BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy15887
(104 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|193624928|ref|XP_001949221.1| PREDICTED: pituitary homeobox homolog Ptx1-like isoform 1
[Acyrthosiphon pisum]
gi|328705300|ref|XP_003242759.1| PREDICTED: pituitary homeobox homolog Ptx1-like isoform 2
[Acyrthosiphon pisum]
gi|328705302|ref|XP_003242760.1| PREDICTED: pituitary homeobox homolog Ptx1-like isoform 3
[Acyrthosiphon pisum]
Length = 429
Score = 108 bits (269), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 55/76 (72%), Positives = 59/76 (77%), Gaps = 2/76 (2%)
Query: 16 NIKTELSNHNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPD 75
IKTE + + KD+ N KN KN+KRQRRQRTHFTSQQLQELEATF RNRYPD
Sbjct: 138 GIKTEGIDTGVGVVTDDGKDA--NIKNNKNTKRQRRQRTHFTSQQLQELEATFTRNRYPD 195
Query: 76 MSTREEIAMWTNLTEA 91
MSTREEIAMWTNLTEA
Sbjct: 196 MSTREEIAMWTNLTEA 211
>gi|242017518|ref|XP_002429235.1| Pituitary homeobox, putative [Pediculus humanus corporis]
gi|212514124|gb|EEB16497.1| Pituitary homeobox, putative [Pediculus humanus corporis]
Length = 302
Score = 105 bits (263), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 57/80 (71%), Positives = 60/80 (75%), Gaps = 10/80 (12%)
Query: 12 PLIGNIKTELSNHNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARN 71
P I +IKTE S+E D K+ K SKRQRRQRTHFTSQQLQELEATFARN
Sbjct: 28 PNISSIKTE------SVETPETTDE----KDGKKSKRQRRQRTHFTSQQLQELEATFARN 77
Query: 72 RYPDMSTREEIAMWTNLTEA 91
RYPDMSTREEIAMWTNLTEA
Sbjct: 78 RYPDMSTREEIAMWTNLTEA 97
>gi|189234679|ref|XP_970167.2| PREDICTED: similar to pituitary homeobox1 [Tribolium castaneum]
Length = 517
Score = 105 bits (262), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 54/75 (72%), Positives = 57/75 (76%), Gaps = 7/75 (9%)
Query: 17 IKTELSNHNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDM 76
IKTE DS + + KN K +KRQRRQRTHFTSQQLQELEATFARNRYPDM
Sbjct: 142 IKTESGVGVDSTD-------GDDGKNDKKTKRQRRQRTHFTSQQLQELEATFARNRYPDM 194
Query: 77 STREEIAMWTNLTEA 91
STREEIAMWTNLTEA
Sbjct: 195 STREEIAMWTNLTEA 209
>gi|270002832|gb|EEZ99279.1| Ptx1 [Tribolium castaneum]
Length = 508
Score = 105 bits (262), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 54/75 (72%), Positives = 57/75 (76%), Gaps = 7/75 (9%)
Query: 17 IKTELSNHNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDM 76
IKTE DS + + KN K +KRQRRQRTHFTSQQLQELEATFARNRYPDM
Sbjct: 142 IKTESGVGVDSTD-------GDDGKNDKKTKRQRRQRTHFTSQQLQELEATFARNRYPDM 194
Query: 77 STREEIAMWTNLTEA 91
STREEIAMWTNLTEA
Sbjct: 195 STREEIAMWTNLTEA 209
>gi|357615722|gb|EHJ69804.1| pituitary homeobox1 [Danaus plexippus]
Length = 377
Score = 104 bits (259), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 54/75 (72%), Positives = 58/75 (77%), Gaps = 5/75 (6%)
Query: 17 IKTELSNHNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDM 76
IKTE + ++SS D K K +KRQRRQRTHFTSQQLQELEATFARNRYPDM
Sbjct: 114 IKTESTTPGVGPDESSLDD-----KGDKKNKRQRRQRTHFTSQQLQELEATFARNRYPDM 168
Query: 77 STREEIAMWTNLTEA 91
STREEIAMWTNLTEA
Sbjct: 169 STREEIAMWTNLTEA 183
>gi|198449449|ref|XP_001357586.2| GA13007 [Drosophila pseudoobscura pseudoobscura]
gi|198130612|gb|EAL26720.2| GA13007 [Drosophila pseudoobscura pseudoobscura]
Length = 588
Score = 103 bits (257), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 54/75 (72%), Positives = 59/75 (78%), Gaps = 2/75 (2%)
Query: 17 IKTELSNHNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDM 76
IKTE N ++S D S+ KN K +KRQRRQRTHFTSQQLQELE TF+RNRYPDM
Sbjct: 319 IKTE--NISNSGHDEPMTTSADEPKNDKKNKRQRRQRTHFTSQQLQELEHTFSRNRYPDM 376
Query: 77 STREEIAMWTNLTEA 91
STREEIAMWTNLTEA
Sbjct: 377 STREEIAMWTNLTEA 391
>gi|195159085|ref|XP_002020413.1| GL13525 [Drosophila persimilis]
gi|194117182|gb|EDW39225.1| GL13525 [Drosophila persimilis]
Length = 589
Score = 103 bits (257), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 54/75 (72%), Positives = 59/75 (78%), Gaps = 2/75 (2%)
Query: 17 IKTELSNHNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDM 76
IKTE N ++S D S+ KN K +KRQRRQRTHFTSQQLQELE TF+RNRYPDM
Sbjct: 320 IKTE--NISNSGHDEPMTTSADEPKNDKKNKRQRRQRTHFTSQQLQELEHTFSRNRYPDM 377
Query: 77 STREEIAMWTNLTEA 91
STREEIAMWTNLTEA
Sbjct: 378 STREEIAMWTNLTEA 392
>gi|195061200|ref|XP_001995944.1| GH14222 [Drosophila grimshawi]
gi|193891736|gb|EDV90602.1| GH14222 [Drosophila grimshawi]
Length = 499
Score = 103 bits (257), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 54/75 (72%), Positives = 59/75 (78%), Gaps = 2/75 (2%)
Query: 17 IKTELSNHNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDM 76
IKTE N ++S D S+ KN K +KRQRRQRTHFTSQQLQELE TF+RNRYPDM
Sbjct: 230 IKTE--NISNSGHDEPMTTSADEPKNDKKNKRQRRQRTHFTSQQLQELEHTFSRNRYPDM 287
Query: 77 STREEIAMWTNLTEA 91
STREEIAMWTNLTEA
Sbjct: 288 STREEIAMWTNLTEA 302
>gi|195113185|ref|XP_002001149.1| GI22129 [Drosophila mojavensis]
gi|193917743|gb|EDW16610.1| GI22129 [Drosophila mojavensis]
Length = 603
Score = 103 bits (257), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 54/75 (72%), Positives = 59/75 (78%), Gaps = 2/75 (2%)
Query: 17 IKTELSNHNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDM 76
IKTE N ++S D S+ KN K +KRQRRQRTHFTSQQLQELE TF+RNRYPDM
Sbjct: 334 IKTE--NISNSGHDEPMTTSADEPKNDKKNKRQRRQRTHFTSQQLQELEHTFSRNRYPDM 391
Query: 77 STREEIAMWTNLTEA 91
STREEIAMWTNLTEA
Sbjct: 392 STREEIAMWTNLTEA 406
>gi|195452834|ref|XP_002073520.1| GK14162 [Drosophila willistoni]
gi|194169605|gb|EDW84506.1| GK14162 [Drosophila willistoni]
Length = 751
Score = 103 bits (257), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 54/75 (72%), Positives = 59/75 (78%), Gaps = 2/75 (2%)
Query: 17 IKTELSNHNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDM 76
IKTE N ++S D S+ KN K +KRQRRQRTHFTSQQLQELE TF+RNRYPDM
Sbjct: 353 IKTE--NISNSGHDEPMTTSTDEPKNDKKNKRQRRQRTHFTSQQLQELEHTFSRNRYPDM 410
Query: 77 STREEIAMWTNLTEA 91
STREEIAMWTNLTEA
Sbjct: 411 STREEIAMWTNLTEA 425
>gi|195390899|ref|XP_002054104.1| GJ24250 [Drosophila virilis]
gi|194152190|gb|EDW67624.1| GJ24250 [Drosophila virilis]
Length = 709
Score = 103 bits (257), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 54/75 (72%), Positives = 59/75 (78%), Gaps = 2/75 (2%)
Query: 17 IKTELSNHNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDM 76
IKTE N ++S D S+ KN K +KRQRRQRTHFTSQQLQELE TF+RNRYPDM
Sbjct: 330 IKTE--NISNSGHDEPMTTSADEPKNDKKNKRQRRQRTHFTSQQLQELEHTFSRNRYPDM 387
Query: 77 STREEIAMWTNLTEA 91
STREEIAMWTNLTEA
Sbjct: 388 STREEIAMWTNLTEA 402
>gi|295798066|emb|CBL87030.1| ptx protein [Tribolium castaneum]
Length = 276
Score = 103 bits (257), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 53/75 (70%), Positives = 57/75 (76%), Gaps = 7/75 (9%)
Query: 17 IKTELSNHNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDM 76
IKTE DS + + KN K +KRQRRQRTHFTSQ+LQELEATFARNRYPDM
Sbjct: 23 IKTESGVGVDSTD-------GDDGKNDKKTKRQRRQRTHFTSQRLQELEATFARNRYPDM 75
Query: 77 STREEIAMWTNLTEA 91
STREEIAMWTNLTEA
Sbjct: 76 STREEIAMWTNLTEA 90
>gi|195505320|ref|XP_002099453.1| GE10911 [Drosophila yakuba]
gi|194185554|gb|EDW99165.1| GE10911 [Drosophila yakuba]
Length = 717
Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/75 (72%), Positives = 57/75 (76%), Gaps = 2/75 (2%)
Query: 17 IKTELSNHNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDM 76
IKTE N + S D S KN K +KRQRRQRTHFTSQQLQELE TF+RNRYPDM
Sbjct: 355 IKTE--NISSSGHDEPMTTSGEEPKNDKKNKRQRRQRTHFTSQQLQELEHTFSRNRYPDM 412
Query: 77 STREEIAMWTNLTEA 91
STREEIAMWTNLTEA
Sbjct: 413 STREEIAMWTNLTEA 427
>gi|194905149|ref|XP_001981137.1| GG11784 [Drosophila erecta]
gi|190655775|gb|EDV53007.1| GG11784 [Drosophila erecta]
Length = 597
Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/75 (72%), Positives = 57/75 (76%), Gaps = 2/75 (2%)
Query: 17 IKTELSNHNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDM 76
IKTE N + S D S KN K +KRQRRQRTHFTSQQLQELE TF+RNRYPDM
Sbjct: 234 IKTE--NISSSGHDEPMTTSGEEPKNDKKNKRQRRQRTHFTSQQLQELEHTFSRNRYPDM 291
Query: 77 STREEIAMWTNLTEA 91
STREEIAMWTNLTEA
Sbjct: 292 STREEIAMWTNLTEA 306
>gi|195341650|ref|XP_002037419.1| GM12914 [Drosophila sechellia]
gi|194131535|gb|EDW53578.1| GM12914 [Drosophila sechellia]
Length = 621
Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/75 (72%), Positives = 57/75 (76%), Gaps = 2/75 (2%)
Query: 17 IKTELSNHNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDM 76
IKTE N + S D S KN K +KRQRRQRTHFTSQQLQELE TF+RNRYPDM
Sbjct: 249 IKTE--NISSSGHDEPMTTSGEEPKNDKKNKRQRRQRTHFTSQQLQELEHTFSRNRYPDM 306
Query: 77 STREEIAMWTNLTEA 91
STREEIAMWTNLTEA
Sbjct: 307 STREEIAMWTNLTEA 321
>gi|170053388|ref|XP_001862650.1| homeobox protein [Culex quinquefasciatus]
gi|167873959|gb|EDS37342.1| homeobox protein [Culex quinquefasciatus]
Length = 644
Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/80 (65%), Positives = 62/80 (77%), Gaps = 5/80 (6%)
Query: 16 NIKTELSNHND----SIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARN 71
NI + +S H+D +I D+ ++ +KN K +KRQRRQRTHFTSQQL ELE TF+RN
Sbjct: 299 NISSGMS-HDDGGGTTIADNGDGNAGPATKNDKKNKRQRRQRTHFTSQQLHELEQTFSRN 357
Query: 72 RYPDMSTREEIAMWTNLTEA 91
RYPDMSTREEIAMWTNLTEA
Sbjct: 358 RYPDMSTREEIAMWTNLTEA 377
>gi|195575199|ref|XP_002105567.1| GD21552 [Drosophila simulans]
gi|194201494|gb|EDX15070.1| GD21552 [Drosophila simulans]
Length = 592
Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/75 (72%), Positives = 57/75 (76%), Gaps = 2/75 (2%)
Query: 17 IKTELSNHNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDM 76
IKTE N + S D S KN K +KRQRRQRTHFTSQQLQELE TF+RNRYPDM
Sbjct: 234 IKTE--NISSSGHDEPMTTSGEEPKNDKKNKRQRRQRTHFTSQQLQELEHTFSRNRYPDM 291
Query: 77 STREEIAMWTNLTEA 91
STREEIAMWTNLTEA
Sbjct: 292 STREEIAMWTNLTEA 306
>gi|194765091|ref|XP_001964661.1| GF22931 [Drosophila ananassae]
gi|190614933|gb|EDV30457.1| GF22931 [Drosophila ananassae]
Length = 605
Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/75 (72%), Positives = 57/75 (76%), Gaps = 2/75 (2%)
Query: 17 IKTELSNHNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDM 76
IKTE N + S D S KN K +KRQRRQRTHFTSQQLQELE TF+RNRYPDM
Sbjct: 330 IKTE--NISSSGHDEPMTTSGEEPKNDKKNKRQRRQRTHFTSQQLQELEHTFSRNRYPDM 387
Query: 77 STREEIAMWTNLTEA 91
STREEIAMWTNLTEA
Sbjct: 388 STREEIAMWTNLTEA 402
>gi|28571942|ref|NP_733410.2| Ptx1, isoform A [Drosophila melanogaster]
gi|38258871|sp|O18400.2|PITX_DROME RecName: Full=Pituitary homeobox homolog Ptx1; Short=D-PTX1
gi|28381509|gb|AAF57099.3| Ptx1, isoform A [Drosophila melanogaster]
gi|33589384|gb|AAQ22459.1| RE41906p [Drosophila melanogaster]
gi|220955692|gb|ACL90389.1| Ptx1-PA [synthetic construct]
Length = 509
Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/75 (72%), Positives = 57/75 (76%), Gaps = 2/75 (2%)
Query: 17 IKTELSNHNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDM 76
IKTE N + S D S KN K +KRQRRQRTHFTSQQLQELE TF+RNRYPDM
Sbjct: 234 IKTE--NISSSGHDEPMTTSGEEPKNDKKNKRQRRQRTHFTSQQLQELEHTFSRNRYPDM 291
Query: 77 STREEIAMWTNLTEA 91
STREEIAMWTNLTEA
Sbjct: 292 STREEIAMWTNLTEA 306
>gi|442621993|ref|NP_001138130.2| Ptx1, isoform E [Drosophila melanogaster]
gi|440218093|gb|ACL83586.2| Ptx1, isoform E [Drosophila melanogaster]
Length = 610
Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/75 (72%), Positives = 57/75 (76%), Gaps = 2/75 (2%)
Query: 17 IKTELSNHNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDM 76
IKTE N + S D S KN K +KRQRRQRTHFTSQQLQELE TF+RNRYPDM
Sbjct: 234 IKTE--NISSSGHDEPMTTSGEEPKNDKKNKRQRRQRTHFTSQQLQELEHTFSRNRYPDM 291
Query: 77 STREEIAMWTNLTEA 91
STREEIAMWTNLTEA
Sbjct: 292 STREEIAMWTNLTEA 306
>gi|148298661|ref|NP_001091838.1| pituitary homeobox1 [Bombyx mori]
gi|121582239|dbj|BAF44479.1| pituitary homeobox1 [Bombyx mori]
Length = 387
Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 53/75 (70%), Positives = 57/75 (76%), Gaps = 5/75 (6%)
Query: 17 IKTELSNHNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDM 76
IKTE + E+ + D K K +KRQRRQRTHFTSQQLQELEATFARNRYPDM
Sbjct: 119 IKTESTTPGVGPEEPNLDD-----KGDKKNKRQRRQRTHFTSQQLQELEATFARNRYPDM 173
Query: 77 STREEIAMWTNLTEA 91
STREEIAMWTNLTEA
Sbjct: 174 STREEIAMWTNLTEA 188
>gi|45553794|ref|NP_996314.1| Ptx1, isoform C [Drosophila melanogaster]
gi|45446722|gb|AAS65234.1| Ptx1, isoform C [Drosophila melanogaster]
Length = 514
Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/75 (72%), Positives = 57/75 (76%), Gaps = 2/75 (2%)
Query: 17 IKTELSNHNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDM 76
IKTE N + S D S KN K +KRQRRQRTHFTSQQLQELE TF+RNRYPDM
Sbjct: 239 IKTE--NISSSGHDEPMTTSGEEPKNDKKNKRQRRQRTHFTSQQLQELEHTFSRNRYPDM 296
Query: 77 STREEIAMWTNLTEA 91
STREEIAMWTNLTEA
Sbjct: 297 STREEIAMWTNLTEA 311
>gi|170061749|ref|XP_001866371.1| homeobox protein [Culex quinquefasciatus]
gi|167879868|gb|EDS43251.1| homeobox protein [Culex quinquefasciatus]
Length = 624
Score = 102 bits (254), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 54/83 (65%), Positives = 63/83 (75%), Gaps = 8/83 (9%)
Query: 16 NIKTELSNHND----SIEDSSAKDSSSN---SKNTKNSKRQRRQRTHFTSQQLQELEATF 68
NI + +S H+D +I D+ D +S +KN K +KRQRRQRTHFTSQQL ELE TF
Sbjct: 206 NISSGMS-HDDGGGTTIADNGTGDGNSGGPATKNDKKNKRQRRQRTHFTSQQLHELEQTF 264
Query: 69 ARNRYPDMSTREEIAMWTNLTEA 91
+RNRYPDMSTREEIAMWTNLTEA
Sbjct: 265 SRNRYPDMSTREEIAMWTNLTEA 287
>gi|28571944|ref|NP_788770.1| Ptx1, isoform B [Drosophila melanogaster]
gi|28381510|gb|AAO41617.1| Ptx1, isoform B [Drosophila melanogaster]
Length = 318
Score = 102 bits (253), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 54/75 (72%), Positives = 57/75 (76%), Gaps = 2/75 (2%)
Query: 17 IKTELSNHNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDM 76
IKTE N + S D S KN K +KRQRRQRTHFTSQQLQELE TF+RNRYPDM
Sbjct: 43 IKTE--NISSSGHDEPMTTSGEEPKNDKKNKRQRRQRTHFTSQQLQELEHTFSRNRYPDM 100
Query: 77 STREEIAMWTNLTEA 91
STREEIAMWTNLTEA
Sbjct: 101 STREEIAMWTNLTEA 115
>gi|49115583|gb|AAH73479.1| Pitx2-A protein [Xenopus laevis]
Length = 323
Score = 101 bits (251), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 58/89 (65%), Positives = 62/89 (69%), Gaps = 14/89 (15%)
Query: 15 GNIKTELSNHNDSIEDSSA-----KDSSSNSKNTKNS-------KRQRRQRTHFTSQQLQ 62
G K L H +I D+S+ KD S SKN NS KRQRRQRTHFTSQQLQ
Sbjct: 49 GECKPRLEVH--TISDTSSPEAADKDKSHQSKNEDNSTDDPSKKKRQRRQRTHFTSQQLQ 106
Query: 63 ELEATFARNRYPDMSTREEIAMWTNLTEA 91
ELEATF RNRYPDMSTREEIA+WTNLTEA
Sbjct: 107 ELEATFQRNRYPDMSTREEIAVWTNLTEA 135
>gi|347963348|ref|XP_310944.5| AGAP000190-PA [Anopheles gambiae str. PEST]
gi|333467242|gb|EAA06466.6| AGAP000190-PA [Anopheles gambiae str. PEST]
Length = 493
Score = 101 bits (251), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 46/58 (79%), Positives = 51/58 (87%)
Query: 34 KDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
+D + +KN K +KRQRRQRTHFTSQQL ELE TF+RNRYPDMSTREEIAMWTNLTEA
Sbjct: 233 QDGTDGTKNDKKNKRQRRQRTHFTSQQLHELEQTFSRNRYPDMSTREEIAMWTNLTEA 290
>gi|17380174|sp|Q9PWR3.1|PITX2_XENLA RecName: Full=Pituitary homeobox 2; AltName: Full=Homeobox protein
PITX2; AltName: Full=Paired-like homeodomain
transcription factor 2; AltName: Full=xPtx2
gi|3955069|emb|CAA06696.1| XPtx2a [Xenopus laevis]
Length = 326
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/87 (63%), Positives = 62/87 (71%), Gaps = 10/87 (11%)
Query: 15 GNIKTELSNH---NDSIEDSSAKDSSSNSKNTKNS-------KRQRRQRTHFTSQQLQEL 64
G K+ L H + S D++ KD S +KN +S KRQRRQRTHFTSQQLQEL
Sbjct: 50 GECKSRLEVHTISDTSSPDTADKDKSHQTKNEDSSTDDPSKKKRQRRQRTHFTSQQLQEL 109
Query: 65 EATFARNRYPDMSTREEIAMWTNLTEA 91
EATF RNRYPDMSTREEIA+WTNLTEA
Sbjct: 110 EATFQRNRYPDMSTREEIAVWTNLTEA 136
>gi|148234542|ref|NP_001081756.1| paired-like homeodomain 2 [Xenopus laevis]
gi|3406613|gb|AAC29426.1| homeodomain transcription factor Pitx2 [Xenopus laevis]
Length = 326
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/87 (63%), Positives = 62/87 (71%), Gaps = 10/87 (11%)
Query: 15 GNIKTELSNH---NDSIEDSSAKDSSSNSKNTKNS-------KRQRRQRTHFTSQQLQEL 64
G K+ L H + S D++ KD S +KN +S KRQRRQRTHFTSQQLQEL
Sbjct: 50 GECKSRLEVHTISDTSSPDTADKDKSHQTKNEDSSTDDPSKKKRQRRQRTHFTSQQLQEL 109
Query: 65 EATFARNRYPDMSTREEIAMWTNLTEA 91
EATF RNRYPDMSTREEIA+WTNLTEA
Sbjct: 110 EATFQRNRYPDMSTREEIAVWTNLTEA 136
>gi|62857711|ref|NP_001017227.1| paired-like homeodomain 2 [Xenopus (Silurana) tropicalis]
gi|166796151|gb|AAI59023.1| paired-like homeodomain 2 [Xenopus (Silurana) tropicalis]
Length = 345
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/89 (64%), Positives = 62/89 (69%), Gaps = 14/89 (15%)
Query: 15 GNIKTELSNHNDSIEDSSA-----KDSSSNSKNTKNS-------KRQRRQRTHFTSQQLQ 62
G K L H +I D+S+ KD S SKN +S KRQRRQRTHFTSQQLQ
Sbjct: 69 GECKARLEVH--TISDTSSPEAADKDKSHQSKNEDSSTDDPSKKKRQRRQRTHFTSQQLQ 126
Query: 63 ELEATFARNRYPDMSTREEIAMWTNLTEA 91
ELEATF RNRYPDMSTREEIA+WTNLTEA
Sbjct: 127 ELEATFQRNRYPDMSTREEIAVWTNLTEA 155
>gi|6679341|ref|NP_032878.1| pituitary homeobox 3 [Mus musculus]
gi|3122612|sp|O35160.1|PITX3_MOUSE RecName: Full=Pituitary homeobox 3; AltName: Full=Homeobox protein
PITX3; AltName: Full=Paired-like homeodomain
transcription factor 3
gi|2645427|gb|AAB87380.1| homeobox protein Pitx3 [Mus musculus]
gi|111308398|gb|AAI20845.1| Paired-like homeodomain transcription factor 3 [Mus musculus]
gi|223460982|gb|AAI37811.1| Paired-like homeodomain transcription factor 3 [Mus musculus]
Length = 302
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 48/68 (70%), Positives = 55/68 (80%), Gaps = 1/68 (1%)
Query: 24 HNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIA 83
H+DS E +SA + ++ K+QRRQRTHFTSQQLQELEATF RNRYPDMSTREEIA
Sbjct: 38 HSDS-EKASASLPGGSPEDGSLKKKQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIA 96
Query: 84 MWTNLTEA 91
+WTNLTEA
Sbjct: 97 VWTNLTEA 104
>gi|9507015|ref|NP_062120.1| pituitary homeobox 3 [Rattus norvegicus]
gi|6226672|sp|P81062.2|PITX3_RAT RecName: Full=Pituitary homeobox 3; AltName: Full=Homeobox protein
PITX3; AltName: Full=Paired-like homeodomain
transcription factor 3
gi|4572639|emb|CAA09455.2| Ptx3 protein [Rattus norvegicus]
gi|149040298|gb|EDL94336.1| paired-like homeodomain transcription factor 3, isoform CRA_a
[Rattus norvegicus]
gi|149040299|gb|EDL94337.1| paired-like homeodomain transcription factor 3, isoform CRA_a
[Rattus norvegicus]
Length = 302
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 48/68 (70%), Positives = 55/68 (80%), Gaps = 1/68 (1%)
Query: 24 HNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIA 83
H+DS E +SA + ++ K+QRRQRTHFTSQQLQELEATF RNRYPDMSTREEIA
Sbjct: 38 HSDS-EKASASLPGGSPEDGSLKKKQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIA 96
Query: 84 MWTNLTEA 91
+WTNLTEA
Sbjct: 97 VWTNLTEA 104
>gi|147898431|ref|NP_001079055.1| paired-like homeodomain 2 [Xenopus laevis]
gi|3955071|emb|CAA06697.1| XPtx2b [Xenopus laevis]
Length = 316
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/70 (74%), Positives = 54/70 (77%), Gaps = 7/70 (10%)
Query: 29 EDSSAKDSSSNSKNTKNS-------KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREE 81
+ S KD S SKN NS KRQRRQRTHFTSQQLQELEATF RNRYPDMSTREE
Sbjct: 59 QSGSDKDKSHQSKNEDNSTDDPSKKKRQRRQRTHFTSQQLQELEATFQRNRYPDMSTREE 118
Query: 82 IAMWTNLTEA 91
IA+WTNLTEA
Sbjct: 119 IAVWTNLTEA 128
>gi|432113039|gb|ELK35617.1| Pituitary homeobox 3 [Myotis davidii]
Length = 270
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 48/68 (70%), Positives = 55/68 (80%), Gaps = 1/68 (1%)
Query: 24 HNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIA 83
H+DS E +SA + ++ K+QRRQRTHFTSQQLQELEATF RNRYPDMSTREEIA
Sbjct: 59 HSDS-EKASASLPGGSPEDGSLKKKQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIA 117
Query: 84 MWTNLTEA 91
+WTNLTEA
Sbjct: 118 VWTNLTEA 125
>gi|431895492|gb|ELK05008.1| Pituitary homeobox 3 [Pteropus alecto]
Length = 302
Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 48/68 (70%), Positives = 55/68 (80%), Gaps = 1/68 (1%)
Query: 24 HNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIA 83
H+DS E +SA + ++ K+QRRQRTHFTSQQLQELEATF RNRYPDMSTREEIA
Sbjct: 38 HSDS-EKASASLPGGSPEDGSLKKKQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIA 96
Query: 84 MWTNLTEA 91
+WTNLTEA
Sbjct: 97 VWTNLTEA 104
>gi|374533822|gb|AEZ53824.1| paired-like homeodomain 2, partial [Spea bombifrons]
Length = 250
Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 48/66 (72%), Positives = 54/66 (81%)
Query: 26 DSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMW 85
D + S+K+ SN+ + KRQRRQRTHFTSQQLQELEATF RNRYPDMSTREEIA+W
Sbjct: 13 DKDKSHSSKNEDSNADDPSKKKRQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVW 72
Query: 86 TNLTEA 91
TNLTEA
Sbjct: 73 TNLTEA 78
>gi|4826912|ref|NP_005020.1| pituitary homeobox 3 [Homo sapiens]
gi|114632532|ref|XP_521591.2| PREDICTED: pituitary homeobox 3 [Pan troglodytes]
gi|297687264|ref|XP_002821135.1| PREDICTED: pituitary homeobox 3 [Pongo abelii]
gi|332212662|ref|XP_003255438.1| PREDICTED: pituitary homeobox 3 [Nomascus leucogenys]
gi|426366014|ref|XP_004050060.1| PREDICTED: pituitary homeobox 3 [Gorilla gorilla gorilla]
gi|6093723|sp|O75364.1|PITX3_HUMAN RecName: Full=Pituitary homeobox 3; AltName: Full=Homeobox protein
PITX3; AltName: Full=Paired-like homeodomain
transcription factor 3
gi|3258633|gb|AAC24502.1| homeodomain protein [Homo sapiens]
gi|15079651|gb|AAH11642.1| Paired-like homeodomain 3 [Homo sapiens]
gi|123982084|gb|ABM82871.1| paired-like homeodomain transcription factor 3 [synthetic
construct]
gi|123996913|gb|ABM86058.1| paired-like homeodomain transcription factor 3 [synthetic
construct]
gi|208966992|dbj|BAG73510.1| paired-like homeodomain 3 [synthetic construct]
gi|410335095|gb|JAA36494.1| paired-like homeodomain 3 [Pan troglodytes]
Length = 302
Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 48/68 (70%), Positives = 55/68 (80%), Gaps = 1/68 (1%)
Query: 24 HNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIA 83
H+DS E +SA + ++ K+QRRQRTHFTSQQLQELEATF RNRYPDMSTREEIA
Sbjct: 38 HSDS-EKASASLPGGSPEDGSLKKKQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIA 96
Query: 84 MWTNLTEA 91
+WTNLTEA
Sbjct: 97 VWTNLTEA 104
>gi|123996911|gb|ABM86057.1| paired-like homeodomain transcription factor 3 [synthetic
construct]
Length = 302
Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 48/68 (70%), Positives = 55/68 (80%), Gaps = 1/68 (1%)
Query: 24 HNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIA 83
H+DS E +SA + ++ K+QRRQRTHFTSQQLQELEATF RNRYPDMSTREEIA
Sbjct: 38 HSDS-EKASASLPGGSPEDGSLKKKQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIA 96
Query: 84 MWTNLTEA 91
+WTNLTEA
Sbjct: 97 VWTNLTEA 104
>gi|390473313|ref|XP_002756598.2| PREDICTED: LOW QUALITY PROTEIN: pituitary homeobox 3 [Callithrix
jacchus]
Length = 370
Score = 99.0 bits (245), Expect = 3e-19, Method: Composition-based stats.
Identities = 48/68 (70%), Positives = 55/68 (80%), Gaps = 1/68 (1%)
Query: 24 HNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIA 83
H+DS E +SA + ++ K+QRRQRTHFTSQQLQELEATF RNRYPDMSTREEIA
Sbjct: 106 HSDS-EKASASLPGGSPEDGSLKKKQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIA 164
Query: 84 MWTNLTEA 91
+WTNLTEA
Sbjct: 165 VWTNLTEA 172
>gi|281352063|gb|EFB27647.1| hypothetical protein PANDA_001770 [Ailuropoda melanoleuca]
Length = 303
Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 48/68 (70%), Positives = 55/68 (80%), Gaps = 1/68 (1%)
Query: 24 HNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIA 83
H+DS E +SA + ++ K+QRRQRTHFTSQQLQELEATF RNRYPDMSTREEIA
Sbjct: 38 HSDS-EKASASLPGGSPEDGSLKKKQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIA 96
Query: 84 MWTNLTEA 91
+WTNLTEA
Sbjct: 97 VWTNLTEA 104
>gi|402881335|ref|XP_003904229.1| PREDICTED: pituitary homeobox 3 [Papio anubis]
Length = 302
Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 48/68 (70%), Positives = 55/68 (80%), Gaps = 1/68 (1%)
Query: 24 HNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIA 83
H+DS E +SA + ++ K+QRRQRTHFTSQQLQELEATF RNRYPDMSTREEIA
Sbjct: 38 HSDS-EKASASLPGGSPEDGTLKKKQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIA 96
Query: 84 MWTNLTEA 91
+WTNLTEA
Sbjct: 97 VWTNLTEA 104
>gi|149689716|ref|XP_001499185.1| PREDICTED: pituitary homeobox 3-like [Equus caballus]
Length = 302
Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 48/68 (70%), Positives = 55/68 (80%), Gaps = 1/68 (1%)
Query: 24 HNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIA 83
H+DS E +SA + ++ K+QRRQRTHFTSQQLQELEATF RNRYPDMSTREEIA
Sbjct: 38 HSDS-EKASASLPGGSPEDGSLKKKQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIA 96
Query: 84 MWTNLTEA 91
+WTNLTEA
Sbjct: 97 VWTNLTEA 104
>gi|2398591|emb|CAA04801.1| Ptx1 homeodomain protein [Drosophila melanogaster]
Length = 513
Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 53/75 (70%), Positives = 56/75 (74%), Gaps = 2/75 (2%)
Query: 17 IKTELSNHNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDM 76
IKTE N + S D S KN K +KRQRRQRTHFTSQQLQELE T +RNRYPDM
Sbjct: 238 IKTE--NISSSGHDEPMTTSGEEPKNDKKNKRQRRQRTHFTSQQLQELEHTSSRNRYPDM 295
Query: 77 STREEIAMWTNLTEA 91
STREEIAMWTNLTEA
Sbjct: 296 STREEIAMWTNLTEA 310
>gi|397510722|ref|XP_003825740.1| PREDICTED: LOW QUALITY PROTEIN: pituitary homeobox 3 [Pan paniscus]
Length = 310
Score = 99.0 bits (245), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 48/68 (70%), Positives = 55/68 (80%), Gaps = 1/68 (1%)
Query: 24 HNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIA 83
H+DS E +SA + ++ K+QRRQRTHFTSQQLQELEATF RNRYPDMSTREEIA
Sbjct: 108 HSDS-EKASASLPGGSPEDGSLKKKQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIA 166
Query: 84 MWTNLTEA 91
+WTNLTEA
Sbjct: 167 VWTNLTEA 174
>gi|342837528|dbj|BAK57345.1| pituitary homeobox 2 [Scyliorhinus torazame]
Length = 338
Score = 98.6 bits (244), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 51/74 (68%), Positives = 57/74 (77%), Gaps = 3/74 (4%)
Query: 21 LSNHNDSIEDSS---AKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMS 77
L +H DS E +K+ SN+ + KRQRRQRTHFTSQQLQELEATF RNRYPDMS
Sbjct: 75 LRHHLDSHEKEKNLQSKNDDSNTDDPSKKKRQRRQRTHFTSQQLQELEATFQRNRYPDMS 134
Query: 78 TREEIAMWTNLTEA 91
TREEIA+WTNLTEA
Sbjct: 135 TREEIAVWTNLTEA 148
>gi|185132202|ref|NP_001117152.1| paired-like homeodomain transcription factor 2alpha [Salmo salar]
gi|158380239|gb|ABW37416.1| paired-like homeodomain transcription factor 2alpha [Salmo salar]
Length = 322
Score = 98.2 bits (243), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 52/71 (73%), Positives = 54/71 (76%), Gaps = 6/71 (8%)
Query: 27 SIEDSSAKDSSSNSKNTKNS------KRQRRQRTHFTSQQLQELEATFARNRYPDMSTRE 80
S S KDS SKN +S KRQRRQRTHFTSQQLQELEATF RNRYPDMSTRE
Sbjct: 62 SSPGSVEKDSKGQSKNDGSSDDPSKKKRQRRQRTHFTSQQLQELEATFQRNRYPDMSTRE 121
Query: 81 EIAMWTNLTEA 91
EIA+WTNLTEA
Sbjct: 122 EIAVWTNLTEA 132
>gi|391336511|ref|XP_003742623.1| PREDICTED: uncharacterized protein LOC100903936 [Metaseiulus
occidentalis]
Length = 521
Score = 97.8 bits (242), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 44/45 (97%), Positives = 45/45 (100%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
KRQRRQRTHFTSQQLQELEATF+RNRYPDMSTREEIAMWTNLTEA
Sbjct: 260 KRQRRQRTHFTSQQLQELEATFSRNRYPDMSTREEIAMWTNLTEA 304
>gi|157117543|ref|XP_001658818.1| homeobox protein [Aedes aegypti]
gi|108876010|gb|EAT40235.1| AAEL008022-PA [Aedes aegypti]
Length = 482
Score = 97.8 bits (242), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 45/51 (88%), Positives = 47/51 (92%)
Query: 41 KNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
KN K +KRQRRQRTHFTSQQL ELE TF+RNRYPDMSTREEIAMWTNLTEA
Sbjct: 230 KNDKKNKRQRRQRTHFTSQQLHELEQTFSRNRYPDMSTREEIAMWTNLTEA 280
>gi|185133870|ref|NP_001117175.1| paired-like homeodomain transcription factor 2alphaA [Salmo
salar]
gi|158380247|gb|ABW37420.1| paired-like homeodomain transcription factor 2alphaA [Salmo
salar]
Length = 270
Score = 97.8 bits (242), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 50/64 (78%), Positives = 52/64 (81%), Gaps = 6/64 (9%)
Query: 34 KDSSSNSKNTKNS------KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTN 87
KDS SKN +S KRQRRQRTHFTSQQLQELEATF RNRYPDMSTREEIA+WTN
Sbjct: 17 KDSKGQSKNDDSSDDPSKKKRQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTN 76
Query: 88 LTEA 91
LTEA
Sbjct: 77 LTEA 80
>gi|295844825|ref|NP_001171524.1| pituitary homeobox 3 [Ovis aries]
gi|284919778|emb|CBA10128.1| paired-like homeodomain 3 [Ovis aries]
gi|295016061|emb|CBA10129.1| paired-like homeodomain 3 [Ovis aries]
gi|295016063|emb|CBA10130.1| paired-like homeodomain 3 [Ovis aries]
gi|295016065|emb|CBA10131.1| paired-like homeodomain 3 [Ovis aries]
Length = 302
Score = 97.8 bits (242), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 47/68 (69%), Positives = 54/68 (79%), Gaps = 1/68 (1%)
Query: 24 HNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIA 83
H+DS E +S + ++ K+QRRQRTHFTSQQLQELEATF RNRYPDMSTREEIA
Sbjct: 38 HSDS-EKASVSLPGGSPEDGSLKKKQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIA 96
Query: 84 MWTNLTEA 91
+WTNLTEA
Sbjct: 97 VWTNLTEA 104
>gi|432901826|ref|XP_004076966.1| PREDICTED: pituitary homeobox 3-like [Oryzias latipes]
Length = 294
Score = 97.8 bits (242), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 52/76 (68%), Positives = 59/76 (77%), Gaps = 8/76 (10%)
Query: 16 NIKTELSNHNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPD 75
N TE S H + +++SSA+D S K+QRRQRTHFTSQQLQELEATF RNRYPD
Sbjct: 35 NSDTEKS-HQNQLDESSAEDGSLK-------KKQRRQRTHFTSQQLQELEATFQRNRYPD 86
Query: 76 MSTREEIAMWTNLTEA 91
MSTREEIA+WTNLTEA
Sbjct: 87 MSTREEIAVWTNLTEA 102
>gi|300796563|ref|NP_001179234.1| pituitary homeobox 3 [Bos taurus]
gi|296472793|tpg|DAA14908.1| TPA: paired-like homeodomain 3-like [Bos taurus]
Length = 302
Score = 97.8 bits (242), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 47/68 (69%), Positives = 54/68 (79%), Gaps = 1/68 (1%)
Query: 24 HNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIA 83
H+DS E +S + ++ K+QRRQRTHFTSQQLQELEATF RNRYPDMSTREEIA
Sbjct: 38 HSDS-EKASVSLPGGSPEDGSLKKKQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIA 96
Query: 84 MWTNLTEA 91
+WTNLTEA
Sbjct: 97 VWTNLTEA 104
>gi|321456225|gb|EFX67338.1| hypothetical protein DAPPUDRAFT_331172 [Daphnia pulex]
Length = 253
Score = 97.4 bits (241), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 45/47 (95%), Positives = 45/47 (95%)
Query: 44 KNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTE 90
K SKRQRRQRTHFTSQQLQELEATF RNRYPDMSTREEIAMWTNLTE
Sbjct: 31 KTSKRQRRQRTHFTSQQLQELEATFTRNRYPDMSTREEIAMWTNLTE 77
>gi|395828473|ref|XP_003787402.1| PREDICTED: LOW QUALITY PROTEIN: pituitary homeobox 3 [Otolemur
garnettii]
Length = 450
Score = 97.4 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 48/68 (70%), Positives = 55/68 (80%), Gaps = 1/68 (1%)
Query: 24 HNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIA 83
H+DS E +SA + ++ K+QRRQRTHFTSQQLQELEATF RNRYPDMSTREEIA
Sbjct: 186 HSDS-EKASASLPGGSPEDGSLKKKQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIA 244
Query: 84 MWTNLTEA 91
+WTNLTEA
Sbjct: 245 VWTNLTEA 252
>gi|194041917|ref|XP_001925697.1| PREDICTED: pituitary homeobox 3-like [Sus scrofa]
Length = 531
Score = 97.1 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 48/68 (70%), Positives = 55/68 (80%), Gaps = 1/68 (1%)
Query: 24 HNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIA 83
H+DS E +SA + ++ K+QRRQRTHFTSQQLQELEATF RNRYPDMSTREEIA
Sbjct: 270 HSDS-EKASASLPGGSPEDGSLKKKQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIA 328
Query: 84 MWTNLTEA 91
+WTNLTEA
Sbjct: 329 VWTNLTEA 336
>gi|449500088|ref|XP_004174919.1| PREDICTED: LOW QUALITY PROTEIN: pituitary homeobox 2 [Taeniopygia
guttata]
Length = 334
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/72 (69%), Positives = 54/72 (75%), Gaps = 7/72 (9%)
Query: 27 SIEDSSAKDSSSNSKN-------TKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTR 79
S +++ KD S SKN KRQRRQRTHFTSQQLQELEATF RNRYPDMSTR
Sbjct: 73 SSPEAAEKDKSQQSKNEDAGPEDPSKKKRQRRQRTHFTSQQLQELEATFQRNRYPDMSTR 132
Query: 80 EEIAMWTNLTEA 91
EEIA+WTNLTEA
Sbjct: 133 EEIAVWTNLTEA 144
>gi|327274064|ref|XP_003221798.1| PREDICTED: pituitary homeobox 2-like isoform 1 [Anolis
carolinensis]
Length = 339
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/72 (69%), Positives = 54/72 (75%), Gaps = 7/72 (9%)
Query: 27 SIEDSSAKDSSSNSKN-------TKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTR 79
S +++ KD S SKN KRQRRQRTHFTSQQLQELEATF RNRYPDMSTR
Sbjct: 78 SSPEAAEKDKSQPSKNEEPGAEDPSKKKRQRRQRTHFTSQQLQELEATFQRNRYPDMSTR 137
Query: 80 EEIAMWTNLTEA 91
EEIA+WTNLTEA
Sbjct: 138 EEIAVWTNLTEA 149
>gi|440912409|gb|ELR61979.1| Pituitary homeobox 3 [Bos grunniens mutus]
Length = 267
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/68 (69%), Positives = 54/68 (79%), Gaps = 1/68 (1%)
Query: 24 HNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIA 83
H+DS E +S + ++ K+QRRQRTHFTSQQLQELEATF RNRYPDMSTREEIA
Sbjct: 38 HSDS-EKASVSLPGGSPEDGSLKKKQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIA 96
Query: 84 MWTNLTEA 91
+WTNLTEA
Sbjct: 97 VWTNLTEA 104
>gi|334331215|ref|XP_003341468.1| PREDICTED: LOW QUALITY PROTEIN: pituitary homeobox 2-like
[Monodelphis domestica]
Length = 283
Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/70 (68%), Positives = 55/70 (78%), Gaps = 2/70 (2%)
Query: 22 SNHNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREE 81
+N D + S +D+ + + K KRQRRQRTHFTSQQLQELEATF RNRYPDMSTREE
Sbjct: 60 ANEKDKSQQSKNEDTGAEDPSKK--KRQRRQRTHFTSQQLQELEATFQRNRYPDMSTREE 117
Query: 82 IAMWTNLTEA 91
IA+WTNLTEA
Sbjct: 118 IAVWTNLTEA 127
>gi|47227473|emb|CAG04621.1| unnamed protein product [Tetraodon nigroviridis]
Length = 253
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/74 (66%), Positives = 53/74 (71%), Gaps = 11/74 (14%)
Query: 18 KTELSNHNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMS 77
K ++ N ND D +K KRQRRQRTHFTSQQLQELEATF RNRYPDMS
Sbjct: 2 KEKIQNKNDDSSDDPSKK-----------KRQRRQRTHFTSQQLQELEATFQRNRYPDMS 50
Query: 78 TREEIAMWTNLTEA 91
TREEIA+WTNLTEA
Sbjct: 51 TREEIAVWTNLTEA 64
>gi|148710035|gb|EDL41981.1| paired-like homeodomain transcription factor 3 [Mus musculus]
Length = 348
Score = 96.3 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 48/68 (70%), Positives = 55/68 (80%), Gaps = 1/68 (1%)
Query: 24 HNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIA 83
H+DS E +SA + ++ K+QRRQRTHFTSQQLQELEATF RNRYPDMSTREEIA
Sbjct: 84 HSDS-EKASASLPGGSPEDGSLKKKQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIA 142
Query: 84 MWTNLTEA 91
+WTNLTEA
Sbjct: 143 VWTNLTEA 150
>gi|432114807|gb|ELK36551.1| Pituitary homeobox 2 [Myotis davidii]
Length = 292
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/63 (76%), Positives = 50/63 (79%), Gaps = 7/63 (11%)
Query: 29 EDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNL 88
ED A+D S KRQRRQRTHFTSQQLQELEATF RNRYPDMSTREEIA+WTNL
Sbjct: 59 EDVGAEDPSKK-------KRQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTNL 111
Query: 89 TEA 91
TEA
Sbjct: 112 TEA 114
>gi|185132230|ref|NP_001117154.1| paired-like homeodomain transcription factor 2beta [Salmo salar]
gi|158380241|gb|ABW37417.1| paired-like homeodomain transcription factor 2beta [Salmo salar]
Length = 319
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/71 (71%), Positives = 54/71 (76%), Gaps = 6/71 (8%)
Query: 27 SIEDSSAKDSSSNSKNTKNS------KRQRRQRTHFTSQQLQELEATFARNRYPDMSTRE 80
S +S KDS SK +S KRQRRQRTHFTSQQLQELEATF RNRYPDMSTRE
Sbjct: 59 SSPESVEKDSKGQSKTDDSSDDPSKKKRQRRQRTHFTSQQLQELEATFQRNRYPDMSTRE 118
Query: 81 EIAMWTNLTEA 91
EIA+WTNLTEA
Sbjct: 119 EIAVWTNLTEA 129
>gi|395542232|ref|XP_003773037.1| PREDICTED: pituitary homeobox 2 isoform 1 [Sarcophilus harrisii]
Length = 317
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/69 (66%), Positives = 54/69 (78%)
Query: 23 NHNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEI 82
N N+ + K+ + +++ KRQRRQRTHFTSQQLQELEATF RNRYPDMSTREEI
Sbjct: 59 NANEKDKSQQNKNEDAGTEDPSKKKRQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEI 118
Query: 83 AMWTNLTEA 91
A+WTNLTEA
Sbjct: 119 AVWTNLTEA 127
>gi|410976019|ref|XP_003994423.1| PREDICTED: pituitary homeobox 3 [Felis catus]
Length = 155
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/68 (70%), Positives = 55/68 (80%), Gaps = 1/68 (1%)
Query: 24 HNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIA 83
H+DS E +SA + ++ K+QRRQRTHFTSQQLQELEATF RNRYPDMSTREEIA
Sbjct: 38 HSDS-EKASASLPGGSPEDGSLKKKQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIA 96
Query: 84 MWTNLTEA 91
+WTNLTEA
Sbjct: 97 VWTNLTEA 104
>gi|410914305|ref|XP_003970628.1| PREDICTED: pituitary homeobox 2-like isoform 2 [Takifugu
rubripes]
Length = 268
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/74 (66%), Positives = 53/74 (71%), Gaps = 11/74 (14%)
Query: 18 KTELSNHNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMS 77
K ++ N ND D +K KRQRRQRTHFTSQQLQELEATF RNRYPDMS
Sbjct: 17 KEKIQNKNDDSSDDPSKK-----------KRQRRQRTHFTSQQLQELEATFQRNRYPDMS 65
Query: 78 TREEIAMWTNLTEA 91
TREEIA+WTNLTEA
Sbjct: 66 TREEIAVWTNLTEA 79
>gi|344277314|ref|XP_003410447.1| PREDICTED: LOW QUALITY PROTEIN: pituitary homeobox 2-like
[Loxodonta africana]
Length = 326
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/72 (68%), Positives = 53/72 (73%), Gaps = 7/72 (9%)
Query: 27 SIEDSSAKDSSSNSKN-------TKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTR 79
S +++ KD S KN KRQRRQRTHFTSQQLQELEATF RNRYPDMSTR
Sbjct: 65 SSPEAAEKDKSQQGKNEDVGAEDPSKKKRQRRQRTHFTSQQLQELEATFQRNRYPDMSTR 124
Query: 80 EEIAMWTNLTEA 91
EEIA+WTNLTEA
Sbjct: 125 EEIAVWTNLTEA 136
>gi|22531353|emb|CAD30206.1| paired superclass homeobox transcription factor [Petromyzon
marinus]
Length = 263
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/75 (64%), Positives = 58/75 (77%), Gaps = 2/75 (2%)
Query: 19 TELSNHNDSIEDSS--AKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDM 76
T+LS+ ++S + + K + ++ KRQRRQRTHFTSQQLQELEATF RNRYPDM
Sbjct: 7 TQLSSCSESETEKAQAGKADEAGGEDPSKKKRQRRQRTHFTSQQLQELEATFQRNRYPDM 66
Query: 77 STREEIAMWTNLTEA 91
STREEIA+WTNLTEA
Sbjct: 67 STREEIAVWTNLTEA 81
>gi|354504449|ref|XP_003514288.1| PREDICTED: pituitary homeobox 2-like isoform 1 [Cricetulus griseus]
gi|344255585|gb|EGW11689.1| Pituitary homeobox 2 [Cricetulus griseus]
Length = 322
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/63 (76%), Positives = 50/63 (79%), Gaps = 7/63 (11%)
Query: 29 EDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNL 88
ED A+D S KRQRRQRTHFTSQQLQELEATF RNRYPDMSTREEIA+WTNL
Sbjct: 79 EDVGAEDPSKK-------KRQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTNL 131
Query: 89 TEA 91
TEA
Sbjct: 132 TEA 134
>gi|62204427|gb|AAH92922.1| Paired-like homeodomain transcription factor 2 [Danio rerio]
Length = 314
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/63 (76%), Positives = 52/63 (82%), Gaps = 1/63 (1%)
Query: 29 EDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNL 88
E +K+ SN +K KRQRRQRTHFTSQQLQELEATF RNRYPDMSTREEIA+WTNL
Sbjct: 63 EKGQSKNEDSNDDPSKK-KRQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTNL 121
Query: 89 TEA 91
TEA
Sbjct: 122 TEA 124
>gi|395502236|ref|XP_003755488.1| PREDICTED: pituitary homeobox 3 [Sarcophilus harrisii]
Length = 214
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/68 (66%), Positives = 53/68 (77%)
Query: 24 HNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIA 83
H+D+ + S +++ K+QRRQRTHFTSQQLQELEATF RNRYPDMSTREEIA
Sbjct: 38 HSDTEKAPPQLPGGSPTEDGSLKKKQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIA 97
Query: 84 MWTNLTEA 91
+WTNLTEA
Sbjct: 98 VWTNLTEA 105
>gi|18859235|ref|NP_571050.1| pituitary homeobox 2 [Danio rerio]
gi|18203562|sp|Q9W5Z2.1|PITX2_DANRE RecName: Full=Pituitary homeobox 2; AltName: Full=Homeobox protein
PITX2; AltName: Full=Paired-like homeodomain
transcription factor 2
gi|4959544|gb|AAD34390.1|AF132446_1 transcription factor Pitx2 isoform c [Danio rerio]
gi|5107929|gb|AAD40179.1|AF156905_1 transcription factor Pitx2c [Danio rerio]
Length = 314
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/63 (76%), Positives = 52/63 (82%), Gaps = 1/63 (1%)
Query: 29 EDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNL 88
E +K+ SN +K KRQRRQRTHFTSQQLQELEATF RNRYPDMSTREEIA+WTNL
Sbjct: 63 EKGQSKNEDSNDDPSKK-KRQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTNL 121
Query: 89 TEA 91
TEA
Sbjct: 122 TEA 124
>gi|171544943|ref|NP_001116388.1| paired-like homeodomain transcription factor 2a [Oryzias latipes]
gi|157410517|gb|ABV53981.1| paired-like homeodomain transcription factor 2a [Oryzias latipes]
Length = 316
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/74 (66%), Positives = 53/74 (71%), Gaps = 11/74 (14%)
Query: 18 KTELSNHNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMS 77
K ++ N ND D +K KRQRRQRTHFTSQQLQELEATF RNRYPDMS
Sbjct: 66 KEKIQNKNDDSSDDPSKK-----------KRQRRQRTHFTSQQLQELEATFQRNRYPDMS 114
Query: 78 TREEIAMWTNLTEA 91
TREEIA+WTNLTEA
Sbjct: 115 TREEIAVWTNLTEA 128
>gi|313236597|emb|CBY19890.1| unnamed protein product [Oikopleura dioica]
Length = 340
Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/93 (52%), Positives = 57/93 (61%), Gaps = 14/93 (15%)
Query: 13 LIGNIKTEL--------------SNHNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTS 58
L+ ++KTE+ SN + S + K+QRRQRTHFTS
Sbjct: 23 LVSDVKTEIHGVELGVEPYPEVNSNPSGSPPGVEEDKDEDKVDDDGKPKKQRRQRTHFTS 82
Query: 59 QQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
QQLQELE+ FARNRYPDMSTREEIAMWTNLTEA
Sbjct: 83 QQLQELESLFARNRYPDMSTREEIAMWTNLTEA 115
>gi|26330418|dbj|BAC28939.1| unnamed protein product [Mus musculus]
Length = 164
Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/63 (76%), Positives = 50/63 (79%), Gaps = 7/63 (11%)
Query: 29 EDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNL 88
ED A+D S KRQRRQRTHFTSQQLQELEATF RNRYPDMSTREEIA+WTNL
Sbjct: 79 EDVGAEDPSKK-------KRQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTNL 131
Query: 89 TEA 91
TEA
Sbjct: 132 TEA 134
>gi|291401270|ref|XP_002717162.1| PREDICTED: paired-like homeodomain 1 isoform 2 [Oryctolagus
cuniculus]
Length = 325
Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/72 (68%), Positives = 53/72 (73%), Gaps = 7/72 (9%)
Query: 27 SIEDSSAKDSSSNSKN-------TKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTR 79
S +++ KD S KN KRQRRQRTHFTSQQLQELEATF RNRYPDMSTR
Sbjct: 64 SSPEAAEKDKSQQGKNEDVGAEDPSKKKRQRRQRTHFTSQQLQELEATFQRNRYPDMSTR 123
Query: 80 EEIAMWTNLTEA 91
EEIA+WTNLTEA
Sbjct: 124 EEIAVWTNLTEA 135
>gi|403275550|ref|XP_003929503.1| PREDICTED: pituitary homeobox 2 isoform 3 [Saimiri boliviensis
boliviensis]
Length = 325
Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/63 (76%), Positives = 50/63 (79%), Gaps = 7/63 (11%)
Query: 29 EDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNL 88
ED A+D S KRQRRQRTHFTSQQLQELEATF RNRYPDMSTREEIA+WTNL
Sbjct: 80 EDVGAEDPSKK-------KRQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTNL 132
Query: 89 TEA 91
TEA
Sbjct: 133 TEA 135
>gi|297674178|ref|XP_002815113.1| PREDICTED: pituitary homeobox 2 isoform 3 [Pongo abelii]
Length = 325
Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/63 (76%), Positives = 50/63 (79%), Gaps = 7/63 (11%)
Query: 29 EDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNL 88
ED A+D S KRQRRQRTHFTSQQLQELEATF RNRYPDMSTREEIA+WTNL
Sbjct: 80 EDVGAEDPSKK-------KRQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTNL 132
Query: 89 TEA 91
TEA
Sbjct: 133 TEA 135
>gi|4959546|gb|AAD34391.1|AF132447_1 transcription factor Pitx2 isoform a [Danio rerio]
gi|5107931|gb|AAD40180.1|AF156906_1 transcription factor Pitx2a [Danio rerio]
gi|6016473|gb|AAF00486.2|AF181681_1 transcription factor Pitx2 [Danio rerio]
Length = 269
Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/63 (76%), Positives = 52/63 (82%), Gaps = 1/63 (1%)
Query: 29 EDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNL 88
E +K+ SN +K KRQRRQRTHFTSQQLQELEATF RNRYPDMSTREEIA+WTNL
Sbjct: 18 EKGQSKNEDSNDDPSKK-KRQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTNL 76
Query: 89 TEA 91
TEA
Sbjct: 77 TEA 79
>gi|395851306|ref|XP_003798203.1| PREDICTED: pituitary homeobox 2 isoform 1 [Otolemur garnettii]
Length = 325
Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/63 (76%), Positives = 50/63 (79%), Gaps = 7/63 (11%)
Query: 29 EDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNL 88
ED A+D S KRQRRQRTHFTSQQLQELEATF RNRYPDMSTREEIA+WTNL
Sbjct: 80 EDVGAEDPSKK-------KRQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTNL 132
Query: 89 TEA 91
TEA
Sbjct: 133 TEA 135
>gi|332240441|ref|XP_003269394.1| PREDICTED: pituitary homeobox 2 isoform 1 [Nomascus leucogenys]
Length = 325
Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/63 (76%), Positives = 50/63 (79%), Gaps = 7/63 (11%)
Query: 29 EDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNL 88
ED A+D S KRQRRQRTHFTSQQLQELEATF RNRYPDMSTREEIA+WTNL
Sbjct: 80 EDVGAEDPSKK-------KRQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTNL 132
Query: 89 TEA 91
TEA
Sbjct: 133 TEA 135
>gi|15823607|dbj|BAB69053.1| pitx2 [Paralichthys olivaceus]
Length = 312
Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/92 (56%), Positives = 65/92 (70%), Gaps = 10/92 (10%)
Query: 10 IEPLIGNIKTELSNHNDSIEDSSAKDSSSNSKN-TKNS---------KRQRRQRTHFTSQ 59
++PL ++ ++ + ++ D+S+ +S KN KN KRQRRQRTHFTSQ
Sbjct: 33 LQPLQRSVDSKHRHEVHTVSDTSSPESVEKEKNQNKNDDSSDDPSKKKRQRRQRTHFTSQ 92
Query: 60 QLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
QLQELEATF RNRYPDMSTREEIA+WTNLTEA
Sbjct: 93 QLQELEATFQRNRYPDMSTREEIAVWTNLTEA 124
>gi|13183093|gb|AAK15048.1| paired-like homeodomain transcription factor 2 [Homo sapiens]
Length = 271
Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/63 (76%), Positives = 50/63 (79%), Gaps = 7/63 (11%)
Query: 29 EDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNL 88
ED A+D S KRQRRQRTHFTSQQLQELEATF RNRYPDMSTREEIA+WTNL
Sbjct: 26 EDVGAEDPSKK-------KRQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTNL 78
Query: 89 TEA 91
TEA
Sbjct: 79 TEA 81
>gi|354504455|ref|XP_003514291.1| PREDICTED: pituitary homeobox 2-like isoform 4 [Cricetulus
griseus]
Length = 269
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/63 (76%), Positives = 50/63 (79%), Gaps = 7/63 (11%)
Query: 29 EDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNL 88
ED A+D S KRQRRQRTHFTSQQLQELEATF RNRYPDMSTREEIA+WTNL
Sbjct: 26 EDVGAEDPSKK-------KRQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTNL 78
Query: 89 TEA 91
TEA
Sbjct: 79 TEA 81
>gi|21361183|ref|NP_000316.2| pituitary homeobox 2 isoform c [Homo sapiens]
gi|114595678|ref|XP_001141234.1| PREDICTED: pituitary homeobox 2 isoform 3 [Pan troglodytes]
gi|397519869|ref|XP_003830075.1| PREDICTED: pituitary homeobox 2 isoform 1 [Pan paniscus]
gi|426345241|ref|XP_004040329.1| PREDICTED: pituitary homeobox 2 [Gorilla gorilla gorilla]
gi|3078011|gb|AAC39718.1| ALL1 responsive protein ARP1c [Homo sapiens]
gi|17315124|gb|AAH13998.1| Paired-like homeodomain 2 [Homo sapiens]
gi|119626668|gb|EAX06263.1| paired-like homeodomain transcription factor 2, isoform CRA_b [Homo
sapiens]
gi|123993501|gb|ABM84352.1| paired-like homeodomain transcription factor 2 [synthetic
construct]
gi|124000463|gb|ABM87740.1| paired-like homeodomain transcription factor 2 [synthetic
construct]
