BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy15889
(92 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|242017518|ref|XP_002429235.1| Pituitary homeobox, putative [Pediculus humanus corporis]
gi|212514124|gb|EEB16497.1| Pituitary homeobox, putative [Pediculus humanus corporis]
Length = 302
Score = 127 bits (320), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 68/85 (80%), Positives = 73/85 (85%), Gaps = 6/85 (7%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRERNAMNAAAAAA DFKNGF TQFNGLMQ F D
Sbjct: 86 EEIAMWTNLTEARVRVWFKNRRAKWRKRERNAMNAAAAAAADFKNGFGTQFNGLMQPFTD 145
Query: 58 TDSLYTSAYSSYNNWASKVPSPLGT 82
TDSLY S+YS+YNNWA+KVPSPLGT
Sbjct: 146 TDSLY-SSYSTYNNWAAKVPSPLGT 169
>gi|148298661|ref|NP_001091838.1| pituitary homeobox1 [Bombyx mori]
gi|121582239|dbj|BAF44479.1| pituitary homeobox1 [Bombyx mori]
Length = 387
Score = 127 bits (320), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 71/96 (73%), Positives = 76/96 (79%), Gaps = 11/96 (11%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRERNAMNAAAAAA DFKNGFSTQFNGLMQ FPD
Sbjct: 177 EEIAMWTNLTEARVRVWFKNRRAKWRKRERNAMNAAAAAAADFKNGFSTQFNGLMQPFPD 236
Query: 58 TDSLYTSAYSSYNNWASKVPSPLGTIG----VNDLG 89
TD+LY+S YNNWA+KVPSPLGT VN LG
Sbjct: 237 TDALYSSY--PYNNWAAKVPSPLGTKSFPWPVNPLG 270
>gi|357615722|gb|EHJ69804.1| pituitary homeobox1 [Danaus plexippus]
Length = 377
Score = 126 bits (316), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/96 (72%), Positives = 76/96 (79%), Gaps = 11/96 (11%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRERNAMNAAAAAA DFKNGFSTQFNGLMQ FPD
Sbjct: 172 EEIAMWTNLTEARVRVWFKNRRAKWRKRERNAMNAAAAAAADFKNGFSTQFNGLMQPFPD 231
Query: 58 TDSLYTSAYSSYNNWASKVPSPLGTIG----VNDLG 89
T++LY+S YNNWA+KVPSPLGT VN LG
Sbjct: 232 TEALYSSY--PYNNWAAKVPSPLGTKSFPWPVNPLG 265
>gi|193624928|ref|XP_001949221.1| PREDICTED: pituitary homeobox homolog Ptx1-like isoform 1
[Acyrthosiphon pisum]
gi|328705300|ref|XP_003242759.1| PREDICTED: pituitary homeobox homolog Ptx1-like isoform 2
[Acyrthosiphon pisum]
gi|328705302|ref|XP_003242760.1| PREDICTED: pituitary homeobox homolog Ptx1-like isoform 3
[Acyrthosiphon pisum]
Length = 429
Score = 125 bits (314), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 72/96 (75%), Positives = 79/96 (82%), Gaps = 9/96 (9%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGF TQFNGLMQ F D
Sbjct: 200 EEIAMWTNLTEARVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFGTQFNGLMQPFTD 259
Query: 58 TDSLYTSAYSSYNNWASKVPSPLGTI----GVNDLG 89
TDSLY++AY+SYNNWA+KVPSPLG+ VN LG
Sbjct: 260 TDSLYSTAYTSYNNWATKVPSPLGSKTFPWSVNPLG 295
>gi|189234679|ref|XP_970167.2| PREDICTED: similar to pituitary homeobox1 [Tribolium castaneum]
Length = 517
Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats.
Identities = 62/85 (72%), Positives = 68/85 (80%), Gaps = 8/85 (9%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRERNAMNA AAA +FK GF TQFNGLM TF D
Sbjct: 198 EEIAMWTNLTEARVRVWFKNRRAKWRKRERNAMNAMNAAA-EFKTGFGTQFNGLMPTFGD 256
Query: 58 TDSLYTSAYSSYNNWASKVPSPLGT 82
TD+LY+S SYNNWA+KVPSPLGT
Sbjct: 257 TDTLYSS--YSYNNWATKVPSPLGT 279
>gi|270002832|gb|EEZ99279.1| Ptx1 [Tribolium castaneum]
Length = 508
Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats.
Identities = 62/85 (72%), Positives = 68/85 (80%), Gaps = 8/85 (9%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRERNAMNA AAA +FK GF TQFNGLM TF D
Sbjct: 198 EEIAMWTNLTEARVRVWFKNRRAKWRKRERNAMNAMNAAA-EFKTGFGTQFNGLMPTFGD 256
Query: 58 TDSLYTSAYSSYNNWASKVPSPLGT 82
TD+LY+S SYNNWA+KVPSPLGT
Sbjct: 257 TDTLYSS--YSYNNWATKVPSPLGT 279
>gi|170053388|ref|XP_001862650.1| homeobox protein [Culex quinquefasciatus]
gi|167873959|gb|EDS37342.1| homeobox protein [Culex quinquefasciatus]
Length = 644
Score = 102 bits (253), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 58/84 (69%), Positives = 62/84 (73%), Gaps = 13/84 (15%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRERN MNA AAA DFKNGF QF +Q F D
Sbjct: 366 EEIAMWTNLTEARVRVWFKNRRAKWRKRERNQMNAIAAA--DFKNGFGPQF---VQPFAD 420
Query: 58 TDSLYTSAYSSYNNWASKVPSPLG 81
TDSLY+S SYNNWA KVPSPLG
Sbjct: 421 TDSLYSSY--SYNNWA-KVPSPLG 441
>gi|170061749|ref|XP_001866371.1| homeobox protein [Culex quinquefasciatus]
gi|167879868|gb|EDS43251.1| homeobox protein [Culex quinquefasciatus]
Length = 624
Score = 102 bits (253), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 58/84 (69%), Positives = 62/84 (73%), Gaps = 13/84 (15%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRERN MNA AAA DFKNGF QF +Q F D
Sbjct: 276 EEIAMWTNLTEARVRVWFKNRRAKWRKRERNQMNAIAAA--DFKNGFGPQF---VQPFAD 330
Query: 58 TDSLYTSAYSSYNNWASKVPSPLG 81
TDSLY+S SYNNWA KVPSPLG
Sbjct: 331 TDSLYSSY--SYNNWA-KVPSPLG 351
>gi|347963348|ref|XP_310944.5| AGAP000190-PA [Anopheles gambiae str. PEST]
gi|333467242|gb|EAA06466.6| AGAP000190-PA [Anopheles gambiae str. PEST]
Length = 493
Score = 101 bits (251), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 56/84 (66%), Positives = 62/84 (73%), Gaps = 13/84 (15%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRERN MNA AAA DFKNGF QF +Q F D
Sbjct: 279 EEIAMWTNLTEARVRVWFKNRRAKWRKRERNQMNAIAAA--DFKNGFGPQF---VQPFAD 333
Query: 58 TDSLYTSAYSSYNNWASKVPSPLG 81
TD+LY+S +YNNWA KVPSPLG
Sbjct: 334 TDTLYSSY--TYNNWA-KVPSPLG 354
>gi|295798066|emb|CBL87030.1| ptx protein [Tribolium castaneum]
Length = 276
Score = 100 bits (250), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 56/85 (65%), Positives = 62/85 (72%), Gaps = 8/85 (9%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKR R A AA +FK GF TQFNGLM TF D
Sbjct: 79 EEIAMWTNLTEARVRVWFKNRRAKWRKRGR-NAMNAMNAAAEFKTGFGTQFNGLMPTFGD 137
Query: 58 TDSLYTSAYSSYNNWASKVPSPLGT 82
TD+LY+S SYNNWA+KVPSPLGT
Sbjct: 138 TDTLYSSY--SYNNWATKVPSPLGT 160
>gi|242046476|ref|XP_002399444.1| Pituitary homeobox, putative [Ixodes scapularis]
gi|215497544|gb|EEC07038.1| Pituitary homeobox, putative [Ixodes scapularis]
Length = 174
Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 51/73 (69%), Positives = 55/73 (75%), Gaps = 10/73 (13%)
Query: 9 LRVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPDTDSLYTSAYSS 68
+ ++VWFKNRRAKWRKRERNA + KNGF TQFNGLMQ F DSLY S YSS
Sbjct: 1 MNLKVWFKNRRAKWRKRERNAT-------AELKNGFGTQFNGLMQPF--DDSLY-SGYSS 50
Query: 69 YNNWASKVPSPLG 81
YNNWASKVPSPLG
Sbjct: 51 YNNWASKVPSPLG 63
>gi|157117543|ref|XP_001658818.1| homeobox protein [Aedes aegypti]
gi|108876010|gb|EAT40235.1| AAEL008022-PA [Aedes aegypti]
Length = 482
Score = 96.7 bits (239), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/84 (67%), Positives = 61/84 (72%), Gaps = 14/84 (16%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRERN MNA AAA DFKNGF QF +Q F D
Sbjct: 269 EEIAMWTNLTEARVRVWFKNRRAKWRKRERNQMNAIAAA--DFKNGFGPQF---VQPFAD 323
Query: 58 TDSLYTSAYSSYNNWASKVPSPLG 81
TD LY+S SYNNWA KVPSPLG
Sbjct: 324 TD-LYSSY--SYNNWA-KVPSPLG 343
>gi|75025938|sp|Q9U637.1|PITX_BRABE RecName: Full=Pituitary homeobox x; AltName: Full=Bicoid type
transcription factor Pitx; Short=BbPtx; AltName:
Full=Homeobox protein Ptx; AltName: Full=Paired-like
homeodomain transcription factor x
gi|6110623|gb|AAF03901.1|AF195616_1 bicoid type transcription factor Pitx [Branchiostoma belcheri]
Length = 331
Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/83 (57%), Positives = 54/83 (65%), Gaps = 14/83 (16%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A W RVRVWFKNRRAKWRKRERN + +FKNGF FNGLMQ F
Sbjct: 136 EEIAAWTNLTEARVRVWFKNRRAKWRKRERNQLG-------EFKNGFGPHFNGLMQPF-- 186
Query: 58 TDSLYTSAYSSYNNWASKVPSPL 80
D LY+ +YNNWA+KVPSPL
Sbjct: 187 DDGLYSGYSPAYNNWAAKVPSPL 209
>gi|260802145|ref|XP_002595953.1| hypothetical protein BRAFLDRAFT_267830 [Branchiostoma floridae]
gi|229281206|gb|EEN51965.1| hypothetical protein BRAFLDRAFT_267830 [Branchiostoma floridae]
Length = 332
Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/83 (57%), Positives = 54/83 (65%), Gaps = 14/83 (16%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A W RVRVWFKNRRAKWRKRERN + +FKNGF FNGLMQ F
Sbjct: 137 EEIAAWTNLTEARVRVWFKNRRAKWRKRERNQLG-------EFKNGFGPHFNGLMQPF-- 187
Query: 58 TDSLYTSAYSSYNNWASKVPSPL 80
D LY+ +YNNWA+KVPSPL
Sbjct: 188 DDGLYSGYSPAYNNWAAKVPSPL 210
>gi|383859051|ref|XP_003705011.1| PREDICTED: uncharacterized protein LOC100880156 [Megachile
rotundata]
Length = 420
Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/83 (66%), Positives = 61/83 (73%), Gaps = 9/83 (10%)
Query: 12 RVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFS-TQFNG-LMQTFPDTDSLYTSAYSSY 69
RVWFKNRRAKWRK+ERNA AAAA VDFK GFS NG + Q FPD D+LY+S YS+Y
Sbjct: 80 RVWFKNRRAKWRKKERNAN--AAAATVDFKMGFSAASLNGFITQPFPDPDALYSS-YSTY 136
Query: 70 NNWASKVPSPLGTIG---VNDLG 89
NNWA KVPSPL + VN LG
Sbjct: 137 NNWA-KVPSPLSSKSFPWVNTLG 158
>gi|321456225|gb|EFX67338.1| hypothetical protein DAPPUDRAFT_331172 [Daphnia pulex]
Length = 253
Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/95 (57%), Positives = 63/95 (66%), Gaps = 11/95 (11%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRERNAMNAAAAAA DFK+ F+ QFNGLMQ F
Sbjct: 67 EEIAMWTNLTEPRVRVWFKNRRAKWRKRERNAMNAAAAAAADFKSSFTPQFNGLMQPFGS 126
Query: 58 TDSLYTS------AYSSYNNWASKVPSPLGTIGVN 86
+ + A +YN+WA KVPSPL N
Sbjct: 127 AAADEAALYAAGYAPPTYNSWAGKVPSPLAGTAKN 161
>gi|23094220|emb|CAD27489.1| paired superclass homeobox transcription factor [Branchiostoma
floridae]
Length = 209
Score = 91.3 bits (225), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 48/83 (57%), Positives = 54/83 (65%), Gaps = 14/83 (16%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A W RVRVWFKNRRAKWRKRERN + +FKNGF FNGLMQ F
Sbjct: 23 EEIAAWTNLTEARVRVWFKNRRAKWRKRERNQLG-------EFKNGFGPHFNGLMQPF-- 73
Query: 58 TDSLYTSAYSSYNNWASKVPSPL 80
D LY+ +YNNWA+KVPSPL
Sbjct: 74 DDGLYSGYSPAYNNWAAKVPSPL 96
>gi|322802837|gb|EFZ23033.1| hypothetical protein SINV_03485 [Solenopsis invicta]
Length = 273
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/70 (75%), Positives = 60/70 (85%), Gaps = 3/70 (4%)
Query: 13 VWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFST-QFNG-LMQTFPDTDSLYTSAYSSYN 70
VWFKNRRAKWRK+ERNAMNAAA AA DFK+GFST NG + Q FPD D+LY+S YS+YN
Sbjct: 1 VWFKNRRAKWRKKERNAMNAAAQAAADFKSGFSTASLNGFITQPFPDPDTLYSS-YSTYN 59
Query: 71 NWASKVPSPL 80
NWA+KVPSPL
Sbjct: 60 NWAAKVPSPL 69
>gi|332021209|gb|EGI61594.1| Pituitary homeobox 1-like protein [Acromyrmex echinatior]
Length = 296
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/71 (76%), Positives = 61/71 (85%), Gaps = 3/71 (4%)
Query: 12 RVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFST-QFNGLM-QTFPDTDSLYTSAYSSY 69
RVWFKNRRAKWRK+ERNAMNAAA AA DFK+GFST NG + Q FPD D+LY+S YS+Y
Sbjct: 105 RVWFKNRRAKWRKKERNAMNAAAQAAADFKSGFSTASLNGFITQPFPDPDTLYSS-YSTY 163
Query: 70 NNWASKVPSPL 80
NNWA+KVPSPL
Sbjct: 164 NNWAAKVPSPL 174
>gi|71006814|dbj|BAE07208.1| Pitx homolog [Asterina pectinifera]
Length = 328
Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/87 (58%), Positives = 58/87 (66%), Gaps = 16/87 (18%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A W RVRVWFKNRRAKWRKRERN +N + KNGF +QFNGLMQ F
Sbjct: 139 EEIAAWTNLTESRVRVWFKNRRAKWRKRERNQLN-------ELKNGFGSQFNGLMQPF-- 189
Query: 58 TDSLYTSAYSSYNNWASKVPSPLGTIG 84
D LY S Y SYNNWA+K +PLG+ G
Sbjct: 190 DDGLY-SGY-SYNNWAAKSANPLGSKG 214
>gi|156550319|ref|XP_001603592.1| PREDICTED: pituitary homeobox homolog Ptx1-like [Nasonia
vitripennis]
Length = 531
Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/84 (64%), Positives = 59/84 (70%), Gaps = 8/84 (9%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQ-FNGLMQTFP 56
E +A+W RVRVWFKNRRAKWRKRERNA+NAAA A +FK FS N + Q F
Sbjct: 241 EEIAMWTSLSEARVRVWFKNRRAKWRKRERNAINAAAVVAENFKTNFSPAGLNFINQPFA 300
Query: 57 DTDSLYTSAYSSYNNWASKVPSPL 80
D DS Y YSSYNNWASKVPSPL
Sbjct: 301 DPDSFYN--YSSYNNWASKVPSPL 322
>gi|195452834|ref|XP_002073520.1| GK14162 [Drosophila willistoni]
gi|194169605|gb|EDW84506.1| GK14162 [Drosophila willistoni]
Length = 751
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/96 (61%), Positives = 63/96 (65%), Gaps = 17/96 (17%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRER AA AA DFK+GF TQF MQ F D
Sbjct: 414 EEIAMWTNLTEARVRVWFKNRRAKWRKRER-NAMNAAVAAADFKSGFGTQF---MQPFAD 469
Query: 58 TDSLYTSAYSSYNNWASKVPSPLGTI----GVNDLG 89
DSLYTS YNNW +KVPSPLGT VN LG
Sbjct: 470 -DSLYTSY--PYNNW-TKVPSPLGTKPFPWPVNPLG 501
>gi|209947389|gb|ACI97436.1| paired superclass homeobox transcription factor Pitx [Lottia
gigantea]
Length = 196
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/73 (64%), Positives = 50/73 (68%), Gaps = 11/73 (15%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPDTDSLYTSAYSSY 69
RVRVWFKNRRAKWRKRERN FKNGF +QF G MQ P D LYT SY
Sbjct: 37 RVRVWFKNRRAKWRKRERN--------IEPFKNGFGSQFTGFMQP-PFDDGLYTGY--SY 85
Query: 70 NNWASKVPSPLGT 82
NNWA+KVPSPLG+
Sbjct: 86 NNWAAKVPSPLGS 98
>gi|195113185|ref|XP_002001149.1| GI22129 [Drosophila mojavensis]
gi|193917743|gb|EDW16610.1| GI22129 [Drosophila mojavensis]
Length = 603
Score = 85.5 bits (210), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/96 (61%), Positives = 63/96 (65%), Gaps = 17/96 (17%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRER AA AA DFK+GF TQF MQ F D
Sbjct: 395 EEIAMWTNLTEARVRVWFKNRRAKWRKRER-NAMNAAVAAADFKSGFGTQF---MQPFAD 450
Query: 58 TDSLYTSAYSSYNNWASKVPSPLGTI----GVNDLG 89
DSLYTS YNNW +KVPSPLGT VN LG
Sbjct: 451 -DSLYTSY--PYNNW-TKVPSPLGTKPFPWPVNPLG 482
>gi|198449449|ref|XP_001357586.2| GA13007 [Drosophila pseudoobscura pseudoobscura]
gi|198130612|gb|EAL26720.2| GA13007 [Drosophila pseudoobscura pseudoobscura]
Length = 588
Score = 85.1 bits (209), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/96 (61%), Positives = 63/96 (65%), Gaps = 17/96 (17%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRER AA AA DFK+GF TQF MQ F D
Sbjct: 380 EEIAMWTNLTEARVRVWFKNRRAKWRKRER-NAMNAAVAAADFKSGFGTQF---MQPFAD 435
Query: 58 TDSLYTSAYSSYNNWASKVPSPLGTI----GVNDLG 89
DSLYTS YNNW +KVPSPLGT VN LG
Sbjct: 436 -DSLYTSY--PYNNW-TKVPSPLGTKPFPWPVNPLG 467
>gi|195159085|ref|XP_002020413.1| GL13525 [Drosophila persimilis]
gi|194117182|gb|EDW39225.1| GL13525 [Drosophila persimilis]
Length = 589
Score = 85.1 bits (209), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/96 (61%), Positives = 63/96 (65%), Gaps = 17/96 (17%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRER AA AA DFK+GF TQF MQ F D
Sbjct: 381 EEIAMWTNLTEARVRVWFKNRRAKWRKRER-NAMNAAVAAADFKSGFGTQF---MQPFAD 436
Query: 58 TDSLYTSAYSSYNNWASKVPSPLGTI----GVNDLG 89
DSLYTS YNNW +KVPSPLGT VN LG
Sbjct: 437 -DSLYTSY--PYNNW-TKVPSPLGTKPFPWPVNPLG 468
>gi|380021634|ref|XP_003694665.1| PREDICTED: uncharacterized protein LOC100868419 [Apis florea]
Length = 619
Score = 84.0 bits (206), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 48/81 (59%), Positives = 54/81 (66%), Gaps = 7/81 (8%)
Query: 13 VWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLM-QTFPDTDSLYTSAYSSYNN 71
VWFKNRRAKWRK+ RNA AA VDFK GF N + Q F D D+LY+S YS YNN
Sbjct: 275 VWFKNRRAKWRKQTRNANT--AADTVDFKPGFGASLNSFIGQPFADPDALYSS-YSPYNN 331
Query: 72 WASKVPSPLGTIG---VNDLG 89
WA+KVPSPL + VN LG
Sbjct: 332 WAAKVPSPLSSKSFPWVNTLG 352
>gi|442621993|ref|NP_001138130.2| Ptx1, isoform E [Drosophila melanogaster]
gi|440218093|gb|ACL83586.2| Ptx1, isoform E [Drosophila melanogaster]
Length = 610
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/96 (60%), Positives = 63/96 (65%), Gaps = 17/96 (17%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRER AA AA DFK+GF TQF MQ F D
Sbjct: 295 EEIAMWTNLTEARVRVWFKNRRAKWRKRER-NAMNAAVAAADFKSGFGTQF---MQPFAD 350
Query: 58 TDSLYTSAYSSYNNWASKVPSPLGTI----GVNDLG 89
DSLY+S YNNW +KVPSPLGT VN LG
Sbjct: 351 -DSLYSSY--PYNNW-TKVPSPLGTKPFPWPVNPLG 382
>gi|195505320|ref|XP_002099453.1| GE10911 [Drosophila yakuba]
gi|194185554|gb|EDW99165.1| GE10911 [Drosophila yakuba]
Length = 717
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/96 (60%), Positives = 63/96 (65%), Gaps = 17/96 (17%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRER AA AA DFK+GF TQF MQ F D
Sbjct: 416 EEIAMWTNLTEARVRVWFKNRRAKWRKRER-NAMNAAVAAADFKSGFGTQF---MQPFAD 471
Query: 58 TDSLYTSAYSSYNNWASKVPSPLGTI----GVNDLG 89
DSLY+S YNNW +KVPSPLGT VN LG
Sbjct: 472 -DSLYSSY--PYNNW-TKVPSPLGTKPFPWPVNPLG 503
>gi|194765091|ref|XP_001964661.1| GF22931 [Drosophila ananassae]
gi|190614933|gb|EDV30457.1| GF22931 [Drosophila ananassae]
Length = 605
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/96 (60%), Positives = 63/96 (65%), Gaps = 17/96 (17%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRER AA AA DFK+GF TQF MQ F D
Sbjct: 391 EEIAMWTNLTEARVRVWFKNRRAKWRKRER-NAMNAAVAAADFKSGFGTQF---MQPFAD 446
Query: 58 TDSLYTSAYSSYNNWASKVPSPLGTI----GVNDLG 89
DSLY+S YNNW +KVPSPLGT VN LG
Sbjct: 447 -DSLYSSY--PYNNW-TKVPSPLGTKPFPWPVNPLG 478
>gi|195575199|ref|XP_002105567.1| GD21552 [Drosophila simulans]
gi|194201494|gb|EDX15070.1| GD21552 [Drosophila simulans]
Length = 592
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/96 (60%), Positives = 63/96 (65%), Gaps = 17/96 (17%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRER AA AA DFK+GF TQF MQ F D
Sbjct: 295 EEIAMWTNLTEARVRVWFKNRRAKWRKRER-NAMNAAVAAADFKSGFGTQF---MQPFAD 350
Query: 58 TDSLYTSAYSSYNNWASKVPSPLGTI----GVNDLG 89
DSLY+S YNNW +KVPSPLGT VN LG
Sbjct: 351 -DSLYSSY--PYNNW-TKVPSPLGTKPFPWPVNPLG 382
>gi|195390899|ref|XP_002054104.1| GJ24250 [Drosophila virilis]
gi|194152190|gb|EDW67624.1| GJ24250 [Drosophila virilis]
Length = 709
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/96 (60%), Positives = 63/96 (65%), Gaps = 17/96 (17%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRER AA AA DFK+GF TQF MQ F D
Sbjct: 391 EEIAMWTNLTEARVRVWFKNRRAKWRKRER-NAMNAAVAAADFKSGFGTQF---MQPFAD 446
Query: 58 TDSLYTSAYSSYNNWASKVPSPLGTI----GVNDLG 89
DSLY+S YNNW +KVPSPLGT VN LG
Sbjct: 447 -DSLYSSY--PYNNW-TKVPSPLGTKPFPWPVNPLG 478
>gi|195061200|ref|XP_001995944.1| GH14222 [Drosophila grimshawi]
gi|193891736|gb|EDV90602.1| GH14222 [Drosophila grimshawi]
Length = 499
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/96 (60%), Positives = 63/96 (65%), Gaps = 17/96 (17%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRER AA AA DFK+GF TQF MQ F D
Sbjct: 291 EEIAMWTNLTEARVRVWFKNRRAKWRKRER-NAMNAAVAAADFKSGFGTQF---MQPFAD 346
Query: 58 TDSLYTSAYSSYNNWASKVPSPLGTI----GVNDLG 89
DSLY+S YNNW +KVPSPLGT VN LG
Sbjct: 347 -DSLYSSY--PYNNW-TKVPSPLGTKPFPWPVNPLG 378
>gi|28571942|ref|NP_733410.2| Ptx1, isoform A [Drosophila melanogaster]
gi|38258871|sp|O18400.2|PITX_DROME RecName: Full=Pituitary homeobox homolog Ptx1; Short=D-PTX1
gi|28381509|gb|AAF57099.3| Ptx1, isoform A [Drosophila melanogaster]
gi|33589384|gb|AAQ22459.1| RE41906p [Drosophila melanogaster]
gi|220955692|gb|ACL90389.1| Ptx1-PA [synthetic construct]
Length = 509
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/96 (60%), Positives = 63/96 (65%), Gaps = 17/96 (17%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRER AA AA DFK+GF TQF MQ F D
Sbjct: 295 EEIAMWTNLTEARVRVWFKNRRAKWRKRER-NAMNAAVAAADFKSGFGTQF---MQPFAD 350
Query: 58 TDSLYTSAYSSYNNWASKVPSPLGTI----GVNDLG 89
DSLY+S YNNW +KVPSPLGT VN LG
Sbjct: 351 -DSLYSSY--PYNNW-TKVPSPLGTKPFPWPVNPLG 382
>gi|194905149|ref|XP_001981137.1| GG11784 [Drosophila erecta]
gi|190655775|gb|EDV53007.1| GG11784 [Drosophila erecta]
Length = 597
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/96 (60%), Positives = 63/96 (65%), Gaps = 17/96 (17%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRER AA AA DFK+GF TQF MQ F D
Sbjct: 295 EEIAMWTNLTEARVRVWFKNRRAKWRKRER-NAMNAAVAAADFKSGFGTQF---MQPFAD 350
Query: 58 TDSLYTSAYSSYNNWASKVPSPLGTI----GVNDLG 89
DSLY+S YNNW +KVPSPLGT VN LG
Sbjct: 351 -DSLYSSY--PYNNW-TKVPSPLGTKPFPWPVNPLG 382
>gi|328782453|ref|XP_003250146.1| PREDICTED: hypothetical protein LOC100578446 [Apis mellifera]
Length = 515
Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/81 (59%), Positives = 54/81 (66%), Gaps = 7/81 (8%)
Query: 13 VWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLM-QTFPDTDSLYTSAYSSYNN 71
VWFKNRRAKWRK+ RNA AA VDFK GF N + Q F D D+LY+S YS YNN
Sbjct: 171 VWFKNRRAKWRKQTRNANT--AADTVDFKPGFGASLNSFIGQPFADPDALYSS-YSPYNN 227
Query: 72 WASKVPSPLGTIG---VNDLG 89
WA+KVPSPL + VN LG
Sbjct: 228 WAAKVPSPLSSKSFPWVNTLG 248
>gi|45553794|ref|NP_996314.1| Ptx1, isoform C [Drosophila melanogaster]
gi|45446722|gb|AAS65234.1| Ptx1, isoform C [Drosophila melanogaster]
Length = 514
Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/96 (60%), Positives = 63/96 (65%), Gaps = 17/96 (17%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRER AA AA DFK+GF TQF MQ F D
Sbjct: 300 EEIAMWTNLTEARVRVWFKNRRAKWRKRER-NAMNAAVAAADFKSGFGTQF---MQPFAD 355
Query: 58 TDSLYTSAYSSYNNWASKVPSPLGTI----GVNDLG 89
DSLY+S YNNW +KVPSPLGT VN LG
Sbjct: 356 -DSLYSSY--PYNNW-TKVPSPLGTKPFPWPVNPLG 387
>gi|405962541|gb|EKC28207.1| Pituitary homeobox 2 [Crassostrea gigas]
Length = 312
Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/86 (56%), Positives = 56/86 (65%), Gaps = 18/86 (20%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVD-FKNGFSTQFNGLMQTFP 56
E +A W RVRVWFKNRRAKWRKRERN +D +K GF +QF GLMQT P
Sbjct: 123 EEIAAWTNLTEARVRVWFKNRRAKWRKRERN---------IDTYKTGFGSQFTGLMQT-P 172
Query: 57 DTDSLYTSAYSSYNNWASKVPSPLGT 82
DSLY ++Y WA+KVPSPLGT
Sbjct: 173 FDDSLYNGYTNNY--WAAKVPSPLGT 196
>gi|2398591|emb|CAA04801.1| Ptx1 homeodomain protein [Drosophila melanogaster]
Length = 513
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/96 (60%), Positives = 63/96 (65%), Gaps = 17/96 (17%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRER AA AA DFK+GF TQF MQ F D
Sbjct: 299 EEIAMWTNLTEARVRVWFKNRRAKWRKRER-NAMNAAVAAADFKSGFGTQF---MQPFAD 354
Query: 58 TDSLYTSAYSSYNNWASKVPSPLGTI----GVNDLG 89
DSLY+S YNNW +KVPSPLGT VN LG
Sbjct: 355 -DSLYSSY--PYNNW-TKVPSPLGTKPFPWPVNPLG 386
>gi|307166790|gb|EFN60752.1| Pituitary homeobox 1-like protein [Camponotus floridanus]
Length = 448
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/73 (72%), Positives = 60/73 (82%), Gaps = 6/73 (8%)
Query: 13 VWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQ-FNGLM-QTFPDTDSLYTSAYSS-- 68
VWFKNRRAKWRK+ERNAMNAAA AA DFK+GFST NG + Q FPD D+LY+S YS+
Sbjct: 104 VWFKNRRAKWRKKERNAMNAAAQAAADFKSGFSTGVMNGFITQPFPDPDTLYSS-YSTIG 162
Query: 69 -YNNWASKVPSPL 80
YNNWA+KVPSPL
Sbjct: 163 QYNNWAAKVPSPL 175
>gi|28571944|ref|NP_788770.1| Ptx1, isoform B [Drosophila melanogaster]
gi|28381510|gb|AAO41617.1| Ptx1, isoform B [Drosophila melanogaster]
Length = 318
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/96 (60%), Positives = 63/96 (65%), Gaps = 17/96 (17%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRER AA AA DFK+GF TQF MQ F D
Sbjct: 104 EEIAMWTNLTEARVRVWFKNRRAKWRKRER-NAMNAAVAAADFKSGFGTQF---MQPFAD 159
Query: 58 TDSLYTSAYSSYNNWASKVPSPLGTI----GVNDLG 89
DSLY+S YNNW +KVPSPLGT VN LG
Sbjct: 160 -DSLYSSY--PYNNW-TKVPSPLGTKPFPWPVNPLG 191
>gi|269974864|gb|ACZ55229.1| paired superclass homeobox transcription factor Pitx [Lymnaea
stagnalis]
Length = 330
Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 45/73 (61%), Positives = 47/73 (64%), Gaps = 11/73 (15%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPDTDSLYTSAYSSY 69
RVRVWFKNRRAKWRKRERN FK GF QFNGLMQ P D LYT Y
Sbjct: 147 RVRVWFKNRRAKWRKRERNMET--------FKTGFGPQFNGLMQP-PFDDGLYTGY--PY 195
Query: 70 NNWASKVPSPLGT 82
NWA+KVPSPL +
Sbjct: 196 QNWATKVPSPLSS 208
>gi|297595306|gb|ADI48168.1| Pitx [Crepidula fornicata]
Length = 369
Score = 80.9 bits (198), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 44/71 (61%), Positives = 46/71 (64%), Gaps = 11/71 (15%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPDTDSLYTSAYSSY 69
RVRVWFKNRRAKWRKRERN FK GF TQFNGLMQ P D Y +Y
Sbjct: 177 RVRVWFKNRRAKWRKRERNMET--------FKTGFGTQFNGLMQ--PPFDYGLEPGY-AY 225
Query: 70 NNWASKVPSPL 80
NWA+KVPSPL
Sbjct: 226 QNWATKVPSPL 236
>gi|261245041|ref|NP_001158396.1| paired-like homeodomain 2 [Saccoglossus kowalevskii]
gi|90659994|gb|ABD97273.1| pituitary homeobox transcription factor [Saccoglossus kowalevskii]
Length = 306
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/93 (49%), Positives = 56/93 (60%), Gaps = 19/93 (20%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPDTDSLYTSAYSSY 69
RVRVWFKNRRAKWRKRERN +N ++K+ FS G+M F D LY++ YS +
Sbjct: 135 RVRVWFKNRRAKWRKRERNQLN-------EYKHQFSHGHYGMMTPF--DDGLYSTGYSYH 185
Query: 70 -NNWASKVPSPLGTIG---------VNDLGFQS 92
NNW +K PSPLG+ G VN L QS
Sbjct: 186 PNNWVTKAPSPLGSKGFPWALNSMNVNPLSSQS 218
>gi|391336511|ref|XP_003742623.1| PREDICTED: uncharacterized protein LOC100903936 [Metaseiulus
occidentalis]
Length = 521
Score = 79.3 bits (194), Expect = 3e-13, Method: Composition-based stats.
Identities = 47/89 (52%), Positives = 54/89 (60%), Gaps = 18/89 (20%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFST-QFNGLMQTFP 56
E +A+W RVRVWFKNRRAKWRKRERN + D KNGF T QFN ++Q F
Sbjct: 293 EEIAMWTNLTEARVRVWFKNRRAKWRKRERN--------STDLKNGFGTSQFNSIIQPFT 344
Query: 57 ---DTDSLYTSAYSSYNNWASKVPSPLGT 82
DT LY SAY + W KV SPLG+
Sbjct: 345 DPHDTAGLYPSAYPTNTYWG-KVSSPLGS 372
>gi|115665186|ref|XP_787549.2| PREDICTED: pituitary homeobox x-like [Strongylocentrotus
purpuratus]
gi|84095078|dbj|BAE66654.1| paired superclass homeobox transcription factor HpPitx
[Hemicentrotus pulcherrimus]
Length = 303
Score = 78.6 bits (192), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/86 (55%), Positives = 54/86 (62%), Gaps = 17/86 (19%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A W RVR+WFKNRRAKWRKRERN MN + KNG FNGLMQ F
Sbjct: 108 EEIAAWTNLTEPRVRIWFKNRRAKWRKRERNQMN-------ELKNGLGAGFNGLMQPF-- 158
Query: 58 TDSLYTSAYSSYNNW-ASKVPSPLGT 82
D LY S Y SYNNW A+K +PLG+
Sbjct: 159 DDGLY-SGY-SYNNWAAAKTANPLGS 182
>gi|432901826|ref|XP_004076966.1| PREDICTED: pituitary homeobox 3-like [Oryzias latipes]
Length = 294
Score = 78.6 bits (192), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/87 (55%), Positives = 53/87 (60%), Gaps = 18/87 (20%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRERN A KNGF QFNGLMQ +
Sbjct: 91 EEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQ------AELCKNGFGAQFNGLMQPY-- 142
Query: 58 TDSLYTSAYSSYNNWASK--VPSPLGT 82
D +YT SYNNWA+K SPL T
Sbjct: 143 -DDMYTGY--SYNNWATKSLASSPLST 166
>gi|410914303|ref|XP_003970627.1| PREDICTED: pituitary homeobox 2-like isoform 1 [Takifugu rubripes]
Length = 314
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 57/105 (54%), Gaps = 26/105 (24%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRERN A KNGF QFNGLMQ + D
Sbjct: 114 EEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQ------AELCKNGFGPQFNGLMQPYED 167
Query: 58 TDSLYTSAYSSYNNWASK--VPSPLGT--------IGVNDLGFQS 92
YT YNNWA+K P+ L T + VN L Q+
Sbjct: 168 MYPSYT-----YNNWAAKGLTPASLSTKSFPFFNSMNVNPLSSQT 207
>gi|185132152|ref|NP_001117150.1| paired-like homeodomain transcription factor 3alpha [Salmo salar]
gi|158380243|gb|ABW37418.1| paired-like homeodomain transcription factor 3alpha [Salmo salar]
Length = 293
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/86 (54%), Positives = 51/86 (59%), Gaps = 18/86 (20%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRERN A KNGF QFNGLMQ + D
Sbjct: 91 EEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQ------AELCKNGFGAQFNGLMQPYDD 144
Query: 58 TDSLYTSAYSSYNNWASK--VPSPLG 81
S YT YNNWA+K SPL
Sbjct: 145 MYSGYT-----YNNWATKSLASSPLS 165
>gi|239937988|gb|ACS36093.1| pitx homeobox A2 [Eptatretus stoutii]
Length = 263
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/78 (57%), Positives = 48/78 (61%), Gaps = 16/78 (20%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRERN A KNGF QFNGLMQ + D
Sbjct: 70 EEIAVWTNLTEARVRVWFKNRRAKWRKRERNQH------AELCKNGFGPQFNGLMQPYDD 123
Query: 58 TDSLYTSAYSSYNNWASK 75
S Y SYNNWASK
Sbjct: 124 MYSGY-----SYNNWASK 136
>gi|348564619|ref|XP_003468102.1| PREDICTED: pituitary homeobox 2-like [Cavia porcellus]
Length = 613
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/78 (56%), Positives = 49/78 (62%), Gaps = 16/78 (20%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRERN A KNGF QFNGLMQ +
Sbjct: 412 EEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQ------AELCKNGFGPQFNGLMQPY-- 463
Query: 58 TDSLYTSAYSSYNNWASK 75
D +Y Y SYNNWA+K
Sbjct: 464 -DDMYP-GY-SYNNWAAK 478
>gi|239937986|gb|ACS36092.1| pitx homeobox A1 [Eptatretus stoutii]
Length = 268
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/78 (57%), Positives = 48/78 (61%), Gaps = 16/78 (20%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRERN A KNGF QFNGLMQ + D
Sbjct: 75 EEIAVWTNLTEARVRVWFKNRRAKWRKRERNQH------AELCKNGFGPQFNGLMQPYDD 128
Query: 58 TDSLYTSAYSSYNNWASK 75
S Y SYNNWASK
Sbjct: 129 MYSGY-----SYNNWASK 141
>gi|126290051|ref|XP_001365455.1| PREDICTED: pituitary homeobox 1 [Monodelphis domestica]
Length = 306
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/92 (50%), Positives = 56/92 (60%), Gaps = 20/92 (21%)
Query: 1 MGELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDF-KNGFSTQFNGLMQT 54
M E +A+W RVRVWFKNRRAKWRKRERN +D KNG+ QF+GL+Q
Sbjct: 108 MREEIAVWTNLTEPRVRVWFKNRRAKWRKRERNQQ-------MDLCKNGYVPQFSGLVQP 160
Query: 55 FPDTDSLYTSAYSSYNNWASK--VPSPLGTIG 84
+ D + YT YNNWA+K P+PL T G
Sbjct: 161 YEDVYAGYT-----YNNWAAKSLTPAPLSTKG 187
>gi|395504318|ref|XP_003756501.1| PREDICTED: pituitary homeobox 1 [Sarcophilus harrisii]
Length = 306
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/92 (50%), Positives = 56/92 (60%), Gaps = 20/92 (21%)
Query: 1 MGELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDF-KNGFSTQFNGLMQT 54
M E +A+W RVRVWFKNRRAKWRKRERN +D KNG+ QF+GL+Q
Sbjct: 108 MREEIAVWTNLTEPRVRVWFKNRRAKWRKRERNQQ-------MDLCKNGYVPQFSGLVQP 160
Query: 55 FPDTDSLYTSAYSSYNNWASK--VPSPLGTIG 84
+ D + YT YNNWA+K P+PL T G
Sbjct: 161 YEDVYAGYT-----YNNWAAKSLTPAPLSTKG 187
>gi|410914305|ref|XP_003970628.1| PREDICTED: pituitary homeobox 2-like isoform 2 [Takifugu rubripes]
Length = 268
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 57/105 (54%), Gaps = 26/105 (24%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRERN A KNGF QFNGLMQ + D
Sbjct: 68 EEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQ------AELCKNGFGPQFNGLMQPYED 121
Query: 58 TDSLYTSAYSSYNNWASK--VPSPLGT--------IGVNDLGFQS 92
YT YNNWA+K P+ L T + VN L Q+
Sbjct: 122 MYPSYT-----YNNWAAKGLTPASLSTKSFPFFNSMNVNPLSSQT 161
>gi|185132179|ref|NP_001117151.1| paired-like homeodomain transcription factor 3beta [Salmo salar]
gi|158380245|gb|ABW37419.1| paired-like homeodomain transcription factor 3beta [Salmo salar]
Length = 293
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/86 (54%), Positives = 51/86 (59%), Gaps = 18/86 (20%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRERN A KNGF QFNGLMQ + D
Sbjct: 91 EEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQ------AELCKNGFGAQFNGLMQPYDD 144
Query: 58 TDSLYTSAYSSYNNWASK--VPSPLG 81
S Y SYNNWA+K SPL
Sbjct: 145 MYSGY-----SYNNWATKSLASSPLS 165
>gi|269854613|gb|ACZ51351.1| transcription factor Pitx3 [Haplochromis burtoni]
Length = 295
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/78 (56%), Positives = 49/78 (62%), Gaps = 16/78 (20%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRERN A KNGF QFNGLMQ +
Sbjct: 91 EEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQ------AELCKNGFGAQFNGLMQPY-- 142
Query: 58 TDSLYTSAYSSYNNWASK 75
D +YT SYNNWA+K
Sbjct: 143 -DDMYTGY--SYNNWATK 157
>gi|348535087|ref|XP_003455033.1| PREDICTED: pituitary homeobox 3-like [Oreochromis niloticus]
Length = 295
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/78 (56%), Positives = 49/78 (62%), Gaps = 16/78 (20%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRERN A KNGF QFNGLMQ +
Sbjct: 91 EEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQ------AELCKNGFGAQFNGLMQPY-- 142
Query: 58 TDSLYTSAYSSYNNWASK 75
D +YT SYNNWA+K
Sbjct: 143 -DDMYTGY--SYNNWATK 157
>gi|22531353|emb|CAD30206.1| paired superclass homeobox transcription factor [Petromyzon
marinus]
Length = 263
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/78 (56%), Positives = 48/78 (61%), Gaps = 16/78 (20%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRERN A KNGF QFNGLMQ + D
Sbjct: 70 EEIAVWTNLTEARVRVWFKNRRAKWRKRERNQH------AELCKNGFGPQFNGLMQPYDD 123
Query: 58 TDSLYTSAYSSYNNWASK 75
S Y SYNNWA+K
Sbjct: 124 MYSGY-----SYNNWAAK 136
>gi|49115583|gb|AAH73479.1| Pitx2-A protein [Xenopus laevis]
Length = 323
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 48/78 (61%), Gaps = 16/78 (20%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRERN KNGF QFNGLMQ +
Sbjct: 124 EEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQTELC------KNGFGPQFNGLMQPY-- 175
Query: 58 TDSLYTSAYSSYNNWASK 75
D +Y S SYNNWA+K
Sbjct: 176 -DDMYPSY--SYNNWATK 190
>gi|426231015|ref|XP_004009547.1| PREDICTED: uncharacterized protein LOC101119560 [Ovis aries]
Length = 597
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/90 (50%), Positives = 56/90 (62%), Gaps = 19/90 (21%)
Query: 1 MGELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDF-KNGFSTQFNGLMQT 54
M E +A+W RVRVWFKNRRAKWRKRERN +D K G+ QF+GL+Q
Sbjct: 400 MREEIAVWTNLTEPRVRVWFKNRRAKWRKRERNQQ-------LDLCKGGYVPQFSGLVQP 452
Query: 55 FPDTDSLYTSAYSSYNNWASK--VPSPLGT 82
+ D +Y + Y SYNNWA+K P+PL T
Sbjct: 453 Y---DDVYAAGY-SYNNWAAKSLAPAPLST 478
>gi|45387769|ref|NP_991238.1| pituitary homeobox 3 [Danio rerio]
gi|82237957|sp|Q6QU75.1|PITX3_DANRE RecName: Full=Pituitary homeobox 3; AltName: Full=Bicoid-like
homeodomain transcription factor Pitx3; AltName:
Full=Homeobox protein PITX3; AltName: Full=Paired-like
homeodomain transcription factor 3
gi|41059121|gb|AAR98874.1| paired-like homeodomain transcription factor 3 [Danio rerio]
gi|50254062|gb|AAT72155.1| bicoid-like homeodomain transcription factor Pitx3 [Danio rerio]
gi|63101378|gb|AAH94961.1| Paired-like homeodomain transcription factor 3 [Danio rerio]
gi|182889542|gb|AAI65321.1| Pitx3 protein [Danio rerio]
Length = 293
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/78 (56%), Positives = 48/78 (61%), Gaps = 16/78 (20%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRERN A KNGF QFNGLMQ + D
Sbjct: 91 EEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQ------AELCKNGFGAQFNGLMQPYDD 144
Query: 58 TDSLYTSAYSSYNNWASK 75
S Y SYNNWA+K
Sbjct: 145 MYSGY-----SYNNWATK 157
>gi|47227473|emb|CAG04621.1| unnamed protein product [Tetraodon nigroviridis]
Length = 253
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 57/105 (54%), Gaps = 26/105 (24%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRERN A KNGF QFNGLMQ + D
Sbjct: 53 EEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQ------AELCKNGFGPQFNGLMQPYED 106
Query: 58 TDSLYTSAYSSYNNWASK--VPSPLGT--------IGVNDLGFQS 92
YT YNNWA+K P+ L T + VN L Q+
Sbjct: 107 MYPSYT-----YNNWAAKGLTPASLSTKSFPFFNSMNVNPLSSQT 146
>gi|410948419|ref|XP_003980937.1| PREDICTED: uncharacterized protein LOC101087195 [Felis catus]
Length = 895
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/90 (50%), Positives = 56/90 (62%), Gaps = 19/90 (21%)
Query: 1 MGELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDF-KNGFSTQFNGLMQT 54
M E +A+W RVRVWFKNRRAKWRKRERN +D K G+ QF+GL+Q
Sbjct: 714 MREEIAVWTNLTEPRVRVWFKNRRAKWRKRERNQQ-------LDLCKGGYVPQFSGLVQP 766
Query: 55 FPDTDSLYTSAYSSYNNWASK--VPSPLGT 82
+ D +Y + Y SYNNWA+K P+PL T
Sbjct: 767 YED---VYAAGY-SYNNWAAKSLAPAPLST 792
>gi|380692156|dbj|BAL72733.1| paired-like homeodomain transcription factor, partial [Eptatretus
burgeri]
Length = 196
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/78 (57%), Positives = 48/78 (61%), Gaps = 16/78 (20%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRERN A KNGF QFNGLMQ + D
Sbjct: 70 EEIAVWTNLTEARVRVWFKNRRAKWRKRERNQH------AELCKNGFGPQFNGLMQPYDD 123
Query: 58 TDSLYTSAYSSYNNWASK 75
S Y SYNNWASK
Sbjct: 124 MYSGY-----SYNNWASK 136
>gi|255689726|gb|ACU30146.1| paired-like homeodomain transcription factor 1 [Monodelphis
domestica]
Length = 194
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/92 (50%), Positives = 56/92 (60%), Gaps = 20/92 (21%)
Query: 1 MGELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDF-KNGFSTQFNGLMQT 54
M E +A+W RVRVWFKNRRAKWRKRERN +D KNG+ QF+GL+Q
Sbjct: 52 MREEIAVWTNLTEPRVRVWFKNRRAKWRKRERNQQ-------MDLCKNGYVPQFSGLVQP 104
Query: 55 FPDTDSLYTSAYSSYNNWASK--VPSPLGTIG 84
+ D + YT YNNWA+K P+PL T G
Sbjct: 105 YEDVYAGYT-----YNNWAAKSLTPAPLSTKG 131
>gi|62869861|gb|AAY18081.1| Pitx2 [Hippoglossus hippoglossus]
Length = 283
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 47/78 (60%), Gaps = 16/78 (20%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRERN A KNGF QFNGLMQ + D
Sbjct: 95 EEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQ------AELCKNGFGPQFNGLMQPYED 148
Query: 58 TDSLYTSAYSSYNNWASK 75
YT YNNWA+K
Sbjct: 149 MYPSYT-----YNNWAAK 161
>gi|195341650|ref|XP_002037419.1| GM12914 [Drosophila sechellia]
gi|194131535|gb|EDW53578.1| GM12914 [Drosophila sechellia]
Length = 621
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/81 (64%), Positives = 55/81 (67%), Gaps = 12/81 (14%)
Query: 13 VWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPDTDSLYTSAYSSYNNW 72
VWFKNRRAKWRKRER AA AA DFK+GF TQF MQ F D DSLY+S YNNW
Sbjct: 340 VWFKNRRAKWRKRER-NAMNAAVAAADFKSGFGTQF---MQPFAD-DSLYSSY--PYNNW 392
Query: 73 ASKVPSPLGTI----GVNDLG 89
+KVPSPLGT VN LG
Sbjct: 393 -TKVPSPLGTKPFPWPVNPLG 412
>gi|147898431|ref|NP_001079055.1| paired-like homeodomain 2 [Xenopus laevis]
gi|3955071|emb|CAA06697.1| XPtx2b [Xenopus laevis]
Length = 316
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 48/78 (61%), Gaps = 16/78 (20%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRERN KNGF QFNGLMQ +
Sbjct: 117 EEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQTELC------KNGFGPQFNGLMQPY-- 168
Query: 58 TDSLYTSAYSSYNNWASK 75
D +Y S SYNNWA+K
Sbjct: 169 -DDMYPSY--SYNNWATK 183
>gi|17380174|sp|Q9PWR3.1|PITX2_XENLA RecName: Full=Pituitary homeobox 2; AltName: Full=Homeobox protein
PITX2; AltName: Full=Paired-like homeodomain
transcription factor 2; AltName: Full=xPtx2
gi|3955069|emb|CAA06696.1| XPtx2a [Xenopus laevis]
Length = 326
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/78 (56%), Positives = 49/78 (62%), Gaps = 16/78 (20%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRERN A KNGF QFNGLMQ +
Sbjct: 125 EEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQ------AELCKNGFGPQFNGLMQPY-- 176
Query: 58 TDSLYTSAYSSYNNWASK 75
D +Y S SYNNWA+K
Sbjct: 177 -DDMYPSY--SYNNWAAK 191
>gi|62857711|ref|NP_001017227.1| paired-like homeodomain 2 [Xenopus (Silurana) tropicalis]
gi|166796151|gb|AAI59023.1| paired-like homeodomain 2 [Xenopus (Silurana) tropicalis]
Length = 345
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/78 (56%), Positives = 49/78 (62%), Gaps = 16/78 (20%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRERN A KNGF QFNGLMQ +
Sbjct: 144 EEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQ------AELCKNGFGPQFNGLMQPY-- 195
Query: 58 TDSLYTSAYSSYNNWASK 75
D +Y S SYNNWA+K
Sbjct: 196 -DDMYPSY--SYNNWAAK 210
>gi|148234542|ref|NP_001081756.1| paired-like homeodomain 2 [Xenopus laevis]
gi|3406613|gb|AAC29426.1| homeodomain transcription factor Pitx2 [Xenopus laevis]
Length = 326
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/78 (56%), Positives = 49/78 (62%), Gaps = 16/78 (20%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRERN A KNGF QFNGLMQ +
Sbjct: 125 EEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQ------AELCKNGFGPQFNGLMQPY-- 176
Query: 58 TDSLYTSAYSSYNNWASK 75
D +Y S SYNNWA+K
Sbjct: 177 -DDMYPSY--SYNNWAAK 191
>gi|15823607|dbj|BAB69053.1| pitx2 [Paralichthys olivaceus]
Length = 312
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 47/78 (60%), Gaps = 16/78 (20%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRERN A KNGF QFNGLMQ + D
Sbjct: 113 EEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQ------AELCKNGFGPQFNGLMQPYED 166
Query: 58 TDSLYTSAYSSYNNWASK 75
YT YNNWA+K
Sbjct: 167 MYPSYT-----YNNWAAK 179
>gi|171544943|ref|NP_001116388.1| paired-like homeodomain transcription factor 2a [Oryzias latipes]
gi|157410517|gb|ABV53981.1| paired-like homeodomain transcription factor 2a [Oryzias latipes]
Length = 316
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 47/78 (60%), Gaps = 16/78 (20%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRERN A KNGF QFNGLMQ + D
Sbjct: 117 EEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQ------AELCKNGFGPQFNGLMQPYDD 170
Query: 58 TDSLYTSAYSSYNNWASK 75
YT YNNWA+K
Sbjct: 171 MYPSYT-----YNNWAAK 183
>gi|443696883|gb|ELT97498.1| hypothetical protein CAPTEDRAFT_171001 [Capitella teleta]
Length = 351
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/74 (54%), Positives = 45/74 (60%), Gaps = 12/74 (16%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPDTDSLYTSAYSSY 69
RVRVWFKNRRAKWRK+ERN K GF QFNG MQ F DS + YSSY
Sbjct: 167 RVRVWFKNRRAKWRKKERNMET--------LKTGFGPQFNGFMQPF---DSGLYAGYSSY 215
Query: 70 NNW-ASKVPSPLGT 82
N W +K+P PL +
Sbjct: 216 NQWDHAKIPGPLAS 229
>gi|403256605|ref|XP_003920957.1| PREDICTED: uncharacterized protein LOC101038269 [Saimiri
boliviensis boliviensis]
Length = 586
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/90 (50%), Positives = 56/90 (62%), Gaps = 19/90 (21%)
Query: 1 MGELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDF-KNGFSTQFNGLMQT 54
M E +A+W RVRVWFKNRRAKWRKRERN +D K G+ QF+GL+Q
Sbjct: 181 MREEIAVWTNLTEPRVRVWFKNRRAKWRKRERNQQ-------LDLCKGGYVPQFSGLVQP 233
Query: 55 FPDTDSLYTSAYSSYNNWASK--VPSPLGT 82
+ D +Y + Y SYNNWA+K P+PL T
Sbjct: 234 YED---VYAAGY-SYNNWAAKSLAPAPLST 259
>gi|348511920|ref|XP_003443491.1| PREDICTED: pituitary homeobox 2-like isoform 1 [Oreochromis
niloticus]
Length = 313
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 47/78 (60%), Gaps = 16/78 (20%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRERN A KNGF QFNGLMQ + D
Sbjct: 114 EEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQ------AELCKNGFGPQFNGLMQPYDD 167
Query: 58 TDSLYTSAYSSYNNWASK 75
YT YNNWA+K
Sbjct: 168 MYPSYT-----YNNWAAK 180
>gi|185132230|ref|NP_001117154.1| paired-like homeodomain transcription factor 2beta [Salmo salar]
gi|158380241|gb|ABW37417.1| paired-like homeodomain transcription factor 2beta [Salmo salar]
Length = 319
Score = 75.5 bits (184), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 47/78 (60%), Gaps = 16/78 (20%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRERN A KNGF QFNGLMQ + D
Sbjct: 118 EEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQ------AELCKNGFGPQFNGLMQPYED 171
Query: 58 TDSLYTSAYSSYNNWASK 75
YT YNNWA+K
Sbjct: 172 MYPSYT-----YNNWAAK 184
>gi|18859235|ref|NP_571050.1| pituitary homeobox 2 [Danio rerio]
gi|18203562|sp|Q9W5Z2.1|PITX2_DANRE RecName: Full=Pituitary homeobox 2; AltName: Full=Homeobox protein
PITX2; AltName: Full=Paired-like homeodomain
transcription factor 2
gi|4959544|gb|AAD34390.1|AF132446_1 transcription factor Pitx2 isoform c [Danio rerio]
gi|5107929|gb|AAD40179.1|AF156905_1 transcription factor Pitx2c [Danio rerio]
Length = 314
Score = 75.5 bits (184), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 47/78 (60%), Gaps = 16/78 (20%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRERN A KNGF QFNGLMQ + D
Sbjct: 113 EEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQ------AELCKNGFGPQFNGLMQPYDD 166
Query: 58 TDSLYTSAYSSYNNWASK 75
YT YNNWA+K
Sbjct: 167 MYPSYT-----YNNWAAK 179
>gi|355749509|gb|EHH53908.1| hypothetical protein EGM_14619 [Macaca fascicularis]
Length = 374
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 47/78 (60%), Gaps = 16/78 (20%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRERN A KNGF QFNGLMQ + D
Sbjct: 173 EEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQ------AELCKNGFGPQFNGLMQPYDD 226
Query: 58 TDSLYTSAYSSYNNWASK 75
Y SYNNWA+K
Sbjct: 227 MYPGY-----SYNNWAAK 239
>gi|62204427|gb|AAH92922.1| Paired-like homeodomain transcription factor 2 [Danio rerio]
Length = 314
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 47/78 (60%), Gaps = 16/78 (20%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRERN A KNGF QFNGLMQ + D
Sbjct: 113 EEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQ------AELCKNGFGPQFNGLMQPYDD 166
Query: 58 TDSLYTSAYSSYNNWASK 75
YT YNNWA+K
Sbjct: 167 MYPSYT-----YNNWAAK 179
>gi|327274064|ref|XP_003221798.1| PREDICTED: pituitary homeobox 2-like isoform 1 [Anolis
carolinensis]
Length = 339
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 47/78 (60%), Gaps = 16/78 (20%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRERN A KNGF QFNGLMQ + D
Sbjct: 138 EEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQ------AELCKNGFGPQFNGLMQPYDD 191
Query: 58 TDSLYTSAYSSYNNWASK 75
Y SYNNWA+K
Sbjct: 192 MYPGY-----SYNNWAAK 204
>gi|328802693|ref|NP_001192229.1| pituitary homeobox 1 [Bos taurus]
gi|296485327|tpg|DAA27442.1| TPA: paired-like homeodomain 1 [Bos taurus]
Length = 314
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/90 (50%), Positives = 56/90 (62%), Gaps = 19/90 (21%)
Query: 1 MGELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDF-KNGFSTQFNGLMQT 54
M E +A+W RVRVWFKNRRAKWRKRERN +D K G+ QF+GL+Q
Sbjct: 118 MREEIAVWTNLTEPRVRVWFKNRRAKWRKRERNQQ-------LDLCKGGYVPQFSGLVQP 170
Query: 55 FPDTDSLYTSAYSSYNNWASK--VPSPLGT 82
+ D +Y + Y SYNNWA+K P+PL T
Sbjct: 171 Y---DDVYAAGY-SYNNWAAKSLAPAPLST 196
>gi|16758428|ref|NP_446076.1| pituitary homeobox 1 [Rattus norvegicus]
gi|18202678|sp|Q99NA7.1|PITX1_RAT RecName: Full=Pituitary homeobox 1; AltName: Full=Homeobox protein
PITX1; AltName: Full=Paired-like homeodomain
transcription factor 1
gi|13699083|dbj|BAB41202.1| Ptx1 homeodomain protein [Rattus norvegicus]
gi|38303999|gb|AAH61966.1| Paired-like homeodomain 1 [Rattus norvegicus]
gi|149039836|gb|EDL93952.1| paired-like homeodomain transcription factor 1, isoform CRA_a
[Rattus norvegicus]
gi|149039837|gb|EDL93953.1| paired-like homeodomain transcription factor 1, isoform CRA_a
[Rattus norvegicus]
Length = 315
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/90 (50%), Positives = 56/90 (62%), Gaps = 18/90 (20%)
Query: 1 MGELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDF-KNGFSTQFNGLMQT 54
M E +A+W RVRVWFKNRRAKWRKRERN +D K G+ QF+GL+Q
Sbjct: 118 MREEIAVWTNLTEPRVRVWFKNRRAKWRKRERNQQ-------LDLCKGGYVPQFSGLVQP 170
Query: 55 FPDTDSLYTSAYSSYNNWASK--VPSPLGT 82
+ D +Y +A SYNNWA+K P+PL T
Sbjct: 171 YED---VYAAAGYSYNNWAAKSLAPAPLST 197
>gi|332235072|ref|XP_003266727.1| PREDICTED: pituitary homeobox 1 [Nomascus leucogenys]
Length = 336
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/90 (50%), Positives = 56/90 (62%), Gaps = 19/90 (21%)
Query: 1 MGELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDF-KNGFSTQFNGLMQT 54
M E +A+W RVRVWFKNRRAKWRKRERN +D K G+ QF+GL+Q
Sbjct: 118 MREEIAVWTNLTEPRVRVWFKNRRAKWRKRERNQQ-------LDLCKGGYVPQFSGLVQP 170
Query: 55 FPDTDSLYTSAYSSYNNWASK--VPSPLGT 82
+ D +Y + Y SYNNWA+K P+PL T
Sbjct: 171 YED---VYAAGY-SYNNWAAKSLAPAPLST 196
>gi|354504449|ref|XP_003514288.1| PREDICTED: pituitary homeobox 2-like isoform 1 [Cricetulus griseus]
gi|344255585|gb|EGW11689.1| Pituitary homeobox 2 [Cricetulus griseus]
Length = 322
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 47/78 (60%), Gaps = 16/78 (20%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRERN A KNGF QFNGLMQ + D
Sbjct: 123 EEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQ------AELCKNGFGPQFNGLMQPYDD 176
Query: 58 TDSLYTSAYSSYNNWASK 75
Y SYNNWA+K
Sbjct: 177 MYPGY-----SYNNWAAK 189
>gi|185132202|ref|NP_001117152.1| paired-like homeodomain transcription factor 2alpha [Salmo salar]
gi|158380239|gb|ABW37416.1| paired-like homeodomain transcription factor 2alpha [Salmo salar]
Length = 322
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 47/78 (60%), Gaps = 16/78 (20%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRERN A KNGF QFNGLMQ + D
Sbjct: 121 EEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQ------AELCKNGFGPQFNGLMQPYDD 174
Query: 58 TDSLYTSAYSSYNNWASK 75
YT YNNWA+K
Sbjct: 175 MYPSYT-----YNNWAAK 187
>gi|431897152|gb|ELK06414.1| Pituitary homeobox 2 [Pteropus alecto]
Length = 325
Score = 75.1 bits (183), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 47/78 (60%), Gaps = 16/78 (20%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRERN A KNGF QFNGLMQ + D
Sbjct: 124 EEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQ------AELCKNGFGPQFNGLMQPYDD 177
Query: 58 TDSLYTSAYSSYNNWASK 75
Y SYNNWA+K
Sbjct: 178 MYPGY-----SYNNWAAK 190
>gi|348511922|ref|XP_003443492.1| PREDICTED: pituitary homeobox 2-like isoform 2 [Oreochromis
niloticus]
Length = 267
Score = 75.1 bits (183), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 47/78 (60%), Gaps = 16/78 (20%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRERN A KNGF QFNGLMQ + D
Sbjct: 68 EEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQ------AELCKNGFGPQFNGLMQPYDD 121
Query: 58 TDSLYTSAYSSYNNWASK 75
YT YNNWA+K
Sbjct: 122 MYPSYT-----YNNWAAK 134
>gi|45384358|ref|NP_990341.1| pituitary homeobox 2 [Gallus gallus]
gi|6093722|sp|O93385.1|PITX2_CHICK RecName: Full=Pituitary homeobox 2; AltName: Full=Homeobox protein
PITX2; Short=cPITX2; AltName: Full=Paired-like
homeodomain transcription factor 2
gi|3335643|gb|AAC27322.1| transcription factor Pitx2 [Gallus gallus]
Length = 333
Score = 75.1 bits (183), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 47/78 (60%), Gaps = 16/78 (20%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRERN A KNGF QFNGLMQ + D
Sbjct: 132 EEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQ------AELCKNGFGPQFNGLMQPYDD 185
Query: 58 TDSLYTSAYSSYNNWASK 75
Y SYNNWA+K
Sbjct: 186 MYPGY-----SYNNWAAK 198
>gi|7271777|gb|AAF44618.1|AF201091_1 paired-like homeodomain transcription factor Munc 30, partial [Mus
musculus]
Length = 314
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 47/78 (60%), Gaps = 16/78 (20%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRERN A KNGF QFNGLMQ + D
Sbjct: 113 EEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQ------AELCKNGFGPQFNGLMQPYDD 166
Query: 58 TDSLYTSAYSSYNNWASK 75
Y SYNNWA+K
Sbjct: 167 MYPGY-----SYNNWAAK 179
>gi|147901103|ref|NP_001091460.1| pituitary homeobox 2 [Bos taurus]
gi|426231269|ref|XP_004009662.1| PREDICTED: pituitary homeobox 2 isoform 1 [Ovis aries]
gi|146186826|gb|AAI40580.1| PITX2 protein [Bos taurus]
gi|296486755|tpg|DAA28868.1| TPA: paired-like homeodomain 2 [Bos taurus]
gi|440905673|gb|ELR56024.1| Pituitary homeobox 2 [Bos grunniens mutus]
Length = 325
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 47/78 (60%), Gaps = 16/78 (20%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRERN A KNGF QFNGLMQ + D
Sbjct: 124 EEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQ------AELCKNGFGPQFNGLMQPYDD 177
Query: 58 TDSLYTSAYSSYNNWASK 75
Y SYNNWA+K
Sbjct: 178 MYPGY-----SYNNWAAK 190
>gi|4512220|dbj|BAA75247.1| Brx1a homeoprotein [Mus musculus]
Length = 324
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 47/78 (60%), Gaps = 16/78 (20%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRERN A KNGF QFNGLMQ + D
Sbjct: 123 EEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQ------AELCKNGFGPQFNGLMQPYDD 176
