Query psy1588
Match_columns 68
No_of_seqs 150 out of 1104
Neff 7.7
Searched_HMMs 46136
Date Fri Aug 16 23:57:25 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy1588.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/1588hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PTZ00381 aldehyde dehydrogenas 99.5 1E-14 2.2E-19 101.8 4.8 65 2-68 387-451 (493)
2 PLN02174 aldehyde dehydrogenas 99.5 2.3E-14 4.9E-19 100.1 5.2 64 1-68 392-455 (484)
3 PLN02203 aldehyde dehydrogenas 99.4 1.2E-13 2.5E-18 96.5 5.0 63 2-68 392-454 (484)
4 KOG2450|consensus 99.4 1.3E-13 2.8E-18 96.3 4.0 51 2-54 446-496 (501)
5 cd07132 ALDH_F3AB Aldehyde deh 99.4 5.4E-13 1.2E-17 92.0 5.0 53 2-54 376-428 (443)
6 cd07559 ALDH_ACDHII_AcoD-like 99.4 5.1E-13 1.1E-17 92.8 4.9 50 2-53 430-479 (480)
7 cd07116 ALDH_ACDHII-AcoD Ralst 99.4 6.7E-13 1.5E-17 92.1 4.9 50 2-53 429-478 (479)
8 cd07136 ALDH_YwdH-P39616 Bacil 99.4 9.2E-13 2E-17 91.2 5.1 53 2-54 376-428 (449)
9 PRK11241 gabD succinate-semial 99.4 7.8E-13 1.7E-17 92.2 4.6 49 2-52 432-480 (482)
10 TIGR03216 OH_muco_semi_DH 2-hy 99.4 9.2E-13 2E-17 91.4 4.8 50 2-53 431-480 (481)
11 cd07117 ALDH_StaphAldA1 Unchar 99.4 1E-12 2.2E-17 91.3 4.9 50 2-53 425-474 (475)
12 cd07140 ALDH_F1L_FTFDH 10-form 99.3 1E-12 2.2E-17 91.6 4.6 50 2-53 436-485 (486)
13 TIGR03374 ABALDH 1-pyrroline d 99.3 1E-12 2.2E-17 91.3 4.5 49 2-52 423-471 (472)
14 PLN02766 coniferyl-aldehyde de 99.3 1.2E-12 2.6E-17 91.5 4.6 52 2-55 445-496 (501)
15 PLN02467 betaine aldehyde dehy 99.3 1.3E-12 2.9E-17 91.4 4.8 61 2-64 439-502 (503)
16 PRK10090 aldehyde dehydrogenas 99.3 1.4E-12 2.9E-17 89.5 4.6 50 2-53 358-407 (409)
17 cd07113 ALDH_PADH_NahF Escheri 99.3 1.4E-12 3E-17 90.5 4.7 50 2-53 427-476 (477)
18 PRK13252 betaine aldehyde dehy 99.3 1.7E-12 3.7E-17 90.2 4.8 51 2-54 431-481 (488)
19 PRK13473 gamma-aminobutyraldeh 99.3 1.8E-12 4E-17 89.7 4.6 50 2-53 424-473 (475)
20 TIGR02299 HpaE 5-carboxymethyl 99.3 2E-12 4.4E-17 89.8 4.7 51 2-54 428-478 (488)
21 PRK13968 putative succinate se 99.3 2.1E-12 4.6E-17 89.4 4.6 50 2-53 411-460 (462)
22 cd07094 ALDH_F21_LactADH-like 99.3 1.8E-12 3.9E-17 89.2 4.1 49 2-51 404-452 (453)
23 PLN02466 aldehyde dehydrogenas 99.3 2.8E-12 6E-17 90.5 5.0 51 2-54 482-532 (538)
24 cd07142 ALDH_F2BC Arabidosis a 99.3 2.1E-12 4.5E-17 89.6 4.2 48 2-51 428-475 (476)
25 cd07141 ALDH_F1AB_F2_RALDH1 NA 99.3 2.5E-12 5.4E-17 89.3 4.5 49 2-52 432-480 (481)
26 PRK09847 gamma-glutamyl-gamma- 99.3 2.9E-12 6.3E-17 89.4 4.8 50 2-53 443-492 (494)
27 cd07144 ALDH_ALD2-YMR170C Sacc 99.3 3E-12 6.6E-17 88.9 4.8 50 2-53 434-483 (484)
28 cd07090 ALDH_F9_TMBADH NAD+-de 99.3 3.5E-12 7.7E-17 87.9 4.9 50 2-53 406-455 (457)
29 PLN02278 succinic semialdehyde 99.3 3.1E-12 6.8E-17 89.3 4.6 50 2-53 446-495 (498)
30 cd07106 ALDH_AldA-AAD23400 Str 99.3 2.5E-12 5.3E-17 88.4 4.0 48 2-51 398-445 (446)
31 PRK09406 gabD1 succinic semial 99.3 3E-12 6.5E-17 88.6 4.4 49 2-52 408-456 (457)
32 cd07102 ALDH_EDX86601 Uncharac 99.3 2.5E-12 5.4E-17 88.4 4.0 48 2-51 404-451 (452)
33 cd07120 ALDH_PsfA-ACA09737 Pse 99.3 2.5E-12 5.5E-17 88.9 4.0 49 2-52 407-455 (455)
34 cd07101 ALDH_SSADH2_GabD2 Myco 99.3 2.6E-12 5.7E-17 88.5 4.0 50 2-51 403-453 (454)
35 cd07107 ALDH_PhdK-like Nocardi 99.3 3.8E-12 8.2E-17 87.8 4.6 50 2-53 406-455 (456)
36 cd07112 ALDH_GABALDH-PuuC Esch 99.3 3.5E-12 7.5E-17 88.2 4.0 48 2-51 414-461 (462)
37 cd07151 ALDH_HBenzADH NADP+-de 99.3 4.9E-12 1.1E-16 87.5 4.6 51 2-53 414-464 (465)
38 cd07147 ALDH_F21_RNP123 Aldehy 99.3 3.9E-12 8.5E-17 87.5 4.1 50 2-52 403-452 (452)
39 cd07143 ALDH_AldA_AN0554 Asper 99.3 5.2E-12 1.1E-16 87.9 4.7 50 2-53 431-480 (481)
40 KOG2456|consensus 99.3 3.5E-13 7.6E-18 92.7 -1.1 65 2-68 381-445 (477)
41 cd07124 ALDH_PutA-P5CDH-RocA D 99.3 5.2E-12 1.1E-16 88.4 4.7 52 2-53 459-511 (512)
42 COG1012 PutA NAD-dependent ald 99.3 8.3E-12 1.8E-16 87.1 5.5 54 1-54 416-469 (472)
43 cd07082 ALDH_F11_NP-GAPDH NADP 99.3 5.2E-12 1.1E-16 87.3 4.5 50 2-52 423-472 (473)
44 cd07133 ALDH_CALDH_CalB Conife 99.3 4.1E-12 9E-17 87.4 3.8 50 2-51 384-433 (434)
45 PLN02315 aldehyde dehydrogenas 99.3 8.3E-12 1.8E-16 87.6 5.3 52 2-54 444-495 (508)
46 cd07098 ALDH_F15-22 Aldehyde d 99.3 6.6E-12 1.4E-16 86.7 4.6 52 2-53 413-464 (465)
47 cd07086 ALDH_F7_AASADH-like NA 99.3 8.2E-12 1.8E-16 86.7 5.1 50 3-53 427-476 (478)
48 cd07119 ALDH_BADH-GbsA Bacillu 99.3 7.3E-12 1.6E-16 86.9 4.8 51 2-54 424-474 (482)
49 cd07100 ALDH_SSADH1_GabD1 Myco 99.3 5.6E-12 1.2E-16 86.5 4.0 48 2-51 381-428 (429)
50 cd07091 ALDH_F1-2_Ald2-like AL 99.2 6E-12 1.3E-16 87.2 4.1 48 2-51 428-475 (476)
51 cd07110 ALDH_F10_BADH Arabidop 99.2 6.8E-12 1.5E-16 86.4 4.3 48 2-51 408-455 (456)
52 cd07099 ALDH_DDALDH Methylomon 99.2 8.1E-12 1.8E-16 85.8 4.5 50 2-51 403-452 (453)
53 cd07148 ALDH_RL0313 Uncharacte 99.2 6E-12 1.3E-16 86.9 3.8 50 2-52 406-455 (455)
54 cd07097 ALDH_KGSADH-YcbD Bacil 99.2 6.3E-12 1.4E-16 87.1 3.9 49 2-51 423-472 (473)
55 cd07109 ALDH_AAS00426 Uncharac 99.2 7.9E-12 1.7E-16 86.1 4.1 49 2-51 405-453 (454)
56 cd07087 ALDH_F3-13-14_CALDH-li 99.2 8.1E-12 1.8E-16 85.7 4.1 50 2-51 376-425 (426)
57 cd07085 ALDH_F6_MMSDH Methylma 99.2 1.1E-11 2.3E-16 86.0 4.7 51 2-53 425-477 (478)
58 PLN00412 NADP-dependent glycer 99.2 1E-11 2.2E-16 86.8 4.5 52 2-54 437-488 (496)
59 cd07149 ALDH_y4uC Uncharacteri 99.2 8.3E-12 1.8E-16 85.6 4.0 49 2-51 404-452 (453)
60 cd07137 ALDH_F3FHI Plant aldeh 99.2 8.7E-12 1.9E-16 85.9 4.0 50 2-51 382-431 (432)
61 cd07118 ALDH_SNDH Gluconobacte 99.2 8.9E-12 1.9E-16 86.0 3.9 48 2-51 406-453 (454)
62 cd07131 ALDH_AldH-CAJ73105 Unc 99.2 1.3E-11 2.8E-16 85.5 4.8 51 2-53 425-476 (478)
63 cd07130 ALDH_F7_AASADH NAD+-de 99.2 1.8E-11 3.9E-16 85.0 5.4 51 2-53 422-472 (474)
64 PLN02419 methylmalonate-semial 99.2 2.2E-11 4.7E-16 87.2 5.8 53 1-54 536-590 (604)
65 cd07150 ALDH_VaniDH_like Pseud 99.2 9.3E-12 2E-16 85.5 3.8 49 2-51 402-450 (451)
66 cd07092 ALDH_ABALDH-YdcW Esche 99.2 1E-11 2.3E-16 85.3 4.1 48 2-51 402-449 (450)
67 cd07134 ALDH_AlkH-like Pseudom 99.2 1.3E-11 2.8E-16 85.0 4.3 50 2-51 383-432 (433)
68 TIGR01236 D1pyr5carbox1 delta- 99.2 1.8E-11 3.8E-16 86.4 5.0 51 4-54 470-521 (533)
69 TIGR03250 PhnAcAld_DH putative 99.2 1.5E-11 3.2E-16 85.4 4.6 51 2-53 420-471 (472)
70 cd07135 ALDH_F14-YMR110C Sacch 99.2 1E-11 2.2E-16 85.6 3.7 50 2-51 386-435 (436)
71 cd07115 ALDH_HMSADH_HapE Pseud 99.2 1.8E-11 4E-16 84.3 5.0 50 2-53 403-452 (453)
72 cd07104 ALDH_BenzADH-like ALDH 99.2 1.2E-11 2.7E-16 84.3 4.1 49 2-51 382-430 (431)
73 PRK09407 gabD2 succinic semial 99.2 1.5E-11 3.3E-16 86.3 4.6 53 2-54 439-492 (524)
74 cd07139 ALDH_AldA-Rv0768 Mycob 99.2 1.4E-11 3E-16 85.2 3.8 47 2-51 424-470 (471)
75 cd07111 ALDH_F16 Aldehyde dehy 99.2 1.4E-11 3.1E-16 85.8 3.9 46 2-49 432-477 (480)
76 cd07145 ALDH_LactADH_F420-Bios 99.2 1.6E-11 3.4E-16 84.6 4.1 50 2-52 407-456 (456)
77 TIGR01237 D1pyr5carbox2 delta- 99.2 2.5E-11 5.3E-16 85.0 4.9 52 2-53 458-510 (511)
78 TIGR01780 SSADH succinate-semi 99.2 1.6E-11 3.5E-16 84.6 3.9 45 2-48 404-448 (448)
79 cd07105 ALDH_SaliADH Salicylal 99.2 1.7E-11 3.8E-16 84.0 4.0 50 2-52 383-432 (432)
80 cd07152 ALDH_BenzADH NAD-depen 99.2 1.8E-11 3.9E-16 84.1 4.0 49 2-51 393-442 (443)
81 cd07089 ALDH_CddD-AldA-like Rh 99.2 2E-11 4.3E-16 84.4 4.2 48 2-51 411-458 (459)
82 cd07088 ALDH_LactADH-AldA Esch 99.2 2E-11 4.3E-16 84.3 4.1 48 2-51 420-467 (468)
83 cd07093 ALDH_F8_HMSADH Human a 99.2 2.4E-11 5.2E-16 83.6 4.3 48 2-51 407-454 (455)
84 TIGR01722 MMSDH methylmalonic 99.2 3.1E-11 6.7E-16 83.8 4.9 51 2-53 424-476 (477)
85 cd07114 ALDH_DhaS Uncharacteri 99.2 2.4E-11 5.3E-16 83.7 4.4 48 2-51 409-456 (457)
86 KOG2451|consensus 99.2 8.7E-12 1.9E-16 85.7 1.8 52 1-54 448-499 (503)
87 TIGR01804 BADH glycine betaine 99.2 2.4E-11 5.2E-16 84.0 4.0 45 2-48 423-467 (467)
88 cd07125 ALDH_PutA-P5CDH Delta( 99.2 3.9E-11 8.4E-16 84.2 4.7 53 2-54 455-508 (518)
89 PRK03137 1-pyrroline-5-carboxy 99.2 3.8E-11 8.2E-16 84.2 4.6 52 2-53 461-513 (514)
90 cd07083 ALDH_P5CDH ALDH subfam 99.2 4.9E-11 1.1E-15 83.3 4.9 52 2-53 447-499 (500)
91 cd07108 ALDH_MGR_2402 Magnetos 99.2 3E-11 6.4E-16 83.3 3.7 48 2-51 408-456 (457)
92 cd07123 ALDH_F4-17_P5CDH Delta 99.1 6.4E-11 1.4E-15 83.2 4.9 51 3-53 468-519 (522)
93 cd07103 ALDH_F5_SSADH_GabD Mit 99.1 5.5E-11 1.2E-15 81.7 4.1 48 2-51 403-450 (451)
94 PLN02418 delta-1-pyrroline-5-c 99.1 6.1E-11 1.3E-15 86.1 4.3 52 1-54 642-697 (718)
95 cd07138 ALDH_CddD_SSP0762 Rhod 99.1 6E-11 1.3E-15 82.0 4.1 47 2-51 419-465 (466)
96 PF00171 Aldedh: Aldehyde dehy 99.1 1.9E-11 4.1E-16 84.4 1.2 48 2-50 415-462 (462)
97 cd07146 ALDH_PhpJ Streptomyces 99.1 7.2E-11 1.6E-15 81.6 3.9 49 2-51 401-450 (451)
98 TIGR03240 arg_catab_astD succi 99.0 3.4E-10 7.4E-15 78.8 4.5 51 2-54 419-469 (484)
99 PRK09457 astD succinylglutamic 99.0 3.3E-10 7.2E-15 79.0 4.4 51 2-54 421-471 (487)
100 TIGR01238 D1pyr5carbox3 delta- 99.0 2.5E-10 5.3E-15 80.1 3.7 47 2-48 452-499 (500)
101 KOG2452|consensus 99.0 4.3E-10 9.3E-15 79.5 3.6 51 1-53 830-880 (881)
102 PRK11904 bifunctional proline 98.9 1.4E-09 3.1E-14 81.6 5.3 54 1-54 973-1027(1038)
103 PRK00197 proA gamma-glutamyl p 98.9 4.3E-10 9.3E-15 77.3 2.2 50 2-53 358-411 (417)
104 cd07128 ALDH_MaoC-N N-terminal 98.9 9E-10 2E-14 77.6 3.8 51 2-52 443-503 (513)
105 cd07095 ALDH_SGSD_AstD N-succi 98.9 8E-10 1.7E-14 76.1 3.2 45 2-47 383-427 (431)
106 PRK11903 aldehyde dehydrogenas 98.9 1.1E-09 2.5E-14 77.1 3.4 50 4-53 450-507 (521)
107 cd07079 ALDH_F18-19_ProA-GPR G 98.9 8E-10 1.7E-14 75.7 2.2 49 2-52 352-404 (406)
108 TIGR02278 PaaN-DH phenylacetic 98.9 1.8E-09 3.9E-14 78.0 4.0 51 4-54 439-497 (663)
109 TIGR01092 P5CS delta l-pyrroli 98.9 2.4E-09 5.3E-14 77.8 4.4 51 2-54 637-691 (715)
110 cd06534 ALDH-SF NAD(P)+-depend 98.9 3E-09 6.5E-14 71.3 4.2 49 2-51 318-366 (367)
111 PRK11563 bifunctional aldehyde 98.8 2.5E-09 5.4E-14 77.2 3.5 53 2-54 447-509 (675)
112 cd07078 ALDH NAD(P)+ dependent 98.8 4.4E-09 9.5E-14 71.7 4.5 49 2-51 383-431 (432)
113 PRK11905 bifunctional proline 98.8 1.3E-08 2.8E-13 77.5 5.1 54 1-54 965-1019(1208)
114 cd07077 ALDH-like NAD(P)+-depe 98.6 1.9E-08 4.2E-13 68.5 2.2 50 2-51 344-396 (397)
115 KOG2454|consensus 98.6 2.3E-08 5E-13 69.4 2.3 53 1-54 480-532 (583)
116 cd07129 ALDH_KGSADH Alpha-Keto 98.6 4.5E-08 9.7E-13 67.9 3.4 44 4-48 402-450 (454)
117 cd07084 ALDH_KGSADH-like ALDH 98.4 1.5E-07 3.2E-12 65.2 3.0 48 2-50 389-440 (442)
118 PRK11809 putA trifunctional tr 98.3 5.8E-07 1.3E-11 69.2 4.5 49 1-49 1062-1111(1318)
119 PRK13805 bifunctional acetalde 98.1 9.1E-07 2E-11 65.5 1.6 53 1-54 391-451 (862)
120 cd07126 ALDH_F12_P5CDH Delta(1 98.0 5.9E-06 1.3E-10 58.3 2.9 37 2-39 434-475 (489)
121 cd07121 ALDH_EutE Ethanolamine 97.8 8.1E-06 1.8E-10 56.6 1.2 33 1-37 377-411 (429)
122 KOG2453|consensus 97.4 0.00018 3.9E-09 49.7 3.8 53 3-56 444-496 (507)
123 PRK15398 aldehyde dehydrogenas 97.3 7.1E-05 1.5E-09 52.5 0.1 48 1-54 407-454 (465)
124 COG4230 Delta 1-pyrroline-5-ca 96.6 0.0014 3.1E-08 47.8 2.3 49 1-49 525-574 (769)
125 KOG2455|consensus 95.4 0.0035 7.6E-08 44.6 -0.5 49 2-50 495-544 (561)
126 TIGR00407 proA gamma-glutamyl 94.6 0.025 5.4E-07 39.2 2.1 46 1-48 349-398 (398)
127 TIGR02518 EutH_ACDH acetaldehy 88.6 0.4 8.7E-06 34.1 2.4 50 1-53 386-444 (488)
128 cd07122 ALDH_F20_ACDH Coenzyme 88.4 0.35 7.5E-06 34.0 2.0 14 1-14 377-390 (436)
129 cd07081 ALDH_F20_ACDH_EutE-lik 88.3 0.3 6.5E-06 34.3 1.6 32 1-32 379-411 (439)
130 cd07127 ALDH_PAD-PaaZ Phenylac 78.1 2.4 5.2E-05 30.8 2.7 44 6-49 498-542 (549)
131 PF05475 Chlam_vir: Chlamydia 31.0 25 0.00054 23.1 0.8 13 2-14 227-239 (264)
132 PF08194 DIM: DIM protein; In 30.6 29 0.00063 16.4 0.8 12 3-14 21-32 (36)
133 TIGR02288 PaaN_2 phenylacetic 25.3 64 0.0014 23.7 2.2 37 4-48 504-541 (551)
134 COG0830 UreF Urease accessory 20.6 47 0.001 21.8 0.7 28 18-53 14-41 (229)
No 1
>PTZ00381 aldehyde dehydrogenase family protein; Provisional
Probab=99.53 E-value=1e-14 Score=101.80 Aligned_cols=65 Identities=45% Similarity=0.689 Sum_probs=53.3
Q ss_pred CeeeeEEEEcCCCCCCCCCCCccccCCCCCCCCcchHHHHHhhhhccEEEEeccchhhhhhcccCCC
Q psy1588 2 RFVEGHSSNNRLISHTPVDTLPFGGVGMSGMGAYHGKYSFDTFTHRKSCLVKDYNPVLEALSAKNEP 68 (68)
Q Consensus 2 ~l~aG~V~IN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~~~~~~~~~~~~~~~~~ 68 (68)
++++|.|+||+...+...+.+||||+|+||+|+++|.+++++|++.|+++.+..+.++. ...+||
T Consensus 387 ~~~sG~v~IN~~~~~~~~~~~PFGG~g~SG~G~~~G~~g~~~fs~~k~v~~~~~~~~~~--~~~~~p 451 (493)
T PTZ00381 387 NTSSGAVVINDCVFHLLNPNLPFGGVGNSGMGAYHGKYGFDTFSHPKPVLNKSTGNSFD--LSLRYP 451 (493)
T ss_pred hCCcceEEECCccccccCCCCCCCCcCcccccccchHHHHHhccceeEEEEccccccCc--ccccCC
Confidence 68999999998765434568999999999999999999999999999999886433222 566776
No 2
>PLN02174 aldehyde dehydrogenase family 3 member H1
Probab=99.51 E-value=2.3e-14 Score=100.11 Aligned_cols=64 Identities=47% Similarity=0.788 Sum_probs=52.4
Q ss_pred CCeeeeEEEEcCCCCCCCCCCCccccCCCCCCCCcchHHHHHhhhhccEEEEeccchhhhhhcccCCC
Q psy1588 1 MRFVEGHSSNNRLISHTPVDTLPFGGVGMSGMGAYHGKYSFDTFTHRKSCLVKDYNPVLEALSAKNEP 68 (68)
Q Consensus 1 ~~l~aG~V~IN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~~~~~~~~~~~~~~~~~ 68 (68)
++|++|+|+||+...+...+.+||||+|+||+|+++|.+++++|++.|+|+++..+. . .+++||
T Consensus 392 ~~l~aG~v~IN~~~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~v~~~~~~~--~--~~~~~p 455 (484)
T PLN02174 392 ATVSAGGIVVNDIAVHLALHTLPFGGVGESGMGAYHGKFSFDAFSHKKAVLYRSLFG--D--SAVRYP 455 (484)
T ss_pred HcCCcceEEECCCcCCCCCCCCCCCCcCccccCccchHHHHHHhcceEEEEECCccC--c--ccccCC
Confidence 378999999998765322357899999999999999999999999999999886432 2 567775
No 3
>PLN02203 aldehyde dehydrogenase
Probab=99.44 E-value=1.2e-13 Score=96.47 Aligned_cols=63 Identities=46% Similarity=0.732 Sum_probs=51.1
Q ss_pred CeeeeEEEEcCCCCCCCCCCCccccCCCCCCCCcchHHHHHhhhhccEEEEeccchhhhhhcccCCC
Q psy1588 2 RFVEGHSSNNRLISHTPVDTLPFGGVGMSGMGAYHGKYSFDTFTHRKSCLVKDYNPVLEALSAKNEP 68 (68)
Q Consensus 2 ~l~aG~V~IN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~~~~~~~~~~~~~~~~~ 68 (68)
++++|.|+||+...+...+.+||||+|+||+|+++|.+++++|++.|+++..+.+ ++ .++|||
T Consensus 392 ~l~~G~V~IN~~~~~~~~~~~PfGG~k~SG~Gr~~g~~~l~~ft~~k~v~~~~~~--~~--~~~~~~ 454 (484)
T PLN02203 392 ETSSGSVTFNDAIIQYACDSLPFGGVGESGFGRYHGKYSFDTFSHEKAVLRRSLL--TE--FEFRYP 454 (484)
T ss_pred hCCcceEEECCcccccCCCCCCCCCcCcccCCccccHHHHHHhcceeEEEEcCcc--Cc--ccccCC
Confidence 6899999999875432346789999999999999999999999999999887642 13 455665
No 4
>KOG2450|consensus
Probab=99.42 E-value=1.3e-13 Score=96.26 Aligned_cols=51 Identities=31% Similarity=0.451 Sum_probs=47.6
Q ss_pred CeeeeEEEEcCCCCCCCCCCCccccCCCCCCCCcchHHHHHhhhhccEEEEec
Q psy1588 2 RFVEGHSSNNRLISHTPVDTLPFGGVGMSGMGAYHGKYSFDTFTHRKSCLVKD 54 (68)
Q Consensus 2 ~l~aG~V~IN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~~~ 54 (68)
+++||+||||+... ....+||||+|+||+||+.+.++++.|++.|+++++-
T Consensus 446 ~l~aGtVwiN~y~~--~~~~~PfgG~K~SG~GRE~g~~~l~~ytevKtv~v~~ 496 (501)
T KOG2450|consen 446 ALQAGTVWINCYNV--FDAQVPFGGFKMSGIGRELGEYGLEAYTEVKTVTVKL 496 (501)
T ss_pred HhcCceEEEecccc--ccccCCccccccccCCccccHHHHhhcceeeEEEEeC
Confidence 58999999999876 6789999999999999999999999999999999874
No 5
>cd07132 ALDH_F3AB Aldehyde dehydrogenase family 3 members A1, A2, and B1 and related proteins. NAD(P)+-dependent, aldehyde dehydrogenase, family 3 members A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and similar sequences are included in this CD. Human ALDH3A1 is a homodimer with a critical role in cellular defense against oxidative stress; it catalyzes the oxidation of various cellular membrane lipid-derived aldehydes. Corneal crystalline ALDH3A1 protects the cornea and underlying lens against UV-induced oxidative stress. Human ALDH3A2, a microsomal homodimer, catalyzes the oxidation of long-chain aliphatic aldehydes to fatty acids. Human ALDH3B1 is highly expressed in the kidney and liver and catalyzes the oxidation of various medium- and long-chain saturated and unsaturated aliphatic aldehydes.