gi|189054179|dbj|BAG36699.1| unnamed protein product [Homo sapiens]
gi|261860068|dbj|BAI46556.1| paired-like homeodomain 2 [synthetic construct]
gi|410342053|gb|JAA39973.1| paired-like homeodomain 2 [Pan troglodytes]
Length = 324
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/63 (76%), Positives = 50/63 (79%), Gaps = 7/63 (11%)
Query: 29 EDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNL 88
ED A+D S KRQRRQRTHFTSQQLQELEATF RNRYPDMSTREEIA+WTNL
Sbjct: 79 EDVGAEDPSKK-------KRQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTNL 131
Query: 89 TEA 91
TEA
Sbjct: 132 TEA 134
>gi|410957003|ref|XP_003985124.1| PREDICTED: pituitary homeobox 2 isoform 1 [Felis catus]
Length = 325
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/72 (68%), Positives = 53/72 (73%), Gaps = 7/72 (9%)
Query: 27 SIEDSSAKDSSSNSKN-------TKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTR 79
S +++ KD S KN KRQRRQRTHFTSQQLQELEATF RNRYPDMSTR
Sbjct: 64 SSPEAAEKDKSQQGKNEDVGPEDPSKKKRQRRQRTHFTSQQLQELEATFQRNRYPDMSTR 123
Query: 80 EEIAMWTNLTEA 91
EEIA+WTNLTEA
Sbjct: 124 EEIAVWTNLTEA 135
>gi|147901103|ref|NP_001091460.1| pituitary homeobox 2 [Bos taurus]
gi|426231269|ref|XP_004009662.1| PREDICTED: pituitary homeobox 2 isoform 1 [Ovis aries]
gi|146186826|gb|AAI40580.1| PITX2 protein [Bos taurus]
gi|296486755|tpg|DAA28868.1| TPA: paired-like homeodomain 2 [Bos taurus]
gi|440905673|gb|ELR56024.1| Pituitary homeobox 2 [Bos grunniens mutus]
Length = 325
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/63 (76%), Positives = 50/63 (79%), Gaps = 7/63 (11%)
Query: 29 EDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNL 88
ED A+D S KRQRRQRTHFTSQQLQELEATF RNRYPDMSTREEIA+WTNL
Sbjct: 80 EDVGAEDPSKK-------KRQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTNL 132
Query: 89 TEA 91
TEA
Sbjct: 133 TEA 135
>gi|269854613|gb|ACZ51351.1| transcription factor Pitx3 [Haplochromis burtoni]
Length = 295
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 51/73 (69%), Positives = 57/73 (78%), Gaps = 8/73 (10%)
Query: 19 TELSNHNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMST 78
TE S N +++SSA+D S K+QRRQRTHFTSQQLQELEATF RNRYPDMST
Sbjct: 38 TEKSQQNQ-LDESSAEDGSLK-------KKQRRQRTHFTSQQLQELEATFQRNRYPDMST 89
Query: 79 REEIAMWTNLTEA 91
REEIA+WTNLTEA
Sbjct: 90 REEIAVWTNLTEA 102
>gi|1930008|gb|AAC53120.1| pituitary homeobox 2 isoform a [Mus musculus]
Length = 271
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/63 (76%), Positives = 50/63 (79%), Gaps = 7/63 (11%)
Query: 29 EDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNL 88
ED A+D S KRQRRQRTHFTSQQLQELEATF RNRYPDMSTREEIA+WTNL
Sbjct: 26 EDVGAEDPSKK-------KRQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTNL 78
Query: 89 TEA 91
TEA
Sbjct: 79 TEA 81
>gi|194208516|ref|XP_001916416.1| PREDICTED: pituitary homeobox 2 isoform 1 [Equus caballus]
gi|338722607|ref|XP_003364575.1| PREDICTED: pituitary homeobox 2 [Equus caballus]
gi|395851308|ref|XP_003798204.1| PREDICTED: pituitary homeobox 2 isoform 2 [Otolemur garnettii]
Length = 271
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/63 (76%), Positives = 50/63 (79%), Gaps = 7/63 (11%)
Query: 29 EDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNL 88
ED A+D S KRQRRQRTHFTSQQLQELEATF RNRYPDMSTREEIA+WTNL
Sbjct: 26 EDVGAEDPSKK-------KRQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTNL 78
Query: 89 TEA 91
TEA
Sbjct: 79 TEA 81
>gi|172046400|emb|CAP79627.1| paired-like homeodomain transcription factor 2, isoform 2b2 [Mus
musculus]
Length = 304
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/63 (76%), Positives = 50/63 (79%), Gaps = 7/63 (11%)
Query: 29 EDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNL 88
ED A+D S KRQRRQRTHFTSQQLQELEATF RNRYPDMSTREEIA+WTNL
Sbjct: 59 EDVGAEDPSKK-------KRQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTNL 111
Query: 89 TEA 91
TEA
Sbjct: 112 TEA 114
>gi|9506975|ref|NP_062207.1| pituitary homeobox 2 isoform 2 [Rattus norvegicus]
gi|109948277|ref|NP_001035969.1| pituitary homeobox 2 isoform a [Mus musculus]
gi|109075378|ref|XP_001091165.1| PREDICTED: pituitary homeobox 2-like isoform 3 [Macaca mulatta]
gi|402870244|ref|XP_003899145.1| PREDICTED: pituitary homeobox 2 isoform 2 [Papio anubis]
gi|1724116|gb|AAB38505.1| orthodenticle-like homeobox 2 [Mus musculus]
gi|3078013|gb|AAC40086.1| ALL1 responsive protein ARP1a [Mus musculus]
gi|3834392|gb|AAC70909.1| homeobox protein [Rattus norvegicus]
gi|5706496|emb|CAB52284.1| homeodomain protein Ptx2B [Rattus norvegicus]
gi|148680298|gb|EDL12245.1| paired-like homeodomain transcription factor 2, isoform CRA_b
[Mus musculus]
gi|149025926|gb|EDL82169.1| paired-like homeodomain transcription factor 2, isoform CRA_b
[Rattus norvegicus]
Length = 271
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/63 (76%), Positives = 50/63 (79%), Gaps = 7/63 (11%)
Query: 29 EDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNL 88
ED A+D S KRQRRQRTHFTSQQLQELEATF RNRYPDMSTREEIA+WTNL
Sbjct: 26 EDVGAEDPSKK-------KRQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTNL 78
Query: 89 TEA 91
TEA
Sbjct: 79 TEA 81
>gi|1737173|gb|AAB38864.1| solurshin, partial [Mus musculus]
Length = 255
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/63 (76%), Positives = 50/63 (79%), Gaps = 7/63 (11%)
Query: 29 EDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNL 88
ED A+D S KRQRRQRTHFTSQQLQELEATF RNRYPDMSTREEIA+WTNL
Sbjct: 10 EDVGAEDPSKK-------KRQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTNL 62
Query: 89 TEA 91
TEA
Sbjct: 63 TEA 65
>gi|74002156|ref|XP_851370.1| PREDICTED: pituitary homeobox 2 isoform 2 [Canis lupus familiaris]
Length = 325
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/72 (68%), Positives = 53/72 (73%), Gaps = 7/72 (9%)
Query: 27 SIEDSSAKDSSSNSKN-------TKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTR 79
S +++ KD S KN KRQRRQRTHFTSQQLQELEATF RNRYPDMSTR
Sbjct: 64 SSPEAAEKDKSQQGKNEDVGTEDPSKKKRQRRQRTHFTSQQLQELEATFQRNRYPDMSTR 123
Query: 80 EEIAMWTNLTEA 91
EEIA+WTNLTEA
Sbjct: 124 EEIAVWTNLTEA 135
>gi|354504453|ref|XP_003514290.1| PREDICTED: pituitary homeobox 2-like isoform 3 [Cricetulus griseus]
Length = 302
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/63 (76%), Positives = 50/63 (79%), Gaps = 7/63 (11%)
Query: 29 EDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNL 88
ED A+D S KRQRRQRTHFTSQQLQELEATF RNRYPDMSTREEIA+WTNL
Sbjct: 59 EDVGAEDPSKK-------KRQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTNL 111
Query: 89 TEA 91
TEA
Sbjct: 112 TEA 114
>gi|172046402|emb|CAP91067.1| Pitx2cbeta [Mus musculus]
Length = 290
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/63 (76%), Positives = 50/63 (79%), Gaps = 7/63 (11%)
Query: 29 EDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNL 88
ED A+D S KRQRRQRTHFTSQQLQELEATF RNRYPDMSTREEIA+WTNL
Sbjct: 45 EDVGAEDPSKK-------KRQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTNL 97
Query: 89 TEA 91
TEA
Sbjct: 98 TEA 100
>gi|410914303|ref|XP_003970627.1| PREDICTED: pituitary homeobox 2-like isoform 1 [Takifugu rubripes]
Length = 314
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/74 (66%), Positives = 53/74 (71%), Gaps = 11/74 (14%)
Query: 18 KTELSNHNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMS 77
K ++ N ND D +K KRQRRQRTHFTSQQLQELEATF RNRYPDMS
Sbjct: 63 KEKIQNKNDDSSDDPSKK-----------KRQRRQRTHFTSQQLQELEATFQRNRYPDMS 111
Query: 78 TREEIAMWTNLTEA 91
TREEIA+WTNLTEA
Sbjct: 112 TREEIAVWTNLTEA 125
>gi|24234711|ref|NP_700476.1| pituitary homeobox 2 isoform a [Homo sapiens]
gi|324710996|ref|NP_001191328.1| pituitary homeobox 2 isoform a [Homo sapiens]
gi|296195753|ref|XP_002745525.1| PREDICTED: pituitary homeobox 2 isoform 3 [Callithrix jacchus]
gi|397519873|ref|XP_003830077.1| PREDICTED: pituitary homeobox 2 isoform 3 [Pan paniscus]
gi|403275546|ref|XP_003929501.1| PREDICTED: pituitary homeobox 2 isoform 1 [Saimiri boliviensis
boliviensis]
gi|426231273|ref|XP_004009664.1| PREDICTED: pituitary homeobox 2 isoform 3 [Ovis aries]
gi|3078007|gb|AAC39716.1| ALL1 responsive protein ARP1a [Homo sapiens]
gi|76780065|gb|AAI06011.1| Paired-like homeodomain 2 [Homo sapiens]
gi|119626669|gb|EAX06264.1| paired-like homeodomain transcription factor 2, isoform CRA_c
[Homo sapiens]
gi|410342055|gb|JAA39974.1| paired-like homeodomain 2 [Pan troglodytes]
Length = 271
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/63 (76%), Positives = 50/63 (79%), Gaps = 7/63 (11%)
Query: 29 EDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNL 88
ED A+D S KRQRRQRTHFTSQQLQELEATF RNRYPDMSTREEIA+WTNL
Sbjct: 26 EDVGAEDPSKK-------KRQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTNL 78
Query: 89 TEA 91
TEA
Sbjct: 79 TEA 81
>gi|426231275|ref|XP_004009665.1| PREDICTED: pituitary homeobox 2 isoform 4 [Ovis aries]
Length = 304
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/63 (76%), Positives = 50/63 (79%), Gaps = 7/63 (11%)
Query: 29 EDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNL 88
ED A+D S KRQRRQRTHFTSQQLQELEATF RNRYPDMSTREEIA+WTNL
Sbjct: 59 EDVGAEDPSKK-------KRQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTNL 111
Query: 89 TEA 91
TEA
Sbjct: 112 TEA 114
>gi|431897152|gb|ELK06414.1| Pituitary homeobox 2 [Pteropus alecto]
Length = 325
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/72 (68%), Positives = 53/72 (73%), Gaps = 7/72 (9%)
Query: 27 SIEDSSAKDSSSNSKN-------TKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTR 79
S +++ KD S KN KRQRRQRTHFTSQQLQELEATF RNRYPDMSTR
Sbjct: 64 SSPEAAEKDKSQQGKNEDVGADDPSKKKRQRRQRTHFTSQQLQELEATFQRNRYPDMSTR 123
Query: 80 EEIAMWTNLTEA 91
EEIA+WTNLTEA
Sbjct: 124 EEIAVWTNLTEA 135
>gi|397519875|ref|XP_003830078.1| PREDICTED: pituitary homeobox 2 isoform 4 [Pan paniscus]
Length = 304
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/63 (76%), Positives = 50/63 (79%), Gaps = 7/63 (11%)
Query: 29 EDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNL 88
ED A+D S KRQRRQRTHFTSQQLQELEATF RNRYPDMSTREEIA+WTNL
Sbjct: 59 EDVGAEDPSKK-------KRQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTNL 111
Query: 89 TEA 91
TEA
Sbjct: 112 TEA 114
>gi|301764282|ref|XP_002917559.1| PREDICTED: pituitary homeobox 2-like isoform 2 [Ailuropoda
melanoleuca]
gi|281346789|gb|EFB22373.1| hypothetical protein PANDA_005886 [Ailuropoda melanoleuca]
Length = 325
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/72 (68%), Positives = 53/72 (73%), Gaps = 7/72 (9%)
Query: 27 SIEDSSAKDSSSNSKN-------TKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTR 79
S +++ KD S KN KRQRRQRTHFTSQQLQELEATF RNRYPDMSTR
Sbjct: 64 SSPEAAEKDKSQQGKNEDVGTEDPSKKKRQRRQRTHFTSQQLQELEATFQRNRYPDMSTR 123
Query: 80 EEIAMWTNLTEA 91
EEIA+WTNLTEA
Sbjct: 124 EEIAVWTNLTEA 135
>gi|224052452|ref|XP_002197829.1| PREDICTED: pituitary homeobox 3 [Taeniopygia guttata]
Length = 292
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 46/69 (66%), Positives = 55/69 (79%)
Query: 23 NHNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEI 82
+H+D+ + + SN ++ K+QRRQRTHFTSQQLQELEATF RNRYPDMSTREEI
Sbjct: 34 DHSDTEKSQQNQTDDSNPEDGSLKKKQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEI 93
Query: 83 AMWTNLTEA 91
A+WTNLTEA
Sbjct: 94 AVWTNLTEA 102
>gi|330340407|ref|NP_001193364.1| pituitary homeobox 2 [Sus scrofa]
gi|292806711|gb|ADE42485.1| paired-like homeodomain transcription factor 2c [Sus scrofa]
Length = 326
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/63 (76%), Positives = 50/63 (79%), Gaps = 7/63 (11%)
Query: 29 EDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNL 88
ED A+D S KRQRRQRTHFTSQQLQELEATF RNRYPDMSTREEIA+WTNL
Sbjct: 81 EDVGAEDPSKK-------KRQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTNL 133
Query: 89 TEA 91
TEA
Sbjct: 134 TEA 136
>gi|118092700|ref|XP_421631.2| PREDICTED: pituitary homeobox 3-like [Gallus gallus]
Length = 292
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 46/69 (66%), Positives = 55/69 (79%)
Query: 23 NHNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEI 82
+H+D+ + + SN ++ K+QRRQRTHFTSQQLQELEATF RNRYPDMSTREEI
Sbjct: 34 DHSDTEKSQQNQTDDSNPEDGSLKKKQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEI 93
Query: 83 AMWTNLTEA 91
A+WTNLTEA
Sbjct: 94 AVWTNLTEA 102
>gi|326923546|ref|XP_003207996.1| PREDICTED: pituitary homeobox 3-like [Meleagris gallopavo]
gi|449269113|gb|EMC79919.1| Pituitary homeobox 3 [Columba livia]
Length = 292
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 46/69 (66%), Positives = 55/69 (79%)
Query: 23 NHNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEI 82
+H+D+ + + SN ++ K+QRRQRTHFTSQQLQELEATF RNRYPDMSTREEI
Sbjct: 34 DHSDTEKSQQNQTDDSNPEDGSLKKKQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEI 93
Query: 83 AMWTNLTEA 91
A+WTNLTEA
Sbjct: 94 AVWTNLTEA 102
>gi|239937988|gb|ACS36093.1| pitx homeobox A2 [Eptatretus stoutii]
Length = 263
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/59 (79%), Positives = 52/59 (88%), Gaps = 2/59 (3%)
Query: 33 AKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
A+++S + N K KRQRRQRTHFTSQQLQELEATF RNRYPDMSTREEIA+WTNLTEA
Sbjct: 25 AEETSVDDSNKK--KRQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTNLTEA 81
>gi|327276787|ref|XP_003223149.1| PREDICTED: pituitary homeobox 3-like [Anolis carolinensis]
Length = 286
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 46/68 (67%), Positives = 54/68 (79%)
Query: 24 HNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIA 83
H+D+ + + SN ++ K+QRRQRTHFTSQQLQELEATF RNRYPDMSTREEIA
Sbjct: 35 HSDTEKSQQNQTDDSNPEDGSLKKKQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIA 94
Query: 84 MWTNLTEA 91
+WTNLTEA
Sbjct: 95 VWTNLTEA 102
>gi|71068426|gb|AAZ23135.1| pituitary homeobox transcript variant 4 [Oikopleura dioica]
gi|71068434|gb|AAZ23139.1| pituitary homeobox transcript variant 4 [Oikopleura dioica]
Length = 258
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 49/93 (52%), Positives = 59/93 (63%), Gaps = 14/93 (15%)
Query: 13 LIGNIKTEL--------------SNHNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTS 58
L+ ++KTE+ SN + S + + + K+QRRQRTHFTS
Sbjct: 23 LVSDVKTEIHGVELGVEPYPEVNSNPSGSPPGAEDEKDEDKVDDDGKPKKQRRQRTHFTS 82
Query: 59 QQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
QQLQELE+ FARNRYPDMSTREEIAMWTNLTEA
Sbjct: 83 QQLQELESLFARNRYPDMSTREEIAMWTNLTEA 115
>gi|62869861|gb|AAY18081.1| Pitx2 [Hippoglossus hippoglossus]
Length = 283
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 48/63 (76%), Positives = 53/63 (84%), Gaps = 2/63 (3%)
Query: 29 EDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNL 88
++ S D SS+ + K KRQRRQRTHFTSQQLQELEATF RNRYPDMSTREEIA+WTNL
Sbjct: 46 KNQSKNDDSSDDPSKK--KRQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTNL 103
Query: 89 TEA 91
TEA
Sbjct: 104 TEA 106
>gi|45384358|ref|NP_990341.1| pituitary homeobox 2 [Gallus gallus]
gi|6093722|sp|O93385.1|PITX2_CHICK RecName: Full=Pituitary homeobox 2; AltName: Full=Homeobox protein
PITX2; Short=cPITX2; AltName: Full=Paired-like
homeodomain transcription factor 2
gi|3335643|gb|AAC27322.1| transcription factor Pitx2 [Gallus gallus]
Length = 333
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 47/63 (74%), Positives = 50/63 (79%), Gaps = 7/63 (11%)
Query: 29 EDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNL 88
ED+ +D S KRQRRQRTHFTSQQLQELEATF RNRYPDMSTREEIA+WTNL
Sbjct: 88 EDAGPEDPSKK-------KRQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTNL 140
Query: 89 TEA 91
TEA
Sbjct: 141 TEA 143
>gi|5668951|gb|AAD46097.1|AF077092_1 pituitary homeobox protein 2 [Gallus gallus]
Length = 271
Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 47/63 (74%), Positives = 50/63 (79%), Gaps = 7/63 (11%)
Query: 29 EDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNL 88
ED+ +D S KRQRRQRTHFTSQQLQELEATF RNRYPDMSTREEIA+WTNL
Sbjct: 26 EDAGPEDPSKK-------KRQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTNL 78
Query: 89 TEA 91
TEA
Sbjct: 79 TEA 81
>gi|395542234|ref|XP_003773038.1| PREDICTED: pituitary homeobox 2 isoform 2 [Sarcophilus harrisii]
Length = 330
Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 44/58 (75%), Positives = 50/58 (86%)
Query: 34 KDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
K+ + +++ KRQRRQRTHFTSQQLQELEATF RNRYPDMSTREEIA+WTNLTEA
Sbjct: 83 KNEDAGTEDPSKKKRQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTNLTEA 140
>gi|239937986|gb|ACS36092.1| pitx homeobox A1 [Eptatretus stoutii]
Length = 268
Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 47/59 (79%), Positives = 52/59 (88%), Gaps = 2/59 (3%)
Query: 33 AKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
A+++S + N K KRQRRQRTHFTSQQLQELEATF RNRYPDMSTREEIA+WTNLTEA
Sbjct: 30 AEETSVDDSNKK--KRQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTNLTEA 86
>gi|301756176|ref|XP_002913962.1| PREDICTED: pituitary homeobox 3-like [Ailuropoda melanoleuca]
Length = 438
Score = 95.1 bits (235), Expect = 4e-18, Method: Composition-based stats.
Identities = 48/68 (70%), Positives = 55/68 (80%), Gaps = 1/68 (1%)
Query: 24 HNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIA 83
H+DS E +SA + ++ K+QRRQRTHFTSQQLQELEATF RNRYPDMSTREEIA
Sbjct: 174 HSDS-EKASASLPGGSPEDGSLKKKQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIA 232
Query: 84 MWTNLTEA 91
+WTNLTEA
Sbjct: 233 VWTNLTEA 240
>gi|348578441|ref|XP_003474991.1| PREDICTED: pituitary homeobox 3-like [Cavia porcellus]
Length = 449
Score = 95.1 bits (235), Expect = 5e-18, Method: Composition-based stats.
Identities = 49/68 (72%), Positives = 56/68 (82%), Gaps = 1/68 (1%)
Query: 24 HNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIA 83
H+DS E +SA S+ ++ K+QRRQRTHFTSQQLQELEATF RNRYPDMSTREEIA
Sbjct: 195 HSDS-EKASASLPGSSPEDGSLKKKQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIA 253
Query: 84 MWTNLTEA 91
+WTNLTEA
Sbjct: 254 VWTNLTEA 261
>gi|301612605|ref|XP_002935807.1| PREDICTED: pituitary homeobox 3-like [Xenopus (Silurana)
tropicalis]
Length = 292
Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 46/68 (67%), Positives = 54/68 (79%)
Query: 24 HNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIA 83
H+D+ + + SN ++ K+QRRQRTHFTSQQLQELEATF RNRYPDMSTREEIA
Sbjct: 35 HSDTEKSQQNQTDDSNPEDGTLKKKQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIA 94
Query: 84 MWTNLTEA 91
+WTNLTEA
Sbjct: 95 VWTNLTEA 102
>gi|380692156|dbj|BAL72733.1| paired-like homeodomain transcription factor, partial [Eptatretus
burgeri]
Length = 196
Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 47/59 (79%), Positives = 52/59 (88%), Gaps = 2/59 (3%)
Query: 33 AKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
A+++S + N K KRQRRQRTHFTSQQLQELEATF RNRYPDMSTREEIA+WTNLTEA
Sbjct: 25 AEETSVDDSNKK--KRQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTNLTEA 81
>gi|348511922|ref|XP_003443492.1| PREDICTED: pituitary homeobox 2-like isoform 2 [Oreochromis
niloticus]
Length = 267
Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 51/75 (68%), Positives = 55/75 (73%), Gaps = 13/75 (17%)
Query: 18 KTELSNHN-DSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDM 76
K ++ N N DS +D S K KRQRRQRTHFTSQQLQELEATF RNRYPDM
Sbjct: 17 KEKIQNKNEDSSDDPSKK------------KRQRRQRTHFTSQQLQELEATFQRNRYPDM 64
Query: 77 STREEIAMWTNLTEA 91
STREEIA+WTNLTEA
Sbjct: 65 STREEIAVWTNLTEA 79
>gi|185132179|ref|NP_001117151.1| paired-like homeodomain transcription factor 3beta [Salmo salar]
gi|158380245|gb|ABW37419.1| paired-like homeodomain transcription factor 3beta [Salmo salar]
Length = 293
Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 50/76 (65%), Positives = 57/76 (75%), Gaps = 8/76 (10%)
Query: 16 NIKTELSNHNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPD 75
N TE S+ N + E SN+++ K+QRRQRTHFTSQQLQELEATF RNRYPD
Sbjct: 35 NSDTEKSHQNQTDE--------SNAEDGSLKKKQRRQRTHFTSQQLQELEATFQRNRYPD 86
Query: 76 MSTREEIAMWTNLTEA 91
MSTREEIA+WTNLTEA
Sbjct: 87 MSTREEIAVWTNLTEA 102
>gi|410957013|ref|XP_003985129.1| PREDICTED: pituitary homeobox 2 isoform 6 [Felis catus]
Length = 304
Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 48/65 (73%), Positives = 49/65 (75%), Gaps = 7/65 (10%)
Query: 34 KDSSSNSKN-------TKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWT 86
KD S KN KRQRRQRTHFTSQQLQELEATF RNRYPDMSTREEIA+WT
Sbjct: 50 KDKSQQGKNEDVGPEDPSKKKRQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWT 109
Query: 87 NLTEA 91
NLTEA
Sbjct: 110 NLTEA 114
>gi|148238060|ref|NP_001082023.1| paired-like homeodomain 3 [Xenopus laevis]
gi|10242336|gb|AAG15383.1|AF297713_1 homeodomain transcription factor Pitx-3 [Xenopus laevis]
gi|213623914|gb|AAI70394.1| Pitx3 protein [Xenopus laevis]
gi|213625259|gb|AAI70198.1| Paired-like homeodomain transcription factor 3 [Xenopus laevis]
gi|213625342|gb|AAI70392.1| Paired-like homeodomain transcription factor 3 [Xenopus laevis]
gi|213626819|gb|AAI70172.1| Paired-like homeodomain transcription factor 3 [Xenopus laevis]
Length = 292
Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 46/68 (67%), Positives = 54/68 (79%)
Query: 24 HNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIA 83
H+D+ + + SN ++ K+QRRQRTHFTSQQLQELEATF RNRYPDMSTREEIA
Sbjct: 35 HSDTEKSQQNQTDDSNPEDGTLKKKQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIA 94
Query: 84 MWTNLTEA 91
+WTNLTEA
Sbjct: 95 VWTNLTEA 102
>gi|327289193|ref|XP_003229309.1| PREDICTED: pituitary homeobox 3-like [Anolis carolinensis]
Length = 267
Score = 94.7 bits (234), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 49/83 (59%), Positives = 54/83 (65%), Gaps = 5/83 (6%)
Query: 8 LPIEPLIGNIKTELSNHNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEAT 67
+P L G TE E + DSS + + K+ RRQRTHFTSQQLQELEAT
Sbjct: 15 MPSRTLTGTPSTESGG-----EKCKSSDSSGEEEPDRGKKKPRRQRTHFTSQQLQELEAT 69
Query: 68 FARNRYPDMSTREEIAMWTNLTE 90
F RNRYPDMSTREEIA WTNLTE
Sbjct: 70 FQRNRYPDMSTREEIAGWTNLTE 92
>gi|1737167|gb|AAC16257.1| solurshin [Homo sapiens]
Length = 271
Score = 94.7 bits (234), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 47/63 (74%), Positives = 50/63 (79%), Gaps = 7/63 (11%)
Query: 29 EDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNL 88
ED A+D S KRQRRQRTHFTSQQLQ+LEATF RNRYPDMSTREEIA+WTNL
Sbjct: 26 EDVGAEDPSKK-------KRQRRQRTHFTSQQLQQLEATFQRNRYPDMSTREEIAVWTNL 78
Query: 89 TEA 91
TEA
Sbjct: 79 TEA 81
>gi|410957009|ref|XP_003985127.1| PREDICTED: pituitary homeobox 2 isoform 4 [Felis catus]
Length = 271
Score = 94.7 bits (234), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 48/65 (73%), Positives = 49/65 (75%), Gaps = 7/65 (10%)
Query: 34 KDSSSNSKN-------TKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWT 86
KD S KN KRQRRQRTHFTSQQLQELEATF RNRYPDMSTREEIA+WT
Sbjct: 17 KDKSQQGKNEDVGPEDPSKKKRQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWT 76
Query: 87 NLTEA 91
NLTEA
Sbjct: 77 NLTEA 81
>gi|345795856|ref|XP_003434087.1| PREDICTED: pituitary homeobox 2 [Canis lupus familiaris]
gi|345795858|ref|XP_003434088.1| PREDICTED: pituitary homeobox 2 [Canis lupus familiaris]
Length = 271
Score = 94.7 bits (234), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 48/65 (73%), Positives = 49/65 (75%), Gaps = 7/65 (10%)
Query: 34 KDSSSNSKN-------TKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWT 86
KD S KN KRQRRQRTHFTSQQLQELEATF RNRYPDMSTREEIA+WT
Sbjct: 17 KDKSQQGKNEDVGTEDPSKKKRQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWT 76
Query: 87 NLTEA 91
NLTEA
Sbjct: 77 NLTEA 81
>gi|410957011|ref|XP_003985128.1| PREDICTED: pituitary homeobox 2 isoform 5 [Felis catus]
Length = 286
Score = 94.7 bits (234), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 48/65 (73%), Positives = 49/65 (75%), Gaps = 7/65 (10%)
Query: 34 KDSSSNSKN-------TKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWT 86
KD S KN KRQRRQRTHFTSQQLQELEATF RNRYPDMSTREEIA+WT
Sbjct: 32 KDKSQQGKNEDVGPEDPSKKKRQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWT 91
Query: 87 NLTEA 91
NLTEA
Sbjct: 92 NLTEA 96
>gi|348564619|ref|XP_003468102.1| PREDICTED: pituitary homeobox 2-like [Cavia porcellus]
Length = 613
Score = 94.7 bits (234), Expect = 6e-18, Method: Composition-based stats.
Identities = 50/74 (67%), Positives = 55/74 (74%), Gaps = 7/74 (9%)
Query: 25 NDSIEDSSAKDSSSNSKNT-------KNSKRQRRQRTHFTSQQLQELEATFARNRYPDMS 77
+ S +++ KD S SKN KRQRRQRTHFTSQQLQELEATF RNRYPDMS
Sbjct: 350 DTSSPEAAEKDKSQQSKNEDVGAEDPSKKKRQRRQRTHFTSQQLQELEATFQRNRYPDMS 409
Query: 78 TREEIAMWTNLTEA 91
TREEIA+WTNLTEA
Sbjct: 410 TREEIAVWTNLTEA 423
>gi|45581379|dbj|BAD12775.1| Pitx homologue [Lethenteron camtschaticum]
Length = 199
Score = 94.7 bits (234), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 44/60 (73%), Positives = 49/60 (81%)
Query: 32 SAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
+ K + ++ KRQRRQRTHFTSQQLQELEATF RNRYPDMSTREEIA+WTNLTEA
Sbjct: 7 AGKADEAGGEDPSKKKRQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTNLTEA 66
>gi|56694820|gb|AAW23072.1| Pitx [Oikopleura dioica]
Length = 296
Score = 94.7 bits (234), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 49/93 (52%), Positives = 57/93 (61%), Gaps = 14/93 (15%)
Query: 13 LIGNIKTEL--------------SNHNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTS 58
L+ ++KTE+ SN + S + K+QRRQRTHFTS
Sbjct: 23 LVSDVKTEIHGVELGVEPYPEVNSNPSGSPPGVEEDKDEDKVDDDGKPKKQRRQRTHFTS 82
Query: 59 QQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
QQLQELE+ FARNRYPDMSTREEIAMWTNLTEA
Sbjct: 83 QQLQELESLFARNRYPDMSTREEIAMWTNLTEA 115
>gi|348511920|ref|XP_003443491.1| PREDICTED: pituitary homeobox 2-like isoform 1 [Oreochromis
niloticus]
Length = 313
Score = 94.7 bits (234), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 51/75 (68%), Positives = 55/75 (73%), Gaps = 13/75 (17%)
Query: 18 KTELSNHN-DSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDM 76
K ++ N N DS +D S K KRQRRQRTHFTSQQLQELEATF RNRYPDM
Sbjct: 63 KEKIQNKNEDSSDDPSKK------------KRQRRQRTHFTSQQLQELEATFQRNRYPDM 110
Query: 77 STREEIAMWTNLTEA 91
STREEIA+WTNLTEA
Sbjct: 111 STREEIAVWTNLTEA 125
>gi|185132152|ref|NP_001117150.1| paired-like homeodomain transcription factor 3alpha [Salmo salar]
gi|158380243|gb|ABW37418.1| paired-like homeodomain transcription factor 3alpha [Salmo salar]
Length = 293
Score = 94.4 bits (233), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 50/76 (65%), Positives = 57/76 (75%), Gaps = 8/76 (10%)
Query: 16 NIKTELSNHNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPD 75
N TE S+ N + E SN+++ K+QRRQRTHFTSQQLQELEATF RNRYPD
Sbjct: 35 NSDTEKSHQNQTDE--------SNTEDGSLKKKQRRQRTHFTSQQLQELEATFQRNRYPD 86
Query: 76 MSTREEIAMWTNLTEA 91
MSTREEIA+WTNLTEA
Sbjct: 87 MSTREEIAVWTNLTEA 102
>gi|145309208|gb|ABP57806.1| homeodomain transcription factor 2 isoform c [Rattus norvegicus]
Length = 152
Score = 94.4 bits (233), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 48/63 (76%), Positives = 50/63 (79%), Gaps = 7/63 (11%)
Query: 29 EDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNL 88
ED A+D S KRQRRQRTHFTSQQLQELEATF RNRYPDMSTREEIA+WTNL
Sbjct: 25 EDVGAEDPSK-------KKRQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTNL 77
Query: 89 TEA 91
TEA
Sbjct: 78 TEA 80
>gi|49660016|gb|AAT68296.1| Pitx3 [Danio rerio]
Length = 293
Score = 94.4 bits (233), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 50/76 (65%), Positives = 56/76 (73%), Gaps = 8/76 (10%)
Query: 16 NIKTELSNHNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPD 75
N TE S+ N + E SN ++ K+QRRQRTHFTSQQLQELEATF RNRYPD
Sbjct: 35 NSDTEKSHQNHTDE--------SNPEDGSLKKKQRRQRTHFTSQQLQELEATFQRNRYPD 86
Query: 76 MSTREEIAMWTNLTEA 91
MSTREEIA+WTNLTEA
Sbjct: 87 MSTREEIAVWTNLTEA 102
>gi|313221620|emb|CBY36107.1| unnamed protein product [Oikopleura dioica]
Length = 421
Score = 94.4 bits (233), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 42/45 (93%), Positives = 44/45 (97%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
K+QRRQRTHFTSQQLQELE+ FARNRYPDMSTREEIAMWTNLTEA
Sbjct: 152 KKQRRQRTHFTSQQLQELESLFARNRYPDMSTREEIAMWTNLTEA 196
>gi|148232934|ref|NP_001079212.1| pituitary homeobox 3 [Xenopus laevis]
gi|18203019|sp|Q9I8K3.1|PITX3_XENLA RecName: Full=Pituitary homeobox 3; AltName: Full=Homeobox protein
PITX3; Short=XPitx-3; Short=xPitx3; AltName:
Full=Paired-like homeodomain transcription factor 3
gi|9716650|gb|AAF97592.1|AF265671_1 paired-like homeodomain transcription factor Pitx3 [Xenopus laevis]
Length = 292
Score = 94.4 bits (233), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 46/68 (67%), Positives = 54/68 (79%)
Query: 24 HNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIA 83
H+D+ + + SN ++ K+QRRQRTHFTSQQLQELEATF RNRYPDMSTREEIA
Sbjct: 35 HSDTEKSQQNQTDDSNPEDGILKKKQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIA 94
Query: 84 MWTNLTEA 91
+WTNLTEA
Sbjct: 95 VWTNLTEA 102
>gi|158256614|dbj|BAF84280.1| unnamed protein product [Homo sapiens]
Length = 271
Score = 94.0 bits (232), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 47/62 (75%), Positives = 49/62 (79%), Gaps = 7/62 (11%)
Query: 29 EDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNL 88
ED A+D S KRQRRQRTHFTSQQLQELEATF RNRYPDMSTREEIA+WTNL
Sbjct: 26 EDVGAEDPSKK-------KRQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTNL 78
Query: 89 TE 90
TE
Sbjct: 79 TE 80
>gi|45387769|ref|NP_991238.1| pituitary homeobox 3 [Danio rerio]
gi|82237957|sp|Q6QU75.1|PITX3_DANRE RecName: Full=Pituitary homeobox 3; AltName: Full=Bicoid-like
homeodomain transcription factor Pitx3; AltName:
Full=Homeobox protein PITX3; AltName: Full=Paired-like
homeodomain transcription factor 3
gi|41059121|gb|AAR98874.1| paired-like homeodomain transcription factor 3 [Danio rerio]
gi|50254062|gb|AAT72155.1| bicoid-like homeodomain transcription factor Pitx3 [Danio rerio]
gi|63101378|gb|AAH94961.1| Paired-like homeodomain transcription factor 3 [Danio rerio]
gi|182889542|gb|AAI65321.1| Pitx3 protein [Danio rerio]
Length = 293
Score = 94.0 bits (232), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 50/76 (65%), Positives = 56/76 (73%), Gaps = 8/76 (10%)
Query: 16 NIKTELSNHNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPD 75
N TE S+ N + E SN ++ K+QRRQRTHFTSQQLQELEATF RNRYPD
Sbjct: 35 NSDTEKSHQNHTDE--------SNPEDGSLKKKQRRQRTHFTSQQLQELEATFQRNRYPD 86
Query: 76 MSTREEIAMWTNLTEA 91
MSTREEIA+WTNLTEA
Sbjct: 87 MSTREEIAVWTNLTEA 102
>gi|126273196|ref|XP_001369387.1| PREDICTED: pituitary homeobox 3-like [Monodelphis domestica]
Length = 305
Score = 94.0 bits (232), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 44/68 (64%), Positives = 52/68 (76%)
Query: 24 HNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIA 83
H+D+ + S +++ K+QRRQRTHFTSQQLQELEATF RNRYPDMSTREEIA
Sbjct: 38 HSDTEKAPPQLPGGSPTEDGSLKKKQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIA 97
Query: 84 MWTNLTEA 91
+WT LTEA
Sbjct: 98 VWTTLTEA 105
>gi|47221758|emb|CAG08812.1| unnamed protein product [Tetraodon nigroviridis]
Length = 408
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/63 (71%), Positives = 51/63 (80%)
Query: 29 EDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNL 88
E S+ + S + + K+QRRQRTHFTSQQLQELEATF RNRYPDMSTREEIA+WTNL
Sbjct: 68 ERSAEQRSDDGAADDPKKKKQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTNL 127
Query: 89 TEA 91
TEA
Sbjct: 128 TEA 130
>gi|71068423|gb|AAZ23132.1| pituitary homeobox transcript variant 1 [Oikopleura dioica]
gi|71068428|gb|AAZ23136.1| pituitary homeobox transcript variant 1 [Oikopleura dioica]
Length = 426
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 42/45 (93%), Positives = 44/45 (97%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
K+QRRQRTHFTSQQLQELE+ FARNRYPDMSTREEIAMWTNLTEA
Sbjct: 153 KKQRRQRTHFTSQQLQELESLFARNRYPDMSTREEIAMWTNLTEA 197
>gi|348535087|ref|XP_003455033.1| PREDICTED: pituitary homeobox 3-like [Oreochromis niloticus]
Length = 295
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/73 (68%), Positives = 56/73 (76%), Gaps = 8/73 (10%)
Query: 19 TELSNHNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMST 78
TE S N +++SS +D S K+QRRQRTHFTSQQLQELEATF RNRYPDMST
Sbjct: 38 TEKSQQNQ-LDESSTEDGSLK-------KKQRRQRTHFTSQQLQELEATFQRNRYPDMST 89
Query: 79 REEIAMWTNLTEA 91
REEIA+WTNLTEA
Sbjct: 90 REEIAVWTNLTEA 102
>gi|284930233|gb|ABN48541.2| transcription factor Pitx2 I [Cyprinus carpio]
Length = 275
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/45 (95%), Positives = 44/45 (97%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
KRQRRQRTHFTSQQLQELEATF RNRYPDMSTREEIA+WTNLTEA
Sbjct: 1 KRQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTNLTEA 45
>gi|110826332|gb|ABH01135.1| Pitx1 splice variant a [Gasterosteus aculeatus]
gi|110826336|gb|ABH01137.1| Pitx1 splice variant a [Gasterosteus aculeatus]
gi|262091683|gb|ACY25276.1| pituitary homeobox 1 variant a [Gasterosteus aculeatus]
Length = 300
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/90 (56%), Positives = 58/90 (64%), Gaps = 6/90 (6%)
Query: 8 LPIEPLIGNIKTELSNHNDSIEDSSAKD------SSSNSKNTKNSKRQRRQRTHFTSQQL 61
LP P G E S+ S + K+ S + + K+QRRQRTHFTSQQL
Sbjct: 38 LPRAPRGGRGGVENSSSESSDAEPPEKERGAEPRSDDGTADDPKKKKQRRQRTHFTSQQL 97
Query: 62 QELEATFARNRYPDMSTREEIAMWTNLTEA 91
QELEATF RNRYPDMSTREEIA+WTNLTEA
Sbjct: 98 QELEATFQRNRYPDMSTREEIAVWTNLTEA 127
>gi|46393908|gb|AAS91492.1| transcription factor [Gasterosteus aculeatus]
gi|262091684|gb|ACY25277.1| pituitary homeobox 1 variant b [Gasterosteus aculeatus]
Length = 283
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/90 (56%), Positives = 58/90 (64%), Gaps = 6/90 (6%)
Query: 8 LPIEPLIGNIKTELSNHNDSIEDSSAKD------SSSNSKNTKNSKRQRRQRTHFTSQQL 61
LP P G E S+ S + K+ S + + K+QRRQRTHFTSQQL
Sbjct: 21 LPRAPRGGRGGVENSSSESSDAEPPEKERGAEPRSDDGTADDPKKKKQRRQRTHFTSQQL 80
Query: 62 QELEATFARNRYPDMSTREEIAMWTNLTEA 91
QELEATF RNRYPDMSTREEIA+WTNLTEA
Sbjct: 81 QELEATFQRNRYPDMSTREEIAVWTNLTEA 110
>gi|297595306|gb|ADI48168.1| Pitx [Crepidula fornicata]
Length = 369
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/60 (71%), Positives = 48/60 (80%)
Query: 32 SAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
K +N + KRQRRQRTHFTSQQLQELEATFARNRYPDM+TREEI+ WTNL+EA
Sbjct: 117 GGKVDENNGEGDGKKKRQRRQRTHFTSQQLQELEATFARNRYPDMATREEISAWTNLSEA 176
>gi|110826324|gb|ABH01131.1| Pitx1 splice variant a [Pungitius pungitius]
gi|110826328|gb|ABH01133.1| Pitx1 splice variant a [Pungitius pungitius]
Length = 324
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 42/45 (93%), Positives = 44/45 (97%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
K+QRRQRTHFTSQQLQELEATF RNRYPDMSTREEIA+WTNLTEA
Sbjct: 108 KKQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTNLTEA 152
>gi|410915110|ref|XP_003971030.1| PREDICTED: pituitary homeobox 1-like isoform 2 [Takifugu
rubripes]
Length = 265
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/74 (63%), Positives = 55/74 (74%)
Query: 18 KTELSNHNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMS 77
K +S + E S+ + S + + K+QRRQRTHFTSQQLQELEATF RNRYPDMS
Sbjct: 7 KNGISCVDPEKERSAEQRSDDGNADDPKKKKQRRQRTHFTSQQLQELEATFQRNRYPDMS 66
Query: 78 TREEIAMWTNLTEA 91
TREEIA+WTNLTEA
Sbjct: 67 TREEIAVWTNLTEA 80
>gi|25137559|gb|AAN73037.1| Pitx2 [Oryctolagus cuniculus]
Length = 213
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/45 (95%), Positives = 44/45 (97%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
KRQRRQRTHFTSQQLQELEATF RNRYPDMSTREEIA+WTNLTEA
Sbjct: 7 KRQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTNLTEA 51
>gi|110826326|gb|ABH01132.1| Pitx1 splice variant b [Pungitius pungitius]
gi|110826330|gb|ABH01134.1| Pitx1 splice variant b [Pungitius pungitius]
Length = 276
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 42/45 (93%), Positives = 44/45 (97%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
K+QRRQRTHFTSQQLQELEATF RNRYPDMSTREEIA+WTNLTEA
Sbjct: 60 KKQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTNLTEA 104
>gi|156550319|ref|XP_001603592.1| PREDICTED: pituitary homeobox homolog Ptx1-like [Nasonia
vitripennis]
Length = 531
Score = 93.2 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 45/53 (84%), Positives = 49/53 (92%)
Query: 39 NSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
+ K+ K KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWT+L+EA
Sbjct: 200 DDKDGKKGKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTSLSEA 252
>gi|71068424|gb|AAZ23133.1| pituitary homeobox transcript variant 2 [Oikopleura dioica]
gi|71068430|gb|AAZ23137.1| pituitary homeobox transcript variant 2 [Oikopleura dioica]
Length = 340
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 42/45 (93%), Positives = 44/45 (97%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
K+QRRQRTHFTSQQLQELE+ FARNRYPDMSTREEIAMWTNLTEA
Sbjct: 153 KKQRRQRTHFTSQQLQELESLFARNRYPDMSTREEIAMWTNLTEA 197
>gi|410915108|ref|XP_003971029.1| PREDICTED: pituitary homeobox 1-like isoform 1 [Takifugu rubripes]
Length = 315
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/63 (71%), Positives = 51/63 (80%)
Query: 29 EDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNL 88
E S+ + S + + K+QRRQRTHFTSQQLQELEATF RNRYPDMSTREEIA+WTNL
Sbjct: 68 ERSAEQRSDDGNADDPKKKKQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTNL 127
Query: 89 TEA 91
TEA
Sbjct: 128 TEA 130
>gi|348527908|ref|XP_003451461.1| PREDICTED: pituitary homeobox 1-like [Oreochromis niloticus]
Length = 378
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 42/45 (93%), Positives = 44/45 (97%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
K+QRRQRTHFTSQQLQELEATF RNRYPDMSTREEIA+WTNLTEA
Sbjct: 149 KKQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTNLTEA 193
>gi|432895659|ref|XP_004076098.1| PREDICTED: pituitary homeobox 1-like isoform 1 [Oryzias latipes]
Length = 316
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 42/45 (93%), Positives = 44/45 (97%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
K+QRRQRTHFTSQQLQELEATF RNRYPDMSTREEIA+WTNLTEA
Sbjct: 87 KKQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTNLTEA 131
>gi|92098338|gb|AAI15353.1| Paired-like homeodomain transcription factor 1 [Danio rerio]
Length = 281
Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/73 (65%), Positives = 55/73 (75%), Gaps = 4/73 (5%)
Query: 19 TELSNHNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMST 78
TE + S+E S ++ + K K+QRRQRTHFTSQQLQELEATF RNRYPDMST
Sbjct: 28 TEAAEKERSVEQRSDDGNADDPKK----KKQRRQRTHFTSQQLQELEATFQRNRYPDMST 83
Query: 79 REEIAMWTNLTEA 91
REEIA+WTNLTEA
Sbjct: 84 REEIAVWTNLTEA 96
>gi|183207891|gb|ACC59092.1| paired-like homeodomain transcription factor 1 [Danio rerio]
Length = 285
Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/73 (65%), Positives = 55/73 (75%), Gaps = 4/73 (5%)
Query: 19 TELSNHNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMST 78
TE + S+E S ++ + K K+QRRQRTHFTSQQLQELEATF RNRYPDMST
Sbjct: 32 TEAAEKERSVEQRSDDGNADDPKK----KKQRRQRTHFTSQQLQELEATFQRNRYPDMST 87
Query: 79 REEIAMWTNLTEA 91
REEIA+WTNLTEA
Sbjct: 88 REEIAVWTNLTEA 100
>gi|165973350|ref|NP_001035436.3| pituitary homeobox 1 [Danio rerio]
gi|158380249|gb|ABW37421.1| paired-like homeodomain transcription factor 1 [Danio rerio]
Length = 285
Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/73 (65%), Positives = 55/73 (75%), Gaps = 4/73 (5%)
Query: 19 TELSNHNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMST 78
TE + S+E S ++ + K K+QRRQRTHFTSQQLQELEATF RNRYPDMST
Sbjct: 32 TEAAEKERSVEQRSDDGNADDPKK----KKQRRQRTHFTSQQLQELEATFQRNRYPDMST 87
Query: 79 REEIAMWTNLTEA 91
REEIA+WTNLTEA
Sbjct: 88 REEIAVWTNLTEA 100
>gi|432895661|ref|XP_004076099.1| PREDICTED: pituitary homeobox 1-like isoform 2 [Oryzias latipes]
Length = 265
Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 42/45 (93%), Positives = 44/45 (97%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
K+QRRQRTHFTSQQLQELEATF RNRYPDMSTREEIA+WTNLTEA
Sbjct: 36 KKQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTNLTEA 80
>gi|390407701|ref|NP_001254576.1| pituitary homeobox 1 [Gasterosteus aculeatus]
gi|110826334|gb|ABH01136.1| Pitx1 splice variant b [Gasterosteus aculeatus]
gi|110826338|gb|ABH01138.1| Pitx1 splice variant b [Gasterosteus aculeatus]
Length = 253
Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/74 (62%), Positives = 53/74 (71%)
Query: 18 KTELSNHNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMS 77
K +S + E + S + + K+QRRQRTHFTSQQLQELEATF RNRYPDMS
Sbjct: 7 KNVISGADAEKERGAEPRSDDGTADDPKKKKQRRQRTHFTSQQLQELEATFQRNRYPDMS 66
Query: 78 TREEIAMWTNLTEA 91
TREEIA+WTNLTEA
Sbjct: 67 TREEIAVWTNLTEA 80
>gi|345326816|ref|XP_003431087.1| PREDICTED: pituitary homeobox 2-like [Ornithorhynchus anatinus]
Length = 393
Score = 92.4 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 44/63 (69%), Positives = 51/63 (80%)
Query: 29 EDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNL 88
+ K+ + +++ KRQRRQRTHFTSQQLQELEATF RNRYPDMSTREEIA+WTNL
Sbjct: 87 KSQQGKNEDAGAEDPSKKKRQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTNL 146
Query: 89 TEA 91
TEA
Sbjct: 147 TEA 149
>gi|345327886|ref|XP_001510780.2| PREDICTED: pituitary homeobox 1-like [Ornithorhynchus anatinus]
Length = 294
Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/91 (57%), Positives = 61/91 (67%), Gaps = 3/91 (3%)
Query: 2 LERGRILPIEPLIGNIKTELSNHNDSIEDSS--AKDSSSNSKNTKNSKRQRRQRTHFTSQ 59
L R P EPL N +E S+ ++ S AK +++ K+QRRQRTHFTSQ
Sbjct: 43 LPRSAADPREPLE-NSASESSDTETPEKERSGEAKSEDGGAEDPAKKKKQRRQRTHFTSQ 101
Query: 60 QLQELEATFARNRYPDMSTREEIAMWTNLTE 90
QLQELEATF RNRYPDMS REEIA+WTNLTE
Sbjct: 102 QLQELEATFQRNRYPDMSMREEIAVWTNLTE 132
>gi|17380175|sp|Q9W751.1|PITX1_XENLA RecName: Full=Pituitary homeobox 1; AltName: Full=Homeobox protein
PITX1; Short=X-PITX-1; Short=xPitx1; AltName:
Full=Paired-like homeodomain transcription factor 1
gi|5566001|gb|AAD45292.1|AF155206_1 homeodomain transcription factor Pitx-1 [Xenopus laevis]
Length = 305
Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/58 (74%), Positives = 46/58 (79%)
Query: 34 KDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
K N + K+QRRQRTHFTSQQLQELEATF RNRYPDMS REEIA+WTNLTEA
Sbjct: 63 KGEDGNGDDPSKKKKQRRQRTHFTSQQLQELEATFQRNRYPDMSMREEIAVWTNLTEA 120
>gi|148233752|ref|NP_001080981.1| pituitary homeobox 1 [Xenopus laevis]
gi|6851371|gb|AAF29531.1|AF217647_1 pituitary homeobox gene 1 paired-like homeodomain transcription
factor [Xenopus laevis]
gi|213624932|gb|AAI69446.1| Pituitary homeobox gene 1 paired-likehomeodomain transcription
factor [Xenopus laevis]
gi|213625070|gb|AAI69749.1| Pitx1 protein [Xenopus laevis]
gi|213626444|gb|AAI69444.1| Pituitary homeobox gene 1 paired-likehomeodomain transcription
factor [Xenopus laevis]
gi|213626626|gb|AAI69747.1| Pitx1 protein [Xenopus laevis]
Length = 305
Score = 92.0 bits (227), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/58 (74%), Positives = 46/58 (79%)
Query: 34 KDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
K N + K+QRRQRTHFTSQQLQELEATF RNRYPDMS REEIA+WTNLTEA
Sbjct: 63 KGEDGNGDDPSKKKKQRRQRTHFTSQQLQELEATFQRNRYPDMSMREEIAVWTNLTEA 120
>gi|148539550|ref|NP_001091900.1| pituitary homeobox 1 [Xenopus laevis]
gi|10798738|emb|CAC12834.1| Pitx1 protein [Xenopus laevis]
Length = 305
Score = 92.0 bits (227), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/58 (74%), Positives = 46/58 (79%)
Query: 34 KDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
K N + K+QRRQRTHFTSQQLQELEATF RNRYPDMS REEIA+WTNLTEA
Sbjct: 63 KGEDGNGDDPSKKKKQRRQRTHFTSQQLQELEATFQRNRYPDMSMREEIAVWTNLTEA 120
>gi|110748620|gb|ABG89863.1| Pitx2 splice variant a [Astyanax mexicanus]
Length = 260
Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 42/45 (93%), Positives = 43/45 (95%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
KRQRRQRTHFTS QLQELEATF RNRYPDMSTREEIA+WTNLTEA
Sbjct: 34 KRQRRQRTHFTSAQLQELEATFQRNRYPDMSTREEIAVWTNLTEA 78
>gi|55926080|ref|NP_001007500.1| paired-like homeodomain 1 [Xenopus (Silurana) tropicalis]
gi|51258792|gb|AAH79936.1| paired-like homeodomain 1 [Xenopus (Silurana) tropicalis]
Length = 305
Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 43/58 (74%), Positives = 46/58 (79%)
Query: 34 KDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
K N + K+QRRQRTHFTSQQLQELEATF RNRYPDMS REEIA+WTNLTEA
Sbjct: 63 KGEDGNGDDPTKKKKQRRQRTHFTSQQLQELEATFQRNRYPDMSMREEIAVWTNLTEA 120
>gi|346986283|ref|NP_001231299.1| pituitary homeobox 1 [Sus scrofa]
gi|336092211|gb|AEI00729.1| paired-like homeodomain 1 [Sus scrofa]
Length = 314
Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 48/78 (61%), Positives = 54/78 (69%), Gaps = 6/78 (7%)
Query: 19 TELSNHNDSIEDSSAKDSSSNS------KNTKNSKRQRRQRTHFTSQQLQELEATFARNR 72
TEL S E +DSS+ ++ K+QRRQRTHFTSQQLQELEATF RNR
Sbjct: 53 TELPEKERSGEPKGPEDSSAGGAGCGGAEDPAKKKKQRRQRTHFTSQQLQELEATFQRNR 112
Query: 73 YPDMSTREEIAMWTNLTE 90
YPDMS REEIA+WTNLTE
Sbjct: 113 YPDMSMREEIAVWTNLTE 130
>gi|185133831|ref|NP_001117173.1| paired-like homeodomain transcription factor 1beta [Salmo salar]
gi|158380233|gb|ABW37413.1| paired-like homeodomain transcription factor 1beta [Salmo salar]
Length = 316
Score = 91.7 bits (226), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 47/73 (64%), Positives = 55/73 (75%), Gaps = 4/73 (5%)
Query: 19 TELSNHNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMST 78
TE++ S+E S ++ + K K+ RRQRTHFTSQQLQELEATF RNRYPDMST
Sbjct: 62 TEITEKERSVEHRSDDGNADDPKK----KKARRQRTHFTSQQLQELEATFQRNRYPDMST 117
Query: 79 REEIAMWTNLTEA 91
REEIA+WTNLTEA
Sbjct: 118 REEIAVWTNLTEA 130
>gi|47207934|emb|CAF90371.1| unnamed protein product [Tetraodon nigroviridis]
Length = 316
Score = 91.3 bits (225), Expect = 7e-17, Method: Composition-based stats.
Identities = 51/73 (69%), Positives = 57/73 (78%), Gaps = 8/73 (10%)
Query: 19 TELSNHNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMST 78
TE S N +++SSA+D S K+QRRQRTHFTSQQLQELEATF RNRYPDMST
Sbjct: 2 TEKSQQN-QLDESSAEDGSLK-------KKQRRQRTHFTSQQLQELEATFQRNRYPDMST 53
Query: 79 REEIAMWTNLTEA 91
REEIA+WTNLTEA
Sbjct: 54 REEIAVWTNLTEA 66
>gi|395504318|ref|XP_003756501.1| PREDICTED: pituitary homeobox 1 [Sarcophilus harrisii]
Length = 306
Score = 90.9 bits (224), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 46/72 (63%), Positives = 51/72 (70%), Gaps = 2/72 (2%)
Query: 19 TELSNHNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMST 78
TE+ S E ++D K K+QRRQRTHFTSQQLQELEATF RNRYPDMS
Sbjct: 51 TEVPEKERSGETKGSEDGGGEDPAKK--KKQRRQRTHFTSQQLQELEATFQRNRYPDMSM 108
Query: 79 REEIAMWTNLTE 90
REEIA+WTNLTE
Sbjct: 109 REEIAVWTNLTE 120
>gi|355749509|gb|EHH53908.1| hypothetical protein EGM_14619 [Macaca fascicularis]
Length = 374
Score = 90.9 bits (224), Expect = 1e-16, Method: Composition-based stats.
Identities = 44/59 (74%), Positives = 49/59 (83%)
Query: 33 AKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
K+ +++ KRQRRQRTHFTSQQLQELEATF RNRYPDMSTREEIA+WTNLTEA
Sbjct: 126 GKNEDVGAEDPSKKKRQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTNLTEA 184
>gi|327274066|ref|XP_003221799.1| PREDICTED: pituitary homeobox 2-like isoform 2 [Anolis
carolinensis]
Length = 317
Score = 90.9 bits (224), Expect = 1e-16, Method: Composition-based stats.
