK L Q I ++ L ++DE H++ Q GP+LE +VS++ Y+
Sbjct: 1445 LEKGQIIISTPEKWDALSRRWKQRKYIQQVSLFIVDELHLIG-GQGGPVLEVIVSRMRYI 1503
Query: 97 KKS----IQIFAMSATIGNINALSTFIEG-----ITYVENSRPTKHSEYV-TVDKRVF-- 144
I+I A+S ++ N L +I + N RP ++ VD F
Sbjct: 1504 SSQVGNKIRIVALSTSLANAKDLGEWIGASSCGFFNFPPNVRPVPLEIHIHGVDILSFEA 1563
Query: 145 --QSFDGKSLTEI--YADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRLQ 200
Q+ + T I +A N ++ +HL +L IA S++ +Q
Sbjct: 1564 RMQAMTKPTYTAIVQHARNKKPAIVFVPTRKHVHLTDVDL---------IAYSHMD-NMQ 1613
Query: 201 FDRFP-GTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEE 259
F G E E E ++ + EE L+E + +GV Y H L+ ++ ++ +
Sbjct: 1614 NPHFLLGNLE----ELEPFVKQICEET-------LKETLRHGVGYLHEGLSNLDQEIVTQ 1662
Query: 260 AYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS--YVGRDFISLNM----YKQMVGRAGRT 313
+ AG +Q+ +S+L G L A V++ + Y GR+ L+ QM+GR R
Sbjct: 1663 LFEAGRIQVCVMSSSLCWGTPLKAHLVVVMGTQFYDGRENSHLDYPISDLLQMMGRGSRP 1722
Query: 314 GLQESGESIMLC 325
L +G+ ++ C
Sbjct: 1723 LLDNAGKCVIFC 1734
>gi|195477906|ref|XP_002086430.1| GE23129 [Drosophila yakuba]
gi|194186220|gb|EDW99831.1| GE23129 [Drosophila yakuba]
Length = 1733
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 103/381 (27%), Positives = 183/381 (48%), Gaps = 50/381 (13%)
Query: 28 GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILE 87
G + T+ Q+ + +CT EK + + + + L++IDE H+L++ +RGP+LE
Sbjct: 571 GDHQLTREQIAATQVIVCTPEKWDIITRKGGERTFVSLVRLVIIDEIHLLHD-ERGPVLE 629
Query: 88 CVVSKVLY----LKKSIQIFAMSATIGNINALSTFI-----EGITYVENS-RPTK-HSEY 136
+V++ + ++ +++ +SAT+ N ++TF+ +G+ Y +NS RP +Y
Sbjct: 630 ALVARTIRNIETTQEEVRLVGLSATLPNYQDVATFLRVKPDKGLFYFDNSYRPVSLEQQY 689
Query: 137 VTV-DKRVFQSFDGKSLTEI-YADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSN 194
+ V +K+ + F + + EI Y ++++ G VL+F S+
Sbjct: 690 IGVTEKKALKRF--QVMNEIVYEKTMEHA--------------GRNQVLVFVHSRKETGK 733
Query: 195 LA-----LRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADL 249
A + L+ D +E +E L+ E + +T L+E + YG A HHA +
Sbjct: 734 TARAVRDMCLEQDTLGSFL----KEGSASMEVLRTEAEQVKNTELKELLPYGFAIHHAGM 789
Query: 250 TAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYV-----GRDFISLNMYK 304
T +R L+E+ + +Q++ T+TLA GVNLPA VII+ + V GR ++ L+
Sbjct: 790 TRVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQVYNPEKGR-WVELSALD 848
Query: 305 --QMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVV 362
QM+GRAGR GE I++ T L+F + PI S L D++ +
Sbjct: 849 VLQMLGRAGRPQYDTKGEGILI--TNHSELQFYLSLLNQQLPIESQF-ISKLPDMLNAEI 905
Query: 363 AANLCSSLEDVKTLIKHTLFY 383
L+D + +T Y
Sbjct: 906 VLGTVQHLQDAVNWLGYTYLY 926
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 87/339 (25%), Positives = 155/339 (45%), Gaps = 57/339 (16%)
Query: 39 KKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYL-- 96
K + I T +K L Q + + L ++DE ++ + GP++E V S++ Y+
Sbjct: 1011 KGQLVITTADKWDVLSRRWKQRKNVQLVNLFIVDELQLVG-GEDGPVMEIVCSRMRYISS 1069
Query: 97 --KKSIQIFAMSATIGNINALSTFI-----EGITYVENSRPTKHSEYVTVDKRVFQSFDG 149
+K I+I A+SA++ + ++ ++ + + RP ++ G
Sbjct: 1070 QIEKQIRIVALSASLTDARDVAQWLGCNPNATFNFHPSVRPIPLELHIQ----------G 1119
Query: 150 KSLTEIYADNLDYSLTGSGP--DAVLHLVQGNLMVLIFCSSKIACSNLALR--------L 199
++T N T S P +A+L + V++F SS+ A+ L
Sbjct: 1120 YNVTH----NATRIATMSKPVYNAILKY-SAHKPVIVFVSSRKQARLTAIDVLTYAASDL 1174
Query: 200 QFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEE 259
Q +RF +E ED+ L+ D L+E + GVAY H L+A + RL+E+
Sbjct: 1175 QPNRFFHAEE------EDIKPFLERMTD----KTLKETLAQGVAYLHEGLSASDHRLVEQ 1224
Query: 260 AYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS--YVGRDFISLNMYK-----QMVGRAGR 312
+ +G +Q+ + L G+++ A VII D+ Y G++ S Y QM+GRA R
Sbjct: 1225 LFDSGAVQVAVVSRDLCWGMSISAHLVIIMDTQFYNGKNH-SYEDYPITDVLQMIGRANR 1283
Query: 313 TGLQESGESIMLCK-TMQDFLRFSSMMNAGPEPISSHMD 350
+ +++C+ + +DF F +N P PI SH+D
Sbjct: 1284 PNEDADAKCVLMCQSSKKDF--FKKFINE-PLPIESHLD 1319
>gi|440900236|gb|ELR51421.1| Activating signal cointegrator 1 complex subunit 3 [Bos grunniens
mutus]
Length = 2201
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 107/397 (26%), Positives = 184/397 (46%), Gaps = 51/397 (12%)
Query: 14 EEFKFYLEEYAGVK-----GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGL 68
+++K +EE G K G P + + K + + T EK + S N + ++ +
Sbjct: 1390 DDWKVRIEEKLGKKVIELTGDVTPDMKSIAKADLIVTTPEKWDGVSRSWQNRNYVKQVTI 1449
Query: 69 IVIDEFHMLNEPQRGPILECVVSKVLYL----KKSIQIFAMSATIGNINALSTFIE---- 120
++IDE H+L E +RGP+LE +VS+ ++ +K ++I +S + N L+ ++
Sbjct: 1450 LIIDEIHLLGE-ERGPVLEVIVSRTNFISSHTEKPVRIVGLSTALANARDLADWLNIRQM 1508
Query: 121 GITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNL 180
G+ N RP+ + V Q F G+ A S+ A+
Sbjct: 1509 GLF---NFRPSVRPVPLEVH---IQGFPGQHYCPRMA-----SMNKPTFQAIRSHSPAK- 1556
Query: 181 MVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQ-------EKEDLIEALKEENDGKLSTN 233
VLIF SS+ AL L F T+E KQ E E++I +++ +N
Sbjct: 1557 PVLIFVSSRRQTRLTALELI--AFLATEEDPKQWLNMDEREMENIIGTIRD-------SN 1607
Query: 234 LEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS-- 291
L+ + +G+ HHA L +R+ +EE ++ +Q++ TSTLA GVN PA VII+ +
Sbjct: 1608 LKLTLAFGIGMHHAGLHERDRKTVEELFVNCKIQVLIATSTLAWGVNFPAHLVIIKGTEY 1667
Query: 292 YVG--RDFISLNMYK--QMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISS 347
Y G R ++ + QM+GRAGR + G++++L ++ F P P+ S
Sbjct: 1668 YDGKTRRYVDFPITDVLQMMGRAGRPQFDDQGKAVILVHDIKK--DFYKKFLYEPFPVES 1725
Query: 348 HMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQ 384
+ L D + +A +S +D I T F++
Sbjct: 1726 SL-LGVLSDHLNAEIAGGTITSKQDAMDYITWTYFFR 1761
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 102/380 (26%), Positives = 177/380 (46%), Gaps = 56/380 (14%)
Query: 33 TKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEI-GLIVIDEFHMLNEPQRGPILECVVS 91
+K ++ + + + T EK + + + + +I L+++DE H+L+E RGP+LE +V+
Sbjct: 571 SKNEILRTQMLVTTPEKWDVVTRKRVGDVALSQIVKLLILDEVHLLHE-DRGPVLESIVA 629
Query: 92 KVLYLKKS----IQIFAMSATIGNINALSTFIE-----GITYVENS-RPTKHSEYVTVDK 141
+ L +S I+I +SAT+ N ++TF+ G+ + + RP
Sbjct: 630 RTLRQVESTQSMIRILGLSATLPNYLDVATFLHVNPCIGLFFFDGRFRPVP--------- 680
Query: 142 RVFQSFDG-KSLTEIYA-DNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRL 199
+ Q+F G KS ++ +N+D ++VL V+ V++F ++ A A+ L
Sbjct: 681 -LGQTFLGIKSANKVQQLNNMDEVCY----ESVLKQVKAGHQVMVFVHARNATVRTAMSL 735
Query: 200 --------QFDRFPGTK--EYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADL 249
Q F T+ EY EK+ K N + E G + HHA +
Sbjct: 736 IERAKNNGQICYFLPTQGPEYGHAEKQ----VQKSRN-----RQVRELFPDGFSIHHAGM 786
Query: 250 TAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS--YVGR--DFISLNMYK- 304
+R L+E + G ++++ CT+TLA GVNLPA VII+ + Y + F+ L +
Sbjct: 787 LRQDRNLVESLFSNGHIKVLVCTATLAWGVNLPAHAVIIKGTQIYAAKRGSFVDLGILDV 846
Query: 305 -QMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVA 363
Q+ GRAGR + GE I++ T D L + PI S +L D + +A
Sbjct: 847 MQIFGRAGRPQFDKFGEGIII--TTHDKLSHYLSLLTQQNPIESQF-LESLADNLNAEIA 903
Query: 364 ANLCSSLEDVKTLIKHTLFY 383
+++E+ I +T Y
Sbjct: 904 LGTVTNVEEAVKWISYTYLY 923
>gi|397647968|gb|EJK77930.1| hypothetical protein THAOC_00205, partial [Thalassiosira oceanica]
Length = 1994
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 132/509 (25%), Positives = 225/509 (44%), Gaps = 80/509 (15%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V E ++ +K + + E +G T++Q+++ + + T EK +
Sbjct: 365 LVQEVVKNFSKRLGPYGVTVRELSGDSSL---TRQQISETQMIVTTPEKWDIVTRQGEGR 421
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLY----LKKSIQIFAMSATIGNINALS 116
+ L++IDE H+L++ RGP+LE +V++V+ + +++ +SAT+ N ++
Sbjct: 422 AYTQLVRLVIIDEIHLLHD-DRGPVLESIVARVIRQVETTAEPVRLVGLSATLPNYADVA 480
Query: 117 TFI-----EGITYVENS-RPTK-HSEYVTVDKR-VFQSFDGKSLTEIYADNLDYSLTGSG 168
TF+ G+ + ++S RP +Y+ + +R F+ F ++ EI +
Sbjct: 481 TFLRVKPSRGMYFFDHSYRPVPLQMQYLGITERNAFRRFALQN--EICYEK--------- 529
Query: 169 PDAVLHLVQGNLMVLIFCSSKIACSNLALRLQ-----------FDRFPGTKEYKKQEKED 217
AV GN M LIF S+ A L+ F R G +
Sbjct: 530 --AVGQRKAGNQM-LIFVHSRAETGKTAKALRDLAMEKDQLGLFVREGGATQ-------- 578
Query: 218 LIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAA 277
E L+EE D + +L++ + YG A HHA ++ +R L+E+ + G + ++CCT+TLA
Sbjct: 579 --EILREEVDTVKNADLKDVLKYGFAIHHAGMSRSDRELVEDLFADGHIGVLCCTATLAW 636
Query: 278 GVNLPAQRVIIR-----DSYVGRDFISLNMYK--QMVGRAGRTGLQESGESIMLCK--TM 328
GVNLPA VII+ D GR + L+ QM+GRAGR GE I++ + +
Sbjct: 637 GVNLPAHAVIIKGTQIYDPSKGR-WAELSPIDVLQMLGRAGRPQYDNEGEGIIMTQHSEL 695
Query: 329 QDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFY--QLK 386
Q +L +++ P+ S M L EVV + + E V L +T Y LK
Sbjct: 696 QYYLSLTNLQ----LPVESQMIKSLPDHLNAEVVLGTVQTIAEAVDWL-SYTFLYVRMLK 750
Query: 387 SP----------EDQQTF--LETTLSEIVASLLASKGTMLTMNEAGHLSLTSIAKAAVQA 434
+P D + T L+ A +L + +G L T + + A Q
Sbjct: 751 NPGTYGISDRAARDDPSLKARRTDLAHTAACMLERSHLVRYDRRSGSLQTTPLGRIASQY 810
Query: 435 GLSHDVCLIIYSDLLHNKLNFCLLNSLHM 463
+SH + L N + LL M
Sbjct: 811 YISHSSMAMYSRHLRPNMADIDLLRLFSM 839
>gi|190405727|gb|EDV08994.1| DEIH-box ATPase [Saccharomyces cerevisiae RM11-1a]
Length = 2162
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 110/386 (28%), Positives = 185/386 (47%), Gaps = 40/386 (10%)
Query: 24 AGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRG 83
A + G +++Q+++ + + T EK + ++ + L++IDE H+L++ RG
Sbjct: 585 AELTGDSRLSRKQIDETQVLVSTPEKWDITTRNSNNLAIVELVRLLIIDEIHLLHD-DRG 643
Query: 84 PILECVVSKVLYLKKSIQ----IFAMSATIGNINALSTFI----EGITYVENS-RPTKHS 134
P+LE +V++ + K Q I +SAT+ N + + F+ EG+ Y ++S RP S
Sbjct: 644 PVLESIVARTFWASKYGQEYPRIIGLSATLPNYDDVGRFLRVPKEGLFYFDSSFRPCPLS 703
Query: 135 E-YVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACS 193
+ + + +R SL ++ A + + + VL + +++F S+ S
Sbjct: 704 QQFCGIKER-------NSLKKLKA------MNDACYEKVLESINEGNQIIVFVHSRKETS 750
Query: 194 NLALRLQFDRFPGTKEYKKQEKEDL--IEALKEENDGKLSTNLEECILYGVAYHHADLTA 251
A L+ ++F K K D + LK E L +L + I G+ HHA LT
Sbjct: 751 RTATWLK-NKFAEENITHKLTKNDAGSKQILKTEAANVLDPSLRKLIESGIGTHHAGLTR 809
Query: 252 GERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYV------GRDFISLNMYKQ 305
+R L E+ + G LQ++ CT+TLA GVNLPA VII+ + V + +S Q
Sbjct: 810 SDRSLSEDLFADGLLQVLVCTATLAWGVNLPAHTVIIKGTDVYSPEKGSWEQLSPQDVLQ 869
Query: 306 MVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAAN 365
M+GRAGR GE I++ + + S++N PI S + +L EVVA N
Sbjct: 870 MLGRAGRPRYDTFGEGIIITD-QSNVQYYLSVLNQQL-PIESQFVSKLVDNLNAEVVAGN 927
Query: 366 L-CSSLEDVKTLIKHTLFY--QLKSP 388
+ C + D + +T Y L SP
Sbjct: 928 IKCRN--DAVNWLAYTYLYVRMLASP 951
>gi|255946984|ref|XP_002564259.1| Pc22g02150 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211591276|emb|CAP97503.1| Pc22g02150 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 1512
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 108/370 (29%), Positives = 179/370 (48%), Gaps = 42/370 (11%)
Query: 35 RQLNKKSIYICTIEKGSKLIGSLIQENRIDE-IGLIVIDEFHMLNEPQRGPILECVVSKV 93
R + I I T EK + ++ + + L +IDE H+L E RG LE VVS++
Sbjct: 308 RNVQASQIIITTPEKWDSMTRKWKDHMKLMQLVKLFLIDEVHILKE-TRGATLEAVVSRM 366
Query: 94 LYLKKSIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSFDGKSLT 153
+ +++ A+SATI N ++T++ G P H E+ + F+ K +
Sbjct: 367 KNIGSNVRFVALSATIPNSEDIATWL-GKDATNQHVPA-HREHFGEE---FRPVMLKKVV 421
Query: 154 EIYADNL-DYSLT---GSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRLQFDRF----- 204
YA +L D++ GS V+ + +LIFC ++ S+LA + R
Sbjct: 422 YGYASSLNDFAFDKVCGSKLPEVIGMHSCKKPILIFCCTR--NSSLATAKELARLFTLTN 479
Query: 205 PGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAG 264
P + +K+ +K +EA E+ L+ ++ GVA+HHA L +R +E + G
Sbjct: 480 PPARLWKEPKKR--LEAHNED--------LKTTLVAGVAFHHAGLGPADRHTVETGFREG 529
Query: 265 TLQIICCTSTLAAGVNLPAQRVIIRDSYVGRD-----FISLNMYKQMVGRAGRTGLQESG 319
+ +ICCTSTLA G+NLP VII+++ +D + L M QM+GRAGR +S
Sbjct: 530 NISVICCTSTLAVGINLPCHLVIIKNTVSWQDGGCKEYSDLEMM-QMLGRAGRPQFDDSA 588
Query: 320 ESIMLCKTMQDFLRFSSMMNAGPEPISS--HMDPPTLVD-LILEVVAANLCSSLEDVKTL 376
+++L T ++ + + G E + S H++ L+D L E+ N+ VK L
Sbjct: 589 TAVIL--TRKERVAHYERLVQGSESLESCLHLN---LIDHLNAEIGLGNISDIESAVKWL 643
Query: 377 IKHTLFYQLK 386
LF +L+
Sbjct: 644 AGTFLFVRLR 653
>gi|167385831|ref|XP_001737507.1| U5 small nuclear ribonucleoprotein 200 kDa helicase [Entamoeba dispar
SAW760]
gi|165899662|gb|EDR26206.1| U5 small nuclear ribonucleoprotein 200 kDa helicase, putative
[Entamoeba dispar SAW760]
Length = 1804
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 109/417 (26%), Positives = 199/417 (47%), Gaps = 44/417 (10%)
Query: 28 GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILE 87
G + P + K + + T EK + +++ + ++GL+++DE H+L E +RGP++E
Sbjct: 1087 GDFTPDSAAIAKADVILTTPEKWDGITRLWTKKSYVQKVGLVILDEVHLLGE-ERGPVIE 1145
Query: 88 CVVSKVLYLKKSI----QIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRV 143
+V++ + K + +I A++ I N++ + +I G+ ++S HS V +
Sbjct: 1146 AIVTRTKQINKKLGIQTRICALTTAIANVDDMMNWI-GVD--KDSVFNFHSSLRPVP--L 1200
Query: 144 FQSFDGKSLTEIYADNLDYSLTGSGP-DAVLHLVQGNLMVLIFCSSK----IACSNLALR 198
DG T+ Y + T + P + L + V+IF SS+ + +L
Sbjct: 1201 IAHIDGFP-TKAYCPRM---ATMNKPCYQAIRLHSPDKPVMIFVSSRRQTRLTAQDLVKF 1256
Query: 199 LQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIE 258
D P +++ E++ E K DG L +EC+LYG+ HHA L +R + E
Sbjct: 1257 CFNDGNP--QKFLHMPFEEMSEITKNITDGIL----KECLLYGIGMHHAGLNDHDREITE 1310
Query: 259 EAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS--YVGR--DFISLNMYK--QMVGRAGR 312
+ + + +QI+ T+TLA GVNLPA VII+ + + G+ F+ + + QM+GRAGR
Sbjct: 1311 KLFKSNKIQILITTATLAWGVNLPAHLVIIKGTEYFDGKKHQFVDMPLTDVLQMMGRAGR 1370
Query: 313 TGLQESGESIMLC-KTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAANLCSSLE 371
G +++L + +DFLR P P+ S+ + L E+ N+ + E
Sbjct: 1371 PQYDNEGVAVILTYEPKKDFLR---KFLFEPFPLESYFETVMADQLNAEIAVGNVTNVKE 1427
Query: 372 DVK---------TLIKHTLFYQLKSPEDQQTFLETTLSEIVASLLASKGTMLTMNEA 419
VK L+K+ +Y E FL + + + + L+++K + N+
Sbjct: 1428 AVKFLTFTYYFRRLLKNPNYYGYDGKEQIGKFLVSKVKDALNELVSAKCIEMDENDV 1484
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 91/325 (28%), Positives = 154/325 (47%), Gaps = 32/325 (9%)
Query: 16 FKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFH 75
FK +EE V G +K + + + T EK L E +++I L+++DE H
Sbjct: 255 FKMRVEE---VTGDTNISKAAIASTHVIVATPEKFDVLTRKQDAE-FVNDIQLLIVDEVH 310
Query: 76 MLNEPQRGPILECVVSKVLYL----KKSIQIFAMSATIGNINALSTFI----EGITYVEN 127
+L+E RG ++E +V++ L + ++ I++ +SAT+ N + FI E I + +
Sbjct: 311 LLDE-DRGAVIETIVARTLRMVESQQRPIRVVGLSATLPNYQDVGEFIRAKPENIFHFDM 369
Query: 128 S-RPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFC 186
S R S V + G+ T+ +A +L Y D +V+ V++F
Sbjct: 370 SYRAVPMSTKFIVLPEDEKENKGQQFTQ-HATDLAY-------DEAEIVVKRGKQVIVFV 421
Query: 187 SSKIACSNLALR-LQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYH 245
++ A R ++ + G EY K ++ GK +++E + G+ H
Sbjct: 422 HTRRETVLTAQRFIRRMKEKGATEYFTGNKGREFATRIKKLQGK---DIKELLEMGIGVH 478
Query: 246 HADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGR------DFIS 299
+A + +R IE+A+ G+L+++ T+TLA GVNLPA VIIR + V D IS
Sbjct: 479 NAGMFRSDRTFIEDAFRNGSLKVLVSTATLAWGVNLPAHTVIIRGTEVFNSDKGCSDKIS 538
Query: 300 LNMYKQMVGRAGRTGLQESGESIML 324
+ QM GRAGR G I++
Sbjct: 539 ILDVLQMFGRAGRPQYDSEGAGIII 563
>gi|350412276|ref|XP_003489593.1| PREDICTED: putative U5 small nuclear ribonucleoprotein 200 kDa
helicase-like [Bombus impatiens]
Length = 2134
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 127/507 (25%), Positives = 223/507 (43%), Gaps = 96/507 (18%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEK--------GSK 52
+V E + K + + E + G + T+ Q+ + +CT EK G K
Sbjct: 541 LVQEMVGTFGKRLSTYNLTVSE---LTGDHQLTREQIAATQVIVCTPEKWDIITRKGGEK 597
Query: 53 LIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLY----LKKSIQIFAMSAT 108
SL++ LI+IDE H+L++ +RGP+LE +V++ + ++ +++ +SAT
Sbjct: 598 TFTSLVR--------LIIIDEIHLLHD-ERGPVLEALVARTIRNIETTQEDVRLIGLSAT 648
Query: 109 IGNINALSTFIE-----GITYVENS-RPTK-HSEYVTV-DKRVFQSFDGKSLTEI-YADN 159
+ N ++ F+ G+ Y +NS RP +Y+ V +K+ + F + + EI Y
Sbjct: 649 LPNYQDVAAFLRIKPESGLFYFDNSFRPVALEQQYIGVTEKKALKRF--QVMNEIVYEKT 706
Query: 160 LDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRL-----------QFDRFPGTK 208
++++ G VL+F S+ A + QF R
Sbjct: 707 MEHA--------------GRNQVLVFVHSRKETGKTARAIRDMCLEKDTLGQFLR----- 747
Query: 209 EYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQI 268
E +E L+ E + + L++ + YG A HHA +T +R L+E+ + +Q+
Sbjct: 748 -----EGSASMEVLRTEAEQVKNQELKDLLPYGFAIHHAGMTRVDRTLVEDLFADRHIQV 802
Query: 269 ICCTSTLAAGVNLPAQRVIIRDSYV-----GRDFISLNMYK--QMVGRAGRTGLQESGES 321
+ T+TLA GVNLPA VII+ + V GR ++ L QM+GRAGR GE
Sbjct: 803 LVSTATLAWGVNLPAHTVIIKGTQVYNPEKGR-WVELGALDVLQMLGRAGRPQYDTKGEG 861
Query: 322 IMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTL 381
I++ + + S++N PI S + + D++ + ++ D T + +T
Sbjct: 862 ILIT-NHSELQYYLSLLNQQL-PIESQL-ISKMSDMLNAEIVLGTIQNIRDAVTWLGYTY 918
Query: 382 FY--QLKSPE----DQQTFLETTLSEI--------VASLLASKGTMLTMNEAGHLSLTSI 427
Y L+ P Q E L E+ A L G + ++G+ T +
Sbjct: 919 LYIRMLRCPSLYSISQDKLKEDPLLELHRADLIHSAAVALDRSGLIKYDRKSGNFQATEL 978
Query: 428 AKAAVQAGLSHDVCLIIYSDLLHNKLN 454
+ A +HD + IY+ LL L+
Sbjct: 979 GRIASHYYCTHD-TMSIYNQLLKRTLS 1004
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 82/335 (24%), Positives = 146/335 (43%), Gaps = 45/335 (13%)
Query: 37 LNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLY- 95
L K I I T +K L Q + I L ++DE ++ + GP+LE S+ Y
Sbjct: 1413 LAKGQIIITTADKWDVLSRRWKQRKNVQNIQLFIVDELQLIG-GEEGPVLEVACSRARYI 1471
Query: 96 ---LKKSIQIFAMSATIGNINALSTFIEG-----ITYVENSRPTKHSEYVTVDKRVFQSF 147
L K +I A+SA++ + + ++ + + RP +V
Sbjct: 1472 SSQLDKPTRIIALSASLADAKDAAQWLGAPAAATFNFHPSVRPVPLELHVQ--------- 1522
Query: 148 DGKSLTEIYADNLDYSLTGSGP--DAVL-HLVQGNLMVLIFCSSKIACSNLALRLQFDRF 204
G ++T N + P +A+L H ++V + + + + L L F
Sbjct: 1523 -GINITH----NASRLAAMAKPVYNAILRHASHKPVIVFVPTRRQARLTAIDL-LTFTAA 1576
Query: 205 PG-TKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLA 263
G + E+ D+ L D L+E + GVAY H L+ +R L+E+ + +
Sbjct: 1577 EGQPSRFFHAEEADIKPFLDRMTD----KTLKETLSQGVAYLHEGLSVDDRHLVEQLFDS 1632
Query: 264 GTLQIICCTSTLAAGVNLPAQRVIIRDS--YVGR-----DFISLNMYKQMVGRAGRTGLQ 316
G +QI T L G+++ + V++ D+ Y G+ D+ ++ QMV RA R
Sbjct: 1633 GAIQIAVATRDLCWGLSISSHLVVVMDTQCYNGKTHAYEDYPITDVL-QMVARANRPLED 1691
Query: 317 ESGESIMLCK-TMQDFLRFSSMMNAGPEPISSHMD 350
+ + ++LC+ + +DF F +N P P+ SH+D
Sbjct: 1692 DDAKCVLLCQSSKKDF--FKKFLNE-PLPVESHLD 1723
>gi|340709366|ref|XP_003393281.1| PREDICTED: putative U5 small nuclear ribonucleoprotein 200 kDa
helicase-like [Bombus terrestris]
Length = 2134
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 127/507 (25%), Positives = 223/507 (43%), Gaps = 96/507 (18%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEK--------GSK 52
+V E + K + + E + G + T+ Q+ + +CT EK G K
Sbjct: 541 LVQEMVGTFGKRLSTYNLTVSE---LTGDHQLTREQIAATQVIVCTPEKWDIITRKGGEK 597
Query: 53 LIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLY----LKKSIQIFAMSAT 108
SL++ LI+IDE H+L++ +RGP+LE +V++ + ++ +++ +SAT
Sbjct: 598 TFTSLVR--------LIIIDEIHLLHD-ERGPVLEALVARTIRNIETTQEDVRLIGLSAT 648
Query: 109 IGNINALSTFIE-----GITYVENS-RPTK-HSEYVTV-DKRVFQSFDGKSLTEI-YADN 159
+ N ++ F+ G+ Y +NS RP +Y+ V +K+ + F + + EI Y
Sbjct: 649 LPNYQDVAAFLRIKPESGLFYFDNSFRPVALEQQYIGVTEKKALKRF--QVMNEIVYEKT 706
Query: 160 LDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRL-----------QFDRFPGTK 208
++++ G VL+F S+ A + QF R
Sbjct: 707 MEHA--------------GRNQVLVFVHSRKETGKTARAIRDMCLEKDTLGQFLR----- 747
Query: 209 EYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQI 268
E +E L+ E + + L++ + YG A HHA +T +R L+E+ + +Q+
Sbjct: 748 -----EGSASMEVLRTEAEQVKNQELKDLLPYGFAIHHAGMTRVDRTLVEDLFADRHIQV 802
Query: 269 ICCTSTLAAGVNLPAQRVIIRDSYV-----GRDFISLNMYK--QMVGRAGRTGLQESGES 321
+ T+TLA GVNLPA VII+ + V GR ++ L QM+GRAGR GE
Sbjct: 803 LVSTATLAWGVNLPAHTVIIKGTQVYNPEKGR-WVELGALDVLQMLGRAGRPQYDTKGEG 861
Query: 322 IMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTL 381
I++ + + S++N PI S + + D++ + ++ D T + +T
Sbjct: 862 ILIT-NHSELQYYLSLLNQQL-PIESQL-ISKMSDMLNAEIVLGTIQNIRDAVTWLGYTY 918
Query: 382 FY--QLKSPE----DQQTFLETTLSEI--------VASLLASKGTMLTMNEAGHLSLTSI 427
Y L+ P Q E L E+ A L G + ++G+ T +
Sbjct: 919 LYIRMLRCPSLYSISQDKLKEDPLLELHRADLIHSAAVALDRSGLIKYDRKSGNFQATEL 978
Query: 428 AKAAVQAGLSHDVCLIIYSDLLHNKLN 454
+ A +HD + IY+ LL L+
Sbjct: 979 GRIASHYYCTHD-TMSIYNQLLKRTLS 1004
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 82/335 (24%), Positives = 146/335 (43%), Gaps = 45/335 (13%)
Query: 37 LNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLY- 95
L K I I T +K L Q + I L ++DE ++ + GP+LE S+ Y
Sbjct: 1413 LAKGQIIITTADKWDVLSRRWKQRKNVQNIQLFIVDELQLIG-GEEGPVLEVACSRARYI 1471
Query: 96 ---LKKSIQIFAMSATIGNINALSTFIEG-----ITYVENSRPTKHSEYVTVDKRVFQSF 147
L K +I A+SA++ + + ++ + + RP +V
Sbjct: 1472 SSQLDKPTRIIALSASLADAKDAAQWLGAPAAATFNFHPSVRPVPLELHVQ--------- 1522
Query: 148 DGKSLTEIYADNLDYSLTGSGP--DAVL-HLVQGNLMVLIFCSSKIACSNLALRLQFDRF 204
G ++T N + P +A+L H ++V + + + + L L F
Sbjct: 1523 -GINITH----NASRLAAMAKPVYNAILRHASHKPVIVFVPTRRQARLTAIDL-LTFTAA 1576
Query: 205 PG-TKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLA 263
G + E+ D+ L D L+E + GVAY H L+ +R L+E+ + +
Sbjct: 1577 EGQPSRFFHAEEADIKPFLDRMTD----KTLKETLSQGVAYLHEGLSVDDRHLVEQLFDS 1632
Query: 264 GTLQIICCTSTLAAGVNLPAQRVIIRDS--YVGR-----DFISLNMYKQMVGRAGRTGLQ 316
G +QI T L G+++ + V++ D+ Y G+ D+ ++ QMV RA R
Sbjct: 1633 GAIQIAVATRDLCWGLSISSHLVVVMDTQCYNGKTHAYEDYPITDVL-QMVARANRPLED 1691
Query: 317 ESGESIMLCK-TMQDFLRFSSMMNAGPEPISSHMD 350
+ + ++LC+ + +DF F +N P P+ SH+D
Sbjct: 1692 DDAKCVLLCQSSKKDF--FKKFLNE-PLPVESHLD 1723
>gi|452979280|gb|EME79042.1| hypothetical protein MYCFIDRAFT_156372 [Pseudocercospora fijiensis
CIRAD86]
Length = 2202
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 115/476 (24%), Positives = 220/476 (46%), Gaps = 64/476 (13%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V E+ + K E + + E G + TK+Q+ + + + T EK +
Sbjct: 590 LVQEQVGNFGKRLESYGITVSELTGDRQL---TKQQIAETQVIVTTPEKWDVITRKATDT 646
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKS----IQIFAMSATIGNINALS 116
+ + + LI IDE H+L++ RGP+LE +VS+ + + ++I +SAT+ N ++
Sbjct: 647 SYTNLVRLICIDEIHLLHD-DRGPVLESIVSRTIRRTEQTGDPVRIVGLSATLPNYRDVA 705
Query: 117 TFI-----EGITYVENS-RPTK-HSEYVTV-DKRVFQSFDGKSLTEI-YADNLDYSLTGS 167
TF+ + + + + + RP E++ V DK+ + K++ E+ Y L+
Sbjct: 706 TFLRVDPQKDLYHFDGTFRPCPLKQEFIGVTDKKAIKQL--KTMNEVCYTKVLE------ 757
Query: 168 GPDAVLHLVQGNLMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLI-------E 220
+ Q +LIF S+ + A +F K + +I E
Sbjct: 758 ------QVGQNKNQMLIFVHSRKETAKTA------KFIRDKALEADTIGQIIRSDAASRE 805
Query: 221 ALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVN 280
L+EE++ + +L++ + YG HHA ++ +R +E+ + +G +Q++ CT+TLA GVN
Sbjct: 806 ILREESETVANADLKDVLPYGFGIHHAGMSRADRTTVEDLFASGEIQVLVCTATLAWGVN 865
Query: 281 LPAQRVIIRDSYV----GRDFISLNMYK--QMVGRAGRTGLQESGESIMLCKTMQDFLRF 334
LPA VII+ + + ++ L+ QM+GRAGR GE I++ T + +
Sbjct: 866 LPAHTVIIKGTQIYSPEKGSWVELSPQDVLQMLGRAGRPQYDTYGEGIIIT-TQAEIQYY 924
Query: 335 SSMMNAGPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKTL---------IKHTLFYQL 385
S++N PI S +L E+V N+ + E V+ L ++ YQ+
Sbjct: 925 LSLLNQQ-LPIESQFVSRLADNLNAEIVLGNVRTRDEGVEWLGYTYLFVRMLRSPALYQV 983
Query: 386 KSPEDQQTFLETTLSEIVASLLA--SKGTMLTMN-EAGHLSLTSIAKAAVQAGLSH 438
+ ++ LE +++ S A K +++ + + G T + + A ++H
Sbjct: 984 GADYEEDETLEQKRVDLIHSAAAVLEKASLIKYDKKTGRFQSTDLGRVASHYYITH 1039
Score = 46.2 bits (108), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 60/290 (20%), Positives = 120/290 (41%), Gaps = 47/290 (16%)
Query: 63 IDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQ----IFAMSATIGNINALSTF 118
+ + LI+ D+ HML G I E V+S+ +K ++ +S ++ N + +
Sbjct: 1492 VQNVSLIIADDLHMLGG-HHGYIYEAVMSRSQAIKAQLENDLRTIGLSVSLSNARDIGEW 1550
Query: 119 IEG-----ITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVL 173
I + N+RP + ++ Q+F+ +L ++T A+L
Sbjct: 1551 IGCNKHTIFNFSPNNRPLPLNLHL-------QTFNIPHFP-----SLMLAMTKPTYQAIL 1598
Query: 174 HLVQGNLMVLIFCSSKIACSNLALRL--------QFDRFPGTKEYKKQEKEDLIEALKEE 225
+ +F S+ A L DRF + +E E ++ +KE
Sbjct: 1599 QYAPEKPTI-VFVPSRKQVRATAQDLLAACVADDNEDRF---LHAEAEELEKILAKVKER 1654
Query: 226 NDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQR 285
+ L E + +G+AY+H L+ ++R+ E + G Q++ + A + A
Sbjct: 1655 S-------LAESLAHGIAYYHEALSDSDKRIAEHLFTVGAAQVMLVSRDCAWEIQSFAHL 1707
Query: 286 VIIRDS--YVGRD--FISLNMYK--QMVGRAGRTGLQESGESIMLCKTMQ 329
VI+ + + GR+ +I + QM G+AGR + +++C ++
Sbjct: 1708 VIVMGTQFFEGREHRYIDYPISDVLQMFGKAGRPSEDKDARGVLMCPDVK 1757
>gi|157866176|ref|XP_001681794.1| putative RNA helicase [Leishmania major strain Friedlin]
gi|68125093|emb|CAJ02563.1| putative RNA helicase [Leishmania major strain Friedlin]
Length = 1985
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 103/372 (27%), Positives = 175/372 (47%), Gaps = 36/372 (9%)
Query: 33 TKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSK 92
TKR+L + + + T EK + E + ++ LI++DE H+LNE +RGP+LE +V++
Sbjct: 373 TKRELAETQVIVTTPEKWDVITRKQSNEELVSQVRLIIMDEIHLLNE-ERGPVLEALVAR 431
Query: 93 VLY-----LKKSIQIFAMSATIGNINALSTFI-----EGI-TYVENSRPTKHSEYVTVDK 141
L ++ +++ +SAT+ N ++ F+ EG+ + RP
Sbjct: 432 TLRHGELNPEQRVRLVGLSATLPNYKDVANFLQADLREGLKVFGPEYRPVP--------- 482
Query: 142 RVFQSFDG-KSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRLQ 200
+ Q+F G ++ + N ++ L + V+ V+ V++F S+ LA
Sbjct: 483 -LEQTFIGLQNTSGAPKRNKEFELDRLAYEEVVKNVREGHQVMVFVHSRKQTVGLAKYFI 541
Query: 201 FDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEA 260
+ +E+ Q K + A++++ +L G HHA L +R E
Sbjct: 542 EESTRRGEEHLFQYKGVMPSAIEKKGRTLQGRDLASLFAAGFGAHHAGLVRYDRTSTEGF 601
Query: 261 YLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYV------GRDFISLNMYKQMVGRAGRTG 314
+ G L+++CCTSTLA GVNLPA V+IR + + G IS+ Q+ GRAGR
Sbjct: 602 FRDGYLRVLCCTSTLAWGVNLPAHTVVIRGTQMYDPKRGGLVSISVLDVMQIFGRAGRPQ 661
Query: 315 LQESGESIMLC--KTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAANLCSSLED 372
SG I++ K + FLR + A PI S M L D + V A SS+ +
Sbjct: 662 FDTSGHGIIISDEKEVSHFLR----LIAHALPIESQMQ-GKLCDHLNAEVNAGTISSVME 716
Query: 373 VKTLIKHTLFYQ 384
+ +++T +Q
Sbjct: 717 ACSWLEYTYMWQ 728
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 108/408 (26%), Positives = 176/408 (43%), Gaps = 45/408 (11%)
Query: 26 VKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPI 85
+ G P L K I T EK + + + + + L+V DE HML RGPI
Sbjct: 1228 LSGDATPDISALAKADILCTTPEKWDGISRNWQVRSYVTAVKLVVFDEVHMLGT-DRGPI 1286
Query: 86 LECVVSKVLYL----KKSIQIFAMSATIGNINALSTF--IEGITYVENSRPTKHSEYVTV 139
LE +VS++ Y+ K I++ +S + N LS++ +E V N P+ +TV
Sbjct: 1287 LEVIVSRMRYIGWNRKAPIRLVGLSTAVSNPGDLSSWLGVEKKWAVFNFDPSVRPVPMTV 1346
Query: 140 DKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRL 199
+ GK+ A ++ +A+ V++F SS+ A+ L
Sbjct: 1347 H---IAGYHGKNYCPRMA-----TMNKPTYNAICE-KSPTQPVIVFVSSRRQTRLTAMAL 1397
Query: 200 -QFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIE 258
F G D ++ + D ++ C+ +GV HHA L G+R ++E
Sbjct: 1398 IGFLLMEGNTAKWVHMDVDQVQKYTSKLDDPY---VKHCLQFGVGIHHAGLLEGDRTIVE 1454
Query: 259 EAYLAGTLQIICCTSTLAAGVNLPAQRVIIR---------DSYVGRDFISLNMYKQMVGR 309
EA+L+ +Q++ TSTLA GVN PA V+++ +SYV DF ++ QM+GR
Sbjct: 1455 EAFLSNRIQVLVATSTLAWGVNFPAHMVVVKGTEYYDAKTNSYV--DFPITDVL-QMIGR 1511
Query: 310 AGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAANLCSS 369
AGR G + +LC + F P P+ S + V + E+V+ + +
Sbjct: 1512 AGRPQFDTEGVAQVLCHEPKK--GFYRKFLYDPFPVESALHKQLHVHINAEIVSGTINTR 1569
Query: 370 LEDVKTLIKHTLFYQLK-----------SPEDQQTFLETTLSEIVASL 406
+ V L LF ++ SP+ FL T + +A L
Sbjct: 1570 QDAVNYLTWTYLFRRIARNPSYYGLEDGSPKAVTIFLSTLVKGALADL 1617
>gi|383320755|ref|YP_005381596.1| Superfamily II helicase [Methanocella conradii HZ254]
gi|379322125|gb|AFD01078.1| Superfamily II helicase [Methanocella conradii HZ254]
Length = 988
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 121/482 (25%), Positives = 213/482 (44%), Gaps = 103/482 (21%)
Query: 15 EFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE--NRIDEIGLIVID 72
+FK Y+ G + YP R + + I T EK +Q+ + + + LIV+D
Sbjct: 99 DFKVYV--VTGERDLYPSEARAAD---VIITTPEKWDSATRKYMQDRYDFVRNVTLIVVD 153
Query: 73 EFHMLNEPQRGPILECVVSKVLYLKKS----IQIFAMSATIGNINALSTFIEG-----IT 123
E H+L+ RG LE V+S++ +K ++I A+SAT+ NI ++ +I +
Sbjct: 154 EVHLLDSDGRGGTLEAVISRMRRIKAQHGGRLRIVALSATMPNIVDVARWIGAPPECVLE 213
Query: 124 YVENSRPT-----------KHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAV 172
+ + RP K +E++ R++++FD + G
Sbjct: 214 FDGSYRPVELETEVLPYRPKPNEFLNKYVRLYRAFD--------------VIKG------ 253
Query: 173 LHLVQGNLMVLIFCSSKIACSNLALRL--------QFDRFPGTKEYKKQEKEDLIEALKE 224
L +G+ LIF S++ A +L + P ++ + QE ++ +E
Sbjct: 254 -ELAEGH-QALIFVSTRQDTHQAAEKLCEIVRKYCPYTLGP-SEAIRLQEMKNRVE---- 306
Query: 225 ENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQ 284
++ L+ C+ YG+A+HHA L+A ++ LIE + AG ++I+ TSTLA GVNLPA+
Sbjct: 307 ------NSRLKGCLPYGIAFHHAGLSAEDKALIEGGFRAGVIRILVSTSTLAWGVNLPAR 360
Query: 285 RVIIRDSYV-----GRDFISLNMYKQMVGRAGRTGLQESGESIMLCKT---------MQD 330
V++RD + G IS QM+GRAGR G G+ ++ ++D
Sbjct: 361 VVVVRDVEMYDPIQGNKDISPIDLLQMLGRAGRPGYDTKGKGYVIVPDERAAEYKALLKD 420
Query: 331 FLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQLKSPED 390
SM+ G ++ H++ +A + S+ D +K T +Y
Sbjct: 421 GKAIESMLEHG---LAEHLN---------AEIAVGMVKSVRDAAEWLKTTFYYVRSQSMG 468
Query: 391 QQTFLETTLSEIVASLLASKGTMLTMNEAGHLSLTSIAKAAVQAGLSHDVCLIIYSDLLH 450
Q ++ +E V L+++ ++G LS T + L+ D L + + LL
Sbjct: 469 QPPDVDALAAEKVRHLVSNG---FVREDSGVLSATPL------GALTSDFYLKLETALLF 519
Query: 451 NK 452
K
Sbjct: 520 KK 521
>gi|329663565|ref|NP_001193047.1| activating signal cointegrator 1 complex subunit 3 [Bos taurus]
gi|385178607|sp|E1BNG3.1|ASCC3_BOVIN RecName: Full=Activating signal cointegrator 1 complex subunit 3
Length = 2201
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 107/397 (26%), Positives = 184/397 (46%), Gaps = 51/397 (12%)
Query: 14 EEFKFYLEEYAGVK-----GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGL 68
+++K +EE G K G P + + K + + T EK + S N + ++ +
Sbjct: 1390 DDWKVRIEEKLGKKVIELTGDVTPDMKSIAKADLIVTTPEKWDGVSRSWQNRNYVKQVTI 1449
Query: 69 IVIDEFHMLNEPQRGPILECVVSKVLYL----KKSIQIFAMSATIGNINALSTFIE---- 120
++IDE H+L E +RGP+LE +VS+ ++ +K ++I +S + N L+ ++
Sbjct: 1450 LIIDEIHLLGE-ERGPVLEVIVSRTNFISSHTEKPVRIVGLSTALANARDLADWLNIRQM 1508
Query: 121 GITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNL 180
G+ N RP+ + V Q F G+ A S+ A+
Sbjct: 1509 GLF---NFRPSVRPVPLEVH---IQGFPGQHYCPRMA-----SMNKPTFQAIRSHSPAK- 1556
Query: 181 MVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQ-------EKEDLIEALKEENDGKLSTN 233
VLIF SS+ AL L F T+E KQ E E++I +++ +N
Sbjct: 1557 PVLIFVSSRRQTRLTALELI--AFLATEEDPKQWLNMDEREMENIIGTIRD-------SN 1607
Query: 234 LEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS-- 291
L+ + +G+ HHA L +R+ +EE ++ +Q++ TSTLA GVN PA VII+ +
Sbjct: 1608 LKLTLAFGIGMHHAGLHERDRKTVEELFVNCKIQVLIATSTLAWGVNFPAHLVIIKGTEY 1667
Query: 292 YVG--RDFISLNMYK--QMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISS 347
Y G R ++ + QM+GRAGR + G++++L ++ F P P+ S
Sbjct: 1668 YDGKTRRYVDFPITDVLQMMGRAGRPQFDDQGKAVILVHDIKK--DFYKKFLYEPFPVES 1725
Query: 348 HMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQ 384
+ L D + +A +S +D I T F++
Sbjct: 1726 SL-LGVLSDHLNAEIAGGTITSKQDAMDYITWTYFFR 1761
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 102/380 (26%), Positives = 177/380 (46%), Gaps = 56/380 (14%)
Query: 33 TKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEI-GLIVIDEFHMLNEPQRGPILECVVS 91
+K ++ + + + T EK + + + + +I L+++DE H+L+E RGP+LE +V+
Sbjct: 571 SKNEILRTQMLVTTPEKWDVVTRKSVGDVALSQIVKLLILDEVHLLHE-DRGPVLESIVA 629
Query: 92 KVLYLKKS----IQIFAMSATIGNINALSTFIE-----GITYVENS-RPTKHSEYVTVDK 141
+ L +S I+I +SAT+ N ++TF+ G+ + + RP
Sbjct: 630 RTLRQVESTQSMIRILGLSATLPNYLDVATFLHVNPCIGLFFFDGRFRPVP--------- 680
Query: 142 RVFQSFDG-KSLTEIYA-DNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRL 199
+ Q+F G KS ++ +N+D ++VL V+ V++F ++ A A+ L
Sbjct: 681 -LGQTFLGIKSANKVQQLNNMDEVCY----ESVLKQVKAGHQVMVFVHARNATVRTAMSL 735
Query: 200 --------QFDRFPGTK--EYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADL 249
Q F T+ EY EK+ K N + E G + HHA +
Sbjct: 736 IERAKNNGQICYFLPTQGPEYGHAEKQ----VQKSRN-----RQVRELFPDGFSIHHAGM 786
Query: 250 TAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS--YVGR--DFISLNMYK- 304
+R L+E + G ++++ CT+TLA GVNLPA VII+ + Y + F+ L +
Sbjct: 787 LRQDRNLVESLFSNGHIKVLVCTATLAWGVNLPAHAVIIKGTQIYAAKRGSFVDLGILDV 846
Query: 305 -QMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVA 363
Q+ GRAGR + GE I++ T D L + PI S +L D + +A
Sbjct: 847 MQIFGRAGRPQFDKFGEGIII--TTHDKLSHYLSLLTQQNPIESQF-LESLADNLNAEIA 903
Query: 364 ANLCSSLEDVKTLIKHTLFY 383
+++E+ I +T Y
Sbjct: 904 LGTVTNVEEAVKWISYTYLY 923
>gi|406605468|emb|CCH43112.1| pre-mRNA-splicing helicase BRR2 [Wickerhamomyces ciferrii]
Length = 2140
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 101/343 (29%), Positives = 165/343 (48%), Gaps = 36/343 (10%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V E+ + ++ E F +EE G TK+Q+++ + + T EK +
Sbjct: 540 LVQEQVREFSRRLEVFGIKVEELTGDSNL---TKQQISETQMLVTTPEKWDVITRKNSDT 596
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVL----YLKKSIQIFAMSATIGNINALS 116
+ + + L++IDE H+L++ +RGP+LE + ++ L Y + +++ +SAT+ N +S
Sbjct: 597 SYTNLVSLLIIDEIHLLHD-ERGPVLESITARTLRNVEYSGRDVRLVGLSATLPNYEDVS 655
Query: 117 TFI-----EGITYVENS-RPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPD 170
F+ EG+ Y + S RP + Q F G +TE + S+ + D
Sbjct: 656 RFLRVDEDEGLFYFDASYRPCP----------LAQQFIG--ITEKNSFKKTISMNEACYD 703
Query: 171 AVLHLVQGNLMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDL--IEALKEENDG 228
+L G V+IF S+ A L+ D+ + K D IE L++E++
Sbjct: 704 KILE-AAGKHQVIIFVHSRKDTFRTAKWLR-DKLLEEDKLNLFMKSDSASIEILRQESEK 761
Query: 229 KLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVII 288
T L E + G A HHA L +R E+ + G QI+ T+TLA GVNLPA VII
Sbjct: 762 VKDTGLAELLPTGFAIHHAGLARDDRSAAEDLFAEGYAQILVSTATLAWGVNLPAHTVII 821
Query: 289 RDSYV----GRDFISLNMYK--QMVGRAGRTGLQESGESIMLC 325
+ + V D+ L+ QM+GRAGR SGE I++
Sbjct: 822 KGTEVYAPDKGDWTQLSPQDILQMLGRAGRPRYDASGEGIIIT 864
>gi|156042175|ref|XP_001587645.1| hypothetical protein SS1G_11638 [Sclerotinia sclerotiorum 1980]
gi|154696021|gb|EDN95759.1| hypothetical protein SS1G_11638 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 1689
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/322 (27%), Positives = 155/322 (48%), Gaps = 39/322 (12%)
Query: 36 QLNKKSIYICTIEKGSKLIGSLIQENRIDE-IGLIVIDEFHMLNEPQRGPILECVVSKVL 94
++ SI I T EK + ++ + + L +IDE H+L + RG LE VVS++
Sbjct: 446 RVGSASIIITTPEKWDSITRKWTDYQKLLQLVKLFLIDEVHILKD-ARGATLEAVVSRMH 504
Query: 95 YLKKSIQIFAMSATIGNINALSTFI-----------EGITYVENSRPTKHSEYVTVDKRV 143
+ +++ A+SAT+ N + ++T++ T+ E RP K ++V
Sbjct: 505 SIGANVRFVALSATVPNSHDIATWLGRDSSSRQLPAHRETFGEEFRPVKLQKHV------ 558
Query: 144 FQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRLQFDR 203
++ ++ + LD + A++ +++FC ++ +C A L
Sbjct: 559 -HGYESRANDFAFEKILDGKIP-----ALIQKYSCKKPIMVFCFTRKSCEGTAAIL---- 608
Query: 204 FPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLA 263
+ + +Q D + +L+E + GVAYHHA L + +R IE AYL
Sbjct: 609 ---AEYWTRQRNVDRAWPAPTNRTVVGNKDLQELVGCGVAYHHAGLDSQDRSAIETAYLK 665
Query: 264 GTLQIICCTSTLAAGVNLPAQRVIIRDSYVGRD-----FISLNMYKQMVGRAGRTGLQES 318
G + +ICCTSTLA GVNLP Q V+++ + +D + L + QM+GRAGR +S
Sbjct: 666 GDISVICCTSTLAVGVNLPCQLVVLKGTVCFQDSGLVEYSDLEVM-QMLGRAGRPQFDDS 724
Query: 319 GESIMLCKTMQDFLRFSSMMNA 340
+I++ + M + R+ M++
Sbjct: 725 ATAIIMTR-MDNTDRYKKMISG 745
>gi|426234629|ref|XP_004011295.1| PREDICTED: activating signal cointegrator 1 complex subunit 3 [Ovis
aries]
Length = 2201
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 108/398 (27%), Positives = 185/398 (46%), Gaps = 53/398 (13%)
Query: 14 EEFKFYLEEYAGVK-----GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGL 68
+++K +EE G K G P + + K + + T EK + S N + ++ +
Sbjct: 1390 DDWKVRIEEKLGKKVIELTGDVTPDMKSIAKADLIVTTPEKWDGVSRSWQNRNYVKQVTI 1449
Query: 69 IVIDEFHMLNEPQRGPILECVVSKVLYL----KKSIQIFAMSATIGNINALSTFIE---- 120
++IDE H+L E +RGP+LE +VS+ ++ +K ++I +S + N L+ ++
Sbjct: 1450 LIIDEIHLLGE-ERGPVLEVIVSRTNFISSHTEKPVRIVGLSTALANARDLADWLNIRQM 1508
Query: 121 GITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNL 180
G+ N RP+ + V Q F G+ A S+ A+
Sbjct: 1509 GLF---NFRPSVRPVPLEVH---IQGFPGQHYCPRMA-----SMNKPTFQAIRSHSPAK- 1556
Query: 181 MVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQ-------EKEDLIEALKEENDGKLSTN 233
VLIF SS+ AL L F T+E KQ E E++I +++ +N
Sbjct: 1557 PVLIFVSSRRQTRLTALELI--AFLATEEDPKQWLNMDEREMENIIGTIRD-------SN 1607
Query: 234 LEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS-- 291
L+ + +G+ HHA L +R+ +EE ++ +Q++ TSTLA GVN PA VII+ +
Sbjct: 1608 LKLTLAFGIGMHHAGLHERDRKTVEELFVNCKIQVLIATSTLAWGVNFPAHLVIIKGTEY 1667
Query: 292 YVGR-----DFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPIS 346
Y G+ DF ++ QM+GRAGR + G++++L ++ F P P+
Sbjct: 1668 YDGKTRRYVDFPITDVL-QMMGRAGRPQFDDQGKAVILVHDIKK--DFYKKFLYEPFPVE 1724
Query: 347 SHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQ 384
S + L D + +A +S +D I T F++
Sbjct: 1725 SSL-LGVLSDHLNAEIAGGTITSKQDAMDYITWTYFFR 1761
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 101/380 (26%), Positives = 176/380 (46%), Gaps = 56/380 (14%)
Query: 33 TKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEI-GLIVIDEFHMLNEPQRGPILECVVS 91
+K ++ + + + T EK + + + + +I L+++DE H+L+E RGP+LE +V+
Sbjct: 571 SKNEILRTQMLVTTPEKWDVVTRKSVGDVALSQIVKLLILDEVHLLHE-DRGPVLESIVA 629
Query: 92 KVLYLKKS----IQIFAMSATIGNINALSTFIE-----GITYVENS-RPTKHSEYVTVDK 141
+ L +S I+I +SAT+ N ++TF+ G+ + + RP
Sbjct: 630 RTLRQVESTQSMIRILGLSATLPNYLDVATFLHVNPCIGLFFFDGRFRPVP--------- 680
Query: 142 RVFQSFDG-KSLTEIYA-DNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRL 199
+ Q+F G KS ++ +N+D ++VL V+ V++F ++ A A+ L
Sbjct: 681 -LGQTFLGVKSANKVQQLNNMDEVCY----ESVLKQVKAGHQVMVFVHARNATVRTAMSL 735
Query: 200 --------QFDRFPGTK--EYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADL 249
F T+ EY EK+ K N + E G + HHA +
Sbjct: 736 IERAKNNGHISYFLPTQGPEYGHAEKQ----VQKSRN-----RQVRELFPDGFSIHHAGM 786
Query: 250 TAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS--YVGR--DFISLNMYK- 304
+R L+E + G ++++ CT+TLA GVNLPA VII+ + Y + F+ L +
Sbjct: 787 LRQDRNLVESLFSNGHIKVLVCTATLAWGVNLPAHAVIIKGTQIYAAKRGSFVDLGILDV 846
Query: 305 -QMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVA 363
Q+ GRAGR + GE I++ T D L + PI S +L D + +A
Sbjct: 847 MQIFGRAGRPQFDKFGEGIII--TTHDKLSHYLSLLTQQNPIESQF-LESLADNLNAEIA 903
Query: 364 ANLCSSLEDVKTLIKHTLFY 383
+++E+ I +T Y
Sbjct: 904 LGTVTNVEEAVKWISYTYLY 923
>gi|225457229|ref|XP_002284129.1| PREDICTED: activating signal cointegrator 1 complex subunit 3 [Vitis
vinifera]
gi|297733882|emb|CBI15129.3| unnamed protein product [Vitis vinifera]
Length = 2093
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 109/402 (27%), Positives = 183/402 (45%), Gaps = 32/402 (7%)
Query: 21 EEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEP 80
+E + G Y P L I I T EK + + + ++GL+++DE H+L
Sbjct: 1364 KEMVEMTGDYTPDLMALMSADIIISTPEKWDGISRNWHNRGYVKKVGLMILDEIHLLGA- 1422
Query: 81 QRGPILECVVSKVLYL----KKSIQIFAMSATIGNINALSTFIE-GITYVENSRPTKHSE 135
RGPILE +VS++ Y+ +++++ +S + N L+ ++ G + N +P+
Sbjct: 1423 DRGPILEVIVSRMRYISSQTERTVRFVGLSTALANAGDLADWLGVGEIGLFNFKPSVRPV 1482
Query: 136 YVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLM--VLIFCSSKIACS 193
+ V Q + GK Y ++ A + + M VLIF SS+
Sbjct: 1483 PLEVH---IQGYPGK----FYCPRMN----SMNKPAYAAICTHSPMKPVLIFVSSRRQTR 1531
Query: 194 NLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGE 253
AL L +F + E+ +Q EAL+ NL + +G+ HHA L +
Sbjct: 1532 LTALDLI--QFAASDEHPRQFLSMPEEALQMVLSQVTDQNLRHTLQFGIGLHHAGLNDKD 1589
Query: 254 RRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS--YVGR-----DFISLNMYKQM 306
R L+EE + +Q++ CTSTLA GVNLPA VII+ + Y G+ DF ++ QM
Sbjct: 1590 RSLVEELFSNNKIQVLVCTSTLAWGVNLPAHLVIIKGTEFYDGKAKRYVDFPITDIL-QM 1648
Query: 307 VGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAANL 366
+GRAGR + G++++L + F P P+ S + + E+V+ +
Sbjct: 1649 MGRAGRPQYDQHGKAVILVHEPKK--SFYKKFLYEPFPVESSLREHFHDHINAEIVSGTI 1706
Query: 367 CSSLEDVKTLIKHTLFYQLKSPEDQQTFLETTLSEIVASLLA 408
C ED + T ++ L+ T EI++S L+
Sbjct: 1707 CHK-EDAMHYLTWTYLFRRLMVNPAYYGLDDTDPEILSSYLS 1747
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 85/281 (30%), Positives = 139/281 (49%), Gaps = 38/281 (13%)
Query: 66 IGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKS----IQIFAMSATIGNINALSTFIE- 120
+ L++IDE H+LN+ RG ++E +V++ L +S I+I +SAT+ N ++ F+
Sbjct: 568 VKLLIIDEVHLLND-DRGAVIEALVARTLRQVESTQTMIRIVGLSATLPNYLEVAQFLRV 626
Query: 121 ----GITYVENS-RPTK-HSEYVTVDKRVFQSFDGKS--LTEIYADNLDYSLTGSGPDAV 172
G+ Y ++S RP +Y+ + + Q+F ++ L EI + + V
Sbjct: 627 NPEAGLFYFDSSYRPVPLAQQYIGISE---QNFLARTELLNEICYNKV-----------V 672
Query: 173 LHLVQGNLMVLIFCSSKIACSNLALRL-QFDRFPGTKEYKKQEKEDLIEALKEENDGKLS 231
L QG+ ++F S+ + A +L + R E K E +K E +
Sbjct: 673 DSLRQGH-QAMVFVHSRKDTAKTAEKLIELARRNDDVELFKNETHPQFSLVKMEVMKSRN 731
Query: 232 TNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIR-- 289
+L E GV HHA + +R L E + G L+++ CT+TLA GVNLPA V+I+
Sbjct: 732 KDLVEYFGSGVGIHHAGMLRADRGLTERLFSDGLLKVLVCTATLAWGVNLPAHTVVIKGT 791
Query: 290 ---DSYVG--RDFISLNMYKQMVGRAGRTGLQESGESIMLC 325
D G RD L++ Q+ GRAGR +SGE I++
Sbjct: 792 QLYDPKAGGWRDLGMLDVM-QIFGRAGRPQFDKSGEGIIIT 831
>gi|401625970|gb|EJS43942.1| brr2p [Saccharomyces arboricola H-6]
Length = 2160
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 108/387 (27%), Positives = 187/387 (48%), Gaps = 40/387 (10%)
Query: 24 AGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRG 83
A + G +++Q+ + I + T EK ++ ++ + L++IDE H+L++ +RG
Sbjct: 585 AELTGDSRLSRKQIEETQILVSTPEKWDITTRNIKNLALVELVRLLIIDEIHLLHD-ERG 643
Query: 84 PILECVVSKVL----YLKKSIQIFAMSATIGNINALSTFI----EGITYVENS-RPTKHS 134
P+LE +V++ Y +K+ +I +SAT+ N + F+ EG+ Y ++S RP S
Sbjct: 644 PVLESIVARTFWASKYSQKNPRIIGLSATLPNYQDVGRFLRVPAEGLFYFDSSFRPCPLS 703
Query: 135 E-YVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACS 193
+ + + +R SL ++ A + + + VL + +++F S+ S
Sbjct: 704 QQFCGIKER-------NSLKKLKA------MNDACYEKVLESINEGNQIIVFVHSRKETS 750
Query: 194 NLALRLQFDRFPGTKEYKKQEKEDL--IEALKEENDGKLSTNLEECILYGVAYHHADLTA 251
A L+ ++F K K D + LK E + +L + + G+ HHA L
Sbjct: 751 RTATWLK-NKFIEENLAHKLTKNDAGSKQILKTEAANIIDPSLRKLVEGGIGTHHAGLAR 809
Query: 252 GERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYV------GRDFISLNMYKQ 305
+R L E+ + G LQ++ CT+TLA GVNLPA VII+ + V + +S Q
Sbjct: 810 NDRSLSEDLFADGLLQVLVCTATLAWGVNLPAHTVIIKGTDVYSPEKGSWEQLSPQDVLQ 869
Query: 306 MVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAAN 365
M+GRAGR GE +++ + + S++N PI S + +L EVVA N
Sbjct: 870 MLGRAGRPRYDTFGEGVIITD-QSNIQYYLSVLNQQL-PIESQFVSKLVDNLNAEVVAGN 927
Query: 366 L-CSSLEDVKTLIKHTLFY--QLKSPE 389
+ C +D + +T Y L SPE
Sbjct: 928 IKCR--KDAVNWLAYTYLYVRMLASPE 952
>gi|242019028|ref|XP_002429968.1| U520, putative [Pediculus humanus corporis]
gi|212515023|gb|EEB17230.1| U520, putative [Pediculus humanus corporis]
Length = 2114
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 115/463 (24%), Positives = 218/463 (47%), Gaps = 59/463 (12%)
Query: 28 GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILE 87
G + ++Q+ I +CT EK + + + LI+IDE H+L++ +RGP+LE
Sbjct: 564 GDHQLNRQQIQSTHIIVCTPEKWDIITRKGGDKTFTQLVRLIIIDEIHLLHD-ERGPVLE 622
Query: 88 CVVS----KVLYLKKSIQIFAMSATIGNINALSTFIE-----GITYVENS-RPTK-HSEY 136
+V+ K+ ++ +++ +SAT+ N ++TF+ G+ Y +NS RP +Y
Sbjct: 623 ALVARTIRKIEAAQEDVRLVGLSATLPNYQDVATFLRVKTETGLFYFDNSFRPVALEQQY 682
Query: 137 VTV-DKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNL 195
+ V +K+ + F + + EI + + + H + ++V + + +
Sbjct: 683 IGVTEKKALKRF--QVMNEIVYEKV-----------MEHAGRNQVLVFVHSRKETGKTAR 729
Query: 196 ALR---LQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAG 252
A+R L+ D T +E +E L+ E + ++ L++ + YG A HHA +T
Sbjct: 730 AIRDMCLEKD----TLGQFLREGSASMEVLRTEAEQVKNSELKDLLPYGFAIHHAGMTRV 785
Query: 253 ERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYV-----GRDFISLNMYK--Q 305
+R L+E+ + +Q++ T+TLA GVNLPA VII+ + V GR ++ L Q
Sbjct: 786 DRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQVYNPEKGR-WVELGALDVLQ 844
Query: 306 MVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAAN 365
M+GRAGR GE I++ + + S++N PI S + + D++ +
Sbjct: 845 MLGRAGRPQYDTKGEGILIT-NHSELQYYLSLLNQQL-PIESQL-VGKIPDMLNAEIVLG 901
Query: 366 LCSSLEDVKTLIKHTLFY--QLKSPE---------DQQTFLETTLSEIV---ASLLASKG 411
++ D T + +T Y L+SP + LE+ ++++ A L G
Sbjct: 902 TIQTVRDAVTWLGYTYLYIRMLRSPTLYGISHDHLKEDPLLESFRADLIHTAALQLDRSG 961
Query: 412 TMLTMNEAGHLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLN 454
+ + GH +T + + +H+ + +Y+ LL L+
Sbjct: 962 LIKYDRKTGHFQVTELGRICSHYYCTHE-TMAVYNQLLKPTLS 1003
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 88/346 (25%), Positives = 153/346 (44%), Gaps = 67/346 (19%)
Query: 37 LNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLY- 95
L K I I T EK L Q + I L ++DE ++ + GP+LE V S++ Y
Sbjct: 1412 LAKGQIIITTAEKWDVLSRRWKQRKNVQNIQLFIVDELQLIG-GEDGPVLEVVCSRMRYI 1470
Query: 96 ---LKKSIQIFAMSATIGNINALSTFI-----EGITYVENSRPTKHSEYVTVDKRVFQSF 147
L+K I+I A+S ++ + +S ++ + + RP
Sbjct: 1471 SSQLEKQIRIVALSTSLADARDVSQWLGCNSNATFNFHPSVRPVP--------------- 1515
Query: 148 DGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLM-------VLIFCSSKIACSNLALRL- 199
E++ + + S A+ V N+M V++F ++ A+ L
Sbjct: 1516 -----LELHVQGFNITHNASRLIAMSKPVFNNIMKHSSHKPVIVFVPTRKQARITAISLL 1570
Query: 200 -------QFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAG 252
Q +RF E+ED+ L+ +D L+E ++ GVAY H LT
Sbjct: 1571 TFAAAESQPNRF------FHAEEEDIQPFLERMSD----KTLKETLIQGVAYIHEGLTPN 1620
Query: 253 ERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS--YVGR-----DFISLNMYKQ 305
+ RL+E+ + +G +QI T L G+N+ A VII D+ Y G+ D+ ++ Q
Sbjct: 1621 DHRLVEQLFDSGAVQIAVVTRNLCWGLNIQAHLVIIMDTQFYNGKIHAYEDYPVTDVL-Q 1679
Query: 306 MVGRAGRTGLQESGESIMLCK-TMQDFLRFSSMMNAGPEPISSHMD 350
M+G+A R + + +++C+ + +DF F +N P+ SH+D
Sbjct: 1680 MIGKANRPLEDDDAKCVLMCQSSKKDF--FKKFLNESL-PVESHLD 1722
>gi|84998946|ref|XP_954194.1| DEAD-box helicase [Theileria annulata]
gi|65305192|emb|CAI73517.1| DEAD-box helicase, putative [Theileria annulata]
Length = 1925
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 95/354 (26%), Positives = 165/354 (46%), Gaps = 60/354 (16%)
Query: 26 VKGQYPPTKRQLNKKSIYICTIEK------GSKLIGSLIQENRIDEIGLIVIDEFHMLNE 79
V G + K +L + I + T EK S + ++ + + LI+ DE H+LN+
Sbjct: 354 VTGDFQVPKSELEEIDILVTTPEKCDVVTRNSFSTATQSDDSFLTRVNLIIFDEIHLLND 413
Query: 80 PQRGPILECVVSKVLYLKKSIQI----FAMSATIGNINALSTFIEGITYVENSRPTKHSE 135
+RGP++E + ++ L + Q+ MSAT+ N ++TF+ P +H+
Sbjct: 414 -ERGPVIETIAARFFRLIEWTQVTRRVVGMSATLPNYEDIATFLR--------VPPEHTY 464
Query: 136 YVTVDKR---VFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIAC 192
Y + R + Q F G +IY +N+ D ++ ++ ++F S+
Sbjct: 465 YFGREYRHVPLQQIFYGIKNDDIYKNNMLMICF----DHIVETLESGKQCMVFVHSRNET 520
Query: 193 SNLALRLQFDRFPGTKEYKKQEKEDLIEA-----------LKEENDGKLSTNLEECILYG 241
A R+ + K EK +L E L N+ KL ++ Y
Sbjct: 521 FTTASRI-------VELVNKSEKSELFEPDLSQVKRFSAQLMRRNNLKLLSD------YS 567
Query: 242 VAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGRDFISLN 301
++ HHA L+ +R L+EE + +G ++++ CTSTLA GVNLPA VII+ +++G + N
Sbjct: 568 ISIHHAGLSKSDRDLVEEMFKSGLIKVLVCTSTLAWGVNLPAHSVIIKGTFIGGVGVDRN 627
Query: 302 M----YKQMVGRAGRTGLQESGESIMLC--KTMQDFLRFSSMMNAGPEPISSHM 349
+ Q++GRAGR G+ I+L K + +++R M PI S +
Sbjct: 628 INNLELNQIMGRAGRPQFDVEGKGILLTDHKNLYNYVR----MQTERVPIESQL 677
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 95/338 (28%), Positives = 159/338 (47%), Gaps = 58/338 (17%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQ------YPPTKRQLNKKSIYICTIEKGSKLI 54
+ HE+++ K FK L+ Y + +L++ I I T EK +
Sbjct: 1188 LAHERFKDWCKKLH-FKKILQLTGDTSSNNLDNQLYKFERDELDRYDIVITTPEKWDGIS 1246
Query: 55 GSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKS----IQIFAMSATIG 110
++ + ++ LI++DE H+L E RG I+E ++S+ + S ++ +S ++
Sbjct: 1247 RHWRRKKLVTKVALIILDELHLLGE-SRGAIIESIISRQYTINHSTGAQVRYICLSTSLS 1305
Query: 111 NINALSTFIEGITYVEN----SRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTG 166
N+N +S +I GI V N RP K + Y+ DG S+ + Y ++ S+
Sbjct: 1306 NLNEISEWI-GIPNVYNFSPAVRPVKCNLYI----------DGFSI-KAYCPRMN-SMNK 1352
Query: 167 SGPDAVL-HLVQGNLMVLIFCSSK----IACSNLALRLQFDRFPGTKEYKKQEKEDLIEA 221
D ++ H N VLIF SS+ + +L LQF + +D
Sbjct: 1353 PCFDTIIKHDHSSN--VLIFVSSRRQTRMTAQDLVGLLQFHNISFSNSCDNYFFDD---- 1406
Query: 222 LKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNL 281
L + +G+ HHA L+ +R L+++ +L G L+++ TSTLA GVNL
Sbjct: 1407 ----------EWLNTFVPHGIGIHHAGLSTKDRELVQDLFLNGKLKVLIATSTLAWGVNL 1456
Query: 282 PAQRVIIRDS--YVGR-----DFISLNMYKQMVGRAGR 312
PA+ VII+ + Y GR D+ + ++ QMVGRAGR
Sbjct: 1457 PAKIVIIKGTEFYDGRVKKYIDYSATDII-QMVGRAGR 1493
>gi|401417517|ref|XP_003873251.1| putative RNA helicase [Leishmania mexicana MHOM/GT/2001/U1103]
gi|322489480|emb|CBZ24738.1| putative RNA helicase [Leishmania mexicana MHOM/GT/2001/U1103]
Length = 1985
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 102/372 (27%), Positives = 174/372 (46%), Gaps = 36/372 (9%)
Query: 33 TKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSK 92
TKR+L + + + T EK + E + ++ LI++DE H+LNE +RGP+LE +V++
Sbjct: 373 TKRELAETQVIVTTPEKWDVITRKQSNEELVRQVRLIIMDEIHLLNE-ERGPVLEALVAR 431
Query: 93 VLY-----LKKSIQIFAMSATIGNINALSTFI-----EGI-TYVENSRPTKHSEYVTVDK 141
L ++ +++ +SAT+ N ++ F+ EG+ + RP
Sbjct: 432 TLRHGELNPEQRVRLVGLSATLPNYKDVANFLQADLREGLKVFGPEYRPVP--------- 482
Query: 142 RVFQSFDG-KSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRLQ 200
+ Q+F G ++ + N ++ L + V+ V+ V++F S+ LA
Sbjct: 483 -LEQTFIGLQNTSGAPKRNKEFELDRLAYEEVVKNVREGHQVMVFVHSRKQTVGLAKYFI 541
Query: 201 FDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEA 260
+ +E+ Q K + ++++ +L G HHA L +R E
Sbjct: 542 EESTHRGEEHLFQYKGVMPSGIEKKGRTLQGRDLASLFAAGFGAHHAGLVRYDRTTTEGF 601
Query: 261 YLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYV------GRDFISLNMYKQMVGRAGRTG 314
+ G L+++CCTSTLA GVNLPA V+IR + + G IS+ Q+ GRAGR
Sbjct: 602 FRDGYLRVLCCTSTLAWGVNLPAHTVVIRGTQMYDPKRGGLVSISVLDVMQIFGRAGRPQ 661
Query: 315 LQESGESIMLC--KTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAANLCSSLED 372
SG I++ K + FLR + A PI S M L D + V A SS+ +
Sbjct: 662 FDTSGHGIIISDDKEVSHFLR----LIAHALPIESQMQ-GKLCDHLNAEVNAGTISSVME 716
Query: 373 VKTLIKHTLFYQ 384
+ +++T +Q
Sbjct: 717 ASSWLEYTYMWQ 728
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 107/408 (26%), Positives = 174/408 (42%), Gaps = 45/408 (11%)
Query: 26 VKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPI 85
+ G P L K I T EK + + + + + L+V DE HML RGPI
Sbjct: 1228 LSGDATPDISALAKADILCTTPEKWDGISRNWQVRSYVTAVKLVVFDEVHMLGT-DRGPI 1286
Query: 86 LECVVSKVLY----LKKSIQIFAMSATIGNINALSTF--IEGITYVENSRPTKHSEYVTV 139
LE +VS++ Y LK I++ +S + N LS++ +E V N P+ +TV
Sbjct: 1287 LEVIVSRMRYIGWNLKAPIRLVGLSTAVSNPGDLSSWLGVEKKWAVFNFDPSVRPVPMTV 1346
Query: 140 DKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRL 199
+ GK+ A ++ +A+ V++F SS+ A+ L
Sbjct: 1347 H---IAGYHGKNYCPRMA-----TMNKPTYNAICE-KSPTQPVIVFVSSRRQTRLTAMAL 1397
Query: 200 -QFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIE 258
F G D ++ + D ++ C+ +GV HHA L +R ++E
Sbjct: 1398 IGFLLMEGNTAKWVHMNVDQVQEYTSKLDDPY---VKHCLQFGVGIHHAGLLESDRTIVE 1454
Query: 259 EAYLAGTLQIICCTSTLAAGVNLPAQRVIIR---------DSYVGRDFISLNMYKQMVGR 309
E +L +Q++ TSTLA GVN PA V+++ +SYV DF ++ QM+GR
Sbjct: 1455 ETFLTNRIQVLVATSTLAWGVNFPAHMVVVKGTEYYDAKTNSYV--DFPITDVL-QMIGR 1511
Query: 310 AGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAANLCSS 369
AGR G + +LC + F P P+ S + V + E+V+ + +
Sbjct: 1512 AGRPQFDTEGVAQVLCHEPKK--GFYRKFLYDPFPVESALHKQLHVHINAEIVSGTINTR 1569
Query: 370 LEDVKTLIKHTLFYQLK-----------SPEDQQTFLETTLSEIVASL 406
+ V L LF ++ SP+ FL T + ++A L
Sbjct: 1570 QDAVNYLTWTYLFRRIARNPSYYGLEDGSPKAVTIFLSTLVKGVLADL 1617
>gi|344264072|ref|XP_003404118.1| PREDICTED: activating signal cointegrator 1 complex subunit 3
[Loxodonta africana]
Length = 1704
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 107/397 (26%), Positives = 183/397 (46%), Gaps = 51/397 (12%)
Query: 14 EEFKFYLEEYAGVK-----GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGL 68
+++K +EE G K G P + + K + + T EK + S N + ++ +
Sbjct: 892 DDWKVRIEEKLGKKVVELTGDVTPDMKSIAKADLIVTTPEKWDGVSRSWQNRNYVQQVTI 951
Query: 69 IVIDEFHMLNEPQRGPILECVVSKVLYL----KKSIQIFAMSATIGNINALSTFIE---- 120
++IDE H+L + +RGP+LE +VS+ ++ +K ++I +S + N L+ ++
Sbjct: 952 LIIDEIHLLGD-ERGPVLEVIVSRTNFISSHTEKPVRIVGLSTALANARDLADWLNIKEM 1010
Query: 121 GITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNL 180
G+ N RP+ + V Q F G+ A S+ A+
Sbjct: 1011 GLF---NFRPSVRPVPLEVH---IQGFPGQHYCPRMA-----SMNKPTFQAIRSHSPAK- 1058
Query: 181 MVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQ-------EKEDLIEALKEENDGKLSTN 233
VLIF SS+ AL L F T+E KQ E E +I L++ +N
Sbjct: 1059 PVLIFVSSRRQTRLTALELI--AFLATEEDPKQWLNMDEREMESIIGTLRD-------SN 1109
Query: 234 LEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS-- 291
L+ + +G+ HHA L +R+ +EE ++ +Q++ TSTLA GVN PA VII+ +
Sbjct: 1110 LKLTLAFGIGMHHAGLHERDRKTVEELFVNCKVQVLIATSTLAWGVNFPAHLVIIKGTEY 1169
Query: 292 YVG--RDFISLNMYK--QMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISS 347
Y G R ++ + QM+GRAGR + G++++L ++ F P P+ S
Sbjct: 1170 YDGKTRRYVDFPITDVLQMMGRAGRPQFDDQGKAVILVHDIKK--DFYKKFLYEPFPVES 1227
Query: 348 HMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQ 384
+ L D + +A +S +D I T F++
Sbjct: 1228 SL-LEVLSDHLNAEIAGGTITSKQDAMDYITWTYFFR 1263
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 101/379 (26%), Positives = 171/379 (45%), Gaps = 62/379 (16%)
Query: 37 LNKKSIYICTIEKGSKLIGSLIQENRIDEI-GLIVIDEFHMLNEPQRGPILECVVSKVLY 95
L S+ + T EK + + + + +I L+++DE H+L+E RGP+LE +V++ L
Sbjct: 77 LRDSSMLVTTPEKWDVMTRKSVGDVALSQIVRLLILDEVHLLHE-DRGPVLESIVARTLR 135
Query: 96 LKKS----IQIFAMSATIGNINALSTFIE-----GITYVENS-RPTKHSEYVTVDKRVFQ 145
+S I+I +SAT+ N ++ F+ G+ Y + RP + Q
Sbjct: 136 QVESTQSMIRILGLSATLPNYLDVAMFLHVNPHIGLFYFDGRFRPVP----------LGQ 185
Query: 146 SFDG-KSLTEIYA-DNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRL---- 199
+F G KS + +N+D + ++VL V+ V++F ++ A A+ L
Sbjct: 186 TFLGVKSANKAQQLNNMDEACY----ESVLKQVKAGHQVMVFVHARNATVRTAMSLIERA 241
Query: 200 ----QFDRFPGTK--EYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGE 253
Q F T+ EY E++ + N + E G + HHA + +
Sbjct: 242 KNNGQIPFFLPTQGPEYGHAERQ----VQRSRN-----KQVRELFADGFSIHHAGMLRQD 292
Query: 254 RRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVII---------RDSYVGRDFISLNMYK 304
R L+E + G ++++ CT+TLA GVNLPA V+I R SYV + +
Sbjct: 293 RNLVENLFSNGHIKVLVCTATLAWGVNLPAHAVVIKGTQVYAAKRGSYVDLGILDV---M 349
Query: 305 QMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAA 364
Q+ GRAGR + GE I++ T D L + PI S +L D + +A
Sbjct: 350 QIFGRAGRPQFDKFGEGIII--TTHDKLSHYLTLLTQQNPIESQF-LESLADNLNAEIAL 406
Query: 365 NLCSSLEDVKTLIKHTLFY 383
+++E+ I +T Y
Sbjct: 407 GTVTNVEEAVKWISYTYLY 425
>gi|254578944|ref|XP_002495458.1| ZYRO0B11858p [Zygosaccharomyces rouxii]
gi|238938348|emb|CAR26525.1| ZYRO0B11858p [Zygosaccharomyces rouxii]
Length = 2155
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 118/448 (26%), Positives = 209/448 (46%), Gaps = 48/448 (10%)
Query: 23 YAGVK-----GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHML 77
Y G+K G ++QL + + I T EK + + + + + L++IDE H+L
Sbjct: 581 YLGIKVVELTGDSNLNRQQLLEAQVLISTPEKWDVITRKADESSFVQSVRLMIIDEIHLL 640
Query: 78 NEPQRGPILECVVSKVLYLK---KSIQIFAMSATIGNINALSTFIE----GITYVENS-R 129
++ RGP++E +VS+ L K + ++ +SAT+ N +S F+ G+ Y +++ R
Sbjct: 641 HDA-RGPVIEAIVSRALQAKTFQEPPRLLGLSATLPNYQDVSRFLRVPDNGLFYFDSTYR 699
Query: 130 PTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSK 189
P S Q F G +TE + ++ + + L V+ V+IF S+
Sbjct: 700 PCPLS----------QQFCG--VTEKSSLKKLNAMNETCHEKTLEAVKQGHQVIIFVHSR 747
Query: 190 IACSNLALRLQFDRFPGTKEYKKQEKEDLIEA--LKEENDGKLSTNLEECILYGVAYHHA 247
+ AL L ++F K D L+ E++ L++ I G+ HHA
Sbjct: 748 KETARTALWL-MEKFSENDNLGLIRKSDPASGKILETESENVQDGQLKKIIRAGIGIHHA 806
Query: 248 DLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYV------GRDFISLN 301
LT +R L E+ + G LQ++ T+TLA GVNLPA VI++ + V + +S
Sbjct: 807 GLTKTDRSLSEDLFADGLLQVLVSTATLAWGVNLPAHTVIVKGTDVYSPESGSWEPLSPQ 866
Query: 302 MYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEV 361
QM+GRAGR +GE I++ T Q ++F + PI S + + +L EV
Sbjct: 867 DLLQMLGRAGRPRYDTTGEGIII--TNQTDVQFYLAVLNQQLPIESQLVSKIVDNLNAEV 924
Query: 362 VAANLCSSLEDVKTLIKHTLF---------YQLKSPEDQQTFLETTLSEIVASL--LASK 410
VA N+ + V L L+ Y++ PE +++ L+ + I ++L L +
Sbjct: 925 VAGNIQNRKHGVDWLTYTYLYVRMLMSPEIYKVPDPEKEESTLKYGEALIHSALAILHEE 984
Query: 411 GTMLTMNEAGHLSLTSIAKAAVQAGLSH 438
++ E+G + T + + + ++H
Sbjct: 985 NLVVYDAESGDVEATELGRISSYFYINH 1012
Score = 48.5 bits (114), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 97/210 (46%), Gaps = 16/210 (7%)
Query: 182 VLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYG 241
+LIF S+ +C + +L F + + E+EDL LK DG L +L +G
Sbjct: 1579 ILIFSPSRKSCIDSSLIFIQYAFENNLDLLRAEEEDLNSYLKAVTDGALKKSL----THG 1634
Query: 242 VAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS--YVGRDF-- 297
+ +A++ A +R ++++ Y G L I+ T P+ RV+I + Y G++
Sbjct: 1635 IGMIYAEMNAKDRAVVKKLYDYGALSILLVTKDCCHDCP-PSNRVVILGTQYYEGKEHRY 1693
Query: 298 --ISLNMYKQMVGRA-GRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTL 354
S N +MV G+T + ++ + M+D+ + ++ G PI S M L
Sbjct: 1694 VDYSANQLLEMVNTTKGKTKDDTTQALVLTNQKMKDY--YKKFLSEGL-PIESFM-FFHL 1749
Query: 355 VDLILEVVAANLCSSLEDVKTLIKHTLFYQ 384
D ++ + ++ + +D I +T FY+
Sbjct: 1750 YDALISEINTSVIQTKQDCVDWIAYTFFYR 1779
>gi|336388941|gb|EGO30085.1| putative RNA helicase [Serpula lacrymans var. lacrymans S7.9]
Length = 2164
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 106/384 (27%), Positives = 188/384 (48%), Gaps = 54/384 (14%)
Query: 33 TKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSK 92
TK+Q+++ I + T EK + + + + LI+IDE H+L++ +RGP+LE +V++
Sbjct: 593 TKQQISETQIIVTTPEKWDVITRKSTDTSYTNIVRLIIIDEIHLLHD-ERGPVLESIVAR 651
Query: 93 VL----YLKKSIQIFAMSATIGNINALSTFI-----EGITYVENS-RPTK-HSEYVTV-D 140
+ + +++ +SAT+ N ++TF+ +G+ Y + S RP +++ V +
Sbjct: 652 TIRRMEQTSEYVRLVGLSATLPNYQDVATFLRVDESKGLFYFDASYRPCGLQQQFIGVTE 711
Query: 141 KRVFQSFDGKSLTEI-YADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRL 199
K+ + + + + E+ Y LD + G L+F S+ + A
Sbjct: 712 KKAIKRY--QVMNEVCYDKVLDQA--------------GKNQTLVFVHSRKETAKTA--- 752
Query: 200 QFDRFPGTKEYKKQEKEDLI-------EALKEENDGKLSTNLEECILYGVAYHHADLTAG 252
+F +K+ + E L EE + NL++ + +G A HHA +T
Sbjct: 753 ---KFIRDMAIEKETITQFVRPDSATREILNEEANNVKDGNLKDLLPFGFAIHHAGMTRE 809
Query: 253 ERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYV-----GRDFISLNMYK--Q 305
+R L+EE + G +Q++ CT+TLA GVNLPA VII+ + + GR ++ L+ Q
Sbjct: 810 DRGLVEELFADGAVQVLVCTATLAWGVNLPAHTVIIKGTQIYNPEKGR-WVELSSQDVLQ 868
Query: 306 MVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAAN 365
M+GRAGR GE I++ + + S+MN PI S + +L E+V
Sbjct: 869 MLGRAGRPQYDTYGEGIIIT-NHSELQYYLSLMNQQ-LPIESQFVSKLVDNLNAEIVLGT 926
Query: 366 LCSSLEDVKTLIKHTLFYQ-LKSP 388
+ + E V+ L L+ + LKSP
Sbjct: 927 VRNRDEAVQWLGYSYLYVRMLKSP 950
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 89/392 (22%), Positives = 162/392 (41%), Gaps = 59/392 (15%)
Query: 21 EEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEP 80
+E + G+ R L K + ICT + L Q + IGL++ DE ++
Sbjct: 1417 KEIVSLTGETSADLRLLEKGDVIICTPSQWDVLSRRWRQRKNVQNIGLLIADEVQLVGG- 1475
Query: 81 QRGPILECVVSKVLYLKKSIQI----FAMSATIGNINALSTFIEG-----ITYVENSRPT 131
+ GP E V+S+ Y+ +I A S ++ N L ++ + +SRP
Sbjct: 1476 EVGPTYEVVISRTRYVSAQTEIKTRIVACSVSLANARDLGEWMGAPSHAIFNFSPSSRPL 1535
Query: 132 K---HSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSS 188
H + T+ F S Y ++Y+ T V++F S
Sbjct: 1536 DMDIHLQSFTIPH--FPSLMIAMSKPAYLAIVEYAPTKP--------------VIVFVPS 1579
Query: 189 KIAC--------SNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILY 240
+ C ++ A + DRF +E +AL+ D + L E + +
Sbjct: 1580 RRQCRLTVDDILTHCAADEKGDRFLNIEE----------DALQPHLDHISDSGLAETLKH 1629
Query: 241 GVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIR--DSYVGR--- 295
GV Y+H L ++R++E + +G +Q++ + A + + + VII Y G+
Sbjct: 1630 GVGYYHEALDKQDKRIVERLFQSGAIQVLVASKDTAWSLPVASYMVIIMGVQYYEGKEHR 1689
Query: 296 --DFISLNMYKQMVGRAGRTGLQESGESIMLC-KTMQDFLRFSSMMNAGPEPISSHMDPP 352
D+ +++ QM+GRA R + +++C +T +DF + + G PI SH+
Sbjct: 1690 YADYPVMDVL-QMMGRACRPMEDDRSRCVLMCQQTRKDF--YKKFLAEG-LPIESHLPTH 1745
Query: 353 TLVDLILEVVAANLCSSLEDVKTLIKHTLFYQ 384
L D L +A + +D ++ T FY+
Sbjct: 1746 LLHDYFLAEIAVKTIENKQDAMDILTWTYFYR 1777
>gi|302925686|ref|XP_003054144.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256735085|gb|EEU48431.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 2224
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 120/466 (25%), Positives = 219/466 (46%), Gaps = 58/466 (12%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V E+ +L E + + E G + TK+Q+ + I + T EK +
Sbjct: 592 LVQEQVGNLGNRLEPYGIRVSELTGDRQL---TKQQIAETQIIVTTPEKWDVITRKSNDL 648
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVL----YLKKSIQIFAMSATIGNINALS 116
+ + LI+IDE H+L++ RGP+LE +VS+ + + ++I +SAT+ N ++
Sbjct: 649 TYTNLVRLIIIDEIHLLHD-DRGPVLESIVSRTIRKTEQTGEPVRIIGLSATLPNYRDVA 707
Query: 117 TFI-----EGITYVENS-RPTK-HSEYVTV-DKRVFQSFDGKSLTEIYADNLDYSLTGSG 168
+F+ +G+ + + S RP E+V V D++ + K++ ++ + +
Sbjct: 708 SFLRVDTKKGLFHFDGSFRPCPLRQEFVGVTDRKAIKQL--KTMNDVCYNKV-------- 757
Query: 169 PDAVLHLVQGNLMVLIFCSSKIACSNLA--LR---LQFDRFPGTKEYKKQEKEDLIEALK 223
+ H+ +LIF S+ + A +R L+ D + +E L EA
Sbjct: 758 ---IEHVGTNRNQMLIFVHSRKETAKTARYIRDKALEMDTINQILRHDAGSREVLNEASS 814
Query: 224 EENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPA 283
+ D +L++ + YG HHA ++ +R +E+ + G +Q++ CT+TLA GVNLPA
Sbjct: 815 QATD----KDLKDILPYGFGIHHAGMSRIDRTDVEDLFARGAIQVLVCTATLAWGVNLPA 870
Query: 284 QRVIIRDSYV----GRDFISLNMYK--QMVGRAGRTGLQESGESIMLCKTMQDFLRFSSM 337
V+I+ + V ++ L+ QM+GRAGR GE I++ T + + S+
Sbjct: 871 HTVVIKGTQVYSPEKGSWVELSPQDVLQMLGRAGRPQYDTYGEGIIIT-TQSEMQYYLSL 929
Query: 338 MNAGPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQ-LKSP-------- 388
+N PI S + +L EVV N+ + E V+ L LF + L+SP
Sbjct: 930 LNQQ-LPIESQFVSKLVDNLNAEVVLGNVRTRDEGVEWLGYTYLFVRMLRSPGLYQVGAE 988
Query: 389 -EDQQTFLETTLSEI-VASLLASKGTMLTMNE-AGHLSLTSIAKAA 431
ED + + + I A+++ K ++ +E G L T + + A
Sbjct: 989 YEDDEALEQKRVDLIHSAAMVLRKSNLIKYDEKTGKLQSTELGRIA 1034
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 76/365 (20%), Positives = 154/365 (42%), Gaps = 38/365 (10%)
Query: 37 LNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYL 96
L K + + T + L + + + L + DE H+L Q G + E +VS++ Y+
Sbjct: 1468 LEKGDLILATPTQWDVLSRQWKRRKNVQTVELFIADEIHLLGGFQ-GYVYETIVSRMHYI 1526
Query: 97 KKS----IQIFAMSATIGNINALSTFIEGITY-VENSRPTKHSEYVTVDKRVFQSFDGKS 151
+ ++I A+S ++ N + +I+ + + N P H V ++ + +S
Sbjct: 1527 RSQTELPMRIIALSVSLANARDIGEWIDAKKHDIYNFSP--HVRPVPLELHL------QS 1578
Query: 152 LTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRLQFDRFPGTKEYK 211
T + +L ++ A+ + + +IF S+ A L F E +
Sbjct: 1579 FTNPHFPSLMLAMAKPTYLAITQM-SADKPAMIFVPSRKQTRATARDLLAACFADDDEDR 1637
Query: 212 -----KQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTL 266
++ + L+E + EE L E + +GV Y+H L+ +RR+++ Y G +
Sbjct: 1638 FLHAEVKQMQPLLERIHEEA-------LAEALSHGVGYYHEALSQSDRRIVKHLYDNGAI 1690
Query: 267 QIICCTSTLAAGVNLPAQRVIIRDS--YVGRDF----ISLNMYKQMVGRAGRTGLQESGE 320
Q++ + + +N A VI+ + + GR+ L+ M G+A R G
Sbjct: 1691 QVLVASRDVCWELNSTAHLVIVMGTQYFEGREHRYVDYPLSEVLHMFGKALRPSKDGRGR 1750
Query: 321 SI-MLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKTLIKH 379
+ ML + +++ + +N P+ SH+ L D + ++ + S +D
Sbjct: 1751 GVLMLPQVKREY--YKKFLNEA-LPVESHLH-NYLHDAFVTEISTKMIESGDDAINWTTF 1806
Query: 380 TLFYQ 384
T FY+
Sbjct: 1807 TYFYR 1811
>gi|224004514|ref|XP_002295908.1| RNA or DNA helicase [Thalassiosira pseudonana CCMP1335]
gi|209585940|gb|ACI64625.1| RNA or DNA helicase [Thalassiosira pseudonana CCMP1335]
Length = 2088
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 130/506 (25%), Positives = 230/506 (45%), Gaps = 74/506 (14%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V E ++ +K + + + E +G T++Q+++ + + T EK +
Sbjct: 469 LVQEVVKNFSKRLDPYGITVRELSGDSSL---TRQQISETQMIVTTPEKWDIVTRQGEGR 525
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLY----LKKSIQIFAMSATIGNINALS 116
+ L++IDE H+L++ RGP+LE +V++V+ + +++ +SAT+ N ++
Sbjct: 526 AYTQLVKLVIIDEIHLLHD-DRGPVLESIVARVIRQVETTAEPVRLVGLSATLPNYADVA 584
Query: 117 TFI-----EGITYVENS-RPTK-HSEYVTVDKR-VFQSFDGKSLTEIYADNLDYSLTGSG 168
TF+ +G+ + ++S RP +Y+ + +R F+ F ++ EI +
Sbjct: 585 TFLRVKPEKGMFFFDHSYRPVPLQMQYIGITERNAFRRFQLQN--EICYEK--------- 633
Query: 169 PDAVLHLVQGNLMVLIFCSSKI-------ACSNLAL-RLQFDRFPGTKEYKKQEKEDLIE 220
A + GN M LIF S+ A ++AL R Q F KE + E
Sbjct: 634 --ATVQRKNGNQM-LIFVHSRAETGKTAKALRDIALERDQLSLF--VKEGGATQ-----E 683
Query: 221 ALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVN 280
L+EE + +L++ + +G A HHA + +R L+E+ + G + ++CCT+TLA GVN
Sbjct: 684 ILREEVATVKNADLKDVLSFGFAIHHAGMARADRELVEDLFADGHIGVLCCTATLAWGVN 743
Query: 281 LPAQRVIIR-----DSYVGR--DFISLNMYKQMVGRAGRTGLQESGESIMLC--KTMQDF 331
LPA VII+ D GR + L++ QM+GRAGR GE I++ +Q +
Sbjct: 744 LPAHAVIIKGTQIYDPSKGRWAELSPLDVL-QMLGRAGRPQYDNEGEGIIMTAHSELQYY 802
Query: 332 LRFSSMMNAGPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFY--QLKSP- 388
L +++ P+ S M TL D + V ++ + + +T Y LK+P
Sbjct: 803 LSLTNLQ----LPVESQM-IKTLPDHLNAEVVLGTIQTISEAVDWLSYTFLYVRMLKNPN 857
Query: 389 ----EDQQTFLETTLSEIVASLLASKGTMLTMN-------EAGHLSLTSIAKAAVQAGLS 437
D+ + TL L + ML + +G L T + + A Q +S
Sbjct: 858 LYGISDKAASEDPTLKHRRMDLAHTAACMLERSHLVRYDRRSGALQSTPLGRIASQYYIS 917
Query: 438 HDVCLIIYSDLLHNKLNFCLLNSLHM 463
H + L N + LL M
Sbjct: 918 HSSMALYSRHLRPNMADIDLLRLFSM 943
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 79/386 (20%), Positives = 156/386 (40%), Gaps = 56/386 (14%)
Query: 28 GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILE 87
G+ P + + + I +CT ++ + Q + I L ++D+ H L GP +E
Sbjct: 1333 GEVTPDLKFIAEARIIVCTAKQWDAISRRWRQRKAVQAITLCIVDDIHFLGG-DAGPTME 1391
Query: 88 CVVSKVLYLKKSIQ---------IFAMSATIGNINALSTFIEGIT------YVENSRPTK 132
++S++ ++ Q + + A++ N + ++ G++ + RP
Sbjct: 1392 VIISRMRFISTQKQQKEDSPQLRMIGLGASLANAREVGEWM-GVSSKGLFNFSPKVRPIP 1450
Query: 133 HSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIAC 192
Y F SFD + +A L ++ +AV+ +G LIF S+
Sbjct: 1451 LEIY-------FHSFDQSN----FAGRL-MAMGKPVYNAVMRHSEGK-PSLIFVPSRRQA 1497
Query: 193 SNLALRL-------QFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYH 245
A+ L D F +KE E D+ L+E L++ G+ +
Sbjct: 1498 QLTAIDLMTYHQSIDGDTFL-SKETNALEIADVAACLRE-------PALQQVTSSGIGFL 1549
Query: 246 HADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVII--RDSYVGRD--FISLN 301
H + + I Y G+L ++ C + + + A V+I +++ GR+ ++
Sbjct: 1550 HDGMVESDWEQILGLYRKGSLTVLVCPVDICWKIKVMAHLVVIMGTETFDGRERRYVDYP 1609
Query: 302 MYK--QMVGRAGRTGLQESGESIMLCKT-MQDFLRFSSMMNAGPEPISSHMDPPTLVDLI 358
+ M+G A R + G+ +++C T ++ L+ + P P+ SH+D L D
Sbjct: 1610 IADLLHMMGMASRQAIDTCGKCVIMCHTPKKEHLK---KLLYDPLPVESHLD-HYLHDHF 1665
Query: 359 LEVVAANLCSSLEDVKTLIKHTLFYQ 384
+ S ++D I TL Y+
Sbjct: 1666 NSEIVTKTISCMQDAVDYITWTLLYR 1691
>gi|71018551|ref|XP_759506.1| hypothetical protein UM03359.1 [Ustilago maydis 521]
gi|46098994|gb|EAK84227.1| hypothetical protein UM03359.1 [Ustilago maydis 521]
Length = 1297
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 104/383 (27%), Positives = 171/383 (44%), Gaps = 66/383 (17%)
Query: 39 KKSIYICTIEKGSKLIGSLIQENRI-DEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLK 97
K + I T EK L + + I I L++IDE H+LNE QRG LE VV++
Sbjct: 275 KSRLIITTPEKWDSLTRKWDENSSILSTIRLLLIDEVHILNESQRGARLEVVVTRTRSRG 334
Query: 98 KSIQIFAMSATIGNINALSTFI-------------------EGITYVENSRPTKHSEYV- 137
++ A+SAT+ N+ ++ +I E + + RP ++V
Sbjct: 335 HQVRFVAVSATVPNLADVAAWIGPNLSLQRRDRALSNKQSAEVFQFGDEYRPCPLQKHVY 394
Query: 138 ----TVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACS 193
D+ FQ++ L E+ + L+FC+++ +
Sbjct: 395 GYPKAKDEFAFQAYLNHKLFEL-----------------IETHAAGRPCLVFCATRRST- 436
Query: 194 NLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTN--------LEECILYGVAYH 245
LQ K +E L + G S N L G+A+H
Sbjct: 437 -----LQAANMIAEACKKAKEAGGRATLLSHDTHGSRSMNGAIFDDPDLTALASLGIAFH 491
Query: 246 HADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS--YVGR--DFISLN 301
HA L+ +RR +E+A+LAG + ++CCT+TLA G+NLPA VIIR + Y G+ + L+
Sbjct: 492 HAGLSILDRRKVEQAFLAGKIAVLCCTTTLATGINLPAYCVIIRGTKQYDGQWCEMSELD 551
Query: 302 MYKQMVGRAGRTGLQESGESIMLCK-TMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILE 360
+ QM+GRAGR SG ++++C+ TMQ R + +G I S + P LV+ I
Sbjct: 552 LI-QMMGRAGRPQFDRSGIAVIMCEDTMQAHYR---ELVSGSRDIESSL-APCLVEQINA 606
Query: 361 VVAANLCSSLEDVKTLIKHTLFY 383
+ ++ D++ I+ + +
Sbjct: 607 EIGLYGKTTEPDIEDWIRQSFMW 629
>gi|444319875|ref|XP_004180594.1| hypothetical protein TBLA_0E00120 [Tetrapisispora blattae CBS 6284]
gi|387513637|emb|CCH61075.1| hypothetical protein TBLA_0E00120 [Tetrapisispora blattae CBS 6284]
Length = 1297
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 101/341 (29%), Positives = 162/341 (47%), Gaps = 43/341 (12%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGV-KGQYPPTKRQLNKK-SIYICTIEKGSKLIGSLI 58
+ +EKY S K +L G+ G ++ + KK +I I T EK L
Sbjct: 244 LCYEKYNSWGK------LFLNLSVGILTGDSSVSESEKVKKCNIIITTPEKWDVLTRKWW 297
Query: 59 QENRIDE-IGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALST 117
++ E + LI++DE H L E +RG LE V++++ + + I+I +SATI N+N ++
Sbjct: 298 DYIKLFELVKLILVDEIHTLKE-KRGATLEVVLTRMNCMCQDIRIIGVSATIPNLNDIAL 356
Query: 118 FIEGITYVENSRPTK----HSEYVTVD-KRVFQSFDGKSLTEIYADNLDYSLTGSGPDAV 172
++ K Y V K+ Q ++ + E DN+ P +
Sbjct: 357 WLRNSETYNKQTAAKALNFDDSYRQVSLKKYVQGYNFSTKNEFQRDNI---YNTKLPTII 413
Query: 173 LHLVQGNLMVLIFCSSKIACSNLALRL-QFDRFPGTKEYKKQEKEDLIEALKEENDGKLS 231
+G +LIFC ++ + A L Q F K ++ ++ +
Sbjct: 414 RDFSKGK-PILIFCPTRSSTVVTAKYLAQNTCFQNDKSHRSSFTANISDR---------- 462
Query: 232 TNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS 291
L ECI +AYHHA L+ ER+L+EE++ G ++I+CCTSTLA GVNLPA VII+
Sbjct: 463 -TLLECIGQNIAYHHAGLSLDERKLVEESFKNGNIKILCCTSTLAVGVNLPAFLVIIK-- 519
Query: 292 YVGRDFISLNMYK--------QMVGRAGRTGLQESGESIML 324
G F S + + QMVGRAGR ++ G ++++
Sbjct: 520 --GTKFWSTSTSEEYSQLDILQMVGRAGRPQFEKEGCAVIM 558
>gi|256376663|ref|YP_003100323.1| DEAD/DEAH box helicase domain-containing protein [Actinosynnema
mirum DSM 43827]
gi|255920966|gb|ACU36477.1| DEAD/DEAH box helicase domain protein [Actinosynnema mirum DSM
43827]
Length = 1318
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 97/389 (24%), Positives = 169/389 (43%), Gaps = 35/389 (8%)
Query: 36 QLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLY 95
++ +++ T EK + + + + E+G +V+DE H+L P RG +LE ++++V
Sbjct: 635 RVRAADLWVATTEKFEAVCRAASLQAALGEVGCLVVDEIHLLGSPGRGALLEALLARVRG 694
Query: 96 LKKSIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEI 155
++I +SAT+ N ++ +++ RP+K VT + G +
Sbjct: 695 ADSPVRIVGLSATVTNAAEVAEWLQARMVATAWRPSK----VTWQLPTVPATSGFAAASR 750
Query: 156 YADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEK 215
+ + L G H G VL+FC SK + A+ + +R E +
Sbjct: 751 VREQVAVDLVGR------HTADGG-SVLVFCGSKRNVLSTAMAVAAER---GAELPAPDD 800
Query: 216 EDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTL 275
D +EA C GV H++D + E A+ A ++ TST+
Sbjct: 801 LDALEAA--------------CAAVGVRMHYSDYE--HKHAAERAFRARESDVLVATSTV 844
Query: 276 AAGVNLPAQRVIIRDSYVGRDFISLNMYKQMVGRAGRTGLQES-GESIMLCKTMQDFLRF 334
AAGVNLPA+ V++RDS +G + + + QM GRAGR G E+ G S ++ Q +
Sbjct: 845 AAGVNLPARAVVVRDSSIGGEPMDTSTVLQMFGRAGRIGAGETEGWSYLVVDESQRAA-W 903
Query: 335 SSMMNAGPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQLKSPEDQQTF 394
+ + AG S + +L D +L V ++ D + TL + + +D+
Sbjct: 904 QARLVAGYSVYSRIRE--SLADHVLAEVLQGRVTTEADARAWWVQTLAHA-QGDDDESVV 960
Query: 395 LETTLSEIVASLLASKGTMLTMNEAGHLS 423
+E + L G L E G L+
Sbjct: 961 VEAVGFLVEQGYLTRSGDALATTELGRLT 989
>gi|6321020|ref|NP_011099.1| Brr2p [Saccharomyces cerevisiae S288c]
gi|731380|sp|P32639.2|BRR2_YEAST RecName: Full=Pre-mRNA-splicing helicase BRR2; AltName:
Full=Protein Snu246
gi|603413|gb|AAB64699.1| Brr2p: Putative ATP-dependent RNA helicase [Saccharomyces
cerevisiae]
gi|1699380|gb|AAB37500.1| Rss1p=ATP-dependent RNA helicase homolog [Saccharomyces cerevisiae,
Peptide Mutant, 2163 aa]
gi|285811806|tpg|DAA07834.1| TPA: Brr2p [Saccharomyces cerevisiae S288c]
gi|392299877|gb|EIW10969.1| Brr2p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 2163
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 110/386 (28%), Positives = 184/386 (47%), Gaps = 40/386 (10%)
Query: 24 AGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRG 83
A + G +++Q+++ + + T EK + ++ + L++IDE H+L++ RG
Sbjct: 586 AELTGDSRLSRKQIDETQVLVSTPEKWDITTRNSNNLAIVELVRLLIIDEIHLLHD-DRG 644
Query: 84 PILECVVSKVLYLKKSIQ----IFAMSATIGNINALSTFI----EGITYVENS-RPTKHS 134
P+LE +V++ + K Q I +SAT+ N + F+ EG+ Y ++S RP S
Sbjct: 645 PVLESIVARTFWASKYGQEYPRIIGLSATLPNYEDVGRFLRVPKEGLFYFDSSFRPCPLS 704
Query: 135 E-YVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACS 193
+ + + +R SL ++ A + + + VL + +++F S+ S
Sbjct: 705 QQFCGIKER-------NSLKKLKA------MNDACYEKVLESINEGNQIIVFVHSRKETS 751
Query: 194 NLALRLQFDRFPGTKEYKKQEKEDL--IEALKEENDGKLSTNLEECILYGVAYHHADLTA 251
A L+ ++F K K D + LK E L +L + I G+ HHA LT
Sbjct: 752 RTATWLK-NKFAEENITHKLTKNDAGSKQILKTEAANVLDPSLRKLIESGIGTHHAGLTR 810
Query: 252 GERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYV------GRDFISLNMYKQ 305
+R L E+ + G LQ++ CT+TLA GVNLPA VII+ + V + +S Q
Sbjct: 811 SDRSLSEDLFADGLLQVLVCTATLAWGVNLPAHTVIIKGTDVYSPEKGSWEQLSPQDVLQ 870
Query: 306 MVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAAN 365
M+GRAGR GE I++ + + S++N PI S + +L EVVA N
Sbjct: 871 MLGRAGRPRYDTFGEGIIITD-QSNVQYYLSVLNQQL-PIESQFVSKLVDNLNAEVVAGN 928
Query: 366 L-CSSLEDVKTLIKHTLFY--QLKSP 388
+ C + D + +T Y L SP
Sbjct: 929 IKCRN--DAVNWLAYTYLYVRMLASP 952
>gi|349577833|dbj|GAA23001.1| K7_Brr2p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 2163
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 110/386 (28%), Positives = 184/386 (47%), Gaps = 40/386 (10%)
Query: 24 AGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRG 83
A + G +++Q+++ + + T EK + ++ + L++IDE H+L++ RG
Sbjct: 586 AELTGDSRLSRKQIDETQVLVSTPEKWDITTRNSNNLAIVELVRLLIIDEIHLLHD-DRG 644
Query: 84 PILECVVSKVLYLKKSIQ----IFAMSATIGNINALSTFI----EGITYVENS-RPTKHS 134
P+LE +V++ + K Q I +SAT+ N + F+ EG+ Y ++S RP S
Sbjct: 645 PVLESIVARTFWASKYGQEYPRIIGLSATLPNYEDVGRFLRVPKEGLFYFDSSFRPCPLS 704
Query: 135 E-YVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACS 193
+ + + +R SL ++ A + + + VL + +++F S+ S
Sbjct: 705 QQFCGIKER-------NSLKKLKA------MNDACYEKVLESINEGNQIIVFVHSRKETS 751
Query: 194 NLALRLQFDRFPGTKEYKKQEKEDL--IEALKEENDGKLSTNLEECILYGVAYHHADLTA 251
A L+ ++F K K D + LK E L +L + I G+ HHA LT
Sbjct: 752 RTATWLK-NKFAEENFTHKLTKNDAGSKQILKTEAANVLDPSLRKLIESGIGTHHAGLTR 810
Query: 252 GERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYV------GRDFISLNMYKQ 305
+R L E+ + G LQ++ CT+TLA GVNLPA VII+ + V + +S Q
Sbjct: 811 SDRSLSEDLFADGLLQVLVCTATLAWGVNLPAHTVIIKGTDVYSPEKGSWEQLSPQDVLQ 870
Query: 306 MVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAAN 365
M+GRAGR GE I++ + + S++N PI S + +L EVVA N
Sbjct: 871 MLGRAGRPRYDTFGEGIIITD-QSNVQYYLSVLNQQL-PIESQFVSKLVDNLNAEVVAGN 928
Query: 366 L-CSSLEDVKTLIKHTLFY--QLKSP 388
+ C + D + +T Y L SP
Sbjct: 929 IKCRN--DAVNWLAYTYLYVRMLASP 952
>gi|170113841|ref|XP_001888119.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164636953|gb|EDR01243.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 2159
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 109/382 (28%), Positives = 189/382 (49%), Gaps = 50/382 (13%)
Query: 33 TKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSK 92
TK+Q+ + I + T EK + + + + + LI+IDE H+L++ +RGP+LE ++++
Sbjct: 587 TKQQIAETQIIVTTPEKWDVITRKMTDTSYTNLVRLIIIDEIHLLHD-ERGPVLESIIAR 645
Query: 93 VLYLKKS----IQIFAMSATIGNINALSTFI-----EGITYVENS-RPTK-HSEYVTV-D 140
+ + +++ +SAT+ N ++TF+ +G+ Y + S RP +++ V +
Sbjct: 646 TVRWAEQRSEFVRLLGLSATLPNYEDVATFLRVDEKKGLFYFDASYRPCGLQQQFIGVTE 705
Query: 141 KRVFQSFDGKSLTEI-YADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRL 199
K+ + + + E+ Y LD + G L+F S+ + A R
Sbjct: 706 KKAIKRY--QITNEVCYEKVLDQA--------------GKNQTLVFVHSRKETAKTA-RF 748
Query: 200 QFDRFPGTKEYKKQEKED--LIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLI 257
D + + K D + E L EE +NL + + +G A HHA ++ +R L+
Sbjct: 749 LRDTAIEKETITQFVKPDGAVREILTEEAGNVKDSNLRDLLPFGFAIHHAGMSREDRGLV 808
Query: 258 EEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYV-----GRDFISLNMYK--QMVGRA 310
EE + G++Q++ CT+TLA GVNLPA VII+ + + GR ++ L+ QM+GRA
Sbjct: 809 EELFADGSIQVLVCTATLAWGVNLPAHTVIIKGTQIYNPEKGR-WVELSSQDVLQMLGRA 867
Query: 311 GRTGLQESGESIMLC--KTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAANLCS 368
GR GE I++ MQ +L S++N PI S +L E+V + +
Sbjct: 868 GRPQYDTFGEGIIITNHSEMQYYL---SLLNQQ-LPIESQFVSKLADNLNAEIVLGTVRN 923
Query: 369 SLEDVKTLIKHTLFY--QLKSP 388
E V+ L +T Y LKSP
Sbjct: 924 RDEAVQWL-GYTYLYIRMLKSP 944
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 96/412 (23%), Positives = 168/412 (40%), Gaps = 58/412 (14%)
Query: 4 EKYQSLA-KAAEEFKFYLEEYAGVK------GQYPPTKRQLNKKSIYICTIEKGSKLIGS 56
E YQ + + E++ E+ G K G+ R L K + +CT + L
Sbjct: 1391 EPYQEMVDQRVVEWRAKFEKLQGGKEIVSLTGETSADLRLLEKGDVIVCTPTQWDVLSRR 1450
Query: 57 LIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQI----FAMSATIGNI 112
Q I IGL++ DE ++ + GP E V+S+ Y+ +I A ++ N
Sbjct: 1451 WRQRKNIQNIGLLIADEVQLVGG-EVGPTYEVVISRTRYVSAQTEIKTRIVACGVSLANA 1509
Query: 113 NALSTFIEG-----ITYVENSRPTK---HSEYVTVDKRVFQSFDGKSLTEIYADNLDYSL 164
L ++ + ++RP H + T+ F S Y L+YS
Sbjct: 1510 RDLGEWMGAPSHAIFNFSPSARPLDMDIHLQSFTIPH--FPSLMIAMSKPAYLAVLEYS- 1566
Query: 165 TGSGPDAVLHLVQGNLMVLIFCSSKIAC----SNLALRLQFDRFPGTKEYKKQEKEDLIE 220
S P V++F S+ C +L D P + E +DL
Sbjct: 1567 -PSKP------------VIVFVPSRRQCRLTVDDLLTHCLADDKP--DRFLNIELDDLQP 1611
Query: 221 ALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVN 280
L ND L E + +G+ Y+H L ++R+++ + +G +Q++ + A +
Sbjct: 1612 HLDHIND----KGLVETLKHGIGYYHEALDKQDKRIVQRLFESGAIQLLVASKDTAWSLP 1667
Query: 281 LPAQRVIIRDS--YVGR-----DFISLNMYKQMVGRAGRTGLQESGESIMLC-KTMQDFL 332
+ + VII Y G+ D+ +++ QM+GRA R E +++C +T +DF
Sbjct: 1668 VASYMVIIMGVQFYEGKEHRYIDYPVMDVL-QMMGRACRPMEDERSRCVLMCQQTRKDF- 1725
Query: 333 RFSSMMNAGPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQ 384
+ + G PI SH+ L D L +A + +D ++ T FY+
Sbjct: 1726 -YKKFLAEG-LPIESHLPTHLLHDYFLAEIAVKTIENKQDAMDILTWTYFYR 1775
>gi|336375164|gb|EGO03500.1| hypothetical protein SERLA73DRAFT_83528 [Serpula lacrymans var.