Probab=99.38 E-value=5.4e-13 Score=92.00 Aligned_cols=53 Identities=62% Similarity=1.072 Sum_probs=46.2
Q ss_pred CeeeeEEEEcCCCCCCCCCCCccccCCCCCCCCcchHHHHHhhhhccEEEEec
Q psy1588 2 RFVEGHSSNNRLISHTPVDTLPFGGVGMSGMGAYHGKYSFDTFTHRKSCLVKD 54 (68)
Q Consensus 2 ~l~aG~V~IN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~~~ 54 (68)
++++|+|+||+...+.....+||||+|+||+|+++|.+++++|++.|+++++.
T Consensus 376 ~l~~G~v~IN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~v~~~~ 428 (443)
T cd07132 376 NTSSGGVCVNDTIMHYTLDSLPFGGVGNSGMGAYHGKYSFDTFSHKRSCLVKS 428 (443)
T ss_pred hCCcceEEECCcccccCCCCCCCCCCCcccCCCcccHHHHHHhccccEEEEcc
Confidence 68999999998764322357899999999999999999999999999998775
No 6
>cd07559 ALDH_ACDHII_AcoD-like Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II and Staphylococcus aureus AldA1 (SACOL0154)-like. Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane, as well as, the uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences.
Probab=99.38 E-value=5.1e-13 Score=92.82 Aligned_cols=50 Identities=28% Similarity=0.359 Sum_probs=44.8
Q ss_pred CeeeeEEEEcCCCCCCCCCCCccccCCCCCCCCcchHHHHHhhhhccEEEEe
Q psy1588 2 RFVEGHSSNNRLISHTPVDTLPFGGVGMSGMGAYHGKYSFDTFTHRKSCLVK 53 (68)
Q Consensus 2 ~l~aG~V~IN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~~ 53 (68)
+|++|+|+||+... ..+.+||||+|+||+|+++|.+++++|++.|+++++
T Consensus 430 ~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~g~~~~~~~~~~k~v~~~ 479 (480)
T cd07559 430 GIQTGRVWVNCYHQ--YPAHAPFGGYKKSGIGRETHKMMLDHYQQTKNILVS 479 (480)
T ss_pred hcCcceEEECCCCC--CCCCCCcCCCccCcCCccChHHHHHHhhceEEEEEe
Confidence 68999999997644 456899999999999999999999999999999875
No 7
>cd07116 ALDH_ACDHII-AcoD Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II-like. Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane. These proteins apparently require RpoN factors for expression.
Probab=99.37 E-value=6.7e-13 Score=92.07 Aligned_cols=50 Identities=26% Similarity=0.324 Sum_probs=44.7
Q ss_pred CeeeeEEEEcCCCCCCCCCCCccccCCCCCCCCcchHHHHHhhhhccEEEEe
Q psy1588 2 RFVEGHSSNNRLISHTPVDTLPFGGVGMSGMGAYHGKYSFDTFTHRKSCLVK 53 (68)
Q Consensus 2 ~l~aG~V~IN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~~ 53 (68)
+|++|+|+||+... ....+||||+|+||+|+++|.+++++|++.|+++++
T Consensus 429 ~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~~~~~ 478 (479)
T cd07116 429 GIQAGRVWTNCYHL--YPAHAAFGGYKQSGIGRENHKMMLDHYQQTKNLLVS 478 (479)
T ss_pred hcCcCeEEECCCCC--CCCCCCcCCCccCcCCccChHHHHHHhhceEEEEEe
Confidence 68999999998654 456789999999999999999999999999998764
No 8
>cd07136 ALDH_YwdH-P39616 Bacillus subtilis aldehyde dehydrogenase ywdH-like. Uncharacterized Bacillus subtilis ywdH aldehyde dehydrogenase (locus P39616) most closely related to the ALDHs and fatty ALDHs of families 3 and 14, and similar sequences, are included in this CD.
Probab=99.36 E-value=9.2e-13 Score=91.24 Aligned_cols=53 Identities=57% Similarity=0.886 Sum_probs=46.1
Q ss_pred CeeeeEEEEcCCCCCCCCCCCccccCCCCCCCCcchHHHHHhhhhccEEEEec
Q psy1588 2 RFVEGHSSNNRLISHTPVDTLPFGGVGMSGMGAYHGKYSFDTFTHRKSCLVKD 54 (68)
Q Consensus 2 ~l~aG~V~IN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~~~ 54 (68)
++++|+|+||+...+...+.+||||+|+||+|+++|.+++++||+.|+++++.
T Consensus 376 ~l~~G~v~vN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~~~ 428 (449)
T cd07136 376 NLSFGGGCINDTIMHLANPYLPFGGVGNSGMGSYHGKYSFDTFSHKKSILKKS 428 (449)
T ss_pred hCCcceEEECCccccccCCCCCccCcCcccCCcccCHHHHHHhccceEEEEcC
Confidence 68999999998754222367899999999999999999999999999998875
No 9
>PRK11241 gabD succinate-semialdehyde dehydrogenase I; Provisional
Probab=99.36 E-value=7.8e-13 Score=92.16 Aligned_cols=49 Identities=27% Similarity=0.415 Sum_probs=43.9
Q ss_pred CeeeeEEEEcCCCCCCCCCCCccccCCCCCCCCcchHHHHHhhhhccEEEE
Q psy1588 2 RFVEGHSSNNRLISHTPVDTLPFGGVGMSGMGAYHGKYSFDTFTHRKSCLV 52 (68)
Q Consensus 2 ~l~aG~V~IN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~ 52 (68)
+|++|+|+||+... ....+||||+|+||+|+++|.+++++||+.|++++
T Consensus 432 ~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~g~~g~~~ft~~k~v~~ 480 (482)
T PRK11241 432 ALEYGIVGINTGII--SNEVAPFGGIKASGLGREGSKYGIEDYLEIKYMCI 480 (482)
T ss_pred HcCccEEEECCCCC--CCCCCCcCCccccccCcccHHHHHHHhhcceEEEE
Confidence 68999999998754 34568999999999999999999999999999875
No 10
>TIGR03216 OH_muco_semi_DH 2-hydroxymuconic semialdehyde dehydrogenase. Members of this protein family are 2-hydroxymuconic semialdehyde dehydrogenase. Many aromatic compounds are catabolized by way of the catechol, via the meta-cleavage pathway, to pyruvate and acetyl-CoA. This enzyme performs the second of seven steps in that pathway for catechol degradation.
Probab=99.36 E-value=9.2e-13 Score=91.43 Aligned_cols=50 Identities=26% Similarity=0.337 Sum_probs=44.9
Q ss_pred CeeeeEEEEcCCCCCCCCCCCccccCCCCCCCCcchHHHHHhhhhccEEEEe
Q psy1588 2 RFVEGHSSNNRLISHTPVDTLPFGGVGMSGMGAYHGKYSFDTFTHRKSCLVK 53 (68)
Q Consensus 2 ~l~aG~V~IN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~~ 53 (68)
++++|+|+||+... ..+.+||||+|+||+|+++|.+++++|++.|+++++
T Consensus 431 ~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~g~~~l~~f~~~k~v~~~ 480 (481)
T TIGR03216 431 QMEVGIVWVNSWFL--RDLRTPFGGSKLSGIGREGGVHSLEFYTELTNVCIK 480 (481)
T ss_pred hcCccEEEECCCCC--CCCCCCcCCcccCcCCcCchHHHHHHhhceEEEEEe
Confidence 68999999998765 356789999999999999999999999999998764
No 11
>cd07117 ALDH_StaphAldA1 Uncharacterized Staphylococcus aureus AldA1 (SACOL0154) aldehyde dehydrogenase-like. Uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences are present in this CD.
Probab=99.35 E-value=1e-12 Score=91.26 Aligned_cols=50 Identities=26% Similarity=0.336 Sum_probs=44.6
Q ss_pred CeeeeEEEEcCCCCCCCCCCCccccCCCCCCCCcchHHHHHhhhhccEEEEe
Q psy1588 2 RFVEGHSSNNRLISHTPVDTLPFGGVGMSGMGAYHGKYSFDTFTHRKSCLVK 53 (68)
Q Consensus 2 ~l~aG~V~IN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~~ 53 (68)
+|++|+|+||+... ....+||||+|+||+|+++|.+++++||+.|++++.
T Consensus 425 ~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k~v~~~ 474 (475)
T cd07117 425 AVETGRVWVNTYNQ--IPAGAPFGGYKKSGIGRETHKSMLDAYTQMKNIYID 474 (475)
T ss_pred hCCcceEEECCCCC--CCCCCCCCCCccCcCCCCchHHHHHHHhCeEEEEEe
Confidence 68999999998654 456789999999999999999999999999998764
No 12
>cd07140 ALDH_F1L_FTFDH 10-formyltetrahydrofolate dehydrogenase, ALDH family 1L. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1) in humans, is a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. The ALDH domain is also capable of the oxidation of short chain aldehydes to their corresponding acids.
Probab=99.35 E-value=1e-12 Score=91.65 Aligned_cols=50 Identities=22% Similarity=0.385 Sum_probs=44.8
Q ss_pred CeeeeEEEEcCCCCCCCCCCCccccCCCCCCCCcchHHHHHhhhhccEEEEe
Q psy1588 2 RFVEGHSSNNRLISHTPVDTLPFGGVGMSGMGAYHGKYSFDTFTHRKSCLVK 53 (68)
Q Consensus 2 ~l~aG~V~IN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~~ 53 (68)
+|++|+|+||+... ..+.+||||+|+||+|+++|.+++++|++.|+++++
T Consensus 436 ~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~G~~~l~~ft~~k~v~~~ 485 (486)
T cd07140 436 KLEAGTVFVNTYNK--TDVAAPFGGFKQSGFGKDLGEEALNEYLKTKTVTIE 485 (486)
T ss_pred hCCcceEEECCCCC--CCCCCCcCCcccCcCCCcchHHHHHHhhcEEEEEEe
Confidence 68999999998654 456789999999999999999999999999999764
No 13
>TIGR03374 ABALDH 1-pyrroline dehydrogenase. Members of this protein family are 1-pyrroline dehydrogenase (1.5.1.35), also called gamma-aminobutyraldehyde dehydrogenase. This enzyme can follow putrescine transaminase (EC 2.6.1.82) for a two-step conversion of putrescine to gamma-aminobutyric acid (GABA). The member from Escherichia coli is characterized as a homotetramer that binds one NADH per momomer. This enzyme belongs to the medium-chain aldehyde dehydrogenases, and is quite similar in sequence to the betaine aldehyde dehydrogenase (EC 1.2.1.8) family.
Probab=99.35 E-value=1e-12 Score=91.30 Aligned_cols=49 Identities=27% Similarity=0.432 Sum_probs=44.4
Q ss_pred CeeeeEEEEcCCCCCCCCCCCccccCCCCCCCCcchHHHHHhhhhccEEEE
Q psy1588 2 RFVEGHSSNNRLISHTPVDTLPFGGVGMSGMGAYHGKYSFDTFTHRKSCLV 52 (68)
Q Consensus 2 ~l~aG~V~IN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~ 52 (68)
+|++|+|+||+... ..+.+||||+|+||+|+++|.+++++||+.|++++
T Consensus 423 ~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~i~~ 471 (472)
T TIGR03374 423 RLQYGCTWVNTHFM--LVSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHIMV 471 (472)
T ss_pred hCCcceEEECCCCC--CCCCCCCCCCccCccCccchHHHHHHhhceEEEEE
Confidence 68999999998765 45679999999999999999999999999999875
No 14
>PLN02766 coniferyl-aldehyde dehydrogenase
Probab=99.34 E-value=1.2e-12 Score=91.53 Aligned_cols=52 Identities=29% Similarity=0.392 Sum_probs=46.3
Q ss_pred CeeeeEEEEcCCCCCCCCCCCccccCCCCCCCCcchHHHHHhhhhccEEEEecc
Q psy1588 2 RFVEGHSSNNRLISHTPVDTLPFGGVGMSGMGAYHGKYSFDTFTHRKSCLVKDY 55 (68)
Q Consensus 2 ~l~aG~V~IN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~~~~ 55 (68)
+|++|.|+||+... ..+.+||||+|+||+|+++|.+++++|++.|++++...
T Consensus 445 ~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~G~~~l~~ft~~k~v~~~~~ 496 (501)
T PLN02766 445 SIRAGTIWVNCYFA--FDPDCPFGGYKMSGFGRDQGMDALDKYLQVKSVVTPLY 496 (501)
T ss_pred hCCcceEEECCCCC--CCCCCCcCCcccCcCCccchHHHHHHHhceEEEEEecc
Confidence 68999999998654 45678999999999999999999999999999988643
No 15
>PLN02467 betaine aldehyde dehydrogenase
Probab=99.34 E-value=1.3e-12 Score=91.36 Aligned_cols=61 Identities=20% Similarity=0.173 Sum_probs=50.1
Q ss_pred CeeeeEEEEcCCCCCCCCCCCccccCCCCCCCCcchHHHHHhhhhccEEEEec---cchhhhhhcc
Q psy1588 2 RFVEGHSSNNRLISHTPVDTLPFGGVGMSGMGAYHGKYSFDTFTHRKSCLVKD---YNPVLEALSA 64 (68)
Q Consensus 2 ~l~aG~V~IN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~~~---~~~~~~~~~~ 64 (68)
+|++|+|+||+... ....+||||+|+||+|+++|.+++++|++.|++.... .+.||+.|++
T Consensus 439 ~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~G~~~l~~ft~~k~i~~~~~~~~~~~~~~~~~ 502 (503)
T PLN02467 439 AFQAGIVWINCSQP--CFCQAPWGGIKRSGFGRELGEWGLENYLSVKQVTKYISDEPWGWYPPPSK 502 (503)
T ss_pred hCCcceEEECCCCC--CCCCCCcCCcccCcCCCcchHHHHHHhhCeEEEEEecCCCcccCCCCCCC
Confidence 68999999998754 4567899999999999999999999999999998862 2335565543
No 16
>PRK10090 aldehyde dehydrogenase A; Provisional
Probab=99.34 E-value=1.4e-12 Score=89.45 Aligned_cols=50 Identities=18% Similarity=0.170 Sum_probs=44.7
Q ss_pred CeeeeEEEEcCCCCCCCCCCCccccCCCCCCCCcchHHHHHhhhhccEEEEe
Q psy1588 2 RFVEGHSSNNRLISHTPVDTLPFGGVGMSGMGAYHGKYSFDTFTHRKSCLVK 53 (68)
Q Consensus 2 ~l~aG~V~IN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~~ 53 (68)
++++|+|+||+... .....||||+|+||+|+++|.+++++|++.|+++++
T Consensus 358 ~l~~G~v~iN~~~~--~~~~~pfGG~k~SG~G~~~g~~gl~~f~~~k~v~~~ 407 (409)
T PRK10090 358 GLKFGETYINRENF--EAMQGFHAGWRKSGIGGADGKHGLHEYLQTQVVYLQ 407 (409)
T ss_pred hCCcceEEECCCCC--CCCCCCcCCcccccCCccchHHHHHHhcceEEEEEe
Confidence 68999999999765 345679999999999999999999999999999775
No 17
>cd07113 ALDH_PADH_NahF Escherichia coli NAD+-dependent phenylacetaldehyde dehydrogenase PadA-like. NAD+-dependent, homodimeric, phenylacetaldehyde dehydrogenase (PADH, EC=1.2.1.39) PadA of Escherichia coli involved in the catabolism of 2-phenylethylamine, and other related sequences, are present in this CD. Also included is the Pseudomonas fluorescens ST StyD PADH involved in styrene catabolism, the Sphingomonas sp. LB126 FldD protein involved in fluorene degradation, and the Novosphingobium aromaticivorans NahF salicylaldehyde dehydrogenase involved in the NAD+-dependent conversion of salicylaldehyde to salicylate.
Probab=99.34 E-value=1.4e-12 Score=90.46 Aligned_cols=50 Identities=30% Similarity=0.440 Sum_probs=44.6
Q ss_pred CeeeeEEEEcCCCCCCCCCCCccccCCCCCCCCcchHHHHHhhhhccEEEEe
Q psy1588 2 RFVEGHSSNNRLISHTPVDTLPFGGVGMSGMGAYHGKYSFDTFTHRKSCLVK 53 (68)
Q Consensus 2 ~l~aG~V~IN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~~ 53 (68)
+|++|+|+||++.. ....+||||+|+||+|+++|.+++++||+.|+++++
T Consensus 427 ~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~~ 476 (477)
T cd07113 427 RIEAGTVWVNMHTF--LDPAVPFGGMKQSGIGREFGSAFIDDYTELKSVMIR 476 (477)
T ss_pred hCCcceEEECCCCC--CCCCCCCCCCccccCCccchHHHHHHhhceEEEEEe
Confidence 68999999998654 456789999999999999999999999999998764
No 18
>PRK13252 betaine aldehyde dehydrogenase; Provisional
Probab=99.33 E-value=1.7e-12 Score=90.22 Aligned_cols=51 Identities=25% Similarity=0.348 Sum_probs=45.3
Q ss_pred CeeeeEEEEcCCCCCCCCCCCccccCCCCCCCCcchHHHHHhhhhccEEEEec
Q psy1588 2 RFVEGHSSNNRLISHTPVDTLPFGGVGMSGMGAYHGKYSFDTFTHRKSCLVKD 54 (68)
Q Consensus 2 ~l~aG~V~IN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~~~ 54 (68)
+|++|.|+||+... ..+.+||||+|+||+|+++|.+++++||+.|++++..
T Consensus 431 ~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k~i~~~~ 481 (488)
T PRK13252 431 QLEAGICWINTWGE--SPAEMPVGGYKQSGIGRENGIATLEHYTQIKSVQVEM 481 (488)
T ss_pred hcCccEEEECCCCC--CCCCCCCCCCccCcCCcCChHHHHHHhcceEEEEEeC
Confidence 68999999998643 4567899999999999999999999999999998763
No 19
>PRK13473 gamma-aminobutyraldehyde dehydrogenase; Provisional
Probab=99.32 E-value=1.8e-12 Score=89.69 Aligned_cols=50 Identities=28% Similarity=0.427 Sum_probs=44.9
Q ss_pred CeeeeEEEEcCCCCCCCCCCCccccCCCCCCCCcchHHHHHhhhhccEEEEe
Q psy1588 2 RFVEGHSSNNRLISHTPVDTLPFGGVGMSGMGAYHGKYSFDTFTHRKSCLVK 53 (68)
Q Consensus 2 ~l~aG~V~IN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~~ 53 (68)
+|++|+|+||+... ..+.+||||+|+||+|+++|.+++++||+.|+++++
T Consensus 424 ~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~g~~~~~~~t~~k~i~~~ 473 (475)
T PRK13473 424 RLQYGCTWVNTHFM--LVSEMPHGGQKQSGYGKDMSLYGLEDYTVVRHVMVK 473 (475)
T ss_pred hCCcceEEECCCCC--CCCCCCCCCccccccCccchHHHHHHHhceEEEEEe
Confidence 68999999998765 456789999999999999999999999999998764
No 20
>TIGR02299 HpaE 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase. This model represents the dehydrogenase responsible for the conversion of 5-carboxymethyl-2-hydroxymuconate semialdehyde to 5-carboxymethyl-2-hydroxymuconate (a tricarboxylic acid). This is the step in the degradation of 4-hydroxyphenylacetic acid via homoprotocatechuate following the oxidative opening of the aromatic ring.
Probab=99.32 E-value=2e-12 Score=89.80 Aligned_cols=51 Identities=33% Similarity=0.423 Sum_probs=45.7
Q ss_pred CeeeeEEEEcCCCCCCCCCCCccccCCCCCCCCcchHHHHHhhhhccEEEEec
Q psy1588 2 RFVEGHSSNNRLISHTPVDTLPFGGVGMSGMGAYHGKYSFDTFTHRKSCLVKD 54 (68)
Q Consensus 2 ~l~aG~V~IN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~~~ 54 (68)
+|++|+|+||+... ..+.+||||+|+||+|+++|.+++++|++.|+++++.
T Consensus 428 ~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~g~~~~~~~~~~k~i~~~~ 478 (488)
T TIGR02299 428 ALEAGMIWVNSQNV--RHLPTPFGGVKASGIGREGGTYSFDFYTETKNVALAL 478 (488)
T ss_pred hCCcCeEEECCCCC--CCCCCCCCCCccCcCCccchHHHHHHHhceEEEEEec
Confidence 68999999998764 4567899999999999999999999999999998864
No 21
>PRK13968 putative succinate semialdehyde dehydrogenase; Provisional
Probab=99.31 E-value=2.1e-12 Score=89.43 Aligned_cols=50 Identities=22% Similarity=0.337 Sum_probs=45.0
Q ss_pred CeeeeEEEEcCCCCCCCCCCCccccCCCCCCCCcchHHHHHhhhhccEEEEe
Q psy1588 2 RFVEGHSSNNRLISHTPVDTLPFGGVGMSGMGAYHGKYSFDTFTHRKSCLVK 53 (68)
Q Consensus 2 ~l~aG~V~IN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~~ 53 (68)
++++|.|+||+... ..+.+||||+|+||+|+++|.+++++|++.|++.+.
T Consensus 411 ~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~G~~~l~~ft~~k~v~~~ 460 (462)
T PRK13968 411 RLECGGVFINGYCA--SDARVAFGGVKKSGFGRELSHFGLHEFCNIQTVWKD 460 (462)
T ss_pred hCCcceEEECCCCC--CCCCCCCCCccccccCcCchHHHHHHhcceeEEEEe
Confidence 68999999998754 456789999999999999999999999999999875
No 22
>cd07094 ALDH_F21_LactADH-like ALDH subfamily: NAD+-dependent, lactaldehyde dehydrogenase, ALDH family 21 A1, and related proteins. ALDH subfamily which includes Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123), and NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) and like sequences.
Probab=99.31 E-value=1.8e-12 Score=89.16 Aligned_cols=49 Identities=29% Similarity=0.437 Sum_probs=43.4
Q ss_pred CeeeeEEEEcCCCCCCCCCCCccccCCCCCCCCcchHHHHHhhhhccEEE
Q psy1588 2 RFVEGHSSNNRLISHTPVDTLPFGGVGMSGMGAYHGKYSFDTFTHRKSCL 51 (68)
Q Consensus 2 ~l~aG~V~IN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~ 51 (68)
+|++|.|+||+... ...+.+||||+|+||+|+++|.+++++|++.|+++
T Consensus 404 ~l~~g~v~iN~~~~-~~~~~~pfgG~~~SG~G~~~g~~~~~~~~~~k~i~ 452 (453)
T cd07094 404 KLEVGGVMVNDSSA-FRTDWMPFGGVKESGVGREGVPYAMEEMTEEKTVV 452 (453)
T ss_pred hcCcCeEEEcCCCC-CCCCCCCCCCccccccCcCChHHHHHHHhceeEEe
Confidence 68999999998753 13467999999999999999999999999999885
No 23
>PLN02466 aldehyde dehydrogenase family 2 member
Probab=99.31 E-value=2.8e-12 Score=90.50 Aligned_cols=51 Identities=27% Similarity=0.402 Sum_probs=45.3
Q ss_pred CeeeeEEEEcCCCCCCCCCCCccccCCCCCCCCcchHHHHHhhhhccEEEEec
Q psy1588 2 RFVEGHSSNNRLISHTPVDTLPFGGVGMSGMGAYHGKYSFDTFTHRKSCLVKD 54 (68)
Q Consensus 2 ~l~aG~V~IN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~~~ 54 (68)
+|++|+|+||+... ..+.+||||+|+||+|+++|.+++++|++.|++++..
T Consensus 482 ~l~aG~v~IN~~~~--~~~~~PfGG~k~SG~G~~~G~~gl~~ft~~k~v~~~~ 532 (538)
T PLN02466 482 ALRVGTVWVNCFDV--FDAAIPFGGYKMSGIGREKGIYSLNNYLQVKAVVTPL 532 (538)
T ss_pred hCCeeeEEECCCCC--CCCCCCcCCCCcCccCcccHHHHHHHhcceEEEEEeC
Confidence 68999999998643 4567899999999999999999999999999997764
No 24
>cd07142 ALDH_F2BC Arabidosis aldehyde dehydrogenase family 2 B4, B7, C4-like. Included in this CD is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial homotetramers that oxidize acetaldehyde and glycolaldehyde, but not L-lactaldehyde. Also in this group, is the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde.
Probab=99.30 E-value=2.1e-12 Score=89.57 Aligned_cols=48 Identities=27% Similarity=0.459 Sum_probs=43.2
Q ss_pred CeeeeEEEEcCCCCCCCCCCCccccCCCCCCCCcchHHHHHhhhhccEEE
Q psy1588 2 RFVEGHSSNNRLISHTPVDTLPFGGVGMSGMGAYHGKYSFDTFTHRKSCL 51 (68)
Q Consensus 2 ~l~aG~V~IN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~ 51 (68)
+|++|+|+||+... ..+.+||||+|+||+|+++|.+++++||+.|+++
T Consensus 428 ~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k~v~ 475 (476)
T cd07142 428 ALKAGTVWVNCYDV--FDASIPFGGYKMSGIGREKGIYALNNYLQVKAVV 475 (476)
T ss_pred hCCcceEEECCCCC--CCCCCCCCCCccCcCCccchHHHHHHhhheeEEe
Confidence 68999999998643 4567999999999999999999999999999875
No 25
>cd07141 ALDH_F1AB_F2_RALDH1 NAD+-dependent retinal dehydrogenase 1, ALDH families 1A, 1B, and 2-like. NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36) also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1) in humans, is a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism.
