RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy15887
(104 letters)
>d1pufa_ a.4.1.1 (A:) Homeobox protein hox-a9 {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 77
Score = 55.2 bits (133), Expect = 3e-12
Identities = 18/55 (32%), Positives = 28/55 (50%)
Query: 37 SSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++ + N +++ R++R +T Q ELE F N Y R E+A NLTE
Sbjct: 1 NNPAANWLHARSTRKKRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLLNLTER 55
>d2cufa1 a.4.1.1 (A:8-89) Homeobox-containing protein 1, HMBOX1
(Flj21616) {Human (Homo sapiens) [TaxId: 9606]}
Length = 82
Score = 52.7 bits (126), Expect = 3e-11
Identities = 15/44 (34%), Positives = 21/44 (47%)
Query: 50 RRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEALR 93
R R + + L +E+ F N+YPD + REEIA N
Sbjct: 1 RGSRFTWRKECLAVMESYFNENQYPDEAKREEIANACNAVIQKP 44
>d2cuea1 a.4.1.1 (A:7-74) Paired box protein pax6 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 68
Score = 50.6 bits (121), Expect = 1e-10
Identities = 19/42 (45%), Positives = 26/42 (61%)
Query: 50 RRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
+R RT FT +Q++ LE F R YPD+ RE +A +L EA
Sbjct: 2 QRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEA 43
>d2craa1 a.4.1.1 (A:7-64) Homeobox protein hox-b13 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 58
Score = 49.5 bits (118), Expect = 2e-10
Identities = 14/42 (33%), Positives = 26/42 (61%)
Query: 50 RRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
R++R ++ QL+ELE +A N++ R +I+ T+L+E
Sbjct: 2 RKKRIPYSKGQLRELEREYAANKFITKDKRRKISAATSLSER 43
>d2e1oa1 a.4.1.1 (A:8-64) Homeobox protein prh {Human (Homo
sapiens) [TaxId: 9606]}
Length = 57
Score = 49.4 bits (118), Expect = 2e-10
Identities = 11/42 (26%), Positives = 19/42 (45%)
Query: 50 RRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
+ + F++ Q ELE F +Y R+ +A L+E
Sbjct: 1 KGGQVRFSNDQTIELEKKFETQKYLSPPERKRLAKMLQLSER 42
>d1fjla_ a.4.1.1 (A:) Paired protein {Fruit fly (Drosophila
melanogaster) [TaxId: 7227]}
Length = 65
Score = 48.8 bits (116), Expect = 7e-10
Identities = 26/43 (60%), Positives = 32/43 (74%)
Query: 48 RQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTE 90
+QRR RT F++ QL ELE F R +YPD+ TREE+A TNLTE
Sbjct: 1 KQRRSRTTFSASQLDELERAFERTQYPDIYTREELAQRTNLTE 43
>d1yz8p1 a.4.1.1 (P:1-60) Pituitary homeobox 2 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 60
Score = 47.6 bits (113), Expect = 2e-09
Identities = 38/41 (92%), Positives = 40/41 (97%)
Query: 49 QRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLT 89
QRRQRTHFTSQQLQ+LEATF RNRYPDMSTREEIA+WTNLT
Sbjct: 1 QRRQRTHFTSQQLQQLEATFQRNRYPDMSTREEIAVWTNLT 41
>d1b72a_ a.4.1.1 (A:) Homeobox protein hox-b1 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 88
Score = 48.1 bits (114), Expect = 2e-09
Identities = 18/56 (32%), Positives = 25/56 (44%)
Query: 36 SSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
+ + RT+FT++QL ELE F N+Y + R EIA L E
Sbjct: 14 PKTAKVSEPGLGSPSGLRTNFTTRQLTELEKEFHFNKYLSRARRVEIAATLELNET 69
>d9anta_ a.4.1.1 (A:) Antennapedia Homeodomain {Drosophila
melanogaster [TaxId: 7227]}