lacrymans S7.3]
Length = 2112
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 106/384 (27%), Positives = 188/384 (48%), Gaps = 54/384 (14%)
Query: 33 TKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSK 92
TK+Q+++ I + T EK + + + + LI+IDE H+L++ +RGP+LE +V++
Sbjct: 541 TKQQISETQIIVTTPEKWDVITRKSTDTSYTNIVRLIIIDEIHLLHD-ERGPVLESIVAR 599
Query: 93 VL----YLKKSIQIFAMSATIGNINALSTFI-----EGITYVENS-RPTK-HSEYVTV-D 140
+ + +++ +SAT+ N ++TF+ +G+ Y + S RP +++ V +
Sbjct: 600 TIRRMEQTSEYVRLVGLSATLPNYQDVATFLRVDESKGLFYFDASYRPCGLQQQFIGVTE 659
Query: 141 KRVFQSFDGKSLTEI-YADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRL 199
K+ + + + + E+ Y LD + G L+F S+ + A
Sbjct: 660 KKAIKRY--QVMNEVCYDKVLDQA--------------GKNQTLVFVHSRKETAKTA--- 700
Query: 200 QFDRFPGTKEYKKQEKEDLI-------EALKEENDGKLSTNLEECILYGVAYHHADLTAG 252
+F +K+ + E L EE + NL++ + +G A HHA +T
Sbjct: 701 ---KFIRDMAIEKETITQFVRPDSATREILNEEANNVKDGNLKDLLPFGFAIHHAGMTRE 757
Query: 253 ERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYV-----GRDFISLNMYK--Q 305
+R L+EE + G +Q++ CT+TLA GVNLPA VII+ + + GR ++ L+ Q
Sbjct: 758 DRGLVEELFADGAVQVLVCTATLAWGVNLPAHTVIIKGTQIYNPEKGR-WVELSSQDVLQ 816
Query: 306 MVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAAN 365
M+GRAGR GE I++ + + S+MN PI S + +L E+V
Sbjct: 817 MLGRAGRPQYDTYGEGIIIT-NHSELQYYLSLMNQQ-LPIESQFVSKLVDNLNAEIVLGT 874
Query: 366 LCSSLEDVKTLIKHTLFYQ-LKSP 388
+ + E V+ L L+ + LKSP
Sbjct: 875 VRNRDEAVQWLGYSYLYVRMLKSP 898
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 89/392 (22%), Positives = 162/392 (41%), Gaps = 59/392 (15%)
Query: 21 EEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEP 80
+E + G+ R L K + ICT + L Q + IGL++ DE ++
Sbjct: 1365 KEIVSLTGETSADLRLLEKGDVIICTPSQWDVLSRRWRQRKNVQNIGLLIADEVQLVGG- 1423
Query: 81 QRGPILECVVSKVLYLKKSIQI----FAMSATIGNINALSTFIEG-----ITYVENSRPT 131
+ GP E V+S+ Y+ +I A S ++ N L ++ + +SRP
Sbjct: 1424 EVGPTYEVVISRTRYVSAQTEIKTRIVACSVSLANARDLGEWMGAPSHAIFNFSPSSRPL 1483
Query: 132 K---HSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSS 188
H + T+ F S Y ++Y+ T V++F S
Sbjct: 1484 DMDIHLQSFTIPH--FPSLMIAMSKPAYLAIVEYAPTKP--------------VIVFVPS 1527
Query: 189 KIAC--------SNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILY 240
+ C ++ A + DRF +E +AL+ D + L E + +
Sbjct: 1528 RRQCRLTVDDILTHCAADEKGDRFLNIEE----------DALQPHLDHISDSGLAETLKH 1577
Query: 241 GVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIR--DSYVGR--- 295
GV Y+H L ++R++E + +G +Q++ + A + + + VII Y G+
Sbjct: 1578 GVGYYHEALDKQDKRIVERLFQSGAIQVLVASKDTAWSLPVASYMVIIMGVQYYEGKEHR 1637
Query: 296 --DFISLNMYKQMVGRAGRTGLQESGESIMLC-KTMQDFLRFSSMMNAGPEPISSHMDPP 352
D+ +++ QM+GRA R + +++C +T +DF + + G PI SH+
Sbjct: 1638 YADYPVMDVL-QMMGRACRPMEDDRSRCVLMCQQTRKDF--YKKFLAEG-LPIESHLPTH 1693
Query: 353 TLVDLILEVVAANLCSSLEDVKTLIKHTLFYQ 384
L D L +A + +D ++ T FY+
Sbjct: 1694 LLHDYFLAEIAVKTIENKQDAMDILTWTYFYR 1725
>gi|256271314|gb|EEU06384.1| Brr2p [Saccharomyces cerevisiae JAY291]
Length = 2163
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 110/386 (28%), Positives = 184/386 (47%), Gaps = 40/386 (10%)
Query: 24 AGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRG 83
A + G +++Q+++ + + T EK + ++ + L++IDE H+L++ RG
Sbjct: 586 AELTGDSRLSRKQIDETQVLVSTPEKWDITTRNSNNLAIVELVRLLIIDEIHLLHD-DRG 644
Query: 84 PILECVVSKVLYLKKSIQ----IFAMSATIGNINALSTFI----EGITYVENS-RPTKHS 134
P+LE +V++ + K Q I +SAT+ N + F+ EG+ Y ++S RP S
Sbjct: 645 PVLESIVARTFWASKYGQEYPRIIGLSATLPNYEDVGRFLRVPKEGLFYFDSSFRPCPLS 704
Query: 135 E-YVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACS 193
+ + + +R SL ++ A + + + VL + +++F S+ S
Sbjct: 705 QQFCGIKER-------NSLKKLKA------MNDACYEKVLESINEGNQIIVFVHSRKETS 751
Query: 194 NLALRLQFDRFPGTKEYKKQEKEDL--IEALKEENDGKLSTNLEECILYGVAYHHADLTA 251
A L+ ++F K K D + LK E L +L + I G+ HHA LT
Sbjct: 752 RTATWLK-NKFAEENFTHKLTKNDAGSKQILKTEAANVLDPSLRKLIESGIGTHHAGLTR 810
Query: 252 GERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYV------GRDFISLNMYKQ 305
+R L E+ + G LQ++ CT+TLA GVNLPA VII+ + V + +S Q
Sbjct: 811 SDRSLSEDLFADGLLQVLVCTATLAWGVNLPAHTVIIKGTDVYSPEKGSWEQLSPQDVLQ 870
Query: 306 MVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAAN 365
M+GRAGR GE I++ + + S++N PI S + +L EVVA N
Sbjct: 871 MLGRAGRPRYDTYGEGIIITD-QSNVQYYLSVLNQQL-PIESQFVSKLVDNLNAEVVAGN 928
Query: 366 L-CSSLEDVKTLIKHTLFY--QLKSP 388
+ C + D + +T Y L SP
Sbjct: 929 IKCRN--DAVNWLAYTYLYVRMLASP 952
>gi|449439311|ref|XP_004137429.1| PREDICTED: activating signal cointegrator 1 complex subunit 3-like
[Cucumis sativus]
Length = 2093
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 105/375 (28%), Positives = 176/375 (46%), Gaps = 37/375 (9%)
Query: 28 GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILE 87
G Y P L I I T EK + + + + ++GL+++DE H+L RGPILE
Sbjct: 1376 GDYTPDLMALLSADIIISTPEKWDGISRNWHSRSYVTKVGLMILDEIHLLGA-DRGPILE 1434
Query: 88 CVVSKVLYL----KKSIQIFAMSATIGNINALSTFIE-GITYVENSRPTKHSEYVTVDKR 142
+VS++ Y+ ++ ++ +S + N + L ++ G + N +P+ + V
Sbjct: 1435 VIVSRMRYISSQTERKVRFVGLSTALANASDLGDWLGVGENGLFNFKPSVRPVPLEVH-- 1492
Query: 143 VFQSFDGKSLTEIYADNLDYSLTGSGPD-AVLHLVQGNLMVLIFCSSKIACSNLALRLQF 201
Q + GK Y ++ + + P A + VLIF SS+ AL L
Sbjct: 1493 -IQGYPGK----FYCPRMN---SMNKPTYAAICTHSPTKPVLIFVSSRRQTRLTALDLI- 1543
Query: 202 DRFPGTKEYKKQ----EKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLI 257
+F + E+ +Q +E+L L + D NL + +G+ HHA L G+R ++
Sbjct: 1544 -QFAASDEHPRQFLNMPEEELQMILCQVID----QNLRHTLQFGIGLHHAGLNDGDRSMV 1598
Query: 258 EEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS--YVGR-----DFISLNMYKQMVGRA 310
EE + +Q++ CTSTLA GVNLPA VII+ + Y G+ DF ++ QM+GRA
Sbjct: 1599 EELFANNKIQVLVCTSTLAWGVNLPAHLVIIKGTEYYDGKSKRYVDFPITDIL-QMMGRA 1657
Query: 311 GRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAANLCSSL 370
GR + G++++L + F P P+ S + + E+V+ +C
Sbjct: 1658 GRPQYDQHGKAVILVHEPRK--SFYKKFLYEPFPVESSLKEQLHDHINAEIVSGTICHKE 1715
Query: 371 EDVKTLIKHTLFYQL 385
+ V L LF +L
Sbjct: 1716 DAVHYLSWTYLFRRL 1730
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 83/279 (29%), Positives = 140/279 (50%), Gaps = 34/279 (12%)
Query: 66 IGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKS----IQIFAMSATIGNINALSTFIE- 120
+ L++IDE H+LN+ RGP++E +V++ L +S I+I +SAT+ N ++ F+
Sbjct: 565 VKLLIIDEVHLLND-DRGPVIEALVARTLRQVESTQTMIRIVGLSATLPNYLEVAQFLRV 623
Query: 121 ----GITYVENS-RPTK-HSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLH 174
G+ + ++S RP +Y+ + + F + + + L EI + DA+ H
Sbjct: 624 NPGTGLFFFDSSYRPVPLAQQYIGISEHNFAARN-ELLNEICYKKI--------VDALKH 674
Query: 175 LVQGNLMVLIFCSSKIACSNLALRL-QFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTN 233
Q ++F S+ + A +L + R E K + +K+E + +
Sbjct: 675 GHQA----MVFVHSRKDTAKTAEKLVEIGRKYDDLELFKNDAHPQFGIIKKEVIKSRNKD 730
Query: 234 LEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIR---- 289
L E +GV HHA + +R L E + G L+++ CT+TLA GVNLPA V+I+
Sbjct: 731 LVELFNFGVGVHHAGMLRSDRGLTERLFSDGLLKVLVCTATLAWGVNLPAHTVVIKGTQL 790
Query: 290 -DSYVG--RDFISLNMYKQMVGRAGRTGLQESGESIMLC 325
D G RD L++ Q+ GRAGR +SGE I++
Sbjct: 791 YDPKAGGWRDLGMLDVM-QIFGRAGRPQFDKSGEGIIIT 828
>gi|361131710|gb|EHL03362.1| putative Pre-mRNA-splicing factor brr2 [Glarea lozoyensis 74030]
Length = 1925
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 107/376 (28%), Positives = 186/376 (49%), Gaps = 36/376 (9%)
Query: 33 TKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSK 92
TK+Q+ I + T EK + + + + LI+IDE H+L++ RGP+LE +VS+
Sbjct: 640 TKQQIADTQIIVTTPEKWDVITRKATDLSYTNLVRLIIIDEIHLLHD-DRGPVLESIVSR 698
Query: 93 VL----YLKKSIQIFAMSATIGNINALSTFI-----EGITYVENS-RPTK-HSEYVTVDK 141
+ +++ +SAT+ N +++F+ +G+ + + S RP E+V + +
Sbjct: 699 TIRKMEQTGDPVRLVGLSATLPNYRDVASFLRVDPLKGMFHFDGSFRPCPLRQEFVGITE 758
Query: 142 RVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRLQF 201
+ K++ ++ N D + T + H+ + N +LIF S+ S A R
Sbjct: 759 K-------KAIKQLKTMN-DVTYT----KVLEHVGKNNHQMLIFVHSRKETSKTA-RYIR 805
Query: 202 DRFPGTKEYKKQEKEDL--IEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEE 259
D+ + + + D EAL E + L++ + YG+ HHA ++ +R +E+
Sbjct: 806 DKALEMETIGQILRSDAGSREALNSEAEAVNDRELKDLLPYGIGIHHAGMSRPDRTSVED 865
Query: 260 AYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYV----GRDFISLNMYK--QMVGRAGRT 313
+ G +Q++ CT+TLA GVNLPA VII+ + V ++ L+ QM+GRAGR
Sbjct: 866 LFNDGMIQVLVCTATLAWGVNLPAHTVIIKGTQVYSPEKGSWVELSPQDVLQMLGRAGRP 925
Query: 314 GLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAANLCSSLEDV 373
GE I++ T + + S++N PI S + +L EVV N+ S E V
Sbjct: 926 QYDTYGEGIIIT-TQSEMQYYLSLLNQQ-LPIESQFVSKLVDNLNAEVVLGNVRSRDEGV 983
Query: 374 KTLIKHTLFYQ-LKSP 388
+ L LF + L+SP
Sbjct: 984 EWLGYTYLFVRMLRSP 999
Score = 43.1 bits (100), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 73/161 (45%), Gaps = 10/161 (6%)
Query: 234 LEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS-- 291
L E + +GV Y+H L+A ++R+++ Y G +Q++ + + ++ A V++ +
Sbjct: 1622 LAEAVSHGVGYYHEALSASDKRIVKHLYNNGAIQVLVASRDVCWELDCVAHLVVVMGTQY 1681
Query: 292 YVGRDF----ISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISS 347
Y GR+ L+ QM G+A R + G +++ ++ + +N PI S
Sbjct: 1682 YEGREHRYVDYPLSEVLQMFGKASRPLEDKLGRGVLMVPAVKREY-YKKFLNEA-LPIES 1739
Query: 348 HMDP--PTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQLK 386
H+ V I E + A S D + L+K Q +
Sbjct: 1740 HLQAYLHDAVKDIFEFMEAMDPSENPDYEALVKRLSLSQTQ 1780
>gi|449487073|ref|XP_004157488.1| PREDICTED: LOW QUALITY PROTEIN: activating signal cointegrator 1
complex subunit 3-like [Cucumis sativus]
Length = 2067
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 104/374 (27%), Positives = 173/374 (46%), Gaps = 35/374 (9%)
Query: 28 GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILE 87
G Y P L I I T EK + + + + ++GL+++DE H+L RGPILE
Sbjct: 1350 GDYTPDLMALLSADIIISTPEKWDGISRNWHSRSYVTKVGLMILDEIHLLGA-DRGPILE 1408
Query: 88 CVVSKVLYL----KKSIQIFAMSATIGNINALSTFIE-GITYVENSRPTKHSEYVTVDKR 142
+VS++ Y+ ++ ++ +S + N + L ++ G + N +P+ + V
Sbjct: 1409 VIVSRMRYISSQTERKVRFVGLSTALANASDLGDWLGVGENGLFNFKPSVRPVPLEVH-- 1466
Query: 143 VFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRLQFD 202
Q + GK Y ++ + H VLIF SS+ AL L
Sbjct: 1467 -IQGYPGK----FYCPRMNSMNKPTYAAICTH--SPTKPVLIFVSSRRQTRLTALDLI-- 1517
Query: 203 RFPGTKEYKKQ----EKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIE 258
+F + E+ +Q +E+L L + D NL + +G+ HHA L G+R ++E
Sbjct: 1518 QFAASDEHPRQFLNMPEEELQMILCQVID----QNLRHTLQFGIGLHHAGLNDGDRSMVE 1573
Query: 259 EAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS--YVGR-----DFISLNMYKQMVGRAG 311
E + +Q++ CTSTLA GVNLPA VII+ + Y G+ DF ++ QM+GRAG
Sbjct: 1574 ELFANNKIQVLVCTSTLAWGVNLPAHLVIIKGTEYYDGKSKRYVDFPITDIL-QMMGRAG 1632
Query: 312 RTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAANLCSSLE 371
R + G++++L + F P P+ S + + E+V+ +C +
Sbjct: 1633 RPQYDQHGKAVILVHEPRK--SFYKKFLYEPFPVESSLKEQLHDHINAEIVSGTICHKED 1690
Query: 372 DVKTLIKHTLFYQL 385
V L LF +L
Sbjct: 1691 AVHYLSWTYLFRRL 1704
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 83/279 (29%), Positives = 140/279 (50%), Gaps = 34/279 (12%)
Query: 66 IGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKS----IQIFAMSATIGNINALSTFIE- 120
+ L++IDE H+LN+ RGP++E +V++ L +S I+I +SAT+ N ++ F+
Sbjct: 548 VKLLIIDEVHLLND-DRGPVIEALVARTLRQVESTQTMIRIVGLSATLPNYLEVAQFLRV 606
Query: 121 ----GITYVENS-RPTK-HSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLH 174
G+ + ++S RP +Y+ + + F + + + L EI + DA+ H
Sbjct: 607 NPGTGLFFFDSSYRPVPLAQQYIGISEHNFAARN-ELLNEICYKKI--------VDALKH 657
Query: 175 LVQGNLMVLIFCSSKIACSNLALRL-QFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTN 233
Q ++F S+ + A +L + R E K + +K+E + +
Sbjct: 658 GHQA----MVFVHSRKDTAKTAEKLVEIGRKYDDLELFKNDAHPQFGIIKKEVIKSRNKD 713
Query: 234 LEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIR---- 289
L E +GV HHA + +R L E + G L+++ CT+TLA GVNLPA V+I+
Sbjct: 714 LVELFNFGVGVHHAGMLRSDRGLTERLFSDGLLKVLVCTATLAWGVNLPAHTVVIKGTQL 773
Query: 290 -DSYVG--RDFISLNMYKQMVGRAGRTGLQESGESIMLC 325
D G RD L++ Q+ GRAGR +SGE I++
Sbjct: 774 YDPKAGGWRDLGMLDVM-QVFGRAGRPQFDKSGEGIIIT 811
>gi|151944889|gb|EDN63148.1| DEIH-box ATPase [Saccharomyces cerevisiae YJM789]
Length = 2162
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 110/386 (28%), Positives = 184/386 (47%), Gaps = 40/386 (10%)
Query: 24 AGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRG 83
A + G +++Q+++ + + T EK + ++ + L++IDE H+L++ RG
Sbjct: 585 AELTGDSRLSRKQIDETQVLVSTPEKWDITTRNSNNLAIVELVRLLIIDEIHLLHD-DRG 643
Query: 84 PILECVVSKVLYLKKSIQ----IFAMSATIGNINALSTFI----EGITYVENS-RPTKHS 134
P+LE +V++ + K Q I +SAT+ N + F+ EG+ Y ++S RP S
Sbjct: 644 PVLESIVARTFWASKYGQEYPRIIGLSATLPNYEDVGRFLRVPKEGLFYFDSSFRPCPLS 703
Query: 135 E-YVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACS 193
+ + + +R SL ++ A + + + VL + +++F S+ S
Sbjct: 704 QQFCGIKER-------NSLKKLKA------MNDACYEKVLESINEGNQIIVFVHSRKETS 750
Query: 194 NLALRLQFDRFPGTKEYKKQEKEDL--IEALKEENDGKLSTNLEECILYGVAYHHADLTA 251
A L+ ++F K K D + LK E L +L + I G+ HHA LT
Sbjct: 751 RTATWLK-NKFAEENITHKLTKNDAGSKQILKTEAANVLDPSLRKLIESGIGTHHAGLTR 809
Query: 252 GERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYV------GRDFISLNMYKQ 305
+R L E+ + G LQ++ CT+TLA GVNLPA VII+ + V + +S Q
Sbjct: 810 SDRSLSEDLFADGLLQVLVCTATLAWGVNLPAHTVIIKGTDVYSPEKGSWEQLSPQDVLQ 869
Query: 306 MVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAAN 365
M+GRAGR GE I++ + + S++N PI S + +L EVVA N
Sbjct: 870 MLGRAGRPRYDTFGEGIIITD-QSNVQYYLSVLNQQL-PIESQFVSKLVDNLNAEVVAGN 927
Query: 366 L-CSSLEDVKTLIKHTLFY--QLKSP 388
+ C + D + +T Y L SP
Sbjct: 928 IKCRN--DAVNWLAYTYLYVRMLASP 951
>gi|328772673|gb|EGF82711.1| hypothetical protein BATDEDRAFT_34385 [Batrachochytrium dendrobatidis
JAM81]
Length = 2233
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 109/389 (28%), Positives = 192/389 (49%), Gaps = 41/389 (10%)
Query: 16 FKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFH 75
K Y A + G TK+Q+++ I + T EK + + + + LI+IDE H
Sbjct: 637 LKSYGVNVAELTGDRQLTKQQISETQIIVTTPEKWDIITRKATDRSYTNLVRLIIIDEIH 696
Query: 76 MLNEPQRGPILECVVSKVLYL----KKSIQIFAMSATIGNINALSTFIE-----GITYVE 126
+L++ +RGP+LE +V++ L + +++ +SAT+ N ++TF+ G+ + +
Sbjct: 697 LLHD-ERGPVLEAIVARTLRQVQQSQDPVRLVGLSATLPNYADVATFLRVDPASGVFFFD 755
Query: 127 NS-RPTK-HSEYVTVDKRVFQSFDGKSLTEIYADN-LDYSLTGSGPDAVLHLVQGNLMVL 183
NS RP +YV + ++ K++ + N + Y + VL + + VL
Sbjct: 756 NSFRPCPLKQQYVGITEK-------KAIKRLALMNEIAY-------EKVLEAAEKDDQVL 801
Query: 184 IFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLI--EALKEENDGKLSTNLEECILYG 241
IFC S+ + A ++ D K+D E L+ E++ + +L++ + YG
Sbjct: 802 IFCHSRKETAKTA-KIIRDMAIANDTIGSILKDDRARREILQSESENCANEDLKDVLPYG 860
Query: 242 VAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGR-DF--- 297
A HHA +T +R L+E+ + ++I+ T+TLA GVNLPA VII+ + V R D
Sbjct: 861 FAIHHAGMTRLDRSLVEDLFRDKNVRILVSTATLAWGVNLPAHTVIIKGTQVYRPDLGRW 920
Query: 298 --ISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLV 355
+S QM+GRAGR GE +++ T + + S++N PI S + L
Sbjct: 921 AELSPQDMLQMLGRAGRPSFDTFGEGVIIT-THTELQYYLSLLNQQ-LPIESQL-VSRLP 977
Query: 356 DLI-LEVVAANLCSSLEDVKTLIKHTLFY 383
D++ E+V N+ S +D + +T Y
Sbjct: 978 DILNAEIVMGNV-RSRQDAVDWLGYTYLY 1005
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 70/331 (21%), Positives = 141/331 (42%), Gaps = 37/331 (11%)
Query: 37 LNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYL 96
L + T +K L Q + +GL ++D+ H++ GP +E +VS++ Y+
Sbjct: 1498 LETGDVIFSTPQKWDMLSRRWKQRKNVQTVGLFIVDDIHLIGS-DIGPAIEVIVSRMRYV 1556
Query: 97 ----KKSIQIFAMSATIGNINALSTFIEGITY-VENSRPTKHSEYVTVDKRVFQSFDGKS 151
+ I+I A+ A++ N L ++ + + N P+ + + + + S
Sbjct: 1557 SVQTENKIRIVALGASLSNALDLGEWMGASAHTIFNFHPSVRPVPLEIHIQGYNIPHFPS 1616
Query: 152 LTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRL------QFDRFP 205
L ++T A+ L + +IF S+ A+ L DR
Sbjct: 1617 LM--------LAMTKPTYLAISSLAETK-PAIIFVPSRKQSRMTAVELLTLCLADGDR-- 1665
Query: 206 GTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGT 265
K++ ED+ L+ ND L +E YGVA++H L ++ ++E + G
Sbjct: 1666 --KKFLHCSDEDIQPYLQRINDPALVQTIE----YGVAFYHEALGKSDKAIVESLFDLGA 1719
Query: 266 LQIICCTSTLAAGVNLPAQRVIIRDS--YVGRD--FISLNMYK--QMVGRAGRTGLQESG 319
+Q++ + + L ++ V+I + + G++ ++ + QM+GRA R E G
Sbjct: 1720 IQVVVASRDTCWSLRLQSRLVVIMGTQYFEGKEHRYVDYPITDVLQMMGRASRPLADEVG 1779
Query: 320 ESIMLCKTMQDFLRFSSMMNAGPEPISSHMD 350
+++C+ ++ F P+ SH+D
Sbjct: 1780 LCVLMCQNVKK--EFYKKFLHEALPVESHLD 1808
>gi|123456065|ref|XP_001315771.1| Type III restriction enzyme, res subunit family protein
[Trichomonas vaginalis G3]
gi|121898458|gb|EAY03548.1| Type III restriction enzyme, res subunit family protein
[Trichomonas vaginalis G3]
Length = 876
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 115/428 (26%), Positives = 196/428 (45%), Gaps = 60/428 (14%)
Query: 230 LSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPA-QRVII 288
+ T L ECI + +A+H+A LT ER+LIE+ +++I CT+TL+AG+N+ + RV+I
Sbjct: 452 IDTFLMECISHRIAFHNAGLTIEERKLIEKMAKENMIKVIVCTTTLSAGINIRSVSRVVI 511
Query: 289 RDSYVGRD----FISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEP 344
D Y D I+ ++ QM GRAGR +E ++C D + S M P P
Sbjct: 512 LDMYRKSDNKKELITKTVFSQMSGRAGR---KEGVSGDVVCVVNDDEIEEISDMIINPLP 568
Query: 345 ISSHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLF-YQLKSPEDQQTFLETTLSEIV 403
++KT + F Y L+S ++ T E V
Sbjct: 569 ---------------------------EIKTKKDESCFSYVLQSI--SLGIMDKTDEEYV 599
Query: 404 ASLLASKGTMLTMNEAGHLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLN-FCLLNSLH 462
L L + + L T + ++ A + D L I S ++ + +N CL + LH
Sbjct: 600 QKLRD-----LGLLQKNSLDTTKLGESLANANIKIDDGLEI-SKIVSSMVNKICLTDDLH 653
Query: 463 MLFLVIPLEYRIPSDGILLSR--SKVYDRYTKFHPQTLRVAEALGVT----ENLVALNVT 516
+L + P + + IL+ + S++++R + H + + LG T E ++ LN
Sbjct: 654 ILLVCCP---KNENSQILIPKISSQIFERVIRNHLNCVMII--LGKTKEEIEKMIVLNAA 708
Query: 517 G---KLKDEKKALLCRFFHACILYDVLNFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKV 573
G K E++ LL R + + IL D++N + ++A+ Y I +Q+ ++ A
Sbjct: 709 GFENKTTKEEENLLKRIYISSILCDLVNEISFTEIAEKYKIDRGTVQSLQTSSAAVAGMA 768
Query: 574 YRFCEELPELWCYKQLLTDLPQTLMYCRAPNLRALMDLPGVKIGRARQLLNAGYSSLELI 633
RFCE + QL + + + L +C L L+ +PGV AR L + G S+ E +
Sbjct: 769 TRFCESMGYSLVAAQL-SIMRKRLSFCVKQELLELVSIPGVTPENARILFDNGISNAERL 827
Query: 634 ARADAKEM 641
+ E+
Sbjct: 828 STMSIGEL 835
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 54/99 (54%), Gaps = 2/99 (2%)
Query: 41 SIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSI 100
SI ICT EK ++ + I+ +I L++IDE HM+ + RG + E ++ K+ L+
Sbjct: 132 SIAICTYEKAHSILNNSIKTGYHQDIKLVIIDEAHMIGDESRGVVAEALLMKLKSLQTQP 191
Query: 101 QIFAMSATIGNINA--LSTFIEGITYVENSRPTKHSEYV 137
QI A++AT+ +A L+ I G ++ + R Y+
Sbjct: 192 QIIALTATLNEEDARRLAQSINGYAFISHKRIAPLKTYI 230
>gi|374578466|ref|ZP_09651562.1| superfamily II helicase [Bradyrhizobium sp. WSM471]
gi|374426787|gb|EHR06320.1| superfamily II helicase [Bradyrhizobium sp. WSM471]
Length = 1006
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 90/337 (26%), Positives = 159/337 (47%), Gaps = 25/337 (7%)
Query: 63 IDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKK---SIQIFAMSATIGNINALSTFI 119
++++GL+V+DE + +P RG +E + + +L ++ Q+ +SA IGN+ + ++
Sbjct: 398 LNQLGLVVLDEGQFITDPTRGITVELIFALLLRARQRGIDPQLVVLSAVIGNLKSFDRWL 457
Query: 120 EGITYVENSRPTKHSEYVTVDKRVFQ--SFDGKSLTEIYADNLDYSLTGSGP---DAVL- 173
+ RP E V + FQ DG + TE + P D ++
Sbjct: 458 DLPLLTSRDRPVPLIEGVLDRRGTFQFVDADGTAKTETLVPPVHIVQRRDKPSSQDVIVP 517
Query: 174 ---HLVQGNLMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKL 230
LV +++F +++ A L +KE Q D++ AL ++
Sbjct: 518 LAKQLVAKGEKIIVFRNTRGPAQGCARYL-------SKELGLQAATDVLSALPTQDLTAA 570
Query: 231 STNLEECILYGVAYHHADLTAGERRLIEEAYLA--GTLQIICCTSTLAAGVNLPAQRVII 288
S +L C+ G A+H+ +L ER +E Y A G + ++ T+TLAAG+N PA VI+
Sbjct: 571 SQDLRNCLAGGTAFHNTNLLRAEREAVERGYRALNGQIHVLAATTTLAAGINSPASTVIL 630
Query: 289 RDS-YVGRDF--ISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLR-FSSMMNAGPEP 344
++ +VG D ++ YK M GRAGR G E G++I+L T + + F + PE
Sbjct: 631 AENEFVGEDGRPFTIAEYKNMAGRAGRLGYNEIGKAIILADTPVERAQLFQKYVLGRPED 690
Query: 345 ISSHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTL 381
++S L IL +++ E+V ++ +T
Sbjct: 691 VTSSFQQRDLPTWILRLLSQVRGVRAEEVPGVLANTF 727
>gi|345568070|gb|EGX50971.1| hypothetical protein AOL_s00054g707 [Arthrobotrys oligospora ATCC
24927]
Length = 1709
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 94/331 (28%), Positives = 162/331 (48%), Gaps = 34/331 (10%)
Query: 66 IGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYV 125
+ L +IDE H+L E RG LE VVS++ + ++ A+SAT+ N ++T++
Sbjct: 479 VRLFLIDEVHILKE-DRGATLEVVVSRMKTIGSRVRFVALSATVPNSKDIATWLG--KDC 535
Query: 126 ENSRPTKHSEYVTVD------KRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGN 179
+N H E + + ++V + S ++ LD L V+
Sbjct: 536 DNPSVPAHEERLGEEFRPVKLEKVVYGYQANSNDFVFDKFLDQKLY-----EVIQKHSQR 590
Query: 180 LMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECIL 239
V++FC+++ C + A ++ +++ T +K L + D +L+
Sbjct: 591 KPVMVFCATRNICVSTA-KILAEKWSSTSGMEKPWPAPLTNFSLRDRDLQLAGR------ 643
Query: 240 YGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRD--SYVG--- 294
GVA+HHA L A +R LIE+ +L G L +ICCTSTLA GVNLP V+I++ S+ G
Sbjct: 644 SGVAFHHAGLEATDRTLIEKLFLEGHLSVICCTSTLAVGVNLPTHLVVIKNTVSWQGCQM 703
Query: 295 RDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISS--HMDPP 352
R+++ L + QMVGRAGR +G ++++ T +D M +G E + S H++
Sbjct: 704 REYLDLEVM-QMVGRAGRPQFDTTGVAVIM--TRKDKKDKYERMISGTEKLESCLHLN-- 758
Query: 353 TLVDLILEVVAANLCSSLEDVKTLIKHTLFY 383
L++ + + + +E K + T Y
Sbjct: 759 -LIEHLNAEIGLGTITDIESAKQWLSSTFLY 788
>gi|444320681|ref|XP_004180997.1| hypothetical protein TBLA_0E04240 [Tetrapisispora blattae CBS 6284]
gi|387514040|emb|CCH61478.1| hypothetical protein TBLA_0E04240 [Tetrapisispora blattae CBS 6284]
Length = 2156
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 106/369 (28%), Positives = 186/369 (50%), Gaps = 37/369 (10%)
Query: 33 TKRQLNKKSIYICTIEKGSKLIGSLIQENRI-DEIGLIVIDEFHMLNEPQRGPILECVVS 91
T +++ K I + T EK +I EN I +I L++IDE H+L++ QRGP++E +V+
Sbjct: 595 TTQEMEKSHILVSTPEKWD-IITRKNAENSIYGKIDLVIIDEIHLLHD-QRGPVIENIVA 652
Query: 92 KVL---YLKKSIQIFAMSATIGNINALSTFI----EGITYVENS-RPTKHSE-YVTVDKR 142
+ L Y + ++ +SAT+ N ++ F+ EGI + ++S RP S+ + ++ ++
Sbjct: 653 RSLRGHYSTRIPRLVGLSATLPNYMDVAKFLRVPDEGIFFFDSSYRPCPLSQQFCSITEK 712
Query: 143 VFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRLQFD 202
S+ +++A N+ + D L + V++F S+ + A L+ D
Sbjct: 713 -------SSIKKLHAQNI------ACYDKTLESLSEGHQVIVFVHSRKDTARTAAWLR-D 758
Query: 203 RFPGTKEYKKQEKEDLIEA--LKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEA 260
+F K K+D L E++ + L++ + GV HHA L+ +R L E+
Sbjct: 759 QFSKNDHMNKLRKDDASSKHILTTESENAQNRQLQDLLKDGVGIHHAGLSREDRSLSEDL 818
Query: 261 YLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGR----DFISLNMYK--QMVGRAGRTG 314
+ G LQ++ T+TLA GVNLPA VII+ + V ++ L+ QM+GRAGR
Sbjct: 819 FADGLLQVLVSTATLAWGVNLPAHTVIIKGTEVYSPQHGTWLPLSPQDILQMLGRAGRPR 878
Query: 315 LQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAANLCSSLEDVK 374
GE I++ + + S++N PI S + +++D I V +N +S +D
Sbjct: 879 YDTYGEGIIIT-NQSEIQYYLSILNQQL-PIESQL-MSSILDSINAEVVSNTITSRKDAI 935
Query: 375 TLIKHTLFY 383
+K T Y
Sbjct: 936 EWLKRTYLY 944
>gi|358383653|gb|EHK21316.1| hypothetical protein TRIVIDRAFT_70327 [Trichoderma virens Gv29-8]
Length = 1980
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 105/383 (27%), Positives = 185/383 (48%), Gaps = 49/383 (12%)
Query: 33 TKRQLNKKSIYICTIEKGSKLIGSLIQENR-IDEIGLIVIDEFHMLNEPQRGPILECVVS 91
TK ++ + I + T EK + + + ++ L++IDE HML++ +RG +LE +V+
Sbjct: 381 TKAEIVQTQIIVTTPEKWDVVTRKGTGDTELVQKVRLLIIDEVHMLHD-ERGAVLESLVA 439
Query: 92 K----VLYLKKSIQIFAMSATIGNINALSTFIE-----GITYVENS-RPTKHSEYVTVDK 141
+ V + I+I +SAT+ N ++ F++ G+ Y + S RP ++
Sbjct: 440 RTERQVESTQSLIRIIGLSATLPNYVDVADFLKVNKYAGLFYFDASFRPVPLEQH----- 494
Query: 142 RVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRL-- 199
F GK+ ++ DNLD D V ++Q + V++F S+ A L
Sbjct: 495 --FIGVKGKAGSKTSKDNLD----NVAFDKVKEMLQRDHQVMVFVHSRRDTMVTARMLHQ 548
Query: 200 ----QF--DRF-PGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAG 252
QF D F P + Q D+ ++ S ++ + + G+ HHA +
Sbjct: 549 KAIEQFCVDLFDPSGHPHYGQASRDIGQSK--------SKDIRDLLSKGIGVHHAGMARA 600
Query: 253 ERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS--YVGRD--FISLNMYK--QM 306
+R L+E + G L+++CCT+TLA GVNLPA V+I+ + Y +D FI L++ Q+
Sbjct: 601 DRNLMERLFADGVLKVLCCTATLAWGVNLPAAAVVIKGTQVYSAQDGKFIDLSILDVLQI 660
Query: 307 VGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAANL 366
GRAGR +++G M+C T+ + S + +PI S + +L E+ +
Sbjct: 661 FGRAGRPQFEDTGIG-MICTTLDKLPHYLSAITEQ-QPIESKFSTKLVDNLNAEIALGTV 718
Query: 367 CSSLEDVKTLIKHTLFYQL-KSP 388
S E V+ + LF ++ +SP
Sbjct: 719 TSIPEAVQWIGYSYLFVRMQRSP 741
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 89/331 (26%), Positives = 144/331 (43%), Gaps = 50/331 (15%)
Query: 28 GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILE 87
G P R + I I T EK + S + ++ L++IDE H+L RGPILE
Sbjct: 1218 GDNTPDTRTIKDADIIITTPEKWDGISRSWQTRGYVRQVSLVIIDEIHLLAG-DRGPILE 1276
Query: 88 CVVSKVLYL----KKSIQIFAMSATIGNINALSTFI---EGITYVENS-RPTKHSEYVTV 139
+VS++ Y+ K +++ MS N L+ ++ EG+ +S RP Y+
Sbjct: 1277 IIVSRMNYISSSTKNKVRLLGMSTACANATDLANWLGVKEGLFNFRHSVRPVPLELYIDG 1336
Query: 140 DKRV------FQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSK---- 189
V QS + + ++ P+ V++F +S+
Sbjct: 1337 FPEVRGFCPLMQSMNRPTF---------LAIKNHSPEKP---------VIVFVASRRQTR 1378
Query: 190 IACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADL 249
+ +L + P + + + ++EDL L D L E I +G+ HHA L
Sbjct: 1379 LTAKDLINYCGMEDNP--RRFLRMDEEDLQLNLSRVKD----EALREAINFGIGLHHAGL 1432
Query: 250 TAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYV------GRDFISLNMY 303
+R++ EE +L +QI+ TSTLA GVNLPA V+++ + G + L
Sbjct: 1433 VESDRQIAEELFLNNKIQILVATSTLAWGVNLPAHLVVVKGTQFYDAKTSGYKDMDLTDV 1492
Query: 304 KQMVGRAGRTGLQESGES-IMLCKTMQDFLR 333
QM+GRAGR SG + I +DF +
Sbjct: 1493 LQMLGRAGRPQFDNSGVARIFTQDAKKDFYK 1523
>gi|170117230|ref|XP_001889803.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164635269|gb|EDQ99579.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 574
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 108/387 (27%), Positives = 188/387 (48%), Gaps = 60/387 (15%)
Query: 33 TKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSK 92
TK+Q+ + I + T EK + + + + + LI+IDE H+L++ +RGP+LE ++++
Sbjct: 41 TKQQIAETQIIVTTPEKWDVITRKMTDTSYTNLVRLIIIDEIHLLHD-ERGPVLESIIAR 99
Query: 93 VLYLKKS----IQIFAMSATIGNINALSTFI-----EGITYVENS-RPTK-HSEYVTV-D 140
+ + +++ +SAT+ N ++TF+ +G+ Y + S RP +++ V +
Sbjct: 100 TVRWAEQRSEFVRLLGLSATLPNYEDVATFLRVDEKKGLFYFDASYRPCGLQQQFIGVTE 159
Query: 141 KRVFQSFDGKSLTEI-YADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRL 199
K+ + + + E+ Y LD + G L+F S+ + A
Sbjct: 160 KKAIKRY--QITNEVCYEKVLDQA--------------GKNQTLVFVHSRKETAKTA--- 200
Query: 200 QFDRFPGTKEYKKQEKEDLI-------EALKEENDGKLSTNLEECILYGVAYHHADLTAG 252
RF +K+ + E L EE +NL + + +G A HHA ++
Sbjct: 201 ---RFLRDTAIEKETITQFVKPDGAVREILTEEAGNVKDSNLRDLLPFGFAIHHAGMSRE 257
Query: 253 ERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYV-----GRDFISLNMYK--Q 305
+R L+EE + G++Q++ CT+TLA GVNLPA VII+ + + GR ++ L+ Q
Sbjct: 258 DRGLVEELFADGSIQVLVCTATLAWGVNLPAHTVIIKGTQIYNPEKGR-WVELSSQDVLQ 316
Query: 306 MVGRAGRTGLQESGESIMLC--KTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVA 363
M+GRAGR GE I++ MQ +L S++N PI S +L E+V
Sbjct: 317 MLGRAGRPQYDTFGEGIIITNHSEMQYYL---SLLNQQL-PIESQFVSKLADNLNAEIVL 372
Query: 364 ANLCSSLEDVKTLIKHTLFY--QLKSP 388
+ + E V+ L +T Y LKSP
Sbjct: 373 GTVRNRDEAVQWL-GYTYLYIRMLKSP 398
>gi|149046907|gb|EDL99655.1| activating signal cointegrator 1 complex subunit 3 (predicted),
isoform CRA_b [Rattus norvegicus]
Length = 2181
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 107/398 (26%), Positives = 185/398 (46%), Gaps = 53/398 (13%)
Query: 14 EEFKFYLEEYAGVK-----GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGL 68
+++K +EE G K G P + + K + + T EK + S + + ++ +
Sbjct: 1391 DDWKIRIEEKLGKKVIELTGDVTPDMKSIAKADLIVTTPEKWDGVSRSWQNRSYVQQVNI 1450
Query: 69 IVIDEFHMLNEPQRGPILECVVSKVLYL----KKSIQIFAMSATIGNINALSTFIE---- 120
++IDE H+L E +RGP+LE +VS+ ++ +K ++I +S + N L+ ++
Sbjct: 1451 LIIDEIHLLGE-ERGPVLEVIVSRTNFISSHTEKPVRIVGLSTALANARDLADWLNIKQM 1509
Query: 121 GITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNL 180
G+ N RP+ + V Q F G+ A S+ A+
Sbjct: 1510 GLF---NFRPSVRPVPLEVH---IQGFPGQHYCPRMA-----SMNKPAFQAIRSHSPAK- 1557
Query: 181 MVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQ-------EKEDLIEALKEENDGKLSTN 233
VLIF SS+ AL L F T+E KQ E E++I +++ +N
Sbjct: 1558 PVLIFVSSRRQTRLTALELI--AFLATEEDPKQWLNMDEQEMENIIATVRD-------SN 1608
Query: 234 LEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS-- 291
L+ + +G+ HHA L +R+ +EE ++ +Q++ TSTLA GVN PA VII+ +
Sbjct: 1609 LKLTLAFGIGMHHAGLHERDRKTVEELFVNCKVQVLIATSTLAWGVNFPAHLVIIKGTEY 1668
Query: 292 YVGR-----DFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPIS 346
Y G+ DF ++ QM+GRAGR + G++++L ++ F P P+
Sbjct: 1669 YDGKTRRYVDFPITDVL-QMMGRAGRPQFDDQGKAVILVHDIKK--DFYKKFLYEPFPVE 1725
Query: 347 SHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQ 384
S + L D + +A +S +D I T F++
Sbjct: 1726 SSL-LGVLSDHLNAEIAGGTITSKQDALDYITWTYFFR 1762
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 97/373 (26%), Positives = 179/373 (47%), Gaps = 42/373 (11%)
Query: 33 TKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEI-GLIVIDEFHMLNEPQRGPILECVVS 91
+K ++ + + + T EK + + + + +I L+++DE H+L+E RGP+LE +V+
Sbjct: 572 SKSEILRTQMLVTTPEKWDVVTRKSVGDVALSQIVKLLILDEVHLLHE-DRGPVLESIVA 630
Query: 92 KVLYLKKS----IQIFAMSATIGNINALSTFIE-----GITYVENS-RPTKHSEYVTVDK 141
+ L +S I+I +SAT+ N ++TF+ G+ Y + RP
Sbjct: 631 RTLRQVESTQSMIRILGLSATLPNYLDVATFLHVNPYIGLFYFDGRFRPVP--------- 681
Query: 142 RVFQSFDG-KSLTEIYA-DNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRL 199
+ Q+F G KS ++ +N+D ++VL V+ V++F ++ A A+ L
Sbjct: 682 -LGQTFLGIKSANKMQQLNNMDEVCY----ESVLKQVKAGHQVMVFVHARNATVRTAMSL 736
Query: 200 QFDRFPGTKE---YKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRL 256
+R + + + + + ALK+ + + + E G + HHA + +R L
Sbjct: 737 -IERAKNSGQISCFLPTQGPEYGHALKQVQKSR-NKQVRELFSDGFSIHHAGMLRQDRNL 794
Query: 257 IEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS--YVGR--DFISLNMYK--QMVGRA 310
+E + G ++++ CT+TLA GVNLPA VII+ + Y + F+ L + Q+ GRA
Sbjct: 795 VENLFSNGHIKVLVCTATLAWGVNLPAHAVIIKGTQIYAAKRGSFVDLGILDVMQIFGRA 854
Query: 311 GRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAANLCSSL 370
GR + GE I++ T D L + PI S +L D + +A +++
Sbjct: 855 GRPQFDKFGEGIII--TTHDKLSHYLSLLTQQNPIESQF-LESLADNLNAEIALGTVTNV 911
Query: 371 EDVKTLIKHTLFY 383
E+ + +T Y
Sbjct: 912 EEAVKWMSYTYLY 924
>gi|255555253|ref|XP_002518663.1| U520, putative [Ricinus communis]
gi|223542044|gb|EEF43588.1| U520, putative [Ricinus communis]
Length = 1809
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 129/465 (27%), Positives = 215/465 (46%), Gaps = 74/465 (15%)
Query: 20 LEEYAGVK-----GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEF 74
L+EY GVK G T++Q+ + I + T EK + + L++IDE
Sbjct: 223 LQEY-GVKVRELSGDQSLTRQQIEETQIIVTTPEKWDIITRKSGDRTYTQLVKLLIIDEI 281
Query: 75 HMLNEPQRGPILECVVSKVLY----LKKSIQIFAMSATIGNINALSTFI-----EGITYV 125
H+L++ RGP+LE +V++ + K+ I++ +SAT+ N ++ F+ +G+ +
Sbjct: 282 HLLHD-NRGPVLESIVARTVRQIETTKEHIRLVGLSATLPNYEDVALFLRVDLKKGLFHF 340
Query: 126 ENS-RPTKHSEY---VTVDKRV--FQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGN 179
+NS RP S+ +TV K + FQ + ++ A V G
Sbjct: 341 DNSYRPVPLSQQYIGITVKKPLQRFQLMNDICYEKVMA------------------VAGK 382
Query: 180 LMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLI--EALKEENDGKLSTNLEEC 237
VLIF S+ + A ++ D + KED E L+ D S +L++
Sbjct: 383 HQVLIFVHSRKETAKTARAIR-DSALANDTLGRFLKEDSASREILQSHTDMVKSNDLKDL 441
Query: 238 ILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYV---- 293
+ YG A HHA +T +R+L+E+ + G +Q++ T+TLA GVNLPA VII+ + +
Sbjct: 442 LPYGFAIHHAGMTRADRQLVEDLFADGHVQVLVSTATLAWGVNLPAHTVIIKGTQIYNPE 501
Query: 294 ---GRDFISLNMYKQMVGRAGRTGLQESGESIMLC--KTMQDFLRFSSMMNAGPEPISSH 348
+ L++ QM+GRAGR GE I++ +Q +L S+MN PI S
Sbjct: 502 KGAWTELSPLDVM-QMLGRAGRPQYDSYGEGIIITGHTELQYYL---SLMNQQ-LPIESQ 556
Query: 349 MDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFY--QLKSP------EDQQTFLETTLS 400
L E+V + ++ E L +T Y L++P D T + TL
Sbjct: 557 FVSKLADQLNAEIVLGTVQNAREACNWL-GYTYLYIRMLRNPTLYGLAPDVLT-RDITLE 614
Query: 401 EIVASLLASKGTMLTMN-------EAGHLSLTSIAKAAVQAGLSH 438
E A L+ S T+L N ++G+ +T + + A ++H
Sbjct: 615 ERRADLIHSSATILDKNNLVKYDRKSGYFQVTDLGRIASYYYITH 659
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/309 (23%), Positives = 138/309 (44%), Gaps = 39/309 (12%)
Query: 37 LNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLY- 95
L K I I T EK L Q + ++ L +IDE H++ Q GPILE +VS++ Y
Sbjct: 1084 LEKSQIIISTPEKWDALSRRWKQRKYVQQVSLFIIDELHLIGG-QGGPILEVIVSRMRYI 1142
Query: 96 ---LKKSIQIFAMSATIGNINALSTFIEGIT-----YVENSRPTKHSEYVT-VDKRVFQS 146
++ I+I A+S+++ N L +I + + RP ++ VD +
Sbjct: 1143 ASQIENKIRIVALSSSLANAKDLGEWIGATSHGLFNFPPGVRPVPLEIHIQGVD---IAN 1199
Query: 147 FDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRLQFDRFPG 206
F+ + ++T A++ + ++F ++ A+ L
Sbjct: 1200 FEARM----------QAMTKPTYTAIVQHAKNGKPAIVFVPTRKHVRLTAVDLMTYSSAD 1249
Query: 207 TKE---YKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLA 263
+ E + + E+L + D L + L + GV Y H L++ ++ ++ + + A
Sbjct: 1250 SGEKPAFMMRSIEELEPFVGRVQDEMLRSTLRQ----GVGYLHEGLSSLDQEVVSQLFEA 1305
Query: 264 GTLQIICCTSTLAAGVNLPAQRVIIRDS--YVGR-----DFISLNMYKQMVGRAGRTGLQ 316
G +Q+ +S++ GV L A V++ + Y GR D+ ++ QM+G A R L
Sbjct: 1306 GWIQVCVMSSSMCWGVPLAAHLVVVMGTQYYDGRENAHTDYPVTDLL-QMMGHASRPLLD 1364
Query: 317 ESGESIMLC 325
SG+ ++LC
Sbjct: 1365 NSGKCVILC 1373
>gi|320169444|gb|EFW46343.1| ASCC3L1 protein [Capsaspora owczarzaki ATCC 30864]
Length = 2021
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 109/403 (27%), Positives = 190/403 (47%), Gaps = 59/403 (14%)
Query: 16 FKFYLEEYAGVK-----GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIV 70
F L E G+K G +K Q+ + + +CT EK + + + + + LI+
Sbjct: 608 FSNRLNEAYGIKVAELTGDAQLSKDQIAETQVIVCTPEKWDVITRKGGERSFTNLVSLII 667
Query: 71 IDEFHMLNEPQRGPILECVVSKVLYLKKSIQ----IFAMSATIGNINALSTFIE-----G 121
IDE H+L++ +RG +LE +V++ + +S Q I +SAT+ N ++ F+ G
Sbjct: 668 IDEVHLLHD-ERGAVLESIVARTIRQIESTQERVRIVGLSATLPNYEDVAAFLRVDLTTG 726
Query: 122 ITYVENS-RPTK-HSEYVTV-DKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQG 178
+ Y +NS RP YV + +K+ + + + + + Y + ++ L
Sbjct: 727 LFYFDNSYRPVPLEQHYVGITEKKAIKRY-------LLMNQIVY-------NKIIELKDP 772
Query: 179 NLMVLIFCSSKIACSNLALRLQ--------FDRFPGTKEYKKQEKEDLIEALKEENDGKL 230
V++F S+ + A L+ RF ++ E L+ E +
Sbjct: 773 TQQVIVFVHSRKETAKTARALRDLCIENDTLGRF-------VRDDSPSTEVLRSEAENCK 825
Query: 231 STNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRD 290
+T+L+E + YG A HHA + +R L+EE + + ++ T+TLA GVNLPA RVII+
Sbjct: 826 NTDLKELLPYGFAIHHAGMNRADRTLVEELFADRHIPVLISTATLAWGVNLPAHRVIIKG 885
Query: 291 SYV-----GRDFISLNMYK--QMVGRAGRTGLQESGESIMLCKTMQDFLRFS-SMMNAGP 342
+ + GR ++ L+ QM+GRAGR + GE +++ T D L+F S++N
Sbjct: 886 TQIYNPEKGR-WVELSSMDVMQMIGRAGRPQFDDRGEGVLI--TSHDELQFYLSLLNQQ- 941
Query: 343 EPISSHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQL 385
PI S + L E+V + S + V L LF ++
Sbjct: 942 LPIESQLVSHLPDSLNAEIVLGTIASVKDAVAWLGYTYLFVRM 984
Score = 48.1 bits (113), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 62/125 (49%), Gaps = 13/125 (10%)
Query: 234 LEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS-- 291
L E + GV ++H L+ ER+ + Y G +Q++ L + L A+ VII D+
Sbjct: 1486 LREALSNGVGFYHEGLSMTERQTVRGLYEVGAIQVLVVVRELCWSLGLSARLVIIYDTQF 1545
Query: 292 YVGRDFISLNM----YKQMVGRAGRTGLQESGESIMLCK-TMQDFL-RFSSMMNAGPEPI 345
Y GR+ +N QM G A + +SG ++LC+ T +DF RF P P+
Sbjct: 1546 YEGRENRYVNYPVADVLQMTG-AANSPSSDSGVCVILCQSTKKDFFKRFLQ----DPLPV 1600
Query: 346 SSHMD 350
S+++
Sbjct: 1601 ESYLN 1605
>gi|396471631|ref|XP_003838915.1| similar to pre-mRNA splicing helicase [Leptosphaeria maculans JN3]
gi|312215484|emb|CBX95436.1| similar to pre-mRNA splicing helicase [Leptosphaeria maculans JN3]
Length = 2219
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 121/472 (25%), Positives = 227/472 (48%), Gaps = 54/472 (11%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V E+ + K E + + E G + TK+Q+ + I + T EK +
Sbjct: 603 LVAEQVGNFGKRLEPYGIKVSELTGDRQL---TKQQIAETQIIVTTPEKYDVITRKATDT 659
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKS----IQIFAMSATIGNINALS 116
+ I+ + LI IDE H+L++ RGP++E +VS+ L + ++I +SAT+ N ++
Sbjct: 660 SYINLVRLICIDEIHLLHD-DRGPVIESIVSRTLRRSEQTGDHVRIVGLSATLPNYRDVA 718
Query: 117 TFI-----EGITYVENS-RPTK-HSEYVTV-DKRVFQSFDGKSLTEI-YADNLDYSLTGS 167
+F+ +G+ + + + RP E++ V DK+ + K++ ++ Y L+
Sbjct: 719 SFLRIDPEKGLFHFDATFRPCPLKQEFIGVTDKKAIKQL--KTMNDVCYTKVLE------ 770
Query: 168 GPDAVLHLVQGNLMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLI--EALKEE 225
+ + +LIF S+ + A ++ D+ + K + D E L+EE
Sbjct: 771 ------QVGEHRNQMLIFVHSRKETAKTAKYIR-DKALEEESIGKILRSDAASREILREE 823
Query: 226 NDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQR 285
+ + +L++ + YG HHA ++ +R +E+ + G++Q++ CT+TLA GVNLPA
Sbjct: 824 AESVQNADLKDLMPYGFGIHHAGMSRADRTSVEDLFADGSIQVLVCTATLAWGVNLPAHT 883
Query: 286 VIIRDSYV----GRDFISLNMYK--QMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMN 339
VII+ + + ++ L+ QM+GRAGR GE I++ T + + S++N
Sbjct: 884 VIIKGTQIYSPEKGSWVELSPQDVLQMLGRAGRPQYDTYGEGIIIT-TKDEIQYYLSLLN 942
Query: 340 AGPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQ-LKSPE--------D 390
PI S +L E+V N+ + E V L LF + L+SP +
Sbjct: 943 QQ-LPIESQFISKLADNLNAEIVLGNVRNRDEAVDWLGYTYLFVRMLRSPALYRVGPEYE 1001
Query: 391 QQTFLETTLSEIV--ASLLASKGTMLTMN-EAGHLSLTSIAKAAVQAGLSHD 439
T LE ++V A+ + K +++ + + G L+ T + + A +SH+
Sbjct: 1002 NDTVLEQRRVDLVHAAAHVLEKCSLIKYDRKTGQLTPTELGRIASHYYISHN 1053
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 76/370 (20%), Positives = 155/370 (41%), Gaps = 44/370 (11%)
Query: 35 RQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKV- 93
R L+K + + T + L + + + L++ DE HML G + E VVS++
Sbjct: 1477 RLLDKGDLILATPSQWDSLSRQWQRRKNVQSVALLIADELHMLGGIG-GHVYEIVVSRMQ 1535
Query: 94 ---LYLKKSIQIFAMSATIGNINALSTFIEGITY-VENSRPTKHSEYVTVDKRVFQSFDG 149
L+ ++I +S ++ N + +I + + N P + + + + F
Sbjct: 1536 AMAAQLESKLRIVGLSVSLSNARDIGEWIGANKHTIYNFSPAIRAVPLELKIQSFTIPHF 1595
Query: 150 KSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRL--------QF 201
SL A ++T PD ++F ++ N A L
Sbjct: 1596 PSLMMAMARPTYLAITQMSPDKP---------AMVFVPNRKQARNSAADLYNACVADEDD 1646
Query: 202 DRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAY 261
DRF E +++ L++ N+ L+T+L +G+ Y H L + +++ ++ +
Sbjct: 1647 DRFLNV------ELDEIKPILEKVNEQALATSLS----HGIGYFHEALNSFDKKAVQHLF 1696
Query: 262 LAGTLQIICCTSTLAAGVNLPAQRVIIRDS--YVGRDF----ISLNMYKQMVGRAGRTGL 315
G +Q++ + ++ A VI++ + Y GR+ ++ QM G+AGR G
Sbjct: 1697 KVGAIQVLIVSRDSCWEIDGGAHLVIVQGTQFYEGREHRYVDYPISDILQMFGKAGRVGQ 1756
Query: 316 QESGESI-MLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAANLCSSLEDVK 374
+S + + ML +++ + +N PI S++ L D + ++A S ++
Sbjct: 1757 DKSAKGVLMLPAVKREY--YKKFLNEA-LPIESYLH-DYLHDAFVAEISAKTIESTQEAV 1812
Query: 375 TLIKHTLFYQ 384
+T FY+
Sbjct: 1813 DWSTYTYFYR 1822
>gi|172087306|ref|XP_001913195.1| U5 small nuclear ribonucleoprotein 200 kDa helicase [Oikopleura
dioica]
gi|48994303|gb|AAT47877.1| U5 small nuclear ribonucleoprotein 200 kDa helicase [Oikopleura
dioica]
Length = 2143
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 116/401 (28%), Positives = 195/401 (48%), Gaps = 48/401 (11%)
Query: 16 FKFYLEEYA----GVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVI 71
FK L++Y + G + TK Q+ + + +CT EK + + + + L++I
Sbjct: 549 FKKRLQKYGIEVNELTGDHQLTKEQIMRTQLIVCTPEKWDIICRKGGERSYTQLVRLVII 608
Query: 72 DEFHMLNEPQRGPILECVVSKVLY----LKKSIQIFAMSATIGNINALSTFI-----EGI 122
DE H+L++ RGP+LE + +++L L ++I +SAT+ N ++ F+ +G+
Sbjct: 609 DEIHLLHD-DRGPVLEALAARILRSVESLNDDVRIVGLSATLPNYMDVAAFLRVDPDDGL 667
Query: 123 TYVENS-RPTKHSEYVTVDKRVFQSFDGKSLTEIYADN-LDYSLTGSGPDAVLHLVQGNL 180
+ +NS RP V + +R + K+L N L Y AV H Q +
Sbjct: 668 FFFDNSYRP------VPLSQRFIGVTEKKALRRYQLMNELCYE------KAVGHAGQKQV 715
Query: 181 MVLIFCSSKIACSNLALR---LQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEEC 237
++ + + A + A+R ++ + G + E L ++ DG NL++
Sbjct: 716 LIFVHSRKETAKTAKAIRDLCMERETIGGFIKEGSASSEILKSEAEQVKDG----NLKDL 771
Query: 238 ILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYV---- 293
+ +G A HHA L +R L+E+ Y +Q++ TSTLA GVNLPA VII+ + V
Sbjct: 772 LPFGFAIHHAGLNRVDRSLVEDLYADKHIQVLVSTSTLAWGVNLPAYCVIIKGTQVYSPE 831
Query: 294 -GRDFISLNMYK--QMVGRAGRTGLQESGESIMLCKTMQDFLRFS-SMMNAGPEPISSHM 349
G+ +I L+ QM+GRAGR +GE I++ T LR+ S+MN PI S M
Sbjct: 832 KGK-WIELSALDVLQMLGRAGRPQYDTTGEGILI--TNHSELRYYLSLMNEQL-PIESQM 887
Query: 350 DPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQL-KSPE 389
L E+V N+ + + V+ + LF ++ K PE
Sbjct: 888 IAKLPDILNGEIVLGNVQNINDAVEWMAYTYLFVRMQKHPE 928
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 63/124 (50%), Gaps = 10/124 (8%)
Query: 234 LEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS-- 291
L E + GV Y H T E ++ + + G +Q++ ++ +NL A VII+D+
Sbjct: 1604 LAETLRNGVGYLHEGSTVKEIDVVSQLFTKGAIQVLVLPHSMTWKLNLTAHTVIIQDTQW 1663
Query: 292 YVGR-----DFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPIS 346
Y GR D+ ++ + M+GRAGR G E G+ I+LC++ F P P+
Sbjct: 1664 YNGRTHSYADYAVTDVLR-MLGRAGRMGEDEEGKCIVLCQS--SKKEFFKKFLFEPLPVE 1720
Query: 347 SHMD 350
SH++
Sbjct: 1721 SHLE 1724
Score = 47.4 bits (111), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 52/98 (53%), Gaps = 7/98 (7%)
Query: 28 GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILE 87
G+ P + L K+ I I T+E+ L Q + + L ++D+ H++ ++GP +E
Sbjct: 1402 GETNPDLKSLAKRGIVISTVERWDVLSRRWKQRKDVQAVKLFIVDDIHLIG-GEKGPAVE 1460
Query: 88 CVVSKVLYL------KKSIQIFAMSATIGNINALSTFI 119
V S++ +L ++ ++I A+ +++ N LS ++
Sbjct: 1461 IVCSRMRFLSTQIEKERPLRILALGSSLANAKELSKWL 1498
>gi|189203875|ref|XP_001938273.1| pre-mRNA splicing factor [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187985372|gb|EDU50860.1| pre-mRNA splicing factor [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 2225
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 110/410 (26%), Positives = 202/410 (49%), Gaps = 43/410 (10%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V E+ + K E + + E G + TK+Q+ + I + T EK +
Sbjct: 602 LVAEQVGNFGKRLEPYGIKVSELTGDRQL---TKQQIAETQIIVTTPEKYDVITRKATDT 658
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKS----IQIFAMSATIGNINALS 116
+ I+ + LI IDE H+L++ RGP++E +VS+ L + ++I +SAT+ N ++
Sbjct: 659 SYINLVRLICIDEIHLLHD-DRGPVIESIVSRTLRRSEQTGDQVRIVGLSATLPNYRDVA 717
Query: 117 TFI-----EGITYVENS-RPTK-HSEYVTV-DKRVFQSFDGKSLTEI-YADNLDYSLTGS 167
+F+ +G+ + + + RP E++ V DK+ + K++ ++ Y L+
Sbjct: 718 SFLRVDPDKGLFHFDATFRPCPLKQEFIGVTDKKAIKQL--KTMNDVCYTKVLE------ 769
Query: 168 GPDAVLHLVQGNLMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLI--EALKEE 225
+ + +LIF S+ + A ++ D+ + K + D E L+EE
Sbjct: 770 ------QVGEHRNQMLIFVHSRKETAKTAKYIR-DKALEEESIGKILRSDAASREILREE 822
Query: 226 NDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQR 285
++ + +L++ + YG HHA ++ +R +E+ + G++Q++ CT+TLA GVNLPA
Sbjct: 823 SESVQNADLKDLMPYGFGIHHAGMSRADRTSVEDLFADGSIQVLVCTATLAWGVNLPAHT 882
Query: 286 VIIRDSYV----GRDFISLNMYK--QMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMN 339
VII+ + + ++ L+ QM+GRAGR GE I++ T + + S++N
Sbjct: 883 VIIKGTQIYSPEKGSWVELSPQDVLQMLGRAGRPQYDTYGEGIIIT-TQAEIQYYLSLLN 941
Query: 340 AGPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQ-LKSP 388
PI S + +L EVV N+ + E V L LF + L+SP
Sbjct: 942 QQ-LPIESQLVSKLADNLNAEVVLGNVRNRDEAVDWLGYTYLFVRMLRSP 990
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 82/399 (20%), Positives = 164/399 (41%), Gaps = 53/399 (13%)
Query: 15 EFKFYLEEYAGVKGQYPPTK---------RQLNKKSIYICTIEKGSKLIGSLIQENRIDE 65
++K + E +G+ G K R L K + + T + L + +
Sbjct: 1447 QYKNWNERLSGLSGGKDIVKLTGETTADLRLLEKGDLILATPSQWDSLSRQWQRRKNVQS 1506
Query: 66 IGLIVIDEFHMLNEPQRGPILECVVSKV----LYLKKSIQIFAMSATIGNINALSTFIEG 121
+ L++ DE HML G + E VVS++ + ++ ++I ++ ++ N + +I
Sbjct: 1507 VALLIADELHMLGG-SNGHVYEIVVSRMQAMAIQIESKLRIVGLAVSLANARDIGEWIGA 1565
Query: 122 ITY-VENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNL 180
+ + N P + + + + F SL A ++T PD
Sbjct: 1566 TKHTIYNFSPAIRAVPLELKIQSFTIPHFPSLMMAMARPTYSAITQMSPDKP-------- 1617
Query: 181 MVLIFCSSKIACSNLALRL--------QFDRFPGTKEYKKQEKEDLIEALKEENDGKLST 232
+IF ++ N A L DRF + E + ++E + E +
Sbjct: 1618 -AMIFVPNRKQARNSASDLFNACVADENEDRFLNVE---LSEIQPILEKINEHS------ 1667
Query: 233 NLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS- 291
L E + +G+ Y H L ++R ++ + G +Q++ + V+ A V+++ +
Sbjct: 1668 -LAESLSHGIGYFHEALNTFDKRAVQHLFKVGAVQVMIVSRDSCWEVDSSAHLVVVQGTQ 1726
Query: 292 -YVGRDF----ISLNMYKQMVGRAGRTGLQESGESI-MLCKTMQDFLRFSSMMNAGPEPI 345
Y GR+ ++ QM G+AGR G+ +S + + ML +++ + +N PI
Sbjct: 1727 FYEGREHRYVDYPISDILQMFGKAGRVGVDKSAKGVLMLPAVKREY--YKKFLNEA-LPI 1783
Query: 346 SSHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQ 384
SH+ P L D + ++A S ++ +T FY+
Sbjct: 1784 ESHL-PDYLHDAFVAEISAKTIESTQEAVDWSTYTYFYR 1821
>gi|409045837|gb|EKM55317.1| hypothetical protein PHACADRAFT_143494 [Phanerochaete carnosa
HHB-10118-sp]
Length = 880
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 96/310 (30%), Positives = 154/310 (49%), Gaps = 42/310 (13%)
Query: 41 SIYICTIEKGSKLIGSLIQENRI-DEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKS 99
+I + T EK L + + +I +I L +IDE H+LNE RG LE VVS++ S
Sbjct: 117 AIIVTTGEKWDSLTRNWEEHQQILSQITLFLIDEIHILNET-RGSTLEVVVSRMKLRGTS 175
Query: 100 IQIFAMSATIGNINALSTFIEG---------ITYVENSRPTKHSEYVT--VDKRVFQSFD 148
++ A+SAT+ N+ ++ ++ + + E RP K +V + KR F
Sbjct: 176 VRFVAVSATVPNVQDVAAWLGNERNGGSAVIMEFGEEYRPCKIVRHVVPVLKKRDQNDFQ 235
Query: 149 GKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSK---IACSNLALRLQFDRFP 205
+ + LDY L G VL + VLIFC+++ + + + + ++
Sbjct: 236 FQRI-------LDYKLYG-----VLQQYSQDKPVLIFCATRKGNLMMTYVGVVASAEQL- 282
Query: 206 GTKEYKKQ-EKEDLIEALKEENDGKLSTNLEECILY--GVAYHHADLTAGERRLIEEAYL 262
KEY + K D + K G +TN L G+ HHA LT +RR +E+ +L
Sbjct: 283 -MKEYGQSLNKRDRLPWTKP---GGFTTNFSASWLAICGIGIHHAGLTWDDRRAMEDLFL 338
Query: 263 AGTLQIICCTSTLAAGVNLPAQRVIIRDSYV-----GRDFISLNMYKQMVGRAGRTGLQE 317
L++I TSTLA GVNLPA VII+ + +++ L++ QM+GRAGR +
Sbjct: 339 KKVLRVIVATSTLAVGVNLPAHTVIIKGVKIFATDGWQEYSDLDIM-QMMGRAGRPQFDK 397
Query: 318 SGESIMLCKT 327
G +I++C+T
Sbjct: 398 EGVAIIMCET 407
>gi|291396687|ref|XP_002714920.1| PREDICTED: activating signal cointegrator 1 complex subunit 3
[Oryctolagus cuniculus]
Length = 2194
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 108/398 (27%), Positives = 185/398 (46%), Gaps = 53/398 (13%)
Query: 14 EEFKFYLEEYAGVK-----GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGL 68
+++K +EE G K G P + + K + + T EK + S + + ++ +
Sbjct: 1389 DDWKVRIEEKLGKKVIELTGDVTPDMKSIAKADLIVTTPEKWDGVSRSWQNRSYVQQVTI 1448
Query: 69 IVIDEFHMLNEPQRGPILECVVSKVLYL----KKSIQIFAMSATIGNINALSTFIE---- 120
++IDE H+L E +RGP+LE +VS+ ++ +K ++I +S + N L+ ++
Sbjct: 1449 LIIDEIHLLGE-ERGPVLEVIVSRTNFISSHTEKPVRIVGLSTALANARDLADWLNIKQM 1507
Query: 121 GITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNL 180
G+ N RP+ + V Q F G+ A S+ A+
Sbjct: 1508 GLF---NFRPSVRPVPLEVH---IQGFPGQHYCPRMA-----SMNKPAFQAIRSHSPAK- 1555
Query: 181 MVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQ-------EKEDLIEALKEENDGKLSTN 233
VLIF SS+ AL L F T+E KQ E E++I +K+ +N
Sbjct: 1556 PVLIFVSSRRQTRLTALELI--AFLATEEDPKQWLNMDEREMENIIGTVKD-------SN 1606
Query: 234 LEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS-- 291
L+ + +G+ HHA L +R+ +EE ++ +Q++ TSTLA GVN PA VII+ +
Sbjct: 1607 LKLTLAFGIGMHHAGLHERDRKTVEELFVNCKIQVLIATSTLAWGVNFPAHLVIIKGTEY 1666
Query: 292 YVGR-----DFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPIS 346
Y G+ DF ++ QM+GRAGR + G++++L ++ F P P+
Sbjct: 1667 YDGKTRRYVDFPITDVL-QMMGRAGRPQFDDQGKAVILVHDIKK--DFYKKFLYEPFPVE 1723
Query: 347 SHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQ 384
S + L D + +A +S +D I T F++
Sbjct: 1724 SSL-LGVLSDHLNAEIAGGTITSKQDALDYITWTYFFR 1760
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 103/380 (27%), Positives = 177/380 (46%), Gaps = 56/380 (14%)
Query: 33 TKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEI-GLIVIDEFHMLNEPQRGPILECVVS 91
+K ++ + + + T EK + + + + +I L+++DE H+L+E RGP+LE +V+
Sbjct: 570 SKNEILRTQMLVTTPEKWDVVTRKSVGDVALSQIVKLLILDEVHLLHE-DRGPVLESIVA 628
Query: 92 KVLYLKKS----IQIFAMSATIGNINALSTFIE-----GITYVENS-RPTKHSEYVTVDK 141
+ L +S I+I +SAT+ N ++TF+ G+ Y + RP
Sbjct: 629 RTLRQVESTQSMIRILGLSATLPNYLDVATFLHVNPYIGLFYFDGRFRPVP--------- 679
Query: 142 RVFQSFDG-KSLTEIYA-DNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRL 199
+ Q+F G KS ++ +N+D ++VL V+ V++F ++ A A+ L
Sbjct: 680 -LGQTFLGIKSANKMQQLNNMDEVCY----ESVLKQVKDGHQVMVFVHARNATVRTAMSL 734
Query: 200 --------QFDRFPGTK--EYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADL 249
Q F T+ EY EK+ K N + E G + HHA +
Sbjct: 735 IERAKNCGQISCFLPTQGPEYGHAEKQ----VQKSRN-----KQVRELFPDGFSIHHAGM 785
Query: 250 TAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS--YVGR--DFISLNMYK- 304
+R L+E + G ++++ CT+TLA GVNLPA VII+ + Y + F+ L +
Sbjct: 786 LRQDRNLVENLFSNGHIKVLVCTATLAWGVNLPAHAVIIKGTQIYAAKRGSFVDLGILDV 845
Query: 305 -QMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVA 363
Q+ GRAGR + GE I++ T D L + PI S +L D + +A
Sbjct: 846 MQIFGRAGRPQFDKFGEGIII--TTHDKLSHYLTLLTQQNPIESQF-LESLADNLNAEIA 902
Query: 364 ANLCSSLEDVKTLIKHTLFY 383
+++E+ I +T Y
Sbjct: 903 LGTVTNVEEAVKWISYTYLY 922
>gi|328792791|ref|XP_623928.3| PREDICTED: putative U5 small nuclear ribonucleoprotein 200 kDa
helicase-like [Apis mellifera]
Length = 2126
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 126/507 (24%), Positives = 224/507 (44%), Gaps = 96/507 (18%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEK--------GSK 52
+V E + +K + + E + G + T+ Q+ + +CT EK G K
Sbjct: 541 LVQEMVGTFSKRLSTYNLTVSE---LTGDHQLTREQIAATQVIVCTPEKWDIITRKGGEK 597
Query: 53 LIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLY----LKKSIQIFAMSAT 108
SL++ LI+IDE H+L++ +RGP+LE +V++ + ++ +++ +SAT
Sbjct: 598 TFTSLVR--------LIIIDEIHLLHD-ERGPVLEALVARTIRNIETTQEDVRLIGLSAT 648
Query: 109 IGNINALSTFIE-----GITYVENS-RPTK-HSEYVTV-DKRVFQSFDGKSLTEI-YADN 159
+ N ++ F+ G+ Y +NS RP +Y+ V +K+ + F + + EI Y
Sbjct: 649 LPNYQDVAAFLRIKPESGLFYFDNSFRPVALEQQYIGVTEKKALKRF--QVMNEIVYEKT 706
Query: 160 LDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRL-----------QFDRFPGTK 208
++++ G VL+F S+ A + QF R
Sbjct: 707 MEHA--------------GRNQVLVFVHSRKETGKTARAIRDMCLEKDTLGQFLR----- 747
Query: 209 EYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQI 268
E +E L+ E + + L++ + YG A HHA +T +R L+E+ + +Q+
Sbjct: 748 -----EGSASMEVLRTEAEQVKNQELKDLLPYGFAIHHAGMTRVDRTLVEDLFADRHIQV 802
Query: 269 ICCTSTLAAGVNLPAQRVIIRDSYV-----GRDFISLNMYK--QMVGRAGRTGLQESGES 321
+ T+TLA GVNLPA VII+ + V GR ++ L QM+GRAGR GE
Sbjct: 803 LVSTATLAWGVNLPAHTVIIKGTQVYNPEKGR-WVELGALDVLQMLGRAGRPQYDTKGEG 861
Query: 322 IMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTL 381
I++ + + S++N PI S + + D++ + ++ D T + +T
Sbjct: 862 ILIT-NHSELQYYLSLLNQQL-PIESQL-ISKMSDMLNAEIVLGTIQNIRDAVTWLGYTY 918
Query: 382 FY--QLKSPE----DQQTFLETTLSEI--------VASLLASKGTMLTMNEAGHLSLTSI 427
Y L+ P Q E L E+ A L G + ++G+ T +
Sbjct: 919 LYIRMLRCPNLYGISQDKIKEDALLELHRADLIHSAAVALDRSGLIKYDRKSGNFQATEL 978
Query: 428 AKAAVQAGLSHDVCLIIYSDLLHNKLN 454
+ A +H+ + IY+ LL L+
Sbjct: 979 GRIASHYYCTHE-TMAIYNQLLKRTLS 1004
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 82/335 (24%), Positives = 146/335 (43%), Gaps = 45/335 (13%)
Query: 37 LNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLY- 95
L K I I T +K L Q + I L ++DE ++ + GP+LE S+ Y
Sbjct: 1405 LAKGQIIITTADKWDVLSRRWKQRKNVQNIQLFIVDELQLIG-GEEGPVLEVACSRARYI 1463
Query: 96 ---LKKSIQIFAMSATIGNINALSTFIEG-----ITYVENSRPTKHSEYVTVDKRVFQSF 147
L K +I A+SA++ + + ++ + + RP +V
Sbjct: 1464 SSQLDKPTRIIALSASLADAKDAAQWLGAPAAATFNFHPSVRPVPLELHVQ--------- 1514
Query: 148 DGKSLTEIYADNLDYSLTGSGP--DAVL-HLVQGNLMVLIFCSSKIACSNLALRLQFDRF 204
G ++T N + P +A+L H ++V + + + + L L F
Sbjct: 1515 -GINITH----NASRLAAMAKPVYNAILRHASHKPVIVFVPTRRQARLTAIDL-LTFTAA 1568
Query: 205 PGT-KEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLA 263
G + E+ D+ L D L+E + GVAY H L+ +R L+E+ + +
Sbjct: 1569 EGQPSRFFHAEEADIKPFLDRMTD----KTLKETLSQGVAYLHEGLSVDDRHLVEQLFDS 1624
Query: 264 GTLQIICCTSTLAAGVNLPAQRVIIRDS--YVGR-----DFISLNMYKQMVGRAGRTGLQ 316
G +QI T L G+++ + V++ D+ Y G+ D+ ++ QMV RA R
Sbjct: 1625 GAIQIAVATRDLCWGLSISSHLVVVMDTQCYNGKTHAYEDYPITDVL-QMVARANRPLED 1683
Query: 317 ESGESIMLCK-TMQDFLRFSSMMNAGPEPISSHMD 350
+ + ++LC+ + +DF F +N P P+ SH+D
Sbjct: 1684 DDAKCVLLCQSSKKDF--FKKFLNE-PLPVESHLD 1715
>gi|456367250|ref|NP_001263986.1| activating signal cointegrator 1 complex subunit 3 [Rattus
norvegicus]
Length = 2201
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 107/398 (26%), Positives = 185/398 (46%), Gaps = 53/398 (13%)
Query: 14 EEFKFYLEEYAGVK-----GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGL 68
+++K +EE G K G P + + K + + T EK + S + + ++ +
Sbjct: 1391 DDWKIRIEEKLGKKVIELTGDVTPDMKSIAKADLIVTTPEKWDGVSRSWQNRSYVQQVNI 1450
Query: 69 IVIDEFHMLNEPQRGPILECVVSKVLYL----KKSIQIFAMSATIGNINALSTFIE---- 120
++IDE H+L E +RGP+LE +VS+ ++ +K ++I +S + N L+ ++
Sbjct: 1451 LIIDEIHLLGE-ERGPVLEVIVSRTNFISSHTEKPVRIVGLSTALANARDLADWLNIKQM 1509
Query: 121 GITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNL 180
G+ N RP+ + V Q F G+ A S+ A+
Sbjct: 1510 GLF---NFRPSVRPVPLEVH---IQGFPGQHYCPRMA-----SMNKPAFQAIRSHSPAK- 1557
Query: 181 MVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQ-------EKEDLIEALKEENDGKLSTN 233
VLIF SS+ AL L F T+E KQ E E++I +++ +N
Sbjct: 1558 PVLIFVSSRRQTRLTALELI--AFLATEEDPKQWLNMDEQEMENIIATVRD-------SN 1608
Query: 234 LEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS-- 291
L+ + +G+ HHA L +R+ +EE ++ +Q++ TSTLA GVN PA VII+ +
Sbjct: 1609 LKLTLAFGIGMHHAGLHERDRKTVEELFVNCKVQVLIATSTLAWGVNFPAHLVIIKGTEY 1668
Query: 292 YVGR-----DFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPIS 346
Y G+ DF ++ QM+GRAGR + G++++L ++ F P P+
Sbjct: 1669 YDGKTRRYVDFPITDVL-QMMGRAGRPQFDDQGKAVILVHDIKK--DFYKKFLYEPFPVE 1725
Query: 347 SHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQ 384
S + L D + +A +S +D I T F++
Sbjct: 1726 SSL-LGVLSDHLNAEIAGGTITSKQDALDYITWTYFFR 1762
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 97/373 (26%), Positives = 179/373 (47%), Gaps = 42/373 (11%)
Query: 33 TKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEI-GLIVIDEFHMLNEPQRGPILECVVS 91
+K ++ + + + T EK + + + + +I L+++DE H+L+E RGP+LE +V+
Sbjct: 572 SKSEILRTQMLVTTPEKWDVVTRKSVGDVALSQIVKLLILDEVHLLHE-DRGPVLESIVA 630
Query: 92 KVLYLKKS----IQIFAMSATIGNINALSTFIE-----GITYVENS-RPTKHSEYVTVDK 141
+ L +S I+I +SAT+ N ++TF+ G+ Y + RP
Sbjct: 631 RTLRQVESTQSMIRILGLSATLPNYLDVATFLHVNPYIGLFYFDGRFRPVP--------- 681
Query: 142 RVFQSFDG-KSLTEIYA-DNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRL 199
+ Q+F G KS ++ +N+D ++VL V+ V++F ++ A A+ L
Sbjct: 682 -LGQTFLGIKSANKMQQLNNMDEVCY----ESVLKQVKAGHQVMVFVHARNATVRTAMSL 736
Query: 200 QFDRFPGTKE---YKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRL 256
+R + + + + + ALK+ + + + E G + HHA + +R L
Sbjct: 737 -IERAKNSGQISCFLPTQGPEYGHALKQVQKSR-NKQVRELFSDGFSIHHAGMLRQDRNL 794
Query: 257 IEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS--YVGR--DFISLNMYK--QMVGRA 310
+E + G ++++ CT+TLA GVNLPA VII+ + Y + F+ L + Q+ GRA
Sbjct: 795 VENLFSNGHIKVLVCTATLAWGVNLPAHAVIIKGTQIYAAKRGSFVDLGILDVMQIFGRA 854
Query: 311 GRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAANLCSSL 370
GR + GE I++ T D L + PI S +L D + +A +++
Sbjct: 855 GRPQFDKFGEGIII--TTHDKLSHYLSLLTQQNPIESQF-LESLADNLNAEIALGTVTNV 911
Query: 371 EDVKTLIKHTLFY 383
E+ + +T Y
Sbjct: 912 EEAVKWMSYTYLY 924
>gi|313230043|emb|CBY07747.1| unnamed protein product [Oikopleura dioica]
Length = 2143
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 116/401 (28%), Positives = 195/401 (48%), Gaps = 48/401 (11%)
Query: 16 FKFYLEEYA----GVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVI 71
FK L++Y + G + TK Q+ + + +CT EK + + + + L++I
Sbjct: 549 FKKRLQKYGIEVNELTGDHQLTKEQIMRTQLIVCTPEKWDIICRKGGERSYTQLVRLVII 608
Query: 72 DEFHMLNEPQRGPILECVVSKVLY----LKKSIQIFAMSATIGNINALSTFI-----EGI 122
DE H+L++ RGP+LE + +++L L ++I +SAT+ N ++ F+ +G+
Sbjct: 609 DEIHLLHD-DRGPVLEALAARILRSVESLNDDVRIVGLSATLPNYMDVAAFLRVDPDDGL 667
Query: 123 TYVENS-RPTKHSEYVTVDKRVFQSFDGKSLTEIYADN-LDYSLTGSGPDAVLHLVQGNL 180
+ +NS RP V + +R + K+L N L Y AV H Q +
Sbjct: 668 FFFDNSYRP------VPLSQRFIGVTEKKALRRYQLMNELCYE------KAVGHAGQKQV 715
Query: 181 MVLIFCSSKIACSNLALR---LQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEEC 237
++ + + A + A+R ++ + G + E L ++ DG NL++
Sbjct: 716 LIFVHSRKETAKTAKAIRDLCMERETIGGFIKEGSASSEILKSEAEQVKDG----NLKDL 771
Query: 238 ILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYV---- 293
+ +G A HHA L +R L+E+ Y +Q++ TSTLA GVNLPA VII+ + V
Sbjct: 772 LPFGFAIHHAGLNRVDRSLVEDLYADKHIQVLVSTSTLAWGVNLPAYCVIIKGTQVYSPE 831
Query: 294 -GRDFISLNMYK--QMVGRAGRTGLQESGESIMLCKTMQDFLRFS-SMMNAGPEPISSHM 349
G+ +I L+ QM+GRAGR +GE I++ T LR+ S+MN PI S M
Sbjct: 832 KGK-WIELSALDVLQMLGRAGRPQYDTTGEGILI--TNHSELRYYLSLMNEQL-PIESQM 887
Query: 350 DPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQL-KSPE 389
L E+V N+ + + V+ + LF ++ K PE
Sbjct: 888 IAKLPDILNGEIVLGNVQNINDAVEWMAYTYLFVRMQKHPE 928
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 64/124 (51%), Gaps = 10/124 (8%)
Query: 234 LEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS-- 291
L E + GV Y H T E ++ + + G +Q++ ++ +NL AQ VII+D+
Sbjct: 1604 LAETLRNGVGYLHEGSTVKEIDVVSQLFTKGAIQVLVLPHSMTWKLNLTAQTVIIQDTQW 1663
Query: 292 YVGR-----DFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPIS 346
Y GR D+ ++ + M+GRAGR G E G+ I+LC++ F P P+
Sbjct: 1664 YNGRTHSYADYAVTDVLR-MLGRAGRMGEDEEGKCIVLCQS--SKKEFFKKFLFEPLPVE 1720
Query: 347 SHMD 350
SH++
Sbjct: 1721 SHLE 1724
Score = 47.4 bits (111), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 52/98 (53%), Gaps = 7/98 (7%)
Query: 28 GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILE 87
G+ P + L K+ I I T+E+ L Q + + L ++D+ H++ ++GP +E
Sbjct: 1402 GETNPDLKSLAKRGIVISTVERWDVLSRRWKQRKDVQAVKLFIVDDIHLIG-GEKGPAVE 1460
Query: 88 CVVSKVLYL------KKSIQIFAMSATIGNINALSTFI 119
V S++ +L ++ ++I A+ +++ N LS ++
Sbjct: 1461 IVCSRMRFLSTQIEKERPLRILALGSSLANAKELSKWL 1498
>gi|396492864|ref|XP_003843899.1| hypothetical protein LEMA_P015500.1 [Leptosphaeria maculans JN3]
gi|312220479|emb|CBY00420.1| hypothetical protein LEMA_P015500.1 [Leptosphaeria maculans JN3]
Length = 2020
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 99/366 (27%), Positives = 171/366 (46%), Gaps = 40/366 (10%)
Query: 35 RQLNKKSIYICTIEKGSKLIGSLIQENRIDE-IGLIVIDEFHMLNEPQRGPILECVVSKV 93
R + +I I T EK + ++ I L +IDE H+L E RG +LE VVS+
Sbjct: 813 RNVQTANIIITTPEKWDSVTRKWKDHEKLMRLIKLFLIDEVHILKE-NRGAVLEVVVSRT 871
Query: 94 LYLKKSIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEY------VTVDKRVFQSF 147
+ ++ A+SAT+ N + ++ ++ G +E P + ++ V + K V
Sbjct: 872 KSIATDVRFVALSATVPNFHDVAVWL-GKNTMEPDVPAANEKFGEEFRPVKLQKHVCGYV 930
Query: 148 DGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSK---IACSNLALRLQFDRF 204
+S + +D L P + + +G ++IFC+++ I + L
Sbjct: 931 SNQSNDFAFEKFIDKKL----PGVIANYSEGK-PIMIFCATRKSTIHTAKLIANWWMSTP 985
Query: 205 PGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAG 264
++ + +K ++ + L E + G+A+HHA L +R IE++++AG
Sbjct: 986 DRSRFWYPPQKPPMMS----------NKELSEVVSSGIAFHHAGLDHNDRVQIEKSFIAG 1035
Query: 265 TLQIICCTSTLAAGVNLPAQRVIIRD--SYVGR---DFISLNMYKQMVGRAGRTGLQESG 319
L +ICCTSTLA GVNLP VII++ S+ + ++ L M QM+GRAGR +S
Sbjct: 1036 ELNVICCTSTLAVGVNLPCHLVIIKNTVSFTEKGMQEYSDLEMM-QMLGRAGRPQFDDSA 1094
Query: 320 ESIMLCKTMQDFLRFSSMMNAGPEPISS--HMDPPTLVDLILEVVAANLCSSLEDVKTLI 377
++++ T Q MM G E + S H++ L+D + + S L + +
Sbjct: 1095 VAVIM--TRQAKAHRYEMMVTGEELLESKLHLN---LIDHMNAEIGLGTISDLVSARKWL 1149
Query: 378 KHTLFY 383
K T Y
Sbjct: 1150 KRTFLY 1155
>gi|448449560|ref|ZP_21591785.1| DEAD/DEAH box helicase [Halorubrum litoreum JCM 13561]
gi|445813189|gb|EMA63170.1| DEAD/DEAH box helicase [Halorubrum litoreum JCM 13561]
Length = 666
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 104/389 (26%), Positives = 168/389 (43%), Gaps = 42/389 (10%)
Query: 28 GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE--NRIDEIGLIVIDEFHMLNEPQRGPI 85
G + T L + + T EK + S I+ + +DE+ +V+DE H+L +RGP
Sbjct: 97 GDFDATGEALAGNDVVVATSEK----VDSAIRNGASWVDELACVVVDEVHLLGAKRRGPT 152
Query: 86 LECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQ 145
LE ++ + +Q A+SAT+ N +A++ +++ RP V V V
Sbjct: 153 LEVTLATLRRRNPELQTVALSATVDNPDAIADWLDAELVESEWRPVDLRTGVAVGGEV-- 210
Query: 146 SFD-GKSLT-----------------------EIYADNLDYSLTGSGPDAVLHLVQGNLM 181
+FD G SL+ D D + + A G
Sbjct: 211 AFDDGTSLSVDVGSIADGADGEGDDGGDAGEVGDAGDANDPTEVTAALVADAVADGGQC- 269
Query: 182 VLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLST-NLEECILY 240
L F S+ +LA RL D E ++ + DG L+ L +C+
Sbjct: 270 -LAFVRSRREAVDLAERLADDGL--AAELGVEDAAAAAAEEATDVDGTLTGRQLADCLRA 326
Query: 241 GVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYV----GRD 296
GVA+HHA L +G R ++E A+ + IC T TLAAG+N+PA+RV++RD G
Sbjct: 327 GVAFHHAGLRSGHRGVVESAFRERDVACICATPTLAAGINVPARRVVVRDQRRYGEGGMS 386
Query: 297 FISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHM-DPPTLV 355
+I QM GRAGR GL GE++++ + PE + S + DP L
Sbjct: 387 WIPTLEVHQMCGRAGRPGLDPHGEAVLVADADTRDEVHERYVEGEPEAVESQLADPAALR 446
Query: 356 DLILEVVAANLCSSLEDVKTLIKHTLFYQ 384
+L VA ++ ++ + + T + +
Sbjct: 447 THVLAAVATGFAATETEILDVFEGTFYAR 475
>gi|291001131|ref|XP_002683132.1| U5 snRNP-specific spliceosomal protein [Naegleria gruberi]
gi|284096761|gb|EFC50388.1| U5 snRNP-specific spliceosomal protein [Naegleria gruberi]
Length = 2057
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 107/412 (25%), Positives = 202/412 (49%), Gaps = 49/412 (11%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V E +L++ + + ++E G + TK+Q+++ I + T EK +
Sbjct: 465 LVQEVVGNLSERLKPYNIVVQELTGDRNM---TKQQIDETQIIVTTPEKWDIVTRKSGDR 521
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKS----IQIFAMSATIGNINALS 116
++++ LI+IDE H+L++ +RGP+LE +V++ + ++S I++ +SAT+ N ++
Sbjct: 522 TYVEKVKLIIIDEIHLLHD-ERGPVLESIVARTIRQQESTRQNIRLVGLSATLPNYKDVA 580
Query: 117 TFI----EGITYVENS-RPTKHSEYV--TVDKRVFQSFDGKSLTEIYADNLDYSLTGSGP 169
TF+ + + Y ++S RP +Y +K+ F+ K + EI + +
Sbjct: 581 TFLRVKPDNLFYFDSSFRPCPLDQYYIGVNEKKPFKRH--KLMNEIVYNKVVE------- 631
Query: 170 DAVLHLVQGNLMVLIFCSS-----KIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKE 224
+ G +++F S K A + + ++ D + E L EA ++
Sbjct: 632 ------IAGKHQIIVFVHSRKDTYKTAKALRDMAIENDTIGKFVKQGSATSEILKEASQK 685
Query: 225 ENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQ 284
+ +G L+E + +GV HHA +T +R L+E+ + LQ++ T+TLA GVNLPA+
Sbjct: 686 DANG---AELKELLSFGVGIHHAGMTRNDRTLVEDLFDDERLQVLVSTATLAWGVNLPAR 742
Query: 285 RVIIRDSYV----GRDFISLNMYK--QMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMM 338
RVII+ + V D+ L+ QM+GRAGR GE +++ T Q L++ +
Sbjct: 743 RVIIKGTQVYSPEKGDWTELSALDVMQMIGRAGRFPRDSRGEGLIV--TTQSHLQYYLAL 800
Query: 339 NAGPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFY--QLKSP 388
PI S +L EVV + ++++ + +T Y L++P
Sbjct: 801 LNQQLPIESQFIKSLPDNLNAEVVLGTV-QNIDEAINWLGYTYLYVRMLRNP 851
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 145/320 (45%), Gaps = 74/320 (23%)
Query: 66 IGLIVIDEFHMLNEPQRGPILECVVSKVLY----LKKSIQIFAMSATIGNINALSTFIEG 121
+ L+V DE HM+ + GPI+E V+S++ Y L+ +I+I +SA+I N ++ +I
Sbjct: 1366 VKLVVADELHMIG-GEVGPIIEVVISRIRYMSSQLETNIRIVGLSASILNAKDVADWIG- 1423
Query: 122 ITYVE---NSRPTKHSEYVTVDKRVF--QSFDGKSLTEIYADNLDYSLTGSGPD-AVLHL 175
T E N P S + ++ + F S++ + + S P V+
Sbjct: 1424 -TKKECCFNFHPRYRSIPLEINIQGFTQSSYNARQVA------------MSKPAYKVIKQ 1470
Query: 176 VQGNLMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKL----- 230
G +IF SS S ++ DLI+ L + + K+
Sbjct: 1471 KSGGEQTIIFTSSPKQASFIS-------------------SDLIDHLSNDINSKIFVGDS 1511
Query: 231 -----------STNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGV 279
S+ L+E + +G+A++H LT +++++EE Y G ++++ T + G+
Sbjct: 1512 SAINHAIGSVDSSALKEVLTFGIAFYHETLTKNDKQIVEELYSTGVIKVLVVTHQMCWGM 1571
Query: 280 NLPAQRVIIRDS--YVGR-----DFISLNMYKQMVGRAGRTGLQESGESIMLC-KTMQDF 331
++ VII + Y G+ D+ ++M QM+ R+GR + + + C + +D+
Sbjct: 1572 EQKSKLVIIMGTEYYNGKEHRYTDYSIIDMV-QMMSRSGRIAVDKDSTCYIFCAASRKDY 1630
Query: 332 -LRFSSMMNAGPEPISSHMD 350
L+F P P+ SH+D
Sbjct: 1631 LLKFL----YEPFPVESHLD 1646
>gi|15227913|ref|NP_181756.1| U5 small nuclear ribonucleoprotein helicase [Arabidopsis thaliana]
gi|2673917|gb|AAB88651.1| putative ATP-dependent RNA helicase [Arabidopsis thaliana]
gi|330255004|gb|AEC10098.1| U5 small nuclear ribonucleoprotein helicase [Arabidopsis thaliana]
Length = 2172
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 136/513 (26%), Positives = 229/513 (44%), Gaps = 83/513 (16%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V E SL++ ++F ++E +G + T +++ + I + T EK +
Sbjct: 572 LVAEVVDSLSQRLKDFGVTVKELSGDQSL---TGQEIKETQIIVTTPEKWDIITRKSGDR 628
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLY----LKKSIQIFAMSATIGNINALS 116
+ L++IDE H+L++ RGP+LE +V++ L K+ I++ +SAT+ N + ++
Sbjct: 629 TYTQLVRLLIIDEIHLLDD-NRGPVLESIVARTLRQIESTKEHIRLVGLSATLPNCDDVA 687
Query: 117 TFIE-----GITYVENS-RPTK-HSEYVTVDK----RVFQSFDGKSLTEIYADNLDYSLT 165
+F+ G+ + S RP +Y+ ++ R FQ + ++ A
Sbjct: 688 SFLRVDLKNGLFIFDRSYRPVPLGQQYIGINVKKPLRRFQLMNDICYQKVVA-------- 739
Query: 166 GSGPDAVLHLVQGNLMVLIFCSSK--IACSNLALR---LQFDRFPGTKEYKKQEKEDL-- 218
V G VLIF S+ A + A+R + D + Q +E L
Sbjct: 740 ----------VAGKHQVLIFVHSRKETAKTARAIRDTAMANDTLSRFLKEDSQSREILKC 789
Query: 219 IEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAG 278
+ L + ND L+E + YG A HHA LT +R ++E + G LQ++ T+TLA G
Sbjct: 790 LAGLLKNND------LKELLPYGFAIHHAGLTRTDREIVENQFRWGNLQVLISTATLAWG 843
Query: 279 VNLPAQRVIIRDSYVGR----DFISLNMYK--QMVGRAGRTGLQESGESIMLC--KTMQD 330
VNLPA VII+ + V +++ L+ QM+GRAGR + GE I++ +Q
Sbjct: 844 VNLPAHTVIIKGTQVYNPERGEWMELSPLDVMQMIGRAGRPQYDQQGEGIIITGYSKLQY 903
Query: 331 FLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKTL---------IKHTL 381
+LR +MN PI S L E+V + ++ E L +++
Sbjct: 904 YLR---LMNEQL-PIESQFISKLADQLNAEIVLGTIQNAREACHWLGYTYLYVRMVRNPT 959
Query: 382 FYQLKSPEDQQTFLETTLSEIVASLLASKGTMLTMN-------EAGHLSLTSIAKAAVQA 434
Y + SP+ L L E A L+ S T+L N ++GH +T + + A
Sbjct: 960 LYGV-SPDALAKDL--LLEERRADLIHSAATILDKNNLIKYDRKSGHFQVTDLGRIASYY 1016
Query: 435 GLSHDVCLIIYSDL--LHNKLNFCLLNSLHMLF 465
+SH +L N + C L SL F
Sbjct: 1017 YISHGTIAAYNENLKPTMNDIELCRLFSLSEEF 1049
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 136/316 (43%), Gaps = 53/316 (16%)
Query: 37 LNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYL 96
L K I I T EK L Q I ++ L ++DE H++ Q G +LE +VS++ Y+
Sbjct: 1445 LEKGQIIISTPEKWDALSRRWKQRKYIQQVSLFIVDELHLIG-GQGGQVLEVIVSRMRYI 1503
Query: 97 KKS----IQIFAMSATIGNINALSTFIEG-----ITYVENSRPTKHSEYV-TVDKRVFQS 146
I+I A+S ++ N L +I + N RP ++ VD S
Sbjct: 1504 SSQVGNKIRIVALSTSLANAKDLGEWIGASSCGVFNFPPNVRPVPLEIHIHGVD---ILS 1560
Query: 147 FDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSK----------IACSNLA 196
F+ + ++T A++ + ++F ++ IA S++
Sbjct: 1561 FEARM----------QAMTKPTYTAIVQHAKNKKPAIVFVPTRKHVRLTAVDLIAYSHMD 1610
Query: 197 LRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRL 256
D G E E E + + EE L+E + +G+ Y H L+ ++ +
Sbjct: 1611 NMKSPDFLLGNLE----ELEPFLIQICEET-------LKETLRHGIGYLHEGLSNLDQEI 1659
Query: 257 IEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS--YVGR-----DFISLNMYKQMVGR 309
+ + + AG +Q+ +S+L G L A V++ + Y GR D+ N+ QM+GR
Sbjct: 1660 VTQLFEAGRIQVCVMSSSLCWGTPLKAHLVVVMGTHFYDGRENSHSDYPISNLL-QMMGR 1718
Query: 310 AGRTGLQESGESIMLC 325
R L ++G+ ++ C
Sbjct: 1719 GSRPLLDDAGKCVIFC 1734
>gi|403342671|gb|EJY70660.1| hypothetical protein OXYTRI_08478 [Oxytricha trifallax]
Length = 2187
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 125/482 (25%), Positives = 223/482 (46%), Gaps = 72/482 (14%)
Query: 33 TKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSK 92
TK Q+++ I + T EK + +D + LI+IDE H+L++ RGP+LE +V++
Sbjct: 597 TKAQIDETQIIVTTPEKWDIITRKSGDRAFLDLVKLIIIDEVHLLHD-SRGPVLEAIVAR 655
Query: 93 VLY----LKKSIQIFAMSATIGNINALSTFIE-----GITYVENS-RPTKHSE-YVTV-D 140
+ ++I+I A+SAT+ N ++ F+ G+ +NS RP + YV + +
Sbjct: 656 TIRQIENTSENIRIVALSATLPNYQDVAAFLRVRPETGLHQFDNSFRPVPLEQIYVGITE 715
Query: 141 KRVFQSFDGKSLTEI-YADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLA--- 196
K+ + + E+ Y ++ + G +LIF S+ + A
Sbjct: 716 KKAIKRL--MLMNEVCYEKVMERA--------------GKHQILIFVHSRKETARTAKII 759
Query: 197 -----LRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTA 251
+ + +F G + K + L +E+ S ++++ + YG+ HHA L
Sbjct: 760 RDMALAKDELHKFIGEQSLTK-------DLLDQESQNAQSIDMKDLLPYGLGIHHAGLAR 812
Query: 252 GERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYV-----GRDFISLNMYK-- 304
+R ++E+ + AG LQ++ T+TLA GVNLPA VII+ + + G+ +I L+
Sbjct: 813 KDRLMVEQLFAAGHLQVLVSTATLAWGVNLPAHTVIIKGTQIYSPEQGK-WIELSPQDML 871
Query: 305 QMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAA 364
QM+GRAGR GE I++ + L++ +N PI S + L EVV
Sbjct: 872 QMMGRAGRPQYDTLGEGIIITNYSE--LQYHLSLNNQQLPIESQLITQLPDQLNAEVVLG 929
Query: 365 NLCSSLEDVKTLIKHTLFYQ-LKSPE---------DQQTFLETTLSEIV--ASLLASKGT 412
+ + E + L L+ + L++P + L ++++ A+L+ SK
Sbjct: 930 TVSNVKEAINWLGYSYLYIRMLRAPSLYGIDEAEIQRDPLLVQRRADLIHTAALMLSKAQ 989
Query: 413 MLTMN-EAGHLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHML---FLVI 468
M+ + G L T+I K A + H + IY++ L +N + L L F I
Sbjct: 990 MIKYDRRTGALQSTAIGKVASHYYIKHS-SMSIYNENLKQYMNIIDVFRLFALSKEFQFI 1048
Query: 469 PL 470
P+
Sbjct: 1049 PI 1050
>gi|258575665|ref|XP_002542014.1| hypothetical protein UREG_01530 [Uncinocarpus reesii 1704]