Identities = 45/67 (67%), Positives = 53/67 (79%)
Query: 25 NDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAM 84
N+ + +K+ +++ KRQRRQRTHFTSQQLQELEATF RNRYPDMSTREEIA+
Sbjct: 61 NEKDKSQPSKNEEPGAEDPSKKKRQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAV 120
Query: 85 WTNLTEA 91
WTNLTEA
Sbjct: 121 WTNLTEA 127
>gi|158380237|gb|ABW37415.1| paired-like homeodomain transcription factor 1beta [Salmo salar]
Length = 266
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 41/45 (91%), Positives = 43/45 (95%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
K+ RRQRTHFTSQQLQELEATF RNRYPDMSTREEIA+WTNLTEA
Sbjct: 36 KKARRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTNLTEA 80
>gi|327278492|ref|XP_003223996.1| PREDICTED: pituitary homeobox 1-like [Anolis carolinensis]
Length = 166
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/72 (62%), Positives = 53/72 (73%), Gaps = 2/72 (2%)
Query: 19 TELSNHNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMST 78
TE+ + + S D +++ K K+QRRQRTHFTSQQLQELEATF RNRYPDMS
Sbjct: 53 TEVPDKDRVGVPKSGDDGAADDPTKK--KKQRRQRTHFTSQQLQELEATFQRNRYPDMSM 110
Query: 79 REEIAMWTNLTE 90
REEIA+WTNLTE
Sbjct: 111 REEIAVWTNLTE 122
>gi|185135897|ref|NP_001117184.1| paired-like homeodomain transcription factor 1alpha-like [Salmo
salar]
gi|158380235|gb|ABW37414.1| paired-like homeodomain transcription factor 1alpha [Salmo salar]
Length = 265
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 41/45 (91%), Positives = 43/45 (95%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
K+ RRQRTHFTSQQLQELEATF RNRYPDMSTREEIA+WTNLTEA
Sbjct: 36 KKARRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTNLTEA 80
>gi|149025925|gb|EDL82168.1| paired-like homeodomain transcription factor 2, isoform CRA_a
[Rattus norvegicus]
Length = 317
Score = 90.5 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 45/67 (67%), Positives = 52/67 (77%)
Query: 25 NDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAM 84
N+ + K+ +++ KRQRRQRTHFTSQQLQELEATF RNRYPDMSTREEIA+
Sbjct: 61 NEKDKGQQGKNEDVGAEDPSKKKRQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAV 120
Query: 85 WTNLTEA 91
WTNLTEA
Sbjct: 121 WTNLTEA 127
>gi|403256605|ref|XP_003920957.1| PREDICTED: uncharacterized protein LOC101038269 [Saimiri
boliviensis boliviensis]
Length = 586
Score = 90.5 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 46/73 (63%), Positives = 53/73 (72%), Gaps = 1/73 (1%)
Query: 19 TELSNHNDSIEDSSAKDSSSN-SKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMS 77
TEL E +DS + +++ K+QRRQRTHFTSQQLQELEATF RNRYPDMS
Sbjct: 121 TELPEKERGGEPKGPEDSGAGGAEDPAKKKKQRRQRTHFTSQQLQELEATFQRNRYPDMS 180
Query: 78 TREEIAMWTNLTE 90
REEIA+WTNLTE
Sbjct: 181 MREEIAVWTNLTE 193
>gi|185132206|ref|NP_001117153.1| paired-like homeodomain transcription factor 1alpha [Salmo salar]
gi|158380231|gb|ABW37412.1| paired-like homeodomain transcription factor 1alpha [Salmo salar]
Length = 316
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 41/45 (91%), Positives = 43/45 (95%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
K+ RRQRTHFTSQQLQELEATF RNRYPDMSTREEIA+WTNLTEA
Sbjct: 87 KKARRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTNLTEA 131
>gi|354504451|ref|XP_003514289.1| PREDICTED: pituitary homeobox 2-like isoform 2 [Cricetulus griseus]
Length = 315
Score = 90.1 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 45/67 (67%), Positives = 52/67 (77%)
Query: 25 NDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAM 84
N+ + K+ +++ KRQRRQRTHFTSQQLQELEATF RNRYPDMSTREEIA+
Sbjct: 61 NEKDKGQQGKNEDVGAEDPSKKKRQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAV 120
Query: 85 WTNLTEA 91
WTNLTEA
Sbjct: 121 WTNLTEA 127
>gi|267844835|ref|NP_001161156.1| pituitary homeobox 1 [Gallus gallus]
gi|267844837|ref|NP_001161157.1| pituitary homeobox 1 [Gallus gallus]
gi|267844839|ref|NP_001161158.1| pituitary homeobox 1 [Gallus gallus]
Length = 302
Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/62 (70%), Positives = 48/62 (77%), Gaps = 7/62 (11%)
Query: 29 EDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNL 88
ED +A D + K+QRRQRTHFTSQQLQELEATF RNRYPDMS REEIA+WTNL
Sbjct: 65 EDGAADDPAKK-------KKQRRQRTHFTSQQLQELEATFQRNRYPDMSMREEIAVWTNL 117
Query: 89 TE 90
TE
Sbjct: 118 TE 119
>gi|24234708|ref|NP_700475.1| pituitary homeobox 2 isoform b [Homo sapiens]
gi|324710992|ref|NP_001191326.1| pituitary homeobox 2 isoform b [Homo sapiens]
gi|324710994|ref|NP_001191327.1| pituitary homeobox 2 isoform b [Homo sapiens]
gi|397519871|ref|XP_003830076.1| PREDICTED: pituitary homeobox 2 isoform 2 [Pan paniscus]
gi|6174907|sp|Q99697.2|PITX2_HUMAN RecName: Full=Pituitary homeobox 2; AltName: Full=ALL1-responsive
protein ARP1; AltName: Full=Homeobox protein PITX2;
AltName: Full=Paired-like homeodomain transcription
factor 2; AltName: Full=RIEG bicoid-related homeobox
transcription factor; AltName: Full=Solurshin
gi|3078009|gb|AAC39717.1| ALL1 responsive protein ARP1b [Homo sapiens]
gi|119626667|gb|EAX06262.1| paired-like homeodomain transcription factor 2, isoform CRA_a [Homo
sapiens]
gi|193785429|dbj|BAG54582.1| unnamed protein product [Homo sapiens]
gi|410342051|gb|JAA39972.1| paired-like homeodomain 2 [Pan troglodytes]
Length = 317
Score = 90.1 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 45/67 (67%), Positives = 52/67 (77%)
Query: 25 NDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAM 84
N+ + K+ +++ KRQRRQRTHFTSQQLQELEATF RNRYPDMSTREEIA+
Sbjct: 61 NEKDKSQQGKNEDVGAEDPSKKKRQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAV 120
Query: 85 WTNLTEA 91
WTNLTEA
Sbjct: 121 WTNLTEA 127
>gi|224068062|ref|XP_002187978.1| PREDICTED: pituitary homeobox 1 isoform 1 [Taeniopygia guttata]
gi|449475013|ref|XP_004175459.1| PREDICTED: pituitary homeobox 1 isoform 2 [Taeniopygia guttata]
Length = 302
Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/62 (70%), Positives = 48/62 (77%), Gaps = 7/62 (11%)
Query: 29 EDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNL 88
ED +A D + K+QRRQRTHFTSQQLQELEATF RNRYPDMS REEIA+WTNL
Sbjct: 65 EDGAADDPAKK-------KKQRRQRTHFTSQQLQELEATFQRNRYPDMSMREEIAVWTNL 117
Query: 89 TE 90
TE
Sbjct: 118 TE 119
>gi|338722603|ref|XP_003364573.1| PREDICTED: pituitary homeobox 2 [Equus caballus]
gi|338722605|ref|XP_003364574.1| PREDICTED: pituitary homeobox 2 [Equus caballus]
Length = 317
Score = 90.1 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 45/67 (67%), Positives = 52/67 (77%)
Query: 25 NDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAM 84
N+ + K+ +++ KRQRRQRTHFTSQQLQELEATF RNRYPDMSTREEIA+
Sbjct: 61 NEKEKSQQGKNEDVGAEDPSKKKRQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAV 120
Query: 85 WTNLTEA 91
WTNLTEA
Sbjct: 121 WTNLTEA 127
>gi|109075372|ref|XP_001090922.1| PREDICTED: pituitary homeobox 2-like isoform 1 [Macaca mulatta]
gi|109075374|ref|XP_001091045.1| PREDICTED: pituitary homeobox 2-like isoform 2 [Macaca mulatta]
Length = 317
Score = 90.1 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 45/67 (67%), Positives = 52/67 (77%)
Query: 25 NDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAM 84
N+ + K+ +++ KRQRRQRTHFTSQQLQELEATF RNRYPDMSTREEIA+
Sbjct: 61 NEKDKGQQGKNEDVGAEDPSKKKRQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAV 120
Query: 85 WTNLTEA 91
WTNLTEA
Sbjct: 121 WTNLTEA 127
>gi|3236450|gb|AAC23684.1| paired-like homeodomain transcription factor Ptx1 [Gallus gallus]
Length = 302
Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/62 (70%), Positives = 48/62 (77%), Gaps = 7/62 (11%)
Query: 29 EDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNL 88
ED +A D + K+QRRQRTHFTSQQLQELEATF RNRYPDMS REEIA+WTNL
Sbjct: 65 EDGAADDPAKK-------KKQRRQRTHFTSQQLQELEATFQRNRYPDMSMREEIAVWTNL 117
Query: 89 TE 90
TE
Sbjct: 118 TE 119
>gi|126290051|ref|XP_001365455.1| PREDICTED: pituitary homeobox 1 [Monodelphis domestica]
Length = 306
Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/71 (63%), Positives = 49/71 (69%), Gaps = 7/71 (9%)
Query: 20 ELSNHNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTR 79
E S ED +D + K+QRRQRTHFTSQQLQELEATF RNRYPDMS R
Sbjct: 57 ERSGETKGNEDGGGEDPAKK-------KKQRRQRTHFTSQQLQELEATFQRNRYPDMSMR 109
Query: 80 EEIAMWTNLTE 90
EEIA+WTNLTE
Sbjct: 110 EEIAVWTNLTE 120
>gi|403275548|ref|XP_003929502.1| PREDICTED: pituitary homeobox 2 isoform 2 [Saimiri boliviensis
boliviensis]
gi|403275552|ref|XP_003929504.1| PREDICTED: pituitary homeobox 2 isoform 4 [Saimiri boliviensis
boliviensis]
gi|426231271|ref|XP_004009663.1| PREDICTED: pituitary homeobox 2 isoform 2 [Ovis aries]
Length = 317
Score = 90.1 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 45/67 (67%), Positives = 52/67 (77%)
Query: 25 NDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAM 84
N+ + K+ +++ KRQRRQRTHFTSQQLQELEATF RNRYPDMSTREEIA+
Sbjct: 61 NEKDKSQQGKNEDVGAEDPSKKKRQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAV 120
Query: 85 WTNLTEA 91
WTNLTEA
Sbjct: 121 WTNLTEA 127
>gi|390460514|ref|XP_003732496.1| PREDICTED: pituitary homeobox 2 [Callithrix jacchus]
gi|390460517|ref|XP_003732497.1| PREDICTED: pituitary homeobox 2 [Callithrix jacchus]
Length = 317
Score = 90.1 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 45/67 (67%), Positives = 52/67 (77%)
Query: 25 NDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAM 84
N+ + K+ +++ KRQRRQRTHFTSQQLQELEATF RNRYPDMSTREEIA+
Sbjct: 61 NEKDKSQQGKNEDVGAEDPSKKKRQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAV 120
Query: 85 WTNLTEA 91
WTNLTEA
Sbjct: 121 WTNLTEA 127
>gi|30841039|ref|NP_035228.2| pituitary homeobox 2 isoform b [Mus musculus]
gi|6174908|sp|P97474.2|PITX2_MOUSE RecName: Full=Pituitary homeobox 2; AltName: Full=ALL1-responsive
protein ARP1; AltName: Full=BRX1 homeoprotein; AltName:
Full=Homeobox protein PITX2; AltName:
Full=Orthodenticle-like homeobox 2; AltName:
Full=Paired-like homeodomain transcription factor 2;
AltName: Full=Paired-like homeodomain transcription
factor Munc 30; AltName: Full=Solurshin
gi|1930006|gb|AAC53119.1| pituitary homeobox 2 isoform b [Mus musculus]
gi|148680297|gb|EDL12244.1| paired-like homeodomain transcription factor 2, isoform CRA_a [Mus
musculus]
Length = 317
Score = 89.7 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 45/67 (67%), Positives = 52/67 (77%)
Query: 25 NDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAM 84
N+ + K+ +++ KRQRRQRTHFTSQQLQELEATF RNRYPDMSTREEIA+
Sbjct: 61 NEKDKGQQGKNEDVGAEDPSKKKRQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAV 120
Query: 85 WTNLTEA 91
WTNLTEA
Sbjct: 121 WTNLTEA 127
>gi|296195751|ref|XP_002745524.1| PREDICTED: pituitary homeobox 2 isoform 2 [Callithrix jacchus]
Length = 325
Score = 89.7 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 49/74 (66%), Positives = 54/74 (72%), Gaps = 7/74 (9%)
Query: 25 NDSIEDSSAKDSSSNSKNT-------KNSKRQRRQRTHFTSQQLQELEATFARNRYPDMS 77
+ S +++ KD S KN KRQRRQRTHFTSQQLQELEATF RNRYPDMS
Sbjct: 62 DTSSPEAAEKDKSQQGKNEDVGAEDPSKKKRQRRQRTHFTSQQLQELEATFQRNRYPDMS 121
Query: 78 TREEIAMWTNLTEA 91
TREEIA+WTNLTEA
Sbjct: 122 TREEIAVWTNLTEA 135
>gi|332235072|ref|XP_003266727.1| PREDICTED: pituitary homeobox 1 [Nomascus leucogenys]
Length = 336
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/78 (58%), Positives = 51/78 (65%), Gaps = 6/78 (7%)
Query: 19 TELSNHNDSIEDSSAKDSSSNSK------NTKNSKRQRRQRTHFTSQQLQELEATFARNR 72
TEL E +DS + + K+QRRQRTHFTSQQLQELEATF RNR
Sbjct: 53 TELPEKERGGEPKGPEDSGAGGTGCGGADDPAKKKKQRRQRTHFTSQQLQELEATFQRNR 112
Query: 73 YPDMSTREEIAMWTNLTE 90
YPDMS REEIA+WTNLTE
Sbjct: 113 YPDMSMREEIAVWTNLTE 130
>gi|291401268|ref|XP_002717161.1| PREDICTED: paired-like homeodomain 1 isoform 1 [Oryctolagus
cuniculus]
Length = 317
Score = 89.7 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 45/67 (67%), Positives = 52/67 (77%)
Query: 25 NDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAM 84
N+ + K+ +++ KRQRRQRTHFTSQQLQELEATF RNRYPDMSTREEIA+
Sbjct: 61 NEKDKSQQGKNEDVGAEDPSKKKRQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAV 120
Query: 85 WTNLTEA 91
WTNLTEA
Sbjct: 121 WTNLTEA 127
>gi|354471883|ref|XP_003498170.1| PREDICTED: pituitary homeobox 1-like [Cricetulus griseus]
Length = 293
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/51 (78%), Positives = 45/51 (88%)
Query: 40 SKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTE 90
+++ K+QRRQRTHFTSQQLQELEATF RNRYPDMS REEIA+WTNLTE
Sbjct: 110 AEDPAKKKKQRRQRTHFTSQQLQELEATFQRNRYPDMSMREEIAVWTNLTE 160
>gi|328802693|ref|NP_001192229.1| pituitary homeobox 1 [Bos taurus]
gi|296485327|tpg|DAA27442.1| TPA: paired-like homeodomain 1 [Bos taurus]
Length = 314
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/44 (90%), Positives = 42/44 (95%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTE 90
K+QRRQRTHFTSQQLQELEATF RNRYPDMS REEIA+WTNLTE
Sbjct: 87 KKQRRQRTHFTSQQLQELEATFQRNRYPDMSMREEIAVWTNLTE 130
>gi|417398828|gb|JAA46447.1| Putative transcription factor ptx1 [Desmodus rotundus]
Length = 314
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/44 (90%), Positives = 42/44 (95%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTE 90
K+QRRQRTHFTSQQLQELEATF RNRYPDMS REEIA+WTNLTE
Sbjct: 87 KKQRRQRTHFTSQQLQELEATFQRNRYPDMSMREEIAVWTNLTE 130
>gi|296192770|ref|XP_002744217.1| PREDICTED: pituitary homeobox 1 isoform 2 [Callithrix jacchus]
Length = 314
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/78 (58%), Positives = 53/78 (67%), Gaps = 6/78 (7%)
Query: 19 TELSNHNDSIEDSSAKDSSSN------SKNTKNSKRQRRQRTHFTSQQLQELEATFARNR 72
TEL E +DS + +++ K+QRRQRTHFTSQQLQELEATF RNR
Sbjct: 53 TELPEKERGGEPKGPEDSGTGGTGCGGAEDPAKKKKQRRQRTHFTSQQLQELEATFQRNR 112
Query: 73 YPDMSTREEIAMWTNLTE 90
YPDMS REEIA+WTNLTE
Sbjct: 113 YPDMSMREEIAVWTNLTE 130
>gi|1498310|gb|AAC52716.1| POTX [Mus musculus]
Length = 315
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/44 (90%), Positives = 42/44 (95%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTE 90
K+QRRQRTHFTSQQLQELEATF RNRYPDMS REEIA+WTNLTE
Sbjct: 88 KKQRRQRTHFTSQQLQELEATFQRNRYPDMSMREEIAVWTNLTE 131
>gi|355691618|gb|EHH26803.1| hypothetical protein EGK_16870, partial [Macaca mulatta]
Length = 272
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/44 (90%), Positives = 42/44 (95%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTE 90
K+QRRQRTHFTSQQLQELEATF RNRYPDMS REEIA+WTNLTE
Sbjct: 45 KKQRRQRTHFTSQQLQELEATFQRNRYPDMSMREEIAVWTNLTE 88
>gi|255689726|gb|ACU30146.1| paired-like homeodomain transcription factor 1 [Monodelphis
domestica]
Length = 194
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/71 (63%), Positives = 49/71 (69%), Gaps = 7/71 (9%)
Query: 20 ELSNHNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTR 79
E S ED +D + K+QRRQRTHFTSQQLQELEATF RNRYPDMS R
Sbjct: 1 ERSGETKGNEDGGGEDPAKK-------KKQRRQRTHFTSQQLQELEATFQRNRYPDMSMR 53
Query: 80 EEIAMWTNLTE 90
EEIA+WTNLTE
Sbjct: 54 EEIAVWTNLTE 64
>gi|431892642|gb|ELK03075.1| Pituitary homeobox 1, partial [Pteropus alecto]
Length = 257
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/44 (90%), Positives = 42/44 (95%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTE 90
K+QRRQRTHFTSQQLQELEATF RNRYPDMS REEIA+WTNLTE
Sbjct: 31 KKQRRQRTHFTSQQLQELEATFQRNRYPDMSMREEIAVWTNLTE 74
>gi|355750199|gb|EHH54537.1| hypothetical protein EGM_15398, partial [Macaca fascicularis]
Length = 273
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/44 (90%), Positives = 42/44 (95%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTE 90
K+QRRQRTHFTSQQLQELEATF RNRYPDMS REEIA+WTNLTE
Sbjct: 46 KKQRRQRTHFTSQQLQELEATFQRNRYPDMSMREEIAVWTNLTE 89
>gi|152963644|ref|NP_002644.4| pituitary homeobox 1 [Homo sapiens]
gi|114601770|ref|XP_001168135.1| PREDICTED: pituitary homeobox 1 isoform 1 [Pan troglodytes]
gi|426350020|ref|XP_004042581.1| PREDICTED: pituitary homeobox 1 [Gorilla gorilla gorilla]
gi|108935922|sp|P78337.2|PITX1_HUMAN RecName: Full=Pituitary homeobox 1; AltName:
Full=Hindlimb-expressed homeobox protein backfoot;
AltName: Full=Homeobox protein PITX1; AltName:
Full=Paired-like homeodomain transcription factor 1
gi|2291093|gb|AAB65251.1| paired-like homeodomain transcription factor [Homo sapiens]
gi|14495617|gb|AAH09412.1| Paired-like homeodomain 1 [Homo sapiens]
gi|119582630|gb|EAW62226.1| paired-like homeodomain transcription factor 1, isoform CRA_a [Homo
sapiens]
gi|119582631|gb|EAW62227.1| paired-like homeodomain transcription factor 1, isoform CRA_a [Homo
sapiens]
gi|167773483|gb|ABZ92176.1| paired-like homeodomain 1 [synthetic construct]
gi|208966990|dbj|BAG73509.1| paired-like homeodomain 1 [synthetic construct]
Length = 314
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/44 (90%), Positives = 42/44 (95%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTE 90
K+QRRQRTHFTSQQLQELEATF RNRYPDMS REEIA+WTNLTE
Sbjct: 87 KKQRRQRTHFTSQQLQELEATFQRNRYPDMSMREEIAVWTNLTE 130
>gi|4512222|dbj|BAA75248.1| Brx1b homeoprotein [Mus musculus]
Length = 317
Score = 89.7 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 45/67 (67%), Positives = 52/67 (77%)
Query: 25 NDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAM 84
N+ + K+ +++ KRQRRQRTHFTSQQLQELEATF RNRYPDMSTREEIA+
Sbjct: 61 NEKDKGQQGKNEDVGAEDPSKKKRQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAV 120
Query: 85 WTNLTEA 91
WTNLTEA
Sbjct: 121 WTNLTEA 127
>gi|402870242|ref|XP_003899144.1| PREDICTED: pituitary homeobox 2 isoform 1 [Papio anubis]
gi|402870248|ref|XP_003899147.1| PREDICTED: pituitary homeobox 2 isoform 4 [Papio anubis]
Length = 317
Score = 89.7 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 45/67 (67%), Positives = 52/67 (77%)
Query: 25 NDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAM 84
N+ + K+ +++ KRQRRQRTHFTSQQLQELEATF RNRYPDMSTREEIA+
Sbjct: 61 NEKDKGQQGKNEDVGAEDPSKKKRQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAV 120
Query: 85 WTNLTEA 91
WTNLTEA
Sbjct: 121 WTNLTEA 127
>gi|297676018|ref|XP_002815946.1| PREDICTED: pituitary homeobox 1 [Pongo abelii]
Length = 313
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/44 (90%), Positives = 42/44 (95%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTE 90
K+QRRQRTHFTSQQLQELEATF RNRYPDMS REEIA+WTNLTE
Sbjct: 86 KKQRRQRTHFTSQQLQELEATFQRNRYPDMSMREEIAVWTNLTE 129
>gi|6755070|ref|NP_035227.1| pituitary homeobox 1 [Mus musculus]
gi|6174906|sp|P70314.2|PITX1_MOUSE RecName: Full=Pituitary homeobox 1; AltName:
Full=Hindlimb-expressed homeobox protein backfoot;
AltName: Full=Homeobox protein P-OTX; AltName:
Full=Homeobox protein PITX1; AltName: Full=Paired-like
homeodomain transcription factor 1; AltName:
Full=Pituitary OTX-related factor
gi|1616805|gb|AAB16860.1| Ptx1 [Mus musculus]
gi|15215190|gb|AAH12696.1| Paired-like homeodomain transcription factor 1 [Mus musculus]
gi|74210934|dbj|BAE25071.1| unnamed protein product [Mus musculus]
gi|148709283|gb|EDL41229.1| paired-like homeodomain transcription factor 1, isoform CRA_a [Mus
musculus]
gi|148709284|gb|EDL41230.1| paired-like homeodomain transcription factor 1, isoform CRA_a [Mus
musculus]
Length = 315
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/44 (90%), Positives = 42/44 (95%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTE 90
K+QRRQRTHFTSQQLQELEATF RNRYPDMS REEIA+WTNLTE
Sbjct: 88 KKQRRQRTHFTSQQLQELEATFQRNRYPDMSMREEIAVWTNLTE 131
>gi|13277554|gb|AAH03685.1| PITX1 protein [Homo sapiens]
gi|158254702|dbj|BAF83324.1| unnamed protein product [Homo sapiens]
gi|325463757|gb|ADZ15649.1| paired-like homeodomain 1 [synthetic construct]
Length = 314
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/44 (90%), Positives = 42/44 (95%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTE 90
K+QRRQRTHFTSQQLQELEATF RNRYPDMS REEIA+WTNLTE
Sbjct: 87 KKQRRQRTHFTSQQLQELEATFQRNRYPDMSMREEIAVWTNLTE 130
>gi|1870671|gb|AAC51126.1| hindlimb expressed homeobox protein backfoot [Homo sapiens]
Length = 314
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/44 (90%), Positives = 42/44 (95%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTE 90
K+QRRQRTHFTSQQLQELEATF RNRYPDMS REEIA+WTNLTE
Sbjct: 87 KKQRRQRTHFTSQQLQELEATFQRNRYPDMSMREEIAVWTNLTE 130
>gi|16758428|ref|NP_446076.1| pituitary homeobox 1 [Rattus norvegicus]
gi|18202678|sp|Q99NA7.1|PITX1_RAT RecName: Full=Pituitary homeobox 1; AltName: Full=Homeobox protein
PITX1; AltName: Full=Paired-like homeodomain
transcription factor 1
gi|13699083|dbj|BAB41202.1| Ptx1 homeodomain protein [Rattus norvegicus]
gi|38303999|gb|AAH61966.1| Paired-like homeodomain 1 [Rattus norvegicus]
gi|149039836|gb|EDL93952.1| paired-like homeodomain transcription factor 1, isoform CRA_a
[Rattus norvegicus]
gi|149039837|gb|EDL93953.1| paired-like homeodomain transcription factor 1, isoform CRA_a
[Rattus norvegicus]
Length = 315
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/44 (90%), Positives = 42/44 (95%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTE 90
K+QRRQRTHFTSQQLQELEATF RNRYPDMS REEIA+WTNLTE
Sbjct: 87 KKQRRQRTHFTSQQLQELEATFQRNRYPDMSMREEIAVWTNLTE 130
>gi|6093720|sp|P56673.1|PITX1_CHICK RecName: Full=Pituitary homeobox 1; AltName: Full=Homeobox protein
PITX1; AltName: Full=Paired-like homeodomain
transcription factor 1; AltName: Full=cPTX1
Length = 311
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/44 (90%), Positives = 42/44 (95%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTE 90
K+QRRQRTHFTSQQLQELEATF RNRYPDMS REEIA+WTNLTE
Sbjct: 86 KKQRRQRTHFTSQQLQELEATFQRNRYPDMSMREEIAVWTNLTE 129
>gi|73970768|ref|XP_850773.1| PREDICTED: pituitary homeobox 1 isoform 3 [Canis lupus familiaris]
Length = 313
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/44 (90%), Positives = 42/44 (95%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTE 90
K+QRRQRTHFTSQQLQELEATF RNRYPDMS REEIA+WTNLTE
Sbjct: 86 KKQRRQRTHFTSQQLQELEATFQRNRYPDMSMREEIAVWTNLTE 129
>gi|395817540|ref|XP_003782227.1| PREDICTED: pituitary homeobox 1 [Otolemur garnettii]
Length = 314
Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/78 (58%), Positives = 52/78 (66%), Gaps = 6/78 (7%)
Query: 19 TELSNHNDSIEDSSAKDSSSNS------KNTKNSKRQRRQRTHFTSQQLQELEATFARNR 72
TEL E +DS + ++ K+QRRQRTHFTSQQLQELEATF RNR
Sbjct: 53 TELPEKERGAEPKGPEDSGAGGAGCGGAEDPAKKKKQRRQRTHFTSQQLQELEATFQRNR 112
Query: 73 YPDMSTREEIAMWTNLTE 90
YPDMS REEIA+WTNLTE
Sbjct: 113 YPDMSMREEIAVWTNLTE 130
>gi|395851310|ref|XP_003798205.1| PREDICTED: pituitary homeobox 2 isoform 3 [Otolemur garnettii]
Length = 317
Score = 89.4 bits (220), Expect = 2e-16, Method: Composition-based stats.
Identities = 45/67 (67%), Positives = 52/67 (77%)
Query: 25 NDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAM 84
N+ + K+ +++ KRQRRQRTHFTSQQLQELEATF RNRYPDMSTREEIA+
Sbjct: 61 NEKEKSQQGKNEDVGAEDPSKKKRQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAV 120
Query: 85 WTNLTEA 91
WTNLTEA
Sbjct: 121 WTNLTEA 127
>gi|348575063|ref|XP_003473309.1| PREDICTED: pituitary homeobox 1-like [Cavia porcellus]
Length = 309
Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/44 (90%), Positives = 42/44 (95%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTE 90
K+QRRQRTHFTSQQLQELEATF RNRYPDMS REEIA+WTNLTE
Sbjct: 82 KKQRRQRTHFTSQQLQELEATFQRNRYPDMSMREEIAVWTNLTE 125
>gi|109078669|ref|XP_001110089.1| PREDICTED: pituitary homeobox 1 isoform 1 [Macaca mulatta]
gi|297295105|ref|XP_002804564.1| PREDICTED: pituitary homeobox 1 [Macaca mulatta]
gi|402872535|ref|XP_003900165.1| PREDICTED: pituitary homeobox 1 [Papio anubis]
Length = 314
Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/44 (90%), Positives = 42/44 (95%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTE 90
K+QRRQRTHFTSQQLQELEATF RNRYPDMS REEIA+WTNLTE
Sbjct: 87 KKQRRQRTHFTSQQLQELEATFQRNRYPDMSMREEIAVWTNLTE 130
>gi|397518446|ref|XP_003829398.1| PREDICTED: pituitary homeobox 1 [Pan paniscus]
Length = 351
Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/44 (90%), Positives = 42/44 (95%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTE 90
K+QRRQRTHFTSQQLQELEATF RNRYPDMS REEIA+WTNLTE
Sbjct: 124 KKQRRQRTHFTSQQLQELEATFQRNRYPDMSMREEIAVWTNLTE 167
>gi|109948275|ref|NP_001035967.1| pituitary homeobox 2 isoform c [Mus musculus]
gi|3078015|gb|AAC40087.1| ALL1 responsive protein ARP1c [Mus musculus]
gi|49522682|gb|AAH75660.1| Paired-like homeodomain transcription factor 2 [Mus musculus]
gi|148680299|gb|EDL12246.1| paired-like homeodomain transcription factor 2, isoform CRA_c [Mus
musculus]
Length = 324
Score = 89.4 bits (220), Expect = 3e-16, Method: Composition-based stats.
Identities = 44/59 (74%), Positives = 49/59 (83%)
Query: 33 AKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
K+ +++ KRQRRQRTHFTSQQLQELEATF RNRYPDMSTREEIA+WTNLTEA
Sbjct: 76 GKNEDVGAEDPSKKKRQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTNLTEA 134
>gi|194219914|ref|XP_001502776.2| PREDICTED: LOW QUALITY PROTEIN: pituitary homeobox 1-like [Equus
caballus]
Length = 290
Score = 89.4 bits (220), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 40/44 (90%), Positives = 42/44 (95%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTE 90
K+QRRQRTHFTSQQLQELEATF RNRYPDMS REEIA+WTNLTE
Sbjct: 63 KKQRRQRTHFTSQQLQELEATFQRNRYPDMSMREEIAVWTNLTE 106
>gi|109948271|ref|NP_001035970.1| pituitary homeobox 2 isoform 1 [Rattus norvegicus]
gi|17380159|sp|Q9R0W1.1|PITX2_RAT RecName: Full=Pituitary homeobox 2; AltName: Full=Homeobox protein
PITX2; AltName: Full=Paired-like homeodomain
transcription factor 2; AltName: Full=rPtx2
gi|5706494|emb|CAB52283.1| homeodomain protein Ptx2A [Rattus norvegicus]
gi|149025927|gb|EDL82170.1| paired-like homeodomain transcription factor 2, isoform CRA_c
[Rattus norvegicus]
Length = 324
Score = 89.0 bits (219), Expect = 3e-16, Method: Composition-based stats.
Identities = 44/59 (74%), Positives = 49/59 (83%)
Query: 33 AKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
K+ +++ KRQRRQRTHFTSQQLQELEATF RNRYPDMSTREEIA+WTNLTEA
Sbjct: 76 GKNEDVGAEDPSKKKRQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTNLTEA 134
>gi|351708465|gb|EHB11384.1| Pituitary homeobox 1, partial [Heterocephalus glaber]
Length = 288
Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 40/44 (90%), Positives = 42/44 (95%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTE 90
K+QRRQRTHFTSQQLQELEATF RNRYPDMS REEIA+WTNLTE
Sbjct: 65 KKQRRQRTHFTSQQLQELEATFQRNRYPDMSMREEIAVWTNLTE 108
>gi|109075376|ref|XP_001091288.1| PREDICTED: pituitary homeobox 2-like isoform 4 [Macaca mulatta]
gi|402870246|ref|XP_003899146.1| PREDICTED: pituitary homeobox 2 isoform 3 [Papio anubis]
gi|355687543|gb|EHH26127.1| hypothetical protein EGK_16019 [Macaca mulatta]
Length = 325
Score = 89.0 bits (219), Expect = 3e-16, Method: Composition-based stats.
Identities = 44/59 (74%), Positives = 49/59 (83%)
Query: 33 AKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
K+ +++ KRQRRQRTHFTSQQLQELEATF RNRYPDMSTREEIA+WTNLTEA
Sbjct: 77 GKNEDVGAEDPSKKKRQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTNLTEA 135
>gi|4512220|dbj|BAA75247.1| Brx1a homeoprotein [Mus musculus]
Length = 324
Score = 89.0 bits (219), Expect = 3e-16, Method: Composition-based stats.
Identities = 44/59 (74%), Positives = 49/59 (83%)
Query: 33 AKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
K+ +++ KRQRRQRTHFTSQQLQELEATF RNRYPDMSTREEIA+WTNLTEA
Sbjct: 76 GKNEDVGAEDPSKKKRQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTNLTEA 134
>gi|358339162|dbj|GAA47277.1| pituitary homeobox 1 [Clonorchis sinensis]
Length = 848
Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/52 (80%), Positives = 47/52 (90%), Gaps = 1/52 (1%)
Query: 40 SKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
S+ T N KRQRRQRTHFTSQQLQELEATFARNRYPDM+ REEIA WT+L+E+
Sbjct: 162 SRGTAN-KRQRRQRTHFTSQQLQELEATFARNRYPDMNLREEIATWTDLSES 212
>gi|354491918|ref|XP_003508100.1| PREDICTED: pituitary homeobox 3-like [Cricetulus griseus]
Length = 186
Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/66 (66%), Positives = 51/66 (77%), Gaps = 1/66 (1%)
Query: 24 HNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIA 83
H+DS E +SA + ++ K+QRRQ HFTSQQLQELEATF RNRYPDMSTREEIA
Sbjct: 60 HSDS-EKASASLPGGSPEDGSLKKKQRRQSKHFTSQQLQELEATFQRNRYPDMSTREEIA 118
Query: 84 MWTNLT 89
+WTNLT
Sbjct: 119 VWTNLT 124
>gi|360045399|emb|CCD82947.1| pituitary homeobox protein-related [Schistosoma mansoni]
Length = 818
Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/84 (57%), Positives = 61/84 (72%), Gaps = 4/84 (4%)
Query: 11 EPLIGNIKTELSNHNDSIEDSSAKDSSSNSKNT---KNSKRQRRQRTHFTSQQLQELEAT 67
+P I N + ++ D + DS+ +S +N K + + +KRQRRQRTHFTSQQLQELEAT
Sbjct: 33 QPTIKNFNDHIKSNFD-MYDSNMNNSLTNKKYSCRPQFNKRQRRQRTHFTSQQLQELEAT 91
Query: 68 FARNRYPDMSTREEIAMWTNLTEA 91
FARNRYPDM+ REEIA WT L+E
Sbjct: 92 FARNRYPDMNLREEIATWTELSEG 115
>gi|440910451|gb|ELR60247.1| Pituitary homeobox 1, partial [Bos grunniens mutus]
Length = 228
Score = 89.0 bits (219), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 40/44 (90%), Positives = 42/44 (95%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTE 90
K+QRRQRTHFTSQQLQELEATF RNRYPDMS REEIA+WTNLTE
Sbjct: 59 KKQRRQRTHFTSQQLQELEATFQRNRYPDMSMREEIAVWTNLTE 102
>gi|344265522|ref|XP_003404833.1| PREDICTED: pituitary homeobox 1-like [Loxodonta africana]
Length = 292
Score = 89.0 bits (219), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 40/44 (90%), Positives = 42/44 (95%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTE 90
K+QRRQRTHFTSQQLQELEATF RNRYPDMS REEIA+WTNLTE
Sbjct: 87 KKQRRQRTHFTSQQLQELEATFQRNRYPDMSMREEIAVWTNLTE 130
>gi|7271777|gb|AAF44618.1|AF201091_1 paired-like homeodomain transcription factor Munc 30, partial [Mus
musculus]
Length = 314
Score = 88.6 bits (218), Expect = 4e-16, Method: Composition-based stats.
Identities = 44/59 (74%), Positives = 49/59 (83%)
Query: 33 AKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
K+ +++ KRQRRQRTHFTSQQLQELEATF RNRYPDMSTREEIA+WTNLTEA
Sbjct: 66 GKNEDVGAEDPSKKKRQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTNLTEA 124
>gi|74002160|ref|XP_863661.1| PREDICTED: pituitary homeobox 2 isoform 3 [Canis lupus familiaris]
gi|301764280|ref|XP_002917558.1| PREDICTED: pituitary homeobox 2-like isoform 1 [Ailuropoda
melanoleuca]
gi|345795854|ref|XP_003434086.1| PREDICTED: pituitary homeobox 2 [Canis lupus familiaris]
Length = 317
Score = 88.6 bits (218), Expect = 4e-16, Method: Composition-based stats.
Identities = 44/63 (69%), Positives = 50/63 (79%)
Query: 29 EDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNL 88
+ K+ +++ KRQRRQRTHFTSQQLQELEATF RNRYPDMSTREEIA+WTNL
Sbjct: 65 KSQQGKNEDVGTEDPSKKKRQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTNL 124
Query: 89 TEA 91
TEA
Sbjct: 125 TEA 127
>gi|410957007|ref|XP_003985126.1| PREDICTED: pituitary homeobox 2 isoform 3 [Felis catus]
Length = 317
Score = 88.6 bits (218), Expect = 4e-16, Method: Composition-based stats.
Identities = 48/68 (70%), Positives = 51/68 (75%), Gaps = 7/68 (10%)
Query: 31 SSAKDSSSNSKNT-------KNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIA 83
++ KD S KN KRQRRQRTHFTSQQLQELEATF RNRYPDMSTREEIA
Sbjct: 60 ATEKDKSQQGKNEDVGPEDPSKKKRQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIA 119
Query: 84 MWTNLTEA 91
+WTNLTEA
Sbjct: 120 VWTNLTEA 127
>gi|256085144|ref|XP_002578783.1| pituitary homeobox protein-related [Schistosoma mansoni]
Length = 144
Score = 88.2 bits (217), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 48/84 (57%), Positives = 61/84 (72%), Gaps = 4/84 (4%)
Query: 11 EPLIGNIKTELSNHNDSIEDSSAKDSSSNSKNT---KNSKRQRRQRTHFTSQQLQELEAT 67
+P I N + ++ D + DS+ +S +N K + + +KRQRRQRTHFTSQQLQELEAT
Sbjct: 33 QPTIKNFNDHIKSNFD-MYDSNMNNSLTNKKYSCRPQFNKRQRRQRTHFTSQQLQELEAT 91
Query: 68 FARNRYPDMSTREEIAMWTNLTEA 91
FARNRYPDM+ REEIA WT L+E
Sbjct: 92 FARNRYPDMNLREEIATWTELSEG 115
>gi|361129607|pdb|2L7F|P Chain P, Solution Structure Of The Pitx2 Homeodomain
gi|385867194|pdb|2LKX|A Chain A, Nmr Structure Of The Homeodomain Of Pitx2 In Complex
With A Taatcc Dna Binding Site
Length = 68
Score = 88.2 bits (217), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 41/43 (95%), Positives = 42/43 (97%)
Query: 49 QRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
QRRQRTHFTSQQLQELEATF RNRYPDMSTREEIA+WTNLTEA
Sbjct: 3 QRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTNLTEA 45
>gi|410948419|ref|XP_003980937.1| PREDICTED: uncharacterized protein LOC101087195 [Felis catus]
Length = 895
Score = 87.8 bits (216), Expect = 7e-16, Method: Composition-based stats.
Identities = 47/74 (63%), Positives = 52/74 (70%), Gaps = 1/74 (1%)
Query: 18 KTELSNHNDSIEDSSAKDSSSNS-KNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDM 76
K E S EDS A + ++ K+QRRQRTHFTSQQLQELEATF RNRYPDM
Sbjct: 653 KKERSGEVKGPEDSGAGGAGCGGAEDPAKKKKQRRQRTHFTSQQLQELEATFQRNRYPDM 712
Query: 77 STREEIAMWTNLTE 90
S REEIA+WTNLTE
Sbjct: 713 SMREEIAVWTNLTE 726
>gi|410957005|ref|XP_003985125.1| PREDICTED: pituitary homeobox 2 isoform 2 [Felis catus]
Length = 332
Score = 87.4 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 48/68 (70%), Positives = 51/68 (75%), Gaps = 7/68 (10%)
Query: 31 SSAKDSSSNSKNT-------KNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIA 83
++ KD S KN KRQRRQRTHFTSQQLQELEATF RNRYPDMSTREEIA
Sbjct: 75 ATEKDKSQQGKNEDVGPEDPSKKKRQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIA 134
Query: 84 MWTNLTEA 91
+WTNLTEA
Sbjct: 135 VWTNLTEA 142
>gi|345792473|ref|XP_543986.3| PREDICTED: LOW QUALITY PROTEIN: pituitary homeobox 3 [Canis lupus
familiaris]
Length = 408
Score = 86.7 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 40/45 (88%), Positives = 42/45 (93%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
K+QR QRTHFTSQQLQELEA F RNRYPDMSTREEIA+WTNLTEA
Sbjct: 166 KKQRGQRTHFTSQQLQELEAPFQRNRYPDMSTREEIAVWTNLTEA 210
>gi|443696883|gb|ELT97498.1| hypothetical protein CAPTEDRAFT_171001 [Capitella teleta]
Length = 351
Score = 85.9 bits (211), Expect = 3e-15, Method: Composition-based stats.
Identities = 40/46 (86%), Positives = 43/46 (93%)
Query: 45 NSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTE 90
+ KRQRRQRTHFTSQQLQELEATF RNRYPDM+TREEI+ WTNLTE
Sbjct: 120 DGKRQRRQRTHFTSQQLQELEATFQRNRYPDMATREEISAWTNLTE 165
>gi|380021634|ref|XP_003694665.1| PREDICTED: uncharacterized protein LOC100868419 [Apis florea]
Length = 619
Score = 85.9 bits (211), Expect = 3e-15, Method: Composition-based stats.
Identities = 40/55 (72%), Positives = 47/55 (85%)
Query: 36 SSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTE 90
+S++ K+ K +KRQRRQRTHFTSQQLQELEA F RNRYPDMSTREEI ++T L E
Sbjct: 157 NSADDKDGKKNKRQRRQRTHFTSQQLQELEALFMRNRYPDMSTREEIGLFTKLPE 211
>gi|307166789|gb|EFN60751.1| Pituitary homeobox 3 [Camponotus floridanus]
Length = 186
Score = 85.5 bits (210), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/75 (57%), Positives = 50/75 (66%)
Query: 17 IKTELSNHNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDM 76
+K EL + + ++ K+ K +KRQRRQRTHFT QLQ LE TF RNRYPDM
Sbjct: 83 VKHELGAGGGVVSPGVVGVNDTDDKDGKKNKRQRRQRTHFTQHQLQNLEMTFMRNRYPDM 142
Query: 77 STREEIAMWTNLTEA 91
STREEIA TNLTEA
Sbjct: 143 STREEIACCTNLTEA 157
>gi|361129610|pdb|2L7M|P Chain P, Solution Structure Of The Pitx2 Homeodomain R24h Mutant
Length = 68
Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 40/43 (93%), Positives = 41/43 (95%)
Query: 49 QRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
QRRQRTHFTSQQLQELEATF RN YPDMSTREEIA+WTNLTEA
Sbjct: 3 QRRQRTHFTSQQLQELEATFQRNHYPDMSTREEIAVWTNLTEA 45
>gi|332021210|gb|EGI61595.1| Pituitary homeobox 2 [Acromyrmex echinatior]
Length = 167
Score = 85.1 bits (209), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 43/75 (57%), Positives = 50/75 (66%)
Query: 17 IKTELSNHNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDM 76
+K EL + + ++ K+ K +KRQRRQRTHFT QLQ LE TF RNRYPDM
Sbjct: 77 VKHELGAAGGVVSPGVVGVNDTDDKDGKKNKRQRRQRTHFTQHQLQNLEMTFLRNRYPDM 136
Query: 77 STREEIAMWTNLTEA 91
STREEIA TNLTEA
Sbjct: 137 STREEIACCTNLTEA 151
>gi|242046474|ref|XP_002399443.1| transcription factor DRG11, putative [Ixodes scapularis]
gi|215497543|gb|EEC07037.1| transcription factor DRG11, putative [Ixodes scapularis]
Length = 121
Score = 84.7 bits (208), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 38/38 (100%), Positives = 38/38 (100%)
Query: 54 THFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
THFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA
Sbjct: 29 THFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 66
>gi|196166483|gb|ACG70800.1| Pitx [Convolutriloba longifissura]
Length = 600
Score = 84.3 bits (207), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 46/76 (60%), Positives = 55/76 (72%), Gaps = 1/76 (1%)
Query: 16 NIKTELSNHNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPD 75
NIKT +NH+ + + D+ + K +KR RRQRTHFTSQQLQELE FARNRYPD
Sbjct: 351 NIKTS-ANHSPADNVMNNDDAIDDDDEDKKNKRTRRQRTHFTSQQLQELETLFARNRYPD 409
Query: 76 MSTREEIAMWTNLTEA 91
M+TREEI+ WTNL EA
Sbjct: 410 MATREEISAWTNLPEA 425
>gi|268552535|ref|XP_002634250.1| C. briggsae CBR-UNC-30 protein [Caenorhabditis briggsae]
Length = 327
Score = 84.0 bits (206), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 43/71 (60%), Positives = 51/71 (71%), Gaps = 3/71 (4%)
Query: 24 HNDSI--EDSSAKDSSSN-SKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTRE 80
H D+I E +S DSS N S N +++ RRQRTHFTS QL ELE FARNRYPDM+ RE
Sbjct: 87 HEDAIHNESASPADSSGNGSTNGGKAQKPRRQRTHFTSHQLTELENWFARNRYPDMACRE 146
Query: 81 EIAMWTNLTEA 91
EIA+W +LTE
Sbjct: 147 EIAVWISLTEP 157
>gi|22531355|emb|CAD30207.1| paired superclass homeobox transcription factor [Lampetra
planeri]
Length = 196
Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/40 (95%), Positives = 39/40 (97%)
Query: 52 QRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
QRTHFTSQQLQELEATF RNRYPDMSTREEIA+WTNLTEA
Sbjct: 1 QRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTNLTEA 40
>gi|57545777|gb|AAW51825.1| PITX2 [Paracentrotus lividus]
Length = 318
Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 37/44 (84%), Positives = 40/44 (90%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTE 90
KR RRQRTHFTSQQLQELEA F+RNRYPD+STREEI+ W NLTE
Sbjct: 86 KRTRRQRTHFTSQQLQELEANFSRNRYPDLSTREEISAWCNLTE 129
>gi|72008575|ref|XP_782344.1| PREDICTED: pituitary homeobox x-like [Strongylocentrotus
purpuratus]
Length = 314
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/44 (84%), Positives = 39/44 (88%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTE 90
KR RRQRTHFTSQQLQELEA F+RNRYPD+STREEI W NLTE
Sbjct: 82 KRTRRQRTHFTSQQLQELEANFSRNRYPDLSTREEICAWCNLTE 125
>gi|339237045|ref|XP_003380077.1| pituitary homeobox 1 [Trichinella spiralis]
gi|316977159|gb|EFV60307.1| pituitary homeobox 1 [Trichinella spiralis]
Length = 389
Score = 82.8 bits (203), Expect = 3e-14, Method: Composition-based stats.
Identities = 38/54 (70%), Positives = 47/54 (87%)
Query: 37 SSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTE 90
++N + + S +QRRQRTHFTSQQLQELE+ FARNRYPDM+ REEIA+WT+LTE
Sbjct: 136 TNNRDDRETSGKQRRQRTHFTSQQLQELESVFARNRYPDMAAREEIALWTSLTE 189
>gi|444517223|gb|ELV11418.1| Pituitary homeobox 1 [Tupaia chinensis]
Length = 319
Score = 80.9 bits (198), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 36/39 (92%), Positives = 37/39 (94%)
Query: 52 QRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTE 90
QRTHFTSQQLQELEATF RNRYPDMS REEIA+WTNLTE
Sbjct: 97 QRTHFTSQQLQELEATFQRNRYPDMSMREEIAVWTNLTE 135
>gi|405962541|gb|EKC28207.1| Pituitary homeobox 2 [Crassostrea gigas]
Length = 312
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/38 (94%), Positives = 37/38 (97%)
Query: 54 THFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
THFTSQQLQELEATFARNRYPDM+TREEIA WTNLTEA
Sbjct: 97 THFTSQQLQELEATFARNRYPDMATREEIAAWTNLTEA 134
>gi|70570922|dbj|BAE06646.1| transcription factor protein [Ciona intestinalis]
Length = 468
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/64 (67%), Positives = 52/64 (81%), Gaps = 1/64 (1%)
Query: 29 EDSSAKDSSSNSKNTKNSKRQRRQR-THFTSQQLQELEATFARNRYPDMSTREEIAMWTN 87
E SS ++ S+ + SKR++R++ THFTSQQLQELEA FARNRYPDMSTREEI+ WTN
Sbjct: 232 EKSSPGNACSDDADGDKSKRRQRRQRTHFTSQQLQELEALFARNRYPDMSTREEISAWTN 291
Query: 88 LTEA 91
LTEA
Sbjct: 292 LTEA 295
>gi|196010828|ref|XP_002115278.1| hypothetical protein TRIADDRAFT_17913 [Trichoplax adhaerens]
gi|190582049|gb|EDV22123.1| hypothetical protein TRIADDRAFT_17913 [Trichoplax adhaerens]
Length = 70
Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/46 (80%), Positives = 40/46 (86%)
Query: 46 SKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
+R RRQRTHFTS QLQELEA FARNRYPDM+TREEIAMW NL E+
Sbjct: 7 KRRPRRQRTHFTSYQLQELEAAFARNRYPDMTTREEIAMWINLNES 52
>gi|209947387|gb|ACI97435.1| paired superclass homeobox transcription factor Pitx [Biomphalaria
glabrata]
Length = 163
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/38 (92%), Positives = 37/38 (97%)
Query: 54 THFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
THFTSQQLQELEATFARNRYPDM+TREEI+ WTNLTEA
Sbjct: 122 THFTSQQLQELEATFARNRYPDMATREEISAWTNLTEA 159
>gi|23094260|emb|CAD27490.1| paired superclass homeobox transcription factor [Ciona
intestinalis]
Length = 374
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/64 (67%), Positives = 52/64 (81%), Gaps = 1/64 (1%)
Query: 29 EDSSAKDSSSNSKNTKNSKRQRRQR-THFTSQQLQELEATFARNRYPDMSTREEIAMWTN 87
E SS ++ S+ + SKR++R++ THFTSQQLQELEA FARNRYPDMSTREEI+ WTN
Sbjct: 138 EKSSPGNACSDDADGDKSKRRQRRQRTHFTSQQLQELEALFARNRYPDMSTREEISAWTN 197
Query: 88 LTEA 91
LTEA
Sbjct: 198 LTEA 201
>gi|74096013|ref|NP_001027689.1| paired superclass homeobox transcription factor [Ciona
intestinalis]
gi|53801353|gb|AAU93886.1| pituitary homeobox pitx isoform a/b [Ciona intestinalis]
Length = 466
Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/64 (67%), Positives = 52/64 (81%), Gaps = 1/64 (1%)
Query: 29 EDSSAKDSSSNSKNTKNSKRQRRQR-THFTSQQLQELEATFARNRYPDMSTREEIAMWTN 87
E SS ++ S+ + SKR++R++ THFTSQQLQELEA FARNRYPDMSTREEI+ WTN
Sbjct: 230 EKSSPGNACSDDADGDKSKRRQRRQRTHFTSQQLQELEALFARNRYPDMSTREEISAWTN 289
Query: 88 LTEA 91
LTEA
Sbjct: 290 LTEA 293
>gi|190608786|gb|ACE79724.1| paired superclass homeobox transcription factor [Branchiostoma
lanceolatum]
Length = 147
Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 34/37 (91%), Positives = 36/37 (97%)
Query: 54 THFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTE 90
THFTSQQLQELEA+FARNRYPDM+TREEIA WTNLTE
Sbjct: 111 THFTSQQLQELEASFARNRYPDMATREEIAAWTNLTE 147
>gi|269974864|gb|ACZ55229.1| paired superclass homeobox transcription factor Pitx [Lymnaea
stagnalis]
Length = 330
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/38 (92%), Positives = 37/38 (97%)
Query: 54 THFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
THFTSQQLQELEATFARNRYPDM+TREEI+ WTNLTEA
Sbjct: 109 THFTSQQLQELEATFARNRYPDMATREEISAWTNLTEA 146
>gi|197281988|gb|ACH57173.1| Pitx [Trichoplax adhaerens]
Length = 60
Score = 78.6 bits (192), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 36/42 (85%), Positives = 38/42 (90%)
Query: 50 RRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
RRQRTHFTS QLQELEA FARNRYPDM+TREEIAMW NL E+
Sbjct: 2 RRQRTHFTSYQLQELEAAFARNRYPDMTTREEIAMWINLNES 43
>gi|426231015|ref|XP_004009547.1| PREDICTED: uncharacterized protein LOC101119560 [Ovis aries]
Length = 597
Score = 77.8 bits (190), Expect = 7e-13, Method: Composition-based stats.
Identities = 36/43 (83%), Positives = 38/43 (88%)
Query: 48 RQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTE 90
R RR RT +TSQQLQELEATF RNRYPDMS REEIA+WTNLTE
Sbjct: 370 RLRRHRTDYTSQQLQELEATFQRNRYPDMSMREEIAVWTNLTE 412
>gi|115665186|ref|XP_787549.2| PREDICTED: pituitary homeobox x-like [Strongylocentrotus
purpuratus]
gi|84095078|dbj|BAE66654.1| paired superclass homeobox transcription factor HpPitx
[Hemicentrotus pulcherrimus]
Length = 303
Score = 77.8 bits (190), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 35/37 (94%), Positives = 35/37 (94%)
Query: 54 THFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTE 90
THFTSQQLQELEA FARNRYPDMSTREEIA WTNLTE
Sbjct: 82 THFTSQQLQELEANFARNRYPDMSTREEIAAWTNLTE 118
>gi|71006814|dbj|BAE07208.1| Pitx homolog [Asterina pectinifera]
Length = 328
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/38 (89%), Positives = 35/38 (92%)
Query: 54 THFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
THFTSQQLQELE FARNRYPDMSTREEIA WTNLTE+
Sbjct: 113 THFTSQQLQELEGNFARNRYPDMSTREEIAAWTNLTES 150
>gi|1078867|pir||S52424 homeodomain protein unc-30 - Caenorhabditis elegans
Length = 318
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/69 (59%), Positives = 49/69 (71%), Gaps = 4/69 (5%)
Query: 23 NHNDSIEDSSAKDSSSN-SKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREE 81
NH D+ SS DS+ N S N ++ RRQRTHFTS QL ELE F+RNRYPDM+ REE
Sbjct: 87 NHLDT---SSPTDSTGNGSTNGGKIQKPRRQRTHFTSHQLTELENWFSRNRYPDMACREE 143
Query: 82 IAMWTNLTE 90
IA+W +LTE
Sbjct: 144 IAVWISLTE 152
>gi|71981643|ref|NP_001021276.1| Protein UNC-30, isoform a [Caenorhabditis elegans]
gi|3873829|emb|CAA97770.1| Protein UNC-30, isoform a [Caenorhabditis elegans]
Length = 319
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/67 (56%), Positives = 49/67 (73%), Gaps = 1/67 (1%)
Query: 25 NDSIEDSSAKDSSSN-SKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIA 83
++ ++ SS DS+ N S N ++ RRQRTHFTS QL ELE F+RNRYPDM+ REEIA
Sbjct: 87 DNHLDTSSPTDSTGNGSTNGGKIQKPRRQRTHFTSHQLTELENWFSRNRYPDMACREEIA 146
Query: 84 MWTNLTE 90
+W +LTE
Sbjct: 147 VWISLTE 153
>gi|642080|gb|AAA63155.1| homeodomain protein [Caenorhabditis elegans]
gi|1092824|prf||2101290A UNC-30 protein
Length = 319
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/64 (59%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Query: 28 IEDSSAKDSSSN-SKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWT 86
++ SS DS+ N S N ++ RRQRTHFTS QL ELE F+RNRYPDM+ REEIA+W
Sbjct: 90 LDTSSPTDSTGNGSTNGGKIQKPRRQRTHFTSHQLTELENWFSRNRYPDMACREEIAVWI 149
Query: 87 NLTE 90
+LTE
Sbjct: 150 SLTE 153
>gi|71981647|ref|NP_001021277.1| Protein UNC-30, isoform b [Caenorhabditis elegans]
gi|114152903|sp|P52906.2|UNC30_CAEEL RecName: Full=Homeobox protein unc-30; AltName: Full=Uncoordinated
protein 30
gi|38422260|emb|CAE54882.1| Protein UNC-30, isoform b [Caenorhabditis elegans]
Length = 323
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/67 (56%), Positives = 49/67 (73%), Gaps = 1/67 (1%)
Query: 25 NDSIEDSSAKDSSSN-SKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIA 83
++ ++ SS DS+ N S N ++ RRQRTHFTS QL ELE F+RNRYPDM+ REEIA
Sbjct: 87 DNHLDTSSPTDSTGNGSTNGGKIQKPRRQRTHFTSHQLTELENWFSRNRYPDMACREEIA 146
Query: 84 MWTNLTE 90
+W +LTE
Sbjct: 147 VWISLTE 153
>gi|156408131|ref|XP_001641710.1| predicted protein [Nematostella vectensis]
gi|156228850|gb|EDO49647.1| predicted protein [Nematostella vectensis]
Length = 68
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/47 (74%), Positives = 40/47 (85%)
Query: 45 NSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRRQRTHFTS QLQ+LE TF RNRYPDM REEIA++TNLTEA
Sbjct: 4 KKRKQRRQRTHFTSFQLQQLEGTFGRNRYPDMQMREEIALYTNLTEA 50
>gi|390354222|ref|XP_797336.3| PREDICTED: pituitary homeobox 3-like [Strongylocentrotus
purpuratus]
Length = 433
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/69 (65%), Positives = 49/69 (71%), Gaps = 2/69 (2%)
Query: 22 SNHNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREE 81
N S D A D ++ +RQRRQRTHFTSQQLQELEA FARNRYPDMSTREE
Sbjct: 172 GNCEKSCNDPDADDG--GDQDNGKKRRQRRQRTHFTSQQLQELEANFARNRYPDMSTREE 229
Query: 82 IAMWTNLTE 90
IA WT+LTE
Sbjct: 230 IAAWTSLTE 238
>gi|312066537|ref|XP_003136317.1| hypothetical protein LOAG_00729 [Loa loa]
gi|307768512|gb|EFO27746.1| hypothetical protein LOAG_00729 [Loa loa]
Length = 236
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/70 (55%), Positives = 49/70 (70%), Gaps = 5/70 (7%)
Query: 26 DSIEDSSAKDSSSNSKNTKN-----SKRQRRQRTHFTSQQLQELEATFARNRYPDMSTRE 80
D E S + + NS + + S++ RRQRTHFTSQQL ELE F+RNRYPDM+TRE
Sbjct: 5 DYDESSGSIECDGNSNASPDTCLISSQKPRRQRTHFTSQQLTELENWFSRNRYPDMATRE 64
Query: 81 EIAMWTNLTE 90
EIA+W +LTE
Sbjct: 65 EIALWISLTE 74
>gi|258503931|gb|ACV72695.1| UNC-30 [Caenorhabditis remanei]
Length = 293
Score = 75.5 bits (184), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/85 (55%), Positives = 57/85 (67%), Gaps = 4/85 (4%)
Query: 8 LPIEPLIG-NIKTELSN-HNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELE 65
LP LI ++K E S+ HNDS S A S + S + ++ RRQRTHFTS QL ELE
Sbjct: 58 LPKLELISLDVKQEHSDDHNDST--SPADSSGNGSTSGGKIQKPRRQRTHFTSHQLTELE 115
Query: 66 ATFARNRYPDMSTREEIAMWTNLTE 90
FARNRYPDM+ REEIA+W +LTE
Sbjct: 116 NWFARNRYPDMACREEIAVWISLTE 140
>gi|308492333|ref|XP_003108357.1| CRE-UNC-30 protein [Caenorhabditis remanei]
gi|308249205|gb|EFO93157.1| CRE-UNC-30 protein [Caenorhabditis remanei]
Length = 326
Score = 75.5 bits (184), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/85 (55%), Positives = 57/85 (67%), Gaps = 4/85 (4%)
Query: 8 LPIEPLIG-NIKTELSN-HNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELE 65
LP LI ++K E S+ HNDS S A S + S + ++ RRQRTHFTS QL ELE
Sbjct: 72 LPKLELISLDVKQEHSDDHNDST--SPADSSGNGSTSGGKIQKPRRQRTHFTSHQLTELE 129
Query: 66 ATFARNRYPDMSTREEIAMWTNLTE 90
FARNRYPDM+ REEIA+W +LTE
Sbjct: 130 NWFARNRYPDMACREEIAVWISLTE 154
>gi|258503941|gb|ACV72700.1| UNC-30 [Caenorhabditis remanei]
Length = 293
Score = 75.5 bits (184), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/85 (55%), Positives = 57/85 (67%), Gaps = 4/85 (4%)
Query: 8 LPIEPLIG-NIKTELSN-HNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELE 65
LP LI ++K E S+ HNDS S A S + S + ++ RRQRTHFTS QL ELE
Sbjct: 58 LPKLELISLDVKQEHSDDHNDST--SPADSSGNGSTSGGKIQKPRRQRTHFTSHQLTELE 115
Query: 66 ATFARNRYPDMSTREEIAMWTNLTE 90
FARNRYPDM+ REEIA+W +LTE
Sbjct: 116 NWFARNRYPDMACREEIAVWISLTE 140
>gi|258503947|gb|ACV72703.1| UNC-30 [Caenorhabditis remanei]
Length = 293
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/85 (55%), Positives = 57/85 (67%), Gaps = 4/85 (4%)
Query: 8 LPIEPLIG-NIKTELSN-HNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELE 65
LP LI ++K E S+ HNDS S A S + S + ++ RRQRTHFTS QL ELE
Sbjct: 58 LPKLELISLDVKQEHSDDHNDST--SPADSSGNGSTSGGKIQKPRRQRTHFTSHQLTELE 115
Query: 66 ATFARNRYPDMSTREEIAMWTNLTE 90
FARNRYPDM+ REEIA+W +LTE
Sbjct: 116 NWFARNRYPDMACREEIAVWISLTE 140
>gi|82395410|gb|ABB72469.1| PTX-paired class homeobox protein [Nematostella vectensis]
gi|110339195|gb|ABG67861.1| PITX, partial [Nematostella vectensis]
Length = 60
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/43 (81%), Positives = 38/43 (88%)
Query: 49 QRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
QRRQRTHFTS QLQ+LE TF RNRYPDM REEIA++TNLTEA
Sbjct: 1 QRRQRTHFTSFQLQQLEGTFGRNRYPDMQMREEIALYTNLTEA 43
>gi|258503919|gb|ACV72689.1| UNC-30 [Caenorhabditis remanei]
gi|258503921|gb|ACV72690.1| UNC-30 [Caenorhabditis remanei]
gi|258503945|gb|ACV72702.1| UNC-30 [Caenorhabditis remanei]
Length = 293
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/85 (55%), Positives = 57/85 (67%), Gaps = 4/85 (4%)
Query: 8 LPIEPLIG-NIKTELSN-HNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELE 65
LP LI ++K E S+ HNDS S A S + S + ++ RRQRTHFTS QL ELE
Sbjct: 58 LPKLELISLDVKQEHSDDHNDST--SPADSSGNGSTSGGKIQKPRRQRTHFTSHQLTELE 115
Query: 66 ATFARNRYPDMSTREEIAMWTNLTE 90
FARNRYPDM+ REEIA+W +LTE
Sbjct: 116 NWFARNRYPDMACREEIAVWISLTE 140
>gi|258503917|gb|ACV72688.1| UNC-30 [Caenorhabditis remanei]
gi|258503923|gb|ACV72691.1| UNC-30 [Caenorhabditis remanei]
gi|258503925|gb|ACV72692.1| UNC-30 [Caenorhabditis remanei]
gi|258503927|gb|ACV72693.1| UNC-30 [Caenorhabditis remanei]
gi|258503933|gb|ACV72696.1| UNC-30 [Caenorhabditis remanei]
gi|258503939|gb|ACV72699.1| UNC-30 [Caenorhabditis remanei]
gi|258503943|gb|ACV72701.1| UNC-30 [Caenorhabditis remanei]
Length = 293
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/85 (55%), Positives = 57/85 (67%), Gaps = 4/85 (4%)
Query: 8 LPIEPLIG-NIKTELSN-HNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELE 65
LP LI ++K E S+ HNDS S A S + S + ++ RRQRTHFTS QL ELE
Sbjct: 58 LPKLELISLDVKQEHSDDHNDST--SPADSSGNGSTSGGKIQKPRRQRTHFTSHQLTELE 115
Query: 66 ATFARNRYPDMSTREEIAMWTNLTE 90
FARNRYPDM+ REEIA+W +LTE
Sbjct: 116 NWFARNRYPDMACREEIAVWISLTE 140
>gi|402591364|gb|EJW85293.1| homeobox domain-containing protein [Wuchereria bancrofti]
Length = 285
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 53/79 (67%), Gaps = 1/79 (1%)
Query: 12 PLIGNIKTELSNHNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARN 71
P I + K E + IE ++S ++ +S++ RRQRTHFTS QL ELE F+RN
Sbjct: 195 PKIEDGKKEYDASSGGIECDGNSNASPDT-CLISSQKPRRQRTHFTSHQLTELENWFSRN 253
Query: 72 RYPDMSTREEIAMWTNLTE 90
RYPDM+TREEIA+W +LTE
Sbjct: 254 RYPDMATREEIALWISLTE 272
>gi|170589295|ref|XP_001899409.1| Homeobox domain containing protein [Brugia malayi]
gi|158593622|gb|EDP32217.1| Homeobox domain containing protein [Brugia malayi]
Length = 417
Score = 75.1 bits (183), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 53/79 (67%), Gaps = 1/79 (1%)
Query: 12 PLIGNIKTELSNHNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARN 71
P I + K E + IE ++S ++ +S++ RRQRTHFTS QL ELE F+RN
Sbjct: 178 PKIEDGKKEYDASSGGIECDGNSNASPDT-CLISSQKPRRQRTHFTSHQLTELENWFSRN 236
Query: 72 RYPDMSTREEIAMWTNLTE 90
RYPDM+TREEIA+W +LTE
Sbjct: 237 RYPDMATREEIALWISLTE 255
>gi|261245041|ref|NP_001158396.1| paired-like homeodomain 2 [Saccoglossus kowalevskii]
gi|90659994|gb|ABD97273.1| pituitary homeobox transcription factor [Saccoglossus kowalevskii]
Length = 306
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 34/37 (91%), Positives = 35/37 (94%)
Query: 54 THFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTE 90
THFTSQQLQELEA FARNRYPDMSTREEI+ WTNLTE
Sbjct: 97 THFTSQQLQELEAHFARNRYPDMSTREEISAWTNLTE 133
>gi|344242147|gb|EGV98250.1| Pituitary homeobox 3 [Cricetulus griseus]
Length = 214
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/59 (64%), Positives = 44/59 (74%), Gaps = 1/59 (1%)
Query: 24 HNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEI 82
H+DS E +SA + ++ K+QRRQ HFTSQQLQELEATF RNRYPDMSTREEI
Sbjct: 96 HSDS-EKASASLPGGSPEDGSLKKKQRRQSKHFTSQQLQELEATFQRNRYPDMSTREEI 153
>gi|258503929|gb|ACV72694.1| UNC-30 [Caenorhabditis remanei]
gi|258503935|gb|ACV72697.1| UNC-30 [Caenorhabditis remanei]
gi|258503937|gb|ACV72698.1| UNC-30 [Caenorhabditis remanei]
Length = 293
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/85 (55%), Positives = 57/85 (67%), Gaps = 4/85 (4%)
Query: 8 LPIEPLIG-NIKTELSN-HNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELE 65
LP LI ++K E S+ HNDS S A S + S + ++ RRQRTHFTS QL ELE
Sbjct: 58 LPKLELISLDVKQENSDDHNDST--SPADSSGNGSTSGGKIQKPRRQRTHFTSHQLTELE 115
Query: 66 ATFARNRYPDMSTREEIAMWTNLTE 90
FARNRYPDM+ REEIA+W +LTE
Sbjct: 116 NWFARNRYPDMACREEIAVWISLTE 140
>gi|260802145|ref|XP_002595953.1| hypothetical protein BRAFLDRAFT_267830 [Branchiostoma floridae]
gi|229281206|gb|EEN51965.1| hypothetical protein BRAFLDRAFT_267830 [Branchiostoma floridae]
Length = 332
Score = 74.3 bits (181), Expect = 8e-12, Method: Composition-based stats.