Length = 56
Score = 47.1 bits (112), Expect = 2e-09
Identities = 17/39 (43%), Positives = 19/39 (48%)
Query: 53 RTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
R +T Q ELE F NRY R EIA +LTE
Sbjct: 1 RQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALSLTER 39
>d1p7ia_ a.4.1.1 (A:) Engrailed Homeodomain {Drosophila
melanogaster [TaxId: 7227]}
Length = 53
Score = 46.4 bits (110), Expect = 4e-09
Identities = 16/41 (39%), Positives = 23/41 (56%)
Query: 51 RQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
R RT F+S+QL L+ F NRY R++++ L EA
Sbjct: 1 RPRTAFSSEQLARLKREFNENRYLTERRRQQLSSELGLNEA 41
>d1bw5a_ a.4.1.1 (A:) Insulin gene enhancer protein isl-1 {Rat
(Rattus norvegicus) [TaxId: 10116]}
Length = 66
Score = 46.0 bits (109), Expect = 8e-09
Identities = 13/44 (29%), Positives = 20/44 (45%)
Query: 48 RQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
+ R RT +QL L +A N PD +E++ T L+
Sbjct: 2 KTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPR 45
>d1s7ea1 a.4.1.1 (A:103-152) Hepatocyte nuclear factor 6 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 50
Score = 45.2 bits (107), Expect = 1e-08
Identities = 11/39 (28%), Positives = 16/39 (41%)
Query: 53 RTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
R FT Q + L A F N+ P + I+ L +
Sbjct: 2 RLVFTDVQRRTLHAIFKENKRPSKELQITISQQLGLELS 40
>d1vnda_ a.4.1.1 (A:) VND/NK-2 protein {Fruit fly (Drosophila
melanogaster) [TaxId: 7227]}
Length = 77
Score = 45.4 bits (107), Expect = 2e-08
Identities = 16/50 (32%), Positives = 23/50 (46%)
Query: 47 KRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEALRETH 96
++R++R FT Q ELE F + RY RE +A LT +
Sbjct: 7 NKKRKRRVLFTKAQTYELERRFRQQRYLSAPEREHLASLIRLTPTQVKIW 56
>d1ig7a_ a.4.1.1 (A:) Msx-1 homeodomain {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 58
Score = 43.8 bits (103), Expect = 5e-08
Identities = 16/42 (38%), Positives = 24/42 (57%)
Query: 50 RRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
R+ RT FT+ QL LE F + +Y ++ R E + +LTE
Sbjct: 1 RKPRTPFTTAQLLALERKFRQKQYLSIAERAEFSSSLSLTET 42
>d1jgga_ a.4.1.1 (A:) Even-skipped homeodomain {Fruit fly
(Drosophila melanogaster) [TaxId: 7227]}
Length = 57
Score = 43.4 bits (102), Expect = 6e-08
Identities = 17/41 (41%), Positives = 20/41 (48%)
Query: 51 RQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
R RT FT QL LE F + Y R E+A NL E+
Sbjct: 1 RYRTAFTRDQLGRLEKEFYKENYVSRPRRCELAAQLNLPES 41
>d1le8a_ a.4.1.1 (A:) Mating type protein A1 Homeodomain {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 53
Score = 42.9 bits (101), Expect = 8e-08
Identities = 9/39 (23%), Positives = 17/39 (43%)
Query: 53 RTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++ + Q LE F R + + +EE+A +T
Sbjct: 1 KSSISPQARAFLEQVFRRKQSLNSKEKEEVAKKCGITPL 39
>d1lfba_ a.4.1.1 (A:) Hepatocyte nuclear factor 1a (LFB1/HNF1)
{Rat (Rattus rattus) [TaxId: 10117]}
Length = 78
Score = 43.6 bits (102), Expect = 1e-07
Identities = 9/38 (23%), Positives = 13/38 (34%)
Query: 53 RTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTE 90
R + Q L + R + P RE + N E