Query: 58 TDSLYTSAYSSYNNWASK 75
Y SYNNWA+K
Sbjct: 177 MYPGY-----SYNNWAAK 189
>gi|21361183|ref|NP_000316.2| pituitary homeobox 2 isoform c [Homo sapiens]
gi|114595678|ref|XP_001141234.1| PREDICTED: pituitary homeobox 2 isoform 3 [Pan troglodytes]
gi|397519869|ref|XP_003830075.1| PREDICTED: pituitary homeobox 2 isoform 1 [Pan paniscus]
gi|426345241|ref|XP_004040329.1| PREDICTED: pituitary homeobox 2 [Gorilla gorilla gorilla]
gi|3078011|gb|AAC39718.1| ALL1 responsive protein ARP1c [Homo sapiens]
gi|17315124|gb|AAH13998.1| Paired-like homeodomain 2 [Homo sapiens]
gi|119626668|gb|EAX06263.1| paired-like homeodomain transcription factor 2, isoform CRA_b [Homo
sapiens]
gi|123993501|gb|ABM84352.1| paired-like homeodomain transcription factor 2 [synthetic
construct]
gi|124000463|gb|ABM87740.1| paired-like homeodomain transcription factor 2 [synthetic
construct]
gi|189054179|dbj|BAG36699.1| unnamed protein product [Homo sapiens]
gi|261860068|dbj|BAI46556.1| paired-like homeodomain 2 [synthetic construct]
gi|410342053|gb|JAA39973.1| paired-like homeodomain 2 [Pan troglodytes]
Length = 324
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 47/78 (60%), Gaps = 16/78 (20%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRERN A KNGF QFNGLMQ + D
Sbjct: 123 EEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQ------AELCKNGFGPQFNGLMQPYDD 176
Query: 58 TDSLYTSAYSSYNNWASK 75
Y SYNNWA+K
Sbjct: 177 MYPGY-----SYNNWAAK 189
>gi|109948275|ref|NP_001035967.1| pituitary homeobox 2 isoform c [Mus musculus]
gi|3078015|gb|AAC40087.1| ALL1 responsive protein ARP1c [Mus musculus]
gi|49522682|gb|AAH75660.1| Paired-like homeodomain transcription factor 2 [Mus musculus]
gi|148680299|gb|EDL12246.1| paired-like homeodomain transcription factor 2, isoform CRA_c [Mus
musculus]
Length = 324
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 47/78 (60%), Gaps = 16/78 (20%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRERN A KNGF QFNGLMQ + D
Sbjct: 123 EEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQ------AELCKNGFGPQFNGLMQPYDD 176
Query: 58 TDSLYTSAYSSYNNWASK 75
Y SYNNWA+K
Sbjct: 177 MYPGY-----SYNNWAAK 189
>gi|45581379|dbj|BAD12775.1| Pitx homologue [Lethenteron camtschaticum]
Length = 199
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 44/78 (56%), Positives = 48/78 (61%), Gaps = 16/78 (20%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRERN A KNGF QFNGLMQ + D
Sbjct: 55 EEIAVWTNLTEARVRVWFKNRRAKWRKRERNQH------AELCKNGFGPQFNGLMQPYDD 108
Query: 58 TDSLYTSAYSSYNNWASK 75
S Y SYNNWA+K
Sbjct: 109 MYSGY-----SYNNWAAK 121
>gi|296195751|ref|XP_002745524.1| PREDICTED: pituitary homeobox 2 isoform 2 [Callithrix jacchus]
Length = 325
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 47/78 (60%), Gaps = 16/78 (20%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRERN A KNGF QFNGLMQ + D
Sbjct: 124 EEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQ------AELCKNGFGPQFNGLMQPYDD 177
Query: 58 TDSLYTSAYSSYNNWASK 75
Y SYNNWA+K
Sbjct: 178 MYPGY-----SYNNWAAK 190
>gi|291401270|ref|XP_002717162.1| PREDICTED: paired-like homeodomain 1 isoform 2 [Oryctolagus
cuniculus]
Length = 325
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 47/78 (60%), Gaps = 16/78 (20%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRERN A KNGF QFNGLMQ + D
Sbjct: 124 EEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQ------AELCKNGFGPQFNGLMQPYDD 177
Query: 58 TDSLYTSAYSSYNNWASK 75
Y SYNNWA+K
Sbjct: 178 MYPGY-----SYNNWAAK 190
>gi|109948271|ref|NP_001035970.1| pituitary homeobox 2 isoform 1 [Rattus norvegicus]
gi|17380159|sp|Q9R0W1.1|PITX2_RAT RecName: Full=Pituitary homeobox 2; AltName: Full=Homeobox protein
PITX2; AltName: Full=Paired-like homeodomain
transcription factor 2; AltName: Full=rPtx2
gi|5706494|emb|CAB52283.1| homeodomain protein Ptx2A [Rattus norvegicus]
gi|149025927|gb|EDL82170.1| paired-like homeodomain transcription factor 2, isoform CRA_c
[Rattus norvegicus]
Length = 324
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 47/78 (60%), Gaps = 16/78 (20%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRERN A KNGF QFNGLMQ + D
Sbjct: 123 EEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQ------AELCKNGFGPQFNGLMQPYDD 176
Query: 58 TDSLYTSAYSSYNNWASK 75
Y SYNNWA+K
Sbjct: 177 MYPGY-----SYNNWAAK 189
>gi|109075376|ref|XP_001091288.1| PREDICTED: pituitary homeobox 2-like isoform 4 [Macaca mulatta]
gi|402870246|ref|XP_003899146.1| PREDICTED: pituitary homeobox 2 isoform 3 [Papio anubis]
gi|355687543|gb|EHH26127.1| hypothetical protein EGK_16019 [Macaca mulatta]
Length = 325
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 47/78 (60%), Gaps = 16/78 (20%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRERN A KNGF QFNGLMQ + D
Sbjct: 124 EEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQ------AELCKNGFGPQFNGLMQPYDD 177
Query: 58 TDSLYTSAYSSYNNWASK 75
Y SYNNWA+K
Sbjct: 178 MYPGY-----SYNNWAAK 190
>gi|74002156|ref|XP_851370.1| PREDICTED: pituitary homeobox 2 isoform 2 [Canis lupus familiaris]
Length = 325
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 47/78 (60%), Gaps = 16/78 (20%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRERN A KNGF QFNGLMQ + D
Sbjct: 124 EEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQ------AELCKNGFGPQFNGLMQPYDD 177
Query: 58 TDSLYTSAYSSYNNWASK 75
Y SYNNWA+K
Sbjct: 178 MYPGY-----SYNNWAAK 190
>gi|395851306|ref|XP_003798203.1| PREDICTED: pituitary homeobox 2 isoform 1 [Otolemur garnettii]
Length = 325
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 47/78 (60%), Gaps = 16/78 (20%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRERN A KNGF QFNGLMQ + D
Sbjct: 124 EEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQ------AELCKNGFGPQFNGLMQPYDD 177
Query: 58 TDSLYTSAYSSYNNWASK 75
Y SYNNWA+K
Sbjct: 178 MYPGY-----SYNNWAAK 190
>gi|332240441|ref|XP_003269394.1| PREDICTED: pituitary homeobox 2 isoform 1 [Nomascus leucogenys]
Length = 325
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 47/78 (60%), Gaps = 16/78 (20%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRERN A KNGF QFNGLMQ + D
Sbjct: 124 EEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQ------AELCKNGFGPQFNGLMQPYDD 177
Query: 58 TDSLYTSAYSSYNNWASK 75
Y SYNNWA+K
Sbjct: 178 MYPGY-----SYNNWAAK 190
>gi|297674178|ref|XP_002815113.1| PREDICTED: pituitary homeobox 2 isoform 3 [Pongo abelii]
Length = 325
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 47/78 (60%), Gaps = 16/78 (20%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRERN A KNGF QFNGLMQ + D
Sbjct: 124 EEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQ------AELCKNGFGPQFNGLMQPYDD 177
Query: 58 TDSLYTSAYSSYNNWASK 75
Y SYNNWA+K
Sbjct: 178 MYPGY-----SYNNWAAK 190
>gi|403275550|ref|XP_003929503.1| PREDICTED: pituitary homeobox 2 isoform 3 [Saimiri boliviensis
boliviensis]
Length = 325
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 47/78 (60%), Gaps = 16/78 (20%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRERN A KNGF QFNGLMQ + D
Sbjct: 124 EEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQ------AELCKNGFGPQFNGLMQPYDD 177
Query: 58 TDSLYTSAYSSYNNWASK 75
Y SYNNWA+K
Sbjct: 178 MYPGY-----SYNNWAAK 190
>gi|4959546|gb|AAD34391.1|AF132447_1 transcription factor Pitx2 isoform a [Danio rerio]
gi|5107931|gb|AAD40180.1|AF156906_1 transcription factor Pitx2a [Danio rerio]
gi|6016473|gb|AAF00486.2|AF181681_1 transcription factor Pitx2 [Danio rerio]
Length = 269
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 47/78 (60%), Gaps = 16/78 (20%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRERN A KNGF QFNGLMQ + D
Sbjct: 68 EEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQ------AELCKNGFGPQFNGLMQPYDD 121
Query: 58 TDSLYTSAYSSYNNWASK 75
YT YNNWA+K
Sbjct: 122 MYPSYT-----YNNWAAK 134
>gi|301764282|ref|XP_002917559.1| PREDICTED: pituitary homeobox 2-like isoform 2 [Ailuropoda
melanoleuca]
gi|281346789|gb|EFB22373.1| hypothetical protein PANDA_005886 [Ailuropoda melanoleuca]
Length = 325
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 47/78 (60%), Gaps = 16/78 (20%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRERN A KNGF QFNGLMQ + D
Sbjct: 124 EEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQ------AELCKNGFGPQFNGLMQPYDD 177
Query: 58 TDSLYTSAYSSYNNWASK 75
Y SYNNWA+K
Sbjct: 178 MYPGY-----SYNNWAAK 190
>gi|22531355|emb|CAD30207.1| paired superclass homeobox transcription factor [Lampetra
planeri]
Length = 196
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 44/78 (56%), Positives = 48/78 (61%), Gaps = 16/78 (20%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRERN A KNGF QFNGLMQ + D
Sbjct: 29 EEIAVWTNLTEARVRVWFKNRRAKWRKRERNQH------AELCKNGFGPQFNGLMQPYDD 82
Query: 58 TDSLYTSAYSSYNNWASK 75
S Y SYNNWA+K
Sbjct: 83 MYSGY-----SYNNWAAK 95
>gi|185133870|ref|NP_001117175.1| paired-like homeodomain transcription factor 2alphaA [Salmo salar]
gi|158380247|gb|ABW37420.1| paired-like homeodomain transcription factor 2alphaA [Salmo salar]
Length = 270
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 47/78 (60%), Gaps = 16/78 (20%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRERN A KNGF QFNGLMQ + D
Sbjct: 69 EEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQ------AELCKNGFGPQFNGLMQPYDD 122
Query: 58 TDSLYTSAYSSYNNWASK 75
YT YNNWA+K
Sbjct: 123 MYPSYT-----YNNWAAK 135
>gi|410957003|ref|XP_003985124.1| PREDICTED: pituitary homeobox 2 isoform 1 [Felis catus]
Length = 325
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 47/78 (60%), Gaps = 16/78 (20%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRERN A KNGF QFNGLMQ + D
Sbjct: 124 EEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQ------AELCKNGFGPQFNGLMQPYDD 177
Query: 58 TDSLYTSAYSSYNNWASK 75
Y SYNNWA+K
Sbjct: 178 MYPGY-----SYNNWAAK 190
>gi|118092700|ref|XP_421631.2| PREDICTED: pituitary homeobox 3-like [Gallus gallus]
Length = 292
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/86 (53%), Positives = 50/86 (58%), Gaps = 18/86 (20%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRERN A KN F QFNGLMQ + D
Sbjct: 91 EEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQ------AELCKNSFGAQFNGLMQPYDD 144
Query: 58 TDSLYTSAYSSYNNWASK--VPSPLG 81
S Y SYNNWA+K SPL
Sbjct: 145 MYSSY-----SYNNWATKGLATSPLS 165
>gi|440910451|gb|ELR60247.1| Pituitary homeobox 1, partial [Bos grunniens mutus]
Length = 228
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/90 (50%), Positives = 56/90 (62%), Gaps = 19/90 (21%)
Query: 1 MGELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDF-KNGFSTQFNGLMQT 54
M E +A+W RVRVWFKNRRAKWRKRERN +D K G+ QF+GL+Q
Sbjct: 90 MREEIAVWTNLTEPRVRVWFKNRRAKWRKRERNQQ-------LDLCKGGYVPQFSGLVQP 142
Query: 55 FPDTDSLYTSAYSSYNNWASK--VPSPLGT 82
+ D +Y + Y SYNNWA+K P+PL T
Sbjct: 143 Y---DDVYAAGY-SYNNWAAKSLAPAPLST 168
>gi|449500088|ref|XP_004174919.1| PREDICTED: LOW QUALITY PROTEIN: pituitary homeobox 2 [Taeniopygia
guttata]
Length = 334
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 47/78 (60%), Gaps = 16/78 (20%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRERN A KNGF QFNGLMQ + D
Sbjct: 133 EEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQ------AELCKNGFGPQFNGLMQPYDD 186
Query: 58 TDSLYTSAYSSYNNWASK 75
Y SYNNWA+K
Sbjct: 187 MYPGY-----SYNNWAAK 199
>gi|224068062|ref|XP_002187978.1| PREDICTED: pituitary homeobox 1 isoform 1 [Taeniopygia guttata]
gi|449475013|ref|XP_004175459.1| PREDICTED: pituitary homeobox 1 isoform 2 [Taeniopygia guttata]
Length = 302
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/90 (50%), Positives = 54/90 (60%), Gaps = 20/90 (22%)
Query: 1 MGELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDF-KNGFSTQFNGLMQT 54
M E +A+W RVRVWFKNRRAKWRKRERN +D KNG+ QF+GLMQ
Sbjct: 107 MREEIAVWTNLTEPRVRVWFKNRRAKWRKRERNQQ-------MDLCKNGYVPQFSGLMQP 159
Query: 55 FPDTDSLYTSAYSSYNNWASK--VPSPLGT 82
+ D + Y YNNWA+K P+PL T
Sbjct: 160 YDDMYAGYP-----YNNWATKSLTPAPLST 184
>gi|224052452|ref|XP_002197829.1| PREDICTED: pituitary homeobox 3 [Taeniopygia guttata]
Length = 292
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/86 (53%), Positives = 52/86 (60%), Gaps = 18/86 (20%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRERN A KN F QFNGLMQ +
Sbjct: 91 EEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQ------AELCKNSFGAQFNGLMQPY-- 142
Query: 58 TDSLYTSAYSSYNNWASK--VPSPLG 81
D +Y+S SYNNWA+K SPL
Sbjct: 143 -DDMYSSY--SYNNWATKGLASSPLS 165
>gi|6093720|sp|P56673.1|PITX1_CHICK RecName: Full=Pituitary homeobox 1; AltName: Full=Homeobox protein
PITX1; AltName: Full=Paired-like homeodomain
transcription factor 1; AltName: Full=cPTX1
Length = 311
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/90 (50%), Positives = 54/90 (60%), Gaps = 20/90 (22%)
Query: 1 MGELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDF-KNGFSTQFNGLMQT 54
M E +A+W RVRVWFKNRRAKWRKRERN +D KNG+ QF+GLMQ
Sbjct: 117 MREEIAVWTNLTEPRVRVWFKNRRAKWRKRERNQQ-------MDLCKNGYVPQFSGLMQP 169
Query: 55 FPDTDSLYTSAYSSYNNWASK--VPSPLGT 82
+ D + Y YNNWA+K P+PL T
Sbjct: 170 YDDMYAGYP-----YNNWATKSLTPAPLST 194
>gi|326923546|ref|XP_003207996.1| PREDICTED: pituitary homeobox 3-like [Meleagris gallopavo]
gi|449269113|gb|EMC79919.1| Pituitary homeobox 3 [Columba livia]
Length = 292
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/86 (53%), Positives = 50/86 (58%), Gaps = 18/86 (20%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRERN A KN F QFNGLMQ + D
Sbjct: 91 EEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQ------AELCKNSFGAQFNGLMQPYDD 144
Query: 58 TDSLYTSAYSSYNNWASK--VPSPLG 81
S Y SYNNWA+K SPL
Sbjct: 145 MYSSY-----SYNNWATKGLATSPLS 165
>gi|3236450|gb|AAC23684.1| paired-like homeodomain transcription factor Ptx1 [Gallus gallus]
Length = 302
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/90 (50%), Positives = 54/90 (60%), Gaps = 20/90 (22%)
Query: 1 MGELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDF-KNGFSTQFNGLMQT 54
M E +A+W RVRVWFKNRRAKWRKRERN +D KNG+ QF+GLMQ
Sbjct: 107 MREEIAVWTNLTEPRVRVWFKNRRAKWRKRERNQQ-------MDLCKNGYVPQFSGLMQP 159
Query: 55 FPDTDSLYTSAYSSYNNWASK--VPSPLGT 82
+ D + Y YNNWA+K P+PL T
Sbjct: 160 YDDMYAGYP-----YNNWATKSLTPAPLST 184
>gi|395542234|ref|XP_003773038.1| PREDICTED: pituitary homeobox 2 isoform 2 [Sarcophilus harrisii]
Length = 330
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 47/78 (60%), Gaps = 16/78 (20%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRERN A KNGF QFNGLMQ + D
Sbjct: 129 EEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQ------AELCKNGFGPQFNGLMQPYDD 182
Query: 58 TDSLYTSAYSSYNNWASK 75
Y SYNNWA+K
Sbjct: 183 MYPGY-----SYNNWAAK 195
>gi|327274066|ref|XP_003221799.1| PREDICTED: pituitary homeobox 2-like isoform 2 [Anolis
carolinensis]
Length = 317
Score = 75.1 bits (183), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 47/78 (60%), Gaps = 16/78 (20%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRERN A KNGF QFNGLMQ + D
Sbjct: 116 EEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQ------AELCKNGFGPQFNGLMQPYDD 169
Query: 58 TDSLYTSAYSSYNNWASK 75
Y SYNNWA+K
Sbjct: 170 MYPGY-----SYNNWAAK 182
>gi|148233752|ref|NP_001080981.1| pituitary homeobox 1 [Xenopus laevis]
gi|6851371|gb|AAF29531.1|AF217647_1 pituitary homeobox gene 1 paired-like homeodomain transcription
factor [Xenopus laevis]
gi|213624932|gb|AAI69446.1| Pituitary homeobox gene 1 paired-likehomeodomain transcription
factor [Xenopus laevis]
gi|213625070|gb|AAI69749.1| Pitx1 protein [Xenopus laevis]
gi|213626444|gb|AAI69444.1| Pituitary homeobox gene 1 paired-likehomeodomain transcription
factor [Xenopus laevis]
gi|213626626|gb|AAI69747.1| Pitx1 protein [Xenopus laevis]
Length = 305
Score = 74.7 bits (182), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/90 (51%), Positives = 55/90 (61%), Gaps = 20/90 (22%)
Query: 1 MGELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDF-KNGFSTQFNGLMQT 54
M E +A+W RVRVWFKNRRAKWRKRERN +D KNG+ QF+GLMQ
Sbjct: 107 MREEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQ-------MDLCKNGYVPQFSGLMQP 159
Query: 55 FPDTDSLYTSAYSSYNNWASK--VPSPLGT 82
+ D +Y A YNNWA+K P+PL T
Sbjct: 160 Y---DEMY--AGYPYNNWATKSLTPAPLST 184
>gi|281494554|gb|ADA72029.1| PitxA, partial [Lethenteron camtschaticum]
Length = 187
Score = 74.7 bits (182), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 44/78 (56%), Positives = 48/78 (61%), Gaps = 16/78 (20%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRERN A KNGF QFNGLMQ + D
Sbjct: 22 EEIAVWTNLTEARVRVWFKNRRAKWRKRERNQH------AELCKNGFGPQFNGLMQPYDD 75
Query: 58 TDSLYTSAYSSYNNWASK 75
S Y SYNNWA+K
Sbjct: 76 MYSGY-----SYNNWAAK 88
>gi|338722603|ref|XP_003364573.1| PREDICTED: pituitary homeobox 2 [Equus caballus]
gi|338722605|ref|XP_003364574.1| PREDICTED: pituitary homeobox 2 [Equus caballus]
Length = 317
Score = 74.7 bits (182), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 47/78 (60%), Gaps = 16/78 (20%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRERN A KNGF QFNGLMQ + D
Sbjct: 116 EEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQ------AELCKNGFGPQFNGLMQPYDD 169
Query: 58 TDSLYTSAYSSYNNWASK 75
Y SYNNWA+K
Sbjct: 170 MYPGY-----SYNNWAAK 182
>gi|395851310|ref|XP_003798205.1| PREDICTED: pituitary homeobox 2 isoform 3 [Otolemur garnettii]
Length = 317
Score = 74.7 bits (182), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 47/78 (60%), Gaps = 16/78 (20%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRERN A KNGF QFNGLMQ + D
Sbjct: 116 EEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQ------AELCKNGFGPQFNGLMQPYDD 169
Query: 58 TDSLYTSAYSSYNNWASK 75
Y SYNNWA+K
Sbjct: 170 MYPGY-----SYNNWAAK 182
>gi|197210933|gb|ACH48392.1| Pitx2 [Maylandia zebra]
Length = 199
Score = 74.7 bits (182), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 47/78 (60%), Gaps = 16/78 (20%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRERN A KNGF QFNGLMQ + D
Sbjct: 26 EEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQ------AELCKNGFGPQFNGLMQPYDD 79
Query: 58 TDSLYTSAYSSYNNWASK 75
YT YNNWA+K
Sbjct: 80 MYPSYT-----YNNWAAK 92
>gi|55926080|ref|NP_001007500.1| paired-like homeodomain 1 [Xenopus (Silurana) tropicalis]
gi|51258792|gb|AAH79936.1| paired-like homeodomain 1 [Xenopus (Silurana) tropicalis]
Length = 305
Score = 74.7 bits (182), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/90 (51%), Positives = 55/90 (61%), Gaps = 20/90 (22%)
Query: 1 MGELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDF-KNGFSTQFNGLMQT 54
M E +A+W RVRVWFKNRRAKWRKRERN +D KNG+ QF+GLMQ
Sbjct: 107 MREEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQ-------MDLCKNGYVPQFSGLMQP 159
Query: 55 FPDTDSLYTSAYSSYNNWASK--VPSPLGT 82
+ D +Y A YNNWA+K P+PL T
Sbjct: 160 Y---DEMY--AGYPYNNWATKSLTPAPLST 184
>gi|148539550|ref|NP_001091900.1| pituitary homeobox 1 [Xenopus laevis]
gi|10798738|emb|CAC12834.1| Pitx1 protein [Xenopus laevis]
Length = 305
Score = 74.7 bits (182), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/90 (51%), Positives = 55/90 (61%), Gaps = 20/90 (22%)
Query: 1 MGELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDF-KNGFSTQFNGLMQT 54
M E +A+W RVRVWFKNRRAKWRKRERN +D KNG+ QF+GLMQ
Sbjct: 107 MREEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQ-------MDLCKNGYVPQFSGLMQP 159
Query: 55 FPDTDSLYTSAYSSYNNWASK--VPSPLGT 82
+ D +Y A YNNWA+K P+PL T
Sbjct: 160 Y---DEMY--AGYPYNNWATKSLTPAPLST 184
>gi|410957007|ref|XP_003985126.1| PREDICTED: pituitary homeobox 2 isoform 3 [Felis catus]
Length = 317
Score = 74.7 bits (182), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 47/78 (60%), Gaps = 16/78 (20%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRERN A KNGF QFNGLMQ + D
Sbjct: 116 EEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQ------AELCKNGFGPQFNGLMQPYDD 169
Query: 58 TDSLYTSAYSSYNNWASK 75
Y SYNNWA+K
Sbjct: 170 MYPGY-----SYNNWAAK 182
>gi|410957005|ref|XP_003985125.1| PREDICTED: pituitary homeobox 2 isoform 2 [Felis catus]
Length = 332
Score = 74.7 bits (182), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 47/78 (60%), Gaps = 16/78 (20%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRERN A KNGF QFNGLMQ + D
Sbjct: 131 EEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQ------AELCKNGFGPQFNGLMQPYDD 184
Query: 58 TDSLYTSAYSSYNNWASK 75
Y SYNNWA+K
Sbjct: 185 MYPGY-----SYNNWAAK 197
>gi|354504451|ref|XP_003514289.1| PREDICTED: pituitary homeobox 2-like isoform 2 [Cricetulus griseus]
Length = 315
Score = 74.7 bits (182), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 47/78 (60%), Gaps = 16/78 (20%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRERN A KNGF QFNGLMQ + D
Sbjct: 116 EEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQ------AELCKNGFGPQFNGLMQPYDD 169
Query: 58 TDSLYTSAYSSYNNWASK 75
Y SYNNWA+K
Sbjct: 170 MYPGY-----SYNNWAAK 182
>gi|291401268|ref|XP_002717161.1| PREDICTED: paired-like homeodomain 1 isoform 1 [Oryctolagus
cuniculus]
Length = 317
Score = 74.7 bits (182), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 47/78 (60%), Gaps = 16/78 (20%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRERN A KNGF QFNGLMQ + D
Sbjct: 116 EEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQ------AELCKNGFGPQFNGLMQPYDD 169
Query: 58 TDSLYTSAYSSYNNWASK 75
Y SYNNWA+K
Sbjct: 170 MYPGY-----SYNNWAAK 182
>gi|284930233|gb|ABN48541.2| transcription factor Pitx2 I [Cyprinus carpio]
Length = 275
Score = 74.7 bits (182), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 47/78 (60%), Gaps = 16/78 (20%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRERN A KNGF QFNGLMQ + D
Sbjct: 34 EEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQ------AELCKNGFGPQFNGLMQPYDD 87
Query: 58 TDSLYTSAYSSYNNWASK 75
YT YNNWA+K
Sbjct: 88 MYPSYT-----YNNWAAK 100
>gi|172046402|emb|CAP91067.1| Pitx2cbeta [Mus musculus]
Length = 290
Score = 74.7 bits (182), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 47/78 (60%), Gaps = 16/78 (20%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRERN A KNGF QFNGLMQ + D
Sbjct: 89 EEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQ------AELCKNGFGPQFNGLMQPYDD 142
Query: 58 TDSLYTSAYSSYNNWASK 75
Y SYNNWA+K
Sbjct: 143 MYPGY-----SYNNWAAK 155
>gi|74002160|ref|XP_863661.1| PREDICTED: pituitary homeobox 2 isoform 3 [Canis lupus familiaris]
gi|301764280|ref|XP_002917558.1| PREDICTED: pituitary homeobox 2-like isoform 1 [Ailuropoda
melanoleuca]
gi|345795854|ref|XP_003434086.1| PREDICTED: pituitary homeobox 2 [Canis lupus familiaris]
Length = 317
Score = 74.7 bits (182), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 47/78 (60%), Gaps = 16/78 (20%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRERN A KNGF QFNGLMQ + D
Sbjct: 116 EEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQ------AELCKNGFGPQFNGLMQPYDD 169
Query: 58 TDSLYTSAYSSYNNWASK 75
Y SYNNWA+K
Sbjct: 170 MYPGY-----SYNNWAAK 182
>gi|403275548|ref|XP_003929502.1| PREDICTED: pituitary homeobox 2 isoform 2 [Saimiri boliviensis
boliviensis]
gi|403275552|ref|XP_003929504.1| PREDICTED: pituitary homeobox 2 isoform 4 [Saimiri boliviensis
boliviensis]
gi|426231271|ref|XP_004009663.1| PREDICTED: pituitary homeobox 2 isoform 2 [Ovis aries]
Length = 317
Score = 74.7 bits (182), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 47/78 (60%), Gaps = 16/78 (20%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRERN A KNGF QFNGLMQ + D
Sbjct: 116 EEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQ------AELCKNGFGPQFNGLMQPYDD 169
Query: 58 TDSLYTSAYSSYNNWASK 75
Y SYNNWA+K
Sbjct: 170 MYPGY-----SYNNWAAK 182
>gi|109075372|ref|XP_001090922.1| PREDICTED: pituitary homeobox 2-like isoform 1 [Macaca mulatta]
gi|109075374|ref|XP_001091045.1| PREDICTED: pituitary homeobox 2-like isoform 2 [Macaca mulatta]
Length = 317
Score = 74.7 bits (182), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 47/78 (60%), Gaps = 16/78 (20%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRERN A KNGF QFNGLMQ + D
Sbjct: 116 EEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQ------AELCKNGFGPQFNGLMQPYDD 169
Query: 58 TDSLYTSAYSSYNNWASK 75
Y SYNNWA+K
Sbjct: 170 MYPGY-----SYNNWAAK 182
>gi|17380175|sp|Q9W751.1|PITX1_XENLA RecName: Full=Pituitary homeobox 1; AltName: Full=Homeobox protein
PITX1; Short=X-PITX-1; Short=xPitx1; AltName:
Full=Paired-like homeodomain transcription factor 1
gi|5566001|gb|AAD45292.1|AF155206_1 homeodomain transcription factor Pitx-1 [Xenopus laevis]
Length = 305
Score = 74.7 bits (182), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/90 (51%), Positives = 55/90 (61%), Gaps = 20/90 (22%)
Query: 1 MGELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDF-KNGFSTQFNGLMQT 54
M E +A+W RVRVWFKNRRAKWRKRERN +D KNG+ QF+GLMQ
Sbjct: 107 MREEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQ-------MDLCKNGYVPQFSGLMQP 159
Query: 55 FPDTDSLYTSAYSSYNNWASK--VPSPLGT 82
+ D +Y A YNNWA+K P+PL T
Sbjct: 160 Y---DEMY--AGYPYNNWATKSLTPAPLST 184
>gi|346986283|ref|NP_001231299.1| pituitary homeobox 1 [Sus scrofa]
gi|336092211|gb|AEI00729.1| paired-like homeodomain 1 [Sus scrofa]
Length = 314
Score = 74.7 bits (182), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/90 (50%), Positives = 56/90 (62%), Gaps = 19/90 (21%)
Query: 1 MGELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDF-KNGFSTQFNGLMQT 54
M E +A+W RVRVWFKNRRAKWRKRERN +D K G+ QF+GL+Q
Sbjct: 118 MREEIAVWTNLTEPRVRVWFKNRRAKWRKRERNQQ-------LDLCKGGYVPQFSGLVQP 170
Query: 55 FPDTDSLYTSAYSSYNNWASK--VPSPLGT 82
+ D +Y + Y SYNNWA+K P+PL T
Sbjct: 171 YED---VYAAGY-SYNNWAAKSLAPAPLST 196
>gi|348575063|ref|XP_003473309.1| PREDICTED: pituitary homeobox 1-like [Cavia porcellus]
Length = 309
Score = 74.7 bits (182), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/90 (50%), Positives = 56/90 (62%), Gaps = 19/90 (21%)
Query: 1 MGELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDF-KNGFSTQFNGLMQT 54
M E +A+W RVRVWFKNRRAKWRKRERN +D K G+ QF+GL+Q
Sbjct: 113 MREEIAVWTNLTEPRVRVWFKNRRAKWRKRERNQQ-------LDLCKGGYVPQFSGLVQP 165
Query: 55 FPDTDSLYTSAYSSYNNWASK--VPSPLGT 82
+ D +Y + Y SYNNWA+K P+PL T
Sbjct: 166 YED---VYAAGY-SYNNWAAKSLAPAPLST 191
>gi|149025925|gb|EDL82168.1| paired-like homeodomain transcription factor 2, isoform CRA_a
[Rattus norvegicus]
Length = 317
Score = 74.7 bits (182), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 47/78 (60%), Gaps = 16/78 (20%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRERN A KNGF QFNGLMQ + D
Sbjct: 116 EEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQ------AELCKNGFGPQFNGLMQPYDD 169
Query: 58 TDSLYTSAYSSYNNWASK 75
Y SYNNWA+K
Sbjct: 170 MYPGY-----SYNNWAAK 182
>gi|4512222|dbj|BAA75248.1| Brx1b homeoprotein [Mus musculus]
Length = 317
Score = 74.7 bits (182), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 47/78 (60%), Gaps = 16/78 (20%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRERN A KNGF QFNGLMQ + D
Sbjct: 116 EEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQ------AELCKNGFGPQFNGLMQPYDD 169
Query: 58 TDSLYTSAYSSYNNWASK 75
Y SYNNWA+K
Sbjct: 170 MYPGY-----SYNNWAAK 182
>gi|30841039|ref|NP_035228.2| pituitary homeobox 2 isoform b [Mus musculus]
gi|6174908|sp|P97474.2|PITX2_MOUSE RecName: Full=Pituitary homeobox 2; AltName: Full=ALL1-responsive
protein ARP1; AltName: Full=BRX1 homeoprotein; AltName:
Full=Homeobox protein PITX2; AltName:
Full=Orthodenticle-like homeobox 2; AltName:
Full=Paired-like homeodomain transcription factor 2;
AltName: Full=Paired-like homeodomain transcription
factor Munc 30; AltName: Full=Solurshin
gi|1930006|gb|AAC53119.1| pituitary homeobox 2 isoform b [Mus musculus]
gi|148680297|gb|EDL12244.1| paired-like homeodomain transcription factor 2, isoform CRA_a [Mus
musculus]
Length = 317
Score = 74.7 bits (182), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 47/78 (60%), Gaps = 16/78 (20%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRERN A KNGF QFNGLMQ + D
Sbjct: 116 EEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQ------AELCKNGFGPQFNGLMQPYDD 169
Query: 58 TDSLYTSAYSSYNNWASK 75
Y SYNNWA+K
Sbjct: 170 MYPGY-----SYNNWAAK 182
>gi|417398828|gb|JAA46447.1| Putative transcription factor ptx1 [Desmodus rotundus]
Length = 314
Score = 74.7 bits (182), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/90 (50%), Positives = 56/90 (62%), Gaps = 19/90 (21%)
Query: 1 MGELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDF-KNGFSTQFNGLMQT 54
M E +A+W RVRVWFKNRRAKWRKRERN +D K G+ QF+GL+Q
Sbjct: 118 MREEIAVWTNLTEPRVRVWFKNRRAKWRKRERNQQ-------LDLCKGGYVPQFSGLVQP 170
Query: 55 FPDTDSLYTSAYSSYNNWASK--VPSPLGT 82
+ D +Y + Y SYNNWA+K P+PL T
Sbjct: 171 YED---VYAAGY-SYNNWAAKSLAPAPLST 196
>gi|330340407|ref|NP_001193364.1| pituitary homeobox 2 [Sus scrofa]
gi|292806711|gb|ADE42485.1| paired-like homeodomain transcription factor 2c [Sus scrofa]
Length = 326
Score = 74.7 bits (182), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 47/78 (60%), Gaps = 16/78 (20%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRERN A KNGF QFNGLMQ + D
Sbjct: 125 EEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQ------AELCKNGFGPQFNGLMQPYDD 178
Query: 58 TDSLYTSAYSSYNNWASK 75
Y SYNNWA+K
Sbjct: 179 MYPGY-----SYNNWAAK 191
>gi|410957013|ref|XP_003985129.1| PREDICTED: pituitary homeobox 2 isoform 6 [Felis catus]
Length = 304
Score = 74.7 bits (182), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 47/78 (60%), Gaps = 16/78 (20%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRERN A KNGF QFNGLMQ + D
Sbjct: 103 EEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQ------AELCKNGFGPQFNGLMQPYDD 156
Query: 58 TDSLYTSAYSSYNNWASK 75
Y SYNNWA+K
Sbjct: 157 MYPGY-----SYNNWAAK 169
>gi|354504453|ref|XP_003514290.1| PREDICTED: pituitary homeobox 2-like isoform 3 [Cricetulus griseus]
Length = 302
Score = 74.7 bits (182), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 47/78 (60%), Gaps = 16/78 (20%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRERN A KNGF QFNGLMQ + D
Sbjct: 103 EEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQ------AELCKNGFGPQFNGLMQPYDD 156
Query: 58 TDSLYTSAYSSYNNWASK 75
Y SYNNWA+K
Sbjct: 157 MYPGY-----SYNNWAAK 169
>gi|390460514|ref|XP_003732496.1| PREDICTED: pituitary homeobox 2 [Callithrix jacchus]
gi|390460517|ref|XP_003732497.1| PREDICTED: pituitary homeobox 2 [Callithrix jacchus]
Length = 317
Score = 74.7 bits (182), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 47/78 (60%), Gaps = 16/78 (20%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRERN A KNGF QFNGLMQ + D
Sbjct: 116 EEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQ------AELCKNGFGPQFNGLMQPYDD 169
Query: 58 TDSLYTSAYSSYNNWASK 75
Y SYNNWA+K
Sbjct: 170 MYPGY-----SYNNWAAK 182
>gi|24234708|ref|NP_700475.1| pituitary homeobox 2 isoform b [Homo sapiens]
gi|324710992|ref|NP_001191326.1| pituitary homeobox 2 isoform b [Homo sapiens]
gi|324710994|ref|NP_001191327.1| pituitary homeobox 2 isoform b [Homo sapiens]
gi|397519871|ref|XP_003830076.1| PREDICTED: pituitary homeobox 2 isoform 2 [Pan paniscus]
gi|6174907|sp|Q99697.2|PITX2_HUMAN RecName: Full=Pituitary homeobox 2; AltName: Full=ALL1-responsive
protein ARP1; AltName: Full=Homeobox protein PITX2;
AltName: Full=Paired-like homeodomain transcription
factor 2; AltName: Full=RIEG bicoid-related homeobox
transcription factor; AltName: Full=Solurshin
gi|3078009|gb|AAC39717.1| ALL1 responsive protein ARP1b [Homo sapiens]
gi|119626667|gb|EAX06262.1| paired-like homeodomain transcription factor 2, isoform CRA_a [Homo
sapiens]
gi|193785429|dbj|BAG54582.1| unnamed protein product [Homo sapiens]
gi|410342051|gb|JAA39972.1| paired-like homeodomain 2 [Pan troglodytes]
Length = 317
Score = 74.7 bits (182), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 47/78 (60%), Gaps = 16/78 (20%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRERN A KNGF QFNGLMQ + D
Sbjct: 116 EEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQ------AELCKNGFGPQFNGLMQPYDD 169
Query: 58 TDSLYTSAYSSYNNWASK 75
Y SYNNWA+K
Sbjct: 170 MYPGY-----SYNNWAAK 182
>gi|170962918|gb|ACB40929.1| paired-like homeodomain transcription factor 3 [Carassius
auratus]
Length = 179
Score = 74.7 bits (182), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 44/74 (59%), Positives = 46/74 (62%), Gaps = 13/74 (17%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPDTDSLYTSAYSSY 69
RVRVWFKNRRAKWRKRERN A KNGF QFNGLMQ + D S Y SY
Sbjct: 12 RVRVWFKNRRAKWRKRERNQQ------AELCKNGFGAQFNGLMQPYDDMYSGY-----SY 60
Query: 70 NNWASK--VPSPLG 81
NNWA+K SPL
Sbjct: 61 NNWATKSLASSPLS 74
>gi|355750199|gb|EHH54537.1| hypothetical protein EGM_15398, partial [Macaca fascicularis]
Length = 273
Score = 74.7 bits (182), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/90 (50%), Positives = 56/90 (62%), Gaps = 19/90 (21%)
Query: 1 MGELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDF-KNGFSTQFNGLMQT 54
M E +A+W RVRVWFKNRRAKWRKRERN +D K G+ QF+GL+Q
Sbjct: 77 MREEIAVWTNLTEPRVRVWFKNRRAKWRKRERNQQ-------LDLCKGGYVPQFSGLVQP 129
Query: 55 FPDTDSLYTSAYSSYNNWASK--VPSPLGT 82
+ D +Y + Y SYNNWA+K P+PL T
Sbjct: 130 YED---VYAAGY-SYNNWAAKSLAPAPLST 155
>gi|355691618|gb|EHH26803.1| hypothetical protein EGK_16870, partial [Macaca mulatta]
Length = 272
Score = 74.7 bits (182), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/90 (50%), Positives = 56/90 (62%), Gaps = 19/90 (21%)
Query: 1 MGELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDF-KNGFSTQFNGLMQT 54
M E +A+W RVRVWFKNRRAKWRKRERN +D K G+ QF+GL+Q
Sbjct: 76 MREEIAVWTNLTEPRVRVWFKNRRAKWRKRERNQQ-------LDLCKGGYVPQFSGLVQP 128
Query: 55 FPDTDSLYTSAYSSYNNWASK--VPSPLGT 82
+ D +Y + Y SYNNWA+K P+PL T
Sbjct: 129 YED---VYAAGY-SYNNWAAKSLAPAPLST 154
>gi|402870242|ref|XP_003899144.1| PREDICTED: pituitary homeobox 2 isoform 1 [Papio anubis]
gi|402870248|ref|XP_003899147.1| PREDICTED: pituitary homeobox 2 isoform 4 [Papio anubis]
Length = 317
Score = 74.7 bits (182), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 47/78 (60%), Gaps = 16/78 (20%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRERN A KNGF QFNGLMQ + D
Sbjct: 116 EEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQ------AELCKNGFGPQFNGLMQPYDD 169
Query: 58 TDSLYTSAYSSYNNWASK 75
Y SYNNWA+K
Sbjct: 170 MYPGY-----SYNNWAAK 182
>gi|395817540|ref|XP_003782227.1| PREDICTED: pituitary homeobox 1 [Otolemur garnettii]
Length = 314
Score = 74.3 bits (181), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/90 (50%), Positives = 56/90 (62%), Gaps = 19/90 (21%)
Query: 1 MGELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDF-KNGFSTQFNGLMQT 54
M E +A+W RVRVWFKNRRAKWRKRERN +D K G+ QF+GL+Q
Sbjct: 118 MREEIAVWTNLTEPRVRVWFKNRRAKWRKRERNQQ-------LDLCKGGYVPQFSGLVQP 170
Query: 55 FPDTDSLYTSAYSSYNNWASK--VPSPLGT 82
+ D +Y + Y SYNNWA+K P+PL T
Sbjct: 171 YED---VYAAGY-SYNNWAAKSLAPAPLST 196
>gi|296192770|ref|XP_002744217.1| PREDICTED: pituitary homeobox 1 isoform 2 [Callithrix jacchus]
Length = 314
Score = 74.3 bits (181), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/90 (50%), Positives = 56/90 (62%), Gaps = 19/90 (21%)
Query: 1 MGELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDF-KNGFSTQFNGLMQT 54
M E +A+W RVRVWFKNRRAKWRKRERN +D K G+ QF+GL+Q
Sbjct: 118 MREEIAVWTNLTEPRVRVWFKNRRAKWRKRERNQQ-------LDLCKGGYVPQFSGLVQP 170
Query: 55 FPDTDSLYTSAYSSYNNWASK--VPSPLGT 82
+ D +Y + Y SYNNWA+K P+PL T
Sbjct: 171 YED---VYAAGY-SYNNWAAKSLAPAPLST 196
>gi|1498310|gb|AAC52716.1| POTX [Mus musculus]
Length = 315
Score = 74.3 bits (181), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/90 (50%), Positives = 56/90 (62%), Gaps = 19/90 (21%)
Query: 1 MGELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDF-KNGFSTQFNGLMQT 54
M E +A+W RVRVWFKNRRAKWRKRERN +D K G+ QF+GL+Q
Sbjct: 119 MREEIAVWTNLTEPRVRVWFKNRRAKWRKRERNQQ-------LDLCKGGYVPQFSGLVQP 171
Query: 55 FPDTDSLYTSAYSSYNNWASK--VPSPLGT 82
+ D +Y + Y SYNNWA+K P+PL T
Sbjct: 172 YED---VYAAGY-SYNNWAAKSLAPAPLST 197
>gi|172046400|emb|CAP79627.1| paired-like homeodomain transcription factor 2, isoform 2b2 [Mus
musculus]
Length = 304
Score = 74.3 bits (181), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 47/78 (60%), Gaps = 16/78 (20%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRERN A KNGF QFNGLMQ + D
Sbjct: 103 EEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQ------AELCKNGFGPQFNGLMQPYDD 156
Query: 58 TDSLYTSAYSSYNNWASK 75
Y SYNNWA+K
Sbjct: 157 MYPGY-----SYNNWAAK 169
>gi|426231275|ref|XP_004009665.1| PREDICTED: pituitary homeobox 2 isoform 4 [Ovis aries]
Length = 304
Score = 74.3 bits (181), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 47/78 (60%), Gaps = 16/78 (20%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRERN A KNGF QFNGLMQ + D
Sbjct: 103 EEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQ------AELCKNGFGPQFNGLMQPYDD 156
Query: 58 TDSLYTSAYSSYNNWASK 75
Y SYNNWA+K
Sbjct: 157 MYPGY-----SYNNWAAK 169
>gi|13277554|gb|AAH03685.1| PITX1 protein [Homo sapiens]
gi|158254702|dbj|BAF83324.1| unnamed protein product [Homo sapiens]
gi|325463757|gb|ADZ15649.1| paired-like homeodomain 1 [synthetic construct]
Length = 314
Score = 74.3 bits (181), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/90 (50%), Positives = 56/90 (62%), Gaps = 19/90 (21%)
Query: 1 MGELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDF-KNGFSTQFNGLMQT 54
M E +A+W RVRVWFKNRRAKWRKRERN +D K G+ QF+GL+Q
Sbjct: 118 MREEIAVWTNLTEPRVRVWFKNRRAKWRKRERNQQ-------LDLCKGGYVPQFSGLVQP 170
Query: 55 FPDTDSLYTSAYSSYNNWASK--VPSPLGT 82
+ D +Y + Y SYNNWA+K P+PL T
Sbjct: 171 YED---VYAAGY-SYNNWAAKSLAPAPLST 196
>gi|6755070|ref|NP_035227.1| pituitary homeobox 1 [Mus musculus]
gi|6174906|sp|P70314.2|PITX1_MOUSE RecName: Full=Pituitary homeobox 1; AltName:
Full=Hindlimb-expressed homeobox protein backfoot;
AltName: Full=Homeobox protein P-OTX; AltName:
Full=Homeobox protein PITX1; AltName: Full=Paired-like
homeodomain transcription factor 1; AltName:
Full=Pituitary OTX-related factor
gi|1616805|gb|AAB16860.1| Ptx1 [Mus musculus]
gi|15215190|gb|AAH12696.1| Paired-like homeodomain transcription factor 1 [Mus musculus]
gi|74210934|dbj|BAE25071.1| unnamed protein product [Mus musculus]
gi|148709283|gb|EDL41229.1| paired-like homeodomain transcription factor 1, isoform CRA_a [Mus
musculus]
gi|148709284|gb|EDL41230.1| paired-like homeodomain transcription factor 1, isoform CRA_a [Mus
musculus]
Length = 315
Score = 74.3 bits (181), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/90 (50%), Positives = 56/90 (62%), Gaps = 19/90 (21%)
Query: 1 MGELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDF-KNGFSTQFNGLMQT 54
M E +A+W RVRVWFKNRRAKWRKRERN +D K G+ QF+GL+Q
Sbjct: 119 MREEIAVWTNLTEPRVRVWFKNRRAKWRKRERNQQ-------LDLCKGGYVPQFSGLVQP 171
Query: 55 FPDTDSLYTSAYSSYNNWASK--VPSPLGT 82
+ D +Y + Y SYNNWA+K P+PL T
Sbjct: 172 YED---VYAAGY-SYNNWAAKSLAPAPLST 197
>gi|397518446|ref|XP_003829398.1| PREDICTED: pituitary homeobox 1 [Pan paniscus]
Length = 351
Score = 74.3 bits (181), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 45/90 (50%), Positives = 56/90 (62%), Gaps = 19/90 (21%)
Query: 1 MGELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDF-KNGFSTQFNGLMQT 54
M E +A+W RVRVWFKNRRAKWRKRERN +D K G+ QF+GL+Q
Sbjct: 155 MREEIAVWTNLTEPRVRVWFKNRRAKWRKRERNQQ-------LDLCKGGYVPQFSGLVQP 207
Query: 55 FPDTDSLYTSAYSSYNNWASK--VPSPLGT 82
+ D +Y + Y SYNNWA+K P+PL T
Sbjct: 208 YED---VYAAGY-SYNNWAAKSLAPAPLST 233
>gi|109078669|ref|XP_001110089.1| PREDICTED: pituitary homeobox 1 isoform 1 [Macaca mulatta]
gi|297295105|ref|XP_002804564.1| PREDICTED: pituitary homeobox 1 [Macaca mulatta]
gi|402872535|ref|XP_003900165.1| PREDICTED: pituitary homeobox 1 [Papio anubis]
Length = 314
Score = 74.3 bits (181), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 45/90 (50%), Positives = 56/90 (62%), Gaps = 19/90 (21%)
Query: 1 MGELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDF-KNGFSTQFNGLMQT 54
M E +A+W RVRVWFKNRRAKWRKRERN +D K G+ QF+GL+Q
Sbjct: 118 MREEIAVWTNLTEPRVRVWFKNRRAKWRKRERNQQ-------LDLCKGGYVPQFSGLVQP 170
Query: 55 FPDTDSLYTSAYSSYNNWASK--VPSPLGT 82
+ D +Y + Y SYNNWA+K P+PL T
Sbjct: 171 YED---VYAAGY-SYNNWAAKSLAPAPLST 196
>gi|152963644|ref|NP_002644.4| pituitary homeobox 1 [Homo sapiens]
gi|114601770|ref|XP_001168135.1| PREDICTED: pituitary homeobox 1 isoform 1 [Pan troglodytes]
gi|426350020|ref|XP_004042581.1| PREDICTED: pituitary homeobox 1 [Gorilla gorilla gorilla]
gi|108935922|sp|P78337.2|PITX1_HUMAN RecName: Full=Pituitary homeobox 1; AltName:
Full=Hindlimb-expressed homeobox protein backfoot;
AltName: Full=Homeobox protein PITX1; AltName:
Full=Paired-like homeodomain transcription factor 1
gi|2291093|gb|AAB65251.1| paired-like homeodomain transcription factor [Homo sapiens]
gi|14495617|gb|AAH09412.1| Paired-like homeodomain 1 [Homo sapiens]
gi|119582630|gb|EAW62226.1| paired-like homeodomain transcription factor 1, isoform CRA_a [Homo
sapiens]
gi|119582631|gb|EAW62227.1| paired-like homeodomain transcription factor 1, isoform CRA_a [Homo
sapiens]
gi|167773483|gb|ABZ92176.1| paired-like homeodomain 1 [synthetic construct]
gi|208966990|dbj|BAG73509.1| paired-like homeodomain 1 [synthetic construct]
Length = 314
Score = 74.3 bits (181), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 45/90 (50%), Positives = 56/90 (62%), Gaps = 19/90 (21%)
Query: 1 MGELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDF-KNGFSTQFNGLMQT 54
M E +A+W RVRVWFKNRRAKWRKRERN +D K G+ QF+GL+Q
Sbjct: 118 MREEIAVWTNLTEPRVRVWFKNRRAKWRKRERNQQ-------LDLCKGGYVPQFSGLVQP 170
Query: 55 FPDTDSLYTSAYSSYNNWASK--VPSPLGT 82
+ D +Y + Y SYNNWA+K P+PL T
Sbjct: 171 YED---VYAAGY-SYNNWAAKSLAPAPLST 196
>gi|148232934|ref|NP_001079212.1| pituitary homeobox 3 [Xenopus laevis]
gi|18203019|sp|Q9I8K3.1|PITX3_XENLA RecName: Full=Pituitary homeobox 3; AltName: Full=Homeobox protein
PITX3; Short=XPitx-3; Short=xPitx3; AltName:
Full=Paired-like homeodomain transcription factor 3
gi|9716650|gb|AAF97592.1|AF265671_1 paired-like homeodomain transcription factor Pitx3 [Xenopus laevis]
Length = 292
Score = 74.3 bits (181), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 46/86 (53%), Positives = 50/86 (58%), Gaps = 18/86 (20%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRERN A KN F QFNGLMQ + D
Sbjct: 91 EEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQ------AELCKNSFGAQFNGLMQPYDD 144
Query: 58 TDSLYTSAYSSYNNWASK--VPSPLG 81
S Y SYNNWA+K SPL
Sbjct: 145 MYSGY-----SYNNWATKGLATSPLS 165
>gi|397519875|ref|XP_003830078.1| PREDICTED: pituitary homeobox 2 isoform 4 [Pan paniscus]
Length = 304
Score = 74.3 bits (181), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 47/78 (60%), Gaps = 16/78 (20%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRERN A KNGF QFNGLMQ + D
Sbjct: 103 EEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQ------AELCKNGFGPQFNGLMQPYDD 156
Query: 58 TDSLYTSAYSSYNNWASK 75
Y SYNNWA+K
Sbjct: 157 MYPGY-----SYNNWAAK 169
>gi|297676018|ref|XP_002815946.1| PREDICTED: pituitary homeobox 1 [Pongo abelii]
Length = 313
Score = 74.3 bits (181), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 45/90 (50%), Positives = 56/90 (62%), Gaps = 19/90 (21%)
Query: 1 MGELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDF-KNGFSTQFNGLMQT 54
M E +A+W RVRVWFKNRRAKWRKRERN +D K G+ QF+GL+Q
Sbjct: 117 MREEIAVWTNLTEPRVRVWFKNRRAKWRKRERNQQ-------LDLCKGGYVPQFSGLVQP 169
Query: 55 FPDTDSLYTSAYSSYNNWASK--VPSPLGT 82
+ D +Y + Y SYNNWA+K P+PL T
Sbjct: 170 YED---VYAAGY-SYNNWAAKSLAPAPLST 195
>gi|73970768|ref|XP_850773.1| PREDICTED: pituitary homeobox 1 isoform 3 [Canis lupus familiaris]
Length = 313
Score = 74.3 bits (181), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 45/90 (50%), Positives = 56/90 (62%), Gaps = 19/90 (21%)
Query: 1 MGELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDF-KNGFSTQFNGLMQT 54
M E +A+W RVRVWFKNRRAKWRKRERN +D K G+ QF+GL+Q
Sbjct: 117 MREEIAVWTNLTEPRVRVWFKNRRAKWRKRERNQQ-------LDLCKGGYVPQFSGLVQP 169
Query: 55 FPDTDSLYTSAYSSYNNWASK--VPSPLGT 82
+ D +Y + Y SYNNWA+K P+PL T
Sbjct: 170 YED---VYAAGY-SYNNWAAKSLAPAPLST 195
>gi|5668951|gb|AAD46097.1|AF077092_1 pituitary homeobox protein 2 [Gallus gallus]
Length = 271
Score = 74.3 bits (181), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 47/78 (60%), Gaps = 16/78 (20%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRERN A KNGF QFNGLMQ + D
Sbjct: 70 EEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQ------AELCKNGFGPQFNGLMQPYDD 123
Query: 58 TDSLYTSAYSSYNNWASK 75
Y SYNNWA+K
Sbjct: 124 MYPGY-----SYNNWAAK 136
>gi|1870671|gb|AAC51126.1| hindlimb expressed homeobox protein backfoot [Homo sapiens]
Length = 314
Score = 74.3 bits (181), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 45/90 (50%), Positives = 56/90 (62%), Gaps = 19/90 (21%)
Query: 1 MGELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDF-KNGFSTQFNGLMQT 54
M E +A+W RVRVWFKNRRAKWRKRERN +D K G+ QF+GL+Q
Sbjct: 118 MREEIAVWTNLTEPRVRVWFKNRRAKWRKRERNQQ-------LDLCKGGYVPQFSGLVQP 170
Query: 55 FPDTDSLYTSAYSSYNNWASK--VPSPLGT 82
+ D +Y + Y SYNNWA+K P+PL T
Sbjct: 171 YED---VYAAGY-SYNNWAAKSLAPAPLST 196
>gi|301612605|ref|XP_002935807.1| PREDICTED: pituitary homeobox 3-like [Xenopus (Silurana)
tropicalis]
Length = 292
Score = 74.3 bits (181), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 47/78 (60%), Gaps = 16/78 (20%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRERN A KN F QFNGLMQ + D
Sbjct: 91 EEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQ------AELCKNSFGAQFNGLMQPYDD 144
Query: 58 TDSLYTSAYSSYNNWASK 75
S Y SYNNWA+K
Sbjct: 145 MYSGY-----SYNNWATK 157
>gi|194208516|ref|XP_001916416.1| PREDICTED: pituitary homeobox 2 isoform 1 [Equus caballus]
gi|338722607|ref|XP_003364575.1| PREDICTED: pituitary homeobox 2 [Equus caballus]
gi|395851308|ref|XP_003798204.1| PREDICTED: pituitary homeobox 2 isoform 2 [Otolemur garnettii]
Length = 271
Score = 74.3 bits (181), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 47/78 (60%), Gaps = 16/78 (20%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRERN A KNGF QFNGLMQ + D
Sbjct: 70 EEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQ------AELCKNGFGPQFNGLMQPYDD 123
Query: 58 TDSLYTSAYSSYNNWASK 75
Y SYNNWA+K
Sbjct: 124 MYPGY-----SYNNWAAK 136
>gi|148238060|ref|NP_001082023.1| paired-like homeodomain 3 [Xenopus laevis]
gi|10242336|gb|AAG15383.1|AF297713_1 homeodomain transcription factor Pitx-3 [Xenopus laevis]
gi|213623914|gb|AAI70394.1| Pitx3 protein [Xenopus laevis]
gi|213625259|gb|AAI70198.1| Paired-like homeodomain transcription factor 3 [Xenopus laevis]
gi|213625342|gb|AAI70392.1| Paired-like homeodomain transcription factor 3 [Xenopus laevis]
gi|213626819|gb|AAI70172.1| Paired-like homeodomain transcription factor 3 [Xenopus laevis]
Length = 292
Score = 74.3 bits (181), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 47/78 (60%), Gaps = 16/78 (20%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRERN A KN F QFNGLMQ + D
Sbjct: 91 EEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQ------AELCKNSFGAQFNGLMQPYDD 144
Query: 58 TDSLYTSAYSSYNNWASK 75
S Y SYNNWA+K
Sbjct: 145 MYSGY-----SYNNWATK 157
>gi|410957011|ref|XP_003985128.1| PREDICTED: pituitary homeobox 2 isoform 5 [Felis catus]
Length = 286
Score = 74.3 bits (181), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 47/78 (60%), Gaps = 16/78 (20%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRERN A KNGF QFNGLMQ + D
Sbjct: 85 EEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQ------AELCKNGFGPQFNGLMQPYDD 138
Query: 58 TDSLYTSAYSSYNNWASK 75
Y SYNNWA+K
Sbjct: 139 MYPGY-----SYNNWAAK 151
>gi|354504455|ref|XP_003514291.1| PREDICTED: pituitary homeobox 2-like isoform 4 [Cricetulus griseus]
Length = 269
Score = 74.3 bits (181), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 47/78 (60%), Gaps = 16/78 (20%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRERN A KNGF QFNGLMQ + D
Sbjct: 70 EEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQ------AELCKNGFGPQFNGLMQPYDD 123
Query: 58 TDSLYTSAYSSYNNWASK 75
Y SYNNWA+K
Sbjct: 124 MYPGY-----SYNNWAAK 136
>gi|354471883|ref|XP_003498170.1| PREDICTED: pituitary homeobox 1-like [Cricetulus griseus]
Length = 293
Score = 74.3 bits (181), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 45/90 (50%), Positives = 56/90 (62%), Gaps = 19/90 (21%)
Query: 1 MGELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDF-KNGFSTQFNGLMQT 54
M E +A+W RVRVWFKNRRAKWRKRERN +D K G+ QF+GL+Q
Sbjct: 148 MREEIAVWTNLTEPRVRVWFKNRRAKWRKRERNQQ-------LDLCKGGYVPQFSGLVQP 200
Query: 55 FPDTDSLYTSAYSSYNNWASK--VPSPLGT 82
+ D +Y + Y SYNNWA+K P+PL T
Sbjct: 201 YED---VYAAGY-SYNNWAAKSLAPAPLST 226
>gi|395542232|ref|XP_003773037.1| PREDICTED: pituitary homeobox 2 isoform 1 [Sarcophilus harrisii]
Length = 317
Score = 74.3 bits (181), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 47/78 (60%), Gaps = 16/78 (20%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRERN A KNGF QFNGLMQ + D
Sbjct: 116 EEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQ------AELCKNGFGPQFNGLMQPYDD 169
Query: 58 TDSLYTSAYSSYNNWASK 75
Y SYNNWA+K
Sbjct: 170 MYPGY-----SYNNWAAK 182
>gi|1737167|gb|AAC16257.1| solurshin [Homo sapiens]
Length = 271
Score = 74.3 bits (181), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 47/78 (60%), Gaps = 16/78 (20%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRERN A KNGF QFNGLMQ + D
Sbjct: 70 EEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQ------AELCKNGFGPQFNGLMQPYDD 123
Query: 58 TDSLYTSAYSSYNNWASK 75
Y SYNNWA+K
Sbjct: 124 MYPGY-----SYNNWAAK 136
>gi|24234711|ref|NP_700476.1| pituitary homeobox 2 isoform a [Homo sapiens]
gi|324710996|ref|NP_001191328.1| pituitary homeobox 2 isoform a [Homo sapiens]
gi|296195753|ref|XP_002745525.1| PREDICTED: pituitary homeobox 2 isoform 3 [Callithrix jacchus]
gi|397519873|ref|XP_003830077.1| PREDICTED: pituitary homeobox 2 isoform 3 [Pan paniscus]
gi|403275546|ref|XP_003929501.1| PREDICTED: pituitary homeobox 2 isoform 1 [Saimiri boliviensis
boliviensis]
gi|426231273|ref|XP_004009664.1| PREDICTED: pituitary homeobox 2 isoform 3 [Ovis aries]
gi|3078007|gb|AAC39716.1| ALL1 responsive protein ARP1a [Homo sapiens]
gi|76780065|gb|AAI06011.1| Paired-like homeodomain 2 [Homo sapiens]
gi|119626669|gb|EAX06264.1| paired-like homeodomain transcription factor 2, isoform CRA_c [Homo
sapiens]
gi|410342055|gb|JAA39974.1| paired-like homeodomain 2 [Pan troglodytes]
Length = 271
Score = 74.3 bits (181), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 47/78 (60%), Gaps = 16/78 (20%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRERN A KNGF QFNGLMQ + D
Sbjct: 70 EEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQ------AELCKNGFGPQFNGLMQPYDD 123
Query: 58 TDSLYTSAYSSYNNWASK 75
Y SYNNWA+K
Sbjct: 124 MYPGY-----SYNNWAAK 136
>gi|410957009|ref|XP_003985127.1| PREDICTED: pituitary homeobox 2 isoform 4 [Felis catus]
Length = 271
