BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy15890
(126 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|189234679|ref|XP_970167.2| PREDICTED: similar to pituitary homeobox1 [Tribolium castaneum]
Length = 517
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/116 (41%), Positives = 65/116 (56%), Gaps = 28/116 (24%)
Query: 1 MLPTGMTAPLTGSASPAGRRSALLMCLWVAELDGSVAAATCPYVPPTTPYSMYTHRPASS 60
MLP GM++ LT + + +VA CPY P PYSMY HR A++
Sbjct: 316 MLPGGMSSGLTSTPT-------------------AVAPQPCPYTTPANPYSMYHHR-AAT 355
Query: 61 DPSLSRVAECNVMSSSIASLRLKAKQHSNF-NYTSITPPVSSANNRAACQYSDESV 115
+P C+ MSSSIASLRLKAKQH+ F Y+S++P SS+ +ACQY+ +
Sbjct: 356 EP-------CSAMSSSIASLRLKAKQHTGFVGYSSVSPVRSSSAGLSACQYAGSGI 404
>gi|270002832|gb|EEZ99279.1| Ptx1 [Tribolium castaneum]
Length = 508
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/116 (41%), Positives = 65/116 (56%), Gaps = 28/116 (24%)
Query: 1 MLPTGMTAPLTGSASPAGRRSALLMCLWVAELDGSVAAATCPYVPPTTPYSMYTHRPASS 60
MLP GM++ LT + + +VA CPY P PYSMY HR A++
Sbjct: 316 MLPGGMSSGLTSTPT-------------------AVAPQPCPYTTPANPYSMYHHR-AAT 355
Query: 61 DPSLSRVAECNVMSSSIASLRLKAKQHSNF-NYTSITPPVSSANNRAACQYSDESV 115
+P C+ MSSSIASLRLKAKQH+ F Y+S++P SS+ +ACQY+ +
Sbjct: 356 EP-------CSAMSSSIASLRLKAKQHTGFVGYSSVSPVRSSSAGLSACQYAGSGI 404
>gi|17380175|sp|Q9W751.1|PITX1_XENLA RecName: Full=Pituitary homeobox 1; AltName: Full=Homeobox protein
PITX1; Short=X-PITX-1; Short=xPitx1; AltName:
Full=Paired-like homeodomain transcription factor 1
gi|5566001|gb|AAD45292.1|AF155206_1 homeodomain transcription factor Pitx-1 [Xenopus laevis]
Length = 305
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 47/80 (58%), Gaps = 19/80 (23%)
Query: 32 LDGSVAAATCPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFN 91
L+ ++++ CPY PP +PY++Y CN SS+ASLRLK+KQHS F
Sbjct: 244 LNSAMSSTGCPYGPPGSPYTVYRD-------------TCN---SSLASLRLKSKQHSTFG 287
Query: 92 YTSITPPVSSANNRAACQYS 111
Y+S+ P SS N ACQY+
Sbjct: 288 YSSLQSPASSLN---ACQYN 304
>gi|148233752|ref|NP_001080981.1| pituitary homeobox 1 [Xenopus laevis]
gi|6851371|gb|AAF29531.1|AF217647_1 pituitary homeobox gene 1 paired-like homeodomain transcription
factor [Xenopus laevis]
gi|213624932|gb|AAI69446.1| Pituitary homeobox gene 1 paired-likehomeodomain transcription
factor [Xenopus laevis]
gi|213625070|gb|AAI69749.1| Pitx1 protein [Xenopus laevis]
gi|213626444|gb|AAI69444.1| Pituitary homeobox gene 1 paired-likehomeodomain transcription
factor [Xenopus laevis]
gi|213626626|gb|AAI69747.1| Pitx1 protein [Xenopus laevis]
Length = 305
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 47/80 (58%), Gaps = 19/80 (23%)
Query: 32 LDGSVAAATCPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFN 91
L+ ++++ CPY PP +PY++Y CN SS+ASLRLK+KQHS F
Sbjct: 244 LNSAMSSTGCPYGPPGSPYTVYRD-------------TCN---SSLASLRLKSKQHSTFG 287
Query: 92 YTSITPPVSSANNRAACQYS 111
Y+S+ P SS N ACQY+
Sbjct: 288 YSSLQSPASSLN---ACQYN 304
>gi|148539550|ref|NP_001091900.1| pituitary homeobox 1 [Xenopus laevis]
gi|10798738|emb|CAC12834.1| Pitx1 protein [Xenopus laevis]
Length = 305
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 47/80 (58%), Gaps = 19/80 (23%)
Query: 32 LDGSVAAATCPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFN 91
L+ ++++ CPY PP +PY++Y CN SS+ASLRLK+KQHS F
Sbjct: 244 LNSAMSSTGCPYGPPGSPYTVYRD-------------TCN---SSLASLRLKSKQHSTFG 287
Query: 92 YTSITPPVSSANNRAACQYS 111
Y+S+ P SS N ACQY+
Sbjct: 288 YSSLQSPASSLN---ACQYN 304
>gi|3236450|gb|AAC23684.1| paired-like homeodomain transcription factor Ptx1 [Gallus gallus]
Length = 302
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 61/112 (54%), Gaps = 25/112 (22%)
Query: 2 LPTGMTAPLTGSASPAGRRSAL--LMCLWVAELDGSVAAATCPYVPPTTPYSMYTHRPAS 59
+P+GM SA P S L + + + L+ ++++ CPY PP +PYS+Y
Sbjct: 213 MPSGMGH----SAVPGMANSGLNNINNISGSSLNSAMSSPACPYGPPGSPYSVYRD---- 264
Query: 60 SDPSLSRVAECNVMSSSIASLRLKAKQHSNFNYTSITPPVSSANNRAACQYS 111
CN SS+ASLRLK+KQHS+F Y+S+ P SS N ACQY+
Sbjct: 265 ---------TCN---SSLASLRLKSKQHSSFGYSSLQSPGSSLN---ACQYN 301
>gi|267844835|ref|NP_001161156.1| pituitary homeobox 1 [Gallus gallus]
gi|267844837|ref|NP_001161157.1| pituitary homeobox 1 [Gallus gallus]
gi|267844839|ref|NP_001161158.1| pituitary homeobox 1 [Gallus gallus]
Length = 302
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 61/112 (54%), Gaps = 25/112 (22%)
Query: 2 LPTGMTAPLTGSASPAGRRSAL--LMCLWVAELDGSVAAATCPYVPPTTPYSMYTHRPAS 59
+P+GM SA P S L + + + L+ ++++ CPY PP +PYS+Y
Sbjct: 213 MPSGMGH----SAVPGMANSGLNNINNISGSSLNSAMSSPACPYGPPGSPYSVYRD---- 264
Query: 60 SDPSLSRVAECNVMSSSIASLRLKAKQHSNFNYTSITPPVSSANNRAACQYS 111
CN SS+ASLRLK+KQHS+F Y+S+ P SS N ACQY+
Sbjct: 265 ---------TCN---SSLASLRLKSKQHSSFGYSSLQSPGSSLN---ACQYN 301
>gi|295798066|emb|CBL87030.1| ptx protein [Tribolium castaneum]
Length = 276
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 48/90 (53%), Gaps = 27/90 (30%)
Query: 1 MLPTGMTAPLTGSASPAGRRSALLMCLWVAELDGSVAAATCPYVPPTTPYSMYTHRPASS 60
MLP GM++ LT + + +VA CPY P PYSMY HR A++
Sbjct: 197 MLPGGMSSGLTSTPT-------------------AVAPQPCPYTTPANPYSMYHHR-AAT 236
Query: 61 DPSLSRVAECNVMSSSIASLRLKAKQHSNF 90
+P C+ MSSSIA LRLKAKQH+ F
Sbjct: 237 EP-------CSAMSSSIAPLRLKAKQHTGF 259
>gi|224068062|ref|XP_002187978.1| PREDICTED: pituitary homeobox 1 isoform 1 [Taeniopygia guttata]
gi|449475013|ref|XP_004175459.1| PREDICTED: pituitary homeobox 1 isoform 2 [Taeniopygia guttata]
Length = 302
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 48/80 (60%), Gaps = 19/80 (23%)
Query: 32 LDGSVAAATCPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFN 91
L+ ++++ CPY PP +PYS+Y CN SS+ASLRLK+KQHS+F
Sbjct: 241 LNSAMSSPACPYGPPGSPYSVYRD-------------TCN---SSLASLRLKSKQHSSFG 284
Query: 92 YTSITPPVSSANNRAACQYS 111
Y+S+ P SS N ACQY+
Sbjct: 285 YSSLQSPGSSLN---ACQYN 301
>gi|326928703|ref|XP_003210515.1| PREDICTED: pituitary homeobox 1-like [Meleagris gallopavo]
Length = 286
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 49/82 (59%), Gaps = 19/82 (23%)
Query: 30 AELDGSVAAATCPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSN 89
+ L+ ++++ CPY PP +PYS+Y CN SS+ASLRLK+KQHS+
Sbjct: 223 SSLNSAMSSPACPYGPPGSPYSVYRD-------------TCN---SSLASLRLKSKQHSS 266
Query: 90 FNYTSITPPVSSANNRAACQYS 111
F Y+S+ P SS N ACQY+
Sbjct: 267 FGYSSLQSPGSSLN---ACQYN 285
>gi|342837528|dbj|BAK57345.1| pituitary homeobox 2 [Scyliorhinus torazame]
Length = 338
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 45/76 (59%), Gaps = 20/76 (26%)
Query: 36 VAAATCPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFNYTSI 95
V +ATCPY PPT PY +R CN SS+ASLRLKAKQHS+F Y S+
Sbjct: 278 VPSATCPYAPPTPPY---VYRDT-----------CN---SSLASLRLKAKQHSSFGYASV 320
Query: 96 TPPVSSANNRAACQYS 111
P A+N +ACQY+
Sbjct: 321 QNP---ASNLSACQYA 333
>gi|149598484|ref|XP_001515509.1| PREDICTED: pituitary homeobox 1-like [Ornithorhynchus anatinus]
Length = 231
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 47/80 (58%), Gaps = 19/80 (23%)
Query: 32 LDGSVAAATCPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFN 91
L+ ++++ CPY PP +PYS+Y CN SS+ASLRLK+KQHS+F
Sbjct: 170 LNSAMSSPACPYGPPGSPYSVYRD-------------TCN---SSLASLRLKSKQHSSFG 213
Query: 92 YTSITPPVSSANNRAACQYS 111
Y+S+ P S N ACQY+
Sbjct: 214 YSSLQSPGSGLN---ACQYN 230
>gi|55926080|ref|NP_001007500.1| paired-like homeodomain 1 [Xenopus (Silurana) tropicalis]
gi|51258792|gb|AAH79936.1| paired-like homeodomain 1 [Xenopus (Silurana) tropicalis]
Length = 305
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 41/71 (57%), Gaps = 19/71 (26%)
Query: 41 CPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFNYTSITPPVS 100
CPY PP +PY++Y CN SS+ASLRLK+KQHS F Y+S+ P S
Sbjct: 253 CPYGPPGSPYTVYRD-------------TCN---SSLASLRLKSKQHSTFGYSSLQSPAS 296
Query: 101 SANNRAACQYS 111
S N ACQY+
Sbjct: 297 SLN---ACQYN 304
>gi|185132202|ref|NP_001117152.1| paired-like homeodomain transcription factor 2alpha [Salmo salar]
gi|158380239|gb|ABW37416.1| paired-like homeodomain transcription factor 2alpha [Salmo salar]
Length = 322
Score = 55.5 bits (132), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 42/71 (59%), Gaps = 20/71 (28%)
Query: 40 TCPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFNYTSITPPV 99
TCPY PPT PY +R CN SS+ASLRLKAKQHS+F YTS+ P
Sbjct: 266 TCPYAPPTPPY---VYRDT-----------CN---SSLASLRLKAKQHSSFGYTSVQNP- 307
Query: 100 SSANNRAACQY 110
A+N +ACQY
Sbjct: 308 --ASNLSACQY 316
>gi|395504318|ref|XP_003756501.1| PREDICTED: pituitary homeobox 1 [Sarcophilus harrisii]
Length = 306
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 40/71 (56%), Gaps = 19/71 (26%)
Query: 41 CPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFNYTSITPPVS 100
CPY PP +PYS+Y CN SS+ASLRLK+KQHS F Y+S+ P S
Sbjct: 254 CPYGPPGSPYSVYRD-------------TCN---SSLASLRLKSKQHSTFGYSSLQSPGS 297
Query: 101 SANNRAACQYS 111
N ACQY+
Sbjct: 298 GLN---ACQYN 305
>gi|126290051|ref|XP_001365455.1| PREDICTED: pituitary homeobox 1 [Monodelphis domestica]
Length = 306
Score = 55.1 bits (131), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 40/71 (56%), Gaps = 19/71 (26%)
Query: 41 CPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFNYTSITPPVS 100
CPY PP +PYS+Y CN SS+ASLRLK+KQHS F Y+S+ P S
Sbjct: 254 CPYGPPGSPYSVYRD-------------TCN---SSLASLRLKSKQHSTFGYSSLQSPGS 297
Query: 101 SANNRAACQYS 111
N ACQY+
Sbjct: 298 GLN---ACQYN 305
>gi|6093720|sp|P56673.1|PITX1_CHICK RecName: Full=Pituitary homeobox 1; AltName: Full=Homeobox protein
PITX1; AltName: Full=Paired-like homeodomain
transcription factor 1; AltName: Full=cPTX1
Length = 311
Score = 55.1 bits (131), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 60/112 (53%), Gaps = 25/112 (22%)
Query: 2 LPTGMTAPLTGSASPAGRRSAL--LMCLWVAELDGSVAAATCPYVPPTTPYSMYTHRPAS 59
+P+GM SA P S L + + + L+ ++++ CPY PP +PYS+Y
Sbjct: 223 MPSGMGH----SAVPGMANSGLNNINNISGSSLNSAMSSPACPYGPPGSPYSVYRD---- 274
Query: 60 SDPSLSRVAECNVMSSSIASLRLKAKQHSNFNYTSITPPVSSANNRAACQYS 111
CN SS+ASL LK+KQHS+F Y+S+ P SS N ACQY+
Sbjct: 275 ---------TCN---SSLASLALKSKQHSSFGYSSLQSPGSSLN---ACQYN 311
>gi|185133831|ref|NP_001117173.1| paired-like homeodomain transcription factor 1beta [Salmo salar]
gi|158380233|gb|ABW37413.1| paired-like homeodomain transcription factor 1beta [Salmo salar]
Length = 316
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 48/83 (57%), Gaps = 19/83 (22%)
Query: 29 VAELDGSVAAATCPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHS 88
A ++ ++++++CPY PP +PYS+Y CN SS+A+LRLK+KQH
Sbjct: 252 TATINSAMSSSSCPYGPPGSPYSVYRD-------------TCN---SSLATLRLKSKQHP 295
Query: 89 NFNYTSITPPVSSANNRAACQYS 111
F Y+ + P SS N ACQY+
Sbjct: 296 TFGYSGLQSPGSSLN---ACQYN 315
>gi|348527908|ref|XP_003451461.1| PREDICTED: pituitary homeobox 1-like [Oreochromis niloticus]
Length = 378
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 49/88 (55%), Gaps = 19/88 (21%)
Query: 24 LMCLWVAELDGSVAAATCPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLK 83
L + + ++ +++++ CPY PP +PYS+Y CN SS+ASLRLK
Sbjct: 309 LNGIGTSGINSAMSSSACPYGPPGSPYSVYRD-------------TCN---SSLASLRLK 352
Query: 84 AKQHSNFNYTSITPPVSSANNRAACQYS 111
+KQH F Y+ + P SS N ACQY+
Sbjct: 353 SKQHPTFGYSGLQSPGSSLN---ACQYN 377
>gi|185132230|ref|NP_001117154.1| paired-like homeodomain transcription factor 2beta [Salmo salar]
gi|158380241|gb|ABW37417.1| paired-like homeodomain transcription factor 2beta [Salmo salar]
Length = 319
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 42/75 (56%), Gaps = 20/75 (26%)
Query: 36 VAAATCPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFNYTSI 95
V TCPY PPT PY +R CN SS+ASLRLKAKQHS+F YTS+
Sbjct: 259 VPTPTCPYAPPTPPY---VYRDT-----------CN---SSLASLRLKAKQHSSFGYTSV 301
Query: 96 TPPVSSANNRAACQY 110
P S N +ACQY
Sbjct: 302 QNPGS---NLSACQY 313
>gi|165973350|ref|NP_001035436.3| pituitary homeobox 1 [Danio rerio]
gi|158380249|gb|ABW37421.1| paired-like homeodomain transcription factor 1 [Danio rerio]
Length = 285
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 45/76 (59%), Gaps = 19/76 (25%)
Query: 36 VAAATCPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFNYTSI 95
++++TCPY PP +PYS+Y CN SS+A+LRLK+KQH +F Y+ +
Sbjct: 228 MSSSTCPYGPPVSPYSVYRD-------------TCN---SSLATLRLKSKQHPSFGYSGL 271
Query: 96 TPPVSSANNRAACQYS 111
P SS N ACQY+
Sbjct: 272 QSPGSSLN---ACQYN 284
>gi|158380237|gb|ABW37415.1| paired-like homeodomain transcription factor 1beta [Salmo salar]
Length = 266
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 48/83 (57%), Gaps = 19/83 (22%)
Query: 29 VAELDGSVAAATCPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHS 88
A ++ ++++++CPY PP +PYS+Y CN SS+A+LRLK+KQH
Sbjct: 202 TATINSAMSSSSCPYGPPGSPYSVYRD-------------TCN---SSLATLRLKSKQHP 245
Query: 89 NFNYTSITPPVSSANNRAACQYS 111
F Y+ + P SS N ACQY+
Sbjct: 246 TFGYSGLQSPGSSLN---ACQYN 265
>gi|183207891|gb|ACC59092.1| paired-like homeodomain transcription factor 1 [Danio rerio]
Length = 285
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 45/76 (59%), Gaps = 19/76 (25%)
Query: 36 VAAATCPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFNYTSI 95
++++TCPY PP +PYS+Y CN SS+A+LRLK+KQH +F Y+ +
Sbjct: 228 MSSSTCPYGPPGSPYSVYRD-------------TCN---SSLATLRLKSKQHPSFGYSGL 271
Query: 96 TPPVSSANNRAACQYS 111
P SS N ACQY+
Sbjct: 272 QSPGSSLN---ACQYN 284
>gi|92098338|gb|AAI15353.1| Paired-like homeodomain transcription factor 1 [Danio rerio]
Length = 281
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 45/76 (59%), Gaps = 19/76 (25%)
Query: 36 VAAATCPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFNYTSI 95
++++TCPY PP +PYS+Y CN SS+A+LRLK+KQH +F Y+ +
Sbjct: 224 MSSSTCPYGPPGSPYSVYRD-------------TCN---SSLATLRLKSKQHPSFGYSGL 267
Query: 96 TPPVSSANNRAACQYS 111
P SS N ACQY+
Sbjct: 268 QSPGSSLN---ACQYN 280
>gi|194219914|ref|XP_001502776.2| PREDICTED: LOW QUALITY PROTEIN: pituitary homeobox 1-like [Equus
caballus]
Length = 290
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 44/80 (55%), Gaps = 19/80 (23%)
Query: 32 LDGSVAAATCPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFN 91
L+ +++ CPY P +PYS+Y CN SS+ASLRLK+KQHS+F
Sbjct: 229 LNSAMSPGACPYGTPASPYSVYRD-------------TCN---SSLASLRLKSKQHSSFG 272
Query: 92 YTSITPPVSSANNRAACQYS 111
Y S+ P S N ACQY+
Sbjct: 273 YGSLQGPASGLN---ACQYN 289
>gi|345326816|ref|XP_003431087.1| PREDICTED: pituitary homeobox 2-like [Ornithorhynchus anatinus]
Length = 393
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 44/80 (55%), Gaps = 20/80 (25%)
Query: 32 LDGSVAAATCPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFN 91
L+ V CPY PPT PY +Y CN SS+ASLRLKAKQHS+F
Sbjct: 329 LNSGVPTPACPYAPPTPPY-VYRD-------------TCN---SSLASLRLKAKQHSSFG 371
Query: 92 YTSITPPVSSANNRAACQYS 111
Y S+ P A+N +ACQY+
Sbjct: 372 YASVQNP---ASNLSACQYA 388
>gi|47207934|emb|CAF90371.1| unnamed protein product [Tetraodon nigroviridis]
Length = 316
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 45/77 (58%), Gaps = 20/77 (25%)
Query: 35 SVAAATCPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFNYTS 94
+V+AATCPY P PY MY CN SS+ASLRLKAKQH+NF+Y +
Sbjct: 255 AVSAATCPYAPSAGPY-MYRD-------------TCN---SSLASLRLKAKQHANFSYPA 297
Query: 95 ITPPVSSANNRAACQYS 111
+ PV+ N + CQY+
Sbjct: 298 VQNPVA---NLSPCQYA 311
>gi|432895659|ref|XP_004076098.1| PREDICTED: pituitary homeobox 1-like isoform 1 [Oryzias latipes]
Length = 316
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 49/88 (55%), Gaps = 19/88 (21%)
Query: 24 LMCLWVAELDGSVAAATCPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLK 83
L + + ++ +++++ CPY PP +PYS+Y CN SS+A+LRLK
Sbjct: 247 LNGIGTSGINSAMSSSACPYGPPGSPYSVYRD-------------TCN---SSLATLRLK 290
Query: 84 AKQHSNFNYTSITPPVSSANNRAACQYS 111
+KQH F Y+ + P SS N ACQY+
Sbjct: 291 SKQHPTFGYSGLQSPGSSLN---ACQYN 315
>gi|284930233|gb|ABN48541.2| transcription factor Pitx2 I [Cyprinus carpio]
Length = 275
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 44/80 (55%), Gaps = 20/80 (25%)
Query: 32 LDGSVAAATCPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFN 91
L+ V + CPY PPT PY +R CN SS+ASLRLKAKQHS+F
Sbjct: 211 LNSGVPTSACPYAPPTPPY---VYRDT-----------CN---SSLASLRLKAKQHSSFG 253
Query: 92 YTSITPPVSSANNRAACQYS 111
Y S+ P S N +ACQY+
Sbjct: 254 YASVQNPAS---NLSACQYA 270