gi|237902280|gb|EEP76681.1| hypothetical protein UREG_01530 [Uncinocarpus reesii 1704]
Length = 2220
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 123/474 (25%), Positives = 220/474 (46%), Gaps = 52/474 (10%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V E+ + K E + + E G + TK+Q+ + + T EK +
Sbjct: 608 LVQEQVGNFGKRLEPYGIKVSELTGDRQL---TKQQIADTQVIVTTPEKWDIITRKATDT 664
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKS----IQIFAMSATIGNINALS 116
+ + LI+IDE H+L++ +RGP+LE +VS+ + + +++ +SAT+ N +
Sbjct: 665 SYTRLVRLIIIDEIHLLHD-ERGPVLESIVSRTIRRTEQTGDPVRLVGLSATLPNYRDVG 723
Query: 117 TF-----IEGITYVENS-RPTK-HSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGP 169
+F I G+ + + S RP E++ V ++ K++ ++ N D T
Sbjct: 724 SFLRVDPINGLFHFDGSYRPCPLKQEFIGVTEK-------KAIKQLKTMN-DVCYT---- 771
Query: 170 DAVLHLVQGNL-MVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEA--LKEEN 226
VL V N +LIF S+ + A R D+ + + + D L EE
Sbjct: 772 -KVLEQVGTNKNQMLIFVHSRKDTAKTA-RYIRDKAVEMETIGQILRSDAASRAILSEEA 829
Query: 227 DGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRV 286
+ +L++ + YG HHA ++ +R +E+ + G+LQ++ CT+TLA GVNLPA V
Sbjct: 830 ESVNDPSLKDLMPYGFGIHHAGMSKADRTSVEDLFADGSLQVLVCTATLAWGVNLPAHTV 889
Query: 287 IIRDSYV----GRDFISLNMYK--QMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNA 340
II+ + V ++ L+ QM+GRAGR GE I++ T + + S++N
Sbjct: 890 IIKGTQVYSPEKGSWVELSPQDVLQMLGRAGRPQYDSFGEGIIIT-TQAELQYYLSLLNQ 948
Query: 341 GPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQL-KSP---------ED 390
PI S + +L EVV N+ + E V+ L LF ++ +SP E+
Sbjct: 949 Q-LPIESQLMSKLADNLNAEVVLGNIRNRDEGVEWLGYTYLFVRMIRSPGLYSVGADYEN 1007
Query: 391 QQTFLETTLSEI--VASLLASKGTMLTMNEAGHLSLTSIAKAAVQAGLSHDVCL 442
+ + + I A++L + G + ++G L T + + A ++H L
Sbjct: 1008 DEALEQRRVDLIHSAATVLGNAGLIKYDKQSGKLQSTELGRIASHYYITHSSML 1061
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 91/393 (23%), Positives = 175/393 (44%), Gaps = 40/393 (10%)
Query: 37 LNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYL 96
L++ + + T + L + + + L + DE HML Q G + E VVS++ Y+
Sbjct: 1484 LDQADLVLATPIQWDVLSRQWQRRKNVQAVELFIADELHMLGG-QGGYVYEVVVSRMHYI 1542
Query: 97 ----KKSIQIFAMSATIGNINALSTFIEGITY-VENSRPTKHSEYVTVDKRVFQSFDGKS 151
+ +++I +S + N L ++ + + N P H+ V ++ + +S
Sbjct: 1543 ALQTENNLRIVGLSVPLSNARDLGEWLGAKKHTIYNFSP--HARPVPLELHL------QS 1594
Query: 152 LTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRLQFDRFPGTKEYK 211
T + +L ++ A+L L LIF S+ + AL L E +
Sbjct: 1595 FTIPHFPSLMLAMARPAYLAILQLSPTK-PALIFVPSRKQTRSTALDLVAACIANDAEDR 1653
Query: 212 KQEKE-DLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIIC 270
E D I L + D + L E I +G+ Y+H L+ G++R++ + G +Q++
Sbjct: 1654 FLHTEIDQIAPLLDRIDERA---LAESISHGIGYYHEALSKGDKRIVSHLFKIGAIQVMI 1710
Query: 271 CTSTLAAGVNLPAQRVIIRDS--YVGRD--FISLNMYK--QMVGRAGRTGLQESGESIML 324
+ + + A VI+ ++ + GR+ +I + + QM G+A R +SG+ +++
Sbjct: 1711 ASRDVCWEIEFTAHLVIVMNTQFFDGREHRYIDYPISEILQMFGKASRPLEDQSGKGVLM 1770
Query: 325 CKTMQ-DFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFY 383
++ D+ + +N P+ SH+ L D + ++ SS +D + +T FY
Sbjct: 1771 VPAVKRDY--YKKFLNEA-LPMESHLQ-LYLHDAFVTEISTRTISSTQDAVDWMTYTYFY 1826
Query: 384 Q--LKSPE-------DQQTFLETTLSEIVASLL 407
+ L +P D + L T LSEIV + L
Sbjct: 1827 RRLLANPSYYGLSGLDHEA-LSTFLSEIVENTL 1858
>gi|58268466|ref|XP_571389.1| pre-mRNA splicing factor [Cryptococcus neoformans var. neoformans
JEC21]
gi|134112696|ref|XP_774891.1| hypothetical protein CNBF0560 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50257539|gb|EAL20244.1| hypothetical protein CNBF0560 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57227624|gb|AAW44082.1| pre-mRNA splicing factor, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 2152
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 110/417 (26%), Positives = 200/417 (47%), Gaps = 57/417 (13%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V E+ + +K ++ E + G TK+Q+++ I + T EK +
Sbjct: 552 LVQEQVDAFSKRFSSLGIHVAE---LTGDSQLTKQQISETQIIVTTPEKWDVITRKSTDT 608
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVL----YLKKSIQIFAMSATIGNINALS 116
+ + + LI++DE H+L++ RGP+LE ++S+ + +++ +SAT+ N ++
Sbjct: 609 SYTNLVRLIIVDEIHLLHD-DRGPVLESILSRTIRKMDQTHDDVRVVGLSATLPNYKDVA 667
Query: 117 TFI-----EGITYVENS-RPTK-HSEYVTV-DKRVFQSFDGKSLTEI-YADNLDYSLTGS 167
TF+ +G+ Y + S RP +++ V +K+ + +++ E+ Y L+Y+
Sbjct: 668 TFLRVDPKQGLFYFDASYRPVGLKQQFIGVTEKKAIKRL--QTINEVCYEKVLNYA---- 721
Query: 168 GPDAVLHLVQGNLMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQ-------EKEDLIE 220
G L+F S+ + A L+ KE Q +E LI+
Sbjct: 722 ----------GRSQTLVFVHSRKETAKTAAFLRDTAM--EKETLTQFINPEGASREILIQ 769
Query: 221 ALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVN 280
+ D KL ++ + +G HHA ++ +R +E+ + G +Q++CCT+TLA GVN
Sbjct: 770 EAAQCKDAKL----KDLLPFGFGIHHAGMSREDRTTVEQLFFEGHIQVLCCTATLAWGVN 825
Query: 281 LPAQRVIIRDSYV-----GR-DFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRF 334
LPA VII+ + V G+ +S QM+GRAGR GE I++ + +
Sbjct: 826 LPAHTVIIKGTQVYNPEKGKWSELSPQDVLQMLGRAGRPQFDTYGEGIIIT-NHGELQYY 884
Query: 335 SSMMNAGPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFY--QLKSPE 389
+S+MN PI S + +L E+V N+ + E V+ L +T Y L+SP+
Sbjct: 885 TSLMNQQ-LPIESQFVSRMVDNLNAEIVLGNVRNRDEGVQWL-GYTYLYVRMLESPK 939
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 93/405 (22%), Positives = 169/405 (41%), Gaps = 60/405 (14%)
Query: 37 LNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYL 96
L K + +CT + L + IGL++ DE ++ G E +VS+ Y+
Sbjct: 1423 LRKADVVVCTPSQWDLLSRRWKTRKDVQNIGLLIADELQLIGG-DVGSTYEVIVSRTRYV 1481
Query: 97 KK----SIQIFAMSATIGNINALSTFI-EGITYVENSRPTKHSEYVTVDKRVFQSFDGKS 151
+ + +I A S ++ N L +I G V N P + V QSF+
Sbjct: 1482 SQQTGITTRIVACSVSLSNARDLGDWIGAGSQTVFNFSPAARPLPLEVH---LQSFNVPH 1538
Query: 152 LTEIYADNLDYSLTGSGPDAVLHLVQ--GNLMVLIFCSSKIACSNLALRLQFDRFPGTKE 209
+ L + P A L +V+ + F +S+ C A + E
Sbjct: 1539 FPSLM-------LAMAKP-AYLSMVEHSAGRPTICFVASRKQCKLTANDILTYCLADDDE 1590
Query: 210 YK--KQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQ 267
+ E+EDL L+ +D +L+E + YG+ Y+H L+ +++++ + G ++
Sbjct: 1591 TRFLNVEREDLEPHLERLSD----EDLKETLRYGIGYYHEALSKLDKKIVTTLFEEGAIK 1646
Query: 268 IICCTSTLAAGVNLPAQRVIIRDSYVGRDFISLNMYK----------QMVGRAGRTGLQE 317
++ + A + A VII +G + ++ QM+GRA R +
Sbjct: 1647 VLVASKGTAWSLPATAYMVII----MGVQYFDGQEHRYVDYAIADILQMMGRACRPMIDT 1702
Query: 318 SGESIMLC-KTMQDFLRFSSMMNAGPEPISSHMDPPTLVD-LILEVV---------AANL 366
S +++C +T +DF F +N P+ S + P L D E+V A +
Sbjct: 1703 SSRCVLMCQQTRKDF--FKKFLNEA-LPVESSL-PSYLHDHFNAEIVARTIENKQDAVDW 1758
Query: 367 CSSLEDVKTLIKHTLFYQLK--SP----EDQQTFLETTLSEIVAS 405
C+ + L+++ FY L+ +P E +ETTL+++V S
Sbjct: 1759 CTWTWFYRRLMQNPGFYNLQGTTPTHIGEYLSELVETTLNDLVNS 1803
>gi|260817878|ref|XP_002603812.1| hypothetical protein BRAFLDRAFT_124682 [Branchiostoma floridae]
gi|229289135|gb|EEN59823.1| hypothetical protein BRAFLDRAFT_124682 [Branchiostoma floridae]
Length = 2137
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 115/488 (23%), Positives = 226/488 (46%), Gaps = 59/488 (12%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V E + +K E + + E + G + ++ ++ + +CT EK + +
Sbjct: 547 LVQEMTGNFSKRLESYGITVSE---LTGDHQLSREEIQGSQVIVCTPEKWDIITRKAGER 603
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLY----LKKSIQIFAMSATIGNINALS 116
+ L++IDE H+L++ +RGP+LEC+V++++ ++ I++ +SAT+ N ++
Sbjct: 604 TYTQLVRLLIIDEIHLLHD-ERGPVLECIVARMIRSIETTQEDIRLVGLSATLPNYEDVA 662
Query: 117 TFI-----EGITYVENS-RPTK-HSEYVTV-DKRVFQSFDGKSLTEIYADNLDYSLTGSG 168
TF+ +G+ + +NS RP +Y+ + +K+ + F + + +I + +
Sbjct: 663 TFLRVDPAKGLFFFDNSFRPVPLEQQYIGITEKKAVKRF--QLMNDILYEKV-------- 712
Query: 169 PDAVLHLVQGNLMVLIFCSSKIACSNLALR---LQFDRFPGTKEYKKQEKEDLIEALKEE 225
+ H + ++V + + + A+R L+ D T + +E E L+ E
Sbjct: 713 ---MEHAGKNQVLVFVHSRKETGKTARAIRDMCLEKD----TLGHFLREGSAATEVLRTE 765
Query: 226 NDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQR 285
+ + L++ + YG A HHA +T +R L+E+ + +Q++ T+TLA GVNLPA
Sbjct: 766 AEQAKNQELKDLLPYGFAIHHAGMTRVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHT 825
Query: 286 VIIRDSYV-----GRDFISLNMYK--QMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMM 338
VII+ + V GR ++ L QM+GRAGR GE ++L T L++ +
Sbjct: 826 VIIKGTQVYSPEKGR-WVELGALDVLQMLGRAGRPQYDTKGEGLLL--TSHSELQYYLSL 882
Query: 339 NAGPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKTL---------IKHTLFYQLKSPE 389
P+ S +L EVV + + + V L +++ Y + S
Sbjct: 883 QNQQLPVESQFISKLADNLNAEVVLGTVQNLKDAVHWLGYSYLYIRMLRNPTLYGVSSDT 942
Query: 390 DQQTFLETTLSEIV---ASLLASKGTMLTMNEAGHLSLTSIAKAAVQAGLSHDVCLIIYS 446
LE +++ A+ L + + G+ +T + + A L+HD + Y+
Sbjct: 943 KDDALLEQRRIDLIHTSAATLDKHNLIKYDKKTGNFQVTDLGRIASYYYLTHD-TIATYN 1001
Query: 447 DLLHNKLN 454
LL L+
Sbjct: 1002 QLLKPTLS 1009
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 79/334 (23%), Positives = 159/334 (47%), Gaps = 43/334 (12%)
Query: 37 LNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYL 96
L K +I I T ++ L Q + + L ++DE H++ + GP+LE + S++ Y+
Sbjct: 1418 LAKGNIIISTPDRWDVLSRRWKQRKNVQNVNLFIVDEAHLIG-GENGPVLEVICSRMRYI 1476
Query: 97 ----KKSIQIFAMSATIGNINALSTFIEGIT-----YVENSRPTKHSEYVTVDKRVFQSF 147
++ I+I A+S+++ N ++ ++ T + N RP ++
Sbjct: 1477 ASQIERQIRIVALSSSLSNAKDIAQWLGATTNSTFNFHPNVRPVPLELHIQ--------- 1527
Query: 148 DGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRLQF---DRF 204
G ++T + + +++ A+L +++ S K A L F D+
Sbjct: 1528 -GFNITHTPSRLI--AMSKPAYHAILKHSTKKPVIIFVPSRKQARITAIDILTFAAADQQ 1584
Query: 205 PGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAG 264
P + + ++DL L + +D L+E ++ GVAY H LT E++++++ + AG
Sbjct: 1585 P--QRFLHCTEDDLGPHLSKVSDA----TLKETLVNGVAYMHEGLTDIEKKIVQQLFDAG 1638
Query: 265 TLQIICCTSTLAAGVNLPAQRVIIRDS--YVGR-----DFISLNMYKQMVGRAGRTGLQE 317
+Q++ + L +++ A V++ D+ Y G+ D+ ++ QMVGRA R E
Sbjct: 1639 AIQVVVASRNLCWAISMQAHLVVVMDTQFYNGKIHAYVDYPVTDVL-QMVGRANRPLTDE 1697
Query: 318 SGESIMLCK-TMQDFLRFSSMMNAGPEPISSHMD 350
G+ +++C + +DF F + P P+ SH+D
Sbjct: 1698 DGKCVIMCPASKKDF--FKKFLYE-PLPVESHLD 1728
>gi|355748776|gb|EHH53259.1| hypothetical protein EGM_13865 [Macaca fascicularis]
Length = 1623
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 106/397 (26%), Positives = 184/397 (46%), Gaps = 51/397 (12%)
Query: 14 EEFKFYLEEYAGVK-----GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGL 68
+++K +EE G K G P + + K + + T EK + S + + ++ +
Sbjct: 811 DDWKVRIEEKLGKKVIELTGDVTPDMKSIAKADLIVTTPEKWDGVSRSWQNRSYVQQVTI 870
Query: 69 IVIDEFHMLNEPQRGPILECVVSKVLYL----KKSIQIFAMSATIGNINALSTFIE---- 120
++IDE H+L E +RGP+LE +VS+ ++ +K ++I +S + N L+ ++
Sbjct: 871 LIIDEIHLLGE-ERGPVLEVIVSRTNFISSHTEKPVRIVGLSTALANARDLADWLNIKQM 929
Query: 121 GITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNL 180
G+ N RP+ + V Q F G+ A S+ A+
Sbjct: 930 GLF---NFRPSVRPVPLEVH---IQGFPGQHYCPRMA-----SMNKPAFQAIRSHSPAK- 977
Query: 181 MVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQ-------EKEDLIEALKEENDGKLSTN 233
VLIF SS+ AL L F T+E KQ E E++I +++ +N
Sbjct: 978 PVLIFVSSRRQTRLTALELI--AFLATEEDPKQWLNMDEREMENIIATVRD-------SN 1028
Query: 234 LEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS-- 291
L+ + +G+ HHA L +R+ +EE ++ +Q++ TSTLA GVN PA VII+ +
Sbjct: 1029 LKLTLAFGIGMHHAGLHERDRKTVEELFVNCKVQVLIATSTLAWGVNFPAHLVIIKGTEY 1088
Query: 292 YVG--RDFISLNMYK--QMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISS 347
Y G R ++ + QM+GRAGR + G++++L ++ F P P+ S
Sbjct: 1089 YDGKTRRYVDFPITDVLQMMGRAGRPQFDDQGKAVILVHDIKK--DFYKKFLYEPFPVES 1146
Query: 348 HMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQ 384
+ L D + +A +S +D I T F++
Sbjct: 1147 SL-LGVLSDHLNAEIAGGTITSKQDALDYITWTYFFR 1182
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 91/339 (26%), Positives = 158/339 (46%), Gaps = 41/339 (12%)
Query: 66 IGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKS----IQIFAMSATIGNINALSTFIE- 120
+ L+++DE H+L+E RGP+LE +V++ L +S I+I +SAT+ N ++TF+
Sbjct: 26 VKLLILDEVHLLHE-DRGPVLESIVARTLRQVESTQSMIRILGLSATLPNYLDVATFLHV 84
Query: 121 ----GITYVENS-RPTKHSEYVTVDKRVFQSFDGKSLTEIYA--DNLDYSLTGSGPDAVL 173
G+ + + RP + Q+F G T +N+D + VL
Sbjct: 85 NPYIGLFFFDGRFRPVP----------LGQTFLGIKCTNKMQQLNNMDEVCY----ENVL 130
Query: 174 HLVQGNLMVLIFCSSKIACSNLALRLQFDRFPGTKE---YKKQEKEDLIEALKEENDGKL 230
V+ V++F ++ A A+ L +R + + D + A K+ +
Sbjct: 131 KQVKAGHQVMVFVHARNATVRTAMSL-IERAKNCGHIPFFSPTQGHDYVLAEKQVQRSR- 188
Query: 231 STNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRD 290
+ + E G + HHA + +R L+E + G ++++ CT+TLA GVNLPA VII+
Sbjct: 189 NKQVRELFPDGFSIHHAGMLRQDRNLVENLFSNGHIKVLVCTATLAWGVNLPAHAVIIKG 248
Query: 291 S--YVGR--DFISLNMYK--QMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEP 344
+ Y + F+ L + Q+ GRAGR + GE I++ T D L + P
Sbjct: 249 TQIYAAKRGSFVDLGILDVMQIFGRAGRPQFDKFGEGIII--TTHDKLSHYLTLLTQRNP 306
Query: 345 ISSHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFY 383
I S +L D + +A +++E+ I +T Y
Sbjct: 307 IESQF-LESLADNLNAEIALGTVTNVEEAVKWISYTYLY 344
>gi|207345780|gb|EDZ72488.1| YER172Cp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 1471
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 110/386 (28%), Positives = 184/386 (47%), Gaps = 40/386 (10%)
Query: 24 AGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRG 83
A + G +++Q+++ + + T EK + ++ + L++IDE H+L++ RG
Sbjct: 585 AELTGDSRLSRKQIDETQVLVSTPEKWDITTRNSNNLAIVELVRLLIIDEIHLLHD-DRG 643
Query: 84 PILECVVSKVLYLKKSIQ----IFAMSATIGNINALSTFI----EGITYVENS-RPTKHS 134
P+LE +V++ + K Q I +SAT+ N + F+ EG+ Y ++S RP S
Sbjct: 644 PVLESIVARTFWASKYGQEYPRIIGLSATLPNYEDVGRFLRVPKEGLFYFDSSFRPCPLS 703
Query: 135 E-YVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACS 193
+ + + +R SL ++ A + + + VL + +++F S+ S
Sbjct: 704 QQFCGIKER-------NSLKKLKA------MNDACYEKVLESINEGNQIIVFVHSRKETS 750
Query: 194 NLALRLQFDRFPGTKEYKKQEKEDL--IEALKEENDGKLSTNLEECILYGVAYHHADLTA 251
A L+ ++F K K D + LK E L +L + I G+ HHA LT
Sbjct: 751 RTATWLK-NKFAEENITHKLTKNDAGSKQILKTEAANVLDPSLRKLIESGIGTHHAGLTR 809
Query: 252 GERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYV------GRDFISLNMYKQ 305
+R L E+ + G LQ++ CT+TLA GVNLPA VII+ + V + +S Q
Sbjct: 810 SDRSLSEDLFADGLLQVLVCTATLAWGVNLPAHTVIIKGTDVYSPEKGSWEQLSPQDVLQ 869
Query: 306 MVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAAN 365
M+GRAGR GE I++ + + S++N PI S + +L EVVA N
Sbjct: 870 MLGRAGRPRYDTFGEGIIITD-QSNVQYYLSVLNQQL-PIESQFVSKLVDNLNAEVVAGN 927
Query: 366 L-CSSLEDVKTLIKHTLFY--QLKSP 388
+ C + D + +T Y L SP
Sbjct: 928 IKCRN--DAVNWLAYTYLYVRMLASP 951
>gi|380023710|ref|XP_003695656.1| PREDICTED: putative U5 small nuclear ribonucleoprotein 200 kDa
helicase-like [Apis florea]
Length = 2134
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 126/507 (24%), Positives = 224/507 (44%), Gaps = 96/507 (18%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEK--------GSK 52
+V E + +K + + E + G + T+ Q+ + +CT EK G K
Sbjct: 541 LVQEMVGTFSKRLSTYNLTVSE---LTGDHQLTREQIAATQVIVCTPEKWDIITRKGGEK 597
Query: 53 LIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLY----LKKSIQIFAMSAT 108
SL++ LI+IDE H+L++ +RGP+LE +V++ + ++ +++ +SAT
Sbjct: 598 TFTSLVR--------LIIIDEIHLLHD-ERGPVLEALVARTIRNIETTQEDVRLIGLSAT 648
Query: 109 IGNINALSTFIE-----GITYVENS-RPTK-HSEYVTV-DKRVFQSFDGKSLTEI-YADN 159
+ N ++ F+ G+ Y +NS RP +Y+ V +K+ + F + + EI Y
Sbjct: 649 LPNYQDVAAFLRIKPESGLFYFDNSFRPVALEQQYIGVTEKKALKRF--QVMNEIVYEKT 706
Query: 160 LDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRL-----------QFDRFPGTK 208
++++ G VL+F S+ A + QF R
Sbjct: 707 MEHA--------------GRNQVLVFVHSRKETGKTARAIRDMCLEKDTLGQFLR----- 747
Query: 209 EYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQI 268
E +E L+ E + + L++ + YG A HHA +T +R L+E+ + +Q+
Sbjct: 748 -----EGSASMEVLRTEAEQVKNQELKDLLPYGFAIHHAGMTRVDRTLVEDLFADRHIQV 802
Query: 269 ICCTSTLAAGVNLPAQRVIIRDSYV-----GRDFISLNMYK--QMVGRAGRTGLQESGES 321
+ T+TLA GVNLPA VII+ + V GR ++ L QM+GRAGR GE
Sbjct: 803 LVSTATLAWGVNLPAHTVIIKGTQVYNPEKGR-WVELGALDVLQMLGRAGRPQYDTKGEG 861
Query: 322 IMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTL 381
I++ + + S++N PI S + + D++ + ++ D T + +T
Sbjct: 862 ILIT-NHSELQYYLSLLNQQL-PIESQL-ISKMSDMLNAEIVLGTIQNIRDAVTWLGYTY 918
Query: 382 FY--QLKSPE----DQQTFLETTLSEI--------VASLLASKGTMLTMNEAGHLSLTSI 427
Y L+ P Q E L E+ A L G + ++G+ T +
Sbjct: 919 LYIRMLRCPNLYGISQDKIKEDPLLELHRADLIHSAAVALDRSGLIKYDRKSGNFQATEL 978
Query: 428 AKAAVQAGLSHDVCLIIYSDLLHNKLN 454
+ A +H+ + IY+ LL L+
Sbjct: 979 GRIASHYYCTHE-TMAIYNQLLKRTLS 1004
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 82/335 (24%), Positives = 146/335 (43%), Gaps = 45/335 (13%)
Query: 37 LNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLY- 95
L K I I T +K L Q + I L ++DE ++ + GP+LE S+ Y
Sbjct: 1413 LAKGQIIITTADKWDVLSRRWKQRKNVQNIQLFIVDELQLIG-GEEGPVLEVACSRARYI 1471
Query: 96 ---LKKSIQIFAMSATIGNINALSTFIEG-----ITYVENSRPTKHSEYVTVDKRVFQSF 147
L K +I A+SA++ + + ++ + + RP +V
Sbjct: 1472 SSQLDKPTRIIALSASLADAKDAAQWLGAPAAATFNFHPSVRPVPLELHVQ--------- 1522
Query: 148 DGKSLTEIYADNLDYSLTGSGP--DAVL-HLVQGNLMVLIFCSSKIACSNLALRLQFDRF 204
G ++T N + P +A+L H ++V + + + + L L F
Sbjct: 1523 -GINITH----NASRLAAMAKPVYNAILRHASHKPVIVFVPTRRQARLTAIDL-LTFTAA 1576
Query: 205 PG-TKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLA 263
G + E+ D+ L D L+E + GVAY H L+ +R L+E+ + +
Sbjct: 1577 EGQPSRFFHAEEADIKPFLDRMTD----KTLKETLSQGVAYLHEGLSVDDRHLVEQLFDS 1632
Query: 264 GTLQIICCTSTLAAGVNLPAQRVIIRDS--YVGR-----DFISLNMYKQMVGRAGRTGLQ 316
G +QI T L G+++ + V++ D+ Y G+ D+ ++ QMV RA R
Sbjct: 1633 GAIQIAVATRDLCWGLSISSHLVVVMDTQCYNGKTHAYEDYPITDVL-QMVARANRPLED 1691
Query: 317 ESGESIMLCK-TMQDFLRFSSMMNAGPEPISSHMD 350
+ + ++LC+ + +DF F +N P P+ SH+D
Sbjct: 1692 DDAKCVLLCQSSKKDF--FKKFLNE-PLPVESHLD 1723
>gi|449450199|ref|XP_004142851.1| PREDICTED: probable ATP-dependent DNA helicase HFM1-like [Cucumis
sativus]
gi|449483903|ref|XP_004156727.1| PREDICTED: probable ATP-dependent DNA helicase HFM1-like [Cucumis
sativus]
Length = 1189
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 112/400 (28%), Positives = 189/400 (47%), Gaps = 68/400 (17%)
Query: 65 EIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKS----------IQIFAMSATIGNINA 114
+I L++IDE H+LN+P RG LE +VS++ + ++ ++ A+SATI NI
Sbjct: 233 DIALVLIDEVHLLNDP-RGAALEAIVSRIKMIARNPEMKSSPLSRVRFLAVSATIPNIGD 291
Query: 115 LSTF----IEGIT-YVENSRPTKHSEYVTVDKRVFQSFDGKS--LTEIYADNLDYSLTGS 167
L+ + ++G+ + E RP K + +VF K+ + E N +
Sbjct: 292 LAEWLSVPVQGVKRFGEEMRPVK------LTSKVFGYAPAKNDFMFEKRLQNYIF----- 340
Query: 168 GPDAVLHLVQGNLMVLIFCSSKIACSNLALRLQFD--RFPGTKEY--KKQEKEDLIEALK 223
D ++ +G L+FCS++ A RL F + + K++ E L EA
Sbjct: 341 --DVLMQYSRGK-SALVFCSTRKGAQEAAQRLSQTAMTFGYSNPFIKSKEQLERLREASL 397
Query: 224 EENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPA 283
+D ++ +N ILYGV YH+ L +R LIE +L G +Q+IC T+TLA G+NLPA
Sbjct: 398 SCSDKQMQSN----ILYGVGYHNGGLCLKDRNLIESLFLKGDIQVICTTNTLAHGINLPA 453
Query: 284 QRVIIRDS---------YVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRF 334
VII+ + Y+ D ++ QM GRAGR ++G I++ T +D +
Sbjct: 454 HTVIIKSTQHFNKEKGLYMEYDRSTI---LQMCGRAGRPPFDDTG--IVIIMTRRDTVHL 508
Query: 335 SSMMNAGPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQL-KSPE---- 389
+ G E + S + L E+V + ++ ++ + LF ++ K+P+
Sbjct: 509 YENLLNGCEIVESQLLSCVTEHLTAEIVQMTIPDIIKAIEWMKCSYLFVRMKKNPQKYAI 568
Query: 390 -------DQQTFLETTLSEIVASLLASKGTMLTMNEAGHL 422
+ + +E E V L S+ M+ M+E G L
Sbjct: 569 RNGIPNHNMEKHMEDICIEKVNEL--SRHQMIWMDEDGFL 606
>gi|340058606|emb|CCC52966.1| putative DEAD/DEAH box RNA helicase [Trypanosoma vivax Y486]
Length = 2150
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 109/413 (26%), Positives = 194/413 (46%), Gaps = 55/413 (13%)
Query: 26 VKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPI 85
+ G P + L + I T EK L + + + L++ DE HML RGPI
Sbjct: 1372 LSGDITPDIQALVQADILCTTPEKWDGLSRNWQVRRYVTAVRLVIFDEIHMLGS-DRGPI 1430
Query: 86 LECVVSKVLYL----KKSIQIFAMSATIGNINALSTFIEGITY---VENSRPTKHSEYVT 138
LE +VS++ Y+ I++ +S + N LS+++ G+ + V N P+
Sbjct: 1431 LEVIVSRMRYIGWHRNAPIRLIGLSTAVANPVDLSSWL-GVQHKWAVFNFHPSVRP---- 1485
Query: 139 VDKRVFQS-FDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSK-------I 190
V RV+ S + GK+ A ++ +A+ N V++F SS+ +
Sbjct: 1486 VPMRVYISGYHGKNYCPRMA-----TMNKPVYNAICEK-SPNKPVIVFVSSRRQTRLTAM 1539
Query: 191 ACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLT 250
A + L Q T ++ + + E++ E +++ +D ++ C+ +GV HHA L
Sbjct: 1540 AIISFLLMEQ-----NTAKFVRMDVEEVTELVEKISD----PYVKHCLQFGVGIHHAGLL 1590
Query: 251 AGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS--YVGRD--FISLNMYK-- 304
+R ++E A+ +G LQI+ TSTLA GVNLPA V+++ + Y G+ ++ +
Sbjct: 1591 QSDRTIVESAFASGKLQILVATSTLAWGVNLPAHMVVVKGTEFYDGKSKTYVDYQVTDVL 1650
Query: 305 QMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAA 364
QMVGRAGR G + +LC + + N P P+ S + + + E+VA
Sbjct: 1651 QMVGRAGRPQFDTDGVAQILCHEPKKGFYHKFLYN--PFPVESVLHTQLGIHINAEIVAG 1708
Query: 365 NLCSSLEDV---------KTLIKHTLFYQL--KSPEDQQTFLETTLSEIVASL 406
+ + + V + L+K+ +Y + +SP+ FL + +S ++A L
Sbjct: 1709 TITTRQDAVDYLTWTYMFRRLVKNPSYYGVEDRSPKSITIFLSSLVSSVLAEL 1761
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 110/384 (28%), Positives = 174/384 (45%), Gaps = 62/384 (16%)
Query: 33 TKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSK 92
TK +L + + + T EK + E+ + + GLI+IDE H+LNE RG ++E +V++
Sbjct: 522 TKHELAQTQLIVTTPEKWDVITRKRSNEDVVMKPGLIIIDEVHLLNE-DRGAVIEAIVAR 580
Query: 93 VLYL-------KKSIQIFAMSATIGNINALSTFI-----EGI-TYVENSRPTKHSEYVTV 139
L K+ ++ +SAT+ N ++ F+ EG+ + RP
Sbjct: 581 TLRQDELDGSQNKATRLVGLSATLPNYRDVARFLHVDLTEGLKVFGPEYRPVP------- 633
Query: 140 DKRVFQSFDGKSLT----EIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNL 195
+ Q+F G E D L Y + V V+ V++F S+ +L
Sbjct: 634 ---LEQTFIGLRTNVKDQERQMDLLAY-------EEVARNVREGHQVMVFVHSRKQTVSL 683
Query: 196 ALRLQFDRFPGTKEYKKQEKEDLI--EALKEENDGKLSTNLE-----ECILYGVAYHHAD 248
A RL D E +K+ +E L EA + K+ +L+ G HHA
Sbjct: 684 A-RLFVD------ESRKRGQESLFKPEATLPKEVMKVGGSLQGRDLGNLFTAGFGVHHAG 736
Query: 249 LTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYV------GRDFISLNM 302
L +R IE + G L+++ CTSTLA GVNLPA VIIR +++ G IS+
Sbjct: 737 LIRHDRTSIENLFRDGHLKVLVCTSTLAWGVNLPAHTVIIRGTHLYDPQRGGLVPISVLD 796
Query: 303 YKQMVGRAGRTGLQESGESIMLC--KTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILE 360
Q+ GRAGR SG +++ K + +LR + NA PI S + L E
Sbjct: 797 VMQIFGRAGRPQYDTSGHGVIIANEKDVSHYLRL--LANA--LPIESRLQESLCDHLNAE 852
Query: 361 VVAANLCSSLEDVKTLIKHTLFYQ 384
+ A + S +E + L ++T +Q
Sbjct: 853 IQAGTISSVVEGSRWL-EYTYLWQ 875
>gi|425779386|gb|EKV17450.1| Pre-mRNA splicing helicase, putative [Penicillium digitatum PHI26]
gi|425784100|gb|EKV21899.1| Pre-mRNA splicing helicase, putative [Penicillium digitatum Pd1]
Length = 2223
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 127/507 (25%), Positives = 231/507 (45%), Gaps = 60/507 (11%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V E+ +L K E + + E G + TK+Q+ I + T EK + +
Sbjct: 595 LVQEQVGNLGKRLEPYGIRVSELTGDRQL---TKQQIADTQIIVTTPEKYDVITRKATET 651
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVL----YLKKSIQIFAMSATIGNINALS 116
+ + + L+VIDE H+L++ +RGP++E +VS+ + + ++I +SAT+ N +
Sbjct: 652 SYTNLVRLVVIDEIHLLHD-ERGPVIESIVSRTIRKTEQTGEPVRIVGLSATLPNYRDVG 710
Query: 117 TF-----IEGITYVENS-RPTK-HSEYVTV-DKRVFQSFDGKSLTEI-YADNLDYSLTGS 167
+F ++GI + + S RP E++ V +K+ + K++ +I Y ++
Sbjct: 711 SFLRADPVKGIFHFDGSYRPCPLKQEFIGVTEKKAIKQL--KTMNDICYTKVME------ 762
Query: 168 GPDAVLHLVQGNLMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEA--LKEE 225
+ Q +LIF S+ + A ++ D+ + + + D L EE
Sbjct: 763 ------QVGQNRNQMLIFVHSRKETAKTAKYIR-DKALENETIGQILRSDAASRAILSEE 815
Query: 226 NDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQR 285
D NL++ + YG+ HHA L+ +R ++ + G++Q++ CT+TLA GVNLPA
Sbjct: 816 ADSVDDANLKDLMPYGLGIHHAGLSLADRDSVQALFADGSIQVLVCTATLAWGVNLPAHT 875
Query: 286 VIIRDSYVGRD----FISLNMYK--QMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMN 339
VII+ + V ++ L+ QM+GRAGR GE I++ + + + S++N
Sbjct: 876 VIIKGTQVYSPEKGAWVELSPQDVLQMLGRAGRPQYDTFGEGIIIT-SQAEIQYYLSLLN 934
Query: 340 AGPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFY--QLKSP--------- 388
PI S + +L E+V N+ + E V L +T Y L+SP
Sbjct: 935 QQ-LPIESQLMSKLADNLNAEIVLGNVRTRDEGVDWL-SYTYLYVRMLRSPGLYSVGADY 992
Query: 389 --EDQQTFLETTLSEIVASLLASKGTMLTMNEAGHLSLTSIAKAAVQAGLSHDVCLIIYS 446
+D L A++L G + + G L T + + + + H+ ++ YS
Sbjct: 993 HNDDALEQKRVDLIHSAAAVLEKAGLVKYEKKTGRLQSTELGRISSHYYIGHN-SMLTYS 1051
Query: 447 DLLHNKLNFCLLNSLHML---FLVIPL 470
L + L + L F IP+
Sbjct: 1052 QHLQPSITTIELFRIFALSDEFKYIPV 1078
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 83/399 (20%), Positives = 170/399 (42%), Gaps = 52/399 (13%)
Query: 37 LNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYL 96
L + + + T + L + + + L + DE H+L G + E +VS++ Y+
Sbjct: 1471 LEQADLVLATPTQWDVLSRQWQRRKNVQTVQLFIPDELHLLGG-YAGYVYEVIVSRMHYI 1529
Query: 97 ----KKSIQIFAMSATIGNINALSTFIEGITY-VENSRPTKHSEYVTVDKRVFQSFDGKS 151
+ ++I +S + N + +I + + N P H+ V ++ + +S
Sbjct: 1530 ALQTENDMRIVGLSVPLSNARDIGEWIGANKHTIYNFSP--HARPVPLELHL------QS 1581
Query: 152 LTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRL--------QFDR 203
T + + ++ ++L L + L+F S+ A L DR
Sbjct: 1582 FTIPHFPSAMLAMARPAYQSILQLSH-DKPALVFVPSRKQVRATAADLLSACAIDNDEDR 1640
Query: 204 FPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLA 263
F E L+E + E+ L+T+L +G+ Y+H L A ++R++ +
Sbjct: 1641 FLNAD---VSELAPLLERVHEQT---LATSLS----HGIGYYHEALNATDKRIVLHLFSI 1690
Query: 264 GTLQIICCTSTLAAGVNLPAQRVIIRDS--YVGRD--FISLNMYK--QMVGRAGRTGLQE 317
G +Q++ + + +++ A VI+ ++ + GR+ +I + QM G+A R G +
Sbjct: 1691 GAIQVLLASRDVCWELDITAHLVIVMNTQFFDGREHRYIDYPISDILQMFGKASRPGQDK 1750
Query: 318 SGESIMLCKTMQ-DFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKTL 376
G +++ ++ D+ + +N P+ SH+ L D + + SS +D
Sbjct: 1751 LGRGVLMVPAVKRDY--YKKFLNEA-LPVESHLQ-VYLHDAFVTEASTRTISSTQDAVDW 1806
Query: 377 IKHTLFYQ--LKSP------EDQQTFLETTLSEIVASLL 407
+ +T FY+ L +P + L T LSE+V + L
Sbjct: 1807 MTYTYFYRRLLANPSFYGLGDVSHEGLSTFLSELVENTL 1845
>gi|158318452|ref|YP_001510960.1| DEAD/DEAH box helicase [Frankia sp. EAN1pec]
gi|158113857|gb|ABW16054.1| DEAD/DEAH box helicase domain protein [Frankia sp. EAN1pec]
Length = 1230
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 133/282 (47%), Gaps = 38/282 (13%)
Query: 42 IYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQ 101
+++ T EK + + + E+G +VIDE H+L RGP+LE ++++V ++ ++
Sbjct: 537 LWVSTTEKFESVCRATSLRAALGEVGCLVIDEIHLLGSAGRGPLLEALLARVRGVESPVR 596
Query: 102 IFAMSATIGNINALSTFIEGITYVENSRPTKHSEYV-----TVDKRVFQSFDGKSLTEIY 156
I +SAT+ N ++ ++ RP++ + + T D++ + +++T +
Sbjct: 597 IVGLSATVANAEEVAGWLGARVVTTTWRPSRLTWQLPMIPATADRKTDNANRLRAVTAL- 655
Query: 157 ADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKE 216
+ VL+FC S+ AL + DR G
Sbjct: 656 ---------------TRMVTDDGGSVLVFCGSRRNVRATALTIAADR--GAD-------- 690
Query: 217 DLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLA 276
I + ++ ++ + C GV H+ D R E A+ A L ++ T+T+A
Sbjct: 691 --IRGIDPDDGSRVH---QVCTAVGVGLHYKDWE--HRHEAERAFRARGLDVLVATTTVA 743
Query: 277 AGVNLPAQRVIIRDSYVGRDFISLNMYKQMVGRAGRTGLQES 318
AGVNLPA+ V++RD+ +G D I + +QM GRAGR G+ E+
Sbjct: 744 AGVNLPARAVVVRDTRIGLDKIDVATVQQMFGRAGRVGVGET 785
>gi|401888869|gb|EJT52816.1| RNA helicase [Trichosporon asahii var. asahii CBS 2479]
gi|406697689|gb|EKD00945.1| RNA helicase [Trichosporon asahii var. asahii CBS 8904]
Length = 1701
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 121/473 (25%), Positives = 224/473 (47%), Gaps = 72/473 (15%)
Query: 33 TKRQLNKKSIYICTIEKGSKLIGSLIQENRI-DEIGLIVIDEFHMLNEPQRGPILECVVS 91
T+ ++N+ I + T EK + E + ++ L++IDE H+LNE +RG ++E +V+
Sbjct: 378 TRAEINETQIIVTTPEKWDVVTRKPTGEGELASKVRLLIIDEVHLLNE-ERGAVIETIVA 436
Query: 92 KVLYLKKS----IQIFAMSATIGNINALSTFI-----EGITYVENS-RPTKHSEYVTVDK 141
+ L +S I+I +SAT+ N +S F+ +G+ + + S RP ++
Sbjct: 437 RTLRQVESSQSLIRIVGLSATLPNYIDVSDFLRVNRYQGLFFFDASFRPVPLEQH----- 491
Query: 142 RVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRLQ- 200
F GK+ ++ N+D + D VL +V+ V++F ++ A +L+
Sbjct: 492 --FIGVKGKARSQTQIRNMDNVVF----DKVLEMVREGHQVMVFVHARKETVKTAQKLKE 545
Query: 201 -------FDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGE 253
D F T+++ K + + + + ++E YG HHA + +
Sbjct: 546 MATEEGALDVF-DTRDHPK------FQLYRRDVGTSRNKEMKELFDYGFGIHHAGMLRSD 598
Query: 254 RRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIR-----DSYVG--RDFISLNMYKQM 306
R ++E + ++++CCTSTLA GVNLPA VII+ DS G +D L++ Q+
Sbjct: 599 RNMMERMFEDNAIKVLCCTSTLAWGVNLPAHAVIIKGTQVYDSNKGSFQDLSVLDVL-QI 657
Query: 307 VGRAGRTGLQESGESIMLCKTMQDFLR--FSSMMNAGPEPISSHMDPPTLVDLILEVVAA 364
GRAGR G + SG +C T QD L S+M+ +PI S P +VD + ++
Sbjct: 658 FGRAGRPGYETSGVG-YIC-TTQDKLDHYLYSIMSQ--QPIESKFI-PGMVDALNAEISL 712
Query: 365 NLCSSLEDVKTLIKHT-LFYQLK-----------SPEDQQTFLETTLSEIV--ASLLASK 410
+++ + + I +T LF +++ P+D L S++V A+ +
Sbjct: 713 GTIANVREAISWIGYTYLFVRMRREPFIYGMSHDEPKDDPQ-LGNKRSDLVTQAARTLAA 771
Query: 411 GTMLTMNEAGH-LSLTSIAKAAVQAGLSHDVCLII---YSDLLHNKLNFCLLN 459
M T +E+ + ++T + + A + L H + ++ + N F +L+
Sbjct: 772 AKMATFDESNNSFAITDLGRIAARYYLRHQTVEVFNEKFNPRMKNADIFAMLS 824
>gi|340371544|ref|XP_003384305.1| PREDICTED: u5 small nuclear ribonucleoprotein 200 kDa helicase-like
[Amphimedon queenslandica]
Length = 959
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 110/369 (29%), Positives = 180/369 (48%), Gaps = 51/369 (13%)
Query: 28 GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILE 87
G + TK Q+ + +CT EK + + + LI+IDE H+L++ RGP+LE
Sbjct: 578 GDHQLTKEQVAATQVIVCTPEKWDIITRKGGDRSYTQLVRLIIIDEIHLLHD-TRGPVLE 636
Query: 88 CVVSKVLY----LKKSIQIFAMSATIGNINALSTFI-----EGITYVENS-RPTK-HSEY 136
+V++ + + I++ +SAT+ N ++TF+ +G+ Y +NS RP Y
Sbjct: 637 AIVARTIRQIEATQDPIRLVGLSATLPNYEDVATFLRVDPAKGLFYFDNSFRPVPLEQSY 696
Query: 137 VTV-DKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSK--IACS 193
+ V +K+ + F + + EI D + S G VL+F S+ +
Sbjct: 697 IGVTEKKALKRF--QLINEIVYDKVIESA-------------GKQQVLVFVHSRKETVKT 741
Query: 194 NLALR---LQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLT 250
ALR L+ D T +E E L+ E + + L++ + YG A H+A +
Sbjct: 742 AKALRDMCLEKD----TLGLFLKEGSASTEVLRTEAEQTKNLELKDLLPYGFAIHNAGMN 797
Query: 251 AGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYV-----GRDFISLNMYK- 304
+R L+EE + G +QI+ T+TLA GVNLPA VII+ + V GR ++ L M
Sbjct: 798 RIDRTLVEELFADGHIQILVSTATLAWGVNLPAHTVIIKGTQVYSPEKGR-WVELGMLDV 856
Query: 305 -QMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVA 363
QM+GRAGR +SGE I++ + + + S+MN PI S ++ ++L A
Sbjct: 857 LQMLGRAGRPQYDKSGEGILITQ-HSELQYYLSLMNQ-QLPIESQF----IMSVLLAGSA 910
Query: 364 ANLCSSLED 372
+ S ED
Sbjct: 911 TCITSRRED 919
>gi|330930600|ref|XP_003303096.1| hypothetical protein PTT_15143 [Pyrenophora teres f. teres 0-1]
gi|311321159|gb|EFQ88808.1| hypothetical protein PTT_15143 [Pyrenophora teres f. teres 0-1]
Length = 2223
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 109/410 (26%), Positives = 202/410 (49%), Gaps = 43/410 (10%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V E+ + K E + + E G + TK+Q+ + I + T EK +
Sbjct: 602 LVAEQVGNFGKRLEPYGIKVSELTGDRQL---TKQQIAETQIIVTTPEKYDVITRKATDT 658
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKS----IQIFAMSATIGNINALS 116
+ I+ + LI IDE H+L++ RGP++E +VS+ L + ++I +SAT+ N ++
Sbjct: 659 SYINLVRLICIDEIHLLHD-DRGPVIESIVSRTLRRSEQTGDQVRIVGLSATLPNYRDVA 717
Query: 117 TFI-----EGITYVENS-RPTK-HSEYVTV-DKRVFQSFDGKSLTEI-YADNLDYSLTGS 167
+F+ +G+ + + + RP E++ V DK+ + K++ ++ Y L+
Sbjct: 718 SFLRVDPDKGLFHFDATFRPCPLKQEFIGVTDKKAIKQL--KTMNDVCYTKVLE------ 769
Query: 168 GPDAVLHLVQGNLMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLI--EALKEE 225
+ + +LIF S+ + A ++ D+ + K + D E L+EE
Sbjct: 770 ------QVGEHRNQMLIFVHSRKETAKTAKYIR-DKALEEESIGKILRSDAASREILREE 822
Query: 226 NDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQR 285
++ + +L++ + YG HHA ++ +R +E+ + G++Q++ CT+TLA GVNLPA
Sbjct: 823 SESVQNADLKDLMPYGFGIHHAGMSRADRTSVEDLFADGSIQVLVCTATLAWGVNLPAHT 882
Query: 286 VIIRDSYV----GRDFISLNMYK--QMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMN 339
VII+ + + ++ L+ QM+GRAGR GE I++ T + + S++N
Sbjct: 883 VIIKGTQIYSPEKGSWVELSPQDVLQMLGRAGRPQYDTYGEGIIIT-TQAEIQYYLSLLN 941
Query: 340 AGPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQ-LKSP 388
PI S + +L E+V N+ + E V L LF + L+SP
Sbjct: 942 QQ-LPIESQLVSKLADNLNAEIVLGNVRNRDEAVDWLGYTYLFVRMLRSP 990
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 82/391 (20%), Positives = 162/391 (41%), Gaps = 37/391 (9%)
Query: 15 EFKFYLEEYAGVKGQYPPTK---------RQLNKKSIYICTIEKGSKLIGSLIQENRIDE 65
++K + E +G+ G K R L K + + T + L + +
Sbjct: 1447 QYKNWNERLSGLSGGKDIVKLTGETTADLRLLEKGDLILATPSQWDSLSRQWQRRKNVQS 1506
Query: 66 IGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQ----IFAMSATIGNINALSTFIEG 121
I L++ DE HML G + E VVS++ + I+ I ++ ++ N + +I
Sbjct: 1507 IALLIADELHMLGG-SNGHVYEIVVSRMQAMATQIESKLRIIGLAVSLANARDIGEWIGA 1565
Query: 122 ITY-VENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNL 180
+ + N P + + + + F SL A ++T PD + N
Sbjct: 1566 TKHTIYNFSPAIRAVPLELKIQSFTIPHFPSLMMAMARPTYSAITQMSPDKPAMVFVPNR 1625
Query: 181 MVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILY 240
+S + + +A + DRF E + ++E + E + L E + +
Sbjct: 1626 KQARSSASDLFNACIADENE-DRFLNVD---LTEIQPILEKINEHS-------LAESLSH 1674
Query: 241 GVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS--YVGRDF- 297
G+ Y H L ++R ++ + G +Q++ + V+ A V+++ + Y GR+
Sbjct: 1675 GIGYFHEALNTFDKRAVQHLFKVGAVQVLIVSRDSCWEVDSSAHLVVVQGTQFYEGREHR 1734
Query: 298 ---ISLNMYKQMVGRAGRTGLQESGESI-MLCKTMQDFLRFSSMMNAGPEPISSHMDPPT 353
++ QM G+AGR G+ +S + + ML +++ + +N PI SH+ P
Sbjct: 1735 YRDYPISDILQMFGKAGRVGVDKSAKGVLMLPAVKREY--YKKFLNEA-LPIESHL-PDY 1790
Query: 354 LVDLILEVVAANLCSSLEDVKTLIKHTLFYQ 384
L D + ++A S ++ +T FY+
Sbjct: 1791 LHDAFVAEISAKTIESTQEAVDWSTYTYFYR 1821
>gi|296806093|ref|XP_002843866.1| pre-mRNA splicing factor [Arthroderma otae CBS 113480]
gi|238845168|gb|EEQ34830.1| pre-mRNA splicing factor [Arthroderma otae CBS 113480]
Length = 2234
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 123/475 (25%), Positives = 220/475 (46%), Gaps = 54/475 (11%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V E+ + K + + + E G + TK+Q+ + + T EK +
Sbjct: 602 LVQEQVGNFGKRLQHYGIRVSELTGDRQL---TKQQIADTQLIVTTPEKWDIITRKATDT 658
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVL----YLKKSIQIFAMSATIGNINALS 116
+ + L++IDE H+L++ +RGP+LE +VS+ + + +++ +SAT+ N +
Sbjct: 659 SYTRLVRLVIIDEIHLLHD-ERGPVLESIVSRTIRKTEQTGEPVRLVGLSATLPNYRDVG 717
Query: 117 TF-----IEGITYVENS-RPTK-HSEYVTV-DKRVFQSFDGKSLTEI-YADNLDYSLTGS 167
+F I G+ + + + RP E++ V DK+ + K++ +I Y LD G+
Sbjct: 718 SFLRVDPINGLFHFDGTFRPCPLKQEFIGVTDKKAIKQL--KTMNDICYTKVLDQ--VGA 773
Query: 168 GPDAVLHLVQGNLMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEA--LKEE 225
+ +LIF S+ A R D+ + + + D L EE
Sbjct: 774 NKN----------QMLIFVHSRKETVKTA-RYIRDKAVEMETIGQILRSDAASRAILAEE 822
Query: 226 NDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQR 285
D L++ + YG HHA ++ +R +E+ + G+LQ++ CT+TLA GVNLPA
Sbjct: 823 ADSVNDPGLKDLMPYGFGIHHAGMSKADRTSVEDLFADGSLQVLVCTATLAWGVNLPAHC 882
Query: 286 VIIRDSYV----GRDFISLNMYK--QMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMN 339
VII+ + V ++ L+ QM+GRAGR GE I++ T + + S++N
Sbjct: 883 VIIKGTQVYSPEKGSWVELSPQDVLQMLGRAGRPQYDSFGEGIIIT-TQTELQYYLSLLN 941
Query: 340 AGPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQ-LKSPE--------D 390
PI S + +L E+V N+ S E V+ L LF + L+SP +
Sbjct: 942 QQ-LPIESQLMSKLADNLNAEIVLGNVRSREEGVEWLGYTYLFVRMLRSPGLYSIGADYE 1000
Query: 391 QQTFLETTLSEIV--ASLLASKGTMLTMN-EAGHLSLTSIAKAAVQAGLSHDVCL 442
T LE +++ A+++ K ++ + + G L T + + A +SH L
Sbjct: 1001 HDTSLEQRRVDLIHSAAMVLEKSNLVKYDKKTGKLQATELGRIASHYYISHSSML 1055
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 96/206 (46%), Gaps = 19/206 (9%)
Query: 234 LEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS-- 291
L E I +G+ Y+H L ++R++ Y G LQ++ + + ++L A VII +
Sbjct: 1668 LAESISHGIGYYHEALNTSDKRIVSHLYKIGALQVMIASRDVCWELDLTAHLVIIMGTQL 1727
Query: 292 YVGRDFISLNM----YKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISS 347
+ GR+ L+ QM G+A R G+ +++ ++ + +N P+ S
Sbjct: 1728 FDGREHRYLDYPISEILQMFGKATRPREDRIGKGVLMVPAVKREY-YKKFLNEA-LPMES 1785
Query: 348 HMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQ--LKSP------EDQQTFLETTL 399
H+ L D + ++ +S +D + ++ FY+ L +P + L T L
Sbjct: 1786 HLQ-LYLHDAFVTEISTKTITSTQDAVDWMTYSYFYRRLLANPSYYGLSDVSHEGLSTFL 1844
Query: 400 SEIVASLLA--SKGTMLTMNEAGHLS 423
SE+V + L ++ ++ M+E +++
Sbjct: 1845 SELVENTLKELAEAQIIDMDEDDNIA 1870
>gi|224130174|ref|XP_002328672.1| predicted protein [Populus trichocarpa]
gi|222838848|gb|EEE77199.1| predicted protein [Populus trichocarpa]
Length = 1544
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 101/375 (26%), Positives = 170/375 (45%), Gaps = 30/375 (8%)
Query: 28 GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILE 87
G Y P L I I T EK + + + + ++GL+++DE H+L RGPILE
Sbjct: 982 GDYTPDLMALLSADIIISTPEKWDGISRNWHSRSYVTKVGLVILDEIHLLGA-DRGPILE 1040
Query: 88 CVVSKVLYL----KKSIQIFAMSATIGNINALSTF-----IEGITYVENSRPTKHSEYVT 138
+VS++ Y+ +++++ +S + N + L+ + I + + RP ++
Sbjct: 1041 VIVSRMRYISSQTERAVRFVGLSTALANASDLADWLGVGEIGLFNFKPSVRPVPLEVHIQ 1100
Query: 139 VDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAV-LHLVQGNLMVLIFCSSKIACSNLAL 197
Q + GK Y ++ S+ A+ H V+IF SS+ AL
Sbjct: 1101 AIAFYGQGYPGK----YYCPRMN-SMNKPAYAAICTH--SPTKPVIIFVSSRRQTRLTAL 1153
Query: 198 RLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLI 257
L +F + E+ +Q E L+ NL + +G+ HHA L +R L+
Sbjct: 1154 DLI--QFAASDEHPRQFLSMTEEVLQMVLSQVTDQNLRHTLQFGIGLHHAGLNERDRSLV 1211
Query: 258 EEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS--YVGR-----DFISLNMYKQMVGRA 310
EE + +Q++ CTSTLA GVNLPA VII+ + Y G+ DF ++ QM+GRA
Sbjct: 1212 EELFANNKIQVLVCTSTLAWGVNLPAHLVIIKGTEYYDGKAKRYVDFPITDIL-QMMGRA 1270
Query: 311 GRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAANLCSSL 370
GR + G++++L + F P P+ S + + E+V +C
Sbjct: 1271 GRPQYDQHGKAVILVHEPKK--SFYKKFLYEPFPVESSLREQLHEHINAEIVTGTICHKE 1328
Query: 371 EDVKTLIKHTLFYQL 385
+ + L LF +L
Sbjct: 1329 DAMHYLTWTYLFRRL 1343
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 84/282 (29%), Positives = 140/282 (49%), Gaps = 40/282 (14%)
Query: 66 IGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKS----IQIFAMSATIGNINALSTFIE- 120
+ L++IDE H+LN+ RGP++E +V++ L +S I+I +SAT+ N ++ F+
Sbjct: 179 VKLLIIDEVHLLND-DRGPVIEALVARTLRQVESTQTMIRIVGLSATLPNYLEVAQFLRV 237
Query: 121 ----GITYVENS-RPTK-HSEYVTVDKRVFQSFDGKS--LTEI-YADNLDYSLTGSGPDA 171
G+ + ++S RP +Y+ + + Q+F + L EI Y +D
Sbjct: 238 SPETGLFFFDSSYRPVPLAQQYIGISE---QNFAARKDLLNEICYKKVVD---------- 284
Query: 172 VLHLVQGNLMVLIFCSSKIACSNLALRL-QFDRFPGTKEYKKQEKEDLIEALKEENDGKL 230
L QG+ ++F S+ + A +L + R E + ++ K+E
Sbjct: 285 --SLKQGH-QAMVFVHSRKDTAKTAEKLVELARNNEDVELFRNDEHPQFALFKKEVMKSR 341
Query: 231 STNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIR- 289
+ +L E GV HHA + +R L E + G L+++ CT+TLA GVNLPA V+I+
Sbjct: 342 NKDLVELFGSGVGVHHAGMLRADRGLTERLFSGGLLKVLVCTATLAWGVNLPAHTVVIKG 401
Query: 290 ----DSYVG--RDFISLNMYKQMVGRAGRTGLQESGESIMLC 325
D G RD L++ Q+ GRAGR +SGE I++
Sbjct: 402 TQLYDPKAGGWRDLGMLDVM-QIFGRAGRPQFDKSGEGIIIT 442
>gi|241951266|ref|XP_002418355.1| ATP-dependent DNA helicase, putative [Candida dubliniensis CD36]
gi|223641694|emb|CAX43655.1| ATP-dependent DNA helicase, putative [Candida dubliniensis CD36]
Length = 1203
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 106/368 (28%), Positives = 180/368 (48%), Gaps = 58/368 (15%)
Query: 37 LNKKSIYICTIEKGSKLIGSLIQENRI-DEIGLIVIDEFHMLNEPQRGPILECVVSKVLY 95
+ K +I + T EK + +R+ I L+++DE H+L E RG LE V++++
Sbjct: 181 VRKSNIIVSTPEKWDMITRKWKDYSRLFGLIKLLLVDEIHILKE-SRGSTLEVVMTRMKR 239
Query: 96 LKKSIQIFAMSATIGNINALSTFI----------EGITYVENSRPTKHSE----YVTVDK 141
+ ++I A+SAT+ N +S +I E + + E RP K S+ Y + +
Sbjct: 240 ICIGLRILAISATVANAIDISKWIRLHDESTLPAETMCFGEEFRPVKLSKIVYGYKSTSE 299
Query: 142 RVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRLQF 201
FQ FD I+ L+ L V++ + VLIFCS++ +C A + F
Sbjct: 300 NDFQ-FD------IF---LNTKLL-----EVINRHSNDKSVLIFCSTRNSCQATA-KFLF 343
Query: 202 DRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAY 261
+ P + + D+ LK+ + +T G+A+HHA LT G+R+ IE A+
Sbjct: 344 NNLP------EASRTDI--KLKDRDAMNYTTR-------GIAFHHAGLTFGDRKQIETAF 388
Query: 262 LAGTLQIICCTSTLAAGVNLPAQRVIIRDS--YVGRDFISLNMYK--QMVGRAGRTGLQE 317
L L+I+CCTSTLA G+NLPA V+I+ + +V F + QMVGRAGR +
Sbjct: 389 LNSRLKILCCTSTLAVGINLPAYLVVIKGTKCWVESSFQEYSETDILQMVGRAGRPQFES 448
Query: 318 SGESIMLCKTMQDFLRFSSMMNAGPEPISS--HMDPPTLVDLILEVVAANLCSSLEDVKT 375
G ++++ + R+ ++ G E I S HM+ + + ++ + +++D
Sbjct: 449 DGVAVIMTSSKWKH-RYERII-EGTEKIESSLHMN---FREHLAAEISVGVIKNIDDSLA 503
Query: 376 LIKHTLFY 383
+K T Y
Sbjct: 504 WLKSTYLY 511
>gi|296198862|ref|XP_002746909.1| PREDICTED: activating signal cointegrator 1 complex subunit 3
[Callithrix jacchus]
Length = 2201
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 105/397 (26%), Positives = 184/397 (46%), Gaps = 51/397 (12%)
Query: 14 EEFKFYLEEYAGVK-----GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGL 68
+++K +EE G K G P + + K + + T EK + S + + ++ +
Sbjct: 1390 DDWKVRIEEKLGKKVIELTGDVTPDMKSIAKADLIVTTPEKWDGVSRSWQNRSYVQQVTI 1449
Query: 69 IVIDEFHMLNEPQRGPILECVVSKVLYL----KKSIQIFAMSATIGNINALSTFIE---- 120
++IDE H+L E +RGP+LE +VS+ ++ +K +++ +S + N L+ ++
Sbjct: 1450 LIIDEIHLLGE-ERGPVLEVIVSRTNFISSHTEKPVRVVGLSTALANARDLADWLNIKQM 1508
Query: 121 GITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNL 180
G+ N RP+ + V Q F G+ A S+ A+
Sbjct: 1509 GLF---NFRPSVRPVPLEVH---IQGFPGQHYCPRMA-----SMNKPAFQAIRSHSPAK- 1556
Query: 181 MVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQ-------EKEDLIEALKEENDGKLSTN 233
VLIF SS+ AL L F T+E KQ E E++I +++ +N
Sbjct: 1557 PVLIFVSSRRQTRLTALELI--AFLATEEDPKQWLNMDEREMENIIATVRD-------SN 1607
Query: 234 LEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS-- 291
L+ + +G+ HHA L +R+ +EE ++ +Q++ TSTLA GVN PA VII+ +
Sbjct: 1608 LKLTLAFGIGMHHAGLHERDRKTVEELFVNCKVQVLIATSTLAWGVNFPAHLVIIKGTEY 1667
Query: 292 YVG--RDFISLNMYK--QMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISS 347
Y G R ++ + QM+GRAGR + G++++L ++ F P P+ S
Sbjct: 1668 YDGKTRRYVDFPITDVLQMMGRAGRPQFDDQGKAVILVHDIKK--DFYKKFLYEPFPVES 1725
Query: 348 HMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQ 384
+ L D + +A +S +D I T F++
Sbjct: 1726 SL-LGVLSDHLNAEIAGGTITSKQDAMDYITWTYFFR 1761
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 94/373 (25%), Positives = 167/373 (44%), Gaps = 42/373 (11%)
Query: 33 TKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEI-GLIVIDEFHMLNEPQRGPILECVVS 91
+K ++ + + + T EK + + + + +I L+++DE H+L+E RGP+LE +V+
Sbjct: 571 SKSEILRTQMLVTTPEKWDVVTRKSVGDVALSQIVKLLILDEVHLLHE-DRGPVLESIVA 629
Query: 92 KVLYLKKS----IQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSF 147
+ L +S I+I +SAT+ N ++TF+ Y+ D R
Sbjct: 630 RTLRQVESTQSMIRILGLSATLPNYLDVATFLHVNPYIG---------LFFFDGRFRPVP 680
Query: 148 DGKSLTEIYADNLDYSLTGSGP---DAVLHLVQGNLMVLIFCSSKIACSNLALRL----- 199
G++ I N L + VL V+ V++F ++ A A+ L
Sbjct: 681 LGQTFLGIKCANKMQQLNNMDEVCYENVLKQVKAGHQVMVFVHARNATVRTAMSLIEKAK 740
Query: 200 ---QFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRL 256
Q F T+ ++ E ++ + + + E G + HHA + +R L
Sbjct: 741 NCGQISFFFPTQGHEYALAEKQVQRSR-------NKQVRELFPDGFSIHHAGMLRQDRNL 793
Query: 257 IEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS--YVGR--DFISLNMYK--QMVGRA 310
+E + G ++++ CT+TLA GVNLPA VII+ + Y + F+ L + Q+ GRA
Sbjct: 794 VENLFSNGHIKVLVCTATLAWGVNLPAHAVIIKGTQIYAAKRGSFVDLGILDVMQIFGRA 853
Query: 311 GRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAANLCSSL 370
GR + GE I++ T D L + PI S +L D + +A +++
Sbjct: 854 GRPQFDKFGEGIII--TTHDKLSHYLTLLTQRNPIESQF-LESLADNLNAEIALGTVTNV 910
Query: 371 EDVKTLIKHTLFY 383
E+ I +T Y
Sbjct: 911 EEAVKWISYTYLY 923
>gi|449296542|gb|EMC92561.1| hypothetical protein BAUCODRAFT_142160 [Baudoinia compniacensis
UAMH 10762]
Length = 1977
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 108/381 (28%), Positives = 178/381 (46%), Gaps = 50/381 (13%)
Query: 33 TKRQLNKKSIYICTIEKGSKLIGSLIQENR-IDEIGLIVIDEFHMLNEPQRGPILECVVS 91
TK ++ + I + T EK + + + ++ L++IDE HML++ +RG +LE +V+
Sbjct: 384 TKAEIVQTQIIVTTPEKWDVVTRKSTGDTELVQKVRLLIIDEVHMLHD-ERGAVLESLVA 442
Query: 92 K----VLYLKKSIQIFAMSATIGNINALSTFIE-----GITYVENS-RPTKHSEYVTVDK 141
+ V + I+I +SAT+ N ++ F++ G+ Y + S RP ++
Sbjct: 443 RTERQVESTQSLIRIVGLSATLPNYIDVADFLKVNRMAGLFYFDQSFRPVPLEQH----- 497
Query: 142 RVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRLQF 201
F GK ++ +NLD + + V V+ V++F S+ A RL
Sbjct: 498 --FIGVKGKPGSKPSRENLD----NTAFEKVKEQVEQGHQVMVFVHSRKDTVKTA-RLLL 550
Query: 202 DRFPGTKEYKKQEK--EDLIEALKEEN------DGKLSTNLE--ECILYGVAYHHADLTA 251
D K QE+ +DL + E D K S E E + G+ HHA +
Sbjct: 551 D--------KAQEEGLQDLFDPSGHEGYANAVRDVKQSKGREIRELVAKGLGTHHAGMPR 602
Query: 252 GERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYV----GRDFISLNMYK--Q 305
+R LIE + G LQ++CCT+TLA GVNLPA V+I+ + + F+ L + Q
Sbjct: 603 SDRNLIERLFAEGVLQVLCCTATLAWGVNLPAAAVVIKGTQLYSAEAGKFVDLGILDVLQ 662
Query: 306 MVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAAN 365
+ GRAGR Q++G I+L T QD L+ +PI S + +L E+
Sbjct: 663 IFGRAGRPQFQDTGIGIIL--TTQDKLQHYLAAVTQQQPIESQFSRKMVDNLNAEIALGT 720
Query: 366 LCSSLEDVKTLIKHTLFYQLK 386
+ S E + L LF +++
Sbjct: 721 VTSVPEAITWLGYSYLFVRMR 741
Score = 99.0 bits (245), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 86/316 (27%), Positives = 140/316 (44%), Gaps = 49/316 (15%)
Query: 28 GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILE 87
G P R + I + T EK + S + + ++ L++IDE H+L RGPILE
Sbjct: 1223 GDNTPDTRTIRDADIIVTTPEKWDGISRSWQTRSYVQQVSLVIIDEIHLLGG-DRGPILE 1281
Query: 88 CVVSKVLYL----KKSIQIFAMSATIGNINALSTFI---EGITYVENS-RPTKHSEYVT- 138
+VS++ Y+ K S+++ MS N L+ ++ EG+ +S RP Y+
Sbjct: 1282 IIVSRMNYIASQKKGSVRLVGMSTACANAMDLANWLGVKEGLFNFRHSVRPVPLEIYIDG 1341
Query: 139 -VDKRVF----QSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSK---- 189
+R F QS + + I + + D V++F +S+
Sbjct: 1342 FPQQRGFCPLMQSMNRPTFLAIKSHSPDKP------------------VIVFVASRRQTR 1383
Query: 190 IACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADL 249
+ +L + P + + + ++DL L D L E + +G+ HHA L
Sbjct: 1384 LTARDLINFCGMEDNP--RRFVRMSEDDLALNLDRVKD----EALREALSFGIGLHHAGL 1437
Query: 250 TAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYV------GRDFISLNMY 303
+R+L EE + +QI+ TSTLA GVNLPA V+++ + G + L
Sbjct: 1438 VESDRQLAEELFANNKIQILVATSTLAWGVNLPAHLVVVKGTQFFDAKIEGYKDMDLTDV 1497
Query: 304 KQMVGRAGRTGLQESG 319
QM+GRAGR SG
Sbjct: 1498 LQMLGRAGRPQFDTSG 1513
>gi|255547213|ref|XP_002514664.1| activating signal cointegrator 1 complex subunit 3, helc1, putative
[Ricinus communis]
gi|223546268|gb|EEF47770.1| activating signal cointegrator 1 complex subunit 3, helc1, putative
[Ricinus communis]
Length = 2100
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 102/370 (27%), Positives = 167/370 (45%), Gaps = 27/370 (7%)
Query: 28 GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILE 87
G Y P L I I T EK + + + + ++GL+++DE H+L RGPILE
Sbjct: 1375 GDYTPDLMALLSADIIISTPEKWDGISRNWHSRSYVTKVGLMILDEIHLLGA-DRGPILE 1433
Query: 88 CVVSKVLYL----KKSIQIFAMSATIGNINALSTFIE-GITYVENSRPTKHSEYVTVDKR 142
+VS++ Y+ +++++ +S + N L+ ++ G + N +P+ + V
Sbjct: 1434 VIVSRMRYISSQTERAVRFVGLSTALANAGDLADWLGVGEIGLFNFKPSVRPVPLEVH-- 1491
Query: 143 VFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRLQFD 202
Q + GK Y ++ + H VLIF SS+ AL L
Sbjct: 1492 -IQGYPGK----YYCPRMNSMNKPAYAAICTH--SPTKPVLIFVSSRRQTRLTALDLI-- 1542
Query: 203 RFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYL 262
+F E+ +Q EAL+ NL + +G+ HHA L +R L+EE +
Sbjct: 1543 QFAAADEHPRQFLSMTEEALQMVLSQVTDQNLRHTLQFGIGLHHAGLNDKDRSLVEELFA 1602
Query: 263 AGTLQIICCTSTLAAGVNLPAQRVIIRDS--YVGR-----DFISLNMYKQMVGRAGRTGL 315
+Q++ CTSTLA GVNLPA VII+ + Y G+ DF ++ QM+GRAGR
Sbjct: 1603 NNKIQVLVCTSTLAWGVNLPAHLVIIKGTEYYDGKSRRYVDFPITDIL-QMMGRAGRPQY 1661
Query: 316 QESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKT 375
+ G++++L + F P P+ S + E+V +C + V
Sbjct: 1662 DQHGKAVILVHEPKK--SFYKKFLYEPFPVESSLKEQLHDHFNAEIVTGTICHKEDAVHY 1719
Query: 376 LIKHTLFYQL 385
L LF ++
Sbjct: 1720 LTWTYLFRRV 1729
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 85/303 (28%), Positives = 145/303 (47%), Gaps = 36/303 (11%)
Query: 66 IGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKS----IQIFAMSATIGNINALSTFIE- 120
+ L++IDE H+LN+ RGP++E +V++ L +S I+I +SAT+ N ++ F+
Sbjct: 572 VKLLIIDEVHLLND-DRGPVIEALVARTLRQVESTQMMIRIVGLSATLPNYLEVAQFLRV 630
Query: 121 ----GITYVENS-RPTK-HSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLH 174
G+ + ++S RP +Y+ + ++ F + + Y +D
Sbjct: 631 NPEAGLFFFDSSYRPVPLAQQYIGISEQNFAARNDLLNDICYKKVVD------------S 678
Query: 175 LVQGNLMVLIFCSSKIACSNLALRL-QFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTN 233
L QG+ V++F S+ + A +L + R E K + +K+E + +
Sbjct: 679 LRQGH-QVMVFVHSRKDTAKTADKLVELARNYDDLELFKNDAHPQFSLVKKEVVKSRNKD 737
Query: 234 LEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIR---- 289
+ + V HHA + +R L E + G L+++ CT+TLA GVNLPA V+I+
Sbjct: 738 VVQLFESAVGIHHAGMLRADRVLTERLFSDGLLKVLVCTATLAWGVNLPAHTVVIKGTQL 797
Query: 290 -DSYVG--RDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPIS 346
D G RD L++ Q+ GRAGR +SGE I++ T D L + + PI
Sbjct: 798 YDPKAGGWRDLGMLDVM-QIFGRAGRPQFDKSGEGIII--TSHDKLAYYLRLLTSQLPIE 854
Query: 347 SHM 349
S
Sbjct: 855 SQF 857
>gi|123502517|ref|XP_001328316.1| Type III restriction enzyme, res subunit family protein
[Trichomonas vaginalis G3]
gi|121911257|gb|EAY16093.1| Type III restriction enzyme, res subunit family protein
[Trichomonas vaginalis G3]
Length = 930
Score = 112 bits (281), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 112/459 (24%), Positives = 207/459 (45%), Gaps = 40/459 (8%)
Query: 209 EYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQI 268
EY +++ LI+ L + + G L +L C++ GV +HHA + ER+++EEA T+ +
Sbjct: 438 EYLLSDRKQLIQKLSKTDTG-LDESLARCVMNGVGFHHAGMLLEERKIVEEAAKNCTISV 496
Query: 269 ICCTSTLAAGVNLPA-QRVIIRDSY-----VGRDFISLNMYKQMVGRAGRTGLQESGESI 322
I T+TL+AG+N+ + RV+I ++Y +G+ I ++Y QM GRAGR ES
Sbjct: 497 IVATTTLSAGINIRSVTRVVIYEAYRYIHGIGQRLIPNSLYTQMAGRAGR---DESIGGD 553
Query: 323 MLCKTMQD----FLRFSSMMNAGPEPISSHMDPPTLVD-LILEVVAANLC-SSLEDVKTL 376
++ M D FS + + E I+ H+ L D +L+ + L + LE
Sbjct: 554 VVVLGMNDKESELTDFSQLCSQRLEDINPHLLENDLFDRFLLQCFSTGLLKAGLEGAIEF 613
Query: 377 IKHTLFYQLKSPEDQQTFLETTLSEIVASLLASKGTMLTMNEAGHLSLTSIAKAAVQAGL 436
IK++ D + + +L + L K +T + +A ++ +
Sbjct: 614 IKNSFEALSNKNLDFENIAKNSLERLRNRSLLDK----------DYKVTPVGRAIAESAM 663
Query: 437 SHDVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEYRIPSDGILLSRSKVYDRYTKFHPQ 496
S + + + + + + L + +HML+L IP I ++ S V++ H
Sbjct: 664 SIEEGIELQGIIKNVETGLSLEDDVHMLYLCIP-PSAIANERTPDYDSDVWENIISKHET 722
Query: 497 TLRVAEALGV----TENLVALNVTGKLKDEKKAL----LCRFFHACILYDVLNFDNHQKV 548
++ + + + ++ GK KDEK L RF+ AC+L ++++ +V
Sbjct: 723 VTKLVSGISIINFQKHFIETKHLGGKNKDEKHKKIDHELDRFYFACLLGEMIDERPLSEV 782
Query: 549 AKMYGIQNSHLQNFLNVTSYFASKVYRFCEEL--PELWCYKQLLTDLPQTLMYCRAPNLR 606
+ + I Q+ + FA + +FCE++ P L L + L + ++
Sbjct: 783 TRRFSISRGAAQSLQMTCANFAGQTAKFCEKVGCPLLGT---ALNAFRKRLDFGVQSDIL 839
Query: 607 ALMDLPGVKIGRARQLLNAGYSSLELIARADAKEMVAKI 645
L+ LP AR+L+ G SS +A A + + I
Sbjct: 840 PLLRLPSCTKSTARKLIQKGISSPSEVAEASTERLATII 878
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 73/127 (57%), Gaps = 14/127 (11%)
Query: 37 LNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYL 96
+ SI +CT EK L+ S +++ + LIVIDE HM+NE QRG ++E ++ K L L
Sbjct: 173 FRRGSIAVCTFEKAHALLNSALRDGYFKKFKLIVIDEIHMINEEQRGAVIESLIEKCLLL 232
Query: 97 --KKSIQIFAMSATI--GNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSFDGKSL 152
K +I+I ++AT+ +++ ++T+I G ++ SRP++ Y F+S +G
Sbjct: 233 REKHNIRIIGLTATLNESDVDKIATWIGGFKFICESRPSRIKHY-------FKSTNG--- 282
Query: 153 TEIYADN 159
T ADN
Sbjct: 283 TLYVADN 289
>gi|403261069|ref|XP_003922957.1| PREDICTED: activating signal cointegrator 1 complex subunit 3
[Saimiri boliviensis boliviensis]
Length = 2202
Score = 112 bits (281), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 105/397 (26%), Positives = 184/397 (46%), Gaps = 51/397 (12%)
Query: 14 EEFKFYLEEYAGVK-----GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGL 68
+++K +EE G K G P + + K + + T EK + S + + ++ +
Sbjct: 1390 DDWKVRIEEKLGKKVIELTGDVTPDMKSIAKADLIVTTPEKWDGVSRSWQNRSYVQQVTI 1449
Query: 69 IVIDEFHMLNEPQRGPILECVVSKVLYL----KKSIQIFAMSATIGNINALSTFIE---- 120
++IDE H+L E +RGP+LE +VS+ ++ +K +++ +S + N L+ ++
Sbjct: 1450 LIIDEIHLLGE-ERGPVLEVIVSRTNFISSHTEKPVRVVGLSTALANARDLADWLNIKQM 1508
Query: 121 GITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNL 180
G+ N RP+ + V Q F G+ A S+ A+
Sbjct: 1509 GLF---NFRPSVRPVPLEVH---IQGFPGQHYCPRMA-----SMNKPAFQAIRSHSPAK- 1556
Query: 181 MVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQ-------EKEDLIEALKEENDGKLSTN 233
VLIF SS+ AL L F T+E KQ E E++I +++ +N
Sbjct: 1557 PVLIFVSSRRQTRLTALELI--AFLATEEDPKQWLNMDESEMENIIATVRD-------SN 1607
Query: 234 LEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS-- 291
L+ + +G+ HHA L +R+ +EE ++ +Q++ TSTLA GVN PA VII+ +
Sbjct: 1608 LKLTLAFGIGMHHAGLHERDRKTVEELFVNCKVQVLIATSTLAWGVNFPAHLVIIKGTEY 1667
Query: 292 YVG--RDFISLNMYK--QMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISS 347
Y G R ++ + QM+GRAGR + G++++L ++ F P P+ S
Sbjct: 1668 YDGKTRRYVDFPITDVLQMMGRAGRPQFDDQGKAVILVHDIKK--DFYKKFLYEPFPVES 1725
Query: 348 HMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQ 384
+ L D + +A +S +D I T F++
Sbjct: 1726 SL-LGVLSDHLNAEIAGGTITSKQDAMDYITWTYFFR 1761
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 98/375 (26%), Positives = 168/375 (44%), Gaps = 46/375 (12%)
Query: 33 TKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEI-GLIVIDEFHMLNEPQRGPILECVVS 91
+K ++ + + + T EK + + + + +I L+++DE H+L+E RGP+LE +V+
Sbjct: 571 SKSEILRTQMLVTTPEKWDVVTRKSVGDVALSQIVKLLILDEVHLLHE-DRGPVLESIVA 629
Query: 92 KVLYLKKS----IQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSF 147
+ L +S I+I +SAT+ N ++TF+ Y+ D R
Sbjct: 630 RTLRQVESTQSMIRILGLSATLPNYLDVATFLHVNPYIG---------LFFFDGRFRPVP 680
Query: 148 DGKSLTEIYADNLDYSLTGSGP---DAVLHLVQGNLMVLIFCSSKIACSNLALRL----- 199
G++ I + N L + VL V+ V++F ++ A A+ L
Sbjct: 681 LGQTFLGIKSANKMQQLNNMDEVCYENVLKQVKAGHQVMVFVHARNATVRTAMSLIERAK 740
Query: 200 ---QFDRFPGT--KEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGER 254
Q F T +EY EK+ + N + E G + HHA + +R
Sbjct: 741 NCGQISFFSPTQGREYALAEKQ----VQRSRN-----KQVRELFPDGFSIHHAGMLRQDR 791
Query: 255 RLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS--YVGR--DFISLNMYK--QMVG 308
L+E + G ++++ CT+TLA GVNLPA VII+ + Y + F+ L + Q+ G
Sbjct: 792 NLVENLFSNGHIKVLVCTATLAWGVNLPAHAVIIKGTQIYAAKRGSFVDLGILDVMQIFG 851
Query: 309 RAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAANLCS 368
RAGR + GE I++ T D L + PI S +L D + +A +
Sbjct: 852 RAGRPQFDKFGEGIII--TTHDKLSHYLTLLTQRNPIESQF-LESLADNLNAEIALGTVT 908
Query: 369 SLEDVKTLIKHTLFY 383
++E+ I +T Y
Sbjct: 909 NVEEAVKWISYTYLY 923
>gi|345005998|ref|YP_004808851.1| DEAD/DEAH box helicase [halophilic archaeon DL31]
gi|344321624|gb|AEN06478.1| DEAD/DEAH box helicase domain protein [halophilic archaeon DL31]
Length = 789
Score = 112 bits (281), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 110/398 (27%), Positives = 186/398 (46%), Gaps = 64/398 (16%)
Query: 26 VKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLI------VIDEFHMLNE 79
V G+ R+ + I + T EK S +++ G I +IDE H+L+
Sbjct: 103 VTGERDLNPRRAERADILVMTPEK----TDSATRKHESARYGFITDVDCCIIDEVHLLDS 158
Query: 80 PQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEG-----ITYVENSRPT--- 131
+RG +LE VS++ L ++ A+SAT+ NI ++ +++ + E+ RP
Sbjct: 159 EKRGSVLEVTVSRLRRLCDP-RVVALSATMPNIEDVAEWLDAPPESTFAFDESYRPVDLE 217
Query: 132 ------KHSEYVTVDK--RVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVL 183
+H E DK R++++ D L++ + ++ + L
Sbjct: 218 TGVKTYRHGENSFADKYRRLYRALD---LSKPH-------------------IREDGQAL 255
Query: 184 IFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKE-ENDGKLSTNLEECILYGV 242
+F SS+ A + + + E + + D A KE END L + ++ GV
Sbjct: 256 VFVSSRQDTVMAAKKARDETTDWEIEMGSRGEYDFHTAAKEVEND-----TLRQSVVDGV 310
Query: 243 AYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYV-----GRDF 297
A+HHA L+ ++ L+E + G +Q++ TSTLA GVNLPA+ V+IRD+ G
Sbjct: 311 AFHHAGLSRNDKALVENWFKEGKIQLLFSTSTLAWGVNLPARCVVIRDTKYHDPLEGEVD 370
Query: 298 ISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDL 357
IS QM+GRAGR G + G ++C + + ++ ++ G E I S ++ L
Sbjct: 371 ISPLDVLQMLGRAGRPGYDDVGYGWVVCDSSE-ADKYRRLLREGKE-IESTLEGDLDTHL 428
Query: 358 ILEVVAANLCSSLEDVKTLIKHTLFY-QLKSPEDQQTF 394
E VA S LE+V + ++ T +Y + KS DQ F
Sbjct: 429 NAE-VAMGTVSDLEEVMSWVETTFYYVRAKSEPDQYDF 465
>gi|297291414|ref|XP_002803889.1| PREDICTED: activating signal cointegrator 1 complex subunit 3-like
[Macaca mulatta]
Length = 2185
Score = 112 bits (281), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 107/398 (26%), Positives = 185/398 (46%), Gaps = 53/398 (13%)
Query: 14 EEFKFYLEEYAGVK-----GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGL 68
+++K +EE G K G P + + K + + T EK + S + + ++ +
Sbjct: 1373 DDWKVRIEEKLGKKVIELTGDVTPDMKSIAKADLIVTTPEKWDGVSRSWQNRSYVQQVTI 1432
Query: 69 IVIDEFHMLNEPQRGPILECVVSKVLYL----KKSIQIFAMSATIGNINALSTFIE---- 120
++IDE H+L E +RGP+LE +VS+ ++ +K ++I +S + N L+ ++
Sbjct: 1433 LIIDEIHLLGE-ERGPVLEVIVSRTNFISSHTEKPVRIVGLSTALANARDLADWLNIKQM 1491
Query: 121 GITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNL 180
G+ N RP+ + V Q F G+ A S+ A+
Sbjct: 1492 GLF---NFRPSVRPVPLEVH---IQGFPGQHYCPRMA-----SMNKPAFQAIRSHSPAK- 1539
Query: 181 MVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQ-------EKEDLIEALKEENDGKLSTN 233
VLIF SS+ AL L F T+E KQ E E++I +++ +N
Sbjct: 1540 PVLIFVSSRRQTRLTALELI--AFLATEEDPKQWLNMDEREMENIIATVRD-------SN 1590
Query: 234 LEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS-- 291
L+ + +G+ HHA L +R+ +EE ++ +Q++ TSTLA GVN PA VII+ +
Sbjct: 1591 LKLTLAFGIGMHHAGLHERDRKTVEELFVNCKVQVLIATSTLAWGVNFPAHLVIIKGTEY 1650
Query: 292 YVGR-----DFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPIS 346
Y G+ DF ++ QM+GRAGR + G++++L ++ F P P+
Sbjct: 1651 YDGKTRRYVDFPITDVL-QMMGRAGRPQFDDQGKAVILVHDIKK--DFYKKFLYEPFPVE 1707
Query: 347 SHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQ 384
S + L D + +A +S +D I T F++
Sbjct: 1708 SSL-LGVLSDHLNAEIAGGTITSKQDALDYITWTYFFR 1744
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 94/368 (25%), Positives = 167/368 (45%), Gaps = 32/368 (8%)
Query: 33 TKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEI-GLIVIDEFHMLNEPQRGPILECVVS 91
+K ++ + + + T EK + + + + +I L+++DE H+L+E RGP+LE +V+
Sbjct: 554 SKSEILRTQMLVTTPEKWDVVTRKSVGDVALSQIVKLLILDEVHLLHE-DRGPVLESIVA 612
Query: 92 KVLYLKKS----IQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSF 147
+ L +S I+I +SAT+ N ++TF+ Y+ D R
Sbjct: 613 RTLRQVESTQSMIRILGLSATLPNYLDVATFLHVNPYIG---------LFFFDGRFRPVP 663
Query: 148 DGKSLTEIYADNLDYSLTGSGP---DAVLHLVQGNLMVLIFCSSKIACSNLALRLQFDRF 204
G++ I N L + VL V+ V++F ++ A A+ L +R
Sbjct: 664 LGQTFLGIKCTNKMQQLNNMDEVCYENVLKQVKAGHQVMVFVHARNATVRTAMSL-IERA 722
Query: 205 PGTKE---YKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAY 261
+ + D + A K+ + + + E G + HHA + +R L+E +
Sbjct: 723 KNCGHIPFFSPTQGHDYVLAEKQVQRSR-NKQVRELFPDGFSIHHAGMLRQDRNLVENLF 781
Query: 262 LAGTLQIICCTSTLAAGVNLPAQRVIIRDS--YVGR--DFISLNMYK--QMVGRAGRTGL 315
G ++++ CT+TLA GVNLPA VII+ + Y + F+ L + Q+ GRAGR
Sbjct: 782 SNGHIKVLVCTATLAWGVNLPAHAVIIKGTQIYAAKRGSFVDLGILDVMQIFGRAGRPQF 841
Query: 316 QESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKT 375
+ GE I++ T D L + PI S +L D + +A +++E+
Sbjct: 842 DKFGEGIII--TTHDKLSHYLTLLTQRNPIESQF-LESLADNLNAEIALGTVTNVEEAVK 898
Query: 376 LIKHTLFY 383
I +T Y
Sbjct: 899 WISYTYLY 906
>gi|402867753|ref|XP_003898000.1| PREDICTED: activating signal cointegrator 1 complex subunit 3-like,
partial [Papio anubis]
Length = 1623
Score = 112 bits (281), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 105/397 (26%), Positives = 184/397 (46%), Gaps = 51/397 (12%)
Query: 14 EEFKFYLEEYAGVK-----GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGL 68
+++K +EE G K G P + + K + + T EK + S + + ++ +
Sbjct: 811 DDWKVRIEEKLGKKVIELTGDVTPDMKSIAKADLIVTTPEKWDGVSRSWQNRSYVQQVTI 870
Query: 69 IVIDEFHMLNEPQRGPILECVVSKVLYL----KKSIQIFAMSATIGNINALSTFIE---- 120
++IDE H+L E +RGP+LE +VS+ ++ +K ++I +S + N L+ ++
Sbjct: 871 LIIDEIHLLGE-ERGPVLEVIVSRTNFISSHTEKPVRIVGLSTALANARDLADWLNIKQM 929
Query: 121 GITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNL 180
G+ N RP+ + V Q F G+ A S+ A+
Sbjct: 930 GLF---NFRPSVRPVPLEVH---IQGFPGQHYCPRMA-----SMNKPAFQAIRSHSPAK- 977
Query: 181 MVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQ-------EKEDLIEALKEENDGKLSTN 233
VLIF SS+ AL L F T+E KQ E E++I +++ +N
Sbjct: 978 PVLIFVSSRRQTRLTALELI--AFLATEEDPKQWLNMDEREMENIIATVRD-------SN 1028
Query: 234 LEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS-- 291
L+ + +G+ HHA L +R+ +EE ++ +Q++ TSTLA GVN PA VI++ +
Sbjct: 1029 LKLTLAFGIGMHHAGLHERDRKTVEELFVNCKVQVLIATSTLAWGVNFPAHLVIVKGTEY 1088
Query: 292 YVG--RDFISLNMYK--QMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISS 347
Y G R ++ + QM+GRAGR + G++++L ++ F P P+ S
Sbjct: 1089 YDGKTRRYVDFPITDVLQMMGRAGRPQFDDQGKAVILVHDIKK--DFYKKFLYEPFPVES 1146
Query: 348 HMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQ 384
+ L D + +A +S +D I T F++
Sbjct: 1147 SL-LGVLSDHLNAEIAGGTITSKQDALDYITWTYFFR 1182
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 91/339 (26%), Positives = 158/339 (46%), Gaps = 41/339 (12%)
Query: 66 IGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKS----IQIFAMSATIGNINALSTFIE- 120
+ L+++DE H+L+E RGP+LE +V++ L +S I+I +SAT+ N ++TF+
Sbjct: 26 VKLLILDEVHLLHE-DRGPVLESIVARTLRQVESTQSMIRILGLSATLPNYLDVATFLHV 84
Query: 121 ----GITYVENS-RPTKHSEYVTVDKRVFQSFDGKSLTEIYA--DNLDYSLTGSGPDAVL 173
G+ + + RP + Q+F G T +N+D + VL
Sbjct: 85 NPYIGLFFFDGRFRPVP----------LGQTFLGIKCTNKMQQLNNMDEVCY----ENVL 130
Query: 174 HLVQGNLMVLIFCSSKIACSNLALRLQFDRFPGTKE---YKKQEKEDLIEALKEENDGKL 230
V+ V++F ++ A A+ L +R + + D + A K+ +
Sbjct: 131 KQVKAGHQVMVFVHARNATVRTAMSL-IERAKNCGHIPFFSPTQGHDYVLAEKQVQRSR- 188
Query: 231 STNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRD 290
+ + E G + HHA + +R L+E + G ++++ CT+TLA GVNLPA VII+
Sbjct: 189 NKQVRELFPDGFSIHHAGMLRQDRNLVENLFSNGHIKVLVCTATLAWGVNLPAHAVIIKG 248
Query: 291 S--YVGR--DFISLNMYK--QMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEP 344
+ Y + F+ L + Q+ GRAGR + GE I++ T D L + P
Sbjct: 249 TQIYAAKRGSFVDLGILDVMQIFGRAGRPQFDKFGEGIII--TTHDKLSHYLTLLTQRNP 306
Query: 345 ISSHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFY 383
I S +L D + +A +++E+ I +T Y
Sbjct: 307 IESQF-LESLADNLNAEIALGTVTNVEEAVKWISYTYLY 344
>gi|168027750|ref|XP_001766392.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682301|gb|EDQ68720.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 2111
Score = 112 bits (281), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 111/380 (29%), Positives = 175/380 (46%), Gaps = 40/380 (10%)
Query: 28 GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILE 87
G + P R L I I T EK + + + + ++GL+VIDE H+L RGPILE
Sbjct: 1385 GDFTPDMRALLAADIIISTPEKWDGISRNWHNRSYVTKVGLMVIDEIHLLGA-DRGPILE 1443
Query: 88 CVVSKVLYLKKS----IQIFAMSATIGNINALSTFIEGITYVE--NSRPTKHSEYVTVDK 141
+VS++ Y+ ++ +S + N L+ ++ GI V N +P+ + V
Sbjct: 1444 VIVSRMRYISSQTGAPVRFIGLSTALANARDLANWL-GIEEVGLYNFKPSVRPVPLEVH- 1501
Query: 142 RVFQSFDGKSLTEIYADNLDYSLTGSGPD-AVLHLVQGNLMVLIFCSSKIACSNLALRLQ 200
Q + GK Y ++ + + P A + VLIF SS+ AL L
Sbjct: 1502 --IQGYPGK----FYCPRMN---SMNKPTYAAITTHSPFKPVLIFVSSRRQTRLTALDLI 1552
Query: 201 FDRFPGTKEYKKQEKEDLIEALKEENDGKLST----NLEECILYGVAYHHADLTAGERRL 256
++ E +Q + +E D LS NL+ + +GV HHA L +R L
Sbjct: 1553 --QYASADERPRQ----FVNMTDDEMDMVLSQVQDENLKHTLQFGVGLHHAGLNDRDRSL 1606
Query: 257 IEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS--YVGR-----DFISLNMYKQMVGR 309
+EE + +QI+ CTSTLA GVNLPA V+I+ + + G+ DF ++ QM+GR
Sbjct: 1607 VEELFTNTKIQILVCTSTLAWGVNLPAHLVVIKGTEFFDGKTKRYVDFPITDVL-QMMGR 1665
Query: 310 AGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAANLCSS 369
AGR + G++++L + F P P+ S + EVVA + S
Sbjct: 1666 AGRPQYDQHGKAVILVHDPKK--SFYKKFLYEPFPVESMLTHHLHDHFNAEVVAGTISSK 1723
Query: 370 LEDVKTLIKHTLFYQL-KSP 388
+ + L LF +L K+P
Sbjct: 1724 QDAIDYLTWTYLFRRLVKNP 1743
Score = 89.0 bits (219), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 102/398 (25%), Positives = 172/398 (43%), Gaps = 80/398 (20%)
Query: 33 TKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSK 92
TKR+L + + + T EK + + L++IDE H+LN+ RGP++E +V++
Sbjct: 548 TKRELEETQMIVTTPEKWDVITRKSSDMALATLVKLLIIDEVHLLND-DRGPVIETLVAR 606
Query: 93 VLYLKKS----IQIFAMSATIGNINALSTFIE-----GITYVENS-RPTKHSE-YVTVDK 141
L +S I+I +SAT+ N ++ F+ G+ Y + S RP S+ Y+ + +
Sbjct: 607 TLRQVESTQSMIRIVGLSATLPNYLEVAQFLRVNAETGLFYFDASYRPVPLSQQYIGITE 666
Query: 142 RVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRLQF 201
+ F L + + Y+ V+ ++ ++F S+
Sbjct: 667 QNF------VLRNQLMNEVCYT-------KVMEAIKRGQQAMVFVHSR------------ 701
Query: 202 DRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGV------------------- 242
K+ K + L+E + N L T++ E LYG+
Sbjct: 702 ------KDTVKSARS-LVEIAQRNNQLSLLTDVSELPLYGMMKKEVTKSRNRELVELFGS 754
Query: 243 --AYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIR-----DSYVG- 294
HHA + +R L E + G ++++ CT+TLA GVNLPA V+I+ D G
Sbjct: 755 AFGVHHAGMLRSDRNLTERLFSEGMIKVLVCTATLAWGVNLPAHMVVIKGTQLYDPKAGG 814
Query: 295 -RDFISLNMYKQMVGRAGRTGLQESGESIMLC--KTMQDFLRFSSMMNAGPEPISSHMDP 351
R+ L++ Q+ GRAGR SGE I++ + +LR + PI S
Sbjct: 815 WRELGMLDVM-QIFGRAGRPQFDTSGEGIIITTHNKLSHYLRLLTHQ----LPIESQFVT 869
Query: 352 PTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQ-LKSP 388
+L EVV + + E + L LF + LK+P
Sbjct: 870 SLKDNLNAEVVLGTVTNVKEAIAWLGYTYLFVRMLKNP 907
>gi|410076216|ref|XP_003955690.1| hypothetical protein KAFR_0B02580 [Kazachstania africana CBS 2517]
gi|372462273|emb|CCF56555.1| hypothetical protein KAFR_0B02580 [Kazachstania africana CBS 2517]
Length = 2160
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 108/387 (27%), Positives = 187/387 (48%), Gaps = 34/387 (8%)
Query: 23 YAGVK-----GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHML 77
Y G+K G TK+Q+ + I + T EK + + + + + LI+IDE H+L
Sbjct: 577 YLGIKVAELTGDTRLTKQQIAETQILVTTPEKWDIITRKMDESSFAQLVRLIIIDEVHLL 636
Query: 78 NEPQRGPILECVVSKVLYLKKSIQ---IFAMSATIGNINALSTFIEGITYVENSRPTKHS 134
++ QRGP+LE +V++ L+ + I+ + A+SAT+ N ++ F+ P H
Sbjct: 637 HD-QRGPVLESIVARTLWSAQVIERPRLVALSATLPNYRDVARFLRV--------PEDHV 687
Query: 135 EYVTVDKR---VFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIA 191
Y + R + Q F G + E ++ + D V+ + N +++F S+
Sbjct: 688 FYFSSSFRPCPLAQQFCG--VKEKSPLKRRSAMNDACYDKVVESLTENHQIIVFVHSRKD 745
Query: 192 CSNLALRLQFDRFPGTKEYKK--QEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADL 249
A L+ D+ +++K + L+ E++ S L+ + YG+ HHA L
Sbjct: 746 TIRTAKWLK-DKLLENDQHEKLLKSSSGSKAILESESENVESPALKPILKYGIGIHHAGL 804
Query: 250 TAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYV----GRDFISLNMYK- 304
+ +R L E+ + G LQI+ T+TLA GVNLPA VII+ + V D+ L+
Sbjct: 805 SKNDRALSEDLFADGVLQILVSTATLAWGVNLPAHTVIIKGTDVYSPEKGDWEQLSPQDI 864
Query: 305 -QMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVA 363
QM+GRAGR +GE I++ D + +++N PI S + ++ EVV+
Sbjct: 865 LQMLGRAGRPRYDTNGEGIIIT-NQSDVQYYLAVLNQQL-PIESRFVSKLIDNINAEVVS 922
Query: 364 ANLCSSLEDVKTLIKHTLFYQ-LKSPE 389
++ S + V L L+ + L +PE
Sbjct: 923 GSIKSRADAVDWLSFTYLYVRMLTAPE 949
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 113/272 (41%), Gaps = 33/272 (12%)
Query: 14 EEFKFYLEEYAGVK-----GQYPPTK-RQLNKKSIYICTIEKGSKLIGSLIQENRIDEIG 67
E++ L + AG K G PT R +N + + T E+ + Q I +
Sbjct: 1406 EDWNHRLSKVAGGKVIHKLGDNTPTNLRLINTSHLILSTPEQFDLVSRRWRQRKSIHALE 1465
Query: 68 LIVIDEFHMLNEPQRGPILECVVSKVLY----LKKSIQIFAMSATIGNINALSTFIEGIT 123
L++ D+ H + +G + E V+S++++ L+KS++I A+S + N S +I G+
Sbjct: 1466 LLIFDDAHQVGNGIQGAVYENVISRMMFISIQLEKSMRIVALSTCLSNARDFSDWI-GVK 1524
Query: 124 Y--VENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLM 181
+ N P + V Q+F+ T +D + L + N
Sbjct: 1525 KENIYNFSPEVRINPLQVH---LQAFNIGEDTHATIPMIDLAFK-----TALETMSSNST 1576
Query: 182 VLIFCSSKIACSNLALRL----QFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEEC 237
+I+ ++ C + RL + +R E+ E + A+ E+ L+
Sbjct: 1577 AIIYVPTRKECIRVFSRLSHISKSNRL-EIPEFTFDELQPFTTAVHEKA-------LKNM 1628
Query: 238 ILYGVAYHHADLTAGERRLIEEAYLAGTLQII 269
+ GV + + A +RR+I E Y G L ++
Sbjct: 1629 LANGVGMLYKAMDANDRRIIVELYQQGILSLL 1660
>gi|315046276|ref|XP_003172513.1| pre-mRNA-splicing factor brr2 [Arthroderma gypseum CBS 118893]
gi|311342899|gb|EFR02102.1| pre-mRNA-splicing factor brr2 [Arthroderma gypseum CBS 118893]
Length = 2213
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 123/475 (25%), Positives = 220/475 (46%), Gaps = 54/475 (11%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V E+ + K + + + E G + TK+Q+ + + T EK +
Sbjct: 601 LVQEQVGNFGKRLQHYGIKVSELTGDRQL---TKQQIADTQLIVTTPEKWDIITRKATDT 657
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVL----YLKKSIQIFAMSATIGNINALS 116
+ + L++IDE H+L++ +RGP+LE +VS+ + + +++ +SAT+ N +
Sbjct: 658 SYTRLVRLVIIDEIHLLHD-ERGPVLESIVSRTIRKTEQTGEPVRLVGLSATLPNYRDVG 716
Query: 117 TF-----IEGITYVENS-RPTK-HSEYVTV-DKRVFQSFDGKSLTEI-YADNLDYSLTGS 167
+F I G+ + + + RP E++ V DK+ + K++ +I Y LD G+
Sbjct: 717 SFLRVDPIHGLFHFDGTFRPCPLKQEFIGVTDKKAIKQL--KTMNDICYTKVLDQ--VGA 772
Query: 168 GPDAVLHLVQGNLMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEA--LKEE 225
+ +LIF S+ A R D+ T+ + + D L EE
Sbjct: 773 NKN----------QMLIFVHSRKETLKTA-RYIRDKAVETETIGQILRSDAASRAILAEE 821
Query: 226 NDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQR 285
D L + + YG HHA ++ +R +E+ + G+LQ++ CT+TLA GVNLPA
Sbjct: 822 ADSVNDPGLRDLMPYGFGIHHAGMSKADRTSVEDLFADGSLQVLVCTATLAWGVNLPAHC 881
Query: 286 VIIRDSYV----GRDFISLNMYK--QMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMN 339
