Query psy15890
Match_columns 126
No_of_seqs 43 out of 45
Neff 1.8
Searched_HMMs 13730
Date Sat Aug 17 00:15:47 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy15890.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/15890hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1hvwa_ g.3.6.2 (A:) Atracotox 11.2 36 0.0026 18.0 0.7 8 37-44 4-11 (26)
2 d1usga_ c.93.1.1 (A:) Leucine- 7.9 41 0.003 21.7 0.1 31 4-34 5-35 (346)
3 d1qo0a_ c.93.1.1 (A:) Amide re 7.7 44 0.0032 22.5 0.2 32 4-35 4-35 (373)
4 d1axha_ g.3.6.2 (A:) Atracotox 5.8 78 0.0056 17.8 0.6 8 37-44 7-14 (37)
5 d1wzla1 b.1.18.2 (A:1-120) Mal 5.0 1E+02 0.0074 19.2 0.8 18 70-87 15-32 (120)
6 d1ea9c1 b.1.18.2 (C:1-121) Mal 4.7 1.1E+02 0.0084 18.9 0.9 14 74-87 19-32 (121)
7 d3ckma1 c.93.1.1 (A:257-573) Y 4.5 56 0.0041 20.6 -0.8 16 5-20 4-19 (317)
8 d1jdpa_ c.93.1.1 (A:) Hormone 3.9 2E+02 0.015 18.2 1.6 31 4-34 10-40 (401)
9 d1f28a_ d.117.1.1 (A:) Thymidy 3.8 58 0.0043 24.3 -1.4 28 15-44 147-174 (295)
10 d2gysa2 b.1.2.1 (A:104-217) Co 3.7 1.8E+02 0.013 15.9 1.1 15 79-93 82-96 (114)
No 1
>d1hvwa_ g.3.6.2 (A:) Atracotoxin-hvI (versutoxin) {Australian funnel-web spider (Hadronyche versuta) [TaxId: 6904]}
Probab=11.16 E-value=36 Score=17.97 Aligned_cols=8 Identities=38% Similarity=1.090 Sum_probs=5.6
Q ss_pred CCCCCCCC
Q psy15890 37 AAATCPYV 44 (126)
Q Consensus 37 s~a~CPY~ 44 (126)
++.+|||.
T Consensus 4 sgqpcpyn 11 (26)
T d1hvwa_ 4 SGQPCPYN 11 (26)
T ss_dssp TTSBCSST
T ss_pred CCCcCCCC
Confidence 45788875
No 2
>d1usga_ c.93.1.1 (A:) Leucine-binding protein {Escherichia coli [TaxId: 562]}
Probab=7.89 E-value=41 Score=21.73 Aligned_cols=31 Identities=6% Similarity=0.095 Sum_probs=22.8
Q ss_pred CCCccccccCCCcchhhHHHHHhhhhhhccC
Q psy15890 4 TGMTAPLTGSASPAGRRSALLMCLWVAELDG 34 (126)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~l~~l~~a~l~~ 34 (126)
-|+..||||..+..|+...--.-|+..++|.
T Consensus 5 IG~~~plsG~~a~~G~~~~~g~~lav~~iN~ 35 (346)
T d1usga_ 5 VAVVGAMSGPIAQWGDMEFNGARQAIKDINA 35 (346)
T ss_dssp EEEEECSSSTTHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEeCCCCchHHhHHHHHHHHHHHHHHHHH
Confidence 4788999999988887665555566666664
No 3
>d1qo0a_ c.93.1.1 (A:) Amide receptor/negative regulator of the amidase operon (AmiC) {Pseudomonas aeruginosa [TaxId: 287]}
Probab=7.71 E-value=44 Score=22.51 Aligned_cols=32 Identities=22% Similarity=0.197 Sum_probs=22.8
Q ss_pred CCCccccccCCCcchhhHHHHHhhhhhhccCc
Q psy15890 4 TGMTAPLTGSASPAGRRSALLMCLWVAELDGS 35 (126)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~l~~l~~a~l~~a 35 (126)
-|+..|+||..+..|+-..-=.-|+..++|..
T Consensus 4 IG~~~p~tG~~a~~G~~~~~g~~lAv~~iN~~ 35 (373)
T d1qo0a_ 4 IGLLFSETGVTADIERSQRYGALLAVEQLNRE 35 (373)
T ss_dssp EEEECCSSSTTHHHHHHHHHHHHHHHHHHHHT
T ss_pred EEEEcCCcCchhhhhHHHHHHHHHHHHHHHhc
Confidence 48889999999998876544445556666643
No 4
>d1axha_ g.3.6.2 (A:) Atracotoxin-hvI (versutoxin) {Australian funnel-web spider (Hadronyche versuta) [TaxId: 6904]}
Probab=5.84 E-value=78 Score=17.78 Aligned_cols=8 Identities=38% Similarity=1.090 Sum_probs=4.7
Q ss_pred CCCCCCCC
Q psy15890 37 AAATCPYV 44 (126)
Q Consensus 37 s~a~CPY~ 44 (126)
++.+|||.