>gi|432895661|ref|XP_004076099.1| PREDICTED: pituitary homeobox 1-like isoform 2 [Oryzias latipes]
Length = 265
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 49/88 (55%), Gaps = 19/88 (21%)
Query: 24 LMCLWVAELDGSVAAATCPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLK 83
L + + ++ +++++ CPY PP +PYS+Y CN SS+A+LRLK
Sbjct: 196 LNGIGTSGINSAMSSSACPYGPPGSPYSVYRD-------------TCN---SSLATLRLK 239
Query: 84 AKQHSNFNYTSITPPVSSANNRAACQYS 111
+KQH F Y+ + P SS N ACQY+
Sbjct: 240 SKQHPTFGYSGLQSPGSSLN---ACQYN 264
>gi|395817540|ref|XP_003782227.1| PREDICTED: pituitary homeobox 1 [Otolemur garnettii]
Length = 314
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 44/80 (55%), Gaps = 19/80 (23%)
Query: 32 LDGSVAAATCPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFN 91
L+ +++ CPY P +PYS+Y CN SS+ASLRLK+KQHS+F
Sbjct: 253 LNSAMSPGACPYGTPASPYSVYRD-------------TCN---SSLASLRLKSKQHSSFG 296
Query: 92 YTSITPPVSSANNRAACQYS 111
Y S+ P + N ACQY+
Sbjct: 297 YGSLQGPATGLN---ACQYN 313
>gi|6755070|ref|NP_035227.1| pituitary homeobox 1 [Mus musculus]
gi|6174906|sp|P70314.2|PITX1_MOUSE RecName: Full=Pituitary homeobox 1; AltName:
Full=Hindlimb-expressed homeobox protein backfoot;
AltName: Full=Homeobox protein P-OTX; AltName:
Full=Homeobox protein PITX1; AltName: Full=Paired-like
homeodomain transcription factor 1; AltName:
Full=Pituitary OTX-related factor
gi|1616805|gb|AAB16860.1| Ptx1 [Mus musculus]
gi|15215190|gb|AAH12696.1| Paired-like homeodomain transcription factor 1 [Mus musculus]
gi|74210934|dbj|BAE25071.1| unnamed protein product [Mus musculus]
gi|148709283|gb|EDL41229.1| paired-like homeodomain transcription factor 1, isoform CRA_a [Mus
musculus]
gi|148709284|gb|EDL41230.1| paired-like homeodomain transcription factor 1, isoform CRA_a [Mus
musculus]
Length = 315
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 43/80 (53%), Gaps = 19/80 (23%)
Query: 32 LDGSVAAATCPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFN 91
L+ +++ CPY P +PYS+Y CN SS+ASLRLK+KQHS+F
Sbjct: 254 LNSAMSPGACPYGTPASPYSVYRD-------------TCN---SSLASLRLKSKQHSSFG 297
Query: 92 YTSITPPVSSANNRAACQYS 111
Y + P S N ACQY+
Sbjct: 298 YGGLQGPASGLN---ACQYN 314
>gi|73970768|ref|XP_850773.1| PREDICTED: pituitary homeobox 1 isoform 3 [Canis lupus familiaris]
Length = 313
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 43/80 (53%), Gaps = 19/80 (23%)
Query: 32 LDGSVAAATCPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFN 91
L+ +++ CPY P +PYS+Y CN SS+ASLRLK+KQHS+F
Sbjct: 252 LNSAMSPGACPYGTPASPYSVYRD-------------TCN---SSLASLRLKSKQHSSFG 295
Query: 92 YTSITPPVSSANNRAACQYS 111
Y + P S N ACQY+
Sbjct: 296 YGGLQGPASGLN---ACQYN 312
>gi|16758428|ref|NP_446076.1| pituitary homeobox 1 [Rattus norvegicus]
gi|18202678|sp|Q99NA7.1|PITX1_RAT RecName: Full=Pituitary homeobox 1; AltName: Full=Homeobox protein
PITX1; AltName: Full=Paired-like homeodomain
transcription factor 1
gi|13699083|dbj|BAB41202.1| Ptx1 homeodomain protein [Rattus norvegicus]
gi|38303999|gb|AAH61966.1| Paired-like homeodomain 1 [Rattus norvegicus]
gi|149039836|gb|EDL93952.1| paired-like homeodomain transcription factor 1, isoform CRA_a
[Rattus norvegicus]
gi|149039837|gb|EDL93953.1| paired-like homeodomain transcription factor 1, isoform CRA_a
[Rattus norvegicus]
Length = 315
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 43/80 (53%), Gaps = 19/80 (23%)
Query: 32 LDGSVAAATCPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFN 91
L+ +++ CPY P +PYS+Y CN SS+ASLRLK+KQHS+F
Sbjct: 254 LNSAMSPGACPYGTPASPYSVYRD-------------TCN---SSLASLRLKSKQHSSFG 297
Query: 92 YTSITPPVSSANNRAACQYS 111
Y + P S N ACQY+
Sbjct: 298 YGGLQGPASGLN---ACQYN 314
>gi|346986283|ref|NP_001231299.1| pituitary homeobox 1 [Sus scrofa]
gi|336092211|gb|AEI00729.1| paired-like homeodomain 1 [Sus scrofa]
Length = 314
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 43/80 (53%), Gaps = 19/80 (23%)
Query: 32 LDGSVAAATCPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFN 91
L+ +++ CPY P +PYS+Y CN SS+ASLRLK+KQHS+F
Sbjct: 253 LNSAMSPGACPYGTPASPYSVYRD-------------TCN---SSLASLRLKSKQHSSFG 296
Query: 92 YTSITPPVSSANNRAACQYS 111
Y + P S N ACQY+
Sbjct: 297 YGGLQGPASGLN---ACQYN 313
>gi|296192770|ref|XP_002744217.1| PREDICTED: pituitary homeobox 1 isoform 2 [Callithrix jacchus]
Length = 314
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 43/80 (53%), Gaps = 19/80 (23%)
Query: 32 LDGSVAAATCPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFN 91
L+ +++ CPY P +PYS+Y CN SS+ASLRLK+KQHS+F
Sbjct: 253 LNSAMSPGACPYGTPASPYSVYRD-------------TCN---SSLASLRLKSKQHSSFG 296
Query: 92 YTSITPPVSSANNRAACQYS 111
Y + P S N ACQY+
Sbjct: 297 YGGLQGPASGLN---ACQYN 313
>gi|397518446|ref|XP_003829398.1| PREDICTED: pituitary homeobox 1 [Pan paniscus]
Length = 351
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 43/80 (53%), Gaps = 19/80 (23%)
Query: 32 LDGSVAAATCPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFN 91
L+ +++ CPY P +PYS+Y CN SS+ASLRLK+KQHS+F
Sbjct: 290 LNSAMSPGACPYGTPASPYSVYRD-------------TCN---SSLASLRLKSKQHSSFG 333
Query: 92 YTSITPPVSSANNRAACQYS 111
Y + P S N ACQY+
Sbjct: 334 YGGLQGPASGLN---ACQYN 350
>gi|152963644|ref|NP_002644.4| pituitary homeobox 1 [Homo sapiens]
gi|114601770|ref|XP_001168135.1| PREDICTED: pituitary homeobox 1 isoform 1 [Pan troglodytes]
gi|426350020|ref|XP_004042581.1| PREDICTED: pituitary homeobox 1 [Gorilla gorilla gorilla]
gi|108935922|sp|P78337.2|PITX1_HUMAN RecName: Full=Pituitary homeobox 1; AltName:
Full=Hindlimb-expressed homeobox protein backfoot;
AltName: Full=Homeobox protein PITX1; AltName:
Full=Paired-like homeodomain transcription factor 1
gi|2291093|gb|AAB65251.1| paired-like homeodomain transcription factor [Homo sapiens]
gi|14495617|gb|AAH09412.1| Paired-like homeodomain 1 [Homo sapiens]
gi|119582630|gb|EAW62226.1| paired-like homeodomain transcription factor 1, isoform CRA_a [Homo
sapiens]
gi|119582631|gb|EAW62227.1| paired-like homeodomain transcription factor 1, isoform CRA_a [Homo
sapiens]
gi|167773483|gb|ABZ92176.1| paired-like homeodomain 1 [synthetic construct]
gi|208966990|dbj|BAG73509.1| paired-like homeodomain 1 [synthetic construct]
Length = 314
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 43/80 (53%), Gaps = 19/80 (23%)
Query: 32 LDGSVAAATCPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFN 91
L+ +++ CPY P +PYS+Y CN SS+ASLRLK+KQHS+F
Sbjct: 253 LNSAMSPGACPYGTPASPYSVYRD-------------TCN---SSLASLRLKSKQHSSFG 296
Query: 92 YTSITPPVSSANNRAACQYS 111
Y + P S N ACQY+
Sbjct: 297 YGGLQGPASGLN---ACQYN 313
>gi|13277554|gb|AAH03685.1| PITX1 protein [Homo sapiens]
gi|158254702|dbj|BAF83324.1| unnamed protein product [Homo sapiens]
gi|325463757|gb|ADZ15649.1| paired-like homeodomain 1 [synthetic construct]
Length = 314
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 44/80 (55%), Gaps = 19/80 (23%)
Query: 32 LDGSVAAATCPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFN 91
L+ +++ CPY P +PYS+Y CN SS+ASLRLK+KQHS+F
Sbjct: 253 LNSAMSPGACPYGTPASPYSVYRD-------------TCN---SSLASLRLKSKQHSSFG 296
Query: 92 YTSITPPVSSANNRAACQYS 111
Y ++ P S N ACQY+
Sbjct: 297 YGALQGPASGLN---ACQYN 313
>gi|1870671|gb|AAC51126.1| hindlimb expressed homeobox protein backfoot [Homo sapiens]
Length = 314
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 43/80 (53%), Gaps = 19/80 (23%)
Query: 32 LDGSVAAATCPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFN 91
L+ +++ CPY P +PYS+Y CN SS+ASLRLK+KQHS+F
Sbjct: 253 LNSAMSPGACPYGTPASPYSVYRD-------------TCN---SSLASLRLKSKQHSSFG 296
Query: 92 YTSITPPVSSANNRAACQYS 111
Y + P S N ACQY+
Sbjct: 297 YGGLQGPASGLN---ACQYN 313
>gi|297676018|ref|XP_002815946.1| PREDICTED: pituitary homeobox 1 [Pongo abelii]
Length = 313
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 43/80 (53%), Gaps = 19/80 (23%)
Query: 32 LDGSVAAATCPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFN 91
L+ +++ CPY P +PYS+Y CN SS+ASLRLK+KQHS+F
Sbjct: 252 LNSAMSPGACPYGTPASPYSVYRD-------------TCN---SSLASLRLKSKQHSSFG 295
Query: 92 YTSITPPVSSANNRAACQYS 111
Y + P S N ACQY+
Sbjct: 296 YGGLQGPASGLN---ACQYN 312
>gi|348575063|ref|XP_003473309.1| PREDICTED: pituitary homeobox 1-like [Cavia porcellus]
Length = 309
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 43/80 (53%), Gaps = 19/80 (23%)
Query: 32 LDGSVAAATCPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFN 91
L+ +++ CPY P +PYS+Y CN SS+ASLRLK+KQHS+F
Sbjct: 248 LNSAMSPGACPYGTPASPYSVYRD-------------TCN---SSLASLRLKSKQHSSFG 291
Query: 92 YTSITPPVSSANNRAACQYS 111
Y + P S N ACQY+
Sbjct: 292 YGGLQGPASGLN---ACQYN 308
>gi|431892642|gb|ELK03075.1| Pituitary homeobox 1, partial [Pteropus alecto]
Length = 257
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 43/80 (53%), Gaps = 19/80 (23%)
Query: 32 LDGSVAAATCPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFN 91
L+ +++ CPY P +PYS+Y CN SS+ASLRLK+KQHS+F
Sbjct: 196 LNSAMSPGACPYGTPASPYSVYRD-------------TCN---SSLASLRLKSKQHSSFG 239
Query: 92 YTSITPPVSSANNRAACQYS 111
Y + P S N ACQY+
Sbjct: 240 YGGLQGPASGLN---ACQYN 256
>gi|185132206|ref|NP_001117153.1| paired-like homeodomain transcription factor 1alpha [Salmo salar]
gi|158380231|gb|ABW37412.1| paired-like homeodomain transcription factor 1alpha [Salmo salar]
Length = 316
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 49/88 (55%), Gaps = 19/88 (21%)
Query: 24 LMCLWVAELDGSVAAATCPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLK 83
L + + ++ +++++ CPY PP +PYS+Y CN SS+A+LRLK
Sbjct: 247 LNGIGTSTMNSAMSSSACPYGPPGSPYSVYRD-------------TCN---SSLATLRLK 290
Query: 84 AKQHSNFNYTSITPPVSSANNRAACQYS 111
+KQH F Y+ + P S+ N ACQY+
Sbjct: 291 SKQHPTFGYSGLQSPGSNLN---ACQYN 315
>gi|417398828|gb|JAA46447.1| Putative transcription factor ptx1 [Desmodus rotundus]
Length = 314
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 43/80 (53%), Gaps = 19/80 (23%)
Query: 32 LDGSVAAATCPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFN 91
L+ +++ CPY P +PYS+Y CN SS+ASLRLK+KQHS+F
Sbjct: 253 LNSAMSPGACPYGTPASPYSVYRD-------------TCN---SSLASLRLKSKQHSSFG 296
Query: 92 YTSITPPVSSANNRAACQYS 111
Y + P S N ACQY+
Sbjct: 297 YGGLQGPASGLN---ACQYN 313
>gi|328802693|ref|NP_001192229.1| pituitary homeobox 1 [Bos taurus]
gi|296485327|tpg|DAA27442.1| TPA: paired-like homeodomain 1 [Bos taurus]
Length = 314
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 43/80 (53%), Gaps = 19/80 (23%)
Query: 32 LDGSVAAATCPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFN 91
L+ +++ CPY P +PYS+Y CN SS+ASLRLK+KQHS+F
Sbjct: 253 LNSAMSPGACPYGTPASPYSVYRD-------------TCN---SSLASLRLKSKQHSSFG 296
Query: 92 YTSITPPVSSANNRAACQYS 111
Y + P S N ACQY+
Sbjct: 297 YGGLQGPASGLN---ACQYN 313
>gi|444517223|gb|ELV11418.1| Pituitary homeobox 1 [Tupaia chinensis]
Length = 319
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 43/80 (53%), Gaps = 19/80 (23%)
Query: 32 LDGSVAAATCPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFN 91
L+ +++ CPY P +PYS+Y CN SS+ASLRLK+KQHS+F
Sbjct: 258 LNSAMSPGACPYGTPASPYSVYRD-------------TCN---SSLASLRLKSKQHSSFG 301
Query: 92 YTSITPPVSSANNRAACQYS 111
Y + P S N ACQY+
Sbjct: 302 YGGLQGPASGLN---ACQYN 318
>gi|15823607|dbj|BAB69053.1| pitx2 [Paralichthys olivaceus]
Length = 312
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 40/71 (56%), Gaps = 20/71 (28%)
Query: 40 TCPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFNYTSITPPV 99
TCPY PPT PY +R CN SS+ASLRLKAKQHS+F Y S+ P
Sbjct: 256 TCPYAPPTPPY---VYRDT-----------CN---SSLASLRLKAKQHSSFGYASVQNP- 297
Query: 100 SSANNRAACQY 110
A N +ACQY
Sbjct: 298 --ATNLSACQY 306
>gi|1870673|gb|AAC53059.1| hindlimb expressed homeobox protein backfoot [Mus musculus]
Length = 183
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 44/82 (53%), Gaps = 19/82 (23%)
Query: 30 AELDGSVAAATCPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSN 89
+ L+ +++ CPY P +PYS+Y CN SS+ASLRLK+KQHS+
Sbjct: 120 SSLNSAMSPGACPYGTPASPYSVYRD-------------TCN---SSLASLRLKSKQHSS 163
Query: 90 FNYTSITPPVSSANNRAACQYS 111
F Y + P S N ACQY+
Sbjct: 164 FGYGGLQGPASGLN---ACQYN 182
>gi|185135897|ref|NP_001117184.1| paired-like homeodomain transcription factor 1alpha-like [Salmo
salar]
gi|158380235|gb|ABW37414.1| paired-like homeodomain transcription factor 1alpha [Salmo salar]
Length = 265
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 49/88 (55%), Gaps = 19/88 (21%)
Query: 24 LMCLWVAELDGSVAAATCPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLK 83
L + + ++ +++++ CPY PP +PYS+Y CN SS+A+LRLK
Sbjct: 196 LNGIGTSTMNSAMSSSACPYGPPGSPYSVYRD-------------TCN---SSLATLRLK 239
Query: 84 AKQHSNFNYTSITPPVSSANNRAACQYS 111
+KQH F Y+ + P +S N ACQY+
Sbjct: 240 SKQHPTFGYSGLQSPGTSLN---ACQYN 264
>gi|3168620|gb|AAC17733.1| Bft [Homo sapiens]
Length = 180
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 45/82 (54%), Gaps = 19/82 (23%)
Query: 30 AELDGSVAAATCPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSN 89
+ L+ +++ CPY P +PYS+Y CN SS+ASLRLK+KQHS+
Sbjct: 117 SSLNSAMSPGACPYGTPASPYSVYRD-------------TCN---SSLASLRLKSKQHSS 160
Query: 90 FNYTSITPPVSSANNRAACQYS 111
F Y ++ P S N ACQY+
Sbjct: 161 FGYGALQGPASGLN---ACQYN 179
>gi|348564619|ref|XP_003468102.1| PREDICTED: pituitary homeobox 2-like [Cavia porcellus]
Length = 613
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 41/71 (57%), Gaps = 20/71 (28%)
Query: 41 CPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFNYTSITPPVS 100
CPY PPT PY +Y CN SS+ASLRLKAKQHS+F Y S+ P
Sbjct: 558 CPYAPPTPPY-VYRD-------------TCN---SSLASLRLKAKQHSSFGYASVQNP-- 598
Query: 101 SANNRAACQYS 111
A+N +ACQY+
Sbjct: 599 -ASNLSACQYA 608
>gi|14164387|dbj|BAB55794.1| paired-like homeodomain transcription factor [Phasianus colchicus]
gi|14164389|dbj|BAB55795.1| paired-like homeodomain transcription factor [Numida meleagris]
Length = 118
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 55/102 (53%), Gaps = 22/102 (21%)
Query: 2 LPTGMTAPLTGSASPAGRRSAL--LMCLWVAELDGSVAAATCPYVPPTTPYSMYTHRPAS 59
+P+GM SA P S L + + + L+ ++++ CPY PP +PYS+Y
Sbjct: 37 MPSGMGH----SAVPGMANSGLNNINNISGSSLNSAMSSPACPYGPPGSPYSVYRD---- 88
Query: 60 SDPSLSRVAECNVMSSSIASLRLKAKQHSNFNYTSITPPVSS 101
CN SS+ASLRLK+KQHS+F Y+S+ P SS
Sbjct: 89 ---------TCN---SSLASLRLKSKQHSSFGYSSLQSPGSS 118
>gi|42491334|dbj|BAD10984.1| paired-like homeodomain transcription factor [Accipiter gentilis]
Length = 119
Score = 52.4 bits (124), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 55/102 (53%), Gaps = 22/102 (21%)
Query: 2 LPTGMTAPLTGSASPAGRRSAL--LMCLWVAELDGSVAAATCPYVPPTTPYSMYTHRPAS 59
+P+GM SA P S L + + + L+ ++++ CPY PP +PYS+Y
Sbjct: 37 MPSGMGH----SAVPGMANSGLNNINNISGSSLNSAMSSPACPYGPPGSPYSVYRD---- 88
Query: 60 SDPSLSRVAECNVMSSSIASLRLKAKQHSNFNYTSITPPVSS 101
CN SS+ASLRLK+KQHS+F Y+S+ P SS
Sbjct: 89 ---------TCN---SSLASLRLKSKQHSSFGYSSLQSPGSS 118
>gi|109078669|ref|XP_001110089.1| PREDICTED: pituitary homeobox 1 isoform 1 [Macaca mulatta]
gi|297295105|ref|XP_002804564.1| PREDICTED: pituitary homeobox 1 [Macaca mulatta]
gi|402872535|ref|XP_003900165.1| PREDICTED: pituitary homeobox 1 [Papio anubis]
Length = 314
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 43/80 (53%), Gaps = 19/80 (23%)
Query: 32 LDGSVAAATCPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFN 91
L+ +++ CPY P +PY++Y CN SS+ASLRLK+KQHS+F
Sbjct: 253 LNSAMSPGACPYGTPASPYTVYRD-------------TCN---SSLASLRLKSKQHSSFG 296
Query: 92 YTSITPPVSSANNRAACQYS 111
Y + P S N ACQY+
Sbjct: 297 YGGLQGPASGLN---ACQYN 313
>gi|355750199|gb|EHH54537.1| hypothetical protein EGM_15398, partial [Macaca fascicularis]
Length = 273
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 43/80 (53%), Gaps = 19/80 (23%)
Query: 32 LDGSVAAATCPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFN 91
L+ +++ CPY P +PY++Y CN SS+ASLRLK+KQHS+F
Sbjct: 212 LNSAMSPGACPYGTPASPYTVYRD-------------TCN---SSLASLRLKSKQHSSFG 255
Query: 92 YTSITPPVSSANNRAACQYS 111
Y + P S N ACQY+
Sbjct: 256 YGGLQGPASGLN---ACQYN 272
>gi|327274066|ref|XP_003221799.1| PREDICTED: pituitary homeobox 2-like isoform 2 [Anolis
carolinensis]
Length = 317
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 41/71 (57%), Gaps = 20/71 (28%)