Sbjct: 1 RFKWGPASQQILFQAYERQKNPSKEERETLVEECNRAE 38
>d1wh7a_ a.4.1.1 (A:) ZF-HD homeobox protein At4g24660 {Thale
cress (Arabidopsis thaliana) [TaxId: 3702]}
Length = 80
Score = 43.5 bits (102), Expect = 1e-07
Identities = 14/60 (23%), Positives = 25/60 (41%), Gaps = 4/60 (6%)
Query: 36 SSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFAR----NRYPDMSTREEIAMWTNLTEA 91
SS S + + +R RT FT++Q +++ A R + D E+ T +
Sbjct: 4 GSSGSNPSSSGGTTKRFRTKFTAEQKEKMLAFAERLGWRIQKHDDVAVEQFCAETGVRRQ 63
>d1x2na1 a.4.1.1 (A:6-67) Homeobox protein pknox1 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 62
Score = 42.8 bits (101), Expect = 1e-07
Identities = 9/44 (20%), Positives = 17/44 (38%), Gaps = 3/44 (6%)
Query: 50 RRQRTHFTSQQLQELEATFA---RNRYPDMSTREEIAMWTNLTE 90
+ +R + + + YP +++IA TNLT
Sbjct: 3 KNKRGVLPKHATNVMRSWLFQHIGHPYPTEDEKKQIAAQTNLTL 46
>d1ftta_ a.4.1.1 (A:) Thyroid transcription factor 1 homeodomain
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 68
Score = 43.0 bits (101), Expect = 1e-07
Identities = 14/42 (33%), Positives = 23/42 (54%)
Query: 49 QRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTE 90
+R++R F+ Q+ ELE F + +Y RE +A +LT
Sbjct: 2 RRKRRVLFSQAQVYELERRFKQQKYLSAPEREHLASMIHLTP 43
>d1au7a1 a.4.1.1 (A:103-160) Pit-1 POU homeodomain {Rat (Rattus
norvegicus) [TaxId: 10116]}
Length = 58
Score = 42.2 bits (99), Expect = 2e-07
Identities = 9/41 (21%), Positives = 15/41 (36%)
Query: 51 RQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
++RT + LE F + P +A NL +
Sbjct: 1 KRRTTISIAAKDALERHFGEHSKPSSQEIMRMAEELNLEKE 41
>d1zq3p1 a.4.1.1 (P:2-68) Homeotic bicoid protein {Fruit fly
(Drosophila melanogaster) [TaxId: 7227]}
Length = 67
Score = 42.2 bits (99), Expect = 2e-07
Identities = 16/42 (38%), Positives = 21/42 (50%)
Query: 50 RRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
RR RT FTS Q+ ELE F + RY +++ L A
Sbjct: 2 RRTRTTFTSSQIAELEQHFLQGRYLTAPRLADLSAKLALGTA 43
>d1ocpa_ a.4.1.1 (A:) Oct-3 POU Homeodomain {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 67
Score = 41.1 bits (96), Expect = 6e-07
Identities = 10/46 (21%), Positives = 19/46 (41%)
Query: 46 SKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEA 91
+ ++R+RT ++ LE F + P + IA L +
Sbjct: 5 VQARKRKRTSIENRVRWSLETMFLKCPKPSLQQITHIANQLGLEKD 50
>d1uhsa_ a.4.1.1 (A:) Homeodomain-only protein, Hop {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 72
Score = 40.0 bits (93), Expect = 2e-06
Identities = 14/47 (29%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
Query: 50 RRQRTHFTSQQLQELEATFAR-NRYPDMSTREEIAMWTNLTEALRET 95
T Q++ LE F + N++PD +T IA LTE +
Sbjct: 2 SEGAATMTEDQVEILEYNFNKVNKHPDPTTLCLIAAEAGLTEEQTQK 48
>d1pufb_ a.4.1.1 (B:) pbx1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 73
Score = 38.8 bits (90), Expect = 6e-06
Identities = 14/45 (31%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Query: 50 RRQRTHFTSQQLQELEATFA---RNRYPDMSTREEIAMWTNLTEA 91
RR+R +F Q + L F N YP +EE+A +T +
Sbjct: 2 RRKRRNFNKQATEILNEYFYSHLSNPYPSEEAKEELAKKCGITVS 46
>d1k61a_ a.4.1.1 (A:) mat alpha2 Homeodomain {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 60