Score = 74.3 bits (181), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 47/78 (60%), Gaps = 16/78 (20%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRERN A KNGF QFNGLMQ + D
Sbjct: 70 EEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQ------AELCKNGFGPQFNGLMQPYDD 123
Query: 58 TDSLYTSAYSSYNNWASK 75
Y SYNNWA+K
Sbjct: 124 MYPGY-----SYNNWAAK 136
>gi|13183093|gb|AAK15048.1| paired-like homeodomain transcription factor 2 [Homo sapiens]
Length = 271
Score = 74.3 bits (181), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 47/78 (60%), Gaps = 16/78 (20%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRERN A KNGF QFNGLMQ + D
Sbjct: 70 EEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQ------AELCKNGFGPQFNGLMQPYDD 123
Query: 58 TDSLYTSAYSSYNNWASK 75
Y SYNNWA+K
Sbjct: 124 MYPGY-----SYNNWAAK 136
>gi|210049953|dbj|BAG80694.1| homeodomain transcription factor Pitx2 [Neoceratodus forsteri]
Length = 202
Score = 74.3 bits (181), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 47/78 (60%), Gaps = 16/78 (20%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRERN A KNGF QFNGLMQ + D
Sbjct: 1 EEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQ------AELCKNGFGPQFNGLMQPYDD 54
Query: 58 TDSLYTSAYSSYNNWASK 75
Y SYNNWA+K
Sbjct: 55 MYPGY-----SYNNWAAK 67
>gi|9506975|ref|NP_062207.1| pituitary homeobox 2 isoform 2 [Rattus norvegicus]
gi|109948277|ref|NP_001035969.1| pituitary homeobox 2 isoform a [Mus musculus]
gi|109075378|ref|XP_001091165.1| PREDICTED: pituitary homeobox 2-like isoform 3 [Macaca mulatta]
gi|402870244|ref|XP_003899145.1| PREDICTED: pituitary homeobox 2 isoform 2 [Papio anubis]
gi|1724116|gb|AAB38505.1| orthodenticle-like homeobox 2 [Mus musculus]
gi|3078013|gb|AAC40086.1| ALL1 responsive protein ARP1a [Mus musculus]
gi|3834392|gb|AAC70909.1| homeobox protein [Rattus norvegicus]
gi|5706496|emb|CAB52284.1| homeodomain protein Ptx2B [Rattus norvegicus]
gi|148680298|gb|EDL12245.1| paired-like homeodomain transcription factor 2, isoform CRA_b [Mus
musculus]
gi|149025926|gb|EDL82169.1| paired-like homeodomain transcription factor 2, isoform CRA_b
[Rattus norvegicus]
Length = 271
Score = 74.3 bits (181), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 47/78 (60%), Gaps = 16/78 (20%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRERN A KNGF QFNGLMQ + D
Sbjct: 70 EEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQ------AELCKNGFGPQFNGLMQPYDD 123
Query: 58 TDSLYTSAYSSYNNWASK 75
Y SYNNWA+K
Sbjct: 124 MYPGY-----SYNNWAAK 136
>gi|1737173|gb|AAB38864.1| solurshin, partial [Mus musculus]
Length = 255
Score = 74.3 bits (181), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 47/78 (60%), Gaps = 16/78 (20%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRERN A KNGF QFNGLMQ + D
Sbjct: 54 EEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQ------AELCKNGFGPQFNGLMQPYDD 107
Query: 58 TDSLYTSAYSSYNNWASK 75
Y SYNNWA+K
Sbjct: 108 MYPGY-----SYNNWAAK 120
>gi|345795856|ref|XP_003434087.1| PREDICTED: pituitary homeobox 2 [Canis lupus familiaris]
gi|345795858|ref|XP_003434088.1| PREDICTED: pituitary homeobox 2 [Canis lupus familiaris]
Length = 271
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 47/78 (60%), Gaps = 16/78 (20%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRERN A KNGF QFNGLMQ + D
Sbjct: 70 EEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQ------AELCKNGFGPQFNGLMQPYDD 123
Query: 58 TDSLYTSAYSSYNNWASK 75
Y SYNNWA+K
Sbjct: 124 MYPGY-----SYNNWAAK 136
>gi|158256614|dbj|BAF84280.1| unnamed protein product [Homo sapiens]
Length = 271
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 47/78 (60%), Gaps = 16/78 (20%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRERN A KNGF QFNGLMQ + D
Sbjct: 70 EEIAVWTNLTETRVRVWFKNRRAKWRKRERNQQ------AELCKNGFGPQFNGLMQPYDD 123
Query: 58 TDSLYTSAYSSYNNWASK 75
Y SYNNWA+K
Sbjct: 124 MYPGY-----SYNNWAAK 136
>gi|194219914|ref|XP_001502776.2| PREDICTED: LOW QUALITY PROTEIN: pituitary homeobox 1-like [Equus
caballus]
Length = 290
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/90 (50%), Positives = 56/90 (62%), Gaps = 19/90 (21%)
Query: 1 MGELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDF-KNGFSTQFNGLMQT 54
M E +A+W RVRVWFKNRRAKWRKRERN +D K G+ QF+GL+Q
Sbjct: 94 MREEIAVWTNLTEPRVRVWFKNRRAKWRKRERNQQ-------LDLCKGGYVPQFSGLVQP 146
Query: 55 FPDTDSLYTSAYSSYNNWASK--VPSPLGT 82
+ D +Y + Y SYNNWA+K P+PL T
Sbjct: 147 YED---VYAAGY-SYNNWAAKSLAPAPLST 172
>gi|1930008|gb|AAC53120.1| pituitary homeobox 2 isoform a [Mus musculus]
Length = 271
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/78 (53%), Positives = 46/78 (58%), Gaps = 16/78 (20%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRERN KNGF QFNGLMQ + D
Sbjct: 70 EEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQXELC------KNGFGPQFNGLMQPYDD 123
Query: 58 TDSLYTSAYSSYNNWASK 75
Y SYNNWA+K
Sbjct: 124 MYPGY-----SYNNWAAK 136
>gi|94039302|dbj|BAE93507.1| paired-like homeodomain transcription factor 1 [Bos taurus]
Length = 178
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/90 (50%), Positives = 56/90 (62%), Gaps = 19/90 (21%)
Query: 1 MGELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDF-KNGFSTQFNGLMQT 54
M E +A+W RVRVWFKNRRAKWRKRERN +D K G+ QF+GL+Q
Sbjct: 10 MREEIAVWTNLTEPRVRVWFKNRRAKWRKRERNQQ-------LDLCKGGYVPQFSGLVQP 62
Query: 55 FPDTDSLYTSAYSSYNNWASK--VPSPLGT 82
+ D +Y + Y SYNNWA+K P+PL T
Sbjct: 63 Y---DDVYAAGY-SYNNWAAKSLAPAPLST 88
>gi|444517223|gb|ELV11418.1| Pituitary homeobox 1 [Tupaia chinensis]
Length = 319
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/90 (50%), Positives = 56/90 (62%), Gaps = 19/90 (21%)
Query: 1 MGELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDF-KNGFSTQFNGLMQT 54
M E +A+W RVRVWFKNRRAKWRKRERN +D K G+ QF+GL+Q
Sbjct: 123 MREEIAVWTNLTEPRVRVWFKNRRAKWRKRERNQQ-------LDLCKGGYVPQFSGLVQP 175
Query: 55 FPDTDSLYTSAYSSYNNWASK--VPSPLGT 82
+ D +Y + Y SYNNWA+K P+PL T
Sbjct: 176 YED---VYAAGY-SYNNWAAKSLAPAPLST 201
>gi|46401362|gb|AAS92266.1| Pitx-2 [Oncorhynchus mykiss]
Length = 170
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 47/78 (60%), Gaps = 16/78 (20%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRERN A KNGF QFNGLMQ + D
Sbjct: 19 EEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQ------AELCKNGFGPQFNGLMQPYDD 72
Query: 58 TDSLYTSAYSSYNNWASK 75
YT YNNWA+K
Sbjct: 73 MYPSYT-----YNNWAAK 85
>gi|25137559|gb|AAN73037.1| Pitx2 [Oryctolagus cuniculus]
Length = 213
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 47/78 (60%), Gaps = 16/78 (20%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRERN A KNGF QFNGLMQ + D
Sbjct: 40 EEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQ------AELCKNGFGPQFNGLMQPYDD 93
Query: 58 TDSLYTSAYSSYNNWASK 75
Y SYNNWA+K
Sbjct: 94 MYPGY-----SYNNWAAK 106
>gi|110748620|gb|ABG89863.1| Pitx2 splice variant a [Astyanax mexicanus]
Length = 260
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/82 (52%), Positives = 50/82 (60%), Gaps = 15/82 (18%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRERN A K GF QFNGL+Q + D
Sbjct: 67 EEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQ------AELCKGGFGAQFNGLVQPYED 120
Query: 58 TDSLYTSAYSSYNNWASKVPSP 79
+Y S Y YNNWA+K +P
Sbjct: 121 ---MYAS-YPPYNNWAAKSLAP 138
>gi|57545777|gb|AAW51825.1| PITX2 [Paracentrotus lividus]
Length = 318
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/74 (59%), Positives = 49/74 (66%), Gaps = 12/74 (16%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPDTDSLYTSAYSSY 69
RVRVWFKNRRAKWRKRERN ++ + KNG FNGLMQ F D LY S Y SY
Sbjct: 131 RVRVWFKNRRAKWRKRERNQLH-------ELKNGLGAGFNGLMQPF--DDGLY-SGY-SY 179
Query: 70 NNW-ASKVPSPLGT 82
NNW A+K + LGT
Sbjct: 180 NNWAAAKTANHLGT 193
>gi|72008575|ref|XP_782344.1| PREDICTED: pituitary homeobox x-like [Strongylocentrotus
purpuratus]
Length = 314
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/74 (59%), Positives = 49/74 (66%), Gaps = 12/74 (16%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPDTDSLYTSAYSSY 69
RVRVWFKNRRAKWRKRERN ++ + KNG FNGLMQ F D LY S Y SY
Sbjct: 127 RVRVWFKNRRAKWRKRERNQLH-------ELKNGLGAGFNGLMQPF--DDGLY-SGY-SY 175
Query: 70 NNW-ASKVPSPLGT 82
NNW A+K + LGT
Sbjct: 176 NNWAAAKTANHLGT 189
>gi|374533824|gb|AEZ53825.1| paired-like homeodomain 2, partial [Spea multiplicata]
gi|374533826|gb|AEZ53826.1| paired-like homeodomain 2, partial [Scaphiopus couchii]
gi|374533828|gb|AEZ53827.1| paired-like homeodomain 2, partial [Scaphiopus holbrookii]
Length = 195
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 47/78 (60%), Gaps = 16/78 (20%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRERN A KNGF QFNGLMQ + D
Sbjct: 23 EEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQ------AELCKNGFGPQFNGLMQPYDD 76
Query: 58 TDSLYTSAYSSYNNWASK 75
Y SYNNWA+K
Sbjct: 77 MYPGY-----SYNNWAAK 89
>gi|267844835|ref|NP_001161156.1| pituitary homeobox 1 [Gallus gallus]
gi|267844837|ref|NP_001161157.1| pituitary homeobox 1 [Gallus gallus]
gi|267844839|ref|NP_001161158.1| pituitary homeobox 1 [Gallus gallus]
Length = 302
Score = 72.8 bits (177), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 53/90 (58%), Gaps = 20/90 (22%)
Query: 1 MGELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDF-KNGFSTQFNGLMQT 54
M E +A+W RVRVWFKNRRAKWRKRERN +D KNG+ QF+GLMQ
Sbjct: 107 MREEIAVWTNLTEPRVRVWFKNRRAKWRKRERNQQ-------MDLCKNGYVPQFSGLMQP 159
Query: 55 FPDTDSLYTSAYSSYNNWASK--VPSPLGT 82
+ D + Y YN WA+K P+PL T
Sbjct: 160 YDDMYAGYP-----YNKWATKSLTPAPLST 184
>gi|145309208|gb|ABP57806.1| homeodomain transcription factor 2 isoform c [Rattus norvegicus]
Length = 152
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 47/78 (60%), Gaps = 16/78 (20%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRERN A KNGF QFNGLMQ + D
Sbjct: 69 EEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQ------AELCKNGFGPQFNGLMQPYDD 122
Query: 58 TDSLYTSAYSSYNNWASK 75
Y SYNNWA+K
Sbjct: 123 MYPGY-----SYNNWAAK 135
>gi|344277314|ref|XP_003410447.1| PREDICTED: LOW QUALITY PROTEIN: pituitary homeobox 2-like
[Loxodonta africana]
Length = 326
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/78 (53%), Positives = 45/78 (57%), Gaps = 16/78 (20%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRERN A KNGF QFNGLMQ + D
Sbjct: 125 EEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQ------AELCKNGFGPQFNGLMQPYDD 178
Query: 58 TDSLYTSAYSSYNNWASK 75
Y SYN WA K
Sbjct: 179 MYPGY-----SYNXWAPK 191
>gi|327276787|ref|XP_003223149.1| PREDICTED: pituitary homeobox 3-like [Anolis carolinensis]
Length = 286
Score = 72.4 bits (176), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 48/78 (61%), Gaps = 16/78 (20%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRERN A KN F QFNGLMQ +
Sbjct: 91 EEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQ------AELCKNSFGAQFNGLMQPY-- 142
Query: 58 TDSLYTSAYSSYNNWASK 75
D +Y Y SYNNWA+K
Sbjct: 143 -DEMY-GGY-SYNNWATK 157
>gi|351708465|gb|EHB11384.1| Pituitary homeobox 1, partial [Heterocephalus glaber]
Length = 288
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/83 (50%), Positives = 52/83 (62%), Gaps = 17/83 (20%)
Query: 1 MGELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDF-KNGFSTQFNGLMQT 54
M E +A+W RVRVWFKNRRAKWRKRERN +D K G+ QF+GL+Q
Sbjct: 96 MREEIAVWTNLTEPRVRVWFKNRRAKWRKRERNQQ-------LDLCKGGYVPQFSGLVQP 148
Query: 55 FPDTDSLYTSAYSSYNNWASKVP 77
+ D +Y + Y SYNNWA+K P
Sbjct: 149 YED---VYAAGY-SYNNWAAKRP 167
>gi|47207934|emb|CAF90371.1| unnamed protein product [Tetraodon nigroviridis]
Length = 316
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/80 (55%), Positives = 48/80 (60%), Gaps = 17/80 (21%)
Query: 7 LWL----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPDTDSLY 62
WL +V+VWFKNRRAKWRKRERN A KNGF QFNGLMQ + D S Y
Sbjct: 118 CWLAGDQQVQVWFKNRRAKWRKRERNQQ------AELCKNGFGAQFNGLMQPYDDVYSGY 171
Query: 63 TSAYSSYNNWASK--VPSPL 80
SYNNWA+K SPL
Sbjct: 172 -----SYNNWAAKGLASSPL 186
>gi|342837528|dbj|BAK57345.1| pituitary homeobox 2 [Scyliorhinus torazame]
Length = 338
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/78 (53%), Positives = 47/78 (60%), Gaps = 16/78 (20%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRERN A K+GF QFNGLMQ + D
Sbjct: 137 EEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQ------AELCKSGFGPQFNGLMQPYDD 190
Query: 58 TDSLYTSAYSSYNNWASK 75
Y SYNNWA+K
Sbjct: 191 MYPGY-----SYNNWAAK 203
>gi|1870673|gb|AAC53059.1| hindlimb expressed homeobox protein backfoot [Mus musculus]
Length = 183
Score = 71.6 bits (174), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 50/76 (65%), Gaps = 14/76 (18%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVDF-KNGFSTQFNGLMQTFPDTDSLYTSAYSS 68
RVRVWFKNRRAKWRKRERN +D K G+ QF+GL+Q + D +Y + Y S
Sbjct: 1 RVRVWFKNRRAKWRKRERNQQ-------LDLCKGGYVPQFSGLVQPYED---VYAAGY-S 49
Query: 69 YNNWASK--VPSPLGT 82
YNNWA+K P+PL T
Sbjct: 50 YNNWAAKSLAPAPLST 65
>gi|390354222|ref|XP_797336.3| PREDICTED: pituitary homeobox 3-like [Strongylocentrotus
purpuratus]
Length = 433
Score = 71.6 bits (174), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/89 (50%), Positives = 54/89 (60%), Gaps = 18/89 (20%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFST-QFNGLMQTFP 56
E +A W RVR+WFKNRRAKWRKRERN +N + KNG FNGLMQ F
Sbjct: 228 EEIAAWTSLTEPRVRIWFKNRRAKWRKRERNQLN-------ELKNGLGQHHFNGLMQPF- 279
Query: 57 DTDSLYTSAYSSYNNWASKVPS-PLGTIG 84
+ LY S Y SY+NWAS P+ P+ + G
Sbjct: 280 -DEGLY-SGY-SYSNWASAKPTAPMSSKG 305
>gi|92098338|gb|AAI15353.1| Paired-like homeodomain transcription factor 1 [Danio rerio]
Length = 281
Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 43/88 (48%), Positives = 51/88 (57%), Gaps = 20/88 (22%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDF-KNGFSTQFNGLMQTFP 56
E +A+W RVRVWFKNRRAKWRKRERN +D KN + QF+GLMQ +
Sbjct: 85 EEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQ-------MDLCKNSYLPQFSGLMQPYD 137
Query: 57 DTDSLYTSAYSSYNNWASK--VPSPLGT 82
D YT YNNW +K P+PL T
Sbjct: 138 DVYPTYT-----YNNWTNKGLTPAPLST 160
>gi|165973350|ref|NP_001035436.3| pituitary homeobox 1 [Danio rerio]
gi|158380249|gb|ABW37421.1| paired-like homeodomain transcription factor 1 [Danio rerio]
Length = 285
Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 43/88 (48%), Positives = 51/88 (57%), Gaps = 20/88 (22%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDF-KNGFSTQFNGLMQTFP 56
E +A+W RVRVWFKNRRAKWRKRERN +D KN + QF+GLMQ +
Sbjct: 89 EEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQ-------MDLCKNSYLPQFSGLMQPYD 141
Query: 57 DTDSLYTSAYSSYNNWASK--VPSPLGT 82
D YT YNNW +K P+PL T
Sbjct: 142 DVYPTYT-----YNNWTNKGLTPAPLST 164
>gi|374533822|gb|AEZ53824.1| paired-like homeodomain 2, partial [Spea bombifrons]
Length = 250
Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/78 (53%), Positives = 46/78 (58%), Gaps = 16/78 (20%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRERN A K GF QFNGLMQ + D
Sbjct: 67 EEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQ------AELCKXGFGPQFNGLMQPYDD 120
Query: 58 TDSLYTSAYSSYNNWASK 75
Y SYNNWA+K
Sbjct: 121 MYPGY-----SYNNWAAK 133
>gi|348527908|ref|XP_003451461.1| PREDICTED: pituitary homeobox 1-like [Oreochromis niloticus]
Length = 378
Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 43/88 (48%), Positives = 51/88 (57%), Gaps = 20/88 (22%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDF-KNGFSTQFNGLMQTFP 56
E +A+W RVRVWFKNRRAKWRKRERN +D KN + QF+GLMQ +
Sbjct: 182 EEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQ-------MDLCKNSYLPQFSGLMQPYD 234
Query: 57 DTDSLYTSAYSSYNNWASK--VPSPLGT 82
D YT YNNW +K P+PL T
Sbjct: 235 DMYPAYT-----YNNWTNKGLTPAPLST 257
>gi|183207891|gb|ACC59092.1| paired-like homeodomain transcription factor 1 [Danio rerio]
Length = 285
Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 43/88 (48%), Positives = 51/88 (57%), Gaps = 20/88 (22%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDF-KNGFSTQFNGLMQTFP 56
E +A+W RVRVWFKNRRAKWRKRERN +D KN + QF+GLMQ +
Sbjct: 89 EEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQ-------MDLCKNSYLPQFSGLMQPYD 141
Query: 57 DTDSLYTSAYSSYNNWASK--VPSPLGT 82
D YT YNNW +K P+PL T
Sbjct: 142 DVYPTYT-----YNNWTNKGLTPAPLST 164
>gi|410915108|ref|XP_003971029.1| PREDICTED: pituitary homeobox 1-like isoform 1 [Takifugu rubripes]
Length = 315
Score = 70.9 bits (172), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 43/88 (48%), Positives = 51/88 (57%), Gaps = 20/88 (22%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDF-KNGFSTQFNGLMQTFP 56
E +A+W RVRVWFKNRRAKWRKRERN +D KN + QF+GLMQ +
Sbjct: 119 EEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQ-------MDLCKNSYLPQFSGLMQPYE 171
Query: 57 DTDSLYTSAYSSYNNWASK--VPSPLGT 82
D YT YNNW +K P+PL T
Sbjct: 172 DMYPAYT-----YNNWTNKGLTPAPLST 194
>gi|432895659|ref|XP_004076098.1| PREDICTED: pituitary homeobox 1-like isoform 1 [Oryzias latipes]
Length = 316
Score = 70.9 bits (172), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 43/88 (48%), Positives = 51/88 (57%), Gaps = 20/88 (22%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDF-KNGFSTQFNGLMQTFP 56
E +A+W RVRVWFKNRRAKWRKRERN +D KN + QF+GLMQ +
Sbjct: 120 EEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQ-------MDLCKNSYLPQFSGLMQPYD 172
Query: 57 DTDSLYTSAYSSYNNWASK--VPSPLGT 82
D YT YNNW +K P+PL T
Sbjct: 173 DMYPAYT-----YNNWTNKGLAPAPLST 195
>gi|185135897|ref|NP_001117184.1| paired-like homeodomain transcription factor 1alpha-like [Salmo
salar]
gi|158380235|gb|ABW37414.1| paired-like homeodomain transcription factor 1alpha [Salmo salar]
Length = 265
Score = 70.9 bits (172), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 42/87 (48%), Positives = 49/87 (56%), Gaps = 18/87 (20%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRERN KN + QF+GLMQ + D
Sbjct: 69 EEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQTDLC------KNSYLPQFSGLMQPYDD 122
Query: 58 TDSLYTSAYSSYNNWASK--VPSPLGT 82
YT YNNW +K P+PL T
Sbjct: 123 MYPAYT-----YNNWTNKGLTPAPLST 144
>gi|410915110|ref|XP_003971030.1| PREDICTED: pituitary homeobox 1-like isoform 2 [Takifugu rubripes]
Length = 265
Score = 70.9 bits (172), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 43/88 (48%), Positives = 51/88 (57%), Gaps = 20/88 (22%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDF-KNGFSTQFNGLMQTFP 56
E +A+W RVRVWFKNRRAKWRKRERN +D KN + QF+GLMQ +
Sbjct: 69 EEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQ-------MDLCKNSYLPQFSGLMQPYE 121
Query: 57 DTDSLYTSAYSSYNNWASK--VPSPLGT 82
D YT YNNW +K P+PL T
Sbjct: 122 DMYPAYT-----YNNWTNKGLTPAPLST 144
>gi|49660016|gb|AAT68296.1| Pitx3 [Danio rerio]
Length = 293
Score = 70.9 bits (172), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 42/78 (53%), Positives = 46/78 (58%), Gaps = 16/78 (20%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVW KNRRAKWRK ERN A KNGF QFNGLMQ + D
Sbjct: 91 EEIAVWTNLTEARVRVWVKNRRAKWRKLERNQQ------AELCKNGFGAQFNGLMQPYDD 144
Query: 58 TDSLYTSAYSSYNNWASK 75
S Y SYNNWA+K
Sbjct: 145 MYSGY-----SYNNWATK 157
>gi|185132206|ref|NP_001117153.1| paired-like homeodomain transcription factor 1alpha [Salmo salar]
gi|158380231|gb|ABW37412.1| paired-like homeodomain transcription factor 1alpha [Salmo salar]
Length = 316
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/88 (48%), Positives = 51/88 (57%), Gaps = 20/88 (22%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDF-KNGFSTQFNGLMQTFP 56
E +A+W RVRVWFKNRRAKWRKRERN +D KN + QF+GLMQ +
Sbjct: 120 EEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQ-------MDLCKNSYLPQFSGLMQPYD 172
Query: 57 DTDSLYTSAYSSYNNWASK--VPSPLGT 82
D YT YNNW +K P+PL T
Sbjct: 173 DMYPAYT-----YNNWTNKGLTPAPLST 195
>gi|432895661|ref|XP_004076099.1| PREDICTED: pituitary homeobox 1-like isoform 2 [Oryzias latipes]
Length = 265
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/88 (48%), Positives = 51/88 (57%), Gaps = 20/88 (22%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDF-KNGFSTQFNGLMQTFP 56
E +A+W RVRVWFKNRRAKWRKRERN +D KN + QF+GLMQ +
Sbjct: 69 EEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQ-------MDLCKNSYLPQFSGLMQPYD 121
Query: 57 DTDSLYTSAYSSYNNWASK--VPSPLGT 82
D YT YNNW +K P+PL T
Sbjct: 122 DMYPAYT-----YNNWTNKGLAPAPLST 144
>gi|47221758|emb|CAG08812.1| unnamed protein product [Tetraodon nigroviridis]
Length = 408
Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/88 (48%), Positives = 51/88 (57%), Gaps = 20/88 (22%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDF-KNGFSTQFNGLMQTFP 56
E +A+W RVRVWFKNRRAKWRKRERN +D KN + QF+GLMQ +
Sbjct: 119 EEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQ-------MDLCKNSYLPQFSGLMQPYD 171
Query: 57 DTDSLYTSAYSSYNNWASK--VPSPLGT 82
D YT YNNW +K P+PL T
Sbjct: 172 DMYPAYT-----YNNWTNKGLAPAPLST 194
>gi|410932191|ref|XP_003979477.1| PREDICTED: pituitary homeobox 3-like, partial [Takifugu rubripes]
Length = 188
Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/65 (58%), Positives = 43/65 (66%), Gaps = 11/65 (16%)
Query: 11 VRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPDTDSLYTSAYSSYN 70
++VWFKNRRAKWRKRERN A KNGF QFNGLMQ + D +YT SYN
Sbjct: 1 LQVWFKNRRAKWRKRERNQQ------AELCKNGFGAQFNGLMQPY---DDMYTGY--SYN 49
Query: 71 NWASK 75
NWA+K
Sbjct: 50 NWAAK 54
>gi|444524075|gb|ELV13712.1| Pituitary homeobox 2 [Tupaia chinensis]
Length = 315
Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 44/75 (58%), Gaps = 11/75 (14%)
Query: 1 MGELMALWLRVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPDTDS 60
+ + +L +VWFKNRRAKWRKRERN A KNGF QFNGLMQ + D
Sbjct: 117 VASVCSLARCPQVWFKNRRAKWRKRERNQQ------AELCKNGFGPQFNGLMQPYDDMYP 170
Query: 61 LYTSAYSSYNNWASK 75
Y SYNNWA+K
Sbjct: 171 GY-----SYNNWAAK 180
>gi|50363053|gb|AAT75269.1| pituitary homeobox transcription factor [Botryllus schlosseri]
Length = 233
Score = 68.6 bits (166), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/84 (53%), Positives = 51/84 (60%), Gaps = 19/84 (22%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E M+ W+ RVRVWFKNRRAKWRKRERN M VD+KN FNG+ P
Sbjct: 52 EDMSKWIGLSEQRVRVWFKNRRAKWRKRERNQM-------VDYKN---FHFNGINGILPY 101
Query: 58 TDSLYTSAYSSYNNWASKVPSPLG 81
DSLY YS+Y NW K+ SPLG
Sbjct: 102 EDSLY--GYSAY-NW-QKMASPLG 121
>gi|149598484|ref|XP_001515509.1| PREDICTED: pituitary homeobox 1-like [Ornithorhynchus anatinus]
Length = 231
Score = 68.2 bits (165), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/84 (50%), Positives = 51/84 (60%), Gaps = 17/84 (20%)
Query: 4 LMALWLR--VRVWFKNRRAKWRKRERNAMNAAAAAAVDF-KNGFSTQFNGLMQTFPDTDS 60
L+AL LR +VWFKNRRAKWRKRERN +D KNG+ QF+GLM + D +
Sbjct: 39 LLALSLRRPPQVWFKNRRAKWRKRERNQQ-------MDLCKNGYVPQFSGLMPPYEDVYA 91
Query: 61 LYTSAYSSYNNWASK--VPSPLGT 82
Y YNNWA+K P+PL T
Sbjct: 92 GYP-----YNNWAAKSLTPAPLST 110
>gi|344265522|ref|XP_003404833.1| PREDICTED: pituitary homeobox 1-like [Loxodonta africana]
Length = 292
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/82 (47%), Positives = 50/82 (60%), Gaps = 17/82 (20%)
Query: 1 MGELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDF-KNGFSTQFNGLMQT 54
M E +A+W RVRVWFKNRRAKWRKRERN +D K G+ QF+GL+Q
Sbjct: 118 MREEIAVWTNLTEPRVRVWFKNRRAKWRKRERNQQ-------LDLCKGGYVPQFSGLVQP 170
Query: 55 FPDTDSLYTSAYSSYNNWASKV 76
+ D +Y + Y SYNNW+ +
Sbjct: 171 YED---VYAAGY-SYNNWSGQA 188
>gi|351711061|gb|EHB13980.1| Pituitary homeobox 2 [Heterocephalus glaber]
Length = 220
Score = 67.8 bits (164), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 48/91 (52%), Gaps = 21/91 (23%)
Query: 12 RVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPDTDSLYTSAYSSYNN 71
VWFKNRRAKWRKRERN A KNGF QFNGLMQ + D Y SYNN
Sbjct: 33 EVWFKNRRAKWRKRERNQQ------AELCKNGFGPQFNGLMQPYDDVYPGY-----SYNN 81
Query: 72 WASKVPSP----------LGTIGVNDLGFQS 92
WA+K +P ++ VN L QS
Sbjct: 82 WAAKGLTPASLSSKSFPFFNSMNVNPLSSQS 112
>gi|38146911|gb|AAR11850.1| Pitx-2 [Gasterosteus aculeatus]
Length = 128
Score = 67.8 bits (164), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 41/78 (52%), Positives = 46/78 (58%), Gaps = 16/78 (20%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAK RKRERN A KNGF QFNGLMQ + D
Sbjct: 7 EEIAVWTNFTEARVRVWFKNRRAKLRKRERNQQ------AELCKNGFGPQFNGLMQPYED 60
Query: 58 TDSLYTSAYSSYNNWASK 75
YT YN+WA+K
Sbjct: 61 MYPSYT-----YNSWAAK 73
>gi|110826324|gb|ABH01131.1| Pitx1 splice variant a [Pungitius pungitius]
gi|110826328|gb|ABH01133.1| Pitx1 splice variant a [Pungitius pungitius]
Length = 324
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/88 (46%), Positives = 51/88 (57%), Gaps = 20/88 (22%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDF-KNGFSTQFNGLMQTFP 56
E +A+W RVRVWFKNRRAKWRKRERN +D K+ + QF+GLMQ +
Sbjct: 141 EEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQ-------MDLCKSSYLPQFSGLMQPYE 193
Query: 57 DTDSLYTSAYSSYNNWASK--VPSPLGT 82
D Y SYNNW +K P+PL +
Sbjct: 194 DMYPTY-----SYNNWPNKGLAPAPLSS 216
>gi|110826326|gb|ABH01132.1| Pitx1 splice variant b [Pungitius pungitius]
gi|110826330|gb|ABH01134.1| Pitx1 splice variant b [Pungitius pungitius]
Length = 276
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/88 (46%), Positives = 51/88 (57%), Gaps = 20/88 (22%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDF-KNGFSTQFNGLMQTFP 56
E +A+W RVRVWFKNRRAKWRKRERN +D K+ + QF+GLMQ +
Sbjct: 93 EEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQ-------MDLCKSSYLPQFSGLMQPYE 145
Query: 57 DTDSLYTSAYSSYNNWASK--VPSPLGT 82
D Y SYNNW +K P+PL +
Sbjct: 146 DMYPTY-----SYNNWPNKGLAPAPLSS 168
>gi|432117751|gb|ELK37904.1| Pituitary homeobox 1 [Myotis davidii]
Length = 661
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/74 (51%), Positives = 47/74 (63%), Gaps = 14/74 (18%)
Query: 12 RVWFKNRRAKWRKRERNAMNAAAAAAVDF-KNGFSTQFNGLMQTFPDTDSLYTSAYSSYN 70
VWFKNRRAKWRKRERN +D K G+ QF+GL+Q + D +Y + Y SYN
Sbjct: 91 EVWFKNRRAKWRKRERNQQ-------LDLCKGGYVPQFSGLVQPYED---VYAAGY-SYN 139
Query: 71 NWASK--VPSPLGT 82
NWA+K P+PL T
Sbjct: 140 NWAAKSLAPAPLST 153
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 36/62 (58%), Gaps = 14/62 (22%)
Query: 24 KRERNAMNAAAAAAVDF-KNGFSTQFNGLMQTFPDTDSLYTSAYSSYNNWASK--VPSPL 80
KRERN +D K G+ QF+GL+Q + D +Y + YS YNNWA+K P+PL
Sbjct: 215 KRERNQQ-------LDLCKGGYVPQFSGLVQPYED---VYAAGYS-YNNWAAKSLAPAPL 263
Query: 81 GT 82
T
Sbjct: 264 ST 265
>gi|326928703|ref|XP_003210515.1| PREDICTED: pituitary homeobox 1-like [Meleagris gallopavo]
Length = 286
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/74 (51%), Positives = 46/74 (62%), Gaps = 15/74 (20%)
Query: 12 RVWFKNRRAKWRKRERNAMNAAAAAAVDF-KNGFSTQFNGLMQTFPDTDSLYTSAYSSYN 70
+VWFKNRRAKWRKRERN +D KNG+ QF+GLMQ + D + Y YN
Sbjct: 107 QVWFKNRRAKWRKRERNQQ-------MDLCKNGYVPQFSGLMQPYDDMYAGYP-----YN 154
Query: 71 NWASK--VPSPLGT 82
NWA+K P+PL T
Sbjct: 155 NWATKSLTPAPLST 168
>gi|110826332|gb|ABH01135.1| Pitx1 splice variant a [Gasterosteus aculeatus]
gi|110826336|gb|ABH01137.1| Pitx1 splice variant a [Gasterosteus aculeatus]
gi|262091683|gb|ACY25276.1| pituitary homeobox 1 variant a [Gasterosteus aculeatus]
Length = 300
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/88 (46%), Positives = 51/88 (57%), Gaps = 20/88 (22%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDF-KNGFSTQFNGLMQTFP 56
E +A+W RVRVWFKNRRAKWRKRERN +D K+ + QF+GLMQ +
Sbjct: 116 EEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQ-------MDLCKSSYLPQFSGLMQPYE 168
Query: 57 DTDSLYTSAYSSYNNWASK--VPSPLGT 82
D Y SYNNW +K P+PL +
Sbjct: 169 DMYPTY-----SYNNWPNKGLAPAPLSS 191
>gi|46393908|gb|AAS91492.1| transcription factor [Gasterosteus aculeatus]
gi|262091684|gb|ACY25277.1| pituitary homeobox 1 variant b [Gasterosteus aculeatus]
Length = 283
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/88 (46%), Positives = 51/88 (57%), Gaps = 20/88 (22%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDF-KNGFSTQFNGLMQTFP 56
E +A+W RVRVWFKNRRAKWRKRERN +D K+ + QF+GLMQ +
Sbjct: 99 EEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQ-------MDLCKSSYLPQFSGLMQPYE 151
Query: 57 DTDSLYTSAYSSYNNWASK--VPSPLGT 82
D Y SYNNW +K P+PL +
Sbjct: 152 DMYPTY-----SYNNWPNKGLAPAPLSS 174
>gi|390407701|ref|NP_001254576.1| pituitary homeobox 1 [Gasterosteus aculeatus]
gi|110826334|gb|ABH01136.1| Pitx1 splice variant b [Gasterosteus aculeatus]
gi|110826338|gb|ABH01138.1| Pitx1 splice variant b [Gasterosteus aculeatus]
Length = 253
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/88 (46%), Positives = 51/88 (57%), Gaps = 20/88 (22%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDF-KNGFSTQFNGLMQTFP 56
E +A+W RVRVWFKNRRAKWRKRERN +D K+ + QF+GLMQ +
Sbjct: 69 EEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQ-------MDLCKSSYLPQFSGLMQPYE 121
Query: 57 DTDSLYTSAYSSYNNWASK--VPSPLGT 82
D Y SYNNW +K P+PL +
Sbjct: 122 DMYPTY-----SYNNWPNKGLAPAPLSS 144
>gi|431892642|gb|ELK03075.1| Pituitary homeobox 1, partial [Pteropus alecto]
Length = 257
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/90 (46%), Positives = 54/90 (60%), Gaps = 20/90 (22%)
Query: 1 MGELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDF-KNGFSTQFNGLMQT 54
M E +A+W RVRVWFKNRRAKWRKRERN +D K G+ QF+GL+Q
Sbjct: 62 MREEIAVWTNLTEPRVRVWFKNRRAKWRKRERNQQ-------LDLCKGGYVPQFSGLVQP 114
Query: 55 FPDTDSLYTSAYSSYNNWASK--VPSPLGT 82
+ D +Y + Y+ NWA+K P+PL T
Sbjct: 115 YED---VYAAGYNY--NWATKSLAPAPLST 139
>gi|3168620|gb|AAC17733.1| Bft [Homo sapiens]
Length = 180
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 47/73 (64%), Gaps = 14/73 (19%)
Query: 13 VWFKNRRAKWRKRERNAMNAAAAAAVDF-KNGFSTQFNGLMQTFPDTDSLYTSAYSSYNN 71
VWFKNRRAKWRKRERN +D K G+ QF+GL+Q + D +Y + Y SYNN
Sbjct: 1 VWFKNRRAKWRKRERNQQ-------LDLCKGGYVPQFSGLVQPYED---VYAAGY-SYNN 49
Query: 72 WASK--VPSPLGT 82
WA+K P+PL T
Sbjct: 50 WAAKSLAPAPLST 62
>gi|158380237|gb|ABW37415.1| paired-like homeodomain transcription factor 1beta [Salmo salar]
Length = 266
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/83 (46%), Positives = 48/83 (57%), Gaps = 18/83 (21%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDF-KNGFSTQFNGLMQTFP 56
E +A+W RVRVWFKNRRAKWRKRERN +D K+ + QF+GLMQ +
Sbjct: 69 EEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQ-------MDLCKSSYLPQFSGLMQPYD 121
Query: 57 DTDSLYTSAYSSYNNWASKVPSP 79
D YT YNNW +K +P
Sbjct: 122 DMYPAYT-----YNNWTNKGLTP 139
>gi|185133831|ref|NP_001117173.1| paired-like homeodomain transcription factor 1beta [Salmo salar]
gi|158380233|gb|ABW37413.1| paired-like homeodomain transcription factor 1beta [Salmo salar]
Length = 316
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/83 (46%), Positives = 48/83 (57%), Gaps = 18/83 (21%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDF-KNGFSTQFNGLMQTFP 56
E +A+W RVRVWFKNRRAKWRKRERN +D K+ + QF+GLMQ +
Sbjct: 119 EEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQ-------MDLCKSSYLPQFSGLMQPYD 171
Query: 57 DTDSLYTSAYSSYNNWASKVPSP 79
D YT YNNW +K +P
Sbjct: 172 DMYPAYT-----YNNWTNKGLTP 189
>gi|38146909|gb|AAR11849.1| Pitx-1 [Gasterosteus aculeatus]
Length = 173
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 51/88 (57%), Gaps = 20/88 (22%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDF-KNGFSTQFNGLMQTFP 56
E +A+W RVRVWFKNRRAKWRKRERN +D K+ + +F+GLMQ +
Sbjct: 23 EEIAVWTNLTEARVRVWFKNRRAKWRKRERNLQ-------MDLCKSSYLPKFSGLMQPYE 75
Query: 57 DTDSLYTSAYSSYNNWASK--VPSPLGT 82
D Y SYNNW +K P+PL +
Sbjct: 76 DMYPTY-----SYNNWPNKGLAPAPLSS 98
>gi|399153233|dbj|BAM35169.1| homeodomain transcription factor [Halocynthia roretzi]
gi|399153235|dbj|BAM35170.1| homeodomain transcription factor [Halocynthia roretzi]
Length = 608
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/73 (53%), Positives = 44/73 (60%), Gaps = 17/73 (23%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPDTDSLYTSAYSSY 69
RVRVWFKNRRAKWRKRERN M D+KN FNG+M P D +Y Y +Y
Sbjct: 439 RVRVWFKNRRAKWRKRERNQM-------TDYKN---FPFNGIM---PGYDEMY--GYPTY 483
Query: 70 NNWASKVPSPLGT 82
NW K+ SPL T
Sbjct: 484 -NWP-KMASPLST 494
>gi|87299449|dbj|BAE79557.1| pituitary homeobox [Halocynthia roretzi]
Length = 281
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/73 (53%), Positives = 44/73 (60%), Gaps = 17/73 (23%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPDTDSLYTSAYSSY 69
RVRVWFKNRRAKWRKRERN M D+KN FNG+M P D +Y Y +Y
Sbjct: 112 RVRVWFKNRRAKWRKRERNQM-------TDYKN---FPFNGIM---PGYDEMY--GYPTY 156
Query: 70 NNWASKVPSPLGT 82
NW K+ SPL T
Sbjct: 157 -NWP-KMASPLST 167
>gi|358444374|gb|AEU12491.1| Pitx1, partial [Pleurodeles waltl]
Length = 72
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 38/62 (61%), Gaps = 11/62 (17%)
Query: 1 MGELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTF 55
M E +A+W RVRVWFKNRRAKWRKRERN KNG+ QF+GLMQ +
Sbjct: 13 MREEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQMDLC------KNGYVPQFSGLMQPY 66
Query: 56 PD 57
D
Sbjct: 67 ED 68
>gi|70570922|dbj|BAE06646.1| transcription factor protein [Ciona intestinalis]
Length = 468
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 39/67 (58%), Gaps = 18/67 (26%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPDTDSLYTSAYSSY 69
RVRVWFKNRRAKWRKRERN + DFK GF QFN M + Y SY
Sbjct: 296 RVRVWFKNRRAKWRKRERNQL-------TDFK-GFG-QFNSFMSHY--------DGY-SY 337
Query: 70 NNWASKV 76
NNWAS +
Sbjct: 338 NNWASTM 344
>gi|74096013|ref|NP_001027689.1| paired superclass homeobox transcription factor [Ciona
intestinalis]
gi|53801353|gb|AAU93886.1| pituitary homeobox pitx isoform a/b [Ciona intestinalis]
Length = 466
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 39/67 (58%), Gaps = 18/67 (26%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPDTDSLYTSAYSSY 69
RVRVWFKNRRAKWRKRERN + DFK GF QFN M + Y SY
Sbjct: 294 RVRVWFKNRRAKWRKRERNQL-------TDFK-GFG-QFNSFMSPY--------DGY-SY 335
Query: 70 NNWASKV 76
NNWAS +
Sbjct: 336 NNWASTM 342
>gi|149040300|gb|EDL94338.1| paired-like homeodomain transcription factor 3, isoform CRA_b
[Rattus norvegicus]
Length = 214
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 42/82 (51%), Gaps = 16/82 (19%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRER+ A K GF+ GL+ + +
Sbjct: 5 EEIAVWTNLTEARVRVWFKNRRAKWRKRERSQQ------AELCKGGFAAPLGGLVPPYEE 58
Query: 58 TDSLYTSAYSSYNNWASKVPSP 79
YT Y NW K +P
Sbjct: 59 VYPGYT-----YGNWPPKALAP 75
>gi|390473313|ref|XP_002756598.2| PREDICTED: LOW QUALITY PROTEIN: pituitary homeobox 3 [Callithrix
jacchus]
Length = 370
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 40/79 (50%), Gaps = 16/79 (20%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRER+ A K GF+ GL+ + +
Sbjct: 161 EEIAVWTNLTEARVRVWFKNRRAKWRKRERSQQ------AELCKGGFAAPLGGLVPPYEE 214
Query: 58 TDSLYTSAYSSYNNWASKV 76
Y SY NW K
Sbjct: 215 VYPGY-----SYGNWPPKA 228
>gi|9507015|ref|NP_062120.1| pituitary homeobox 3 [Rattus norvegicus]
gi|6226672|sp|P81062.2|PITX3_RAT RecName: Full=Pituitary homeobox 3; AltName: Full=Homeobox protein
PITX3; AltName: Full=Paired-like homeodomain
transcription factor 3
gi|4572639|emb|CAA09455.2| Ptx3 protein [Rattus norvegicus]
gi|149040298|gb|EDL94336.1| paired-like homeodomain transcription factor 3, isoform CRA_a
[Rattus norvegicus]
gi|149040299|gb|EDL94337.1| paired-like homeodomain transcription factor 3, isoform CRA_a
[Rattus norvegicus]
Length = 302
Score = 57.8 bits (138), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 42/82 (51%), Gaps = 16/82 (19%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRER+ A K GF+ GL+ + +
Sbjct: 93 EEIAVWTNLTEARVRVWFKNRRAKWRKRERSQQ------AELCKGGFAAPLGGLVPPYEE 146
Query: 58 TDSLYTSAYSSYNNWASKVPSP 79
YT Y NW K +P
Sbjct: 147 VYPGYT-----YGNWPPKALAP 163
>gi|23094260|emb|CAD27490.1| paired superclass homeobox transcription factor [Ciona
intestinalis]
Length = 374
Score = 57.8 bits (138), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 39/67 (58%), Gaps = 18/67 (26%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPDTDSLYTSAYSSY 69
RVRVWFKNRRAKWRKRERN + DFK GF QFN M + Y SY
Sbjct: 202 RVRVWFKNRRAKWRKRERNQL-------TDFK-GFG-QFNSFMSHY--------DGY-SY 243
Query: 70 NNWASKV 76
NNWAS +
Sbjct: 244 NNWASTM 250
>gi|148710035|gb|EDL41981.1| paired-like homeodomain transcription factor 3 [Mus musculus]
Length = 348
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 40/79 (50%), Gaps = 16/79 (20%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRER+ A K GF+ GL+ + +
Sbjct: 139 EEIAVWTNLTEARVRVWFKNRRAKWRKRERSQQ------AELCKGGFAAPLGGLVPPYEE 192
Query: 58 TDSLYTSAYSSYNNWASKV 76
Y SY NW K
Sbjct: 193 VYPGY-----SYGNWPPKA 206
>gi|395828473|ref|XP_003787402.1| PREDICTED: LOW QUALITY PROTEIN: pituitary homeobox 3 [Otolemur
garnettii]
Length = 450
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 42/82 (51%), Gaps = 16/82 (19%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRER+ A K GF+ GL+ + +
Sbjct: 241 EEIAVWTNLTEARVRVWFKNRRAKWRKRERSQQ------AELCKGGFAAPLGGLVPPYEE 294
Query: 58 TDSLYTSAYSSYNNWASKVPSP 79
Y SY NW K +P
Sbjct: 295 VYPGY-----SYGNWPPKALAP 311
>gi|6679341|ref|NP_032878.1| pituitary homeobox 3 [Mus musculus]
gi|3122612|sp|O35160.1|PITX3_MOUSE RecName: Full=Pituitary homeobox 3; AltName: Full=Homeobox protein
PITX3; AltName: Full=Paired-like homeodomain
transcription factor 3
gi|2645427|gb|AAB87380.1| homeobox protein Pitx3 [Mus musculus]
gi|111308398|gb|AAI20845.1| Paired-like homeodomain transcription factor 3 [Mus musculus]
gi|223460982|gb|AAI37811.1| Paired-like homeodomain transcription factor 3 [Mus musculus]
Length = 302
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 42/82 (51%), Gaps = 16/82 (19%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRER+ A K GF+ GL+ + +
Sbjct: 93 EEIAVWTNLTEARVRVWFKNRRAKWRKRERSQQ------AELCKGGFAAPLGGLVPPYEE 146
Query: 58 TDSLYTSAYSSYNNWASKVPSP 79
Y SY NW K +P
Sbjct: 147 VYPGY-----SYGNWPPKALAP 163
>gi|431895492|gb|ELK05008.1| Pituitary homeobox 3 [Pteropus alecto]
Length = 302
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 44/95 (46%), Gaps = 16/95 (16%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRER+ A K GF+ GL+ + +
Sbjct: 93 EEIAVWTNLTEARVRVWFKNRRAKWRKRERSQQ------AELCKGGFAAPLGGLVPPYEE 146
Query: 58 TDSLYTSAYSSYNNWASKVPSPLGTIGVNDLGFQS 92
Y SY NW K P T F S
Sbjct: 147 VYPGY-----SYGNWPPKALGPPLTAKTFPFAFNS 176
>gi|312066537|ref|XP_003136317.1| hypothetical protein LOAG_00729 [Loa loa]
gi|307768512|gb|EFO27746.1| hypothetical protein LOAG_00729 [Loa loa]
Length = 236
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/94 (42%), Positives = 49/94 (52%), Gaps = 22/94 (23%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQF--NGLMQTF 55
E +ALW+ RVRVWFKNRRAKWRKRER+ + DFK+ T L+ T
Sbjct: 64 EEIALWISLTEPRVRVWFKNRRAKWRKRERHLLTP------DFKSFQPTSCFPQALLPTH 117
Query: 56 PDTDSLYTSA----YSSYN-----NWASKVPSPL 80
P D +Y S+ YS+ N WA K PL
Sbjct: 118 PQLDDVYGSSSWQGYSTRNPNTAFGWALKAQGPL 151
>gi|300796563|ref|NP_001179234.1| pituitary homeobox 3 [Bos taurus]
gi|296472793|tpg|DAA14908.1| TPA: paired-like homeodomain 3-like [Bos taurus]
Length = 302
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 40/79 (50%), Gaps = 16/79 (20%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRER+ A K GF+ GL+ + +
Sbjct: 93 EEIAVWTNLTEARVRVWFKNRRAKWRKRERSQQ------AELCKGGFAAPLGGLVPPYEE 146
Query: 58 TDSLYTSAYSSYNNWASKV 76
Y SY NW K
Sbjct: 147 VYPGY-----SYGNWPPKA 160
>gi|395502236|ref|XP_003755488.1| PREDICTED: pituitary homeobox 3 [Sarcophilus harrisii]
Length = 214
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 42/82 (51%), Gaps = 16/82 (19%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRER+ A K GF GL+ P
Sbjct: 94 EEIAVWTNLTEARVRVWFKNRRAKWRKRERSQQ------AELCKGGFGASLGGLV---PP 144
Query: 58 TDSLYTSAYSSYNNWASKVPSP 79
+ LY SY NW K +P
Sbjct: 145 YEELYPGY--SYGNWPPKALAP 164
>gi|194041917|ref|XP_001925697.1| PREDICTED: pituitary homeobox 3-like [Sus scrofa]
Length = 531
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 40/79 (50%), Gaps = 16/79 (20%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRER+ A K GF+ GL+ + +
Sbjct: 325 EEIAVWTNLTEARVRVWFKNRRAKWRKRERSQQ------AELCKGGFAAPLGGLVPPYEE 378
Query: 58 TDSLYTSAYSSYNNWASKV 76
Y SY NW K
Sbjct: 379 VYPGY-----SYGNWPPKA 392
>gi|348578441|ref|XP_003474991.1| PREDICTED: pituitary homeobox 3-like [Cavia porcellus]
Length = 449
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 40/79 (50%), Gaps = 16/79 (20%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRER+ A K GF+ GL+ + D
Sbjct: 250 EEIAVWTNLTEARVRVWFKNRRAKWRKRERSQQ------AELCKGGFAAPLGGLVPPYED 303
Query: 58 TDSLYTSAYSSYNNWASKV 76
Y +Y NW K
Sbjct: 304 MYPGY-----AYGNWPPKA 317
>gi|295844825|ref|NP_001171524.1| pituitary homeobox 3 [Ovis aries]
gi|284919778|emb|CBA10128.1| paired-like homeodomain 3 [Ovis aries]
gi|295016061|emb|CBA10129.1| paired-like homeodomain 3 [Ovis aries]
gi|295016063|emb|CBA10130.1| paired-like homeodomain 3 [Ovis aries]
gi|295016065|emb|CBA10131.1| paired-like homeodomain 3 [Ovis aries]
Length = 302
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 40/79 (50%), Gaps = 16/79 (20%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRER+ A K GF+ GL+ + +
Sbjct: 93 EEIAVWTNLTEARVRVWFKNRRAKWRKRERSQQ------AELCKGGFAAPLGGLVPPYEE 146
Query: 58 TDSLYTSAYSSYNNWASKV 76
Y SY NW K
Sbjct: 147 VYPGY-----SYGNWPPKA 160
>gi|126273196|ref|XP_001369387.1| PREDICTED: pituitary homeobox 3-like [Monodelphis domestica]
Length = 305
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 42/82 (51%), Gaps = 16/82 (19%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRER+ A K GF GL+ P
Sbjct: 94 EEIAVWTTLTEARVRVWFKNRRAKWRKRERSQQ------AELCKGGFGASLGGLV---PP 144
Query: 58 TDSLYTSAYSSYNNWASKVPSP 79
+ LY SY NW K +P
Sbjct: 145 YEELYPG--YSYGNWPPKALAP 164
>gi|301756176|ref|XP_002913962.1| PREDICTED: pituitary homeobox 3-like [Ailuropoda melanoleuca]
Length = 438
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 40/79 (50%), Gaps = 16/79 (20%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRER+ A K GF+ GL+ + +
Sbjct: 229 EEIAVWTNLTEARVRVWFKNRRAKWRKRERSQQ------AELCKGGFAAPLGGLVPPYEE 282
Query: 58 TDSLYTSAYSSYNNWASKV 76
Y SY NW K
Sbjct: 283 VYPGY-----SYGNWPPKA 296
>gi|149689716|ref|XP_001499185.1| PREDICTED: pituitary homeobox 3-like [Equus caballus]
Length = 302
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 40/79 (50%), Gaps = 16/79 (20%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRER+ A K GF+ GL+ + +
Sbjct: 93 EEIAVWTNLTEARVRVWFKNRRAKWRKRERSQQ------AELCKGGFAAPLGGLVPPYEE 146
Query: 58 TDSLYTSAYSSYNNWASKV 76
Y SY NW K
Sbjct: 147 VYPGY-----SYGNWPPKA 160
>gi|440912409|gb|ELR61979.1| Pituitary homeobox 3 [Bos grunniens mutus]
Length = 267
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 40/79 (50%), Gaps = 16/79 (20%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRER+ A K GF+ GL+ + +
Sbjct: 93 EEIAVWTNLTEARVRVWFKNRRAKWRKRERSQQ------AELCKGGFAAPLGGLVPPYEE 146
Query: 58 TDSLYTSAYSSYNNWASKV 76
Y SY NW K
Sbjct: 147 VYPGY-----SYGNWPPKA 160
>gi|11527991|gb|AAG37069.1| homeobox Pitx2c [Xenopus laevis]
Length = 44
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/52 (57%), Positives = 32/52 (61%), Gaps = 9/52 (17%)
Query: 13 VWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPDTDSLYTS 64
VWFKNRRAKWRKRERN KNGF QFNGLMQ + D +Y S
Sbjct: 1 VWFKNRRAKWRKRERNQQAELC------KNGFGPQFNGLMQPY---DDMYPS 43
>gi|170589295|ref|XP_001899409.1| Homeobox domain containing protein [Brugia malayi]
gi|158593622|gb|EDP32217.1| Homeobox domain containing protein [Brugia malayi]
Length = 417
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 51/94 (54%), Gaps = 22/94 (23%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQF--NGLMQTF 55
E +ALW+ RVRVWFKNRRAKWRKRER+ + + +FK+ T L+ T
Sbjct: 245 EEIALWISLTEPRVRVWFKNRRAKWRKRERHLLTS------EFKSFQPTNCFPQSLLPTH 298
Query: 56 PDTDSLYTSA----YSSYNN-----WASKVPSPL 80
P + +Y S+ YS+ N+ WA K PL
Sbjct: 299 PQLEDVYGSSSWQGYSTRNSNTAFGWALKAQGPL 332
>gi|123996911|gb|ABM86057.1| paired-like homeodomain transcription factor 3 [synthetic
construct]
Length = 302
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 41/82 (50%), Gaps = 16/82 (19%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRER+ A K F+ GL+ + +
Sbjct: 93 EEIAVWTNLTEARVRVWFKNRRAKWRKRERSQQ------AELCKGSFAAPLGGLVPPYEE 146
Query: 58 TDSLYTSAYSSYNNWASKVPSP 79
Y SY NW K +P
Sbjct: 147 VYPGY-----SYGNWPPKALAP 163
>gi|4826912|ref|NP_005020.1| pituitary homeobox 3 [Homo sapiens]
gi|114632532|ref|XP_521591.2| PREDICTED: pituitary homeobox 3 [Pan troglodytes]
gi|297687264|ref|XP_002821135.1| PREDICTED: pituitary homeobox 3 [Pongo abelii]
gi|332212662|ref|XP_003255438.1| PREDICTED: pituitary homeobox 3 [Nomascus leucogenys]
gi|426366014|ref|XP_004050060.1| PREDICTED: pituitary homeobox 3 [Gorilla gorilla gorilla]
gi|6093723|sp|O75364.1|PITX3_HUMAN RecName: Full=Pituitary homeobox 3; AltName: Full=Homeobox protein
PITX3; AltName: Full=Paired-like homeodomain
transcription factor 3
gi|3258633|gb|AAC24502.1| homeodomain protein [Homo sapiens]
gi|15079651|gb|AAH11642.1| Paired-like homeodomain 3 [Homo sapiens]
gi|123982084|gb|ABM82871.1| paired-like homeodomain transcription factor 3 [synthetic
construct]
gi|123996913|gb|ABM86058.1| paired-like homeodomain transcription factor 3 [synthetic
construct]
gi|208966992|dbj|BAG73510.1| paired-like homeodomain 3 [synthetic construct]
gi|410335095|gb|JAA36494.1| paired-like homeodomain 3 [Pan troglodytes]
Length = 302
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 39/79 (49%), Gaps = 16/79 (20%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRER+ A K F+ GL+ + +
Sbjct: 93 EEIAVWTNLTEARVRVWFKNRRAKWRKRERSQQ------AELCKGSFAAPLGGLVPPYEE 146
Query: 58 TDSLYTSAYSSYNNWASKV 76
Y SY NW K
Sbjct: 147 VYPGY-----SYGNWPPKA 160
>gi|402881335|ref|XP_003904229.1| PREDICTED: pituitary homeobox 3 [Papio anubis]
Length = 302
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 39/79 (49%), Gaps = 16/79 (20%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRER+ A K F+ GL+ + +
Sbjct: 93 EEIAVWTNLTEARVRVWFKNRRAKWRKRERSQQ------AELCKGSFAAPLGGLVPPYEE 146
Query: 58 TDSLYTSAYSSYNNWASKV 76
Y SY NW K
Sbjct: 147 VYPGY-----SYGNWPPKA 160
>gi|397510722|ref|XP_003825740.1| PREDICTED: LOW QUALITY PROTEIN: pituitary homeobox 3 [Pan paniscus]
Length = 310
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 41/82 (50%), Gaps = 16/82 (19%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RVRVWFKNRRAKWRKRER+ A K F+ GL+ + +
Sbjct: 163 EEIAVWTNLTEARVRVWFKNRRAKWRKRERSQQ------AELCKGSFAAPLGGLVPPYEE 216
Query: 58 TDSLYTSAYSSYNNWASKVPSP 79
Y SY NW K +P
Sbjct: 217 VYPGY-----SYGNWPPKALAP 233
>gi|345792473|ref|XP_543986.3| PREDICTED: LOW QUALITY PROTEIN: pituitary homeobox 3 [Canis lupus
familiaris]
Length = 408
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 39/79 (49%), Gaps = 16/79 (20%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W RV VWFKNRRAKWRKRER+ A K GF+ GL+ + +
Sbjct: 199 EEIAVWTNLTEARVGVWFKNRRAKWRKRERSQQ------AELCKGGFAAPLGGLVPPYEE 252
Query: 58 TDSLYTSAYSSYNNWASKV 76
Y SY NW K
Sbjct: 253 VYPGY-----SYGNWPPKA 266
>gi|313221620|emb|CBY36107.1| unnamed protein product [Oikopleura dioica]
Length = 421
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/34 (70%), Positives = 26/34 (76%), Gaps = 5/34 (14%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMN 31
E +A+W RVRVWFKNRRAKWRKRERN MN
Sbjct: 185 EEIAMWTNLTEARVRVWFKNRRAKWRKRERNQMN 218
>gi|71068423|gb|AAZ23132.1| pituitary homeobox transcript variant 1 [Oikopleura dioica]
gi|71068428|gb|AAZ23136.1| pituitary homeobox transcript variant 1 [Oikopleura dioica]
Length = 426
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/34 (70%), Positives = 26/34 (76%), Gaps = 5/34 (14%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMN 31
E +A+W RVRVWFKNRRAKWRKRERN MN
Sbjct: 186 EEIAMWTNLTEARVRVWFKNRRAKWRKRERNQMN 219
>gi|324515845|gb|ADY46335.1| Homeobox protein unc-30 [Ascaris suum]
Length = 334
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 46/83 (55%), Gaps = 15/83 (18%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFK--NGFSTQFNGLMQTF 55
E +ALW+ RVRVWFKNRRAKWRKRER+ + DFK S L+ T
Sbjct: 170 EEIALWISLTEPRVRVWFKNRRAKWRKRERHLITP------DFKTFQPASCFSQALLPTH 223
Query: 56 PDTDSLYTSAYSSYNNWASKVPS 78
D +Y + SS+ ++ ++ PS
Sbjct: 224 SQLDEMYGA--SSWQSYPTRTPS 244
>gi|313236597|emb|CBY19890.1| unnamed protein product [Oikopleura dioica]
Length = 340
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/34 (70%), Positives = 26/34 (76%), Gaps = 5/34 (14%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMN 31
E +A+W RVRVWFKNRRAKWRKRERN MN
Sbjct: 104 EEIAMWTNLTEARVRVWFKNRRAKWRKRERNQMN 137
>gi|71068424|gb|AAZ23133.1| pituitary homeobox transcript variant 2 [Oikopleura dioica]
gi|71068430|gb|AAZ23137.1| pituitary homeobox transcript variant 2 [Oikopleura dioica]
Length = 340
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/34 (70%), Positives = 26/34 (76%), Gaps = 5/34 (14%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMN 31
E +A+W RVRVWFKNRRAKWRKRERN MN
Sbjct: 186 EEIAMWTNLTEARVRVWFKNRRAKWRKRERNQMN 219
>gi|327289193|ref|XP_003229309.1| PREDICTED: pituitary homeobox 3-like [Anolis carolinensis]
Length = 267
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 40/84 (47%), Gaps = 16/84 (19%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPDTDSLYTSAYSS- 68
R+RVWFKNRRAKWRK+ER+ + K GF Q NG + + Y Y S
Sbjct: 94 RIRVWFKNRRAKWRKKERHQQQSELC-----KGGFGPQLNGF------SGNPYEDLYPSY 142
Query: 69 -YNNWASKVPSPLGTIGVNDLGFQ 91
Y W K L ++ GFQ
Sbjct: 143 AYGAWGPKT---LHASPIHGKGFQ 163
>gi|56694820|gb|AAW23072.1| Pitx [Oikopleura dioica]
Length = 296
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/34 (70%), Positives = 26/34 (76%), Gaps = 5/34 (14%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMN 31
E +A+W RVRVWFKNRRAKWRKRERN MN
Sbjct: 104 EEIAMWTNLTEARVRVWFKNRRAKWRKRERNQMN 137
>gi|71068426|gb|AAZ23135.1| pituitary homeobox transcript variant 4 [Oikopleura dioica]
gi|71068434|gb|AAZ23139.1| pituitary homeobox transcript variant 4 [Oikopleura dioica]
Length = 258
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/34 (70%), Positives = 26/34 (76%), Gaps = 5/34 (14%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMN 31
E +A+W RVRVWFKNRRAKWRKRERN MN
Sbjct: 104 EEIAMWTNLTEARVRVWFKNRRAKWRKRERNQMN 137
>gi|281352063|gb|EFB27647.1| hypothetical protein PANDA_001770 [Ailuropoda melanoleuca]
Length = 303
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 40/80 (50%), Gaps = 17/80 (21%)
Query: 3 ELMALWL-----RVR-VWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFP 56
E +A+W RVR VWFKNRRAKWRKRER+ A K GF+ GL+ +
Sbjct: 93 EEIAVWTNLTEARVRAVWFKNRRAKWRKRERSQQ------AELCKGGFAAPLGGLVPPYE 146
Query: 57 DTDSLYTSAYSSYNNWASKV 76
+ Y SY NW K
Sbjct: 147 EVYPGY-----SYGNWPPKA 161
>gi|425906031|gb|AFY10812.1| Pitx [Isodiametra pulchra]
Length = 186
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 42/75 (56%), Gaps = 11/75 (14%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPDTD---SLYTSAY 66
+VR+WFKNRRAKWRK+ERN + ++KN + N + + D S T+ Y
Sbjct: 17 KVRIWFKNRRAKWRKKERNQLQ-------EYKNAAAFGMNFMPAPYDPHDFYSSQLTAGY 69
Query: 67 SSYNN-WASKVPSPL 80
S+YNN W SPL
Sbjct: 70 SAYNNAWTKMAASPL 84
>gi|308492333|ref|XP_003108357.1| CRE-UNC-30 protein [Caenorhabditis remanei]
gi|308249205|gb|EFO93157.1| CRE-UNC-30 protein [Caenorhabditis remanei]
Length = 326
