BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy15891
(899 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|307184738|gb|EFN71060.1| DNA polymerase subunit gamma-1, mitochondrial [Camponotus floridanus]
Length = 1254
Score = 892 bits (2304), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 451/895 (50%), Positives = 604/895 (67%), Gaps = 80/895 (8%)
Query: 4 ESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLATF 63
++W + +SLNSL EV+KLYC G + K R+IFVEG++ED++NN++ LMTYCA D +A
Sbjct: 410 DNWQSNTSLNSLIEVHKLYC-GSEISKESRDIFVEGTIEDVKNNFNMLMTYCASDAVA-- 466
Query: 64 EVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLAG 123
T V++ LFPLF ERFPHPVTLAG
Sbjct: 467 ------------------------------------THNVLRNLFPLFQERFPHPVTLAG 490
Query: 124 MLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDKYKDSLWLW 183
MLEL +AYLPVN+NW +Y ES TF+DLN E K L + D C L+HD+KYK LW+W
Sbjct: 491 MLELGSAYLPVNSNWQRYLEESESTFDDLNYEAKFTLAKRADTVCHLMHDEKYKQDLWMW 550
Query: 184 DQDWSVKDLKLKKKANKTLSVDQ-ETEEPEEFYEINKNGEDQTEDEFVKRRRELVEKFKP 242
DQDWS +++K+K K K + +D ET++ E+ + +D+ E++ L ++F
Sbjct: 551 DQDWSTQEIKMKAKMPKKVKLDNIETKDMEKLSDKKYLSDDEEEEQ-----DPLAKEFAY 605
Query: 243 LMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIPGPSL 302
L +T+ LPV ++ GYP WYRKLC KP+ D W+PGP
Sbjct: 606 LEETRYLLPVRMPHMPGYPAWYRKLCPKPNDED--------------------WMPGPQN 645
Query: 303 ISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTDIKVPDAENIPLEQLKQLYNNIT 362
ISTSMQ+ PKLL+LTW+ PLH+IR HGWG LVPY+ D+ + +PL+ L Y +
Sbjct: 646 ISTSMQVVPKLLNLTWEKYPLHYIREHGWGILVPYNNDLDI--ETKLPLKNL-LAYCPLP 702
Query: 363 KQDNCEANVDNAQNSLRDSVETNISFIDCSKSAKRLEVIANVLDKKKLAEASSTDTSTDD 422
+ ++A ++LR V+ ++ + + K+ N D K + + + + D
Sbjct: 703 TSKSSRDISEDAMSTLRTDVQNDLHKTEFWQFKKK----QNGPDDK-IYKGTGVWCNVDI 757
Query: 423 ADTPREIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEISRMLSYWR 482
+ F KLPHKDG NVGNPL++DF+NKFS+N LAG+++ A +++I+RMLSYWR
Sbjct: 758 DNC---CYFFKLPHKDGVSRNVGNPLAKDFLNKFSENVLAGLNVSAAEVLKIARMLSYWR 814
Query: 483 NNHERVKKQFVVWLNKKDLPRRLVENIESEGRDYGVILPQLIVSGTLTRRAVEATWMTAS 542
NN +R+ Q V+WL+ LP ++ I+ R YG I+PQ++VSGTLTRRAVE TWMTAS
Sbjct: 815 NNRDRIMSQLVIWLDDHSLPGS-IKRIKKHMR-YGAIIPQVVVSGTLTRRAVEPTWMTAS 872
Query: 543 NAVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSG 602
NA ER+GSELR M+QAP GY+I+GADVDSQELWIAS+IGD++ HGATP GWMTL G
Sbjct: 873 NAHIERIGSELRCMVQAPPGYNIVGADVDSQELWIASIIGDAHYKSIHGATPFGWMTLIG 932
Query: 603 QKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKAR 662
KSN TDMHS+TAKA+GISR+HAK+INYARIYGAG++FAERLLKQFNP M+ ++A SK+R
Sbjct: 933 TKSNGTDMHSVTAKAIGISRDHAKVINYARIYGAGQKFAERLLKQFNPSMTDAEATSKSR 992
Query: 663 KMYTLTKGKKLYRLKDGHL-EELIKRVYSKYEAREVCSAYNTSVDKIFDKPQWYGGTESA 721
KM+ LTKGKK++RLK + +L ++Y+ Y+A ++ + ++ +F K +W G+ESA
Sbjct: 993 KMFALTKGKKVFRLKAEFINNDLEDKLYTSYQAYQMAKLHGKTLQDMFQKSEWMDGSESA 1052
Query: 722 MFNRLEEIATSLQPVTPFLNCRLSRALEPV-SEDDSKFIQTRINWVVQSGAVDFLHLMLV 780
MFNRLEEIA S PVTPFLN RLSRALE ++DD KF+ T+INWVVQSGAVDFLHLMLV
Sbjct: 1053 MFNRLEEIAGSKHPVTPFLNARLSRALEITDTDDDDKFLPTKINWVVQSGAVDFLHLMLV 1112
Query: 781 CMRWLVSRDTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIPLSI 840
CMRWL+ + RF +S HDE+RYLVP KY ALA+HVTNLLTR+FC +L M D+P+S+
Sbjct: 1113 CMRWLMRDNARFCLSFHDEVRYLVPSRYKYNAALAMHVTNLLTRSFCASRLGMKDLPMSV 1172
Query: 841 SFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKANGVIG 895
+FF+ VE+D VLRKES +DCKTPSNP+GL GY + GE LD++ ++K+ G +G
Sbjct: 1173 AFFAAVEVDTVLRKESAHDCKTPSNPHGLQNGYEVSPGESLDVWAALEKSGGSLG 1227
>gi|270006334|gb|EFA02782.1| hypothetical protein TcasGA2_TC008519 [Tribolium castaneum]
Length = 1050
Score = 884 bits (2284), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/892 (51%), Positives = 584/892 (65%), Gaps = 102/892 (11%)
Query: 3 DESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLAT 62
DE W SSLNSL+EV+KLYC GK + K R++FV GSL DI + +M YC+ D +AT
Sbjct: 249 DEIWKQHSSLNSLNEVHKLYCGGKSVAKETRDLFVTGSLNDIREEFQTVMKYCSGDVVAT 308
Query: 63 FEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLA 122
+ V+ LFP+FLERFPHPVTLA
Sbjct: 309 --------------------------------------YSVLNELFPMFLERFPHPVTLA 330
Query: 123 GMLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDKYKDSLWL 182
GMLELST YLP+N+NW +Y + S Q + D+++E + LL + +QAC LLHDDKYK+ LWL
Sbjct: 331 GMLELSTGYLPINSNWNRYIDNSEQAYEDMDIEGRLLLAKRAEQACQLLHDDKYKEDLWL 390
Query: 183 WDQDWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRRELVEKFKP 242
WD+DW+VK+LK+KK + KT + ET P+ + +D+ D L EKF+
Sbjct: 391 WDEDWTVKNLKIKKTSPKTKQI--ETPPPQ-------SPDDEATDP-------LEEKFRD 434
Query: 243 LMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIPGPSL 302
LM TK + +S+L GYP WYRKL KP S D W+PGP L
Sbjct: 435 LMATKANISRVNSHLPGYPTWYRKLSTKPDSPD--------------------WVPGPHL 474
Query: 303 ISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTDIKVPDAENIPLEQLKQLYNNIT 362
ISTS +ITPKLLSLTW+ PLH+ R GWG+L+P++ D + + +PL +L
Sbjct: 475 ISTSTRITPKLLSLTWEGYPLHYTREKGWGFLIPFTDDTET--SRKLPLAKL-------- 524
Query: 363 KQDNCEANVDNAQNSLRDSVETNISFIDCSKSAKRLEVIANVLDKKKLAEASSTDTSTDD 422
+ C + N + NI+ I V N++ K+ ++ TS
Sbjct: 525 -LEKCPLSKINTKEHDSSDTFANITQI----------VQDNLMRKEYYSKIRKDKTSGIW 573
Query: 423 ADTPRE--IGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEISRMLSY 480
T E F+KLPHK+G NVGNPL++DF+NKFS+N LAG A++++ I+R L Y
Sbjct: 574 CSTEIEDCCYFLKLPHKNGAAYNVGNPLAKDFLNKFSENVLAGDTQSAEQVLAIARTLWY 633
Query: 481 WRNNHERVKKQFVVWLNKKDLPRRLVENIESEGRDYGVILPQLIVSGTLTRRAVEATWMT 540
WRNN +R+ Q VVW + L +G G I+PQ++V GTLTRRAVE TWMT
Sbjct: 634 WRNNRDRIFDQMVVWCDGAQRGAAL-----DDGAQRGAIIPQVVVCGTLTRRAVEPTWMT 688
Query: 541 ASNAVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTL 600
ASNA +RVGSELRAM+QAP GY+IIGADVDSQELWIAS+IGD+ A+ HGATP GWMTL
Sbjct: 689 ASNARPDRVGSELRAMVQAPPGYNIIGADVDSQELWIASIIGDADRARLHGATPFGWMTL 748
Query: 601 SGQKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSK 660
SG K+++TDMHS+TAKAVGISR+HAK+INYARIYGAG+ FAERLLKQFNP MS +AK+K
Sbjct: 749 SGTKADSTDMHSVTAKAVGISRDHAKVINYARIYGAGQNFAERLLKQFNPSMSDGEAKTK 808
Query: 661 ARKMYTLTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQWYGGTES 720
A KM+ LTKGK++YRLK + E + YS ++A E+ +N +D +F++P+W GGTES
Sbjct: 809 AAKMFALTKGKRIYRLKKEFVLEYYDQNYSHWQAFEIAKTWNRRIDDMFERPKWVGGTES 868
Query: 721 AMFNRLEEIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLV 780
AMFNRLE IATS +P TPFLN RLSRALEP D +F+ TRINWVVQSGA DFLHLMLV
Sbjct: 869 AMFNRLESIATSQEPRTPFLNGRLSRALEPKLSSDDRFLPTRINWVVQSGAADFLHLMLV 928
Query: 781 CMRWLVSRDTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIPLSI 840
CMRW++ + RF +S HDE+RYLVP+ KY+ ALA+HVTNLLTRAFC +L + D+P S+
Sbjct: 929 CMRWIMGENARFCLSFHDEVRYLVPERFKYQGALAMHVTNLLTRAFCSVRLGIYDLPQSV 988
Query: 841 SFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKANG 892
+FFS VE+D VLRK++ +DC TPSNP+GL KGY IP GE LDI Q + KA G
Sbjct: 989 AFFSSVEVDTVLRKDAKDDCMTPSNPHGLEKGYNIPNGEGLDINQAVKKAGG 1040
>gi|189236910|ref|XP_968888.2| PREDICTED: similar to DNA polymerase subunit gamma 1, mitochondrial
[Tribolium castaneum]
Length = 1093
Score = 884 bits (2284), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/892 (51%), Positives = 584/892 (65%), Gaps = 102/892 (11%)
Query: 3 DESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLAT 62
DE W SSLNSL+EV+KLYC GK + K R++FV GSL DI + +M YC+ D +AT
Sbjct: 292 DEIWKQHSSLNSLNEVHKLYCGGKSVAKETRDLFVTGSLNDIREEFQTVMKYCSGDVVAT 351
Query: 63 FEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLA 122
+ V+ LFP+FLERFPHPVTLA
Sbjct: 352 --------------------------------------YSVLNELFPMFLERFPHPVTLA 373
Query: 123 GMLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDKYKDSLWL 182
GMLELST YLP+N+NW +Y + S Q + D+++E + LL + +QAC LLHDDKYK+ LWL
Sbjct: 374 GMLELSTGYLPINSNWNRYIDNSEQAYEDMDIEGRLLLAKRAEQACQLLHDDKYKEDLWL 433
Query: 183 WDQDWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRRELVEKFKP 242
WD+DW+VK+LK+KK + KT + ET P+ + +D+ D L EKF+
Sbjct: 434 WDEDWTVKNLKIKKTSPKTKQI--ETPPPQ-------SPDDEATDP-------LEEKFRD 477
Query: 243 LMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIPGPSL 302
LM TK + +S+L GYP WYRKL KP S D W+PGP L
Sbjct: 478 LMATKANISRVNSHLPGYPTWYRKLSTKPDSPD--------------------WVPGPHL 517
Query: 303 ISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTDIKVPDAENIPLEQLKQLYNNIT 362
ISTS +ITPKLLSLTW+ PLH+ R GWG+L+P++ D + + +PL +L
Sbjct: 518 ISTSTRITPKLLSLTWEGYPLHYTREKGWGFLIPFTDDTET--SRKLPLAKL-------- 567
Query: 363 KQDNCEANVDNAQNSLRDSVETNISFIDCSKSAKRLEVIANVLDKKKLAEASSTDTSTDD 422
+ C + N + NI+ I V N++ K+ ++ TS
Sbjct: 568 -LEKCPLSKINTKEHDSSDTFANITQI----------VQDNLMRKEYYSKIRKDKTSGIW 616
Query: 423 ADTPRE--IGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEISRMLSY 480
T E F+KLPHK+G NVGNPL++DF+NKFS+N LAG A++++ I+R L Y
Sbjct: 617 CSTEIEDCCYFLKLPHKNGAAYNVGNPLAKDFLNKFSENVLAGDTQSAEQVLAIARTLWY 676
Query: 481 WRNNHERVKKQFVVWLNKKDLPRRLVENIESEGRDYGVILPQLIVSGTLTRRAVEATWMT 540
WRNN +R+ Q VVW + L +G G I+PQ++V GTLTRRAVE TWMT
Sbjct: 677 WRNNRDRIFDQMVVWCDGAQRGAAL-----DDGAQRGAIIPQVVVCGTLTRRAVEPTWMT 731
Query: 541 ASNAVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTL 600
ASNA +RVGSELRAM+QAP GY+IIGADVDSQELWIAS+IGD+ A+ HGATP GWMTL
Sbjct: 732 ASNARPDRVGSELRAMVQAPPGYNIIGADVDSQELWIASIIGDADRARLHGATPFGWMTL 791
Query: 601 SGQKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSK 660
SG K+++TDMHS+TAKAVGISR+HAK+INYARIYGAG+ FAERLLKQFNP MS +AK+K
Sbjct: 792 SGTKADSTDMHSVTAKAVGISRDHAKVINYARIYGAGQNFAERLLKQFNPSMSDGEAKTK 851
Query: 661 ARKMYTLTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQWYGGTES 720
A KM+ LTKGK++YRLK + E + YS ++A E+ +N +D +F++P+W GGTES
Sbjct: 852 AAKMFALTKGKRIYRLKKEFVLEYYDQNYSHWQAFEIAKTWNRRIDDMFERPKWVGGTES 911
Query: 721 AMFNRLEEIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLV 780
AMFNRLE IATS +P TPFLN RLSRALEP D +F+ TRINWVVQSGA DFLHLMLV
Sbjct: 912 AMFNRLESIATSQEPRTPFLNGRLSRALEPKLSSDDRFLPTRINWVVQSGAADFLHLMLV 971
Query: 781 CMRWLVSRDTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIPLSI 840
CMRW++ + RF +S HDE+RYLVP+ KY+ ALA+HVTNLLTRAFC +L + D+P S+
Sbjct: 972 CMRWIMGENARFCLSFHDEVRYLVPERFKYQGALAMHVTNLLTRAFCSVRLGIYDLPQSV 1031
Query: 841 SFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKANG 892
+FFS VE+D VLRK++ +DC TPSNP+GL KGY IP GE LDI Q + KA G
Sbjct: 1032 AFFSSVEVDTVLRKDAKDDCMTPSNPHGLEKGYNIPNGEGLDINQAVKKAGG 1083
>gi|170053309|ref|XP_001862614.1| DNA polymerase subunit gamma 1, mitochondrial [Culex
quinquefasciatus]
gi|167873869|gb|EDS37252.1| DNA polymerase subunit gamma 1, mitochondrial [Culex
quinquefasciatus]
Length = 1150
Score = 882 bits (2278), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 463/895 (51%), Positives = 576/895 (64%), Gaps = 87/895 (9%)
Query: 1 MTDESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTL 60
+ D SW++ SSLN+L++VY LYC+G LDK RN+FVEG+L +I + +LM+YCA D
Sbjct: 302 LEDLSWSSQSSLNNLADVYSLYCDGAKLDKEKRNLFVEGTLPEIRAEFQSLMSYCAGDVA 361
Query: 61 ATFEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVT 120
AT V + LFPLFL+RFPHP T
Sbjct: 362 ATRNV--------------------------------------LTKLFPLFLQRFPHPAT 383
Query: 121 LAGMLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDKYKDSL 180
LAGMLE+ AYLPVN+NW +Y ES + DL++E K LL + D AC LLHD +++ L
Sbjct: 384 LAGMLEVGNAYLPVNSNWPRYIQESDLAYEDLDIEAKHLLAQRADAACRLLHDAEFRKDL 443
Query: 181 WLWDQDWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRRELVEKF 240
WLWDQDWSV++LKLK + E EI++ DE V L KF
Sbjct: 444 WLWDQDWSVQELKLKVAKKVGRKKKKG-----EVGEISEEAGGSV-DEQVDEEDALAAKF 497
Query: 241 KPLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIPGP 300
+ L +TK LPV L GYP WYR LC KP T+E W PGP
Sbjct: 498 QYLYETKALLPVRRPLLPGYPAWYRNLCSKP--------------------TTEDWSPGP 537
Query: 301 SLISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVP--YSTDIKVPDAENIPLEQLKQLY 358
+ I T MQI PKLL L W+ PLH+IRG GWG+LVP Y D + D IPLEQL +
Sbjct: 538 TEIGTGMQIAPKLLRLCWEGYPLHYIRGQGWGFLVPHKYRRDEEDEDGGQIPLEQL--VA 595
Query: 359 NNITKQDNCEANVDNAQNSL----RDSVETNISFIDCSKSAKRLEVIANVLDKKKLAEAS 414
+ N A+ D + +L RD VE IS D + K+ K + + +
Sbjct: 596 ACPVLEINPAASADESSEALEGLWRD-VEATISRKDYYRKLKQD-------GNKNVYKGT 647
Query: 415 STDTSTDDADTPREIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEI 474
+ D + F+KLPHKDG VGNPLS+DF+NKFS+N LAG A+R++EI
Sbjct: 648 GIWCNLDLEEC---CYFLKLPHKDGPSHRVGNPLSKDFLNKFSENVLAGDGKTAERVVEI 704
Query: 475 SRMLSYWRNNHERVKKQFVVWLNKKDLPRRLVENIESEGRDYGVILPQLIVSGTLTRRAV 534
+RMLSYWRNN +R+ Q V WL K+ LPR L E ++G I+PQ++V GTLTRRA+
Sbjct: 705 ARMLSYWRNNRDRITGQLVGWLGKESLPREL----RDEEMEFGAIIPQVVVCGTLTRRAM 760
Query: 535 EATWMTASNAVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATP 594
E TWMTASNA ER+GSELRAM+QAP G+ ++GADVDSQELWIASV+GD + A HGATP
Sbjct: 761 EPTWMTASNAQRERIGSELRAMVQAPRGFKLVGADVDSQELWIASVLGDGHAAAIHGATP 820
Query: 595 LGWMTLSGQKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSK 654
LGWMTLSG K+ TDMHS+TA+AVGISR+HAK+INYARIYGAG+ FAERLLKQFNP S
Sbjct: 821 LGWMTLSGTKAAKTDMHSVTAQAVGISRDHAKVINYARIYGAGQNFAERLLKQFNPTFSD 880
Query: 655 SDAKSKARKMYTLTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQW 714
++A+SKA KM+ LTKGKK Y LK+ +EL ++ YS YEA + N V +IF++ +W
Sbjct: 881 AEARSKAIKMFALTKGKKFYYLKEEFRDELPEKPYSAYEALKTAKICNKPVTEIFERARW 940
Query: 715 YGGTESAMFNRLEEIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDF 774
GGTESAMFNRLEEIA S PVTPFL RLSRALEP + +F+ TRINWVVQSGAVDF
Sbjct: 941 EGGTESAMFNRLEEIADSPTPVTPFLGGRLSRALEPQEGTEDRFLPTRINWVVQSGAVDF 1000
Query: 775 LHLMLVCMRWLVSRDTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMT 834
LHLMLV MRWL+ RF +S HDE+RYLV D+ Y ALA+HVTNLLTRAFC+ ++ +
Sbjct: 1001 LHLMLVAMRWLMGDRVRFCLSFHDEVRYLVEDQYAYRAALAMHVTNLLTRAFCVSRIGLA 1060
Query: 835 DIPLSISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDK 889
D+P S++FFS VE+D VLRKES DC+TPSNP+GL GYGIP GE LDI Q ++K
Sbjct: 1061 DLPQSVAFFSTVEVDSVLRKESHLDCRTPSNPHGLAIGYGIPNGESLDIAQLLEK 1115
>gi|322796178|gb|EFZ18754.1| hypothetical protein SINV_08354 [Solenopsis invicta]
Length = 1253
Score = 874 bits (2257), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 452/903 (50%), Positives = 591/903 (65%), Gaps = 86/903 (9%)
Query: 4 ESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLATF 63
E W +SLNSL EV+KLYC G + K R++FV+G++EDI +N+ LM+YCA DT+
Sbjct: 414 EIWLPNTSLNSLVEVHKLYC-GYEISKEGRDLFVKGTIEDIRDNFDMLMSYCASDTI--- 469
Query: 64 EVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLAG 123
AT +++ LFPLF ERFPHPVTLAG
Sbjct: 470 -----------------------------------ATHNILRNLFPLFQERFPHPVTLAG 494
Query: 124 MLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDKYKDSLWLW 183
MLEL +AYLPVN+NW +Y ES TF+DLN E K L + D C L+HD+KYK+ LW+W
Sbjct: 495 MLELGSAYLPVNSNWQRYLEESESTFDDLNYEAKFTLAKRADAVCHLMHDEKYKEDLWMW 554
Query: 184 DQDWSVKDLKLKKKANKTLSVDQETEEPEEFYEIN-----KNGEDQTEDEFVKRRRELVE 238
DQDWS +++K+K K +K V ET E E + + E++ ED K
Sbjct: 555 DQDWSRQEIKMKSKMSKVKPVGVETNVAETVKESDTKKYLSDAEEEEEDHLAK------- 607
Query: 239 KFKPLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIP 298
+F L QT+ LP ++ GYP WYRKLC P +D+D W
Sbjct: 608 EFAYLEQTRHLLPARMPHMPGYPAWYRKLC--PKQSDED------------------WTA 647
Query: 299 GPSLISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTDIKVPDAENIPLEQLKQLY 358
GP ISTSMQ+ PKLL+LTW+ PLH+I+ HGWG LVPY+ D+ + +PL+ L
Sbjct: 648 GPQNISTSMQVVPKLLNLTWEKYPLHYIKDHGWGILVPYNDDLDI--ETKVPLKNL-LAQ 704
Query: 359 NNITKQDNCEANVDNAQNSLRDSVETNISFIDCSKSAKRLEVIANVLDKKKLAEASSTDT 418
+ D+A +L V+ ++ I+ + K+ N + K
Sbjct: 705 CPLPASSQSRDISDDAMATLSTDVQNDLHKIEFWRFKKKQNESYNEMYKGTGVWC----- 759
Query: 419 STDDADTPREIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEISRML 478
+ D F KLPHKDG + NVGNPL++DF+NKFS+N LAG+DI A +++I+RML
Sbjct: 760 ---NVDIDNCCYFFKLPHKDGANYNVGNPLAKDFLNKFSENVLAGLDISAAEVLKIARML 816
Query: 479 SYWRNNHERVKKQFVVWLNKKDLPRRLVENIESEGRDYGVILPQLIVSGTLTRRAVEATW 538
SYWRNN +R+ Q V+WL+ LP +V+ + R YG I+PQ++VSGTLTRRAVE TW
Sbjct: 817 SYWRNNRDRIMSQLVIWLDNHSLPG-IVKRTKRHTR-YGAIIPQVVVSGTLTRRAVEPTW 874
Query: 539 MTASNAVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWM 598
MTASNA ER+GSELR MIQAP GY+I+GADVDSQELWIASVIGD++ + HGATP GWM
Sbjct: 875 MTASNAHVERIGSELRCMIQAPPGYNIVGADVDSQELWIASVIGDAHYKRIHGATPFGWM 934
Query: 599 TLSGQKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAK 658
TL G KSN TDMHS+TAKA+GISR+HAK+INYARIYGAG++FAERLLKQFNP M+ ++A
Sbjct: 935 TLIGTKSNGTDMHSVTAKAIGISRDHAKVINYARIYGAGQKFAERLLKQFNPSMTDAEAI 994
Query: 659 SKARKMYTLTKGKKLYRLKDGHLEELIKRV-YSKYEAREVCSAYNTSVDKIFDKPQWYGG 717
SK+RKM+ LTKGKK+YRLK + + ++ + Y+ +A + + + IF K +W G
Sbjct: 995 SKSRKMFALTKGKKIYRLKTEFINDDLQNISYTSSQAYHIAKLHGKGLQDIFQKSEWIDG 1054
Query: 718 TESAMFNRLEEIATSLQPVTPFLNCRLSRALEPV-SEDDSKFIQTRINWVVQSGAVDFLH 776
+ESAMFNRLE+IA S P+TPFLN RLSRALE ++DD KF+ T+INWVVQSGAVDFLH
Sbjct: 1055 SESAMFNRLEQIAGSEHPITPFLNARLSRALEITNTDDDDKFLPTKINWVVQSGAVDFLH 1114
Query: 777 LMLVCMRWLVSRDTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDI 836
LMLV MRWL+ + RF +S HDE+RYLVP KY ALA+HVTNL+TRAFC +L M D+
Sbjct: 1115 LMLVSMRWLMKDNARFCLSFHDEVRYLVPSRYKYNAALAMHVTNLMTRAFCASRLGMRDL 1174
Query: 837 PLSISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKANGVIGT 896
P+S++FF+ VE+D VLRKES +DCKTPSNP+GL GY IP GE LD++ ++K+ G +G+
Sbjct: 1175 PMSVAFFAAVEVDTVLRKESIHDCKTPSNPHGLQNGYEIPPGESLDVWAALEKSGGSLGS 1234
Query: 897 FKN 899
+ N
Sbjct: 1235 WHN 1237
>gi|195031476|ref|XP_001988346.1| GH10618 [Drosophila grimshawi]
gi|193904346|gb|EDW03213.1| GH10618 [Drosophila grimshawi]
Length = 1147
Score = 870 bits (2247), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 445/901 (49%), Positives = 578/901 (64%), Gaps = 88/901 (9%)
Query: 3 DESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLAT 62
D W SSLNSL +V++LYC G+ L K RNIFVEG+LE + + +L+ YCA D AT
Sbjct: 308 DLDWLEQSSLNSLVDVHRLYCGGEPLSKEPRNIFVEGTLEQVRQQFQSLVNYCAGDVEAT 367
Query: 63 FEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLA 122
+ + L+PL+ ERFPHPVTLA
Sbjct: 368 HRI--------------------------------------LTVLYPLYAERFPHPVTLA 389
Query: 123 GMLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDKYKDSLWL 182
GMLE+ +AYLPVN+NW +Y ++ + DLN+E K L + ++AC+LLHD++Y+ LWL
Sbjct: 390 GMLEMGSAYLPVNSNWERYIRDAQLAYEDLNIEAKYHLGRRAEEACALLHDEQYRQHLWL 449
Query: 183 WDQDWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRRELVEKFKP 242
WD+DWSV+ LKLK+ + ++ + E Q E +R L++KF+
Sbjct: 450 WDEDWSVQQLKLKQLPKR-----------KQLPTVPLQDERQLNAE----QRRLLQKFQH 494
Query: 243 LMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIPGPSL 302
L + LP L GYP+WYRKLC KP S++EL E W PG S
Sbjct: 495 LYDQRALLPARRPLLPGYPQWYRKLCQKP----PPDYSEEEL-----QQQDEPWTPGASG 545
Query: 303 ISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTDIKVPDAENIPLEQL--KQLYNN 360
IST MQI PKLLSL W+ PLH+ +GHGWG+LVP+ + ++P+EQL +
Sbjct: 546 ISTGMQIAPKLLSLCWEGYPLHYQKGHGWGFLVPFRSGDNSRQT-DLPIEQLLERCAIPE 604
Query: 361 ITKQDNCEANVDNAQNSLRDSVETNIS----FIDCSKSAKRLEVIANVLDKKKLAEASST 416
+ N D A + L VE ++ F S+ +RLE +K
Sbjct: 605 FARLYAAAENGDMAMDMLPGQVEEQLAKRQFFKKISQRQQRLE-------EKYKGSGVWC 657
Query: 417 DTSTDDADTPREIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDI---GAKRIIE 473
+ +D F+KLPHK+G VGNPLS+DF+NKFS+N+L+ D A R+IE
Sbjct: 658 NQVLEDC-----CFFLKLPHKNGPSFRVGNPLSKDFLNKFSENALSSGDPTCQAASRVIE 712
Query: 474 ISRMLSYWRNNHERVKKQFVVWLNKKDLPRRLVENIESEGRDYGVILPQLIVSGTLTRRA 533
I+RM+SYWRNN +R+ Q V+WL + LP L + E YG I PQ++V+GTLTRRA
Sbjct: 713 IARMMSYWRNNRDRILSQMVIWLPAQQLPADLRSHAERTA--YGAICPQVVVAGTLTRRA 770
Query: 534 VEATWMTASNAVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGAT 593
+E+TWMTASN+ R+GSELRAM+QAP GY ++GADVDSQELWIASV+GD+Y EHGAT
Sbjct: 771 MESTWMTASNSRANRIGSELRAMVQAPPGYKLVGADVDSQELWIASVLGDAYAHGEHGAT 830
Query: 594 PLGWMTLSGQKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMS 653
PLGWMTLSG KSN +DMHSITAK VGISR+HAK++NYARIYGAG++FAE LL+QFNP +S
Sbjct: 831 PLGWMTLSGSKSNGSDMHSITAKVVGISRDHAKVLNYARIYGAGQQFAETLLQQFNPSLS 890
Query: 654 KSDAKSKARKMYTLTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQ 713
++AK+KA KM+ TKGK++YRL++ +EL R YS YEA+ + N S+ ++F +P
Sbjct: 891 ATEAKAKAMKMFGATKGKRIYRLREEFHDELEDRTYSGYEAKRLALQRNRSIGEVFHRPS 950
Query: 714 WYGGTESAMFNRLEEIATSLQPVTPFLNCRLSRALEPVSEDD--SKFIQTRINWVVQSGA 771
W GGTESAMFNRLEEIAT QP TPFL CRLSRALE + D +F+ TR+NWVVQSGA
Sbjct: 951 WQGGTESAMFNRLEEIATREQPETPFLGCRLSRALETRGDADQEQRFLPTRVNWVVQSGA 1010
Query: 772 VDFLHLMLVCMRWLVSRDTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKL 831
VDFLHLMLV MRWL+ RF +S HDE+RYLV DE Y+ ALA+HVTNLLTR+FC K+
Sbjct: 1011 VDFLHLMLVSMRWLLGPHARFCLSFHDELRYLVKDELAYKAALAMHVTNLLTRSFCASKI 1070
Query: 832 DMTDIPLSISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKAN 891
+TD+P+S++FFS VE+D VLRKE DC+TPSNP+GL GYGI G+ L I Q+I KA
Sbjct: 1071 GLTDLPMSVAFFSSVEVDTVLRKECTMDCQTPSNPHGLQIGYGIAPGQSLSIEQSIQKAE 1130
Query: 892 G 892
G
Sbjct: 1131 G 1131
>gi|332029311|gb|EGI69294.1| DNA polymerase subunit gamma-1, mitochondrial [Acromyrmex echinatior]
Length = 1247
Score = 865 bits (2235), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/906 (49%), Positives = 591/906 (65%), Gaps = 93/906 (10%)
Query: 1 MTDESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTL 60
M E W + +SLNSL EV+KLYC G + K RN+F+EG+++DI++N+ LM+YCA D +
Sbjct: 413 MEKEIWQSTTSLNSLIEVHKLYC-GYEISKEGRNLFIEGTIKDIKDNFSMLMSYCASDVV 471
Query: 61 ATFEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVT 120
A T +++ LFPLF ERFPHPVT
Sbjct: 472 A--------------------------------------THNILRKLFPLFQERFPHPVT 493
Query: 121 LAGMLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDKYKDSL 180
LAG ELS+AYLPVN+NW +Y ES TF+DLN E K L + D C L+HD+KYK L
Sbjct: 494 LAGKPELSSAYLPVNSNWQRYLEESESTFDDLNYEAKFTLAKRADAVCYLMHDEKYKKDL 553
Query: 181 WLWDQDWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRRE----- 235
W+WDQDWS +++K+K K +K + ET I + ++Q++ +++ E
Sbjct: 554 WMWDQDWSTQNIKMKSKISKVKAASIETN-------ITEKTKEQSDTKYLSDDEEEEEDP 606
Query: 236 LVEKFKPLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEA 295
LV++F L +TK LP ++ GYP WYRKLC K S D+D
Sbjct: 607 LVKEFAYLEKTKYLLPARMPHMPGYPAWYRKLCPK-QSEDED------------------ 647
Query: 296 WIPGPSLISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTDIKVPDAEN-IPLEQL 354
W PGP ISTSMQ+ PKLL+LTW+ PLH+I+ HGWG LVPY D PD + +PLE L
Sbjct: 648 WEPGPQNISTSMQVVPKLLNLTWEKYPLHYIKDHGWGILVPYRND---PDIDTKVPLENL 704
Query: 355 KQLYNNITKQDNCEANVDNAQNSLRDSVETNISFIDCSKSAKRLEVIANVLDKKKLAEAS 414
C + + +S ID ++E + KL +
Sbjct: 705 LV---------QCPLPAPSPSRDSSNDAMATLS-IDVQNDLHKMEFWRFKKKQDKLYDEI 754
Query: 415 STDTST-DDADTPREIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIE 473
T + D F KLPHKDG + NVGNPL++DF+NKFS+N LAG+D+ A +++
Sbjct: 755 YEGTGVWCNVDIDNCCYFFKLPHKDGVNFNVGNPLAKDFLNKFSENVLAGLDVSAAEVLK 814
Query: 474 ISRMLSYWRNNHERVKKQFVVWLNKKDLPRRLVENIESEGR--DYGVILPQLIVSGTLTR 531
I+RMLSYWRNN +R+ Q V+WL+ LP N++ R YG I+PQ++VSGTLTR
Sbjct: 815 IARMLSYWRNNRDRIMSQLVIWLDNHSLP----GNVKRTKRYMRYGAIIPQVVVSGTLTR 870
Query: 532 RAVEATWMTASNAVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHG 591
RAVE TWMTASNA ER+GSELR M+QAP GY+I+GADVDSQELWIAS+IGD++ + HG
Sbjct: 871 RAVEPTWMTASNAHVERIGSELRCMVQAPPGYNIVGADVDSQELWIASIIGDAHYKRVHG 930
Query: 592 ATPLGWMTLSGQKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPE 651
ATP GWMTL G KSN TDMHS+TAKA+GISR+HAK+INYARIYGAG++FA+RLLKQFNP
Sbjct: 931 ATPFGWMTLIGTKSNGTDMHSVTAKAIGISRDHAKVINYARIYGAGQKFAQRLLKQFNPS 990
Query: 652 MSKSDAKSKARKMYTLTKGKKLYRLKDGHLEELIKRV-YSKYEAREVCSAYNTSVDKIFD 710
M+ ++A SK+RKM+ LTKGKK++ LK + + ++ + Y+ +A ++ + ++ IF
Sbjct: 991 MTDAEATSKSRKMFDLTKGKKVFWLKPEFVNDDLQDIAYTSSQAYKIAKLHGKALQDIFL 1050
Query: 711 KPQWYGGTESAMFNRLEEIATSLQPVTPFLNCRLSRALEPV-SEDDSKFIQTRINWVVQS 769
K +W GG+ESAMFNRLE+IA S PVTPFL+ RLSRALE ++DD KF+ T+INWVVQS
Sbjct: 1051 KSEWMGGSESAMFNRLEQIAGSEYPVTPFLDARLSRALEITNTDDDDKFLPTKINWVVQS 1110
Query: 770 GAVDFLHLMLVCMRWLVSRDTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIK 829
GAVDFLHLMLV MRWL+ + RF +S HDE+RYL+P + KY ALA+HVTNL+TR+FC
Sbjct: 1111 GAVDFLHLMLVSMRWLMRDNARFCLSFHDEVRYLIPFKYKYNAALAMHVTNLMTRSFCAS 1170
Query: 830 KLDMTDIPLSISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDK 889
+L M D+P+S++FF+ VE+D VLRKES +DCKTPSNP+GL GY IP GE LD++ + K
Sbjct: 1171 RLGMRDLPMSVAFFTAVEVDTVLRKESTHDCKTPSNPHGLQNGYEIPPGESLDVWAALKK 1230
Query: 890 ANGVIG 895
+ G +G
Sbjct: 1231 SGGSLG 1236
>gi|383853612|ref|XP_003702316.1| PREDICTED: DNA polymerase subunit gamma-1, mitochondrial-like
[Megachile rotundata]
Length = 1231
Score = 859 bits (2220), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 445/887 (50%), Positives = 590/887 (66%), Gaps = 78/887 (8%)
Query: 10 SSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLATFEVIQAL 69
+SLNSL++V+K YC G +DK R++FV+G+L+DI+ ++++LMTYCAKD +A
Sbjct: 404 TSLNSLADVHKFYC-GHTIDKGSRDVFVDGTLKDIKEDFNSLMTYCAKDVIA-------- 454
Query: 70 FPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLAGMLELST 129
T+ ++ LFPLF+ RFPHPVTLAGMLELST
Sbjct: 455 ------------------------------TYNILSHLFPLFMNRFPHPVTLAGMLELST 484
Query: 130 AYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDKYKDSLWLWDQDWSV 189
AYLP+N+NW +Y NES F DLN E K +L + + C L+H++KYK+ LW+W++DWS
Sbjct: 485 AYLPINSNWQRYLNESESVFEDLNYETKVILAKRANAVCELMHNEKYKEDLWMWNEDWST 544
Query: 190 KDLKLKKKANKT-LSVDQETEEPEEFYEINKNGEDQTEDEFVKRRRELVEKFKPLMQTKD 248
++LKLKK+ +K + + + EE E + N ++DE + L ++F L +T+
Sbjct: 545 QELKLKKQYSKVNIREKCKAQNSEEKKEKSLNS---SKDENEEEEDPLEKEFAYLKETRR 601
Query: 249 RLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIPGPSLISTSMQ 308
LP ++ GYP WYRKLC P D+D W+PGP ISTSMQ
Sbjct: 602 FLPKKLPHMPGYPAWYRKLC--PKMVDED------------------WLPGPQNISTSMQ 641
Query: 309 ITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTDIKVPDAENIPL-EQLKQLYNNITKQDNC 367
I PKLL+LTW+ PLH+I+ GWG LVPY+ D+ + +PL E L Q I ++
Sbjct: 642 IAPKLLNLTWEHYPLHYIKEKGWGILVPYNNDLSI--KTKVPLKELLTQCPLPII--ESS 697
Query: 368 EANVDNAQNSLRDSVETNISFIDCSKSAKRLEVIANVLDKKKLAEASSTDTSTDDADTPR 427
+ A +L VE ++ + ++ K+ + LD A D + DD
Sbjct: 698 SNGTEYAMLNLDKDVENDLHKTEFWRNKKKKPRVQ--LDNIYKGNAIWCDVNIDDC---- 751
Query: 428 EIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEISRMLSYWRNNHER 487
F+KLPHKDG + NVGNPL++DF+NKFS+N LAG+D A I++ S+M SYWRNN +R
Sbjct: 752 -CYFLKLPHKDGTNCNVGNPLAKDFLNKFSENVLAGLDESAAEILKNSKMASYWRNNRQR 810
Query: 488 VKKQFVVWLNKKDLPRRLVENIESEGRDYGVILPQLIVSGTLTRRAVEATWMTASNAVGE 547
+ QF +W LP + + +YG ILP ++V GTLTRRAVE TWMTASN+ E
Sbjct: 811 IMSQFTIWFENHYLPNTIKNT--KKLINYGAILPVVVVCGTLTRRAVEPTWMTASNSDEE 868
Query: 548 RVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNA 607
RVGSELRAMIQAP GY+I+GADVDSQELWI+S+IGD++ K HGATP GWMTL G KSN
Sbjct: 869 RVGSELRAMIQAPPGYNIVGADVDSQELWISSLIGDAHYKKIHGATPFGWMTLMGTKSNK 928
Query: 608 TDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTL 667
TDMHS+TAKAVGISR AKIINYARIYGAG++FAERLLKQFNP M+ ++A SK+RKM+T+
Sbjct: 929 TDMHSVTAKAVGISRSQAKIINYARIYGAGQKFAERLLKQFNPRMTDAEAASKSRKMFTM 988
Query: 668 TKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQWYGGTESAMFNRLE 727
TKGKK Y+LK + EL + Y+ YEA ++ + +V ++F+K W GG+ESAMFNRLE
Sbjct: 989 TKGKKTYQLKPHFVNELEDKQYTSYEATKIAKLHGKTVQEMFEKYNWEGGSESAMFNRLE 1048
Query: 728 EIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLVCMRWLVS 787
EIA S P TPFLN RL+RALE +D K++ T++NWVVQSGAVDFLHLMLV M+WL+
Sbjct: 1049 EIANSPCPATPFLNSRLTRALEGQPNND-KYLPTKVNWVVQSGAVDFLHLMLVSMKWLMK 1107
Query: 788 RDTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIPLSISFFSGVE 847
+ RF +S HDE+RYLV KY ALA+HVTNLLTR+FC ++ M D+P+S++FFS VE
Sbjct: 1108 DNVRFCLSFHDEVRYLVQSRYKYNAALAMHVTNLLTRSFCASRVGMKDLPMSVAFFSSVE 1167
Query: 848 IDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKANGVI 894
+D VLRKES+NDCKTPSNP+GL GY IP+GE LD++ I+K+ G I
Sbjct: 1168 VDTVLRKESENDCKTPSNPHGLKNGYEIPVGESLDVWTAIEKSKGRI 1214
>gi|194761126|ref|XP_001962783.1| GF15619 [Drosophila ananassae]
gi|190616480|gb|EDV32004.1| GF15619 [Drosophila ananassae]
Length = 1134
Score = 858 bits (2217), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 443/899 (49%), Positives = 579/899 (64%), Gaps = 87/899 (9%)
Query: 3 DESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLAT 62
D W + SSLNSL EV++LYC G+ L K RNIFVEG+LE + ++ +L+ YCA D AT
Sbjct: 308 DLGWLDKSSLNSLVEVHRLYCGGEPLSKEPRNIFVEGTLEQVRQHFQSLVNYCASDVEAT 367
Query: 63 FEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLA 122
V +QAL+PL+ ERFPHP +LA
Sbjct: 368 HRV--------------------------------------LQALYPLYAERFPHPASLA 389
Query: 123 GMLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDKYKDSLWL 182
GMLE+ +AYLPVN+NW +Y ES T+ DLN+E K L + ++ACSLL D++Y+ +LWL
Sbjct: 390 GMLEMGSAYLPVNSNWERYIRESQLTYEDLNIEAKHHLGRRAEEACSLLLDEQYRKNLWL 449
Query: 183 WDQDWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRRELVEKFKP 242
WD+DWSV++LKLK+ ++P E +G +R L KF+
Sbjct: 450 WDEDWSVQELKLKQPPK---------QKPLPTVEQPDSGS-------TAEQRRLQAKFQY 493
Query: 243 LMQTKDRLPVNSSYLIGYPEWYRKLCVKP--HSADKDAVSKQELIHDGISDTSEAWIPGP 300
L + LP L GYP WYRKLC KP +S + D V + + E+W PGP
Sbjct: 494 LYDQRSLLPARRPLLPGYPLWYRKLCQKPPKNSQNDDEV---------LENEQESWSPGP 544
Query: 301 SLISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTDIKVPDAENIPLEQL--KQLY 358
+ IST MQI PKLLSL W+ PLH+ R GWG+LVP+ ++ E +P+EQL +
Sbjct: 545 TEISTGMQIAPKLLSLCWEGYPLHYEREQGWGFLVPFRSEGA--GNERLPIEQLLERCAV 602
Query: 359 NNITKQDNCEANVDNAQNSLRDSVETNISFIDCSKSAKRLEVIANVLDKKKLAEASSTDT 418
+Q + + A + L D +E +S D K+L L+ + +
Sbjct: 603 PEYARQQASKRESEFALDMLSDQLEQVLSKKD---HKKKLSQKQQRLEAQYQGSGVWCNK 659
Query: 419 STDDADTPREIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDI---GAKRIIEIS 475
DD F+KLPHK+G VGNPLSRDF+NKFS+N L+ D A R+IEI+
Sbjct: 660 VLDDC-----CFFLKLPHKNGPSFRVGNPLSRDFLNKFSENILSSGDPSCHAAARVIEIA 714
Query: 476 RMLSYWRNNHERVKKQFVVWLNKKDLPRRLVENIESEGRDYGVILPQLIVSGTLTRRAVE 535
RM+SYWRNN +R+ Q VVWL+ + LP + + R YG I PQ++ GTLTRRA+E
Sbjct: 715 RMMSYWRNNRDRITGQMVVWLDPEQLPPDV-----APIRAYGAICPQVVACGTLTRRAME 769
Query: 536 ATWMTASNAVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPL 595
TWMTASN+ +R+GSELR+M+QAP GY ++GADVDSQELWIASV+GD+Y EHGATPL
Sbjct: 770 PTWMTASNSRPDRLGSELRSMVQAPPGYKLVGADVDSQELWIASVLGDAYACGEHGATPL 829
Query: 596 GWMTLSGQKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKS 655
GWMTLSG KSN +DMHSITAKAVGISR+HAK+INYARIYGAG++FAE LL+QFNP S S
Sbjct: 830 GWMTLSGSKSNGSDMHSITAKAVGISRDHAKVINYARIYGAGQQFAETLLRQFNPTFSAS 889
Query: 656 DAKSKARKMYTLTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQWY 715
+AK+KA KM+++TKGK+ YRL++ +EL R YS YEA + N ++ ++F +P W
Sbjct: 890 EAKAKAMKMFSITKGKREYRLREEFHDELDDRAYSSYEASRLAIQRNRTIGEVFHRPIWQ 949
Query: 716 GGTESAMFNRLEEIATSLQPVTPFLNCRLSRALEPVSE--DDSKFIQTRINWVVQSGAVD 773
GGTESAMFNRLE+IAT QP TPFL RLSRALE S+ + +F+ TRINWVVQSGAVD
Sbjct: 950 GGTESAMFNRLEDIATQSQPQTPFLGGRLSRALEADSDPTQEQRFLPTRINWVVQSGAVD 1009
Query: 774 FLHLMLVCMRWLVSRDTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDM 833
FLHLMLV MRWL+ RF +S HDE+RYLV +E Y+ ALA+H+TNL+TR++C+ ++ +
Sbjct: 1010 FLHLMLVSMRWLMGPHVRFCLSFHDELRYLVKEEVAYKAALAMHITNLMTRSYCVSRIGL 1069
Query: 834 TDIPLSISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKANG 892
D+P+S++FFS VE+D VLRKE DCKTPSNP+GL GYGI G+ L I + ID A G
Sbjct: 1070 KDLPMSVAFFSSVEVDTVLRKECTMDCKTPSNPHGLGIGYGIKPGQSLSIAEAIDNAGG 1128
>gi|195437646|ref|XP_002066751.1| GK24652 [Drosophila willistoni]
gi|194162836|gb|EDW77737.1| GK24652 [Drosophila willistoni]
Length = 1162
Score = 858 bits (2216), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/905 (48%), Positives = 579/905 (63%), Gaps = 104/905 (11%)
Query: 3 DESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLAT 62
D W SSLNSL EV++LYC G+ L K RNIFVEG++E + N+ +L+ YCA D AT
Sbjct: 335 DLGWLEQSSLNSLVEVHRLYCGGEPLSKEPRNIFVEGTMEQVRQNFQSLVNYCAGDVEAT 394
Query: 63 FEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLA 122
+ ++ L+PL+ ERFPHP +LA
Sbjct: 395 YR--------------------------------------ILSQLYPLYAERFPHPASLA 416
Query: 123 GMLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDKYKDSLWL 182
GMLE+ +AYLPVN+NW +Y +ES T+ DL++E K L + ++ACSLLHD++YK LWL
Sbjct: 417 GMLEMGSAYLPVNSNWERYIHESQLTYEDLSIEAKYHLGRRAEEACSLLHDEQYKKHLWL 476
Query: 183 WDQDWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRRELVEKFKP 242
WD+DWSV+ LKLKK + + K E+ + F KF+
Sbjct: 477 WDEDWSVQSLKLKKAPKRK--------------PLPKMDEECSSSPFQA-------KFQH 515
Query: 243 LMQTKDRLPVNSSYLIGYPEWYRKLCVKP--HSADKDAVSKQELIHDGISDTSEAWIPGP 300
L + LP L GYP+WYRKLC KP ++++D S++E W PG
Sbjct: 516 LYDQRALLPARRPLLPGYPQWYRKLCQKPPLQTSERDLQSEEE------------WTPGA 563
Query: 301 SLISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTDIKVPDAENIPLEQLKQ---- 356
+ IST MQI PKLLSL W+ PLH+++ HGWG+LVP+ D + +++ +PLEQL Q
Sbjct: 564 TGISTGMQIAPKLLSLCWEGYPLHYLKEHGWGFLVPFRNDAR--ESQALPLEQLLQRCPV 621
Query: 357 --LYNNITKQDNCEANVDNAQNSLRDSVETNISFIDCSKSAKRLEVI--ANVLDKKKLAE 412
+ + E +D +L + + F SK ++LE + + + E
Sbjct: 622 PEFARHCASANESELALDALPRNLDEHLGRREYFKKISKRQQKLETQYKGSGVWCNHILE 681
Query: 413 ASSTDTSTDDADTPREIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDI---GAK 469
S F+KLPHK+G VGNPLSRDF+NKFS+N L+ + A
Sbjct: 682 NSCF--------------FLKLPHKNGPSYRVGNPLSRDFLNKFSENVLSSGNPSCQAAA 727
Query: 470 RIIEISRMLSYWRNNHERVKKQFVVWLNKKDLPRRLVENIESEGRDYGVILPQLIVSGTL 529
R+IEI+RM+SYWRNN +R+ Q VVWL ++ LP L +++ YG I PQ++ GTL
Sbjct: 728 RVIEIARMMSYWRNNRDRIMNQMVVWLQRECLPSGLTSHLQHT--SYGAICPQVVACGTL 785
Query: 530 TRRAVEATWMTASNAVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKE 589
TRRA+E TWMTASN+ +R+GSELRAM+QAP GY ++GADVDSQELWIASV+GD+Y E
Sbjct: 786 TRRAMEPTWMTASNSRADRLGSELRAMVQAPPGYRLVGADVDSQELWIASVLGDAYAWGE 845
Query: 590 HGATPLGWMTLSGQKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFN 649
HGATPLGWMTLSG KSN +DMHSITAKAVGISR+HAK+INYARIYGAG++FAE LL+QFN
Sbjct: 846 HGATPLGWMTLSGNKSNQSDMHSITAKAVGISRDHAKVINYARIYGAGQQFAENLLQQFN 905
Query: 650 PEMSKSDAKSKARKMYTLTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIF 709
P S S+AK+KA KM+++TKGK++YRL+D +EL R YS YEA + N + ++F
Sbjct: 906 PTFSASEAKAKAMKMFSITKGKRIYRLRDEFHDELEDRPYSGYEATRLAVQRNRPISEVF 965
Query: 710 DKPQWYGGTESAMFNRLEEIATSLQPVTPFLNCRLSRALEP--VSEDDSKFIQTRINWVV 767
+ W GGTESAMFNRLEEIAT QP TPFL CRLSRALE ++ + +F+ TRINWVV
Sbjct: 966 HRSSWQGGTESAMFNRLEEIATEAQPKTPFLGCRLSRALEADTGADQEQRFLPTRINWVV 1025
Query: 768 QSGAVDFLHLMLVCMRWLVSRDTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFC 827
QSGAVDFLHLMLV MRWL+ RF +S HDE+RYLV ++ + ALA+H+TNLLTR+FC
Sbjct: 1026 QSGAVDFLHLMLVSMRWLMGSHARFCLSFHDELRYLVREDMAPKAALAMHITNLLTRSFC 1085
Query: 828 IKKLDMTDIPLSISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTI 887
+ ++ + D+P+S++FFS VE+D VLRKE DC+TPSNP+GL GYGI GE L I + I
Sbjct: 1086 VSRIGLKDLPMSVAFFSSVEVDTVLRKECSMDCQTPSNPHGLRIGYGIQPGESLTIDKAI 1145
Query: 888 DKANG 892
+KA G
Sbjct: 1146 EKAGG 1150
>gi|195119063|ref|XP_002004051.1| GI19730 [Drosophila mojavensis]
gi|193914626|gb|EDW13493.1| GI19730 [Drosophila mojavensis]
Length = 1143
Score = 855 bits (2208), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 442/898 (49%), Positives = 577/898 (64%), Gaps = 86/898 (9%)
Query: 3 DESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLAT 62
D W SSLN+L +V++LYC G+ L K RNIFVEG+LE + + +L+ YCA D AT
Sbjct: 310 DLDWLAQSSLNNLVDVHRLYCGGEPLSKEPRNIFVEGTLEQVRQQFQSLVNYCAGDVEAT 369
Query: 63 FEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLA 122
+ + L+PL+ ERFPHPVTLA
Sbjct: 370 HRI--------------------------------------LGKLYPLYAERFPHPVTLA 391
Query: 123 GMLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDKYKDSLWL 182
GMLE+ TAYLPVN+NW +Y ++ + DL++E K L + ++AC+LLHD+KY+ +LWL
Sbjct: 392 GMLEMGTAYLPVNSNWERYIRDAQLAYEDLSIEAKYHLGRRAEEACALLHDEKYRKNLWL 451
Query: 183 WDQDWSVKDLKLKK-KANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRRELVEKFK 241
WD+DWSV+ LKLK+ K LS Q E+ + ++ L KF+
Sbjct: 452 WDEDWSVQALKLKQMPKRKQLSTVQLPEQGLDVEQLR-----------------LQRKFQ 494
Query: 242 PLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIPGPS 301
L + LP L GYP+WYRKLC KP + V++ E W PG
Sbjct: 495 YLYNQRALLPSRRPLLPGYPQWYRKLCRKPPPDYTEDVNE------------EPWTPGAC 542
Query: 302 LISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTDIKVPDAENIPLEQL--KQLYN 359
IST MQ+ KLLSL W+S PLH++R HGWG+LVP+ + + + NIP+EQL +
Sbjct: 543 DISTGMQLAAKLLSLCWESYPLHYLREHGWGFLVPFRSS-QSNRSTNIPIEQLLGRCAIP 601
Query: 360 NITKQDNCEANVDNAQNSLRDSVETNISFIDCSKSAKRLEVIANVLDKKKLAEASSTDTS 419
+Q VD A + L V+ ++S K + ++ L+K+ +
Sbjct: 602 EFARQFAVGEAVDLAMDQLPKQVDEHLSKRHFYKKISQRQL---NLEKQYKGSGVWCNHV 658
Query: 420 TDDADTPREIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDI---GAKRIIEISR 476
DD F+KLPHK+G VGNPLS+DF+NKFS+++L+ D A R+IEI+R
Sbjct: 659 IDDC-----CFFLKLPHKNGPSFRVGNPLSKDFLNKFSEHALSSGDPSCQAAARVIEIAR 713
Query: 477 MLSYWRNNHERVKKQFVVWLNKKDLPRRLVENIESEGRDYGVILPQLIVSGTLTRRAVEA 536
M+SYWRNN +R+ Q VVWL+ + LP L ++ YG ILPQ++V+GTLTRRA+E+
Sbjct: 714 MMSYWRNNRDRILGQMVVWLHSEHLPGDL--QAHAQRTSYGAILPQVVVAGTLTRRAMES 771
Query: 537 TWMTASNAVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLG 596
TWMTASN+ R+GSELR+M+QAP GY ++GADVDSQELWIASV+GD+Y EHGATPLG
Sbjct: 772 TWMTASNSRANRIGSELRSMVQAPPGYKLVGADVDSQELWIASVLGDAYAHGEHGATPLG 831
Query: 597 WMTLSGQKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSD 656
WMTLSG KSN +DMHSITAK VGISR+HAK++NYARIYGAG++FAE LL+QFNP +S ++
Sbjct: 832 WMTLSGSKSNGSDMHSITAKVVGISRDHAKVLNYARIYGAGQQFAETLLQQFNPTLSATE 891
Query: 657 AKSKARKMYTLTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQWYG 716
AK+KA KM+ TKGK++YRL++ +E + YS YEAR N SV +IF +P W G
Sbjct: 892 AKAKAMKMFAATKGKRVYRLREEFHDEQEDKAYSSYEARRFALQRNRSVSEIFHRPSWQG 951
Query: 717 GTESAMFNRLEEIATSLQPVTPFLNCRLSRALEPVSEDD--SKFIQTRINWVVQSGAVDF 774
GTESAMFNRLEEIAT QP TPFLNCRLSRAL+ E D +F+ TRINWVVQSGAVDF
Sbjct: 952 GTESAMFNRLEEIATREQPETPFLNCRLSRALDSNGEADLEQRFLPTRINWVVQSGAVDF 1011
Query: 775 LHLMLVCMRWLVSRDTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMT 834
LHLMLV MRWL+ RF +S HDE+RYLV DE + ALA+HVTNLLTR+FC ++ +
Sbjct: 1012 LHLMLVSMRWLLGPHARFCLSFHDELRYLVKDEMAPKAALAMHVTNLLTRSFCASRIGLK 1071
Query: 835 DIPLSISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKANG 892
D+P+S++FFS VE+D VLRKE DC+TPSNP+GL GYGIP G+ L I + I KA G
Sbjct: 1072 DLPMSVAFFSSVEVDTVLRKECTMDCQTPSNPHGLQIGYGIPPGQSLGIQEAIVKAGG 1129
>gi|195164742|ref|XP_002023205.1| GL21087 [Drosophila persimilis]
gi|194105290|gb|EDW27333.1| GL21087 [Drosophila persimilis]
Length = 1153
Score = 854 bits (2206), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 433/897 (48%), Positives = 571/897 (63%), Gaps = 81/897 (9%)
Query: 3 DESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLAT 62
D W SSLNSL EV++LYC G+ L K RNIFVEG+L+ + +N+ L+ YCA D AT
Sbjct: 316 DLGWLEQSSLNSLLEVHRLYCGGEALSKEPRNIFVEGTLDQVRHNFQLLVNYCAGDVEAT 375
Query: 63 FEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLA 122
V ++ L+P++ +RFPHP +LA
Sbjct: 376 HRV--------------------------------------LRVLYPMYADRFPHPASLA 397
Query: 123 GMLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDKYKDSLWL 182
GMLE+ +AYLPVN+NW +Y E+ T+ DL++E K L + ++ACSLL+D++Y+ +LWL
Sbjct: 398 GMLEMGSAYLPVNSNWERYIREAQLTYEDLSIEAKYHLGRRAEEACSLLYDEQYRSNLWL 457
Query: 183 WDQDWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRRELVEKFKP 242
WD+DW V+ LKLK+ + E EE + +R L KF+
Sbjct: 458 WDEDWGVQQLKLKQPPKRKPLPSAEREE----------------SDLSTEQRRLYAKFQH 501
Query: 243 LMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIPGPSL 302
L + LP L GYP+WYRKLC KP + K +QE E W PG S
Sbjct: 502 LYDQRSLLPARRPLLPGYPQWYRKLCRKPPTGHKTDDGEQE---------DEQWSPGASE 552
Query: 303 ISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTDIKVPDAENIPLEQL--KQLYNN 360
IST MQI PKLLSL W+ PLH+ R HGWG+LVP+ +D D IP+++L + +
Sbjct: 553 ISTGMQIAPKLLSLCWEGYPLHYQREHGWGFLVPFRSDAAGVD--RIPIKELLERCAVPD 610
Query: 361 ITKQDNCEANVDNAQNSLRDSVETNISFIDCSKSAKRLEVIANVLDKKKLAEASSTDTST 420
+Q A D A L +E +++ + K+L L+ + +
Sbjct: 611 FARQCASAAESDLAFAMLPGQLEEHLAK---RQHYKKLSQKQQRLETQYQGSGVWCNQVL 667
Query: 421 DDADTPREIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDI---GAKRIIEISRM 477
DD F+KLPHK+G VGNPLS+DF+NKFS+N L D A R+I+I+RM
Sbjct: 668 DDC-----CFFLKLPHKNGPSFRVGNPLSKDFLNKFSENVLTSGDPSCQAAARVIDIARM 722
Query: 478 LSYWRNNHERVKKQFVVWLNKKDLPRRLVENIESEGRDYGVILPQLIVSGTLTRRAVEAT 537
+SYWRNN +R+ Q VVWL K+ LP LV G+ YG I PQ++ GTLTRRA+E T
Sbjct: 723 MSYWRNNRDRIMGQMVVWLEKEYLPSELVVGGNG-GKSYGAICPQVVACGTLTRRAMEPT 781
Query: 538 WMTASNAVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGW 597
WMTASN+ R+GSELR+M+QAP GY ++GADVDSQELWIASV+GD+Y +HGATPLGW
Sbjct: 782 WMTASNSRPNRLGSELRSMVQAPPGYRLVGADVDSQELWIASVLGDAYACGQHGATPLGW 841
Query: 598 MTLSGQKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDA 657
MTLSG K+N +DMHSITAKAVGISR+HAK+INYARIYGAG++FAE LL+QFNP S S+A
Sbjct: 842 MTLSGSKANGSDMHSITAKAVGISRDHAKVINYARIYGAGQQFAETLLRQFNPTFSASEA 901
Query: 658 KSKARKMYTLTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQWYGG 717
K+KA KM+ +TKGK++YRL++ +EL R YS YEA + N ++ ++F +P W GG
Sbjct: 902 KAKAMKMFAITKGKRVYRLREEFHDELEDRAYSGYEASRLALQRNRTLGEVFHRPNWQGG 961
Query: 718 TESAMFNRLEEIATSLQPVTPFLNCRLSRALEP--VSEDDSKFIQTRINWVVQSGAVDFL 775
TESAMFNRLEEIAT QP TPFL RLSRALE E + +F+ TRINWVVQSGAVDFL
Sbjct: 962 TESAMFNRLEEIATGAQPKTPFLGGRLSRALESDGGPEQEQRFLPTRINWVVQSGAVDFL 1021
Query: 776 HLMLVCMRWLVSRDTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTD 835
HLMLV MRWL+ RF +S HDE+RYLV ++ + ALA+H+TNLLTR++C+ ++ + D
Sbjct: 1022 HLMLVSMRWLMGPHVRFCLSFHDELRYLVQEDMAAKAALAMHITNLLTRSYCVSRIGLND 1081
Query: 836 IPLSISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKANG 892
+P+S++FF+ VE+D VLRKE DC+TPSNP+GL GYGI G+ L + + IDKA G
Sbjct: 1082 LPMSVAFFASVEVDTVLRKECTMDCQTPSNPHGLRIGYGIQPGQSLSVTEAIDKAGG 1138
>gi|198473302|ref|XP_001356241.2| GA21456 [Drosophila pseudoobscura pseudoobscura]
gi|198139395|gb|EAL33303.2| GA21456 [Drosophila pseudoobscura pseudoobscura]
Length = 1153
Score = 854 bits (2206), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 432/897 (48%), Positives = 569/897 (63%), Gaps = 81/897 (9%)
Query: 3 DESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLAT 62
D W SSLNSL EV++LYC G+ L K RNIFVEG+L+ + +N+ L+ YCA D AT
Sbjct: 316 DLGWLEQSSLNSLLEVHRLYCGGEALSKEPRNIFVEGTLDQVRHNFQLLVNYCAGDVEAT 375
Query: 63 FEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLA 122
V ++ L+P++ +RFPHP +LA
Sbjct: 376 HRV--------------------------------------LRVLYPMYADRFPHPASLA 397
Query: 123 GMLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDKYKDSLWL 182
GMLE+ +AYLPVN+NW +Y E+ T+ DL++E K L + ++ACSLL+D++Y+ +LWL
Sbjct: 398 GMLEMGSAYLPVNSNWERYIREAQLTYEDLSIEAKYHLGRRAEEACSLLYDEQYRSNLWL 457
Query: 183 WDQDWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRRELVEKFKP 242
WD+DW V+ LKLK+ + E EE + +R L KF+
Sbjct: 458 WDEDWGVQQLKLKQPPKRKPLPSAEREE----------------SDLSTEQRRLYAKFQH 501
Query: 243 LMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIPGPSL 302
L + LP L GYP+WYRKLC KP + K +QE E W PG S
Sbjct: 502 LYDQRSLLPARRPLLPGYPQWYRKLCRKPPTGHKTYDGEQE---------DEQWTPGASE 552
Query: 303 ISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTDIKVPDAENIPLEQL--KQLYNN 360
IST MQI PKLLSL W+ PLH+ R HGWG+LVP+ +D IP+++L +
Sbjct: 553 ISTGMQIAPKLLSLCWEGYPLHYQREHGWGFLVPFRSD--AAGVNRIPIKELLERCAVPE 610
Query: 361 ITKQDNCEANVDNAQNSLRDSVETNISFIDCSKSAKRLEVIANVLDKKKLAEASSTDTST 420
+Q A D A L +E +++ + K+L L+ + +
Sbjct: 611 FARQCASAAESDLAFAMLPGQLEEHLAK---RQHYKKLSQKQQRLETQYQGSGVWCNQVL 667
Query: 421 DDADTPREIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDI---GAKRIIEISRM 477
DD F+KLPHK+G VGNPLS+DF+NKFS+N L D A R+I+I+RM
Sbjct: 668 DDC-----CFFLKLPHKNGPSFRVGNPLSKDFLNKFSENVLTSGDPSCQAAARVIDIARM 722
Query: 478 LSYWRNNHERVKKQFVVWLNKKDLPRRLVENIESEGRDYGVILPQLIVSGTLTRRAVEAT 537
+SYWRNN +R+ Q VVWL K+ LP LV G+ YG I PQ++ GTLTRRA+E T
Sbjct: 723 MSYWRNNRDRIMGQMVVWLEKEYLPSELVVGGNG-GKSYGAICPQVVACGTLTRRAMEPT 781
Query: 538 WMTASNAVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGW 597
WMTASN+ R+GSELR+M+QAP GY ++GADVDSQELWIASV+GD+Y +HGATPLGW
Sbjct: 782 WMTASNSRPNRLGSELRSMVQAPPGYRLVGADVDSQELWIASVLGDAYACGQHGATPLGW 841
Query: 598 MTLSGQKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDA 657
MTLSG K+N +DMHSITAKAVGISR+HAK+INYARIYGAG++FAE LL+QFNP S S+A
Sbjct: 842 MTLSGSKANGSDMHSITAKAVGISRDHAKVINYARIYGAGQQFAETLLRQFNPTFSASEA 901
Query: 658 KSKARKMYTLTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQWYGG 717
K+KA KM+ +TKGK++YRL++ +EL R YS YEA + N ++ ++F +P W GG
Sbjct: 902 KAKAMKMFAITKGKRVYRLREEFHDELEDRAYSGYEASRLALQRNRTLGEVFHRPNWQGG 961
Query: 718 TESAMFNRLEEIATSLQPVTPFLNCRLSRALEP--VSEDDSKFIQTRINWVVQSGAVDFL 775
TESAMFNRLEEIAT QP TPFL RLSRALE E + +F+ TRINWVVQSGAVDFL
Sbjct: 962 TESAMFNRLEEIATGAQPKTPFLGGRLSRALESDGGPEQEQRFLPTRINWVVQSGAVDFL 1021
Query: 776 HLMLVCMRWLVSRDTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTD 835
HLMLV MRWL+ RF +S HDE+RYLV ++ + ALA+H+TNLLTR++C+ ++ + D
Sbjct: 1022 HLMLVSMRWLMGPHVRFCLSFHDELRYLVQEDMAAKAALAMHITNLLTRSYCVSRIGLND 1081
Query: 836 IPLSISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKANG 892
+P+S++FF+ VE+D VLRKE DC+TPSNP+GL GYGI G+ L + + IDKA G
Sbjct: 1082 LPMSVAFFASVEVDTVLRKECTMDCQTPSNPHGLRIGYGIQPGQSLSVTEAIDKAGG 1138
>gi|307207302|gb|EFN85052.1| DNA polymerase subunit gamma-1, mitochondrial [Harpegnathos saltator]
Length = 1161
Score = 853 bits (2205), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 445/896 (49%), Positives = 591/896 (65%), Gaps = 73/896 (8%)
Query: 4 ESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLATF 63
+ W +SLN+L+EV+KLYC G + K R+IFVEG+LED++N+++ LM+YCA D +A
Sbjct: 314 DDWQFNTSLNNLTEVHKLYC-GYEISKQPRDIFVEGTLEDVKNDFNMLMSYCASDVVA-- 370
Query: 64 EVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLAG 123
T V+ +FPLF ERFPHPVTLAG
Sbjct: 371 ------------------------------------THNVLVNVFPLFQERFPHPVTLAG 394
Query: 124 MLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDKYKDSLWLW 183
MLEL +AYLPVN+NW +Y E+ TF+DL+ E+K L K AC L+H ++YK LW+W
Sbjct: 395 MLELGSAYLPVNSNWQRYLKEAEGTFDDLDYEVKFTLAQKAKAACQLMHGEQYKHDLWMW 454
Query: 184 DQDWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQ-TEDEFVKRRRELVEKFKP 242
DQDWS + LKLKKK +K S D +T + Y I K+ + Q D + L ++F
Sbjct: 455 DQDWSTRTLKLKKKPSKPTSTDSKTSVKK--YAIKKSDDKQYLSDGEQEEEDPLAKEFAY 512
Query: 243 LMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIPGPSL 302
L +TK LP ++ GYP WY KLC P DKD W PGP
Sbjct: 513 LEETKYLLPSRMPHMPGYPAWYGKLC--PKHGDKD------------------WAPGPHK 552
Query: 303 ISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTDIKVPDAENIPLEQLKQLYNNIT 362
ISTSM++ PKLL LTW+ PLH+IR HGWG LVPY+ D + IPL+ L T
Sbjct: 553 ISTSMKVVPKLLRLTWEKYPLHYIREHGWGILVPYNDDPNI--QTKIPLKSLLAYCPLPT 610
Query: 363 KQDNCEANVDNAQNSLRDSVETNISFIDCSKSAKRLEVIANVLDKKKLAEASSTDTSTDD 422
++A +L V+ ++ + + K + +K A+ + D+
Sbjct: 611 SNYEFRDTSNDAMTTLSADVQNDLHKTEYWRFKKNKKAKTEPYEKVYNGSATWCNVDIDN 670
Query: 423 ADTPREIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEISRMLSYWR 482
F KLPHKDG+ NVGNPLS+DF+NKFS+N LAG+D A +++ +RMLSYWR
Sbjct: 671 C-----CYFFKLPHKDGKGKNVGNPLSKDFLNKFSENVLAGLDSSATELLKNARMLSYWR 725
Query: 483 NNHERVKKQFVVWLNKKDLPRRLVENIESEGRDYGVILPQLIVSGTLTRRAVEATWMTAS 542
NN +R+ Q V+WL+ + LP + + R YG I+PQ++VSGTLTRRAVE TWMTAS
Sbjct: 726 NNRDRILSQLVIWLDDRSLPSAVTKFKRRTAR-YGTIIPQVVVSGTLTRRAVERTWMTAS 784
Query: 543 NAVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKE-HGATPLGWMTLS 601
NA ER+GSELR+M+QAP GY+I+GADVDSQELWIAS++GD++ + HGATP GWMTL
Sbjct: 785 NASPERIGSELRSMVQAPPGYNIVGADVDSQELWIASMLGDAHHSGSIHGATPFGWMTLI 844
Query: 602 GQKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKA 661
G KSN TDMHS+TAKAVGISR+HAK+INYARIYGAG++FAE+LLKQFNP M+ ++A +K+
Sbjct: 845 GTKSNGTDMHSVTAKAVGISRDHAKVINYARIYGAGQKFAEQLLKQFNPSMTDAEAAAKS 904
Query: 662 RKMYTLTKGKKLYRLKDGHLEELIKRV-YSKYEAREVCSAYNTSVDKIFDKPQWYGGTES 720
RKM+TLTKGKK++RLK + + I+ + Y+ ++A ++ Y ++ ++F + +W GG+ES
Sbjct: 905 RKMFTLTKGKKVFRLKAEFVNDNIEDIPYTSFQAYQIAKLYGKTLQEMFQRSEWVGGSES 964
Query: 721 AMFNRLEEIATSLQPVTPFLNCRLSRALEPVSED-DSKFIQTRINWVVQSGAVDFLHLML 779
AMFNRLEEIA+S +PVTPFLN RLSRALE + D D F+ T+INWVVQSGAVDFLHLML
Sbjct: 965 AMFNRLEEIASSERPVTPFLNSRLSRALEVTNTDNDDNFLPTKINWVVQSGAVDFLHLML 1024
Query: 780 VCMRWLVSRDTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIPLS 839
V MRWL+ + RF +S HDE+RYLVP KY ALA+HVTNLLTR+FC K+ M D+P+S
Sbjct: 1025 VSMRWLMRDNARFCLSFHDEVRYLVPSRYKYNAALAMHVTNLLTRSFCASKVGMRDLPMS 1084
Query: 840 ISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKANGVIG 895
++FF+ VE+D VLRKE+ +DCKTPSN +GL GY IP GE LD++ ++K+ G +G
Sbjct: 1085 VAFFTSVEVDTVLRKEAAHDCKTPSNQHGLQNGYDIPPGESLDVWTALEKSAGSLG 1140
>gi|195397702|ref|XP_002057467.1| GJ18089 [Drosophila virilis]
gi|194141121|gb|EDW57540.1| GJ18089 [Drosophila virilis]
Length = 1150
Score = 853 bits (2203), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 433/901 (48%), Positives = 577/901 (64%), Gaps = 88/901 (9%)
Query: 3 DESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLAT 62
D SW S+LN+L +V++LYC G+ L K RNIFVEG+LE + + +L+ YCA D AT
Sbjct: 311 DLSWLEQSALNNLVDVHRLYCGGEPLSKEPRNIFVEGTLEQVRQQFQSLVNYCAGDVEAT 370
Query: 63 FEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLA 122
+ + L+P+F RFPHPVTLA
Sbjct: 371 HRI--------------------------------------LTKLYPMFAARFPHPVTLA 392
Query: 123 GMLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDKYKDSLWL 182
GMLE+ +AYLPVN+NW +Y ++ T+ DL++E K L + ++AC+LLHD++Y+ LWL
Sbjct: 393 GMLEMGSAYLPVNSNWERYIRDAQLTYEDLSIEAKYHLGRRAEEACALLHDEQYRQHLWL 452
Query: 183 WDQDWSVKDLKLK----KKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRRELVE 238
WD+DWSV+ LKLK +K T+ + ++ PE+ R L
Sbjct: 453 WDEDWSVQSLKLKQLPKRKQLPTVHLLEQELNPEQ--------------------RRLQR 492
Query: 239 KFKPLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIP 298
KF+ L + LP L GYP+WYRKLC KP + D ++ + E W P
Sbjct: 493 KFQHLYDQRALLPARRPLLPGYPQWYRKLCRKPPTCYTDDQPEEANV--------EPWTP 544
Query: 299 GPSLISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTDIKVPDAENIPLEQL--KQ 356
G IST MQI PKLLSL W+ PLH+ R HGWG+LVP+ + ++ +P+EQL +
Sbjct: 545 GACDISTGMQIAPKLLSLCWEGYPLHYQREHGWGFLVPFRS-VECSGNSKLPIEQLLTRC 603
Query: 357 LYNNITKQDNCEANVDNAQNSLRDSVETNISFIDCSKSAKRLEVIANVLDKKKLAEASST 416
+Q + + A + L ++ ++S + K++ L++
Sbjct: 604 AIPEFARQYAAGEDGELAMDMLPKQIDEHLSK---RQFYKKISQRQQQLEQNYKGSGVWC 660
Query: 417 DTSTDDADTPREIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDI---GAKRIIE 473
+ DD F+KLPHK+G VGNPLS+DF+NKFS+++L+ D A R+IE
Sbjct: 661 NQVLDDC-----CFFLKLPHKNGPSFRVGNPLSKDFLNKFSEHALSSGDPTCQAAARVIE 715
Query: 474 ISRMLSYWRNNHERVKKQFVVWLNKKDLPRRLVENIESEGRDYGVILPQLIVSGTLTRRA 533
I+RM+SYWRNN +R+ Q VVWL ++LP L I ++ YG I+PQ++V+GTLTRRA
Sbjct: 716 IARMMSYWRNNQDRILGQMVVWLQAEELPSEL--RIHAKRMAYGAIVPQIVVAGTLTRRA 773
Query: 534 VEATWMTASNAVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGAT 593
+E+TWMTASN+ R+GSELR+M+QAP GY ++GADVDSQELWIASV+GD+Y EHGAT
Sbjct: 774 MESTWMTASNSRANRIGSELRSMVQAPPGYKLVGADVDSQELWIASVLGDAYAHGEHGAT 833
Query: 594 PLGWMTLSGQKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMS 653
PLGWMTLSG KSN +DMHSITAK VGISR+HAK++NYARIYGAG++FAE LL+QFNP +S
Sbjct: 834 PLGWMTLSGSKSNGSDMHSITAKVVGISRDHAKVLNYARIYGAGQQFAETLLQQFNPTLS 893
Query: 654 KSDAKSKARKMYTLTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQ 713
++AK+KA KM+ TKGK++YRL++ +E R YS YEA+ + N V ++F +P
Sbjct: 894 ATEAKAKAMKMFAATKGKRVYRLREEFHDEQEDRPYSSYEAKRLALQRNRPVGEVFHRPS 953
Query: 714 WYGGTESAMFNRLEEIATSLQPVTPFLNCRLSRALEPVSEDD--SKFIQTRINWVVQSGA 771
W+GGTESAMFNRLEEIAT QP TPFLNCRLSRALE E D +F+ TR+NWVVQSGA
Sbjct: 954 WHGGTESAMFNRLEEIATREQPETPFLNCRLSRALESHGESDQEQRFLPTRVNWVVQSGA 1013
Query: 772 VDFLHLMLVCMRWLVSRDTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKL 831
VDFLHLMLV MRWL+ RF +S HDE+RYLV DE + ALA+HVTNLLTR+FC ++
Sbjct: 1014 VDFLHLMLVSMRWLLGTHARFCLSFHDELRYLVKDELAAKAALAMHVTNLLTRSFCASRI 1073
Query: 832 DMTDIPLSISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKAN 891
+TD+P+S++FFS VE+D VLRKE DC+TPSNP+GL GYGI G+ L I I KA
Sbjct: 1074 GLTDLPMSVAFFSSVEVDTVLRKECTLDCQTPSNPHGLQIGYGISPGQSLSIEDAIAKAG 1133
Query: 892 G 892
G
Sbjct: 1134 G 1134
>gi|312381749|gb|EFR27423.1| hypothetical protein AND_05878 [Anopheles darlingi]
Length = 1735
Score = 852 bits (2202), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 455/912 (49%), Positives = 578/912 (63%), Gaps = 104/912 (11%)
Query: 3 DESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLAT 62
D W SLN+L++VY LYC GK L+K+ R+ FVEG+L+++ N+ NLM+YCA+D AT
Sbjct: 490 DSGWREQCSLNNLADVYALYC-GKRLNKSQRDTFVEGTLDEVRANFGNLMSYCAEDVRAT 548
Query: 63 FEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLA 122
V+ L +PLF ERFPHP TLA
Sbjct: 549 KAVLVKL--------------------------------------WPLFQERFPHPATLA 570
Query: 123 GMLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDKYKDSLWL 182
GMLE+ +AYLPVN +W +Y ES T++DL+ E K LL + D AC+LLH+ YK +WL
Sbjct: 571 GMLEMGSAYLPVNASWNRYLTESDLTYDDLDTEAKQLLTQRADAACALLHNQAYKRDIWL 630
Query: 183 WDQDWSVKDLKLKKKANKTLSVDQETEEP-----EEFYEINKNGEDQTEDEFVKRRRELV 237
WDQDWSV++LKLK A KT + EP E + G+ D +R L
Sbjct: 631 WDQDWSVQELKLKA-ARKTKAKPTSDNEPPTTVGRRTGERKEAGQSPDCDAEAER---LA 686
Query: 238 EKFKPLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWI 297
++F+ L DRLPV L GYP WYR LC KP +AD W
Sbjct: 687 KQFQHLYAIADRLPVRRPLLPGYPAWYRDLCSKPDTAD--------------------WR 726
Query: 298 PGP-SLISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTDIKVPDAE-----NIPL 351
PGP IST +QI PKLLSL W+ PLHFIRGHGWG+LVPY +P+ E IPL
Sbjct: 727 PGPHQRISTGLQIAPKLLSLCWEGYPLHFIRGHGWGFLVPYR---HLPNTEAQATGKIPL 783
Query: 352 EQLKQLYNNIT-KQDNCEAN-VDNAQNSLRDSVETNISFIDCSKSAKRLEVIANVLDKKK 409
EQL + +Q N D+ LR VE +IS D + +++ A +
Sbjct: 784 EQLVAACPVVELRQTTATRNESDDVLRQLRRDVEQSISRKDYYRHSRQPASKAPPI---- 839
Query: 410 LAEASSTDTSTDDADTPREIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAK 469
A + + F++LPHKDG VGNPLS+DF+ KFS+N LAG A+
Sbjct: 840 ---AYGGAGVWCNLELEGCCFFLQLPHKDGAGHRVGNPLSKDFLAKFSENVLAGDGRAAE 896
Query: 470 RIIEISRMLSYWRNNHERVKKQFVVWLNKKDLPRRLVENIESEGRDYGVILPQLIVSGTL 529
R++ I+RMLSYWRNN +R++ Q VVWLN S G D G ILPQ++V GTL
Sbjct: 897 RVVSIARMLSYWRNNRDRIRGQMVVWLNGNG----------SSGSDCGAILPQVVVCGTL 946
Query: 530 TRRAVEATWMTASNAVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDS---YC 586
TRRA E TWMTASNA ER+GSELRAM+QAP GY I+GADVDSQELWIASV+GD+ C
Sbjct: 947 TRRASEPTWMTASNAQRERIGSELRAMVQAPIGYRIVGADVDSQELWIASVLGDAGVASC 1006
Query: 587 AKEHGATPLGWMTLSGQKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLK 646
HG TP GWMTLSG K+ TDMHS+TA AVGISR+HAK+INYARIYGAG++FAERLLK
Sbjct: 1007 GALHGGTPFGWMTLSGTKATRTDMHSVTAAAVGISRDHAKVINYARIYGAGQQFAERLLK 1066
Query: 647 QFNPEMSKSDAKSKARKMYTLTKGKKLYRLKDGHLEEL--IKRVYSKYEAREVCSAYNTS 704
QFNP +S+++A+SKA KM++LTKG++LYRL++ +E R ++YEA + +N +
Sbjct: 1067 QFNPTISQAEARSKATKMFSLTKGRRLYRLREQWIETHPDAPRHCTQYEALRLARLFNHA 1126
Query: 705 VDKIFDKPQWYGGTESAMFNRLEEIATSLQPVTPFLNCRLSRALEPV---SEDDSKFIQT 761
+D++F PQW GGTES MFNRLEEIA++ +P TPFL RLSRALEP S D +F+ T
Sbjct: 1127 IDELFYPPQWCGGTESVMFNRLEEIASADRPSTPFLGGRLSRALEPEPTHSGDVDRFMPT 1186
Query: 762 RINWVVQSGAVDFLHLMLVCMRWLVSRDTRFVISIHDEIRYLVPDEEKYETALALHVTNL 821
RINWVVQSGAVDFLHLMLVCMRWL+ RF +S HDE+RYLV ++ ++ ALA+HVTNL
Sbjct: 1187 RINWVVQSGAVDFLHLMLVCMRWLMEDRVRFCLSFHDEVRYLVAEQYAHKAALAMHVTNL 1246
Query: 822 LTRAFCIKKLDMTDIPLSISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEIL 881
LTR+FC ++ D+P S++FFS VE+D+VLRKE+ DC+TPSNP+GL GY +P GE L
Sbjct: 1247 LTRSFCAHRVGFKDLPQSVAFFSTVEVDRVLRKEAHADCRTPSNPHGLEGGYQVPNGESL 1306
Query: 882 DIYQTIDKANGV 893
DIYQT+ K V
Sbjct: 1307 DIYQTLAKLGPV 1318
>gi|195338293|ref|XP_002035759.1| GM15104 [Drosophila sechellia]
gi|194129639|gb|EDW51682.1| GM15104 [Drosophila sechellia]
Length = 1145
Score = 852 bits (2200), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/897 (48%), Positives = 572/897 (63%), Gaps = 81/897 (9%)
Query: 3 DESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLAT 62
D W SSLNSL EV++LYC G L K RNIFVEG+LE + ++ +L YCA D AT
Sbjct: 311 DLGWLEQSSLNSLVEVHRLYCGGDALSKEPRNIFVEGTLEQVRQSFQSLTNYCASDVEAT 370
Query: 63 FEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLA 122
+ ++ L+PL+ ERFPHP +LA
Sbjct: 371 HRI--------------------------------------LRVLYPLYAERFPHPASLA 392
Query: 123 GMLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDKYKDSLWL 182
GMLE+ +AYLPVN+NW +Y E+ T+ DL++E K L + ++ACSLL DD+Y+ +LWL
Sbjct: 393 GMLEMGSAYLPVNSNWERYIREAQLTYEDLSIEAKYHLGRRAEEACSLLLDDQYRQNLWL 452
Query: 183 WDQDWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRRELVEKFKP 242
WD+DWSV++LKLK+ + +P E+ +G E R L KF+
Sbjct: 453 WDEDWSVQELKLKQPPKR---------KPLPTVELKDSGNTPEE-------RRLQAKFQH 496
Query: 243 LMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIPGPSL 302
L + LP L GYP WYRKLC KP + D + + D E W PG S
Sbjct: 497 LYDQQALLPARRPLLPGYPLWYRKLCRKPPAKRADEI---------LEDDEEPWFPGASE 547
Query: 303 ISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTDIKVPDAENIPLEQL--KQLYNN 360
IST MQI PKLLSL W+ PLHF R GWG+LVP+ +D + D +P++QL +
Sbjct: 548 ISTGMQIAPKLLSLCWEGYPLHFEREQGWGFLVPFRSDSEGVD--RLPMDQLLARCPVPE 605
Query: 361 ITKQDNCEANVDNAQNSLRDSVETNISFIDCSKSAKRLEVIANVLDKKKLAEASSTDTST 420
+ +A D A + L VE ++ + K+L L+ + +
Sbjct: 606 FARLSASKAESDMAFDMLPGQVEQHLGK---REHYKKLSQKQQRLETQYQGSGVWCNKVL 662
Query: 421 DDADTPREIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDI---GAKRIIEISRM 477
DD F+KLPHK+G VGNPLS+DF+NKF++N L+ D A R+I+I+RM
Sbjct: 663 DDC-----CFFLKLPHKNGPSFRVGNPLSKDFLNKFAENVLSSGDPSCQAAARVIDIARM 717
Query: 478 LSYWRNNHERVKKQFVVWLNKKDLPRRLVENIESEGRDYGVILPQLIVSGTLTRRAVEAT 537
+SYWRNN +R+ Q VVWL+ + LP L +S+ YG I PQ++ GTLTRRA+E T
Sbjct: 718 MSYWRNNRDRIMGQMVVWLDPQQLPDELTVE-KSQPIAYGAICPQVVACGTLTRRAMEPT 776
Query: 538 WMTASNAVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGW 597
WMTASN+ +R+GSELR+M+QAP GY ++GADVDSQELWIASV+GD+Y EHGATPLGW
Sbjct: 777 WMTASNSRPDRLGSELRSMVQAPPGYRLVGADVDSQELWIASVLGDAYACGEHGATPLGW 836
Query: 598 MTLSGQKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDA 657
MTLSG KSN +DMHSITAKAVGISR+HAK+INYARIYGAG+ FAE LL+QFNP S S+A
Sbjct: 837 MTLSGSKSNGSDMHSITAKAVGISRDHAKVINYARIYGAGQLFAETLLRQFNPTFSASEA 896
Query: 658 KSKARKMYTLTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQWYGG 717
K+KA KM+++TKGK++YRL++ +EL R YS YEA + N +V ++F +P W GG
Sbjct: 897 KAKAMKMFSITKGKRVYRLREEFHDELDDRAYSSYEASRLAIQRNRTVAEVFHRPNWQGG 956
Query: 718 TESAMFNRLEEIATSLQPVTPFLNCRLSRALEPVSEDD--SKFIQTRINWVVQSGAVDFL 775
TESAMFNRLEEIAT QP TPFL RLSRALE + D +F+ TRINWVVQSGAVDFL
Sbjct: 957 TESAMFNRLEEIATGSQPRTPFLGGRLSRALEADTGPDQEQRFLPTRINWVVQSGAVDFL 1016
Query: 776 HLMLVCMRWLVSRDTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTD 835
HLMLV MRWL+ RF +S HDE+RYLV +E + ALA+H+TNL+TR+FC+ ++ + D
Sbjct: 1017 HLMLVSMRWLMGSHVRFCLSFHDELRYLVKEELSPKAALAMHITNLMTRSFCVSRIGLQD 1076
Query: 836 IPLSISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKANG 892
+P+S++FFS VE+D VLRKE DCKTPSNP+GL GYGI G+ L + + I++A G
Sbjct: 1077 LPMSVAFFSSVEVDTVLRKECTMDCKTPSNPHGLRIGYGIQPGQSLSVAEAIEEAGG 1133
>gi|194860399|ref|XP_001969574.1| GG10182 [Drosophila erecta]
gi|190661441|gb|EDV58633.1| GG10182 [Drosophila erecta]
Length = 1142
Score = 851 bits (2199), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/901 (48%), Positives = 569/901 (63%), Gaps = 92/901 (10%)
Query: 3 DESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLAT 62
D W SSLNSL +V++LYC G L K RNIFVEG+LE + ++ +L YCA D AT
Sbjct: 311 DLGWLEQSSLNSLVDVHRLYCGGDALSKEPRNIFVEGTLEQVRQSFQSLTNYCASDVEAT 370
Query: 63 FEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLA 122
+ ++ L+PL+ +RFPHP +LA
Sbjct: 371 HRI--------------------------------------LRVLYPLYADRFPHPASLA 392
Query: 123 GMLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDKYKDSLWL 182
GMLE+ +AYLPVN+NW +Y E+ T+ DL++E K L + ++ACSLL DD+Y+ +LWL
Sbjct: 393 GMLEMGSAYLPVNSNWERYIREAQLTYEDLSIEAKYHLGRRAEEACSLLLDDQYRQNLWL 452
Query: 183 WDQDWSVKDLKLKKKANK----TLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRRELVE 238
WD+DWSV++LKLK+ + T+ V PEE R L
Sbjct: 453 WDEDWSVQELKLKQPPKRKPLPTVEVKYAVNTPEE--------------------RRLQA 492
Query: 239 KFKPLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIP 298
KF+ L + LP L GYP WYRKLC KP + D + + D E W P
Sbjct: 493 KFQHLYDQQALLPARRPLLPGYPLWYRKLCRKPPTKRSDEI---------LEDDEEPWFP 543
Query: 299 GPSLISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTDIKVPDAENIPLEQL--KQ 356
G S IST MQI PKLLSL W+ PLH+ R GWG+LVP+ +D + D +P+ QL +
Sbjct: 544 GASEISTGMQIAPKLLSLCWEGYPLHYEREQGWGFLVPFRSDSEGVD--RLPINQLLARC 601
Query: 357 LYNNITKQDNCEANVDNAQNSLRDSVETNISFIDCSKSAKRLEVIANVLDKKKLAEASST 416
+Q +A D A + L VE ++ + K+L L+ +
Sbjct: 602 PVPEFARQSASKAESDLAFDMLPGQVEEHLGK---REHYKKLSQKQQRLETQYQGSGVWC 658
Query: 417 DTSTDDADTPREIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDI---GAKRIIE 473
+ DD F+KLPHK+G VGNPLS+DF+NKFS+N L+ D A R+I+
Sbjct: 659 NKVLDDC-----CFFLKLPHKNGPSFRVGNPLSKDFLNKFSENVLSSGDPSCQAAARVID 713
Query: 474 ISRMLSYWRNNHERVKKQFVVWLNKKDLPRRLVENIESEGRDYGVILPQLIVSGTLTRRA 533
I+RM+SYWRNN +R+ Q VVWLN + LP L + YG I PQ++ GTLTRRA
Sbjct: 714 IARMMSYWRNNRDRILGQMVVWLNPQQLPNELT----GQPIAYGAICPQVVACGTLTRRA 769
Query: 534 VEATWMTASNAVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGAT 593
+E TWMTASN+ +R+GSELR+M+QAP GY ++GADVDSQELWIASV+GD+Y EHGAT
Sbjct: 770 MEPTWMTASNSRTDRLGSELRSMVQAPPGYRLVGADVDSQELWIASVLGDAYACGEHGAT 829
Query: 594 PLGWMTLSGQKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMS 653
PLGWMTLSG KSN +DMHSITAKAVGISR+HAK+INYARIYGAG+ FAE LL+QFNP S
Sbjct: 830 PLGWMTLSGSKSNGSDMHSITAKAVGISRDHAKVINYARIYGAGQLFAETLLRQFNPTFS 889
Query: 654 KSDAKSKARKMYTLTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQ 713
S+AK+KA KM+++TKGK++YRL++ +EL R YS YEA + N ++ ++F +P
Sbjct: 890 ASEAKAKAMKMFSITKGKRVYRLREEFHDELDDRAYSSYEASRLAIQRNRTLTEVFHRPN 949
Query: 714 WYGGTESAMFNRLEEIATSLQPVTPFLNCRLSRALEP--VSEDDSKFIQTRINWVVQSGA 771
W GGTESAMFNRLEEIAT QP TPFL RLSRALE E + +F+ TRINWVVQSGA
Sbjct: 950 WQGGTESAMFNRLEEIATGSQPRTPFLGGRLSRALEADGGPEQEQRFLPTRINWVVQSGA 1009
Query: 772 VDFLHLMLVCMRWLVSRDTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKL 831
VDFLHLMLV MRWL+ RF +S HDE+RYLV +E + ALA+H+TNL+TR+FC+ ++
Sbjct: 1010 VDFLHLMLVSMRWLMGSHVRFCLSFHDELRYLVKEEFSPKAALAMHITNLMTRSFCVSRI 1069
Query: 832 DMTDIPLSISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKAN 891
+ D+P+S++FFS VE+D VLRKE DCKTPSNP+GL GYGI G+ L + + I+KA
Sbjct: 1070 GLKDLPMSVAFFSSVEVDTVLRKECTMDCKTPSNPHGLRIGYGIQPGQSLSVAEAIEKAG 1129
Query: 892 G 892
G
Sbjct: 1130 G 1130
>gi|19527699|gb|AAL89964.1| AT02241p [Drosophila melanogaster]
Length = 1145
Score = 850 bits (2195), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/897 (48%), Positives = 571/897 (63%), Gaps = 81/897 (9%)
Query: 3 DESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLAT 62
D W SSLNSL EV++LYC G L K RNIFVEG+LE + ++ +L YCA D AT
Sbjct: 311 DLGWLEQSSLNSLVEVHRLYCGGDTLSKEPRNIFVEGTLEQVRQSFQSLTNYCASDVEAT 370
Query: 63 FEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLA 122
+ ++ L+PL+ ERFPHP +LA
Sbjct: 371 HRI--------------------------------------LRVLYPLYAERFPHPASLA 392
Query: 123 GMLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDKYKDSLWL 182
GMLE+ +AYLPVN+NW +Y E+ T+ DL++E K L + ++ACSLL DD+Y+ +LWL
Sbjct: 393 GMLEMGSAYLPVNSNWERYIREAQLTYEDLSIEAKYHLGRRAEEACSLLLDDQYRQNLWL 452
Query: 183 WDQDWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRRELVEKFKP 242
WD+DWSV++LKLK+ + +P E+ +G E R L KF+
Sbjct: 453 WDEDWSVQELKLKQPPKR---------KPLPTVELKDSGNTPEE-------RRLQAKFQH 496
Query: 243 LMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIPGPSL 302
L + LP L GYP WYRKLC KP + D + + D E W PG S
Sbjct: 497 LYDQQALLPARRPLLPGYPLWYRKLCRKPPAKRADEI---------LEDDEEPWSPGASE 547
Query: 303 ISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTDIKVPDAENIPLEQL--KQLYNN 360
IST MQI PKLLSL W+ PLH+ R GWG+LVP+ +D + D +P+EQL
Sbjct: 548 ISTGMQIAPKLLSLCWEGYPLHYEREQGWGFLVPFRSDSEGVD--RLPMEQLLAHCPVPE 605
Query: 361 ITKQDNCEANVDNAQNSLRDSVETNISFIDCSKSAKRLEVIANVLDKKKLAEASSTDTST 420
+ +A D A + L VE ++ + K+L L+ + +
Sbjct: 606 FARLSASKAESDMAFDMLPGQVEQHLGK---REHYKKLSQKQQRLETQYQGSGVWCNKVL 662
Query: 421 DDADTPREIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDI---GAKRIIEISRM 477
DD F+KLPHK+G VGNPLS+DF+NKF++N L+ D A R+I+I+RM
Sbjct: 663 DDC-----CFFLKLPHKNGPSFRVGNPLSKDFLNKFAENVLSSGDPSCQAAARVIDIARM 717
Query: 478 LSYWRNNHERVKKQFVVWLNKKDLPRRLVENIESEGRDYGVILPQLIVSGTLTRRAVEAT 537
+SYWRNN +R+ Q VVWL+ + LP + + YG I PQ++ GTLTRRA+E T
Sbjct: 718 MSYWRNNRDRIMGQMVVWLDSQQLPNEFTGE-KCQPIAYGAICPQVVACGTLTRRAMEPT 776
Query: 538 WMTASNAVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGW 597
WMTASN+ +R+GSELR+M+QAP GY ++GADVDSQELWIASV+GD+Y EHGATPLGW
Sbjct: 777 WMTASNSRPDRLGSELRSMVQAPPGYRLVGADVDSQELWIASVLGDAYACGEHGATPLGW 836
Query: 598 MTLSGQKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDA 657
MTLSG KSN +DMHSITAKAVGISR+HAK+INYARIYGAG+ FAE LL+QFNP S S+A
Sbjct: 837 MTLSGSKSNGSDMHSITAKAVGISRDHAKVINYARIYGAGQLFAETLLRQFNPTFSASEA 896
Query: 658 KSKARKMYTLTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQWYGG 717
K+KA KM+++TKGK++YRL++ +EL R YS YEA + N ++ ++F +P+W GG
Sbjct: 897 KAKAMKMFSITKGKRVYRLREEFHDELEDRAYSSYEASRLAIQRNRTLAEVFHRPKWQGG 956
Query: 718 TESAMFNRLEEIATSLQPVTPFLNCRLSRALEPVS--EDDSKFIQTRINWVVQSGAVDFL 775
TESAMFNRLEEIAT QP TPFL RLSRALE + E + +F+ TRINWVVQSGAVDFL
Sbjct: 957 TESAMFNRLEEIATGSQPRTPFLGGRLSRALEADTGPEQEQRFLPTRINWVVQSGAVDFL 1016
Query: 776 HLMLVCMRWLVSRDTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTD 835
HLMLV MRWL+ RF +S HDE+RYLV +E + ALA+H+TNL+TR+FC+ ++ + D
Sbjct: 1017 HLMLVSMRWLMGSHVRFCLSFHDELRYLVKEELSPKAALAMHITNLMTRSFCVSRIGLQD 1076
Query: 836 IPLSISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKANG 892
+P+S++FFS VE+D VLRKE DCKTPSNP+GL GYGI G+ L + + I+KA G