Score = 37.8 bits (88), Expect = 1e-05
Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 5/45 (11%)
Query: 50 RRQRTHFTSQQLQELEATFARNR---YPDMSTREEIAMWTNLTEA 91
R R FT + ++ LE+ FA+N Y D E + T+L+
Sbjct: 1 RGHR--FTKENVRILESWFAKNIENPYLDTKGLENLMKNTSLSRI 43
>d1e3oc1 a.4.1.1 (C:104-160) Oct-1 POU Homeodomain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 57
Score = 37.6 bits (87), Expect = 1e-05
Identities = 10/45 (22%), Positives = 17/45 (37%)
Query: 52 QRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEALRETH 96
+RT + LE +F N+ P IA N+ + +
Sbjct: 1 KRTSIETNIRVALEKSFMENQKPTSEDITLIAEQLNMEKEVIRVW 45
>d1x2ma1 a.4.1.1 (A:8-59) Lag1 longevity assurance homolog 6,
LASS6 {Mouse (Mus musculus) [TaxId: 10090]}
Length = 52
Score = 37.4 bits (87), Expect = 1e-05
Identities = 8/36 (22%), Positives = 14/36 (38%), Gaps = 1/36 (2%)
Query: 57 TSQQLQELEATFAR-NRYPDMSTREEIAMWTNLTEA 91
T+Q LE F ++PD E ++ +
Sbjct: 1 TAQPNAILEKVFTAITKHPDEKRLEGLSKQLDWDVR 36
>d1wi3a_ a.4.1.1 (A:) DNA-binding protein SATB2 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 71
Score = 37.0 bits (85), Expect = 2e-05
Identities = 9/48 (18%), Positives = 18/48 (37%), Gaps = 1/48 (2%)
Query: 45 NSKRQRRQRTHFTSQQLQELEATFAR-NRYPDMSTREEIAMWTNLTEA 91
+ R RT + + L L++ YPD ++ +L +
Sbjct: 3 SGSSGPRSRTKISLEALGILQSFIHDVGLYPDQEAIHTLSAQLDLPKH 50
>d2cqxa1 a.4.1.1 (A:8-66) LAG1 longevity assurance homolog 5,
LASS5 {Mouse (Mus musculus) [TaxId: 10090]}
Length = 59
Score = 36.7 bits (85), Expect = 3e-05
Identities = 6/41 (14%), Positives = 14/41 (34%), Gaps = 1/41 (2%)
Query: 51 RQRTHFTSQQLQELEATFAR-NRYPDMSTREEIAMWTNLTE 90
+ + LE F +YPD + ++ + +
Sbjct: 3 KDSPVNKVEPNDTLEKVFVSVTKYPDEKRLKGLSKQLDWSV 43
>d2ecba1 a.4.1.1 (A:8-83) Zinc fingers and homeoboxes protein 1,
ZHX1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 76
Score = 32.0 bits (72), Expect = 0.002
Identities = 9/47 (19%), Positives = 19/47 (40%)
Query: 50 RRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEALRETH 96
++ T++QL+ L+A+F + + T LT +
Sbjct: 5 PQKFKEKTAEQLRVLQASFLNSSVLTDEELNRLRAQTKLTRREIDAW 51
>d2ecca1 a.4.1.1 (A:1-76) Homeobox-leucine zipper protein Homez
{Human (Homo sapiens) [TaxId: 9606]}
Length = 76
Score = 30.9 bits (69), Expect = 0.006
Identities = 7/47 (14%), Positives = 16/47 (34%)
Query: 50 RRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEALRETH 96
T +QL L++ F + ++ +++ T L
Sbjct: 4 GSSGKRKTKEQLAILKSFFLQCQWARREDYQKLEQITGLPRPEIIQW 50
>d1bjfa_ a.39.1.5 (A:) Neurocalcin {Cow (Bos taurus) [TaxId:
9913]}
Length = 181
Score = 27.9 bits (61), Expect = 0.19
Identities = 12/47 (25%), Positives = 18/47 (38%)
Query: 39 NSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMW 85
NSK + + T FT ++QE F R+ + EE
Sbjct: 1 NSKLRPEVMQDLLESTDFTEHEIQEWYKGFLRDCPSGHLSMEEFKKI 47
>d1g8ia_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 187
Score = 27.5 bits (60), Expect = 0.23
Identities = 9/31 (29%), Positives = 17/31 (54%)
Query: 38 SNSKNTKNSKRQRRQRTHFTSQQLQELEATF 68
SNSK + ++T+FT +++Q+ F
Sbjct: 1 SNSKLKPEVVEELTRKTYFTEKEVQQWYKGF 31
>d1fpwa_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1)