Query: 41 CPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFNYTSITPPVS 100
CPY PPT PY +R CN SS+ASLRLKAKQHS+F Y S+ P
Sbjct: 262 CPYAPPTPPY---VYRDT-----------CN---SSLASLRLKAKQHSSFGYASVQAP-- 302
Query: 101 SANNRAACQYS 111
A+N +ACQY+
Sbjct: 303 -ASNLSACQYA 312
>gi|62857711|ref|NP_001017227.1| paired-like homeodomain 2 [Xenopus (Silurana) tropicalis]
gi|166796151|gb|AAI59023.1| paired-like homeodomain 2 [Xenopus (Silurana) tropicalis]
Length = 345
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 41/75 (54%), Gaps = 20/75 (26%)
Query: 36 VAAATCPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFNYTSI 95
V + CPY PPT PY +R CN SS+ASLRLKAKQHS+F Y S+
Sbjct: 285 VPTSACPYAPPTPPY---VYRDT-----------CN---SSLASLRLKAKQHSSFGYASV 327
Query: 96 TPPVSSANNRAACQY 110
P S N +ACQY
Sbjct: 328 QNPGS---NLSACQY 339
>gi|355691618|gb|EHH26803.1| hypothetical protein EGK_16870, partial [Macaca mulatta]
Length = 272
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 43/80 (53%), Gaps = 19/80 (23%)
Query: 32 LDGSVAAATCPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFN 91
L+ +++ CPY P +PY++Y CN SS+ASLRLK+KQHS+F
Sbjct: 211 LNSAMSPGACPYGTPASPYTVYRD-------------TCN---SSLASLRLKSKQHSSFG 254
Query: 92 YTSITPPVSSANNRAACQYS 111
Y + P S N ACQY+
Sbjct: 255 YGGLQGPASGLN---ACQYN 271
>gi|13183093|gb|AAK15048.1| paired-like homeodomain transcription factor 2 [Homo sapiens]
Length = 271
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 41/71 (57%), Gaps = 20/71 (28%)
Query: 41 CPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFNYTSITPPVS 100
CPY PPT PY +R CN SS+ASLRLKAKQHS+F Y S+ P
Sbjct: 216 CPYAPPTPPY---VYRDT-----------CN---SSLASLRLKAKQHSSFGYASVQKP-- 256
Query: 101 SANNRAACQYS 111
A+N +ACQY+
Sbjct: 257 -ASNLSACQYA 266
>gi|444524075|gb|ELV13712.1| Pituitary homeobox 2 [Tupaia chinensis]
Length = 315
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 41/71 (57%), Gaps = 20/71 (28%)
Query: 41 CPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFNYTSITPPVS 100
CPY PPT PY +Y CN SS+ASLRLKAKQHS+F Y S+ P
Sbjct: 260 CPYAPPTPPY-VYRD-------------TCN---SSLASLRLKAKQHSSFGYASVQNP-- 300
Query: 101 SANNRAACQYS 111
A+N +ACQY+
Sbjct: 301 -ASNLSACQYA 310
>gi|1737167|gb|AAC16257.1| solurshin [Homo sapiens]
Length = 271
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 41/71 (57%), Gaps = 20/71 (28%)
Query: 41 CPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFNYTSITPPVS 100
CPY PPT PY +R CN SS+ASLRLKAKQHS+F Y S+ P
Sbjct: 216 CPYAPPTPPY---VYRDT-----------CN---SSLASLRLKAKQHSSFGYASVQKP-- 256
Query: 101 SANNRAACQYS 111
A+N +ACQY+
Sbjct: 257 -ASNLSACQYA 266
>gi|410915108|ref|XP_003971029.1| PREDICTED: pituitary homeobox 1-like isoform 1 [Takifugu rubripes]
Length = 315
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 48/88 (54%), Gaps = 19/88 (21%)
Query: 24 LMCLWVAELDGSVAAATCPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLK 83
L + + ++ ++++ CPY PP +PYS+Y CN SS+A+LRLK
Sbjct: 246 LNGIGTSGINSAMSSPACPYGPPGSPYSVYRD-------------TCN---SSLATLRLK 289
Query: 84 AKQHSNFNYTSITPPVSSANNRAACQYS 111
+KQH F Y+ + P +S N ACQY+
Sbjct: 290 SKQHPTFGYSGLQSPGTSLN---ACQYN 314
>gi|410914303|ref|XP_003970627.1| PREDICTED: pituitary homeobox 2-like isoform 1 [Takifugu rubripes]
Length = 314
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 42/76 (55%), Gaps = 20/76 (26%)
Query: 36 VAAATCPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFNYTSI 95
V + CPY PPT PY +R CN SS+ASLRLKAKQHS+F Y S+
Sbjct: 254 VPTSACPYAPPTPPY---VYRDT-----------CN---SSLASLRLKAKQHSSFGYASV 296
Query: 96 TPPVSSANNRAACQYS 111
P A N +ACQY+
Sbjct: 297 QNP---ATNLSACQYA 309
>gi|47227473|emb|CAG04621.1| unnamed protein product [Tetraodon nigroviridis]
Length = 253
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 42/76 (55%), Gaps = 20/76 (26%)
Query: 36 VAAATCPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFNYTSI 95
V + CPY PPT PY +R CN SS+ASLRLKAKQHS+F Y S+
Sbjct: 193 VPTSACPYAPPTPPY---VYRDT-----------CN---SSLASLRLKAKQHSSFGYASV 235
Query: 96 TPPVSSANNRAACQYS 111
P A N +ACQY+
Sbjct: 236 QNP---ATNLSACQYA 248
>gi|355749509|gb|EHH53908.1| hypothetical protein EGM_14619 [Macaca fascicularis]
Length = 374
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 41/71 (57%), Gaps = 20/71 (28%)
Query: 41 CPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFNYTSITPPVS 100
CPY PPT PY +Y CN SS+ASLRLKAKQHS+F Y S+ P
Sbjct: 319 CPYAPPTPPY-VYRD-------------TCN---SSLASLRLKAKQHSSFGYASVQNP-- 359
Query: 101 SANNRAACQYS 111
A+N +ACQY+
Sbjct: 360 -ASNLSACQYA 369
>gi|403275548|ref|XP_003929502.1| PREDICTED: pituitary homeobox 2 isoform 2 [Saimiri boliviensis
boliviensis]
gi|403275552|ref|XP_003929504.1| PREDICTED: pituitary homeobox 2 isoform 4 [Saimiri boliviensis
boliviensis]
gi|426231271|ref|XP_004009663.1| PREDICTED: pituitary homeobox 2 isoform 2 [Ovis aries]
Length = 317
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 41/71 (57%), Gaps = 20/71 (28%)
Query: 41 CPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFNYTSITPPVS 100
CPY PPT PY +R CN SS+ASLRLKAKQHS+F Y S+ P
Sbjct: 262 CPYAPPTPPY---VYRDT-----------CN---SSLASLRLKAKQHSSFGYASVQNP-- 302
Query: 101 SANNRAACQYS 111
A+N +ACQY+
Sbjct: 303 -ASNLSACQYA 312
>gi|402870242|ref|XP_003899144.1| PREDICTED: pituitary homeobox 2 isoform 1 [Papio anubis]
gi|402870248|ref|XP_003899147.1| PREDICTED: pituitary homeobox 2 isoform 4 [Papio anubis]
Length = 317
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 41/71 (57%), Gaps = 20/71 (28%)
Query: 41 CPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFNYTSITPPVS 100
CPY PPT PY +R CN SS+ASLRLKAKQHS+F Y S+ P
Sbjct: 262 CPYAPPTPPY---VYRDT-----------CN---SSLASLRLKAKQHSSFGYASVQNP-- 302
Query: 101 SANNRAACQYS 111
A+N +ACQY+
Sbjct: 303 -ASNLSACQYA 312
>gi|338722603|ref|XP_003364573.1| PREDICTED: pituitary homeobox 2 [Equus caballus]
gi|338722605|ref|XP_003364574.1| PREDICTED: pituitary homeobox 2 [Equus caballus]
Length = 317
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 41/71 (57%), Gaps = 20/71 (28%)
Query: 41 CPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFNYTSITPPVS 100
CPY PPT PY +R CN SS+ASLRLKAKQHS+F Y S+ P
Sbjct: 262 CPYAPPTPPY---VYRDT-----------CN---SSLASLRLKAKQHSSFGYASVQNP-- 302
Query: 101 SANNRAACQYS 111
A+N +ACQY+
Sbjct: 303 -ASNLSACQYA 312
>gi|291401268|ref|XP_002717161.1| PREDICTED: paired-like homeodomain 1 isoform 1 [Oryctolagus
cuniculus]
Length = 317
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 41/71 (57%), Gaps = 20/71 (28%)
Query: 41 CPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFNYTSITPPVS 100
CPY PPT PY +R CN SS+ASLRLKAKQHS+F Y S+ P
Sbjct: 262 CPYAPPTPPY---VYRDT-----------CN---SSLASLRLKAKQHSSFGYASVQNP-- 302
Query: 101 SANNRAACQYS 111
A+N +ACQY+
Sbjct: 303 -ASNLSACQYA 312
>gi|74002160|ref|XP_863661.1| PREDICTED: pituitary homeobox 2 isoform 3 [Canis lupus familiaris]
gi|301764280|ref|XP_002917558.1| PREDICTED: pituitary homeobox 2-like isoform 1 [Ailuropoda
melanoleuca]
gi|345795854|ref|XP_003434086.1| PREDICTED: pituitary homeobox 2 [Canis lupus familiaris]
Length = 317
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 41/71 (57%), Gaps = 20/71 (28%)
Query: 41 CPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFNYTSITPPVS 100
CPY PPT PY +R CN SS+ASLRLKAKQHS+F Y S+ P
Sbjct: 262 CPYAPPTPPY---VYRDT-----------CN---SSLASLRLKAKQHSSFGYASVQNP-- 302
Query: 101 SANNRAACQYS 111
A+N +ACQY+
Sbjct: 303 -ASNLSACQYA 312
>gi|410914305|ref|XP_003970628.1| PREDICTED: pituitary homeobox 2-like isoform 2 [Takifugu rubripes]
Length = 268
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 42/76 (55%), Gaps = 20/76 (26%)
Query: 36 VAAATCPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFNYTSI 95
V + CPY PPT PY +R CN SS+ASLRLKAKQHS+F Y S+
Sbjct: 208 VPTSACPYAPPTPPY---VYRDT-----------CN---SSLASLRLKAKQHSSFGYASV 250
Query: 96 TPPVSSANNRAACQYS 111
P A N +ACQY+
Sbjct: 251 QNP---ATNLSACQYA 263
>gi|109075372|ref|XP_001090922.1| PREDICTED: pituitary homeobox 2-like isoform 1 [Macaca mulatta]
gi|109075374|ref|XP_001091045.1| PREDICTED: pituitary homeobox 2-like isoform 2 [Macaca mulatta]
Length = 317
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 41/71 (57%), Gaps = 20/71 (28%)
Query: 41 CPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFNYTSITPPVS 100
CPY PPT PY +R CN SS+ASLRLKAKQHS+F Y S+ P
Sbjct: 262 CPYAPPTPPY---VYRDT-----------CN---SSLASLRLKAKQHSSFGYASVQNP-- 302
Query: 101 SANNRAACQYS 111
A+N +ACQY+
Sbjct: 303 -ASNLSACQYA 312
>gi|30841039|ref|NP_035228.2| pituitary homeobox 2 isoform b [Mus musculus]
gi|6174908|sp|P97474.2|PITX2_MOUSE RecName: Full=Pituitary homeobox 2; AltName: Full=ALL1-responsive
protein ARP1; AltName: Full=BRX1 homeoprotein; AltName:
Full=Homeobox protein PITX2; AltName:
Full=Orthodenticle-like homeobox 2; AltName:
Full=Paired-like homeodomain transcription factor 2;
AltName: Full=Paired-like homeodomain transcription
factor Munc 30; AltName: Full=Solurshin
gi|1930006|gb|AAC53119.1| pituitary homeobox 2 isoform b [Mus musculus]
gi|148680297|gb|EDL12244.1| paired-like homeodomain transcription factor 2, isoform CRA_a [Mus
musculus]
Length = 317
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 41/71 (57%), Gaps = 20/71 (28%)
Query: 41 CPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFNYTSITPPVS 100
CPY PPT PY +R CN SS+ASLRLKAKQHS+F Y S+ P
Sbjct: 262 CPYAPPTPPY---VYRDT-----------CN---SSLASLRLKAKQHSSFGYASVQNP-- 302
Query: 101 SANNRAACQYS 111
A+N +ACQY+
Sbjct: 303 -ASNLSACQYA 312
>gi|395851310|ref|XP_003798205.1| PREDICTED: pituitary homeobox 2 isoform 3 [Otolemur garnettii]
Length = 317
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 41/71 (57%), Gaps = 20/71 (28%)
Query: 41 CPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFNYTSITPPVS 100
CPY PPT PY +R CN SS+ASLRLKAKQHS+F Y S+ P
Sbjct: 262 CPYAPPTPPY---VYRDT-----------CN---SSLASLRLKAKQHSSFGYASVQNP-- 302
Query: 101 SANNRAACQYS 111
A+N +ACQY+
Sbjct: 303 -ASNLSACQYA 312
>gi|4512222|dbj|BAA75248.1| Brx1b homeoprotein [Mus musculus]
Length = 317
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 41/71 (57%), Gaps = 20/71 (28%)
Query: 41 CPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFNYTSITPPVS 100
CPY PPT PY +R CN SS+ASLRLKAKQHS+F Y S+ P
Sbjct: 262 CPYAPPTPPY---VYRDT-----------CN---SSLASLRLKAKQHSSFGYASVQNP-- 302
Query: 101 SANNRAACQYS 111
A+N +ACQY+
Sbjct: 303 -ASNLSACQYA 312
>gi|24234708|ref|NP_700475.1| pituitary homeobox 2 isoform b [Homo sapiens]
gi|324710992|ref|NP_001191326.1| pituitary homeobox 2 isoform b [Homo sapiens]
gi|324710994|ref|NP_001191327.1| pituitary homeobox 2 isoform b [Homo sapiens]
gi|397519871|ref|XP_003830076.1| PREDICTED: pituitary homeobox 2 isoform 2 [Pan paniscus]
gi|6174907|sp|Q99697.2|PITX2_HUMAN RecName: Full=Pituitary homeobox 2; AltName: Full=ALL1-responsive
protein ARP1; AltName: Full=Homeobox protein PITX2;
AltName: Full=Paired-like homeodomain transcription
factor 2; AltName: Full=RIEG bicoid-related homeobox
transcription factor; AltName: Full=Solurshin
gi|3078009|gb|AAC39717.1| ALL1 responsive protein ARP1b [Homo sapiens]
gi|119626667|gb|EAX06262.1| paired-like homeodomain transcription factor 2, isoform CRA_a [Homo
sapiens]
gi|193785429|dbj|BAG54582.1| unnamed protein product [Homo sapiens]
gi|410342051|gb|JAA39972.1| paired-like homeodomain 2 [Pan troglodytes]
Length = 317
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 41/71 (57%), Gaps = 20/71 (28%)
Query: 41 CPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFNYTSITPPVS 100
CPY PPT PY +R CN SS+ASLRLKAKQHS+F Y S+ P
Sbjct: 262 CPYAPPTPPY---VYRDT-----------CN---SSLASLRLKAKQHSSFGYASVQNP-- 302
Query: 101 SANNRAACQYS 111
A+N +ACQY+
Sbjct: 303 -ASNLSACQYA 312
>gi|62204427|gb|AAH92922.1| Paired-like homeodomain transcription factor 2 [Danio rerio]
Length = 314
Score = 51.6 bits (122), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 41/71 (57%), Gaps = 20/71 (28%)
Query: 41 CPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFNYTSITPPVS 100
CPY PPT PY +R CN SS+ASLRLKAKQHS+F Y S+ P
Sbjct: 259 CPYAPPTPPY---VYRDT-----------CN---SSLASLRLKAKQHSSFGYASVQNP-- 299
Query: 101 SANNRAACQYS 111
A+N +ACQY+
Sbjct: 300 -ASNLSACQYA 309
>gi|172046402|emb|CAP91067.1| Pitx2cbeta [Mus musculus]
Length = 290
Score = 51.6 bits (122), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 41/71 (57%), Gaps = 20/71 (28%)
Query: 41 CPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFNYTSITPPVS 100
CPY PPT PY +R CN SS+ASLRLKAKQHS+F Y S+ P
Sbjct: 235 CPYAPPTPPY---VYRDT-----------CN---SSLASLRLKAKQHSSFGYASVQNP-- 275
Query: 101 SANNRAACQYS 111
A+N +ACQY+
Sbjct: 276 -ASNLSACQYA 285
>gi|149025925|gb|EDL82168.1| paired-like homeodomain transcription factor 2, isoform CRA_a
[Rattus norvegicus]
Length = 317
Score = 51.6 bits (122), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 41/71 (57%), Gaps = 20/71 (28%)
Query: 41 CPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFNYTSITPPVS 100
CPY PPT PY +R CN SS+ASLRLKAKQHS+F Y S+ P
Sbjct: 262 CPYAPPTPPY---VYRDT-----------CN---SSLASLRLKAKQHSSFGYASVQNP-- 302
Query: 101 SANNRAACQYS 111
A+N +ACQY+
Sbjct: 303 -ASNLSACQYA 312
>gi|18859235|ref|NP_571050.1| pituitary homeobox 2 [Danio rerio]
gi|18203562|sp|Q9W5Z2.1|PITX2_DANRE RecName: Full=Pituitary homeobox 2; AltName: Full=Homeobox protein
PITX2; AltName: Full=Paired-like homeodomain
transcription factor 2
gi|4959544|gb|AAD34390.1|AF132446_1 transcription factor Pitx2 isoform c [Danio rerio]
gi|5107929|gb|AAD40179.1|AF156905_1 transcription factor Pitx2c [Danio rerio]
Length = 314
Score = 51.6 bits (122), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 41/71 (57%), Gaps = 20/71 (28%)
Query: 41 CPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFNYTSITPPVS 100
CPY PPT PY +R CN SS+ASLRLKAKQHS+F Y S+ P
Sbjct: 259 CPYAPPTPPY---VYRDT-----------CN---SSLASLRLKAKQHSSFGYASVQNP-- 299
Query: 101 SANNRAACQYS 111
A+N +ACQY+
Sbjct: 300 -ASNLSACQYA 309
>gi|410957007|ref|XP_003985126.1| PREDICTED: pituitary homeobox 2 isoform 3 [Felis catus]
Length = 317
Score = 51.6 bits (122), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 41/71 (57%), Gaps = 20/71 (28%)
Query: 41 CPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFNYTSITPPVS 100
CPY PPT PY +R CN SS+ASLRLKAKQHS+F Y S+ P
Sbjct: 262 CPYAPPTPPY---VYRDT-----------CN---SSLASLRLKAKQHSSFGYASVQNP-- 302
Query: 101 SANNRAACQYS 111
A+N +ACQY+
Sbjct: 303 -ASNLSACQYA 312
>gi|390460514|ref|XP_003732496.1| PREDICTED: pituitary homeobox 2 [Callithrix jacchus]
gi|390460517|ref|XP_003732497.1| PREDICTED: pituitary homeobox 2 [Callithrix jacchus]
Length = 317
Score = 51.6 bits (122), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 41/71 (57%), Gaps = 20/71 (28%)
Query: 41 CPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFNYTSITPPVS 100
CPY PPT PY +R CN SS+ASLRLKAKQHS+F Y S+ P
Sbjct: 262 CPYAPPTPPY---VYRDT-----------CN---SSLASLRLKAKQHSSFGYASVQNP-- 302
Query: 101 SANNRAACQYS 111
A+N +ACQY+
Sbjct: 303 -ASNLSACQYA 312
>gi|431897152|gb|ELK06414.1| Pituitary homeobox 2 [Pteropus alecto]
Length = 325
Score = 51.6 bits (122), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 41/71 (57%), Gaps = 20/71 (28%)
Query: 41 CPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFNYTSITPPVS 100
CPY PPT PY +R CN SS+ASLRLKAKQHS+F Y S+ P
Sbjct: 270 CPYAPPTPPY---VYRDT-----------CN---SSLASLRLKAKQHSSFGYASVQNP-- 310
Query: 101 SANNRAACQYS 111
A+N +ACQY+
Sbjct: 311 -ASNLSACQYA 320
>gi|46393910|gb|AAS91493.1| transcription factor, partial [Gasterosteus aculeatus]
Length = 150
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 43/78 (55%), Gaps = 20/78 (25%)
Query: 36 VAAATCPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFNYTSI 95
V + CPY PPT PY +R CN SS+ASLRLKAKQHS+F Y S+
Sbjct: 90 VPTSACPYAPPTPPY---VYR-----------DTCN---SSLASLRLKAKQHSSFGYASV 132
Query: 96 TPPVSSANNRAACQYSDE 113
P A N +ACQY+ +
Sbjct: 133 QNP---ATNLSACQYAVD 147
>gi|410957005|ref|XP_003985125.1| PREDICTED: pituitary homeobox 2 isoform 2 [Felis catus]
Length = 332
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 40/71 (56%), Gaps = 20/71 (28%)