Identities = 43/60 (71%), Positives = 50/60 (83%)
Query: 32 SAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
S +D + + + +RQRRQRTHFTSQQLQELEA+FARNRYPDM+TREEIA WTNLTEA
Sbjct: 89 STQDVTQDDDEMRKRRRQRRQRTHFTSQQLQELEASFARNRYPDMATREEIAAWTNLTEA 148
>gi|324515845|gb|ADY46335.1| Homeobox protein unc-30 [Ascaris suum]
Length = 334
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 46/65 (70%), Gaps = 11/65 (16%)
Query: 37 SSNSKNTKNS-----------KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMW 85
+SN+ N +NS ++ RRQRTHFTS QL ELE F+RNRYPDM+TREEIA+W
Sbjct: 116 ASNADNDQNSAGSPETCLISNQKPRRQRTHFTSHQLTELENWFSRNRYPDMATREEIALW 175
Query: 86 TNLTE 90
+LTE
Sbjct: 176 ISLTE 180
>gi|209947389|gb|ACI97436.1| paired superclass homeobox transcription factor Pitx [Lottia
gigantea]
Length = 196
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/36 (91%), Positives = 35/36 (97%)
Query: 56 FTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
FTSQQLQELEATFARNRYPDM+TREEI+ WTNLTEA
Sbjct: 1 FTSQQLQELEATFARNRYPDMATREEISAWTNLTEA 36
>gi|75025938|sp|Q9U637.1|PITX_BRABE RecName: Full=Pituitary homeobox x; AltName: Full=Bicoid type
transcription factor Pitx; Short=BbPtx; AltName:
Full=Homeobox protein Ptx; AltName: Full=Paired-like
homeodomain transcription factor x
gi|6110623|gb|AAF03901.1|AF195616_1 bicoid type transcription factor Pitx [Branchiostoma belcheri]
Length = 331
Score = 73.2 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 35/38 (92%), Positives = 37/38 (97%)
Query: 54 THFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
THFTSQQLQELEA+FARNRYPDM+TREEIA WTNLTEA
Sbjct: 110 THFTSQQLQELEASFARNRYPDMATREEIAAWTNLTEA 147
>gi|197210933|gb|ACH48392.1| Pitx2 [Maylandia zebra]
Length = 199
Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/34 (94%), Positives = 33/34 (97%)
Query: 58 SQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
SQQLQELEATF RNRYPDMSTREEIA+WTNLTEA
Sbjct: 4 SQQLQELEATFERNRYPDMSTREEIAVWTNLTEA 37
>gi|374533824|gb|AEZ53825.1| paired-like homeodomain 2, partial [Spea multiplicata]
gi|374533826|gb|AEZ53826.1| paired-like homeodomain 2, partial [Scaphiopus couchii]
gi|374533828|gb|AEZ53827.1| paired-like homeodomain 2, partial [Scaphiopus holbrookii]
Length = 195
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/34 (94%), Positives = 33/34 (97%)
Query: 58 SQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
SQQLQELEATF RNRYPDMSTREEIA+WTNLTEA
Sbjct: 1 SQQLQELEATFQRNRYPDMSTREEIAVWTNLTEA 34
>gi|23094220|emb|CAD27489.1| paired superclass homeobox transcription factor [Branchiostoma
floridae]
Length = 209
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/34 (91%), Positives = 33/34 (97%)
Query: 58 SQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
SQQLQELEA+FARNRYPDM+TREEIA WTNLTEA
Sbjct: 1 SQQLQELEASFARNRYPDMATREEIAAWTNLTEA 34
>gi|449668650|ref|XP_002164986.2| PREDICTED: uncharacterized protein LOC100211037 [Hydra
magnipapillata]
Length = 250
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 47/80 (58%), Gaps = 11/80 (13%)
Query: 12 PLIGNIKTELSNHNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARN 71
P+ +K ++ N D+ ++ D+ R RRQRTHFT QL LE FARN
Sbjct: 22 PVQARVKQDVENKEDTSGYTAGVDN-----------RIRRQRTHFTVTQLHRLETCFARN 70
Query: 72 RYPDMSTREEIAMWTNLTEA 91
RYPDM+ RE+IA W +LTE+
Sbjct: 71 RYPDMAMREDIAQWCSLTES 90
>gi|281494554|gb|ADA72029.1| PitxA, partial [Lethenteron camtschaticum]
Length = 187
Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/33 (93%), Positives = 32/33 (96%)
Query: 59 QQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
QQLQELEATF RNRYPDMSTREEIA+WTNLTEA
Sbjct: 1 QQLQELEATFQRNRYPDMSTREEIAVWTNLTEA 33
>gi|38146909|gb|AAR11849.1| Pitx-1 [Gasterosteus aculeatus]
Length = 173
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/32 (93%), Positives = 31/32 (96%)
Query: 60 QLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
QLQELEATF RNRYPDMSTREEIA+WTNLTEA
Sbjct: 3 QLQELEATFQRNRYPDMSTREEIAVWTNLTEA 34
>gi|133778704|gb|AAI33878.1| Arx protein [Danio rerio]
Length = 382
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 48/78 (61%), Gaps = 4/78 (5%)
Query: 18 KTELSNHNDS----IEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRY 73
K E S HND EDS + S+S+ ++QRR RT FTS QL+ELE F + Y
Sbjct: 180 KDEESLHNDGDVKDGEDSVCLSAGSDSEEGMLKRKQRRYRTTFTSYQLEELERAFQKTHY 239
Query: 74 PDMSTREEIAMWTNLTEA 91
PD+ TREE+AM +LTEA
Sbjct: 240 PDVFTREELAMRLDLTEA 257
>gi|18858285|ref|NP_571459.1| aristaless-related homeobox protein [Danio rerio]
gi|18202032|sp|O42115.1|ARX_DANRE RecName: Full=Aristaless-related homeobox protein; Short=ARX
gi|2317261|dbj|BAA21764.1| Arx homeoprotein [Danio rerio]
gi|190337749|gb|AAI63865.1| Aristaless related homeobox [Danio rerio]
gi|190337753|gb|AAI63872.1| Aristaless related homeobox [Danio rerio]
Length = 453
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 48/78 (61%), Gaps = 4/78 (5%)
Query: 18 KTELSNHNDS----IEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRY 73
K E S HND EDS + S+S+ ++QRR RT FTS QL+ELE F + Y
Sbjct: 180 KDEESLHNDGDVKDGEDSVCLSAGSDSEEGMLKRKQRRYRTTFTSYQLEELERAFQKTHY 239
Query: 74 PDMSTREEIAMWTNLTEA 91
PD+ TREE+AM +LTEA
Sbjct: 240 PDVFTREELAMRLDLTEA 257
>gi|328778292|ref|XP_394847.4| PREDICTED: protein gooseberry-like [Apis mellifera]
Length = 426
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 28 IEDSSAKDSSSNSKNTKNSKR-QRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWT 86
+ SS DS + S+ KR QRR RT FT +QL++LEA F R +YPD+ TREE+A T
Sbjct: 187 LGGSSGDDSDTESEPGIALKRKQRRSRTTFTGEQLEQLEAAFHRTQYPDVYTREELAQKT 246
Query: 87 NLTEA 91
NLTEA
Sbjct: 247 NLTEA 251
>gi|397497709|ref|XP_003819648.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein ARX [Pan paniscus]
Length = 633
Score = 64.3 bits (155), Expect = 8e-09, Method: Composition-based stats.
Identities = 39/89 (43%), Positives = 53/89 (59%), Gaps = 3/89 (3%)
Query: 3 ERGRILPIEPLIGNIKTELSNHNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQ 62
E G + P E L+ + E + D EDS + S+S+ ++QRR RT FTS QL+
Sbjct: 353 EGGELSPKEELL--LHPEDAEGKDG-EDSVCLSAGSDSEEGLLKRKQRRYRTTFTSYQLE 409
Query: 63 ELEATFARNRYPDMSTREEIAMWTNLTEA 91
ELE F + YPD+ TREE+AM +LTEA
Sbjct: 410 ELERAFQKTHYPDVFTREELAMRLDLTEA 438
>gi|383852872|ref|XP_003701949.1| PREDICTED: protein gooseberry-neuro-like, partial [Megachile
rotundata]
Length = 398
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 28 IEDSSAKDSSSNSKNTKNSKR-QRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWT 86
+ SS DS + S+ KR QRR RT FT +QL++LEA F R +YPD+ TREE+A T
Sbjct: 159 LGGSSGDDSDTESEPGIALKRKQRRSRTTFTGEQLEQLEAAFHRTQYPDVYTREELAQKT 218
Query: 87 NLTEA 91
NLTEA
Sbjct: 219 NLTEA 223
>gi|399153233|dbj|BAM35169.1| homeodomain transcription factor [Halocynthia roretzi]
gi|399153235|dbj|BAM35170.1| homeodomain transcription factor [Halocynthia roretzi]
Length = 608
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/82 (52%), Positives = 51/82 (62%), Gaps = 7/82 (8%)
Query: 9 PIEPLIGNIKTELSNHNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATF 68
P E G+ K E + E+S + D KN +RQRRQRTHFTS QLQELE F
Sbjct: 363 PTEGEDGDTKGE----GGATENSQSDDPDGEGKN---KRRQRRQRTHFTSHQLQELETVF 415
Query: 69 ARNRYPDMSTREEIAMWTNLTE 90
A NRYPDMSTRE I+ +T L+E
Sbjct: 416 AHNRYPDMSTREHISQYTTLSE 437
>gi|350420704|ref|XP_003492596.1| PREDICTED: protein gooseberry-like [Bombus impatiens]
Length = 404
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 28 IEDSSAKDSSSNSKNTKNSKR-QRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWT 86
+ SS DS + S+ KR QRR RT FT +QL++LEA F R +YPD+ TREE+A T
Sbjct: 165 LGGSSGDDSDTESEPGIALKRKQRRSRTTFTGEQLEQLEAAFHRTQYPDVYTREELAQKT 224
Query: 87 NLTEA 91
NLTEA
Sbjct: 225 NLTEA 229
>gi|380027472|ref|XP_003697447.1| PREDICTED: protein gooseberry-like [Apis florea]
Length = 405
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 28 IEDSSAKDSSSNSKNTKNSKR-QRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWT 86
+ SS DS + S+ KR QRR RT FT +QL++LEA F R +YPD+ TREE+A T
Sbjct: 166 LGGSSGDDSDTESEPGIALKRKQRRSRTTFTGEQLEQLEAAFHRTQYPDVYTREELAQKT 225
Query: 87 NLTEA 91
NLTEA
Sbjct: 226 NLTEA 230
>gi|355757247|gb|EHH60772.1| Aristaless-related homeobox [Macaca fascicularis]
Length = 290
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 53/89 (59%), Gaps = 3/89 (3%)
Query: 3 ERGRILPIEPLIGNIKTELSNHNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQ 62
E G + P E L+ + E + D EDS + S+S+ ++QRR RT FTS QL+
Sbjct: 107 EGGELSPKEELL--LHPEDAEGKDG-EDSVCLSAGSDSEEGLLKRKQRRYRTTFTSYQLE 163
Query: 63 ELEATFARNRYPDMSTREEIAMWTNLTEA 91
ELE F + YPD+ TREE+AM +LTEA
Sbjct: 164 ELERAFQKTHYPDVFTREELAMRLDLTEA 192
>gi|403263874|ref|XP_003924228.1| PREDICTED: homeobox protein ARX [Saimiri boliviensis boliviensis]
Length = 464
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 39/89 (43%), Positives = 53/89 (59%), Gaps = 3/89 (3%)
Query: 3 ERGRILPIEPLIGNIKTELSNHNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQ 62
E G + P E L+ + E + D EDS + S+S+ ++QRR RT FTS QL+
Sbjct: 187 EGGELSPKEELL--LHPEDAEGKDG-EDSVCLSAGSDSEEGLLKRKQRRYRTTFTSYQLE 243
Query: 63 ELEATFARNRYPDMSTREEIAMWTNLTEA 91
ELE F + YPD+ TREE+AM +LTEA
Sbjct: 244 ELERAFQKTHYPDVFTREELAMRLDLTEA 272
>gi|15625548|gb|AAL04156.1|AF411465_1 transcription factor Pax7 [Petromyzon marinus]
Length = 505
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 33/65 (50%), Positives = 43/65 (66%), Gaps = 3/65 (4%)
Query: 27 SIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWT 86
++EDSS DS + ++QRR RT FT++QL+ELE F R YPD+ TREE+A T
Sbjct: 191 TVEDSSDVDSEPD---LPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRT 247
Query: 87 NLTEA 91
LTEA
Sbjct: 248 KLTEA 252
>gi|310893853|gb|ADP37890.1| paired-domain transcription factor Pax3/7-A [Lethenteron
camtschaticum]
Length = 507
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 33/65 (50%), Positives = 43/65 (66%), Gaps = 3/65 (4%)
Query: 27 SIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWT 86
++EDSS DS + ++QRR RT FT++QL+ELE F R YPD+ TREE+A T
Sbjct: 193 TVEDSSDVDSEPD---LPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRT 249
Query: 87 NLTEA 91
LTEA
Sbjct: 250 KLTEA 254
>gi|87299449|dbj|BAE79557.1| pituitary homeobox [Halocynthia roretzi]
Length = 281
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/82 (52%), Positives = 51/82 (62%), Gaps = 7/82 (8%)
Query: 9 PIEPLIGNIKTELSNHNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATF 68
P E G+ K E + E+S + D KN +RQRRQRTHFTS QLQELE F
Sbjct: 36 PTEGEDGDTKGE----GGATENSQSDDPDGEGKN---KRRQRRQRTHFTSHQLQELETVF 88
Query: 69 ARNRYPDMSTREEIAMWTNLTE 90
A NRYPDMSTRE I+ +T L+E
Sbjct: 89 AHNRYPDMSTREHISQYTTLSE 110
>gi|426395443|ref|XP_004063982.1| PREDICTED: homeobox protein ARX [Gorilla gorilla gorilla]
Length = 525
Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 39/89 (43%), Positives = 53/89 (59%), Gaps = 3/89 (3%)
Query: 3 ERGRILPIEPLIGNIKTELSNHNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQ 62
E G + P E L+ + E + D EDS + S+S+ ++QRR RT FTS QL+
Sbjct: 248 EGGELSPKEELL--LHPEDAEGKDG-EDSVCLSAGSDSEEGLLKRKQRRYRTTFTSYQLE 304
Query: 63 ELEATFARNRYPDMSTREEIAMWTNLTEA 91
ELE F + YPD+ TREE+AM +LTEA
Sbjct: 305 ELERAFQKTHYPDVFTREELAMRLDLTEA 333
>gi|24497589|ref|NP_620689.1| homeobox protein ARX [Homo sapiens]
gi|27923733|sp|Q96QS3.1|ARX_HUMAN RecName: Full=Homeobox protein ARX; AltName:
Full=Aristaless-related homeobox
gi|15315600|gb|AAK93901.1| aristaless-related homeobox protein ARX [Homo sapiens]
gi|119619437|gb|EAW99031.1| aristaless related homeobox, isoform CRA_a [Homo sapiens]
Length = 562
Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 39/89 (43%), Positives = 53/89 (59%), Gaps = 3/89 (3%)
Query: 3 ERGRILPIEPLIGNIKTELSNHNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQ 62
E G + P E L+ + E + D EDS + S+S+ ++QRR RT FTS QL+
Sbjct: 285 EGGELSPKEELL--LHPEDAEGKDG-EDSVCLSAGSDSEEGLLKRKQRRYRTTFTSYQLE 341
Query: 63 ELEATFARNRYPDMSTREEIAMWTNLTEA 91
ELE F + YPD+ TREE+AM +LTEA
Sbjct: 342 ELERAFQKTHYPDVFTREELAMRLDLTEA 370
>gi|328713660|ref|XP_001942974.2| PREDICTED: protein gooseberry-like [Acyrthosiphon pisum]
Length = 440
Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 41/82 (50%), Positives = 54/82 (65%), Gaps = 3/82 (3%)
Query: 13 LIGNIKTELSNHN-DSI-EDSSAKDSSSNSKNTKNSKR-QRRQRTHFTSQQLQELEATFA 69
L G + EL NH+ D I SSA DS + S+ + KR QRR RT FT +QL++LE F
Sbjct: 143 LRGGRRDELKNHSIDGILGPSSADDSDTESEPGFHLKRKQRRSRTTFTGEQLEDLERAFH 202
Query: 70 RNRYPDMSTREEIAMWTNLTEA 91
+++YPD+ TREE+A T LTEA
Sbjct: 203 KSQYPDVYTREELAQKTKLTEA 224
>gi|351700009|gb|EHB02928.1| Dorsal root ganglia homeobox protein [Heterocephalus glaber]
Length = 443
Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 29/45 (64%), Positives = 35/45 (77%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT QQL+ LEA FA+ YPD+ TREE+AM NLTEA
Sbjct: 37 RKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEA 81
>gi|50363053|gb|AAT75269.1| pituitary homeobox transcription factor [Botryllus schlosseri]
Length = 233
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/47 (72%), Positives = 40/47 (85%)
Query: 44 KNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTE 90
KN +RQRRQRTHF+SQQLQELE F RNRYPDMSTRE+++ W L+E
Sbjct: 16 KNKRRQRRQRTHFSSQQLQELENLFTRNRYPDMSTREDMSKWIGLSE 62
>gi|380805315|gb|AFE74533.1| homeobox protein ARX, partial [Macaca mulatta]
Length = 161
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 54/91 (59%), Gaps = 3/91 (3%)
Query: 1 MLERGRILPIEPLIGNIKTELSNHNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQ 60
+ E G + P E L+ + E + D EDS + S+S+ ++QRR RT FTS Q
Sbjct: 9 VTEGGELSPKEELL--LHPEDAEGKDG-EDSVCLSAGSDSEEGLLKRKQRRYRTTFTSYQ 65
Query: 61 LQELEATFARNRYPDMSTREEIAMWTNLTEA 91
L+ELE F + YPD+ TREE+AM +LTEA
Sbjct: 66 LEELERAFQKTHYPDVFTREELAMRLDLTEA 96
>gi|113120207|gb|ABI30251.1| Rx1 [Nematostella vectensis]
Length = 243
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 52/89 (58%), Gaps = 2/89 (2%)
Query: 5 GRILPIEPLI-GNIKTELSNHNDSIEDSSAKDSSSNSKNTKNSKR-QRRQRTHFTSQQLQ 62
G ++ +E L G+ ++ D + S D S+S+N +R QRR RT FT QQLQ
Sbjct: 22 GDVIGLEALSSGHPSVVYRSYQDHPDQSHTPDHGSDSENPATVRRKQRRNRTTFTKQQLQ 81
Query: 63 ELEATFARNRYPDMSTREEIAMWTNLTEA 91
ELE F + YPD++ REE+A N++EA
Sbjct: 82 ELEKVFEKKHYPDIALREELAAKINISEA 110
>gi|109130220|ref|XP_001091313.1| PREDICTED: homeobox protein ARX [Macaca mulatta]
Length = 562
Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 39/89 (43%), Positives = 53/89 (59%), Gaps = 3/89 (3%)
Query: 3 ERGRILPIEPLIGNIKTELSNHNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQ 62
E G + P E L+ + E + D EDS + S+S+ ++QRR RT FTS QL+
Sbjct: 285 EGGELSPKEELL--LHPEDAEGKDG-EDSVCLSAGSDSEEGLLKRKQRRYRTTFTSYQLE 341
Query: 63 ELEATFARNRYPDMSTREEIAMWTNLTEA 91
ELE F + YPD+ TREE+AM +LTEA
Sbjct: 342 ELERAFQKTHYPDVFTREELAMRLDLTEA 370
>gi|440808048|gb|AGC24167.1| Phox2 [Lymnaea stagnalis]
Length = 343
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/55 (58%), Positives = 39/55 (70%)
Query: 37 SSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
S +S + ++QRR RT FTS QL+ELE FA YPD+ TREEIAM T+LTEA
Sbjct: 125 SHDSSVSPEKRKQRRIRTTFTSAQLKELEKAFAETHYPDIYTREEIAMKTDLTEA 179
>gi|348507210|ref|XP_003441149.1| PREDICTED: dorsal root ganglia homeobox protein-like [Oreochromis
niloticus]
Length = 308
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 35/45 (77%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT QQL+ LEA FA+ YPD+ TREE+AM NLTEA
Sbjct: 40 RKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEA 84
>gi|301782575|ref|XP_002926705.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein ARX-like
[Ailuropoda melanoleuca]
Length = 459
Score = 62.8 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 39/89 (43%), Positives = 53/89 (59%), Gaps = 3/89 (3%)
Query: 3 ERGRILPIEPLIGNIKTELSNHNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQ 62
E G + P E L+ + E + D EDS + S+S+ ++QRR RT FTS QL+
Sbjct: 242 EGGELSPKEELL--LHPEDAEGKDG-EDSVCLSAGSDSEEGLLKRKQRRYRTTFTSYQLE 298
Query: 63 ELEATFARNRYPDMSTREEIAMWTNLTEA 91
ELE F + YPD+ TREE+AM +LTEA
Sbjct: 299 ELERAFQKTHYPDVFTREELAMRLDLTEA 327
>gi|242024058|ref|XP_002432447.1| homeobox protein arx, putative [Pediculus humanus corporis]
gi|212517880|gb|EEB19709.1| homeobox protein arx, putative [Pediculus humanus corporis]
Length = 412
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 44/68 (64%), Gaps = 2/68 (2%)
Query: 26 DSIEDSSAKDSSSNSK--NTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIA 83
D + S+A D++S + ++QRR RT FTS QL+ELE FAR YPD+ TREE+A
Sbjct: 119 DPVGSSNASDNNSECELDEFAPKRKQRRYRTTFTSFQLEELEKAFARTHYPDVFTREELA 178
Query: 84 MWTNLTEA 91
M LTEA
Sbjct: 179 MKIGLTEA 186
>gi|345317707|ref|XP_001510573.2| PREDICTED: homeobox protein ARX-like, partial [Ornithorhynchus
anatinus]
Length = 159
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 42/67 (62%)
Query: 25 NDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAM 84
D ED + S+S+ ++QRR RT FTS QL+ELE F + YPD+ TREE+AM
Sbjct: 90 KDEGEDGICLSAGSDSEEGLLKRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAM 149
Query: 85 WTNLTEA 91
+LTEA
Sbjct: 150 RLDLTEA 156
>gi|410901415|ref|XP_003964191.1| PREDICTED: dorsal root ganglia homeobox protein-like [Takifugu
rubripes]
Length = 307
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 35/45 (77%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT QQL+ LEA FA+ YPD+ TREE+AM NLTEA
Sbjct: 40 RKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEA 84
>gi|148697792|gb|EDL29739.1| aristaless related homeobox gene (Drosophila) [Mus musculus]
Length = 378
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 39/89 (43%), Positives = 53/89 (59%), Gaps = 3/89 (3%)
Query: 3 ERGRILPIEPLIGNIKTELSNHNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQ 62
E G + P E L+ + E + D EDS + S+S+ ++QRR RT FTS QL+
Sbjct: 101 EGGELSPKEELL--LHPEDAEGKDG-EDSVCLSAGSDSEEGLLKRKQRRYRTTFTSYQLE 157
Query: 63 ELEATFARNRYPDMSTREEIAMWTNLTEA 91
ELE F + YPD+ TREE+AM +LTEA
Sbjct: 158 ELERAFQKTHYPDVFTREELAMRLDLTEA 186
>gi|317419844|emb|CBN81880.1| Aristaless-related homeobox protein [Dicentrarchus labrax]
Length = 463
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 32/63 (50%), Positives = 42/63 (66%)
Query: 29 EDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNL 88
EDS + S+S+ ++QRR RT FTS QL+ELE F + YPD+ TREE+AM +L
Sbjct: 201 EDSVCLSAGSDSEEGMLKRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRLDL 260
Query: 89 TEA 91
TEA
Sbjct: 261 TEA 263
>gi|154146243|ref|NP_001093644.1| homeobox protein ARX [Rattus norvegicus]
gi|160016491|sp|A6YP92.1|ARX_RAT RecName: Full=Homeobox protein ARX; AltName:
Full=Aristaless-related homeobox
gi|149688998|gb|ABR27821.1| aristaless-related homeobox protein [Rattus norvegicus]
Length = 566
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 39/89 (43%), Positives = 53/89 (59%), Gaps = 3/89 (3%)
Query: 3 ERGRILPIEPLIGNIKTELSNHNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQ 62
E G + P E L+ + E + D EDS + S+S+ ++QRR RT FTS QL+
Sbjct: 289 EGGELSPKEELL--LHPEDAEGKDG-EDSVCLSAGSDSEEGLLKRKQRRYRTTFTSYQLE 345
Query: 63 ELEATFARNRYPDMSTREEIAMWTNLTEA 91
ELE F + YPD+ TREE+AM +LTEA
Sbjct: 346 ELERAFQKTHYPDVFTREELAMRLDLTEA 374
>gi|348561355|ref|XP_003466478.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein ARX-like [Cavia
porcellus]
Length = 424
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 39/89 (43%), Positives = 53/89 (59%), Gaps = 3/89 (3%)
Query: 3 ERGRILPIEPLIGNIKTELSNHNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQ 62
E G + P E L+ + E + D EDS + S+S+ ++QRR RT FTS QL+
Sbjct: 200 EGGELSPKEELL--LHPEDTEGKDG-EDSVCLSAGSDSEEGLLKRKQRRYRTTFTSYQLE 256
Query: 63 ELEATFARNRYPDMSTREEIAMWTNLTEA 91
ELE F + YPD+ TREE+AM +LTEA
Sbjct: 257 ELERAFQKTHYPDVFTREELAMRLDLTEA 285
>gi|332017590|gb|EGI58290.1| Protein gooseberry-neuro [Acromyrmex echinatior]
Length = 398
Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 28 IEDSSAKDSSSNSKNTKNSKR-QRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWT 86
+ SS DS + S+ KR QRR RT FT +QL++LEA F R +YPD+ TREE+A T
Sbjct: 159 LAGSSGDDSDTESEPGIALKRKQRRSRTTFTGEQLEQLEAAFHRTQYPDVYTREELAQKT 218
Query: 87 NLTEA 91
LTEA
Sbjct: 219 KLTEA 223
>gi|301608175|ref|XP_002933659.1| PREDICTED: homeobox protein ARX-like [Xenopus (Silurana)
tropicalis]
Length = 536
Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 42/63 (66%)
Query: 29 EDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNL 88
EDS + S+S+ ++QRR RT FTS QL+ELE F + YPD+ TREE+AM +L
Sbjct: 281 EDSVCLSAGSDSEEGMLKRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRLDL 340
Query: 89 TEA 91
TEA
Sbjct: 341 TEA 343
>gi|291404049|ref|XP_002718385.1| PREDICTED: paired related homeobox protein-like 1-like
[Oryctolagus cuniculus]
Length = 269
Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 45/70 (64%), Gaps = 3/70 (4%)
Query: 25 NDSIEDSSAKDSSSNSKNTKNS---KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREE 81
D + SA SS ++ + + ++QRR RT FT QQL+ LEA FA+ YPD+ TREE
Sbjct: 12 GDLLPVGSAPFSSHSTGDFDDGFLRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREE 71
Query: 82 IAMWTNLTEA 91
+AM NLTEA
Sbjct: 72 LAMKINLTEA 81
>gi|148229045|ref|NP_001086450.1| aristaless related homeobox [Xenopus laevis]
gi|46395020|gb|AAS91656.1| aristaless-related homeobox 2 [Xenopus laevis]
Length = 528
Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 42/63 (66%)
Query: 29 EDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNL 88
EDS + S+S+ ++QRR RT FTS QL+ELE F + YPD+ TREE+AM +L
Sbjct: 273 EDSVCLSAGSDSEEGMLKRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRLDL 332
Query: 89 TEA 91
TEA
Sbjct: 333 TEA 335
>gi|213623920|gb|AAI70401.1| Aristaless-related homeobox 2 [Xenopus laevis]
gi|213625348|gb|AAI70403.1| Aristaless-related homeobox 2 [Xenopus laevis]
Length = 528
Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 42/63 (66%)
Query: 29 EDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNL 88
EDS + S+S+ ++QRR RT FTS QL+ELE F + YPD+ TREE+AM +L
Sbjct: 273 EDSVCLSAGSDSEEGMLKRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRLDL 332
Query: 89 TEA 91
TEA
Sbjct: 333 TEA 335
>gi|302564109|ref|NP_001181527.1| dorsal root ganglia homeobox protein [Macaca mulatta]
gi|402880151|ref|XP_003903676.1| PREDICTED: dorsal root ganglia homeobox protein [Papio anubis]
gi|355782761|gb|EHH64682.1| hypothetical protein EGM_17968 [Macaca fascicularis]
Length = 268
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 35/45 (77%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT QQL+ LEA FA+ YPD+ TREE+AM NLTEA
Sbjct: 36 RKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEA 80
>gi|355562412|gb|EHH19006.1| hypothetical protein EGK_19626 [Macaca mulatta]
Length = 268
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 35/45 (77%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT QQL+ LEA FA+ YPD+ TREE+AM NLTEA
Sbjct: 36 RKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEA 80
>gi|332258274|ref|XP_003278225.1| PREDICTED: dorsal root ganglia homeobox protein [Nomascus
leucogenys]
Length = 268
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 35/45 (77%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT QQL+ LEA FA+ YPD+ TREE+AM NLTEA
Sbjct: 36 RKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEA 80
>gi|432905591|ref|XP_004077452.1| PREDICTED: dorsal root ganglia homeobox protein-like [Oryzias
latipes]
Length = 308
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 35/45 (77%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT QQL+ LEA FA+ YPD+ TREE+AM NLTEA
Sbjct: 40 RKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEA 84
>gi|114635169|ref|XP_001138723.1| PREDICTED: dorsal root ganglia homeobox protein [Pan troglodytes]
Length = 268
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 35/45 (77%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT QQL+ LEA FA+ YPD+ TREE+AM NLTEA
Sbjct: 36 RKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEA 80
>gi|345792953|ref|XP_848719.2| PREDICTED: dorsal root ganglia homeobox protein [Canis lupus
familiaris]
Length = 287
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 35/45 (77%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT QQL+ LEA FA+ YPD+ TREE+AM NLTEA
Sbjct: 55 RKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEA 99
>gi|119619438|gb|EAW99032.1| aristaless related homeobox, isoform CRA_b [Homo sapiens]
Length = 258
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 47/79 (59%), Gaps = 5/79 (6%)
Query: 18 KTELSNHNDSIEDSSAKDS-----SSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNR 72
K EL H + E +DS S+S+ ++QRR RT FTS QL+ELE F +
Sbjct: 159 KEELLLHPEDAEGKDGEDSVCLSAGSDSEEGLLKRKQRRYRTTFTSYQLEELERAFQKTH 218
Query: 73 YPDMSTREEIAMWTNLTEA 91
YPD+ TREE+AM +LTEA
Sbjct: 219 YPDVFTREELAMRLDLTEA 237
>gi|297686443|ref|XP_002820758.1| PREDICTED: dorsal root ganglia homeobox protein [Pongo abelii]
Length = 268
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 35/45 (77%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT QQL+ LEA FA+ YPD+ TREE+AM NLTEA
Sbjct: 36 RKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEA 80
>gi|168479562|dbj|BAG11537.1| paired-box protein 3/7 [Eptatretus burgeri]
Length = 451
Score = 62.0 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 32/65 (49%), Positives = 43/65 (66%), Gaps = 3/65 (4%)
Query: 27 SIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWT 86
+++DSS DS + ++QRR RT FT++QL+ELE F R YPD+ TREE+A T
Sbjct: 141 TVDDSSDIDSEPD---LPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRT 197
Query: 87 NLTEA 91
LTEA
Sbjct: 198 KLTEA 202
>gi|440808050|gb|AGC24168.1| Phox2 [Aplysia californica]
Length = 329
Score = 62.0 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 31/53 (58%), Positives = 38/53 (71%)
Query: 39 NSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
+S + ++QRR RT FTS QL+ELE FA YPD+ TREEIAM T+LTEA
Sbjct: 125 DSSVSPEKRKQRRIRTTFTSAQLKELEKAFAETHYPDIYTREEIAMKTDLTEA 177
>gi|296220129|ref|XP_002756185.1| PREDICTED: dorsal root ganglia homeobox protein [Callithrix
jacchus]
Length = 282
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 35/45 (77%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT QQL+ LEA FA+ YPD+ TREE+AM NLTEA
Sbjct: 50 RKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEA 94
>gi|426364705|ref|XP_004049438.1| PREDICTED: dorsal root ganglia homeobox protein [Gorilla gorilla
gorilla]
Length = 268
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 35/45 (77%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT QQL+ LEA FA+ YPD+ TREE+AM NLTEA
Sbjct: 36 RKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEA 80
>gi|307189638|gb|EFN73976.1| Protein gooseberry [Camponotus floridanus]
Length = 574
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 47/72 (65%), Gaps = 3/72 (4%)
Query: 23 NHN-DSI-EDSSAKDSSSNSKNTKNSKR-QRRQRTHFTSQQLQELEATFARNRYPDMSTR 79
NH+ D I SS DS + S+ KR QRR RT FT +QL++LEA F R +YPD+ TR
Sbjct: 159 NHSIDGILAGSSGDDSDTESEPGIALKRKQRRSRTTFTGEQLEQLEAAFHRTQYPDVYTR 218
Query: 80 EEIAMWTNLTEA 91
EE+A T LTEA
Sbjct: 219 EELAQKTKLTEA 230
>gi|348512008|ref|XP_003443535.1| PREDICTED: aristaless-related homeobox protein-like [Oreochromis
niloticus]
Length = 466
Score = 62.0 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 32/63 (50%), Positives = 42/63 (66%)
Query: 29 EDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNL 88
EDS + S+S+ ++QRR RT FTS QL+ELE F + YPD+ TREE+AM +L
Sbjct: 202 EDSVCLSAGSDSEEGMLKRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRLDL 261
Query: 89 TEA 91
TEA
Sbjct: 262 TEA 264
>gi|307212050|gb|EFN87933.1| Protein gooseberry-neuro [Harpegnathos saltator]
Length = 438
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 28 IEDSSAKDSSSNSKNTKNSKR-QRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWT 86
+ SS DS + S+ KR QRR RT FT +QL++LEA F R +YPD+ TREE+A T
Sbjct: 143 LAGSSGDDSDTESEPGIALKRKQRRSRTTFTGEQLEQLEAAFHRTQYPDVYTREELAQKT 202
Query: 87 NLTEA 91
LTEA
Sbjct: 203 KLTEA 207
>gi|338717161|ref|XP_001500343.3| PREDICTED: dorsal root ganglia homeobox protein-like [Equus
caballus]
Length = 265
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 35/45 (77%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT QQL+ LEA FA+ YPD+ TREE+AM NLTEA
Sbjct: 33 RKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEA 77
>gi|47229844|emb|CAG07040.1| unnamed protein product [Tetraodon nigroviridis]
Length = 591
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 49/88 (55%), Gaps = 10/88 (11%)
Query: 11 EPLIGN-------IKTELSNHNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQE 63
E L+G +K E + I+D S DS + ++QRR RT FT++QL+E
Sbjct: 214 EGLVGGSQTIRDKLKRERCPQGNRIDDGSDVDSE---PDLPLKRKQRRSRTTFTAEQLEE 270
Query: 64 LEATFARNRYPDMSTREEIAMWTNLTEA 91
LE F R YPD+ TREE+A T LTEA
Sbjct: 271 LEKAFERTHYPDIYTREELAQRTKLTEA 298
>gi|350422605|ref|XP_003493225.1| PREDICTED: hypothetical protein LOC100742723 [Bombus impatiens]
Length = 563
Score = 62.0 bits (149), Expect = 5e-08, Method: Composition-based stats.
Identities = 28/45 (62%), Positives = 36/45 (80%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT QQL+ELE+ FA+ YPD+ TRE++AM NLTEA
Sbjct: 237 RKQRRNRTTFTLQQLEELESAFAQTHYPDVFTREDLAMKINLTEA 281
>gi|395838112|ref|XP_003791968.1| PREDICTED: homeobox protein ARX [Otolemur garnettii]
Length = 570
Score = 62.0 bits (149), Expect = 5e-08, Method: Composition-based stats.
Identities = 39/89 (43%), Positives = 53/89 (59%), Gaps = 3/89 (3%)
Query: 3 ERGRILPIEPLIGNIKTELSNHNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQ 62
E G + P E L+ + E + D EDS + S+S+ ++QRR RT FTS QL+
Sbjct: 293 EGGELSPKEELL--LHPEDAEGKDG-EDSVCLSAGSDSEEGLLKRKQRRYRTTFTSYQLE 349
Query: 63 ELEATFARNRYPDMSTREEIAMWTNLTEA 91
ELE F + YPD+ TREE+AM +LTEA
Sbjct: 350 ELERAFQKTHYPDVFTREELAMRLDLTEA 378
>gi|322800798|gb|EFZ21674.1| hypothetical protein SINV_07081 [Solenopsis invicta]
Length = 405
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 28 IEDSSAKDSSSNSKNTKNSKR-QRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWT 86
+ SS DS + S+ KR QRR RT FT +QL++LEA F R +YPD+ TREE+A T
Sbjct: 166 LAGSSGDDSDTESEPGIALKRKQRRSRTTFTGEQLEQLEAAFHRTQYPDVYTREELAQKT 225
Query: 87 NLTEA 91
LTEA
Sbjct: 226 KLTEA 230
>gi|397475296|ref|XP_003809079.1| PREDICTED: dorsal root ganglia homeobox protein [Pan paniscus]
Length = 265
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 35/45 (77%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT QQL+ LEA FA+ YPD+ TREE+AM NLTEA
Sbjct: 33 RKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEA 77
>gi|341892467|gb|EGT48402.1| hypothetical protein CAEBREN_31131 [Caenorhabditis brenneri]
Length = 237
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/84 (48%), Positives = 49/84 (58%), Gaps = 5/84 (5%)
Query: 13 LIGN--IKTELSNHNDSIEDSS---AKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEAT 67
LIGN I+ SN + + SS A SS N ++QRR RT FTS QL+ELE
Sbjct: 112 LIGNEAIQRTSSNVLNGLPRSSLVGALCSSGAPLNPAERRKQRRIRTTFTSGQLKELERA 171
Query: 68 FARNRYPDMSTREEIAMWTNLTEA 91
F YPD+ TREEIAM +LTEA
Sbjct: 172 FCETHYPDIYTREEIAMRIDLTEA 195
>gi|348560754|ref|XP_003466178.1| PREDICTED: dorsal root ganglia homeobox protein-like [Cavia
porcellus]
Length = 263
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 35/45 (77%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT QQL+ LEA FA+ YPD+ TREE+AM NLTEA
Sbjct: 31 RKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEA 75
>gi|395858717|ref|XP_003801706.1| PREDICTED: dorsal root ganglia homeobox protein [Otolemur
garnettii]
Length = 263
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 35/45 (77%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT QQL+ LEA FA+ YPD+ TREE+AM NLTEA
Sbjct: 31 RKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEA 75
>gi|224042664|ref|XP_002195184.1| PREDICTED: homeobox protein ARX [Taeniopygia guttata]
Length = 509
Score = 61.6 bits (148), Expect = 5e-08, Method: Composition-based stats.
Identities = 31/63 (49%), Positives = 42/63 (66%)
Query: 29 EDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNL 88
E+S + S+S+ ++QRR RT FTS QL+ELE F + YPD+ TREE+AM +L
Sbjct: 255 EESVCLSAGSDSEEGLLKRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRLDL 314
Query: 89 TEA 91
TEA
Sbjct: 315 TEA 317
>gi|149034142|gb|EDL88912.1| paired related homeobox protein-like 1, isoform CRA_b [Rattus
norvegicus]
Length = 263
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 35/45 (77%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT QQL+ LEA FA+ YPD+ TREE+AM NLTEA
Sbjct: 31 RKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEA 75
>gi|426256164|ref|XP_004021711.1| PREDICTED: dorsal root ganglia homeobox protein [Ovis aries]
Length = 305
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 35/45 (77%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT QQL+ LEA FA+ YPD+ TREE+AM NLTEA
Sbjct: 31 RKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEA 75
>gi|410975579|ref|XP_003994208.1| PREDICTED: dorsal root ganglia homeobox protein [Felis catus]
Length = 263
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 35/45 (77%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT QQL+ LEA FA+ YPD+ TREE+AM NLTEA
Sbjct: 31 RKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEA 75
>gi|167900486|ref|NP_001108138.1| aristaless related homeobox [Canis lupus familiaris]
Length = 574
Score = 61.6 bits (148), Expect = 5e-08, Method: Composition-based stats.
Identities = 39/89 (43%), Positives = 53/89 (59%), Gaps = 3/89 (3%)
Query: 3 ERGRILPIEPLIGNIKTELSNHNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQ 62
E G + P E L+ + E + D EDS + S+S+ ++QRR RT FTS QL+
Sbjct: 297 EGGELSPKEELL--LHPEDAEGKDG-EDSVCLSAGSDSEEGLLKRKQRRYRTTFTSYQLE 353
Query: 63 ELEATFARNRYPDMSTREEIAMWTNLTEA 91
ELE F + YPD+ TREE+AM +LTEA
Sbjct: 354 ELERAFQKTHYPDVFTREELAMRLDLTEA 382
>gi|313220525|emb|CBY31375.1| unnamed protein product [Oikopleura dioica]
Length = 452
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 44/75 (58%), Gaps = 5/75 (6%)
Query: 22 SNHNDSI-----EDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDM 76
SNHN S E+ K+ + ++QRR RT FT++QL+ELE F R YPD+
Sbjct: 170 SNHNSSSPIQEDEECPIKEDELDESGQPVKRKQRRSRTTFTAEQLEELEKCFERTHYPDI 229
Query: 77 STREEIAMWTNLTEA 91
TREE+A T LTEA
Sbjct: 230 YTREELAQRTKLTEA 244
>gi|301620871|ref|XP_002939787.1| PREDICTED: dorsal root ganglia homeobox protein-like [Xenopus
(Silurana) tropicalis]
Length = 263
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 35/45 (77%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT QQL+ LEA FA+ YPD+ TREE+AM NLTEA
Sbjct: 32 RKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEA 76
>gi|449784876|ref|NP_001263380.1| dorsal root ganglia homeobox protein [Homo sapiens]
gi|158513808|sp|A6NNA5.1|DRGX_HUMAN RecName: Full=Dorsal root ganglia homeobox protein; AltName:
Full=Paired-related homeobox protein-like 1
gi|119613506|gb|EAW93100.1| hCG32744 [Homo sapiens]
gi|261861218|dbj|BAI47131.1| dorsal root ganglia homeobox [synthetic construct]
Length = 263
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 35/45 (77%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT QQL+ LEA FA+ YPD+ TREE+AM NLTEA
Sbjct: 31 RKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEA 75
>gi|440910593|gb|ELR60376.1| Homeobox protein ARX [Bos grunniens mutus]
Length = 503
Score = 61.6 bits (148), Expect = 5e-08, Method: Composition-based stats.
Identities = 32/63 (50%), Positives = 42/63 (66%)
Query: 29 EDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNL 88
EDS + S+S+ ++QRR RT FTS QL+ELE F + YPD+ TREE+AM +L
Sbjct: 255 EDSVCLSAGSDSEEGLLKRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRLDL 314
Query: 89 TEA 91
TEA
Sbjct: 315 TEA 317
>gi|344274342|ref|XP_003408976.1| PREDICTED: LOW QUALITY PROTEIN: dorsal root ganglia homeobox
protein-like [Loxodonta africana]
Length = 268
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 35/45 (77%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT QQL+ LEA FA+ YPD+ TREE+AM NLTEA
Sbjct: 36 RKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEA 80
>gi|190337325|gb|AAI62791.1| Dorsal root ganglia homeobox [Danio rerio]
gi|190340175|gb|AAI62787.1| Dorsal root ganglia homeobox [Danio rerio]
Length = 287
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 35/45 (77%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT QQL+ LEA FA+ YPD+ TREE+AM NLTEA
Sbjct: 40 RKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEA 84
>gi|403276711|ref|XP_003930032.1| PREDICTED: dorsal root ganglia homeobox protein [Saimiri
boliviensis boliviensis]
Length = 268
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 35/45 (77%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT QQL+ LEA FA+ YPD+ TREE+AM NLTEA
Sbjct: 36 RKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEA 80
>gi|363735465|ref|XP_001234656.2| PREDICTED: dorsal root ganglia homeobox protein [Gallus gallus]
Length = 260
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 35/45 (77%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT QQL+ LEA FA+ YPD+ TREE+AM NLTEA
Sbjct: 31 RKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEA 75
>gi|317373355|sp|Q8BYH0.2|DRGX_MOUSE RecName: Full=Dorsal root ganglia homeobox protein; AltName:
Full=Dorsal root ganglion 11; AltName: Full=Homeobox
protein DRG11; AltName: Full=Paired-related homeobox
protein-like 1
gi|188036459|gb|ACD45984.1| paired related homeobox protein-like 1 [Mus musculus]
Length = 263
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 35/45 (77%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT QQL+ LEA FA+ YPD+ TREE+AM NLTEA
Sbjct: 31 RKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEA 75
>gi|402909744|ref|XP_003917569.1| PREDICTED: homeobox protein ARX [Papio anubis]
Length = 424
Score = 61.6 bits (148), Expect = 6e-08, Method: Composition-based stats.
Identities = 39/89 (43%), Positives = 53/89 (59%), Gaps = 3/89 (3%)
Query: 3 ERGRILPIEPLIGNIKTELSNHNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQ 62
E G + P E L+ + E + D EDS + S+S+ ++QRR RT FTS QL+
Sbjct: 147 EGGELSPKEELL--LHPEDAEGKDG-EDSVCLSAGSDSEEGLLKRKQRRYRTTFTSYQLE 203
Query: 63 ELEATFARNRYPDMSTREEIAMWTNLTEA 91
ELE F + YPD+ TREE+AM +LTEA
Sbjct: 204 ELERAFQKTHYPDVFTREELAMRLDLTEA 232
>gi|115678906|ref|XP_001199761.1| PREDICTED: uncharacterized protein LOC763703 [Strongylocentrotus
purpuratus]
Length = 477
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 38/55 (69%)
Query: 37 SSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
SN+ + ++QRR RT FTS QL+ELE F + YPD+ TREE+AM +LTEA
Sbjct: 172 GSNAGDRPTKRKQRRYRTTFTSYQLEELERAFCKTHYPDVFTREELAMRVDLTEA 226
>gi|440902039|gb|ELR52885.1| Dorsal root ganglia homeobox protein, partial [Bos grunniens
mutus]
Length = 257
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 35/45 (77%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT QQL+ LEA FA+ YPD+ TREE+AM NLTEA
Sbjct: 25 RKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEA 69
>gi|341883114|gb|EGT39049.1| CBN-CEH-17 protein [Caenorhabditis brenneri]
Length = 231
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/84 (48%), Positives = 49/84 (58%), Gaps = 5/84 (5%)
Query: 13 LIGN--IKTELSNHNDSIEDSS---AKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEAT 67
LIGN I+ SN + + SS A SS N ++QRR RT FTS QL+ELE
Sbjct: 106 LIGNEAIQRTSSNVLNGLPRSSLVGALCSSGAPLNPAERRKQRRIRTTFTSGQLKELERA 165
Query: 68 FARNRYPDMSTREEIAMWTNLTEA 91
F YPD+ TREEIAM +LTEA
Sbjct: 166 FCETHYPDIYTREEIAMRIDLTEA 189
>gi|194759514|ref|XP_001961992.1| GF15246 [Drosophila ananassae]
gi|190615689|gb|EDV31213.1| GF15246 [Drosophila ananassae]
Length = 589
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 35/45 (77%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT QQL+ELE FA+ YPD+ TRE++AM NLTEA
Sbjct: 50 RKQRRNRTTFTLQQLEELETAFAQTHYPDVFTREDLAMKINLTEA 94
>gi|406719566|dbj|BAM45082.1| dorsal root ganglia homeobox, partial [Pelodiscus sinensis]
Length = 199
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 35/45 (77%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT QQL+ LEA FA+ YPD+ TREE+AM NLTEA
Sbjct: 22 RKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEA 66
>gi|301783499|ref|XP_002927160.1| PREDICTED: dorsal root ganglia homeobox protein-like [Ailuropoda
melanoleuca]
Length = 263
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 35/45 (77%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT QQL+ LEA FA+ YPD+ TREE+AM NLTEA
Sbjct: 31 RKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEA 75
>gi|291407255|ref|XP_002720021.1| PREDICTED: aristaless related homeobox [Oryctolagus cuniculus]
Length = 454
Score = 61.6 bits (148), Expect = 6e-08, Method: Composition-based stats.
Identities = 39/89 (43%), Positives = 53/89 (59%), Gaps = 3/89 (3%)
Query: 3 ERGRILPIEPLIGNIKTELSNHNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQ 62
E G + P E L+ + E + D EDS + S+S+ ++QRR RT FTS QL+
Sbjct: 177 EGGELSPKEELL--LHPEDTEGKDG-EDSVCLSAGSDSEEGLLKRKQRRYRTTFTSYQLE 233
Query: 63 ELEATFARNRYPDMSTREEIAMWTNLTEA 91
ELE F + YPD+ TREE+AM +LTEA
Sbjct: 234 ELERAFQKTHYPDVFTREELAMRLDLTEA 262
>gi|297491619|ref|XP_002699015.1| PREDICTED: dorsal root ganglia homeobox protein [Bos taurus]
gi|296472028|tpg|DAA14143.1| TPA: paired related homeobox protein-like 1-like [Bos taurus]
Length = 263
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 35/45 (77%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT QQL+ LEA FA+ YPD+ TREE+AM NLTEA
Sbjct: 31 RKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEA 75
>gi|26024213|ref|NP_031518.2| homeobox protein ARX [Mus musculus]
gi|27923957|sp|O35085.3|ARX_MOUSE RecName: Full=Homeobox protein ARX; AltName:
Full=Aristaless-related homeobox
gi|22163970|dbj|BAA28284.2| Arx homeoprotein [Mus musculus]
gi|30354717|gb|AAH52033.1| Aristaless related homeobox [Mus musculus]
Length = 564
Score = 61.6 bits (148), Expect = 6e-08, Method: Composition-based stats.
Identities = 39/89 (43%), Positives = 53/89 (59%), Gaps = 3/89 (3%)
Query: 3 ERGRILPIEPLIGNIKTELSNHNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQ 62
E G + P E L+ + E + D EDS + S+S+ ++QRR RT FTS QL+
Sbjct: 287 EGGELSPKEELL--LHPEDAEGKDG-EDSVCLSAGSDSEEGLLKRKQRRYRTTFTSYQLE 343
Query: 63 ELEATFARNRYPDMSTREEIAMWTNLTEA 91
ELE F + YPD+ TREE+AM +LTEA
Sbjct: 344 ELERAFQKTHYPDVFTREELAMRLDLTEA 372
>gi|281346213|gb|EFB21797.1| hypothetical protein PANDA_016919 [Ailuropoda melanoleuca]
Length = 252
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 35/45 (77%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT QQL+ LEA FA+ YPD+ TREE+AM NLTEA
Sbjct: 20 RKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEA 64
>gi|354465789|ref|XP_003495359.1| PREDICTED: dorsal root ganglia homeobox protein-like [Cricetulus
griseus]
Length = 263
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 35/45 (77%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT QQL+ LEA FA+ YPD+ TREE+AM NLTEA
Sbjct: 31 RKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEA 75
>gi|171544937|ref|NP_001116385.1| aristaless-related homeobox protein [Oryzias latipes]
gi|157410507|gb|ABV53977.1| aristaless-related homeobox protein [Oryzias latipes]
Length = 464
Score = 61.6 bits (148), Expect = 6e-08, Method: Composition-based stats.
Identities = 32/63 (50%), Positives = 42/63 (66%)
Query: 29 EDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNL 88
EDS + S+S+ ++QRR RT FTS QL+ELE F + YPD+ TREE+AM +L
Sbjct: 202 EDSVCLSAGSDSEEGMLKRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRLDL 261
Query: 89 TEA 91
TEA
Sbjct: 262 TEA 264
>gi|449279931|gb|EMC87364.1| Dorsal root ganglia homeobox protein [Columba livia]
Length = 261
Score = 61.2 bits (147), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 35/45 (77%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT QQL+ LEA FA+ YPD+ TREE+AM NLTEA
Sbjct: 31 RKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEA 75
>gi|270008150|gb|EFA04598.1| aristaless [Tribolium castaneum]
Length = 182
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 62/119 (52%), Gaps = 23/119 (19%)
Query: 6 RILPIEPLIGNIKTELSNHNDSIEDSSA-------KDSSSNSKNTKN----SKRQRRQRT 54
RI+P EP+ + E+ ++ + ++ D+S S + ++QRR RT
Sbjct: 13 RIIP-EPVASDRNPEVMGVSEEVTPNAGVEPRPPGPDNSDGSDPEPDEFAPKRKQRRYRT 71
Query: 55 HFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEAL----------RETHAYSYNFL 103
FTS QL+ELE F+R YPD+ TREE+AM LTEA RE+HA Y FL
Sbjct: 72 TFTSYQLEELEKAFSRTHYPDVFTREELAMKIGLTEARIQVGVVKTAGRESHA-RYAFL 129
>gi|270012821|gb|EFA09269.1| gooseberry [Tribolium castaneum]
Length = 406
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 49/85 (57%), Gaps = 6/85 (7%)
Query: 13 LIGNIKTELSNHNDSIEDSSAKDSSSNSKNTKN------SKRQRRQRTHFTSQQLQELEA 66
L G K + N SIE +SS + +T++ ++QRR RT FT +QL+ LE
Sbjct: 142 LRGGRKEDPDRKNHSIEGILGPNSSCDESDTESEPGIPLKRKQRRSRTTFTGEQLEALER 201
Query: 67 TFARNRYPDMSTREEIAMWTNLTEA 91
F R +YPD+ TREE+A T LTEA
Sbjct: 202 AFGRTQYPDVYTREELAQKTKLTEA 226
>gi|410919965|ref|XP_003973454.1| PREDICTED: paired box protein Pax-7-like [Takifugu rubripes]
Length = 447
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 46/76 (60%), Gaps = 3/76 (3%)
Query: 16 NIKTELSNHNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPD 75
+I L + + I+D S DS + ++QRR RT FT++QL+ELE F R YPD
Sbjct: 185 SIDGILGDKCNRIDDGSDVDSE---PDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPD 241
Query: 76 MSTREEIAMWTNLTEA 91
+ TREE+A T LTEA
Sbjct: 242 IYTREELAQRTKLTEA 257
>gi|126272861|ref|XP_001366013.1| PREDICTED: dorsal root ganglia homeobox protein-like [Monodelphis
domestica]
Length = 260
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 35/45 (77%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT QQL+ LEA FA+ YPD+ TREE+AM NLTEA
Sbjct: 31 RKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEA 75
>gi|268564155|ref|XP_002639030.1| C. briggsae CBR-CEH-17 protein [Caenorhabditis briggsae]
Length = 234
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/84 (48%), Positives = 50/84 (59%), Gaps = 5/84 (5%)
Query: 13 LIGN--IKTELSNHNDSIEDSS---AKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEAT 67
LIGN I+ SN + I+ +S A SS N ++QRR RT FTS QL+ELE
Sbjct: 106 LIGNETIQRTSSNVLNGIQRNSLVGALCSSGPPLNPAERRKQRRIRTTFTSGQLKELERA 165
Query: 68 FARNRYPDMSTREEIAMWTNLTEA 91
F YPD+ TREEIAM +LTEA
Sbjct: 166 FCETHYPDIYTREEIAMRIDLTEA 189
>gi|311271509|ref|XP_003133155.1| PREDICTED: LOW QUALITY PROTEIN: dorsal root ganglia homeobox
protein-like [Sus scrofa]
Length = 263
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 35/45 (77%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT QQL+ LEA FA+ YPD+ TREE+AM NLTEA
Sbjct: 31 RKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEA 75
>gi|149034141|gb|EDL88911.1| paired related homeobox protein-like 1, isoform CRA_a [Rattus
norvegicus]
Length = 253
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 35/45 (77%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT QQL+ LEA FA+ YPD+ TREE+AM NLTEA
Sbjct: 31 RKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEA 75
>gi|326923683|ref|XP_003208064.1| PREDICTED: dorsal root ganglia homeobox protein-like [Meleagris
gallopavo]
Length = 299
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 35/45 (77%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT QQL+ LEA FA+ YPD+ TREE+AM NLTEA
Sbjct: 70 RKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEA 114
>gi|41581185|emb|CAF02092.1| paired box protein 7 [Salmo salar]
Length = 501
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 35/45 (77%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT++QL+ELE F R RYPD+ TREE+A T LTEA
Sbjct: 214 RKQRRSRTTFTAEQLEELEKAFERTRYPDIYTREELAQRTKLTEA 258
>gi|395501652|ref|XP_003755205.1| PREDICTED: dorsal root ganglia homeobox protein [Sarcophilus
harrisii]
Length = 260
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 35/45 (77%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT QQL+ LEA FA+ YPD+ TREE+AM NLTEA
Sbjct: 31 RKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEA 75
>gi|259013476|ref|NP_001158481.1| dorsal root ganglia homeobox [Saccoglossus kowalevskii]
gi|197734655|gb|ACH73223.1| dorsal root ganglion homeobox protein [Saccoglossus kowalevskii]
Length = 328
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 36/45 (80%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT+QQL+ELE+ F R YPD+ TRE++A+ NLTEA
Sbjct: 54 RKQRRNRTTFTAQQLEELESAFGRTHYPDVFTREDLAVKINLTEA 98
>gi|383857829|ref|XP_003704406.1| PREDICTED: uncharacterized protein LOC100876054 [Megachile
rotundata]
Length = 503
Score = 61.2 bits (147), Expect = 7e-08, Method: Composition-based stats.
Identities = 28/45 (62%), Positives = 36/45 (80%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT QQL+ELE+ FA+ YPD+ TRE++AM NLTEA
Sbjct: 174 RKQRRNRTTFTLQQLEELESAFAQTHYPDVFTREDLAMKINLTEA 218
>gi|443734928|gb|ELU18784.1| hypothetical protein CAPTEDRAFT_147353, partial [Capitella
teleta]
Length = 116
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 47/86 (54%), Gaps = 12/86 (13%)
Query: 6 RILPIEPLIGNIKTELSNHNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELE 65
+ L I T S H + +D+ A+ ++QRR RT FT QQL+ELE
Sbjct: 19 KFLLIFDCFSCADTAYSLHQELQDDAFAR------------RKQRRNRTTFTLQQLEELE 66
Query: 66 ATFARNRYPDMSTREEIAMWTNLTEA 91
FA+ YPD+ TREE+AM NLTEA
Sbjct: 67 KAFAQTHYPDVFTREELAMRINLTEA 92
>gi|410908863|ref|XP_003967910.1| PREDICTED: aristaless-related homeobox protein-like [Takifugu
rubripes]
Length = 463
Score = 61.2 bits (147), Expect = 7e-08, Method: Composition-based stats.
Identities = 31/63 (49%), Positives = 42/63 (66%)
Query: 29 EDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNL 88
EDS + S+++ ++QRR RT FTS QL+ELE F + YPD+ TREE+AM +L
Sbjct: 201 EDSVCLSAGSDTEEGMLKRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRLDL 260
Query: 89 TEA 91
TEA
Sbjct: 261 TEA 263
>gi|195117252|ref|XP_002003163.1| GI23866 [Drosophila mojavensis]
gi|193913738|gb|EDW12605.1| GI23866 [Drosophila mojavensis]
Length = 623
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 35/45 (77%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT QQL+ELE FA+ YPD+ TRE++AM NLTEA
Sbjct: 67 RKQRRNRTTFTLQQLEELETAFAQTHYPDVFTREDLAMKINLTEA 111
>gi|148692895|gb|EDL24842.1| paired related homeobox protein-like 1 [Mus musculus]
Length = 295
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 35/45 (77%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT QQL+ LEA FA+ YPD+ TREE+AM NLTEA
Sbjct: 73 RKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEA 117
>gi|431901319|gb|ELK08346.1| Dorsal root ganglia homeobox protein [Pteropus alecto]
Length = 381
Score = 60.8 bits (146), Expect = 9e-08, Method: Composition-based stats.
Identities = 29/45 (64%), Positives = 35/45 (77%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT QQL+ LEA FA+ YPD+ TREE+AM NLTEA
Sbjct: 35 RKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEA 79
>gi|426222842|ref|XP_004005591.1| PREDICTED: paired box protein Pax-7 [Ovis aries]
Length = 805
Score = 60.8 bits (146), Expect = 9e-08, Method: Composition-based stats.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT++QL+ELE F R YPD+ TREE+A T LTEA
Sbjct: 523 RKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEA 567
>gi|47228865|emb|CAG09380.1| unnamed protein product [Tetraodon nigroviridis]
Length = 268
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 35/45 (77%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT QQL+ LEA FA+ YPD+ TREE+AM NLTEA
Sbjct: 24 RKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEA 68
>gi|335305801|ref|XP_003360298.1| PREDICTED: homeobox protein ARX-like [Sus scrofa]
Length = 380
Score = 60.8 bits (146), Expect = 9e-08, Method: Composition-based stats.