{Baker's yeast (Saccharomyces cerevisiae) [TaxId:
4932]}
Length = 190
Score = 27.1 bits (59), Expect = 0.32
Identities = 11/49 (22%), Positives = 22/49 (44%)
Query: 37 SSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMW 85
+ SK +K+ +Q T+F +++Q+ F R+ RE+
Sbjct: 3 AKTSKLSKDDLTCLKQSTYFDRREIQQWHKGFLRDCPSGQLAREDFVKI 51
>d1omra_ a.39.1.5 (A:) Recoverin {Cow (Bos taurus) [TaxId: 9913]}
Length = 201
Score = 26.3 bits (57), Expect = 0.62
Identities = 10/50 (20%), Positives = 20/50 (40%)
Query: 36 SSSNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMSTREEIAMW 85
+S + +K + + T FT ++L +F + TR+E
Sbjct: 2 NSKSGALSKEILEELQLNTKFTEEELSSWYQSFLKECPSGRITRQEFQTI 51
>d1tuza_ a.39.1.7 (A:) Diacylglycerol kinase alpha, N-terminal
domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 118
Score = 23.4 bits (50), Expect = 4.8
Identities = 2/31 (6%), Positives = 14/31 (45%)
Query: 38 SNSKNTKNSKRQRRQRTHFTSQQLQELEATF 68
+ + Q ++ ++++++ ++ F
Sbjct: 4 ERGLISPSDFAQLQKYMEYSTKKVSDVLKLF 34
>d1auib_ a.39.1.5 (B:) Calcineurin regulatory subunit (B-chain)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 165
Score = 23.5 bits (49), Expect = 6.2
Identities = 4/17 (23%), Positives = 10/17 (58%)
Query: 54 THFTSQQLQELEATFAR 70
+HF + +++ L F +
Sbjct: 8 SHFDADEIKRLGKRFKK 24
>d1lbua2 d.65.1.1 (A:84-213) Zn2+ DD-carboxypeptidase C-terminal
catalytic domain {Streptomyces albus G [TaxId: 1962]}
Length = 130
Score = 23.0 bits (49), Expect = 7.9
Identities = 6/40 (15%), Positives = 16/40 (40%)
Query: 55 HFTSQQLQELEATFARNRYPDMSTREEIAMWTNLTEALRE 94
+FT +L + ++ + + R + +A+R
Sbjct: 2 NFTYAELNRCNSDWSGGKVSAATARANALVTMWKLQAMRH 41
>d1iu4a_ d.3.1.8 (A:) Microbial transglutaminase
{Streptoverticillium mobaraense [TaxId: 35621]}
Length = 331
Score = 23.1 bits (49), Expect = 8.6
Identities = 20/77 (25%), Positives = 32/77 (41%), Gaps = 13/77 (16%)
Query: 14 IGNIKTELSNHNDSI--EDSSAKDSSS----------NSKNTKNSK-RQRRQRTHFTSQQ 60
+ N+K EL+N ND++ ED+ + S+ N N S+ + HF S Q
Sbjct: 147 LDNLKKELANGNDALRNEDARSPFYSALRNTPSFKERNGGNHDPSRMKAVIYSKHFWSGQ 206
Query: 61 LQELEATFARNRYPDMS 77
+ A + PD
Sbjct: 207 DRSSSADKRKYGDPDAF 223
>d1xg7a_ a.96.1.6 (A:) Hypothetical protein PF0904 {Pyrococcus
furiosus [TaxId: 2261]}
Length = 245
Score = 22.9 bits (49), Expect = 9.2
Identities = 8/48 (16%), Positives = 13/48 (27%), Gaps = 1/48 (2%)
Query: 38 SNSKNTKNSKRQRRQRTHFTSQQLQELEATFARNRYPDMS-TREEIAM 84
SKN + + R L L Y +M + +
Sbjct: 91 PKSKNNRRLIEAKLNRIRKVEGFLSTLTLKDLEGYYKNMKMLWKALIK 138
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.311 0.124 0.338
Gapped
Lambda K H
0.267 0.0654 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 336,984
Number of extensions: 11301
Number of successful extensions: 79
Number of sequences better than 10.0: 1
Number of HSP's gapped: 71
Number of HSP's successfully gapped: 44
Length of query: 104
Length of database: 2,407,596
Length adjustment: 65
Effective length of query: 39
Effective length of database: 1,515,146
Effective search space: 59090694
Effective search space used: 59090694
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 47 (22.0 bits)