Query: 41 CPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFNYTSITPPVS 100
CPY PPT PY +R CN SS+ASLRLKAKQHS+F Y S+ P S
Sbjct: 277 CPYAPPTPPY---VYRDT-----------CN---SSLASLRLKAKQHSSFGYASVQNPAS 319
Query: 101 SANNRAACQYS 111
N +ACQY+
Sbjct: 320 ---NLSACQYA 327
>gi|397519875|ref|XP_003830078.1| PREDICTED: pituitary homeobox 2 isoform 4 [Pan paniscus]
Length = 304
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 40/71 (56%), Gaps = 20/71 (28%)
Query: 41 CPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFNYTSITPPVS 100
CPY PPT PY +R CN SS+ASLRLKAKQHS+F Y S+ P S
Sbjct: 249 CPYAPPTPPY---VYRDT-----------CN---SSLASLRLKAKQHSSFGYASVQNPAS 291
Query: 101 SANNRAACQYS 111
N +ACQY+
Sbjct: 292 ---NLSACQYA 299
>gi|426231275|ref|XP_004009665.1| PREDICTED: pituitary homeobox 2 isoform 4 [Ovis aries]
Length = 304
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 40/71 (56%), Gaps = 20/71 (28%)
Query: 41 CPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFNYTSITPPVS 100
CPY PPT PY +R CN SS+ASLRLKAKQHS+F Y S+ P S
Sbjct: 249 CPYAPPTPPY---VYRDT-----------CN---SSLASLRLKAKQHSSFGYASVQNPAS 291
Query: 101 SANNRAACQYS 111
N +ACQY+
Sbjct: 292 ---NLSACQYA 299
>gi|172046400|emb|CAP79627.1| paired-like homeodomain transcription factor 2, isoform 2b2 [Mus
musculus]
Length = 304
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 40/71 (56%), Gaps = 20/71 (28%)
Query: 41 CPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFNYTSITPPVS 100
CPY PPT PY +R CN SS+ASLRLKAKQHS+F Y S+ P S
Sbjct: 249 CPYAPPTPPY---VYRDT-----------CN---SSLASLRLKAKQHSSFGYASVQNPAS 291
Query: 101 SANNRAACQYS 111
N +ACQY+
Sbjct: 292 ---NLSACQYA 299
>gi|7271777|gb|AAF44618.1|AF201091_1 paired-like homeodomain transcription factor Munc 30, partial [Mus
musculus]
Length = 314
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 41/71 (57%), Gaps = 20/71 (28%)
Query: 41 CPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFNYTSITPPVS 100
CPY PPT PY +R CN SS+ASLRLKAKQHS+F Y S+ P
Sbjct: 259 CPYAPPTPPY---VYRDT-----------CN---SSLASLRLKAKQHSSFGYASVQNP-- 299
Query: 101 SANNRAACQYS 111
A+N +ACQY+
Sbjct: 300 -ASNLSACQYA 309
>gi|301764282|ref|XP_002917559.1| PREDICTED: pituitary homeobox 2-like isoform 2 [Ailuropoda
melanoleuca]
gi|281346789|gb|EFB22373.1| hypothetical protein PANDA_005886 [Ailuropoda melanoleuca]
Length = 325
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 41/71 (57%), Gaps = 20/71 (28%)
Query: 41 CPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFNYTSITPPVS 100
CPY PPT PY +R CN SS+ASLRLKAKQHS+F Y S+ P
Sbjct: 270 CPYAPPTPPY---VYRDT-----------CN---SSLASLRLKAKQHSSFGYASVQNP-- 310
Query: 101 SANNRAACQYS 111
A+N +ACQY+
Sbjct: 311 -ASNLSACQYA 320
>gi|410957013|ref|XP_003985129.1| PREDICTED: pituitary homeobox 2 isoform 6 [Felis catus]
Length = 304
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 41/71 (57%), Gaps = 20/71 (28%)
Query: 41 CPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFNYTSITPPVS 100
CPY PPT PY +R CN SS+ASLRLKAKQHS+F Y S+ P
Sbjct: 249 CPYAPPTPPY---VYRDT-----------CN---SSLASLRLKAKQHSSFGYASVQNP-- 289
Query: 101 SANNRAACQYS 111
A+N +ACQY+
Sbjct: 290 -ASNLSACQYA 299
>gi|432114807|gb|ELK36551.1| Pituitary homeobox 2 [Myotis davidii]
Length = 292
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 40/71 (56%), Gaps = 20/71 (28%)
Query: 41 CPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFNYTSITPPVS 100
CPY PPT PY +R CN SS+ASLRLKAKQHS+F Y S+ P S
Sbjct: 237 CPYAPPTPPY---VYRDT-----------CN---SSLASLRLKAKQHSSFGYASVQNPAS 279
Query: 101 SANNRAACQYS 111
N +ACQY+
Sbjct: 280 ---NLSACQYA 287
>gi|109948271|ref|NP_001035970.1| pituitary homeobox 2 isoform 1 [Rattus norvegicus]
gi|17380159|sp|Q9R0W1.1|PITX2_RAT RecName: Full=Pituitary homeobox 2; AltName: Full=Homeobox protein
PITX2; AltName: Full=Paired-like homeodomain
transcription factor 2; AltName: Full=rPtx2
gi|5706494|emb|CAB52283.1| homeodomain protein Ptx2A [Rattus norvegicus]
gi|149025927|gb|EDL82170.1| paired-like homeodomain transcription factor 2, isoform CRA_c
[Rattus norvegicus]
Length = 324
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 41/71 (57%), Gaps = 20/71 (28%)
Query: 41 CPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFNYTSITPPVS 100
CPY PPT PY +R CN SS+ASLRLKAKQHS+F Y S+ P
Sbjct: 269 CPYAPPTPPY---VYRDT-----------CN---SSLASLRLKAKQHSSFGYASVQNP-- 309
Query: 101 SANNRAACQYS 111
A+N +ACQY+
Sbjct: 310 -ASNLSACQYA 319
>gi|109948275|ref|NP_001035967.1| pituitary homeobox 2 isoform c [Mus musculus]
gi|3078015|gb|AAC40087.1| ALL1 responsive protein ARP1c [Mus musculus]
gi|49522682|gb|AAH75660.1| Paired-like homeodomain transcription factor 2 [Mus musculus]
gi|148680299|gb|EDL12246.1| paired-like homeodomain transcription factor 2, isoform CRA_c [Mus
musculus]
Length = 324
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 41/71 (57%), Gaps = 20/71 (28%)
Query: 41 CPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFNYTSITPPVS 100
CPY PPT PY +R CN SS+ASLRLKAKQHS+F Y S+ P
Sbjct: 269 CPYAPPTPPY---VYRDT-----------CN---SSLASLRLKAKQHSSFGYASVQNP-- 309
Query: 101 SANNRAACQYS 111
A+N +ACQY+
Sbjct: 310 -ASNLSACQYA 319
>gi|449500088|ref|XP_004174919.1| PREDICTED: LOW QUALITY PROTEIN: pituitary homeobox 2 [Taeniopygia
guttata]
Length = 334
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 40/71 (56%), Gaps = 20/71 (28%)
Query: 41 CPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFNYTSITPPVS 100
CPY PPT PY +R CN SS+ASLRLKAKQHS+F Y S+ P S
Sbjct: 279 CPYAPPTPPY---VYRDT-----------CN---SSLASLRLKAKQHSSFGYASVQNPAS 321
Query: 101 SANNRAACQYS 111
N +ACQY+
Sbjct: 322 ---NLSACQYA 329
>gi|21361183|ref|NP_000316.2| pituitary homeobox 2 isoform c [Homo sapiens]
gi|114595678|ref|XP_001141234.1| PREDICTED: pituitary homeobox 2 isoform 3 [Pan troglodytes]
gi|397519869|ref|XP_003830075.1| PREDICTED: pituitary homeobox 2 isoform 1 [Pan paniscus]
gi|426345241|ref|XP_004040329.1| PREDICTED: pituitary homeobox 2 [Gorilla gorilla gorilla]
gi|3078011|gb|AAC39718.1| ALL1 responsive protein ARP1c [Homo sapiens]
gi|17315124|gb|AAH13998.1| Paired-like homeodomain 2 [Homo sapiens]
gi|119626668|gb|EAX06263.1| paired-like homeodomain transcription factor 2, isoform CRA_b [Homo
sapiens]
gi|123993501|gb|ABM84352.1| paired-like homeodomain transcription factor 2 [synthetic
construct]
gi|124000463|gb|ABM87740.1| paired-like homeodomain transcription factor 2 [synthetic
construct]
gi|189054179|dbj|BAG36699.1| unnamed protein product [Homo sapiens]
gi|261860068|dbj|BAI46556.1| paired-like homeodomain 2 [synthetic construct]
gi|410342053|gb|JAA39973.1| paired-like homeodomain 2 [Pan troglodytes]
Length = 324
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 41/71 (57%), Gaps = 20/71 (28%)
Query: 41 CPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFNYTSITPPVS 100
CPY PPT PY +R CN SS+ASLRLKAKQHS+F Y S+ P
Sbjct: 269 CPYAPPTPPY---VYRDT-----------CN---SSLASLRLKAKQHSSFGYASVQNP-- 309
Query: 101 SANNRAACQYS 111
A+N +ACQY+
Sbjct: 310 -ASNLSACQYA 319
>gi|410915110|ref|XP_003971030.1| PREDICTED: pituitary homeobox 1-like isoform 2 [Takifugu rubripes]
Length = 265
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 48/88 (54%), Gaps = 19/88 (21%)
Query: 24 LMCLWVAELDGSVAAATCPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLK 83
L + + ++ ++++ CPY PP +PYS+Y CN SS+A+LRLK
Sbjct: 196 LNGIGTSGINSAMSSPACPYGPPGSPYSVYRD-------------TCN---SSLATLRLK 239
Query: 84 AKQHSNFNYTSITPPVSSANNRAACQYS 111
+KQH F Y+ + P +S N ACQY+
Sbjct: 240 SKQHPTFGYSGLQSPGTSLN---ACQYN 264
>gi|9506975|ref|NP_062207.1| pituitary homeobox 2 isoform 2 [Rattus norvegicus]
gi|109948277|ref|NP_001035969.1| pituitary homeobox 2 isoform a [Mus musculus]
gi|109075378|ref|XP_001091165.1| PREDICTED: pituitary homeobox 2-like isoform 3 [Macaca mulatta]
gi|402870244|ref|XP_003899145.1| PREDICTED: pituitary homeobox 2 isoform 2 [Papio anubis]
gi|1724116|gb|AAB38505.1| orthodenticle-like homeobox 2 [Mus musculus]
gi|3078013|gb|AAC40086.1| ALL1 responsive protein ARP1a [Mus musculus]
gi|3834392|gb|AAC70909.1| homeobox protein [Rattus norvegicus]
gi|5706496|emb|CAB52284.1| homeodomain protein Ptx2B [Rattus norvegicus]
gi|148680298|gb|EDL12245.1| paired-like homeodomain transcription factor 2, isoform CRA_b [Mus
musculus]
gi|149025926|gb|EDL82169.1| paired-like homeodomain transcription factor 2, isoform CRA_b
[Rattus norvegicus]
Length = 271
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 40/71 (56%), Gaps = 20/71 (28%)
Query: 41 CPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFNYTSITPPVS 100
CPY PPT PY +R CN SS+ASLRLKAKQHS+F Y S+ P S
Sbjct: 216 CPYAPPTPPY---VYRDT-----------CN---SSLASLRLKAKQHSSFGYASVQNPAS 258
Query: 101 SANNRAACQYS 111
N +ACQY+
Sbjct: 259 ---NLSACQYA 266
>gi|74002156|ref|XP_851370.1| PREDICTED: pituitary homeobox 2 isoform 2 [Canis lupus familiaris]
Length = 325
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 41/71 (57%), Gaps = 20/71 (28%)
Query: 41 CPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFNYTSITPPVS 100
CPY PPT PY +R CN SS+ASLRLKAKQHS+F Y S+ P
Sbjct: 270 CPYAPPTPPY---VYRDT-----------CN---SSLASLRLKAKQHSSFGYASVQNP-- 310
Query: 101 SANNRAACQYS 111
A+N +ACQY+
Sbjct: 311 -ASNLSACQYA 320
>gi|185133870|ref|NP_001117175.1| paired-like homeodomain transcription factor 2alphaA [Salmo salar]
gi|158380247|gb|ABW37420.1| paired-like homeodomain transcription factor 2alphaA [Salmo salar]
Length = 270
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 43/76 (56%), Gaps = 20/76 (26%)
Query: 36 VAAATCPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFNYTSI 95
V TCPY PPT PY +R CN SS+ASLR KAKQHS+F YTS+
Sbjct: 210 VPTPTCPYAPPTPPY---VYRDT-----------CN---SSLASLRPKAKQHSSFGYTSV 252
Query: 96 TPPVSSANNRAACQYS 111
P A+N +ACQY+
Sbjct: 253 QNP---ASNLSACQYA 265
>gi|432901826|ref|XP_004076966.1| PREDICTED: pituitary homeobox 3-like [Oryzias latipes]
Length = 294
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 43/77 (55%), Gaps = 20/77 (25%)
Query: 35 SVAAATCPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFNYTS 94
+V AATCPY +PY MY CN SS+ASLRLKAKQH+NF Y +
Sbjct: 233 AVTAATCPYATTASPY-MYRD-------------TCN---SSLASLRLKAKQHTNFAYPT 275
Query: 95 ITPPVSSANNRAACQYS 111
+ PVS N + CQY+
Sbjct: 276 VQNPVS---NLSPCQYA 289
>gi|4512220|dbj|BAA75247.1| Brx1a homeoprotein [Mus musculus]
Length = 324
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 41/71 (57%), Gaps = 20/71 (28%)
Query: 41 CPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFNYTSITPPVS 100
CPY PPT PY +R CN SS+ASLRLKAKQHS+F Y S+ P
Sbjct: 269 CPYAPPTPPY---VYRDT-----------CN---SSLASLRLKAKQHSSFGYASVQNP-- 309
Query: 101 SANNRAACQYS 111
A+N +ACQY+
Sbjct: 310 -ASNLSACQYA 319
>gi|269854613|gb|ACZ51351.1| transcription factor Pitx3 [Haplochromis burtoni]
Length = 295
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 43/77 (55%), Gaps = 20/77 (25%)
Query: 35 SVAAATCPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFNYTS 94
+V AATCPY +PY MY CN SS+ASLRLKAKQH+NF Y +
Sbjct: 234 AVTAATCPYATTASPY-MYRD-------------TCN---SSLASLRLKAKQHTNFAYPA 276
Query: 95 ITPPVSSANNRAACQYS 111
+ PVS N + CQY+
Sbjct: 277 VQNPVS---NLSPCQYA 290
>gi|194208516|ref|XP_001916416.1| PREDICTED: pituitary homeobox 2 isoform 1 [Equus caballus]
gi|338722607|ref|XP_003364575.1| PREDICTED: pituitary homeobox 2 [Equus caballus]
gi|395851308|ref|XP_003798204.1| PREDICTED: pituitary homeobox 2 isoform 2 [Otolemur garnettii]
Length = 271
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 40/71 (56%), Gaps = 20/71 (28%)
Query: 41 CPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFNYTSITPPVS 100
CPY PPT PY +R CN SS+ASLRLKAKQHS+F Y S+ P S
Sbjct: 216 CPYAPPTPPY---VYRDT-----------CN---SSLASLRLKAKQHSSFGYASVQNPAS 258
Query: 101 SANNRAACQYS 111
N +ACQY+
Sbjct: 259 ---NLSACQYA 266
>gi|410957011|ref|XP_003985128.1| PREDICTED: pituitary homeobox 2 isoform 5 [Felis catus]
Length = 286
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 40/71 (56%), Gaps = 20/71 (28%)
Query: 41 CPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFNYTSITPPVS 100
CPY PPT PY +R CN SS+ASLRLKAKQHS+F Y S+ P S
Sbjct: 231 CPYAPPTPPY---VYRDT-----------CN---SSLASLRLKAKQHSSFGYASVQNPAS 273
Query: 101 SANNRAACQYS 111
N +ACQY+
Sbjct: 274 ---NLSACQYA 281
>gi|1737173|gb|AAB38864.1| solurshin, partial [Mus musculus]
Length = 255
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 40/71 (56%), Gaps = 20/71 (28%)
Query: 41 CPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFNYTSITPPVS 100
CPY PPT PY +R CN SS+ASLRLKAKQHS+F Y S+ P S
Sbjct: 200 CPYAPPTPPY---VYRDT-----------CN---SSLASLRLKAKQHSSFGYASVQNPAS 242
Query: 101 SANNRAACQYS 111
N +ACQY+
Sbjct: 243 ---NLSACQYA 250
>gi|296195751|ref|XP_002745524.1| PREDICTED: pituitary homeobox 2 isoform 2 [Callithrix jacchus]
Length = 325
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 41/71 (57%), Gaps = 20/71 (28%)
Query: 41 CPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFNYTSITPPVS 100
CPY PPT PY +R CN SS+ASLRLKAKQHS+F Y S+ P
Sbjct: 270 CPYAPPTPPY---VYRDT-----------CN---SSLASLRLKAKQHSSFGYASVQNP-- 310
Query: 101 SANNRAACQYS 111
A+N +ACQY+
Sbjct: 311 -ASNLSACQYA 320
>gi|1930008|gb|AAC53120.1| pituitary homeobox 2 isoform a [Mus musculus]
Length = 271
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 40/71 (56%), Gaps = 20/71 (28%)
Query: 41 CPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFNYTSITPPVS 100
CPY PPT PY +R CN SS+ASLRLKAKQHS+F Y S+ P S
Sbjct: 216 CPYAPPTPPY---VYRDT-----------CN---SSLASLRLKAKQHSSFGYASVQNPAS 258
Query: 101 SANNRAACQYS 111
N +ACQY+
Sbjct: 259 ---NLSACQYA 266
>gi|45384358|ref|NP_990341.1| pituitary homeobox 2 [Gallus gallus]
gi|6093722|sp|O93385.1|PITX2_CHICK RecName: Full=Pituitary homeobox 2; AltName: Full=Homeobox protein
PITX2; Short=cPITX2; AltName: Full=Paired-like
homeodomain transcription factor 2
gi|3335643|gb|AAC27322.1| transcription factor Pitx2 [Gallus gallus]
Length = 333
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 39/70 (55%), Gaps = 20/70 (28%)
Query: 41 CPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFNYTSITPPVS 100
CPY PPT PY +R CN SS+ASLRLKAKQHS+F Y S+ P S
Sbjct: 278 CPYAPPTPPY---VYRDT-----------CN---SSLASLRLKAKQHSSFGYASVQNPAS 320
Query: 101 SANNRAACQY 110
N +ACQY
Sbjct: 321 ---NLSACQY 327
>gi|348511920|ref|XP_003443491.1| PREDICTED: pituitary homeobox 2-like isoform 1 [Oreochromis
niloticus]
Length = 313
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 40/71 (56%), Gaps = 20/71 (28%)
Query: 41 CPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFNYTSITPPVS 100
CPY PPT PY +R CN SS+ASLRLKAKQHS+F Y S+ P
Sbjct: 258 CPYAPPTPPY---VYRDT-----------CN---SSLASLRLKAKQHSSFGYASVQNP-- 298
Query: 101 SANNRAACQYS 111
A N +ACQY+
Sbjct: 299 -ATNLSACQYA 308
>gi|345795856|ref|XP_003434087.1| PREDICTED: pituitary homeobox 2 [Canis lupus familiaris]
gi|345795858|ref|XP_003434088.1| PREDICTED: pituitary homeobox 2 [Canis lupus familiaris]
Length = 271
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 40/71 (56%), Gaps = 20/71 (28%)
Query: 41 CPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFNYTSITPPVS 100
CPY PPT PY +R CN SS+ASLRLKAKQHS+F Y S+ P S
Sbjct: 216 CPYAPPTPPY---VYRDT-----------CN---SSLASLRLKAKQHSSFGYASVQNPAS 258
Query: 101 SANNRAACQYS 111
N +ACQY+
Sbjct: 259 ---NLSACQYA 266
>gi|158256614|dbj|BAF84280.1| unnamed protein product [Homo sapiens]
Length = 271
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 40/71 (56%), Gaps = 20/71 (28%)
Query: 41 CPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFNYTSITPPVS 100
CPY PPT PY +R CN SS+ASLRLKAKQHS+F Y S+ P S
Sbjct: 216 CPYAPPTPPY---VYRDT-----------CN---SSLASLRLKAKQHSSFGYASVQNPAS 258
Query: 101 SANNRAACQYS 111
N +ACQY+
Sbjct: 259 ---NLSACQYA 266
>gi|24234711|ref|NP_700476.1| pituitary homeobox 2 isoform a [Homo sapiens]
gi|324710996|ref|NP_001191328.1| pituitary homeobox 2 isoform a [Homo sapiens]
gi|296195753|ref|XP_002745525.1| PREDICTED: pituitary homeobox 2 isoform 3 [Callithrix jacchus]
gi|397519873|ref|XP_003830077.1| PREDICTED: pituitary homeobox 2 isoform 3 [Pan paniscus]