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 36/65 (55%), Gaps = 11/65 (16%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAM--NAAAAAAVDFKNGFSTQ----FNGL 51
E +A+W+ RVRVWFKNRRAKWRKRERN + N + + STQ L
Sbjct: 144 EEIAVWISLTEPRVRVWFKNRRAKWRKRERNYVIDNGQGTSKASGQGLVSTQSLDPLGSL 203
Query: 52 MQTFP 56
TFP
Sbjct: 204 QNTFP 208
>gi|71981643|ref|NP_001021276.1| Protein UNC-30, isoform a [Caenorhabditis elegans]
gi|3873829|emb|CAA97770.1| Protein UNC-30, isoform a [Caenorhabditis elegans]
Length = 319
Score = 51.2 bits (121), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 31/61 (50%), Gaps = 5/61 (8%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W+ RVRVWFKNRRAKWRKRERN + L TFP
Sbjct: 143 EEIAVWISLTEPRVRVWFKNRRAKWRKRERNYVIDNGQGTTKVTAQSLDPLGSLQNTFPQ 202
Query: 58 T 58
T
Sbjct: 203 T 203
>gi|642080|gb|AAA63155.1| homeodomain protein [Caenorhabditis elegans]
gi|1092824|prf||2101290A UNC-30 protein
Length = 319
Score = 51.2 bits (121), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 31/61 (50%), Gaps = 5/61 (8%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W+ RVRVWFKNRRAKWRKRERN + L TFP
Sbjct: 143 EEIAVWISLTEPRVRVWFKNRRAKWRKRERNYVIDNGQGTTKVTAQSLDPLGSLQNTFPQ 202
Query: 58 T 58
T
Sbjct: 203 T 203
>gi|71981647|ref|NP_001021277.1| Protein UNC-30, isoform b [Caenorhabditis elegans]
gi|114152903|sp|P52906.2|UNC30_CAEEL RecName: Full=Homeobox protein unc-30; AltName: Full=Uncoordinated
protein 30
gi|38422260|emb|CAE54882.1| Protein UNC-30, isoform b [Caenorhabditis elegans]
Length = 323
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 31/61 (50%), Gaps = 5/61 (8%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W+ RVRVWFKNRRAKWRKRERN + L TFP
Sbjct: 143 EEIAVWISLTEPRVRVWFKNRRAKWRKRERNYVIDNGQGTTKVTAQSLDPLGSLQNTFPQ 202
Query: 58 T 58
T
Sbjct: 203 T 203
>gi|1078867|pir||S52424 homeodomain protein unc-30 - Caenorhabditis elegans
Length = 318
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 31/61 (50%), Gaps = 5/61 (8%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W+ RVRVWFKNRRAKWRKRERN + L TFP
Sbjct: 142 EEIAVWISLTEPRVRVWFKNRRAKWRKRERNYVIDNGQGTTKVTAQSLDPLGSLQNTFPQ 201
Query: 58 T 58
T
Sbjct: 202 T 202
>gi|258503931|gb|ACV72695.1| UNC-30 [Caenorhabditis remanei]
Length = 293
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 36/65 (55%), Gaps = 11/65 (16%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAM--NAAAAAAVDFKNGFSTQ----FNGL 51
E +A+W+ RVRVWFKNRRAKWRKRERN + N + + STQ L
Sbjct: 130 EEIAVWISLTEPRVRVWFKNRRAKWRKRERNYVIDNGQGTSKASGQGLVSTQSLDPLGSL 189
Query: 52 MQTFP 56
TFP
Sbjct: 190 QNTFP 194
>gi|258503947|gb|ACV72703.1| UNC-30 [Caenorhabditis remanei]
Length = 293
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 36/65 (55%), Gaps = 11/65 (16%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAM--NAAAAAAVDFKNGFSTQ----FNGL 51
E +A+W+ RVRVWFKNRRAKWRKRERN + N + + STQ L
Sbjct: 130 EEIAVWISLTEPRVRVWFKNRRAKWRKRERNYVIDNGQGTSKASGQGLVSTQSLDPLGSL 189
Query: 52 MQTFP 56
TFP
Sbjct: 190 QNTFP 194
>gi|258503941|gb|ACV72700.1| UNC-30 [Caenorhabditis remanei]
Length = 293
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 36/65 (55%), Gaps = 11/65 (16%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAM--NAAAAAAVDFKNGFSTQ----FNGL 51
E +A+W+ RVRVWFKNRRAKWRKRERN + N + + STQ L
Sbjct: 130 EEIAVWISLTEPRVRVWFKNRRAKWRKRERNYVIDNGQGTSKASGQGLVSTQSLDPLGSL 189
Query: 52 MQTFP 56
TFP
Sbjct: 190 QNTFP 194
>gi|258503929|gb|ACV72694.1| UNC-30 [Caenorhabditis remanei]
gi|258503935|gb|ACV72697.1| UNC-30 [Caenorhabditis remanei]
gi|258503937|gb|ACV72698.1| UNC-30 [Caenorhabditis remanei]
Length = 293
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 36/65 (55%), Gaps = 11/65 (16%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAM--NAAAAAAVDFKNGFSTQ----FNGL 51
E +A+W+ RVRVWFKNRRAKWRKRERN + N + + STQ L
Sbjct: 130 EEIAVWISLTEPRVRVWFKNRRAKWRKRERNYVIDNGQGTSKASGQGLVSTQSLDPLGSL 189
Query: 52 MQTFP 56
TFP
Sbjct: 190 QNTFP 194
>gi|258503917|gb|ACV72688.1| UNC-30 [Caenorhabditis remanei]
gi|258503923|gb|ACV72691.1| UNC-30 [Caenorhabditis remanei]
gi|258503925|gb|ACV72692.1| UNC-30 [Caenorhabditis remanei]
gi|258503927|gb|ACV72693.1| UNC-30 [Caenorhabditis remanei]
gi|258503933|gb|ACV72696.1| UNC-30 [Caenorhabditis remanei]
gi|258503939|gb|ACV72699.1| UNC-30 [Caenorhabditis remanei]
gi|258503943|gb|ACV72701.1| UNC-30 [Caenorhabditis remanei]
Length = 293
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 36/65 (55%), Gaps = 11/65 (16%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAM--NAAAAAAVDFKNGFSTQ----FNGL 51
E +A+W+ RVRVWFKNRRAKWRKRERN + N + + STQ L
Sbjct: 130 EEIAVWISLTEPRVRVWFKNRRAKWRKRERNYVIDNGQGTSKASGQGLVSTQSLDPLGSL 189
Query: 52 MQTFP 56
TFP
Sbjct: 190 QNTFP 194
>gi|392901434|ref|NP_001255701.1| Protein UNC-30, isoform d [Caenorhabditis elegans]
gi|379657089|emb|CCG28290.1| Protein UNC-30, isoform d [Caenorhabditis elegans]
Length = 181
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 31/61 (50%), Gaps = 5/61 (8%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W+ RVRVWFKNRRAKWRKRERN + L TFP
Sbjct: 5 EEIAVWISLTEPRVRVWFKNRRAKWRKRERNYVIDNGQGTTKVTAQSLDPLGSLQNTFPQ 64
Query: 58 T 58
T
Sbjct: 65 T 65
>gi|392901432|ref|NP_001255700.1| Protein UNC-30, isoform c [Caenorhabditis elegans]
gi|379657090|emb|CCG28291.1| Protein UNC-30, isoform c [Caenorhabditis elegans]
Length = 185
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 31/61 (50%), Gaps = 5/61 (8%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +A+W+ RVRVWFKNRRAKWRKRERN + L TFP
Sbjct: 5 EEIAVWISLTEPRVRVWFKNRRAKWRKRERNYVIDNGQGTTKVTAQSLDPLGSLQNTFPQ 64
Query: 58 T 58
T
Sbjct: 65 T 65
>gi|258503919|gb|ACV72689.1| UNC-30 [Caenorhabditis remanei]
gi|258503921|gb|ACV72690.1| UNC-30 [Caenorhabditis remanei]
gi|258503945|gb|ACV72702.1| UNC-30 [Caenorhabditis remanei]
Length = 293
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 36/65 (55%), Gaps = 11/65 (16%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAM--NAAAAAAVDFKNGFSTQ----FNGL 51
E +A+W+ RVRVWFKNRRAKWRKRERN + N + + STQ +
Sbjct: 130 EEIAVWISLTEPRVRVWFKNRRAKWRKRERNYVIDNGQGTSKASGQGLVSTQSLDPLGSI 189
Query: 52 MQTFP 56
TFP
Sbjct: 190 QNTFP 194
>gi|268552535|ref|XP_002634250.1| C. briggsae CBR-UNC-30 protein [Caenorhabditis briggsae]
Length = 327
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/31 (70%), Positives = 25/31 (80%), Gaps = 5/31 (16%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERN 28
E +A+W+ RVRVWFKNRRAKWRKRERN
Sbjct: 146 EEIAVWISLTEPRVRVWFKNRRAKWRKRERN 176
>gi|310706337|gb|ADP08781.1| pituitary homeobox 2 [Astyanax mexicanus]
Length = 131
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 31/56 (55%), Gaps = 11/56 (19%)
Query: 20 AKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPDTDSLYTSAYSSYNNWASK 75
AKWRKRERN A KNG QFNGLMQ + D YT YNNWA+K
Sbjct: 1 AKWRKRERNQQ------AELCKNGLGPQFNGLMQPYDDMYPSYT-----YNNWAAK 45
>gi|196166483|gb|ACG70800.1| Pitx [Convolutriloba longifissura]
Length = 600
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 10/65 (15%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPDTDSLYTSAYSS- 68
+VR+WFKNRRAKWRK+ERN + ++KN + N + + D Y++ ++
Sbjct: 426 KVRIWFKNRRAKWRKKERNQLQ-------EYKNAAAFGMNFMPAPY-DPHDFYSTQLTAG 477
Query: 69 -YNNW 72
YNNW
Sbjct: 478 YYNNW 482
>gi|47550979|ref|NP_999663.1| goosecoid transcription factor [Strongylocentrotus purpuratus]
gi|11127990|gb|AAG31170.1|AF315231_1 goosecoid transcription factor Gsc [Strongylocentrotus purpuratus]
Length = 320
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 28/71 (39%), Positives = 38/71 (53%), Gaps = 10/71 (14%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPDTDSLYTSAYSSY 69
RV VWFKNRRAKWRK++R AA A+ +K + ++ PD S+ T+ S
Sbjct: 188 RVEVWFKNRRAKWRKQKREQQEAAKRASEAYKTEYGSK--------PDKTSITTTTRPSS 239
Query: 70 N--NWASKVPS 78
N +S PS
Sbjct: 240 QPANESSHPPS 250
>gi|339237045|ref|XP_003380077.1| pituitary homeobox 1 [Trichinella spiralis]
gi|316977159|gb|EFV60307.1| pituitary homeobox 1 [Trichinella spiralis]
Length = 389
Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 44/80 (55%), Gaps = 12/80 (15%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQ---T 54
E +ALW RVRVWFKNRRAKWRKRER+ + + A +N +T ++Q T
Sbjct: 179 EEIALWTSLTEPRVRVWFKNRRAKWRKRERHLLADPRSNASSGQNYPAT--GSVVQPAAT 236
Query: 55 FPDTD--SLYTSAYSSYNNW 72
DT+ SL S+Y W
Sbjct: 237 HVDTNDPSLCACPGSAYGRW 256
>gi|402592974|gb|EJW86901.1| homeobox domain-containing protein, partial [Wuchereria
bancrofti]
Length = 170
Score = 47.8 bits (112), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 47/86 (54%), Gaps = 17/86 (19%)
Query: 6 ALWLRVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQF--NGLMQTFPDTDSLYT 63
++ L ++VWFKNRRAKWRKRER+ + + DFK+ T ++ T P + +Y
Sbjct: 6 SIVLLLKVWFKNRRAKWRKRERHLLTS------DFKSFQPTSCFPQSILPTHPQLEDVYG 59
Query: 64 SA----YSSYNN-----WASKVPSPL 80
S+ YS+ N+ WA K PL
Sbjct: 60 SSSWQGYSTRNSNTAFGWALKAQGPL 85
>gi|156554252|ref|XP_001601499.1| PREDICTED: hypothetical protein LOC100117188 [Nasonia vitripennis]
Length = 471
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 30/58 (51%), Gaps = 5/58 (8%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTF 55
E +AL L RV+VWF+NRRAKWRKRE A A G S FN L T
Sbjct: 216 EELALKLALSESRVQVWFQNRRAKWRKREPPRKTAGYMATGSASPGLSGSFNTLNSTL 273
>gi|350423879|ref|XP_003493619.1| PREDICTED: retinal homeobox protein Rx2-like [Bombus impatiens]
Length = 439
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 30/58 (51%), Gaps = 5/58 (8%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTF 55
E +AL L RV+VWF+NRRAKWRKRE A AA G S F L T
Sbjct: 187 EELALKLALSESRVQVWFQNRRAKWRKREPPRKTAGYMAAGSASPGLSGSFTSLNNTL 244
>gi|340726302|ref|XP_003401499.1| PREDICTED: retinal homeobox protein Rx2-like [Bombus terrestris]
Length = 439
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 30/58 (51%), Gaps = 5/58 (8%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTF 55
E +AL L RV+VWF+NRRAKWRKRE A AA G S F L T
Sbjct: 188 EELALKLALSESRVQVWFQNRRAKWRKREPPRKTAGYMAAGSASPGLSGSFTSLNNTL 245
>gi|47220562|emb|CAG05588.1| unnamed protein product [Tetraodon nigroviridis]
Length = 319
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 34/58 (58%), Gaps = 9/58 (15%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPDTDSLYTSAYS 67
RV+VWF+NRRAKWRKRER A K F+ ++ + P TDS YT A+S
Sbjct: 174 RVQVWFQNRRAKWRKRERYGQIQQA------KTHFAATYD--LSVLPRTDS-YTQAHS 222
>gi|587456|emb|CAA57161.1| alx3 [Mesocricetus auratus]
Length = 346
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 23/51 (45%), Positives = 30/51 (58%), Gaps = 8/51 (15%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPDTDS 60
RV+VWF+NRRAKWRKRER +N F+T ++ + P TDS
Sbjct: 199 RVQVWFQNRRAKWRKRERYGKMQEG------RNPFTTAYD--ISVLPRTDS 241
>gi|7106250|ref|NP_031467.1| homeobox protein aristaless-like 3 [Mus musculus]
gi|13626105|sp|O70137.1|ALX3_MOUSE RecName: Full=Homeobox protein aristaless-like 3; AltName:
Full=Proline-rich transcription factor ALX3
gi|3041869|gb|AAC15094.1| proline-rich transcription factor ALX3 [Mus musculus]
gi|74206384|dbj|BAE24916.1| unnamed protein product [Mus musculus]
gi|146327428|gb|AAI41538.1| Aristaless-like homeobox 3 [synthetic construct]
Length = 343
Score = 45.8 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 23/51 (45%), Positives = 30/51 (58%), Gaps = 8/51 (15%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPDTDS 60
RV+VWF+NRRAKWRKRER +N F+T ++ + P TDS
Sbjct: 196 RVQVWFQNRRAKWRKRERYGKMQEG------RNPFTTAYD--ISVLPRTDS 238
>gi|156386935|ref|XP_001634166.1| predicted protein [Nematostella vectensis]
gi|156221246|gb|EDO42103.1| predicted protein [Nematostella vectensis]
Length = 214
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 11/83 (13%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFK-NGFSTQFNGLMQTFP 56
E +AL L RV+VWF+NRRAKWRKRE+ A + +F G ++ G+ P
Sbjct: 51 EELALRLDLSEARVQVWFQNRRAKWRKREK----ALGRESPNFMYPGHGGEYRGVPTELP 106
Query: 57 DTDSLYTSAYSSY-NNWASKVPS 78
+ Y S+ + W VP+
Sbjct: 107 PLHTAYQPVPPSFMDRWNPHVPA 129
>gi|358339162|dbj|GAA47277.1| pituitary homeobox 1 [Clonorchis sinensis]
Length = 848
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 18/19 (94%), Positives = 19/19 (100%)
Query: 10 RVRVWFKNRRAKWRKRERN 28
RVRVWFKNRRAKWRKRER+
Sbjct: 213 RVRVWFKNRRAKWRKRERH 231
>gi|55742834|ref|NP_001007013.1| homeobox protein aristaless-like 3 [Rattus norvegicus]
gi|40018990|gb|AAR37014.1| aristaless-related ALX3 [Rattus norvegicus]
Length = 343
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 23/51 (45%), Positives = 31/51 (60%), Gaps = 8/51 (15%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPDTDS 60
RV+VWF+NRRAKWRKRER + +N F+T ++ + P TDS
Sbjct: 196 RVQVWFQNRRAKWRKRER------YGKIQEGRNPFTTAYD--ISVLPRTDS 238
>gi|149025640|gb|EDL81883.1| rCG29053 [Rattus norvegicus]
Length = 343
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 23/51 (45%), Positives = 31/51 (60%), Gaps = 8/51 (15%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPDTDS 60
RV+VWF+NRRAKWRKRER + +N F+T ++ + P TDS
Sbjct: 196 RVQVWFQNRRAKWRKRER------YGKIQEGRNPFTTAYD--ISVLPRTDS 238
>gi|38325834|gb|AAR17089.1| goosecoid [Lytechinus variegatus]
Length = 327
Score = 45.4 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 19/38 (50%), Positives = 25/38 (65%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQ 47
RV VWFKNRRAKWRK++R AA A +K + ++
Sbjct: 192 RVEVWFKNRRAKWRKQKREQQEAAKRACEAYKTEYGSK 229
>gi|449668650|ref|XP_002164986.2| PREDICTED: uncharacterized protein LOC100211037 [Hydra
magnipapillata]
Length = 250
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 24/33 (72%), Gaps = 5/33 (15%)
Query: 1 MGELMALWL-----RVRVWFKNRRAKWRKRERN 28
M E +A W RVR+WFKNRRAKWRK+ER+
Sbjct: 77 MREDIAQWCSLTESRVRIWFKNRRAKWRKKERH 109
>gi|68144510|gb|AAY86176.1| goosecoid [Heliocidaris tuberculata]
Length = 348
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 44/87 (50%), Gaps = 12/87 (13%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTF-------PDTDSLY 62
RV VWFKNRRAKWRK++R AA A+ +K ++ + T P + S
Sbjct: 193 RVEVWFKNRRAKWRKQKREQQEAAKRASEAYKTEHGSKPDKPPSTITTTPASRPSSRSAL 252
Query: 63 TSAYSSYNNWASKVPSPLGTIGVNDLG 89
S+Y + N +S++ T+G D G
Sbjct: 253 ESSYPASLNDSSRL-----TMGRYDGG 274
>gi|432103936|gb|ELK30769.1| Homeobox protein aristaless-like 3 [Myotis davidii]
Length = 354
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 27/69 (39%), Positives = 38/69 (55%), Gaps = 8/69 (11%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPDTDSLYTSAYSSY 69
RV+VWF+NRRAKWRKRER + +N FS+ ++ + P TDS S +
Sbjct: 207 RVQVWFQNRRAKWRKRER------YGKIQEGRNPFSSAYD--ISVLPRTDSHPQLQNSLW 258
Query: 70 NNWASKVPS 78
+ AS P+
Sbjct: 259 PSPASGSPT 267
>gi|189303837|gb|ACD85822.1| paired-like homeobox Prd2 [Mnemiopsis leidyi]
Length = 308
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 47/84 (55%), Gaps = 15/84 (17%)
Query: 10 RVRVWFKNRRAKWRKRERNA--MNAAAAAAVD-FKNGFSTQFNGLMQT----FPD-TDSL 61
RV+VWF+NRRAKWRK++R A NA A + V+ +G T++ + P + S+
Sbjct: 94 RVQVWFQNRRAKWRKKQREADMSNAGATSNVNRLISGLPTEYPPTAEPWSMNIPTISHSI 153
Query: 62 YTSAYS-----SYNNWASKVPSPL 80
TS YS Y+ AS PSP+
Sbjct: 154 PTSHYSFGSVVPYSTSAS--PSPM 175
>gi|125656316|gb|ABN48542.1| transcription factor Pitx2 II [Cyprinus carpio]
Length = 131
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 31/53 (58%), Gaps = 11/53 (20%)
Query: 23 RKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPDTDSLYTSAYSSYNNWASK 75
RKRERN A KNGF QFNGLMQ + D +Y S +YNNWA+K
Sbjct: 1 RKRERNQQ------AELCKNGFGPQFNGLMQPY---DDMYPSY--TYNNWAAK 42
>gi|383861065|ref|XP_003706007.1| PREDICTED: retinal homeobox protein Rx2-like [Megachile rotundata]
Length = 440
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 29/58 (50%), Gaps = 5/58 (8%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTF 55
E +AL L RV+VWF+NRRAKWRKRE A A G S F L T
Sbjct: 187 EELALKLALSESRVQVWFQNRRAKWRKREPPRKTAGYMATGSASPGLSGSFTSLNNTL 244
>gi|410976019|ref|XP_003994423.1| PREDICTED: pituitary homeobox 3 [Felis catus]
Length = 155
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 24/31 (77%), Gaps = 5/31 (16%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERN 28
E +A+W RVRVWFKNRRAKWRKRER+
Sbjct: 93 EEIAVWTNLTEARVRVWFKNRRAKWRKRERS 123
>gi|345324653|ref|XP_001505453.2| PREDICTED: hypothetical protein LOC100073723 [Ornithorhynchus
anatinus]
Length = 732
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 24/51 (47%), Positives = 30/51 (58%), Gaps = 8/51 (15%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPDTDS 60
RV+VWF+NRRAKWRKRER A +N F T ++ + P TDS
Sbjct: 579 RVQVWFQNRRAKWRKRERYGKIQEA------RNPFPTSYD--ISVLPRTDS 621
>gi|310706335|gb|ADP08780.1| pituitary homeobox 1 [Astyanax mexicanus]
Length = 161
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 37/66 (56%), Gaps = 15/66 (22%)
Query: 20 AKWRKRERNAMNAAAAAAVDF-KNGFSTQFNGLMQTFPDTDSLYTSAYSSYNNWASK--V 76
AKWRKRERN +D K+G+ QF+GL+Q + D YT YNNW +K
Sbjct: 1 AKWRKRERNQQ-------MDLCKSGYLPQFSGLVQPYEDMYPPYT-----YNNWTNKGLG 48
Query: 77 PSPLGT 82
P+PL T
Sbjct: 49 PTPLST 54
>gi|322795955|gb|EFZ18581.1| hypothetical protein SINV_05030 [Solenopsis invicta]
Length = 458
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 25/46 (54%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTF 55
RV+VWF+NRRAKWRK+E A AA G S F L T
Sbjct: 211 RVQVWFQNRRAKWRKKEPPRKTAGYMAAGSASPGLSGSFTSLNNTL 256
>gi|360045399|emb|CCD82947.1| pituitary homeobox protein-related [Schistosoma mansoni]
Length = 818
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 18/19 (94%), Positives = 19/19 (100%)
Query: 10 RVRVWFKNRRAKWRKRERN 28
RVRVWFKNRRAKWRKRER+
Sbjct: 116 RVRVWFKNRRAKWRKRERH 134
>gi|307209263|gb|EFN86359.1| Homeobox protein ARX [Harpegnathos saltator]
Length = 424
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 25/46 (54%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTF 55
RV+VWF+NRRAKWRK+E A AA G S F L T
Sbjct: 200 RVQVWFQNRRAKWRKKEPPRKTAGYMAAGSASPGLSGSFTSLNNTL 245
>gi|126310947|ref|XP_001372601.1| PREDICTED: homeobox protein aristaless-like 3-like [Monodelphis
domestica]
Length = 336
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 30/51 (58%), Gaps = 8/51 (15%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPDTDS 60
RV+VWF+NRRAKWRKRER + +N F+ ++ + P TDS
Sbjct: 189 RVQVWFQNRRAKWRKRER------YGKIQEVRNPFTATYD--ISVLPRTDS 231
>gi|322366524|gb|ADW95336.1| goosecoid [Paracentrotus lividus]
Length = 329
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 25/37 (67%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFST 46
RV VWFKNRRAKWRK++R AA A+ +K + +
Sbjct: 194 RVEVWFKNRRAKWRKQKREPQEAAKRASEVYKKEYGS 230
>gi|295389208|gb|ADG03434.1| homeobrain [Nematostella vectensis]
Length = 294
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 25/71 (35%), Positives = 37/71 (52%), Gaps = 6/71 (8%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFK-NGFSTQFNGLMQTFPDTDSLYTSAYSS 68
RV+VWF+NRRAKWRKRE+ A + +F G ++ G+ P + Y S
Sbjct: 143 RVQVWFQNRRAKWRKREK----ALGRESPNFMYPGHGGEYRGVPTELPPLHTAYQPVPPS 198
Query: 69 Y-NNWASKVPS 78
+ + W VP+
Sbjct: 199 FMDRWNPHVPA 209
>gi|354503342|ref|XP_003513740.1| PREDICTED: homeobox protein aristaless-like 3-like [Cricetulus
griseus]
Length = 479
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 23/51 (45%), Positives = 30/51 (58%), Gaps = 8/51 (15%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPDTDS 60
RV+VWF+NRRAKWRKRER +N F+T ++ + P TDS
Sbjct: 332 RVQVWFQNRRAKWRKRERYGKMQEG------RNPFTTAYD--ISVLPRTDS 374
>gi|395535578|ref|XP_003769800.1| PREDICTED: homeobox protein aristaless-like 3 [Sarcophilus
harrisii]
Length = 357
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 30/51 (58%), Gaps = 8/51 (15%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPDTDS 60
RV+VWF+NRRAKWRKRER + +N F+ ++ + P TDS
Sbjct: 210 RVQVWFQNRRAKWRKRER------YGKIQEVRNPFTATYD--ISVLPRTDS 252
>gi|256085144|ref|XP_002578783.1| pituitary homeobox protein-related [Schistosoma mansoni]
Length = 144
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/33 (63%), Positives = 24/33 (72%), Gaps = 5/33 (15%)
Query: 1 MGELMALWL-----RVRVWFKNRRAKWRKRERN 28
+ E +A W RVRVWFKNRRAKWRKRER+
Sbjct: 102 LREEIATWTELSEGRVRVWFKNRRAKWRKRERH 134
>gi|431896467|gb|ELK05879.1| Homeobox protein aristaless-like 3 [Pteropus alecto]
Length = 315
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 31/51 (60%), Gaps = 8/51 (15%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPDTDS 60
RV+VWF+NRRAKWRKRER + +N F++ ++ + P TDS
Sbjct: 164 RVQVWFQNRRAKWRKRER------YGKIQEGRNPFTSAYD--ISVLPRTDS 206
>gi|297664163|ref|XP_002810521.1| PREDICTED: homeobox protein aristaless-like 3 [Pongo abelii]
Length = 343
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 30/51 (58%), Gaps = 8/51 (15%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPDTDS 60
RV+VWF+NRRAKWRKRER + +N F+ ++ + P TDS
Sbjct: 196 RVQVWFQNRRAKWRKRER------YGKIQEGRNPFTAAYD--ISVLPRTDS 238
>gi|109013372|ref|XP_001099295.1| PREDICTED: ALX homeobox 3 [Macaca mulatta]
Length = 343
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 29/51 (56%), Gaps = 8/51 (15%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPDTDS 60
RV+VWF+NRRAKWRKRER +N F+ ++ + P TDS
Sbjct: 196 RVQVWFQNRRAKWRKRERYGKMQEG------RNPFTAAYD--ISVLPRTDS 238
>gi|4102043|gb|AAD01418.1| homeobox protein [Homo sapiens]
Length = 343
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 30/51 (58%), Gaps = 8/51 (15%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPDTDS 60
RV+VWF+NRRAKWRKRER + +N F+ ++ + P TDS
Sbjct: 196 RVQVWFQNRRAKWRKRER------YGKIQEGRNPFTAAYD--ISVLPRTDS 238
>gi|113204604|ref|NP_006483.2| homeobox protein aristaless-like 3 [Homo sapiens]
gi|426330701|ref|XP_004026345.1| PREDICTED: homeobox protein aristaless-like 3 [Gorilla gorilla
gorilla]
gi|215273931|sp|O95076.2|ALX3_HUMAN RecName: Full=Homeobox protein aristaless-like 3; AltName:
Full=Proline-rich transcription factor ALX3
gi|85566666|gb|AAI12008.1| ALX3 protein [Homo sapiens]
gi|109731688|gb|AAI13429.1| ALX homeobox 3 [Homo sapiens]
gi|119576834|gb|EAW56430.1| aristaless-like homeobox 3 [Homo sapiens]
Length = 343
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 30/51 (58%), Gaps = 8/51 (15%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPDTDS 60
RV+VWF+NRRAKWRKRER + +N F+ ++ + P TDS
Sbjct: 196 RVQVWFQNRRAKWRKRER------YGKIQEGRNPFTAAYD--ISVLPRTDS 238
>gi|114559041|ref|XP_524801.2| PREDICTED: ALX homeobox 3 [Pan troglodytes]
Length = 343
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 30/51 (58%), Gaps = 8/51 (15%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPDTDS 60
RV+VWF+NRRAKWRKRER + +N F+ ++ + P TDS
Sbjct: 196 RVQVWFQNRRAKWRKRER------YGKIQEGRNPFTAAYD--ISVLPRTDS 238
>gi|402855587|ref|XP_003892401.1| PREDICTED: homeobox protein aristaless-like 3 [Papio anubis]
Length = 343
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 29/51 (56%), Gaps = 8/51 (15%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPDTDS 60
RV+VWF+NRRAKWRKRER +N F+ ++ + P TDS
Sbjct: 196 RVQVWFQNRRAKWRKRERYGKMQEG------RNPFTAAYD--ISVLPRTDS 238
>gi|148669964|gb|EDL01911.1| aristaless 3 [Mus musculus]
Length = 258
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 31/51 (60%), Gaps = 8/51 (15%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPDTDS 60
RV+VWF+NRRAKWRKRER + +N F+T ++ + P TDS
Sbjct: 111 RVQVWFQNRRAKWRKRERY------GKMQEGRNPFTTAYD--ISVLPRTDS 153
>gi|296236105|ref|XP_002763220.1| PREDICTED: homeobox protein ESX1 [Callithrix jacchus]
Length = 297
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 17/30 (56%), Positives = 22/30 (73%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVD 39
RV++WF+NRRAKWR+ +R M AAA D
Sbjct: 170 RVQIWFQNRRAKWRRNQRMLMRNMAAAPPD 199
>gi|300796399|ref|NP_001179482.1| homeobox protein aristaless-like 3 [Bos taurus]
gi|296489406|tpg|DAA31519.1| TPA: aristaless-like homeobox 3-like [Bos taurus]
Length = 343
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 31/51 (60%), Gaps = 8/51 (15%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPDTDS 60
RV+VWF+NRRAKWRKRER + +N F++ ++ + P TDS
Sbjct: 196 RVQVWFQNRRAKWRKRER------YGKIQEGRNPFTSAYD--ISMLPRTDS 238
>gi|170048766|ref|XP_001853533.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167870759|gb|EDS34142.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 473
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 34/90 (37%), Positives = 41/90 (45%), Gaps = 22/90 (24%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQT----FPDTD------ 59
RV+VWF+NRRAKWRKRE +A N ST NG + T FP T
Sbjct: 245 RVQVWFQNRRAKWRKREPPRKSAYMG-----NNSPSTPMNGPIGTTFTQFPQTPTVTPPG 299
Query: 60 -----SLYTSAY--SSYNNWASKVPSPLGT 82
S Y + Y S + N S SP G+
Sbjct: 300 SVESWSTYQTPYELSPHFNLLSPAASPYGS 329
>gi|157114702|ref|XP_001652379.1| homeobox protein [Aedes aegypti]
gi|108883532|gb|EAT47757.1| AAEL001148-PA [Aedes aegypti]
Length = 236
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 5/57 (8%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGL-----MQTFPDTDSL 61
R++VWF+NRRAK+RK+E+ A A + + NG G Q +P +S+
Sbjct: 105 RIQVWFQNRRAKYRKQEKQLQKALAPSVIPSCNGMMRNIQGYSVSRGYQPYPHPNSI 161
>gi|56694804|gb|AAW23064.1| Arx [Oikopleura dioica]
Length = 277
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 17/28 (60%), Positives = 23/28 (82%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAA 37
RV+VWF+NRRAKWRKRE++A + A +
Sbjct: 169 RVQVWFQNRRAKWRKREKHAQDGGEAES 196
>gi|348587018|ref|XP_003479265.1| PREDICTED: homeobox protein aristaless-like 3-like [Cavia
porcellus]
Length = 343
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 29/51 (56%), Gaps = 8/51 (15%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPDTDS 60
RV+VWF+NRRAKWRKRER +N F+ ++ + P TDS
Sbjct: 196 RVQVWFQNRRAKWRKRERYGKMQEG------RNPFTAAYD--ISVLPRTDS 238
>gi|351704314|gb|EHB07233.1| Homeobox protein aristaless-like 3 [Heterocephalus glaber]
Length = 332
Score = 43.9 bits (102), Expect = 0.014, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 29/51 (56%), Gaps = 8/51 (15%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPDTDS 60
RV+VWF+NRRAKWRKRER +N F+ ++ + P TDS
Sbjct: 193 RVQVWFQNRRAKWRKRERYGKMQEG------RNPFTAAYD--ISVLPRTDS 235
>gi|308220108|gb|ADO22626.1| PRD class homeobox transcription factor PRD44 [Mnemiopsis leidyi]
Length = 579
Score = 43.5 bits (101), Expect = 0.014, Method: Composition-based stats.
Identities = 19/32 (59%), Positives = 25/32 (78%), Gaps = 2/32 (6%)
Query: 10 RVRVWFKNRRAKWRKRERNA--MNAAAAAAVD 39
RV+VWF+NRRAKWRK++R A NA A + V+
Sbjct: 139 RVQVWFQNRRAKWRKKQREADMSNAGATSNVN 170
>gi|91087879|ref|XP_969925.1| PREDICTED: similar to transcription factor protein [Tribolium
castaneum]
gi|270012765|gb|EFA09213.1| munster [Tribolium castaneum]
Length = 220
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 30/51 (58%), Gaps = 3/51 (5%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPDTDS 60
RV+VWF+NRRAKWRK+E++ N A ++ + ST + FP S
Sbjct: 89 RVQVWFQNRRAKWRKQEKSVKN---AQNINIPSACSTPLESPLLNFPPEQS 136
>gi|344254792|gb|EGW10896.1| Homeobox protein aristaless-like 3 [Cricetulus griseus]
Length = 200
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 31/51 (60%), Gaps = 8/51 (15%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPDTDS 60
RV+VWF+NRRAKWRKRER + +N F+T ++ + P TDS
Sbjct: 53 RVQVWFQNRRAKWRKRER------YGKMQEGRNPFTTAYD--ISVLPRTDS 95
>gi|357621094|gb|EHJ73052.1| hypothetical protein KGM_05078 [Danaus plexippus]
Length = 165
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGL--MQTFPDTDSL 61
R++VWF+NRRAK+RK+E+ A A A + NG G Q +P +++
Sbjct: 98 RIQVWFQNRRAKYRKQEKQLQKALAPAVLPGCNGMMRNIQGYRGYQPYPHPNTI 151
>gi|76563880|gb|ABA46370.1| goosecoid-like protein [Nematostella vectensis]
Length = 210
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 23/31 (74%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVDF 40
RV VWFKNRRAKWRK++R A+++ A D
Sbjct: 116 RVEVWFKNRRAKWRKQKREAVDSKKANEEDL 146
>gi|170048532|ref|XP_001853190.1| homeobox protein [Culex quinquefasciatus]
gi|167870623|gb|EDS34006.1| homeobox protein [Culex quinquefasciatus]
Length = 232
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 16/91 (17%)
Query: 11 VRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGL-----MQTFPDTDSLYTSA 65
VRVWF+NRRAK+RK+E+ A A + + NG G Q +P +S+
Sbjct: 24 VRVWFQNRRAKYRKQEKQLQKALAPSVIPSCNGMMRNIQGYSVSRGYQPYPHPNSINRYP 83
Query: 66 YSSYNNWASKVP-----------SPLGTIGV 85
+ AS P S +G++GV
Sbjct: 84 QDLFQMGASSYPGMTQPFSMSHSSNMGSVGV 114
>gi|432861307|ref|XP_004069603.1| PREDICTED: homeobox protein aristaless-like 4-like [Oryzias
latipes]
Length = 367
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 26/69 (37%), Positives = 37/69 (53%), Gaps = 7/69 (10%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPDT-DSLYTSAYSS 68
RV+VWF+NRRAKWRKRER + FST + + T P+ + S++
Sbjct: 216 RVQVWFQNRRAKWRKRER------FGQMQQVRTHFSTAYELPLLTRPENYAQIQNSSWIG 269
Query: 69 YNNWASKVP 77
++ AS VP
Sbjct: 270 SSSGASPVP 278
>gi|156389454|ref|XP_001635006.1| predicted protein [Nematostella vectensis]
gi|156222095|gb|EDO42943.1| predicted protein [Nematostella vectensis]
Length = 211
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 23/31 (74%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVDF 40
RV VWFKNRRAKWRK++R A+++ A D
Sbjct: 117 RVEVWFKNRRAKWRKQKREAVDSKKANEEDL 147
>gi|397478868|ref|XP_003810757.1| PREDICTED: homeobox protein aristaless-like 3, partial [Pan
paniscus]
Length = 295
Score = 43.5 bits (101), Expect = 0.016, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 30/51 (58%), Gaps = 8/51 (15%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPDTDS 60
RV+VWF+NRRAKWRKRER + +N F+ ++ + P TDS
Sbjct: 148 RVQVWFQNRRAKWRKRER------YGKIQEGRNPFTAAYD--ISVLPRTDS 190
>gi|395821545|ref|XP_003784098.1| PREDICTED: homeobox protein aristaless-like 3 [Otolemur garnettii]
Length = 343
Score = 43.5 bits (101), Expect = 0.016, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 30/51 (58%), Gaps = 8/51 (15%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPDTDS 60
RV+VWF+NRRAKWRKRER + +N F+ ++ + P TDS
Sbjct: 196 RVQVWFQNRRAKWRKRER------YGKIQEGRNPFTAAYD--ISVLPRTDS 238
>gi|405969514|gb|EKC34482.1| Aristaless-related homeobox protein [Crassostrea gigas]
Length = 376
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 16/24 (66%), Positives = 21/24 (87%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAA 33
R++VWF+NRRAKWRKRE+ A+ A
Sbjct: 144 RIQVWFQNRRAKWRKREKLALGAG 167
>gi|194211012|ref|XP_001918035.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein aristaless-like
3-like [Equus caballus]
Length = 346
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 31/51 (60%), Gaps = 8/51 (15%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPDTDS 60
RV+VWF+NRRAKWRKRER + +N F++ ++ + P TDS
Sbjct: 199 RVQVWFQNRRAKWRKRER------YGKIQEGRNPFTSAYD--ISMLPRTDS 241
>gi|410908863|ref|XP_003967910.1| PREDICTED: aristaless-related homeobox protein-like [Takifugu
rubripes]
Length = 463
Score = 43.5 bits (101), Expect = 0.018, Method: Composition-based stats.
Identities = 16/23 (69%), Positives = 20/23 (86%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNA 32
RV+VWF+NRRAKWRKRE+ + A
Sbjct: 264 RVQVWFQNRRAKWRKREKAGVQA 286
>gi|158290921|ref|XP_312452.4| AGAP002487-PA [Anopheles gambiae str. PEST]
gi|157018129|gb|EAA08201.4| AGAP002487-PA [Anopheles gambiae str. PEST]
Length = 503
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 5/57 (8%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGL-----MQTFPDTDSL 61
R++VWF+NRRAK+RK+E+ A A + + NG G Q +P +S+
Sbjct: 316 RIQVWFQNRRAKYRKQEKQLQKALAPSVIPSCNGMMRNIQGYSVSRGYQPYPHPNSI 372
>gi|48143219|ref|XP_393635.1| PREDICTED: retinal homeobox protein Rx2 [Apis mellifera]
Length = 442
Score = 43.1 bits (100), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 30/59 (50%), Gaps = 6/59 (10%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAA-AAAAVDFKNGFSTQFNGLMQTF 55
E +AL L RV+VWF+NRRAKWRKRE A AA G S F L T
Sbjct: 188 EELALKLALSESRVQVWFQNRRAKWRKREPPRKTAGYGMAAGSASPGLSGSFTSLNNTL 246
>gi|348523387|ref|XP_003449205.1| PREDICTED: ALX homeobox protein 1-like isoform 1 [Oreochromis
niloticus]
Length = 323
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 37/68 (54%), Gaps = 11/68 (16%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPDTDSLYTSAYSSY 69
RV+VWF+NRRAKWRKRER A K+ F+ ++ + P TDS YT +
Sbjct: 167 RVQVWFQNRRAKWRKRERYGQIQQA------KSHFAAAYD--LSVLPRTDS-YTQIPN-- 215
Query: 70 NNWASKVP 77
N W S P
Sbjct: 216 NLWPSPAP 223
>gi|47223503|emb|CAF97990.1| unnamed protein product [Tetraodon nigroviridis]
Length = 610
Score = 43.1 bits (100), Expect = 0.019, Method: Composition-based stats.
Identities = 16/23 (69%), Positives = 20/23 (86%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNA 32
RV+VWF+NRRAKWRKRE+ + A
Sbjct: 312 RVQVWFQNRRAKWRKREKAGVQA 334
>gi|317419844|emb|CBN81880.1| Aristaless-related homeobox protein [Dicentrarchus labrax]
Length = 463
Score = 43.1 bits (100), Expect = 0.019, Method: Composition-based stats.
Identities = 16/23 (69%), Positives = 20/23 (86%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNA 32
RV+VWF+NRRAKWRKRE+ + A
Sbjct: 264 RVQVWFQNRRAKWRKREKAGVQA 286
>gi|312381947|gb|EFR27556.1| hypothetical protein AND_05675 [Anopheles darlingi]
Length = 536
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 47/91 (51%), Gaps = 17/91 (18%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQT--- 54
E +AL L RV+VWF+NRRAKWRKRE +A N S NG M
Sbjct: 140 EELALKLNLSESRVQVWFQNRRAKWRKREPPRKSAYLG-----NNSPSAPMNGPMGASFG 194
Query: 55 -FPDTDSLYTSAYSSYNNWAS-KVPSPLGTI 83
FP T ++ + S ++W++ + P LG+I
Sbjct: 195 QFPQTATV--TPPGSVDSWSTYQTPYDLGSI 223
>gi|348523389|ref|XP_003449206.1| PREDICTED: ALX homeobox protein 1-like isoform 2 [Oreochromis
niloticus]
Length = 318
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 37/68 (54%), Gaps = 11/68 (16%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPDTDSLYTSAYSSY 69
RV+VWF+NRRAKWRKRER A K+ F+ ++ + P TDS YT +
Sbjct: 162 RVQVWFQNRRAKWRKRERYGQIQQA------KSHFAAAYD--LSVLPRTDS-YTQIPN-- 210
Query: 70 NNWASKVP 77
N W S P
Sbjct: 211 NLWPSPAP 218
>gi|332018355|gb|EGI58960.1| Retinal homeobox protein Rax [Acromyrmex echinatior]
Length = 449
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 25/46 (54%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTF 55
RV+VWF+NRRAKWRK+E A+ AA G F L T
Sbjct: 208 RVQVWFQNRRAKWRKKEPPRKTASFIAAGSASPGLPGSFTSLNNTL 253
>gi|403284219|ref|XP_003933476.1| PREDICTED: homeobox protein aristaless-like 3 [Saimiri boliviensis
boliviensis]
Length = 343
Score = 43.1 bits (100), Expect = 0.020, Method: Composition-based stats.
Identities = 16/18 (88%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRKRER
Sbjct: 196 RVQVWFQNRRAKWRKRER 213
>gi|410947945|ref|XP_003980702.1| PREDICTED: homeobox protein prophet of Pit-1-like [Felis catus]
Length = 226
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 35/69 (50%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPDTDSLYTSAYSSY 69
R++VWF+NRRAK RK+ER+ + A + +GF + ++P + T Y
Sbjct: 112 RIQVWFQNRRAKQRKQERSLLQPLAQLSPATFSGFLPEPPACPYSYPTPPAPMTCFPHPY 171
Query: 70 NNWASKVPS 78
N+ PS
Sbjct: 172 NHALPSQPS 180
>gi|348512008|ref|XP_003443535.1| PREDICTED: aristaless-related homeobox protein-like [Oreochromis
niloticus]
Length = 466
Score = 43.1 bits (100), Expect = 0.021, Method: Composition-based stats.
Identities = 16/23 (69%), Positives = 20/23 (86%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNA 32
RV+VWF+NRRAKWRKRE+ + A
Sbjct: 265 RVQVWFQNRRAKWRKREKAGVQA 287
>gi|195398755|ref|XP_002057986.1| GJ15837 [Drosophila virilis]
gi|194150410|gb|EDW66094.1| GJ15837 [Drosophila virilis]
Length = 664
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 25/41 (60%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNG 50
R++VWF+NRRAK+RK+E+ A A + + NG G
Sbjct: 533 RIQVWFQNRRAKYRKQEKQLQKALAPSVIPSCNGMMRNIQG 573
>gi|380024278|ref|XP_003695930.1| PREDICTED: retinal homeobox protein Rx2-like [Apis florea]
Length = 442
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 30/59 (50%), Gaps = 6/59 (10%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAA-AAAAVDFKNGFSTQFNGLMQTF 55
E +AL L RV+VWF+NRRAKWRKRE A AA G S F L T
Sbjct: 187 EELALKLALSESRVQVWFQNRRAKWRKREPPRKTAGYGMAAGSASPGLSGSFTSLNNTL 245
>gi|291398309|ref|XP_002715836.1| PREDICTED: aristaless-like homeobox 3 [Oryctolagus cuniculus]
Length = 343
Score = 43.1 bits (100), Expect = 0.021, Method: Composition-based stats.
Identities = 16/18 (88%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRKRER
Sbjct: 196 RVQVWFQNRRAKWRKRER 213
>gi|332237569|ref|XP_003267978.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein aristaless-like 3
[Nomascus leucogenys]
Length = 343
Score = 43.1 bits (100), Expect = 0.021, Method: Composition-based stats.
Identities = 16/18 (88%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRKRER
Sbjct: 196 RVQVWFQNRRAKWRKRER 213
>gi|350583559|ref|XP_003125909.3| PREDICTED: homeobox protein aristaless-like 3-like [Sus scrofa]
Length = 448
Score = 43.1 bits (100), Expect = 0.022, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 31/51 (60%), Gaps = 8/51 (15%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPDTDS 60
RV+VWF+NRRAKWRKRER + +N F++ ++ + P TDS
Sbjct: 301 RVQVWFQNRRAKWRKRER------YGKIQEGRNPFTSAYD--ISVLPRTDS 343
>gi|171544937|ref|NP_001116385.1| aristaless-related homeobox protein [Oryzias latipes]
gi|157410507|gb|ABV53977.1| aristaless-related homeobox protein [Oryzias latipes]
Length = 464
Score = 43.1 bits (100), Expect = 0.022, Method: Composition-based stats.
Identities = 16/23 (69%), Positives = 20/23 (86%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNA 32
RV+VWF+NRRAKWRKRE+ + A
Sbjct: 265 RVQVWFQNRRAKWRKREKAGVQA 287
>gi|296208775|ref|XP_002751237.1| PREDICTED: homeobox protein aristaless-like 3 [Callithrix jacchus]
Length = 343
Score = 43.1 bits (100), Expect = 0.023, Method: Composition-based stats.
Identities = 16/18 (88%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRKRER
Sbjct: 196 RVQVWFQNRRAKWRKRER 213
>gi|133778704|gb|AAI33878.1| Arx protein [Danio rerio]
Length = 382
Score = 42.7 bits (99), Expect = 0.024, Method: Composition-based stats.
Identities = 16/23 (69%), Positives = 20/23 (86%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNA 32
RV+VWF+NRRAKWRKRE+ + A
Sbjct: 258 RVQVWFQNRRAKWRKREKAGVQA 280
>gi|195133672|ref|XP_002011263.1| GI16434 [Drosophila mojavensis]
gi|193907238|gb|EDW06105.1| GI16434 [Drosophila mojavensis]
Length = 614
Score = 42.7 bits (99), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 25/41 (60%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNG 50
R++VWF+NRRAK+RK+E+ A A + + NG G
Sbjct: 483 RIQVWFQNRRAKYRKQEKQLQKALAPSVIPSCNGMMRNIQG 523
>gi|18858285|ref|NP_571459.1| aristaless-related homeobox protein [Danio rerio]
gi|18202032|sp|O42115.1|ARX_DANRE RecName: Full=Aristaless-related homeobox protein; Short=ARX
gi|2317261|dbj|BAA21764.1| Arx homeoprotein [Danio rerio]
gi|190337749|gb|AAI63865.1| Aristaless related homeobox [Danio rerio]
gi|190337753|gb|AAI63872.1| Aristaless related homeobox [Danio rerio]
Length = 453
Score = 42.7 bits (99), Expect = 0.025, Method: Composition-based stats.
Identities = 16/23 (69%), Positives = 20/23 (86%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNA 32
RV+VWF+NRRAKWRKRE+ + A
Sbjct: 258 RVQVWFQNRRAKWRKREKAGVQA 280
>gi|432918406|ref|XP_004079609.1| PREDICTED: ALX homeobox protein 1-like [Oryzias latipes]
Length = 326
Score = 42.7 bits (99), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 40/74 (54%), Gaps = 13/74 (17%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPDTDSLYTSAYSSY 69
RV+VWF+NRRAKWRKRER A K F+ ++ + P TD YT +
Sbjct: 167 RVQVWFQNRRAKWRKRERYGQIQQA------KTHFAATYD--LSALPRTDG-YTQIPN-- 215
Query: 70 NNWASKVPSPLGTI 83
N W S P+P G++
Sbjct: 216 NLWPS--PTPGGSV 227
>gi|432114807|gb|ELK36551.1| Pituitary homeobox 2 [Myotis davidii]
Length = 292
Score = 42.7 bits (99), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 36/71 (50%), Gaps = 12/71 (16%)
Query: 5 MALWLRVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPDTDSLYTS 64
M+ + VW A+ R RERN A KNGF QFNGLMQ + D +Y
Sbjct: 99 MSTREEIAVWTNLTEARVR-RERNQQ------AELCKNGFGPQFNGLMQPY---DDMYPG 148
Query: 65 AYSSYNNWASK 75
SYNNWA+K
Sbjct: 149 Y--SYNNWAAK 157
>gi|313475156|dbj|BAJ41033.1| aristaless-like transcription factor [Scaphechinus mirabilis]
Length = 463
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 16/18 (88%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRKRER
Sbjct: 179 RVQVWFQNRRAKWRKRER 196
>gi|339249747|ref|XP_003373861.1| retinal homeobox protein Rax [Trichinella spiralis]
gi|316969949|gb|EFV53972.1| retinal homeobox protein Rax [Trichinella spiralis]
Length = 560
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 2/85 (2%)
Query: 3 ELMALWLRVRVWFKNRRAKWRKRERNAMNAA--AAAAVDFKNGFSTQFNGLMQTFPDTDS 60
++ + L VWF+NRRAKWRKRE+ + A A + D + +Q + D
Sbjct: 273 KMYKMLLMCIVWFQNRRAKWRKREKALGHEAGYAQPSADTGHAIYSQHPVAVAFRQDGQL 332
Query: 61 LYTSAYSSYNNWASKVPSPLGTIGV 85
T+ +S + VP P IGV
Sbjct: 333 GLTTPFSPLSVRPPAVPPPTSAIGV 357
>gi|443687177|gb|ELT90234.1| hypothetical protein CAPTEDRAFT_154864 [Capitella teleta]
Length = 335
Score = 42.7 bits (99), Expect = 0.026, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 8/62 (12%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPDTDSLYTSAYSSY 69
R++VWF+NRRAK+RK+E+ + + A + NG + +P T Y AY S+
Sbjct: 159 RIQVWFQNRRAKYRKQEKQLAKSLSPAVIPTCNGM------MRNIYPSTSRPY--AYPSH 210
Query: 70 NN 71
N+
Sbjct: 211 NS 212
>gi|410899545|ref|XP_003963257.1| PREDICTED: homeobox protein aristaless-like 3-like [Takifugu
rubripes]
Length = 359
Score = 42.7 bits (99), Expect = 0.026, Method: Composition-based stats.
Identities = 16/18 (88%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRKRER
Sbjct: 201 RVQVWFQNRRAKWRKRER 218
>gi|348514896|ref|XP_003444976.1| PREDICTED: hypothetical protein LOC100711376 [Oreochromis
niloticus]
Length = 556
Score = 42.7 bits (99), Expect = 0.026, Method: Composition-based stats.
Identities = 16/18 (88%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRKRER
Sbjct: 396 RVQVWFQNRRAKWRKRER 413
>gi|68144508|gb|AAY86175.1| goosecoid [Heliocidaris erythrogramma]
Length = 321
Score = 42.7 bits (99), Expect = 0.027, Method: Composition-based stats.
Identities = 18/28 (64%), Positives = 21/28 (75%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAA 37
RV VWFKNRRAKWRK++R AA A+
Sbjct: 194 RVEVWFKNRRAKWRKQKREQQEAAKRAS 221
>gi|260831452|ref|XP_002610673.1| hypothetical protein BRAFLDRAFT_116854 [Branchiostoma floridae]
gi|229296040|gb|EEN66683.1| hypothetical protein BRAFLDRAFT_116854 [Branchiostoma floridae]
Length = 243
Score = 42.7 bits (99), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 20/30 (66%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVD 39
RV VWFKNRRAKWRK++R AA D
Sbjct: 145 RVEVWFKNRRAKWRKQQREVTERTTKAADD 174
>gi|9739171|gb|AAF97935.1|AF281674_1 homeodomain protein goosecoid [Branchiostoma floridae]
Length = 243
Score = 42.7 bits (99), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 20/30 (66%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVD 39
RV VWFKNRRAKWRK++R AA D
Sbjct: 145 RVEVWFKNRRAKWRKQQREVTERTTKAADD 174
>gi|196010828|ref|XP_002115278.1| hypothetical protein TRIADDRAFT_17913 [Trichoplax adhaerens]
gi|190582049|gb|EDV22123.1| hypothetical protein TRIADDRAFT_17913 [Trichoplax adhaerens]
Length = 70
Score = 42.7 bits (99), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 24/30 (80%), Gaps = 5/30 (16%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRER 27
E +A+W+ RVRVWFKNRRAKWRKRER
Sbjct: 41 EEIAMWINLNESRVRVWFKNRRAKWRKRER 70
>gi|158293967|ref|XP_315326.4| AGAP005311-PA [Anopheles gambiae str. PEST]
gi|157015346|gb|EAA11051.4| AGAP005311-PA [Anopheles gambiae str. PEST]
Length = 349
Score = 42.7 bits (99), Expect = 0.030, Method: Composition-based stats.
Identities = 19/34 (55%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNG 43
RV+VWF+NRRAKWRKRE+ AM +A + + G
Sbjct: 159 RVQVWFQNRRAKWRKREK-AMGRDTSAFLHHEQG 191
>gi|351700009|gb|EHB02928.1| Dorsal root ganglia homeobox protein [Heterocephalus glaber]
Length = 443
Score = 42.7 bits (99), Expect = 0.031, Method: Composition-based stats.
Identities = 17/27 (62%), Positives = 20/27 (74%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAA 36
RV+VWF+NRRAKWRK ER A + A
Sbjct: 82 RVQVWFQNRRAKWRKTERGASDQEPGA 108
>gi|344275621|ref|XP_003409610.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein aristaless-like
3-like [Loxodonta africana]
Length = 343
Score = 42.7 bits (99), Expect = 0.031, Method: Composition-based stats.
Identities = 16/18 (88%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRKRER
Sbjct: 196 RVQVWFQNRRAKWRKRER 213
>gi|291222403|ref|XP_002731203.1| PREDICTED: predicted protein-like [Saccoglossus kowalevskii]
Length = 379
Score = 42.4 bits (98), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 39/68 (57%), Gaps = 13/68 (19%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +AL L RV+VWF+NRRAKWRKRE+ A + N F + +NG + +
Sbjct: 200 EELALRLDLSEARVQVWFQNRRAKWRKREK-------ALGRESPN-FLSPYNGDLSPVSE 251
Query: 58 TDSLYTSA 65
++ Y+SA
Sbjct: 252 LNAHYSSA 259
>gi|407025361|gb|AFS65547.1| Alx1, partial [Parastichopus parvimensis]
Length = 311
Score = 42.4 bits (98), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 20/32 (62%), Positives = 23/32 (71%), Gaps = 5/32 (15%)
Query: 1 MGELMALWL-----RVRVWFKNRRAKWRKRER 27
M E +AL RV+VWF+NRRAKWRKRER
Sbjct: 139 MREQLALRCDLTEARVQVWFQNRRAKWRKRER 170
>gi|115702398|ref|XP_785238.2| PREDICTED: homeobox protein aristaless-like 4-like
[Strongylocentrotus purpuratus]
Length = 353
Score = 42.4 bits (98), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 20/29 (68%), Positives = 22/29 (75%), Gaps = 4/29 (13%)
Query: 10 RVRVWFKNRRAKWRKRER----NAMNAAA 34
RV+VWF+NRRAKWRKRER N M A A
Sbjct: 149 RVQVWFQNRRAKWRKRERFSQFNTMRAMA 177
>gi|440909664|gb|ELR59549.1| Homeobox protein aristaless-like 3, partial [Bos grunniens mutus]
Length = 273
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 31/51 (60%), Gaps = 8/51 (15%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPDTDS 60
RV+VWF+NRRAKWRKRER + +N F++ ++ + P TDS
Sbjct: 133 RVQVWFQNRRAKWRKRER------YGKIQEGRNPFTSAYD--ISMLPRTDS 175
>gi|195163990|ref|XP_002022832.1| GL14778 [Drosophila persimilis]
gi|194104855|gb|EDW26898.1| GL14778 [Drosophila persimilis]
Length = 596
Score = 42.4 bits (98), Expect = 0.034, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 5/73 (6%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGL-----MQTFPDTDSLYTS 64
R++VWF+NRRAK+RK+E+ A A + + NG G Q +P +++
Sbjct: 465 RIQVWFQNRRAKYRKQEKQLQKALAPSVIPSCNGMMRNIQGYSVSRGYQPYPHHNTMNRY 524
Query: 65 AYSSYNNWASKVP 77
+ AS P
Sbjct: 525 PQDLFQMGASSYP 537
>gi|426258372|ref|XP_004022787.1| PREDICTED: homeobox protein ESX1 [Ovis aries]
Length = 302
Score = 42.4 bits (98), Expect = 0.035, Method: Composition-based stats.
Identities = 20/47 (42%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFP 56
RV+VWF+NRRAKWR+ +R A+ + F + FNG FP
Sbjct: 186 RVQVWFQNRRAKWRRYQR-ALMFRNVHPIAFGHPMGVIFNGPYHVFP 231
>gi|108735476|gb|ABG00197.1| Alx1 [Paracentrotus lividus]
Length = 519
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 16/18 (88%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRKRER
Sbjct: 243 RVQVWFQNRRAKWRKRER 260
>gi|30841697|gb|AAP34699.1| aristaless-like homeobox protein [Lytechinus variegatus]
Length = 429
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 16/18 (88%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRKRER
Sbjct: 160 RVQVWFQNRRAKWRKRER 177
>gi|410967992|ref|XP_003990497.1| PREDICTED: homeobox protein aristaless-like 3 [Felis catus]
Length = 372
Score = 42.4 bits (98), Expect = 0.036, Method: Composition-based stats.
Identities = 16/18 (88%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRKRER
Sbjct: 225 RVQVWFQNRRAKWRKRER 242
>gi|351696938|gb|EHA99856.1| Homeobox protein aristaless-like 4, partial [Heterocephalus glaber]
Length = 300
Score = 42.4 bits (98), Expect = 0.036, Method: Composition-based stats.
Identities = 16/18 (88%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRKRER
Sbjct: 145 RVQVWFQNRRAKWRKRER 162
>gi|426218849|ref|XP_004003649.1| PREDICTED: homeobox protein aristaless-like 3 [Ovis aries]
Length = 330
Score = 42.4 bits (98), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 31/51 (60%), Gaps = 8/51 (15%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPDTDS 60
RV+VWF+NRRAKWRKRER + +N F++ ++ + P TDS
Sbjct: 183 RVQVWFQNRRAKWRKRERYGK------IQEGRNPFTSAYD--ISMLPRTDS 225
>gi|444724758|gb|ELW65356.1| Homeobox protein aristaless-like 3 [Tupaia chinensis]
Length = 260
Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 30/51 (58%), Gaps = 8/51 (15%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPDTDS 60
RV+VWF+NRRAKWRKRER + +N F+ ++ + P TDS
Sbjct: 113 RVQVWFQNRRAKWRKRER------YGKIQEGRNPFTAAYD--ISVLPRTDS 155
>gi|198471041|ref|XP_002133645.1| GA23014 [Drosophila pseudoobscura pseudoobscura]
gi|198145739|gb|EDY72272.1| GA23014 [Drosophila pseudoobscura pseudoobscura]
Length = 684
Score = 42.4 bits (98), Expect = 0.038, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 5/73 (6%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGL-----MQTFPDTDSLYTS 64
R++VWF+NRRAK+RK+E+ A A + + NG G Q +P +++
Sbjct: 553 RIQVWFQNRRAKYRKQEKQLQKALAPSVIPSCNGMMRNIQGYSVSRGYQPYPHHNTMNRY 612
Query: 65 AYSSYNNWASKVP 77
+ AS P
Sbjct: 613 PQDLFQMGASSYP 625
>gi|125820954|ref|XP_001340966.1| PREDICTED: aristaless-like homeobox 4a [Danio rerio]
Length = 368
Score = 42.4 bits (98), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 16/18 (88%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRKRER
Sbjct: 218 RVQVWFQNRRAKWRKRER 235
>gi|260796221|ref|XP_002593103.1| Q50 paired-like homeodomain transcription factor [Branchiostoma
floridae]
gi|229278327|gb|EEN49114.1| Q50 paired-like homeodomain transcription factor [Branchiostoma
floridae]
Length = 383
Score = 42.4 bits (98), Expect = 0.040, Method: Composition-based stats.
Identities = 15/18 (83%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRKRE+
Sbjct: 222 RVQVWFQNRRAKWRKREK 239
>gi|113682307|ref|NP_001038539.1| ALX homeobox protein 1 [Danio rerio]
gi|94732446|emb|CAK11128.1| novel protein similar to vertebrate cartilage paired-class
homeoprotein 1 (CART1) [Danio rerio]
Length = 320
Score = 42.4 bits (98), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 30/51 (58%), Gaps = 8/51 (15%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPDTDS 60
RV+VWF+NRRAKWRKRER A K+ F+ ++ M P TDS
Sbjct: 163 RVQVWFQNRRAKWRKRERYGQIQQA------KSHFAATYDISM--LPRTDS 205
>gi|410901415|ref|XP_003964191.1| PREDICTED: dorsal root ganglia homeobox protein-like [Takifugu
rubripes]
Length = 307
Score = 42.4 bits (98), Expect = 0.040, Method: Composition-based stats.