VII+ + V ++ L+ QM+GRAGR GE I++ T + + S++N
Sbjct: 882 VIIKGTQVYSPEKGSWVELSPQDVLQMLGRAGRPQYDSFGEGIIIT-TQGELQYYLSLLN 940
Query: 340 AGPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQ-LKSPE--------D 390
PI S + +L E+V N+ S E ++ L LF + L+SP +
Sbjct: 941 QQ-LPIESQLMSKLADNLNAEIVLGNVRSREEGMEWLGYTYLFVRMLRSPGLYSIGADYE 999
Query: 391 QQTFLETTLSEIV--ASLLASKGTMLTMN-EAGHLSLTSIAKAAVQAGLSHDVCL 442
T LE +++ A+++ K ++ + + G L T + + A +SH L
Sbjct: 1000 HDTSLEQRRVDLIHSAAMILEKSNLVKYDRKTGKLQATELGRIASHYYISHSSML 1054
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 98/206 (47%), Gaps = 19/206 (9%)
Query: 234 LEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVII--RDS 291
L E I +G+ Y+H L+ G++R++ Y G LQ++ + + ++L A VII S
Sbjct: 1667 LAESISHGIGYYHEALSTGDKRIVSHLYKIGALQVMLASRDVCWELDLTAHLVIIMGTQS 1726
Query: 292 YVGRDFISLNM----YKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISS 347
+ GR+ L+ QM G+A R G+ +++ ++ + +N P+ S
Sbjct: 1727 FDGREHRYLDYPISEILQMFGKATRPREDRIGKGVLMVPAVKREY-YKKFLNEA-LPMES 1784
Query: 348 HMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQ--LKSP------EDQQTFLETTL 399
H+ L D + ++ +S +D + ++ FY+ L +P + L T L
Sbjct: 1785 HLQ-LYLHDAFVTEISTKTITSTQDAVDWMTYSYFYRRLLANPSYYGLTDVSHEGLSTFL 1843
Query: 400 SEIVASLLA--SKGTMLTMNEAGHLS 423
SE+V + L ++ ++ M+E ++S
Sbjct: 1844 SELVENTLKELAEAQIVDMDEDENIS 1869
>gi|340521516|gb|EGR51750.1| predicted protein [Trichoderma reesei QM6a]
Length = 1987
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 104/383 (27%), Positives = 185/383 (48%), Gaps = 49/383 (12%)
Query: 33 TKRQLNKKSIYICTIEKGSKLIGSLIQENR-IDEIGLIVIDEFHMLNEPQRGPILECVVS 91
TK ++ + I + T EK + + + ++ L++IDE HML++ +RG +LE +V+
Sbjct: 375 TKAEIVQTQIIVTTPEKWDVVTRKGTGDTELVQKVRLLIIDEVHMLHD-ERGAVLESLVA 433
Query: 92 K----VLYLKKSIQIFAMSATIGNINALSTFIE-----GITYVENS-RPTKHSEYVTVDK 141
+ V + I+I +SAT+ N ++ F++ G+ Y + S RP ++
Sbjct: 434 RTERQVESTQSLIRIIGLSATLPNYVDVADFLKVNKYAGLFYFDASFRPVPLEQH----- 488
Query: 142 RVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRL-- 199
F GK+ ++ DNLD D V ++Q + V++F S+ A L
Sbjct: 489 --FIGVKGKAGSKTSKDNLD----NVAFDKVKEMLQRDHQVMVFVHSRRDTMVTARMLHQ 542
Query: 200 ----QF--DRF-PGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAG 252
QF D F P + Q D+ ++ S ++ + + G+ HHA +
Sbjct: 543 KAIEQFCVDLFDPTGHPHYGQASRDMNQSR--------SKDIRDLLPKGIGVHHAGMARA 594
Query: 253 ERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS--YVGRD--FISLNMYK--QM 306
+R L+E + G L+++CCT+TLA GVNLPA V+I+ + Y +D F+ L++ Q+
Sbjct: 595 DRNLMERLFADGVLKVLCCTATLAWGVNLPAAAVVIKGTQVYSAQDGKFVDLSILDVLQI 654
Query: 307 VGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAANL 366
GRAGR +++G M+C T+ + S + +PI S + +L E+ +
Sbjct: 655 FGRAGRPQFEDTGIG-MICTTLDKLPHYLSAITEQ-QPIESKFSTKLVDNLNAEIALGTV 712
Query: 367 CSSLEDVKTLIKHTLFYQL-KSP 388
S E V+ + LF ++ +SP
Sbjct: 713 TSIPEAVQWIGYSYLFVRMQRSP 735
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 90/331 (27%), Positives = 146/331 (44%), Gaps = 50/331 (15%)
Query: 28 GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILE 87
G P R + I I T EK + S + ++ L++IDE H+L RGPILE
Sbjct: 1212 GDNTPDTRTIKDADIIITTPEKWDGISRSWQTRGYVRQVSLVIIDEIHLLAG-DRGPILE 1270
Query: 88 CVVSKVLYL----KKSIQIFAMSATIGNINALSTFI---EGITYVENS-RPTKHSEYVT- 138
+VS++ Y+ K +++ MS N L+ ++ EG+ +S RP Y+
Sbjct: 1271 IIVSRMNYISSSTKNKVRLLGMSTACANATDLANWLGVKEGLFNFRHSVRPVPLELYIDG 1330
Query: 139 -VDKRVF----QSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSK---- 189
+ R F QS + + I P+ V++F +S+
Sbjct: 1331 FPELRGFCPLMQSMNRPTFLAI---------KNHSPEKP---------VIVFVASRRQTR 1372
Query: 190 IACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADL 249
+ +L + P + + + +++DL L D L+E I +G+ HHA L
Sbjct: 1373 LTAKDLINYCGMEDNP--RRFLRMDEDDLQLNLSRVKD----EALKEAINFGIGLHHAGL 1426
Query: 250 TAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYV------GRDFISLNMY 303
+R++ EE +L +QI+ TSTLA GVNLPA V+++ + G + L
Sbjct: 1427 VESDRQIAEELFLNNKIQILVATSTLAWGVNLPAHLVVVKGTQFYDAKTSGYKDMDLTDV 1486
Query: 304 KQMVGRAGRTGLQESGES-IMLCKTMQDFLR 333
QM+GRAGR SG + I +DF +
Sbjct: 1487 LQMLGRAGRPQFDNSGVARIFTQDAKKDFYK 1517
>gi|85096049|ref|XP_960191.1| hypothetical protein NCU09793 [Neurospora crassa OR74A]
gi|28921672|gb|EAA30955.1| hypothetical protein NCU09793 [Neurospora crassa OR74A]
Length = 1453
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 93/317 (29%), Positives = 151/317 (47%), Gaps = 27/317 (8%)
Query: 35 RQLNKKSIYICTIEKGSKLIGSLIQENRIDE-IGLIVIDEFHMLNEPQRGPILECVVSKV 93
R++ + SI + T EK + R+ + + L +IDE H+L + RG LE VVS++
Sbjct: 259 RRVGEASIIVTTPEKWDSITRKWQDHRRLLQLVELFLIDEVHILKD-VRGATLEAVVSRM 317
Query: 94 LYLKKSIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSFDGKSLT 153
+ +++ A+SAT+ N + ++ ++ G + P Y V F+ +
Sbjct: 318 KTIGANVRFVALSATVPNSDDIAKWL-GRNHTTQQLPA----YREVFGEEFRPVKLQKFV 372
Query: 154 EIYADN-----LDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRLQFDRFPGTK 208
Y N D L G P +L LIFC ++ +C + A +L + G
Sbjct: 373 YGYECNGNDFIFDRFLDGKLP-TLLSKHNQRKPTLIFCFTRKSCESTATKLA-EHASGLS 430
Query: 209 EYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQI 268
E + + + LS L+E + +GVA+HHA L +R IE+ +L G L +
Sbjct: 431 ETNS------LWPIPTKRIPVLSRELQEIVRFGVAFHHAGLDVQDRIAIEQHFLNGELSV 484
Query: 269 ICCTSTLAAGVNLPAQRVIIRDSYVGRDFISLNMYK-----QMVGRAGRTGLQESGESIM 323
ICCTSTLA GVNLP V+++ + D L Y QM+GRAGR S +I+
Sbjct: 485 ICCTSTLAVGVNLPCHTVVMKGTVAFMD-DKLQEYSDLEIMQMLGRAGRPQFDTSATAII 543
Query: 324 LCKTMQDFLRFSSMMNA 340
L + + LR+ +M++
Sbjct: 544 LTRAA-NKLRYENMVSG 559
>gi|383409161|gb|AFH27794.1| activating signal cointegrator 1 complex subunit 3 isoform a [Macaca
mulatta]
Length = 2202
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 106/397 (26%), Positives = 184/397 (46%), Gaps = 51/397 (12%)
Query: 14 EEFKFYLEEYAGVK-----GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGL 68
+++K +EE G K G P + + K + + T EK + S + + ++ +
Sbjct: 1390 DDWKVRIEEKLGKKVIELTGDVTPDMKSIAKADLIVTTPEKWDGVSRSWQNRSYVQQVTI 1449
Query: 69 IVIDEFHMLNEPQRGPILECVVSKVLYL----KKSIQIFAMSATIGNINALSTFIE---- 120
++IDE H+L E +RGP+LE +VS+ ++ +K ++I +S + N L+ ++
Sbjct: 1450 LIIDEIHLLGE-ERGPVLEVIVSRTNFISSHTEKPVRIVGLSTALANARDLADWLNIKQM 1508
Query: 121 GITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNL 180
G+ N RP+ + V Q F G+ A S+ A+
Sbjct: 1509 GLF---NFRPSVRPVPLEVH---IQGFPGQHYCPRMA-----SMNKPAFQAIRSHSPAK- 1556
Query: 181 MVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQ-------EKEDLIEALKEENDGKLSTN 233
VLIF SS+ AL L F T+E KQ E E++I +++ +N
Sbjct: 1557 PVLIFVSSRRQTRLTALELI--AFLATEEDPKQWLNMDEREMENIIATVRD-------SN 1607
Query: 234 LEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS-- 291
L+ + +G+ HHA L +R+ +EE ++ +Q++ TSTLA GVN PA VII+ +
Sbjct: 1608 LKLTLAFGIGMHHAGLHERDRKTVEELFVNCKVQVLIATSTLAWGVNFPAHLVIIKGTEY 1667
Query: 292 YVG--RDFISLNMYK--QMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISS 347
Y G R ++ + QM+GRAGR + G++++L ++ F P P+ S
Sbjct: 1668 YDGKTRRYVDFPITDVLQMMGRAGRPQFDDQGKAVILVHDIKK--DFYKKFLYEPFPVES 1725
Query: 348 HMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQ 384
+ L D + +A +S +D I T F++
Sbjct: 1726 SL-LGVLSDHLNAEIAGGTITSKQDALDYITWTYFFR 1761
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 94/368 (25%), Positives = 167/368 (45%), Gaps = 32/368 (8%)
Query: 33 TKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEI-GLIVIDEFHMLNEPQRGPILECVVS 91
+K ++ + + + T EK + + + + +I L+++DE H+L+E RGP+LE +V+
Sbjct: 571 SKSEILRTQMLVTTPEKWDVVTRKSVGDVALSQIVKLLILDEVHLLHE-DRGPVLESIVA 629
Query: 92 KVLYLKKS----IQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSF 147
+ L +S I+I +SAT+ N ++TF+ Y+ D R
Sbjct: 630 RTLRQVESTQSMIRILGLSATLPNYLDVATFLHVNPYIG---------LFFFDGRFRPVP 680
Query: 148 DGKSLTEIYADNLDYSLTGSGP---DAVLHLVQGNLMVLIFCSSKIACSNLALRLQFDRF 204
G++ I N L + VL V+ V++F ++ A A+ L +R
Sbjct: 681 LGQTFLGIKCTNKMQQLNNMDEVCYENVLKQVKAGHQVMVFVHARNATVRTAMSL-IERA 739
Query: 205 PGTKE---YKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAY 261
+ + D + A K+ + + + E G + HHA + +R L+E +
Sbjct: 740 KNCGHIPFFSPTQGHDYVLAEKQVQRSR-NKQVRELFPDGFSIHHAGMLRQDRNLVENLF 798
Query: 262 LAGTLQIICCTSTLAAGVNLPAQRVIIRDS--YVGR--DFISLNMYK--QMVGRAGRTGL 315
G ++++ CT+TLA GVNLPA VII+ + Y + F+ L + Q+ GRAGR
Sbjct: 799 SNGHIKVLVCTATLAWGVNLPAHAVIIKGTQIYAAKRGSFVDLGILDVMQIFGRAGRPQF 858
Query: 316 QESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKT 375
+ GE I++ T D L + PI S +L D + +A +++E+
Sbjct: 859 DKFGEGIII--TTHDKLSHYLTLLTQRNPIESQF-LESLADNLNAEIALGTVTNVEEAVK 915
Query: 376 LIKHTLFY 383
I +T Y
Sbjct: 916 WISYTYLY 923
>gi|342876151|gb|EGU77809.1| hypothetical protein FOXB_11673 [Fusarium oxysporum Fo5176]
Length = 2209
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 117/466 (25%), Positives = 217/466 (46%), Gaps = 58/466 (12%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V E+ +L E + + E G + TK+Q+ + I + T EK +
Sbjct: 593 LVQEQVGNLGGRLEPYGIRVAELTGDRQL---TKQQIAETQIIVTTPEKWDVITRKSNDL 649
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVL----YLKKSIQIFAMSATIGNINALS 116
+ + LI+IDE H+L++ RGP+LE +VS+ + + ++I +SAT+ N ++
Sbjct: 650 TYTNLVRLIIIDEIHLLHD-DRGPVLESIVSRTIRKTEQTGEPVRIIGLSATLPNYKDVA 708
Query: 117 TFI-----EGITYVENS-RPTK-HSEYVTV-DKRVFQSFDGKSLTEIYADNLDYSLTGSG 168
+F+ +G+ + + S RP E+V V D++ + K++ ++ + +
Sbjct: 709 SFLRVDTKKGLFHFDGSFRPCPLRQEFVGVTDRKAIKQL--KTMNDVCYNKV-------- 758
Query: 169 PDAVLHLVQGNLMVLIFCSSKIACSNLA--LR---LQFDRFPGTKEYKKQEKEDLIEALK 223
+ H+ +LIF S+ + A +R L+ D + +E L EA
Sbjct: 759 ---IEHVGTNRNQMLIFVHSRKETAKTARYIRDKALESDTINQILRHDAGSREVLNEASS 815
Query: 224 EENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPA 283
+ D +L++ + YG HHA ++ +R +E + G +Q++ CT+TLA GVNLPA
Sbjct: 816 QATD----QDLKDILPYGFGIHHAGMSRADRTDVENLFAHGAIQVLVCTATLAWGVNLPA 871
Query: 284 QRVIIRDSYV----GRDFISLNMYK--QMVGRAGRTGLQESGESIMLCKTMQDFLRFSSM 337
V+I+ + V ++ L+ QM+GRAGR GE I++ T + + S+
Sbjct: 872 HTVVIKGTQVYSPEKGSWVELSPQDVLQMLGRAGRPQYDTYGEGIIIT-TQSEMQYYLSL 930
Query: 338 MNAGPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLF---------YQLKSP 388
+N PI S + +L E+V N+ + E V+ L LF YQ+ +
Sbjct: 931 LNQQ-LPIESQFVSKLVDNLNAEIVLGNVRTRDEGVEWLGYTYLFVRMLRSPGLYQVGAE 989
Query: 389 EDQQTFLETTLSEIV--ASLLASKGTMLTMNE-AGHLSLTSIAKAA 431
+ LE +++ A+++ K ++ +E G L T + + A
Sbjct: 990 YEDDVALEQKRVDLIHSAAMVLRKSNLIKYDEKTGKLQSTELGRIA 1035
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 75/365 (20%), Positives = 151/365 (41%), Gaps = 38/365 (10%)
Query: 37 LNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYL 96
L K + + T + L + + + L + DE H+L Q G + E +VS++ Y+
Sbjct: 1469 LEKGDLILATPTQWDVLSRQWKRRKNVQTVELFIADEVHLLGSSQ-GYVYETIVSRMHYI 1527
Query: 97 KKS----IQIFAMSATIGNINALSTFIEGITY-VENSRPTKHSEYVTVDKRVFQSFDGKS 151
+ ++I A+S ++ N + +I+ + + N P + + + F + S
Sbjct: 1528 RTQTELPLRIVALSVSLANARDIGEWIDAKKHDIYNFSPHVRPVPLELHLQSFTNTHFPS 1587
Query: 152 LTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRLQFDRFPGTKEYK 211
L A ++T PD ++F S+ A L F E +
Sbjct: 1588 LMLAMAKPTYLAITQMSPDKP---------AMVFVPSRKQTRATARDLLAAAFTDDDEDR 1638
Query: 212 -----KQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTL 266
++ + L+E + EE L E + +GV Y+H L+ ++R+++ Y G +
Sbjct: 1639 FLHAEVEQMKPLLERINEEA-------LAEALSHGVGYYHEALSQSDKRIVKHLYDNGAI 1691
Query: 267 QIICCTSTLAAGVNLPAQRVIIRDS--YVGRDF----ISLNMYKQMVGRAGRTGLQESGE 320
Q++ + + +N A VI+ + + GR+ L+ M G+A R G
Sbjct: 1692 QVLVASRDVCWELNSTAHLVIVMGTQYFEGREHRYVDYPLSEVLHMFGKALRPSKDGRGR 1751
Query: 321 SI-MLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKTLIKH 379
+ ML + +++ + +N P+ SH+ L D+ + ++ + S +D
Sbjct: 1752 GVLMLPQVKREY--YKKFLNEA-LPVESHLH-NYLHDVFVTEISTKMIESGDDAINWTTF 1807
Query: 380 TLFYQ 384
T FY+
Sbjct: 1808 TYFYR 1812
>gi|148673107|gb|EDL05054.1| mCG119534 [Mus musculus]
Length = 2186
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 107/395 (27%), Positives = 183/395 (46%), Gaps = 47/395 (11%)
Query: 14 EEFKFYLEEYAGVK-----GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGL 68
+++K +EE G K G P + + K + + T EK + S + + ++ +
Sbjct: 1391 DDWKIRIEEKLGKKVIELTGDVTPDMKSIAKADLIVTTPEKWDGVSRSWQNRSYVQQVNI 1450
Query: 69 IVIDEFHMLNEPQRGPILECVVSKVLYL----KKSIQIFAMSATIGNINALSTFIE---- 120
++IDE H+L E +RGP+LE +VS+ ++ +K ++I +S + N L+ ++
Sbjct: 1451 LIIDEIHLLGE-ERGPVLEVIVSRTNFISSHTEKPVRIVGLSTALANARDLADWLNIKQM 1509
Query: 121 GITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNL 180
G+ N RP+ + V Q F G+ A S+ A+
Sbjct: 1510 GLF---NFRPSVRPVPLEVH---IQGFPGQHYCPRMA-----SMNKPAFQAIRSHSPAK- 1557
Query: 181 MVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLST----NLEE 236
VLIF SS+ AL L F T+E KQ + ++E D + T NL+
Sbjct: 1558 PVLIFVSSRRQTRLTALELI--AFLATEEDPKQ----WLNMDEQEMDNIIGTVRDSNLKL 1611
Query: 237 CILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS--YVG 294
+ +G+ HHA L +R+ +EE ++ +Q++ TSTLA GVN PA VII+ + Y G
Sbjct: 1612 TLAFGIGMHHAGLHERDRKTVEELFVNCKVQVLIATSTLAWGVNFPAHLVIIKGTEYYDG 1671
Query: 295 R-----DFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHM 349
+ DF ++ QM+GRAGR + G++++L ++ F P P+ S +
Sbjct: 1672 KTRRYVDFPITDVL-QMMGRAGRPQFDDQGKAVILVHDIKK--DFYKKFLYEPFPVESSL 1728
Query: 350 DPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQ 384
L D + +A +S +D I T F++
Sbjct: 1729 -LGVLSDHLNAEIAGGTITSKQDAMDYITWTYFFR 1762
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 97/373 (26%), Positives = 179/373 (47%), Gaps = 42/373 (11%)
Query: 33 TKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEI-GLIVIDEFHMLNEPQRGPILECVVS 91
+K ++ + + + T EK + + + + +I L+++DE H+L+E RGP+LE +V+
Sbjct: 572 SKSEILRTQMLVTTPEKWDVVTRKSVGDVALSQIVKLLILDEVHLLHE-DRGPVLESIVA 630
Query: 92 KVLYLKKS----IQIFAMSATIGNINALSTFIE-----GITYVENS-RPTKHSEYVTVDK 141
+ L +S I+I +SAT+ N ++TF+ G+ Y + RP
Sbjct: 631 RTLRQVESTQSMIRILGLSATLPNYLDVATFLHVNPYIGLFYFDGRFRPVP--------- 681
Query: 142 RVFQSFDG-KSLTEIYA-DNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRL 199
+ Q+F G KS ++ +N+D ++VL V+ V++F ++ A A+ L
Sbjct: 682 -LGQTFLGIKSTNKMQQLNNMDEVCY----ESVLKQVKAGHQVMVFVHARNATVRTAMSL 736
Query: 200 QFDRFPGTKE---YKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRL 256
+R + + + E + ALK+ + + + E G + HHA + +R L
Sbjct: 737 -IERAKNSGQISCFLPTEGPEYGHALKQVQKSR-NKQVRELFSDGFSIHHAGMLRQDRNL 794
Query: 257 IEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS--YVGR--DFISLNMYK--QMVGRA 310
+E + G ++++ CT+TLA GVNLPA V+I+ + Y + F+ L + Q+ GRA
Sbjct: 795 VENLFSNGHIKVLVCTATLAWGVNLPAHAVVIKGTQIYAAKRGSFVDLGILDVMQIFGRA 854
Query: 311 GRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAANLCSSL 370
GR + GE I++ T D L + PI S +L D + +A +++
Sbjct: 855 GRPQFDKFGEGIII--TTHDKLSHYLSLLTQQNPIESQF-LESLADNLNAEIALGTVTNV 911
Query: 371 EDVKTLIKHTLFY 383
E+ + +T Y
Sbjct: 912 EEAVRWMSYTYLY 924
>gi|429195498|ref|ZP_19187529.1| DEAD/DEAH box helicase [Streptomyces ipomoeae 91-03]
gi|428668800|gb|EKX67792.1| DEAD/DEAH box helicase [Streptomyces ipomoeae 91-03]
Length = 978
Score = 112 bits (280), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 84/312 (26%), Positives = 141/312 (45%), Gaps = 38/312 (12%)
Query: 37 LNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYL 96
+ +++ T EK + + + + E+G +V+DE H+L +P RG +LE ++++V
Sbjct: 307 IRAADVWVATTEKFEAICRAGSLRDALAEVGCLVVDEIHLLGDPARGAVLEALLTRVRKG 366
Query: 97 KKS--IQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTE 154
S +I +SAT+ N + ++ ++ RPT+ + + V
Sbjct: 367 SDSTGTRIIGLSATVANADEVAEWLGARLVRTAWRPTRLTWQLPVLP------------- 413
Query: 155 IYADNLDYSLTGS-GPDAVLHLVQ----GNLMVLIFCSSKIACSNLALRLQFDRFPGTKE 209
AD D++ + +A + + + VL+FC SK AL L DR T
Sbjct: 414 -LADEADWAARAAVRTEAAVRIAREVTADGGSVLVFCGSKRRVRATALALAADRGVATAG 472
Query: 210 YKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQII 269
+ E+ +E L C GV H+ D +R E+ + A I+
Sbjct: 473 VDADDAEE-VERL--------------CTKAGVRLHYRDWP--YKREAEQVFRARAADIL 515
Query: 270 CCTSTLAAGVNLPAQRVIIRDSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQ 329
TST+AAGVNLPA+ VI+ D+ +G D I ++M +QM GRAGR G E L
Sbjct: 516 VATSTVAAGVNLPARAVIVSDTSIGLDRIEVSMVQQMFGRAGRIGAGEREGWAFLLADPA 575
Query: 330 DFLRFSSMMNAG 341
+ + + + AG
Sbjct: 576 ERAHWQARLAAG 587
>gi|225703058|ref|NP_932124.2| activating signal cointegrator 1 complex subunit 3 [Mus musculus]
gi|385178609|sp|E9PZJ8.1|ASCC3_MOUSE RecName: Full=Activating signal cointegrator 1 complex subunit 3
Length = 2198
Score = 112 bits (280), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 107/395 (27%), Positives = 183/395 (46%), Gaps = 47/395 (11%)
Query: 14 EEFKFYLEEYAGVK-----GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGL 68
+++K +EE G K G P + + K + + T EK + S + + ++ +
Sbjct: 1391 DDWKIRIEEKLGKKVIELTGDVTPDMKSIAKADLIVTTPEKWDGVSRSWQNRSYVQQVNI 1450
Query: 69 IVIDEFHMLNEPQRGPILECVVSKVLYL----KKSIQIFAMSATIGNINALSTFIE---- 120
++IDE H+L E +RGP+LE +VS+ ++ +K ++I +S + N L+ ++
Sbjct: 1451 LIIDEIHLLGE-ERGPVLEVIVSRTNFISSHTEKPVRIVGLSTALANARDLADWLNIKQM 1509
Query: 121 GITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNL 180
G+ N RP+ + V Q F G+ A S+ A+
Sbjct: 1510 GLF---NFRPSVRPVPLEVH---IQGFPGQHYCPRMA-----SMNKPAFQAIRSHSPAK- 1557
Query: 181 MVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLST----NLEE 236
VLIF SS+ AL L F T+E KQ + ++E D + T NL+
Sbjct: 1558 PVLIFVSSRRQTRLTALELI--AFLATEEDPKQ----WLNMDEQEMDNIIGTVRDSNLKL 1611
Query: 237 CILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS--YVG 294
+ +G+ HHA L +R+ +EE ++ +Q++ TSTLA GVN PA VII+ + Y G
Sbjct: 1612 TLAFGIGMHHAGLHERDRKTVEELFVNCKVQVLIATSTLAWGVNFPAHLVIIKGTEYYDG 1671
Query: 295 R-----DFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHM 349
+ DF ++ QM+GRAGR + G++++L ++ F P P+ S +
Sbjct: 1672 KTRRYVDFPITDVL-QMMGRAGRPQFDDQGKAVILVHDIKK--DFYKKFLYEPFPVESSL 1728
Query: 350 DPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQ 384
L D + +A +S +D I T F++
Sbjct: 1729 -LGVLSDHLNAEIAGGTITSKQDAMDYITWTYFFR 1762
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 97/373 (26%), Positives = 179/373 (47%), Gaps = 42/373 (11%)
Query: 33 TKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEI-GLIVIDEFHMLNEPQRGPILECVVS 91
+K ++ + + + T EK + + + + +I L+++DE H+L+E RGP+LE +V+
Sbjct: 572 SKSEILRTQMLVTTPEKWDVVTRKSVGDVALSQIVKLLILDEVHLLHE-DRGPVLESIVA 630
Query: 92 KVLYLKKS----IQIFAMSATIGNINALSTFIE-----GITYVENS-RPTKHSEYVTVDK 141
+ L +S I+I +SAT+ N ++TF+ G+ Y + RP
Sbjct: 631 RTLRQVESTQSMIRILGLSATLPNYLDVATFLHVNPYIGLFYFDGRFRPVP--------- 681
Query: 142 RVFQSFDG-KSLTEIYA-DNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRL 199
+ Q+F G KS ++ +N+D ++VL V+ V++F ++ A A+ L
Sbjct: 682 -LGQTFLGIKSTNKMQQLNNMDEVCY----ESVLKQVKAGHQVMVFVHARNATVRTAMSL 736
Query: 200 QFDRFPGTKE---YKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRL 256
+R + + + E + ALK+ + + + E G + HHA + +R L
Sbjct: 737 -IERAKNSGQISCFLPTEGPEYGHALKQVQKSR-NKQVRELFSDGFSIHHAGMLRQDRNL 794
Query: 257 IEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS--YVGR--DFISLNMYK--QMVGRA 310
+E + G ++++ CT+TLA GVNLPA V+I+ + Y + F+ L + Q+ GRA
Sbjct: 795 VENLFSNGHIKVLVCTATLAWGVNLPAHAVVIKGTQIYAAKRGSFVDLGILDVMQIFGRA 854
Query: 311 GRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAANLCSSL 370
GR + GE I++ T D L + PI S +L D + +A +++
Sbjct: 855 GRPQFDKFGEGIII--TTHDKLSHYLSLLTQQNPIESQF-LESLADNLNAEIALGTVTNV 911
Query: 371 EDVKTLIKHTLFY 383
E+ + +T Y
Sbjct: 912 EEAVRWMSYTYLY 924
>gi|336466020|gb|EGO54185.1| hypothetical protein NEUTE1DRAFT_103645 [Neurospora tetrasperma
FGSC 2508]
gi|350287137|gb|EGZ68384.1| P-loop containing nucleoside triphosphate hydrolase protein
[Neurospora tetrasperma FGSC 2509]
Length = 1473
Score = 112 bits (280), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 92/318 (28%), Positives = 152/318 (47%), Gaps = 29/318 (9%)
Query: 35 RQLNKKSIYICTIEKGSKLIGSLIQENRIDE-IGLIVIDEFHMLNEPQRGPILECVVSKV 93
R++ + SI + T EK + R+ + + L +IDE H+L + RG LE VVS++
Sbjct: 275 RRVGEASIIVTTPEKWDSITRKWQDHRRLLQLVELFLIDEVHILKD-VRGATLEAVVSRM 333
Query: 94 LYLKKSIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSFDGKSLT 153
+ +++ A+SAT+ N + ++ ++ G + P Y V F+ +
Sbjct: 334 KTIGANVRFVALSATVPNSDDIAKWL-GRNHTTQQLPA----YREVFGEEFRPVKLQKFV 388
Query: 154 EIYADN-----LDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRLQFDRFPGTK 208
Y N D L G P +L LIFC ++ +C + A +L
Sbjct: 389 YGYECNGNDFIFDRFLDGKLP-TLLSKHNQRKPTLIFCFTRKSCESTATKL--------A 439
Query: 209 EYKKQEKE-DLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQ 267
EY E + + + + +S L+E + +GVA+HHA L +R +E+ +L G L
Sbjct: 440 EYASGLPETNSLWPIPTKRIPVVSRELQEIVRFGVAFHHAGLDVQDRVAVEQHFLNGELS 499
Query: 268 IICCTSTLAAGVNLPAQRVIIRDSYVGRDFISLNMYK-----QMVGRAGRTGLQESGESI 322
+ICCTSTLA GVNLP V+++ + D L Y QM+GRAGR S +I
Sbjct: 500 VICCTSTLAVGVNLPCHTVVMKGTVAFMD-DKLQEYSDLEIMQMLGRAGRPQFDTSATAI 558
Query: 323 MLCKTMQDFLRFSSMMNA 340
+L + + LR+ +M++
Sbjct: 559 ILTRAA-NKLRYENMVSG 575
>gi|296087631|emb|CBI34887.3| unnamed protein product [Vitis vinifera]
Length = 1270
Score = 112 bits (280), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 95/324 (29%), Positives = 158/324 (48%), Gaps = 53/324 (16%)
Query: 35 RQLNKKSIYICTIEKGSKLIGSLIQENRID---EIGLIVIDEFHMLNEPQRGPILECVVS 91
R + + I + T EK + I++ + +I L++IDE H+LN+P RG LE +VS
Sbjct: 128 RNIQEADIIVTTPEKFDAVTRYRIKDGGLSFFSDIALVLIDEVHLLNDP-RGAALEAIVS 186
Query: 92 KVLYLKKS----------IQIFAMSATIGNINALSTFI----EGIT-YVENSRPTKHSEY 136
++ L ++ ++ A+SATI NI L+ ++ +GI + E RP K
Sbjct: 187 RIKMLARNPEMKLSSLSHVRFLAVSATIPNIEDLAEWLMVPAQGIKRFGEEMRPVK---- 242
Query: 137 VTVDKRVFQSFDGKS--LTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSN 194
+ +VF K+ L E N + D ++ +G L+FCS++
Sbjct: 243 --LTTKVFGYTPAKNDFLFEKRLQNYIF-------DILMQYSRGK-SALVFCSTRKGAQE 292
Query: 195 LALRLQ---FDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTA 251
A R+ + + +E+E E L+E + ++ ILYGV YH+ L
Sbjct: 293 AAQRISQIAMNYGHSNPFIRSKEQE---ERLREASLSCSDKQMQSYILYGVGYHNGGLCP 349
Query: 252 GERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS---------YVGRDFISLNM 302
+R LIE +L G +QI+C T+TLA G+NLPA V+I+ + Y+ D +M
Sbjct: 350 KDRNLIEGLFLKGDIQILCTTNTLAHGINLPAHTVVIKSTQHFNKEKGLYMEYD---RSM 406
Query: 303 YKQMVGRAGRTGLQESGESIMLCK 326
QM GRAGR +++G +I++ +
Sbjct: 407 ILQMCGRAGRPPFEDTGMAIIMTR 430
>gi|71032923|ref|XP_766103.1| RNA helicase [Theileria parva strain Muguga]
gi|68353060|gb|EAN33820.1| RNA helicase, putative [Theileria parva]
Length = 1764
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 95/354 (26%), Positives = 165/354 (46%), Gaps = 60/354 (16%)
Query: 26 VKGQYPPTKRQLNKKSIYICTIEK------GSKLIGSLIQENRIDEIGLIVIDEFHMLNE 79
V G + K +L + I + T EK S + ++ + + LI+ DE H+LN+
Sbjct: 211 VTGDFQVPKSELEEIDILVTTPEKCDVVTRNSFSTATQSDDSFLTRVNLIIFDEIHLLND 270
Query: 80 PQRGPILECVVSKVLYLKKSIQI----FAMSATIGNINALSTFIEGITYVENSRPTKHSE 135
+RGP++E + ++ L + Q+ MSAT+ N ++ F+ P +H+
Sbjct: 271 -ERGPVIESIAARFFRLIEWTQVTRRVVGMSATLPNYEDIAAFLR--------VPPEHTY 321
Query: 136 YVTVDKR---VFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIAC 192
Y + R + Q F G +IY +N+ LT D ++ ++ ++F S+
Sbjct: 322 YFGREYRHVPLQQIFYGIKNDDIYKNNM---LTICF-DHIVETLESGKQCMVFVHSRNET 377
Query: 193 SNLALRLQFDRFPGTKEYKKQEKEDLIEA-----------LKEENDGKLSTNLEECILYG 241
A R+ + + EK DL + L N+ KL ++ Y
Sbjct: 378 FTTASRI-------VEMINRSEKSDLFQPDLAQVKRFSSQLMRRNNLKLLSD------YS 424
Query: 242 VAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGRDFISLN 301
++ HHA L+ +R L+EE + +G ++++ CTSTLA GVNLPA VII+ +++G + N
Sbjct: 425 ISIHHAGLSKSDRDLVEEMFKSGLVKVLVCTSTLAWGVNLPAHSVIIKGTFIGGVGVDRN 484
Query: 302 M----YKQMVGRAGRTGLQESGESIMLC--KTMQDFLRFSSMMNAGPEPISSHM 349
+ Q++GRAGR G+ I+L K + ++R M PI S +
Sbjct: 485 INNLELNQIMGRAGRPQFDVEGKGILLTDHKNLYSYVR----MQTERVPIESQL 534
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 95/342 (27%), Positives = 160/342 (46%), Gaps = 67/342 (19%)
Query: 1 MVHEKYQSLAKAAEEFKFYLE-----EYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIG 55
+ HE+++ K FK L+ + GQ + +L K I I T EK +
Sbjct: 1045 LAHERFKDWCKKLH-FKNILQLTGDTSSNNLDGQVHSERDELEKYDIVITTPEKWDGISR 1103
Query: 56 SLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKS----IQIFAMSATIGN 111
+ + ++GL++IDE H+L E RG I+E ++S+ + S ++ +S ++ N
Sbjct: 1104 HWRRRKLVTKVGLVIIDELHLLGE-SRGAIIESIISRQYTINHSTGVELRYICLSTSLSN 1162
Query: 112 INALSTFIEGITYVEN----SRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGS 167
+N ++ ++ I V N RP K + ++ DG S+ + Y ++ S+
Sbjct: 1163 LNEIAEWM-NIPNVYNFSPAVRPVKCNLFI----------DGFSI-KAYCPRMN-SMNKP 1209
Query: 168 GPDAVL-HLVQGNLMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEEN 226
D ++ H N VLIF SS + + +DL+ L+ N
Sbjct: 1210 CFDTIIRHDHSSN--VLIFVSS-------------------RRQTRMTAQDLVGLLQFYN 1248
Query: 227 DGKLSTN---------LEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAA 277
+TN L + G+ HHA L+ +R L+++ +L G L+++ TSTLA
Sbjct: 1249 ISFSNTNDTYFFDDEWLNTFVPNGIGIHHAGLSTKDRELVQDLFLNGKLKVLIATSTLAW 1308
Query: 278 GVNLPAQRVIIRDS--YVGR-----DFISLNMYKQMVGRAGR 312
GVNLPA+ VII+ + Y GR D+ + ++ QMVGRAGR
Sbjct: 1309 GVNLPAKIVIIKGTEFYDGRVKRYIDYSATDII-QMVGRAGR 1349
>gi|359488823|ref|XP_002273685.2| PREDICTED: uncharacterized protein LOC100245824 [Vitis vinifera]
Length = 1984
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 106/392 (27%), Positives = 185/392 (47%), Gaps = 55/392 (14%)
Query: 35 RQLNKKSIYICTIEKGSKLIGSLIQENRID---EIGLIVIDEFHMLNEPQRGPILECVVS 91
R + + I + T EK + I++ + +I L++IDE H+LN+P RG LE +VS
Sbjct: 876 RNIQEADIIVTTPEKFDAVTRYRIKDGGLSFFSDIALVLIDEVHLLNDP-RGAALEAIVS 934
Query: 92 KVLYLKKS----------IQIFAMSATIGNINALSTFI----EGIT-YVENSRPTKHSEY 136
++ L ++ ++ A+SATI NI L+ ++ +GI + E RP K
Sbjct: 935 RIKMLARNPEMKLSSLSHVRFLAVSATIPNIEDLAEWLMVPAQGIKRFGEEMRPVK---- 990
Query: 137 VTVDKRVFQSFDGKS--LTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSN 194
+ +VF K+ L E N + D ++ +G L+FCS++
Sbjct: 991 --LTTKVFGYTPAKNDFLFEKRLQNYIF-------DILMQYSRGK-SALVFCSTRKGAQE 1040
Query: 195 LALRLQ---FDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTA 251
A R+ + + +E+E E L+E + ++ ILYGV YH+ L
Sbjct: 1041 AAQRISQIAMNYGHSNPFIRSKEQE---ERLREASLSCSDKQMQSYILYGVGYHNGGLCP 1097
Query: 252 GERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS---------YVGRDFISLNM 302
+R LIE +L G +QI+C T+TLA G+NLPA V+I+ + Y+ D +M
Sbjct: 1098 KDRNLIEGLFLKGDIQILCTTNTLAHGINLPAHTVVIKSTQHFNKEKGLYMEYD---RSM 1154
Query: 303 YKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVV 362
QM GRAGR +++G +I++ + L + +++N G E + S + L E+V
Sbjct: 1155 ILQMCGRAGRPPFEDTGMAIIMTRRETVHL-YENLLN-GCELVESQLLSCVTEHLTAEIV 1212
Query: 363 AANLCSSLEDVKTLIKHTLFYQLKSPEDQQTF 394
+ ++ + L+ ++K ++ F
Sbjct: 1213 QLTVSDIARAIEWMKCSYLYVRMKKNPEKYAF 1244
>gi|407838499|gb|EKG00077.1| ATP-dependent RNA helicase, putative [Trypanosoma cruzi]
Length = 2238
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 103/409 (25%), Positives = 194/409 (47%), Gaps = 35/409 (8%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V E ++ +K E+ + E +G + QL+ + + T EK + ++
Sbjct: 480 LVQEVVRTFSKRLEQLGLTVMELSGDSNA---NQAQLSDAQLIVTTPEKWDVVTRKSVEL 536
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKK-----SIQIFAMSATIGNINAL 115
+ L+++DE H+L+ +RGP+LE +V++ + ++ I+I +SAT+ N +
Sbjct: 537 GVASLLKLLILDEVHLLHN-ERGPVLEAIVARTMLQQQLRGESDIRIVGLSATLPNYADV 595
Query: 116 STFIE-----GITYVENS-RPTKHSEYVTVDKRVFQSFDGKSLTEIYADNL-DYSLTGSG 168
++F++ G+ ++S RP + K+V + G + + D L +++G
Sbjct: 596 ASFLQVDRQRGLFVFDSSFRPIPLQQTFCAIKKVRGTNQGAVMNLVTYDKLLQAAMSGEQ 655
Query: 169 PDAVLHLVQGNLMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDG 228
+H + +++ +I R+ + PG+ E E ++ +
Sbjct: 656 SMVFVHSRKDTEYTVMYMIRRILEEK---RMHYFVRPGS------ESEQMLREAASDPSC 706
Query: 229 KLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVII 288
L +L++ + G A HHA ++ GER ++E + ++ + CTSTLA GVNLPA +VII
Sbjct: 707 PLRPSLQQMLPMGFAVHHAGMSRGEREVVERLFADRHVRALVCTSTLAWGVNLPANQVII 766
Query: 289 RDSYV------GRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGP 342
+ + V + +S QM GRAGR G S + + D + S++N
Sbjct: 767 KGTRVFNAAKGETELLSALDVLQMFGRAGRVGFGSSLGRAAVITSADDLHYYLSVLN-DQ 825
Query: 343 EPISSHMDPPTLVDLI-LEVVAANLCSSLEDVKTLIKHTLFYQL-KSPE 389
PI S M L+D+ EVV ++ S E V+ L + L+ ++ +SPE
Sbjct: 826 LPIESQMM-RRLIDMFNAEVVLGHVGSVAEGVRWLQRTYLYVRMQRSPE 873
>gi|239608038|gb|EEQ85025.1| DEAD/DEAH box DNA helicase [Ajellomyces dermatitidis ER-3]
Length = 1313
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 97/360 (26%), Positives = 166/360 (46%), Gaps = 50/360 (13%)
Query: 35 RQLNKKSIYICTIEKGSKLIGSLIQENRIDE-IGLIVIDEFHMLNEPQRGPILECVVSKV 93
R + +I I T EK + ++ + + L +IDE H+L E RG LE VVS++
Sbjct: 211 RNVQNANIVITTPEKWDSMTRKWKDHIKLMQLVKLFLIDEVHILKE-TRGATLEAVVSRM 269
Query: 94 LYLKKSIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSFDGKSLT 153
+ +++ A+SAT+ N + ++ PT S+++ + F G+
Sbjct: 270 KSVDSNVRFVALSATVPNSEDIGAWL-------GKDPT--SQHLPAHRERF----GEEFR 316
Query: 154 EIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFC---SSKIACSNLALRLQFDRFPGTKEY 210
+ L P+ V+ ++IFC +S IA S +L P + +
Sbjct: 317 PVKLQKL--------PE-VMEKHSKKKPIMIFCCTRNSAIATSKYLGKLWTSTNPPRRLW 367
Query: 211 KKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIIC 270
K +++ + L I GVA+HHA L A +R +E +L+G + +IC
Sbjct: 368 SGPTKPVVVQ----------NPELRATISTGVAFHHAGLDASDRHAVESGFLSGQINVIC 417
Query: 271 CTSTLAAGVNLPAQRVIIRDSYVGRD-----FISLNMYKQMVGRAGRTGLQESGESIMLC 325
CTSTLA GVNLP VII+++ +D + L M QM+GRAGR +S +++L
Sbjct: 418 CTSTLAVGVNLPCHLVIIKNTVSWQDNCCKEYPDLEMM-QMLGRAGRPQFDDSAVAVIL- 475
Query: 326 KTMQDFLRFSSMMNAGPEPISS--HMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFY 383
T ++ + + AG EP+ S H++ L+D + + + +E + T F+
Sbjct: 476 -TRKERVNHYEKLVAGTEPLESCLHLN---LIDHLNAEIGLGTVTGVESAVRWLTGTFFF 531
>gi|68469609|ref|XP_721056.1| hypothetical protein CaO19.8430 [Candida albicans SC5314]
gi|68469848|ref|XP_720934.1| hypothetical protein CaO19.810 [Candida albicans SC5314]
gi|46442828|gb|EAL02114.1| hypothetical protein CaO19.810 [Candida albicans SC5314]
gi|46442957|gb|EAL02242.1| hypothetical protein CaO19.8430 [Candida albicans SC5314]
Length = 1181
Score = 112 bits (279), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 125/465 (26%), Positives = 208/465 (44%), Gaps = 80/465 (17%)
Query: 36 QLNKKSIYICTIEKGSKLIGSLIQENRI-DEIGLIVIDEFHMLNEPQRGPILECVVSKVL 94
+ K +I + T EK + +R+ I ++++DE H+L E RG LE V++++
Sbjct: 180 NVRKSNIIVSTPEKWDMITRKWKDYSRLFGLIKILLVDEIHILKE-SRGSTLEVVMTRMK 238
Query: 95 YLKKSIQIFAMSATIGNINALSTFI----------EGITYVENSRPTKHSEYV-----TV 139
+ ++I A+SAT+ N +S +I E + + E RP K S+ V T
Sbjct: 239 RICIGLRILAISATVANAIDISKWIGLYDESTLPAETLCFGEKFRPVKLSKIVYGYKPTS 298
Query: 140 DKRV-FQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALR 198
D F F L E V++ VLIFCS++ +C N A
Sbjct: 299 DNDFQFDIFLNSKLIE-----------------VINRHSNGKSVLIFCSTRNSCQNTAKY 341
Query: 199 LQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIE 258
L F+ T + D+ LK+ + +T G+AYHHA LT G+R+ IE
Sbjct: 342 L-FNNLSETT------RTDI--KLKDRDAMNYATK-------GIAYHHAGLTFGDRKSIE 385
Query: 259 EAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS--YVGRDF--ISLNMYKQMVGRAGRTG 314
A+L L+I+C TSTLA G+NLPA VII+ + +V F S QMVGRAGR
Sbjct: 386 IAFLNSRLKILCSTSTLAVGINLPAYLVIIKGTKCWVESSFQEYSETDVLQMVGRAGRPQ 445
Query: 315 LQESGESIMLCKTMQDFLRFSSMMNAGPEPISS--HMDPPTLVDLILEVVAANLCSSLED 372
+ G ++++ T F + G E I S HM+ + + ++ + ++ED
Sbjct: 446 FERDGVAVIM--TSIKFKHRYERIIEGTEKIESSLHMN---FREHLAAEISVGVIKNIED 500
Query: 373 VKTLIKHTLFY------------QLKSPEDQQTFLETTLSEIVASLLASKGTMLTMNEAG 420
+K T Y Q+ D + L + + +L S+ +++ M+
Sbjct: 501 ALVWLKSTYLYVRFLANPGYYALQIPKSSDPEETLTSFCFQQCKTL--SQESLIIMDNQN 558
Query: 421 HLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNFCLLNSLHMLF 465
+ +T+ + V H V +L+H++ + +L++LF
Sbjct: 559 NCKITAYGYSMVM----HYVSFNTMKNLIHSEDQLSVHETLNLLF 599
>gi|322789902|gb|EFZ15034.1| hypothetical protein SINV_01618 [Solenopsis invicta]
Length = 1808
Score = 112 bits (279), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 122/480 (25%), Positives = 215/480 (44%), Gaps = 93/480 (19%)
Query: 28 GQYPPTKRQLNKKSIYICTIEK--------GSKLIGSLIQENRIDEIGLIVIDEFHMLNE 79
G + T+ Q+ + +CT EK G K SL++ LI+IDE H+L++
Sbjct: 240 GDHQLTREQIAATQVIVCTPEKWDIITRKGGEKTFTSLVR--------LIIIDEIHLLHD 291
Query: 80 PQRGPILECVVSKVLY----LKKSIQIFAMSATIGNINALSTFIE-----GITYVENS-R 129
+RGP+LE +V++ + ++ +++ +SAT+ N ++ F+ G+ Y +NS R
Sbjct: 292 -ERGPVLEALVARTIRNIETTQEDVRLVGLSATLPNYQDVAAFLRIKPETGLFYFDNSFR 350
Query: 130 PTK-HSEYVTV-DKRVFQSFDGKSLTEI-YADNLDYSLTGSGPDAVLHLVQGNLMVLIFC 186
P +Y+ V +K+ + F + + EI Y ++++ G VLIF
Sbjct: 351 PVALEQQYIGVTEKKALKRF--QVMNEIVYEKTMEHA--------------GRNQVLIFV 394
Query: 187 SSKIACSNLALRL-----------QFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLE 235
S+ A + QF R E +E L+ E + + L+
Sbjct: 395 HSRKETGKTARAIRDMCLEKDTLGQFLR----------EGSASMEVLRTEAEQVKNQELK 444
Query: 236 ECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYV-- 293
+ + YG A HHA +T +R L+E+ + +Q++ T+TLA GVNLPA VII+ + V
Sbjct: 445 DLLPYGFAIHHAGMTRVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQVYN 504
Query: 294 ---GRDFISLNMYK--QMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSH 348
GR ++ L QM+GRAGR GE I++ + + S++N PI S
Sbjct: 505 PEKGR-WVELGALDVLQMLGRAGRPQYDTKGEGILIT-NHSELQYYLSLLNQQ-LPIESQ 561
Query: 349 MDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFY--QLKSPE---------DQQTFLET 397
+ + D++ V ++ D T + +T Y L+ P Q LE
Sbjct: 562 L-ISKMSDMLNAEVVLGTIQNIRDAVTWLGYTYLYIRMLRCPNLYGISHDKLKQDPLLEL 620
Query: 398 TLSEIVASL---LASKGTMLTMNEAGHLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLN 454
++++ S L G + ++G+ T + + A +H+ + Y+ LL L+
Sbjct: 621 HRADLIHSAAIGLDRSGLIKYDRKSGNFQATELGRIASHYYCTHE-TMSTYNQLLKRTLS 679
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 83/335 (24%), Positives = 148/335 (44%), Gaps = 45/335 (13%)
Query: 37 LNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLY- 95
L K I I T +K L Q + I L ++DE ++ + GP+LE S+ Y
Sbjct: 1087 LAKGQIIITTADKWDVLSRRWKQRKNVQNIQLFIVDELQLIGG-EEGPVLEVACSRARYI 1145
Query: 96 ---LKKSIQIFAMSATIGNINALSTFIEG-----ITYVENSRPTKHSEYVTVDKRVFQSF 147
L K +I A+SA++ + + ++ + + RP +V
Sbjct: 1146 SSQLDKPTRIIALSASLADAKDAAQWLGAPAAATFNFHPSVRPVPLELHV---------- 1195
Query: 148 DGKSLTEIYADNLDYSLTGSGP--DAVL-HLVQGNLMVLIFCSSKIACSNLALRLQFDRF 204
G ++T N + P +A+L H ++V + + + + L L F
Sbjct: 1196 QGINVTH----NASRLAAMAKPVYNAILRHAAHKPVIVFVPTRRQARLTAIDL-LTFTAA 1250
Query: 205 PG-TKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLA 263
G + E+ D+ L D + L+E + GVAY H L+A +RRL+E+ + +
Sbjct: 1251 EGQPSRFFHAEEADIQPFL----DRMIDKTLKETLSQGVAYLHEGLSADDRRLVEQLFDS 1306
Query: 264 GTLQIICCTSTLAAGVNLPAQRVIIRDS--YVGR-----DFISLNMYKQMVGRAGRTGLQ 316
G +Q+ T L +++ + V++ D+ Y G+ D+ ++ QMV RA R
Sbjct: 1307 GAIQVAVATRDLCWSLSISSHLVVVMDTQCYNGKTHAYEDYPITDVL-QMVARANRPLED 1365
Query: 317 ESGESIMLCK-TMQDFLRFSSMMNAGPEPISSHMD 350
E + ++LC+ + +DF F +N P P+ SH+D
Sbjct: 1366 EDAKCVLLCQSSKKDF--FKKFLNE-PLPVESHLD 1397
>gi|378732460|gb|EHY58919.1| hypothetical protein HMPREF1120_06921 [Exophiala dermatitidis
NIH/UT8656]
Length = 2223
Score = 112 bits (279), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 108/410 (26%), Positives = 196/410 (47%), Gaps = 43/410 (10%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V E+ + K E + + E G + TK+Q+ + + T EK +
Sbjct: 608 LVQEQVGNFGKRLESYGIRVAELTGDRQL---TKQQIADTQVIVTTPEKWDVITRKATDL 664
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVS----KVLYLKKSIQIFAMSATIGNINALS 116
+ + LI+IDE H+L++ RGP+LE +VS K+ ++I +SAT+ N ++
Sbjct: 665 SYTRLVRLIIIDEIHLLHD-DRGPVLESIVSRTIRKIEQTGDPVRIVGLSATLPNYRDVA 723
Query: 117 TFI-----EGITYVENS-RPTK-HSEYVTV-DKRVFQSFDGKSLTEI-YADNLDYSLTGS 167
TF+ +G+ + + S RP E++ V +K+ + K++ ++ YA ++
Sbjct: 724 TFLRVDPEKGLFHFDGSYRPCPLRQEFIGVTEKKAIKML--KTMNDVCYAKVIE------ 775
Query: 168 GPDAVLHLVQGNLMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIE--ALKEE 225
H+ +LIF S+ + A ++ D+ + + + D L+EE
Sbjct: 776 ------HVGTNQQQMLIFVHSRKETAKTAKYIR-DKAVELETIGQIMRTDAASRTVLQEE 828
Query: 226 NDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQR 285
+ NL++ + YG HHA + +R +++ + G L+++ CT+TLA GVNLPA
Sbjct: 829 AEAVHDANLKDILPYGFGIHHAGMGVADRTSVQDLFADGYLRVLVCTATLAWGVNLPAHT 888
Query: 286 VIIRDSYV----GRDFISLNMYK--QMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMN 339
V+I+ + V ++ L+ QM+GRAGR GE I++ + + + S+MN
Sbjct: 889 VVIKGTQVYSPEKGSWVELSPQDVLQMLGRAGRPQFDSYGEGIIIT-SQSEIQYYLSLMN 947
Query: 340 AGPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQL-KSP 388
PI S + +L E+V N+ S E V+ L LF ++ +SP
Sbjct: 948 QQ-LPIESQLMGKLADNLNAEIVLGNIRSRDEGVEWLGYTYLFVRMIRSP 996
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 86/401 (21%), Positives = 172/401 (42%), Gaps = 52/401 (12%)
Query: 35 RQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVL 94
R L++ + + T + L + + + L + DE HML + G + E VV+++
Sbjct: 1482 RILDRSDLVLATPTQWDVLSRQWQRRKNVQNVELFIADELHMLGG-ENGAVYEVVVARMQ 1540
Query: 95 Y----LKKSIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEY--VTVDKRVFQSFD 148
Y L+ +++I +S + N + +I KH+ Y + V
Sbjct: 1541 YIHIQLENNMRIIGLSVPLSNARDVGEWIGA---------NKHTIYNFSPAARPVGLELH 1591
Query: 149 GKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRL--------Q 200
+S + + +L ++ AVL L + +IF ++ + AL L
Sbjct: 1592 IQSFSIPHFPSLMMAMARPAYQAVLQL-SPDKPAIIFVPNRKQVRSTALDLLQACIMDDD 1650
Query: 201 FDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEA 260
+RF T E+L L+ N+ L+ E + +G+ Y+H LT +++++
Sbjct: 1651 DERFLHTN------VEELAPFLERINERALA----ESLTHGIGYYHEALTTSDKKIVAHL 1700
Query: 261 YLAGTLQIICCTSTLAAGVNLPAQRVIIRDS--YVGRD--FISLNMYK--QMVGRAGRTG 314
+ G +Q++ + + + + A V+I + +VGR+ ++ + + QM GRA R G
Sbjct: 1701 FKIGAIQVMLASRDVCWELPVTAHLVVIMGTQYFVGREHRYVDYQISEVLQMFGRATRPG 1760
Query: 315 LQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAANLCSSLEDVK 374
+ G+ +++ ++ + +N PI SH+ L D + ++ +S +D
Sbjct: 1761 EDKLGKGVLMVPAVKREY-YKKFLNEA-LPIESHLQ-LWLHDAFVTEISTKTITSTQDAV 1817
Query: 375 TLIKHTLFYQ--LKSP------EDQQTFLETTLSEIVASLL 407
+T FY+ L +P + L T LSE+V + L
Sbjct: 1818 DWTTYTYFYRRLLANPSFYGLNDTSHEGLSTFLSELVENTL 1858
>gi|238881186|gb|EEQ44824.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 1987
Score = 112 bits (279), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 113/401 (28%), Positives = 199/401 (49%), Gaps = 55/401 (13%)
Query: 15 EFKFYLEEYAGV-----KGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLI 69
EF+ L GV G +K+Q+ + I + T EK I + + + + L+
Sbjct: 446 EFQRRLTSVYGVVVNELTGDSSLSKQQIAETQIIVTTPEKWD--IITRKDPSYVKLVKLM 503
Query: 70 VIDEFHMLNEPQRGPILECVVSKVLYLKKS----IQIFAMSATIGNINALSTFI----EG 121
+IDE H+L++ +RGP+LE +VS+ + ++ I+I +SAT+ N ++ FI EG
Sbjct: 504 IIDEIHLLHD-ERGPVLESLVSRAIRKSETTGSDIRIVGLSATLPNYADVAKFIRAKPEG 562
Query: 122 ITYVENS-RPTKHSE-YVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGN 179
+ Y + S RP + Y+ V ++ K++ I A + + D + +Q
Sbjct: 563 LFYFDASYRPCPLEQVYIGVKEQ-------KAIKRIAA------MNEACYDRMHQSLQDR 609
Query: 180 LMVLIFCSSK----IACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLE 235
++IF S+ L +L D E+E + E LK+E + + L+
Sbjct: 610 HQLIIFVHSRKETFTTAKYLMEKLDIDIV---------EQEGVKEILKQEGESMSNPKLK 660
Query: 236 ECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIR--DSYV 293
E I G HHA LT +R ++E+ + G L+++ T+TLA GVNLPA VII+ ++Y
Sbjct: 661 EVIPRGFGIHHAGLTKKDRGVVEDLFAQGYLRVLVSTATLAWGVNLPAHTVIIKGTETYS 720
Query: 294 GRD--FISLNMYK--QMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHM 349
++ L+ QM+GRAGR ++GE I++ T QD +++ + PI S +
Sbjct: 721 PESGAWVQLSPQDILQMLGRAGRPRYDKNGEGIII--TSQDEVQYYLAILNQQLPIESQL 778
Query: 350 DPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFY--QLKSP 388
+ ++ E+VA ++ + E ++ L +T F+ L+SP
Sbjct: 779 IHKLVDNINAEIVAGSITTIEEGIEWLT-YTYFFVRMLQSP 818
>gi|345561522|gb|EGX44611.1| hypothetical protein AOL_s00188g279 [Arthrobotrys oligospora ATCC
24927]
Length = 2219
Score = 112 bits (279), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 109/409 (26%), Positives = 195/409 (47%), Gaps = 43/409 (10%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V E+ + + E + + E G + TK Q+ + + T EK +
Sbjct: 606 LVQEQVGNFGQRLEHYGIKVAELTGDRQL---TKAQIADTQVIVTTPEKWDVITRKATDT 662
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKS----IQIFAMSATIGNINALS 116
+ + + LI+IDE H+L++ +RGP+LE +VS+ + ++ ++I +SAT+ N ++
Sbjct: 663 SYTNLVRLIIIDEIHLLHD-ERGPVLESIVSRTIRRQEQTLEPVRIVGLSATLPNYLDVA 721
Query: 117 TF-----IEGITYVENS-RPTK-HSEYVTV-DKRVFQSFDGKSLTEIYADNLDYSLTGSG 168
F + G+ + + S RP E+V V +K+ + + + E+ +
Sbjct: 722 AFLRIDTVSGLFHFDGSYRPCPLKQEFVGVTEKKPHKQL--QVMNEVTYNK--------- 770
Query: 169 PDAVLHLVQGNLMVLIFCSSKIACSNLALRLQFDRFP-GTKEYKKQEKEDLIEALKEEND 227
V+ V N M LIF S+ ++ GT + E E L+EE +
Sbjct: 771 ---VMEQVTKNQM-LIFVHSRADTGKTGKYIRDKAIELGTIGDIIRSDEASQEILREEAE 826
Query: 228 GKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVI 287
G + L++ + YG+ HHA + +R+++E+ + G L+++ CT+TLA GVNLPA VI
Sbjct: 827 GVENAELKDLMPYGIGIHHAGMRRLDRQIVEDLFTDGALRVLVCTATLAWGVNLPAHTVI 886
Query: 288 IRDSYV----GRDFISLNMYK--QMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAG 341
I+ + V D++ L+ QM+GRAGR GE I++ K+ + L++ +
Sbjct: 887 IKGTTVYSPEKGDWVELSPQDVLQMLGRAGRPQYDVYGEGIIITKSTE--LQYYLGLLNQ 944
Query: 342 PEPISSHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFY--QLKSP 388
PI S + +L EVV + S +D + +T Y L+SP
Sbjct: 945 QLPIESQFVSKLIDNLNAEVVLGTV-KSRDDAVEWLGYTYLYVRMLRSP 992
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 82/395 (20%), Positives = 170/395 (43%), Gaps = 48/395 (12%)
Query: 37 LNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYL 96
L + + + T + L + + + L + D+ HML G + E VVS++ Y+
Sbjct: 1478 LERGDLILATPGQWDVLSRQWQRRRNVQTVNLFIADDLHMLGG-NLGYLYEIVVSRMQYI 1536
Query: 97 -----KKSIQIFAMSATIGNINALSTFIEGITY-VENSRPTKHSEYVTVDKRVFQSFDGK 150
K +I A+S ++ N L +I ++ + N P D+ + + +
Sbjct: 1537 AIQLEKTDTRIVALSVSLANARDLGEWIGATSHTIYNFSP--------FDRPIPLAIHMQ 1588
Query: 151 SLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRLQFDRFPGTKE- 209
S T + ++ ++ A++ QG V ++ SS+ C N ++ L G E
Sbjct: 1589 SFTIPHHPSMMLAMVKPVYQAIVQHSQGERAV-VYVSSRKECRNSSMDLLTQCIAGDDED 1647
Query: 210 ---YKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTL 266
+ E E ++ L++ + L+ +L +G+ Y H L A +++++ + AG +
Sbjct: 1648 IFLHADPEDEGFLKMLEKVTEKTLAASLR----HGIGYFHEALNASDKQIVRYLFEAGAV 1703
Query: 267 QIICCTSTLAAGVNLPAQRVIIRDS--YVGRDF----ISLNMYKQMVGRAGRTGLQESGE 320
Q++ T + +++ A V++ + + GR+ L+ QM+G++ +
Sbjct: 1704 QVLFATRDVCWELDVTAPLVVVMGTQFFEGREHRYVDYPLSEVLQMLGQSTDKAV----- 1758
Query: 321 SIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHT 380
+M +D+ R +N PI SH+ L D + ++ + +S +D ++
Sbjct: 1759 -LMTPAAKKDYYR--KFVNEA-LPIESHLQ-SYLADAFVAEISTKMITSTQDAVDWTTYS 1813
Query: 381 LFYQ--LKSP------EDQQTFLETTLSEIVASLL 407
FY+ L +P + L T LSE+V + L
Sbjct: 1814 YFYRRLLANPSFYGLTDVSHEGLSTFLSELVENTL 1848
>gi|356525813|ref|XP_003531516.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
[Glycine max]
Length = 2183
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 128/476 (26%), Positives = 221/476 (46%), Gaps = 65/476 (13%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V E +L+ +E+ + E +G + T++Q+ + I + T EK +
Sbjct: 583 LVAEVVGNLSNRLQEYDVKVRELSGDQSL---TRQQIEETQIIVTTPEKWDIITRKSGDR 639
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLY----LKKSIQIFAMSATIGNINALS 116
+ L++IDE H+L++ RGP+LE +V++ + K I++ +SAT+ N ++
Sbjct: 640 TYTQLVKLLIIDEIHLLHD-NRGPVLESIVARTVRQIETTKDYIRLVGLSATLPNYEDVA 698
Query: 117 TFI-----EGITYVENS-RPTKHSE-YVTVD-KRVFQSFDGKSLTEIYADNLDYSLTGSG 168
F+ +G+ Y +NS RP S+ YV + K+ Q F + + +I + +
Sbjct: 699 LFLRVDLKKGLFYFDNSYRPVPLSQQYVGITVKKPLQRF--QLMNDICYEKV-------- 748
Query: 169 PDAVLHLVQGNLMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLI--EALKEEN 226
V G VLIF S+ + A ++ D + KED E L
Sbjct: 749 -----MAVAGKHQVLIFVHSRKETAKTARAIR-DAALANDTLGRFLKEDSASREILHTHT 802
Query: 227 DGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRV 286
D S +L++ + YG A HHA +T +R+L+E+ + G +Q++ T+TLA GVNLPA V
Sbjct: 803 DLVKSNDLKDLLPYGFAIHHAGMTRTDRQLVEDLFADGHVQVLVSTATLAWGVNLPAHTV 862
Query: 287 IIRDSYV-------GRDFISLNMYKQMVGRAGRTGLQESGESIMLC--KTMQDFLRFSSM 337
II+ + + + L++ QM+GRAGR GE I++ +Q +L S+
Sbjct: 863 IIKGTQIYNPEKGAWTELSPLDVM-QMLGRAGRPQYDSYGEGIIVTGHSELQYYL---SL 918
Query: 338 MNAGPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFY--QLKSPE------ 389
MN PI S L E+V + ++ E I +T Y L++P
Sbjct: 919 MNQQ-LPIESQFVSKLADQLNAEIVLGTVQNAREAC-NWIGYTYLYVRMLRNPSLYGIAP 976
Query: 390 DQQTFLETTLSEIVASLLASKGTMLTMN-------EAGHLSLTSIAKAAVQAGLSH 438
D T + TL E A L+ + T+L N ++G+ +T + + A ++H
Sbjct: 977 DVLT-RDITLEERRADLIHTAATILDRNNLVKYDRKSGYFQVTDLGRIASYYYITH 1031
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 92/401 (22%), Positives = 167/401 (41%), Gaps = 47/401 (11%)
Query: 10 AKAAEEFKFYLEEYAG--------VKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQEN 61
A A E ++ + ++ G + G+ + L K I I T EK L Q
Sbjct: 1421 ALAKERYRDWERKFGGGLKLRVVELTGETATDLKLLEKGQIIISTPEKWDALSRRWKQRK 1480
Query: 62 RIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQ----IFAMSATIGNINALST 117
+ ++ L +IDE H++ Q GPILE VVS++ Y+ ++ I A+S ++ N L
Sbjct: 1481 HVQQVSLFIIDELHLIGG-QGGPILEVVVSRMRYIASQVENKSRIVALSTSLANAKDLGE 1539
Query: 118 FIEGIT-----YVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAV 172
+I + + RP ++ G +T A ++T A+
Sbjct: 1540 WIGATSHGLFNFPPGVRPVPLEIHIQ----------GIDITNFEARM--QAMTKPTYTAI 1587
Query: 173 LHLVQGNLMVLIFCSSK--IACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKL 230
+ + LIF ++ + + + + G K + + E+L L + D L
Sbjct: 1588 VQHAKNGKPALIFVPTRKHVRLTAVDMITYSGADSGEKPFLLRSAEELEPFLDKITDEML 1647
Query: 231 STNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRD 290
L E GV Y H L + + ++ + + AG +Q+ S++ GV L A V++
Sbjct: 1648 KVTLRE----GVGYLHEGLNSLDHDIVTQLFEAGWIQVCVLNSSMCWGVTLLAHLVVVMG 1703
Query: 291 S--YVGR-----DFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPE 343
+ Y GR D+ ++ QM+G A R + SG+ ++LC + + A
Sbjct: 1704 TQYYDGRENAQTDYPVTDLL-QMMGHASRPLVDNSGKCVILCHAPRKEYYKKFLYEAF-- 1760
Query: 344 PISSHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQ 384
P+ SH+ +L E+VA + + +D + T Y+
Sbjct: 1761 PVESHLHHFLHDNLNAEIVAG-IIENKQDAVDYLTWTFMYR 1800
>gi|367008338|ref|XP_003678669.1| hypothetical protein TDEL_0A01260 [Torulaspora delbrueckii]
gi|359746326|emb|CCE89458.1| hypothetical protein TDEL_0A01260 [Torulaspora delbrueckii]
Length = 2184
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 114/410 (27%), Positives = 191/410 (46%), Gaps = 43/410 (10%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V E+ + + +EE G +K Q+++ I + T EK +
Sbjct: 596 LVQEQVREFQRRLAYLDIKVEELTGDSNL---SKYQISQTQILVSTPEKWDVITRKAADT 652
Query: 61 NR-IDEIGLIVIDEFHMLNEPQRGPILECVVSKVL---YLKKSIQIFAMSATIGNINALS 116
+ I + LI+IDE H+L++ QRGP++E +V++ L + +I +SAT+ N ++
Sbjct: 653 SSFIRLVRLIIIDEVHLLHD-QRGPVIESIVARSLQSEVIPSRPRIVGLSATLPNYEDVA 711
Query: 117 TFIE----GITYVENS-RPTKHS-EYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPD 170
F++ G+ Y +++ RP S E+ V ++ S+ I A N + D
Sbjct: 712 KFLQVPPKGLFYFDSAYRPCPLSQEFCGVTEK-------NSVKRIQAAN------EACYD 758
Query: 171 AVLHLVQGNLMVLIFCSSKIACSNLALRLQFDRF--PGTKEYKKQEKEDLIEALKEENDG 228
L V N V+IF S+ + LA L ++F G E ++ + L E +
Sbjct: 759 KTLQSVTDNHQVIIFVHSRKETARLAKYL-VEKFNESGNSESLRKSDAGSKQVLSTEAEN 817
Query: 229 KLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVII 288
+L + YG+ HHA L+ +R L E+ + G LQ++ T+TLA GVNLPA VII
Sbjct: 818 IQDPHLRLVLKYGIGLHHAGLSRSDRSLAEDLFADGVLQVLVSTATLAWGVNLPAHTVII 877
Query: 289 RDSYV------GRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGP 342
+ + V D +S QM+GRAGR GE I++ D + +++N
Sbjct: 878 KGTDVYSPEKSTWDKLSPQDLLQMLGRAGRPRYDTHGEGIIIT-NQTDVQYYLAVLNQQL 936
Query: 343 EPISSHMDPPTLVDLILEVVAANL-CSSLEDVKTLIKHTLFY--QLKSPE 389
PI S + +L E+V+ N+ C +D + +T Y L SP+
Sbjct: 937 -PIESQFISMLMDNLNAEIVSGNIKCR--QDAVNWLSYTYLYVRMLVSPQ 983
>gi|353240603|emb|CCA72464.1| probable ATP dependent RNA helicase [Piriformospora indica DSM 11827]
Length = 2180
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 119/468 (25%), Positives = 213/468 (45%), Gaps = 68/468 (14%)
Query: 13 AEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVID 72
++ K Y + + G TK+Q+ + I + T EK + + + + LI+ID
Sbjct: 570 SDRLKIYGVKVGELTGDSQMTKQQIAETQIIVTTPEKWDVITRKSTDMSYTNLVRLIIID 629
Query: 73 EFHMLNEPQRGPILECVVSKVL----YLKKSIQIFAMSATIGNINALSTFI-----EGIT 123
E H+L++ +RGP+LE ++++ + + +++ A+SAT+ N ++ F+ +G+
Sbjct: 630 EIHLLHD-ERGPVLEAIIARTIRRMEQTRDYVRLVALSATLPNYQDVAKFLRVDSSKGLF 688
Query: 124 YVE---NSRPTKHSEYVTVDKRVFQSFDGKSLTEI-YADNLDYSLTGSGPDAVLHLVQGN 179
+ + SRP + +K+ + + + + E+ Y LD + G
Sbjct: 689 FFDVTYRSRPLRQQFVGITEKKAIKRY--QVMNEVCYEKVLDQA--------------GK 732
Query: 180 LMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLI-------EALKEENDGKLST 232
L+F S+ + A RF +K+ E + E L E
Sbjct: 733 NQSLVFVHSRKETAKTA------RFIRDMAVEKETIEHFVKPDSGTREILLSEVSSITDP 786
Query: 233 NLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSY 292
NL++ + +G A HHA L + +R L+EE + G LQ++ T+TLA GVNLPA VII+ +
Sbjct: 787 NLKDLLPFGFAIHHAGLNSTDRGLVEELFKDGHLQVLVSTATLAWGVNLPAHCVIIKGTQ 846
Query: 293 V-----GRDFISLNMYK--QMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPI 345
+ GR ++ L+ QM+GRAGR E GE I++ + + S+MN PI
Sbjct: 847 IYNPEKGR-WVELSSQDVLQMLGRAGRPQYDEYGEGIIIT-NHSELQYYLSLMNQQ-LPI 903
Query: 346 SSHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFY--QLKSPE---------DQQTF 394
S + +L E+V + + E V+ I +T Y LK P D
Sbjct: 904 ESQLVAKLADNLNAEIVLGTIRNRDEAVQ-WIGYTYLYVRMLKDPALYSVNSDYLDDDPH 962
Query: 395 LETTLSEIV--ASLLASKGTMLTMNE-AGHLSLTSIAKAAVQAGLSHD 439
LE ++I A++L K ++ + +G T + + A ++H+
Sbjct: 963 LEQKRADIAHSAAVLLEKCNLIKYDRSSGRFQSTELGRIASHYYVTHN 1010
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 90/410 (21%), Positives = 168/410 (40%), Gaps = 65/410 (15%)
Query: 35 RQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVL 94
RQL + +CT + + + ++ + L++ DE H++N GP+ E V+S+
Sbjct: 1440 RQLQIGHVIVCTPTQWDMISRRWKKRKQVQNLALLICDEAHLVNA-DIGPVYEVVISRTR 1498
Query: 95 YLKKSIQ----IFAMSATIGNINALSTFIEGIT-----YVENSRPTK---HSEYVTVDKR 142
Y+ K + I A+SA++ N ++ + + ++RP H + ++
Sbjct: 1499 YVSKQTEVETRIVALSASLANARDFGEWMGAPSRAIYNFPPSARPLDLDIHLQSFSIPH- 1557
Query: 143 VFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRLQFD 202
F S Y DYS T Q L + +A N L L +D
Sbjct: 1558 -FPSLMIAMSKPAYLAIKDYSPTKPVIIFTPSRKQARLTASDILTHCLADENQDLFLNYD 1616
Query: 203 RFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYL 262
E LKE + +L E + +G+ ++H L +++++E +
Sbjct: 1617 P----------------ERLKEHLEHVSDQSLVESLSHGIGFYHEALDKQDKKIVERLFE 1660
Query: 263 AGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGRDFISLNMYK----------QMVGRAGR 312
AG +Q++ + A + L + VII +G + ++ QM+G A R
Sbjct: 1661 AGAIQLLVASRETAWSLPLSSYMVII----MGVQYFEGKEHRYVDYPVADVLQMMGHACR 1716
Query: 313 TGLQESGESIMLC-KTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAANLCSSLE 371
+ + +++C +T +DF R +N G PI SH+ L D L +A + +
Sbjct: 1717 PAVDDRSRCVLMCQQTRKDFYR--KFLNEG-LPIESHLPTHFLHDFFLAEIAEETIENKQ 1773
Query: 372 DVKTLIKHTLFYQ--LKSP--------------EDQQTFLETTLSEIVAS 405
D ++ T FY+ ++P + +ETTLS++VA+
Sbjct: 1774 DAIDILTWTYFYRRLTQNPNYYNLNNISHQHLSDHLSELVETTLSDLVAA 1823
>gi|119195611|ref|XP_001248409.1| hypothetical protein CIMG_02180 [Coccidioides immitis RS]
Length = 2926
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 123/475 (25%), Positives = 221/475 (46%), Gaps = 54/475 (11%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V E+ + K E + + E G + TK+Q+ + + + T EK +
Sbjct: 605 LVQEQVGNFGKRLEPYGIKVSELTGDRQL---TKQQIAETQVIVTTPEKWDIVTRKATDT 661
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKS----IQIFAMSATIGNINALS 116
+ + L++IDE H+L++ RGP+LE +VS+ + + +++ +SAT+ N +
Sbjct: 662 SYTRLVRLVIIDEIHLLHD-DRGPVLESIVSRTIRRTEQTGDPVRLVGLSATLPNYRDVG 720
Query: 117 TF-----IEGITYVENS-RPTK-HSEYVTV-DKRVFQSFDGKSLTEIYADNLDYSLTGSG 168
+F I G+ + + S RP E++ V +K+ + K++ ++ +
Sbjct: 721 SFLRVDPISGLFHFDGSYRPCPLKQEFIGVTEKKAIKQL--KTMNDVCYNK--------- 769
Query: 169 PDAVLHLVQGNL-MVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEA--LKEE 225
VL V N +LIF S+ + A R D+ + + + D L EE
Sbjct: 770 ---VLEQVGTNKNQMLIFVHSRKDTAKTA-RYIRDKAVEMETIGQILRSDAASRAILAEE 825
Query: 226 NDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQR 285
+ +L++ + YG HHA ++ +R +E+ + G+LQ++ CT+TLA GVNLPA
Sbjct: 826 AESVNDPSLKDLMPYGFGIHHAGMSKVDRTSVEDLFADGSLQVLVCTATLAWGVNLPAHT 885
Query: 286 VIIRDSYV----GRDFISLNMYK--QMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMN 339
VII+ + V ++ L+ QM+GRAGR GE I++ T + + S++N
Sbjct: 886 VIIKGTQVYSPEKGSWVELSPQDVLQMLGRAGRPQYDSFGEGIIIT-TQGELQYYLSLLN 944
Query: 340 AGPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQ-LKSPE--------D 390
PI S + +L EVV N+ S E V+ L LF + L+SP +
Sbjct: 945 QQ-LPIESQLMSKLADNLNAEVVLGNVRSRDEGVEWLGYTYLFVRMLRSPGLYSVGADYE 1003
Query: 391 QQTFLETTLSEIV---ASLLASKGTMLTMNEAGHLSLTSIAKAAVQAGLSHDVCL 442
LE ++V A++L + G + ++G L T + + A ++H+ L
Sbjct: 1004 GDAALEQRRVDLVHSAATVLGNAGLVKYDKQSGKLQSTELGRIASHYYITHNSML 1058
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 76/353 (21%), Positives = 159/353 (45%), Gaps = 45/353 (12%)
Query: 53 LIGSLIQENR-IDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYL----KKSIQIFAMSA 107
++ L Q + + + L++ DE HML Q G + E VVS++ Y+ + +++I +S
Sbjct: 1496 VVSRLWQRRKNVQAVELLIADELHMLGG-QGGYVYEVVVSRMHYIALQTESNLRIVGLSV 1554
Query: 108 TIGNINALSTFIEGITY-VENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTG 166
+ N L ++ + + N P H+ V ++ + +S T + +L ++
Sbjct: 1555 PLSNARDLGEWLGAKKHTIYNFSP--HARPVPLELHL------QSFTIPHFPSLMLAMAR 1606
Query: 167 SGPDAVLHLVQGNLMVLIFCSSKIACSNLALRL--------QFDRFPGTKEYKKQEKEDL 218
++L L L+F ++ + AL L DRF T+ ++ L
Sbjct: 1607 PAYSSILQLSPSK-PALVFVPTRKQTRSTALDLVAACIADDAEDRFLHTE---IEQIAPL 1662
Query: 219 IEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAG 278
+E + E L E + +G+ Y+H L+ ++R++ + G +Q++ + +
Sbjct: 1663 LERIDERA-------LAESLSHGIGYYHEALSKSDKRIVSHLFNIGAIQVMLASRDVCWE 1715
Query: 279 VNLPAQRVIIRDS--YVGRD--FISLNMYK--QMVGRAGRTGLQESGESIMLCKTM-QDF 331
+ A VII ++ + GR+ +I + + QM GRA R SG+ +++ + +D+
Sbjct: 1716 IEFTAHLVIIMNTQFFDGREHRYIDYPVSEILQMFGRASRPLDDRSGKGVLMVPAVRRDY 1775
Query: 332 LRFSSMMNAGPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQ 384
+ +N P+ SH+ L D + ++ +S +D + +T FY+
Sbjct: 1776 --YKKFLNEA-LPMESHLQ-IYLHDAFVTEISTKTITSTQDAVDWMTYTYFYR 1824
>gi|361128461|gb|EHL00396.1| putative ATP-dependent DNA helicase MER3 [Glarea lozoyensis 74030]
Length = 486
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/304 (28%), Positives = 147/304 (48%), Gaps = 30/304 (9%)
Query: 36 QLNKKSIYICTIEKGSKLIGSLIQENR-IDEIGLIVIDEFHMLNEPQRGPILECVVSKVL 94
++ SI + T EK + ++ + + L +IDE H+L E RG LE VVS++
Sbjct: 3 RVRNASIIVTTPEKWDSITRKWADHHKLVQMVKLFLIDEVHILKEV-RGATLEVVVSRMK 61
Query: 95 YLKKSIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEY------VTVDKRVFQSFD 148
++ A+SATI N ++ ++ G + P + V + K V+ +D
Sbjct: 62 SRGADVRFVALSATIPNSEDVAVWL-GRDHCTQQLPASRETFDETFRPVKLQKHVY-GYD 119
Query: 149 GKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRLQFDRFPGTK 208
GK + LD L G ++ ++IFC ++ +C + AL+L +
Sbjct: 120 GKMNDFAFEKLLDGKLPG-----LIRKHTRKKPIMIFCFTRKSCESTALKL-------AE 167
Query: 209 EYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQI 268
+ Q + + S L++ + GVA+HHA L A +R++IE ++L G + +
Sbjct: 168 WWTGQVAAERAWPSPSQRVVVGSKELQDIVTCGVAFHHAGLDAQDRQVIETSFLKGNISV 227
Query: 269 ICCTSTLAAGVNLPAQRVIIRDSYV-GRDFISLNMYK-----QMVGRAGRTGLQESGESI 322
ICCTSTLA GVNLP VI++ + G + L Y QM+GRAGR +++ +I
Sbjct: 228 ICCTSTLAVGVNLPCHLVILKGTVTFGNNL--LTEYSDLEVMQMLGRAGRPQFEDTAVAI 285
Query: 323 MLCK 326
++ K
Sbjct: 286 IMTK 289
>gi|348670930|gb|EGZ10751.1| hypothetical protein PHYSODRAFT_563628 [Phytophthora sojae]
Length = 2145
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 107/394 (27%), Positives = 181/394 (45%), Gaps = 67/394 (17%)
Query: 37 LNKKSIYICTIEKGSKLI-GSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLY 95
LNK I + T EK L S + + ++ L+++DE H++ E RG +LE ++S++
Sbjct: 1348 LNKADIVVTTPEKWDLLTRSSSVGRALMSQMALVIVDEVHLVGEAPRGAVLEVLISRLRR 1407
Query: 96 LKKS---IQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEY--------VTVDKRVF 144
K+S I++ +S + N + ++ GIT + P Y V +D +
Sbjct: 1408 FKRSGPPIRVIGLSTALANAGDVGQWLGGITSSHANNPDGGQVYNFRASVRPVPMDVHI- 1466
Query: 145 QSFDGKS-LTEIYADNLD--YSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRL-Q 200
Q F + + + A N ++ PD VLIF SSK AL L Q
Sbjct: 1467 QGFPERHYVARMAAMNKPTFMAIKSHSPDKP---------VLIFVSSKAQTKLTALDLIQ 1517
Query: 201 F-----DRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERR 255
F + G+K + K + E +++++ + N + L+ + +G+ HHA L +R
Sbjct: 1518 FCVASDESGDGSKCFLKMD-EAVMDSICQSNQ-IVDETLKHTLSFGIGLHHAGLARRDRE 1575
Query: 256 LIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGRDFISLNMYK--------QMV 307
L+E+ Y +Q++ TSTLA GVNLPA V+I+ G ++ Y+ QM+
Sbjct: 1576 LVEKLYKDRLIQVVISTSTLAWGVNLPAHLVVIK----GTEYFQNGRYRSYPLSDLLQMI 1631
Query: 308 GRAGRTGLQESGESIMLC----KTMQDFLRFSSMM-------NAGPEPISSHMDPPTLVD 356
GRAGR L + G + +L K M + + NA P +++H++
Sbjct: 1632 GRAGRPLLDDKGVACVLVEESKKNMTQRFLYEPLAVESCLGGNAAPHILANHLNAE---- 1687
Query: 357 LILEVVAANLCSSLEDVKTLIKHTLFYQ--LKSP 388
+AA L S +DV + +L +Q LK+P
Sbjct: 1688 -----IAAGLIHSTKDVMDYLSWSLLFQRVLKNP 1716
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 111/224 (49%), Gaps = 17/224 (7%)
Query: 173 LHLVQGNLMVLIFCSSKIAC-----SNLALRLQFDRFPGTKE-YKKQEKEDLIEALKEEN 226
L VQ N V++F S+ S + L + PGT E + + L+E
Sbjct: 573 LKQVQHNEQVMVFVHSRKETAATMHSIVELARGNEEEPGTLEAFLPPPDLQMPINLQERV 632
Query: 227 DGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRV 286
+ L+E + YG+ HHA + +R L E+ + G ++++CCT+TLA GVNLPA V
Sbjct: 633 QKSRNKELKELLGYGMGIHHAGMLRSDRNLTEQLFEMGYIRVLCCTATLAWGVNLPAHSV 692
Query: 287 IIRDSYV------GRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFL-RFSSMMN 339
II+ + V G +S+ Q+ GRAGR SG+++++ T QD L + ++
Sbjct: 693 IIKGTQVYNADKGGMTQLSMLDVMQIFGRAGRPQYDTSGDAVLV--TTQDQLPHYLRLLT 750
Query: 340 AGPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFY 383
G P+ S + L E+V+ + ++LE+ T + +T Y
Sbjct: 751 TGI-PMESALIKALPDHLNAEIVSGTV-TNLEEACTWLSYTYLY 792
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 57/92 (61%), Gaps = 6/92 (6%)
Query: 33 TKRQLNKKSIYICTIEKGSKLI-GSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVS 91
TK+++ + + + T EK + S Q++ + ++ L++IDE H+L + +RGP++E +V+
Sbjct: 384 TKKEIEETHVIVTTPEKWDVITRKSGTQQSLLSQVKLLIIDEVHLLAD-ERGPVIETIVA 442
Query: 92 KVLYLKKS----IQIFAMSATIGNINALSTFI 119
+ L +S I+I +SAT+ N +++F+
Sbjct: 443 RTLRRVESTQSMIRIVGLSATLPNYVDVASFL 474
>gi|68481124|ref|XP_715477.1| potential spliceosomal U5 snRNP RNA helicase [Candida albicans
SC5314]
gi|68481265|ref|XP_715407.1| potential spliceosomal U5 snRNP RNA helicase [Candida albicans
SC5314]
gi|46437029|gb|EAK96382.1| potential spliceosomal U5 snRNP RNA helicase [Candida albicans
SC5314]
gi|46437101|gb|EAK96453.1| potential spliceosomal U5 snRNP RNA helicase [Candida albicans
SC5314]
Length = 1987
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 113/401 (28%), Positives = 199/401 (49%), Gaps = 55/401 (13%)
Query: 15 EFKFYLEEYAGV-----KGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLI 69
EF+ L GV G +K+Q+ + I + T EK I + + + + L+
Sbjct: 446 EFQRRLTSVYGVVVNELTGDSSLSKQQIAETQIIVTTPEKWD--IITRKDPSYVKLVKLM 503
Query: 70 VIDEFHMLNEPQRGPILECVVSKVLYLKKS----IQIFAMSATIGNINALSTFI----EG 121
+IDE H+L++ +RGP+LE +VS+ + ++ I+I +SAT+ N ++ FI EG
Sbjct: 504 IIDEIHLLHD-ERGPVLESLVSRAIRKSETTGSDIRIVGLSATLPNYADVAKFIRAKPEG 562
Query: 122 ITYVENS-RPTKHSE-YVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGN 179
+ Y + S RP + Y+ V ++ K++ I A + + D + +Q
Sbjct: 563 LFYFDASYRPCPLEQVYIGVKEQ-------KAIKRIAA------MNEACYDRMHQSLQDR 609
Query: 180 LMVLIFCSSK----IACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLE 235
++IF S+ L +L D E+E + E LK+E + + L+
Sbjct: 610 HQLIIFVHSRKETFTTAKYLMEKLDIDIV---------EQEGVKEILKQEGESMSNPKLK 660
Query: 236 ECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIR--DSYV 293
E I G HHA LT +R ++E+ + G L+++ T+TLA GVNLPA VII+ ++Y
Sbjct: 661 EVIPRGFGIHHAGLTKKDRGVVEDLFAQGYLRVLVSTATLAWGVNLPAHTVIIKGTETYS 720
Query: 294 GRD--FISLNMYK--QMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHM 349
++ L+ QM+GRAGR ++GE I++ T QD +++ + PI S +
Sbjct: 721 PESGAWVQLSPQDILQMLGRAGRPRYDKNGEGIII--TSQDEVQYYLAILNQQLPIESQL 778
Query: 350 DPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFY--QLKSP 388
+ ++ E+VA ++ + E ++ L +T F+ L+SP
Sbjct: 779 IHKLVDNINAEIVAGSITTIEEGIEWLT-YTYFFVRMLQSP 818
>gi|327305177|ref|XP_003237280.1| pre-mRNA splicing helicase [Trichophyton rubrum CBS 118892]
gi|326460278|gb|EGD85731.1| pre-mRNA splicing helicase [Trichophyton rubrum CBS 118892]
Length = 2211
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 122/480 (25%), Positives = 222/480 (46%), Gaps = 64/480 (13%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V E+ + K + + + E G + TK+Q+ + + T EK +
Sbjct: 601 LVQEQVGNFGKRLQHYGIKVSELTGDRQL---TKQQIADTQLIVTTPEKWDIITRKATDT 657
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVL----YLKKSIQIFAMSATIGNINALS 116
+ + L++IDE H+L++ +RGP+LE +VS+ + + +++ +SAT+ N +
Sbjct: 658 SYTRLVRLVIIDEIHLLHD-ERGPVLESIVSRTIRKTEQTGEPVRLVGLSATLPNYRDVG 716
Query: 117 TF-----IEGITYVENS-RPTK-HSEYVTV-DKRVFQSFDGKSLTEI-YADNLDYSLTGS 167
+F I G+ + + + RP E++ V DK+ + K++ +I Y LD G+
Sbjct: 717 SFLRVDPIHGLFHFDGTFRPCPLKQEFIGVTDKKAIKQL--KTMNDICYTKVLDQ--VGA 772
Query: 168 GPDAVLHLVQGNLMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEA------ 221
+ +LIF S+ L+ R+ K + + ++ +
Sbjct: 773 NKN----------QMLIFVHSRKET------LKTARYIRDKAVEMETIGQILRSDAASRA 816
Query: 222 -LKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVN 280
L EE D L++ + YG HHA ++ +R +E+ + G+LQ++ CT+TLA GVN
Sbjct: 817 ILAEEADSVNDPGLKDLMPYGFGIHHAGMSKADRTSVEDLFADGSLQVLVCTATLAWGVN 876
Query: 281 LPAQRVIIRDSYV----GRDFISLNMYK--QMVGRAGRTGLQESGESIMLCKTMQDFLRF 334
LPA VII+ + V ++ L+ QM+GRAGR GE I++ T + +
Sbjct: 877 LPAHCVIIKGTQVYSPEKGSWVELSPQDVLQMLGRAGRPQYDSFGEGIIIT-TQAELQYY 935
Query: 335 SSMMNAGPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQ-LKSPE---- 389
S++N PI S + +L E+V N+ S E V+ L LF + L+SP
Sbjct: 936 LSLLNQQ-LPIESQLMSKLADNLNAEIVLGNVRSREEGVEWLGYTYLFVRMLRSPGLYSI 994
Query: 390 ----DQQTFLETTLSEIV--ASLLASKGTMLTMN-EAGHLSLTSIAKAAVQAGLSHDVCL 442
+ T LE +++ A+++ K ++ + + G L T + + A +SH L
Sbjct: 995 GADYEHDTSLEQRRVDLIHSAAMVLEKSNLVKYDRKTGKLQATELGRIASHYYISHGSML 1054
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 98/206 (47%), Gaps = 19/206 (9%)
Query: 234 LEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVII--RDS 291
L E I +G+ Y+H L+ ++R++ Y G LQ++ + + ++L A VII S
Sbjct: 1667 LAESISHGIGYYHEALSTSDKRIVSHLYKIGALQVMLASRDVCWELDLTAHLVIIMGTQS 1726
Query: 292 YVGRD--FISLNMYK--QMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISS 347
+ GR+ +I + QM G+A R G+ +++ ++ + +N P+ S
Sbjct: 1727 FDGREHRYIDYPISDILQMFGKATRPREDRIGKGVLMVPAVKREY-YKKFLNEA-LPMES 1784
Query: 348 HMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQ--LKSP------EDQQTFLETTL 399
H+ L D + ++ +S +D + ++ FY+ L +P + L T L
Sbjct: 1785 HLQ-LYLHDAFVTEISTKTITSTQDAVDWMTYSYFYRRLLANPSYYGLTDVSHEGLSTFL 1843
Query: 400 SEIVASLLA--SKGTMLTMNEAGHLS 423
SE+V + L ++ ++ M+E ++S
Sbjct: 1844 SELVENTLKELAEAQIVDMDEDENIS 1869
>gi|391864686|gb|EIT73980.1| RNA helicase BRR2, DEAD-box superfamily [Aspergillus oryzae 3.042]
Length = 2210
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 121/482 (25%), Positives = 224/482 (46%), Gaps = 53/482 (10%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V E+ +L K E + + E G + TK+Q+ + I + T EK + +
Sbjct: 600 LVQEQVGNLGKRLEPYGIKVAELTGDRQL---TKQQIAETQIIVTTPEKFDVVTRKASET 656
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVL----YLKKSIQIFAMSATIGNINALS 116
+ I + LI+IDE H+L++ RGP++E +VS+ + + ++I +SAT+ N +
Sbjct: 657 SYIKLVRLIIIDEIHLLHD-DRGPVIESIVSRTIRKGEQTGEPVRIVGLSATLPNYRDVG 715
Query: 117 TF-----IEGITYVENS-RPTK-HSEYVTV-DKRVFQSFDGKSLTEIYADNLDYSLTGSG 168
+F ++G+ + + S RP E++ V DK+ + K++ +I + +
Sbjct: 716 SFLRVDPVKGLFHFDGSYRPCPLKQEFIGVTDKKAIKQL--KTMNDICYNKV-------- 765
Query: 169 PDAVLHLVQGNLMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEA--LKEEN 226
+ + Q +LIF S+ + A ++ D+ + + + D L EE
Sbjct: 766 ---IEQVGQRRNQMLIFVHSRKETAKTAKYIR-DKALEMETIGQILRSDAASRAILAEEA 821
Query: 227 DGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRV 286
+ +L++ + YG HHA L+ +R ++ + G++Q++ CT+TLA G+NLPA V
Sbjct: 822 ESVDDASLKDLLPYGFGIHHAGLSLADRDSVQALFADGSIQVLVCTATLAWGINLPAHTV 881
Query: 287 IIRDSYV----GRDFISLNMYK--QMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNA 340
II+ + V ++ L+ QM+GRAGR GE I++ + + + S+MN
Sbjct: 882 IIKGTQVYSPEKGSWVELSPQDVLQMLGRAGRPQYDTFGEGIIIT-SQTEIQYYLSLMNQ 940
Query: 341 GPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQ-LKSPE--------DQ 391
PI S + ++ EVV N+ + E V L LF + L+SP +
Sbjct: 941 Q-LPIESQLISKLADNMNAEVVLGNIRTRDEGVDWLGYTYLFVRMLRSPGLYSVGADYEN 999
Query: 392 QTFLETTLSEIV---ASLLASKGTMLTMNEAGHLSLTSIAKAAVQAGLSHDVCLIIYSDL 448
LE +++ A +L G + + G L T + + A + H+ ++ YS
Sbjct: 1000 DDALEQKRVDLIHSAAVVLERAGLVKYEKKTGRLQSTELGRVASHYYIGHN-SMLTYSQH 1058
Query: 449 LH 450
L
Sbjct: 1059 LQ 1060
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 85/411 (20%), Positives = 181/411 (44%), Gaps = 52/411 (12%)
Query: 37 LNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKV--- 93
L + + + T + L + + + L + DE HML G + E VVS++
Sbjct: 1476 LERADLVLATPTQWDVLSRQWQRRKNVQTVQLFIADELHMLGG-YGGYVYEVVVSRMHSI 1534
Query: 94 -LYLKKSIQIFAMSATIGNINALSTFIEGITY-VENSRPTKHSEYVTVDKRVFQSFDGKS 151
L L+ ++I +S ++ N + +I + + N P H+ + ++ + +S
Sbjct: 1535 ALQLENGMRIIGLSVSLANARDIGEWIGANKHTIYNFSP--HARPIPLELHI------QS 1586
Query: 152 LTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRL--------QFDR 203
+ + +L ++ ++L L + +IF ++ + A+ L DR
Sbjct: 1587 FSIPHFPSLMLAMARPAYSSILQL-SPDKPAIIFVPNRKQTRSTAMDLLAACATDDDEDR 1645
Query: 204 FPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLA 263
F E L+ ++E+ L E + +G+ Y+H L+A ++R++ +
Sbjct: 1646 FLNAD---VNELAPLLNRVQEQT-------LAESLSHGIGYYHEALSATDKRIVSHLFSI 1695
Query: 264 GTLQIICCTSTLAAGVNLPAQRVIIRDS--YVGRD--FISLNMYK--QMVGRAGRTGLQE 317
G +Q++ + + +NL A VI+ + + GR+ +I + + QM G+A R G +
Sbjct: 1696 GAIQVLLASRDVCWELNLTAHLVIVMGTQFFEGREHRYIDYPISEVLQMFGKASRPGEDK 1755
Query: 318 SGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKTLI 377
G +++ +++ + +N P+ SH+ L D + ++ + +S +D +
Sbjct: 1756 IGRGVLMVPSVKREY-YKKFLNEA-LPVESHLQ-AYLHDAFVTEISTKVVASTQDAVDWM 1812
Query: 378 KHTLFYQ--LKSP------EDQQTFLETTLSEIVASLLA--SKGTMLTMNE 418
HT FY+ L +P + L T LSE+V + L S+ ++ ++E
Sbjct: 1813 THTYFYRRLLANPSFYGLTDVSYEGLSTFLSELVENTLKELSEAKIIDLDE 1863
>gi|326433213|gb|EGD78783.1| RNA helicase [Salpingoeca sp. ATCC 50818]
Length = 2166
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 111/437 (25%), Positives = 188/437 (43%), Gaps = 67/437 (15%)
Query: 14 EEFKFYLEEYAGVK-----GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGL 68
E++K E G K G P R + + + + T EK + S N + ++ L
Sbjct: 1374 EDWKVRFGEKLGKKVVELTGDVTPDARAIERADVIVTTPEKWDGISRSWQSRNYVRKVVL 1433
Query: 69 IVIDEFHMLNEPQRGPILECVVSKVLYLKK----SIQIFAMSATIGNINALSTFIEGIT- 123
+VIDE H+L RGP+LE +VS+ Y+ +++ +S + N + L+ ++ GIT
Sbjct: 1434 LVIDEIHLLGG-DRGPVLEVIVSRTNYISAHTAHKVRVVGLSTALANAHDLANWL-GITR 1491
Query: 124 -----YVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQG 178
+ + RP ++++ Q F GK A S+ A+
Sbjct: 1492 AGLFNFKPSVRPVPLTKHI-------QGFPGKHYCPRMA-----SMNKPAYSAI-RTHSP 1538
Query: 179 NLMVLIFCSSKIACSNLALRL-----QFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTN 233
LIF SS+ AL L D+ + E E L+ +++ N
Sbjct: 1539 TKPALIFVSSRRQTRLTALDLISCCVSDDQPKQWLHMSEVEMESLLTTIRD-------AN 1591
Query: 234 LEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS-- 291
L + +G+ HHA L +R+++EE +L +Q++ T+TLA GVNLPA VI++ +
Sbjct: 1592 LRHALSFGIGMHHAGLHERDRKVVEELFLNQKIQVLVATATLAWGVNLPAHLVIVKGTEF 1651
Query: 292 -------YVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEP 344
YV D + QM GRAGR + G +++ + + + M+ P P
Sbjct: 1652 FDGKTKRYVDFDITDV---LQMTGRAGRPQFDDHGVAVIFVQDTKKHF-YKKFMHE-PFP 1706
Query: 345 ISSHMDPPTLVDLILEVVAANLCSSLEDV---------KTLIKHTLFYQL--KSPEDQQT 393
+ S + + E+VA + S E + + L+ + +Y L S +D
Sbjct: 1707 VESSLAEQLPNHINAEIVAGTITSKQEAMDYLTWTYFYRRLVMNPSYYGLTDTSQDDINQ 1766
Query: 394 FLETTLSEIVASLLASK 410
FL + VA L AS+
Sbjct: 1767 FLSELVEHTVAELEASR 1783
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 113/445 (25%), Positives = 199/445 (44%), Gaps = 76/445 (17%)
Query: 33 TKRQLNKKSIYICTIEKGSKLIGSLIQENRIDE-IGLIVIDEFHMLNEPQRGPILECVVS 91
TK ++ + ++ + T EK + + + + + + L++IDE H+L++ +RG ++E +V+
Sbjct: 549 TKAEIIRTNMLVTTPEKWDVVTRKGMGDVALTQLVKLLIIDEVHLLHD-ERGAVIESLVA 607
Query: 92 KVLYLKKS----IQIFAMSATIGNINALSTFI-----EGITYVENS-RPTKHSEYVTVDK 141
+ L +S I+I +SAT+ N ++ F+ +G+ + + RP
Sbjct: 608 RTLRQVESSQSMIRIVGLSATLPNYVDVANFLRVNPHKGLFHFDGGFRPVP--------- 658
Query: 142 RVFQSFDGKSLTEIYA--DNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRL 199
+ QSF G +A D +D D VL V V++F S+ N A RL
Sbjct: 659 -LQQSFVGVKGKNRFAVNDEMDKLCF----DVVLENVLRGEQVMVFVHSRNGTLNTAARL 713
Query: 200 --------QFDRF--PGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADL 249
Q F +KE+ +K A +L + L G A HHA L
Sbjct: 714 IDLATKENQMAAFDCSDSKEFPLAQK-----AFARCKHKQLKSFLGN----GFAVHHAGL 764
Query: 250 TAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIR-----DSYVGR--DFISLNM 302
+R ++E+ + ++++ CT+TLA GVNLPA V+I+ D+ G+ D L++
Sbjct: 765 LRSDRNVVEKYFAKKLIKVLVCTATLAWGVNLPAHAVVIKGTELYDATRGQIVDLGILDV 824
Query: 303 YKQMVGRAGRTGLQESGESIMLCKTMQDFLR--FSSMMNAGPEPISSHMDPPTLVDLILE 360
+Q+ GRAGR GE+ ++ T D L + +MN PI S+ L D +
Sbjct: 825 -QQIFGRAGRPQFDTFGEATLM--TTHDKLSHYITRIMNQ--RPIESNF-LSRLPDNLNA 878
Query: 361 VVAANLCSSLEDVKTLIKHTLFY--QLKSPE---------DQQTFLETTLSEIV---ASL 406
VA + + + + +T Y LK+P ++ LE +++ A
Sbjct: 879 EVALGTVTDVREAVAWLSYTYLYVRMLKNPHVYGLTPKEANEDVMLERHREKMIIEAARQ 938
Query: 407 LASKGTMLTMNEAGHLSLTSIAKAA 431
L + + AG+LS T + + A
Sbjct: 939 LDDRRMLRFQETAGYLSSTDVGRIA 963
>gi|405121101|gb|AFR95870.1| pre-mRNA splicing factor, partial [Cryptococcus neoformans var.