gi|403275546|ref|XP_003929501.1| PREDICTED: pituitary homeobox 2 isoform 1 [Saimiri boliviensis
boliviensis]
gi|426231273|ref|XP_004009664.1| PREDICTED: pituitary homeobox 2 isoform 3 [Ovis aries]
gi|3078007|gb|AAC39716.1| ALL1 responsive protein ARP1a [Homo sapiens]
gi|76780065|gb|AAI06011.1| Paired-like homeodomain 2 [Homo sapiens]
gi|119626669|gb|EAX06264.1| paired-like homeodomain transcription factor 2, isoform CRA_c [Homo
sapiens]
gi|410342055|gb|JAA39974.1| paired-like homeodomain 2 [Pan troglodytes]
Length = 271
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 40/71 (56%), Gaps = 20/71 (28%)
Query: 41 CPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFNYTSITPPVS 100
CPY PPT PY +R CN SS+ASLRLKAKQHS+F Y S+ P S
Sbjct: 216 CPYAPPTPPY---VYRDT-----------CN---SSLASLRLKAKQHSSFGYASVQNPAS 258
Query: 101 SANNRAACQYS 111
N +ACQY+
Sbjct: 259 ---NLSACQYA 266
>gi|348535087|ref|XP_003455033.1| PREDICTED: pituitary homeobox 3-like [Oreochromis niloticus]
Length = 295
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 43/77 (55%), Gaps = 20/77 (25%)
Query: 35 SVAAATCPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFNYTS 94
+V AATCPY +PY MY CN SS+ASLRLKAKQH+NF Y +
Sbjct: 234 AVTAATCPYATTASPY-MYRD-------------TCN---SSLASLRLKAKQHTNFAYPA 276
Query: 95 ITPPVSSANNRAACQYS 111
+ PVS N + CQY+
Sbjct: 277 VQNPVS---NLSPCQYA 290
>gi|327274064|ref|XP_003221798.1| PREDICTED: pituitary homeobox 2-like isoform 1 [Anolis
carolinensis]
Length = 339
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 41/71 (57%), Gaps = 20/71 (28%)
Query: 41 CPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFNYTSITPPVS 100
CPY PPT PY +R CN SS+ASLRLKAKQHS+F Y S+ P
Sbjct: 284 CPYAPPTPPY---VYRDT-----------CN---SSLASLRLKAKQHSSFGYASVQAP-- 324
Query: 101 SANNRAACQYS 111
A+N +ACQY+
Sbjct: 325 -ASNLSACQYA 334
>gi|403275550|ref|XP_003929503.1| PREDICTED: pituitary homeobox 2 isoform 3 [Saimiri boliviensis
boliviensis]
Length = 325
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 41/71 (57%), Gaps = 20/71 (28%)
Query: 41 CPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFNYTSITPPVS 100
CPY PPT PY +R CN SS+ASLRLKAKQHS+F Y S+ P
Sbjct: 270 CPYAPPTPPY---VYRDT-----------CN---SSLASLRLKAKQHSSFGYASVQNP-- 310
Query: 101 SANNRAACQYS 111
A+N +ACQY+
Sbjct: 311 -ASNLSACQYA 320
>gi|395851306|ref|XP_003798203.1| PREDICTED: pituitary homeobox 2 isoform 1 [Otolemur garnettii]
Length = 325
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 41/71 (57%), Gaps = 20/71 (28%)
Query: 41 CPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFNYTSITPPVS 100
CPY PPT PY +R CN SS+ASLRLKAKQHS+F Y S+ P
Sbjct: 270 CPYAPPTPPY---VYRDT-----------CN---SSLASLRLKAKQHSSFGYASVQNP-- 310
Query: 101 SANNRAACQYS 111
A+N +ACQY+
Sbjct: 311 -ASNLSACQYA 320
>gi|332240441|ref|XP_003269394.1| PREDICTED: pituitary homeobox 2 isoform 1 [Nomascus leucogenys]
Length = 325
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 41/71 (57%), Gaps = 20/71 (28%)
Query: 41 CPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFNYTSITPPVS 100
CPY PPT PY +R CN SS+ASLRLKAKQHS+F Y S+ P
Sbjct: 270 CPYAPPTPPY---VYRDT-----------CN---SSLASLRLKAKQHSSFGYASVQNP-- 310
Query: 101 SANNRAACQYS 111
A+N +ACQY+
Sbjct: 311 -ASNLSACQYA 320
>gi|297674178|ref|XP_002815113.1| PREDICTED: pituitary homeobox 2 isoform 3 [Pongo abelii]
Length = 325
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 41/71 (57%), Gaps = 20/71 (28%)
Query: 41 CPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFNYTSITPPVS 100
CPY PPT PY +R CN SS+ASLRLKAKQHS+F Y S+ P
Sbjct: 270 CPYAPPTPPY---VYRDT-----------CN---SSLASLRLKAKQHSSFGYASVQNP-- 310
Query: 101 SANNRAACQYS 111
A+N +ACQY+
Sbjct: 311 -ASNLSACQYA 320
>gi|109075376|ref|XP_001091288.1| PREDICTED: pituitary homeobox 2-like isoform 4 [Macaca mulatta]
gi|402870246|ref|XP_003899146.1| PREDICTED: pituitary homeobox 2 isoform 3 [Papio anubis]
gi|355687543|gb|EHH26127.1| hypothetical protein EGK_16019 [Macaca mulatta]
Length = 325
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 41/71 (57%), Gaps = 20/71 (28%)
Query: 41 CPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFNYTSITPPVS 100
CPY PPT PY +R CN SS+ASLRLKAKQHS+F Y S+ P
Sbjct: 270 CPYAPPTPPY---VYRDT-----------CN---SSLASLRLKAKQHSSFGYASVQNP-- 310
Query: 101 SANNRAACQYS 111
A+N +ACQY+
Sbjct: 311 -ASNLSACQYA 320
>gi|5668951|gb|AAD46097.1|AF077092_1 pituitary homeobox protein 2 [Gallus gallus]
Length = 271
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 41/71 (57%), Gaps = 20/71 (28%)
Query: 41 CPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFNYTSITPPVS 100
CPY PPT PY +R CN SS+ASLRLKAKQHS+F Y S+ P
Sbjct: 216 CPYAPPTPPY---VYRDT-----------CN---SSLASLRLKAKQHSSFGYASVQNP-- 256
Query: 101 SANNRAACQYS 111
A+N +ACQY+
Sbjct: 257 -ASNLSACQYA 266
>gi|147901103|ref|NP_001091460.1| pituitary homeobox 2 [Bos taurus]
gi|426231269|ref|XP_004009662.1| PREDICTED: pituitary homeobox 2 isoform 1 [Ovis aries]
gi|146186826|gb|AAI40580.1| PITX2 protein [Bos taurus]
gi|296486755|tpg|DAA28868.1| TPA: paired-like homeodomain 2 [Bos taurus]
gi|440905673|gb|ELR56024.1| Pituitary homeobox 2 [Bos grunniens mutus]
Length = 325
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 40/71 (56%), Gaps = 20/71 (28%)
Query: 41 CPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFNYTSITPPVS 100
CPY PPT PY +R CN SS+ASLRLKAKQHS+F Y S+ P S
Sbjct: 270 CPYAPPTPPY---VYRDT-----------CN---SSLASLRLKAKQHSSFGYASVQNPAS 312
Query: 101 SANNRAACQYS 111
N +ACQY+
Sbjct: 313 ---NLSACQYA 320
>gi|410957009|ref|XP_003985127.1| PREDICTED: pituitary homeobox 2 isoform 4 [Felis catus]
Length = 271
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 40/71 (56%), Gaps = 20/71 (28%)
Query: 41 CPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFNYTSITPPVS 100
CPY PPT PY +R CN SS+ASLRLKAKQHS+F Y S+ P S
Sbjct: 216 CPYAPPTPPY---VYRDT-----------CN---SSLASLRLKAKQHSSFGYASVQNPAS 258
Query: 101 SANNRAACQYS 111
N +ACQY+
Sbjct: 259 ---NLSACQYA 266
>gi|410957003|ref|XP_003985124.1| PREDICTED: pituitary homeobox 2 isoform 1 [Felis catus]
Length = 325
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 41/71 (57%), Gaps = 20/71 (28%)
Query: 41 CPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFNYTSITPPVS 100
CPY PPT PY +R CN SS+ASLRLKAKQHS+F Y S+ P
Sbjct: 270 CPYAPPTPPY---VYRDT-----------CN---SSLASLRLKAKQHSSFGYASVQNP-- 310
Query: 101 SANNRAACQYS 111
A+N +ACQY+
Sbjct: 311 -ASNLSACQYA 320
>gi|291401270|ref|XP_002717162.1| PREDICTED: paired-like homeodomain 1 isoform 2 [Oryctolagus
cuniculus]
Length = 325
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 40/71 (56%), Gaps = 20/71 (28%)
Query: 41 CPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFNYTSITPPVS 100
CPY PPT PY +R CN SS+ASLRLKAKQHS+F Y S+ P S
Sbjct: 270 CPYAPPTPPY---VYRDT-----------CN---SSLASLRLKAKQHSSFGYASVQNPAS 312
Query: 101 SANNRAACQYS 111
N +ACQY+
Sbjct: 313 ---NLSACQYA 320
>gi|171544943|ref|NP_001116388.1| paired-like homeodomain transcription factor 2a [Oryzias latipes]
gi|157410517|gb|ABV53981.1| paired-like homeodomain transcription factor 2a [Oryzias latipes]
Length = 316
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 40/71 (56%), Gaps = 20/71 (28%)
Query: 41 CPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFNYTSITPPVS 100
CPY PPT PY +R CN SS+ASLRLKAKQHS+F Y S+ P
Sbjct: 261 CPYAPPTPPY---VYRDT-----------CN---SSLASLRLKAKQHSSFGYASVQNP-- 301
Query: 101 SANNRAACQYS 111
A N +ACQY+
Sbjct: 302 -ATNLSACQYA 311
>gi|351711061|gb|EHB13980.1| Pituitary homeobox 2 [Heterocephalus glaber]
Length = 220
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 41/71 (57%), Gaps = 20/71 (28%)
Query: 41 CPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFNYTSITPPVS 100
CPY PPT PY +R CN SS+ASLRLKAKQHS+F Y S+ P
Sbjct: 165 CPYAPPTPPY---VYRDT-----------CN---SSLASLRLKAKQHSSFGYASVQNP-- 205
Query: 101 SANNRAACQYS 111
A+N +ACQY+
Sbjct: 206 -ASNLSACQYA 215
>gi|17380174|sp|Q9PWR3.1|PITX2_XENLA RecName: Full=Pituitary homeobox 2; AltName: Full=Homeobox protein
PITX2; AltName: Full=Paired-like homeodomain
transcription factor 2; AltName: Full=xPtx2
gi|3955069|emb|CAA06696.1| XPtx2a [Xenopus laevis]
Length = 326
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 41/75 (54%), Gaps = 20/75 (26%)
Query: 36 VAAATCPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFNYTSI 95
V + CPY PPT PY +R CN SS+ASLRLKAKQHS+F Y ++
Sbjct: 266 VPTSACPYAPPTPPY---VYRDT-----------CN---SSLASLRLKAKQHSSFGYATV 308
Query: 96 TPPVSSANNRAACQY 110
P S N +ACQY
Sbjct: 309 QTPGS---NLSACQY 320
>gi|4959546|gb|AAD34391.1|AF132447_1 transcription factor Pitx2 isoform a [Danio rerio]
gi|5107931|gb|AAD40180.1|AF156906_1 transcription factor Pitx2a [Danio rerio]
gi|6016473|gb|AAF00486.2|AF181681_1 transcription factor Pitx2 [Danio rerio]
Length = 269
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 40/71 (56%), Gaps = 20/71 (28%)
Query: 41 CPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFNYTSITPPVS 100
CPY PPT PY +R CN SS+ASLRLKAKQHS+F Y S+ P S
Sbjct: 214 CPYAPPTPPY---VYRDT-----------CN---SSLASLRLKAKQHSSFGYASVQNPAS 256
Query: 101 SANNRAACQYS 111
N +ACQY+
Sbjct: 257 ---NLSACQYA 264
>gi|148234542|ref|NP_001081756.1| paired-like homeodomain 2 [Xenopus laevis]
gi|3406613|gb|AAC29426.1| homeodomain transcription factor Pitx2 [Xenopus laevis]
Length = 326
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 41/75 (54%), Gaps = 20/75 (26%)
Query: 36 VAAATCPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFNYTSI 95
V + CPY PPT PY +R CN SS+ASLRLKAKQHS+F Y ++
Sbjct: 266 VPTSACPYAPPTPPY---VYRDT-----------CN---SSLASLRLKAKQHSSFGYATV 308
Query: 96 TPPVSSANNRAACQY 110
P S N +ACQY
Sbjct: 309 QTPGS---NLSACQY 320
>gi|344277314|ref|XP_003410447.1| PREDICTED: LOW QUALITY PROTEIN: pituitary homeobox 2-like
[Loxodonta africana]
Length = 326
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 41/71 (57%), Gaps = 20/71 (28%)
Query: 41 CPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFNYTSITPPVS 100
CPY PPT PY +Y CN SS+ASLRLKAKQHS+F Y S+ P
Sbjct: 271 CPYAPPTPPY-VYRD-------------TCN---SSLASLRLKAKQHSSFGYASVQNP-- 311
Query: 101 SANNRAACQYS 111
A+N +ACQY+
Sbjct: 312 -ASNLSACQYA 321
>gi|348511922|ref|XP_003443492.1| PREDICTED: pituitary homeobox 2-like isoform 2 [Oreochromis
niloticus]
Length = 267
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 40/71 (56%), Gaps = 20/71 (28%)
Query: 41 CPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFNYTSITPPVS 100
CPY PPT PY +R CN SS+ASLRLKAKQHS+F Y S+ P
Sbjct: 212 CPYAPPTPPY---VYRDT-----------CN---SSLASLRLKAKQHSSFGYASVQNP-- 252
Query: 101 SANNRAACQYS 111
A N +ACQY+
Sbjct: 253 -ATNLSACQYA 262
>gi|242017518|ref|XP_002429235.1| Pituitary homeobox, putative [Pediculus humanus corporis]
gi|212514124|gb|EEB16497.1| Pituitary homeobox, putative [Pediculus humanus corporis]
Length = 302
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 44/73 (60%), Gaps = 12/73 (16%)
Query: 41 CPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFNYTSITPPVS 100
CPY PPT PYSMY R ++ P+ + M++SIASLRLKAKQHS + PV+
Sbjct: 232 CPYGPPTNPYSMY--RASADLPN-------HAMTTSIASLRLKAKQHSVSSSFGTYSPVT 282
Query: 101 ---SANNRAACQY 110
S+ +ACQY
Sbjct: 283 TRPSSTGLSACQY 295
>gi|395542232|ref|XP_003773037.1| PREDICTED: pituitary homeobox 2 isoform 1 [Sarcophilus harrisii]
Length = 317
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 42/71 (59%), Gaps = 20/71 (28%)
Query: 41 CPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFNYTSITPPVS 100
CPY PPT PY +R CN SS+ASLRLKAKQHS+F Y S+ +
Sbjct: 262 CPYAPPTPPY---VYRDT-----------CN---SSLASLRLKAKQHSSFGYASVQ---N 301
Query: 101 SANNRAACQYS 111
+A+N +ACQY+
Sbjct: 302 TASNLSACQYA 312
>gi|410932191|ref|XP_003979477.1| PREDICTED: pituitary homeobox 3-like, partial [Takifugu rubripes]
Length = 188
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 43/77 (55%), Gaps = 20/77 (25%)
Query: 35 SVAAATCPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFNYTS 94
+V AATCPY +PY MY CN SS+ASLRLKAKQH+NF Y +
Sbjct: 127 AVTAATCPYATSASPY-MYRD-------------TCN---SSLASLRLKAKQHANFPYPA 169
Query: 95 ITPPVSSANNRAACQYS 111
+ PVS N + CQY+
Sbjct: 170 VQNPVS---NLSPCQYA 183
>gi|1498310|gb|AAC52716.1| POTX [Mus musculus]
Length = 315
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 42/80 (52%), Gaps = 19/80 (23%)
Query: 32 LDGSVAAATCPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFN 91
L+ +++ CPY P +PYS+Y CN SS+ASL LK+KQHS+F
Sbjct: 254 LNSAMSPGACPYGTPASPYSVYRD-------------TCN---SSLASLALKSKQHSSFG 297
Query: 92 YTSITPPVSSANNRAACQYS 111
Y + P S N ACQY+
Sbjct: 298 YGGLQGPASGLN---ACQYN 314
>gi|395542234|ref|XP_003773038.1| PREDICTED: pituitary homeobox 2 isoform 2 [Sarcophilus harrisii]
Length = 330
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 42/71 (59%), Gaps = 20/71 (28%)
Query: 41 CPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFNYTSITPPVS 100
CPY PPT PY +R CN SS+ASLRLKAKQHS+F Y S+ +
Sbjct: 275 CPYAPPTPPY---VYRDT-----------CN---SSLASLRLKAKQHSSFGYASVQ---N 314
Query: 101 SANNRAACQYS 111
+A+N +ACQY+
Sbjct: 315 TASNLSACQYA 325
>gi|210049953|dbj|BAG80694.1| homeodomain transcription factor Pitx2 [Neoceratodus forsteri]
Length = 202
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 44/77 (57%), Gaps = 20/77 (25%)
Query: 35 SVAAATCPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFNYTS 94
+V + CPY PPT PY +R CN SS+ASLRLKAKQHS+F Y +
Sbjct: 141 AVPTSACPYGPPTPPY---VYRDT-----------CN---SSLASLRLKAKQHSSFGYAT 183
Query: 95 ITPPVSSANNRAACQYS 111
+ P A+N +ACQY+
Sbjct: 184 VQNP---ASNLSACQYA 197
>gi|301612605|ref|XP_002935807.1| PREDICTED: pituitary homeobox 3-like [Xenopus (Silurana)
tropicalis]
Length = 292
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 44/79 (55%), Gaps = 20/79 (25%)
Query: 32 LDGSVAAATCPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFN 91
L+ +V+A+ CPY +PY MY CN SS+ASLRLKAKQH+NF
Sbjct: 228 LNSAVSASACPYASTASPY-MYRD-------------TCN---SSLASLRLKAKQHANFT 270
Query: 92 YTSITPPVSSANNRAACQY 110
Y ++ P A+N + CQY
Sbjct: 271 YPAVQTP---ASNLSPCQY 286
>gi|148238060|ref|NP_001082023.1| paired-like homeodomain 3 [Xenopus laevis]
gi|10242336|gb|AAG15383.1|AF297713_1 homeodomain transcription factor Pitx-3 [Xenopus laevis]
gi|213623914|gb|AAI70394.1| Pitx3 protein [Xenopus laevis]
gi|213625259|gb|AAI70198.1| Paired-like homeodomain transcription factor 3 [Xenopus laevis]
gi|213625342|gb|AAI70392.1| Paired-like homeodomain transcription factor 3 [Xenopus laevis]
gi|213626819|gb|AAI70172.1| Paired-like homeodomain transcription factor 3 [Xenopus laevis]
Length = 292
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 43/79 (54%), Gaps = 20/79 (25%)
Query: 32 LDGSVAAATCPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFN 91
L+ +V+A+ CPY +PY MY CN SS+ASLRLKAKQH+NF
Sbjct: 228 LNSAVSASACPYASTASPY-MYRD-------------TCN---SSLASLRLKAKQHANFT 270
Query: 92 YTSITPPVSSANNRAACQY 110
Y ++ P S N + CQY
Sbjct: 271 YPAVQTPAS---NLSPCQY 286
>gi|42491336|dbj|BAD10985.1| paired-like homeodomain transcription factor [Cairina moschata]
Length = 112
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 40/66 (60%), Gaps = 16/66 (24%)
Query: 30 AELDGSVAAATCPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSN 89
+ L+ ++++ CPY PP +PYS+Y CN SS+ASLRLK+KQHS+
Sbjct: 63 SSLNSAMSSPACPYGPPGSPYSVYRD-------------TCN---SSLASLRLKSKQHSS 106
Query: 90 FNYTSI 95
F Y+S+
Sbjct: 107 FGYSSL 112
>gi|354504453|ref|XP_003514290.1| PREDICTED: pituitary homeobox 2-like isoform 3 [Cricetulus griseus]
Length = 302
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 40/71 (56%), Gaps = 22/71 (30%)
Query: 41 CPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFNYTSITPPVS 100
CPY PPT PY +R CN SS+ASLRLKAKQHS+F Y S+
Sbjct: 249 CPYAPPTPPY---VYRDT-----------CN---SSLASLRLKAKQHSSFGYASVP---- 287
Query: 101 SANNRAACQYS 111
A+N +ACQY+
Sbjct: 288 -ASNLSACQYA 297
>gi|354504451|ref|XP_003514289.1| PREDICTED: pituitary homeobox 2-like isoform 2 [Cricetulus griseus]
Length = 315
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 40/71 (56%), Gaps = 22/71 (30%)