Probab=99.30 E-value=2.5e-12 Score=89.27 Aligned_cols=49 Identities=29% Similarity=0.419 Sum_probs=44.1
Q ss_pred CeeeeEEEEcCCCCCCCCCCCccccCCCCCCCCcchHHHHHhhhhccEEEE
Q psy1588 2 RFVEGHSSNNRLISHTPVDTLPFGGVGMSGMGAYHGKYSFDTFTHRKSCLV 52 (68)
Q Consensus 2 ~l~aG~V~IN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~ 52 (68)
++++|.|+||+... ..+.+||||+|.||+|+++|.+++++||+.|++++
T Consensus 432 ~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k~v~~ 480 (481)
T cd07141 432 ALRAGTVWVNCYNV--VSPQAPFGGYKMSGNGRELGEYGLQEYTEVKTVTI 480 (481)
T ss_pred hcCcCeEEECCCCC--CCCCCCCCCcccCcCCccchHHHHHHHhheEEEEE
Confidence 68999999998654 45678999999999999999999999999999875
No 26
>PRK09847 gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; Provisional
Probab=99.30 E-value=2.9e-12 Score=89.42 Aligned_cols=50 Identities=28% Similarity=0.367 Sum_probs=44.8
Q ss_pred CeeeeEEEEcCCCCCCCCCCCccccCCCCCCCCcchHHHHHhhhhccEEEEe
Q psy1588 2 RFVEGHSSNNRLISHTPVDTLPFGGVGMSGMGAYHGKYSFDTFTHRKSCLVK 53 (68)
Q Consensus 2 ~l~aG~V~IN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~~ 53 (68)
+|++|.|+||+... ..+.+||||+|+||+|+++|.+++++|++.|++++.
T Consensus 443 ~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~g~~~l~~ft~~k~v~~~ 492 (494)
T PRK09847 443 RLKAGSVFVNNYND--GDMTVPFGGYKQSGNGRDKSLHALEKFTELKTIWIS 492 (494)
T ss_pred hCCcceEEECCCCC--CCCCCCcCCCcccccCccchHHHHHHhhceEEEEEe
Confidence 68999999998754 456789999999999999999999999999999764
No 27
>cd07144 ALDH_ALD2-YMR170C Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c)-like. NAD(P)+-dependent Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) and other similar sequences, are present in this CD.
Probab=99.30 E-value=3e-12 Score=88.85 Aligned_cols=50 Identities=30% Similarity=0.501 Sum_probs=44.7
Q ss_pred CeeeeEEEEcCCCCCCCCCCCccccCCCCCCCCcchHHHHHhhhhccEEEEe
Q psy1588 2 RFVEGHSSNNRLISHTPVDTLPFGGVGMSGMGAYHGKYSFDTFTHRKSCLVK 53 (68)
Q Consensus 2 ~l~aG~V~IN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~~ 53 (68)
++++|.|+||+... ..+.+||||+|+||+|+++|.+++++|++.|+++++
T Consensus 434 ~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~~ 483 (484)
T cd07144 434 ELEAGMVWINSSND--SDVGVPFGGFKMSGIGRELGEYGLETYTQTKAVHIN 483 (484)
T ss_pred hcCcCEEEECCCCC--CCCCCCcCCcccCcCCCCchHHHHHHhhceEEEEEe
Confidence 68999999998754 456789999999999999999999999999998764
No 28
>cd07090 ALDH_F9_TMBADH NAD+-dependent 4-trimethylaminobutyraldehyde dehydrogenase, ALDH family 9A1. NAD+-dependent, 4-trimethylaminobutyraldehyde dehydrogenase (TMABADH, EC=1.2.1.47), also known as aldehyde dehydrogenase family 9 member A1 (ALDH9A1) in humans, is a cytosolic tetramer which catalyzes the oxidation of gamma-aminobutyraldehyde involved in 4-aminobutyric acid (GABA) biosynthesis and also oxidizes betaine aldehyde (gamma-trimethylaminobutyraldehyde) which is involved in carnitine biosynthesis.
Probab=99.30 E-value=3.5e-12 Score=87.86 Aligned_cols=50 Identities=26% Similarity=0.428 Sum_probs=44.7
Q ss_pred CeeeeEEEEcCCCCCCCCCCCccccCCCCCCCCcchHHHHHhhhhccEEEEe
Q psy1588 2 RFVEGHSSNNRLISHTPVDTLPFGGVGMSGMGAYHGKYSFDTFTHRKSCLVK 53 (68)
Q Consensus 2 ~l~aG~V~IN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~~ 53 (68)
+|++|.|+||+... ....+||||+|+||+|+++|.+++++||+.|++++.
T Consensus 406 ~l~~G~v~iN~~~~--~~~~~pfGG~k~SG~G~~~g~~~~~~f~~~k~~~~~ 455 (457)
T cd07090 406 QLQAGTCWINTYNI--SPVEVPFGGYKQSGFGRENGTAALEHYTQLKTVYVE 455 (457)
T ss_pred hCCcCeEEECCCCC--CCCCCCcCCCccCcCCccchHHHHHHHhCeEEEEEe
Confidence 68999999998654 456789999999999999999999999999998764
No 29
>PLN02278 succinic semialdehyde dehydrogenase
Probab=99.29 E-value=3.1e-12 Score=89.34 Aligned_cols=50 Identities=28% Similarity=0.424 Sum_probs=44.7
Q ss_pred CeeeeEEEEcCCCCCCCCCCCccccCCCCCCCCcchHHHHHhhhhccEEEEe
Q psy1588 2 RFVEGHSSNNRLISHTPVDTLPFGGVGMSGMGAYHGKYSFDTFTHRKSCLVK 53 (68)
Q Consensus 2 ~l~aG~V~IN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~~ 53 (68)
+|++|+|+||+... ..+.+||||+|+||+|+++|.+++++|++.|++.+.
T Consensus 446 ~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~G~~~l~~ft~~k~i~~~ 495 (498)
T PLN02278 446 ALEYGIVGVNEGLI--STEVAPFGGVKQSGLGREGSKYGIDEYLEIKYVCLG 495 (498)
T ss_pred hCCcCeEEECCCCC--CCCCCCcCCcccCcCCccchHHHHHHhheeEEEEEe
Confidence 68999999998764 345789999999999999999999999999998765
No 30
>cd07106 ALDH_AldA-AAD23400 Streptomyces aureofaciens putative aldehyde dehydrogenase AldA (AAD23400)-like. Putative aldehyde dehydrogenase, AldA, from Streptomyces aureofaciens (locus AAD23400) and other similar sequences are present in this CD.
Probab=99.29 E-value=2.5e-12 Score=88.42 Aligned_cols=48 Identities=25% Similarity=0.305 Sum_probs=43.7
Q ss_pred CeeeeEEEEcCCCCCCCCCCCccccCCCCCCCCcchHHHHHhhhhccEEE
Q psy1588 2 RFVEGHSSNNRLISHTPVDTLPFGGVGMSGMGAYHGKYSFDTFTHRKSCL 51 (68)
Q Consensus 2 ~l~aG~V~IN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~ 51 (68)
++++|.|+||+... ..+.+||||+|+||+|+++|.+++++||+.|++.
T Consensus 398 ~~~~G~v~iN~~~~--~~~~~pfGG~~~SG~G~~~g~~~~~~~t~~k~v~ 445 (446)
T cd07106 398 RLEAGTVWINTHGA--LDPDAPFGGHKQSGIGVEFGIEGLKEYTQTQVIN 445 (446)
T ss_pred hCCccEEEECCCCC--CCCCCCCCCccccccCccchHHHHHHhhceeEEe
Confidence 68999999998764 4678999999999999999999999999999875
No 31
>PRK09406 gabD1 succinic semialdehyde dehydrogenase; Reviewed
Probab=99.29 E-value=3e-12 Score=88.62 Aligned_cols=49 Identities=27% Similarity=0.390 Sum_probs=44.0
Q ss_pred CeeeeEEEEcCCCCCCCCCCCccccCCCCCCCCcchHHHHHhhhhccEEEE
Q psy1588 2 RFVEGHSSNNRLISHTPVDTLPFGGVGMSGMGAYHGKYSFDTFTHRKSCLV 52 (68)
Q Consensus 2 ~l~aG~V~IN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~ 52 (68)
++++|+|+||+... ..+.+||||+|+||+|+++|.+++++|++.|++.+
T Consensus 408 ~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~ 456 (457)
T PRK09406 408 DLEAGQVFINGMTV--SYPELPFGGVKRSGYGRELSAHGIREFCNIKTVWI 456 (457)
T ss_pred hCCcceEEECCCCC--CCCCCCCCCccccccCccchHHHHHHhhceEEEEe
Confidence 68999999998754 45679999999999999999999999999999864
No 32
>cd07102 ALDH_EDX86601 Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (EDX86601). Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (locus EDX86601) and other similar sequences, are present in this CD.
Probab=99.29 E-value=2.5e-12 Score=88.35 Aligned_cols=48 Identities=27% Similarity=0.286 Sum_probs=43.2
Q ss_pred CeeeeEEEEcCCCCCCCCCCCccccCCCCCCCCcchHHHHHhhhhccEEE
Q psy1588 2 RFVEGHSSNNRLISHTPVDTLPFGGVGMSGMGAYHGKYSFDTFTHRKSCL 51 (68)
Q Consensus 2 ~l~aG~V~IN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~ 51 (68)
++++|.|+||++.. ..+.+||||+|+||+|+++|.+++++|++.|+++
T Consensus 404 ~l~~G~v~iN~~~~--~~~~~pfgG~k~SG~G~~~g~~~~~~~~~~k~~~ 451 (452)
T cd07102 404 QLETGTVFMNRCDY--LDPALAWTGVKDSGRGVTLSRLGYDQLTRPKSYH 451 (452)
T ss_pred HcCcceEEECCCCC--CCCCCCCCCccccccCccchHHHHHHHhceeEEe
Confidence 68999999998764 4567899999999999999999999999999885
No 33
>cd07120 ALDH_PsfA-ACA09737 Pseudomonas putida aldehyde dehydrogenase PsfA (ACA09737)-like. Included in this CD is the aldehyde dehydrogenase (PsfA, locus ACA09737) of Pseudomonas putida involved in furoic acid metabolism. Transcription of psfA was induced in response to 2-furoic acid, furfuryl alcohol, and furfural.
Probab=99.29 E-value=2.5e-12 Score=88.92 Aligned_cols=49 Identities=22% Similarity=0.276 Sum_probs=43.8
Q ss_pred CeeeeEEEEcCCCCCCCCCCCccccCCCCCCCCcchHHHHHhhhhccEEEE
Q psy1588 2 RFVEGHSSNNRLISHTPVDTLPFGGVGMSGMGAYHGKYSFDTFTHRKSCLV 52 (68)
Q Consensus 2 ~l~aG~V~IN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~ 52 (68)
++++|.|+||++.. ..+.+||||+|+||+|+++|++++++||+.|++++
T Consensus 407 ~l~~G~v~iN~~~~--~~~~~pfGG~k~SG~G~~~g~~~l~~ft~~k~v~~ 455 (455)
T cd07120 407 AIRAGTVWINDWNK--LFAEAEEGGYRQSGLGRLHGVAALEDFIEYKHIYL 455 (455)
T ss_pred hcCcceEEECCCCC--CCCCCCcCCccccccCccchHHHHHHHhceeEEeC
Confidence 68999999999765 45678999999999999999999999999999863
No 34
>cd07101 ALDH_SSADH2_GabD2 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 2-like. Succinate-semialdehyde dehydrogenase 2 (SSADH2) and similar proteins are in this CD. SSADH1 (GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate. SSADH activity in Mycobacterium tuberculosis is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731), however ,the Vmax of GabD1 was shown to be much higher than that of GabD2, and GabD2 (SSADH2) is likely to serve physiologically as a dehydrogenase for a different aldehyde(s).
Probab=99.29 E-value=2.6e-12 Score=88.51 Aligned_cols=50 Identities=24% Similarity=0.349 Sum_probs=43.2
Q ss_pred CeeeeEEEEcCCCCC-CCCCCCccccCCCCCCCCcchHHHHHhhhhccEEE
Q psy1588 2 RFVEGHSSNNRLISH-TPVDTLPFGGVGMSGMGAYHGKYSFDTFTHRKSCL 51 (68)
Q Consensus 2 ~l~aG~V~IN~~~~~-~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~ 51 (68)
+|++|+|+||+...+ ...+.+||||+|+||+|+++|.+++++|++.|+++
T Consensus 403 ~l~~G~v~iN~~~~~~~~~~~~PfgG~k~SG~G~~~g~~~~~~~~~~k~v~ 453 (454)
T cd07101 403 RLRAGTVNVNEGYAAAWASIDAPMGGMKDSGLGRRHGAEGLLKYTETQTVA 453 (454)
T ss_pred hcCcceEEECCCCCcCcCCCCCCCCcccccccCccchHHHHHHhcceEEEe
Confidence 689999999987542 12456899999999999999999999999999886
No 35
>cd07107 ALDH_PhdK-like Nocardioides 2-carboxybenzaldehyde dehydrogenase, PhdK-like. Nocardioides sp. strain KP72-carboxybenzaldehyde dehydrogenase (PhdK), an enzyme involved in phenanthrene degradation, and other similar sequences, are present in this CD.
Probab=99.29 E-value=3.8e-12 Score=87.77 Aligned_cols=50 Identities=28% Similarity=0.294 Sum_probs=44.9
Q ss_pred CeeeeEEEEcCCCCCCCCCCCccccCCCCCCCCcchHHHHHhhhhccEEEEe
Q psy1588 2 RFVEGHSSNNRLISHTPVDTLPFGGVGMSGMGAYHGKYSFDTFTHRKSCLVK 53 (68)
Q Consensus 2 ~l~aG~V~IN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~~ 53 (68)
++++|.|+||+... ..+.+||||+|+||+|+++|.+++++|++.|+++++
T Consensus 406 ~l~~G~v~iN~~~~--~~~~~pfgG~k~SG~G~~~g~~~~~~~~~~k~v~~~ 455 (456)
T cd07107 406 RVEAGYVWINGSSR--HFLGAPFGGVKNSGIGREECLEELLSYTQEKNVNVR 455 (456)
T ss_pred hcCcCEEEECCCCC--CCCCCCcCCcccccCCcCchHHHHHHhhceEEEEEe
Confidence 68999999998765 456789999999999999999999999999998764
No 36
>cd07112 ALDH_GABALDH-PuuC Escherichia coli NADP+-dependent gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC-like. NADP+-dependent, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (GABALDH) PuuC of Escherichia coli which catalyzes the conversion of putrescine to 4-aminobutanoate and other similar sequences are present in this CD.
Probab=99.28 E-value=3.5e-12 Score=88.21 Aligned_cols=48 Identities=29% Similarity=0.327 Sum_probs=43.2
Q ss_pred CeeeeEEEEcCCCCCCCCCCCccccCCCCCCCCcchHHHHHhhhhccEEE
Q psy1588 2 RFVEGHSSNNRLISHTPVDTLPFGGVGMSGMGAYHGKYSFDTFTHRKSCL 51 (68)
Q Consensus 2 ~l~aG~V~IN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~ 51 (68)
+|++|.|+||+... ..+.+||||+|+||+|+++|.+++++|++.|+++
T Consensus 414 ~l~~g~v~iN~~~~--~~~~~PfgG~k~SG~G~~~g~~~~~~f~~~k~i~ 461 (462)
T cd07112 414 RLRAGTVWVNCFDE--GDITTPFGGFKQSGNGRDKSLHALDKYTELKTTW 461 (462)
T ss_pred hcCcceEEECCCCC--CCCCCCCCCcccccCCccchHHHHHHHhceeEEE
Confidence 68999999998654 4567999999999999999999999999999875
No 37
>cd07151 ALDH_HBenzADH NADP+-dependent p-hydroxybenzaldehyde dehydrogenase-like. NADP+-dependent, p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid and other related sequences are included in this CD.
Probab=99.27 E-value=4.9e-12 Score=87.47 Aligned_cols=51 Identities=29% Similarity=0.516 Sum_probs=44.8
Q ss_pred CeeeeEEEEcCCCCCCCCCCCccccCCCCCCCCcchHHHHHhhhhccEEEEe
Q psy1588 2 RFVEGHSSNNRLISHTPVDTLPFGGVGMSGMGAYHGKYSFDTFTHRKSCLVK 53 (68)
Q Consensus 2 ~l~aG~V~IN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~~ 53 (68)
+|++|+|+||+...+ ..+.+||||+|+||+|+++|.+++++|++.|++++.
T Consensus 414 ~l~~G~v~iN~~~~~-~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~~~~~ 464 (465)
T cd07151 414 RIDAGMTHINDQPVN-DEPHVPFGGEKNSGLGRFNGEWALEEFTTDKWISVQ 464 (465)
T ss_pred hCCcCeEEECCCCCC-CCCCCCCCCcccccCCcCChHHHHHHhhceEEEEec
Confidence 689999999987642 245789999999999999999999999999998764
No 38
>cd07147 ALDH_F21_RNP123 Aldehyde dehydrogenase family 21A1-like. Aldehyde dehydrogenase ALDH21A1 (gene name RNP123) was first described in the moss Tortula ruralis and is believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and ALDH21A1 expression represents a unique stress tolerance mechanism. So far, of plants, only the bryophyte sequence has been observed, but similar protein sequences from bacteria and archaea are also present in this CD.
Probab=99.27 E-value=3.9e-12 Score=87.45 Aligned_cols=50 Identities=26% Similarity=0.458 Sum_probs=43.5
Q ss_pred CeeeeEEEEcCCCCCCCCCCCccccCCCCCCCCcchHHHHHhhhhccEEEE
Q psy1588 2 RFVEGHSSNNRLISHTPVDTLPFGGVGMSGMGAYHGKYSFDTFTHRKSCLV 52 (68)
Q Consensus 2 ~l~aG~V~IN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~ 52 (68)
++++|.|+||+... .....+||||+|+||+|+++|.+++++|++.|++++
T Consensus 403 ~~~~G~v~vN~~~~-~~~~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~i~~ 452 (452)
T cd07147 403 ELEVGGVVINDVPT-FRVDHMPYGGVKDSGIGREGVRYAIEEMTEPRLLVI 452 (452)
T ss_pred HcCcceEEECCCCC-CCCCCCCcCCccccccCCCChHHHHHHhcceeEEeC
Confidence 68999999998653 134578999999999999999999999999999864
No 39
>cd07143 ALDH_AldA_AN0554 Aspergillus nidulans aldehyde dehydrogenase, AldA (AN0554)-like. NAD(P)+-dependent aldehyde dehydrogenase (AldA) of Aspergillus nidulans (locus AN0554), and other similar sequences, are present in this CD.
Probab=99.27 E-value=5.2e-12 Score=87.88 Aligned_cols=50 Identities=26% Similarity=0.441 Sum_probs=44.7
Q ss_pred CeeeeEEEEcCCCCCCCCCCCccccCCCCCCCCcchHHHHHhhhhccEEEEe
Q psy1588 2 RFVEGHSSNNRLISHTPVDTLPFGGVGMSGMGAYHGKYSFDTFTHRKSCLVK 53 (68)
Q Consensus 2 ~l~aG~V~IN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~~ 53 (68)
+|++|.|+||+... ..+.+||||+|+||+|+++|.+++++||+.|+++++
T Consensus 431 ~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~G~~~l~~~t~~k~i~~~ 480 (481)
T cd07143 431 ALKAGTVWVNCYNL--LHHQVPFGGYKQSGIGRELGEYALENYTQIKAVHIN 480 (481)
T ss_pred hcCcCeEEECCCCC--CCCCCCCCCccccccCcccHHHHHHHHhCeEEEEEe
Confidence 68999999998754 456789999999999999999999999999998764
No 40
>KOG2456|consensus
Probab=99.27 E-value=3.5e-13 Score=92.66 Aligned_cols=65 Identities=51% Similarity=0.903 Sum_probs=58.1
Q ss_pred CeeeeEEEEcCCCCCCCCCCCccccCCCCCCCCcchHHHHHhhhhccEEEEeccchhhhhhcccCCC
Q psy1588 2 RFVEGHSSNNRLISHTPVDTLPFGGVGMSGMGAYHGKYSFDTFTHRKSCLVKDYNPVLEALSAKNEP 68 (68)
Q Consensus 2 ~l~aG~V~IN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~~~~~~~~~~~~~~~~~ 68 (68)
++.+|.|.+|+...|..-..+||||++.||+|+.+|+.+++.|++.|++..++.+. +.++..|||
T Consensus 381 ~tsSGgvt~ND~i~H~~~~~lPFGGVG~SGmG~YhGK~sFdTFSH~k~~l~rs~~~--d~~~~~RYP 445 (477)
T KOG2456|consen 381 ETSSGGVTVNDVIMHVTLDSLPFGGVGESGMGRYHGKFSFDTFSHEKSCLLRSLGG--DKLLALRYP 445 (477)
T ss_pred hccCCCeeecceEEEEEeeccCcCCcCccccccccccccccccccchhhhhccccc--chhhhhcCC
Confidence 46789999999887755678999999999999999999999999999999887765 777899998
No 41
>cd07124 ALDH_PutA-P5CDH-RocA Delta(1)-pyrroline-5-carboxylate dehydrogenase, RocA. Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), RocA: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. The proline catabolic enzymes, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). In this CD, monofunctional enzyme sequences such as seen in the Bacillus subtilis RocA P5CDH are also present. These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis.
Probab=99.27 E-value=5.2e-12 Score=88.36 Aligned_cols=52 Identities=33% Similarity=0.436 Sum_probs=44.5
Q ss_pred CeeeeEEEEcCCCCCCCCCCCccccCCCCCCC-CcchHHHHHhhhhccEEEEe
Q psy1588 2 RFVEGHSSNNRLISHTPVDTLPFGGVGMSGMG-AYHGKYSFDTFTHRKSCLVK 53 (68)
Q Consensus 2 ~l~aG~V~IN~~~~~~~~~~~PfGG~k~SG~G-~~~g~~~l~~~t~~k~v~~~ 53 (68)
++++|+|+||+...+.....+||||+|+||+| +++|.+++++||+.|+++++
T Consensus 459 ~l~~G~v~vN~~~~~~~~~~~PfGG~k~SG~G~~~~g~~~~~~~t~~k~v~~~ 511 (512)
T cd07124 459 EFEVGNLYANRKITGALVGRQPFGGFKMSGTGSKAGGPDYLLQFMQPKTVTEN 511 (512)
T ss_pred hCCcceEEECCCCCCCCCCCCCCCccccccCCCccCcHHHHHHhccEEEEEEe
Confidence 68999999998764323356899999999999 78899999999999999775
No 42
>COG1012 PutA NAD-dependent aldehyde dehydrogenases [Energy production and conversion]
Probab=99.27 E-value=8.3e-12 Score=87.08 Aligned_cols=54 Identities=35% Similarity=0.559 Sum_probs=46.6
Q ss_pred CCeeeeEEEEcCCCCCCCCCCCccccCCCCCCCCcchHHHHHhhhhccEEEEec
Q psy1588 1 MRFVEGHSSNNRLISHTPVDTLPFGGVGMSGMGAYHGKYSFDTFTHRKSCLVKD 54 (68)
Q Consensus 1 ~~l~aG~V~IN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~~~ 54 (68)
.+|++|+|+||+...+.....+||||+|+||+|+++|.+++++|++.|++.++.
T Consensus 416 ~~l~aG~v~iN~~~~~~~~~~~PFGG~k~SG~G~~~g~~~~~~~~~~k~v~~~~ 469 (472)
T COG1012 416 RRLEAGMVGINDYTGGADIAYLPFGGVKQSGLGREGGKYGLEEFTEVKTVTIKL 469 (472)
T ss_pred hcCCeeEEEECCCCCCCCCCCCCCCCcccccCCccchHHHHHHHhcceEEEEec
Confidence 378999999998753224567899999999999999999999999999998764
No 43
>cd07082 ALDH_F11_NP-GAPDH NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase and ALDH family 11. NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase (NP-GAPDH, EC=1.2.1.9) catalyzes the irreversible oxidation of glyceraldehyde 3-phosphate to 3-phosphoglycerate generating NADPH for biosynthetic reactions. This CD also includes the Arabidopsis thaliana osmotic-stress-inducible ALDH family 11, ALDH11A3 and similar sequences. In autotrophic eukaryotes, NP-GAPDH generates NADPH for biosynthetic processes from photosynthetic glyceraldehyde-3-phosphate exported from the chloroplast and catalyzes one of the classic glycolytic bypass reactions unique to plants.
Probab=99.27 E-value=5.2e-12 Score=87.35 Aligned_cols=50 Identities=24% Similarity=0.295 Sum_probs=43.8
Q ss_pred CeeeeEEEEcCCCCCCCCCCCccccCCCCCCCCcchHHHHHhhhhccEEEE
Q psy1588 2 RFVEGHSSNNRLISHTPVDTLPFGGVGMSGMGAYHGKYSFDTFTHRKSCLV 52 (68)
Q Consensus 2 ~l~aG~V~IN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~ 52 (68)
++++|+|+||+...+ ....+||||+|+||+|+++|.+++++|++.|++++
T Consensus 423 ~l~~G~v~iN~~~~~-~~~~~pfGG~k~SG~g~~~g~~~l~~~~~~k~i~~ 472 (473)
T cd07082 423 ALEVGTVNINSKCQR-GPDHFPFLGRKDSGIGTQGIGDALRSMTRRKGIVI 472 (473)
T ss_pred hCCcceEEECCCCCC-CCCCCCCCcccccccCCCChHHHHHHhhceeEEEE
Confidence 689999999987642 23468999999999999999999999999999875
No 44
>cd07133 ALDH_CALDH_CalB Coniferyl aldehyde dehydrogenase-like. Coniferyl aldehyde dehydrogenase (CALDH, EC=1.2.1.68) of Pseudomonas sp. strain HR199 (CalB) which catalyzes the NAD+-dependent oxidation of coniferyl aldehyde to ferulic acid, and similar sequences, are present in this CD.