Identities = 39/89 (43%), Positives = 53/89 (59%), Gaps = 3/89 (3%)
Query: 3 ERGRILPIEPLIGNIKTELSNHNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQ 62
E G + P E L+ + E + D EDS + S+S+ ++QRR RT FTS QL+
Sbjct: 103 EGGELSPKEELL--LHPEDAEGKDG-EDSVCLSAGSDSEEGLLKRKQRRYRTTFTSYQLE 159
Query: 63 ELEATFARNRYPDMSTREEIAMWTNLTEA 91
ELE F + YPD+ TREE+AM +LTEA
Sbjct: 160 ELERAFQKTHYPDVFTREELAMRLDLTEA 188
>gi|308497829|ref|XP_003111101.1| CRE-CEH-17 protein [Caenorhabditis remanei]
gi|308240649|gb|EFO84601.1| CRE-CEH-17 protein [Caenorhabditis remanei]
Length = 231
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 51/84 (60%), Gaps = 5/84 (5%)
Query: 13 LIGNIKTELSNHN--DSIEDSS---AKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEAT 67
LIGN + +++N + I+ +S A SS N ++QRR RT FTS QL+ELE
Sbjct: 106 LIGNETIQRTSNNVLNGIQRNSLVGALCSSGAPLNPAERRKQRRIRTTFTSGQLKELERA 165
Query: 68 FARNRYPDMSTREEIAMWTNLTEA 91
F YPD+ TREEIAM +LTEA
Sbjct: 166 FCETHYPDIYTREEIAMRIDLTEA 189
>gi|321474441|gb|EFX85406.1| hypothetical protein DAPPUDRAFT_45999 [Daphnia pulex]
Length = 250
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
Query: 23 NHNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEI 82
HND D+ + ++QRR RT FT+QQ+ ELE F R +YPD+ TREE+
Sbjct: 160 GHNDM--DAGTGSDCDSEPGLSLKQKQRRHRTTFTAQQMDELEKAFDRTQYPDVYTREEL 217
Query: 83 AMWTNLTEA 91
A T LTEA
Sbjct: 218 AQRTKLTEA 226
>gi|320544499|ref|NP_001097075.2| CG34340 [Drosophila melanogaster]
gi|116875717|gb|ABK30908.1| IP09201p [Drosophila melanogaster]
gi|318068302|gb|ABV53614.2| CG34340 [Drosophila melanogaster]
Length = 587
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 35/45 (77%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT QQL+ELE FA+ YPD+ TRE++AM NLTEA
Sbjct: 50 RKQRRNRTTFTLQQLEELETAFAQTHYPDVFTREDLAMKINLTEA 94
>gi|340709231|ref|XP_003393215.1| PREDICTED: homeobox protein aristaless-like [Bombus terrestris]
Length = 280
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 44/72 (61%), Gaps = 2/72 (2%)
Query: 20 ELSNHNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTR 79
E SNH + S +S + + ++QRR RT FTS QL+ELE F+R YPD+ TR
Sbjct: 12 EESNHPRAAPTS--PESETEVDDFAPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTR 69
Query: 80 EEIAMWTNLTEA 91
EE+AM LTEA
Sbjct: 70 EELAMKIGLTEA 81
>gi|18202522|sp|Q26657.2|ALX_STRPU RecName: Full=Aristaless homeobox protein; Short=ALX; AltName:
Full=SpPrx-1
gi|2055317|dbj|BAA19774.1| homeobox [Strongylocentrotus purpuratus]
Length = 327
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 38/55 (69%)
Query: 37 SSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
SN+ + ++QRR RT FTS QL+ELE F + YPD+ TREE+AM +LTEA
Sbjct: 200 GSNAGDRPTKRKQRRYRTTFTSYQLEELERAFCKTHYPDVFTREELAMRVDLTEA 254
>gi|390361068|ref|XP_003729834.1| PREDICTED: dorsal root ganglia homeobox protein-like
[Strongylocentrotus purpuratus]
Length = 347
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 36/45 (80%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT QQL+ELE+ FA+ YPD+ TRE++A+ NLTEA
Sbjct: 52 RKQRRNRTTFTVQQLEELESAFAKTHYPDVFTREDLALRINLTEA 96
>gi|340723862|ref|XP_003400306.1| PREDICTED: hypothetical protein LOC100648767 [Bombus terrestris]
Length = 571
Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 28/45 (62%), Positives = 36/45 (80%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT QQL+ELE+ FA+ YPD+ TRE++AM NLTEA
Sbjct: 235 RKQRRNRTTFTLQQLEELESAFAQTHYPDVFTREDLAMKINLTEA 279
>gi|158289998|ref|XP_311581.3| AGAP010359-PA [Anopheles gambiae str. PEST]
gi|157018428|gb|EAA07188.4| AGAP010359-PA [Anopheles gambiae str. PEST]
Length = 172
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 35/45 (77%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FTS+QL+ LE F R +YPD+ TREE+A TNLTEA
Sbjct: 123 RKQRRSRTTFTSEQLEALEKAFTRTQYPDVYTREELASTTNLTEA 167
>gi|219518636|gb|AAI71926.1| Prrxl1 protein [Mus musculus]
Length = 180
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 35/45 (77%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT QQL+ LEA FA+ YPD+ TREE+AM NLTEA
Sbjct: 31 RKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEA 75
>gi|242009008|ref|XP_002425285.1| homeobox protein arx, putative [Pediculus humanus corporis]
gi|212509050|gb|EEB12547.1| homeobox protein arx, putative [Pediculus humanus corporis]
Length = 513
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 35/45 (77%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT QQL+ELE FA+ YPD+ TRE++AM NLTEA
Sbjct: 48 RKQRRNRTTFTLQQLEELETAFAQTHYPDVFTREDLAMKINLTEA 92
>gi|49169835|ref|NP_001001796.1| dorsal root ganglia homeobox protein [Mus musculus]
gi|26333375|dbj|BAC30405.1| unnamed protein product [Mus musculus]
gi|124376814|gb|AAI32614.1| Paired related homeobox protein-like 1 [Mus musculus]
gi|148877678|gb|AAI45918.1| Paired related homeobox protein-like 1 [Mus musculus]
gi|188036461|gb|ACD45985.1| paired related homeobox protein-like 1b [Mus musculus]
Length = 220
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 35/45 (77%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT QQL+ LEA FA+ YPD+ TREE+AM NLTEA
Sbjct: 31 RKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEA 75
>gi|260796221|ref|XP_002593103.1| Q50 paired-like homeodomain transcription factor [Branchiostoma
floridae]
gi|229278327|gb|EEN49114.1| Q50 paired-like homeodomain transcription factor [Branchiostoma
floridae]
Length = 383
Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 28/45 (62%), Positives = 35/45 (77%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FTS QL+ELE FA+ YPD+ TREE+AM +LTEA
Sbjct: 177 RKQRRYRTTFTSYQLEELERAFAKTHYPDVFTREELAMRVDLTEA 221
>gi|383865116|ref|XP_003708021.1| PREDICTED: homeobox protein aristaless-like [Megachile rotundata]
Length = 261
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 44/72 (61%), Gaps = 2/72 (2%)
Query: 20 ELSNHNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTR 79
E SNH + S +S + + ++QRR RT FTS QL+ELE F+R YPD+ TR
Sbjct: 13 EESNHPRAAPTSP--ESEAEVDDFAPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTR 70
Query: 80 EEIAMWTNLTEA 91
EE+AM LTEA
Sbjct: 71 EELAMKIGLTEA 82
>gi|350425133|ref|XP_003494022.1| PREDICTED: homeobox protein ARX-like [Bombus impatiens]
Length = 385
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 44/72 (61%), Gaps = 2/72 (2%)
Query: 20 ELSNHNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTR 79
E SNH + S +S + + ++QRR RT FTS QL+ELE F+R YPD+ TR
Sbjct: 130 EESNHPRAAPTS--PESETEVDDFAPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTR 187
Query: 80 EEIAMWTNLTEA 91
EE+AM LTEA
Sbjct: 188 EELAMKIGLTEA 199
>gi|345327987|ref|XP_001508209.2| PREDICTED: dorsal root ganglia homeobox protein-like, partial
[Ornithorhynchus anatinus]
Length = 173
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 35/45 (77%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT QQL+ LEA FA+ YPD+ TREE+AM NLTEA
Sbjct: 31 RKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEA 75
>gi|189240302|ref|XP_001813949.1| PREDICTED: similar to CG34340 CG34340-PD [Tribolium castaneum]
Length = 283
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 43/67 (64%)
Query: 25 NDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAM 84
S D+S + +T ++QRR RT FT QQL+ELE+ FA+ YPD+ TRE++AM
Sbjct: 45 GGSCADTSYSYHPAIHDDTFVRRKQRRNRTTFTLQQLEELESAFAQTHYPDVFTREDLAM 104
Query: 85 WTNLTEA 91
NLTEA
Sbjct: 105 KINLTEA 111
>gi|56714085|gb|AAW24013.1| homeodomain protein Pax37a, partial [Oikopleura dioica]
Length = 440
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 48/77 (62%), Gaps = 12/77 (15%)
Query: 17 IKTEL--SNHNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYP 74
IK EL +NH D +++S + K ++QRR RT FT++QL+ELE F R YP
Sbjct: 166 IKEELDHNNHEDELDESV--------RPVK--RKQRRSRTTFTAEQLEELEKCFERTHYP 215
Query: 75 DMSTREEIAMWTNLTEA 91
D+ TREE+A T LTEA
Sbjct: 216 DIYTREELAQRTKLTEA 232
>gi|242008553|ref|XP_002425067.1| homeobox protein arx, putative [Pediculus humanus corporis]
gi|212508732|gb|EEB12329.1| homeobox protein arx, putative [Pediculus humanus corporis]
Length = 181
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 48/85 (56%), Gaps = 13/85 (15%)
Query: 20 ELSNHNDSIEDSSAKDS-------------SSNSKNTKNSKRQRRQRTHFTSQQLQELEA 66
E +N ND+I+DS D+ S NS+ + ++QRR RT F++ QL ELE
Sbjct: 45 EFTNCNDTIDDSQVSDTKEDVLQEVERGNLSRNSRTSGIKRKQRRYRTTFSNYQLDELER 104
Query: 67 TFARNRYPDMSTREEIAMWTNLTEA 91
F YPD+ REE+A+ +LTEA
Sbjct: 105 AFRETHYPDVFFREELALRIDLTEA 129
>gi|291230672|ref|XP_002735289.1| PREDICTED: dorsal root ganglia homeobox-like [Saccoglossus
kowalevskii]
Length = 310
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 35/45 (77%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT QQL+ELE FA+ YPD+ TRE++AM NLTEA
Sbjct: 47 RKQRRNRTTFTLQQLEELENAFAKTHYPDVFTREDLAMKINLTEA 91
>gi|402594071|gb|EJW87998.1| hypothetical protein WUBG_01089, partial [Wuchereria bancrofti]
Length = 286
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 46/76 (60%), Gaps = 2/76 (2%)
Query: 16 NIKTELSNHNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPD 75
++K +SN ++ D + S SNS ++QRR RT F++ QL ELE FAR YPD
Sbjct: 158 SMKPSVSNDFSAVSDRPS--SCSNSPEDNGKRKQRRYRTTFSAYQLDELEKVFARTHYPD 215
Query: 76 MSTREEIAMWTNLTEA 91
+ TREE+A LTEA
Sbjct: 216 VFTREELAQRVILTEA 231
>gi|254733060|gb|ACT79975.1| paired [Nasonia vitripennis]
Length = 213
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 48/82 (58%), Gaps = 2/82 (2%)
Query: 10 IEPLIGNIKTELSNHNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFA 69
I LI + E + ND + SS D S + ++QRR RT FT+QQL ELE F
Sbjct: 119 ISRLIRDRDPEDAKLNDG-KASSGSDCESEP-GIQLKRKQRRSRTTFTAQQLDELERAFE 176
Query: 70 RNRYPDMSTREEIAMWTNLTEA 91
R +YPD+ TREE+A T LTEA
Sbjct: 177 RTQYPDIYTREELAQRTKLTEA 198
>gi|281485132|gb|ADA70356.1| paired-like family homeodomain transcription factor [Heliconius
erato]
Length = 265
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Query: 20 ELSNHNDSIEDSSAKDSSSNSKNT---KNSKRQRRQRTHFTSQQLQELEATFARNRYPDM 76
ELS+ + S S++S + ++QRR RT FTS QL+ELE F+R YPD+
Sbjct: 17 ELSHADQSPASERPPPGSADSDDADEFAPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDV 76
Query: 77 STREEIAMWTNLTEA 91
TREE+AM LTEA
Sbjct: 77 FTREELAMKIGLTEA 91
>gi|258504658|gb|ACV72957.1| CEH-17 [Caenorhabditis remanei]
gi|258504660|gb|ACV72958.1| CEH-17 [Caenorhabditis remanei]
gi|258504662|gb|ACV72959.1| CEH-17 [Caenorhabditis remanei]
gi|258504666|gb|ACV72961.1| CEH-17 [Caenorhabditis remanei]
gi|258504668|gb|ACV72962.1| CEH-17 [Caenorhabditis remanei]
gi|258504670|gb|ACV72963.1| CEH-17 [Caenorhabditis remanei]
gi|258504672|gb|ACV72964.1| CEH-17 [Caenorhabditis remanei]
gi|258504674|gb|ACV72965.1| CEH-17 [Caenorhabditis remanei]
gi|258504676|gb|ACV72966.1| CEH-17 [Caenorhabditis remanei]
gi|258504678|gb|ACV72967.1| CEH-17 [Caenorhabditis remanei]
gi|258504680|gb|ACV72968.1| CEH-17 [Caenorhabditis remanei]
gi|258504684|gb|ACV72970.1| CEH-17 [Caenorhabditis remanei]
gi|258504686|gb|ACV72971.1| CEH-17 [Caenorhabditis remanei]
Length = 208
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 51/84 (60%), Gaps = 5/84 (5%)
Query: 13 LIGNIKTELSNHN--DSIEDSS---AKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEAT 67
LIGN + +++N + I+ +S A SS N ++QRR RT FTS QL+ELE
Sbjct: 99 LIGNETIQRTSNNVLNGIQRNSLVGALCSSGAPLNPAERRKQRRIRTTFTSGQLKELERA 158
Query: 68 FARNRYPDMSTREEIAMWTNLTEA 91
F YPD+ TREEIAM +LTEA
Sbjct: 159 FCETHYPDIYTREEIAMRIDLTEA 182
>gi|328785265|ref|XP_001119852.2| PREDICTED: hypothetical protein LOC724120 [Apis mellifera]
Length = 523
Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 28/45 (62%), Positives = 36/45 (80%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT QQL+ELE+ FA+ YPD+ TRE++AM NLTEA
Sbjct: 187 RKQRRNRTTFTLQQLEELESAFAQTHYPDVFTREDLAMKINLTEA 231
>gi|405951906|gb|EKC19775.1| Dorsal root ganglia homeobox protein [Crassostrea gigas]
Length = 492
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 35/45 (77%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT QQL+ELE FA+ YPD+ TRE++AM NLTEA
Sbjct: 96 RKQRRNRTTFTLQQLEELEKAFAQTHYPDVFTREDLAMRINLTEA 140
>gi|341903512|gb|EGT59447.1| hypothetical protein CAEBREN_29597 [Caenorhabditis brenneri]
Length = 365
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 26 DSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMW 85
DS E+ S D + NS + ++QRR RT F++ QL ELE FAR YPD+ TREE+A
Sbjct: 95 DSRENGSPSDGT-NSPDENGKRKQRRYRTTFSAFQLDELEKVFARTHYPDVFTREELATR 153
Query: 86 TNLTEA 91
LTEA
Sbjct: 154 VQLTEA 159
>gi|258504656|gb|ACV72956.1| CEH-17 [Caenorhabditis remanei]
gi|258504664|gb|ACV72960.1| CEH-17 [Caenorhabditis remanei]
gi|258504682|gb|ACV72969.1| CEH-17 [Caenorhabditis remanei]
Length = 208
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 51/84 (60%), Gaps = 5/84 (5%)
Query: 13 LIGNIKTELSNHN--DSIEDSS---AKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEAT 67
LIGN + +++N + I+ +S A SS N ++QRR RT FTS QL+ELE
Sbjct: 99 LIGNETIQRTSNNVLNGIQRNSLVGALCSSGAPLNPAERRKQRRIRTTFTSGQLKELERA 158
Query: 68 FARNRYPDMSTREEIAMWTNLTEA 91
F YPD+ TREEIAM +LTEA
Sbjct: 159 FCETHYPDIYTREEIAMRIDLTEA 182
>gi|440808052|gb|AGC24169.1| Phox2 [Sepia officinalis]
Length = 336
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FTS QL+ELE FA YPD+ TREEIAM +LTEA
Sbjct: 130 RKQRRIRTTFTSAQLKELEKAFAETHYPDIYTREEIAMKIDLTEA 174
>gi|115702398|ref|XP_785238.2| PREDICTED: homeobox protein aristaless-like 4-like
[Strongylocentrotus purpuratus]
Length = 353
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Query: 9 PIEPLIGNIKTELSNHNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATF 68
PI G +K E+S+H + + S + N K +++RR RT FTS QL+E+E F
Sbjct: 70 PIASSPGTVKAEISDHGS--PEGALNGSLGDDANAK--RKKRRNRTTFTSFQLEEMEKVF 125
Query: 69 ARNRYPDMSTREEIAMWTNLTEA 91
+ YPD+ RE++A+ +LTEA
Sbjct: 126 QKTHYPDVYCREQLALRCDLTEA 148
>gi|406719564|dbj|BAM45081.1| dorsal root ganglia homeobox, partial [Gallus gallus]
Length = 156
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 35/45 (77%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT QQL+ LEA FA+ YPD+ TREE+AM NLTEA
Sbjct: 23 RKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEA 67
>gi|328792237|ref|XP_624630.3| PREDICTED: homeobox protein aristaless-like isoform 2 [Apis
mellifera]
Length = 259
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 44/72 (61%), Gaps = 2/72 (2%)
Query: 20 ELSNHNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTR 79
E SNH + S +S + + ++QRR RT FTS QL+ELE F+R YPD+ TR
Sbjct: 12 EESNHPRAAPTSP--ESETEVDDFAPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTR 69
Query: 80 EEIAMWTNLTEA 91
EE+AM LTEA
Sbjct: 70 EELAMKIGLTEA 81
>gi|195147252|ref|XP_002014594.1| GL18872 [Drosophila persimilis]
gi|194106547|gb|EDW28590.1| GL18872 [Drosophila persimilis]
Length = 397
Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 41/67 (61%), Gaps = 3/67 (4%)
Query: 25 NDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAM 84
N I D+ +S + ++QRR RT FTS QL+ELE F+R YPD+ TREE+AM
Sbjct: 62 NSPISDA---NSDCEADEYAPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAM 118
Query: 85 WTNLTEA 91
LTEA
Sbjct: 119 KIGLTEA 125
>gi|125985361|ref|XP_001356444.1| GA17785 [Drosophila pseudoobscura pseudoobscura]
gi|54644768|gb|EAL33508.1| GA17785 [Drosophila pseudoobscura pseudoobscura]
Length = 395
Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 41/67 (61%), Gaps = 3/67 (4%)
Query: 25 NDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAM 84
N I D+ +S + ++QRR RT FTS QL+ELE F+R YPD+ TREE+AM
Sbjct: 62 NSPISDA---NSDCEADEYAPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAM 118
Query: 85 WTNLTEA 91
LTEA
Sbjct: 119 KIGLTEA 125
>gi|194766533|ref|XP_001965379.1| GF20646 [Drosophila ananassae]
gi|190617989|gb|EDV33513.1| GF20646 [Drosophila ananassae]
Length = 405
Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 40/67 (59%), Gaps = 3/67 (4%)
Query: 25 NDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAM 84
N I D +S + ++QRR RT FTS QL+ELE F+R YPD+ TREE+AM
Sbjct: 61 NSPISDG---NSDGEADEYAPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAM 117
Query: 85 WTNLTEA 91
LTEA
Sbjct: 118 KIGLTEA 124
>gi|270011563|gb|EFA08011.1| hypothetical protein TcasGA2_TC005600 [Tribolium castaneum]
Length = 327
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 36/45 (80%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT QQL+ELE+ FA+ YPD+ TRE++AM NLTEA
Sbjct: 49 RKQRRNRTTFTLQQLEELESAFAQTHYPDVFTREDLAMKINLTEA 93
>gi|380021433|ref|XP_003694570.1| PREDICTED: uncharacterized protein LOC100865467 [Apis florea]
Length = 386
Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/45 (62%), Positives = 36/45 (80%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT QQL+ELE+ FA+ YPD+ TRE++AM NLTEA
Sbjct: 50 RKQRRNRTTFTLQQLEELESAFAQTHYPDVFTREDLAMKINLTEA 94
>gi|357614288|gb|EHJ69004.1| paired-like family homeodomain transcription factor [Danaus
plexippus]
Length = 341
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 45/74 (60%), Gaps = 2/74 (2%)
Query: 20 ELSNHNDSIEDSSAKDS--SSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMS 77
ELS ++ S + S S + + ++QRR RT FTS QL+ELE F+R YPD+
Sbjct: 95 ELSRNDQSPSERPPPGSADSDDPDDFAPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVF 154
Query: 78 TREEIAMWTNLTEA 91
TREE+AM LTEA
Sbjct: 155 TREELAMKIGLTEA 168
>gi|167234447|ref|NP_001107838.1| aristaless [Tribolium castaneum]
Length = 309
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FTS QL+ELE F+R YPD+ TREE+AM LTEA
Sbjct: 92 RKQRRYRTTFTSYQLEELEKAFSRTHYPDVFTREELAMKIGLTEA 136
>gi|157132386|ref|XP_001662548.1| hypothetical protein AaeL_AAEL012405 [Aedes aegypti]
gi|108871202|gb|EAT35427.1| AAEL012405-PA [Aedes aegypti]
Length = 253
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 39/58 (67%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEALRETHAYSYNFLI 104
++QRR RT FTS QL+ELE F+R YPD+ TREE+AM LTEA + +S+ I
Sbjct: 195 RKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAMKIGLTEARIQVRNFSHIHCI 252
Score = 42.0 bits (97), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 19/32 (59%), Positives = 24/32 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMST 78
++QRR RT FTS QL+ELE F+R YPD+ T
Sbjct: 80 RKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 111
>gi|72084142|ref|XP_791442.1| PREDICTED: aristaless homeobox protein [Strongylocentrotus
purpuratus]
Length = 505
Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/57 (50%), Positives = 39/57 (68%)
Query: 35 DSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
+ SN+ + ++QRR RT FTS QL+ELE F + YPD+ TREE+AM +LTEA
Sbjct: 198 EHGSNAGDRPTKRKQRRYRTTFTSYQLEELERAFCKTHYPDVFTREELAMRVDLTEA 254
>gi|405977363|gb|EKC41820.1| Paired box protein Pax-7 [Crassostrea gigas]
Length = 466
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 45/68 (66%), Gaps = 1/68 (1%)
Query: 25 NDSIEDSSAKDSSSNSKNTKNSKR-QRRQRTHFTSQQLQELEATFARNRYPDMSTREEIA 83
+D E S ++S +S+ + KR QRR RT FT++QL+ELE F R YPD+ TREE+A
Sbjct: 208 DDKSEKSEDEESDCDSEPGLSVKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTREELA 267
Query: 84 MWTNLTEA 91
T LTEA
Sbjct: 268 QRTKLTEA 275
>gi|195148028|ref|XP_002014976.1| GL18665 [Drosophila persimilis]
gi|194106929|gb|EDW28972.1| GL18665 [Drosophila persimilis]
Length = 370
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 35/45 (77%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT QQL+ELE FA+ YPD+ TRE++AM NLTEA
Sbjct: 50 RKQRRNRTTFTLQQLEELETAFAQTHYPDVFTREDLAMKINLTEA 94
>gi|21955176|ref|NP_665710.1| dorsal root ganglia homeobox protein [Rattus norvegicus]
gi|6015028|sp|Q62798.1|DRGX_RAT RecName: Full=Dorsal root ganglia homeobox protein; AltName:
Full=Dorsal root ganglion 11; AltName: Full=Homeobox
protein DRG11; AltName: Full=Paired-related homeobox
protein-like 1
gi|1144015|gb|AAA87203.1| paired-like homeodomain transcription factor [Rattus norvegicus]
Length = 263
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT F QQL+ LEA FA+ YPD+ TREE+AM NLTEA
Sbjct: 31 RKQRRNRTTFALQQLEALEAVFAQTHYPDVFTREELAMKINLTEA 75
>gi|148238213|ref|NP_001079329.1| aristaless related homeobox [Xenopus laevis]
gi|23499459|gb|AAN05413.1| aristaless-related homeobox [Xenopus laevis]
gi|213623330|gb|AAI69601.1| Aristaless related homeobox [Xenopus laevis]
Length = 527
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 42/63 (66%)
Query: 29 EDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNL 88
E+S + S+S+ ++QRR RT FTS QL+ELE F + YPD+ TREE+AM +L
Sbjct: 272 EESVCLSAGSDSEEGMLKRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRLDL 331
Query: 89 TEA 91
TEA
Sbjct: 332 TEA 334
>gi|327281440|ref|XP_003225456.1| PREDICTED: dorsal root ganglia homeobox protein-like [Anolis
carolinensis]
Length = 261
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT QQL+ LE FA+ YPD+ TREE+AM NLTEA
Sbjct: 31 RKQRRNRTTFTLQQLEALETVFAQTHYPDVFTREELAMKINLTEA 75
>gi|348504974|ref|XP_003440036.1| PREDICTED: retinal homeobox protein Rx1-like [Oreochromis
niloticus]
Length = 355
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Query: 20 ELSNHNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTR 79
ELS SIE K S SK+ + K+ RR RT FT+ QL ELE F ++ YPD+ +R
Sbjct: 115 ELSELRKSIESDEGK-SPEPSKDEQPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSR 173
Query: 80 EEIAMWTNLTEA 91
EE+AM NL E
Sbjct: 174 EELAMKVNLPEV 185
>gi|46401362|gb|AAS92266.1| Pitx-2 [Oncorhynchus mykiss]
Length = 170
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/30 (90%), Positives = 28/30 (93%)
Query: 62 QELEATFARNRYPDMSTREEIAMWTNLTEA 91
QELEAT RNRYPDMSTREEIA+WTNLTEA
Sbjct: 1 QELEATLQRNRYPDMSTREEIAVWTNLTEA 30
>gi|80751123|ref|NP_001032182.1| dorsal root ganglia homeobox protein [Danio rerio]
gi|58759849|gb|AAW81987.1| paired-like homeodomain transcription factor DRG11 [Danio rerio]
Length = 287
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT QQL+ LEA FA+ YPD+ REE+AM NLTEA
Sbjct: 40 RKQRRNRTTFTLQQLEALEAVFAQTHYPDVFAREELAMKINLTEA 84
>gi|359682153|gb|AEV53628.1| paired box protein 7 [Sparus aurata]
Length = 502
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT++QL+ELE F R YPD+ TREE+A T LTEA
Sbjct: 213 RKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQGTKLTEA 257
>gi|340375161|ref|XP_003386105.1| PREDICTED: hypothetical protein LOC100637124 [Amphimedon
queenslandica]
Length = 332
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/44 (61%), Positives = 34/44 (77%)
Query: 48 RQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
+QRR RT+FTS QL+ELE F + RYPD+ REE+AM +LTEA
Sbjct: 131 KQRRHRTNFTSHQLEELEKAFEKTRYPDVFMREELAMKISLTEA 174
>gi|41615361|gb|AAS09957.1| Pax7 transcription factor, partial [Ambystoma mexicanum]
Length = 375
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT++QL+ELE F R YPD+ TREE+A T LTEA
Sbjct: 216 RKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEA 260
>gi|195388310|ref|XP_002052823.1| GJ17771 [Drosophila virilis]
gi|194149280|gb|EDW64978.1| GJ17771 [Drosophila virilis]
Length = 381
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 40/67 (59%), Gaps = 3/67 (4%)
Query: 25 NDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAM 84
N I D +S + ++QRR RT FTS QL+ELE F+R YPD+ TREE+AM
Sbjct: 51 NSPISD---PNSDCEADEYAPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAM 107
Query: 85 WTNLTEA 91
LTEA
Sbjct: 108 KIGLTEA 114
>gi|432098045|gb|ELK27932.1| Paired box protein Pax-7 [Myotis davidii]
Length = 592
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT++QL+ELE F R YPD+ TREE+A T LTEA
Sbjct: 338 RKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEA 382
>gi|345491839|ref|XP_001607712.2| PREDICTED: aristaless-related homeobox protein-like [Nasonia
vitripennis]
Length = 421
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 41/60 (68%)
Query: 32 SAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++ +S ++ + ++QRR RT FTS QL+ELE F+R YPD+ TREE+AM LTEA
Sbjct: 146 TSPESEADVDDFAPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAMKIGLTEA 205
>gi|312377652|gb|EFR24431.1| hypothetical protein AND_10977 [Anopheles darlingi]
Length = 167
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 35/45 (77%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT QQL+ELE FA+ YPD+ TRE++AM NLTEA
Sbjct: 117 RKQRRNRTTFTLQQLEELETAFAQTHYPDVFTREDLAMKINLTEA 161
>gi|170052026|ref|XP_001862034.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167872990|gb|EDS36373.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 219
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 44/74 (59%), Gaps = 2/74 (2%)
Query: 25 NDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAM 84
N + D + D + K ++QRR RT FTS QL+ELE F+R YPD+ TREE+AM
Sbjct: 117 NSPMSDQHSDDGGVDEFQPK--RKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAM 174
Query: 85 WTNLTEALRETHAY 98
LTEA + A+
Sbjct: 175 KIGLTEARIQAPAF 188
>gi|158297213|ref|XP_317481.4| AGAP007985-PA [Anopheles gambiae str. PEST]
gi|157015086|gb|EAA12409.4| AGAP007985-PA [Anopheles gambiae str. PEST]
Length = 354
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 41/70 (58%), Gaps = 3/70 (4%)
Query: 22 SNHNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREE 81
+ N + D + D + ++QRR RT FTS QL+ELE F+R YPD+ TREE
Sbjct: 55 GDPNSPLSDPHSDD---GGDDFAPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREE 111
Query: 82 IAMWTNLTEA 91
+AM LTEA
Sbjct: 112 LAMKIGLTEA 121
>gi|426328067|ref|XP_004024824.1| PREDICTED: paired box protein Pax-7 isoform 1 [Gorilla gorilla
gorilla]
Length = 518
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT++QL+ELE F R YPD+ TREE+A T LTEA
Sbjct: 213 RKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEA 257
>gi|4505619|ref|NP_002575.1| paired box protein Pax-7 isoform 1 [Homo sapiens]
gi|8247951|sp|P23759.3|PAX7_HUMAN RecName: Full=Paired box protein Pax-7; AltName: Full=HuP1
gi|2570015|emb|CAA65522.1| PAX7 [Homo sapiens]
gi|2570021|emb|CAA65520.1| paired box containing transcription factor [Homo sapiens]
gi|119615261|gb|EAW94855.1| paired box gene 7, isoform CRA_c [Homo sapiens]
Length = 520
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT++QL+ELE F R YPD+ TREE+A T LTEA
Sbjct: 215 RKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEA 259
>gi|395731076|ref|XP_003775838.1| PREDICTED: paired box protein Pax-7 isoform 2 [Pongo abelii]
Length = 518
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT++QL+ELE F R YPD+ TREE+A T LTEA
Sbjct: 213 RKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEA 257
>gi|393909901|gb|EFO23144.2| hypothetical protein LOAG_05341 [Loa loa]
Length = 577
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 45/76 (59%), Gaps = 2/76 (2%)
Query: 16 NIKTELSNHNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPD 75
++K +SN I D + S SNS ++QRR RT F++ QL ELE FAR YPD
Sbjct: 179 SMKPSVSNDLLGINDRPS--SCSNSPEDSGKRKQRRYRTTFSAYQLDELEKVFARTHYPD 236
Query: 76 MSTREEIAMWTNLTEA 91
+ TREE+A LTEA
Sbjct: 237 VFTREELAQRVILTEA 252
>gi|326921214|ref|XP_003206857.1| PREDICTED: exocyst complex component 5-like, partial [Meleagris
gallopavo]
Length = 763
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 37/59 (62%)
Query: 33 AKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
AK SS ++QRR+RT FT QL LEA FA+ RYPD+ REE+A+ NL E+
Sbjct: 702 AKSCSSRGHLKATPRKQRRERTTFTRAQLDVLEALFAKTRYPDIFMREEVALKINLPES 760
>gi|312076583|ref|XP_003140926.1| hypothetical protein LOAG_05341 [Loa loa]
Length = 553
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 44/76 (57%), Gaps = 2/76 (2%)
Query: 16 NIKTELSNHNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPD 75
++K +SN I D S SNS ++QRR RT F++ QL ELE FAR YPD
Sbjct: 179 SMKPSVSNDLLGINDR--PSSCSNSPEDSGKRKQRRYRTTFSAYQLDELEKVFARTHYPD 236
Query: 76 MSTREEIAMWTNLTEA 91
+ TREE+A LTEA
Sbjct: 237 VFTREELAQRVILTEA 252
>gi|85719151|dbj|BAE78538.1| aristaless [Harmonia axyridis]
Length = 314
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FTS QL+ELE F+R YPD+ TREE+AM LTEA
Sbjct: 94 RKQRRYRTTFTSYQLEELEKAFSRTHYPDVFTREELAMKIGLTEA 138
>gi|332261023|ref|XP_003279579.1| PREDICTED: LOW QUALITY PROTEIN: paired box protein Pax-7-like
[Nomascus leucogenys]
Length = 518
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT++QL+ELE F R YPD+ TREE+A T LTEA
Sbjct: 213 RKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEA 257
>gi|114554358|ref|XP_513156.2| PREDICTED: paired box protein Pax-7 isoform 2 [Pan troglodytes]
Length = 518
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT++QL+ELE F R YPD+ TREE+A T LTEA
Sbjct: 213 RKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEA 257
>gi|345794077|ref|XP_544533.3| PREDICTED: paired box protein Pax-7 [Canis lupus familiaris]
Length = 636
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT++QL+ELE F R YPD+ TREE+A T LTEA
Sbjct: 346 RKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEA 390
>gi|119615260|gb|EAW94854.1| paired box gene 7, isoform CRA_b [Homo sapiens]
Length = 504
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT++QL+ELE F R YPD+ TREE+A T LTEA
Sbjct: 214 RKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEA 258
>gi|119888927|ref|XP_616352.3| PREDICTED: paired box protein Pax-7 isoform 1 [Bos taurus]
gi|297472329|ref|XP_002685784.1| PREDICTED: paired box protein Pax-7 [Bos taurus]
gi|296490095|tpg|DAA32208.1| TPA: paired box 7 [Bos taurus]
Length = 505
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT++QL+ELE F R YPD+ TREE+A T LTEA
Sbjct: 215 RKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEA 259
>gi|7524359|ref|NP_039236.1| paired box protein Pax-7 isoform 2 [Homo sapiens]
gi|2570014|emb|CAA65521.1| PAX7 [Homo sapiens]
gi|111307751|gb|AAI21166.1| Paired box 7 [Homo sapiens]
gi|111307754|gb|AAI21167.1| Paired box 7 [Homo sapiens]
gi|119615259|gb|EAW94853.1| paired box gene 7, isoform CRA_a [Homo sapiens]
Length = 518
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT++QL+ELE F R YPD+ TREE+A T LTEA
Sbjct: 213 RKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEA 257
>gi|170038395|ref|XP_001847036.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167882013|gb|EDS45396.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 68
Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 35/45 (77%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT QQL+ELE FA+ YPD+ TRE++AM NLTEA
Sbjct: 20 RKQRRNRTTFTLQQLEELETAFAQTHYPDVFTREDLAMKINLTEA 64
>gi|157110497|ref|XP_001651130.1| hypothetical protein AaeL_AAEL015234 [Aedes aegypti]
gi|108868381|gb|EAT32606.1| AAEL015234-PA, partial [Aedes aegypti]
Length = 180
Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 35/45 (77%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT QQL+ELE FA+ YPD+ TRE++AM NLTEA
Sbjct: 17 RKQRRNRTTFTLQQLEELETAFAQTHYPDVFTREDLAMKINLTEA 61
>gi|345487147|ref|XP_001599246.2| PREDICTED: hypothetical protein LOC100114080 [Nasonia vitripennis]
Length = 988
Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT+QQL ELE F R +YPD+ TREE+A T LTEA
Sbjct: 644 RKQRRSRTTFTAQQLDELERAFERTQYPDIYTREELAQRTKLTEA 688
>gi|328719097|ref|XP_001949018.2| PREDICTED: paired box protein Pax-3-B-like [Acyrthosiphon pisum]
Length = 574
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 50/91 (54%), Gaps = 13/91 (14%)
Query: 12 PLIGNIKTELSNHNDSIEDSSAKDSSSNSKNTKNS-----------KRQRRQRTHFTSQQ 60
P I I L H+ +DS+++ S+ K + S ++QRR RT FT+ Q
Sbjct: 147 PSISAISRLLRGHDG--DDSASEKKVSDGKTSDGSDCDSEPGIPLKRKQRRSRTTFTALQ 204
Query: 61 LQELEATFARNRYPDMSTREEIAMWTNLTEA 91
L ELE F R +YPD+ TREE+A T LTEA
Sbjct: 205 LDELEKAFERTQYPDIYTREELAQRTKLTEA 235
>gi|351711816|gb|EHB14735.1| Paired box protein Pax-7 [Heterocephalus glaber]
Length = 457
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT++QL+ELE F R YPD+ TREE+A T LTEA
Sbjct: 197 RKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEA 241
>gi|397486749|ref|XP_003814486.1| PREDICTED: paired box protein Pax-7 [Pan paniscus]
Length = 505
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT++QL+ELE F R YPD+ TREE+A T LTEA
Sbjct: 215 RKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEA 259
>gi|207029223|ref|NP_001128726.1| paired box protein Pax-7 isoform 3 [Homo sapiens]
gi|114554356|ref|XP_001157066.1| PREDICTED: paired box protein Pax-7 isoform 1 [Pan troglodytes]
gi|426328069|ref|XP_004024825.1| PREDICTED: paired box protein Pax-7 isoform 2 [Gorilla gorilla
gorilla]
gi|410341459|gb|JAA39676.1| paired box 7 [Pan troglodytes]
Length = 505
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT++QL+ELE F R YPD+ TREE+A T LTEA
Sbjct: 215 RKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEA 259
>gi|443715779|gb|ELU07595.1| hypothetical protein CAPTEDRAFT_70059, partial [Capitella teleta]
Length = 65
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/46 (65%), Positives = 35/46 (76%)
Query: 46 SKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FTS QL+ELE FA YPD+ TREEIAM T+LTEA
Sbjct: 2 KRKQRRIRTTFTSAQLKELEKAFAETHYPDIYTREEIAMKTDLTEA 47
>gi|195350083|ref|XP_002041571.1| GM16736 [Drosophila sechellia]
gi|195575531|ref|XP_002077631.1| GD23020 [Drosophila simulans]
gi|194123344|gb|EDW45387.1| GM16736 [Drosophila sechellia]
gi|194189640|gb|EDX03216.1| GD23020 [Drosophila simulans]
Length = 410
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FTS QL+ELE F+R YPD+ TREE+AM LTEA
Sbjct: 83 RKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAMKIGLTEA 127
>gi|83940796|gb|ABC48797.1| PAX7 transcriptional factor isoform B [Homo sapiens]
Length = 505
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT++QL+ELE F R YPD+ TREE+A T LTEA
Sbjct: 215 RKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEA 259
>gi|390342936|ref|XP_003725762.1| PREDICTED: diencephalon/mesencephalon homeobox protein 1-B-like
isoform 1 [Strongylocentrotus purpuratus]
gi|390342938|ref|XP_781076.2| PREDICTED: diencephalon/mesencephalon homeobox protein 1-B-like
isoform 2 [Strongylocentrotus purpuratus]
Length = 391
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 33/45 (73%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT+QQL LE TFA+ YPD+ RE +AM TNL EA
Sbjct: 56 RKQRRSRTAFTNQQLAALEKTFAKTHYPDVVMRERLAMCTNLPEA 100
>gi|344283453|ref|XP_003413486.1| PREDICTED: paired box protein Pax-7-like [Loxodonta africana]
Length = 505
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT++QL+ELE F R YPD+ TREE+A T LTEA
Sbjct: 215 RKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEA 259
>gi|602343|emb|CAA84513.1| PAX7 paired box containing transcription factor [Homo sapiens]
Length = 467
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT++QL+ELE F R YPD+ TREE+A T LTEA
Sbjct: 215 RKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEA 259
>gi|195470248|ref|XP_002087420.1| GE16769 [Drosophila yakuba]
gi|194173521|gb|EDW87132.1| GE16769 [Drosophila yakuba]
Length = 410
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FTS QL+ELE F+R YPD+ TREE+AM LTEA
Sbjct: 83 RKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAMKIGLTEA 127
>gi|391332291|ref|XP_003740569.1| PREDICTED: uncharacterized protein LOC100905961 [Metaseiulus
occidentalis]
Length = 302
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FTS QL+ELE F YPD+ TREEIAM T+LTEA
Sbjct: 138 RKQRRIRTTFTSAQLRELERAFQETHYPDIYTREEIAMKTDLTEA 182
>gi|355002441|gb|AER51845.1| cone-rod homeobox, partial [Rhinophylla pumilio]
Length = 268
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 34/44 (77%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTE 90
++QRR+RT FT QL+ELEA FA+ +YPD+ REE+A+ NL E
Sbjct: 29 RKQRRERTTFTRSQLEELEALFAKTQYPDVYAREEVALKINLPE 72
>gi|195118282|ref|XP_002003669.1| GI21624 [Drosophila mojavensis]
gi|193914244|gb|EDW13111.1| GI21624 [Drosophila mojavensis]
Length = 397
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 40/67 (59%), Gaps = 3/67 (4%)
Query: 25 NDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAM 84
N I D +S + ++QRR RT FTS QL+ELE F+R YPD+ TREE+AM
Sbjct: 51 NSPISD---PNSDCEADEYAPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAM 107
Query: 85 WTNLTEA 91
LTEA
Sbjct: 108 KIGLTEA 114
>gi|194756342|ref|XP_001960438.1| GF11512 [Drosophila ananassae]
gi|190621736|gb|EDV37260.1| GF11512 [Drosophila ananassae]
Length = 458
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 35/45 (77%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT++QL+ LE FAR +YPD+ TREE+A T LTEA
Sbjct: 180 RKQRRSRTTFTAEQLEALERAFARTQYPDVYTREELAQTTGLTEA 224
>gi|399146688|gb|AFP25466.1| paired box 7 [Anas platyrhynchos]
Length = 503
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT++QL+ELE F R YPD+ TREE+A T LTEA
Sbjct: 214 RKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEA 258
>gi|195032675|ref|XP_001988540.1| GH11220 [Drosophila grimshawi]
gi|193904540|gb|EDW03407.1| GH11220 [Drosophila grimshawi]
Length = 376
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 40/67 (59%), Gaps = 3/67 (4%)
Query: 25 NDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAM 84
N I D +S + ++QRR RT FTS QL+ELE F+R YPD+ TREE+AM
Sbjct: 49 NSPISD---PNSDCEVDDYAPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAM 105
Query: 85 WTNLTEA 91
LTEA
Sbjct: 106 KIGLTEA 112
>gi|440892608|gb|ELR45722.1| Paired box protein Pax-7 [Bos grunniens mutus]
Length = 502
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT++QL+ELE F R YPD+ TREE+A T LTEA
Sbjct: 215 RKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEA 259
>gi|355744963|gb|EHH49588.1| hypothetical protein EGM_00276, partial [Macaca fascicularis]
Length = 516
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT++QL+ELE F R YPD+ TREE+A T LTEA
Sbjct: 211 RKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEA 255
>gi|297666243|ref|XP_002811443.1| PREDICTED: paired box protein Pax-7 isoform 1 [Pongo abelii]
Length = 505
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT++QL+ELE F R YPD+ TREE+A T LTEA
Sbjct: 215 RKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEA 259
>gi|296206868|ref|XP_002750384.1| PREDICTED: paired box protein Pax-7 [Callithrix jacchus]
Length = 502
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT++QL+ELE F R YPD+ TREE+A T LTEA
Sbjct: 215 RKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEA 259
>gi|119615262|gb|EAW94856.1| paired box gene 7, isoform CRA_d [Homo sapiens]
gi|410341457|gb|JAA39675.1| paired box 7 [Pan troglodytes]
gi|410341461|gb|JAA39677.1| paired box 7 [Pan troglodytes]
Length = 503
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT++QL+ELE F R YPD+ TREE+A T LTEA
Sbjct: 213 RKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEA 257
>gi|118343665|ref|NP_001071654.1| transcription factor protein [Ciona intestinalis]
gi|70568894|dbj|BAE06312.1| transcription factor protein [Ciona intestinalis]
Length = 429
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 46/72 (63%), Gaps = 4/72 (5%)
Query: 20 ELSNHNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTR 79
E+S S++ SS D NS + ++QRR RT F++ QL+ELE F + YPD+ TR
Sbjct: 195 EVSELTSSVQTSSPDDQDRNS----SKRKQRRYRTTFSAFQLEELERAFQKTHYPDVFTR 250
Query: 80 EEIAMWTNLTEA 91
EE+AM +LTEA
Sbjct: 251 EELAMRVDLTEA 262
>gi|108735476|gb|ABG00197.1| Alx1 [Paracentrotus lividus]
Length = 519
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 44/68 (64%), Gaps = 3/68 (4%)
Query: 25 NDSIEDSSAKDSSSNSKNTKNSKRQ-RRQRTHFTSQQLQELEATFARNRYPDMSTREEIA 83
ND ++ S D + KN ++KR+ RR RT FTS QL+E+E F R YPD+ RE++A
Sbjct: 177 NDDVK--SPGDPKDDDKNDSDAKRKKRRNRTTFTSYQLEEMEKVFQRTHYPDVYCREQLA 234
Query: 84 MWTNLTEA 91
+ +LTEA
Sbjct: 235 LRCDLTEA 242
>gi|51869701|emb|CAH04387.1| paired box protein 7 [Salmo salar]
Length = 502
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT++QL+ELE F R YPD+ TREE+A T LTEA
Sbjct: 214 RKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEA 258
>gi|355002451|gb|AER51850.1| cone-rod homeobox, partial [Pteronotus parnellii]
Length = 262
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 35/45 (77%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR+RT FT QL+ELEA FA+ +YPD+ REE+A+ NL E+
Sbjct: 6 RKQRRERTTFTRSQLEELEALFAKTQYPDVYAREEVALKINLPES 50
>gi|391338110|ref|XP_003743404.1| PREDICTED: uncharacterized protein LOC100901399 [Metaseiulus
occidentalis]
Length = 789
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/43 (65%), Positives = 33/43 (76%)
Query: 49 QRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
QRR RT FT QQL+ELE FA+ YPD+ TRE++AM NLTEA
Sbjct: 298 QRRNRTTFTVQQLEELERAFAQTHYPDVFTREDLAMKINLTEA 340
>gi|432112496|gb|ELK35234.1| Dorsal root ganglia homeobox protein [Myotis davidii]
Length = 180
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 35/45 (77%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT QQL+ LEA FA+ YPD+ TREE+AM NLTEA
Sbjct: 73 RKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEA 117
>gi|403287533|ref|XP_003934998.1| PREDICTED: paired box protein Pax-7 [Saimiri boliviensis
boliviensis]
Length = 502
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT++QL+ELE F R YPD+ TREE+A T LTEA
Sbjct: 215 RKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEA 259
>gi|195058142|ref|XP_001995396.1| GH23137 [Drosophila grimshawi]
gi|193899602|gb|EDV98468.1| GH23137 [Drosophila grimshawi]
Length = 351
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 36/45 (80%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT++QL+ LE FAR +YPD+ TREE+A T+LTEA
Sbjct: 180 RKQRRSRTTFTAEQLEALERAFARTQYPDVYTREELAQTTSLTEA 224
>gi|194853423|ref|XP_001968163.1| GG24714 [Drosophila erecta]
gi|190660030|gb|EDV57222.1| GG24714 [Drosophila erecta]
Length = 416
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 40/67 (59%), Gaps = 3/67 (4%)
Query: 25 NDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAM 84
N + D +S + ++QRR RT FTS QL+ELE F+R YPD+ TREE+AM
Sbjct: 70 NSPVSDG---NSDCEADEYAPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAM 126
Query: 85 WTNLTEA 91
LTEA
Sbjct: 127 KIGLTEA 133
>gi|260831720|ref|XP_002610806.1| paired box protein [Branchiostoma floridae]
gi|229296175|gb|EEN66816.1| paired box protein [Branchiostoma floridae]
Length = 464
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 27/45 (60%), Positives = 33/45 (73%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT +QL+ELE F R YPD+ TREE+A T LTEA
Sbjct: 187 RKQRRSRTTFTPEQLEELEKAFERTHYPDIYTREELAQRTKLTEA 231
>gi|17569327|ref|NP_509860.1| Protein ALR-1 [Caenorhabditis elegans]
gi|3878964|emb|CAA92001.1| Protein ALR-1 [Caenorhabditis elegans]
Length = 362
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 26 DSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMW 85
D+ E+ S D + NS + ++QRR RT F++ QL ELE FAR YPD+ TREE+A
Sbjct: 95 DNRENGSPSDGT-NSPDDNGKRKQRRYRTTFSAFQLDELEKVFARTHYPDVFTREELATR 153
Query: 86 TNLTEA 91
LTEA
Sbjct: 154 VQLTEA 159
>gi|432857459|ref|XP_004068691.1| PREDICTED: paired box protein Pax-7-like isoform 4 [Oryzias
latipes]
Length = 517
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT++QL+ELE F R YPD+ TREE+A T LTEA
Sbjct: 228 RKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEA 272
>gi|268578085|ref|XP_002644025.1| C. briggsae CBR-ALR-1 protein [Caenorhabditis briggsae]
Length = 360
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Query: 26 DSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMW 85
D E+ S D + NS + ++QRR RT F++ QL ELE FAR YPD+ TREE+A
Sbjct: 97 DGRENGSPSDGT-NSPDDNGKRKQRRYRTTFSAFQLDELEKVFARTHYPDVFTREELATR 155
Query: 86 TNLTEA 91
LTEA
Sbjct: 156 VQLTEA 161
>gi|301782923|ref|XP_002926876.1| PREDICTED: LOW QUALITY PROTEIN: paired box protein Pax-7-like
[Ailuropoda melanoleuca]
Length = 505
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT++QL+ELE F R YPD+ TREE+A T LTEA
Sbjct: 215 RKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEA 259
>gi|21396471|gb|AAM49062.1| transcription factor DRG11 [Mus musculus]
Length = 95
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 35/45 (77%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT QQL+ LEA FA+ YPD+ TREE+AM NLTEA
Sbjct: 22 RKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEA 66
>gi|391327510|ref|XP_003738241.1| PREDICTED: paired box protein Pax-7-like [Metaseiulus occidentalis]
Length = 665
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 29 EDSSAKDSSSNSKNTKNSKR-QRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTN 87
E+S + D + + KR QRR RT FT+QQL ELE F R +YPD+ TREE+ T
Sbjct: 334 ENSVSSDGGGDGEVGITLKRKQRRSRTTFTAQQLDELEKAFERTQYPDVYTREELGQRTR 393
Query: 88 LTEA 91
LTEA
Sbjct: 394 LTEA 397
>gi|355002469|gb|AER51859.1| cone-rod homeobox, partial [Rhinolophus marshalli]
Length = 255
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 34/44 (77%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTE 90
++QRR+RT FT QL+ELEA FA+ +YPD+ REE+A+ NL E
Sbjct: 29 RKQRRERTTFTRSQLEELEALFAKTQYPDVYAREEVALKINLPE 72
>gi|348570856|ref|XP_003471212.1| PREDICTED: paired box protein Pax-7 [Cavia porcellus]
Length = 517
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT++QL+ELE F R YPD+ TREE+A T LTEA
Sbjct: 228 RKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEA 272
>gi|300795246|ref|NP_001178913.1| paired box protein Pax-7 [Rattus norvegicus]
Length = 503
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT++QL+ELE F R YPD+ TREE+A T LTEA
Sbjct: 213 RKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEA 257
>gi|108998495|ref|XP_001091106.1| PREDICTED: paired box protein Pax-7-like isoform 1 [Macaca mulatta]
Length = 505
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT++QL+ELE F R YPD+ TREE+A T LTEA
Sbjct: 215 RKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEA 259
>gi|348534164|ref|XP_003454573.1| PREDICTED: paired box protein Pax-7-like isoform 2 [Oreochromis
niloticus]
Length = 516
Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 46/76 (60%), Gaps = 3/76 (3%)
Query: 16 NIKTELSNHNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPD 75
+I L + + +D+S DS + ++QRR RT FT++QL+ELE F R YPD
Sbjct: 199 SIDGILGDKCNRTDDASDVDSE---PDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPD 255
Query: 76 MSTREEIAMWTNLTEA 91
+ TREE+A T LTEA
Sbjct: 256 IYTREELAQRTKLTEA 271
>gi|324533481|gb|ADY49311.1| Paired mesoderm homeobox protein 2B [Ascaris suum]
Length = 146
Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 38/65 (58%)
Query: 27 SIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWT 86
I SS + S N ++QRR RT FT QL+ELE F YPD+ TRE+IAM
Sbjct: 11 GIPGSSLVGAICGSGNPSERRKQRRIRTTFTPGQLKELERAFLETHYPDIYTREDIAMRI 70
Query: 87 NLTEA 91
+LTEA
Sbjct: 71 DLTEA 75
>gi|432857455|ref|XP_004068689.1| PREDICTED: paired box protein Pax-7-like isoform 2 [Oryzias
latipes]
Length = 510
Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT++QL+ELE F R YPD+ TREE+A T LTEA
Sbjct: 221 RKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEA 265
>gi|432857457|ref|XP_004068690.1| PREDICTED: paired box protein Pax-7-like isoform 3 [Oryzias
latipes]
Length = 511
Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT++QL+ELE F R YPD+ TREE+A T LTEA
Sbjct: 222 RKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEA 266
>gi|41581181|emb|CAF02090.1| paired box protein 7 [Salmo salar]
Length = 519
Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT++QL+ELE F R YPD+ TREE+A T LTEA
Sbjct: 231 RKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEA 275
>gi|122892559|gb|ABM67330.1| PAX7 [Hylobates klossii]
Length = 111
Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT++QL+ELE F R YPD+ TREE+A T LTEA
Sbjct: 64 RKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEA 108
>gi|432857453|ref|XP_004068688.1| PREDICTED: paired box protein Pax-7-like isoform 1 [Oryzias
latipes]
Length = 508
Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT++QL+ELE F R YPD+ TREE+A T LTEA
Sbjct: 219 RKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEA 263
>gi|348534168|ref|XP_003454575.1| PREDICTED: paired box protein Pax-7-like isoform 4 [Oreochromis
niloticus]
Length = 518
Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT++QL+ELE F R YPD+ TREE+A T LTEA
Sbjct: 229 RKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEA 273
>gi|354470034|ref|XP_003497402.1| PREDICTED: diencephalon/mesencephalon homeobox protein 1 isoform 1
[Cricetulus griseus]
gi|344238464|gb|EGV94567.1| Diencephalon/mesencephalon homeobox protein 1 [Cricetulus griseus]
Length = 378
Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 33/45 (73%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT+QQL+ LE TF + YPD+ RE +AM TNL EA
Sbjct: 64 RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEA 108
>gi|51869705|emb|CAH04389.1| paired box protein 7 [Salmo salar]
Length = 508
Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT++QL+ELE F R YPD+ TREE+A T LTEA
Sbjct: 220 RKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEA 264
>gi|51869695|emb|CAH04384.1| paired box protein 7 [Salmo salar]
Length = 515
Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT++QL+ELE F R YPD+ TREE+A T LTEA
Sbjct: 227 RKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEA 271
>gi|381216174|gb|AFF61347.1| paired box protein 7 alpha variant 1 [Oncorhynchus mykiss]
Length = 515
Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT++QL+ELE F R YPD+ TREE+A T LTEA
Sbjct: 227 RKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEA 271
>gi|9621907|gb|AAF89581.1|AF165886_1 paired-box transcription factor [Branchiostoma floridae]
Length = 464
Score = 58.9 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 27/45 (60%), Positives = 33/45 (73%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT +QL+ELE F R YPD+ TREE+A T LTEA
Sbjct: 187 RKQRRSRTTFTPEQLEELEKAFERTHYPDIYTREELAQRTKLTEA 231
>gi|51869703|emb|CAH04388.1| paired box protein 7 [Salmo salar]
Length = 516
Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT++QL+ELE F R YPD+ TREE+A T LTEA
Sbjct: 228 RKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEA 272
>gi|410966276|ref|XP_003989659.1| PREDICTED: paired box protein Pax-7 [Felis catus]
Length = 503
Score = 58.9 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT++QL+ELE F R YPD+ TREE+A T LTEA
Sbjct: 215 RKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEA 259
>gi|381216182|gb|AFF61351.1| paired box protein 7 beta variant 1 [Oncorhynchus mykiss]
Length = 518
Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT++QL+ELE F R YPD+ TREE+A T LTEA
Sbjct: 230 RKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEA 274
>gi|313227120|emb|CBY22267.1| unnamed protein product [Oikopleura dioica]
Length = 487
Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT++QL+ELE F R YPD+ TREE+A T LTEA
Sbjct: 235 RKQRRSRTTFTAEQLEELEKCFERTHYPDIYTREELAQRTKLTEA 279
>gi|148226698|ref|NP_001088995.1| paired box 7 [Xenopus laevis]
gi|52082690|gb|AAU25938.1| myogenic specification paired-box transcription factor Pax7
[Xenopus laevis]
Length = 500
Score = 58.9 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT++QL+ELE F R YPD+ TREE+A T LTEA
Sbjct: 214 RKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEA 258
>gi|53125980|emb|CAG25715.1| paired box protein 7 [Salvelinus alpinus]
Length = 510
Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT++QL+ELE F R YPD+ TREE+A T LTEA
Sbjct: 222 RKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEA 266
>gi|53125901|emb|CAG25526.1| paired box protein 7 [Salvelinus alpinus]
Length = 502
Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT++QL+ELE F R YPD+ TREE+A T LTEA
Sbjct: 214 RKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEA 258
>gi|355002389|gb|AER51819.1| cone-rod homeobox, partial [Eonycteris spelaea]
Length = 267
Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 34/44 (77%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTE 90
++QRR+RT FT QL+ELEA FA+ +YPD+ REE+A+ NL E
Sbjct: 29 RKQRRERTTFTRSQLEELEALFAKTQYPDVYAREEVALKINLPE 72
>gi|41615484|tpg|DAA03500.1| TPA_inf: HDC00631 [Drosophila melanogaster]
Length = 130
Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 35/45 (77%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT QQL+ELE FA+ YPD+ TRE++AM NLTEA
Sbjct: 67 RKQRRNRTTFTLQQLEELETAFAQTHYPDVFTREDLAMKINLTEA 111
>gi|185133665|ref|NP_001117167.1| paired box protein 7 [Salmo salar]
gi|51869693|emb|CAH04383.1| paired box protein 7 [Salmo salar]
Length = 520
Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT++QL+ELE F R YPD+ TREE+A T LTEA
Sbjct: 231 RKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEA 275
>gi|385251415|ref|NP_001245266.1| paired box 7 [Oncorhynchus mykiss]
gi|381216180|gb|AFF61350.1| paired box protein 7 alpha variant 4 [Oncorhynchus mykiss]
Length = 502
Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT++QL+ELE F R YPD+ TREE+A T LTEA
Sbjct: 214 RKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEA 258
>gi|381216178|gb|AFF61349.1| paired box protein 7 alpha variant 3 [Oncorhynchus mykiss]
Length = 506
Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT++QL+ELE F R YPD+ TREE+A T LTEA
Sbjct: 218 RKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEA 262
>gi|381216176|gb|AFF61348.1| paired box protein 7 alpha variant 2 [Oncorhynchus mykiss]
Length = 514
Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT++QL+ELE F R YPD+ TREE+A T LTEA
Sbjct: 226 RKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEA 270
>gi|34328055|ref|NP_035169.1| paired box protein Pax-7 [Mus musculus]
gi|52788256|sp|P47239.2|PAX7_MOUSE RecName: Full=Paired box protein Pax-7
gi|20522260|gb|AAG16663.3|AF254422_1 paired box transcription factor PAX7 [Mus musculus]
gi|162318458|gb|AAI56073.1| Paired box gene 7 [synthetic construct]
gi|162319578|gb|AAI56885.1| Paired box gene 7 [synthetic construct]
Length = 503
Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT++QL+ELE F R YPD+ TREE+A T LTEA
Sbjct: 213 RKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEA 257
>gi|51869699|emb|CAH04386.1| paired box protein 7 [Salmo salar]
Length = 506
Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT++QL+ELE F R YPD+ TREE+A T LTEA
Sbjct: 218 RKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEA 262
>gi|355002453|gb|AER51851.1| cone-rod homeobox, partial [Artibeus lituratus]
Length = 267
Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 34/44 (77%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTE 90
++QRR+RT FT QL+ELEA FA+ +YPD+ REE+A+ NL E
Sbjct: 29 RKQRRERTTFTRSQLEELEALFAKTQYPDVYAREEVALKINLPE 72
>gi|381216184|gb|AFF61352.1| paired box protein 7 beta variant 2 [Oncorhynchus mykiss]
Length = 514
Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT++QL+ELE F R YPD+ TREE+A T LTEA
Sbjct: 226 RKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEA 270
>gi|348534166|ref|XP_003454574.1| PREDICTED: paired box protein Pax-7-like isoform 3 [Oreochromis
niloticus]
Length = 509
Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT++QL+ELE F R YPD+ TREE+A T LTEA
Sbjct: 220 RKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEA 264
>gi|53126008|emb|CAG25717.1| paired box protein 7 [Salvelinus alpinus]
Length = 502
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT++QL+ELE F R YPD+ TREE+A T LTEA
Sbjct: 214 RKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEA 258
>gi|53125887|emb|CAG25525.1| paired box protein 7 [Salvelinus alpinus]
Length = 497
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT++QL+ELE F R YPD+ TREE+A T LTEA
Sbjct: 209 RKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEA 253
>gi|391345791|ref|XP_003747166.1| PREDICTED: homeobox protein aristaless-like [Metaseiulus
occidentalis]
Length = 317
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FTS QL+ELE F + YPD+ TREE+AM +LTEA
Sbjct: 52 RKQRRYRTTFTSYQLEELEKAFGKTHYPDVFTREELAMRVDLTEA 96
>gi|381216190|gb|AFF61355.1| paired box protein 7 beta variant 5 [Oncorhynchus mykiss]
Length = 501
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT++QL+ELE F R YPD+ TREE+A T LTEA
Sbjct: 213 RKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEA 257
>gi|381216186|gb|AFF61353.1| paired box protein 7 beta variant 3 [Oncorhynchus mykiss]
Length = 514
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT++QL+ELE F R YPD+ TREE+A T LTEA
Sbjct: 226 RKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEA 270
>gi|348534162|ref|XP_003454572.1| PREDICTED: paired box protein Pax-7-like isoform 1 [Oreochromis
niloticus]
Length = 502
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 46/76 (60%), Gaps = 3/76 (3%)
Query: 16 NIKTELSNHNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPD 75
+I L + + +D+S DS + ++QRR RT FT++QL+ELE F R YPD
Sbjct: 185 SIDGILGDKCNRTDDASDVDSE---PDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPD 241
Query: 76 MSTREEIAMWTNLTEA 91
+ TREE+A T LTEA
Sbjct: 242 IYTREELAQRTKLTEA 257
>gi|224052522|ref|XP_002187168.1| PREDICTED: dorsal root ganglia homeobox protein [Taeniopygia
guttata]
Length = 261
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 35/45 (77%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT QQL+ LEA FA+ YPD+ T+EE+A+ NLTEA
Sbjct: 31 RKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTKEELALKINLTEA 75
>gi|53125916|emb|CAG25520.1| paired box protein 7 [Salvelinus alpinus]
Length = 513
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT++QL+ELE F R YPD+ TREE+A T LTEA
Sbjct: 225 RKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEA 269
>gi|213626247|gb|AAI70120.1| LOC496378 protein [Xenopus laevis]
Length = 501
Score = 58.9 bits (141), Expect = 4e-07, Method: Composition-based stats.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT++QL+ELE F R YPD+ TREE+A T LTEA
Sbjct: 215 RKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEA 259
>gi|53126022|emb|CAG25718.1| paired box protein 7 [Salvelinus alpinus]
Length = 501
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT++QL+ELE F R YPD+ TREE+A T LTEA
Sbjct: 213 RKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEA 257
>gi|51869697|emb|CAH04385.1| paired box protein 7 [Salmo salar]
Length = 514
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT++QL+ELE F R YPD+ TREE+A T LTEA
Sbjct: 226 RKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEA 270
>gi|410921502|ref|XP_003974222.1| PREDICTED: retinal homeobox protein Rx1-like [Takifugu rubripes]
Length = 350
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Query: 20 ELSNHNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTR 79
ELS S+E K S + K+ + K+ RR RT FT+ QL ELE F ++ YPD+ +R
Sbjct: 115 ELSELRKSVESDEGK-SPESCKDDQPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSR 173
Query: 80 EEIAMWTNLTEA 91
EE+AM NL E
Sbjct: 174 EELAMKVNLPEV 185
>gi|402853155|ref|XP_003891265.1| PREDICTED: paired box protein Pax-7 [Papio anubis]
Length = 504
Score = 58.9 bits (141), Expect = 4e-07, Method: Composition-based stats.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT++QL+ELE F R YPD+ TREE+A T LTEA
Sbjct: 214 RKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEA 258
>gi|381216194|gb|AFF61357.1| paired box protein 7 beta variant 7 [Oncorhynchus mykiss]
Length = 501
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT++QL+ELE F R YPD+ TREE+A T LTEA
Sbjct: 213 RKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEA 257
>gi|186680512|gb|ACC86107.1| paired box protein 7 transcript variant 1 [Sternopygus macrurus]
Length = 300
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT++QL+ELE F R YPD+ TREE+A T LTEA
Sbjct: 218 RKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEA 262
>gi|53125994|emb|CAG25716.1| paired box protein 7 [Salvelinus alpinus]
Length = 514
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT++QL+ELE F R YPD+ TREE+A T LTEA
Sbjct: 226 RKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEA 270
>gi|301626098|ref|XP_002942235.1| PREDICTED: paired box protein Pax-7-like isoform 1 [Xenopus
(Silurana) tropicalis]
Length = 502
Score = 58.9 bits (141), Expect = 4e-07, Method: Composition-based stats.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT++QL+ELE F R YPD+ TREE+A T LTEA
Sbjct: 214 RKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEA 258
>gi|53125966|emb|CAG25714.1| paired box protein 7 [Salvelinus alpinus]
Length = 505
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT++QL+ELE F R YPD+ TREE+A T LTEA
Sbjct: 217 RKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEA 261
>gi|355002363|gb|AER51806.1| cone-rod homeobox, partial [Hipposideros armiger]
gi|355002419|gb|AER51834.1| cone-rod homeobox, partial [Hipposideros armiger]
Length = 285
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 34/44 (77%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTE 90
++QRR+RT FT QL+ELEA FA+ +YPD+ REE+A+ NL E
Sbjct: 29 RKQRRERTTFTRSQLEELEALFAKTQYPDVYAREEVALKINLPE 72
>gi|385251413|ref|NP_001245265.1| paired box gene 7b [Oncorhynchus mykiss]
gi|381216192|gb|AFF61356.1| paired box protein 7 beta variant 6 [Oncorhynchus mykiss]
Length = 497
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT++QL+ELE F R YPD+ TREE+A T LTEA
Sbjct: 209 RKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEA 253
>gi|381216188|gb|AFF61354.1| paired box protein 7 beta variant 4 [Oncorhynchus mykiss]
Length = 505
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT++QL+ELE F R YPD+ TREE+A T LTEA
Sbjct: 217 RKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEA 261
>gi|354470038|ref|XP_003497403.1| PREDICTED: diencephalon/mesencephalon homeobox protein 1 isoform 2
[Cricetulus griseus]
Length = 383
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 33/45 (73%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT+QQL+ LE TF + YPD+ RE +AM TNL EA
Sbjct: 69 RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEA 113
>gi|301626100|ref|XP_002942236.1| PREDICTED: paired box protein Pax-7-like isoform 2 [Xenopus
(Silurana) tropicalis]
Length = 509
Score = 58.9 bits (141), Expect = 4e-07, Method: Composition-based stats.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT++QL+ELE F R YPD+ TREE+A T LTEA
Sbjct: 221 RKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEA 265
>gi|260178657|gb|ACX34051.1| paired box transcription factor 7 isoform 2 [Maylandia sp. 'Kompakt
Mbamba Bay']
Length = 505
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT++QL+ELE F R YPD+ TREE+A T LTEA
Sbjct: 216 RKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEA 260
>gi|355002411|gb|AER51830.1| cone-rod homeobox, partial [Hipposideros larvatus]
Length = 285
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 34/44 (77%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTE 90
++QRR+RT FT QL+ELEA FA+ +YPD+ REE+A+ NL E
Sbjct: 29 RKQRRERTTFTRSQLEELEALFAKTQYPDVYAREEVALKINLPE 72
>gi|348544801|ref|XP_003459869.1| PREDICTED: paired box protein Pax-7-like isoform 2 [Oreochromis
niloticus]
Length = 526
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT++QL+ELE F R YPD+ TREE+A T LTEA
Sbjct: 232 RKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEA 276
>gi|53125929|emb|CAG25521.1| paired box protein 7 [Salvelinus alpinus]
Length = 510
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT++QL+ELE F R YPD+ TREE+A T LTEA
Sbjct: 222 RKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEA 266
>gi|24158435|ref|NP_571400.1| paired box 7 isoform 1 [Danio rerio]
gi|2909769|gb|AAC41255.1| transcription factor PAX7C [Danio rerio]
gi|122891363|emb|CAM12909.1| paired box gene 7 [Danio rerio]
gi|190337573|gb|AAI63502.1| Paired box gene 7a [Danio rerio]
gi|190337587|gb|AAI63523.1| Paired box gene 7a [Danio rerio]
Length = 507
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT++QL+ELE F R YPD+ TREE+A T LTEA
Sbjct: 218 RKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEA 262
>gi|86355081|dbj|BAE78775.1| paired box containing Pax7 [Pelodiscus sinensis]
Length = 436
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT++QL+ELE F R YPD+ TREE+A T LTEA
Sbjct: 147 RKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEA 191
>gi|395821127|ref|XP_003783899.1| PREDICTED: paired box protein Pax-7 [Otolemur garnettii]
Length = 505
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT++QL+ELE F R YPD+ TREE+A T LTEA
Sbjct: 215 RKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEA 259
>gi|355002443|gb|AER51846.1| cone-rod homeobox, partial [Cormura brevirostris]
Length = 285
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 34/44 (77%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTE 90
++QRR+RT FT QL+ELEA FA+ +YPD+ REE+A+ NL E
Sbjct: 29 RKQRRERTTFTRSQLEELEALFAKTQYPDVYAREEVALKINLPE 72
>gi|301626102|ref|XP_002942237.1| PREDICTED: paired box protein Pax-7-like isoform 3 [Xenopus
(Silurana) tropicalis]
Length = 523
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT++QL+ELE F R YPD+ TREE+A T LTEA
Sbjct: 213 RKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEA 257
>gi|260178655|gb|ACX34050.1| paired box transcription factor 7 isoform 1 [Maylandia sp. 'Kompakt
Mbamba Bay']
Length = 502
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT++QL+ELE F R YPD+ TREE+A T LTEA
Sbjct: 213 RKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEA 257
>gi|186680510|gb|ACC86106.1| paired box protein 7 [Sternopygus macrurus]
Length = 507
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT++QL+ELE F R YPD+ TREE+A T LTEA
Sbjct: 218 RKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEA 262
>gi|348544799|ref|XP_003459868.1| PREDICTED: paired box protein Pax-7-like isoform 1 [Oreochromis
niloticus]
Length = 512
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT++QL+ELE F R YPD+ TREE+A T LTEA
Sbjct: 218 RKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEA 262