Query: 41 CPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFNYTSITPPVS 100
CPY PPT PY +R CN SS+ASLRLKAKQHS+F Y S+
Sbjct: 262 CPYAPPTPPY---VYRDT-----------CN---SSLASLRLKAKQHSSFGYASVP---- 300
Query: 101 SANNRAACQYS 111
A+N +ACQY+
Sbjct: 301 -ASNLSACQYA 310
>gi|42491338|dbj|BAD10986.1| paired-like homeodomain transcription factor [Anas platyrhynchos]
Length = 112
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 51/96 (53%), Gaps = 22/96 (22%)
Query: 2 LPTGMTAPLTGSASPAGRRSAL--LMCLWVAELDGSVAAATCPYVPPTTPYSMYTHRPAS 59
+P+GM SA P S L + + + L+ ++++ CPY PP +PYS+Y
Sbjct: 37 MPSGMGH----SAVPGMANSGLNNINNISGSSLNSAMSSPACPYGPPGSPYSVYRD---- 88
Query: 60 SDPSLSRVAECNVMSSSIASLRLKAKQHSNFNYTSI 95
CN SS+AS RLK+KQHS+F Y+S+
Sbjct: 89 ---------TCN---SSLASFRLKSKQHSSFGYSSL 112
>gi|49660016|gb|AAT68296.1| Pitx3 [Danio rerio]
Length = 293
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 42/77 (54%), Gaps = 20/77 (25%)
Query: 35 SVAAATCPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFNYTS 94
+V+AA CPY PY MY CN SS+ASLRLKAKQH+NF Y +
Sbjct: 232 AVSAAACPYATTAGPY-MYRD-------------TCN---SSLASLRLKAKQHANFAYPA 274
Query: 95 ITPPVSSANNRAACQYS 111
+ PVS N + CQY+
Sbjct: 275 VQNPVS---NLSPCQYA 288
>gi|354504449|ref|XP_003514288.1| PREDICTED: pituitary homeobox 2-like isoform 1 [Cricetulus griseus]
gi|344255585|gb|EGW11689.1| Pituitary homeobox 2 [Cricetulus griseus]
Length = 322
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 40/71 (56%), Gaps = 22/71 (30%)
Query: 41 CPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFNYTSITPPVS 100
CPY PPT PY +R CN SS+ASLRLKAKQHS+F Y S+
Sbjct: 269 CPYAPPTPPY---VYRDT-----------CN---SSLASLRLKAKQHSSFGYASVP---- 307
Query: 101 SANNRAACQYS 111
A+N +ACQY+
Sbjct: 308 -ASNLSACQYA 317
>gi|45387769|ref|NP_991238.1| pituitary homeobox 3 [Danio rerio]
gi|82237957|sp|Q6QU75.1|PITX3_DANRE RecName: Full=Pituitary homeobox 3; AltName: Full=Bicoid-like
homeodomain transcription factor Pitx3; AltName:
Full=Homeobox protein PITX3; AltName: Full=Paired-like
homeodomain transcription factor 3
gi|41059121|gb|AAR98874.1| paired-like homeodomain transcription factor 3 [Danio rerio]
gi|50254062|gb|AAT72155.1| bicoid-like homeodomain transcription factor Pitx3 [Danio rerio]
gi|63101378|gb|AAH94961.1| Paired-like homeodomain transcription factor 3 [Danio rerio]
gi|182889542|gb|AAI65321.1| Pitx3 protein [Danio rerio]
Length = 293
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 42/77 (54%), Gaps = 20/77 (25%)
Query: 35 SVAAATCPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFNYTS 94
+V+AA CPY PY MY CN SS+ASLRLKAKQH+NF Y +
Sbjct: 232 AVSAAACPYATTAGPY-MYRD-------------TCN---SSLASLRLKAKQHANFAYPA 274
Query: 95 ITPPVSSANNRAACQYS 111
+ PVS N + CQY+
Sbjct: 275 VQNPVS---NLSPCQYA 288
>gi|354504455|ref|XP_003514291.1| PREDICTED: pituitary homeobox 2-like isoform 4 [Cricetulus griseus]
Length = 269
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 40/71 (56%), Gaps = 22/71 (30%)
Query: 41 CPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFNYTSITPPVS 100
CPY PPT PY +R CN SS+ASLRLKAKQHS+F Y S+
Sbjct: 216 CPYAPPTPPY---VYRDT-----------CN---SSLASLRLKAKQHSSFGYASV----- 253
Query: 101 SANNRAACQYS 111
A+N +ACQY+
Sbjct: 254 PASNLSACQYA 264
>gi|185132179|ref|NP_001117151.1| paired-like homeodomain transcription factor 3beta [Salmo salar]
gi|158380245|gb|ABW37419.1| paired-like homeodomain transcription factor 3beta [Salmo salar]
Length = 293
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 40/75 (53%), Gaps = 20/75 (26%)
Query: 36 VAAATCPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFNYTSI 95
V AATCPY +PY MY CN SS+ASLRLKAKQH+NF Y ++
Sbjct: 233 VTAATCPYASTASPY-MYRD-------------TCN---SSLASLRLKAKQHANFAYPAV 275
Query: 96 TPPVSSANNRAACQY 110
VS N + CQY
Sbjct: 276 QSTVS---NLSPCQY 287
>gi|148232934|ref|NP_001079212.1| pituitary homeobox 3 [Xenopus laevis]
gi|18203019|sp|Q9I8K3.1|PITX3_XENLA RecName: Full=Pituitary homeobox 3; AltName: Full=Homeobox protein
PITX3; Short=XPitx-3; Short=xPitx3; AltName:
Full=Paired-like homeodomain transcription factor 3
gi|9716650|gb|AAF97592.1|AF265671_1 paired-like homeodomain transcription factor Pitx3 [Xenopus laevis]
Length = 292
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 43/79 (54%), Gaps = 20/79 (25%)
Query: 32 LDGSVAAATCPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFN 91
L +V+A+ CPY +PY MY CN SS+ASLRLKAKQH+NF
Sbjct: 228 LTSAVSASACPYASTASPY-MYRD-------------TCN---SSLASLRLKAKQHANFT 270
Query: 92 YTSITPPVSSANNRAACQY 110
Y ++ P A+N + CQY
Sbjct: 271 YPAVQTP---ASNLSPCQY 286
>gi|110748620|gb|ABG89863.1| Pitx2 splice variant a [Astyanax mexicanus]
Length = 260
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 42/75 (56%), Gaps = 21/75 (28%)
Query: 37 AAATCPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFNYTSIT 96
+A CPY PPT PY +Y CN SS+ASLRLKAKQHS+F+Y +
Sbjct: 202 SAPACPYAPPTPPY-VYRD-------------TCN---SSLASLRLKAKQHSSFSYAGVQ 244
Query: 97 PPVSSANNRAACQYS 111
P +N +ACQY+
Sbjct: 245 TP----SNLSACQYA 255
>gi|148298661|ref|NP_001091838.1| pituitary homeobox1 [Bombyx mori]
gi|121582239|dbj|BAF44479.1| pituitary homeobox1 [Bombyx mori]
Length = 387
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 37/75 (49%), Gaps = 16/75 (21%)
Query: 41 CPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQH--SNFNYTSITPP 98
CPY P PYSMY R C MSSSIASLRLKAKQH P
Sbjct: 315 CPYTAPPNPYSMY------------RTEPCPAMSSSIASLRLKAKQHSSGFGGSYGSVSP 362
Query: 99 VSSANNR--AACQYS 111
VS A + +ACQY+
Sbjct: 363 VSRAGSAPLSACQYA 377
>gi|357615722|gb|EHJ69804.1| pituitary homeobox1 [Danaus plexippus]
Length = 377
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 37/74 (50%), Gaps = 16/74 (21%)
Query: 41 CPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQH--SNFNYTSITPP 98
CPY P PYSMY R C MSSSIASLRLKAKQH + P
Sbjct: 310 CPYTAPPNPYSMY------------RAEPCPAMSSSIASLRLKAKQHSSGFSSGYGGVSP 357
Query: 99 VSSANN--RAACQY 110
VS A + +ACQY
Sbjct: 358 VSRAGSAPLSACQY 371
>gi|13928402|dbj|BAB46932.1| paired-like homeodomain transcription factor PTX1 [Coturnix
japonica]
Length = 109
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 49/93 (52%), Gaps = 22/93 (23%)
Query: 2 LPTGMTAPLTGSASPAGRRSAL--LMCLWVAELDGSVAAATCPYVPPTTPYSMYTHRPAS 59
+P+GM SA P S L + + + L+ ++++ CPY PP +PYS+Y
Sbjct: 37 MPSGMGH----SAVPGMANSGLNNINNISGSSLNSAMSSPACPYGPPGSPYSVYRD---- 88
Query: 60 SDPSLSRVAECNVMSSSIASLRLKAKQHSNFNY 92
CN SS+ASLRLK+KQHS+F Y
Sbjct: 89 ---------TCN---SSLASLRLKSKQHSSFGY 109
>gi|185132152|ref|NP_001117150.1| paired-like homeodomain transcription factor 3alpha [Salmo salar]
gi|158380243|gb|ABW37418.1| paired-like homeodomain transcription factor 3alpha [Salmo salar]
Length = 293
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 40/75 (53%), Gaps = 20/75 (26%)
Query: 36 VAAATCPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFNYTSI 95
V A+TCPY +PY MY CN SS+ASLRLKAKQH+NF Y ++
Sbjct: 233 VTASTCPYATTASPY-MYRD-------------TCN---SSLASLRLKAKQHANFAYPTV 275
Query: 96 TPPVSSANNRAACQY 110
VS N + CQY
Sbjct: 276 QNTVS---NLSPCQY 287
>gi|326923546|ref|XP_003207996.1| PREDICTED: pituitary homeobox 3-like [Meleagris gallopavo]
gi|449269113|gb|EMC79919.1| Pituitary homeobox 3 [Columba livia]
Length = 292
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 45/79 (56%), Gaps = 20/79 (25%)
Query: 32 LDGSVAAATCPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFN 91
L+ +V+++ CPY +PY MY CN SS+ASLRLKAKQH+NF
Sbjct: 228 LNSAVSSSACPYASTASPY-MYRD-------------TCN---SSLASLRLKAKQHANFT 270
Query: 92 YTSITPPVSSANNRAACQY 110
Y ++ ++A+N + CQY
Sbjct: 271 YPAVQ---TAASNLSPCQY 286
>gi|118092700|ref|XP_421631.2| PREDICTED: pituitary homeobox 3-like [Gallus gallus]
Length = 292
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 45/79 (56%), Gaps = 20/79 (25%)
Query: 32 LDGSVAAATCPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFN 91
L+ +V+++ CPY +PY MY CN SS+ASLRLKAKQH+NF
Sbjct: 228 LNSAVSSSACPYASTASPY-MYRD-------------TCN---SSLASLRLKAKQHANFT 270
Query: 92 YTSITPPVSSANNRAACQY 110
Y ++ ++A+N + CQY
Sbjct: 271 YPAVQ---TAASNLSPCQY 286
>gi|224052452|ref|XP_002197829.1| PREDICTED: pituitary homeobox 3 [Taeniopygia guttata]
Length = 292
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 45/79 (56%), Gaps = 20/79 (25%)
Query: 32 LDGSVAAATCPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFN 91
L+ +V+++ CPY +PY MY CN SS+ASLRLKAKQH+NF
Sbjct: 228 LNSAVSSSACPYASTASPY-MYRD-------------TCN---SSLASLRLKAKQHANFT 270
Query: 92 YTSITPPVSSANNRAACQY 110
Y ++ ++A+N + CQY
Sbjct: 271 YPAVQ---TAASNLSPCQY 286
>gi|147898431|ref|NP_001079055.1| paired-like homeodomain 2 [Xenopus laevis]
gi|3955071|emb|CAA06697.1| XPtx2b [Xenopus laevis]
Length = 316
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 42/77 (54%), Gaps = 22/77 (28%)
Query: 35 SVAAATCPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFNYTS 94
+V + CPY PPT PY +R CN SS+ASLRLKAKQHS+F Y
Sbjct: 257 AVPTSACPYAPPTPPY---VYRDT-----------CN---SSLASLRLKAKQHSSFGY-- 297
Query: 95 ITPPVSSANNRAACQYS 111
+ P S N +ACQY+
Sbjct: 298 VQNPGS---NLSACQYA 311
>gi|403256605|ref|XP_003920957.1| PREDICTED: uncharacterized protein LOC101038269 [Saimiri
boliviensis boliviensis]
Length = 586
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 36/67 (53%), Gaps = 16/67 (23%)
Query: 32 LDGSVAAATCPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFN 91
L+ +++ CPY P +PYS+Y CN SS+ASLRLK+KQHS+F
Sbjct: 316 LNSAMSPGACPYGTPASPYSVYRD-------------TCN---SSLASLRLKSKQHSSFG 359
Query: 92 YTSITPP 98
Y + P
Sbjct: 360 YGGLQGP 366
>gi|49115583|gb|AAH73479.1| Pitx2-A protein [Xenopus laevis]
Length = 323
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 40/75 (53%), Gaps = 22/75 (29%)
Query: 36 VAAATCPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFNYTSI 95
V + CPY PPT PY +R CN SS+ASLRLKAKQHS+F Y +
Sbjct: 265 VPTSACPYAPPTPPY---VYRDT-----------CN---SSLASLRLKAKQHSSFGY--V 305
Query: 96 TPPVSSANNRAACQY 110
P S N +ACQY
Sbjct: 306 QNPGS---NLSACQY 317
>gi|50363053|gb|AAT75269.1| pituitary homeobox transcription factor [Botryllus schlosseri]
Length = 233
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 47/81 (58%), Gaps = 19/81 (23%)
Query: 37 AAATCPYVPPT-TPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNF-NYTS 94
AA++ P+ P + PY+MY R DP CN SSIASLRLKAKQHS++ NY +
Sbjct: 170 AASSNPHYPASANPYNMY--RSGGPDP-------CN---SSIASLRLKAKQHSDYMNYPA 217
Query: 95 ITPPVSSANNRAACQYSDESV 115
+ P ACQYS +++
Sbjct: 218 VLDPTF-----PACQYSAKNL 233
>gi|330340407|ref|NP_001193364.1| pituitary homeobox 2 [Sus scrofa]
gi|292806711|gb|ADE42485.1| paired-like homeodomain transcription factor 2c [Sus scrofa]
Length = 326
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/42 (59%), Positives = 31/42 (73%), Gaps = 6/42 (14%)
Query: 70 CNVMSSSIASLRLKAKQHSNFNYTSITPPVSSANNRAACQYS 111
CN SS+ASLRLKAKQHS+F Y S+ P A+N +ACQY+
Sbjct: 286 CN---SSLASLRLKAKQHSSFGYASVQNP---ASNLSACQYA 321
>gi|156550319|ref|XP_001603592.1| PREDICTED: pituitary homeobox homolog Ptx1-like [Nasonia
vitripennis]
Length = 531
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 32/56 (57%), Gaps = 10/56 (17%)
Query: 37 AAATCPYVPPTTPYS-----MYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQH 87
+ A CPY P P+ +Y+H + P S NVMS+SIASLRLKAKQH
Sbjct: 397 SGAACPYTAPAAPHHPYGPPVYSHHRTAVGPETS-----NVMSTSIASLRLKAKQH 447
>gi|327276787|ref|XP_003223149.1| PREDICTED: pituitary homeobox 3-like [Anolis carolinensis]
Length = 286
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 42/79 (53%), Gaps = 20/79 (25%)
Query: 32 LDGSVAAATCPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFN 91
L +V+++TCPY +PY MY CN SS+ASLRLKAKQH+NF
Sbjct: 222 LSSAVSSSTCPYASSASPY-MYRD-------------TCN---SSLASLRLKAKQHANFT 264
Query: 92 YTSITPPVSSANNRAACQY 110
Y ++ SS + CQY
Sbjct: 265 YPAVQTASSSL---SPCQY 280
>gi|157117543|ref|XP_001658818.1| homeobox protein [Aedes aegypti]
gi|108876010|gb|EAT40235.1| AAEL008022-PA [Aedes aegypti]
Length = 482
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 41/65 (63%), Gaps = 12/65 (18%)
Query: 50 YSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQH-SNFNYTSITP-PVSSANNRA- 106
YSMY HR A+++P C M+SSIA+LRLKAKQH S F+ P PVS +N+
Sbjct: 419 YSMYHHR-ATAEP-------CTAMTSSIATLRLKAKQHTSGFSSPYSAPSPVSRSNSAGL 470
Query: 107 -ACQY 110
ACQY
Sbjct: 471 SACQY 475
>gi|3171092|gb|AAC18346.1| pituitary homeobox 2 [Gallus gallus]
Length = 150
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 34/64 (53%), Gaps = 17/64 (26%)
Query: 35 SVAAATCPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFNYTS 94
+V CPY PPT PY +R CN SS+ASLRLKAKQHS+F Y S
Sbjct: 103 AVPTPACPYAPPTPPY---VYR-----------DMCN---SSLASLRLKAKQHSSFGYAS 145
Query: 95 ITPP 98
+ P
Sbjct: 146 VQKP 149
>gi|193624928|ref|XP_001949221.1| PREDICTED: pituitary homeobox homolog Ptx1-like isoform 1
[Acyrthosiphon pisum]
gi|328705300|ref|XP_003242759.1| PREDICTED: pituitary homeobox homolog Ptx1-like isoform 2
[Acyrthosiphon pisum]
gi|328705302|ref|XP_003242760.1| PREDICTED: pituitary homeobox homolog Ptx1-like isoform 3
[Acyrthosiphon pisum]
Length = 429
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 28/38 (73%), Gaps = 9/38 (23%)
Query: 51 SMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHS 88
S+Y HRPA +P CNVMSSSIASLRLKAKQH+
Sbjct: 339 SVYHHRPA--EP-------CNVMSSSIASLRLKAKQHA 367
>gi|22531353|emb|CAD30206.1| paired superclass homeobox transcription factor [Petromyzon
marinus]
Length = 263
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 42/80 (52%), Gaps = 20/80 (25%)
Query: 35 SVAAATCPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFNY-T 93
S A TCPY P P + Y +R CN SS+ASLRLKAKQHS F Y
Sbjct: 200 SSAGPTCPYGGP--PAAAYMYRDT-----------CN---SSLASLRLKAKQHSGFGYPA 243
Query: 94 SITPPVSSANNRAACQYSDE 113
+ PP ++ +ACQY+ E
Sbjct: 244 GVQPPPAAL---SACQYAME 260
>gi|126273196|ref|XP_001369387.1| PREDICTED: pituitary homeobox 3-like [Monodelphis domestica]
Length = 305
Score = 43.5 bits (101), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 24/44 (54%), Positives = 33/44 (75%), Gaps = 4/44 (9%)
Query: 70 CNVMSSSIASLRLKAKQHSNFNYTSITPPVSSANNRAACQYSDE 113
CN SS+ASLRLKAKQH++F+YT++ P +A N + CQY+ E
Sbjct: 263 CN---SSLASLRLKAKQHASFSYTAVPGPAPAA-NLSPCQYAVE 302
>gi|432117751|gb|ELK37904.1| Pituitary homeobox 1 [Myotis davidii]
Length = 661
Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 34/61 (55%), Gaps = 16/61 (26%)
Query: 32 LDGSVAAATCPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFN 91
L+ +++ CPY P +PYS+Y CN SS+ASLRLK+KQHS+F
Sbjct: 322 LNSAMSPGACPYGTPASPYSVYRD-------------TCN---SSLASLRLKSKQHSSFG 365
Query: 92 Y 92
Y
Sbjct: 366 Y 366
>gi|374533822|gb|AEZ53824.1| paired-like homeodomain 2, partial [Spea bombifrons]
Length = 250
Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 31/55 (56%), Gaps = 17/55 (30%)
Query: 41 CPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFNYTSI 95
CPY PPT PY +R CN SS+ASLRLKAKQHS+F Y S+
Sbjct: 213 CPYAPPTPPY---VYRDT-----------CN---SSLASLRLKAKQHSSFGYASV 250
>gi|110826332|gb|ABH01135.1| Pitx1 splice variant a [Gasterosteus aculeatus]
gi|110826336|gb|ABH01137.1| Pitx1 splice variant a [Gasterosteus aculeatus]
gi|262091683|gb|ACY25276.1| pituitary homeobox 1 variant a [Gasterosteus aculeatus]
Length = 300
Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 41/88 (46%), Gaps = 24/88 (27%)
Query: 24 LMCLWVAELDGSVAAATCPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLK 83
L + + ++ ++ + CPY PP +PYS+Y +LRLK
Sbjct: 236 LNGIGASGINSGMSPSACPYGPPGSPYSVYR---------------------DTCTLRLK 274
Query: 84 AKQHSNFNYTSITPPVSSANNRAACQYS 111
+KQH +F Y + P +S N ACQY+
Sbjct: 275 SKQHPSFGYGGLQGPGTSLN---ACQYN 299
>gi|46393908|gb|AAS91492.1| transcription factor [Gasterosteus aculeatus]
gi|262091684|gb|ACY25277.1| pituitary homeobox 1 variant b [Gasterosteus aculeatus]
Length = 283
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 41/88 (46%), Gaps = 24/88 (27%)
Query: 24 LMCLWVAELDGSVAAATCPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLK 83
L + + ++ ++ + CPY PP +PYS+Y +LRLK
Sbjct: 219 LNGIGASGINSGMSPSACPYGPPGSPYSVYR---------------------DTCTLRLK 257
Query: 84 AKQHSNFNYTSITPPVSSANNRAACQYS 111