Probab=99.26 E-value=4.1e-12 Score=87.40 Aligned_cols=50 Identities=52% Similarity=0.836 Sum_probs=43.3
Q ss_pred CeeeeEEEEcCCCCCCCCCCCccccCCCCCCCCcchHHHHHhhhhccEEE
Q psy1588 2 RFVEGHSSNNRLISHTPVDTLPFGGVGMSGMGAYHGKYSFDTFTHRKSCL 51 (68)
Q Consensus 2 ~l~aG~V~IN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~ 51 (68)
++++|+|+||+...+...+.+||||+|+||+|+++|.+++++||+.|+++
T Consensus 384 ~l~~G~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k~v~ 433 (434)
T cd07133 384 RTHSGGVTINDTLLHVAQDDLPFGGVGASGMGAYHGKEGFLTFSHAKPVF 433 (434)
T ss_pred hCCcceEEECCcccccCCCCCCcCCCCcccCCCcCCHHHHHHhcccceec
Confidence 68999999998753223467899999999999999999999999999874
No 45
>PLN02315 aldehyde dehydrogenase family 7 member
Probab=99.26 E-value=8.3e-12 Score=87.59 Aligned_cols=52 Identities=21% Similarity=0.234 Sum_probs=45.1
Q ss_pred CeeeeEEEEcCCCCCCCCCCCccccCCCCCCCCcchHHHHHhhhhccEEEEec
Q psy1588 2 RFVEGHSSNNRLISHTPVDTLPFGGVGMSGMGAYHGKYSFDTFTHRKSCLVKD 54 (68)
Q Consensus 2 ~l~aG~V~IN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~~~ 54 (68)
++++|+|+||+.... ..+.+||||+|+||+|+++|.+++++||+.|+++++.
T Consensus 444 ~l~~G~v~iN~~~~~-~~~~~PfGG~k~SG~G~~~G~~~l~~ft~~k~v~~~~ 495 (508)
T PLN02315 444 GSDCGIVNVNIPTNG-AEIGGAFGGEKATGGGREAGSDSWKQYMRRSTCTINY 495 (508)
T ss_pred ccceeEEEEcCCCCC-CCCCCCCCccccccCCccchHHHHHHHhhEEEEEEec
Confidence 589999999986431 3467899999999999999999999999999988763
No 46
>cd07098 ALDH_F15-22 Aldehyde dehydrogenase family 15A1 and 22A1-like. Aldehyde dehydrogenase family members ALDH15A1 (Saccharomyces cerevisiae YHR039C) and ALDH22A1 (Arabidopsis thaliana, EC=1.2.1.3), and similar sequences, are in this CD. Significant improvement of stress tolerance in tobacco plants was observed by overexpressing the ALDH22A1 gene from maize (Zea mays) and was accompanied by a reduction of malondialdehyde derived from cellular lipid peroxidation.
Probab=99.26 E-value=6.6e-12 Score=86.68 Aligned_cols=52 Identities=29% Similarity=0.427 Sum_probs=44.8
Q ss_pred CeeeeEEEEcCCCCCCCCCCCccccCCCCCCCCcchHHHHHhhhhccEEEEe
Q psy1588 2 RFVEGHSSNNRLISHTPVDTLPFGGVGMSGMGAYHGKYSFDTFTHRKSCLVK 53 (68)
Q Consensus 2 ~l~aG~V~IN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~~ 53 (68)
++++|.|+||+...+.....+||||+|.||+|+++|.+++++|++.|+++++
T Consensus 413 ~l~~g~v~iN~~~~~~~~~~~PfgG~k~SG~G~~~g~~~~~~~~~~k~~~~~ 464 (465)
T cd07098 413 QLETGMVAINDFGVNYYVQQLPFGGVKGSGFGRFAGEEGLRGLCNPKSVTED 464 (465)
T ss_pred hCCcceEEECCCCCCCCCCCCCcCccccccCCccChHHHHHHhheeEEEEEe
Confidence 5899999999865322346789999999999999999999999999999775
No 47
>cd07086 ALDH_F7_AASADH-like NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase and related proteins. ALDH subfamily which includes the NAD+-dependent, alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as Antiquitin-1, ALDH7A1, ALDH7B or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), and other similar sequences, such as the uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105).
Probab=99.26 E-value=8.2e-12 Score=86.65 Aligned_cols=50 Identities=22% Similarity=0.266 Sum_probs=44.6
Q ss_pred eeeeEEEEcCCCCCCCCCCCccccCCCCCCCCcchHHHHHhhhhccEEEEe
Q psy1588 3 FVEGHSSNNRLISHTPVDTLPFGGVGMSGMGAYHGKYSFDTFTHRKSCLVK 53 (68)
Q Consensus 3 l~aG~V~IN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~~ 53 (68)
+++|.|+||+...+ ..+.+||||+|+||+|+++|.+++++|++.|+++++
T Consensus 427 ~~~G~v~iN~~~~~-~~~~~PfgG~~~SG~G~~~g~~~~~~f~~~k~i~~~ 476 (478)
T cd07086 427 SDCGIVNVNIPTSG-AEIGGAFGGEKETGGGRESGSDAWKQYMRRSTCTIN 476 (478)
T ss_pred ccceeEEECCCCCC-CCCCCCCCCcccccCCccchHHHHHHhhceEEEEEe
Confidence 89999999987643 346789999999999999999999999999999875
No 48
>cd07119 ALDH_BADH-GbsA Bacillus subtilis NAD+-dependent betaine aldehyde dehydrogenase-like. Included in this CD is the NAD+-dependent, betaine aldehyde dehydrogenase (BADH, GbsA, EC=1.2.1.8) of Bacillus subtilis involved in the synthesis of the osmoprotectant glycine betaine from choline or glycine betaine aldehyde.
Probab=99.26 E-value=7.3e-12 Score=86.86 Aligned_cols=51 Identities=22% Similarity=0.316 Sum_probs=45.4
Q ss_pred CeeeeEEEEcCCCCCCCCCCCccccCCCCCCCCcchHHHHHhhhhccEEEEec
Q psy1588 2 RFVEGHSSNNRLISHTPVDTLPFGGVGMSGMGAYHGKYSFDTFTHRKSCLVKD 54 (68)
Q Consensus 2 ~l~aG~V~IN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~~~ 54 (68)
+|++|.|+||+... ..+.+||||+|+||+|+++|.+++++||+.|+++++.
T Consensus 424 ~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~G~~~l~~~t~~k~v~~~~ 474 (482)
T cd07119 424 RLRAGTVWINDYHP--YFAEAPWGGYKQSGIGRELGPTGLEEYQETKHININL 474 (482)
T ss_pred hcCcceEEECCCCC--CCCCCCcCCcccCcCCccchHHHHHHHhceEEEEEec
Confidence 68999999998644 4567899999999999999999999999999998763
No 49
>cd07100 ALDH_SSADH1_GabD1 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like. Succinate-semialdehyde dehydrogenase 1 (SSADH1, GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde (SSA) to succinate. SSADH activity in Mycobacterium tuberculosis (Mtb) is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731). The Mtb GabD1 SSADH1 reportedly is an enzyme of the gamma-aminobutyrate shunt, which forms a functional link between two TCA half-cycles by converting alpha-ketoglutarate to succinate.
Probab=99.25 E-value=5.6e-12 Score=86.47 Aligned_cols=48 Identities=31% Similarity=0.532 Sum_probs=43.4
Q ss_pred CeeeeEEEEcCCCCCCCCCCCccccCCCCCCCCcchHHHHHhhhhccEEE
Q psy1588 2 RFVEGHSSNNRLISHTPVDTLPFGGVGMSGMGAYHGKYSFDTFTHRKSCL 51 (68)
Q Consensus 2 ~l~aG~V~IN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~ 51 (68)
++++|.|+||+... ..+.+||||+|+||+|+++|.+++++|++.|+++
T Consensus 381 ~l~~g~v~iN~~~~--~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~ 428 (429)
T cd07100 381 RLEAGMVFINGMVK--SDPRLPFGGVKRSGYGRELGRFGIREFVNIKTVW 428 (429)
T ss_pred hCCcCeEEECCCCC--CCCCCCcCCccccccCCcchHHHHHHhcceeEEe
Confidence 68999999998764 4567999999999999999999999999999875
No 50
>cd07091 ALDH_F1-2_Ald2-like ALDH subfamily: ALDH families 1and 2, including 10-formyltetrahydrofolate dehydrogenase, NAD+-dependent retinal dehydrogenase 1 and related proteins. ALDH subfamily which includes the NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36), also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1), in humans, a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1), in humans, a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the co
Probab=99.25 E-value=6e-12 Score=87.15 Aligned_cols=48 Identities=25% Similarity=0.364 Sum_probs=43.3
Q ss_pred CeeeeEEEEcCCCCCCCCCCCccccCCCCCCCCcchHHHHHhhhhccEEE
Q psy1588 2 RFVEGHSSNNRLISHTPVDTLPFGGVGMSGMGAYHGKYSFDTFTHRKSCL 51 (68)
Q Consensus 2 ~l~aG~V~IN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~ 51 (68)
++++|+|+||+... ..+.+||||+|+||+|+++|.+++++|++.|++.
T Consensus 428 ~l~~g~v~iN~~~~--~~~~~pfgG~k~SG~G~~~g~~~~~~f~~~k~~~ 475 (476)
T cd07091 428 ALKAGTVWVNTYNV--FDAAVPFGGFKQSGFGRELGEEGLEEYTQVKAVT 475 (476)
T ss_pred hcCcceEEECCCCC--CCCCCCcCCcccCcCCccchHHHHHHhhceeEEe
Confidence 68999999998654 4568899999999999999999999999999885
No 51
>cd07110 ALDH_F10_BADH Arabidopsis betaine aldehyde dehydrogenase 1 and 2, ALDH family 10A8 and 10A9-like. Present in this CD are the Arabidopsis betaine aldehyde dehydrogenase (BADH) 1 (chloroplast) and 2 (mitochondria), also known as, aldehyde dehydrogenase family 10 member A8 and aldehyde dehydrogenase family 10 member A9, respectively, and are putative dehydration- and salt-inducible BADHs (EC 1.2.1.8) that catalyze the oxidation of betaine aldehyde to the compatible solute glycine betaine.
Probab=99.25 E-value=6.8e-12 Score=86.44 Aligned_cols=48 Identities=23% Similarity=0.319 Sum_probs=43.1
Q ss_pred CeeeeEEEEcCCCCCCCCCCCccccCCCCCCCCcchHHHHHhhhhccEEE
Q psy1588 2 RFVEGHSSNNRLISHTPVDTLPFGGVGMSGMGAYHGKYSFDTFTHRKSCL 51 (68)
Q Consensus 2 ~l~aG~V~IN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~ 51 (68)
++++|.|+||+... ..+.+||||+|+||+|+++|.+++++|++.|+++
T Consensus 408 ~l~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~i~ 455 (456)
T cd07110 408 ALEAGIVWINCSQP--CFPQAPWGGYKRSGIGRELGEWGLDNYLEVKQIT 455 (456)
T ss_pred hCCcceEEECCCCC--CCCCCCCCCcccccCCccchHHHHHHhcceeEEe
Confidence 68999999998754 4567899999999999999999999999999874
No 52
>cd07099 ALDH_DDALDH Methylomonas sp. 4,4'-diapolycopene-dialdehyde dehydrogenase-like. The 4,4'-diapolycopene-dialdehyde dehydrogenase (DDALDH) involved in C30 carotenoid synthesis in Methylomonas sp. strain 16a and other similar sequences are present in this CD. DDALDH converts 4,4'-diapolycopene-dialdehyde into 4,4'-diapolycopene-diacid.
Probab=99.25 E-value=8.1e-12 Score=85.85 Aligned_cols=50 Identities=34% Similarity=0.514 Sum_probs=43.9
Q ss_pred CeeeeEEEEcCCCCCCCCCCCccccCCCCCCCCcchHHHHHhhhhccEEE
Q psy1588 2 RFVEGHSSNNRLISHTPVDTLPFGGVGMSGMGAYHGKYSFDTFTHRKSCL 51 (68)
Q Consensus 2 ~l~aG~V~IN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~ 51 (68)
+|++|.|+||+...+.....+||||+|+||+|+++|.+++++||+.|+++
T Consensus 403 ~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~g~~~g~~~~~~~t~~k~v~ 452 (453)
T cd07099 403 RLEAGAVSINDVLLTAGIPALPFGGVKDSGGGRRHGAEGLREFCRPKAIA 452 (453)
T ss_pred hCCeeeEEECCCCCCCCCCCCCCCCcccccCCccChHHHHHHhcceEEEe
Confidence 68999999998754323568999999999999999999999999999875
No 53
>cd07148 ALDH_RL0313 Uncharacterized ALDH ( RL0313) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1. Uncharacterized aldehyde dehydrogenase (locus RL0313) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD.
Probab=99.24 E-value=6e-12 Score=86.90 Aligned_cols=50 Identities=26% Similarity=0.341 Sum_probs=43.1
Q ss_pred CeeeeEEEEcCCCCCCCCCCCccccCCCCCCCCcchHHHHHhhhhccEEEE
Q psy1588 2 RFVEGHSSNNRLISHTPVDTLPFGGVGMSGMGAYHGKYSFDTFTHRKSCLV 52 (68)
Q Consensus 2 ~l~aG~V~IN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~ 52 (68)
++++|.|+||+... .....+||||+|+||+|+++|.+++++|++.|++++
T Consensus 406 ~~~~g~v~iN~~~~-~~~~~~PfgG~k~SG~G~~~g~~~~~~~~~~k~~~~ 455 (455)
T cd07148 406 RLDATAVMVNDHTA-FRVDWMPFAGRRQSGYGTGGIPYTMHDMTQEKMAVI 455 (455)
T ss_pred HcCcCeEEECCCCC-CCCCCCCCCcchhcccCCCchHHHHHHhhceeEEeC
Confidence 68999999998753 123468999999999999999999999999998853
No 54
>cd07097 ALDH_KGSADH-YcbD Bacillus subtilis NADP+-dependent alpha-ketoglutaric semialdehyde dehydrogenase ycbD-like. Kinetic studies of the Bacillus subtilis ALDH-like ycbD protein, which is involved in d-glucarate/d-galactarate utilization, reveal that it is a NADP+-dependent, alpha-ketoglutaric semialdehyde dehydrogenase (KGSADH). KGSADHs (EC 1.2.1.26) catalyze the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. Interestingly, the NADP+-dependent, tetrameric, 2,5-dioxopentanoate dehydrogenase (EC=1.2.1.26), an enzyme involved in the catabolic pathway for D-arabinose in Sulfolobus solfataricus, also clusters in this group. This CD shows a distant phylogenetic relationship to the Azospirillum brasilense KGSADH-II (-III) group.
Probab=99.24 E-value=6.3e-12 Score=87.05 Aligned_cols=49 Identities=24% Similarity=0.289 Sum_probs=43.1
Q ss_pred CeeeeEEEEcCCCCCCCCCCCccccCCCCCCC-CcchHHHHHhhhhccEEE
Q psy1588 2 RFVEGHSSNNRLISHTPVDTLPFGGVGMSGMG-AYHGKYSFDTFTHRKSCL 51 (68)
Q Consensus 2 ~l~aG~V~IN~~~~~~~~~~~PfGG~k~SG~G-~~~g~~~l~~~t~~k~v~ 51 (68)
+|++|.|+||+...+ ....+||||+|+||+| +++|.+++++|++.|++.
T Consensus 423 ~l~~g~v~iN~~~~~-~~~~~PfGG~~~SG~G~~~~g~~~l~~f~~~k~v~ 472 (473)
T cd07097 423 RVEAGVVMVNLPTAG-VDYHVPFGGRKGSSYGPREQGEAALEFYTTIKTVY 472 (473)
T ss_pred hCCcCeEEECCCCCC-CCCCCCCCCcccccCcccCCcHHHHHHhhceeEEe
Confidence 689999999987542 3457899999999999 899999999999999985
No 55
>cd07109 ALDH_AAS00426 Uncharacterized Saccharopolyspora spinosa aldehyde dehydrogenase (AAS00426)-like. Uncharacterized aldehyde dehydrogenase of Saccharopolyspora spinosa (AAS00426) and other similar sequences, are present in this CD.
Probab=99.24 E-value=7.9e-12 Score=86.09 Aligned_cols=49 Identities=31% Similarity=0.381 Sum_probs=43.3
Q ss_pred CeeeeEEEEcCCCCCCCCCCCccccCCCCCCCCcchHHHHHhhhhccEEE
Q psy1588 2 RFVEGHSSNNRLISHTPVDTLPFGGVGMSGMGAYHGKYSFDTFTHRKSCL 51 (68)
Q Consensus 2 ~l~aG~V~IN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~ 51 (68)
++++|.|+||+...+ ....+||||+|+||+|+++|.+++++|++.|+++
T Consensus 405 ~l~~g~v~iN~~~~~-~~~~~pfgG~k~SG~G~~~g~~~~~~f~~~k~i~ 453 (454)
T cd07109 405 RLRAGQVFVNNYGAG-GGIELPFGGVKKSGHGREKGLEALYNYTQTKTVA 453 (454)
T ss_pred hcCcCeEEECCCCCC-CCCCCCcCCcccCcCCccchHHHHHHHhceeEEe
Confidence 689999999987632 3567899999999999999999999999999875
No 56
>cd07087 ALDH_F3-13-14_CALDH-like ALDH subfamily: Coniferyl aldehyde dehydrogenase, ALDH families 3, 13, and 14, and other related proteins. ALDH subfamily which includes NAD(P)+-dependent, aldehyde dehydrogenase, family 3 member A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and also plant ALDH family members ALDH3F1, ALDH3H1, and ALDH3I1, fungal ALDH14 (YMR110C) and the protozoan family 13 member (ALDH13), as well as coniferyl aldehyde dehydrogenases (CALDH, EC=1.2.1.68), and other similar sequences, such as the Pseudomonas putida benzaldehyde dehydrogenase I that is involved in the metabolism of mandelate.
Probab=99.24 E-value=8.1e-12 Score=85.67 Aligned_cols=50 Identities=54% Similarity=0.897 Sum_probs=42.9
Q ss_pred CeeeeEEEEcCCCCCCCCCCCccccCCCCCCCCcchHHHHHhhhhccEEE
Q psy1588 2 RFVEGHSSNNRLISHTPVDTLPFGGVGMSGMGAYHGKYSFDTFTHRKSCL 51 (68)
Q Consensus 2 ~l~aG~V~IN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~ 51 (68)
++++|+|+||+.......+.+||||+|+||+|+++|.+++++|++.|+++
T Consensus 376 ~l~~g~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~~~ 425 (426)
T cd07087 376 ETSSGGVCVNDVLLHAAIPNLPFGGVGNSGMGAYHGKAGFDTFSHLKSVL 425 (426)
T ss_pred cCCcccEEECCcccccCCCCCCCCCCCcccCCCccCHHHHHHhccceeec
Confidence 68999999998753223467899999999999999999999999999874
No 57
>cd07085 ALDH_F6_MMSDH Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2. Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD.
Probab=99.24 E-value=1.1e-11 Score=86.01 Aligned_cols=51 Identities=25% Similarity=0.339 Sum_probs=43.6
Q ss_pred CeeeeEEEEcCCCCCCCCCCCccccCCCCCCC--CcchHHHHHhhhhccEEEEe
Q psy1588 2 RFVEGHSSNNRLISHTPVDTLPFGGVGMSGMG--AYHGKYSFDTFTHRKSCLVK 53 (68)
Q Consensus 2 ~l~aG~V~IN~~~~~~~~~~~PfGG~k~SG~G--~~~g~~~l~~~t~~k~v~~~ 53 (68)
++++|+|+||+... ...+.+||||+|+||+| +++|.+++++|++.|++++.
T Consensus 425 ~l~~G~v~iN~~~~-~~~~~~PfgG~k~SG~G~~~~~g~~~~~~~~~~k~v~~~ 477 (478)
T cd07085 425 EVDAGMVGINVPIP-VPLAFFSFGGWKGSFFGDLHFYGKDGVRFYTQTKTVTSR 477 (478)
T ss_pred hCCcceEEEcCCCC-CCCCCCCCCCcccccCCCCcCChHHHHHHhcceEEEEEe
Confidence 68999999998753 13357899999999999 57899999999999998764
No 58
>PLN00412 NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Provisional
Probab=99.23 E-value=1e-11 Score=86.76 Aligned_cols=52 Identities=25% Similarity=0.311 Sum_probs=45.4
Q ss_pred CeeeeEEEEcCCCCCCCCCCCccccCCCCCCCCcchHHHHHhhhhccEEEEec
Q psy1588 2 RFVEGHSSNNRLISHTPVDTLPFGGVGMSGMGAYHGKYSFDTFTHRKSCLVKD 54 (68)
Q Consensus 2 ~l~aG~V~IN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~~~ 54 (68)
++++|+|+||+.... ....+||||+|.||+|+++|.+++++||+.|+++++.
T Consensus 437 ~l~~G~v~vN~~~~~-~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k~i~~~~ 488 (496)
T PLN00412 437 AMETGTVQINSAPAR-GPDHFPFQGLKDSGIGSQGITNSINMMTKVKSTVINL 488 (496)
T ss_pred hCCcceEEEcCCCCC-CCCCCCCCCccccccCCCChHHHHHHhcceEEEEEec
Confidence 689999999987531 3357899999999999999999999999999998764
No 59
>cd07149 ALDH_y4uC Uncharacterized ALDH (y4uC) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1. Uncharacterized aldehyde dehydrogenase (ORF name y4uC) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD.
Probab=99.23 E-value=8.3e-12 Score=85.65 Aligned_cols=49 Identities=29% Similarity=0.415 Sum_probs=43.0
Q ss_pred CeeeeEEEEcCCCCCCCCCCCccccCCCCCCCCcchHHHHHhhhhccEEE
Q psy1588 2 RFVEGHSSNNRLISHTPVDTLPFGGVGMSGMGAYHGKYSFDTFTHRKSCL 51 (68)
Q Consensus 2 ~l~aG~V~IN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~ 51 (68)
+|++|.|+||+.... ....+||||+|+||+|+++|.+++++|++.|+++
T Consensus 404 ~l~~g~v~iN~~~~~-~~~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~~~ 452 (453)
T cd07149 404 ELEVGGVMINDSSTF-RVDHMPYGGVKESGTGREGPRYAIEEMTEIKLVC 452 (453)
T ss_pred HcCcCeEEECCCCCC-CCCCCCcCCccccccCCCChHHHHHHhhceeEEe
Confidence 689999999987531 3457899999999999999999999999999875
No 60
>cd07137 ALDH_F3FHI Plant aldehyde dehydrogenase family 3 members F1, H1, and I1 and related proteins. Aldehyde dehydrogenase family members 3F1, 3H1, and 3I1 (ALDH3F1, ALDH3H1, and ALDH3I1), and similar plant sequences, are in this CD. In Arabidopsis thaliana, stress-regulated expression of ALDH3I1 was observed in leaves and osmotic stress expression of ALDH3H1 was observed in root tissue, whereas, ALDH3F1 expression was not stress responsive. Functional analysis of ALDH3I1 suggest it may be involved in a detoxification pathway in plants that limits aldehyde accumulation and oxidative stress.
Probab=99.23 E-value=8.7e-12 Score=85.89 Aligned_cols=50 Identities=52% Similarity=0.947 Sum_probs=43.2
Q ss_pred CeeeeEEEEcCCCCCCCCCCCccccCCCCCCCCcchHHHHHhhhhccEEE
Q psy1588 2 RFVEGHSSNNRLISHTPVDTLPFGGVGMSGMGAYHGKYSFDTFTHRKSCL 51 (68)
Q Consensus 2 ~l~aG~V~IN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~ 51 (68)
++++|.|+||+...+.....+||||+|+||+|+++|.+++++|++.|+++
T Consensus 382 ~l~~G~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~f~~~k~v~ 431 (432)
T cd07137 382 ETSSGGVTFNDTVVQYAIDTLPFGGVGESGFGAYHGKFSFDAFSHKKAVL 431 (432)
T ss_pred hCCcCcEEECCccccccCCCCCCCCcCcCcCCccccHHHHHHhccCceee
Confidence 68999999998754223367899999999999999999999999999875
No 61
>cd07118 ALDH_SNDH Gluconobacter oxydans L-sorbosone dehydrogenase-like. Included in this CD is the L-sorbosone dehydrogenase (SNDH) from Gluconobacter oxydans UV10. In G. oxydans, D-sorbitol is converted to 2-keto-L-gulonate (a precursor of L-ascorbic acid) in sequential oxidation steps catalyzed by a FAD-dependent, L-sorbose dehydrogenase and an NAD(P)+-dependent, L-sorbosone dehydrogenase.
Probab=99.23 E-value=8.9e-12 Score=86.03 Aligned_cols=48 Identities=31% Similarity=0.558 Sum_probs=43.5
Q ss_pred CeeeeEEEEcCCCCCCCCCCCccccCCCCCCCCcchHHHHHhhhhccEEE
Q psy1588 2 RFVEGHSSNNRLISHTPVDTLPFGGVGMSGMGAYHGKYSFDTFTHRKSCL 51 (68)
Q Consensus 2 ~l~aG~V~IN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~ 51 (68)
+|++|.|+||+... ..+.+||||+|+||+|+++|.+++++|++.|+++
T Consensus 406 ~l~~g~v~iN~~~~--~~~~~PfgG~~~SG~G~~~g~~~l~~~t~~k~~~ 453 (454)
T cd07118 406 RIRAGTVWVNTFLD--GSPELPFGGFKQSGIGRELGRYGVEEYTELKTVH 453 (454)
T ss_pred hcCcCEEEECCCCC--CCCCCCcCCcccccCCcCchHHHHHHHhceeEEe
Confidence 68999999998765 4567899999999999999999999999999875
No 62
>cd07131 ALDH_AldH-CAJ73105 Uncharacterized Candidatus kuenenia aldehyde dehydrogenase AldH (CAJ73105)-like. Uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105) and similar sequences with similarity to alpha-aminoadipic semialdehyde dehydrogenase (AASADH, human ALDH7A1, EC=1.2.1.31), Arabidopsis ALDH7B4, and Streptomyces clavuligerus delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH) are included in this CD.