Sbjct: 1077 LPMSVAFFSSVEVDTVLRKECTMDCKTPSNPHGLRIGYGIQPGQSLSVAEAIEKAGG 1133
>gi|17136648|ref|NP_476821.1| tamas [Drosophila melanogaster]
gi|27923967|sp|Q27607.2|DPOG1_DROME RecName: Full=DNA polymerase subunit gamma-1, mitochondrial; AltName:
Full=Mitochondrial DNA polymerase catalytic subunit;
Short=Protein tamas; Flags: Precursor
gi|7298099|gb|AAF53338.1| tamas [Drosophila melanogaster]
gi|201065799|gb|ACH92309.1| FI06005p [Drosophila melanogaster]
Length = 1145
Score = 849 bits (2194), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/897 (48%), Positives = 570/897 (63%), Gaps = 81/897 (9%)
Query: 3 DESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLAT 62
D W SSLNSL EV++LYC G L K RNIFVEG+LE + ++ +L YCA D AT
Sbjct: 311 DLGWLEQSSLNSLVEVHRLYCGGDTLSKEPRNIFVEGTLEQVRQSFQSLTNYCASDVEAT 370
Query: 63 FEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLA 122
+ ++ L+PL+ ERFPHP +LA
Sbjct: 371 HRI--------------------------------------LRVLYPLYAERFPHPASLA 392
Query: 123 GMLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDKYKDSLWL 182
GMLE+ +AYLPVN+NW +Y E+ T+ DL++E K L + ++ACSLL DD+Y+ +LWL
Sbjct: 393 GMLEMGSAYLPVNSNWERYIREAQLTYEDLSIEAKYHLGRRAEEACSLLLDDQYRQNLWL 452
Query: 183 WDQDWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRRELVEKFKP 242
WD+DWSV++LKLK+ + +P E+ +G E R L KF+
Sbjct: 453 WDEDWSVQELKLKQPPKR---------KPLPTVELKDSGNTPEE-------RRLQAKFQH 496
Query: 243 LMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIPGPSL 302
L + LP L GYP WYRKLC KP + D + + D E W PG S
Sbjct: 497 LYDQQALLPARRPLLPGYPLWYRKLCRKPPAKRADEI---------LEDDEEPWSPGASE 547
Query: 303 ISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTDIKVPDAENIPLEQL--KQLYNN 360
IST MQI PKLLSL W+ PLH+ R GWG+LVP+ +D + D +P+EQL
Sbjct: 548 ISTGMQIAPKLLSLCWEGYPLHYEREQGWGFLVPFRSDSEGVD--RLPMEQLLAHCPVPE 605
Query: 361 ITKQDNCEANVDNAQNSLRDSVETNISFIDCSKSAKRLEVIANVLDKKKLAEASSTDTST 420
+ +A D A + L VE ++ + K+L L+ + +
Sbjct: 606 FARLSASKAESDMAFDMLPGQVEQHLGK---REHYKKLSQKQQRLETQYQGSGVWCNKVL 662
Query: 421 DDADTPREIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDI---GAKRIIEISRM 477
DD F+KLPHK+G VGNPLS+DF+NKF++N L+ D A R+I+I+RM
Sbjct: 663 DDC-----CFFLKLPHKNGPSFRVGNPLSKDFLNKFAENVLSSGDPSCQAAARVIDIARM 717
Query: 478 LSYWRNNHERVKKQFVVWLNKKDLPRRLVENIESEGRDYGVILPQLIVSGTLTRRAVEAT 537
+SYWRNN +R+ Q VVWL+ + LP + + YG I PQ++ GTLTRRA+E T
Sbjct: 718 MSYWRNNRDRIMGQMVVWLDSQQLPNEFTGE-KCQPIAYGAICPQVVACGTLTRRAMEPT 776
Query: 538 WMTASNAVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGW 597
WMTASN+ +R+GSELR+M+QAP GY ++GADVDSQELWIASV+GD+Y EHGATPLGW
Sbjct: 777 WMTASNSRPDRLGSELRSMVQAPPGYRLVGADVDSQELWIASVLGDAYACGEHGATPLGW 836
Query: 598 MTLSGQKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDA 657
MTLSG KSN +DMHSITAKAVGISR+HAK+INYARIYGAG+ FAE LL+QFNP S S+A
Sbjct: 837 MTLSGSKSNGSDMHSITAKAVGISRDHAKVINYARIYGAGQLFAETLLRQFNPTFSASEA 896
Query: 658 KSKARKMYTLTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQWYGG 717
K+KA KM+++TKGK++YRL++ +EL R YS YEA + N ++ ++F +P W GG
Sbjct: 897 KAKAMKMFSITKGKRVYRLREEFHDELEDRAYSSYEASRLAIQRNRTLAEVFHRPNWQGG 956
Query: 718 TESAMFNRLEEIATSLQPVTPFLNCRLSRALEPVS--EDDSKFIQTRINWVVQSGAVDFL 775
TESAMFNRLEEIAT QP TPFL RLSRALE + E + +F+ TRINWVVQSGAVDFL
Sbjct: 957 TESAMFNRLEEIATGSQPRTPFLGGRLSRALEADTGPEQEQRFLPTRINWVVQSGAVDFL 1016
Query: 776 HLMLVCMRWLVSRDTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTD 835
HLMLV MRWL+ RF +S HDE+RYLV +E + ALA+H+TNL+TR+FC+ ++ + D
Sbjct: 1017 HLMLVSMRWLMGSHVRFCLSFHDELRYLVKEELSPKAALAMHITNLMTRSFCVSRIGLQD 1076
Query: 836 IPLSISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKANG 892
+P+S++FFS VE+D VLRKE DCKTPSNP+GL GYGI G+ L + + I+KA G
Sbjct: 1077 LPMSVAFFSSVEVDTVLRKECTMDCKTPSNPHGLRIGYGIQPGQSLSVAEAIEKAGG 1133
>gi|1401344|gb|AAC47290.1| DNA polymerase gamma [Drosophila melanogaster]
Length = 1145
Score = 848 bits (2192), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 434/897 (48%), Positives = 571/897 (63%), Gaps = 81/897 (9%)
Query: 3 DESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLAT 62
D W SSLNSL E+++LYC G L K RNIFVEG+LE + ++ +L YCA D AT
Sbjct: 311 DLGWLEQSSLNSLVELHRLYCGGDTLSKEPRNIFVEGTLEQVRQSFQSLTNYCASDVEAT 370
Query: 63 FEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLA 122
+ ++ L+PL+ ERFPHP +LA
Sbjct: 371 HRI--------------------------------------LRVLYPLYAERFPHPASLA 392
Query: 123 GMLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDKYKDSLWL 182
GMLE+ +AYLPVN+NW +Y E+ T+ DL++E K L + ++ACSLL DD+Y+ +LWL
Sbjct: 393 GMLEMGSAYLPVNSNWERYIREAQLTYEDLSIEAKYHLGRRAEEACSLLLDDQYRQNLWL 452
Query: 183 WDQDWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRRELVEKFKP 242
WD+DWSV++LKLK+ + +P E+ +G E R L KF+
Sbjct: 453 WDEDWSVQELKLKQPPKR---------KPLPTVELKDSGNTPEE-------RRLQAKFQH 496
Query: 243 LMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIPGPSL 302
L + LP L GYP WYRKLC KP + D + + D E W PG S
Sbjct: 497 LYDQQALLPARRPLLPGYPLWYRKLCRKPPAKRADEI---------LEDDEEPWSPGASE 547
Query: 303 ISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTDIKVPDAENIPLEQL--KQLYNN 360
IST MQI PKLLSL W+ PLH+ R GWG+LVP+ +D + D +P+EQL
Sbjct: 548 ISTGMQIAPKLLSLCWEGYPLHYEREQGWGFLVPFRSDSEGVD--RLPMEQLLAHCPVPE 605
Query: 361 ITKQDNCEANVDNAQNSLRDSVETNISFIDCSKSAKRLEVIANVLDKKKLAEASSTDTST 420
+ +A D A + L VE ++ + K+L L+ + +
Sbjct: 606 FARLSASKAESDMAFDMLPGQVEQHLGK---REHYKKLSQKQQRLETQYQGSGVWCNKVL 662
Query: 421 DDADTPREIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDI---GAKRIIEISRM 477
DD F+KLPHK+G VGNPLS+DF+NKF++N L+ D A R+I+I+RM
Sbjct: 663 DDC-----CFFLKLPHKNGPSFRVGNPLSKDFLNKFAENVLSSGDPSCQAAARVIDIARM 717
Query: 478 LSYWRNNHERVKKQFVVWLNKKDLPRRLVENIESEGRDYGVILPQLIVSGTLTRRAVEAT 537
+SYWRNN +R+ Q VVWL+ + LP + + YG I PQ++ GTLTRRA+E T
Sbjct: 718 MSYWRNNRDRIMGQMVVWLDSQQLPNEFTGE-KCQPIAYGAICPQVVACGTLTRRAMEPT 776
Query: 538 WMTASNAVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGW 597
WMTASN+ +R+GSELR+M+QAP GY ++GADVDSQELWIASV+GD+Y EHGATPLGW
Sbjct: 777 WMTASNSRPDRLGSELRSMVQAPPGYRLVGADVDSQELWIASVLGDAYACGEHGATPLGW 836
Query: 598 MTLSGQKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDA 657
MTLSG KSN +DMHSITAKAVGISR+HAK+INYARIYGAG+ FAE LL+QFNP S S+A
Sbjct: 837 MTLSGSKSNGSDMHSITAKAVGISRDHAKVINYARIYGAGQLFAETLLRQFNPTFSASEA 896
Query: 658 KSKARKMYTLTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQWYGG 717
K+KA KM+++TKGK++YRL++ +EL R YS YEA + N ++ ++F +P+W GG
Sbjct: 897 KAKAMKMFSITKGKRVYRLREEFHDELEDRAYSSYEASRLAIQRNRTLAEVFHRPKWQGG 956
Query: 718 TESAMFNRLEEIATSLQPVTPFLNCRLSRALEPVS--EDDSKFIQTRINWVVQSGAVDFL 775
TESAMFNRLEEIAT QP TPFL RLSRALE + E + +F+ TRINWVVQSGAVDFL
Sbjct: 957 TESAMFNRLEEIATGSQPRTPFLGGRLSRALEADTGPEQEQRFLPTRINWVVQSGAVDFL 1016
Query: 776 HLMLVCMRWLVSRDTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTD 835
HLMLV MRWL+ RF +S HDE+RYLV +E + ALA+H+TNL+TR+FC+ ++ + D
Sbjct: 1017 HLMLVSMRWLMGSHVRFCLSFHDELRYLVKEELSPKAALAMHITNLMTRSFCVSRIGLQD 1076
Query: 836 IPLSISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKANG 892
+P+S++FFS VE+D VLRKE DCKTPSNP+GL GYGI G+ L + + I+KA G
Sbjct: 1077 LPMSVAFFSSVEVDTVLRKECTMDCKTPSNPHGLRIGYGIQPGQSLSVAEAIEKAGG 1133
>gi|195472713|ref|XP_002088644.1| GE11427 [Drosophila yakuba]
gi|194174745|gb|EDW88356.1| GE11427 [Drosophila yakuba]
Length = 1145
Score = 847 bits (2188), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/898 (48%), Positives = 573/898 (63%), Gaps = 83/898 (9%)
Query: 3 DESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLAT 62
D W SSLNSL EV++LYC G L K RNIFVEG+LE + ++ +L YCA D AT
Sbjct: 311 DLGWLEQSSLNSLVEVHRLYCGGDALSKEPRNIFVEGTLEQVRQSFQSLTNYCASDVEAT 370
Query: 63 FEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLA 122
+ ++ L+PL+ +RFPHP +LA
Sbjct: 371 HRI--------------------------------------LRVLYPLYADRFPHPASLA 392
Query: 123 GMLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDKYKDSLWL 182
GMLE+ +AYLPVN+NW +Y E+ T+ DL++E K L + ++ACSLL DD+Y+ +LWL
Sbjct: 393 GMLEMGSAYLPVNSNWERYIREAQLTYEDLSIEAKYHLGRRAEEACSLLLDDQYRQNLWL 452
Query: 183 WDQDWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRRELVEKFKP 242
WD+DWSV++LKLK+ + +P E +KN + E+ R L KF+
Sbjct: 453 WDEDWSVQELKLKQPPKR---------KPLPTVE-HKNAGNTPEE------RRLQAKFQH 496
Query: 243 LMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIPGPSL 302
L + LP L GYP WYRKLC KP + D + + D E W PG S
Sbjct: 497 LYDQQALLPARRPLLPGYPLWYRKLCRKPPTKRADEI---------LEDDEEPWFPGASE 547
Query: 303 ISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTDIKVPDAENIPLEQL--KQLYNN 360
IST MQI PKLLSL W+ PLH+ R GWG+LVP+ +D + D +P++QL +
Sbjct: 548 ISTGMQIAPKLLSLCWEGYPLHYEREQGWGFLVPFRSDSEGVD--RLPMDQLLARCPVPE 605
Query: 361 ITKQDNCEANVDNAQNSLRDSVETNISFIDCSKSAKRLEVIANVLDKKKLAEASSTDTST 420
+Q +A + A + L VE ++ + K+L L+ + +
Sbjct: 606 FARQSASKAESELALDMLPGQVEQHLGK---REHHKKLSQKQQRLETQYQGSGVWCNKVL 662
Query: 421 DDADTPREIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVD---IGAKRIIEISRM 477
DD F+KLPHK+G VGNPLS+DF+NKFS+N L+ D A R+I+I+RM
Sbjct: 663 DDC-----CFFLKLPHKNGPSFRVGNPLSKDFLNKFSENVLSSGDPSCTAAARVIDIARM 717
Query: 478 LSYWRNNHERVKKQFVVWLNKKDLPRRLV-ENIESEGRDYGVILPQLIVSGTLTRRAVEA 536
+SYWRNN +R+ Q VVWL + LP L EN + YG I PQ++ GTLTRRA+E
Sbjct: 718 MSYWRNNRDRILGQMVVWLKPQQLPNELTGENAQPIA--YGAICPQVVACGTLTRRAMEP 775
Query: 537 TWMTASNAVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLG 596
TWMTASN+ +R+GSELR+M+QAP GY ++GADVDSQELWIASV+GD+Y EHGATPLG
Sbjct: 776 TWMTASNSRPDRLGSELRSMVQAPPGYRLVGADVDSQELWIASVLGDAYACGEHGATPLG 835
Query: 597 WMTLSGQKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSD 656
WMTLSG KSN +DMHSITAKAVGISR+HAK+INYARIYGAG+ FAE LL+QFNP S S+
Sbjct: 836 WMTLSGSKSNGSDMHSITAKAVGISRDHAKVINYARIYGAGQLFAETLLRQFNPTFSASE 895
Query: 657 AKSKARKMYTLTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQWYG 716
AK+KA KM+++TKGK++YRL++ +EL R YS YEA + N ++ ++F +P W G
Sbjct: 896 AKAKAMKMFSITKGKRVYRLREEFHDELEDRAYSSYEASRLAIQRNRTLAEVFHRPNWQG 955
Query: 717 GTESAMFNRLEEIATSLQPVTPFLNCRLSRALEP--VSEDDSKFIQTRINWVVQSGAVDF 774
GTESAMFNRLEEIAT +P TPFL RLSRALE E + +F+ TRINWVVQSGAVDF
Sbjct: 956 GTESAMFNRLEEIATGSEPRTPFLGGRLSRALEADGGPEQEQRFLPTRINWVVQSGAVDF 1015
Query: 775 LHLMLVCMRWLVSRDTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMT 834
LHLMLV MRWL+ RF +S HDE+RYLV +E + ALA+H+TNL+TR+FC+ ++ +
Sbjct: 1016 LHLMLVSMRWLMGSHVRFCLSFHDELRYLVKEELSPKAALAMHITNLMTRSFCVSRIGLK 1075
Query: 835 DIPLSISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKANG 892
D+P+S++FFS VE+D VLRKE DCKTPSNP+GL GYG+ G+ L + + I+K G
Sbjct: 1076 DLPMSVAFFSSVEVDTVLRKECTMDCKTPSNPHGLRIGYGVQPGQSLSVAEAIEKGGG 1133
>gi|340710404|ref|XP_003393781.1| PREDICTED: DNA polymerase subunit gamma-1, mitochondrial-like [Bombus
terrestris]
Length = 1221
Score = 844 bits (2180), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 445/896 (49%), Positives = 584/896 (65%), Gaps = 85/896 (9%)
Query: 10 SSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLATFEVIQAL 69
+SLNSL+EV+K YC G + K R+ FV G+L +I+ +++ LM+YCA D +A
Sbjct: 402 TSLNSLAEVHKFYC-GSEITKEFRDTFVNGTLINIKEDFNYLMSYCANDVVA-------- 452
Query: 70 FPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLAGMLELST 129
T V++ LFP+F ERFPHPVTLAGMLE+ T
Sbjct: 453 ------------------------------THNVLRQLFPIFEERFPHPVTLAGMLEIGT 482
Query: 130 AYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDKYKDSLWLWDQDWSV 189
AYLP+N+NW KY NES TF DLN E K +L + + C L+H++KYK+ LW+WD+DWS
Sbjct: 483 AYLPINSNWQKYLNESETTFEDLNYETKVILAKRANAVCELMHNEKYKEDLWMWDEDWST 542
Query: 190 KDLKLKKKANKTLSVDQ--ETEEPEEFYEINKNGEDQT--EDEFVKRRRELVEKFKPLMQ 245
LK+K + +KT + Q +T + +E K E Q+ D+ + L ++F LM+
Sbjct: 543 HTLKVKAQYSKT-KIRQVCKTRQTKE----KKKTETQSYLTDDEDEEEDPLEKEFGYLME 597
Query: 246 TKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIPGPSLIST 305
T+ LP ++ GYP WYRKLC K ++D E W PGP IST
Sbjct: 598 TRKFLPSKLRHMPGYPAWYRKLCPK--------------VND------ENWSPGPQNIST 637
Query: 306 SMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTDIKVPDAENIPLEQLKQLYNNITKQD 365
S + PKLL+LTW+ PLH+++ GWG LVP++ ++ + +PL QL + + +K +
Sbjct: 638 SKHVVPKLLNLTWECYPLHYVKDKGWGILVPHTNNLDI--ETKVPLRQL-LAHCSFSKME 694
Query: 366 NCEANVDNAQNSLRDSVETNISFIDC--SKSAKRLEVIANVLDKKKLAEASSTDTSTDDA 423
+ ++ V+ N+ + K+ K + + N+ A + D+
Sbjct: 695 DLVDETMYTTLTINKEVQNNLHKTEFWRDKNEKPVPELYNIYK----GSAFWCNVDIDNC 750
Query: 424 DTPREIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEISRMLSYWRN 483
F+KLPHKDG+ NVGNPLSRDF+NKFS+N LA D A I++I+RM+SYWRN
Sbjct: 751 -----CYFLKLPHKDGKDNNVGNPLSRDFLNKFSENVLASSDASAVEILKIARMVSYWRN 805
Query: 484 NHERVKKQFVVWLNKKDLPRRLVENIESEGRDYGVILPQLIVSGTLTRRAVEATWMTASN 543
N +R+ QF VW LP V N + R YG ILP + V GTLTRRAVE TWMTASN
Sbjct: 806 NRDRIMSQFAVWFENSYLPS-TVRNSKKSMR-YGAILPIVAVCGTLTRRAVEPTWMTASN 863
Query: 544 AVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQ 603
A ERVGSELRAM+QAP GY I+GADVDSQELWI+S+IGD+Y K HGATP GWMTL G
Sbjct: 864 AHPERVGSELRAMVQAPPGYCIVGADVDSQELWISSIIGDAYYKKIHGATPFGWMTLIGT 923
Query: 604 KSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARK 663
KSN +DMHS+TAKA+GISR AKIINYARIYGAG++FAE LLKQFNP M+ S+A SK+RK
Sbjct: 924 KSNESDMHSVTAKAIGISRNQAKIINYARIYGAGQKFAETLLKQFNPCMTDSEAISKSRK 983
Query: 664 MYTLTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQWYGGTESAMF 723
M+T+TKGKK+YRLK +++E + YS YEA +V Y S+ K+F+K +W GG+ESAMF
Sbjct: 984 MFTMTKGKKVYRLKPEYIDEFENKDYSSYEAYKVSKLYGKSLSKVFEKGKWVGGSESAMF 1043
Query: 724 NRLEEIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLVCMR 783
N LEEIA + PVTPFLN RL+ ALE S ++ K++ T+INWVVQSGAVDFLHLMLV M+
Sbjct: 1044 NSLEEIAQNPHPVTPFLNSRLTTALES-STNNEKYLPTKINWVVQSGAVDFLHLMLVSMK 1102
Query: 784 WLVSRDTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIPLSISFF 843
WL+ + RF +S HDE+RYLVP KY ALA+H+TNLLTR+FC +L M D+P+S++FF
Sbjct: 1103 WLMKDNIRFCLSFHDEVRYLVPSRYKYNAALAMHITNLLTRSFCASRLGMNDLPMSVAFF 1162
Query: 844 SGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKANGVIGTFKN 899
S VE+D VLRKE DNDC TPSNPYGL GY IP GE LD++ IDK+ G +G++ N
Sbjct: 1163 SSVEVDTVLRKEPDNDCITPSNPYGLKNGYEIPSGESLDVWSAIDKSKGSLGSWHN 1218
>gi|2289912|gb|AAC47658.1| mitochondrial DNA polymerase catalytic subunit precursor [Drosophila
melanogaster]
Length = 1145
Score = 840 bits (2171), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 434/897 (48%), Positives = 570/897 (63%), Gaps = 81/897 (9%)
Query: 3 DESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLAT 62
D W S LNSL EV++LYC G L K RNIFVEG+LE + ++ +L YCA D AT
Sbjct: 311 DLGWLEQSPLNSLVEVHRLYCGGDTLSKEPRNIFVEGTLEQVRQSFQSLTNYCASDVEAT 370
Query: 63 FEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLA 122
+ ++ L+PL+ ERFPHP +LA
Sbjct: 371 HRI--------------------------------------LRVLYPLYAERFPHPASLA 392
Query: 123 GMLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDKYKDSLWL 182
GMLE+ +AYLPVN+NW +Y E+ T+ DL++E K L + ++ACSLL DD+Y+ +LWL
Sbjct: 393 GMLEMGSAYLPVNSNWERYIREAQLTYEDLSIEAKYHLGRRAEEACSLLLDDQYRQNLWL 452
Query: 183 WDQDWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRRELVEKFKP 242
WD+DWSV++LKLK+ + +P EI +G E R L KF+
Sbjct: 453 WDEDWSVQELKLKQPPKR---------KPLPTVEIKDSGNTPEE-------RRLQAKFQH 496
Query: 243 LMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIPGPSL 302
L + LP L GYP WYRKLC KP + +D + + E W PG S
Sbjct: 497 LYDQQALLPARRPLLPGYPLWYRKLCRKPPAKREDEILED---------DEEPWSPGASE 547
Query: 303 ISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTDIKVPDAENIPLEQL--KQLYNN 360
IST MQI PKLLSL W+ PLH+ R GWG+LVP+ +D + D +P+EQL +
Sbjct: 548 ISTGMQIAPKLLSLCWEGYPLHYEREQGWGFLVPFRSDSEGVD--RLPMEQLLARCPVPE 605
Query: 361 ITKQDNCEANVDNAQNSLRDSVETNISFIDCSKSAKRLEVIANVLDKKKLAEASSTDTST 420
+ +A D A + L VE ++ + K+L L+ + +
Sbjct: 606 FARLSASKAESDMAFDMLPGQVEQHLGK---REHYKKLSQKQQRLETQYQGSGVWCNKVL 662
Query: 421 DDADTPREIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDI---GAKRIIEISRM 477
DD F+KLPHK+G VGNPLS+DF+NKF++N L+ D A R+I+I+RM
Sbjct: 663 DDC-----CFFLKLPHKNGPSFRVGNPLSKDFLNKFAENVLSSGDPSCQAAARVIDIARM 717
Query: 478 LSYWRNNHERVKKQFVVWLNKKDLPRRLVENIESEGRDYGVILPQLIVSGTLTRRAVEAT 537
+SYWRNN +R+ Q VVWL+ + LP + + YG I PQ++ GTLTRRA+E T
Sbjct: 718 MSYWRNNRDRIMGQLVVWLDSQQLPNEFTGE-KCQPIAYGAICPQVVACGTLTRRAMEPT 776
Query: 538 WMTASNAVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGW 597
WMTASN+ +R+GSELR+M+QAP GY ++GADVDSQELWIASV+GD+Y EHGATPLGW
Sbjct: 777 WMTASNSRPDRLGSELRSMVQAPPGYRLVGADVDSQELWIASVLGDAYACGEHGATPLGW 836
Query: 598 MTLSGQKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDA 657
MTLSG KSN +DMHSITAKAVGISR+HAK+INYARIYGAG+ FAE LL+QFNP S S+A
Sbjct: 837 MTLSGSKSNGSDMHSITAKAVGISRDHAKVINYARIYGAGQLFAETLLRQFNPTFSASEA 896
Query: 658 KSKARKMYTLTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQWYGG 717
K+KA KM+++TKGK++YRL++ +EL R YS YEA + N ++ ++F +P W GG
Sbjct: 897 KAKAMKMFSITKGKRVYRLREEFHDELEDRAYSSYEASRLAIQRNRTLAEVFHRPNWQGG 956
Query: 718 TESAMFNRLEEIATSLQPVTPFLNCRLSRALEPVS--EDDSKFIQTRINWVVQSGAVDFL 775
TESAMFNRLEEIAT QP TPFL RLSRALE + E + +F+ TRINWVVQSGAVDFL
Sbjct: 957 TESAMFNRLEEIATGSQPRTPFLGGRLSRALEADTGPEQEQRFLPTRINWVVQSGAVDFL 1016
Query: 776 HLMLVCMRWLVSRDTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTD 835
HLMLV MRWL+ RF +S HDE+RYLV +E + ALA+H+TNL+TR+FC+ ++ + D
Sbjct: 1017 HLMLVSMRWLMGSHVRFCLSFHDELRYLVKEELSPKAALAMHITNLMTRSFCVSRIGLQD 1076
Query: 836 IPLSISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKANG 892
+P+S++FFS VE+D VLRKE DCKTPSNP+GL GYGI G+ L + + I+KA G
Sbjct: 1077 LPMSVAFFSSVEVDTVLRKECTMDCKTPSNPHGLRIGYGIQPGQSLSVAEAIEKAGG 1133
>gi|350415574|ref|XP_003490684.1| PREDICTED: DNA polymerase subunit gamma-1, mitochondrial-like [Bombus
impatiens]
Length = 1262
Score = 836 bits (2160), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 431/890 (48%), Positives = 574/890 (64%), Gaps = 73/890 (8%)
Query: 10 SSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLATFEVIQAL 69
+SLNSL+E++K YC G ++K R+ FV+G+L +++ ++++LM+YCA D +A
Sbjct: 422 TSLNSLAEIHKFYC-GSEINKKFRDTFVDGTLINVKEDFNSLMSYCANDVVA-------- 472
Query: 70 FPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLAGMLELST 129
T V++ LFP+F +RFPHPVTLAGMLE+ T
Sbjct: 473 ------------------------------THNVLRQLFPIFKKRFPHPVTLAGMLEIGT 502
Query: 130 AYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDKYKDSLWLWDQDWSV 189
AYLP+N+NW KY NES TF DLN E K +L + + C L+H++KYK+ LW+WD+DWS
Sbjct: 503 AYLPINSNWQKYLNESETTFEDLNYETKVILAKRANAVCELMHNEKYKEDLWMWDEDWST 562
Query: 190 KDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRRELVEKFKPLMQTKDR 249
+ K+K + +KT + Q + + + + D+ + L ++F LM+T+
Sbjct: 563 QTFKVKAQYSKT-KIKQVCKAQKTEEKKKTETQSYLTDDEDEEEDPLEKEFGYLMETRKF 621
Query: 250 LPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIPGPSLISTSMQI 309
LP ++ GYP WYRKLC K ++D E W PGP ISTS I
Sbjct: 622 LPSKLRHMPGYPAWYRKLCPK------------------VND--ENWSPGPQNISTSKHI 661
Query: 310 TPKLLSLTWKSMPLHFIRGHGWGYLVPYSTDIKVPDAENIPLEQLKQLYNNITKQDNCEA 369
PKLL+LTW+ PLH+++ GWG LVP++ ++ + IPL QL + +K +
Sbjct: 662 VPKLLNLTWECYPLHYVKDKGWGILVPHTNNLDI--KTKIPLRQL-LAHCLFSKMKDLVV 718
Query: 370 NVDNAQNSLRDSVETNISFIDCSKSAKRLEVIANVLDKKKLAEASSTDTSTDDADTPREI 429
+++ V+ N+ + ++ K V L A + D+
Sbjct: 719 ETIYMMSTINKEVQNNLHKTEFWRNKKEKPVAE--LHNIYKGSAFWCNVEIDNC-----C 771
Query: 430 GFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEISRMLSYWRNNHERVK 489
F+KLPHKDG+ NVGNPLS+DF+NKFS+N LA D A I++I RM+SYWRNN +R+
Sbjct: 772 YFLKLPHKDGKSNNVGNPLSKDFLNKFSENVLASSDASAAEILKIERMISYWRNNRDRIM 831
Query: 490 KQFVVWLNKKDLPRRLVENIESEGRDYGVILPQLIVSGTLTRRAVEATWMTASNAVGERV 549
QF VW LP V N R YG ILP ++V GTLTRRAVE TWMTASN ER+
Sbjct: 832 SQFAVWFENSYLPSS-VRNSRKSMR-YGAILPIVVVCGTLTRRAVEPTWMTASNVHPERI 889
Query: 550 GSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATD 609
GSELRAM+QAP GY I+GADVDSQELWI+S+IGD+Y K HGATP GWMTL G KSN TD
Sbjct: 890 GSELRAMVQAPPGYYIVGADVDSQELWISSIIGDAYYKKIHGATPFGWMTLIGTKSNETD 949
Query: 610 MHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTK 669
MHS+TAKAVGISR AKIINYARIYGAG+++AE LLKQFNP M+ S+A SK+RKM+T+TK
Sbjct: 950 MHSVTAKAVGISRNQAKIINYARIYGAGQKYAETLLKQFNPCMTDSEATSKSRKMFTMTK 1009
Query: 670 GKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQWYGGTESAMFNRLEEI 729
GKK+YRLK ++ E + YS YEA + Y S+ ++F+K +W GG+ESAMFN LEEI
Sbjct: 1010 GKKMYRLKPEYIAEHEDKDYSLYEAYRISKLYGKSLLEVFEKSRWVGGSESAMFNSLEEI 1069
Query: 730 ATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLVCMRWLVSRD 789
A + P TPFLN RL+ ALE S +D K++ T++NWVVQSGAVDFLHLMLV M+WL+ +
Sbjct: 1070 ARNPHPATPFLNSRLTTALEN-STNDEKYLPTKVNWVVQSGAVDFLHLMLVSMKWLMKDN 1128
Query: 790 TRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIPLSISFFSGVEID 849
RF +S HDE+RYLVP KY ALA+H+TNLLTR+FC +L M D+P+S++FFS VE+D
Sbjct: 1129 IRFCLSFHDEVRYLVPSRYKYNAALAMHITNLLTRSFCASRLGMNDLPMSVAFFSSVEVD 1188
Query: 850 KVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKANGVIGTFKN 899
VLRKE +NDC TPSNPYGL GY +P GE LD++ IDK+ G +G++ N
Sbjct: 1189 TVLRKEPENDCITPSNPYGLKNGYEVPSGESLDVWSAIDKSKGSLGSWHN 1238
>gi|195579078|ref|XP_002079389.1| GD22040 [Drosophila simulans]
gi|194191398|gb|EDX04974.1| GD22040 [Drosophila simulans]
Length = 1078
Score = 833 bits (2151), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 432/897 (48%), Positives = 563/897 (62%), Gaps = 96/897 (10%)
Query: 3 DESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLAT 62
D W SSLNSL EV++LYC G L K RNIFVEG+LE + ++ +L YCA D AT
Sbjct: 259 DLGWLEQSSLNSLVEVHRLYCGGDALSKEPRNIFVEGTLEQVRQSFQSLTNYCASDVEAT 318
Query: 63 FEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLA 122
+ ++ L+PL+ ERFPHP +LA
Sbjct: 319 HRI--------------------------------------LRVLYPLYAERFPHPASLA 340
Query: 123 GMLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDKYKDSLWL 182
GMLE+ +AYLPVN+NW +Y E+ T+ DL++E K L + ++ACSLL DD+Y+ +LWL
Sbjct: 341 GMLEMGSAYLPVNSNWERYIREAQLTYEDLSIEAKYHLGRRAEEACSLLLDDQYRQNLWL 400
Query: 183 WDQDWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRRELVEKFKP 242
WD+DWSV++LKLK+ + +P E+ +G E R L KF+
Sbjct: 401 WDEDWSVQELKLKQPPKR---------KPLPTVELKDSGNTPEE-------RRLQAKFQH 444
Query: 243 LMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIPGPSL 302
L + LP L GYP WYRKLC KP + D + + D E W PG S
Sbjct: 445 LYDQQALLPARRPLLPGYPLWYRKLCRKPPAKRADEI---------LEDDEEPWFPGASE 495
Query: 303 ISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTDIKVPDAENIPLEQL--KQLYNN 360
IST MQI PKLLSL W+ PLHF R GWG+LVP+ +D + D +P++QL +
Sbjct: 496 ISTGMQIAPKLLSLCWEGYPLHFEREQGWGFLVPFRSDSEGVD--RLPMDQLLARCPVPE 553
Query: 361 ITKQDNCEANVDNAQNSLRDSVETNISFIDCSKSAKRLEVIANVLDKKKLAEASSTDTST 420
+ +A D A + L VE ++ + K+L L+ + +
Sbjct: 554 FARLSASKAESDMAFDMLPGQVEQHLGK---REHYKKLSQKQQRLETQYQGSGVWCNKVL 610
Query: 421 DDADTPREIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDI---GAKRIIEISRM 477
DD F+KLPHK+G VGNPLS+DF+NKF++N L+ D A R+I+I+RM
Sbjct: 611 DDC-----CFFLKLPHKNGPSFRVGNPLSKDFLNKFAENVLSSGDPSCQAAARVIDIARM 665
Query: 478 LSYWRNNHERVKKQFVVWLNKKDLPRRLVENIESEGRDYGVILPQLIVSGTLTRRAVEAT 537
+SYWRNN +R+ Q VVWL+ + LP L +S+ YG I PQ++ GTLTRRA+E T
Sbjct: 666 MSYWRNNRDRIMGQMVVWLDPQQLPDELTVE-KSQPIAYGAICPQVVACGTLTRRAMEPT 724
Query: 538 WMTASNAVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGW 597
WMTASN+ +R+GSELR+M+QAP GY ++GADVDSQELWIASV+GD+Y EHGATPLGW
Sbjct: 725 WMTASNSRPDRLGSELRSMVQAPPGYRLVGADVDSQELWIASVLGDAYACGEHGATPLGW 784
Query: 598 MTLSGQKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDA 657
MTLSG KSN +DMHSITAKAVGISR+HAK+INYARIYGAG+ FAE LL+QFNP S S+A
Sbjct: 785 MTLSGSKSNGSDMHSITAKAVGISRDHAKVINYARIYGAGQLFAETLLRQFNPTFSASEA 844
Query: 658 KSKARKMYTLTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQWYGG 717
K+KA KM+++TKGK+ VYS YEA + N +V ++F +P W GG
Sbjct: 845 KAKAIKMFSITKGKQ---------------VYSSYEASRLAIQRNRTVAEVFHRPNWQGG 889
Query: 718 TESAMFNRLEEIATSLQPVTPFLNCRLSRALEPVSEDD--SKFIQTRINWVVQSGAVDFL 775
TESAMFNRLEEIAT QP TPFL RLSRALE + D +F+ TRINWVVQSGAVDFL
Sbjct: 890 TESAMFNRLEEIATGSQPRTPFLGGRLSRALEADTGPDQEQRFLPTRINWVVQSGAVDFL 949
Query: 776 HLMLVCMRWLVSRDTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTD 835
HLMLV MRWL+ RF +S HDE+RYLV +E + ALA+H+TNL+TR+FC+ ++ + D
Sbjct: 950 HLMLVSMRWLMGSHVRFCLSFHDELRYLVKEELSPKAALAMHITNLMTRSFCVSRIGLQD 1009
Query: 836 IPLSISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKANG 892
+P+S++FFS VE+D VLRKE DCKTPSNP+GL GYGI G+ L + + I++A G
Sbjct: 1010 LPMSVAFFSSVEVDTVLRKECTMDCKTPSNPHGLRIGYGIQPGQSLSVAEAIEEAGG 1066
>gi|380026530|ref|XP_003697003.1| PREDICTED: DNA polymerase subunit gamma-1, mitochondrial-like [Apis
florea]
Length = 1091
Score = 823 bits (2127), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 430/906 (47%), Positives = 576/906 (63%), Gaps = 109/906 (12%)
Query: 10 SSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLATFEVIQAL 69
+SLNSL++V+K YC G + K R +F+ G+L+DI++++++LM YCA D +A
Sbjct: 272 TSLNSLADVHKFYC-GSEISKNVREVFMNGTLKDIKDDFNSLMIYCANDVIA-------- 322
Query: 70 FPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLAGMLELST 129
T ++ LFP+F ERFPHPVTLAGMLEL T
Sbjct: 323 ------------------------------THNILCKLFPIFEERFPHPVTLAGMLELGT 352
Query: 130 AYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDKYKDSLWLWDQDWSV 189
AYLP+N+NW KY +ES TF DLN E K +L + + C LLH++KYK+ LW+W++DWS
Sbjct: 353 AYLPINSNWKKYLSESETTFEDLNYETKIILTKRANAVCKLLHNEKYKEDLWMWNEDWST 412
Query: 190 KDLKLKKK-ANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRRE---LVEKFKPLMQ 245
+ LK+K + + K L + + P+ + E +T+ E L ++F L +
Sbjct: 413 QMLKVKAQYSGKNLKKISQIQNPK------RKKETKTQSYLTDDEDEEDPLEKEFAYLTK 466
Query: 246 TKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIPGPSLIST 305
T+ LP ++ GYP WYRKLC K I+D E W PGP IS
Sbjct: 467 TRKFLPSKLPHMPGYPAWYRKLCFK------------------IND--ENWSPGPQNISI 506
Query: 306 SMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTDIKVPDAENIPLEQL----------- 354
S QI PKLL+LTW++ PL++I+ GWG LVP++ D+ + IPL+QL
Sbjct: 507 SKQIVPKLLNLTWENFPLYYIKDKGWGILVPHTNDLNI--ETKIPLKQLLAQCALPKKEY 564
Query: 355 --KQLYNNITKQDNCEANVDNAQNSLRDSVETNISFIDCSKSAKRLEVIANVLDKKKLAE 412
++Y T E ++ + NI + K +
Sbjct: 565 LSDEIYTMSTMNKELENDLHKTEFWYNKKKNPNIQLTNIYKGS----------------- 607
Query: 413 ASSTDTSTDDADTPREIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRII 472
A DT+ D+ F KLPHKDG++ VGNPL R F+NKFS+N LA D GA +I+
Sbjct: 608 AHWCDTNIDNC-----CYFFKLPHKDGKNCKVGNPLGRHFLNKFSENVLASSDTGAAKIL 662
Query: 473 EISRMLSYWRNNHERVKKQFVVWLNKKDLPRRLVENIESEGRDYGVILPQLIVSGTLTRR 532
+I+RM+SYWRNN +R+ QF +W K L + + +S +G ILP + VSGTLTRR
Sbjct: 663 KIARMVSYWRNNRDRIMSQFTIWFEKSYLSYGIRSSKKSMC--HGAILPLVAVSGTLTRR 720
Query: 533 AVEATWMTASNAVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGA 592
AVE TWMTASN+ ERVGSELRAMIQAP GY+I+GADVDSQELWI+S+IGD+Y K HGA
Sbjct: 721 AVEPTWMTASNSDTERVGSELRAMIQAPPGYNIVGADVDSQELWISSIIGDAYYKKIHGA 780
Query: 593 TPLGWMTLSGQKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEM 652
TP GWMTL G K+N TDMHS+TAKA+GISR AKIINYARIYGAG++FAE LLKQFNP M
Sbjct: 781 TPFGWMTLIGTKANETDMHSVTAKAIGISRNQAKIINYARIYGAGQKFAETLLKQFNPSM 840
Query: 653 SKSDAKSKARKMYTLTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKP 712
+ S+A SK+RKM+T+TKGKK+Y+LK ++++ + YS YEA ++ + + ++F+K
Sbjct: 841 TDSEASSKSRKMFTMTKGKKIYKLKPEYIDKYNDKCYSSYEAFKLSQLHGKMISEMFEKS 900
Query: 713 QWYGGTESAMFNRLEEIATSLQPVTPFLNCRLSRALEP-VSEDDSKFIQTRINWVVQSGA 771
+W GG+ESAMFNRLEEIA + PVTPFLN RL+ ALE + +D KF+ T+INWVVQSGA
Sbjct: 901 KWIGGSESAMFNRLEEIACNHHPVTPFLNSRLTAALESDETTNDEKFLPTKINWVVQSGA 960
Query: 772 VDFLHLMLVCMRWLVSRDTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKL 831
VDFLHLMLV M+WL+ RF +S HDE+RYLVP + KY ALA+H+TNLLTR+FC +L
Sbjct: 961 VDFLHLMLVSMKWLMKDHARFCLSFHDEVRYLVPSKYKYNAALAMHITNLLTRSFCASRL 1020
Query: 832 DMTDIPLSISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKAN 891
M D+P+S++FF+ VE+D VLRKE +NDC TPSNP+GL Y I GE LDI+ I+K+
Sbjct: 1021 GMNDLPMSVAFFTSVEVDTVLRKEPENDCITPSNPHGLKNEYEILPGESLDIWSAINKSK 1080
Query: 892 GVIGTF 897
G +G++
Sbjct: 1081 GSLGSW 1086
>gi|347963246|ref|XP_311006.5| AGAP000139-PA [Anopheles gambiae str. PEST]
gi|333467290|gb|EAA06413.5| AGAP000139-PA [Anopheles gambiae str. PEST]
Length = 1161
Score = 822 bits (2124), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 442/911 (48%), Positives = 558/911 (61%), Gaps = 122/911 (13%)
Query: 3 DESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLAT 62
D W+ SSLN+L++VY LYC G L K+ R+ FVEG+L+D+ ++ +LM+YCA D AT
Sbjct: 306 DAGWSEQSSLNNLADVYALYCGGPPLAKSQRDTFVEGTLQDVRADFDSLMSYCAADVRAT 365
Query: 63 FEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLA 122
V +Q L+PLF ERFPHP TLA
Sbjct: 366 GAV--------------------------------------LQRLWPLFRERFPHPATLA 387
Query: 123 GMLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDKYKDSLWL 182
GMLE+ +AYLPVN NW +Y E+ F DL++E K L + + AC LLHD Y+ LWL
Sbjct: 388 GMLEMGSAYLPVNGNWTRYLTEADLAFEDLDLESKHQLAQRAEAACGLLHDAAYRRDLWL 447
Query: 183 WDQDWSVKDLKLKK---KANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRRELVEK 239
WDQDWSV++LKLK + K + EEP G++QT L K
Sbjct: 448 WDQDWSVQELKLKAAKVEGRKGKEPGSKAEEPL------AGGDEQTR---------LANK 492
Query: 240 FKPLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIPG 299
F L T RLPV L GYP WYR LC KP + D W PG
Sbjct: 493 FAHLYATASRLPVRRPLLPGYPAWYRALCSKPTAGD--------------------WCPG 532
Query: 300 PS-LISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVP--YSTDIKV-PDAENIPLEQLK 355
PS + T MQI PKLLSL W+ PLH+IRGHGWG+LVP Y+ D + D +PLEQL
Sbjct: 533 PSGKLGTGMQIAPKLLSLCWEGYPLHYIRGHGWGFLVPFKYARDEEFEADGAALPLEQLV 592
Query: 356 QLYNNITKQDNCE--ANVDNAQNSLRDSVETNISFIDCSKSAKRLEVIANVLDKKKLAEA 413
+ + A A L VE IS D + D +
Sbjct: 593 AACPVVEPKHAAATPAESTEALAQLAKHVEQTISRKDYYRR--------KASDASRAPAP 644
Query: 414 SSTDTSTDDADTPREIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIE 473
+ + + F+KLPHKDG VGNPLS+DF+ KFS+N LAG A+R++E
Sbjct: 645 YTGSGVWCNVELEGCCYFLKLPHKDGGGHRVGNPLSKDFLAKFSENVLAGDGRAAERVVE 704
Query: 474 ISRMLSYWRNNHERVKKQFVVWLNKKDLPRRLVENIESEGRDYGVILPQLIVSGTLTRRA 533
I+RMLSYWRNN +R++ Q VVW E G I+PQ++V GTLTRRA
Sbjct: 705 IARMLSYWRNNRDRIRGQLVVWCRP------------GEPDPIGAIIPQVVVCGTLTRRA 752
Query: 534 VEATWMTASNAVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGAT 593
+E TWMTASNA ERVGSELRAM+QAP GY ++GADVDSQELWIASV+GD+ HG T
Sbjct: 753 MEPTWMTASNAQRERVGSELRAMVQAPPGYRLVGADVDSQELWIASVLGDAGTGL-HGGT 811
Query: 594 PLGWMTLSGQKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMS 653
P GWMTLSG K+ TDMHS+TA+AVGISR+HAK++NYARIYGAG++FAERLLKQFNP ++
Sbjct: 812 PFGWMTLSGTKATRTDMHSVTAQAVGISRDHAKVLNYARIYGAGQQFAERLLKQFNPTLT 871
Query: 654 KSDAKSKARKMYTLTKGKKLYRLKDGHLEELIKRVYSK------YEAREVCSAYNTSVDK 707
++A+SKA KM+TLTKG++ YRL+ EEL + ++ YEA + A + V +
Sbjct: 872 GAEARSKATKMFTLTKGRRTYRLR----EELRDQYPTQPARSTAYEALGLARACSRPVGE 927
Query: 708 IFDKPQWYGGTESAMFNRLEEIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVV 767
+F+ P W GGTESAMFNRLE+IA S +P TPFL RLSRA+EP + +F+ TRINWVV
Sbjct: 928 LFEGPHWCGGTESAMFNRLEQIAGSAEPETPFLGGRLSRAVEPQPGTEDRFLPTRINWVV 987
Query: 768 QSGAVDFLHLMLVCMRWLV---------SRDTRFVISIHDEIRYLVPDEEKYETALALHV 818
QSGAVDFLHLMLVCMRWL+ SR RF +S HDE+RYLVP+ + ALALH+
Sbjct: 988 QSGAVDFLHLMLVCMRWLMGGSDVAANSSRRLRFCLSFHDEVRYLVPERYAHHAALALHL 1047
Query: 819 TNLLTRAFCIKKLDMTDIPLSISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLG 878
TNLLTRAFC+ ++ D+P S++FFS VE+D+VLRKE+ +DC+TPSNP+GL GY IP G
Sbjct: 1048 TNLLTRAFCVHRVGFRDLPQSVAFFSSVEVDRVLRKEAQHDCRTPSNPHGLRVGYCIPDG 1107
Query: 879 EILDIYQTIDK 889
E LDIYQT+ +
Sbjct: 1108 ESLDIYQTLAR 1118
>gi|328789753|ref|XP_395230.4| PREDICTED: DNA polymerase subunit gamma-1, mitochondrial [Apis
mellifera]
Length = 1093
Score = 821 bits (2120), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 431/891 (48%), Positives = 575/891 (64%), Gaps = 81/891 (9%)
Query: 10 SSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLATFEVIQAL 69
+SLN+L++++K YC G ++K R +F+ G+L++I+ ++++LM YCA D +A
Sbjct: 273 TSLNNLADIHKFYC-GSEINKNVREVFINGTLKNIKEDFNSLMIYCANDVIA-------- 323
Query: 70 FPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLAGMLELST 129
T V+ LFP+F ERFPHPVTLAGMLEL T
Sbjct: 324 ------------------------------THNVLCKLFPIFEERFPHPVTLAGMLELGT 353
Query: 130 AYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDKYKDSLWLWDQDWSV 189
AYLP+N+NW KY NES TF DLN E K +L + + C LLH+ KYK+ LW+WD+DWS
Sbjct: 354 AYLPINSNWKKYLNESETTFEDLNYETKIVLTKRANAVCKLLHNKKYKEDLWMWDEDWST 413
Query: 190 KDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRRE---LVEKFKPLMQT 246
+ +K+K T S+ + + + + E +T+ E L +KF L +T
Sbjct: 414 QMVKVK-----TQSLKKNLKNISQIQNAKRKKETKTQSYLTDDEDEEDPLEKKFAYLTET 468
Query: 247 KDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIPGPSLISTS 306
+ LP+ ++ GYP WYRKLC K I+D E W PGP IS S
Sbjct: 469 RKFLPLKLPHMSGYPAWYRKLCFK--------------IND------ENWSPGPQNISIS 508
Query: 307 MQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTDIKVPDAENIPLEQLKQLYNNITKQDN 366
QI PKLL+LTW++ PLH+I+ GWG LVP++ D+ + IPL+QL K+
Sbjct: 509 KQIVPKLLNLTWENFPLHYIKNKGWGILVPHTNDLNI--KTKIPLKQLLAQCALPKKEYL 566
Query: 367 CEANVDNAQNSLRDSVETNISFIDCSKSAKRLEVIANVLDKKKLAEASSTDTSTDDADTP 426
+ D+ +++ +E ++ + + K+ I + K A DT+ D+
Sbjct: 567 SDEICDDTMSTMNKELEKDLHKTEFWYNKKKNPNIQSTDIYK--GSAHWCDTNIDNC--- 621
Query: 427 REIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEISRMLSYWRNNHE 486
F KLPHKDG++ NVGNPLS+ F+NKFS+N L D A I++I+RM+SYWRNN +
Sbjct: 622 --CYFFKLPHKDGKNYNVGNPLSKHFLNKFSENILGSSDRDAVEILKIARMVSYWRNNRD 679
Query: 487 RVKKQFVVWLNKKDLPRRLVENIESEGRDYGVILPQLIVSGTLTRRAVEATWMTASNAVG 546
R+ QF +W K L + + +S YG ILP + V GTLTRRAVE TWMTASN+
Sbjct: 680 RIMSQFTIWFEKSYLSCSIKSSKKSMC--YGAILPLVAVCGTLTRRAVEPTWMTASNSDT 737
Query: 547 ERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSN 606
ERVGSELRAMIQAP GY+I+GADVDSQELWI+S+IGD+Y K HGATP GWMTL G K+N
Sbjct: 738 ERVGSELRAMIQAPPGYNIVGADVDSQELWISSIIGDAYYKKIHGATPFGWMTLIGTKAN 797
Query: 607 ATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYT 666
TDMHS+TAKA+GISR AKIINYARIYGAG++FAE LLKQFNP M+ S+A K+RKM+T
Sbjct: 798 ETDMHSVTAKAIGISRNQAKIINYARIYGAGQKFAETLLKQFNPSMTDSEATLKSRKMFT 857
Query: 667 LTKGKKLYRLKDGHLEEL--IKRVYSKYEAREVCSAYNTSVDKIFDKPQWYGGTESAMFN 724
+TKGKK+Y+LK ++ ++YS YEA ++ + + ++F+K +W GG+ESAMFN
Sbjct: 858 MTKGKKIYKLKPEYINNNNDYDKLYSSYEAYKLSKLHGKIISEMFEKNKWVGGSESAMFN 917
Query: 725 RLEEIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLVCMRW 784
RLEEIA + PVTPFLN RL+ ALE S +D KF+ T+INWVVQSGAVDFLHLMLV M+W
Sbjct: 918 RLEEIACNPHPVTPFLNSRLTVALES-SVNDEKFLPTKINWVVQSGAVDFLHLMLVSMKW 976
Query: 785 LVSRDTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIPLSISFFS 844
L+ RF +S HDE+RYLVP + KY ALA+H+TNLLTR+FC +L M D+P+S++FF+
Sbjct: 977 LMKDHARFCLSFHDEVRYLVPSKYKYNAALAMHITNLLTRSFCASRLGMNDLPMSVAFFT 1036
Query: 845 GVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKANGVIG 895
VE+D VLRKE +NDC TPSNP+GL Y IP GE LDI+ IDK+ G +G
Sbjct: 1037 SVEVDTVLRKEPENDCITPSNPHGLKNEYEIPPGESLDIWSAIDKSKGSLG 1087
>gi|242009894|ref|XP_002425717.1| DNA polymerase subunit gamma, putative [Pediculus humanus corporis]
gi|212509618|gb|EEB12979.1| DNA polymerase subunit gamma, putative [Pediculus humanus corporis]
Length = 1124
Score = 754 bits (1948), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/898 (45%), Positives = 548/898 (61%), Gaps = 122/898 (13%)
Query: 7 TNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLATFEVI 66
+ V L SL ++YKLYC G+ + KT+R++FV+GS+ DI+N++ NLM+YC+KDT+
Sbjct: 330 SEVFCLISLRDMYKLYC-GREISKTERDVFVKGSILDIKNDFENLMSYCSKDTI------ 382
Query: 67 QALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLAGMLE 126
ATFE++Q +FP+FL RFPHPVTLAGMLE
Sbjct: 383 --------------------------------ATFEILQKIFPIFLNRFPHPVTLAGMLE 410
Query: 127 LSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDKYKDSLWLWDQD 186
+S A+LPV +NW K+ E+ QT+ DL EM +L K D AC L H+D++K LWLWD++
Sbjct: 411 MSVAFLPVTSNWKKFILEADQTYEDLKNEMSLILSRKSDLACRLFHNDEFKKDLWLWDEN 470
Query: 187 WSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRRELVEKFKPLMQT 246
WS+++LKL KK ++ N E T + + L EKF+ L
Sbjct: 471 WSIQNLKLTKK------------------KVPNNNE--TNVKVTAKEDALNEKFQYLFDL 510
Query: 247 KDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIPGPSLISTS 306
LP N +L GYP WYRKLC K S +H ++TS
Sbjct: 511 GKILPKNKPFLPGYPMWYRKLCEKTDSN----------VH----------------LTTS 544
Query: 307 MQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTDIKVPDAENI-PLEQLKQLYNNITKQD 365
M +TPKLL+LTW++ PL+ + HGWG LV DI + + P E+LK
Sbjct: 545 MLVTPKLLNLTWENFPLYHSKKHGWGILV---ADIFAENVNTLLPFEKLK---------- 591
Query: 366 NCEANVDNAQNSLRDSVETNISFIDCSKSAKRLEVIANVLDKKKLAEASSTDTSTDDADT 425
E + + L N+++ +C K ++ K + DD
Sbjct: 592 --EITLKSFDIPLDFYKTDNLNYKNCETKNK---LVPPFYYK---GNGIWCNHKIDDC-- 641
Query: 426 PREIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEISRMLSYWRNNH 485
F KLPHKDG NVGNPLS +F + N L G D AK++I+IS ++YWRNN
Sbjct: 642 ---CYFFKLPHKDGPLKNVGNPLSLNFTKIMASNFLCGSDGTAKKVIDISTKITYWRNNR 698
Query: 486 ERVKKQFVVWLNKKDLPRRLVENIESEGRDYGVILPQLIVSGTLTRRAVEATWMTASNAV 545
+R+K Q VVW+N+ + ++ +E G+I+P ++V+GT+TRRAVE TW+TAS
Sbjct: 699 DRIKNQMVVWMNENE---SNYPDLLNEDTSVGIIIPMVVVAGTVTRRAVERTWLTASKVS 755
Query: 546 GERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKS 605
R+GSELRA++QAP GY I+GADVDSQELWIA+++GDS AK HG TPLGWMTL G KS
Sbjct: 756 ENRIGSELRALVQAPSGYHIVGADVDSQELWIAALLGDSTYAKVHGCTPLGWMTLQGTKS 815
Query: 606 NATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMY 665
N +DMHS TAKA+GISR+HAKI+NYARIYGAG +FA++LL+QFNP +++SDA KA K+Y
Sbjct: 816 NESDMHSRTAKAIGISRDHAKILNYARIYGAGVKFAQKLLQQFNPLLNESDALKKATKIY 875
Query: 666 TLTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAY------NTSVDKIFDKPQWYGGTE 719
TKG K + ++ + + + + E ++ +AY N +IF W GTE
Sbjct: 876 QYTKGVKRFTVRP-EISKFFQERFGCLEVNDMATAYQITKILNKKFGEIFSGSHWTRGTE 934
Query: 720 SAMFNRLEEIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLML 779
S MFN+LE+IA++L+P TPFL+CRLS ALEP +D + TRINWVVQSGAVDFLHLML
Sbjct: 935 SHMFNKLEKIASALEPKTPFLSCRLSTALEPHYLNDDYHLNTRINWVVQSGAVDFLHLML 994
Query: 780 VCMRWLVSRDTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIPLS 839
VCMRWL + R+ S HDEIRYL P E+KY ALA+H+TNL R+FC +L + D+P S
Sbjct: 995 VCMRWLTNGHARYCFSFHDEIRYLFPSEQKYSGALAVHLTNLFVRSFCCHRLGIYDLPQS 1054
Query: 840 ISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKANGVIGTF 897
++FFS VE+D +LRKE+ +DC TPSNP+G+ KGYGIP GE L+IY+TI K+ G + F
Sbjct: 1055 VAFFSSVEVDTILRKEAKDDCITPSNPHGMEKGYGIPPGESLNIYETIKKSGGSLSVF 1112
>gi|345497058|ref|XP_001602202.2| PREDICTED: DNA polymerase subunit gamma-1, mitochondrial-like,
partial [Nasonia vitripennis]
Length = 1012
Score = 754 bits (1948), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/901 (45%), Positives = 539/901 (59%), Gaps = 155/901 (17%)
Query: 4 ESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLATF 63
E ++SSLNSLS+++K Y G L+K R+IF+ G ++DI+ ++ M YCA
Sbjct: 260 EHLKSISSLNSLSDIHKFYY-GFNLNKQGRDIFMNGEIQDIKKQFNESMLYCA------- 311
Query: 64 EVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLAG 123
D +AT ++ + +FP+F++RFPHP TLAG
Sbjct: 312 -------------------------------SDVVATHKIFKKMFPIFIKRFPHPATLAG 340
Query: 124 MLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDKYKDSLWLW 183
MLELST YLPVN NW +Y E+ T+ DLN E K L + D+ C L +YK+ W+W
Sbjct: 341 MLELSTTYLPVNYNWKRYLEEAETTYKDLNFENKVCLAKRADEVCRLSISSQYKNDPWMW 400
Query: 184 DQDWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRRELVEKFKPL 243
D+DWS+K++ LKK +K + T P V + L ++F+ L
Sbjct: 401 DEDWSIKNMNLKKGYDKIWKI--TTIIPVT----------------VIVKTILNKQFRYL 442
Query: 244 MQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIPGPSLI 303
+T++ LP ++ GYP WYRKLC K +K V P +
Sbjct: 443 HKTENFLPKKLPHMPGYPNWYRKLCKK----NKINV-----------------FPRTQQL 481
Query: 304 STSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTDIKVPDAENIPLEQLKQLYNNITK 363
STSM ITPKLL+LTW+ PL+ I+ HGWG+L +K L K
Sbjct: 482 STSMLITPKLLNLTWEQYPLYHIKNHGWGFL-------------------VKDLNKCDIK 522
Query: 364 QDNCEANVDNAQNSLRDSVETNISFIDCSKSAKRLEVIANVLDKKKLAEASSTDTSTDDA 423
+CE + +AK+L +
Sbjct: 523 PSDCE--------------------LLSQTTAKKLHL----------------------P 540
Query: 424 DTPREIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEISRMLSYWRN 483
D E F KLPHK+G NVG+PLS+DF+N FS N L + RIIEIS+M SYW+N
Sbjct: 541 DNKIENFFFKLPHKNGILFNVGSPLSKDFLNNFSKNILDSITTSTSRIIEISKMSSYWKN 600
Query: 484 NHERVKKQFVVWLNKKDLPRRLVENIESEGR----DYGVILPQLIVSGTLTRRAVEATWM 539
N +R+ Q V+WL+ K +N+ S+ ++G I+PQ+IVSGTLTRRAVE TWM
Sbjct: 601 NRDRILSQLVIWLDSK-------QNVNSKNSTNYINFGAIIPQVIVSGTLTRRAVEPTWM 653
Query: 540 TASNAVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCA--KEHGATPLGW 597
TASNA ER+GSELR +I AP GYSIIGADVDSQELWIAS+IGD++ K HG+TP W
Sbjct: 654 TASNAHCERIGSELRGIINAPSGYSIIGADVDSQELWIASIIGDAFKKDIKIHGSTPFSW 713
Query: 598 MTLSGQKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDA 657
MTL G KS+ TDMHS+TAKA+GI+R+ AK++NYARIYGAG++FAERLLKQFNP ++ +A
Sbjct: 714 MTLIGNKSDGTDMHSVTAKAIGINRDQAKVLNYARIYGAGQKFAERLLKQFNPSITDKEA 773
Query: 658 KSKARKMYTLTKGKKLYRLKDGHLEE-LIKRVYSKYEAREVCSAYNTSVDKIFDKPQWYG 716
K++ +Y +TKGKK YRLK ++ E L ++Y+ YEA ++ + D++F+K +W G
Sbjct: 774 ALKSKHIYLMTKGKKYYRLKKQYVSENLSNKLYTSYEAFKISQIHKKLRDEVFEKGKWIG 833
Query: 717 GTESAMFNRLEEIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLH 776
G+ES MFN LEEIA +P TPFLNCRLSRALE E + KF+ T+INWVVQSGAVDFLH
Sbjct: 834 GSESVMFNSLEEIAEQNEPSTPFLNCRLSRALE--YEKNEKFLPTKINWVVQSGAVDFLH 891
Query: 777 LMLVCMRWLVSRDTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDI 836
L+LV MRWL+ R +S HDE+RYLVP E KY ALA+HVTNLL R F + +L M D+
Sbjct: 892 LILVTMRWLMKDKARLCLSFHDEVRYLVPSEYKYNAALAMHVTNLLVRCFFVSRLKMKDL 951
Query: 837 PLSISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKANGVIGT 896
P+S++FF+ VE+D VLRKE+ DCKTPSNP+GL KGYGI GE LDI+ + K+ G +G
Sbjct: 952 PMSVAFFTSVEVDSVLRKETSQDCKTPSNPHGLKKGYGIQPGENLDIWTAVKKSKGYVGM 1011
Query: 897 F 897
F
Sbjct: 1012 F 1012
>gi|410907978|ref|XP_003967468.1| PREDICTED: DNA polymerase subunit gamma-1-like [Takifugu rubripes]
Length = 1191
Score = 745 bits (1923), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/935 (44%), Positives = 548/935 (58%), Gaps = 111/935 (11%)
Query: 6 WTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLATFEV 65
W N+SS+N+L++V+ LY G L K R FV+GSL D+ NN+ +LM YCA D AT +V
Sbjct: 318 WVNISSINNLADVHALYVGGPPLQKEARETFVKGSLRDVRNNFQDLMQYCAMDVEATHQV 377
Query: 66 IQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLAGML 125
F E+ P LF+ER PHPVT AGML
Sbjct: 378 -------FTEQLP-------------------------------LFMERCPHPVTFAGML 399
Query: 126 ELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDKYKDSLWLWDQ 185
E+ +YLPVN NW +Y +S + +L EMK LM D AC LL +D+YKD WLWD
Sbjct: 400 EMGVSYLPVNQNWGRYLEDSQDIYEELQREMKKTLMTLADDACQLLQNDRYKDDPWLWDL 459
Query: 186 DWSVKDLKLKKKA---NKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRRE--LVEKF 240
+W V++ KLKK A K + ET+ P E ++ +E+E V R VEK
Sbjct: 460 EWDVQEFKLKKMAAGRRKNSNKAVETQAPTLPPEQEEDPGPPSEEEMVAPRPSSLAVEKL 519
Query: 241 KPLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIPGP 300
K +T RLP +L G+P WYRKLC K + ++W PG
Sbjct: 520 K---ETVSRLPKRRQHLPGHPSWYRKLCEK--------------------TSVDSWSPGA 556
Query: 301 SLISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTDIKVPDAENIPLEQLKQLYNN 360
SLIS M++TPKL+ LTW PLH+ HGWGYLVP D VP E+IP
Sbjct: 557 SLISLQMRVTPKLMGLTWDGFPLHYTEKHGWGYLVPGRRDNLVPQ-EDIPGPVCPHKAIE 615
Query: 361 ITKQDNCEANVDNAQNSLRDSVETNISFIDCSKSAK-----RLEVIA---------NV-L 405
+++CE N L + ++ + + + K LE++ NV
Sbjct: 616 SVYKEHCEKNSKEQPTYLDRNGADDLEWTESAVWEKMEELDSLEILTEENGVRQPVNVGA 675
Query: 406 DKKKLAEASST-----DTSTDDADTPREIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNS 460
D + E S + +D D P F KLPHKDG NVG+P S+DF++K D +
Sbjct: 676 DPHYIPEESRCCYHHGNGPYNDVDIP-GCWFFKLPHKDGNQNNVGSPFSKDFLSKMEDGT 734
Query: 461 LAGVDIG--AKRIIEISRMLSYWRNNHERVKKQFVVWLNKKDLPRRLVENIESEGRD-YG 517
L+ G A R +EI++M+S+WRN H+R+ Q V+WL K +LP + + + + D YG
Sbjct: 735 LSAGRSGTDAARALEINKMISFWRNAHKRISSQMVLWLRKVELPHIVSRHKDFDDEDQYG 794
Query: 518 VILPQLIVSGTLTRRAVEATWMTASNAVGERVGSELRAMIQAPDGYSIIGADVDSQELWI 577
ILPQ+I +GT+TRRAVE TW+TASNA +RVGSEL+AM+Q P GY ++GADVDSQELWI
Sbjct: 795 AILPQVITAGTVTRRAVEPTWLTASNARRDRVGSELKAMVQVPPGYHLVGADVDSQELWI 854
Query: 578 ASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMHSITAKAVGISREHAKIINYARIYGAG 637
A+V+G+++ A HG T GWMTL G+KS TD+HS TA AVGISREHAK+ NY RIYGAG
Sbjct: 855 AAVLGEAHFASMHGCTAFGWMTLQGKKSQGTDLHSRTADAVGISREHAKVFNYGRIYGAG 914
Query: 638 ERFAERLLKQFNPEMSKSDAKSKARKMYTLTKGKKLYRLKDGHLEELIKRVYSKYEAREV 697
+ FAERLL QFN +S ++A +KA++MY LTKG + Y+L + E L+K + + E E
Sbjct: 915 QPFAERLLMQFNHRLSHTEAANKAKQMYALTKGVRRYQLSE-EGEWLVKELGIEVEREEN 973
Query: 698 CS------------AYNTSVDKIFD---KPQWYGGTESAMFNRLEEIATSLQPVTPFLNC 742
S A S K +D K W GGTES MFN+LE IA S QP TP L C
Sbjct: 974 GSISLQELRRITKLASQCSRRKKWDMVEKRFWSGGTESDMFNKLESIAHSAQPATPVLGC 1033
Query: 743 RLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLVCMRWLVSR---DTRFVISIHDE 799
R+SRALEP + D +FI +R+NW VQS AVD+LHLMLV M+WL D RF ISIHDE
Sbjct: 1034 RISRALEPKAVRD-EFITSRVNWAVQSSAVDYLHLMLVAMKWLCEEHDIDARFCISIHDE 1092
Query: 800 IRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIPLSISFFSGVEIDKVLRKESDND 859
+RYLV E++Y ALAL +TNLLTR+ L M D+P S++FFS V+ID+ LRKE + D
Sbjct: 1093 VRYLVSSEDRYRAALALQITNLLTRSIFAHALGMQDLPQSVAFFSSVDIDQCLRKEVNMD 1152
Query: 860 CKTPSNPYGLCKGYGIPLGEILDIYQTIDKANGVI 894
C TPSNP G+ + YGIP GE LDIYQ I+ NG +
Sbjct: 1153 CMTPSNPTGMERRYGIPPGEALDIYQIINATNGSL 1187
>gi|431920225|gb|ELK18260.1| DNA polymerase subunit gamma-1 [Pteropus alecto]
Length = 1185
Score = 741 bits (1912), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/947 (43%), Positives = 548/947 (57%), Gaps = 121/947 (12%)
Query: 6 WTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLATFEV 65
W ++SS+N+L++V+ LY G L+K R +FV+GS++DI N+ +LM YCA+D AT
Sbjct: 300 WLDISSVNNLADVHSLYVGGPSLEKEPRELFVKGSMKDIRENFQDLMQYCARDVWAT--- 356
Query: 66 IQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLAGML 125
+EV Q PLFLER PHPVTLAGML
Sbjct: 357 -----------------------------------YEVFQQQLPLFLERCPHPVTLAGML 381
Query: 126 ELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDKYKDSLWLWDQ 185
E+ +YLPVN NW +Y E+ T+ +L EMK LMD + AC L+ ++YK+ WLWD
Sbjct: 382 EMGVSYLPVNQNWERYLAEAQSTYEELQREMKKSLMDLANDACQLVSGERYKEDPWLWDL 441
Query: 186 DWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQ------TEDEFVKRRRELVEK 239
+W +++ K KK K + P E + EDQ +E+E ++R
Sbjct: 442 EWDLQEFKQKKAKVKRKEPAATSNLPVEGAGVPGYPEDQEDPGPPSEEEELRRDVTARAC 501
Query: 240 FKPLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIPG 299
F+ L T + LP +L G+P WYRKLC + + D AW PG
Sbjct: 502 FEQLKGTAELLPKRPQHLPGHPGWYRKLCPR------------------LDDP--AWTPG 541
Query: 300 PSLISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTD--IKVPDAENI-------P 350
PSL+S M+ITPKL++LTW PLHF HGWGYLVP D +VP+ + P
Sbjct: 542 PSLLSLQMRITPKLMALTWDGFPLHFSERHGWGYLVPGRRDNLAQVPEGTTLASAGVSCP 601
Query: 351 LEQLKQLYNNITKQDN----------CEANVDNAQNSLRDSVETNISFIDCSKSAKRLEV 400
++ LY ++ E + +++ +VE + F++ AK +
Sbjct: 602 YRAIESLYRKHCREQGKQQPELQAGLAEEFLLTESSAVWQTVE-ELGFLEVEAEAKVESL 660
Query: 401 IANVLDKKKLAEASSTDTST-----------DDADTPREIGFIKLPHKDGEHLNVGNPLS 449
A V + + + ++ +D D P F KLPHKDG + NVG+P +
Sbjct: 661 QAVVPGQPPVLTGAGGPKASQPAYHHGSGPYNDVDIP-GCWFFKLPHKDGNNFNVGSPFA 719
Query: 450 RDFINKFSDNSLAGVDIGAK--RIIEISRMLSYWRNNHERVKKQFVVWLNKKDLPRRLVE 507
+DF+ K D +L GA R +EI++M+S+WRN H+R+ Q VVWL + LPR +
Sbjct: 720 KDFLPKMEDGTLQAGPGGASGPRALEINKMISFWRNAHKRISSQMVVWLPRSALPRAVTR 779
Query: 508 --NIESEGRDYGVILPQLIVSGTLTRRAVEATWMTASNAVGERVGSELRAMIQAPDGYSI 565
+ + EGR YG ILPQ++ +GT+TRRAVE TW+TASNA +RVGSEL+AM+QAP GY +
Sbjct: 780 HPDYDEEGR-YGAILPQVVTAGTITRRAVEPTWLTASNARPDRVGSELKAMVQAPPGYVL 838
Query: 566 IGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMHSITAKAVGISREHA 625
+GADVDSQELWIA+V+GD++ A HG T GWMTL G+KS TD+HS TA VGISREHA
Sbjct: 839 VGADVDSQELWIAAVLGDAHFAGMHGCTAFGWMTLQGRKSRGTDLHSKTAATVGISREHA 898
Query: 626 KIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKGKKLYRLKDGHLEELI 685
KI NY RIYGAG+ FAERLL QFN +++ +A KA++MY +TKG + YRL D E L+
Sbjct: 899 KIFNYGRIYGAGQPFAERLLMQFNHRLTRQEAAEKAQQMYAITKGLRRYRLSD-EGEWLV 957
Query: 686 KRVYSKYE---------------AREVCSAYNTSVDKIFDKPQWYGGTESAMFNRLEEIA 730
+++ E RE ++ + W GGTES MFN+LE IA
Sbjct: 958 TQLHLPVERTEDGWVSLQDLRKIQREASRKSRRKKWEVVAERAWMGGTESEMFNKLESIA 1017
Query: 731 TSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLVCMRWLVSR-- 788
S P TP L CR+SRALEP S +F+ +R+NWVVQS AVD+LHLMLV M+WL
Sbjct: 1018 MSDTPRTPVLGCRISRALEP-SAVQGEFMTSRVNWVVQSSAVDYLHLMLVAMKWLFEEFA 1076
Query: 789 -DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIPLSISFFSGVE 847
D RF ISIHDE+RYLV +E++Y ALAL VTNLLTR KL + D+P S++FFS V+
Sbjct: 1077 IDGRFCISIHDEVRYLVREEDRYRAALALQVTNLLTRCMFAYKLGLNDLPQSVAFFSAVD 1136
Query: 848 IDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKANGVI 894
ID+ LRKE DCKTPSNP G+ + YGIP GE LDIYQ I+ G +
Sbjct: 1137 IDQCLRKEVTMDCKTPSNPTGMERRYGIPQGEALDIYQIIELTKGSL 1183
>gi|432863585|ref|XP_004070139.1| PREDICTED: DNA polymerase subunit gamma-1-like [Oryzias latipes]
Length = 1198
Score = 730 bits (1885), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/946 (43%), Positives = 540/946 (57%), Gaps = 127/946 (13%)
Query: 6 WTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLATFEV 65
W N+SS+N+L++VY LY G L K R IF++G++ D+ NN+ LM YCA D AT +V
Sbjct: 319 WVNISSINNLADVYDLYVGGPPLQKEAREIFIKGNMTDVRNNFQELMQYCALDVEATHQV 378
Query: 66 IQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLAGML 125
F E+ P LF+ER PHPVT AGML
Sbjct: 379 -------FTEQMP-------------------------------LFMERCPHPVTFAGML 400
Query: 126 ELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDKYKDSLWLWDQ 185
E+ +YLPVN NW +Y + ++DL EMK LM D AC LL D +YK+ WLWD
Sbjct: 401 EMGVSYLPVNQNWHRYLEDCQDVYDDLQREMKKSLMTLADDACQLLQDARYKEDPWLWDL 460
Query: 186 DWSVKDLKLKK-------KANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRRELVE 238
+W V++ K KK A KT T P+ +E + + E E + R VE
Sbjct: 461 EWDVQEFKQKKVPTSKKKPAKKTAEAQVSTPLPD--WEDDPGPPSEEETEGLCPSRLAVE 518
Query: 239 KFKPLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIP 298
K K +T +RLP +L G+P WYRKLC K D W P
Sbjct: 519 KLK---ETVNRLPKRRQHLPGHPGWYRKLCEKMSQED-------------------GWSP 556
Query: 299 GPSLISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTDIKVPDAENI----PLEQL 354
G SLIS M++TPKL+ L W PLH+ HGWGYLVP D P EN P +
Sbjct: 557 GASLISLQMRLTPKLMGLMWDGFPLHYTEKHGWGYLVPGRKDNLSPAGENTDPVCPHRSI 616
Query: 355 KQLYNNITKQDNCEANVDNAQNSLRDSVETNISFIDCS--KSAKRLEVIANVLDKKKLAE 412
+++Y ++ CE N SL ++ + D S + + + + N+ D+ +
Sbjct: 617 ERIY-----KEYCEQNRKVQPKSLDSGDSDDLIWTDSSVWEKVEEMSSLENLSDENGIGT 671
Query: 413 ASSTDTSTDDADT---PRE-------------------IGFIKLPHKDGEHLNVGNPLSR 450
S D P E F KLPHKDG H NVG+P S+
Sbjct: 672 VQSDTKRRKSPDPLLFPEESHCHYHHGNGPYNDINIPGCWFFKLPHKDGNHNNVGSPFSK 731
Query: 451 DFINKFSDNSLAGVDIG--AKRIIEISRMLSYWRNNHERVKKQFVVWLNKKDLPRRLV-- 506
DF+ K D +L G A +EI++M+S+WRN H+R+ Q VVWL K +LPR +
Sbjct: 732 DFLVKMEDGTLRAGRGGTNATLALEINKMMSFWRNAHKRISSQMVVWLRKGELPRNVSRH 791
Query: 507 ENIESEGRDYGVILPQLIVSGTLTRRAVEATWMTASNAVGERVGSELRAMIQAPDGYSII 566
++ + EG+ YG ILPQ++ +GT+TRRAVE TW+TASNA +RVGSEL+AM+Q P GY ++
Sbjct: 792 KDFDEEGQ-YGAILPQVVTAGTVTRRAVEPTWLTASNARRDRVGSELKAMVQVPPGYHLV 850
Query: 567 GADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMHSITAKAVGISREHAK 626
GADVDSQELWIA+V+G+++ A HG T GWMTL G+KS TD+HS TA AVGISREHAK
Sbjct: 851 GADVDSQELWIAAVLGEAHFAGMHGCTAFGWMTLQGKKSQGTDLHSRTADAVGISREHAK 910
Query: 627 IINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKGKKLYRLKDGHLEELIK 686
+ NY RIYGAG+ FAERLL QFN +++ +A SKAR+MY LTKG + Y L + E L+
Sbjct: 911 VFNYGRIYGAGQPFAERLLMQFNHRLNQMEAASKARQMYALTKGIRRYHLSE-EGEWLVN 969
Query: 687 RV-----------YSKYEAREVCSAYNTSVDK----IFDKPQWYGGTESAMFNRLEEIAT 731
+ S E R + + S + I K W GGTES MFN+LE IA
Sbjct: 970 ELGIDVQREEDGSVSLQELRRISKVASHSSRRKKWDIVGKRVWAGGTESDMFNKLESIAQ 1029
Query: 732 SLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLVCMRWLVSR--- 788
S QP TP L+CR+SRALEP + + +FI +R+NWVVQS AVD+LHLMLV M+WL
Sbjct: 1030 SAQPATPVLHCRISRALEPKAVRN-EFITSRVNWVVQSSAVDYLHLMLVAMKWLFEEHNI 1088
Query: 789 DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIPLSISFFSGVEI 848
D RF ISIHDE+RYLV E++Y ALAL +TNLLTR+ L + D+P S++FFS V++
Sbjct: 1089 DGRFCISIHDEVRYLVRSEDRYRAALALQITNLLTRSVFAHALGLQDLPQSVAFFSSVDV 1148
Query: 849 DKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKANGVI 894
D+ LRKE DC TPSNP GL + YG+P GE LDIYQ I+ +G +
Sbjct: 1149 DQCLRKEVIMDCVTPSNPTGLERRYGLPPGEALDIYQIINITDGSL 1194
>gi|348506018|ref|XP_003440557.1| PREDICTED: DNA polymerase subunit gamma-1-like [Oreochromis
niloticus]
Length = 1206
Score = 729 bits (1883), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/942 (44%), Positives = 548/942 (58%), Gaps = 119/942 (12%)
Query: 6 WTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLATFEV 65
W N+SS+N+L++V+ LY G L K R FV+GS+ D+ NN+ LM YCA D AT
Sbjct: 327 WVNISSINNLADVHALYVGGPPLQKEARETFVKGSMTDVRNNFQELMQYCALDVKATH-- 384
Query: 66 IQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLAGML 125
EV PLF+ER PHPVTLAGML
Sbjct: 385 ------------------------------------EVFTEQLPLFMERCPHPVTLAGML 408
Query: 126 ELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDKYKDSLWLWDQ 185
E+ +YLP+N NW +Y +S + +L EMK LM D AC LL +D+YK+ WLWD
Sbjct: 409 EMGVSYLPINQNWGRYLEDSQDVYEELQREMKKSLMILADDACQLLENDRYKEDPWLWDL 468
Query: 186 DWSVKDLKLKKKANKTLSV-----DQETEEPEEFYEINKNGEDQTEDEFVKRRRELVEKF 240
+W V++ K KK A +++ P +E + + E E R VE
Sbjct: 469 EWDVQEFKQKKVAASKKKGSKKADNKQIATPLPDWEEDPGPPSEEEMEGPCPSRLAVENL 528
Query: 241 KPLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIPGP 300
K +T +RLP +L +P WYRKLC K +SD S W PG
Sbjct: 529 K---ETVNRLPKRRQHLPAHPGWYRKLCEK------------------MSDNS--WSPGA 565
Query: 301 SLISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTDIKVPDAENIPLEQLKQLYNN 360
SLIS M++TPKL+ LTW PLH+ HGWGYLVP D EN L + +
Sbjct: 566 SLISLQMRLTPKLMGLTWDGFPLHYTEKHGWGYLVPGRRDNLDSQEENTGLVCPHRAIES 625
Query: 361 ITKQDNCEANVDNAQNSLRDSVETNISFIDCSKSAKRLEVIA--------NVLDKKKLAE 412
+ K + CE + + L DS+ ++ + S ++E ++ N L +K AE
Sbjct: 626 VYK-EYCEQHSKERPDYL-DSIPSDDLMLTDSTVWTKVEELSSLESLMEENGLRMRKSAE 683
Query: 413 AS---STDTST----------------DDADTPREIGFIKLPHKDGEHLNVGNPLSRDFI 453
+ STD +D D P F KLPHKDG H NVG+P S+DF+
Sbjct: 684 KNKNRSTDPHYMKEASHCHYHHGNGPYNDVDIP-GCWFFKLPHKDGNHNNVGSPFSKDFL 742
Query: 454 NKFSDNSLAGVDIG--AKRIIEISRMLSYWRNNHERVKKQFVVWLNKKDLPRRLV--ENI 509
K D +L G A R +EI++M+S+WRN H+R+ Q V+WL K +LPR + ++
Sbjct: 743 AKMEDGTLRAGRGGTNATRALEINKMMSFWRNAHKRISSQMVLWLRKGELPRSVSRHKDF 802
Query: 510 ESEGRDYGVILPQLIVSGTLTRRAVEATWMTASNAVGERVGSELRAMIQAPDGYSIIGAD 569
+ EG+ YG ILPQ+I +GT+TRRAVE TW+TASNA +RVGSEL+AM+Q P GY +IGAD
Sbjct: 803 DEEGQ-YGAILPQVITAGTVTRRAVEPTWLTASNARRDRVGSELKAMVQVPPGYHLIGAD 861
Query: 570 VDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMHSITAKAVGISREHAKIIN 629
VDSQELWIA+V+G+++ A HG T GWMTL G+KS TD+HS TA AVGISREHAK+ N
Sbjct: 862 VDSQELWIAAVLGEAHFAGMHGCTAFGWMTLQGKKSQGTDLHSRTADAVGISREHAKVFN 921
Query: 630 YARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKGKKLYRL-KDGH--LEEL-- 684
Y RIYGAG+ FAERLL QFN +S+++A SKAR+MY LTKG + Y L +DG + EL
Sbjct: 922 YGRIYGAGQPFAERLLMQFNHRLSQTEAASKARQMYALTKGIRRYHLSEDGEWLVNELGI 981
Query: 685 -IKR----VYSKYEAREVCSAYNTSVDK----IFDKPQWYGGTESAMFNRLEEIATSLQP 735
++R S E R + + S + I K W GGTES MFN+LE IA S P
Sbjct: 982 DVEREEDGSVSLQELRRITRVASQSSRRKRWDIVGKRLWAGGTESDMFNKLESIAHSKNP 1041
Query: 736 VTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLVCMRWLVSR---DTRF 792
TP L CR+SRALEP + D +FI +R+NWVVQS AVD+LHLMLV M+WL+ D RF
Sbjct: 1042 ATPVLGCRISRALEPKAVKD-EFITSRVNWVVQSSAVDYLHLMLVVMKWLIEEYNIDGRF 1100
Query: 793 VISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIPLSISFFSGVEIDKVL 852
ISIHDE+RYLV E++Y ALAL +TNLLTR+ L M D+P S++FFS V+ID+ L
Sbjct: 1101 CISIHDEVRYLVRSEDRYRAALALQITNLLTRSMFAHALGMQDLPQSVAFFSAVDIDQCL 1160
Query: 853 RKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKANGVI 894
RKE + DC TPSNP G+ + YG+P GE LDIYQ ID G +
Sbjct: 1161 RKEVNMDCVTPSNPTGVERKYGLPPGEALDIYQIIDITKGSL 1202
>gi|354499960|ref|XP_003512071.1| PREDICTED: DNA polymerase subunit gamma-1-like [Cricetulus griseus]
gi|344254210|gb|EGW10314.1| DNA polymerase subunit gamma-1 [Cricetulus griseus]
Length = 1215
Score = 729 bits (1883), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/950 (42%), Positives = 540/950 (56%), Gaps = 132/950 (13%)
Query: 6 WTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLATFEV 65
W N+SS N+L++V+ LY G L+K R +F++GS+ DI N+ +LM YCA+D AT
Sbjct: 329 WMNISSANNLADVHSLYVGGPPLEKEPRELFIKGSMRDIRENFQDLMQYCARDVWAT--- 385
Query: 66 IQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLAGML 125
+EV Q PLFLER PHPVTLAGML
Sbjct: 386 -----------------------------------YEVFQQQLPLFLERCPHPVTLAGML 410
Query: 126 ELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDKYKDSLWLWDQ 185
E+ +YLPVN NW +Y E+ T+ +L EMK LMD + AC LL ++YK+ WLWD
Sbjct: 411 EMGVSYLPVNQNWERYLAEAQGTYEELQREMKKSLMDLANDACQLLSGERYKEDPWLWDL 470
Query: 186 DWSVKDL---------------KLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFV 230
+W +++ KL + + E+P E E++ + + V
Sbjct: 471 EWDLQEFKQKKAKKVKKLASASKLPIEGAGPFGEPTDQEDPGPPSE-----EEELQQDVV 525
Query: 231 KRRRELVEKFKPLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGIS 290
R R + L + D LP + +L G+P WYRKLC + +
Sbjct: 526 ARTR-----LQQLKSSTDLLPKRTQHLPGHPGWYRKLCPR------------------LD 562
Query: 291 DTSEAWIPGPSLISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTD--IKVPDAEN 348
D AW PGPSL+S M++TPKL++LTW PLH+ HGWGYLVP D ++ P +
Sbjct: 563 DP--AWTPGPSLLSLQMRVTPKLMALTWDGFPLHYSDTHGWGYLVPGRRDNLVEPPASPT 620
Query: 349 I-------PLEQLKQLYN-NITKQDNCEANVDNAQNSLRDSVETNISFIDCSKSAKRLEV 400
+ P ++ LY + +Q + + + V N S ++ L+V
Sbjct: 621 VESTGLACPYRAIEALYRKHCLEQGKQQLKTQETEVAEEFLVTDNSSMWQTAEELGCLDV 680
Query: 401 IA-----NVLDKKKLAEASSTDTST------------DDADTPREIGFIKLPHKDGEHLN 443
A N L + LA ++ T +D D P F KLPHKDG + N
Sbjct: 681 EAEAKMENSLLGQPLALPAACVPQTSQPTYHHGNGPYNDVDIP-GCWFFKLPHKDGNNYN 739
Query: 444 VGNPLSRDFINKFSDNSLAGVDIGAKRIIEISRMLSYWRNNHERVKKQFVVWLNKKDLPR 503
VG+P ++DF+ K D +L G R +EI++M+S+WRN H+R+ Q VVWL + LPR
Sbjct: 740 VGSPFAKDFLPKMEDGTLQAGPGGGPRALEINKMISFWRNAHKRISSQMVVWLPRSALPR 799
Query: 504 RLVEN--IESEGRDYGVILPQLIVSGTLTRRAVEATWMTASNAVGERVGSELRAMIQAPD 561
+ + + EGR YG ILPQ++ +GT+TRRAVE TW+TASNA +RVGSEL+AM+QAP
Sbjct: 800 AVTRHPTFDEEGR-YGAILPQVVTAGTITRRAVEPTWLTASNARPDRVGSELKAMVQAPP 858
Query: 562 GYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMHSITAKAVGIS 621
GY ++GADVDSQELWIA+V+GD++ A HG T GWMTL G+KS TD+HS TA VGIS
Sbjct: 859 GYVLVGADVDSQELWIAAVLGDAHFAGMHGCTAFGWMTLQGRKSRGTDLHSKTASTVGIS 918
Query: 622 REHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKGKKLYRLKD--- 678
REHAK+ NY RIYGAG+ FAERLL QFN +++ +A KA++MY +TKG + YRL D
Sbjct: 919 REHAKVFNYGRIYGAGQSFAERLLMQFNHRLTRQEAAEKAQQMYAVTKGLRRYRLSDEGE 978
Query: 679 ---GHLEELIKRVYSKYEA--------REVCSAYNTSVDKIFDKPQWYGGTESAMFNRLE 727
L+ + R + + RE ++F + W GGTES MFN+LE
Sbjct: 979 WLVRQLDLPVDRTEDGWVSLQDLRKIQREASRKSRWKKWEVFTERAWTGGTESEMFNKLE 1038
Query: 728 EIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLVCMRWLVS 787
IA S P TP L C +SRALEP +FI +R+NWVVQS AVD+LHLMLV MRWL
Sbjct: 1039 SIAMSDTPRTPVLGCCISRALEPTVV-QGEFITSRVNWVVQSSAVDYLHLMLVAMRWLFE 1097
Query: 788 R---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIPLSISFFS 844
D RF ISIHDE+RYLV +E++Y ALAL +TNLLTR KL + D+P S++FFS
Sbjct: 1098 EFAIDGRFCISIHDEVRYLVLEEDRYRAALALQITNLLTRCMFAYKLGLNDLPQSVAFFS 1157
Query: 845 GVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKANGVI 894
V+ID+ LRKE DCKTPSNP G+ + YGIP GE LDIYQ I+ G +
Sbjct: 1158 AVDIDQCLRKEVTMDCKTPSNPTGMERRYGIPQGEALDIYQIIELTKGSL 1207
>gi|194039637|ref|XP_001927099.1| PREDICTED: DNA polymerase subunit gamma-1 [Sus scrofa]
Length = 1224
Score = 728 bits (1879), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/955 (43%), Positives = 545/955 (57%), Gaps = 136/955 (14%)
Query: 6 WTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLATFEV 65
W ++SS+N+L++V+ LY G L+K R +FV+G+++DI N+ +LM YCA+D AT
Sbjct: 332 WLDISSVNNLADVHHLYVGGPPLEKEPRELFVKGNMKDIRENFQDLMRYCAQDVWAT--- 388
Query: 66 IQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLAGML 125
FEV Q PLFLER PHPVTLAGML
Sbjct: 389 -----------------------------------FEVFQQQLPLFLERCPHPVTLAGML 413
Query: 126 ELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDKYKDSLWLWDQ 185
E+ +YLPVN NW +Y E+ T+ +L EMK LMD + AC LL ++YK+ WLWD
Sbjct: 414 EMGVSYLPVNQNWERYLAEAQSTYEELQREMKKSLMDLANDACQLLSGERYKEDPWLWDL 473
Query: 186 DWSVKDLKLK--------KKANKTLSVDQETEEPEEFYEINKNGEDQTEDEF---VKRRR 234
+W +++ K K + A + + P + E G E+EF V R
Sbjct: 474 EWDLQEFKQKKAKKLKRKEPATASKLPIEGAGAPGDPKEQEDPGPPSEEEEFQQDVMART 533
Query: 235 ELVEKFKPLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSE 294
L + L T + LP +L G+P WYRKLC + + D
Sbjct: 534 RLEQ----LRGTTELLPKRPQHLPGHPGWYRKLCPR------------------LDDP-- 569
Query: 295 AWIPGPSLISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTD--IKVPD------A 346
AW PGPSL+S M+ITPKL++LTW PLH+ HGWGYLVP D KVP A
Sbjct: 570 AWTPGPSLLSLQMRITPKLMALTWDGFPLHYSEQHGWGYLVPGRRDNLAKVPGMAPASTA 629
Query: 347 ENIPLEQLKQLYN-NITKQDNCEANVDNAQNS----LRDS--VETNISFIDCSKSAKRLE 399
P ++ LY + +Q + + A + L DS V + + C LE
Sbjct: 630 VPCPYTAIESLYRKHCLEQGRQQPELQEAGLAEEFLLTDSGTVWQTVEELGC------LE 683
Query: 400 VIANV-LDKKKLAEASS----TDTSTDDADTPRE--------------IGFIKLPHKDGE 440
V A L+K + A+ T T + A P F KLPHKDG
Sbjct: 684 VEAEATLEKLRAADPGQPPALTATGSPQASRPAHHHGNGPYNEVDVPGCWFFKLPHKDGN 743
Query: 441 HLNVGNPLSRDFINKFSDNSLAGVDIGAK--RIIEISRMLSYWRNNHERVKKQFVVWLNK 498
NVG+P ++DF+ K D +L GA R +EI++M+S+WRN H+R+ Q VVWL +
Sbjct: 744 SYNVGSPFAKDFLPKMEDGTLQAGPGGASGPRALEINKMISFWRNAHKRISSQMVVWLPR 803
Query: 499 KDLPRRLVEN--IESEGRDYGVILPQLIVSGTLTRRAVEATWMTASNAVGERVGSELRAM 556
LPR + + + EGR YG ILPQ++ +GT+TRRAVE TW+TASNA +RVGSEL+AM
Sbjct: 804 SALPRAVTRHPAFDEEGR-YGAILPQVVTAGTITRRAVEPTWLTASNARPDRVGSELKAM 862
Query: 557 IQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMHSITAK 616
+QAP GY ++GADVDSQELWIA+V+GD++ A HG T GWMTL G+KS TD+HS TA
Sbjct: 863 VQAPPGYVLVGADVDSQELWIAAVLGDAHFAGMHGCTAFGWMTLQGRKSRGTDLHSKTAA 922
Query: 617 AVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKGKKLYRL 676
VGISREHAKI NY RIYGAG+ FAERLL QFN +++ +A KA++MY +TKG + YRL
Sbjct: 923 TVGISREHAKIFNYGRIYGAGQPFAERLLMQFNHRLTRQEAAEKAQQMYAVTKGLRRYRL 982
Query: 677 KD------GHLEELIKRVYSKYEA--------REVCSAYNTSVDKIFDKPQWYGGTESAM 722
D L+ + R + + RE ++ + W GGTES M
Sbjct: 983 SDEGEWLVRELDLPVDRTEDGWISLQDLRKIQREASRKSRRKKWEVVAERAWTGGTESEM 1042
Query: 723 FNRLEEIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLVCM 782
FN+LE IATS P TP L CR+SRALEP S +F+ +R+NWVVQS AVD+LHLMLV M
Sbjct: 1043 FNKLESIATSDTPRTPVLGCRISRALEP-STVQGEFMTSRVNWVVQSSAVDYLHLMLVAM 1101
Query: 783 RWLVSR---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIPLS 839
+WL D RF ISIHDE+RYLV +E++Y ALAL VTNLLTR KL + D+P S
Sbjct: 1102 KWLFEEFAIDGRFCISIHDEVRYLVREEDRYRAALALQVTNLLTRCMFAYKLGLNDLPQS 1161
Query: 840 ISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKANGVI 894
++FFS V+ID+ LRKE DCKTPSNP G+ K YGIP GE LDIYQ I+ G +
Sbjct: 1162 VAFFSAVDIDQCLRKEVTMDCKTPSNPTGMEKRYGIPQGEALDIYQIIELTKGSL 1216
>gi|326680088|ref|XP_001921130.2| PREDICTED: DNA polymerase subunit gamma-1-like [Danio rerio]
Length = 1203
Score = 728 bits (1878), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/944 (43%), Positives = 539/944 (57%), Gaps = 122/944 (12%)
Query: 6 WTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLATFEV 65
W N+SS+N+L++V+ LY G L K R +FV+GS+ DI N+ LM YCA D LA
Sbjct: 316 WVNISSINNLADVHALYVGGDPLMKESRELFVKGSMSDIRGNFQELMQYCALDVLA---- 371
Query: 66 IQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLAGML 125
T EV PLF+ER PHPVTLAGML
Sbjct: 372 ----------------------------------TQEVFTQQLPLFMERCPHPVTLAGML 397
Query: 126 ELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDKYKDSLWLWDQ 185
E+ YLPVN+NW +Y ++ T+ +L EMK LM D AC LL DD+YKD WLWD
Sbjct: 398 EMGVCYLPVNHNWRRYLEDAQATYEELQREMKKSLMILADDACQLLQDDRYKDDPWLWDL 457
Query: 186 DWSVKDLKLKKKANKTLSVDQETEEPEEF--YEINKNGED-----QTEDEFVKRRRELVE 238
DW V++ K KK QE E E E ED + E+ RREL++
Sbjct: 458 DWDVQEFKQKKVPVSKKKAKQEAEATEAANDSEAIDWPEDPGPPLEEEEGDSDPRRELLQ 517
Query: 239 KFKPLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIP 298
+ K +T LP +L +P WYRKLCVK A E W P
Sbjct: 518 RLK---ETVSCLPKRRQHLPAHPSWYRKLCVKMSEA-------------------EDWSP 555
Query: 299 GPSLISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPY---STDIKVPDAENI-PLEQL 354
G SLIS M+ITPKL+ LTW PLH+ HGWGYLVP + DI + E + P +
Sbjct: 556 GASLISLQMRITPKLMGLTWDGFPLHYTDQHGWGYLVPGRRDNLDISEDNEEPVCPYRAI 615
Query: 355 KQLYNNITKQDNCEANVDNAQNSLRDSVETNISFIDCSKSAKRLEV-----IANVLDKKK 409
+ +Y +Q E + + T+ + + RLE+ ++ K+
Sbjct: 616 ESVYKEYCEQKGKEQPKYPDSPVSDELMLTDTAVWQTVEEVSRLEMFDDEALSTAAPSKR 675
Query: 410 LAEASSTDTSTDDADTPREIG-------------FIKLPHKDGEHLNVGNPLSRDFINKF 456
+ + ++ + + + P G F KLPHKDG NVG+P S+DF++K
Sbjct: 676 ITKKVNSVFKSLNGECPYHHGNGPYNDVNIPGCWFFKLPHKDGNENNVGSPFSKDFLSKM 735
Query: 457 SDNSLAGVDIG--AKRIIEISRMLSYWRNNHERVKKQFVVWLNKKDLPR--RLVENIESE 512
+L G A R +EI++M+S+WRN +R+ Q VVWL + +LPR RL ++ + E
Sbjct: 736 ESGTLQAGREGTNATRALEINKMISFWRNAQKRISSQMVVWLRRAELPRSVRLHQDYDEE 795
Query: 513 GRDYGVILPQLIVSGTLTRRAVEATWMTASNAVGERVGSELRAMIQAPDGYSIIGADVDS 572
G+ YG ILPQ+I +GT+TRRAVE TW+TASNA +RVGSEL+AM+Q P Y ++GADVDS
Sbjct: 796 GQ-YGAILPQVIPAGTVTRRAVEPTWLTASNARKDRVGSELKAMVQVPPAYHLVGADVDS 854
Query: 573 QELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMHSITAKAVGISREHAKIINYAR 632
QELWIA+++G+++ A HG T GWMTL G+KS TD+HS TA AVGISREHAK+ NY R