grubii H99]
Length = 2153
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 107/394 (27%), Positives = 191/394 (48%), Gaps = 54/394 (13%)
Query: 24 AGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRG 83
A + G TK+Q+++ I + T EK + + + + LI++DE H+L++ RG
Sbjct: 573 AELTGDSQLTKQQISETQIIVTTPEKWDVITRKSTDTSYTNLVRLIIVDEIHLLHD-DRG 631
Query: 84 PILECVVSKVL----YLKKSIQIFAMSATIGNINALSTFI-----EGITYVENS-RPTK- 132
P+LE ++S+ + +++ +SAT+ N ++TF+ +G+ Y + S RP
Sbjct: 632 PVLESILSRTIRKMDQTHDDVRVVGLSATLPNYKDVATFLRVDPKQGLFYFDASYRPVGL 691
Query: 133 HSEYVTV-DKRVFQSFDGKSLTEI-YADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKI 190
+++ V +K+ + +++ E+ Y L+Y+ G L+F S+
Sbjct: 692 KQQFIGVTEKKAIKRL--QTINEVCYEKVLNYA--------------GRSQTLVFVHSRK 735
Query: 191 ACSNLALRLQFDRFPGTKEYKKQ-------EKEDLIEALKEENDGKLSTNLEECILYGVA 243
+ A L+ KE Q +E LI+ + D KL ++ + +G
Sbjct: 736 ETAKTAAFLRDTAM--EKETLTQFINPEGASREILIQEAAQCKDAKL----KDLLPFGFG 789
Query: 244 YHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYV-----GR-DF 297
HHA ++ +R +E+ + G +Q++CCT+TLA GVNLPA VII+ + V G+
Sbjct: 790 IHHAGMSREDRTTVEQLFFEGHIQVLCCTATLAWGVNLPAHTVIIKGTQVYNPEKGKWSE 849
Query: 298 ISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDL 357
+S QM+GRAGR GE I++ + ++S+MN PI S + +L
Sbjct: 850 LSPQDVLQMLGRAGRPQFDTYGEGIIIT-NHGELQYYTSLMNQQ-LPIESQFVSRMVDNL 907
Query: 358 ILEVVAANLCSSLEDVKTLIKHTLFY--QLKSPE 389
E+V N+ + E V+ L +T Y L+SP+
Sbjct: 908 NAEIVLGNVRNRDEGVQWL-GYTYLYVRMLESPK 940
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 92/405 (22%), Positives = 169/405 (41%), Gaps = 60/405 (14%)
Query: 37 LNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYL 96
L K + +CT + L + IGL++ DE ++ G E +VS+ Y+
Sbjct: 1424 LRKADVVVCTPSQWDLLSRRWKTRKDVQNIGLLIADELQLIGG-DVGSTYEVIVSRTRYV 1482
Query: 97 KK----SIQIFAMSATIGNINALSTFIEGITY-VENSRPTKHSEYVTVDKRVFQSFDGKS 151
+ + +I A S ++ N L +I + V N P + V QSF+
Sbjct: 1483 SQQTGITTRIVACSVSLSNARDLGDWIGASSQTVFNFSPAARPLPLEVH---LQSFNVPH 1539
Query: 152 LTEIYADNLDYSLTGSGPDAVLHLVQ--GNLMVLIFCSSKIACSNLALRLQFDRFPGTKE 209
+ L + P A L +V+ + F +S+ C A + E
Sbjct: 1540 FPSLM-------LAMAKP-AYLSMVEHSAGRPTICFVASRKQCKLTANDILTYCLADDDE 1591
Query: 210 YK--KQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQ 267
+ E+EDL L+ +D +L+E + YG+ Y+H L+ +++++ + G ++
Sbjct: 1592 TRFLNVEREDLEPHLERLSD----EDLKETLRYGIGYYHEALSKLDKKIVTTLFEEGAIK 1647
Query: 268 IICCTSTLAAGVNLPAQRVIIRDSYVGRDFISLNMYK----------QMVGRAGRTGLQE 317
++ + A + A VII +G + ++ QM+GRA R +
Sbjct: 1648 VLVASKDTAWSLPSTAYMVII----MGVQYFDGQEHRYVDYAIADILQMMGRACRPTIDT 1703
Query: 318 SGESIMLC-KTMQDFLRFSSMMNAGPEPISSHMDPPTLVD-LILEVV---------AANL 366
S +++C +T +DF F +N P+ S + P L D E+V A +
Sbjct: 1704 SSRCVLMCQQTRKDF--FKKFLNEA-LPVESSL-PSFLHDHFNAEIVARTIENKQDAVDW 1759
Query: 367 CSSLEDVKTLIKHTLFYQLK--SPEDQQTFL----ETTLSEIVAS 405
C+ + L+++ FY L+ +P +L ETTL+++V S
Sbjct: 1760 CTWTWFYRRLMQNPGFYNLQGTTPTHIGEYLSELVETTLNDLVNS 1804
>gi|302506865|ref|XP_003015389.1| hypothetical protein ARB_06512 [Arthroderma benhamiae CBS 112371]
gi|291178961|gb|EFE34749.1| hypothetical protein ARB_06512 [Arthroderma benhamiae CBS 112371]
Length = 2231
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 122/480 (25%), Positives = 222/480 (46%), Gaps = 64/480 (13%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V E+ + K + + + E G + TK+Q+ + + T EK +
Sbjct: 601 LVQEQVGNFGKRLQHYGIKVSELTGDRQL---TKQQIADTQLIVTTPEKWDIITRKATDT 657
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVL----YLKKSIQIFAMSATIGNINALS 116
+ + L++IDE H+L++ +RGP+LE +VS+ + + +++ +SAT+ N +
Sbjct: 658 SYTRLVRLVIIDEIHLLHD-ERGPVLESIVSRTIRKTEQTGEPVRLVGLSATLPNYRDVG 716
Query: 117 TF-----IEGITYVENS-RPTK-HSEYVTV-DKRVFQSFDGKSLTEI-YADNLDYSLTGS 167
+F I G+ + + + RP E++ V DK+ + K++ +I Y LD G+
Sbjct: 717 SFLRVDPIHGLFHFDGTFRPCPLKQEFIGVTDKKAIKQL--KTMNDICYTKVLDQ--VGA 772
Query: 168 GPDAVLHLVQGNLMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEA------ 221
+ +LIF S+ L+ R+ K + + ++ +
Sbjct: 773 NKN----------QMLIFVHSRKET------LKTARYIRDKAVEMETIGQILRSDAASRA 816
Query: 222 -LKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVN 280
L EE D L++ + YG HHA ++ +R +E+ + G+LQ++ CT+TLA GVN
Sbjct: 817 ILAEEADSVNDPGLKDLMPYGFGIHHAGMSKADRTSVEDLFADGSLQVLVCTATLAWGVN 876
Query: 281 LPAQRVIIRDSYV----GRDFISLNMYK--QMVGRAGRTGLQESGESIMLCKTMQDFLRF 334
LPA VII+ + V ++ L+ QM+GRAGR GE I++ T + +
Sbjct: 877 LPAHCVIIKGTQVYSPEKGSWVELSPQDVLQMLGRAGRPQYDSFGEGIIIT-TQAELQYY 935
Query: 335 SSMMNAGPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQ-LKSPE---- 389
S++N PI S + +L E+V N+ S E V+ L LF + L+SP
Sbjct: 936 LSLLNQQ-LPIESQLMSKLADNLNAEIVLGNVRSREEGVEWLGYTYLFVRMLRSPGLYSI 994
Query: 390 ----DQQTFLETTLSEIV--ASLLASKGTMLTMN-EAGHLSLTSIAKAAVQAGLSHDVCL 442
+ T LE +++ A+++ K ++ + + G L T + + A +SH L
Sbjct: 995 GADYEHDTSLEQRRVDLIHSAAMVLEKSNLVKYDRKTGKLQATELGRIASHYYISHSSML 1054
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 98/206 (47%), Gaps = 19/206 (9%)
Query: 234 LEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVII--RDS 291
L E I +G+ Y+H L+ ++R++ Y G LQ++ + + ++L A VII S
Sbjct: 1667 LAESISHGIGYYHEALSTSDKRIVSHLYKIGALQVMLASRDVCWELDLTAHLVIIMGTQS 1726
Query: 292 YVGRD--FISLNMYK--QMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISS 347
+ GR+ +I + QM G+A R G+ +++ ++ + +N P+ S
Sbjct: 1727 FDGREHRYIDYPISDILQMFGKATRPREDRIGKGVLMVPAVKREY-YKKFLNEA-LPMES 1784
Query: 348 HMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQ--LKSP------EDQQTFLETTL 399
H+ L D + ++ +S +D + ++ FY+ L +P + L T L
Sbjct: 1785 HLQ-LYLHDAFVTEISTKTITSTQDAVDWMTYSYFYRRLLANPSYYGLTDVSHEGLSTFL 1843
Query: 400 SEIVASLLA--SKGTMLTMNEAGHLS 423
SE+V + L ++ ++ M+E ++S
Sbjct: 1844 SELVENTLKELAEAQIVDMDEDENIS 1869
>gi|388854230|emb|CCF52149.1| probable ATP dependent RNA helicase [Ustilago hordei]
Length = 2219
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 117/453 (25%), Positives = 207/453 (45%), Gaps = 78/453 (17%)
Query: 33 TKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSK 92
TK Q+ + I + T EK + + + + L+++DE H+L++ RGP+LE ++S+
Sbjct: 621 TKAQIAETQIIVTTPEKWDVISRKSTDASYTNLVRLLIVDEIHLLHD-DRGPVLEAIISR 679
Query: 93 VL----YLKKSIQIFAMSATIGNINALSTFIE-----GITYVE-NSRPTK-HSEYVTV-D 140
+ + +++ +SAT+ N ++TF+ G+ Y E N RP +YV + +
Sbjct: 680 TIRRMEQMSDPVRLVGLSATLPNYQDVATFLRVNPKTGLFYFEANYRPCPLKQQYVGITE 739
Query: 141 KRVFQSFDGKSLTEI-YADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRL 199
K+ + + E+ Y LD + G VLIF S+ + A +
Sbjct: 740 KKAIKRL--LVMNEVTYEKTLDQA--------------GKNQVLIFVHSRKEAAKTAKFI 783
Query: 200 Q--------FDRF----PGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHA 247
+ +RF P ++E + E E++ E +L++ + YG HHA
Sbjct: 784 RDKAMEQETLNRFLPPSPASQEVLRSELENVTEG-----------DLKDVMPYGFGIHHA 832
Query: 248 DLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYV-----GR--DFISL 300
++ +R L+E + G LQ++ T+TLA GVNLPA VII+ + + GR +
Sbjct: 833 GMSRLDRELVEALFADGHLQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGRWCEITPQ 892
Query: 301 NMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILE 360
+M QM+GRAGR GE I++ + + S++N PI S + +L E
Sbjct: 893 DML-QMLGRAGRPQYDTFGEGIIIT-NHSELQYYLSLLNQQ-LPIESQLVSKLADNLNAE 949
Query: 361 VVAANLCSSLEDVKTLIKHTLFY--QLKSP---------EDQQTFLETTLSEIV---ASL 406
+V + + E V L +T Y L+SP + FLE +++V A+L
Sbjct: 950 IVLGTIRNRDEAVAWL-GYTYLYVRMLRSPTLYSVTADYAEDDPFLEQKRADVVHTAAAL 1008
Query: 407 LASKGTMLTMNEAGHLSLTSIAKAAVQAGLSHD 439
L G + + G+ + + + A ++HD
Sbjct: 1009 LEKCGLLRYERKTGNFTSNELGRIASHYYITHD 1041
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 94/411 (22%), Positives = 163/411 (39%), Gaps = 38/411 (9%)
Query: 25 GVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGP 84
G+ G+ R L + I L Q + + L ++DE HM+ + + GP
Sbjct: 1453 GLTGETSADLRLLEMSDLVIAIPTHWDVLSRRWRQRKNVQSVSLYILDEIHMIGDVRIGP 1512
Query: 85 ILECVVSKVLYLKKSIQ----IFAMSATIGNINALSTFIEGIT-YVENSRPTKHSEYVTV 139
E V S+ ++ Q + A+S + N + ++ V N P+ + V
Sbjct: 1513 TYEIVASRARFIAAQTQNPTRMIALSVPLANARDVGDWLGASGGNVFNFAPSAREVPMEV 1572
Query: 140 DKRVFQSFDGKSL-----TEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSN 194
+ F SL Y ++Y+ S V Q L + IA S+
Sbjct: 1573 HLQGFNVPHFPSLMLAMAKPAYLAMVEYADDQSVIAFVPSRKQAKLTANDILAYVIADSD 1632
Query: 195 LALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGER 254
D G + E EDL L+ D +L E + G+AY+H LT +R
Sbjct: 1633 RDGEGSGDE--GESRFLNIEMEDLEPHLQRVQDREL----RELLAMGIAYYHEGLTKNDR 1686
Query: 255 RLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRD--SYVGRDF----ISLNMYKQMVG 308
R++E + A +++I + +A + L A V+I +Y G++ L + QMVG
Sbjct: 1687 RIVERLFNADAIRVIIASKEVAWCMPLKAHLVLIMSLQTYSGQEHRYIDYPLPLVLQMVG 1746
Query: 309 RAGRTGLQ-ESGESIMLCK-TMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAANL 366
S I+LC+ T +D+ F ++ PI S + P ++ D + +
Sbjct: 1747 HCTVPHPDFGSSRCILLCQNTRKDY--FKKFLSES-LPIESQL-PLSIHDFFNSEIVSRT 1802
Query: 367 CSSLEDVKTLIKHTLFYQLKSPEDQQ---------TFLETTLSEIVASLLA 408
+ ++ TL Y+ + P++ Q T + LSE+V + LA
Sbjct: 1803 IDDKQAAVDILTWTLMYR-RLPQNPQAYNCQGKSMTHIGDYLSELVENTLA 1852
>gi|169766522|ref|XP_001817732.1| pre-mRNA-splicing factor brr2 [Aspergillus oryzae RIB40]
gi|83765587|dbj|BAE55730.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 2210
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 121/482 (25%), Positives = 224/482 (46%), Gaps = 53/482 (10%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V E+ +L K E + + E G + TK+Q+ + I + T EK + +
Sbjct: 600 LVQEQVGNLGKRLEPYGIKVAELTGDRQL---TKQQIAETQIIVTTPEKFDVVTRKASET 656
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVL----YLKKSIQIFAMSATIGNINALS 116
+ I + LI+IDE H+L++ RGP++E +VS+ + + ++I +SAT+ N +
Sbjct: 657 SYIKLVRLIIIDEIHLLHD-DRGPVIESIVSRTIRKGEQTGEPVRIVGLSATLPNYRDVG 715
Query: 117 TF-----IEGITYVENS-RPTK-HSEYVTV-DKRVFQSFDGKSLTEIYADNLDYSLTGSG 168
+F ++G+ + + S RP E++ V DK+ + K++ +I + +
Sbjct: 716 SFLRVDPVKGLFHFDGSYRPCPLKQEFIGVTDKKAIKQL--KTMNDICYNKV-------- 765
Query: 169 PDAVLHLVQGNLMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEA--LKEEN 226
+ + Q +LIF S+ + A ++ D+ + + + D L EE
Sbjct: 766 ---IEQVGQRRNQMLIFVHSRKETAKTAKYIR-DKALEMETIGQILRSDAASRAILAEEA 821
Query: 227 DGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRV 286
+ +L++ + YG HHA L+ +R ++ + G++Q++ CT+TLA G+NLPA V
Sbjct: 822 ESVDDASLKDLLPYGFGIHHAGLSLADRDSVQALFADGSIQVLVCTATLAWGINLPAHTV 881
Query: 287 IIRDSYV----GRDFISLNMYK--QMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNA 340
II+ + V ++ L+ QM+GRAGR GE I++ + + + S+MN
Sbjct: 882 IIKGTQVYSPEKGSWVELSPQDVLQMLGRAGRPQYDTFGEGIIIT-SQTEIQYYLSLMNQ 940
Query: 341 GPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQ-LKSPE--------DQ 391
PI S + ++ EVV N+ + E V L LF + L+SP +
Sbjct: 941 Q-LPIESQLISKLADNMNAEVVLGNIRTRDEGVDWLGYTYLFVRMLRSPGLYSAGADYEN 999
Query: 392 QTFLETTLSEIV---ASLLASKGTMLTMNEAGHLSLTSIAKAAVQAGLSHDVCLIIYSDL 448
LE +++ A +L G + + G L T + + A + H+ ++ YS
Sbjct: 1000 DDALEQKRVDLIHSAAVVLERAGLVKYEKKTGRLQSTELGRVASHYYIGHN-SMLTYSQH 1058
Query: 449 LH 450
L
Sbjct: 1059 LQ 1060
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 85/411 (20%), Positives = 181/411 (44%), Gaps = 52/411 (12%)
Query: 37 LNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKV--- 93
L + + + T + L + + + L + DE HML G + E VVS++
Sbjct: 1476 LERADLVLATPTQWDVLSRQWQRRKNVQTVQLFIADELHMLGG-YGGYVYEVVVSRMHSI 1534
Query: 94 -LYLKKSIQIFAMSATIGNINALSTFIEGITY-VENSRPTKHSEYVTVDKRVFQSFDGKS 151
L L+ ++I +S ++ N + +I + + N P H+ + ++ + +S
Sbjct: 1535 ALQLENGMRIIGLSVSLANARDIGEWIGANKHTIYNFSP--HARPIPLELHI------QS 1586
Query: 152 LTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRL--------QFDR 203
+ + +L ++ ++L L + +IF ++ + A+ L DR
Sbjct: 1587 FSIPHFPSLMLAMARPAYSSILQL-SPDKPAIIFVPNRKQTRSTAMDLLAACATDDDEDR 1645
Query: 204 FPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLA 263
F E L+ ++E+ L E + +G+ Y+H L+A ++R++ +
Sbjct: 1646 FLNAD---VNELAPLLNRVQEQT-------LAESLSHGIGYYHEALSATDKRIVSHLFSI 1695
Query: 264 GTLQIICCTSTLAAGVNLPAQRVIIRDS--YVGRD--FISLNMYK--QMVGRAGRTGLQE 317
G +Q++ + + +NL A VI+ + + GR+ +I + + QM G+A R G +
Sbjct: 1696 GAIQVLLASRDVCWELNLTAHLVIVMGTQFFEGREHRYIDYPISEVLQMFGKASRPGEDK 1755
Query: 318 SGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKTLI 377
G +++ +++ + +N P+ SH+ L D + ++ + +S +D +
Sbjct: 1756 IGRGVLMVPSVKREY-YKKFLNEA-LPVESHLQ-AYLHDAFVTEISTKVVASTQDAVDWM 1812
Query: 378 KHTLFYQ--LKSP------EDQQTFLETTLSEIVASLLA--SKGTMLTMNE 418
HT FY+ L +P + L T LSE+V + L S+ ++ ++E
Sbjct: 1813 THTYFYRRLLANPSFYGLTDVSYEGLSTFLSELVENTLKELSEAKIIDLDE 1863
>gi|407920141|gb|EKG13359.1| Helicase [Macrophomina phaseolina MS6]
Length = 904
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 85/300 (28%), Positives = 141/300 (47%), Gaps = 35/300 (11%)
Query: 44 ICTIEKGSKLIGSLIQENR-IDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQI 102
I T EK + R + + L +IDE H+L E RG LE VVS++ + ++
Sbjct: 318 ITTPEKWDSMTRRWRDHERLVQMVKLFLIDEVHILKE-DRGATLEAVVSRMKTVGTDVRF 376
Query: 103 FAMSATIGNINALSTFIEGIT-----------YVENSRPTKHSEYVTVDKRVFQSFDGKS 151
A+SAT+ N ++ ++ + + E RP K +V F G
Sbjct: 377 VALSATVPNFGDIAAWLGKDSKNQYFPAPTERFGEEFRPVKLQRHVI----GFGCGVGNQ 432
Query: 152 LTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRLQFDRFPGTKEYK 211
+ LD L G ++ +++FC ++ +C A L + + +
Sbjct: 433 SEFAFDQLLDKKLPG-----IISKYSQRKPIMVFCFTRKSCELTAKYLVDWWIESSPQQR 487
Query: 212 KQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICC 271
E+ + ++ L C YGVA+HHA L+ +++ +E+AYLAG L +ICC
Sbjct: 488 YWEQPRRLPTFED-------ATLRNCTTYGVAFHHAGLSLNDKQSVEKAYLAGELNVICC 540
Query: 272 TSTLAAGVNLPAQRVIIRD--SYVG---RDFISLNMYKQMVGRAGRTGLQESGESIMLCK 326
TSTLA GVNLP VII++ +Y+ R+ L + QM+GRAGR +S ++++ +
Sbjct: 541 TSTLAVGVNLPCHFVIIKNTVTYIHPTIRECSDLEI-TQMLGRAGRPQFDDSAVAVIVTR 599
>gi|238483251|ref|XP_002372864.1| pre-mRNA splicing helicase, putative [Aspergillus flavus NRRL3357]
gi|220700914|gb|EED57252.1| pre-mRNA splicing helicase, putative [Aspergillus flavus NRRL3357]
Length = 2210
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 121/482 (25%), Positives = 224/482 (46%), Gaps = 53/482 (10%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V E+ +L K E + + E G + TK+Q+ + I + T EK + +
Sbjct: 600 LVQEQVGNLGKRLEPYGIKVAELTGDRQL---TKQQIAETQIIVTTPEKFDVVTRKASET 656
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVL----YLKKSIQIFAMSATIGNINALS 116
+ I + LI+IDE H+L++ RGP++E +VS+ + + ++I +SAT+ N +
Sbjct: 657 SYIKLVRLIIIDEIHLLHD-DRGPVIESIVSRTIRKGEQTGEPVRIVGLSATLPNYRDVG 715
Query: 117 TF-----IEGITYVENS-RPTK-HSEYVTV-DKRVFQSFDGKSLTEIYADNLDYSLTGSG 168
+F ++G+ + + S RP E++ V DK+ + K++ +I + +
Sbjct: 716 SFLRVDPVKGLFHFDGSYRPCPLKQEFIGVTDKKAIKQL--KTMNDICYNKV-------- 765
Query: 169 PDAVLHLVQGNLMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEA--LKEEN 226
+ + Q +LIF S+ + A ++ D+ + + + D L EE
Sbjct: 766 ---IEQVGQRRNQMLIFVHSRKETAKTAKYIR-DKALEMETIGQILRSDAASRAILAEEA 821
Query: 227 DGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRV 286
+ +L++ + YG HHA L+ +R ++ + G++Q++ CT+TLA G+NLPA V
Sbjct: 822 ESVDDASLKDLLPYGFGIHHAGLSLADRDSVQALFADGSIQVLVCTATLAWGINLPAHTV 881
Query: 287 IIRDSYV----GRDFISLNMYK--QMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNA 340
II+ + V ++ L+ QM+GRAGR GE I++ + + + S+MN
Sbjct: 882 IIKGTQVYSPEKGSWVELSPQDVLQMLGRAGRPQYDTFGEGIIIT-SQTEIQYYLSLMNQ 940
Query: 341 GPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQ-LKSPE--------DQ 391
PI S + ++ EVV N+ + E V L LF + L+SP +
Sbjct: 941 Q-LPIESQLISKLADNMNAEVVLGNIRTRDEGVDWLGYTYLFVRMLRSPGLYSVGADYEN 999
Query: 392 QTFLETTLSEIV---ASLLASKGTMLTMNEAGHLSLTSIAKAAVQAGLSHDVCLIIYSDL 448
LE +++ A +L G + + G L T + + A + H+ ++ YS
Sbjct: 1000 DDALEQKRVDLIHSAAVVLERAGLVKYEKKTGRLQSTELGRVASHYYIGHN-SMLTYSQH 1058
Query: 449 LH 450
L
Sbjct: 1059 LQ 1060
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 85/411 (20%), Positives = 181/411 (44%), Gaps = 52/411 (12%)
Query: 37 LNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKV--- 93
L + + + T + L + + + L + DE HML G + E VVS++
Sbjct: 1476 LERADLVLATPTQWDVLSRQWQRRKNVQTVQLFIADELHMLGG-YGGYVYEVVVSRMHSI 1534
Query: 94 -LYLKKSIQIFAMSATIGNINALSTFIEGITY-VENSRPTKHSEYVTVDKRVFQSFDGKS 151
L L+ ++I +S ++ N + +I + + N P H+ + ++ + +S
Sbjct: 1535 ALQLENGMRIIGLSVSLANARDIGEWIGANKHTIYNFSP--HARPIPLELHI------QS 1586
Query: 152 LTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRL--------QFDR 203
+ + +L ++ ++L L + +IF ++ + A+ L DR
Sbjct: 1587 FSIPHFPSLMLAMARPAYSSILQL-SPDKPAIIFVPNRKQTRSTAMDLLAACATDDDEDR 1645
Query: 204 FPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLA 263
F E L+ ++E+ L E + +G+ Y+H L+A ++R++ +
Sbjct: 1646 FLNAD---VNELAPLLNRVQEQT-------LAESLSHGIGYYHEALSATDKRIVSHLFSI 1695
Query: 264 GTLQIICCTSTLAAGVNLPAQRVIIRDS--YVGRD--FISLNMYK--QMVGRAGRTGLQE 317
G +Q++ + + +NL A VI+ + + GR+ +I + + QM G+A R G +
Sbjct: 1696 GAIQVLLASRDVCWELNLTAHLVIVMGTQFFEGREHRYIDYPISEVLQMFGKASRPGEDK 1755
Query: 318 SGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKTLI 377
G +++ +++ + +N P+ SH+ L D + ++ + +S +D +
Sbjct: 1756 IGRGVLMVPSVKREY-YKKFLNEA-LPVESHLQ-AYLHDAFVTEISTKVVASTQDAVDWM 1812
Query: 378 KHTLFYQ--LKSP------EDQQTFLETTLSEIVASLLA--SKGTMLTMNE 418
HT FY+ L +P + L T LSE+V + L S+ ++ ++E
Sbjct: 1813 THTYFYRRLLANPSFYGLTDVSYEGLSTFLSELVENTLKELSEAKIIDLDE 1863
>gi|302655964|ref|XP_003019740.1| hypothetical protein TRV_06201 [Trichophyton verrucosum HKI 0517]
gi|291183508|gb|EFE39116.1| hypothetical protein TRV_06201 [Trichophyton verrucosum HKI 0517]
Length = 2231
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 122/480 (25%), Positives = 222/480 (46%), Gaps = 64/480 (13%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V E+ + K + + + E G + TK+Q+ + + T EK +
Sbjct: 601 LVQEQVGNFGKRLQHYGIKVSELTGDRQL---TKQQIADTQLIVTTPEKWDIITRKATDT 657
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVL----YLKKSIQIFAMSATIGNINALS 116
+ + L++IDE H+L++ +RGP+LE +VS+ + + +++ +SAT+ N +
Sbjct: 658 SYTRLVRLVIIDEIHLLHD-ERGPVLESIVSRTIRKTEQTGEPVRLVGLSATLPNYRDVG 716
Query: 117 TF-----IEGITYVENS-RPTK-HSEYVTV-DKRVFQSFDGKSLTEI-YADNLDYSLTGS 167
+F I G+ + + + RP E++ V DK+ + K++ +I Y LD G+
Sbjct: 717 SFLRVDPIHGLFHFDGTFRPCPLKQEFIGVTDKKAIKQL--KTMNDICYTKVLDQ--VGA 772
Query: 168 GPDAVLHLVQGNLMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEA------ 221
+ +LIF S+ L+ R+ K + + ++ +
Sbjct: 773 NKN----------QMLIFVHSRKET------LKTARYIRDKAVEMETIGQILRSDAASRA 816
Query: 222 -LKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVN 280
L EE D L++ + YG HHA ++ +R +E+ + G+LQ++ CT+TLA GVN
Sbjct: 817 ILAEEADSVNDPGLKDLMPYGFGIHHAGMSKADRTSVEDLFADGSLQVLVCTATLAWGVN 876
Query: 281 LPAQRVIIRDSYV----GRDFISLNMYK--QMVGRAGRTGLQESGESIMLCKTMQDFLRF 334
LPA VII+ + V ++ L+ QM+GRAGR GE I++ T + +
Sbjct: 877 LPAHCVIIKGTQVYSPEKGSWVELSPQDVLQMLGRAGRPQYDSFGEGIIIT-TQAELQYY 935
Query: 335 SSMMNAGPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQ-LKSPE---- 389
S++N PI S + +L E+V N+ S E V+ L LF + L+SP
Sbjct: 936 LSLLNQQ-LPIESQLMSKLADNLNAEIVLGNVRSREEGVEWLGYTYLFVRMLRSPGLYSI 994
Query: 390 ----DQQTFLETTLSEIV--ASLLASKGTMLTMN-EAGHLSLTSIAKAAVQAGLSHDVCL 442
+ T LE +++ A+++ K ++ + + G L T + + A +SH L
Sbjct: 995 GADYEHDTSLEQRRVDLIHSAAMVLEKSNLVKYDRKTGKLQATELGRIASHYYISHSSML 1054
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 98/206 (47%), Gaps = 19/206 (9%)
Query: 234 LEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVII--RDS 291
L E I +G+ Y+H L+ ++R++ Y G LQ++ + + ++L A VII S
Sbjct: 1667 LAESISHGIGYYHEALSTSDKRIVSHLYKIGALQVMLASRDVCWELDLTAHLVIIMGTQS 1726
Query: 292 YVGRD--FISLNMYK--QMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISS 347
+ GR+ +I + QM G+A R G+ +++ ++ + +N P+ S
Sbjct: 1727 FDGREHRYIDYPISDILQMFGKATRPREDRIGKGVLMVPAVKREY-YKKFLNEA-LPMES 1784
Query: 348 HMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQ--LKSP------EDQQTFLETTL 399
H+ L D + ++ +S +D + ++ FY+ L +P + L T L
Sbjct: 1785 HLQ-LYLHDAFVTEISTKTITSTQDAVDWMTYSYFYRRLLANPSYYGLTDVSHEGLSTFL 1843
Query: 400 SEIVASLLA--SKGTMLTMNEAGHLS 423
SE+V + L ++ ++ M+E ++S
Sbjct: 1844 SELVENTLKELAEAQIVDMDEDENIS 1869
>gi|170042848|ref|XP_001849123.1| activating signal cointegrator 1 complex subunit 3 [Culex
quinquefasciatus]
gi|167866280|gb|EDS29663.1| activating signal cointegrator 1 complex subunit 3 [Culex
quinquefasciatus]
Length = 2157
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 119/491 (24%), Positives = 217/491 (44%), Gaps = 85/491 (17%)
Query: 14 EEFKFYLEEYAGVK-----GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGL 68
+++K LE+ G + G P R + + + + T EK + S + + ++ L
Sbjct: 1360 DDWKHRLEKRLGKRVVELTGDVTPDIRAIRESHVIVTTPEKWDGISRSWQTRDYVRDVAL 1419
Query: 69 IVIDEFHMLNEPQRGPILECVVSKVLYL----KKSIQIFAMSATIGNINALSTFIE-GIT 123
IVIDE H+L E RGP+LE +VS+ ++ +++++I +S + N L+ ++ G+
Sbjct: 1420 IVIDEIHLLGE-DRGPVLEVIVSRTNFIASHTERTLRIVGLSTALANARDLANWLGIGMM 1478
Query: 124 YVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVL 183
+ N +P+ ++V Q F GK A ++ A+ L
Sbjct: 1479 GLYNFKPSVRPVPLSVH---IQGFPGKHYCPRMA-----TMNRPAFQAIRQYSPCT-PAL 1529
Query: 184 IFCSSKIACSNLALRL-----------QFDRFPGTKEYKKQEKEDLIEALKEENDGKLST 232
IF +S+ AL L QF P +QE + ++ +K+
Sbjct: 1530 IFVASRKQTRITALDLIAFLAGEDNPKQFLHIP------EQEMDQILMNIKD-------N 1576
Query: 233 NLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSY 292
NL+ + +G+ HHA L +R+ EE +L +Q++ T+TLA GVNLPA VII+
Sbjct: 1577 NLKLTLAFGIGIHHAGLQERDRKTAEELFLHRKIQVLIATATLAWGVNLPAHLVIIK--- 1633
Query: 293 VGRDFISLNMYK----------QMVGRAGRTGLQESGESIMLCKTMQDFLR-FSSMMNAG 341
G +F + + QM+GRAGR G + C + D + F
Sbjct: 1634 -GTEFFDGKLKRYVDMPITDVLQMMGRAGRPQFGNEG---IACVFVHDVKKNFYKKFLYD 1689
Query: 342 PEPISSHMDPPTLVDLILEVVAANLCSSLEDVKT--------------LIKHTLFYQLKS 387
P P+ S +L++++ + V A + + K L+++ +Y+L+
Sbjct: 1690 PFPVES-----SLLEVLPDHVNAEIVAGTVQTKQGVLDYLTWTYFFRRLLRNPAYYELED 1744
Query: 388 PEDQQT--FLETTLSEIVASLLASKGTMLTMNEAGHLSLTSIAKAAVQAGLSHDVCLIIY 445
E Q FL T + + +L+ + + +E G L TS+ + + +SH + +Y
Sbjct: 1745 IEQTQVNHFLSTLVQRTLDTLVRAGCVEIADDERGLLP-TSMGRISSYYYMSHQ-SMRLY 1802
Query: 446 SDLLHNKLNFC 456
+D L + ++F
Sbjct: 1803 ADTLRHDMSFV 1813
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 117/463 (25%), Positives = 220/463 (47%), Gaps = 67/463 (14%)
Query: 33 TKRQLNKKSIYICTIEKGS----KLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILEC 88
TK +L + + + T EK K G + I + L++IDE H+L+ +RGP++E
Sbjct: 541 TKTELQQTQMIVTTPEKWDVVTRKGAGDVA---FISLVKLLIIDEVHLLHG-ERGPVVEA 596
Query: 89 VVSKVLYLKKS----IQIFAMSATIGNINALSTFI-----EGITYVENS-RPTK-HSEYV 137
+V++ L L +S I+I +SAT+ N ++ F+ +G+ + ++ RP S ++
Sbjct: 597 LVARTLRLVESSQSMIRIVGLSATLPNYIDVARFLRVNPMKGLFFFDSRFRPVPLSSNFI 656
Query: 138 TVDKRVFQSFDGKSLTEIY-ADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLA 196
V K+L ++ DN+ Y D + +V+ V++F ++ A A
Sbjct: 657 GVKSL-------KALQQLSDMDNICY-------DRCIDMVRQGHQVMVFVHARNATVRTA 702
Query: 197 LRL-QFDRFPGTKEY----KKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTA 251
+ +F + G + E + I+A+ + + +L E G+A HHA +
Sbjct: 703 TIIKEFAQQKGHSQLLLPDSNPEYGNAIKAMSKSRNKQLV----ELFQNGLAMHHAGMLR 758
Query: 252 GERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIR-----DSYVGRDFISLNMYK-- 304
+R L+E+ + G ++++ CT+TLA GVNLPA VII+ DS G F+ L +
Sbjct: 759 QDRNLVEKYFSDGIIKVLVCTATLAWGVNLPAHAVIIKGTEIYDSKHG-TFVDLGILDVL 817
Query: 305 QMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAA 364
Q+ GRAGR +SG ++ T D L + PI S+ + +L EV
Sbjct: 818 QIFGRAGRPQFDKSGVGTII--TTHDKLNHYLSLLTNQFPIESNFIQCLVDNLNAEVTLG 875
Query: 365 NLCSSLEDVKTLIKHTLFYQLK-SPE---------DQQTFLETTLSEIV--ASLLASKGT 412
+ + E ++ L LF +++ +P+ ++ LE +++ A++ K
Sbjct: 876 TISNIDEAIEWLSYTYLFVRMRMNPQCYGLNYDDLNEDPTLERKRRQLINTAAMALDKAR 935
Query: 413 MLTMNE-AGHLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLN 454
M+ NE G +++T + + A + +D + ++++LL +N
Sbjct: 936 MVRYNERTGDMNVTDLGRTASHFYIKYD-TVEVFNELLKPIMN 977
>gi|443896874|dbj|GAC74217.1| RNA helicase BRR2 [Pseudozyma antarctica T-34]
Length = 2215
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 124/478 (25%), Positives = 215/478 (44%), Gaps = 76/478 (15%)
Query: 9 LAKAAEEFKFYLEEYA----GVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRID 64
+++ A F+ L+ Y + G TK Q+ + I + T EK + + +
Sbjct: 599 VSEQAANFRDRLQSYGITVNELTGDSQLTKAQIAETQIIVTTPEKWDVISRKSTDTSYTN 658
Query: 65 EIGLIVIDEFHMLNEPQRGPILECVVSKVL----YLKKSIQIFAMSATIGNINALSTFIE 120
+ L+++DE H+L++ RGP+LE ++S+ + + +++ +SAT+ N ++TF+
Sbjct: 659 LVRLLIVDEIHLLHD-DRGPVLEAIISRTIRRMEQMNDPVRLVGLSATLPNYQDVATFLR 717
Query: 121 -----GITYVE-NSRPTK-HSEYVTV-DKRVFQSFDGKSLTEI-YADNLDYSLTGSGPDA 171
G+ Y E N RP EYV + +K+ + + E+ Y LD +
Sbjct: 718 VNPKTGLFYFEANYRPCPLKQEYVGITEKKAIKRL--LVMNEVTYEKTLDQA-------- 767
Query: 172 VLHLVQGNLMVLIFCSSKIACSNLALRLQ--------FDRF-PGTKEYKKQEKEDLIEAL 222
G VLIF S+ + A ++ +RF P + + E L
Sbjct: 768 ------GKNQVLIFVHSRKETAKTAKFIRDRAMEQDTLNRFLPPSPASQ--------EVL 813
Query: 223 KEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLP 282
+ E D +L++ + YG HHA ++ +R L+E + G LQ++ T+TLA GVNLP
Sbjct: 814 RSELDNVTDGDLKDLMPYGFGIHHAGMSRLDRELVEALFADGHLQVLVSTATLAWGVNLP 873
Query: 283 AQRVIIRDSYV-----GR--DFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFS 335
A VII+ + + GR + +M QM+GRAGR GE I++ + +
Sbjct: 874 AHTVIIKGTQIYNPEKGRWCEITPQDML-QMLGRAGRPQYDTFGEGIIIT-NHSELQYYL 931
Query: 336 SMMNAGPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFY--QLKSP----- 388
S++N PI S + +L E+V + + E V L +T Y L+SP
Sbjct: 932 SLLNQQ-LPIESQLVSKLADNLNAEIVLGTIRNRDEAVAWL-GYTYLYVRMLRSPALYSV 989
Query: 389 ----EDQQTFLETTLSEIV---ASLLASKGTMLTMNEAGHLSLTSIAKAAVQAGLSHD 439
+ FLE ++IV A+LL G + +G+ + + A ++HD
Sbjct: 990 TADYAEDDPFLEQKRADIVHTAAALLEKCGLLRYERRSGNFVSNELGRIASHYYITHD 1047
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 75/344 (21%), Positives = 135/344 (39%), Gaps = 24/344 (6%)
Query: 6 YQSL-AKAAEEFKFYLEEYAGVK------GQYPPTKRQLNKKSIYICTIEKGSKLIGSLI 58
Y+S+ A E+K EY K G+ R L + + E L
Sbjct: 1435 YESMVAPRVAEWKTKFGEYQDGKEVVALTGETSADLRLLEMADVVVTIPEHWDVLSRRWR 1494
Query: 59 QENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLK----KSIQIFAMSATIGNINA 114
Q + + L + DE HM+ + + GP E V S+ ++ ++ A+S + N
Sbjct: 1495 QRKNVQSVALYIFDEIHMIGDWRVGPTYEIVASRARFVAAQTGSQTRMVALSVPLANARD 1554
Query: 115 LSTFIEGIT-YVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPD-AV 172
+ ++ + V N P+ + V + F S+ A ++ PD V
Sbjct: 1555 VGDWLGAPSGSVFNFAPSARQTPMEVHIQTFSMPHFPSMMIAMAKPAYLAIIEHAPDQPV 1614
Query: 173 LHLVQGNLMVLIFCSSKIA-CSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLS 231
+ V + + +A + R G + E EDL L+ D
Sbjct: 1615 IAFVPSRKQAKLTANDLLAYVLADSERDDSSSDDGESRFLNIEMEDLEPHLQRVQD---- 1670
Query: 232 TNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRD- 290
+L E + G+AY+H LT +RR++E + A ++++ + A + L A V+I
Sbjct: 1671 RDLRELLASGIAYYHEGLTKNDRRIVERLFAADAIRVVVASKETAWSIPLTAHLVLIMSL 1730
Query: 291 -SYVGRDF----ISLNMYKQMVGRAGRTGLQESGESIMLCKTMQ 329
+Y GR+ +L QMVGR + + ++LC+ +
Sbjct: 1731 QTYEGREHRYVDYALPDVLQMVGRCTVPNDEGTSRCVLLCQATR 1774
>gi|323451332|gb|EGB07209.1| hypothetical protein AURANDRAFT_58 [Aureococcus anophagefferens]
Length = 1555
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 106/377 (28%), Positives = 171/377 (45%), Gaps = 45/377 (11%)
Query: 33 TKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIG-------LIVIDEFHMLNEPQRGPI 85
+K+ + + + T EK + D +G L+++DE H+L E +RG +
Sbjct: 111 SKKDADAAHVLVVTPEKWDVVTRKQGGGGGGDSMGSLASRCRLLIVDEIHLLAE-ERGAV 169
Query: 86 LECVVSKVLYLKKSIQ----IFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDK 141
LECVV++ L +S Q + +SAT+ N + +F+ ++S E+ V
Sbjct: 170 LECVVARTTRLVESSQSQARLVGLSATLPNYEDVGSFL---GCADDSVFFFGPEFRPVPL 226
Query: 142 RVFQSFDGKSLTEIYA-----DNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIAC--SN 194
+ Q+F G + T+ + D+L + D L V +IF S+ +
Sbjct: 227 K--QTFVGVTETKRFQKLVKLDDLAF-------DVALSAVDRGHQAMIFVHSRRETFKTA 277
Query: 195 LALRLQFDRFPGTKEYKKQEK-EDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGE 253
+ALR + +R +K E +L++ L E G HHA + +
Sbjct: 278 MALRDRANRDGRDGAFKPAEDLGNLLKPFAPALAKCKHKELREAAEAGFGLHHAGMCRAD 337
Query: 254 RRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYV------GRDFISLNMYKQMV 307
R L E + AG ++++CCT+TLA GVNLPA VI + + V G +S+ Q+
Sbjct: 338 RSLSERMFAAGAVRVLCCTATLAWGVNLPAHAVICKGTDVYDPQRGGHVDLSMLDVLQIF 397
Query: 308 GRAGRTGLQESGESIMLC--KTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAAN 365
GRAGR + GE+ +L K + D+LR + A PI S + P L D I VAA
Sbjct: 398 GRAGRPQFDDFGEATLLTTQKALPDYLR--KLARAA--PIESCL-PARLADAINAEVAAG 452
Query: 366 LCSSLEDVKTLIKHTLF 382
+SL+D + HT
Sbjct: 453 TVASLKDAGRWLDHTFL 469
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 56/93 (60%), Gaps = 8/93 (8%)
Query: 234 LEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIR---- 289
L+ + +GV HHA L +R ++E+ + G ++++ CT+TLA GVN PA+ V+I+
Sbjct: 1197 LKHALPFGVGVHHAGLQERDRDVVEKLFERGAIRVLVCTATLAWGVNFPARLVVIKGTEF 1256
Query: 290 -DSYVGR--DFISLNMYKQMVGRAGRTGLQESG 319
D +G+ DF ++ QM+GRAGR + G
Sbjct: 1257 FDGKLGKYVDFPITDVL-QMMGRAGRPQFDDVG 1288
>gi|302792801|ref|XP_002978166.1| hypothetical protein SELMODRAFT_108064 [Selaginella moellendorffii]
gi|300154187|gb|EFJ20823.1| hypothetical protein SELMODRAFT_108064 [Selaginella moellendorffii]
Length = 2164
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 126/474 (26%), Positives = 220/474 (46%), Gaps = 61/474 (12%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V E +L K ++ ++E G + +++Q+ + I + T EK +
Sbjct: 565 LVAEMVGNLQKRLADYGVVVKELTGDQSL---SRQQIEETHIIVATPEKWDIITRKSGDR 621
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKS----IQIFAMSATIGNINALS 116
+ L++IDE H+L++ RGP+LE +V++ L ++ I++ +SAT+ N +S
Sbjct: 622 AYTQLVKLVIIDEIHLLHD-GRGPVLESIVARTLRQVETTHDMIRLVGLSATLPNYVDVS 680
Query: 117 TFIE-----GITYVENS-RPTKHSE-YVTVD-KRVFQSFDGKSLTEIYADNLDYSLTGSG 168
F+ G+ + +NS RP S+ YV + K+ Q F + + EI + +
Sbjct: 681 MFLRVDKSRGLFHFDNSFRPVPLSQQYVGISVKKPLQRF--QLMNEICYEKV-------- 730
Query: 169 PDAVLHLVQGNLMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLI--EALKEEN 226
V G +LIF S+ + A ++ D K K D E L+ E
Sbjct: 731 -----LAVAGKSQILIFVHSRKETAKTAKAIR-DSALTNDTLGKFLKGDSASSEILRTEA 784
Query: 227 DGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRV 286
+ +T+L+ + YG A HHA + +R L+EE + G +Q++ T+TLA GVNLPA V
Sbjct: 785 ENVKNTDLKGLLSYGFAIHHAGMARADRTLVEELFADGHIQVLVSTATLAWGVNLPAHTV 844
Query: 287 IIRDSYV------GRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNA 340
II+ + V +S QM+GRAGR +GE I++ + + S+MN
Sbjct: 845 IIKGTQVYNPEKGAWTELSPMDVMQMLGRAGRPQFDSTGEGIIIT-GHSELSYYLSLMNQ 903
Query: 341 GPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKTL---------IKHTLFYQLKSPEDQ 391
PI S +L E+V ++ ++ E L +++ L Y + +PE
Sbjct: 904 QL-PIESQFISKLPDNLNAEIVLGSVQNAREACAWLGYTYLYIRMLRNPLLYGV-NPEVL 961
Query: 392 QTFLETTLSEIVASLLASKGTMLTMN-------EAGHLSLTSIAKAAVQAGLSH 438
+T + TL E A L+ + T+L N ++G+ +T + + A +SH
Sbjct: 962 ET--DETLEERRADLIHTAATILDKNNLVKYDRKSGYFQVTDLGRIASHYYISH 1013
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 87/360 (24%), Positives = 165/360 (45%), Gaps = 35/360 (9%)
Query: 10 AKAAEEFKFYLEEYAGVK-------GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENR 62
A A E F+ + +++A +K G+ + L++ + I T E+ L Q +
Sbjct: 1404 ALAKERFEDWEKKFADLKVQVVQLTGETAMDLKLLDRGQVIISTPERWDVLSRRWKQRKQ 1463
Query: 63 IDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKS----IQIFAMSATIGNINALSTF 118
I ++ L ++DE H++ + GP+LE +VS++ Y+ K I+I A+SA++ N L +
Sbjct: 1464 IGQVNLFLVDELHLIG-GEGGPVLEVIVSRMRYISKQAGDKIRIVALSASLANAKDLGDW 1522
Query: 119 IEGITY-VENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQ 177
I ++ + N P + + G +T A ++T A+L +
Sbjct: 1523 IGASSHGLFNFSPAVRPVPLEI------HIQGVDITNFEARV--QAMTKPTFTAILQHAK 1574
Query: 178 GNLMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEEC 237
G L+F ++ + A L G + + ++DL L+ D L+E
Sbjct: 1575 GGKPALVFVPTRKHARSTASDLVLYALAGGNSFLQCTEKDLEPLLERIRD----PELKET 1630
Query: 238 ILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS--YVGR 295
+ GV Y H L+ E+ ++ E + AG +Q+ +S++ G+ L A +++ + Y GR
Sbjct: 1631 LQGGVGYLHEGLSPTEQDIVGELFSAGAIQVCVASSSMCWGMTLTAHLLVVMGTQYYDGR 1690
Query: 296 -----DFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMD 350
D+ ++ QM+GRA R + SG+ ++LC + + P P+ SH+D
Sbjct: 1691 ENAHTDYPITDLL-QMMGRASRPLVDSSGKCVILCHAPRK--EYYKKFLYEPFPVESHLD 1747
>gi|154333840|ref|XP_001563175.1| putative RNA helicase [Leishmania braziliensis MHOM/BR/75/M2904]
gi|134060187|emb|CAM45595.1| putative RNA helicase [Leishmania braziliensis MHOM/BR/75/M2904]
Length = 1986
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 102/372 (27%), Positives = 174/372 (46%), Gaps = 36/372 (9%)
Query: 33 TKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSK 92
TKR+L + + + T EK + E + ++ LI++DE H+LNE +RGP+LE +V++
Sbjct: 374 TKRELAETQVIVTTPEKWDVITRKQSNEELVSQVRLIIMDEIHLLNE-ERGPVLEALVAR 432
Query: 93 VLY-----LKKSIQIFAMSATIGNINALSTFI-----EGI-TYVENSRPTKHSEYVTVDK 141
L ++ I++ +SAT+ N ++ F+ EG+ + RP
Sbjct: 433 TLRHGELNPEQRIRLVGLSATLPNYKDVANFLQADLREGLKVFGPEYRPVP--------- 483
Query: 142 RVFQSFDG-KSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRLQ 200
+ Q+F G ++ + N ++ L + V+ V+ V++F S+ LA
Sbjct: 484 -LEQTFIGVQNASGPQKRNKEFELDRLAYEEVVKNVREGHQVMVFVHSRKQTIGLAKYFI 542
Query: 201 FDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEA 260
+ +E Q + + A+ ++ +L + G HHA L +R E
Sbjct: 543 EESKCRGEEQLFQYRGVMPSAIDKKGRTLQGRDLASLFIAGFGAHHAGLVRYDRTSTEGF 602
Query: 261 YLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYV------GRDFISLNMYKQMVGRAGRTG 314
+ G L+++CCTSTLA GVNLPA V+IR + + G IS+ Q+ GRAGR
Sbjct: 603 FRDGYLKVLCCTSTLAWGVNLPAHTVVIRGTQMYDPKRGGLVSISVLDVMQIFGRAGRPQ 662
Query: 315 LQESGESIMLC--KTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAANLCSSLED 372
SG I++ K + FLR + A PI S + L D + V A SS+ +
Sbjct: 663 FDTSGHGIIISDDKEVSHFLR----LIAHALPIESQLQ-GKLCDHLNAEVNAGTISSVME 717
Query: 373 VKTLIKHTLFYQ 384
+ +++T +Q
Sbjct: 718 ASSWLEYTYMWQ 729
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 110/412 (26%), Positives = 182/412 (44%), Gaps = 53/412 (12%)
Query: 26 VKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPI 85
+ G P L K I T EK + + + + + L+V DE HML RGPI
Sbjct: 1229 LSGDATPDISALAKADILCTTPEKWDGISRNWQVRSYVTAVKLVVFDEVHMLGT-DRGPI 1287
Query: 86 LECVVSKVLY----LKKSIQIFAMSATIGNINALSTF--IEGITYVENSRPTKHSEYVTV 139
LE +VS++ Y LK I++ +S + N LS++ +E V N P+ +TV
Sbjct: 1288 LEVIVSRMRYIGWSLKAPIRLVGLSTAVSNPGDLSSWLGVEKKWAVFNFDPSVRPVPMTV 1347
Query: 140 DKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSK-----IACSN 194
+ GK+ A ++ +A+ VL+F SS+ A +
Sbjct: 1348 H---IAGYHGKNYCPRMA-----TMNKPTYNAICE-KSPTQPVLVFVSSRRQTRLTAMAL 1398
Query: 195 LALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGER 254
+ L D T ++ + + + + +D ++ C+ +GV HHA L G+R
Sbjct: 1399 IGFLLMED---NTAKWVHMDVDQVQKYTSRLDD----PYVKHCLQFGVGIHHAGLLEGDR 1451
Query: 255 RLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIR---------DSYVGRDFISLNMYKQ 305
++EEA+L+ +Q++ TSTLA GVNLPA V+++ +SYV DF ++ Q
Sbjct: 1452 TIVEEAFLSNRIQVLVATSTLAWGVNLPAHMVVVKGTEYFDAKTNSYV--DFPITDVL-Q 1508
Query: 306 MVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAAN 365
M+GRAGR G + +LC + F P P+ S + V + E+V+
Sbjct: 1509 MIGRAGRPQFDTEGVAQVLCHEPKK--GFYRKFLYDPFPVESALHKQLHVHINAEIVSGT 1566
Query: 366 LCSSLEDVKTLIKHTLFYQLK-----------SPEDQQTFLETTLSEIVASL 406
+ + + V L LF ++ SP+ FL T + ++A L
Sbjct: 1567 INTRQDAVNYLTWTYLFRRIARNPSYYGLEDGSPKAVTIFLSTLVKGVLADL 1618
>gi|440802575|gb|ELR23504.1| DEAD box RNA helicase, putative [Acanthamoeba castellanii str. Neff]
Length = 2192
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 124/458 (27%), Positives = 214/458 (46%), Gaps = 56/458 (12%)
Query: 33 TKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSK 92
TK++L + + + T EK + + + L++IDE H+L+E RGP++E +V++
Sbjct: 573 TKKELTETQMIVTTPEKWDVITRKTSDVALVSLVRLLIIDEVHLLHE-DRGPVIETLVAR 631
Query: 93 VLYLKKS----IQIFAMSATIGNINALSTFIE-----GITYVENS-RPTKHS-EYVTVDK 141
L +S I+I +SAT+ N ++TF+ G+ + N+ RP S +Y+ V
Sbjct: 632 TLRQVESSQSMIRIVGLSATLPNYEDVATFLRVNTATGLFHFNNAYRPVPLSQQYIGVKT 691
Query: 142 RVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLA-LRLQ 200
+ + + + L Y A + QG+ V+IF S+ A + ++
Sbjct: 692 ------NDATRKKAIMNRLAYE------KAKESVEQGH-QVMIFVHSRQGTVKTAQVLME 738
Query: 201 FDRFPGTKEYKKQEKE-----DLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERR 255
R GT + + + +L+ LKE + + L+E G HHA + +R
Sbjct: 739 IAREKGTTALFQVDDDCTARYNLL--LKEVGKSR-NRELKELFACGFGMHHAGMLRADRN 795
Query: 256 LIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIR--DSYVGRD--FISLNMYK--QMVGR 309
L+E+ + G ++++CCT+TLA GVNLPA V+I+ D Y + F+ L M Q+ GR
Sbjct: 796 LVEKLFAEGYIRVLCCTATLAWGVNLPAHTVVIKGTDLYDSKKSAFVELGMLDVMQIFGR 855
Query: 310 AGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAANLCSS 369
AGR SGE I++ Q R+ S+MN PI S +L E+V+ + +
Sbjct: 856 AGRPQFDTSGEGIIITSHEQ-LPRYLSLMNHQ-LPIESQFVNNLADNLNAEIVSGTVTNM 913
Query: 370 LEDVKTLIKHTLFYQ-LKSP-----EDQQTFLETTLSEIVASLLASKGTMLT-------M 416
E V+ L LF + L++P QQ ++ L L+A+ L +
Sbjct: 914 DEAVEWLSYTYLFVRMLRNPLAYGITHQQKLMDPMLLNYRQQLVAAAAKTLDEAKMARWV 973
Query: 417 NEAGHLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLN 454
A L T + + A L HD ++++++ L L+
Sbjct: 974 PHANTLDPTHLGRTASHFYLLHD-TIVLFNEKLKASLS 1010
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 103/376 (27%), Positives = 166/376 (44%), Gaps = 38/376 (10%)
Query: 28 GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILE 87
G Y P L I + T EK + + + +GLIVIDE H+L + RGPILE
Sbjct: 1409 GDYTPDLHALQSADIVLTTPEKWDGISRNWQNRGYVKAVGLIVIDEVHLLGQ-DRGPILE 1467
Query: 88 CVVSKVLYL----KKSIQIFAMSATIGNINALSTF--IEGITYVENSRPTKHSEYVTVDK 141
+VS++ Y+ +++ +S + N L+ + IEG + N RP+ V ++
Sbjct: 1468 VIVSRMRYIASQTDNPVRLVCLSTAVANARDLADWLGIEGHEGLFNFRPSVRP--VPLEA 1525
Query: 142 RVFQSFDGKSLTEIYADNLDYSLTGSGPD-AVLHLVQGNLMVLIFCSSKIACSNLALRLQ 200
+ Q + G A T + P A + VLIF SS+ AL L
Sbjct: 1526 HI-QGYPGDHYCPRMA-------TMNKPTYAAIKAHSPAKPVLIFVSSRRQTRLTALDLI 1577
Query: 201 FDRFPGTKEYKKQEKEDLIEALKEENDGKLS-TNLEECILYGVAYHHADLTAGERRLIEE 259
F GT++ +Q + EA E +++ NL + +G+ HHA LT ++ ++EE
Sbjct: 1578 --AFLGTEDNPRQFLR-MPEAQLEPLLARVTDANLRHTLPFGIGLHHAGLTRDDKAVVEE 1634
Query: 260 AYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGRDFISLNMYK----------QMVGR 309
+ A +Q++ TSTLA GVNLPA V+I+ G +F + QM+GR
Sbjct: 1635 LFGANRIQVLISTSTLAWGVNLPAHLVVIK----GTEFFDPKTRRYLDFPITDVLQMMGR 1690
Query: 310 AGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAANLCSS 369
AGR +++++ + F P P+ S + E+V+ + S
Sbjct: 1691 AGRPQFDTYAKAVIMVHEPKK--NFYKKFLYEPFPVESSLHTVLHDHFNAEIVSGTIASK 1748
Query: 370 LEDVKTLIKHTLFYQL 385
+ V L F +L
Sbjct: 1749 QDAVDYLTWTYYFRRL 1764
>gi|440796186|gb|ELR17295.1| U5 small nuclear ribonucleoprotein helicase, putative [Acanthamoeba
castellanii str. Neff]
Length = 2227
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 122/473 (25%), Positives = 219/473 (46%), Gaps = 67/473 (14%)
Query: 9 LAKAAEEFKFYLEEYAGVK-----GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRI 63
+A+ +F LE Y G+K G TK Q+N+ + + T EK +
Sbjct: 575 VAEVVIDFTQRLEVY-GIKVRELSGDVNLTKAQINETQVIVTTPEKWDIITRKSGDRTYT 633
Query: 64 DEIGLIVIDEFHMLNEPQRGPILECVVSKVL----YLKKSIQIFAMSATIGNINALSTFI 119
+ LI+IDE H+L++ +RGP+LE +V++ + ++ I++ +SAT+ N ++ F+
Sbjct: 634 QLVRLIIIDEIHLLHD-ERGPVLESIVARTIRQVEQTQEMIRLVGLSATLPNYKDVAVFL 692
Query: 120 E-----GITYVENS-RPTK-HSEYVTV-DKRVFQSFDGKSLTEIYADNLDYSLTGSGPDA 171
G+ +NS RP Y+ + +++ + F + + EI + +
Sbjct: 693 RVDLDRGLFTFDNSYRPVPLEQTYIGITERKALKRF--QLMNEITYEKVMKQ-------- 742
Query: 172 VLHLVQGNLMVLIFCSSKIACSNLA-----LRLQFDRFPGTKEYKKQEKEDLIEALKEEN 226
G VL+F S+ A + L D E ++ +E L +E
Sbjct: 743 -----AGEHQVLVFVHSRKETGKTARAIRDMALANDTIGRFLEERQASREILQSEAEEST 797
Query: 227 DGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRV 286
K L++ + YG A HHA +T +R L+E+ ++ G +Q++ T+TLA GVNLPA+ V
Sbjct: 798 KNK---ELQDLLPYGFAIHHAGMTRSDRTLVEDLFVDGHIQVLVSTATLAWGVNLPARTV 854
Query: 287 IIRDSYV-----GRDFISLNMYK--QMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMN 339
II+ + + GR ++ L+ QM+GRAGR + G+ I++ + + + S++N
Sbjct: 855 IIKGTQIYNPEKGR-WVELSPLDVMQMIGRAGRPRYDKLGQGIVIT-SHGELQYYLSLLN 912
Query: 340 AGPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFY--QLKSPE-------- 389
PI S +L E+V + ++ E V L +T Y L+SP
Sbjct: 913 HQ-LPIESQFIGQLADNLNAEIVLGTVQNAREAVNWL-GYTYLYICMLRSPNLYGISWEE 970
Query: 390 -DQQTFLETTLSEIV---ASLLASKGTMLTMNEAGHLSLTSIAKAAVQAGLSH 438
D+ FLE +++V A++L + + G +T + + A +SH
Sbjct: 971 ADEDKFLEQRRADLVHTAATVLDRANLIKYDRKTGAFQVTDLGRVASHFYVSH 1023
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 59/128 (46%), Gaps = 11/128 (8%)
Query: 231 STNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGV-NLPAQRVIIR 289
S +L+E + G+ H L ER+++E + +G +Q++ T + + + A V+I
Sbjct: 1678 SKSLKEALQSGIGLFHGQLEPIERKVVETLFSSGAIQVVIATHDMCWSMGGMAAHLVVIM 1737
Query: 290 DS--YVGR-----DFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGP 342
+ + GR D+ ++ QM+GRA R + +LC + F P
Sbjct: 1738 GTSYFEGREHRYADYPITDLL-QMIGRAHRPAGAGHAVAAVLCHAAKK--DFYKKFLFEP 1794
Query: 343 EPISSHMD 350
P+ SH+D
Sbjct: 1795 LPVESHLD 1802
>gi|240280527|gb|EER44031.1| helicase family member [Ajellomyces capsulatus H143]
Length = 1510
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 98/372 (26%), Positives = 164/372 (44%), Gaps = 53/372 (14%)
Query: 35 RQLNKKSIYICTIEKGSKLIGSLIQENRIDE-IGLIVIDEFHMLNEPQRGPILECVVSKV 93
R + +I I T EK + ++ + + L +IDE H+L E RG LE VVS++
Sbjct: 321 RNVQNANIIITTPEKWDSMTRKWKDHIKLMQLVKLFLIDEVHILKE-TRGATLEAVVSRM 379
Query: 94 LYLKKSIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSFDGKSLT 153
+++ A+SAT+ N + ++ PT ++++ + F G+
Sbjct: 380 KSADSNVRFVALSATVPNSEDIGAWL-------GKDPT--NQHLPAHRERF----GEEFR 426
Query: 154 EIYADNLDYSLTGSGPD------------AVLHLVQGNLMVLIFC---SSKIACSNLALR 198
+ Y +G D VL +IFC +S IA S +
Sbjct: 427 PVKLQKFVYGYHSNGNDFAFDKACEARLPGVLEKHSKKKPTMIFCCTRNSAIATSKYLAK 486
Query: 199 LQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIE 258
L P + + + ++ + L I GVA+HHA L A +R +E
Sbjct: 487 LWTSTNPPNRLWNGPTRPVAVQ----------NPELRATISAGVAFHHAGLDACDRHAVE 536
Query: 259 EAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGRD-----FISLNMYKQMVGRAGRT 313
+L+G + +ICCTSTLA GVNLP VII+++ +D + L M QM+GRAGR
Sbjct: 537 NGFLSGQINVICCTSTLAVGVNLPCYLVIIKNTVSWQDNCCKEYPDLEMM-QMLGRAGRP 595
Query: 314 GLQESGESIMLCKTMQDFLRFSSMMNAGPEPISS--HMDPPTLVDLILEVVAANLCSSLE 371
+S +++L T ++ L + + AG EP+ S H+ L+D + + + +E
Sbjct: 596 QFDDSAVAVIL--TRKERLDYYEKLVAGTEPLESCLHL---KLIDHLNSEIGLGTVTDVE 650
Query: 372 DVKTLIKHTLFY 383
+ T F+
Sbjct: 651 SATRWLAGTFFF 662
>gi|401405054|ref|XP_003881977.1| hypothetical protein NCLIV_017360 [Neospora caninum Liverpool]
gi|325116391|emb|CBZ51944.1| hypothetical protein NCLIV_017360 [Neospora caninum Liverpool]
Length = 3989
Score = 111 bits (278), Expect = 1e-21, Method: Composition-based stats.
Identities = 91/320 (28%), Positives = 135/320 (42%), Gaps = 102/320 (31%)
Query: 100 IQIFAMSATIGNINALSTFIEGITYVEN--------------------------SRPTKH 133
+QI MSAT+GN++ ++ ++ G+++V + SRP+
Sbjct: 595 VQIVGMSATLGNLDEVARWLSGVSFVSSHRPLPLREFYFCWDKSDPECLLLEKASRPSAS 654
Query: 134 SEYVTV-----DKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAV---------------- 172
+ V +K + S D + A ++GSG A
Sbjct: 655 PAWAAVPFPSEEKALLLSQDEEGSPPTVASA---PISGSGSCASRSSRRGPRDSPQFPPR 711
Query: 173 ---------LHLVQGNLMVLIFCSSKIACSN----LALRLQF------------------ 201
LH V+ VL+FC +K+ C LA RL+
Sbjct: 712 HAGALLSLSLHRVRRGDSVLVFCPTKVICEKVSAFLAPRLEAPIASSFSPSVSTPAALSP 771
Query: 202 ------------------DRFPGTKEYKKQEKEDLIEALKEENDGK--LSTNLEECILYG 241
D G +E + + L+ L G LS L C L G
Sbjct: 772 SSPSSSPSSSSSFYSSFADSAEGVRE-ARSLRAVLLSRLAASEGGSFSLSPALASCFLAG 830
Query: 242 VAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGRDFISLN 301
VA+HH+ LT+ ERR +E+AY G L ++C TSTLAAGVNLPA+RVI ++GR+F++
Sbjct: 831 VAFHHSGLTSFERRAVEKAYRDGLLLVLCATSTLAAGVNLPAKRVIFFSPFIGRNFLAAG 890
Query: 302 MYKQMVGRAGRTGLQESGES 321
YKQM GRAGR G +S ++
Sbjct: 891 EYKQMAGRAGRVGALKSRDA 910
Score = 58.5 bits (140), Expect = 1e-05, Method: Composition-based stats.
Identities = 34/95 (35%), Positives = 54/95 (56%), Gaps = 4/95 (4%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V E++ L A L+ A G P + + +CTIEK + LI +L++E
Sbjct: 417 LVEEQFSKLQALASASPSPLKVVAFHHGSPTPLTEAFD---VALCTIEKANALIQALLEE 473
Query: 61 NRIDE-IGLIVIDEFHMLNEPQRGPILECVVSKVL 94
N + E IG++V+DE HM+ + QRG +LE +SK+L
Sbjct: 474 NALAEKIGIVVVDELHMVGDAQRGFLLEVFLSKLL 508
>gi|219121764|ref|XP_002181230.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217407216|gb|EEC47153.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 2189
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 126/484 (26%), Positives = 234/484 (48%), Gaps = 65/484 (13%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V E ++ ++ E++ + E +G +++Q+++ + + T EK +
Sbjct: 581 LVQEVVKNFSERLEDYGVTVRELSGDSSL---SRQQISETQLLVTTPEKWDVVTRQGEGR 637
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLY----LKKSIQIFAMSATIGNINALS 116
+ L+++DE H+L++ +RGP+LE +V++++ + +++ +SAT+ N ++
Sbjct: 638 AFTQLVKLVIVDEIHLLHD-ERGPVLESIVARIIRQVETTSEPVRLVGLSATLPNYTDVA 696
Query: 117 TFI-----EGITYVENS-RPTK-HSEYVTVDKR-VFQSFDGKSLTEIYADNLDYSLTGSG 168
TF+ +G+ + ++S RP +Y+ + +R F+ F ++ EI +
Sbjct: 697 TFLRVDHNKGLFFFDHSYRPVPLQMQYIGLTERNAFRRFQLQN--EICYEK--------- 745
Query: 169 PDAVLHLVQGNLMVLIFCSSKIACSNLA--LR-LQFDRFPGTKEYKKQEKEDLIEALKEE 225
A+ GN M LIF S+ A LR L +R T + EK E L+EE
Sbjct: 746 --AIEQRRNGNQM-LIFVHSRAETGKTAKALRDLALERDESTNFVR--EKGATQEILREE 800
Query: 226 NDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQR 285
+ + +L++ + YG A HHA + +R L+E+ + + ++ CT+TLA GVNLPA
Sbjct: 801 SSAVKNADLKDVLPYGFAIHHAGMAREDRELVEDLFADRHIAVLVCTATLAWGVNLPAHA 860
Query: 286 VIIR-----DSYVGR--DFISLNMYKQMVGRAGRTGLQESGESIMLCK--TMQDFLRFSS 336
VII+ D GR + L++ QM+GRAGR GE I+L + +Q +L ++
Sbjct: 861 VIIKGTQIYDPSKGRWAELSPLDVL-QMLGRAGRPQYDSEGEGIILTQHSELQYYLSLTN 919
Query: 337 MMNAGPEPISSHMDPPTLVD-LILEVVAANLCSSLEDVKTLIKHTLFYQ-LKSPE----D 390
+ P+ S + TL D L E+V + + E V L LF + L++P
Sbjct: 920 LQ----LPVESQL-IKTLPDHLNAEIVLGTIQTISEAVDWLGYTFLFVRMLQNPNLYGIS 974
Query: 391 QQTFLET--------TLSEIVASLLASKGTMLTMNEAGHLSLTSIAKAAVQAGLSHDVCL 442
+ +FL+ L+ AS+L + ++G L T + + + Q +SH +
Sbjct: 975 ETSFLDDRTLKKRRLDLAHSAASILEKSHLVRYDRKSGALQATPLGRISSQFYISHS-SM 1033
Query: 443 IIYS 446
+YS
Sbjct: 1034 AVYS 1037
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 90/430 (20%), Positives = 181/430 (42%), Gaps = 55/430 (12%)
Query: 26 VKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPI 85
+ G+ P + L++ + + + ++ + Q + + L++ DE H L GP
Sbjct: 1443 LSGETGPDLKLLSQGKVVVSSAKQWDMVSRRWKQRKAVQNVALMIFDELHFLGGII-GPT 1501
Query: 86 LECVVSKVLYL---------KKSIQIFAMSATIGNINALSTFIEGIT------YVENSRP 130
LE V+S+ Y+ +++I +SA++ N + ++ G++ + +RP
Sbjct: 1502 LEVVISRTRYMIGQSEDGKTVANMRIVGLSASLANARDVGEWM-GVSGKSLFNFSSKARP 1560
Query: 131 TKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKI 190
+ FQSF+ + Y+ L H+ +G ++F S+
Sbjct: 1561 MPLEIF-------FQSFEQAN----YSARLMAMAKPVFSAVERHIGEGT--AIVFTPSRR 1607
Query: 191 ACSNLALRLQ-FDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADL 249
A+ L F G Y + + L L E L++ + G+ + HA +
Sbjct: 1608 QAQLTAIDLMTFRDGQGLGSYVGKSVDTL--TLAEIASTLREPALQQVVTNGIGFLHAGM 1665
Query: 250 TAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS--YVGRDFISLNM-YKQM 306
+ + + Y +G L+I+ C + + + + VII + Y GR+ L+ +
Sbjct: 1666 IDSDWNTVVDLYNSGALRILVCPTDVCWKIRCVGRLVIIMGTEVYDGREGRHLDYPVMDI 1725
Query: 307 VGRAGRTGLQESGESIMLCKT-MQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAAN 365
+ GR + SG+ ++LC +D+L+ + P PI SH+D L EVV
Sbjct: 1726 LHMIGRHDPRSSGKCVLLCHAPKKDYLK---KLIYDPVPIESHLDSYLHDPLNAEVVTKT 1782
Query: 366 LCSSLEDV----------KTLIKHTLFYQLKSPEDQQTFLETTLSEIVASLLAS--KGTM 413
+ SS++D + L ++ +Y L+ + FL LSE++ +++ +
Sbjct: 1783 V-SSMQDAIDYLTWSFLYRRLPQNPTYYGLRGTSN--VFLSEYLSEMIETVIGDLEESKC 1839
Query: 414 LTMNEAGHLS 423
+M+E G +S
Sbjct: 1840 CSMSEEGDIS 1849
>gi|325096404|gb|EGC49714.1| helicase family member [Ajellomyces capsulatus H88]
Length = 1510
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 98/372 (26%), Positives = 164/372 (44%), Gaps = 53/372 (14%)
Query: 35 RQLNKKSIYICTIEKGSKLIGSLIQENRIDE-IGLIVIDEFHMLNEPQRGPILECVVSKV 93
R + +I I T EK + ++ + + L +IDE H+L E RG LE VVS++
Sbjct: 321 RNVQNANIIITTPEKWDSMTRKWKDHIKLMQLVKLFLIDEVHILKE-TRGATLEAVVSRM 379
Query: 94 LYLKKSIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSFDGKSLT 153
+++ A+SAT+ N + ++ PT ++++ + F G+
Sbjct: 380 KSADSNVRFVALSATVPNSEDIGAWL-------GKDPT--NQHLPAHRERF----GEEFR 426
Query: 154 EIYADNLDYSLTGSGPD------------AVLHLVQGNLMVLIFC---SSKIACSNLALR 198
+ Y +G D VL +IFC +S IA S +
Sbjct: 427 PVKLQKFVYGYHSNGNDFAFDKACEARLPGVLEKHSKKKPTMIFCCTRNSAIATSKYLAK 486
Query: 199 LQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIE 258
L P + + + ++ + L I GVA+HHA L A +R +E
Sbjct: 487 LWTSTNPPNRLWNGPTRPVAVQ----------NPELRATISAGVAFHHAGLDACDRHAVE 536
Query: 259 EAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGRD-----FISLNMYKQMVGRAGRT 313
+L+G + +ICCTSTLA GVNLP VII+++ +D + L M QM+GRAGR
Sbjct: 537 NGFLSGQINVICCTSTLAVGVNLPCYLVIIKNTVSWQDNCCKEYPDLEMM-QMLGRAGRP 595
Query: 314 GLQESGESIMLCKTMQDFLRFSSMMNAGPEPISS--HMDPPTLVDLILEVVAANLCSSLE 371
+S +++L T ++ L + + AG EP+ S H+ L+D + + + +E
Sbjct: 596 QFDDSAVAVIL--TRKERLDYYEKLVAGTEPLESCLHL---KLIDHLNSEIGLGTVTDVE 650
Query: 372 DVKTLIKHTLFY 383
+ T F+
Sbjct: 651 SATRWLAGTFFF 662
>gi|388852394|emb|CCF54009.1| probable RNA helicase [Ustilago hordei]
Length = 1955
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 107/385 (27%), Positives = 185/385 (48%), Gaps = 56/385 (14%)
Query: 33 TKRQLNKKSIYICTIEKGSKLIGSLIQENRI-DEIGLIVIDEFHMLNEPQRGPILECVVS 91
T++++ + + + T EK + E + ++ L++IDE H+L++ +RG ++E +V+
Sbjct: 492 TRQEIAETQMIVTTPEKWDVVTRKPTGEGELATKVRLLIIDEVHLLHD-ERGSVIETIVA 550
Query: 92 KVLYLKKS----IQIFAMSATIGNINALSTFI-----EGITYVENS-RPTKHSEYVTVDK 141
+ L L +S I+I +SAT+ N ++ F+ +G+ Y ++S RP ++
Sbjct: 551 RTLRLVESSQSLIRIVGLSATLPNYVDVADFLRVNRWQGLFYFDSSFRPVPLEQH----- 605
Query: 142 RVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRLQF 201
F GK+ ++ NLD + + V LVQ V++F ++ A L
Sbjct: 606 --FLGVKGKAGSQQSRANLDKACF----EKVSELVQAGHQVMVFVHARKETVITAQTL-- 657
Query: 202 DRFPGTKEYKKQEK-EDLIEALKEENDGKL----------STNLEECILYGVAYHHADLT 250
+E +QE D+++A +EN K + ++E YG HHA +
Sbjct: 658 ------REMLRQEAMSDILQAAADENPKKAFFKKELQSSRNREMKELFDYGFGIHHAGML 711
Query: 251 AGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIR-----DSYVGRDFISLNMYK- 304
+R L E + AG +++CCT+TLA GVNLPA V+I+ DS G+ F+ L++
Sbjct: 712 RSDRTLSERMFEAGVTRVLCCTATLAWGVNLPAYAVVIKGTDVYDSSAGK-FVDLSILDV 770
Query: 305 -QMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNA--GPEPISSHMDPPTLVDLILEV 361
Q+ GRAGR ++ G +L T QD R S ++A PI S + L E+
Sbjct: 771 LQIFGRAGRPQYEDLGVGYIL--TSQD--RLSHYVDAITSQHPIESKFIGGLIDSLNAEI 826
Query: 362 VAANLCSSLEDVKTLIKHTLFYQLK 386
+ S + V L LF ++K
Sbjct: 827 SLGTVASVRDGVSWLGYTYLFTRMK 851
>gi|346321027|gb|EGX90627.1| pre-mRNA splicing helicase [Cordyceps militaris CM01]
Length = 2198
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 106/412 (25%), Positives = 197/412 (47%), Gaps = 47/412 (11%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V E+ + K E + + E G + TK Q+ + I + T EK +
Sbjct: 587 LVQEQVGNFGKRLEPYGIRVSELTGDRQL---TKAQIAETQIIVTTPEKWDVITRKANDL 643
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVL----YLKKSIQIFAMSATIGNINALS 116
+ + + L++IDE H+L++ RGP+LE +VS+ + + +++ +SAT+ N ++
Sbjct: 644 SYTNLVRLVIIDEIHLLHD-DRGPVLESIVSRTIRKTEQTGEPVRLVGLSATLPNYRDVA 702
Query: 117 TFIE-----GITYVENS-RPTK-HSEYVTV-DKRVFQSFDGKSLTEIYADNLDYSLTGSG 168
+F+ G+ + + S RP E++ V D++ + K++ ++ + +
Sbjct: 703 SFLRVNIDSGLFHFDGSFRPCPLRQEFIGVTDRKAIKQL--KTMNDVTYNKV-------- 752
Query: 169 PDAVLHLVQGNLMVLIFCSSKIACSNLA--LR---LQFDRFPGTKEYKKQEKEDLIEALK 223
+ H+ Q VLIF S+ + A +R ++ D + +E L EA
Sbjct: 753 ---LEHVGQNRNQVLIFVHSRKETAKTARYIRDKAMEMDTINQILRHDAGSREVLQEAAG 809
Query: 224 EENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPA 283
+ D +L++ + +G HHA + +R +E+ + G +Q++ CT+TLA GVNLPA
Sbjct: 810 QATD----KDLKDILPHGFGIHHAGMNRIDRTDVEDLFARGAIQVLVCTATLAWGVNLPA 865
Query: 284 QRVIIRDSYV----GRDFISLNMYK--QMVGRAGRTGLQESGESIMLCKTMQDFLRFSSM 337
VII+ + + ++ L+ QM+GRAGR GE I++ T + + S+
Sbjct: 866 HTVIIKGTQIYSPEKGTWVELSPQDVLQMLGRAGRPQFDTYGEGIIIT-TQTEIQYYLSL 924
Query: 338 MNAGPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQ-LKSP 388
+N PI S + +L E+V N+ + E V+ L LF + L+SP
Sbjct: 925 LNQQ-LPIESQFVSKLVDNLNAEIVLGNVRTRDEGVEWLGYTYLFVRMLRSP 975
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 73/384 (19%), Positives = 160/384 (41%), Gaps = 44/384 (11%)
Query: 21 EEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEP 80
+E + G+ + L + + + T + L + + + L + D+ H+L
Sbjct: 1447 KEIVKLTGETATDLKMLEQGDLILATPTQWDVLSRQWKRRKNVQSVQLFIADDVHLLGGS 1506
Query: 81 QRGPILECVVSKVLYLKKS----IQIFAMSATIGNINALSTFIEGITY-VENSRPTKHSE 135
Q G I E +VS++ Y++ ++I A+S ++ N + +I+ + + N P H
Sbjct: 1507 Q-GYIYEIIVSRMHYIRTQTELPLRIVALSVSLANARDIGEWIDAKKHDIYNFSP--HVR 1563
Query: 136 YVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNL 195
V ++ + Q+F +L ++ +A+ + + ++F ++ +
Sbjct: 1564 PVPLELHI-QAFSNPHFP-----SLMLAMAKPTYNAITQM-SADKPAMVFVPNRKQTRST 1616
Query: 196 ALRL--------QFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHA 247
A L DRF + + L++ + EE L E + +G+ Y+H
Sbjct: 1617 ARDLLAACVTDEDEDRF---LHVDADQMKPLLDRVHEEA-------LAEALSHGIGYYHE 1666
Query: 248 DLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS--YVGRDF----ISLN 301
L+ ++R+++ + G +Q++ + + + A VI+ + + GR+ L+
Sbjct: 1667 ALSQSDKRIVKHLFDKGAVQVLVASREVCWELTSVAHLVIVMGTQYFEGREHRYVDYPLS 1726
Query: 302 MYKQMVGRAGRTGLQESGESI-MLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILE 360
QM G+A R G + ML + +D+ + + P+ SH++ L D +
Sbjct: 1727 EVLQMFGKALRPSKDGRGRGVLMLPQVKRDY--YKKFLGEA-LPVESHLN-NYLHDAFVT 1782
Query: 361 VVAANLCSSLEDVKTLIKHTLFYQ 384
++ + S ED T FY+
Sbjct: 1783 EISTKMIESGEDAINWTTFTYFYR 1806
>gi|392862389|gb|EAS36968.2| pre-mRNA splicing helicase [Coccidioides immitis RS]
Length = 2213
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 123/475 (25%), Positives = 221/475 (46%), Gaps = 54/475 (11%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V E+ + K E + + E G + TK+Q+ + + + T EK +
Sbjct: 605 LVQEQVGNFGKRLEPYGIKVSELTGDRQL---TKQQIAETQVIVTTPEKWDIVTRKATDT 661
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKS----IQIFAMSATIGNINALS 116
+ + L++IDE H+L++ RGP+LE +VS+ + + +++ +SAT+ N +
Sbjct: 662 SYTRLVRLVIIDEIHLLHD-DRGPVLESIVSRTIRRTEQTGDPVRLVGLSATLPNYRDVG 720
Query: 117 TF-----IEGITYVENS-RPTK-HSEYVTV-DKRVFQSFDGKSLTEIYADNLDYSLTGSG 168
+F I G+ + + S RP E++ V +K+ + K++ ++ +
Sbjct: 721 SFLRVDPISGLFHFDGSYRPCPLKQEFIGVTEKKAIKQL--KTMNDVCYNK--------- 769
Query: 169 PDAVLHLVQGNL-MVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEA--LKEE 225
VL V N +LIF S+ + A R D+ + + + D L EE
Sbjct: 770 ---VLEQVGTNKNQMLIFVHSRKDTAKTA-RYIRDKAVEMETIGQILRSDAASRAILAEE 825
Query: 226 NDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQR 285
+ +L++ + YG HHA ++ +R +E+ + G+LQ++ CT+TLA GVNLPA
Sbjct: 826 AESVNDPSLKDLMPYGFGIHHAGMSKVDRTSVEDLFADGSLQVLVCTATLAWGVNLPAHT 885
Query: 286 VIIRDSYV----GRDFISLNMYK--QMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMN 339
VII+ + V ++ L+ QM+GRAGR GE I++ T + + S++N
Sbjct: 886 VIIKGTQVYSPEKGSWVELSPQDVLQMLGRAGRPQYDSFGEGIIIT-TQGELQYYLSLLN 944
Query: 340 AGPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQ-LKSPE--------D 390
PI S + +L EVV N+ S E V+ L LF + L+SP +
Sbjct: 945 QQ-LPIESQLMSKLADNLNAEVVLGNVRSRDEGVEWLGYTYLFVRMLRSPGLYSVGADYE 1003
Query: 391 QQTFLETTLSEIV---ASLLASKGTMLTMNEAGHLSLTSIAKAAVQAGLSHDVCL 442
LE ++V A++L + G + ++G L T + + A ++H+ L
Sbjct: 1004 GDAALEQRRVDLVHSAATVLGNAGLVKYDKQSGKLQSTELGRIASHYYITHNSML 1058
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 76/353 (21%), Positives = 159/353 (45%), Gaps = 45/353 (12%)
Query: 53 LIGSLIQENR-IDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYL----KKSIQIFAMSA 107
++ L Q + + + L++ DE HML Q G + E VVS++ Y+ + +++I +S
Sbjct: 1496 VVSRLWQRRKNVQAVELLIADELHMLGG-QGGYVYEVVVSRMHYIALQTESNLRIVGLSV 1554
Query: 108 TIGNINALSTFIEGITY-VENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTG 166
+ N L ++ + + N P H+ V ++ + +S T + +L ++
Sbjct: 1555 PLSNARDLGEWLGAKKHTIYNFSP--HARPVPLELHL------QSFTIPHFPSLMLAMAR 1606
Query: 167 SGPDAVLHLVQGNLMVLIFCSSKIACSNLALRL--------QFDRFPGTKEYKKQEKEDL 218
++L L L+F ++ + AL L DRF T+ ++ L
Sbjct: 1607 PAYSSILQLSPSK-PALVFVPTRKQTRSTALDLVAACIADDAEDRFLHTE---IEQIAPL 1662
Query: 219 IEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAG 278
+E + E L E + +G+ Y+H L+ ++R++ + G +Q++ + +
Sbjct: 1663 LERIDERA-------LAESLSHGIGYYHEALSKSDKRIVSHLFNIGAIQVMLASRDVCWE 1715
Query: 279 VNLPAQRVIIRDS--YVGRD--FISLNMYK--QMVGRAGRTGLQESGESIMLCKTM-QDF 331
+ A VII ++ + GR+ +I + + QM GRA R SG+ +++ + +D+
Sbjct: 1716 IEFTAHLVIIMNTQFFDGREHRYIDYPVSEILQMFGRASRPLDDRSGKGVLMVPAVRRDY 1775
Query: 332 LRFSSMMNAGPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQ 384
+ +N P+ SH+ L D + ++ +S +D + +T FY+
Sbjct: 1776 --YKKFLNEA-LPMESHLQ-IYLHDAFVTEISTKTITSTQDAVDWMTYTYFYR 1824
>gi|347965554|ref|XP_321922.5| AGAP001234-PA [Anopheles gambiae str. PEST]
gi|333470458|gb|EAA01788.6| AGAP001234-PA [Anopheles gambiae str. PEST]
Length = 2181
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 125/475 (26%), Positives = 219/475 (46%), Gaps = 55/475 (11%)
Query: 14 EEFKFYLEEYAGVK-----GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGL 68
+++K +E+ G K G P R + + S+ + T EK + S + + ++ L
Sbjct: 1392 DDWKVRIEQKLGKKVVELTGDVTPDIRAIKESSVIVTTPEKWDGISRSWQTRDYVRDVAL 1451
Query: 69 IVIDEFHMLNEPQRGPILECVVSKVLYLK----KSIQIFAMSATIGNINALSTFIEGITY 124
IVIDE H+L E RGP+LE +VS++ ++ ++++I +S + N L+ ++ GI
Sbjct: 1452 IVIDEIHLLGE-DRGPVLEVIVSRMNFISSHTDRTVRIVGLSTALANARDLANWL-GIET 1509
Query: 125 VE--NSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPD-AVLHLVQGNLM 181
+ N +P+ ++V Q F GK A T + P +
Sbjct: 1510 MGLYNFKPSVRPVPLSVH---IQGFPGKHYCPRMA-------TMNRPAFQAIRQYSPCTP 1559
Query: 182 VLIFCSSKIACSNLALRLQFDRFPGTKEYKKQ----EKEDLIEALKEENDGKLSTNLEEC 237
LIF +S+ AL L F +++ KQ +E++ + L+ D +NL
Sbjct: 1560 ALIFVASRRQTRLTALDLI--SFLASEDNSKQFLHTSEEEMEQILQNVRD----SNLRLT 1613
Query: 238 ILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS--YVG- 294
+ +G+ HHA L +R+ EE +L +QI+ T+TLA GVNLPA VII+ + Y G
Sbjct: 1614 LAFGIGMHHAGLHERDRKTAEELFLNRKIQILIATATLAWGVNLPAHLVIIKGTEYYDGK 1673
Query: 295 -RDFISLNMYK--QMVGRAGRTGLQESGESIMLCKTMQDFLR-FSSMMNAGPEPISSHMD 350
+ ++ + + QM+GRAGR G + C +QD + F P P+ S +
Sbjct: 1674 LKRYVDMPITDVLQMMGRAGRPQFGNEG---IACVYVQDTKKNFYKKFLYDPFPVESSLL 1730
Query: 351 PPTLVDLILEVVAANLCS--SLEDVKT-------LIKHTLFYQLKSPE-DQQTFLETTLS 400
+ E+VA L + S+ D T L+++ +Y L + E + + + L
Sbjct: 1731 AVLPDHVNAEIVAGTLRTKQSILDYLTWTYFYRRLLRNPTYYGLDTTEMENVNYFLSELI 1790
Query: 401 EIVASLLASKGTMLTMNEAGHLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKLNF 455
E V L G +L + L TS+ + + LSH + + ++D L + ++
Sbjct: 1791 ETVLDKLIRAGCVLLEEDNRSLMATSMGRISSYYYLSH-ITMRHFADTLRHDMSM 1844
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 111/452 (24%), Positives = 206/452 (45%), Gaps = 74/452 (16%)
Query: 33 TKRQLNKKSIYICTIEKGS----KLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILEC 88
TK +L + + + T EK K G + I + L++IDE H+L+ +RGP++E
Sbjct: 573 TKAELQQTQMIVTTPEKWDVVTRKGAGDVA---FISLVKLLIIDEVHLLHG-ERGPVVEA 628
Query: 89 VVSKVLYLKKS----IQIFAMSATIGNINALSTFIE-----GITYVENS-RPTKHS-EYV 137
+V++ L L +S I+I +SAT+ N ++ F+ G+ + ++ RP S ++
Sbjct: 629 LVARTLRLVESSQSMIRIVGLSATLPNYIDVARFLRVNPMIGLFFFDSRFRPVPLSTNFI 688
Query: 138 TVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLAL 197
V + + K ++++ D + Y + + +V+ V++F ++ A A
Sbjct: 689 GV--KALNAL--KQMSDM--DTICY-------ERCIDMVRQGHQVMVFVHARNATVRTAT 735
Query: 198 RLQFDRFPGTKEYKKQE----------KEDLIEALKEENDGKLSTNLEECILYGVAYHHA 247
+ K+ +Q D ALK + + + L + G+A HHA
Sbjct: 736 LI--------KDLAQQRGHINLLVPESSPDYGSALKVVSKSR-NKQLVDLFQNGLAMHHA 786
Query: 248 DLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIR-----DSYVGRDFISLNM 302
+ +R L+E+ + G ++++ CT+TLA GVNLPA VII+ DS G F+ L +
Sbjct: 787 GMLRQDRNLVEKYFADGLIKVLVCTATLAWGVNLPAHAVIIKGTEIYDSKHG-TFVDLGI 845
Query: 303 YK--QMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILE 360
Q+ GRAGR +SG ++ T D L + PI S+ + +L E
Sbjct: 846 LDVLQIFGRAGRPQYDKSGVGTII--TTHDKLNHYLSLLTNQFPIESNFIQCLVDNLNAE 903
Query: 361 VVAANLCSSLEDVKTLIKHTLFYQLK-SPE---------DQQTFLETTLSEIV--ASLLA 408
V + + E + L LF +++ +P+ + LE +++ A++
Sbjct: 904 VTLGTISNVDEAIVWLSYTYLFVRMRMNPQCYGLNYDDLREDPSLEVKRRQLIHTAAMAL 963
Query: 409 SKGTMLTMNE-AGHLSLTSIAKAAVQAGLSHD 439
K M+ N+ G L++T + + A + +D
Sbjct: 964 DKARMVRYNDRTGDLNVTDLGRTASHFYIKYD 995
>gi|224048378|ref|XP_002196630.1| PREDICTED: activating signal cointegrator 1 complex subunit 3
[Taeniopygia guttata]
Length = 2207
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 103/394 (26%), Positives = 183/394 (46%), Gaps = 45/394 (11%)
Query: 14 EEFKFYLEEYAGVK-----GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGL 68
E++K +EE G K G P R + + + + T EK + S + + ++ +
Sbjct: 1399 EDWKVRIEEKLGKKVVELTGDVTPDMRAIAQADLIVTTPEKWDGVSRSWQNRSYVQKVAI 1458
Query: 69 IVIDEFHMLNEPQRGPILECVVSKVLYL----KKSIQIFAMSATIGNINALSTFIE-GIT 123
++IDE H+L + +RGP+LE +VS+ ++ +K +++ +S + N L+ ++
Sbjct: 1459 LIIDEIHLLGD-ERGPVLEVIVSRTNFISSHTEKPVRVVGLSTALANARDLADWLNINQM 1517
Query: 124 YVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVL 183
+ N RP+ + V Q F G+ A S+ A+ VL
Sbjct: 1518 GLFNFRPSVRPVPLEVH---IQGFPGQHYCPRMA-----SMNKPAFQAIRSHSPAK-PVL 1568
Query: 184 IFCSSKIACSNLALRLQFDRFPGTKEYKKQ-------EKEDLIEALKEENDGKLSTNLEE 236
IF SS+ AL L F T++ KQ E D+I +++ +NL+
Sbjct: 1569 IFVSSRRQTRLTALDLI--AFLATEDDPKQWLKMDEREMNDIIVTVRD-------SNLKL 1619
Query: 237 CILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS--YVG 294
+ +G+ HHA L +R+ +EE ++ +Q++ TSTLA GVN PA VI++ + Y G
Sbjct: 1620 TLAFGIGMHHAGLHERDRKTVEELFVNCKIQVLIATSTLAWGVNFPAHLVIVKGTEYYDG 1679
Query: 295 --RDFISLNMYK--QMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMD 350
R ++ + QM+GRAGR + G++++L ++ F P P+ S +
Sbjct: 1680 KTRRYVDYPITDVLQMMGRAGRPQFDDQGKAVILVHDIKK--DFYKKFLYEPFPVESSL- 1736
Query: 351 PPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQ 384
L D + +AA +S +D I T F++
Sbjct: 1737 LEVLADHLNAEIAAGTITSKQDAMDYITWTYFFR 1770
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 93/349 (26%), Positives = 160/349 (45%), Gaps = 61/349 (17%)
Query: 66 IGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKS----IQIFAMSATIGNINALSTFIE- 120
+ L+++DE H+L+E RGP+LE +V++ L +S I+I +SAT+ N ++TF+
Sbjct: 614 VKLLILDEVHLLHE-DRGPVLESIVARTLRQVESTQSMIRILGLSATLPNYLDVATFLHV 672
Query: 121 ----GITYVENS-RPTKHSEYVTVDKRVFQSFDG-KSLTEI----YADNLDYSLTGSGPD 170
G+ Y + RP + Q+F G K+ ++ + D + Y +
Sbjct: 673 NPYIGLFYFDGRFRPVP----------LGQTFIGIKTTNKVQQLNHMDEVCY-------E 715
Query: 171 AVLHLVQGNLMVLIFCSSKIACSNLALRLQFDR----------FPGTKEYKKQEKEDLIE 220
+VL + V++F ++ A A+ L+ P EY + EK+
Sbjct: 716 SVLKQIMAGHQVMVFVHARNATVRTAMALREKAKNSGHICHFLSPQGSEYGQAEKQ---- 771
Query: 221 ALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVN 280
+ N L E G + HHA + +R L+E + G ++++ CT+TLA GVN
Sbjct: 772 VQRSRN-----KQLRELFPDGFSIHHAGMLRQDRSLVENLFSNGHIKVLVCTATLAWGVN 826
Query: 281 LPAQRVIIRDS--YVGR--DFISLNMYK--QMVGRAGRTGLQESGESIMLCKTMQDFLRF 334
LPA V+I+ + Y + F+ L + Q+ GRAGR + GE I++ T D L
Sbjct: 827 LPAHAVVIKGTQIYAAKRGSFVDLGILDVMQIFGRAGRPQFDKFGEGIII--TTHDKLSH 884
Query: 335 SSMMNAGPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFY 383
+ PI S +L D + +A +++E+ I +T Y
Sbjct: 885 YLTLLTQQNPIESQF-LESLADNLNAEIALGTVTNVEEAVKWISYTYLY 932
>gi|91093851|ref|XP_970554.1| PREDICTED: similar to pre-mRNA-splicing helicase BRR2 [Tribolium
castaneum]
Length = 2137
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 110/396 (27%), Positives = 189/396 (47%), Gaps = 68/396 (17%)
Query: 28 GQYPPTKRQLNKKSIYICTIEK--------GSKLIGSLIQENRIDEIGLIVIDEFHMLNE 79
G + T+ Q+ I +CT EK G K SL++ LI+IDE H+L++
Sbjct: 566 GDHQLTREQIAGTQIIVCTPEKWDIITRKGGEKTFTSLVR--------LIIIDEIHLLHD 617
Query: 80 PQRGPILECVVSKVLYLKKSIQ----IFAMSATIGNINALSTFIE-----GITYVENS-R 129
+RGP+LE +V++ + + +S Q + +SAT+ N ++ F+ G+ Y +NS R
Sbjct: 618 -ERGPVLEALVARTIRMIESTQEDVRLVGLSATLPNYQDVAAFLRVKSDTGLFYFDNSFR 676
Query: 130 PTK-HSEYVTV-DKRVFQSFDGKSLTEI-YADNLDYSLTGSGPDAVLHLVQGNLMVLIFC 186
P +Y+ V +K+ + + + + EI Y ++++ G VLIF
Sbjct: 677 PVALEQQYIGVTEKKALKRY--QVMNEIVYEKTMEHA--------------GRNQVLIFV 720
Query: 187 SSKIACSNLA-----LRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYG 241
S+ A + L+ D ++ K E +E L+ E + + L++ + YG
Sbjct: 721 HSRKETGKTARAIRDMCLEKDTL---GQFLK-EGSASMEVLRTEAEQVKNHELKDLLPYG 776
Query: 242 VAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYV-----GRD 296
A HHA +T +R L+E+ + +Q++ T+TLA GVNLPA VII+ + + GR
Sbjct: 777 FAIHHAGMTRVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGR- 835
Query: 297 FISLNMYK--QMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTL 354
++ L QM+GRAGR GE I++ + + S++N PI S M L
Sbjct: 836 WVELGALDVLQMLGRAGRPQYDTRGEGILIT-NHSELQYYLSLLNQQL-PIESQM-ISKL 892
Query: 355 VDLILEVVAANLCSSLEDVKTLIKHTLFY--QLKSP 388
D++ + ++ D T + +T Y L+ P
Sbjct: 893 SDMLNAEIVLGTVQNVRDAVTWLGYTYLYIRMLRQP 928
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 157/335 (46%), Gaps = 45/335 (13%)
Query: 37 LNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYL 96
L K I I T EK L Q + + L ++DE H++ + GP++E V S++ Y+
Sbjct: 1414 LAKGQIVISTAEKWDVLSRRWKQRKNVQNVNLFIVDELHLIG-GEDGPVIEVVCSRMRYI 1472