Probab=99.23 E-value=1.3e-11 Score=85.45 Aligned_cols=51 Identities=33% Similarity=0.429 Sum_probs=44.8
Q ss_pred CeeeeEEEEcCCCCCCCCCCCccccCCCCCCC-CcchHHHHHhhhhccEEEEe
Q psy1588 2 RFVEGHSSNNRLISHTPVDTLPFGGVGMSGMG-AYHGKYSFDTFTHRKSCLVK 53 (68)
Q Consensus 2 ~l~aG~V~IN~~~~~~~~~~~PfGG~k~SG~G-~~~g~~~l~~~t~~k~v~~~ 53 (68)
++++|+|+||+...+ ..+.+||||+|+||+| +++|.+++++|++.|+++++
T Consensus 425 ~l~~G~v~iN~~~~~-~~~~~pfgG~k~SG~G~~~~g~~~~~~f~~~k~i~~~ 476 (478)
T cd07131 425 DLEAGITYVNAPTIG-AEVHLPFGGVKKSGNGHREAGTTALDAFTEWKAVYVD 476 (478)
T ss_pred hcCccEEEECCCCCC-CCCCCCCCCcccccCCCcCCcHHHHHHhhheEEEEEe
Confidence 689999999987653 3467999999999999 88899999999999999875
No 63
>cd07130 ALDH_F7_AASADH NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase, ALDH family members 7A1 and 7B. Alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as ALDH7A1, Antiquitin-1, ALDH7B, or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), is a NAD+-dependent ALDH. Human ALDH7A1 is involved in the pipecolic acid pathway of lysine catabolism, catalyzing the oxidation of alpha-aminoadipic semialdehyde to alpha-aminoadipate. Arabidopsis thaliana ALDH7B4 appears to be an osmotic-stress-inducible ALDH gene encoding a turgor-responsive or stress-inducible ALDH. The Streptomyces clavuligerus P6CDH appears to be involved in cephamycin biosynthesis, catalyzing the second stage of the two-step conversion of lysine to alpha-aminoadipic acid. The ALDH7A1 enzyme and others in this group have been observed as tetramers, yet the bacterial P6CDH enzyme has been reported as a monomer.
Probab=99.22 E-value=1.8e-11 Score=84.99 Aligned_cols=51 Identities=22% Similarity=0.240 Sum_probs=44.0
Q ss_pred CeeeeEEEEcCCCCCCCCCCCccccCCCCCCCCcchHHHHHhhhhccEEEEe
Q psy1588 2 RFVEGHSSNNRLISHTPVDTLPFGGVGMSGMGAYHGKYSFDTFTHRKSCLVK 53 (68)
Q Consensus 2 ~l~aG~V~IN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~~ 53 (68)
++++|+|+||..... ..+.+||||+|+||+|+++|.+++++|++.|++.++
T Consensus 422 ~~~~g~v~iN~~~~~-~~~~~PfgG~k~SG~G~~~g~~~~~~f~~~k~~~~~ 472 (474)
T cd07130 422 GSDCGIVNVNIGTSG-AEIGGAFGGEKETGGGRESGSDAWKQYMRRSTCTIN 472 (474)
T ss_pred CcceEEEEEcCCCCC-CCCCCCcCccccccCCccchHHHHHHHhheEEEEEe
Confidence 489999999985431 346789999999999999999999999999998765
No 64
>PLN02419 methylmalonate-semialdehyde dehydrogenase [acylating]
Probab=99.22 E-value=2.2e-11 Score=87.21 Aligned_cols=53 Identities=30% Similarity=0.346 Sum_probs=45.8
Q ss_pred CCeeeeEEEEcCCCCCCCCCCCccccCCCCCCC--CcchHHHHHhhhhccEEEEec
Q psy1588 1 MRFVEGHSSNNRLISHTPVDTLPFGGVGMSGMG--AYHGKYSFDTFTHRKSCLVKD 54 (68)
Q Consensus 1 ~~l~aG~V~IN~~~~~~~~~~~PfGG~k~SG~G--~~~g~~~l~~~t~~k~v~~~~ 54 (68)
.+|++|+|+||+... ...+.+||||+|+||+| +++|.+++++|++.|+++++.
T Consensus 536 ~~l~aG~V~IN~~~~-~~~~~~PFGG~k~SG~G~~~~~G~~gl~~ft~~K~v~~~~ 590 (604)
T PLN02419 536 MDIEAGQIGINVPIP-VPLPFFSFTGNKASFAGDLNFYGKAGVDFFTQIKLVTQKQ 590 (604)
T ss_pred HhCCeeeEEEcCCCC-CCCCCCCcCCcCcCCCCCCcccHHHHHHHhhCeEEEEEcc
Confidence 368999999998743 13467899999999999 789999999999999998875
No 65
>cd07150 ALDH_VaniDH_like Pseudomonas putida vanillin dehydrogenase-like. Vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid and other related sequences are included in this CD. The E. coli vanillin dehydrogenase (LigV) preferred NAD+ to NADP+ and exhibited a broad substrate preference, including vanillin, benzaldehyde, protocatechualdehyde, m-anisaldehyde, and p-hydroxybenzaldehyde.
Probab=99.22 E-value=9.3e-12 Score=85.53 Aligned_cols=49 Identities=33% Similarity=0.457 Sum_probs=43.5
Q ss_pred CeeeeEEEEcCCCCCCCCCCCccccCCCCCCCCcchHHHHHhhhhccEEE
Q psy1588 2 RFVEGHSSNNRLISHTPVDTLPFGGVGMSGMGAYHGKYSFDTFTHRKSCL 51 (68)
Q Consensus 2 ~l~aG~V~IN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~ 51 (68)
++++|.|+||+...+ ..+.+||||+|.||+|+++|.+++++|++.|+++
T Consensus 402 ~l~~G~v~iN~~~~~-~~~~~pfgG~~~SG~G~~~g~~~l~~~~~~k~v~ 450 (451)
T cd07150 402 RLESGMVHINDPTIL-DEAHVPFGGVKASGFGREGGEWSMEEFTELKWIT 450 (451)
T ss_pred hcCcCEEEECCCCCC-CCCCCCcCCccccccCcCCcHHHHHHhheeeEEe
Confidence 689999999998653 3467899999999999999999999999999875
No 66
>cd07092 ALDH_ABALDH-YdcW Escherichia coli NAD+-dependent gamma-aminobutyraldehyde dehydrogenase YdcW-like. NAD+-dependent, tetrameric, gamma-aminobutyraldehyde dehydrogenase (ABALDH), YdcW of Escherichia coli K12, catalyzes the oxidation of gamma-aminobutyraldehyde to gamma-aminobutyric acid. ABALDH can also oxidize n-alkyl medium-chain aldehydes, but with a lower catalytic efficiency.
Probab=99.22 E-value=1e-11 Score=85.26 Aligned_cols=48 Identities=27% Similarity=0.406 Sum_probs=43.3
Q ss_pred CeeeeEEEEcCCCCCCCCCCCccccCCCCCCCCcchHHHHHhhhhccEEE
Q psy1588 2 RFVEGHSSNNRLISHTPVDTLPFGGVGMSGMGAYHGKYSFDTFTHRKSCL 51 (68)
Q Consensus 2 ~l~aG~V~IN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~ 51 (68)
++++|.|+||+... ..+.+||||+|+||+|+++|.+++++|++.|+++
T Consensus 402 ~l~~g~v~iN~~~~--~~~~~PfgG~~~SG~G~~~g~~~~~~~~~~k~~~ 449 (450)
T cd07092 402 RLDFGTVWVNTHIP--LAAEMPHGGFKQSGYGKDLSIYALEDYTRIKHVM 449 (450)
T ss_pred hcCccEEEECCCCC--CCCCCCcCCcccCcCCCCChHHHHHHHheeeEEe
Confidence 68999999998765 4567999999999999999999999999999885
No 67
>cd07134 ALDH_AlkH-like Pseudomonas putida Aldehyde dehydrogenase AlkH-like. Aldehyde dehydrogenase AlkH (locus name P12693, EC=1.2.1.3) of the alkBFGHJKL operon that allows Pseudomonas putida to metabolize alkanes and the aldehyde dehydrogenase AldX of Bacillus subtilis (locus P46329, EC=1.2.1.3), and similar sequences, are present in this CD.
Probab=99.22 E-value=1.3e-11 Score=84.98 Aligned_cols=50 Identities=42% Similarity=0.788 Sum_probs=43.0
Q ss_pred CeeeeEEEEcCCCCCCCCCCCccccCCCCCCCCcchHHHHHhhhhccEEE
Q psy1588 2 RFVEGHSSNNRLISHTPVDTLPFGGVGMSGMGAYHGKYSFDTFTHRKSCL 51 (68)
Q Consensus 2 ~l~aG~V~IN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~ 51 (68)
++++|.|+||+.......+.+||||+|+||+|+++|.+++++||+.|++.
T Consensus 383 ~l~~g~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~i~ 432 (433)
T cd07134 383 RTSSGGVVVNDVVLHFLNPNLPFGGVNNSGIGSYHGVYGFKAFSHERAVL 432 (433)
T ss_pred hCCcceEEECCcccccCCCCCCCCCcCcccCCCcCcHHHHHHhcccceee
Confidence 68999999998653223467899999999999999999999999999874
No 68
>TIGR01236 D1pyr5carbox1 delta-1-pyrroline-5-carboxylate dehydrogenase, group 1. This model represents one of two related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. The two branches are not as closely related to each other as some aldehyde dehydrogenases are to this branch, and separate models are built for this reason. The enzyme is the second of two in the degradation of proline to glutamate.
Probab=99.22 E-value=1.8e-11 Score=86.37 Aligned_cols=51 Identities=24% Similarity=0.220 Sum_probs=43.5
Q ss_pred eeeEEEEcCCCCCCCCCCCccccCCCCCCC-CcchHHHHHhhhhccEEEEec
Q psy1588 4 VEGHSSNNRLISHTPVDTLPFGGVGMSGMG-AYHGKYSFDTFTHRKSCLVKD 54 (68)
Q Consensus 4 ~aG~V~IN~~~~~~~~~~~PfGG~k~SG~G-~~~g~~~l~~~t~~k~v~~~~ 54 (68)
++|+|+||+...+...+.+||||+|.||+| +++|.+++++|++.|++....
T Consensus 470 ~~G~v~IN~~~~~~~~~~~PfGG~k~SG~G~~~~g~~~l~~f~~~k~v~~~~ 521 (533)
T TIGR01236 470 AAGNFYINDKPTGAVVGQQPFGGARGSGTNDKAGGPLNLLRWTSARSIKETF 521 (533)
T ss_pred cCcEEEECCCCCCCCCCCCCCCCcccccCCcccCCHHHHHHhcceEEEEEEc
Confidence 499999998654323357899999999998 899999999999999988775
No 69
>TIGR03250 PhnAcAld_DH putative phosphonoacetaldehyde dehydrogenase. It seems reasonably certain then, that this enzyme catalyzes the NAD-dependent oxidation of phosphonoacetaldehyde to phosphonoacetate, bridging the metabolic gap between PhnW and PhnA. We propose the name phosphonoacetaldehyde dehydrogenase and the gene symbol PhnY for this enzyme.
Probab=99.21 E-value=1.5e-11 Score=85.38 Aligned_cols=51 Identities=22% Similarity=0.333 Sum_probs=42.8
Q ss_pred CeeeeEEEEcCCCCCCCCCCCccccCCCCCCC-CcchHHHHHhhhhccEEEEe
Q psy1588 2 RFVEGHSSNNRLISHTPVDTLPFGGVGMSGMG-AYHGKYSFDTFTHRKSCLVK 53 (68)
Q Consensus 2 ~l~aG~V~IN~~~~~~~~~~~PfGG~k~SG~G-~~~g~~~l~~~t~~k~v~~~ 53 (68)
+|++|+|+||+.... ....+||||+|+||+| ++++.+++++|++.|+++++
T Consensus 420 ~l~~G~v~iN~~~~~-~~~~~PfGG~k~SG~G~~~g~~~~l~~ft~~k~i~~~ 471 (472)
T TIGR03250 420 ELQVGTVNVWEVPGY-RLELTPFGGIKDSGLGYKEGVQEAMKSFTNLKTYSLP 471 (472)
T ss_pred HCCcceEEEcCCCCC-CCCCCCCCccccccCCCCCChHHHHHHhhceEEEEEe
Confidence 689999999986532 2345899999999999 56778999999999998764
No 70
>cd07135 ALDH_F14-YMR110C Saccharomyces cerevisiae aldehyde dehydrogenase family 14 and related proteins. Aldehyde dehydrogenase family 14 (ALDH14), isolated mainly from the mitochondrial outer membrane of Saccharomyces cerevisiae (YMR110C) and most closely related to the plant and animal ALDHs and fatty ALDHs family 3 members, and similar fungal sequences, are present in this CD.
Probab=99.21 E-value=1e-11 Score=85.63 Aligned_cols=50 Identities=54% Similarity=0.909 Sum_probs=42.9
Q ss_pred CeeeeEEEEcCCCCCCCCCCCccccCCCCCCCCcchHHHHHhhhhccEEE
Q psy1588 2 RFVEGHSSNNRLISHTPVDTLPFGGVGMSGMGAYHGKYSFDTFTHRKSCL 51 (68)
Q Consensus 2 ~l~aG~V~IN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~ 51 (68)
+|++|.|+||+...+...+.+||||+|+||+|+++|.+++++|++.|++.
T Consensus 386 ~l~~g~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~i~ 435 (436)
T cd07135 386 RTRSGGVVINDTLIHVGVDNAPFGGVGDSGYGAYHGKYGFDTFTHERTVV 435 (436)
T ss_pred cCCcCeEEECCccccccCCCCCcCCcCcccCCccccHhHHHHhccccccc
Confidence 68999999998654223467899999999999999999999999999863
No 71
>cd07115 ALDH_HMSADH_HapE Pseudomonas fluorescens 4-hydroxymuconic semialdehyde dehydrogenase-like. 4-hydroxymuconic semialdehyde dehydrogenase (HapE, EC=1.2.1.61) of Pseudomonas fluorescens ACB involved in 4-hydroxyacetophenone degradation, and putative hydroxycaproate semialdehyde dehydrogenase (ChnE) of Brachymonas petroleovorans involved in cyclohexane metabolism, and other similar sequences, are present in this CD.
Probab=99.21 E-value=1.8e-11 Score=84.27 Aligned_cols=50 Identities=30% Similarity=0.369 Sum_probs=44.4
Q ss_pred CeeeeEEEEcCCCCCCCCCCCccccCCCCCCCCcchHHHHHhhhhccEEEEe
Q psy1588 2 RFVEGHSSNNRLISHTPVDTLPFGGVGMSGMGAYHGKYSFDTFTHRKSCLVK 53 (68)
Q Consensus 2 ~l~aG~V~IN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~~ 53 (68)
+|++|.|+||+... ..+.+||||+|+||+|+++|.+++++|++.|+++++
T Consensus 403 ~l~~G~v~iN~~~~--~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~~~~~ 452 (453)
T cd07115 403 ALKAGTVWINTYNR--FDPGSPFGGYKQSGFGREMGREALDEYTEVKSVWVN 452 (453)
T ss_pred hcCccEEEECCCCC--CCCCCCCCCcccccCCcCchHHHHHHhhceEEEEEe
Confidence 58999999998643 456789999999999999999999999999998764
No 72
>cd07104 ALDH_BenzADH-like ALDH subfamily: NAD(P)+-dependent benzaldehyde dehydrogenase II, vanillin dehydrogenase, p-hydroxybenzaldehyde dehydrogenase and related proteins. ALDH subfamily which includes the NAD(P)+-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) involved in the oxidation of benzyl alcohol to benzoate; p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes the oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid; vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid as seen in Pseudomonas putida KT2440; and other related sequences.
Probab=99.21 E-value=1.2e-11 Score=84.35 Aligned_cols=49 Identities=31% Similarity=0.442 Sum_probs=43.6
Q ss_pred CeeeeEEEEcCCCCCCCCCCCccccCCCCCCCCcchHHHHHhhhhccEEE
Q psy1588 2 RFVEGHSSNNRLISHTPVDTLPFGGVGMSGMGAYHGKYSFDTFTHRKSCL 51 (68)
Q Consensus 2 ~l~aG~V~IN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~ 51 (68)
++++|.|+||+...+ ..+.+||||+|.||+|+++|.+++++|++.|+++
T Consensus 382 ~l~~g~v~iN~~~~~-~~~~~pfgG~~~SG~g~~~g~~~l~~~~~~k~~~ 430 (431)
T cd07104 382 RLETGMVHINDQTVN-DEPHVPFGGVKASGGGRFGGPASLEEFTEWQWIT 430 (431)
T ss_pred hcCcCeEEECCCCCC-CCCCCCCCCcccccCCccchHHHHHHhhceeEEe
Confidence 689999999998753 2467899999999999999999999999999875
No 73
>PRK09407 gabD2 succinic semialdehyde dehydrogenase; Reviewed
Probab=99.21 E-value=1.5e-11 Score=86.32 Aligned_cols=53 Identities=23% Similarity=0.318 Sum_probs=45.3
Q ss_pred CeeeeEEEEcCCCCC-CCCCCCccccCCCCCCCCcchHHHHHhhhhccEEEEec
Q psy1588 2 RFVEGHSSNNRLISH-TPVDTLPFGGVGMSGMGAYHGKYSFDTFTHRKSCLVKD 54 (68)
Q Consensus 2 ~l~aG~V~IN~~~~~-~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~~~ 54 (68)
+|++|.|+||+...+ ...+.+||||+|+||+|+++|.+++++|++.|++++..
T Consensus 439 ~l~~G~v~IN~~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~ft~~k~v~~~~ 492 (524)
T PRK09407 439 RIRAGTVNVNEGYAAAWGSVDAPMGGMKDSGLGRRHGAEGLLKYTESQTIATQR 492 (524)
T ss_pred hCCcceEEECCCCCcCcCCCCCCCCCccccccCccchHHHHHHhCCeEEEEEcc
Confidence 689999999986532 12346899999999999999999999999999998875
No 74
>cd07139 ALDH_AldA-Rv0768 Mycobacterium tuberculosis aldehyde dehydrogenase AldA-like. The Mycobacterium tuberculosis NAD+-dependent, aldehyde dehydrogenase PDB structure, 3B4W, and the Mycobacterium tuberculosis H37Rv aldehyde dehydrogenase AldA (locus Rv0768) sequence, as well as the Rhodococcus rhodochrous ALDH involved in haloalkane catabolism, and other similar sequences, are included in this CD.
Probab=99.20 E-value=1.4e-11 Score=85.24 Aligned_cols=47 Identities=30% Similarity=0.397 Sum_probs=42.4
Q ss_pred CeeeeEEEEcCCCCCCCCCCCccccCCCCCCCCcchHHHHHhhhhccEEE
Q psy1588 2 RFVEGHSSNNRLISHTPVDTLPFGGVGMSGMGAYHGKYSFDTFTHRKSCL 51 (68)
Q Consensus 2 ~l~aG~V~IN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~ 51 (68)
++++|.|+||+.. ..+.+||||+|.||+|+++|.+++++||+.|+++
T Consensus 424 ~l~~G~v~iN~~~---~~~~~PfgG~k~SG~G~~~g~~~~~~ft~~k~i~ 470 (471)
T cd07139 424 RIRTGTVGVNGFR---LDFGAPFGGFKQSGIGREGGPEGLDAYLETKSIY 470 (471)
T ss_pred hCCcceEEECCCC---CCCCCCCCCcccccCCccchHHHHHHHhceeEEe
Confidence 5899999999864 3467999999999999999999999999999985
No 75
>cd07111 ALDH_F16 Aldehyde dehydrogenase family 16A1-like. Uncharacterized aldehyde dehydrogenase family 16 member A1 (ALDH16A1) and other related sequences are present in this CD. The active site cysteine and glutamate residues are not conserved in the human ALDH16A1 protein sequence.
Probab=99.20 E-value=1.4e-11 Score=85.78 Aligned_cols=46 Identities=22% Similarity=0.145 Sum_probs=41.3
Q ss_pred CeeeeEEEEcCCCCCCCCCCCccccCCCCCCCCcchHHHHHhhhhccE
Q psy1588 2 RFVEGHSSNNRLISHTPVDTLPFGGVGMSGMGAYHGKYSFDTFTHRKS 49 (68)
Q Consensus 2 ~l~aG~V~IN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~ 49 (68)
++++|.|+||+... ..+.+||||+|+||+|+++|.+++++||+.|+
T Consensus 432 ~l~aG~v~iN~~~~--~~~~~PfGG~k~SG~G~~~g~~~~~~~~~~k~ 477 (480)
T cd07111 432 SLKAGVVWINGHNL--FDAAAGFGGYRESGFGREGGKEGLYEYLRPSW 477 (480)
T ss_pred hCCEeeEEECCCCC--CCCCCCcCCcccccCCccchHHHHHHHhhccC
Confidence 68999999998754 45678999999999999999999999999885
No 76
>cd07145 ALDH_LactADH_F420-Bios Methanocaldococcus jannaschii NAD+-dependent lactaldehyde dehydrogenase-like. NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) involved the biosynthesis of coenzyme F(420) in Methanocaldococcus jannaschii through the oxidation of lactaldehyde to lactate and generation of NAPH, and similar sequences are included in this CD.
Probab=99.20 E-value=1.6e-11 Score=84.65 Aligned_cols=50 Identities=28% Similarity=0.422 Sum_probs=43.1
Q ss_pred CeeeeEEEEcCCCCCCCCCCCccccCCCCCCCCcchHHHHHhhhhccEEEE
Q psy1588 2 RFVEGHSSNNRLISHTPVDTLPFGGVGMSGMGAYHGKYSFDTFTHRKSCLV 52 (68)
Q Consensus 2 ~l~aG~V~IN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~ 52 (68)
++++|.|+||+... .....+||||+|+||+|+++|.+++++|++.|++.+
T Consensus 407 ~~~~g~v~vN~~~~-~~~~~~pfgG~~~SG~G~~~g~~~l~~f~~~k~v~~ 456 (456)
T cd07145 407 ELEAGGVVINDSTR-FRWDNLPFGGFKKSGIGREGVRYTMLEMTEEKTIVI 456 (456)
T ss_pred hCCcceEEECCCCC-CCCCCCCCCCcccccCCcCchHHHHHHhhceeEEeC
Confidence 57899999998653 123578999999999999999999999999998853
No 77
>TIGR01237 D1pyr5carbox2 delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative. This enzyme is the second of two in the degradation of proline to glutamate. This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch may be associated with proline dehydrogenase (the other enzyme of the pathway from proline to glutamate) but have not been demonstrated experimentally. The branches are not as closely related to each other as some distinct aldehyde dehydrogenases are to some; separate models were built to let each model describe a set of equivalogs.
Probab=99.20 E-value=2.5e-11 Score=85.04 Aligned_cols=52 Identities=31% Similarity=0.389 Sum_probs=43.7
Q ss_pred CeeeeEEEEcCCCCCCCCCCCccccCCCCCCCC-cchHHHHHhhhhccEEEEe
Q psy1588 2 RFVEGHSSNNRLISHTPVDTLPFGGVGMSGMGA-YHGKYSFDTFTHRKSCLVK 53 (68)
Q Consensus 2 ~l~aG~V~IN~~~~~~~~~~~PfGG~k~SG~G~-~~g~~~l~~~t~~k~v~~~ 53 (68)
++++|.|+||+...+.....+||||+|+||+|+ ++|.+++++||+.|+++.+
T Consensus 458 ~l~~G~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~~g~~~l~~~~~~k~v~~~ 510 (511)
T TIGR01237 458 EFEVGNLYFNRTITGAIVGRQPFGGFKMSGTDSKAGGPDYLLQFMQPKTVTEN 510 (511)
T ss_pred hCCcceEEECCCCCCCCCCCCCCCccccccCCCcCCCHHHHHHhcceEEEEEe
Confidence 689999999987543223468999999999995 7899999999999998764
No 78
>TIGR01780 SSADH succinate-semialdehyde dehydrogenase. SSADH enzyme belongs to the aldehyde dehydrogenase family (pfam00171), sharing a common evolutionary origin and enzymatic mechanism with lactaldehyde dehydrogenase. Like in lactaldehyde dehydrogenase and succinate semialdehyde dehydrogenase, the mammalian catalytic glutamic acid and cysteine residues are conserved in all the enzymes of this family (PS00687, PS00070).
Probab=99.19 E-value=1.6e-11 Score=84.59 Aligned_cols=45 Identities=29% Similarity=0.432 Sum_probs=40.3
Q ss_pred CeeeeEEEEcCCCCCCCCCCCccccCCCCCCCCcchHHHHHhhhhcc
Q psy1588 2 RFVEGHSSNNRLISHTPVDTLPFGGVGMSGMGAYHGKYSFDTFTHRK 48 (68)
Q Consensus 2 ~l~aG~V~IN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k 48 (68)
+|++|.|+||+... ..+.+||||+|+||+|+++|.+++++|++.|
T Consensus 404 ~l~~G~v~iN~~~~--~~~~~pfGG~k~SG~G~~~g~~~~~~~~~~k 448 (448)
T TIGR01780 404 ALEYGMVGINTGLI--SNVVAPFGGVKQSGLGREGSKYGIEEYLETK 448 (448)
T ss_pred hCCccEEEECCCCC--CCCCCCCCCcccccCCccchHHHHHHHhccC
Confidence 68999999998754 4567899999999999999999999999875
No 79
>cd07105 ALDH_SaliADH Salicylaldehyde dehydrogenase, DoxF-like. Salicylaldehyde dehydrogenase (DoxF, SaliADH, EC=1.2.1.65) involved in the upper naphthalene catabolic pathway of Pseudomonas strain C18 and other similar sequences are present in this CD.
Probab=99.19 E-value=1.7e-11 Score=84.03 Aligned_cols=50 Identities=38% Similarity=0.612 Sum_probs=44.0
Q ss_pred CeeeeEEEEcCCCCCCCCCCCccccCCCCCCCCcchHHHHHhhhhccEEEE
Q psy1588 2 RFVEGHSSNNRLISHTPVDTLPFGGVGMSGMGAYHGKYSFDTFTHRKSCLV 52 (68)
Q Consensus 2 ~l~aG~V~IN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~ 52 (68)
++++|.|+||++..+ ..+.+||||+|+||+|+++|.+++++|++.|++++
T Consensus 383 ~l~~g~v~vN~~~~~-~~~~~PfgG~~~SG~G~~~g~~~l~~~~~~k~v~~ 432 (432)
T cd07105 383 RIESGAVHINGMTVH-DEPTLPHGGVKSSGYGRFNGKWGIDEFTETKWITI 432 (432)
T ss_pred hCCcCeEEECCCCCC-CCCCCCCCCcccccccccChHHHHHHhhceEEEeC
Confidence 589999999987653 34678999999999999999999999999998863
No 80
>cd07152 ALDH_BenzADH NAD-dependent benzaldehyde dehydrogenase II-like. NAD-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) is involved in the oxidation of benzyl alcohol to benzoate. In Acinetobacter calcoaceticus, this process is carried out by the chromosomally encoded, benzyl alcohol dehydrogenase (xylB) and benzaldehyde dehydrogenase II (xylC) enzymes; whereas in Pseudomonas putida they are encoded by TOL plasmids.