Sbjct: 855 QELWIAAMLGEAHFAGMHGCTAFGWMTLQGKKSQGTDLHSRTADAVGISREHAKVFNYGR 914
Query: 633 IYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKGKKLY------------------ 674
IYGAG+ FAERLL QFN +S+ +A KAR+MY LTKG + Y
Sbjct: 915 IYGAGQPFAERLLMQFNHRLSQQEAAGKARQMYALTKGLRRYHLSEEGEWLLQKLNVNVE 974
Query: 675 RLKDGHLE-ELIKRVYSKYEAREVCSAYNTSVDKIFDKPQWYGGTESAMFNRLEEIATSL 733
R +DG + + ++++ R +N + ++ W GTES MFN+LE IA S
Sbjct: 975 RAEDGSISLQDLRKISKVATQRGSKKKWNLTAGRV-----WTDGTESYMFNKLESIAQSD 1029
Query: 734 QPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLVCMRWLVSR---DT 790
+P TP LNCR+SRALEP S +FI +R+NWVVQS AVD+LHLMLV MRWL D
Sbjct: 1030 RPATPVLNCRISRALEP-SAVQEEFITSRVNWVVQSSAVDYLHLMLVSMRWLFEEHDIDG 1088
Query: 791 RFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIPLSISFFSGVEIDK 850
RF ISIHDE+RYLV E++Y ALAL +TNLLTR KL M D+P S++FFS V+IDK
Sbjct: 1089 RFCISIHDEVRYLVTSEDRYRAALALQITNLLTRCMFAFKLGMMDLPQSVAFFSAVDIDK 1148
Query: 851 VLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKANGVI 894
LRKE DCKTPS+P G+ + YG+P GE LDIYQ I+ G +
Sbjct: 1149 CLRKEVTMDCKTPSSPAGVERRYGLPQGEALDIYQIIEITKGSL 1192
>gi|355692979|gb|EHH27582.1| hypothetical protein EGK_17816 [Macaca mulatta]
Length = 1229
Score = 727 bits (1876), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/951 (42%), Positives = 543/951 (57%), Gaps = 128/951 (13%)
Query: 6 WTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLATFEV 65
W ++SS+NSL+EV++LY G L+K R +FV+G+++DI N+ +LM YCA+D AT
Sbjct: 337 WLDISSVNSLAEVHRLYVGGPPLEKEPRELFVKGTMKDIRENFQDLMQYCAQDVWATH-- 394
Query: 66 IQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLAGML 125
EV Q PLFLER PHPVTLAGML
Sbjct: 395 ------------------------------------EVFQQQLPLFLERCPHPVTLAGML 418
Query: 126 ELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDKYKDSLWLWDQ 185
E+ +YLPVN NW +Y E+ T+ +L EMK LMD + AC LL ++YK+ WLWD
Sbjct: 419 EMGVSYLPVNQNWERYLAEAQGTYEELQREMKKSLMDLANDACQLLSGERYKEDPWLWDL 478
Query: 186 DWSVKDLKL--------KKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVK--RRRE 235
+W +++ K + L +D P + + G E+EF + R
Sbjct: 479 EWDLQEFKQKKAKKVKKEPATASKLPIDG-AGAPGDPMDQEDLGPRSEEEEFQQDVMARA 537
Query: 236 LVEKFKPLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEA 295
++K K T + LP +L G+P WYRKLC + + D A
Sbjct: 538 CLQKLK---GTTELLPKRPQHLPGHPGWYRKLCPR------------------LDDP--A 574
Query: 296 WIPGPSLISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTD--IKVPDAENI---- 349
W PGPSL+S M++TPKL++LTW PLH+ HGWGYLVP D K+P +
Sbjct: 575 WTPGPSLLSLQMRVTPKLMALTWDGFPLHYSERHGWGYLVPGRRDNLAKLPTGTTLESAG 634
Query: 350 ---PLEQLKQLY---------NNITKQDNCEAN----VDNAQ--------NSLRDSVETN 385
P ++ LY +T Q+ A DN+ + L E
Sbjct: 635 VVCPYRAIESLYRKHCLEQGKQQLTPQEAGLAEEFLLTDNSAIWQTVEELDYLEVEAEAK 694
Query: 386 ISFIDCSKSAKRLEVIANVLDKKKLAEASSTDTSTDDADTPREIGFIKLPHKDGEHLNVG 445
+ + + + L + A K + +D D P F KLPHKDG NVG
Sbjct: 695 MENLRAAVPGQPLALTAPGGPKDSQPNYHHGNGPYNDVDIP-GCWFFKLPHKDGNSCNVG 753
Query: 446 NPLSRDFINKFSDNSLAGVDIGAK--RIIEISRMLSYWRNNHERVKKQFVVWLNKKDLPR 503
+P ++DF+ K D +L GA R +EI++M+S+WRN H+R+ Q VVWL + LPR
Sbjct: 754 SPFAKDFLPKMEDGTLQAGPGGASGPRALEINKMISFWRNAHKRISSQMVVWLPRSALPR 813
Query: 504 RLVE--NIESEGRDYGVILPQLIVSGTLTRRAVEATWMTASNAVGERVGSELRAMIQAPD 561
++ + + EG YG ILPQ++ +GT+TRRAVE TW+TASNA +RVGSEL+AM+QAP
Sbjct: 814 AVIRHPDYDEEGL-YGAILPQVVTAGTITRRAVEPTWLTASNARPDRVGSELKAMVQAPP 872
Query: 562 GYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMHSITAKAVGIS 621
GY+++GADVDSQELWIA+V+GD++ A HG T GWMTL G+KS TD+HS TA VGIS
Sbjct: 873 GYTLVGADVDSQELWIAAVLGDAHFAGMHGCTAFGWMTLQGRKSRGTDLHSKTATTVGIS 932
Query: 622 REHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKGKKLYRLKDGHL 681
REHAK+ NY RIYGAG+ FAERLL QFN +++ +A KA++MY +TKG + YRL D
Sbjct: 933 REHAKVFNYGRIYGAGQPFAERLLMQFNHRLTQQEAAEKAQQMYAITKGLRWYRLSD-EG 991
Query: 682 EELIKRVYSKYE---------------AREVCSAYNTSVDKIFDKPQWYGGTESAMFNRL 726
E L++ ++ + RE + ++ + W GGTES MFN+L
Sbjct: 992 EWLVRELHLPVDRTEGGWISLQDLRKVQREAARKSHRKKWEVIAERAWKGGTESEMFNKL 1051
Query: 727 EEIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLVCMRWLV 786
E IATS P TP L CR+SRALEP S +F+ +R+NWVVQS AVD+LHLMLV M+WL
Sbjct: 1052 ESIATSDIPRTPVLGCRISRALEP-SAVQGEFMTSRVNWVVQSSAVDYLHLMLVAMKWLF 1110
Query: 787 SR---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIPLSISFF 843
D RF ISIHDE+RYLV +E++Y ALAL +TNLLTR KL + D+P S++FF
Sbjct: 1111 EEFAIDGRFCISIHDEVRYLVREEDRYRAALALQITNLLTRCMFAYKLGLNDLPQSVAFF 1170
Query: 844 SGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKANGVI 894
S V+ID+ LRKE DCKTPSNP G+ + YGIP GE LDIYQ I+ G +
Sbjct: 1171 SAVDIDRCLRKEVTMDCKTPSNPTGMERRYGIPQGEALDIYQIIELTKGSL 1221
>gi|109082314|ref|XP_001092360.1| PREDICTED: DNA polymerase subunit gamma-1 [Macaca mulatta]
Length = 1228
Score = 727 bits (1876), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/951 (42%), Positives = 543/951 (57%), Gaps = 128/951 (13%)
Query: 6 WTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLATFEV 65
W ++SS+NSL+EV++LY G L+K R +FV+G+++DI N+ +LM YCA+D AT
Sbjct: 336 WLDISSVNSLAEVHRLYVGGPPLEKEPRELFVKGTMKDIRENFQDLMQYCAQDVWATH-- 393
Query: 66 IQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLAGML 125
EV Q PLFLER PHPVTLAGML
Sbjct: 394 ------------------------------------EVFQQQLPLFLERCPHPVTLAGML 417
Query: 126 ELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDKYKDSLWLWDQ 185
E+ +YLPVN NW +Y E+ T+ +L EMK LMD + AC LL ++YK+ WLWD
Sbjct: 418 EMGVSYLPVNQNWERYLAEAQGTYEELQREMKKSLMDLANDACQLLSGERYKEDPWLWDL 477
Query: 186 DWSVKDLKL--------KKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVK--RRRE 235
+W +++ K + L +D P + + G E+EF + R
Sbjct: 478 EWDLQEFKQKKAKKVKKEPATASKLPIDG-AGAPGDPMDQEDLGPRSEEEEFQQDVMARA 536
Query: 236 LVEKFKPLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEA 295
++K K T + LP +L G+P WYRKLC + + D A
Sbjct: 537 CLQKLK---GTTELLPKRPQHLPGHPGWYRKLCPR------------------LDDP--A 573
Query: 296 WIPGPSLISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTD--IKVPDAENI---- 349
W PGPSL+S M++TPKL++LTW PLH+ HGWGYLVP D K+P +
Sbjct: 574 WTPGPSLLSLQMRVTPKLMALTWDGFPLHYSERHGWGYLVPGRRDNLAKLPTGTTLESAG 633
Query: 350 ---PLEQLKQLY---------NNITKQDNCEAN----VDNAQ--------NSLRDSVETN 385
P ++ LY +T Q+ A DN+ + L E
Sbjct: 634 VVCPYRAIESLYRKHCLEQGKQQLTPQEAGLAEEFLLTDNSAIWQTVEELDYLEVEAEAK 693
Query: 386 ISFIDCSKSAKRLEVIANVLDKKKLAEASSTDTSTDDADTPREIGFIKLPHKDGEHLNVG 445
+ + + + L + A K + +D D P F KLPHKDG NVG
Sbjct: 694 MENLRAAVPGQPLALTAPGGPKDSQPNYHHGNGPYNDVDIP-GCWFFKLPHKDGNSCNVG 752
Query: 446 NPLSRDFINKFSDNSLAGVDIGAK--RIIEISRMLSYWRNNHERVKKQFVVWLNKKDLPR 503
+P ++DF+ K D +L GA R +EI++M+S+WRN H+R+ Q VVWL + LPR
Sbjct: 753 SPFAKDFLPKMEDGTLQAGPGGASGPRALEINKMISFWRNAHKRISSQMVVWLPRSALPR 812
Query: 504 RLVE--NIESEGRDYGVILPQLIVSGTLTRRAVEATWMTASNAVGERVGSELRAMIQAPD 561
++ + + EG YG ILPQ++ +GT+TRRAVE TW+TASNA +RVGSEL+AM+QAP
Sbjct: 813 AVIRHPDYDEEGL-YGAILPQVVTAGTITRRAVEPTWLTASNARPDRVGSELKAMVQAPP 871
Query: 562 GYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMHSITAKAVGIS 621
GY+++GADVDSQELWIA+V+GD++ A HG T GWMTL G+KS TD+HS TA VGIS
Sbjct: 872 GYTLVGADVDSQELWIAAVLGDAHFAGMHGCTAFGWMTLQGRKSRGTDLHSKTATTVGIS 931
Query: 622 REHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKGKKLYRLKDGHL 681
REHAK+ NY RIYGAG+ FAERLL QFN +++ +A KA++MY +TKG + YRL D
Sbjct: 932 REHAKVFNYGRIYGAGQPFAERLLMQFNHRLTQQEAAEKAQQMYAITKGLRWYRLSD-EG 990
Query: 682 EELIKRVYSKYE---------------AREVCSAYNTSVDKIFDKPQWYGGTESAMFNRL 726
E L++ ++ + RE + ++ + W GGTES MFN+L
Sbjct: 991 EWLVRELHLPVDRTEGGWISLQDLRKVQREAARKSHRKKWEVIAERAWKGGTESEMFNKL 1050
Query: 727 EEIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLVCMRWLV 786
E IATS P TP L CR+SRALEP S +F+ +R+NWVVQS AVD+LHLMLV M+WL
Sbjct: 1051 ESIATSDIPRTPVLGCRISRALEP-SAVQGEFMTSRVNWVVQSSAVDYLHLMLVAMKWLF 1109
Query: 787 SR---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIPLSISFF 843
D RF ISIHDE+RYLV +E++Y ALAL +TNLLTR KL + D+P S++FF
Sbjct: 1110 EEFAIDGRFCISIHDEVRYLVREEDRYRAALALQITNLLTRCMFAYKLGLNDLPQSVAFF 1169
Query: 844 SGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKANGVI 894
S V+ID+ LRKE DCKTPSNP G+ + YGIP GE LDIYQ I+ G +
Sbjct: 1170 SAVDIDRCLRKEVTMDCKTPSNPTGMERRYGIPQGEALDIYQIIELTKGSL 1220
>gi|297463314|ref|XP_002702642.1| PREDICTED: LOW QUALITY PROTEIN: DNA polymerase subunit gamma-1 [Bos
taurus]
gi|297487953|ref|XP_002696610.1| PREDICTED: LOW QUALITY PROTEIN: DNA polymerase subunit gamma-1 [Bos
taurus]
gi|296475559|tpg|DAA17674.1| TPA: polymerase (DNA directed), gamma [Bos taurus]
Length = 1223
Score = 727 bits (1876), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/955 (42%), Positives = 547/955 (57%), Gaps = 135/955 (14%)
Query: 6 WTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLATFEV 65
W ++SS+N+L++V+ LY G L+K R +FV+G+++DI N+ +LM YCA+D AT
Sbjct: 330 WLDISSVNNLADVHGLYVGGPRLEKEPRELFVKGNMKDIRENFQDLMQYCAQDAWAT--- 386
Query: 66 IQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLAGML 125
+EV Q PLFLER PHPVTLAGML
Sbjct: 387 -----------------------------------YEVFQQQLPLFLERCPHPVTLAGML 411
Query: 126 ELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDKYKDSLWLWDQ 185
E+ +YLPVN NW +Y E+ T+ +L EMK LMD + AC LL ++YK+ WLWD
Sbjct: 412 EMGVSYLPVNQNWERYLAEAQGTYEELQREMKKSLMDLANDACQLLSGERYKEDPWLWDL 471
Query: 186 DWSVKDL---------KLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVK--RRR 234
+W V++ + + A L V+ + P + + G E+EF + R
Sbjct: 472 EWDVQEFKQKKAKKGKRREPAAASKLPVEG-ADAPGDPRDQEDPGPPSEEEEFQRDATAR 530
Query: 235 ELVEKFKPLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSE 294
+E+ + T + LP +L G+P WYRKLC P D +
Sbjct: 531 TCLEQLR---GTTELLPKRPQHLPGHPGWYRKLC--PRLDDPE----------------- 568
Query: 295 AWIPGPSLISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTD-IKVPDAENIP--- 350
W PGPSL+S M++TPKL++LTW PLH+ HGWGYLVP D + A + P
Sbjct: 569 -WTPGPSLLSLQMRVTPKLMALTWDGFPLHYSEQHGWGYLVPGRRDNLAQVSAGSTPTSA 627
Query: 351 -----------------LEQLKQLYNNITKQDNCEANVDNAQNSLRDSVETNISFIDCSK 393
LEQ KQ + + D E + + ++ +VE + ++
Sbjct: 628 GAACPHTAIESLYRKHCLEQGKQQLE-LPQADLSEEFLLSDSGAMWQTVE-ELGCLEVEA 685
Query: 394 SAKRLEVIANVLDKKKLAEASSTDTST------------DDADTPREIGFIKLPHKDGEH 441
AK +E + + + LA ++ +D D P F KLPHKDG
Sbjct: 686 EAK-MENLQEAVPGQPLAPTAAGGPKASQPAYHHGNGPYNDVDIP-GCWFFKLPHKDGNS 743
Query: 442 LNVGNPLSRDFINKFSDNSLAGVDIGAK--RIIEISRMLSYWRNNHERVKKQFVVWLNKK 499
NVG+P ++DF+ K D SL GA R +EI++M+S+WRN H+R+ Q VVWL +
Sbjct: 744 CNVGSPFAKDFLPKMEDGSLQAGPGGASGPRALEINKMISFWRNAHKRISSQMVVWLPRS 803
Query: 500 DLPRRLVE--NIESEGRDYGVILPQLIVSGTLTRRAVEATWMTASNAVGERVGSELRAMI 557
LPR + N + EGR YG ILPQ++ +GT+TRRAVE TW+TASNA +RVGSEL+AM+
Sbjct: 804 ALPRAVTRHANYDEEGR-YGAILPQVVTAGTITRRAVEPTWLTASNARPDRVGSELKAMV 862
Query: 558 QAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMHSITAKA 617
QAP GY ++GADVDSQELWIA+V+GD++ A HG T GWMTL G+KS TD+HS TA
Sbjct: 863 QAPPGYVLVGADVDSQELWIAAVLGDAHFAGMHGCTAFGWMTLQGRKSRGTDLHSKTAAT 922
Query: 618 VGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKGKKLYRLK 677
VGISREHAKIINY RIYGAG+ FAERLL QFN +++ +A KA++MY +TKG + YRL
Sbjct: 923 VGISREHAKIINYGRIYGAGQPFAERLLMQFNHRLTRQEAAEKAQQMYAVTKGLRRYRLS 982
Query: 678 DGHLEELIKRVYSKYE---------------AREVCSAYNTSVDKIFDKPQWYGGTESAM 722
D E L+K + E RE ++ + W GGTES M
Sbjct: 983 D-EGEWLVKELDLPVERTEDGWVSLKDLRKIQREASKKSRWKKWEVVAQRAWMGGTESEM 1041
Query: 723 FNRLEEIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLVCM 782
FN+LE IATS P TP L CR+SRALEP + +F+ +R+NWVVQS AVD+LHLMLV M
Sbjct: 1042 FNKLESIATSDIPRTPVLGCRISRALEPCAV-RGEFMTSRVNWVVQSSAVDYLHLMLVAM 1100
Query: 783 RWLVSR---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIPLS 839
+WL D RF ISIHDE+RYLV +E++Y ALAL +TNLLTR KL + D+P S
Sbjct: 1101 KWLFEEFAIDGRFCISIHDEVRYLVREEDRYRAALALQITNLLTRCMFAHKLGLNDLPQS 1160
Query: 840 ISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKANGVI 894
++FFS ++ID+ LRKE DCKTPSNP G+ + YGIP GE LDIYQ I+ G +
Sbjct: 1161 VAFFSTIDIDQCLRKEVTMDCKTPSNPTGMERRYGIPQGEALDIYQIIELTKGSL 1215
>gi|355778287|gb|EHH63323.1| hypothetical protein EGM_16268 [Macaca fascicularis]
Length = 1228
Score = 727 bits (1876), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/951 (42%), Positives = 543/951 (57%), Gaps = 128/951 (13%)
Query: 6 WTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLATFEV 65
W ++SS+NSL+EV++LY G L+K R +FV+G+++DI N+ +LM YCA+D AT
Sbjct: 336 WLDISSVNSLAEVHRLYVGGPPLEKEPRELFVKGTMKDIRENFQDLMQYCAQDVWATH-- 393
Query: 66 IQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLAGML 125
EV Q PLFLER PHPVTLAGML
Sbjct: 394 ------------------------------------EVFQQQLPLFLERCPHPVTLAGML 417
Query: 126 ELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDKYKDSLWLWDQ 185
E+ +YLPVN NW +Y E+ T+ +L EMK LMD + AC LL ++YK+ WLWD
Sbjct: 418 EMGVSYLPVNQNWERYLAEAQGTYEELQREMKKSLMDLANDACQLLSGERYKEDPWLWDL 477
Query: 186 DWSVKDLKL--------KKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVK--RRRE 235
+W +++ K + L +D P + + G E+EF + R
Sbjct: 478 EWDLQEFKQKKAKKVKKEPATASKLPIDG-AGAPGDPMDQEDLGPRSEEEEFQQDVMARA 536
Query: 236 LVEKFKPLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEA 295
++K K T + LP +L G+P WYRKLC + + D A
Sbjct: 537 CLQKLK---GTTELLPKRPQHLPGHPGWYRKLCPR------------------LDDP--A 573
Query: 296 WIPGPSLISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTD--IKVPDAENI---- 349
W PGPSL+S M++TPKL++LTW PLH+ HGWGYLVP D K+P +
Sbjct: 574 WTPGPSLLSLQMRVTPKLMALTWDGFPLHYSERHGWGYLVPGRRDNLAKLPTGTTLESAG 633
Query: 350 ---PLEQLKQLY---------NNITKQDNCEAN----VDNAQ--------NSLRDSVETN 385
P ++ LY +T Q+ A DN+ + L E
Sbjct: 634 VVCPYRAIESLYRKHCLEQGKQQLTPQEAGLAEEFLLTDNSAIWQTVEELDYLEVEAEAK 693
Query: 386 ISFIDCSKSAKRLEVIANVLDKKKLAEASSTDTSTDDADTPREIGFIKLPHKDGEHLNVG 445
+ + + + L + A K + +D D P F KLPHKDG NVG
Sbjct: 694 MENLRAAVPGQPLALTAPGGPKDSQPNYHHGNGPYNDVDIP-GCWFFKLPHKDGNSCNVG 752
Query: 446 NPLSRDFINKFSDNSLAGVDIGAK--RIIEISRMLSYWRNNHERVKKQFVVWLNKKDLPR 503
+P ++DF+ K D +L GA R +EI++M+S+WRN H+R+ Q VVWL + LPR
Sbjct: 753 SPFAKDFLPKMEDGTLQAGPGGASGPRALEINKMISFWRNAHKRISSQMVVWLPRSALPR 812
Query: 504 RLVE--NIESEGRDYGVILPQLIVSGTLTRRAVEATWMTASNAVGERVGSELRAMIQAPD 561
++ + + EG YG ILPQ++ +GT+TRRAVE TW+TASNA +RVGSEL+AM+QAP
Sbjct: 813 AVIRHPDYDEEGL-YGAILPQVVTAGTITRRAVEPTWLTASNARPDRVGSELKAMVQAPP 871
Query: 562 GYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMHSITAKAVGIS 621
GY+++GADVDSQELWIA+V+GD++ A HG T GWMTL G+KS TD+HS TA VGIS
Sbjct: 872 GYTLVGADVDSQELWIAAVLGDAHFAGMHGCTAFGWMTLQGRKSRGTDLHSKTATTVGIS 931
Query: 622 REHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKGKKLYRLKDGHL 681
REHAK+ NY RIYGAG+ FAERLL QFN +++ +A KA++MY +TKG + YRL D
Sbjct: 932 REHAKVFNYGRIYGAGQPFAERLLMQFNHRLTQQEAAEKAQQMYAVTKGLRWYRLSD-EG 990
Query: 682 EELIKRVYSKYE---------------AREVCSAYNTSVDKIFDKPQWYGGTESAMFNRL 726
E L++ ++ + RE + ++ + W GGTES MFN+L
Sbjct: 991 EWLVRELHLPVDRTEGGWISLQDLRKVQREAARKSHRKKWEVIAERAWKGGTESEMFNKL 1050
Query: 727 EEIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLVCMRWLV 786
E IATS P TP L CR+SRALEP S +F+ +R+NWVVQS AVD+LHLMLV M+WL
Sbjct: 1051 ESIATSDIPRTPVLGCRISRALEP-SAVQGEFMTSRVNWVVQSSAVDYLHLMLVAMKWLF 1109
Query: 787 SR---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIPLSISFF 843
D RF ISIHDE+RYLV +E++Y ALAL +TNLLTR KL + D+P S++FF
Sbjct: 1110 EEFAIDGRFCISIHDEVRYLVREEDRYRAALALQITNLLTRCMFAYKLGLNDLPQSVAFF 1169
Query: 844 SGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKANGVI 894
S V+ID+ LRKE DCKTPSNP G+ + YGIP GE LDIYQ I+ G +
Sbjct: 1170 SAVDIDRCLRKEVTMDCKTPSNPTGMERRYGIPQGEALDIYQIIELTKGSL 1220
>gi|402875226|ref|XP_003901414.1| PREDICTED: LOW QUALITY PROTEIN: DNA polymerase subunit gamma-1 [Papio
anubis]
Length = 1229
Score = 726 bits (1875), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/951 (42%), Positives = 545/951 (57%), Gaps = 128/951 (13%)
Query: 6 WTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLATFEV 65
W ++SS+NSL+EV++LY G L+K R +FV+G+++DI N+ +LM YCA+D AT
Sbjct: 337 WLDISSVNSLAEVHRLYVGGPPLEKEPRELFVKGTMKDIRENFQDLMQYCAQDVWATH-- 394
Query: 66 IQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLAGML 125
EV Q PLFLER PHPVTLAGML
Sbjct: 395 ------------------------------------EVFQQQLPLFLERCPHPVTLAGML 418
Query: 126 ELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDKYKDSLWLWDQ 185
E+ +YLPVN NW +Y E+ T+ +L EMK LMD + AC LL ++YK+ WLWD
Sbjct: 419 EMGVSYLPVNQNWERYLAEAQGTYEELQREMKKSLMDLANDACQLLSGERYKEDPWLWDL 478
Query: 186 DWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQT-------EDEFVK--RRREL 236
+W +++ K KK ++ P E + DQ E+EF + R
Sbjct: 479 EWDLQEFKQKKAKKVKKEPATASKLPIEGARAPGDPMDQEDLGPCSEEEEFQQDVMARAC 538
Query: 237 VEKFKPLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAW 296
++K K T + LP +L G+P WYRKLC + + D AW
Sbjct: 539 LQKLK---GTTELLPKRPQHLPGHPGWYRKLCPR------------------LDDP--AW 575
Query: 297 IPGPSLISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTD--IKVPDAENI----- 349
PGPSL+S M++TPKL++LTW PLH+ HGWGYLVP D K+P +
Sbjct: 576 TPGPSLLSLQMRVTPKLMALTWDGFPLHYSERHGWGYLVPGRRDNLAKLPTGTTLESAGV 635
Query: 350 --PLEQLKQLY---------NNITKQDNCEAN----VDNAQ--------NSLRDSVETNI 386
P ++ LY +T Q+ A DN+ + L E +
Sbjct: 636 VCPYRAIESLYRKHCLEQGKQQLTPQEAGLAEEFLLTDNSAIWQTVEELDYLEVEAEAKM 695
Query: 387 SFIDCSKSAKRLEVIANVLDKKKLAEASSTDTSTDDADTPREIGFIKLPHKDGEHLNVGN 446
+ + + L + A K + +D D P F KLPHKDG NVG+
Sbjct: 696 ENLRAAVPGQPLALTAPGGPKDSQPNYHHGNGPYNDVDIP-GCWFFKLPHKDGNSCNVGS 754
Query: 447 PLSRDFINKFSDNSLAGVDIGAK--RIIEISRMLSYWRNNHERVKKQFVVWLNKKDLPRR 504
P ++DF+ K D +L GA R +EI++M+S+WRN H+R+ Q VVWL + LPR
Sbjct: 755 PFAKDFLPKMEDGTLQAGPGGASGPRALEINKMISFWRNAHKRISSQMVVWLPRSALPRA 814
Query: 505 LVE--NIESEGRDYGVILPQLIVSGTLTRRAVEATWMTASNAVGERVGSELRAMIQAPDG 562
++ + + EG YG ILPQ++ +GT+TRRAVE TW+TASNA +RVGSEL+AM+QAP G
Sbjct: 815 VIRHPDYDEEGL-YGAILPQVVTAGTITRRAVEPTWLTASNARPDRVGSELKAMVQAPPG 873
Query: 563 YSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMHSITAKAVGISR 622
Y+++GADVDSQELWIA+V+GD++ A HG T GWMTL G+KS TD+HS TA VGISR
Sbjct: 874 YTLVGADVDSQELWIAAVLGDAHFAGMHGCTAFGWMTLQGRKSRGTDLHSKTATTVGISR 933
Query: 623 EHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKGKKLYRLKDGHLE 682
EHAK+ NY RIYGAG+ FAERLL QFN +++ +A KA++MY +TKG + YRL D E
Sbjct: 934 EHAKVFNYGRIYGAGQPFAERLLMQFNHRLTQQEAAEKAQQMYAVTKGLRWYRLSD-EGE 992
Query: 683 ELIKRVY----------------SKYEAREVCSAYNTSVDKIFDKPQWYGGTESAMFNRL 726
L++ ++ K + +Y + I ++ W GGTES MFN+L
Sbjct: 993 WLVRELHLPVDRTEDGWISLQDLRKVQREAARKSYWKKWEVIAER-AWKGGTESEMFNKL 1051
Query: 727 EEIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLVCMRWLV 786
E IATS P TP L CR+SRALEP S +F+ +R+NWVVQS AVD+LHLMLV M+WL
Sbjct: 1052 ESIATSDIPRTPVLGCRISRALEP-SAVQGEFMTSRVNWVVQSSAVDYLHLMLVAMKWLF 1110
Query: 787 SR---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIPLSISFF 843
D RF ISIHDE+RYLV +E++Y ALAL +TNLLTR KL + D+P S++FF
Sbjct: 1111 EEFAIDGRFCISIHDEVRYLVREEDRYRAALALQITNLLTRCMFAYKLGLNDLPQSVAFF 1170
Query: 844 SGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKANGVI 894
S V+ID+ LRKE DCKTPSNP G+ + YGIP GE LDIYQ I+ G +
Sbjct: 1171 SAVDIDRCLRKEVTMDCKTPSNPTGMERRYGIPQGEALDIYQIIELTKGSL 1221
>gi|383419307|gb|AFH32867.1| DNA polymerase subunit gamma-1 [Macaca mulatta]
Length = 1228
Score = 726 bits (1873), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/950 (42%), Positives = 543/950 (57%), Gaps = 126/950 (13%)
Query: 6 WTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLATFEV 65
W ++SS+NSL+EV++LY G L+K R +FV+G+++DI N+ +LM YCA+D AT
Sbjct: 336 WLDISSVNSLAEVHRLYVGGPPLEKEPRELFVKGTMKDIRENFQDLMQYCAQDVWATH-- 393
Query: 66 IQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLAGML 125
EV Q PLFLER PHPVTLAGML
Sbjct: 394 ------------------------------------EVFQQQLPLFLERCPHPVTLAGML 417
Query: 126 ELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDKYKDSLWLWDQ 185
E+ +YLPVN NW +Y E+ T+ +L EMK LMD + AC LL ++YK+ WLWD
Sbjct: 418 EMGVSYLPVNQNWERYLAEAQGTYEELQREMKKSLMDLANDACQLLSGERYKEDPWLWDL 477
Query: 186 DWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQT-------EDEFVK--RRREL 236
+W +++ K KK ++ P + DQ E+EF + R
Sbjct: 478 EWDLQEFKQKKAKKVKKEPATASKLPINGAGAPGDPMDQEDLGPRSEEEEFQQDVMARAC 537
Query: 237 VEKFKPLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAW 296
++K K T + LP +L G+P WYRKLC + + D AW
Sbjct: 538 LQKLK---GTTELLPKRPQHLPGHPGWYRKLCPR------------------LDDP--AW 574
Query: 297 IPGPSLISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTD--IKVPDAENI----- 349
PGPSL+S M++TPKL++LTW PLH+ HGWGYLVP D K+P +
Sbjct: 575 TPGPSLLSLQMRVTPKLMALTWDGFPLHYSERHGWGYLVPGRRDNLAKLPTGTTLESAGV 634
Query: 350 --PLEQLKQLY---------NNITKQDNCEAN----VDNAQ--------NSLRDSVETNI 386
P ++ LY +T Q+ A DN+ + L E +
Sbjct: 635 VCPYRAIESLYRKHCLEQGKQQLTPQEAGLAEEFLLTDNSAIWQTVEELDYLEVEAEAKM 694
Query: 387 SFIDCSKSAKRLEVIANVLDKKKLAEASSTDTSTDDADTPREIGFIKLPHKDGEHLNVGN 446
+ + + L + A K + +D D P F KLPHKDG NVG+
Sbjct: 695 ENLRAAVPGQPLALTAPGGPKDSQPNYHHGNGPYNDVDIP-GCWFFKLPHKDGNSCNVGS 753
Query: 447 PLSRDFINKFSDNSLAGVDIGAK--RIIEISRMLSYWRNNHERVKKQFVVWLNKKDLPRR 504
P ++DF+ K D +L GA R +EI++M+S+WRN H+R+ Q VVWL + LPR
Sbjct: 754 PFAKDFLPKMEDGTLQAGPGGASGPRALEINKMISFWRNAHKRISSQMVVWLPRSALPRA 813
Query: 505 LVE--NIESEGRDYGVILPQLIVSGTLTRRAVEATWMTASNAVGERVGSELRAMIQAPDG 562
++ + + EG YG ILPQ++ +GT+TRRAVE TW+TASNA +RVGSEL+AM+QAP G
Sbjct: 814 VIRHPDYDEEGL-YGAILPQVVTAGTITRRAVEPTWLTASNARPDRVGSELKAMVQAPPG 872
Query: 563 YSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMHSITAKAVGISR 622
Y+++GADVDSQELWIA+V+GD++ A HG T GWMTL G+KS TD+HS TA VGISR
Sbjct: 873 YTLVGADVDSQELWIAAVLGDAHFAGMHGCTAFGWMTLQGRKSRGTDLHSKTATTVGISR 932
Query: 623 EHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKGKKLYRLKDGHLE 682
EHAK+ NY RIYGAG+ FAERLL QFN +++ +A KA++MY +TKG + YRL D E
Sbjct: 933 EHAKVFNYGRIYGAGQPFAERLLMQFNHRLTQQEAAEKAQQMYAVTKGLRWYRLSD-EGE 991
Query: 683 ELIKRVYSKYE---------------AREVCSAYNTSVDKIFDKPQWYGGTESAMFNRLE 727
L++ ++ + RE + ++ + W GGTES MFN+LE
Sbjct: 992 WLVRELHLPVDRTEGGWISLQDLRKVQREAARKSHRKKWEVIAERAWKGGTESEMFNKLE 1051
Query: 728 EIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLVCMRWLVS 787
IATS P TP L CR+SRALEP S +F+ +R+NWVVQS AVD+LHLMLV M+WL
Sbjct: 1052 SIATSDIPRTPVLGCRISRALEP-SAVQGEFMTSRVNWVVQSSAVDYLHLMLVAMKWLFE 1110
Query: 788 R---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIPLSISFFS 844
D RF ISIHDE+RYLV +E++Y ALAL +TNLLTR KL + D+P S++FFS
Sbjct: 1111 EFAIDGRFCISIHDEVRYLVREEDRYRAALALQITNLLTRCMFAYKLGLNDLPQSVAFFS 1170
Query: 845 GVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKANGVI 894
V+ID+ LRKE DCKTPSNP G+ + YGIP GE LDIYQ I+ G +
Sbjct: 1171 AVDIDRCLRKEVTMDCKTPSNPTGMERRYGIPQGEALDIYQIIELTKGSL 1220
>gi|296204096|ref|XP_002749184.1| PREDICTED: DNA polymerase subunit gamma-1 [Callithrix jacchus]
Length = 1229
Score = 726 bits (1873), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/950 (42%), Positives = 543/950 (57%), Gaps = 126/950 (13%)
Query: 6 WTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLATFEV 65
W N+SS+NSL+EV+ LY G L+K R +FV+GS++DI N+ +LM YCA+D AT
Sbjct: 337 WLNISSVNSLAEVHSLYVGGPHLEKEPRELFVKGSMKDIRENFQDLMQYCAQDVWATH-- 394
Query: 66 IQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLAGML 125
EV Q PLFLER PHPVTLAGML
Sbjct: 395 ------------------------------------EVFQQQLPLFLERCPHPVTLAGML 418
Query: 126 ELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDKYKDSLWLWDQ 185
E+ +YLPVN NW +Y E+ T+ +L EMK LMD + AC LL ++YK+ WLWD
Sbjct: 419 EMGVSYLPVNQNWERYLVEAQGTYEELQREMKKSLMDLANDACQLLSGERYKEDPWLWDL 478
Query: 186 DWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQT-------EDEFVK--RRREL 236
+W +++ K KK ++ P E + DQ E+EF + R
Sbjct: 479 EWDLQEFKQKKARKVKKEPATASKLPIEGPGAPGDPMDQEDLGPPSEEEEFQQDVASRAC 538
Query: 237 VEKFKPLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAW 296
++K K T + LP +L G+P WYRKLC + + D AW
Sbjct: 539 LQKLK---GTTELLPKRPQHLPGHPGWYRKLCPR------------------LDDP--AW 575
Query: 297 IPGPSLISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTD-----IKVPDAEN--- 348
PGPSL+S M++TPKL++LTW PLH+ HGWGYLVP D + P E+
Sbjct: 576 TPGPSLLSLQMRVTPKLMALTWDGFPLHYSERHGWGYLVPGRRDNLAKLLAGPTLESAGV 635
Query: 349 -IPLEQLKQLY---------NNITKQDNCEAN----VDNAQ--------NSLRDSVETNI 386
P ++ LY +T Q+ A DN+ + L E +
Sbjct: 636 VCPYRAIESLYRKHCLEQGKQQLTPQEASLAEEFLFTDNSTIWQTLEELDYLEVEAEAKM 695
Query: 387 SFIDCSKSAKRLEVIANVLDKKKLAEASSTDTSTDDADTPREIGFIKLPHKDGEHLNVGN 446
+ + + L + A K + +D D P F KLPHKDG + NVG+
Sbjct: 696 ENLRAAVPGQPLALTAPGGPKDSQPTYHHGNGPYNDVDVP-GCWFFKLPHKDGNNYNVGS 754
Query: 447 PLSRDFINKFSDNSLAGVDIGAK--RIIEISRMLSYWRNNHERVKKQFVVWLNKKDLPRR 504
P ++DF+ K D +L GA R +EI++M+S+WRN H+R+ Q VVWL + LPR
Sbjct: 755 PFAKDFLPKMEDGTLQAGPGGASGPRALEINKMISFWRNAHKRISSQMVVWLPRSALPRA 814
Query: 505 LVE--NIESEGRDYGVILPQLIVSGTLTRRAVEATWMTASNAVGERVGSELRAMIQAPDG 562
++ + + EG YG ILPQ++ +GT+TRRAVE TW+TASNA +RVGSEL+AM+QAP G
Sbjct: 815 VIRHPDYDEEGL-YGAILPQVVTAGTITRRAVEPTWLTASNARPDRVGSELKAMVQAPPG 873
Query: 563 YSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMHSITAKAVGISR 622
Y+++GADVDSQELWIA+V+GD++ A HG T GWMTL G+KS TD+HS TA VGISR
Sbjct: 874 YTLVGADVDSQELWIAAVLGDAHFAGMHGCTAFGWMTLQGRKSRGTDLHSKTATTVGISR 933
Query: 623 EHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKGKKLYRLKDGHLE 682
EHAK+ NY RIYGAG+ FAERLL QFN +++ +A KA++MY +TKG + YRL + E
Sbjct: 934 EHAKVFNYGRIYGAGQPFAERLLMQFNHRLTRQEAAEKAQQMYAVTKGLRRYRLSE-EGE 992
Query: 683 ELIKRVYSKYE---------------AREVCSAYNTSVDKIFDKPQWYGGTESAMFNRLE 727
L++ ++ + RE ++ + W GGTES MFN+LE
Sbjct: 993 WLVRELHLPVDRIEGGWISLQDLRKVQREASRKSRWKKWEVVAERAWMGGTESEMFNKLE 1052
Query: 728 EIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLVCMRWLVS 787
IATS P TP L CR+SRALEP S +F+ +R+NWVVQS AVD+LHLMLV M+WL
Sbjct: 1053 SIATSDIPCTPVLGCRISRALEP-SVVQGEFMTSRVNWVVQSSAVDYLHLMLVAMKWLFE 1111
Query: 788 R---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIPLSISFFS 844
D RF ISIHDE+RYLV +E++Y ALAL +TNLLTR KL + D+P S++FFS
Sbjct: 1112 EFAIDGRFCISIHDEVRYLVREEDRYRAALALQITNLLTRCMFAYKLGLNDLPQSVAFFS 1171
Query: 845 GVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKANGVI 894
V+ID+ LRKE DCKTPSNP G+ + YGIP GE LDIYQ I+ G +
Sbjct: 1172 AVDIDRCLRKEVTMDCKTPSNPTGMERRYGIPQGEALDIYQIIELTKGSL 1221
>gi|426380244|ref|XP_004056785.1| PREDICTED: DNA polymerase subunit gamma-1 [Gorilla gorilla gorilla]
Length = 1239
Score = 724 bits (1870), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/950 (42%), Positives = 541/950 (56%), Gaps = 126/950 (13%)
Query: 6 WTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLATFEV 65
W ++SS+NSL+EV++LY G L+K R +FV+G+++DI N+ +LM YCA+D AT
Sbjct: 347 WLDISSVNSLAEVHRLYVGGPPLEKEPRELFVKGTMKDIRENFQDLMQYCAQDVWATH-- 404
Query: 66 IQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLAGML 125
EV Q PLFLER PHPVTLAGML
Sbjct: 405 ------------------------------------EVFQQQLPLFLERCPHPVTLAGML 428
Query: 126 ELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDKYKDSLWLWDQ 185
E+ +YLPVN NW +Y E+ T+ +L EMK LMD + AC LL ++YK+ WLWD
Sbjct: 429 EMGVSYLPVNQNWERYLAEAQGTYEELQREMKKSLMDLANDACQLLSGERYKEDPWLWDL 488
Query: 186 DWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQT-------EDEFVK--RRREL 236
+W +++ K KK ++ P E + DQ E+EF + R
Sbjct: 489 EWDLQEFKQKKAKKVKKEPATASKLPIEGAGAPGDPMDQEDLGPRSEEEEFQQDVMARAC 548
Query: 237 VEKFKPLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAW 296
++K K T + LP +L G+P WYRKLC + + D AW
Sbjct: 549 LQKLK---GTTELLPKRPQHLPGHPGWYRKLCPR------------------LDDP--AW 585
Query: 297 IPGPSLISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTD--IKVPDAENI----- 349
PGPSL+S M++TPKL++LTW PLH+ HGWGYLVP D K+P +
Sbjct: 586 TPGPSLLSLQMRVTPKLMALTWDGFPLHYSERHGWGYLVPGRRDNVAKLPTGTTLESAGV 645
Query: 350 --PLEQLKQLY---------NNITKQDNCEAN----VDNAQ--------NSLRDSVETNI 386
P ++ LY + Q+ A DN+ + L E +
Sbjct: 646 VCPYRAIESLYRKHCLEQGKQQLMPQEAGLAEEFLLTDNSAIWQTVEELDYLEVEAEAKM 705
Query: 387 SFIDCSKSAKRLEVIANVLDKKKLAEASSTDTSTDDADTPREIGFIKLPHKDGEHLNVGN 446
+ + + L + A K + +D D P F KLPHKDG NVG+
Sbjct: 706 DNLRAAVPGQPLALTARGGPKDTQPSYHHGNGPYNDVDIP-GCWFFKLPHKDGNSCNVGS 764
Query: 447 PLSRDFINKFSDNSLAGVDIGAK--RIIEISRMLSYWRNNHERVKKQFVVWLNKKDLPRR 504
P ++DF+ K D +L GA R +EI++M+S+WRN H+R+ Q VVWL + LPR
Sbjct: 765 PFAKDFLPKMEDGTLQAGPGGASGPRALEINKMISFWRNAHKRISSQMVVWLPRSALPRA 824
Query: 505 LVE--NIESEGRDYGVILPQLIVSGTLTRRAVEATWMTASNAVGERVGSELRAMIQAPDG 562
++ + + EG YG ILPQ++ +GT+TRRAVE TW+TASNA +RVGSEL+AM+QAP G
Sbjct: 825 VIRHPDYDEEGL-YGAILPQVVTAGTITRRAVEPTWLTASNARPDRVGSELKAMVQAPPG 883
Query: 563 YSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMHSITAKAVGISR 622
Y+++GADVDSQELWIA+V+GD++ A HG T GWMTL G+KS TD+HS TA VGISR
Sbjct: 884 YTLVGADVDSQELWIAAVLGDAHFAGMHGCTAFGWMTLQGRKSRGTDLHSKTATTVGISR 943
Query: 623 EHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKGKKLYRLKDGHLE 682
EHAKI NY RIYGAG+ FAERLL QFN +++ +A KA++MY TKG + YRL D E
Sbjct: 944 EHAKIFNYGRIYGAGQPFAERLLMQFNHRLTQQEAAEKAQQMYAATKGLRWYRLSD-EGE 1002
Query: 683 ELIKRVYSKYE---------------AREVCSAYNTSVDKIFDKPQWYGGTESAMFNRLE 727
L++ ++ + RE ++ + W GGTES MFN+LE
Sbjct: 1003 WLVRELHLPVDRTEGGWISLQDLRKVQRETARKSQWKKWEVVAERAWKGGTESEMFNKLE 1062
Query: 728 EIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLVCMRWLVS 787
IATS P TP L CR+SRALEP S +F+ +R+NWVVQS AVD+LHLMLV M+WL
Sbjct: 1063 SIATSDIPRTPVLGCRISRALEP-SAVQEEFMTSRVNWVVQSSAVDYLHLMLVAMKWLFE 1121
Query: 788 R---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIPLSISFFS 844
D RF ISIHDE+RYLV +E++Y ALAL +TNLLTR KL + D+P S++FFS
Sbjct: 1122 EFAIDGRFCISIHDEVRYLVREEDRYRAALALQITNLLTRCMFAYKLGLNDLPQSVAFFS 1181
Query: 845 GVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKANGVI 894
V+ID+ LRKE DCKTPSNP G+ + YGIP GE LDIYQ I+ G +
Sbjct: 1182 AVDIDRCLRKEVTMDCKTPSNPTGMERRYGIPQGEALDIYQIIELTKGSL 1231
>gi|149690747|ref|XP_001503097.1| PREDICTED: DNA polymerase subunit gamma-1 [Equus caballus]
Length = 1219
Score = 724 bits (1870), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/950 (42%), Positives = 540/950 (56%), Gaps = 125/950 (13%)
Query: 6 WTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLATFEV 65
W ++SS+N+L++V+ LY G L+K R +FV+GS++DI N+ +LM YCA+D AT
Sbjct: 326 WLDISSVNNLADVHSLYVGGPALEKEPRELFVKGSMKDIRENFQDLMQYCAQDVWAT--- 382
Query: 66 IQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLAGML 125
+E+ Q PLFLER PHPVTLAGML
Sbjct: 383 -----------------------------------YEIFQQQLPLFLERCPHPVTLAGML 407
Query: 126 ELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDKYKDSLWLWDQ 185
E+ +YLPVN NW +Y E+ T+ +L EMK LMD + AC LL ++YK+ WLWD
Sbjct: 408 EMGVSYLPVNQNWERYLAEAQSTYEELQREMKKSLMDLANDACQLLSGERYKEDPWLWDL 467
Query: 186 DWSVKDLKLK--------KKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVK--RRRE 235
+W +++ K K + A + + P + + G E+EF + R
Sbjct: 468 EWDLQEFKQKKAKKVKRKEPATASKLPIEGAGAPGDPKDQEDPGPPSEEEEFQRDVTARA 527
Query: 236 LVEKFKPLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEA 295
+E+ K T + LP +L G+P WYRKLC + + D A
Sbjct: 528 CLEQLK---GTTELLPKRPQHLPGHPGWYRKLCPR------------------LDDP--A 564
Query: 296 WIPGPSLISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTD--IKVP-DAE----- 347
W PGPSL+S M++TPKL++LTW PLH+ HGWGYLVP D VP DA
Sbjct: 565 WTPGPSLLSLQMRVTPKLMALTWDGFPLHYSEQHGWGYLVPGRRDNLADVPADAALASAG 624
Query: 348 -NIPLEQLKQLYN-NITKQDNCEANVDNAQNS----LRDS----------------VETN 385
P ++ LY + +Q + A S L DS E
Sbjct: 625 VACPYRAIESLYRKHCLEQGKQHPELQEAGLSEEFLLTDSSAMWQTVEELGCLEVEAEAK 684
Query: 386 ISFIDCSKSAKRLEVIANVLDKKKLAEASSTDTSTDDADTPREIGFIKLPHKDGEHLNVG 445
+ S++ + A K + +D D P F KLPHKDG NVG
Sbjct: 685 TEYFRAVVSSQPPALTAAGGPKGSQPAYHHGNGPYNDVDIP-GCWFFKLPHKDGNSCNVG 743
Query: 446 NPLSRDFINKFSDNSLAGVDIGAK--RIIEISRMLSYWRNNHERVKKQFVVWLNKKDLPR 503
+P ++DF+ K D +L GA R +EI++M+S+WRN H+R+ Q VVWL + LPR
Sbjct: 744 SPFAKDFLPKMEDGTLQAGPGGASGPRALEINKMISFWRNAHKRISSQMVVWLPRSALPR 803
Query: 504 RLVE--NIESEGRDYGVILPQLIVSGTLTRRAVEATWMTASNAVGERVGSELRAMIQAPD 561
+ + + EGR YG ILPQ++ +GT+TRRAVE TW+TASNA +RVGSE++AM+QAP
Sbjct: 804 AVTRHPDYDEEGR-YGAILPQVVTAGTITRRAVEPTWLTASNARPDRVGSEMKAMVQAPP 862
Query: 562 GYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMHSITAKAVGIS 621
GY ++GADVDSQELWIA+V+GD++ A HG T GWMTL G+KS TD+HS TA VGIS
Sbjct: 863 GYVLVGADVDSQELWIAAVLGDAHFAGMHGCTAFGWMTLQGRKSRGTDLHSKTAATVGIS 922
Query: 622 REHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKGKKLYRLKD--- 678
REHAKI NY RIYGAG+ FAERLL QFN +++ +A KA++MY +TKG + YRL D
Sbjct: 923 REHAKIFNYGRIYGAGQPFAERLLMQFNHRLTRQEAAEKAQQMYAVTKGLRRYRLSDEGE 982
Query: 679 ---GHLEELIKRVYSKYEA--------REVCSAYNTSVDKIFDKPQWYGGTESAMFNRLE 727
L+ + R + + RE N ++ + W GGTES MFN+LE
Sbjct: 983 WLVRELDLPVDRTEDGWVSLQDLRKIQREASRKSNWKKWEVVAERAWMGGTESEMFNKLE 1042
Query: 728 EIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLVCMRWLVS 787
IATS P TP L CR+SRALEP S +F+ +R+NWVVQS AVD+LHLMLV M+WL
Sbjct: 1043 SIATSDTPCTPVLGCRISRALEP-SAVQGEFMTSRVNWVVQSSAVDYLHLMLVAMKWLFE 1101
Query: 788 R---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIPLSISFFS 844
D RF ISIHDE+RYLV +E++Y ALAL +TNLLTR KL + D+P S++FFS
Sbjct: 1102 EFAIDGRFCISIHDEVRYLVREEDRYRAALALQITNLLTRCMFAYKLGLNDLPQSVAFFS 1161
Query: 845 GVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKANGVI 894
V+ID+ LRKE DCKTPSNP G+ + YGIP GE LDIYQ I+ G +
Sbjct: 1162 AVDIDQCLRKEVTMDCKTPSNPTGMERRYGIPQGEALDIYQIIELTKGSL 1211
>gi|215509404|gb|EEC18857.1| DNA polymerase gamma, putative [Ixodes scapularis]
Length = 1055
Score = 724 bits (1869), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/901 (44%), Positives = 524/901 (58%), Gaps = 111/901 (12%)
Query: 4 ESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLATF 63
E W ++SSLN+L +VY LY GKVL K R+ F+ GSL DI ++ LMTYCA D LA
Sbjct: 244 EMWQDLSSLNNLGDVYALYSGGKVLKKEARDTFLNGSLGDIAADFQGLMTYCANDVLA-- 301
Query: 64 EVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLAG 123
T EV+ L PL+ ERFPHP++ AG
Sbjct: 302 ------------------------------------THEVLSKLLPLYFERFPHPISFAG 325
Query: 124 MLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDKYKDSLWLW 183
MLE+STAYLPVN NW +Y +++ + D+ E+K L + AC LLH + YK WLW
Sbjct: 326 MLEMSTAYLPVNQNWERYLSDAEAVYQDVQQELKQTLAGIANSACRLLHGNAYKRDPWLW 385
Query: 184 DQDWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRRELVEKFKPL 243
D DWSV++++ KK A +V T + + D+ + E R L E+ K +
Sbjct: 386 DLDWSVQNMRCKKSAANKCAVKGHT--------VVETQTDKGDLE-----RGLEEEVKDI 432
Query: 244 MQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIPGPSLI 303
++T + L +L GYP WYR CVKP D W PGPS+I
Sbjct: 433 LKTSEALYKTQPFLSGYPAWYRDFCVKPPD-----------------DEDSDWEPGPSVI 475
Query: 304 STSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTD---IKVP----DAENIPLEQLKQ 356
ST M+ PKLL L W PLHF GWGYLVP + VP D+E E+ K
Sbjct: 476 STQMRSVPKLLRLKWDGYPLHFDMKQGWGYLVPREQKDGTVVVPSLAEDSEAKGDEKPKF 535
Query: 357 LYNNITKQDNCEANVDNAQNSLRDSVETNISFIDCSKSAKRL-EVIANVLDKKKLAEASS 415
K E D+ + I AK +V+ N ++ E
Sbjct: 536 PLPEFLKACGYEDVKDDLGPKDTGLQWQQLGNIPEEGEAKLWRKVLGNRTRPPQVKENLD 595
Query: 416 TDTSTDDADTPREIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSL-AGVDIGAKRIIEI 474
D D F +LPHKDG H VGNPL++DF+ K +D L AG + A R++ +
Sbjct: 596 MDVDIDGCY------FFRLPHKDGPHKRVGNPLAKDFLTKVTDGILQAGDNPQANRVLLL 649
Query: 475 SRMLSYWRNNHERVKKQFVVWLNKKDLPRRLVENIESEGRDYGVILPQLIVSGTLTRRAV 534
S+++SYW+N +R+ Q VVW K DLP + + S DYGVILP+LI +GT+TRRAV
Sbjct: 650 SKIISYWKNARDRIASQMVVWFTKSDLPEIIHDRDSS---DYGVILPRLIPAGTVTRRAV 706
Query: 535 EATWMTASNAVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATP 594
E TW+TASNA +RVGSEL++M+QAP GY I+GADVDSQELWIAS++ D++ A+ HG T
Sbjct: 707 EPTWLTASNAYKDRVGSELKSMVQAPKGYHIVGADVDSQELWIASILADAHFAEMHGCTA 766
Query: 595 LGWMTLSGQKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSK 654
+GWMTL G K+ TDMHS TA +VGISR+ AK+INYARIYGAG+ FA+RLL QFN +
Sbjct: 767 IGWMTLQGNKAVGTDMHSRTATSVGISRDQAKVINYARIYGAGQPFAQRLLMQFNHRLDA 826
Query: 655 SDAKSKARKMYTLTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQW 714
+A +KA+KMY TKG ++ + E++ E ++V V W
Sbjct: 827 QEASTKAKKMYAQTKGVRV------AVPEVV-------EGQQVFVRGKRKV--------W 865
Query: 715 YGGTESAMFNRLEEIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDF 774
GG+ES MFN+LE IA S +P TP L CR+SRALEP + D+ F +RINWVVQS AVD+
Sbjct: 866 EGGSESHMFNKLEAIADSEEPRTPVLGCRISRALEPAAV-DTNFFNSRINWVVQSSAVDY 924
Query: 775 LHLMLVCMRWLV---SRDTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKL 831
LHLML+ MRWL+ + RF +SIHDE+R+LV E++Y ALAL VTNLLTRAF KL
Sbjct: 925 LHLMLITMRWLMDDYAIQGRFAVSIHDEVRFLVASEDRYRAALALQVTNLLTRAFFAWKL 984
Query: 832 DMTDIPLSISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKAN 891
M D+P S++FFS VE+D VLRKE D DC TPSNP+GL KGYGIP GE LDIY ++K
Sbjct: 985 GMRDLPQSVAFFSSVEVDTVLRKEVDMDCVTPSNPHGLKKGYGIPAGEALDIYAVLEKTE 1044
Query: 892 G 892
G
Sbjct: 1045 G 1045
>gi|403258230|ref|XP_003921677.1| PREDICTED: LOW QUALITY PROTEIN: DNA polymerase subunit gamma-1
[Saimiri boliviensis boliviensis]
Length = 1216
Score = 723 bits (1867), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/950 (42%), Positives = 547/950 (57%), Gaps = 126/950 (13%)
Query: 6 WTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLATFEV 65
W N+SS+NSL+EV+ LY G L+K R +FV+GS++DI N+ +LM YCA+D AT
Sbjct: 324 WLNISSVNSLAEVHSLYVGGPRLEKEPRELFVKGSMKDIRENFQDLMQYCAQDVWATH-- 381
Query: 66 IQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLAGML 125
EV Q PLFLER PHPVTLAGML
Sbjct: 382 ------------------------------------EVFQQQLPLFLERCPHPVTLAGML 405
Query: 126 ELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDKYKDSLWLWDQ 185
E+ +YLPVN NW +Y E+ T+ +L EMK LMD + AC LL ++YK+ WLWD
Sbjct: 406 EMGVSYLPVNQNWERYLVEAQGTYEELQREMKKSLMDLANDACQLLSGERYKEDPWLWDL 465
Query: 186 DWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQ------TEDEFVKRRRELVEK 239
+W +++ K KK ++ P E + DQ +E+E ++
Sbjct: 466 EWDLQEFKQKKARKVKKEPATVSKLPIEGPGAPGDPMDQEDLGPPSEEEEFQQDVAARAC 525
Query: 240 FKPLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIPG 299
+ L T + LP +L G+P WYRKLC + + D AW PG
Sbjct: 526 LQKLEGTTELLPKRPQHLPGHPGWYRKLCPR------------------LDDP--AWTPG 565
Query: 300 PSLISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTD-----IKVPDAEN----IP 350
PSL+S M++TPKL++LTW PLH+ HGWGYLVP D + P E+ P
Sbjct: 566 PSLLSLQMRVTPKLMALTWDGFPLHYSERHGWGYLVPGRRDNLAKLLAGPTPESAGVVCP 625
Query: 351 LEQLKQLY---------NNITKQDNCEAN----VDNAQNSLRDSVETNISFIDCSKSAKR 397
++ LY +T Q+ A DN +++ ++E + +++ AK
Sbjct: 626 YRAIESLYRKHCLEQGKQQLTPQEAGLAEEFLFTDN--SAMWQTLE-ELDYLEVEAEAKM 682
Query: 398 LEVIANVLDKKKLAEASSTDTST-----------DDADTPREIGFIKLPHKDGEHLNVGN 446
+ A V D+ A + +D D P F KLPHKDG + NVG+
Sbjct: 683 ENLRAAVPDQPLALTAPGGPKDSQPTYHHGNGPYNDVDVP-GCWFFKLPHKDGNNYNVGS 741
Query: 447 PLSRDFINKFSDNSLAGVDIGAK--RIIEISRMLSYWRNNHERVKKQFVVWLNKKDLPRR 504
P ++DF+ K D +L GA R +EI++M+S+WRN H+R+ Q VVWL + LPR
Sbjct: 742 PFAKDFLPKMEDGTLQAGPGGASGPRALEINKMISFWRNAHKRISSQMVVWLPRSALPRA 801
Query: 505 LVE--NIESEGRDYGVILPQLIVSGTLTRRAVEATWMTASNAVGERVGSELRAMIQAPDG 562
++ + + EG YG ILPQ++ +GT+TRRAVE TW+TASNA +RVGSEL+AM+QAP G
Sbjct: 802 VIRHPDYDEEGL-YGAILPQVVTAGTITRRAVEPTWLTASNARPDRVGSELKAMVQAPPG 860
Query: 563 YSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMHSITAKAVGISR 622
Y+ +GADVDSQELWIA+V+GD++ A HG T GWMTL G+KS TD+HS TA VGISR
Sbjct: 861 YAFVGADVDSQELWIAAVLGDAHFAGMHGCTAFGWMTLQGRKSRGTDLHSKTATTVGISR 920
Query: 623 EHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKGKKLYRLKDGHLE 682
EHAK+ NY RIYGAG+ FAERLL QFN +++ +A KA++MY +TKG + YRL + E
Sbjct: 921 EHAKVFNYGRIYGAGQPFAERLLMQFNHRLTRQEAAEKAQQMYAVTKGLRRYRLSE-EGE 979
Query: 683 ELIKRVYSKYE---------------AREVCSAYNTSVDKIFDKPQWYGGTESAMFNRLE 727
L++ ++ + RE + ++ + W GGTES MFN+LE
Sbjct: 980 WLVRELHLPVDRTEGGWISLQDLRKVQRETSRKSHWKKWELVAERAWMGGTESEMFNKLE 1039
Query: 728 EIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLVCMRWLVS 787
IATS P TP L CR+SRALEP S +F+ +R+NWVVQS AVD+LHLMLV M+WL
Sbjct: 1040 SIATSDIPRTPVLGCRISRALEP-SAVQGEFMTSRVNWVVQSSAVDYLHLMLVAMKWLFE 1098
Query: 788 R---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIPLSISFFS 844
D RF ISIHDE+RYLV +E++Y ALAL +TNLLTR KL + D+P S++FFS
Sbjct: 1099 EFAIDGRFCISIHDEVRYLVREEDRYRAALALQITNLLTRCMFAYKLGLNDLPQSVAFFS 1158
Query: 845 GVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKANGVI 894
V+ID+ LRKE DCKTPSNP G+ + YGIP GE LDIYQ I+ G +
Sbjct: 1159 AVDIDRCLRKEVTMDCKTPSNPTGMERRYGIPQGEALDIYQIIELTKGSL 1208
>gi|348579053|ref|XP_003475296.1| PREDICTED: LOW QUALITY PROTEIN: DNA polymerase subunit gamma-1-like
[Cavia porcellus]
Length = 1212
Score = 722 bits (1863), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/941 (43%), Positives = 542/941 (57%), Gaps = 117/941 (12%)
Query: 6 WTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLATFEV 65
W ++SS N+L++V+ LY G L+K R +F++GS+ DI N+ +LM YCA+D AT
Sbjct: 329 WVDISSANNLADVHSLYVGGPPLEKEARELFIKGSMRDIRENFQDLMRYCAQDVWAT--- 385
Query: 66 IQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLAGML 125
+EV Q PLFLER PHPVTLAGML
Sbjct: 386 -----------------------------------YEVFQQQLPLFLERCPHPVTLAGML 410
Query: 126 ELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDKYKDSLWLWDQ 185
E+ +YLPVN NW +Y E+ T+ +L EMK LMD + AC LL ++YK+ WLWD
Sbjct: 411 EMGVSYLPVNQNWDRYLEEAQSTYEELQREMKKSLMDLANDACQLLSGERYKEDPWLWDL 470
Query: 186 DWSVKDLKLKKKANKTLSVD--------QETEEPEEFYEINKNGEDQTEDEFVKR--RRE 235
+W +++ K KK + + P + + G E+E+ + R
Sbjct: 471 EWDLQEFKQKKTKKVKKAEPVTASKLPIEGAGAPGDPTDQEDPGPPSEEEEYWQNVTARA 530
Query: 236 LVEKFKPLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEA 295
L+++ K T + LP S +L G+P WYRKLC P D +
Sbjct: 531 LLQQLK---DTTEILPKRSQHLPGHPGWYRKLC--PRLEDPE------------------ 567
Query: 296 WIPGPSLISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTD--IKVPDAENIPLEQ 353
W PGPSL+S M++TPKL++LTW PLH+ HGWGYLVP D K P
Sbjct: 568 WTPGPSLLSLQMRVTPKLMALTWDGFPLHYSERHGWGYLVPGRRDNLAKESAGAACPYRA 627
Query: 354 LKQLYN-NITKQDNCEANVDNAQNS----LRDSVETNISFIDCS----KSAKRLEVIANV 404
++ LY + KQ + A + L DS+ + + CS ++ + L
Sbjct: 628 IESLYREHCLKQGKQQLQPQEAGLAEEFLLSDSMWQTVEELGCSDPETETKENLLTAVPA 687
Query: 405 LDKKKLAEASSTDTST---------DDADTPREIGFIKLPHKDGEHLNVGNPLSRDFINK 455
L A + +D D P F KLPHKDG + NVG+P ++DF+ K
Sbjct: 688 LPPALTAAGGPKGSQPTYHYGNGPYNDVDIP-GCWFFKLPHKDGNNFNVGSPFAKDFLPK 746
Query: 456 FSDNSLAGVDIGAK--RIIEISRMLSYWRNNHERVKKQFVVWLNKKDLPRRLVE--NIES 511
D +L GA R +EI++M+S+WRN H+R+ Q VVWL + LPR + N +
Sbjct: 747 MEDGTLQAGPGGASGPRALEINKMISFWRNAHKRISSQMVVWLPRSALPRAVTRHPNYDE 806
Query: 512 EGRDYGVILPQLIVSGTLTRRAVEATWMTASNAVGERVGSELRAMIQAPDGYSIIGADVD 571
EGR YG ILPQ++ +GT+TRRAVE TW+TASNA +RVGSEL+AM+QAP GY ++GADVD
Sbjct: 807 EGR-YGAILPQVVTAGTITRRAVEPTWLTASNARLDRVGSELKAMVQAPPGYVLVGADVD 865
Query: 572 SQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMHSITAKAVGISREHAKIINYA 631
SQELWIA+V+GD++ A HG T GWMTL G+KS+ TD+HS TA VGISREHAK+ NY
Sbjct: 866 SQELWIAAVLGDAHFAGMHGCTAFGWMTLQGKKSSGTDLHSKTASTVGISREHAKVFNYG 925
Query: 632 RIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKGKKLYRLKDGHLEELIKRV--- 688
RIYGAG+ FAERLL QFN ++K A KA++MY +TKG + YRL D E L++++
Sbjct: 926 RIYGAGQPFAERLLMQFNHRLTKQAAAEKAQQMYAVTKGLRWYRLTD-EGEWLVQQLALP 984
Query: 689 --------YSKYEAREVC-SAYNTSVDKIFD---KPQWYGGTESAMFNRLEEIATSLQPV 736
S + R++ A S K +D + W GGTES MFN+LE IA S P
Sbjct: 985 INRTEDGWVSLQDLRKIQREATRKSRRKKWDVAAERAWKGGTESEMFNKLESIAMSDAPR 1044
Query: 737 TPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLVCMRWLVSR---DTRFV 793
TP L CR+SRALEP S +F+ +R+NWVVQS AVD+LHLMLV M+WL D RF
Sbjct: 1045 TPVLGCRISRALEP-SAVQEQFLTSRVNWVVQSSAVDYLHLMLVAMKWLFEEFAIDGRFC 1103
Query: 794 ISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIPLSISFFSGVEIDKVLR 853
ISIHDE+RYLV +E++Y ALAL +TNLLTR KL + D+P S++FFS V+ID+ LR
Sbjct: 1104 ISIHDEVRYLVREEDRYRAALALQITNLLTRCMFAHKLGLNDLPQSVAFFSAVDIDRCLR 1163
Query: 854 KESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKANGVI 894
KE DCKTPSNP G+ + Y IP GE LDIYQ I+ G +
Sbjct: 1164 KEVTMDCKTPSNPTGMERRYRIPQGEALDIYQIIELTKGSL 1204
>gi|441617314|ref|XP_003268536.2| PREDICTED: DNA polymerase subunit gamma-1 [Nomascus leucogenys]
Length = 1226
Score = 722 bits (1863), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/953 (42%), Positives = 546/953 (57%), Gaps = 132/953 (13%)
Query: 6 WTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLATFEV 65
W ++SS+NSL+EV++LY G L+K R +FV+G+++DI N+ +LM YCA+D AT
Sbjct: 334 WLDISSVNSLAEVHRLYVGGPPLEKEPRELFVKGTMKDIRENFQDLMQYCAQDVWATH-- 391
Query: 66 IQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLAGML 125
EV Q PLFLER PHPVTLAGML
Sbjct: 392 ------------------------------------EVFQQQLPLFLERCPHPVTLAGML 415
Query: 126 ELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDKYKDSLWLWDQ 185
E+ +YLPVN NW +Y E+ T+ +L EMK LMD + AC LL ++YKD WLWD
Sbjct: 416 EMGVSYLPVNQNWERYLAEAQGTYEELQREMKKSLMDLANDACQLLSGERYKDDPWLWDL 475
Query: 186 DWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQT-------EDEFVK--RRREL 236
+W +++ K KK ++ P E + DQ E+EF + R
Sbjct: 476 EWDLQEFKQKKAKKVKKDPATASKLPIEGAGAPGDPMDQEDLGPCSEEEEFQQDVMARTC 535
Query: 237 VEKFKPLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAW 296
++K K T + LP +L G+P WYRKLC + + D AW
Sbjct: 536 LQKLK---GTTELLPKRPQHLPGHPGWYRKLCPR------------------LDDP--AW 572
Query: 297 IPGPSLISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTD--IKVPDAENI----- 349
PGPSL+S M++TPKL++LTW PLH+ HGWGYLVP D K+P +
Sbjct: 573 TPGPSLLSLQMRVTPKLMALTWDGFPLHYSERHGWGYLVPGRRDNLAKLPTGTTLESAGV 632
Query: 350 --PLEQLKQLY---------NNITKQDNCEAN----VDNAQNSLRDSVETNISFIDCSKS 394
P ++ LY + Q+ A DN +++ +VE + +++
Sbjct: 633 VCPYRAIESLYRKHCLEQGKQQLMPQEAGLAEEFLLTDN--SAIWQTVE-ELDYLEVEAE 689
Query: 395 AKRLEVIANVLDKK--KLAEASSTDTSTD---------DADTPREIGFIKLPHKDGEHLN 443
AK + A V + A DT + D D P F KLPHKDG N
Sbjct: 690 AKMENLRAAVPGQPLAPTAPGGPKDTQPNYHHGNGPYNDVDIP-GCWFFKLPHKDGNSCN 748
Query: 444 VGNPLSRDFINKFSDNSLAGVDIGAK--RIIEISRMLSYWRNNHERVKKQFVVWLNKKDL 501
VG+P ++DF+ K D +L GA R +EI++M+S+WRN H+R+ Q VVWL + L
Sbjct: 749 VGSPFAKDFLPKMEDGTLQAGPGGASGPRALEINKMISFWRNAHKRISSQMVVWLPRSAL 808
Query: 502 PRRLVE--NIESEGRDYGVILPQLIVSGTLTRRAVEATWMTASNAVGERVGSELRAMIQA 559
PR ++ + + EG YG ILPQ++ +GT+TRRAVE TW+TASNA +RVGSEL+AM+QA
Sbjct: 809 PRAVIRHPDYDEEGL-YGAILPQVVTAGTITRRAVEPTWLTASNARPDRVGSELKAMVQA 867
Query: 560 PDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMHSITAKAVG 619
P GY+++GADVDSQELWIA+V+GD++ A HG T GWMTL G+KS TD+HS TA VG
Sbjct: 868 PPGYTLVGADVDSQELWIAAVLGDAHFAGMHGCTAFGWMTLQGRKSRGTDLHSKTATTVG 927
Query: 620 ISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKGKKLYRLKDG 679
ISREHAK+ NY RIYGAG+ FAERLL QFN +++ +A KA++MY TKG + YRL D
Sbjct: 928 ISREHAKVFNYGRIYGAGQPFAERLLMQFNHRLTQQEAAEKAQQMYAATKGLRWYRLSD- 986
Query: 680 HLEELIKRVYSKYE---------------AREVCSAYNTSVDKIFDKPQWYGGTESAMFN 724
E L++ ++ + RE ++ + W GGTES MFN
Sbjct: 987 EGEWLVRELHLPVDRTEGGWISLQDLRKVQREAARKSQWKKWEVAAERAWKGGTESEMFN 1046
Query: 725 RLEEIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLVCMRW 784
+LE IATS P TP L C +SRALEP S +F+ +R+NWVVQS AVD+LHLMLV M+W
Sbjct: 1047 KLESIATSDIPRTPVLGCCISRALEP-SAVQGEFMTSRVNWVVQSSAVDYLHLMLVAMKW 1105
Query: 785 LVSR---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIPLSIS 841
L D RF ISIHDE+RYLV +E++Y ALAL +TNLLTR KL + D+P S++
Sbjct: 1106 LFEEFAIDGRFCISIHDEVRYLVREEDRYRAALALQITNLLTRCMFAYKLGLNDLPQSVA 1165
Query: 842 FFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKANGVI 894
FFS V+ID+ LRKE DCKTPSNP G+ + YGIP GE LDIYQ I+ G +
Sbjct: 1166 FFSAVDIDRCLRKEVTMDCKTPSNPTGMERRYGIPQGEALDIYQIIELTKGSL 1218
>gi|395747109|ref|XP_002825850.2| PREDICTED: LOW QUALITY PROTEIN: DNA polymerase subunit gamma-1 [Pongo
abelii]
Length = 1316
Score = 721 bits (1862), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/950 (42%), Positives = 541/950 (56%), Gaps = 126/950 (13%)
Query: 6 WTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLATFEV 65
W ++SS+N+L+EV++LY G L+K R +FV+G+++DI N+ +LM YCA+D AT
Sbjct: 424 WLDISSVNNLAEVHRLYVGGPPLEKEPRELFVKGTMKDIRENFQDLMQYCAQDVWATH-- 481
Query: 66 IQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLAGML 125
EV Q PLFLER PHPVTLAGML
Sbjct: 482 ------------------------------------EVFQQQLPLFLERCPHPVTLAGML 505
Query: 126 ELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDKYKDSLWLWDQ 185
E+ +YLPVN NW +Y +E+ T+ +L EMK LMD + AC LL ++YK+ WLWD
Sbjct: 506 EMGVSYLPVNQNWERYLSEAQGTYEELQREMKKSLMDLANDACQLLSGERYKEDPWLWDL 565
Query: 186 DWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQT-------EDEFVK--RRREL 236
+W +++ K KK ++ P E + DQ E+EF + R
Sbjct: 566 EWDLQEFKQKKAKKVKKEPATASKLPIEGAGAPGDPMDQEDLGPCSEEEEFQQDVMARAC 625
Query: 237 VEKFKPLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAW 296
++K K +T + LP +L G+P WYRKLC + + D AW
Sbjct: 626 LQKLK---ETTELLPKRPQHLPGHPGWYRKLCPR------------------LDDP--AW 662
Query: 297 IPGPSLISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTD--IKVPDAENI----- 349
PGPSL+S M++TPKL++LTW PLH+ HGWGYLVP D +P +
Sbjct: 663 TPGPSLLSLQMRVTPKLMALTWDGFPLHYSERHGWGYLVPGRRDNLANLPTGTTLESAGV 722
Query: 350 --PLEQLKQLY---------NNITKQDNCEAN----VDNAQ--------NSLRDSVETNI 386
P ++ LY + Q+ A DN+ + L E +
Sbjct: 723 VCPYRAIESLYRKHCLEQGKQQLIPQEAGLAEEFLLTDNSAIWQTVEELDYLEVEAEAKM 782
Query: 387 SFIDCSKSAKRLEVIANVLDKKKLAEASSTDTSTDDADTPREIGFIKLPHKDGEHLNVGN 446
+ + L + A K + +D D P F KLPHKDG NVG+
Sbjct: 783 ENLRAPVPGQPLALTARGGPKDTQPSYHHGNGPYNDVDIP-GCWFFKLPHKDGNSCNVGS 841
Query: 447 PLSRDFINKFSDNSLAGVDIGAK--RIIEISRMLSYWRNNHERVKKQFVVWLNKKDLPRR 504
P ++DF+ K D +L GA R +EI++M+S+WRN H+R+ Q VVWL + LPR
Sbjct: 842 PFAKDFLPKMEDGTLQAGPGGASGPRALEINKMISFWRNAHKRISSQMVVWLPRSALPRA 901
Query: 505 LVE--NIESEGRDYGVILPQLIVSGTLTRRAVEATWMTASNAVGERVGSELRAMIQAPDG 562
++ + + EG YG ILPQ++ +GT+TRRAVE TW+TASNA +RVGSEL+AM+QAP G
Sbjct: 902 VIRHPDYDEEGL-YGAILPQVVTAGTITRRAVEPTWLTASNARPDRVGSELKAMVQAPPG 960
Query: 563 YSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMHSITAKAVGISR 622
Y+++GADVDSQELWIA+V+GD++ A HG T GWMTL G+KS TD+HS TA VGISR
Sbjct: 961 YTLVGADVDSQELWIAAVLGDAHFAGMHGCTAFGWMTLQGRKSRGTDLHSKTATTVGISR 1020
Query: 623 EHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKGKKLYRLKDGHLE 682
EHAKI NY RIYGAG+ FAERLL QFN +++ +A KA++MY TKG + YRL D E
Sbjct: 1021 EHAKIFNYGRIYGAGQPFAERLLMQFNHRLTQQEAAEKAQQMYAATKGLRWYRLSD-EGE 1079
Query: 683 ELIKRVYSKYE---------------AREVCSAYNTSVDKIFDKPQWYGGTESAMFNRLE 727
L++ ++ + RE ++ + W GGTES MFN+LE
Sbjct: 1080 WLVRELHLPVDRTEGGWISLQDLRKVQRETARKSQWRKWEVIAERAWKGGTESEMFNKLE 1139
Query: 728 EIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLVCMRWLVS 787
IATS P TP L CR+SRALEP S +F+ +R+NWVVQS AVD+LHLMLV M+WL
Sbjct: 1140 SIATSDIPRTPVLGCRISRALEP-SAVREEFMTSRVNWVVQSSAVDYLHLMLVAMKWLFE 1198
Query: 788 R---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIPLSISFFS 844
D RF ISIHDE+RYLV +E++Y ALAL +TNLLTR KL + D+P S++FFS
Sbjct: 1199 EFAIDGRFCISIHDEVRYLVREEDRYRAALALQITNLLTRCMFAYKLGLNDLPQSVAFFS 1258
Query: 845 GVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKANGVI 894
V+ID+ LRKE DCKTPSNP G+ + YGIP GE LDIYQ I+ G +
Sbjct: 1259 AVDIDRCLRKEVTMDCKTPSNPTGMERRYGIPQGEALDIYQIIELTKGSL 1308
>gi|395831242|ref|XP_003788714.1| PREDICTED: LOW QUALITY PROTEIN: DNA polymerase subunit gamma-1
[Otolemur garnettii]
Length = 1225
Score = 721 bits (1862), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/961 (42%), Positives = 545/961 (56%), Gaps = 147/961 (15%)
Query: 6 WTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLATFEV 65
W ++SS+NSL+EV+ LY G L+K R +FV+GS++DI N+ +LM YCA+D AT
Sbjct: 332 WLDISSVNSLAEVHNLYVGGPSLEKEPREMFVKGSMKDIRENFQDLMQYCAQDVWATH-- 389
Query: 66 IQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLAGML 125
EV Q PLFLER PHPVTLAGML
Sbjct: 390 ------------------------------------EVFQQQLPLFLERCPHPVTLAGML 413
Query: 126 ELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDKYKDSLWLWDQ 185
E+ +YLPVN NW +Y E+ T+ +L EMK LMD + AC LL ++YK+ WLWD
Sbjct: 414 EMGVSYLPVNQNWERYLAEAQNTYQELQREMKKSLMDLANDACQLLSGERYKEDPWLWDL 473
Query: 186 DWSVKD-------------------LKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTE 226
+W +++ L L+ +DQE P +E
Sbjct: 474 EWDLQEFKQKKIKKVKKKELTTASKLPLEGVGAPGGPIDQEDPGPP------------SE 521
Query: 227 DEFVKRRRELVEKFKPLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIH 286
+E ++ + L T + LP +L G+P WYRKLC +
Sbjct: 522 EEEFQQDVMAHTSLQKLKGTIELLPKRPHHLPGHPGWYRKLCPR---------------- 565
Query: 287 DGISDTSEAWIPGPSLISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTD--IKVP 344
+ D AW PGPSL+S M++TPKL++LTW PLH+ HGWGYLVP D ++P
Sbjct: 566 --LDDP--AWTPGPSLLSLQMRVTPKLMALTWDGFPLHYSERHGWGYLVPGRRDNLAEMP 621
Query: 345 DAENI-------PLEQLKQLYN-NITKQDNCEANVDNA----------QNSLRDSVETNI 386
+ + P ++ LY + +Q + A +++ +VE +
Sbjct: 622 TSTTLESAGVACPYRAIESLYRKHCLEQGKQQLESQEAGLAEEFLLTDSSAMWQTVE-EL 680
Query: 387 SFIDCSKSAKRLEVIANVL--DKKKLAEASSTDTST----------DDADTPREIGFIKL 434
+++ AK +E + VL + L A S S +D D P F KL
Sbjct: 681 GYLEVEPEAK-MENMRAVLAGQSQALTAAGSPKASQPTYHHGNGPYNDVDIP-GCWFFKL 738
Query: 435 PHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAK--RIIEISRMLSYWRNNHERVKKQF 492
PHKDG NVG+P ++DF+ K D +L GA R +EI++M+S+WRN H+R+ Q
Sbjct: 739 PHKDGNSCNVGSPFAKDFLPKMEDGTLQAGPGGASGPRALEINKMISFWRNAHKRISSQM 798
Query: 493 VVWLNKKDLPRRLVENIE--SEGRDYGVILPQLIVSGTLTRRAVEATWMTASNAVGERVG 550
VVWL + LPR + + + EGR YG ILPQ++ +GT+TRRAVE TW+TASNA +RVG
Sbjct: 799 VVWLPRSALPRTVTRHPDYNEEGR-YGAILPQVVTAGTITRRAVEPTWLTASNARPDRVG 857
Query: 551 SELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDM 610
SEL+AM+QAP GY ++GADVDSQELWIA+V+GD++ A HG T GWMTL G+KS TD+
Sbjct: 858 SELKAMVQAPPGYVLVGADVDSQELWIAAVLGDAHFAGMHGCTAFGWMTLQGRKSRGTDL 917
Query: 611 HSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKG 670
HS TA VGISREHAKI NY RIYGAG+ FAERLL QFN +++ +A KA++MY +TKG
Sbjct: 918 HSKTATTVGISREHAKIFNYGRIYGAGQPFAERLLMQFNHRLTRQEAAEKAQQMYAVTKG 977
Query: 671 KKLYRLKD------GHLEELIKRVYSKYEA--------REVCSAYNTSVDKIFDKPQWYG 716
+ YRL D L+ + R + + RE ++ + W G
Sbjct: 978 IRRYRLSDEGEWLVRELDLPVDRTEDGWVSLQDLRKIQREASRKSRWKKWEVVAERAWIG 1037
Query: 717 GTESAMFNRLEEIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLH 776
GTES MFN+LE IATS +P TP L CR+SRALEP S +F+ +R+NWVVQS AVD+LH
Sbjct: 1038 GTESEMFNKLESIATSDKPCTPVLGCRISRALEP-SAVQGEFMTSRVNWVVQSSAVDYLH 1096
Query: 777 LMLVCMRWLVSR---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDM 833
LMLV M+WL D RF ISIHDE+RYLV +E++Y ALAL +TNLLTR KL +
Sbjct: 1097 LMLVAMKWLFEEFAIDGRFCISIHDEVRYLVREEDRYRAALALQITNLLTRCMFAYKLGL 1156
Query: 834 TDIPLSISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKANGV 893
D+P S++FFS V+ID+ LRKE DCKTPSNP G+ + YGIP GE LDIYQ I+ G
Sbjct: 1157 NDLPQSVAFFSAVDIDQCLRKEVTMDCKTPSNPTGMERRYGIPQGEALDIYQIIELTKGS 1216
Query: 894 I 894
+
Sbjct: 1217 L 1217
>gi|395502462|ref|XP_003755599.1| PREDICTED: DNA polymerase subunit gamma-1 [Sarcophilus harrisii]
Length = 1142
Score = 721 bits (1862), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 398/932 (42%), Positives = 552/932 (59%), Gaps = 106/932 (11%)
Query: 6 WTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLATFEV 65
W ++SS+N+L++V+ LY G L+K R +FV+G+++DI N+ +LM YCA D AT
Sbjct: 270 WLDISSINNLADVHSLYVGGPPLEKEARELFVKGTMKDIRENFQDLMQYCALDVQAT--- 326
Query: 66 IQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLAGML 125
+EV Q PLF+ER PHPVTLAGML
Sbjct: 327 -----------------------------------YEVFQEQLPLFMERCPHPVTLAGML 351
Query: 126 ELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDKYKDSLWLWDQ 185
E+ +YLPVN NW +Y E+ T+ +L EMK LMD + AC L+ +D+YKD+ WLWD
Sbjct: 352 EMGVSYLPVNQNWDRYLMEAQTTYEELQREMKKSLMDLANDACQLVSEDRYKDNPWLWDL 411
Query: 186 DWSVKDLKLKKKA----NKTLSVDQETEEPEEFY-EINKNGEDQTEDEFVKRRRELVEKF 240
+W +++ K+KKK ++ +S +E ++ ++ +E+E ++ + +
Sbjct: 412 EWDLQEFKMKKKKIRKKDQNISCKSSSEVENSSERKVQEDPGPPSEEEELQNDSAIRTRM 471
Query: 241 KPLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIPGP 300
+ L +T LP + +L G+P WYRKLC + ++D AW+PGP
Sbjct: 472 EELKETLSLLPKRTQHLPGHPGWYRKLCPR------------------LNDP--AWVPGP 511
Query: 301 SLISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTDIKV-----PDAENIPLEQLK 355
SLIS M++TPKL+ LTW P+H+ HGWGYLVP D + DA P ++
Sbjct: 512 SLISLQMRVTPKLMMLTWDGFPVHYSEKHGWGYLVPGRQDNLLVGSSKTDAVGCPYRAIE 571
Query: 356 QLYNNITKQDNCEANVDNAQNSLRDSVETNISFIDCSKSAKRLEVIANVLDKKKLAEASS 415
LY ++ E V Q + + T+ + + LE A+ + + E ++
Sbjct: 572 ALYQKSCRERGKEQPVLKGQPLPEEFLLTDSTVWQTIEELSHLEPDADFENGRATQEETN 631
Query: 416 T-----------DTSTDDADTPREIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGV 464
+ +D + P F KLPHKDG + NVG+P ++DF+ K D +L
Sbjct: 632 GSQLSQPTFHHGNGPYNDVNIP-GCWFFKLPHKDGNNCNVGSPFAKDFLPKMEDGTLQAG 690
Query: 465 DIGAK--RIIEISRMLSYWRNNHERVKKQFVVWLNKKDLPRRLVENIE-SEGRDYGVILP 521
GA R +EI++M+S+WRN H+R+ Q VVWL K DLPR ++ + + E YG ILP
Sbjct: 691 PGGASGPRALEINKMVSFWRNAHKRISSQMVVWLQKGDLPRTVIRHSDYDEENCYGAILP 750
Query: 522 QLIVSGTLTRRAVEATWMTASNAVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVI 581
Q++ +GT+TRRAVE TW+TASNA +RVGSEL+AM+QAP GY ++GADVDSQELWIA+V+
Sbjct: 751 QVVTAGTITRRAVEPTWLTASNARVDRVGSELKAMVQAPPGYVLVGADVDSQELWIAAVL 810
Query: 582 GDSYCAKEHGATPLGWMTLSGQKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFA 641
GD++ A HG T GWMTL G+KS+ TD+HS TA VGISREHAK+ NY RIYGAG+ FA
Sbjct: 811 GDAHFAGIHGCTAFGWMTLQGKKSSGTDLHSKTASTVGISREHAKVFNYGRIYGAGQPFA 870
Query: 642 ERLLKQFNPEMSKSDAKSKARKMYTLTKGKKLYRL-KDGHLEELIKRV------------ 688
ERLL QFN ++ AK KA++MY +TKG + Y+L KDG E L+K++
Sbjct: 871 ERLLMQFNHRLTPQQAKEKAQQMYAVTKGLRQYQLSKDG--EWLVKKLGIQLDRTDGWVS 928
Query: 689 ---YSKYEAREVCSAYNTSVDKIFDKPQWYGGTESAMFNRLEEIATSLQPVTPFLNCRLS 745
K + ++ D + D+ W GGTES MFN+LE IA S P TP L+C++S
Sbjct: 929 LQDLRKIQKEAFKMSHRKKWDLVADR-AWAGGTESEMFNKLESIAMSDAPRTPVLDCQIS 987
Query: 746 RALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLVCMRWLVSR---DTRFVISIHDEIRY 802
RALEP +F+ +R+NWVVQS AVD+LHLMLV M+WL RF ISIHDE+RY
Sbjct: 988 RALEPAVV-RGEFVTSRVNWVVQSSAVDYLHLMLVAMKWLFEEFDISGRFCISIHDEVRY 1046
Query: 803 LVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIPLSISFFSGVEIDKVLRKESDNDCKT 862
LV ++++Y ALAL +TNLLTR KL + D+P S++FFS V+ID+ LRKE DCKT
Sbjct: 1047 LVQEKDRYRAALALQITNLLTRCMFAYKLGLNDLPQSVAFFSAVDIDQCLRKEVTMDCKT 1106
Query: 863 PSNPYGLCKGYGIPLGEILDIYQTIDKANGVI 894
PSNP GL + YGIP GE LDIYQ I G +
Sbjct: 1107 PSNPTGLERKYGIPSGEALDIYQIIKLTKGSL 1138
>gi|417406156|gb|JAA49752.1| Putative mitochondrial dna polymerase gamma catalytic subunit
[Desmodus rotundus]
Length = 1218
Score = 721 bits (1862), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/945 (42%), Positives = 527/945 (55%), Gaps = 118/945 (12%)
Query: 6 WTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLATFEV 65
W ++SS+N+L++V+ LY G L K R +FV+GS+ DI N+ +LM YCA+D AT
Sbjct: 328 WLDISSVNNLADVHSLYVGGPPLRKEPRELFVKGSMRDIRENFQDLMQYCAQDVWAT--- 384
Query: 66 IQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLAGML 125
+EV Q PLFLER PHPVTLAGML
Sbjct: 385 -----------------------------------YEVFQQQLPLFLERCPHPVTLAGML 409
Query: 126 ELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDKYKDSLWLWDQ 185
E+ +YLPVN NW +Y E+ T+ +L EMK LMD + AC LL ++YK+ WLWD
Sbjct: 410 EMGVSYLPVNQNWERYLAEAQSTYEELQWEMKKSLMDLANDACQLLSGERYKEDPWLWDL 469
Query: 186 DWSVKDLKLKKKANKTLSVDQETEE-PEEFYEINKNGEDQ------TEDEFVKRRRELVE 238
+W +++ K KK + T P E E EDQ +E+E +R
Sbjct: 470 EWDLQEFKQKKAKKVKRKEPEATSPLPVEAAEAPGAPEDQEDPGPPSEEEESQRAVATRT 529
Query: 239 KFKPLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIP 298
+ L T LP +L G+P WYRKLC + + D AW P
Sbjct: 530 CLEQLKGTTALLPKRPQHLPGHPGWYRKLCPR------------------LDDP--AWAP 569
Query: 299 GPSLISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTD---------IKVPDAENI 349
GPSL+S M++TPKL++LTW PLHF HGWGYLVP D P
Sbjct: 570 GPSLLSLQMRVTPKLMALTWDGFPLHFSERHGWGYLVPGRRDNLAHVPASTSPAPTGVTC 629
Query: 350 PLEQLKQLYN-NITKQDNCEANVDNAQ-----------------NSLRDSVETNISFIDC 391
P ++ LY+ + +Q + A L E + +
Sbjct: 630 PYRAIESLYSKHCLEQGKRQPEPQEAGLAEDFLLAEEWQMVEELGCLEVQAEAEVEPAEG 689
Query: 392 SKSAKRLEVIANVLDKKKLAEASSTDTSTDDADTPREIGFIKLPHKDGEHLNVGNPLSRD 451
+ +A+ + + D D P F KLPHKDG NVG+P ++D
Sbjct: 690 AVAAQPPAPTGTGRPRGSQPAYHHGNGPYHDVDIP-GCWFFKLPHKDGNSCNVGSPFAKD 748
Query: 452 FINKFSDNSLAGVDIGAK--RIIEISRMLSYWRNNHERVKKQFVVWLNKKDLPRRLVE-- 507
F+ K D +L GA R +EI++M+S+WRN H+R+ Q VVWL + LPR +
Sbjct: 749 FLPKMEDGTLQAGPGGASGPRALEINKMISFWRNAHKRISSQMVVWLPRSALPRVVTRHP 808
Query: 508 NIESEGRDYGVILPQLIVSGTLTRRAVEATWMTASNAVGERVGSELRAMIQAPDGYSIIG 567
+ + EGR YG ILPQ++ +GT+TRRAVE TW+TASNA +RVGSEL+AM+QAP GY ++G
Sbjct: 809 DYDEEGR-YGAILPQVVTAGTITRRAVEPTWLTASNARPDRVGSELKAMVQAPPGYVLVG 867
Query: 568 ADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMHSITAKAVGISREHAKI 627
ADVDSQELWIA+V+GD++ A HG T GWMTL G+KS TD+HS TA VGISREHAKI
Sbjct: 868 ADVDSQELWIAAVLGDAHFAGMHGCTAFGWMTLQGRKSRGTDLHSKTATTVGISREHAKI 927
Query: 628 INYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKGKKLYRLKDGHLEELIKR 687
NY RIYGAG+ FAERLL QFN ++ +A KA++MY TKG + YRL D E L+++
Sbjct: 928 FNYGRIYGAGQPFAERLLMQFNHRLTLQEAAEKAQQMYAFTKGLRRYRLSD-EGEWLVRQ 986
Query: 688 VYSKYE---------------AREVCSAYNTSVDKIFDKPQWYGGTESAMFNRLEEIATS 732
++ E RE K+ + W GGTES MFN+LE IA S
Sbjct: 987 LHIPVERTEDGFVSLRDLRKIQREASRKSRRKNWKVVAERAWTGGTESEMFNKLESIAMS 1046
Query: 733 LQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLVCMRWLVSR---D 789
+P TP L CR+SRALEP S +F+ +R+NWVVQS AVD+LHLMLV M+WL D
Sbjct: 1047 DEPRTPVLGCRISRALEP-SVAQGEFMTSRVNWVVQSSAVDYLHLMLVAMKWLFEEFAID 1105
Query: 790 TRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIPLSISFFSGVEID 849
RF ISIHDE+RYLV + ++Y ALAL + NLLTR KL + D+P S++FFS V+ID
Sbjct: 1106 GRFCISIHDEVRYLVQEGDRYRAALALQIANLLTRCMFAYKLGLNDLPQSVAFFSAVDID 1165
Query: 850 KVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKANGVI 894
+ LRKE DC+TPSNP G+ + YGIP GE LDIYQ I+ G +
Sbjct: 1166 RCLRKEVTMDCETPSNPTGMERRYGIPQGEALDIYQIIELTKGSL 1210
>gi|410960566|ref|XP_003986860.1| PREDICTED: LOW QUALITY PROTEIN: DNA polymerase subunit gamma-1 [Felis
catus]
Length = 1226
Score = 721 bits (1860), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/947 (42%), Positives = 536/947 (56%), Gaps = 119/947 (12%)
Query: 6 WTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLATFEV 65
W ++SS+N+L++V+ LY G L+K R +FV+GS++D+ N+ +LM YCA+D AT
Sbjct: 333 WLDISSVNNLADVHSLYVGGPPLEKEPRELFVKGSMKDVRENFQDLMQYCAQDVWAT--- 389
Query: 66 IQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLAGML 125
+EV Q PLFLER PHPVTLAGML
Sbjct: 390 -----------------------------------YEVFQQQLPLFLERCPHPVTLAGML 414
Query: 126 ELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDKYKDSLWLWDQ 185
E+ +YLPVN NW +Y E+ T+ +L EMK LMD D AC LL ++YKD WLWD
Sbjct: 415 EMGVSYLPVNQNWERYLAEAQSTYEELQREMKKSLMDLADDACQLLSGERYKDDPWLWDL 474
Query: 186 DWSVKDLKLKKKANKTLSVDQETEE-PEEFYEINKNGEDQ------TEDEFVKRRRELVE 238
+W +++ K KK + P E + +DQ +E+E +R
Sbjct: 475 EWGLQEFKQKKVKQVKRKEPVAASQLPTEGAGAPGDPKDQEDPGPPSEEEEARRDVTARA 534
Query: 239 KFKPLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIP 298
+ L T + LP +L G+P WYRKLC + + D AW P
Sbjct: 535 CLEHLKGTAEILPKRPQHLPGHPGWYRKLCPR------------------LDDP--AWTP 574
Query: 299 GPSLISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTD---------IKVPDAENI 349
GPSL+S M++TPKL+++TW PLHF HGWGYLVP D
Sbjct: 575 GPSLLSLQMRVTPKLMAMTWDGFPLHFSERHGWGYLVPGRRDNLAKAPAEAALASAGVAC 634
Query: 350 PLEQLKQLYNNIT----KQDNCEANVDNAQNSL---RDSVETNISFIDC---SKSAKRLE 399
P ++ LY KQ A+ L +V + + C A+
Sbjct: 635 PYRAIESLYRKHCLEQGKQQPEPQEAGLAEEFLLADDSAVWQTVEELGCLEAEAEAREER 694
Query: 400 VIANVLDKKKLAEASSTDTST-----------DDADTPREIGFIKLPHKDGEHLNVGNPL 448
A V D+ A+ ++ +D D P F KLPHKDG NVG+P
Sbjct: 695 CGAAVPDQPLAPTAAGGPRASQPAYHHGNGPYNDVDVP-GCWFFKLPHKDGSSFNVGSPF 753
Query: 449 SRDFINKFSDNSLAGVDIGAK--RIIEISRMLSYWRNNHERVKKQFVVWLNKKDLPRRLV 506
++DF+ K D +L GA R +EI++M+S+WRN H+R+ Q VVWL + LPR +
Sbjct: 754 AKDFLPKMEDGTLQAGPGGASGPRALEINKMISFWRNAHKRISSQMVVWLPRSALPRAVT 813
Query: 507 EN--IESEGRDYGVILPQLIVSGTLTRRAVEATWMTASNAVGERVGSELRAMIQAPDGYS 564
+ + EGR YG ILPQ++ +GT+TRRAVE TW+TASNA +RVGSEL+AM+QAP GY
Sbjct: 814 RHPRYDEEGR-YGAILPQVVTAGTITRRAVEPTWLTASNARPDRVGSELKAMVQAPPGYV 872
Query: 565 IIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMHSITAKAVGISREH 624
++GADVDSQELWIA+V+GD++ A HG T GWMTL G+KS TD+HS TA VGISREH
Sbjct: 873 LVGADVDSQELWIAAVLGDAHFAGMHGCTAFGWMTLQGRKSRGTDLHSKTASTVGISREH 932
Query: 625 AKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKGKKLYRLKD------ 678
AKI NY RIYGAG+ FAERLL QFN +++ +A KA++MY +TKG + YRL D
Sbjct: 933 AKIFNYGRIYGAGQPFAERLLMQFNHRLTRQEAAEKAQQMYAVTKGLRRYRLSDEGEWLV 992
Query: 679 GHLEELIKRVYSKYEA--------REVCSAYNTSVDKIFDKPQWYGGTESAMFNRLEEIA 730
L+ + R + + RE + ++ + W GGTES MFN+LE IA
Sbjct: 993 RELDLPVDRTEDGWVSLQDLRKIQREASRKSHWKKWEVVAERAWMGGTESEMFNKLESIA 1052
Query: 731 TSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLVCMRWLVSR-- 788
TS P TP L CR+SRALEP S +F+ +R+NWVVQS AVD+LHLMLV M+WL
Sbjct: 1053 TSDTPRTPVLGCRISRALEP-SAVQGEFMTSRVNWVVQSSAVDYLHLMLVAMKWLFEEFA 1111
Query: 789 -DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIPLSISFFSGVE 847
D RF ISIHDE+RYLV +E++Y ALAL +TNLLTR KL + D+P S++FFS V+
Sbjct: 1112 IDGRFCISIHDEVRYLVREEDRYRAALALQITNLLTRCMFAHKLGLDDLPQSVAFFSTVD 1171
Query: 848 IDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKANGVI 894
ID+ LRKE DCKTPSNP G+ + YGIP GE LDIYQ I+ G +
Sbjct: 1172 IDQCLRKEVTMDCKTPSNPTGMERRYGIPQGEALDIYQIIELTKGSL 1218
>gi|410266800|gb|JAA21366.1| polymerase (DNA directed), gamma [Pan troglodytes]
gi|410266804|gb|JAA21368.1| polymerase (DNA directed), gamma [Pan troglodytes]
Length = 1236
Score = 720 bits (1859), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/950 (42%), Positives = 539/950 (56%), Gaps = 126/950 (13%)
Query: 6 WTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLATFEV 65
W ++SS+NSL+EV++LY G L+K R +FV+G+++DI N+ +LM YCA+D AT