+KQH +F Y + P +S N ACQY+
Sbjct: 258 SKQHPSFGYGGLQGPGTSLN---ACQYN 282
>gi|110826324|gb|ABH01131.1| Pitx1 splice variant a [Pungitius pungitius]
gi|110826328|gb|ABH01133.1| Pitx1 splice variant a [Pungitius pungitius]
Length = 324
Score = 43.1 bits (100), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 40/88 (45%), Gaps = 24/88 (27%)
Query: 24 LMCLWVAELDGSVAAATCPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLK 83
L + + ++ ++ + CPY PP +PYS+Y +LRLK
Sbjct: 260 LNGIGASGINSGMSPSACPYGPPGSPYSVYR---------------------DTCTLRLK 298
Query: 84 AKQHSNFNYTSITPPVSSANNRAACQYS 111
+KQH F Y + P +S N ACQY+
Sbjct: 299 SKQHPTFGYGGLQSPGTSLN---ACQYN 323
>gi|62869861|gb|AAY18081.1| Pitx2 [Hippoglossus hippoglossus]
Length = 283
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 31/57 (54%), Gaps = 17/57 (29%)
Query: 36 VAAATCPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFNY 92
V TCPY PPT PY +R CN SS+ASLRLKAKQHS+F Y
Sbjct: 234 VPTPTCPYAPPTPPY---VYRDT-----------CN---SSLASLRLKAKQHSSFGY 273
>gi|242046476|ref|XP_002399444.1| Pituitary homeobox, putative [Ixodes scapularis]
gi|215497544|gb|EEC07038.1| Pituitary homeobox, putative [Ixodes scapularis]
Length = 174
Score = 43.1 bits (100), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 40/82 (48%), Gaps = 17/82 (20%)
Query: 35 SVAAATCPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFNYTS 94
S A CPY +PY V MSSSIASLRLKAKQH+ ++ +
Sbjct: 110 SAAGPPCPYAASASPY----------------VYRDQSMSSSIASLRLKAKQHAASSFNT 153
Query: 95 ITPPVSSANNRAACQYSDESVT 116
+PP A+ + CQY+D +
Sbjct: 154 YSPP-RQASALSPCQYADRTTV 174
>gi|347963348|ref|XP_310944.5| AGAP000190-PA [Anopheles gambiae str. PEST]
gi|333467242|gb|EAA06466.6| AGAP000190-PA [Anopheles gambiae str. PEST]
Length = 493
Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 59/114 (51%), Gaps = 30/114 (26%)
Query: 1 MLPTGMTAPLTGSASPAGRRSALLMCLWVAELDGSVAAATCPYVPPTTPYSMYTHRPASS 60
MLP M LTG++ G V+ CPY PT PY MY HR A++
Sbjct: 399 MLPASMGTGLTGTSGATG-----------------VSPTPCPYTTPTNPY-MYHHR-AAA 439
Query: 61 DPSLSRVAECNVMSSSIASLRLKAKQH-SNFNY-TSITPPVSSANNRA--ACQY 110
+P C MSSSIA+LRLKAKQH S F+ S + PVS +N+ ACQY
Sbjct: 440 EP-------CTAMSSSIATLRLKAKQHTSGFSSPYSASSPVSRSNSAGLSACQY 486
>gi|110826326|gb|ABH01132.1| Pitx1 splice variant b [Pungitius pungitius]
gi|110826330|gb|ABH01134.1| Pitx1 splice variant b [Pungitius pungitius]
Length = 276
Score = 42.7 bits (99), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 40/88 (45%), Gaps = 24/88 (27%)
Query: 24 LMCLWVAELDGSVAAATCPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLK 83
L + + ++ ++ + CPY PP +PYS+Y +LRLK
Sbjct: 212 LNGIGASGINSGMSPSACPYGPPGSPYSVYR---------------------DTCTLRLK 250
Query: 84 AKQHSNFNYTSITPPVSSANNRAACQYS 111
+KQH F Y + P +S N ACQY+
Sbjct: 251 SKQHPTFGYGGLQSPGTSLN---ACQYN 275
>gi|390407701|ref|NP_001254576.1| pituitary homeobox 1 [Gasterosteus aculeatus]
gi|110826334|gb|ABH01136.1| Pitx1 splice variant b [Gasterosteus aculeatus]
gi|110826338|gb|ABH01138.1| Pitx1 splice variant b [Gasterosteus aculeatus]
Length = 253
Score = 42.7 bits (99), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 38/80 (47%), Gaps = 24/80 (30%)
Query: 32 LDGSVAAATCPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFN 91
++ ++ + CPY PP +PYS+Y +LRLK+KQH +F
Sbjct: 197 INSGMSPSACPYGPPGSPYSVY---------------------RDTCTLRLKSKQHPSFG 235
Query: 92 YTSITPPVSSANNRAACQYS 111
Y + P +S N ACQY+
Sbjct: 236 YGGLQGPGTSLN---ACQYN 252
>gi|431895492|gb|ELK05008.1| Pituitary homeobox 3 [Pteropus alecto]
Length = 302
Score = 42.0 bits (97), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 32/44 (72%), Gaps = 4/44 (9%)
Query: 70 CNVMSSSIASLRLKAKQHSNFNYTSITPPVSSANNRAACQYSDE 113
CN SS+ASLRLKAKQH++F+Y ++ P +A N + CQY+ E
Sbjct: 260 CN---SSLASLRLKAKQHASFSYPTVPGPTPAA-NLSPCQYAVE 299
>gi|390473313|ref|XP_002756598.2| PREDICTED: LOW QUALITY PROTEIN: pituitary homeobox 3 [Callithrix
jacchus]
Length = 370
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 32/44 (72%), Gaps = 4/44 (9%)
Query: 70 CNVMSSSIASLRLKAKQHSNFNYTSITPPVSSANNRAACQYSDE 113
CN SS+ASLRLKAKQH++F+Y ++ P +A N + CQY+ E
Sbjct: 328 CN---SSLASLRLKAKQHASFSYPAVHGPPPAA-NLSPCQYAVE 367
>gi|119570094|gb|EAW49709.1| paired-like homeodomain transcription factor 3, isoform CRA_a [Homo
sapiens]
gi|119570095|gb|EAW49710.1| paired-like homeodomain transcription factor 3, isoform CRA_a [Homo
sapiens]
Length = 186
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 32/44 (72%), Gaps = 4/44 (9%)
Query: 70 CNVMSSSIASLRLKAKQHSNFNYTSITPPVSSANNRAACQYSDE 113
CN SS+ASLRLKAKQH++F+Y ++ P +A N + CQY+ E
Sbjct: 144 CN---SSLASLRLKAKQHASFSYPAVHGPPPAA-NLSPCQYAVE 183
>gi|397510722|ref|XP_003825740.1| PREDICTED: LOW QUALITY PROTEIN: pituitary homeobox 3 [Pan paniscus]
Length = 310
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 32/44 (72%), Gaps = 4/44 (9%)
Query: 70 CNVMSSSIASLRLKAKQHSNFNYTSITPPVSSANNRAACQYSDE 113
CN SS+ASLRLKAKQH++F+Y ++ P +A N + CQY+ E
Sbjct: 268 CN---SSLASLRLKAKQHASFSYPAVHGPPPAA-NLSPCQYAVE 307
>gi|170061749|ref|XP_001866371.1| homeobox protein [Culex quinquefasciatus]
gi|167879868|gb|EDS43251.1| homeobox protein [Culex quinquefasciatus]
Length = 624
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/39 (56%), Positives = 28/39 (71%), Gaps = 8/39 (20%)
Query: 50 YSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHS 88
YSMY HR A+++P C M+SSIA+LRLKAKQH+
Sbjct: 428 YSMYHHR-AAAEP-------CTAMTSSIATLRLKAKQHT 458
>gi|300796563|ref|NP_001179234.1| pituitary homeobox 3 [Bos taurus]
gi|296472793|tpg|DAA14908.1| TPA: paired-like homeodomain 3-like [Bos taurus]
Length = 302
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 32/44 (72%), Gaps = 4/44 (9%)
Query: 70 CNVMSSSIASLRLKAKQHSNFNYTSITPPVSSANNRAACQYSDE 113
CN SS+ASLRLKAKQH++F+Y ++ P +A N + CQY+ E
Sbjct: 260 CN---SSLASLRLKAKQHASFSYPTVPGPPPAA-NLSPCQYAVE 299
>gi|295844825|ref|NP_001171524.1| pituitary homeobox 3 [Ovis aries]
gi|284919778|emb|CBA10128.1| paired-like homeodomain 3 [Ovis aries]
gi|295016061|emb|CBA10129.1| paired-like homeodomain 3 [Ovis aries]
gi|295016063|emb|CBA10130.1| paired-like homeodomain 3 [Ovis aries]
gi|295016065|emb|CBA10131.1| paired-like homeodomain 3 [Ovis aries]
Length = 302
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 32/44 (72%), Gaps = 4/44 (9%)
Query: 70 CNVMSSSIASLRLKAKQHSNFNYTSITPPVSSANNRAACQYSDE 113
CN SS+ASLRLKAKQH++F+Y ++ P +A N + CQY+ E
Sbjct: 260 CN---SSLASLRLKAKQHASFSYPTVPGPPPAA-NLSPCQYAVE 299
>gi|4826912|ref|NP_005020.1| pituitary homeobox 3 [Homo sapiens]
gi|114632532|ref|XP_521591.2| PREDICTED: pituitary homeobox 3 [Pan troglodytes]
gi|297687264|ref|XP_002821135.1| PREDICTED: pituitary homeobox 3 [Pongo abelii]
gi|332212662|ref|XP_003255438.1| PREDICTED: pituitary homeobox 3 [Nomascus leucogenys]
gi|426366014|ref|XP_004050060.1| PREDICTED: pituitary homeobox 3 [Gorilla gorilla gorilla]
gi|6093723|sp|O75364.1|PITX3_HUMAN RecName: Full=Pituitary homeobox 3; AltName: Full=Homeobox protein
PITX3; AltName: Full=Paired-like homeodomain
transcription factor 3
gi|3258633|gb|AAC24502.1| homeodomain protein [Homo sapiens]
gi|15079651|gb|AAH11642.1| Paired-like homeodomain 3 [Homo sapiens]
gi|123982084|gb|ABM82871.1| paired-like homeodomain transcription factor 3 [synthetic
construct]
gi|123996913|gb|ABM86058.1| paired-like homeodomain transcription factor 3 [synthetic
construct]
gi|208966992|dbj|BAG73510.1| paired-like homeodomain 3 [synthetic construct]
gi|410335095|gb|JAA36494.1| paired-like homeodomain 3 [Pan troglodytes]
Length = 302
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 32/44 (72%), Gaps = 4/44 (9%)
Query: 70 CNVMSSSIASLRLKAKQHSNFNYTSITPPVSSANNRAACQYSDE 113
CN SS+ASLRLKAKQH++F+Y ++ P +A N + CQY+ E
Sbjct: 260 CN---SSLASLRLKAKQHASFSYPAVHGPPPAA-NLSPCQYAVE 299
>gi|402881335|ref|XP_003904229.1| PREDICTED: pituitary homeobox 3 [Papio anubis]
Length = 302
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 32/44 (72%), Gaps = 4/44 (9%)
Query: 70 CNVMSSSIASLRLKAKQHSNFNYTSITPPVSSANNRAACQYSDE 113
CN SS+ASLRLKAKQH++F+Y ++ P +A N + CQY+ E
Sbjct: 260 CN---SSLASLRLKAKQHASFSYPAVHGPPPAA-NLSPCQYAVE 299
>gi|123996911|gb|ABM86057.1| paired-like homeodomain transcription factor 3 [synthetic
construct]
Length = 302
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 32/44 (72%), Gaps = 4/44 (9%)
Query: 70 CNVMSSSIASLRLKAKQHSNFNYTSITPPVSSANNRAACQYSDE 113
CN SS+ASLRLKAKQH++F+Y ++ P +A N + CQY+ E
Sbjct: 260 CN---SSLASLRLKAKQHASFSYPAVHGPPPAA-NLSPCQYAME 299
>gi|170053388|ref|XP_001862650.1| homeobox protein [Culex quinquefasciatus]
gi|167873959|gb|EDS37342.1| homeobox protein [Culex quinquefasciatus]
Length = 644
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 22/39 (56%), Positives = 28/39 (71%), Gaps = 8/39 (20%)
Query: 50 YSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHS 88
YSMY HR A+++P C M+SSIA+LRLKAKQH+
Sbjct: 518 YSMYHHR-AAAEP-------CTAMTSSIATLRLKAKQHT 548
>gi|440912409|gb|ELR61979.1| Pituitary homeobox 3 [Bos grunniens mutus]
Length = 267
Score = 40.4 bits (93), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 32/44 (72%), Gaps = 4/44 (9%)
Query: 70 CNVMSSSIASLRLKAKQHSNFNYTSITPPVSSANNRAACQYSDE 113
CN SS+ASLRLKAKQH++F+Y ++ P +A N + CQY+ E
Sbjct: 225 CN---SSLASLRLKAKQHASFSYPTVPGPPPAA-NLSPCQYAVE 264
>gi|87299449|dbj|BAE79557.1| pituitary homeobox [Halocynthia roretzi]
Length = 281
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 41/71 (57%), Gaps = 19/71 (26%)
Query: 43 YVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNF-NY-TSITPPVS 100
Y PY+ Y R A++DP CN SSIASLRLKAKQH+++ Y T + PP+
Sbjct: 223 YAGAANPYNSYGLR-ATTDP-------CN---SSIASLRLKAKQHTDYIGYPTVLEPPL- 270
Query: 101 SANNRAACQYS 111
AACQY+
Sbjct: 271 -----AACQYN 276
>gi|170962918|gb|ACB40929.1| paired-like homeodomain transcription factor 3 [Carassius auratus]
Length = 179
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 31/57 (54%), Gaps = 17/57 (29%)
Query: 34 GSVAAATCPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNF 90
+V+AA CPY +PY MY CN SS+ASLRLKAKQH+NF
Sbjct: 140 AAVSAAACPYATTASPY-MYRD-------------TCN---SSLASLRLKAKQHTNF 179
>gi|195452834|ref|XP_002073520.1| GK14162 [Drosophila willistoni]
gi|194169605|gb|EDW84506.1| GK14162 [Drosophila willistoni]
Length = 751
Score = 39.7 bits (91), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 49/81 (60%), Gaps = 13/81 (16%)
Query: 35 SVAAATCPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQH-SNFNYT 93
+V AA CPY PT PY MY A+++P + MSSSIA+LRLKAKQH + F+
Sbjct: 544 NVGAAPCPYTTPTNPY-MYR---AAAEP-----CMSSSMSSSIATLRLKAKQHATGFSSP 594
Query: 94 SITP-PVSSANNRA--ACQYS 111
P PVS +N+ ACQY+
Sbjct: 595 YSAPSPVSRSNSAGLSACQYT 615
>gi|310706335|gb|ADP08780.1| pituitary homeobox 1 [Astyanax mexicanus]
Length = 161
Score = 39.7 bits (91), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 29/53 (54%), Gaps = 16/53 (30%)
Query: 41 CPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFNYT 93
CPY PPTTPYS+Y + SSSIA LRLK QH +F+Y+
Sbjct: 123 CPYGPPTTPYSVYR----------------DSCSSSIAPLRLKPTQHPSFSYS 159
>gi|115665186|ref|XP_787549.2| PREDICTED: pituitary homeobox x-like [Strongylocentrotus
purpuratus]
gi|84095078|dbj|BAE66654.1| paired superclass homeobox transcription factor HpPitx
[Hemicentrotus pulcherrimus]
Length = 303
Score = 38.9 bits (89), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 22/38 (57%), Positives = 29/38 (76%), Gaps = 1/38 (2%)
Query: 74 SSSIASLRLKAKQHSNFNYTSITPPVSSANNRAACQYS 111
S+SIASLRLKAKQH N T ++ PV +++ +ACQYS
Sbjct: 261 SNSIASLRLKAKQHCE-NMTGVSYPVPQSSSLSACQYS 297
>gi|399153233|dbj|BAM35169.1| homeodomain transcription factor [Halocynthia roretzi]
gi|399153235|dbj|BAM35170.1| homeodomain transcription factor [Halocynthia roretzi]
Length = 608
Score = 38.5 bits (88), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 40/71 (56%), Gaps = 19/71 (26%)
Query: 43 YVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNF-NY-TSITPPVS 100
Y PY+ Y R A+ DP CN SSIASLRLKAKQH+++ Y T + PP+
Sbjct: 550 YAGAANPYNSYGLR-ATPDP-------CN---SSIASLRLKAKQHTDYIGYPTVLEPPL- 597
Query: 101 SANNRAACQYS 111
AACQY+
Sbjct: 598 -----AACQYN 603
>gi|194765091|ref|XP_001964661.1| GF22931 [Drosophila ananassae]
gi|190614933|gb|EDV30457.1| GF22931 [Drosophila ananassae]
Length = 605
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 47/84 (55%), Gaps = 14/84 (16%)
Query: 38 AATCPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFNYT---S 94
A CPY P PY MY A+++P + MSSSIA+LRLKAKQH++ + S
Sbjct: 528 GAPCPYTTPANPY-MYR---AAAEP-----CMSSSMSSSIATLRLKAKQHASAGFGSPYS 578
Query: 95 ITPPVSSANNRA--ACQYSDESVT 116
PVS +N+ ACQY+ VT
Sbjct: 579 APSPVSRSNSAGLSACQYTGVGVT 602
>gi|239937988|gb|ACS36093.1| pitx homeobox A2 [Eptatretus stoutii]
Length = 263
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 28/44 (63%), Gaps = 5/44 (11%)
Query: 70 CNVMSSSIASLRLKAKQHSNFNYTSITPPVSSANNRAACQYSDE 113
CN SS+ASLRLKAKQHS F Y P ++ +ACQY+ E
Sbjct: 222 CN---SSLASLRLKAKQHSGFGYPGGVQPTPAS--LSACQYAVE 260
>gi|239937986|gb|ACS36092.1| pitx homeobox A1 [Eptatretus stoutii]
Length = 268
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 28/44 (63%), Gaps = 5/44 (11%)
Query: 70 CNVMSSSIASLRLKAKQHSNFNYTSITPPVSSANNRAACQYSDE 113
CN SS+ASLRLKAKQHS F Y P ++ +ACQY+ E
Sbjct: 227 CN---SSLASLRLKAKQHSGFGYPGGVQPTPAS--LSACQYAVE 265
>gi|72008575|ref|XP_782344.1| PREDICTED: pituitary homeobox x-like [Strongylocentrotus
purpuratus]
Length = 314
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 27/38 (71%)
Query: 74 SSSIASLRLKAKQHSNFNYTSITPPVSSANNRAACQYS 111
S+SIASLRLKAKQH + N ++ PV + +ACQY+
Sbjct: 270 SNSIASLRLKAKQHHSSNVPGLSYPVRQSPTLSACQYA 307
>gi|198449449|ref|XP_001357586.2| GA13007 [Drosophila pseudoobscura pseudoobscura]
gi|198130612|gb|EAL26720.2| GA13007 [Drosophila pseudoobscura pseudoobscura]
Length = 588
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 48/89 (53%), Gaps = 13/89 (14%)
Query: 32 LDGSVAAATCPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQH-SNF 90
L S A CPY P PY MY A+++P + MSSSIA+LRLKAKQH + F
Sbjct: 506 LTNSNVGAPCPYTTPANPY-MYR---AAAEP-----CMSSSMSSSIATLRLKAKQHATGF 556
Query: 91 NYTSITP-PVSSANNRA--ACQYSDESVT 116
P PVS +N+ ACQY+ VT
Sbjct: 557 GSPYSAPSPVSRSNSAGLSACQYTGVGVT 585
>gi|195159085|ref|XP_002020413.1| GL13525 [Drosophila persimilis]
gi|194117182|gb|EDW39225.1| GL13525 [Drosophila persimilis]
Length = 589
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 48/89 (53%), Gaps = 13/89 (14%)
Query: 32 LDGSVAAATCPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQH-SNF 90
L S A CPY P PY MY A+++P + MSSSIA+LRLKAKQH + F
Sbjct: 507 LTNSNVGAPCPYTTPANPY-MYR---AAAEP-----CMSSSMSSSIATLRLKAKQHATGF 557
Query: 91 NYTSITP-PVSSANNRA--ACQYSDESVT 116
P PVS +N+ ACQY+ VT
Sbjct: 558 GSPYSAPSPVSRSNSAGLSACQYTGVGVT 586
>gi|195390899|ref|XP_002054104.1| GJ24250 [Drosophila virilis]
gi|194152190|gb|EDW67624.1| GJ24250 [Drosophila virilis]
Length = 709
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 44/114 (38%), Positives = 55/114 (48%), Gaps = 30/114 (26%)
Query: 1 MLPTGMTAPLTGSASPAGRRSALLMCLWVAELDGSVAAATCPYVPPTTPYSMYTHRPASS 60
MLP M + LT + G V AA CPY P PY MY A++
Sbjct: 508 MLPGSMGSTLTNTNVGVG-----------------VGAAPCPYTTPANPY-MYR---AAA 546
Query: 61 DPSLSRVAECNVMSSSIASLRLKAKQH-SNFNYTSITP-PVSSANNRA--ACQY 110
+P + MSSSIA+LRLKAKQH + F+ P PVS +N+ ACQY
Sbjct: 547 EP-----CMSSSMSSSIATLRLKAKQHATGFSSPYSAPSPVSRSNSAGLSACQY 595
>gi|149040300|gb|EDL94338.1| paired-like homeodomain transcription factor 3, isoform CRA_b
[Rattus norvegicus]
Length = 214
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 30/44 (68%), Gaps = 4/44 (9%)
Query: 70 CNVMSSSIASLRLKAKQHSNFNYTSITPPVSSANNRAACQYSDE 113
CN SS+ASLRLKAKQH++F+Y ++ A N + CQY+ E
Sbjct: 172 CN---SSLASLRLKAKQHASFSYPAVP-GPPPAANLSPCQYAVE 211
>gi|195113185|ref|XP_002001149.1| GI22129 [Drosophila mojavensis]
gi|193917743|gb|EDW16610.1| GI22129 [Drosophila mojavensis]
Length = 603
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 46/79 (58%), Gaps = 13/79 (16%)
Query: 36 VAAATCPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQH-SNFNYTS 94
V AA CPY P PY MY A+++P + MSSSIA+LRLKAKQH + F+