Probab=99.19 E-value=1.8e-11 Score=84.10 Aligned_cols=49 Identities=29% Similarity=0.465 Sum_probs=42.9
Q ss_pred CeeeeEEEEcCCCCCCCCCCCccccCCCCCCC-CcchHHHHHhhhhccEEE
Q psy1588 2 RFVEGHSSNNRLISHTPVDTLPFGGVGMSGMG-AYHGKYSFDTFTHRKSCL 51 (68)
Q Consensus 2 ~l~aG~V~IN~~~~~~~~~~~PfGG~k~SG~G-~~~g~~~l~~~t~~k~v~ 51 (68)
+|++|.|+||+...+ ..+.+||||+|+||+| +++|.+++++|++.|+++
T Consensus 393 ~l~~G~v~iN~~~~~-~~~~~pfGG~~~SG~G~~~~g~~~l~~~~~~k~~~ 442 (443)
T cd07152 393 RLRTGMLHINDQTVN-DEPHNPFGGMGASGNGSRFGGPANWEEFTQWQWVT 442 (443)
T ss_pred hCCcCeEEECCCCCC-CCCCCCCCCcccccCCCccCcHHHHHHhhceeEEe
Confidence 689999999987653 2357999999999999 888999999999999875
No 81
>cd07089 ALDH_CddD-AldA-like Rhodococcus ruber 6-oxolauric acid dehydrogenase-like and related proteins. The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid; and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and also, the Mycobacterium tuberculosis H37Rv ALDH AldA (locus Rv0768) sequence; and other similar sequences, are included in this CD.
Probab=99.19 E-value=2e-11 Score=84.43 Aligned_cols=48 Identities=29% Similarity=0.342 Sum_probs=43.3
Q ss_pred CeeeeEEEEcCCCCCCCCCCCccccCCCCCCCCcchHHHHHhhhhccEEE
Q psy1588 2 RFVEGHSSNNRLISHTPVDTLPFGGVGMSGMGAYHGKYSFDTFTHRKSCL 51 (68)
Q Consensus 2 ~l~aG~V~IN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~ 51 (68)
++++|.|+||+... ..+.+||||+|+||+|+++|.+++++|++.|+++
T Consensus 411 ~~~~G~v~iN~~~~--~~~~~PfgG~k~SG~G~~~g~~~l~~ft~~k~v~ 458 (459)
T cd07089 411 RIRTGSVGINGGGG--YGPDAPFGGYKQSGLGRENGIEGLEEFLETKSIA 458 (459)
T ss_pred hcCcCeEEECCCCC--CCCCCCcCCcccccCCCCchHHHHHHhhceeEEe
Confidence 58999999998764 4567899999999999999999999999999875
No 82
>cd07088 ALDH_LactADH-AldA Escherichia coli lactaldehyde dehydrogenase AldA-like. Lactaldehyde dehydrogenase from Escherichia coli (AldA, LactADH, EC=1.2.1.22), an NAD(+)-dependent enzyme involved in the metabolism of L-fucose and L-rhamnose, and other similar sequences are present in this CD.
Probab=99.19 E-value=2e-11 Score=84.29 Aligned_cols=48 Identities=21% Similarity=0.191 Sum_probs=42.7
Q ss_pred CeeeeEEEEcCCCCCCCCCCCccccCCCCCCCCcchHHHHHhhhhccEEE
Q psy1588 2 RFVEGHSSNNRLISHTPVDTLPFGGVGMSGMGAYHGKYSFDTFTHRKSCL 51 (68)
Q Consensus 2 ~l~aG~V~IN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~ 51 (68)
++++|.|+||+... .....||||+|+||+|+++|.+++++||+.|++.
T Consensus 420 ~l~~g~v~iN~~~~--~~~~~p~gG~k~SG~G~~~g~~~l~~~t~~k~v~ 467 (468)
T cd07088 420 ELEFGETYINRENF--EAMQGFHAGWKKSGLGGADGKHGLEEYLQTKVVY 467 (468)
T ss_pred hCCcceEEECCCCC--CCCCCCcCCcccccCCcCchHHHHHHHhceeEEe
Confidence 68999999998765 3455799999999999999999999999999885
No 83
>cd07093 ALDH_F8_HMSADH Human aldehyde dehydrogenase family 8 member A1-like. In humans, the aldehyde dehydrogenase family 8 member A1 (ALDH8A1) protein functions to convert 9-cis-retinal to 9-cis-retinoic acid and has a preference for NAD+. Also included in this CD is the 2-hydroxymuconic semialdehyde dehydrogenase (HMSADH) which catalyzes the conversion of 2-hydroxymuconic semialdehyde to 4-oxalocrotonate, a step in the meta cleavage pathway of aromatic hydrocarbons in bacteria. Such HMSADHs seen here are: XylG of the TOL plasmid pWW0 of Pseudomonas putida, TomC of Burkholderia cepacia G4, and AphC of Comamonas testosterone.
Probab=99.18 E-value=2.4e-11 Score=83.59 Aligned_cols=48 Identities=33% Similarity=0.477 Sum_probs=43.2
Q ss_pred CeeeeEEEEcCCCCCCCCCCCccccCCCCCCCCcchHHHHHhhhhccEEE
Q psy1588 2 RFVEGHSSNNRLISHTPVDTLPFGGVGMSGMGAYHGKYSFDTFTHRKSCL 51 (68)
Q Consensus 2 ~l~aG~V~IN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~ 51 (68)
++++|.|+||+... ....+||||+|+||+|+++|.+++++|++.|+++
T Consensus 407 ~l~~g~v~iN~~~~--~~~~~pfgG~~~SG~G~~~g~~~~~~~~~~k~~~ 454 (455)
T cd07093 407 RLEAGTVWVNCWLV--RDLRTPFGGVKASGIGREGGDYSLEFYTELKNVC 454 (455)
T ss_pred hCCcceEEECCCCC--CCCCCCcCCCccCcCCCCchHHHHHHHhceeEEe
Confidence 58999999999865 3467899999999999999999999999999875
No 84
>TIGR01722 MMSDH methylmalonic acid semialdehyde dehydrogenase. In Bacillus, a highly homologous protein to methylmalonic acid semialdehyde dehydrogenase, groups out from the main MMSDH clade with Listeria and Sulfolobus. This Bacillus protein has been suggested to be located in an iol operon and/or involved in myo-inositol catabolism, converting malonic semialdehyde to acetyl CoA ad CO2. The preceeding enzymes responsible for valine catabolism are present in Bacillus, Listeria, and Sulfolobus.
Probab=99.18 E-value=3.1e-11 Score=83.81 Aligned_cols=51 Identities=24% Similarity=0.255 Sum_probs=43.7
Q ss_pred CeeeeEEEEcCCCCCCCCCCCccccCCCCCCC--CcchHHHHHhhhhccEEEEe
Q psy1588 2 RFVEGHSSNNRLISHTPVDTLPFGGVGMSGMG--AYHGKYSFDTFTHRKSCLVK 53 (68)
Q Consensus 2 ~l~aG~V~IN~~~~~~~~~~~PfGG~k~SG~G--~~~g~~~l~~~t~~k~v~~~ 53 (68)
++++|.|+||+.... ..+.+||||+|+||+| +++|.+++++||+.|++++.
T Consensus 424 ~l~~g~v~iN~~~~~-~~~~~pfgG~k~SG~G~~~~~g~~~l~~~~~~k~i~~~ 476 (477)
T TIGR01722 424 EIEVGQVGVNVPIPV-PLPYFSFTGWKDSFFGDHHIYGKQGTHFYTRGKTVTTR 476 (477)
T ss_pred hCCeeeEEECCCCCC-CCCCCCCCccccccCCCCccChHHHHHHhcCeeEEEEe
Confidence 689999999986542 2357899999999999 57899999999999998875
No 85
>cd07114 ALDH_DhaS Uncharacterized Candidatus pelagibacter aldehyde dehydrogenase, DhaS-like. Uncharacterized aldehyde dehydrogenase from Candidatus pelagibacter (DhaS) and other related sequences are present in this CD.
Probab=99.18 E-value=2.4e-11 Score=83.72 Aligned_cols=48 Identities=27% Similarity=0.365 Sum_probs=43.1
Q ss_pred CeeeeEEEEcCCCCCCCCCCCccccCCCCCCCCcchHHHHHhhhhccEEE
Q psy1588 2 RFVEGHSSNNRLISHTPVDTLPFGGVGMSGMGAYHGKYSFDTFTHRKSCL 51 (68)
Q Consensus 2 ~l~aG~V~IN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~ 51 (68)
++++|.|+||+... ..+.+||||+|+||+|+++|.+++++|++.|+++
T Consensus 409 ~l~~g~v~iN~~~~--~~~~~pfgG~k~SG~G~~~g~~~~~~f~~~k~~~ 456 (457)
T cd07114 409 AIEAGTVWVNTYRA--LSPSSPFGGFKDSGIGRENGIEAIREYTQTKSVW 456 (457)
T ss_pred hcCcceEEECCCCC--CCCCCCCCCCccCcCCccchHHHHHHHhceeEEe
Confidence 68999999998654 4567899999999999999999999999999875
No 86
>KOG2451|consensus
Probab=99.17 E-value=8.7e-12 Score=85.69 Aligned_cols=52 Identities=27% Similarity=0.339 Sum_probs=47.3
Q ss_pred CCeeeeEEEEcCCCCCCCCCCCccccCCCCCCCCcchHHHHHhhhhccEEEEec
Q psy1588 1 MRFVEGHSSNNRLISHTPVDTLPFGGVGMSGMGAYHGKYSFDTFTHRKSCLVKD 54 (68)
Q Consensus 1 ~~l~aG~V~IN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~~~ 54 (68)
++|++|+|.+|.... .....||||+|+||+||+++++++++|+..|.+++..
T Consensus 448 e~LEvGmVGvNegli--s~~~~pFGGVKeSG~GREgskyGidey~~ik~icig~ 499 (503)
T KOG2451|consen 448 EALEVGMVGVNEGLI--SDAEAPFGGVKESGFGREGSKYGIDEYLVIKYICIGT 499 (503)
T ss_pred HHHhcceeeccccee--cccccCcCCccccccCccccccchhhhhhhheeeecC
Confidence 368999999999866 6788999999999999999999999999999998864
No 87
>TIGR01804 BADH glycine betaine aldehyde dehydrogenase. Betaine aldehyde dehydrogenase is a member of the aldehyde dehydrogenase family (pfam00171).
Probab=99.17 E-value=2.4e-11 Score=84.04 Aligned_cols=45 Identities=27% Similarity=0.401 Sum_probs=40.0
Q ss_pred CeeeeEEEEcCCCCCCCCCCCccccCCCCCCCCcchHHHHHhhhhcc
Q psy1588 2 RFVEGHSSNNRLISHTPVDTLPFGGVGMSGMGAYHGKYSFDTFTHRK 48 (68)
Q Consensus 2 ~l~aG~V~IN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k 48 (68)
+|++|+|+||+... ....+||||+|+||+|+++|.+++++||+.|
T Consensus 423 ~l~~G~v~iN~~~~--~~~~~pfGG~k~SG~G~~~g~~~~~~~~~~~ 467 (467)
T TIGR01804 423 QLKAGTVWINDFHP--YPAEAPWGGYKQSGIGRENGKAGLAEYTEVK 467 (467)
T ss_pred hCCcceEEECCCCC--CCCCCCcCCcccCccCCCChHHHHHHHhccC
Confidence 68999999998754 4567899999999999999999999999875
No 88
>cd07125 ALDH_PutA-P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA. The proline catabolic enzymes of the aldehyde dehydrogenase (ALDH) protein superfamily, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, (EC=1.5.1.12 )), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA) These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes.
Probab=99.16 E-value=3.9e-11 Score=84.16 Aligned_cols=53 Identities=32% Similarity=0.457 Sum_probs=44.6
Q ss_pred CeeeeEEEEcCCCCCCCCCCCccccCCCCCCCC-cchHHHHHhhhhccEEEEec
Q psy1588 2 RFVEGHSSNNRLISHTPVDTLPFGGVGMSGMGA-YHGKYSFDTFTHRKSCLVKD 54 (68)
Q Consensus 2 ~l~aG~V~IN~~~~~~~~~~~PfGG~k~SG~G~-~~g~~~l~~~t~~k~v~~~~ 54 (68)
++++|.|+||+...+.....+||||+|+||+|+ ++|.+++++|++.|+++++.
T Consensus 455 ~l~~G~V~IN~~~~~~~~~~~PfGG~~~SG~G~~~gg~~~~~~ft~~k~i~~~~ 508 (518)
T cd07125 455 RVEAGNLYINRNITGAIVGRQPFGGWGLSGTGPKAGGPNYLLRFGNEKTVSLNT 508 (518)
T ss_pred hCCcCeEEECCCCCCCCCCCCCCCCcccccCCcccccHHHHHHhcceEEEEEEc
Confidence 689999999987543223568999999999994 68899999999999998764
No 89
>PRK03137 1-pyrroline-5-carboxylate dehydrogenase; Provisional
Probab=99.16 E-value=3.8e-11 Score=84.16 Aligned_cols=52 Identities=29% Similarity=0.293 Sum_probs=43.6
Q ss_pred CeeeeEEEEcCCCCCCCCCCCccccCCCCCCC-CcchHHHHHhhhhccEEEEe
Q psy1588 2 RFVEGHSSNNRLISHTPVDTLPFGGVGMSGMG-AYHGKYSFDTFTHRKSCLVK 53 (68)
Q Consensus 2 ~l~aG~V~IN~~~~~~~~~~~PfGG~k~SG~G-~~~g~~~l~~~t~~k~v~~~ 53 (68)
++++|+|+||+...+.....+||||+|.||+| +++|.+++++|++.|++...
T Consensus 461 ~l~~G~v~IN~~~~~~~~~~~PfGG~k~SG~G~~~gg~~~l~~ft~~k~v~~~ 513 (514)
T PRK03137 461 EFHVGNLYFNRGCTGAIVGYHPFGGFNMSGTDSKAGGPDYLLLFLQAKTVSEM 513 (514)
T ss_pred hCCcCeEEECCCCCCCCCCCCCCCCcccccCCcccCCHHHHHHhceEEEEEEe
Confidence 68999999998754323356899999999999 68999999999999998653
No 90
>cd07083 ALDH_P5CDH ALDH subfamily NAD+-dependent delta(1)-pyrroline-5-carboxylate dehydrogenase-like. ALDH subfamily of the NAD+-dependent, delta(1)-pyrroline-5-carboxylate dehydrogenases (P5CDH, EC=1.5.1.12). The proline catabolic enzymes, proline dehydrogenase and P5CDH catalyze the two-step oxidation of proline to glutamate. P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Monofunctional enzyme sequences such as those seen in the Bacillus RocA P5CDH are also present in this subfamily as well as the human ALDH4A1 P5CDH and the Drosophila Aldh17 P5CDH.
Probab=99.15 E-value=4.9e-11 Score=83.31 Aligned_cols=52 Identities=29% Similarity=0.395 Sum_probs=43.8
Q ss_pred CeeeeEEEEcCCCCCCCCCCCccccCCCCCCC-CcchHHHHHhhhhccEEEEe
Q psy1588 2 RFVEGHSSNNRLISHTPVDTLPFGGVGMSGMG-AYHGKYSFDTFTHRKSCLVK 53 (68)
Q Consensus 2 ~l~aG~V~IN~~~~~~~~~~~PfGG~k~SG~G-~~~g~~~l~~~t~~k~v~~~ 53 (68)
++++|+|+||+...+.....+||||+|.||+| +++|.+++++|++.|++..+
T Consensus 447 ~l~~g~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~~g~~~l~~~~~~k~~~~~ 499 (500)
T cd07083 447 EFHVGNLYINRKITGALVGVQPFGGFKLSGTNAKTGGPHYLRRFLEMKAVAER 499 (500)
T ss_pred hCCeeEEEECCCCCCCCCCCCCCCccccccCCCcccCHHHHHHhhheeEEEEc
Confidence 68999999998754322346899999999999 68899999999999998754
No 91
>cd07108 ALDH_MGR_2402 Magnetospirillum NAD(P)+-dependent aldehyde dehydrogenase MSR-1-like. NAD(P)+-dependent aldehyde dehydrogenase of Magnetospirillum gryphiswaldense MSR-1 (MGR_2402) , and other similar sequences, are present in this CD.
Probab=99.15 E-value=3e-11 Score=83.31 Aligned_cols=48 Identities=21% Similarity=0.281 Sum_probs=42.1
Q ss_pred CeeeeEEEEcCCCCCCCCCCCccccCCCCCCCCcchHHH-HHhhhhccEEE
Q psy1588 2 RFVEGHSSNNRLISHTPVDTLPFGGVGMSGMGAYHGKYS-FDTFTHRKSCL 51 (68)
Q Consensus 2 ~l~aG~V~IN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~-l~~~t~~k~v~ 51 (68)
++++|.|+||+... ..+.+||||+|+||+|+++|.++ +++|++.|+++
T Consensus 408 ~l~~g~v~iN~~~~--~~~~~pfGG~k~SG~G~~~g~~~~~~~f~~~k~i~ 456 (457)
T cd07108 408 ALEAGWVQVNQGGG--QQPGQSYGGFKQSGLGREASLEGMLEHFTQKKTVN 456 (457)
T ss_pred hcCcceEEECCCCC--CCCCCCcCCcccCcCCCCccchhHHHHhhceEEEe
Confidence 68999999999865 45678999999999999999866 79999999875
No 92
>cd07123 ALDH_F4-17_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH families 4 and 17. Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), families 4 and 17: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), also known as ALDH4A1 in humans, is a mitochondrial homodimer involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. The preferred substrate is glutamic gamma-semialdehyde, other substrates include succinic, glutaric and adipic semialdehydes. Also included in this CD is the Aldh17 Drosophila melanogaster (Q9VUC0) P5CDH and similar sequences.
Probab=99.14 E-value=6.4e-11 Score=83.24 Aligned_cols=51 Identities=18% Similarity=0.184 Sum_probs=42.9
Q ss_pred eeeeEEEEcCCCCCCCCCCCccccCCCCCCC-CcchHHHHHhhhhccEEEEe
Q psy1588 3 FVEGHSSNNRLISHTPVDTLPFGGVGMSGMG-AYHGKYSFDTFTHRKSCLVK 53 (68)
Q Consensus 3 l~aG~V~IN~~~~~~~~~~~PfGG~k~SG~G-~~~g~~~l~~~t~~k~v~~~ 53 (68)
+++|+|+||+...+.....+||||+|+||+| +++|.+++++|++.|++...
T Consensus 468 ~~~G~v~iN~~~~~~~~~~~PfGG~k~SG~gg~~~g~~~l~~~~~~k~~~~~ 519 (522)
T cd07123 468 NAAGNFYINDKPTGAVVGQQPFGGARASGTNDKAGSPLNLLRWVSPRTIKET 519 (522)
T ss_pred hcCcEEEECCCCCCCCCCCCCCCcchhcCCCcccCCHHHHHHhcceEEEEEe
Confidence 4699999998754322357899999999996 99999999999999998765
No 93
>cd07103 ALDH_F5_SSADH_GabD Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like. Succinate-semialdehyde dehydrogenase, mitochondrial (SSADH, GabD, EC=1.2.1.24) catalyzes the NAD+-dependent oxidation of succinate semialdehyde (SSA) to succinate. This group includes the human aldehyde dehydrogenase family 5 member A1 (ALDH5A1) which is a mitochondrial homotetramer that converts SSA to succinate in the last step of 4-aminobutyric acid (GABA) catabolism. This CD also includes the Arabidopsis SSADH gene product ALDH5F1. Mutations in this gene result in the accumulation of H2O2, suggesting a role in plant defense against the environmental stress of elevated reactive oxygen species.
Probab=99.13 E-value=5.5e-11 Score=81.67 Aligned_cols=48 Identities=27% Similarity=0.379 Sum_probs=43.3
Q ss_pred CeeeeEEEEcCCCCCCCCCCCccccCCCCCCCCcchHHHHHhhhhccEEE
Q psy1588 2 RFVEGHSSNNRLISHTPVDTLPFGGVGMSGMGAYHGKYSFDTFTHRKSCL 51 (68)
Q Consensus 2 ~l~aG~V~IN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~ 51 (68)
++++|.|+||+... ..+.+||||+|+||+|+++|.+++++|++.|++.
T Consensus 403 ~l~~g~v~vN~~~~--~~~~~pfgG~~~SG~G~~~g~~~~~~~~~~k~v~ 450 (451)
T cd07103 403 ALEAGMVGINTGLI--SDAEAPFGGVKESGLGREGGKEGLEEYLETKYVS 450 (451)
T ss_pred hCCcceEEECCCCC--CCCCCCcCCCccCcCCccchHHHHHHHhceeEEe
Confidence 68999999999864 4567899999999999999999999999999875
No 94
>PLN02418 delta-1-pyrroline-5-carboxylate synthase
Probab=99.12 E-value=6.1e-11 Score=86.12 Aligned_cols=52 Identities=17% Similarity=0.154 Sum_probs=44.4
Q ss_pred CCeeeeEEEEcCCCCCCCCCCCccccCCCCCC--CCcc--hHHHHHhhhhccEEEEec
Q psy1588 1 MRFVEGHSSNNRLISHTPVDTLPFGGVGMSGM--GAYH--GKYSFDTFTHRKSCLVKD 54 (68)
Q Consensus 1 ~~l~aG~V~IN~~~~~~~~~~~PfGG~k~SG~--G~~~--g~~~l~~~t~~k~v~~~~ 54 (68)
++|++|+|+||++.. .....||||+|+||+ |+++ |.+++++|++.|++++..
T Consensus 642 ~~l~aG~V~IN~~~~--~~~~~PfGG~k~SG~stGr~~~~G~~gl~~~t~~K~v~~g~ 697 (718)
T PLN02418 642 RQVDSAAVFHNASTR--FSDGARFGLGAEVGISTGRIHARGPVGVEGLLTTRWILRGN 697 (718)
T ss_pred HhCCeeEEEEeCCCC--CCCCCCCCCcccccccCCcCCCCCHHHHHHHhcEEEEEECC
Confidence 378999999998754 345679999999999 9774 999999999999987753
No 95
>cd07138 ALDH_CddD_SSP0762 Rhodococcus ruber 6-oxolauric acid dehydrogenase-like. The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid, and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and other similar sequences, are included in this CD.
Probab=99.12 E-value=6e-11 Score=82.03 Aligned_cols=47 Identities=32% Similarity=0.447 Sum_probs=42.0
Q ss_pred CeeeeEEEEcCCCCCCCCCCCccccCCCCCCCCcchHHHHHhhhhccEEE
Q psy1588 2 RFVEGHSSNNRLISHTPVDTLPFGGVGMSGMGAYHGKYSFDTFTHRKSCL 51 (68)
Q Consensus 2 ~l~aG~V~IN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~ 51 (68)
++++|+|+||+.. ..+.+||||+|.||+|+++|.+++++|++.|+++
T Consensus 419 ~l~~G~v~iN~~~---~~~~~PfgG~k~SG~G~~~g~~~~~~~~~~k~v~ 465 (466)
T cd07138 419 RLRAGQVHINGAA---FNPGAPFGGYKQSGNGREWGRYGLEEFLEVKSIQ 465 (466)
T ss_pred hcCcceEEECCCC---CCCCCCcCCcccccCCccchHHHHHHhcceeEEe
Confidence 6899999999853 3567899999999999999999999999999875
No 96
>PF00171 Aldedh: Aldehyde dehydrogenase family; InterPro: IPR015590 Aldehyde dehydrogenases (1.2.1.3 from EC and 1.2.1.5 from EC) are enzymes that oxidize a wide variety of aliphatic and aromatic aldehydes using NADP as a cofactor. In mammals at least four different forms of the enzyme are known []: class-1 (or Ald C) a tetrameric cytosolic enzyme, class-2 (or Ald M) a tetrameric mitochondrial enzyme, class- 3 (or Ald D) a dimeric cytosolic enzyme, and class IV a microsomal enzyme. Aldehyde dehydrogenases have also been sequenced from fungal and bacterial species. A number of enzymes are known to be evolutionary related to aldehyde dehydrogenases. A glutamic acid and a cysteine residue have been implicated in the catalytic activity of mammalian aldehyde dehydrogenase. These residues are conserved in all the enzymes of this entry. Some of the proteins in this entry are allergens. Allergies are hypersensitivity reactions of the immune system to specific substances called allergens (such as pollen, stings, drugs, or food) that, in most people, result in no symptoms. A nomenclature system has been established for antigens (allergens) that cause IgE-mediated atopic allergies in humans [WHO/IUIS Allergen Nomenclature Subcommittee King T.P., Hoffmann D., Loewenstein H., Marsh D.G., Platts-Mills T.A.E., Thomas W. Bull. World Health Organ. 72:797-806(1994)]. This nomenclature system is defined by a designation that is composed of the first three letters of the genus; a space; the first letter of the species name; a space and an arabic number. In the event that two species names have identical designations, they are discriminated from one another by adding one or more letters (as necessary) to each species designation. The allergens in this family include allergens with the following designations: Alt a 10 and Cla h 3.; GO: 0016491 oxidoreductase activity, 0008152 metabolic process, 0055114 oxidation-reduction process; PDB: 3R31_A 3HAZ_A 1UXQ_A 1UXP_A 1UXR_A 1UXU_A 1UXN_A 1KY8_A 1UXT_A 1UXV_A ....