Sbjct: 344 WLDISSVNSLAEVHRLYVGGPPLEKEPRELFVKGTMKDIRENFQDLMQYCAQDVWATH-- 401
Query: 66 IQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLAGML 125
EV Q PLFLER PHPVTLAGML
Sbjct: 402 ------------------------------------EVFQQQLPLFLERCPHPVTLAGML 425
Query: 126 ELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDKYKDSLWLWDQ 185
E+ +YLPVN NW +Y E+ T+ +L EMK LMD + AC LL ++YKD WLWD
Sbjct: 426 EMGVSYLPVNQNWERYLAEAQGTYEELQREMKKSLMDLANDACQLLSGERYKDDPWLWDL 485
Query: 186 DWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQT-------EDEFVK--RRREL 236
+W +++ K KK ++ P E + DQ E+EF + R
Sbjct: 486 EWDLQEFKQKKARKVKKEPATASKLPIEGAGAPGDPMDQEDLGPCSEEEEFQQDVMARAC 545
Query: 237 VEKFKPLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAW 296
++K K T + LP +L G+P WYRKLC + + D AW
Sbjct: 546 LQKLK---GTTELLPKRPQHLPGHPGWYRKLCPR------------------LDDP--AW 582
Query: 297 IPGPSLISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTD--IKVPDAENI----- 349
PGPSL+S M++TPKL++LTW PLH+ HGWGYLVP D K+P +
Sbjct: 583 TPGPSLLSLQMRVTPKLMALTWDGFPLHYSERHGWGYLVPGRRDNLAKLPTGTTLESAGV 642
Query: 350 --PLEQLKQLY---------NNITKQDNCEAN----VDNAQ--------NSLRDSVETNI 386
P ++ LY + Q+ A DN+ + L E +
Sbjct: 643 VCPYRAIESLYRKHCLEQGKQQLMPQEAGLAEEFLLTDNSAIWQTVEELDYLEVEAEAKM 702
Query: 387 SFIDCSKSAKRLEVIANVLDKKKLAEASSTDTSTDDADTPREIGFIKLPHKDGEHLNVGN 446
+ + + L + A K + +D D P F KLPHKDG NVG+
Sbjct: 703 ENLRAAVPGQPLALTARGGPKDTQPSYHHGNGPYNDVDIP-GCWFFKLPHKDGNSCNVGS 761
Query: 447 PLSRDFINKFSDNSLAGVDIGAK--RIIEISRMLSYWRNNHERVKKQFVVWLNKKDLPRR 504
P ++DF+ K D +L GA R +EI++M+S+WRN H+R+ Q VVWL + LPR
Sbjct: 762 PFAKDFLPKMEDGTLQAGPGGASGPRALEINKMISFWRNAHKRISSQMVVWLPRSALPRA 821
Query: 505 LVE--NIESEGRDYGVILPQLIVSGTLTRRAVEATWMTASNAVGERVGSELRAMIQAPDG 562
++ + + EG YG ILPQ++ +GT+TRRAVE TW+TASNA +RVGSEL+AM+QAP G
Sbjct: 822 VIRHPDYDEEGL-YGAILPQVVTAGTITRRAVEPTWLTASNARPDRVGSELKAMVQAPPG 880
Query: 563 YSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMHSITAKAVGISR 622
Y+++GADVDSQELWIA+V+GD++ A HG T GWMTL G+KS TD+HS TA VGISR
Sbjct: 881 YTLVGADVDSQELWIAAVLGDAHFAGMHGCTAFGWMTLQGRKSRGTDLHSKTATTVGISR 940
Query: 623 EHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKGKKLYRLKDGHLE 682
EHAKI NY RIYGAG+ FAERLL QFN +++ +A KA++MY TKG + YRL D E
Sbjct: 941 EHAKIFNYGRIYGAGQPFAERLLMQFNHRLTQQEAAEKAQQMYAATKGLRWYRLSD-EGE 999
Query: 683 ELIKRVYSKYE---------------AREVCSAYNTSVDKIFDKPQWYGGTESAMFNRLE 727
L++ + + RE ++ + W GGTES MFN+LE
Sbjct: 1000 WLVRELNLPVDRTEGGWISLQDLRKVQRETARKSQWKKWEVVAERAWKGGTESEMFNKLE 1059
Query: 728 EIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLVCMRWLVS 787
IATS P TP L C +SRALEP S +F+ +R+NWVVQS AVD+LHLMLV M+WL
Sbjct: 1060 SIATSDIPRTPVLGCCISRALEP-SAVQEEFMTSRVNWVVQSSAVDYLHLMLVAMKWLFE 1118
Query: 788 R---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIPLSISFFS 844
D RF ISIHDE+RYLV +E++Y ALAL +TNLLTR KL + D+P S++FFS
Sbjct: 1119 EFAIDGRFCISIHDEVRYLVREEDRYRAALALQITNLLTRCMFAYKLGLNDLPQSVAFFS 1178
Query: 845 GVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKANGVI 894
V+ID+ LRKE DCKTPSNP G+ + YGIP GE LDIYQ I+ G +
Sbjct: 1179 AVDIDRCLRKEVTMDCKTPSNPTGMERRYGIPQGEALDIYQIIELTKGSL 1228
>gi|410221288|gb|JAA07863.1| polymerase (DNA directed), gamma [Pan troglodytes]
gi|410221292|gb|JAA07865.1| polymerase (DNA directed), gamma [Pan troglodytes]
gi|410306766|gb|JAA31983.1| polymerase (DNA directed), gamma [Pan troglodytes]
Length = 1237
Score = 720 bits (1859), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/950 (42%), Positives = 539/950 (56%), Gaps = 126/950 (13%)
Query: 6 WTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLATFEV 65
W ++SS+NSL+EV++LY G L+K R +FV+G+++DI N+ +LM YCA+D AT
Sbjct: 345 WLDISSVNSLAEVHRLYVGGPPLEKEPRELFVKGTMKDIRENFQDLMQYCAQDVWATH-- 402
Query: 66 IQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLAGML 125
EV Q PLFLER PHPVTLAGML
Sbjct: 403 ------------------------------------EVFQQQLPLFLERCPHPVTLAGML 426
Query: 126 ELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDKYKDSLWLWDQ 185
E+ +YLPVN NW +Y E+ T+ +L EMK LMD + AC LL ++YKD WLWD
Sbjct: 427 EMGVSYLPVNQNWERYLAEAQGTYEELQREMKKSLMDLANDACQLLSGERYKDDPWLWDL 486
Query: 186 DWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQT-------EDEFVK--RRREL 236
+W +++ K KK ++ P E + DQ E+EF + R
Sbjct: 487 EWDLQEFKQKKARKVKKEPATASKLPIEGAGAPGDPMDQEDLGPCSEEEEFQQDVMARAC 546
Query: 237 VEKFKPLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAW 296
++K K T + LP +L G+P WYRKLC + + D AW
Sbjct: 547 LQKLK---GTTELLPKRPQHLPGHPGWYRKLCPR------------------LDDP--AW 583
Query: 297 IPGPSLISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTD--IKVPDAENI----- 349
PGPSL+S M++TPKL++LTW PLH+ HGWGYLVP D K+P +
Sbjct: 584 TPGPSLLSLQMRVTPKLMALTWDGFPLHYSERHGWGYLVPGRRDNLAKLPTGTTLESAGV 643
Query: 350 --PLEQLKQLY---------NNITKQDNCEAN----VDNAQ--------NSLRDSVETNI 386
P ++ LY + Q+ A DN+ + L E +
Sbjct: 644 VCPYRAIESLYRKHCLEQGKQQLMPQEAGLAEEFLLTDNSAIWQTVEELDYLEVEAEAKM 703
Query: 387 SFIDCSKSAKRLEVIANVLDKKKLAEASSTDTSTDDADTPREIGFIKLPHKDGEHLNVGN 446
+ + + L + A K + +D D P F KLPHKDG NVG+
Sbjct: 704 ENLRAAVPGQPLALTARGGPKDTQPSYHHGNGPYNDVDIP-GCWFFKLPHKDGNSCNVGS 762
Query: 447 PLSRDFINKFSDNSLAGVDIGAK--RIIEISRMLSYWRNNHERVKKQFVVWLNKKDLPRR 504
P ++DF+ K D +L GA R +EI++M+S+WRN H+R+ Q VVWL + LPR
Sbjct: 763 PFAKDFLPKMEDGTLQAGPGGASGPRALEINKMISFWRNAHKRISSQMVVWLPRSALPRA 822
Query: 505 LVE--NIESEGRDYGVILPQLIVSGTLTRRAVEATWMTASNAVGERVGSELRAMIQAPDG 562
++ + + EG YG ILPQ++ +GT+TRRAVE TW+TASNA +RVGSEL+AM+QAP G
Sbjct: 823 VIRHPDYDEEGL-YGAILPQVVTAGTITRRAVEPTWLTASNARPDRVGSELKAMVQAPPG 881
Query: 563 YSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMHSITAKAVGISR 622
Y+++GADVDSQELWIA+V+GD++ A HG T GWMTL G+KS TD+HS TA VGISR
Sbjct: 882 YTLVGADVDSQELWIAAVLGDAHFAGMHGCTAFGWMTLQGRKSRGTDLHSKTATTVGISR 941
Query: 623 EHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKGKKLYRLKDGHLE 682
EHAKI NY RIYGAG+ FAERLL QFN +++ +A KA++MY TKG + YRL D E
Sbjct: 942 EHAKIFNYGRIYGAGQPFAERLLMQFNHRLTQQEAAEKAQQMYAATKGLRWYRLSD-EGE 1000
Query: 683 ELIKRVYSKYE---------------AREVCSAYNTSVDKIFDKPQWYGGTESAMFNRLE 727
L++ + + RE ++ + W GGTES MFN+LE
Sbjct: 1001 WLVRELNLPVDRTEGGWISLQDLRKVQRETARKSQWKKWEVVAERAWKGGTESEMFNKLE 1060
Query: 728 EIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLVCMRWLVS 787
IATS P TP L C +SRALEP S +F+ +R+NWVVQS AVD+LHLMLV M+WL
Sbjct: 1061 SIATSDIPRTPVLGCCISRALEP-SAVQEEFMTSRVNWVVQSSAVDYLHLMLVAMKWLFE 1119
Query: 788 R---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIPLSISFFS 844
D RF ISIHDE+RYLV +E++Y ALAL +TNLLTR KL + D+P S++FFS
Sbjct: 1120 EFAIDGRFCISIHDEVRYLVREEDRYRAALALQITNLLTRCMFAYKLGLNDLPQSVAFFS 1179
Query: 845 GVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKANGVI 894
V+ID+ LRKE DCKTPSNP G+ + YGIP GE LDIYQ I+ G +
Sbjct: 1180 AVDIDRCLRKEVTMDCKTPSNPTGMERRYGIPQGEALDIYQIIELTKGSL 1229
>gi|114658821|ref|XP_523149.2| PREDICTED: DNA polymerase subunit gamma-1 [Pan troglodytes]
Length = 1236
Score = 720 bits (1859), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/950 (42%), Positives = 539/950 (56%), Gaps = 126/950 (13%)
Query: 6 WTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLATFEV 65
W ++SS+NSL+EV++LY G L+K R +FV+G+++DI N+ +LM YCA+D AT
Sbjct: 344 WLDISSVNSLAEVHRLYVGGPPLEKEPRELFVKGTMKDIRENFQDLMQYCAQDVWATH-- 401
Query: 66 IQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLAGML 125
EV Q PLFLER PHPVTLAGML
Sbjct: 402 ------------------------------------EVFQQQLPLFLERCPHPVTLAGML 425
Query: 126 ELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDKYKDSLWLWDQ 185
E+ +YLPVN NW +Y E+ T+ +L EMK LMD + AC LL ++YKD WLWD
Sbjct: 426 EMGVSYLPVNQNWERYLAEAQGTYEELQREMKKSLMDLANDACQLLSGERYKDDPWLWDL 485
Query: 186 DWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQT-------EDEFVK--RRREL 236
+W +++ K KK ++ P E + DQ E+EF + R
Sbjct: 486 EWDLQEFKQKKARKVKKEPATASKLPIEGAGAPGDPMDQEDLGPCSEEEEFQQDVMARAC 545
Query: 237 VEKFKPLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAW 296
++K K T + LP +L G+P WYRKLC + + D AW
Sbjct: 546 LQKLK---GTTELLPKRPQHLPGHPGWYRKLCPR------------------LDDP--AW 582
Query: 297 IPGPSLISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTD--IKVPDAENI----- 349
PGPSL+S M++TPKL++LTW PLH+ HGWGYLVP D K+P +
Sbjct: 583 TPGPSLLSLQMRVTPKLMALTWDGFPLHYSERHGWGYLVPGRRDNLAKLPTGTTLESAGV 642
Query: 350 --PLEQLKQLY---------NNITKQDNCEAN----VDNAQ--------NSLRDSVETNI 386
P ++ LY + Q+ A DN+ + L E +
Sbjct: 643 VCPYRAIESLYRKHCLEQGKQQLMPQEAGLAEEFLLTDNSAIWQTVEELDYLEVEAEAKM 702
Query: 387 SFIDCSKSAKRLEVIANVLDKKKLAEASSTDTSTDDADTPREIGFIKLPHKDGEHLNVGN 446
+ + + L + A K + +D D P F KLPHKDG NVG+
Sbjct: 703 ENLRAAVPGQPLALTARGGPKDTQPSYHHGNGPYNDVDIP-GCWFFKLPHKDGNSCNVGS 761
Query: 447 PLSRDFINKFSDNSLAGVDIGAK--RIIEISRMLSYWRNNHERVKKQFVVWLNKKDLPRR 504
P ++DF+ K D +L GA R +EI++M+S+WRN H+R+ Q VVWL + LPR
Sbjct: 762 PFAKDFLPKMEDGTLQAGPGGASGPRALEINKMISFWRNAHKRISSQMVVWLPRSALPRA 821
Query: 505 LVE--NIESEGRDYGVILPQLIVSGTLTRRAVEATWMTASNAVGERVGSELRAMIQAPDG 562
++ + + EG YG ILPQ++ +GT+TRRAVE TW+TASNA +RVGSEL+AM+QAP G
Sbjct: 822 VIRHPDYDEEGL-YGAILPQVVTAGTITRRAVEPTWLTASNARPDRVGSELKAMVQAPPG 880
Query: 563 YSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMHSITAKAVGISR 622
Y+++GADVDSQELWIA+V+GD++ A HG T GWMTL G+KS TD+HS TA VGISR
Sbjct: 881 YTLVGADVDSQELWIAAVLGDAHFAGMHGCTAFGWMTLQGRKSRGTDLHSKTATTVGISR 940
Query: 623 EHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKGKKLYRLKDGHLE 682
EHAKI NY RIYGAG+ FAERLL QFN +++ +A KA++MY TKG + YRL D E
Sbjct: 941 EHAKIFNYGRIYGAGQPFAERLLMQFNHRLTQQEAAEKAQQMYAATKGLRWYRLSD-EGE 999
Query: 683 ELIKRVYSKYE---------------AREVCSAYNTSVDKIFDKPQWYGGTESAMFNRLE 727
L++ + + RE ++ + W GGTES MFN+LE
Sbjct: 1000 WLVRELNLPVDRTEGGWISLQDLRKVQRETARKSQWKKWEVVAERAWKGGTESEMFNKLE 1059
Query: 728 EIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLVCMRWLVS 787
IATS P TP L C +SRALEP S +F+ +R+NWVVQS AVD+LHLMLV M+WL
Sbjct: 1060 SIATSDIPRTPVLGCCISRALEP-SAVQEEFMTSRVNWVVQSSAVDYLHLMLVAMKWLFE 1118
Query: 788 R---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIPLSISFFS 844
D RF ISIHDE+RYLV +E++Y ALAL +TNLLTR KL + D+P S++FFS
Sbjct: 1119 EFAIDGRFCISIHDEVRYLVREEDRYRAALALQITNLLTRCMFAYKLGLNDLPQSVAFFS 1178
Query: 845 GVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKANGVI 894
V+ID+ LRKE DCKTPSNP G+ + YGIP GE LDIYQ I+ G +
Sbjct: 1179 AVDIDRCLRKEVTMDCKTPSNPTGMERRYGIPQGEALDIYQIIELTKGSL 1228
>gi|397499456|ref|XP_003820468.1| PREDICTED: DNA polymerase subunit gamma-1 [Pan paniscus]
Length = 1234
Score = 720 bits (1859), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/950 (42%), Positives = 539/950 (56%), Gaps = 126/950 (13%)
Query: 6 WTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLATFEV 65
W ++SS+NSL+EV++LY G L+K R +FV+G+++DI N+ +LM YCA+D AT
Sbjct: 342 WLDISSVNSLAEVHRLYVGGPPLEKEPRELFVKGTMKDIRENFQDLMQYCAQDVWATH-- 399
Query: 66 IQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLAGML 125
EV Q PLFLER PHPVTLAGML
Sbjct: 400 ------------------------------------EVFQQQLPLFLERCPHPVTLAGML 423
Query: 126 ELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDKYKDSLWLWDQ 185
E+ +YLPVN NW +Y E+ T+ +L EMK LMD + AC LL ++YKD WLWD
Sbjct: 424 EMGVSYLPVNQNWERYLAEAQGTYEELQREMKKSLMDLANDACQLLSGERYKDDPWLWDL 483
Query: 186 DWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQT-------EDEFVK--RRREL 236
+W +++ K KK ++ P E + DQ E+EF + R
Sbjct: 484 EWDLQEFKQKKAKKVKKEPATASKLPIEGAGAPGDPMDQEDLGPCSEEEEFQQDVMARAC 543
Query: 237 VEKFKPLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAW 296
++K K T + LP +L G+P WYRKLC + + D AW
Sbjct: 544 LQKLK---GTTELLPKRPQHLPGHPGWYRKLCPR------------------LDDP--AW 580
Query: 297 IPGPSLISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTD--IKVPDAENI----- 349
PGPSL+S M++TPKL++LTW PLH+ HGWGYLVP D K+P +
Sbjct: 581 TPGPSLLSLQMRVTPKLMALTWDGFPLHYSERHGWGYLVPGRRDNLAKLPTGTTLESAGV 640
Query: 350 --PLEQLKQLY---------NNITKQDNCEAN----VDNAQ--------NSLRDSVETNI 386
P ++ LY + Q+ A DN+ + L E +
Sbjct: 641 VCPYRAIESLYRKHCLEQGKQQLMPQEAGLAEEFLLTDNSAIWQTVEELDYLEVEAEAKM 700
Query: 387 SFIDCSKSAKRLEVIANVLDKKKLAEASSTDTSTDDADTPREIGFIKLPHKDGEHLNVGN 446
+ + + L + A K + +D D P F KLPHKDG NVG+
Sbjct: 701 ENLRAAVPGQPLALTARGGPKDTQPSYHHGNGPYNDVDIP-GCWFFKLPHKDGNSCNVGS 759
Query: 447 PLSRDFINKFSDNSLAGVDIGAK--RIIEISRMLSYWRNNHERVKKQFVVWLNKKDLPRR 504
P ++DF+ K D +L GA R +EI++M+S+WRN H+R+ Q VVWL + LPR
Sbjct: 760 PFAKDFLPKMEDGTLQAGPGGASGPRALEINKMISFWRNAHKRISSQMVVWLPRSALPRA 819
Query: 505 LVE--NIESEGRDYGVILPQLIVSGTLTRRAVEATWMTASNAVGERVGSELRAMIQAPDG 562
++ + + EG YG ILPQ++ +GT+TRRAVE TW+TASNA +RVGSEL+AM+QAP G
Sbjct: 820 VIRHPDYDEEGL-YGAILPQVVTAGTITRRAVEPTWLTASNARPDRVGSELKAMVQAPPG 878
Query: 563 YSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMHSITAKAVGISR 622
Y+++GADVDSQELWIA+V+GD++ A HG T GWMTL G+KS TD+HS TA VGISR
Sbjct: 879 YTLVGADVDSQELWIAAVLGDAHFAGMHGCTAFGWMTLQGRKSRGTDLHSKTATTVGISR 938
Query: 623 EHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKGKKLYRLKDGHLE 682
EHAKI NY RIYGAG+ FAERLL QFN +++ +A KA++MY TKG + YRL D E
Sbjct: 939 EHAKIFNYGRIYGAGQPFAERLLMQFNHRLTQQEAAEKAQQMYAATKGLRWYRLSD-EGE 997
Query: 683 ELIKRVYSKYE---------------AREVCSAYNTSVDKIFDKPQWYGGTESAMFNRLE 727
L++ + + RE ++ + W GGTES MFN+LE
Sbjct: 998 WLVRELNLPVDRTEGGWISLQDLRKVQRETARKSQWKKWEVVAERAWKGGTESEMFNKLE 1057
Query: 728 EIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLVCMRWLVS 787
IATS P TP L C +SRALEP S +F+ +R+NWVVQS AVD+LHLMLV M+WL
Sbjct: 1058 SIATSDIPRTPVLGCCISRALEP-SAVQEEFMTSRVNWVVQSSAVDYLHLMLVAMKWLFE 1116
Query: 788 R---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIPLSISFFS 844
D RF ISIHDE+RYLV +E++Y ALAL +TNLLTR KL + D+P S++FFS
Sbjct: 1117 EFAIDGRFCISIHDEVRYLVREEDRYRAALALQITNLLTRCMFAYKLGLNDLPQSVAFFS 1176
Query: 845 GVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKANGVI 894
V+ID+ LRKE DCKTPSNP G+ + YGIP GE LDIYQ I+ G +
Sbjct: 1177 AVDIDRCLRKEVTMDCKTPSNPTGMERRYGIPQGEALDIYQIIELTKGSL 1226
>gi|334314345|ref|XP_003340027.1| PREDICTED: DNA polymerase subunit gamma-1-like [Monodelphis
domestica]
Length = 1274
Score = 719 bits (1856), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/931 (43%), Positives = 549/931 (58%), Gaps = 105/931 (11%)
Query: 6 WTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLATFEV 65
W ++SS+N+L++V+ LY G L+K R +FV+G+++DI N+ +LM YCA D AT
Sbjct: 403 WLDISSINNLADVHSLYVGGPPLEKEARELFVKGTMKDIRENFQDLMQYCALDVQAT--- 459
Query: 66 IQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLAGML 125
+EV Q PLF+ER PHPVTLAGML
Sbjct: 460 -----------------------------------YEVFQEQLPLFMERCPHPVTLAGML 484
Query: 126 ELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDKYKDSLWLWDQ 185
E+ +YLPVN NW +Y E+ T+ +L EMK LMD + AC L+ D+YKD+ WLWD
Sbjct: 485 EMGVSYLPVNQNWERYLVEAQSTYEELQREMKKSLMDLANDACHLVSGDRYKDNPWLWDL 544
Query: 186 DWSVKDLKLKKKANKTLSVDQETEEPEEF-----YEINKNGEDQTEDEFVKRRRELVEKF 240
+W +++ KLKKK + + P + E ++ E+E ++ + +
Sbjct: 545 EWDLQEFKLKKKKIRKNDQNISCRSPAKAKNSSEMEWQEDPGPPIEEEELQSDSAIRTRM 604
Query: 241 KPLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIPGP 300
+ L +T LP +L G+P WYRKLC P D D WIPGP
Sbjct: 605 EELKETAILLPKRCQHLPGHPGWYRKLC--PRLNDPD------------------WIPGP 644
Query: 301 SLISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTDIKVPDAEN-----IPLEQLK 355
SLIS M++TPKL+ LTW P+H+ HGWGYLVP D + D+ P ++
Sbjct: 645 SLISLQMRVTPKLMMLTWDGFPVHYSEKHGWGYLVPGRQDNLLVDSSETDVAACPYRAIE 704
Query: 356 QLYNNITKQDNCEANVDNAQNSLRDSVETNISFIDCSKSAKRLEVIANV-LDKKKLAEAS 414
LY ++ E V Q + + T+ + + RLE A+ D+ E +
Sbjct: 705 ALYQKYCQETGKEQLV--FQPLPEEFMLTDSTVWQTVEELSRLEPDADFETDRATQEETN 762
Query: 415 STDTST----------DDADTPREIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGV 464
S S +D + P F KLPHKDG + NVG+P ++DF+ K D +L
Sbjct: 763 SLQLSQPAYHHGNGPYNDVNIPG-CWFFKLPHKDGNNYNVGSPFAKDFLPKMEDGTLQAG 821
Query: 465 DIGAK--RIIEISRMLSYWRNNHERVKKQFVVWLNKKDLPRRLVENIE-SEGRDYGVILP 521
GA R +EI++M+S+WRN H+R+ Q VVWL K +LPR ++ + + E YG ILP
Sbjct: 822 PGGASGPRALEINKMVSFWRNAHKRISSQMVVWLQKGELPRTVIRHKDYDEECYYGAILP 881
Query: 522 QLIVSGTLTRRAVEATWMTASNAVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVI 581
Q++ +GT+TRRAVE TW+TASNA +RVGSEL+AM+QAP GY ++GADVDSQELWIA+V+
Sbjct: 882 QVVTAGTITRRAVEPTWLTASNARVDRVGSELKAMVQAPPGYVLVGADVDSQELWIAAVL 941
Query: 582 GDSYCAKEHGATPLGWMTLSGQKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFA 641
GD++ A+ HG+T GWMTL G+KS+ TD+HS TA VGISREHAKI NY RIYGAG+ FA
Sbjct: 942 GDAHFARIHGSTAFGWMTLQGKKSSGTDLHSKTASTVGISREHAKIFNYGRIYGAGQPFA 1001
Query: 642 ERLLKQFNPEMSKSDAKSKARKMYTLTKGKKLYRL-KDGH--LEELIKRVYSKYEA---- 694
ERLL QFN ++ AK KA++MY +TKG + Y+L KDG ++EL +V K +
Sbjct: 1002 ERLLMQFNHRLTPQQAKEKAQQMYAVTKGLRRYQLSKDGEWLVKELGIQVDRKEDGWVSL 1061
Query: 695 ---REVCSA-----YNTSVDKIFDKPQWYGGTESAMFNRLEEIATSLQPVTPFLNCRLSR 746
R++ A Y + + D+ W GGTES MFN+LE IA S P TP L C++SR
Sbjct: 1062 QDLRKIQKAASRMSYRKKWNLVADR-AWAGGTESEMFNKLESIAMSDAPRTPVLGCQISR 1120
Query: 747 ALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLVCMRWLVSR---DTRFVISIHDEIRYL 803
ALEP +F+ +R+NWVVQS AVD+LHLMLV M+WL RF ISIHDE+RYL
Sbjct: 1121 ALEPAVV-QGEFVTSRVNWVVQSSAVDYLHLMLVAMKWLFEEFDISGRFCISIHDEVRYL 1179
Query: 804 VPDEEKYETALALHVTNLLTRAFCIKKLDMTDIPLSISFFSGVEIDKVLRKESDNDCKTP 863
V ++++Y ALAL +TNLLTR KL + D+P S++FFS V+ID+ LRKE DCKTP
Sbjct: 1180 VTEKDRYRAALALQITNLLTRCMFAYKLGLNDLPQSVAFFSAVDIDRCLRKEVTMDCKTP 1239
Query: 864 SNPYGLCKGYGIPLGEILDIYQTIDKANGVI 894
SNP GL + YGIP GE LDIYQ I G +
Sbjct: 1240 SNPTGLERRYGIPQGEALDIYQIIKLTKGSL 1270
>gi|351715534|gb|EHB18453.1| DNA polymerase subunit gamma-1 [Heterocephalus glaber]
Length = 1214
Score = 719 bits (1856), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/950 (41%), Positives = 537/950 (56%), Gaps = 131/950 (13%)
Query: 6 WTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLATFEV 65
W ++SS+N+L++V+ LY G L+K R +FV+GS++DI N+ +LM YCA+D AT
Sbjct: 327 WVDISSVNNLADVHSLYVGGPPLEKEARELFVKGSMKDIRENFQDLMQYCAQDVWAT--- 383
Query: 66 IQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLAGML 125
+EV Q PLFLER PHPVTLAGML
Sbjct: 384 -----------------------------------YEVFQQQMPLFLERCPHPVTLAGML 408
Query: 126 ELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDKYKDSLWLWDQ 185
E+ +YLPVN NW +Y E+ T+ +L EMK LMD + AC LL ++YK+ WLWD
Sbjct: 409 EMGVSYLPVNQNWERYLAEAQSTYEELQREMKKSLMDLANDACQLLSGERYKEDPWLWDL 468
Query: 186 DWSVKDLKL--------KKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRRELV 237
+W +++ K ++ + + P + + G E+EF R+ +
Sbjct: 469 EWDLQEFKQKKTKKVKKEEPVTASKLPIEGAGAPGDPTDQEDPGPPSEEEEF---RQNIT 525
Query: 238 EK--FKPLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEA 295
+ + L T + LP +L G+P WYRKLC + + D A
Sbjct: 526 AQACLQQLKGTTELLPKRLQHLPGHPGWYRKLCPR------------------LDDP--A 565
Query: 296 WIPGPSLISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTD--IKVPDAENI--PL 351
W PGPSL+S M++TPKL+++TW PLH+ HGWGYLVP D KVP++ + P
Sbjct: 566 WTPGPSLLSLQMRVTPKLMAMTWDGFPLHYSERHGWGYLVPGRRDNLAKVPESAGVACPY 625
Query: 352 EQLKQLYNN----------------------ITKQDNCEANVDNAQNSLRDSVETNISFI 389
++ LY +T V+ L E + +
Sbjct: 626 RAIESLYQKHRVEQGKQQLLPHEAGLAEEFLLTDSSTMWQTVEEL-GCLDPEAEAIVENL 684
Query: 390 DCSKSAKRLEVIANVLDKKKLAEASSTDTSTDDADTPREIGFIKLPHKDGEHLNVGNPLS 449
+ A L + A K + +D + P F KLPHKDG NVG+P +
Sbjct: 685 PAAGPALPLVLTAAGGPKGSQPTYHHGNGPYNDVNVP-GCWFFKLPHKDGNSFNVGSPFA 743
Query: 450 RDFINKFSDNSLAGVDIGAK--RIIEISRMLSYWRNNHERVKKQFVVWLNKKDLPRRLVE 507
+DF+ K D +L GA R +EI++M+S+WRN H+R+ Q VVWL + LPR +
Sbjct: 744 KDFLPKMEDGTLQAGPGGASGPRALEINKMISFWRNAHKRISSQMVVWLPRSALPRAVTR 803
Query: 508 --NIESEGRDYGVILPQLIVSGTLTRRAVEATWMTASNAVGERVGSELRAMIQAPDGYSI 565
N + EGR YG ILPQ++ +GT+TRRAVE TW+TASNA +RVGSEL+AM+QAP GY +
Sbjct: 804 HPNYDEEGR-YGAILPQVVTAGTITRRAVEPTWLTASNARPDRVGSELKAMVQAPPGYVL 862
Query: 566 IGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMHSITAKAVGISREHA 625
+GADVDSQELWIA+V+GD++ A HG T GWMTL G+KSN TD+HS TA VGISREHA
Sbjct: 863 VGADVDSQELWIAAVLGDAHFAGIHGCTAFGWMTLQGKKSNGTDLHSKTASTVGISREHA 922
Query: 626 KIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKGKKLYRL--------- 676
K+ NY RIYGAG+ FAERLL QFN +++ +A KA++MY +TKG + YRL
Sbjct: 923 KVFNYGRIYGAGQPFAERLLMQFNHRLTRQEAAEKAQQMYAITKGLRWYRLTEEGEWLVQ 982
Query: 677 ---------KDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQWYGGTESAMFNRLE 727
+DG + R + R+ + + +++ W GGTES MFN+LE
Sbjct: 983 QLALPVDRTEDGWVSLKDLRKIQREAIRKSRRKWEVAAERV-----WMGGTESEMFNKLE 1037
Query: 728 EIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLVCMRWLVS 787
IA S P TP L CR+SRALEP S +F+ +R+NWVVQS AVD+LHLMLV M+WL
Sbjct: 1038 SIAMSDTPQTPVLGCRISRALEP-STVREQFMTSRVNWVVQSSAVDYLHLMLVAMKWLFE 1096
Query: 788 R---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIPLSISFFS 844
D RF ISIHDE+RYLV +E++Y ALAL +TNLLTR KL + D+P S++FFS
Sbjct: 1097 EFAIDGRFCISIHDEVRYLVREEDRYRAALALQITNLLTRCMFAYKLGLNDLPQSVAFFS 1156
Query: 845 GVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKANGVI 894
V+ID+ LRKE DCKTPSN G+ + YGIP GE LDIYQ I+ G +
Sbjct: 1157 AVDIDRCLRKEVTMDCKTPSNQNGMERRYGIPQGEALDIYQIIELTKGSL 1206
>gi|148675119|gb|EDL07066.1| polymerase (DNA directed), gamma, isoform CRA_b [Mus musculus]
Length = 1239
Score = 719 bits (1856), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/946 (43%), Positives = 540/946 (57%), Gaps = 122/946 (12%)
Query: 6 WTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLATFEV 65
W ++SS N+L++V+ LY G L+K R +FV+GS+ DI N+ +LM YCA+D AT
Sbjct: 351 WMDISSANNLADVHNLYVGGPPLEKEPRELFVKGSMRDIRENFQDLMQYCARDVWAT--- 407
Query: 66 IQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLAGML 125
FEV Q PLFLER PHPVTLAGML
Sbjct: 408 -----------------------------------FEVFQQQLPLFLERCPHPVTLAGML 432
Query: 126 ELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDKYKDSLWLWDQ 185
E+ +YLPVN NW +Y E+ T+ +L EMK LMD + AC LL ++YK+ WLWD
Sbjct: 433 EMGVSYLPVNQNWERYLTEAQNTYEELQREMKKSLMDLANDACQLLSGERYKEDPWLWDL 492
Query: 186 DWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQ------TEDEFVKRRRELVEK 239
+W +++ K KK ++ P E + DQ +E+E ++R +
Sbjct: 493 EWDLQEFKQKKAKKVKKPAS-ASKLPIEGAGPFGDPMDQEDPGPPSEEEELQRSVTAHNR 551
Query: 240 FKPLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIPG 299
+ L T D LP +L G+P WYRKLC + + D AW PG
Sbjct: 552 LQQLRSTTDLLPKRPQHLPGHPGWYRKLCPR------------------LDDP--AWAPG 591
Query: 300 PSLISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTD-IKVPD--------AENIP 350
PSL+S M++TPKL++LTW PLH+ HGWGYLVP D + P A P
Sbjct: 592 PSLLSLQMRVTPKLMALTWDGFPLHYSDSHGWGYLVPGRRDNLTEPPVSPTVESAAVTCP 651
Query: 351 LEQLKQLYNNIT----KQDNCEANVDNAQ-------NSLRDSVETNISFIDCSKSAKR-- 397
++ LY KQ VD A+ +++ +VE + +D AK
Sbjct: 652 YRAIESLYRKHCLEQGKQQLEPQEVDLAEEFLLTDSSAMWQTVE-ELGCLDVEAEAKMEN 710
Query: 398 ------LEVIANVLDKKKLAEASSTDTSTDDADTPREIGFIKLPHKDGEHLNVGNPLSRD 451
L + A K + +D + P F KLPHKDG + NVG+P ++D
Sbjct: 711 SGLSQPLVLPAACAPKSSQPTYHHGNGPYNDVNIP-GCWFFKLPHKDGNNYNVGSPFAKD 769
Query: 452 FINKFSDNSLAGVDIGAK--RIIEISRMLSYWRNNHERVKKQFVVWLNKKDLPRRLVEN- 508
F+ K D +L GA R +EI++M+S+WRN H+R+ Q VVWL + LPR + +
Sbjct: 770 FLPKMEDGTLQAGPGGASGPRALEINKMISFWRNAHKRISSQMVVWLPRSALPRVVTRHP 829
Query: 509 -IESEGRDYGVILPQLIVSGTLTRRAVEATWMTASNAVGERVGSELRAMIQAPDGYSIIG 567
+ EG YG ILPQ++ +GT+TRRAVE TW+TASNA +RVGSEL+AM+QAP GY ++G
Sbjct: 830 SFDEEGH-YGAILPQVVTAGTITRRAVEPTWLTASNARPDRVGSELKAMVQAPPGYVLVG 888
Query: 568 ADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMHSITAKAVGISREHAKI 627
ADVDSQELWIA+V+GD++ A HG T GWMTL G+KS TD+HS TA VGISREHAKI
Sbjct: 889 ADVDSQELWIAAVLGDAHFAGMHGCTAFGWMTLQGRKSRGTDLHSKTAATVGISREHAKI 948
Query: 628 INYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKGKKLYRLK-DGHLEELIK 686
NY RIYGAG+ FAERLL QFN +++ +A KA++MY +TKG + YRL DG E L+K
Sbjct: 949 FNYGRIYGAGQSFAERLLMQFNHRLTRQEAAEKAQQMYAVTKGLRRYRLSADG--EWLVK 1006
Query: 687 RVYSKYE---------------AREVCSAYNTSVDKIFDKPQWYGGTESAMFNRLEEIAT 731
++ + RE ++ + W GGTES MFN+LE IA
Sbjct: 1007 QLNLPVDRTEDGWVSLQDLRMIRREASRKSRWKKWEVASERAWTGGTESEMFNKLESIAM 1066
Query: 732 SLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLVCMRWLVSR--- 788
S P TP L C +SRALEP S +FI +R+NWVVQS AVD+LHLMLV M+WL
Sbjct: 1067 SDTPRTPVLGCCISRALEP-SVVQGEFITSRVNWVVQSSAVDYLHLMLVAMKWLFEEFAI 1125
Query: 789 DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIPLSISFFSGVEI 848
D RF ISIHDE+RYLV +E++Y ALAL +TNLLTR KL + D+P S++FFS V+I
Sbjct: 1126 DGRFCISIHDEVRYLVREEDRYRAALALQITNLLTRCMFAYKLGLNDLPQSVAFFSAVDI 1185
Query: 849 DKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKANGVI 894
D+ LRKE DCKTPSNP G+ + YGIP GE LDIYQ I+ G +
Sbjct: 1186 DQCLRKEVTMDCKTPSNPTGMERRYGIPQGEALDIYQIIELTKGSL 1231
>gi|158255998|dbj|BAF83970.1| unnamed protein product [Homo sapiens]
Length = 1239
Score = 719 bits (1855), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/950 (42%), Positives = 539/950 (56%), Gaps = 126/950 (13%)
Query: 6 WTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLATFEV 65
W ++SS+NSL+EV++LY G L+K R +FV+G+++DI N+ +LM YCA+D AT
Sbjct: 347 WLDISSVNSLAEVHRLYVGGPPLEKEPRELFVKGTMKDIRENFQDLMQYCAQDVWATH-- 404
Query: 66 IQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLAGML 125
EV Q PLFLER PHPVTLAGML
Sbjct: 405 ------------------------------------EVFQQQLPLFLERCPHPVTLAGML 428
Query: 126 ELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDKYKDSLWLWDQ 185
E+ +YLPVN NW +Y E+ T+ +L EMK LMD + AC LL ++YK+ WLWD
Sbjct: 429 EMGVSYLPVNQNWERYLAEAQGTYEELQREMKKSLMDLANDACQLLSGERYKEDPWLWDL 488
Query: 186 DWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQT-------EDEFVK--RRREL 236
+W +++ K KK ++ P E + DQ E+EF + R
Sbjct: 489 EWDLQEFKQKKAKKVKKEPATASKLPIEGAGAPGDPMDQEDLGPCSEEEEFQQDVMARAC 548
Query: 237 VEKFKPLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAW 296
++K K T + LP +L G+P WYRKLC + + D AW
Sbjct: 549 LQKLK---GTTELLPKRPQHLPGHPGWYRKLCPR------------------LDDP--AW 585
Query: 297 IPGPSLISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTD--IKVPDAENI----- 349
PGPSL+S M++TPKL++LTW PLH+ HGWGYLVP D K+P +
Sbjct: 586 TPGPSLLSLQMRVTPKLMALTWDGFPLHYSERHGWGYLVPGRRDNLAKLPTGTTLESAGV 645
Query: 350 --PLEQLKQLY---------NNITKQDNCEAN----VDNAQ--------NSLRDSVETNI 386
P ++ LY + Q+ A DN+ + L E +
Sbjct: 646 VCPYRAIESLYRKHCLEQGKQQLMPQEAGLAEEFLLTDNSAIWQTVEELDYLEVEAEAKM 705
Query: 387 SFIDCSKSAKRLEVIANVLDKKKLAEASSTDTSTDDADTPREIGFIKLPHKDGEHLNVGN 446
+ + + L + A K + +D D P F KLPHKDG NVG+
Sbjct: 706 ENLRAAVPGQPLALTARGGPKDTQPSYHHGNGPYNDVDIP-GCWFFKLPHKDGNSCNVGS 764
Query: 447 PLSRDFINKFSDNSLAGVDIGAK--RIIEISRMLSYWRNNHERVKKQFVVWLNKKDLPRR 504
P ++DF+ K D +L GA R +EI++M+S+WRN H+R+ Q VVWL + LPR
Sbjct: 765 PFAKDFLPKMEDGTLQAGPGGASGPRALEINKMISFWRNAHKRISSQMVVWLPRSALPRA 824
Query: 505 LVE--NIESEGRDYGVILPQLIVSGTLTRRAVEATWMTASNAVGERVGSELRAMIQAPDG 562
++ + + EG YG ILPQ++ +GT+TRRAVE TW+TASNA +RVGSEL+AM+QAP G
Sbjct: 825 VIRHPDYDEEGL-YGAILPQVVTAGTITRRAVEPTWLTASNARPDRVGSELKAMVQAPPG 883
Query: 563 YSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMHSITAKAVGISR 622
Y+++GADVDSQELWIA+V+GD++ A HG T GWMTL G+KS TD+HS TA VGISR
Sbjct: 884 YTLVGADVDSQELWIAAVLGDAHFAGMHGCTAFGWMTLQGRKSRGTDLHSKTATTVGISR 943
Query: 623 EHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKGKKLYRLKDGHLE 682
EHAKI NY RIYGAG+ FAERLL QFN +++ +A KA++MY TKG + YRL D E
Sbjct: 944 EHAKIFNYGRIYGAGQPFAERLLMQFNHRLTQQEAAEKAQQMYAATKGLRWYRLSD-EGE 1002
Query: 683 ELIKRVYSKYE---------------AREVCSAYNTSVDKIFDKPQWYGGTESAMFNRLE 727
L++ + + RE ++ + W GGTES MFN+LE
Sbjct: 1003 WLVRELNLPVDRTEGGWISLQDLRKVQRETARKSQWKKWEVVAERAWKGGTESEMFNKLE 1062
Query: 728 EIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLVCMRWLVS 787
IATS P TP L C +SRALEP S +F+ +R+NWVVQS AVD+LHLMLV M+WL
Sbjct: 1063 SIATSDIPRTPVLGCCISRALEP-SAVQEEFMTSRVNWVVQSSAVDYLHLMLVAMKWLFE 1121
Query: 788 R---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIPLSISFFS 844
D RF ISIHDE+RYLV +E++Y ALAL +TNLLTR KL + D+P S++FFS
Sbjct: 1122 EFAIDGRFCISIHDEVRYLVREEDRYRAALALQITNLLTRCMFAYKLGLNDLPQSVAFFS 1181
Query: 845 GVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKANGVI 894
V+ID+ LRKE DCKTPSNP G+ + YGIP GE LDIYQ I+ G +
Sbjct: 1182 AVDIDRCLRKEVTMDCKTPSNPTGMERRYGIPQGEALDIYQIIELTKGSL 1231
>gi|21779923|gb|AAM77583.1|AF497906_1 polymerase (DNA directed), gamma [Homo sapiens]
Length = 1240
Score = 719 bits (1855), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/950 (42%), Positives = 539/950 (56%), Gaps = 126/950 (13%)
Query: 6 WTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLATFEV 65
W ++SS+NSL+EV++LY G L+K R +FV+G+++DI N+ +LM YCA+D AT
Sbjct: 348 WLDISSVNSLAEVHRLYVGGPPLEKEPRELFVKGTMKDIRENFQDLMQYCAQDVWATH-- 405
Query: 66 IQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLAGML 125
EV Q PLFLER PHPVTLAGML
Sbjct: 406 ------------------------------------EVFQQQLPLFLERCPHPVTLAGML 429
Query: 126 ELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDKYKDSLWLWDQ 185
E+ +YLPVN NW +Y E+ T+ +L EMK LMD + AC LL ++YK+ WLWD
Sbjct: 430 EMGVSYLPVNQNWERYLAEAQGTYEELQREMKKSLMDLANDACQLLSGERYKEDPWLWDL 489
Query: 186 DWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQT-------EDEFVK--RRREL 236
+W +++ K KK ++ P E + DQ E+EF + R
Sbjct: 490 EWDLQEFKQKKAKKVKKEPATASKLPIEGAGAPGDPMDQEDLGPCSEEEEFQQDVMARAC 549
Query: 237 VEKFKPLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAW 296
++K K T + LP +L G+P WYRKLC + + D AW
Sbjct: 550 LQKLK---GTTELLPKRPQHLPGHPGWYRKLCPR------------------LDDP--AW 586
Query: 297 IPGPSLISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTD--IKVPDAENI----- 349
PGPSL+S M++TPKL++LTW PLH+ HGWGYLVP D K+P +
Sbjct: 587 TPGPSLLSLQMRVTPKLMALTWDGFPLHYSERHGWGYLVPGRRDNLAKLPTGTTLESAGV 646
Query: 350 --PLEQLKQLY---------NNITKQDNCEAN----VDNAQ--------NSLRDSVETNI 386
P ++ LY + Q+ A DN+ + L E +
Sbjct: 647 VCPYRAIESLYRKHCLEQGKQQLMPQEAGLAEEFLLTDNSAIWQTVEELDYLEVEAEAKM 706
Query: 387 SFIDCSKSAKRLEVIANVLDKKKLAEASSTDTSTDDADTPREIGFIKLPHKDGEHLNVGN 446
+ + + L + A K + +D D P F KLPHKDG NVG+
Sbjct: 707 ENLRAAVPGQPLALTARGGPKDTQPSYHHGNGPYNDVDIP-GCWFFKLPHKDGNSCNVGS 765
Query: 447 PLSRDFINKFSDNSLAGVDIGAK--RIIEISRMLSYWRNNHERVKKQFVVWLNKKDLPRR 504
P ++DF+ K D +L GA R +EI++M+S+WRN H+R+ Q VVWL + LPR
Sbjct: 766 PFAKDFLPKMEDGTLQAGPGGASGPRALEINKMISFWRNAHKRISSQMVVWLPRSALPRA 825
Query: 505 LVE--NIESEGRDYGVILPQLIVSGTLTRRAVEATWMTASNAVGERVGSELRAMIQAPDG 562
++ + + EG YG ILPQ++ +GT+TRRAVE TW+TASNA +RVGSEL+AM+QAP G
Sbjct: 826 VIRHPDYDEEGL-YGAILPQVVTAGTITRRAVEPTWLTASNARPDRVGSELKAMVQAPPG 884
Query: 563 YSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMHSITAKAVGISR 622
Y+++GADVDSQELWIA+V+GD++ A HG T GWMTL G+KS TD+HS TA VGISR
Sbjct: 885 YTLVGADVDSQELWIAAVLGDAHFAGMHGCTAFGWMTLQGRKSRGTDLHSKTATTVGISR 944
Query: 623 EHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKGKKLYRLKDGHLE 682
EHAKI NY RIYGAG+ FAERLL QFN +++ +A KA++MY TKG + YRL D E
Sbjct: 945 EHAKIFNYGRIYGAGQPFAERLLMQFNHRLTQQEAAEKAQQMYAATKGLRWYRLSD-EGE 1003
Query: 683 ELIKRVYSKYE---------------AREVCSAYNTSVDKIFDKPQWYGGTESAMFNRLE 727
L++ + + RE ++ + W GGTES MFN+LE
Sbjct: 1004 WLVRELNLPVDRTEGGWISLQDLRKVQRETARKSQWKKWEVVAERAWKGGTESEMFNKLE 1063
Query: 728 EIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLVCMRWLVS 787
IATS P TP L C +SRALEP S +F+ +R+NWVVQS AVD+LHLMLV M+WL
Sbjct: 1064 SIATSDIPRTPVLGCCISRALEP-SAVQEEFMTSRVNWVVQSSAVDYLHLMLVAMKWLFE 1122
Query: 788 R---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIPLSISFFS 844
D RF ISIHDE+RYLV +E++Y ALAL +TNLLTR KL + D+P S++FFS
Sbjct: 1123 EFAIDGRFCISIHDEVRYLVREEDRYRAALALQITNLLTRCMFAYKLGLNDLPQSVAFFS 1182
Query: 845 GVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKANGVI 894
V+ID+ LRKE DCKTPSNP G+ + YGIP GE LDIYQ I+ G +
Sbjct: 1183 AVDIDRCLRKEVTMDCKTPSNPTGMERRYGIPQGEALDIYQIIELTKGSL 1232
>gi|4505937|ref|NP_002684.1| DNA polymerase subunit gamma-1 [Homo sapiens]
gi|187171277|ref|NP_001119603.1| DNA polymerase subunit gamma-1 [Homo sapiens]
gi|1706507|sp|P54098.1|DPOG1_HUMAN RecName: Full=DNA polymerase subunit gamma-1; AltName:
Full=Mitochondrial DNA polymerase catalytic subunit;
AltName: Full=PolG-alpha
gi|1399956|gb|AAC50712.1| DNA polymerase gamma [Homo sapiens]
gi|1438508|emb|CAA66719.1| DNA polymerase gamma [Homo sapiens]
gi|27502689|gb|AAH42571.1| Polymerase (DNA directed), gamma [Homo sapiens]
gi|29791648|gb|AAH50559.1| POLG protein [Homo sapiens]
gi|119622450|gb|EAX02045.1| polymerase (DNA directed), gamma, isoform CRA_a [Homo sapiens]
gi|119622452|gb|EAX02047.1| polymerase (DNA directed), gamma, isoform CRA_a [Homo sapiens]
gi|311347818|gb|ADP90854.1| DNA polymerase subunit gamma-1 [Homo sapiens]
gi|311347820|gb|ADP90855.1| DNA polymerase subunit gamma-1 [Homo sapiens]
gi|311347822|gb|ADP90856.1| DNA polymerase subunit gamma-1 [Homo sapiens]
gi|311347824|gb|ADP90857.1| DNA polymerase subunit gamma-1 [Homo sapiens]
gi|311347826|gb|ADP90858.1| DNA polymerase subunit gamma-1 [Homo sapiens]
gi|311347828|gb|ADP90859.1| DNA polymerase subunit gamma-1 [Homo sapiens]
gi|311347830|gb|ADP90860.1| DNA polymerase subunit gamma-1 [Homo sapiens]
gi|311347832|gb|ADP90861.1| DNA polymerase subunit gamma-1 [Homo sapiens]
gi|311347834|gb|ADP90862.1| DNA polymerase subunit gamma-1 [Homo sapiens]
gi|311347836|gb|ADP90863.1| DNA polymerase subunit gamma-1 [Homo sapiens]
gi|311347838|gb|ADP90864.1| DNA polymerase subunit gamma-1 [Homo sapiens]
gi|311347840|gb|ADP90865.1| DNA polymerase subunit gamma-1 [Homo sapiens]
gi|311347842|gb|ADP90866.1| DNA polymerase subunit gamma-1 [Homo sapiens]
gi|311347846|gb|ADP90868.1| DNA polymerase subunit gamma-1 [Homo sapiens]
gi|311347848|gb|ADP90869.1| DNA polymerase subunit gamma-1 [Homo sapiens]
gi|311347850|gb|ADP90870.1| DNA polymerase subunit gamma-1 [Homo sapiens]
gi|311347854|gb|ADP90872.1| DNA polymerase subunit gamma-1 [Homo sapiens]
gi|311347856|gb|ADP90873.1| DNA polymerase subunit gamma-1 [Homo sapiens]
gi|311347858|gb|ADP90874.1| DNA polymerase subunit gamma-1 [Homo sapiens]
gi|311347860|gb|ADP90875.1| DNA polymerase subunit gamma-1 [Homo sapiens]
gi|311347862|gb|ADP90876.1| DNA polymerase subunit gamma-1 [Homo sapiens]
gi|311347864|gb|ADP90877.1| DNA polymerase subunit gamma-1 [Homo sapiens]
gi|311347866|gb|ADP90878.1| DNA polymerase subunit gamma-1 [Homo sapiens]
gi|311347868|gb|ADP90879.1| DNA polymerase subunit gamma-1 [Homo sapiens]
gi|311347870|gb|ADP90880.1| DNA polymerase subunit gamma-1 [Homo sapiens]
gi|311347872|gb|ADP90881.1| DNA polymerase subunit gamma-1 [Homo sapiens]
gi|311347874|gb|ADP90882.1| DNA polymerase subunit gamma-1 [Homo sapiens]
gi|311347876|gb|ADP90883.1| DNA polymerase subunit gamma-1 [Homo sapiens]
gi|311347880|gb|ADP90885.1| DNA polymerase subunit gamma-1 [Homo sapiens]
gi|311347882|gb|ADP90886.1| DNA polymerase subunit gamma-1 [Homo sapiens]
gi|311347884|gb|ADP90887.1| DNA polymerase subunit gamma-1 [Homo sapiens]
gi|311347886|gb|ADP90888.1| DNA polymerase subunit gamma-1 [Homo sapiens]
gi|311347888|gb|ADP90889.1| DNA polymerase subunit gamma-1 [Homo sapiens]
gi|311347890|gb|ADP90890.1| DNA polymerase subunit gamma-1 [Homo sapiens]
gi|311347892|gb|ADP90891.1| DNA polymerase subunit gamma-1 [Homo sapiens]
gi|311347894|gb|ADP90892.1| DNA polymerase subunit gamma-1 [Homo sapiens]
gi|311347896|gb|ADP90893.1| DNA polymerase subunit gamma-1 [Homo sapiens]
Length = 1239
Score = 719 bits (1855), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/950 (42%), Positives = 539/950 (56%), Gaps = 126/950 (13%)
Query: 6 WTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLATFEV 65
W ++SS+NSL+EV++LY G L+K R +FV+G+++DI N+ +LM YCA+D AT
Sbjct: 347 WLDISSVNSLAEVHRLYVGGPPLEKEPRELFVKGTMKDIRENFQDLMQYCAQDVWATH-- 404
Query: 66 IQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLAGML 125
EV Q PLFLER PHPVTLAGML
Sbjct: 405 ------------------------------------EVFQQQLPLFLERCPHPVTLAGML 428
Query: 126 ELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDKYKDSLWLWDQ 185
E+ +YLPVN NW +Y E+ T+ +L EMK LMD + AC LL ++YK+ WLWD
Sbjct: 429 EMGVSYLPVNQNWERYLAEAQGTYEELQREMKKSLMDLANDACQLLSGERYKEDPWLWDL 488
Query: 186 DWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQT-------EDEFVK--RRREL 236
+W +++ K KK ++ P E + DQ E+EF + R
Sbjct: 489 EWDLQEFKQKKAKKVKKEPATASKLPIEGAGAPGDPMDQEDLGPCSEEEEFQQDVMARAC 548
Query: 237 VEKFKPLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAW 296
++K K T + LP +L G+P WYRKLC + + D AW
Sbjct: 549 LQKLK---GTTELLPKRPQHLPGHPGWYRKLCPR------------------LDDP--AW 585
Query: 297 IPGPSLISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTD--IKVPDAENI----- 349
PGPSL+S M++TPKL++LTW PLH+ HGWGYLVP D K+P +
Sbjct: 586 TPGPSLLSLQMRVTPKLMALTWDGFPLHYSERHGWGYLVPGRRDNLAKLPTGTTLESAGV 645
Query: 350 --PLEQLKQLY---------NNITKQDNCEAN----VDNAQ--------NSLRDSVETNI 386
P ++ LY + Q+ A DN+ + L E +
Sbjct: 646 VCPYRAIESLYRKHCLEQGKQQLMPQEAGLAEEFLLTDNSAIWQTVEELDYLEVEAEAKM 705
Query: 387 SFIDCSKSAKRLEVIANVLDKKKLAEASSTDTSTDDADTPREIGFIKLPHKDGEHLNVGN 446
+ + + L + A K + +D D P F KLPHKDG NVG+
Sbjct: 706 ENLRAAVPGQPLALTARGGPKDTQPSYHHGNGPYNDVDIP-GCWFFKLPHKDGNSCNVGS 764
Query: 447 PLSRDFINKFSDNSLAGVDIGAK--RIIEISRMLSYWRNNHERVKKQFVVWLNKKDLPRR 504
P ++DF+ K D +L GA R +EI++M+S+WRN H+R+ Q VVWL + LPR
Sbjct: 765 PFAKDFLPKMEDGTLQAGPGGASGPRALEINKMISFWRNAHKRISSQMVVWLPRSALPRA 824
Query: 505 LVE--NIESEGRDYGVILPQLIVSGTLTRRAVEATWMTASNAVGERVGSELRAMIQAPDG 562
++ + + EG YG ILPQ++ +GT+TRRAVE TW+TASNA +RVGSEL+AM+QAP G
Sbjct: 825 VIRHPDYDEEGL-YGAILPQVVTAGTITRRAVEPTWLTASNARPDRVGSELKAMVQAPPG 883
Query: 563 YSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMHSITAKAVGISR 622
Y+++GADVDSQELWIA+V+GD++ A HG T GWMTL G+KS TD+HS TA VGISR
Sbjct: 884 YTLVGADVDSQELWIAAVLGDAHFAGMHGCTAFGWMTLQGRKSRGTDLHSKTATTVGISR 943
Query: 623 EHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKGKKLYRLKDGHLE 682
EHAKI NY RIYGAG+ FAERLL QFN +++ +A KA++MY TKG + YRL D E
Sbjct: 944 EHAKIFNYGRIYGAGQPFAERLLMQFNHRLTQQEAAEKAQQMYAATKGLRWYRLSD-EGE 1002
Query: 683 ELIKRVYSKYE---------------AREVCSAYNTSVDKIFDKPQWYGGTESAMFNRLE 727
L++ + + RE ++ + W GGTES MFN+LE
Sbjct: 1003 WLVRELNLPVDRTEGGWISLQDLRKVQRETARKSQWKKWEVVAERAWKGGTESEMFNKLE 1062
Query: 728 EIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLVCMRWLVS 787
IATS P TP L C +SRALEP S +F+ +R+NWVVQS AVD+LHLMLV M+WL
Sbjct: 1063 SIATSDIPRTPVLGCCISRALEP-SAVQEEFMTSRVNWVVQSSAVDYLHLMLVAMKWLFE 1121
Query: 788 R---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIPLSISFFS 844
D RF ISIHDE+RYLV +E++Y ALAL +TNLLTR KL + D+P S++FFS
Sbjct: 1122 EFAIDGRFCISIHDEVRYLVREEDRYRAALALQITNLLTRCMFAYKLGLNDLPQSVAFFS 1181
Query: 845 GVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKANGVI 894
V+ID+ LRKE DCKTPSNP G+ + YGIP GE LDIYQ I+ G +
Sbjct: 1182 AVDIDRCLRKEVTMDCKTPSNPTGMERRYGIPQGEALDIYQIIELTKGSL 1231
>gi|1644239|dbj|BAA12223.1| mitochondrial DNA polymerase gamma [Homo sapiens]
Length = 1241
Score = 719 bits (1855), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/950 (42%), Positives = 539/950 (56%), Gaps = 126/950 (13%)
Query: 6 WTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLATFEV 65
W ++SS+NSL+EV++LY G L+K R +FV+G+++DI N+ +LM YCA+D AT
Sbjct: 349 WLDISSVNSLAEVHRLYVGGPPLEKEPRELFVKGTMKDIRENFQDLMQYCAQDVWATH-- 406
Query: 66 IQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLAGML 125
EV Q PLFLER PHPVTLAGML
Sbjct: 407 ------------------------------------EVFQQQLPLFLERCPHPVTLAGML 430
Query: 126 ELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDKYKDSLWLWDQ 185
E+ +YLPVN NW +Y E+ T+ +L EMK LMD + AC LL ++YK+ WLWD
Sbjct: 431 EMGVSYLPVNQNWERYLAEAQGTYEELQREMKKSLMDLANDACQLLSGERYKEDPWLWDL 490
Query: 186 DWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQT-------EDEFVK--RRREL 236
+W +++ K KK ++ P E + DQ E+EF + R
Sbjct: 491 EWDLQEFKQKKAKKVKKEPATASKLPIEGAGAPGDPMDQEDLGPCSEEEEFQQDVMARAC 550
Query: 237 VEKFKPLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAW 296
++K K T + LP +L G+P WYRKLC + + D AW
Sbjct: 551 LQKLK---GTTELLPKRPQHLPGHPGWYRKLCPR------------------LDDP--AW 587
Query: 297 IPGPSLISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTD--IKVPDAENI----- 349
PGPSL+S M++TPKL++LTW PLH+ HGWGYLVP D K+P +
Sbjct: 588 TPGPSLLSLQMRVTPKLMALTWDGFPLHYSERHGWGYLVPGRRDNLAKLPTGTTLESAGV 647
Query: 350 --PLEQLKQLY---------NNITKQDNCEAN----VDNAQ--------NSLRDSVETNI 386
P ++ LY + Q+ A DN+ + L E +
Sbjct: 648 VCPYRAIESLYRKHCLEQGKQQLMPQEAGLAEEFLLTDNSAIWQTVEELDYLEVEAEAKM 707
Query: 387 SFIDCSKSAKRLEVIANVLDKKKLAEASSTDTSTDDADTPREIGFIKLPHKDGEHLNVGN 446
+ + + L + A K + +D D P F KLPHKDG NVG+
Sbjct: 708 ENLRAAVPGQPLALTARGGPKDTQPSYHHGNGPYNDVDIP-GCWFFKLPHKDGNSCNVGS 766
Query: 447 PLSRDFINKFSDNSLAGVDIGAK--RIIEISRMLSYWRNNHERVKKQFVVWLNKKDLPRR 504
P ++DF+ K D +L GA R +EI++M+S+WRN H+R+ Q VVWL + LPR
Sbjct: 767 PFAKDFLPKMEDGTLQAGPGGASGPRALEINKMISFWRNAHKRISSQMVVWLPRSALPRA 826
Query: 505 LVE--NIESEGRDYGVILPQLIVSGTLTRRAVEATWMTASNAVGERVGSELRAMIQAPDG 562
++ + + EG YG ILPQ++ +GT+TRRAVE TW+TASNA +RVGSEL+AM+QAP G
Sbjct: 827 VIRHPDYDEEGL-YGAILPQVVTAGTITRRAVEPTWLTASNARPDRVGSELKAMVQAPPG 885
Query: 563 YSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMHSITAKAVGISR 622
Y+++GADVDSQELWIA+V+GD++ A HG T GWMTL G+KS TD+HS TA VGISR
Sbjct: 886 YTLVGADVDSQELWIAAVLGDAHFAGMHGCTAFGWMTLQGRKSRGTDLHSKTATTVGISR 945
Query: 623 EHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKGKKLYRLKDGHLE 682
EHAKI NY RIYGAG+ FAERLL QFN +++ +A KA++MY TKG + YRL D E
Sbjct: 946 EHAKIFNYGRIYGAGQPFAERLLMQFNHRLTQQEAAEKAQQMYAATKGLRWYRLSD-EGE 1004
Query: 683 ELIKRVYSKYE---------------AREVCSAYNTSVDKIFDKPQWYGGTESAMFNRLE 727
L++ + + RE ++ + W GGTES MFN+LE
Sbjct: 1005 WLVRELNLPVDRTEGGWISLQDLRKVQRETARKSQWKKWEVVAERAWKGGTESEMFNKLE 1064
Query: 728 EIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLVCMRWLVS 787
IATS P TP L C +SRALEP S +F+ +R+NWVVQS AVD+LHLMLV M+WL
Sbjct: 1065 SIATSDIPRTPVLGCCISRALEP-SAVQEEFMTSRVNWVVQSSAVDYLHLMLVAMKWLFE 1123
Query: 788 R---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIPLSISFFS 844
D RF ISIHDE+RYLV +E++Y ALAL +TNLLTR KL + D+P S++FFS
Sbjct: 1124 EFAIDGRFCISIHDEVRYLVREEDRYRAALALQITNLLTRCMFAYKLGLNDLPQSVAFFS 1183
Query: 845 GVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKANGVI 894
V+ID+ LRKE DCKTPSNP G+ + YGIP GE LDIYQ I+ G +
Sbjct: 1184 AVDIDRCLRKEVTMDCKTPSNPTGMERRYGIPQGEALDIYQIIELTKGSL 1233
>gi|311347844|gb|ADP90867.1| DNA polymerase subunit gamma-1 [Homo sapiens]
Length = 1239
Score = 719 bits (1855), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/950 (42%), Positives = 539/950 (56%), Gaps = 126/950 (13%)
Query: 6 WTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLATFEV 65
W ++SS+NSL+EV++LY G L+K R +FV+G+++DI N+ +LM YCA+D AT
Sbjct: 347 WLDISSVNSLAEVHRLYVGGPPLEKEPRELFVKGTMKDIRENFQDLMQYCAQDVWATH-- 404
Query: 66 IQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLAGML 125
EV Q PLFLER PHPVTLAGML
Sbjct: 405 ------------------------------------EVFQQQLPLFLERCPHPVTLAGML 428
Query: 126 ELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDKYKDSLWLWDQ 185
E+ +YLPVN NW +Y E+ T+ +L EMK LMD + AC LL ++YK+ WLWD
Sbjct: 429 EMGVSYLPVNQNWERYLAEAQGTYEELQREMKKSLMDLTNDACQLLSGERYKEDPWLWDL 488
Query: 186 DWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQT-------EDEFVK--RRREL 236
+W +++ K KK ++ P E + DQ E+EF + R
Sbjct: 489 EWDLQEFKQKKAKKVKKEPATASKLPIEGAGAPGDPMDQEDLGPCSEEEEFQQDVMARAC 548
Query: 237 VEKFKPLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAW 296
++K K T + LP +L G+P WYRKLC + + D AW
Sbjct: 549 LQKLK---GTTELLPKRPQHLPGHPGWYRKLCPR------------------LDDP--AW 585
Query: 297 IPGPSLISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTD--IKVPDAENI----- 349
PGPSL+S M++TPKL++LTW PLH+ HGWGYLVP D K+P +
Sbjct: 586 TPGPSLLSLQMRVTPKLMALTWDGFPLHYSERHGWGYLVPGRRDNLAKLPTGTTLESAGV 645
Query: 350 --PLEQLKQLY---------NNITKQDNCEAN----VDNAQ--------NSLRDSVETNI 386
P ++ LY + Q+ A DN+ + L E +
Sbjct: 646 VCPYRAIESLYRKHCLEQGKQQLMPQEAGLAEEFLLTDNSAIWQTVEELDYLEVEAEAKM 705
Query: 387 SFIDCSKSAKRLEVIANVLDKKKLAEASSTDTSTDDADTPREIGFIKLPHKDGEHLNVGN 446
+ + + L + A K + +D D P F KLPHKDG NVG+
Sbjct: 706 ENLRAAVPGQPLALTARGGPKDTQPSYHHGNGPYNDVDIP-GCWFFKLPHKDGNSCNVGS 764
Query: 447 PLSRDFINKFSDNSLAGVDIGAK--RIIEISRMLSYWRNNHERVKKQFVVWLNKKDLPRR 504
P ++DF+ K D +L GA R +EI++M+S+WRN H+R+ Q VVWL + LPR
Sbjct: 765 PFAKDFLPKMEDGTLQAGPGGASGPRALEINKMISFWRNAHKRISSQMVVWLPRSALPRA 824
Query: 505 LVE--NIESEGRDYGVILPQLIVSGTLTRRAVEATWMTASNAVGERVGSELRAMIQAPDG 562
++ + + EG YG ILPQ++ +GT+TRRAVE TW+TASNA +RVGSEL+AM+QAP G
Sbjct: 825 VIRHPDYDEEGL-YGAILPQVVTAGTITRRAVEPTWLTASNARPDRVGSELKAMVQAPPG 883
Query: 563 YSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMHSITAKAVGISR 622
Y+++GADVDSQELWIA+V+GD++ A HG T GWMTL G+KS TD+HS TA VGISR
Sbjct: 884 YTLVGADVDSQELWIAAVLGDAHFAGMHGCTAFGWMTLQGRKSRGTDLHSKTATTVGISR 943
Query: 623 EHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKGKKLYRLKDGHLE 682
EHAKI NY RIYGAG+ FAERLL QFN +++ +A KA++MY TKG + YRL D E
Sbjct: 944 EHAKIFNYGRIYGAGQPFAERLLMQFNHRLTQQEAAEKAQQMYAATKGLRWYRLSD-EGE 1002
Query: 683 ELIKRVYSKYE---------------AREVCSAYNTSVDKIFDKPQWYGGTESAMFNRLE 727
L++ + + RE ++ + W GGTES MFN+LE
Sbjct: 1003 WLVRELNLPVDRTEGGWISLQDLRKVQRETARKSQWKKWEVVAERAWKGGTESEMFNKLE 1062
Query: 728 EIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLVCMRWLVS 787
IATS P TP L C +SRALEP S +F+ +R+NWVVQS AVD+LHLMLV M+WL
Sbjct: 1063 SIATSDIPRTPVLGCCISRALEP-SAVQEEFMTSRVNWVVQSSAVDYLHLMLVAMKWLFE 1121
Query: 788 R---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIPLSISFFS 844
D RF ISIHDE+RYLV +E++Y ALAL +TNLLTR KL + D+P S++FFS
Sbjct: 1122 EFAIDGRFCISIHDEVRYLVREEDRYRAALALQITNLLTRCMFAYKLGLNDLPQSVAFFS 1181
Query: 845 GVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKANGVI 894
V+ID+ LRKE DCKTPSNP G+ + YGIP GE LDIYQ I+ G +
Sbjct: 1182 AVDIDRCLRKEVTMDCKTPSNPTGMERRYGIPQGEALDIYQIIELTKGSL 1231
>gi|74226616|dbj|BAE21732.1| unnamed protein product [Mus musculus]
Length = 1217
Score = 718 bits (1854), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/946 (43%), Positives = 540/946 (57%), Gaps = 122/946 (12%)
Query: 6 WTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLATFEV 65
W ++SS N+L++V+ LY G L+K R +FV+GS+ DI N+ +LM YCA+D AT
Sbjct: 329 WMDISSANNLADVHNLYVGGPPLEKEPRELFVKGSMRDIRENFQDLMQYCARDVWAT--- 385
Query: 66 IQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLAGML 125
FEV Q PLFLER PHPVTLAGML
Sbjct: 386 -----------------------------------FEVFQQQLPLFLERCPHPVTLAGML 410
Query: 126 ELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDKYKDSLWLWDQ 185
E+ +YLPVN NW +Y E+ T+ +L EMK LMD + AC LL ++YK+ WLWD
Sbjct: 411 EMGVSYLPVNQNWERYLTEAQNTYEELQREMKKSLMDLANDACQLLSGERYKEDPWLWDL 470
Query: 186 DWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQ------TEDEFVKRRRELVEK 239
+W +++ K KK ++ P E + DQ +E+E ++R +
Sbjct: 471 EWDLQEFKQKKAKKVKKPAS-ASKLPIEGAGPFGDPMDQEDPGPPSEEEELQRSVTAHNR 529
Query: 240 FKPLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIPG 299
+ L T D LP +L G+P WYRKLC + + D AW PG
Sbjct: 530 LQQLRSTTDLLPKRPQHLPGHPGWYRKLCPR------------------LDDP--AWAPG 569
Query: 300 PSLISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTD-IKVPD--------AENIP 350
PSL+S M++TPKL++LTW PLH+ HGWGYLVP D + P A P
Sbjct: 570 PSLLSLQMRVTPKLMALTWDGFPLHYSDSHGWGYLVPGRRDNLTEPPVSPTVESAAVTCP 629
Query: 351 LEQLKQLYNNIT----KQDNCEANVDNAQ-------NSLRDSVETNISFIDCSKSAKR-- 397
++ LY KQ VD A+ +++ +VE + +D AK
Sbjct: 630 YRAIESLYRKHCLEQGKQQLEPQEVDLAEEFLLTDSSAMWQTVE-ELGCLDVEAEAKMEN 688
Query: 398 ------LEVIANVLDKKKLAEASSTDTSTDDADTPREIGFIKLPHKDGEHLNVGNPLSRD 451
L + A K + +D + P F KLPHKDG + NVG+P ++D
Sbjct: 689 SGLSQPLVLPAACAPKSSQPTYHHGNGPYNDVNIP-GCWFFKLPHKDGNNYNVGSPFAKD 747
Query: 452 FINKFSDNSLAGVDIGAK--RIIEISRMLSYWRNNHERVKKQFVVWLNKKDLPRRLVEN- 508
F+ K D +L GA R +EI++M+S+WRN H+R+ Q VVWL + LPR + +
Sbjct: 748 FLPKMEDGTLQAGPGGASGPRALEINKMISFWRNAHKRISSQMVVWLPRSALPRVVTRHP 807
Query: 509 -IESEGRDYGVILPQLIVSGTLTRRAVEATWMTASNAVGERVGSELRAMIQAPDGYSIIG 567
+ EG YG ILPQ++ +GT+TRRAVE TW+TASNA +RVGSEL+AM+QAP GY ++G
Sbjct: 808 SFDEEGH-YGAILPQVVTAGTITRRAVEPTWLTASNARPDRVGSELKAMVQAPPGYVLVG 866
Query: 568 ADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMHSITAKAVGISREHAKI 627
ADVDSQELWIA+V+GD++ A HG T GWMTL G+KS TD+HS TA VGISREHAKI
Sbjct: 867 ADVDSQELWIAAVLGDAHFAGMHGCTAFGWMTLQGRKSRGTDLHSKTAATVGISREHAKI 926
Query: 628 INYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKGKKLYRLK-DGHLEELIK 686
NY RIYGAG+ FAERLL QFN +++ +A KA++MY +TKG + YRL DG E L+K
Sbjct: 927 FNYGRIYGAGQSFAERLLMQFNHRLTRQEAAEKAQQMYAVTKGLRRYRLSADG--EWLVK 984
Query: 687 RVYSKYE---------------AREVCSAYNTSVDKIFDKPQWYGGTESAMFNRLEEIAT 731
++ + RE ++ + W GGTES MFN+LE IA
Sbjct: 985 QLNLPVDRTEDGWVSLQDLRMIQREASRKSRWKKWEVASERAWTGGTESEMFNKLESIAM 1044
Query: 732 SLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLVCMRWLVSR--- 788
S P TP L C +SRALEP S +FI +R+NWVVQS AVD+LHLMLV M+WL
Sbjct: 1045 SDTPRTPVLGCCISRALEP-SVVQGEFITSRVNWVVQSSAVDYLHLMLVAMKWLFEEFAI 1103
Query: 789 DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIPLSISFFSGVEI 848
D RF ISIHDE+RYLV +E++Y ALAL +TNLLTR KL + D+P S++FFS V+I
Sbjct: 1104 DGRFCISIHDEVRYLVREEDRYRAALALQITNLLTRCMFAYKLGLNDLPQSVAFFSAVDI 1163
Query: 849 DKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKANGVI 894
D+ LRKE DCKTPSNP G+ + YGIP GE LDIYQ I+ G +
Sbjct: 1164 DQCLRKEVTMDCKTPSNPTGMERRYGIPQGEALDIYQIIELTKGSL 1209
>gi|87080815|ref|NP_059490.2| DNA polymerase subunit gamma-1 [Mus musculus]
gi|37537265|dbj|BAC98463.1| polymerase (DNA directed), gamma [Mus musculus]
Length = 1217
Score = 718 bits (1854), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/946 (43%), Positives = 540/946 (57%), Gaps = 122/946 (12%)
Query: 6 WTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLATFEV 65
W ++SS N+L++V+ LY G L+K R +FV+GS+ DI N+ +LM YCA+D AT
Sbjct: 329 WMDISSANNLADVHNLYVGGPPLEKEPRELFVKGSMRDIRENFQDLMQYCARDVWAT--- 385
Query: 66 IQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLAGML 125
FEV Q PLFLER PHPVTLAGML
Sbjct: 386 -----------------------------------FEVFQQQLPLFLERCPHPVTLAGML 410
Query: 126 ELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDKYKDSLWLWDQ 185
E+ +YLPVN NW +Y E+ T+ +L EMK LMD + AC LL ++YK+ WLWD
Sbjct: 411 EMGVSYLPVNQNWERYLTEAQNTYEELQREMKKSLMDLANDACQLLSGERYKEDPWLWDL 470
Query: 186 DWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQ------TEDEFVKRRRELVEK 239
+W +++ K KK ++ P E + DQ +E+E ++R +
Sbjct: 471 EWDLQEFKQKKAKKVKKPAS-ASKLPIEGAGPFGDPMDQEDPGPPSEEEELQRSVTAHNR 529
Query: 240 FKPLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIPG 299
+ L T D LP +L G+P WYRKLC + + D AW PG
Sbjct: 530 LQQLRSTTDLLPKRPQHLPGHPGWYRKLCPR------------------LDDP--AWAPG 569
Query: 300 PSLISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTD-IKVPD--------AENIP 350
PSL+S M++TPKL++LTW PLH+ HGWGYLVP D + P A P
Sbjct: 570 PSLLSLQMRVTPKLMALTWDGFPLHYSDSHGWGYLVPGRRDNLTEPPVSPTVESAAVTCP 629
Query: 351 LEQLKQLYNNIT----KQDNCEANVDNAQ-------NSLRDSVETNISFIDCSKSAKR-- 397
++ LY KQ VD A+ +++ +VE + +D AK
Sbjct: 630 YRAIESLYRKHCLEQGKQQLEPQEVDLAEEFLLTDSSAMWQTVE-ELGCLDVEAEAKMEN 688
Query: 398 ------LEVIANVLDKKKLAEASSTDTSTDDADTPREIGFIKLPHKDGEHLNVGNPLSRD 451
L + A K + +D + P F KLPHKDG + NVG+P ++D
Sbjct: 689 SGLSQPLVLPAACAPKSSQPTYHHGNGPYNDVNIP-GCWFFKLPHKDGNNYNVGSPFAKD 747
Query: 452 FINKFSDNSLAGVDIGAK--RIIEISRMLSYWRNNHERVKKQFVVWLNKKDLPRRLVEN- 508
F+ K D +L GA R +EI++M+S+WRN H+R+ Q VVWL + LPR + +
Sbjct: 748 FLPKMEDGTLQAGPGGASGPRALEINKMISFWRNAHKRISSQMVVWLPRSALPRVVTRHP 807
Query: 509 -IESEGRDYGVILPQLIVSGTLTRRAVEATWMTASNAVGERVGSELRAMIQAPDGYSIIG 567
+ EG YG ILPQ++ +GT+TRRAVE TW+TASNA +RVGSEL+AM+QAP GY ++G
Sbjct: 808 SFDEEGH-YGAILPQVVTAGTITRRAVEPTWLTASNARPDRVGSELKAMVQAPPGYVLVG 866
Query: 568 ADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMHSITAKAVGISREHAKI 627
ADVDSQELWIA+V+GD++ A HG T GWMTL G+KS TD+HS TA VGISREHAKI
Sbjct: 867 ADVDSQELWIAAVLGDAHFAGMHGCTAFGWMTLQGRKSRGTDLHSKTAATVGISREHAKI 926
Query: 628 INYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKGKKLYRLK-DGHLEELIK 686
NY RIYGAG+ FAERLL QFN +++ +A KA++MY +TKG + YRL DG E L+K
Sbjct: 927 FNYGRIYGAGQSFAERLLMQFNHRLTRQEAAEKAQQMYAVTKGLRRYRLSADG--EWLVK 984
Query: 687 RVYSKYE---------------AREVCSAYNTSVDKIFDKPQWYGGTESAMFNRLEEIAT 731
++ + RE ++ + W GGTES MFN+LE IA
Sbjct: 985 QLNLPVDRTEDGWVSLQDLRMIRREASRKSRWKKWEVASERAWTGGTESEMFNKLESIAM 1044
Query: 732 SLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLVCMRWLVSR--- 788
S P TP L C +SRALEP S +FI +R+NWVVQS AVD+LHLMLV M+WL
Sbjct: 1045 SDTPRTPVLGCCISRALEP-SVVQGEFITSRVNWVVQSSAVDYLHLMLVAMKWLFEEFAI 1103
Query: 789 DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIPLSISFFSGVEI 848
D RF ISIHDE+RYLV +E++Y ALAL +TNLLTR KL + D+P S++FFS V+I
Sbjct: 1104 DGRFCISIHDEVRYLVREEDRYRAALALQITNLLTRCMFAYKLGLNDLPQSVAFFSAVDI 1163
Query: 849 DKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKANGVI 894
D+ LRKE DCKTPSNP G+ + YGIP GE LDIYQ I+ G +
Sbjct: 1164 DQCLRKEVTMDCKTPSNPTGMERRYGIPQGEALDIYQIIELTKGSL 1209
>gi|444722097|gb|ELW62800.1| DNA polymerase subunit gamma-1 [Tupaia chinensis]
Length = 1204
Score = 717 bits (1850), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/949 (42%), Positives = 544/949 (57%), Gaps = 119/949 (12%)
Query: 6 WTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLATFEV 65
W ++SS+NSL+EV+KLY G L+K R +F+ GS++DI N+ +LM YCA+D AT E
Sbjct: 313 WLDISSVNSLAEVHKLYVGGPPLEKEPRELFIRGSMKDIRENFQDLMQYCAQDVWATQEG 372
Query: 66 IQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLAGML 125
L+ + AL +F R PHPVTLAGML
Sbjct: 373 SNLLW-------------------------------SFMTAL--VFAPRCPHPVTLAGML 399
Query: 126 ELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDKYKDSLWLWDQ 185
E+ +YLPVN NW +Y E+ T+ +L EMK LMD ++AC LL ++YK+ WLWD
Sbjct: 400 EMGVSYLPVNQNWERYLTEAQSTYEELQREMKKSLMDLANEACQLLSGERYKEDPWLWDL 459
Query: 186 DWSVKDLKLKKKANKTLSVD-------QETEEPEEFYEINKNGEDQTEDEFVKRRRELVE 238
+W +++ K KK K +E P + + G E+EF +RE+
Sbjct: 460 EWDLQEFKQKKAKVKKKEPAAAAKLPIEEGGAPGDPMDQEDPGPPSEEEEF---QREVTA 516
Query: 239 K--FKPLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAW 296
+ + L T + LP + +L G+P WYRKLC + + D AW
Sbjct: 517 RACLQQLKGTTELLPKRAQHLPGHPGWYRKLCPR------------------LDDP--AW 556
Query: 297 IPGPSLISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTD--IKVPDAEN------ 348
PGPSL+S M++TPKL++LTW PLH+ HGWGYLVP D +KVP
Sbjct: 557 TPGPSLLSLQMRVTPKLMALTWDGFPLHYSERHGWGYLVPGRRDNLVKVPAGTTPESAGV 616
Query: 349 -IPLEQLKQLYN----NITKQDNCEANVDNAQNSL---RDSVETNISFIDCSKS---AKR 397
P ++ LY + KQ A+ L ++ + + CS++ A
Sbjct: 617 TCPYRAIESLYRKHRLDRGKQQLEPQGAGVAEEFLLTDSSAMWQTVEELGCSEAEAEATM 676
Query: 398 LEVIANVLDKKKLAEASSTDTST-----------DDADTPREIGFIKLPHKDGEHLNVGN 446
+ V D+ A+ ++ +D D P F KLPHKDG NVG+
Sbjct: 677 ETLRTAVPDQPPTLTATGGPKASQPAYHHGNGPYNDVDIP-GCWFFKLPHKDGNSYNVGS 735
Query: 447 PLSRDFINKFSDNSLAGVDIGAK--RIIEISRMLSYWRNNHERVKKQFVVWLNKKDLPRR 504
P ++DF+ K D +L GA R +EI++M+S+WRN H+R+ Q VVWL + LPR
Sbjct: 736 PFAKDFLPKMEDGTLQAGPGGASGPRALEINKMISFWRNAHKRISSQMVVWLPRSALPRA 795
Query: 505 LVEN--IESEGRDYGVILPQLIVSGTLTRRAVEATWMTASNAVGERVGSELRAMIQAPDG 562
+ + + EGR YG ILPQ++ +GT+TRRAVE TW+TASNA +RVGSEL+AM+QAP G
Sbjct: 796 VTRHPSFDEEGR-YGAILPQVVTAGTITRRAVEPTWLTASNARPDRVGSELKAMVQAPPG 854
Query: 563 YSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMHSITAKAVGISR 622
Y ++GADVDSQELWIA+V+GD++ A HG T GWMTL G+KS TD+HS TA VGISR
Sbjct: 855 YVLVGADVDSQELWIAAVLGDAHFAGMHGCTAFGWMTLQGRKSRGTDLHSKTATTVGISR 914
Query: 623 EHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKGKKLYRLKD---- 678
EHAK+ NY RIYGAG+ FAERLL QFN +++ +A KA++MY +TKG + YRL D
Sbjct: 915 EHAKVFNYGRIYGAGQPFAERLLMQFNHRLTRQEAAEKAQQMYAVTKGLRRYRLSDEGEW 974
Query: 679 --GHLEELIKRVYSKYEA--------REVCSAYNTSVDKIFDKPQWYGGTESAMFNRLEE 728
L+ + R + + RE ++ + W GGTES MFN+LE
Sbjct: 975 LVRELDLTVDRTEDGWVSLQDLRKIQREASRKSRWKKWEVAAERAWMGGTESEMFNKLES 1034
Query: 729 IATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLVCMRWLVSR 788
IA S P TP L CR+SRALEP S +F+ +R+NWVVQS AVD+LHLMLV M+WL
Sbjct: 1035 IAMSDTPRTPVLGCRISRALEP-SAVQGEFMTSRVNWVVQSSAVDYLHLMLVAMKWLFEE 1093
Query: 789 ---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIPLSISFFSG 845
D RF ISIHDE+RYLV E++Y ALAL +TNLLTR KL + D+P S++FFS
Sbjct: 1094 FAIDGRFCISIHDEVRYLVRAEDRYRAALALQITNLLTRCMFAYKLGLNDLPQSVAFFSA 1153
Query: 846 VEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKANGVI 894
V+ID+ LRKE DCKTPSNP G+ + YGIP GE LDIYQ I+ G +
Sbjct: 1154 VDIDQCLRKEVTMDCKTPSNPTGMERRYGIPQGEALDIYQIIELTKGSL 1202
>gi|311347878|gb|ADP90884.1| DNA polymerase subunit gamma-1 [Homo sapiens]
Length = 1239
Score = 717 bits (1850), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/950 (42%), Positives = 538/950 (56%), Gaps = 126/950 (13%)
Query: 6 WTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLATFEV 65
W ++SS+NSL+EV++LY G L+K R +FV+G+++DI N+ +LM YCA+D AT
Sbjct: 347 WLDISSVNSLAEVHRLYVGGPPLEKEPRELFVKGTMKDIRENFQDLMQYCAQDVWATH-- 404
Query: 66 IQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLAGML 125
EV Q PLFLER PHPVTLAGML
Sbjct: 405 ------------------------------------EVFQQQLPLFLERCPHPVTLAGML 428
Query: 126 ELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDKYKDSLWLWDQ 185
E+ +YLPVN NW +Y E+ T+ +L EMK LMD + AC LL ++YK+ WLWD
Sbjct: 429 EMGVSYLPVNQNWERYLAEAQGTYEELQREMKKSLMDLANDACQLLSGERYKEDPWLWDL 488
Query: 186 DWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQT-------EDEFVK--RRREL 236
+W +++ K KK ++ P E + DQ E+EF + R
Sbjct: 489 EWDLQEFKQKKAKKVKKEPATASKLPIEGAGAPGDPMDQEDLGPCSEEEEFQQDVMARAC 548
Query: 237 VEKFKPLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAW 296
++K K T + LP +L G+P WYRKLC + + D AW
Sbjct: 549 LQKLK---GTTELLPKRPQHLPGHPGWYRKLCPR------------------LDDP--AW 585
Query: 297 IPGPSLISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTD--IKVPDAENI----- 349
PGPSL+S M++TPKL++LTW PLH+ HGWGYLVP D K+P +
Sbjct: 586 TPGPSLLSLQMRVTPKLMALTWDGFPLHYSERHGWGYLVPGRRDNLAKLPTGTTLESAGV 645
Query: 350 --PLEQLKQLY---------NNITKQDNCEAN----VDNAQ--------NSLRDSVETNI 386
P ++ LY + Q+ A DN+ + L E +
Sbjct: 646 VCPYRAIESLYRKHCLEQGKQQLMPQEAGLAEEFLLTDNSAIWQTVEELDYLEVEAEAKM 705
Query: 387 SFIDCSKSAKRLEVIANVLDKKKLAEASSTDTSTDDADTPREIGFIKLPHKDGEHLNVGN 446
+ + + L + A K + +D D P F KLPHKDG NVG+
Sbjct: 706 ENLRAAVPGQPLALTARGGPKDTQPSYHHGNGPYNDVDIP-GCWFFKLPHKDGNSCNVGS 764
Query: 447 PLSRDFINKFSDNSLAGVDIGAK--RIIEISRMLSYWRNNHERVKKQFVVWLNKKDLPRR 504
P ++DF+ K D +L GA R +EI++M+S+WRN H+R+ Q VVWL + LPR
Sbjct: 765 PFAKDFLPKMEDGTLQAGPGGASGPRALEINKMISFWRNAHKRISSQMVVWLPRSALPRA 824
Query: 505 LVE--NIESEGRDYGVILPQLIVSGTLTRRAVEATWMTASNAVGERVGSELRAMIQAPDG 562
++ + + EG YG ILPQ++ +GT+TRRAVE TW+TASNA +RVGSEL+AM+QAP G
Sbjct: 825 VIRHPDYDEEGL-YGAILPQVVTAGTITRRAVEPTWLTASNARPDRVGSELKAMVQAPPG 883
Query: 563 YSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMHSITAKAVGISR 622
Y+++GADVDSQELWIA+V+GD++ A HG T GWMTL G+KS TD+HS TA VGISR
Sbjct: 884 YTLVGADVDSQELWIAAVLGDAHFAGMHGCTAFGWMTLQGRKSRGTDLHSKTATTVGISR 943
Query: 623 EHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKGKKLYRLKDGHLE 682
EHAKI NY RIYGAG+ FAERLL QFN +++ +A KA++MY TKG + YRL D E
Sbjct: 944 EHAKIFNYGRIYGAGQPFAERLLMQFNHRLTQQEAAEKAQQMYAATKGLRWYRLSD-EGE 1002
Query: 683 ELIKRVYSKYE---------------AREVCSAYNTSVDKIFDKPQWYGGTESAMFNRLE 727
L++ + + RE ++ + W GGTES MFN+LE
Sbjct: 1003 WLVRELNLPVDRTEGGWISLQDLRKVQRETARKSQWKKWEVVAERAWKGGTESEMFNKLE 1062
Query: 728 EIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLVCMRWLVS 787
IATS P TP L C +SRALEP S +F+ +R+NWVVQS AVD+LHLMLV M+WL
Sbjct: 1063 SIATSDIPRTPVLGCCISRALEP-SAVQEEFMTSRVNWVVQSSAVDYLHLMLVAMKWLFE 1121
Query: 788 R---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIPLSISFFS 844
D RF ISIHDE+RYLV +E+ Y ALAL +TNLLTR KL + D+P S++FFS
Sbjct: 1122 EFAIDGRFCISIHDEVRYLVREEDCYRAALALQITNLLTRCMFAYKLGLNDLPQSVAFFS 1181
Query: 845 GVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKANGVI 894
V+ID+ LRKE DCKTPSNP G+ + YGIP GE LDIYQ I+ G +
Sbjct: 1182 AVDIDRCLRKEVTMDCKTPSNPTGMERRYGIPQGEALDIYQIIELTKGSL 1231
>gi|311347852|gb|ADP90871.1| DNA polymerase subunit gamma-1 [Homo sapiens]
Length = 1239
Score = 716 bits (1849), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/950 (42%), Positives = 538/950 (56%), Gaps = 126/950 (13%)
Query: 6 WTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLATFEV 65
W ++SS+NSL+EV++LY G L+K R +FV+G+++DI N+ +LM YCA+D AT
Sbjct: 347 WLDISSVNSLAEVHRLYVGGPPLEKEPRELFVKGTMKDIRENFQDLMQYCAQDVWATH-- 404
Query: 66 IQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLAGML 125
EV Q PLFLER PHPVTLAGML
Sbjct: 405 ------------------------------------EVFQQQLPLFLERCPHPVTLAGML 428
Query: 126 ELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDKYKDSLWLWDQ 185
E+ +YLPVN NW +Y E+ T+ +L EMK LMD + AC LL ++YK+ WLWD
Sbjct: 429 EMGVSYLPVNQNWERYLAEAQGTYEELQREMKKSLMDLANDACQLLSGERYKEDPWLWDL 488
Query: 186 DWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQT-------EDEFVK--RRREL 236
+W +++ K KK ++ P E + DQ E+EF + R
Sbjct: 489 EWDLQEFKQKKAKKVKKEPATASKLPIEGAGAPGDPMDQEDLGPCSEEEEFQQDVMARAC 548
Query: 237 VEKFKPLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAW 296
++K K T + LP +L G+P WYRKLC + + D AW
Sbjct: 549 LQKLK---GTTELLPKRPQHLPGHPGWYRKLCPR------------------LDDP--AW 585
Query: 297 IPGPSLISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTD--IKVPDAENI----- 349
PGPSL+S M++TPKL++LTW PLH+ HGWGYLVP D K+P +
Sbjct: 586 TPGPSLLSLQMRVTPKLMALTWDGFPLHYSERHGWGYLVPGRRDNLAKLPTGTTLESAGV 645
Query: 350 --PLEQLKQLY---------NNITKQDNCEAN----VDNAQ--------NSLRDSVETNI 386
P ++ LY + Q+ A DN+ + L E +
Sbjct: 646 VCPYRAIESLYRKHCLEQGKQQLMPQEAGLAEEFLLTDNSAIWQTVEELDYLEVEAEAKM 705
Query: 387 SFIDCSKSAKRLEVIANVLDKKKLAEASSTDTSTDDADTPREIGFIKLPHKDGEHLNVGN 446
+ + + L + A K + +D D P F KLPHKDG NVG+
Sbjct: 706 ENLRAAVPGQPLALTARGGPKDTQPSYHHGNGPYNDVDIP-GCWFFKLPHKDGNSCNVGS 764
Query: 447 PLSRDFINKFSDNSLAGVDIGAK--RIIEISRMLSYWRNNHERVKKQFVVWLNKKDLPRR 504
P ++DF+ K D +L GA R +EI++M+S+WRN H+R+ Q VVWL + LPR
Sbjct: 765 PFAKDFLPKMEDGTLQAGPGGASGPRALEINKMISFWRNAHKRISSQMVVWLPRSALPRA 824
Query: 505 LVE--NIESEGRDYGVILPQLIVSGTLTRRAVEATWMTASNAVGERVGSELRAMIQAPDG 562
++ + + EG YG ILPQ++ +GT+TRRAVE TW+TASNA +RVGSEL+AM+QAP G
Sbjct: 825 VIRHPDYDEEGL-YGAILPQVVTAGTITRRAVEPTWLTASNARPDRVGSELKAMVQAPPG 883
Query: 563 YSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMHSITAKAVGISR 622
Y+++GADVDSQELWIA+V+GD++ A HG T GWMTL G+KS TD+HS TA VGISR
Sbjct: 884 YTLVGADVDSQELWIAAVLGDAHFAGMHGCTAFGWMTLQGRKSRGTDLHSKTATTVGISR 943
Query: 623 EHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKGKKLYRLKDGHLE 682
EHAKI NY RIYGAG+ FAERLL QFN +++ +A KA++MY TKG + YRL D E
Sbjct: 944 EHAKIFNYGRIYGAGQPFAERLLMQFNHRLTQQEAAEKAQQMYAATKGLRWYRLSD-EGE 1002
Query: 683 ELIKRVYSKYE---------------AREVCSAYNTSVDKIFDKPQWYGGTESAMFNRLE 727
L++ + + RE ++ + W GGTES MFN+LE
Sbjct: 1003 WLVRELNLPVDRTEGGWISLQDLRKVQRETARKSQWKKWEVVAERAWKGGTESEMFNKLE 1062
Query: 728 EIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLVCMRWLVS 787
IATS P TP L C +SRALEP S +F+ + +NWVVQS AVD+LHLMLV M+WL
Sbjct: 1063 SIATSDIPRTPVLGCCISRALEP-SAVQEEFMTSHVNWVVQSSAVDYLHLMLVAMKWLFE 1121
Query: 788 R---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIPLSISFFS 844
D RF ISIHDE+RYLV +E++Y ALAL +TNLLTR KL + D+P S++FFS
Sbjct: 1122 EFAIDGRFCISIHDEVRYLVREEDRYRAALALQITNLLTRCMFAYKLGLNDLPQSVAFFS 1181
Query: 845 GVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKANGVI 894
V+ID+ LRKE DCKTPSNP G+ + YGIP GE LDIYQ I+ G +
Sbjct: 1182 AVDIDRCLRKEVTMDCKTPSNPTGMERRYGIPQGEALDIYQIIELTKGSL 1231
>gi|74195213|dbj|BAE28339.1| unnamed protein product [Mus musculus]
Length = 1217
Score = 716 bits (1849), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/946 (43%), Positives = 539/946 (56%), Gaps = 122/946 (12%)
Query: 6 WTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLATFEV 65
W ++SS N+L++V+ LY G L+K R +FV+GS+ DI N+ +LM YCA+D AT
Sbjct: 329 WMDISSANNLADVHNLYVGGPPLEKEPRELFVKGSMRDIRENFQDLMQYCARDVWAT--- 385
Query: 66 IQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLAGML 125
FEV Q PLFLER PHPV LAGML
Sbjct: 386 -----------------------------------FEVFQQQLPLFLERCPHPVALAGML 410
Query: 126 ELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDKYKDSLWLWDQ 185
E+ +YLPVN NW +Y E+ T+ +L EMK LMD + AC LL ++YK+ WLWD
Sbjct: 411 EMGVSYLPVNQNWERYLTEAQNTYEELQREMKKSLMDLANDACQLLSGERYKEDPWLWDL 470
Query: 186 DWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQ------TEDEFVKRRRELVEK 239
+W +++ K KK ++ P E + DQ +E+E ++R +
Sbjct: 471 EWDLQEFKQKKAKKVKKPAS-ASKLPIEGAGPFGDPMDQEDPGPPSEEEELQRSVTAHNR 529
Query: 240 FKPLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIPG 299
+ L T D LP +L G+P WYRKLC + + D AW PG
Sbjct: 530 LQQLRSTTDLLPKRPQHLPGHPGWYRKLCPR------------------LDDP--AWAPG 569
Query: 300 PSLISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTD-IKVPD--------AENIP 350
PSL+S M++TPKL++LTW PLH+ HGWGYLVP D + P A P
Sbjct: 570 PSLLSLQMRVTPKLMALTWDGFPLHYSDSHGWGYLVPGRRDNLTEPPVSPTVESAAVTCP 629
Query: 351 LEQLKQLYNNIT----KQDNCEANVDNAQ-------NSLRDSVETNISFIDCSKSAKR-- 397
++ LY KQ VD A+ +++ +VE + +D AK
Sbjct: 630 YRTIESLYRKHCLEQGKQQLEPQEVDLAEEFLLTDSSAMWQTVE-ELGCLDVEAEAKMEN 688
Query: 398 ------LEVIANVLDKKKLAEASSTDTSTDDADTPREIGFIKLPHKDGEHLNVGNPLSRD 451
L + A K + +D + P F KLPHKDG + NVG+P ++D
Sbjct: 689 SGLSQPLVLPAACAPKSSQPTYHHGNGPYNDVNIP-GCWFFKLPHKDGNNYNVGSPFAKD 747
Query: 452 FINKFSDNSLAGVDIGAK--RIIEISRMLSYWRNNHERVKKQFVVWLNKKDLPRRLVEN- 508
F+ K D +L GA R +EI++M+S+WRN H+R+ Q VVWL + LPR + +
Sbjct: 748 FLPKMEDGTLQAGPGGASGPRALEINKMISFWRNAHKRISSQMVVWLPRSALPRVVTRHP 807
Query: 509 -IESEGRDYGVILPQLIVSGTLTRRAVEATWMTASNAVGERVGSELRAMIQAPDGYSIIG 567
+ EG YG ILPQ++ +GT+TRRAVE TW+TASNA +RVGSEL+AM+QAP GY ++G
Sbjct: 808 SFDEEGH-YGAILPQVVTAGTITRRAVEPTWLTASNARPDRVGSELKAMVQAPPGYVLVG 866