Sbjct: 528 VGAAPCPYTTPANPY-MYR---AAAEP-----CMSSSMSSSIATLRLKAKQHATGFSSPY 578
Query: 95 ITP-PVSSANNRA--ACQY 110
P PVS +N+ ACQY
Sbjct: 579 SAPSPVSRSNSAGLSACQY 597
>gi|2398591|emb|CAA04801.1| Ptx1 homeodomain protein [Drosophila melanogaster]
Length = 513
Score = 37.0 bits (84), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 47/84 (55%), Gaps = 14/84 (16%)
Query: 38 AATCPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFNYT---S 94
A CPY P PY MY ++++P + MSSSIA+LRLKAKQH++ + S
Sbjct: 436 GAPCPYTTPANPY-MYR---SAAEP-----CMSSSMSSSIATLRLKAKQHASAGFGSPYS 486
Query: 95 ITPPVSSANNRA--ACQYSDESVT 116
PVS +N+ ACQY+ VT
Sbjct: 487 APSPVSRSNSAGLSACQYTGVGVT 510
>gi|194041917|ref|XP_001925697.1| PREDICTED: pituitary homeobox 3-like [Sus scrofa]
Length = 531
Score = 37.0 bits (84), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 42/81 (51%), Gaps = 17/81 (20%)
Query: 35 SVAAATCPYVPPTTPY--SMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFNY 92
S A +CPY S Y +R DP CN SS+ASLRLKAKQH++F+Y
Sbjct: 463 SSGAVSCPYAAAAAAAASSPYVYR----DP-------CN---SSLASLRLKAKQHASFSY 508
Query: 93 TSITPPVSSANNRAACQYSDE 113
++ A N + CQY+ E
Sbjct: 509 PAVP-GPPPAANLSPCQYAVE 528
>gi|405962541|gb|EKC28207.1| Pituitary homeobox 2 [Crassostrea gigas]
Length = 312
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 26/42 (61%), Positives = 29/42 (69%), Gaps = 12/42 (28%)
Query: 74 SSSIASLRLKAKQHS-NFNYTSITPPVSSANNR----AACQY 110
SSSIASLRLKAKQHS +F Y PPV N+R +ACQY
Sbjct: 269 SSSIASLRLKAKQHSTSFGY----PPV---NHRQPTLSACQY 303
>gi|195575199|ref|XP_002105567.1| GD21552 [Drosophila simulans]
gi|194201494|gb|EDX15070.1| GD21552 [Drosophila simulans]
Length = 592
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 44/84 (52%), Gaps = 14/84 (16%)
Query: 38 AATCPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFNYT---S 94
A CPY P PY MY S + + MSSSIA+LRLKAKQH++ + S
Sbjct: 432 GAPCPYTTPANPY-MYR--------SAAEPCMSSSMSSSIATLRLKAKQHASAGFGSPYS 482
Query: 95 ITPPVSSANNRA--ACQYSDESVT 116
PVS +N+ ACQY+ VT
Sbjct: 483 APSPVSRSNSAGLSACQYTGVGVT 506
>gi|344274419|ref|XP_003409014.1| PREDICTED: LOW QUALITY PROTEIN: pituitary homeobox 3-like
[Loxodonta africana]
Length = 317
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 30/44 (68%), Gaps = 4/44 (9%)
Query: 70 CNVMSSSIASLRLKAKQHSNFNYTSITPPVSSANNRAACQYSDE 113
CN SS+ASLRLKAKQH++F+Y ++ A N + CQY+ E
Sbjct: 275 CN---SSLASLRLKAKQHASFSYPAVP-GPPPAANLSPCQYAVE 314
>gi|194905149|ref|XP_001981137.1| GG11784 [Drosophila erecta]
gi|190655775|gb|EDV53007.1| GG11784 [Drosophila erecta]
Length = 597
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 44/84 (52%), Gaps = 14/84 (16%)
Query: 38 AATCPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFNYT---S 94
A CPY P PY MY S + + MSSSIA+LRLKAKQH++ + S
Sbjct: 432 GAPCPYTTPANPY-MYR--------SAAEPCMSSSMSSSIATLRLKAKQHASAGFGSPYS 482
Query: 95 ITPPVSSANNRA--ACQYSDESVT 116
PVS +N+ ACQY+ VT
Sbjct: 483 APSPVSRSNSAGLSACQYTGVGVT 506
>gi|442621993|ref|NP_001138130.2| Ptx1, isoform E [Drosophila melanogaster]
gi|440218093|gb|ACL83586.2| Ptx1, isoform E [Drosophila melanogaster]
Length = 610
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 47/84 (55%), Gaps = 14/84 (16%)
Query: 38 AATCPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFNYT---S 94
A CPY P PY MY ++++P + MSSSIA+LRLKAKQH++ + S
Sbjct: 432 GAPCPYTTPANPY-MYR---SAAEP-----CMSSSMSSSIATLRLKAKQHASAGFGSPYS 482
Query: 95 ITPPVSSANNRA--ACQYSDESVT 116
PVS +N+ ACQY+ VT
Sbjct: 483 APSPVSRSNSAGLSACQYTGVGVT 506
>gi|395828473|ref|XP_003787402.1| PREDICTED: LOW QUALITY PROTEIN: pituitary homeobox 3 [Otolemur
garnettii]
Length = 450
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 30/44 (68%), Gaps = 4/44 (9%)
Query: 70 CNVMSSSIASLRLKAKQHSNFNYTSITPPVSSANNRAACQYSDE 113
CN SS+ASLRLKAKQH++F+Y ++ A N + CQY+ E
Sbjct: 408 CN---SSLASLRLKAKQHASFSYPAVP-GPPPAANLSPCQYAVE 447
>gi|195505320|ref|XP_002099453.1| GE10911 [Drosophila yakuba]
gi|194185554|gb|EDW99165.1| GE10911 [Drosophila yakuba]
Length = 717
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 47/84 (55%), Gaps = 14/84 (16%)
Query: 38 AATCPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFNYT---S 94
A CPY P PY MY ++++P + MSSSIA+LRLKAKQH++ + S
Sbjct: 553 GAPCPYTTPANPY-MYR---SAAEP-----CMSSSMSSSIATLRLKAKQHASAGFGSPYS 603
Query: 95 ITPPVSSANNRA--ACQYSDESVT 116
PVS +N+ ACQY+ VT
Sbjct: 604 APSPVSRSNSAGLSACQYTGVGVT 627
>gi|148710035|gb|EDL41981.1| paired-like homeodomain transcription factor 3 [Mus musculus]
Length = 348
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 30/44 (68%), Gaps = 4/44 (9%)
Query: 70 CNVMSSSIASLRLKAKQHSNFNYTSITPPVSSANNRAACQYSDE 113
CN SS+ASLRLKAKQH++F+Y ++ A N + CQY+ E
Sbjct: 306 CN---SSLASLRLKAKQHASFSYPAVP-GPPPAANLSPCQYAVE 345
>gi|28571942|ref|NP_733410.2| Ptx1, isoform A [Drosophila melanogaster]
gi|38258871|sp|O18400.2|PITX_DROME RecName: Full=Pituitary homeobox homolog Ptx1; Short=D-PTX1
gi|28381509|gb|AAF57099.3| Ptx1, isoform A [Drosophila melanogaster]
gi|33589384|gb|AAQ22459.1| RE41906p [Drosophila melanogaster]
gi|220955692|gb|ACL90389.1| Ptx1-PA [synthetic construct]
Length = 509
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 47/84 (55%), Gaps = 14/84 (16%)
Query: 38 AATCPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFNYT---S 94
A CPY P PY MY ++++P + MSSSIA+LRLKAKQH++ + S
Sbjct: 432 GAPCPYTTPANPY-MYR---SAAEP-----CMSSSMSSSIATLRLKAKQHASAGFGSPYS 482
Query: 95 ITPPVSSANNRA--ACQYSDESVT 116
PVS +N+ ACQY+ VT
Sbjct: 483 APSPVSRSNSAGLSACQYTGVGVT 506
>gi|45553794|ref|NP_996314.1| Ptx1, isoform C [Drosophila melanogaster]
gi|45446722|gb|AAS65234.1| Ptx1, isoform C [Drosophila melanogaster]
Length = 514
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 47/84 (55%), Gaps = 14/84 (16%)
Query: 38 AATCPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFNYT---S 94
A CPY P PY MY ++++P + MSSSIA+LRLKAKQH++ + S
Sbjct: 437 GAPCPYTTPANPY-MYR---SAAEP-----CMSSSMSSSIATLRLKAKQHASAGFGSPYS 487
Query: 95 ITPPVSSANNRA--ACQYSDESVT 116
PVS +N+ ACQY+ VT
Sbjct: 488 APSPVSRSNSAGLSACQYTGVGVT 511
>gi|195341650|ref|XP_002037419.1| GM12914 [Drosophila sechellia]
gi|194131535|gb|EDW53578.1| GM12914 [Drosophila sechellia]
Length = 621
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 47/84 (55%), Gaps = 14/84 (16%)
Query: 38 AATCPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFNYT---S 94
A CPY P PY MY ++++P + MSSSIA+LRLKAKQH++ + S
Sbjct: 462 GAPCPYTTPANPY-MYR---SAAEP-----CMSSSMSSSIATLRLKAKQHASAGFGSPYS 512
Query: 95 ITPPVSSANNRA--ACQYSDESVT 116
PVS +N+ ACQY+ VT
Sbjct: 513 APSPVSRSNSAGLSACQYTGVGVT 536
>gi|345792473|ref|XP_543986.3| PREDICTED: LOW QUALITY PROTEIN: pituitary homeobox 3 [Canis lupus
familiaris]
Length = 408
Score = 36.6 bits (83), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 30/44 (68%), Gaps = 4/44 (9%)
Query: 70 CNVMSSSIASLRLKAKQHSNFNYTSITPPVSSANNRAACQYSDE 113
CN SS+ASLRLKAKQH++F+Y ++ A N + CQY+ E
Sbjct: 366 CN---SSLASLRLKAKQHASFSYPAVP-GPPPAANLSPCQYAVE 405
>gi|6679341|ref|NP_032878.1| pituitary homeobox 3 [Mus musculus]
gi|3122612|sp|O35160.1|PITX3_MOUSE RecName: Full=Pituitary homeobox 3; AltName: Full=Homeobox protein
PITX3; AltName: Full=Paired-like homeodomain
transcription factor 3
gi|2645427|gb|AAB87380.1| homeobox protein Pitx3 [Mus musculus]
gi|111308398|gb|AAI20845.1| Paired-like homeodomain transcription factor 3 [Mus musculus]
gi|223460982|gb|AAI37811.1| Paired-like homeodomain transcription factor 3 [Mus musculus]
Length = 302
Score = 36.6 bits (83), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 30/44 (68%), Gaps = 4/44 (9%)
Query: 70 CNVMSSSIASLRLKAKQHSNFNYTSITPPVSSANNRAACQYSDE 113
CN SS+ASLRLKAKQH++F+Y ++ A N + CQY+ E
Sbjct: 260 CN---SSLASLRLKAKQHASFSYPAVP-GPPPAANLSPCQYAVE 299
>gi|9507015|ref|NP_062120.1| pituitary homeobox 3 [Rattus norvegicus]
gi|6226672|sp|P81062.2|PITX3_RAT RecName: Full=Pituitary homeobox 3; AltName: Full=Homeobox protein
PITX3; AltName: Full=Paired-like homeodomain
transcription factor 3
gi|4572639|emb|CAA09455.2| Ptx3 protein [Rattus norvegicus]
gi|149040298|gb|EDL94336.1| paired-like homeodomain transcription factor 3, isoform CRA_a
[Rattus norvegicus]
gi|149040299|gb|EDL94337.1| paired-like homeodomain transcription factor 3, isoform CRA_a
[Rattus norvegicus]
Length = 302
Score = 36.6 bits (83), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 30/44 (68%), Gaps = 4/44 (9%)
Query: 70 CNVMSSSIASLRLKAKQHSNFNYTSITPPVSSANNRAACQYSDE 113
CN SS+ASLRLKAKQH++F+Y ++ A N + CQY+ E
Sbjct: 260 CN---SSLASLRLKAKQHASFSYPAVP-GPPPAANLSPCQYAVE 299
>gi|432113039|gb|ELK35617.1| Pituitary homeobox 3 [Myotis davidii]
Length = 270
Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 30/44 (68%), Gaps = 4/44 (9%)
Query: 70 CNVMSSSIASLRLKAKQHSNFNYTSITPPVSSANNRAACQYSDE 113
CN SS+ASLRLKAKQH++F+Y ++ A N + CQY+ E
Sbjct: 228 CN---SSLASLRLKAKQHASFSYPAVP-GPPPAANLSPCQYAVE 267
>gi|390354222|ref|XP_797336.3| PREDICTED: pituitary homeobox 3-like [Strongylocentrotus
purpuratus]
Length = 433
Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 28/40 (70%), Gaps = 2/40 (5%)
Query: 74 SSSIASLRLKAKQHSN--FNYTSITPPVSSANNRAACQYS 111
++SIASLRLKAKQHS + T +T PV + +ACQY+
Sbjct: 383 TNSIASLRLKAKQHSESMTSMTGLTYPVRQSPTFSACQYA 422
>gi|348578441|ref|XP_003474991.1| PREDICTED: pituitary homeobox 3-like [Cavia porcellus]
Length = 449
Score = 36.6 bits (83), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 30/44 (68%), Gaps = 4/44 (9%)
Query: 70 CNVMSSSIASLRLKAKQHSNFNYTSITPPVSSANNRAACQYSDE 113
CN SS+ASLRLKAKQH++F+Y ++ A N + CQY+ E
Sbjct: 407 CN---SSLASLRLKAKQHASFSYPAVP-GPPPAANLSPCQYAVE 446
>gi|281352063|gb|EFB27647.1| hypothetical protein PANDA_001770 [Ailuropoda melanoleuca]
Length = 303
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 30/44 (68%), Gaps = 4/44 (9%)
Query: 70 CNVMSSSIASLRLKAKQHSNFNYTSITPPVSSANNRAACQYSDE 113
CN SS+ASLRLKAKQH++F+Y ++ A N + CQY+ E
Sbjct: 261 CN---SSLASLRLKAKQHASFSYPAVP-GPPPAANLSPCQYAVE 300
>gi|301756176|ref|XP_002913962.1| PREDICTED: pituitary homeobox 3-like [Ailuropoda melanoleuca]
Length = 438
Score = 36.2 bits (82), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 30/44 (68%), Gaps = 4/44 (9%)
Query: 70 CNVMSSSIASLRLKAKQHSNFNYTSITPPVSSANNRAACQYSDE 113
CN SS+ASLRLKAKQH++F+Y ++ A N + CQY+ E
Sbjct: 396 CN---SSLASLRLKAKQHASFSYPAVP-GPPPAANLSPCQYAVE 435
>gi|149689716|ref|XP_001499185.1| PREDICTED: pituitary homeobox 3-like [Equus caballus]
Length = 302
Score = 36.2 bits (82), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 30/44 (68%), Gaps = 4/44 (9%)
Query: 70 CNVMSSSIASLRLKAKQHSNFNYTSITPPVSSANNRAACQYSDE 113
CN SS+ASLRLKAKQH++F+Y ++ A N + CQY+ E
Sbjct: 260 CN---SSLASLRLKAKQHASFSYPAVP-GPPPAANLSPCQYAVE 299
>gi|383859051|ref|XP_003705011.1| PREDICTED: uncharacterized protein LOC100880156 [Megachile
rotundata]
Length = 420
Score = 36.2 bits (82), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 23/36 (63%), Positives = 25/36 (69%), Gaps = 7/36 (19%)
Query: 55 HRPASSDPSLSRVAECNVM-SSSIASLRLKAKQHSN 89
HR AS+ S C VM SSSIASLRLKA+QHSN
Sbjct: 246 HRTASAPES------CTVMTSSSIASLRLKARQHSN 275
>gi|344242147|gb|EGV98250.1| Pituitary homeobox 3 [Cricetulus griseus]
Length = 214
Score = 36.2 bits (82), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 30/44 (68%), Gaps = 4/44 (9%)
Query: 70 CNVMSSSIASLRLKAKQHSNFNYTSITPPVSSANNRAACQYSDE 113
CN SS+ASLRLKAKQH++F+Y ++ A N + CQY+ E
Sbjct: 172 CN---SSLASLRLKAKQHASFSYPAVP-GPPPAANLSPCQYAVE 211
>gi|260802145|ref|XP_002595953.1| hypothetical protein BRAFLDRAFT_267830 [Branchiostoma floridae]
gi|229281206|gb|EEN51965.1| hypothetical protein BRAFLDRAFT_267830 [Branchiostoma floridae]
Length = 332
Score = 36.2 bits (82), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 38/78 (48%), Gaps = 26/78 (33%)
Query: 39 ATCPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQH-----SNFNYT 93
A CPY P PY+ +CN SSIA+LRLKAKQH S+F+Y
Sbjct: 271 APCPYASPGQPYAYR--------------EQCN---SSIAALRLKAKQHSTSVASSFSYP 313
Query: 94 SITPPVSSANNRAACQYS 111
S PV +ACQY+
Sbjct: 314 S---PVRQ-QTLSACQYA 327
>gi|75025938|sp|Q9U637.1|PITX_BRABE RecName: Full=Pituitary homeobox x; AltName: Full=Bicoid type
transcription factor Pitx; Short=BbPtx; AltName:
Full=Homeobox protein Ptx; AltName: Full=Paired-like
homeodomain transcription factor x
gi|6110623|gb|AAF03901.1|AF195616_1 bicoid type transcription factor Pitx [Branchiostoma belcheri]
Length = 331
Score = 36.2 bits (82), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 38/78 (48%), Gaps = 26/78 (33%)
Query: 39 ATCPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQH-----SNFNYT 93
A CPY P PY+ +CN SSIA+LRLKAKQH S+F+Y
Sbjct: 270 APCPYASPGQPYAYR--------------EQCN---SSIAALRLKAKQHSTSVASSFSYP 312
Query: 94 SITPPVSSANNRAACQYS 111
S PV +ACQY+
Sbjct: 313 S---PVRQ-QTLSACQYA 326
>gi|28571944|ref|NP_788770.1| Ptx1, isoform B [Drosophila melanogaster]
gi|28381510|gb|AAO41617.1| Ptx1, isoform B [Drosophila melanogaster]
Length = 318
Score = 35.8 bits (81), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 47/84 (55%), Gaps = 14/84 (16%)
Query: 38 AATCPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQHSNFNYT---S 94
A CPY P PY MY ++++P + MSSSIA+LRLKAKQH++ + S
Sbjct: 241 GAPCPYTTPANPY-MYR---SAAEP-----CMSSSMSSSIATLRLKAKQHASAGFGSPYS 291
Query: 95 ITPPVSSANNRA--ACQYSDESVT 116
PVS +N+ ACQY+ VT
Sbjct: 292 APSPVSRSNSAGLSACQYTGVGVT 315
>gi|354491918|ref|XP_003508100.1| PREDICTED: pituitary homeobox 3-like [Cricetulus griseus]
Length = 186
Score = 35.8 bits (81), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 30/44 (68%), Gaps = 4/44 (9%)
Query: 70 CNVMSSSIASLRLKAKQHSNFNYTSITPPVSSANNRAACQYSDE 113
CN SS+ASLRLKAKQH++F+Y ++ A N + CQY+ E
Sbjct: 144 CN---SSLASLRLKAKQHASFSYPAVP-GPPPAANLSPCQYAVE 183
>gi|195061200|ref|XP_001995944.1| GH14222 [Drosophila grimshawi]
gi|193891736|gb|EDV90602.1| GH14222 [Drosophila grimshawi]
Length = 499
Score = 35.4 bits (80), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 45/79 (56%), Gaps = 13/79 (16%)
Query: 36 VAAATCPYVPPTTPYSMYTHRPASSDPSLSRVAECNVMSSSIASLRLKAKQH-SNFNYTS 94
VA A CPY P PY MY +++P + MSSSIA+LRLKAKQH + F+
Sbjct: 424 VAGAPCPYTTPANPY-MYR---TAAEP-----CMSSSMSSSIATLRLKAKQHATGFSSPY 474
Query: 95 ITP-PVSSANNRA--ACQY 110
P PVS +N+ ACQY
Sbjct: 475 SAPSPVSRSNSAGLSACQY 493
>gi|57545777|gb|AAW51825.1| PITX2 [Paracentrotus lividus]
Length = 318
Score = 35.4 bits (80), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 27/38 (71%)
Query: 74 SSSIASLRLKAKQHSNFNYTSITPPVSSANNRAACQYS 111
S+SIASLRLKAKQH + + ++ PV + +ACQY+
Sbjct: 274 SNSIASLRLKAKQHHSSSVPGLSYPVRQSPTLSACQYA 311
>gi|358459886|ref|ZP_09170078.1| hypothetical protein FrCN3DRAFT_4750 [Frankia sp. CN3]
gi|357076805|gb|EHI86272.1| hypothetical protein FrCN3DRAFT_4750 [Frankia sp. CN3]
Length = 356
Score = 35.0 bits (79), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 25/52 (48%)
Query: 1 MLPTGMTAPLTGSASPAGRRSALLMCLWVAELDGSVAAATCPYVPPTTPYSM 52
M G + LTGS P GR + +L L+ +L G V A T Y P + +
Sbjct: 154 MFVNGSSPRLTGSGQPGGRTTEMLRSLYSKQLSGHVPAVTTTYQPLIGEFVL 205
>gi|71006814|dbj|BAE07208.1| Pitx homolog [Asterina pectinifera]
Length = 328
Score = 35.0 bits (79), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 26/38 (68%), Gaps = 2/38 (5%)
Query: 74 SSSIASLRLKAKQHSNFNYTSITPPVSSANNRAACQYS 111
SSSIA+LRLKAKQHS + + PV + +ACQY+
Sbjct: 287 SSSIATLRLKAKQHSGMG--TFSYPVRQSPTLSACQYA 322
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.314 0.123 0.369
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,936,602,698
Number of Sequences: 23463169
Number of extensions: 65217713
Number of successful extensions: 202890
Number of sequences better than 100.0: 284
Number of HSP's better than 100.0 without gapping: 202
Number of HSP's successfully gapped in prelim test: 82
Number of HSP's that attempted gapping in prelim test: 202423
Number of HSP's gapped (non-prelim): 303
length of query: 126
length of database: 8,064,228,071
effective HSP length: 92
effective length of query: 34
effective length of database: 10,200,583,819
effective search space: 346819849846
effective search space used: 346819849846
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 71 (32.0 bits)