Probab=99.11 E-value=1.9e-11 Score=84.38 Aligned_cols=48 Identities=35% Similarity=0.511 Sum_probs=40.5
Q ss_pred CeeeeEEEEcCCCCCCCCCCCccccCCCCCCCCcchHHHHHhhhhccEE
Q psy1588 2 RFVEGHSSNNRLISHTPVDTLPFGGVGMSGMGAYHGKYSFDTFTHRKSC 50 (68)
Q Consensus 2 ~l~aG~V~IN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v 50 (68)
++++|.|+||+...+... .+||||+|+||+|+++|.+++++|++.|+|
T Consensus 415 ~l~~g~v~iN~~~~~~~~-~~pfgG~~~SG~G~~~g~~~l~~~~~~k~V 462 (462)
T PF00171_consen 415 RLEAGRVWINDPPTGDPD-GLPFGGFKQSGIGREGGPEGLDEFTQIKTV 462 (462)
T ss_dssp HSTSSEEEESSSSTGGTT-SSEBE-SGGGEESEBSHHHHHHGTEEEEEE
T ss_pred cccccceeecCCcccccc-cCCCCCcccccCCcchHHHHHHHhCCccCC
Confidence 578999999998653222 279999999999999999999999999986
No 97
>cd07146 ALDH_PhpJ Streptomyces putative phosphonoformaldehyde dehydrogenase PhpJ-like. Putative phosphonoformaldehyde dehydrogenase (PhpJ), an aldehyde dehydrogenase homolog reportedly involved in the biosynthesis of phosphinothricin tripeptides in Streptomyces viridochromogenes DSM 40736, and similar sequences are included in this CD.
Probab=99.10 E-value=7.2e-11 Score=81.55 Aligned_cols=49 Identities=27% Similarity=0.348 Sum_probs=41.8
Q ss_pred CeeeeEEEEcCCCCCCCCCCCccccCCCCCC-CCcchHHHHHhhhhccEEE
Q psy1588 2 RFVEGHSSNNRLISHTPVDTLPFGGVGMSGM-GAYHGKYSFDTFTHRKSCL 51 (68)
Q Consensus 2 ~l~aG~V~IN~~~~~~~~~~~PfGG~k~SG~-G~~~g~~~l~~~t~~k~v~ 51 (68)
+|++|.|+||+... ...+.+||||+|+||+ |+++|.+++++|++.|+++
T Consensus 401 ~l~~G~v~iN~~~~-~~~~~~PfGG~k~SG~~g~~~g~~~~~~f~~~k~~~ 450 (451)
T cd07146 401 RLDVGTVNVNEVPG-FRSELSPFGGVKDSGLGGKEGVREAMKEMTNVKTYS 450 (451)
T ss_pred HCCcceEEECCCCC-CCCCCCCcCcccccCCCcccChHHHHHHHhceeEEe
Confidence 68999999998643 1335789999999995 7999999999999999875
No 98
>TIGR03240 arg_catab_astD succinylglutamic semialdehyde dehydrogenase. Members of this protein family are succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71), the fourth enzyme in the arginine succinyltransferase (AST) pathway for arginine catabolism.
Probab=99.02 E-value=3.4e-10 Score=78.80 Aligned_cols=51 Identities=22% Similarity=0.365 Sum_probs=43.0
Q ss_pred CeeeeEEEEcCCCCCCCCCCCccccCCCCCCCCcchHHHHHhhhhccEEEEec
Q psy1588 2 RFVEGHSSNNRLISHTPVDTLPFGGVGMSGMGAYHGKYSFDTFTHRKSCLVKD 54 (68)
Q Consensus 2 ~l~aG~V~IN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~~~ 54 (68)
++++|+|+||+...+ ....+||||+|+||+|++.|..+++ |++.|+++++.
T Consensus 419 ~l~aG~v~iN~~~~~-~~~~~pfGG~~~SG~g~~~g~~~~~-~~~~~~~~~~~ 469 (484)
T TIGR03240 419 EIRAGIVNWNKPLTG-ASSAAPFGGIGASGNHRPSAYYAAD-YCAYPVASLEA 469 (484)
T ss_pred hCCcceEEEECCCCC-CCCCCCcCCcccccCCCCCchHHHh-heeeeEEEEec
Confidence 689999999987543 3467899999999999999966655 99999999885
No 99
>PRK09457 astD succinylglutamic semialdehyde dehydrogenase; Reviewed
Probab=99.02 E-value=3.3e-10 Score=78.96 Aligned_cols=51 Identities=22% Similarity=0.352 Sum_probs=42.3
Q ss_pred CeeeeEEEEcCCCCCCCCCCCccccCCCCCCCCcchHHHHHhhhhccEEEEec
Q psy1588 2 RFVEGHSSNNRLISHTPVDTLPFGGVGMSGMGAYHGKYSFDTFTHRKSCLVKD 54 (68)
Q Consensus 2 ~l~aG~V~IN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~~~ 54 (68)
++++|+|+||+...+ ....+||||+|+||+|++.|... .+|++.|++.++.
T Consensus 421 ~l~~G~v~iN~~~~~-~~~~~PfGG~k~SG~G~~~g~~~-~~~~~~k~~~~~~ 471 (487)
T PRK09457 421 EIRAGIVNWNKPLTG-ASSAAPFGGVGASGNHRPSAYYA-ADYCAYPMASLES 471 (487)
T ss_pred hCCcceEEEECCCCC-CCCCCCCCCcccccCCCCCchhH-hhheeeeEEEEec
Confidence 689999999987543 34578999999999999988554 5599999988884
No 100
>TIGR01238 D1pyr5carbox3 delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain). This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch are the C-terminal domain of the PutA bifunctional proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase.
Probab=99.02 E-value=2.5e-10 Score=80.07 Aligned_cols=47 Identities=30% Similarity=0.375 Sum_probs=39.8
Q ss_pred CeeeeEEEEcCCCCCCCCCCCccccCCCCCCC-CcchHHHHHhhhhcc
Q psy1588 2 RFVEGHSSNNRLISHTPVDTLPFGGVGMSGMG-AYHGKYSFDTFTHRK 48 (68)
Q Consensus 2 ~l~aG~V~IN~~~~~~~~~~~PfGG~k~SG~G-~~~g~~~l~~~t~~k 48 (68)
++++|+|+||+...+.....+||||+|+||+| +++|.+++++|++.|
T Consensus 452 ~l~~G~v~IN~~~~~~~~~~~PfGG~k~SG~G~~~gg~~~~~~~~~~k 499 (500)
T TIGR01238 452 HARVGNCYVNRNQVGAVVGVQPFGGQGLSGTGPKAGGPHYLYRLTQVQ 499 (500)
T ss_pred hCCcceEEECCCCCCCCCCCCCCCccccccCCCccCCHHHHHHHHhhc
Confidence 68999999998764322245799999999999 799999999999976
No 101
>KOG2452|consensus
Probab=98.98 E-value=4.3e-10 Score=79.55 Aligned_cols=51 Identities=22% Similarity=0.333 Sum_probs=46.1
Q ss_pred CCeeeeEEEEcCCCCCCCCCCCccccCCCCCCCCcchHHHHHhhhhccEEEEe
Q psy1588 1 MRFVEGHSSNNRLISHTPVDTLPFGGVGMSGMGAYHGKYSFDTFTHRKSCLVK 53 (68)
Q Consensus 1 ~~l~aG~V~IN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~~ 53 (68)
+.|++|+|.||.+.- .+..+||||+|+||+|.+.|.+++.+|...|++++.
T Consensus 830 ~~l~agtvfvnty~k--tdvaapfggfkqsgfgkd~ge~alneyl~~ktit~e 880 (881)
T KOG2452|consen 830 DKLQAGTVFVNTYNK--TDVAAPFGGFKQSGFGKDLGEAALNEYLRVKTVTFE 880 (881)
T ss_pred hhhccceEEEeeccc--cccccCCCCccccccccchhHHHHhhheeeEEEEee
Confidence 368999999999865 567899999999999999999999999999999875
No 102
>PRK11904 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed
Probab=98.94 E-value=1.4e-09 Score=81.61 Aligned_cols=54 Identities=31% Similarity=0.391 Sum_probs=44.9
Q ss_pred CCeeeeEEEEcCCCCCCCCCCCccccCCCCCCC-CcchHHHHHhhhhccEEEEec
Q psy1588 1 MRFVEGHSSNNRLISHTPVDTLPFGGVGMSGMG-AYHGKYSFDTFTHRKSCLVKD 54 (68)
Q Consensus 1 ~~l~aG~V~IN~~~~~~~~~~~PfGG~k~SG~G-~~~g~~~l~~~t~~k~v~~~~ 54 (68)
+++++|.|+||+...+......||||+|.||.| +.+|+++++.|++.|+|+++.
T Consensus 973 ~~l~aG~vyIN~~~~ga~vg~qPFGG~~~SG~G~kaGG~~~L~~f~~~ktv~~~~ 1027 (1038)
T PRK11904 973 DRVRVGNVYVNRNQIGAVVGVQPFGGQGLSGTGPKAGGPHYLLRFATEKTVTVNT 1027 (1038)
T ss_pred HhCCEEEEEEeCCCccCCCCCCCCCCCCCCCCCCccchHHHHHHHhceEEEEEcc
Confidence 368999999998765322245699999999999 678999999999999998764
No 103
>PRK00197 proA gamma-glutamyl phosphate reductase; Provisional
Probab=98.93 E-value=4.3e-10 Score=77.26 Aligned_cols=50 Identities=16% Similarity=0.090 Sum_probs=44.2
Q ss_pred CeeeeEEEEcCCCCCCCCCCCccccCCCCCCC----CcchHHHHHhhhhccEEEEe
Q psy1588 2 RFVEGHSSNNRLISHTPVDTLPFGGVGMSGMG----AYHGKYSFDTFTHRKSCLVK 53 (68)
Q Consensus 2 ~l~aG~V~IN~~~~~~~~~~~PfGG~k~SG~G----~~~g~~~l~~~t~~k~v~~~ 53 (68)
++++|+|+||++.. .....||||.|.||+| +++|.+++++|++.|++++.
T Consensus 358 ~l~~G~v~VN~~~~--~~~~~p~G~~~~sG~g~~~~~~~g~~~l~~~~~~k~v~~~ 411 (417)
T PRK00197 358 EVDSAAVYVNASTR--FTDGGEFGLGAEIGISTQKLHARGPMGLEELTTYKYIVLG 411 (417)
T ss_pred hCCeeEEEEeCCCc--cCCCCccccchhheeecCCCcCCCccchHhhcEEEEEEEC
Confidence 68999999998764 3457899999999999 89999999999999998864
No 104
>cd07128 ALDH_MaoC-N N-terminal domain of the monoamine oxidase C dehydratase. The N-terminal domain of the MaoC dehydratase, a monoamine oxidase regulatory protein. Orthologs of MaoC include PaaZ (Escherichia coli) and PaaN (Pseudomonas putida), which are putative ring-opening enzymes of the aerobic phenylacetic acid (PA) catabolic pathway. The C-terminal domain of MaoC has sequence similarity to enoyl-CoA hydratase. Also included in this CD is a novel Burkholderia xenovorans LB400 ALDH of the aerobic benzoate oxidation (box) pathway. This pathway involves first the synthesis of a CoA thio-esterified aromatic acid, with subsequent dihydroxylation and cleavage steps, yielding the CoA thio-esterified aliphatic aldehyde, 3,4-dehydroadipyl-CoA semialdehyde, which is further converted into its corresponding CoA acid by the Burkholderia LB400 ALDH.
Probab=98.93 E-value=9e-10 Score=77.56 Aligned_cols=51 Identities=24% Similarity=0.279 Sum_probs=40.7
Q ss_pred Cee--eeEEEEcCCCC------C-CCCCCCccccCCCCCCCCcc-hHHHHHhhhhccEEEE
Q psy1588 2 RFV--EGHSSNNRLIS------H-TPVDTLPFGGVGMSGMGAYH-GKYSFDTFTHRKSCLV 52 (68)
Q Consensus 2 ~l~--aG~V~IN~~~~------~-~~~~~~PfGG~k~SG~G~~~-g~~~l~~~t~~k~v~~ 52 (68)
+|+ +|+|+||+... + ...+.+||||+|.||+|++. |.+++++|++.|++.-
T Consensus 443 ~l~~~~G~v~IN~~~~~~~~~~~~~~~~~~pfGG~k~SG~G~~~gg~~~l~~~~~~k~v~~ 503 (513)
T cd07128 443 GAAPYHGRLLVLNRDSAKESTGHGSPLPQLVHGGPGRAGGGEELGGLRGVKHYMQRTAVQG 503 (513)
T ss_pred HHHhhCCEEEEcCCccccccccccCCCCCCCCCCcccCCCCcccccHHHHHHhheeeeeeC
Confidence 454 89999998631 0 12357899999999999994 7999999999998764
No 105
>cd07095 ALDH_SGSD_AstD N-succinylglutamate 5-semialdehyde dehydrogenase, AstD-like. N-succinylglutamate 5-semialdehyde dehydrogenase or succinylglutamic semialdehyde dehydrogenase (SGSD, E. coli AstD, EC=1.2.1.71) involved in L-arginine degradation via the arginine succinyltransferase (AST) pathway and catalyzes the NAD+-dependent reduction of succinylglutamate semialdehyde into succinylglutamate.
Probab=98.92 E-value=8e-10 Score=76.10 Aligned_cols=45 Identities=33% Similarity=0.428 Sum_probs=37.3
Q ss_pred CeeeeEEEEcCCCCCCCCCCCccccCCCCCCCCcchHHHHHhhhhc
Q psy1588 2 RFVEGHSSNNRLISHTPVDTLPFGGVGMSGMGAYHGKYSFDTFTHR 47 (68)
Q Consensus 2 ~l~aG~V~IN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~ 47 (68)
++++|.|+||+.... ....+||||+|+||+|+++|.++++.|+.+
T Consensus 383 ~l~~G~v~iN~~~~~-~~~~~PfGG~k~SG~G~~~g~~~~~~~~~~ 427 (431)
T cd07095 383 RIRAGIVNWNRPTTG-ASSTAPFGGVGLSGNHRPSAYYAADYCAYP 427 (431)
T ss_pred hCCcceEEECCCCCC-CCCCCCCCCcccccCCCCChHHHHHHHhhh
Confidence 689999999986542 345689999999999999999999955543
No 106
>PRK11903 aldehyde dehydrogenase; Provisional
Probab=98.90 E-value=1.1e-09 Score=77.14 Aligned_cols=50 Identities=18% Similarity=0.201 Sum_probs=39.0
Q ss_pred eeeEEEEcCCCC------C-CCCCCCccccCCCCCCCCcc-hHHHHHhhhhccEEEEe
Q psy1588 4 VEGHSSNNRLIS------H-TPVDTLPFGGVGMSGMGAYH-GKYSFDTFTHRKSCLVK 53 (68)
Q Consensus 4 ~aG~V~IN~~~~------~-~~~~~~PfGG~k~SG~G~~~-g~~~l~~~t~~k~v~~~ 53 (68)
++|+|+||+... + ...+.+||||+|.||+|++. +.+++++||++|++...
T Consensus 450 ~~G~V~iN~~~~~~~~~~~~~~~~~~PfGG~k~SG~Gr~~g~~~~l~~~t~~~~~~~~ 507 (521)
T PRK11903 450 SHGRVHVISPDVAALHTGHGNVMPQSLHGGPGRAGGGEELGGLRALAFYHRRSAVQAS 507 (521)
T ss_pred hCCEEEEcCcccccccccCCCCCCCCCCCCCCcCcCCcccccHHHHHHHhccceeeCC
Confidence 799999997532 0 12357899999999999985 48999999997766543
No 107
>cd07079 ALDH_F18-19_ProA-GPR Gamma-glutamyl phosphate reductase (GPR), aldehyde dehydrogenase families 18 and 19. Gamma-glutamyl phosphate reductase (GPR), a L-proline biosynthetic pathway (PBP) enzyme that catalyzes the NADPH dependent reduction of L-gamma-glutamyl 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The glutamate route of the PBP involves two enzymatic steps catalyzed by gamma-glutamyl kinase (GK, EC 2.7.2.11) and GPR (EC 1.2.1.41). These enzymes are fused into the bifunctional enzyme, ProA or delta(1)-pyrroline-5-carboxylate synthetase (P5CS) in plants and animals, whereas they are separate enzymes in bacteria and yeast. In humans, the P5CS (ALDH18A1), an inner mitochondrial membrane enzyme, is essential to the de novo synthesis of the amino acids proline and arginine. Tomato (Lycopersicon esculentum) has both the prokaryotic-like polycistronic operons encoding GK and GPR (PRO1, ALDH19) and the full-length, bifunctional P5CS (PRO2, ALDH18B1).
Probab=98.89 E-value=8e-10 Score=75.72 Aligned_cols=49 Identities=16% Similarity=0.041 Sum_probs=42.9
Q ss_pred CeeeeEEEEcCCCCCCCCCCCccccCCCCCC----CCcchHHHHHhhhhccEEEE
Q psy1588 2 RFVEGHSSNNRLISHTPVDTLPFGGVGMSGM----GAYHGKYSFDTFTHRKSCLV 52 (68)
Q Consensus 2 ~l~aG~V~IN~~~~~~~~~~~PfGG~k~SG~----G~~~g~~~l~~~t~~k~v~~ 52 (68)
++++|.|+||++.. .....||||.+.||+ |+++|.+++++|++.|++.+
T Consensus 352 ~~~~G~v~iN~~~~--~~~~~pfg~~~~sG~~~~~g~~~g~~~l~~~~~~k~i~~ 404 (406)
T cd07079 352 EVDSAAVYVNASTR--FTDGGEFGLGAEIGISTQKLHARGPMGLEELTTYKYIVR 404 (406)
T ss_pred hCCeeEEEEeCCCc--ccCCCccccceeeeeecCCCcCCCCcChHHhcEEEEEEe
Confidence 68999999998764 345689999999998 89999999999999999865
No 108
>TIGR02278 PaaN-DH phenylacetic acid degradation protein paaN. This family includes paaN genes from Pseudomonas, Sinorhizobium, Rhodopseudomonas, Escherichia, Deinococcus and Corynebacterium. Another homology family (TIGR02288) includes several other species.
Probab=98.88 E-value=1.8e-09 Score=77.95 Aligned_cols=51 Identities=27% Similarity=0.350 Sum_probs=39.9
Q ss_pred eeeEEEE-cCCC-----CC-CCCCCCccccCCCCCCCCc-chHHHHHhhhhccEEEEec
Q psy1588 4 VEGHSSN-NRLI-----SH-TPVDTLPFGGVGMSGMGAY-HGKYSFDTFTHRKSCLVKD 54 (68)
Q Consensus 4 ~aG~V~I-N~~~-----~~-~~~~~~PfGG~k~SG~G~~-~g~~~l~~~t~~k~v~~~~ 54 (68)
++|+|+| |++. .+ ...+.+||||+|+||+|++ ++.+++++|++.|++...+
T Consensus 439 ~~G~v~InN~~~~~~~~~~~~~~~~~pfGG~k~SG~G~~~g~~~~l~~f~~~k~v~~~~ 497 (663)
T TIGR02278 439 YHGRLHILNRDDAAESTGHGSPLPRLLHGGPGRAGGGEELGGLRSVKHYMQRTAIQGSP 497 (663)
T ss_pred hCCEEEECCCcccccccCCCCCCCCCCCCCCccCcCCCccchHHHHHHhceeEEEEcCH
Confidence 7999999 6421 11 1235689999999999999 4689999999999987654
No 109
>TIGR01092 P5CS delta l-pyrroline-5-carboxylate synthetase. This protein contains a glutamate 5-kinase (ProB, EC 2.7.2.11) region followed by a gamma-glutamyl phosphate reductase (ProA, EC 1.2.1.41) region.
Probab=98.87 E-value=2.4e-09 Score=77.83 Aligned_cols=51 Identities=14% Similarity=0.092 Sum_probs=43.4
Q ss_pred CeeeeEEEEcCCCCCCCCCCCccccCCCCCCCC----cchHHHHHhhhhccEEEEec
Q psy1588 2 RFVEGHSSNNRLISHTPVDTLPFGGVGMSGMGA----YHGKYSFDTFTHRKSCLVKD 54 (68)
Q Consensus 2 ~l~aG~V~IN~~~~~~~~~~~PfGG~k~SG~G~----~~g~~~l~~~t~~k~v~~~~ 54 (68)
++++|.|+||++.. .....||||.|.||+|+ +.|.+++++|++.|++.+..
T Consensus 637 ~i~sG~V~vN~~~~--~~~~~pfGG~k~SG~g~~~~~~~g~~~l~~~~~~k~v~~g~ 691 (715)
T TIGR01092 637 HVDSAAVFHNASTR--FSDGFRFGLGAEVGISTSRIHARGPVGVEGLLTTRWLLRGK 691 (715)
T ss_pred hCCeeEEEEeCCCC--CCCCCCCcCccccccccCCCCCCChhHHHHhceEEEEEECC
Confidence 68999999998754 35678999999999995 37899999999999987653
No 110
>cd06534 ALDH-SF NAD(P)+-dependent aldehyde dehydrogenase superfamily. The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydri
Probab=98.86 E-value=3e-09 Score=71.26 Aligned_cols=49 Identities=31% Similarity=0.470 Sum_probs=43.1
Q ss_pred CeeeeEEEEcCCCCCCCCCCCccccCCCCCCCCcchHHHHHhhhhccEEE
Q psy1588 2 RFVEGHSSNNRLISHTPVDTLPFGGVGMSGMGAYHGKYSFDTFTHRKSCL 51 (68)
Q Consensus 2 ~l~aG~V~IN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~ 51 (68)
++++|.|+||+.... ..+..||||.++||+|+++|.+++++|++.|++.
T Consensus 318 ~~~~g~v~iN~~~~~-~~~~~pfgg~~~sG~g~~~g~~~~~~~~~~k~i~ 366 (367)
T cd06534 318 RLRAGTVYINDSSIG-VGPEAPFGGVKNSGIGREGGPYGLEEYTRTKTVV 366 (367)
T ss_pred hCCcceEEECCCCCC-CCCCCCCCCcccCccCCCChHHHHHHhceEEEEe
Confidence 578999999998752 2678899999999999999999999999999864
No 111
>PRK11563 bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; Provisional
Probab=98.84 E-value=2.5e-09 Score=77.24 Aligned_cols=53 Identities=21% Similarity=0.213 Sum_probs=41.8
Q ss_pred Cee--eeEEEEcCCCC------CCC-CCCCccccCCCCCCCCc-chHHHHHhhhhccEEEEec
Q psy1588 2 RFV--EGHSSNNRLIS------HTP-VDTLPFGGVGMSGMGAY-HGKYSFDTFTHRKSCLVKD 54 (68)
Q Consensus 2 ~l~--aG~V~IN~~~~------~~~-~~~~PfGG~k~SG~G~~-~g~~~l~~~t~~k~v~~~~ 54 (68)
+|+ +|.|+||+... +.. .+.+||||+|+||+|++ +|.+++++|++.|++...+
T Consensus 447 ~l~~~~G~v~iN~~~~~~~~~~~~~~~~~~pfGG~k~SG~G~~~~g~~~~~~f~~~k~~~~~~ 509 (675)
T PRK11563 447 GAAPWHGRLLVLNRESAKESTGHGSPLPQLVHGGPGRAGGGEELGGLRGVKHYMQRTAVQGSP 509 (675)
T ss_pred HHHhcCCEEEEcCccccccccCCCCCCcCCCcCCCCCCCCCccccchhHHHHhheeeeeecCH
Confidence 454 89999997421 111 25789999999999998 4699999999999987765
No 112
>cd07078 ALDH NAD(P)+ dependent aldehyde dehydrogenase family. The aldehyde dehydrogenase family (ALDH) of NAD(P)+ dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or as osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer
Probab=98.84 E-value=4.4e-09 Score=71.67 Aligned_cols=49 Identities=31% Similarity=0.497 Sum_probs=43.6
Q ss_pred CeeeeEEEEcCCCCCCCCCCCccccCCCCCCCCcchHHHHHhhhhccEEE
Q psy1588 2 RFVEGHSSNNRLISHTPVDTLPFGGVGMSGMGAYHGKYSFDTFTHRKSCL 51 (68)
Q Consensus 2 ~l~aG~V~IN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~ 51 (68)
++++|.|+||+...+ ..+.+||||.+.||+|+.+|.+++++|++.|++.
T Consensus 383 ~~~~g~v~iN~~~~~-~~~~~pfgG~~~sg~g~~~g~~~~~~~~~~k~v~ 431 (432)
T cd07078 383 RLEAGTVWINDYSVG-AEPSAPFGGVKQSGIGREGGPYGLEEYTEPKTVT 431 (432)
T ss_pred hcCcceEEECCCCCC-CCCCCCcCCcCcCcCCccchHHHHHHhhceEEEE
Confidence 578999999998763 3678999999999999999999999999999874
No 113
>PRK11905 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed
Probab=98.76 E-value=1.3e-08 Score=77.52 Aligned_cols=54 Identities=28% Similarity=0.404 Sum_probs=44.8
Q ss_pred CCeeeeEEEEcCCCCCCCCCCCccccCCCCCCC-CcchHHHHHhhhhccEEEEec
Q psy1588 1 MRFVEGHSSNNRLISHTPVDTLPFGGVGMSGMG-AYHGKYSFDTFTHRKSCLVKD 54 (68)
Q Consensus 1 ~~l~aG~V~IN~~~~~~~~~~~PfGG~k~SG~G-~~~g~~~l~~~t~~k~v~~~~ 54 (68)
+++++|.|+||+...+......||||+|.||.| +.+|++++..|++.|++++..
T Consensus 965 ~~l~aGnvyIN~~~~ga~vg~qPFGG~~~SG~G~kaGGp~~L~~f~~~k~v~~~~ 1019 (1208)
T PRK11905 965 SRIRAGNIYVNRNIIGAVVGVQPFGGEGLSGTGPKAGGPLYLGRLVREAPTPIPP 1019 (1208)
T ss_pred HhCCEeEEEECCCCCCCccCCCCCCCCCCCCCCCcCCCHHHHHHHhhcceeeccc
Confidence 368999999998765322245799999999999 589999999999999998764
No 114
>cd07077 ALDH-like NAD(P)+-dependent aldehyde dehydrogenase-like (ALDH-like) family. The aldehyde dehydrogenase-like (ALDH-like) group of the ALDH superfamily of NAD(P)+-dependent enzymes which, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. This group includes families ALDH18, ALDH19, and ALDH20 and represents such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group.