Query: 97 ----KKSIQIFAMSATIGNINALSTFI-----EGITYVENSRPTKHSEYVTVDKRVFQSF 147
+K I+I A+SA++ + +S ++ + + RP +V
Sbjct: 1473 SSQIEKPIRIIALSASLMDYRDVSQWLGCNANATFNFHPSVRPVPLELHVQ--------- 1523
Query: 148 DGKSLTEIYADNLDYSLTGSGP--DAVLHLVQGNLMVLIFCSSKIACSNLALRL-QFDRF 204
G ++T N + + P +AV+ + V++F ++ A+ L +
Sbjct: 1524 -GINITH----NASRLIAMAKPVYNAVVRY-SPHKPVIVFVPTRKQSRLTAIDLLTYAAS 1577
Query: 205 PG-TKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLA 263
G + ++ E+ED+ L D L+E + GVAY H LTA + RL+E+ + +
Sbjct: 1578 EGQSNKFFHAEEEDIKPFLDRMTD----KTLKETLSQGVAYMHEGLTASDLRLVEQLFDS 1633
Query: 264 GTLQIICCTSTLAAGVNLPAQRVIIRDS--YVGR-----DFISLNMYKQMVGRAGRTGLQ 316
G +QI + L VN+ + VII D+ Y G+ D+ ++ QMVGRA R
Sbjct: 1634 GAVQIAVVSKDLCWTVNIYSYLVIIMDTQFYNGKVHSYEDYPITDVL-QMVGRANRPLED 1692
Query: 317 ESGESIMLCK-TMQDFLRFSSMMNAGPEPISSHMD 350
+ + +++C+ T +DF F ++ P P+ SH+D
Sbjct: 1693 DDAKCVLMCQSTKKDF--FKKFLSE-PLPVESHLD 1724
>gi|307104210|gb|EFN52465.1| hypothetical protein CHLNCDRAFT_138793 [Chlorella variabilis]
Length = 2323
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 117/424 (27%), Positives = 192/424 (45%), Gaps = 56/424 (13%)
Query: 28 GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILE 87
G Y P L + ICT EK + + + + ++GL+VIDE H+L RGPILE
Sbjct: 1462 GDYTPDMHALLAADVIICTPEKWDGISRNWRSRSYVRKVGLLVIDEIHLLGA-DRGPILE 1520
Query: 88 CVVSKVLYL----KKSIQIFAMSATIGNINALSTFIEGIT------YVENSRPTKHSEYV 137
+VS++ Y+ +++I+ +S + N L+ ++ GIT + + RP ++
Sbjct: 1521 VIVSRMRYIAAQTERAIRFVGLSTALANAQDLADWL-GITGPGLFNFKPSVRPVPLECHI 1579
Query: 138 TVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPD-AVLHLVQGNLMVLIFCSSKIACSNLA 196
Q + GK Y + T + P A + VLIF SS+ A
Sbjct: 1580 -------QGYPGK----FYCPRM---ATMNKPAYAAIQSHSPIKPVLIFVSSRRQTRLTA 1625
Query: 197 LRLQF-----DRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTA 251
L L DR +QE E + +++ +L + +G+ HHA L
Sbjct: 1626 LDLMAYAAADDRPRVFLRMTEQELEVEVAVVRD-------ASLRHTLQFGIGLHHAGLPD 1678
Query: 252 GERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIR-----DSYVGR--DFISLNMYK 304
+R L+E Y+ G +Q++ TSTLA GVN PA VII+ D+ R D+ ++
Sbjct: 1679 SDRELVERLYVGGKIQVLVATSTLAWGVNTPAHLVIIKGTEFYDAPTKRYVDYPITDVL- 1737
Query: 305 QMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAA 364
QM+GRAGR + G ++++ + F P P+ S + P L D V A
Sbjct: 1738 QMMGRAGRPQYDKHGVAVIMVHEPKK--SFYKKFLYEPFPVESSL-PAHLADHFNAEVVA 1794
Query: 365 NLCSSLEDVKTLIKHTLFYQ--LKSPEDQQTFLETTLSEIVASLLAS--KGTMLTMNEAG 420
S +D + T F + L++P LE+T E V++ L++ +G + + +AG
Sbjct: 1795 GTIKSRQDAVDYLTWTFFIRRLLQNPSYYD--LESTDQEAVSAYLSAMVEGVLAQLQDAG 1852
Query: 421 HLSL 424
L +
Sbjct: 1853 CLEV 1856
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 92/343 (26%), Positives = 156/343 (45%), Gaps = 49/343 (14%)
Query: 66 IGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKS----IQIFAMSATIGNINALSTFI-- 119
+ L++IDE H+LN+ +RGP++E +V++ +S I+I +SAT+ N + F+
Sbjct: 667 VRLLIIDEVHLLND-ERGPVIETLVARTTRQVESSQSMIRIVGLSATLPNYRDVGRFLGV 725
Query: 120 ---EGITYVENS-RPTK-HSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLH 174
G+ + + S RP ++V +R + ++ E+ + SL
Sbjct: 726 NSESGLFHFDASYRPVPLEMQFVGFSERNMMA-RLNAMDEVCYQKVTDSL---------- 774
Query: 175 LVQGNLMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEE------NDG 228
+ ++F S+ A L + ++ ++ L + EE D
Sbjct: 775 --KKGFQAMVFVHSRKDTGKTARMLAL-------KAQQNGEQSLFDCTLEEAFPYLQRDM 825
Query: 229 KLSTNLE--ECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRV 286
K S N E E G+ HHA + +R L+E A+ G ++++CCT+TLA GVNLPA V
Sbjct: 826 KKSQNREIGELFDAGLGIHHAGMVRSDRNLMERAFGQGLIKVLCCTATLAWGVNLPAHTV 885
Query: 287 IIRDSYV----GRDFISLNM--YKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNA 340
II+ + + F L M +Q+ GRAGR Q++GE I+L T D L M
Sbjct: 886 IIKGTQLYSPQKGGFTDLGMLDVQQVFGRAGRPQFQDTGEGIIL--TTHDKLAHYLSMLT 943
Query: 341 GPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFY 383
PI S LVD + + +++ + + +T Y
Sbjct: 944 HQVPIESQFT-AGLVDHLNAEIVLGTVTNVREASKWLSYTYLY 985
>gi|312372488|gb|EFR20440.1| hypothetical protein AND_20103 [Anopheles darlingi]
Length = 1301
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 121/469 (25%), Positives = 216/469 (46%), Gaps = 55/469 (11%)
Query: 14 EEFKFYLEEYAGVK-----GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGL 68
+++K LE+ G K G P R + + S+ + T EK + S + + ++ L
Sbjct: 632 DDWKVRLEKKLGKKVVELTGDVTPDIRAIKESSVIVTTPEKWDGISRSWQTRDYVRDVAL 691
Query: 69 IVIDEFHMLNEPQRGPILECVVSKVLYL----KKSIQIFAMSATIGNINALSTFIE-GIT 123
IVIDE H+L E RGP+LE +VS++ ++ ++ ++I +S + N L ++ G+
Sbjct: 692 IVIDEIHLLGE-DRGPVLEVIVSRMNFISSHTERKVRIVGLSTALANAVDLGDWLGIGMM 750
Query: 124 YVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVL 183
+ N +P+ +TV Q F GK A ++ A+ L
Sbjct: 751 GLYNFKPSVRPVPLTVH---IQGFPGKHYCPRMA-----TMNRPAFQAIRQYSPCT-PTL 801
Query: 184 IFCSS----KIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECIL 239
IF +S ++ +L L + P K++ +E++ + L+ D NL +
Sbjct: 802 IFVASRRQTRLTAMDLINFLAVEDNP--KQFLHTSEEEMDQILQNVRD----NNLRLTLA 855
Query: 240 YGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS--YVG--R 295
+G+ HHA L +R+ EE +L +QI+ T+TLA GVNLPA VII+ + Y G +
Sbjct: 856 FGIGMHHAGLHERDRKTSEELFLNRKIQILVATATLAWGVNLPAHLVIIKGTEFYDGKLK 915
Query: 296 DFISLNMYK--QMVGRAGRTGLQESGESIMLCKTMQDFLR-FSSMMNAGPEPISSHMDPP 352
++ + + QM+GRAGR G + C + D + F P P+ S +
Sbjct: 916 RYVDMPITDVLQMMGRAGRPQFGNEG---IACVYVHDVKKNFYKKFLYDPFPVESSLLAV 972
Query: 353 TLVDLILEVVAANLCS--SLEDVKT-------LIKHTLFYQLKSPEDQQTFLETTLSEIV 403
+ E+V+ L + ++ D T L+++ +Y L+SP+ + LSE++
Sbjct: 973 LPDHINAEIVSGTLQTKQAIMDYLTWTYFYRRLLRNPTYYDLESPD--MPLVNQFLSELI 1030
Query: 404 ASL---LASKGTMLTMNEAGHLSLTSIAKAAVQAGLSHDVCLIIYSDLL 449
+ L G ++ + L TS+ + A LSH + +++D L
Sbjct: 1031 EGVLDKLMRAGCVVLEEDNRSLVPTSMGRIASYYYLSH-TTMRLFADTL 1078
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 103/220 (46%), Gaps = 21/220 (9%)
Query: 241 GVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYV----GRD 296
G+A H+A + +R L+E+ + G ++I+ CT+TLA GVNLPA VII+ + +
Sbjct: 21 GLAMHNAGMLRSDRNLVEKYFADGLIKILVCTATLAWGVNLPAHAVIIKGTEIYDAKHGS 80
Query: 297 FISLNMYK--QMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTL 354
F+ L + Q+ GRAGR +SG ++ T D L + PI S+
Sbjct: 81 FVDLGILDVLQIFGRAGRPQFDKSGVGTII--TAHDKLNHYLSLLTNQFPIESNFVQCLA 138
Query: 355 VDLILEVVAANLCSSLEDVKTLIKHTLFYQLK-SPE---------DQQTFLETTLSEIV- 403
+L EV + + E + L LF +++ +P+ + LE +++
Sbjct: 139 DNLNAEVTLGTISNVDEAIVWLSYTYLFVRMRMNPQCYGLHYQDLQEDPTLERKRRQLIH 198
Query: 404 -ASLLASKGTMLTMNE-AGHLSLTSIAKAAVQAGLSHDVC 441
A++ K M+ NE G L++T + + A + +D
Sbjct: 199 TAAMALDKARMVRYNERTGDLNVTDLGRTASHFYIKYDTV 238
>gi|291613570|ref|YP_003523727.1| DEAD/DEAH box helicase domain protein [Sideroxydans lithotrophicus
ES-1]
gi|291583682|gb|ADE11340.1| DEAD/DEAH box helicase domain protein [Sideroxydans lithotrophicus
ES-1]
Length = 909
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 86/323 (26%), Positives = 159/323 (49%), Gaps = 13/323 (4%)
Query: 69 IVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVENS 128
I+ DE +L E +RGP +E ++ +L + Q +++AT+ N +S ++E
Sbjct: 140 IIADELQILGEDKRGPEIE-ILCALLRQRGVKQFISLTATVSNGEDISGWLECDLVESGH 198
Query: 129 RPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLV-QGNLMVLIFCS 187
R + + + D ++F G+ E A + ++L + DAV L+ Q VL+F
Sbjct: 199 RDVELVQEIWADGKIFSIRFGQEEGE--AKDPGHALPTNTLDAVERLLLQKRGPVLVFTE 256
Query: 188 SKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHA 247
++ S LA + Y E+ L E S L++ VA+H A
Sbjct: 257 TRRDASELAAQYASRCTKTVDGYNFAEQLSLFSEATE-----FSDRLKDTAEAKVAFHTA 311
Query: 248 DLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVI---IRDSYVGRDFISLNMYK 304
DLT ER ++E+ + GT + T TLAAGVN P Q V+ I Y+ + + Y+
Sbjct: 312 DLTQSERAVVEQGLIDGTFNVCFATPTLAAGVNFPFQTVLFDRIHRRYIPPPPLPIGNYR 371
Query: 305 QMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAA 364
M GRAGR G+ E G S+++ + + + ++ E ++S + ++ ++L ++A+
Sbjct: 372 NMSGRAGRLGMHERGYSVLIPRDQIEAKHANVLVLPENERLTSKLISLSVRKIVLTLIAS 431
Query: 365 NLCSSLEDVKTLIKHTLF-YQLK 386
S+E+++ +++TL+ YQ++
Sbjct: 432 GSAGSIEEIREFLENTLYWYQIR 454
>gi|226288385|gb|EEH43897.1| activating signal cointegrator 1 complex subunit 3
[Paracoccidioides brasiliensis Pb18]
Length = 2011
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 100/374 (26%), Positives = 181/374 (48%), Gaps = 36/374 (9%)
Query: 33 TKRQLNKKSIYICTIEKGSKLIGSLIQENR-IDEIGLIVIDEFHMLNEPQRGPILECVVS 91
TK+++ + I + T EK + + ++ L++IDE HML++ +RG ++E +V+
Sbjct: 384 TKKEIVQTQIIVTTPEKWDVVTRKGTGNTELVQKVRLLIIDEVHMLHD-ERGAVIESLVA 442
Query: 92 KVLYLKKS----IQIFAMSATIGNINALSTFIE-----GITYVENS-RPTKHSEYVTVDK 141
+ +S I+I +SAT+ N ++ F++ G+ Y + S RP ++
Sbjct: 443 RTQRQVESTQSLIRIVGLSATLPNYIDVADFLKVNRMAGLFYFDASFRPVPLEQH----- 497
Query: 142 RVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSK---IACSNLALR 198
F G + T+ +NLD + V +++ V++F S+ + + L R
Sbjct: 498 --FIGVKGDAGTKKSRENLDIVCF----EKVREMLERGHQVMVFVHSRKETLNAARLLRR 551
Query: 199 LQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIE 258
+ D + E E+ +AL++ + + E + YG+ HHA + +R L+E
Sbjct: 552 MAVDN-QCADLFSPVEHENYSQALRDIKTSR-GREIRELVPYGLGTHHAGMARSDRNLME 609
Query: 259 EAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS--YVGRD--FISLNMYK--QMVGRAGR 312
+ G L+++CCT+TLA GVNLPA VII+ + Y ++ FI L + Q+ GRAGR
Sbjct: 610 RLFSEGVLKVLCCTATLAWGVNLPAAAVIIKGTQLYSAQEGKFIDLGILDVLQIFGRAGR 669
Query: 313 TGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAANLCSSLED 372
Q++G LC + + S + + EPI S + +L E+ + S E
Sbjct: 670 PQFQDTGIG-FLCTSHNKLQHYLSAVTSQ-EPIESRFSRKLVDNLNAEIALGTVTSVPEA 727
Query: 373 VKTLIKHTLFYQLK 386
V+ L LF +++
Sbjct: 728 VQWLGYSYLFVRMR 741
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 101/381 (26%), Positives = 167/381 (43%), Gaps = 52/381 (13%)
Query: 28 GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILE 87
G P R + I I T EK + S + ++ L++IDE H+L RGPILE
Sbjct: 1223 GDNTPDTRTIRDADIIITTPEKWDGISRSWQTRGYVRQVSLVIIDEIHLLGS-NRGPILE 1281
Query: 88 CVVSKVLYL----KKSIQIFAMSATIGNINALSTFI---EGITYVENS-RPTKHSEYVT- 138
+VS++ Y+ K ++++ MS N L ++ EG+ +S RP Y+
Sbjct: 1282 IIVSRMNYIASQSKGAVRLLGMSTACANATDLGNWLGVKEGLFNFRHSVRPVPLEIYIDG 1341
Query: 139 -VDKRVF----QSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACS 193
++R F QS + + I PD V++F +S+
Sbjct: 1342 FPEQRGFCPLMQSMNRPTFLAI---------KNHSPDKP---------VIVFVASRRQTR 1383
Query: 194 NLALRLQFDRFPGTKEYKKQ----EKEDLIEALKEENDGKLSTNLEECILYGVAYHHADL 249
A L F G ++ ++ +EDL L D L+E + +G+A HHA L
Sbjct: 1384 LTAKDLI--NFCGMEDNPRRFLHMPEEDLQLNLSRVKD----EALKEALGFGIALHHAGL 1437
Query: 250 TAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYV------GRDFISLNMY 303
+R+L EE + +QI+ TSTLA GVNLPA V+++ + G + L
Sbjct: 1438 VESDRQLSEELFANNKIQILVATSTLAWGVNLPAHLVVVKGTQFFDAKIEGYKDMDLTDV 1497
Query: 304 KQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVA 363
QM+GRAGR SG + + + + + ++ G P+ S + L D + V+
Sbjct: 1498 LQMLGRAGRPQFDTSGIARIFTQGSKKAF-YKHFLHTG-FPVESTLH-KVLHDHLAAEVS 1554
Query: 364 ANLCSSLEDVKTLIKHTLFYQ 384
A ++ +D + T F++
Sbjct: 1555 AGTITTKQDALDYLTWTFFFR 1575
>gi|302765951|ref|XP_002966396.1| hypothetical protein SELMODRAFT_144158 [Selaginella moellendorffii]
gi|300165816|gb|EFJ32423.1| hypothetical protein SELMODRAFT_144158 [Selaginella moellendorffii]
Length = 2164
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 126/474 (26%), Positives = 219/474 (46%), Gaps = 61/474 (12%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V E +L K ++ ++E G + +++Q+ + I + T EK +
Sbjct: 565 LVAEMVGNLQKRLADYGVVVKELTGDQSL---SRQQIEETHIIVATPEKWDIITRKSGDR 621
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKS----IQIFAMSATIGNINALS 116
+ L++IDE H+L++ RGP+LE +V++ L ++ I++ +SAT+ N +S
Sbjct: 622 AYTQLVKLVIIDEIHLLHD-GRGPVLESIVARTLRQVETTHDMIRLVGLSATLPNYVDVS 680
Query: 117 TFIE-----GITYVENS-RPTKHSE-YVTVD-KRVFQSFDGKSLTEIYADNLDYSLTGSG 168
F+ G+ + +NS RP S+ YV + K+ Q F + + EI + +
Sbjct: 681 MFLRVDKSRGLFHFDNSFRPVPLSQQYVGISVKKPLQRF--QLMNEICYEKV-------- 730
Query: 169 PDAVLHLVQGNLMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLI--EALKEEN 226
V G +LIF S+ + A ++ D K K D E L+ E
Sbjct: 731 -----LAVAGKSQILIFVHSRKETAKTAKAIR-DSALTNDTLGKFLKGDSASSEILRTEA 784
Query: 227 DGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRV 286
+ +T+L+ + YG A HHA + +R L+EE + G +Q++ T+TLA GVNLPA V
Sbjct: 785 ENVKNTDLKGLLSYGFAIHHAGMARADRTLVEELFADGHIQVLVSTATLAWGVNLPAHTV 844
Query: 287 IIRDSYV------GRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNA 340
II+ + V +S QM+GRAGR +GE I++ + + S+MN
Sbjct: 845 IIKGTQVYNPEKGAWTELSPMDVMQMLGRAGRPQFDSTGEGIIIT-GHSELSYYLSLMNQ 903
Query: 341 GPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKTL---------IKHTLFYQLKSPEDQ 391
PI S +L E+V + ++ E L +++ L Y + +PE
Sbjct: 904 QL-PIESQFISKLPDNLNAEIVLGTVQNAREACAWLGYTYLYIRMLRNPLLYGV-NPEVL 961
Query: 392 QTFLETTLSEIVASLLASKGTMLTMN-------EAGHLSLTSIAKAAVQAGLSH 438
+T + TL E A L+ + T+L N ++G+ +T + + A +SH
Sbjct: 962 ET--DETLEERRADLIHTAATILDKNNLVKYDRKSGYFQVTDLGRIASHYYISH 1013
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 87/360 (24%), Positives = 165/360 (45%), Gaps = 35/360 (9%)
Query: 10 AKAAEEFKFYLEEYAGVK-------GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENR 62
A A E F+ + +++A +K G+ + L++ + I T E+ L Q +
Sbjct: 1404 ALAKERFEDWEKKFADLKVQVVQLTGETAMDLKLLDRGQVIISTPERWDVLSRRWKQRKQ 1463
Query: 63 IDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKS----IQIFAMSATIGNINALSTF 118
I ++ L ++DE H++ + GP+LE +VS++ Y+ K I+I A+SA++ N L +
Sbjct: 1464 IGQVNLFLVDELHLIG-GEGGPVLEVIVSRMRYISKQAGDKIRIVALSASLANAKDLGDW 1522
Query: 119 IEGITY-VENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQ 177
I ++ + N P + + G +T A ++T A+L +
Sbjct: 1523 IGASSHGLFNFSPAVRPVPLEI------HIQGVDITNFEARV--QAMTKPTFTAILQHAK 1574
Query: 178 GNLMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEEC 237
G L+F ++ + A L G + + ++DL L+ D L+E
Sbjct: 1575 GGKPALVFVPTRKHARSTASDLVLYALAGGNSFLQCTEKDLEPLLERIRD----PELKET 1630
Query: 238 ILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS--YVGR 295
+ GV Y H L+ E+ ++ E + AG +Q+ +S++ G+ L A +++ + Y GR
Sbjct: 1631 LQGGVGYLHEGLSPTEQEIVGELFSAGAIQVCVASSSMCWGMTLTAHLLVVMGTQYYDGR 1690
Query: 296 -----DFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMD 350
D+ ++ QM+GRA R + SG+ ++LC + + P P+ SH+D
Sbjct: 1691 ENAHTDYPITDLL-QMMGRASRPLVDSSGKCVILCHAPRK--EYYKKFLYEPFPVESHLD 1747
>gi|269986982|gb|EEZ93258.1| DEAD/DEAH box helicase domain protein [Candidatus Parvarchaeum
acidiphilum ARMAN-4]
Length = 549
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 99/361 (27%), Positives = 168/361 (46%), Gaps = 31/361 (8%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
++ EKY K + K L G Y ++K + + EK +I + +Q
Sbjct: 81 LISEKYDDFTKDNSDIKAILS-----IGDYNEKDYNIDKYDVVFASTEKFDSIIRNSLQ- 134
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIE 120
+I IG I+ DE H+L++ RGP LE +++ L + QI +SATIGN + L+ +++
Sbjct: 135 -KIGNIGCIIYDEVHLLSDIGRGPTLEFLITLNKLLFPNAQIIGLSATIGNSDELADWLK 193
Query: 121 GITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNL 180
+ RP V + K+ + F+G+ L + L+ + L + N
Sbjct: 194 ADLVKSDFRP------VILSKKKY--FEGE-LINGSVEKLNNGYDDPLSNITAWLFKNNK 244
Query: 181 MVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEEC--- 237
L+F +K + A + G+K + +K+ L ++ +E G L +C
Sbjct: 245 QALVFSQNKRNVVSNAKTIS--SLIGSKLLEDDKKKLL--SVSKEILGVLDRPTTQCEIL 300
Query: 238 ---ILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVII----RD 290
+ GVA+HHA L +R++IE+ + G ++ I T TLA GVNLPA VII R
Sbjct: 301 SDLVKNGVAFHHAGLVNRQRKIIEDNFKKGLIKFIVATPTLAMGVNLPANTVIINSIRRY 360
Query: 291 SYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGP-EPISSHM 349
G + + +QM+GRAGR + G +I++ + + +G EPI+S
Sbjct: 361 GDYGMELLPAIEIEQMMGRAGRPRYDKEGNAIIVARNESELEIIDQKYFSGEVEPITSKF 420
Query: 350 D 350
+
Sbjct: 421 N 421
>gi|355336776|gb|AER57873.1| putative RNA helicase [Acytostelium subglobosum]
Length = 2168
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 91/318 (28%), Positives = 153/318 (48%), Gaps = 34/318 (10%)
Query: 33 TKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSK 92
T +Q+++ I + T EK + + + L++IDE H+L++ +RGP+LEC+V++
Sbjct: 593 TNKQISETQIIVTTPEKWDIITRKSGERAYTQLVRLVIIDEIHLLHD-ERGPVLECIVAR 651
Query: 93 VLYLKKSIQ----IFAMSATIGNINALSTFI----EGITYVENS-RPTK-HSEYVTVDKR 142
L +S Q + +SAT+ N ++TF+ EG+ Y ++S RP +Y+ + R
Sbjct: 652 TLRTIESTQEMVRLVGLSATLPNYEDVATFLRVKPEGVFYFDSSYRPIPLEQQYIGISDR 711
Query: 143 VFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRLQFD 202
+ + D + A G +LIF S+ ++
Sbjct: 712 GIKQLQLMN---------DITFKKVAERA------GKHQMLIFVHSRRETGKTGRDIRDR 756
Query: 203 RFPGTKEYKKQEKEDLIEALKEENDGKL-STNLEECILYGVAYHHADLTAGERRLIEEAY 261
+ + +E LKE + + S L+E + YG+ HHA L +R L+EE +
Sbjct: 757 AIEADVIGQLLKSRASVEVLKEAAEKSVKSAELKELLPYGIGIHHAGLARTDRILVEELF 816
Query: 262 LAGTLQIICCTSTLAAGVNLPAQRVIIRDSYV-----GRDFISLNMYKQMVGRAGRTGLQ 316
+QI+ T+TLA GVNLPA VII+ + V G +S QM+GRAGR
Sbjct: 817 EDQRIQILISTATLAWGVNLPAHTVIIKGTQVYNPEKGWTELSPLDVTQMLGRAGRPPFD 876
Query: 317 ESGESIMLCKTMQDFLRF 334
+ GE I++ T Q+ ++F
Sbjct: 877 KDGEGIIV--TSQNEMQF 892
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 94/363 (25%), Positives = 171/363 (47%), Gaps = 34/363 (9%)
Query: 37 LNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYL 96
L + +I + T EK L Q + + L ++DE HM+ G I+E VVS++ Y+
Sbjct: 1433 LEQSNIVVTTAEKWDILSRRWKQRKSVQSVALFIVDELHMIGGGAEGSIMEIVVSRMRYI 1492
Query: 97 K----KSIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRV-FQSFDGKS 151
K I+I A+S+ + N L+ +I G T ++ H + V ++ Q FD
Sbjct: 1493 AIQTGKPIRIVALSSPVANARDLAEWI-GAT--PSTMFNLHPDVRPVPLQIQIQGFDFP- 1548
Query: 152 LTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACS---NLALRLQFDRFPGTK 208
+ + ++T AV H G +V + S KIA S ++ + + + K
Sbjct: 1549 ----HYNARILAMTKPTIYAVSHNKAGQSLVFV-PSRKIARSLVKDIIVHVDSEEDTTKK 1603
Query: 209 EYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQI 268
Y + + DL LK S L++ + +GV ++H LTA E+R +E+ + +G +Q+
Sbjct: 1604 RYLRCAESDL--DLKNIE----SVALKQSLQWGVGFYHEGLTALEKRTVEKLFQSGAIQV 1657
Query: 269 ICCTSTLAAGVNLPAQRVIIRDS--YVGR-----DFISLNMYKQMVGRAGRTGLQESGES 321
+ T ++ +++ + VII + Y G+ D+ ++N QM+GRAG+ G+ + G+
Sbjct: 1658 LVATHSVCWSLDVYSSLVIIMGTQLYQGKTTRYVDY-AINDVLQMIGRAGKQGIDDVGKC 1716
Query: 322 IMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTL 381
++LC + + + M P P+ SH+D L D + S +D + T
Sbjct: 1717 LLLCHSPKK--EYYKMFLNQPLPVESHLD-HFLADHFNSEIVTKTISKKQDALDYLTWTF 1773
Query: 382 FYQ 384
Y+
Sbjct: 1774 LYR 1776
>gi|58271142|ref|XP_572727.1| DNA helicase [Cryptococcus neoformans var. neoformans JEC21]
gi|57228986|gb|AAW45420.1| DNA helicase, putative [Cryptococcus neoformans var. neoformans
JEC21]
Length = 1465
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 94/328 (28%), Positives = 157/328 (47%), Gaps = 69/328 (21%)
Query: 60 ENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFI 119
EN + LI+IDE H+L E RG LE V+S++ L + I+ A+SAT+ NI+ ++ ++
Sbjct: 319 ENMSQRLRLIMIDEVHILRE-SRGATLEVVISRLKGLGRGIRFVALSATVPNIDDIARWL 377
Query: 120 EGITYVENSRPTKH----SEYVTVDKRVFQSFDGKSLTEIYA----------DNLDYSLT 165
G T E + ++ E ++ ++ + D + ++Y Y +
Sbjct: 378 -GPTRNEYGQLSRGVLVGREVISAKEKRAPAVDDMPMAKVYKFGEEYRPVPLQRETYGIE 436
Query: 166 GSGPD-AVLHLVQGNLM-----------VLIFCSSKIACSNLA--------------LRL 199
+G D A+ + + L VL+FC ++ +C A L+L
Sbjct: 437 STGNDWALANRLDKELFPILLRHAAGQPVLVFCPTRKSCQATAESIFQSYEEARAKGLKL 496
Query: 200 QFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEE 259
+ PG + E D KL T L C G+A HHA L G+RR IE+
Sbjct: 497 PWQHPPGVR--------------LELQDKKL-TELSTC---GIAVHHAGLDYGDRRAIED 538
Query: 260 AYLAGTLQIICCTSTLAAGVNLPAQRVIIRD--SYVG-----RDFISLNMYKQMVGRAGR 312
+ G L +I TSTLA GVNLPA V+I+ ++ G +++ +++ +QMVGRAGR
Sbjct: 539 GFRDGKLHMIASTSTLAVGVNLPAHTVVIKGVMAWQGASSGFQEYSDIDI-QQMVGRAGR 597
Query: 313 TGLQESGESIMLCKTMQDFLRFSSMMNA 340
SG +++C+ + ++ SM+N+
Sbjct: 598 PQYDTSGVVVVMCERSK-VRKYQSMLNS 624
>gi|119484236|ref|XP_001262021.1| pre-mRNA splicing helicase, putative [Neosartorya fischeri NRRL 181]
gi|119410177|gb|EAW20124.1| pre-mRNA splicing helicase, putative [Neosartorya fischeri NRRL 181]
Length = 2209
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 122/478 (25%), Positives = 225/478 (47%), Gaps = 53/478 (11%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V E+ +L K E + + E G + TK+Q+ + + + T EK + +
Sbjct: 600 LVQEQVGNLGKRLEPYGIRVSELTGDRQL---TKQQIAETQLIVTTPEKFDVITRKASET 656
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVS----KVLYLKKSIQIFAMSATIGNINALS 116
+ I + LI+IDE H+L++ +RGP++E +VS KV + ++I +SAT+ N ++
Sbjct: 657 SYIKLVRLIIIDEIHLLHD-ERGPVIESIVSRTIRKVEQTGEPVRIVGLSATLPNYRDVA 715
Query: 117 TFI-----EGITYVENS-RPTK-HSEYVTV-DKRVFQSFDGKSLTEIYADNLDYSLTGSG 168
+F+ +G+ + + S RP E++ V DK+ + K + +I + +
Sbjct: 716 SFLRVDPNKGLFHFDGSYRPCPLKQEFIGVTDKKAIKQL--KMMNDICYNKV-------- 765
Query: 169 PDAVLHLVQGNLMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEA--LKEEN 226
+ + Q +LIF S+ + A ++ D+ + + + D L EE
Sbjct: 766 ---LEQVGQRRNQMLIFVHSRKETAKTAKYIR-DKALEMETIGQILRSDAASRAILAEEA 821
Query: 227 DGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRV 286
+ +L++ + YG HHA L+ +R ++ + G++Q++ CT+TLA GVNLPA V
Sbjct: 822 ESVDDASLKDLLPYGFGIHHAGLSLADRDSVQALFADGSIQVLVCTATLAWGVNLPAHTV 881
Query: 287 IIRDSYV----GRDFISLNMYK--QMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNA 340
II+ + V ++ L+ QM+GRAGR GE I++ + + + S+MN
Sbjct: 882 IIKGTQVYSPEKGSWVELSPQDVLQMLGRAGRPQYDTFGEGIIIT-SQTEIQYYLSLMNQ 940
Query: 341 GPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQ-LKSPE--------DQ 391
PI S + ++ E+V N+ + E V+ L LF + L+SP +
Sbjct: 941 Q-LPIESQLMSKLADNMNAEIVLGNIRNRDEGVEWLGYTYLFVRMLRSPGLYSVGADYEN 999
Query: 392 QTFLETTLSEIV---ASLLASKGTMLTMNEAGHLSLTSIAKAAVQAGLSHDVCLIIYS 446
LE ++V A +L G + + G L T + + A + H+ ++ YS
Sbjct: 1000 DDALEQKRVDLVHSAAVILERAGLIKYEKKTGRLQSTELGRIASHYYIGHN-SMLTYS 1056
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 89/414 (21%), Positives = 176/414 (42%), Gaps = 58/414 (14%)
Query: 37 LNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKV--- 93
L++ + + T + L + + + L + DE HML G + E VVS++
Sbjct: 1476 LDQADLVLATPTQWDVLSRQWQRRKNVQSVQLFIADELHMLGG-YGGYVYEVVVSRMHSI 1534
Query: 94 -LYLKKSIQIFAMSATIGNINALSTFIEGITY-VENSRPTKHSEYVTVDKRVFQSFD--- 148
L L+ ++I +S + N + +I + + N P H+ V ++ + QSF
Sbjct: 1535 ALQLENGMRIVGLSVPLANARDIGEWIGANKHTIYNFSP--HARPVPLELHI-QSFSIPH 1591
Query: 149 GKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRL--------Q 200
SL A +S+ PD L+F ++ + A+ L
Sbjct: 1592 FPSLMLAMAKPAYHSILQLAPDKP---------ALVFVPNRKQTRSTAIDLLAACAADDN 1642
Query: 201 FDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEA 260
DRF E L+ ++E L E + +G+ Y+H L+A ++R++
Sbjct: 1643 EDRF---LHADVNELAPLLNRIQER-------TLAESLSHGIGYYHEALSATDKRIVSHL 1692
Query: 261 YLAGTLQIICCTSTLAAGVNLPAQRVIIRDS--YVGRD--FISLNMYK--QMVGRAGRTG 314
+ G +Q++ + + +NL A VI+ + + GR+ +I + + QM G+A R
Sbjct: 1693 FTIGAIQVLLASRDVCWDLNLTAHLVIVMGTQFFEGREHRYIDYPISEILQMFGKATRPK 1752
Query: 315 LQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAANLCSSLEDVK 374
+ G +++ +++ + +N P+ SH+ L D + ++ +S +D
Sbjct: 1753 EDKIGRGVLMVPSVKREY-YKKFLNEA-LPVESHLQ-LYLHDAFVTEISTRTITSTQDAV 1809
Query: 375 TLIKHTLFYQ--LKSP------EDQQTFLETTLSEIVASLLA--SKGTMLTMNE 418
+ +T FY+ L +P + L T LSE+V + L S+ ++ ++E
Sbjct: 1810 DWMTYTYFYRRLLANPSFYGLSDISHEGLSTFLSELVENTLRELSEAKIIDLDE 1863
>gi|255945339|ref|XP_002563437.1| Pc20g09410 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211588172|emb|CAP86270.1| Pc20g09410 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 2205
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 126/507 (24%), Positives = 234/507 (46%), Gaps = 60/507 (11%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V E+ +L K E + + E G + TK+Q+ I + T EK + +
Sbjct: 594 LVQEQVGNLGKRLEPYGIRVSELTGDRQL---TKQQIADTQIIVTTPEKYDVITRKATET 650
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVL----YLKKSIQIFAMSATIGNINALS 116
+ + + L+VIDE H+L++ +RGP+LE +VS+ + + ++I +SAT+ N +
Sbjct: 651 SYTNLVRLVVIDEIHLLHD-ERGPVLESIVSRTIRKTEQTGEPVRIVGLSATLPNYRDVG 709
Query: 117 TF-----IEGITYVENS-RPTK-HSEYVTV-DKRVFQSFDGKSLTEI-YADNLDYSLTGS 167
+F ++G+ + + S RP E++ V +K+ + K++ +I Y ++
Sbjct: 710 SFLRADPVKGMFHFDGSYRPCPLKQEFIGVTEKKAIKQL--KTMNDICYTKVME------ 761
Query: 168 GPDAVLHLVQGNLMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEA--LKEE 225
+ Q +LIF S+ + A ++ D+ + + + D L EE
Sbjct: 762 ------QVGQHRNQMLIFVHSRKETAKTAKYIR-DKALENETIGQILRSDAASRAILSEE 814
Query: 226 NDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQR 285
D +L++ + YG+ HHA L+ +R ++ + G++Q++ CT+TLA GVNLPA
Sbjct: 815 ADSVDDASLKDLMPYGLGIHHAGLSLADRDSVQALFADGSIQVLVCTATLAWGVNLPAHT 874
Query: 286 VIIRDSYVGRD----FISLNMYK--QMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMN 339
VII+ + V ++ L+ QM+GRAGR GE I++ + + + S++N
Sbjct: 875 VIIKGTQVYSPEKGAWVELSPQDVLQMLGRAGRPQYDTFGEGIIIT-SQAEIQYYLSLLN 933
Query: 340 AGPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFY--QLKSP--------- 388
PI S + + +L E+V N+ + E V L +T Y L+SP
Sbjct: 934 QQ-LPIESQLMSKLVDNLNAEIVLGNVRTRDEGVDWL-GYTYLYVRMLRSPGLYSVGADY 991
Query: 389 EDQQTFLETTLSEI--VASLLASKGTMLTMNEAGHLSLTSIAKAAVQAGLSHDVCLIIYS 446
+D + + I A++L G + + G L T + + + + H+ ++ YS
Sbjct: 992 QDDDALEQKRVDLIHSAAAVLEKAGLVKYEKKTGRLQSTELGRISSHYYIGHN-SMLTYS 1050
Query: 447 DLLHNKLNFCLLNSLHML---FLVIPL 470
L + L + L F IP+
Sbjct: 1051 QHLQPSITTIELFRIFALSDEFKYIPV 1077
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 86/399 (21%), Positives = 171/399 (42%), Gaps = 52/399 (13%)
Query: 37 LNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYL 96
L + + + T + L + I + L + DE H+L G + E +VS++ Y+
Sbjct: 1470 LEQADLVLATPTQWDVLSRQWQRRKNIQTVQLFIPDELHLLGG-YAGYVYEVIVSRMHYI 1528
Query: 97 ----KKSIQIFAMSATIGNINALSTFIEGITY-VENSRPTKHSEYVTVDKRVFQSFDGKS 151
+ ++I +S + N + +I + + N P H+ V ++ + QSF S
Sbjct: 1529 ALQTENEMRIVGLSVPLSNARDIGEWIGANKHTIYNFSP--HARPVPLELHL-QSF---S 1582
Query: 152 LTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRL--------QFDR 203
+ + L ++ ++L L + L+F S+ A L DR
Sbjct: 1583 IPHFPSAML--AMARPAYQSILQL-SPDKPALVFVPSRKQVRATAADLLSACAIDNDEDR 1639
Query: 204 FPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLA 263
F + +L L ++ L+T+L +G+ Y+H L A ++R++ +
Sbjct: 1640 F------LNADVNELAPLLGRIHEQTLATSLS----HGIGYYHEALNATDKRIVLHLFSI 1689
Query: 264 GTLQIICCTSTLAAGVNLPAQRVIIRDS--YVGRD--FISLNMYK--QMVGRAGRTGLQE 317
G +Q++ + + +++ A VII ++ + GR+ +I + QM G+A R G +
Sbjct: 1690 GAIQVLLASRDVCWELDITAHLVIIMNTQFFEGREHRYIDYPISDILQMFGKASRPGQDK 1749
Query: 318 SGESIMLCKTMQ-DFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKTL 376
G +++ ++ D+ + +N P+ SH+ L D + + SS +D
Sbjct: 1750 LGRGVLMVPAVKRDY--YKKFLNEA-LPVESHLQ-VYLHDAFVTEASTRTISSTQDAVDW 1805
Query: 377 IKHTLFYQ--LKSP------EDQQTFLETTLSEIVASLL 407
+ +T FY+ L +P + L T LSE+V + L
Sbjct: 1806 MTYTYFYRRLLANPSFYGLSDVSHEGLSTFLSELVENTL 1844
>gi|225683146|gb|EEH21430.1| activating signal cointegrator 1 complex subunit 3
[Paracoccidioides brasiliensis Pb03]
Length = 2011
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 100/374 (26%), Positives = 181/374 (48%), Gaps = 36/374 (9%)
Query: 33 TKRQLNKKSIYICTIEKGSKLIGSLIQENR-IDEIGLIVIDEFHMLNEPQRGPILECVVS 91
TK+++ + I + T EK + + ++ L++IDE HML++ +RG ++E +V+
Sbjct: 384 TKKEIVQTQIIVTTPEKWDVVTRKGTGNTELVQKVRLLIIDEVHMLHD-ERGAVIESLVA 442
Query: 92 KVLYLKKS----IQIFAMSATIGNINALSTFIE-----GITYVENS-RPTKHSEYVTVDK 141
+ +S I+I +SAT+ N ++ F++ G+ Y + S RP ++
Sbjct: 443 RTQRQVESTQSLIRIVGLSATLPNYIDVADFLKVNRMAGLFYFDASFRPVPLEQH----- 497
Query: 142 RVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSK---IACSNLALR 198
F G + T+ +NLD + V +++ V++F S+ + + L R
Sbjct: 498 --FIGVKGDAGTKKSRENLDIVCF----EKVREMLERGHQVMVFVHSRKETLNAARLLHR 551
Query: 199 LQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIE 258
+ D + E E+ +AL++ + + E + YG+ HHA + +R L+E
Sbjct: 552 MAVDN-QCADLFSPVEHENYSQALRDIKTSR-GREIRELVPYGLGTHHAGMARSDRNLME 609
Query: 259 EAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS--YVGRD--FISLNMYK--QMVGRAGR 312
+ G L+++CCT+TLA GVNLPA VII+ + Y ++ FI L + Q+ GRAGR
Sbjct: 610 RLFSEGVLKVLCCTATLAWGVNLPAAAVIIKGTQLYSAQEGKFIDLGILDVLQIFGRAGR 669
Query: 313 TGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAANLCSSLED 372
Q++G LC + + S + + EPI S + +L E+ + S E
Sbjct: 670 PQFQDTGIG-FLCTSHNKLQHYLSAVTSQ-EPIESRFSRKLVDNLNAEIALGTVTSVPEA 727
Query: 373 VKTLIKHTLFYQLK 386
V+ L LF +++
Sbjct: 728 VQWLGYSYLFVRMR 741
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 100/381 (26%), Positives = 167/381 (43%), Gaps = 52/381 (13%)
Query: 28 GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILE 87
G P + + I I T EK + S + ++ L++IDE H+L RGPILE
Sbjct: 1223 GDNTPDTKTIRDSDIIITTPEKWDGISRSWQTRGYVRQVSLVIIDEIHLLGS-NRGPILE 1281
Query: 88 CVVSKVLYL----KKSIQIFAMSATIGNINALSTFI---EGITYVENS-RPTKHSEYVT- 138
+VS++ Y+ K ++++ MS N L ++ EG+ +S RP Y+
Sbjct: 1282 IIVSRMNYIASQSKGAVRLLGMSTACANATDLGNWLGVKEGLFNFRHSVRPVPLEIYIDG 1341
Query: 139 -VDKRVF----QSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACS 193
++R F QS + + I PD V++F +S+
Sbjct: 1342 FPEQRGFCPLMQSMNRPTFLAI---------KNHSPDKP---------VIVFVASRRQTR 1383
Query: 194 NLALRLQFDRFPGTKEYKKQ----EKEDLIEALKEENDGKLSTNLEECILYGVAYHHADL 249
A L F G ++ ++ +EDL L D L+E + +G+A HHA L
Sbjct: 1384 LTAKDLI--NFCGMEDNPRRFLHMPEEDLQLNLSRVKD----EALKEALGFGIALHHAGL 1437
Query: 250 TAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYV------GRDFISLNMY 303
+R+L EE + +QI+ TSTLA GVNLPA V+++ + G + L
Sbjct: 1438 VESDRQLSEELFANNKIQILVATSTLAWGVNLPAHLVVVKGTQFFDAKIEGYKDMDLTDV 1497
Query: 304 KQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVA 363
QM+GRAGR SG + + + + + ++ G P+ S + L D + V+
Sbjct: 1498 LQMLGRAGRPQFDTSGIARIFTQGSKKAF-YKHFLHTG-FPVESTLH-KVLHDHLAAEVS 1554
Query: 364 ANLCSSLEDVKTLIKHTLFYQ 384
A ++ +D + T F++
Sbjct: 1555 AGTITTKQDALDYLTWTFFFR 1575
>gi|134114674|ref|XP_774045.1| hypothetical protein CNBH0910 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50256675|gb|EAL19398.1| hypothetical protein CNBH0910 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 1528
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 94/328 (28%), Positives = 157/328 (47%), Gaps = 69/328 (21%)
Query: 60 ENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFI 119
EN + LI+IDE H+L E RG LE V+S++ L + I+ A+SAT+ NI+ ++ ++
Sbjct: 319 ENMSQRLRLIMIDEVHILRE-SRGATLEVVISRLKGLGRGIRFVALSATVPNIDDIARWL 377
Query: 120 EGITYVENSRPTKH----SEYVTVDKRVFQSFDGKSLTEIYA----------DNLDYSLT 165
G T E + ++ E ++ ++ + D + ++Y Y +
Sbjct: 378 -GPTRNEYGQLSRGVLVGREVISAKEKRAPAVDDMPMAKVYKFGEEYRPVPLQRETYGIE 436
Query: 166 GSGPD-AVLHLVQGNLM-----------VLIFCSSKIACSNLA--------------LRL 199
+G D A+ + + L VL+FC ++ +C A L+L
Sbjct: 437 STGNDWALANRLDKELFPILLRHAAGQPVLVFCPTRKSCQATAESIFQSYEEARAKGLKL 496
Query: 200 QFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEE 259
+ PG + E D KL T L C G+A HHA L G+RR IE+
Sbjct: 497 PWQHPPGVR--------------LELQDKKL-TELSTC---GIAVHHAGLDYGDRRAIED 538
Query: 260 AYLAGTLQIICCTSTLAAGVNLPAQRVIIRD--SYVG-----RDFISLNMYKQMVGRAGR 312
+ G L +I TSTLA GVNLPA V+I+ ++ G +++ +++ +QMVGRAGR
Sbjct: 539 GFRDGKLHMIASTSTLAVGVNLPAHTVVIKGVMAWQGASSGFQEYSDIDI-QQMVGRAGR 597
Query: 313 TGLQESGESIMLCKTMQDFLRFSSMMNA 340
SG +++C+ + ++ SM+N+
Sbjct: 598 PQYDTSGVVVVMCERSK-VRKYQSMLNS 624
>gi|15218086|ref|NP_173520.1| putative U5 small nuclear ribonucleoprotein helicase [Arabidopsis
thaliana]
gi|334182730|ref|NP_001185050.1| putative U5 small nuclear ribonucleoprotein helicase [Arabidopsis
thaliana]
gi|4836892|gb|AAD30595.1|AC007369_5 Putative RNA helicase [Arabidopsis thaliana]
gi|332191925|gb|AEE30046.1| putative U5 small nuclear ribonucleoprotein helicase [Arabidopsis
thaliana]
gi|332191926|gb|AEE30047.1| putative U5 small nuclear ribonucleoprotein helicase [Arabidopsis
thaliana]
Length = 2171
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 116/443 (26%), Positives = 203/443 (45%), Gaps = 60/443 (13%)
Query: 33 TKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSK 92
T R++ + I + T EK + + L++IDE H+L++ RGP+LE +V++
Sbjct: 600 TGREIEETQIIVTTPEKWDIITRKSGDRTYTQLVRLLIIDEIHLLHD-NRGPVLESIVAR 658
Query: 93 VLY----LKKSIQIFAMSATIGNINALSTFI-----EGITYVENS-RPTK-HSEYVTVD- 140
L K++I++ +SAT+ N ++ F+ +G+ + S RP H +Y+ +
Sbjct: 659 TLRQIETTKENIRLVGLSATLPNYEDVALFLRVDLKKGLFKFDRSYRPVPLHQQYIGISV 718
Query: 141 KRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRLQ 200
K+ Q F ++L Y +G G VLIF S+ S A ++
Sbjct: 719 KKPLQRFQ-------LMNDLCYQKVLAG--------AGKHQVLIFVHSRKETSKTARAIR 763
Query: 201 FDRFPGTKEYKKQEKEDLI--EALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIE 258
D + KED + + L D +++L++ + YG A HHA L+ G+R ++E
Sbjct: 764 -DTAMANDTLSRFLKEDSVTRDVLHSHEDIVKNSDLKDILPYGFAIHHAGLSRGDREIVE 822
Query: 259 EAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYV-------GRDFISLNMYKQMVGRAG 311
+ G +Q++ T+TLA GVNLPA VII+ + V + L++ QM+GRAG
Sbjct: 823 TLFSQGHVQVLVSTATLAWGVNLPAHTVIIKGTQVYNPEKGAWMELSPLDVM-QMLGRAG 881
Query: 312 RTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAANLCSSLE 371
R + GE I++ + + S+MN PI S L E+V + ++ E
Sbjct: 882 RPQYDQHGEGIIIT-GYSELQYYLSLMNEQ-LPIESQFISKLADQLNAEIVLGTVQNARE 939
Query: 372 DVKTL---------IKHTLFYQLKSPEDQQTFLETTLSEIVASLLASKGTMLTMN----- 417
L +++ Y L +P+ + L E A L+ S T+L N
Sbjct: 940 ACHWLGYTYLYIRMVRNPTLYGL-APD--ALAKDVVLEERRADLIHSAATILDKNNLVKY 996
Query: 418 --EAGHLSLTSIAKAAVQAGLSH 438
++G+ +T + + A ++H
Sbjct: 997 DRKSGYFQVTDLGRIASYYYITH 1019
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/313 (23%), Positives = 141/313 (45%), Gaps = 47/313 (15%)
Query: 37 LNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYL 96
L K I I T EK L Q + ++ L ++DE H++ Q GP+LE +VS++ Y+
Sbjct: 1444 LEKGQIIISTPEKWDALSRRWKQRKYVQQVSLFIVDELHLIGG-QHGPVLEVIVSRMRYI 1502
Query: 97 KKS----IQIFAMSATIGNINALSTFIEG-----ITYVENSRPTKHSEYVT-VDKRVFQS 146
I+I A+S ++ N L +I + RP ++ VD S
Sbjct: 1503 SSQVINKIRIVALSTSLANAKDLGEWIGASSHGLFNFPPGVRPVPLEIHIQGVD---ISS 1559
Query: 147 FDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSK----IACSNLALRLQFD 202
F+ + ++T A++ + ++F ++ + +L D
Sbjct: 1560 FEARM----------QAMTKPTYTAIVQHAKNKKPAIVFVPTRKHVRLTAVDLMAYSHMD 1609
Query: 203 RFPGTKEY---KKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEE 259
P + ++ K +E + +E ++EE L+E + +G+ Y H L++ ++ ++ +
Sbjct: 1610 N-PQSPDFLLGKLEELDPFVEQIREET-------LKETLCHGIGYLHEGLSSLDQEIVTQ 1661
Query: 260 AYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS--YVGR-----DFISLNMYKQMVGRAGR 312
+ AG +Q+ +S+L G L A V++ + Y GR D+ ++ QM+GRA R
Sbjct: 1662 LFEAGRIQVCVMSSSLCWGTPLTAHLVVVMGTQYYDGRENSHSDYPVPDLL-QMMGRASR 1720
Query: 313 TGLQESGESIMLC 325
L +G+ ++ C
Sbjct: 1721 PLLDNAGKCVIFC 1733
>gi|366999410|ref|XP_003684441.1| hypothetical protein TPHA_0B03360 [Tetrapisispora phaffii CBS 4417]
gi|357522737|emb|CCE62007.1| hypothetical protein TPHA_0B03360 [Tetrapisispora phaffii CBS 4417]
Length = 2170
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 111/401 (27%), Positives = 187/401 (46%), Gaps = 50/401 (12%)
Query: 9 LAKAAEEFKFYLEEYAGVK-----GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRI 63
+ + EF+ L Y G+K G ++ Q+N+ I + T EK + +
Sbjct: 576 VQEQVREFQRRLSPY-GIKVSELTGDSNLSRSQINETQILVSTPEKWDIITRKSNDLTYV 634
Query: 64 DEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLK--KSIQIFAMSATIGNINALSTFIEG 121
+ + L++IDE H+L++P RGP++E +VS+ L K+ +I AMSAT+ N ++ F+
Sbjct: 635 NLVDLVIIDEVHLLHDP-RGPVIESIVSRSLIDANIKNPRIMAMSATLPNYKDVAKFLRV 693
Query: 122 ----ITYVENS-RPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLV 176
+ Y +++ RP S Q F G +TE + ++ D VL V
Sbjct: 694 KEPYLFYFDSTFRPCPLS----------QQFCG--ITEKSSIKKISAMNEVCYDKVLESV 741
Query: 177 QGNLMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLI--------EALKEENDG 228
V++F S+ A L+ KE+ K D I E L++E +
Sbjct: 742 TEGHQVIVFVHSRKDTHRTAEYLK-------KEFLKNHLLDKIKKPDAGSKEILRKETET 794
Query: 229 KLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVII 288
++ L++ +G+ HHA L +R L E+ + G LQ++ T+TLA GVNLPA VII
Sbjct: 795 IKNSKLKDLCTFGIGIHHAGLDRSDRSLSEDLFADGLLQVLVSTATLAWGVNLPAHTVII 854
Query: 289 RDSYV------GRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGP 342
+ + V + +S QM+GRAGR G+ I++ T Q +++ +
Sbjct: 855 KGTEVYSPETSKWEKLSAQDVLQMLGRAGRPRYDTHGKGIII--TNQTDIKYYLAVLTNQ 912
Query: 343 EPISSHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFY 383
I S++ + L E+V N+ ++ D K +HT Y
Sbjct: 913 LSIQSYLSEKLVDCLNAEIVLGNVI-NINDAKNWFQHTFLY 952
>gi|70992673|ref|XP_751185.1| DEAD/DEAH box DNA helicase (Mer3) [Aspergillus fumigatus Af293]
gi|66848818|gb|EAL89147.1| DEAD/DEAH box DNA helicase (Mer3), putative [Aspergillus fumigatus
Af293]
Length = 1439
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 97/341 (28%), Positives = 160/341 (46%), Gaps = 34/341 (9%)
Query: 6 YQSLAKA--AEEFKFYLEEY-------AGVKGQYPPTK-RQLNKKSIYICTIEKGSKLIG 55
YQ+ K+ +E F+ + ++ A + G T+ R + I + T EK +
Sbjct: 285 YQAPTKSLCSERFRDWSRKFMSLGLQCAELTGDTDHTQLRSVQNSQIIVTTPEKWDSMTR 344
Query: 56 SLIQENRIDE-IGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINA 114
R+ + + L +IDE H+L E RG LE VVS++ +++ A+SAT+ N
Sbjct: 345 KWKDHARLMQLVKLFLIDEVHILKE-ARGATLEAVVSRMKTFGSNVRFVALSATVPNSED 403
Query: 115 LSTFIEGITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYS-LTGSGPDAVL 173
++ ++ G + P H E+ D R + + Y+++ + L GS VL
Sbjct: 404 IACWL-GKDAMNQHVPA-HREHFGEDFRPVKLQKFVYGYQSYSNDFAFDKLCGSKLPDVL 461
Query: 174 HLVQGNLMVLIFCSSKIACSNLA---LRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKL 230
++IFC ++ +C A RL P + +K K L+ N
Sbjct: 462 GTHSCRKPIMIFCCTRNSCVATAKELARLWSMTNPPARLWKASGKH-----LEAHN---- 512
Query: 231 STNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRD 290
+L ++ GVA+HHA L +R +E YL G + +ICCTSTLA GVNLP VII+
Sbjct: 513 -ADLRTTLMAGVAFHHAGLDPADRHTVESGYLQGHIAVICCTSTLAVGVNLPCYLVIIKG 571
Query: 291 SYVGRD-----FISLNMYKQMVGRAGRTGLQESGESIMLCK 326
+ +D + L M QM+GRAGR +S ++++ +
Sbjct: 572 TVGWQDGGCKEYSDLEMM-QMLGRAGRPQFDDSAIAVIMTR 611
>gi|332022731|gb|EGI63007.1| Putative U5 small nuclear ribonucleoprotein 200 kDa helicase
[Acromyrmex echinatior]
Length = 2115
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 106/395 (26%), Positives = 183/395 (46%), Gaps = 78/395 (19%)
Query: 28 GQYPPTKRQLNKKSIYICTIEK--------GSKLIGSLIQENRIDEIGLIVIDEFHMLNE 79
G + T+ Q+ + +CT EK G K SL++ LI+IDE H+L++
Sbjct: 565 GDHQLTREQIAATQVIVCTPEKWDIITRKGGEKTFTSLVR--------LIIIDEIHLLHD 616
Query: 80 PQRGPILECVVSKVLY----LKKSIQIFAMSATIGNINALSTFIE-----GITYVENS-R 129
+RGP+LE +V++ + ++ +++ +SAT+ N ++ F+ G+ Y +NS R
Sbjct: 617 -ERGPVLEALVARTIRNIETTQEDVRLVGLSATLPNYQDVAAFLRIKPETGLFYFDNSFR 675
Query: 130 PTK-HSEYVTV-DKRVFQSFDGKSLTEI-YADNLDYSLTGSGPDAVLHLVQGNLMVLIFC 186
P +Y+ V +K+ + F + + EI Y ++++ G VLIF
Sbjct: 676 PVALEQQYIGVTEKKALKRF--QVMNEIVYEKTMEHA--------------GRNQVLIFV 719
Query: 187 SSKIACSNLALRL-----------QFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLE 235
S+ A + QF R E +E L+ E + + L+
Sbjct: 720 HSRKETGKTARAIRDMCLEKDTLGQFLR----------EGSASMEVLRTEAEQVKNQELK 769
Query: 236 ECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYV-- 293
+ + YG A HHA +T +R L+E+ + +Q++ T+TLA GVNLPA VII+ + V
Sbjct: 770 DLLPYGFAIHHAGMTRVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQVYN 829
Query: 294 ---GRDFISLNMYK--QMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSH 348
GR ++ L QM+GRAGR GE I++ + + S++N PI S
Sbjct: 830 PEKGR-WVELGALDVLQMLGRAGRPQYDTKGEGILIT-NHSELQYYLSLLNQQL-PIESQ 886
Query: 349 MDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFY 383
+ + D++ V ++ D T + +T Y
Sbjct: 887 L-ISKMSDMLNAEVVLGTIQNIRDAVTWLGYTYLY 920
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 86/331 (25%), Positives = 150/331 (45%), Gaps = 37/331 (11%)
Query: 37 LNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLY- 95
L K I I T +K L Q + I L ++DE ++ + GP+LE S+ Y
Sbjct: 1394 LAKGQIIITTADKWDVLSRRWKQRKNVQNIQLFIVDELQLIG-GEEGPVLEVACSRARYI 1452
Query: 96 ---LKKSIQIFAMSATIGNINALSTFIEGITYVE-NSRPTKHSEYVTVDKRVFQSFDGKS 151
L K +I A+SA++ + + ++ N PT V ++ V G +
Sbjct: 1453 SSQLDKPTRIIALSASLADAKDAAQWLGAPAAATFNFHPTVRP--VPLELHV----QGIN 1506
Query: 152 LTEIYADNLDYSLTGSGP--DAVL-HLVQGNLMVLIFCSSKIACSNLALRLQFDRFPGT- 207
+T N + P +A+L H ++V + + + + L L F G
Sbjct: 1507 VTH----NASRLAAMAKPVYNAILRHAAHKPVIVFVPTRRQARLTAIDL-LTFTAAEGQP 1561
Query: 208 KEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQ 267
+ E+ D+ L +D L+E + GVAY H L+A +RRL+E+ + +G +Q
Sbjct: 1562 SRFFHAEEADIKPFLDRMSD----KTLKETLSQGVAYLHEGLSADDRRLVEQLFDSGAIQ 1617
Query: 268 IICCTSTLAAGVNLPAQRVIIRDS--YVGR-----DFISLNMYKQMVGRAGRTGLQESGE 320
+ T L G+++ + V++ D+ Y G+ D+ ++ QMV RA R E +
Sbjct: 1618 VAVATRDLCWGLSISSHLVVVMDTQCYNGKTHAYEDYPITDVL-QMVARANRPLEDEDAK 1676
Query: 321 SIMLCK-TMQDFLRFSSMMNAGPEPISSHMD 350
++LC+ + +DF F +N P P+ SH+D
Sbjct: 1677 CVLLCQSSKKDF--FKKFLNE-PLPVESHLD 1704
>gi|156540980|ref|XP_001599298.1| PREDICTED: putative U5 small nuclear ribonucleoprotein 200 kDa
helicase-like [Nasonia vitripennis]
Length = 2129
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 105/395 (26%), Positives = 184/395 (46%), Gaps = 78/395 (19%)
Query: 28 GQYPPTKRQLNKKSIYICTIEK--------GSKLIGSLIQENRIDEIGLIVIDEFHMLNE 79
G + T+ Q++ I +CT EK G K SL++ LI++DE H+L++
Sbjct: 561 GDHQLTREQISSTQIIVCTPEKWDVITRKGGEKTFTSLVR--------LIIVDEIHLLHD 612
Query: 80 PQRGPILECVVSKVLY----LKKSIQIFAMSATIGNINALSTFIE-----GITYVENS-R 129
+RGP+LE +V++ L ++ +++ +SAT+ N ++ F+ G+ Y +NS R
Sbjct: 613 -ERGPVLESLVARTLRNIETTQEDVRLVGLSATLPNYEDVAAFLRVKPATGLYYFDNSFR 671
Query: 130 PTK-HSEYVTV-DKRVFQSFDGKSLTEI-YADNLDYSLTGSGPDAVLHLVQGNLMVLIFC 186
P +Y+ V +K+ + F + + E+ Y ++++ G VLIF
Sbjct: 672 PVSLEQQYIGVTEKKALKRF--QVMNEVVYEKTMEHA--------------GKNQVLIFV 715
Query: 187 SSKIACSNLALRL-----------QFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLE 235
S+ A + QF R E +E L+ E + + L+
Sbjct: 716 HSRKETGKTARAIRDMCLEKDSLGQFLR----------EGSASMEVLRTEAEQVKNMELK 765
Query: 236 ECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYV-- 293
+ + YG A HHA +T +R L+E+ + +Q++ T+TLA GVNLPA VII+ + V
Sbjct: 766 DLLPYGFAIHHAGMTRVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQVYN 825
Query: 294 ---GRDFISLNMYK--QMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSH 348
GR ++ L QM+GRAGR GE I++ + + S++N PI S
Sbjct: 826 PEKGR-WVELGALDVLQMLGRAGRPQYDTKGEGILIT-NHSELQYYLSLLNQQL-PIESQ 882
Query: 349 MDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFY 383
+ + D++ + ++ D T + +T Y
Sbjct: 883 L-VSKMPDMMNAEIVLGTIQNVRDAVTWLGYTYLY 916
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 89/369 (24%), Positives = 158/369 (42%), Gaps = 46/369 (12%)
Query: 37 LNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLY- 95
L K I I T +K L Q + I L +IDE ++ + GP+LE S+ Y
Sbjct: 1408 LAKAQIIITTADKWDVLSRRWKQRKNVQNIQLFIIDELQLIG-GEEGPVLEVACSRARYI 1466
Query: 96 ---LKKSIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSFDGKSL 152
L K +I A+SA++ + ++ ++ + FQ+
Sbjct: 1467 SSQLDKPTRIVALSASLADAKDVAQWLGAPAAATFN---------------FQTSVRPIP 1511
Query: 153 TEIYADNLDYSLTGSGPDAVLHLVQGNLM-------VLIFCSSKIACSNLALR-LQFDRF 204
E++ ++ + S A+ V ++ +IF ++ A L F
Sbjct: 1512 LELHVQGINITHNASRLAAMAKPVYNAILRHALRKPAIIFVPTRKQARLTAFEILTFTAA 1571
Query: 205 PGTK-EYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLA 263
G ++ E+ D+ L +D L+E + GVAY H L+A +RRL+E+ + +
Sbjct: 1572 EGKPTQFFHAEESDIKPFLDRMSD----KTLKETLAQGVAYLHEGLSANDRRLVEQLFDS 1627
Query: 264 GTLQIICCTSTLAAGVNLPAQRVIIRDS--YVGR-----DFISLNMYKQMVGRAGRTGLQ 316
G +QI CT L +++ A V++ D+ Y G+ D+ ++ QMV RA R
Sbjct: 1628 GAIQIAVCTRDLCWSLSIYAYLVVVMDTQCYNGKTHAYEDYPVTDVL-QMVSRANRPQED 1686
Query: 317 ESGESIMLCK-TMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKT 375
+ + ++LC+ + +DF + M P P+ SH+D EVV + + +D
Sbjct: 1687 DDSKCVLLCQSSKKDFFKKFLM---EPLPVESHLDHRLHDHFNAEVVTKTI-ENKQDAVD 1742
Query: 376 LIKHTLFYQ 384
+ TL Y+
Sbjct: 1743 YLTWTLLYR 1751
>gi|340506800|gb|EGR32869.1| hypothetical protein IMG5_068460 [Ichthyophthirius multifiliis]
Length = 2798
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 95/329 (28%), Positives = 169/329 (51%), Gaps = 45/329 (13%)
Query: 23 YAGVK-----GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDE-IGLIVIDEFHM 76
Y G+K G +K+++ + I I T EK ++N + E + L++IDE H+
Sbjct: 556 YLGIKCRELTGDMQMSKKEIEETQIIITTPEKWDVFTR---KKNEVAETLKLLIIDEIHL 612
Query: 77 LNEPQRGPILECVVSKVLY----LKKSIQIFAMSATIGNINALSTFI----EGITYVENS 128
LN+ +RGP+LEC+VS+ L +K++++ +SAT+ N +++F+ E + + + S
Sbjct: 613 LND-ERGPVLECLVSRTLQNIERQQKTVRMLGLSATLPNYLDVASFLHVKKESVFFFDAS 671
Query: 129 -RPTK-HSEYVTVDKRVFQSFD-GKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIF 185
RP Y+ V + SF + +IY + L Y+++ +++ VLIF
Sbjct: 672 YRPVPLMQRYIGVREPKQTSFKIRRKKIDIYNE-LTYTISKG-------VLEHKKQVLIF 723
Query: 186 CSSK---IACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGV 242
S+ I L++ DR ++ + + ++++ KL+ YG+
Sbjct: 724 VHSRKETIVTGQYLLKMAQDRNELHLMKSLEKDKHTLPKIQDKELTKLAP-------YGI 776
Query: 243 AYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYV------GRD 296
+HHA + +R L+E+ +L G L+I+C T+TLA GVNLPA VII+ + V G
Sbjct: 777 GFHHAGMLRKDRNLVEKMFLDGNLRILCATATLAWGVNLPAYSVIIKGTDVIDPSRGGTQ 836
Query: 297 FISLNMYKQMVGRAGRTGLQESGESIMLC 325
+S+ +QM GRAGR ++GE ++
Sbjct: 837 DLSVLDIQQMFGRAGRPQFDQNGEVTLIT 865
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 102/397 (25%), Positives = 181/397 (45%), Gaps = 58/397 (14%)
Query: 28 GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILE 87
G + P L K + + T EK + S + L++ DE H+L + RGP+LE
Sbjct: 1461 GDFTPDLESLLKADVVVTTPEKWDGISRSWSNREYVKNTALVIFDEIHLLGQ-DRGPVLE 1519
Query: 88 CVVSKVLYL----KKSIQIFAMSATIGNINALSTFIEGIT--YVENSRPTKHSEYVTVDK 141
+VS++ + + I++ +S + N ++ + G+ Y N RP H V + K
Sbjct: 1520 VIVSRMNLVSSRTQHKIRMVGLSTAMANGTDVADWF-GVPRFYFFNFRP--HVRPVPL-K 1575
Query: 142 RVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRL-- 199
F F K+ A+ + ++ + VL+F SS+ AL L
Sbjct: 1576 IYFDGFSAKAYCPRMAE-----MNKPAFQSIRKYGEKK-PVLVFVSSRRQTRLTALDLIA 1629
Query: 200 -----QFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGER 254
Q + P + E +E +K+E L++ + +GV HHA L ++
Sbjct: 1630 HAMHEQCGQCPFVM-CSEDELSAYLELIKDEF-------LKQTLAFGVGMHHAGLQQEDK 1681
Query: 255 RLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYV----GRDFISLNMYK--QMVG 308
+++EE +L +Q++ T+TLA GVNLPA+ VII+ + + ++ + + QM+G
Sbjct: 1682 KIVEELFLNQKIQVLIATATLAWGVNLPARLVIIKGTEYFDSKSKKYVDMPVTDILQMIG 1741
Query: 309 RAGRTGLQESGES-IMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAANLC 367
RAGR + G + + + ++ ++F R +N P PI S +L+ I + A +
Sbjct: 1742 RAGRPQFDDQGIACVFVEQSKKNFYR--KYLN-DPFPIES-----SLISQIHDHFNAEIS 1793
Query: 368 SSLEDVK----TLIKHTLFYQ--LKSP-----EDQQT 393
S + K I T F++ LK+P E+Q+T
Sbjct: 1794 SGTIETKQQCMDWITWTYFFRRMLKNPTYYNLENQET 1830
>gi|356556951|ref|XP_003546783.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
[Glycine max]
Length = 2183
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 127/476 (26%), Positives = 221/476 (46%), Gaps = 65/476 (13%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V E +L+ +++ + E +G + T++Q+ + I + T EK +
Sbjct: 583 LVAEVVGNLSNRLQDYDVKVRELSGDQSL---TRQQIEETQIIVTTPEKWDIITRKSGDR 639
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLY----LKKSIQIFAMSATIGNINALS 116
+ L++IDE H+L++ RGP+LE +V++ + K I++ +SAT+ N ++
Sbjct: 640 TYTQLVKLLIIDEIHLLHD-NRGPVLESIVARTVRQIETTKDYIRLVGLSATLPNYEDVA 698
Query: 117 TFI-----EGITYVENS-RPTKHSE-YVTVD-KRVFQSFDGKSLTEIYADNLDYSLTGSG 168
F+ +G+ Y +NS RP S+ YV + K+ Q F + + +I + +
Sbjct: 699 LFLRVDLKKGLFYFDNSYRPVPLSQQYVGITVKKPLQRF--QLMNDICYEKV-------- 748
Query: 169 PDAVLHLVQGNLMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLI--EALKEEN 226
V G VLIF S+ + A ++ D + KED E L
Sbjct: 749 -----MAVAGKHQVLIFVHSRKETAKTARAIR-DTALANDTLGRFLKEDSASREILHTHT 802
Query: 227 DGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRV 286
D S +L++ + YG A HHA +T +R+L+E+ + G +Q++ T+TLA GVNLPA V
Sbjct: 803 DLVKSNDLKDLLPYGFAIHHAGMTRTDRQLVEDLFADGHVQVLVSTATLAWGVNLPAHTV 862
Query: 287 IIRDSYV-------GRDFISLNMYKQMVGRAGRTGLQESGESIMLC--KTMQDFLRFSSM 337
II+ + + + L++ QM+GRAGR GE I++ +Q +L S+
Sbjct: 863 IIKGTQIYNPEKGAWTELSPLDVM-QMLGRAGRPQYDSYGEGIIVTGHSELQYYL---SL 918
Query: 338 MNAGPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFY--QLKSPE------ 389
MN PI S L E+V + ++ E I +T Y L++P
Sbjct: 919 MNQQ-LPIESQFVSKLADQLNAEIVLGTVQNAREAC-NWIGYTYLYVRMLRNPSLYGIAP 976
Query: 390 DQQTFLETTLSEIVASLLASKGTMLTMN-------EAGHLSLTSIAKAAVQAGLSH 438
D T + TL E A L+ + T+L N ++G+ +T + + A ++H
Sbjct: 977 DVLT-RDITLEERRADLIHTAATILDRNNLVKYDRKSGYFQVTDLGRIASYYYITH 1031
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 83/346 (23%), Positives = 153/346 (44%), Gaps = 48/346 (13%)
Query: 7 QSLAKAAEEFKFYLEEYAG--------VKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLI 58
+SLAK E ++ + +++ G + G+ + L K I I T EK L
Sbjct: 1420 ESLAK--ERYRDWEKKFGGGLKLRVVELTGETATDLKLLEKGQIIISTPEKWDALSRRWK 1477
Query: 59 QENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYL----KKSIQIFAMSATIGNINA 114
Q + ++ L +IDE H++ Q GPILE VVS++ Y+ + I++ A+S ++ N
Sbjct: 1478 QRKHVQQVSLFIIDELHLIGG-QGGPILEVVVSRMRYIASQVENKIRVVALSTSLANAKD 1536
Query: 115 LSTFIEGIT-----YVENSRPTKHSEYVT-VDKRVFQSFDGKSLTEIYADNLDYSLTGSG 168
L +I + + RP ++ +D +F+ + ++T
Sbjct: 1537 LGEWIGATSHGLFNFPPGVRPVPLEIHIQGID---IANFEARM----------QAMTKPT 1583
Query: 169 PDAVLHLVQGNLMVLIFCSSK--IACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEEN 226
A++ + L+F ++ + + + L G K + + E+L L +
Sbjct: 1584 YTAIVQHAKNGKPALVFVPTRKHVRLTAVDLITYSGADSGEKPFLLRSAEELEPFLDKIT 1643
Query: 227 DGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRV 286
D L L E GV Y H L + +R ++ + + AG +Q+ S++ GV L A V
Sbjct: 1644 DEMLKVTLRE----GVGYLHEGLNSLDRDIVTQLFEAGWIQVCVLNSSMCWGVTLSAHLV 1699
Query: 287 IIRDS--YVGR-----DFISLNMYKQMVGRAGRTGLQESGESIMLC 325
++ + Y GR D+ ++ QM+G A R + SG+ ++LC
Sbjct: 1700 VVMGTQYYDGRENAQTDYPVTDLL-QMMGHASRPLVDNSGKCVILC 1744
>gi|70983506|ref|XP_747280.1| pre-mRNA splicing helicase [Aspergillus fumigatus Af293]
gi|66844906|gb|EAL85242.1| pre-mRNA splicing helicase, putative [Aspergillus fumigatus Af293]
gi|159123715|gb|EDP48834.1| pre-mRNA splicing helicase, putative [Aspergillus fumigatus A1163]
Length = 2209
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 122/478 (25%), Positives = 225/478 (47%), Gaps = 53/478 (11%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V E+ +L K E + + E G + TK+Q+ + + + T EK + +
Sbjct: 600 LVQEQVGNLGKRLEPYGIRVSELTGDRQL---TKQQIAETQLIVTTPEKFDVITRKASET 656
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVS----KVLYLKKSIQIFAMSATIGNINALS 116
+ I + LI+IDE H+L++ +RGP++E +VS KV + ++I +SAT+ N ++
Sbjct: 657 SYIKLVRLIIIDEIHLLHD-ERGPVIESIVSRTIRKVEQTGEPVRIVGLSATLPNYRDVA 715
Query: 117 TFI-----EGITYVENS-RPTK-HSEYVTV-DKRVFQSFDGKSLTEIYADNLDYSLTGSG 168
+F+ +G+ + + S RP E++ V DK+ + K + +I + +
Sbjct: 716 SFLRVDPNKGLFHFDGSYRPCPLKQEFIGVTDKKAIKQL--KMMNDICYNKV-------- 765
Query: 169 PDAVLHLVQGNLMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEA--LKEEN 226
+ + Q +LIF S+ + A ++ D+ + + + D L EE
Sbjct: 766 ---LEQVGQRRNQMLIFVHSRKETAKTAKYIR-DKALEMETIGQILRSDAASRAILAEEA 821
Query: 227 DGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRV 286
+ +L++ + YG HHA L+ +R ++ + G++Q++ CT+TLA GVNLPA V
Sbjct: 822 ESVDDASLKDLLPYGFGIHHAGLSLADRDSVQALFADGSIQVLVCTATLAWGVNLPAHTV 881
Query: 287 IIRDSYV----GRDFISLNMYK--QMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNA 340
II+ + V ++ L+ QM+GRAGR GE I++ + + + S+MN
Sbjct: 882 IIKGTQVYSPEKGSWVELSPQDVLQMLGRAGRPQYDTFGEGIIIT-SQTEIQYYLSLMNQ 940
Query: 341 GPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQ-LKSPE--------DQ 391
PI S + ++ E+V N+ + E V+ L LF + L+SP +
Sbjct: 941 Q-LPIESQLMSKLADNMNAEIVLGNIRNRDEGVEWLGYTYLFVRMLRSPGLYSVGADYEN 999
Query: 392 QTFLETTLSEIV---ASLLASKGTMLTMNEAGHLSLTSIAKAAVQAGLSHDVCLIIYS 446
LE ++V A +L G + + G L T + + A + H+ ++ YS
Sbjct: 1000 DDALEQKRVDLVHSAAVILERAGLVKYEKKTGRLQSTELGRIASHYYIGHN-SMLTYS 1056
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 90/414 (21%), Positives = 176/414 (42%), Gaps = 58/414 (14%)
Query: 37 LNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKV--- 93
L++ + + T + L + + + L + DE HML G + E VVS++
Sbjct: 1476 LDQADLVLATPTQWDVLSRQWQRRKNVQSVQLFIADELHMLGG-YGGYVYEVVVSRMHSI 1534
Query: 94 -LYLKKSIQIFAMSATIGNINALSTFIEGITY-VENSRPTKHSEYVTVDKRVFQSFD--- 148
L L+ ++I +S + N + +I + + N P H+ V ++ + QSF
Sbjct: 1535 ALQLENGMRIVGLSVPLANARDIGEWIGANKHTIYNFSP--HARPVPLELHI-QSFSIPH 1591
Query: 149 GKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRL--------Q 200
SL A +S+ PD L+F ++ + A+ L
Sbjct: 1592 FPSLMLAMAKPAYHSILQLAPDKP---------ALVFVPNRKQTRSTAIDLLAACAADDN 1642
Query: 201 FDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEA 260
DRF E L+ ++E L E + +G+ Y+H L+A ++R++
Sbjct: 1643 EDRF---LHADVNELAPLLNRIQER-------TLAESLSHGIGYYHEALSATDKRIVSHL 1692
Query: 261 YLAGTLQIICCTSTLAAGVNLPAQRVIIRDS--YVGRD--FISLNMYK--QMVGRAGRTG 314
+ G +Q++ + + +NL A VII + + GR+ +I + + QM G+A R
Sbjct: 1693 FTIGAIQVLLASRDVCWDLNLTAHLVIIMGTQFFEGREHRYIDYPISEVLQMFGKATRPK 1752
Query: 315 LQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAANLCSSLEDVK 374
+ G +++ +++ + +N P+ SH+ L D + ++ +S +D
Sbjct: 1753 EDKIGRGVLMVPSVKREY-YKKFLNEA-LPVESHLQ-LYLHDAFVTEISTRTITSTQDAV 1809
Query: 375 TLIKHTLFYQ--LKSP------EDQQTFLETTLSEIVASLLA--SKGTMLTMNE 418
+ +T FY+ L +P + L T LSE+V + L S+ ++ ++E
Sbjct: 1810 DWMTYTYFYRRLLANPSFYGLSDISHEGLSTFLSELVENTLRELSEAKIIDLDE 1863
>gi|209882713|ref|XP_002142792.1| DEAD/DEAH box helicase family protein [Cryptosporidium muris RN66]
gi|209558398|gb|EEA08443.1| DEAD/DEAH box helicase family protein [Cryptosporidium muris RN66]
Length = 1139
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 125/475 (26%), Positives = 212/475 (44%), Gaps = 79/475 (16%)
Query: 182 VLIFCSSKIACSNLAL-------RLQFDRFPGTKEYK------------KQEKEDLIEAL 222
VL+FC SK + AL + +D TK + + E+ LI+ L
Sbjct: 397 VLVFCPSKYSVETTALFYTRCLSKKVYDNIDITKISRINLINNDMIKRIEYERLQLIKEL 456
Query: 223 KEENDGKLSTN---LEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGV 279
++ + +TN L ECI G+AYHH+ L+ ER ++E+ Y G++ ++ TSTLAAGV
Sbjct: 457 QKYHKKSKNTNINILYECISKGIAYHHSGLSHTERNIVEKGYRNGSILLLTATSTLAAGV 516
Query: 280 NLPAQRVIIRDSYVGRDFISLNMYKQMVGRAGRTGLQE-SGESIMLCK-TMQDFLRFSSM 337
NLP++RVI R +G+ F++ YKQM GRAGR G + GES +L ++F + +
Sbjct: 517 NLPSKRVIFRGISIGKSFLTSAEYKQMSGRAGRAGQRGIYGESFILINYKTEEFSKTLEL 576
Query: 338 MNAGPEPISSHM--DPPTLVDLILEVV---AANLCSSLEDV--KTLIKHTLFYQLKS--- 387
M + P+ S + L LILE++ ++N+ ++ T I+ L LK
Sbjct: 577 MTSDLLPLKSTFITNINGLARLILELITSLSSNIAQFTNNIYNYTHIRVNLLEMLKECIL 636
Query: 388 -PEDQQT--FLETTLSEIVASLLASKGTMLTMNEAGHLSL------TSIAKAAVQAGLSH 438
P Q+ ++ S++++ LL ++ + +E+ T + +A AGLS
Sbjct: 637 MPFQIQSKNYIHDLFSKVLSLLLNNRMIVKYNSESFKFGFTLDYMCTDLGRAVATAGLSP 696
Query: 439 DVCLIIYSDLLHNKLNFCLLNSLHMLFLVIPLE---------------------YRI--P 475
+Y +L F + + + + ++V P Y I P
Sbjct: 697 SNGYELYLELKKANSQFLIESPIFLTYMVTPFPPNNESISINNNKTQNTYSYSYYNINWP 756
Query: 476 SDGILLSRSKVYDRYT----KFHPQTLRVAEALGVTENLVALNVTGKLKDEKKALLCRFF 531
+ +L RS + + Y+ F Q + G T N+ +LKD+++ + F
Sbjct: 757 NLYEILCRSTLKEHYSIKKLGFDIQIVGHVSQKGET------NLPCQLKDKQRYRRYQRF 810
Query: 532 HACILYDVL--NFDNHQKVAKMYGIQNSHLQNFLNVTSYFASKVYRFCEELPELW 584
+A +L L Q + G+ NS +Q L T ++ FC +L W
Sbjct: 811 YASLLLSSLIRGVPIKQIINCFQGVTNSDIQQLLTSTITMSNSCIIFCRKL-NWW 864
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 68/115 (59%), Gaps = 11/115 (9%)
Query: 42 IYICTIEKGSKLIGSLIQ-ENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKK-- 98
I + TIEK + LI + I+ E D +G+I+IDE H+L + QRG ILE +++K+ L +
Sbjct: 162 IGVATIEKANSLINAYIEREILFDRLGIIIIDELHLLGDEQRGYILEVILTKIRLLSRIN 221
Query: 99 --------SIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQ 145
IQI MSAT+ N++++ +++ + Y N RP EY+ +D ++Q
Sbjct: 222 KDILNNSNYIQIVGMSATLPNLSSIGYWLDAVVYQTNFRPVPLREYIVIDGIIYQ 276
>gi|157137365|ref|XP_001657040.1| ATP-dependent DNA helicase mer3 [Aedes aegypti]
gi|108880881|gb|EAT45106.1| AAEL003583-PA [Aedes aegypti]
Length = 563
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 90/307 (29%), Positives = 148/307 (48%), Gaps = 54/307 (17%)
Query: 21 EEYAGVKGQYPPTK---------------RQLNKKSIYICTIEKGSKLIGSLIQE-NRID 64
E++A KG++ P L ++ + T EK + + Q N +
Sbjct: 120 EKFADWKGKFEPLGVKTAEVTGDTEMKDFWDLPDCNLILTTPEKWNSITRRWRQNVNFVR 179
Query: 65 EIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQ-------------IFAMSATIGN 111
I L++IDE H+LN+ RGP+LE VVS++ + + ++ I A+SAT N
Sbjct: 180 MIRLVMIDEVHILNDQYRGPVLEAVVSRMRSIHRFVEGDGGESAVVDPMRIIALSATAPN 239
Query: 112 INALSTFI-EGITYV-----ENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYAD-NLDYSL 164
+ L+ ++ E T E+ RP K +DK V + S + D NL+Y L
Sbjct: 240 VADLAAWVGEANTTCFYNISESRRPIK------IDKHVLGYYCDPSTSPFRFDMNLNYKL 293
Query: 165 TGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKE 224
V+ L+FCS++ A + + L +++ + D + AL+
Sbjct: 294 F-----EVICKYSSGRPSLVFCSTRKATESASKHL-------VEQHSLRLTPDQVSALQV 341
Query: 225 ENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQ 284
+ + +L+ +L GV YHHA L+ +R+LIE+A+ AG + ++CCTS LA GVNLPA
Sbjct: 342 VANQLQNGDLKRRLLAGVGYHHAGLSIADRQLIEDAFRAGRIPVLCCTSGLAMGVNLPAH 401
Query: 285 RVIIRDS 291
VII+ +
Sbjct: 402 LVIIKST 408
>gi|270002717|gb|EEZ99164.1| hypothetical protein TcasGA2_TC016163 [Tribolium castaneum]
Length = 2421
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 110/396 (27%), Positives = 189/396 (47%), Gaps = 68/396 (17%)
Query: 28 GQYPPTKRQLNKKSIYICTIEK--------GSKLIGSLIQENRIDEIGLIVIDEFHMLNE 79
G + T+ Q+ I +CT EK G K SL++ LI+IDE H+L++
Sbjct: 566 GDHQLTREQIAGTQIIVCTPEKWDIITRKGGEKTFTSLVR--------LIIIDEIHLLHD 617
Query: 80 PQRGPILECVVSKVLYLKKSIQ----IFAMSATIGNINALSTFIE-----GITYVENS-R 129
+RGP+LE +V++ + + +S Q + +SAT+ N ++ F+ G+ Y +NS R
Sbjct: 618 -ERGPVLEALVARTIRMIESTQEDVRLVGLSATLPNYQDVAAFLRVKSDTGLFYFDNSFR 676
Query: 130 PTK-HSEYVTV-DKRVFQSFDGKSLTEI-YADNLDYSLTGSGPDAVLHLVQGNLMVLIFC 186
P +Y+ V +K+ + + + + EI Y ++++ G VLIF
Sbjct: 677 PVALEQQYIGVTEKKALKRY--QVMNEIVYEKTMEHA--------------GRNQVLIFV 720
Query: 187 SSKIACSNLA-----LRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYG 241
S+ A + L+ D ++ K E +E L+ E + + L++ + YG
Sbjct: 721 HSRKETGKTARAIRDMCLEKDTL---GQFLK-EGSASMEVLRTEAEQVKNHELKDLLPYG 776
Query: 242 VAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYV-----GRD 296
A HHA +T +R L+E+ + +Q++ T+TLA GVNLPA VII+ + + GR
Sbjct: 777 FAIHHAGMTRVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGR- 835
Query: 297 FISLNMYK--QMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTL 354
++ L QM+GRAGR GE I++ + + S++N PI S M L
Sbjct: 836 WVELGALDVLQMLGRAGRPQYDTRGEGILIT-NHSELQYYLSLLNQQL-PIESQM-ISKL 892
Query: 355 VDLILEVVAANLCSSLEDVKTLIKHTLFY--QLKSP 388
D++ + ++ D T + +T Y L+ P
Sbjct: 893 SDMLNAEIVLGTVQNVRDAVTWLGYTYLYIRMLRQP 928
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 157/335 (46%), Gaps = 45/335 (13%)
Query: 37 LNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYL 96
L K I I T EK L Q + + L ++DE H++ + GP++E V S++ Y+
Sbjct: 1414 LAKGQIVISTAEKWDVLSRRWKQRKNVQNVNLFIVDELHLIG-GEDGPVIEVVCSRMRYI 1472
Query: 97 ----KKSIQIFAMSATIGNINALSTFI-----EGITYVENSRPTKHSEYVTVDKRVFQSF 147
+K I+I A+SA++ + +S ++ + + RP +V
Sbjct: 1473 SSQIEKPIRIIALSASLMDYRDVSQWLGCNANATFNFHPSVRPVPLELHV---------- 1522
Query: 148 DGKSLTEIYADNLDYSLTGSGP--DAVLHLVQGNLMVLIFCSSKIACSNLALRL-QFDRF 204
G ++T N + + P +AV+ + V++F ++ A+ L +
Sbjct: 1523 QGINITH----NASRLIAMAKPVYNAVVRY-SPHKPVIVFVPTRKQSRLTAIDLLTYAAS 1577
Query: 205 PG-TKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLA 263
G + ++ E+ED+ L D L+E + GVAY H LTA + RL+E+ + +
Sbjct: 1578 EGQSNKFFHAEEEDIKPFLDRMTD----KTLKETLSQGVAYMHEGLTASDLRLVEQLFDS 1633
Query: 264 GTLQIICCTSTLAAGVNLPAQRVIIRDS--YVGR-----DFISLNMYKQMVGRAGRTGLQ 316
G +QI + L VN+ + VII D+ Y G+ D+ ++ QMVGRA R
Sbjct: 1634 GAVQIAVVSKDLCWTVNIYSYLVIIMDTQFYNGKVHSYEDYPITDVL-QMVGRANRPLED 1692
Query: 317 ESGESIMLCK-TMQDFLRFSSMMNAGPEPISSHMD 350
+ + +++C+ T +DF F ++ P P+ SH+D
Sbjct: 1693 DDAKCVLMCQSTKKDF--FKKFLSE-PLPVESHLD 1724
>gi|303321474|ref|XP_003070731.1| DEAD/DEAH box helicase domain containing protein [Coccidioides
posadasii C735 delta SOWgp]
gi|240110428|gb|EER28586.1| DEAD/DEAH box helicase domain containing protein [Coccidioides
posadasii C735 delta SOWgp]
Length = 2213
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 122/475 (25%), Positives = 220/475 (46%), Gaps = 54/475 (11%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V E+ + K E + + E G + TK+Q+ + + + T EK +
Sbjct: 605 LVQEQVGNFGKRLEPYGIKVSELTGDRQL---TKQQIAETQVIVTTPEKWDIITRKATDT 661
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKS----IQIFAMSATIGNINALS 116
+ + L++IDE H+L++ RGP+LE +VS+ + + +++ +SAT+ N +
Sbjct: 662 SYTRLVRLVIIDEIHLLHD-DRGPVLESIVSRTIRRTEQTGDPVRLVGLSATLPNYRDVG 720
Query: 117 TF-----IEGITYVENS-RPTK-HSEYVTV-DKRVFQSFDGKSLTEIYADNLDYSLTGSG 168
+F I G+ + + S RP E++ V +K+ + K++ ++ +
Sbjct: 721 SFLRVDPISGLFHFDGSYRPCPLKQEFIGVTEKKAIKQL--KTMNDVCYNK--------- 769
Query: 169 PDAVLHLVQGNL-MVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEA--LKEE 225
VL V N +LIF S+ + A R D+ + + + D L EE
Sbjct: 770 ---VLEQVGTNKNQMLIFVHSRKDTAKTA-RYIRDKAVEMETIGQILRSDAASRAILAEE 825
Query: 226 NDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQR 285
+ +L++ + YG HHA ++ +R +E+ + G+LQ++ CT+TLA GVNLPA
Sbjct: 826 AESVNDPSLKDLMPYGFGIHHAGMSKVDRTSVEDLFADGSLQVLVCTATLAWGVNLPAHT 885
Query: 286 VIIRDSYV----GRDFISLNMYK--QMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMN 339
VII+ + V ++ L+ QM+GRAGR GE I++ T + + S++N
Sbjct: 886 VIIKGTQVYSPEKGSWVELSPQDVLQMLGRAGRPQYDSFGEGIIIT-TQGELQYYLSLLN 944
Query: 340 AGPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQ-LKSP---------E 389
PI S + +L EVV N+ S E V+ L LF + L+SP E
Sbjct: 945 QQ-LPIESQLMSKLADNLNAEVVLGNVRSRDEGVEWLGYTYLFVRMLRSPGLYSVGADYE 1003
Query: 390 DQQTFLETTLSEI--VASLLASKGTMLTMNEAGHLSLTSIAKAAVQAGLSHDVCL 442
+ + + I A++L + G + ++G L T + + A ++H+ L
Sbjct: 1004 GDEALEQRRVDLIHSAATVLGNAGLVKYDKQSGKLQSTELGRIASHYYITHNSML 1058
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 75/353 (21%), Positives = 158/353 (44%), Gaps = 45/353 (12%)
Query: 53 LIGSLIQENR-IDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYL----KKSIQIFAMSA 107
++ L Q + + + L++ DE HML Q G + E VVS++ Y+ + +++I +
Sbjct: 1496 VVSRLWQRRKNVQAVELLIADELHMLGG-QGGYVYEVVVSRMHYIALQTESNLRIVGLGV 1554
Query: 108 TIGNINALSTFIEGITY-VENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTG 166
+ N L ++ + + N P H+ V ++ + +S T + +L ++
Sbjct: 1555 PLSNARDLGEWLGAKKHTIYNFSP--HARPVPLELHL------QSFTIPHFPSLMLAMAR 1606
Query: 167 SGPDAVLHLVQGNLMVLIFCSSKIACSNLALRL--------QFDRFPGTKEYKKQEKEDL 218
++L L L+F ++ + AL L DRF T+ ++ L
Sbjct: 1607 PAYSSILQLSPSK-PALVFVPTRKQTRSTALDLVAACIADDAEDRFLHTE---IEQIAPL 1662
Query: 219 IEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAG 278
+E + E L E + +G+ Y+H L+ ++R++ + G +Q++ + +
Sbjct: 1663 LERIDERA-------LAESLSHGIGYYHEALSKSDKRIVSHLFNIGAIQVMLASRDVCWE 1715
Query: 279 VNLPAQRVIIRDS--YVGRD--FISLNMYK--QMVGRAGRTGLQESGESIMLCKTM-QDF 331
+ A VII ++ + GR+ +I + + QM GRA R SG+ +++ + +D+
Sbjct: 1716 IEFTAHLVIIMNTQFFDGREHRYIDYPVSEILQMFGRASRPLDDRSGKGVLMVPAVRRDY 1775
Query: 332 LRFSSMMNAGPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQ 384
+ +N P+ SH+ L D + ++ +S +D + +T FY+
Sbjct: 1776 --YKKFLNEA-LPMESHLQ-IYLHDAFVTEISTKTITSTQDAVDWMTYTYFYR 1824
>gi|451854988|gb|EMD68280.1| hypothetical protein COCSADRAFT_196252 [Cochliobolus sativus ND90Pr]
Length = 1935
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 101/377 (26%), Positives = 172/377 (45%), Gaps = 62/377 (16%)
Query: 35 RQLNKKSIYICTIEKGSKLIGSLIQENRIDE-IGLIVIDEFHMLNEPQRGPILECVVSKV 93
R + +I I T EK + ++ I + +IDE H+L E RG LE VVS++
Sbjct: 710 RHVQSANILITTPEKWDSMTRKWRDHEKLMRLIRVFLIDEVHILKE-DRGATLEAVVSRM 768
Query: 94 LYLKKSIQIFAMSATIGNINALSTFI-----------EGITYVENSRPTKHSEYVTVDKR 142
+ +++ A+SAT+ N N ++T++ ++ E RP K ++V
Sbjct: 769 KSIGTNVRFVALSATVPNFNDIATWLGKSPTDPNTAAANESFGEEFRPVKLRKHVC---- 824
Query: 143 VFQSFDGKSLTEI-YADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSS--------KIACS 193
+ + E + LD + D + +G +++FC++ K+ S
Sbjct: 825 ---GYMSNTNNEFGFEKVLDSKVN----DVIATYSEGK-PIMVFCATRNSTLNTAKLIAS 876
Query: 194 NLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGE 253
+ R+ DRF +K K I L +E L E + GVA+HHA L +
Sbjct: 877 WWSSRMDNDRF-----WKAPSKP--IRLLNKE--------LRETVASGVAFHHAGLDIED 921
Query: 254 RRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVG-----RDFISLNMYKQMVG 308
R IE +++ G + +ICCTSTLA GVNLP VI++++ +++ L M QM+G
Sbjct: 922 RMQIERSFITGEISVICCTSTLAVGVNLPCHLVIVKNTMAWGPAGHQEYSDLEMM-QMLG 980
Query: 309 RAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISS--HMDPPTLVDLILEVVAANL 366
RAGR ++ ++++ T Q +R M G E I S H++ L+D + +
Sbjct: 981 RAGRPQFDDTAVAVIM--TRQTKVRRYEQMVTGQEIIESKLHLN---LIDHMNAEIGLGT 1035
Query: 367 CSSLEDVKTLIKHTLFY 383
L + +K T +
Sbjct: 1036 IYDLSSARKWLKGTFLF 1052
>gi|321259710|ref|XP_003194575.1| pre-mRNA splicing factor [Cryptococcus gattii WM276]
gi|317461047|gb|ADV22788.1| Pre-mRNA splicing factor, putative [Cryptococcus gattii WM276]
Length = 2153
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 106/394 (26%), Positives = 191/394 (48%), Gaps = 54/394 (13%)
Query: 24 AGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRG 83
A + G TK+Q+++ I + T EK + + + + LI++DE H+L++ RG
Sbjct: 573 AELTGDSQLTKQQISETQIIVTTPEKWDVITRKSTDTSYTNLVRLIIVDEIHLLHD-DRG 631
Query: 84 PILECVVSKVL----YLKKSIQIFAMSATIGNINALSTFI-----EGITYVENS-RPTK- 132
P+LE ++++ + +++ +SAT+ N ++TF+ +G+ Y + S RP