>gi|21623544|dbj|BAC00919.1| PaxB [Mus musculus]
Length = 387
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 33/45 (73%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT+QQL+ LE TF + YPD+ RE +AM TNL EA
Sbjct: 75 RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEA 119
>gi|355002423|gb|AER51836.1| cone-rod homeobox, partial [Taphozous melanopogon]
Length = 286
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 34/44 (77%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTE 90
++QRR+RT FT QL+ELEA FA+ +YPD+ REE+A+ NL E
Sbjct: 29 RKQRRERTTFTRSQLEELEALFAKTQYPDVYAREEVALKINLPE 72
>gi|355002365|gb|AER51807.1| cone-rod homeobox, partial [Rhinolophus sinicus]
Length = 278
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 34/44 (77%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTE 90
++QRR+RT FT QL+ELEA FA+ +YPD+ REE+A+ NL E
Sbjct: 29 RKQRRERTTFTRSQLEELEALFAKTQYPDVYAREEVALKINLPE 72
>gi|291399413|ref|XP_002716105.1| PREDICTED: paired box 7 [Oryctolagus cuniculus]
Length = 497
Score = 58.9 bits (141), Expect = 4e-07, Method: Composition-based stats.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT++QL+ELE F R YPD+ TREE+A T LTEA
Sbjct: 207 RKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEA 251
>gi|149024435|gb|EDL80932.1| similar to paired box gene 7 isoform 1 (predicted) [Rattus
norvegicus]
Length = 492
Score = 58.9 bits (141), Expect = 4e-07, Method: Composition-based stats.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT++QL+ELE F R YPD+ TREE+A T LTEA
Sbjct: 202 RKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEA 246
>gi|195114566|ref|XP_002001838.1| GI14821 [Drosophila mojavensis]
gi|193912413|gb|EDW11280.1| GI14821 [Drosophila mojavensis]
Length = 617
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 44/70 (62%), Gaps = 2/70 (2%)
Query: 22 SNHNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREE 81
S HN + +D + S K ++QRR RT F++ QL+ELE F R +YPD+ TREE
Sbjct: 178 STHNKATDDEVSDCESEPGIALK--RKQRRCRTTFSAAQLEELERAFERTQYPDIFTREE 235
Query: 82 IAMWTNLTEA 91
+A TNLTEA
Sbjct: 236 LAQRTNLTEA 245
>gi|170587125|ref|XP_001898329.1| Homeobox domain containing protein [Brugia malayi]
gi|158594235|gb|EDP32820.1| Homeobox domain containing protein [Brugia malayi]
Length = 516
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 39/67 (58%)
Query: 25 NDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAM 84
ND S S SNS ++QRR RT F++ QL ELE FAR YPD+ TREE+A
Sbjct: 166 NDFSAXSDRPSSCSNSPEDNGKRKQRRYRTTFSAYQLDELEKVFARTHYPDVFTREELAQ 225
Query: 85 WTNLTEA 91
LTEA
Sbjct: 226 RVILTEA 232
>gi|41581183|emb|CAF02091.1| paired box protein 7 [Salmo salar]
Length = 514
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT++QL+ELE F R YPD+ TREE+A T LTEA
Sbjct: 226 RKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEA 270
>gi|388240434|dbj|BAM15711.1| paired box gene 7 [Scyliorhinus torazame]
Length = 495
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT++QL+ELE F R YPD+ TREE+A T LTEA
Sbjct: 214 RKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEA 258
>gi|355002425|gb|AER51837.1| cone-rod homeobox, partial [Taphozous melanopogon]
Length = 286
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 34/44 (77%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTE 90
++QRR+RT FT QL+ELEA FA+ +YPD+ REE+A+ NL E
Sbjct: 29 RKQRRERTTFTRSQLEELEALFAKTQYPDVYAREEVALKINLPE 72
>gi|355002413|gb|AER51831.1| cone-rod homeobox, partial [Hipposideros larvatus]
Length = 285
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 34/44 (77%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTE 90
++QRR+RT FT QL+ELEA FA+ +YPD+ REE+A+ NL E
Sbjct: 29 RKQRRERTTFTRSQLEELEALFAKTQYPDVYAREEVALKINLPE 72
>gi|355002373|gb|AER51811.1| cone-rod homeobox, partial [Myotis davidii]
gi|355002375|gb|AER51812.1| cone-rod homeobox, partial [Myotis davidii]
Length = 285
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 34/44 (77%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTE 90
++QRR+RT FT QL+ELEA FA+ +YPD+ REE+A+ NL E
Sbjct: 29 RKQRRERTTFTRSQLEELEALFAKTQYPDVYAREEVALKINLPE 72
>gi|24158437|ref|NP_571407.1| paired box 7 isoform 2 [Danio rerio]
gi|2909771|gb|AAC41256.1| transcription factor PAX7D [Danio rerio]
Length = 487
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT++QL+ELE F R YPD+ TREE+A T LTEA
Sbjct: 218 RKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEA 262
>gi|355002455|gb|AER51852.1| cone-rod homeobox, partial [Saccopteryx bilineata]
Length = 285
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 35/45 (77%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR+RT FT QL+ELEA FA+ +YPD+ REE+A+ NL E+
Sbjct: 29 RKQRRERTTFTRSQLEELEALFAKTQYPDVYAREEVALKINLPES 73
>gi|225903375|ref|NP_001139621.1| paired box gene 7b [Danio rerio]
gi|225355242|gb|ACN88553.1| paired box protein 7b [Danio rerio]
Length = 510
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT++QL+ELE F R YPD+ TREE+A T LTEA
Sbjct: 221 RKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEA 265
>gi|444728104|gb|ELW68568.1| Paired box protein Pax-7 [Tupaia chinensis]
Length = 486
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT++QL+ELE F R YPD+ TREE+A T LTEA
Sbjct: 196 RKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEA 240
>gi|25990914|gb|AAN76724.1| Mbx [Mus musculus]
Length = 381
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 33/45 (73%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT+QQL+ LE TF + YPD+ RE +AM TNL EA
Sbjct: 69 RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEA 113
>gi|62955219|ref|NP_001017625.1| diencephalon/mesencephalon homeobox protein 1-B [Danio rerio]
gi|82229939|sp|Q566X8.1|DMX1B_DANRE RecName: Full=Diencephalon/mesencephalon homeobox protein 1-B
gi|62202765|gb|AAH93284.1| Diencephalon/mesencephalon homeobox 1b [Danio rerio]
gi|83779129|gb|ABC47375.1| paired-type homeobox transcription factor Mbx2 [Danio rerio]
gi|182890472|gb|AAI64462.1| Dmbx1b protein [Danio rerio]
Length = 369
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 33/45 (73%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT+QQL+ LE TF + YPD+ RE +AM TNL EA
Sbjct: 64 RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEA 108
>gi|355002457|gb|AER51853.1| cone-rod homeobox, partial [Glossophaga soricina]
Length = 285
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 35/45 (77%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR+RT FT QL+ELEA FA+ +YPD+ REE+A+ NL E+
Sbjct: 29 RKQRRERTTFTRSQLEELEALFAKTQYPDVYAREEVALKINLPES 73
>gi|148681370|gb|EDL13317.1| paired box gene 7 [Mus musculus]
Length = 498
Score = 58.9 bits (141), Expect = 4e-07, Method: Composition-based stats.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT++QL+ELE F R YPD+ TREE+A T LTEA
Sbjct: 208 RKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEA 252
>gi|307197090|gb|EFN78458.1| Segmentation protein paired [Harpegnathos saltator]
Length = 481
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 28 IEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTN 87
++ SS D S T ++QRR RT FT+ QL ELE F R +YPD+ TREE+A T
Sbjct: 110 VKTSSGSDCDSEPGITLK-RKQRRSRTTFTAHQLDELEKAFERTQYPDIYTREELAQRTK 168
Query: 88 LTEA 91
LTEA
Sbjct: 169 LTEA 172
>gi|24158433|ref|NP_571399.1| paired box 7 isoform 4 [Danio rerio]
gi|2909767|gb|AAC41254.1| transcription factor PAX7A [Danio rerio]
Length = 280
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT++QL+ELE F R YPD+ TREE+A T LTEA
Sbjct: 218 RKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEA 262
>gi|355002405|gb|AER51827.1| cone-rod homeobox, partial [Rhinolophus pusillus]
Length = 278
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 35/45 (77%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR+RT FT QL+ELEA FA+ +YPD+ REE+A+ NL E+
Sbjct: 29 RKQRRERTTFTRSQLEELEALFAKTQYPDVYAREEVALKINLPES 73
>gi|355002401|gb|AER51825.1| cone-rod homeobox, partial [Rhinolophus pusillus]
Length = 278
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 34/44 (77%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTE 90
++QRR+RT FT QL+ELEA FA+ +YPD+ REE+A+ NL E
Sbjct: 29 RKQRRERTTFTRSQLEELEALFAKTQYPDVYAREEVALKINLPE 72
>gi|194765997|ref|XP_001965111.1| GF23439 [Drosophila ananassae]
gi|190617721|gb|EDV33245.1| GF23439 [Drosophila ananassae]
Length = 613
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 14 IGNIKTELSNHNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRY 73
G+ + +HN+ D D S ++QRR RT F++ QL ELE F R +Y
Sbjct: 180 CGSDVSGGGHHNNKPSDEDISDCESE-PGIALKRKQRRCRTTFSAAQLDELERAFERTQY 238
Query: 74 PDMSTREEIAMWTNLTEA 91
PD+ TREE+A TNLTEA
Sbjct: 239 PDIYTREELAQRTNLTEA 256
>gi|70909349|ref|NP_001020738.1| diencephalon/mesencephalon homeobox protein 1 isoform b [Mus
musculus]
gi|16903553|gb|AAL30509.1|AF421858_1 paired-like homeobox protein DMBX1 [Mus musculus]
gi|21902328|gb|AAM78514.1|AF499446_1 PRD class homeobox protein [Mus musculus]
gi|30047398|gb|AAH50912.1| Diencephalon/mesencephalon homeobox 1 [Mus musculus]
gi|148698681|gb|EDL30628.1| diencephalon/mesencephalon homeobox 1, isoform CRA_a [Mus musculus]
gi|148698682|gb|EDL30629.1| diencephalon/mesencephalon homeobox 1, isoform CRA_a [Mus musculus]
Length = 376
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 33/45 (73%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT+QQL+ LE TF + YPD+ RE +AM TNL EA
Sbjct: 64 RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEA 108
>gi|170040812|ref|XP_001848180.1| gooseberry [Culex quinquefasciatus]
gi|167864427|gb|EDS27810.1| gooseberry [Culex quinquefasciatus]
Length = 444
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 28 IEDSSAKDSSS--NSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMW 85
+ SSA D S + K +++QRR RT F +QL+ LE FAR +YPD+ TREE+A
Sbjct: 150 VGGSSADDDSDTESEPGLKLNRKQRRSRTTFNGEQLEALEVAFARTQYPDVYTREELAQK 209
Query: 86 TNLTEA 91
T LTEA
Sbjct: 210 TRLTEA 215
>gi|94404551|gb|ABF17938.1| Pax7 variant [Gallus gallus]
Length = 502
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT++QL+ELE F R YPD+ TREE+A T LTEA
Sbjct: 213 RKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEA 257
>gi|431906259|gb|ELK10456.1| Paired box protein Pax-7 [Pteropus alecto]
Length = 342
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT++QL+ELE F R YPD+ TREE+A T LTEA
Sbjct: 52 RKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEA 96
>gi|190339194|gb|AAI63580.1| Pax7a protein [Danio rerio]
Length = 275
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT++QL+ELE F R YPD+ TREE+A T LTEA
Sbjct: 213 RKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEA 257
>gi|70909343|ref|NP_570935.3| diencephalon/mesencephalon homeobox protein 1 isoform a [Mus
musculus]
gi|81916299|sp|Q91ZK4.1|DMBX1_MOUSE RecName: Full=Diencephalon/mesencephalon homeobox protein 1;
AltName: Full=Diencephalon/mesencephalon-expressed brain
homeobox gene 1 protein; AltName: Full=Orthodenticle
homolog 3; AltName: Full=Paired-like homeobox protein
DMBX1; AltName: Full=Paired-type homeobox Atx
gi|16903551|gb|AAL30508.1|AF421857_1 paired-like homeobox protein DMBX1 [Mus musculus]
gi|18390053|gb|AAL68836.1|AF463513_1 cerebellar-diencephalic-mesencephalic homeobox protein [Mus
musculus]
Length = 381
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 33/45 (73%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT+QQL+ LE TF + YPD+ RE +AM TNL EA
Sbjct: 69 RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEA 113
>gi|355002367|gb|AER51808.1| cone-rod homeobox, partial [Rhinolophus sinicus]
gi|355002369|gb|AER51809.1| cone-rod homeobox, partial [Rhinolophus sinicus]
gi|355002379|gb|AER51814.1| cone-rod homeobox, partial [Rhinolophus sinicus]
gi|355002381|gb|AER51815.1| cone-rod homeobox, partial [Rhinolophus sinicus]
gi|355002383|gb|AER51816.1| cone-rod homeobox, partial [Rhinolophus sinicus]
gi|355002385|gb|AER51817.1| cone-rod homeobox, partial [Rhinolophus sinicus]
Length = 278
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 34/44 (77%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTE 90
++QRR+RT FT QL+ELEA FA+ +YPD+ REE+A+ NL E
Sbjct: 29 RKQRRERTTFTRSQLEELEALFAKTQYPDVYAREEVALKINLPE 72
>gi|355002417|gb|AER51833.1| cone-rod homeobox, partial [Hipposideros pomona]
Length = 285
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 34/44 (77%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTE 90
++QRR+RT FT QL+ELEA FA+ +YPD+ REE+A+ NL E
Sbjct: 29 RKQRRERTTFTRGQLEELEALFAKTQYPDVYAREEVALKINLPE 72
>gi|355002391|gb|AER51820.1| cone-rod homeobox, partial [Tylonycteris pachypus]
Length = 270
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 34/44 (77%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTE 90
++QRR+RT FT QL+ELEA FA+ +YPD+ REE+A+ NL E
Sbjct: 29 RKQRRERTTFTRSQLEELEALFAKTQYPDVYAREEVALKINLPE 72
>gi|242007394|ref|XP_002424525.1| Paired box protein Pax-7, putative [Pediculus humanus corporis]
gi|212507958|gb|EEB11787.1| Paired box protein Pax-7, putative [Pediculus humanus corporis]
Length = 439
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 25 NDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAM 84
ND ++S D S ++QRR RT FT+ QL ELE F R +YPD+ TREE+A
Sbjct: 158 NDGCKNSDNSDCESE-PGIPLKRKQRRSRTTFTALQLDELEKAFERTQYPDIYTREELAQ 216
Query: 85 WTNLTEA 91
T LTEA
Sbjct: 217 RTKLTEA 223
>gi|30348975|ref|NP_835457.2| diencephalon/mesencephalon homeobox protein 1-A isoform Mbx-S
[Danio rerio]
gi|22085905|gb|AAM90588.1|AF398526_1 homeoprotein Mbx-S [Danio rerio]
gi|134024855|gb|AAI34895.1| Diencephalon/mesencephalon homeobox 1a [Danio rerio]
Length = 383
Score = 58.5 bits (140), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 33/45 (73%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT+QQL+ LE TF + YPD+ RE +AM TNL EA
Sbjct: 64 RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEA 108
>gi|410924614|ref|XP_003975776.1| PREDICTED: diencephalon/mesencephalon homeobox protein 1-A-like
[Takifugu rubripes]
Length = 387
Score = 58.5 bits (140), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 33/45 (73%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT+QQL+ LE TF + YPD+ RE +AM TNL EA
Sbjct: 64 RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEA 108
>gi|355002471|gb|AER51860.1| cone-rod homeobox, partial [Hipposideros pomona]
Length = 268
Score = 58.5 bits (140), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 34/44 (77%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTE 90
++QRR+RT FT QL+ELEA FA+ +YPD+ REE+A+ NL E
Sbjct: 29 RKQRRERTTFTRGQLEELEALFAKTQYPDVYAREEVALKINLPE 72
>gi|355002397|gb|AER51823.1| cone-rod homeobox, partial [Rhinolophus pearsonii]
Length = 278
Score = 58.5 bits (140), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 35/45 (77%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR+RT FT QL+ELEA FA+ +YPD+ REE+A+ NL E+
Sbjct: 29 RKQRRERTTFTRSQLEELEALFAKTQYPDVYAREEVALKINLPES 73
>gi|345314187|ref|XP_003429473.1| PREDICTED: paired box protein Pax-7-like, partial
[Ornithorhynchus anatinus]
Length = 84
Score = 58.5 bits (140), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT++QL+ELE F R YPD+ TREE+A T LTEA
Sbjct: 20 RKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEA 64
>gi|269785141|ref|NP_001161526.1| diencephalon/mesencephalon homeobox [Saccoglossus kowalevskii]
gi|268054033|gb|ACY92503.1| Dmbx [Saccoglossus kowalevskii]
Length = 375
Score = 58.5 bits (140), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 33/45 (73%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT+QQL LE TFA+ YPD+ RE +AM TNL EA
Sbjct: 62 RKQRRSRTAFTNQQLAALEKTFAKTHYPDVVMRERLAMCTNLPEA 106
>gi|355002399|gb|AER51824.1| cone-rod homeobox, partial [Rhinolophus pusillus]
Length = 278
Score = 58.5 bits (140), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 34/44 (77%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTE 90
++QRR+RT FT QL+ELEA FA+ +YPD+ REE+A+ NL E
Sbjct: 29 RKQRRERTTFTRSQLEELEALFAKTQYPDVYAREEVALKINLPE 72
>gi|32816237|gb|AAP88434.1| PaxB homeobox protein [Nematostella vectensis]
Length = 298
Score = 58.5 bits (140), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 38/54 (70%)
Query: 38 SNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
+ N++ SK RRQRT+FT +Q+++LE F + YPD+ TREE+A NL+EA
Sbjct: 207 GDDPNSQRSKMSRRQRTNFTDEQIEKLEKVFEKTHYPDVFTREELAQQVNLSEA 260
>gi|23308671|ref|NP_694509.1| diencephalon/mesencephalon homeobox protein 1-A isoform Mbx-L
[Danio rerio]
gi|82243528|sp|Q8JI10.1|DMX1A_DANRE RecName: Full=Diencephalon/mesencephalon homeobox protein 1-A;
AltName: Full=Paired homeobox protein 1
gi|22085902|gb|AAM90587.1|AF398525_1 homeoprotein Mbx-L [Danio rerio]
gi|27475512|gb|AAL58532.1| paired homeobox protein [Danio rerio]
Length = 388
Score = 58.5 bits (140), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 33/45 (73%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT+QQL+ LE TF + YPD+ RE +AM TNL EA
Sbjct: 69 RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEA 113
>gi|355002439|gb|AER51844.1| cone-rod homeobox, partial [Noctilio leporinus]
Length = 285
Score = 58.5 bits (140), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 35/45 (77%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR+RT FT QL+ELEA FA+ +YPD+ REE+A+ NL E+
Sbjct: 29 RKQRRERTTFTRSQLEELEALFAKTQYPDVYAREEVALKINLPES 73
>gi|355002437|gb|AER51843.1| cone-rod homeobox, partial [Chaerephon plicatus]
Length = 266
Score = 58.5 bits (140), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 35/45 (77%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR+RT FT QL+ELEA FA+ +YPD+ REE+A+ NL E+
Sbjct: 29 RKQRRERTTFTRNQLEELEALFAKTQYPDVYAREEVALKINLPES 73
>gi|355002421|gb|AER51835.1| cone-rod homeobox, partial [Hipposideros armiger]
Length = 285
Score = 58.5 bits (140), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 34/44 (77%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTE 90
++QRR+RT FT QL+ELEA FA+ +YPD+ REE+A+ NL E
Sbjct: 29 RKQRRERTTFTRSQLEELEALFAKTQYPDVYAREEVALRINLPE 72
>gi|351711411|gb|EHB14330.1| Diencephalon/mesencephalon homeobox protein 1 [Heterocephalus
glaber]
Length = 379
Score = 58.5 bits (140), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 33/45 (73%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT+QQL+ LE TF + YPD+ RE +AM TNL EA
Sbjct: 70 RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEA 114
>gi|348553433|ref|XP_003462531.1| PREDICTED: diencephalon/mesencephalon homeobox protein 1 isoform 2
[Cavia porcellus]
Length = 377
Score = 58.5 bits (140), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 33/45 (73%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT+QQL+ LE TF + YPD+ RE +AM TNL EA
Sbjct: 69 RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEA 113
>gi|195433002|ref|XP_002064504.1| GK23788 [Drosophila willistoni]
gi|194160589|gb|EDW75490.1| GK23788 [Drosophila willistoni]
Length = 375
Score = 58.5 bits (140), Expect = 4e-07, Method: Composition-based stats.
Identities = 31/64 (48%), Positives = 44/64 (68%), Gaps = 2/64 (3%)
Query: 30 DSSAKDSSSNSKNTKNS--KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTN 87
+S D++S+ + + + ++QRR RT FTS QL+ELE F+R YPD+ TREE+AM
Sbjct: 48 NSPISDANSDCETDEYAPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAMKIG 107
Query: 88 LTEA 91
LTEA
Sbjct: 108 LTEA 111
>gi|350580147|ref|XP_003480752.1| PREDICTED: hypothetical protein LOC100738855, partial [Sus scrofa]
Length = 397
Score = 58.5 bits (140), Expect = 4e-07, Method: Composition-based stats.
Identities = 29/66 (43%), Positives = 42/66 (63%), Gaps = 3/66 (4%)
Query: 29 EDSSAKDSSS---NSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMW 85
+D ++ D S + + N ++RR RT FTS QL+ELE F + YPD+ RE++AM
Sbjct: 329 QDRASADLPSPLEKADSESNKGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMR 388
Query: 86 TNLTEA 91
T+LTEA
Sbjct: 389 TDLTEA 394
>gi|301603585|ref|XP_002931449.1| PREDICTED: diencephalon/mesencephalon homeobox protein 1-B-like
isoform 1 [Xenopus (Silurana) tropicalis]
Length = 362
Score = 58.5 bits (140), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 33/45 (73%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT+QQL+ LE TF + YPD+ RE +AM TNL EA
Sbjct: 64 RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEA 108
>gi|157818253|ref|NP_001101431.1| diencephalon/mesencephalon homeobox 1 [Rattus norvegicus]
gi|149035616|gb|EDL90297.1| diencephalon/mesencephalon homeobox 1 (predicted), isoform CRA_a
[Rattus norvegicus]
gi|149035617|gb|EDL90298.1| diencephalon/mesencephalon homeobox 1 (predicted), isoform CRA_a
[Rattus norvegicus]
Length = 376
Score = 58.5 bits (140), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 33/45 (73%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT+QQL+ LE TF + YPD+ RE +AM TNL EA
Sbjct: 64 RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEA 108
>gi|355002371|gb|AER51810.1| cone-rod homeobox, partial [Rhinolophus sinicus]
Length = 278
Score = 58.5 bits (140), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 34/44 (77%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTE 90
++QRR+RT FT QL+ELEA FA+ +YPD+ REE+A+ NL E
Sbjct: 29 RKQRRERTTFTRSQLEELEALFAKTQYPDVYAREEVALKINLPE 72
>gi|47228289|emb|CAG07684.1| unnamed protein product [Tetraodon nigroviridis]
Length = 440
Score = 58.5 bits (140), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 46/78 (58%), Gaps = 6/78 (7%)
Query: 14 IGNIKTELSNHNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRY 73
I I + S+H+D D+S DS ++QRR RT FT++QL+ELE F R Y
Sbjct: 148 IDGILGDRSSHSD---DTSDVDSE---PGLPLKRKQRRSRTTFTAEQLEELERAFERTHY 201
Query: 74 PDMSTREEIAMWTNLTEA 91
PD+ TREE+A LTEA
Sbjct: 202 PDIYTREEVAQRAKLTEA 219
>gi|355002445|gb|AER51847.1| cone-rod homeobox, partial [Sturnira lilium]
Length = 285
Score = 58.5 bits (140), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 34/44 (77%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTE 90
++QRR+RT FT QL+ELEA FA+ +YPD+ REE+A+ NL E
Sbjct: 29 RKQRRERTTFTRSQLEELEALFAKTQYPDVYAREEVALKINLPE 72
>gi|355002393|gb|AER51821.1| cone-rod homeobox, partial [Tylonycteris robustula]
Length = 269
Score = 58.5 bits (140), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 34/44 (77%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTE 90
++QRR+RT FT QL+ELEA FA+ +YPD+ REE+A+ NL E
Sbjct: 28 RKQRRERTTFTRSQLEELEALFAKTQYPDVYAREEVALKINLPE 71
>gi|332219857|ref|XP_003259074.1| PREDICTED: diencephalon/mesencephalon homeobox protein 1 isoform 2
[Nomascus leucogenys]
Length = 382
Score = 58.5 bits (140), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 33/45 (73%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT+QQL+ LE TF + YPD+ RE +AM TNL EA
Sbjct: 69 RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEA 113
>gi|332219855|ref|XP_003259073.1| PREDICTED: diencephalon/mesencephalon homeobox protein 1 isoform 1
[Nomascus leucogenys]
Length = 377
Score = 58.5 bits (140), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 33/45 (73%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT+QQL+ LE TF + YPD+ RE +AM TNL EA
Sbjct: 64 RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEA 108
>gi|301603587|ref|XP_002931450.1| PREDICTED: diencephalon/mesencephalon homeobox protein 1-B-like
isoform 2 [Xenopus (Silurana) tropicalis]
Length = 367
Score = 58.5 bits (140), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 33/45 (73%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT+QQL+ LE TF + YPD+ RE +AM TNL EA
Sbjct: 69 RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEA 113
>gi|351697963|gb|EHB00882.1| Cone-rod homeobox protein [Heterocephalus glaber]
Length = 299
Score = 58.5 bits (140), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 35/45 (77%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR+RT FT QL+ELEA FA+ +YPD+ REE+A+ NL E+
Sbjct: 37 RKQRRERTTFTRSQLEELEALFAKTQYPDVYAREEVALKINLPES 81
>gi|407025361|gb|AFS65547.1| Alx1, partial [Parastichopus parvimensis]
Length = 311
Score = 58.5 bits (140), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 44/70 (62%)
Query: 22 SNHNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREE 81
S+ D+ + S KD NS + +++RR RT FTS QL+E+E F R YPD+ RE+
Sbjct: 83 SDDPDNDDARSEKDDGKNSGGDDSKRKKRRNRTTFTSFQLEEMEKVFQRTHYPDVYMREQ 142
Query: 82 IAMWTNLTEA 91
+A+ +LTEA
Sbjct: 143 LALRCDLTEA 152
>gi|355002473|gb|AER51861.1| cone-rod homeobox, partial [Rousettus leschenaultii]
Length = 268
Score = 58.5 bits (140), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 34/44 (77%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTE 90
++QRR+RT FT QL+ELEA FA+ +YPD+ REE+A+ NL E
Sbjct: 29 RKQRRERTTFTRSQLEELEALFAKTQYPDVYAREEVALKINLPE 72
>gi|344269934|ref|XP_003406802.1| PREDICTED: cone-rod homeobox protein-like [Loxodonta africana]
Length = 299
Score = 58.5 bits (140), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 35/45 (77%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR+RT FT QL+ELEA FA+ +YPD+ REE+A+ NL E+
Sbjct: 37 RKQRRERTTFTRSQLEELEALFAKTQYPDVYAREEVALKINLPES 81
>gi|326925298|ref|XP_003208854.1| PREDICTED: diencephalon/mesencephalon homeobox protein 1-B-like
isoform 1 [Meleagris gallopavo]
Length = 367
Score = 58.5 bits (140), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 33/45 (73%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT+QQL+ LE TF + YPD+ RE +AM TNL EA
Sbjct: 69 RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEA 113
>gi|289583665|gb|ADD10737.1| cone-rod homeobox protein [Felis catus]
gi|289583667|gb|ADD10738.1| cone-rod homeobox protein [Felis catus]
Length = 299
Score = 58.5 bits (140), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 35/45 (77%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR+RT FT QL+ELEA FA+ +YPD+ REE+A+ NL E+
Sbjct: 37 RKQRRERTTFTRSQLEELEALFAKTQYPDVYAREEVALKINLPES 81
>gi|432913637|ref|XP_004078989.1| PREDICTED: diencephalon/mesencephalon homeobox protein 1-A-like
[Oryzias latipes]
Length = 389
Score = 58.5 bits (140), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 33/45 (73%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT+QQL+ LE TF + YPD+ RE +AM TNL EA
Sbjct: 64 RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEA 108
>gi|21623546|dbj|BAC00920.1| PaxB [Homo sapiens]
Length = 382
Score = 58.5 bits (140), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 33/45 (73%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT+QQL+ LE TF + YPD+ RE +AM TNL EA
Sbjct: 69 RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEA 113
>gi|355002467|gb|AER51858.1| cone-rod homeobox, partial [Rousettus leschenaultii]
Length = 285
Score = 58.5 bits (140), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 34/44 (77%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTE 90
++QRR+RT FT QL+ELEA FA+ +YPD+ REE+A+ NL E
Sbjct: 29 RKQRRERTTFTRSQLEELEALFAKTQYPDVYAREEVALKINLPE 72
>gi|328788663|ref|XP_001120833.2| PREDICTED: paired mesoderm homeobox protein 2B [Apis mellifera]
Length = 196
Score = 58.5 bits (140), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 33/45 (73%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FTS QL+ELE F YPD+ TREEIAM +LTEA
Sbjct: 136 RKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEA 180
>gi|449275903|gb|EMC84639.1| Paired box protein Pax-7 [Columba livia]
Length = 524
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT++QL+ELE F R YPD+ TREE+A T LTEA
Sbjct: 213 RKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEA 257
>gi|426329500|ref|XP_004025778.1| PREDICTED: diencephalon/mesencephalon homeobox protein 1 isoform 2
[Gorilla gorilla gorilla]
Length = 384
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 33/45 (73%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT+QQL+ LE TF + YPD+ RE +AM TNL EA
Sbjct: 69 RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEA 113
>gi|395854249|ref|XP_003799610.1| PREDICTED: cone-rod homeobox protein [Otolemur garnettii]
Length = 299
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 35/45 (77%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR+RT FT QL+ELEA FA+ +YPD+ REE+A+ NL E+
Sbjct: 37 RKQRRERTTFTRSQLEELEALFAKTQYPDVYAREEVALKINLPES 81
>gi|348501013|ref|XP_003438065.1| PREDICTED: diencephalon/mesencephalon homeobox protein 1-A-like
[Oreochromis niloticus]
Length = 390
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 33/45 (73%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT+QQL+ LE TF + YPD+ RE +AM TNL EA
Sbjct: 64 RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEA 108
>gi|332808877|ref|XP_003308127.1| PREDICTED: diencephalon/mesencephalon homeobox protein 1 isoform 1
[Pan troglodytes]
gi|397483205|ref|XP_003812794.1| PREDICTED: diencephalon/mesencephalon homeobox protein 1 isoform 2
[Pan paniscus]
Length = 382
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 33/45 (73%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT+QQL+ LE TF + YPD+ RE +AM TNL EA
Sbjct: 69 RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEA 113
>gi|326925300|ref|XP_003208855.1| PREDICTED: diencephalon/mesencephalon homeobox protein 1-B-like
isoform 2 [Meleagris gallopavo]
Length = 362
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 33/45 (73%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT+QQL+ LE TF + YPD+ RE +AM TNL EA
Sbjct: 64 RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEA 108
>gi|301765101|ref|XP_002917928.1| PREDICTED: cone-rod homeobox protein-like [Ailuropoda
melanoleuca]
gi|281348410|gb|EFB23994.1| hypothetical protein PANDA_006338 [Ailuropoda melanoleuca]
Length = 299
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 35/45 (77%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR+RT FT QL+ELEA FA+ +YPD+ REE+A+ NL E+
Sbjct: 37 RKQRRERTTFTRSQLEELEALFAKTQYPDVYAREEVALKINLPES 81
>gi|22218349|ref|NP_671725.1| diencephalon/mesencephalon homeobox protein 1 isoform b [Homo
sapiens]
gi|74762571|sp|Q8NFW5.1|DMBX1_HUMAN RecName: Full=Diencephalon/mesencephalon homeobox protein 1;
AltName: Full=Orthodenticle homolog 3; AltName:
Full=Paired-like homeobox protein DMBX1
gi|22085911|gb|AAM90590.1|AF398528_1 homeoprotein MBX-L [Homo sapiens]
gi|162318062|gb|AAI56882.1| Diencephalon/mesencephalon homeobox 1 [synthetic construct]
gi|162319248|gb|AAI56065.1| Diencephalon/mesencephalon homeobox 1 [synthetic construct]
Length = 382
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 33/45 (73%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT+QQL+ LE TF + YPD+ RE +AM TNL EA
Sbjct: 69 RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEA 113
>gi|432104477|gb|ELK31095.1| Diencephalon/mesencephalon homeobox protein 1 [Myotis davidii]
Length = 378
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 33/45 (73%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT+QQL+ LE TF + YPD+ RE +AM TNL EA
Sbjct: 64 RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEA 108
>gi|426329498|ref|XP_004025777.1| PREDICTED: diencephalon/mesencephalon homeobox protein 1 isoform 1
[Gorilla gorilla gorilla]
Length = 379
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 33/45 (73%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT+QQL+ LE TF + YPD+ RE +AM TNL EA
Sbjct: 64 RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEA 108
>gi|45384216|ref|NP_990396.1| paired box protein Pax-7 [Gallus gallus]
gi|2576239|dbj|BAA23005.1| PAX7 protein [Gallus gallus]
Length = 524
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT++QL+ELE F R YPD+ TREE+A T LTEA
Sbjct: 213 RKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEA 257
>gi|355703714|gb|EHH30205.1| hypothetical protein EGK_10822 [Macaca mulatta]
Length = 299
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 35/45 (77%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR+RT FT QL+ELEA FA+ +YPD+ REE+A+ NL E+
Sbjct: 37 RKQRRERTTFTRSQLEELEALFAKTQYPDVYAREEVALKINLPES 81
>gi|348553431|ref|XP_003462530.1| PREDICTED: diencephalon/mesencephalon homeobox protein 1 isoform 1
[Cavia porcellus]
Length = 372
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 33/45 (73%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT+QQL+ LE TF + YPD+ RE +AM TNL EA
Sbjct: 64 RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEA 108
>gi|126343736|ref|XP_001379904.1| PREDICTED: paired box protein Pax-7-like, partial [Monodelphis
domestica]
Length = 309
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT++QL+ELE F R YPD+ TREE+A T LTEA
Sbjct: 19 RKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEA 63
>gi|118094490|ref|XP_001234036.1| PREDICTED: diencephalon/mesencephalon homeobox protein 1-B isoform
1 [Gallus gallus]
Length = 362
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 33/45 (73%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT+QQL+ LE TF + YPD+ RE +AM TNL EA
Sbjct: 64 RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEA 108
>gi|431896854|gb|ELK06118.1| Diencephalon/mesencephalon homeobox protein 1 [Pteropus alecto]
Length = 407
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 33/45 (73%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT+QQL+ LE TF + YPD+ RE +AM TNL EA
Sbjct: 99 RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEA 143
>gi|224058107|ref|XP_002195953.1| PREDICTED: diencephalon/mesencephalon homeobox protein 1-B-like
isoform 2 [Taeniopygia guttata]
Length = 362
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 33/45 (73%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT+QQL+ LE TF + YPD+ RE +AM TNL EA
Sbjct: 64 RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEA 108
>gi|118094492|ref|XP_422451.2| PREDICTED: diencephalon/mesencephalon homeobox protein 1-B isoform
2 [Gallus gallus]
Length = 367
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 33/45 (73%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT+QQL+ LE TF + YPD+ RE +AM TNL EA
Sbjct: 69 RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEA 113
>gi|17506283|ref|NP_491393.1| Protein CEH-17 [Caenorhabditis elegans]
gi|8515894|gb|AAF76229.1|AF272397_1 CEH-17 [Caenorhabditis elegans]
gi|351059719|emb|CCD67311.1| Protein CEH-17 [Caenorhabditis elegans]
Length = 237
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 35/50 (70%)
Query: 42 NTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
N ++QRR RT FTS QL+ELE +F YPD+ TREEIAM +LTEA
Sbjct: 142 NPAERRKQRRIRTTFTSGQLKELERSFCETHYPDIYTREEIAMRIDLTEA 191
>gi|403291750|ref|XP_003936930.1| PREDICTED: diencephalon/mesencephalon homeobox protein 1 [Saimiri
boliviensis boliviensis]
Length = 378
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 33/45 (73%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT+QQL+ LE TF + YPD+ RE +AM TNL EA
Sbjct: 64 RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEA 108
>gi|355002463|gb|AER51856.1| cone-rod homeobox, partial [Cynopterus sphinx]
Length = 285
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 35/45 (77%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR+RT FT QL+ELEA FA+ +YPD+ REE+A+ NL E+
Sbjct: 29 RKQRRERTTFTRSQLEELEALFAKTQYPDVYAREEVALKINLPES 73
>gi|117606393|ref|NP_001071090.1| paired [Tribolium castaneum]
gi|115498171|gb|ABD63009.2| paired [Tribolium castaneum]
Length = 414
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 49/85 (57%), Gaps = 13/85 (15%)
Query: 20 ELSNHNDSI-EDSSA---KDSSSNSKNTKNS---------KRQRRQRTHFTSQQLQELEA 66
E S N +I ED A KD S++++ + ++QRR RT FT+ QL ELE
Sbjct: 178 EFSVTNPTIKEDFCAVLWKDKSTDNEGVSDCDSEPGIPLKRKQRRSRTTFTAHQLDELEK 237
Query: 67 TFARNRYPDMSTREEIAMWTNLTEA 91
F R +YPD+ TREE+A T LTEA
Sbjct: 238 AFERTQYPDIYTREELAQRTKLTEA 262
>gi|355002461|gb|AER51855.1| cone-rod homeobox, partial [Cynopterus sphinx]
Length = 285
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 34/44 (77%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTE 90
++QRR+RT FT QL+ELEA FA+ +YPD+ REE+A+ NL E
Sbjct: 29 RKQRRERTTFTRSQLEELEALFAKTQYPDVYAREEVALKINLPE 72
>gi|355002449|gb|AER51849.1| cone-rod homeobox, partial [Lonchophylla thomasi]
Length = 285
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 34/44 (77%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTE 90
++QRR+RT FT QL+ELEA FA+ +YPD+ REE+A+ NL E
Sbjct: 29 RKQRRERTTFTRSQLEELEALFAKTQYPDVYAREEVALKINLPE 72
>gi|344278734|ref|XP_003411147.1| PREDICTED: diencephalon/mesencephalon homeobox protein 1-like
isoform 1 [Loxodonta africana]
Length = 382
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 33/45 (73%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT+QQL+ LE TF + YPD+ RE +AM TNL EA
Sbjct: 69 RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEA 113
>gi|444731497|gb|ELW71850.1| Paired mesoderm homeobox protein 2A [Tupaia chinensis]
Length = 317
Score = 58.5 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FTS QL+ELE FA YPD+ TREE+A+ +LTEA
Sbjct: 156 RKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEA 200
>gi|27436936|ref|NP_757379.1| diencephalon/mesencephalon homeobox protein 1 isoform a [Homo
sapiens]
gi|22085908|gb|AAM90589.1|AF398527_1 homeoprotein MBX-S [Homo sapiens]
gi|119627312|gb|EAX06907.1| diencephalon/mesencephalon homeobox 1 [Homo sapiens]
gi|261858964|dbj|BAI46004.1| diencephalon/mesencephalon homeobox 1 [synthetic construct]
Length = 377
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 33/45 (73%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT+QQL+ LE TF + YPD+ RE +AM TNL EA
Sbjct: 64 RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEA 108
>gi|125809508|ref|XP_001361148.1| GA15432 [Drosophila pseudoobscura pseudoobscura]
gi|195154827|ref|XP_002018314.1| GL16831 [Drosophila persimilis]
gi|54636322|gb|EAL25725.1| GA15432 [Drosophila pseudoobscura pseudoobscura]
gi|194114110|gb|EDW36153.1| GL16831 [Drosophila persimilis]
Length = 461
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 35/45 (77%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT++QL+ LE FAR +YPD+ TREE+A T LTEA
Sbjct: 180 RKQRRSRTTFTAEQLEALERAFARTQYPDVYTREELAQTTALTEA 224
>gi|449266387|gb|EMC77440.1| Diencephalon/mesencephalon homeobox protein 1-B [Columba livia]
Length = 362
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 33/45 (73%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT+QQL+ LE TF + YPD+ RE +AM TNL EA
Sbjct: 64 RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEA 108
>gi|355002447|gb|AER51848.1| cone-rod homeobox, partial [Micronycteris nicefori]
Length = 281
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 35/45 (77%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR+RT FT QL+ELEA FA+ +YPD+ REE+A+ NL E+
Sbjct: 29 RKQRRERTTFTRSQLEELEALFAKTQYPDVYAREEVALKINLPES 73
>gi|332808875|ref|XP_524575.3| PREDICTED: diencephalon/mesencephalon homeobox protein 1 isoform 2
[Pan troglodytes]
gi|397483203|ref|XP_003812793.1| PREDICTED: diencephalon/mesencephalon homeobox protein 1 isoform 1
[Pan paniscus]
Length = 377
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 33/45 (73%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT+QQL+ LE TF + YPD+ RE +AM TNL EA
Sbjct: 64 RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEA 108
>gi|190337567|gb|AAI63492.1| Paired box gene 7a [Danio rerio]
Length = 395
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT++QL+ELE F R YPD+ TREE+A T LTEA
Sbjct: 218 RKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEA 262
>gi|24158480|ref|NP_571401.1| paired box 7 isoform 3 [Danio rerio]
gi|2909773|gb|AAC41257.1| transcription factor PAX7E [Danio rerio]
Length = 395
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT++QL+ELE F R YPD+ TREE+A T LTEA
Sbjct: 218 RKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEA 262
>gi|344278736|ref|XP_003411148.1| PREDICTED: diencephalon/mesencephalon homeobox protein 1-like
isoform 2 [Loxodonta africana]
Length = 377
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 33/45 (73%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT+QQL+ LE TF + YPD+ RE +AM TNL EA
Sbjct: 64 RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEA 108
>gi|117650669|gb|ABK54280.1| Pax3/7 [Branchiostoma belcheri]
Length = 470
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/60 (53%), Positives = 39/60 (65%), Gaps = 1/60 (1%)
Query: 33 AKDSSSNSKNTKNSKR-QRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
+DS +S+ KR QRR RT FT +QL+ELE F R YPD+ TREE+A T LTEA
Sbjct: 177 GEDSDCDSEPDLPLKRKQRRSRTTFTPEQLEELEKAFERTHYPDIYTREELAQRTKLTEA 236
>gi|444730645|gb|ELW71020.1| Cone-rod homeobox protein [Tupaia chinensis]
Length = 315
Score = 58.5 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 25/45 (55%), Positives = 35/45 (77%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR+RT FT QL+ELEA FA+ +YPD+ REE+A+ NL E+
Sbjct: 53 RKQRRERTTFTRSQLEELEALFAKTQYPDVYAREEVALKINLPES 97
>gi|47223503|emb|CAF97990.1| unnamed protein product [Tetraodon nigroviridis]
Length = 610
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 42/68 (61%)
Query: 24 HNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIA 83
H + S + S+++ ++QRR RT FTS QL+ELE F + YPD+ TREE+A
Sbjct: 244 HYPDVFTSVCLSAGSDTEEGMLKRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELA 303
Query: 84 MWTNLTEA 91
M +LTEA
Sbjct: 304 MRLDLTEA 311
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 37/64 (57%)
Query: 29 EDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNL 88
EDS + S+++ ++QRR RT FTS QL+ELE F + YPD+ T ++ ++
Sbjct: 201 EDSVCLSAGSDTEEGMLKRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTSVCLSAGSDT 260
Query: 89 TEAL 92
E +
Sbjct: 261 EEGM 264
>gi|395858212|ref|XP_003801467.1| PREDICTED: diencephalon/mesencephalon homeobox protein 1 [Otolemur
garnettii]
Length = 379
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 33/45 (73%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT+QQL+ LE TF + YPD+ RE +AM TNL EA
Sbjct: 64 RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEA 108
>gi|311259384|ref|XP_003128068.1| PREDICTED: diencephalon/mesencephalon homeobox protein 1-like
isoform 1 [Sus scrofa]
Length = 384
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 33/45 (73%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT+QQL+ LE TF + YPD+ RE +AM TNL EA
Sbjct: 69 RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEA 113
>gi|335291547|ref|XP_003356526.1| PREDICTED: diencephalon/mesencephalon homeobox protein 1-like [Sus
scrofa]
Length = 379
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 33/45 (73%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT+QQL+ LE TF + YPD+ RE +AM TNL EA
Sbjct: 64 RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEA 108
>gi|440907315|gb|ELR57475.1| Diencephalon/mesencephalon homeobox protein 1 [Bos grunniens mutus]
Length = 380
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 33/45 (73%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT+QQL+ LE TF + YPD+ RE +AM TNL EA
Sbjct: 70 RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEA 114
>gi|402854421|ref|XP_003891868.1| PREDICTED: diencephalon/mesencephalon homeobox protein 1 [Papio
anubis]
Length = 377
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 33/45 (73%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT+QQL+ LE TF + YPD+ RE +AM TNL EA
Sbjct: 64 RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEA 108
>gi|149693672|ref|XP_001495012.1| PREDICTED: diencephalon/mesencephalon homeobox protein 1-like
isoform 1 [Equus caballus]
Length = 377
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 33/45 (73%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT+QQL+ LE TF + YPD+ RE +AM TNL EA
Sbjct: 64 RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEA 108
>gi|56785870|gb|AAW29067.1| homeodomain transcription factor PaxB [Nematostella vectensis]
Length = 525
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 42/64 (65%), Gaps = 2/64 (3%)
Query: 30 DSSAKDSS--SNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTN 87
DS+ S + N++ SK RRQRT+FT +Q+++LE F + YPD+ TREE+A N
Sbjct: 205 DSTGSHSGDEGDDPNSQRSKMSRRQRTNFTDEQIEKLEKVFEKTHYPDVFTREELAQQVN 264
Query: 88 LTEA 91
L+EA
Sbjct: 265 LSEA 268
>gi|410967185|ref|XP_003990102.1| PREDICTED: diencephalon/mesencephalon homeobox protein 1 isoform 1
[Felis catus]
Length = 374
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 33/45 (73%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT+QQL+ LE TF + YPD+ RE +AM TNL EA
Sbjct: 64 RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEA 108
>gi|297278622|ref|XP_001098052.2| PREDICTED: diencephalon/mesencephalon homeobox protein 1-like
[Macaca mulatta]
gi|355557967|gb|EHH14747.1| hypothetical protein EGK_00718 [Macaca mulatta]
gi|355745257|gb|EHH49882.1| hypothetical protein EGM_00614 [Macaca fascicularis]
Length = 382
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 33/45 (73%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT+QQL+ LE TF + YPD+ RE +AM TNL EA
Sbjct: 69 RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEA 113
>gi|296488955|tpg|DAA31068.1| TPA: diencephalon/mesencephalon homeobox 1-like isoform 2 [Bos
taurus]
Length = 379
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 33/45 (73%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT+QQL+ LE TF + YPD+ RE +AM TNL EA
Sbjct: 69 RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEA 113
>gi|424034|pir||A46403 transcription factor with prd-type homeo domain and Pro/ Gln-rich
domain al - fruit fly (Drosophila melanogaster)
Length = 384
Score = 58.5 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 28/45 (62%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FTS QL+ELE F+R YPD+ TREE+AM LTEA
Sbjct: 83 RKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAMKIGLTEA 127
>gi|395730561|ref|XP_002810927.2| PREDICTED: diencephalon/mesencephalon homeobox protein 1 [Pongo
abelii]
Length = 377
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 33/45 (73%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT+QQL+ LE TF + YPD+ RE +AM TNL EA
Sbjct: 64 RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEA 108
>gi|355002427|gb|AER51838.1| cone-rod homeobox, partial [Myotis ricketti]
Length = 285
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 34/44 (77%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTE 90
++QRR+RT FT QL+ELEA FA+ +YPD+ REE+A+ NL E
Sbjct: 29 RKQRRERTTFTRSQLEELEALFAKTQYPDVYAREEVALKINLPE 72
>gi|149693674|ref|XP_001495032.1| PREDICTED: diencephalon/mesencephalon homeobox protein 1-like
isoform 2 [Equus caballus]
Length = 382
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 33/45 (73%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT+QQL+ LE TF + YPD+ RE +AM TNL EA
Sbjct: 69 RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEA 113
>gi|385862194|ref|NP_001178121.2| diencephalon/mesencephalon homeobox protein 1 [Bos taurus]
gi|296488954|tpg|DAA31067.1| TPA: diencephalon/mesencephalon homeobox 1-like isoform 1 [Bos
taurus]
Length = 374
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 33/45 (73%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT+QQL+ LE TF + YPD+ RE +AM TNL EA
Sbjct: 64 RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEA 108
>gi|27806903|ref|NP_776329.1| cone-rod homeobox protein [Bos taurus]
gi|13626175|sp|Q9XSK0.1|CRX_BOVIN RecName: Full=Cone-rod homeobox protein
gi|4960212|gb|AAD34645.1|AF154123_1 cone-rod homeobox [Bos taurus]
gi|296477398|tpg|DAA19513.1| TPA: cone-rod homeobox protein [Bos taurus]
Length = 299
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 35/45 (77%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR+RT FT QL+ELEA FA+ +YPD+ REE+A+ NL E+
Sbjct: 37 RKQRRERTTFTRSQLEELEALFAKTQYPDVYAREEVALKINLPES 81
>gi|449273455|gb|EMC82949.1| Paired mesoderm homeobox protein 2B [Columba livia]
Length = 149
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FTS QL+ELE FA YPD+ TREE+A+ +LTEA
Sbjct: 96 RKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEA 140
>gi|440892621|gb|ELR45732.1| Cone-rod homeobox protein [Bos grunniens mutus]
Length = 306
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 35/45 (77%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR+RT FT QL+ELEA FA+ +YPD+ REE+A+ NL E+
Sbjct: 44 RKQRRERTTFTRSQLEELEALFAKTQYPDVYAREEVALKINLPES 88
>gi|410967187|ref|XP_003990103.1| PREDICTED: diencephalon/mesencephalon homeobox protein 1 isoform 2
[Felis catus]
Length = 379
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 33/45 (73%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT+QQL+ LE TF + YPD+ RE +AM TNL EA
Sbjct: 69 RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEA 113
>gi|50978700|ref|NP_001003049.1| cone-rod homeobox protein [Canis lupus familiaris]
gi|42558891|sp|Q8SQ03.1|CRX_CANFA RecName: Full=Cone-rod homeobox protein
gi|19568248|gb|AAL91721.1|AF454668_1 photoreceptor-specific cone-rod homeobox protein [Canis lupus
familiaris]
gi|23197568|emb|CAD45642.1| cone-rod homeobox protein [Canis lupus familiaris]
Length = 299
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 35/45 (77%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR+RT FT QL+ELEA FA+ +YPD+ REE+A+ NL E+
Sbjct: 37 RKQRRERTTFTRSQLEELEALFAKTQYPDVYAREEVALKINLPES 81
>gi|345780839|ref|XP_003432043.1| PREDICTED: diencephalon/mesencephalon homeobox protein 1 isoform 1
[Canis lupus familiaris]
Length = 378
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 33/45 (73%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT+QQL+ LE TF + YPD+ RE +AM TNL EA
Sbjct: 69 RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEA 113
>gi|291398972|ref|XP_002715167.1| PREDICTED: diencephalon/mesencephalon homeobox 1 isoform 1
[Oryctolagus cuniculus]
Length = 377
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 33/45 (73%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT+QQL+ LE TF + YPD+ RE +AM TNL EA
Sbjct: 64 RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEA 108
>gi|332017592|gb|EGI58292.1| Protein gooseberry-neuro [Acromyrmex echinatior]
Length = 302
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 41/61 (67%), Gaps = 1/61 (1%)
Query: 32 SAKDSSSNSKNTKNSKR-QRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTE 90
DS + S+ KR QRR RT FTS+QL++LEA F R +YPD+ +REE+A T LTE
Sbjct: 26 CGDDSDTESEPGLQLKRKQRRSRTTFTSEQLEQLEAAFQRAQYPDVYSREELAQRTGLTE 85
Query: 91 A 91
A
Sbjct: 86 A 86
>gi|113120201|gb|ABI30248.1| PaxD2 [Nematostella vectensis]
Length = 364
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/46 (56%), Positives = 35/46 (76%)
Query: 46 SKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
+++QRR RT FTS+Q+ ELE F + +YPD+ TREE+A NLTEA
Sbjct: 255 TRKQRRSRTKFTSKQVDELEKAFLKTQYPDVYTREELAQRLNLTEA 300
>gi|26342783|dbj|BAC35048.1| unnamed protein product [Mus musculus]
Length = 192
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/52 (57%), Positives = 38/52 (73%), Gaps = 3/52 (5%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA---LRET 95
++QRR RT FTS QL+ELE FA YPD+ TREE+A+ +LTEA +RET
Sbjct: 96 RKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVRET 147
>gi|149574597|ref|XP_001510717.1| PREDICTED: diencephalon/mesencephalon homeobox protein 1-like
[Ornithorhynchus anatinus]
Length = 362
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 33/45 (73%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT+QQL+ LE TF + YPD+ RE +AM TNL EA
Sbjct: 63 RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEA 107
>gi|348557712|ref|XP_003464663.1| PREDICTED: cone-rod homeobox protein-like isoform 1 [Cavia
porcellus]
gi|348557714|ref|XP_003464664.1| PREDICTED: cone-rod homeobox protein-like isoform 2 [Cavia
porcellus]
Length = 301
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 35/45 (77%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR+RT FT QL+ELEA FA+ +YPD+ REE+A+ NL E+
Sbjct: 37 RKQRRERTTFTRSQLEELEALFAKTQYPDVYAREEVALKINLPES 81
>gi|291398974|ref|XP_002715168.1| PREDICTED: diencephalon/mesencephalon homeobox 1 isoform 2
[Oryctolagus cuniculus]
Length = 382
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 33/45 (73%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT+QQL+ LE TF + YPD+ RE +AM TNL EA
Sbjct: 69 RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEA 113
>gi|156401143|ref|XP_001639151.1| predicted protein [Nematostella vectensis]
gi|156226277|gb|EDO47088.1| predicted protein [Nematostella vectensis]
Length = 525
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 42/64 (65%), Gaps = 2/64 (3%)
Query: 30 DSSAKDSS--SNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTN 87
DS+ S + N++ SK RRQRT+FT +Q+++LE F + YPD+ TREE+A N
Sbjct: 205 DSTGSHSGDEGDDPNSQRSKMSRRQRTNFTDEQIEKLEKVFEKTHYPDVFTREELAQQVN 264
Query: 88 LTEA 91
L+EA
Sbjct: 265 LSEA 268
>gi|426243075|ref|XP_004015389.1| PREDICTED: LOW QUALITY PROTEIN: cone-rod homeobox protein [Ovis
aries]
Length = 295
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 35/45 (77%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR+RT FT QL+ELEA FA+ +YPD+ REE+A+ NL E+
Sbjct: 37 RKQRRERTTFTRSQLEELEALFAKTQYPDVYAREEVALKINLPES 81
>gi|74095943|ref|NP_001027814.1| paired homeobox protein [Takifugu rubripes]
gi|27475514|gb|AAL58533.1| paired homeobox protein [Takifugu rubripes]
Length = 380
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 33/45 (73%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT+QQL+ LE TF + YPD+ RE +AM TNL EA
Sbjct: 64 RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEA 108
>gi|47213896|emb|CAF95838.1| unnamed protein product [Tetraodon nigroviridis]
Length = 390
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 33/45 (73%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT+QQL+ LE TF + YPD+ RE +AM TNL EA
Sbjct: 66 RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEA 110
>gi|301768198|ref|XP_002919511.1| PREDICTED: diencephalon/mesencephalon homeobox protein 1-like
isoform 2 [Ailuropoda melanoleuca]
Length = 382
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 33/45 (73%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT+QQL+ LE TF + YPD+ RE +AM TNL EA
Sbjct: 69 RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEA 113
>gi|281485128|gb|ADA70354.1| paired-like family homeodomain transcription factor [Junonia
coenia]
Length = 264
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FTS QL+ELE F+R YPD+ TREE+AM LTEA
Sbjct: 45 RKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAMKIGLTEA 89
>gi|156356366|ref|XP_001623896.1| predicted protein [Nematostella vectensis]
gi|156210636|gb|EDO31796.1| predicted protein [Nematostella vectensis]
Length = 93
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 46/71 (64%), Gaps = 2/71 (2%)
Query: 23 NHNDSIEDSSAKDSSSN--SKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTRE 80
N +D D A DS++ K++ ++QRR RT FTS QL+ELE FA+ YPD+ TRE
Sbjct: 3 NSDDEKSDEEAVDSNNELEGKDSTAKRKQRRYRTTFTSYQLEELERAFAKTHYPDVFTRE 62
Query: 81 EIAMWTNLTEA 91
+A+ +LTEA
Sbjct: 63 ALAVKIDLTEA 73
>gi|560583|gb|AAB30807.1| PAX7-FKHR=chimeric transcription factor(FKHR, PAX7) {translocation}
[human, alveolar rhabdomyosarcoma patient, Peptide, 420
aa]
Length = 420
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT++QL+ELE F R YPD+ TREE+A T LTEA
Sbjct: 188 RKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEA 232
>gi|345780841|ref|XP_853026.2| PREDICTED: diencephalon/mesencephalon homeobox protein 1 isoform 2
[Canis lupus familiaris]
Length = 373
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 33/45 (73%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT+QQL+ LE TF + YPD+ RE +AM TNL EA
Sbjct: 64 RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEA 108
>gi|355002431|gb|AER51840.1| cone-rod homeobox, partial [Nyctalus plancyi]
Length = 285
Score = 58.2 bits (139), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 34/44 (77%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTE 90
++QRR+RT FT QL+ELEA FA+ +YPD+ REE+A+ NL E
Sbjct: 29 RKQRRERTTFTRSQLEELEALFAKTQYPDVYAREEVALKINLPE 72
>gi|432950125|ref|XP_004084398.1| PREDICTED: paired box protein Pax-7-like [Oryzias latipes]
Length = 403
Score = 58.2 bits (139), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT++QL+ELE F R YPD+ TREE+A T LTEA
Sbjct: 219 RKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEA 263
>gi|281351948|gb|EFB27532.1| hypothetical protein PANDA_008151 [Ailuropoda melanoleuca]
Length = 383
Score = 58.2 bits (139), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 33/45 (73%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT+QQL+ LE TF + YPD+ RE +AM TNL EA
Sbjct: 70 RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEA 114
>gi|355002429|gb|AER51839.1| cone-rod homeobox, partial [Nyctalus plancyi]
gi|355002433|gb|AER51841.1| cone-rod homeobox, partial [Nyctalus plancyi]
gi|355002435|gb|AER51842.1| cone-rod homeobox, partial [Nyctalus plancyi]
Length = 285
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 34/44 (77%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTE 90
++QRR+RT FT QL+ELEA FA+ +YPD+ REE+A+ NL E
Sbjct: 29 RKQRRERTTFTRSQLEELEALFAKTQYPDVYAREEVALKINLPE 72
>gi|291045446|ref|NP_001166914.1| cone-rod homeobox protein [Felis catus]
gi|289583669|gb|ADD10739.1| truncated cone-rod homeobox protein [Felis catus]
Length = 185
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 35/45 (77%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR+RT FT QL+ELEA FA+ +YPD+ REE+A+ NL E+
Sbjct: 37 RKQRRERTTFTRSQLEELEALFAKTQYPDVYAREEVALKINLPES 81
>gi|242006780|ref|XP_002424223.1| Short stature homeobox protein, putative [Pediculus humanus
corporis]
gi|212507585|gb|EEB11485.1| Short stature homeobox protein, putative [Pediculus humanus
corporis]
Length = 152
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 50/97 (51%), Gaps = 4/97 (4%)
Query: 2 LERGRILPIEPLIGNIKTELSNHNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQL 61
L+ G + P L NI + + ++ + S N+ ++ +Q+R RT FT QL
Sbjct: 31 LDHGVVNPGHRLGPNI----CDQSSTLSQQHSGQQSGNTSDSDKPTKQKRHRTRFTPAQL 86
Query: 62 QELEATFARNRYPDMSTREEIAMWTNLTEALRETHAY 98
ELE F++ YPD+ REEIAM LTE+ + Y
Sbjct: 87 NELERCFSKTHYPDIFMREEIAMRIGLTESRVQVRNY 123
>gi|4557489|ref|NP_000545.1| cone-rod homeobox protein [Homo sapiens]
gi|426389410|ref|XP_004061116.1| PREDICTED: cone-rod homeobox protein [Gorilla gorilla gorilla]
gi|3287764|sp|O43186.1|CRX_HUMAN RecName: Full=Cone-rod homeobox protein
gi|2665534|gb|AAB88418.1| cone rod homeobox protein [Homo sapiens]
gi|16741738|gb|AAH16664.1| CRX protein [Homo sapiens]
gi|30583567|gb|AAP36028.1| cone-rod homeobox [Homo sapiens]
gi|31565779|gb|AAH53672.1| CRX protein [Homo sapiens]
gi|60654681|gb|AAX31905.1| cone-rod homeobox [synthetic construct]
gi|60654683|gb|AAX31906.1| cone-rod homeobox [synthetic construct]
gi|119577919|gb|EAW57515.1| cone-rod homeobox [Homo sapiens]
gi|123993777|gb|ABM84490.1| cone-rod homeobox [synthetic construct]
gi|123995127|gb|ABM85165.1| cone-rod homeobox [synthetic construct]
gi|261861636|dbj|BAI47340.1| cone-rod homeobox protein [synthetic construct]
gi|355755985|gb|EHH59732.1| hypothetical protein EGM_09919 [Macaca fascicularis]
Length = 299
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 35/45 (77%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR+RT FT QL+ELEA FA+ +YPD+ REE+A+ NL E+
Sbjct: 37 RKQRRERTTFTRSQLEELEALFAKTQYPDVYAREEVALKINLPES 81
>gi|11177896|ref|NP_068627.1| cone-rod homeobox protein [Rattus norvegicus]
gi|7384988|gb|AAF61630.1|AF135838_1 homeodomain protein CRX [Rattus norvegicus]
Length = 299
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 35/45 (77%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR+RT FT QL+ELEA FA+ +YPD+ REE+A+ NL E+
Sbjct: 37 RKQRRERTTFTRSQLEELEALFAKTQYPDVYAREEVALKINLPES 81
>gi|301768196|ref|XP_002919510.1| PREDICTED: diencephalon/mesencephalon homeobox protein 1-like
isoform 1 [Ailuropoda melanoleuca]
Length = 377
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 33/45 (73%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT+QQL+ LE TF + YPD+ RE +AM TNL EA
Sbjct: 64 RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEA 108
>gi|18252583|gb|AAL66343.1|AF461039_1 paired-type homeobox Atx [Mus musculus]
Length = 282
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 33/45 (73%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT+QQL+ LE TF + YPD+ RE +AM TNL EA
Sbjct: 69 RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEA 113
>gi|4587213|dbj|BAA76666.1| cone-rod homeobox protein [Rattus norvegicus]
gi|149056921|gb|EDM08352.1| cone-rod homeobox protein [Rattus norvegicus]
Length = 299
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 35/45 (77%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR+RT FT QL+ELEA FA+ +YPD+ REE+A+ NL E+
Sbjct: 37 RKQRRERTTFTRSQLEELEALFAKTQYPDVYAREEVALKINLPES 81
>gi|443683851|gb|ELT87953.1| hypothetical protein CAPTEDRAFT_174285 [Capitella teleta]
Length = 368
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 33/45 (73%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT+QQL LE TF++ YPD+ RE +AM TNL EA
Sbjct: 102 RKQRRSRTAFTNQQLAALEKTFSKTHYPDVVMRERLAMMTNLPEA 146
>gi|432093386|gb|ELK25472.1| Cone-rod homeobox protein [Myotis davidii]
Length = 299
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 35/45 (77%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR+RT FT QL+ELEA FA+ +YPD+ REE+A+ NL E+
Sbjct: 37 RKQRRERTTFTRSQLEELEALFAKTQYPDVYAREEVALKINLPES 81
>gi|403299132|ref|XP_003940344.1| PREDICTED: cone-rod homeobox protein [Saimiri boliviensis
boliviensis]
Length = 299
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 35/45 (77%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR+RT FT QL+ELEA FA+ +YPD+ REE+A+ NL E+
Sbjct: 37 RKQRRERTTFTRSQLEELEALFAKTQYPDVYAREEVALKINLPES 81
>gi|350418342|ref|XP_003491830.1| PREDICTED: paired mesoderm homeobox protein 2B-like [Bombus
impatiens]
Length = 200
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 33/45 (73%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FTS QL+ELE F YPD+ TREEIAM +LTEA
Sbjct: 136 RKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEA 180
>gi|6681029|ref|NP_031796.1| cone-rod homeobox protein isoform 1 [Mus musculus]
gi|3287765|sp|O54751.1|CRX_MOUSE RecName: Full=Cone-rod homeobox protein
gi|2665517|gb|AAB88585.1| homeodomain protein [Mus musculus]
gi|16741347|gb|AAH16502.1| Cone-rod homeobox containing gene [Mus musculus]
gi|26343523|dbj|BAC35418.1| unnamed protein product [Mus musculus]
gi|74137945|dbj|BAE24107.1| unnamed protein product [Mus musculus]
gi|148710176|gb|EDL42122.1| cone-rod homeobox containing gene [Mus musculus]
Length = 299
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 35/45 (77%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR+RT FT QL+ELEA FA+ +YPD+ REE+A+ NL E+
Sbjct: 37 RKQRRERTTFTRSQLEELEALFAKTQYPDVYAREEVALKINLPES 81
>gi|348504630|ref|XP_003439864.1| PREDICTED: diencephalon/mesencephalon homeobox protein 1-B-like
isoform 2 [Oreochromis niloticus]
Length = 400
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 33/45 (73%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT+QQL+ LE TF + YPD+ RE +AM TNL EA
Sbjct: 69 RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEA 113
>gi|292628755|ref|XP_002667096.1| PREDICTED: aristaless-related homeobox protein-like [Danio rerio]
Length = 385
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 48/82 (58%), Gaps = 3/82 (3%)
Query: 13 LIGNIKTELSNHNDSIEDSSAKDSSSNSKNTKNS---KRQRRQRTHFTSQQLQELEATFA 69
+ G L ++ +S + S S +T++ ++QRR RT FTS QL+ELE F
Sbjct: 123 ICGETNVTLKQEREAFLKNSEETSLSAGSDTEDGMLKRKQRRYRTTFTSYQLEELERAFQ 182
Query: 70 RNRYPDMSTREEIAMWTNLTEA 91
+ YPD+ TREE+AM +LTEA
Sbjct: 183 KTHYPDVFTREELAMRLDLTEA 204
>gi|47194703|emb|CAF87132.1| unnamed protein product [Tetraodon nigroviridis]
Length = 244
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 33/45 (73%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT+QQL+ LE TF + YPD+ RE +AM TNL EA
Sbjct: 69 RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEA 113
>gi|348504628|ref|XP_003439863.1| PREDICTED: diencephalon/mesencephalon homeobox protein 1-B-like
isoform 1 [Oreochromis niloticus]
Length = 395
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 33/45 (73%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT+QQL+ LE TF + YPD+ RE +AM TNL EA
Sbjct: 64 RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEA 108
>gi|312381183|gb|EFR26989.1| hypothetical protein AND_06563 [Anopheles darlingi]
Length = 291
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT +QL+ LE F R +YPD+ TREE+A TNLTEA
Sbjct: 44 RKQRRSRTTFTGEQLEALEKAFQRTQYPDVYTREELASSTNLTEA 88
>gi|432892481|ref|XP_004075802.1| PREDICTED: paired mesoderm homeobox protein 2A-like [Oryzias
latipes]
Length = 299
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 41/71 (57%)
Query: 21 LSNHNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTRE 80
L H + S K SS ++QRR RT FTS QL+ELE FA YPD+ TRE
Sbjct: 64 LREHQPTPYSSGEKRLSSXXSGLNEKRKQRRIRTTFTSSQLKELERVFAETHYPDIYTRE 123
Query: 81 EIAMWTNLTEA 91
E+A+ +LTEA
Sbjct: 124 ELALKIDLTEA 134
>gi|380018965|ref|XP_003693389.1| PREDICTED: paired mesoderm homeobox protein 2B-like [Apis florea]
Length = 187
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 34/54 (62%)
Query: 38 SNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
S ++QRR RT FTS QL+ELE F YPD+ TREEIAM +LTEA
Sbjct: 127 SGHDGLAEKRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEA 180
>gi|402906113|ref|XP_003915850.1| PREDICTED: cone-rod homeobox protein [Papio anubis]
Length = 378
Score = 58.2 bits (139), Expect = 6e-07, Method: Composition-based stats.