Query: 568 ADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMHSITAKAVGISREHAKI 627
ADVDSQELWIA+V+GD++ A HG T GWMTL G+KS TD+HS TA VGISREHAKI
Sbjct: 867 ADVDSQELWIAAVLGDAHFAGMHGCTAFGWMTLQGRKSRGTDLHSKTAATVGISREHAKI 926
Query: 628 INYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKGKKLYRLK-DGHLEELIK 686
NY RIYGAG+ FAERLL QFN +++ +A KA++MY +TKG + YRL DG E L+K
Sbjct: 927 FNYGRIYGAGQSFAERLLMQFNHRLTRQEAAEKAQQMYAVTKGLRRYRLSADG--EWLVK 984
Query: 687 RVYSKYE---------------AREVCSAYNTSVDKIFDKPQWYGGTESAMFNRLEEIAT 731
++ + RE ++ + W GGTES MFN+LE IA
Sbjct: 985 QLNLPVDRTEDGWVSLQDLRMIRREASRKSRWKKWEVASERAWTGGTESEMFNKLESIAM 1044
Query: 732 SLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLVCMRWLVSR--- 788
S P TP L C +SRALEP S +FI +R+NWVVQS AVD+LHLMLV M+WL
Sbjct: 1045 SDTPRTPVLGCCISRALEP-SVVQGEFITSRVNWVVQSSAVDYLHLMLVAMKWLFEEFAI 1103
Query: 789 DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIPLSISFFSGVEI 848
D RF ISIHDE+RYLV +E++Y ALAL +TNLLTR KL + D+P S++FFS V+I
Sbjct: 1104 DGRFCISIHDEVRYLVREEDRYHAALALQITNLLTRCMFAYKLGLNDLPQSVAFFSAVDI 1163
Query: 849 DKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKANGVI 894
D+ LRKE DCKTPSNP G+ + YGIP GE LDIYQ I+ G +
Sbjct: 1164 DQCLRKEVTMDCKTPSNPTGMERRYGIPQGEALDIYQIIELTKGSL 1209
>gi|17365997|sp|Q9QYV8.1|DPOG1_RAT RecName: Full=DNA polymerase subunit gamma-1; AltName:
Full=Mitochondrial DNA polymerase catalytic subunit;
AltName: Full=PolG-alpha
gi|5912568|emb|CAB56206.1| DNA polymerase gamma [Rattus norvegicus]
gi|149057256|gb|EDM08579.1| polymerase (DNA directed), gamma, isoform CRA_a [Rattus norvegicus]
gi|149057257|gb|EDM08580.1| polymerase (DNA directed), gamma, isoform CRA_a [Rattus norvegicus]
Length = 1216
Score = 714 bits (1844), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/941 (43%), Positives = 539/941 (57%), Gaps = 113/941 (12%)
Query: 6 WTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLATFEV 65
W ++SS N+L++V+ LY G L K R +FV+GS+ DI N+ +LM YCA+D AT
Sbjct: 329 WMDISSANNLADVHNLYVGGPRLAKEPRELFVKGSMRDIRENFQDLMEYCARDVWAT--- 385
Query: 66 IQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLAGML 125
FEV Q PLFLER PHPVTLAGML
Sbjct: 386 -----------------------------------FEVFQQQLPLFLERCPHPVTLAGML 410
Query: 126 ELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDKYKDSLWLWDQ 185
E+ +YLPVN NW +Y E+ T+ +L EMK LM+ + AC LL ++YK+ WLWD
Sbjct: 411 EMGVSYLPVNQNWERYLTEAQSTYEELQREMKKSLMELANDACQLLSGERYKEDPWLWDL 470
Query: 186 DWSVKDLKLKKKANK--TLSVDQETEEPEEFYEINKNGEDQ---TEDEFVKRRRELVEKF 240
+W +++ K KK T S + E + + ED +E+E +++ +
Sbjct: 471 EWDLQEFKQKKAKKVKKTASASKLPIEGAGPFGDPMDQEDPGPPSEEEELQQNIMAHTRL 530
Query: 241 KPLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIPGP 300
+ L T D LP +L G+P WYRKLC + + D AW PGP
Sbjct: 531 QQLKSTTDLLPKRPQHLPGHPGWYRKLCPR------------------LDDP--AWTPGP 570
Query: 301 SLISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYS----TDIKVPDAE-----NIPL 351
SL+S M++TPKL++LTW PLH+ HGWGYLVP T++ V E P
Sbjct: 571 SLLSLQMRVTPKLMALTWDGFPLHYSDSHGWGYLVPGRRDNLTELPVSPTEESAAVTCPY 630
Query: 352 EQLKQLYN----NITKQDNCEANVDNAQNSL--RDSVETNISFIDCSKSAKRLEVIANVL 405
++ LY + KQ D A+ L ++ + + C V ++ L
Sbjct: 631 RAIESLYRRHCLDQGKQQLETQETDLAEEFLLTDSAMWQTVEELGCLDVEAEATVESSGL 690
Query: 406 DKKKL---AEASSTDTST--------DDADTPREIGFIKLPHKDGEHLNVGNPLSRDFIN 454
+ + A A T T +D D P F KLPHKDG + NVG+P ++DF+
Sbjct: 691 SQPLVPPTACAPKTSQPTYHHGNGPYNDVDIP-GCWFFKLPHKDGNNYNVGSPFAKDFLP 749
Query: 455 KFSDNSLAGVDIGAK--RIIEISRMLSYWRNNHERVKKQFVVWLNKKDLPRRLVENIE-S 511
K D +L GA+ R +EI++M+S+WRN H+R+ Q VVWL + LPR + +
Sbjct: 750 KMEDGTLQAGPGGARGPRALEINKMISFWRNAHKRISSQMVVWLPRSALPRAVTRHPSFD 809
Query: 512 EGRDYGVILPQLIVSGTLTRRAVEATWMTASNAVGERVGSELRAMIQAPDGYSIIGADVD 571
E YG ILPQ++ +GT+TRRAVE TW+TASNA +RVGSEL+AM+QAP GY ++GADVD
Sbjct: 810 EESHYGAILPQVVTAGTITRRAVEPTWLTASNARPDRVGSELKAMVQAPPGYVLVGADVD 869
Query: 572 SQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMHSITAKAVGISREHAKIINYA 631
SQELWIA+V+GD++ A HG T GWMTL G+KS TD+HS TA VGISREHAK+ NY
Sbjct: 870 SQELWIAAVLGDAHFAGMHGCTAFGWMTLQGRKSRGTDLHSKTAATVGISREHAKVFNYG 929
Query: 632 RIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKGKKLYRLKDGHLEELIKRVYSK 691
RIYGAG+ FAERLL QFN +S+ +A KA++MY +TKG + YRL D E L+K++
Sbjct: 930 RIYGAGQSFAERLLMQFNHRLSRQEAADKAQQMYAVTKGLRRYRLSDDG-EWLVKQLNVP 988
Query: 692 YE---------------AREVCSAYNTSVDKIFDKPQWYGGTESAMFNRLEEIATSLQPV 736
+ RE ++ + W GGTES MFN+LE IA S P
Sbjct: 989 VDRTEDGWVSLQDLRKIRREASRKSRWKKWEVVTERAWTGGTESEMFNKLESIAMSDTPR 1048
Query: 737 TPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLVCMRWLVSR---DTRFV 793
TP L C +SRALEP S +F+ +R+NWVVQS AVD+LHLMLV M+WL D RF
Sbjct: 1049 TPVLGCCISRALEP-SVVQGEFMTSRVNWVVQSSAVDYLHLMLVAMKWLFEEFAIDGRFC 1107
Query: 794 ISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIPLSISFFSGVEIDKVLR 853
ISIHDE+RYLV +E++Y ALAL +TNLLTR KL + D+P S++FFS V+ID+ LR
Sbjct: 1108 ISIHDEVRYLVREEDRYRAALALQITNLLTRCMFAYKLGLNDLPQSVAFFSAVDIDQCLR 1167
Query: 854 KESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKANGVI 894
KE DCKTPSNP G+ + YGIP GE LDIYQ I+ G +
Sbjct: 1168 KEVTMDCKTPSNPTGMERKYGIPQGEALDIYQIIELTKGSL 1208
>gi|16758292|ref|NP_445980.1| DNA polymerase subunit gamma-1 [Rattus norvegicus]
gi|5912570|emb|CAB56207.1| DNA polymerase gamma [Rattus norvegicus]
Length = 1216
Score = 714 bits (1844), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/941 (43%), Positives = 539/941 (57%), Gaps = 113/941 (12%)
Query: 6 WTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLATFEV 65
W ++SS N+L++V+ LY G L K R +FV+GS+ DI N+ +LM YCA+D AT
Sbjct: 329 WMDISSANNLADVHNLYVGGPRLAKEPRELFVKGSMRDIRENFQDLMEYCARDVWAT--- 385
Query: 66 IQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLAGML 125
FEV Q PLFLER PHPVTLAGML
Sbjct: 386 -----------------------------------FEVFQQQLPLFLERCPHPVTLAGML 410
Query: 126 ELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDKYKDSLWLWDQ 185
E+ +YLPVN NW +Y E+ T+ +L EMK LM+ + AC LL ++YK+ WLWD
Sbjct: 411 EMGVSYLPVNQNWERYLTEAQSTYEELQREMKKSLMELANDACQLLSGERYKEDPWLWDL 470
Query: 186 DWSVKDLKLKKKANK--TLSVDQETEEPEEFYEINKNGEDQ---TEDEFVKRRRELVEKF 240
+W +++ K KK T S + E + + ED +E+E +++ +
Sbjct: 471 EWDLQEFKQKKAKKVKKTASASKLPIEGAGPFGDPMDQEDPGPPSEEEELQQNIMAHTRL 530
Query: 241 KPLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIPGP 300
+ L T D LP +L G+P WYRKLC + + D AW PGP
Sbjct: 531 QQLKSTTDLLPKRPQHLPGHPGWYRKLCPR------------------LDDP--AWTPGP 570
Query: 301 SLISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYS----TDIKVPDAE-----NIPL 351
SL+S M++TPKL++LTW PLH+ HGWGYLVP T++ V E P
Sbjct: 571 SLLSLQMRVTPKLMALTWDGFPLHYSDSHGWGYLVPGRRDNLTELPVSPTEESAAVTCPY 630
Query: 352 EQLKQLYN----NITKQDNCEANVDNAQNSL--RDSVETNISFIDCSKSAKRLEVIANVL 405
++ LY + KQ D A+ L ++ + + C V ++ L
Sbjct: 631 RAIESLYRRHCLDQGKQQLETQETDLAEEFLLTDSAMWQTVEELGCLDVEAEATVESSGL 690
Query: 406 DKKKL---AEASSTDTST--------DDADTPREIGFIKLPHKDGEHLNVGNPLSRDFIN 454
+ + A A T T +D D P F KLPHKDG + NVG+P ++DF+
Sbjct: 691 SQPLVPPTACAPKTSQPTYHHGNGPYNDVDIP-GCWFFKLPHKDGNNYNVGSPFAKDFLP 749
Query: 455 KFSDNSLAGVDIGAK--RIIEISRMLSYWRNNHERVKKQFVVWLNKKDLPRRLVENIE-S 511
K D +L GA+ R +EI++M+S+WRN H+R+ Q VVWL + LPR + +
Sbjct: 750 KMEDGTLQAGPGGARGPRALEINKMISFWRNAHKRISSQMVVWLPRSALPRAVTRHPSFD 809
Query: 512 EGRDYGVILPQLIVSGTLTRRAVEATWMTASNAVGERVGSELRAMIQAPDGYSIIGADVD 571
E YG ILPQ++ +GT+TRRAVE TW+TASNA +RVGSEL+AM+QAP GY ++GADVD
Sbjct: 810 EESHYGAILPQVVTAGTITRRAVEPTWLTASNARPDRVGSELKAMVQAPPGYVLVGADVD 869
Query: 572 SQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMHSITAKAVGISREHAKIINYA 631
SQELWIA+V+GD++ A HG T GWMTL G+KS TD+HS TA VGISREHAK+ NY
Sbjct: 870 SQELWIAAVLGDAHFAGMHGCTAFGWMTLQGRKSRGTDLHSKTAATVGISREHAKVFNYG 929
Query: 632 RIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKGKKLYRLKDGHLEELIKRVYSK 691
RIYGAG+ FAERLL QFN +S+ +A KA++MY +TKG + YRL D E L+K++
Sbjct: 930 RIYGAGQSFAERLLMQFNHRLSRQEAADKAQQMYAVTKGLRRYRLSDDG-EWLVKQLNVP 988
Query: 692 YE---------------AREVCSAYNTSVDKIFDKPQWYGGTESAMFNRLEEIATSLQPV 736
+ RE ++ + W GGTES MFN+LE IA S P
Sbjct: 989 VDRTEDGWVSLQDLRKIRREASRKSRWKKWEVVTERAWTGGTESEMFNKLESIAMSDTPR 1048
Query: 737 TPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLVCMRWLVSR---DTRFV 793
TP L C +SRALEP S +F+ +R+NWVVQS AVD+LHLMLV M+WL D RF
Sbjct: 1049 TPVLGCCISRALEP-SVVQGEFMTSRVNWVVQSSAVDYLHLMLVAMKWLFEEFAIDGRFC 1107
Query: 794 ISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIPLSISFFSGVEIDKVLR 853
ISIHDE+RYLV +E++Y ALAL +TNLLTR KL + D+P S++FFS V+ID+ LR
Sbjct: 1108 ISIHDEVRYLVREEDRYRAALALQITNLLTRCMFAYKLGLNDLPQSVAFFSAVDIDQCLR 1167
Query: 854 KESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKANGVI 894
KE DCKTPSNP G+ + YGIP GE LDIYQ I+ G +
Sbjct: 1168 KEVTMDCKTPSNPTGMERKYGIPQGEALDIYQIIELTKGSL 1208
>gi|17380447|sp|P54099.2|DPOG1_MOUSE RecName: Full=DNA polymerase subunit gamma-1; AltName:
Full=Mitochondrial DNA polymerase catalytic subunit;
AltName: Full=PolG-alpha
gi|9082197|gb|AAF82772.1|AF268975_1 mitochondrial DNA polymerase gamma [Mus musculus]
Length = 1239
Score = 714 bits (1842), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/943 (43%), Positives = 535/943 (56%), Gaps = 120/943 (12%)
Query: 8 NVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLATFEVIQ 67
++SS N+L++V+ LY G L+K R +FV+GS+ DI N+ +LM YCA+D AT
Sbjct: 332 DISSANNLADVHNLYVGGPPLEKEPRELFVKGSMRDIRENFQDLMQYCARDVWAT----- 386
Query: 68 ALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLAGMLEL 127
FEV Q PLFLER PHPVTLAGMLE+
Sbjct: 387 ---------------------------------FEVFQQQLPLFLERCPHPVTLAGMLEM 413
Query: 128 STAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDKYKDSLWLWDQDW 187
+YLPVN NW +Y E+ T+ +L EMK LMD + AC LL ++YK+ WLWD +W
Sbjct: 414 GVSYLPVNQNWERYLTEAQNTYEELQREMKKSLMDLANDACQLLSGERYKEDPWLWDLEW 473
Query: 188 SVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQ------TEDEFVKRRRELVEKFK 241
+++ K KK ++ P E + DQ +E+E ++R + +
Sbjct: 474 DLQEFKQKKAKKVKKPAS-ASKLPIEGAGPFGDPMDQEDPGPPSEEEELQRSVTAHNRLQ 532
Query: 242 PLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIPGPS 301
L T D LP +L G+P WYR+LC + + D AW PGPS
Sbjct: 533 QLRSTTDLLPKRPQHLPGHPGWYRQLCPR------------------LDDP--AWAPGPS 572
Query: 302 LISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTD-IKVPD--------AENIPLE 352
L+S M++TPKL++LTW PLH+ HGWGYLVP D + P A P
Sbjct: 573 LLSLQMRVTPKLMALTWDGFPLHYSDSHGWGYLVPGRRDNLTEPPVSPTVESAAVTCPYR 632
Query: 353 QLKQLYNNIT----KQDNCEANVDNAQ------NSLRDSVETNISFIDCSKSAKR----- 397
++ LY KQ VD A+ NS + +D AK
Sbjct: 633 AIESLYRKHCLEQGKQQLEPQEVDLAEEFLLTDNSAMWQTVEELGCLDVEAEAKMENSGL 692
Query: 398 ---LEVIANVLDKKKLAEASSTDTSTDDADTPREIGFIKLPHKDGEHLNVGNPLSRDFIN 454
L + A K + +D + P F KLPHKDG + NVG+P ++DF+
Sbjct: 693 SQPLVLPAACAPKSSQPTYHHGNGPYNDVNIP-GCWFFKLPHKDGNNYNVGSPFAKDFLP 751
Query: 455 KFSDNSLAGVDIGAK--RIIEISRMLSYWRNNHERVKKQFVVWLNKKDLPRRLVEN--IE 510
K D +L GA R +EI++M+S+WRN H+R+ Q VVWL + LPR + + +
Sbjct: 752 KMEDGTLQAGPGGASGPRALEINKMISFWRNAHKRISSQMVVWLPRSALPRVVTRHPAFD 811
Query: 511 SEGRDYGVILPQLIVSGTLTRRAVEATWMTASNAVGERVGSELRAMIQAPDGYSIIGADV 570
EG YG ILPQ++ +GT+TRRAVE TW+TASNA +RVGSEL+AM+QAP GY ++GADV
Sbjct: 812 EEGH-YGAILPQVVTAGTITRRAVEPTWLTASNARPDRVGSELKAMVQAPPGYVLVGADV 870
Query: 571 DSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMHSITAKAVGISREHAKIINY 630
DSQELWIA+V+GD++ A HG T GWMTL G+KS TD+HS TA VGISREHAKI NY
Sbjct: 871 DSQELWIAAVLGDAHFAGMHGCTAFGWMTLQGRKSRGTDLHSKTAATVGISREHAKIFNY 930
Query: 631 ARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKGKKLYRLK-DGHLEELIKRVY 689
RIYGAG+ FAERLL QFN +++ +A KA++MY +TKG + YRL DG E L+K++
Sbjct: 931 GRIYGAGQSFAERLLMQFNHRLTRQEAAEKAQQMYAVTKGLRRYRLSADG--EWLVKQLN 988
Query: 690 SKYE---------------AREVCSAYNTSVDKIFDKPQWYGGTESAMFNRLEEIATSLQ 734
+ RE ++ + W GGTES MFN+LE IA S
Sbjct: 989 LPVDRTEDGWVSLQDLRMIRREASRKSRWKKWEVAAERAWTGGTESEMFNKLESIAMSDT 1048
Query: 735 PVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLVCMRWLVSR---DTR 791
P TP L C +SRALEP S +FI +R+NWVVQS AVD+LHLMLV M+WL D R
Sbjct: 1049 PRTPVLGCCISRALEP-SVVQGEFITSRVNWVVQSSAVDYLHLMLVAMKWLFEEFAIDGR 1107
Query: 792 FVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIPLSISFFSGVEIDKV 851
F ISIHDE+RYLV +E++Y ALAL +TNLLTR KL + D+P S++FFS V+ID+
Sbjct: 1108 FCISIHDEVRYLVREEDRYRAALALQITNLLTRCMFAYKLGLNDLPQSVAFFSAVDIDQC 1167
Query: 852 LRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKANGVI 894
LRKE DCKTPSNP G+ + YGIP GE LDIYQ I+ G +
Sbjct: 1168 LRKEVTMDCKTPSNPTGMERRYGIPQGEALDIYQIIELTKGSL 1210
>gi|301768381|ref|XP_002919612.1| PREDICTED: LOW QUALITY PROTEIN: DNA polymerase subunit gamma-1-like
[Ailuropoda melanoleuca]
Length = 1227
Score = 714 bits (1842), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/967 (41%), Positives = 536/967 (55%), Gaps = 154/967 (15%)
Query: 6 WTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLATFEV 65
W ++SS+N+L++V+ LY G L+K R +FV GS++DI N+ +LM YCA+D AT
Sbjct: 335 WLDISSVNNLADVHGLYVGGPPLEKEPRELFVRGSMKDIRENFQDLMQYCAQDVWAT--- 391
Query: 66 IQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLAGML 125
+EV Q PLFLER PHPVTLAGML
Sbjct: 392 -----------------------------------YEVFQQQLPLFLERCPHPVTLAGML 416
Query: 126 ELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDKYKDSLWLWDQ 185
E+ +YLPVN NW +Y E+ T+ +L EMK LMD + AC LL +YK+ WLWD
Sbjct: 417 EMGVSYLPVNQNWERYLVEAQSTYEELQREMKKSLMDLANDACQLLSGQRYKEDPWLWDL 476
Query: 186 DWSVKD-------------------LKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTE 226
+W +++ L ++ DQE P E+ ++G
Sbjct: 477 EWDLQEFKQKKAKKVKRKEPTAASKLPIEGAGAPGDPKDQEDPGPPSEEEVQRDG----- 531
Query: 227 DEFVKRRRELVEKFKPLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIH 286
R +E K T + LP +L G+P WYRKLC +
Sbjct: 532 -----MARACLEHLK---GTAEVLPKRPQHLPGHPGWYRKLCPR---------------- 567
Query: 287 DGISDTSEAWIPGPSLISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTD-IKVPD 345
+ D AW PGPSL+S M++TPKL+++TW PLH+ HGWGYLVP D +
Sbjct: 568 --LDDP--AWTPGPSLLSLQMRVTPKLMAMTWDGFPLHYSERHGWGYLVPGRRDNLAQAP 623
Query: 346 AENIP--------------------LEQLKQLYNNITKQDNCEANVDNAQNSLRDSVE-- 383
AE P LEQ KQ + + E + +++ +VE
Sbjct: 624 AETAPASAGVACPYRAIESLYRKHCLEQGKQ-HPEPQQAGLAEEFLLTDGSTMWQTVEEL 682
Query: 384 -----------TNISFIDCSKSA---KRLEVIANVLDKKKLAEASSTDTSTDDADTPREI 429
+ +C A + L + A K + +D D P
Sbjct: 683 GCLEVEAEVEAEAEARAECCGEAVPGQPLALTAAGGPKASQPAYHHGNGPYNDVDVP-GC 741
Query: 430 GFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAK--RIIEISRMLSYWRNNHER 487
F KLPHKDG NVG+P ++DF+ K D +L GA R +EI++M+S+WRN H+R
Sbjct: 742 WFFKLPHKDGSSCNVGSPFAKDFLPKMEDGTLQAGPGGASGPRALEINKMISFWRNAHKR 801
Query: 488 VKKQFVVWLNKKDLPRRLVE--NIESEGRDYGVILPQLIVSGTLTRRAVEATWMTASNAV 545
+ Q VVWL + LPR + + + EGR YG ILPQ++ +GT+TRRAVE TW+TASNA
Sbjct: 802 ISSQMVVWLPRSALPRAVTRHPDYDEEGR-YGAILPQVVTAGTITRRAVEPTWLTASNAR 860
Query: 546 GERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKS 605
+RVGSEL+AM+QAP GY ++GADVDSQELWIA+V+GD++ A+ HG T GWMTL G+KS
Sbjct: 861 PDRVGSELKAMVQAPPGYVLVGADVDSQELWIAAVLGDAHFARMHGCTAFGWMTLQGRKS 920
Query: 606 NATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMY 665
TD+HS TA VGISREHAKI NY RIYGAG+ FAERLL QFN +++ +A KA++MY
Sbjct: 921 RGTDLHSKTAATVGISREHAKIFNYGRIYGAGQPFAERLLMQFNHRLTRQEAAEKAQQMY 980
Query: 666 TLTKGKKLYRLKDGHLEELIKRVYSKYE---------------AREVCSAYNTSVDKIFD 710
+TKG + YRL D E L++ ++ + RE ++
Sbjct: 981 AVTKGLRRYRLSD-EGEWLVRELHLPVDRTEDGWVSLQDLRKIQREASRKSRWKKWEVVA 1039
Query: 711 KPQWYGGTESAMFNRLEEIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSG 770
+ W GGTES MFN+LE IA S P TP L CR+SRALEP S +F+ +R+NWVVQS
Sbjct: 1040 ERAWMGGTESEMFNKLESIAMSDTPCTPVLGCRISRALEP-SAVQGEFMTSRVNWVVQSS 1098
Query: 771 AVDFLHLMLVCMRWLVSR---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFC 827
AVD+LHLMLV M+WL D RF ISIHDE+RYLV +E++Y ALAL +TNLLTR
Sbjct: 1099 AVDYLHLMLVAMKWLFEEFAIDGRFCISIHDEVRYLVREEDRYRAALALQITNLLTRCMF 1158
Query: 828 IKKLDMTDIPLSISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTI 887
KL + D+P S++FFS V+ID+ LRKE DCKTPSNP G+ + YGIP GE LDIYQ I
Sbjct: 1159 AYKLGLNDLPQSVAFFSTVDIDQCLRKEVTMDCKTPSNPTGMERRYGIPQGEALDIYQII 1218
Query: 888 DKANGVI 894
+ G +
Sbjct: 1219 ELTKGSL 1225
>gi|262368015|pdb|3IKM|A Chain A, Crystal Structure Of Human Mitochondrial Dna Polymerase
Holoenzyme
gi|262368018|pdb|3IKM|D Chain D, Crystal Structure Of Human Mitochondrial Dna Polymerase
Holoenzyme
Length = 1172
Score = 713 bits (1841), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/952 (42%), Positives = 539/952 (56%), Gaps = 128/952 (13%)
Query: 6 WTNVSSLNS--LSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLATF 63
W ++SS+NS L+EV++LY G L+K R +FV+G+++DI N+ +LM YCA+D AT
Sbjct: 278 WLDISSVNSNSLAEVHRLYVGGPPLEKEPRELFVKGTMKDIRENFQDLMQYCAQDVWATH 337
Query: 64 EVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLAG 123
EV Q PLFLER PHPVTLAG
Sbjct: 338 --------------------------------------EVFQQQLPLFLERCPHPVTLAG 359
Query: 124 MLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDKYKDSLWLW 183
MLE+ +YLPVN NW +Y E+ T+ +L EMK LMD + AC LL ++YK+ WLW
Sbjct: 360 MLEMGVSYLPVNQNWERYLAEAQGTYEELQREMKKSLMDLANDACQLLSGERYKEDPWLW 419
Query: 184 DQDWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQT-------EDEFVK--RRR 234
D +W +++ K KK ++ P E + DQ E+EF + R
Sbjct: 420 DLEWDLQEFKQKKAKKVKKEPATASKLPIEGAGAPGDPMDQEDLGPCSEEEEFQQDVMAR 479
Query: 235 ELVEKFKPLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSE 294
++K K T + LP +L G+P WYRKLC + + D
Sbjct: 480 ACLQKLK---GTTELLPKRPQHLPGHPGWYRKLCPR------------------LDDP-- 516
Query: 295 AWIPGPSLISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTD--IKVPDAENI--- 349
AW PGPSL+S M++TPKL++LTW PLH+ HGWGYLVP D K+P +
Sbjct: 517 AWTPGPSLLSLQMRVTPKLMALTWDGFPLHYSERHGWGYLVPGRRDNLAKLPTGTTLESA 576
Query: 350 ----PLEQLKQLY---------NNITKQDNCEAN----VDNAQ--------NSLRDSVET 384
P ++ LY + Q+ A DN+ + L E
Sbjct: 577 GVVCPYRAIESLYRKHCLEQGKQQLMPQEAGLAEEFLLTDNSAIWQTVEELDYLEVEAEA 636
Query: 385 NISFIDCSKSAKRLEVIANVLDKKKLAEASSTDTSTDDADTPREIGFIKLPHKDGEHLNV 444
+ + + + L + A K + +D D P F KLPHKDG NV
Sbjct: 637 KMENLRAAVPGQPLALTARGGPKDTQPSYHHGNGPYNDVDIP-GCWFFKLPHKDGNSCNV 695
Query: 445 GNPLSRDFINKFSDNSLAGVDIGAK--RIIEISRMLSYWRNNHERVKKQFVVWLNKKDLP 502
G+P ++DF+ K D +L GA R +EI++M+S+WRN H+R+ Q VVWL + LP
Sbjct: 696 GSPFAKDFLPKMEDGTLQAGPGGASGPRALEINKMISFWRNAHKRISSQMVVWLPRSALP 755
Query: 503 RRLVE--NIESEGRDYGVILPQLIVSGTLTRRAVEATWMTASNAVGERVGSELRAMIQAP 560
R ++ + + EG YG ILPQ++ +GT+TRRAVE TW+TASNA +RVGSEL+AM+QAP
Sbjct: 756 RAVIRHPDYDEEGL-YGAILPQVVTAGTITRRAVEPTWLTASNARPDRVGSELKAMVQAP 814
Query: 561 DGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMHSITAKAVGI 620
GY+++GADVDSQELWIA+V+GD++ A HG T GWMTL G+KS TD+HS TA VGI
Sbjct: 815 PGYTLVGADVDSQELWIAAVLGDAHFAGMHGCTAFGWMTLQGRKSRGTDLHSKTATTVGI 874
Query: 621 SREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKGKKLYRLKDGH 680
SREHAKI NY RIYGAG+ FAERLL QFN +++ +A KA++MY TKG + YRL D
Sbjct: 875 SREHAKIFNYGRIYGAGQPFAERLLMQFNHRLTQQEAAEKAQQMYAATKGLRWYRLSD-E 933
Query: 681 LEELIKRVYSKYE---------------AREVCSAYNTSVDKIFDKPQWYGGTESAMFNR 725
E L++ + + RE ++ + W GGTES MFN+
Sbjct: 934 GEWLVRELNLPVDRTEGGWISLQDLRKVQRETARKSQWKKWEVVAERAWKGGTESEMFNK 993
Query: 726 LEEIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLVCMRWL 785
LE IATS P TP L C +SRALEP S +F+ +R+NWVVQS AVD+LHLMLV M+WL
Sbjct: 994 LESIATSDIPRTPVLGCCISRALEP-SAVQEEFMTSRVNWVVQSSAVDYLHLMLVAMKWL 1052
Query: 786 VSR---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIPLSISF 842
D RF ISIHDE+RYLV +E++Y ALAL +TNLLTR KL + D+P S++F
Sbjct: 1053 FEEFAIDGRFCISIHDEVRYLVREEDRYRAALALQITNLLTRCMFAYKLGLNDLPQSVAF 1112
Query: 843 FSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKANGVI 894
FS V+ID+ LRKE DCKTPSNP G+ + YGIP GE LDIYQ I+ G +
Sbjct: 1113 FSAVDIDRCLRKEVTMDCKTPSNPTGMERRYGIPQGEALDIYQIIELTKGSL 1164
>gi|363737592|ref|XP_425079.3| PREDICTED: DNA polymerase subunit gamma-1 [Gallus gallus]
Length = 956
Score = 707 bits (1825), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/960 (40%), Positives = 538/960 (56%), Gaps = 141/960 (14%)
Query: 6 WTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLATFEV 65
W +VSS+N+L++V+ LY G+ L K R +FV+G++ D+ NN+ LM+YCA D AT
Sbjct: 64 WVHVSSINNLADVHALYVGGEPLQKEARELFVKGTMADVRNNFQELMSYCASDVRAT--- 120
Query: 66 IQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLAGML 125
+EV Q PLF+ER PHPVT AGML
Sbjct: 121 -----------------------------------YEVFQEQLPLFMERCPHPVTFAGML 145
Query: 126 ELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDKYKDSLWLWDQ 185
E+ +YLPVN+NW +Y +++ T+ +L EMK LM+ + AC LLH+D+YK+ WLWD
Sbjct: 146 EMGVSYLPVNSNWRRYLDDAQGTYEELQKEMKKSLMNLANDACQLLHEDRYKEDPWLWDL 205
Query: 186 DWSVKDLKLKKKANKTL--SVDQETEEPEEFYE------INKNGEDQTEDEFVKRRRELV 237
+W ++ K KK A + ++ E E + ++ G E+E R E
Sbjct: 206 EWDTQEFKQKKPAKRKKDQKINSEASETGRWAGGLQPSVLSDPGPPSEEEEL--RAPESS 263
Query: 238 EKFKPLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWI 297
+ L +T P +L G+P WYRKLC + E W+
Sbjct: 264 TCLERLKETITLQPKRLQHLPGHPGWYRKLCPRLE--------------------EEGWV 303
Query: 298 PGPSLISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTD-----IKVPDAENIPLE 352
PGPSLIS M++TPKL+ L W PLH+ HGWGYLVP D P+ P
Sbjct: 304 PGPSLISLQMRVTPKLMRLAWDGFPLHYSEKHGWGYLVPGRQDNLPAASAEPEGPVCPHR 363
Query: 353 QLKQLYNNITKQDNCEANVDNAQNSLRDSVETNISFIDCSKSAKRLEVIANV-LDKKKLA 411
+++LY Q E + A VE + ++ S +++E ++ + LD ++
Sbjct: 364 AIERLYRQHCLQRGQEQPPEEA------GVEDELMVLEGSSMWQKVEELSQLELDMERPG 417
Query: 412 EASSTDTST----------------------------------DDADTPREIGFIKLPHK 437
A + + +D + P F KLPHK
Sbjct: 418 RAEQSQITVPGLTSRCHLQDEDGLPELVEESSQPSFHHGNGPYNDVNIP-GCWFFKLPHK 476
Query: 438 DGEHLNVGNPLSRDFINKFSDNSLAGVDIG---AKRIIEISRMLSYWRNNHERVKKQFVV 494
DG NVG+P ++DF+ + D +L +G R +EI++M+S+WRN H+RV Q VV
Sbjct: 477 DGNENNVGSPFAKDFLPRMEDGTLRAT-VGRTHGTRALEINKMVSFWRNAHKRVSSQVVV 535
Query: 495 WLNKKDLPRRLVEN-IESEGRDYGVILPQLIVSGTLTRRAVEATWMTASNAVGERVGSEL 553
WL K +LPR + + SE DYG ILPQ++ +GT+TRRAVE TW+TASNA +RVGSEL
Sbjct: 536 WLKKGELPRAVTRHPAYSEEEDYGAILPQVVTAGTITRRAVEPTWLTASNARADRVGSEL 595
Query: 554 RAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMHSI 613
+AM+Q P GYS++GADVDSQELWIA+V+G+++ A HG T GWMTL G+KS+ TD+HS
Sbjct: 596 KAMVQVPPGYSLVGADVDSQELWIAAVLGEAHFAGMHGCTAFGWMTLQGKKSDGTDLHSK 655
Query: 614 TAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKGKKL 673
TA VGISREHAK+ NY RIYGAG+ FAERLL QFN +++ A+ KA++MY +TKG +
Sbjct: 656 TAATVGISREHAKVFNYGRIYGAGQPFAERLLMQFNHRLTQQQAREKAQQMYAVTKGIRR 715
Query: 674 YRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKP----------------QWYGG 717
+ L + E L+K + + E + V KI + W GG
Sbjct: 716 FHLSE-EGEWLVKELELAVDKAEDGTVSAQDVQKIQREAMRKSRRKKKWDVVAHRMWAGG 774
Query: 718 TESAMFNRLEEIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHL 777
TES MFN+LE IA S P TP L C +SRALEP +F+ +R+NWVVQS AVD+LHL
Sbjct: 775 TESEMFNKLESIALSASPQTPVLGCHISRALEPAVA-KGEFLTSRVNWVVQSSAVDYLHL 833
Query: 778 MLVCMRWLVSR---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMT 834
MLV M+WL + RF ISIHDE+RYLV ++++Y ALAL +TNLLTR KL +
Sbjct: 834 MLVSMKWLFEEYDINGRFCISIHDEVRYLVQEQDRYRAALALQITNLLTRCMFAYKLGLQ 893
Query: 835 DIPLSISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKANGVI 894
D+P S++FFS V+ID+ LRKE +C TPSNP G+ K YGIP GE LDIYQ I+ G +
Sbjct: 894 DLPQSVAFFSAVDIDRCLRKEVTMNCATPSNPTGMEKKYGIPRGEALDIYQIIEITKGSL 953
>gi|344284368|ref|XP_003413940.1| PREDICTED: DNA polymerase subunit gamma-1 [Loxodonta africana]
Length = 1225
Score = 706 bits (1823), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/959 (41%), Positives = 535/959 (55%), Gaps = 142/959 (14%)
Query: 6 WTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLATFEV 65
W +SS+N+L++V+ LY G L+K R +FV+GS++DI N+ +LM YCA+D AT
Sbjct: 331 WLGISSVNNLADVHSLYVGGPPLEKEPRELFVKGSMKDIRENFQDLMQYCAQDVWAT--- 387
Query: 66 IQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLAGML 125
+EV Q PLFLER PHPVTLAGML
Sbjct: 388 -----------------------------------YEVFQQQLPLFLERCPHPVTLAGML 412
Query: 126 ELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDKYKDSLWLWDQ 185
E+ YLPVN NW +Y E+ T+ +L EMK LMD + AC LL ++YK+ WLWD
Sbjct: 413 EMGVPYLPVNQNWERYLAEAHSTYEELQREMKKSLMDLANDACQLLSGERYKEDPWLWDL 472
Query: 186 DWSVKDL-----------------KLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDE 228
+W +++ KL ++ E+P E ++ D
Sbjct: 473 EWDLQEFKQKKAKKVKKKEPATASKLPTTGAGAPGDPKDQEDPGPPSEEEESERDAAA-- 530
Query: 229 FVKRRRELVEKFKPLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDG 288
R +++ K T + LP +L G+P WYRKLC +
Sbjct: 531 -----RACLQQLK---GTIELLPKRPQHLPGHPGWYRKLCPR------------------ 564
Query: 289 ISDTSEAWIPGPSLISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTD--IKVPDA 346
+ D AW PGPSL+S M++TPKL++LTW PLH+ HGWGYLVP D KVP
Sbjct: 565 LDDP--AWTPGPSLLSLQMRVTPKLMALTWDGFPLHYSEQHGWGYLVPGRRDNLAKVPVG 622
Query: 347 ENI-------PLEQLKQLYN-NITKQDNCEANVDNA----------QNSLRDSVETNISF 388
+ P ++ LY + +Q + A +++ ++VE +
Sbjct: 623 TALASAGVACPYRAIESLYRKHCLEQGKQQPEPQEAGLAEEFLLTDNSTMWETVE-ELGC 681
Query: 389 IDCSKSAKRLEVIANVLDKKKLAEASSTDTST-------------DDADTPREIGFIKLP 435
++ AK A V + + S T ST +D D P F KLP
Sbjct: 682 LELEAEAKMENCQAAVPGQPSVL-VSRTAPSTVSQPTFHHGNGPYNDVDVP-GCWFFKLP 739
Query: 436 HKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAK--RIIEISRMLSYWRNNHERVKKQFV 493
HKDG NVG+P ++DF+ D +L GA R +EI++M+S+WRN H+R+ Q V
Sbjct: 740 HKDGNSCNVGSPFAKDFLPMMEDGTLQAGPGGASGPRALEINKMISFWRNAHKRISSQMV 799
Query: 494 VWLNKKDLPRRLVENIE-SEGRDYGVILPQLIVSGTLTRRAVEATWMTASNAVGERVGSE 552
VWL + LPR + + + E YG ILPQ++ +GT+TRRAVE TW+TASNA +RVGSE
Sbjct: 800 VWLPRSALPRAVTRHPDYDEEGHYGAILPQVVTAGTITRRAVEPTWLTASNARPDRVGSE 859
Query: 553 LRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMHS 612
L+AM+QAP GY ++GADVDSQELWIA+V+GD++ A HG T GWMTL G+KS TD+HS
Sbjct: 860 LKAMVQAPPGYVLVGADVDSQELWIAAVLGDAHFAGMHGCTAFGWMTLQGRKSRGTDLHS 919
Query: 613 ITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKGKK 672
TA VGISREHAKI NY RIYGAG+ FAERLL QFN +++ A KA++MY +TKG +
Sbjct: 920 KTAATVGISREHAKIFNYGRIYGAGQPFAERLLMQFNHRLTQEAAAEKAQQMYAVTKGLR 979
Query: 673 LYRLKD------GHLEELIKRVYSKYEA--------REVCSAYNTSVDKIFDKPQWYGGT 718
YRL D L+ + R + + RE ++ + W GGT
Sbjct: 980 RYRLTDEGEWLVRELDLPVDRTEDGWVSLQDLRKIQREASRKSRRKKWEVVAERAWTGGT 1039
Query: 719 ESAMFNRLEEIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLM 778
ES MFN+LE IATS P TP L CR+SRALEP S +F+ +R+NWVVQS AVD+LHLM
Sbjct: 1040 ESEMFNKLESIATSDTPRTPVLGCRISRALEP-SAVQGEFMTSRVNWVVQSSAVDYLHLM 1098
Query: 779 LVCMRWLVSR---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTD 835
LV M+WL D RF ISIHDE+RYLV +E++Y ALAL VTNLLTR KL + D
Sbjct: 1099 LVAMKWLFEEFGIDGRFCISIHDEVRYLVREEDRYRAALALQVTNLLTRCMFAYKLGLND 1158
Query: 836 IPLSISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKANGVI 894
+P S++FFS V+ID+ LRKE DCKTPSNP G+ + Y IP GE LDIYQ I+ G +
Sbjct: 1159 LPQSVAFFSAVDIDQCLRKEVTMDCKTPSNPTGMERRYRIPQGEALDIYQIIELTKGSL 1217
>gi|281341789|gb|EFB17373.1| hypothetical protein PANDA_008249 [Ailuropoda melanoleuca]
Length = 1214
Score = 702 bits (1812), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/971 (41%), Positives = 534/971 (54%), Gaps = 158/971 (16%)
Query: 6 WTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLATFEV 65
W ++SS+N+L++V+ LY G L+K R +FV GS++DI N+ +LM YCA+D AT
Sbjct: 319 WLDISSVNNLADVHGLYVGGPPLEKEPRELFVRGSMKDIRENFQDLMQYCAQDVWAT--- 375
Query: 66 IQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLAGML 125
+EV Q PLFLER PHPVTLAGML
Sbjct: 376 -----------------------------------YEVFQQQLPLFLERCPHPVTLAGML 400
Query: 126 ELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDKYKDSLWLWDQ 185
E+ +YLPVN NW +Y E+ T+ +L EMK LMD + AC LL +YK+ WLWD
Sbjct: 401 EMGVSYLPVNQNWERYLVEAQSTYEELQREMKKSLMDLANDACQLLSGQRYKEDPWLWDL 460
Query: 186 DWSVKD-------------------LKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTE 226
+W +++ L ++ DQE P E+ ++G
Sbjct: 461 EWDLQEFKQKKAKKVKRKEPTAASKLPIEGAGAPGDPKDQEDPGPPSEEEVQRDG----- 515
Query: 227 DEFVKRRRELVEKFKPLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIH 286
R +E K T + LP +L G+P WYRKLC +
Sbjct: 516 -----MARACLEHLK---GTAEVLPKRPQHLPGHPGWYRKLCPR---------------- 551
Query: 287 DGISDTSEAWIPGPSLISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTD-IKVPD 345
+ D AW PGPSL+S M++TPKL+++TW PLH+ HGWGYLVP D +
Sbjct: 552 --LDDP--AWTPGPSLLSLQMRVTPKLMAMTWDGFPLHYSERHGWGYLVPGRRDNLAQAP 607
Query: 346 AENIP--------------------LEQLKQLYNNITKQDNCEANVDNAQNSLRDSVE-- 383
AE P LEQ KQ + + E + +++ +VE
Sbjct: 608 AETAPASAGVACPYRAIESLYRKHCLEQGKQ-HPEPQQAGLAEEFLLTDGSTMWQTVEEL 666
Query: 384 -----------TNISFIDCSKSA---KRLEVIANVLDKKKLAEASSTDTSTDDADTPREI 429
+ +C A + L + A K + +D D P
Sbjct: 667 GCLEVEAEVEAEAEARAECCGEAVPGQPLALTAAGGPKASQPAYHHGNGPYNDVDVP-GC 725
Query: 430 GFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAK--RIIEISRMLSYWRNNHER 487
F KLPHKDG NVG+P ++DF+ K D +L GA R +EI++M+S+WRN H+R
Sbjct: 726 WFFKLPHKDGSSCNVGSPFAKDFLPKMEDGTLQAGPGGASGPRALEINKMISFWRNAHKR 785
Query: 488 VKKQFVVWLNKKDLPRRLVE--NIESEGRDYGVILPQLIVSGTLTRRAVEATWMTASNAV 545
+ Q VVWL + LPR + + + EGR YG ILPQ++ +GT+TRRAVE TW+TA +
Sbjct: 786 ISSQMVVWLPRSALPRAVTRHPDYDEEGR-YGAILPQVVTAGTITRRAVEPTWLTARPDL 844
Query: 546 G----ERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLS 601
+RVGSEL+AM+QAP GY ++GADVDSQELWIA+V+GD++ A+ HG T GWMTL
Sbjct: 845 PPLQPDRVGSELKAMVQAPPGYVLVGADVDSQELWIAAVLGDAHFARMHGCTAFGWMTLQ 904
Query: 602 GQKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKA 661
G+KS TD+HS TA VGISREHAKI NY RIYGAG+ FAERLL QFN +++ +A KA
Sbjct: 905 GRKSRGTDLHSKTAATVGISREHAKIFNYGRIYGAGQPFAERLLMQFNHRLTRQEAAEKA 964
Query: 662 RKMYTLTKGKKLYRLKDGHLEELIKRVYSKYE---------------AREVCSAYNTSVD 706
++MY +TKG + YRL D E L++ ++ + RE
Sbjct: 965 QQMYAVTKGLRRYRLSD-EGEWLVRELHLPVDRTEDGWVSLQDLRKIQREASRKSRWKKW 1023
Query: 707 KIFDKPQWYGGTESAMFNRLEEIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWV 766
++ + W GGTES MFN+LE IA S P TP L CR+SRALEP S +F+ +R+NWV
Sbjct: 1024 EVVAERAWMGGTESEMFNKLESIAMSDTPCTPVLGCRISRALEP-SAVQGEFMTSRVNWV 1082
Query: 767 VQSGAVDFLHLMLVCMRWLVSR---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLT 823
VQS AVD+LHLMLV M+WL D RF ISIHDE+RYLV +E++Y ALAL +TNLLT
Sbjct: 1083 VQSSAVDYLHLMLVAMKWLFEEFAIDGRFCISIHDEVRYLVREEDRYRAALALQITNLLT 1142
Query: 824 RAFCIKKLDMTDIPLSISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDI 883
R KL + D+P S++FFS V+ID+ LRKE DCKTPSNP G+ + YGIP GE LDI
Sbjct: 1143 RCMFAYKLGLNDLPQSVAFFSTVDIDQCLRKEVTMDCKTPSNPTGMERRYGIPQGEALDI 1202
Query: 884 YQTIDKANGVI 894
YQ I+ G +
Sbjct: 1203 YQIIELTKGSL 1213
>gi|327284750|ref|XP_003227099.1| PREDICTED: DNA polymerase subunit gamma-1-like [Anolis carolinensis]
Length = 1165
Score = 700 bits (1806), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/937 (43%), Positives = 537/937 (57%), Gaps = 124/937 (13%)
Query: 6 WTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLATFEV 65
W N+SS+N+L++V+ LY G+ L+K R +FV+GS+ DI NN+ +LM YCA D LA
Sbjct: 287 WVNISSINNLADVHALYVGGQPLEKEARELFVKGSMTDIRNNFQDLMRYCAFDVLA---- 342
Query: 66 IQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLAGML 125
T EV Q PLFLER PHPVT AGML
Sbjct: 343 ----------------------------------THEVCQEQLPLFLERCPHPVTFAGML 368
Query: 126 ELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDKYKDSLWLWDQ 185
E+ +YLPVN NW +Y E+ TF +L EMK LM+ D AC LLH D+YKD WLWD
Sbjct: 369 EMGVSYLPVNQNWERYLEEAQLTFEELQKEMKKSLMNLADGACQLLHGDRYKDDPWLWDL 428
Query: 186 DWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNG------ED-----QTEDEFVKRRR 234
+W +++ K KK+ K ++ E+F ++ + ED + E++ + R
Sbjct: 429 EWDLQEFKQKKQKKKENWRKKDQGNHEDFPKVVEKASTMECQEDPGPPTEEEEQGIPESR 488
Query: 235 ELVEKFKPLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSE 294
+ + K +T P +L G+P WYRKLC + DA S
Sbjct: 489 LSLNRLK---ETVALQPKRIQHLPGHPGWYRKLCPR-----LDAPS-------------- 526
Query: 295 AWIPGPSLISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTD-IKVPDAEN----I 349
W+PGPSLIS M++TPKL+ LTW PLH+ +GWGYLVP D + P +
Sbjct: 527 -WVPGPSLISLQMRVTPKLMRLTWDGFPLHYSEKYGWGYLVPGRKDNLAEPGPGDPLPTC 585
Query: 350 PLEQLKQLYNNITKQDNCEANVDNAQNSLRDSVETNISFIDCS------KSAKRLEV--- 400
P ++ LY K+ E + SL S+E + S + R+E+
Sbjct: 586 PFRVIEHLYREHCKERGKEEPI-----SLDTSLEEEHMLTESSTIWQKVEELSRMEMEMD 640
Query: 401 ---IANVLDKKKLAEASSTDTSTDDADTPREIG-----FIKLPHKDGEHLNVGNPLSRDF 452
++N L + ++ A S E+ F +LPHKDG NVG+P ++DF
Sbjct: 641 VDPMSNQLRQDEMGFAQSHPEYHHGNGPYNEVNIPGCWFFRLPHKDGSDNNVGSPFAKDF 700
Query: 453 INKFSDNSLAGVDIGAK---RIIEISRMLSYWRNNHERVKKQFVVWLNKKDLPRRLVENI 509
++K D +L IGA + +EI++ +S+WRN H+R+ Q VVWL K +LPR + +
Sbjct: 701 LSKMEDGTLK-AGIGATDGTQALEINKKISFWRNAHKRISFQMVVWLKKGELPRSVTRHP 759
Query: 510 E-SEGRDYGVILPQLIVSGTLTRRAVEATWMTASNAVGERVGSELRAMIQAPDGYSIIGA 568
+ E YG ILPQ+I +GT+TRRAVE TW+TASNA +RVGSEL+AM+QAP GY ++GA
Sbjct: 760 DYDEESRYGAILPQVITAGTVTRRAVEPTWLTASNARADRVGSELKAMVQAPPGYHLVGA 819
Query: 569 DVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMHSITAKAVGISREHAKII 628
DVDSQELWIA+V+G+++ A HG T GWMTL G+KS+ TD+HS TA VGISREHAK+
Sbjct: 820 DVDSQELWIAAVLGEAHFAGLHGCTAFGWMTLQGKKSSGTDLHSKTASTVGISREHAKVF 879
Query: 629 NYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKGKKLYRLKDGHLEELIKRV 688
NY RIYGAG+ FAERLL QFN +++ A KAR+MY TKG + L + E L+K +
Sbjct: 880 NYGRIYGAGQPFAERLLMQFNHRLTEQQASEKARQMYAATKGIRRCHLSE-EGEWLVKEL 938
Query: 689 YSKYEAREVCSAYNTSVDKI---------------FDKPQWYGGTESAMFNRLEEIATSL 733
+ E S V KI + W GTES MFN+LE IA S
Sbjct: 939 GIPVDRAENGSVSLQDVRKIHREVGKRSQKKKWDVVRQRVWSNGTESEMFNKLESIAMSD 998
Query: 734 QPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLVCMRWLV---SRDT 790
P TP L CR+SRALEP + +F+ +R+NWVVQS AVD+LHLMLV M+WL S D
Sbjct: 999 SPCTPVLGCRISRALEPAAV-KGEFVTSRVNWVVQSSAVDYLHLMLVAMKWLFEEYSIDG 1057
Query: 791 RFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIPLSISFFSGVEIDK 850
RF ISIHDE+RYLV E++Y ALAL +TNLLTR KL + D+P S++FFS V+ID+
Sbjct: 1058 RFCISIHDEVRYLVQSEDRYRAALALQITNLLTRCMFAYKLGLQDLPQSVAFFSAVDIDQ 1117
Query: 851 VLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTI 887
LRKE DC TPSNP G+ + Y IP GE LDIYQ +
Sbjct: 1118 CLRKEVTMDCVTPSNPTGMERRYSIPQGEALDIYQLL 1154
>gi|301605305|ref|XP_002932281.1| PREDICTED: DNA polymerase subunit gamma-1-like [Xenopus (Silurana)
tropicalis]
Length = 1197
Score = 697 bits (1798), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/942 (42%), Positives = 537/942 (57%), Gaps = 118/942 (12%)
Query: 6 WTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLATFEV 65
W N+SS+N+L++V+ LY G L+K R +FV+GS+ DI + LM YCA D AT
Sbjct: 321 WVNISSINNLADVHALYVGGPPLEKEARELFVKGSISDIRTEFQELMRYCALDVQATH-- 378
Query: 66 IQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLAGML 125
E+ Q FPLF+ER PHPVTL+GML
Sbjct: 379 ------------------------------------EIFQEQFPLFMERCPHPVTLSGML 402
Query: 126 ELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDKYKDSLWLWDQ 185
E+ +YLPVN NW +Y +E+ ++ +L EMK LM+ + AC LL +D YK+ WLWD
Sbjct: 403 EMGVSYLPVNQNWERYLDEAQTSYEELQKEMKKSLMNLANDACQLLTEDAYKEDPWLWDL 462
Query: 186 DWSVKDLKLKKKANKT----LSVDQETEEPEEFYEINKNGEDQTEDEFVKRRRELVEKFK 241
+W +++ K KK L QE+ + ++N++ +E+E + +
Sbjct: 463 EWDIQEFKQKKTKISKKQKRLKEAQESVGNKFIEDLNEDTGPPSEEEESRPSLAKIYLED 522
Query: 242 PLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIPGPS 301
++T LP S +L G+P WYRKLC K D W+PGPS
Sbjct: 523 LKLKTLPLLPKRSQHLPGHPGWYRKLCPKLEDPD--------------------WLPGPS 562
Query: 302 LISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTD--IKVPDAENI--PLEQLKQL 357
LIS M++TPKL+ LTW PLH+ HGWGYLVP D + E I P ++ +
Sbjct: 563 LISLQMRLTPKLMRLTWDGFPLHYSEKHGWGYLVPGKKDNILNNEQEETILCPYRAIEDI 622
Query: 358 YNNITKQDNCEANVDNAQNSLRDSVETNISFIDCSKSAKRLEVIANVLDKKKLAEASSTD 417
++ +K + V S S+ + D S +++E ++ ++ AE ST
Sbjct: 623 FSEYSKNKAKDRRV-----SEHSSLHEDFILTDDSSMWQKVEQLSR-MEMDLSAEVPSTG 676
Query: 418 TSTDDADTPREIG--------------------------FIKLPHKDGEHLNVGNPLSRD 451
T + P F KLPHKDG NVG+P ++D
Sbjct: 677 TMKKRNNKPEPPAEPEFCSLPDYHHGNSPCSDVNVSGCWFYKLPHKDGYANNVGSPFAKD 736
Query: 452 FINKFSDNSLAGV--DIGAKRIIEISRMLSYWRNNHERVKKQFVVWLNKKDLPRRLVENI 509
F+ K D +L D A R +EI++M+S+WRN H+R+ Q VVW+ K +LPR + +
Sbjct: 737 FLPKMEDGTLQASIGDSSATRALEINKMISFWRNAHKRISSQMVVWMKKGELPRTITRDP 796
Query: 510 E-SEGRDYGVILPQLIVSGTLTRRAVEATWMTASNAVGERVGSELRAMIQAPDGYSIIGA 568
E E YG ILP ++ +GT+TRRAVE TW+TASNA +RVGSEL+AM+Q P GY IIGA
Sbjct: 797 EYDEENKYGCILPLVVSAGTITRRAVEPTWLTASNARADRVGSELKAMVQVPPGYHIIGA 856
Query: 569 DVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMHSITAKAVGISREHAKII 628
DVDSQELWIA+++G+++ A HG T GWMTL G+KS TD+HS TA VGISREHAK+
Sbjct: 857 DVDSQELWIAAILGEAHFAGIHGCTAFGWMTLQGKKSTGTDLHSKTASTVGISREHAKVF 916
Query: 629 NYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKGKKLYRL-KDGH--LEEL- 684
NY RIYGAG+ FAERLL QFN +++ A KA++MY +TKG + Y L K+G +EEL
Sbjct: 917 NYGRIYGAGQAFAERLLMQFNHRLTQEQAAEKAKQMYAVTKGIRRYILSKEGEWLVEELG 976
Query: 685 --IKR----VYSKYEAREV---CSAYNTSVDKIFDKPQWYGGTESAMFNRLEEIATSLQP 735
++R S + R++ SA + + + W GGTES MFN+LE IA S P
Sbjct: 977 IPVERGEENSVSLQDLRKIQKEASAKSRRKWNLVSRRIWTGGTESQMFNKLETIAMSPSP 1036
Query: 736 VTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLVCMRWLVSR---DTRF 792
TP L C +SRALEP + +FI +RINWVVQS AVD+LHLMLV M+WL D RF
Sbjct: 1037 KTPVLGCHISRALEPAAV-KGEFITSRINWVVQSSAVDYLHLMLVAMKWLFEAYDIDGRF 1095
Query: 793 VISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIPLSISFFSGVEIDKVL 852
ISIHDE+RYLV +++Y ALAL +TNLLTR +L M D+P S++FFS V+IDK L
Sbjct: 1096 CISIHDEVRYLVQSKDRYRAALALQITNLLTRCMFASRLGMQDLPQSVAFFSAVDIDKCL 1155
Query: 853 RKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKANGVI 894
RKE DC TPSNP G+ K YGIP GE LDIYQ + GV+
Sbjct: 1156 RKEVTMDCATPSNPTGMEKRYGIPQGEALDIYQILKVTKGVL 1197
>gi|449281246|gb|EMC88367.1| DNA polymerase subunit gamma-1, partial [Columba livia]
Length = 1177
Score = 695 bits (1794), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/973 (40%), Positives = 543/973 (55%), Gaps = 151/973 (15%)
Query: 1 MTDESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTL 60
+T W +VSS+N+L++V+ LY G+ L+K R +FV+G++ DI +++ +LM+YCA D
Sbjct: 274 ITSWDWVHVSSINNLADVHALYVGGEPLEKEARELFVKGTMADIRSHFQDLMSYCAHDVQ 333
Query: 61 ATFEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVT 120
AT EV Q PLF+ER PHPVT
Sbjct: 334 ATH--------------------------------------EVFQEQLPLFMERCPHPVT 355
Query: 121 LAGMLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDKYKDSL 180
AGMLE+ +YLPVN NW +Y +++ + +L EMK LM+ + AC LLH+D+YKD
Sbjct: 356 FAGMLEMGVSYLPVNGNWKRYLDDAQSIYEELQKEMKKSLMNLANDACQLLHEDRYKDDP 415
Query: 181 WLWDQDWSVKDLKLKKKANK--------------TLSVDQETEEPEEFYEINKNGEDQTE 226
WLWD +W ++ K KK K D T+E +E + E
Sbjct: 416 WLWDLEWDTQEFKQKKNPGKKRKDQNRNSKAPVAAAGADGTTQEWQEVLLTLSDPGPPGE 475
Query: 227 DEFVKRRRELVEKFKPLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIH 286
DE ++ V + L +T P +L G+P WYRKLC + A
Sbjct: 476 DEELEAPASQVH-LERLKETVVLQPKRLQHLPGHPGWYRKLCPRLEDA------------ 522
Query: 287 DGISDTSEAWIPGPSLISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTDIKVPDA 346
W+PGPSLIS M++TPKL+ L W PLH+ HGWGYLVP D +P A
Sbjct: 523 --------GWVPGPSLISLQMRVTPKLMRLAWDGFPLHYSEKHGWGYLVPGRQD-NLPAA 573
Query: 347 ENIPLEQ---------LKQLYNNITKQDNCEANVDNAQNSLRDSVETNISFIDCSKSAKR 397
PLE+ ++ LY + +C +VE + +D S ++
Sbjct: 574 ---PLEEKGPVCPHRVIEYLY-----RQHCLEKGKEQLPGPEAAVEDEMLVMDGSTMWQK 625
Query: 398 LEVIAN--VLDKKKLAEASST---------------------DTSTDDADTPREIGFIKL 434
+E ++ V ++K+ A+ + + +D + P F KL
Sbjct: 626 VEELSRLEVDVEEKMGRANQSLVQVKRVYCGMGYHRPSHHHGNGPYNDVNIP-GCWFFKL 684
Query: 435 PHK----------DGEHLNVGNPLSRDFINKFSDNSLAGVDIG---AKRIIEISRMLSYW 481
PHK DG NVG+P ++DF+ + D +L +G R +EI++M+S+W
Sbjct: 685 PHKATLTSVLLLKDGNDNNVGSPFAKDFLPQMEDGTLRAA-VGRTHGTRALEINKMISFW 743
Query: 482 RNNHERVKKQFVVWLNKKDLPRRLVENIE-SEGRDYGVILPQLIVSGTLTRRAVEATWMT 540
RN H+R+ Q VVWL K +LPR + + + +E DYG ILPQ++ +GT+TRRAVE TW+T
Sbjct: 744 RNAHKRISSQMVVWLKKGELPRTVTRHPDYNEEDDYGAILPQVVTAGTITRRAVEPTWLT 803
Query: 541 ASNAVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTL 600
ASNA +RVGSEL+AM+Q P GYS++GADVDSQELWIA+V+G+++ A HG T GWMTL
Sbjct: 804 ASNARADRVGSELKAMVQVPPGYSLVGADVDSQELWIAAVLGEAHFAGMHGCTAFGWMTL 863
Query: 601 SGQKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSK 660
G+KSNATD+HS TA VGISREHAKI NY RIYGAG+ FAERLL QFN +++ A+ K
Sbjct: 864 QGKKSNATDLHSKTAATVGISREHAKIFNYGRIYGAGQPFAERLLMQFNHRLTQQQAREK 923
Query: 661 ARKMYTLTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDK------------- 707
A++MY +TKG + + L + E L++ + + E S V +
Sbjct: 924 AQQMYAVTKGVRRFLLSE-EGEWLVRELDLAVDRAEDGSVSLQDVQRLQREATKRSRRKK 982
Query: 708 ---IFDKPQWYGGTESAMFNRLEEIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRIN 764
+ + W GGTES MFN+LE IA S P TP L C +SRALEP +F+ +R+N
Sbjct: 983 KWDVVEHRVWAGGTESEMFNKLESIALSPSPQTPVLGCHISRALEPAVA-KGEFLTSRVN 1041
Query: 765 WVVQSGAVDFLHLMLVCMRWLVSR---DTRFVISIHDEIRYLVPDEEKYETALALHVTNL 821
WVVQS AVD+LHLMLV M+WL + RF ISIHDE+RYLV +++Y ALAL +TNL
Sbjct: 1042 WVVQSSAVDYLHLMLVAMKWLFEEFDINGRFCISIHDEVRYLVQHQDRYRAALALQITNL 1101
Query: 822 LTRAFCIKKLDMTDIPLSISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEIL 881
LTR KL + D+P S++FFS V++D+ LRKE +C TPSNP G+ K YGIP GE L
Sbjct: 1102 LTRCMFAYKLGLQDLPQSVAFFSAVDVDQCLRKEVTMNCTTPSNPTGMEKKYGIPQGEAL 1161
Query: 882 DIYQTIDKANGVI 894
DIYQ I+ G +
Sbjct: 1162 DIYQLIEITKGSL 1174
>gi|157138880|ref|XP_001647551.1| DNA polymerase gamma [Aedes aegypti]
gi|108865347|gb|EAT32219.1| AAEL015671-PA [Aedes aegypti]
Length = 657
Score = 694 bits (1792), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 352/604 (58%), Positives = 426/604 (70%), Gaps = 23/604 (3%)
Query: 292 TSEAWIPGPSLISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTDIKVPDAEN--I 349
T + W PGP+ I T MQI PKLL L W+ PLHFIRG GWG+LVP+ + D E I
Sbjct: 31 TEDEWSPGPTNIGTGMQIAPKLLRLCWEGYPLHFIRGQGWGFLVPHKFTREDDDIEGGMI 90
Query: 350 PLEQLKQLYNNITKQDNCEANVDNAQNSL----RDSVETNISFIDCSKSAKRLEVIANVL 405
PLEQL + + N EA +Q +L RD VE NIS D + L
Sbjct: 91 PLEQLAAACPVL--EINPEATTGESQEALGSLWRD-VEQNISRKDYYRK----------L 137
Query: 406 DKKKLAEASSTDTSTDDADTPREIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVD 465
K K A + D F+KLPHKDG VGNPLS+DF+NKFS+N LAG
Sbjct: 138 KKDKTNNAYKGTGIWCNLDLEECCYFLKLPHKDGPSHRVGNPLSKDFLNKFSENVLAGDG 197
Query: 466 IGAKRIIEISRMLSYWRNNHERVKKQFVVWLNKKDLPRRLVENIESEGRDYGVILPQLIV 525
A+R++EI++MLSYWRNN +R+ Q VVWL K LP+ L E DYG I+PQ++V
Sbjct: 198 KTAERVVEIAKMLSYWRNNRDRINGQLVVWLGKDQLPKHL----RDEDMDYGAIIPQVVV 253
Query: 526 SGTLTRRAVEATWMTASNAVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSY 585
GTLTRRA+E TWMTASNA ER+GSELRAM+QAP GY ++GADVDSQELWIASV+GD +
Sbjct: 254 CGTLTRRAMEPTWMTASNAQRERIGSELRAMVQAPKGYKMVGADVDSQELWIASVLGDGH 313
Query: 586 CAKEHGATPLGWMTLSGQKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLL 645
A HGATPLGWMTLSG K+ TDMHS+TA+AVGISR+HAK+INYARIYGAG+ FAERLL
Sbjct: 314 AAGIHGATPLGWMTLSGSKAAKTDMHSVTAQAVGISRDHAKVINYARIYGAGQNFAERLL 373
Query: 646 KQFNPEMSKSDAKSKARKMYTLTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSV 705
KQFNP S+++A+SKA KM+ LTKGKK Y LK + +E + YS YEA ++ N +V
Sbjct: 374 KQFNPTFSEAEARSKAMKMFALTKGKKFYYLKPDYRDEFPHKGYSGYEALKMAKVCNKAV 433
Query: 706 DKIFDKPQWYGGTESAMFNRLEEIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINW 765
D++F+K +W GGTESAMFNRLEEIA S PVTPFL RLSRALEP + +F+ TRINW
Sbjct: 434 DEMFEKARWEGGTESAMFNRLEEIAGSEAPVTPFLGGRLSRALEPQEGTEERFLPTRINW 493
Query: 766 VVQSGAVDFLHLMLVCMRWLVSRDTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRA 825
VVQSGAVDFLHLMLV MRWL+ RF +S HDE+RYLV D + ALA+HVTNLLTRA
Sbjct: 494 VVQSGAVDFLHLMLVSMRWLMGNRVRFCLSFHDEVRYLVEDRYAHRAALAMHVTNLLTRA 553
Query: 826 FCIKKLDMTDIPLSISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQ 885
FC+ +L + D+P S++FFS VE+D VLRKES DCKTPSNP+GL GYGIP GE L+I Q
Sbjct: 554 FCVSRLGLNDLPQSVAFFSTVEVDTVLRKESHMDCKTPSNPHGLAVGYGIPNGESLNISQ 613
Query: 886 TIDK 889
++K
Sbjct: 614 LLEK 617
>gi|1297340|gb|AAA98977.1| DNA polymerase gamma [Mus musculus]
Length = 1238
Score = 689 bits (1777), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 398/943 (42%), Positives = 532/943 (56%), Gaps = 122/943 (12%)
Query: 9 VSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLATFEVIQA 68
+SS N+L++V+ LY G L+K R +FV+GS+ DI N+ +LM YCA+D AT
Sbjct: 332 ISSANNLADVHNLYVGGPPLEKEPRELFVKGSMRDIRENFQDLMQYCARDVWAT------ 385
Query: 69 LFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLAGMLELS 128
FEV Q PLFLER PHPVTLAGMLE+
Sbjct: 386 --------------------------------FEVFQQQLPLFLERCPHPVTLAGMLEMG 413
Query: 129 TAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDKYKDSLWLWDQDWS 188
+YLPVN NW +Y E+ T+ +L + + +++ LL ++YK+ WLWD +W
Sbjct: 414 VSYLPVNQNWERYLTEAQNTYEELQRDDEEVVVVWLMMPGQLLSGERYKEDPWLWDLEWD 473
Query: 189 VKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQ------TEDEFVKRRRELVEKFKP 242
+++ K KK ++ P E + DQ +E+E ++R + +
Sbjct: 474 LQEFKQKKAKKVKKPAS-ASKLPIEGAGPFGDPMDQEDPGPPSEEEELQRSVTAHNRLQQ 532
Query: 243 LMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIPGPSL 302
L T D LP +L G+P WYRKLC + + D AW PGPSL
Sbjct: 533 LRSTTDLLPKRPQHLPGHPGWYRKLCPR------------------LDDP--AWAPGPSL 572
Query: 303 ISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTD-IKVPD--------AENIPLEQ 353
+S M++TPKL++LTW PLH+ HGWGYLVP D + P A P
Sbjct: 573 LSLQMRVTPKLMALTWDGFPLHYSDSHGWGYLVPGRRDNLTEPPVSPTVESAAVTCPYRA 632
Query: 354 LKQLYNNIT----KQDNCEANVDNAQ-------NSLRDSVETNISFIDCSKSAKR----- 397
++ LY KQ VD A+ +++ +VE + +D AK
Sbjct: 633 IESLYRKHCLEQGKQQLEPQEVDLAEEFLLTDSSAMWQTVE-ELGCLDVEAEAKMENSGL 691
Query: 398 ---LEVIANVLDKKKLAEASSTDTSTDDADTPREIGFIKLPHKDGEHLNVGNPLSRDFIN 454
L + A K + +D + P F KLPHKDG + NVG+P ++DF+
Sbjct: 692 SQPLVLPAACAPKSSQPTYHHGNGPYNDVNIP-GCWFFKLPHKDGNNYNVGSPFAKDFLP 750
Query: 455 KFSDNSLAGVDIGAK--RIIEISRMLSYWRNNHERVKKQFVVWLNKKDLPRRLVEN--IE 510
K D +L GA R +EI++M+S+WRN H+R+ Q VVWL + LPR + + +
Sbjct: 751 KMEDGTLQAGPGGASGPRALEINKMISFWRNAHKRISSQMVVWLPRSALPRVVTRHPAFD 810
Query: 511 SEGRDYGVILPQLIVSGTLTRRAVEATWMTASNAVGERVGSELRAMIQAPDGYSIIGADV 570
EG YG ILPQ++ +GT+TRRAVE TW+TASNA +RVGSEL+AM+QAP GY ++GADV
Sbjct: 811 EEGH-YGAILPQVVTAGTITRRAVEPTWLTASNARPDRVGSELKAMVQAPTGYVLVGADV 869
Query: 571 DSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMHSITAKAVGISREHAKIINY 630
DSQELWIA+V+GD++ A HG T GWMTL G+KS TD+HS TA V I REHAKI NY
Sbjct: 870 DSQELWIAAVLGDAHLAGMHGCTAFGWMTLQGRKSRGTDLHSKTAATVRIHREHAKIFNY 929
Query: 631 ARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKGKKLYRLK-DGHLEELIKRVY 689
RIYGAG+ FAERLL QFN +++ +A KA++MY +TKG + YRL DG E L+K++
Sbjct: 930 GRIYGAGQSFAERLLMQFNHRLTRQEAAEKAQQMYAVTKGLRRYRLSADG--EWLVKQLN 987
Query: 690 SKYE---------------AREVCSAYNTSVDKIFDKPQWYGGTESAMFNRLEEIATSLQ 734
+ RE ++ + W GGTES MFN+LE IA S
Sbjct: 988 LPVDRTEDGWVSLQDLRMIRREASRKSRWKKWEVASERAWTGGTESEMFNKLESIAMSDT 1047
Query: 735 PVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLVCMRWLVSR---DTR 791
P TP L C +SRALEP S +FI +R+NWVVQS AVD+LHLMLV M+WL D R
Sbjct: 1048 PRTPVLGCCISRALEP-SVVQGEFITSRVNWVVQSSAVDYLHLMLVAMKWLFEEFAIDGR 1106
Query: 792 FVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIPLSISFFSGVEIDKV 851
F ISIHDE+RYLV +E++Y ALAL +TNLLTR KL + D+P S++FFS V+ID+
Sbjct: 1107 FCISIHDEVRYLVREEDRYRAALALQITNLLTRCMFAYKLGLNDLPQSVAFFSAVDIDQC 1166
Query: 852 LRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKANGVI 894
LRKE DCKTPSNP G+ + YGIP GE LDIYQ I+ G +
Sbjct: 1167 LRKEVTMDCKTPSNPTGMERRYGIPQGEALDIYQIIELTKGSL 1209
>gi|321462891|gb|EFX73911.1| hypothetical protein DAPPUDRAFT_226991 [Daphnia pulex]
Length = 1206
Score = 687 bits (1772), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/946 (42%), Positives = 542/946 (57%), Gaps = 124/946 (13%)
Query: 6 WTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLATFEV 65
W NVSS N L++VYKLYC G LDK RNIFV GSL DI++++ L+TYCA+D AT
Sbjct: 314 WQNVSSFNGLNDVYKLYCGGLGLDKEKRNIFVTGSLTDIKDDFQQLVTYCARDCQAT--- 370
Query: 66 IQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLAGML 125
+ ++ L P F +RFPHPVTLAGML
Sbjct: 371 -----------------------------------YRILCVLLPEFQKRFPHPVTLAGML 395
Query: 126 ELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDKYKDSLWLWDQ 185
E+ST+YLPVN NW +Y ES T+ D E+ L + D+A ++ D Y+ WLWD
Sbjct: 396 EMSTSYLPVNRNWQRYLQESEDTYRDSENELTQSLKREADRASHMMTDKSYEKDPWLWDL 455
Query: 186 DWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRRELVEKFKPLMQ 245
DWS K LK+KK + E + D+ + ++L +F+ L
Sbjct: 456 DWSTKPLKVKKTSVPKKKKSAAVIPSLNNGESENQTNKEDNDDVILEIQKLKCQFQELFN 515
Query: 246 TKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIPGPSLIST 305
TK+ L +S+L GYP WY LC + + DG+ GP+ +ST
Sbjct: 516 TKELLFKRNSFLPGYPNWYSSLC--------------DRLQDGLI--------GPTEVST 553
Query: 306 SMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYS-----------TDIKVPDAENI----- 349
S Q+ PKLL LTW PL + R GWGYLVP +I P + +
Sbjct: 554 SAQVVPKLLKLTWDGYPLFYSRELGWGYLVPGRPLNLSRIDEDVCEIPFPLKDALALFPP 613
Query: 350 -PLEQLKQLYNNITKQDNCEANVDNAQNSLRDSVETNISFIDCSKSAKRLEVIANV---L 405
P +Q L I + + + D V+ + + S AN+ +
Sbjct: 614 RPADQ-SVLTKGIITAEEAMLKLRQMTDLTADPVDLAMQWQATRSSLNNDADPANLHPAI 672
Query: 406 DKKKLAEASSTDTSTDDA----DTPREIG-----FIKLPHKDGEHLNVGNPLSRDFINKF 456
DK K E + TS A P ++G F +LPHK G NVGNPL++D++NK
Sbjct: 673 DKSK--EKHTYLTSDRPAWHVGIGPYDVGVVGCWFFRLPHKSGVDNNVGNPLAKDYLNKI 730
Query: 457 SDNSLAGVDIG-AKRIIEISRMLSYWRNNHERVKKQFVVWLNKKDLPRRLVENIESEGRD 515
D +L A+ I++++R + YWRN +R+ Q VVWL + +PR + + SE D
Sbjct: 731 EDGTLKATSSSIAEHILKLNRNIIYWRNARDRIMSQMVVWLRQSQIPRNVTK---SEHFD 787
Query: 516 ----YGVILPQLIVSGTLTRRAVEATWMTASNAVGERVGSELRAMIQAPDGYSIIGADVD 571
YG ILPQ++ SGTLTRRAVE+TW+TASNA +R+GSEL+AMIQ P G++ +GADVD
Sbjct: 788 PLNTYGAILPQIVTSGTLTRRAVESTWLTASNAYKDRIGSELKAMIQCPPGFNFVGADVD 847
Query: 572 SQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMHSITAKAVGISREHAKIINYA 631
SQELWIAS+IGDS+ A +HG+T GWMTL G+KS+ TDMHS TA AV I+R+ AKI+NY
Sbjct: 848 SQELWIASIIGDSFFAGQHGSTAFGWMTLQGKKSDGTDMHSRTAAAVEITRDQAKILNYG 907
Query: 632 RIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKGKKLYRLK---------DGHLE 682
RIYGAGERFA LL QFN +++ +A KARKMY+LTKG L +L G+ +
Sbjct: 908 RIYGAGERFARTLLMQFNHRLTEKEASEKARKMYSLTKGNSLLKLSHYGRQLASASGNKD 967
Query: 683 ELI---KRVYSKYEAREVCS---AYNTSVDKIFDKPQWYGGTESAMFNRLEEIATSLQPV 736
EL+ + + AR+ S N D++ ++ W GGTES MFN+LEEIA S P
Sbjct: 968 ELVTLEQLSEMRKNARKEPSLKQIANLPTDELVERRMWAGGTESHMFNKLEEIAQSESPQ 1027
Query: 737 TPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLVCMRWLVSR-------- 788
TP L+CR+SRALEP + + +F+ +R+NWVVQS AVD+LHLM+V MR+LV
Sbjct: 1028 TPVLHCRISRALEPRNVGN-EFMTSRVNWVVQSSAVDYLHLMIVAMRYLVDVYKLGVVLI 1086
Query: 789 DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIPLSISFFSGVEI 848
+ RF ISIHDE+RY++ +E+K+ ALAL V NL TR ++++ D+P +++FFS V+I
Sbjct: 1087 EGRFSISIHDEVRYIIKEEDKFRAALALQVANLWTRCMFSYQMNLNDLPQAVAFFSSVDI 1146
Query: 849 DKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKANGVI 894
D VLRKES+ DC+TPSNPYGL +GYGI G DIYQ ++KA G +
Sbjct: 1147 DTVLRKESNMDCQTPSNPYGLKQGYGIDFGCSYDIYQILEKAGGSL 1192
>gi|147904034|ref|NP_001081464.1| DNA polymerase subunit gamma-1 [Xenopus laevis]
gi|2494179|sp|Q91684.1|DPOG1_XENLA RecName: Full=DNA polymerase subunit gamma-1; AltName:
Full=Mitochondrial DNA polymerase catalytic subunit
gi|1229142|gb|AAB17117.1| DNA polymerase gamma [Xenopus laevis]
Length = 1200
Score = 681 bits (1757), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/951 (42%), Positives = 532/951 (55%), Gaps = 133/951 (13%)
Query: 6 WTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLATFEV 65
W N+SS+N+L++V+ LY G L+K R +FV+GS+ DI + LM YCA D AT
Sbjct: 321 WVNISSINNLADVHALYVGGPPLEKEARELFVKGSMSDIRTEFQELMRYCALDVQATH-- 378
Query: 66 IQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLAGML 125
EV Q FPLF+ER PHPVTL+GML
Sbjct: 379 ------------------------------------EVFQEQFPLFMERCPHPVTLSGML 402
Query: 126 ELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDKYKDSLWLWDQ 185
E+ +YLPVN NW +Y +E+ ++ +L EMK LM + AC LL D YK+ WLWD
Sbjct: 403 EMGVSYLPVNQNWERYLDEAQTSYEELQKEMKKSLMKLANDACQLLTKDAYKEDPWLWDL 462
Query: 186 DWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRRELVEKFKPLM- 244
+W +++ K KK + E E NK ED ED +E + +P M
Sbjct: 463 EWDIQESKQKKTKISKKQK-KANEAAESVG--NKLVEDHNEDPGPPTEKE---ESRPSMG 516
Query: 245 ---------QTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEA 295
+T LP + +L G+P WYRKLC K D
Sbjct: 517 KLYLEDLKLKTLPLLPKRNQHLPGHPGWYRKLCPKLEDPD-------------------- 556
Query: 296 WIPGPSLISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTDIKVPDAEN-----IP 350
W+PGP LIS M++TPKL+ LTW PLH+ HGWGYLVP + K+ + E P
Sbjct: 557 WLPGPGLISLQMRLTPKLMRLTWDGYPLHYSEKHGWGYLVPGRKNNKLNNEEEEEIIPCP 616
Query: 351 LEQLKQLYNNITK---QDNC--------EANVDNAQNSLRDSVETNISFIDCSKSAKRLE 399
++ +Y +K +D C E + NS+ VE +S + S+ E
Sbjct: 617 YRAIEDIYAEYSKNKTKDGCLSQHSTIPEEFMLTDDNSMWQKVE-ELSRTEMDLSS---E 672
Query: 400 VIANVLDKKKLAEASST-------DTSTDDADTPREIG--------FIKLPHKDGEHLNV 444
V A KK+ + D+ D+ G F KLPHKDG NV
Sbjct: 673 VPATAKAKKRNNSSEHPVKLEMEFDSLPDNHHGNSPCGDVNVSGCWFYKLPHKDGNANNV 732
Query: 445 GNPLSRDFINKFSDNSLAGV--DIGAKRIIEISRMLSYWRNNHERVKKQFVVWLNKKDLP 502
G+P ++DF+ K D +L D A R +EI++M+S+WRN H+R+ Q VVW+ K +L
Sbjct: 733 GSPFAKDFLPKMEDGTLQASTGDSSATRALEINKMISFWRNAHKRISSQMVVWMKKNELH 792
Query: 503 RRLVENIE-SEGRDYGVILPQLIVSGTLTRRAVEATWMTASNAVGERVGSELRAMIQAPD 561
R + + E E YG IL Q++ +GT+TRRAVE TW+TASNA +RVGSEL+AM+Q P
Sbjct: 793 RTITRDPEFDEENKYGAILAQVVSAGTITRRAVEPTWLTASNARADRVGSELKAMVQVPP 852
Query: 562 GYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMHSITAKAVGIS 621
GY +IGADVDSQELWIA+++G+++ A HG T GWMTL G+KS+ TD+HS TA VGIS
Sbjct: 853 GYHLIGADVDSQELWIAAILGEAHFAGIHGCTAFGWMTLQGKKSSGTDLHSKTASTVGIS 912
Query: 622 REHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKGKKLYRL-KDGH 680
REHAK+ NY RIYGAG+ FAERLL QFN +++ A KA++MY +TKG + Y L K+G
Sbjct: 913 REHAKVFNYGRIYGAGQPFAERLLMQFNHRLTQEQAAEKAKQMYAVTKGIRRYILSKEG- 971
Query: 681 LEELIKRVYSKYEAREVCSAYNTSVDKI--------------FDKPQWYGGTESAMFNRL 726
E L++ + E E S + KI + W GGTES MFN+L
Sbjct: 972 -EWLVEELGISVERGEENSVNLQDLRKIQKDATKRSRRKWNLVSRRIWTGGTESQMFNKL 1030
Query: 727 EEIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLVCMRWLV 786
E IA S P TP L CR+SRALEP + +FI +R+NWVVQS AVD+LHLMLV M+WL
Sbjct: 1031 ETIAMSPSPKTPVLGCRISRALEPTAV-KGEFITSRVNWVVQSSAVDYLHLMLVAMKWLF 1089
Query: 787 SR---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIPLSISFF 843
D RF ISIHDE+RYLV +++Y ALAL +TNLLTR +L + D+P S++FF
Sbjct: 1090 EAYDIDGRFCISIHDEVRYLVHSKDRYRAALALQITNLLTRCMFASRLGIQDVPQSVAFF 1149
Query: 844 SGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKANGVI 894
S V+IDK LRKE DC TPSNP G+ K YGIP GE LDIYQ + GV+
Sbjct: 1150 SAVDIDKCLRKEVTMDCSTPSNPNGMEKRYGIPQGEALDIYQILKVTKGVL 1200
>gi|405973943|gb|EKC38630.1| DNA polymerase subunit gamma-1 [Crassostrea gigas]
Length = 1120
Score = 677 bits (1748), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 376/907 (41%), Positives = 523/907 (57%), Gaps = 138/907 (15%)
Query: 1 MTDESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTL 60
M D WTN S++N+L++VY+ +C G+ L+K R++FV+GS+ D+ + L TYCA D
Sbjct: 325 MVDSYWTNESTMNNLNDVYQHHCGGRPLEKATRDVFVKGSMADVREMYQELCTYCASDVE 384
Query: 61 ATFEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVT 120
A T V + ++P FLERFP+PVT
Sbjct: 385 A--------------------------------------TLHVFRKVWPQFLERFPNPVT 406
Query: 121 LAGMLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDKYKDSL 180
L+GM+E+ +AYLP+N NW +Y N+S ++DL E+ LL ++AC LLHD +Y++ L
Sbjct: 407 LSGMMEMGSAYLPINQNWERYLNQSDAVYDDLQNELSRLLQKLANEACELLHDKRYEEDL 466
Query: 181 WLWDQDWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRRELVEKF 240
WLWD DWSV KL K K ++E + P+E E
Sbjct: 467 WLWDLDWSVNTYKLNKPKKKPKDTNKE-KTPDEILE------------------------ 501
Query: 241 KPLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIPGP 300
++ +KDR+P S +++GYP WYR+LC P ++D D W PGP
Sbjct: 502 -DILASKDRIPKVSRHMVGYPAWYRELC--PRTSDPD------------------WKPGP 540
Query: 301 SLISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVP-----YSTDIKVPDAE----NIPL 351
SL+STS +ITPKLL +T+K PLH+ +GWGYL+P S K+ AE P+
Sbjct: 541 SLVSTSRRITPKLLRMTYKGYPLHYDDKYGWGYLIPDKHKAASDRQKLAMAEEGMSKFPI 600
Query: 352 EQLKQLYNNITKQDNCEANVDNAQNSLRDSVETNISFIDCSKSAKRLEVIANVLDKKKLA 411
L ++ N + D S+ ++ + ++ + + +K + K +
Sbjct: 601 ANLFKMCNESVSEGLLVPMSDKELESMLNTAKDDMEWTERAKHLDEAGIKKQAKKKDDIL 660
Query: 412 EASSTDTSTDDADTPREIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRI 471
E T D P F KLPHKDG+ NVGNPLS+DF+ L + I A+ +
Sbjct: 661 EVKETKY---DIGIP-GCWFQKLPHKDGKGSNVGNPLSKDFLPLIETGVLKSLLITAENV 716
Query: 472 IEISRMLSYWRNNHERVKKQFVVWLNKKDLPRRLVENIESEGRD-YGVILPQLIVSGTLT 530
+++++M SYW+NN +R+ Q + L ++DLP + + + YG I+P+++ +GT+T
Sbjct: 717 LKLTKMCSYWKNNRDRISGQMALTLEEEDLPSTVTSDPDYHNDGMYGSIVPRVVPAGTIT 776
Query: 531 RRAVEATWMTASNAVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEH 590
RRAVE TWMTASNA +RVGSE+++MIQ+P GY +GADVDSQELWIA+VIGDS + H
Sbjct: 777 RRAVEKTWMTASNAYVDRVGSEMKSMIQSPPGYHFVGADVDSQELWIAAVIGDSK-HRIH 835
Query: 591 GATPLGWMTLSGQKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNP 650
G+TP GWMTL G K++ TD+HS TA+ GISR+HAKI+NY RIYGAG++FAE LL FN
Sbjct: 836 GSTPFGWMTLQGNKTDKTDLHSKTAETAGISRDHAKILNYGRIYGAGQKFAETLLMNFNH 895
Query: 651 EMSKSDAKSKARKMYTLTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFD 710
+ ++A +KARK+Y TKGK+ K G +K+
Sbjct: 896 NLLPTEASAKARKLYETTKGKR----KRG--------------------------EKV-- 923
Query: 711 KPQWYGGTESAMFNRLEEIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSG 770
W GGTES MFN LE IA S P TP L +S+ LEP D +F+ +RINWVVQS
Sbjct: 924 ---WEGGTESEMFNMLESIARSASPKTPVLKASISKVLEPEIIGD-EFMTSRINWVVQSS 979
Query: 771 AVDFLHLMLVCMRWLVSR---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFC 827
AVD+LHLMLVCM WL ++ D RF ISIHDE+RYLV +++Y LAL +TNLLTR+
Sbjct: 980 AVDYLHLMLVCMNWLCNQYDIDARFSISIHDEVRYLVSSKDRYRAVLALQITNLLTRSMF 1039
Query: 828 IKKLDMTDIPLSISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTI 887
+ L M D+PLS++FFS V+ID+ LRKE +CKTPSNP G+ + Y IP GE DIYQT+
Sbjct: 1040 ARALGMNDLPLSVAFFSKVDIDQCLRKEVGLECKTPSNPSGMERAYNIPFGEGQDIYQTL 1099
Query: 888 DKANGVI 894
NG +
Sbjct: 1100 QITNGSL 1106
>gi|47219815|emb|CAG03442.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1246
Score = 656 bits (1693), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/993 (39%), Positives = 535/993 (53%), Gaps = 154/993 (15%)
Query: 6 WTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLATFEV 65
W N+SS+N+L++V+ LY G L K R FV+GSL D+ NN+ ++
Sbjct: 299 WVNISSINNLADVHALYVGGPPLQKEARETFVKGSLRDVRNNFQVRGSFLVDRKRPNPRG 358
Query: 66 IQALFPLF----------LERFPHPVTL---AGMLE---LSTAYLPDTLATFEVI----- 104
+ ++PL L HP +L A L L T+ P+ V+
Sbjct: 359 ARVIWPLLTSAGADAVLRLGCRSHPSSLHRAAPSLHGEVLLTSLSPEPCLLINVLTDEQK 418
Query: 105 QALFPLFLERFPHPVTLAGMLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKC 164
Q +FP + R PHPVT AGMLE+ +YLPVN NW +Y +S + +L EMK LM
Sbjct: 419 QHIFP-SISRCPHPVTFAGMLEMGVSYLPVNQNWGRYLEDSQDVYEELQREMKQSLMTLA 477
Query: 165 DQACSLLHDDKYKDSLWLWDQDWSVKDLKLKK-KANKTLSVDQETEEPEEFYEINKNGED 223
D AC LL DD+YK WLWD +W V++ K KK A K + + E P + + ED
Sbjct: 478 DDACQLLQDDRYKHDPWLWDLEWDVQEFKQKKVAAGKKKNSPKVVETPAAAAPLEQE-ED 536
Query: 224 Q---TEDEFVKR--RRELVEKFKPLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDA 278
+E+E V R VE+ K +T RLP +L G E
Sbjct: 537 PGPPSEEELVGPCPSRLAVERLK---ETVSRLPKRRQHLPGTSEM--------------- 578
Query: 279 VSKQELIHDGISDTSEAWIPGPSLISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYS 338
+ ++W+PG SLIS M++TPKL+ LTW PLH+ HGWGYLVP
Sbjct: 579 -------------SVDSWMPGASLISLQMRVTPKLMGLTWDGFPLHYTEKHGWGYLVPGR 625
Query: 339 TDIKVPDAEN----IPLEQLKQLYNNITKQDNCEANVDNAQNSLRDSVETNISFIDCSKS 394
+ VP +N P ++ +Y +++CE N L ++++ D +
Sbjct: 626 RENLVPQEDNAGPVCPHRAIEGVY-----KEHCEKNSKEQPEYLDGRGADDLAWTDSTVW 680
Query: 395 AKRLEVIANV--------------LDKKKLAEASSTDTSTDDADTPREIG---------- 430
K ++ N+ + + + E S + ++ ++ G
Sbjct: 681 EKVRALVINLHFVALFPYDNENVEVGYRAMEEMDSLENLPEENGVRKQTGVVRRKRQAAD 740
Query: 431 ----------------------------FIKLPHKDGEHLNVGNPLSRDFINKFSDNSLA 462
F KLPHKDG H NVG+P S+DF++K D +L
Sbjct: 741 PHYIPEQSQCHYHHGNGPYSDVDVPGCWFFKLPHKDGNHNNVGSPFSKDFLSKMEDGTLR 800
Query: 463 GVDIG--AKRIIEISRMLSYWRNNHERVKKQFVVWLNKKDLPRRLVENIE-SEGRDYGVI 519
G A R +EI++M+S+WRN H+R+ Q V+WL K +LPR + + + +G YG I
Sbjct: 801 AGRSGTNAARALEINKMISFWRNAHKRISSQMVLWLRKVELPRIVSRHKDFDDGAQYGAI 860
Query: 520 LPQLIVSGTLTRRAVEATWMTASNAVGERVGSELRAMIQAPDGYSIIGADVDSQELWIAS 579
LPQ+I +GT+TRRAVE TW+TASNA +RVGSEL+AM+Q P GY ++GADVDSQELWIA+
Sbjct: 861 LPQVITAGTVTRRAVEPTWLTASNARRDRVGSELKAMVQVPPGYHLVGADVDSQELWIAA 920
Query: 580 VIGDSYCAKEHGATPLGWMTLSGQKSNATDMHSITAKAVGISREHAKIINYARIYGAGER 639
V+G+++ A HG T GWMTL G+KS TD+HS TA AVGISREHAK+ NY RIYGAG+
Sbjct: 921 VLGEAHFAGMHGCTAFGWMTLQGKKSQGTDLHSRTADAVGISREHAKVFNYGRIYGAGQA 980
Query: 640 FAERLLKQFNPEMSKSDAKSKARKMYTLTKGKKLYRLKDGHLEELIKRVYSKYEAREVCS 699
FAERLL QFN +S+++A KA++MY+LTKG + Y L + E L+K + + E E S
Sbjct: 981 FAERLLMQFNHRLSQTEADRKAKQMYSLTKGVRRYHLSE-EGEWLVKELGIEVEREENGS 1039
Query: 700 AYNTSVDKI---------------FDKPQWYGGTESAMFNRLEEIATSLQPVTPFLNCRL 744
+ +I +K W GGTES MFN+LE IA S QP TP L CR+
Sbjct: 1040 VSLQELRRITRLASQCSRRKKWDLVEKRLWSGGTESDMFNKLESIAHSAQPATPVLGCRI 1099
Query: 745 SRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLVCMRWLVSR---DTRFVISIHDEIR 801
SRALEP + + +FI +R+NW VQS AVD+LHL+LV M+WL D RF ISIHDE+R
Sbjct: 1100 SRALEPKAVGN-EFITSRVNWAVQSSAVDYLHLILVAMKWLCQEHDIDGRFCISIHDEVR 1158
Query: 802 YLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIPLSISFFSGVEIDKVLRKESDNDCK 861
YLV E++Y K D+P S++FFS V+ID+ LRKE DC
Sbjct: 1159 YLVSSEDRYRACAGA----------ADHKPAHQDLPQSVAFFSSVDIDQCLRKEVSMDCM 1208
Query: 862 TPSNPYGLCKGYGIPLGEILDIYQTIDKANGVI 894
TPSNP G+ + YGIP GE LD+YQ I+ NG +
Sbjct: 1209 TPSNPTGMERRYGIPPGEALDVYQIINITNGSL 1241
>gi|426248702|ref|XP_004023438.1| PREDICTED: LOW QUALITY PROTEIN: DNA polymerase subunit gamma-1 [Ovis
aries]
Length = 1227
Score = 649 bits (1673), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/962 (40%), Positives = 526/962 (54%), Gaps = 170/962 (17%)
Query: 6 WTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLATFEV 65
W ++SS+N+L++V+ LY + DI N+ +LM YCA+D AT
Sbjct: 311 WLDISSVNNLADVHGLY------------------VGDIRENFQDLMQYCAQDVWAT--- 349
Query: 66 IQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLAGML 125
+EV Q PLFLER PHPVTLAGML
Sbjct: 350 -----------------------------------YEVFQQQLPLFLERCPHPVTLAGML 374
Query: 126 ELSTAYLPVNNNWVKYFNESCQTFNDLNV-------EMKSLLMDKCDQACSLLHDDKYKD 178
E+ +YLPVN NW +Y E+ T+ +L E KS LM + + C LL ++YK+
Sbjct: 375 EMGVSYLPVNQNWERYLAEAQGTYEELQRDTGGPPGERKSSLMARANAPCQLLSGERYKE 434
Query: 179 SLWLWDQDWSVKDL---------KLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEF 229
WLWD +W V++ + + A L V+ + P + + G E+EF
Sbjct: 435 DPWLWDLEWDVQEFKQKKAKKGKRREPAAASKLPVEG-ADAPGDPRDQEDPGPPSEEEEF 493
Query: 230 VK--RRRELVEKFKPLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHD 287
+ R +E+ + T + LP +L G+P WYRKLC +
Sbjct: 494 QRGVTARTCLEQLR---GTTELLPQRPQHLPGHPGWYRKLCPR----------------- 533
Query: 288 GISDTSEAWIPGPSLISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTD--IKVPD 345
+ D AW PGPSL+S M++TPKL++LTW PLH+ HGWGYLVP D +VP
Sbjct: 534 -LDDP--AWTPGPSLLSLQMRVTPKLMALTWDGFPLHYSEQHGWGYLVPGRRDNLAQVP- 589
Query: 346 AENIP--------------------LEQLKQLYNNITKQDNCEANVDNAQNSLRDSVETN 385
A + P LEQ KQ + D E + + +++ +VE
Sbjct: 590 AGSAPTSAGVACPHTAIESLYRKHCLEQGKQQLEP-PRADLAEEFLLSDSSAMWQTVE-E 647
Query: 386 ISFIDCSKSAKRLEVIANVLDKKKLAEASSTDTST------------DDADTPREIGFIK 433
+ ++ AK +E + + LA ++ +D D P F K
Sbjct: 648 LGCLEVEAEAK-MENSREAVPGQPLAPTAAGGPKASQPAYHHGNGPYNDVDIP-GCWFFK 705
Query: 434 LPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIG--AKRIIEISRMLSYWRNNHERVKKQ 491
LPHKDG NVG+ SL G R +EI++M+S+WRN H+R+ Q
Sbjct: 706 LPHKDGNSCNVGS---------XEAGSLQAGPGGRQGPRALEINKMISFWRNAHKRISSQ 756
Query: 492 FVVWLNKKDLPRRLVE--NIESEGRDYGVILPQLIVSGTLTRRAVEATWMTASNAVGERV 549
VVWL + LPR + N + EGR YG ILPQ++ +GT+TRRAVE TW+TASNA +RV
Sbjct: 757 MVVWLPRSVLPRAVTRHANYDEEGR-YGAILPQVVTAGTITRRAVEPTWLTASNARPDRV 815
Query: 550 GSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATD 609
GSEL+AM+QAP GY ++GADVDSQELWIA+V+GD++ A HG+T +L+G+KS T+
Sbjct: 816 GSELKAMVQAPPGYVLVGADVDSQELWIAAVLGDAHFAGMHGSTSKA-ASLAGRKSRGTE 874
Query: 610 MHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTK 669
+HS TA VGISREHAKIINY RIYGAG+ FAERLL QFN +++ +A KA++MY +TK
Sbjct: 875 LHSKTAATVGISREHAKIINYGRIYGAGQPFAERLLMQFNHRLTRQEAAEKAQQMYAVTK 934
Query: 670 GKKLYRLKD------GHLEELIKRVYSKYEA--------REVCSAYNTSVDKIFDKPQWY 715
G + YRL D L+ + R + + RE ++ + W
Sbjct: 935 GLRRYRLSDEGEWLVKELDLPVDRTEDGWVSLKDLRKIQREASKKSRWKKWEVVAERAWI 994
Query: 716 GGTESAMFNRLEEIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFL 775
GGTES MFN+LE IATS P TP L CR+SRALEP + +F+ +R+NWVVQS AVD+L
Sbjct: 995 GGTESEMFNKLESIATSDIPSTPVLGCRISRALEPCAVR-GEFMTSRVNWVVQSSAVDYL 1053
Query: 776 HLMLVCMRWLVSR---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLD 832
HLMLV M+WL D RF ISIHDE+RYLV +E++Y ALAL +TNLLTR KL
Sbjct: 1054 HLMLVAMKWLFEEFAIDGRFCISIHDEVRYLVREEDRYRAALALQITNLLTRCMFAHKLG 1113
Query: 833 MTDIPLSISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKANG 892
+ D+P S++FFS V+ID+ LRKE DCKTPSNP G+ + YGIP GE LDIYQ I+ G
Sbjct: 1114 LNDLPQSVAFFSTVDIDQCLRKEVTMDCKTPSNPTGMERRYGIPQGEALDIYQIIELTKG 1173
Query: 893 VI 894
+
Sbjct: 1174 SL 1175
>gi|119622451|gb|EAX02046.1| polymerase (DNA directed), gamma, isoform CRA_b [Homo sapiens]
Length = 1168
Score = 640 bits (1651), Expect = e-180, Method: Compositional matrix adjust.