Probab=98.61 E-value=1.9e-08 Score=68.51 Aligned_cols=50 Identities=16% Similarity=0.016 Sum_probs=42.7
Q ss_pred CeeeeEEEEcCCCCCCCCCCCccccCC--CCCCCCcch-HHHHHhhhhccEEE
Q psy1588 2 RFVEGHSSNNRLISHTPVDTLPFGGVG--MSGMGAYHG-KYSFDTFTHRKSCL 51 (68)
Q Consensus 2 ~l~aG~V~IN~~~~~~~~~~~PfGG~k--~SG~G~~~g-~~~l~~~t~~k~v~ 51 (68)
++++|.|+||+...+.....+||||.| .||.|+++| ..++++|++.|++.
T Consensus 344 ~l~~G~v~vN~~~~~~~~~~~~~gg~~~~~SG~g~~~g~~~~~~~~~~~k~v~ 396 (397)
T cd07077 344 YIDTASFYPNESSKKGRGAFAGKGVERIVTSGMNNIFGAGVGHDALRPLKRLV 396 (397)
T ss_pred hCCEEEEEEeCCccCCCccccCCCcceEEEccccCCCCCCCChHHhcceeEee
Confidence 689999999988653223668999999 899999999 99999999999875
No 115
>KOG2454|consensus
Probab=98.60 E-value=2.3e-08 Score=69.36 Aligned_cols=53 Identities=28% Similarity=0.369 Sum_probs=45.6
Q ss_pred CCeeeeEEEEcCCCCCCCCCCCccccCCCCCCCCcchHHHHHhhhhccEEEEec
Q psy1588 1 MRFVEGHSSNNRLISHTPVDTLPFGGVGMSGMGAYHGKYSFDTFTHRKSCLVKD 54 (68)
Q Consensus 1 ~~l~aG~V~IN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~~~ 54 (68)
++|++|+|.||+-... .-.++||||+|.||+|+-.|.++++.-+..|+|...+
T Consensus 480 ~~lqtG~vAiNDFasf-Y~cQlPFGG~k~SGyGrFaG~EGLrg~Cn~Ksv~yd~ 532 (583)
T KOG2454|consen 480 SQLQTGVVAINDFASF-YMCQLPFGGVKDSGYGRFAGIEGLRGCCNVKSVAYDR 532 (583)
T ss_pred hhhhccceeehhhhhh-heeccccCCccCCCccccccHHHHHHHhcccceeccc
Confidence 3689999999996542 3468999999999999999999999999999996654
No 116
>cd07129 ALDH_KGSADH Alpha-Ketoglutaric Semialdehyde Dehydrogenase. Alpha-Ketoglutaric Semialdehyde (KGSA) Dehydrogenase (KGSADH, EC 1.2.1.26) catalyzes the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. This CD contains such sequences as those seen in Azospirillum brasilense, KGSADH-II (D-glucarate/D-galactarate-inducible) and KGSADH-III (hydroxy-L-proline-inducible). Both show similar high substrate specificity for KGSA and different coenzyme specificity; KGSADH-II is NAD+-dependent and KGSADH-III is NADP+-dependent. Also included in this CD is the NADP(+)-dependent aldehyde dehydrogenase from Vibrio harveyi which catalyzes the oxidation of long-chain aliphatic aldehydes to acids.
Probab=98.59 E-value=4.5e-08 Score=67.90 Aligned_cols=44 Identities=14% Similarity=0.122 Sum_probs=36.6
Q ss_pred eeeEEEEcCCCCCCCC--CCCcccc-CCCCCCCCc--chHHHHHhhhhcc
Q psy1588 4 VEGHSSNNRLISHTPV--DTLPFGG-VGMSGMGAY--HGKYSFDTFTHRK 48 (68)
Q Consensus 4 ~aG~V~IN~~~~~~~~--~~~PfGG-~k~SG~G~~--~g~~~l~~~t~~k 48 (68)
++|+|+||+.... .. +.+|||| +|.||+|++ .|.+++++||+.-
T Consensus 402 ~~G~v~iN~~~~~-~~~~~~~pfgG~~k~sg~g~~~~~g~~~~~~~~~~~ 450 (454)
T cd07129 402 KAGRLLFNGWPTG-VEVCPAMVHGGPYPATTDPRFTSVGTAAIERFLRPV 450 (454)
T ss_pred hCcEEEECCCCcc-ccccCCCCCCCCcCCCCCCccccccHHHHHHhcccc
Confidence 6999999976532 22 3789999 999999998 7899999999863
No 117
>cd07084 ALDH_KGSADH-like ALDH subfamily: NAD(P)+-dependent alpha-ketoglutaric semialdehyde dehydrogenases and plant delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12-like. ALDH subfamily which includes the NAD(P)+-dependent, alpha-ketoglutaric semialdehyde dehydrogenases (KGSADH, EC 1.2.1.26); plant delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12 ), ALDH family 12; the N-terminal domain of the MaoC (monoamine oxidase C) dehydratase regulatory protein; and orthologs of MaoC, PaaZ and PaaN, which are putative ring-opening enzymes of the aerobic phenylacetic acid catabolic pathway.
Probab=98.45 E-value=1.5e-07 Score=65.19 Aligned_cols=48 Identities=15% Similarity=0.056 Sum_probs=37.3
Q ss_pred Ce-eeeEEEEcCC-CCCCCCCCCcccc-CCCCCCCCcc-hHHHHHhhhhccEE
Q psy1588 2 RF-VEGHSSNNRL-ISHTPVDTLPFGG-VGMSGMGAYH-GKYSFDTFTHRKSC 50 (68)
Q Consensus 2 ~l-~aG~V~IN~~-~~~~~~~~~PfGG-~k~SG~G~~~-g~~~l~~~t~~k~v 50 (68)
+| ++|+|+||+. ... ..+..|||| .|.||+|++. |.+++++|++...+
T Consensus 389 ~l~~~G~v~iN~~~~~~-~~~~~~~gG~~k~sG~g~~~~g~~~~~~~~~~~~~ 440 (442)
T cd07084 389 NLWVAGRTYAILRGRTG-VAPNQNHGGGPAADPRGAGIGGPEAIKLVWRCHAE 440 (442)
T ss_pred HHHhcCeEEECCCCCCC-ccccccCCCCCCCCCCCccccchHHhhheeeeeee
Confidence 46 8999999976 221 345677766 8899999886 99999999987543
No 118
>PRK11809 putA trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed
Probab=98.35 E-value=5.8e-07 Score=69.17 Aligned_cols=49 Identities=27% Similarity=0.341 Sum_probs=39.6
Q ss_pred CCeeeeEEEEcCCCCCCCCCCCccccCCCCCCC-CcchHHHHHhhhhccE
Q psy1588 1 MRFVEGHSSNNRLISHTPVDTLPFGGVGMSGMG-AYHGKYSFDTFTHRKS 49 (68)
Q Consensus 1 ~~l~aG~V~IN~~~~~~~~~~~PfGG~k~SG~G-~~~g~~~l~~~t~~k~ 49 (68)
+++++|.|+||+...+......||||+|.||.| +.+|++++..|++.+.
T Consensus 1062 ~~l~aGnvyINr~~~gavvg~qPFGG~g~SG~G~kaGGp~yL~~f~~~~~ 1111 (1318)
T PRK11809 1062 GSAHVGNLYVNRNMVGAVVGVQPFGGEGLSGTGPKAGGPLYLYRLLATRP 1111 (1318)
T ss_pred HhCCEeEEEECCCCcCCCcCCCCCCCcCcCCCCCCCCCHHHHHHHhccCC
Confidence 368999999998765322234699999999999 5799999999998873
No 119
>PRK13805 bifunctional acetaldehyde-CoA/alcohol dehydrogenase; Provisional
Probab=98.14 E-value=9.1e-07 Score=65.54 Aligned_cols=53 Identities=15% Similarity=0.117 Sum_probs=44.6
Q ss_pred CCeeeeEEEEcCCCCC--------CCCCCCccccCCCCCCCCcchHHHHHhhhhccEEEEec
Q psy1588 1 MRFVEGHSSNNRLISH--------TPVDTLPFGGVGMSGMGAYHGKYSFDTFTHRKSCLVKD 54 (68)
Q Consensus 1 ~~l~aG~V~IN~~~~~--------~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~~~ 54 (68)
++|++|+|+||.++.. ...+.+|||+ +.||.|..+|..+++.|++.|.|..+.
T Consensus 391 ~~l~~g~v~vN~~~~~~~~~~~~~~~~~~~~fG~-G~~g~~~~~g~~g~~~~~~~k~v~~~~ 451 (862)
T PRK13805 391 LRMKACRILVNTPSSQGGIGDLYNKLAPSLTLGC-GSWGGNSVSENVGAKHLLNIKTVAKRR 451 (862)
T ss_pred hhCCccEEEEeCCccccccccccCCcCccccccc-cCCCCCcCCCCCCHHHhheeeeeeecc
Confidence 4789999999987521 1356789997 999999999999999999999988765
No 120
>cd07126 ALDH_F12_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12), family 12: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. P5CDH is a mitochondrial enzyme involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. The P5CDH, ALDH12A1 gene, in Arabidopsis, has been identified as an osmotic-stress-inducible ALDH gene. This CD contains both Viridiplantae and Alveolata P5CDH sequences.
Probab=97.97 E-value=5.9e-06 Score=58.27 Aligned_cols=37 Identities=16% Similarity=0.154 Sum_probs=28.2
Q ss_pred CeeeeE--EEEcCCCCCCCCCC---CccccCCCCCCCCcchHH
Q psy1588 2 RFVEGH--SSNNRLISHTPVDT---LPFGGVGMSGMGAYHGKY 39 (68)
Q Consensus 2 ~l~aG~--V~IN~~~~~~~~~~---~PfGG~k~SG~G~~~g~~ 39 (68)
++++|+ |+||+.+.. ...+ +||||+|+||+|++....
T Consensus 434 ~~~~G~~~v~~n~~~~~-~~~~~~~~pfgg~k~sg~g~~~~~~ 475 (489)
T cd07126 434 NTVNGTTYAGIRARTTG-APQNHWFGPAGDPRGAGIGTPEAIR 475 (489)
T ss_pred hCCcceEEEEecCCCCC-CCcccCcCCCCCCcccCCCCHhHHH
Confidence 689999 668877653 2333 999999999999886543
No 121
>cd07121 ALDH_EutE Ethanolamine utilization protein EutE-like. Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), converts acetaldehyde into acetyl-CoA. This CD is limited to such monofunctional enzymes as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium. Mutations in eutE abolish the ability to utilize ethanolamine as a carbon source.
Probab=97.80 E-value=8.1e-06 Score=56.59 Aligned_cols=33 Identities=18% Similarity=0.135 Sum_probs=26.3
Q ss_pred CCeeeeEEEEcCCCCCCCCCCCccccCCCCCC--CCcch
Q psy1588 1 MRFVEGHSSNNRLISHTPVDTLPFGGVGMSGM--GAYHG 37 (68)
Q Consensus 1 ~~l~aG~V~IN~~~~~~~~~~~PfGG~k~SG~--G~~~g 37 (68)
++|++|+|+||.+.. .++||||+|.|++ |...|
T Consensus 377 ~~l~aG~v~iN~~~~----~~~p~gG~k~s~~~~~~~~~ 411 (429)
T cd07121 377 RAMQTTIFVKNGPSY----AGLGVGGEGYTTFTIAGPTG 411 (429)
T ss_pred hhCCceEEEEcCCCc----CccccCCCccceEEecCCcC
Confidence 378999999997642 5789999999999 54434
No 122
>KOG2453|consensus
Probab=97.45 E-value=0.00018 Score=49.68 Aligned_cols=53 Identities=23% Similarity=0.233 Sum_probs=45.4
Q ss_pred eeeeEEEEcCCCCCCCCCCCccccCCCCCCCCcchHHHHHhhhhccEEEEeccc
Q psy1588 3 FVEGHSSNNRLISHTPVDTLPFGGVGMSGMGAYHGKYSFDTFTHRKSCLVKDYN 56 (68)
Q Consensus 3 l~aG~V~IN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~~~~~ 56 (68)
-++|.|.||.++.. ....-.|||-|..|-|++.|.+.+++|+++.+.++++..
T Consensus 444 sdcgivnvniptsg-aeiggafggek~tgggresgsdswkqymrrstctinysk 496 (507)
T KOG2453|consen 444 SDCGIVNVNIPTSG-AEIGGAFGGEKETGGGRESGSDSWKQYMRRSTCTINYSK 496 (507)
T ss_pred CccceEEecCCCCc-hhhcccccCccccCCCcccCchHHHHHHhhceeeeeccc
Confidence 36899999998763 345678999999999999999999999999999988643
No 123
>PRK15398 aldehyde dehydrogenase EutE; Provisional
Probab=97.25 E-value=7.1e-05 Score=52.50 Aligned_cols=48 Identities=13% Similarity=0.097 Sum_probs=33.2
Q ss_pred CCeeeeEEEEcCCCCCCCCCCCccccCCCCCCCCcchHHHHHhhhhccEEEEec
Q psy1588 1 MRFVEGHSSNNRLISHTPVDTLPFGGVGMSGMGAYHGKYSFDTFTHRKSCLVKD 54 (68)
Q Consensus 1 ~~l~aG~V~IN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~~~ 54 (68)
++|++|+|+||.+.. ..+||||.|.|.+-- .|+.| ...|..|++..++
T Consensus 407 ~~l~~G~V~iN~~~~----~~~p~gg~~~s~~~~-~~~~g-~~~~~~~~~~~~~ 454 (465)
T PRK15398 407 RAIQTSIFVKNGPSY----AGLGLGGEGFTTFTI-ATPTG-EGVTSARTFTRRR 454 (465)
T ss_pred HhCCceEEEECCCCc----cccCcCCCCCceeee-cccCC-CCccchhhhhhhe
Confidence 368999999998642 578999999998721 14444 5556666655443
No 124
>COG4230 Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion]
Probab=96.63 E-value=0.0014 Score=47.77 Aligned_cols=49 Identities=31% Similarity=0.417 Sum_probs=38.5
Q ss_pred CCeeeeEEEEcCCCCCCCCCCCccccCCCCCCC-CcchHHHHHhhhhccE
Q psy1588 1 MRFVEGHSSNNRLISHTPVDTLPFGGVGMSGMG-AYHGKYSFDTFTHRKS 49 (68)
Q Consensus 1 ~~l~aG~V~IN~~~~~~~~~~~PfGG~k~SG~G-~~~g~~~l~~~t~~k~ 49 (68)
+++++|.++||+-......-..||||.+.||.| +-+|+..+..+...+.
T Consensus 525 ~~~~aGNlYVNRN~vGAVVGVQPFGG~GLSGTGPKAGGp~YL~Rl~~~~p 574 (769)
T COG4230 525 ERAHAGNLYVNRNIVGAVVGVQPFGGEGLSGTGPKAGGPLYLLRLVSERP 574 (769)
T ss_pred hhccccceEeeccceeeEEeeccCCCCCCCCCCCCCCChHHHHHHHhcCC
Confidence 468999999998765322235699999999999 5688999988886654
No 125
>KOG2455|consensus
Probab=95.36 E-value=0.0035 Score=44.56 Aligned_cols=49 Identities=27% Similarity=0.319 Sum_probs=35.6
Q ss_pred CeeeeEEEEcCCCCCCCCCCCccccCCCCCCC-CcchHHHHHhhhhccEE
Q psy1588 2 RFVEGHSSNNRLISHTPVDTLPFGGVGMSGMG-AYHGKYSFDTFTHRKSC 50 (68)
Q Consensus 2 ~l~aG~V~IN~~~~~~~~~~~PfGG~k~SG~G-~~~g~~~l~~~t~~k~v 50 (68)
|..||..+||+-+.....-+.||||.+.||.- ..+|.+.+..|+-.+++
T Consensus 495 r~aAgNfYiNdKcTGsvvgqqpFGGaR~SGTNDKaGgp~~l~RwtSp~~i 544 (561)
T KOG2455|consen 495 RMAAGNFYINDKCTGSVVGQQPFGGARLSGTNDKAGGPHYLLRWTSPLSI 544 (561)
T ss_pred HhhhcceEEccccccceeeccccCcccccCCCCCCCCceEEEeecCcchh
Confidence 34689999999765322356899999999987 45677777777666544
No 126
>TIGR00407 proA gamma-glutamyl phosphate reductase. The prosite motif begins at residue 332 of the seed alignment although not all of the members of the family exactly obey the motif.
Probab=94.63 E-value=0.025 Score=39.17 Aligned_cols=46 Identities=15% Similarity=0.031 Sum_probs=30.1
Q ss_pred CCeeeeEEEEcCCCCCCCCCCCccccCCCC----CCCCcchHHHHHhhhhcc
Q psy1588 1 MRFVEGHSSNNRLISHTPVDTLPFGGVGMS----GMGAYHGKYSFDTFTHRK 48 (68)
Q Consensus 1 ~~l~aG~V~IN~~~~~~~~~~~PfGG~k~S----G~G~~~g~~~l~~~t~~k 48 (68)
+++++|.|+||++.. ..+..|||=-..- +-....|+-+++.+|+.|
T Consensus 349 ~~i~~G~v~iN~~~~--~~~~~pfG~~~~~~~~~~~~~~rg~~~~~~~~~~~ 398 (398)
T TIGR00407 349 NGVDSAAVYHNASTR--FTDGFRFGFGAEVGISTQKLHARGPMGLEALTSYK 398 (398)
T ss_pred HhCCeeEEEEeCCCC--cCCCcccccceeeEEecCCCcCCCCcCHHHhcCCC
Confidence 368999999999865 4556788721111 122345777888887765
No 127
>TIGR02518 EutH_ACDH acetaldehyde dehydrogenase (acetylating).
Probab=88.58 E-value=0.4 Score=34.08 Aligned_cols=50 Identities=16% Similarity=0.037 Sum_probs=30.5
Q ss_pred CCeeeeEEEEcCCCCC----CC-----CCCCccccCCCCCCCCcchHHHHHhhhhccEEEEe
Q psy1588 1 MRFVEGHSSNNRLISH----TP-----VDTLPFGGVGMSGMGAYHGKYSFDTFTHRKSCLVK 53 (68)
Q Consensus 1 ~~l~aG~V~IN~~~~~----~~-----~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~~ 53 (68)
+++++|.|+||++..+ .. ...+-||+++.++... .-+++.++..|.+...
T Consensus 386 ~~i~ag~V~VN~~~~~~~~Ga~t~~~~~~~~G~G~~~g~st~~---~v~~~~l~~~k~v~~~ 444 (488)
T TIGR02518 386 LKKPVSRMLVNTGGSLGGIGATTNLVPAFTLGCGAVGGSSTSD---NITPENLINIRRVAYG 444 (488)
T ss_pred HhCCeeEEEEcCCCcccccccccCCCccccccccccCCCcCCC---CCCHHHhheeeEEEec
Confidence 3689999999965321 00 1122367766665552 4457778888876544
No 128
>cd07122 ALDH_F20_ACDH Coenzyme A acylating aldehyde dehydrogenase (ACDH), ALDH family 20-like. Coenzyme A acylating aldehyde dehydrogenase (ACDH, EC=1.2.1.10), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA . The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH and may be critical enzymes in the fermentative pathway.
Probab=88.43 E-value=0.35 Score=33.99 Aligned_cols=14 Identities=14% Similarity=-0.002 Sum_probs=11.8
Q ss_pred CCeeeeEEEEcCCC
Q psy1588 1 MRFVEGHSSNNRLI 14 (68)
Q Consensus 1 ~~l~aG~V~IN~~~ 14 (68)
++|++|+|+||+++
T Consensus 377 ~~l~aG~V~IN~~~ 390 (436)
T cd07122 377 LRMPVSRILVNTPS 390 (436)
T ss_pred hhCCceEEEEeCCc
Confidence 37899999999864
No 129
>cd07081 ALDH_F20_ACDH_EutE-like Coenzyme A acylating aldehyde dehydrogenase (ACDH), Ethanolamine utilization protein EutE, and related proteins. Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA. The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH, and may be critical enzymes in the fermentative pathway.
Probab=88.34 E-value=0.3 Score=34.33 Aligned_cols=32 Identities=16% Similarity=0.012 Sum_probs=19.1
Q ss_pred CCeeeeEEEEcCCCCC-CCCCCCccccCCCCCC
Q psy1588 1 MRFVEGHSSNNRLISH-TPVDTLPFGGVGMSGM 32 (68)
Q Consensus 1 ~~l~aG~V~IN~~~~~-~~~~~~PfGG~k~SG~ 32 (68)
++|++|+|+||.++.. .....--|||++.+-+
T Consensus 379 ~~l~~G~V~iN~~~~~~~~g~~~~~~~~~~~~~ 411 (439)
T cd07081 379 NAMKTSRFVKNGPCSQGGLGDLYNFRGWPSMTL 411 (439)
T ss_pred hhCCceEEEEeCCccccccccccCCCCCeeEee
Confidence 3789999999976521 1112335666655533
No 130
>cd07127 ALDH_PAD-PaaZ Phenylacetic acid degradation proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida)-like. Phenylacetic acid degradation (PAD) proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida) are putative aromatic ring cleavage enzymes of the aerobic PA catabolic pathway. PaaZ mutants were defective for growth with PA as a sole carbon source due to interruption of the putative ring opening system. This CD is limited to bacterial monofunctional enzymes.
Probab=78.11 E-value=2.4 Score=30.79 Aligned_cols=44 Identities=11% Similarity=-0.022 Sum_probs=26.7
Q ss_pred eEEEEcCCCCCCCCCCCccccCCCCCCCC-cchHHHHHhhhhccE
Q psy1588 6 GHSSNNRLISHTPVDTLPFGGVGMSGMGA-YHGKYSFDTFTHRKS 49 (68)
Q Consensus 6 G~V~IN~~~~~~~~~~~PfGG~k~SG~G~-~~g~~~l~~~t~~k~ 49 (68)
|++.||+...-+..-.+||||.+.||.-. .+.......|...|-
T Consensus 498 ~~~~iN~tg~v~~~q~~~Fg~~~~sg~n~~a~~~~~~~~fv~~r~ 542 (549)
T cd07127 498 VALSINLTGGVFVNQSAAFSDFHGTGANPAANAALTDGAFVANRF 542 (549)
T ss_pred CcEEEcCCceEEEecCcCCCCCCCCCCCcccccccchhhhhhcce
Confidence 59999954321112236799999999863 344444555655443
No 131
>PF05475 Chlam_vir: Chlamydia virulence protein PGP3-D; InterPro: IPR008444 This family consists of Chlamydia virulence proteins which are thought to be required for the growth of these bacteria in mammalian cells []. Humans mount a humoral and mucosal immune response to plasmid protein pGP3 from Chlamydia trachomatis infections [, ]. This immune response to pGP3 in humans and animal models of chlamydia-induced disease has potential uses in diagnostic assays and protective immunisation strategies [].
Probab=30.97 E-value=25 Score=23.11 Aligned_cols=13 Identities=23% Similarity=0.064 Sum_probs=10.3
Q ss_pred CeeeeEEEEcCCC
Q psy1588 2 RFVEGHSSNNRLI 14 (68)
Q Consensus 2 ~l~aG~V~IN~~~ 14 (68)
.+++|.||||...
T Consensus 227 GmeSGVVWVNAl~ 239 (264)
T PF05475_consen 227 GMESGVVWVNALS 239 (264)
T ss_pred ccccceEEEEccC
Confidence 3689999999743
No 132
>PF08194 DIM: DIM protein; InterPro: IPR013172 Drosophila immune-induced molecules (DIMs) are short proteins induced during the immune response of Drosophila []. This entry includes DIMs 1 to 4 and DIM23.
Probab=30.58 E-value=29 Score=16.37 Aligned_cols=12 Identities=17% Similarity=-0.025 Sum_probs=9.2
Q ss_pred eeeeEEEEcCCC
Q psy1588 3 FVEGHSSNNRLI 14 (68)
Q Consensus 3 l~aG~V~IN~~~ 14 (68)
+.+|.|.||...
T Consensus 21 ~~pG~ViING~C 32 (36)
T PF08194_consen 21 ATPGNVIINGKC 32 (36)
T ss_pred CCCCeEEECcee
Confidence 458999999643
No 133
>TIGR02288 PaaN_2 phenylacetic acid degradation protein paaN. This family includes sequences from Burkholderia, Bordetella, Streptomyces. Other PaaN enzymes are represented by a separate model, TIGR02278.
Probab=25.26 E-value=64 Score=23.67 Aligned_cols=37 Identities=16% Similarity=0.200 Sum_probs=18.8
Q ss_pred eeeEEEEcCCCCCCCCCCCccccCCCCCCCC-cchHHHHHhhhhcc
Q psy1588 4 VEGHSSNNRLISHTPVDTLPFGGVGMSGMGA-YHGKYSFDTFTHRK 48 (68)
Q Consensus 4 ~aG~V~IN~~~~~~~~~~~PfGG~k~SG~G~-~~g~~~l~~~t~~k 48 (68)
++|.|+||. ..+|++.+.||.-. .+....-..|...|
T Consensus 504 ~~G~v~vN~--------~~~~~~~~~sg~n~~a~~~~~~~~~~~~r 541 (551)
T TIGR02288 504 LTGGVFVNQ--------SAAFSDFHGTGGNPAANASLSDGAFVANR 541 (551)
T ss_pred CCceEEEcc--------CCCCCCCCCCCCCCccCCcccchhhhhcc
Confidence 455555554 34667777776542 23333334454444
No 134
>COG0830 UreF Urease accessory protein UreF [Posttranslational modification, protein turnover, chaperones]
Probab=20.59 E-value=47 Score=21.81 Aligned_cols=28 Identities=14% Similarity=0.248 Sum_probs=19.1
Q ss_pred CCCCCccccCCCCCCCCcchHHHHHhhhhccEEEEe
Q psy1588 18 PVDTLPFGGVGMSGMGAYHGKYSFDTFTHRKSCLVK 53 (68)
Q Consensus 18 ~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~~ 53 (68)
.++.+|.|++.-| .|++.+.+...|.-.
T Consensus 14 ~dsafPvGafs~S--------~GLEtai~~g~V~d~ 41 (229)
T COG0830 14 ADSAFPVGAFSYS--------FGLETAIQAGIVTDA 41 (229)
T ss_pred cCccCCccccccc--------ccHHHHHHcCccCCH
Confidence 4678899998877 346666666655433
Done!