Identities = 16/23 (69%), Positives = 20/23 (86%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNA 32
RV+VWF+NRRAKWRK ER + +A
Sbjct: 85 RVQVWFQNRRAKWRKTERGSTDA 107
>gi|156547635|ref|XP_001603937.1| PREDICTED: retinal homeobox protein Rx-A-like [Nasonia vitripennis]
Length = 306
Score = 42.0 bits (97), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 15/83 (18%)
Query: 9 LRVRVWFKNRRAKWRKRER--------------NAMNAAAAAAVDFKNGFSTQFNGLMQT 54
+RV+VWF+NRRAKWR++E+ NAM + A A+ G G++ T
Sbjct: 132 VRVQVWFQNRRAKWRRQEKMEAARLGISEYHAANAMRSVAGPALGLP-GDPWLHPGVLNT 190
Query: 55 FPDTDSLYTSAYSSYNNWASKVP 77
P + + Y+SY ++P
Sbjct: 191 LPGFLTAPPAGYASYLTSPRRLP 213
>gi|312889|emb|CAA46108.1| unc-4 [Caenorhabditis elegans]
gi|228577|prf||1806384A homeo domain protein
Length = 184
Score = 42.0 bits (97), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 35/61 (57%), Gaps = 9/61 (14%)
Query: 1 MGELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTF 55
M E +A+ L RV+VWF+NRRAKWRKRE+N N ++ D T+ + TF
Sbjct: 81 MREALAMRLDLLESRVQVWFQNRRAKWRKREQN-RNGSSEIKKDDGEQMETK---ALPTF 136
Query: 56 P 56
P
Sbjct: 137 P 137
>gi|348512783|ref|XP_003443922.1| PREDICTED: homeobox protein aristaless-like 4-like [Oreochromis
niloticus]
Length = 368
Score = 42.0 bits (97), Expect = 0.042, Method: Composition-based stats.
Identities = 16/18 (88%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRKRER
Sbjct: 217 RVQVWFQNRRAKWRKRER 234
>gi|256017083|dbj|BAH97320.1| aristaless-like homeobox protein [Hemicentrotus pulcherrimus]
Length = 381
Score = 42.0 bits (97), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 16/18 (88%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRKRER
Sbjct: 140 RVQVWFQNRRAKWRKRER 157
>gi|221121999|ref|XP_002163595.1| PREDICTED: retinal homeobox protein Rax-like [Hydra magnipapillata]
Length = 270
Score = 42.0 bits (97), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 32/48 (66%), Gaps = 10/48 (20%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRER-----NAMNAAAAAAVDF 40
E +AL L RV+VWF+NRRAKWRKRE+ + N+ ++A+++
Sbjct: 102 ENLALKLDLSEARVQVWFQNRRAKWRKREKLSFGNSPSNSVCSSAIEY 149
>gi|148233818|ref|NP_001082826.1| aristaless-like homeobox 4 [Danio rerio]
gi|134025313|gb|AAI35030.1| Zgc:162606 protein [Danio rerio]
Length = 364
Score = 42.0 bits (97), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 16/18 (88%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRKRER
Sbjct: 214 RVQVWFQNRRAKWRKRER 231
>gi|47551253|ref|NP_999809.1| aristaless-like homeobox protein [Strongylocentrotus purpuratus]
gi|30841695|gb|AAP34698.1| aristaless-like homeobox protein [Strongylocentrotus purpuratus]
Length = 430
Score = 42.0 bits (97), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 16/18 (88%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRKRER
Sbjct: 161 RVQVWFQNRRAKWRKRER 178
>gi|410908185|ref|XP_003967571.1| PREDICTED: homeobox protein aristaless-like 4-like [Takifugu
rubripes]
Length = 365
Score = 42.0 bits (97), Expect = 0.043, Method: Composition-based stats.
Identities = 16/18 (88%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRKRER
Sbjct: 214 RVQVWFQNRRAKWRKRER 231
>gi|13774326|gb|AAK38835.1| aristaless-like homeobox 4 [Homo sapiens]
Length = 411
Score = 42.0 bits (97), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 16/18 (88%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRKRER
Sbjct: 257 RVQVWFQNRRAKWRKRER 274
>gi|11125350|emb|CAC15060.1| homeodomain transcription factor ALX4 [Homo sapiens]
Length = 411
Score = 42.0 bits (97), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 16/18 (88%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRKRER
Sbjct: 257 RVQVWFQNRRAKWRKRER 274
>gi|17536615|ref|NP_496138.1| Protein UNC-4 [Caenorhabditis elegans]
gi|1174878|sp|P29506.2|UNC4_CAEEL RecName: Full=Homeobox protein unc-4; AltName: Full=Homeobox
protein ceh-4; AltName: Full=Uncoordinated protein 4
gi|3876444|emb|CAA87368.1| Protein UNC-4 [Caenorhabditis elegans]
Length = 252
Score = 42.0 bits (97), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 35/61 (57%), Gaps = 9/61 (14%)
Query: 1 MGELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTF 55
M E +A+ L RV+VWF+NRRAKWRKRE+N N ++ D T+ + TF
Sbjct: 117 MREALAMRLDLLESRVQVWFQNRRAKWRKREQN-RNGSSEIKKDDGEQMETK---ALPTF 172
Query: 56 P 56
P
Sbjct: 173 P 173
>gi|379697616|dbj|BAL70317.1| reversed polarity [Camponotus japonicus]
Length = 450
Score = 42.0 bits (97), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 28/45 (62%), Gaps = 3/45 (6%)
Query: 10 RVRVWFKNRRAKWRKRE---RNAMNAAAAAAVDFKNGFSTQFNGL 51
RV+VWF+NRRAKWRK+E + AA +A+ F++ N L
Sbjct: 204 RVQVWFQNRRAKWRKKEPPRKTPYMAAGSASPGLSGSFTSLNNSL 248
>gi|410908673|ref|XP_003967815.1| PREDICTED: ALX homeobox protein 1-like [Takifugu rubripes]
Length = 320
Score = 42.0 bits (97), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 29/51 (56%), Gaps = 8/51 (15%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPDTDS 60
RV+VWF+NRRAKWRKRER A K F+ ++ + P TDS
Sbjct: 162 RVQVWFQNRRAKWRKRERYGQIQQA------KTHFAATYD--LSVLPRTDS 204
>gi|71892442|ref|NP_001025475.1| homeobox protein aristaless-like 4 [Bos taurus]
gi|109940203|sp|Q4LAL6.1|ALX4_BOVIN RecName: Full=Homeobox protein aristaless-like 4
gi|70561331|emb|CAJ14976.1| aristaless-like homeobox 4 [Bos taurus]
Length = 397
Score = 42.0 bits (97), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 16/18 (88%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRKRER
Sbjct: 243 RVQVWFQNRRAKWRKRER 260
>gi|351699504|gb|EHB02423.1| Homeobox protein ARX [Heterocephalus glaber]
Length = 195
Score = 42.0 bits (97), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 24/31 (77%), Gaps = 5/31 (16%)
Query: 2 GELMALWL-----RVRVWFKNRRAKWRKRER 27
GE +A+ L RV+VWF+NRRAKWRKRE+
Sbjct: 62 GEELAMRLDLTEARVQVWFQNRRAKWRKREK 92
>gi|269785265|ref|NP_001161560.1| goosecoid transcription factor [Saccoglossus kowalevskii]
gi|268054107|gb|ACY92540.1| goosecoid transcription factor [Saccoglossus kowalevskii]
Length = 116
Score = 42.0 bits (97), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 22/30 (73%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVD 39
RV VWFKNRRAKWRK++R + AAV+
Sbjct: 16 RVEVWFKNRRAKWRKQKREQQESIRRAAVE 45
>gi|194762980|ref|XP_001963612.1| GF20486 [Drosophila ananassae]
gi|190629271|gb|EDV44688.1| GF20486 [Drosophila ananassae]
Length = 731
Score = 42.0 bits (97), Expect = 0.045, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 5/73 (6%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGL-----MQTFPDTDSLYTS 64
R++VWF+NRRAK+RK+E+ A A + + NG G Q +P +++
Sbjct: 600 RIQVWFQNRRAKYRKQEKQLQKALAPSVIPSCNGMMRNIQGYSVSRGYQPYPHHNTMNRY 659
Query: 65 AYSSYNNWASKVP 77
+ AS P
Sbjct: 660 PQDLFQMGASSYP 672
>gi|45383792|ref|NP_989493.1| homeobox protein aristaless-like 4 [Gallus gallus]
gi|3661601|gb|AAC61772.1| paired type homeodomain protein [Gallus gallus]
Length = 387
Score = 42.0 bits (97), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 16/18 (88%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRKRER
Sbjct: 235 RVQVWFQNRRAKWRKRER 252
>gi|58761363|gb|AAW82380.1| orthodenticle homolog Otxb [Oikopleura dioica]
Length = 355
Score = 42.0 bits (97), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 32/44 (72%), Gaps = 5/44 (11%)
Query: 1 MGELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVD 39
M E MAL + RV+VWFKNRRAK+R+++++ N +++ +V+
Sbjct: 114 MREEMALKIGLPESRVQVWFKNRRAKFRQQQKSPKNNSSSQSVE 157
>gi|308472155|ref|XP_003098306.1| CRE-UNC-4 protein [Caenorhabditis remanei]
gi|308269154|gb|EFP13107.1| CRE-UNC-4 protein [Caenorhabditis remanei]
Length = 249
Score = 42.0 bits (97), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 25/33 (75%), Gaps = 5/33 (15%)
Query: 1 MGELMALWL-----RVRVWFKNRRAKWRKRERN 28
M E +A+ L RV+VWF+NRRAKWRKRE+N
Sbjct: 116 MREALAMRLDLLESRVQVWFQNRRAKWRKREQN 148
>gi|432901840|ref|XP_004076973.1| PREDICTED: visual system homeobox 1-like [Oryzias latipes]
Length = 229
Score = 42.0 bits (97), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 36/83 (43%), Gaps = 13/83 (15%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVD----FKNGFSTQFNGL-----MQTFPDTDS 60
R++VWF+NRRAK RK+ER + V G Q +G+ Q P
Sbjct: 106 RIQVWFQNRRAKQRKQERASRKVLRGGVVSGPRGLLGGMHIQPSGMSRQYYSQPLPHIPH 165
Query: 61 LY----TSAYSSYNNWASKVPSP 79
L T AYS + S+ P P
Sbjct: 166 LSPMLPTGAYSRHPGPVSRCPCP 188
>gi|426368049|ref|XP_004051027.1| PREDICTED: homeobox protein aristaless-like 4 [Gorilla gorilla
gorilla]
Length = 409
Score = 42.0 bits (97), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 16/18 (88%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRKRER
Sbjct: 255 RVQVWFQNRRAKWRKRER 272
>gi|403254633|ref|XP_003920066.1| PREDICTED: homeobox protein aristaless-like 4 [Saimiri boliviensis
boliviensis]
Length = 394
Score = 42.0 bits (97), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 16/18 (88%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRKRER
Sbjct: 240 RVQVWFQNRRAKWRKRER 257
>gi|119588472|gb|EAW68066.1| aristaless-like homeobox 4 [Homo sapiens]
Length = 411
Score = 42.0 bits (97), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 16/18 (88%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRKRER
Sbjct: 257 RVQVWFQNRRAKWRKRER 274
>gi|14017793|dbj|BAB47417.1| KIAA1788 protein [Homo sapiens]
Length = 413
Score = 42.0 bits (97), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 16/18 (88%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRKRER
Sbjct: 259 RVQVWFQNRRAKWRKRER 276
>gi|55743092|ref|NP_068745.2| homeobox protein aristaless-like 4 [Homo sapiens]
gi|254763249|sp|Q9H161.2|ALX4_HUMAN RecName: Full=Homeobox protein aristaless-like 4
gi|11125719|emb|CAC15120.1| homeodomain transcription factor ALX4 [Homo sapiens]
gi|168278961|dbj|BAG11360.1| aristaless-like homeobox 4 [synthetic construct]
gi|187252473|gb|AAI66622.1| ALX homeobox 4 [synthetic construct]
Length = 411
Score = 42.0 bits (97), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 16/18 (88%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRKRER
Sbjct: 257 RVQVWFQNRRAKWRKRER 274
>gi|344266437|ref|XP_003405287.1| PREDICTED: ALX homeobox protein 1 [Loxodonta africana]
Length = 326
Score = 42.0 bits (97), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 30/51 (58%), Gaps = 8/51 (15%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPDTDS 60
RV+VWF+NRRAKWRKRER A K+ F+ ++ + P TDS
Sbjct: 175 RVQVWFQNRRAKWRKRERYGQIQQA------KSHFAATYD--ISVLPRTDS 217
>gi|410973607|ref|XP_003993239.1| PREDICTED: homeobox protein aristaless-like 4 [Felis catus]
Length = 408
Score = 42.0 bits (97), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 16/18 (88%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRKRER
Sbjct: 254 RVQVWFQNRRAKWRKRER 271
>gi|402893728|ref|XP_003910041.1| PREDICTED: homeobox protein aristaless-like 4 [Papio anubis]
Length = 409
Score = 42.0 bits (97), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 16/18 (88%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRKRER
Sbjct: 255 RVQVWFQNRRAKWRKRER 272
>gi|397473637|ref|XP_003808312.1| PREDICTED: homeobox protein aristaless-like 4 [Pan paniscus]
Length = 424
Score = 42.0 bits (97), Expect = 0.047, Method: Composition-based stats.
Identities = 16/18 (88%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRKRER
Sbjct: 270 RVQVWFQNRRAKWRKRER 287
>gi|355566588|gb|EHH22967.1| Homeobox protein aristaless-like 4 [Macaca mulatta]
Length = 409
Score = 42.0 bits (97), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 16/18 (88%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRKRER
Sbjct: 255 RVQVWFQNRRAKWRKRER 272
>gi|348509621|ref|XP_003442346.1| PREDICTED: homeobox protein aristaless-like 4-like [Oreochromis
niloticus]
Length = 373
Score = 42.0 bits (97), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 16/18 (88%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRKRER
Sbjct: 222 RVQVWFQNRRAKWRKRER 239
>gi|291384886|ref|XP_002709113.1| PREDICTED: aristaless-like homeobox 4-like [Oryctolagus cuniculus]
Length = 397
Score = 42.0 bits (97), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 16/18 (88%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRKRER
Sbjct: 243 RVQVWFQNRRAKWRKRER 260
>gi|194217845|ref|XP_001915219.1| PREDICTED: hypothetical protein LOC100055958 [Equus caballus]
Length = 608
Score = 42.0 bits (97), Expect = 0.047, Method: Composition-based stats.
Identities = 16/18 (88%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRKRER
Sbjct: 454 RVQVWFQNRRAKWRKRER 471
>gi|300796276|ref|NP_001179220.1| ALX homeobox protein 1 [Bos taurus]
gi|426224245|ref|XP_004006284.1| PREDICTED: ALX homeobox protein 1 [Ovis aries]
gi|296487990|tpg|DAA30103.1| TPA: ALX homeobox protein 1-like [Bos taurus]
Length = 326
Score = 42.0 bits (97), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 30/51 (58%), Gaps = 8/51 (15%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPDTDS 60
RV+VWF+NRRAKWRKRER A K+ F+ ++ + P TDS
Sbjct: 175 RVQVWFQNRRAKWRKRERYGQIQQA------KSHFAATYD--ISVLPRTDS 217
>gi|109106654|ref|XP_001113643.1| PREDICTED: homeobox protein aristaless-like 4-like [Macaca mulatta]
Length = 409
Score = 42.0 bits (97), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 16/18 (88%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRKRER
Sbjct: 255 RVQVWFQNRRAKWRKRER 272
>gi|440898843|gb|ELR50257.1| ALX homeobox protein 1 [Bos grunniens mutus]
Length = 326
Score = 42.0 bits (97), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 30/51 (58%), Gaps = 8/51 (15%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPDTDS 60
RV+VWF+NRRAKWRKRER A K+ F+ ++ + P TDS
Sbjct: 175 RVQVWFQNRRAKWRKRERYGQIQQA------KSHFAATYD--ISVLPRTDS 217
>gi|73982544|ref|XP_850737.1| PREDICTED: ALX homeobox 4 isoform 1 [Canis lupus familiaris]
Length = 414
Score = 42.0 bits (97), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 16/18 (88%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRKRER
Sbjct: 260 RVQVWFQNRRAKWRKRER 277
>gi|395744635|ref|XP_002823601.2| PREDICTED: ALX homeobox protein 1-like, partial [Pongo abelii]
Length = 220
Score = 42.0 bits (97), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 30/51 (58%), Gaps = 8/51 (15%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPDTDS 60
RV+VWF+NRRAKWRKRER A K+ F+ ++ + P TDS
Sbjct: 175 RVQVWFQNRRAKWRKRERYGQIQQA------KSHFAATYD--ISVLPRTDS 217
>gi|354491350|ref|XP_003507818.1| PREDICTED: homeobox protein aristaless-like 4-like [Cricetulus
griseus]
Length = 319
Score = 42.0 bits (97), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 16/18 (88%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRKRER
Sbjct: 165 RVQVWFQNRRAKWRKRER 182
>gi|6671541|ref|NP_031468.1| homeobox protein aristaless-like 4 [Mus musculus]
gi|13626102|sp|O35137.1|ALX4_MOUSE RecName: Full=Homeobox protein aristaless-like 4; AltName:
Full=ALX-4
gi|2352266|gb|AAC39943.1| paired-type homeodomain transcription factor [Mus musculus]
gi|148695681|gb|EDL27628.1| aristaless 4 [Mus musculus]
Length = 399
Score = 42.0 bits (97), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 16/18 (88%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRKRER
Sbjct: 245 RVQVWFQNRRAKWRKRER 262
>gi|10863749|gb|AAG23961.1|AF294629_1 aristaless-like 4 [Homo sapiens]
Length = 410
Score = 42.0 bits (97), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 16/18 (88%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRKRER
Sbjct: 257 RVQVWFQNRRAKWRKRER 274
>gi|340730425|gb|AEK64853.1| aristaless-like homeobox 4 protein [Xenopus (Silurana) tropicalis]
Length = 321
Score = 42.0 bits (97), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 16/18 (88%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRKRER
Sbjct: 169 RVQVWFQNRRAKWRKRER 186
>gi|311256745|ref|XP_003126788.1| PREDICTED: ALX homeobox protein 1 [Sus scrofa]
Length = 326
Score = 42.0 bits (97), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 30/51 (58%), Gaps = 8/51 (15%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPDTDS 60
RV+VWF+NRRAKWRKRER A K+ F+ ++ + P TDS
Sbjct: 175 RVQVWFQNRRAKWRKRERYGQIQQA------KSHFAATYD--ISVLPRTDS 217
>gi|157818677|ref|NP_001100023.1| homeobox protein aristaless-like 4 [Rattus norvegicus]
gi|149022700|gb|EDL79594.1| aristaless 4 (predicted) [Rattus norvegicus]
Length = 399
Score = 42.0 bits (97), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 16/18 (88%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRKRER
Sbjct: 245 RVQVWFQNRRAKWRKRER 262
>gi|395820130|ref|XP_003783428.1| PREDICTED: ALX homeobox protein 1 [Otolemur garnettii]
Length = 326
Score = 42.0 bits (97), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 30/51 (58%), Gaps = 8/51 (15%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPDTDS 60
RV+VWF+NRRAKWRKRER A K+ F+ ++ + P TDS
Sbjct: 175 RVQVWFQNRRAKWRKRERYGQIQQA------KSHFAATYD--ISVLPRTDS 217
>gi|355564508|gb|EHH21008.1| Cartilage homeoprotein 1 [Macaca mulatta]
Length = 326
Score = 42.0 bits (97), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 30/51 (58%), Gaps = 8/51 (15%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPDTDS 60
RV+VWF+NRRAKWRKRER A K+ F+ ++ + P TDS
Sbjct: 175 RVQVWFQNRRAKWRKRERYGQIQQA------KSHFAATYD--ISVLPRTDS 217
>gi|291389679|ref|XP_002711420.1| PREDICTED: cartilage paired-class homeoprotein 1 [Oryctolagus
cuniculus]
Length = 326
Score = 42.0 bits (97), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 30/51 (58%), Gaps = 8/51 (15%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPDTDS 60
RV+VWF+NRRAKWRKRER A K+ F+ ++ + P TDS
Sbjct: 175 RVQVWFQNRRAKWRKRERYGQIQQA------KSHFAATYD--ISVLPRTDS 217
>gi|126332676|ref|XP_001368029.1| PREDICTED: homeobox protein aristaless-like 4-like [Monodelphis
domestica]
Length = 417
Score = 42.0 bits (97), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 16/18 (88%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRKRER
Sbjct: 264 RVQVWFQNRRAKWRKRER 281
>gi|395815567|ref|XP_003781297.1| PREDICTED: homeobox protein aristaless-like 4 [Otolemur garnettii]
Length = 407
Score = 42.0 bits (97), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 16/18 (88%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRKRER
Sbjct: 255 RVQVWFQNRRAKWRKRER 272
>gi|344281094|ref|XP_003412315.1| PREDICTED: homeobox protein aristaless-like 4-like [Loxodonta
africana]
Length = 406
Score = 42.0 bits (97), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 16/18 (88%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRKRER
Sbjct: 252 RVQVWFQNRRAKWRKRER 269
>gi|397497244|ref|XP_003819424.1| PREDICTED: retina and anterior neural fold homeobox protein 2 [Pan
paniscus]
Length = 211
Score = 42.0 bits (97), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 25/40 (62%)
Query: 9 LRVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQF 48
+RV+VWF+NRRAKWR++ER + A AA + F
Sbjct: 69 VRVQVWFQNRRAKWRRQERLESGSGAVAAPRLPEAPALPF 108
>gi|440897881|gb|ELR49486.1| Homeobox protein aristaless-like 4, partial [Bos grunniens mutus]
Length = 385
Score = 42.0 bits (97), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 16/18 (88%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRKRER
Sbjct: 231 RVQVWFQNRRAKWRKRER 248
>gi|42601333|gb|AAS21360.1| aristaless related homeobox protein [Oikopleura dioica]
Length = 293
Score = 42.0 bits (97), Expect = 0.050, Method: Composition-based stats.
Identities = 15/19 (78%), Positives = 19/19 (100%)
Query: 10 RVRVWFKNRRAKWRKRERN 28
RV+VWF+NRRAKWRKRE++
Sbjct: 169 RVQVWFQNRRAKWRKREKH 187
>gi|410965202|ref|XP_003989139.1| PREDICTED: ALX homeobox protein 1 [Felis catus]
Length = 326
Score = 42.0 bits (97), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 30/51 (58%), Gaps = 8/51 (15%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPDTDS 60
RV+VWF+NRRAKWRKRER A K+ F+ ++ + P TDS
Sbjct: 175 RVQVWFQNRRAKWRKRERYGQIQQA------KSHFAATYD--ISVLPRTDS 217
>gi|194226627|ref|XP_001493780.2| PREDICTED: ALX homeobox protein 1 [Equus caballus]
Length = 326
Score = 42.0 bits (97), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 30/51 (58%), Gaps = 8/51 (15%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPDTDS 60
RV+VWF+NRRAKWRKRER A K+ F+ ++ + P TDS
Sbjct: 175 RVQVWFQNRRAKWRKRERYGQIQQA------KSHFAATYD--ISVLPRTDS 217
>gi|313224351|emb|CBY20140.1| unnamed protein product [Oikopleura dioica]
Length = 291
Score = 42.0 bits (97), Expect = 0.050, Method: Composition-based stats.
Identities = 15/19 (78%), Positives = 19/19 (100%)
Query: 10 RVRVWFKNRRAKWRKRERN 28
RV+VWF+NRRAKWRKRE++
Sbjct: 169 RVQVWFQNRRAKWRKREKH 187
>gi|307171474|gb|EFN63318.1| Aristaless-related homeobox protein [Camponotus floridanus]
Length = 453
Score = 42.0 bits (97), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 28/45 (62%), Gaps = 3/45 (6%)
Query: 10 RVRVWFKNRRAKWRKRE---RNAMNAAAAAAVDFKNGFSTQFNGL 51
RV+VWF+NRRAKWRK+E + AA +A+ F++ N L
Sbjct: 205 RVQVWFQNRRAKWRKKEPPRKTPYMAAGSASPGLSGSFTSLNNSL 249
>gi|68369878|ref|XP_695330.1| PREDICTED: homeobox protein aristaless-like 3-like [Danio rerio]
Length = 363
Score = 42.0 bits (97), Expect = 0.050, Method: Composition-based stats.
Identities = 16/18 (88%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRKRER
Sbjct: 197 RVQVWFQNRRAKWRKRER 214
>gi|402886991|ref|XP_003906892.1| PREDICTED: ALX homeobox protein 1 [Papio anubis]
gi|355786349|gb|EHH66532.1| Cartilage homeoprotein 1 [Macaca fascicularis]
Length = 326
Score = 42.0 bits (97), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 30/51 (58%), Gaps = 8/51 (15%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPDTDS 60
RV+VWF+NRRAKWRKRER A K+ F+ ++ + P TDS
Sbjct: 175 RVQVWFQNRRAKWRKRERYGQIQQA------KSHFAATYD--ISVLPRTDS 217
>gi|332221029|ref|XP_003259660.1| PREDICTED: ALX homeobox protein 1 [Nomascus leucogenys]
Length = 326
Score = 42.0 bits (97), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 30/51 (58%), Gaps = 8/51 (15%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPDTDS 60
RV+VWF+NRRAKWRKRER A K+ F+ ++ + P TDS
Sbjct: 175 RVQVWFQNRRAKWRKRERYGQIQQA------KSHFAATYD--ISVLPRTDS 217
>gi|405972244|gb|EKC37023.1| Retinal homeobox protein Rx [Crassostrea gigas]
Length = 987
Score = 42.0 bits (97), Expect = 0.051, Method: Composition-based stats.
Identities = 15/19 (78%), Positives = 19/19 (100%)
Query: 10 RVRVWFKNRRAKWRKRERN 28
RV+VWF+NRRAKWRK+E+N
Sbjct: 109 RVQVWFQNRRAKWRKQEKN 127
>gi|403272040|ref|XP_003927898.1| PREDICTED: ALX homeobox protein 1 [Saimiri boliviensis boliviensis]
Length = 326
Score = 42.0 bits (97), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 30/51 (58%), Gaps = 8/51 (15%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPDTDS 60
RV+VWF+NRRAKWRKRER A K+ F+ ++ + P TDS
Sbjct: 175 RVQVWFQNRRAKWRKRERYGQIQQA------KSHFAATYD--ISVLPRTDS 217
>gi|354488799|ref|XP_003506553.1| PREDICTED: ALX homeobox protein 1 [Cricetulus griseus]
Length = 326
Score = 42.0 bits (97), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 30/51 (58%), Gaps = 8/51 (15%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPDTDS 60
RV+VWF+NRRAKWRKRER A K+ F+ ++ + P TDS
Sbjct: 175 RVQVWFQNRRAKWRKRERYGQIQQA------KSHFAATYD--ISVLPRTDS 217
>gi|297263080|ref|XP_001088435.2| PREDICTED: ALX homeobox protein 1-like [Macaca mulatta]
Length = 365
Score = 42.0 bits (97), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 30/51 (58%), Gaps = 8/51 (15%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPDTDS 60
RV+VWF+NRRAKWRKRER A K+ F+ ++ + P TDS
Sbjct: 214 RVQVWFQNRRAKWRKRERYGQIQQA------KSHFAATYD--ISVLPRTDS 256
>gi|351706553|gb|EHB09472.1| ALX homeobox protein 1 [Heterocephalus glaber]
Length = 327
Score = 42.0 bits (97), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 30/51 (58%), Gaps = 8/51 (15%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPDTDS 60
RV+VWF+NRRAKWRKRER A K+ F+ ++ + P TDS
Sbjct: 176 RVQVWFQNRRAKWRKRERYGQIQQA------KSHFAATYD--ISVLPRTDS 218
>gi|296212490|ref|XP_002752854.1| PREDICTED: ALX homeobox protein 1 [Callithrix jacchus]
Length = 326
Score = 42.0 bits (97), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 30/51 (58%), Gaps = 8/51 (15%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPDTDS 60
RV+VWF+NRRAKWRKRER A K+ F+ ++ + P TDS
Sbjct: 175 RVQVWFQNRRAKWRKRERYGQIQQA------KSHFAATYD--ISVLPRTDS 217
>gi|431892095|gb|ELK02542.1| ALX homeobox protein 1 [Pteropus alecto]
Length = 326
Score = 42.0 bits (97), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 30/51 (58%), Gaps = 8/51 (15%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPDTDS 60
RV+VWF+NRRAKWRKRER A K+ F+ ++ + P TDS
Sbjct: 175 RVQVWFQNRRAKWRKRERYGQIQQA------KSHFAATYD--ISVLPRTDS 217
>gi|1098654|gb|AAB08960.1| Cart-1 [Homo sapiens]
Length = 326
Score = 42.0 bits (97), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 30/51 (58%), Gaps = 8/51 (15%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPDTDS 60
RV+VWF+NRRAKWRKRER A K+ F+ ++ + P TDS
Sbjct: 175 RVQVWFQNRRAKWRKRERYGQIQQA------KSHFAATYD--ISVLPRTDS 217
>gi|154813201|ref|NP_008913.2| ALX homeobox protein 1 [Homo sapiens]
gi|114646088|ref|XP_509250.2| PREDICTED: ALX homeobox protein 1 [Pan troglodytes]
gi|397480872|ref|XP_003811689.1| PREDICTED: ALX homeobox protein 1 [Pan paniscus]
gi|90111820|sp|Q15699.2|ALX1_HUMAN RecName: Full=ALX homeobox protein 1; AltName: Full=Cartilage
homeoprotein 1; Short=CART-1
gi|15012050|gb|AAH10923.1| ALX homeobox 1 [Homo sapiens]
gi|46946691|emb|CAD90155.1| cartilage paired-class homeoprotein 1 [Homo sapiens]
gi|61363409|gb|AAX42385.1| cartilage paired-class homeoprotein 1 [synthetic construct]
gi|119617804|gb|EAW97398.1| cartilage paired-class homeoprotein 1 [Homo sapiens]
Length = 326
Score = 42.0 bits (97), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 30/51 (58%), Gaps = 8/51 (15%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPDTDS 60
RV+VWF+NRRAKWRKRER A K+ F+ ++ + P TDS
Sbjct: 175 RVQVWFQNRRAKWRKRERYGQIQQA------KSHFAATYD--ISVLPRTDS 217
>gi|301782565|ref|XP_002926696.1| PREDICTED: ALX homeobox protein 1-like [Ailuropoda melanoleuca]
gi|281346099|gb|EFB21683.1| hypothetical protein PANDA_016388 [Ailuropoda melanoleuca]
Length = 326
Score = 42.0 bits (97), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 30/51 (58%), Gaps = 8/51 (15%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPDTDS 60
RV+VWF+NRRAKWRKRER A K+ F+ ++ + P TDS
Sbjct: 175 RVQVWFQNRRAKWRKRERYGQIQQA------KSHFAATYD--ISVLPRTDS 217
>gi|195346245|ref|XP_002039676.1| GM15768 [Drosophila sechellia]
gi|194135025|gb|EDW56541.1| GM15768 [Drosophila sechellia]
Length = 407
Score = 42.0 bits (97), Expect = 0.052, Method: Composition-based stats.
Identities = 15/18 (83%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRKRE+
Sbjct: 194 RVQVWFQNRRAKWRKREK 211
>gi|6978601|ref|NP_037053.1| ALX homeobox protein 1 [Rattus norvegicus]
gi|3023581|sp|Q63087.1|ALX1_RAT RecName: Full=ALX homeobox protein 1; AltName: Full=Cartilage
homeoprotein 1; Short=CART-1
gi|413751|gb|AAA40877.1| homeoprotein 1 [Rattus norvegicus]
gi|149067054|gb|EDM16787.1| cartilage homeo protein 1, isoform CRA_a [Rattus norvegicus]
gi|149067055|gb|EDM16788.1| cartilage homeo protein 1, isoform CRA_a [Rattus norvegicus]
gi|165970652|gb|AAI58592.1| ALX homeobox 1 [Rattus norvegicus]
Length = 326
Score = 42.0 bits (97), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 30/51 (58%), Gaps = 8/51 (15%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPDTDS 60
RV+VWF+NRRAKWRKRER A K+ F+ ++ + P TDS
Sbjct: 175 RVQVWFQNRRAKWRKRERYGQIQQA------KSHFAATYD--ISVLPRTDS 217
>gi|348580359|ref|XP_003475946.1| PREDICTED: ALX homeobox protein 1-like [Cavia porcellus]
Length = 353
Score = 42.0 bits (97), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 30/51 (58%), Gaps = 8/51 (15%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPDTDS 60
RV+VWF+NRRAKWRKRER A K+ F+ ++ + P TDS
Sbjct: 202 RVQVWFQNRRAKWRKRERYGQIQQA------KSHFAATYD--ISVLPRTDS 244
>gi|194881732|ref|XP_001974975.1| GG20821 [Drosophila erecta]
gi|190658162|gb|EDV55375.1| GG20821 [Drosophila erecta]
Length = 416
Score = 41.6 bits (96), Expect = 0.053, Method: Composition-based stats.
Identities = 15/18 (83%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRKRE+
Sbjct: 203 RVQVWFQNRRAKWRKREK 220
>gi|27369774|ref|NP_766141.1| ALX homeobox protein 1 [Mus musculus]
gi|67460551|sp|Q8C8B0.1|ALX1_MOUSE RecName: Full=ALX homeobox protein 1; AltName: Full=Cartilage
homeoprotein 1; Short=CART-1
gi|26339004|dbj|BAC33173.1| unnamed protein product [Mus musculus]
gi|30353921|gb|AAH52200.1| ALX homeobox 1 [Mus musculus]
gi|148689727|gb|EDL21674.1| cartilage homeo protein 1 [Mus musculus]
Length = 326
Score = 41.6 bits (96), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 30/51 (58%), Gaps = 8/51 (15%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPDTDS 60
RV+VWF+NRRAKWRKRER A K+ F+ ++ + P TDS
Sbjct: 175 RVQVWFQNRRAKWRKRERYGQIQQA------KSHFAATYD--ISVLPRTDS 217
>gi|297275793|ref|XP_002801073.1| PREDICTED: retina and anterior neural fold homeobox protein 2-like
[Macaca mulatta]
gi|402903739|ref|XP_003914716.1| PREDICTED: retina and anterior neural fold homeobox protein 2
[Papio anubis]
Length = 230
Score = 41.6 bits (96), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 25/40 (62%)
Query: 9 LRVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQF 48
+RV+VWF+NRRAKWR++ER + A AA + F
Sbjct: 115 VRVQVWFQNRRAKWRRQERLESGSGAVAAPRLPEAPALPF 154
>gi|195059442|ref|XP_001995638.1| GH17865 [Drosophila grimshawi]
gi|193896424|gb|EDV95290.1| GH17865 [Drosophila grimshawi]
Length = 711
Score = 41.6 bits (96), Expect = 0.055, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 5/73 (6%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGL-----MQTFPDTDSLYTS 64
R++VWF+NRRAK+RK+E+ A A + + NG G Q +P +++
Sbjct: 540 RIQVWFQNRRAKYRKQEKQLQKALAPSVIPSCNGMMRNIQGYSVSRGYQPYPHHNTMNRY 599
Query: 65 AYSSYNNWASKVP 77
+ AS P
Sbjct: 600 PQDLFQMGASSYP 612
>gi|432866185|ref|XP_004070727.1| PREDICTED: homeobox protein aristaless-like 3-like [Oryzias
latipes]
Length = 369
Score = 41.6 bits (96), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 16/18 (88%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRKRER
Sbjct: 213 RVQVWFQNRRAKWRKRER 230
>gi|405951906|gb|EKC19775.1| Dorsal root ganglia homeobox protein [Crassostrea gigas]
Length = 492
Score = 41.6 bits (96), Expect = 0.055, Method: Composition-based stats.
Identities = 16/27 (59%), Positives = 20/27 (74%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAA 36
RV+VWF+NRRAKWRK ER + + A
Sbjct: 141 RVQVWFQNRRAKWRKSERFTQQSKSGA 167
>gi|224094163|ref|XP_002196043.1| PREDICTED: ALX homeobox protein 1 [Taeniopygia guttata]
Length = 328
Score = 41.6 bits (96), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 30/51 (58%), Gaps = 8/51 (15%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPDTDS 60
RV+VWF+NRRAKWRKRER A K+ F+ ++ + P TDS
Sbjct: 177 RVQVWFQNRRAKWRKRERYGQIQQA------KSHFAATYD--ISVLPRTDS 219
>gi|195486706|ref|XP_002091619.1| GE13762 [Drosophila yakuba]
gi|194177720|gb|EDW91331.1| GE13762 [Drosophila yakuba]
Length = 412
Score = 41.6 bits (96), Expect = 0.055, Method: Composition-based stats.
Identities = 15/18 (83%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRKRE+
Sbjct: 199 RVQVWFQNRRAKWRKREK 216
>gi|26352187|dbj|BAC39730.1| unnamed protein product [Mus musculus]
Length = 320
Score = 41.6 bits (96), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 30/51 (58%), Gaps = 8/51 (15%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPDTDS 60
RV+VWF+NRRAKWRKRER A K+ F+ ++ + P TDS
Sbjct: 169 RVQVWFQNRRAKWRKRERYGQIQQA------KSHFAATYD--ISVLPRTDS 211
>gi|324511371|gb|ADY44739.1| Aristaless-related homeobox protein [Ascaris suum]
Length = 487
Score = 41.6 bits (96), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 15/20 (75%), Positives = 19/20 (95%)
Query: 10 RVRVWFKNRRAKWRKRERNA 29
RV+VWF+NRRAKWRK+ER +
Sbjct: 216 RVQVWFQNRRAKWRKQERTS 235
>gi|296232532|ref|XP_002761628.1| PREDICTED: retina and anterior neural fold homeobox protein 2
[Callithrix jacchus]
Length = 227
Score = 41.6 bits (96), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 25/40 (62%)
Query: 9 LRVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQF 48
+RV+VWF+NRRAKWR++ER + A AA + F
Sbjct: 112 VRVQVWFQNRRAKWRRQERLESGSGAVAAPRLPEAPALPF 151
>gi|195448076|ref|XP_002071499.1| GK25107 [Drosophila willistoni]
gi|194167584|gb|EDW82485.1| GK25107 [Drosophila willistoni]
Length = 638
Score = 41.6 bits (96), Expect = 0.056, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 5/73 (6%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGL-----MQTFPDTDSLYTS 64
R++VWF+NRRAK+RK+E+ A A + + NG G Q +P +++
Sbjct: 507 RIQVWFQNRRAKYRKQEKQLQKALAPSVIPSCNGMMRNIQGYSVSRGYQPYPHHNTMNRY 566
Query: 65 AYSSYNNWASKVP 77
+ AS P
Sbjct: 567 PQDLFQMGASSYP 579
>gi|363743158|ref|XP_003642783.1| PREDICTED: homeobox protein aristaless-like 3-like [Gallus gallus]
Length = 261
Score = 41.6 bits (96), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 16/18 (88%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRKRER
Sbjct: 118 RVQVWFQNRRAKWRKRER 135
>gi|402594071|gb|EJW87998.1| hypothetical protein WUBG_01089, partial [Wuchereria bancrofti]
Length = 286
Score = 41.6 bits (96), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFP 56
RV+VWF+NRRAKWRK+ER + A + + LMQT P
Sbjct: 232 RVQVWFQNRRAKWRKQERTS--AVHPYGHTTSHHVPRTSHPLMQTHP 276
>gi|344252001|gb|EGW08105.1| ALX homeobox protein 1 [Cricetulus griseus]
Length = 295
Score = 41.6 bits (96), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 30/51 (58%), Gaps = 8/51 (15%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPDTDS 60
RV+VWF+NRRAKWRKRER A K+ F+ ++ + P TDS
Sbjct: 144 RVQVWFQNRRAKWRKRERYGQIQQA------KSHFAATYD--ISVLPRTDS 186
>gi|149638014|ref|XP_001513012.1| PREDICTED: ALX homeobox protein 1 [Ornithorhynchus anatinus]
Length = 326
Score = 41.6 bits (96), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 30/51 (58%), Gaps = 8/51 (15%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPDTDS 60
RV+VWF+NRRAKWRKRER A K+ F+ ++ + P TDS
Sbjct: 175 RVQVWFQNRRAKWRKRERYGQIQQA------KSHFAATYD--ISVLPRTDS 217
>gi|9945022|gb|AAG03082.1|AF295531_1 aristaless-like protein [Hydra vulgaris]
Length = 271
Score = 41.6 bits (96), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 32/49 (65%), Gaps = 11/49 (22%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRER------NAMNAAAAAAVDF 40
E +AL L RV+VWF+NRRAKWRKRE+ + N+ ++A+++
Sbjct: 102 ENLALKLDLSEARVQVWFQNRRAKWRKREKVMQFGNSPSNSVCSSAIEY 150
>gi|258503883|gb|ACV72678.1| UNC-4 [Caenorhabditis remanei]
gi|258503887|gb|ACV72680.1| UNC-4 [Caenorhabditis remanei]
gi|258503889|gb|ACV72681.1| UNC-4 [Caenorhabditis remanei]
gi|258503893|gb|ACV72683.1| UNC-4 [Caenorhabditis remanei]
Length = 223
Score = 41.6 bits (96), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 25/33 (75%), Gaps = 5/33 (15%)
Query: 1 MGELMALWL-----RVRVWFKNRRAKWRKRERN 28
M E +A+ L RV+VWF+NRRAKWRKRE+N
Sbjct: 108 MREALAMRLDLLESRVQVWFQNRRAKWRKREQN 140
>gi|195032847|ref|XP_001988573.1| GH11236 [Drosophila grimshawi]
gi|193904573|gb|EDW03440.1| GH11236 [Drosophila grimshawi]
Length = 372
Score = 41.6 bits (96), Expect = 0.059, Method: Composition-based stats.
Identities = 18/40 (45%), Positives = 24/40 (60%), Gaps = 7/40 (17%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFN 49
RV+VWF+NRRAKWRK+E+ D+K+G N
Sbjct: 48 RVQVWFQNRRAKWRKQEK-------IGGADYKDGSGLDLN 80
>gi|395742860|ref|XP_002821892.2| PREDICTED: LOW QUALITY PROTEIN: homeobox protein aristaless-like 4
[Pongo abelii]
Length = 407
Score = 41.6 bits (96), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 16/18 (88%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRKRER
Sbjct: 254 RVQVWFQNRRAKWRKRER 271
>gi|335282410|ref|XP_003354059.1| PREDICTED: retina and anterior neural fold homeobox protein 2-like
[Sus scrofa]
Length = 203
Score = 41.6 bits (96), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 25/40 (62%)
Query: 9 LRVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQF 48
+RV+VWF+NRRAKWR++ER + A AA + F
Sbjct: 88 VRVQVWFQNRRAKWRRQERLESGSGAVAAPRLPEAPALPF 127
>gi|258503879|gb|ACV72676.1| UNC-4 [Caenorhabditis remanei]
gi|258503895|gb|ACV72684.1| UNC-4 [Caenorhabditis remanei]
gi|258503899|gb|ACV72686.1| UNC-4 [Caenorhabditis remanei]
gi|258503901|gb|ACV72687.1| UNC-4 [Caenorhabditis remanei]
Length = 223
Score = 41.6 bits (96), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 25/33 (75%), Gaps = 5/33 (15%)
Query: 1 MGELMALWL-----RVRVWFKNRRAKWRKRERN 28
M E +A+ L RV+VWF+NRRAKWRKRE+N
Sbjct: 108 MREALAMRLDLLESRVQVWFQNRRAKWRKREQN 140
>gi|258503871|gb|ACV72672.1| UNC-4 [Caenorhabditis remanei]
Length = 223
Score = 41.6 bits (96), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 25/33 (75%), Gaps = 5/33 (15%)
Query: 1 MGELMALWL-----RVRVWFKNRRAKWRKRERN 28
M E +A+ L RV+VWF+NRRAKWRKRE+N
Sbjct: 108 MREALAMRLDLLESRVQVWFQNRRAKWRKREQN 140
>gi|170059587|ref|XP_001865428.1| paired box protein [Culex quinquefasciatus]
gi|167878294|gb|EDS41677.1| paired box protein [Culex quinquefasciatus]
Length = 340
Score = 41.6 bits (96), Expect = 0.059, Method: Composition-based stats.
Identities = 19/34 (55%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNG 43
RV+VWF+NRRAKWRKRE+ AM +A + G
Sbjct: 172 RVQVWFQNRRAKWRKREK-AMGRDTSAFLHHDQG 204
>gi|119589694|gb|EAW69288.1| retina and anterior neural fold homeobox like 1 [Homo sapiens]
Length = 230
Score = 41.6 bits (96), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 25/40 (62%)
Query: 9 LRVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQF 48
+RV+VWF+NRRAKWR++ER + A AA + F
Sbjct: 115 VRVQVWFQNRRAKWRRQERLESGSGAVAAPRLPEAPALPF 154
>gi|170587125|ref|XP_001898329.1| Homeobox domain containing protein [Brugia malayi]
gi|158594235|gb|EDP32820.1| Homeobox domain containing protein [Brugia malayi]
Length = 516
Score = 41.6 bits (96), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 15/20 (75%), Positives = 19/20 (95%)
Query: 10 RVRVWFKNRRAKWRKRERNA 29
RV+VWF+NRRAKWRK+ER +
Sbjct: 233 RVQVWFQNRRAKWRKQERTS 252
>gi|258503877|gb|ACV72675.1| UNC-4 [Caenorhabditis remanei]
gi|258503881|gb|ACV72677.1| UNC-4 [Caenorhabditis remanei]
Length = 223
Score = 41.6 bits (96), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 25/33 (75%), Gaps = 5/33 (15%)
Query: 1 MGELMALWL-----RVRVWFKNRRAKWRKRERN 28
M E +A+ L RV+VWF+NRRAKWRKRE+N
Sbjct: 108 MREALAMRLDLLESRVQVWFQNRRAKWRKREQN 140
>gi|198458250|ref|XP_001360969.2| GA17327 [Drosophila pseudoobscura pseudoobscura]
gi|198136274|gb|EAL25545.2| GA17327 [Drosophila pseudoobscura pseudoobscura]
Length = 404
Score = 41.6 bits (96), Expect = 0.061, Method: Composition-based stats.
Identities = 15/18 (83%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRKRE+
Sbjct: 188 RVQVWFQNRRAKWRKREK 205
>gi|195066771|ref|XP_001996841.1| GH11036 [Drosophila grimshawi]
gi|193891514|gb|EDV90380.1| GH11036 [Drosophila grimshawi]
Length = 372
Score = 41.6 bits (96), Expect = 0.061, Method: Composition-based stats.
Identities = 18/40 (45%), Positives = 24/40 (60%), Gaps = 7/40 (17%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFN 49
RV+VWF+NRRAKWRK+E+ D+K+G N
Sbjct: 48 RVQVWFQNRRAKWRKQEK-------IGGADYKDGSGLDLN 80
>gi|292628755|ref|XP_002667096.1| PREDICTED: aristaless-related homeobox protein-like [Danio rerio]
Length = 385
Score = 41.6 bits (96), Expect = 0.061, Method: Composition-based stats.
Identities = 15/18 (83%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRKRE+
Sbjct: 205 RVQVWFQNRRAKWRKREK 222
>gi|426230726|ref|XP_004009413.1| PREDICTED: retina and anterior neural fold homeobox protein 2 [Ovis
aries]
Length = 188
Score = 41.6 bits (96), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 25/40 (62%)
Query: 9 LRVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQF 48
+RV+VWF+NRRAKWR++ER + A AA + F
Sbjct: 83 VRVQVWFQNRRAKWRRQERLESGSGAVAAPRLPEAPALPF 122
>gi|260801389|ref|XP_002595578.1| uncoordinated-4c [Branchiostoma floridae]
gi|229280825|gb|EEN51590.1| uncoordinated-4c [Branchiostoma floridae]
Length = 245
Score = 41.6 bits (96), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 20/32 (62%), Positives = 24/32 (75%), Gaps = 5/32 (15%)
Query: 1 MGELMALWL-----RVRVWFKNRRAKWRKRER 27
M E +AL L RV+VWF+NRRAKWRK+ER
Sbjct: 98 MREALALRLDLMESRVQVWFQNRRAKWRKQER 129
>gi|195153954|ref|XP_002017888.1| GL17416 [Drosophila persimilis]
gi|194113684|gb|EDW35727.1| GL17416 [Drosophila persimilis]
Length = 401
Score = 41.6 bits (96), Expect = 0.062, Method: Composition-based stats.
Identities = 15/18 (83%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRKRE+
Sbjct: 185 RVQVWFQNRRAKWRKREK 202
>gi|258503873|gb|ACV72673.1| UNC-4 [Caenorhabditis remanei]
gi|258503875|gb|ACV72674.1| UNC-4 [Caenorhabditis remanei]
gi|258503885|gb|ACV72679.1| UNC-4 [Caenorhabditis remanei]
gi|258503891|gb|ACV72682.1| UNC-4 [Caenorhabditis remanei]
gi|258503897|gb|ACV72685.1| UNC-4 [Caenorhabditis remanei]
Length = 223
Score = 41.6 bits (96), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 25/33 (75%), Gaps = 5/33 (15%)
Query: 1 MGELMALWL-----RVRVWFKNRRAKWRKRERN 28
M E +A+ L RV+VWF+NRRAKWRKRE+N
Sbjct: 108 MREALAMRLDLLESRVQVWFQNRRAKWRKREQN 140
>gi|110749931|ref|XP_001119966.1| PREDICTED: retinal homeobox protein Rx [Apis mellifera]
Length = 282
Score = 41.6 bits (96), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 41/92 (44%), Gaps = 16/92 (17%)
Query: 9 LRVRVWFKNRRAKWRKRER--------------NAMNAAAAAAVDFKNGFSTQFNGLMQT 54
+RV+VWF+NRRAKWR++E+ M A A+ GL+
Sbjct: 133 VRVQVWFQNRRAKWRRQEKMEAARLGLSEYHHPGNMRNVAGPALGLPGDPWLTPPGLLSA 192
Query: 55 FPDTDSLYTSAYSSYNNWASKVPSP--LGTIG 84
P + + Y SY ++PSP +G +G
Sbjct: 193 LPGFLAAPHTGYPSYLTSPRRLPSPPNVGAVG 224
>gi|47224480|emb|CAG08730.1| unnamed protein product [Tetraodon nigroviridis]
Length = 249
Score = 41.6 bits (96), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 16/18 (88%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRKRER
Sbjct: 98 RVQVWFQNRRAKWRKRER 115
>gi|363727605|ref|XP_425445.3| PREDICTED: ALX homeobox protein 1 [Gallus gallus]
Length = 328
Score = 41.6 bits (96), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 30/51 (58%), Gaps = 8/51 (15%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPDTDS 60
RV+VWF+NRRAKWRKRER A K+ F+ ++ + P TDS
Sbjct: 177 RVQVWFQNRRAKWRKRERYGQIQQA------KSHFAATYD--ISVLPRTDS 219
>gi|449272667|gb|EMC82474.1| ALX homeobox protein 1 [Columba livia]
Length = 326
Score = 41.6 bits (96), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 30/51 (58%), Gaps = 8/51 (15%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPDTDS 60
RV+VWF+NRRAKWRKRER A K+ F+ ++ + P TDS
Sbjct: 175 RVQVWFQNRRAKWRKRERYGQIQQA------KSHFAATYD--ISVLPRTDS 217
>gi|426386634|ref|XP_004059788.1| PREDICTED: retina and anterior neural fold homeobox protein 2
isoform 1 [Gorilla gorilla gorilla]
Length = 230
Score = 41.6 bits (96), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 25/40 (62%)
Query: 9 LRVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQF 48
+RV+VWF+NRRAKWR++ER + A AA + F
Sbjct: 115 VRVQVWFQNRRAKWRRQERLESGSGAVAAPRLPEAPALPF 154
>gi|281344761|gb|EFB20345.1| hypothetical protein PANDA_019137 [Ailuropoda melanoleuca]
Length = 422
Score = 41.6 bits (96), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 16/18 (88%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRKRER
Sbjct: 268 RVQVWFQNRRAKWRKRER 285
>gi|91083441|ref|XP_969909.1| PREDICTED: similar to conserved hypothetical protein [Tribolium
castaneum]
gi|270008142|gb|EFA04590.1| reversed polarity [Tribolium castaneum]
Length = 366
Score = 41.6 bits (96), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 38/68 (55%), Gaps = 7/68 (10%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E +AL L RV+VWF+NRRAKWRKRE ++ + ST FN + F
Sbjct: 158 EELALKLSLSESRVQVWFQNRRAKWRKREPPRKTGYISSNTP-SSTISTNFNTTI-PFTQ 215
Query: 58 TDSLYTSA 65
T++L +SA
Sbjct: 216 TNTLNSSA 223
>gi|59799514|gb|AAX07282.1| orthodenticle homolog Otxb [Oikopleura dioica]
Length = 359
Score = 41.6 bits (96), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 38/63 (60%), Gaps = 5/63 (7%)
Query: 1 MGELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTF 55
M E MAL + RV+VWFKNRRAK+R+++++ N +++ +V + T+ + +
Sbjct: 114 MREEMALKIGLPESRVQVWFKNRRAKFRQQQKSPKNNSSSQSVGKETEKETEKSDVDSEK 173
Query: 56 PDT 58
P T
Sbjct: 174 PST 176
>gi|28571323|ref|NP_608318.4| CG32532 [Drosophila melanogaster]
gi|22832579|gb|AAF48968.2| CG32532 [Drosophila melanogaster]
Length = 736
Score = 41.6 bits (96), Expect = 0.065, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 5/73 (6%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGL-----MQTFPDTDSLYTS 64
R++VWF+NRRAK+RK+E+ A A + + NG G Q +P +++
Sbjct: 553 RIQVWFQNRRAKYRKQEKQLQKALAPSVIPSCNGMMRNIQGYSVSRGYQPYPHHNTMNRY 612
Query: 65 AYSSYNNWASKVP 77
+ AS P
Sbjct: 613 PQDLFQMGASSYP 625
>gi|380023560|ref|XP_003695586.1| PREDICTED: retinal homeobox protein Rx-like [Apis florea]
Length = 282
Score = 41.6 bits (96), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 41/92 (44%), Gaps = 16/92 (17%)
Query: 9 LRVRVWFKNRRAKWRKRER--------------NAMNAAAAAAVDFKNGFSTQFNGLMQT 54
+RV+VWF+NRRAKWR++E+ M A A+ GL+
Sbjct: 133 VRVQVWFQNRRAKWRRQEKMEAARLGLSEYHHPGNMRNVAGPALGLPGDPWLTPPGLLSA 192
Query: 55 FPDTDSLYTSAYSSYNNWASKVPSP--LGTIG 84
P + + Y SY ++PSP +G +G
Sbjct: 193 LPGFLAAPHTGYPSYLTSPRRLPSPPNVGAVG 224
>gi|348555401|ref|XP_003463512.1| PREDICTED: paired mesoderm homeobox protein 2A-like [Cavia
porcellus]
Length = 285
Score = 41.6 bits (96), Expect = 0.065, Method: Composition-based stats.
Identities = 19/34 (55%), Positives = 23/34 (67%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNG 43
RV+VWF+NRRAK+RK+ER A AA K G
Sbjct: 133 RVQVWFQNRRAKFRKQERAASAKGAAGTTGAKKG 166
>gi|126339394|ref|XP_001364457.1| PREDICTED: ALX homeobox protein 1 [Monodelphis domestica]
Length = 326
Score = 41.6 bits (96), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 30/51 (58%), Gaps = 8/51 (15%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPDTDS 60
RV+VWF+NRRAKWRKRER A K+ F+ ++ + P TDS
Sbjct: 175 RVQVWFQNRRAKWRKRERYGQIQQA------KSHFAATYD--ISVLPRTDS 217
>gi|221307806|gb|ACM16761.1| RH73981p [Drosophila melanogaster]
Length = 358
Score = 41.6 bits (96), Expect = 0.066, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 5/73 (6%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGL-----MQTFPDTDSLYTS 64
R++VWF+NRRAK+RK+E+ A A + + NG G Q +P +++
Sbjct: 223 RIQVWFQNRRAKYRKQEKQLQKALAPSVIPSCNGMMRNIQGYSVSRGYQPYPHHNTMNRY 282
Query: 65 AYSSYNNWASKVP 77
+ AS P
Sbjct: 283 PQDLFQMGASSYP 295
>gi|124111346|gb|ABM92080.1| ALX4 [Pan troglodytes]
Length = 255
Score = 41.6 bits (96), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 16/18 (88%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRKRER
Sbjct: 101 RVQVWFQNRRAKWRKRER 118
>gi|345780690|ref|XP_539704.3| PREDICTED: ALX homeobox protein 1 [Canis lupus familiaris]
Length = 265
Score = 41.6 bits (96), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 30/51 (58%), Gaps = 8/51 (15%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPDTDS 60
RV+VWF+NRRAKWRKRER A K+ F+ ++ + P TDS
Sbjct: 114 RVQVWFQNRRAKWRKRERYGQIQQA------KSHFAATYD--ISVLPRTDS 156
>gi|348558708|ref|XP_003465158.1| PREDICTED: homeobox protein aristaless-like 4-like [Cavia
porcellus]
Length = 407
Score = 41.6 bits (96), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 16/18 (88%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRKRER
Sbjct: 253 RVQVWFQNRRAKWRKRER 270
>gi|332255913|ref|XP_003277070.1| PREDICTED: retina and anterior neural fold homeobox protein 2
isoform 1 [Nomascus leucogenys]
Length = 230
Score = 41.6 bits (96), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 25/40 (62%)
Query: 9 LRVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQF 48
+RV+VWF+NRRAKWR++ER + A AA + F
Sbjct: 115 VRVQVWFQNRRAKWRRQERLESGSGAVAAPRLPEAPALPF 154
>gi|332836398|ref|XP_521895.3| PREDICTED: LOW QUALITY PROTEIN: homeobox protein aristaless-like 4
[Pan troglodytes]
Length = 410
Score = 41.2 bits (95), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 16/18 (88%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRKRER
Sbjct: 256 RVQVWFQNRRAKWRKRER 273
>gi|312076583|ref|XP_003140926.1| hypothetical protein LOAG_05341 [Loa loa]
Length = 553
Score = 41.2 bits (95), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 15/20 (75%), Positives = 19/20 (95%)
Query: 10 RVRVWFKNRRAKWRKRERNA 29
RV+VWF+NRRAKWRK+ER +
Sbjct: 253 RVQVWFQNRRAKWRKQERTS 272
>gi|109122933|ref|XP_001100945.1| PREDICTED: retina and anterior neural fold homeobox protein 2-like
isoform 1 [Macaca mulatta]
gi|355702984|gb|EHH29475.1| Retina and anterior neural fold homeobox-like protein 1 [Macaca
mulatta]
gi|355755326|gb|EHH59073.1| Retina and anterior neural fold homeobox-like protein 1 [Macaca
fascicularis]
Length = 184
Score = 41.2 bits (95), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 25/40 (62%)
Query: 9 LRVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQF 48
+RV+VWF+NRRAKWR++ER + A AA + F
Sbjct: 69 VRVQVWFQNRRAKWRRQERLESGSGAVAAPRLPEAPALPF 108
>gi|321464405|gb|EFX75413.1| hypothetical protein DAPPUDRAFT_323335 [Daphnia pulex]
Length = 237
Score = 41.2 bits (95), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 8/67 (11%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNG-------FSTQFNGLMQTFPDTDSLY 62
R++VWF+NRRAK+RK+E+ A A + + NG + T G Q +P ++
Sbjct: 97 RIQVWFQNRRAKYRKQEKQLQKALAPSVLPACNGAAMMRNIYPTASRGY-QPYPHPNTFQ 155
Query: 63 TSAYSSY 69
+ Y Y
Sbjct: 156 MNRYPQY 162
>gi|196007322|ref|XP_002113527.1| hypothetical protein TRIADDRAFT_57021 [Trichoplax adhaerens]
gi|190583931|gb|EDV24001.1| hypothetical protein TRIADDRAFT_57021 [Trichoplax adhaerens]
Length = 177
Score = 41.2 bits (95), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 16/25 (64%), Positives = 19/25 (76%)
Query: 13 VWFKNRRAKWRKRERNAMNAAAAAA 37
VWF+NRRAKWRKRER A N + +
Sbjct: 14 VWFQNRRAKWRKRERQATNISTISG 38
>gi|47230477|emb|CAF99670.1| unnamed protein product [Tetraodon nigroviridis]
Length = 263
Score = 41.2 bits (95), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 16/18 (88%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRKRER
Sbjct: 112 RVQVWFQNRRAKWRKRER 129
>gi|301787271|ref|XP_002929051.1| PREDICTED: homeobox protein aristaless-like 4-like [Ailuropoda
melanoleuca]
Length = 353
Score = 41.2 bits (95), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 16/18 (88%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRKRER
Sbjct: 199 RVQVWFQNRRAKWRKRER 216
>gi|344280090|ref|XP_003411818.1| PREDICTED: visual system homeobox 1-like [Loxodonta africana]
Length = 366
Score = 41.2 bits (95), Expect = 0.072, Method: Composition-based stats.
Identities = 15/18 (83%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRKRE+
Sbjct: 208 RVQVWFQNRRAKWRKREK 225
>gi|213624006|gb|AAI70518.1| Unknown (protein for MGC:197245) [Xenopus laevis]
gi|213625396|gb|AAI70520.1| Unknown (protein for MGC:197247) [Xenopus laevis]
Length = 335
Score = 41.2 bits (95), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 16/18 (88%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRKRER
Sbjct: 184 RVQVWFQNRRAKWRKRER 201
>gi|195585242|ref|XP_002082398.1| GD25243 [Drosophila simulans]
gi|194194407|gb|EDX07983.1| GD25243 [Drosophila simulans]
Length = 411
Score = 41.2 bits (95), Expect = 0.072, Method: Composition-based stats.
Identities = 15/18 (83%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRKRE+
Sbjct: 198 RVQVWFQNRRAKWRKREK 215
>gi|148222011|ref|NP_001079116.1| ALX homeobox protein 1 [Xenopus laevis]
gi|3023596|sp|Q91574.1|ALX1_XENLA RecName: Full=ALX homeobox protein 1; AltName: Full=Cartilage
homeoprotein 1; Short=CART-1; AltName: Full=XCART1
gi|557062|gb|AAA50368.1| cartilage homeoprotein 1 precursor [Xenopus laevis]
Length = 335
Score = 41.2 bits (95), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 16/18 (88%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRKRER
Sbjct: 184 RVQVWFQNRRAKWRKRER 201
>gi|301604045|ref|XP_002931669.1| PREDICTED: ALX homeobox protein 1-like [Xenopus (Silurana)
tropicalis]
Length = 326
Score = 41.2 bits (95), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 16/18 (88%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRKRER
Sbjct: 175 RVQVWFQNRRAKWRKRER 192
>gi|28573684|ref|NP_788420.1| homeobrain [Drosophila melanogaster]
gi|28380639|gb|AAF46642.3| homeobrain [Drosophila melanogaster]
gi|66571176|gb|AAY51553.1| IP01393p [Drosophila melanogaster]
gi|220943354|gb|ACL84220.1| hbn-PA [synthetic construct]
gi|220953324|gb|ACL89205.1| hbn-PA [synthetic construct]
Length = 409
Score = 41.2 bits (95), Expect = 0.073, Method: Composition-based stats.
Identities = 15/18 (83%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRKRE+
Sbjct: 196 RVQVWFQNRRAKWRKREK 213
>gi|6136895|dbj|BAA85852.1| Arx homeodomain protein [Mus musculus]
Length = 562
Score = 41.2 bits (95), Expect = 0.073, Method: Composition-based stats.
Identities = 15/18 (83%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRKRE+
Sbjct: 372 RVQVWFQNRRAKWRKREK 389
>gi|403263874|ref|XP_003924228.1| PREDICTED: homeobox protein ARX [Saimiri boliviensis boliviensis]
Length = 464
Score = 41.2 bits (95), Expect = 0.073, Method: Composition-based stats.
Identities = 15/18 (83%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRKRE+
Sbjct: 273 RVQVWFQNRRAKWRKREK 290
>gi|397497709|ref|XP_003819648.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein ARX [Pan paniscus]
Length = 633
Score = 41.2 bits (95), Expect = 0.073, Method: Composition-based stats.
Identities = 15/18 (83%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRKRE+
Sbjct: 439 RVQVWFQNRRAKWRKREK 456
>gi|195479766|ref|XP_002101020.1| GE17381 [Drosophila yakuba]
gi|194188544|gb|EDX02128.1| GE17381 [Drosophila yakuba]
Length = 354
Score = 41.2 bits (95), Expect = 0.073, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 5/73 (6%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGL-----MQTFPDTDSLYTS 64
R++VWF+NRRAK+RK+E+ A A + + NG G Q +P +++
Sbjct: 223 RIQVWFQNRRAKYRKQEKQLQKALAPSVIPSCNGMMRNIQGYSVSRGYQPYPHHNTMNRY 282
Query: 65 AYSSYNNWASKVP 77
+ AS P
Sbjct: 283 PQDLFQMGASSYP 295
>gi|395838112|ref|XP_003791968.1| PREDICTED: homeobox protein ARX [Otolemur garnettii]
Length = 570
Score = 41.2 bits (95), Expect = 0.074, Method: Composition-based stats.