Sbjct: 632 PVLESILARTIRKMDQTHDDVRVVGLSATLPNYKDVATFLRVDPKQGLFYFDASFRPVGL 691
Query: 133 HSEYVTV-DKRVFQSFDGKSLTEI-YADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKI 190
+++ V +K+ + +++ E+ Y L+Y+ G L+F S+
Sbjct: 692 KQQFIGVTEKKAIKRL--QTINEVCYEKVLNYA--------------GRSQTLVFVHSRK 735
Query: 191 ACSNLALRLQFDRFPGTKEYKKQ-------EKEDLIEALKEENDGKLSTNLEECILYGVA 243
+ A L+ KE Q +E LI+ + D KL ++ + +G
Sbjct: 736 ETAKTAAFLRDTAM--EKETLTQFINPEGASREILIQEAAQCKDAKL----KDLLPFGFG 789
Query: 244 YHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYV-----GR-DF 297
HHA ++ +R +E+ + G +Q++CCT+TLA GVNLPA VII+ + V G+
Sbjct: 790 IHHAGMSREDRTTVEQLFFEGHIQVLCCTATLAWGVNLPAHTVIIKGTQVYNPEKGKWSE 849
Query: 298 ISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDL 357
+S QM+GRAGR GE I++ + ++S+MN PI S + +L
Sbjct: 850 LSPQDVLQMLGRAGRPQFDTYGEGIIIT-NHGELQYYTSLMNQQ-LPIESQFVSRMVDNL 907
Query: 358 ILEVVAANLCSSLEDVKTLIKHTLFY--QLKSPE 389
E+V N+ + E V+ L +T Y L+SP+
Sbjct: 908 NAEIVLGNVRNRDEGVQWL-GYTYLYVRMLESPK 940
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 93/405 (22%), Positives = 168/405 (41%), Gaps = 60/405 (14%)
Query: 37 LNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYL 96
L K + +CT + L + IGL++ DE ++ G E +VS+ Y+
Sbjct: 1424 LRKADVVVCTPSQWDLLSRRWKTRKDVQNIGLLIADELQLIGG-DVGSTYEVIVSRTRYV 1482
Query: 97 KK----SIQIFAMSATIGNINALSTFIEGITY-VENSRPTKHSEYVTVDKRVFQSFDGKS 151
+ + +I A S ++ N L +I + V N P + V QSF+
Sbjct: 1483 SQQTGITTRIVACSVSLSNARDLGDWIGANSQTVFNFSPAARPLPLEVH---LQSFNVPH 1539
Query: 152 LTEIYADNLDYSLTGSGPDAVLHLVQ--GNLMVLIFCSSKIACSNLALRLQFDRFPGTKE 209
+ L + P A L +V+ + F S+ C A + E
Sbjct: 1540 FPSLM-------LAMAKP-AYLSMVEHSAGRPTICFVPSRKQCKLTANDILTYCLADDDE 1591
Query: 210 YK--KQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQ 267
+ E+EDL L+ ND +L+E + YG+ Y+H L+ +++++ + G ++
Sbjct: 1592 TRFLNVEREDLEPHLERLND----EDLKETLRYGIGYYHEALSKLDKKIVTTLFEEGAIK 1647
Query: 268 IICCTSTLAAGVNLPAQRVIIRDSYVGRDFISLNMYK----------QMVGRAGRTGLQE 317
++ + A + A VII +G + ++ QM+GRA R +
Sbjct: 1648 VLVASKDTAWSLPATAYMVII----MGVQYFDGQEHRYVDYAIADVLQMMGRACRPMIDT 1703
Query: 318 SGESIMLC-KTMQDFLRFSSMMNAGPEPISSHMDPPTLVD-LILEVV---------AANL 366
S +++C +T +DF F +N P+ S + P L D E+V A +
Sbjct: 1704 SSRCVLMCQQTRKDF--FKKFLNEA-LPVESSL-PSFLHDHFNAEIVARTIENKQDAVDW 1759
Query: 367 CSSLEDVKTLIKHTLFYQLK--SP----EDQQTFLETTLSEIVAS 405
C+ + L+++ FY L+ +P E +ETTL+++V S
Sbjct: 1760 CTWTWFYRRLMQNPGFYNLQGTTPTHIGEYLSELVETTLNDLVNS 1804
>gi|22091415|gb|AAL69489.2| putative RNA helicase [Arabidopsis thaliana]
Length = 805
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 110/404 (27%), Positives = 181/404 (44%), Gaps = 36/404 (8%)
Query: 21 EEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEP 80
+E + G Y P L I I T EK + + + + ++GL+++DE H+L
Sbjct: 79 KEMVEMTGDYTPDLVALLSADIIISTPEKWDGISRNWHTRSYVKKVGLVILDEIHLLGA- 137
Query: 81 QRGPILECVVSKVLYL----KKSIQIFAMSATIGNINALSTFIE-GITYVENSRPTKHSE 135
RGPILE +VS++ Y+ ++S++ +S + N L+ ++ G + N +P+
Sbjct: 138 DRGPILEVIVSRMRYISSQTERSVRFVGLSTALANAGDLADWLGVGEIGLFNFKPSVRPV 197
Query: 136 YVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNL 195
+ V Q + GK Y ++ + H VLIF SS+
Sbjct: 198 PIEVH---IQGYPGK----YYCPRMNSMNKPAYAAICTH--SPTKPVLIFVSSRRQTRLT 248
Query: 196 ALRLQFDRFPGTKEYKKQ----EKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTA 251
AL L +F + E+ +Q +EDL L + D NL + +G+ HHA L
Sbjct: 249 ALDLI--QFAASDEHPRQFLSVSEEDLQMVLSQITD----QNLRHTLQFGIGLHHAGLND 302
Query: 252 GERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS--YVGR-----DFISLNMYK 304
+R +EE + +Q++ TSTLA GVNLPA VII+ + + G+ DF L
Sbjct: 303 HDRSAVEELFTNNKIQVLVSTSTLAWGVNLPAHLVIIKGTEYFDGKTKRYVDF-PLTEIL 361
Query: 305 QMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAA 364
QM+GRAGR + G++++L + F P P+ S + E+V+
Sbjct: 362 QMMGRAGRPQFDQHGKAVILVHEPKK--SFYKKFLYEPFPVESSLKEKLHDHFNAEIVSG 419
Query: 365 NLCSSLEDVKTLIKHTLFYQLKSPEDQQTFLETTLSEIVASLLA 408
+ + + V L LF +L + LE T E + S L+
Sbjct: 420 TIGNKEDAVHYLTWTYLFRRLMA-NPAYYGLEGTQDETICSYLS 462
>gi|238487318|ref|XP_002374897.1| DEAD/DEAH box DNA helicase (Mer3), putative [Aspergillus flavus
NRRL3357]
gi|220699776|gb|EED56115.1| DEAD/DEAH box DNA helicase (Mer3), putative [Aspergillus flavus
NRRL3357]
Length = 795
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 103/364 (28%), Positives = 167/364 (45%), Gaps = 35/364 (9%)
Query: 35 RQLNKKSIYICTIEKGSKLIGSLIQENRIDE-IGLIVIDEFHMLNEPQRGPILECVVSKV 93
R + I I T EK + R+ + + L +IDE H+L E RG LE VVS++
Sbjct: 120 RSVQNSQIIITTPEKWDSVTRKWKDHARLMQLVKLFLIDEVHILKE-SRGATLEAVVSRM 178
Query: 94 LYLKKSIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRV--FQSFDGKS 151
+ +++ A+SATI N ++T++ G P H E+ + R Q F
Sbjct: 179 KTIGSNVRFVALSATIPNSEDIATWL-GKDATNQHVPA-HREHFGEEFRPVRLQRFVYGY 236
Query: 152 LTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFC---SSKIACSNLALRLQFDRFPGTK 208
++ D + PD +L + ++IFC +S +A + RL P +
Sbjct: 237 QSQGNDFAFDKMCSSKLPD-ILAMHSCRKPIMIFCCTRNSSVATAKELARLWSMSNPPAR 295
Query: 209 EYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQI 268
+K K S L VA+HHA L G+R+ IE +L G + I
Sbjct: 296 LWKGPSK---------------SFEFNNIDLKSVAFHHAGLNPGDRQTIENGFLQGQINI 340
Query: 269 ICCTSTLAAGVNLPAQRVIIRDSYVG------RDFISLNMYKQMVGRAGRTGLQESGESI 322
ICCTSTLA GVNLP VII+++ VG +++ L + QM+GRAGR + ++
Sbjct: 341 ICCTSTLAVGVNLPCHLVIIKNT-VGWLDGGCKEYSDLEIM-QMLGRAGRPQFDKDAVAV 398
Query: 323 MLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLF 382
+L T ++ + + + +G E + S + + L E+ N+ S ++ L LF
Sbjct: 399 IL--TRKERVDYYERLVSGSESLESCLHLNLIDHLNAEIGLGNVTSVESAIRWLAGTFLF 456
Query: 383 YQLK 386
+L+
Sbjct: 457 VRLR 460
>gi|448514817|ref|XP_003867175.1| hypothetical protein CORT_0B00140 [Candida orthopsilosis Co 90-125]
gi|380351514|emb|CCG21737.1| hypothetical protein CORT_0B00140 [Candida orthopsilosis]
Length = 1857
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 115/437 (26%), Positives = 209/437 (47%), Gaps = 43/437 (9%)
Query: 28 GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILE 87
G +++Q+++ ++ + T EK I + + + I L++IDE H+L++ RGP+LE
Sbjct: 384 GDSSLSQQQISETNVIVTTPEKWD--IITRKDHDYLKLIKLLIIDEIHLLHD-LRGPVLE 440
Query: 88 CVVSKVLYLKKSIQIFAMSATIGNINALSTFI----EGITYVENS-RPTKHSEYVTVDKR 142
+VS+V+ + I+I +SAT+ N ++ FI +G+ Y ++S RP
Sbjct: 441 GIVSRVVRTGEDIRIVGLSATLPNYLDVAKFIRASDKGVFYFDSSYRPCP---------- 490
Query: 143 VFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRLQFD 202
+ Q F G + E A ++ + + ++++ N ++IF S+ + A L
Sbjct: 491 LEQKFVG--IKEQKALKKKIAMNEACLEQTSNVLKRNQQLIIFVHSRNETAATAEYLVEG 548
Query: 203 RFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYL 262
E + E L++E+D + L+ ++ G+ HHA L +R L+E+ +
Sbjct: 549 LANSDTEIITEISTR--EILQQESDRVTNVKLQRLLISGIGVHHAGLNRDDRTLVEDLFA 606
Query: 263 AGTLQIICCTSTLAAGVNLPAQRVIIRDSYV----GRDFISLNMYK--QMVGRAGRTGLQ 316
G L+ + T+TLA GVNLPA VII+ + V ++ L+ QM+GRAGR
Sbjct: 607 QGHLKALVSTATLAWGVNLPAHTVIIKGTEVYSPDAGNWTQLSPQDVFQMLGRAGRPRYD 666
Query: 317 ESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKTL 376
+GE I++ T QD +++ + PI S + + ++ EVV+ + SSL D
Sbjct: 667 RNGEGIII--TSQDRIQYYLAILNQQYPIESQLMTKLIDNVNAEVVSGTI-SSLNDGIDW 723
Query: 377 IKHTLFY--QLKSP----------EDQQTFLETTLSEIVASLLASKGTMLTMNEAGHLSL 424
+ +T Y ++SP E+ TF L I A+ L +++ G +
Sbjct: 724 LGYTYLYVRMVQSPKLYGADSLTNEENPTFYVRRLELINAAFSVLHEKKLLVHDGGKVVS 783
Query: 425 TSIAKAAVQAGLSHDVC 441
T + K A +S++
Sbjct: 784 TELGKIASYHYISYETV 800
>gi|67522042|ref|XP_659082.1| hypothetical protein AN1478.2 [Aspergillus nidulans FGSC A4]
gi|40745452|gb|EAA64608.1| hypothetical protein AN1478.2 [Aspergillus nidulans FGSC A4]
Length = 3340
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 120/474 (25%), Positives = 219/474 (46%), Gaps = 52/474 (10%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V E+ ++ + + + E G + TK+Q+ + + + T EK + +
Sbjct: 600 LVQEQVENFGRRLAPYGIKVAELTGDRQL---TKQQIAETQVIVTTPEKFDVITRKASET 656
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVL----YLKKSIQIFAMSATIGNINALS 116
+ + LI+IDE H+L++ +RGP++E +VS+ + +++I +SAT+ N ++
Sbjct: 657 SYTKLVRLIIIDEIHLLHD-ERGPVIESIVSRTIRQVEQTGDAVRIVGLSATLPNYRDVA 715
Query: 117 TFI-----EGITYVENS-RPTK-HSEYVTV-DKRVFQSFDGKSLTEIYADNLDYSLTGSG 168
+F+ +G+ + + S RP E++ V DK+ + K + +I + +
Sbjct: 716 SFLRVDPAKGLFHFDGSYRPCPLKQEFIGVTDKKPIKQL--KIMNDICYNKV-------- 765
Query: 169 PDAVLHLVQGNLMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEA--LKEEN 226
+ H+ Q +LIF S+ + A L+ D+ + + K D L EE
Sbjct: 766 ---IEHVGQNRNQMLIFVHSRKETAKTAKYLR-DKALEMETIGQILKSDSASRAILAEEA 821
Query: 227 DGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRV 286
+ L++ + YG HHA L+ +R ++ + G++Q++ CT+TLA GVNLPA V
Sbjct: 822 ESVNDAALKDILPYGFGIHHAGLSLADRDSVQALFKDGSIQVLVCTATLAWGVNLPAHTV 881
Query: 287 IIRDSYV----GRDFISLNMYK--QMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNA 340
II+ + V ++ L+ QM+GRAGR GE I++ T + + S+MN
Sbjct: 882 IIKGTQVYSPEKGSWVELSPQDVLQMLGRAGRPQYDTYGEGIIIT-TQAEIQYYLSLMNQ 940
Query: 341 GPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQ-LKSPE--------DQ 391
PI S + ++ E+V N+ + E V L LF + L+SP +
Sbjct: 941 Q-LPIESQLVSKLADNMNAEIVLGNIRTRDEGVDWLGYTYLFVRMLRSPGLYSVGADYEN 999
Query: 392 QTFLETTLSEIV---ASLLASKGTMLTMNEAGHLSLTSIAKAAVQAGLSHDVCL 442
LE ++V A LL G + + G L T + + A + H+ L
Sbjct: 1000 DDALEQKRVDLVHSAAVLLEKAGLVKYDKKTGRLQSTELGRIASHYYIGHNSML 1053
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 88/400 (22%), Positives = 174/400 (43%), Gaps = 57/400 (14%)
Query: 66 IGLIVIDEFHMLNEPQRGPILECVVSKV----LYLKKSIQIFAMSATIGNINALSTFIEG 121
+ L V DE HML G + E VVS++ L + ++I +S + N + +I
Sbjct: 1505 VELFVADELHMLGG-YGGYVYEVVVSRMHSIALQTESGMRIVGLSVPLSNARDIGEWIGA 1563
Query: 122 ITY-VENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQ--G 178
+ + N P H+ V ++ + QSF + L + P A L ++Q
Sbjct: 1564 SKHTIYNFSP--HARPVPLELHI-QSFSIPHFPSLM-------LAMARP-AYLSILQLSA 1612
Query: 179 NLMVLIFCSSKIACSNLALRL--------QFDRFPGTKEYKKQEKEDLIEALKEENDGKL 230
+ LIF ++ A+ L DRF +E + L+ + E
Sbjct: 1613 DKPALIFVPNRKQTRATAIDLLTACSIDDDEDRF---LHADIEELQPLLGRVHERT---- 1665
Query: 231 STNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRD 290
L E + +G+ Y+H L+ ++R++ Y G +Q++ + + +NL V++
Sbjct: 1666 ---LAESLSHGIGYYHEALSQTDKRIVSHLYNIGAIQVVIASRDVCWELNLTGHLVVVMG 1722
Query: 291 S--YVGRD--FISLNMYK--QMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEP 344
+ + GR+ +I + + QM G+A R G + G +++ T++ + +N P
Sbjct: 1723 TQFFEGREHRYIDYPISEILQMFGKASRPGQDKVGRGVLMVPTVKREY-YKKFLNEA-LP 1780
Query: 345 ISSHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQ--LKSP------EDQQTFLE 396
+ SH+ + D + ++ +S +D + +T FY+ L +P + L
Sbjct: 1781 VESHLQ-LYMHDAFVTEISQGTIASTQDSVDWLTYTYFYRRLLANPSFYGLTDISHEGLS 1839
Query: 397 TTLSEIVASLLA--SKGTMLTMNEAGHLSLTSIAKAAVQA 434
T LSE+V + L S+ ++ ++E S++ + A++ A
Sbjct: 1840 TFLSELVENTLKELSEAKIIDLDEEDD-SVSPLNAASIGA 1878
>gi|354683885|gb|AER35071.1| putative RNA helicase [Dictyostelium lacteum]
Length = 2214
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 122/475 (25%), Positives = 207/475 (43%), Gaps = 61/475 (12%)
Query: 28 GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILE 87
G + +Q+++ I + T EK + + LI+IDE H+L++ +RGPILE
Sbjct: 630 GDQSLSNKQISETQIIVTTPEKWDIITRKSGDRAYTQLVKLIIIDEIHLLHD-ERGPILE 688
Query: 88 CVVSKVLYLKKS----IQIFAMSATIGNINALSTFIE----GITYVENS-RPTK-HSEYV 137
C+V++ L + +S I++ +SAT+ N + F+ G+ Y + S RP +Y+
Sbjct: 689 CIVARTLRMIESTQEMIRLVGLSATLPNYEDVGIFLRVKEGGVFYFDQSYRPIPLQQQYI 748
Query: 138 TVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLAL 197
+ R + + L EI + + + G +L+F S+ +
Sbjct: 749 GISDRGVKQL--QLLNEITYNKVSERV-------------GEHQILVFVHSRRETAKTGK 793
Query: 198 RLQFDRFPGTKEYKKQEKEDLIEALKEENDGKL-STNLEECILYGVAYHHADLTAGERRL 256
++ K +K E L+ E + S +L++ + YG+ HHA +T +R L
Sbjct: 794 DIRDRAIEADIIGKFVKKLSTKEVLRSEAEKHAKSQDLKDLLPYGIGIHHAGMTRTDRTL 853
Query: 257 IEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYV-----GRDFISLNMYKQMVGRAG 311
+EE + +Q++ TSTLA GVNLPA VII+ + V G +S QM+GRAG
Sbjct: 854 VEELFGDKHIQVLISTSTLAWGVNLPAHTVIIKGTQVYQPDKGWTELSPLDVTQMLGRAG 913
Query: 312 RTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAANLCSSLE 371
R GE I++ T Q L+F + I S +L E+V + +L
Sbjct: 914 RPSFDNEGEGIVI--TSQKELQFYLSLTNTQLSIESQFISRLPDNLNAEIVLGTI-QTLT 970
Query: 372 DVKTLIKHTLFY--QLKSPEDQQTFLETTLSEI----------------VASLLASKGTM 413
D + +T Y L++P T E + EI A +L G +
Sbjct: 971 DAVHWLGYTYLYICMLRNP----TLYEISFDEIQNDPRLEQRRIDLVHSAAIILEKNGLI 1026
Query: 414 LTMNEAGHLSLTSIAKAAVQAGLSHDVCLIIYSDLLH---NKLNFCLLNSLHMLF 465
++G T + K A ++ + IY++ L N++ F L S+ F
Sbjct: 1027 KYDRKSGKFQTTDLGKVASHYYITSQ-SMSIYNEHLRPTMNEIEFFRLFSMSSEF 1080
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 161/337 (47%), Gaps = 46/337 (13%)
Query: 37 LNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYL 96
L + ++ + T EK L Q I I L+++DE H++ GP+LE VVS++ Y+
Sbjct: 1479 LERSNLIVTTCEKWDILSRRWKQRKAIQSIRLLIVDEMHLIG-GTYGPVLEVVVSRMRYI 1537
Query: 97 KKS----IQIFAMSATIGNINALSTFIEGIT------YVENSRPTKHSEYVTVDKRVFQS 146
K I+I A+S++I N + +I G T + N RP + V + +
Sbjct: 1538 TKQTQSPIRIVALSSSIANARDIVMWI-GATANTCYNFHPNVRPIQLE--VAIQGFDYPH 1594
Query: 147 FDGKSLTEIYADNLDYSLTGSGPDAVLHLVQG-NLMVLIFCSSKIACSNLALRLQFDRFP 205
F+ + L ++T A+ + + N +IF +K +LA L F
Sbjct: 1595 FNARML----------AMTKP---AIYEVSRNKNAQSIIFVPNKKLSRSLARDLI--AFV 1639
Query: 206 GTKEYKKQEKEDLI---EALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYL 262
++E K L+ E L++E S L + + +G+A++H LT ERR +E +
Sbjct: 1640 DSEE-DLNRKPYLVCSEEILQKELQKIESVALRQSLEWGIAFYHEGLTEVERRTVENLFR 1698
Query: 263 AGTLQIICCTSTLAAGVNLPAQRVIIRDS--YVGRDF----ISLNMYKQMVGRAG--RTG 314
+G ++++ T ++ +++ AQ V+I + Y G+ +N QM+GRAG +
Sbjct: 1699 SGAIRVLIATHSVCWSLDVYAQLVVIMGTQVYQGKQIRYVDYPINDVLQMIGRAGNQQNH 1758
Query: 315 LQESGESIMLC-KTMQDFLRFSSMMNAGPEPISSHMD 350
+++ + ++LC + +D+ + M P P+ SH+D
Sbjct: 1759 NEKTAKCLLLCHQPKKDYYK---MFLNEPLPVESHLD 1792
>gi|390367011|ref|XP_795274.2| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
[Strongylocentrotus purpuratus]
Length = 2030
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 106/391 (27%), Positives = 190/391 (48%), Gaps = 42/391 (10%)
Query: 16 FKFYLEEY----AGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVI 71
F+ L+ Y + + G + TK Q+ I +CT EK + ++ + LI+I
Sbjct: 556 FRKRLDSYGITVSELTGDHQLTKDQITATQIIVCTPEKWDIITRKGGEKTYTQLVRLIII 615
Query: 72 DEFHMLNEPQRGPILECVVSKVLY----LKKSIQIFAMSATIGNINALSTFI-----EGI 122
DE H+L++ RGP+LE V+S+ + ++ +++ +SAT+ N ++ F+ +G+
Sbjct: 616 DEIHLLHD-DRGPVLEAVISRTIRNIETSQEDVRLVGLSATLPNYQDVAGFMRVKPDKGL 674
Query: 123 TYVENS-RPTK-HSEYVTV-DKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGN 179
+ +NS RP +Y+ + +K+ + F + + EI + + + +G + VL V
Sbjct: 675 FFFDNSFRPVPLEQQYIGITEKKALKRF--QLMNEIVYEKV---MDNAGKNQVLVFVHSR 729
Query: 180 LMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECIL 239
+ K A + L L+ D T +E E L+ E + + L++ +
Sbjct: 730 KE-----TGKTARAIRDLCLEQD----TLGQFLREGSASTEILRSEAEHAENLELKDLLP 780
Query: 240 YGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYV-----G 294
YG A HHA +T +R L+E+ + +Q++ T+TLA GVNLPA VII+ + + G
Sbjct: 781 YGFAMHHAGMTRLDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKG 840
Query: 295 RDFISLNMYK--QMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPP 352
R ++ L QM+GRAGR GE I++ T L++ + P+ S
Sbjct: 841 R-WVELGPLDVLQMLGRAGRPQYDTKGEGILI--TSHSELQYYLSLQNQQLPVESQFISK 897
Query: 353 TLVDLILEVVAANLCSSLEDVKTLIKHTLFY 383
+L EVV N+ +++D T + +T Y
Sbjct: 898 LADNLNAEVVLGNI-QTMKDAVTWLGYTYLY 927
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 76/342 (22%), Positives = 155/342 (45%), Gaps = 57/342 (16%)
Query: 37 LNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYL 96
L K ++ I T ++ L Q + + L +IDE H++ GP+LE + S++ Y+
Sbjct: 1232 LAKGNVIISTPDRWDVLSRRWKQRKNVQNVNLFIIDELHLIG-GDNGPVLEVICSRMRYI 1290
Query: 97 ----KKSIQIFAMSATIGNINALSTFIEG-----ITYVENSRPTKHSEYVTVDKRVFQSF 147
+++I++ A+S+++ N ++ ++ + N RP
Sbjct: 1291 SSQIERNIRLVALSSSLANAKDIAQWLGASPTNTFNFHPNVRPVP--------------- 1335
Query: 148 DGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLM-------VLIFCSSKIACSNLALRL- 199
E++ + + TGS A++ ++ V++F S+ A+ L
Sbjct: 1336 -----LELHIQGFNITHTGSRLIAMVKPTYNAIIKHSPTKPVIVFVPSRKQTKLTAIDLL 1390
Query: 200 --QFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLI 257
+ +K+DL L + +D L E + G+AY H L+ E++++
Sbjct: 1391 TYVTAEDGAESRFLHVDKDDLAAHLSKVDD----ETLREMLSNGIAYLHEGLSEIEQKVV 1446
Query: 258 EEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS--YVGR-----DFISLNMYKQMVGRA 310
E+ Y++G +Q++ + + G+ L A V++ D+ Y G+ D+ ++ QM GRA
Sbjct: 1447 EQLYMSGAVQVVVASRMMCWGMTLNAHLVVVMDTQYYNGKIHAYVDYPITDVL-QMTGRA 1505
Query: 311 GRTGLQ-ESGESIMLCK-TMQDFLRFSSMMNAGPEPISSHMD 350
R ++ E + ++LC+ + +DF + M P P+ SH+D
Sbjct: 1506 NRPEIEHEVSKCVVLCQGSKKDF--YKKFMYE-PLPVESHLD 1544
>gi|398407067|ref|XP_003854999.1| hypothetical protein MYCGRDRAFT_68519 [Zymoseptoria tritici IPO323]
gi|339474883|gb|EGP89975.1| hypothetical protein MYCGRDRAFT_68519 [Zymoseptoria tritici IPO323]
Length = 1982
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 101/374 (27%), Positives = 178/374 (47%), Gaps = 36/374 (9%)
Query: 33 TKRQLNKKSIYICTIEKGSKLIGSLIQENR-IDEIGLIVIDEFHMLNEPQRGPILECVVS 91
TK ++ + I + T EK + + + ++ L++IDE HML++ +RG +LE +V+
Sbjct: 382 TKAEIVQTQIIVTTPEKWDVVTRKSTGDTELVQKVRLLIIDEVHMLHD-ERGAVLESLVA 440
Query: 92 K----VLYLKKSIQIFAMSATIGNINALSTFIE-----GITYVENS-RPTKHSEYVTVDK 141
+ V + I+I +SAT+ N ++ F++ G+ Y + S RP ++
Sbjct: 441 RTERQVESTQSLIRIVGLSATLPNYVDVADFLKVNRMAGLFYFDQSFRPVPLEQH----- 495
Query: 142 RVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRLQF 201
F GK T+ +N+D + + V +++ V++F S+ N A R+ +
Sbjct: 496 --FLGVKGKPGTKASRENID----NTAFEKVKDMLELGHQVMVFVHSRKDTVNTA-RMLY 548
Query: 202 DRF--PGTKE-YKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIE 258
+ G + + E +ALK+ K + E + G+ HHA + +R +IE
Sbjct: 549 EHAMDEGLSDLFDVTNHEGYTQALKDVKQSK-GREIRELVQKGMGTHHAGMPRSDRNMIE 607
Query: 259 EAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYV----GRDFISLNMYK--QMVGRAGR 312
+ G L+++CCT+TLA GVNLPA VII+ + + F+ L + Q+ GRAGR
Sbjct: 608 RLFAEGVLKVLCCTATLAWGVNLPAAAVIIKGTQLYSAEAGKFVDLGILDVLQIFGRAGR 667
Query: 313 TGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAANLCSSLED 372
Q++G I + T QD L+ +PI S + +L E+ + S E
Sbjct: 668 PQFQDTG--IGMIITTQDKLQHFLTAVTQQQPIESQFSKKMVDNLNAEISLGTVTSVPEA 725
Query: 373 VKTLIKHTLFYQLK 386
+ L LF ++K
Sbjct: 726 ITWLGYSYLFVRMK 739
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 93/344 (27%), Positives = 150/344 (43%), Gaps = 53/344 (15%)
Query: 1 MVHEKYQSLAKA-AEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQ 59
+V E+ Q +K + L E + G P R + I + T EK + S
Sbjct: 1196 LVRERVQDWSKRLTRQMGLKLVE---LTGDNTPDTRTIRDADIIVTTPEKWDGISRSWQT 1252
Query: 60 ENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYL----KKSIQIFAMSATIGNINAL 115
+ + ++ L++IDE H+L RGPILE +VS++ Y+ K S+++ MS N L
Sbjct: 1253 RSYVQQVSLVIIDEIHLLGG-DRGPILEIIVSRMNYIASQKKGSVRLVGMSTACANAMDL 1311
Query: 116 STFI---EGITYVENS-RPTKHSEYVT--VDKRVF----QSFDGKSLTEIYADNLDYSLT 165
++ EG+ +S RP ++ +R F QS + + I + + D
Sbjct: 1312 GNWLGVKEGLFNFRHSVRPVPLEIFIDGFPHQRGFCPLMQSMNRPTFLAIKSHSPDKP-- 1369
Query: 166 GSGPDAVLHLVQGNLMVLIFCSSK----IACSNLALRLQFDRFPGTKEYKKQEKEDLIEA 221
V++F +S+ + +L + P + + K +EDL
Sbjct: 1370 ----------------VIVFVASRRQTRLTARDLINLCGMEDNP--RRFMKMSEEDLNLN 1411
Query: 222 LKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNL 281
L D L +E + +G+ HHA L +R L EE + +QI+ TSTLA GVNL
Sbjct: 1412 LARVKDDAL----KEAMSFGIGLHHAGLVESDRSLAEELFANNKIQILVATSTLAWGVNL 1467
Query: 282 PAQRVIIRDSYV------GRDFISLNMYKQMVGRAGRTGLQESG 319
PA V+++ + G + L QM+GRAGR SG
Sbjct: 1468 PAHLVVVKGTQFFDAKIEGYKDMDLTDVLQMLGRAGRPQFDTSG 1511
>gi|159480802|ref|XP_001698471.1| hypothetical protein CHLREDRAFT_142899 [Chlamydomonas reinhardtii]
gi|158282211|gb|EDP07964.1| predicted protein [Chlamydomonas reinhardtii]
Length = 933
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 105/363 (28%), Positives = 158/363 (43%), Gaps = 56/363 (15%)
Query: 26 VKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENR----IDEIGLIVIDEFHMLNEPQ 81
+ G P L + T EK L L +++R + +I L++IDE H+LNE +
Sbjct: 61 LSGDAEPEASALEAADLLCTTPEKLDALSRKLSEQHRSAAFLSDISLVLIDEVHLLNEAE 120
Query: 82 RGPILEC-VVSKVLYLK----------KSIQIFAMSATIGNINALSTFIE----GI-TYV 125
RG LE VVS+ L ++ A+SATI N+ ++T++ G+ Y
Sbjct: 121 RGSALEAGVVSRFAMLATFPQLQQHAVSRLRFVAVSATIPNVRDIATWLRVPPAGLKVYG 180
Query: 126 ENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIF 185
E RP K V F ++ LD L G V +G L+F
Sbjct: 181 EEMRPVKLRTVVLAYAPSKNDF-------LFERRLDTYLAG----VVAEHSRGK-PTLVF 228
Query: 186 CSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYH 245
CSS+ A+ L PG + ++ + L+ C++ GV +H
Sbjct: 229 CSSRKGTIESAMHLAKGAGPGGRAAYVRDAAHAARLAAAARQVAANKQLQTCLVAGVGFH 288
Query: 246 HADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS------------YV 293
+A + +R L+E +LAG L ++C TSTLA GVNLPA VIIR +
Sbjct: 289 NAAMEGDQRELVEGLFLAGDLPVLCSTSTLALGVNLPAHLVIIRGTRRYCGADGGGGGQG 348
Query: 294 GRDFISLNMYK--------QMVGRAGRTGLQESGES-IMLCKTMQDFLRFSSMMNAGPEP 344
S+ YK QMVGRAGR G + IM K +D R++++++ G E
Sbjct: 349 DEAAGSIGGYKEYDRSVCLQMVGRAGRPQFDTEGVAVIMTQKETRD--RYTNLLS-GSEA 405
Query: 345 ISS 347
+ S
Sbjct: 406 VES 408
>gi|115491105|ref|XP_001210180.1| hypothetical protein ATEG_00094 [Aspergillus terreus NIH2624]
gi|114197040|gb|EAU38740.1| hypothetical protein ATEG_00094 [Aspergillus terreus NIH2624]
Length = 2904
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 124/505 (24%), Positives = 232/505 (45%), Gaps = 56/505 (11%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V E+ +L K E + + E G + TK+Q+ + + + T EK + +
Sbjct: 597 LVQEQVGNLGKRLEPYGIRVSELTGDRQL---TKQQIAETQVIVTTPEKYDVITRKASET 653
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVL----YLKKSIQIFAMSATIGNINALS 116
+ + L++IDE H+L++ +RGP++E +VS+ + + ++I +SAT+ N +
Sbjct: 654 SYTRLVHLLIIDEIHLLHD-ERGPVIESIVSRTIRKGEQTGEPVRIVGLSATLPNYRDVG 712
Query: 117 TF-----IEGITYVENS-RPTK-HSEYVTV-DKRVFQSFDGKSLTEIYADNLDYSLTGSG 168
F ++G+ + + S RP E++ V DK+ + K++ +I + +
Sbjct: 713 NFLRVDPVKGLFHFDGSFRPCPLKQEFIGVTDKKAIKQL--KTMNDICYNKV-------- 762
Query: 169 PDAVLHLVQGNLMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEA--LKEEN 226
+ + Q +LIF S+ + A ++ D+ + + + D L EE
Sbjct: 763 ---MEQVGQRRNQMLIFVHSRKETAKTAKYIR-DKALEMETIGQILRSDAASRAILSEEA 818
Query: 227 DGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRV 286
+ +L++ + YG HHA L+ +R ++ + G+LQ++ CT+TLA GVNLPA V
Sbjct: 819 ESVDDPSLKDLLPYGFGIHHAGLSLADRDSVQALFADGSLQVLVCTATLAWGVNLPAHTV 878
Query: 287 IIRDSYV----GRDFISLNMYK--QMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNA 340
II+ + + ++ L+ QM+GRAGR GE I++ + + + S+MN
Sbjct: 879 IIKGTQIYSPEKGSWVELSPQDVLQMLGRAGRPQYDTFGEGIIIT-SQTEIQYYLSLMNQ 937
Query: 341 GPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQ-LKSPE--------DQ 391
PI S + ++ E+V N+ + E V L LF + L+SP +
Sbjct: 938 Q-LPIESQLMSKLADNMNAEIVLGNIRTRDEGVDWLGYTYLFVRMLRSPGLYSVGADYEN 996
Query: 392 QTFLETTLSEIV---ASLLASKGTMLTMNEAGHLSLTSIAKAAVQAGLSHDVCLIIYSDL 448
LE ++V A++L G + + G L T + + A + H+ ++ YS
Sbjct: 997 DDALEQKRVDLVHSAATILERAGLVKYEKKTGRLQSTELGRIASHYYIGHN-SMLTYSQH 1055
Query: 449 LHNKLNFCLLNSLHML---FLVIPL 470
L + L + L F IP+
Sbjct: 1056 LQPSITTIELFRIFALSDEFKYIPV 1080
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 85/411 (20%), Positives = 177/411 (43%), Gaps = 52/411 (12%)
Query: 37 LNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKV--- 93
L + + + T + L + + + L + DE HM+ G + E VVS++
Sbjct: 1473 LERADLVLATPTQWDVLSRQWQRRKNVQTVQLFIADELHMIGG-YGGYVYEVVVSRMHSI 1531
Query: 94 -LYLKKSIQIFAMSATIGNINALSTFIEGITY-VENSRPTKHSEYVTVDKRVFQSFDGKS 151
L L+ ++I +S + N + +I + + N P H+ V ++ + +S
Sbjct: 1532 ALQLENGMRIVGLSVPLANARDIGEWIGANKHTIYNFSP--HARPVPLELHL------QS 1583
Query: 152 LTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRL--------QFDR 203
T + +L ++ +VL L + ++F ++ A+ + DR
Sbjct: 1584 FTIPHFPSLMLAMARPAYLSVLQL-SPDKPAIVFVPNRKQTRATAIDILTACATDDDEDR 1642
Query: 204 FPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLA 263
F E L+E ++E L E + +G+ Y+H L+A +++++ +
Sbjct: 1643 F---LHADVNELAPLLERVQERT-------LAESLSHGIGYYHEALSATDKKIVSHLFTI 1692
Query: 264 GTLQIICCTSTLAAGVNLPAQRVIIRDS--YVGRD--FISLNMYK--QMVGRAGRTGLQE 317
G +Q++ + + +NL A VI+ + + GR+ +I + + QM G+A R G +
Sbjct: 1693 GAIQVLLASRDVCWELNLTAHLVIVMGTQFFEGREHRYIDYPISEILQMFGKASRPGEDK 1752
Query: 318 SGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKTLI 377
G +++ ++ + +N P+ SH+ L D + ++ SS +D +
Sbjct: 1753 IGRGVLMVPAVKREY-YKKFLNEA-LPVESHLQ-AYLHDAFVTEISTRTISSTQDAVDWM 1809
Query: 378 KHTLFYQ--LKSP------EDQQTFLETTLSEIVASLLA--SKGTMLTMNE 418
+T FY+ L +P + L T LSE+V + L S+ ++ ++E
Sbjct: 1810 TYTYFYRRLLANPSFYGLTDVSHEGLSTFLSELVENTLKELSEAKIIDLDE 1860
>gi|168015535|ref|XP_001760306.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688686|gb|EDQ75062.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 826
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 162/646 (25%), Positives = 267/646 (41%), Gaps = 138/646 (21%)
Query: 65 EIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKK----------SIQIFAMSATIGNINA 114
+I LI+IDE H+L+E RG LE VVS++ L + +I+ A+SAT+ NI
Sbjct: 162 DIALILIDEVHLLSE-TRGAALEAVVSRLKMLARFPEIKGSPLSTIRFVAVSATVPNIED 220
Query: 115 LSTFIE----GIT-YVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGP 169
L+ ++ G+ + E RP K + V + F ++ L +
Sbjct: 221 LAEWLHVPKNGMKRFGEEYRPVKLTTTVLGYQPAKNDF-------LFERRLKIKFRYNA- 272
Query: 170 DAVLHLVQGNLMVLIFCSSKIACSNLALRL------QFDRFPGTKEYKKQEKEDLIEALK 223
D +LH +G L+FCS++ + A+ L + P K + ++ L A +
Sbjct: 273 DILLHHSEGK-PSLVFCSTRKGAQDTAVALSQSVSQHGNHNPFVKNLEHFKRLQL--AAQ 329
Query: 224 EENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPA 283
ND ++++CI GV YH+ L+ +R LIE +L G L ++C TSTLA GVNLPA
Sbjct: 330 RTND----VHMQQCIRSGVGYHNGGLSMEDRGLIEGLFLTGDLLVLCTTSTLAQGVNLPA 385
Query: 284 QRVIIRDS---------YVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRF 334
VII+ + YV + ++ QM GRAGR +SG +++ T +D +
Sbjct: 386 HAVIIKSTQYYNKLKGCYVEYERSAI---LQMSGRAGRPQFDDSG--VVVIMTRKDSVHL 440
Query: 335 SSMMNAGPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQLKS------- 387
+ +G EP+ S + + L E+V + + + L L+ ++K
Sbjct: 441 YHNLLSGSEPVESQLLSSIVEHLNAEIVLMTVSDCSQAIDWLKCSYLYVRIKKNPQYYCV 500
Query: 388 ----PEDQQTFLETTLSEIV---ASLLASKGTMLTMNEAGHLSLTSIAKAAVQAGLSHDV 440
P DQ LE L +I + LA G M+ +E G++ LT + +
Sbjct: 501 KQGVPRDQ---LENKLKDICVQNVNELAKYG-MVKTDEFGYV-LTPLEPGRI-------- 547
Query: 441 CLIIYSDLLHNKLNFCLLNSLHMLFLVIPLEYRIPSDGILLSRSKVYDRYTKFHPQTLRV 500
+ +M F + + +K +R T +
Sbjct: 548 -----------------MEKYYMQFETMK------------AITKAAERAT--------I 570
Query: 501 AEALGVTENLVALNVTGKLKDEKKAL--LCRFFHACILYDVLNFDNHQK------VAKMY 552
E L V N L+ +DEKK L + I Y V N + K K++
Sbjct: 571 EELLHVLANAAELSWIKLRRDEKKRLNDINGDISGRIRYHVNNSNGKLKKRIQSGAEKIF 630
Query: 553 GIQNSHLQNFLNVTSYFASK--------VYRFCEELPELWCYKQLLTDLPQTLMYCRAPN 604
+ N L +VT + S+ R C + E + + + T++ L+ +
Sbjct: 631 ILVNDALSGEPSVTDFTMSQDINGICTTGTRICRCMSEYFIFMKRFTEIRNALLLSKCLK 690
Query: 605 LR-------ALMDLPGVKIGRARQLLNAGYSSLELIARADAKEMVA 643
R L L GV + A+ L+ AG S E +A AD + + A
Sbjct: 691 QRLWESTKYQLKQLVGVGLVTAKALITAGVDSFEKLASADPRRLEA 736
>gi|403411351|emb|CCL98051.1| predicted protein [Fibroporia radiculosa]
Length = 2256
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 108/385 (28%), Positives = 185/385 (48%), Gaps = 56/385 (14%)
Query: 33 TKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSK 92
TK+Q+ + I + T EK + + + + LI+IDE H+L++ +RGP+LE ++++
Sbjct: 682 TKQQIAETQIIVTTPEKYDVITRKSTDTSYTNLVRLIIIDEIHLLHD-ERGPVLESIIAR 740
Query: 93 VL----YLKKSIQIFAMSATIGNINALSTFI-----EGITYVENS-RP-TKHSEYVTV-D 140
+ + +++ +SAT+ N ++TF+ +G+ Y + S RP ++V V +
Sbjct: 741 TIRRMEQTNEYVRLVGLSATLPNYQDVATFLRVDSSKGLFYFDASYRPCVLQQQFVGVTE 800
Query: 141 KRVFQSFDGKSLTEI-YADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRL 199
K+ + + + + E+ Y LD + G L+F S+ + A
Sbjct: 801 KKAIKRY--QVMNEVCYEKVLDQA--------------GKNQTLVFVHSRKETAKTA--- 841
Query: 200 QFDRFPGTKEYKKQEKEDLI-------EALKEENDGKLSTNLEECILYGVAYHHADLTAG 252
RF +K+ + E L EE + TNL++ + +G HHA ++
Sbjct: 842 ---RFIRDMAIEKETITQFVKPDGATREILLEETNNVKDTNLKDLLQFGFGIHHAGMSRE 898
Query: 253 ERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYV-----GRDFISLNMYK--Q 305
+R L+EE + G LQ++ CT+TLA GVNLPA VII+ + + GR ++ L+ Q
Sbjct: 899 DRGLVEELFADGHLQVLVCTATLAWGVNLPAHTVIIKGTQIYNPEKGR-WVELSSQDVLQ 957
Query: 306 MVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAAN 365
M+GRAGR GE I++ + + S+MN PI S +L EVV
Sbjct: 958 MLGRAGRPQYDTFGEGIIIT-NHSELQYYLSLMNQQ-LPIESQFVSKLADNLNAEVVLGT 1015
Query: 366 LCSSLEDVKTLIKHTLFY--QLKSP 388
+ + E V+ L +T Y LK P
Sbjct: 1016 IRNRDEAVQWL-GYTYLYVRMLKDP 1039
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 84/396 (21%), Positives = 147/396 (37%), Gaps = 84/396 (21%)
Query: 21 EEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEP 80
+E + G+ R L K + +CT + + Q + IGL++ DE ++
Sbjct: 1527 KEIVSLTGETSADLRLLEKGDLIVCTPTQWDVISRRWRQRKNVQTIGLLIADEIQLVGG- 1585
Query: 81 QRGPILECVVSKVLYLKKSIQI----FAMSATIGNINALSTFIEGI------TYVENSRP 130
+ GP E V+S+ Y+ +I A ++ N L ++ G+ + ++RP
Sbjct: 1586 EVGPTYEVVISRTRYVSAQTEIKTRIVACGVSLANARDLGEWM-GVPSHAIFNFPPSARP 1644
Query: 131 TKHSEYVTVDKRVFQSFDGKSLTEI--------YADNLDYSLTGSGPDAVLHLVQGNLMV 182
++ QSF+ + Y L+YS T V
Sbjct: 1645 LDMDIHL-------QSFNIPHFPSLMIAMSKPAYLSILEYSPTKP--------------V 1683
Query: 183 LIFCSSKIACSNLALRLQFDRF-------PGTKEYKKQEKEDLIEALKEENDGKLSTNLE 235
+IF S+ C RL D + E+EDL L +D L L+
Sbjct: 1684 IIFVPSRRQC-----RLTADDLLTHCGADDNGNRFLNIEEEDLQPHLDHVSDSGLVDTLK 1738
Query: 236 ECILYGVAYHHADLTAGERR------LIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIR 289
+GV Y+H L+ ++R L +Y+ + + C V+ P V+
Sbjct: 1739 ----HGVGYYHEALSKQDKRIDTAWSLPVASYMVIIMGVQCYEGKEHRYVDYPVMDVL-- 1792
Query: 290 DSYVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCK-TMQDFLRFSSMMNAGPEPISSH 348
QM+GRA R + +++C+ T +DF + + G PI SH
Sbjct: 1793 ---------------QMMGRACRPTEDDKSRCVLMCQQTRKDF--YKKFLAEG-LPIESH 1834
Query: 349 MDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQ 384
+ L D L + + +D ++ T FY+
Sbjct: 1835 LPTHMLHDYFLAEIGVKTIENKQDAMDILTWTYFYR 1870
>gi|400603269|gb|EJP70867.1| Sec63 Brl domain-containing protein [Beauveria bassiana ARSEF 2860]
Length = 1970
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 106/383 (27%), Positives = 187/383 (48%), Gaps = 49/383 (12%)
Query: 33 TKRQLNKKSIYICTIEKGSKLIGSLIQENR-IDEIGLIVIDEFHMLNEPQRGPILECVVS 91
TK ++ + I + T EK + + + ++ L++IDE HML++ +RG +LE +V+
Sbjct: 376 TKSEIIQTQIIVTTPEKWDVVTRKGTGDTELVQKVRLLIIDEVHMLHD-ERGAVLESLVA 434
Query: 92 K----VLYLKKSIQIFAMSATIGNINALSTFIE-----GITYVENS-RPTKHSEYVTVDK 141
+ V + I+I +SAT+ N ++ F++ G+ Y + S RP ++
Sbjct: 435 RTERQVESTQSLIRIIGLSATLPNYIDVADFLKVNKYAGLFYFDASFRPVPLEQH----- 489
Query: 142 RVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRLQ- 200
F GK+ ++ DNLD D +++ + V++F S+ A L
Sbjct: 490 --FIGVKGKAGSKQSKDNLDTVAF----DKTREMLEVDHQVMVFVHSRRDTMVTARMLHQ 543
Query: 201 -------FDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGE 253
D F T K ++ A+++ N + S ++ E + G+ HHA + +
Sbjct: 544 KAIESFCVDLFDPTSHPKYEQ------AVRDMNSSR-SKDIRELLSKGIGVHHAGMARAD 596
Query: 254 RRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS--YVGRD--FISLNMYK--QMV 307
R L+E+ + G L+++CCT+TLA GVNLPA V+I+ + Y +D F+ L + Q+
Sbjct: 597 RNLMEKLFGEGVLRVLCCTATLAWGVNLPAAAVVIKGTQVYSAQDGKFVDLGILDVLQIF 656
Query: 308 GRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAANLC 367
GRAGR +++G M+C T QD L+ +PI S LVD + +A
Sbjct: 657 GRAGRPQFEDTGIG-MIC-TTQDKLQHYLTAVTEQQPIESKFS-TKLVDNLNAEIALGTV 713
Query: 368 SSLEDVKTLIKHT-LFYQL-KSP 388
+S+ D I ++ LF ++ +SP
Sbjct: 714 TSIPDAVQWIGYSYLFVRMQRSP 736
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 106/384 (27%), Positives = 171/384 (44%), Gaps = 58/384 (15%)
Query: 28 GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILE 87
G P R + I I T EK + S + ++ L++IDE H+L RGPILE
Sbjct: 1214 GDNTPDTRTIKNADIIITTPEKWDGISRSWQTRGYVRQVSLVIIDEIHLL-AGDRGPILE 1272
Query: 88 CVVSKVLYL----KKSIQIFAMSATIGNINALSTFI---EGITYVENS-RPTKHSEYVTV 139
+VS++ Y+ K ++++ MS N + L+ ++ EG+ +S RP Y+
Sbjct: 1273 IIVSRMNYIAEMTKNAVRLLGMSTACANASDLANWLGVKEGLFNFRHSVRPVPLELYIDG 1332
Query: 140 DKRV------FQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACS 193
V QS + + I P+ V++F +S+
Sbjct: 1333 FPEVRGFCPLMQSMNRPTFLAI---------KNHSPEKP---------VIVFVASRRQTR 1374
Query: 194 NLALRLQFDRFPGTKEYKKQ----EKEDLIEALKEENDGKLSTNLEECILYGVAYHHADL 249
A L F G +E ++ ++EDL L D L +E I +G+ HHA L
Sbjct: 1375 LTAKDLI--NFCGMEEDPRRFLHMDEEDLQLNLSRVKDDAL----KEAINFGIGLHHAGL 1428
Query: 250 TAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYV------GRDFISLNMY 303
+R+L EE +L +QI+ TSTLA GVNLPA V+++ + G + L
Sbjct: 1429 VESDRQLSEELFLNNKIQILVATSTLAWGVNLPAHLVVVKGTQFYDAKIEGYRDMDLTDV 1488
Query: 304 KQMVGRAGRTGLQESGES-IMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVD--LILE 360
QM+GRAGR SG + I + +DF + ++ G P+ S + T++D L E
Sbjct: 1489 LQMLGRAGRPQFDNSGVARIFTQDSKKDF--YKHFLHTG-FPVESSLH--TVLDNHLCAE 1543
Query: 361 VVAANLCSSLEDVKTLIKHTLFYQ 384
V A + + +D + T F++
Sbjct: 1544 VSAETILTK-QDALDYLTWTFFFR 1566
>gi|395534672|ref|XP_003769364.1| PREDICTED: activating signal cointegrator 1 complex subunit 3 isoform
2 [Sarcophilus harrisii]
Length = 2198
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 103/395 (26%), Positives = 184/395 (46%), Gaps = 47/395 (11%)
Query: 14 EEFKFYLEEYAGVK-----GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGL 68
E++K +EE G + G P + + K + + T EK + S + + ++ +
Sbjct: 1386 EDWKVRIEEKLGKRVIELTGDVTPDMKSIAKADLIVTTPEKWDGISRSWQNRSYVKKVAI 1445
Query: 69 IVIDEFHMLNEPQRGPILECVVSKVLYL----KKSIQIFAMSATIGNINALSTFIE-GIT 123
++IDE H+L + +RGP+LE +VS+ ++ +K +++ +S + N L+ ++
Sbjct: 1446 LIIDEIHLLGD-ERGPVLEVIVSRTNFISSHTEKPVRVVGLSTALANARDLADWLNINQM 1504
Query: 124 YVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVL 183
+ N RP+ + V F G+ A S+ A+ VL
Sbjct: 1505 GLFNFRPSVRPVPLEVH---IHGFPGQHYCPRMA-----SMNKPAFQAIRSHSPAK-PVL 1555
Query: 184 IFCSSKIACSNLALRLQFDRFPGTKEYKKQ-------EKEDLIEALKEENDGKLSTNLEE 236
IF SS+ AL L F T++ KQ E D+I +++ +NL+
Sbjct: 1556 IFVSSRRQTRLTALELI--AFLATEDDPKQWLNMDEREMNDIIGTIRD-------SNLKL 1606
Query: 237 CILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS--YVG 294
+ +G+ HHA L +R+ +EE ++ +Q++ TSTLA GVN PA VI++ + Y G
Sbjct: 1607 TLAFGIGMHHAGLHERDRKTVEELFVNCKIQVLIATSTLAWGVNFPAHLVIVKGTEYYDG 1666
Query: 295 --RDFISLNMYK--QMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPI-SSHM 349
R ++ + QM+GRAGR + G++++L ++ F P P+ SS +
Sbjct: 1667 KTRRYVDFPITDVLQMMGRAGRPQFDDQGKAVILVHDIKK--DFYKKFLYEPFPVESSLL 1724
Query: 350 DPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQ 384
D L D + +AA +S +D I T F++
Sbjct: 1725 D--VLSDHLNAEIAAGTITSKQDAMDYITWTYFFR 1757
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 86/334 (25%), Positives = 153/334 (45%), Gaps = 31/334 (9%)
Query: 66 IGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKS----IQIFAMSATIGNINALSTFIE- 120
+ L+++DE H+L+E RGP+LE +V++ L +S I+I +SAT+ N ++TF+
Sbjct: 601 VKLLILDEVHLLHE-DRGPVLESLVARTLRQVESTQSMIRILGLSATLPNYLDVATFLHV 659
Query: 121 ----GITYVENS-RPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHL 175
G+ Y + RP + K + ++ E+ +N+ +T
Sbjct: 660 NPYIGLFYFDGRFRPVPLGQTFLGIKTTNKVQQLNNMDEVCYENVLKQITAGH------- 712
Query: 176 VQGNLMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLE 235
+MV + + + +ALR + + + + A K+ + + L
Sbjct: 713 ---QVMVFVHARNATVRTAMALREKAKNNGHICYFLPNQGPEYGHAEKQVQKSR-NKQLR 768
Query: 236 ECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS--YV 293
E G + HHA + +R L+E + G ++++ CT+TLA GVNLPA VII+ + Y
Sbjct: 769 EMFPDGFSIHHAGMLRQDRSLVENLFSHGHIKVLVCTATLAWGVNLPAHAVIIKGTQIYA 828
Query: 294 GR--DFISLNMYK--QMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHM 349
+ F+ L + Q+ GRAGR + GE I++ T D L + PI S
Sbjct: 829 AKRGSFVDLGILDVMQIFGRAGRPQFDKFGEGIII--TTHDKLSHYLTLLTQQNPIESQF 886
Query: 350 DPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFY 383
+L D + +A +++E+ I +T Y
Sbjct: 887 -LESLADNLNAEIALGTVTNVEEAVKWISYTYLY 919
>gi|391867627|gb|EIT76873.1| DNA/RNA helicase MER3/SLH1, DEAD-box superfamily [Aspergillus
oryzae 3.042]
Length = 1192
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 103/364 (28%), Positives = 167/364 (45%), Gaps = 35/364 (9%)
Query: 35 RQLNKKSIYICTIEKGSKLIGSLIQENRIDE-IGLIVIDEFHMLNEPQRGPILECVVSKV 93
R + I I T EK + R+ + + L +IDE H+L E RG LE VVS++
Sbjct: 227 RSVQNSQIIITTPEKWDSVTRKWKDHARLMQLVKLFLIDEVHILKE-SRGATLEAVVSRM 285
Query: 94 LYLKKSIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRV--FQSFDGKS 151
+ +++ A+SATI N ++T++ G P H E+ + R Q F
Sbjct: 286 KTIGSNVRFVALSATIPNSEDIATWL-GKDATNQHVPA-HREHFGEEFRPVRLQRFVYGY 343
Query: 152 LTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFC---SSKIACSNLALRLQFDRFPGTK 208
++ D + PD +L + ++IFC +S +A + RL P +
Sbjct: 344 QSQGNDFAFDKMCSSKLPD-ILAMHSCRKPIMIFCCTRNSSVATAKELARLWSMSNPPAR 402
Query: 209 EYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQI 268
+K K S L VA+HHA L G+R+ IE +L G + I
Sbjct: 403 LWKGPSK---------------SFEFNNIDLKSVAFHHAGLNPGDRQTIENGFLQGQINI 447
Query: 269 ICCTSTLAAGVNLPAQRVIIRDSYVG------RDFISLNMYKQMVGRAGRTGLQESGESI 322
ICCTSTLA GVNLP VII+++ VG +++ L + QM+GRAGR + ++
Sbjct: 448 ICCTSTLAVGVNLPCHLVIIKNT-VGWLDGGCKEYSDLEIM-QMLGRAGRPQFDKDAVAV 505
Query: 323 MLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLF 382
+L T ++ + + + +G E + S + + L E+ N+ S ++ L LF
Sbjct: 506 IL--TRKERVDYYERLVSGSESLESCLHLNLIDHLNAEIGLGNVTSVESAIRWLAGTFLF 563
Query: 383 YQLK 386
+L+
Sbjct: 564 VRLR 567
>gi|453082562|gb|EMF10609.1| pre-mRNA splicing helicase [Mycosphaerella populorum SO2202]
Length = 2197
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 117/467 (25%), Positives = 216/467 (46%), Gaps = 44/467 (9%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V E+ + K E + + E G + TK+Q+ + ++ + T EK +
Sbjct: 587 LVQEQVGNFGKRLESYGIRVAELTGDRQL---TKQQIAETNVIVTTPEKWDVITRKATDT 643
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKS----IQIFAMSATIGNINALS 116
+ + + LI IDE H+L++ RGP+LE +V++ + + ++I +SAT+ N ++
Sbjct: 644 SYTNLVRLICIDEIHLLHD-DRGPVLESIVARTIRRTEQTGDPVRIVGLSATLPNYRDVA 702
Query: 117 TFIEGITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLV 176
+F+ V+ S+ H + + Q F G +TE A ++ VL V
Sbjct: 703 SFLR----VDVSKDLFHFDGTFRPCPLKQEFIG--VTEKKAIKQLKTMNDVCYTKVLEQV 756
Query: 177 -QGNLMVLIFCSSKIACSNLA--LR---LQFDRFPGTKEYKKQEKEDLIEALKEENDGKL 230
Q +LIF S+ + A +R L+ D + E L+ E +
Sbjct: 757 GQNKNQMLIFVHSRKETAKTAKYIRDKALELDTIGQILRSDAASR----EILRSEAESCQ 812
Query: 231 STNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRD 290
+ L++ + YG HHA ++ +R +E+ + G +Q++ CT+TLA GVNLPA VII+
Sbjct: 813 NAELKDVLPYGFGIHHAGMSRADRTSVEDLFADGAIQVLVCTATLAWGVNLPAHTVIIKG 872
Query: 291 SYV----GRDFISLNMYK--QMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEP 344
+ + ++ L+ QM+GRAGR GE I++ T + + S++N P
Sbjct: 873 TQIYSPEKGSWVELSPQDVLQMLGRAGRPQYDTYGEGIIIT-TQAEIQYYLSLLNQQL-P 930
Query: 345 ISSHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLF---------YQLKSPEDQQTFL 395
I S +L E+V N+ + E V+ L LF YQ+ + DQ L
Sbjct: 931 IESQFVSKLADNLNAEIVLGNVRTRDEGVEWLSYTYLFVRMLRSPALYQVGADYDQDEIL 990
Query: 396 ETTLSEIV--ASLLASKGTMLTMN-EAGHLSLTSIAKAAVQAGLSHD 439
E +++ A+++ K +++ + ++G L + + A ++H+
Sbjct: 991 EQKRVDLIHSAAVVLEKASLIAYDKKSGRLQSKDLGRVASHYYITHN 1037
Score = 44.3 bits (103), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 49/98 (50%), Gaps = 6/98 (6%)
Query: 234 LEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS-- 291
L E + +G+AY+H L+ ++R+ + G +QI+ + A VI+ +
Sbjct: 1653 LAESLSHGIAYYHEALSDSDKRITTSLFQQGAVQILIVARDCCWEIQPAAHLVIVMGTQF 1712
Query: 292 YVGRD--FISLNMYK--QMVGRAGRTGLQESGESIMLC 325
+ GR+ +I + + QM G+AGR G + +++C
Sbjct: 1713 FEGREHRYIDYPIAEVLQMFGKAGRPGEDKDARGVLMC 1750
>gi|395534670|ref|XP_003769363.1| PREDICTED: activating signal cointegrator 1 complex subunit 3 isoform
1 [Sarcophilus harrisii]
Length = 2206
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 103/395 (26%), Positives = 184/395 (46%), Gaps = 47/395 (11%)
Query: 14 EEFKFYLEEYAGVK-----GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGL 68
E++K +EE G + G P + + K + + T EK + S + + ++ +
Sbjct: 1394 EDWKVRIEEKLGKRVIELTGDVTPDMKSIAKADLIVTTPEKWDGISRSWQNRSYVKKVAI 1453
Query: 69 IVIDEFHMLNEPQRGPILECVVSKVLYL----KKSIQIFAMSATIGNINALSTFIE-GIT 123
++IDE H+L + +RGP+LE +VS+ ++ +K +++ +S + N L+ ++
Sbjct: 1454 LIIDEIHLLGD-ERGPVLEVIVSRTNFISSHTEKPVRVVGLSTALANARDLADWLNINQM 1512
Query: 124 YVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVL 183
+ N RP+ + V F G+ A S+ A+ VL
Sbjct: 1513 GLFNFRPSVRPVPLEVH---IHGFPGQHYCPRMA-----SMNKPAFQAIRSHSPAK-PVL 1563
Query: 184 IFCSSKIACSNLALRLQFDRFPGTKEYKKQ-------EKEDLIEALKEENDGKLSTNLEE 236
IF SS+ AL L F T++ KQ E D+I +++ +NL+
Sbjct: 1564 IFVSSRRQTRLTALELI--AFLATEDDPKQWLNMDEREMNDIIGTIRD-------SNLKL 1614
Query: 237 CILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS--YVG 294
+ +G+ HHA L +R+ +EE ++ +Q++ TSTLA GVN PA VI++ + Y G
Sbjct: 1615 TLAFGIGMHHAGLHERDRKTVEELFVNCKIQVLIATSTLAWGVNFPAHLVIVKGTEYYDG 1674
Query: 295 --RDFISLNMYK--QMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPI-SSHM 349
R ++ + QM+GRAGR + G++++L ++ F P P+ SS +
Sbjct: 1675 KTRRYVDFPITDVLQMMGRAGRPQFDDQGKAVILVHDIKK--DFYKKFLYEPFPVESSLL 1732
Query: 350 DPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQ 384
D L D + +AA +S +D I T F++
Sbjct: 1733 D--VLSDHLNAEIAAGTITSKQDAMDYITWTYFFR 1765
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 86/334 (25%), Positives = 153/334 (45%), Gaps = 31/334 (9%)
Query: 66 IGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKS----IQIFAMSATIGNINALSTFIE- 120
+ L+++DE H+L+E RGP+LE +V++ L +S I+I +SAT+ N ++TF+
Sbjct: 609 VKLLILDEVHLLHE-DRGPVLESLVARTLRQVESTQSMIRILGLSATLPNYLDVATFLHV 667
Query: 121 ----GITYVENS-RPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHL 175
G+ Y + RP + K + ++ E+ +N+ +T
Sbjct: 668 NPYIGLFYFDGRFRPVPLGQTFLGIKTTNKVQQLNNMDEVCYENVLKQITAGH------- 720
Query: 176 VQGNLMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLE 235
+MV + + + +ALR + + + + A K+ + + L
Sbjct: 721 ---QVMVFVHARNATVRTAMALREKAKNNGHICYFLPNQGPEYGHAEKQVQKSR-NKQLR 776
Query: 236 ECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS--YV 293
E G + HHA + +R L+E + G ++++ CT+TLA GVNLPA VII+ + Y
Sbjct: 777 EMFPDGFSIHHAGMLRQDRSLVENLFSHGHIKVLVCTATLAWGVNLPAHAVIIKGTQIYA 836
Query: 294 GR--DFISLNMYK--QMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHM 349
+ F+ L + Q+ GRAGR + GE I++ T D L + PI S
Sbjct: 837 AKRGSFVDLGILDVMQIFGRAGRPQFDKFGEGIII--TTHDKLSHYLTLLTQQNPIESQF 894
Query: 350 DPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFY 383
+L D + +A +++E+ I +T Y
Sbjct: 895 -LESLADNLNAEIALGTVTNVEEAVKWISYTYLY 927
>gi|300772939|ref|ZP_07082808.1| DEAD/DEAH box helicase domain protein [Sphingobacterium
spiritivorum ATCC 33861]
gi|300759110|gb|EFK55937.1| DEAD/DEAH box helicase domain protein [Sphingobacterium
spiritivorum ATCC 33861]
Length = 1027
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 117/448 (26%), Positives = 211/448 (47%), Gaps = 44/448 (9%)
Query: 26 VKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPI 85
+KGQY I + T EK S +I L +++IG IV+DE M+ + RG
Sbjct: 379 MKGQY----------DICLMTYEKFSAII--LANPYILNQIGTIVVDEAQMIADKNRGVN 426
Query: 86 LECVVSKVLYLKK----SIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDK 141
LE +++ +L LK+ QI A+SA IGN+N L ++ G + RP +E +
Sbjct: 427 LEFILT-LLKLKRREGIEPQIIALSAVIGNLNGLERWLGGRLLLREERPVPLNEGIIKSN 485
Query: 142 RVFQSFDGKSLTEIYADNLDYSLTG-SGPDAVLHLVQGNLM----VLIFCSSKIACSNLA 196
F+ + + E + + S D ++ LV+ + V++F +K + A
Sbjct: 486 GHFRYIESDTEVENTTNFITPEFRKRSSQDIIIPLVRKLVSEGKNVIVFRETKSEAQSCA 545
Query: 197 LRLQFD-RFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERR 255
+ L + P E I L + + + L + + G+++H +DL ER
Sbjct: 546 VYLAANLDLPAASE--------AIRLLPKRDPSVATEKLRQVLNGGISFHISDLDPEERA 597
Query: 256 LIEEAYLA--GTLQIICCTSTLAAGVNLPAQRVIIRD-SYVGRDFISLNMYKQMVGRAGR 312
++EE + L++I T+TLA GVN PA+ VI+ + G S++ YK ++GRAGR
Sbjct: 598 VVEEQFRDRNSGLKVIVATTTLAMGVNTPAEAVIVAGLKHPGDIPYSVSEYKNIIGRAGR 657
Query: 313 TGLQESGESIMLCKT-MQDFLRFSSMMNAGPEPISSHM--DPPTLVDLILEVVAANLC-- 367
G E G S ++ T ++++ + + + A PE + S+ LIL V++A+
Sbjct: 658 LGFSERGYSFLIALTSIEEYSFWQNFIRAKPEDMQSNFISSDTDCRALILRVLSASRSKQ 717
Query: 368 --SSLEDVKTLIKHTLFYQLKSPEDQQTFLETTLSEIVASLLASKGTMLTMNEAGHLSLT 425
+ E + L++ YQ K D+ + + T+ + + L + ++ ++ G T
Sbjct: 718 GMTENEIIGFLVESFGAYQEKIKYDKWDWDQDTIGDALEKLEYHQ--LIEIDANGFFHTT 775
Query: 426 SIAKAAVQAGLSHDVCLIIYSDLLHNKL 453
I K A ++G+ + +I + D+L L
Sbjct: 776 PIGKIAGESGIELE-SVIRFVDVLRQTL 802
>gi|121719767|ref|XP_001276582.1| pre-mRNA splicing helicase, putative [Aspergillus clavatus NRRL 1]
gi|119404794|gb|EAW15156.1| pre-mRNA splicing helicase, putative [Aspergillus clavatus NRRL 1]
Length = 2209
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 119/474 (25%), Positives = 223/474 (47%), Gaps = 52/474 (10%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V E+ +L K E + + E G + TK+Q+ + + + T EK + +
Sbjct: 600 LVQEQVGNLGKRLEPYGIRVAELTGDRQL---TKQQIAETQVIVTTPEKFDVITRKASET 656
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVS----KVLYLKKSIQIFAMSATIGNINALS 116
+ + L++IDE H+L++ +RGP++E +VS KV + ++I +SAT+ N ++
Sbjct: 657 SYTKLVRLVIIDEIHLLHD-ERGPVIESIVSRTIRKVEQTGEPVRIVGLSATLPNYRDVA 715
Query: 117 TFI-----EGITYVENS-RPTK-HSEYVTV-DKRVFQSFDGKSLTEIYADNLDYSLTGSG 168
+F+ +G+ + + S RP E++ V DK+ + K++ +I + +
Sbjct: 716 SFLRVDPNKGLFHFDGSYRPCPLKQEFIGVTDKKAIKQL--KTMNDICYNKV-------- 765
Query: 169 PDAVLHLVQGNLMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEA--LKEEN 226
+ + Q +LIF S+ + A ++ D+ + + + D L EE
Sbjct: 766 ---MEQVGQKRNQMLIFVHSRKETAKTAKYIR-DKALEMETIGQILRSDAASRAILAEEA 821
Query: 227 DGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRV 286
+ +L++ + YG+ HHA L+ +R ++ + G++Q++ CT+TLA GVNLPA V
Sbjct: 822 ESVDDASLKDLLPYGLGIHHAGLSLADRDSVQALFADGSIQVLVCTATLAWGVNLPAHTV 881
Query: 287 IIRDSYV----GRDFISLNMYK--QMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNA 340
II+ + V ++ L+ QM+GRAGR GE I++ + + + S+MN
Sbjct: 882 IIKGTQVYSPEKGSWVELSPQDVLQMLGRAGRPQYDTFGEGIIIT-SQTEIQYYLSLMNQ 940
Query: 341 GPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQ-LKSPE--------DQ 391
PI S + ++ E+V N+ + E V+ L LF + L+SP +
Sbjct: 941 Q-LPIESQLVSKLADNMNAEIVLGNVRNRDEGVEWLGYTYLFVRMLRSPGLYSVGADYEN 999
Query: 392 QTFLETTLSEIV---ASLLASKGTMLTMNEAGHLSLTSIAKAAVQAGLSHDVCL 442
LE ++V A +L G + + G L T + + A + H+ L
Sbjct: 1000 DDALEQKRVDLVHSAAVILERAGLVKYEKKTGRLQSTELGRIASHYYIGHNSML 1053
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 75/367 (20%), Positives = 156/367 (42%), Gaps = 42/367 (11%)
Query: 37 LNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKV--- 93
L + + + T + L + + + L + DE HML G + E VVS++
Sbjct: 1476 LEQADLVLATPTQWDVLSRQWQRRKNVQTVQLFIADELHMLGG-FGGYVYEAVVSRMHSI 1534
Query: 94 -LYLKKSIQIFAMSATIGNINALSTFIEGITY-VENSRPTKHSEYVTVDKRVFQSFDGKS 151
L L+ ++I +S + N + ++ + + N P H+ V ++ + +S
Sbjct: 1535 ALQLENGMRIIGLSVPLANARDIGEWVGASKHTIYNFSP--HARPVPLELHL------QS 1586
Query: 152 LTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRL--------QFDR 203
T + +L ++ ++L L + L+F S+ A+ L DR
Sbjct: 1587 FTIPHFPSLMLAMAKPAYHSILQLAP-DKPALVFVPSRKQTRATAMDLLAACAADDNEDR 1645
Query: 204 FPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLA 263
F E E L+ ++E L E + +G+ Y+H L+A ++R++ +
Sbjct: 1646 F---LHADVSELEPLLSRVQERT-------LAESLTHGIGYYHEALSATDKRIVSHLFTI 1695
Query: 264 GTLQIICCTSTLAAGVNLPAQRVIIRDS--YVGRD--FISLNMYK--QMVGRAGRTGLQE 317
G +Q++ + + +NL A VI+ + + GR+ +I + + QM G+A R +
Sbjct: 1696 GAIQVLLASRDVCWELNLTAHLVIVMGTQFFDGREHRYIDYPISEILQMFGKASRPQEDK 1755
Query: 318 SGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKTLI 377
G +++ ++ + +N P+ SH+ L D + ++ +S +D +
Sbjct: 1756 IGRGVLMVPAVKREY-YKKFLNEA-LPVESHLQ-LYLHDAFVTEISTRTITSTQDAVDWM 1812
Query: 378 KHTLFYQ 384
+T FY+
Sbjct: 1813 TYTYFYR 1819
>gi|449669323|ref|XP_002165482.2| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
[Hydra magnipapillata]
Length = 2139
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 107/410 (26%), Positives = 200/410 (48%), Gaps = 45/410 (10%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V E + +K + + + E + G + +K Q++ + +CT EK + +
Sbjct: 548 LVQEMVLNFSKRLQSYDIQVSE---LTGDHQLSKEQIDSTQVIVCTPEKWDIITRKAGER 604
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQ----IFAMSATIGNINALS 116
+ LI+IDE H+L++ +RGP+LE ++++ + +S Q + +SAT+ N ++
Sbjct: 605 TYTQLVRLIIIDEIHLLHD-ERGPVLEAIIARTIRQIESTQEPVRLIGLSATLPNYEDVA 663
Query: 117 TFI-----EGITYVENS-RPTK-HSEYVTV-DKRVFQSFDGKSLTEIYADNLDYSLTGSG 168
TF+ +G+ + +NS RP +YV V +K+ + F + + E+ + + + +G
Sbjct: 664 TFMRVNVDKGLFFFDNSFRPVPLEQQYVGVTEKKAIKRF--QVMNEVVYEKV---MENAG 718
Query: 169 PDAVLHLVQGNLMVLIFCSSKIACSNLALR-LQFDRFPGTKEYKKQEKEDLIEALKEEND 227
+ VL V + + + ALR L +R T +E +E L+ E +
Sbjct: 719 KNQVL--------VFVHSRKETGKTARALRDLCLER--DTLGQFLREDSASMEVLRTEAE 768
Query: 228 GKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVI 287
+ L++ + YG A HHA ++ +R L+E+ + +Q++ T+TLA GVNLPA VI
Sbjct: 769 QVKNLELKDILPYGFAVHHAGMSRVDRTLVEDLFGDRHIQVLVSTATLAWGVNLPAHTVI 828
Query: 288 IRDSYV-----GRDFISLNMYK--QMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNA 340
I+ + V G+ ++ L QM GRAGR GE I++ + + S++N
Sbjct: 829 IKGTQVYSPEKGK-WVELGALDILQMFGRAGRPQYDTKGEGILITNHTE-LQYYLSLLNQ 886
Query: 341 GPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFY--QLKSP 388
PI S +L E+V + +++D T + +T Y L++P
Sbjct: 887 QL-PIESQFISKLADNLNAEIVLGTV-QTVKDACTWLGYTYLYIRMLRNP 934
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 84/342 (24%), Positives = 157/342 (45%), Gaps = 59/342 (17%)
Query: 37 LNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYL 96
L K +I I T +K L Q + + L ++DE H++ + GP++E + S++ Y+
Sbjct: 1420 LAKGNIIISTPDKWDVLSRRWKQRKNVQNVNLFILDELHLIG-GENGPVMEVICSRMRYI 1478
Query: 97 ----KKSIQIFAMSATIGNINALSTFIEGIT------YVENSRPTKHSEYVTVDKRVFQS 146
+K I+I A+S+++ N ++ ++ G++ + N RP
Sbjct: 1479 SSQIEKGIRIVALSSSLSNSKDIAQWL-GVSTNNIFNFHPNVRPVP-------------- 1523
Query: 147 FDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLM-------VLIFCSSKIACSNLALRL 199
E++ + + TGS A++ +++ V++F S+ AL L
Sbjct: 1524 ------LELHIQGFNITHTGSRLIAMIKPAYQSIVRLSPRKPVIVFVPSRKQSKITALDL 1577
Query: 200 QFDRFPGTKEYKKQ----EKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERR 255
F G + ++ +EDL LK + L+E + YGV Y H L+ E +
Sbjct: 1578 L--SFCGAENQPQRFLHCTEEDLQPHLKRIQE----KTLKETLTYGVGYLHEGLSDIEVK 1631
Query: 256 LIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS--YVGR-----DFISLNMYKQMVG 308
++E+ + +G +QI+ + L V+ A V+I D+ Y G+ D+ ++ QM+G
Sbjct: 1632 VVEQLFTSGAVQIMVVSRNLCWTVSTHAHLVVIVDTLYYEGKIHTYVDYPVTDVL-QMIG 1690
Query: 309 RAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMD 350
A R L +SG++++LC + + F P PI SH+D
Sbjct: 1691 LANRPLLDDSGKAVILCLSSKK--EFFKKFLYEPLPIESHLD 1730
>gi|320167619|gb|EFW44518.1| RNA helicase [Capsaspora owczarzaki ATCC 30864]
Length = 2274
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 101/374 (27%), Positives = 171/374 (45%), Gaps = 34/374 (9%)
Query: 28 GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILE 87
G + P + L++ + + T EK + S + + + LI+IDE H+L + RGP+LE
Sbjct: 1493 GDFTPDLQALHRADVIVTTPEKWDGISRSWQNRSYVKAVSLIIIDEIHLLGD-DRGPVLE 1551
Query: 88 CVVSKVLYLKKS----IQIFAMSATIGNINALSTF--IEGITYVENSRPTKHSEYVTVDK 141
+VS+ ++ S +++ +S + N L+ + I G + N +P +TV
Sbjct: 1552 VIVSRTNFISASTDHAVRVVGLSTALANARDLADWLGINGAQGLFNFKPAVRPVPLTVH- 1610
Query: 142 RVFQSFDGKSLTEIYADNLDYSLTGSGPD-AVLHLVQGNLMVLIFCSSKIACSNLALRL- 199
F G+ A T + P A + L+F SS+ AL L
Sbjct: 1611 --IHGFPGRQYCPRMA-------TMNKPAYAAIREHSPEKPALVFVSSRRQTRLTALDLI 1661
Query: 200 QF-DRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIE 258
F R K++ + +L L +D TNL + +G+ HHA L +RRL+E
Sbjct: 1662 SFCAREDNPKQFLHMPEHELEPLLDRVHD----TNLRLALSFGIGMHHAGLHEQDRRLVE 1717
Query: 259 EAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS--YVGR-----DFISLNMYKQMVGRAG 311
E ++ +QI+ TSTLA GVN PA V+++ + + G+ DF ++ QM+GRAG
Sbjct: 1718 ELFVNQKIQILIATSTLAWGVNFPAHLVVVKGTEYFDGKTHRYVDFPITDVL-QMMGRAG 1776
Query: 312 RTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAANLCSSLE 371
R ++G +++L ++ F P P+ S++ L E+VA + S
Sbjct: 1777 RPQFDDTGCAVILVHDVKK--DFYKKFLYEPFPVESNLANVLPDHLNAEIVAGTITSKQS 1834
Query: 372 DVKTLIKHTLFYQL 385
V+ L F +L
Sbjct: 1835 SVEYLTWTYFFRRL 1848
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 112/406 (27%), Positives = 182/406 (44%), Gaps = 51/406 (12%)
Query: 66 IGLIVIDEFHMLNEPQRGPILECVVSKVLY----LKKSIQIFAMSATIGNINALSTFI-- 119
+ L++IDE H+L++ RGP++E +V++ L + I+I +SAT+ N ++ F+
Sbjct: 692 VRLLIIDEVHLLHD-DRGPVIETIVARTLRQVETTQNMIRIVGLSATLPNYVDVAGFLRV 750
Query: 120 ---EGITYVENS-RPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHL 175
+G+ Y ++ RP S Q + G T I+ D + D V+
Sbjct: 751 NPYKGLFYFDSHFRPVPLS----------QRYIGVKTTNIHQQQNDMNQICF--DNVIEN 798
Query: 176 VQGNLMVLIFCSSKIACSNLALRLQFDRFPGTKE---YKKQEKEDLIEALKEENDGKLST 232
V+ V++F ++ A + AL L+ + T+ + ++ E A K+ + T
Sbjct: 799 VRKGHQVMVFVHARNATAKTALALR-EIAVSTQTLPLFSPKQDERFPAADKQFTRSRNRT 857
Query: 233 NLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIR--- 289
L++ G A HHA L +R L+E + G ++++ CT+TLA GVNLPA VII+
Sbjct: 858 -LQQLFGDGFAVHHAGLLRSDRNLVERFFADGLIKVLVCTATLAWGVNLPAHCVIIKGTQ 916
Query: 290 --DSYVGRDFISLNMYK--QMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPI 345
DS G F+ L + Q+ GRAGR GE I++ T D L M PI
Sbjct: 917 LYDSKKGA-FVDLGILDVMQIFGRAGRPQFDTHGEGIII--TAHDRLAHYLSMMTHSVPI 973
Query: 346 SSHMDPPTLVDLILEVVAANLCSSLEDVKTL---------IKHTLFYQLKSPE-DQQTFL 395
S +L EV + + E V+ L +K+ L Y + E D L
Sbjct: 974 ESQFINQLADNLNAEVALGTVANVDEAVQWLSYSYLYVRMLKNPLVYGMTGLERDNDPAL 1033
Query: 396 ---ETTLSEIVASLLASKGTMLTMNEAGHLSLTSIAKAAVQAGLSH 438
T L +I A L + M G L++T + + A + H
Sbjct: 1034 IKRRTDLIQIAARQLDAAKMMRFNERTGSLAVTDLGRTASHFYIQH 1079
>gi|259486797|tpe|CBF84947.1| TPA: pre-mRNA splicing helicase, putative (AFU_orthologue;
AFUA_8G04740) [Aspergillus nidulans FGSC A4]
Length = 2208
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 120/474 (25%), Positives = 219/474 (46%), Gaps = 52/474 (10%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V E+ ++ + + + E G + TK+Q+ + + + T EK + +
Sbjct: 600 LVQEQVENFGRRLAPYGIKVAELTGDRQL---TKQQIAETQVIVTTPEKFDVITRKASET 656
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVL----YLKKSIQIFAMSATIGNINALS 116
+ + LI+IDE H+L++ +RGP++E +VS+ + +++I +SAT+ N ++
Sbjct: 657 SYTKLVRLIIIDEIHLLHD-ERGPVIESIVSRTIRQVEQTGDAVRIVGLSATLPNYRDVA 715
Query: 117 TFI-----EGITYVENS-RPTK-HSEYVTV-DKRVFQSFDGKSLTEIYADNLDYSLTGSG 168
+F+ +G+ + + S RP E++ V DK+ + K + +I + +
Sbjct: 716 SFLRVDPAKGLFHFDGSYRPCPLKQEFIGVTDKKPIKQL--KIMNDICYNKV-------- 765
Query: 169 PDAVLHLVQGNLMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEA--LKEEN 226
+ H+ Q +LIF S+ + A L+ D+ + + K D L EE
Sbjct: 766 ---IEHVGQNRNQMLIFVHSRKETAKTAKYLR-DKALEMETIGQILKSDSASRAILAEEA 821
Query: 227 DGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRV 286
+ L++ + YG HHA L+ +R ++ + G++Q++ CT+TLA GVNLPA V
Sbjct: 822 ESVNDAALKDILPYGFGIHHAGLSLADRDSVQALFKDGSIQVLVCTATLAWGVNLPAHTV 881
Query: 287 IIRDSYV----GRDFISLNMYK--QMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNA 340
II+ + V ++ L+ QM+GRAGR GE I++ T + + S+MN
Sbjct: 882 IIKGTQVYSPEKGSWVELSPQDVLQMLGRAGRPQYDTYGEGIIIT-TQAEIQYYLSLMNQ 940
Query: 341 GPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQ-LKSPE--------DQ 391
PI S + ++ E+V N+ + E V L LF + L+SP +
Sbjct: 941 Q-LPIESQLVSKLADNMNAEIVLGNIRTRDEGVDWLGYTYLFVRMLRSPGLYSVGADYEN 999
Query: 392 QTFLETTLSEIV---ASLLASKGTMLTMNEAGHLSLTSIAKAAVQAGLSHDVCL 442
LE ++V A LL G + + G L T + + A + H+ L
Sbjct: 1000 DDALEQKRVDLVHSAAVLLEKAGLVKYDKKTGRLQSTELGRIASHYYIGHNSML 1053
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 88/400 (22%), Positives = 174/400 (43%), Gaps = 57/400 (14%)
Query: 66 IGLIVIDEFHMLNEPQRGPILECVVSKV----LYLKKSIQIFAMSATIGNINALSTFIEG 121
+ L V DE HML G + E VVS++ L + ++I +S + N + +I
Sbjct: 1505 VELFVADELHMLGG-YGGYVYEVVVSRMHSIALQTESGMRIVGLSVPLSNARDIGEWIGA 1563
Query: 122 ITY-VENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQ--G 178
+ + N P H+ V ++ + QSF + L + P A L ++Q
Sbjct: 1564 SKHTIYNFSP--HARPVPLELHI-QSFSIPHFPSLM-------LAMARP-AYLSILQLSA 1612
Query: 179 NLMVLIFCSSKIACSNLALRL--------QFDRFPGTKEYKKQEKEDLIEALKEENDGKL 230
+ LIF ++ A+ L DRF +E + L+ + E
Sbjct: 1613 DKPALIFVPNRKQTRATAIDLLTACSIDDDEDRF---LHADIEELQPLLGRVHERT---- 1665
Query: 231 STNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRD 290
L E + +G+ Y+H L+ ++R++ Y G +Q++ + + +NL V++
Sbjct: 1666 ---LAESLSHGIGYYHEALSQTDKRIVSHLYNIGAIQVVIASRDVCWELNLTGHLVVVMG 1722
Query: 291 S--YVGRD--FISLNMYK--QMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEP 344
+ + GR+ +I + + QM G+A R G + G +++ T++ + +N P
Sbjct: 1723 TQFFEGREHRYIDYPISEILQMFGKASRPGQDKVGRGVLMVPTVKREY-YKKFLNEA-LP 1780
Query: 345 ISSHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQ--LKSP------EDQQTFLE 396
+ SH+ + D + ++ +S +D + +T FY+ L +P + L
Sbjct: 1781 VESHLQ-LYMHDAFVTEISQGTIASTQDSVDWLTYTYFYRRLLANPSFYGLTDISHEGLS 1839
Query: 397 TTLSEIVASLLA--SKGTMLTMNEAGHLSLTSIAKAAVQA 434
T LSE+V + L S+ ++ ++E S++ + A++ A
Sbjct: 1840 TFLSELVENTLKELSEAKIIDLDEEDD-SVSPLNAASIGA 1878
>gi|390599685|gb|EIN09081.1| Sec63-domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 2173
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 109/417 (26%), Positives = 198/417 (47%), Gaps = 59/417 (14%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V E+ K +F + E G TK+Q+ + I + T EK +
Sbjct: 566 LVQEQVGQFQKRLGDFGIKVGELTGDSQM---TKQQIAETQIIVTTPEKWDVITRKSTDT 622
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKS----IQIFAMSATIGNINALS 116
+ + + LI+IDE H+L++ +RGP+LE +V++ + + +++ +SAT+ N ++
Sbjct: 623 SYTNLVRLIIIDEIHLLHD-ERGPVLESIVARTVRRMEQTGEYVRLVGLSATLPNYQDVA 681
Query: 117 TFI-----EGITYVE-NSRPTK-HSEYVTV-DKRVFQSFDGKSLTEI-YADNLDYSLTGS 167
TF+ +G+ Y + +SRP ++V V +K+ + + + + E+ Y LD++
Sbjct: 682 TFLRVDEKKGLFYFDASSRPCPLQQQFVGVTEKKAIKRY--QVMNEVCYEKVLDHA---- 735
Query: 168 GPDAVLHLVQGNLMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLI-------E 220
G V++F S+ + A +F +K+ + E
Sbjct: 736 ----------GKNQVIVFVHSRKETAKTA------KFIRDMAIEKETITQFVKPDSATRE 779
Query: 221 ALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVN 280
L +E + + NL++ + +G A HHA +T +R +E+ + +Q++ CT+TLA GVN
Sbjct: 780 ILNDEANNAMDANLKDLLPFGFAIHHAGMTRQDRTAVEDLFGDNHIQVLVCTATLAWGVN 839
Query: 281 LPAQRVIIRDSYV-----GRDFISLNMYK--QMVGRAGRTGLQESGESIMLCKTMQDFLR 333
LPA VII+ + + GR ++ L+ QM+GRAGR GE +++ +
Sbjct: 840 LPAHAVIIKGTQIYNPEKGR-WVELSHQDVLQMLGRAGRPQYDTFGEGVIIT-NHSELQY 897
Query: 334 FSSMMNAGPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFY--QLKSP 388
+ S+MN PI S +L E+V + + E V+ L +T Y LKSP
Sbjct: 898 YLSLMNQQ-LPIESQFVSKLADNLNAEIVLGTIRNRDEAVQWL-GYTYLYVRMLKSP 952
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 83/381 (21%), Positives = 154/381 (40%), Gaps = 38/381 (9%)
Query: 21 EEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEP 80
+E + G+ R L K + +CT + + Q + +GL++ DE L
Sbjct: 1423 KEIVALTGETSADLRHLEKGDVIVCTPTQWDVISRRWRQRKNVQTVGLVIADEIQTLGG- 1481
Query: 81 QRGPILECVVSKVLYLKKSIQI----FAMSATIGNINALSTFIEGITY-VENSRPTKHSE 135
G E ++S+ Y+ +I A + ++ N L +I ++ + N P+
Sbjct: 1482 FNGQTYEVIISRTRYVSAQTEIKTRIVACAVSMANARDLGEWIGAPSHAIFNFPPSARPL 1541
Query: 136 YVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIAC--- 192
+ + + F SL + ++ P V+IF S+ C
Sbjct: 1542 DMDIHLQSFSIPHFPSLMIAMSKPAYLAIAEYAP---------TKPVIIFVPSRRQCRLT 1592
Query: 193 -SNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTA 251
+L D P + E DL L D L E + +G+ Y+H LT
Sbjct: 1593 ADDLLTHCGADDDPN--RFLNIELADLQPHLDHVTD----QGLVETLKHGIGYYHEALTR 1646
Query: 252 GERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIR--DSYVGR-----DFISLNMYK 304
++R++E + +G +Q++ + A + + + VII Y G+ D+ +++
Sbjct: 1647 QDKRIVERLFQSGAIQVLIASKDSAWSLPVSSYMVIIMGVQYYEGKEHRYVDYQVMDVL- 1705
Query: 305 QMVGRAGRTGLQESGESIMLC-KTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVA 363
QM+GRA R E +++C +T +D+ F + G PI SH+ L D L +A
Sbjct: 1706 QMMGRACRPLEDERSRCVLMCQQTRKDY--FKKFLAEG-LPIESHLS-SNLHDYFLAEIA 1761
Query: 364 ANLCSSLEDVKTLIKHTLFYQ 384
+ +D ++ T FY+
Sbjct: 1762 VKTIENKQDAMDILTWTYFYR 1782
>gi|219127338|ref|XP_002183894.1| Mer3 meiotic cross-over helicase [Phaeodactylum tricornutum CCAP
1055/1]
gi|217404617|gb|EEC44563.1| Mer3 meiotic cross-over helicase [Phaeodactylum tricornutum CCAP
1055/1]
Length = 1710
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 103/424 (24%), Positives = 185/424 (43%), Gaps = 59/424 (13%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTK--RQLNKKSIYICTIEKGSKLIGSLI 58
+ E+Y+ + +E + + G P++ R L + + T EK L
Sbjct: 572 LCEERYEDWGRRLSGMNLGVE-VSLITGDGDPSESFRDLASSHLILTTPEKWDSLTRRWT 630
Query: 59 QENRI-DEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKS-----------------I 100
++ + + L ++DE H++ + RG LE ++ ++ ++++ +
Sbjct: 631 EKFYLFATVKLFLVDEVHLIADENRGCTLESIICRMKSIQRAARNKDTTSSDVSTSRSCM 690
Query: 101 QIFAMSATIGNINALSTFI---EGITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIY- 156
++ A+SAT+ NI ++TF+ E + + RP + + + F G S Y
Sbjct: 691 RVVAVSATLPNIAEIATFLGANEAYVFDQTYRPVPLAVHA-----IGVGFVGDSSQSQYR 745
Query: 157 -ADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEK 215
+D + ++H + ++FC +K LA L +
Sbjct: 746 FWSGMDREVP-----QIIHRFSKSRPTIVFCHTKADTEKLADLLATAHGIAVRGNSNAGV 800
Query: 216 EDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTL 275
+ LK L+ + G+AYHHA L AG+RR++E A+ G ++++C TSTL
Sbjct: 801 AGQTKLLK----------LQRVLFAGIAYHHAGLEAGDRRIVERAFSDGNIRVLCATSTL 850
Query: 276 AAGVNLPAQRVIIRDSYVGRDFISLNMYK--------QMVGRAGRTGLQESGESIMLCKT 327
A GVNLPA V+I+ + R N Y+ QM+GRAGR G SG ++++
Sbjct: 851 AMGVNLPAHLVVIKGTKAWRG--GGNGYQDLDQATILQMIGRAGRPGFDTSGTAVIMTDN 908
Query: 328 MQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHT-LFYQLK 386
+ + F ++ +G P S + L D+I ++ + S E IK T LF QL+
Sbjct: 909 -KSKVYFVNLATSGLRPAKSRLM-TKLDDIINAEISQRVVESREAAFNWIKSTLLFIQLR 966
Query: 387 SPED 390
D
Sbjct: 967 GNPD 970
>gi|30697481|ref|NP_200922.2| U5 small nuclear ribonucleoprotein helicase [Arabidopsis thaliana]
gi|332010042|gb|AED97425.1| U5 small nuclear ribonucleoprotein helicase [Arabidopsis thaliana]
Length = 2146
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 110/404 (27%), Positives = 181/404 (44%), Gaps = 36/404 (8%)
Query: 21 EEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEP 80
+E + G Y P L I I T EK + + + + ++GL+++DE H+L
Sbjct: 1420 KEMVEMTGDYTPDLVALLSADIIISTPEKWDGISRNWHTRSYVKKVGLVILDEIHLLG-A 1478
Query: 81 QRGPILECVVSKVLYL----KKSIQIFAMSATIGNINALSTFIE-GITYVENSRPTKHSE 135
RGPILE +VS++ Y+ ++S++ +S + N L+ ++ G + N +P+
Sbjct: 1479 DRGPILEVIVSRMRYISSQTERSVRFVGLSTALANAGDLADWLGVGEIGLFNFKPSVRPV 1538
Query: 136 YVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNL 195
+ V Q + GK Y ++ + H VLIF SS+
Sbjct: 1539 PIEVH---IQGYPGK----YYCPRMNSMNKPAYAAICTH--SPTKPVLIFVSSRRQTRLT 1589
Query: 196 ALRLQFDRFPGTKEYKKQ----EKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTA 251
AL L +F + E+ +Q +EDL L + D NL + +G+ HHA L
Sbjct: 1590 ALDLI--QFAASDEHPRQFLSVSEEDLQMVLSQITD----QNLRHTLQFGIGLHHAGLND 1643
Query: 252 GERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS--YVGR-----DFISLNMYK 304
+R +EE + +Q++ TSTLA GVNLPA VII+ + + G+ DF L
Sbjct: 1644 HDRSAVEELFTNNKIQVLVSTSTLAWGVNLPAHLVIIKGTEYFDGKTKRYVDF-PLTEIL 1702
Query: 305 QMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAA 364
QM+GRAGR + G++++L + F P P+ S + E+V+
Sbjct: 1703 QMMGRAGRPQFDQHGKAVILVHEPKK--SFYKKFLYEPFPVESSLKEKLHDHFNAEIVSG 1760
Query: 365 NLCSSLEDVKTLIKHTLFYQLKSPEDQQTFLETTLSEIVASLLA 408
+ + + V L LF +L + LE T E + S L+
Sbjct: 1761 TIGNKEDAVHYLTWTYLFRRLMA-NPAYYGLEGTQDETICSYLS 1803
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 97/359 (27%), Positives = 167/359 (46%), Gaps = 38/359 (10%)
Query: 33 TKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSK 92
TK +L + + + T EK + + + L++IDE H+LN+ RG ++E +V++
Sbjct: 602 TKTELEETQMIVTTPEKWDVITRKSSDMSMSMLVKLLIIDEVHLLND-DRGAVIEALVAR 660
Query: 93 VLYLKKS----IQIFAMSATIGNINALSTFIE-----GITYVENS-RPTK-HSEYVTVDK 141
L +S I+I +SAT+ + ++ F+ G+ Y ++S RP +Y+ + +
Sbjct: 661 TLRQVESTQTMIRIVGLSATLPSYLQVAQFLRVNTDTGLFYFDSSYRPVPLAQQYIGITE 720
Query: 142 RVFQSFDGKSLTEI-YADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRL- 199
F + + + L EI Y +D + QG+ +IF S+ S A +L
Sbjct: 721 HNFAARN-ELLNEICYKKVVD------------SIKQGH-QAMIFVHSRKDTSKTAEKLV 766
Query: 200 QFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEE 259
R T + E + +K++ + +L + G HHA + +R L E
Sbjct: 767 DLARQYETLDLFTNETHPQFQLMKKDVMKSRNKDLVKFFEAGFGIHHAGMLRSDRTLTER 826
Query: 260 AYLAGTLQIICCTSTLAAGVNLPAQRVIIR-----DSYVG--RDFISLNMYKQMVGRAGR 312
+ G L+++ CT+TLA GVNLPA V+I+ D+ G +D L++ Q+ GRAGR
Sbjct: 827 LFSDGLLKVLVCTATLAWGVNLPAHTVVIKGTQLYDAKAGGWKDLGMLDVM-QIFGRAGR 885
Query: 313 TGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAANLCSSLE 371
+SGE I++ T D L + + PI S +L EVV + + E
Sbjct: 886 PQFDKSGEGIII--TSHDKLAYYLRLLTSQLPIESQFISSLKDNLNAEVVLGTVTNVKE 942
>gi|297793665|ref|XP_002864717.1| hypothetical protein ARALYDRAFT_919354 [Arabidopsis lyrata subsp.
lyrata]
gi|297310552|gb|EFH40976.1| hypothetical protein ARALYDRAFT_919354 [Arabidopsis lyrata subsp.