Identities = 367/879 (41%), Positives = 491/879 (55%), Gaps = 126/879 (14%)
Query: 6 WTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLATFEV 65
W ++SS+NSL+EV++LY G L+K R +FV+G+++DI N+ +LM YCA+D AT
Sbjct: 347 WLDISSVNSLAEVHRLYVGGPPLEKEPRELFVKGTMKDIRENFQDLMQYCAQDVWATH-- 404
Query: 66 IQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLAGML 125
EV Q PLFLER PHPVTLAGML
Sbjct: 405 ------------------------------------EVFQQQLPLFLERCPHPVTLAGML 428
Query: 126 ELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDKYKDSLWLWDQ 185
E+ +YLPVN NW +Y E+ T+ +L EMK LMD + AC LL ++YK+ WLWD
Sbjct: 429 EMGVSYLPVNQNWERYLAEAQGTYEELQREMKKSLMDLANDACQLLSGERYKEDPWLWDL 488
Query: 186 DWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQT-------EDEFVK--RRREL 236
+W +++ K KK ++ P E + DQ E+EF + R
Sbjct: 489 EWDLQEFKQKKAKKVKKEPATASKLPIEGAGAPGDPMDQEDLGPCSEEEEFQQDVMARAC 548
Query: 237 VEKFKPLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAW 296
++K K T + LP +L G+P WYRKLC + + D AW
Sbjct: 549 LQKLK---GTTELLPKRPQHLPGHPGWYRKLCPR------------------LDDP--AW 585
Query: 297 IPGPSLISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTD--IKVPDAENI----- 349
PGPSL+S M++TPKL++LTW PLH+ HGWGYLVP D K+P +
Sbjct: 586 TPGPSLLSLQMRVTPKLMALTWDGFPLHYSERHGWGYLVPGRRDNLAKLPTGTTLESAGV 645
Query: 350 --PLEQLKQLY---------NNITKQDNCEAN----VDNAQ--------NSLRDSVETNI 386
P ++ LY + Q+ A DN+ + L E +
Sbjct: 646 VCPYRAIESLYRKHCLEQGKQQLMPQEAGLAEEFLLTDNSAIWQTVEELDYLEVEAEAKM 705
Query: 387 SFIDCSKSAKRLEVIANVLDKKKLAEASSTDTSTDDADTPREIGFIKLPHKDGEHLNVGN 446
+ + + L + A K + +D D P F KLPHKDG NVG+
Sbjct: 706 ENLRAAVPGQPLALTARGGPKDTQPSYHHGNGPYNDVDIP-GCWFFKLPHKDGNSCNVGS 764
Query: 447 PLSRDFINKFSDNSLAGVDIGAK--RIIEISRMLSYWRNNHERVKKQFVVWLNKKDLPRR 504
P ++DF+ K D +L GA R +EI++M+S+WRN H+R+ Q VVWL + LPR
Sbjct: 765 PFAKDFLPKMEDGTLQAGPGGASGPRALEINKMISFWRNAHKRISSQMVVWLPRSALPRA 824
Query: 505 LVE--NIESEGRDYGVILPQLIVSGTLTRRAVEATWMTASNAVGERVGSELRAMIQAPDG 562
++ + + EG YG ILPQ++ +GT+TRRAVE TW+TASNA +RVGSEL+AM+QAP G
Sbjct: 825 VIRHPDYDEEGL-YGAILPQVVTAGTITRRAVEPTWLTASNARPDRVGSELKAMVQAPPG 883
Query: 563 YSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMHSITAKAVGISR 622
Y+++GADVDSQELWIA+V+GD++ A HG T GWMTL G+KS TD+HS TA VGISR
Sbjct: 884 YTLVGADVDSQELWIAAVLGDAHFAGMHGCTAFGWMTLQGRKSRGTDLHSKTATTVGISR 943
Query: 623 EHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKGKKLYRLKDGHLE 682
EHAKI NY RIYGAG+ FAERLL QFN +++ +A KA++MY TKG + YRL D E
Sbjct: 944 EHAKIFNYGRIYGAGQPFAERLLMQFNHRLTQQEAAEKAQQMYAATKGLRWYRLSD-EGE 1002
Query: 683 ELIKRVYSKYE---------------AREVCSAYNTSVDKIFDKPQWYGGTESAMFNRLE 727
L++ + + RE ++ + W GGTES MFN+LE
Sbjct: 1003 WLVRELNLPVDRTEGGWISLQDLRKVQRETARKSQWKKWEVVAERAWKGGTESEMFNKLE 1062
Query: 728 EIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLVCMRWLVS 787
IATS P TP L C +SRALEP S +F+ +R+NWVVQS AVD+LHLMLV M+WL
Sbjct: 1063 SIATSDIPRTPVLGCCISRALEP-SAVQEEFMTSRVNWVVQSSAVDYLHLMLVAMKWLFE 1121
Query: 788 R---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLT 823
D RF ISIHDE+RYLV +E++Y ALAL +TNLLT
Sbjct: 1122 EFAIDGRFCISIHDEVRYLVREEDRYRAALALQITNLLT 1160
>gi|390345718|ref|XP_003726393.1| PREDICTED: LOW QUALITY PROTEIN: DNA polymerase subunit gamma-1-like
[Strongylocentrotus purpuratus]
Length = 1435
Score = 636 bits (1640), Expect = e-179, Method: Compositional matrix adjust.
Identities = 371/894 (41%), Positives = 510/894 (57%), Gaps = 126/894 (14%)
Query: 5 SWTNVSSLNSLSEVYKLYCE-GKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLATF 63
+W SS N+L++VY LY + G LDKT R+ FV GS+ DI ++ +LMTYCA+D AT
Sbjct: 372 AWLAESSPNNLADVYSLYSDDGSTLDKTKRDTFVHGSMADIRADFQSLMTYCAQDVAATH 431
Query: 64 EVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLAG 123
+ VI L P+F +RFPHPVT A
Sbjct: 432 K--------------------------------------VISKLLPMFSDRFPHPVTFAA 453
Query: 124 MLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDKYKDSLWLW 183
MLE+ AYLP+N NW +Y ++ +TF++L EMK LM + AC++ H DKY++ WLW
Sbjct: 454 MLEMGQAYLPINQNWERYLRDAQETFDNLQQEMKQSLMHIANDACNMHHQDKYREDPWLW 513
Query: 184 DQDWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRRELVEKFKPL 243
+ DWSV D +L+K T+ + + ++ ++ E +K + E+E + + E + +
Sbjct: 514 ELDWSVDDYRLRK----TIPLSERAKKKKKDEECSKEKVESEEEENEEVKEETC--VEDV 567
Query: 244 MQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIPGPSLI 303
+ T R+P + ++ GYP W+R+LC K D W PGPSLI
Sbjct: 568 LSTAARIPKVNQHMTGYPVWFRELCPKKSHVD--------------------WSPGPSLI 607
Query: 304 STSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTDIKVPD----AENIPLEQLKQLYN 359
S+ +ITPKLL LTW PLH+ HGWGYLVP D + + PL + +
Sbjct: 608 SSQTRITPKLLRLTWDGYPLHYTIKHGWGYLVPGKPDSRYQQRTEPGPSFPLNLQDMMSS 667
Query: 360 NITKQDNCEANVDNAQNSLRDSVETNISFIDCSKSAKRLEVIANVLDKKKLAEASSTDTS 419
KQ + ++ D+ + R TN S S+SA + S
Sbjct: 668 RQEKQSSTQS--DDVPSDSR----TNESSAKTSRSAP----------------SHSGRLP 705
Query: 420 TDDADTPREIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSL-AGVDIGAKRIIEISRML 478
D + P F KLPHKDG NVGNPL++DF+NK D +L +G A RI+EI++ +
Sbjct: 706 VKDVNIP-GCWFYKLPHKDGADSNVGNPLAKDFLNKVEDGTLGSGGGAQANRILEINKFI 764
Query: 479 SYWRNNHERVKKQFVVWLNKKDLPRRLVENIE-SEGRDYGVILPQLIVSGTLTRRAVEAT 537
S+WRN +R+ Q VV L DLP + N + E YG I+P++I +GT+TRRAVE T
Sbjct: 765 SFWRNAQKRISSQMVVHLEGGDLPLSVRRNPDYDEDGFYGAIIPRVITAGTVTRRAVEPT 824
Query: 538 WMTASNAVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGW 597
W+TASNA +RVGSEL++MIQ P GY +GADVDSQELWIA+++GD A HG T W
Sbjct: 825 WLTASNARTDRVGSELKSMIQCPPGYHFVGADVDSQELWIAALVGDKNFAGFHGCTAFSW 884
Query: 598 MTLSGQKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDA 657
M L G+K+ TDMHS+TA VGISR+ AK+INY RIYGAGE+FA RLL QFN +++ +A
Sbjct: 885 MMLQGKKNEGTDMHSMTASTVGISRDDAKVINYGRIYGAGEKFAMRLLIQFNHRLTQDEA 944
Query: 658 KSKARKMYTLTKGKKLYRL-----------------KDG--HLEELIKRVYSKYEAREVC 698
+ KAR +Y TKG++LYRL DG LEEL K + K + +E
Sbjct: 945 RQKARDIYIATKGRRLYRLSATGQSLAEQLDLDAEESDGWVTLEEL-KILSKKAQIKEXV 1003
Query: 699 SAYNTSVDKIFDKPQWYGGTESAMFNRLEEIATSLQPVTPFLNCRLSRALEPVSEDDSKF 758
Y +I D +W GG+ESAMFN LE+IA S P TP L C +SRAL+P + ++ +F
Sbjct: 1004 KKY-----EITDGRKWEGGSESAMFNGLEDIAQSENPRTPVLQCSISRALQPDTVNN-EF 1057
Query: 759 IQTRINWVVQSGAVDFLHLMLVCMRWLVSR---DTRFVISIHDEIRYLVPDEEKYETALA 815
+ +R+NWVVQS AVD+LHLMLVCMRWL D RF ISIHDE+RYLV E++Y ALA
Sbjct: 1058 LTSRVNWVVQSSAVDYLHLMLVCMRWLFEMYNIDGRFCISIHDEVRYLVKSEDRYRAALA 1117
Query: 816 LHVTNLLTRAFCIKKLDMTDIPL---SISFFSGVEIDKVLRKESDNDCKTPSNP 866
L +TNLLTRA + M D+P +I+ ++I ++L+ + S+P
Sbjct: 1118 LQITNLLTRAVFAYNMGMNDLPQGMKTINTGEALDIYEILKLTKNGSLTRTSSP 1171
>gi|443695500|gb|ELT96390.1| hypothetical protein CAPTEDRAFT_18002 [Capitella teleta]
Length = 1112
Score = 622 bits (1604), Expect = e-175, Method: Compositional matrix adjust.
Identities = 364/911 (39%), Positives = 494/911 (54%), Gaps = 166/911 (18%)
Query: 6 WTNVSSLNSLSEVYKLYCEGK-VLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLATFE 64
W + +SLNSL+ VY+ Y + LDK+ R+ FV+G ++++ N+ LM YCA D AT +
Sbjct: 323 WIDDTSLNSLNAVYRFYFPHRDPLDKSSRDTFVKGRMQEVRENFQELMGYCASDVAATTD 382
Query: 65 VIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLAGM 124
V +AL+P FLERFPHPVTLAGM
Sbjct: 383 --------------------------------------VFKALWPQFLERFPHPVTLAGM 404
Query: 125 LELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDKYKDSLWLWD 184
LE+ + +LPVN +W KY N + + +L E + +LM + A + D Y++ +WLWD
Sbjct: 405 LEMGSTFLPVNADWFKYINSAETKYAELQKEQQKMLMTAAEDALNFAVDQNYRNDVWLWD 464
Query: 185 QDWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRRELVEKFKPLM 244
DWSVK ++ K + L+ N+ GE+
Sbjct: 465 LDWSVKKVRTKVADFRPLT--------------NRQGEE--------------------- 489
Query: 245 QTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIPGPSLIS 304
+ YL P+WYR LC + E+ + + GPS IS
Sbjct: 490 -------AKAPYLPDAPQWYRDLCPR------------EI------EVARGHQAGPSKIS 524
Query: 305 TSMQITPKLLSLTWKSMPLHFIRGHGWGYLVP---YSTDIKVP----------------- 344
T M++TPKLL L W P+H+ HGWGYLVP + ++++
Sbjct: 525 TLMRVTPKLLRLVWDGFPVHYSDKHGWGYLVPKAPHERELEMSLWEQEEEGEEKKSSKKL 584
Query: 345 DAENIPLEQLKQLYNNITKQDNCEANVDNAQNS-LRDSVETNISFIDCSKSAKR-LEVIA 402
A++ PLE K++ E+ V Q SV + + + S+ R +
Sbjct: 585 TAKDFPLE----------KRERKESLVAEGQRGRYSHSVNSRVRYFSLQTSSPREFKRKE 634
Query: 403 NVLDKKKLAEASSTDTSTDDADTPREIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLA 462
V D D F KLPHKDG+ VGNPL++ F+ K D L
Sbjct: 635 EVFD-----------------DVVPGASFYKLPHKDGKGKRVGNPLAKAFLAKLEDGCLR 677
Query: 463 GV-DIGAKRIIEISRMLSYWRNNHERVKKQFVVWLNKKDLPRRLVENIESEGRDYGVILP 521
+ A+ I+ S + SYW+ N ER+K Q VV D+ ++E GVILP
Sbjct: 678 CLYGPQAEAILHHSNICSYWKMNKERIKGQMVV-----DVTPEHSHSLEGAHAFQGVILP 732
Query: 522 QLIVSGTLTRRAVEATWMTASNAVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVI 581
+++ +GT+TRRAVEATW+TASNA +R+GSEL+AMI++P G+ +GADVDSQELWIASV+
Sbjct: 733 KVVTAGTVTRRAVEATWLTASNAYADRIGSELKAMIRSPPGFHFVGADVDSQELWIASVL 792
Query: 582 GDSYCAKEHGATPLGWMTLSGQKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFA 641
GD+Y A HG+T LGWM L G K +ATDMHS+TA VGISR+ AK+ NY RIYGAG +FA
Sbjct: 793 GDAYFAGVHGSTALGWMMLQGNKKDATDMHSMTASLVGISRDQAKVFNYGRIYGAGVKFA 852
Query: 642 ERLLKQFNPEMSKSDAKSKARKMYTLTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAY 701
++LL QFN +++ +A +KAR MY TKG+K L +R A
Sbjct: 853 KQLLMQFNHRLTEEEAAAKARLMYARTKGRK--------ERSLGQRSLCLGHACRCRFRR 904
Query: 702 NTSVDKIFDKPQWYGGTESAMFNRLEEIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQT 761
S D + + W GG+ES MFN+LE IA S P TP L C +S+ALEP + DS F+ +
Sbjct: 905 ADSDDSDYKEALWSGGSESHMFNQLESIAQSDVPRTPVLGCTISKALEPRNV-DSDFMAS 963
Query: 762 RINWVVQSGAVDFLHLMLVCMRWLVSR---DTRFVISIHDEIRYLVPDEEKYETALALHV 818
RINWVVQS AVD+LHLMLVCMRWL+ R D RF ISIHDE+RYLV E+KY ALAL +
Sbjct: 964 RINWVVQSSAVDYLHLMLVCMRWLLDRYAIDARFSISIHDEVRYLVRSEDKYRAALALQI 1023
Query: 819 TNLLTRAFCIKKLDMTDIPLSISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLG 878
TNLLTR+ +L D+PLS++FFS V++D LRKE DC TPSNP GL GYGI G
Sbjct: 1024 TNLLTRSMFAHQLKFNDLPLSVAFFSAVDLDVCLRKEVGMDCVTPSNPEGLRVGYGIEHG 1083
Query: 879 EILDIYQTIDK 889
+ L+I + ++K
Sbjct: 1084 QALNIQEILEK 1094
>gi|198433586|ref|XP_002125927.1| PREDICTED: similar to GK24652 [Ciona intestinalis]
Length = 1122
Score = 612 bits (1578), Expect = e-172, Method: Compositional matrix adjust.
Identities = 357/924 (38%), Positives = 515/924 (55%), Gaps = 147/924 (15%)
Query: 3 DESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLAT 62
D W ++ + N+L EV+K YC GK LDK R++FV G+++D+ N+ LM YCAKD AT
Sbjct: 306 DNDWVSMGTTNALKEVHKFYC-GKTLDKELRDVFVTGNIKDVRENFQELMWYCAKDVQAT 364
Query: 63 FEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLA 122
+ V+ L PLF +RFPHPVT A
Sbjct: 365 --------------------------------------YNVLAKLTPLFFDRFPHPVTFA 386
Query: 123 GMLELSTAYLPVNNNWVKYFNESCQ-TFNDLNVEMKSLLMDKCDQACSLLHDDKYKDSLW 181
GMLE+ YLPVNNNW +Y SCQ +N LN+E++ L AC ++KYK W
Sbjct: 387 GMLEMGQMYLPVNNNWFRYI-RSCQDQYNSLNLELEKHLTGLASDACHYAVNEKYKTDKW 445
Query: 182 LWDQDWSVKDLKLKKKANKTLSVDQETEEPEEFY--EINKNGED-QTEDEFVKRRRELVE 238
L D DW+ + KL K K ++ + + Y ++ N E+ + + +++ R+ ++
Sbjct: 446 LCDLDWTTRPYKLLTKPRKGWVAKEKPDLKVKSYLLPLDYNTEELKFLGKSIRKERKKLD 505
Query: 239 KFKPLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIP 298
+ L +T +RLP+ ++ G P+WY +LCV +KD + W P
Sbjct: 506 LIEKLNETANRLPLVKPHMPGAPKWYSELCV----PEKD----------------QNWKP 545
Query: 299 GPSLISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTDIKVPDAENIPLEQLKQLY 358
G +L+ST ++TP+LL L W+ PL+ ++ +GWGYL P D P
Sbjct: 546 GATLLSTLTRVTPRLLRLMWQGCPLYHVKDYGWGYLCP---DQTAP-------------- 588
Query: 359 NNITKQDNCEANVDNAQNSLRDSVETNISFIDCSKSAKRLEVIANVLDKKKLAEASSTDT 418
VE + D K EV +K+ E S T
Sbjct: 589 ----------------------PVEKKVEDEDLLK-----EVDQESWNKQ---EVQSNHT 618
Query: 419 STDDADT-PREIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVD-IGAKRIIEISR 476
++ + P F +LPH +G NVG+PLSRDFI+ L+ + + A R +EI++
Sbjct: 619 PAENIEGLPDGYTFHRLPHAEGAGKNVGSPLSRDFISHVESGLLSSYNPLDALRCLEINK 678
Query: 477 MLSYWRNNHERVKKQFVVWL-NKKDLPRRLVENIESEGRD----YGVILPQLIVSGTLTR 531
+ SYWR++ +RV Q VV + N K RR N +E + Y I+PQ IV G ++R
Sbjct: 679 ITSYWRSSQKRVLNQIVVEVANDK---RRDCNNTPNEFNNKDMAYSAIVPQAIVCGAVSR 735
Query: 532 RAVEATWMTASNAVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHG 591
RAVE W+TASN +R+GSEL+AM+QAP G+ +GADVDSQELWIAS++GD+ AKEHG
Sbjct: 736 RAVERVWLTASNPQLDRIGSELKAMVQAPPGFCFVGADVDSQELWIASLLGDASSAKEHG 795
Query: 592 ATPLGWMTLSGQKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPE 651
T L WMTL G K TD+HS TA ++GISR+ AK+ NY R+YGAG++ + R L QFN +
Sbjct: 796 CTALSWMTLRGNKKEGTDLHSTTAASIGISRDQAKVFNYGRMYGAGKKSSLRSLMQFNKD 855
Query: 652 MSKSDAKSKARKMYTLTKGKKLYRLKDGHL-----------EELIKRVYSKYE------- 693
+S+ + +K K+Y +TKG+ Y+L L E + Y+ ++
Sbjct: 856 LSREECIAKVNKLYGITKGEVQYKLSRDALWIIQKTGIELNSEAMTSGYASFDDVTLIQN 915
Query: 694 -AREVCSAYNTSVDK--IFDKPQWYGGTESAMFNRLEEIATSLQPVTPFLNCRLSRALEP 750
A E S Y +++ + +W+GG ES MFN++EEI+ S P TP L+C++SRALEP
Sbjct: 916 VANEA-SNYTARINRNDLVCGRRWHGGIESHMFNKVEEISNSKTPKTPALDCKISRALEP 974
Query: 751 VSEDDSKFIQTRINWVVQSGAVDFLHLMLVCMRWLVSR---DTRFVISIHDEIRYLVPDE 807
+ + F+ TR+NWVVQS AVD+LHL+LV MRWL+ + D RFV+SIHDE+RY+ E
Sbjct: 975 -GKVNGNFVTTRMNWVVQSSAVDYLHLLLVSMRWLIEKYKLDCRFVLSIHDEVRYMSSYE 1033
Query: 808 EKYETALALHVTNLLTRAFCIKKLDMTDIPLSISFFSGVEIDKVLRKESDNDCKTPSNPY 867
+++TALAL ++NLLTR+ KL M D+PL ++FFS +E+D V+RK +D+DC TPSN
Sbjct: 1034 HRHKTALALQISNLLTRSMFAYKLGMDDLPLGVAFFSCIEVDSVVRKSADDDCVTPSNSE 1093
Query: 868 GLCKGYGIPLGEILDIYQTIDKAN 891
GL YGIPLGE D+ + + N
Sbjct: 1094 GLSARYGIPLGESYDVNEILKATN 1117
>gi|196012971|ref|XP_002116347.1| hypothetical protein TRIADDRAFT_64268 [Trichoplax adhaerens]
gi|190580938|gb|EDV21017.1| hypothetical protein TRIADDRAFT_64268 [Trichoplax adhaerens]
Length = 1146
Score = 604 bits (1557), Expect = e-170, Method: Compositional matrix adjust.
Identities = 352/918 (38%), Positives = 502/918 (54%), Gaps = 143/918 (15%)
Query: 6 WTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLATFEV 65
W +S +SL+++Y LY LDK+ +I ++GS+ DI++N+ LM YCA D AT V
Sbjct: 324 WAKLSCPSSLADIYTLYTNN-TLDKSPVDILIKGSMRDIKDNFQTLMEYCATDVYATHVV 382
Query: 66 IQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLAGML 125
++ ++ LFL R PHPV+ AGML
Sbjct: 383 --------------------------------------LKNVYKLFLLRCPHPVSFAGML 404
Query: 126 ELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDKYKDSLWLWDQ 185
E+S+ +LPV+ +W Y N T+ DL E+ +LL D AC LL +D+++D WLW
Sbjct: 405 EMSSIFLPVDESWQYYLNTVEYTYQDLENELNTLLKHLADDACHLLRNDRFRDDPWLWSL 464
Query: 186 DWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRRELVEKFKPLMQ 245
+W++K LK +N + + + E+ +N +D+ +E +K ++E + + +
Sbjct: 465 NWNIKRNSLKSLSNISKKLLKTITG-----ELTENIDDKILEERLKLQKERLHAKRGSQK 519
Query: 246 TKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIPGPSLIST 305
+ GYP+WY LC + S+ + W P IS
Sbjct: 520 S------------GYPDWYADLCPPLYIK---------------SELNSKWRSSPVNISP 552
Query: 306 SMQITPKLLSLTWKSMPLHFIRGHGWGYLVP----------YSTDIKVPDAENIPLEQ-- 353
+ +I P LL L + + P+++ + +GWGYLV Y T K EQ
Sbjct: 553 TKRIVPLLLRLAYNNNPVYYDKKYGWGYLVLRQDAIADETLYGTSHKEKCGNGDTDEQKL 612
Query: 354 ----------LKQLYNNITKQDNCEANVDNAQNSLRDSVETNISFIDCSKSAKRLEVIAN 403
LK+ NN C +D +Q + ++ LE N
Sbjct: 613 QFPVRSWLKILKERKNNSHDGQACIKALDTSQVDYFNPIDV------------ELEPRRN 660
Query: 404 VLDKKKLAEASSTDTSTDDADTPREIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLA- 462
+ KL + D D F K+PHKDG HL G+PLS+D++ ++ D ++
Sbjct: 661 LSQGDKLLGPYTIDIPGVD--------FYKIPHKDGSHLRCGSPLSKDYLKQYEDGTITS 712
Query: 463 -GVDIGAKRIIEISRMLSYWRNNHERVKKQFVVWLNKKDLPRRLVENIESEG-RDYGVIL 520
G DI AKR +E+ MLSYW+N H+RV+ QFVV+ ++ + + + + + YG IL
Sbjct: 713 FGSDI-AKRTVELKLMLSYWKNAHDRVRNQFVVYYKHDEIADSIRNHSQFKPLQKYGAIL 771
Query: 521 PQLIVSGTLTRRAVEATWMTASNAVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASV 580
P + +GT+TRRAVEATW+TASNA RVGSEL+AMI+AP GY +GADVDSQELWIA++
Sbjct: 772 PPVAPAGTVTRRAVEATWLTASNAKANRVGSELKAMIRAPPGYHFVGADVDSQELWIAAL 831
Query: 581 IGDSYCAKEHGATPLGWMTLSGQKSNATDMHSITAKAVGISREHAKIINYARIYGAGERF 640
D+ + HG T +GWMTL G+KS TD+HS TA+ VGISR+ AK NY RIYGAG +
Sbjct: 832 YADARFGRTHGCTAIGWMTLQGKKSQGTDLHSKTAETVGISRDQAKTFNYGRIYGAGLNY 891
Query: 641 AERLLKQFNPEMSKSDAKSKARKMYTLTKGKKLYRLK-----------------DGHLEE 683
A+RL++QFNP M+ DA KA+ +Y TKG +Y+L D ++
Sbjct: 892 AQRLMRQFNPSMTLEDASDKAKILYASTKGITIYKLTRKGKKILQKLDPDTILDDDWIDT 951
Query: 684 LIKRVYSKYEAREVCSAYNTSVDKIFDKPQWYGGTESAMFNRLEEIATSLQPVTPFLNCR 743
+ K+ + +Y S K QW GG+ES MFN LE IA S +P TP L CR
Sbjct: 952 TGHEILRKHLRGKKLDSYIKSKSK-----QWIGGSESEMFNALEAIALSEKPKTPILECR 1006
Query: 744 LSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLVCMRWLVSR---DTRFVISIHDEI 800
+S+ALEP ++ ++ +RINWVVQS AVD+LHL+LVCMRWL + + RF ISIHDE+
Sbjct: 1007 ISQALEPKVVGNA-YLPSRINWVVQSSAVDYLHLILVCMRWLFEKYNINGRFCISIHDEV 1065
Query: 801 RYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIPLSISFFSGVEIDKVLRKESDNDC 860
RYLV E+++ ALAL +TNLLTRA K+ + D+PLS++FFS V++D VLRKE D DC
Sbjct: 1066 RYLVKSEDRFRAALALQITNLLTRAMFAHKIKIYDLPLSVAFFSAVDVDTVLRKEPDMDC 1125
Query: 861 KTPSNPYGLCKGYGIPLG 878
KTP+NP GL KGY +P G
Sbjct: 1126 KTPTNPLGLEKGYNVPPG 1143
>gi|391338736|ref|XP_003743711.1| PREDICTED: DNA polymerase subunit gamma-1-like [Metaseiulus
occidentalis]
Length = 1008
Score = 597 bits (1538), Expect = e-167, Method: Compositional matrix adjust.
Identities = 348/905 (38%), Positives = 493/905 (54%), Gaps = 174/905 (19%)
Query: 4 ESWTNVSSLNSLSEVYKLYCEGKV-LDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLAT 62
ESW++VSSLN+L++V+KLY EG L+K R F +G+ +D+ ++ NLM YC KD LA
Sbjct: 243 ESWSDVSSLNNLADVHKLYREGDARLEKEIRKTFEKGTSDDVRADFQNLMRYCFKDVLA- 301
Query: 63 FEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLA 122
T V+ + PLF ER PH +L
Sbjct: 302 -------------------------------------TRSVLLEVLPLFKERSPHKASLF 324
Query: 123 GMLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDKYKDSLWL 182
G++E+ T+YLPV+NNW++Y ES +ND+ E++S+L +++C H+ ++ +WL
Sbjct: 325 GLMEMLTSYLPVDNNWLRYIKESENAYNDVVSEIRSILHRVANESCRKFHNGAFRRDVWL 384
Query: 183 WDQDWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRRELVEKFKP 242
DWS K++KL+K + P ++ K
Sbjct: 385 QGLDWSAKEIKLRKTSQIP---------PPALGSLS---------------------LKN 414
Query: 243 LMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIPGPSL 302
+Q + R +L GYP WY +LC KP S D + + W+ GP
Sbjct: 415 CLQARQR------FLCGYPLWYIELCTKPPS---DIIQYLD------------WVHGPWN 453
Query: 303 ISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVP----YSTDIKV---PDAENIPLEQLK 355
ST + P LL + W PLHF GWGYLVP ++ IK P E P ++
Sbjct: 454 TSTQKRCIPSLLKIMWDGYPLHFRMEDGWGYLVPETRERASQIKSHESPLWEEFPRDEYA 513
Query: 356 QLYN---------NITKQDNCEANVDNAQNSLRDSVETNISFIDCSKSAKRLEVIANVLD 406
+L ++ ++ E DN + S+ ET I + +V + L
Sbjct: 514 KLIEKSRGETIDFSLLRKSIEEETTDNVEESIWAMRETMI---------EHKKVKSGALG 564
Query: 407 KKKLAEASSTDTSTDDADTPREIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDI 466
K+ E SS + I F KLPHK G LNVGNPLS+DFI KF N L +
Sbjct: 565 KEHPGEKSSASPESY-LKLSDGILFRKLPHKKGNDLNVGNPLSKDFIGKFEGNVLRSDEY 623
Query: 467 -GAKRIIEISRMLSYWRNNHERVKKQFVVWLNKKDLPRRLVENIESEGRDYGVILPQLIV 525
A ++++S+ SYW+N +R+K+Q VVW ++ D ILP++I
Sbjct: 624 RSANVLLKMSKETSYWKNARDRIKEQMVVWTSE----------------DRAAILPKIIP 667
Query: 526 SGTLTRRAVEATWMTASNAVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSY 585
+GT++RRAVE TW+TASNA +R+GSE +AM++AP+GY +GADVDS+ELWIAS+IGD+
Sbjct: 668 AGTVSRRAVEKTWLTASNAKTDRIGSEFKAMVRAPEGYHFVGADVDSEELWIASLIGDAS 727
Query: 586 CAKEHGATPLGWMTLSGQKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLL 645
HG T GWMTL G+KS+ TDMHS TA +R+ AKI+NYAR+YGAG++FA R L
Sbjct: 728 FGGIHGNTAFGWMTLQGKKSDGTDMHSRTAATAHCTRDQAKILNYARLYGAGQKFAARSL 787
Query: 646 KQFNPEMSKSDAKSKARKMYTLTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSV 705
K F+P + ++ AK AR M++ TKG YR + G
Sbjct: 788 KDFDPALDEASAKKLARCMFSETKG---YR-RGG-------------------------- 817
Query: 706 DKIFDKPQWYGGTESAMFNRLEEIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINW 765
+W+GGTES MFN+LE A+S +P TPFL R+SRALEP D++++ +R+NW
Sbjct: 818 -------KWHGGTESHMFNKLEAHASSAEPRTPFLRSRISRALEPAVV-DTQYMMSRVNW 869
Query: 766 VVQSGAVDFLHLMLVCMRWLVSR---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLL 822
+VQS AVD+LHLML+ MR+L + D R V++IHDE+R++V E +Y ALALH+TNL
Sbjct: 870 IVQSSAVDYLHLMLLSMRYLFDKFRIDGRLVVTIHDEVRFMVRSEHRYRAALALHITNLH 929
Query: 823 TRAFCIKKLDMTDIPLSISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILD 882
RA+ + M D+P ++FFS V++DK LRKE +DC TPSNP+GL GYGI GE LD
Sbjct: 930 VRAYFASSVGMRDLPYGVAFFSAVDVDKALRKEVGDDCVTPSNPHGLKLGYGIGEGEALD 989
Query: 883 IYQTI 887
IY+T+
Sbjct: 990 IYKTV 994
>gi|291227793|ref|XP_002733868.1| PREDICTED: DNA-directed DNA polymerase gamma-like [Saccoglossus
kowalevskii]
Length = 1315
Score = 568 bits (1465), Expect = e-159, Method: Compositional matrix adjust.
Identities = 328/757 (43%), Positives = 445/757 (58%), Gaps = 95/757 (12%)
Query: 195 KKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRRELVEKFKPLMQTKDRLPVNS 254
K+ ++ SV + T + E I + + + EDE +R E + ++ +K+ L
Sbjct: 583 KRSYSQDASVSKPTFKTSELVAIAR--KRKREDE---KRLEAENRINDILASKNLLYKRK 637
Query: 255 SYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIPGPSLISTSMQITPKLL 314
+++GYP WYR LC + D D W PGPSLI++ +Q+TPKLL
Sbjct: 638 QHMVGYPNWYRDLCPR-FKVDSD------------------WKPGPSLITSQVQVTPKLL 678
Query: 315 SLTWKSMPLHFIRGHGWGYLVP-----YSTD----IKVPDAENI-------PLEQLKQLY 358
LTW PL+ HGWGYLVP S D DAE++ P+ L++L
Sbjct: 679 RLTWDGFPLYRDDKHGWGYLVPGRQHNMSRDKQDATSQGDAESVDKKMVEFPIRSLRKLM 738
Query: 359 NNITKQDNCEANVD-NAQNSLRDSVET----NISFIDCSKSAKRLEVIANVLDKKKLAEA 413
+I K + E D ++ + +E N S D + K + KK+L
Sbjct: 739 KDIPKFSDSEKEDDLMTEDEILSKIEELGNGNGSNWDSEEMLK--------MTKKRLCRD 790
Query: 414 SST----DTSTDDADTPREIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVD-IGA 468
S + + +D D P F K+PHKDG H VGNPL++DF++K D +L+ + A
Sbjct: 791 SPSWHVGNGPHNDVDIP-GCWFFKMPHKDGSHKKVGNPLAKDFLSKMEDGTLSSFGGVQA 849
Query: 469 KRIIEISRMLSYWRNNHERVKKQFVVWLNKKDLPRRLVENIE-SEGRDYGVILPQLIVSG 527
RI+EIS+M+S+WRN +R+ Q V+ L + +LP+ + ++E E +YG ILP+++ +G
Sbjct: 850 NRILEISKMISFWRNAQDRISSQMVISLERSELPKTVTRHVEYDEDNNYGAILPKVVTAG 909
Query: 528 TLTRRAVEATWMTASNAVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCA 587
T+TRR VE TW+TASNA +RVGSEL+AM+QAP GY +GADVDSQELWIAS++GD+ A
Sbjct: 910 TVTRRMVEPTWLTASNARPDRVGSELKAMVQAPPGYHFVGADVDSQELWIASLLGDARFA 969
Query: 588 KEHGATPLGWMTLSGQKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQ 647
HG T GWM L G K TD+HS TA + ISR+ AK+ NY RIYGAG+ FA RLL Q
Sbjct: 970 GFHGCTAFGWMNLQGNKLERTDLHSKTADTIDISRDQAKVFNYGRIYGAGQPFAVRLLMQ 1029
Query: 648 FNPEMSKSDAKSKARKMYTLTKGKKLYRLKDGHLEELIKRVYSK---------------- 691
FN MS +A+ KA MY+ TKG K Y+LK+ + E+++++ SK
Sbjct: 1030 FNHRMSVDEARRKASTMYSATKGIKKYKLKED-VREIVRKLLSKKKQSRWITNEELRTLR 1088
Query: 692 -----------YEAREVCSAYNTSVDKIFD---KPQWYGGTESAMFNRLEEIATSLQPVT 737
E E +D FD K +W G+ES MFN+LE IA S +P T
Sbjct: 1089 RRLKYTLEYQYVEDIESNIPLTDLLDYSFDLTEKREWKVGSESEMFNQLESIAMSDEPRT 1148
Query: 738 PFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLVCMRWLVSR---DTRFVI 794
P L CR+SRALEP+S ++ +F+ +RINWVVQS AVD+LHLMLVCMRWL+ + D RF I
Sbjct: 1149 PVLGCRISRALEPMSVNN-EFLTSRINWVVQSSAVDYLHLMLVCMRWLLDKYDIDGRFSI 1207
Query: 795 SIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIPLSISFFSGVEIDKVLRK 854
SIHDE+RYLV +KY A+AL ++NLLTR KL M D+P S++FFS V+ID VLRK
Sbjct: 1208 SIHDEVRYLVNSNDKYRAAMALQISNLLTRCMFAYKLGMLDLPQSVAFFSAVDIDTVLRK 1267
Query: 855 ESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKAN 891
E DCKTPSNP+GL KGYGIP GE LDIY + N
Sbjct: 1268 EVSMDCKTPSNPHGLEKGYGIPEGEALDIYDVLKLTN 1304
Score = 162 bits (411), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 79/187 (42%), Positives = 104/187 (55%), Gaps = 38/187 (20%)
Query: 6 WTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLATFEV 65
W VSS N+L +VY LYC+G LDKT+R +FV GS++DI + + LM+YCA+D AT
Sbjct: 328 WVEVSSPNNLGDVYSLYCDGLALDKTERKVFVTGSIQDIRHQFQELMSYCARDVKATH-- 385
Query: 66 IQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLAGML 125
EV + P++ ERFP+PVT A ML
Sbjct: 386 ------------------------------------EVFSKILPMYFERFPNPVTFAAML 409
Query: 126 ELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDKYKDSLWLWDQ 185
E+S YLPVNNNW +Y NE+ T+ DL EMK LM + +C LLH+D+YK WLW+
Sbjct: 410 EMSQVYLPVNNNWQRYLNETQGTYEDLQKEMKLSLMHLANDSCELLHNDRYKKDPWLWEL 469
Query: 186 DWSVKDL 192
DWS +L
Sbjct: 470 DWSSTEL 476
>gi|2494178|sp|Q92076.1|DPOG1_CHICK RecName: Full=DNA polymerase subunit gamma-1; AltName:
Full=Mitochondrial DNA polymerase catalytic subunit
gi|1405384|gb|AAC60018.1| DNA polymerase gamma [Gallus gallus]
Length = 647
Score = 561 bits (1446), Expect = e-157, Method: Compositional matrix adjust.
Identities = 296/652 (45%), Positives = 396/652 (60%), Gaps = 60/652 (9%)
Query: 294 EAWIPGPSLISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTD-----IKVPDAEN 348
E W+PGPSLIS M++TPKL+ L W PLH+ HGWGYLVP D P+
Sbjct: 2 EGWVPGPSLISLQMRVTPKLMRLAWDGFPLHYSEKHGWGYLVPGRQDNLPAASAEPEGPV 61
Query: 349 IPLEQLKQLYNNITKQDNCEANVDNAQNSLRDSVETNISFIDCSKSAKRLEVIANV-LDK 407
P +++LY Q E + A VE + ++ S +++E ++ + LD
Sbjct: 62 CPHRAIERLYRQHCLQRGQEQPPEEA------GVEDELMVLEGSSMWQKVEELSQLELDM 115
Query: 408 KKLAEASSTDTSTDDA----------------DTPRE------IGFIKLPHKDGEHLNVG 445
++ A + +D + P F KLPHKDG NVG
Sbjct: 116 ERPGRAEQSQMQDEDGLPELVEESSQPSFHHGNGPYNDVNIPGCWFFKLPHKDGNENNVG 175
Query: 446 NPLSRDFINKFSDNSLAGVDIG---AKRIIEISRMLSYWRNNHERVKKQFVVWLNKKDLP 502
+P ++DF+ + D +L +G R +EI++M+S+WRN H+RV Q VVWL K +LP
Sbjct: 176 SPFAKDFLPRMEDGTLRAA-VGRTHGTRALEINKMVSFWRNAHKRVSSQVVVWLKKGELP 234
Query: 503 RRLVEN-IESEGRDYGVILPQLIVSGTLTRRAVEATWMTASNAVGERVGSELRAMIQAPD 561
R + + SE DYG ILPQ++ +GT+TRRAVE TW+TASNA +RVGSEL+AM+Q P
Sbjct: 235 RAVTRHPAYSEEEDYGAILPQVVTAGTITRRAVEPTWLTASNARADRVGSELKAMVQVPP 294
Query: 562 GYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMHSITAKAVGIS 621
GYS++GADVDSQELWIA+V+G+++ A HG T GWMTL G+KS+ TD+HS TA VGIS
Sbjct: 295 GYSLVGADVDSQELWIAAVLGEAHFAGMHGCTAFGWMTLQGKKSDGTDLHSKTAATVGIS 354
Query: 622 REHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKGKKLYRLKDGHL 681
REHAK+ NY RIYGAG+ FAERLL QFN +++ A+ KA++MY +TKG + + L +
Sbjct: 355 REHAKVFNYGRIYGAGQPFAERLLMQFNHRLTQQQAREKAQQMYAVTKGIRRFHLSE-EG 413
Query: 682 EELIKRVYSKYEAREVCSAYNTSVDKIFDKP----------------QWYGGTESAMFNR 725
E L+K + + E + V KI + W GGTES MFN+
Sbjct: 414 EWLVKELELAVDKAEDGTVSAQDVQKIQREAMRKSRRKKKWDVVAHRMWAGGTESEMFNK 473
Query: 726 LEEIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLVCMRWL 785
LE IA S P TP L C +SRALEP +F+ +R+NWVVQS AVD+LHLMLV M+WL
Sbjct: 474 LESIALSASPQTPVLGCHISRALEPAVA-KGEFLTSRVNWVVQSSAVDYLHLMLVSMKWL 532
Query: 786 VSR---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIPLSISF 842
+ RF ISIHDE+RYLV ++++Y ALAL +TNLLTR KL + D+P S++F
Sbjct: 533 FEEYDINGRFCISIHDEVRYLVQEQDRYRAALALQITNLLTRCMFAYKLGLQDLPQSVAF 592
Query: 843 FSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKANGVI 894
FS V+ID+ LRKE +C TPSNP G+ K YGIP GE LDIYQ I+ G +
Sbjct: 593 FSAVDIDRCLRKEVTMNCATPSNPTGMEKKYGIPRGEALDIYQIIEITKGSL 644
>gi|449471644|ref|XP_004176977.1| PREDICTED: DNA polymerase subunit gamma-1 [Taeniopygia guttata]
Length = 979
Score = 533 bits (1372), Expect = e-148, Method: Compositional matrix adjust.
Identities = 294/693 (42%), Positives = 402/693 (58%), Gaps = 86/693 (12%)
Query: 251 PVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIPGPSLISTSMQIT 310
P +L G+P WYRKLC + E W+PGPSLIS M++T
Sbjct: 321 PKRLQHLPGHPGWYRKLCPRLEE--------------------EGWVPGPSLISLQMRVT 360
Query: 311 PKLLSLTWKSMPLHFIRGHGWGYLVPYSTDIKVP------DAENIPLEQLKQLYNNITKQ 364
PKL+ L W PLH+ HGWGYLVP D +P D + P ++ LY +
Sbjct: 361 PKLMRLAWDGFPLHYSEKHGWGYLVPGRQD-NLPTAPVETDGPSCPHRVIEDLY-----R 414
Query: 365 DNCEANVDNAQNSLRDSVETNISFIDCSKSAKRLEVIANVLDKKKLAEASSTDTSTDDAD 424
+C L +VE + +D S ++ + ++ + E S T+ ++
Sbjct: 415 QHCLEKGKEQPPGLEAAVEDELLVMDSSTIWQK---VKEGMEGSLMEELSRTEVDPEEKM 471
Query: 425 TPREIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIG---AKRIIEISRMLSYW 481
+ + + DG NVG+P ++DF+ + D +L +G R +EI++M+S+W
Sbjct: 472 SKADGSLVL----DGNDNNVGSPFAKDFLPQMEDGTLRAA-VGRTHGTRALEINKMISFW 526
Query: 482 RNNHERVKKQFVVWLNKKDLPRRLVENIE-SEGRDYGVILPQLIVSGTLTRRAVEATWMT 540
RN H+R+ Q VVWL K +LPR + + + +E DYG ILPQ++ +GT+TRRAVE TW+T
Sbjct: 527 RNAHKRISSQMVVWLKKGELPRAVTRHPDYNEEDDYGAILPQVVTAGTVTRRAVEPTWLT 586
Query: 541 ASNA--------------------VGERVGSELRAMIQAPDGYSIIGADVDSQELWIASV 580
ASNA +RVGSEL+AM+Q P GY+++GADVDSQELWIA++
Sbjct: 587 ASNARAAPLPWRRRGMCLPVHRVLQADRVGSELKAMVQVPPGYALVGADVDSQELWIAAM 646
Query: 581 IGDSYCAKEHGATPLGWMTLSGQKSNATDMHSITAKAVGISREHAKIINYARIYGAGERF 640
+G++ A HG T GWMTL G+KSN TD+HS TA VGISREHAKI NY RIYGAG F
Sbjct: 647 LGEAQFAGMHGCTAFGWMTLQGKKSNGTDLHSKTAATVGISREHAKIFNYGRIYGAGLPF 706
Query: 641 AERLLKQFNPEMSKSDAKSKARKMYTLTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSA 700
AERLL QFN +++ A+ KA++MY +TKG + + L + E L+ ++ + E S
Sbjct: 707 AERLLMQFNHRLTQQQAREKAQQMYAVTKGIRRFHLSE-EGEWLLSKLDLAVDRAEDGSV 765
Query: 701 YNTSVDKI----------------FDKPQWYGGTESAMFNRLEEIATSLQPVTPFLNCRL 744
V +I ++ W GGTES MFN+LE IA S P TP L C +
Sbjct: 766 SAQDVQRIQREAMKGSRREKKWNVVEQRVWAGGTESEMFNKLESIALSPSPQTPVLGCHI 825
Query: 745 SRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLVCMRWLVSR---DTRFVISIHDEIR 801
SRALEP + +F+ +R+NWVVQS AVD+LHLMLV M+WL + RF ISIHDE+R
Sbjct: 826 SRALEP-AMVKGEFVTSRVNWVVQSSAVDYLHLMLVAMKWLFEEFDINGRFCISIHDEVR 884
Query: 802 YLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIPLSISFFSGVEIDKVLRKESDNDCK 861
YLV +++Y ALAL +TNLLTR KL + D+P S++FFS V+ID+ LRKE +C
Sbjct: 885 YLVQHQDRYRAALALQITNLLTRCMFAYKLGLQDLPQSVAFFSAVDIDQCLRKEVTMNCV 944
Query: 862 TPSNPYGLCKGYGIPLGEILDIYQTIDKANGVI 894
TPSNP G+ K Y IP GE LDIYQ I+ G +
Sbjct: 945 TPSNPMGMEK-YNIPQGEALDIYQIIEITKGSL 976
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 63/168 (37%), Positives = 90/168 (53%), Gaps = 38/168 (22%)
Query: 1 MTDESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTL 60
+T W +VSS+N+L++V+ LY G+ L+K R IFV+G++ DI +N+ L++YCA+D
Sbjct: 160 VTSWDWVHVSSINNLADVHALYVGGEPLEKEAREIFVKGTMADIRSNFQELVSYCARDVQ 219
Query: 61 ATFEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVT 120
AT EV Q PLF+ER PHPVT AGMLE+ +Y
Sbjct: 220 ATHEVFQEQLPLFMERCPHPVTFAGMLEMGVSY--------------------------- 252
Query: 121 LAGMLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQAC 168
LPVN NW +Y N++ + +L EMK LM+ + AC
Sbjct: 253 -----------LPVNGNWNRYLNDAQGIYEELQKEMKKSLMNLANDAC 289
>gi|357620044|gb|EHJ72374.1| DNA polymerase subunit gamma 1, mitochondrial [Danaus plexippus]
Length = 656
Score = 533 bits (1372), Expect = e-148, Method: Compositional matrix adjust.
Identities = 300/703 (42%), Positives = 403/703 (57%), Gaps = 106/703 (15%)
Query: 3 DESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLAT 62
D+ W VSSLN LS+V++LYC G +DK R++FVEG LED++NN+ +LM YCA D +A
Sbjct: 32 DDEWREVSSLNGLSDVHRLYC-GVAIDKQTRDVFVEGCLEDVQNNFQDLMKYCAGDVIA- 89
Query: 63 FEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLA 122
T V++AL PLFLERFPHPVT A
Sbjct: 90 -------------------------------------THNVLRALLPLFLERFPHPVTFA 112
Query: 123 GMLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDKYKDSLWL 182
GMLEL +AYLPVN+NW +Y + + F DL +E + +L K D+AC ++ ++ YK+ W+
Sbjct: 113 GMLELGSAYLPVNSNWSQYLDSADTVFEDLKLESQQILSSKADEACRMMENEGYKEDPWM 172
Query: 183 WDQDWSVKD-------------LKLKKKANKTLSVDQETEE--PEEFYEINKNGEDQTED 227
WDQDWSV+ ++ KK A++ ++ E +E+ + K E T D
Sbjct: 173 WDQDWSVQKLKLKKNATKKKDTIESKKPASEDVNRISSKFELLSDEYVDSLKTNEKVTHD 232
Query: 228 EFVKRRRELVEKFKPLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHD 287
L +KFK L D LPV +L GYP WYRKLC KP D D
Sbjct: 233 -----FENLNKKFKYLYDLGDLLPVKRPFLAGYPAWYRKLCTKP-GKDPD---------- 276
Query: 288 GISDTSEAWIPGPSLISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTDIKVPDAE 347
W G + I+TSMQITPKLL L+W+ PLH ++ GWG+LVPYS I DA+
Sbjct: 277 --------WRAGANNITTSMQITPKLLRLSWEGYPLHHLQSEGWGFLVPYSRHI-AEDAK 327
Query: 348 N--IPLEQLKQLYNNIT-KQDNCEANVDNAQNSLRDSVETNISFIDCSKSAKRLEVIANV 404
+PLE++ ++ +T K D E+ + ++ + + + ++ K + +AN
Sbjct: 328 EPLVPLEKILEICPLMTSKADYVESELHMLPKNVEEDLSRRAYY---ARKKKEEQAVANQ 384
Query: 405 LDKKKLAEASSTDTSTDDADTPREIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGV 464
+ F++LPHKDG VGNPL+RDF+N FS N L+
Sbjct: 385 YHGLGVWCGVQIQGCCH---------FLRLPHKDGPKYKVGNPLARDFLNMFSQNVLSAQ 435
Query: 465 DIGAKRIIEISRMLSYWRNNHERVKKQFVVWLNKKDLPRRLVENIESEGRDYGVILPQLI 524
A++++ RM+SYWRNN ERV Q V L LP+ L GR ILP ++
Sbjct: 436 GNEAEKVLSFGRMMSYWRNNRERVCGQQAVCLPDPALPQHL------RGRGLAAILPLVV 489
Query: 525 VSGTLTRRAVEATWMTASNAVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDS 584
V GTLTRRA E TWMTASNA +RVGSELR+M+ AP GY +GADVDSQELWIA+++GDS
Sbjct: 490 VCGTLTRRASEPTWMTASNAQSDRVGSELRSMVTAPPGYRFVGADVDSQELWIAALLGDS 549
Query: 585 --YCAKEHGATPLGWMTLSGQKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAE 642
C G + GW L+G K TD+HS+TA A G+ R+HAK+INYARIYGAG+ FAE
Sbjct: 550 SLMC----GGSAFGWAVLAGDKRTNTDLHSLTAVAAGVRRDHAKVINYARIYGAGQNFAE 605
Query: 643 RLLKQFNPEMSKSDAKSKARKMYTLTKGKKLYRLKDGHLEELI 685
RLLKQFNP M+ S+AKSKA KM+T TKGK++YRLK+ +E +
Sbjct: 606 RLLKQFNPTMTISEAKSKAAKMFTTTKGKRVYRLKEKFMEGFM 648
>gi|116283963|gb|AAH61472.1| Polg protein [Mus musculus]
Length = 1013
Score = 516 bits (1330), Expect = e-143, Method: Compositional matrix adjust.
Identities = 298/722 (41%), Positives = 402/722 (55%), Gaps = 103/722 (14%)
Query: 6 WTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLATFEV 65
W ++SS N+L++V+ LY G L+K R +FV+GS+ DI N+ +LM YCA+D AT
Sbjct: 329 WMDISSANNLADVHNLYVGGPPLEKEPRELFVKGSMRDIRENFQDLMQYCARDVWAT--- 385
Query: 66 IQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLAGML 125
FEV Q PLFLER PHPVTLAGML
Sbjct: 386 -----------------------------------FEVFQQQLPLFLERCPHPVTLAGML 410
Query: 126 ELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDKYKDSLWLWDQ 185
E+ +YLPVN NW +Y E+ T+ +L EMK LMD + AC LL ++YK+ WLWD
Sbjct: 411 EMGVSYLPVNQNWERYLTEAQNTYEELQREMKKSLMDLANDACQLLSGERYKEDPWLWDL 470
Query: 186 DWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQ------TEDEFVKRRRELVEK 239
+W +++ K KK ++ P E + DQ +E+E ++R +
Sbjct: 471 EWDLQEFKQKKAKKVKKPAS-ASKLPIEGAGPFGDPMDQEDPGPPSEEEELQRSVTAHNR 529
Query: 240 FKPLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIPG 299
+ L T D LP +L G+P WYRKLC + + D AW PG
Sbjct: 530 LQQLRSTTDLLPKRPQHLPGHPGWYRKLCPR------------------LDDP--AWAPG 569
Query: 300 PSLISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTD-IKVPD--------AENIP 350
PSL+S M++TPKL++LTW PLH+ HGWGYLVP D + P A P
Sbjct: 570 PSLLSLQMRVTPKLMALTWDGFPLHYSDSHGWGYLVPGRRDNLTEPPVSPTVESAAVTCP 629
Query: 351 LEQLKQLYNNIT----KQDNCEANVDNAQ-------NSLRDSVETNISFIDCSKSAKR-- 397
++ LY KQ VD A+ +++ +VE + +D AK
Sbjct: 630 YRAIESLYRKHCLEQGKQQLEPQEVDLAEEFLLTDSSAMWQTVE-ELGCLDVEAEAKMEN 688
Query: 398 ------LEVIANVLDKKKLAEASSTDTSTDDADTPREIGFIKLPHKDGEHLNVGNPLSRD 451
L + A K + +D + P F KLPHKDG + NVG P ++D
Sbjct: 689 SGLSQPLVLPAACAPKSSQPTYHHGNGPYNDVNIP-GCWFFKLPHKDGNNYNVGTPFAKD 747
Query: 452 FINKFSDNSLAGVDIGAK--RIIEISRMLSYWRNNHERVKKQFVVWLNKKDLPRRLVEN- 508
F+ K D +L GA R +EI++M+S+WRN H+R+ Q VVWL + LPR + +
Sbjct: 748 FLPKMEDGTLQAGPGGASGPRALEINKMISFWRNAHKRISSQMVVWLPRSALPRVVTRHP 807
Query: 509 -IESEGRDYGVILPQLIVSGTLTRRAVEATWMTASNAVGERVGSELRAMIQAPDGYSIIG 567
+ EG YG ILPQ++ +GT+TRRAVE TW+TASNA +RVGSEL+AM+QAP GY ++G
Sbjct: 808 SFDEEGH-YGAILPQVVTAGTITRRAVEPTWLTASNARPDRVGSELKAMVQAPPGYVLVG 866
Query: 568 ADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMHSITAKAVGISREHAKI 627
ADVDSQELWIA+V+GD++ A HG T GWMTL G+KS TD+HS TA VGISREHAKI
Sbjct: 867 ADVDSQELWIAAVLGDAHFAGMHGCTAFGWMTLQGRKSRGTDLHSKTAATVGISREHAKI 926
Query: 628 INYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKGKKLYRLK-DGHLEELIK 686
NY RIYGAG+ FAERLL QFN +++ +A KA++MY +TKG + YRL DG E L+K
Sbjct: 927 FNYGRIYGAGQSFAERLLMQFNHRLTRQEAAEKAQQMYAVTKGLRRYRLSADG--EWLVK 984
Query: 687 RV 688
++
Sbjct: 985 QL 986
>gi|355712649|gb|AES04419.1| polymerase , gamma [Mustela putorius furo]
Length = 530
Score = 507 bits (1306), Expect = e-141, Method: Compositional matrix adjust.
Identities = 261/489 (53%), Positives = 330/489 (67%), Gaps = 27/489 (5%)
Query: 421 DDADTPREIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAK--RIIEISRML 478
+D D P F KLPHKDG NVG+P ++DF+ K D +L GA R +EI++M+
Sbjct: 45 NDVDVP-GCWFFKLPHKDGSSCNVGSPFAKDFLPKMEDGTLQAGPGGASGPRALEINKMI 103
Query: 479 SYWRNNHERVKKQFVVWLNK---KDLPRRLVE--NIESEGRDYGVILPQLIVSGTLTRRA 533
S+WRN H+R+ Q VVWL + LPR + + + EGR YG ILPQ++ +GT+TRRA
Sbjct: 104 SFWRNAHKRISSQMVVWLPRLPRSALPRAVTRHPDYDEEGR-YGAILPQVVTAGTITRRA 162
Query: 534 VEATWMTASNAVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGAT 593
VE TW+TASNA +RVGSEL+AM+QAP GY ++GADVDSQELWIA+V+GD++ A HG T
Sbjct: 163 VEPTWLTASNARPDRVGSELKAMVQAPPGYVLVGADVDSQELWIAAVLGDAHFAGMHGCT 222
Query: 594 PLGWMTLSGQKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMS 653
GWMTL G+KS TD+HS TA VGISREHAKI NY RIYGAG+ FAERLL QFN ++
Sbjct: 223 AFGWMTLQGRKSRGTDLHSKTAATVGISREHAKIFNYGRIYGAGQPFAERLLMQFNHRLT 282
Query: 654 KSDAKSKARKMYTLTKGKKLYRLKD------GHLEELIKRVYSKYEA--------REVCS 699
+ +A KA++MY +TKG + YRL D L+ + R + + RE
Sbjct: 283 RQEAAEKAQQMYAVTKGLRRYRLSDEGEWLVRELDLPVDRTEDGWVSLQDLRKIQREASR 342
Query: 700 AYNTSVDKIFDKPQWYGGTESAMFNRLEEIATSLQPVTPFLNCRLSRALEPVSEDDSKFI 759
++ + W GGTES MFN+LE IA S P TP L CR+SRALEP S +F+
Sbjct: 343 KSRWKKWEVVAERAWTGGTESEMFNKLESIAMSDTPCTPVLGCRISRALEP-SAVQGEFM 401
Query: 760 QTRINWVVQSGAVDFLHLMLVCMRWLVSR---DTRFVISIHDEIRYLVPDEEKYETALAL 816
+R+NWVVQS AVD+LHLMLV MRWL D RF ISIHDE+RYLV +E++Y ALAL
Sbjct: 402 TSRVNWVVQSSAVDYLHLMLVAMRWLFEEFAIDGRFCISIHDEVRYLVREEDRYRAALAL 461
Query: 817 HVTNLLTRAFCIKKLDMTDIPLSISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIP 876
+TNLLTR KL + D+P S++FFS V+ID+ LRKE DCKTPSNP G+ + YGIP
Sbjct: 462 QITNLLTRCMFAYKLGLNDLPQSVAFFSTVDIDRCLRKEVTMDCKTPSNPTGMERRYGIP 521
Query: 877 LGEILDIYQ 885
GE LDIYQ
Sbjct: 522 QGEALDIYQ 530
>gi|432113564|gb|ELK35850.1| DNA polymerase subunit gamma-1 [Myotis davidii]
Length = 826
Score = 499 bits (1284), Expect = e-138, Method: Compositional matrix adjust.
Identities = 286/665 (43%), Positives = 372/665 (55%), Gaps = 111/665 (16%)
Query: 253 NSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIPGPSLISTSMQITPK 312
++ L+ WYRKLC P D AW PGPSL+S M++TPK
Sbjct: 242 DACQLLSGERWYRKLC--PRLDDP------------------AWTPGPSLLSLQMRVTPK 281
Query: 313 LLSLTWKSMPLHFIRGHGWGYLVPYSTDIKVPDAENIP-LEQLKQL-YNNITKQDNCEAN 370
L++LTW PLHF HGWGYLVP D N+ +E+L L + TK D+ EA
Sbjct: 282 LMALTWDGFPLHFSERHGWGYLVPGRRD-------NLAKVEELGCLEVQDETKTDSSEAA 334
Query: 371 VDNAQNSLRDSVETNISFIDCSKSAKRLEVIANVLDKKKLAEASSTDTSTDDADTPREIG 430
V +L T S+ A + D D P
Sbjct: 335 VPGQPPAL-----TGAGGPTASQPAYH-----------------HGNGPYHDVDIP-GCW 371
Query: 431 FIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAK--RIIEISRMLSYWRNNHERV 488
F KLPHKDG NVG+P ++DF+ K D +L GA R +EI++M+S+WRN H+R+
Sbjct: 372 FFKLPHKDGNSCNVGSPFAKDFLPKMEDGTLQAGPGGASGPRALEINKMISFWRNAHKRI 431
Query: 489 KKQFVVWLNKKDLPRRLVENIE-SEGRDYGVILPQLIVSGTLTRRAVEATWMTASNAVGE 547
Q VVWL + LPR + + + E YG ILPQ++ +GT+TRRAVE TW+TASNA +
Sbjct: 432 SSQMVVWLPRSALPRAVTRHPDYDEENRYGAILPQVVTAGTITRRAVEPTWLTASNARPD 491
Query: 548 RVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNA 607
RVGSEL+AM+QAP GY + G+KS
Sbjct: 492 RVGSELKAMVQAPPGYVL------------------------------------GRKSRG 515
Query: 608 TDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTL 667
TD+HS TA VGISREHAK+ NY RIYGAG+ FAERLL QFN ++ +A KA++MY +
Sbjct: 516 TDLHSKTAATVGISREHAKVFNYGRIYGAGQPFAERLLMQFNHRLTSQEAAEKAQQMYAV 575
Query: 668 TKGKKLYRLKDGHLEELIKRVYSKYE---------------AREVCSAYNTSVDKIFDKP 712
TKG + YRL D E L+++++ E RE + +
Sbjct: 576 TKGLRRYRLSD-EGEWLVRQLHIPVERTEDGCVSLQDLRKVQREASRKSRGKKWNVVAER 634
Query: 713 QWYGGTESAMFNRLEEIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAV 772
W GGTES MFN+LE IAT+ +P TP L CR+SRALEP S +F+ +R+NWVVQS AV
Sbjct: 635 MWTGGTESEMFNKLESIATADEPRTPVLGCRISRALEP-SVAQGEFMTSRVNWVVQSSAV 693
Query: 773 DFLHLMLVCMRWLVSR---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIK 829
D+LHLMLV M+WL D RF ISIHDE+RYLV +E++Y ALAL +TNLLTR
Sbjct: 694 DYLHLMLVAMKWLFEEFAIDGRFCISIHDEVRYLVREEDRYRAALALQITNLLTRCMFAY 753
Query: 830 KLDMTDIPLSISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDK 889
KL + D+P S++FFS V+ID+ LRKE DCKTPSNP G+ + YG+P GE LDIYQ ++
Sbjct: 754 KLGLNDLPQSVAFFSAVDIDRCLRKEVTMDCKTPSNPTGMERRYGVPQGEALDIYQVLEL 813
Query: 890 ANGVI 894
G +
Sbjct: 814 TKGSL 818
Score = 134 bits (338), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 67/175 (38%), Positives = 96/175 (54%), Gaps = 38/175 (21%)
Query: 6 WTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLATFEV 65
W ++SS+N+L++V+ LY G L+K R +FV+GS++D+ +N+ +LM YC++D AT+EV
Sbjct: 120 WLDISSVNNLADVHGLYVGGPPLEKEPRELFVKGSMKDVRDNFQDLMQYCSQDVWATYEV 179
Query: 66 IQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLAGML 125
Q PLFLER PHPVTLAGMLE+ +Y
Sbjct: 180 FQEQLPLFLERCPHPVTLAGMLEMGVSY-------------------------------- 207
Query: 126 ELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDKYKDSL 180
LPVN NW +Y E+ T+ +L EMK LMD + AC LL +++ L
Sbjct: 208 ------LPVNQNWERYLAEAQSTYEELQREMKKSLMDLANDACQLLSGERWYRKL 256
>gi|260813766|ref|XP_002601587.1| hypothetical protein BRAFLDRAFT_124349 [Branchiostoma floridae]
gi|229286886|gb|EEN57599.1| hypothetical protein BRAFLDRAFT_124349 [Branchiostoma floridae]
Length = 1237
Score = 497 bits (1279), Expect = e-137, Method: Compositional matrix adjust.
Identities = 282/710 (39%), Positives = 384/710 (54%), Gaps = 119/710 (16%)
Query: 6 WTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLATFEV 65
W NVSS+N+L +V+ LY G L+K++R++FV+G+L+D+ N + LMTYCA+D A
Sbjct: 320 WLNVSSINNLGDVHVLYTGGPKLEKSERDVFVKGTLQDVRNQFQELMTYCARDVRA---- 375
Query: 66 IQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLAGML 125
T E+ P+FLERFPH VTLAGML
Sbjct: 376 ----------------------------------THEIFSMQLPMFLERFPHAVTLAGML 401
Query: 126 ELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDKYKDSLWLWDQ 185
E+ YLPVN+NW +Y ++ TF +L EMK LM + AC L+H+D+Y++ WLW+
Sbjct: 402 EMGQCYLPVNSNWERYLRDAEDTFQELQKEMKLSLMHLANDACQLMHNDRYQEDPWLWEL 461
Query: 186 DWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQ-------------------TE 226
DWS ++L LKK+ + + + E GEDQ
Sbjct: 462 DWSTQELTLKKETSAKKKKIKVEKTDE--------GEDQRVKPERKSTKKKKKKGKKEEA 513
Query: 227 DEFVKRRRELVEKFKPLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIH 286
+E + ++ + +++T DRLP ++ GYP WYR LC K
Sbjct: 514 EEAEDQEETEEDRIQRVLETADRLPKIKRHMPGYPAWYRDLCPK---------------- 557
Query: 287 DGISDTSEAWIPGPSLISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTDI----- 341
+ AW PGP+LIS ++TPKLL L W PLH+ GWGYLVP TD
Sbjct: 558 -----VTGAWSPGPNLISAQARVTPKLLRLRWDGFPLHYEASQGWGYLVPGRTDNMNGTD 612
Query: 342 KVPDAENIPLEQLKQLYNNITKQDNCEANVDNAQNSLRDSVETNISFIDCSKSAKRLEVI 401
K N P + + Y KQ D D + + D L
Sbjct: 613 KQDGERNFPTKAVLDAYKEYLKQRR-----DTRDKEPLDQRYSGWANDDMWDHIMDLSQK 667
Query: 402 ANVLDKKKLAEASSTDTST------------------DDADTPREIGFIKLPHKDGEHLN 443
A ++ EA D+S +D D P + F +LPHKDG
Sbjct: 668 AKGEGNGEMEEAPIYDSSVLYSNGESAPEFHRGAGPYNDVDLP-GVWFFRLPHKDGAKFK 726
Query: 444 VGNPLSRDFINKFSDNSLAGVDIG-AKRIIEISRMLSYWRNNHERVKKQFVVWLNKKDLP 502
VGNPL++D++NK D +L G A R +E+++M+S+WRN +RV Q VVWL KK+LP
Sbjct: 727 VGNPLAKDYLNKMEDGTLTAAAGGPANRTLEVNKMVSFWRNARDRVMSQMVVWLKKKELP 786
Query: 503 RRLVEN--IESEGRDYGVILPQLIVSGTLTRRAVEATWMTASNAVGERVGSELRAMIQAP 560
R + N E EG YG I+P+++ +GT+TRRAVE TW+TASNA +RVGSEL+A++QAP
Sbjct: 787 RIVSRNPDYEEEG-SYGAIIPRVVTAGTVTRRAVEPTWLTASNARPDRVGSELKAIVQAP 845
Query: 561 DGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMHSITAKAVGI 620
GY IGADVDSQELWIA+++GD+ A HG T GWMTL G+KS+ TD+HS TA +GI
Sbjct: 846 PGYHFIGADVDSQELWIAAILGDANFAGFHGCTSFGWMTLQGKKSSGTDLHSKTASTIGI 905
Query: 621 SREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKG 670
SR+HAK+ NY RIYGAG+ FAERLL QFN M++ +A KA++MY TKG
Sbjct: 906 SRDHAKVFNYGRIYGAGQPFAERLLLQFNHRMTQEEAGEKAKQMYAATKG 955
Score = 196 bits (499), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 87/144 (60%), Positives = 113/144 (78%), Gaps = 3/144 (2%)
Query: 751 VSEDDSKFIQTRINWVVQSGAVDFLHLMLVCMRWLVSR---DTRFVISIHDEIRYLVPDE 807
+S D +KF+ +R+NWVVQS AVD+LHLMLVCMRWL ++ D RF ISIHDE+RYLV E
Sbjct: 1072 ISRDHAKFVTSRVNWVVQSSAVDYLHLMLVCMRWLFNKYNIDGRFCISIHDEVRYLVQSE 1131
Query: 808 EKYETALALHVTNLLTRAFCIKKLDMTDIPLSISFFSGVEIDKVLRKESDNDCKTPSNPY 867
++Y ALAL +TNLLTR+ +L M D+P S++FFS V++D V+RKE + DCKTPSNP+
Sbjct: 1132 DRYRAALALQITNLLTRSMFAYRLGMNDLPQSVAFFSAVDVDTVMRKEVNMDCKTPSNPH 1191
Query: 868 GLCKGYGIPLGEILDIYQTIDKAN 891
GL +GYGIP G+ LDIYQ ++K N
Sbjct: 1192 GLTRGYGIPPGDALDIYQILEKTN 1215
Score = 163 bits (412), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 83/183 (45%), Positives = 120/183 (65%), Gaps = 9/183 (4%)
Query: 448 LSRDFINKFSDNSL--AGVDIGAKRIIEISRMLSYWRNNHERVKKQFVVWLNKKDLPRRL 505
+SRD F+ + AG + +++ + ++ E+ K+ + ++ P
Sbjct: 905 ISRDHAKVFNYGRIYGAGQPFAERLLLQFNHRMTQ-EEAGEKAKQMYAATKGVRENP--- 960
Query: 506 VENIESEGRDYGVILPQLIVSGTLTRRAVEATWMTASNAVGERVGSELRAMIQAPDGYSI 565
+ E EG YG I+P+++ +GT+TRRAVE TW+TASNA +RVGSEL+A++QAP GY
Sbjct: 961 --DYEEEG-SYGAIIPRVVTAGTVTRRAVEPTWLTASNARPDRVGSELKAIVQAPPGYHF 1017
Query: 566 IGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMHSITAKAVGISREHA 625
IGADVDSQELWIA+++GD+ A HG T GWMTL G+KS+ TD+HS TA +GISR+HA
Sbjct: 1018 IGADVDSQELWIAAILGDANFAGFHGCTSFGWMTLQGKKSSGTDLHSKTASTIGISRDHA 1077
Query: 626 KII 628
K +
Sbjct: 1078 KFV 1080
>gi|391338760|ref|XP_003743723.1| PREDICTED: DNA polymerase subunit gamma-1-like [Metaseiulus
occidentalis]
Length = 1066
Score = 459 bits (1180), Expect = e-126, Method: Compositional matrix adjust.
Identities = 283/917 (30%), Positives = 455/917 (49%), Gaps = 156/917 (17%)
Query: 6 WTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLATFEV 65
W VSSLN+L +VY+LYC + L+K+ R+ FV G+ +D+ ++ +LM YC
Sbjct: 261 WNAVSSLNNLGDVYRLYC-NRELEKSARDTFVTGTSDDVRKDFQHLMRYC---------- 309
Query: 66 IQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLAGML 125
+ D LAT V+ L P+F E+F HP T G+L
Sbjct: 310 ----------------------------VLDVLATRNVLCKLLPMFREKFAHPATFFGVL 341
Query: 126 ELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDKYKDSLWLWDQ 185
E TAYLP+N NW KY + + +++L+ ++L ++ C++L D Y+ WLWD
Sbjct: 342 ETLTAYLPINENWRKYLDNCGKIYDELDSRSSAILNRIANETCAMLEGDSYRSDPWLWDL 401
Query: 186 DWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRRELVEKFKPLMQ 245
DWS ++ K + G DE
Sbjct: 402 DWSTRETKSAAGIGGS------------------EGASANNDE----------------- 426
Query: 246 TKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIPGPSLIST 305
+ S + P+W+R L K S +E H SE+W S
Sbjct: 427 -------SQSSQVRKPKWFRDLNEKQDS--------EEARHPAWE--SESWS-----FSI 464
Query: 306 SMQITPKLLSLTWKSMPLHFIRGHGWGYLVP-------YSTDIKVPDAEN--------IP 350
+ PKLL +TW P+H+ GWGYL+P +S+D E+ P
Sbjct: 465 RKRCVPKLLRITWDGYPVHYHSELGWGYLIPAEPDHPTWSSDGDASSRESPTEGKGGFFP 524
Query: 351 LEQLKQLYNNITKQDNCEANVDNAQ---------NSLRDSVETNISFIDCSKSAKRLEVI 401
LE +L + ++ + + +A + L D + + + D S+ A+R
Sbjct: 525 LESYLKLIDEHRAREQTDESPSSAPGPEEAEEKFSDLGDFSKLDNDWKDVSQEAERYSTT 584
Query: 402 ANVLDKKKLAEASSTDTSTDDADTPREIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSL 461
+ K ++ D R + F KLP G N G+P+SR I K+ +
Sbjct: 585 SEKTKLKTNYPQTTFDIGL------RGVRFKKLPRSPGSAYNAGSPMSRSTIEKYWGTRM 638
Query: 462 AGV---DIGAKRIIEISRMLSYWRNNHERVKKQFVVWLNKKDLPRRLVENIESEGRDYGV 518
+ DI +++I + SYW+ R+ Q VW N E++G
Sbjct: 639 SSRNPEDIA--ELLDIMKHTSYWKTVRNRISDQVAVW------------NSENQG----A 680
Query: 519 ILPQLIVSGTLTRRAVEATWMTASNAVGERVGSELRAMIQAPDGYSIIGADVDSQELWIA 578
ILP+++ +GT+ R+ V+ TW T S+A +R+GSE +AM+QAP+G+ +G DS+ELWIA
Sbjct: 681 ILPRILPAGTIYRKPVDRTWSTTSHAAKDRIGSEFKAMVQAPEGFHFVGDSPDSKELWIA 740
Query: 579 SVIGDSYCAKEHGATPLGWMTLSGQKSNATDMHSITAKAVGISREHAKIINYARIYGAGE 638
+++GD+ CAK HG+T LGW + G +H TA+ + + + AKI++ R++G G+
Sbjct: 741 ALLGDADCAKMHGSTALGWRVIHGGLLCDRGLHQETARIIDCTEKQAKILDLVRLHGGGQ 800
Query: 639 RFAERLLKQFNPEMSKSDAKSKARKMYTLTKGKKLYRLKDGHLEELIKRVYSKYEAREVC 698
++L + P MS ++A + + + LTKG++ + + + + R Y+ R +
Sbjct: 801 GLLTKILMELMPNMSNAEAFLRTKDLVKLTKGERQWPVTKS--KPVSVRAVGPYQ-RALT 857
Query: 699 SAYNTSVDKIFDKPQWYGGTESAMFNRLEEIATSLQPVTPFLNCRLSRALEPVSEDDSKF 758
A S F+ W GG+ES FNRLE+IA+ +P TPFL+ L+RALEP +SK+
Sbjct: 858 FANGKS---WFETKLWTGGSESHFFNRLEQIASESRPATPFLSAGLTRALEPAVLYNSKY 914
Query: 759 IQTRINWVVQSGAVDFLHLMLVCMRWLVSR---DTRFVISIHDEIRYLVPDEEKYETALA 815
R+NWV+QS A DF HL+L+ R L + + R V++ ++E++Y+V E +Y+ AL
Sbjct: 915 AMARMNWVLQSSAADFQHLILLSTRDLFNEFDIEGRLVLTANNEVKYMVASEHRYKAALT 974
Query: 816 LHVTNLLTRAFCIKKLDMTDIPLSISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGI 875
LH++NL R+F +++ + D+P +++F V +D+VLR++ ++DC TPSNP GL + YGI
Sbjct: 975 LHISNLFVRSFFAERVGLDDLPYAVAFCPHVTVDRVLRQDVEDDCVTPSNPRGLRETYGI 1034
Query: 876 PLGEILDIYQTIDKANG 892
GE L+IY+ ID+ G
Sbjct: 1035 APGEKLNIYEVIDRLAG 1051
>gi|2494181|sp|Q01941.1|DPOG_PICPA RecName: Full=DNA polymerase gamma; AltName: Full=Mitochondrial DNA
polymerase catalytic subunit
gi|1236527|gb|AAB17118.1| DNA polymerase gamma [Komagataella pastoris]
Length = 1012
Score = 446 bits (1148), Expect = e-122, Method: Compositional matrix adjust.