Identities = 15/18 (83%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRKRE+
Sbjct: 379 RVQVWFQNRRAKWRKREK 396
>gi|395507743|ref|XP_003758180.1| PREDICTED: visual system homeobox 1 [Sarcophilus harrisii]
Length = 346
Score = 41.2 bits (95), Expect = 0.074, Method: Composition-based stats.
Identities = 14/18 (77%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
R++VWF+NRRAKWRKRE+
Sbjct: 214 RIQVWFQNRRAKWRKREK 231
>gi|340709854|ref|XP_003393515.1| PREDICTED: retinal homeobox protein Rx-like [Bombus terrestris]
gi|350406119|ref|XP_003487661.1| PREDICTED: retinal homeobox protein Rx-like [Bombus impatiens]
Length = 282
Score = 41.2 bits (95), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 45/94 (47%), Gaps = 20/94 (21%)
Query: 9 LRVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQ----------------FNGLM 52
+RV+VWF+NRRAKWR++E+ M AA ++ + + + GL+
Sbjct: 133 VRVQVWFQNRRAKWRRQEK--MEAARLGLSEYHHPANMRNVAGPALGLPGDPWLTPPGLL 190
Query: 53 QTFPDTDSLYTSAYSSYNNWASKVPSP--LGTIG 84
P + + Y SY ++PSP +G +G
Sbjct: 191 SALPGFLAAPHTGYPSYLTSPRRLPSPPNVGAVG 224
>gi|313234391|emb|CBY24590.1| unnamed protein product [Oikopleura dioica]
Length = 305
Score = 41.2 bits (95), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 42/91 (46%), Gaps = 26/91 (28%)
Query: 10 RVRVWFKNRRAKWRKRER------------NAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
R++VWF+NRRAK+RK +R N +N A F GF Q P
Sbjct: 171 RIQVWFQNRRAKFRKVQRQMMASNALQSQPNLLNRTPAGITPFSQGF--------QGLPC 222
Query: 58 TDSLYTSAYS-SYNNWASKVP-----SPLGT 82
LY++A S SY ++ VP SPL T
Sbjct: 223 PSGLYSAAGSYSYYPLSAGVPGAPEQSPLNT 253
>gi|9967884|emb|CAC06429.1| homeobrain protein [Drosophila melanogaster]
Length = 409
Score = 41.2 bits (95), Expect = 0.074, Method: Composition-based stats.
Identities = 15/18 (83%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRKRE+
Sbjct: 196 RVQVWFQNRRAKWRKREK 213
>gi|195118214|ref|XP_002003635.1| GI21809 [Drosophila mojavensis]
gi|193914210|gb|EDW13077.1| GI21809 [Drosophila mojavensis]
Length = 392
Score = 41.2 bits (95), Expect = 0.075, Method: Composition-based stats.
Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 15/82 (18%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFST-----QFNGLMQT----FPDTDS 60
RV+VWF+NRRAKWRK+E+ A ++ F Q + + + PDT
Sbjct: 48 RVQVWFQNRRAKWRKQEKMGGEYEKGAGLELDVAFDDSAVLGQLDSALASGGTLLPDTPP 107
Query: 61 LYTSAYSSYNNWASKVPSPLGT 82
S N+ +++ +P GT
Sbjct: 108 ------QSSNSLDNELKAPFGT 123
>gi|355558252|gb|EHH15032.1| hypothetical protein EGK_01064, partial [Macaca mulatta]
Length = 254
Score = 41.2 bits (95), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 16/18 (88%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRKRER
Sbjct: 107 RVQVWFQNRRAKWRKRER 124
>gi|291404049|ref|XP_002718385.1| PREDICTED: paired related homeobox protein-like 1-like [Oryctolagus
cuniculus]
Length = 269
Score = 41.2 bits (95), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 17/27 (62%), Positives = 20/27 (74%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAA 36
RV+VWF+NRRAKWRK ER A + A
Sbjct: 82 RVQVWFQNRRAKWRKTERGASDQEPGA 108
>gi|194892982|ref|XP_001977782.1| GG18050 [Drosophila erecta]
gi|190649431|gb|EDV46709.1| GG18050 [Drosophila erecta]
Length = 769
Score = 41.2 bits (95), Expect = 0.075, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 5/73 (6%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGL-----MQTFPDTDSLYTS 64
R++VWF+NRRAK+RK+E+ A A + + NG G Q +P +++
Sbjct: 578 RIQVWFQNRRAKYRKQEKQLQKALAPSVIPSCNGMMRNIQGYSVSRGYQPYPHHNTMNRY 637
Query: 65 AYSSYNNWASKVP 77
+ AS P
Sbjct: 638 PQDLFQMGASSYP 650
>gi|345802097|ref|XP_854590.2| PREDICTED: uncharacterized protein LOC611786 [Canis lupus
familiaris]
Length = 782
Score = 41.2 bits (95), Expect = 0.076, Method: Composition-based stats.
Identities = 16/18 (88%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRKRER
Sbjct: 635 RVQVWFQNRRAKWRKRER 652
>gi|34419191|dbj|BAC84954.1| homeobox protein Chx10-1 [Cynops pyrrhogaster]
Length = 341
Score = 41.2 bits (95), Expect = 0.076, Method: Composition-based stats.
Identities = 14/18 (77%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
R++VWF+NRRAKWRKRE+
Sbjct: 192 RIQVWFQNRRAKWRKREK 209
>gi|407025359|gb|AFS65546.1| Alx1 [Patiria miniata]
Length = 393
Score = 41.2 bits (95), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 16/18 (88%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRKRER
Sbjct: 151 RVQVWFQNRRAKWRKRER 168
>gi|317373355|sp|Q8BYH0.2|DRGX_MOUSE RecName: Full=Dorsal root ganglia homeobox protein; AltName:
Full=Dorsal root ganglion 11; AltName: Full=Homeobox
protein DRG11; AltName: Full=Paired-related homeobox
protein-like 1
gi|188036459|gb|ACD45984.1| paired related homeobox protein-like 1 [Mus musculus]
Length = 263
Score = 41.2 bits (95), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 17/27 (62%), Positives = 20/27 (74%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAA 36
RV+VWF+NRRAKWRK ER A + A
Sbjct: 76 RVQVWFQNRRAKWRKTERGASDQEPGA 102
>gi|24497589|ref|NP_620689.1| homeobox protein ARX [Homo sapiens]
gi|27923733|sp|Q96QS3.1|ARX_HUMAN RecName: Full=Homeobox protein ARX; AltName:
Full=Aristaless-related homeobox
gi|15315600|gb|AAK93901.1| aristaless-related homeobox protein ARX [Homo sapiens]
gi|119619437|gb|EAW99031.1| aristaless related homeobox, isoform CRA_a [Homo sapiens]
Length = 562
Score = 41.2 bits (95), Expect = 0.077, Method: Composition-based stats.
Identities = 15/18 (83%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRKRE+
Sbjct: 371 RVQVWFQNRRAKWRKREK 388
>gi|335305801|ref|XP_003360298.1| PREDICTED: homeobox protein ARX-like [Sus scrofa]
Length = 380
Score = 41.2 bits (95), Expect = 0.077, Method: Composition-based stats.
Identities = 15/18 (83%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRKRE+
Sbjct: 189 RVQVWFQNRRAKWRKREK 206
>gi|426395443|ref|XP_004063982.1| PREDICTED: homeobox protein ARX [Gorilla gorilla gorilla]
Length = 525
Score = 41.2 bits (95), Expect = 0.078, Method: Composition-based stats.
Identities = 15/18 (83%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRKRE+
Sbjct: 334 RVQVWFQNRRAKWRKREK 351
>gi|194753688|ref|XP_001959142.1| GF12736 [Drosophila ananassae]
gi|190620440|gb|EDV35964.1| GF12736 [Drosophila ananassae]
Length = 410
Score = 41.2 bits (95), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 15/18 (83%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRKRE+
Sbjct: 187 RVQVWFQNRRAKWRKREK 204
>gi|148230462|ref|NP_001090191.1| visual system homeobox 1 [Xenopus laevis]
gi|123905790|sp|Q0P031.1|VSX1_XENLA RecName: Full=Visual system homeobox 1; AltName: Full=Transcription
factor vsx1; AltName: Full=Xvsx1
gi|84104901|gb|ABC54559.1| visual system homeobox 1 protein [Xenopus laevis]
Length = 344
Score = 41.2 bits (95), Expect = 0.078, Method: Composition-based stats.
Identities = 14/18 (77%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
R++VWF+NRRAKWRKRE+
Sbjct: 193 RIQVWFQNRRAKWRKREK 210
>gi|73987445|ref|XP_854816.1| PREDICTED: retina and anterior neural fold homeobox protein 2
[Canis lupus familiaris]
Length = 184
Score = 41.2 bits (95), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 24/40 (60%)
Query: 9 LRVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQF 48
+RV+VWF+NRRAKWR++ER + AA S F
Sbjct: 69 VRVQVWFQNRRAKWRRQERLESGSGPVAAPRLPEAPSLPF 108
>gi|432947060|ref|XP_004083922.1| PREDICTED: visual system homeobox 2-like [Oryzias latipes]
Length = 371
Score = 41.2 bits (95), Expect = 0.080, Method: Composition-based stats.
Identities = 14/18 (77%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
R++VWF+NRRAKWRKRE+
Sbjct: 210 RIQVWFQNRRAKWRKREK 227
>gi|390470456|ref|XP_003734292.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein aristaless-like 4
[Callithrix jacchus]
Length = 415
Score = 41.2 bits (95), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 16/18 (88%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRKRER
Sbjct: 261 RVQVWFQNRRAKWRKRER 278
>gi|344257015|gb|EGW13119.1| Homeobox protein aristaless-like 4 [Cricetulus griseus]
Length = 237
Score = 41.2 bits (95), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 16/18 (88%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRKRER
Sbjct: 83 RVQVWFQNRRAKWRKRER 100
>gi|149034142|gb|EDL88912.1| paired related homeobox protein-like 1, isoform CRA_b [Rattus
norvegicus]
Length = 263
Score = 41.2 bits (95), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 17/27 (62%), Positives = 20/27 (74%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAA 36
RV+VWF+NRRAKWRK ER A + A
Sbjct: 76 RVQVWFQNRRAKWRKTERGASDQEPGA 102
>gi|426256164|ref|XP_004021711.1| PREDICTED: dorsal root ganglia homeobox protein [Ovis aries]
Length = 305
Score = 41.2 bits (95), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 17/27 (62%), Positives = 20/27 (74%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAA 36
RV+VWF+NRRAKWRK ER A + A
Sbjct: 76 RVQVWFQNRRAKWRKTERGASDQEPGA 102
>gi|390479624|ref|XP_003735754.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein ARX-like
[Callithrix jacchus]
Length = 407
Score = 41.2 bits (95), Expect = 0.082, Method: Composition-based stats.
Identities = 15/18 (83%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRKRE+
Sbjct: 216 RVQVWFQNRRAKWRKREK 233
>gi|335304550|ref|XP_003359967.1| PREDICTED: visual system homeobox 1-like [Sus scrofa]
Length = 364
Score = 41.2 bits (95), Expect = 0.082, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 6/56 (10%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPDTDSLYTSA 65
R++VWF+NRRAKWRKRE+ ++ A + P DS+ +SA
Sbjct: 207 RIQVWFQNRRAKWRKREKRWGGSSVMAEYGLYGAM------VRHCIPPPDSVLSSA 256
>gi|440910593|gb|ELR60376.1| Homeobox protein ARX [Bos grunniens mutus]
Length = 503
Score = 41.2 bits (95), Expect = 0.082, Method: Composition-based stats.
Identities = 15/18 (83%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRKRE+
Sbjct: 318 RVQVWFQNRRAKWRKREK 335
>gi|70571424|dbj|BAE06744.1| transcription factor protein [Ciona intestinalis]
Length = 228
Score = 41.2 bits (95), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 20/32 (62%), Positives = 23/32 (71%), Gaps = 5/32 (15%)
Query: 1 MGELMALWL-----RVRVWFKNRRAKWRKRER 27
M E +AL L RV+VWF+NRRAKWRKRE
Sbjct: 162 MREALALRLDLVESRVQVWFQNRRAKWRKREH 193
>gi|405961985|gb|EKC27709.1| Homeobox protein ARX [Crassostrea gigas]
Length = 442
Score = 41.2 bits (95), Expect = 0.082, Method: Composition-based stats.
Identities = 15/18 (83%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRKRE+
Sbjct: 153 RVQVWFQNRRAKWRKREK 170
>gi|402909744|ref|XP_003917569.1| PREDICTED: homeobox protein ARX [Papio anubis]
Length = 424
Score = 41.2 bits (95), Expect = 0.082, Method: Composition-based stats.
Identities = 15/18 (83%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRKRE+
Sbjct: 233 RVQVWFQNRRAKWRKREK 250
>gi|301508010|gb|ADK77973.1| aristaless-related homeobox protein [Macropus eugenii]
Length = 552
Score = 41.2 bits (95), Expect = 0.082, Method: Composition-based stats.
Identities = 15/18 (83%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRKRE+
Sbjct: 361 RVQVWFQNRRAKWRKREK 378
>gi|332258274|ref|XP_003278225.1| PREDICTED: dorsal root ganglia homeobox protein [Nomascus
leucogenys]
Length = 268
Score = 41.2 bits (95), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 17/27 (62%), Positives = 20/27 (74%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAA 36
RV+VWF+NRRAKWRK ER A + A
Sbjct: 81 RVQVWFQNRRAKWRKTERGASDQEPGA 107
>gi|328703501|ref|XP_003242223.1| PREDICTED: retinal homeobox protein Rx1-like [Acyrthosiphon pisum]
Length = 302
Score = 41.2 bits (95), Expect = 0.082, Method: Composition-based stats.
Identities = 15/19 (78%), Positives = 19/19 (100%)
Query: 10 RVRVWFKNRRAKWRKRERN 28
RV+VWF+NRRAKWRKRE++
Sbjct: 106 RVQVWFQNRRAKWRKREKS 124
>gi|301608175|ref|XP_002933659.1| PREDICTED: homeobox protein ARX-like [Xenopus (Silurana)
tropicalis]
Length = 536
Score = 41.2 bits (95), Expect = 0.082, Method: Composition-based stats.
Identities = 15/18 (83%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRKRE+
Sbjct: 344 RVQVWFQNRRAKWRKREK 361
>gi|302564109|ref|NP_001181527.1| dorsal root ganglia homeobox protein [Macaca mulatta]
gi|402880151|ref|XP_003903676.1| PREDICTED: dorsal root ganglia homeobox protein [Papio anubis]
gi|355782761|gb|EHH64682.1| hypothetical protein EGM_17968 [Macaca fascicularis]
Length = 268
Score = 41.2 bits (95), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 17/27 (62%), Positives = 20/27 (74%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAA 36
RV+VWF+NRRAKWRK ER A + A
Sbjct: 81 RVQVWFQNRRAKWRKTERGASDQEPGA 107
>gi|260826474|ref|XP_002608190.1| retinal homeobox protein-like protein [Branchiostoma floridae]
gi|229293541|gb|EEN64200.1| retinal homeobox protein-like protein [Branchiostoma floridae]
Length = 268
Score = 41.2 bits (95), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 25/34 (73%), Gaps = 3/34 (8%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNG 43
RV+VWF+NRRAKWRKRE++ + V+F +G
Sbjct: 155 RVQVWFQNRRAKWRKREKHLHD---MGDVEFPDG 185
>gi|109130220|ref|XP_001091313.1| PREDICTED: homeobox protein ARX [Macaca mulatta]
Length = 562
Score = 41.2 bits (95), Expect = 0.082, Method: Composition-based stats.
Identities = 15/18 (83%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRKRE+
Sbjct: 371 RVQVWFQNRRAKWRKREK 388
>gi|148229045|ref|NP_001086450.1| aristaless related homeobox [Xenopus laevis]
gi|46395020|gb|AAS91656.1| aristaless-related homeobox 2 [Xenopus laevis]
Length = 528
Score = 41.2 bits (95), Expect = 0.082, Method: Composition-based stats.
Identities = 15/18 (83%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRKRE+
Sbjct: 336 RVQVWFQNRRAKWRKREK 353
>gi|21955176|ref|NP_665710.1| dorsal root ganglia homeobox protein [Rattus norvegicus]
gi|6015028|sp|Q62798.1|DRGX_RAT RecName: Full=Dorsal root ganglia homeobox protein; AltName:
Full=Dorsal root ganglion 11; AltName: Full=Homeobox
protein DRG11; AltName: Full=Paired-related homeobox
protein-like 1
gi|1144015|gb|AAA87203.1| paired-like homeodomain transcription factor [Rattus norvegicus]
Length = 263
Score = 41.2 bits (95), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 17/27 (62%), Positives = 20/27 (74%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAA 36
RV+VWF+NRRAKWRK ER A + A
Sbjct: 76 RVQVWFQNRRAKWRKTERGASDQEPGA 102
>gi|355562412|gb|EHH19006.1| hypothetical protein EGK_19626 [Macaca mulatta]
Length = 268
Score = 41.2 bits (95), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 17/27 (62%), Positives = 20/27 (74%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAA 36
RV+VWF+NRRAKWRK ER A + A
Sbjct: 81 RVQVWFQNRRAKWRKTERGASDQEPGA 107
>gi|125490351|ref|NP_001074956.1| retina and anterior neural fold homeobox protein 2 [Pan
troglodytes]
gi|146325676|sp|A2T711.1|RAX2_PANTR RecName: Full=Retina and anterior neural fold homeobox protein 2;
AltName: Full=Retina and anterior neural fold
homeobox-like protein 1
gi|124111168|gb|ABM91966.1| MGC15631 [Pan troglodytes]
Length = 184
Score = 41.2 bits (95), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 25/40 (62%)
Query: 9 LRVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQF 48
+RV+VWF+NRRAKWR++ER + A AA + F
Sbjct: 69 VRVQVWFQNRRAKWRRQERLESGSGAVAAPRLPEAPALPF 108
>gi|432852270|ref|XP_004067164.1| PREDICTED: homeobox protein aristaless-like 4-like [Oryzias
latipes]
Length = 367
Score = 41.2 bits (95), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 40/78 (51%), Gaps = 10/78 (12%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPDT-DSLYTSAYSS 68
RV+VWF+NRRAKWRKRER + FST + + T P+ + ++ S
Sbjct: 220 RVQVWFQNRRAKWRKRER------FGQMQQVRTHFSTAYELPLLTRPENYAQIQNPSWLS 273
Query: 69 YNNWASKVPS---PLGTI 83
++ AS VP P TI
Sbjct: 274 GSSAASPVPGCVVPCDTI 291
>gi|14249388|ref|NP_116142.1| retina and anterior neural fold homeobox protein 2 [Homo sapiens]
gi|426386636|ref|XP_004059789.1| PREDICTED: retina and anterior neural fold homeobox protein 2
isoform 2 [Gorilla gorilla gorilla]
gi|74760880|sp|Q96IS3.1|RAX2_HUMAN RecName: Full=Retina and anterior neural fold homeobox protein 2;
AltName: Full=Q50-type retinal homeobox protein;
AltName: Full=Retina and anterior neural fold
homeobox-like protein 1
gi|13938311|gb|AAH07284.1| RAX2 protein [Homo sapiens]
gi|17511706|gb|AAH18709.1| Retina and anterior neural fold homeobox 2 [Homo sapiens]
gi|21619116|gb|AAH32512.1| Retina and anterior neural fold homeobox 2 [Homo sapiens]
gi|32395648|gb|AAP41547.1| Q50-type retinal homeobox [Homo sapiens]
Length = 184
Score = 41.2 bits (95), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 25/40 (62%)
Query: 9 LRVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQF 48
+RV+VWF+NRRAKWR++ER + A AA + F
Sbjct: 69 VRVQVWFQNRRAKWRRQERLESGSGAVAAPRLPEAPALPF 108
>gi|213623920|gb|AAI70401.1| Aristaless-related homeobox 2 [Xenopus laevis]
gi|213625348|gb|AAI70403.1| Aristaless-related homeobox 2 [Xenopus laevis]
Length = 528
Score = 41.2 bits (95), Expect = 0.084, Method: Composition-based stats.
Identities = 15/18 (83%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRKRE+
Sbjct: 336 RVQVWFQNRRAKWRKREK 353
>gi|146325675|sp|A1YG25.1|RAX2_PANPA RecName: Full=Retina and anterior neural fold homeobox protein 2;
AltName: Full=Retina and anterior neural fold
homeobox-like protein 1
gi|121483898|gb|ABM54250.1| MGC15631 [Pan paniscus]
Length = 184
Score = 41.2 bits (95), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 25/40 (62%)
Query: 9 LRVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQF 48
+RV+VWF+NRRAKWR++ER + A AA + F
Sbjct: 69 VRVQVWFQNRRAKWRRQERLESGSGAVAAPRLPEAPALPF 108
>gi|26024213|ref|NP_031518.2| homeobox protein ARX [Mus musculus]
gi|27923957|sp|O35085.3|ARX_MOUSE RecName: Full=Homeobox protein ARX; AltName:
Full=Aristaless-related homeobox
gi|22163970|dbj|BAA28284.2| Arx homeoprotein [Mus musculus]
gi|30354717|gb|AAH52033.1| Aristaless related homeobox [Mus musculus]
Length = 564
Score = 41.2 bits (95), Expect = 0.084, Method: Composition-based stats.
Identities = 15/18 (83%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRKRE+
Sbjct: 373 RVQVWFQNRRAKWRKREK 390
>gi|328700141|ref|XP_003241160.1| PREDICTED: hypothetical protein LOC100569292 [Acyrthosiphon pisum]
Length = 457
Score = 41.2 bits (95), Expect = 0.085, Method: Composition-based stats.
Identities = 15/17 (88%), Positives = 17/17 (100%)
Query: 10 RVRVWFKNRRAKWRKRE 26
RV+VWF+NRRAKWRKRE
Sbjct: 211 RVQVWFQNRRAKWRKRE 227
>gi|449784876|ref|NP_001263380.1| dorsal root ganglia homeobox protein [Homo sapiens]
gi|158513808|sp|A6NNA5.1|DRGX_HUMAN RecName: Full=Dorsal root ganglia homeobox protein; AltName:
Full=Paired-related homeobox protein-like 1
gi|119613506|gb|EAW93100.1| hCG32744 [Homo sapiens]
gi|261861218|dbj|BAI47131.1| dorsal root ganglia homeobox [synthetic construct]
Length = 263
Score = 41.2 bits (95), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 17/27 (62%), Positives = 20/27 (74%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAA 36
RV+VWF+NRRAKWRK ER A + A
Sbjct: 76 RVQVWFQNRRAKWRKTERGASDQEPGA 102
>gi|393909901|gb|EFO23144.2| hypothetical protein LOAG_05341 [Loa loa]
Length = 577
Score = 41.2 bits (95), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 15/20 (75%), Positives = 19/20 (95%)
Query: 10 RVRVWFKNRRAKWRKRERNA 29
RV+VWF+NRRAKWRK+ER +
Sbjct: 253 RVQVWFQNRRAKWRKQERTS 272
>gi|344251521|gb|EGW07625.1| Homeobox protein ARX [Cricetulus griseus]
Length = 279
Score = 41.2 bits (95), Expect = 0.086, Method: Composition-based stats.
Identities = 19/31 (61%), Positives = 24/31 (77%), Gaps = 5/31 (16%)
Query: 2 GELMALWL-----RVRVWFKNRRAKWRKRER 27
GE +A+ L RV+VWF+NRRAKWRKRE+
Sbjct: 75 GEELAMRLDLTEARVQVWFQNRRAKWRKREK 105
>gi|332226021|ref|XP_003262187.1| PREDICTED: homeobox protein ESX1 [Nomascus leucogenys]
Length = 412
Score = 41.2 bits (95), Expect = 0.086, Method: Composition-based stats.
Identities = 19/37 (51%), Positives = 26/37 (70%), Gaps = 2/37 (5%)
Query: 10 RVRVWFKNRRAKWRKRERNAM--NAAAAAAVDFKNGF 44
RV+VWF+NRRAKW++ +R M N AAAA ++ F
Sbjct: 194 RVQVWFQNRRAKWKRNQRVLMLRNIAAAALAHPEDTF 230
>gi|118343665|ref|NP_001071654.1| transcription factor protein [Ciona intestinalis]
gi|70568894|dbj|BAE06312.1| transcription factor protein [Ciona intestinalis]
Length = 429
Score = 41.2 bits (95), Expect = 0.087, Method: Composition-based stats.
Identities = 15/21 (71%), Positives = 19/21 (90%)
Query: 10 RVRVWFKNRRAKWRKRERNAM 30
RV+VWF+NRRAKWRKRE+ +
Sbjct: 263 RVQVWFQNRRAKWRKREKQGI 283
>gi|307192281|gb|EFN75568.1| Retinal homeobox protein Rx3 [Harpegnathos saltator]
Length = 282
Score = 41.2 bits (95), Expect = 0.087, Method: Composition-based stats.
Identities = 25/87 (28%), Positives = 41/87 (47%), Gaps = 18/87 (20%)
Query: 9 LRVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQF----------------NGLM 52
+RV+VWF+NRRAKWR++E+ M AA ++ + + + GL+
Sbjct: 133 VRVQVWFQNRRAKWRRQEK--MEAARLGLSEYHHAANMRNVAGPALGLPGDPWLAPPGLL 190
Query: 53 QTFPDTDSLYTSAYSSYNNWASKVPSP 79
P + + Y SY ++PSP
Sbjct: 191 SALPGFLAAPHTGYPSYLTSPRRLPSP 217
>gi|296220129|ref|XP_002756185.1| PREDICTED: dorsal root ganglia homeobox protein [Callithrix
jacchus]
Length = 282
Score = 41.2 bits (95), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 17/27 (62%), Positives = 20/27 (74%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAA 36
RV+VWF+NRRAKWRK ER A + A
Sbjct: 95 RVQVWFQNRRAKWRKTERGASDQEPGA 121
>gi|395858717|ref|XP_003801706.1| PREDICTED: dorsal root ganglia homeobox protein [Otolemur
garnettii]
Length = 263
Score = 41.2 bits (95), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 17/27 (62%), Positives = 20/27 (74%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAA 36
RV+VWF+NRRAKWRK ER A + A
Sbjct: 76 RVQVWFQNRRAKWRKTERGASDQEPGA 102
>gi|344274342|ref|XP_003408976.1| PREDICTED: LOW QUALITY PROTEIN: dorsal root ganglia homeobox
protein-like [Loxodonta africana]
Length = 268
Score = 41.2 bits (95), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 17/27 (62%), Positives = 21/27 (77%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAA 36
RV+VWF+NRRAKWRK ER A + + A
Sbjct: 81 RVQVWFQNRRAKWRKTERGASDQESGA 107
>gi|56694798|gb|AAW23061.1| Prop-a [Oikopleura dioica]
Length = 315
Score = 41.2 bits (95), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 38/81 (46%), Gaps = 21/81 (25%)
Query: 10 RVRVWFKNRRAKWRKRER------------NAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
R++VWF+NRRAK+RK +R N +N A F GF Q P
Sbjct: 150 RIQVWFQNRRAKFRKVQRQMMASNALQSQPNLLNRTPAGITPFSQGF--------QGLPC 201
Query: 58 TDSLYTSAYS-SYNNWASKVP 77
LY++A S SY ++ VP
Sbjct: 202 PSGLYSAAGSYSYYPLSAGVP 222
>gi|426364705|ref|XP_004049438.1| PREDICTED: dorsal root ganglia homeobox protein [Gorilla gorilla
gorilla]
Length = 268
Score = 41.2 bits (95), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 17/27 (62%), Positives = 20/27 (74%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAA 36
RV+VWF+NRRAKWRK ER A + A
Sbjct: 81 RVQVWFQNRRAKWRKTERGASDQEPGA 107
>gi|148238213|ref|NP_001079329.1| aristaless related homeobox [Xenopus laevis]
gi|23499459|gb|AAN05413.1| aristaless-related homeobox [Xenopus laevis]
gi|213623330|gb|AAI69601.1| Aristaless related homeobox [Xenopus laevis]
Length = 527
Score = 41.2 bits (95), Expect = 0.090, Method: Composition-based stats.
Identities = 15/18 (83%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRKRE+
Sbjct: 335 RVQVWFQNRRAKWRKREK 352
>gi|327259351|ref|XP_003214501.1| PREDICTED: visual system homeobox 2-like [Anolis carolinensis]
Length = 408
Score = 41.2 bits (95), Expect = 0.090, Method: Composition-based stats.
Identities = 14/18 (77%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
R++VWF+NRRAKWRKRE+
Sbjct: 236 RIQVWFQNRRAKWRKREK 253
>gi|291407255|ref|XP_002720021.1| PREDICTED: aristaless related homeobox [Oryctolagus cuniculus]
Length = 454
Score = 41.2 bits (95), Expect = 0.090, Method: Composition-based stats.
Identities = 15/18 (83%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRKRE+
Sbjct: 263 RVQVWFQNRRAKWRKREK 280
>gi|197281988|gb|ACH57173.1| Pitx [Trichoplax adhaerens]
Length = 60
Score = 41.2 bits (95), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 20/29 (68%), Positives = 23/29 (79%), Gaps = 5/29 (17%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRE 26
E +A+W+ RVRVWFKNRRAKWRKRE
Sbjct: 32 EEIAMWINLNESRVRVWFKNRRAKWRKRE 60
>gi|195029473|ref|XP_001987597.1| GH19875 [Drosophila grimshawi]
gi|193903597|gb|EDW02464.1| GH19875 [Drosophila grimshawi]
Length = 395
Score = 40.8 bits (94), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 15/18 (83%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRKRE+
Sbjct: 193 RVQVWFQNRRAKWRKREK 210
>gi|297686443|ref|XP_002820758.1| PREDICTED: dorsal root ganglia homeobox protein [Pongo abelii]
Length = 268
Score = 40.8 bits (94), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 17/27 (62%), Positives = 20/27 (74%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAA 36
RV+VWF+NRRAKWRK ER A + A
Sbjct: 81 RVQVWFQNRRAKWRKTERGASDQEPGA 107
>gi|196166491|gb|ACG70804.1| goosecoid [Convolutriloba longifissura]
Length = 422
Score = 40.8 bits (94), Expect = 0.091, Method: Composition-based stats.
Identities = 15/20 (75%), Positives = 19/20 (95%)
Query: 10 RVRVWFKNRRAKWRKRERNA 29
RV VWFKNRRAKWRK++++A
Sbjct: 335 RVEVWFKNRRAKWRKQKKDA 354
>gi|432868791|ref|XP_004071635.1| PREDICTED: homeobox protein unc-4 homolog [Oryzias latipes]
Length = 351
Score = 40.8 bits (94), Expect = 0.092, Method: Composition-based stats.
Identities = 19/31 (61%), Positives = 23/31 (74%), Gaps = 5/31 (16%)
Query: 1 MGELMALWL-----RVRVWFKNRRAKWRKRE 26
M E +AL L RV+VWF+NRRAKWRK+E
Sbjct: 129 MREALALRLDLIESRVQVWFQNRRAKWRKKE 159
>gi|327272822|ref|XP_003221183.1| PREDICTED: ALX homeobox protein 1-like [Anolis carolinensis]
Length = 331
Score = 40.8 bits (94), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 16/18 (88%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRKRER
Sbjct: 180 RVQVWFQNRRAKWRKRER 197
>gi|154146243|ref|NP_001093644.1| homeobox protein ARX [Rattus norvegicus]
gi|160016491|sp|A6YP92.1|ARX_RAT RecName: Full=Homeobox protein ARX; AltName:
Full=Aristaless-related homeobox
gi|149688998|gb|ABR27821.1| aristaless-related homeobox protein [Rattus norvegicus]
Length = 566
Score = 40.8 bits (94), Expect = 0.092, Method: Composition-based stats.
Identities = 15/18 (83%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRKRE+
Sbjct: 375 RVQVWFQNRRAKWRKREK 392
>gi|114635169|ref|XP_001138723.1| PREDICTED: dorsal root ganglia homeobox protein [Pan troglodytes]
Length = 268
Score = 40.8 bits (94), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 17/27 (62%), Positives = 20/27 (74%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAA 36
RV+VWF+NRRAKWRK ER A + A
Sbjct: 81 RVQVWFQNRRAKWRKTERGASDQEPGA 107
>gi|195401625|ref|XP_002059413.1| GJ18584 [Drosophila virilis]
gi|194142419|gb|EDW58825.1| GJ18584 [Drosophila virilis]
Length = 405
Score = 40.8 bits (94), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 15/18 (83%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRKRE+
Sbjct: 198 RVQVWFQNRRAKWRKREK 215
>gi|358337749|dbj|GAA56083.1| homeobox protein aristaless-like 4 [Clonorchis sinensis]
Length = 529
Score = 40.8 bits (94), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 16/18 (88%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRKRER
Sbjct: 175 RVQVWFQNRRAKWRKRER 192
>gi|321474068|gb|EFX85034.1| reversed polarity homeodomain-like protein [Daphnia pulex]
Length = 331
Score = 40.8 bits (94), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 19/29 (65%), Positives = 22/29 (75%), Gaps = 5/29 (17%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRE 26
E +AL L RV+VWF+NRRAKWRKRE
Sbjct: 133 EELALRLQLSESRVQVWFQNRRAKWRKRE 161
>gi|291230018|ref|XP_002734967.1| PREDICTED: uncoordinated-4c-like [Saccoglossus kowalevskii]
Length = 289
Score = 40.8 bits (94), Expect = 0.093, Method: Composition-based stats.
Identities = 21/41 (51%), Positives = 26/41 (63%), Gaps = 5/41 (12%)
Query: 1 MGELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAA 36
M E +A+ L RV+VWF+NRRAKWRKRE+ A A
Sbjct: 130 MREALAMRLDLMEARVQVWFQNRRAKWRKREKYNKQQKATA 170
>gi|195456007|ref|XP_002074962.1| GK22873 [Drosophila willistoni]
gi|194171047|gb|EDW85948.1| GK22873 [Drosophila willistoni]
Length = 395
Score = 40.8 bits (94), Expect = 0.093, Method: Composition-based stats.
Identities = 15/18 (83%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRKRE+
Sbjct: 184 RVQVWFQNRRAKWRKREK 201
>gi|118343808|ref|NP_001071728.1| transcription factor protein [Ciona intestinalis]
gi|70569799|dbj|BAE06479.1| transcription factor protein [Ciona intestinalis]
Length = 257
Score = 40.8 bits (94), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 21/30 (70%), Gaps = 2/30 (6%)
Query: 10 RVRVWFKNRRAKWR--KRERNAMNAAAAAA 37
RV VWFKNRRAKWR KRER M A ++
Sbjct: 169 RVEVWFKNRRAKWRKQKRERELMKAETGSS 198
>gi|441656477|ref|XP_004091120.1| PREDICTED: retina and anterior neural fold homeobox protein 2
[Nomascus leucogenys]
Length = 184
Score = 40.8 bits (94), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 25/40 (62%)
Query: 9 LRVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQF 48
+RV+VWF+NRRAKWR++ER + A AA + F
Sbjct: 69 VRVQVWFQNRRAKWRRQERLESGSGAVAAPRLPEAPALPF 108
>gi|357626860|gb|EHJ76772.1| hypothetical protein KGM_02204 [Danaus plexippus]
Length = 439
Score = 40.8 bits (94), Expect = 0.096, Method: Composition-based stats.
Identities = 15/17 (88%), Positives = 17/17 (100%)
Query: 10 RVRVWFKNRRAKWRKRE 26
RV+VWF+NRRAKWRKRE
Sbjct: 221 RVQVWFQNRRAKWRKRE 237
>gi|195119468|ref|XP_002004253.1| GI19825 [Drosophila mojavensis]
gi|193909321|gb|EDW08188.1| GI19825 [Drosophila mojavensis]
Length = 411
Score = 40.8 bits (94), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 15/18 (83%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRKRE+
Sbjct: 207 RVQVWFQNRRAKWRKREK 224
>gi|115678906|ref|XP_001199761.1| PREDICTED: uncharacterized protein LOC763703 [Strongylocentrotus
purpuratus]
Length = 477
Score = 40.8 bits (94), Expect = 0.097, Method: Composition-based stats.
Identities = 15/18 (83%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRKRE+
Sbjct: 227 RVQVWFQNRRAKWRKREK 244
>gi|397475296|ref|XP_003809079.1| PREDICTED: dorsal root ganglia homeobox protein [Pan paniscus]
Length = 265
Score = 40.8 bits (94), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 17/27 (62%), Positives = 20/27 (74%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAA 36
RV+VWF+NRRAKWRK ER A + A
Sbjct: 78 RVQVWFQNRRAKWRKTERGASDQEPGA 104
>gi|297703116|ref|XP_002828498.1| PREDICTED: retina and anterior neural fold homeobox protein 2
isoform 2 [Pongo abelii]
Length = 184
Score = 40.8 bits (94), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 25/40 (62%)
Query: 9 LRVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQF 48
+RV+VWF+NRRAKWR++ER + A AA + F
Sbjct: 69 VRVQVWFQNRRAKWRRQERLESGSGAVAAPRLPEAPALPF 108
>gi|224042664|ref|XP_002195184.1| PREDICTED: homeobox protein ARX [Taeniopygia guttata]
Length = 509
Score = 40.8 bits (94), Expect = 0.097, Method: Composition-based stats.
Identities = 15/18 (83%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRKRE+
Sbjct: 318 RVQVWFQNRRAKWRKREK 335
>gi|297709609|ref|XP_002831520.1| PREDICTED: homeobox protein ARX [Pongo abelii]
gi|149042310|gb|EDL96017.1| similar to Arx homeoprotein (predicted), isoform CRA_a [Rattus
norvegicus]
Length = 200
Score = 40.8 bits (94), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 15/18 (83%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRKRE+
Sbjct: 9 RVQVWFQNRRAKWRKREK 26
>gi|149034141|gb|EDL88911.1| paired related homeobox protein-like 1, isoform CRA_a [Rattus
norvegicus]
Length = 253
Score = 40.8 bits (94), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 17/27 (62%), Positives = 20/27 (74%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAA 36
RV+VWF+NRRAKWRK ER A + A
Sbjct: 76 RVQVWFQNRRAKWRKTERGASDQEPGA 102
>gi|47228761|emb|CAG07493.1| unnamed protein product [Tetraodon nigroviridis]
Length = 225
Score = 40.8 bits (94), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 16/18 (88%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRKRER
Sbjct: 56 RVQVWFQNRRAKWRKRER 73
>gi|344274010|ref|XP_003408811.1| PREDICTED: visual system homeobox 2-like [Loxodonta africana]
Length = 360
Score = 40.8 bits (94), Expect = 0.099, Method: Composition-based stats.
Identities = 14/18 (77%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
R++VWF+NRRAKWRKRE+
Sbjct: 191 RIQVWFQNRRAKWRKREK 208
>gi|297491619|ref|XP_002699015.1| PREDICTED: dorsal root ganglia homeobox protein [Bos taurus]
gi|296472028|tpg|DAA14143.1| TPA: paired related homeobox protein-like 1-like [Bos taurus]
Length = 263
Score = 40.8 bits (94), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 17/27 (62%), Positives = 20/27 (74%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAA 36
RV+VWF+NRRAKWRK ER A + A
Sbjct: 76 RVQVWFQNRRAKWRKTERGASDQEPGA 102
>gi|410975579|ref|XP_003994208.1| PREDICTED: dorsal root ganglia homeobox protein [Felis catus]
Length = 263
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 17/27 (62%), Positives = 20/27 (74%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAA 36
RV+VWF+NRRAKWRK ER A + A
Sbjct: 76 RVQVWFQNRRAKWRKTERGASDQEPGA 102
>gi|348538997|ref|XP_003456976.1| PREDICTED: homeobox protein unc-4 homolog [Oreochromis niloticus]
Length = 532
Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 19/31 (61%), Positives = 23/31 (74%), Gaps = 5/31 (16%)
Query: 1 MGELMALWL-----RVRVWFKNRRAKWRKRE 26
M E +AL L RV+VWF+NRRAKWRK+E
Sbjct: 130 MREALALRLDLVESRVQVWFQNRRAKWRKKE 160
>gi|403276711|ref|XP_003930032.1| PREDICTED: dorsal root ganglia homeobox protein [Saimiri
boliviensis boliviensis]
Length = 268
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 17/27 (62%), Positives = 20/27 (74%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAA 36
RV+VWF+NRRAKWRK ER A + A
Sbjct: 81 RVQVWFQNRRAKWRKTERGASDQEPGA 107
>gi|354475607|ref|XP_003500019.1| PREDICTED: visual system homeobox 1-like [Cricetulus griseus]
Length = 318
Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 29/59 (49%), Gaps = 6/59 (10%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPDTDSLYTSAYSS 68
R++VWF+NRRAKWRKRE+ ++ A + P DSL SA S
Sbjct: 159 RIQVWFQNRRAKWRKREKRWGGSSVMAEYGLYGAM------VRHCIPLPDSLLNSAADS 211
>gi|221119371|ref|XP_002160816.1| PREDICTED: homeobox protein aristaless-like isoform 1 [Hydra
magnipapillata]
Length = 239
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 16/23 (69%), Positives = 20/23 (86%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNA 32
RV+VWF+NRRAKWRKRE+ + N
Sbjct: 93 RVQVWFQNRRAKWRKREKLSYNV 115
>gi|354465789|ref|XP_003495359.1| PREDICTED: dorsal root ganglia homeobox protein-like [Cricetulus
griseus]
Length = 263
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 17/27 (62%), Positives = 20/27 (74%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAA 36
RV+VWF+NRRAKWRK ER A + A
Sbjct: 76 RVQVWFQNRRAKWRKTERGASDQEPGA 102
>gi|301615770|ref|XP_002937332.1| PREDICTED: homeobox protein aristaless-like 4-like [Xenopus
(Silurana) tropicalis]
Length = 360
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 16/18 (88%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRKRER
Sbjct: 229 RVQVWFQNRRAKWRKRER 246
>gi|167900486|ref|NP_001108138.1| aristaless related homeobox [Canis lupus familiaris]
Length = 574
Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 15/18 (83%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRKRE+
Sbjct: 383 RVQVWFQNRRAKWRKREK 400
>gi|301783499|ref|XP_002927160.1| PREDICTED: dorsal root ganglia homeobox protein-like [Ailuropoda
melanoleuca]
Length = 263
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 17/27 (62%), Positives = 20/27 (74%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAA 36
RV+VWF+NRRAKWRK ER A + A
Sbjct: 76 RVQVWFQNRRAKWRKTERGASDQEPGA 102
>gi|118794479|ref|XP_321511.3| AGAP001593-PA [Anopheles gambiae str. PEST]
gi|116116316|gb|EAA01371.4| AGAP001593-PA [Anopheles gambiae str. PEST]
Length = 319
Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 15/18 (83%), Positives = 17/18 (94%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV VWFKNRRAKWRK++R
Sbjct: 230 RVEVWFKNRRAKWRKQKR 247
>gi|19577382|emb|CAD27764.1| putative transcription factor [Anopheles gambiae]
Length = 319
Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 15/18 (83%), Positives = 17/18 (94%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV VWFKNRRAKWRK++R
Sbjct: 230 RVEVWFKNRRAKWRKQKR 247
>gi|410901020|ref|XP_003963994.1| PREDICTED: visual system homeobox 1-like [Takifugu rubripes]
Length = 366
Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 14/18 (77%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
R++VWF+NRRAKWRKRE+
Sbjct: 200 RIQVWFQNRRAKWRKREK 217
>gi|374277734|gb|AEZ03833.1| homeobrain [Terebratalia transversa]
Length = 323
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 15/18 (83%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRKRE+
Sbjct: 182 RVQVWFQNRRAKWRKREK 199
>gi|149035039|gb|EDL89759.1| Unc4.1 homeobox (C. elegans) [Rattus norvegicus]
Length = 530
Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 19/31 (61%), Positives = 23/31 (74%), Gaps = 5/31 (16%)
Query: 1 MGELMALWL-----RVRVWFKNRRAKWRKRE 26
M E +AL L RV+VWF+NRRAKWRK+E
Sbjct: 138 MREALALRLDLVESRVQVWFQNRRAKWRKKE 168
>gi|351706647|gb|EHB09566.1| Visual system homeobox 1 [Heterocephalus glaber]
Length = 299
Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 14/18 (77%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
R++VWF+NRRAKWRKRE+
Sbjct: 150 RIQVWFQNRRAKWRKREK 167
>gi|2190464|emb|CAB09537.1| Uncx4.1 [Mus musculus]
Length = 387
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 19/31 (61%), Positives = 23/31 (74%), Gaps = 5/31 (16%)
Query: 1 MGELMALWL-----RVRVWFKNRRAKWRKRE 26
M E +AL L RV+VWF+NRRAKWRK+E
Sbjct: 138 MREALALRLDLVESRVQVWFQNRRAKWRKKE 168
>gi|340730423|gb|AEK64852.1| aristaless-like homeobox 1 protein [Xenopus (Silurana)
tropicalis]
Length = 167
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 16/18 (88%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRKRER
Sbjct: 22 RVQVWFQNRRAKWRKRER 39
>gi|260801387|ref|XP_002595577.1| paired-like homeodomain protein unc-4 [Branchiostoma floridae]
gi|229280824|gb|EEN51589.1| paired-like homeodomain protein unc-4 [Branchiostoma floridae]
Length = 499
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 23/31 (74%), Gaps = 5/31 (16%)
Query: 1 MGELMALWL-----RVRVWFKNRRAKWRKRE 26
M E +AL L RV+VWF+NRRAKWRK+E
Sbjct: 144 MREALALRLDLVESRVQVWFQNRRAKWRKKE 174
>gi|148687196|gb|EDL19143.1| Unc4.1 homeobox (C. elegans) [Mus musculus]
Length = 529
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 19/31 (61%), Positives = 23/31 (74%), Gaps = 5/31 (16%)
Query: 1 MGELMALWL-----RVRVWFKNRRAKWRKRE 26
M E +AL L RV+VWF+NRRAKWRK+E
Sbjct: 138 MREALALRLDLVESRVQVWFQNRRAKWRKKE 168
>gi|3021450|emb|CAA75668.1| prdl-a [Hydra vulgaris]
Length = 229
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 16/23 (69%), Positives = 20/23 (86%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNA 32
RV+VWF+NRRAKWRKRE+ + N
Sbjct: 83 RVQVWFQNRRAKWRKREKLSYNV 105
>gi|7305613|ref|NP_038730.1| homeobox protein unc-4 homolog [Mus musculus]
gi|81882119|sp|O08934.2|UNC4_MOUSE RecName: Full=Homeobox protein unc-4 homolog; AltName:
Full=Homeobox protein Uncx4.1
gi|2597990|emb|CAA04542.1| transcriptional control factor [Mus musculus]
gi|7963719|gb|AAF71322.1| UNC4 protein [Mus musculus]
gi|30704666|gb|AAH51973.1| Uncx protein [Mus musculus]
Length = 530
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 19/31 (61%), Positives = 23/31 (74%), Gaps = 5/31 (16%)
Query: 1 MGELMALWL-----RVRVWFKNRRAKWRKRE 26
M E +AL L RV+VWF+NRRAKWRK+E
Sbjct: 138 MREALALRLDLVESRVQVWFQNRRAKWRKKE 168
>gi|291231892|ref|XP_002735897.1| PREDICTED: aristaless homeodomain transcription factor-like
[Saccoglossus kowalevskii]
Length = 236
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 16/18 (88%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRKRER
Sbjct: 148 RVQVWFQNRRAKWRKRER 165
>gi|301618474|ref|XP_002938642.1| PREDICTED: visual system homeobox 2-like [Xenopus (Silurana)
tropicalis]
Length = 348
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 14/18 (77%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
R++VWF+NRRAKWRKRE+
Sbjct: 160 RIQVWFQNRRAKWRKREK 177
>gi|157122925|ref|XP_001659959.1| paired box protein, putative [Aedes aegypti]
gi|108882959|gb|EAT47184.1| AAEL001696-PA [Aedes aegypti]
Length = 289
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 19/34 (55%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNG 43
RV+VWF+NRRAKWRKRE+ AM +A + G
Sbjct: 139 RVQVWFQNRRAKWRKREK-AMGRDTSAFLHHDQG 171
>gi|47224300|emb|CAG09146.1| unnamed protein product [Tetraodon nigroviridis]
Length = 312
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 14/18 (77%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
R++VWF+NRRAKWRKRE+
Sbjct: 172 RIQVWFQNRRAKWRKREK 189
>gi|334312715|ref|XP_003339770.1| PREDICTED: visual system homeobox 1-like [Monodelphis domestica]
Length = 348
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 14/18 (77%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
R++VWF+NRRAKWRKRE+
Sbjct: 215 RIQVWFQNRRAKWRKREK 232
>gi|354486037|ref|XP_003505188.1| PREDICTED: visual system homeobox 2-like [Cricetulus griseus]
gi|344245551|gb|EGW01655.1| Visual system homeobox 2 [Cricetulus griseus]
Length = 361
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 14/18 (77%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
R++VWF+NRRAKWRKRE+
Sbjct: 191 RIQVWFQNRRAKWRKREK 208
>gi|363739532|ref|XP_414766.3| PREDICTED: LOW QUALITY PROTEIN: homeobox protein unc-4 homolog
[Gallus gallus]
Length = 445
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 19/31 (61%), Positives = 23/31 (74%), Gaps = 5/31 (16%)
Query: 1 MGELMALWL-----RVRVWFKNRRAKWRKRE 26
M E +AL L RV+VWF+NRRAKWRK+E
Sbjct: 126 MREALALRLDLVESRVQVWFQNRRAKWRKKE 156
>gi|345792953|ref|XP_848719.2| PREDICTED: dorsal root ganglia homeobox protein [Canis lupus
familiaris]
Length = 287
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/27 (62%), Positives = 20/27 (74%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAA 36
RV+VWF+NRRAKWRK ER A + A
Sbjct: 100 RVQVWFQNRRAKWRKTERGASDQEPGA 126
>gi|327259725|ref|XP_003214686.1| PREDICTED: homeobox protein aristaless-like 4-like [Anolis
carolinensis]
Length = 337
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 16/18 (88%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRKRER
Sbjct: 185 RVQVWFQNRRAKWRKRER 202
>gi|281346213|gb|EFB21797.1| hypothetical protein PANDA_016919 [Ailuropoda melanoleuca]
Length = 252
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/27 (62%), Positives = 20/27 (74%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAA 36
RV+VWF+NRRAKWRK ER A + A
Sbjct: 65 RVQVWFQNRRAKWRKTERGASDQEPGA 91
>gi|440902039|gb|ELR52885.1| Dorsal root ganglia homeobox protein, partial [Bos grunniens
mutus]
Length = 257
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 17/27 (62%), Positives = 20/27 (74%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAA 36
RV+VWF+NRRAKWRK ER A + A
Sbjct: 70 RVQVWFQNRRAKWRKTERGASDQEPGA 96
>gi|148692895|gb|EDL24842.1| paired related homeobox protein-like 1 [Mus musculus]
Length = 295
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 17/27 (62%), Positives = 20/27 (74%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAA 36
RV+VWF+NRRAKWRK ER A + A
Sbjct: 118 RVQVWFQNRRAKWRKTERGASDQEPGA 144
>gi|426241769|ref|XP_004014761.1| PREDICTED: visual system homeobox 1 [Ovis aries]
Length = 310
Score = 40.8 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 14/18 (77%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
R++VWF+NRRAKWRKRE+
Sbjct: 152 RIQVWFQNRRAKWRKREK 169
>gi|397518462|ref|XP_003829405.1| PREDICTED: visual system homeobox 1 isoform 2 [Pan paniscus]
gi|410054951|ref|XP_003953742.1| PREDICTED: visual system homeobox 1 [Pan troglodytes]
Length = 280
Score = 40.8 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 14/18 (77%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
R++VWF+NRRAKWRKRE+
Sbjct: 207 RIQVWFQNRRAKWRKREK 224
>gi|395827532|ref|XP_003786954.1| PREDICTED: visual system homeobox 2 [Otolemur garnettii]
Length = 360
Score = 40.8 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 14/18 (77%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
R++VWF+NRRAKWRKRE+
Sbjct: 191 RIQVWFQNRRAKWRKREK 208
>gi|316936360|gb|ADU60209.1| vsx2 [Carassius auratus]
Length = 371
Score = 40.8 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 14/18 (77%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
R++VWF+NRRAKWRKRE+
Sbjct: 208 RIQVWFQNRRAKWRKREK 225
>gi|161789023|sp|O42477.3|VSX2_DANRE RecName: Full=Visual system homeobox 2; AltName: Full=Ceh-10
homeodomain-containing homolog; AltName: Full=Homeobox
protein ALX; AltName: Full=Homeobox protein CHX10;
AltName: Full=Transcription factor VSX2
Length = 393
Score = 40.8 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 14/18 (77%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
R++VWF+NRRAKWRKRE+
Sbjct: 208 RIQVWFQNRRAKWRKREK 225
>gi|154147573|ref|NP_001093670.1| visual system homeobox 1 [Xenopus (Silurana) tropicalis]
gi|134254267|gb|AAI35614.1| vsx1 protein [Xenopus (Silurana) tropicalis]
Length = 344
Score = 40.8 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 14/18 (77%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
R++VWF+NRRAKWRKRE+
Sbjct: 193 RIQVWFQNRRAKWRKREK 210
>gi|84380301|gb|ABC58683.1| EBX transcription factor [Capitella teleta]
Length = 355
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 23/30 (76%), Gaps = 5/30 (16%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRER 27
E +AL L RV+VWF+NRRAKWRKRE+
Sbjct: 159 EELALRLDHSEARVQVWFQNRRAKWRKREK 188
>gi|45382113|ref|NP_990099.1| visual system homeobox 2 [Gallus gallus]
gi|25008342|sp|Q9IAL1.1|VSX2_CHICK RecName: Full=Visual system homeobox 2; AltName: Full=Ceh-10
homeodomain-containing homolog; AltName: Full=Homeobox
protein CHX10
gi|7211448|gb|AAF40313.1|AF178671_1 homeobox protein Chx10 [Gallus gallus]
Length = 377
Score = 40.8 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 14/18 (77%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
R++VWF+NRRAKWRKRE+
Sbjct: 210 RIQVWFQNRRAKWRKREK 227
>gi|157278469|ref|NP_001098336.1| visual system homeobox 2 [Oryzias latipes]
gi|25009574|sp|Q9I9A3.1|VSX2_ORYLA RecName: Full=Visual system homeobox 2; AltName: Full=Ceh-10
homeodomain-containing homolog; AltName: Full=Homeobox
protein CHX10; AltName: Full=Transcription factor VSX2
gi|7635915|emb|CAB88702.1| Vsx2 transcription factor [Oryzias latipes]
Length = 393
Score = 40.8 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 14/18 (77%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
R++VWF+NRRAKWRKRE+
Sbjct: 205 RIQVWFQNRRAKWRKREK 222
>gi|410954493|ref|XP_003983899.1| PREDICTED: visual system homeobox 1 [Felis catus]
Length = 364
Score = 40.8 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 14/18 (77%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
R++VWF+NRRAKWRKRE+
Sbjct: 207 RIQVWFQNRRAKWRKREK 224
>gi|443692131|gb|ELT93804.1| hypothetical protein CAPTEDRAFT_169576 [Capitella teleta]
Length = 355
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 23/30 (76%), Gaps = 5/30 (16%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRER 27
E +AL L RV+VWF+NRRAKWRKRE+
Sbjct: 159 EELALRLDLSEARVQVWFQNRRAKWRKREK 188
>gi|70778522|gb|AAZ08039.1| hbox10 [Xenopus (Silurana) tropicalis]
Length = 569
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 8/79 (10%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNA-----AAAAAVDFKNGFSTQFNGLMQTFPDTDSLYTS 64
R+ VWF+NRRAKWRK E+ ++ +AA + T + + + P+ SL S
Sbjct: 219 RIMVWFQNRRAKWRKVEKTSIKGPRKPLSAAGMSRPETAVLTVSSSVALSRPEAVSL--S 276
Query: 65 AYSSYNNWASKVPSPLGTI 83
S ++ + S P P+G +
Sbjct: 277 VTSGFHTYGSAFP-PVGGV 294
>gi|2329924|gb|AAB66714.1| ALX [Danio rerio]
Length = 374
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 14/18 (77%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
R++VWF+NRRAKWRKRE+
Sbjct: 210 RIQVWFQNRRAKWRKREK 227
>gi|351712521|gb|EHB15440.1| Visual system homeobox 2 [Heterocephalus glaber]
Length = 356
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 14/18 (77%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
R++VWF+NRRAKWRKRE+
Sbjct: 186 RIQVWFQNRRAKWRKREK 203
>gi|327262713|ref|XP_003216168.1| PREDICTED: visual system homeobox 1-like [Anolis carolinensis]
Length = 371
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 14/18 (77%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
R++VWF+NRRAKWRKRE+
Sbjct: 219 RIQVWFQNRRAKWRKREK 236
>gi|161333811|ref|NP_571537.2| visual system homeobox 2 [Danio rerio]
Length = 372
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 14/18 (77%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
R++VWF+NRRAKWRKRE+
Sbjct: 208 RIQVWFQNRRAKWRKREK 225
>gi|114653932|ref|XP_001156350.1| PREDICTED: visual system homeobox 2 [Pan troglodytes]
Length = 361
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 14/18 (77%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
R++VWF+NRRAKWRKRE+
Sbjct: 191 RIQVWFQNRRAKWRKREK 208
>gi|2209139|gb|AAC24601.1| paired-like homeobox protein [Carassius auratus]
Length = 305
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 14/18 (77%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
R++VWF+NRRAKWRKRE+
Sbjct: 142 RIQVWFQNRRAKWRKREK 159
>gi|47222353|emb|CAG05102.1| unnamed protein product [Tetraodon nigroviridis]
Length = 324
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 14/18 (77%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
R++VWF+NRRAKWRKRE+
Sbjct: 200 RIQVWFQNRRAKWRKREK 217
>gi|219518636|gb|AAI71926.1| Prrxl1 protein [Mus musculus]
Length = 180
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 17/27 (62%), Positives = 20/27 (74%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAA 36
RV+VWF+NRRAKWRK ER A + A
Sbjct: 76 RVQVWFQNRRAKWRKTERGASDQEPGA 102
>gi|260791956|ref|XP_002590993.1| Q50 paired-like homeodomain transcription factor [Branchiostoma
floridae]
gi|229276193|gb|EEN47004.1| Q50 paired-like homeodomain transcription factor [Branchiostoma
floridae]
Length = 320
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/32 (59%), Positives = 23/32 (71%), Gaps = 5/32 (15%)
Query: 1 MGELMAL-----WLRVRVWFKNRRAKWRKRER 27
M E +AL RV+VWF+NRRAKWRK+ER
Sbjct: 148 MREQLALRADLTEARVQVWFQNRRAKWRKKER 179
>gi|426257993|ref|XP_004022605.1| PREDICTED: homeobox protein ARX [Ovis aries]
Length = 462
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 15/18 (83%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRKRE+
Sbjct: 304 RVQVWFQNRRAKWRKREK 321
>gi|327281440|ref|XP_003225456.1| PREDICTED: dorsal root ganglia homeobox protein-like [Anolis
carolinensis]
Length = 261
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 20/29 (68%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAV 38
RV+VWF+NRRAKWRK ER A + V
Sbjct: 76 RVQVWFQNRRAKWRKTERGASEQEGSKEV 104
>gi|258504811|gb|ACV73011.1| ALR-1 [Caenorhabditis remanei]
Length = 316
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 25/34 (73%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNG 43
RV+VWF+NRRAK+RK+ER++ + A ++ N
Sbjct: 151 RVQVWFQNRRAKYRKQERSSTHHPYQAPLNIPNS 184
>gi|443693092|gb|ELT94535.1| hypothetical protein CAPTEDRAFT_225092 [Capitella teleta]
Length = 292
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 16/24 (66%), Positives = 19/24 (79%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAA 33
RV VWFKNRRAKWRK++R A+
Sbjct: 182 RVEVWFKNRRAKWRKQKREEEAAS 205
>gi|49169835|ref|NP_001001796.1| dorsal root ganglia homeobox protein [Mus musculus]
gi|26333375|dbj|BAC30405.1| unnamed protein product [Mus musculus]
gi|124376814|gb|AAI32614.1| Paired related homeobox protein-like 1 [Mus musculus]
gi|148877678|gb|AAI45918.1| Paired related homeobox protein-like 1 [Mus musculus]
gi|188036461|gb|ACD45985.1| paired related homeobox protein-like 1b [Mus musculus]
Length = 220
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 17/27 (62%), Positives = 20/27 (74%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAA 36
RV+VWF+NRRAKWRK ER A + A
Sbjct: 76 RVQVWFQNRRAKWRKTERGASDQEPGA 102
>gi|361129610|pdb|2L7M|P Chain P, Solution Structure Of The Pitx2 Homeodomain R24h Mutant
Length = 68
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/29 (68%), Positives = 22/29 (75%), Gaps = 5/29 (17%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRE 26
E +A+W RVRVWFKNRRAKWRKRE
Sbjct: 34 EEIAVWTNLTEARVRVWFKNRRAKWRKRE 62
>gi|284005045|ref|NP_001164685.1| aristaless homeodomain transcription factor [Saccoglossus
kowalevskii]
gi|283462198|gb|ADB22393.1| aristaless homeodomain transcription factor [Saccoglossus
kowalevskii]
Length = 256
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 16/18 (88%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRKRER
Sbjct: 148 RVQVWFQNRRAKWRKRER 165
>gi|18202522|sp|Q26657.2|ALX_STRPU RecName: Full=Aristaless homeobox protein; Short=ALX; AltName:
Full=SpPrx-1
gi|2055317|dbj|BAA19774.1| homeobox [Strongylocentrotus purpuratus]
Length = 327
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 15/18 (83%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRKRE+
Sbjct: 255 RVQVWFQNRRAKWRKREK 272
>gi|258504795|gb|ACV73003.1| ALR-1 [Caenorhabditis remanei]
gi|258504797|gb|ACV73004.1| ALR-1 [Caenorhabditis remanei]
gi|258504799|gb|ACV73005.1| ALR-1 [Caenorhabditis remanei]
gi|258504801|gb|ACV73006.1| ALR-1 [Caenorhabditis remanei]
gi|258504803|gb|ACV73007.1| ALR-1 [Caenorhabditis remanei]
gi|258504805|gb|ACV73008.1| ALR-1 [Caenorhabditis remanei]
gi|258504807|gb|ACV73009.1| ALR-1 [Caenorhabditis remanei]
gi|258504809|gb|ACV73010.1| ALR-1 [Caenorhabditis remanei]
gi|258504813|gb|ACV73012.1| ALR-1 [Caenorhabditis remanei]
gi|258504815|gb|ACV73013.1| ALR-1 [Caenorhabditis remanei]
gi|258504817|gb|ACV73014.1| ALR-1 [Caenorhabditis remanei]
gi|258504819|gb|ACV73015.1| ALR-1 [Caenorhabditis remanei]
gi|258504821|gb|ACV73016.1| ALR-1 [Caenorhabditis remanei]
gi|258504823|gb|ACV73017.1| ALR-1 [Caenorhabditis remanei]
gi|258504825|gb|ACV73018.1| ALR-1 [Caenorhabditis remanei]
Length = 316
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 25/34 (73%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNG 43
RV+VWF+NRRAK+RK+ER++ + A ++ N
Sbjct: 151 RVQVWFQNRRAKYRKQERSSTHHPYQAPLNIPNS 184
>gi|391338110|ref|XP_003743404.1| PREDICTED: uncharacterized protein LOC100901399 [Metaseiulus
occidentalis]
Length = 789
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 15/18 (83%), Positives = 17/18 (94%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRK ER
Sbjct: 341 RVQVWFQNRRAKWRKAER 358
>gi|354492242|ref|XP_003508258.1| PREDICTED: homeobox protein ARX-like [Cricetulus griseus]
Length = 346
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 15/18 (83%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRKRE+
Sbjct: 155 RVQVWFQNRRAKWRKREK 172
>gi|348507210|ref|XP_003441149.1| PREDICTED: dorsal root ganglia homeobox protein-like [Oreochromis
niloticus]
Length = 308
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 15/20 (75%), Positives = 18/20 (90%)
Query: 10 RVRVWFKNRRAKWRKRERNA 29
RV+VWF+NRRAKWRK ER +
Sbjct: 85 RVQVWFQNRRAKWRKTERGS 104
>gi|148697792|gb|EDL29739.1| aristaless related homeobox gene (Drosophila) [Mus musculus]
Length = 378
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 15/18 (83%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRKRE+
Sbjct: 187 RVQVWFQNRRAKWRKREK 204
>gi|395845575|ref|XP_003795505.1| PREDICTED: homeobox protein unc-4 homolog [Otolemur garnettii]
Length = 532
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 19/31 (61%), Positives = 23/31 (74%), Gaps = 5/31 (16%)
Query: 1 MGELMALWL-----RVRVWFKNRRAKWRKRE 26
M E +AL L RV+VWF+NRRAKWRK+E
Sbjct: 133 MREALALRLDLVESRVQVWFQNRRAKWRKKE 163
>gi|224052522|ref|XP_002187168.1| PREDICTED: dorsal root ganglia homeobox protein [Taeniopygia
guttata]
Length = 261
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 16/22 (72%), Positives = 19/22 (86%)
Query: 10 RVRVWFKNRRAKWRKRERNAMN 31
RV+VWF+NRRAKWRK ER A +
Sbjct: 76 RVQVWFQNRRAKWRKTERGASD 97
>gi|157817853|ref|NP_001103016.1| visual system homeobox 1 [Rattus norvegicus]
gi|149031121|gb|EDL86148.1| rCG37439 [Rattus norvegicus]
Length = 369
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 14/18 (77%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
R++VWF+NRRAKWRKRE+
Sbjct: 211 RIQVWFQNRRAKWRKREK 228
>gi|27807477|ref|NP_777192.1| visual system homeobox 1 [Bos taurus]
gi|25009569|sp|Q9GMA3.1|VSX1_BOVIN RecName: Full=Visual system homeobox 1; AltName: Full=Homeodomain
protein RINX; AltName: Full=Retinal inner nuclear layer
homeobox protein; AltName: Full=Transcription factor
VSX1
gi|9802261|gb|AAF99655.1|AF251032_1 homeodomain protein RINX [Bos taurus]
gi|296481350|tpg|DAA23465.1| TPA: visual system homeobox 1 [Bos taurus]
Length = 365
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 14/18 (77%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
R++VWF+NRRAKWRKRE+
Sbjct: 207 RIQVWFQNRRAKWRKREK 224
>gi|444511440|gb|ELV09886.1| Visual system homeobox 2 [Tupaia chinensis]
Length = 361
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 14/18 (77%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