lyrata]
Length = 2112
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 110/404 (27%), Positives = 181/404 (44%), Gaps = 36/404 (8%)
Query: 21 EEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEP 80
+E + G Y P L I I T EK + + + + ++GL+++DE H+L
Sbjct: 1387 KEMVEMTGDYTPDLVALLSADIIISTPEKWDGISRNWHTRSYVKKVGLVILDEIHLLGA- 1445
Query: 81 QRGPILECVVSKVLYL----KKSIQIFAMSATIGNINALSTFIE-GITYVENSRPTKHSE 135
RGPILE +VS++ Y+ ++S++ +S + N L+ ++ G + N +P+
Sbjct: 1446 DRGPILEVIVSRMRYISSQTERSVRFVGLSTALANAGDLADWLGVGEIGLFNFKPSVRPV 1505
Query: 136 YVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNL 195
+ V Q + GK Y ++ + H VLIF SS+
Sbjct: 1506 PIEVH---IQGYPGK----YYCPRMNSMNKPAYAAICTH--SPTKPVLIFVSSRRQTRLT 1556
Query: 196 ALRLQFDRFPGTKEYKKQ----EKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTA 251
AL L +F + E+ +Q +EDL L + D NL + +G+ HHA L
Sbjct: 1557 ALDLI--QFAASDEHPRQFLSVSEEDLQMVLSQITD----QNLRHTLQFGIGLHHAGLND 1610
Query: 252 GERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS--YVGR-----DFISLNMYK 304
+R +EE + +Q++ TSTLA GVNLPA VII+ + + G+ DF L
Sbjct: 1611 HDRSAVEELFTNNKIQVLVSTSTLAWGVNLPAHLVIIKGTEYFDGKTKRYVDF-PLTEIL 1669
Query: 305 QMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAA 364
QM+GRAGR + G++++L + F P P+ S + E+V+
Sbjct: 1670 QMMGRAGRPQFDQHGKAVILVHEPKK--SFYKKFLYEPFPVESSLKEKLHDHFNAEIVSG 1727
Query: 365 NLCSSLEDVKTLIKHTLFYQLKSPEDQQTFLETTLSEIVASLLA 408
+ + + V L LF +L + LE T E + S L+
Sbjct: 1728 TIGNKEDAVHYLTWTYLFRRLMA-NPAYYGLEGTQDETICSYLS 1770
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 97/359 (27%), Positives = 167/359 (46%), Gaps = 38/359 (10%)
Query: 33 TKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSK 92
TK +L + + + T EK + + + L++IDE H+LN+ RG ++E +V++
Sbjct: 568 TKSELEETQMIVTTPEKWDVITRKSSDMSLSMLVKLLIIDEVHLLND-DRGAVIEALVAR 626
Query: 93 VLYLKKS----IQIFAMSATIGNINALSTFIE-----GITYVENS-RPTK-HSEYVTVDK 141
L +S I+I +SAT+ + ++ F+ G+ Y ++S RP +Y+ + +
Sbjct: 627 TLRQVESTQTMIRIVGLSATLPSYLQVAQFLRVNPDTGLFYFDSSYRPVPLAQQYIGITE 686
Query: 142 RVFQSFDGKSLTEI-YADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRL- 199
F + + + L EI Y +D + QG+ +IF S+ S A +L
Sbjct: 687 HNFAARN-ELLNEICYKKVVD------------SIKQGH-QAMIFVHSRKDTSKTAEKLV 732
Query: 200 QFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEE 259
R T + E + +K++ + +L + G HHA + +R L E
Sbjct: 733 DLARQYETLDLFANETHPQCQLMKKDVMKSRNKDLVKFFEAGFGIHHAGMLRSDRTLTER 792
Query: 260 AYLAGTLQIICCTSTLAAGVNLPAQRVIIR-----DSYVG--RDFISLNMYKQMVGRAGR 312
+ G L+++ CT+TLA GVNLPA V+I+ D+ G +D L++ Q+ GRAGR
Sbjct: 793 LFSDGLLKVLVCTATLAWGVNLPAHTVVIKGTQLYDAKAGGWKDLGMLDVM-QIFGRAGR 851
Query: 313 TGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAANLCSSLE 371
+SGE I++ T D L + + PI S +L EVV + + E
Sbjct: 852 PQFDKSGEGIII--TSHDKLAYYLRLLTSQLPIESQFISSLKDNLNAEVVLGTVTNVKE 908
>gi|448320994|ref|ZP_21510477.1| DEAD/DEAH box helicase [Natronococcus amylolyticus DSM 10524]
gi|445604887|gb|ELY58828.1| DEAD/DEAH box helicase [Natronococcus amylolyticus DSM 10524]
Length = 786
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 109/394 (27%), Positives = 188/394 (47%), Gaps = 60/394 (15%)
Query: 63 IDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEG- 121
+ +I + VIDE H+L+ +RG +LE +S++ L + +I A+SAT+ N++ ++ +++
Sbjct: 134 VTDIDVCVIDEVHLLDADRRGSVLEVTISRLRRLCEP-RIVALSATMPNVDDVAAWLDAP 192
Query: 122 ----ITYVENSRPTK---------HSEYVTVDK--RVFQSFDGKSLTEIYADNLDYSLTG 166
+ E RP + H + DK R++++ D L E
Sbjct: 193 EEATFEFGEEYRPVELNAGVRTYTHGDNAFADKYRRLYRALD---LAEP----------- 238
Query: 167 SGPDAVLHLVQGNLMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDL-IEALKEE 225
HL + + L+F SS+ A + + + + D EA + E
Sbjct: 239 -------HLRE-DGQSLVFVSSRQDTVRAAEKARDEIAERDIPMGARGDYDFHTEAQELE 290
Query: 226 NDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQR 285
ND L +L GVA+HHA L+ +R L+EE + AG ++++ TSTLA GVNLPA+
Sbjct: 291 ND-----TLRNSVLDGVAFHHAGLSKNDRDLVEEWFKAGHVELLFSTSTLAWGVNLPARC 345
Query: 286 VIIRDSYVGR------DFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMN 339
V+IRD+ + D L++ QM+GRAGR G + G ++C T + ++ ++
Sbjct: 346 VVIRDTKLHDPLEGEVDMSPLDVL-QMLGRAGRPGYDDVGYGWVVCDTAE-ADKYRRLLR 403
Query: 340 AGPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFY---QLKSPEDQQTFLE 396
G E I S + TL + +A + LEDV ++ T +Y Q K E L
Sbjct: 404 DGKE-IESRL-AETLETHLNAEIAMGTITDLEDVMDWLETTFYYVRGQSKPEEYDFPNLR 461
Query: 397 TTLSEIVASLLASKGTMLTMNEAGHLSLTSIAKA 430
+ + + L+ +G + M E+G LS+ + +
Sbjct: 462 QRVRDCLEGLV-DRG-FVAMGESGDLSIEATPRG 493
>gi|334188537|ref|NP_001190584.1| U5 small nuclear ribonucleoprotein helicase [Arabidopsis thaliana]
gi|9759460|dbj|BAB10376.1| RNA helicase [Arabidopsis thaliana]
gi|332010043|gb|AED97426.1| U5 small nuclear ribonucleoprotein helicase [Arabidopsis thaliana]
Length = 2157
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 110/404 (27%), Positives = 181/404 (44%), Gaps = 36/404 (8%)
Query: 21 EEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEP 80
+E + G Y P L I I T EK + + + + ++GL+++DE H+L
Sbjct: 1431 KEMVEMTGDYTPDLVALLSADIIISTPEKWDGISRNWHTRSYVKKVGLVILDEIHLLG-A 1489
Query: 81 QRGPILECVVSKVLYL----KKSIQIFAMSATIGNINALSTFIE-GITYVENSRPTKHSE 135
RGPILE +VS++ Y+ ++S++ +S + N L+ ++ G + N +P+
Sbjct: 1490 DRGPILEVIVSRMRYISSQTERSVRFVGLSTALANAGDLADWLGVGEIGLFNFKPSVRPV 1549
Query: 136 YVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNL 195
+ V Q + GK Y ++ + H VLIF SS+
Sbjct: 1550 PIEVH---IQGYPGK----YYCPRMNSMNKPAYAAICTH--SPTKPVLIFVSSRRQTRLT 1600
Query: 196 ALRLQFDRFPGTKEYKKQ----EKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTA 251
AL L +F + E+ +Q +EDL L + D NL + +G+ HHA L
Sbjct: 1601 ALDLI--QFAASDEHPRQFLSVSEEDLQMVLSQITD----QNLRHTLQFGIGLHHAGLND 1654
Query: 252 GERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS--YVGR-----DFISLNMYK 304
+R +EE + +Q++ TSTLA GVNLPA VII+ + + G+ DF L
Sbjct: 1655 HDRSAVEELFTNNKIQVLVSTSTLAWGVNLPAHLVIIKGTEYFDGKTKRYVDF-PLTEIL 1713
Query: 305 QMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAA 364
QM+GRAGR + G++++L + F P P+ S + E+V+
Sbjct: 1714 QMMGRAGRPQFDQHGKAVILVHEPKK--SFYKKFLYEPFPVESSLKEKLHDHFNAEIVSG 1771
Query: 365 NLCSSLEDVKTLIKHTLFYQLKSPEDQQTFLETTLSEIVASLLA 408
+ + + V L LF +L + LE T E + S L+
Sbjct: 1772 TIGNKEDAVHYLTWTYLFRRLMA-NPAYYGLEGTQDETICSYLS 1814
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 97/359 (27%), Positives = 167/359 (46%), Gaps = 38/359 (10%)
Query: 33 TKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSK 92
TK +L + + + T EK + + + L++IDE H+LN+ RG ++E +V++
Sbjct: 602 TKTELEETQMIVTTPEKWDVITRKSSDMSMSMLVKLLIIDEVHLLND-DRGAVIEALVAR 660
Query: 93 VLYLKKS----IQIFAMSATIGNINALSTFIE-----GITYVENS-RPTK-HSEYVTVDK 141
L +S I+I +SAT+ + ++ F+ G+ Y ++S RP +Y+ + +
Sbjct: 661 TLRQVESTQTMIRIVGLSATLPSYLQVAQFLRVNTDTGLFYFDSSYRPVPLAQQYIGITE 720
Query: 142 RVFQSFDGKSLTEI-YADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRL- 199
F + + + L EI Y +D + QG+ +IF S+ S A +L
Sbjct: 721 HNFAARN-ELLNEICYKKVVD------------SIKQGH-QAMIFVHSRKDTSKTAEKLV 766
Query: 200 QFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEE 259
R T + E + +K++ + +L + G HHA + +R L E
Sbjct: 767 DLARQYETLDLFTNETHPQFQLMKKDVMKSRNKDLVKFFEAGFGIHHAGMLRSDRTLTER 826
Query: 260 AYLAGTLQIICCTSTLAAGVNLPAQRVIIR-----DSYVG--RDFISLNMYKQMVGRAGR 312
+ G L+++ CT+TLA GVNLPA V+I+ D+ G +D L++ Q+ GRAGR
Sbjct: 827 LFSDGLLKVLVCTATLAWGVNLPAHTVVIKGTQLYDAKAGGWKDLGMLDVM-QIFGRAGR 885
Query: 313 TGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAANLCSSLE 371
+SGE I++ T D L + + PI S +L EVV + + E
Sbjct: 886 PQFDKSGEGIII--TSHDKLAYYLRLLTSQLPIESQFISSLKDNLNAEVVLGTVTNVKE 942
>gi|325109476|ref|YP_004270544.1| DEAD/DEAH box helicase [Planctomyces brasiliensis DSM 5305]
gi|324969744|gb|ADY60522.1| DEAD/DEAH box helicase domain protein [Planctomyces brasiliensis
DSM 5305]
Length = 801
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 91/351 (25%), Positives = 157/351 (44%), Gaps = 37/351 (10%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSL--I 58
+ +K+ + AA + F E+ + G R++N + + + L+ L I
Sbjct: 77 LTEQKFAEIQAAAVRWGFAPEDVGLITGN-----RKVNPDARVLVVV--AEILLNRLLDI 129
Query: 59 QENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTF 118
+ R E +V+DEFH N+P+RG + E + L K +++ +SAT+GN
Sbjct: 130 DQERFKETFAVVMDEFHSFNDPERGAVWELTLG---LLPKHVRLMLLSATVGNAP----- 181
Query: 119 IEGITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQG 178
E ++++ N K + D++V +F ++ + L+ G +
Sbjct: 182 -EFLSWLRNEHGRKLRLVQSHDRKVPLTFRWIP-DQMLDEQLELMCEGDEDNR------- 232
Query: 179 NLMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGK-LSTNLEEC 237
+ L+FC ++ C +A +L+ G + K+ ++ L L E G+ T L+
Sbjct: 233 RVPALVFCFNRAECWTIAEQLK-----GKRLVSKEHQKKLAARLDEYEWGRGAGTKLKPI 287
Query: 238 ILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVG--- 294
++ GV HHA + RR++EE + L + CT TLAAG+NLPA+ V+++ G
Sbjct: 288 LMRGVGVHHAGILPRYRRIVEELFQEKLLSVCMCTETLAAGINLPARSVVLKSLLKGPPG 347
Query: 295 -RDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQ-DFLRFSSMMNAGPE 343
+ I + QM GRAGR SG L LRF + PE
Sbjct: 348 KKKLIDASSAHQMFGRAGRPQFDSSGYVFALPDEDDVKILRFKERYDQIPE 398
>gi|156406753|ref|XP_001641209.1| predicted protein [Nematostella vectensis]
gi|156228347|gb|EDO49146.1| predicted protein [Nematostella vectensis]
Length = 2147
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 114/449 (25%), Positives = 212/449 (47%), Gaps = 56/449 (12%)
Query: 28 GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILE 87
G + TK Q++ I +CT EK + + + LI+IDE H+L++ RGP+LE
Sbjct: 571 GDHNLTKEQIHGTQIIVCTPEKWDIITRKSGERTFTQLVRLIIIDEIHLLHD-DRGPVLE 629
Query: 88 CVVSKVLYLKKSIQ----IFAMSATIGNINALSTFI-----EGITYVENS-RPTKHSEYV 137
+V++ + ++ Q + +SAT+ N ++TF+ +G+ + +NS RP V
Sbjct: 630 SLVARTIRQIETTQELVRLVGLSATLPNYEDVATFMRVNPAKGLFFFDNSFRP------V 683
Query: 138 TVDKRVFQSFDGKSLTEIYADN-LDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLA 196
++++ + K + + A N + Y V H + ++V + + A + A
Sbjct: 684 PLEQQFIGITEKKPIKRMQATNEVVYE------KVVEHAGKNQVLVFVHSRKETAKTAKA 737
Query: 197 LR---LQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGE 253
+R L+ D +E E L+ E + + L++ + YG A HHA ++ +
Sbjct: 738 VRDMCLERDSL----GLFLREDSASTEVLRSEAEQVKNGELKDLLPYGFAIHHAGMSRVD 793
Query: 254 RRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYV-----GRDFISLNMYK--QM 306
R L+E+ + +Q++ T+TLA GVNLPA VII+ + V GR ++ L QM
Sbjct: 794 RTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQVYSPEKGR-WVELGALDILQM 852
Query: 307 VGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAANL 366
+GRAGR GE I++ + + + S+MN P+ S +L EVV ++
Sbjct: 853 LGRAGRPQYDTKGEGILIT-SHGELQYYLSLMNQQ-LPVESQFISKLADNLNAEVVLGSV 910
Query: 367 CSSLEDVKTLIKHTLFY--QLKSPE---------DQQTFLETTLSEIV---ASLLASKGT 412
++ +D + +T Y L++P ++ LE ++++ ASLL
Sbjct: 911 QTA-KDAVHWLGYTYLYIRMLRNPALYGISHDEIEKDPLLEQRRADLIHSAASLLDKNNL 969
Query: 413 MLTMNEAGHLSLTSIAKAAVQAGLSHDVC 441
+ ++G+ +T + + A L+H+
Sbjct: 970 LKYDKKSGNFQVTELGRIASHYYLTHETV 998
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 85/376 (22%), Positives = 164/376 (43%), Gaps = 60/376 (15%)
Query: 37 LNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLY- 95
L K ++ + T EK L Q + + L ++DE H++ GP++E + S++ Y
Sbjct: 1419 LAKGNVVVSTPEKWDVLSRRWKQRKNVQNVSLFIMDEAHLIGG-DTGPVMEIICSRMRYI 1477
Query: 96 ---LKKSIQIFAMSATIGNINALSTFIEGI------TYVENSRPTKHSEYVTVDKRVFQS 146
L+++I+I A+S+++ N ++ ++ G+ + N RP
Sbjct: 1478 SSQLERTIRIVALSSSLANAKDVAQWL-GVPSTGLFNFHPNVRPVP-------------- 1522
Query: 147 FDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLM-------VLIFCSSKIACSNLALRL 199
E++ + + T S A+ V +M ++F S+ LAL +
Sbjct: 1523 ------LELHIQGFNITHTSSRLIAMTKPVYQAIMKHSPKKPAVVFVPSRRQTKLLALDI 1576
Query: 200 QFDRFPGTKEYKKQ----EKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERR 255
F G ++ ++DL + D L+E + YG+A+ H L+ E +
Sbjct: 1577 L--TFSGADNEPQRFLHCTEDDLNPFVSRLTD----KTLKETVTYGIAFLHEGLSDAEVK 1630
Query: 256 LIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS--YVGR-----DFISLNMYKQMVG 308
++ + + +G +Q++ + TL VNL A V++ D+ Y G+ D+ ++ M+G
Sbjct: 1631 IVNQLFTSGAIQVVVVSRTLCLSVNLSAHLVVVMDTQFYEGKTHSYADYPVTDVL-HMIG 1689
Query: 309 RAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAANLCS 368
A R L ++G++++LC+ + F P PI SH+D TL D V
Sbjct: 1690 HASRPLLDDAGKAVILCQASKK--EFFKKFLYEPLPIESHLD-HTLHDHFNAEVVTKTIE 1746
Query: 369 SLEDVKTLIKHTLFYQ 384
+ +D + T Y+
Sbjct: 1747 NKQDAVDYLTWTFLYR 1762
>gi|403416917|emb|CCM03617.1| predicted protein [Fibroporia radiculosa]
Length = 981
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 90/310 (29%), Positives = 150/310 (48%), Gaps = 49/310 (15%)
Query: 41 SIYICTIEKGSKLIGSLIQENRI-DEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKS 99
SI I T EK L + +I +I L ++DE H+LNE RG +E ++S++ +
Sbjct: 155 SIIITTGEKWDSLTRNWRDHGQILSQIQLFLVDEVHILNE-SRGSTMEVILSRMKTRGSA 213
Query: 100 IQIFAMSATIGNINALSTFI-----EG----ITYVENSRPTKHSEYVTVDKRVFQSFDGK 150
++ +SAT+ NI ++++I EG + + E RP K S++V R D
Sbjct: 214 VRFVVVSATVPNIEDVASWIGNGTPEGSATVMQFGEEFRPCKLSKFVYGIHRKKDQNDF- 272
Query: 151 SLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRLQFDRFPGTKEY 210
++ LD+ L ++L + L+FCS+++ G+ E+
Sbjct: 273 ----VFQKTLDFRLY-----SILQQHSADKPTLVFCSTRVV--------------GSAEH 309
Query: 211 KKQEKEDLIEALKEENDGKLS--------TNLEECILYGVAYHHADLTAGERRLIEEAYL 262
+E ED ++ LS LE+ G+ HHA ++ +RR E+ +L
Sbjct: 310 ILKEYEDAVQKKAPLPWTHLSRIEHTFQDKRLEKLAARGIGVHHAGMSMEDRRTTEDMFL 369
Query: 263 AGTLQIICCTSTLAAGVNLPAQRVIIRDSYV-----GRDFISLNMYKQMVGRAGRTGLQE 317
LQ++ TSTLA GVNLPA VII+ + +++ L++ QM+GRAGR +
Sbjct: 370 KKILQVLFATSTLAVGVNLPAHTVIIKGVKIFQNNSSQEYSDLDIM-QMMGRAGRPQFDK 428
Query: 318 SGESIMLCKT 327
G +I+LC+T
Sbjct: 429 EGIAIILCET 438
>gi|402079479|gb|EJT74744.1| hypothetical protein GGTG_08582 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 1594
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 89/315 (28%), Positives = 151/315 (47%), Gaps = 34/315 (10%)
Query: 42 IYICTIEKGSKLIGSLIQENRIDE-IGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSI 100
I + T EK + ++ E + L +IDE H+L + RG LE VV ++ + ++
Sbjct: 423 IIVTTPEKWDSITRKWADHRKLLELVELFLIDEVHILKD-ARGATLEAVVCRMKTIGANV 481
Query: 101 QIFAMSATIGNINALSTFIEGITYVENSRPTKHSEY------VTVDKRVFQSFDGKSLTE 154
+ A+SAT+ N ++ + G + P + + V +DK V+ G +
Sbjct: 482 RFIALSATVPNSEDVARWF-GRDHTNPHLPARRETFGEELRPVRLDKHVYGEHCGGN-DW 539
Query: 155 IYADNLDYSLTGSGPDAVLHL-VQGNLMVLIFCSSKIACSNLALRLQ--FDRFP-GTKEY 210
++ LD + P H Q +++FC ++ +C A RL + P GTK +
Sbjct: 540 VFDTYLDKKII---PALSKHTRKQDPKPIMVFCFTRKSCETTAQRLSEAWSVAPAGTKLW 596
Query: 211 KKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIIC 270
+KE ++ + L + + GVA HHA L G+R +E +YL G L +IC
Sbjct: 597 PAPKKEISVK----------NKTLRDIVHTGVAVHHAGLDFGDRTTVERSYLNGDLHVIC 646
Query: 271 CTSTLAAGVNLPAQRVIIRDSYVGRDFISLNMYK-----QMVGRAGRTGLQESGESIMLC 325
CTSTLA GVNLP V+++ + +G L+ Y QM+GRAGR S +I+
Sbjct: 647 CTSTLAVGVNLPCHTVVLKGT-MGYSDGRLSEYSDLEVMQMLGRAGRPQFDNSAVAIIFT 705
Query: 326 KTMQDFLRFSSMMNA 340
+ ++ R++ M++
Sbjct: 706 RP-ENKARYADMVSG 719
>gi|319411720|emb|CBQ73764.1| related to HFM1-DNA/RNA helicase [Sporisorium reilianum SRZ2]
Length = 1281
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 101/381 (26%), Positives = 175/381 (45%), Gaps = 65/381 (17%)
Query: 39 KKSIYICTIEKGSKLIGSLIQENRI-DEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLK 97
K + + T EK L + + I I L++IDE H+LNE QRG LE VV++
Sbjct: 245 KSRLIVTTPEKWDSLTRRWDEHSGILSTIRLLLIDEVHILNESQRGARLEVVVTRTKTRG 304
Query: 98 KSIQIFAMSATIGNINALSTFI----------------EGITYVENSRPTKHSEYV---- 137
++ A+SAT+ N+ ++ +I E + ++ RP ++V
Sbjct: 305 NHVRFVAVSATVPNLEDVAAWIGPNLNVQRPDTMPRTAEIFQFDDSYRPCPLQKHVYGYP 364
Query: 138 -TVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLA 196
D+ FQ++ L E+ +D G LIFC+++ + A
Sbjct: 365 KGKDEFAFQAYLNHKLAEL----VDTHAAGR-------------PCLIFCATRRSTLQAA 407
Query: 197 LRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLS---------TNLEECILYGVAYHHA 247
+ R KK ++ AL + G + +L G+A+HHA
Sbjct: 408 NTIAEAR-------KKAQQNGGSAALAAKEAGGRTGLQGATFDDADLMTLTASGIAFHHA 460
Query: 248 DLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS--YVGR--DFISLNMY 303
L+ +RR +E+A+LA + ++CCT+TLA G+NLPA VIIR + + G+ L++
Sbjct: 461 GLSISDRRSVEQAFLADKIGVLCCTTTLATGINLPAYCVIIRGTKQFDGQWCQMSELDLI 520
Query: 304 KQMVGRAGRTGLQESGESIMLCK-TMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVV 362
QM+GRAGR SG ++++C+ TMQ R + +G I S + P LV+ + +
Sbjct: 521 -QMMGRAGRPQFDRSGVAVIMCEDTMQAHYR---ELVSGTRDIESSL-APCLVEHVNAEI 575
Query: 363 AANLCSSLEDVKTLIKHTLFY 383
++ + ++ I+ + +
Sbjct: 576 GLRGRTTEQQIEDWIRQSFMW 596
>gi|225560917|gb|EEH09198.1| helicase family member [Ajellomyces capsulatus G186AR]
Length = 1455
Score = 110 bits (274), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 98/372 (26%), Positives = 166/372 (44%), Gaps = 50/372 (13%)
Query: 35 RQLNKKSIYICTIEKGSKLIGSLIQENR-IDEIGLIVIDEFHMLNEPQRGPILECVVSKV 93
R + +I I T EK + + I + L +IDE H+L E RG LE VVS++
Sbjct: 260 RNVQNANIIITTPEKWDSMTRKWKDHIKLIQLVKLFLIDEVHILKE-TRGATLEAVVSRM 318
Query: 94 LYLKKSIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSFDGKSLT 153
+ +++ A+SAT+ N + ++ PT ++++ + F G+
Sbjct: 319 KSVDSNVRFVALSATVPNSEDIGAWL-------GKDPT--NQHLPAYRERF----GEEFR 365
Query: 154 EIYADNLDYSLTGSGPD------------AVLHLVQGNLMVLIFC---SSKIACSNLALR 198
+ Y +G D VL +IFC +S IA S +
Sbjct: 366 PVKLQKFVYGYHSNGNDFAFDKACEARLPEVLEKHSKKKPTMIFCCTRNSAIATSKYLAK 425
Query: 199 LQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIE 258
L P + + + ++ + + ++ I GVA+HHA L A +R +E
Sbjct: 426 LWTSTNPPNRLWNGPARPVAVQNPELRD-------IQATISAGVAFHHAGLDACDRHAVE 478
Query: 259 EAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGRD-----FISLNMYKQMVGRAGRT 313
+L+G + +ICCTSTLA GVNLP VII+++ +D + L M QM+GRAGR
Sbjct: 479 NGFLSGQINVICCTSTLAVGVNLPCYLVIIKNTVSWQDNCCKEYPDLEMM-QMLGRAGRP 537
Query: 314 GLQESGESIMLCKTMQDFLRFSSMMNAGPEPISS--HMDPPTLVDLILEVVAANLCSSLE 371
+S +++L T ++ L + + AG EP+ S H+ L+D + + + +E
Sbjct: 538 QFDDSAVAVIL--TRKERLDYYEKLVAGTEPLESCLHL---KLIDHLNSEIGLGTVTDVE 592
Query: 372 DVKTLIKHTLFY 383
+ T F+
Sbjct: 593 SATRWLAGTFFF 604
>gi|123462144|ref|XP_001316881.1| Type III restriction enzyme, res subunit family protein
[Trichomonas vaginalis G3]
gi|121899600|gb|EAY04658.1| Type III restriction enzyme, res subunit family protein
[Trichomonas vaginalis G3]
Length = 1961
Score = 110 bits (274), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 130/524 (24%), Positives = 227/524 (43%), Gaps = 73/524 (13%)
Query: 2 VHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQEN 61
+ +K++S A + K + EY G T +L++ I + T EK +
Sbjct: 228 ITDKFRS---ALKHLKIIVHEYTGDTSL---TSLELDRSHILVATPEKWDVATRKAGENA 281
Query: 62 RIDEIGLIVIDEFHMLNEPQRGPILECVVSKVL----YLKKSIQIFAMSATIGNINALST 117
+ L++IDE H+L + +RGP+LE +V++ L + I+I +SAT+ N ++
Sbjct: 282 PAARLKLLIIDEIHLLQD-ERGPVLEALVARTLRQVEQQQSMIRIVGLSATLPNYTDVAN 340
Query: 118 FI----EGITYV-ENSRPTK------HSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTG 166
F+ +G+ + RP ++ T K V QS + L E+ + + +
Sbjct: 341 FLRVNDQGMFFFGPEYRPVPLAMTIVGAKDTTKTKTVEQS---EVLNELLSQGKEKDIAQ 397
Query: 167 ---SGPDAVLHLVQGNLMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALK 223
D + ++ VL+F ++ SN A + + K Q +D+ + L
Sbjct: 398 IDVVAIDLLREIIDDGQQVLVFVHTRQETSNFAQLI-------ARNIKIQVSKDVSKLLT 450
Query: 224 EENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPA 283
+ N + L + + G+ HHA L +R +E+ + ++QI+ CT+TLA GVNLPA
Sbjct: 451 KRN---CQSQLRDALSKGIGIHHAGLPRQDRIFVEQLFRTNSIQILVCTATLAWGVNLPA 507
Query: 284 QRVIIRDSYV------GRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSM 337
VII+ + V G + I + QM GRAGR SG +I++ + SS+
Sbjct: 508 HTVIIKGTQVYNQDRGGFEDIGILDVHQMFGRAGRPQFDTSGHAILITQEKIVSKYLSSL 567
Query: 338 MNAGPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQLKSPEDQQTFLET 397
+ +PI S L D + +A +S D ++T Y + P+D T +
Sbjct: 568 FYS--DPIESKFQ-KRLEDFLNAEIALGTVTSRRDALIWARYTFMY-CRLPDDSIT--NS 621
Query: 398 TLSEIVASL---LASKGTMLTMN-EAGHLSLTSIAKAAVQAGLSHDVCLIIYSDLLHNKL 453
L +A+L L + T++T + + HL + + H ++D LH K+
Sbjct: 622 RLDSAIAALNDNLMIRTTLVTQSLQPTHLGQVASIHYIPFTAVRH------FNDTLHGKM 675
Query: 454 NFCLLNSLHMLFLVIPLEYRIPSD--GILLSRSKVYDRYTKFHP 495
+ L L+ SD G L+ R YD + P
Sbjct: 676 DESQL-----------LDAVFTSDIFGSLIVRKNEYDEMEGYQP 708
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 98/418 (23%), Positives = 188/418 (44%), Gaps = 38/418 (9%)
Query: 28 GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILE 87
G++ P + K S+ + T EK + + + +GL+VIDE H+L RG I+E
Sbjct: 1072 GEFTPDSNAIAKASLIVATPEKWDAVSRGFVVRRFVQTVGLVVIDEAHLLGT-DRGHIIE 1130
Query: 88 CVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSF 147
VV ++ + ++ +S + N ++ F+ G++ V + K + F
Sbjct: 1131 AVVDRMKSMPTKVRFIGLSTCLSNPLDVAEFL-GVSRRGTYNFPPQMRAVPL-KTFIRGF 1188
Query: 148 DGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRL-QFDRFPG 206
G+ A S+ DA+ + L+F S+ A L + G
Sbjct: 1189 PGRHFCPRMA-----SMNKPLSDAIREY-SNDKPTLVFVPSRRQTRLTAFDLISYATNRG 1242
Query: 207 TKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTL 266
Y + L A ++ D LS C+ G+ HHA L + + ++EE + +G +
Sbjct: 1243 EPFYYTTPETAL--ASQKVQDQTLS----HCLSLGIGLHHAGLVSSDCEIVEELFASGKM 1296
Query: 267 QIICCTSTLAAGVNLPAQRVIIRDSYVGRDF----------ISLNMYKQMVGRAGRTGLQ 316
+++ T+TLA GVNLPA V+I+ G +F S +QM+GRAGR
Sbjct: 1297 KLLVATATLAWGVNLPAHFVVIK----GTEFHDAKTCQYVPYSSTEMQQMMGRAGRPQFD 1352
Query: 317 ESGESIMLCKT-MQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKT 375
G ++LC+ +DFL+ +N+ P P+ S++ E+ + + S + + +
Sbjct: 1353 TEGIVMILCEEGRKDFLK--RFINS-PLPVESNLFEHASEHANAEIASGRI-KSKKSLMS 1408
Query: 376 LIKHTLFYQLKSPEDQQTFLETTLSEIVASLLA--SKGTMLTMNEAGHLSLTSIAKAA 431
+K + F+ ++ ++ + TL E+ ++++ + +++N GH++ T + A
Sbjct: 1409 WLKRS-FFAIRLDKNPGYYENITLEEVSSNIIKALTDKHCISVNLEGHINPTPEGRIA 1465
>gi|452988805|gb|EME88560.1| hypothetical protein MYCFIDRAFT_149183 [Pseudocercospora fijiensis
CIRAD86]
Length = 1964
Score = 110 bits (274), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 100/373 (26%), Positives = 177/373 (47%), Gaps = 34/373 (9%)
Query: 33 TKRQLNKKSIYICTIEKGSKLIGSLIQENR-IDEIGLIVIDEFHMLNEPQRGPILECVVS 91
TK ++ I + T EK + + + ++ L++IDE HML++ +RG +LE +V+
Sbjct: 379 TKAEIVATQIIVTTPEKWDVVTRKSTGDTELVQKVRLLIIDEVHMLHD-ERGAVLESLVA 437
Query: 92 K----VLYLKKSIQIFAMSATIGNINALSTFIE-----GITYVENS-RPTKHSEYVTVDK 141
+ V + I+I +SAT+ N ++ F++ G+ Y + S RP ++
Sbjct: 438 RTERQVESTQSLIRIIGLSATLPNYIDVADFLKVNRMAGLFYFDQSFRPVPLEQH----- 492
Query: 142 RVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRL-Q 200
F GK T+ +NLD + + V +++ +++F S+ A +L +
Sbjct: 493 --FIGVKGKPGTKSSRENLDNTCF----EKVKEMLELGHQIMVFVHSRKDTVKTARQLYE 546
Query: 201 FDRFPG-TKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEE 259
G T + + E +ALK+ K + E + G+ HHA + +R L+E
Sbjct: 547 MATEQGMTDLFDPSQSEGYSQALKDVKQSK-GREIRELVQKGMGTHHAGMPRSDRNLVER 605
Query: 260 AYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYV----GRDFISLNMYK--QMVGRAGRT 313
+ G L+++CCT+TLA GVNLPA VII+ + + F+ + + Q+ GRAGR
Sbjct: 606 LFAEGVLKVLCCTATLAWGVNLPAAAVIIKGTQLYSAEAGKFVDVGILDVLQIFGRAGRP 665
Query: 314 GLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAANLCSSLEDV 373
Q++G ++L T QD L+ +PI S + +L E+ + S E +
Sbjct: 666 QFQDTGIGMIL--TTQDKLQHYLTAVTQQQPIESQFSRKLVDNLNAEIALGTVTSVPEAI 723
Query: 374 KTLIKHTLFYQLK 386
L LF ++K
Sbjct: 724 TWLGYSYLFVRMK 736
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 88/312 (28%), Positives = 136/312 (43%), Gaps = 41/312 (13%)
Query: 28 GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILE 87
G P R + I + T EK + S + + ++ L++IDE H+L RGPILE
Sbjct: 1218 GDNTPDTRTIRDADIIVTTPEKWDGISRSWQTRSYVQQVSLVIIDEIHLLGG-DRGPILE 1276
Query: 88 CVVSKVLYL----KKSIQIFAMSATIGNINALSTFI---EGITYVENS-RPTKHSEYVT- 138
+VS++ Y+ K S++I MS N L+ ++ EG+ +S RP Y+
Sbjct: 1277 IIVSRMNYIASQKKGSVRIVGMSTACANAMDLANWLGVKEGLFNFRHSVRPVPLEIYIDG 1336
Query: 139 -VDKRVF----QSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACS 193
+R F +S + + I A H + ++V + + +
Sbjct: 1337 FPQQRGFCPLMESMNRPTFLAIKA----------------HSPEKPVIVFVASRRQTRLT 1380
Query: 194 NLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGE 253
AL + + K +EDL L D L E I +G+ HHA L +
Sbjct: 1381 ARALINLCGMEDNPRRFMKMSEEDLALNLDRVKDDAL----REAISFGIGLHHAGLVESD 1436
Query: 254 RRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYV------GRDFISLNMYKQMV 307
R+L EE + +QI+ TSTLA GVNLPA V+++ + G + L QM+
Sbjct: 1437 RQLAEELFANNKIQILVATSTLAWGVNLPAHLVVVKGTQFFDAKIEGYKDMDLTDVLQML 1496
Query: 308 GRAGRTGLQESG 319
GRAGR SG
Sbjct: 1497 GRAGRPQFDTSG 1508
>gi|238882193|gb|EEQ45831.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 1091
Score = 110 bits (274), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 110/371 (29%), Positives = 171/371 (46%), Gaps = 62/371 (16%)
Query: 36 QLNKKSIYICTIEKGSKLIGSLIQENRI-DEIGLIVIDEFHMLNEPQRGPILECVVSKVL 94
+ K +I + T EK + +R+ I ++++DE H+L E RG LE V++++
Sbjct: 90 NVRKSNIIVSTPEKWDMITRKWKDYSRLFGLIKILLVDEIHILKE-SRGSTLEVVMTRMK 148
Query: 95 YLKKSIQIFAMSATIGNINALSTFI----------EGITYVENSRPTKHSEYV-----TV 139
+ ++I A+SAT+ N +S +I E + + E RP K S+ V T
Sbjct: 149 RICIGLRILAISATVANAIDISKWIGLYDESTLPAETLCFGEEFRPVKLSKIVYGYKPTS 208
Query: 140 DKRV-FQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALR 198
D F F L E V++ VLIFCS++ +C N A
Sbjct: 209 DNDFQFDIFLNSKLIE-----------------VINRHSNGKSVLIFCSTRNSCQNTAKY 251
Query: 199 LQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIE 258
L F+ T + D+ LK+ + +T G+AYHHA LT G+R+ IE
Sbjct: 252 L-FNNLSETT------RTDI--KLKDRDAMNYATK-------GIAYHHAGLTFGDRKSIE 295
Query: 259 EAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS--YVGRDF--ISLNMYKQMVGRAGRTG 314
A+L L+I+C TSTLA G+NLPA VII+ + +V F S QMVGRAGR
Sbjct: 296 IAFLNSRLKILCSTSTLAVGINLPAYLVIIKGTKCWVESSFQEYSETDVLQMVGRAGRPQ 355
Query: 315 LQESGESIMLCKTMQDFLRFSSMMNAGPEPISS--HMDPPTLVDLILEVVAANLCSSLED 372
+ G ++++ T F + G E I S HM+ + + ++ + ++ED
Sbjct: 356 FERDGVAVIM--TSIKFKHRYERIIEGTEKIESSLHMN---FREHLAAEISVGVIKNIED 410
Query: 373 VKTLIKHTLFY 383
+K T Y
Sbjct: 411 ALVWLKSTYLY 421
>gi|433605479|ref|YP_007037848.1| DEAD/DEAH box helicase domain protein [Saccharothrix espanaensis
DSM 44229]
gi|407883332|emb|CCH30975.1| DEAD/DEAH box helicase domain protein [Saccharothrix espanaensis
DSM 44229]
Length = 1142
Score = 110 bits (274), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 139/306 (45%), Gaps = 31/306 (10%)
Query: 26 VKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPI 85
+ G+Y ++ +++ T EK + + + + E+G +V+DE H+L P RG +
Sbjct: 446 LSGEYAVDVERVRAADLWVATTEKFEAICRAASLQAALGEVGCLVVDEIHLLGTPGRGAL 505
Query: 86 LECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQ 145
LE ++++V ++I +SAT+ N ++ ++E RP++ VT
Sbjct: 506 LEALLARVRGADSPVRIVGLSATVSNAAEVAEWLEADLVATTWRPSR----VTWQLPTVP 561
Query: 146 SFDGKSLTEIYADNLDYSLTGSGPDAVLHLV-QGNLMVLIFCSSKIACSNLALRLQFDRF 204
+ G + + + LT H QG+ VL+FC SK + A+ + +R
Sbjct: 562 AGSGFAANARLREQVVVDLT------TRHTADQGS--VLVFCGSKRNVRSTAMAIAAERG 613
Query: 205 PGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAG 264
+ + L + C GV H+AD + E A+
Sbjct: 614 APVHTVAADDVDGLTKV---------------CADVGVRLHYADYE--HKHAAERAFRER 656
Query: 265 TLQIICCTSTLAAGVNLPAQRVIIRDSYVGRDFISLNMYKQMVGRAGRTGLQES-GESIM 323
++ TST+AAGVNLPA+ VI+RD+ VG + + +M QM GRAGR G E+ G S +
Sbjct: 657 QADVLVATSTVAAGVNLPARAVIVRDTTVGGEPMDTSMVLQMFGRAGRIGAGETEGWSYL 716
Query: 324 LCKTMQ 329
+ Q
Sbjct: 717 VVDEHQ 722
>gi|336265892|ref|XP_003347716.1| HFM1/MER3 protein [Sordaria macrospora k-hell]
gi|380091250|emb|CCC11107.1| putative HFM1/MER3 protein [Sordaria macrospora k-hell]
Length = 1566
Score = 110 bits (274), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 88/311 (28%), Positives = 148/311 (47%), Gaps = 42/311 (13%)
Query: 35 RQLNKKSIYICTIEKGSKLIGSLIQENR--IDEIGLIVIDEFHMLNEPQRGPILECVVSK 92
R++ + SI + T EK + Q++R + + L +IDE H+L + RG LE VVS+
Sbjct: 365 RRVGEASIIVTTPEKWDSITRKW-QDHRKLLQLVELFLIDEVHILKD-VRGATLEAVVSR 422
Query: 93 VLYLKKSIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSFDGKSL 152
+ + +++ A+SAT+ N + ++ ++ G + P H E VF G+
Sbjct: 423 MKTIGANVRFVALSATVPNSDDIAKWL-GRNHTTQQLPA-HRE-------VF----GEEF 469
Query: 153 TEIYADNLDYSLTGSGPDAVLHLVQGNLM------------VLIFCSSKIACSNLALRLQ 200
+ Y +G D + + + +L+FC ++ +C + A L
Sbjct: 470 RPVKLQKFVYGYECNGNDFIFDKFMDSKLPKLLSKHSQRKPILVFCFTRKSCESTAAMLA 529
Query: 201 FDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEA 260
D K + + + ++ +S L+E + +GVA+HHA L A +R IE+
Sbjct: 530 ED-------ASKLSESKALWPIPKKRIPVVSRELQEIVQFGVAFHHAGLDAQDRVAIEQH 582
Query: 261 YLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGRDFISLNMYK-----QMVGRAGRTGL 315
+L G L +ICCTSTLA GVNLP V+++ + D L Y QM+GRAGR
Sbjct: 583 FLNGELSVICCTSTLAVGVNLPCHTVVMKGTVAFMD-DKLQEYSDLEVMQMLGRAGRPQF 641
Query: 316 QESGESIMLCK 326
S +I+L +
Sbjct: 642 DTSATAIILTR 652
>gi|358372711|dbj|GAA89313.1| pre-mRNA splicing helicase [Aspergillus kawachii IFO 4308]
Length = 2232
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 123/479 (25%), Positives = 226/479 (47%), Gaps = 55/479 (11%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V E+ +L K E + + E +G + TK+Q+ + I + T EK + +
Sbjct: 603 LVQEQVGNLGKRLEPYGIKVAELSGDRQL---TKQQIAETQIIVTTPEKFDVITRKASET 659
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVS----KVLYLKKSIQIFAMSATIGNINALS 116
+ + L+VIDE H+L++ RGP++E +VS KV ++I +SAT+ N ++
Sbjct: 660 SYTRLVRLVVIDEIHLLHD-DRGPVIESIVSRTIRKVEQTGDPVRIVGLSATLPNYRDVA 718
Query: 117 TF-----IEGITYVENS-RPTK-HSEYVTV-DKRVFQSFDGKSLTEIYADNLDYSLTGSG 168
+F ++G+ + + S RP E++ V DK+ + K++ +I + +
Sbjct: 719 SFLRVDPLKGLFHFDGSYRPCPLKQEFIGVTDKKAIKQL--KTMNDICYNKV-------- 768
Query: 169 PDAVLHLVQGNLMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEA--LKEEN 226
+ + Q +LIF S+ + A ++ D+ + + + D L EE
Sbjct: 769 ---LEQVGQRRNQMLIFVHSRKETAKTAKYIR-DKALEMETIGQILRSDAASRAILAEEA 824
Query: 227 DGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRV 286
+ +L++ + YG+ HHA L+ +R ++ + G++Q++ CT+TLA GVNLPA V
Sbjct: 825 ETVDDPSLKDLLPYGLGIHHAGLSLADRDSVQALFSDGSIQVLVCTATLAWGVNLPAHTV 884
Query: 287 IIRDSYV----GRDFISLNMYK--QMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNA 340
II+ + + ++ L+ QM+GRAGR GE I++ + + + S+MN
Sbjct: 885 IIKGTQIYSPEKGSWVELSPQDVLQMLGRAGRPQYDTFGEGIIIT-SQTEIQYYLSLMNQ 943
Query: 341 GPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQ-LKSP---------ED 390
PI S + ++ E+V N+ + E V L LF + L+SP ED
Sbjct: 944 Q-LPIESQLMSKLADNMNAEIVLGNIRTRDEGVDWLGYTYLFVRMLRSPGLYSVGADYED 1002
Query: 391 QQTFLETTLSEIV---ASLLASKGTMLTMNEAGHLSLTSIAKAAVQAGLSHDVCLIIYS 446
+ LE ++V A +L G + + G L T + + A + H+ ++ YS
Sbjct: 1003 DEA-LEQKRVDLVHSAAVILERAGLVKYDKKTGRLQSTELGRIASHYYIGHN-SMLTYS 1059
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 74/369 (20%), Positives = 156/369 (42%), Gaps = 42/369 (11%)
Query: 35 RQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKV- 93
R L + + + T + L + + + L + DE ML G + E VVS++
Sbjct: 1477 RLLERADLVLATPTQWDVLSRQWRKRKNVRAVQLFIADEIQMLGG-YGGYVYEVVVSRMH 1535
Query: 94 ---LYLKKSIQIFAMSATIGNINALSTFIEGITY-VENSRPTKHSEYVTVDKRVFQSFDG 149
L + ++I +S + N L +I + + N P H+ V ++ +
Sbjct: 1536 SMALETESGMRIVGLSVPLANARDLGEWIGANKHTIYNFSP--HARPVPLELHI------ 1587
Query: 150 KSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRL--------QF 201
+S T + +L ++ ++L L + ++F S+ + A+ L
Sbjct: 1588 QSFTIPHFPSLMLAMARPAYLSILQL-SPDKPAIVFVPSRKQTRSTAMDLLAACATDDDE 1646
Query: 202 DRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAY 261
DRF + +L L N+ L+ E + +G+ Y+H L+A ++R++ +
Sbjct: 1647 DRF------LNADVNELAPLLSRINERTLA----ESLSHGIGYYHEALSATDKRIVSHLF 1696
Query: 262 LAGTLQIICCTSTLAAGVNLPAQRVIIRDS--YVGRD--FISLNMYK--QMVGRAGRTGL 315
G +Q++ + + ++L A V++ + + GR+ +I + + QM G+A R G
Sbjct: 1697 SIGAIQVLLASRDVCWELDLTAHLVVVMGTQFFEGREHRYIDYPISEILQMFGKASRPGE 1756
Query: 316 QESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKT 375
+ G +++ ++ + +N P+ SH+ L D + ++ S +D
Sbjct: 1757 DKIGRGVLMVPAVKREY-YKKFLNEA-LPVESHLQ-AYLHDAFVTEISTRTIGSTQDAID 1813
Query: 376 LIKHTLFYQ 384
+ HT FY+
Sbjct: 1814 WMTHTYFYR 1822
>gi|219963257|gb|ACL68183.1| meiotic helicase [Sordaria macrospora]
Length = 1561
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 88/311 (28%), Positives = 148/311 (47%), Gaps = 42/311 (13%)
Query: 35 RQLNKKSIYICTIEKGSKLIGSLIQENR--IDEIGLIVIDEFHMLNEPQRGPILECVVSK 92
R++ + SI + T EK + Q++R + + L +IDE H+L + RG LE VVS+
Sbjct: 360 RRVGEASIIVTTPEKWDSITRKW-QDHRKLLQLVELFLIDEVHILKD-VRGATLEAVVSR 417
Query: 93 VLYLKKSIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSFDGKSL 152
+ + +++ A+SAT+ N + ++ ++ G + P H E VF G+
Sbjct: 418 MKTIGANVRFVALSATVPNSDDIAKWL-GRNHTTQQLPA-HRE-------VF----GEEF 464
Query: 153 TEIYADNLDYSLTGSGPDAVLHLVQGNLM------------VLIFCSSKIACSNLALRLQ 200
+ Y +G D + + + +L+FC ++ +C + A L
Sbjct: 465 RPVKLQKFVYGYECNGNDFIFDKFMDSKLPKLLSKHSQRKPILVFCFTRKSCESTAAMLA 524
Query: 201 FDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEA 260
D K + + + ++ +S L+E + +GVA+HHA L A +R IE+
Sbjct: 525 ED-------ASKLSESKALWPIPKKRIPVVSRELQEIVQFGVAFHHAGLDAQDRVAIEQH 577
Query: 261 YLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGRDFISLNMYK-----QMVGRAGRTGL 315
+L G L +ICCTSTLA GVNLP V+++ + D L Y QM+GRAGR
Sbjct: 578 FLNGELSVICCTSTLAVGVNLPCHTVVMKGTVAFMD-DKLQEYSDLEVMQMLGRAGRPQF 636
Query: 316 QESGESIMLCK 326
S +I+L +
Sbjct: 637 DTSATAIILTR 647
>gi|255086537|ref|XP_002509235.1| predicted protein [Micromonas sp. RCC299]
gi|226524513|gb|ACO70493.1| predicted protein [Micromonas sp. RCC299]
Length = 2072
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 119/442 (26%), Positives = 202/442 (45%), Gaps = 58/442 (13%)
Query: 33 TKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSK 92
++ Q++ + + T EK + + L++IDE H+L++ RGP+LE +V++
Sbjct: 492 SRSQIDDTQVIVTTPEKWDIITRKSGDRTYTQLVRLLIIDEIHLLHD-SRGPVLESIVAR 550
Query: 93 ----VLYLKKSIQIFAMSATIGNINALSTFI-----EGITYVENS-RPTK-HSEYVTVD- 140
V ++ +++ +SAT+ N ++ F+ +G+ +NS RP +++ V
Sbjct: 551 TVRQVETTQEMVRLVGLSATLPNFEDVAAFLRINPSKGLFVFDNSFRPCPLQQQFIGVTV 610
Query: 141 KRVFQSFDGKSLTEI-YADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRL 199
K+ Q F + + EI Y L+ + G +IF S+ + A +
Sbjct: 611 KKPLQRF--QVMNEICYEKVLENA--------------GKSQTIIFVHSRKETAKTAKAM 654
Query: 200 QFDRFPGTKEYKKQEKEDLI--EALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLI 257
+ D T + + KED E L E + S +L + + YG A HHA +T +R L+
Sbjct: 655 R-DTALETDQLARFLKEDSASREILITEAEQCRSADLRDLLPYGFAIHHAGMTRADRTLV 713
Query: 258 EEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYV------GRDFISLNMYKQMVGRAG 311
EE + G +Q++ T+TLA GVNLPA VII+ + + G D +S QM+GRAG
Sbjct: 714 EELFADGHVQVLVSTATLAWGVNLPAHTVIIKGTQMYNPEKGGWDELSFQDVMQMMGRAG 773
Query: 312 RTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAANLCSSLE 371
R GE I++ + + + S++N PI S L EVV + S
Sbjct: 774 RPQFDTFGEGIIITQ-HSELQYYLSLLNQ-QLPIESQFVNNLADALNAEVVLGTVQDS-R 830
Query: 372 DVKTLIKHTLFY--QLKSP----------EDQQTFLETTLSEIV---ASLLASKGTMLTM 416
D + +T Y L++P ED T LE ++++ A+ L G
Sbjct: 831 DAVNWLGYTYLYVRMLRNPNLYGVGIDALEDDPT-LEMRRADLIHTAATQLDKAGLCRYD 889
Query: 417 NEAGHLSLTSIAKAAVQAGLSH 438
+GHL T + + A +SH
Sbjct: 890 RRSGHLQATDLGRIASHYYISH 911
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 72/335 (21%), Positives = 132/335 (39%), Gaps = 44/335 (13%)
Query: 37 LNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLY- 95
L K + I T ++ + Q + + L + DE H++ GP +E V S++ Y
Sbjct: 1340 LEKGQVVIATPQQWDVISRRWKQRKNVQNVSLFIADELHLIGG-AVGPTMEVVTSRMRYI 1398
Query: 96 ---LKKSIQIFAMSATIGNINALSTFIEG-----ITYVENSRPTKHSEYVT-VDKRVFQS 146
L+K I+I + ++ N L +I + RP VT +D F++
Sbjct: 1399 SSQLEKPIRIVGLCTSLANARDLGEWIGASSHGLFNFAPGVRPVPLDIRVTGIDIVNFEA 1458
Query: 147 FDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSS----KIACSNLALRLQFD 202
+Y+ A+ G ++F + K+A +L D
Sbjct: 1459 RMQAMARPVYS-------------AICQHAPGGEPSIVFVPTRKHAKLASLDLLTFAAAD 1505
Query: 203 RFPGTKEYKKQEKEDLIEALKEENDGKLS-TNLEECILYGVAYHHADLTAGERRLIEEAY 261
P +++ + EDL + GK+S + + + +GVA H + + ER L+E +
Sbjct: 1506 GKP--QKFLACDPEDLAPHI-----GKISDSAVRHALGFGVALLHESMDSDERELVERVF 1558
Query: 262 LAGTLQIICCTSTLAAGVNLPAQ-RVIIRDSYVGRDFISLNMYK-----QMVGRAGRTGL 315
+G ++ T+ LA G+ + VI+ Y + Y M+GRA R
Sbjct: 1559 SSGAATVLVVTAPLAWGLTASCKLSVIMGTQYYDAGGAASADYPVTDLLAMMGRAARPLH 1618
Query: 316 QESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMD 350
+ ++LC + + P P+ SH+D
Sbjct: 1619 DDHSVCVLLCHAPRK--EYYKKFLYEPFPVESHLD 1651
>gi|389748536|gb|EIM89713.1| P-loop containing nucleoside triphosphate hydrolase protein
[Stereum hirsutum FP-91666 SS1]
Length = 1660
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 100/374 (26%), Positives = 177/374 (47%), Gaps = 52/374 (13%)
Query: 41 SIYICTIEKGSKLIGSLIQENRI-DEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKS 99
+I + T EK L S +I ++ L ++DE H+LNE RG LE V+S++ +
Sbjct: 331 TIIVTTCEKWDSLTRSWRDHGQILSQVQLCLVDEVHILNE-SRGSTLEVVISRMKARGSA 389
Query: 100 IQIFAMSATIGNINALSTFIEG---------ITYVENSRPTKHSEYVTVDKRVFQSFDGK 150
++ +SAT+ NI+ ++ +I G + E RP K + +V ++ + D +
Sbjct: 390 VRFVTVSATVPNIDDVARWIGGKDAIGPARVFQFGEEYRPCKLTRHVYGFQKSRNTNDFQ 449
Query: 151 SLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRLQFDRFPGTKEY 210
+A LD L +L +L+FC+++ A + KEY
Sbjct: 450 -----FAHTLDNRLF-----PILQRHSTQKPMLVFCATRKGVLTTAETI-------LKEY 492
Query: 211 KK--QEKEDLIEALKEENDGKLSTN-LEECILYGVAYHHADLTAGERRLIEEAYLAGTLQ 267
+K + K++L + + L + G+ HHA L +R+ E +L+ TL+
Sbjct: 493 EKAKESKQNLPWQVPRRIEQTFQDQRLAKLAQAGIGVHHAGLNIQDRKTTEGLFLSKTLR 552
Query: 268 IICCTSTLAAGVNLPAQRVIIR-----DSYVGRDFISLNMYKQMVGRAGRTGLQESGESI 322
++ TSTLA GVNLPA V+++ + V +++ L+M QM+GRAGR + G +I
Sbjct: 553 VVVATSTLAVGVNLPAHVVVVKGVKIFQNNVSQEYSDLDMM-QMIGRAGRPQFDKDGIAI 611
Query: 323 MLCKT-----MQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKTLI 377
++C++ D + S++ + S H++ L + I V +S E K+ I
Sbjct: 612 IMCESELEHKYTDLVAGKSILES-----SLHVN---LAEHINAEVGLGTITSAESAKSWI 663
Query: 378 KHTLFYQ--LKSPE 389
+ YQ LK+P+
Sbjct: 664 HSSFLYQRILKNPK 677
>gi|409046893|gb|EKM56372.1| hypothetical protein PHACADRAFT_253448 [Phanerochaete carnosa
HHB-10118-sp]
Length = 1973
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 108/381 (28%), Positives = 188/381 (49%), Gaps = 48/381 (12%)
Query: 33 TKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSK 92
TK+Q+ + I + T EK + + + + LI+IDE H+L++ +RGP+LE +V++
Sbjct: 399 TKQQIAETQIIVTTPEKWDVITRKSTDTSYTNLVRLIIIDEIHLLHD-ERGPVLESIVAR 457
Query: 93 VL----YLKKSIQIFAMSATIGNINALSTFI-----EGITYVENS-RPTK-HSEYVTV-D 140
+ + +++ +SAT+ N ++TF+ +G+ Y ++S RP ++V V +
Sbjct: 458 TVRRMEQTSEYVRLVGLSATLPNYEDVATFLRVDRDKGLFYFDSSYRPCPLQQQFVGVTE 517
Query: 141 KRVFQSFDGKSLTEI-YADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLA--L 197
K+ + + + + E+ Y LD + G L+F S+ + A +
Sbjct: 518 KKAIKRY--QVMNEVCYEKVLDQA--------------GKNQTLVFVHSRKETAKTAKFI 561
Query: 198 R-LQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRL 256
R + D+ T+ K + E L EE + NL++ + +G HHA ++ +R L
Sbjct: 562 RDMAIDKETITQFVKPEGATR--EILLEEVNNVKDPNLKDLLQFGFGIHHAGMSREDRGL 619
Query: 257 IEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYV-----GRDFISLNMYK--QMVGR 309
+EE + G LQ++ CT+TLA GVNLPA VII+ + + GR ++ L+ QM+GR
Sbjct: 620 VEELFADGHLQVLVCTATLAWGVNLPAHTVIIKGTQIYNPEKGR-WVELSPQDVLQMLGR 678
Query: 310 AGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAANLCSS 369
AGR GE I++ + + S+MN PI S +L E+V + +
Sbjct: 679 AGRPQYDTFGEGIIIT-NHSELQYYLSLMNQQ-LPIESQFVSKLADNLNAEIVLGTIRNR 736
Query: 370 LEDVKTLIKHTLFY--QLKSP 388
E V+ L +T Y LK P
Sbjct: 737 DEAVQWL-GYTYLYVRMLKDP 756
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 87/383 (22%), Positives = 165/383 (43%), Gaps = 41/383 (10%)
Query: 21 EEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEP 80
+E + G+ R L K + +CT + L Q + IGL++ DE +
Sbjct: 1227 KEIVSLTGESSQDLRLLEKGDLIVCTPAQWDILSRRWRQRKNVQTIGLLIADEVQQVGG- 1285
Query: 81 QRGPILECVVSKVLYLKKSI----QIFAMSATIGNINALSTFIEGITY-VENSRPTKHSE 135
+ GP E ++S+ Y+ +I A ++ N L ++ ++ + N P+
Sbjct: 1286 EVGPTYEVILSRTRYVSAQTDIKTRIVACGVSLANARDLGEWLGAPSHAIFNFPPSARPL 1345
Query: 136 YVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLM--VLIFCSSKIAC- 192
+ + QSF+ + + S P A L +V+ + V+IF S+ C
Sbjct: 1346 DMDIH---LQSFNLPHFPSLM-------IAMSKP-AYLAIVEHSSTKPVIIFVPSRRQCR 1394
Query: 193 ---SNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADL 249
+L D P K + E++DL L +D L E + +GV Y+H L
Sbjct: 1395 LTADDLITHCGADEDP--KRFLNVEEDDLQPHLNHLSD----QGLVETLKHGVGYYHEAL 1448
Query: 250 TAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS--YVGR-----DFISLNM 302
++R+++ + +G +Q++ + +A + + + VII Y G+ D+ +++
Sbjct: 1449 NKQDKRIVQRLFESGAIQVLIASRDIAWSLPVASYMVIIMSVQYYEGKEHRYVDYPVMDV 1508
Query: 303 YKQMVGRAGRTGLQESGESIMLC-KTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEV 361
QM+GRA R + +++C +T +DF + + G PI SH+ L D L
Sbjct: 1509 L-QMMGRACRPMEDDRSRCVLMCQQTRKDF--YKKFLAEG-LPIESHLPTHMLHDYFLSE 1564
Query: 362 VAANLCSSLEDVKTLIKHTLFYQ 384
+A + +D ++ T FY+
Sbjct: 1565 IAVKTIENKQDAMDILTWTYFYR 1587
>gi|401410116|ref|XP_003884506.1| RNA helicase-related protein required for pre-mRNA splicing, related
[Neospora caninum Liverpool]
gi|325118924|emb|CBZ54476.1| RNA helicase-related protein required for pre-mRNA splicing, related
[Neospora caninum Liverpool]
Length = 2230
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 107/413 (25%), Positives = 195/413 (47%), Gaps = 51/413 (12%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V E+ Q+ ++ + + + E + G T++Q+ + + + T EK + +
Sbjct: 619 LVAEQVQAFSQRLQPYGVTVRE---LTGDVNLTRQQIEETQVIVTTPEKWDIITRKAGER 675
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLY----LKKSIQIFAMSATIGNINALS 116
+ L++IDE H+L++ RGP+LE ++++ + ++ I++ +SAT+ N + ++
Sbjct: 676 AYTQLVRLVIIDEIHLLHD-SRGPVLEAIIARTIRQIETAQEHIRLVGLSATLPNYDDVA 734
Query: 117 -----TFIEGITYVENS-RPTKHSE-YVTV-DKRVFQSFDGKSLTEIYADNLDYSLTGSG 168
T +G+ + N RP + Y+ V DK+ + ++ ++ E+ + L +
Sbjct: 735 VCLRVTPEKGLFFFGNHYRPVPLKQTYIGVKDKKAIKRYN--TMNEVTYEKLMEN----- 787
Query: 169 PDAVLHLVQGNLMVLIFCSSKIACSNLA-----LRLQFDRFPGTKEYKKQEKEDLIEALK 223
G VLIF S+ A + LQ D P ++ +E L+
Sbjct: 788 --------AGKSQVLIFVHSRKETVKTARFIRDMALQKDTLPRFLQHMTASRE----ILQ 835
Query: 224 EENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPA 283
E + + +L+E + YG A HHA L +R+L+E+ + +Q++ T+TLA GVNLPA
Sbjct: 836 SEAEAVKTGDLKELLPYGFAVHHAGLPRTDRKLVEDLFADRHIQVLISTATLAWGVNLPA 895
Query: 284 QRVIIRDSYV----GRDFISLNMYK--QMVGRAGRTGLQESGESIMLCKTMQDFLRFSSM 337
VII+ + V + L+ QM+GRAGR SG +I++ T L++
Sbjct: 896 HTVIIKGTQVYLPEKGSWAELSPMDVLQMMGRAGRPQYDTSGHAILI--TQHSELQYYLS 953
Query: 338 MNAGPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFY--QLKSP 388
+N PI S M L D++ V S ED + +T Y LK+P
Sbjct: 954 LNNQQLPIESQMI-SCLPDMLNAEVVLGSVRSREDAVNWLGYTYLYVRMLKNP 1005
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 71/329 (21%), Positives = 137/329 (41%), Gaps = 45/329 (13%)
Query: 83 GPILECVVSKVLY----LKKSIQIFAMSATIGNINALSTFIEGITY--VENSRPT----- 131
G LE +S+ Y L++ I+I AM+ ++ N + ++ G++ + N P+
Sbjct: 1538 GSTLEICLSRTRYISAQLQRPIRIVAMANSLANAKDVGDWL-GVSSSGLFNFHPSVRTVP 1596
Query: 132 ------------KHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGN 179
+ + + + K V+Q+ ++Y N + +GS L
Sbjct: 1597 LEISLHGFDVYHREARLLAMSKAVYQA------VKLYTSNREDERSGSLSSRKLK----- 1645
Query: 180 LMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECIL 239
V++FCS + C A+ L K D E + + L E +
Sbjct: 1646 -NVIVFCSDRRHCRLTAIDLLLQAAADDDPKKFLHVSD--EVMSKYTSVVRDKMLNETLS 1702
Query: 240 YGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYV----GR 295
YGV H+ L+A E++L+++ + AG +Q++ A G+ + A V+I D+ G
Sbjct: 1703 YGVGLLHSGLSAAEQQLVQQLHAAGAIQVVVVAEECAWGLQMYAHLVVIVDTKKFTENGY 1762
Query: 296 DFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLV 355
+ ++ QM+G A R+ + + G +++ C + + F P P+ S ++ LV
Sbjct: 1763 EDYTVADVLQMLGHATRSSIDKHGYAVLFCPSSKR--EFYKKFIFEPLPVESQLE-QNLV 1819
Query: 356 DLILEVVAANLCSSLEDVKTLIKHTLFYQ 384
D I V + +D + T Y+
Sbjct: 1820 DHINAEVVLKTIENKQDAVDWLTWTFLYR 1848
>gi|261200078|ref|XP_002626440.1| DEAD/DEAH box DNA helicase [Ajellomyces dermatitidis SLH14081]
gi|239594648|gb|EEQ77229.1| DEAD/DEAH box DNA helicase [Ajellomyces dermatitidis SLH14081]
Length = 1313
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 98/360 (27%), Positives = 164/360 (45%), Gaps = 50/360 (13%)
Query: 35 RQLNKKSIYICTIEKGSKLIGSLIQENRIDE-IGLIVIDEFHMLNEPQRGPILECVVSKV 93
R + +I I T EK + ++ + + L +IDE H+L E RG LE VVS++
Sbjct: 211 RNVQNANIVITTPEKWDSMTRKWKDHIKLMQLVKLFLIDEVHILKE-TRGATLEAVVSRM 269
Query: 94 LYLKKSIQIFAMSATIGNINALSTFIEGITYVENSRPTKHSEYVTVDKRVFQSFDGKSLT 153
+ +++ A+SAT+ N + ++ G P H E R + F L
Sbjct: 270 KSVDSNVRFVALSATVPNSEDIGAWL-GKDPTSQHLPA-HCE------RFGEEFRPVKLQ 321
Query: 154 EIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFC---SSKIACSNLALRLQFDRFPGTKEY 210
++ P+ V+ ++IFC +S IA S +L P + +
Sbjct: 322 KL-------------PE-VMEKHSKKKPIMIFCCTRNSAIATSKYLGKLWTSTNPPRRLW 367
Query: 211 KKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIIC 270
K +++ + L I GVA+HHA L A +R +E +L+G + +IC
Sbjct: 368 SGPTKPVVVQ----------NPELRATISTGVAFHHAGLDASDRHAVESGFLSGQINVIC 417
Query: 271 CTSTLAAGVNLPAQRVIIRDSYVGRD-----FISLNMYKQMVGRAGRTGLQESGESIMLC 325
CTSTLA GVNLP VII+++ +D + L M QM+GRAGR +S +++L
Sbjct: 418 CTSTLAVGVNLPCHLVIIKNTVSWQDNCCKEYPDLEMM-QMLGRAGRPQFDDSAVAVIL- 475
Query: 326 KTMQDFLRFSSMMNAGPEPISS--HMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFY 383
T ++ + + AG EP+ S H++ L+D + + + +E + T F+
Sbjct: 476 -TRKERVNHYEKLVAGTEPLESCLHLN---LIDHLNAEIGLGTVTGVESAVRWLTGTFFF 531
>gi|448720979|ref|ZP_21703568.1| DEAD/DEAH box helicase, partial [Halobiforma nitratireducens JCM
10879]
gi|445780255|gb|EMA31151.1| DEAD/DEAH box helicase, partial [Halobiforma nitratireducens JCM
10879]
Length = 494
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 98/345 (28%), Positives = 164/345 (47%), Gaps = 56/345 (16%)
Query: 63 IDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINALSTFIEG- 121
+ ++ + VIDE H+L+ +RG +LE +S++ L ++ A+SAT+ N++ ++ +++
Sbjct: 134 VTDVDVCVIDEVHLLDADRRGSVLEVTISRLRRLCDP-RVVALSATMPNVDDVAAWLDAP 192
Query: 122 ----ITYVENSRPTK---------HSEYVTVDK--RVFQSFDGKSLTEIYADNLDYSLTG 166
+ E RP H E DK R++++ D L E +
Sbjct: 193 AETTFEFGEGYRPVDLNAGVRTYTHGENSFADKYRRLYRALD---LAEPH---------- 239
Query: 167 SGPDAVLHLVQGNLMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKE-- 224
++ + L+F SS+ A + + + + D LKE
Sbjct: 240 ---------LREDGQALVFVSSRQDTVRAAEAARDEIAERDVPMGVRGEYDFHTDLKETI 290
Query: 225 ENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQ 284
END L + IL GVA+HHA L+ ER L+EE + G ++++ TSTLA GVNLPA+
Sbjct: 291 END-----TLRKSILDGVAFHHAGLSKDERDLVEEWFKEGHIELLFSTSTLAWGVNLPAR 345
Query: 285 RVIIRDSYVGR------DFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMM 338
V+IRD+ + D L++ QM+GRAGR G + G ++C D ++ ++
Sbjct: 346 CVVIRDTKLHDPLEGEVDMSPLDVL-QMLGRAGRPGYDDVGYGWVVCDAA-DADKYRRLL 403
Query: 339 NAGPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFY 383
N G E I S + L E +A + LEDV ++ T +Y
Sbjct: 404 NEGKE-IESRLAESLETHLNAE-IAMGTITDLEDVMDWLETTFYY 446
>gi|296415352|ref|XP_002837354.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295633218|emb|CAZ81545.1| unnamed protein product [Tuber melanosporum]
Length = 1535
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 97/376 (25%), Positives = 174/376 (46%), Gaps = 61/376 (16%)
Query: 35 RQLNKKSIYICTIEKGSKLIGSLIQENRIDE-IGLIVIDEFHMLNEPQRGPILECVVSKV 93
R + I + T EK + ++ E + L +IDE H+L E RG LE VVS++
Sbjct: 331 RNVKDGDIIVTTPEKWDSMTRRWEDHRKLLEMVRLFLIDEVHILKE-DRGATLEVVVSRM 389
Query: 94 LYLKKSIQIFAMSATIGNINALSTFIEGITYVENS-----------RPTKHSEYVTVDKR 142
+ ++ A+SAT+ N ++ ++ + V S RP K ++V +
Sbjct: 390 KSIGSDVRFIALSATVPNSADIAEWLGKCSSVSQSPAHDQRFGEEFRPVKLQKFVYGYQS 449
Query: 143 VFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRL--- 199
F ++ LD +L P+ + G +++FC ++ C + A L
Sbjct: 450 PGNDF-------VFDKKLDRAL----PEVIRKHSAGK-PIMVFCMTRAMCISTAKVLAQC 497
Query: 200 -----QFDR-FPG-TKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAG 252
DR +P T ++ ++K +L + GVA+HHA L
Sbjct: 498 CSTVKPADRMWPAPTIQFSFKDK-----------------DLHATGVCGVAFHHAGLDQN 540
Query: 253 ERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVG-----RDFISLNMYKQMV 307
+R L+E+ +L G L +ICCTSTLA GVNLP V+I+++ ++++ L + QM+
Sbjct: 541 DRALVEKLFLEGHLSVICCTSTLAVGVNLPTHLVVIKNTVTWSNGGPKEYVDLEVM-QML 599
Query: 308 GRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAANLC 367
GRAGR ++G ++++ + + +R+ M+ +G E + S + LV+ I +
Sbjct: 600 GRAGRPQFDDTGAAVLMTR-REHRVRYEKMV-SGTETVESCLH-ENLVEHINAEIGLGTI 656
Query: 368 SSLEDVKTLIKHTLFY 383
++ E K ++ T Y
Sbjct: 657 TNAESAKRWLRSTFLY 672
>gi|345569401|gb|EGX52267.1| hypothetical protein AOL_s00043g56 [Arthrobotrys oligospora ATCC
24927]
Length = 1977
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 102/379 (26%), Positives = 176/379 (46%), Gaps = 46/379 (12%)
Query: 33 TKRQLNKKSIYICTIEKGSKLIGSLIQENR-IDEIGLIVIDEFHMLNEPQRGPILECVVS 91
TK ++ + I + T EK + +N + ++ L++IDE HML++ +RGP++E +V+
Sbjct: 388 TKAEILRTQIIVTTPEKWDVVTRKSTGDNELVQKVRLLIIDEVHMLHD-ERGPVIETLVA 446
Query: 92 K----VLYLKKSIQIFAMSATIGNINALSTFIE-----GITYVENS-RPTKHSEYVTVDK 141
+ V + I+I +SAT+ N +STF++ G+ Y + S RP ++
Sbjct: 447 RTQRQVEATQSMIRIVGLSATLPNYVDVSTFLKVNPLHGLFYFDQSFRPVPLEQH----- 501
Query: 142 RVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSK---IACSNLALR 198
F GK + +NLD + V +++ V++F S+ + + L
Sbjct: 502 --FIGVKGKPGSRTSNENLDRIAW----EKVKEMLELGHQVMVFVHSRKDTVKTARLLYE 555
Query: 199 LQFDR-----FPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGE 253
+ D F T+ K + LK++ D L+E G+ HHA + +
Sbjct: 556 MAMDEQRTDLFDNTEHPK-------YDILKKDVDKAKGRELKELFKKGLGVHHAGMLRSD 608
Query: 254 RRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYV------GRDFISLNMYKQMV 307
R L+E + G +++CCT+TLA GVNLPA V+I+ + V G + + Q+
Sbjct: 609 RNLMERLFSEGVAKVLCCTATLAWGVNLPAAAVVIKGTQVYSPQKGGHVDLGILDVLQIF 668
Query: 308 GRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAANLC 367
GRAGR ++ G I +C T + S + +PI S + +L EV +
Sbjct: 669 GRAGRPQFEKYGIGI-ICTTHDKLAHYLSAITQ-QQPIESRFTEKLVDNLNAEVSLGTVT 726
Query: 368 SSLEDVKTLIKHTLFYQLK 386
S E V+ L LF ++K
Sbjct: 727 SVDEGVQWLGYTYLFVRMK 745
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 121/455 (26%), Positives = 189/455 (41%), Gaps = 73/455 (16%)
Query: 28 GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILE 87
G P R + I I T EK + S + + ++ L++IDE H+L RGPILE
Sbjct: 1227 GDNTPDTRSIRNADIIITTPEKWDGISRSWQTRDYVRKVSLVIIDEIHLLGS-DRGPILE 1285
Query: 88 CVVSKVLYL----KKSIQIFAMSATIGNI----NALSTFIEGITYVENS-RPTKHSEYVT 138
+VS++ Y+ +++ MS N N L EG+ +S RP Y+
Sbjct: 1286 IIVSRMNYIASQTSNPVRLMGMSTACANAADVGNWLGVREEGLFNFRHSVRPVPLEVYID 1345
Query: 139 --VDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSK----IAC 192
+K+ F + +S T V+IF +S+ +
Sbjct: 1346 GFAEKQGFCPLMASMNRPAFLAIKSHSPTKP--------------VIIFVASRRQTRLTA 1391
Query: 193 SNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAG 252
+L + P + + +E LI L G T L+E + +G+ HHA L
Sbjct: 1392 KDLIAFCGLEDNP--RRFLNVSEEGLISILS----GVRDTPLKEALAFGIGLHHAGLVES 1445
Query: 253 ERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGRDFISLNM--YK------ 304
+R L EE +L +QI+ TSTLA GVNLPA VI++ G F YK
Sbjct: 1446 DRLLAEELFLTNKIQILVATSTLAWGVNLPAHLVIVK----GTQFFDAKTEAYKDMDLTD 1501
Query: 305 --QMVGRAGRTGLQESG-ESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEV 361
QM+GRAGR SG I + + F ++ ++ G P+ S + L D +
Sbjct: 1502 VLQMLGRAGRPQFDTSGIARIFTQEAKKAFYKY--FLHTG-FPVESSLH-KVLDDHLGAE 1557
Query: 362 VAANLCSSLEDVKTLIKHTLFYQL--KSP---------EDQQTF-LETTLSEIVASLLAS 409
V+A S +D + T F++ K+P EDQQ+ + +E + L+ +
Sbjct: 1558 VSAGTIKSKQDSLDYLTWTFFFRRLHKNPNYYGLEIAAEDQQSISAQEEANEFLVGLVDN 1617
Query: 410 ------KGTMLTMNEAGHLSLTSIAKAAVQAGLSH 438
K L + G L T++ K + LSH
Sbjct: 1618 SVNELQKSGCLVSHPTGRLESTALGKISSYYYLSH 1652
>gi|159130360|gb|EDP55473.1| DEAD/DEAH box DNA helicase (Mer3), putative [Aspergillus fumigatus
A1163]
Length = 1439
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 96/341 (28%), Positives = 160/341 (46%), Gaps = 34/341 (9%)
Query: 6 YQSLAKA--AEEFKFYLEEY-------AGVKGQYPPTK-RQLNKKSIYICTIEKGSKLIG 55
YQ+ K+ +E F+ + ++ A + G T+ R + I + T EK +
Sbjct: 285 YQAPTKSLCSERFRDWSRKFMSLGLQCAELTGDTDHTQLRSVQNSQIIVTTPEKWDSMTR 344
Query: 56 SLIQENRIDE-IGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQIFAMSATIGNINA 114
R+ + + L +IDE H+L E RG LE VVS++ +++ A+SAT+ N
Sbjct: 345 KWKDHARLMQLVKLFLIDEVHILKE-ARGATLEAVVSRMKTFGSNVRFVALSATVPNSED 403
Query: 115 LSTFIEGITYVENSRPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYS-LTGSGPDAVL 173
++ ++ G + P H E+ D R + + Y+++ + L GS VL
Sbjct: 404 IACWL-GKDAMNQHVPA-HREHFGEDFRPVKLQKFVYGYQSYSNDFAFDKLCGSKLPDVL 461
Query: 174 HLVQGNLMVLIFCSSKIACSNLA---LRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKL 230
++IFC ++ +C A RL P + +K K L+ N
Sbjct: 462 GTHSCRKPIMIFCCTRNSCVATAKELARLWSMTNPPARLWKASGKH-----LEAHN---- 512
Query: 231 STNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRD 290
+L ++ GVA+HHA L +R +E YL G + +ICCTSTLA GVNLP VII+
Sbjct: 513 -ADLRTTLMAGVAFHHAGLDPADRHTVESGYLQGHIAVICCTSTLAVGVNLPCYLVIIKG 571
Query: 291 SYVGRD-----FISLNMYKQMVGRAGRTGLQESGESIMLCK 326
+ +D + L M +M+GRAGR +S ++++ +
Sbjct: 572 TVGWQDGGCKEYSDLEMM-EMLGRAGRPQFDDSAIAVIMTR 611
>gi|406863404|gb|EKD16451.1| Sec63 Brl domain-containing protein [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 1964
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 103/375 (27%), Positives = 179/375 (47%), Gaps = 38/375 (10%)
Query: 33 TKRQLNKKSIYICTIEKGSKLIGSLIQENR-IDEIGLIVIDEFHMLNEPQRGPILECVVS 91
TK ++ I + T EK + + + ++ L++IDE HML++ RG +LE +V+
Sbjct: 361 TKSEIVATQIIVTTPEKWDVVTRKGTGDTELVQKVRLLIIDEVHMLHD-DRGAVLESLVA 419
Query: 92 K----VLYLKKSIQIFAMSATIGNINALSTFIE-----GITYVENS-RPTKHSEYVTVDK 141
+ V + I+I +SAT+ N ++ F++ G+ Y + S RP ++
Sbjct: 420 RTERQVESTQSLIRIVGLSATLPNYVDVADFLKVNRHAGLFYFDASFRPVPLEQH----- 474
Query: 142 RVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRLQF 201
F GK+ T DN+D + + V +++ + +++F S+ SN A ++ +
Sbjct: 475 --FIGVRGKAGTRTSRDNIDTTTF----EKVQDMLEQDHQIMVFVHSRKDTSNTA-KMLY 527
Query: 202 DRF---PGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIE 258
++ + Q A+KE + + E + G+ HHA + +R L+E
Sbjct: 528 EKAIDQACAHLFDPQGHPGYPAAVKEAARSR-GREIRELLPKGIGIHHAGMARSDRNLME 586
Query: 259 EAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYV-----GRDFISLNMYK--QMVGRAG 311
+ + G L+++CCT+TLA GVNLPA VII+ + V G+ FI L + Q+ GRAG
Sbjct: 587 KLFSNGVLKVLCCTATLAWGVNLPAAAVIIKGTQVYSAQEGK-FIDLGILDVLQIFGRAG 645
Query: 312 RTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAANLCSSLE 371
R Q++G M+C T QD L PI S + +L E+ + S E
Sbjct: 646 RPQFQDTGIG-MIC-TTQDKLAHYLQAVTSQVPIESRFSKHMVDNLNAEIALGTVTSVPE 703
Query: 372 DVKTLIKHTLFYQLK 386
V+ L LF +++
Sbjct: 704 AVQWLGYSYLFVRMQ 718
Score = 99.4 bits (246), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 85/316 (26%), Positives = 138/316 (43%), Gaps = 49/316 (15%)
Query: 28 GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILE 87
G P R + I I T EK + S + ++ L++IDE H+L RGPILE
Sbjct: 1199 GDNTPDTRTIRDADIIITTPEKWDGISRSWQTRGYVRQVSLVIIDEIHLLGG-DRGPILE 1257
Query: 88 CVVSKVLYL----KKSIQIFAMSATIGNINALSTFI---EGITYVENS-RPTKHSEYVTV 139
+VS++ Y+ K S+++ MS N + L ++ EG+ +S RP ++
Sbjct: 1258 IIVSRMNYIAAQSKDSVRLMGMSTACANASDLGNWLGVKEGLFNFRHSVRPVPLEIFIDG 1317
Query: 140 DKRV------FQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSK---- 189
V QS + + I + D V++F +S+
Sbjct: 1318 FPEVRGFCPLMQSMNRPTFLAIKTHSPDKP------------------VIVFVASRRQTR 1359
Query: 190 IACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADL 249
+ +L + P + + K +++L + L D L +E + +G+ HHA L
Sbjct: 1360 LTAKDLINYCGMEDNP--RRFVKMSEDELQQNLTRVKDDAL----KEALSFGIGLHHAGL 1413
Query: 250 TAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYV------GRDFISLNMY 303
T +R L EE + +QI+ T+TLA GVNLPA V+++ + G + L
Sbjct: 1414 TESDRSLAEELFANNKIQILVATATLAWGVNLPAHLVVVKGTQFFDAKTEGYKDMDLTDV 1473
Query: 304 KQMVGRAGRTGLQESG 319
QM+GRAGR SG
Sbjct: 1474 LQMLGRAGRPQFDTSG 1489
>gi|357451431|ref|XP_003595992.1| U5 small nuclear ribonucleoprotein 200 kDa helicase [Medicago
truncatula]
gi|355485040|gb|AES66243.1| U5 small nuclear ribonucleoprotein 200 kDa helicase [Medicago
truncatula]
Length = 2223
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 99/347 (28%), Positives = 169/347 (48%), Gaps = 44/347 (12%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V E +L+ +++ + E +G + T++Q+ + I + T EK +
Sbjct: 591 LVAEVVGNLSNRLQDYNVTVRELSGDQSL---TRQQIEETQIIVTTPEKWDIITRKSGDR 647
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYL----KKSIQIFAMSATIGNINALS 116
+ L++IDE H+L++ RGP+LE +V++ + K I++ +SAT+ N ++
Sbjct: 648 TYTQLVKLVIIDEIHLLHD-NRGPVLESIVARTVRQIETSKDYIRLVGLSATLPNYEDVA 706
Query: 117 TFI-----EGITYVENS-RPTKHSE-YVTVD-KRVFQSFDGKSLTEI-YADNLDYSLTGS 167
F+ +G+ Y +NS RP S+ Y+ + K+ Q F + + +I Y LD
Sbjct: 707 LFLRVDLNKGLFYFDNSYRPVPLSQQYIGITIKKPLQRF--QLMNDICYRKVLD------ 758
Query: 168 GPDAVLHLVQGNLMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLI--EALKEE 225
V G VLIF S+ + A ++ D + KED E L
Sbjct: 759 --------VAGKHQVLIFVHSRKETAKTARAIR-DAALADDTLGRFLKEDSASREILHTH 809
Query: 226 NDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQR 285
D S++L++ + YG A HHA +T +R+L+E+ + G Q++ T+TLA GVNLPA
Sbjct: 810 TDLVKSSDLKDLLPYGFAIHHAGMTRTDRQLVEDLFADGHAQVLVSTATLAWGVNLPAHT 869
Query: 286 VIIRDSYV-------GRDFISLNMYKQMVGRAGRTGLQESGESIMLC 325
VII+ + + + L++ QM+GRAGR GE I+L
Sbjct: 870 VIIKGTQIYNPEKGAWTELSPLDVM-QMLGRAGRPQYDSYGEGIILT 915
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 78/341 (22%), Positives = 149/341 (43%), Gaps = 42/341 (12%)
Query: 10 AKAAEEFKFYLEEYAG--------VKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQEN 61
A A E ++ + +++ G + G+ + L K + I T EK L Q
Sbjct: 1466 ALAKERYRDWEKKFGGGLKLKVVELTGETATDLKLLEKGQVIISTPEKWDALSRRWKQRK 1525
Query: 62 RIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLY----LKKSIQIFAMSATIGNINALST 117
+ ++ L +IDE H++ Q GP+LE +VS++ Y L+ I+I A+S ++ N L
Sbjct: 1526 HVQQVSLFIIDELHLIGG-QGGPVLEVIVSRMRYISSQLENKIRIVALSTSLANAKDLGE 1584
Query: 118 FIEGIT-----YVENSRPTKHSEYVT-VDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDA 171
+I + + RP ++ VD F++ +++T+ ++ P
Sbjct: 1585 WIGATSHGLFNFPPGVRPVPLEIHIQGVDIANFEA-RMQAMTKPTYTSIAQHAKNKKP-- 1641
Query: 172 VLHLVQGNLMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLS 231
+V + + + + L G K + + E+L + + +D L
Sbjct: 1642 --------AIVFVPTRKHVRLTAVDLITYSGADSGEKPFLLRSLEELEPFINKISDEMLK 1693
Query: 232 TNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDS 291
L E GV Y H L + + ++ + + AG +Q+ +S++ GV L A V++ +
Sbjct: 1694 VTLRE----GVGYLHEGLNSLDHDIVAQLFEAGWIQVCVLSSSMCWGVTLSAHLVVVMGT 1749
Query: 292 --YVGR-----DFISLNMYKQMVGRAGRTGLQESGESIMLC 325
Y GR D+ ++ QM+G A R + SG+ ++LC
Sbjct: 1750 QYYDGRENAQTDYPVTDLL-QMMGHASRPLVDNSGKCVILC 1789
>gi|449459768|ref|XP_004147618.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
[Cucumis sativus]
Length = 2175
Score = 109 bits (273), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 126/462 (27%), Positives = 213/462 (46%), Gaps = 68/462 (14%)
Query: 20 LEEYAGVK-----GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEF 74
L++Y GVK G T++Q+++ I + T EK + + L++IDE
Sbjct: 588 LQDY-GVKVRELSGDQTLTRQQIDETQIIVTTPEKWDIITRKSGDRTYTQLVKLLIIDEI 646
Query: 75 HMLNEPQRGPILECVVSKVLY----LKKSIQIFAMSATIGNINALSTFI-----EGITYV 125
H+L++ RGP+LE +V++ + K+ I++ +SAT+ N ++ F+ +G+ +
Sbjct: 647 HLLHD-NRGPVLESIVARTVRQIETTKEHIRLVGLSATLPNYEDVALFLRVDPKKGLFHF 705
Query: 126 ENS-RPTK-HSEYVTVD-KRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMV 182
+NS RP + +Y+ + K+ Q F ++L Y S G V
Sbjct: 706 DNSYRPVALYQQYIGITVKKPLQRFQ-------LMNDLCYEKVMS--------FAGKHQV 750
Query: 183 LIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLI--EALKEENDGKLSTNLEECILY 240
LIF S+ S A ++ D + KED E L D S L++ + Y
Sbjct: 751 LIFVHSRKETSKTARAIR-DAALANDTLSRFLKEDSASREILHTHTDLVKSNELKDLLPY 809
Query: 241 GVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYV------- 293
G A HHA +T +R+L+E+ + G +Q++ T+TLA GVNLPA VII+ + +
Sbjct: 810 GFAIHHAGMTRVDRQLVEDLFADGHIQVLVSTATLAWGVNLPAHCVIIKGTQIYNPEKGA 869
Query: 294 GRDFISLNMYKQMVGRAGRTGLQESGESIMLC--KTMQDFLRFSSMMNAGPEPISSHMDP 351
+ L++ QM+GRAGR G I++ +Q +L S+MN PI S
Sbjct: 870 WTELSPLDVM-QMLGRAGRPQFDSEGTGIIITGHSELQYYL---SLMNQQ-LPIESQFVS 924
Query: 352 PTLVDLILEVVAANLCSSLEDVKTLIKHTLFY--QLKSP------EDQQTFLETTLSEIV 403
L E+V + ++ E + +T Y L++P D T + TL E
Sbjct: 925 KLADQLNAEIVLGTVQNARE-ASNWLGYTYLYVRMLRNPTLYGLAADAPT-RDITLEERR 982
Query: 404 ASLLASKGTMLTMN-------EAGHLSLTSIAKAAVQAGLSH 438
A L+ S T+L N ++G+ +T + + A ++H
Sbjct: 983 ADLIHSAATILDKNNLVKYDRKSGYFQVTDLGRIASYYYITH 1024
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 85/365 (23%), Positives = 158/365 (43%), Gaps = 36/365 (9%)
Query: 37 LNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYL 96
L + I I T EK L Q + ++ L +IDE H++ Q GP+LE +VS++ Y+
Sbjct: 1449 LERGQIIISTPEKWDALSRRWKQRKYVQQVSLFIIDELHLIGG-QGGPVLEVIVSRMRYI 1507
Query: 97 ----KKSIQIFAMSATIGNINALSTFIEGIT-----YVENSRPTKHSEYVT-VDKRVFQS 146
+ I+I A+S ++ N + +I + + RP ++ VD F++
Sbjct: 1508 ASQIENKIRIVALSTSLANAKDIGDWIGATSHGLFNFPPGVRPVPLEIHIQGVDIANFEA 1567
Query: 147 FDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRLQFDRFPG 206
Y + ++ G P V + ++ + + ++ +L F
Sbjct: 1568 RMQAMTKPTYTAIVQHAKNGK-PAIVFVPTRKHVRLTAVDIMTYSSADNGEKLPF----- 1621
Query: 207 TKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTL 266
+ ED+ + + ND L L +GV Y H L++ ++ ++ + + AG +
Sbjct: 1622 ----LLRSLEDIEPFVDKINDEMLKAILR----HGVGYLHEGLSSLDQEVVTQLFEAGWI 1673
Query: 267 QIICCTSTLAAGVNLPAQRVIIRDS--YVGR-----DFISLNMYKQMVGRAGRTGLQESG 319
Q+ +S++ GV L A V++ + Y GR D+ ++ QM+G A R L SG
Sbjct: 1674 QVCVISSSMCWGVPLSAHLVVVMGTQYYDGRENAHTDYPVTDLM-QMMGHASRPLLDNSG 1732
Query: 320 ESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKTLIKH 379
+ ++LC + + A P+ SH+ L D I + A + + +D I
Sbjct: 1733 KCVILCHAPRKEYYKKFLYEAF--PVESHLH-HFLHDNINAEIVAGIIENKQDAVDYITW 1789
Query: 380 TLFYQ 384
TL Y+
Sbjct: 1790 TLMYR 1794
>gi|213405467|ref|XP_002173505.1| pre-mRNA-splicing factor brr2 [Schizosaccharomyces japonicus
yFS275]
gi|212001552|gb|EEB07212.1| pre-mRNA-splicing factor brr2 [Schizosaccharomyces japonicus
yFS275]
Length = 2167
Score = 109 bits (273), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 107/384 (27%), Positives = 185/384 (48%), Gaps = 54/384 (14%)
Query: 33 TKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSK 92
TK+Q++ I + T EK + + + + L++IDE H+L++ +RGP+LE +VS+
Sbjct: 606 TKQQISSTQIIVTTPEKWDIITRKSNDLSYTNLVRLVIIDEIHLLHD-ERGPVLESIVSR 664
Query: 93 VLYLKKS----IQIFAMSATIGNINALSTFIE-----GITYVENS-RPTK-HSEYVTV-D 140
++ ++ +++ +SAT+ N ++ F+ G+ Y ++S RP E++ V +
Sbjct: 665 IIRHEEESLERVRLVGLSATLPNYVDVAAFLRVQLKNGLFYFDSSYRPCPLQQEFIGVTE 724
Query: 141 KRVFQSFDGKSLTEI-YADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRL 199
K+ + + L E Y ++++ G VLIF S+ + A
Sbjct: 725 KKPIKRL--QVLNEACYEKVMEHA--------------GKNQVLIFVHSRKETAKTA--- 765
Query: 200 QFDRFPGTKEYKKQEKEDLI-------EALKEENDGKLSTNLEECILYGVAYHHADLTAG 252
RF K +++ L+ E L+ E D + +L++ + YG A HHA +
Sbjct: 766 ---RFIRDKALEEETIGHLLRSDAASREILRAEADTTKNEDLKDLLPYGFAIHHAGMRRE 822
Query: 253 ERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYV-----GR-DFISLNMYKQM 306
+RR E+ + GT+Q++ T+TLA GVNLPA VII+ + V GR +S QM
Sbjct: 823 DRRSAEDLFADGTVQVLVSTATLAWGVNLPAHTVIIKGTQVYSPEKGRWAELSPQDVLQM 882
Query: 307 VGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAANL 366
+GRAGR GE I++ T + + S+MN S +M L D + +A
Sbjct: 883 LGRAGRPQFDSYGEGIIIT-THSELQYYLSLMNQQLPIESQYMS--KLPDNLNAEIATGT 939
Query: 367 CSSLEDVKTLIKHTLFY--QLKSP 388
S+ D + +T Y L+SP
Sbjct: 940 IQSIADAVRWLGYTYLYIRMLRSP 963
>gi|50293751|ref|XP_449287.1| hypothetical protein [Candida glabrata CBS 138]
gi|49528600|emb|CAG62261.1| unnamed protein product [Candida glabrata]
Length = 2140
Score = 109 bits (273), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 116/422 (27%), Positives = 197/422 (46%), Gaps = 47/422 (11%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V E+ + + F + E + G T+ ++ K + + T EK L +
Sbjct: 555 LVQEQVREFERRLSNFGIKVSE---LTGDTTLTRSEIEKFQVLVTTPEKWDVLTRKNDEN 611
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKV---LYLKKSIQIFAMSATIGNINALST 117
+ + ++ L++IDE H+LN+ QRGP+LE ++ + L+ + +I A+SAT+ N ++
Sbjct: 612 DIMLKLKLLIIDEIHLLND-QRGPVLESLIMRAKENCRLRSNPRIIALSATLPNYEQVAK 670
Query: 118 FI----EGITYVENS-RPTKHSEYVTVDKRVFQSFDG-KSLTEI----YADNLDYSLTGS 167
F+ E I Y +NS RP S Q F G KS + + + + +
Sbjct: 671 FLQVPEESIYYFDNSYRPCPLS----------QVFCGVKSTNSVKKLSFVNEVCF----- 715
Query: 168 GPDAVLHLVQGNLMVLIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEEND 227
+ V V+ V+IF S+ + A + D+F ++ +E+ LK E +
Sbjct: 716 --EKVCDAVKDGHQVIIFVHSRKETTRTA-KFIADKFSSLEKNILFFEENSRSILKSEGE 772
Query: 228 GKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVI 287
+L+ + G+ HHA L +R L E+ + G L+++ T+TLA GVNLPA VI
Sbjct: 773 NSKDIDLKTLLPQGIGIHHAGLARDDRSLSEDLFADGVLRVLVSTATLAWGVNLPAHTVI 832
Query: 288 IR--DSY---VGRDFISLNMYK--QMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNA 340
I+ D Y VG ++I L+ QM+GRAGR SGE I++ D + ++N
Sbjct: 833 IKGTDIYSPEVG-NWIRLSPQDLLQMLGRAGRPRYDTSGEGIIIT-NQTDIQYYLGILNQ 890
Query: 341 GPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQLKSPEDQQTFLETTLS 400
PI S VD + ++ + + D K IK + +Y ++ D T+L
Sbjct: 891 Q-LPIESQF-LSKFVDNLNAEISLGMVKTKLDAKRWIKDSYYY-VRLCYDPSTYLPENFK 947
Query: 401 EI 402
EI
Sbjct: 948 EI 949
>gi|66826277|ref|XP_646493.1| DEAD/DEAH box helicase [Dictyostelium discoideum AX4]
gi|74997404|sp|Q55CI8.1|HELCL_DICDI RecName: Full=Activating signal cointegrator 1 complex subunit
3-like
gi|60474434|gb|EAL72371.1| DEAD/DEAH box helicase [Dictyostelium discoideum AX4]
Length = 2237
Score = 109 bits (273), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 94/360 (26%), Positives = 168/360 (46%), Gaps = 57/360 (15%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V E + +K + + + E G + T +Q+++ I + T EK +
Sbjct: 619 LVQEMVGNFSKRLKSYGIVVNELTGDQSL---TNKQISETQIIVTTPEKWDIITRKSGDR 675
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKSIQ----IFAMSATIGNINALS 116
+ LI+IDE H+L++ +RGP+LEC+V++ L + +S Q + +SAT+ N ++
Sbjct: 676 AYTQLVKLIIIDEIHLLHD-ERGPVLECIVARTLRMIESTQQMVRLVGLSATLPNYEDVA 734
Query: 117 TFI----EGITYVENS-RPTK-HSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPD 170
TF+ +G+ Y ++S RP +Y+ + R + + D + T
Sbjct: 735 TFLRVEPDGVFYFDSSYRPIPLEQQYIGISDRGIKQLQRCN---------DITFTKVSER 785
Query: 171 AVLHLVQGNLMVLIFCSSKIACSNLALRLQ--------FDRF---PGTKEYKKQEKEDLI 219
G+ +LIF S+ + L+ DR+ P ++E + I
Sbjct: 786 V------GDHQILIFVHSRRETAKTGKDLRDRAVEDQSIDRYIRDPASREILRATASKQI 839
Query: 220 EALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGV 279
+ + L++ + YG+ HHA L+ +R L+E+ + +Q++ T+TLA GV
Sbjct: 840 Q----------NAELKDLLPYGIGIHHAGLSRSDRSLVEDLFGDNRIQVLISTATLAWGV 889
Query: 280 NLPAQRVIIRDSYV-----GRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRF 334
NLPA VII+ + + G +S QM+GRAGR + GE I++ T Q L+F
Sbjct: 890 NLPAHTVIIKGTQIYNPEKGWCELSPLDVTQMLGRAGRPPFDKEGEGIII--TSQHELQF 947
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 88/343 (25%), Positives = 155/343 (45%), Gaps = 54/343 (15%)
Query: 37 LNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYL 96
L++ +I + EK L Q + I L+++DE H++ + GP +E VVS++ Y+
Sbjct: 1491 LDRSNIIVTNCEKWDILSRKWKQRKALQSINLLIVDELHLIGG-EYGPTMEIVVSRMRYI 1549
Query: 97 K----KSIQIFAMSATIGNINALSTFIEGIT------YVENSRPTKHSEYVTVDKRVFQS 146
++++ A+S++I N L +I G T + N RP EY + F
Sbjct: 1550 STQTGNALRVIALSSSIANARDLVLWI-GATPQTCYNFHPNVRPIP-VEY-QIQGFEFPH 1606
Query: 147 FDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRL--QFDRF 204
F+ + L + P N ++F ++ +LA + F
Sbjct: 1607 FNARMLA------------MTKPTVYEVAKNKNQQSIVFVPTRKLSRSLAADIIANVSSF 1654
Query: 205 PGT--KEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYL 262
T K Y E+ L L++ + S L++ + GVA++H LT ERR++E +
Sbjct: 1655 EDTLTKPYLVCEEHVLTPYLEDVD----SFALKQSLQMGVAFYHDGLTERERRVVEILFR 1710
Query: 263 AGTLQIICCTSTLAAGV-NLPAQRVIIRDS--YVGRDF----ISLNMYKQMVGRAGRTGL 315
+G+++++ T ++A + N+ AQ V+I + Y G+D +N QM+GRAG+
Sbjct: 1711 SGSIRVLIATHSVAWLLDNVFAQLVVIMGTQLYQGKDIRYIDYPINDILQMIGRAGK--- 1767
Query: 316 QESGESI--------MLCKTMQDFLRFSSMMNAGPEPISSHMD 350
QE G I +LC + + M P P+ SH+D
Sbjct: 1768 QEGGGVISNKVAKVLLLCHAPKK--EYYKMFLNEPLPVESHLD 1808
>gi|449517355|ref|XP_004165711.1| PREDICTED: LOW QUALITY PROTEIN: U5 small nuclear ribonucleoprotein
200 kDa helicase-like [Cucumis sativus]
Length = 2175
Score = 109 bits (273), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 126/462 (27%), Positives = 213/462 (46%), Gaps = 68/462 (14%)
Query: 20 LEEYAGVK-----GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEF 74
L++Y GVK G T++Q+++ I + T EK + + L++IDE
Sbjct: 588 LQDY-GVKVRELSGDQTLTRQQIDETQIIVTTPEKWDIITRKSGDRTYTQLVKLLIIDEI 646
Query: 75 HMLNEPQRGPILECVVSKVLY----LKKSIQIFAMSATIGNINALSTFI-----EGITYV 125
H+L++ RGP+LE +V++ + K+ I++ +SAT+ N ++ F+ +G+ +
Sbjct: 647 HLLHD-NRGPVLESIVARTVRQIETTKEHIRLVGLSATLPNYEDVALFLRVDPKKGLFHF 705
Query: 126 ENS-RPTK-HSEYVTVD-KRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMV 182
+NS RP + +Y+ + K+ Q F ++L Y S G V
Sbjct: 706 DNSYRPVALYQQYIGITVKKPLQRFQ-------LMNDLCYEKVMS--------FAGKHQV 750
Query: 183 LIFCSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLI--EALKEENDGKLSTNLEECILY 240
LIF S+ S A ++ D + KED E L D S L++ + Y
Sbjct: 751 LIFVHSRKETSKTARAIR-DAALANDTLSRFLKEDSASREILHTHTDLVKSNELKDLLPY 809
Query: 241 GVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYV------- 293
G A HHA +T +R+L+E+ + G +Q++ T+TLA GVNLPA VII+ + +
Sbjct: 810 GFAIHHAGMTRVDRQLVEDLFADGHIQVLVSTATLAWGVNLPAHCVIIKGTQIYNPEKGA 869
Query: 294 GRDFISLNMYKQMVGRAGRTGLQESGESIMLC--KTMQDFLRFSSMMNAGPEPISSHMDP 351
+ L++ QM+GRAGR G I++ +Q +L S+MN PI S
Sbjct: 870 WTELSPLDVM-QMLGRAGRPQFDSEGTGIIITGHSELQYYL---SLMNQQ-LPIESQFVS 924
Query: 352 PTLVDLILEVVAANLCSSLEDVKTLIKHTLFY--QLKSP------EDQQTFLETTLSEIV 403
L E+V + ++ E + +T Y L++P D T + TL E
Sbjct: 925 KLADQLNAEIVLGTVQNARE-ASNWLGYTYLYVRMLRNPTLYGLAADAPT-RDITLEERR 982
Query: 404 ASLLASKGTMLTMN-------EAGHLSLTSIAKAAVQAGLSH 438
A L+ S T+L N ++G+ +T + + A ++H
Sbjct: 983 ADLIHSAATILDKNNLVKYDRKSGYFQVTDLGRIASYYYITH 1024
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 85/365 (23%), Positives = 158/365 (43%), Gaps = 36/365 (9%)
Query: 37 LNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYL 96
L + I I T EK L Q + ++ L +IDE H++ Q GP+LE +VS++ Y+
Sbjct: 1449 LERGQIIISTPEKWDALSRRWKQRKYVQQVSLFIIDELHLIGG-QGGPVLEVIVSRMRYI 1507
Query: 97 ----KKSIQIFAMSATIGNINALSTFIEGIT-----YVENSRPTKHSEYVT-VDKRVFQS 146
+ I+I A+S ++ N + +I + + RP ++ VD F++
Sbjct: 1508 ASQIENKIRIVALSTSLANAKDIGDWIGATSHGLFNFPPGVRPVPLEIHIQGVDIANFEA 1567
Query: 147 FDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRLQFDRFPG 206
Y + ++ G P V + ++ + + ++ +L F
Sbjct: 1568 RMQAMTKPTYTAIVQHAKNGK-PAIVFVPTRKHVRLTAVDIMTYSSADNGEKLPF----- 1621
Query: 207 TKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTL 266
+ ED+ + + ND L L +GV Y H L++ ++ ++ + + AG +
Sbjct: 1622 ----LLRSLEDIEPFVDKINDEMLKAILR----HGVGYLHEGLSSLDQEVVTQLFEAGWI 1673
Query: 267 QIICCTSTLAAGVNLPAQRVIIRDS--YVGR-----DFISLNMYKQMVGRAGRTGLQESG 319
Q+ +S++ GV L A V++ + Y GR D+ ++ QM+G A R L SG
Sbjct: 1674 QVCVISSSMCWGVPLSAHLVVVMGTQYYDGRENAHTDYPVTDLM-QMMGHASRPLLDNSG 1732
Query: 320 ESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKTLIKH 379
+ ++LC + + A P+ SH+ L D I + A + + +D I
Sbjct: 1733 KCVILCHAPRKEYYKKFLYEAF--PVESHLH-HFLHDNINAEIVAGIIENKQDAVDYITW 1789
Query: 380 TLFYQ 384
TL Y+
Sbjct: 1790 TLMYR 1794
>gi|10435899|dbj|BAB14698.1| unnamed protein product [Homo sapiens]
Length = 774
Score = 109 bits (273), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 105/388 (27%), Positives = 193/388 (49%), Gaps = 44/388 (11%)
Query: 24 AGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRG 83
A + G + +K +++ I +CT EK + + + LI++DE H+L++ RG
Sbjct: 242 AELTGDHQLSKEEISATQIIVCTPEKWDIITRKGGERTYTQLVRLIILDEIHLLHD-DRG 300
Query: 84 PILECVVSKVL----YLKKSIQIFAMSATIGNINALSTFI-----EGITYVENS-RPTK- 132
P+LE +V++ + ++ +++ +SAT+ N ++TF+ +G+ Y +NS RP
Sbjct: 301 PVLEALVARAIRNIEMTQEDVRLIGLSATLPNYEDVATFLRVDPAKGLFYFDNSFRPVPL 360
Query: 133 HSEYVTV-DKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIA 191
YV + +K+ + F + + EI + + + H + ++V + +
Sbjct: 361 ERTYVGITEKKAIKRF--QIMNEIVYEKI-----------MEHAGKNQVLVFVHSRKETG 407
Query: 192 CSNLALR---LQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHAD 248
+ A+R L+ D T +E E L+ E + + L++ +LYG A HHA
Sbjct: 408 KTARAIRDMCLEKD----TLGLFLREGSASTEVLRTEAEQCKNLELKDLLLYGFAIHHAG 463
Query: 249 LTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYV-----GR--DFISLN 301
+T +R L+E+ + +Q++ T+TLA GVNLPA VII+ + V GR + +L+
Sbjct: 464 MTRVDRTLVEDLFADKHIQVLVSTATLAWGVNLPAHTVIIKGTQVYSPEKGRWTELGALD 523
Query: 302 MYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEV 361
+ QM+GRAGR GE I++ + + + S++N PI S M L E+
Sbjct: 524 IL-QMLGRAGRPQYDTKGEGILIT-SHGELQYYLSLLNQ-QLPIESQMVSKLPDMLNAEI 580
Query: 362 VAANLCSSLEDVKTLIKHTLFYQ-LKSP 388
V N+ ++ + V L L+ + L+SP
Sbjct: 581 VLGNVQNAKDAVNWLGYAYLYIRMLRSP 608
>gi|71003526|ref|XP_756429.1| hypothetical protein UM00282.1 [Ustilago maydis 521]
gi|46096034|gb|EAK81267.1| hypothetical protein UM00282.1 [Ustilago maydis 521]
Length = 1962
Score = 109 bits (273), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 107/400 (26%), Positives = 191/400 (47%), Gaps = 59/400 (14%)
Query: 22 EYAGVK-----GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRI-DEIGLIVIDEFH 75
+Y G+K G T++++ + + + T EK + E + ++ L++IDE H
Sbjct: 466 QYLGIKVRELTGDMQMTRQEIAETQMIVTTPEKWDVVTRKPTGEGELATKVRLLIIDEVH 525
Query: 76 MLNEPQRGPILECVVSKVLYLKKS----IQIFAMSATIGNINALSTFI-----EGITYVE 126
+L++ +RG ++E +V++ L L +S I+I +SAT+ N ++ F+ +G+ Y +
Sbjct: 526 LLHD-ERGSVIETIVARTLRLVESSQSLIRIVGLSATLPNYVDVADFLRVNRWQGLFYFD 584
Query: 127 NS-RPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIF 185
+S RP ++ F GK+ ++ NLD + + V LVQ V++F
Sbjct: 585 SSFRPVPLEQH-------FLGVKGKAGSQQSRANLDKACF----EKVSELVQAGHQVMVF 633
Query: 186 CSSKIACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKL----------STNLE 235
++ A L+ + ++++ D+++A +EN K + ++
Sbjct: 634 VHARKETVKTAQTLR-------EMFREEAMGDILQASADENPRKAFFKKELQSSRNREMK 686
Query: 236 ECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIR-----D 290
E G HHA + +R L E + AG +++CCT+TLA GVNLPA V+I+ D
Sbjct: 687 ELFDTGFGIHHAGMLRTDRTLSERMFEAGVTRVLCCTATLAWGVNLPAYAVVIKGTDVYD 746
Query: 291 SYVGRDFISLNMYK--QMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNA--GPEPIS 346
S G+ F+ L++ Q+ GRAGR ++ G +L T QD R S ++A PI
Sbjct: 747 SSAGK-FVDLSILDVLQIFGRAGRPQYEDLGVGYIL--TSQD--RLSHYVDAITSQHPIE 801
Query: 347 SHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQLK 386
S + L E+ + S + V L LF ++K
Sbjct: 802 SKFIGGLIDSLNAEISLGTVASVRDGVSWLGYTYLFTRMK 841
>gi|47678999|dbj|BAD20688.1| mer3 [Coprinopsis cinerea]
Length = 1428
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 92/311 (29%), Positives = 150/311 (48%), Gaps = 39/311 (12%)
Query: 36 QLNKKSIYICTIEKGSKLIGSLIQENRI-DEIGLIVIDEFHMLNEPQRGPILECVVSKVL 94
Q SI + T EK L + RI + L+++DE H+L E RG LE VVS++
Sbjct: 294 QAKDASIIVTTGEKWDSLTRNWSDHERIFSLVHLLLVDEVHVLGE-TRGSTLEVVVSRMK 352
Query: 95 YLKKSIQIFAMSATIGNINALSTFIEG---------ITYVENSRPTKHSEYVTVDKRVFQ 145
+ + +SAT+ NI ++ +I + + E RP K +++V R +
Sbjct: 353 LRGSATRFVLVSATVPNIEDIAAWIGNSKKSGPARVLKFGEEYRPCKLAKHVIGFGRRKE 412
Query: 146 SFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRLQFDRFP 205
D + +A LD L G + H G +L+F +++ A +L
Sbjct: 413 QNDFQ-----FARVLDSKLFG----VIQHHSAGK-PILVFVNTRKGVFQTAEQLM----- 457
Query: 206 GTKEYKKQEKEDLIEALKEENDGKLSTN-----LEECILYGVAYHHADLTAGERRLIEEA 260
KEYK+ E + L + + ++ T+ L E + YG+ HHA LT +RR IE+
Sbjct: 458 --KEYKECETKRL--PVPWTHPSRVDTSFHDKKLTELVSYGIGVHHAGLTMEDRRAIEQL 513
Query: 261 YLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYVGRDFISLNMYK----QMVGRAGRTGLQ 316
Y+ ++++ TSTLA GVNLPA VIIR ++ +S+ QM+GRAGR
Sbjct: 514 YIQKLIRVLVTTSTLAVGVNLPAHLVIIRGVQTFQNGVSVEYSDLDVMQMLGRAGRPQFD 573
Query: 317 ESGESIMLCKT 327
G ++++C++
Sbjct: 574 TEGTAVIMCES 584
>gi|50306067|ref|XP_452995.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49642128|emb|CAH01846.1| KLLA0C17798p [Kluyveromyces lactis]
Length = 2149
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 108/398 (27%), Positives = 184/398 (46%), Gaps = 47/398 (11%)
Query: 1 MVHEKYQSLAKAAEEFKFYLEEYAGVKGQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQE 60
+V E+ + + F + E G +K+Q+ + + + T EK +
Sbjct: 559 LVQEQVREFQRRLHHFGVKVAELTGDSNL---SKQQIEETQLLVATPEKWDVITRKSTDT 615
Query: 61 NRIDEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKS---IQIFAMSATIGNINALST 117
+ + LI+IDE H+L++ +RGP++E +V++VL + ++ A+SAT+ N ++
Sbjct: 616 SFHKLVRLIIIDEVHLLHD-ERGPVIESIVARVLRDTTAEIPTRLVALSATLPNYIDVAK 674
Query: 118 FI----EGITYVENS-RPTKHSEYVTVDKRVFQSFDGKSLTEIYADNLDYSLTGSGPDAV 172
F+ G+ Y +++ RP + Q + G +TE A ++ + D +
Sbjct: 675 FLHVPDNGLFYFDSTFRPCP----------LAQQYCG--ITEKNALKKKNAMNQACYDKL 722
Query: 173 LHLVQGNLMVLIFCSSKIACSNLALRL--------QFDRFPGTKEYKKQEKEDLIEALKE 224
L + V+IF S+ + A L + F GT + +E LK
Sbjct: 723 LEAAKEGHQVIIFVHSRKDTARTARWLIQKLINEDKISAFQGTDKGS-------LEILKT 775
Query: 225 ENDGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQ 284
E+ +L + I YG HHA LT +R L E+ + G L+++ T+TLA GVNLPA
Sbjct: 776 ESSNATDRSLSDLIPYGFGIHHAGLTKDDRSLSEDLFADGLLKVLVSTATLAWGVNLPAH 835
Query: 285 RVIIRDSYV----GRDFISLNMYK--QMVGRAGRTGLQESGESIMLCKTMQDFLRFSSMM 338
VII+ + + D++ L QM+GRAGR +GE I++ T Q +R+ +
Sbjct: 836 TVIIKGTEMYSPEKSDWVMLPPQDILQMLGRAGRPRYDVNGEGIII--TNQSDVRYYLAV 893
Query: 339 NAGPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKTL 376
PI S M + +L E+V N+ S E V L
Sbjct: 894 LNQQLPIESQMISKVVDNLNAEIVLGNVTSLDEAVNWL 931
>gi|449547252|gb|EMD38220.1| hypothetical protein CERSUDRAFT_48078, partial [Ceriporiopsis
subvermispora B]
Length = 1062
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 88/306 (28%), Positives = 152/306 (49%), Gaps = 40/306 (13%)
Query: 41 SIYICTIEKGSKLIGSLIQENRI-DEIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKKS 99
++ + T EK L + +I +I L ++DE H+L E RG LE ++S++ S
Sbjct: 219 NVIVTTGEKWDSLTRNWRSYGQILSQIQLFLVDEVHILTE-TRGSTLEVIISRMKTRGAS 277
Query: 100 IQIFAMSATIGNINALSTFIEG--------ITYVENSRPTKHSEYV--TVDKRVFQSFDG 149
++ +SAT+ NI+ ++ +I + + E RP K S++V K+ F
Sbjct: 278 VRFIVVSATVPNIDDVARWIGDSNGGPATVMEFGEEFRPCKISKFVYGIPRKQGMNDF-- 335
Query: 150 KSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRLQFDRFPGTKE 209
++ LD L + N L+FCS++ + A +L K+
Sbjct: 336 -----VFNRILDAQLY-----KFIEQHSANQPTLVFCSTRKGVTTTAEQL-------LKD 378
Query: 210 YKK--QEKEDLIEALKEENDGKLSTN-LEECILYGVAYHHADLTAGERRLIEEAYLAGTL 266
Y+K + K+ L + + LS +++ G+ HHA +T G+RR IE+ +L L
Sbjct: 379 YEKAAESKQSLPWSRPPRFEESLSNQQVQKLAASGIGVHHAGMTMGDRRTIEDLFLRKIL 438
Query: 267 QIICCTSTLAAGVNLPAQRVIIR-----DSYVGRDFISLNMYKQMVGRAGRTGLQESGES 321
+I+ TSTLA GVNLPA VII+ + + +++ L++ QM+GRAGR + G +
Sbjct: 439 RIVVSTSTLAVGVNLPAHTVIIKGVKTFQNNLSQEYPDLDII-QMIGRAGRPQFDKEGVA 497
Query: 322 IMLCKT 327
++LC+T
Sbjct: 498 VILCET 503
>gi|297818370|ref|XP_002877068.1| rock-N-rollers [Arabidopsis lyrata subsp. lyrata]
gi|297322906|gb|EFH53327.1| rock-N-rollers [Arabidopsis lyrata subsp. lyrata]
Length = 1131
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 103/354 (29%), Positives = 171/354 (48%), Gaps = 49/354 (13%)
Query: 65 EIGLIVIDEFHMLNEPQRGPILECVVSKVLYLKK----------SIQIFAMSATIGNINA 114
+I L++IDE H+LN+P RG LE +VS++ L S+++ A+SATI NI
Sbjct: 158 DIALVLIDEVHLLNDP-RGAALEAIVSRIKILSSNHELRSSPLASVRLLAVSATIPNIED 216
Query: 115 LSTFIEGIT-----YVENSRPTKHSEYVTVDKRVFQSFDGKS--LTEIYADNLDYSLTGS 167
L+ +++ T + E RP K + +VF K+ L E N Y
Sbjct: 217 LAEWLKVPTAGIKRFGEEMRPVK------LTTKVFGYAAAKNDFLFEKRLQNYIY----- 265
Query: 168 GPDAVLHLVQGNLMVLIFCSSKIACSNLALRL-QFDRFPGTKEYKKQEKEDLIEALKEEN 226
D ++ +G L+FCS++ A +L Q G + +E L E L+E +
Sbjct: 266 --DILMQYSKGK-SALVFCSTRKGAQEAAQKLAQTAMTYGYSNPFIKSREQL-ERLREAS 321
Query: 227 DGKLSTNLEECILYGVAYHHADLTAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRV 286
++ IL GV YH+ L +R L+E +L G +Q+IC T+TLA G+NLPA V
Sbjct: 322 PMCSDKQMQSYILQGVGYHNGGLCQKDRSLVEGLFLNGDIQVICTTNTLAHGINLPAHTV 381
Query: 287 IIRDS---------YVGRDFISLNMYKQMVGRAGRTGLQESGESIMLCKTMQDFLRFSSM 337
+I+ + Y+ D +L QM GRAGR ++G I++ + L + ++
Sbjct: 382 VIKSTQHFNKEKGHYMEYDRSTL---LQMCGRAGRPPFDDTGMVIIMTRRETVHL-YENL 437
Query: 338 MNAGPEPISSHMDPPTLVDLILEVVAANLCSSLEDVKTLIKHTLFYQL-KSPED 390
+N G E + S + P + L E+V + ++ + L+ ++ K+PE+
Sbjct: 438 LN-GCEVVESQLLPCLIEHLTTEIVQLTISDITRAIEWMKCSYLYVRMKKNPEN 490
>gi|296818863|ref|XP_002849768.1| activating signal cointegrator 1 complex subunit 3 [Arthroderma
otae CBS 113480]
gi|238840221|gb|EEQ29883.1| activating signal cointegrator 1 complex subunit 3 [Arthroderma
otae CBS 113480]
Length = 1988
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 99/380 (26%), Positives = 180/380 (47%), Gaps = 48/380 (12%)
Query: 33 TKRQLNKKSIYICTIEKGSKLIGSLIQENR-IDEIGLIVIDEFHMLNEPQRGPILECVVS 91
TK+++ + I + T EK + + + ++ L++IDE HML++ +RG ++E +V+
Sbjct: 383 TKQEIVQTQIIVTTPEKWDVVTRKSTGDTELVHKVRLLIIDEVHMLHD-ERGAVIESLVA 441
Query: 92 KVLYLKKS----IQIFAMSATIGNINALSTFIE-----GITYVENS-RPTKHSEYVTVDK 141
+ +S I+I +SAT+ N ++ F++ G+ + + S RP ++
Sbjct: 442 RTQRQVESTQSLIRIVGLSATLPNYLDVADFLKVNRMAGLFFFDASFRPVPLEQH----- 496
Query: 142 RVFQSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSKIACSNLALRLQF 201
F G + ++ DNLD D V +++ +++F S+ N A RL
Sbjct: 497 --FIGVKGDAGSKKSRDNLD----KVSFDKVREMLEAGHQIMVFVHSRKDTVNTA-RLY- 548
Query: 202 DRFPGTKEYKKQEKEDLIEALKEEN--------DGKLSTNLEECILYGVAYHHADLTAGE 253
K +++ DL L EN G + L + + G+ HHA ++ +
Sbjct: 549 -----AKLAMEEQCSDLFSPLDHENYSQALKDLKGTRARELRDLVPKGMGTHHAGMSRSD 603
Query: 254 RRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYV-----GRDFISLNMYK--QM 306
R L+E + G ++++CCT+TLA GVNLPA VII+ + + G+ FI L + Q+
Sbjct: 604 RNLMERLFSQGVVKVLCCTATLAWGVNLPAAAVIIKGTQIYSAQEGK-FIDLGILDVLQI 662
Query: 307 VGRAGRTGLQESGESIMLCKTMQDFLRFSSMMNAGPEPISSHMDPPTLVDLILEVVAANL 366
GRAGR Q++G +C + S + + EPI S + +L E+ +
Sbjct: 663 FGRAGRPQFQDTGIG-FICTPQNKLQHYISAITSQ-EPIESRFSRKLVDNLNAEIALGTV 720
Query: 367 CSSLEDVKTLIKHTLFYQLK 386
S E ++ L LF +++
Sbjct: 721 TSVTEGIQWLGYSYLFVRMR 740
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 86/316 (27%), Positives = 141/316 (44%), Gaps = 49/316 (15%)
Query: 28 GQYPPTKRQLNKKSIYICTIEKGSKLIGSLIQENRIDEIGLIVIDEFHMLNEPQRGPILE 87
G P R + I I T EK + S + ++GL++IDE H+L +RGPILE
Sbjct: 1222 GDNTPDTRTIKNADIIITTPEKWDGISRSWQTRGYVRQVGLVIIDEIHLLAG-ERGPILE 1280
Query: 88 CVVSKVLYL----KKSIQIFAMSATIGNINALSTFI---EGITYVENS-RPTKHSEYVT- 138
+VS++ Y+ K ++++ MS N L+ ++ +G+ +S RP ++
Sbjct: 1281 IIVSRMNYIASQAKGTVRLLGMSTACANARDLADWLGVKKGLYNFRHSVRPVPLEIFIDG 1340
Query: 139 -VDKRVF----QSFDGKSLTEIYADNLDYSLTGSGPDAVLHLVQGNLMVLIFCSSK---- 189
++R F QS + + I PD V++F +S+
Sbjct: 1341 FPEQRGFCPLMQSMNRPTFLAI---------KNHSPDKP---------VIVFVASRRQTR 1382
Query: 190 IACSNLALRLQFDRFPGTKEYKKQEKEDLIEALKEENDGKLSTNLEECILYGVAYHHADL 249
+ +L + P + + +EDL + D L +E + +G+ HHA L
Sbjct: 1383 LTAKDLINYCGMEDDP--RRFVHMSEEDLELNISRVKDAAL----QEALSFGIGLHHAGL 1436
Query: 250 TAGERRLIEEAYLAGTLQIICCTSTLAAGVNLPAQRVIIRDSYV------GRDFISLNMY 303
+R+L EE + +QI+ TSTLA GVNLPA V+++ + G + L
Sbjct: 1437 VESDRQLAEELFANNKIQILIATSTLAWGVNLPAHLVVVKGTQFFDAKAEGYKDMDLTDV 1496
Query: 304 KQMVGRAGRTGLQESG 319
QM+GRAGR SG
Sbjct: 1497 LQMLGRAGRPQFDTSG 1512
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.321 0.136 0.387
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,876,108,873
Number of Sequences: 23463169
Number of extensions: 395250513
Number of successful extensions: 1076730
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 4458
Number of HSP's successfully gapped in prelim test: 3798
Number of HSP's that attempted gapping in prelim test: 1055694
Number of HSP's gapped (non-prelim): 14430
length of query: 693
length of database: 8,064,228,071
effective HSP length: 150
effective length of query: 543
effective length of database: 8,839,720,017
effective search space: 4799967969231
effective search space used: 4799967969231
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 81 (35.8 bits)