Identities = 25/45 (55%), Positives = 35/45 (77%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR+RT FT QL+ELEA FA+ +YPD+ REE+A+ NL E+
Sbjct: 116 RKQRRERTTFTRSQLEELEALFAKTQYPDVYAREEVALKINLPES 160
>gi|736381|gb|AAA64491.1| Pax7 [Mus musculus]
Length = 290
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT++QL+ELE F R YPD+ TREE+A T LTEA
Sbjct: 179 RKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEA 223
>gi|395528443|ref|XP_003766339.1| PREDICTED: paired box protein Pax-7 [Sarcophilus harrisii]
Length = 637
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT++QL+ELE F R YPD+ TREE+A T LTEA
Sbjct: 347 RKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEA 391
>gi|327270987|ref|XP_003220269.1| PREDICTED: diencephalon/mesencephalon homeobox protein 1-B-like
isoform 1 [Anolis carolinensis]
Length = 367
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 33/45 (73%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT+QQL+ LE TF + YPD+ RE +AM TNL EA
Sbjct: 69 RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEA 113
>gi|195472307|ref|XP_002088442.1| GE12435 [Drosophila yakuba]
gi|194174543|gb|EDW88154.1| GE12435 [Drosophila yakuba]
Length = 612
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 53/114 (46%), Gaps = 31/114 (27%)
Query: 2 LERGRILPIEPLIGNIKTELSNHNDSIEDSSAKDSSSNSKNTKNS--------------- 46
L RGR P++ T+LS+ + S K SSS +
Sbjct: 149 LVRGRDAPLD-------TDLSSASGSPAGDGTKASSSCGSDVSGGHHNNGKPSDEDISDC 201
Query: 47 ---------KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT F++ QL ELE F R +YPD+ TREE+A TNLTEA
Sbjct: 202 ESEPGIALKRKQRRCRTTFSASQLDELERAFERTQYPDIYTREELAQRTNLTEA 255
>gi|73982544|ref|XP_850737.1| PREDICTED: ALX homeobox 4 isoform 1 [Canis lupus familiaris]
Length = 414
Score = 58.2 bits (139), Expect = 6e-07, Method: Composition-based stats.
Identities = 29/66 (43%), Positives = 42/66 (63%), Gaps = 3/66 (4%)
Query: 29 EDSSAKDSSS---NSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMW 85
+D ++ D S + + N ++RR RT FTS QL+ELE F + YPD+ RE++AM
Sbjct: 194 QDRASADLPSPLEKADSESNKGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMR 253
Query: 86 TNLTEA 91
T+LTEA
Sbjct: 254 TDLTEA 259
>gi|327270989|ref|XP_003220270.1| PREDICTED: diencephalon/mesencephalon homeobox protein 1-B-like
isoform 2 [Anolis carolinensis]
Length = 362
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 33/45 (73%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT+QQL+ LE TF + YPD+ RE +AM TNL EA
Sbjct: 64 RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEA 108
>gi|332027511|gb|EGI67588.1| Paired mesoderm homeobox protein 2B [Acromyrmex echinatior]
Length = 212
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 33/45 (73%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FTS QL+ELE F YPD+ TREEIAM +LTEA
Sbjct: 138 RKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEA 182
>gi|18252581|gb|AAL66342.1|AF461038_1 paired-type homeobox Atx [Gallus gallus]
Length = 303
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 33/45 (73%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT+QQL+ LE TF + YPD+ RE +AM TNL EA
Sbjct: 65 RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEA 109
>gi|258504795|gb|ACV73003.1| ALR-1 [Caenorhabditis remanei]
gi|258504797|gb|ACV73004.1| ALR-1 [Caenorhabditis remanei]
gi|258504799|gb|ACV73005.1| ALR-1 [Caenorhabditis remanei]
gi|258504801|gb|ACV73006.1| ALR-1 [Caenorhabditis remanei]
gi|258504803|gb|ACV73007.1| ALR-1 [Caenorhabditis remanei]
gi|258504805|gb|ACV73008.1| ALR-1 [Caenorhabditis remanei]
gi|258504807|gb|ACV73009.1| ALR-1 [Caenorhabditis remanei]
gi|258504809|gb|ACV73010.1| ALR-1 [Caenorhabditis remanei]
gi|258504813|gb|ACV73012.1| ALR-1 [Caenorhabditis remanei]
gi|258504815|gb|ACV73013.1| ALR-1 [Caenorhabditis remanei]
gi|258504817|gb|ACV73014.1| ALR-1 [Caenorhabditis remanei]
gi|258504819|gb|ACV73015.1| ALR-1 [Caenorhabditis remanei]
gi|258504821|gb|ACV73016.1| ALR-1 [Caenorhabditis remanei]
gi|258504823|gb|ACV73017.1| ALR-1 [Caenorhabditis remanei]
gi|258504825|gb|ACV73018.1| ALR-1 [Caenorhabditis remanei]
Length = 316
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 26 DSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMW 85
D E+ S D + NS + ++QRR RT F++ QL ELE F R YPD+ TREE+A
Sbjct: 86 DCRENGSPSDGT-NSPDDNGKRKQRRYRTTFSAFQLDELEKVFGRTHYPDVFTREELATR 144
Query: 86 TNLTEA 91
LTEA
Sbjct: 145 VQLTEA 150
>gi|296208775|ref|XP_002751237.1| PREDICTED: homeobox protein aristaless-like 3 [Callithrix jacchus]
Length = 343
Score = 58.2 bits (139), Expect = 6e-07, Method: Composition-based stats.
Identities = 31/81 (38%), Positives = 48/81 (59%), Gaps = 13/81 (16%)
Query: 12 PLIGNIKTELS-NHNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFAR 70
P + +++ LS H DS+E + KN ++RR RT F++ QL+ELE F +
Sbjct: 127 PCLASLRLPLSPGHPDSMELA------------KNKSKKRRNRTTFSTFQLEELEKVFQK 174
Query: 71 NRYPDMSTREEIAMWTNLTEA 91
YPD+ RE++A+ T+LTEA
Sbjct: 175 THYPDVYAREQLALRTDLTEA 195
>gi|195430056|ref|XP_002063073.1| GK21727 [Drosophila willistoni]
gi|194159158|gb|EDW74059.1| GK21727 [Drosophila willistoni]
Length = 472
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 35/45 (77%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT++QL+ LE FAR +YPD+ TREE+A T LTEA
Sbjct: 180 RKQRRSRTTFTAEQLEALERAFARTQYPDVYTREELAQTTALTEA 224
>gi|147904024|ref|NP_001084383.1| paired-like homeobox 2b [Xenopus laevis]
gi|38425329|gb|AAR19766.1| homeodomain protein [Xenopus laevis]
Length = 293
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FTS QL+ELE FA YPD+ TREE+A+ +LTEA
Sbjct: 96 RKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEA 140
>gi|47215984|emb|CAF96386.1| unnamed protein product [Tetraodon nigroviridis]
Length = 353
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 33/45 (73%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT+QQL+ LE TF + YPD+ RE +AM TNL EA
Sbjct: 65 RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEA 109
>gi|326932470|ref|XP_003212340.1| PREDICTED: paired box protein Pax-7, partial [Meleagris
gallopavo]
Length = 330
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT++QL+ELE F R YPD+ TREE+A T LTEA
Sbjct: 19 RKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEA 63
>gi|258504811|gb|ACV73011.1| ALR-1 [Caenorhabditis remanei]
Length = 316
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 26 DSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMW 85
D E+ S D + NS + ++QRR RT F++ QL ELE F R YPD+ TREE+A
Sbjct: 86 DCRENGSPSDGT-NSPDDNGKRKQRRYRTTFSAFQLDELEKVFGRTHYPDVFTREELATR 144
Query: 86 TNLTEA 91
LTEA
Sbjct: 145 VQLTEA 150
>gi|172355888|ref|NP_001116492.1| paired-like homeobox 2b [Xenopus (Silurana) tropicalis]
gi|171846498|gb|AAI61760.1| phox2b protein [Xenopus (Silurana) tropicalis]
Length = 293
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FTS QL+ELE FA YPD+ TREE+A+ +LTEA
Sbjct: 96 RKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEA 140
>gi|270010993|gb|EFA07441.1| homeobrain [Tribolium castaneum]
Length = 261
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 46/76 (60%)
Query: 16 NIKTELSNHNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPD 75
+I+ E + DS+ DS + S N ++ RR RT FT+ QL +LE F + +YPD
Sbjct: 31 SIEGESDSKVDSVSDSEMVEESIEDLNDTRPRKIRRSRTTFTTYQLHQLERAFEKTQYPD 90
Query: 76 MSTREEIAMWTNLTEA 91
+ TREE+AM +L+EA
Sbjct: 91 VFTREELAMRLDLSEA 106
>gi|47203313|emb|CAF94225.1| unnamed protein product [Tetraodon nigroviridis]
Length = 69
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT++QL+ELE F R YPD+ TREE+A T LTEA
Sbjct: 20 RKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEA 64
>gi|397473637|ref|XP_003808312.1| PREDICTED: homeobox protein aristaless-like 4 [Pan paniscus]
Length = 424
Score = 58.2 bits (139), Expect = 7e-07, Method: Composition-based stats.
Identities = 29/66 (43%), Positives = 42/66 (63%), Gaps = 3/66 (4%)
Query: 29 EDSSAKDSSS---NSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMW 85
+D ++ D S + + N ++RR RT FTS QL+ELE F + YPD+ RE++AM
Sbjct: 204 QDRASSDLPSPLEKADSESNKGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMR 263
Query: 86 TNLTEA 91
T+LTEA
Sbjct: 264 TDLTEA 269
>gi|147905324|ref|NP_001088286.1| paired-like homeobox 2b [Xenopus laevis]
gi|54038154|gb|AAH84305.1| LOC495120 protein [Xenopus laevis]
Length = 293
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FTS QL+ELE FA YPD+ TREE+A+ +LTEA
Sbjct: 96 RKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEA 140
>gi|259053117|emb|CAX11345.1| pairberry [Parasteatoda tepidariorum]
Length = 296
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 36/45 (80%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT F+++Q++ELE F R +YPD+ TREE+A+ T LTEA
Sbjct: 159 RKQRRSRTTFSAEQVEELERAFERTQYPDIYTREELALRTGLTEA 203
>gi|337216969|gb|AEI60176.1| Pax7-forkhead fusion protein [Homo sapiens]
Length = 405
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT++QL+ELE F R YPD+ TREE+A T LTEA
Sbjct: 14 RKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEA 58
>gi|390470456|ref|XP_003734292.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein aristaless-like 4
[Callithrix jacchus]
Length = 415
Score = 57.8 bits (138), Expect = 7e-07, Method: Composition-based stats.
Identities = 29/66 (43%), Positives = 42/66 (63%), Gaps = 3/66 (4%)
Query: 29 EDSSAKDSSS---NSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMW 85
+D ++ D S + + N ++RR RT FTS QL+ELE F + YPD+ RE++AM
Sbjct: 195 QDRASSDLPSPLEKADSESNKGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMR 254
Query: 86 TNLTEA 91
T+LTEA
Sbjct: 255 TDLTEA 260
>gi|126331693|ref|XP_001365345.1| PREDICTED: paired mesoderm homeobox protein 2B-like [Monodelphis
domestica]
Length = 314
Score = 57.8 bits (138), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FTS QL+ELE FA YPD+ TREE+A+ +LTEA
Sbjct: 96 RKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEA 140
>gi|444706976|gb|ELW48288.1| Homeobox protein ARX [Tupaia chinensis]
Length = 147
Score = 57.8 bits (138), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 38/55 (69%)
Query: 37 SSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
S+S+ ++QRR RT FTS QL+ELE F + YPD+ TREE+AM +LTEA
Sbjct: 66 GSDSEEGLLKRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRLDLTEA 120
>gi|17737409|ref|NP_523556.1| paired, isoform A [Drosophila melanogaster]
gi|7297914|gb|AAF53160.1| paired, isoform A [Drosophila melanogaster]
gi|16076848|gb|AAL13353.1| GH22686p [Drosophila melanogaster]
gi|220945620|gb|ACL85353.1| prd-PA [synthetic construct]
gi|220952756|gb|ACL88921.1| prd-PA [synthetic construct]
Length = 590
Score = 57.8 bits (138), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT F++ QL ELE F R +YPD+ TREE+A TNLTEA
Sbjct: 188 RKQRRCRTTFSASQLDELERAFERTQYPDIYTREELAQRTNLTEA 232
>gi|296479667|tpg|DAA21782.1| TPA: homeobox protein aristaless-like 4 [Bos taurus]
Length = 246
Score = 57.8 bits (138), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 34/47 (72%)
Query: 45 NSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
N ++RR RT FTS QL+ELE F + YPD+ RE++AM T+LTEA
Sbjct: 196 NKGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEA 242
>gi|194209207|ref|XP_001917289.1| PREDICTED: LOW QUALITY PROTEIN: paired mesoderm homeobox protein
2B-like [Equus caballus]
Length = 315
Score = 57.8 bits (138), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FTS QL+ELE FA YPD+ TREE+A+ +LTEA
Sbjct: 96 RKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEA 140
>gi|195350993|ref|XP_002042021.1| GM26340 [Drosophila sechellia]
gi|194123845|gb|EDW45888.1| GM26340 [Drosophila sechellia]
Length = 613
Score = 57.8 bits (138), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT F++ QL ELE F R +YPD+ TREE+A TNLTEA
Sbjct: 211 RKQRRCRTTFSASQLDELERAFERTQYPDIYTREELAQRTNLTEA 255
>gi|383854434|ref|XP_003702726.1| PREDICTED: uncharacterized protein LOC100883470 [Megachile
rotundata]
Length = 313
Score = 57.8 bits (138), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 33/45 (73%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FTS QL+ELE F YPD+ TREEIAM +LTEA
Sbjct: 136 RKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEA 180
>gi|297277474|ref|XP_001113415.2| PREDICTED: cone-rod homeobox protein [Macaca mulatta]
Length = 356
Score = 57.8 bits (138), Expect = 7e-07, Method: Composition-based stats.
Identities = 25/45 (55%), Positives = 35/45 (77%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR+RT FT QL+ELEA FA+ +YPD+ REE+A+ NL E+
Sbjct: 94 RKQRRERTTFTRSQLEELEALFAKTQYPDVYAREEVALKINLPES 138
>gi|157129916|ref|XP_001661815.1| paired box protein, putative [Aedes aegypti]
gi|108872028|gb|EAT36253.1| AAEL011647-PA [Aedes aegypti]
Length = 283
Score = 57.8 bits (138), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 33/45 (73%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FTS QL+ELE F YPD+ TREEIAM +LTEA
Sbjct: 22 RKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEA 66
>gi|431920822|gb|ELK18595.1| Cone-rod homeobox protein [Pteropus alecto]
Length = 371
Score = 57.8 bits (138), Expect = 7e-07, Method: Composition-based stats.
Identities = 25/45 (55%), Positives = 35/45 (77%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR+RT FT QL+ELEA FA+ +YPD+ REE+A+ NL E+
Sbjct: 109 RKQRRERTTFTRSQLEELEALFAKTQYPDVYAREEVALKINLPES 153
>gi|402869237|ref|XP_003898672.1| PREDICTED: paired mesoderm homeobox protein 2B [Papio anubis]
Length = 314
Score = 57.8 bits (138), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FTS QL+ELE FA YPD+ TREE+A+ +LTEA
Sbjct: 96 RKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEA 140
>gi|395530279|ref|XP_003767224.1| PREDICTED: diencephalon/mesencephalon homeobox protein 1
[Sarcophilus harrisii]
Length = 316
Score = 57.8 bits (138), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 33/45 (73%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT+QQL+ LE TF + YPD+ RE +AM TNL EA
Sbjct: 64 RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEA 108
>gi|270210217|gb|ACX30667.2| aristaless 2 [Junonia coenia]
Length = 212
Score = 57.8 bits (138), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 32/45 (71%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FTS QL ELE F R YPD+ TREE+A+ LTEA
Sbjct: 10 RKQRRYRTTFTSYQLDELEKAFGRTHYPDVFTREELALKIGLTEA 54
>gi|395542879|ref|XP_003773352.1| PREDICTED: paired mesoderm homeobox protein 2B [Sarcophilus
harrisii]
Length = 265
Score = 57.8 bits (138), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FTS QL+ELE FA YPD+ TREE+A+ +LTEA
Sbjct: 96 RKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEA 140
>gi|355002459|gb|AER51854.1| cone-rod homeobox, partial [Sphaerias blanfordi]
Length = 260
Score = 57.8 bits (138), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 35/45 (77%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR+RT FT QL+ELEA FA+ +YPD+ REE+A+ NL E+
Sbjct: 4 RKQRRERTTFTRSQLEELEALFAKTQYPDVYAREEVALKINLPES 48
>gi|308494817|ref|XP_003109597.1| CRE-ALR-1 protein [Caenorhabditis remanei]
gi|308245787|gb|EFO89739.1| CRE-ALR-1 protein [Caenorhabditis remanei]
Length = 362
Score = 57.8 bits (138), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 26 DSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMW 85
D E+ S D + NS + ++QRR RT F++ QL ELE F R YPD+ TREE+A
Sbjct: 95 DCRENGSPSDGT-NSPDDNGKRKQRRYRTTFSAFQLDELEKVFGRTHYPDVFTREELATR 153
Query: 86 TNLTEA 91
LTEA
Sbjct: 154 VQLTEA 159
>gi|194861365|ref|XP_001969768.1| GG10275 [Drosophila erecta]
gi|190661635|gb|EDV58827.1| GG10275 [Drosophila erecta]
Length = 614
Score = 57.8 bits (138), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT F++ QL ELE F R +YPD+ TREE+A TNLTEA
Sbjct: 211 RKQRRCRTTFSASQLDELERAFERTQYPDIYTREELAQRTNLTEA 255
>gi|410927106|ref|XP_003977007.1| PREDICTED: paired box protein Pax-7-like, partial [Takifugu
rubripes]
Length = 66
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT++QL+ELE F R YPD+ TREE+A T LTEA
Sbjct: 19 RKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEA 63
>gi|348558708|ref|XP_003465158.1| PREDICTED: homeobox protein aristaless-like 4-like [Cavia
porcellus]
Length = 407
Score = 57.8 bits (138), Expect = 8e-07, Method: Composition-based stats.
Identities = 29/66 (43%), Positives = 42/66 (63%), Gaps = 3/66 (4%)
Query: 29 EDSSAKDSSS---NSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMW 85
+D ++ D S + + N ++RR RT FTS QL+ELE F + YPD+ RE++AM
Sbjct: 187 QDRASADLPSPLEKADSESNKGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMR 246
Query: 86 TNLTEA 91
T+LTEA
Sbjct: 247 TDLTEA 252
>gi|322797345|gb|EFZ19457.1| hypothetical protein SINV_02900 [Solenopsis invicta]
Length = 185
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 33/45 (73%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FTS QL+ELE F YPD+ TREEIAM +LTEA
Sbjct: 138 RKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEA 182
>gi|297705321|ref|XP_002829527.1| PREDICTED: cone-rod homeobox protein-like, partial [Pongo abelii]
Length = 86
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 35/45 (77%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR+RT FT QL+ELEA FA+ +YPD+ REE+A+ NL E+
Sbjct: 37 RKQRRERTTFTRSQLEELEALFAKTQYPDVYAREEVALKINLPES 81
>gi|6469356|emb|CAA89259.1| Phox2 [Gallus gallus]
Length = 115
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 45/89 (50%), Gaps = 2/89 (2%)
Query: 5 GRILPIEPL--IGNIKTELSNHNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQ 62
G P PL L +H S + S+ ++QRR RT F+S QL+
Sbjct: 25 GATPPCPPLSSANCALGALRDHQPSPYSAVPYKFFSDPSAINEKRKQRRIRTTFSSAQLK 84
Query: 63 ELEATFARNRYPDMSTREEIAMWTNLTEA 91
ELE FA YPD+ TREE+A+ +LTEA
Sbjct: 85 ELERVFAETHYPDIYTREELALKIDLTEA 113
>gi|24583824|ref|NP_723721.1| paired, isoform B [Drosophila melanogaster]
gi|123412|sp|P06601.1|PRD_DROME RecName: Full=Segmentation protein paired
gi|158160|gb|AAB59221.1| segmentation protein [Drosophila melanogaster]
gi|22946299|gb|AAN10801.1| paired, isoform B [Drosophila melanogaster]
Length = 613
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT F++ QL ELE F R +YPD+ TREE+A TNLTEA
Sbjct: 211 RKQRRCRTTFSASQLDELERAFERTQYPDIYTREELAQRTNLTEA 255
>gi|195386642|ref|XP_002052013.1| GJ23973 [Drosophila virilis]
gi|194148470|gb|EDW64168.1| GJ23973 [Drosophila virilis]
Length = 619
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 35/45 (77%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT F++ QL+ELE F R +YPD+ TREE+A TNLTEA
Sbjct: 208 RKQRRCRTTFSAAQLEELERAFERTQYPDIFTREELAQRTNLTEA 252
>gi|195578673|ref|XP_002079188.1| GD22133 [Drosophila simulans]
gi|194191197|gb|EDX04773.1| GD22133 [Drosophila simulans]
Length = 613
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT F++ QL ELE F R +YPD+ TREE+A TNLTEA
Sbjct: 211 RKQRRCRTTFSASQLDELERAFERTQYPDIYTREELAQRTNLTEA 255
>gi|171543907|ref|NP_001116404.1| diencephalon/mesencephalon homeobox 1 isoform Mbx-L [Oryzias
latipes]
gi|157410512|gb|ABV53979.1| diencephalon/mesencephalon homeobox 1 isoform Mbx-L [Oryzias
latipes]
Length = 434
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 33/45 (73%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT+QQL+ LE TF + YPD+ RE +AM TNL EA
Sbjct: 105 RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEA 149
>gi|45383171|ref|NP_989830.1| transcription factor Crx [Gallus gallus]
gi|33339721|gb|AAQ14340.1|AF285171_1 transcription factor Crx [Gallus gallus]
Length = 327
Score = 57.8 bits (138), Expect = 8e-07, Method: Composition-based stats.
Identities = 25/45 (55%), Positives = 33/45 (73%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR+RT FT QL LEA FA+ RYPD+ REE+A+ NL E+
Sbjct: 36 RKQRRERTTFTRAQLDILEALFAKTRYPDIFMREEVALKINLPES 80
>gi|195035409|ref|XP_001989170.1| GH10195 [Drosophila grimshawi]
gi|193905170|gb|EDW04037.1| GH10195 [Drosophila grimshawi]
Length = 636
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 35/45 (77%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT F++ QL+ELE F R +YPD+ TREE+A TNLTEA
Sbjct: 202 RKQRRCRTTFSASQLEELERAFERTQYPDIFTREELAQRTNLTEA 246
>gi|390465901|ref|XP_003733484.1| PREDICTED: LOW QUALITY PROTEIN: diencephalon/mesencephalon homeobox
protein 1 [Callithrix jacchus]
Length = 508
Score = 57.8 bits (138), Expect = 8e-07, Method: Composition-based stats.
Identities = 26/45 (57%), Positives = 33/45 (73%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT+QQL+ LE TF + YPD+ RE +AM TNL EA
Sbjct: 194 RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEA 238
>gi|307211957|gb|EFN87869.1| Dorsal root ganglia homeobox protein [Harpegnathos saltator]
Length = 356
Score = 57.8 bits (138), Expect = 8e-07, Method: Composition-based stats.
Identities = 28/45 (62%), Positives = 36/45 (80%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT QQL+ELE+ FA+ YPD+ TRE++AM NLTEA
Sbjct: 21 RKQRRNRTTFTLQQLEELESAFAQTHYPDVFTREDLAMKINLTEA 65
>gi|410914461|ref|XP_003970706.1| PREDICTED: paired mesoderm homeobox protein 2B-like [Takifugu
rubripes]
Length = 285
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FTS QL+ELE FA YPD+ TREE+A+ +LTEA
Sbjct: 96 RKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEA 140
>gi|295656520|gb|ADG26723.1| ARX homeobox protein [Platynereis dumerilii]
Length = 283
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FTS QL+ELE F + YPD+ TREE+AM NLTEA
Sbjct: 197 RKQRRYRTTFTSFQLEELERAFQKTHYPDVFTREELAMRINLTEA 241
>gi|281344761|gb|EFB20345.1| hypothetical protein PANDA_019137 [Ailuropoda melanoleuca]
Length = 422
Score = 57.8 bits (138), Expect = 8e-07, Method: Composition-based stats.
Identities = 29/66 (43%), Positives = 42/66 (63%), Gaps = 3/66 (4%)
Query: 29 EDSSAKDSSS---NSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMW 85
+D ++ D S + + N ++RR RT FTS QL+ELE F + YPD+ RE++AM
Sbjct: 202 QDRASADLPSPLEKADSESNKGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMR 261
Query: 86 TNLTEA 91
T+LTEA
Sbjct: 262 TDLTEA 267
>gi|270009304|gb|EFA05752.1| paired [Tribolium castaneum]
Length = 447
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 33/45 (73%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT+ QL ELE F R +YPD+ TREE+A T LTEA
Sbjct: 174 RKQRRSRTTFTAHQLDELEKAFERTQYPDIYTREELAQRTKLTEA 218
>gi|291398309|ref|XP_002715836.1| PREDICTED: aristaless-like homeobox 3 [Oryctolagus cuniculus]
Length = 343
Score = 57.8 bits (138), Expect = 8e-07, Method: Composition-based stats.
Identities = 24/48 (50%), Positives = 35/48 (72%)
Query: 44 KNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
KN ++RR RT F++ QL+ELE F + YPD+ RE++A+ T+LTEA
Sbjct: 148 KNKSKKRRNRTTFSTFQLEELEKVFQKTHYPDVYAREQLALRTDLTEA 195
>gi|395734890|ref|XP_002814749.2| PREDICTED: uncharacterized protein LOC100444086 [Pongo abelii]
Length = 276
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FTS QL+ELE FA YPD+ TREE+A+ +LTEA
Sbjct: 96 RKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEA 140
>gi|241849437|ref|XP_002415688.1| homeobox domain, putative [Ixodes scapularis]
gi|215509902|gb|EEC19355.1| homeobox domain, putative [Ixodes scapularis]
Length = 268
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 36/55 (65%)
Query: 37 SSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
SS+ + +Q+R RT FT QLQELE +F++ YPD+ REE+AM LTE+
Sbjct: 88 SSHGGDADKPAKQKRHRTRFTPAQLQELERSFSKTHYPDIFMREELAMRIGLTES 142
>gi|195442996|ref|XP_002069225.1| GK21081 [Drosophila willistoni]
gi|194165310|gb|EDW80211.1| GK21081 [Drosophila willistoni]
Length = 614
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT F++ QL ELE F R +YPD+ TREE+A TNLTEA
Sbjct: 208 RKQRRCRTTFSAAQLDELERAFERTQYPDIYTREELAQRTNLTEA 252
>gi|4633284|gb|AAD26698.1|AF117979_1 homeodomain transcription factor NBPHOX [Homo sapiens]
gi|1841338|dbj|BAA11555.1| NBPhox [Homo sapiens]
gi|5672611|dbj|BAA82670.1| NBPhox [Homo sapiens]
Length = 314
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FTS QL+ELE FA YPD+ TREE+A+ +LTEA
Sbjct: 96 RKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEA 140
>gi|293341707|ref|XP_001077800.2| PREDICTED: uncharacterized protein LOC364152 [Rattus norvegicus]
Length = 270
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FTS QL+ELE FA YPD+ TREE+A+ +LTEA
Sbjct: 96 RKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEA 140
>gi|432856452|ref|XP_004068428.1| PREDICTED: retinal homeobox protein Rx1-like [Oryzias latipes]
Length = 344
Score = 57.8 bits (138), Expect = 8e-07, Method: Composition-based stats.
Identities = 32/71 (45%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 20 ELSNHNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTR 79
EL+ SI+ K S ++SK+ K+ RR RT FT+ QL ELE F ++ YPD+ +R
Sbjct: 115 ELAELRQSIQMDEGK-SPASSKDDPPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSR 173
Query: 80 EEIAMWTNLTE 90
EE+AM NL E
Sbjct: 174 EELAMKVNLPE 184
>gi|395521290|ref|XP_003764751.1| PREDICTED: paired mesoderm homeobox protein 2A [Sarcophilus
harrisii]
Length = 294
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 36/54 (66%)
Query: 38 SNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
S+ ++QRR RT FTS QL+ELE FA YPD+ TREE+A+ +LTEA
Sbjct: 82 SDPSGLSEKRKQRRIRTTFTSSQLKELERVFAETHYPDIYTREELALKIDLTEA 135
>gi|270005124|gb|EFA01572.1| hypothetical protein TcasGA2_TC007133 [Tribolium castaneum]
Length = 169
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 33/45 (73%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FTS QL+ELE F YPD+ TREEIAM +LTEA
Sbjct: 38 RKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEA 82
>gi|242015336|ref|XP_002428315.1| protein gooseberry, putative [Pediculus humanus corporis]
gi|212512911|gb|EEB15577.1| protein gooseberry, putative [Pediculus humanus corporis]
Length = 390
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT +QL+ELE F R +YPD+ TREE+A T LTEA
Sbjct: 184 RKQRRSRTTFTGEQLEELERAFQRTQYPDVYTREELAQKTKLTEA 228
>gi|327273654|ref|XP_003221595.1| PREDICTED: paired mesoderm homeobox protein 2B-like [Anolis
carolinensis]
Length = 95
Score = 57.8 bits (138), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 35/48 (72%), Gaps = 1/48 (2%)
Query: 45 NSKR-QRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
N KR QRR RT FTS QL+ELE FA YPD+ TREE+A+ +LTEA
Sbjct: 21 NEKRKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEA 68
>gi|6679401|ref|NP_032914.1| paired mesoderm homeobox protein 2B [Mus musculus]
gi|12707580|ref|NP_003915.2| paired mesoderm homeobox protein 2B [Homo sapiens]
gi|109074098|ref|XP_001098028.1| PREDICTED: paired mesoderm homeobox protein 2B [Macaca mulatta]
gi|114593819|ref|XP_001149518.1| PREDICTED: paired mesoderm homeobox protein 2B [Pan troglodytes]
gi|332219062|ref|XP_003258677.1| PREDICTED: paired mesoderm homeobox protein 2B [Nomascus
leucogenys]
gi|426344195|ref|XP_004038660.1| PREDICTED: paired mesoderm homeobox protein 2B [Gorilla gorilla
gorilla]
gi|6093753|sp|O35690.1|PHX2B_MOUSE RecName: Full=Paired mesoderm homeobox protein 2B; AltName:
Full=Neuroblastoma Phox; Short=NBPhox; AltName:
Full=PHOX2B homeodomain protein; AltName:
Full=Paired-like homeobox 2B
gi|116242712|sp|Q99453.2|PHX2B_HUMAN RecName: Full=Paired mesoderm homeobox protein 2B; AltName:
Full=Neuroblastoma Phox; Short=NBPhox; AltName:
Full=PHOX2B homeodomain protein; AltName:
Full=Paired-like homeobox 2B
gi|2632151|emb|CAA74833.1| PHOX2b protein [Mus musculus]
gi|5672613|dbj|BAA82671.1| NBPhox [Mus musculus]
gi|16877955|gb|AAH17199.1| Paired-like homeobox 2b [Homo sapiens]
gi|50927508|gb|AAH79610.1| Paired-like homeobox 2b [Mus musculus]
gi|119613395|gb|EAW92989.1| paired-like homeobox 2b [Homo sapiens]
gi|148705829|gb|EDL37776.1| paired-like homeobox 2b [Mus musculus]
Length = 314
Score = 57.8 bits (138), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FTS QL+ELE FA YPD+ TREE+A+ +LTEA
Sbjct: 96 RKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEA 140
>gi|392353126|ref|XP_344240.4| PREDICTED: paired mesoderm homeobox protein 2B [Rattus norvegicus]
Length = 301
Score = 57.8 bits (138), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FTS QL+ELE FA YPD+ TREE+A+ +LTEA
Sbjct: 96 RKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEA 140
>gi|164519071|ref|NP_001106801.1| cone-rod homeobox protein isoform 2 [Mus musculus]
Length = 323
Score = 57.8 bits (138), Expect = 9e-07, Method: Composition-based stats.
Identities = 25/45 (55%), Positives = 35/45 (77%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR+RT FT QL+ELEA FA+ +YPD+ REE+A+ NL E+
Sbjct: 61 RKQRRERTTFTRSQLEELEALFAKTQYPDVYAREEVALKINLPES 105
>gi|357611334|gb|EHJ67427.1| hypothetical protein KGM_16069 [Danaus plexippus]
Length = 432
Score = 57.8 bits (138), Expect = 9e-07, Method: Composition-based stats.
Identities = 27/45 (60%), Positives = 35/45 (77%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT QQL+ELE FA+ YPD+ TRE++A+ NLTEA
Sbjct: 152 RKQRRNRTTFTLQQLEELETAFAQTHYPDVFTREDLALKINLTEA 196
>gi|190608780|gb|ACE79721.1| paired-box transcription factor 3/7 [Branchiostoma lanceolatum]
Length = 297
Score = 57.8 bits (138), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 32/45 (71%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT +QL ELE F R YPD+ TREE+A T LTEA
Sbjct: 94 RKQRRSRTTFTPEQLDELEKAFERTHYPDIYTREELAQRTKLTEA 138
>gi|355002395|gb|AER51822.1| cone-rod homeobox, partial [Rhinolophus pearsonii]
Length = 278
Score = 57.8 bits (138), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 35/45 (77%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR+RT FT QL+ELEA FA+ +YPD+ REE+A+ NL E+
Sbjct: 29 RKQRRERTTFTRSQLEELEALFAKTQYPDVYAREEVALKINLRES 73
>gi|328706201|ref|XP_003243021.1| PREDICTED: hypothetical protein LOC100571445 [Acyrthosiphon pisum]
Length = 636
Score = 57.8 bits (138), Expect = 9e-07, Method: Composition-based stats.
Identities = 29/52 (55%), Positives = 33/52 (63%)
Query: 40 SKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
S N ++QRR RT FTS QL ELE F R YPD+ TREE+A LTEA
Sbjct: 225 SAGGTNKRKQRRYRTTFTSYQLDELEKAFGRTHYPDVFTREELASKIGLTEA 276
>gi|281485130|gb|ADA70355.1| paired-like family homeodomain transcription factor [Heliconius
erato]
Length = 259
Score = 57.8 bits (138), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 32/45 (71%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FTS QL ELE F R YPD+ TREE+A+ LTEA
Sbjct: 36 RKQRRYRTTFTSYQLDELEKAFGRTHYPDVFTREELALKIGLTEA 80
>gi|260786572|ref|XP_002588331.1| hypothetical protein BRAFLDRAFT_224472 [Branchiostoma floridae]
gi|229273492|gb|EEN44342.1| hypothetical protein BRAFLDRAFT_224472 [Branchiostoma floridae]
Length = 149
Score = 57.8 bits (138), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FTS QL+ELE FA YPD+ TREE+A+ +LTEA
Sbjct: 98 RKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEA 142
>gi|440808062|gb|AGC24174.1| Drgx [Lymnaea stagnalis]
Length = 416
Score = 57.8 bits (138), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT QQL+ELE FA+ YPD+ RE++AM NLTEA
Sbjct: 46 RKQRRNRTTFTLQQLEELEKAFAQTHYPDVFMREDLAMRINLTEA 90
>gi|307182442|gb|EFN69677.1| Paired mesoderm homeobox protein 2B [Camponotus floridanus]
Length = 368
Score = 57.8 bits (138), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 33/45 (73%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FTS QL+ELE F YPD+ TREEIAM +LTEA
Sbjct: 137 RKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEA 181
>gi|344281094|ref|XP_003412315.1| PREDICTED: homeobox protein aristaless-like 4-like [Loxodonta
africana]
Length = 406
Score = 57.8 bits (138), Expect = 9e-07, Method: Composition-based stats.
Identities = 29/66 (43%), Positives = 42/66 (63%), Gaps = 3/66 (4%)
Query: 29 EDSSAKDSSS---NSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMW 85
+D ++ D S + + N ++RR RT FTS QL+ELE F + YPD+ RE++AM
Sbjct: 186 QDRASADLPSPLEKADSESNKGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMR 245
Query: 86 TNLTEA 91
T+LTEA
Sbjct: 246 TDLTEA 251
>gi|126010754|gb|AAI33553.1| VSX1 protein [Bos taurus]
Length = 236
Score = 57.8 bits (138), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 27 SIEDSSAKDSSSNSKNTKNSKRQ-RRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMW 85
S EDS ++D S + SKR+ RR RT FT+ QL+ELE F+ YPD+ RE +AM
Sbjct: 141 SDEDSPSEDRSDRKASPAPSKRKKRRHRTVFTAHQLEELEKAFSEAHYPDVYAREMLAMK 200
Query: 86 TNLTE 90
T L E
Sbjct: 201 TELPE 205
>gi|440907876|gb|ELR57965.1| Paired mesoderm homeobox protein 2A, partial [Bos grunniens mutus]
Length = 155
Score = 57.8 bits (138), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 3/86 (3%)
Query: 9 PIEPLIGNIKTELS---NHNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELE 65
P P +G+ L +H + + ++QRR RT FTS QL+ELE
Sbjct: 48 PPCPALGSSNCALGALRDHQPAPYSAVPYKFFPEPSGLHEKRKQRRIRTTFTSAQLKELE 107
Query: 66 ATFARNRYPDMSTREEIAMWTNLTEA 91
FA YPD+ TREE+A+ +LTEA
Sbjct: 108 RVFAETHYPDIYTREELALKIDLTEA 133
>gi|62414116|ref|NP_001014818.1| paired mesoderm homeobox protein 2B [Danio rerio]
gi|326673538|ref|XP_003199912.1| PREDICTED: paired mesoderm homeobox protein 2B-like [Danio rerio]
gi|56900854|gb|AAW31722.1| paired-like homeobox 2b [Danio rerio]
gi|190337114|gb|AAI62881.1| Paired-like homeobox 2b [Danio rerio]
gi|190339584|gb|AAI62887.1| Paired-like homeobox 2b [Danio rerio]
Length = 284
Score = 57.8 bits (138), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FTS QL+ELE FA YPD+ TREE+A+ +LTEA
Sbjct: 96 RKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEA 140
>gi|71892442|ref|NP_001025475.1| homeobox protein aristaless-like 4 [Bos taurus]
gi|109940203|sp|Q4LAL6.1|ALX4_BOVIN RecName: Full=Homeobox protein aristaless-like 4
gi|70561331|emb|CAJ14976.1| aristaless-like homeobox 4 [Bos taurus]
Length = 397
Score = 57.8 bits (138), Expect = 9e-07, Method: Composition-based stats.
Identities = 29/66 (43%), Positives = 42/66 (63%), Gaps = 3/66 (4%)
Query: 29 EDSSAKDSSS---NSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMW 85
+D ++ D S + + N ++RR RT FTS QL+ELE F + YPD+ RE++AM
Sbjct: 177 QDRASADLPSPMEKADSESNKGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMR 236
Query: 86 TNLTEA 91
T+LTEA
Sbjct: 237 TDLTEA 242
>gi|224080279|ref|XP_002189321.1| PREDICTED: paired box protein Pax-7-like, partial [Taeniopygia
guttata]
gi|327292272|ref|XP_003230844.1| PREDICTED: paired box protein Pax-7-like, partial [Anolis
carolinensis]
gi|120974931|gb|ABM46764.1| PAX7 [Gorilla gorilla]
gi|121484047|gb|ABM54349.1| PAX7 [Pan paniscus]
gi|339791146|gb|AEK12234.1| transcription factor pax7 [Bos taurus]
gi|339791148|gb|AEK12235.1| transcription factor pax7 [Bos taurus]
Length = 66
Score = 57.8 bits (138), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT++QL+ELE F R YPD+ TREE+A T LTEA
Sbjct: 19 RKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEA 63
>gi|195380433|ref|XP_002048975.1| GJ21339 [Drosophila virilis]
gi|194143772|gb|EDW60168.1| GJ21339 [Drosophila virilis]
Length = 464
Score = 57.8 bits (138), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 36/45 (80%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT++QL+ LE F+R +YPD+ TREE+A T+LTEA
Sbjct: 180 RKQRRSRTTFTAEQLEALERAFSRTQYPDVYTREELAQTTSLTEA 224
>gi|47227513|emb|CAG04661.1| unnamed protein product [Tetraodon nigroviridis]
Length = 285
Score = 57.8 bits (138), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FTS QL+ELE FA YPD+ TREE+A+ +LTEA
Sbjct: 96 RKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEA 140
>gi|260802230|ref|XP_002595995.1| hypothetical protein BRAFLDRAFT_84069 [Branchiostoma floridae]
gi|229281249|gb|EEN52007.1| hypothetical protein BRAFLDRAFT_84069 [Branchiostoma floridae]
Length = 406
Score = 57.8 bits (138), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 14 IGNIKTELSNHNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRY 73
+G +K E +D I + K ++QRR RT FTS QL+ELE FA Y
Sbjct: 94 VGALKDE---RHDYITVAQYKLFHDGPPGLHEKRKQRRIRTTFTSAQLKELERVFAETHY 150
Query: 74 PDMSTREEIAMWTNLTEA 91
PD+ TREE+A+ +LTEA
Sbjct: 151 PDIYTREELALKIDLTEA 168
>gi|195124301|ref|XP_002006632.1| GI18478 [Drosophila mojavensis]
gi|193911700|gb|EDW10567.1| GI18478 [Drosophila mojavensis]
Length = 464
Score = 57.8 bits (138), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 36/45 (80%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT++QL+ LE F+R +YPD+ TREE+A T+LTEA
Sbjct: 180 RKQRRSRTTFTAEQLEALERAFSRTQYPDVYTREELAQTTSLTEA 224
>gi|410973607|ref|XP_003993239.1| PREDICTED: homeobox protein aristaless-like 4 [Felis catus]
Length = 408
Score = 57.4 bits (137), Expect = 9e-07, Method: Composition-based stats.
Identities = 29/66 (43%), Positives = 42/66 (63%), Gaps = 3/66 (4%)
Query: 29 EDSSAKDSSS---NSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMW 85
+D ++ D S + + N ++RR RT FTS QL+ELE F + YPD+ RE++AM
Sbjct: 188 QDRASADLPSPLDKADSESNKGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMR 247
Query: 86 TNLTEA 91
T+LTEA
Sbjct: 248 TDLTEA 253
>gi|403254633|ref|XP_003920066.1| PREDICTED: homeobox protein aristaless-like 4 [Saimiri boliviensis
boliviensis]
Length = 394
Score = 57.4 bits (137), Expect = 9e-07, Method: Composition-based stats.
Identities = 29/66 (43%), Positives = 42/66 (63%), Gaps = 3/66 (4%)
Query: 29 EDSSAKDSSS---NSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMW 85
+D ++ D S + + N ++RR RT FTS QL+ELE F + YPD+ RE++AM
Sbjct: 174 QDRASSDLPSPLEKADSESNKGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMR 233
Query: 86 TNLTEA 91
T+LTEA
Sbjct: 234 TDLTEA 239
>gi|331271832|gb|AED02521.1| paired box 7 protein [Coturnix japonica]
Length = 248
Score = 57.4 bits (137), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT++QL+ELE F R YPD+ TREE+A T LTEA
Sbjct: 86 RKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEA 130
>gi|426218705|ref|XP_004003579.1| PREDICTED: diencephalon/mesencephalon homeobox protein 1 [Ovis
aries]
Length = 501
Score = 57.4 bits (137), Expect = 9e-07, Method: Composition-based stats.
Identities = 26/45 (57%), Positives = 33/45 (73%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT+QQL+ LE TF + YPD+ RE +AM TNL EA
Sbjct: 244 RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEA 288
>gi|24762822|ref|NP_523862.1| gooseberry-neuro [Drosophila melanogaster]
gi|27923971|sp|P09083.2|GSBN_DROME RecName: Full=Protein gooseberry-neuro; AltName: Full=BSH4;
AltName: Full=Protein gooseberry proximal
gi|7291896|gb|AAF47314.1| gooseberry-neuro [Drosophila melanogaster]
gi|17946362|gb|AAL49215.1| RE64348p [Drosophila melanogaster]
gi|220945952|gb|ACL85519.1| gsb-n-PA [synthetic construct]
gi|220952700|gb|ACL88893.1| gsb-n-PA [synthetic construct]
Length = 449
Score = 57.4 bits (137), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 35/45 (77%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT++QL+ LE F+R +YPD+ TREE+A T LTEA
Sbjct: 180 RKQRRSRTTFTAEQLEALERAFSRTQYPDVYTREELAQTTALTEA 224
>gi|340726685|ref|XP_003401684.1| PREDICTED: hypothetical protein LOC100649005 [Bombus terrestris]
Length = 314
Score = 57.4 bits (137), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 33/45 (73%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FTS QL+ELE F YPD+ TREEIAM +LTEA
Sbjct: 136 RKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEA 180
>gi|345482144|ref|XP_001603519.2| PREDICTED: hypothetical protein LOC100119801 [Nasonia vitripennis]
Length = 461
Score = 57.4 bits (137), Expect = 9e-07, Method: Composition-based stats.