R++VWF+NRRAKWRKRE+
Sbjct: 191 RIQVWFQNRRAKWRKREK 208
>gi|432090369|gb|ELK23795.1| Homeobox protein aristaless-like 4 [Myotis davidii]
Length = 187
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 16/18 (88%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRKRER
Sbjct: 83 RVQVWFQNRRAKWRKRER 100
>gi|426377453|ref|XP_004055479.1| PREDICTED: visual system homeobox 2 [Gorilla gorilla gorilla]
Length = 361
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 14/18 (77%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
R++VWF+NRRAKWRKRE+
Sbjct: 191 RIQVWFQNRRAKWRKREK 208
>gi|149025151|gb|EDL81518.1| ceh-10 homeo domain containing homolog (C. elegans), isoform CRA_b
[Rattus norvegicus]
Length = 380
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 14/18 (77%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
R++VWF+NRRAKWRKRE+
Sbjct: 191 RIQVWFQNRRAKWRKREK 208
>gi|34365783|ref|NP_878314.1| visual system homeobox 2 [Homo sapiens]
gi|17374365|sp|P58304.1|VSX2_HUMAN RecName: Full=Visual system homeobox 2; AltName: Full=Ceh-10
homeodomain-containing homolog; AltName: Full=Homeobox
protein CHX10
gi|33285958|gb|AAQ01593.1| ceh-10 homeodomain containing protein [Homo sapiens]
gi|118764289|gb|AAI28154.1| Visual system homeobox 2 [Homo sapiens]
gi|119601570|gb|EAW81164.1| ceh-10 homeodomain containing homolog (C. elegans), isoform CRA_b
[Homo sapiens]
Length = 361
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 14/18 (77%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
R++VWF+NRRAKWRKRE+
Sbjct: 191 RIQVWFQNRRAKWRKREK 208
>gi|348573366|ref|XP_003472462.1| PREDICTED: visual system homeobox 2 [Cavia porcellus]
Length = 360
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 14/18 (77%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
R++VWF+NRRAKWRKRE+
Sbjct: 191 RIQVWFQNRRAKWRKREK 208
>gi|297260462|ref|XP_002798304.1| PREDICTED: visual system homeobox 1-like, partial [Macaca mulatta]
Length = 354
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 14/18 (77%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
R++VWF+NRRAKWRKRE+
Sbjct: 196 RIQVWFQNRRAKWRKREK 213
>gi|296215495|ref|XP_002754149.1| PREDICTED: visual system homeobox 2 isoform 1 [Callithrix jacchus]
Length = 361
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 14/18 (77%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
R++VWF+NRRAKWRKRE+
Sbjct: 191 RIQVWFQNRRAKWRKREK 208
>gi|291230672|ref|XP_002735289.1| PREDICTED: dorsal root ganglia homeobox-like [Saccoglossus
kowalevskii]
Length = 310
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 15/18 (83%), Positives = 17/18 (94%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRK ER
Sbjct: 92 RVQVWFQNRRAKWRKMER 109
>gi|281306708|ref|NP_001162599.1| visual system homeobox 2 [Rattus norvegicus]
gi|149025150|gb|EDL81517.1| ceh-10 homeo domain containing homolog (C. elegans), isoform CRA_a
[Rattus norvegicus]
Length = 361
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 14/18 (77%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
R++VWF+NRRAKWRKRE+
Sbjct: 191 RIQVWFQNRRAKWRKREK 208
>gi|33416571|gb|AAH55588.1| Vsx2 protein [Danio rerio]
gi|182891268|gb|AAI64202.1| Vsx2 protein [Danio rerio]
Length = 372
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 14/18 (77%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
R++VWF+NRRAKWRKRE+
Sbjct: 208 RIQVWFQNRRAKWRKREK 225
>gi|440808062|gb|AGC24174.1| Drgx [Lymnaea stagnalis]
Length = 416
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 15/18 (83%), Positives = 17/18 (94%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRK ER
Sbjct: 91 RVQVWFQNRRAKWRKSER 108
>gi|340730419|gb|AEK64850.1| aristaless-like homeobox protein [Branchiostoma floridae]
Length = 300
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/32 (59%), Positives = 23/32 (71%), Gaps = 5/32 (15%)
Query: 1 MGELMAL-----WLRVRVWFKNRRAKWRKRER 27
M E +AL RV+VWF+NRRAKWRK+ER
Sbjct: 141 MREQLALRADLTEARVQVWFQNRRAKWRKKER 172
>gi|391331999|ref|XP_003740426.1| PREDICTED: uncharacterized protein LOC100907788 [Metaseiulus
occidentalis]
Length = 330
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/27 (66%), Positives = 23/27 (85%), Gaps = 2/27 (7%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAA 36
RV+VWF NRRAKWR+ +R MNA+AA+
Sbjct: 300 RVQVWFSNRRAKWRRHQR--MNASAAS 324
>gi|348504630|ref|XP_003439864.1| PREDICTED: diencephalon/mesencephalon homeobox protein 1-B-like
isoform 2 [Oreochromis niloticus]
Length = 400
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 27/48 (56%), Gaps = 11/48 (22%)
Query: 10 RVRVWFKNRRAKWRKRERN-----------AMNAAAAAAVDFKNGFST 46
RV+VWFKNRRAK+RK++R+ AA A D KN +T
Sbjct: 114 RVQVWFKNRRAKFRKKQRSLQKEQLQKQKETQGAAEGATEDSKNDLTT 161
>gi|348504628|ref|XP_003439863.1| PREDICTED: diencephalon/mesencephalon homeobox protein 1-B-like
isoform 1 [Oreochromis niloticus]
Length = 395
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 27/48 (56%), Gaps = 11/48 (22%)
Query: 10 RVRVWFKNRRAKWRKRERN-----------AMNAAAAAAVDFKNGFST 46
RV+VWFKNRRAK+RK++R+ AA A D KN +T
Sbjct: 109 RVQVWFKNRRAKFRKKQRSLQKEQLQKQKETQGAAEGATEDSKNDLTT 156
>gi|332259353|ref|XP_003278751.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein unc-4 homolog
[Nomascus leucogenys]
Length = 504
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 19/31 (61%), Positives = 23/31 (74%), Gaps = 5/31 (16%)
Query: 1 MGELMALWL-----RVRVWFKNRRAKWRKRE 26
M E +AL L RV+VWF+NRRAKWRK+E
Sbjct: 135 MREALALRLDLVESRVQVWFQNRRAKWRKKE 165
>gi|308494817|ref|XP_003109597.1| CRE-ALR-1 protein [Caenorhabditis remanei]
gi|308245787|gb|EFO89739.1| CRE-ALR-1 protein [Caenorhabditis remanei]
Length = 362
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 25/34 (73%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNG 43
RV+VWF+NRRAK+RK+ER++ + A ++ N
Sbjct: 160 RVQVWFQNRRAKYRKQERSSTHHPYQAPLNIPNS 193
>gi|260791952|ref|XP_002590991.1| Q50 paired-like homeodomain transcription factor [Branchiostoma
floridae]
gi|229276191|gb|EEN47002.1| Q50 paired-like homeodomain transcription factor [Branchiostoma
floridae]
Length = 300
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/32 (59%), Positives = 23/32 (71%), Gaps = 5/32 (15%)
Query: 1 MGELMAL-----WLRVRVWFKNRRAKWRKRER 27
M E +AL RV+VWF+NRRAKWRK+ER
Sbjct: 141 MREQLALRADLTEARVQVWFQNRRAKWRKKER 172
>gi|198473724|ref|XP_001356417.2| GA15485 [Drosophila pseudoobscura pseudoobscura]
gi|198138080|gb|EAL33481.2| GA15485 [Drosophila pseudoobscura pseudoobscura]
Length = 527
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 15/18 (83%), Positives = 17/18 (94%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV VWFKNRRAKWRK++R
Sbjct: 431 RVEVWFKNRRAKWRKQKR 448
>gi|195147182|ref|XP_002014559.1| GL19249 [Drosophila persimilis]
gi|194106512|gb|EDW28555.1| GL19249 [Drosophila persimilis]
Length = 531
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 15/18 (83%), Positives = 17/18 (94%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV VWFKNRRAKWRK++R
Sbjct: 435 RVEVWFKNRRAKWRKQKR 452
>gi|390469312|ref|XP_003734085.1| PREDICTED: visual system homeobox 2 isoform 2 [Callithrix jacchus]
Length = 380
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 14/18 (77%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
R++VWF+NRRAKWRKRE+
Sbjct: 191 RIQVWFQNRRAKWRKREK 208
>gi|340730421|gb|AEK64851.1| aristaless-like homeobox protein [Branchiostoma floridae]
Length = 300
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 15/18 (83%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRK+ER
Sbjct: 155 RVQVWFQNRRAKWRKKER 172
>gi|332223279|ref|XP_003260794.1| PREDICTED: visual system homeobox 2 [Nomascus leucogenys]
Length = 361
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 14/18 (77%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
R++VWF+NRRAKWRKRE+
Sbjct: 191 RIQVWFQNRRAKWRKREK 208
>gi|221119369|ref|XP_002160848.1| PREDICTED: homeobox protein aristaless-like isoform 2 [Hydra
magnipapillata]
Length = 210
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 16/23 (69%), Positives = 20/23 (86%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNA 32
RV+VWF+NRRAKWRKRE+ + N
Sbjct: 64 RVQVWFQNRRAKWRKREKLSYNV 86
>gi|45767814|gb|AAH67664.1| Vsx2 protein [Danio rerio]
Length = 372
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 14/18 (77%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
R++VWF+NRRAKWRKRE+
Sbjct: 208 RIQVWFQNRRAKWRKREK 225
>gi|449673715|ref|XP_002156720.2| PREDICTED: uncharacterized protein LOC100198428 [Hydra
magnipapillata]
Length = 609
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 5/79 (6%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPD 57
E++AL L R++VWF+NRRAKWRK ERN + ++ T+ L P+
Sbjct: 171 EVLALKLEIAESRIQVWFQNRRAKWRKAERNLLINNNIDNTQVESKSKTENLSLKHKIPN 230
Query: 58 TDSLYTSAYSSYNNWASKV 76
S + +N A+ +
Sbjct: 231 AAKEELSTVAITDNSAASI 249
>gi|410902843|ref|XP_003964903.1| PREDICTED: homeobox protein unc-4 homolog [Takifugu rubripes]
Length = 479
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 19/31 (61%), Positives = 23/31 (74%), Gaps = 5/31 (16%)
Query: 1 MGELMALWL-----RVRVWFKNRRAKWRKRE 26
M E +AL L RV+VWF+NRRAKWRK+E
Sbjct: 129 MREALALRLDLIESRVQVWFQNRRAKWRKKE 159
>gi|122937321|ref|NP_001073930.1| homeobox protein unc-4 homolog [Homo sapiens]
gi|189037644|sp|A6NJT0.1|UNC4_HUMAN RecName: Full=Homeobox protein unc-4 homolog; AltName:
Full=Homeobox protein Uncx4.1
Length = 531
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 19/31 (61%), Positives = 23/31 (74%), Gaps = 5/31 (16%)
Query: 1 MGELMALWL-----RVRVWFKNRRAKWRKRE 26
M E +AL L RV+VWF+NRRAKWRK+E
Sbjct: 134 MREALALRLDLVESRVQVWFQNRRAKWRKKE 164
>gi|62550676|gb|AAX88801.1| homeodomain transcription factor [Astyanax mexicanus]
Length = 378
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 14/18 (77%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
R++VWF+NRRAKWRKRE+
Sbjct: 200 RIQVWFQNRRAKWRKREK 217
>gi|403264646|ref|XP_003924586.1| PREDICTED: visual system homeobox 2 [Saimiri boliviensis
boliviensis]
Length = 361
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 14/18 (77%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
R++VWF+NRRAKWRKRE+
Sbjct: 191 RIQVWFQNRRAKWRKREK 208
>gi|395518788|ref|XP_003763539.1| PREDICTED: homeobox protein ARX [Sarcophilus harrisii]
Length = 339
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 15/18 (83%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRKRE+
Sbjct: 148 RVQVWFQNRRAKWRKREK 165
>gi|395503905|ref|XP_003756302.1| PREDICTED: visual system homeobox 2 [Sarcophilus harrisii]
Length = 388
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 14/18 (77%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
R++VWF+NRRAKWRKRE+
Sbjct: 191 RIQVWFQNRRAKWRKREK 208
>gi|355778727|gb|EHH63763.1| hypothetical protein EGM_16797 [Macaca fascicularis]
Length = 361
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 14/18 (77%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
R++VWF+NRRAKWRKRE+
Sbjct: 191 RIQVWFQNRRAKWRKREK 208
>gi|348540080|ref|XP_003457516.1| PREDICTED: visual system homeobox 1-like [Oreochromis niloticus]
Length = 306
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 14/18 (77%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
R++VWF+NRRAKWRKRE+
Sbjct: 142 RIQVWFQNRRAKWRKREK 159
>gi|297695507|ref|XP_002824979.1| PREDICTED: visual system homeobox 2 [Pongo abelii]
Length = 361
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 14/18 (77%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
R++VWF+NRRAKWRKRE+
Sbjct: 191 RIQVWFQNRRAKWRKREK 208
>gi|291406777|ref|XP_002719697.1| PREDICTED: visual system homeobox 2 [Oryctolagus cuniculus]
Length = 363
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 14/18 (77%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
R++VWF+NRRAKWRKRE+
Sbjct: 191 RIQVWFQNRRAKWRKREK 208
>gi|126282720|ref|XP_001375386.1| PREDICTED: visual system homeobox 2-like [Monodelphis domestica]
Length = 368
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 14/18 (77%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
R++VWF+NRRAKWRKRE+
Sbjct: 191 RIQVWFQNRRAKWRKREK 208
>gi|114681337|ref|XP_001149985.1| PREDICTED: visual system homeobox 1 isoform 2 [Pan troglodytes]
gi|397518460|ref|XP_003829404.1| PREDICTED: visual system homeobox 1 isoform 1 [Pan paniscus]
Length = 365
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 14/18 (77%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
R++VWF+NRRAKWRKRE+
Sbjct: 207 RIQVWFQNRRAKWRKREK 224
>gi|112820188|gb|ABI23975.1| visual system homeobox 1 transcript variant 3 [Homo sapiens]
Length = 280
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 14/18 (77%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
R++VWF+NRRAKWRKRE+
Sbjct: 207 RIQVWFQNRRAKWRKREK 224
>gi|109084302|ref|XP_001093608.1| PREDICTED: visual system homeobox 2-like [Macaca mulatta]
gi|402876695|ref|XP_003902092.1| PREDICTED: visual system homeobox 2 [Papio anubis]
Length = 361
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 14/18 (77%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
R++VWF+NRRAKWRKRE+
Sbjct: 191 RIQVWFQNRRAKWRKREK 208
>gi|37590469|gb|AAH58806.1| Vsx2 protein [Mus musculus]
gi|148670862|gb|EDL02809.1| C. elegans ceh-10 homeo domain containing homolog, isoform CRA_a
[Mus musculus]
Length = 380
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 14/18 (77%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
R++VWF+NRRAKWRKRE+
Sbjct: 191 RIQVWFQNRRAKWRKREK 208
>gi|6671750|ref|NP_031727.1| visual system homeobox 2 [Mus musculus]
gi|3023595|sp|Q61412.1|VSX2_MOUSE RecName: Full=Visual system homeobox 2; AltName: Full=Ceh-10
homeodomain-containing homolog; AltName: Full=Homeobox
protein CHX10
gi|623166|gb|AAA60431.1| homeobox protein [Mus musculus]
gi|21594726|gb|AAH31869.1| Visual system homeobox 2 [Mus musculus]
gi|37589096|gb|AAH51245.2| Visual system homeobox 2 [Mus musculus]
gi|74228635|dbj|BAE25386.1| unnamed protein product [Mus musculus]
gi|148670863|gb|EDL02810.1| C. elegans ceh-10 homeo domain containing homolog, isoform CRA_b
[Mus musculus]
Length = 361
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 14/18 (77%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
R++VWF+NRRAKWRKRE+
Sbjct: 191 RIQVWFQNRRAKWRKREK 208
>gi|18203021|sp|Q9I9D5.1|RX1_ASTFA RecName: Full=Retinal homeobox protein Rx1
gi|8099680|gb|AAF72201.1|AF264703_1 retinal homeobox protein [Astyanax mexicanus]
Length = 334
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 17/31 (54%), Positives = 25/31 (80%), Gaps = 2/31 (6%)
Query: 9 LRVRVWFKNRRAKWRKRERNAMNAAAAAAVD 39
+RV+VWF+NRRAKWR++E+ M+A+A D
Sbjct: 184 VRVQVWFQNRRAKWRRQEK--MDASAVKLHD 212
>gi|119607605|gb|EAW87199.1| hCG1642481 [Homo sapiens]
Length = 531
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 19/31 (61%), Positives = 23/31 (74%), Gaps = 5/31 (16%)
Query: 1 MGELMALWL-----RVRVWFKNRRAKWRKRE 26
M E +AL L RV+VWF+NRRAKWRK+E
Sbjct: 134 MREALALRLDLVESRVQVWFQNRRAKWRKKE 164
>gi|402883434|ref|XP_003905223.1| PREDICTED: visual system homeobox 1 isoform 1 [Papio anubis]
Length = 365
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 14/18 (77%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
R++VWF+NRRAKWRKRE+
Sbjct: 207 RIQVWFQNRRAKWRKREK 224
>gi|383857829|ref|XP_003704406.1| PREDICTED: uncharacterized protein LOC100876054 [Megachile
rotundata]
Length = 503
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 15/18 (83%), Positives = 17/18 (94%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRK ER
Sbjct: 219 RVQVWFQNRRAKWRKSER 236
>gi|332223738|ref|XP_003261026.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein ARX [Nomascus
leucogenys]
Length = 474
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 15/18 (83%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRKRE+
Sbjct: 283 RVQVWFQNRRAKWRKREK 300
>gi|338717161|ref|XP_001500343.3| PREDICTED: dorsal root ganglia homeobox protein-like [Equus
caballus]
Length = 265
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 16/20 (80%), Positives = 18/20 (90%)
Query: 10 RVRVWFKNRRAKWRKRERNA 29
RV+VWF+NRRAKWRK ER A
Sbjct: 78 RVQVWFQNRRAKWRKTERGA 97
>gi|301776410|ref|XP_002923607.1| PREDICTED: retina and anterior neural fold homeobox protein 2-like
[Ailuropoda melanoleuca]
gi|281337977|gb|EFB13561.1| hypothetical protein PANDA_012800 [Ailuropoda melanoleuca]
Length = 184
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 25/40 (62%)
Query: 9 LRVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQF 48
+RV+VWF+NRRAKWR++ER + A AA + F
Sbjct: 69 VRVQVWFQNRRAKWRRQERLESGSRAVAAPRLPEAPALPF 108
>gi|328703933|ref|XP_001942790.2| PREDICTED: diencephalon/mesencephalon homeobox protein 1-B-like
[Acyrthosiphon pisum]
Length = 408
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 15/18 (83%), Positives = 17/18 (94%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRK ER
Sbjct: 94 RVQVWFQNRRAKWRKAER 111
>gi|311250806|ref|XP_003124306.1| PREDICTED: homeobox protein unc-4 homolog [Sus scrofa]
Length = 398
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 19/31 (61%), Positives = 23/31 (74%), Gaps = 5/31 (16%)
Query: 1 MGELMALWL-----RVRVWFKNRRAKWRKRE 26
M E +AL L RV+VWF+NRRAKWRK+E
Sbjct: 139 MREALALRLDLVESRVQVWFQNRRAKWRKKE 169
>gi|348509388|ref|XP_003442231.1| PREDICTED: homeobox protein unc-4 homolog [Oreochromis niloticus]
Length = 491
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 19/31 (61%), Positives = 23/31 (74%), Gaps = 5/31 (16%)
Query: 1 MGELMALWL-----RVRVWFKNRRAKWRKRE 26
M E +AL L RV+VWF+NRRAKWRK+E
Sbjct: 129 MREALALRLDLIESRVQVWFQNRRAKWRKKE 159
>gi|296470543|tpg|DAA12658.1| TPA: Aristaless-related homeobox 2-like [Bos taurus]
Length = 364
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 15/18 (83%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRKRE+
Sbjct: 173 RVQVWFQNRRAKWRKREK 190
>gi|270005291|gb|EFA01739.1| hypothetical protein TcasGA2_TC007335 [Tribolium castaneum]
Length = 235
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNG 43
R++VWF+NRRAK+RK+E+ A A + + NG
Sbjct: 107 RIQVWFQNRRAKYRKQEKQLQKALAPSVLPGCNG 140
>gi|402862720|ref|XP_003895694.1| PREDICTED: homeobox protein unc-4 homolog [Papio anubis]
Length = 490
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 19/31 (61%), Positives = 23/31 (74%), Gaps = 5/31 (16%)
Query: 1 MGELMALWL-----RVRVWFKNRRAKWRKRE 26
M E +AL L RV+VWF+NRRAKWRK+E
Sbjct: 134 MREALALRLDLVESRVQVWFQNRRAKWRKKE 164
>gi|195450012|ref|XP_002072325.1| GK22387 [Drosophila willistoni]
gi|194168410|gb|EDW83311.1| GK22387 [Drosophila willistoni]
Length = 611
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
Query: 10 RVRVWFKNRRAKWRKRE--RNAMNAAAAAAVDFKNGFSTQFNGLMQTFPDTDSLYTSAYS 67
RV+VWF+NRRAKWRK E R +++ ++ TFP T ++ +
Sbjct: 342 RVQVWFQNRRAKWRKHEPPRKTGYIKTSSSTPPTATLNSSLAPPFATFPQTTTV--TPPG 399
Query: 68 SYNNWAS 74
S ++W S
Sbjct: 400 SMDSWTS 406
>gi|195118212|ref|XP_002003634.1| GI18020 [Drosophila mojavensis]
gi|193914209|gb|EDW13076.1| GI18020 [Drosophila mojavensis]
Length = 538
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 15/18 (83%), Positives = 17/18 (94%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV VWFKNRRAKWRK++R
Sbjct: 436 RVEVWFKNRRAKWRKQKR 453
>gi|403289615|ref|XP_003935946.1| PREDICTED: homeobox protein ESX1 [Saimiri boliviensis boliviensis]
Length = 292
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 19/31 (61%), Positives = 23/31 (74%), Gaps = 2/31 (6%)
Query: 10 RVRVWFKNRRAKWRKRERNAM--NAAAAAAV 38
RV+VWF+NRRAKWR+ +R M N AAA V
Sbjct: 155 RVQVWFQNRRAKWRRNQRMLMLRNMAAAPLV 185
>gi|149737510|ref|XP_001490503.1| PREDICTED: visual system homeobox 2-like [Equus caballus]
Length = 361
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 14/18 (77%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
R++VWF+NRRAKWRKRE+
Sbjct: 191 RIQVWFQNRRAKWRKREK 208
>gi|402883436|ref|XP_003905224.1| PREDICTED: visual system homeobox 1 isoform 2 [Papio anubis]
Length = 280
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 14/18 (77%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
R++VWF+NRRAKWRKRE+
Sbjct: 207 RIQVWFQNRRAKWRKREK 224
>gi|301757789|ref|XP_002914738.1| PREDICTED: visual system homeobox 2-like [Ailuropoda melanoleuca]
gi|281351428|gb|EFB27012.1| hypothetical protein PANDA_002665 [Ailuropoda melanoleuca]
Length = 362
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 14/18 (77%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
R++VWF+NRRAKWRKRE+
Sbjct: 191 RIQVWFQNRRAKWRKREK 208
>gi|432856452|ref|XP_004068428.1| PREDICTED: retinal homeobox protein Rx1-like [Oryzias latipes]
Length = 344
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 16/26 (61%), Positives = 24/26 (92%), Gaps = 2/26 (7%)
Query: 9 LRVRVWFKNRRAKWRKRERNAMNAAA 34
+RV+VWF+NRRAKWR++E+ M+A+A
Sbjct: 185 VRVQVWFQNRRAKWRRQEK--MDASA 208
>gi|405965818|gb|EKC31172.1| Homeobox protein aristaless [Crassostrea gigas]
Length = 332
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 14/18 (77%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRK+E+
Sbjct: 160 RVQVWFQNRRAKWRKKEK 177
>gi|383861924|ref|XP_003706434.1| PREDICTED: retinal homeobox protein Rx-like [Megachile rotundata]
Length = 281
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 40/86 (46%), Gaps = 17/86 (19%)
Query: 9 LRVRVWFKNRRAKWRKRERNAMNAAAAA-----AVDFKNGFSTQFN----------GLMQ 53
+RV+VWF+NRRAKWR++E+ M AA A + +N GL+
Sbjct: 133 VRVQVWFQNRRAKWRRQEK--MEAARLGLSEYHAANMRNVAGPALGLPGDPWLTPPGLLS 190
Query: 54 TFPDTDSLYTSAYSSYNNWASKVPSP 79
P + + Y SY ++PSP
Sbjct: 191 ALPGFLAAPHTGYPSYLTSPRRLPSP 216
>gi|326923683|ref|XP_003208064.1| PREDICTED: dorsal root ganglia homeobox protein-like [Meleagris
gallopavo]
Length = 299
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 16/22 (72%), Positives = 19/22 (86%)
Query: 10 RVRVWFKNRRAKWRKRERNAMN 31
RV+VWF+NRRAKWRK ER A +
Sbjct: 115 RVQVWFQNRRAKWRKTERGASD 136
>gi|195470310|ref|XP_002087451.1| GE16946 [Drosophila yakuba]
gi|194173552|gb|EDW87163.1| GE16946 [Drosophila yakuba]
Length = 353
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 14/18 (77%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRK+E+
Sbjct: 48 RVQVWFQNRRAKWRKQEK 65
>gi|195032852|ref|XP_001988574.1| GH10501 [Drosophila grimshawi]
gi|193904574|gb|EDW03441.1| GH10501 [Drosophila grimshawi]
Length = 565
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 15/18 (83%), Positives = 17/18 (94%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV VWFKNRRAKWRK++R
Sbjct: 471 RVEVWFKNRRAKWRKQKR 488
>gi|432904372|ref|XP_004077298.1| PREDICTED: visual system homeobox 1-like [Oryzias latipes]
Length = 321
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 14/18 (77%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
R++VWF+NRRAKWRKRE+
Sbjct: 163 RIQVWFQNRRAKWRKREK 180
>gi|297706526|ref|XP_002830085.1| PREDICTED: visual system homeobox 1 isoform 1 [Pongo abelii]
Length = 365
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 14/18 (77%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
R++VWF+NRRAKWRKRE+
Sbjct: 207 RIQVWFQNRRAKWRKREK 224
>gi|3024855|sp|Q90277.1|VSX1_CARAU RecName: Full=Visual system homeobox 1; AltName: Full=Homeobox
protein VSX-1; AltName: Full=Transcription factor VSX1
gi|460928|gb|AAC24600.1| Vsx-1 homeobox protein [Carassius auratus]
Length = 341
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 14/18 (77%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
R++VWF+NRRAKWRKRE+
Sbjct: 191 RIQVWFQNRRAKWRKREK 208
>gi|431901319|gb|ELK08346.1| Dorsal root ganglia homeobox protein [Pteropus alecto]
Length = 381
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 16/25 (64%), Positives = 18/25 (72%)
Query: 12 RVWFKNRRAKWRKRERNAMNAAAAA 36
RVWF+NRRAKWRK ER A + A
Sbjct: 117 RVWFQNRRAKWRKTERGASDQEPGA 141
>gi|62183710|gb|AAX73253.1| Uncx4.1 [Danio rerio]
Length = 470
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 19/31 (61%), Positives = 23/31 (74%), Gaps = 5/31 (16%)
Query: 1 MGELMALWL-----RVRVWFKNRRAKWRKRE 26
M E +AL L RV+VWF+NRRAKWRK+E
Sbjct: 130 MREALALRLDLVESRVQVWFQNRRAKWRKKE 160
>gi|395857545|ref|XP_003801152.1| PREDICTED: visual system homeobox 1 [Otolemur garnettii]
Length = 365
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 14/18 (77%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
R++VWF+NRRAKWRKRE+
Sbjct: 207 RIQVWFQNRRAKWRKREK 224
>gi|395853430|ref|XP_003799213.1| PREDICTED: homeobox protein prophet of Pit-1-like [Otolemur
garnettii]
Length = 226
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 7/59 (11%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPDTDSLYTSAYSS 68
R++VWF+NRRAK RK ER+ + A + T F+G + P YT++ S
Sbjct: 112 RIQVWFQNRRAKQRKHERSLLQPLAHLS-------PTTFSGFLPESPACPYSYTTSPPS 163
>gi|311271509|ref|XP_003133155.1| PREDICTED: LOW QUALITY PROTEIN: dorsal root ganglia homeobox
protein-like [Sus scrofa]
Length = 263
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 17/27 (62%), Positives = 19/27 (70%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAA 36
RV+VWF+NRRAKWRK ER A A
Sbjct: 76 RVQVWFQNRRAKWRKTERGASEQEPGA 102
>gi|195437556|ref|XP_002066706.1| GK24629 [Drosophila willistoni]
gi|194162791|gb|EDW77692.1| GK24629 [Drosophila willistoni]
Length = 460
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 15/18 (83%), Positives = 17/18 (94%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV VWFKNRRAKWRK++R
Sbjct: 353 RVEVWFKNRRAKWRKQKR 370
>gi|426391205|ref|XP_004061971.1| PREDICTED: visual system homeobox 1 isoform 4 [Gorilla gorilla
gorilla]
Length = 280
Score = 40.0 bits (92), Expect = 0.15, Method: Composition-based stats.
Identities = 14/18 (77%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
R++VWF+NRRAKWRKRE+
Sbjct: 207 RIQVWFQNRRAKWRKREK 224
>gi|89148056|gb|ABD62780.1| Rx homeobox protein [Branchiostoma lanceolatum]
Length = 106
Score = 40.0 bits (92), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 38/72 (52%), Gaps = 10/72 (13%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFN-GLMQTFPDTDSLYTSAYSS 68
RV+VWF+NRRAKWRKRE++ + V+F +G + + G F D +T
Sbjct: 43 RVQVWFQNRRAKWRKREKHLHD---MGDVEFPDGSRERLHYGPFSRF-DPPRAFTPLPP- 97
Query: 69 YNNWASKVPSPL 80
A VP+PL
Sbjct: 98 ----ARSVPTPL 105
>gi|345803688|ref|XP_547902.3| PREDICTED: visual system homeobox 2 isoform 1 [Canis lupus
familiaris]
Length = 361
Score = 40.0 bits (92), Expect = 0.15, Method: Composition-based stats.
Identities = 14/18 (77%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
R++VWF+NRRAKWRKRE+
Sbjct: 191 RIQVWFQNRRAKWRKREK 208
>gi|11056038|ref|NP_055403.2| visual system homeobox 1 isoform a [Homo sapiens]
gi|25009572|sp|Q9NZR4.2|VSX1_HUMAN RecName: Full=Visual system homeobox 1; AltName: Full=Homeodomain
protein RINX; AltName: Full=Retinal inner nuclear layer
homeobox protein; AltName: Full=Transcription factor
VSX1
gi|9802263|gb|AAF99656.1|AF251033_1 homeodomain protein RINX, L1 isoform [Homo sapiens]
gi|11055960|gb|AAF37425.2|AF176797_1 transcription factor VSX1 [Homo sapiens]
gi|112820184|gb|ABI23973.1| visual system homeobox 1 transcript variant 1 [Homo sapiens]
gi|116496989|gb|AAI26229.1| Visual system homeobox 1 [Homo sapiens]
gi|119630509|gb|EAX10104.1| visual system homeobox 1 homolog, CHX10-like (zebrafish), isoform
CRA_a [Homo sapiens]
gi|223460502|gb|AAI36498.1| Visual system homeobox 1 [Homo sapiens]
Length = 365
Score = 40.0 bits (92), Expect = 0.15, Method: Composition-based stats.
Identities = 14/18 (77%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
R++VWF+NRRAKWRKRE+
Sbjct: 207 RIQVWFQNRRAKWRKREK 224
>gi|167234388|ref|NP_001107817.1| eyegone [Tribolium castaneum]
Length = 506
Score = 40.0 bits (92), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 31/56 (55%), Gaps = 6/56 (10%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPDTDSLYTSA 65
RV+VWF NRRAKWR+ +R MN ++ + S+ F G + P YT+A
Sbjct: 353 RVQVWFSNRRAKWRRHQR--MNLLKQSSPGPQGSQSSMFGGRLTPSPH----YTAA 402
>gi|270006363|gb|EFA02811.1| eyegone [Tribolium castaneum]
Length = 572
Score = 40.0 bits (92), Expect = 0.15, Method: Composition-based stats.
Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 6/73 (8%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPDTDSLYTSAYSSY 69
RV+VWF NRRAKWR+ +R MN ++ + S+ F G + P YT+A +
Sbjct: 419 RVQVWFSNRRAKWRRHQR--MNLLKQSSPGPQGSQSSMFGGRLTPSPH----YTAASTPG 472
Query: 70 NNWASKVPSPLGT 82
+ ++ P +
Sbjct: 473 SPLTTRTGGPTAS 485
>gi|115647030|ref|XP_781057.2| PREDICTED: uncharacterized protein LOC575572 [Strongylocentrotus
purpuratus]
Length = 446
Score = 40.0 bits (92), Expect = 0.15, Method: Composition-based stats.
Identities = 19/32 (59%), Positives = 24/32 (75%), Gaps = 5/32 (15%)
Query: 1 MGELMALWL-----RVRVWFKNRRAKWRKRER 27
M E +AL L RV+VWF+NRRAKWRK+E+
Sbjct: 227 MREELALRLDLSESRVQVWFQNRRAKWRKKEK 258
>gi|52353979|gb|AAU44354.1| transcription factor VSX1 [Carassius auratus]
Length = 344
Score = 40.0 bits (92), Expect = 0.15, Method: Composition-based stats.
Identities = 14/18 (77%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
R++VWF+NRRAKWRKRE+
Sbjct: 194 RIQVWFQNRRAKWRKREK 211
>gi|361129607|pdb|2L7F|P Chain P, Solution Structure Of The Pitx2 Homeodomain
gi|385867194|pdb|2LKX|A Chain A, Nmr Structure Of The Homeodomain Of Pitx2 In Complex
With A Taatcc Dna Binding Site
Length = 68
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/29 (68%), Positives = 22/29 (75%), Gaps = 5/29 (17%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRE 26
E +A+W RVRVWFKNRRAKWRKRE
Sbjct: 34 EEIAVWTNLTEARVRVWFKNRRAKWRKRE 62
>gi|212288009|gb|ABI34245.3| RT01146p [Drosophila melanogaster]
Length = 424
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 15/18 (83%), Positives = 17/18 (94%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV VWFKNRRAKWRK++R
Sbjct: 334 RVEVWFKNRRAKWRKQKR 351
>gi|300794968|ref|NP_001180179.1| visual system homeobox 2 [Bos taurus]
gi|296483038|tpg|DAA25153.1| TPA: visual system homeobox 2-like [Bos taurus]
Length = 361
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 14/18 (77%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
R++VWF+NRRAKWRKRE+
Sbjct: 191 RIQVWFQNRRAKWRKREK 208
>gi|16905095|ref|NP_473409.1| visual system homeobox 1 [Mus musculus]
gi|25009568|sp|Q91V10.1|VSX1_MOUSE RecName: Full=Visual system homeobox 1; AltName: Full=Homeodomain
protein RINX; AltName: Full=Retinal inner nuclear layer
homeobox protein; AltName: Full=Transcription factor
VSX1
gi|15811381|gb|AAL08947.1|AF395732_1 visual system homeobox 1 [Mus musculus]
gi|15825170|gb|AAL09584.1|AF391757_1 homeodomain protein RINX [Mus musculus]
gi|15825172|gb|AAL09585.1|AF391758_1 homeodomain protein RINX [Mus musculus]
gi|16580161|gb|AAL11431.1| transcription factor VSX1 [Mus musculus]
gi|34785871|gb|AAH57647.1| Visual system homeobox 1 homolog (zebrafish) [Mus musculus]
gi|187953917|gb|AAI38461.1| Vsx1 protein [Mus musculus]
gi|223460705|gb|AAI38457.1| Vsx1 protein [Mus musculus]
Length = 363
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 14/18 (77%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
R++VWF+NRRAKWRKRE+
Sbjct: 214 RIQVWFQNRRAKWRKREK 231
>gi|402883438|ref|XP_003905225.1| PREDICTED: visual system homeobox 1 isoform 3 [Papio anubis]
Length = 301
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 14/18 (77%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
R++VWF+NRRAKWRKRE+
Sbjct: 207 RIQVWFQNRRAKWRKREK 224
>gi|348524927|ref|XP_003449974.1| PREDICTED: visual system homeobox 2-like [Oreochromis niloticus]
Length = 384
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 14/18 (77%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
R++VWF+NRRAKWRKRE+
Sbjct: 213 RIQVWFQNRRAKWRKREK 230
>gi|296200374|ref|XP_002747576.1| PREDICTED: visual system homeobox 1 [Callithrix jacchus]
Length = 364
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 14/18 (77%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
R++VWF+NRRAKWRKRE+
Sbjct: 206 RIQVWFQNRRAKWRKREK 223
>gi|295855150|gb|ADG46024.1| Vsx1 A2 [Carassius auratus]
gi|316936358|gb|ADU60208.1| vsx1A2 [Carassius auratus]
Length = 340
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 14/18 (77%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
R++VWF+NRRAKWRKRE+
Sbjct: 194 RIQVWFQNRRAKWRKREK 211
>gi|383861926|ref|XP_003706435.1| PREDICTED: retinal homeobox protein Rx2-like [Megachile rotundata]
Length = 296
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 14/18 (77%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRK+E+
Sbjct: 111 RVQVWFQNRRAKWRKKEK 128
>gi|307170800|gb|EFN62916.1| Homeobox protein ARX [Camponotus floridanus]
Length = 382
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 14/18 (77%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRK+E+
Sbjct: 111 RVQVWFQNRRAKWRKKEK 128
>gi|328785265|ref|XP_001119852.2| PREDICTED: hypothetical protein LOC724120 [Apis mellifera]
Length = 523
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 15/18 (83%), Positives = 17/18 (94%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRK ER
Sbjct: 232 RVQVWFQNRRAKWRKSER 249
>gi|242006788|ref|XP_002424227.1| restnal homeobox protein Rx-A, putative [Pediculus humanus
corporis]
gi|212507589|gb|EEB11489.1| restnal homeobox protein Rx-A, putative [Pediculus humanus
corporis]
Length = 229
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 15/18 (83%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRKRE+
Sbjct: 9 RVQVWFQNRRAKWRKREK 26
>gi|99028957|ref|NP_001018616.2| homeobox protein unc-4 homolog [Danio rerio]
gi|189037646|sp|Q50D79.2|UNC4_DANRE RecName: Full=Homeobox protein unc-4 homolog; AltName:
Full=Homeobox protein Uncx4.1
gi|94574302|gb|AAI16500.1| Unc4.1 homeobox (C. elegans) [Danio rerio]
Length = 470
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 19/31 (61%), Positives = 23/31 (74%), Gaps = 5/31 (16%)
Query: 1 MGELMALWL-----RVRVWFKNRRAKWRKRE 26
M E +AL L RV+VWF+NRRAKWRK+E
Sbjct: 130 MREALALRLDLVESRVQVWFQNRRAKWRKKE 160
>gi|32880216|ref|NP_872594.1| retina and anterior neural fold homeobox protein 2 [Bos taurus]
gi|75046044|sp|Q7YRX0.1|RAX2_BOVIN RecName: Full=Retina and anterior neural fold homeobox protein 2;
AltName: Full=Q50-type retinal homeobox protein;
AltName: Full=Retina and anterior neural fold
homeobox-like protein 1
gi|32395646|gb|AAP41546.1| Q50-type retinal homeobox [Bos taurus]
gi|296485724|tpg|DAA27839.1| TPA: retina and anterior neural fold homeobox protein 2 [Bos
taurus]
gi|440905907|gb|ELR56224.1| Retina and anterior neural fold homeobox protein 2 [Bos grunniens
mutus]
Length = 184
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 23/29 (79%)
Query: 9 LRVRVWFKNRRAKWRKRERNAMNAAAAAA 37
+RV+VWF+NRRAKWR++ER + A AA
Sbjct: 69 VRVQVWFQNRRAKWRRQERLESGSGAVAA 97
>gi|380023562|ref|XP_003695587.1| PREDICTED: retinal homeobox protein Rx2-like [Apis florea]
Length = 304
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 14/18 (77%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRK+E+
Sbjct: 119 RVQVWFQNRRAKWRKKEK 136
>gi|351710002|gb|EHB12921.1| Homeobox protein unc-4-like protein [Heterocephalus glaber]
Length = 133
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 23/31 (74%), Gaps = 5/31 (16%)
Query: 1 MGELMALWL-----RVRVWFKNRRAKWRKRE 26
M E +AL L RV+VWF+NRRAKWRK+E
Sbjct: 1 MREALALRLDLVESRVQVWFQNRRAKWRKKE 31
>gi|340709846|ref|XP_003393511.1| PREDICTED: retinal homeobox protein Rx1-like [Bombus terrestris]
Length = 304
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 14/18 (77%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRK+E+
Sbjct: 119 RVQVWFQNRRAKWRKKEK 136
>gi|340378028|ref|XP_003387530.1| PREDICTED: retinal homeobox protein Rx-A-like [Amphimedon
queenslandica]
Length = 296
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 19/27 (70%), Positives = 23/27 (85%), Gaps = 2/27 (7%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAA 36
RV+VWF+NRRAKWRKRE+ + AAA A
Sbjct: 121 RVQVWFQNRRAKWRKREK--LIAAADA 145
>gi|307192280|gb|EFN75567.1| Homeobox protein ARX [Harpegnathos saltator]
Length = 299
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 14/18 (77%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRK+E+
Sbjct: 111 RVQVWFQNRRAKWRKKEK 128
>gi|218675700|gb|AAI69334.2| aristaless related homeobox [synthetic construct]
Length = 248
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 15/18 (83%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRKRE+
Sbjct: 57 RVQVWFQNRRAKWRKREK 74
>gi|110749929|ref|XP_001119902.1| PREDICTED: retinal homeobox protein Rx2 [Apis mellifera]
Length = 304
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 14/18 (77%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRK+E+
Sbjct: 119 RVQVWFQNRRAKWRKKEK 136
>gi|449490110|ref|XP_002193636.2| PREDICTED: uncharacterized protein LOC100219224 [Taeniopygia
guttata]
Length = 261
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 16/18 (88%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRKRER
Sbjct: 221 RVQVWFQNRRAKWRKRER 238
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 14/16 (87%), Positives = 16/16 (100%)
Query: 12 RVWFKNRRAKWRKRER 27
+VWF+NRRAKWRKRER
Sbjct: 19 QVWFQNRRAKWRKRER 34
>gi|395831671|ref|XP_003788918.1| PREDICTED: retina and anterior neural fold homeobox protein 2
[Otolemur garnettii]
Length = 184
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 24/40 (60%)
Query: 9 LRVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQF 48
+RV+VWF+NRRAKWR++ER + A A + F
Sbjct: 69 VRVQVWFQNRRAKWRRQERLESGSGAVVAPRLPEASALPF 108
>gi|395543713|ref|XP_003773758.1| PREDICTED: homeobox protein aristaless-like 4 [Sarcophilus
harrisii]
Length = 154
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 16/18 (88%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRKRER
Sbjct: 105 RVQVWFQNRRAKWRKRER 122
>gi|350406116|ref|XP_003487660.1| PREDICTED: retinal homeobox protein Rx1-like [Bombus impatiens]
Length = 305
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 14/18 (77%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRK+E+
Sbjct: 119 RVQVWFQNRRAKWRKKEK 136
>gi|320544499|ref|NP_001097075.2| CG34340 [Drosophila melanogaster]
gi|116875717|gb|ABK30908.1| IP09201p [Drosophila melanogaster]
gi|318068302|gb|ABV53614.2| CG34340 [Drosophila melanogaster]
Length = 587
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 15/18 (83%), Positives = 17/18 (94%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRK ER
Sbjct: 95 RVQVWFQNRRAKWRKAER 112
>gi|410917898|ref|XP_003972423.1| PREDICTED: homeobox protein unc-4 homolog [Takifugu rubripes]
Length = 512
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 19/31 (61%), Positives = 23/31 (74%), Gaps = 5/31 (16%)
Query: 1 MGELMALWL-----RVRVWFKNRRAKWRKRE 26
M E +AL L RV+VWF+NRRAKWRK+E
Sbjct: 131 MREALALRLDLVESRVQVWFQNRRAKWRKKE 161
>gi|353232055|emb|CCD79410.1| homeobox protein aristaless-related [Schistosoma mansoni]
Length = 488
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 16/18 (88%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRKRER
Sbjct: 27 RVQVWFQNRRAKWRKRER 44
>gi|219660952|gb|ACL30968.1| visual system homeobox [Carassius auratus]
gi|229424351|gb|ACQ63564.1| transcription factor VSX1 [Carassius auratus]
Length = 344
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 14/18 (77%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
R++VWF+NRRAKWRKRE+
Sbjct: 194 RIQVWFQNRRAKWRKREK 211
>gi|270010993|gb|EFA07441.1| homeobrain [Tribolium castaneum]
Length = 261
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 15/18 (83%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRKRE+
Sbjct: 107 RVQVWFQNRRAKWRKREK 124
>gi|122892625|gb|ABM67377.1| ALX4 [Hylobates klossii]
Length = 144
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 16/18 (88%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRKRER
Sbjct: 99 RVQVWFQNRRAKWRKRER 116
>gi|432905591|ref|XP_004077452.1| PREDICTED: dorsal root ganglia homeobox protein-like [Oryzias
latipes]
Length = 308
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 15/20 (75%), Positives = 18/20 (90%)
Query: 10 RVRVWFKNRRAKWRKRERNA 29
RV+VWF+NRRAKWRK ER +
Sbjct: 85 RVQVWFQNRRAKWRKTERGS 104
>gi|426391199|ref|XP_004061968.1| PREDICTED: visual system homeobox 1 isoform 1 [Gorilla gorilla
gorilla]
Length = 365
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 14/18 (77%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
R++VWF+NRRAKWRKRE+
Sbjct: 207 RIQVWFQNRRAKWRKREK 224
>gi|410962645|ref|XP_003987879.1| PREDICTED: visual system homeobox 2 [Felis catus]
Length = 464
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 14/18 (77%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
R++VWF+NRRAKWRKRE+
Sbjct: 294 RIQVWFQNRRAKWRKREK 311
>gi|308220102|gb|ADO22623.1| PRD class homeobox transcription factor PRD16 [Mnemiopsis leidyi]
Length = 307
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 14/18 (77%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRKR++
Sbjct: 200 RVQVWFQNRRAKWRKRQK 217
>gi|256080764|ref|XP_002576647.1| homeobox protein aristaless-related [Schistosoma mansoni]
Length = 488
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 16/18 (88%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRKRER
Sbjct: 27 RVQVWFQNRRAKWRKRER 44
>gi|17569327|ref|NP_509860.1| Protein ALR-1 [Caenorhabditis elegans]
gi|3878964|emb|CAA92001.1| Protein ALR-1 [Caenorhabditis elegans]
Length = 362
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNG 43
RV+VWF+NRRAK+RK+ER++ + A + N
Sbjct: 160 RVQVWFQNRRAKYRKQERSSTHHPYQAPMSIPNS 193
>gi|440901719|gb|ELR52608.1| Visual system homeobox 2, partial [Bos grunniens mutus]
Length = 379
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 14/18 (77%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
R++VWF+NRRAKWRKRE+
Sbjct: 210 RIQVWFQNRRAKWRKREK 227
>gi|63028387|gb|AAY27075.1| Pax6 [Oikopleura dioica]
Length = 412
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 36/76 (47%), Gaps = 13/76 (17%)
Query: 10 RVRVWFKNRRAKWRKRE--RNAMNAAAAAAVDFKNGFSTQFNGLMQTFPDTDSLYTSAYS 67
R++VWF NRRAKWR+ E RN A +A + + T+ S +S S
Sbjct: 275 RIQVWFSNRRAKWRREEKMRNRRPATSAHSNSYYPSIKTEH-----------STGSSPVS 323
Query: 68 SYNNWASKVPSPLGTI 83
Y AS +P+P +
Sbjct: 324 GYPAMASGIPNPASAV 339
>gi|17136854|ref|NP_476949.1| goosecoid, isoform A [Drosophila melanogaster]
gi|7296181|gb|AAF51473.1| goosecoid, isoform A [Drosophila melanogaster]
gi|115646581|gb|ABI34211.2| RT01046p [Drosophila melanogaster]
gi|208879498|gb|ACI31294.1| IP21556p [Drosophila melanogaster]
Length = 419
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 15/18 (83%), Positives = 17/18 (94%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV VWFKNRRAKWRK++R
Sbjct: 329 RVEVWFKNRRAKWRKQKR 346
>gi|74178801|dbj|BAE34043.1| unnamed protein product [Mus musculus]
Length = 363
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 14/18 (77%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
R++VWF+NRRAKWRKRE+
Sbjct: 214 RIQVWFQNRRAKWRKREK 231
>gi|291410619|ref|XP_002721593.1| PREDICTED: visual system homeobox 1-like [Oryctolagus cuniculus]
Length = 405
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 14/18 (77%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
R++VWF+NRRAKWRKRE+
Sbjct: 171 RIQVWFQNRRAKWRKREK 188
>gi|194853616|ref|XP_001968194.1| GG24732 [Drosophila erecta]
gi|190660061|gb|EDV57253.1| GG24732 [Drosophila erecta]
Length = 352
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 14/18 (77%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRK+E+
Sbjct: 48 RVQVWFQNRRAKWRKQEK 65
>gi|194758607|ref|XP_001961553.1| GF15026 [Drosophila ananassae]
gi|190615250|gb|EDV30774.1| GF15026 [Drosophila ananassae]
Length = 325
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 14/18 (77%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRK+E+
Sbjct: 48 RVQVWFQNRRAKWRKQEK 65
>gi|355761215|gb|EHH61775.1| hypothetical protein EGM_19864, partial [Macaca fascicularis]
Length = 258
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 28/51 (54%), Gaps = 8/51 (15%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPDTDS 60
RV+VWF+ RRAKWRKRER +N F+ ++ + P TDS
Sbjct: 107 RVQVWFQTRRAKWRKRERYGKMQEG------RNPFTAAYD--ISVLPRTDS 149
>gi|345801489|ref|XP_548725.3| PREDICTED: LOW QUALITY PROTEIN: homeobox protein unc-4 homolog
[Canis lupus familiaris]
Length = 542
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 19/31 (61%), Positives = 23/31 (74%), Gaps = 5/31 (16%)
Query: 1 MGELMALWL-----RVRVWFKNRRAKWRKRE 26
M E +AL L RV+VWF+NRRAKWRK+E
Sbjct: 138 MREALALRLDLVESRVQVWFQNRRAKWRKKE 168
>gi|121484123|gb|ABM54404.1| ALX4 [Pan paniscus]
Length = 146
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 16/18 (88%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRKRER
Sbjct: 101 RVQVWFQNRRAKWRKRER 118
>gi|73989846|ref|XP_850138.1| PREDICTED: visual system homeobox 1 [Canis lupus familiaris]
Length = 363
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 14/18 (77%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
R++VWF+NRRAKWRKRE+
Sbjct: 206 RIQVWFQNRRAKWRKREK 223
>gi|397518464|ref|XP_003829406.1| PREDICTED: visual system homeobox 1 isoform 3 [Pan paniscus]
Length = 301
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 14/18 (77%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
R++VWF+NRRAKWRKRE+
Sbjct: 207 RIQVWFQNRRAKWRKREK 224
>gi|395752027|ref|XP_003779346.1| PREDICTED: visual system homeobox 1 isoform 2 [Pongo abelii]
Length = 301
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 14/18 (77%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
R++VWF+NRRAKWRKRE+
Sbjct: 207 RIQVWFQNRRAKWRKREK 224
>gi|358420016|ref|XP_607652.5| PREDICTED: homeobox protein ARX [Bos taurus]
Length = 411
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 15/18 (83%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRKRE+
Sbjct: 220 RVQVWFQNRRAKWRKREK 237
>gi|91090854|ref|XP_972647.1| PREDICTED: similar to homeobox transcription factor [Tribolium
castaneum]
gi|270014336|gb|EFA10784.1| goosecoid [Tribolium castaneum]
Length = 318
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 15/18 (83%), Positives = 17/18 (94%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV VWFKNRRAKWRK++R
Sbjct: 261 RVEVWFKNRRAKWRKQKR 278
>gi|1708053|sp|P54366.1|GSC_DROME RecName: Full=Homeobox protein goosecoid
gi|1177383|emb|CAA64699.1| gsc [Drosophila melanogaster]
gi|1399587|gb|AAB17948.1| goosecoid [Drosophila melanogaster]
Length = 419
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 15/18 (83%), Positives = 17/18 (94%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV VWFKNRRAKWRK++R
Sbjct: 329 RVEVWFKNRRAKWRKQKR 346
>gi|56694812|gb|AAW23068.1| Unc-4 [Oikopleura dioica]
Length = 239
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/31 (64%), Positives = 23/31 (74%), Gaps = 5/31 (16%)
Query: 1 MGELMALWL-----RVRVWFKNRRAKWRKRE 26
M E +AL L RV+VWF+NRRAKWRKRE
Sbjct: 122 MREALALRLELAESRVQVWFQNRRAKWRKRE 152
>gi|348581289|ref|XP_003476410.1| PREDICTED: visual system homeobox 1-like [Cavia porcellus]
Length = 425
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 14/18 (77%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
R++VWF+NRRAKWRKRE+
Sbjct: 280 RIQVWFQNRRAKWRKREK 297
>gi|301789383|ref|XP_002930110.1| PREDICTED: hypothetical protein LOC100482646 [Ailuropoda
melanoleuca]
Length = 638
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 22/55 (40%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Query: 2 GELMALWLRVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFP 56
G L RV+VWF+NRRAKWR+ +R A+ A V F F+G P
Sbjct: 507 GRLNLTEARVQVWFQNRRAKWRRHQR-ALMFRNLAPVAFGPPVGVIFDGPYHVIP 560
>gi|195350153|ref|XP_002041606.1| GM16652 [Drosophila sechellia]
gi|194123379|gb|EDW45422.1| GM16652 [Drosophila sechellia]
Length = 419
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 15/18 (83%), Positives = 17/18 (94%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV VWFKNRRAKWRK++R
Sbjct: 329 RVEVWFKNRRAKWRKQKR 346
>gi|335371119|gb|AEH57088.1| goosecoid [Bugula neritina]
Length = 247
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 15/22 (68%), Positives = 18/22 (81%)
Query: 10 RVRVWFKNRRAKWRKRERNAMN 31
RV VWFKNRRAKWRK++R +
Sbjct: 153 RVEVWFKNRRAKWRKQKREHLE 174
>gi|350422605|ref|XP_003493225.1| PREDICTED: hypothetical protein LOC100742723 [Bombus impatiens]
Length = 563
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 15/18 (83%), Positives = 17/18 (94%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRK ER
Sbjct: 282 RVQVWFQNRRAKWRKSER 299
>gi|195388382|ref|XP_002052859.1| GJ19666 [Drosophila virilis]
gi|194149316|gb|EDW65014.1| GJ19666 [Drosophila virilis]
Length = 556
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 15/18 (83%), Positives = 17/18 (94%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV VWFKNRRAKWRK++R
Sbjct: 458 RVEVWFKNRRAKWRKQKR 475
>gi|195350151|ref|XP_002041605.1| GM16755 [Drosophila sechellia]
gi|194123378|gb|EDW45421.1| GM16755 [Drosophila sechellia]
Length = 348
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 14/18 (77%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRK+E+
Sbjct: 48 RVQVWFQNRRAKWRKQEK 65
>gi|47228289|emb|CAG07684.1| unnamed protein product [Tetraodon nigroviridis]
Length = 440
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 31/91 (34%), Positives = 44/91 (48%), Gaps = 14/91 (15%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKN----GFSTQFNGLMQTFPDTDSLY--T 63
RV+VWF NRRA+WRK+ A A+ + F + GF + +Q + +DS Y T
Sbjct: 220 RVQVWFSNRRARWRKQ------AGASQLMAFNHLIPGGFPSSAMSGLQPYQLSDSPYTPT 273
Query: 64 SAYSSYNNWASKV--PSPLGTIGVNDLGFQS 92
S + + S V P PL V+ G S
Sbjct: 274 SISQTPSEQPSTVHRPQPLPPTSVHQNGLNS 304
>gi|56694816|gb|AAW23070.1| Otx-b [Oikopleura dioica]
Length = 377
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%), Gaps = 5/44 (11%)
Query: 1 MGELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVD 39
M E MAL + RV+VWFKNRRAK+R++ ++ N + A V+
Sbjct: 139 MREEMALKIGLPESRVQVWFKNRRAKFRQQNKSPKNNTSNAIVE 182
>gi|80971566|gb|ABB52751.1| Pax-6, partial [Strongylocentrotus droebachiensis]
Length = 384
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 19/81 (23%), Positives = 40/81 (49%), Gaps = 11/81 (13%)
Query: 10 RVRVWFKNRRAKWRKRER-----------NAMNAAAAAAVDFKNGFSTQFNGLMQTFPDT 58
R++VWF NRRAKWR+ E+ ++ +++ + +G+ST + Q P
Sbjct: 236 RIQVWFSNRRAKWRREEKLRNQRRQQAEVGGVHTQSSSHLPLSSGYSTNNVSVYQPIPQP 295
Query: 59 DSLYTSAYSSYNNWASKVPSP 79
+ ++ +++++ P P
Sbjct: 296 SAATMVPRTAPDSYSAIPPMP 316
>gi|195575589|ref|XP_002077660.1| GD23036 [Drosophila simulans]
gi|194189669|gb|EDX03245.1| GD23036 [Drosophila simulans]
Length = 355
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 14/18 (77%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRK+E+
Sbjct: 53 RVQVWFQNRRAKWRKQEK 70
>gi|332016697|gb|EGI57540.1| Homeobox protein ARX [Acromyrmex echinatior]
Length = 287
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 14/18 (77%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRK+E+
Sbjct: 102 RVQVWFQNRRAKWRKKEK 119
>gi|301618086|ref|XP_002938457.1| PREDICTED: homeobox protein unc-4 homolog [Xenopus (Silurana)
tropicalis]
Length = 483
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 19/31 (61%), Positives = 23/31 (74%), Gaps = 5/31 (16%)
Query: 1 MGELMALWL-----RVRVWFKNRRAKWRKRE 26
M E +AL L RV+VWF+NRRAKWRK+E
Sbjct: 130 MREALALRLDLVESRVQVWFQNRRAKWRKKE 160
>gi|357619551|gb|EHJ72077.1| putative paired box protein [Danaus plexippus]
Length = 142
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 21/29 (72%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAV 38
RV+VWF+NRRAK+RK+ER A A V
Sbjct: 9 RVQVWFQNRRAKFRKQERLAQQKAGETPV 37
>gi|156378114|ref|XP_001630989.1| predicted protein [Nematostella vectensis]
gi|156218021|gb|EDO38926.1| predicted protein [Nematostella vectensis]
Length = 180
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 16/18 (88%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRKRER
Sbjct: 57 RVQVWFQNRRAKWRKRER 74
>gi|395501652|ref|XP_003755205.1| PREDICTED: dorsal root ganglia homeobox protein [Sarcophilus
harrisii]
Length = 260
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 16/20 (80%), Positives = 18/20 (90%)
Query: 10 RVRVWFKNRRAKWRKRERNA 29
RV+VWF+NRRAKWRK ER A
Sbjct: 76 RVQVWFQNRRAKWRKTERGA 95
>gi|158632006|gb|ABW75096.1| eyegone protein [Tribolium castaneum]
Length = 311
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 31/56 (55%), Gaps = 6/56 (10%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPDTDSLYTSA 65
RV+VWF NRRAKWR+ +R MN ++ + S+ F G + P YT+A
Sbjct: 158 RVQVWFSNRRAKWRRHQR--MNLLKQSSPGPQGSQSSMFGGRLTPSPH----YTAA 207
>gi|17137502|ref|NP_477330.1| PvuII-PstI homology 13 [Drosophila melanogaster]
gi|4972032|emb|CAB43867.1| Munster protein [Drosophila melanogaster]
gi|7296182|gb|AAF51474.1| PvuII-PstI homology 13 [Drosophila melanogaster]
gi|94400518|gb|ABF17900.1| FI01102p [Drosophila melanogaster]
Length = 357
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 14/18 (77%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRK+E+
Sbjct: 53 RVQVWFQNRRAKWRKQEK 70
>gi|45382115|ref|NP_990100.1| visual system homeobox 1 [Gallus gallus]
gi|25009570|sp|Q9IAL2.1|VSX1_CHICK RecName: Full=Visual system homeobox 1; AltName: Full=Homeobox
protein Chx10-1; AltName: Full=Transcription factor VSX1
gi|7211446|gb|AAF40312.1|AF178670_1 homeobox protein Chx10-1 [Gallus gallus]
Length = 350
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 14/18 (77%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
R++VWF+NRRAKWRKRE+
Sbjct: 200 RIQVWFQNRRAKWRKREK 217
>gi|410054957|ref|XP_003953745.1| PREDICTED: visual system homeobox 1 [Pan troglodytes]
Length = 301
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 14/18 (77%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
R++VWF+NRRAKWRKRE+
Sbjct: 207 RIQVWFQNRRAKWRKREK 224
>gi|335292784|ref|XP_001926687.2| PREDICTED: visual system homeobox 2-like [Sus scrofa]
Length = 394
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 14/18 (77%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
R++VWF+NRRAKWRKRE+
Sbjct: 224 RIQVWFQNRRAKWRKREK 241
>gi|295656520|gb|ADG26723.1| ARX homeobox protein [Platynereis dumerilii]
Length = 283
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 14/18 (77%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRK+E+
Sbjct: 242 RVQVWFQNRRAKWRKKEK 259
>gi|224051483|ref|XP_002199930.1| PREDICTED: uncharacterized protein LOC100220947 [Taeniopygia
guttata]
Length = 464
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 14/18 (77%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
R++VWF+NRRAKWRKRE+
Sbjct: 292 RIQVWFQNRRAKWRKREK 309
>gi|18859553|ref|NP_571408.1| visual system homeobox 1 [Danio rerio]
gi|25009566|sp|O42250.2|VSX1_DANRE RecName: Full=Visual system homeobox 1; AltName: Full=Transcription
factor VSX1
gi|7159413|gb|AAB71611.2| paired-like homeobox protein [Danio rerio]
Length = 344
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 14/18 (77%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
R++VWF+NRRAKWRKRE+
Sbjct: 194 RIQVWFQNRRAKWRKREK 211
>gi|359082023|ref|XP_002700381.2| PREDICTED: homeobox protein ARX [Bos taurus]
Length = 411
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 15/18 (83%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRKRE+
Sbjct: 220 RVQVWFQNRRAKWRKREK 237
>gi|313245408|emb|CBY40145.1| unnamed protein product [Oikopleura dioica]
Length = 352
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%), Gaps = 5/44 (11%)
Query: 1 MGELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVD 39
M E MAL + RV+VWFKNRRAK+R++ ++ N + A V+
Sbjct: 114 MREEMALSIGLPESRVQVWFKNRRAKFRQQNKSPKNNPSNAIVE 157
>gi|301620871|ref|XP_002939787.1| PREDICTED: dorsal root ganglia homeobox protein-like [Xenopus
(Silurana) tropicalis]
Length = 263
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 16/26 (61%), Positives = 19/26 (73%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAA 35
RV+VWF+NRRAKWRK ER + A
Sbjct: 77 RVQVWFQNRRAKWRKTERGSCEQEGA 102
>gi|242008350|ref|XP_002424969.1| restnal homeobox protein Rx1, putative [Pediculus humanus corporis]
gi|212508598|gb|EEB12231.1| restnal homeobox protein Rx1, putative [Pediculus humanus corporis]
Length = 435
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 28/69 (40%), Positives = 35/69 (50%), Gaps = 12/69 (17%)
Query: 10 RVRVWFKNRRAKWRKRE----------RNAMNAAAAAAVDFKNGFSTQFNGL-MQTFPDT 58
RV+VWF+NRRAKWRKRE + NAA + N + FN + PD+
Sbjct: 175 RVQVWFQNRRAKWRKREPPRKTGYTLNTSTTNAALPSTFASLNNTLSPFNASPNSSTPDS 234
Query: 59 DSLYTSAYS 67
S Y S YS
Sbjct: 235 WS-YNSPYS 242
>gi|195437558|ref|XP_002066707.1| GK24418 [Drosophila willistoni]
gi|194162792|gb|EDW77693.1| GK24418 [Drosophila willistoni]
Length = 364
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 14/18 (77%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRK+E+
Sbjct: 48 RVQVWFQNRRAKWRKQEK 65
>gi|195388380|ref|XP_002052858.1| GJ17788 [Drosophila virilis]
gi|194149315|gb|EDW65013.1| GJ17788 [Drosophila virilis]
Length = 378
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 14/18 (77%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRK+E+
Sbjct: 48 RVQVWFQNRRAKWRKQEK 65
>gi|126272861|ref|XP_001366013.1| PREDICTED: dorsal root ganglia homeobox protein-like [Monodelphis
domestica]
Length = 260
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 16/20 (80%), Positives = 18/20 (90%)
Query: 10 RVRVWFKNRRAKWRKRERNA 29
RV+VWF+NRRAKWRK ER A
Sbjct: 76 RVQVWFQNRRAKWRKTERGA 95
>gi|18859207|ref|NP_571352.1| paired box protein Pax-3 [Danio rerio]
gi|2909765|gb|AAC41253.1| transcription factor PAX3 [Danio rerio]
Length = 509
Score = 40.0 bits (92), Expect = 0.20, Method: Composition-based stats.