Identities = 295/894 (32%), Positives = 423/894 (47%), Gaps = 236/894 (26%)
Query: 1 MTDESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTL 60
+ D W N SSLNSL V + YC+ K L K RN F +++ N+ LM YCAKD
Sbjct: 284 LEDNPWINKSSLNSLERVAEFYCKIK-LKKDIRNSFATEDPDELRGNFDELMQYCAKDVF 342
Query: 61 ATFEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVT 120
AT + V Q ++P F + PHPVT
Sbjct: 343 ATGK--------------------------------------VFQKVYPKFKKLIPHPVT 364
Query: 121 LAGMLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHD--DKYKD 178
LA + ++S+ LP W Y S + + + ++ L C++ L D +++
Sbjct: 365 LAALKDISSCILPTTTKWEDYIETSERLYQESRRMIEKNLHVICEETVKLKDDPTKPWEN 424
Query: 179 SLWLWDQDWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRRELVE 238
WL DW++ ++L KK EI+KN
Sbjct: 425 DPWLSQLDWTIDPIRLTKKG-----------------EIHKN------------------ 449
Query: 239 KFKPLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIP 298
+LP GYP WY++L VK EL
Sbjct: 450 ---------QKLP-------GYPNWYKQLIVK-----------NEL-------------- 468
Query: 299 GPSLISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTDIKVPDAENIPLEQLKQLY 358
++T + +P LL L W PL++I+ GW + KVP + E+L
Sbjct: 469 ---KLTTKTRTSPLLLKLAWNGNPLYWIQTQGWCF--------KVPKNKTEEYEKL---- 513
Query: 359 NNITKQDNCEANVDNAQNSLRDSVETNISFIDCSKSAKRLEVIANVLDKKKLAEASSTDT 418
+F+ ++ KKL+E ++
Sbjct: 514 ----------------------------NFV--------------MVSLKKLSEDPGFES 531
Query: 419 STDDADTPREIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEISRML 478
A+ + F+K+PH DG V N +++ + F L AK ++++
Sbjct: 532 IR--AEDLKNFTFVKVPHPDGPSARVTNCMTKSCLGFFEKGFLNSQYPLAKDALQMAVAS 589
Query: 479 SYWRNNHERVKKQFVVWLNKKDLPRRLVENIESEGRDYGVILPQLIVSGTLTRRAVEATW 538
SYW ++ ER+ QFVV+ + D G ILPQ+I GT+TRRAVE TW
Sbjct: 590 SYWTSSRERIMNQFVVFED-----------------DMGYILPQIIPMGTITRRAVENTW 632
Query: 539 MTASNAVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWM 598
+TASNA R+GSEL+++I+AP GY +GADVDS+ELWIAS+IGDS K HG T +GWM
Sbjct: 633 LTASNAKKNRLGSELKSLIEAPKGYCFVGADVDSEELWIASLIGDS-VFKIHGGTAIGWM 691
Query: 599 TLSGQKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAK 658
TL G K+ TD+HS TAK +GISR AKI NY RIYGAG +F LLK+FNP +S ++AK
Sbjct: 692 TLEGTKNEGTDLHSKTAKILGISRNEAKIFNYGRIYGAGIKFTTTLLKKFNPALSDAEAK 751
Query: 659 SKARKMYTLTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQWYGGT 718
+ A +YT TKG + +Y+ + + WYGG+
Sbjct: 752 ATANALYTATKG-----------------ISGRYDKKSI----------------WYGGS 778
Query: 719 ESAMFNRLEEIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLM 778
ES +FNRLE IA P TP L ++ L+ + + F+ +RINW +QS VD+LHL+
Sbjct: 779 ESIIFNRLEAIAEMAHPKTPVLGAGITAPLQKANLSTNNFLTSRINWAIQSSGVDYLHLL 838
Query: 779 LVCMRWLVSR---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTD 835
++ M +L+ D R I++HDEIRYLV +E+K+ A AL ++NL TRA ++L + +
Sbjct: 839 IISMDYLIKLFDIDARLCITVHDEIRYLVKEEDKFRAAYALQISNLWTRAMFCQQLGINE 898
Query: 836 IPLSISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDK 889
+P S +FFS V++D VLRKE D DC TPSNP IP G+ LDIYQ + +
Sbjct: 899 VPQSCAFFSAVDLDFVLRKEVDLDCVTPSNP------DPIPCGKSLDIYQLLQQ 946
>gi|317150544|ref|XP_001824106.2| DNA polymerase gamma [Aspergillus oryzae RIB40]
Length = 1107
Score = 446 bits (1147), Expect = e-122, Method: Compositional matrix adjust.
Identities = 301/891 (33%), Positives = 419/891 (47%), Gaps = 218/891 (24%)
Query: 3 DESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLAT 62
+E W SS+NSL +V K +C+ +DK R+ F E S E I L+ YCA D T
Sbjct: 298 EELWVGRSSVNSLRDVAKFHCD-VTIDKAQRDDFGELSREGILEKLDELLDYCAADVAIT 356
Query: 63 FEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLA 122
V + + FP FLE PHPV+
Sbjct: 357 HRVYKKV--------------------------------------FPNFLEVCPHPVSFG 378
Query: 123 GMLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLL-HDDKYKDSLW 181
+ LS+ LPVN W Y + T++ +++ L++ CD+A + D Y D W
Sbjct: 379 ALRHLSSVILPVNQTWKDYLTNAEATYHQRLDDVQRKLVELCDEALKVKDQPDVYMDDPW 438
Query: 182 LWDQDWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRRELVEKFK 241
L DWS +++K+ K K +P R + K
Sbjct: 439 LRQLDWSGQEIKMAKGKKKG--------DPP---------------------RPAARQKK 469
Query: 242 PLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIPGPS 301
P G P+WY+ +L SD +
Sbjct: 470 P----------------GMPKWYK-----------------DLFATNTSDIN-------- 488
Query: 302 LISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTDIKVPDAENIPLEQLKQLYNNI 361
++ + P LL L+W PL + +GW + +P +Q+K+ N
Sbjct: 489 -LTVRSRTAPILLKLSWDGYPLTWSDKYGWTF--------------KVPRDQVKKFENQ- 532
Query: 362 TKQDNCEANVDNAQNSLRDSVETNISFIDCSKSAKRLEVIANVLDKKKLAEASSTDTSTD 421
V+ + ++K+AE D
Sbjct: 533 -------------------------------------PVVLCDMTEEKIAELR------D 549
Query: 422 DADTPREIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEISRMLSYW 481
D R + KLPHKDG NPL++ ++ F +L+ AK +E++ SYW
Sbjct: 550 D----RRHVYFKLPHKDGPQARCVNPLAKGYMQYFERGTLSSQYALAKEALEMNASCSYW 605
Query: 482 RNNHERVKKQFVVWLNKKDLPRRLVENIESEGRDYGVILPQLIVSGTLTRRAVEATWMTA 541
+ +R+ Q VV+ K ++ + N ES G ILPQ+I GT+TRRAVE TW+TA
Sbjct: 606 ISARDRIMGQMVVY--KDEVQKSASNNAESRT---GFILPQVIPMGTITRRAVENTWLTA 660
Query: 542 SNAVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLS 601
SNA RVGSEL+AMI+AP GY +GADVDSQELWIAS+IGD+ + HG +G+MTL
Sbjct: 661 SNAKENRVGSELKAMIKAPPGYVFVGADVDSQELWIASLIGDAQF-QIHGGNAIGFMTLE 719
Query: 602 GQKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKA 661
G K+ TDMHS TAK +GISR AK+ NY RIYGAG +FA LL+QFNP MS+ + A
Sbjct: 720 GSKAAGTDMHSRTAKILGISRNDAKVFNYGRIYGAGVKFAASLLRQFNPSMSEKQTQEVA 779
Query: 662 RKMYTLTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQWYGGTESA 721
K+Y TKG + R R+ S D P W GGTES
Sbjct: 780 TKLYQETKGARTTR-----------RILS-------------------DSPFWRGGTESF 809
Query: 722 MFNRLEEIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLVC 781
+FN+LEE A +P TP L ++ AL + F+ +RINW +QS VD+LHL+++
Sbjct: 810 VFNKLEEFADQERPRTPTLGAGITEALMRRFINRGSFMTSRINWAIQSSGVDYLHLLIIA 869
Query: 782 MRWLVSR---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIPL 838
M +L+ R R I++HDEIRYLV DE+KY ALAL V N+ TRA +++ + D+P
Sbjct: 870 MDYLIRRFNIAARLAITVHDEIRYLVKDEDKYRAALALQVANVWTRAMFSQQVGINDLPQ 929
Query: 839 SISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDK 889
S ++FS V+ID VLRKE D DC TPS+P + IP GE LDI Q ++K
Sbjct: 930 SCAYFSAVDIDHVLRKEVDMDCVTPSHP------HKIPHGESLDIVQLLEK 974
>gi|430814166|emb|CCJ28567.1| unnamed protein product [Pneumocystis jirovecii]
Length = 1076
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 298/893 (33%), Positives = 442/893 (49%), Gaps = 208/893 (23%)
Query: 2 TDESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLA 61
T+E W + SS NSL EV KL+C K +K RN+F + + ++N + LM YCA D
Sbjct: 329 TEELWMSNSSSNSLQEVAKLHCHIKP-NKYIRNLFEKLDRKGVKNQLNMLMNYCANDVDI 387
Query: 62 TFEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTL 121
T ++ +++ FP FLE PHP +
Sbjct: 388 THKIYKSI--------------------------------------FPSFLELCPHPASF 409
Query: 122 AGMLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLH-DDKYKDSL 180
+L++S+++LPV+ +W Y S + F +L+ + L+ + A + +D K+
Sbjct: 410 GALLKISSSFLPVDKSWESYTARSEKIFQNLSRSVHERLIKLVENALDQKNNEDTIKNDP 469
Query: 181 WLWDQDWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRRELVEKF 240
WL DW+ K +++ D++T E +R ++
Sbjct: 470 WLKQLDWNTKPIRI--------VTDKKTGE----------------------KRLAKKQK 499
Query: 241 KPLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIPGP 300
KP G+P WY+KL ++K ++
Sbjct: 500 KP----------------GFPNWYKKL----FPSNKSEIN-------------------- 519
Query: 301 SLISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTDIKVPDAENIPLEQLKQLYNN 360
I+ +I P LL L W+ PL + +GW + V I+ +EN
Sbjct: 520 --ITVRSRIAPLLLRLNWEGYPLVWSDKYGWTFQVTNQEAIEKFLSEN------------ 565
Query: 361 ITKQDNCEANVDNAQNSLRDSVETNISFIDCSKSAKRLEVIANVLDKKKLAEASSTDTST 420
+I C+ E S DT
Sbjct: 566 ---------------------------YILCN------------------MEEESIDTLR 580
Query: 421 DDADTPREIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEISRMLSY 480
++ + K+P+K+G G+PLS+ +I F D L A+ + ++ SY
Sbjct: 581 NNTSA----SYFKIPNKNGPSGRCGSPLSKSYIKAFEDGLLNSEISYAREALNMNAACSY 636
Query: 481 WRNNHERVKKQFVVWLNKKDLPRRLVENIESEGRDYGVILPQLIVSGTLTRRAVEATWMT 540
W ++ ER+ Q V+W N+ D+ + +N G+ILP +I GT+TRRAVE TW+T
Sbjct: 637 WISSRERIMSQLVIWDNEMDIGLKNTQN------TLGIILPHIIPMGTITRRAVENTWLT 690
Query: 541 ASNAVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTL 600
ASN R+GSEL+AMI+AP GY +GADVDS+ELWIAS+ GDS K HGAT +GWMTL
Sbjct: 691 ASNIKRNRIGSELKAMIKAPSGYKFVGADVDSEELWIASLFGDSQF-KMHGATAIGWMTL 749
Query: 601 SGQKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSK 660
G +S TDMHS+TAK +GISR +AKI NY+RIYGAG RFA +LL++FNP++S+ AK
Sbjct: 750 EGTRSAETDMHSVTAKILGISRSNAKIFNYSRIYGAGIRFAIQLLQRFNPKLSEKQAKEI 809
Query: 661 ARKMYTLTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQ-WYGGTE 719
A K+Y+ TKGKK + I + SK ++ S Y F + + W+GGTE
Sbjct: 810 ATKLYSSTKGKKSW----------ITHILSKENEKKKLSKY-------FPRKRFWHGGTE 852
Query: 720 SAMFNRLEEIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLML 779
S +FN LEEIA P TP L C +++AL + + FI +RINWV+QS VD+LHL++
Sbjct: 853 SYVFNMLEEIANQEIPQTPVLGCSITKALLLKNINPGGFITSRINWVIQSSGVDYLHLLI 912
Query: 780 VCMRWLVSR---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDI 836
+ M +L+ + R V+++HDEIRYLV +E+KY ALAL V+NL TRA +KL + D+
Sbjct: 913 ISMEYLIKTYKINARLVLTVHDEIRYLVYEEDKYILALALQVSNLWTRAMFSQKLGINDV 972
Query: 837 PLSISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDK 889
P + + + + +KE++ DC TPSNP IP GE L+IYQ ++K
Sbjct: 973 P-QVFYIICKNLLLISKKETNMDCITPSNP------EKIPHGESLNIYQLLEK 1018
>gi|391873167|gb|EIT82241.1| DNA polymerase gamma, catalytic subunit [Aspergillus oryzae 3.042]
Length = 1135
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 301/891 (33%), Positives = 419/891 (47%), Gaps = 218/891 (24%)
Query: 3 DESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLAT 62
+E W SS+NSL +V K +C+ +DK R+ F E S E I L+ YCA D T
Sbjct: 326 EELWVGRSSVNSLRDVAKFHCD-VTIDKAQRDDFGELSREGILEKLDELLDYCAADVAIT 384
Query: 63 FEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLA 122
V + + FP FLE PHPV+
Sbjct: 385 HRVYKKV--------------------------------------FPNFLEVCPHPVSFG 406
Query: 123 GMLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLL-HDDKYKDSLW 181
+ LS+ LPVN W Y + T++ +++ L++ CD+A + D Y D W
Sbjct: 407 ALRHLSSVILPVNQTWKDYLTNAEATYHQRLDDVQRKLVELCDEALKVKDQPDVYMDDPW 466
Query: 182 LWDQDWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRRELVEKFK 241
L DWS +++K+ K K +P R + K
Sbjct: 467 LRQLDWSGQEIKMAKGKKKG--------DPP---------------------RPAARQKK 497
Query: 242 PLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIPGPS 301
P G P+WY+ +L SD +
Sbjct: 498 P----------------GMPKWYK-----------------DLFATNTSDIN-------- 516
Query: 302 LISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTDIKVPDAENIPLEQLKQLYNNI 361
++ + P LL L+W PL + +GW + +P +Q+K+ N
Sbjct: 517 -LTVRSRTAPILLKLSWDGYPLTWSDKYGWTF--------------KVPRDQVKKFENQ- 560
Query: 362 TKQDNCEANVDNAQNSLRDSVETNISFIDCSKSAKRLEVIANVLDKKKLAEASSTDTSTD 421
V+ + ++K+AE D
Sbjct: 561 -------------------------------------PVVLCDMTEEKIAELR------D 577
Query: 422 DADTPREIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEISRMLSYW 481
D R + KLPHKDG NPL++ ++ F +L+ AK +E++ SYW
Sbjct: 578 D----RRHVYFKLPHKDGPQARCVNPLAKGYMQYFERGTLSSQYALAKEALEMNASCSYW 633
Query: 482 RNNHERVKKQFVVWLNKKDLPRRLVENIESEGRDYGVILPQLIVSGTLTRRAVEATWMTA 541
+ +R+ Q VV+ K ++ + N ES G ILPQ+I GT+TRRAVE TW+TA
Sbjct: 634 ISARDRIMGQMVVY--KDEVQKSASNNAESRT---GFILPQVIPMGTITRRAVENTWLTA 688
Query: 542 SNAVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLS 601
SNA RVGSEL+AMI+AP GY +GADVDSQELWIAS+IGD+ + HG +G+MTL
Sbjct: 689 SNAKENRVGSELKAMIKAPPGYVFVGADVDSQELWIASLIGDAQF-QIHGGNAIGFMTLE 747
Query: 602 GQKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKA 661
G K+ TDMHS TAK +GISR AK+ NY RIYGAG +FA LL+QFNP MS+ + A
Sbjct: 748 GSKAAGTDMHSRTAKILGISRNDAKVFNYGRIYGAGVKFAASLLRQFNPSMSEKQTQEVA 807
Query: 662 RKMYTLTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQWYGGTESA 721
K+Y TKG + R R+ S D P W GGTES
Sbjct: 808 TKLYQETKGARTTR-----------RILS-------------------DSPFWRGGTESF 837
Query: 722 MFNRLEEIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLVC 781
+FN+LEE A +P TP L ++ AL + F+ +RINW +QS VD+LHL+++
Sbjct: 838 VFNKLEEFADQERPRTPTLGAGITEALMRRFINRGSFMTSRINWAIQSSGVDYLHLLIIA 897
Query: 782 MRWLVSR---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIPL 838
M +L+ R R I++HDEIRYLV DE+KY ALAL V N+ TRA +++ + D+P
Sbjct: 898 MDYLIRRFNIAARLAITVHDEIRYLVKDEDKYRAALALQVANVWTRAMFSQQVGINDLPQ 957
Query: 839 SISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDK 889
S ++FS V+ID VLRKE D DC TPS+P + IP GE LDI Q ++K
Sbjct: 958 SCAYFSAVDIDHVLRKEVDMDCVTPSHP------HKIPHGESLDIVQLLEK 1002
>gi|238499913|ref|XP_002381191.1| DNA polymerase gamma [Aspergillus flavus NRRL3357]
gi|220692944|gb|EED49290.1| DNA polymerase gamma [Aspergillus flavus NRRL3357]
Length = 1015
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 301/891 (33%), Positives = 419/891 (47%), Gaps = 218/891 (24%)
Query: 3 DESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLAT 62
+E W SS+NSL +V K +C+ +DK R+ F E S E I L+ YCA D T
Sbjct: 206 EELWVGRSSVNSLRDVAKFHCD-VTIDKAQRDDFGELSREGILEKLDELLDYCAADVAIT 264
Query: 63 FEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLA 122
V + + FP FLE PHPV+
Sbjct: 265 HRVYKKV--------------------------------------FPNFLEVCPHPVSFG 286
Query: 123 GMLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLL-HDDKYKDSLW 181
+ LS+ LPVN W Y + T++ +++ L++ CD+A + D Y D W
Sbjct: 287 ALRHLSSVILPVNQTWKDYLTNAEATYHQRLDDVQRKLVELCDEALKVKDQPDVYMDDPW 346
Query: 182 LWDQDWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRRELVEKFK 241
L DWS +++K+ K K +P R + K
Sbjct: 347 LRQLDWSGQEIKMAKGKKKG--------DPP---------------------RPAARQKK 377
Query: 242 PLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIPGPS 301
P G P+WY+ +L SD +
Sbjct: 378 P----------------GMPKWYK-----------------DLFATNTSDIN-------- 396
Query: 302 LISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTDIKVPDAENIPLEQLKQLYNNI 361
++ + P LL L+W PL + +GW + +P +Q+K+ N
Sbjct: 397 -LTVRSRTAPILLKLSWDGYPLTWSDKYGWTF--------------KVPRDQVKKFENQ- 440
Query: 362 TKQDNCEANVDNAQNSLRDSVETNISFIDCSKSAKRLEVIANVLDKKKLAEASSTDTSTD 421
V+ + ++K+AE D
Sbjct: 441 -------------------------------------PVVLCDMTEEKIAELR------D 457
Query: 422 DADTPREIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEISRMLSYW 481
D R + KLPHKDG NPL++ ++ F +L+ AK +E++ SYW
Sbjct: 458 D----RRHVYFKLPHKDGPQARCVNPLAKGYMQYFERGTLSSQYALAKEALEMNASCSYW 513
Query: 482 RNNHERVKKQFVVWLNKKDLPRRLVENIESEGRDYGVILPQLIVSGTLTRRAVEATWMTA 541
+ +R+ Q VV+ K ++ + N ES G ILPQ+I GT+TRRAVE TW+TA
Sbjct: 514 ISARDRIMGQMVVY--KDEVQKSASNNAESRT---GFILPQVIPMGTITRRAVENTWLTA 568
Query: 542 SNAVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLS 601
SNA RVGSEL+AMI+AP GY +GADVDSQELWIAS+IGD+ + HG +G+MTL
Sbjct: 569 SNAKENRVGSELKAMIKAPPGYVFVGADVDSQELWIASLIGDAQF-QIHGGNAIGFMTLE 627
Query: 602 GQKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKA 661
G K+ TDMHS TAK +GISR AK+ NY RIYGAG +FA LL+QFNP MS+ + A
Sbjct: 628 GSKAAGTDMHSRTAKILGISRNDAKVFNYGRIYGAGVKFAASLLRQFNPSMSEKQTQEVA 687
Query: 662 RKMYTLTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQWYGGTESA 721
K+Y TKG + R R+ S D P W GGTES
Sbjct: 688 TKLYQETKGARTTR-----------RILS-------------------DSPFWRGGTESF 717
Query: 722 MFNRLEEIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLVC 781
+FN+LEE A +P TP L ++ AL + F+ +RINW +QS VD+LHL+++
Sbjct: 718 VFNKLEEFADQERPRTPTLGAGITEALMRRFINRGSFMTSRINWAIQSSGVDYLHLLIIA 777
Query: 782 MRWLVSR---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIPL 838
M +L+ R R I++HDEIRYLV DE+KY ALAL V N+ TRA +++ + D+P
Sbjct: 778 MDYLIRRFNIAARLAITVHDEIRYLVKDEDKYRAALALQVANVWTRAMFSQQVGINDLPQ 837
Query: 839 SISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDK 889
S ++FS V+ID VLRKE D DC TPS+P + IP GE LDI Q ++K
Sbjct: 838 SCAYFSAVDIDHVLRKEVDMDCVTPSHP------HKIPHGESLDIVQLLEK 882
>gi|83772845|dbj|BAE62973.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 1017
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 301/891 (33%), Positives = 419/891 (47%), Gaps = 218/891 (24%)
Query: 3 DESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLAT 62
+E W SS+NSL +V K +C+ +DK R+ F E S E I L+ YCA D T
Sbjct: 322 EELWVGRSSVNSLRDVAKFHCD-VTIDKAQRDDFGELSREGILEKLDELLDYCAADVAIT 380
Query: 63 FEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLA 122
V + + FP FLE PHPV+
Sbjct: 381 HRVYKKV--------------------------------------FPNFLEVCPHPVSFG 402
Query: 123 GMLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLL-HDDKYKDSLW 181
+ LS+ LPVN W Y + T++ +++ L++ CD+A + D Y D W
Sbjct: 403 ALRHLSSVILPVNQTWKDYLTNAEATYHQRLDDVQRKLVELCDEALKVKDQPDVYMDDPW 462
Query: 182 LWDQDWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRRELVEKFK 241
L DWS +++K+ K K +P R + K
Sbjct: 463 LRQLDWSGQEIKMAKGKKKG--------DPP---------------------RPAARQKK 493
Query: 242 PLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIPGPS 301
P G P+WY+ +L SD +
Sbjct: 494 P----------------GMPKWYK-----------------DLFATNTSDIN-------- 512
Query: 302 LISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTDIKVPDAENIPLEQLKQLYNNI 361
++ + P LL L+W PL + +GW + +P +Q+K+ N
Sbjct: 513 -LTVRSRTAPILLKLSWDGYPLTWSDKYGWTF--------------KVPRDQVKKFENQ- 556
Query: 362 TKQDNCEANVDNAQNSLRDSVETNISFIDCSKSAKRLEVIANVLDKKKLAEASSTDTSTD 421
V+ + ++K+AE D
Sbjct: 557 -------------------------------------PVVLCDMTEEKIAELR------D 573
Query: 422 DADTPREIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEISRMLSYW 481
D R + KLPHKDG NPL++ ++ F +L+ AK +E++ SYW
Sbjct: 574 D----RRHVYFKLPHKDGPQARCVNPLAKGYMQYFERGTLSSQYALAKEALEMNASCSYW 629
Query: 482 RNNHERVKKQFVVWLNKKDLPRRLVENIESEGRDYGVILPQLIVSGTLTRRAVEATWMTA 541
+ +R+ Q VV+ K ++ + N ES G ILPQ+I GT+TRRAVE TW+TA
Sbjct: 630 ISARDRIMGQMVVY--KDEVQKSASNNAESRT---GFILPQVIPMGTITRRAVENTWLTA 684
Query: 542 SNAVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLS 601
SNA RVGSEL+AMI+AP GY +GADVDSQELWIAS+IGD+ + HG +G+MTL
Sbjct: 685 SNAKENRVGSELKAMIKAPPGYVFVGADVDSQELWIASLIGDAQF-QIHGGNAIGFMTLE 743
Query: 602 GQKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKA 661
G K+ TDMHS TAK +GISR AK+ NY RIYGAG +FA LL+QFNP MS+ + A
Sbjct: 744 GSKAAGTDMHSRTAKILGISRNDAKVFNYGRIYGAGVKFAASLLRQFNPSMSEKQTQEVA 803
Query: 662 RKMYTLTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQWYGGTESA 721
K+Y TKG + R R+ S D P W GGTES
Sbjct: 804 TKLYQETKGARTTR-----------RILS-------------------DSPFWRGGTESF 833
Query: 722 MFNRLEEIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLVC 781
+FN+LEE A +P TP L ++ AL + F+ +RINW +QS VD+LHL+++
Sbjct: 834 VFNKLEEFADQERPRTPTLGAGITEALMRRFINRGSFMTSRINWAIQSSGVDYLHLLIIA 893
Query: 782 MRWLVSR---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIPL 838
M +L+ R R I++HDEIRYLV DE+KY ALAL V N+ TRA +++ + D+P
Sbjct: 894 MDYLIRRFNIAARLAITVHDEIRYLVKDEDKYRAALALQVANVWTRAMFSQQVGINDLPQ 953
Query: 839 SISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDK 889
S ++FS V+ID VLRKE D DC TPS+P + IP GE LDI Q ++K
Sbjct: 954 SCAYFSAVDIDHVLRKEVDMDCVTPSHP------HKIPHGESLDIVQLLEK 998
>gi|254571647|ref|XP_002492933.1| DNA polymerase gamma [Komagataella pastoris GS115]
gi|238032731|emb|CAY70754.1| DNA polymerase gamma [Komagataella pastoris GS115]
gi|328353057|emb|CCA39455.1| DNA polymerase gamma 1 [Komagataella pastoris CBS 7435]
Length = 1012
Score = 444 bits (1141), Expect = e-121, Method: Compositional matrix adjust.
Identities = 293/894 (32%), Positives = 423/894 (47%), Gaps = 236/894 (26%)
Query: 1 MTDESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTL 60
+ D W N SSLNSL V + YC+ K L K RN F +++ N+ LM YCAKD
Sbjct: 284 LEDNPWINKSSLNSLERVAEFYCKIK-LKKDIRNSFATEDPDELRGNFDELMQYCAKDVF 342
Query: 61 ATFEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVT 120
AT + V Q ++P F + PHPV+
Sbjct: 343 ATGK--------------------------------------VFQKVYPKFKKLIPHPVS 364
Query: 121 LAGMLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHD--DKYKD 178
LA + ++S+ LP W Y S + + + ++ L C++ L D +++
Sbjct: 365 LAALKDISSCILPTTTKWEDYIETSERLYQESRRMIEKNLHVICEETVKLKDDPTKPWEN 424
Query: 179 SLWLWDQDWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRRELVE 238
WL DW++ ++L KK EI+KN
Sbjct: 425 DPWLSQLDWTIDPIRLTKKG-----------------EIHKN------------------ 449
Query: 239 KFKPLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIP 298
+LP GYP WY++L VK EL
Sbjct: 450 ---------QKLP-------GYPNWYKQLIVK-----------NEL-------------- 468
Query: 299 GPSLISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTDIKVPDAENIPLEQLKQLY 358
++T + +P LL L W PL++I+ GW + KVP + E+L
Sbjct: 469 ---KLTTKTRTSPLLLKLAWNGNPLYWIQTQGWCF--------KVPKNKTEEYEKL---- 513
Query: 359 NNITKQDNCEANVDNAQNSLRDSVETNISFIDCSKSAKRLEVIANVLDKKKLAEASSTDT 418
+F+ ++ KKL+E ++
Sbjct: 514 ----------------------------NFV--------------MVSLKKLSEDPGFES 531
Query: 419 STDDADTPREIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEISRML 478
A+ + F+K+PH DG V N +++ + F L AK ++++
Sbjct: 532 IR--AEDLKNFTFVKVPHPDGPSARVTNCMTKSCLGFFEKGFLNSQYPLAKDALQMAVAS 589
Query: 479 SYWRNNHERVKKQFVVWLNKKDLPRRLVENIESEGRDYGVILPQLIVSGTLTRRAVEATW 538
SYW ++ ER+ QFVV+ + D G ILPQ+I GT+TRRAVE TW
Sbjct: 590 SYWTSSRERIMNQFVVFED-----------------DMGYILPQIIPMGTITRRAVENTW 632
Query: 539 MTASNAVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWM 598
+TASNA R+GSEL+++I+AP GY +GADVDS+ELWIAS+IGDS K HG T +GWM
Sbjct: 633 LTASNAKKNRLGSELKSLIEAPKGYCFVGADVDSEELWIASLIGDS-VFKIHGGTAIGWM 691
Query: 599 TLSGQKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAK 658
TL G K+ TD+HS TAK +GISR AKI NY RIYGAG +F LLK+FNP +S ++AK
Sbjct: 692 TLEGTKNEGTDLHSKTAKILGISRNEAKIFNYGRIYGAGIKFTTTLLKKFNPALSDAEAK 751
Query: 659 SKARKMYTLTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQWYGGT 718
+ A +YT TKG + +Y+ + + WYGG+
Sbjct: 752 ATANALYTATKG-----------------ISGRYDKKSI----------------WYGGS 778
Query: 719 ESAMFNRLEEIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLM 778
ES +FNRLE IA P TP L ++ L+ + + F+ +RINW +QS VD+LHL+
Sbjct: 779 ESIIFNRLEAIAEMAHPKTPVLGAGITAPLQKANLSTNNFLTSRINWAIQSSGVDYLHLL 838
Query: 779 LVCMRWLVSR---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTD 835
++ M +L+ D R I++HDEIRYLV +E+K+ A AL ++NL TRA ++L + +
Sbjct: 839 IISMDYLIKLFDIDARLCITVHDEIRYLVKEEDKFRAAYALQISNLWTRAMFCQQLGINE 898
Query: 836 IPLSISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDK 889
+P S +FFS V++D VLRKE D DC TPSNP IP G+ LDIY+ + +
Sbjct: 899 VPQSCAFFSAVDLDFVLRKEVDLDCVTPSNP------DPIPCGKSLDIYELLQQ 946
>gi|295670549|ref|XP_002795822.1| DNA polymerase gamma [Paracoccidioides sp. 'lutzii' Pb01]
gi|226284907|gb|EEH40473.1| DNA polymerase gamma [Paracoccidioides sp. 'lutzii' Pb01]
Length = 1142
Score = 441 bits (1133), Expect = e-120, Method: Compositional matrix adjust.
Identities = 296/895 (33%), Positives = 422/895 (47%), Gaps = 221/895 (24%)
Query: 3 DESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLAT 62
+E W SS+NSL +V K +C +DK+ R+ F E + + L+ YCA D
Sbjct: 324 EELWVGRSSINSLRDVAKFHC-NITIDKSQRDYFSELDRSAVLEHLDELIDYCAAD---- 378
Query: 63 FEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLA 122
V++ T V + +FP FLE PHPV+
Sbjct: 379 ------------------VSI----------------THRVYKRVFPTFLEVCPHPVSFG 404
Query: 123 GMLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDK---YKDS 179
+ LS+ LPVNN W +Y + +T+ L +++ L++ CD+A ++ DK Y+
Sbjct: 405 ALRHLSSVILPVNNTWDEYLKNAEETYQRLLEDVRKRLLELCDRAVAV--KDKPEIYEKD 462
Query: 180 LWLWDQDWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRRELVEK 239
WL DWS +++++ K K V
Sbjct: 463 PWLRQLDWSGQEIRMVKGKKKGDPVR---------------------------------- 488
Query: 240 FKPLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIPG 299
P L G P+WY+ G+ TS + I
Sbjct: 489 -----------PAARQKLPGMPKWYK----------------------GLFPTSTSAIN- 514
Query: 300 PSLISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTDIKVPDAENIPLEQLKQLYN 359
+S ++ P LL L+W PL + +GW + +P ++LK+ N
Sbjct: 515 ---LSVRTRLAPILLKLSWLGYPLFWSDVYGWTF--------------QVPKKELKKFEN 557
Query: 360 NITKQDNCEANVDNAQNSLRDSVETNISFIDCSKSAKRLEVIANVLDKKKLAEASSTDTS 419
A N +VE N+ D DK+ +
Sbjct: 558 Q-------------AVNPCNMAVEKNLLLKD---------------DKEHV--------- 580
Query: 420 TDDADTPREIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEISRMLS 479
+ KLPHKDG NPL++ ++ F L+ AK +E++ S
Sbjct: 581 -----------YFKLPHKDGPESRCVNPLAKGYLQYFEGGRLSSQFDLAKEALEMNASCS 629
Query: 480 YWRNNHERVKKQFVVWLNKKDLPRRLVENIESEGRDYGVILPQLIVSGTLTRRAVEATWM 539
YW + +R+ Q VV+ N D+ + ++ G ILPQ+I GT+TRRAVE TW+
Sbjct: 630 YWISARDRITSQMVVYQN--DIEKLTERSLSDPSLKQGFILPQVIPMGTITRRAVENTWL 687
Query: 540 TASNAVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMT 599
TASNA RVGSEL+AM++AP GY +GADVDS+ELWIAS++GD+ + HG +G+MT
Sbjct: 688 TASNAKANRVGSELKAMVRAPPGYVFVGADVDSEELWIASLVGDAQF-QIHGGNAIGFMT 746
Query: 600 LSGQKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKS 659
L G K+ TD+HS TAK +GISR AK+ NY RIYGAG +FA LL+QFNP M + K
Sbjct: 747 LEGTKAAGTDLHSKTAKILGISRNDAKVFNYGRIYGAGLKFAATLLRQFNPSMPEQQTKQ 806
Query: 660 KARKMYTLTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIF-DKPQWYGGT 718
A K+Y TKG + R KIF ++P W GGT
Sbjct: 807 VAAKLYEETKGTRTNR-------------------------------KIFSNRPFWRGGT 835
Query: 719 ESAMFNRLEEIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLM 778
ES +FN+LEE A +P TP L ++ AL + F+ +RINW +QS VD+LHL+
Sbjct: 836 ESFVFNKLEEFAEQERPRTPVLGAGITEALMRRFINKGSFMTSRINWAIQSSGVDYLHLL 895
Query: 779 LVCMRWLVSR---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTD 835
++ M +L+ R D R I++HDEIRYLV D +KY TA+AL V NL TRA +++ + D
Sbjct: 896 IISMDFLIRRFNLDARLAITVHDEIRYLVRDHDKYRTAMALQVANLWTRAMFSQEMGIDD 955
Query: 836 IPLSISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKA 890
+P S ++FS V+IDKVLRKE D DC TPS+P IP GE L+I + K
Sbjct: 956 LPQSCAYFSAVDIDKVLRKEVDMDCITPSHP------NKIPHGESLNIESLLAKG 1004
>gi|119174697|ref|XP_001239691.1| hypothetical protein CIMG_09312 [Coccidioides immitis RS]
gi|392869882|gb|EAS28416.2| DNA polymerase gamma [Coccidioides immitis RS]
Length = 1142
Score = 440 bits (1132), Expect = e-120, Method: Compositional matrix adjust.
Identities = 292/894 (32%), Positives = 421/894 (47%), Gaps = 216/894 (24%)
Query: 3 DESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLAT 62
+E W SS+NSL +V K +C +DK R+ F E + I+ L+ YCA D
Sbjct: 326 EELWVGRSSINSLRDVAKFHC-NVTIDKAQRDHFGELDRDGIQQRLDELLDYCAAD---- 380
Query: 63 FEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLA 122
V++ T V + +FP FLE PHPV+
Sbjct: 381 ------------------VSI----------------THRVYRKVFPNFLETCPHPVSFG 406
Query: 123 GMLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDK-YKDSLW 181
+ LST LPVN W +Y + +T++ ++++ L + C +A + + Y + W
Sbjct: 407 ALRHLSTVILPVNETWAQYIKSAEETYHRRLSDVQNRLEELCQEAVEVRDKPEVYNNDPW 466
Query: 182 LWDQDWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRRELVEKFK 241
L DWS +++K+ K K +P R + K
Sbjct: 467 LRQLDWSGQEIKMVKGKKKG--------DPP---------------------RPAARQKK 497
Query: 242 PLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIPGPS 301
P G P+WY+ L K + GP
Sbjct: 498 P----------------GMPKWYKDLFPKSN--------------------------GPM 515
Query: 302 LISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTDIKVPDAENIPLEQLKQLYNNI 361
++ +I P LL L W PL + +GW + VP
Sbjct: 516 NLTVRTRIAPILLKLAWDGYPLVWSDKYGWTFQVP------------------------- 550
Query: 362 TKQDNCEANVDNAQNSLRDSVETNISFIDCSKSAKRLEVIANVLDKKKLAEASSTDTSTD 421
+A+V Q+ + + C S ++ EV+ D
Sbjct: 551 ------KADVHKYQHQ---------AVVQCDMSEEKNEVL-----------------KID 578
Query: 422 DADTPREIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEISRMLSYW 481
A+ + KLPHKDG +P+++ ++ F L+ AK +E++ SYW
Sbjct: 579 TANV-----YYKLPHKDGPEARCVSPMAKGYLQYFEGGKLSSQFALAKEALEMNASCSYW 633
Query: 482 RNNHERVKKQFVVWLNKKDLPRRLVEN-IESEGRDYGVILPQLIVSGTLTRRAVEATWMT 540
+ +R+ Q VV+ +KDLP + ++ + G ILPQ+I GT+TRRAVE TW+T
Sbjct: 634 ISARDRIMTQLVVY--EKDLPGSSRDGKSQNPASNLGFILPQIIPMGTITRRAVENTWLT 691
Query: 541 ASNAVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTL 600
ASNA RVGSEL+AM++AP GY +GADVDS+ELWIAS++GDS + HG +G+MTL
Sbjct: 692 ASNAKANRVGSELKAMVKAPPGYVFVGADVDSEELWIASLVGDSQF-QIHGGNAIGFMTL 750
Query: 601 SGQKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSK 660
G K+ TD+HS TAK +GISR +AK+ NY RIYGAG +FA LL+QFNP +S K
Sbjct: 751 EGTKAAGTDLHSKTAKILGISRNNAKVFNYGRIYGAGLKFAATLLRQFNPSISDDQTKVI 810
Query: 661 ARKMYTLTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQWYGGTES 720
A +Y TKG + R I D P W GGTES
Sbjct: 811 AANLYKETKGTRTIR------------------------------KTISDSPFWRGGTES 840
Query: 721 AMFNRLEEIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLV 780
+FN+LEE A +P TP L ++ AL + F+ +RINW +QS VD+LHL+++
Sbjct: 841 FVFNKLEEFAEQERPRTPVLGAGITEALMRRFINKGSFMTSRINWAIQSSGVDYLHLLII 900
Query: 781 CMRWLVSR---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIP 837
M +LV R + R IS+HDEIRYLV +E+KY A+AL V N+ TRA +++ + D+P
Sbjct: 901 SMDFLVRRFNLNARLAISVHDEIRYLVKEEDKYRAAMALQVANIWTRAMFSQQMGIDDLP 960
Query: 838 LSISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKAN 891
S ++FS V+ID VLRKE D DC TPS+P IP GE +DI Q ++K +
Sbjct: 961 QSCAYFSAVDIDHVLRKEVDMDCVTPSHP------QKIPPGECIDIAQLLEKGD 1008
>gi|320037536|gb|EFW19473.1| DNA polymerase gamma [Coccidioides posadasii str. Silveira]
Length = 1142
Score = 440 bits (1131), Expect = e-120, Method: Compositional matrix adjust.
Identities = 292/894 (32%), Positives = 421/894 (47%), Gaps = 216/894 (24%)
Query: 3 DESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLAT 62
+E W SS+NSL +V K +C +DK R+ F E + I+ L+ YCA D
Sbjct: 326 EELWVGRSSINSLRDVAKFHC-NVTIDKAQRDHFGELDRDGIQQRLDELLDYCAAD---- 380
Query: 63 FEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLA 122
V++ T V + +FP FLE PHPV+
Sbjct: 381 ------------------VSI----------------THRVYRKVFPNFLETCPHPVSFG 406
Query: 123 GMLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDK-YKDSLW 181
+ LST LPVN W +Y + +T++ ++++ L + C +A + + Y + W
Sbjct: 407 ALRHLSTVILPVNETWAQYIKRAEETYHRRLSDVQNRLEELCQEAVEVRDKPEVYNNDPW 466
Query: 182 LWDQDWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRRELVEKFK 241
L DWS +++K+ K K +P R + K
Sbjct: 467 LRQLDWSGQEIKMVKGKKKG--------DPP---------------------RPAARQKK 497
Query: 242 PLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIPGPS 301
P G P+WY+ L K + GP
Sbjct: 498 P----------------GMPKWYKDLFPKSN--------------------------GPM 515
Query: 302 LISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTDIKVPDAENIPLEQLKQLYNNI 361
++ +I P LL L W PL + +GW + VP
Sbjct: 516 NLTVRTRIAPILLKLAWDGYPLVWSDKYGWTFQVP------------------------- 550
Query: 362 TKQDNCEANVDNAQNSLRDSVETNISFIDCSKSAKRLEVIANVLDKKKLAEASSTDTSTD 421
+A+V Q+ + + C S ++ EV+ D
Sbjct: 551 ------KADVHKYQHQ---------AVVQCDMSEEKNEVL-----------------KID 578
Query: 422 DADTPREIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEISRMLSYW 481
A+ + KLPHKDG +P+++ ++ F L+ AK +E++ SYW
Sbjct: 579 TANV-----YYKLPHKDGPEARCVSPMAKGYLQYFEGGKLSSQFALAKEALEMNASCSYW 633
Query: 482 RNNHERVKKQFVVWLNKKDLPRRLVEN-IESEGRDYGVILPQLIVSGTLTRRAVEATWMT 540
+ +R+ Q VV+ +KDLP + ++ + G ILPQ+I GT+TRRAVE TW+T
Sbjct: 634 ISARDRIMTQLVVY--EKDLPGSSRDGKSQNPASNLGFILPQIIPMGTITRRAVENTWLT 691
Query: 541 ASNAVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTL 600
ASNA RVGSEL+AM++AP GY +GADVDS+ELWIAS++GDS + HG +G+MTL
Sbjct: 692 ASNAKANRVGSELKAMVKAPPGYVFVGADVDSEELWIASLVGDSQF-QIHGGNAIGFMTL 750
Query: 601 SGQKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSK 660
G K+ TD+HS TAK +GISR +AK+ NY RIYGAG +FA LL+QFNP +S K
Sbjct: 751 EGTKAAGTDLHSKTAKILGISRNNAKVFNYGRIYGAGLKFAATLLRQFNPSISDDQTKVI 810
Query: 661 ARKMYTLTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQWYGGTES 720
A +Y TKG + R I D P W GGTES
Sbjct: 811 AANLYKETKGTRTIR------------------------------KTISDSPFWRGGTES 840
Query: 721 AMFNRLEEIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLV 780
+FN+LEE A +P TP L ++ AL + F+ +RINW +QS VD+LHL+++
Sbjct: 841 FVFNKLEEFAEQERPRTPVLGAGITEALMRRFINKGSFMTSRINWAIQSSGVDYLHLLII 900
Query: 781 CMRWLVSR---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIP 837
M +LV R + R IS+HDEIRYLV +E+KY A+AL V N+ TRA +++ + D+P
Sbjct: 901 SMDFLVRRFNLNARLAISVHDEIRYLVKEEDKYRAAMALQVANIWTRAMFSQQMGIDDLP 960
Query: 838 LSISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKAN 891
S ++FS V+ID VLRKE D DC TPS+P IP GE +DI Q ++K +
Sbjct: 961 QSCAYFSAVDIDHVLRKEVDMDCVTPSHP------QKIPPGECIDIAQLLEKGD 1008
>gi|303314467|ref|XP_003067242.1| DNA polymerase gamma, putative [Coccidioides posadasii C735 delta
SOWgp]
gi|240106910|gb|EER25097.1| DNA polymerase gamma, putative [Coccidioides posadasii C735 delta
SOWgp]
Length = 1142
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 292/894 (32%), Positives = 421/894 (47%), Gaps = 216/894 (24%)
Query: 3 DESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLAT 62
+E W SS+NSL +V K +C +DK R+ F E + I+ L+ YCA D
Sbjct: 326 EELWVGRSSINSLRDVAKFHC-NVTIDKAQRDHFGELDRDGIQQRLDELLDYCAAD---- 380
Query: 63 FEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLA 122
V++ T V + +FP FLE PHPV+
Sbjct: 381 ------------------VSI----------------THRVYRKVFPNFLETCPHPVSFG 406
Query: 123 GMLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDK-YKDSLW 181
+ LST LPVN W +Y + +T++ ++++ L + C +A + + Y + W
Sbjct: 407 ALRHLSTVILPVNETWAQYIKRAEETYHRRLSDVQNRLEELCQEAVEVRDKPEVYNNDPW 466
Query: 182 LWDQDWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRRELVEKFK 241
L DWS +++K+ K K +P R + K
Sbjct: 467 LRQLDWSGQEIKMVKGKKKG--------DPP---------------------RPAARQKK 497
Query: 242 PLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIPGPS 301
P G P+WY+ L K + GP
Sbjct: 498 P----------------GMPKWYKDLFPKSN--------------------------GPM 515
Query: 302 LISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTDIKVPDAENIPLEQLKQLYNNI 361
++ +I P LL L W PL + +GW + VP
Sbjct: 516 NLTVRTRIAPILLKLAWDGYPLVWSDKYGWTFQVP------------------------- 550
Query: 362 TKQDNCEANVDNAQNSLRDSVETNISFIDCSKSAKRLEVIANVLDKKKLAEASSTDTSTD 421
+A+V Q+ + + C S ++ EV+ D
Sbjct: 551 ------KADVHKYQHQ---------AVVQCDMSEEKNEVL-----------------KID 578
Query: 422 DADTPREIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEISRMLSYW 481
A+ + KLPHKDG +P+++ ++ F L+ AK +E++ SYW
Sbjct: 579 TANV-----YYKLPHKDGPEARCVSPMAKGYLQYFEGGKLSSQFALAKEALEMNASCSYW 633
Query: 482 RNNHERVKKQFVVWLNKKDLPRRLVEN-IESEGRDYGVILPQLIVSGTLTRRAVEATWMT 540
+ +R+ Q VV+ +KDLP + ++ + G ILPQ+I GT+TRRAVE TW+T
Sbjct: 634 ISARDRIMTQLVVY--EKDLPGSSRDGKSQNPASNLGFILPQIIPMGTITRRAVENTWLT 691
Query: 541 ASNAVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTL 600
ASNA RVGSEL+AM++AP GY +GADVDS+ELWIAS++GDS + HG +G+MTL
Sbjct: 692 ASNAKANRVGSELKAMVKAPPGYVFVGADVDSEELWIASLVGDSQF-QIHGGNAIGFMTL 750
Query: 601 SGQKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSK 660
G K+ TD+HS TAK +GISR +AK+ NY RIYGAG +FA LL+QFNP +S K
Sbjct: 751 EGTKAAGTDLHSKTAKILGISRNNAKVFNYGRIYGAGLKFAATLLRQFNPSISDDQTKVI 810
Query: 661 ARKMYTLTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQWYGGTES 720
A +Y TKG + R I D P W GGTES
Sbjct: 811 AANLYKETKGTRTIR------------------------------KTISDSPFWRGGTES 840
Query: 721 AMFNRLEEIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLV 780
+FN+LEE A +P TP L ++ AL + F+ +RINW +QS VD+LHL+++
Sbjct: 841 FVFNKLEEFAEQERPRTPVLGAGITEALMRRFINKGSFMTSRINWAIQSSGVDYLHLLII 900
Query: 781 CMRWLVSR---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIP 837
M +LV R + R IS+HDEIRYLV +E+KY A+AL V N+ TRA +++ + D+P
Sbjct: 901 SMDFLVRRFNLNARLAISVHDEIRYLVKEEDKYRAAMALQVANIWTRAMFSQQMGIDDLP 960
Query: 838 LSISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKAN 891
S ++FS V+ID VLRKE D DC TPS+P IP GE +DI Q ++K +
Sbjct: 961 QSCAYFSAVDIDHVLRKEVDMDCVTPSHP------QKIPPGECIDIAQLLEKGD 1008
>gi|261189615|ref|XP_002621218.1| DNA polymerase gamma [Ajellomyces dermatitidis SLH14081]
gi|239591454|gb|EEQ74035.1| DNA polymerase gamma [Ajellomyces dermatitidis SLH14081]
Length = 1126
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 297/893 (33%), Positives = 421/893 (47%), Gaps = 223/893 (24%)
Query: 6 WTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLATFEV 65
W SS+NSL +V K +C +DK R+ F E I L+ YCA D
Sbjct: 309 WVGRSSVNSLRDVAKFHC-NVTIDKAQRDHFGELDRPGILERLDELLDYCAAD------- 360
Query: 66 IQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLAGML 125
V++ T V + +FP FLE PHPV+ +
Sbjct: 361 ---------------VSI----------------THRVYKQVFPNFLEVCPHPVSFGALR 389
Query: 126 ELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDK---YKDSLWL 182
LS+ LPVNN W +Y + +T+ L +++ L+ CD A ++ DK Y++ WL
Sbjct: 390 HLSSVILPVNNTWEEYLKNAEETYQRLLEDVQRRLLKLCDSALAV--KDKPEIYENDPWL 447
Query: 183 WDQDWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRRELVEKFKP 242
DWS +++++ K K G+ P
Sbjct: 448 RQLDWSGQEIRMVKG--------------------KKKGD------------------PP 469
Query: 243 LMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIPGPSL 302
+ ++P G P+WY+ G+ TS + P
Sbjct: 470 RPAARQKMP-------GMPKWYK----------------------GLFATSTS----PIN 496
Query: 303 ISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTDIKVPDAENIPLEQLKQLYNNIT 362
+S ++ P LL L+W PL + HGW + +P ++K+ N
Sbjct: 497 LSVRTRLAPILLKLSWLGYPLVWSDVHGWTF--------------QVPKREIKKFEN--- 539
Query: 363 KQDNCEANVDNAQN-SLRDSVETNISFIDCSKSAKRLEVIANVLDKKKLAEASSTDTSTD 421
Q N+ +N SLRD
Sbjct: 540 -QALAPCNMAEEKNLSLRDD---------------------------------------- 558
Query: 422 DADTPREIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEISRMLSYW 481
RE + KLPHKDG +PL++ ++ F L+ AK +E++ SYW
Sbjct: 559 -----REHIYFKLPHKDGPEARCTSPLAKGYLQYFEGGKLSSQFALAKEALEMNASCSYW 613
Query: 482 RNNHERVKKQFVVWLNKKDLPRRLVENIESEGRDYGVILPQLIVSGTLTRRAVEATWMTA 541
+ +R++ Q VV+ N D+ R ++I + G ILPQ+I GT+TRRAVE TW+TA
Sbjct: 614 ISARDRIRSQLVVYHN--DVERLKNKSISNPSFKQGYILPQIIPMGTITRRAVENTWLTA 671
Query: 542 SNAVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLS 601
SNA RVGSEL+AM+ AP GY +GADVDS+ELWIAS++GD+ + HG +G+MTL
Sbjct: 672 SNAKANRVGSELKAMVTAPPGYVFVGADVDSEELWIASLVGDAQF-QIHGGNAIGFMTLE 730
Query: 602 GQKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKA 661
G K+ TD+HS TAK +GISR AK+ NY RIYGAG +FA LL+QFNP MS+ + K A
Sbjct: 731 GTKAAGTDLHSKTAKILGISRNDAKVFNYGRIYGAGLKFAATLLRQFNPSMSEHETKQVA 790
Query: 662 RKMYTLTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIF-DKPQWYGGTES 720
K+Y TKG + R KI D P W GGTES
Sbjct: 791 AKLYKETKGVRTNR-------------------------------KILSDNPFWRGGTES 819
Query: 721 AMFNRLEEIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLV 780
+FN+LEE A +P TP L ++ AL + F+ +RINW +QS VD+LHL+++
Sbjct: 820 FVFNKLEEFAEQERPRTPVLGAGITEALMRRFINKGSFMTSRINWAIQSSGVDYLHLLII 879
Query: 781 CMRWLVSR---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIP 837
M +L+ R D R I++HDEIRYLV + +KY A+AL + NL TRA +++ + D+P
Sbjct: 880 SMDFLIRRFNLDARLAITVHDEIRYLVKEHDKYRAAMALQIANLWTRAMFSQEMGIDDLP 939
Query: 838 LSISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKA 890
S ++FS V+IDKVLRKE D DC TPS+P IP GE LDI ++K
Sbjct: 940 QSCAYFSAVDIDKVLRKEVDMDCITPSHP------NKIPHGESLDIENLLNKG 986
>gi|239613015|gb|EEQ90002.1| DNA polymerase gamma [Ajellomyces dermatitidis ER-3]
gi|327356950|gb|EGE85807.1| DNA polymerase gamma [Ajellomyces dermatitidis ATCC 18188]
Length = 1146
Score = 439 bits (1129), Expect = e-120, Method: Compositional matrix adjust.
Identities = 297/893 (33%), Positives = 421/893 (47%), Gaps = 223/893 (24%)
Query: 6 WTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLATFEV 65
W SS+NSL +V K +C +DK R+ F E I L+ YCA D
Sbjct: 329 WVGRSSVNSLRDVAKFHC-NVTIDKAQRDHFGELDRPGILERLDELLDYCAAD------- 380
Query: 66 IQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLAGML 125
V++ T V + +FP FLE PHPV+ +
Sbjct: 381 ---------------VSI----------------THRVYKQVFPNFLEVCPHPVSFGALR 409
Query: 126 ELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDK---YKDSLWL 182
LS+ LPVNN W +Y + +T+ L +++ L+ CD A ++ DK Y++ WL
Sbjct: 410 HLSSVILPVNNTWEEYLKNAEETYQRLLEDVQRRLLKLCDSALAV--KDKPEIYENDPWL 467
Query: 183 WDQDWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRRELVEKFKP 242
DWS +++++ K K G+ P
Sbjct: 468 RQLDWSGQEIRMVKG--------------------KKKGD------------------PP 489
Query: 243 LMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIPGPSL 302
+ ++P G P+WY+ G+ TS + P
Sbjct: 490 RPAARQKMP-------GMPKWYK----------------------GLFATSTS----PIN 516
Query: 303 ISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTDIKVPDAENIPLEQLKQLYNNIT 362
+S ++ P LL L+W PL + HGW + +P ++K+ N
Sbjct: 517 LSVRTRLAPILLKLSWLGYPLVWSDVHGWTF--------------QVPKREIKKFEN--- 559
Query: 363 KQDNCEANVDNAQN-SLRDSVETNISFIDCSKSAKRLEVIANVLDKKKLAEASSTDTSTD 421
Q N+ +N SLRD
Sbjct: 560 -QALAPCNMAEEKNLSLRDD---------------------------------------- 578
Query: 422 DADTPREIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEISRMLSYW 481
RE + KLPHKDG +PL++ ++ F L+ AK +E++ SYW
Sbjct: 579 -----REHIYFKLPHKDGPEARCTSPLAKGYLQYFEGGKLSSQFALAKEALEMNASCSYW 633
Query: 482 RNNHERVKKQFVVWLNKKDLPRRLVENIESEGRDYGVILPQLIVSGTLTRRAVEATWMTA 541
+ +R++ Q VV+ N D+ R ++I + G ILPQ+I GT+TRRAVE TW+TA
Sbjct: 634 ISARDRIRSQLVVYHN--DVERLKNKSISNPSFKQGYILPQIIPMGTITRRAVENTWLTA 691
Query: 542 SNAVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLS 601
SNA RVGSEL+AM+ AP GY +GADVDS+ELWIAS++GD+ + HG +G+MTL
Sbjct: 692 SNAKANRVGSELKAMVTAPPGYVFVGADVDSEELWIASLVGDAQF-QIHGGNAIGFMTLE 750
Query: 602 GQKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKA 661
G K+ TD+HS TAK +GISR AK+ NY RIYGAG +FA LL+QFNP MS+ + K A
Sbjct: 751 GTKAAGTDLHSKTAKILGISRNDAKVFNYGRIYGAGLKFAATLLRQFNPSMSEHETKQVA 810
Query: 662 RKMYTLTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIF-DKPQWYGGTES 720
K+Y TKG + R KI D P W GGTES
Sbjct: 811 AKLYKETKGVRTNR-------------------------------KILSDNPFWRGGTES 839
Query: 721 AMFNRLEEIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLV 780
+FN+LEE A +P TP L ++ AL + F+ +RINW +QS VD+LHL+++
Sbjct: 840 FVFNKLEEFAEQERPRTPVLGAGITEALMRRFINKGSFMTSRINWAIQSSGVDYLHLLII 899
Query: 781 CMRWLVSR---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIP 837
M +L+ R D R I++HDEIRYLV + +KY A+AL + NL TRA +++ + D+P
Sbjct: 900 SMDFLIRRFNLDARLAITVHDEIRYLVKEHDKYRAAMALQIANLWTRAMFSQEMGIDDLP 959
Query: 838 LSISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKA 890
S ++FS V+IDKVLRKE D DC TPS+P IP GE LDI ++K
Sbjct: 960 QSCAYFSAVDIDKVLRKEVDMDCITPSHP------NKIPHGESLDIENLLNKG 1006
>gi|315042021|ref|XP_003170387.1| DNA polymerase gamma [Arthroderma gypseum CBS 118893]
gi|311345421|gb|EFR04624.1| DNA polymerase gamma [Arthroderma gypseum CBS 118893]
Length = 1138
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 300/901 (33%), Positives = 426/901 (47%), Gaps = 230/901 (25%)
Query: 3 DESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLAT 62
+E W SS+NSL +V K +C +DK RN F E E I L+ YCA D T
Sbjct: 326 EELWVGRSSVNSLRDVAKFHC-NITIDKAQRNYFGELDREGINGQLDELLDYCAADVAIT 384
Query: 63 FEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLA 122
V + + FP FLE PHPV+ A
Sbjct: 385 HRVYKKV--------------------------------------FPNFLETCPHPVSFA 406
Query: 123 GMLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDK---YKDS 179
+ LST LPVN W +Y + +T++ ++ L++ C+ A + DK Y++
Sbjct: 407 ALRHLSTVILPVNETWGEYLKSAEETYHRALNNVQKRLVELCENALKV--KDKPEIYQND 464
Query: 180 LWLWDQDWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRRELVEK 239
WL DWS +++++ K K G+
Sbjct: 465 PWLRQLDWSGQEIRMVKG--------------------KKKGD----------------- 487
Query: 240 FKPLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIPG 299
P + +LP G P+WY+ L TS+A I
Sbjct: 488 -PPRPAARQKLP-------GMPKWYKDLF----------------------PTSKADIN- 516
Query: 300 PSLISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTDIKVPDAENIPLEQLKQLYN 359
I+ +I+P LL+L+W PL + HGW + +P ++L++ N
Sbjct: 517 ---ITVRTRISPILLNLSWDGFPLVWSDKHGWTF--------------EVPKKELERYEN 559
Query: 360 NITKQDNCEANVDNAQNSLRDSVETNISFIDCSKSAKRLEVIANVLDKKKLAEASSTDTS 419
C + A LR+ N S +
Sbjct: 560 RRLPHATCRGETNAA---LRE----NKSHV------------------------------ 582
Query: 420 TDDADTPREIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEISRMLS 479
+ KLPHKDG +PLS+ ++ F L AK +E++ S
Sbjct: 583 -----------YFKLPHKDGPDARCASPLSKGYLQYFESGKLTSQFPLAKEALEMNASCS 631
Query: 480 YWRNNHERVKKQFVVWLNKKDLPRRLVENIESEGRDY------GVILPQLIVSGTLTRRA 533
YW + +R+ Q VV+ KKDL EN S G++ G ILPQ+I GT+TRRA
Sbjct: 632 YWISARDRITSQMVVY--KKDL-----ENSGSPGKEVSPDSKVGFILPQVIPMGTITRRA 684
Query: 534 VEATWMTASNAVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGAT 593
VE TW+TASNA RVGSEL+AM++AP GY +GADVDS+ELWIAS++GD+ + HG
Sbjct: 685 VENTWLTASNAKPNRVGSELKAMVRAPPGYVFVGADVDSEELWIASLVGDAQF-QLHGGN 743
Query: 594 PLGWMTLSGQKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMS 653
+G+MTL G K+ TD+HS TAK +GISR +AK+ NY RIYGAG +FA LL+QFNP MS
Sbjct: 744 AIGFMTLEGTKAAGTDLHSKTAKILGISRNNAKVFNYGRIYGAGLKFAATLLRQFNPSMS 803
Query: 654 KSDAKSKARKMYTLTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQ 713
+++ K+ A K+Y TKG + R R+ S + P
Sbjct: 804 EAETKAVAAKLYKETKGTRTTR-----------RLLS-------------------EDPF 833
Query: 714 WYGGTESAMFNRLEEIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVD 773
GGTES +FN+LEE A +P TP L ++ AL + F+ +RINW +QS VD
Sbjct: 834 LRGGTESFVFNKLEEFAEQERPRTPVLGAGITEALMRRFINKGGFMTSRINWAIQSSGVD 893
Query: 774 FLHLMLVCMRWLVSR---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKK 830
+LHL+++ M +L+ R D R I++HDEIRY+V + +KY+ A+AL V NL TRA ++
Sbjct: 894 YLHLLIISMDYLIRRFNLDARLAITVHDEIRYVVRETDKYKAAMALQVANLWTRAMFSQQ 953
Query: 831 LDMTDIPLSISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKA 890
+ + D+P S +FFS V+ID VLRKE + DC TPS+P IP GE LDI + + K
Sbjct: 954 MGIDDLPQSCAFFSAVDIDHVLRKEVNMDCVTPSHP------NKIPHGESLDISELLSKG 1007
Query: 891 N 891
+
Sbjct: 1008 D 1008
>gi|70997278|ref|XP_753389.1| DNA polymerase gamma [Aspergillus fumigatus Af293]
gi|66851025|gb|EAL91351.1| DNA polymerase gamma [Aspergillus fumigatus Af293]
gi|159126884|gb|EDP52000.1| DNA polymerase gamma [Aspergillus fumigatus A1163]
Length = 1135
Score = 437 bits (1125), Expect = e-119, Method: Compositional matrix adjust.
Identities = 292/891 (32%), Positives = 421/891 (47%), Gaps = 217/891 (24%)
Query: 3 DESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLAT 62
+E W SS+NSL +V K +C+ +DK+ R+ F E + E I L+ YCA D T
Sbjct: 327 EELWVGRSSVNSLRDVAKFHCD-VTIDKSQRDHFGELNREQILGKLEELLDYCAADVAIT 385
Query: 63 FEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLA 122
V + + FP FLE PHPV+
Sbjct: 386 HRVYKKV--------------------------------------FPNFLEVCPHPVSFG 407
Query: 123 GMLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHD-DKYKDSLW 181
+ LS+ LPVN W +Y + T++ +++ L++ C++A + + D Y + W
Sbjct: 408 ALRHLSSVILPVNETWKEYITNAEATYHQRVDDVQRRLVELCNEALKVKENPDIYMNDPW 467
Query: 182 LWDQDWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRRELVEKFK 241
L DWS +++KL K K G+ R + K
Sbjct: 468 LRQLDWSGQEIKLVKG--------------------KKKGDPP---------RPAARQKK 498
Query: 242 PLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIPGPS 301
P G P+WY+ +L +D +
Sbjct: 499 P----------------GMPQWYK-----------------DLFPSATADIN-------- 517
Query: 302 LISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTDIKVPDAENIPLEQLKQLYNNI 361
++ +I P LL L+W PL + GW + +P +Q+K+ N
Sbjct: 518 -LTVRTRIAPILLKLSWDGYPLTWSDKFGWTF--------------KVPKDQVKKFENQ- 561
Query: 362 TKQDNCEANVDNAQNSLRDSVETNISFIDCSKSAKRLEVIANVLDKKKLAEASSTDTSTD 421
+ C S ++ + N D+K +
Sbjct: 562 -------------------------PVVLCDMSEEKNLELRN--DRKHV----------- 583
Query: 422 DADTPREIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEISRMLSYW 481
+ KLPHKDG NPL++ ++ F +L+ AK +E++ SYW
Sbjct: 584 ---------YFKLPHKDGPQARCVNPLAKGYLQFFERGTLSSQYALAKEALEMNASCSYW 634
Query: 482 RNNHERVKKQFVVWLNKKDLPRRLVENIESEGRDYGVILPQLIVSGTLTRRAVEATWMTA 541
+ +R+ Q VV+ +D ++ E R G ILPQ+I GT+TRRAVE TW+TA
Sbjct: 635 ISARDRIMSQMVVY---EDQVKQSGSTGEKSNR-LGFILPQIIPMGTITRRAVENTWLTA 690
Query: 542 SNAVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLS 601
SNA RVGSEL+AMI+AP GY +GADVDSQELWIAS++GD+ + HG +G+MTL
Sbjct: 691 SNAKANRVGSELKAMIKAPPGYVFVGADVDSQELWIASLVGDAQF-QLHGGNAIGFMTLE 749
Query: 602 GQKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKA 661
G K+ TDMHS TA+ +GISR AK+ NY RIYGAG +FA LL+QFNP MS+ + + A
Sbjct: 750 GSKAAGTDMHSRTAQILGISRNDAKVFNYGRIYGAGVKFAATLLRQFNPSMSEKETQEVA 809
Query: 662 RKMYTLTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQWYGGTESA 721
+Y TKG + R R+ S + P W GGTES
Sbjct: 810 TNLYRETKGTRTTR-----------RILS-------------------ENPFWRGGTESF 839
Query: 722 MFNRLEEIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLVC 781
+FN+LEE A +P TP L ++ AL + F+ +RINW +QS VD+LHL+++
Sbjct: 840 VFNKLEEFADQERPRTPVLGAGITEALMRRFINKGSFMTSRINWAIQSSGVDYLHLLIIS 899
Query: 782 MRWLVSR---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIPL 838
M +L+ R D R I++HDEIRYLV +E+KY A+AL V N+ TRA +++ + D+P
Sbjct: 900 MDYLIRRFNIDARLAITVHDEIRYLVKEEDKYRAAMALQVANVWTRAMFSQQVGIDDLPQ 959
Query: 839 SISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDK 889
S ++FS V+ID VLRKE D DC TPS+P + IP GE LDI Q +DK
Sbjct: 960 SCAYFSAVDIDHVLRKEVDMDCVTPSHP------HKIPHGESLDISQLLDK 1004
>gi|212533271|ref|XP_002146792.1| DNA polymerase gamma [Talaromyces marneffei ATCC 18224]
gi|210072156|gb|EEA26245.1| DNA polymerase gamma [Talaromyces marneffei ATCC 18224]
Length = 1122
Score = 437 bits (1124), Expect = e-119, Method: Compositional matrix adjust.
Identities = 297/895 (33%), Positives = 421/895 (47%), Gaps = 226/895 (25%)
Query: 3 DESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLAT 62
+E W SS+NSL +V K +C+ +DK+ R+ F E + I N L+ YCA D T
Sbjct: 323 EELWVGRSSVNSLRDVAKFHCD-VTIDKSKRDYFGELDKDGILNRLDELLDYCAADVAIT 381
Query: 63 FEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLA 122
V + + FP FLE PHPV+
Sbjct: 382 HRVYKKV--------------------------------------FPNFLEVCPHPVSFG 403
Query: 123 GMLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDD-KYKDSLW 181
+ LS+ LPVN W +Y + T++ +++ L++ C++A + D +Y+ W
Sbjct: 404 ALRHLSSVILPVNETWEQYLQNAENTYHKRLDDVQKRLLELCEEALKIKADPAQYESDAW 463
Query: 182 LWDQDWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRRELVEKFK 241
L DWS +++K+ K K +P R + K
Sbjct: 464 LRQLDWSGQEIKMVKGKKKG--------DPP---------------------RPAARQKK 494
Query: 242 PLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIPGPS 301
P G P+WY+ L TS A I
Sbjct: 495 P----------------GMPKWYKDLF----------------------PTSNADIN--- 513
Query: 302 LISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTDIKVPDAENIPLEQLKQLYNNI 361
++ +I P LL L+W PL + GW + VP I + +N P+ +
Sbjct: 514 -LTVRTRIAPILLKLSWDGHPLIWSDKFGWTFKVPEKEAI---NYQNQPVTR-------- 561
Query: 362 TKQDNCEANVDNAQNSLRDSVETNISFIDCSKSAKRLEVIANVLDKKKLAEASSTDTSTD 421
C+ N ETN+ D +K
Sbjct: 562 -----CDMNE-----------ETNLELRDDTKHV-------------------------- 579
Query: 422 DADTPREIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEISRMLSYW 481
+ KLPHKDG NPL++ ++ F +L+ AK +E++ SYW
Sbjct: 580 ---------YYKLPHKDGPQARCINPLAKGYLTYFERGTLSSKFALAKEALEMNASCSYW 630
Query: 482 RNNHERVKKQFVVWLNKKDLPRRLVENIESEGR-DYGVILPQLIVSGTLTRRAVEATWMT 540
+ +R+ Q VV+ + DL N + E + G ILPQ+I GT+TRRAVE TW+T
Sbjct: 631 ISARDRIMSQLVVY--EDDL------NGQKEAKKQLGFILPQIIPMGTITRRAVENTWLT 682
Query: 541 ASNAVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTL 600
ASNA G RVGSEL+AMI+AP GY +GADVDSQELWIAS++GD+ + HG +G+MTL
Sbjct: 683 ASNAKGNRVGSELKAMIKAPPGYVFVGADVDSQELWIASLVGDAQF-QLHGGNAIGFMTL 741
Query: 601 SGQKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSK 660
G K+ TD+HS TA +GISR AK+ NY RIYGAG +FA LL+QFNP +++ +
Sbjct: 742 EGSKAAGTDLHSRTASILGISRNDAKVFNYGRIYGAGLKFASTLLRQFNPTLTEKETSQI 801
Query: 661 ARKMYTLTKGKKLYR--LKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQWYGGT 718
A K+Y TKG + R L DG P W GGT
Sbjct: 802 ASKLYKETKGTRTTRKILNDG--------------------------------PFWRGGT 829
Query: 719 ESAMFNRLEEIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLM 778
ES +FN+LEE A +P TP L ++ AL + F+ +RINW +QS VD+LHL+
Sbjct: 830 ESFVFNKLEEFAEQERPRTPALGAGITEALMRRFINKGSFMTSRINWAIQSSGVDYLHLL 889
Query: 779 LVCMRWLVSR---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTD 835
+ M +L+ R D R I++HDEIRYLV +E+KY +A+AL + N+ TRA +++ + D
Sbjct: 890 ITAMDFLIRRFNIDARLAITVHDEIRYLVKEEDKYRSAMALQIANVWTRAMFSQQVGIDD 949
Query: 836 IPLSISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKA 890
+P S +FFS V+ID VLRKE + DC TPS+P IP GE LDI+Q I+K
Sbjct: 950 LPQSCAFFSAVDIDHVLRKEVNMDCVTPSHP------TKIPHGESLDIHQLIEKG 998
>gi|150865746|ref|XP_001385083.2| mitochondrial DNA polymerase catalytic subunit [Scheffersomyces
stipitis CBS 6054]
gi|149387002|gb|ABN67054.2| mitochondrial DNA polymerase catalytic subunit [Scheffersomyces
stipitis CBS 6054]
Length = 1061
Score = 436 bits (1122), Expect = e-119, Method: Compositional matrix adjust.
Identities = 294/909 (32%), Positives = 431/909 (47%), Gaps = 217/909 (23%)
Query: 1 MTDESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTL 60
+ D+ W + + NSL+ V +C K LDK+ R+ F + D+ +N+++LM YCA D
Sbjct: 284 LVDDPWLDHGAPNSLANVLDFHCNVK-LDKSQRDFFSSENPMDVISNFNDLMNYCASDVD 342
Query: 61 ATFEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVT 120
AT F V + LFP FLE+ PHPV+
Sbjct: 343 AT--------------------------------------FAVTKKLFPEFLEKVPHPVS 364
Query: 121 LAGMLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLL--HDDKYKD 178
A + L T LP W Y + + + + D ++ + L + + + +D K K
Sbjct: 365 FAALRHLGTLILPTTTKWDNYISTAEEIYQDNRGQVSANLRTRAIELIQYIEKNDPKLKP 424
Query: 179 SL----WLWDQDWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRR 234
+L WL +W++K+ +LKK T
Sbjct: 425 NLDDDPWLRQLNWTIKEPRLKKDGTPT--------------------------------- 451
Query: 235 ELVEKFKPLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSE 294
+++ GYPEWYR+L D +KQ ++
Sbjct: 452 -----------------AKQAFMTGYPEWYRELF-----KTTDGATKQREMN-------- 481
Query: 295 AWIPGPSLISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTDIKVPDAENIPLEQL 354
++ +ITP LL L W+ PL + GW + KVP E I
Sbjct: 482 --------LTVRTRITPLLLRLKWEGYPLIWTDSQGWCF--------KVPFDEEI----- 520
Query: 355 KQLYNNITKQDNCEANVDNAQNSLRDSVETNISFIDCSKSAKRLEVIANVLDKKKLAEAS 414
TK + QN +R + + K L+++ L
Sbjct: 521 ------FTKLE--------TQNYIRAQL-----------NQKDLDLLLPEL--------- 546
Query: 415 STDTSTDDADTPREIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEI 474
D K+PH DG +S+ ++ F D +L A+ I+ +
Sbjct: 547 --------RDNGNSFELFKVPHPDGAKKRCTQIMSKSYLRYFEDGTLTSEYNYAQEILSL 598
Query: 475 SRMLSYWRNNHERVKKQFVVWLNKKDLPRRLVENIESEGRD---YGVILPQLIVSGTLTR 531
+ SYW N R+ +QFVV+ +K + ++ + E +D G+ILP+L GT+TR
Sbjct: 599 NSAASYWMGNRTRISEQFVVYNDKSGEKNKFFDS-KKEAKDATNMGIILPRLCTMGTITR 657
Query: 532 RAVEATWMTASNAVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHG 591
RA E TW+TASNA R+GSEL+++I+AP GY +GADVDS+ELWIAS++GDS K HG
Sbjct: 658 RATENTWLTASNAKKNRIGSELKSLIEAPPGYCFVGADVDSEELWIASLVGDS-MFKIHG 716
Query: 592 ATPLGWMTLSGQKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPE 651
T LGWM L G K TD+HS TA+ +GISR AK+ NY RIYGAG +FA RLLKQFN +
Sbjct: 717 GTALGWMNLEGDKHEKTDLHSKTAEILGISRGDAKVFNYGRIYGAGVKFATRLLKQFNSK 776
Query: 652 MSKSDAKSKARKMYTLTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDK 711
+S+++A+ A+ +Y TKG+ SKY R +
Sbjct: 777 LSEAEAEETAKLLYARTKGE---------------MSSSKYLKRRL-------------- 807
Query: 712 PQWYGGTESAMFNRLEEIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGA 771
++GGTES MFN LE IA P TP L ++ AL + + + ++ +RINW +QS
Sbjct: 808 --YHGGTESVMFNALESIAYQKNPRTPVLGAAITSALTIDNLNKNSYLTSRINWAIQSSG 865
Query: 772 VDFLHLMLVCMRWLVSR---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCI 828
VD+LHL++V M +L+ + D R I++HDEIRYLV + +KY+ AL L ++N+ TRA
Sbjct: 866 VDYLHLLVVSMEYLIDKYQIDARLSITVHDEIRYLVKESDKYKAALLLQISNVWTRAMFC 925
Query: 829 KKLDMTDIPLSISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTID 888
++L + ++P S +FFS V+ID VLRKE DC TPSNP IP+GE L I Q ++
Sbjct: 926 EQLGIKEVPQSCAFFSEVDIDHVLRKEVSMDCVTPSNP------KAIPVGESLGINQLLE 979
Query: 889 K-ANGVIGT 896
NG I T
Sbjct: 980 VCGNGDILT 988
>gi|226294174|gb|EEH49594.1| DNA polymerase gamma [Paracoccidioides brasiliensis Pb18]
Length = 1183
Score = 436 bits (1122), Expect = e-119, Method: Compositional matrix adjust.
Identities = 288/892 (32%), Positives = 419/892 (46%), Gaps = 215/892 (24%)
Query: 3 DESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLAT 62
+E W SS+NSL +V K +C +DK+ R+ F E + L+ YCA D
Sbjct: 365 EELWVGRSSINSLRDVAKFHC-NITIDKSQRDYFGELDRSAVLERLDELIDYCAAD---- 419
Query: 63 FEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLA 122
V++ T + + +FP FLE PHPV+
Sbjct: 420 ------------------VSI----------------THRIYKRVFPSFLEVCPHPVSFG 445
Query: 123 GMLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDK-YKDSLW 181
+ LS+ LPVNN W +Y + +T+ L +++ L++ C++A ++ + + Y+ W
Sbjct: 446 ALRHLSSVILPVNNTWDEYLKNAEETYQRLLEDVQKRLLELCNRAVAVKDNPEIYEKDPW 505
Query: 182 LWDQDWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRRELVEKFK 241
L DWS +++++ K K V
Sbjct: 506 LRQLDWSGQEIRMVKGKKKGDPVR------------------------------------ 529
Query: 242 PLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIPGPS 301
P L G P+WY+ G+ TS + I
Sbjct: 530 ---------PAARQKLPGMPKWYK----------------------GLFPTSTSAIN--- 555
Query: 302 LISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTDIKVPDAENIPLEQLKQLYNNI 361
+S ++ P LL L+W PL + +GW + +P ++LK+ N
Sbjct: 556 -LSVRTRLAPILLKLSWLGYPLFWSDMYGWTF--------------QVPKKELKKFENQA 600
Query: 362 TKQDNCEANVDNAQNSLRDSVETNISFIDCSKSAKRLEVIANVLDKKKLAEASSTDTSTD 421
+ C+ L+K L +
Sbjct: 601 V--NPCDM----------------------------------ALEKNPLLQND------- 617
Query: 422 DADTPREIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEISRMLSYW 481
RE + KLPHKDG NPL++ ++ F +L+ AK +E++ SYW
Sbjct: 618 -----REHVYFKLPHKDGPESRCVNPLAKGYLQYFEGGTLSSKFDLAKEALEMNASCSYW 672
Query: 482 RNNHERVKKQFVVWLNKKDLPRRLVENIESEGRDYGVILPQLIVSGTLTRRAVEATWMTA 541
+ +R+ Q VV+ N D+ + ++ G ILPQ+I GT+TRRAVE TW+TA
Sbjct: 673 ISARDRITSQMVVYQN--DIEKLTGRSLSDPSLKQGFILPQVIPMGTITRRAVENTWLTA 730
Query: 542 SNAVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLS 601
SNA RVGSEL+AM++AP GY +GADVDS+ELWIAS++GD+ + HG +G+MTL
Sbjct: 731 SNAKANRVGSELKAMVRAPPGYVFVGADVDSEELWIASLVGDAQF-QIHGGNAIGFMTLE 789
Query: 602 GQKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKA 661
G K+ TD+HS TAK +GISR AK+ NY RIYGAG +FA LL+QFNP M + K A
Sbjct: 790 GTKAAGTDLHSKTAKILGISRNDAKVFNYGRIYGAGLKFAATLLRQFNPSMPEQQTKEVA 849
Query: 662 RKMYTLTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQWYGGTESA 721
K+Y TKG + T+ ++ D+P W GGTES
Sbjct: 850 SKLYKETKGAR------------------------------TNRKQLSDRPFWRGGTESF 879
Query: 722 MFNRLEEIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLVC 781
+FN+LEE A +P TP L ++ AL + F+ +RINW +QS VD+LHL+++
Sbjct: 880 VFNKLEEFAEQERPRTPVLGAGITEALMRRFINKGSFMTSRINWAIQSSGVDYLHLLIIS 939
Query: 782 MRWLVSR---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIPL 838
M +L+ R D R I++HDEIRYLV D +KY A+AL V NL TRA +++ + D+P
Sbjct: 940 MDFLIRRFNLDARLAITVHDEIRYLVRDHDKYRAAMALQVANLWTRAMFSQEMGIDDLPQ 999
Query: 839 SISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKA 890
S ++FS V+IDKVLRKE D DC TPS+P IP GE LDI + K
Sbjct: 1000 SCAYFSAVDIDKVLRKEVDMDCITPSHP------NKIPHGESLDIESLLAKG 1045
>gi|190345004|gb|EDK36807.2| hypothetical protein PGUG_00905 [Meyerozyma guilliermondii ATCC
6260]
Length = 1209
Score = 436 bits (1122), Expect = e-119, Method: Compositional matrix adjust.
Identities = 293/905 (32%), Positives = 429/905 (47%), Gaps = 228/905 (25%)
Query: 1 MTDESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTL 60
++D+ W N S NSL+ V K +C G +DK+DR F +DI +N+ LM YCAKD
Sbjct: 288 LSDDPWLNKGSPNSLASVAKFHC-GIDVDKSDREFFETTEPQDIIDNFDMLMDYCAKDVD 346
Query: 61 ATFEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVT 120
AT F++ LFP F ++ PHPV+
Sbjct: 347 AT--------------------------------------FKITAELFPRFRKKIPHPVS 368
Query: 121 LAGMLELSTAYLPVNNNWVKYFN--ESCQTFNDLNVEMKSLLMDKCDQACSLLHDDK--- 175
A + L T LP W Y + E C N V +L ++ + S + +
Sbjct: 369 FAALRHLGTLVLPTTKKWDSYVSTAEDCYLHNRQQVS--EILRERANSLVSFVEAKEPLP 426
Query: 176 -YKDSLWLWDQDWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRR 234
D WL DW++K+ + KK NGE
Sbjct: 427 DVSDDPWLRQLDWTLKEQRFKK-----------------------NGE------------ 451
Query: 235 ELVEKFKPLMQTKDRLPV-NSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTS 293
PV ++L GYPEWYR L +K++ ++
Sbjct: 452 ----------------PVAKQAFLTGYPEWYRDLFR----------NKEKEMN------- 478
Query: 294 EAWIPGPSLISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYST-DIKVPDAENIPLE 352
IS +ITP LL L W+ PL + GW + VP T ++K A+N L
Sbjct: 479 ---------ISVRTRITPLLLKLKWEGYPLLWTDSAGWCFKVPDETKEVKRMAAKNYTLA 529
Query: 353 QLKQLYNNITKQDNCEANVDNAQNSLRDSVETNISFIDCSKSAKRLEVIANVLDKKKLAE 412
+ ++++D+ SL D + N +
Sbjct: 530 K-------LSEEDH---------ESLLDELRDNGHY------------------------ 549
Query: 413 ASSTDTSTDDADTPREIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRII 472
K+PH +G + LS+ ++ F + L+ A+ I+
Sbjct: 550 -----------------QLFKIPHPEGPSKRCTSVLSKSYLRYFENGVLSSEYEYAQDIL 592
Query: 473 EISRMLSYWRNNHERVKKQFVVWLNKKDLPRRLVENIESEGRDY---GVILPQLIVSGTL 529
++ SYW N R+ QFVV+ + + + + + + R++ G+ILP+L GT+
Sbjct: 593 RLNSEASYWMGNRNRILDQFVVYSDTSG-SKNMFFDTKVKSREHPEMGIILPKLCSMGTI 651
Query: 530 TRRAVEATWMTASNAVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKE 589
TRRA E TW+TASN+ R+GSEL+AMI+AP GY+ +GADVDS+ELWIAS++GDS K
Sbjct: 652 TRRATENTWLTASNSKSNRIGSELKAMIEAPQGYAFVGADVDSEELWIASLVGDS-MFKI 710
Query: 590 HGATPLGWMTLSGQKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFN 649
HG T LGWMTL G K+ TD+HS TA+ +GISR AK+ NY RIYGAG +FA LLKQFN
Sbjct: 711 HGGTALGWMTLEGDKNEGTDLHSKTAEILGISRNDAKVFNYGRIYGAGVKFATTLLKQFN 770
Query: 650 PEMSKSDAKSKARKMYTLTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIF 709
E++ + A A+ +Y TKG+ T K
Sbjct: 771 SELTDAAALKVAQDLYARTKGQ-------------------------------TGKSKFL 799
Query: 710 DKPQWYGGTESAMFNRLEEIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQS 769
D+P ++GGTES MFN LE IA P TP L ++ AL + + + ++ +RINW +QS
Sbjct: 800 DRPMYHGGTESVMFNALEAIAYQDDPRTPVLGAAITDALSKKNLNKNNYMTSRINWAIQS 859
Query: 770 GAVDFLHLMLVCMRWLVSR---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAF 826
VD+LHL+L+ M +L++R D R ++++HDEIRY+V +++KY+ AL L V+NL TRA
Sbjct: 860 SGVDYLHLLLISMEYLIARYQVDARLILTVHDEIRYMVKEDQKYKLALLLQVSNLWTRAM 919
Query: 827 CIKKLDMTDIPLSISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQT 886
+++ + ++P S +FFS V+ID VLRKE DC TPS+P IP GE I Q
Sbjct: 920 FCEQMGLKEVPQSCAFFSEVDIDHVLRKEVTMDCVTPSHP------DSIPPGEKYTIRQL 973
Query: 887 IDKAN 891
++K +
Sbjct: 974 LEKCD 978
>gi|121713882|ref|XP_001274552.1| DNA polymerase gamma [Aspergillus clavatus NRRL 1]
gi|119402705|gb|EAW13126.1| DNA polymerase gamma [Aspergillus clavatus NRRL 1]
Length = 1134
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 289/891 (32%), Positives = 422/891 (47%), Gaps = 217/891 (24%)
Query: 3 DESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLAT 62
+E W SS+NSL +V K +C+ +DK+ R+ F E I L+ YCA D T
Sbjct: 327 EELWVGRSSVNSLRDVAKFHCD-VTIDKSQRDYFGELDRHQILEKLEELLDYCAADVAIT 385
Query: 63 FEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLA 122
V + + FP FLE PHPV+
Sbjct: 386 HRVYKKV--------------------------------------FPNFLEVCPHPVSFG 407
Query: 123 GMLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHD-DKYKDSLW 181
+ LS+ LPVN +W +Y + T++ +++ L++ C++A + + D Y + W
Sbjct: 408 ALRHLSSVILPVNQSWKEYLTNAETTYHQRLDDVQRKLIELCNEALKVKDNPDVYMNDAW 467
Query: 182 LWDQDWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRRELVEKFK 241
L DWS +++K+ K K +P R + K
Sbjct: 468 LQQLDWSGQEIKMVKGKKKG--------DPP---------------------RPAARQKK 498
Query: 242 PLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIPGPS 301
P G P+WY+ L ++A
Sbjct: 499 P----------------GMPQWYKDLFPSSNAAIN------------------------- 517
Query: 302 LISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTDIKVPDAENIPLEQLKQLYNNI 361
++ +I P LL L+W PL + GW + VP + +V EN P+ + ++
Sbjct: 518 -LTVRTRIAPLLLKLSWSGYPLTWSDKFGWTFKVP---NDQVKKFENQPV-----VICDM 568
Query: 362 TKQDNCEANVDNAQNSLRDSVETNISFIDCSKSAKRLEVIANVLDKKKLAEASSTDTSTD 421
+ + N E LRD D+K +
Sbjct: 569 SDEKNVE---------LRD-------------------------DRKHV----------- 583
Query: 422 DADTPREIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEISRMLSYW 481
+ KLPHKDG NPL++ ++ F +L+ AK ++++ SYW
Sbjct: 584 ---------YFKLPHKDGPQARCVNPLAKSYMQHFERGTLSSQYALAKEALDMNASCSYW 634
Query: 482 RNNHERVKKQFVVWLNKKDLPRRLVENIESEGRDYGVILPQLIVSGTLTRRAVEATWMTA 541
+ +R+ Q VV+ ++ R +++ + G ILPQ+I GT+TRRAVE TW+TA
Sbjct: 635 ISARDRIMSQIVVYEDQV----REMKSADGAANRLGFILPQIIPMGTITRRAVENTWLTA 690
Query: 542 SNAVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLS 601
SNA RVGSEL+AMI+AP GY +GADVDSQELWIAS++GD+ + HG +G+MTL
Sbjct: 691 SNAKANRVGSELKAMIKAPPGYVFVGADVDSQELWIASLVGDAQF-QLHGGNAIGFMTLE 749
Query: 602 GQKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKA 661
G K+ TDMHS TA +GISR AK+ NY RIYGAG +FA LL+QFNP MS+ + + A
Sbjct: 750 GSKAAGTDMHSRTAHILGISRNDAKVFNYGRIYGAGLKFAATLLRQFNPSMSEKETQEVA 809
Query: 662 RKMYTLTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQWYGGTESA 721
K+Y TKG + R R+ S + P W GGTES
Sbjct: 810 SKLYKETKGARTSR-----------RILS-------------------ENPFWRGGTESF 839
Query: 722 MFNRLEEIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLVC 781
+FN+LEE A +P TP L ++ AL + F+ +RINW +QS VD+LHL+++
Sbjct: 840 VFNKLEEFAEQERPRTPALGAGITEALMRRFINKGSFMTSRINWAIQSSGVDYLHLLIIA 899
Query: 782 MRWLVSR---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIPL 838
M +++ R R I++HDEIRYLV +E+KY A+AL V N+ TRA +++ + D+P
Sbjct: 900 MDYIIRRYNIGARLAITVHDEIRYLVKEEDKYRAAMALQVANVWTRAMFSQQVGIDDLPQ 959
Query: 839 SISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDK 889
S ++FS V+ID VLRKE D DC TPS+P + IP GE LDI Q + K
Sbjct: 960 SCAYFSAVDIDHVLRKEVDMDCVTPSHP------HKIPHGESLDISQLLKK 1004
>gi|255727248|ref|XP_002548550.1| DNA polymerase gamma [Candida tropicalis MYA-3404]
gi|240134474|gb|EER34029.1| DNA polymerase gamma [Candida tropicalis MYA-3404]
Length = 1268
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 286/900 (31%), Positives = 419/900 (46%), Gaps = 216/900 (24%)
Query: 4 ESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLATF 63
+ W S NSL+ V +C + LDK DR F + + + N +H LM YCA D +A
Sbjct: 345 DPWLLKGSPNSLANVANFHCNIE-LDKHDRKDFESENPQLLINRFHKLMNYCANDVMA-- 401
Query: 64 EVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLAG 123
TFEV + LFP+FL R PHPV+ A
Sbjct: 402 ------------------------------------TFEVTKKLFPVFLSRVPHPVSFAA 425
Query: 124 MLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDK------YK 177
+ L LP W KY + + E+ S L ++ ++ + K Y+
Sbjct: 426 LRHLGNLILPTTTKWSKYLESAESCYQKNRTEVTSTLEERANELVQFVIQQKSELIPDYE 485
Query: 178 DSLWLWDQDWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRRELV 237
WL +W++K KLKK
Sbjct: 486 QDPWLSQLNWTLKQAKLKKDGT-------------------------------------- 507
Query: 238 EKFKPLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWI 297
LP +YL GYPEWYR L + +
Sbjct: 508 ------------LPKKVAYLTGYPEWYRDLFKSTGGREMN-------------------- 535
Query: 298 PGPSLISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTDIKVPDAENIPLEQLKQL 357
+S +ITP LL L W+ PL ++ GW + KVP ++ +E+L+
Sbjct: 536 -----LSLRTRITPLLLRLKWEGYPLFWVNSQGWCF--------KVPYGDDEVIEKLE-- 580
Query: 358 YNNITKQDNCEANVDNAQNSLRDSV-ETNISFIDCSKSAKRLEVIANVLDKKKLAEASST 416
A+N ++ + E + +D ++ + V+
Sbjct: 581 ----------------AKNYIQPQLPEEEMDILDSLRANGKAYVL--------------- 609
Query: 417 DTSTDDADTPREIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEISR 476
K+PH DG + LS+ ++ F D +L A +I++++
Sbjct: 610 ---------------FKVPHPDGPKARCTHILSKQYVRYFEDGTLTSEYEHASKILKLNN 654
Query: 477 MLSYWRNNHERVKKQFVVWLNKKDLPRRLVENIESEGRDYGVILPQLIVSGTLTRRAVEA 536
SYW +N R+ QFVV+ + E ++ +ILP L GT+TRRA E
Sbjct: 655 EASYWLSNRNRIMDQFVVYNQSSKTKFFDTKKQIKEHKEMAIILPNLATMGTITRRATEN 714
Query: 537 TWMTASNAVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLG 596
TW+TASNA R+GSEL+A+I+AP GY IGADVDS+ELWIAS++GDS + HG T LG
Sbjct: 715 TWLTASNAKKNRIGSELKALIEAPKGYCFIGADVDSEELWIASLVGDS-MFEIHGGTALG 773
Query: 597 WMTLSGQKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSD 656
WMTL G+KS TD+HS T+ +GISR AK+ NY RIYGAG +FA RLLKQFN +S +
Sbjct: 774 WMTLEGEKSQKTDLHSKTSSILGISRNDAKVFNYGRIYGAGIKFASRLLKQFNNSISDKE 833
Query: 657 AKSKARKMYTLTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQWYG 716
A A+K+Y TKG + R SK+ +N + K++ YG
Sbjct: 834 ANEIAKKLYDNTKG-------------MTGR--SKH--------FNNNQPKLY-----YG 865
Query: 717 GTESAMFNRLEEIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLH 776
G+ES MFN LE IA +P TP L R++ AL + ++ ++ +R+NW +QS VD+LH
Sbjct: 866 GSESVMFNALEAIAQQDEPKTPVLGARITDALNVKNLKNNNYMTSRVNWTIQSSGVDYLH 925
Query: 777 LMLVCMRWLVSR----DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLD 832
L+++ M +L + D R I++HDE+RYLV + +KY+ AL L ++N+ TRA ++L
Sbjct: 926 LLIISMEYLCEKYGIEDARLAITVHDELRYLVKENDKYKAALLLQISNVWTRAMFCEQLG 985
Query: 833 MTDIPLSISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKANG 892
+ ++P S +FFS V+ID +LRKE DC TPSNP IP GE ++I +++ N
Sbjct: 986 IKEVPQSCAFFSEVDIDFILRKEVSMDCVTPSNP------TPIPSGESMNILGLLERCNN 1039
>gi|225684515|gb|EEH22799.1| DNA polymerase gamma [Paracoccidioides brasiliensis Pb03]
Length = 1220
Score = 436 bits (1120), Expect = e-119, Method: Compositional matrix adjust.