Identities = 27/45 (60%), Positives = 35/45 (77%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT QQL+ELE+ F + YPD+ TRE++AM NLTEA
Sbjct: 94 RKQRRNRTTFTLQQLEELESAFVQTHYPDVFTREDLAMKINLTEA 138
>gi|291384330|ref|XP_002708569.1| PREDICTED: paired-like homeobox 2a-like [Oryctolagus cuniculus]
Length = 290
Score = 57.4 bits (137), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FTS QL+ELE FA YPD+ TREE+A+ +LTEA
Sbjct: 93 RKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEA 137
>gi|403300665|ref|XP_003941040.1| PREDICTED: paired mesoderm homeobox protein 2B [Saimiri boliviensis
boliviensis]
Length = 242
Score = 57.4 bits (137), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FTS QL+ELE FA YPD+ TREE+A+ +LTEA
Sbjct: 96 RKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEA 140
>gi|260787658|ref|XP_002588869.1| hypothetical protein BRAFLDRAFT_235895 [Branchiostoma floridae]
gi|229274040|gb|EEN44880.1| hypothetical protein BRAFLDRAFT_235895 [Branchiostoma floridae]
Length = 76
Score = 57.4 bits (137), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 35/45 (77%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT QL++LEA FA+ YPD+ TREE+AM NLTEA
Sbjct: 7 RKQRRNRTTFTLHQLEQLEAVFAQTHYPDVFTREELAMKINLTEA 51
>gi|449270500|gb|EMC81167.1| Paired mesoderm homeobox protein 2A, partial [Columba livia]
Length = 178
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 36/54 (66%)
Query: 38 SNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
S+ ++QRR RT FTS QL+ELE FA YPD+ TREE+A+ +LTEA
Sbjct: 7 SDPSGINEKRKQRRIRTTFTSSQLKELERVFAETHYPDIYTREELALKIDLTEA 60
>gi|449485972|ref|XP_004175263.1| PREDICTED: LOW QUALITY PROTEIN: paired mesoderm homeobox protein
2A, partial [Taeniopygia guttata]
Length = 221
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FTS QL+ELE FA YPD+ TREE+A+ +LTEA
Sbjct: 32 RKQRRIRTTFTSSQLKELERVFAETHYPDIYTREELALKIDLTEA 76
>gi|62131821|gb|AAX68745.1| paired-like homeobox 2b [Danio rerio]
Length = 285
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FTS QL+ELE FA YPD+ TREE+A+ +LTEA
Sbjct: 95 RKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEA 139
>gi|440897881|gb|ELR49486.1| Homeobox protein aristaless-like 4, partial [Bos grunniens mutus]
Length = 385
Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 29/66 (43%), Positives = 42/66 (63%), Gaps = 3/66 (4%)
Query: 29 EDSSAKDSSS---NSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMW 85
+D ++ D S + + N ++RR RT FTS QL+ELE F + YPD+ RE++AM
Sbjct: 165 QDRASADLPSPMEKADSESNKGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMR 224
Query: 86 TNLTEA 91
T+LTEA
Sbjct: 225 TDLTEA 230
>gi|47551253|ref|NP_999809.1| aristaless-like homeobox protein [Strongylocentrotus purpuratus]
gi|30841695|gb|AAP34698.1| aristaless-like homeobox protein [Strongylocentrotus purpuratus]
Length = 430
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Query: 31 SSAKDSSSNSKNTKNSKRQ-RRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLT 89
S D + KN ++KR+ RR RT FTS QL+E+E F R YPD+ RE++A+ +LT
Sbjct: 99 SPMGDPKDDDKNDSDAKRKKRRNRTTFTSYQLEEMEKVFQRTHYPDVYCREQLALRCDLT 158
Query: 90 EA 91
EA
Sbjct: 159 EA 160
>gi|194667831|ref|XP_001252231.2| PREDICTED: paired mesoderm homeobox protein 2B [Bos taurus]
Length = 314
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FTS QL+ELE FA YPD+ TREE+A+ +LTEA
Sbjct: 96 RKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEA 140
>gi|120975015|gb|ABM46803.1| ALX4 [Gorilla gorilla]
Length = 103
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 34/47 (72%)
Query: 45 NSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
N ++RR RT FTS QL+ELE F + YPD+ RE++AM T+LTEA
Sbjct: 54 NKGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEA 100
>gi|391338532|ref|XP_003743612.1| PREDICTED: uncharacterized protein LOC100897599 [Metaseiulus
occidentalis]
Length = 869
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 34/48 (70%)
Query: 44 KNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
K S +Q+R RT FT QLQELE +F++ YPD+ REE+AM LTE+
Sbjct: 66 KPSSKQKRHRTRFTPAQLQELERSFSKTHYPDIFMREELAMRIGLTES 113
>gi|357614287|gb|EHJ69003.1| paired-like family homeodomain transcription factor [Danaus
plexippus]
Length = 258
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 32/45 (71%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FTS QL ELE F R YPD+ TREE+A+ LTEA
Sbjct: 36 RKQRRYRTTFTSYQLDELEKAFGRTHYPDVFTREELALKIGLTEA 80
>gi|383854529|ref|XP_003702773.1| PREDICTED: paired box protein Pax-3-B-like [Megachile rotundata]
Length = 483
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 33/45 (73%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT+ QL ELE F R +YPD+ TREE+A T LTEA
Sbjct: 167 RKQRRSRTTFTAHQLDELERAFERTQYPDIYTREELAQRTKLTEA 211
>gi|354505900|ref|XP_003515005.1| PREDICTED: paired mesoderm homeobox protein 2B-like, partial
[Cricetulus griseus]
Length = 148
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FTS QL+ELE FA YPD+ TREE+A+ +LTEA
Sbjct: 96 RKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEA 140
>gi|348511737|ref|XP_003443400.1| PREDICTED: paired mesoderm homeobox protein 2B-like [Oreochromis
niloticus]
Length = 285
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FTS QL+ELE FA YPD+ TREE+A+ +LTEA
Sbjct: 96 RKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEA 140
>gi|405963382|gb|EKC28959.1| Uncharacterized protein C3orf32 [Crassostrea gigas]
Length = 1064
Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/45 (60%), Positives = 33/45 (73%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT+QQL LE TFA+ YPD+ RE +AM TNL EA
Sbjct: 786 RKQRRCRTAFTNQQLSTLEKTFAKTHYPDVVMRERLAMMTNLPEA 830
>gi|124054328|gb|ABM89379.1| PAX7 [Pongo pygmaeus]
Length = 189
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT++QL+ELE F R YPD+ TREE+A T LTEA
Sbjct: 19 RKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEA 63
>gi|2583019|gb|AAB82744.1| ARIX homeodomain protein [Homo sapiens]
Length = 284
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 45/86 (52%), Gaps = 3/86 (3%)
Query: 9 PIEPLIGNIKTELS---NHNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELE 65
P P +G+ L +H + + + ++QRR RT FTS QL+ELE
Sbjct: 47 PPCPALGSSNCALGALRDHQPAPYSAVPYNFFPEPSGLHEKRKQRRIRTTFTSAQLKELE 106
Query: 66 ATFARNRYPDMSTREEIAMWTNLTEA 91
FA YPD+ TREE+A+ +LTEA
Sbjct: 107 RVFAETHYPDIYTREELALKIDLTEA 132
>gi|355002465|gb|AER51857.1| cone-rod homeobox, partial [Rousettus leschenaultii]
Length = 285
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 33/44 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTE 90
++QRR+RT FT QL+ELEA FA +YPD+ REE+A+ NL E
Sbjct: 29 RKQRRERTTFTRSQLEELEALFAETQYPDVYAREEVALKINLPE 72
>gi|321453327|gb|EFX64572.1| hypothetical protein DAPPUDRAFT_15023 [Daphnia pulex]
Length = 202
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Query: 21 LSNHNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTRE 80
L + S D D S T ++QRR RT F+++QL+ELE +F R +YPD+ TRE
Sbjct: 115 LCVYTGSSSDCDLSDIESEPGITLK-RKQRRSRTTFSAEQLEELERSFERTQYPDVYTRE 173
Query: 81 EIAMWTNLTEA 91
E+A T LTEA
Sbjct: 174 ELAQKTKLTEA 184
>gi|195489906|ref|XP_002092936.1| GE11387 [Drosophila yakuba]
gi|194179037|gb|EDW92648.1| GE11387 [Drosophila yakuba]
Length = 449
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 35/45 (77%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT++QL+ LE F+R +YPD+ TREE+A T LTEA
Sbjct: 180 RKQRRSRTTFTAEQLEALERAFSRTQYPDVYTREELAQTTALTEA 224
>gi|195353358|ref|XP_002043172.1| GM11765 [Drosophila sechellia]
gi|195586619|ref|XP_002083071.1| GD24898 [Drosophila simulans]
gi|194127260|gb|EDW49303.1| GM11765 [Drosophila sechellia]
gi|194195080|gb|EDX08656.1| GD24898 [Drosophila simulans]
Length = 449
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 35/45 (77%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT++QL+ LE F+R +YPD+ TREE+A T LTEA
Sbjct: 180 RKQRRSRTTFTAEQLEALERAFSRTQYPDVYTREELAQTTALTEA 224
>gi|170045356|ref|XP_001850278.1| paired box protein [Culex quinquefasciatus]
gi|167868438|gb|EDS31821.1| paired box protein [Culex quinquefasciatus]
Length = 479
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 33/45 (73%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FTS QL+ELE F YPD+ TREEIAM +LTEA
Sbjct: 88 RKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEA 132
>gi|432960958|ref|XP_004086512.1| PREDICTED: paired mesoderm homeobox protein 2B-like [Oryzias
latipes]
Length = 285
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FTS QL+ELE FA YPD+ TREE+A+ +LTEA
Sbjct: 96 RKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEA 140
>gi|344258328|gb|EGW14432.1| Paired mesoderm homeobox protein 2B [Cricetulus griseus]
Length = 182
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FTS QL+ELE FA YPD+ TREE+A+ +LTEA
Sbjct: 96 RKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEA 140
>gi|24580629|ref|NP_722629.1| aristaless [Drosophila melanogaster]
gi|60416352|sp|Q06453.2|AL_DROME RecName: Full=Homeobox protein aristaless
gi|7296213|gb|AAF51505.1| aristaless [Drosophila melanogaster]
gi|21464440|gb|AAM52023.1| RE68460p [Drosophila melanogaster]
gi|220942482|gb|ACL83784.1| al-PA [synthetic construct]
gi|220952686|gb|ACL88886.1| al-PA [synthetic construct]
Length = 408
Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/45 (62%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FTS QL+ELE F+R YPD+ TREE+AM LTEA
Sbjct: 83 RKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAMKIGLTEA 127
>gi|290262|gb|AAA28840.1| prd-like homeobox protein [Drosophila melanogaster]
Length = 408
Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/45 (62%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FTS QL+ELE F+R YPD+ TREE+AM LTEA
Sbjct: 83 RKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAMKIGLTEA 127
>gi|395856674|ref|XP_003800746.1| PREDICTED: uncharacterized protein LOC100945104 isoform 1 [Otolemur
garnettii]
Length = 279
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FTS QL+ELE FA YPD+ TREE+A+ +LTEA
Sbjct: 96 RKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEA 140
>gi|395518788|ref|XP_003763539.1| PREDICTED: homeobox protein ARX [Sarcophilus harrisii]
Length = 339
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 36/51 (70%)
Query: 41 KNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
+ +++QRR RT FTS QL+ELE F + YPD+ TREE+AM +LTEA
Sbjct: 97 QGAAAARKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRLDLTEA 147
>gi|356582262|ref|NP_001239128.1| paired-like homeobox 2a [Xenopus (Silurana) tropicalis]
Length = 281
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FTS QL+ELE FA YPD+ TREE+A+ +LTEA
Sbjct: 90 RKQRRIRTTFTSSQLKELERVFAETHYPDIYTREELALKIDLTEA 134
>gi|148224192|ref|NP_001084385.1| paired-like homeobox 2a [Xenopus laevis]
gi|38425325|gb|AAR19764.1| homeodomain protein [Xenopus laevis]
gi|115529155|gb|AAI24892.1| Phox2a protein [Xenopus laevis]
Length = 281
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FTS QL+ELE FA YPD+ TREE+A+ +LTEA
Sbjct: 90 RKQRRIRTTFTSSQLKELERVFAETHYPDIYTREELALKIDLTEA 134
>gi|334327857|ref|XP_001369519.2| PREDICTED: paired mesoderm homeobox protein 2A-like [Monodelphis
domestica]
Length = 234
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 36/54 (66%)
Query: 38 SNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
S+ ++QRR RT FTS QL+ELE FA YPD+ TREE+A+ +LTEA
Sbjct: 22 SDPSGLSEKRKQRRIRTTFTSSQLKELERVFAETHYPDIYTREELALKIDLTEA 75
>gi|229915297|gb|ACQ90719.1| orthodenticle protein [Artemia sinica]
Length = 395
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 34/47 (72%)
Query: 45 NSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
NS++QRR+RT FT QL LEA F + RYPD+ REE+A+ NL E+
Sbjct: 100 NSRKQRRERTTFTRGQLDVLEALFGKTRYPDIFMREEVALKINLPES 146
>gi|124054602|gb|ABM89502.1| Pax3 [Scyliorhinus canicula]
Length = 319
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 33/45 (73%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT++QL+ELE F R YPD+ TREE+A LTEA
Sbjct: 123 RKQRRSRTTFTAEQLEELERAFGRTHYPDIYTREELAQRAKLTEA 167
>gi|444519265|gb|ELV12700.1| Diencephalon/mesencephalon homeobox protein 1 [Tupaia chinensis]
Length = 248
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 33/45 (73%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT+QQL+ LE TF + YPD+ RE +AM TNL EA
Sbjct: 27 RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEA 71
>gi|403284219|ref|XP_003933476.1| PREDICTED: homeobox protein aristaless-like 3 [Saimiri boliviensis
boliviensis]
Length = 343
Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/48 (50%), Positives = 35/48 (72%)
Query: 44 KNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
KN ++RR RT F++ QL+ELE F + YPD+ RE++A+ T+LTEA
Sbjct: 148 KNKSKKRRNRTTFSTFQLEELEKVFQKTHYPDVYAREQLALRTDLTEA 195
>gi|395856676|ref|XP_003800747.1| PREDICTED: uncharacterized protein LOC100945104 isoform 2 [Otolemur
garnettii]
Length = 281
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FTS QL+ELE FA YPD+ TREE+A+ +LTEA
Sbjct: 96 RKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEA 140
>gi|242019572|ref|XP_002430234.1| Paired mesoderm homeobox protein 2B, putative [Pediculus humanus
corporis]
gi|212515334|gb|EEB17496.1| Paired mesoderm homeobox protein 2B, putative [Pediculus humanus
corporis]
Length = 168
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 33/45 (73%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FTS QL+ELE F YPD+ TREEIAM +LTEA
Sbjct: 25 RKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEA 69
>gi|156401270|ref|XP_001639214.1| predicted protein [Nematostella vectensis]
gi|156226341|gb|EDO47151.1| predicted protein [Nematostella vectensis]
Length = 75
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
Query: 35 DSSSNSKNTKNSKR-QRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
D S+S+N +R QRR RT FT QQLQELE F + YPD++ REE+A N++EA
Sbjct: 1 DHGSDSENPATVRRKQRRNRTTFTKQQLQELEKVFEKKHYPDIALREELAAKINISEA 58
>gi|4102043|gb|AAD01418.1| homeobox protein [Homo sapiens]
Length = 343
Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/48 (50%), Positives = 35/48 (72%)
Query: 44 KNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
KN ++RR RT F++ QL+ELE F + YPD+ RE++A+ T+LTEA
Sbjct: 148 KNKSKKRRNRTTFSTFQLEELEKVFQKTHYPDVYAREQLALRTDLTEA 195
>gi|113204604|ref|NP_006483.2| homeobox protein aristaless-like 3 [Homo sapiens]
gi|426330701|ref|XP_004026345.1| PREDICTED: homeobox protein aristaless-like 3 [Gorilla gorilla
gorilla]
gi|215273931|sp|O95076.2|ALX3_HUMAN RecName: Full=Homeobox protein aristaless-like 3; AltName:
Full=Proline-rich transcription factor ALX3
gi|85566666|gb|AAI12008.1| ALX3 protein [Homo sapiens]
gi|109731688|gb|AAI13429.1| ALX homeobox 3 [Homo sapiens]
gi|119576834|gb|EAW56430.1| aristaless-like homeobox 3 [Homo sapiens]
Length = 343
Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/48 (50%), Positives = 35/48 (72%)
Query: 44 KNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
KN ++RR RT F++ QL+ELE F + YPD+ RE++A+ T+LTEA
Sbjct: 148 KNKSKKRRNRTTFSTFQLEELEKVFQKTHYPDVYAREQLALRTDLTEA 195
>gi|348555401|ref|XP_003463512.1| PREDICTED: paired mesoderm homeobox protein 2A-like [Cavia
porcellus]
Length = 285
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FTS QL+ELE FA YPD+ TREE+A+ +LTEA
Sbjct: 88 RKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEA 132
>gi|307205017|gb|EFN83540.1| Paired mesoderm homeobox protein 2B [Harpegnathos saltator]
Length = 223
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 33/45 (73%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FTS QL+ELE F YPD+ TREEIAM +LTEA
Sbjct: 143 RKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEA 187
>gi|402894541|ref|XP_003910413.1| PREDICTED: paired mesoderm homeobox protein 2A [Papio anubis]
Length = 284
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FTS QL+ELE FA YPD+ TREE+A+ +LTEA
Sbjct: 88 RKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEA 132
>gi|158290000|ref|XP_559100.2| AGAP010358-PA [Anopheles gambiae str. PEST]
gi|157018429|gb|EAL41046.2| AGAP010358-PA [Anopheles gambiae str. PEST]
Length = 314
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 29 EDSSAKDSSSNSKNTKNSKR-QRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTN 87
E S +DS + S+ KR QRR RT F +QL+ LE F+R +YPD+ TREE+A T
Sbjct: 164 ESSCDEDSDTESEPGITLKRKQRRSRTTFNGEQLEALEIAFSRTQYPDVYTREELAQKTK 223
Query: 88 LTEA 91
LTEA
Sbjct: 224 LTEA 227
>gi|73974940|ref|XP_852840.1| PREDICTED: paired mesoderm homeobox protein 2B [Canis lupus
familiaris]
Length = 314
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FTS QL+ELE FA YPD+ TREE+A+ +LTEA
Sbjct: 96 RKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEA 140
>gi|46249382|ref|NP_005160.2| paired mesoderm homeobox protein 2A [Homo sapiens]
gi|297689630|ref|XP_002822248.1| PREDICTED: paired mesoderm homeobox protein 2A [Pongo abelii]
gi|77416873|sp|O14813.2|PHX2A_HUMAN RecName: Full=Paired mesoderm homeobox protein 2A; AltName:
Full=ARIX1 homeodomain protein; AltName: Full=Aristaless
homeobox protein homolog; AltName: Full=Paired-like
homeobox 2A
gi|27371330|gb|AAH41564.1| Paired-like homeobox 2a [Homo sapiens]
gi|119595262|gb|EAW74856.1| paired-like (aristaless) homeobox 2a [Homo sapiens]
gi|158254722|dbj|BAF83334.1| unnamed protein product [Homo sapiens]
gi|167773113|gb|ABZ91991.1| paired-like homeobox 2a [synthetic construct]
Length = 284
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FTS QL+ELE FA YPD+ TREE+A+ +LTEA
Sbjct: 88 RKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEA 132
>gi|149068721|gb|EDM18273.1| paired-like homeobox 2a [Rattus norvegicus]
Length = 281
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FTS QL+ELE FA YPD+ TREE+A+ +LTEA
Sbjct: 88 RKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEA 132
>gi|6679399|ref|NP_032913.1| paired mesoderm homeobox protein 2A [Mus musculus]
gi|6093752|sp|Q62066.1|PHX2A_MOUSE RecName: Full=Paired mesoderm homeobox protein 2A; AltName:
Full=Aristaless homeobox protein homolog; AltName:
Full=PHOX2A homeodomain protein; AltName:
Full=Paired-like homeobox 2A
gi|402642|emb|CAA52923.1| Phox2 homeodomain protein [Mus musculus]
gi|225000420|gb|AAI72722.1| Paired-like homeobox 2a [synthetic construct]
gi|225000566|gb|AAI72615.1| Paired-like homeobox 2a [synthetic construct]
Length = 280
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FTS QL+ELE FA YPD+ TREE+A+ +LTEA
Sbjct: 88 RKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEA 132
>gi|348523580|ref|XP_003449301.1| PREDICTED: paired mesoderm homeobox protein 2A-like [Oreochromis
niloticus]
Length = 301
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FTS QL+ELE FA YPD+ TREE+A+ +LTEA
Sbjct: 90 RKQRRIRTTFTSSQLKELERVFAETHYPDIYTREELALKIDLTEA 134
>gi|297475806|ref|XP_002688259.1| PREDICTED: paired mesoderm homeobox protein 2B [Bos taurus]
gi|296486633|tpg|DAA28746.1| TPA: paired-like homeobox 2b-like [Bos taurus]
Length = 315
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FTS QL+ELE FA YPD+ TREE+A+ +LTEA
Sbjct: 96 RKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEA 140
>gi|296196663|ref|XP_002745937.1| PREDICTED: paired mesoderm homeobox protein 2B [Callithrix jacchus]
Length = 314
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FTS QL+ELE FA YPD+ TREE+A+ +LTEA
Sbjct: 96 RKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEA 140
>gi|218675700|gb|AAI69334.2| aristaless related homeobox [synthetic construct]
Length = 248
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 39/56 (69%)
Query: 36 SSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
+ S+S+ ++QRR RT FTS QL+ELE F + YPD+ TREE+AM +LTEA
Sbjct: 1 AGSDSEEGLLKRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRLDLTEA 56
>gi|189236734|ref|XP_001815189.1| PREDICTED: similar to paired box protein [Tribolium castaneum]
Length = 268
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 33/45 (73%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FTS QL+ELE F YPD+ TREEIAM +LTEA
Sbjct: 41 RKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEA 85
>gi|189240573|ref|XP_974212.2| PREDICTED: similar to AGAP010358-PA [Tribolium castaneum]
Length = 410
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 49/89 (55%), Gaps = 10/89 (11%)
Query: 13 LIGNIKTELSNHNDSIE---------DSSAKDSSSNSKNTKNSKR-QRRQRTHFTSQQLQ 62
L G K + N SIE +SS +S + S+ KR QRR RT FT +QL+
Sbjct: 142 LRGGRKEDPDRKNHSIEGILGEQAHTNSSCDESDTESEPGIPLKRKQRRSRTTFTGEQLE 201
Query: 63 ELEATFARNRYPDMSTREEIAMWTNLTEA 91
LE F R +YPD+ TREE+A T LTEA
Sbjct: 202 ALERAFGRTQYPDVYTREELAQKTKLTEA 230
>gi|53791211|dbj|BAD54702.1| transcription factor [Rattus norvegicus]
Length = 281
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FTS QL+ELE FA YPD+ TREE+A+ +LTEA
Sbjct: 88 RKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEA 132
>gi|403263094|ref|XP_003923895.1| PREDICTED: paired mesoderm homeobox protein 2A [Saimiri boliviensis
boliviensis]
Length = 247
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FTS QL+ELE FA YPD+ TREE+A+ +LTEA
Sbjct: 88 RKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEA 132
>gi|395814903|ref|XP_003780977.1| PREDICTED: paired mesoderm homeobox protein 2A [Otolemur garnettii]
Length = 284
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FTS QL+ELE FA YPD+ TREE+A+ +LTEA
Sbjct: 88 RKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEA 132
>gi|354491350|ref|XP_003507818.1| PREDICTED: homeobox protein aristaless-like 4-like [Cricetulus
griseus]
Length = 319
Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 30/66 (45%), Positives = 42/66 (63%), Gaps = 3/66 (4%)
Query: 29 EDSSAKDSSSNSKNT---KNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMW 85
+D ++ D S + T N ++RR RT FTS QL+ELE F + YPD+ RE++AM
Sbjct: 99 QDRASADIPSPLEKTDSESNKGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMR 158
Query: 86 TNLTEA 91
T+LTEA
Sbjct: 159 TDLTEA 164
>gi|229915295|gb|ACQ90718.1| orthodenticle protein [Artemia sinica]
Length = 354
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 34/47 (72%)
Query: 45 NSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
NS++QRR+RT FT QL LEA F + RYPD+ REE+A+ NL E+
Sbjct: 59 NSRKQRRERTTFTRGQLDVLEALFGKTRYPDIFMREEVALKINLPES 105
>gi|431915726|gb|ELK16059.1| Homeobox protein aristaless-like 4 [Pteropus alecto]
Length = 195
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 34/47 (72%)
Query: 45 NSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
N ++RR RT FTS QL+ELE F + YPD+ RE++AM T+LTEA
Sbjct: 125 NKGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEA 171
>gi|297664163|ref|XP_002810521.1| PREDICTED: homeobox protein aristaless-like 3 [Pongo abelii]
Length = 343
Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/48 (50%), Positives = 35/48 (72%)
Query: 44 KNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
KN ++RR RT F++ QL+ELE F + YPD+ RE++A+ T+LTEA
Sbjct: 148 KNKSKKRRNRTTFSTFQLEELEKVFQKTHYPDVYAREQLALRTDLTEA 195
>gi|291385705|ref|XP_002709324.1| PREDICTED: paired-like homeobox 2b [Oryctolagus cuniculus]
Length = 250
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FTS QL+ELE FA YPD+ TREE+A+ +LTEA
Sbjct: 96 RKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEA 140
>gi|49903856|gb|AAH76069.1| Pax3a protein [Danio rerio]
Length = 445
Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 26/45 (57%), Positives = 33/45 (73%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT++QL+ELE F R YPD+ TREE+A LTEA
Sbjct: 218 RKQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEA 262
>gi|198475763|ref|XP_001357148.2| GA19807 [Drosophila pseudoobscura pseudoobscura]
gi|198137948|gb|EAL34215.2| GA19807 [Drosophila pseudoobscura pseudoobscura]
Length = 646
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT F++ QL ELE F R +YPD+ TREE+A TNLTEA
Sbjct: 215 RKQRRCRTTFSAAQLDELERAFERTQYPDIYTREELAQRTNLTEA 259
>gi|325980258|gb|ADZ48388.1| Phox2b [Polyodon spathula]
Length = 248
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FTS QL+ELE FA YPD+ TREE+A+ +LTEA
Sbjct: 85 RKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEA 129
>gi|410969539|ref|XP_003991252.1| PREDICTED: uncharacterized protein LOC101082767 [Felis catus]
Length = 1024
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 26/45 (57%), Positives = 33/45 (73%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT++QL+ELE F R YPD+ TREE+A LTEA
Sbjct: 736 RKQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEA 780
>gi|328782878|ref|XP_003250208.1| PREDICTED: paired box protein Pax-3-B [Apis mellifera]
Length = 531
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 33/45 (73%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT+ QL ELE F R +YPD+ TREE+A T LTEA
Sbjct: 215 RKQRRSRTTFTAHQLDELERAFERTQYPDIYTREELAQRTKLTEA 259
>gi|440891870|gb|ELR45335.1| Paired mesoderm homeobox protein 2B, partial [Bos grunniens mutus]
Length = 212
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FTS QL+ELE FA YPD+ TREE+A+ +LTEA
Sbjct: 96 RKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEA 140
>gi|405972244|gb|EKC37023.1| Retinal homeobox protein Rx [Crassostrea gigas]
Length = 987
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 33/46 (71%)
Query: 46 SKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
+K+QRR RT FTS QL+ELEA F YPD + RE+IA +LTEA
Sbjct: 63 AKKQRRNRTTFTSDQLRELEAVFQHTHYPDCTLREQIAEKVDLTEA 108
>gi|301789383|ref|XP_002930110.1| PREDICTED: hypothetical protein LOC100482646 [Ailuropoda
melanoleuca]
Length = 638
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/45 (62%), Positives = 31/45 (68%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
+ QRR RT FT QLQELE F R +YPD+ REEIA NLTEA
Sbjct: 470 RNQRRYRTAFTQLQLQELEGVFHRTQYPDVFAREEIAGRLNLTEA 514
>gi|170572557|ref|XP_001892152.1| homeobox protein [Brugia malayi]
gi|158602775|gb|EDP39026.1| homeobox protein, putative [Brugia malayi]
Length = 286
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 39/65 (60%)
Query: 27 SIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWT 86
I+ SS + N ++QRR RT FTS QL+ELE F YPD+ TRE++AM
Sbjct: 154 GIQGSSLVGAICGRNNPMERRKQRRIRTTFTSGQLKELERAFLETHYPDIYTREDLAMRI 213
Query: 87 NLTEA 91
+LTEA
Sbjct: 214 DLTEA 218
>gi|321453331|gb|EFX64576.1| hypothetical protein DAPPUDRAFT_334067 [Daphnia pulex]
Length = 265
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 37/49 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEALRET 95
++QRR RT F++ QL+ELE F R++YPD+ TREE+A T LTEA +T
Sbjct: 216 RKQRRSRTTFSADQLEELERAFERSQYPDVYTREELAQKTRLTEARVQT 264
>gi|291384886|ref|XP_002709113.1| PREDICTED: aristaless-like homeobox 4-like [Oryctolagus cuniculus]
Length = 397
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 26/47 (55%), Positives = 34/47 (72%)
Query: 45 NSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
N ++RR RT FTS QL+ELE F + YPD+ RE++AM T+LTEA
Sbjct: 196 NKGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEA 242
>gi|16758738|ref|NP_446321.1| paired mesoderm homeobox protein 2A [Rattus norvegicus]
gi|8134639|sp|Q62782.1|PHX2A_RAT RecName: Full=Paired mesoderm homeobox protein 2A; AltName:
Full=ARIX1 homeodomain protein; AltName: Full=Aristaless
homeobox protein homolog; AltName: Full=Paired-like
homeobox 2A
gi|1002494|gb|AAB04168.1| Arix1 homeodomain protein [Rattus norvegicus]
Length = 281
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FTS QL+ELE FA YPD+ TREE+A+ +LTEA
Sbjct: 88 RKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEA 132
>gi|432891029|ref|XP_004075513.1| PREDICTED: paired box protein Pax-3-like [Oryzias latipes]
Length = 495
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 35/89 (39%), Positives = 51/89 (57%), Gaps = 7/89 (7%)
Query: 3 ERGRILPIEPLIGNIKTELSNHNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQ 62
ER IE ++G+ ++ S+H+D D ++ + ++QRR RT FT++QL
Sbjct: 184 ERRTKHSIEGILGD-RSPKSSHSDDGSDVESE------PDLPLKRKQRRSRTTFTAEQLD 236
Query: 63 ELEATFARNRYPDMSTREEIAMWTNLTEA 91
ELE F R YPD+ TREE+A LTEA
Sbjct: 237 ELERAFERTHYPDIYTREELAQRAKLTEA 265
>gi|47209983|emb|CAF94204.1| unnamed protein product [Tetraodon nigroviridis]
Length = 296
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 36/54 (66%)
Query: 38 SNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
S+ ++QRR RT FTS QL+ELE FA YPD+ TREE+A+ +LTEA
Sbjct: 78 SDPSGINEKRKQRRIRTTFTSSQLKELERVFAETHYPDIYTREELALKIDLTEA 131
>gi|397486104|ref|XP_003814171.1| PREDICTED: cone-rod homeobox protein [Pan paniscus]
Length = 321
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/45 (53%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR+RT FT QL+ELE FA+ +YPD+ REE+A+ NL E+
Sbjct: 59 RKQRRERTTFTRSQLEELETLFAKTQYPDVYAREEVALKINLPES 103
>gi|194886957|ref|XP_001976718.1| GG19864 [Drosophila erecta]
gi|190659905|gb|EDV57118.1| GG19864 [Drosophila erecta]
Length = 453
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 35/45 (77%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT++QL+ LE F+R +YPD+ TREE+A T LTEA
Sbjct: 180 RKQRRSRTTFTAEQLEALERAFSRTQYPDVYTREELAQTTALTEA 224
>gi|148684574|gb|EDL16521.1| paired-like homeobox 2a [Mus musculus]
Length = 263
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FTS QL+ELE FA YPD+ TREE+A+ +LTEA
Sbjct: 71 RKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEA 115
>gi|444513675|gb|ELV10425.1| Paired mesoderm homeobox protein 2B [Tupaia chinensis]
Length = 236
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 42/71 (59%)
Query: 21 LSNHNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTRE 80
L +H +S + ++ ++QRR RT FTS QL+ELE FA YPD+ TRE
Sbjct: 70 LRDHQNSPYAAVPYKLFTDHGGLNEKRKQRRIRTTFTSAQLKELERVFAETHYPDIYTRE 129
Query: 81 EIAMWTNLTEA 91
E+A+ +LTEA
Sbjct: 130 ELALKIDLTEA 140
>gi|432916066|ref|XP_004079275.1| PREDICTED: paired box protein Pax-3 [Oryzias latipes]
Length = 487
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 44/78 (56%), Gaps = 6/78 (7%)
Query: 14 IGNIKTELSNHNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRY 73
I I + S+H+D D ++ ++QRR RT FT++QL+ELE F R Y
Sbjct: 191 IDGILGDRSSHSDEGSDVDSE------PGLPLKRKQRRSRTTFTAEQLEELERAFERTHY 244
Query: 74 PDMSTREEIAMWTNLTEA 91
PD+ TREE+A LTEA
Sbjct: 245 PDIYTREELAQRAKLTEA 262
>gi|149035327|gb|EDL90031.1| paired-like homeobox 2b (predicted) [Rattus norvegicus]
Length = 294
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FTS QL+ELE FA YPD+ TREE+A+ +LTEA
Sbjct: 96 RKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEA 140
>gi|46309511|ref|NP_996953.1| paired mesoderm homeobox protein 2A [Danio rerio]
gi|42542899|gb|AAH66448.1| Paired-like homeobox 2a [Danio rerio]
Length = 277
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 37/54 (68%)
Query: 38 SNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
S++ ++QRR RT FTS QL+ELE FA YPD+ TREE+A+ +LTEA
Sbjct: 78 SDASGLNEKRKQRRIRTTFTSSQLKELERVFAETHYPDIYTREELALKIDLTEA 131
>gi|410909774|ref|XP_003968365.1| PREDICTED: paired mesoderm homeobox protein 2A-like [Takifugu
rubripes]
Length = 299
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FTS QL+ELE FA YPD+ TREE+A+ +LTEA
Sbjct: 90 RKQRRIRTTFTSSQLKELERVFAETHYPDIYTREELALKIDLTEA 134
>gi|124111297|gb|ABM92047.1| PAX7 [Pan troglodytes]
Length = 54
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT++QL+ELE F R YPD+ TREE+A T LTEA
Sbjct: 7 RKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEA 51
>gi|14017793|dbj|BAB47417.1| KIAA1788 protein [Homo sapiens]
Length = 413
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 29/66 (43%), Positives = 42/66 (63%), Gaps = 3/66 (4%)
Query: 29 EDSSAKDSSS---NSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMW 85
+D ++ D S + + N ++RR RT FTS QL+ELE F + YPD+ RE++AM
Sbjct: 193 QDRASSDLPSPLEKADSESNKGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMR 252
Query: 86 TNLTEA 91
T+LTEA
Sbjct: 253 TDLTEA 258
>gi|391340589|ref|XP_003744622.1| PREDICTED: retinal homeobox protein Rx3-like [Metaseiulus
occidentalis]
Length = 301
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 35/45 (77%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FTS QL+ELE F+R YPD+ TREE+A+ +LTEA
Sbjct: 73 RKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAVRVDLTEA 117
>gi|340724544|ref|XP_003400641.1| PREDICTED: LOW QUALITY PROTEIN: segmentation protein paired-like
[Bombus terrestris]
Length = 502
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 33/45 (73%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT+ QL ELE F R +YPD+ TREE+A T LTEA
Sbjct: 189 RKQRRSRTTFTAHQLDELERAFERTQYPDIYTREELAQRTKLTEA 233
>gi|114559041|ref|XP_524801.2| PREDICTED: ALX homeobox 3 [Pan troglodytes]
Length = 343
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/48 (50%), Positives = 35/48 (72%)
Query: 44 KNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
KN ++RR RT F++ QL+ELE F + YPD+ RE++A+ T+LTEA
Sbjct: 148 KNKSKKRRNRTTFSTFQLEELEKVFQKTHYPDVYAREQLALRTDLTEA 195
>gi|195431545|ref|XP_002063797.1| GK15860 [Drosophila willistoni]
gi|194159882|gb|EDW74783.1| GK15860 [Drosophila willistoni]
Length = 692
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 38/64 (59%)
Query: 28 IEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTN 87
+ED K ++ + + +QRR RT FTS QL ELE F YPD+ TREEIA +
Sbjct: 565 MEDFHLKSYGDDASSLADKSKQRRIRTTFTSNQLNELEKIFLETHYPDIYTREEIASKLH 624
Query: 88 LTEA 91
LTEA
Sbjct: 625 LTEA 628
>gi|348523389|ref|XP_003449206.1| PREDICTED: ALX homeobox protein 1-like isoform 2 [Oreochromis
niloticus]
Length = 318
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 44/77 (57%), Gaps = 12/77 (15%)
Query: 15 GNIKTELSNHNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYP 74
G+ KT+L + D + N +SK+ RR RT FTS QL+ELE F + YP
Sbjct: 97 GSEKTDLDDMGDKCD-----------SNVSSSKK-RRHRTTFTSAQLEELEKVFQKTHYP 144
Query: 75 DMSTREEIAMWTNLTEA 91
D+ RE++AM T LTEA
Sbjct: 145 DVYVREQLAMRTELTEA 161
>gi|109013372|ref|XP_001099295.1| PREDICTED: ALX homeobox 3 [Macaca mulatta]
Length = 343
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 25/55 (45%), Positives = 38/55 (69%)
Query: 37 SSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
S + + KN ++RR RT F++ QL+ELE F + YPD+ RE++A+ T+LTEA
Sbjct: 141 SDSMELAKNKSKKRRNRTTFSTFQLEELEKVFQKTHYPDVYAREQLALRTDLTEA 195
>gi|357621094|gb|EHJ73052.1| hypothetical protein KGM_05078 [Danaus plexippus]
Length = 165
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 52/97 (53%), Gaps = 6/97 (6%)
Query: 1 MLERGRILPIEPLIGNIKTE----LSNHNDSIEDSSAKDSSSNSKNTKN--SKRQRRQRT 54
M++ ILP E +K E ++ ++ S + ++ T + + +RR RT
Sbjct: 1 MVQTLGILPAEGAFKKLKPEPGGAVTGGTSALSPSLGPQHAGHTPTTASCPTPARRRHRT 60
Query: 55 HFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
FT +QL ELEA FA++ YPD+ REE+A T L EA
Sbjct: 61 TFTQEQLAELEAAFAKSHYPDIYCREELARTTKLNEA 97
>gi|350397864|ref|XP_003485014.1| PREDICTED: LOW QUALITY PROTEIN: protein gooseberry-like [Bombus
impatiens]
Length = 522
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 33/45 (73%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT+ QL ELE F R +YPD+ TREE+A T LTEA
Sbjct: 212 RKQRRSRTTFTAHQLDELERAFERTQYPDIYTREELAQRTKLTEA 256
>gi|432918406|ref|XP_004079609.1| PREDICTED: ALX homeobox protein 1-like [Oryzias latipes]
Length = 326
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 38/63 (60%)
Query: 29 EDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNL 88
E S D + +S ++RR RT FTS QL+ELE F + YPD+ RE++AM T L
Sbjct: 104 EKSELDDMGDKCDSNVSSSKKRRHRTTFTSAQLEELEKVFQKTHYPDVYVREQLAMRTEL 163
Query: 89 TEA 91
TEA
Sbjct: 164 TEA 166
>gi|332237569|ref|XP_003267978.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein aristaless-like 3
[Nomascus leucogenys]
Length = 343
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/48 (50%), Positives = 35/48 (72%)
Query: 44 KNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
KN ++RR RT F++ QL+ELE F + YPD+ RE++A+ T+LTEA
Sbjct: 148 KNKSKKRRNRTTFSTFQLEELEKVFQKTHYPDVYAREQLALRTDLTEA 195
>gi|242014875|ref|XP_002428108.1| Homeobox protein OTX1, putative [Pediculus humanus corporis]
gi|212512639|gb|EEB15370.1| Homeobox protein OTX1, putative [Pediculus humanus corporis]
Length = 291
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 34/47 (72%)
Query: 45 NSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
N ++QRR+RT FT QL LEA FA+ RYPD+ REE+A+ NL E+
Sbjct: 33 NPRKQRRERTTFTRAQLDVLEALFAKTRYPDIFMREEVALKINLPES 79
>gi|45383792|ref|NP_989493.1| homeobox protein aristaless-like 4 [Gallus gallus]
gi|3661601|gb|AAC61772.1| paired type homeodomain protein [Gallus gallus]
Length = 387
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 29/66 (43%), Positives = 42/66 (63%), Gaps = 3/66 (4%)
Query: 29 EDSSAKDSSS---NSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMW 85
+D ++ D S + + N ++RR RT FTS QL+ELE F + YPD+ RE++AM
Sbjct: 169 QDRASTDLPSPMDKADSESNKGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMR 228
Query: 86 TNLTEA 91
T+LTEA
Sbjct: 229 TDLTEA 234
>gi|410957796|ref|XP_003985510.1| PREDICTED: paired mesoderm homeobox protein 2B [Felis catus]
Length = 232
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FTS QL+ELE FA YPD+ TREE+A+ +LTEA
Sbjct: 96 RKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEA 140
>gi|348523387|ref|XP_003449205.1| PREDICTED: ALX homeobox protein 1-like isoform 1 [Oreochromis
niloticus]
Length = 323
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 44/77 (57%), Gaps = 12/77 (15%)
Query: 15 GNIKTELSNHNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYP 74
G+ KT+L + D + N +SK+ RR RT FTS QL+ELE F + YP
Sbjct: 102 GSEKTDLDDMGDKCD-----------SNVSSSKK-RRHRTTFTSAQLEELEKVFQKTHYP 149
Query: 75 DMSTREEIAMWTNLTEA 91
D+ RE++AM T LTEA
Sbjct: 150 DVYVREQLAMRTELTEA 166
>gi|402591778|gb|EJW85707.1| hypothetical protein WUBG_03381 [Wuchereria bancrofti]
Length = 143
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 39/65 (60%)
Query: 27 SIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWT 86
I+ SS + N ++QRR RT FTS QL+ELE F YPD+ TRE++AM
Sbjct: 11 GIQGSSLVGAICGRNNPMERRKQRRIRTTFTSGQLKELERAFLETHYPDIYTREDLAMRI 70
Query: 87 NLTEA 91
+LTEA
Sbjct: 71 DLTEA 75
>gi|301787271|ref|XP_002929051.1| PREDICTED: homeobox protein aristaless-like 4-like [Ailuropoda
melanoleuca]
Length = 353
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 29/66 (43%), Positives = 42/66 (63%), Gaps = 3/66 (4%)
Query: 29 EDSSAKDSSS---NSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMW 85
+D ++ D S + + N ++RR RT FTS QL+ELE F + YPD+ RE++AM
Sbjct: 133 QDRASADLPSPLEKADSESNKGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMR 192
Query: 86 TNLTEA 91
T+LTEA
Sbjct: 193 TDLTEA 198
>gi|301772146|ref|XP_002921493.1| PREDICTED: paired mesoderm homeobox protein 2B-like, partial
[Ailuropoda melanoleuca]
gi|281351965|gb|EFB27549.1| hypothetical protein PANDA_010383 [Ailuropoda melanoleuca]
Length = 193
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FTS QL+ELE FA YPD+ TREE+A+ +LTEA
Sbjct: 96 RKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEA 140
>gi|11932960|emb|CAC19336.1| homeobox transcription factor [Platynereis dumerilii]
Length = 279
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/44 (59%), Positives = 33/44 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTE 90
KR+RR RT FT +QL+ LEATFA+ YPD+ REE+AM +L E
Sbjct: 100 KRKRRHRTIFTEEQLEALEATFAKTHYPDVMLREELAMKVDLKE 143
>gi|397489578|ref|XP_003815802.1| PREDICTED: LOW QUALITY PROTEIN: paired mesoderm homeobox protein 2A
[Pan paniscus]
Length = 221
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 3/86 (3%)
Query: 9 PIEPLIGNIKTELS---NHNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELE 65
P P +G+ L +H + + ++QRR RT FTS QL+ELE
Sbjct: 40 PPCPALGSSNCALGALRDHQPAPYSAVPYKFFPEPSGLHEKRKQRRIRTTFTSAQLKELE 99
Query: 66 ATFARNRYPDMSTREEIAMWTNLTEA 91
FA YPD+ TREE+A+ +LTEA
Sbjct: 100 RVFAETHYPDIYTREELALKIDLTEA 125
>gi|327387652|gb|AEA72424.1| paired-box 3 [Solea senegalensis]
Length = 221
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 33/45 (73%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT++QL+ELE F R YPD+ TREE+A LTEA
Sbjct: 174 RKQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEA 218
>gi|431898078|gb|ELK06781.1| Paired mesoderm homeobox protein 2A [Pteropus alecto]
Length = 284
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FTS QL+ELE FA YPD+ TREE+A+ +LTEA
Sbjct: 88 RKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEA 132
>gi|18859207|ref|NP_571352.1| paired box protein Pax-3 [Danio rerio]
gi|2909765|gb|AAC41253.1| transcription factor PAX3 [Danio rerio]
Length = 509
Score = 57.0 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/45 (57%), Positives = 33/45 (73%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT++QL+ELE F R YPD+ TREE+A LTEA
Sbjct: 218 RKQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEA 262
>gi|355002403|gb|AER51826.1| cone-rod homeobox, partial [Rhinolophus pusillus]
Length = 278
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR+RT FT QL+ELEA F + +YPD+ REE+A+ NL E+
Sbjct: 29 RKQRRERTTFTRSQLEELEALFTKTQYPDVYAREEVALKINLPES 73
>gi|328802691|ref|NP_001179086.1| paired mesoderm homeobox protein 2A [Bos taurus]
gi|296479851|tpg|DAA21966.1| TPA: paired-like homeobox 2a-like [Bos taurus]
Length = 284
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FTS QL+ELE FA YPD+ TREE+A+ +LTEA
Sbjct: 88 RKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEA 132
>gi|73988195|ref|XP_542326.2| PREDICTED: paired mesoderm homeobox protein 2A [Canis lupus
familiaris]
Length = 284
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FTS QL+ELE FA YPD+ TREE+A+ +LTEA
Sbjct: 88 RKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEA 132
>gi|1840411|dbj|BAA12289.1| Pax-37 [Halocynthia roretzi]
Length = 704
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 51/83 (61%), Gaps = 2/83 (2%)
Query: 11 EPLIGNIKTELSNHNDSIE-DSSAKDSSSNSKNTKNSKR-QRRQRTHFTSQQLQELEATF 68
+P GN ++ S++ + E ++ DS +S+ KR QRR RT F++ QL+ELE F
Sbjct: 153 DPENGNTNSDTSSNGATGEREADEGDSDCDSEPELPLKRKQRRSRTTFSADQLEELERCF 212
Query: 69 ARNRYPDMSTREEIAMWTNLTEA 91
R YPD+ TREE+A T LTEA
Sbjct: 213 ERTHYPDIYTREELAQRTRLTEA 235
>gi|335294428|ref|XP_003357226.1| PREDICTED: paired mesoderm homeobox protein 2A-like [Sus scrofa]
Length = 286
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FTS QL+ELE FA YPD+ TREE+A+ +LTEA
Sbjct: 88 RKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEA 132
>gi|149719311|ref|XP_001499207.1| PREDICTED: paired mesoderm homeobox protein 2A-like [Equus
caballus]
Length = 284
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FTS QL+ELE FA YPD+ TREE+A+ +LTEA
Sbjct: 88 RKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEA 132
>gi|402855587|ref|XP_003892401.1| PREDICTED: homeobox protein aristaless-like 3 [Papio anubis]
Length = 343
Score = 57.0 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 24/48 (50%), Positives = 35/48 (72%)
Query: 44 KNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
KN ++RR RT F++ QL+ELE F + YPD+ RE++A+ T+LTEA
Sbjct: 148 KNKSKKRRNRTTFSTFQLEELEKVFQKTHYPDVYAREQLALRTDLTEA 195
>gi|13774326|gb|AAK38835.1| aristaless-like homeobox 4 [Homo sapiens]
Length = 411
Score = 57.0 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 29/66 (43%), Positives = 42/66 (63%), Gaps = 3/66 (4%)
Query: 29 EDSSAKDSSS---NSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMW 85
+D ++ D S + + N ++RR RT FTS QL+ELE F + YPD+ RE++AM
Sbjct: 191 QDRASSDLPSPLEKADSESNKGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMR 250
Query: 86 TNLTEA 91
T+LTEA
Sbjct: 251 TDLTEA 256
>gi|72124445|ref|XP_787382.1| PREDICTED: paired mesoderm homeobox protein 1-like
[Strongylocentrotus purpuratus]
Length = 327
Score = 57.0 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 31/64 (48%), Positives = 37/64 (57%)
Query: 28 IEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTN 87
++D S S N + SKRQRR RT FT+ QL LE F R YPD REE+A +
Sbjct: 145 LDDGSCGSLSDNGIISAKSKRQRRNRTTFTTAQLDALEKVFERTHYPDAFLREELAKKVD 204
Query: 88 LTEA 91
LTEA
Sbjct: 205 LTEA 208
>gi|11125350|emb|CAC15060.1| homeodomain transcription factor ALX4 [Homo sapiens]
Length = 411
Score = 57.0 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 29/66 (43%), Positives = 42/66 (63%), Gaps = 3/66 (4%)
Query: 29 EDSSAKDSSS---NSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMW 85
+D ++ D S + + N ++RR RT FTS QL+ELE F + YPD+ RE++AM
Sbjct: 191 QDRASSDLPSPLEKADSESNKGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMR 250
Query: 86 TNLTEA 91
T+LTEA
Sbjct: 251 TDLTEA 256
>gi|47224832|emb|CAG06402.1| unnamed protein product [Tetraodon nigroviridis]
Length = 523
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 33/45 (73%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT++QL+ELE F R YPD+ TREE+A LTEA
Sbjct: 258 RKQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEA 302
>gi|242014879|ref|XP_002428110.1| Homeobox protein EgHBX4, putative [Pediculus humanus corporis]
gi|212512641|gb|EEB15372.1| Homeobox protein EgHBX4, putative [Pediculus humanus corporis]
Length = 83
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 35/47 (74%)
Query: 45 NSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
N+++QRR+RT F+ QQL LE FA+ RYPD+ REE+A+ NL E+
Sbjct: 6 NARKQRRERTTFSRQQLDVLETLFAKTRYPDIFMREEVALKINLPES 52
>gi|27807477|ref|NP_777192.1| visual system homeobox 1 [Bos taurus]
gi|25009569|sp|Q9GMA3.1|VSX1_BOVIN RecName: Full=Visual system homeobox 1; AltName: Full=Homeodomain
protein RINX; AltName: Full=Retinal inner nuclear layer
homeobox protein; AltName: Full=Transcription factor
VSX1
gi|9802261|gb|AAF99655.1|AF251032_1 homeodomain protein RINX [Bos taurus]
gi|296481350|tpg|DAA23465.1| TPA: visual system homeobox 1 [Bos taurus]
Length = 365
Score = 57.0 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 31/65 (47%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 27 SIEDSSAKDSSSNSKNTKNSKRQ-RRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMW 85
S EDS ++D S + SKR+ RR RT FT+ QL+ELE F+ YPD+ RE +AM
Sbjct: 141 SDEDSPSEDRSDRKASPAPSKRKKRRHRTVFTAHQLEELEKAFSEAHYPDVYAREMLAMK 200
Query: 86 TNLTE 90
T L E
Sbjct: 201 TELPE 205
>gi|388240432|dbj|BAM15710.1| paired box gene 3 [Scyliorhinus torazame]
Length = 506
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 33/45 (73%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT++QL+ELE F R YPD+ TREE+A LTEA
Sbjct: 215 RKQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEA 259
>gi|355002377|gb|AER51813.1| cone-rod homeobox, partial [Myotis laniger]
Length = 285
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR+RT FT QL+ELEA FA+ +YPD+ REE+ + NL E+
Sbjct: 29 RKQRRERTTFTRSQLEELEALFAKTQYPDVYAREEVVLKINLPES 73
>gi|350596588|ref|XP_003361395.2| PREDICTED: paired box protein Pax-3 [Sus scrofa]
Length = 509
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 33/45 (73%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT++QL+ELE F R YPD+ TREE+A LTEA
Sbjct: 246 RKQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEA 290
>gi|194217845|ref|XP_001915219.1| PREDICTED: hypothetical protein LOC100055958 [Equus caballus]
Length = 608
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 29/66 (43%), Positives = 42/66 (63%), Gaps = 3/66 (4%)
Query: 29 EDSSAKDSSS---NSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMW 85
+D ++ D S + + N ++RR RT FTS QL+ELE F + YPD+ RE++AM
Sbjct: 388 QDRASADLPSPLEKADSESNKGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMR 447
Query: 86 TNLTEA 91
T+LTEA
Sbjct: 448 TDLTEA 453
>gi|126332676|ref|XP_001368029.1| PREDICTED: homeobox protein aristaless-like 4-like [Monodelphis
domestica]
Length = 417
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/47 (55%), Positives = 34/47 (72%)
Query: 45 NSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
N ++RR RT FTS QL+ELE F + YPD+ RE++AM T+LTEA
Sbjct: 217 NKGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEA 263
>gi|224049967|ref|XP_002188708.1| PREDICTED: paired mesoderm homeobox protein 2B [Taeniopygia
guttata]
Length = 187
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FTS QL+ELE FA YPD+ TREE+A+ +LTEA
Sbjct: 96 RKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEA 140
>gi|119588472|gb|EAW68066.1| aristaless-like homeobox 4 [Homo sapiens]
Length = 411
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 29/66 (43%), Positives = 42/66 (63%), Gaps = 3/66 (4%)
Query: 29 EDSSAKDSSS---NSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMW 85
+D ++ D S + + N ++RR RT FTS QL+ELE F + YPD+ RE++AM
Sbjct: 191 QDRASSDLPSPLEKADSESNKGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMR 250
Query: 86 TNLTEA 91
T+LTEA
Sbjct: 251 TDLTEA 256
>gi|55743092|ref|NP_068745.2| homeobox protein aristaless-like 4 [Homo sapiens]
gi|254763249|sp|Q9H161.2|ALX4_HUMAN RecName: Full=Homeobox protein aristaless-like 4
gi|11125719|emb|CAC15120.1| homeodomain transcription factor ALX4 [Homo sapiens]
gi|168278961|dbj|BAG11360.1| aristaless-like homeobox 4 [synthetic construct]
gi|187252473|gb|AAI66622.1| ALX homeobox 4 [synthetic construct]
Length = 411
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 29/66 (43%), Positives = 42/66 (63%), Gaps = 3/66 (4%)
Query: 29 EDSSAKDSSS---NSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMW 85
+D ++ D S + + N ++RR RT FTS QL+ELE F + YPD+ RE++AM
Sbjct: 191 QDRASSDLPSPLEKADSESNKGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMR 250
Query: 86 TNLTEA 91
T+LTEA
Sbjct: 251 TDLTEA 256
>gi|351696938|gb|EHA99856.1| Homeobox protein aristaless-like 4, partial [Heterocephalus glaber]
Length = 300
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 34/47 (72%)
Query: 45 NSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
N ++RR RT FTS QL+ELE F + YPD+ RE++AM T+LTEA
Sbjct: 98 NKGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEA 144
>gi|332210907|ref|XP_003254555.1| PREDICTED: paired mesoderm homeobox protein 2A [Nomascus
leucogenys]
Length = 287
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FTS QL+ELE FA YPD+ TREE+A+ +LTEA
Sbjct: 91 RKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEA 135
>gi|426369665|ref|XP_004051805.1| PREDICTED: paired mesoderm homeobox protein 2A [Gorilla gorilla
gorilla]
Length = 342
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FTS QL+ELE FA YPD+ TREE+A+ +LTEA
Sbjct: 146 RKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEA 190
>gi|327267059|ref|XP_003218320.1| PREDICTED: paired box protein Pax-3-like isoform 4 [Anolis
carolinensis]
Length = 461
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 33/45 (73%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT++QL+ELE F R YPD+ TREE+A LTEA
Sbjct: 194 RKQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEA 238
>gi|410989121|ref|XP_004000813.1| PREDICTED: homeobox protein ESX1 [Felis catus]
Length = 255
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 33/45 (73%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT QLQELE F R +YPD+ TREEIA NLTEA
Sbjct: 102 RKQRRYRTAFTQLQLQELEDIFHRVQYPDVFTREEIAGRLNLTEA 146
>gi|410972832|ref|XP_003992860.1| PREDICTED: paired mesoderm homeobox protein 2A, partial [Felis
catus]
Length = 273
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FTS QL+ELE FA YPD+ TREE+A+ +LTEA
Sbjct: 77 RKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEA 121
>gi|348587018|ref|XP_003479265.1| PREDICTED: homeobox protein aristaless-like 3-like [Cavia
porcellus]
Length = 343
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 24/48 (50%), Positives = 35/48 (72%)
Query: 44 KNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
KN ++RR RT F++ QL+ELE F + YPD+ RE++A+ T+LTEA
Sbjct: 148 KNKSKKRRNRTTFSTFQLEELEKVFQKTHYPDVYAREQLALRTDLTEA 195
>gi|311257828|ref|XP_003127313.1| PREDICTED: cone-rod homeobox protein-like [Sus scrofa]
Length = 299
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 35/45 (77%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR+RT FT QL+ELE+ FA+ +YPD+ REE+A+ NL E+
Sbjct: 37 RKQRRERTTFTRSQLEELESLFAKTQYPDVYAREEVALKINLPES 81
>gi|10863749|gb|AAG23961.1|AF294629_1 aristaless-like 4 [Homo sapiens]
Length = 410
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 29/66 (43%), Positives = 42/66 (63%), Gaps = 3/66 (4%)
Query: 29 EDSSAKDSSS---NSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMW 85
+D ++ D S + + N ++RR RT FTS QL+ELE F + YPD+ RE++AM
Sbjct: 191 QDRASSDLPSPLEKADSESNKGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMR 250
Query: 86 TNLTEA 91
T+LTEA
Sbjct: 251 TDLTEA 256
>gi|327267055|ref|XP_003218318.1| PREDICTED: paired box protein Pax-3-like isoform 2 [Anolis
carolinensis]
Length = 461
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 33/45 (73%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT++QL+ELE F R YPD+ TREE+A LTEA
Sbjct: 194 RKQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEA 238
>gi|395823365|ref|XP_003784957.1| PREDICTED: paired box protein Pax-3 [Otolemur garnettii]
Length = 483
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 33/45 (73%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT++QL+ELE F R YPD+ TREE+A LTEA
Sbjct: 216 RKQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEA 260
>gi|351698176|gb|EHB01095.1| Paired box protein Pax-3 [Heterocephalus glaber]
Length = 670
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 33/45 (73%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT++QL+ELE F R YPD+ TREE+A LTEA
Sbjct: 296 RKQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEA 340
>gi|328718058|ref|XP_003246373.1| PREDICTED: retinal homeobox protein Rx-B-like isoform 1
[Acyrthosiphon pisum]
gi|328718060|ref|XP_003246374.1| PREDICTED: retinal homeobox protein Rx-B-like isoform 2
[Acyrthosiphon pisum]
gi|328718062|ref|XP_003246375.1| PREDICTED: retinal homeobox protein Rx-B-like isoform 3
[Acyrthosiphon pisum]
gi|328718064|ref|XP_003246376.1| PREDICTED: retinal homeobox protein Rx-B-like isoform 4
[Acyrthosiphon pisum]
Length = 218
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 45/70 (64%)
Query: 22 SNHNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREE 81
S+ D + SS S+ + N+ ++QRR RT FT+ QL+ELE +F + YPD+ REE
Sbjct: 48 SDRCDDNDQSSGSLSTDQNSNSNVKRKQRRYRTTFTNFQLEELENSFQKTHYPDVFFREE 107
Query: 82 IAMWTNLTEA 91
+AM +LTEA
Sbjct: 108 LAMRIDLTEA 117
>gi|281340522|gb|EFB16106.1| hypothetical protein PANDA_016951 [Ailuropoda melanoleuca]
Length = 172
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 3/86 (3%)
Query: 9 PIEPLIGNIKTELS---NHNDSIEDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELE 65
P P +G+ L +H + + ++QRR RT FTS QL+ELE
Sbjct: 34 PPCPALGSSNCALGALRDHQPAPYSAVPYKFFPEPSGLHEKRKQRRIRTTFTSAQLKELE 93
Query: 66 ATFARNRYPDMSTREEIAMWTNLTEA 91
FA YPD+ TREE+A+ +LTEA
Sbjct: 94 RVFAETHYPDIYTREELALKIDLTEA 119
>gi|254281208|ref|NP_001006776.2| paired box protein Pax-3 [Xenopus (Silurana) tropicalis]
gi|224493169|sp|Q28DP6.2|PAX3_XENTR RecName: Full=Paired box protein Pax-3; AltName: Full=Paired-domain
transcription factor Pax3
Length = 461
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 33/45 (73%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT++QL+ELE F R YPD+ TREE+A LTEA
Sbjct: 194 RKQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEA 238
>gi|54289376|gb|AAV31938.1| paired-box 3 [Xenopus laevis]
Length = 459
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 33/45 (73%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT++QL+ELE F R YPD+ TREE+A LTEA
Sbjct: 193 RKQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEA 237
>gi|301779609|ref|XP_002925222.1| PREDICTED: paired box protein Pax-3-like [Ailuropoda melanoleuca]
Length = 483
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 33/45 (73%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT++QL+ELE F R YPD+ TREE+A LTEA
Sbjct: 216 RKQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEA 260
>gi|114107892|gb|AAI23264.1| LOC496377 protein [Xenopus laevis]
Length = 268
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 33/45 (73%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT++QL+ELE F R YPD+ TREE+A LTEA
Sbjct: 217 RKQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEA 261
>gi|449266925|gb|EMC77903.1| Paired box protein Pax-3, partial [Columba livia]
Length = 459
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 33/45 (73%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT++QL+ELE F R YPD+ TREE+A LTEA
Sbjct: 192 RKQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEA 236
>gi|54289374|gb|AAV31937.1| paired-box 3 [Xenopus laevis]
Length = 460
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 33/45 (73%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT++QL+ELE F R YPD+ TREE+A LTEA
Sbjct: 194 RKQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEA 238
>gi|348539021|ref|XP_003456988.1| PREDICTED: paired box protein Pax-3-like [Oreochromis niloticus]
Length = 554
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 33/45 (73%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT++QL+ELE F R YPD+ TREE+A LTEA
Sbjct: 218 RKQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEA 262
>gi|344296919|ref|XP_003420149.1| PREDICTED: LOW QUALITY PROTEIN: paired mesoderm homeobox protein
2A-like [Loxodonta africana]
Length = 262
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FTS QL+ELE FA YPD+ TREE+A+ +LTEA
Sbjct: 67 RKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEA 111
>gi|124054606|gb|ABM89504.1| Phox2b [Scyliorhinus canicula]
Length = 230
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FTS QL+ELE FA YPD+ TREE+A+ +LTEA
Sbjct: 59 RKQRRIRTTFTSSQLKELERVFAETHYPDIYTREELALKIDLTEA 103
>gi|89272731|emb|CAJ82363.1| paired box protein 3 [Xenopus (Silurana) tropicalis]
Length = 462
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 33/45 (73%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT++QL+ELE F R YPD+ TREE+A LTEA
Sbjct: 195 RKQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEA 239
>gi|188219638|ref|NP_001120838.1| paired box protein Pax-3 isoform PAX3i [Homo sapiens]
gi|397495768|ref|XP_003818718.1| PREDICTED: paired box protein Pax-3 isoform 1 [Pan paniscus]
gi|72533358|gb|AAI01300.1| Paired box 3 [Homo sapiens]
gi|72533360|gb|AAI01303.1| Paired box 3 [Homo sapiens]
gi|72533551|gb|AAI01301.1| Paired box 3 [Homo sapiens]
gi|89130716|gb|AAI14364.1| Paired box 3 [Homo sapiens]
Length = 483
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 33/45 (73%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT++QL+ELE F R YPD+ TREE+A LTEA
Sbjct: 216 RKQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEA 260
>gi|410908673|ref|XP_003967815.1| PREDICTED: ALX homeobox protein 1-like [Takifugu rubripes]
Length = 320
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/63 (44%), Positives = 38/63 (60%)
Query: 29 EDSSAKDSSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNL 88
E D + + +S ++RR RT FTS QL+ELE F + YPD+ RE++AM T L
Sbjct: 99 EKPDLDDMTDKCDSNVSSSKKRRHRTTFTSAQLEELEKVFQKTHYPDVYVREQLAMRTEL 158
Query: 89 TEA 91
TEA
Sbjct: 159 TEA 161
>gi|345797572|ref|XP_545664.3| PREDICTED: paired box protein Pax-3 [Canis lupus familiaris]
Length = 482
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 33/45 (73%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT++QL+ELE F R YPD+ TREE+A LTEA
Sbjct: 215 RKQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEA 259
>gi|338725617|ref|XP_001495022.3| PREDICTED: paired box protein Pax-3 isoform 1 [Equus caballus]
Length = 483
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 33/45 (73%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++QRR RT FT++QL+ELE F R YPD+ TREE+A LTEA
Sbjct: 216 RKQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEA 260
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.311 0.124 0.338
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,451,159,299
Number of Sequences: 23463169
Number of extensions: 44803840
Number of successful extensions: 300777
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 7986
Number of HSP's successfully gapped in prelim test: 790
Number of HSP's that attempted gapping in prelim test: 291936
Number of HSP's gapped (non-prelim): 9335
length of query: 104
length of database: 8,064,228,071
effective HSP length: 73
effective length of query: 31
effective length of database: 6,351,416,734
effective search space: 196893918754
effective search space used: 196893918754
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 69 (31.2 bits)