Identities = 30/86 (34%), Positives = 38/86 (44%), Gaps = 5/86 (5%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPDTDSLY-TSAYSS 68
RV+VWF NRRA+WRK+ N A GF +Q + DS Y S+ S
Sbjct: 263 RVQVWFSNRRARWRKQA--GANQLMAFNHLIPGGFPPSAMSSLQPYQLADSPYPPSSISQ 320
Query: 69 YNNWASKV--PSPLGTIGVNDLGFQS 92
+ S V P PL V+ G S
Sbjct: 321 VSEQPSTVHRPQPLPPTSVHQSGLGS 346
>gi|195117252|ref|XP_002003163.1| GI23866 [Drosophila mojavensis]
gi|193913738|gb|EDW12605.1| GI23866 [Drosophila mojavensis]
Length = 623
Score = 40.0 bits (92), Expect = 0.20, Method: Composition-based stats.
Identities = 15/18 (83%), Positives = 17/18 (94%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRK ER
Sbjct: 112 RVQVWFQNRRAKWRKAER 129
>gi|37748754|gb|AAH59574.1| Vsx1 protein [Danio rerio]
Length = 340
Score = 40.0 bits (92), Expect = 0.20, Method: Composition-based stats.
Identities = 14/18 (77%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
R++VWF+NRRAKWRKRE+
Sbjct: 194 RIQVWFQNRRAKWRKREK 211
>gi|426234271|ref|XP_004011120.1| PREDICTED: visual system homeobox 2 [Ovis aries]
Length = 295
Score = 40.0 bits (92), Expect = 0.20, Method: Composition-based stats.
Identities = 14/18 (77%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
R++VWF+NRRAKWRKRE+
Sbjct: 106 RIQVWFQNRRAKWRKREK 123
>gi|326920799|ref|XP_003206655.1| PREDICTED: visual system homeobox 2-like [Meleagris gallopavo]
Length = 373
Score = 40.0 bits (92), Expect = 0.20, Method: Composition-based stats.
Identities = 14/18 (77%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
R++VWF+NRRAKWRKRE+
Sbjct: 206 RIQVWFQNRRAKWRKREK 223
>gi|194758609|ref|XP_001961554.1| GF14876 [Drosophila ananassae]
gi|190615251|gb|EDV30775.1| GF14876 [Drosophila ananassae]
Length = 496
Score = 40.0 bits (92), Expect = 0.20, Method: Composition-based stats.
Identities = 15/18 (83%), Positives = 17/18 (94%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV VWFKNRRAKWRK++R
Sbjct: 407 RVEVWFKNRRAKWRKQKR 424
>gi|195147184|ref|XP_002014560.1| GL18888 [Drosophila persimilis]
gi|198473726|ref|XP_001356418.2| GA15474 [Drosophila pseudoobscura pseudoobscura]
gi|194106513|gb|EDW28556.1| GL18888 [Drosophila persimilis]
gi|198138081|gb|EAL33482.2| GA15474 [Drosophila pseudoobscura pseudoobscura]
Length = 376
Score = 39.7 bits (91), Expect = 0.20, Method: Composition-based stats.
Identities = 14/18 (77%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRK+E+
Sbjct: 48 RVQVWFQNRRAKWRKQEK 65
>gi|17861402|gb|AAL39178.1| GH01528p [Drosophila melanogaster]
Length = 357
Score = 39.7 bits (91), Expect = 0.20, Method: Composition-based stats.
Identities = 14/18 (77%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRK+E+
Sbjct: 53 RVQVWFQNRRAKWRKQEK 70
>gi|47224832|emb|CAG06402.1| unnamed protein product [Tetraodon nigroviridis]
Length = 523
Score = 39.7 bits (91), Expect = 0.20, Method: Composition-based stats.
Identities = 27/74 (36%), Positives = 38/74 (51%), Gaps = 5/74 (6%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPDTDSLY-TSAYSS 68
RV+VWF NRRA+WRK+ N A GFS+ + ++ +DS Y TS+ +
Sbjct: 303 RVQVWFSNRRARWRKQA--GANQLMAFNHLIPGGFSSPAMASIPSYQLSDSTYPTSSIAQ 360
Query: 69 YNNWASKV--PSPL 80
+ S V P PL
Sbjct: 361 VSEPPSTVHRPQPL 374
>gi|406719566|dbj|BAM45082.1| dorsal root ganglia homeobox, partial [Pelodiscus sinensis]
Length = 199
Score = 39.7 bits (91), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 16/20 (80%), Positives = 18/20 (90%)
Query: 10 RVRVWFKNRRAKWRKRERNA 29
RV+VWF+NRRAKWRK ER A
Sbjct: 67 RVQVWFQNRRAKWRKTERGA 86
>gi|194853624|ref|XP_001968195.1| GG24636 [Drosophila erecta]
gi|190660062|gb|EDV57254.1| GG24636 [Drosophila erecta]
Length = 478
Score = 39.7 bits (91), Expect = 0.20, Method: Composition-based stats.
Identities = 15/18 (83%), Positives = 17/18 (94%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV VWFKNRRAKWRK++R
Sbjct: 388 RVEVWFKNRRAKWRKQKR 405
>gi|49903856|gb|AAH76069.1| Pax3a protein [Danio rerio]
Length = 445
Score = 39.7 bits (91), Expect = 0.20, Method: Composition-based stats.
Identities = 30/86 (34%), Positives = 38/86 (44%), Gaps = 5/86 (5%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPDTDSLY-TSAYSS 68
RV+VWF NRRA+WRK+ N A GF +Q + DS Y S+ S
Sbjct: 263 RVQVWFSNRRARWRKQA--GANQLMAFNHLIPGGFPPSAMSSLQPYQLADSPYPPSSISQ 320
Query: 69 YNNWASKV--PSPLGTIGVNDLGFQS 92
+ S V P PL V+ G S
Sbjct: 321 VSEQPSTVHRPQPLPPTSVHQSGLGS 346
>gi|358336940|dbj|GAA42870.2| homeobox protein unc-4 homolog [Clonorchis sinensis]
Length = 428
Score = 39.7 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 14/17 (82%), Positives = 17/17 (100%)
Query: 10 RVRVWFKNRRAKWRKRE 26
R++VWF+NRRAKWRKRE
Sbjct: 213 RIQVWFQNRRAKWRKRE 229
>gi|410919965|ref|XP_003973454.1| PREDICTED: paired box protein Pax-7-like [Takifugu rubripes]
Length = 447
Score = 39.7 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 25/71 (35%), Positives = 31/71 (43%), Gaps = 2/71 (2%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPDTDSLYTSAYSSY 69
RV+VWF NRRA+WRK+ N AA GF + T+ D+ Y S S
Sbjct: 258 RVQVWFSNRRARWRKQA--GANQLAAFNHLLPGGFPPTGMATLPTYQLPDTGYPSTTLSQ 315
Query: 70 NNWASKVPSPL 80
P PL
Sbjct: 316 EGSTLHRPQPL 326
>gi|432116877|gb|ELK37464.1| Retina and anterior neural fold homeobox protein 2 [Myotis davidii]
Length = 184
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 24/40 (60%)
Query: 9 LRVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQF 48
+RV+VWF+NRRAKWR +ER + A AA + F
Sbjct: 69 VRVQVWFQNRRAKWRHQERLESGSGAVAASRLPEAPALPF 108
>gi|313222928|emb|CBY41838.1| unnamed protein product [Oikopleura dioica]
gi|313234897|emb|CBY24842.1| unnamed protein product [Oikopleura dioica]
Length = 352
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%), Gaps = 5/44 (11%)
Query: 1 MGELMALWL-----RVRVWFKNRRAKWRKRERNAMNAAAAAAVD 39
M E MAL + RV+VWFKNRRAK+R++ ++ N + A V+
Sbjct: 114 MREEMALKIGLPESRVQVWFKNRRAKFRQQNKSPKNNTSNAIVE 157
>gi|242531293|gb|ACS92971.1| Drg11 [Ptychodera flava]
Length = 247
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 15/18 (83%), Positives = 17/18 (94%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRK ER
Sbjct: 32 RVQVWFQNRRAKWRKMER 49
>gi|341903512|gb|EGT59447.1| hypothetical protein CAEBREN_29597 [Caenorhabditis brenneri]
Length = 365
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNG 43
RV+VWF+NRRAK+RK+ER++ + A + N
Sbjct: 160 RVQVWFQNRRAKYRKQERSSTHHPYQAPMTISNS 193
>gi|20502811|gb|AAM22639.1|AF453510_1 prophet of Pit-1 [Bos taurus]
gi|296485511|tpg|DAA27626.1| TPA: homeobox protein prophet of Pit-1 [Bos taurus]
Length = 226
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 43/97 (44%), Gaps = 21/97 (21%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQ---------------------F 48
R++VWF+NRRAK RK+ER+ + A + +GF + +
Sbjct: 112 RIQVWFQNRRAKQRKQERSLLQPLAHLSPATFSGFLPEPPSCPYSYPTPPPPMTCFPHPY 171
Query: 49 NGLMQTFPDTDSLYTSAYSSYNNWASKVPSPLGTIGV 85
N + + P T S + Y S + + + P+P G +
Sbjct: 172 NHALPSQPSTGSSFARPYQSEDWYPNLHPTPAGHLAC 208
>gi|301782575|ref|XP_002926705.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein ARX-like
[Ailuropoda melanoleuca]
Length = 459
Score = 39.7 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 15/18 (83%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRKRE+
Sbjct: 328 RVQVWFQNRRAKWRKREK 345
>gi|221330585|ref|NP_001137762.1| goosecoid, isoform B [Drosophila melanogaster]
gi|220901896|gb|ACL82969.1| goosecoid, isoform B [Drosophila melanogaster]
Length = 485
Score = 39.7 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 15/18 (83%), Positives = 17/18 (94%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV VWFKNRRAKWRK++R
Sbjct: 395 RVEVWFKNRRAKWRKQKR 412
>gi|8393133|ref|NP_058875.1| homeobox protein unc-4 homolog [Rattus norvegicus]
gi|81870610|sp|P97830.1|UNC4_RAT RecName: Full=Homeobox protein unc-4 homolog; AltName:
Full=Homeobox protein Uncx4.1; AltName: Full=Paired-type
homeodomain transcription factor 1
gi|1871471|dbj|BAA13452.1| paired-type homeodomain transcription factor [Rattus norvegicus]
Length = 530
Score = 39.7 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 14/17 (82%), Positives = 17/17 (100%)
Query: 10 RVRVWFKNRRAKWRKRE 26
RV+VWF+NRRAKWRK+E
Sbjct: 152 RVQVWFQNRRAKWRKKE 168
>gi|403263094|ref|XP_003923895.1| PREDICTED: paired mesoderm homeobox protein 2A [Saimiri boliviensis
boliviensis]
Length = 247
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 22/34 (64%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNG 43
RV+VWF+NRRAK+RK+ER A A K G
Sbjct: 133 RVQVWFQNRRAKFRKQERAASAKGTAGTAGAKKG 166
>gi|339248751|ref|XP_003373363.1| homeobox protein goosecoid [Trichinella spiralis]
gi|316970545|gb|EFV54468.1| homeobox protein goosecoid [Trichinella spiralis]
Length = 256
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGF 44
RV VWFKNRRAKWRK++R N A ++ N
Sbjct: 174 RVEVWFKNRRAKWRKQKREE-NEAKKKCMNLSNSH 207
>gi|339255426|ref|XP_003370912.1| putative pituitary homeobox 3 [Trichinella spiralis]
gi|316963535|gb|EFV49107.1| putative pituitary homeobox 3 [Trichinella spiralis]
Length = 196
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 15/18 (83%), Positives = 17/18 (94%)
Query: 13 VWFKNRRAKWRKRERNAM 30
VWFKNRRAKWRKRER+ +
Sbjct: 1 VWFKNRRAKWRKRERHLL 18
>gi|357611334|gb|EHJ67427.1| hypothetical protein KGM_16069 [Danaus plexippus]
Length = 432
Score = 39.7 bits (91), Expect = 0.23, Method: Composition-based stats.
Identities = 15/18 (83%), Positives = 17/18 (94%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRK ER
Sbjct: 197 RVQVWFQNRRAKWRKAER 214
>gi|338724307|ref|XP_001491437.3| PREDICTED: homeobox protein NOBOX [Equus caballus]
Length = 575
Score = 39.7 bits (91), Expect = 0.23, Method: Composition-based stats.
Identities = 19/42 (45%), Positives = 25/42 (59%), Gaps = 5/42 (11%)
Query: 10 RVRVWFKNRRAKWRKRER-----NAMNAAAAAAVDFKNGFST 46
R+ VWF+NRRAKWRK E+ N N A A ++ FS+
Sbjct: 236 RIMVWFQNRRAKWRKVEKLNGKENNDNPAGPAPTPARSQFSS 277
>gi|335307013|ref|XP_003360670.1| PREDICTED: homeobox protein aristaless-like 3-like [Sus scrofa]
Length = 381
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 30/51 (58%), Gaps = 8/51 (15%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPDTDS 60
R +VWF+NRRAKWRKRER + +N F++ ++ + P TDS
Sbjct: 234 RRQVWFQNRRAKWRKRER------YGKIQEGRNPFTSAYD--ISVLPRTDS 276
>gi|194759514|ref|XP_001961992.1| GF15246 [Drosophila ananassae]
gi|190615689|gb|EDV31213.1| GF15246 [Drosophila ananassae]
Length = 589
Score = 39.7 bits (91), Expect = 0.23, Method: Composition-based stats.
Identities = 15/18 (83%), Positives = 17/18 (94%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRK ER
Sbjct: 95 RVQVWFQNRRAKWRKAER 112
>gi|444515967|gb|ELV11025.1| Homeobox protein unc-4 like protein [Tupaia chinensis]
Length = 302
Score = 39.7 bits (91), Expect = 0.23, Method: Composition-based stats.
Identities = 19/31 (61%), Positives = 23/31 (74%), Gaps = 5/31 (16%)
Query: 1 MGELMALWL-----RVRVWFKNRRAKWRKRE 26
M E +AL L RV+VWF+NRRAKWRK+E
Sbjct: 46 MREALALRLDLVESRVQVWFQNRRAKWRKKE 76
>gi|195028334|ref|XP_001987031.1| GH20193 [Drosophila grimshawi]
gi|193903031|gb|EDW01898.1| GH20193 [Drosophila grimshawi]
Length = 219
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 23/29 (79%)
Query: 2 GELMALWLRVRVWFKNRRAKWRKRERNAM 30
+L RV+VWF+NRRAK+RK+ER+A+
Sbjct: 148 SKLHLTEARVQVWFQNRRAKFRKQERHAI 176
>gi|348560754|ref|XP_003466178.1| PREDICTED: dorsal root ganglia homeobox protein-like [Cavia
porcellus]
Length = 263
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 19/27 (70%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAA 36
RV+VWF+NRRAKWRK ER + A
Sbjct: 76 RVQVWFQNRRAKWRKTERGTSDQEPGA 102
>gi|340723862|ref|XP_003400306.1| PREDICTED: hypothetical protein LOC100648767 [Bombus terrestris]
Length = 571
Score = 39.7 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 15/18 (83%), Positives = 17/18 (94%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRK ER
Sbjct: 280 RVQVWFQNRRAKWRKSER 297
>gi|74096025|ref|NP_001027683.1| Prx1 protein [Ciona intestinalis]
gi|13444981|emb|CAC34833.1| Ci-Rx protein [Ciona intestinalis]
Length = 826
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 14/26 (53%), Positives = 22/26 (84%)
Query: 2 GELMALWLRVRVWFKNRRAKWRKRER 27
G++ +RV+VWF+NRRAKWR++E+
Sbjct: 592 GKINLPEVRVQVWFQNRRAKWRRQEK 617
>gi|340369432|ref|XP_003383252.1| PREDICTED: hypothetical protein LOC100635424 [Amphimedon
queenslandica]
Length = 337
Score = 39.7 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 14/18 (77%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRK+E+
Sbjct: 125 RVQVWFQNRRAKWRKKEK 142
>gi|328697098|ref|XP_001944012.2| PREDICTED: retinal homeobox protein Rx-like [Acyrthosiphon pisum]
Length = 290
Score = 39.7 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 17/32 (53%), Positives = 24/32 (75%), Gaps = 2/32 (6%)
Query: 9 LRVRVWFKNRRAKWRKRERNAMNAAAAAAVDF 40
+RV+VWF+NRRAKWR++E+ M AA D+
Sbjct: 139 VRVQVWFQNRRAKWRRQEK--MEAARLGLNDY 168
>gi|270011563|gb|EFA08011.1| hypothetical protein TcasGA2_TC005600 [Tribolium castaneum]
Length = 327
Score = 39.7 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 15/18 (83%), Positives = 17/18 (94%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRK ER
Sbjct: 94 RVQVWFQNRRAKWRKAER 111
>gi|1518214|emb|CAB01921.1| COS2.2 [Ciona intestinalis]
Length = 162
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 19/25 (76%), Positives = 19/25 (76%), Gaps = 2/25 (8%)
Query: 10 RVRVWFKNRRAKWR--KRERNAMNA 32
RV VWFKNRRAKWR KRER M A
Sbjct: 92 RVEVWFKNRRAKWRKQKRERELMKA 116
>gi|17986113|ref|NP_523834.1| putative homeodomain protein [Drosophila melanogaster]
gi|7291665|gb|AAF47087.1| putative homeodomain protein [Drosophila melanogaster]
gi|113204973|gb|ABI34220.1| RT01102p [Drosophila melanogaster]
Length = 220
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 15/21 (71%), Positives = 21/21 (100%)
Query: 10 RVRVWFKNRRAKWRKRERNAM 30
RV+VWF+NRRAK+RK+ER+A+
Sbjct: 155 RVQVWFQNRRAKFRKQERHAI 175
>gi|83318915|emb|CAJ40659.1| Pax6 protein [Platynereis dumerilii]
Length = 449
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 14/85 (16%)
Query: 10 RVRVWFKNRRAKWRKRE------RNAMNAAAAAAVD--FKNGFSTQFNGLMQTFPDTDSL 61
R++VWF NRRAKWR+ E R A N ++ F N + + + PD+
Sbjct: 299 RIQVWFSNRRAKWRREEKLRQQRREAANGGNHIPINSSFPNSMYPSIHQPIVSMPDS--- 355
Query: 62 YTSAYSSYNNWASKVPSPLGTIGVN 86
Y S + S+ +S P P T+ N
Sbjct: 356 YNSGFGSF---SSMPPMPTYTLSNN 377
>gi|195470314|ref|XP_002087453.1| GE15985 [Drosophila yakuba]
gi|194173554|gb|EDW87165.1| GE15985 [Drosophila yakuba]
Length = 528
Score = 39.7 bits (91), Expect = 0.25, Method: Composition-based stats.
Identities = 15/18 (83%), Positives = 17/18 (94%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV VWFKNRRAKWRK++R
Sbjct: 438 RVEVWFKNRRAKWRKQKR 455
>gi|431922297|gb|ELK19388.1| Retina and anterior neural fold homeobox protein 2 [Pteropus
alecto]
Length = 184
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 25/40 (62%)
Query: 9 LRVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQF 48
+RV+VWF+NRRAKWR++ER + A +A + F
Sbjct: 69 VRVQVWFQNRRAKWRRQERLESGSGAMSAPRLPEAPALPF 108
>gi|194754287|ref|XP_001959427.1| GF12058 [Drosophila ananassae]
gi|190620725|gb|EDV36249.1| GF12058 [Drosophila ananassae]
Length = 217
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 15/21 (71%), Positives = 21/21 (100%)
Query: 10 RVRVWFKNRRAKWRKRERNAM 30
RV+VWF+NRRAK+RK+ER+A+
Sbjct: 154 RVQVWFQNRRAKFRKQERHAI 174
>gi|20502815|gb|AAM22641.1| prophet of Pit-1 [Bos taurus]
Length = 226
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 43/97 (44%), Gaps = 21/97 (21%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQ---------------------F 48
R++VWF+NRRAK RK+ER+ + A + +GF + +
Sbjct: 112 RIQVWFQNRRAKQRKQERSLLQPLAHLSPATFSGFLPEPPSCPYSYPTPPPPMTCFPHPY 171
Query: 49 NGLMQTFPDTDSLYTSAYSSYNNWASKVPSPLGTIGV 85
N + + P T S + Y S + + + P+P G +
Sbjct: 172 NXALPSQPSTGSSFARPYQSEDWYPNLHPTPAGHLAC 208
>gi|113204913|gb|ABI34190.1| RT01002p [Drosophila melanogaster]
Length = 220
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 15/21 (71%), Positives = 21/21 (100%)
Query: 10 RVRVWFKNRRAKWRKRERNAM 30
RV+VWF+NRRAK+RK+ER+A+
Sbjct: 155 RVQVWFQNRRAKFRKQERHAI 175
>gi|47230236|emb|CAG10650.1| unnamed protein product [Tetraodon nigroviridis]
Length = 329
Score = 39.7 bits (91), Expect = 0.25, Method: Composition-based stats.
Identities = 13/18 (72%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
R++VWF+NRRAKWRK+E+
Sbjct: 172 RIQVWFQNRRAKWRKKEK 189
>gi|313228835|emb|CBY17986.1| unnamed protein product [Oikopleura dioica]
Length = 280
Score = 39.7 bits (91), Expect = 0.25, Method: Composition-based stats.
Identities = 20/31 (64%), Positives = 23/31 (74%), Gaps = 5/31 (16%)
Query: 1 MGELMALWL-----RVRVWFKNRRAKWRKRE 26
M E +AL L RV+VWF+NRRAKWRKRE
Sbjct: 122 MREALALRLELAESRVQVWFQNRRAKWRKRE 152
>gi|198432262|ref|XP_002120802.1| PREDICTED: transcription factor protein [Ciona intestinalis]
Length = 446
Score = 39.7 bits (91), Expect = 0.25, Method: Composition-based stats.
Identities = 20/31 (64%), Positives = 23/31 (74%), Gaps = 5/31 (16%)
Query: 1 MGELMALWL-----RVRVWFKNRRAKWRKRE 26
M E +AL L RV+VWF+NRRAKWRKRE
Sbjct: 162 MREALALRLDLVESRVQVWFQNRRAKWRKRE 192
>gi|189240302|ref|XP_001813949.1| PREDICTED: similar to CG34340 CG34340-PD [Tribolium castaneum]
Length = 283
Score = 39.7 bits (91), Expect = 0.25, Method: Composition-based stats.
Identities = 15/18 (83%), Positives = 17/18 (94%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRK ER
Sbjct: 112 RVQVWFQNRRAKWRKAER 129
>gi|195586201|ref|XP_002082866.1| GD25001 [Drosophila simulans]
gi|194194875|gb|EDX08451.1| GD25001 [Drosophila simulans]
Length = 220
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 15/21 (71%), Positives = 21/21 (100%)
Query: 10 RVRVWFKNRRAKWRKRERNAM 30
RV+VWF+NRRAK+RK+ER+A+
Sbjct: 155 RVQVWFQNRRAKFRKQERHAI 175
>gi|195431545|ref|XP_002063797.1| GK15860 [Drosophila willistoni]
gi|194159882|gb|EDW74783.1| GK15860 [Drosophila willistoni]
Length = 692
Score = 39.7 bits (91), Expect = 0.25, Method: Composition-based stats.
Identities = 19/39 (48%), Positives = 28/39 (71%), Gaps = 2/39 (5%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAA--AAAAVDFKNGFST 46
RV+VWF+NRRAK+RK+ER+A+ +A +D + ST
Sbjct: 629 RVQVWFQNRRAKFRKQERHAIYIMKDKSAKMDNRKNIST 667
>gi|395514737|ref|XP_003761569.1| PREDICTED: homeobox protein unc-4 homolog, partial [Sarcophilus
harrisii]
Length = 498
Score = 39.7 bits (91), Expect = 0.26, Method: Composition-based stats.
Identities = 19/31 (61%), Positives = 23/31 (74%), Gaps = 5/31 (16%)
Query: 1 MGELMALWL-----RVRVWFKNRRAKWRKRE 26
M E +AL L RV+VWF+NRRAKWRK+E
Sbjct: 93 MREALALRLDLVESRVQVWFQNRRAKWRKKE 123
>gi|347964642|ref|XP_001688966.2| AGAP000858-PA [Anopheles gambiae str. PEST]
gi|333469440|gb|EDO63627.2| AGAP000858-PA [Anopheles gambiae str. PEST]
Length = 692
Score = 39.7 bits (91), Expect = 0.26, Method: Composition-based stats.
Identities = 14/18 (77%), Positives = 17/18 (94%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRK E+
Sbjct: 150 RVQVWFQNRRAKWRKSEK 167
>gi|198455392|ref|XP_001359971.2| GA16115 [Drosophila pseudoobscura pseudoobscura]
gi|198133225|gb|EAL29123.2| GA16115 [Drosophila pseudoobscura pseudoobscura]
Length = 617
Score = 39.7 bits (91), Expect = 0.26, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 36/86 (41%), Gaps = 13/86 (15%)
Query: 10 RVRVWFKNRRAKWRK----RERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPDTDSLYTSA 65
RV+VWF+NRRAKWRK R+ + + + + F QT T +
Sbjct: 345 RVQVWFQNRRAKWRKHEPPRKTGYIKTSTPPTATLNSSLAPPFTSYPQTTTVTPPGSMDS 404
Query: 66 YSSYN---------NWASKVPSPLGT 82
++SY + S SP GT
Sbjct: 405 WTSYQTPYELTPQFSLLSPAASPYGT 430
>gi|195347243|ref|XP_002040163.1| GM15498 [Drosophila sechellia]
gi|194135512|gb|EDW57028.1| GM15498 [Drosophila sechellia]
Length = 220
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 15/21 (71%), Positives = 21/21 (100%)
Query: 10 RVRVWFKNRRAKWRKRERNAM 30
RV+VWF+NRRAK+RK+ER+A+
Sbjct: 155 RVQVWFQNRRAKFRKQERHAI 175
>gi|380021433|ref|XP_003694570.1| PREDICTED: uncharacterized protein LOC100865467 [Apis florea]
Length = 386
Score = 39.3 bits (90), Expect = 0.26, Method: Composition-based stats.
Identities = 15/18 (83%), Positives = 17/18 (94%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRK ER
Sbjct: 95 RVQVWFQNRRAKWRKSER 112
>gi|195157866|ref|XP_002019815.1| GL12006 [Drosophila persimilis]
gi|194116406|gb|EDW38449.1| GL12006 [Drosophila persimilis]
Length = 618
Score = 39.3 bits (90), Expect = 0.26, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 36/86 (41%), Gaps = 13/86 (15%)
Query: 10 RVRVWFKNRRAKWRK----RERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPDTDSLYTSA 65
RV+VWF+NRRAKWRK R+ + + + + F QT T +
Sbjct: 345 RVQVWFQNRRAKWRKHEPPRKTGYIKTSTPPTATLNSSLAPPFTSYPQTTTVTPPGSMDS 404
Query: 66 YSSYN---------NWASKVPSPLGT 82
++SY + S SP GT
Sbjct: 405 WTSYQTPYELTPQFSLLSPAASPYGT 430
>gi|195122770|ref|XP_002005884.1| GI20720 [Drosophila mojavensis]
gi|193910952|gb|EDW09819.1| GI20720 [Drosophila mojavensis]
Length = 216
Score = 39.3 bits (90), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 15/21 (71%), Positives = 21/21 (100%)
Query: 10 RVRVWFKNRRAKWRKRERNAM 30
RV+VWF+NRRAK+RK+ER+A+
Sbjct: 153 RVQVWFQNRRAKFRKQERHAV 173
>gi|194885740|ref|XP_001976486.1| GG19984 [Drosophila erecta]
gi|190659673|gb|EDV56886.1| GG19984 [Drosophila erecta]
Length = 219
Score = 39.3 bits (90), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 15/21 (71%), Positives = 21/21 (100%)
Query: 10 RVRVWFKNRRAKWRKRERNAM 30
RV+VWF+NRRAK+RK+ER+A+
Sbjct: 154 RVQVWFQNRRAKFRKQERHAI 174
>gi|72046825|ref|XP_781184.1| PREDICTED: visual system homeobox 2-like [Strongylocentrotus
purpuratus]
Length = 450
Score = 39.3 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 13/18 (72%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
R++VWF+NRRAKWRK+E+
Sbjct: 218 RIQVWFQNRRAKWRKKEK 235
>gi|195489357|ref|XP_002092703.1| GE11517 [Drosophila yakuba]
gi|194178804|gb|EDW92415.1| GE11517 [Drosophila yakuba]
Length = 219
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 15/21 (71%), Positives = 21/21 (100%)
Query: 10 RVRVWFKNRRAKWRKRERNAM 30
RV+VWF+NRRAK+RK+ER+A+
Sbjct: 154 RVQVWFQNRRAKFRKQERHAI 174
>gi|444707558|gb|ELW48823.1| Homeobox protein aristaless-like 4 [Tupaia chinensis]
Length = 550
Score = 39.3 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 15/16 (93%), Positives = 16/16 (100%)
Query: 12 RVWFKNRRAKWRKRER 27
RVWF+NRRAKWRKRER
Sbjct: 348 RVWFQNRRAKWRKRER 363
>gi|431839120|gb|ELK01047.1| Visual system homeobox 2 [Pteropus alecto]
Length = 467
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 14/18 (77%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
R++VWF+NRRAKWRKRE+
Sbjct: 297 RIQVWFQNRRAKWRKREK 314
>gi|397498077|ref|XP_003819820.1| PREDICTED: uncharacterized protein LOC100992087 [Pan paniscus]
Length = 591
Score = 39.3 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 19/31 (61%), Positives = 23/31 (74%), Gaps = 5/31 (16%)
Query: 1 MGELMALWL-----RVRVWFKNRRAKWRKRE 26
M E +AL L RV+VWF+NRRAKWRK+E
Sbjct: 146 MREALALRLDLVESRVQVWFQNRRAKWRKKE 176
>gi|242009008|ref|XP_002425285.1| homeobox protein arx, putative [Pediculus humanus corporis]
gi|212509050|gb|EEB12547.1| homeobox protein arx, putative [Pediculus humanus corporis]
Length = 513
Score = 39.3 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 15/18 (83%), Positives = 17/18 (94%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRK ER
Sbjct: 93 RVQVWFQNRRAKWRKAER 110
>gi|125807005|ref|XP_001360225.1| GA10822 [Drosophila pseudoobscura pseudoobscura]
gi|195149359|ref|XP_002015625.1| GL10922 [Drosophila persimilis]
gi|54635396|gb|EAL24799.1| GA10822 [Drosophila pseudoobscura pseudoobscura]
gi|194109472|gb|EDW31515.1| GL10922 [Drosophila persimilis]
Length = 216
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 15/21 (71%), Positives = 21/21 (100%)
Query: 10 RVRVWFKNRRAKWRKRERNAM 30
RV+VWF+NRRAK+RK+ER+A+
Sbjct: 153 RVQVWFQNRRAKFRKQERHAI 173
>gi|149639705|ref|XP_001515180.1| PREDICTED: homeobox protein Hox-D1-like [Ornithorhynchus anatinus]
Length = 263
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 23/36 (63%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFS 45
+V++WF+NRR K +KRER A+A +A F S
Sbjct: 207 QVKIWFQNRRMKQKKREREGQLASAPSAASFPTPLS 242
>gi|72044362|ref|XP_782307.1| PREDICTED: uncharacterized protein LOC576952 [Strongylocentrotus
purpuratus]
Length = 528
Score = 39.3 bits (90), Expect = 0.28, Method: Composition-based stats.
Identities = 13/19 (68%), Positives = 19/19 (100%)
Query: 9 LRVRVWFKNRRAKWRKRER 27
+RV+VWF+NRRAKWR++E+
Sbjct: 309 VRVQVWFQNRRAKWRRQEK 327
>gi|348520662|ref|XP_003447846.1| PREDICTED: visual system homeobox 2-like [Oreochromis niloticus]
Length = 259
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 14/18 (77%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
R++VWF+NRRAKWRKRE+
Sbjct: 92 RIQVWFQNRRAKWRKREK 109
>gi|345327987|ref|XP_001508209.2| PREDICTED: dorsal root ganglia homeobox protein-like, partial
[Ornithorhynchus anatinus]
Length = 173
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 16/22 (72%), Positives = 19/22 (86%)
Query: 10 RVRVWFKNRRAKWRKRERNAMN 31
RV+VWF+NRRAKWRK ER A +
Sbjct: 76 RVQVWFQNRRAKWRKTERGASD 97
>gi|291229234|ref|XP_002734580.1| PREDICTED: retinal homeobox protein-like protein-like [Saccoglossus
kowalevskii]
Length = 279
Score = 39.3 bits (90), Expect = 0.28, Method: Composition-based stats.
Identities = 14/19 (73%), Positives = 19/19 (100%)
Query: 10 RVRVWFKNRRAKWRKRERN 28
RV+VWF+NRRAKWRK+E++
Sbjct: 155 RVQVWFQNRRAKWRKKEQH 173
>gi|198426751|ref|XP_002125687.1| PREDICTED: transcription factor protein [Ciona intestinalis]
Length = 520
Score = 39.3 bits (90), Expect = 0.28, Method: Composition-based stats.
Identities = 14/17 (82%), Positives = 17/17 (100%)
Query: 10 RVRVWFKNRRAKWRKRE 26
R++VWF+NRRAKWRKRE
Sbjct: 432 RIQVWFQNRRAKWRKRE 448
>gi|7595811|gb|AAF64460.1|AF241310_1 transcription factor PaxB [Acropora millepora]
Length = 571
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 16/29 (55%), Positives = 23/29 (79%), Gaps = 1/29 (3%)
Query: 10 RVRVWFKNRRAKWRKRER-NAMNAAAAAA 37
R++VWF NRRAKWRK+E+ +N+ AA+
Sbjct: 274 RIQVWFSNRRAKWRKQEKVPPLNSPTAAS 302
>gi|372266156|ref|NP_001243201.1| visual system homeobox 1 isoform d [Homo sapiens]
gi|112820194|gb|ABI23978.1| visual system homeobox 1 transcript variant 6 [Homo sapiens]
Length = 301
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 14/18 (77%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
R++VWF+NRRAKWRKRE+
Sbjct: 207 RIQVWFQNRRAKWRKREK 224
>gi|312071081|ref|XP_003138443.1| hypothetical protein LOAG_02858 [Loa loa]
gi|307766387|gb|EFO25621.1| hypothetical protein LOAG_02858 [Loa loa]
Length = 151
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 35/58 (60%), Gaps = 5/58 (8%)
Query: 9 LRVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPDTDSLYTSAY 66
+R+++WFKNRRAK+RK+ RN N ++ + +FN ++ P+ ++ +++
Sbjct: 83 MRIQIWFKNRRAKYRKKLRNTANPEITSST-----YVPKFNAVITWKPNVAFVFVTSF 135
>gi|189303835|gb|ACD85821.1| paired-like homeobox Prd1 [Mnemiopsis leidyi]
Length = 358
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 14/18 (77%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRKR++
Sbjct: 225 RVQVWFQNRRAKWRKRQK 242
>gi|449506969|ref|XP_002192247.2| PREDICTED: motor neuron and pancreas homeobox protein 1-like
[Taeniopygia guttata]
Length = 161
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Query: 4 LMALWLRVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPDTDSLYT 63
LM +V++WF+NRR KW KR R A A + + G S L+ + P + +
Sbjct: 53 LMLTETQVKIWFQNRRMKW-KRSRKAKEQGAQMEAEKQRGLSKTCEKLLPSEPQGQAAES 111
Query: 64 SAYSSYN 70
+ ++
Sbjct: 112 PEFMGHS 118
>gi|426391201|ref|XP_004061969.1| PREDICTED: visual system homeobox 1 isoform 2 [Gorilla gorilla
gorilla]
Length = 301
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 14/18 (77%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
R++VWF+NRRAKWRKRE+
Sbjct: 207 RIQVWFQNRRAKWRKREK 224
>gi|319740964|gb|ADV69001.1| retinal homeobox [Patiria miniata]
Length = 314
Score = 39.3 bits (90), Expect = 0.30, Method: Composition-based stats.
Identities = 14/24 (58%), Positives = 21/24 (87%)
Query: 9 LRVRVWFKNRRAKWRKRERNAMNA 32
+RV+VWF+NRRAKWR++E+ +A
Sbjct: 257 VRVQVWFQNRRAKWRRQEKMESSA 280
>gi|339252892|ref|XP_003371669.1| ALX homeobox protein 1 [Trichinella spiralis]
gi|316968043|gb|EFV52386.1| ALX homeobox protein 1 [Trichinella spiralis]
Length = 325
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 23/31 (74%), Gaps = 5/31 (16%)
Query: 1 MGELMALWL-----RVRVWFKNRRAKWRKRE 26
M E +AL L RV+VWF+NRRAKWRK+E
Sbjct: 151 MREALALRLDLVESRVQVWFQNRRAKWRKKE 181
>gi|47220084|emb|CAG12232.1| unnamed protein product [Tetraodon nigroviridis]
Length = 229
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 23/31 (74%), Gaps = 5/31 (16%)
Query: 1 MGELMALWL-----RVRVWFKNRRAKWRKRE 26
M E +AL L RV+VWF+NRRAKWRK+E
Sbjct: 128 MREALALRLDLIESRVQVWFQNRRAKWRKKE 158
>gi|47218913|emb|CAF98111.1| unnamed protein product [Tetraodon nigroviridis]
Length = 204
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 23/31 (74%), Gaps = 5/31 (16%)
Query: 1 MGELMALWL-----RVRVWFKNRRAKWRKRE 26
M E +AL L RV+VWF+NRRAKWRK+E
Sbjct: 102 MREALALRLDLVESRVQVWFQNRRAKWRKKE 132
>gi|327282538|ref|XP_003225999.1| PREDICTED: retinal homeobox protein Rx-B-like [Anolis carolinensis]
Length = 495
Score = 39.3 bits (90), Expect = 0.30, Method: Composition-based stats.
Identities = 13/19 (68%), Positives = 19/19 (100%)
Query: 9 LRVRVWFKNRRAKWRKRER 27
+RV+VWF+NRRAKWR++E+
Sbjct: 342 VRVQVWFQNRRAKWRRQEK 360
>gi|410898347|ref|XP_003962659.1| PREDICTED: visual system homeobox 2-like [Takifugu rubripes]
Length = 396
Score = 39.3 bits (90), Expect = 0.30, Method: Composition-based stats.
Identities = 13/18 (72%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
R++VWF+NRRAKWRK+E+
Sbjct: 209 RIQVWFQNRRAKWRKKEK 226
>gi|380805315|gb|AFE74533.1| homeobox protein ARX, partial [Macaca mulatta]
Length = 161
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 15/18 (83%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRKRE+
Sbjct: 97 RVQVWFQNRRAKWRKREK 114
>gi|195585235|ref|XP_002082395.1| GD11547 [Drosophila simulans]
gi|194194404|gb|EDX07980.1| GD11547 [Drosophila simulans]
Length = 903
Score = 39.3 bits (90), Expect = 0.30, Method: Composition-based stats.
Identities = 13/20 (65%), Positives = 20/20 (100%)
Query: 9 LRVRVWFKNRRAKWRKRERN 28
+RV+VWF+NRRAKWR++E++
Sbjct: 600 VRVQVWFQNRRAKWRRQEKS 619
>gi|195119474|ref|XP_002004256.1| GI19710 [Drosophila mojavensis]
gi|193909324|gb|EDW08191.1| GI19710 [Drosophila mojavensis]
Length = 884
Score = 39.3 bits (90), Expect = 0.30, Method: Composition-based stats.
Identities = 13/20 (65%), Positives = 20/20 (100%)
Query: 9 LRVRVWFKNRRAKWRKRERN 28
+RV+VWF+NRRAKWR++E++
Sbjct: 595 VRVQVWFQNRRAKWRRQEKS 614
>gi|297289565|ref|XP_002803549.1| PREDICTED: homeobox protein NOBOX-like [Macaca mulatta]
Length = 574
Score = 39.3 bits (90), Expect = 0.30, Method: Composition-based stats.
Identities = 18/30 (60%), Positives = 21/30 (70%), Gaps = 5/30 (16%)
Query: 10 RVRVWFKNRRAKWRKRER-----NAMNAAA 34
R+ VWF+NRRAKWRK E+ N NAAA
Sbjct: 230 RIMVWFQNRRAKWRKMEKLNGKENKDNAAA 259
>gi|194881725|ref|XP_001974972.1| GG22067 [Drosophila erecta]
gi|190658159|gb|EDV55372.1| GG22067 [Drosophila erecta]
Length = 898
Score = 39.3 bits (90), Expect = 0.30, Method: Composition-based stats.
Identities = 13/20 (65%), Positives = 20/20 (100%)
Query: 9 LRVRVWFKNRRAKWRKRERN 28
+RV+VWF+NRRAKWR++E++
Sbjct: 595 VRVQVWFQNRRAKWRRQEKS 614
>gi|57770400|ref|NP_001009885.1| motor neuron and pancreas homeobox protein 1 [Danio rerio]
gi|41400300|gb|AAS07018.1| homeodomain protein Hb9 [Danio rerio]
gi|62205408|gb|AAH93243.1| Motor neuron and pancreas homeobox 1 [Danio rerio]
Length = 311
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 30/57 (52%)
Query: 4 LMALWLRVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPDTDS 60
LM +V++WF+NRR KW++ ++ AA A G + +GL + + DS
Sbjct: 214 LMLTETQVKIWFQNRRMKWKRSKKAKEQAAQDAEKQKGKGNHDKMDGLEKDYQKVDS 270
>gi|348568378|ref|XP_003469975.1| PREDICTED: homeobox protein unc-4 homolog [Cavia porcellus]
Length = 619
Score = 39.3 bits (90), Expect = 0.31, Method: Composition-based stats.
Identities = 19/31 (61%), Positives = 23/31 (74%), Gaps = 5/31 (16%)
Query: 1 MGELMALWL-----RVRVWFKNRRAKWRKRE 26
M E +AL L RV+VWF+NRRAKWRK+E
Sbjct: 217 MREALALRLDLVESRVQVWFQNRRAKWRKKE 247
>gi|313575607|gb|ADR66840.1| Vsx2 transcription factor [Tinca tinca]
Length = 217
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 14/18 (77%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
R++VWF+NRRAKWRKRE+
Sbjct: 110 RIQVWFQNRRAKWRKREK 127
>gi|21536236|ref|NP_570939.1| homeobox protein NOBOX [Mus musculus]
gi|81916050|sp|Q8VIH1.1|NOBOX_MOUSE RecName: Full=Homeobox protein NOBOX; AltName:
Full=Homeodomain-containing protein OG-2; AltName:
Full=Newborn ovary homeobox protein; AltName:
Full=Oocyte-specific homeobox protein
gi|16923259|gb|AAL29683.1| newborn ovary homeodomain protein [Mus musculus]
gi|116138218|gb|AAI25281.1| NOBOX oogenesis homeobox [Mus musculus]
gi|116138220|gb|AAI25283.1| NOBOX oogenesis homeobox [Mus musculus]
gi|148681500|gb|EDL13447.1| NOBOX oogenesis homeobox [Mus musculus]
Length = 527
Score = 39.3 bits (90), Expect = 0.31, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 21/34 (61%), Gaps = 4/34 (11%)
Query: 10 RVRVWFKNRRAKWRK----RERNAMNAAAAAAVD 39
R+ VWF+NRRAKWRK E+ N AA + D
Sbjct: 179 RIMVWFQNRRAKWRKVEKLNEKETKNGPAAPSAD 212
>gi|195153960|ref|XP_002017891.1| GL17060 [Drosophila persimilis]
gi|194113687|gb|EDW35730.1| GL17060 [Drosophila persimilis]
Length = 920
Score = 39.3 bits (90), Expect = 0.31, Method: Composition-based stats.
Identities = 13/20 (65%), Positives = 20/20 (100%)
Query: 9 LRVRVWFKNRRAKWRKRERN 28
+RV+VWF+NRRAKWR++E++
Sbjct: 602 VRVQVWFQNRRAKWRRQEKS 621
>gi|194766533|ref|XP_001965379.1| GF20646 [Drosophila ananassae]
gi|190617989|gb|EDV33513.1| GF20646 [Drosophila ananassae]
Length = 405
Score = 39.3 bits (90), Expect = 0.31, Method: Composition-based stats.
Identities = 13/18 (72%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
R++VWF+NRRAKWRK+E+
Sbjct: 125 RIQVWFQNRRAKWRKQEK 142
>gi|424034|pir||A46403 transcription factor with prd-type homeo domain and Pro/ Gln-rich
domain al - fruit fly (Drosophila melanogaster)
Length = 384
Score = 39.3 bits (90), Expect = 0.31, Method: Composition-based stats.
Identities = 13/18 (72%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
R++VWF+NRRAKWRK+E+
Sbjct: 128 RIQVWFQNRRAKWRKQEK 145
>gi|432112496|gb|ELK35234.1| Dorsal root ganglia homeobox protein [Myotis davidii]
Length = 180
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 17/27 (62%), Positives = 20/27 (74%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAA 36
RV+VWF+NRRAKWRK ER A + A
Sbjct: 118 RVQVWFQNRRAKWRKTERGASDQEPGA 144
>gi|307206696|gb|EFN84651.1| Homeobox protein goosecoid [Harpegnathos saltator]
Length = 351
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 23/34 (67%), Gaps = 5/34 (14%)
Query: 3 ELMALWL-----RVRVWFKNRRAKWRKRERNAMN 31
E +AL + R+ VWFKNRRAKWRK++R +
Sbjct: 268 EQLALQVDLKEERIEVWFKNRRAKWRKQKREEQD 301
>gi|195346236|ref|XP_002039672.1| GM15784 [Drosophila sechellia]
gi|194135021|gb|EDW56537.1| GM15784 [Drosophila sechellia]
Length = 895
Score = 39.3 bits (90), Expect = 0.32, Method: Composition-based stats.
Identities = 13/20 (65%), Positives = 20/20 (100%)
Query: 9 LRVRVWFKNRRAKWRKRERN 28
+RV+VWF+NRRAKWR++E++
Sbjct: 592 VRVQVWFQNRRAKWRRQEKS 611
>gi|405959975|gb|EKC25942.1| Homeobox protein unc-4-like protein [Crassostrea gigas]
Length = 392
Score = 39.3 bits (90), Expect = 0.32, Method: Composition-based stats.
Identities = 19/31 (61%), Positives = 23/31 (74%), Gaps = 5/31 (16%)
Query: 1 MGELMALWL-----RVRVWFKNRRAKWRKRE 26
M E +AL L RV+VWF+NRRAKWRK+E
Sbjct: 132 MREALALRLDLVESRVQVWFQNRRAKWRKKE 162
>gi|403306599|ref|XP_003943814.1| PREDICTED: uncharacterized protein LOC101038211 [Saimiri
boliviensis boliviensis]
Length = 811
Score = 39.3 bits (90), Expect = 0.32, Method: Composition-based stats.
Identities = 19/31 (61%), Positives = 23/31 (74%), Gaps = 5/31 (16%)
Query: 1 MGELMALWL-----RVRVWFKNRRAKWRKRE 26
M E +AL L RV+VWF+NRRAKWRK+E
Sbjct: 188 MREALALRLDLVESRVQVWFQNRRAKWRKKE 218
>gi|380011252|ref|XP_003689724.1| PREDICTED: homeobox protein goosecoid isoform A-like [Apis florea]
Length = 329
Score = 39.3 bits (90), Expect = 0.32, Method: Composition-based stats.
Identities = 14/18 (77%), Positives = 17/18 (94%)
Query: 10 RVRVWFKNRRAKWRKRER 27
R+ VWFKNRRAKWRK++R
Sbjct: 257 RIEVWFKNRRAKWRKQKR 274
>gi|195382485|ref|XP_002049960.1| GJ20457 [Drosophila virilis]
gi|194144757|gb|EDW61153.1| GJ20457 [Drosophila virilis]
Length = 216
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 23/29 (79%)
Query: 2 GELMALWLRVRVWFKNRRAKWRKRERNAM 30
+L RV+VWF+NRRAK+RK+ER+A+
Sbjct: 145 SKLHLTEARVQVWFQNRRAKFRKQERHAV 173
>gi|110757324|ref|XP_001121922.1| PREDICTED: homeobox protein goosecoid isoform B [Apis mellifera]
Length = 328
Score = 39.3 bits (90), Expect = 0.32, Method: Composition-based stats.
Identities = 14/18 (77%), Positives = 17/18 (94%)
Query: 10 RVRVWFKNRRAKWRKRER 27
R+ VWFKNRRAKWRK++R
Sbjct: 257 RIEVWFKNRRAKWRKQKR 274
>gi|27126071|dbj|BAC44990.1| Pit-1 [Gallus gallus]
Length = 142
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 24/35 (68%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGF 44
R++VWF+NRRAK RK+ER+ + A + +GF
Sbjct: 30 RIQVWFQNRRAKQRKQERSLLQPTAHLSPATFSGF 64
>gi|410977842|ref|XP_003995309.1| PREDICTED: retinal homeobox protein Rx [Felis catus]
Length = 390
Score = 39.3 bits (90), Expect = 0.32, Method: Composition-based stats.
Identities = 13/19 (68%), Positives = 19/19 (100%)
Query: 9 LRVRVWFKNRRAKWRKRER 27
+RV+VWF+NRRAKWR++E+
Sbjct: 178 VRVQVWFQNRRAKWRRQEK 196
>gi|410923991|ref|XP_003975465.1| PREDICTED: LOW QUALITY PROTEIN: retinal homeobox protein Rx2-like
[Takifugu rubripes]
Length = 358
Score = 39.3 bits (90), Expect = 0.32, Method: Composition-based stats.
Identities = 13/19 (68%), Positives = 19/19 (100%)
Query: 9 LRVRVWFKNRRAKWRKRER 27
+RV+VWF+NRRAKWR++E+
Sbjct: 210 VRVQVWFQNRRAKWRRQEK 228
>gi|18859337|ref|NP_571301.1| retinal homeobox protein Rx2 [Danio rerio]
gi|18202035|sp|O42357.1|RX2_DANRE RecName: Full=Retinal homeobox protein Rx2
gi|2240028|gb|AAB62326.1| retinal homeobox protein [Danio rerio]
Length = 327
Score = 39.3 bits (90), Expect = 0.32, Method: Composition-based stats.
Identities = 13/19 (68%), Positives = 19/19 (100%)
Query: 9 LRVRVWFKNRRAKWRKRER 27
+RV+VWF+NRRAKWR++E+
Sbjct: 177 VRVQVWFQNRRAKWRRQEK 195
>gi|449476334|ref|XP_002191285.2| PREDICTED: homeobox protein unc-4 homolog [Taeniopygia guttata]
Length = 381
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 23/31 (74%), Gaps = 5/31 (16%)
Query: 1 MGELMALWL-----RVRVWFKNRRAKWRKRE 26
M E +AL L RV+VWF+NRRAKWRK+E
Sbjct: 73 MREALALRLDLVESRVQVWFQNRRAKWRKKE 103
>gi|72084142|ref|XP_791442.1| PREDICTED: aristaless homeobox protein [Strongylocentrotus
purpuratus]
Length = 505
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 15/18 (83%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRKRE+
Sbjct: 255 RVQVWFQNRRAKWRKREK 272
>gi|393907907|gb|EJD74822.1| hypothetical protein LOAG_17921 [Loa loa]
Length = 286
Score = 39.3 bits (90), Expect = 0.33, Method: Composition-based stats.
Identities = 19/32 (59%), Positives = 24/32 (75%), Gaps = 5/32 (15%)
Query: 1 MGELMALWL-----RVRVWFKNRRAKWRKRER 27
M E +AL L RV+VWF+NRRAKWRK+E+
Sbjct: 128 MREALALRLDLLESRVQVWFQNRRAKWRKKEQ 159
>gi|344250771|gb|EGW06875.1| Visual system homeobox 1 [Cricetulus griseus]
Length = 226
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 29/59 (49%), Gaps = 6/59 (10%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPDTDSLYTSAYSS 68
R++VWF+NRRAKWRKRE+ ++ A + P DSL SA S
Sbjct: 67 RIQVWFQNRRAKWRKREKRWGGSSVMAEYGLYGAM------VRHCIPLPDSLLNSAADS 119
>gi|198458256|ref|XP_001360971.2| GA10035 [Drosophila pseudoobscura pseudoobscura]
gi|198136277|gb|EAL25547.2| GA10035 [Drosophila pseudoobscura pseudoobscura]
Length = 921
Score = 39.3 bits (90), Expect = 0.33, Method: Composition-based stats.
Identities = 13/20 (65%), Positives = 20/20 (100%)
Query: 9 LRVRVWFKNRRAKWRKRERN 28
+RV+VWF+NRRAKWR++E++
Sbjct: 603 VRVQVWFQNRRAKWRRQEKS 622
>gi|327276026|ref|XP_003222772.1| PREDICTED: paired box protein Pax-6-like [Anolis carolinensis]
Length = 278
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 34/78 (43%), Gaps = 8/78 (10%)
Query: 10 RVRVWFKNRRAKWRKRE--RNAMNAAAAAA------VDFKNGFSTQFNGLMQTFPDTDSL 61
R++VWF NRRAKWR+ E RN A F G ST + L Q L
Sbjct: 117 RIQVWFSNRRAKWRREEKLRNQRRQAGGTGGHLTINSSFGTGGSTVYQSLPQPTGSGTML 176
Query: 62 YTSAYSSYNNWASKVPSP 79
+ + NN+ + P P
Sbjct: 177 GRTESALSNNYGALPPLP 194
>gi|363735465|ref|XP_001234656.2| PREDICTED: dorsal root ganglia homeobox protein [Gallus gallus]
Length = 260
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 15/22 (68%), Positives = 19/22 (86%)
Query: 10 RVRVWFKNRRAKWRKRERNAMN 31
RV+VWF+NRRAKWRK ER + +
Sbjct: 76 RVQVWFQNRRAKWRKTERGSSD 97
>gi|390361068|ref|XP_003729834.1| PREDICTED: dorsal root ganglia homeobox protein-like
[Strongylocentrotus purpuratus]
Length = 347
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 22/33 (66%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKN 42
RV+VWF+NRRAKWRK ER + ++ +N
Sbjct: 97 RVQVWFQNRRAKWRKAERTKQDRGPSSTSSPEN 129
>gi|27807225|ref|NP_777103.1| homeobox protein prophet of Pit-1 [Bos taurus]
gi|42559484|sp|Q8MJI9.1|PROP1_BOVIN RecName: Full=Homeobox protein prophet of Pit-1; Short=PROP-1;
AltName: Full=Pituitary-specific homeodomain factor
gi|20502813|gb|AAM22640.1|AF453511_1 prophet of Pit-1 [Bos taurus]
Length = 226
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 43/97 (44%), Gaps = 21/97 (21%)
Query: 10 RVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQ---------------------F 48
R++VWF+NRRAK RK+ER+ + A + +GF + +
Sbjct: 112 RIQVWFQNRRAKQRKQERSLLQPLAHLSPATFSGFLPEPPSCPYSYPTPPPPMTCFPHPY 171
Query: 49 NGLMQTFPDTDSLYTSAYSSYNNWASKVPSPLGTIGV 85
N + + P T S + Y S + + + P+P G +
Sbjct: 172 NRALPSQPSTGSSFARPYQSEDWYPNLHPTPAGHLAC 208
>gi|195456001|ref|XP_002074959.1| GK23335 [Drosophila willistoni]
gi|194171044|gb|EDW85945.1| GK23335 [Drosophila willistoni]
Length = 937
Score = 39.3 bits (90), Expect = 0.33, Method: Composition-based stats.
Identities = 13/20 (65%), Positives = 20/20 (100%)
Query: 9 LRVRVWFKNRRAKWRKRERN 28
+RV+VWF+NRRAKWR++E++
Sbjct: 637 VRVQVWFQNRRAKWRRQEKS 656
>gi|195029469|ref|XP_001987595.1| GH22006 [Drosophila grimshawi]
gi|193903595|gb|EDW02462.1| GH22006 [Drosophila grimshawi]
Length = 879
Score = 39.3 bits (90), Expect = 0.33, Method: Composition-based stats.
Identities = 13/20 (65%), Positives = 20/20 (100%)
Query: 9 LRVRVWFKNRRAKWRKRERN 28
+RV+VWF+NRRAKWR++E++
Sbjct: 586 VRVQVWFQNRRAKWRRQEKS 605
>gi|158292555|ref|XP_313972.3| AGAP005096-PA [Anopheles gambiae str. PEST]
gi|157017047|gb|EAA09363.3| AGAP005096-PA [Anopheles gambiae str. PEST]
Length = 898
Score = 39.3 bits (90), Expect = 0.33, Method: Composition-based stats.
Identities = 13/20 (65%), Positives = 20/20 (100%)
Query: 9 LRVRVWFKNRRAKWRKRERN 28
+RV+VWF+NRRAKWR++E++
Sbjct: 591 VRVQVWFQNRRAKWRRQEKS 610
>gi|51094691|gb|EAL23940.1| similar to Unc4.1 homeobox [Homo sapiens]
Length = 344
Score = 39.3 bits (90), Expect = 0.33, Method: Composition-based stats.
Identities = 14/17 (82%), Positives = 17/17 (100%)
Query: 10 RVRVWFKNRRAKWRKRE 26
RV+VWF+NRRAKWRK+E
Sbjct: 281 RVQVWFQNRRAKWRKKE 297
>gi|195118282|ref|XP_002003669.1| GI21624 [Drosophila mojavensis]
gi|193914244|gb|EDW13111.1| GI21624 [Drosophila mojavensis]
Length = 397
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 13/18 (72%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
R++VWF+NRRAKWRK+E+
Sbjct: 115 RIQVWFQNRRAKWRKQEK 132
>gi|50952828|gb|AAT90340.1| homeodomain protein 9, partial [Danio rerio]
Length = 294
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 30/57 (52%)
Query: 4 LMALWLRVRVWFKNRRAKWRKRERNAMNAAAAAAVDFKNGFSTQFNGLMQTFPDTDS 60
LM +V++WF+NRR KW++ ++ AA A G + +GL + + DS
Sbjct: 214 LMLTETQVKIWFQNRRMKWKRSKKAKEQAAQDAEKQRGKGNHDKMDGLEKDYQKVDS 270
>gi|28573580|ref|NP_726006.2| retinal homeobox [Drosophila melanogaster]
gi|17380504|sp|Q9W2Q1.2|RX_DROME RecName: Full=Retinal homeobox protein Rx; Short=DRx; Short=DRx1
gi|21392130|gb|AAM48419.1| RE39020p [Drosophila melanogaster]
gi|28380638|gb|AAF46639.3| retinal homeobox [Drosophila melanogaster]
gi|220960168|gb|ACL92620.1| Rx-PA [synthetic construct]
Length = 873
Score = 39.3 bits (90), Expect = 0.34, Method: Composition-based stats.
Identities = 13/20 (65%), Positives = 20/20 (100%)
Query: 9 LRVRVWFKNRRAKWRKRERN 28
+RV+VWF+NRRAKWR++E++
Sbjct: 570 VRVQVWFQNRRAKWRRQEKS 589
>gi|195148028|ref|XP_002014976.1| GL18665 [Drosophila persimilis]
gi|194106929|gb|EDW28972.1| GL18665 [Drosophila persimilis]
Length = 370
Score = 39.3 bits (90), Expect = 0.34, Method: Composition-based stats.
Identities = 15/18 (83%), Positives = 17/18 (94%)
Query: 10 RVRVWFKNRRAKWRKRER 27
RV+VWF+NRRAKWRK ER
Sbjct: 95 RVQVWFQNRRAKWRKAER 112
>gi|425918641|gb|AFY12009.1| goosecoid [Priapulus caudatus]
Length = 260
Score = 38.9 bits (89), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 15/19 (78%), Positives = 17/19 (89%)
Query: 10 RVRVWFKNRRAKWRKRERN 28
RV VWFKNRRAKWRK++R
Sbjct: 153 RVEVWFKNRRAKWRKQKRE 171
>gi|290262|gb|AAA28840.1| prd-like homeobox protein [Drosophila melanogaster]
Length = 408
Score = 38.9 bits (89), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 13/18 (72%), Positives = 18/18 (100%)
Query: 10 RVRVWFKNRRAKWRKRER 27
R++VWF+NRRAKWRK+E+
Sbjct: 128 RIQVWFQNRRAKWRKQEK 145
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.129 0.408
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,523,397,800
Number of Sequences: 23463169
Number of extensions: 52179115
Number of successful extensions: 151850
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 2581
Number of HSP's successfully gapped in prelim test: 300
Number of HSP's that attempted gapping in prelim test: 148750
Number of HSP's gapped (non-prelim): 2915
length of query: 92
length of database: 8,064,228,071
effective HSP length: 62
effective length of query: 30
effective length of database: 6,609,511,593
effective search space: 198285347790
effective search space used: 198285347790
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 69 (31.2 bits)