T Consensus 7 sgqpcpyn 14 (37)
T d1axha_ 7 SGQPCPYN 14 (37)
T ss_dssp TTSBCSSG
T ss_pred CCCcCCCc
Confidence 45667664
No 5
>d1wzla1 b.1.18.2 (A:1-120) Maltogenic amylase, N-terminal domain N {Thermoactinomyces vulgaris, TVAII [TaxId: 2026]}
Probab=5.00 E-value=1e+02 Score=19.22 Aligned_cols=18 Identities=28% Similarity=0.359 Sum_probs=11.9
Q ss_pred cccccccchhceeccccc
Q psy15890 70 CNVMSSSIASLRLKAKQH 87 (126)
Q Consensus 70 C~~msSSIASLRLKAKQH 87 (126)
|-.+....-.|||++|.+
T Consensus 15 ~y~~~~~~l~IRLRT~k~ 32 (120)
T d1wzla1 15 AYPISETQLRVRLRAKKG 32 (120)
T ss_dssp EEEEETTEEEEEEEEETT
T ss_pred eEecCCCEEEEEEEeccC
Confidence 433345666899999865
No 6
>d1ea9c1 b.1.18.2 (C:1-121) Maltogenic amylase, N-terminal domain N {Bacillus sp., cyclomaltodextrinase [TaxId: 1409]}
Probab=4.73 E-value=1.1e+02 Score=18.92 Aligned_cols=14 Identities=21% Similarity=0.525 Sum_probs=8.9
Q ss_pred cccchhceeccccc
Q psy15890 74 SSSIASLRLKAKQH 87 (126)
Q Consensus 74 sSSIASLRLKAKQH 87 (126)
....-.|||++|..
T Consensus 19 ~~~~l~IRLRT~k~ 32 (121)
T d1ea9c1 19 NGTTVHLRIRTKKD 32 (121)
T ss_dssp SSSCEECCCEECTT
T ss_pred CCCEEEEEEEeccC
Confidence 34556777877754
No 7
>d3ckma1 c.93.1.1 (A:257-573) YraM C-terminal domain {Haemophilus influenzae [TaxId: 727]}
Probab=4.46 E-value=56 Score=20.59 Aligned_cols=16 Identities=31% Similarity=0.630 Sum_probs=13.1
Q ss_pred CCccccccCCCcchhh
Q psy15890 5 GMTAPLTGSASPAGRR 20 (126)
Q Consensus 5 ~~~~~~~~~~~~~~~~ 20 (126)
|+..||||..+..|.-
T Consensus 4 G~~lPlSG~~a~~G~~ 19 (317)
T d3ckma1 4 GLLLPLSGDGQILGTT 19 (317)
T ss_dssp EEEECCSSTTHHHHHH
T ss_pred EEEeCCCCccHHHHHH
Confidence 7788999998888763
No 8
>d1jdpa_ c.93.1.1 (A:) Hormone binding domain of the atrial natriuretic peptide receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=3.86 E-value=2e+02 Score=18.20 Aligned_cols=31 Identities=13% Similarity=-0.004 Sum_probs=20.5
Q ss_pred CCCccccccCCCcchhhHHHHHhhhhhhccC
Q psy15890 4 TGMTAPLTGSASPAGRRSALLMCLWVAELDG 34 (126)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~l~~l~~a~l~~ 34 (126)
-|...|+||+..-.|.+-.--.-|...++|.
T Consensus 10 igvllP~tg~~~~~~~~~~~a~~lAv~~iN~ 40 (401)
T d1jdpa_ 10 VLVLLPQDDSYLFSLTRVRPAIEYALRSVEG 40 (401)
T ss_dssp EEEEECSSTTSTTCHHHHHHHHHHHHHHHCC
T ss_pred EEEEECCCCchhhhhHHHHHHHHHHHHHHHh
Confidence 3677899999888887643333444555664
No 9
>d1f28a_ d.117.1.1 (A:) Thymidylate synthase {Pneumocystis carinii [TaxId: 4754]}
Probab=3.78 E-value=58 Score=24.26 Aligned_cols=28 Identities=29% Similarity=0.509 Sum_probs=18.8
Q ss_pred CcchhhHHHHHhhhhhhccCcCCCCCCCCC
Q psy15890 15 SPAGRRSALLMCLWVAELDGSVAAATCPYV 44 (126)
Q Consensus 15 ~~~~~~~~~l~~l~~a~l~~avs~a~CPY~ 44 (126)
.|..|| +++.+|+++--..++-+||++.
T Consensus 147 nP~sRR--~iis~Wnp~~l~~~~LpPCh~~ 174 (295)
T d1f28a_ 147 SPYDRR--LILSAWNPADLEKMALPPCHMF 174 (295)
T ss_dssp CTTCSC--CEEECCCTTTGGGSSSCCSEEE
T ss_pred CCCccc--eEEEeccHhHhcccccccccee
Confidence 355565 4667888874446677889875
No 10
>d2gysa2 b.1.2.1 (A:104-217) Common beta-chain in the GM-CSF, IL-3 and IL-5 receptors {Human (Homo sapiens) [TaxId: 9606]}
Probab=3.67 E-value=1.8e+02 Score=15.93 Aligned_cols=15 Identities=7% Similarity=0.173 Sum_probs=11.1
Q ss_pred hceecccccCCCccC
Q psy15890 79 SLRLKAKQHSNFNYT 93 (126)
Q Consensus 79 SLRLKAKQHs~f~Y~ 93 (126)
.+|++||-+.+.+|.
T Consensus 82 ~~rVRa~~~~g~~~~ 96 (114)
T d2gysa2 82 VARVRTRLAPGSRLS 96 (114)
T ss_dssp EEEEEEEECTTSSCC
T ss_pred EEEEEEEeCCCCCCC
Confidence 678999987766554
Done!