Identities = 290/894 (32%), Positives = 419/894 (46%), Gaps = 219/894 (24%)
Query: 3 DESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLAT 62
+E W SS+NSL +V K +C +DK+ R+ F E + L+ YCA D
Sbjct: 402 EELWVGRSSINSLRDVAKFHC-NITIDKSQRDYFGELDRSAVLERLDELIDYCAAD---- 456
Query: 63 FEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLA 122
V++ T + + +FP FLE PHPV+
Sbjct: 457 ------------------VSI----------------THRIYKRVFPNFLEVCPHPVSFG 482
Query: 123 GMLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDK---YKDS 179
+ LS+ LPVNN W +Y + +T+ L +++ L++ C++A ++ DK Y+
Sbjct: 483 ALRHLSSVILPVNNTWDEYLKNAEETYQRLLEDVQKRLLELCNRAVAV--KDKPEIYEKD 540
Query: 180 LWLWDQDWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRRELVEK 239
WL DWS +++++ K K V
Sbjct: 541 PWLRQLDWSGQEIRMVKGKKKGDPVR---------------------------------- 566
Query: 240 FKPLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIPG 299
P L G P+WY+ G+ TS + I
Sbjct: 567 -----------PAARQKLPGMPKWYK----------------------GLFPTSTSAIN- 592
Query: 300 PSLISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTDIKVPDAENIPLEQLKQLYN 359
+S ++ P LL L+W PL + +GW + +P ++LK+ N
Sbjct: 593 ---LSVRTRLAPILLKLSWLGYPLFWSDMYGWTF--------------QVPKKELKKFEN 635
Query: 360 NITKQDNCEANVDNAQNSLRDSVETNISFIDCSKSAKRLEVIANVLDKKKLAEASSTDTS 419
+ C+ L+K L +
Sbjct: 636 QAV--NPCDM----------------------------------ALEKNPLLQND----- 654
Query: 420 TDDADTPREIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEISRMLS 479
RE + KLPHKDG NPL++ ++ F +L+ AK +E++ S
Sbjct: 655 -------REHVYFKLPHKDGPESRCVNPLAKGYLQYFEGGTLSSQFDLAKEALEMNASCS 707
Query: 480 YWRNNHERVKKQFVVWLNKKDLPRRLVENIESEGRDYGVILPQLIVSGTLTRRAVEATWM 539
YW + +R+ Q VV+ N D+ + ++ G ILPQ+I GT+TRRAVE TW+
Sbjct: 708 YWISARDRITSQMVVYQN--DIEKLTGRSLSDPSLKQGFILPQVIPMGTITRRAVENTWL 765
Query: 540 TASNAVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMT 599
TASNA RVGSEL+AM++AP GY +GADVDS+ELWIAS++GD+ + HG +G+MT
Sbjct: 766 TASNAKANRVGSELKAMVRAPPGYVFVGADVDSEELWIASLVGDAQF-QIHGGNAIGFMT 824
Query: 600 LSGQKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKS 659
L G K+ TD+HS TAK +GISR AK+ NY RIYGAG +FA LL+QFNP M + K
Sbjct: 825 LEGTKAAGTDLHSKTAKILGISRNDAKVFNYGRIYGAGLKFAATLLRQFNPSMPEQQTKE 884
Query: 660 KARKMYTLTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQWYGGTE 719
A K+Y TKG + T+ ++ D+P W GGTE
Sbjct: 885 VASKLYKETKGAR------------------------------TNRKQLSDRPFWRGGTE 914
Query: 720 SAMFNRLEEIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLML 779
S +FN+LEE A +P TP L ++ AL + F+ +RINW +QS VD+LHL++
Sbjct: 915 SFVFNKLEEFAEQERPRTPVLGAGITEALMRRFINKGSFMTSRINWAIQSSGVDYLHLLI 974
Query: 780 VCMRWLVSR---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDI 836
+ M +L+ R D R I++HDEIRYLV D +KY A+AL V NL TRA +++ + D+
Sbjct: 975 ISMDFLIRRFNLDARLAITVHDEIRYLVRDHDKYRAAMALQVANLWTRAMFSQEMGIDDL 1034
Query: 837 PLSISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKA 890
P S ++FS V+IDKVLRKE D DC TPS+P IP GE LDI + K
Sbjct: 1035 PQSCAYFSAVDIDKVLRKEVDMDCITPSHP------NKIPHGESLDIESLLAKG 1082
>gi|189208179|ref|XP_001940423.1| DNA polymerase gamma [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187976516|gb|EDU43142.1| DNA polymerase gamma [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 1526
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 292/904 (32%), Positives = 416/904 (46%), Gaps = 224/904 (24%)
Query: 3 DESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLAT 62
+E W S++NSL +V K +C LDK R F E + L+ YCAKD
Sbjct: 686 EELWMGRSAINSLRDVAKFHCNIN-LDKAQREYFGELDRAGVREKLDELLDYCAKD---- 740
Query: 63 FEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLA 122
+E+ T +V Q +FPLFLE PHPV+ A
Sbjct: 741 ------------------------VEI----------THQVYQKVFPLFLETCPHPVSFA 766
Query: 123 GMLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDK-YKDSLW 181
+ L++ LP+N W Y + T+ L+ +++ L+ ++A + + Y + W
Sbjct: 767 ALRFLASVILPINETWDVYLKNAEGTYRHLDDAVRARLVALTEKALEVKEQPEVYNNDPW 826
Query: 182 LWDQDWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRRELVEKFK 241
L DWS +++K+ K K ++P R + K
Sbjct: 827 LSQLDWSGQEIKMVKGKKK--------DDPP---------------------RPAARQKK 857
Query: 242 PLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIPGPS 301
P G P+WY+ L K SD GP
Sbjct: 858 P----------------GMPKWYKDLFAK-------------------SD-------GPM 875
Query: 302 LISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTDIKVPDAENIPLEQLKQLYNNI 361
++ +ITP LL L W PL + HGW Y VP
Sbjct: 876 TLTVRTRITPILLKLAWDGHPLVWSDKHGWTYKVP------------------------- 910
Query: 362 TKQDNCEANVDNAQNSLRDSVETNISFIDCSKSAKRLEVIANVLDKKKLAEASSTDTSTD 421
D A D L S E N+ D +++A
Sbjct: 911 --MDEVFAYNDKGMKQLDMSEEENLKLRDDTENA-------------------------- 942
Query: 422 DADTPREIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEISRMLSYW 481
+ K+PHKDG NPL++ ++ F L AK +E++ SYW
Sbjct: 943 ---------YFKIPHKDGPLARCANPLAKGYLQYFEKGKLGSEYTYAKEALEMNASCSYW 993
Query: 482 RNNHERVKKQFVVWLNKKDLPRR---------LVENIESEGRDYGVILPQLIVSGTLTRR 532
+ +R+ Q VV+ KD+P++ + +G+ G ILPQ+I GT+TRR
Sbjct: 994 ISARDRIMSQMVVY--DKDVPKKSKVSKAPKLTSASTAPKGKKVGFILPQIIPMGTITRR 1051
Query: 533 AVEATWMTASNAVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGA 592
+VE TW+TASNA RVGSEL++M++AP GY +GADVDSQELWIAS+IGD+ + HG
Sbjct: 1052 SVENTWLTASNAKKNRVGSELKSMVRAPKGYCFVGADVDSQELWIASLIGDA-TFQLHGG 1110
Query: 593 TPLGWMTLSGQKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEM 652
+G+MTL G K+ TD+HS TA +GISR AK+ NY RIYGAG +FA LL+QFNP +
Sbjct: 1111 NAVGFMTLEGTKAAGTDLHSRTAAILGISRNDAKVFNYGRIYGAGLKFASTLLRQFNPSL 1170
Query: 653 SKSDAKSKARKMYTLTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKP 712
+ + A +Y TKG K R ++L +R +
Sbjct: 1171 TDAQTTKTAEDLYKNTKGMKTNR------KQLHERSF----------------------- 1201
Query: 713 QWYGGTESAMFNRLEEIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAV 772
W GGTES +FN+LE+ A +P TP L ++ AL+ F+ +RINW +QS V
Sbjct: 1202 -WRGGTESFVFNKLEDFAEQERPRTPVLGAAITEALQRRYLSKGGFMTSRINWAIQSSGV 1260
Query: 773 DFLHLMLVCMRWLVSR---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIK 829
D+LHL++V M +L R D R I++HDEIRYLV +E+KY+ A+AL + N+ TRA +
Sbjct: 1261 DYLHLLIVSMDYLTRRFNLDCRLSITVHDEIRYLVKEEDKYKAAMALQIANVWTRAMFSQ 1320
Query: 830 KLDMTDIPLSISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDK 889
++ + ++P S ++FS V+ID VLRKE D DC TPSN IP GE LDI +DK
Sbjct: 1321 QMGINELPQSCAYFSAVDIDHVLRKEVDMDCITPSN------KDAIPHGESLDIMALLDK 1374
Query: 890 ANGV 893
Sbjct: 1375 GRAA 1378
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 90/219 (41%), Gaps = 40/219 (18%)
Query: 3 DESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLAT 62
+E W S++NSL +V K +C LDK R F E + L+ YCAKD T
Sbjct: 285 EELWMGRSAINSLRDVAKFHCNIN-LDKAQREYFGELDRAGVREKLDELLDYCAKDVEIT 343
Query: 63 FEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLA 122
+V Q +FPLFLE PHPV+ A + RF
Sbjct: 344 HQVYQKVFPLFLETCPHPVSFAAL---------------------------RF------- 369
Query: 123 GMLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDK-YKDSLW 181
L++ LP+N W Y + T+ L+ +++ L+ ++A + + Y + W
Sbjct: 370 ----LASVILPINETWDVYLKNAEGTYRHLDDAVRARLVALTEKALEVKEQPEVYNNDPW 425
Query: 182 LWDQDWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKN 220
L D + L + + +TE P E ++++
Sbjct: 426 LSQLDCPIGVQHLSSHIHAQVFPGAKTEPPPELVALSED 464
>gi|255953429|ref|XP_002567467.1| Pc21g04210 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211589178|emb|CAP95318.1| Pc21g04210 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 1142
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 291/893 (32%), Positives = 425/893 (47%), Gaps = 220/893 (24%)
Query: 3 DESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLAT 62
+E W SS+NSL +V K +C+ +DK R+ F E + I L+ YCA D T
Sbjct: 326 EELWVGRSSVNSLRDVAKFHCD-VTIDKAQRDFFGELDRDSIVGRLEELLDYCAADVAIT 384
Query: 63 FEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLA 122
V + + FP FLE PHPV+
Sbjct: 385 HRVYRKV--------------------------------------FPNFLETCPHPVSFG 406
Query: 123 GMLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDK---YKDS 179
+ LS+ LPVN +W +Y + +T++ +++S L+ CD+A L + D+ Y +
Sbjct: 407 ALRHLSSVILPVNQSWGEYLASAEETYHKRLDDVQSKLLALCDEA--LKYKDQPNFYTND 464
Query: 180 LWLWDQDWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRRELVEK 239
WL DWS +++K+ K K G+ R +
Sbjct: 465 PWLQQLDWSGQEIKMAKG--------------------KKKGDPP---------RPAARQ 495
Query: 240 FKPLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIPG 299
KP G P+WY+ L S++ ++
Sbjct: 496 KKP----------------GMPKWYKDL----FSSNAAEIN------------------- 516
Query: 300 PSLISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTDIKVPDAENIPLEQLKQLYN 359
++ +I P LL L+W + PL + HGW + VP ++ EN P+ +
Sbjct: 517 ---LTVRTRIAPILLKLSWDNYPLVWSDLHGWTFRVPRD---QIKQYENQPV-----VMC 565
Query: 360 NITKQDNCEANVDNAQNSLRDSVETNISFIDCSKSAKRLEVIANVLDKKKLAEASSTDTS 419
++T++ N E LRD
Sbjct: 566 DMTEEKNTE---------LRDD-------------------------------------- 578
Query: 420 TDDADTPREIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEISRMLS 479
R+ + K+PHKDG NPL + ++ F L+ AK+ ++++ S
Sbjct: 579 -------RKATYFKIPHKDGPQARCTNPLGKGYMQYFERGILSSQYELAKQALDMNASCS 631
Query: 480 YWRNNHERVKKQFVVWLNKKDLPRRLVENIESEGRDYGVILPQLIVSGTLTRRAVEATWM 539
YW + +R+ Q VV+ ++ R +N S+ R G ILPQ+I GT+TRRAVE TW+
Sbjct: 632 YWISARDRIMGQIVVYEDQVRQGDR--KNKASDNR-VGFILPQVIPMGTITRRAVENTWL 688
Query: 540 TASNAVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMT 599
TASNA RVGSEL+AMI+AP GYS +GADVDSQELWIAS++GD+ + HG +G+M
Sbjct: 689 TASNAKANRVGSELKAMIKAPPGYSFVGADVDSQELWIASLVGDA-SFQIHGGNAIGFMC 747
Query: 600 LSGQKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKS 659
L G K+ TD+HS +A +GISR AK+ NY RIYGAG +FA LL+QFNP +++ +
Sbjct: 748 LEGSKAEGTDLHSRSASILGISRNDAKVFNYGRIYGAGVKFAATLLRQFNPSLTEKQTQE 807
Query: 660 KARKMYTLTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQWYGGTE 719
A+ +Y TKG + TS + + P W GGTE
Sbjct: 808 TAKNLYKETKGTR------------------------------TSRRLLSETPFWRGGTE 837
Query: 720 SAMFNRLEEIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLML 779
S +FN+LEE A +P TP L ++ AL + F+ +RINW +QS VD+LHL++
Sbjct: 838 SFVFNKLEEFADQERPRTPALGAGITEALMRRFINKGSFMTSRINWAIQSSGVDYLHLLI 897
Query: 780 VCMRWLVSR---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDI 836
V M +L+ + R I++HDEIRYLV DE++Y A+AL V N+ TRA +++ + D+
Sbjct: 898 VSMDYLIRQYNIKARLAITVHDEIRYLVKDEDRYRAAMALQVANVWTRALFSQQVGIDDL 957
Query: 837 PLSISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDK 889
P S ++FS V+ID VLRKE D DC TPS+P Y IP GE LDI Q +DK
Sbjct: 958 PQSCAYFSAVDIDHVLRKEVDMDCVTPSHP------YTIPHGETLDITQLLDK 1004
>gi|448099067|ref|XP_004199060.1| Piso0_002465 [Millerozyma farinosa CBS 7064]
gi|359380482|emb|CCE82723.1| Piso0_002465 [Millerozyma farinosa CBS 7064]
Length = 1289
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 292/906 (32%), Positives = 424/906 (46%), Gaps = 218/906 (24%)
Query: 1 MTDESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTL 60
+ D+ W + S NSL+ V +C K +DKTDR+ F DI +N++NLM YCAKD
Sbjct: 314 LIDDPWLSKGSPNSLANVADFHCNIK-MDKTDRDFFSSMDPLDIISNFNNLMDYCAKDVE 372
Query: 61 ATFEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVT 120
AT YL V LF F E+ PHPV+
Sbjct: 373 AT------------------------------YL--------VSAKLFSEFREKIPHPVS 394
Query: 121 LAGMLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCD--------QACSLLH 172
A + L T LP W+ Y + + + E+ +L ++ + Q SL+
Sbjct: 395 FAALRHLGTLMLPTTKKWLSYIENAEKIYQKNRDEVCQILKERANCYVEYIEKQDVSLMP 454
Query: 173 DDKYKDSLWLWDQDWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKR 232
D Y+D WL DWS K ++KK +
Sbjct: 455 D--YEDDPWLSQLDWSYKQPRIKKDGTPS------------------------------- 481
Query: 233 RRELVEKFKPLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVS-KQELIHDGISD 291
N ++L GYPEWYR L H D+ KQ I+
Sbjct: 482 -------------------ANQAFLTGYPEWYRDL----HKLIVDSKGVKQRTIN----- 513
Query: 292 TSEAWIPGPSLISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTDIKVPDAENIPL 351
++T +ITP LL L W+ PL + GW + VP+
Sbjct: 514 -----------VTTRTRITPLLLKLKWEGYPLFWTDSAGWCFKVPF-------------- 548
Query: 352 EQLKQLYNNITKQDNCEANVDNAQNSLRDSVETNISFIDCSKSAKRLEVIANVLDKKKLA 411
+DN + I+ RL +++V D +K
Sbjct: 549 ------------KDN--------------------TLIELQAKNYRLAKLSDV-DHEKYF 575
Query: 412 EASSTDTSTDDADTPREIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRI 471
++ DT K+PH +G + L++ +++ F L A I
Sbjct: 576 DSLQKDT--------ERFVLFKVPHPEGPSKRCTSVLAKSYLSFFEKGILTSEFDYASEI 627
Query: 472 IEISRMLSYWRNNHERVKKQFVVWLNKKDLPRRLVENI--ESEGRDYGVILPQLIVSGTL 529
++++ SYW N +R+ QFVV+ + + + E D G+ILP+L GT+
Sbjct: 628 LKLNSTASYWMGNRQRIFDQFVVYSDPSAKKNKFFKTGPERKEHDDMGIILPKLCAMGTI 687
Query: 530 TRRAVEATWMTASNAVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKE 589
TRRA E TW+TASN+ R+GSEL+ MI+AP+GY+ +GADVDS+ELWIA++IGDS
Sbjct: 688 TRRATENTWLTASNSKPNRIGSELKGMIEAPEGYAFVGADVDSEELWIAALIGDSIMGI- 746
Query: 590 HGATPLGWMTLSGQKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFN 649
HGAT LGWMTL G K+ TD+HS TA+ +GISR AK+ NY RIYGAG +FA +LLKQ N
Sbjct: 747 HGATALGWMTLEGDKNEKTDLHSKTAEILGISRNEAKVFNYGRIYGAGVKFATQLLKQCN 806
Query: 650 PEMSKSDAKSKARKMYTLTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIF 709
P +S A+ A ++Y TKG+ S K
Sbjct: 807 PSLSDEQAEEMATELYKRTKGR-------------------------------VSASKAL 835
Query: 710 DKPQWYGGTESAMFNRLEEIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQS 769
++GG+ES +FN LE IA P TP L ++ AL + + + ++ +RINWV+QS
Sbjct: 836 GSRMYHGGSESIIFNTLESIAYGDDPKTPVLGASITDALTAKNLNKNAYLTSRINWVIQS 895
Query: 770 GAVDFLHLMLVCMRWLVSR---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAF 826
VD+LHL++V M +L+ + D R +I++HDE+RYLV +++KY+ A L ++N TRA
Sbjct: 896 SGVDYLHLLIVSMEYLIRKYKVDARLLITVHDELRYLVKEKDKYKVAYLLQISNAWTRAM 955
Query: 827 CIKKLDMTDIPLSISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQT 886
+KL + ++P S +FFS V+ID VLRKE + +C TPS+P IP GE LDI
Sbjct: 956 FCEKLGIKELPQSCAFFSEVDIDFVLRKEVNQECVTPSHP------EKIPPGESLDIRTL 1009
Query: 887 IDKANG 892
++K +G
Sbjct: 1010 LEKCDG 1015
>gi|330907546|ref|XP_003295846.1| hypothetical protein PTT_03429 [Pyrenophora teres f. teres 0-1]
gi|311332479|gb|EFQ96060.1| hypothetical protein PTT_03429 [Pyrenophora teres f. teres 0-1]
Length = 1157
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 291/904 (32%), Positives = 420/904 (46%), Gaps = 224/904 (24%)
Query: 3 DESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLAT 62
+E W S++NSL +V K +C LDK R F E + L+ YCAKD
Sbjct: 317 EELWMGRSAINSLRDVAKFHC-NITLDKAQREYFGELDRAGVREKLDELLDYCAKD---- 371
Query: 63 FEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLA 122
+E+ T +V Q +FPLFLE PHPV+ A
Sbjct: 372 ------------------------VEI----------THQVYQKVFPLFLETCPHPVSFA 397
Query: 123 GMLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDK-YKDSLW 181
+ L++ LP+N W Y + T+ L+ +++ L+ ++A + + Y + W
Sbjct: 398 ALRFLASVILPINETWDVYLKNAEGTYRHLDDAVRARLVALTEKALEVKEQPEVYNNDPW 457
Query: 182 LWDQDWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRRELVEKFK 241
L DWS +++K+ K K +P R + K
Sbjct: 458 LSQLDWSGQEIKMVKGKKKN--------DPP---------------------RPAARQKK 488
Query: 242 PLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIPGPS 301
P G P+WY+ L K SD GP
Sbjct: 489 P----------------GMPKWYKDLFAK-------------------SD-------GPM 506
Query: 302 LISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTDIKVPDAENIPLEQLKQLYNNI 361
++ +ITP LL L W P+ + HGW Y VP D + +KQL ++
Sbjct: 507 NLTVRTRITPILLKLAWDGHPMVWSDKHGWTYKVPMDEVFAYND------KGMKQL--DM 558
Query: 362 TKQDNCEANVDNAQNSLRDSVETNISFIDCSKSAKRLEVIANVLDKKKLAEASSTDTSTD 421
++++N + LRD E NV
Sbjct: 559 SEEENLK---------LRDDTE-------------------NV----------------- 573
Query: 422 DADTPREIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEISRMLSYW 481
+ K+PHKDG NPL++ ++ F L AK +E++ SYW
Sbjct: 574 ---------YFKIPHKDGPLARCANPLAKGYLQYFEKGKLGSEYAYAKEALEMNASCSYW 624
Query: 482 RNNHERVKKQFVVWLNKKDLPRR---------LVENIESEGRDYGVILPQLIVSGTLTRR 532
+ +R+ Q VV+ KD+P++ + + G+ G ILPQ+I GT+TRR
Sbjct: 625 ISARDRIMSQMVVY--DKDVPKKSKVPKAPKLTSASTATRGKKVGFILPQIIPMGTITRR 682
Query: 533 AVEATWMTASNAVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGA 592
+VE TW+TASNA RVGSEL++M++AP GY +GADVDSQELWIAS+IGD+ + HG
Sbjct: 683 SVENTWLTASNAKKNRVGSELKSMVRAPKGYCFVGADVDSQELWIASLIGDA-TFQLHGG 741
Query: 593 TPLGWMTLSGQKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEM 652
+G+MTL G K+ TD+HS TA +GISR AK+ NY RIYGAG +FA LL+QFNP +
Sbjct: 742 NAVGFMTLEGTKAAGTDLHSRTAAILGISRNDAKVFNYGRIYGAGLKFASTLLRQFNPSL 801
Query: 653 SKSDAKSKARKMYTLTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKP 712
+++ A +Y TKG K R ++ ++P
Sbjct: 802 TEAQTTKTAEDLYKNTKGVKTIR------------------------------KQLHERP 831
Query: 713 QWYGGTESAMFNRLEEIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAV 772
W GGTES +FN+LE+ A +P TP L ++ AL+ F+ +RINW +QS V
Sbjct: 832 FWRGGTESFVFNKLEDFAEQERPRTPVLGAAITEALQRRYLSKGGFMTSRINWAIQSSGV 891
Query: 773 DFLHLMLVCMRWLVSR---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIK 829
D+LHL++V M +L R D R I++HDEIRYLV +E+KY+ A+AL + N+ TRA +
Sbjct: 892 DYLHLLIVSMDYLTRRFNLDCRLSITVHDEIRYLVKEEDKYKAAMALQIANVWTRAMFSQ 951
Query: 830 KLDMTDIPLSISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDK 889
++ + +P S ++FS V+ID VLRKE D DC TPSN IP GE LDI + K
Sbjct: 952 QMGINQLPQSCAYFSAVDIDHVLRKEVDMDCITPSN------KDAIPHGESLDIMALLAK 1005
Query: 890 ANGV 893
Sbjct: 1006 GRAA 1009
>gi|119478758|ref|XP_001259434.1| DNA polymerase gamma [Neosartorya fischeri NRRL 181]
gi|119407588|gb|EAW17537.1| DNA polymerase gamma [Neosartorya fischeri NRRL 181]
Length = 1109
Score = 434 bits (1116), Expect = e-118, Method: Compositional matrix adjust.
Identities = 292/891 (32%), Positives = 425/891 (47%), Gaps = 217/891 (24%)
Query: 3 DESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLAT 62
+E W SS+NSL +V K +C+ +DK+ R+ F E + E I L+ YCA D T
Sbjct: 301 EELWVGRSSVNSLRDVAKFHCD-VTIDKSQRDYFGELNREQILGKLEELLDYCAADVAIT 359
Query: 63 FEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLA 122
V + + FP FL+ PHPV+
Sbjct: 360 HRVYKKV--------------------------------------FPNFLDVCPHPVSFG 381
Query: 123 GMLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHD-DKYKDSLW 181
+ LS+ LPVN W +Y + T++ +++ L++ C++A + + D Y + W
Sbjct: 382 ALRHLSSVILPVNETWKEYITNAEATYHQRVDDVQRRLLELCNEALKVKENPDVYTNDPW 441
Query: 182 LWDQDWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRRELVEKFK 241
L DW+ +++K+ K K +P R + K
Sbjct: 442 LRQLDWTGQEIKMVKGKKKG--------DPP---------------------RPAARQKK 472
Query: 242 PLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIPGPS 301
P G P+WY+ +L +D +
Sbjct: 473 P----------------GMPQWYK-----------------DLFPSTTADIN-------- 491
Query: 302 LISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTDIKVPDAENIPLEQLKQLYNNI 361
++ +I P LL L+W PL + GW + VP +V EN P+ + ++
Sbjct: 492 -LTVRTRIAPILLKLSWDGYPLTWSDKFGWTFKVPKD---QVKKFENQPV-----VLCDM 542
Query: 362 TKQDNCEANVDNAQNSLRDSVETNISFIDCSKSAKRLEVIANVLDKKKLAEASSTDTSTD 421
+++ N E LRD D+K +
Sbjct: 543 SEEKNQE---------LRD-------------------------DRKHV----------- 557
Query: 422 DADTPREIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEISRMLSYW 481
+ KLPHKDG NPL++ ++ F +L+ AK +E++ SYW
Sbjct: 558 ---------YFKLPHKDGPQARCVNPLAKGYLQFFERGTLSSQYALAKEALEMNASCSYW 608
Query: 482 RNNHERVKKQFVVWLNKKDLPRRLVENIESEGRDYGVILPQLIVSGTLTRRAVEATWMTA 541
+ +R+ Q VV+ +D ++ E R G ILPQ+I GT+TRRAVE TW+TA
Sbjct: 609 ISARDRIMSQMVVY---EDQVKQSGSTGEKSNR-LGFILPQIIPMGTITRRAVENTWLTA 664
Query: 542 SNAVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLS 601
SNA RVGSEL+AMI+AP GY +GADVDSQELWIAS++GD+ + HG +G+MTL
Sbjct: 665 SNAKANRVGSELKAMIKAPPGYVFVGADVDSQELWIASLVGDAQF-QLHGGNAIGFMTLE 723
Query: 602 GQKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKA 661
G K+ TDMHS TA +GISR AK+ NY RIYGAG +FA LL+QFNP MS+ + + A
Sbjct: 724 GSKAAGTDMHSRTAHILGISRNDAKVFNYGRIYGAGVKFAATLLRQFNPSMSEKETQEVA 783
Query: 662 RKMYTLTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQWYGGTESA 721
K+Y TKG + R R+ S + P W GGTES
Sbjct: 784 TKLYRETKGTRTTR-----------RILS-------------------ENPFWRGGTESF 813
Query: 722 MFNRLEEIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLVC 781
+FN+LEE A +P TP L ++ AL + F+ +RINW +QS VD+LHL+++
Sbjct: 814 VFNKLEEFADQERPRTPALGAGITEALMRRFINKGSFMTSRINWAIQSSGVDYLHLLIIS 873
Query: 782 MRWLVSR---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIPL 838
M +L+ R D R I++HDEIRYLV +E+KY A+AL V N+ TRA +++ + D+P
Sbjct: 874 MDYLIRRFNIDARLAITVHDEIRYLVKEEDKYRAAMALQVANVWTRAMFSQQVGIDDLPQ 933
Query: 839 SISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDK 889
S ++FS V+ID VLRKE D DC TPS+P + IP GE LDI + ++K
Sbjct: 934 SCAYFSAVDIDHVLRKEVDMDCVTPSHP------HKIPHGESLDISRLLEK 978
>gi|146423193|ref|XP_001487528.1| hypothetical protein PGUG_00905 [Meyerozyma guilliermondii ATCC
6260]
Length = 1209
Score = 433 bits (1114), Expect = e-118, Method: Compositional matrix adjust.
Identities = 292/905 (32%), Positives = 427/905 (47%), Gaps = 228/905 (25%)
Query: 1 MTDESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTL 60
++D+ W N S NSL+ V K +C G +DK+DR F +DI +N+ LM YCAKD
Sbjct: 288 LSDDPWLNKGSPNSLASVAKFHC-GIDVDKSDREFFETTEPQDIIDNFDMLMDYCAKDVD 346
Query: 61 ATFEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVT 120
AT F++ LFP F ++ PHPV+
Sbjct: 347 AT--------------------------------------FKITAELFPRFRKKIPHPVS 368
Query: 121 LAGMLELSTAYLPVNNNWVKYF--NESCQTFNDLNVEMKSLLMDKCDQACSLLHDDK--- 175
A + L T LP W Y E C N V +L ++ + S + +
Sbjct: 369 FAALRHLGTLVLPTTKKWDSYVLTAEDCYLHNRQQVS--EILRERANSLVSFVEAKEPLP 426
Query: 176 -YKDSLWLWDQDWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRR 234
D WL DW++K+ + KK NGE
Sbjct: 427 DVSDDPWLRQLDWTLKEQRFKK-----------------------NGE------------ 451
Query: 235 ELVEKFKPLMQTKDRLPV-NSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTS 293
PV ++L GYPEWYR L +K++ ++
Sbjct: 452 ----------------PVAKQAFLTGYPEWYRDLFR----------NKEKEMN------- 478
Query: 294 EAWIPGPSLISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYST-DIKVPDAENIPLE 352
IS +ITP LL L W+ PL + GW + VP T ++K A+N L
Sbjct: 479 ---------ISVRTRITPLLLKLKWEGYPLLWTDSAGWCFKVPDETKEVKRMAAKNYTLA 529
Query: 353 QLKQLYNNITKQDNCEANVDNAQNSLRDSVETNISFIDCSKSAKRLEVIANVLDKKKLAE 412
+ ++++D+ SL D + N +
Sbjct: 530 K-------LSEEDH---------ESLLDELRDNGHY------------------------ 549
Query: 413 ASSTDTSTDDADTPREIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRII 472
K+PH +G + LS+ ++ F + L+ A+ I+
Sbjct: 550 -----------------QLFKIPHPEGPSKRCTSVLSKSYLRYFENGVLSSEYEYAQDIL 592
Query: 473 EISRMLSYWRNNHERVKKQFVVWLNKKDLPRRLVENIESEGRDY---GVILPQLIVSGTL 529
++ SYW N R+ QFVV+ + + + + + + R++ G+ILP+L GT+
Sbjct: 593 RLNSEASYWMGNRNRILDQFVVYSDTSG-SKNMFFDTKVKSREHPEMGIILPKLCSMGTI 651
Query: 530 TRRAVEATWMTASNAVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKE 589
TRRA E TW+TASN+ R+GSEL+AMI+AP GY+ +GADVDS+ELWIAS++GDS K
Sbjct: 652 TRRATENTWLTASNSKSNRIGSELKAMIEAPQGYAFVGADVDSEELWIASLVGDS-MFKI 710
Query: 590 HGATPLGWMTLSGQKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFN 649
HG T LGWMTL G K+ TD+HS TA+ +GI R AK+ NY RIYGAG +FA LLKQFN
Sbjct: 711 HGGTALGWMTLEGDKNEGTDLHSKTAEILGILRNDAKVFNYGRIYGAGVKFATTLLKQFN 770
Query: 650 PEMSKSDAKSKARKMYTLTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIF 709
E++ + A A+ +Y TKG+ T K
Sbjct: 771 SELTDAAALKVAQDLYARTKGQ-------------------------------TGKSKFL 799
Query: 710 DKPQWYGGTESAMFNRLEEIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQS 769
D+P ++GGTES MFN LE IA P TP L ++ AL + + + ++ +RINW +QS
Sbjct: 800 DRPMYHGGTESVMFNALEAIAYQDDPRTPVLGAAITDALSKKNLNKNNYMTSRINWAIQS 859
Query: 770 GAVDFLHLMLVCMRWLVSR---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAF 826
VD+LHL+L+ M +L++R D R ++++HDEIRY+V +++KY+ AL L V+NL TRA
Sbjct: 860 SGVDYLHLLLISMEYLIARYQVDARLILTVHDEIRYMVKEDQKYKLALLLQVSNLWTRAM 919
Query: 827 CIKKLDMTDIPLSISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQT 886
+++ + ++P S +FFS V+ID VLRKE DC TPS+P IP GE I Q
Sbjct: 920 FCEQMGLKEVPQSCAFFSEVDIDHVLRKEVTMDCVTPSHP------DSIPPGEKYTIRQL 973
Query: 887 IDKAN 891
++K +
Sbjct: 974 LEKCD 978
>gi|134081963|emb|CAK97229.1| unnamed protein product [Aspergillus niger]
Length = 1108
Score = 433 bits (1114), Expect = e-118, Method: Compositional matrix adjust.
Identities = 296/890 (33%), Positives = 421/890 (47%), Gaps = 215/890 (24%)
Query: 3 DESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLAT 62
+E W SS+NSL +V K +C+ +DK R+ F E I L+ YCA D T
Sbjct: 300 EELWVGRSSVNSLRDVAKFHCD-VTIDKAQRDYFGELDRNGILGKLEELLDYCAADVAIT 358
Query: 63 FEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLA 122
V + + FP FLE PHPV+
Sbjct: 359 HRVYKKV--------------------------------------FPNFLEVCPHPVSFG 380
Query: 123 GMLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDKYKDSLWL 182
+ LS+ LPVN W +Y + T++ +++ +++ C++A K KDS +
Sbjct: 381 ALRHLSSVILPVNETWKEYIANAEATYHQRLEDVQRKMIELCEEAL------KVKDSPDI 434
Query: 183 WDQDWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRRELVEKFKP 242
+ D ++ L + K + ++ + P R + KP
Sbjct: 435 YMNDPWLRQLDWSGQEVKMVKGKKKGDPP----------------------RPAARQKKP 472
Query: 243 LMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIPGPSL 302
G P+WY+ +L SD S
Sbjct: 473 ----------------GMPKWYK-----------------DLFATNTSDIS--------- 490
Query: 303 ISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTDIKVPDAENIPLEQLKQLYNNIT 362
+S +I P LL L+W PL + +GW + KVP ++L N
Sbjct: 491 LSVRTRIAPILLKLSWDGYPLTWSDKYGWTF--------KVP----------RELVKNYE 532
Query: 363 KQDNCEANVDNAQNSLRDSVETNISFIDCSKSAKRLEVIANVLDKKKLAEASSTDTSTDD 422
Q + C S ++ + N D+K +
Sbjct: 533 NQ----------------------PVVLCDMSEEKNPELQN--DRKHV------------ 556
Query: 423 ADTPREIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEISRMLSYWR 482
+ KLPHKDG NPL++ ++ F +L+ AK +E++ SYW
Sbjct: 557 --------YFKLPHKDGPQARCTNPLAKGYMQYFERGTLSSQYALAKEALEMNASCSYWI 608
Query: 483 NNHERVKKQFVVWLNKKDLPRRLVENIESEGRDYGVILPQLIVSGTLTRRAVEATWMTAS 542
+ +R+ Q VV+ +D R L + +++ R G ILPQ+I GT+TRRAVE TW+TAS
Sbjct: 609 SARDRIMGQMVVY---EDEVRGLTSSGKTDHR-LGFILPQIIPMGTITRRAVENTWLTAS 664
Query: 543 NAVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSG 602
NA G RVGSEL+AMI+AP GYS +GADVDSQELWIAS++GD+ + HG +G+MTL G
Sbjct: 665 NAKGNRVGSELKAMIKAPPGYSFVGADVDSQELWIASLVGDAQF-QIHGGNAIGFMTLEG 723
Query: 603 QKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKAR 662
K+ TDMHS TA+ +GISR AK+ NY RIYGAG +FA LL+QFNP MS+ + A
Sbjct: 724 SKAAGTDMHSRTAQILGISRNDAKVFNYGRIYGAGVKFAATLLRQFNPSMSERQTQEVAT 783
Query: 663 KMYTLTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQWYGGTESAM 722
K+Y TKG + R R +C + P W GGTES +
Sbjct: 784 KLYKETKGTRTTR-------------------RILC-----------EGPFWRGGTESFV 813
Query: 723 FNRLEEIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLVCM 782
FN+LEE A +P TP L ++ AL + F+ +RINW +QS VD+LHL++V M
Sbjct: 814 FNKLEEFAEQERPRTPTLGAGITEALMRRFINKGSFMTSRINWAIQSSGVDYLHLLIVAM 873
Query: 783 RWLVSR---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIPLS 839
+L+ R R I++HDEIRYLV DE+KY ALAL V N+ TRA +++ + D+P S
Sbjct: 874 DYLIRRFNIAARLAITVHDEIRYLVKDEDKYRAALALQVANVWTRAMFSQQVGINDLPQS 933
Query: 840 ISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDK 889
++FS V+ID VLRKE D DC TPS+P + IP GE LD+ Q +DK
Sbjct: 934 CAYFSAVDIDHVLRKEVDMDCVTPSHP------HKIPHGESLDVAQLLDK 977
>gi|317034839|ref|XP_001401279.2| DNA polymerase gamma [Aspergillus niger CBS 513.88]
gi|350639674|gb|EHA28028.1| hypothetical protein ASPNIDRAFT_185612 [Aspergillus niger ATCC 1015]
Length = 1135
Score = 433 bits (1113), Expect = e-118, Method: Compositional matrix adjust.
Identities = 296/890 (33%), Positives = 421/890 (47%), Gaps = 215/890 (24%)
Query: 3 DESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLAT 62
+E W SS+NSL +V K +C+ +DK R+ F E I L+ YCA D T
Sbjct: 327 EELWVGRSSVNSLRDVAKFHCD-VTIDKAQRDYFGELDRNGILGKLEELLDYCAADVAIT 385
Query: 63 FEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLA 122
V + + FP FLE PHPV+
Sbjct: 386 HRVYKKV--------------------------------------FPNFLEVCPHPVSFG 407
Query: 123 GMLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDKYKDSLWL 182
+ LS+ LPVN W +Y + T++ +++ +++ C++A K KDS +
Sbjct: 408 ALRHLSSVILPVNETWKEYIANAEATYHQRLEDVQRKMIELCEEAL------KVKDSPDI 461
Query: 183 WDQDWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRRELVEKFKP 242
+ D ++ L + K + ++ + P R + KP
Sbjct: 462 YMNDPWLRQLDWSGQEVKMVKGKKKGDPP----------------------RPAARQKKP 499
Query: 243 LMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIPGPSL 302
G P+WY+ +L SD S
Sbjct: 500 ----------------GMPKWYK-----------------DLFATNTSDIS--------- 517
Query: 303 ISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTDIKVPDAENIPLEQLKQLYNNIT 362
+S +I P LL L+W PL + +GW + KVP ++L N
Sbjct: 518 LSVRTRIAPILLKLSWDGYPLTWSDKYGWTF--------KVP----------RELVKNYE 559
Query: 363 KQDNCEANVDNAQNSLRDSVETNISFIDCSKSAKRLEVIANVLDKKKLAEASSTDTSTDD 422
Q + C S ++ + N D+K +
Sbjct: 560 NQ----------------------PVVLCDMSEEKNPELQN--DRKHV------------ 583
Query: 423 ADTPREIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEISRMLSYWR 482
+ KLPHKDG NPL++ ++ F +L+ AK +E++ SYW
Sbjct: 584 --------YFKLPHKDGPQARCTNPLAKGYMQYFERGTLSSQYALAKEALEMNASCSYWI 635
Query: 483 NNHERVKKQFVVWLNKKDLPRRLVENIESEGRDYGVILPQLIVSGTLTRRAVEATWMTAS 542
+ +R+ Q VV+ +D R L + +++ R G ILPQ+I GT+TRRAVE TW+TAS
Sbjct: 636 SARDRIMGQMVVY---EDEVRGLTSSGKTDHR-LGFILPQIIPMGTITRRAVENTWLTAS 691
Query: 543 NAVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSG 602
NA G RVGSEL+AMI+AP GYS +GADVDSQELWIAS++GD+ + HG +G+MTL G
Sbjct: 692 NAKGNRVGSELKAMIKAPPGYSFVGADVDSQELWIASLVGDAQF-QIHGGNAIGFMTLEG 750
Query: 603 QKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKAR 662
K+ TDMHS TA+ +GISR AK+ NY RIYGAG +FA LL+QFNP MS+ + A
Sbjct: 751 SKAAGTDMHSRTAQILGISRNDAKVFNYGRIYGAGVKFAATLLRQFNPSMSERQTQEVAT 810
Query: 663 KMYTLTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQWYGGTESAM 722
K+Y TKG + R R +C + P W GGTES +
Sbjct: 811 KLYKETKGTRTTR-------------------RILC-----------EGPFWRGGTESFV 840
Query: 723 FNRLEEIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLVCM 782
FN+LEE A +P TP L ++ AL + F+ +RINW +QS VD+LHL++V M
Sbjct: 841 FNKLEEFAEQERPRTPTLGAGITEALMRRFINKGSFMTSRINWAIQSSGVDYLHLLIVAM 900
Query: 783 RWLVSR---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIPLS 839
+L+ R R I++HDEIRYLV DE+KY ALAL V N+ TRA +++ + D+P S
Sbjct: 901 DYLIRRFNIAARLAITVHDEIRYLVKDEDKYRAALALQVANVWTRAMFSQQVGINDLPQS 960
Query: 840 ISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDK 889
++FS V+ID VLRKE D DC TPS+P + IP GE LD+ Q +DK
Sbjct: 961 CAYFSAVDIDHVLRKEVDMDCVTPSHP------HKIPHGESLDVAQLLDK 1004
>gi|50556422|ref|XP_505619.1| YALI0F19404p [Yarrowia lipolytica]
gi|49651489|emb|CAG78428.1| YALI0F19404p [Yarrowia lipolytica CLIB122]
Length = 1046
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 288/889 (32%), Positives = 417/889 (46%), Gaps = 230/889 (25%)
Query: 2 TDESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLA 61
+++ W VS+ NSL+EV L+ G V+ K DR +F + SL +++ + Y
Sbjct: 312 SEDPWVMVSATNSLAEVAHLHLNGLVMSKDDRELFSQESLGELQQRVKQAIDYN------ 365
Query: 62 TFEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTL 121
+ D T +V + + PLFL+ PHPV+
Sbjct: 366 --------------------------------ITDVEITAQVFKKILPLFLDTCPHPVSF 393
Query: 122 AGMLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHD---DKYKD 178
+ +S+A LP ++ W Y N + + + L +A L + + + +
Sbjct: 394 TALKNISSAILPTDSEWKDYLNRCENMYQKMKKSIDEGLQSLVTEAVKLKDEADKEPWLN 453
Query: 179 SLWLWDQDWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRRELVE 238
WL DW++K +K+ K K GE
Sbjct: 454 DPWLSQLDWTIKPIKMVKIPAK-----------------QGGGE---------------- 480
Query: 239 KFKPLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIP 298
RLP N + GYPEWY+ L S A
Sbjct: 481 ----------RLPKNVKF-PGYPEWYKALF-----------------------KSSA--- 503
Query: 299 GPSLISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTDIKVPDAENIPLEQLKQLY 358
GP I+T +ITP LL L W+ P+ + GW + +VP
Sbjct: 504 GPMHITTKTRITPLLLRLKWEGYPVVWSDKEGWMF--------RVP-------------- 541
Query: 359 NNITKQDNCEANVDNAQNSLRDSVETNISFIDCSKSAKRLEVIANVLDKKKLAEASSTDT 418
+++Q + EA K KLA +
Sbjct: 542 --VSEQAHFEAK------------------------------------KYKLATLDTEPH 563
Query: 419 STDDADTPREIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEISRML 478
DD T + F ++PHKDG + + + F+ F +L+ + K + E+S
Sbjct: 564 LRDDGST---LCF-RIPHKDGGNTRTTQLMGKSFLGHFEKGTLSSDNPQTKEMFEMSVCS 619
Query: 479 SYWRNNHERVKKQFVVW-LNKKDLPRRLVENIESEGRDYGVILPQLIVSGTLTRRAVEAT 537
SYW +N R+ Q +W + D+ R G +G+I+P++I GT+TRR VE T
Sbjct: 620 SYWVSNRSRIMSQHCIWDGDGVDMGR---------GPGFGIIIPRIIPMGTITRRCVENT 670
Query: 538 WMTASNAVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGW 597
W+TASNA R+GSEL++MI+AP GYS +GADVDS+ELWIAS+ GDS C K HG+T +GW
Sbjct: 671 WLTASNAKKNRIGSELKSMIKAPPGYSFVGADVDSEELWIASLYGDS-CFKNHGSTAIGW 729
Query: 598 MTLSGQKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDA 657
MTL G KS TD+HS TA +GISR AKI NY RIYGAG +FAE LLKQF+P ++ ++A
Sbjct: 730 MTLEGTKSEGTDLHSKTASILGISRNEAKIFNYGRIYGAGLKFAEALLKQFSPNVTDAEA 789
Query: 658 KSKARKMYTLTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQWYGG 717
+ A ++YT TKGKK+Y + KY GG
Sbjct: 790 STLAGQLYTSTKGKKIYSI-------------GKYS----------------------GG 814
Query: 718 TESAMFNRLEEIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHL 777
TES +FN+LEEIAT P TP L +++AL + S F+ +R+NW +QS VD+LH+
Sbjct: 815 TESILFNKLEEIATQDMPETPVLGAVITKALSSQNLKKSSFMTSRVNWTIQSSGVDYLHM 874
Query: 778 MLVCMRWLVSR---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMT 834
++V M +L ++ D R I++HDE+R+LV +E+ Y A+AL V+N+ TR ++ +
Sbjct: 875 LVVSMEYLAAKYDIDMRLCITVHDELRFLVKNEDAYRAAMALQVSNIWTRGMFCQQSGID 934
Query: 835 DIPLSISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDI 883
DIP +FFS V+ID VLRKE D DC TP++P IP GE LDI
Sbjct: 935 DIPQGCAFFSAVDIDHVLRKEVDFDCITPTHP------DPIPHGESLDI 977
>gi|171686350|ref|XP_001908116.1| hypothetical protein [Podospora anserina S mat+]
gi|161087386|gb|ABX56854.1| mitochondrial DNA polymerase gamma catalytic subunit [Podospora
anserina]
gi|170943136|emb|CAP68789.1| unnamed protein product [Podospora anserina S mat+]
Length = 1155
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 288/893 (32%), Positives = 411/893 (46%), Gaps = 215/893 (24%)
Query: 3 DESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLAT 62
+E W SS+NSL +V + + G +DK RN F E + I L+TYCA D T
Sbjct: 322 EELWVERSSINSLRDVAQFHL-GVTIDKEARNAFGEFDRDGINQQLDELLTYCAADVAIT 380
Query: 63 FEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLA 122
V Q +FP FL PHPV+ A
Sbjct: 381 HRVY--------------------------------------QVVFPNFLRVCPHPVSFA 402
Query: 123 GMLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLL-HDDKYKDSLW 181
+ LS LPVN W Y + T+ L+ ++ L+ D+A + +K+ W
Sbjct: 403 ALRHLSNVILPVNKTWDSYIANAEATYRKLSDGVRERLVALTDKAREIKKQPEKWSTDPW 462
Query: 182 LWDQDWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRRELVEKFK 241
+ DWS +++K+ K T P E+ KN
Sbjct: 463 MSQLDWSGQEVKMTKGT--------PTSPPREY----KN--------------------- 489
Query: 242 PLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIPGPS 301
++P G P WYR L K GP
Sbjct: 490 ------QKMP-------GEPNWYRNLFPKAK--------------------------GPI 510
Query: 302 LISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTDIKVPDAENIPLEQLKQLYNNI 361
++ +I P LL L+W PL + HGW + +PL +K+ +
Sbjct: 511 NLTVRTRIAPLLLRLSWDGHPLFWSDKHGWTF--------------RVPLADMKKYLDKQ 556
Query: 362 TKQDNCEANVDNAQNSLRDSVETNISFIDCSKSAKRLEVIANVLDKKKLAEASSTDTSTD 421
K + E ET ++ + +K A
Sbjct: 557 MKPCDFEG-------------ETVLAVKEDTKHA-------------------------- 577
Query: 422 DADTPREIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEISRMLSYW 481
+ KLPHKDG NP+++ +++ F +L+ AK +E++ SYW
Sbjct: 578 ---------YFKLPHKDGPTARCTNPMAKSYLSYFEKGTLSSEYDYAKEALEMNASCSYW 628
Query: 482 RNNHERVKKQFVVWLNKKDLPRRLVENIESEGRDYGVILPQLIVSGTLTRRAVEATWMTA 541
++ +R+ Q VV+ + P R +++ + G ILPQ+I GT+TRRAVE TW+TA
Sbjct: 629 ISSRDRIMSQLVVYESNLPEPVR-PKDLPEDAPTPGFILPQVIPMGTVTRRAVENTWLTA 687
Query: 542 SNAVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLS 601
SNA RVGSEL+AM++AP GY +GADVDS+ELWIASV+GD+ K HG +G+MTL
Sbjct: 688 SNAKKNRVGSELKAMVRAPPGYVFVGADVDSEELWIASVVGDA-TFKLHGGNAIGFMTLE 746
Query: 602 GQKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKA 661
G K+ TD+HS TA +GI+R AK+ NY RIYGAG +FA +LL+QFNP +S+ + A
Sbjct: 747 GTKAQGTDLHSRTAAILGITRNDAKVFNYGRIYGAGLKFAGQLLRQFNPSLSEQETLDIA 806
Query: 662 RKMYTLTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQWYGGTESA 721
K+Y TKG K T+ ++ +P W GGTES
Sbjct: 807 GKLYATTKGTK------------------------------TNRKSLYKRPFWRGGTESF 836
Query: 722 MFNRLEEIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLVC 781
+FN+LEE A P TP L ++ AL ++ +RINW +QS VD+LHL++V
Sbjct: 837 VFNKLEEFAEQSHPRTPVLGAGITEALTARFLSKGGYLTSRINWAIQSSGVDYLHLLIVS 896
Query: 782 MRWLVSR---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIPL 838
M +L R R I++HDEIRYLV + +KY A+AL ++NL TRA +++ + D+P
Sbjct: 897 MDYLTRRFNIACRLAITVHDEIRYLVQEHDKYRAAMALQISNLWTRAMFAQQVGIHDLPQ 956
Query: 839 SISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKAN 891
S +FFS V+ID VLRKE D C TPSNP IP GE +DI Q + K +
Sbjct: 957 SCAFFSAVDIDTVLRKEVDMPCITPSNP------IPIPPGETVDINQLLSKGS 1003
>gi|448102935|ref|XP_004199912.1| Piso0_002465 [Millerozyma farinosa CBS 7064]
gi|359381334|emb|CCE81793.1| Piso0_002465 [Millerozyma farinosa CBS 7064]
Length = 1269
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 288/905 (31%), Positives = 424/905 (46%), Gaps = 216/905 (23%)
Query: 1 MTDESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTL 60
+ D+ W + S NSL+ V +C K +DKTDR+ F DI +N++NLM YCAKD
Sbjct: 314 LIDDPWLSKGSPNSLANVADFHCNIK-MDKTDRDFFSSMDPLDIISNFNNLMDYCAKDVE 372
Query: 61 ATFEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVT 120
AT YL V LF F ++ PHPV+
Sbjct: 373 AT------------------------------YL--------VSAKLFSEFRQKIPHPVS 394
Query: 121 LAGMLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDKYKDSL 180
A + L T LP WV Y + + + E+ +L + + C + + +K +SL
Sbjct: 395 FAALRHLGTLMLPTTKKWVSYIENAEKIYQKNRDEVGQILKGRAN--CYVEYIEKQDESL 452
Query: 181 --------WLWDQDWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKR 232
WL DWS K ++KK +
Sbjct: 453 KPDYENDPWLSQLDWSYKQPRIKKDGTPS------------------------------- 481
Query: 233 RRELVEKFKPLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDT 292
N ++L GYPEWYR L H D+ +++ I +
Sbjct: 482 -------------------ANQAFLTGYPEWYRDL----HKLTVDSKGEKQRIIN----- 513
Query: 293 SEAWIPGPSLISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTDIKVPDAENIPLE 352
++T +ITP LL L W+ PL + GW + VP+ +NI +E
Sbjct: 514 ----------VTTRTRITPLLLKLKWEGYPLFWTDSAGWCFKVPFK--------DNIIIE 555
Query: 353 QLKQLYNNITKQDNCEANVDNAQNSLRDSVETNISFIDCSKSAKRLEVIANVLDKKKLAE 412
+ Y RL +++V D +K +
Sbjct: 556 LQAKNY--------------------------------------RLAKLSDV-DHEKYFD 576
Query: 413 ASSTDTSTDDADTPREIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRII 472
+ DT K+PH +G + L++ +++ F L A I+
Sbjct: 577 SLQKDT--------ERFVLFKVPHPEGPSKRCTSVLAKSYLSFFEKGILTSEFDYASEIL 628
Query: 473 EISRMLSYWRNNHERVKKQFVVWLNKKDLPRRLVENI--ESEGRDYGVILPQLIVSGTLT 530
+++ SYW N +R+ QFVV + + + E D G+ILP+L GT+T
Sbjct: 629 KLNSTASYWMGNRQRIFDQFVVHSDPSAKKNKFFKTRPERKEHEDMGIILPKLCAMGTIT 688
Query: 531 RRAVEATWMTASNAVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEH 590
RRA E TW+TASN+ R+GSEL+AMI+AP+GY +GADVDS+ELWIA++IGDS H
Sbjct: 689 RRATENTWLTASNSKPNRIGSELKAMIEAPEGYVFVGADVDSEELWIAALIGDSIMGI-H 747
Query: 591 GATPLGWMTLSGQKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNP 650
G T LGWMTL G K+ TD+HS TA+ +GISR AK+ NY RIYGAG +FA +LLKQ NP
Sbjct: 748 GGTALGWMTLEGDKNEKTDLHSKTAEILGISRNEAKVFNYGRIYGAGVKFATQLLKQCNP 807
Query: 651 EMSKSDAKSKARKMYTLTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFD 710
+S A+ A ++Y TKG+ S K
Sbjct: 808 SLSDEQAEEMATELYKRTKGR-------------------------------VSASKALG 836
Query: 711 KPQWYGGTESAMFNRLEEIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSG 770
++GG+ES +FN LE IA P TP L ++ AL + + + ++ +RINWV+QS
Sbjct: 837 SRMYHGGSESIIFNTLESIAYGEDPKTPVLGASITDALTAKNLNKNAYLTSRINWVIQSS 896
Query: 771 AVDFLHLMLVCMRWLVSR---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFC 827
VD+LHL+++ M +L+ + D R +I++HDE+RYLV +++KY+ A L ++N TRA
Sbjct: 897 GVDYLHLLIISMEYLIRKYKVDARLLITVHDELRYLVKEKDKYKVAYLLQISNAWTRAMF 956
Query: 828 IKKLDMTDIPLSISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTI 887
+KL + ++P S +FFS V+ID VLRKE + +C TPS+P IP GE LDI+ +
Sbjct: 957 CEKLGIKELPQSCAFFSEVDIDFVLRKEVNQECITPSHP------EKIPPGESLDIHAIL 1010
Query: 888 DKANG 892
+K +G
Sbjct: 1011 EKCDG 1015
>gi|346319699|gb|EGX89300.1| DNA polymerase gamma [Cordyceps militaris CM01]
Length = 1132
Score = 431 bits (1108), Expect = e-117, Method: Compositional matrix adjust.
Identities = 290/895 (32%), Positives = 423/895 (47%), Gaps = 217/895 (24%)
Query: 3 DESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLAT 62
+E W SS+NSL +V K + + +DK R+ F E + +I L+ YCA D T
Sbjct: 322 EELWVERSSVNSLRDVAKFHLDVN-MDKAIRDDFGELNKSEILAKLDPLLDYCAADVAIT 380
Query: 63 FEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLA 122
V + + FP FL+ PHPV+ A
Sbjct: 381 HRVYKIV--------------------------------------FPNFLDTCPHPVSFA 402
Query: 123 GMLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHD-DKYKDSLW 181
+ LS+ LPVNN+W Y + T+++L+ ++ L+ D+A + +D +K+++ W
Sbjct: 403 ALRHLSSVILPVNNSWDAYIANTEATYHELSDAVQERLVALTDKALEIKNDPEKWQNDPW 462
Query: 182 LWDQDWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRRELVEKFK 241
+ DWS +++++ K K++ +L
Sbjct: 463 MKQLDWSGQEIRMVKG---------------------------------KKKGDL----- 484
Query: 242 PLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIPGPS 301
P + + P G P+WY KD SK + P
Sbjct: 485 PRPAARQKKP-------GCPQWY-----------KDLFSKND---------------API 511
Query: 302 LISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTDIKVPDAENIPLEQLKQLYNNI 361
I+ +I P LL + W PL + +GW +
Sbjct: 512 SITVRTRIAPLLLRMAWDGNPLVWSDKYGWTF---------------------------- 543
Query: 362 TKQDNCEANVDNAQNSLRDSVETNISFIDCSKSAKRLEVIANVLDKKKLAEASSTDTSTD 421
+ D C NAQ + + I C E A + D K+ A
Sbjct: 544 -ETDRC-----NAQKYI------DKQMIQCQFE----EADATLRDDKRHA---------- 577
Query: 422 DADTPREIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEISRMLSYW 481
+ KLPHKDG NP+++ ++ F + +L+ AK +E++ SYW
Sbjct: 578 ---------YFKLPHKDGPTARCANPMAKGYLPYFENGTLSSEYSYAKEALEMNASCSYW 628
Query: 482 RNNHERVKKQFVVWLNKKDLPRRLVENIESEGRDYGVILPQLIVSGTLTRRAVEATWMTA 541
+ +R+ Q VV K+DLP ++ ES G ILPQ+I GT+TRRAVE TW+TA
Sbjct: 629 ISARDRIMSQMVV--RKQDLPN-ADKSAESAANGLGFILPQIIPMGTITRRAVENTWLTA 685
Query: 542 SNAVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLS 601
SNA RVGSEL+AM++AP GYS +GADVDS+ELWIAS+IGD+ + HG +G+MTL
Sbjct: 686 SNAKKNRVGSELKAMVRAPAGYSFVGADVDSEELWIASLIGDA-TFQLHGGNAVGFMTLE 744
Query: 602 GQKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKA 661
G KS TD+HS TA +GI+R AK+ NY RIYGAG +FA LL+QFNP +S+ A
Sbjct: 745 GTKSAGTDLHSRTASILGITRNDAKVFNYGRIYGAGLKFAATLLRQFNPALSERQTMETA 804
Query: 662 RKMYTLTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQWYGGTESA 721
K+Y TKG K T+ ++ +P W GGTES
Sbjct: 805 SKLYASTKGTK------------------------------TNRKTLYKRPFWRGGTESF 834
Query: 722 MFNRLEEIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLVC 781
+FN+LEE A +P TP L ++ AL ++ +RINW +QS VD+LHL++V
Sbjct: 835 VFNKLEEFAEQERPRTPVLGAGITEALMGRFISKGGYLTSRINWAIQSSGVDYLHLLIVA 894
Query: 782 MRWLVSR---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIPL 838
M +LV R D R I++HDEIRYLV DE++Y A+AL V N+ TRA +++ + D+P
Sbjct: 895 MDYLVRRFAIDARLAITVHDEIRYLVKDEDRYRAAMALQVANVWTRAIFAQQVGIHDLPQ 954
Query: 839 SISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKANGV 893
S ++FS +++D VLRKE D +C TPS+P IP GE LDI + K +
Sbjct: 955 SCAYFSAIDVDHVLRKEVDMECVTPSHP------TAIPPGESLDIATLLAKGDAA 1003
>gi|470326|gb|AAA17543.1| mitochondrial DNA polymerase [Saccharomyces cerevisiae]
Length = 1254
Score = 431 bits (1107), Expect = e-117, Method: Compositional matrix adjust.
Identities = 293/905 (32%), Positives = 422/905 (46%), Gaps = 226/905 (24%)
Query: 3 DESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLAT 62
D+ W NVS+LNSL +V K +C+ LDKTDR+ F I N+ L+ YCA D AT
Sbjct: 293 DDPWLNVSALNSLKDVAKFHCKID-LDKTDRDFFASTDKSTIIENFQKLVNYCATDVTAT 351
Query: 63 FEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLA 122
+ V +FP+FL++ PHPV+ A
Sbjct: 352 SQ--------------------------------------VFDKIFPVFLKKCPHPVSFA 373
Query: 123 GMLELSTAYLPVN-NNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHD--DKYKDS 179
G+ LS LP N+W Y N S + V+++S ++ + + LL D D Y
Sbjct: 374 GLKSLSKCILPTKLNDWNDYLNSSESLYQQSKVQIESKIV-QIIKDIVLLKDKPDFYLKD 432
Query: 180 LWLWDQDWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRRELVEK 239
WL DW+
Sbjct: 433 PWLSQLDWTT-------------------------------------------------- 442
Query: 240 FKPLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIPG 299
KPL TK +P L G+PEWYR+L KD V +
Sbjct: 443 -KPLRLTKKGVPAKCQKLPGFPEWYRQLF-----PSKDTVEPK----------------- 479
Query: 300 PSLISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTDIKVPDAENIPLEQLKQLYN 359
I+ +I P L L+W++ P+ + + GW + N+P EQ++
Sbjct: 480 ---ITIKSRIIPILFKLSWENSPVIWSKESGWCF--------------NVPHEQVETY-- 520
Query: 360 NITKQDNCEANVDNAQN-SLRDSVETNISFIDCSKSAKRLEVIANVLDKKKLAEASSTDT 418
A+N L DSV S + E+ N L +
Sbjct: 521 -------------KAKNYVLADSV-----------SQEEEEIRMNNLGLQCTGV------ 550
Query: 419 STDDADTPREIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEISRML 478
K+PH +G N N L++ + + F L A + ++I+
Sbjct: 551 ------------LFKVPHPNGPTFNCTNLLTKSYNHFFEKGVLKSESELAHQALQINSSG 598
Query: 479 SYWRNNHERVKKQFVVWLNK-----KDLPRRLVENIESEGRDYGVILPQLIVSGTLTRRA 533
SYW + ER++ QFVV K + L + N E + D +I+P+++ GT+TRRA
Sbjct: 599 SYWMSARERIQSQFVVPNCKFPNEFQSLSAKSSLNNE-KTNDLAIIIPKIVPMGTITRRA 657
Query: 534 VEATWMTASNAVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGAT 593
VE TW+TASNA R+GSEL+ ++AP GY +GADVDS+ELWIAS++GDS HG T
Sbjct: 658 VENTWLTASNAKANRIGSELKTQVKAPPGYCFVGADVDSEELWIASLVGDS-IFNVHGGT 716
Query: 594 PLGWMTLSGQKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMS 653
+GWM L G K+ TD+H+ TA+ +G SR AKI NY RIYGAG +FA +LLK+FNP ++
Sbjct: 717 AIGWMCLEGTKNEGTDLHTKTAQILGCSRNEAKIFNYGRIYGAGAKFASQLLKRFNPSLT 776
Query: 654 KSDAKSKARKMYTLTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQ 713
+ K A K+Y TKGK T K+F K
Sbjct: 777 DEETKKIANKLYENTKGK-------------------------------TKRSKLFKK-F 804
Query: 714 WYGGTESAMFNRLEEIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVD 773
WYGG+ES +FN+LE IA P TP L C ++ +L + + F+ +RINW +QS VD
Sbjct: 805 WYGGSESILFNKLESIAEQETPKTPVLGCGITYSLMKKNLRANSFLPSRINWAIQSSGVD 864
Query: 774 FLHLMLVCMRWLVSR---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKK 830
+LHL+ M +++ + + R ISIHDEIR+LV +++KY A+AL ++N+ TRA ++
Sbjct: 865 YLHLLCCSMEYIIKKYNLEARLCISIHDEIRFLVSEKDKYRAAMALQISNIWTRAMFCQQ 924
Query: 831 LDMTDIPLSISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKA 890
+ + ++P + +FFS V+ID V+RKE + DC TPSN IP GE LDI Q +DK
Sbjct: 925 MGINELPQNCAFFSQVDIDSVIRKEVNMDCITPSN------KTAIPHGEALDINQLLDKP 978
Query: 891 NGVIG 895
N +G
Sbjct: 979 NSKLG 983
>gi|349581479|dbj|GAA26637.1| K7_Mip1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 1254
Score = 430 bits (1106), Expect = e-117, Method: Compositional matrix adjust.
Identities = 292/905 (32%), Positives = 422/905 (46%), Gaps = 226/905 (24%)
Query: 3 DESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLAT 62
D+ W NVS+LNSL +V K +C+ LDKTDR+ F I N+ L+ YCA D AT
Sbjct: 293 DDPWLNVSALNSLKDVAKFHCKID-LDKTDRDFFASTDKSTIIENFQKLVNYCATDVTAT 351
Query: 63 FEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLA 122
+ V +FP+FL++ PHPV+ A
Sbjct: 352 SQ--------------------------------------VFDKIFPVFLKKCPHPVSFA 373
Query: 123 GMLELSTAYLPVN-NNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHD--DKYKDS 179
G+ LS LP N+W Y N S + V+++S ++ + + LL D D Y
Sbjct: 374 GLKSLSKCILPTKLNDWNDYLNSSESLYQQSKVQIESKIV-QIIKDIVLLKDKPDFYLKD 432
Query: 180 LWLWDQDWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRRELVEK 239
WL DW+
Sbjct: 433 PWLSQLDWTT-------------------------------------------------- 442
Query: 240 FKPLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIPG 299
KPL TK +P L G+PEWYR+L KD V +
Sbjct: 443 -KPLRLTKKGVPAKCQKLPGFPEWYRQLF-----PSKDTVEPK----------------- 479
Query: 300 PSLISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTDIKVPDAENIPLEQLKQLYN 359
I+ +I P L L+W++ P+ + + GW + N+P EQ++
Sbjct: 480 ---ITIKSRIIPILFKLSWENSPVIWSKESGWCF--------------NVPHEQVETY-- 520
Query: 360 NITKQDNCEANVDNAQN-SLRDSVETNISFIDCSKSAKRLEVIANVLDKKKLAEASSTDT 418
A+N L DSV S + E+ N L +
Sbjct: 521 -------------KAKNYVLADSV-----------SQEEEEIRMNNLGLQCTGV------ 550
Query: 419 STDDADTPREIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEISRML 478
K+PH +G N N L++ + + F L A + ++I+
Sbjct: 551 ------------LFKVPHPNGPTFNCTNLLTKSYNHFFEKGVLKSESELAHQALQINSSG 598
Query: 479 SYWRNNHERVKKQFVVWLNK-----KDLPRRLVENIESEGRDYGVILPQLIVSGTLTRRA 533
SYW + ER++ QFV+ K + L + N E + D +I+P+++ GT+TRRA
Sbjct: 599 SYWMSARERIQSQFVIPNCKFPNEFQSLSAKSSLNNE-KTNDLAIIIPKIVPMGTITRRA 657
Query: 534 VEATWMTASNAVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGAT 593
VE TW+TASNA R+GSEL+ ++AP GY +GADVDS+ELWIAS++GDS HG T
Sbjct: 658 VENTWLTASNAKANRIGSELKTQVKAPPGYCFVGADVDSEELWIASLVGDS-IFNVHGGT 716
Query: 594 PLGWMTLSGQKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMS 653
+GWM L G K+ TD+H+ TA+ +G SR AKI NY RIYGAG +FA +LLK+FNP ++
Sbjct: 717 AIGWMCLEGTKNEGTDLHTKTAQILGCSRNEAKIFNYGRIYGAGAKFASQLLKRFNPSLT 776
Query: 654 KSDAKSKARKMYTLTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQ 713
+ K A K+Y TKGK T K+F K
Sbjct: 777 DEETKKIANKLYENTKGK-------------------------------TKRSKLFKK-F 804
Query: 714 WYGGTESAMFNRLEEIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVD 773
WYGG+ES +FN+LE IA P TP L C ++ +L + + F+ +RINW +QS VD
Sbjct: 805 WYGGSESILFNKLESIAEQETPKTPVLGCGITYSLMKKNLRANSFLPSRINWAIQSSGVD 864
Query: 774 FLHLMLVCMRWLVSR---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKK 830
+LHL+ M +++ + + R ISIHDEIR+LV +++KY A+AL ++N+ TRA ++
Sbjct: 865 YLHLLCCSMEYIIKKYNLEARLCISIHDEIRFLVSEKDKYRAAMALQISNIWTRAMFCQQ 924
Query: 831 LDMTDIPLSISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKA 890
+ + ++P + +FFS V+ID V+RKE + DC TPSN IP GE LDI Q +DK
Sbjct: 925 MGINELPQNCAFFSQVDIDSVIRKEVNMDCITPSN------KTAIPHGEALDINQLLDKP 978
Query: 891 NGVIG 895
N +G
Sbjct: 979 NSKLG 983
>gi|407927648|gb|EKG20535.1| hypothetical protein MPH_02062 [Macrophomina phaseolina MS6]
Length = 1101
Score = 430 bits (1105), Expect = e-117, Method: Compositional matrix adjust.
Identities = 290/893 (32%), Positives = 416/893 (46%), Gaps = 214/893 (23%)
Query: 3 DESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLAT 62
+E W SS+NSL +V K +C +DK R F E + L+ YCA D T
Sbjct: 274 EELWIGRSSVNSLRDVAKFHC-NITIDKAQREYFGELDRAGVREKLDELLDYCAADVHIT 332
Query: 63 FEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLA 122
V Q + FPLF + PHPV+ A
Sbjct: 333 HRVYQKV--------------------------------------FPLFHDLCPHPVSFA 354
Query: 123 GMLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHD-DKYKDSLW 181
+ + T LP+N +W Y + + T+ L+ E++ L+D D+A + D D Y++ W
Sbjct: 355 ALRFMGTEILPINQSWNDYIHNAEATYQRLSEEVQQRLVDLADKALEVKGDPDHYQNDPW 414
Query: 182 LWDQDWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRRELVEKFK 241
L DWS +++K+ K K +P R + K
Sbjct: 415 LSQLDWSGQEIKMVKGKKKG--------DPP---------------------RPAARQKK 445
Query: 242 PLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIPGPS 301
P G P+WYR L P S D P
Sbjct: 446 P----------------GMPKWYRDLF--PKSTD------------------------PI 463
Query: 302 LISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTDIKVPDAENIPLEQLKQLYNNI 361
++T +I P LL L+W PL + GW Y +VP + +++K ++
Sbjct: 464 NLTTRTRIAPLLLRLSWDGHPLFWTDKFGWTY--------RVPVKDTKLSDEMKAALCDM 515
Query: 362 TKQDNCEANVDNAQNSLRDSVETNISFIDCSKSAKRLEVIANVLDKKKLAEASSTDTSTD 421
++++N A RL+
Sbjct: 516 SEEENV---------------------------ALRLD---------------------- 526
Query: 422 DADTPREIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEISRMLSYW 481
R+ + K+PHKDG NPL++ + F + L AK +E++ SYW
Sbjct: 527 -----RDHHYFKIPHKDGPTARCTNPLAKSYQQFFENGRLTSQYSYAKEALEMNASCSYW 581
Query: 482 RNNHERVKKQFVVWLNKKDLPRRLVENIESEGRDYGVILPQLIVSGTLTRRAVEATWMTA 541
+ +R++ Q V + + R N + + G ILPQ+I GT+TRRAVE TW+TA
Sbjct: 582 ISARDRIRSQMAV-FDGDAMVRNKPMNGGTSDPNVGYILPQVIPMGTITRRAVENTWLTA 640
Query: 542 SNAVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLS 601
SNA RVGSEL++M++AP GY +GADVDS+ELWIAS+IGD+ K HG +G+MTL
Sbjct: 641 SNAKKNRVGSELKSMVKAPPGYCFVGADVDSEELWIASLIGDAQF-KLHGGNAIGFMTLE 699
Query: 602 GQKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKA 661
G K+ TD+HS TA +GISR AK+ NY RIYGAG +FA LL+QFNP ++++ + A
Sbjct: 700 GTKAAGTDLHSRTANILGISRNDAKVFNYGRIYGAGLKFASTLLRQFNPSLTEAQTTATA 759
Query: 662 RKMYTLTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQWYGGTESA 721
K+Y TKGKK R + L +R + W GGTES
Sbjct: 760 SKLYQETKGKKTLR------KTLQERSF------------------------WRGGTESF 789
Query: 722 MFNRLEEIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLVC 781
+FN+LE+ A +P TP L ++ AL FI +RINW +QS VD+LHL++V
Sbjct: 790 VFNKLEDFAEQEKPRTPVLGAGITEALTKRYLTKGSFITSRINWAIQSSGVDYLHLLIVS 849
Query: 782 MRWLVSR---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIPL 838
M +L R R +++HDEIRYLV +E+KY ALAL V+N+ TRA +++ + D+P
Sbjct: 850 MDYLTRRFNIQARLALTVHDEIRYLVKEEDKYRAALALQVSNVWTRAMFSQQVGIDDLPQ 909
Query: 839 SISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKAN 891
S +FFS V+ID VLRKE D +C TPS+P IP GE LDI ++K +
Sbjct: 910 SCAFFSAVDIDHVLRKEVDMECITPSHP------TPIPPGESLDILTLLEKGD 956
>gi|325091155|gb|EGC44465.1| DNA polymerase gamma [Ajellomyces capsulatus H88]
Length = 1146
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 295/896 (32%), Positives = 413/896 (46%), Gaps = 223/896 (24%)
Query: 3 DESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLAT 62
+E W SS+NSL +V K +C +DK R+ F + I L+ YCA D
Sbjct: 325 EELWVGRSSVNSLRDVAKFHC-NVTIDKAQRDHFGDLDRSGILERLDELLDYCAAD---- 379
Query: 63 FEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLA 122
V++ T V + +FP FLE PHPV+
Sbjct: 380 ------------------VSI----------------THRVYKQVFPNFLEVCPHPVSFG 405
Query: 123 GMLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDK---YKDS 179
+ LS+ LPVNN W +Y + +T+ ++ L++ CD A ++ DK Y++
Sbjct: 406 ALQHLSSVILPVNNTWDEYLKNAEETYQRRLEYVQKRLVELCDSALAV--KDKPEVYEND 463
Query: 180 LWLWDQDWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRRELVEK 239
WL DWS +++++ K K G+
Sbjct: 464 PWLRQLDWSGQEIRMVKG--------------------RKKGD----------------- 486
Query: 240 FKPLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIPG 299
P + ++P G P+WY+ L SA
Sbjct: 487 -PPRPAARQKMP-------GMPKWYKALFPTSTSAIN----------------------- 515
Query: 300 PSLISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTDIKVPDAENIPLEQLKQLYN 359
+S ++ P LL L+W PL + HGW + +VP E
Sbjct: 516 ---LSVRTRLAPILLKLSWLGYPLVWSDVHGWTF--------QVPKGE----------IK 554
Query: 360 NITKQDNCEANVDNAQN-SLRDSVETNISFIDCSKSAKRLEVIANVLDKKKLAEASSTDT 418
N Q N+ +N SLRD
Sbjct: 555 NFENQAVAPCNMAEEKNFSLRDD------------------------------------- 577
Query: 419 STDDADTPREIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEISRML 478
RE + KLPHKDG +PL++ ++ F L+ AK +E++
Sbjct: 578 --------REHLYFKLPHKDGPDARCSSPLAKGYLQYFEGGKLSSQFALAKEALEMNASC 629
Query: 479 SYWRNNHERVKKQFVVWLNKKDLPRRLVENIESEGRDYGVILPQLIVSGTLTRRAVEATW 538
SYW + +R+ Q VV+ N D+ R ++ + G ILPQ+I GT+TRRAVE TW
Sbjct: 630 SYWISARDRIMSQMVVYHN--DIERLQNKSSSNSTLKQGYILPQIIPMGTITRRAVENTW 687
Query: 539 MTASNAVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWM 598
+TASNA RVGSEL+AM++AP GY +GADVDS+ELWIAS++GD+ + HG +G+M
Sbjct: 688 LTASNAKANRVGSELKAMVRAPPGYVFVGADVDSEELWIASLVGDAQF-QIHGGNAIGFM 746
Query: 599 TLSGQKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAK 658
TL G KS TD+HS TA +GISR AK+ NY RIYGAG +FA LL+QFNP MS+ + K
Sbjct: 747 TLEGTKSAGTDLHSKTASILGISRNDAKVFNYGRIYGAGLKFAATLLRQFNPSMSEQETK 806
Query: 659 SKARKMYTLTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIF-DKPQWYGG 717
A K+Y TKG + R KI D P W GG
Sbjct: 807 RVAAKLYKETKGTRTNR-------------------------------KILSDNPFWRGG 835
Query: 718 TESAMFNRLEEIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHL 777
TES +FN+LEE A +P TP L ++ AL + F+ +RINW +QS VD+LHL
Sbjct: 836 TESFVFNKLEEFAEQERPRTPVLGAGITEALMRRFINKGSFMTSRINWAIQSSGVDYLHL 895
Query: 778 MLVCMRWLVSR---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMT 834
+++ M +L+ R D R I++HDEIRYLV + +KY A+AL V NL TRA +++ +
Sbjct: 896 LIISMDFLIRRFNLDARLAITVHDEIRYLVKEHDKYRAAMALQVANLWTRAMFSQEMGID 955
Query: 835 DIPLSISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKA 890
D+P S ++FS V+ID VLRKE D DC TPS+P IP GE LDI + K
Sbjct: 956 DLPQSCAYFSAVDIDTVLRKEVDMDCVTPSHP------NKIPHGESLDIENLLKKG 1005
>gi|242777655|ref|XP_002479078.1| DNA polymerase gamma [Talaromyces stipitatus ATCC 10500]
gi|218722697|gb|EED22115.1| DNA polymerase gamma [Talaromyces stipitatus ATCC 10500]
Length = 1129
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 292/894 (32%), Positives = 422/894 (47%), Gaps = 223/894 (24%)
Query: 3 DESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLAT 62
+E W SS+NSL +V K +C+ +DK+ R+ F E + I + L+ YCA D T
Sbjct: 327 EELWVGRSSVNSLRDVAKFHCD-VTIDKSQRDYFGELDKDGILSRLDELLDYCAADVAIT 385
Query: 63 FEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLA 122
V + + FP FLE PHPV+
Sbjct: 386 HRVYKKV--------------------------------------FPNFLEVCPHPVSFG 407
Query: 123 GMLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHD-DKYKDSLW 181
+ LS+ LPVN W +Y + T++ +++ L++ C++A + D +Y+ W
Sbjct: 408 ALRHLSSVILPVNETWEQYLQNAENTYHKRLDDVQKRLLELCEEALKIKDDPTQYESDPW 467
Query: 182 LWDQDWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRRELVEKFK 241
L DWS +++K+ K K G+ R + K
Sbjct: 468 LRQLDWSGQEIKMVKG--------------------RKKGDPP---------RPAARQKK 498
Query: 242 PLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIPGPS 301
P G P+WY+ L TS A I
Sbjct: 499 P----------------GMPKWYKDLF----------------------PTSNADIN--- 517
Query: 302 LISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTDIKVPDAENIPLEQLKQLYNNI 361
++ +I P LL L+W S PL + +GW + V + + + +N P+ Q
Sbjct: 518 -LTVRTRIAPILLKLSWDSHPLIWSDKYGWTFRVSLN---EAHNYQNQPVTQ-------- 565
Query: 362 TKQDNCEANVDNAQNSLRDSVETNISFIDCSKSAKRLEVIANVLDKKKLAEASSTDTSTD 421
C+ N ETN D D+K +
Sbjct: 566 -----CDMNE-----------ETNAELRD---------------DRKHV----------- 583
Query: 422 DADTPREIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEISRMLSYW 481
+ KLPHKDG NPL++ ++ F +L+ AK +E++ SYW
Sbjct: 584 ---------YYKLPHKDGPQARCINPLAKGYLTYFERGTLSSKFALAKEALEMNASCSYW 634
Query: 482 RNNHERVKKQFVVWLNKKDLPRRLVENIESEGRDYGVILPQLIVSGTLTRRAVEATWMTA 541
+ +R+ Q VV+ ++ L ++ + G ILPQ+I GT+TRRAVE TW+TA
Sbjct: 635 ISARDRIMSQLVVYEDE------LKRQKKAAKKQLGFILPQVIPMGTITRRAVENTWLTA 688
Query: 542 SNAVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLS 601
SNA RVGSEL+AMI+AP GY +GADVDSQELWIAS++GD+ + HG +G+MTL
Sbjct: 689 SNAKANRVGSELKAMIKAPPGYVFVGADVDSQELWIASLVGDAQF-QLHGGNAIGFMTLE 747
Query: 602 GQKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKA 661
G K+ TD+HS TA +GISR AK+ NY RIYGAG +FA LL+QFNP +++ + A
Sbjct: 748 GSKAAGTDLHSRTASILGISRNDAKVFNYGRIYGAGLKFASTLLRQFNPTLTEKETSQIA 807
Query: 662 RKMYTLTKGKKLYR--LKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQWYGGTE 719
K+Y TKG + R L DG P W GGTE
Sbjct: 808 SKLYKETKGTRTTRKILNDG--------------------------------PFWRGGTE 835
Query: 720 SAMFNRLEEIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLML 779
S +FN+LEE A +P TP L ++ AL + F+ +RINW +QS VD+LHL++
Sbjct: 836 SFVFNKLEEFAEQERPRTPALGAGITEALMRRFINKGSFMTSRINWAIQSSGVDYLHLLI 895
Query: 780 VCMRWLVSR---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDI 836
M +L+ R D R I++HDEIRYLV +E+KY +A+AL + N+ TRA +++ + D+
Sbjct: 896 TAMDFLIRRFNIDARLAITVHDEIRYLVKEEDKYRSAMALQIANVWTRAMFSQQVGIDDL 955
Query: 837 PLSISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKA 890
P S +FFS V+ID VLRKE + DC TPS+P IP GE LDI+Q ++K
Sbjct: 956 PQSCAFFSAVDIDHVLRKEVNMDCVTPSHP------TKIPHGESLDIHQLMEKG 1003
>gi|425767034|gb|EKV05619.1| DNA polymerase gamma [Penicillium digitatum Pd1]
gi|425780196|gb|EKV18213.1| DNA polymerase gamma [Penicillium digitatum PHI26]
Length = 1107
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 291/894 (32%), Positives = 423/894 (47%), Gaps = 222/894 (24%)
Query: 3 DESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLAT 62
+E W SS+NSL +V K +C+ +DK R+ F E + I L+ YCA D T
Sbjct: 291 EELWVGRSSVNSLRDVAKFHCD-VTIDKAQRDFFGELDRDSILGRLEELLDYCAADVAIT 349
Query: 63 FEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLA 122
V + + FP FLE PHPV+ +
Sbjct: 350 HRVYRKV--------------------------------------FPNFLETCPHPVSFS 371
Query: 123 GMLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDK---YKDS 179
+ LS+ LPVN +W +Y + +T++ +++S L+ CD+A L + D+ Y +
Sbjct: 372 ALRHLSSVILPVNQSWEEYLARAEETYHKRLDDVQSKLLALCDEA--LKYKDQPEIYTND 429
Query: 180 LWLWDQDWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRRELVEK 239
WL DWS +++K+ K K G+ R +
Sbjct: 430 PWLQQLDWSGQEIKMAKG--------------------KKKGDPP---------RPAARQ 460
Query: 240 FKPLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIPG 299
KP G P+WY+ L S+ +E
Sbjct: 461 KKP----------------GMPKWYKDLFA--------------------SNAAEI---- 480
Query: 300 PSLISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTDIKVPDAENIPLEQLKQLYN 359
++ +I P LL L+W PL + HGW + +P +Q+KQ N
Sbjct: 481 --NLTVRTRIAPILLKLSWDGFPLVWSDLHGWTF--------------RVPRDQVKQYEN 524
Query: 360 NITKQDNCE-ANVDNAQNSLRDSVETNISFIDCSKSAKRLEVIANVLDKKKLAEASSTDT 418
C+ A NA+ LRD D+K +
Sbjct: 525 QPVVM--CDMAEEKNAK--LRD-------------------------DRKAV-------- 547
Query: 419 STDDADTPREIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEISRML 478
+ K+PHKDG NPL + ++ F L+ AK+ ++++
Sbjct: 548 ------------YYKIPHKDGPQARCTNPLGKGYMQYFERGILSSQYELAKQALDMNASC 595
Query: 479 SYWRNNHERVKKQFVVWLNKKDLPRRLVENIESEGRDYGVILPQLIVSGTLTRRAVEATW 538
SYW + +R+ Q VV+ +D +R + E+ G ILPQ+I GT+TRRAVE TW
Sbjct: 596 SYWISARDRIMGQIVVY---EDQVQRGGDKSEASENRLGFILPQVIPMGTITRRAVENTW 652
Query: 539 MTASNAVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWM 598
+TASNA RVGSEL+AMI+AP GYS +GADVDSQELWIAS++GD+ + HG +G+M
Sbjct: 653 LTASNAKANRVGSELKAMIKAPPGYSFVGADVDSQELWIASLVGDA-PFQIHGGNAIGFM 711
Query: 599 TLSGQKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAK 658
L G K+ TD+HS +A +GISR AK+ NY RIYGAG +FA LL+QFNP +++ +
Sbjct: 712 CLEGSKAEGTDLHSRSASILGISRNDAKVFNYGRIYGAGVKFAATLLRQFNPSLTEKQTQ 771
Query: 659 SKARKMYTLTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQWYGGT 718
A+ +Y TKG + TS + + P W GGT
Sbjct: 772 DTAKNLYKETKGTR------------------------------TSRRLLSETPFWRGGT 801
Query: 719 ESAMFNRLEEIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLM 778
ES +FN+LEE A +P TP L ++ AL + F+ +RINW +QS VD+LHL+
Sbjct: 802 ESFVFNKLEEFADQERPRTPALGAGITEALMRRFINKGSFMTSRINWAIQSSGVDYLHLL 861
Query: 779 LVCMRWLVSR---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTD 835
+V M +L+ + R I++HDEIRYLV DE++Y A+AL V N+ TRA +++ + D
Sbjct: 862 IVGMDYLIRQFNIQARLAITVHDEIRYLVKDEDRYRAAMALQVANVWTRALFSQQVGIDD 921
Query: 836 IPLSISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDK 889
+P S ++FS V+ID VLRKE D DC TPS+P + IP GE LDI Q ++K
Sbjct: 922 LPQSCAYFSAVDIDHVLRKEVDMDCVTPSHP------HKIPHGETLDITQLLEK 969
>gi|358374823|dbj|GAA91412.1| DNA polymerase gamma [Aspergillus kawachii IFO 4308]
Length = 1014
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 293/890 (32%), Positives = 420/890 (47%), Gaps = 215/890 (24%)
Query: 3 DESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLAT 62
+E W SS+NSL +V K +C+ +DK R+ F E + I L+ YCA D T
Sbjct: 206 EELWVGRSSVNSLRDVAKFHCD-VTIDKAQRDYFGELDRDGILGKLEELLDYCAADVAIT 264
Query: 63 FEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLA 122
V + + FP FLE PHPV+
Sbjct: 265 HRVYKKV--------------------------------------FPNFLEVCPHPVSFG 286
Query: 123 GMLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDKYKDSLWL 182
+ LS+ LPVN W +Y + T++ +++ +++ C++A K KD +
Sbjct: 287 ALRHLSSVILPVNETWKEYIANAEATYHQRLEDVQRKMIELCEEAL------KVKDYPDI 340
Query: 183 WDQDWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRRELVEKFKP 242
+ D ++ L + K + ++ + P R + KP
Sbjct: 341 YTNDPWLRQLDWSGQEVKMVKGKKKGDPP----------------------RPAARQKKP 378
Query: 243 LMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIPGPSL 302
G P+WY+ +L SD +
Sbjct: 379 ----------------GMPKWYK-----------------DLFATNTSDIN--------- 396
Query: 303 ISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTDIKVPDAENIPLEQLKQLYNNIT 362
+S +I P LL L+W PL + +GW + KVP ++L N
Sbjct: 397 LSVRTRIAPILLKLSWDGYPLTWSDKYGWTF--------KVP----------RELVKNYE 438
Query: 363 KQDNCEANVDNAQNSLRDSVETNISFIDCSKSAKRLEVIANVLDKKKLAEASSTDTSTDD 422
Q + C S ++ + N D+K +
Sbjct: 439 NQ----------------------PVVLCDMSEEKNPELQN--DRKHV------------ 462
Query: 423 ADTPREIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEISRMLSYWR 482
+ KLPHKDG NPL++ ++ F +L+ AK +E++ SYW
Sbjct: 463 --------YFKLPHKDGPQARCTNPLAKGYMQYFERGTLSSQYALAKEALEMNASCSYWI 514
Query: 483 NNHERVKKQFVVWLNKKDLPRRLVENIESEGRDYGVILPQLIVSGTLTRRAVEATWMTAS 542
+ +R+ Q VV+ +D R + +++ R G ILPQ+I GT+TRRAVE TW+TAS
Sbjct: 515 SARDRIMGQMVVY---EDEVRDQASSSKTDHR-LGFILPQIIPMGTITRRAVENTWLTAS 570
Query: 543 NAVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSG 602
NA G RVGSEL+AMI+AP GYS +GADVDSQELWIAS++GD+ + HG +G+MTL G
Sbjct: 571 NAKGNRVGSELKAMIKAPPGYSFVGADVDSQELWIASLVGDAQF-QIHGGNAIGFMTLEG 629
Query: 603 QKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKAR 662
K+ TDMHS TA+ +GISR AK+ NY RIYGAG +FA LL+QFNP MS+ + A
Sbjct: 630 SKAAGTDMHSRTAQILGISRNDAKVFNYGRIYGAGVKFAATLLRQFNPSMSERQTQEVAT 689
Query: 663 KMYTLTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQWYGGTESAM 722
K+Y TKG + R R +C + P W GGTES +
Sbjct: 690 KLYKETKGTRTTR-------------------RILC-----------EGPFWRGGTESFV 719
Query: 723 FNRLEEIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLVCM 782
FN+LEE A +P TP L ++ AL + F+ +RINW +QS VD+LHL++V M
Sbjct: 720 FNKLEEFAEQERPRTPTLGAGITEALMRRFINKGSFMTSRINWAIQSSGVDYLHLLIVAM 779
Query: 783 RWLVSR---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIPLS 839
+L+ R R I++HDEIRYLV DE+KY ALAL V N+ TRA +++ + D+P S
Sbjct: 780 DYLIRRFNIAARLAITVHDEIRYLVKDEDKYRAALALQVANVWTRAMFSQQVGINDLPQS 839
Query: 840 ISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDK 889
++FS V+ID VLRKE D DC TPS+P + IP GE LD+ Q +DK
Sbjct: 840 CAYFSAVDIDHVLRKEVDMDCVTPSHP------HKIPHGESLDVAQLLDK 883
>gi|378726757|gb|EHY53216.1| DNA polymerase gamma 1 [Exophiala dermatitidis NIH/UT8656]
Length = 1208
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 292/892 (32%), Positives = 408/892 (45%), Gaps = 220/892 (24%)
Query: 3 DESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLAT 62
+E W SS+NSL +V K +C G +DK+ R+ F E E I L+ YCA D T
Sbjct: 328 EELWVARSSINSLRDVAKFHC-GVTIDKSQRDYFGELDREGICERLEELLDYCAADVAIT 386
Query: 63 FEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLA 122
V Q +FP FL+ PHPV+ A
Sbjct: 387 HRVF--------------------------------------QKVFPNFLQTCPHPVSFA 408
Query: 123 GMLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSL-LHDDKYKDSLW 181
+ LS+ LPV+ +W +Y + +T+ E++ L+ + A + + Y + W
Sbjct: 409 ALRHLSSVILPVDRSWDEYIERAERTYQQRLEEVERKLLQLSEAALEVKTQPEVYNNDPW 468
Query: 182 LWDQDWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRRELVEKFK 241
L DWS +++K KK K EEP
Sbjct: 469 LSQLDWSGQEIKYKKTRKKG-------EEP------------------------------ 491
Query: 242 PLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIPGPS 301
+PV G P WY+ L +S P
Sbjct: 492 --------VPVARQKKPGAPNWYKDLFTSNNS--------------------------PI 517
Query: 302 LISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTDIKVPDAENIPLEQLKQLYNNI 361
++ +I P LL L+W PL + HGW + +VP+ E E
Sbjct: 518 NLTVRTRIAPLLLKLSWDGYPLVWSDKHGWTF--------RVPNTEASKYE--------- 560
Query: 362 TKQDNCEANVDNAQNSLRDSVETNISFIDCSKSAKRLEVIANVLDKKKLAEASSTDTSTD 421
N + + C ++E ++ +D
Sbjct: 561 -----------------------NSNVVSCD-----------------MSEEANLALKSD 580
Query: 422 DADTPREIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEISRMLSYW 481
T + KLPHKDG +PL++ ++ F L+ A+ +E++ SYW
Sbjct: 581 YRHT-----YFKLPHKDGPTARCASPLAKGYLQYFESGILSSQYELAREALEMNASCSYW 635
Query: 482 RNNHERVKKQFVVWLNKKDLPRRLVENIESEGRDYGVILPQLIVSGTLTRRAVEATWMTA 541
+ +R+ Q VV + D L E G ILPQ+I GT+TRRAVE TW+TA
Sbjct: 636 ISARDRIMSQMVV--READRDPSLAGKSEQ-----GFILPQIIPMGTITRRAVENTWLTA 688
Query: 542 SNAVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLS 601
SNA RVGSEL+AM++AP GY +GADVDSQELWIAS++GD+ + HG +G+MTL
Sbjct: 689 SNAKANRVGSELKAMVRAPPGYCFVGADVDSQELWIASLVGDAQF-QLHGGNAIGFMTLE 747
Query: 602 GQKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKA 661
G K+ TD+HS TAK +GISR AK+ NY RIYGAG +FA LL+QFNP +S++ + A
Sbjct: 748 GTKAAGTDLHSKTAKILGISRNDAKVFNYGRIYGAGLKFAATLLRQFNPTLSEAQSNQIA 807
Query: 662 RKMYTLTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQWYGGTESA 721
K+Y TKG + R G N S W GGTES
Sbjct: 808 MKLYKETKGTRTRRKAFG----------------------NGSF--------WRGGTESF 837
Query: 722 MFNRLEEIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLVC 781
+FN+LEE A +P TP L ++ AL + F+ +RINW +QS VD+LHL+++
Sbjct: 838 VFNKLEEFAEQERPRTPVLGAGITEALMRRFINQGSFMTSRINWAIQSSGVDYLHLLIIS 897
Query: 782 MRWLVSR---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIPL 838
M +L+ R D R I++HDEIRYLV E+ Y ALAL ++NL TRA +++ + D+P
Sbjct: 898 MDYLIRRFSLDARLAITVHDEIRYLVKKEDSYRAALALQISNLWTRAMFSQQMGIEDLPQ 957
Query: 839 SISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKA 890
S +FFS V+ID VLRKE D DC TPS+P IP GE LDI Q + K
Sbjct: 958 SCAFFSAVDIDHVLRKEVDMDCVTPSHP------DKIPHGESLDINQLLAKG 1003
>gi|406603184|emb|CCH45279.1| DNA polymerase gamma 1 [Wickerhamomyces ciferrii]
Length = 1196
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 292/903 (32%), Positives = 422/903 (46%), Gaps = 204/903 (22%)
Query: 4 ESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLATF 63
+ W + S+ NSL+ V K YC+ LDK R+ F + I N+ NLM YCA D +AT
Sbjct: 304 DPWVDESAPNSLAAVAKFYCD-MTLDKDVRDSFAGDDITLIRENFQNLMNYCAND-VAT- 360
Query: 64 EVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLAG 123
T+++ + P FL+ PHPV+ A
Sbjct: 361 ------------------------------------TYKIYTQVLPEFLKVCPHPVSFAA 384
Query: 124 MLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDKY--KDSLW 181
+ + L N +W KY + + + ++ L+ ++A L K KD W
Sbjct: 385 LRFMGAGILTTNKDWEKYLKAAETLYQEAKAKVHQHLVSLVNKALKLKDKPKVIEKDP-W 443
Query: 182 LWDQDWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRRELVEKFK 241
L DW++ YE +KF+
Sbjct: 444 LSQLDWTI-------------------------YE---------------------QKFR 457
Query: 242 PLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIP--G 299
KD P + L GYPEWYR + +IP G
Sbjct: 458 -----KDGQPYKNQKLAGYPEWYRDM----------------------------YIPSTG 484
Query: 300 PSLISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTDIKVPDAENIPLEQLKQLYN 359
+ST +ITP L LTW+ P+ + +GW + D+ D E + + Y
Sbjct: 485 KLNLSTRSRITPILFKLTWEGFPVVWSDVYGWCF----RADVDKYD------EMIAKTYL 534
Query: 360 NITKQDNCEANVDNAQNSLRDSVETNISFIDCSKSAKRLEVIANVLDKKKLAEASSTDTS 419
I N + N++ ID S +++K+ +
Sbjct: 535 FIK---NFTVKKRTEEEEEEMKFNNNVNDIDIFGSLN--------INEKRESPKKDKPAP 583
Query: 420 TDDADTPREIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEISRMLS 479
TD + + K+P+ G L++ F + F L+ AK ++I+ S
Sbjct: 584 TD------QYAYFKIPNNAGPEARTALLLAKSFASSFEKGILSSESAFAKEALDINASCS 637
Query: 480 YWRNNHERVKKQFVVWLNKKDLPRRLVENIESEGRDYGVILPQLIVSGTLTRRAVEATWM 539
YW ++ ER+ QFV + + Y +ILPQL+ GT+TRRAVE TW+
Sbjct: 638 YWISSRERIMNQFVY----------------HKTKGYSIILPQLLTMGTITRRAVEKTWL 681
Query: 540 TASNAVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMT 599
TASNA R+GSEL++ I+AP GY I+GADVDS+ELWIAS++GDS K HG T +GWMT
Sbjct: 682 TASNAKKTRIGSELKSKIKAPKGYCIVGADVDSEELWIASLVGDS-MFKLHGGTAIGWMT 740
Query: 600 LSGQKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKS 659
L G K+ TD+HS TA +GISR AKI NY RIYGAG +FA RLLKQFNP+++ + +
Sbjct: 741 LEGTKNEGTDLHSKTASILGISRNEAKIFNYGRIYGAGLKFATRLLKQFNPKLTDKECEV 800
Query: 660 KARKMYTLTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQWYGGTE 719
+A+ +Y TKG+ L K+ I W GGTE
Sbjct: 801 RAKNLYNSTKGQSLKIYKNDDKGTRI----------------------------WVGGTE 832
Query: 720 SAMFNRLEEIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLML 779
S +FN+LE IA P TP L +++AL + + F+ +R+NW +QS VD+LHL+
Sbjct: 833 SILFNQLESIAEQDNPKTPVLGAGITKALMKKNLKKNSFLPSRVNWAIQSSGVDYLHLLC 892
Query: 780 VCMRWLVSR---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDI 836
V M +L+++ + R +S+HDEIRYLV +++KY A+AL ++NL TR ++L ++D+
Sbjct: 893 VSMNYLINKYKINARLSLSVHDEIRYLVKEKDKYRAAMALQISNLWTRGIFCERLGISDV 952
Query: 837 PLSISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKANGVIGT 896
P S +FFS V+ID VLRKE D DC TPSN IP GE LDI Q +DK +G
Sbjct: 953 PQSCAFFSAVDIDHVLRKEVDMDCITPSN------KIPIPPGESLDINQLLDKPESELGE 1006
Query: 897 FKN 899
K+
Sbjct: 1007 AKD 1009
>gi|225561715|gb|EEH09995.1| DNA polymerase gamma [Ajellomyces capsulatus G186AR]
Length = 1146
Score = 427 bits (1098), Expect = e-116, Method: Compositional matrix adjust.
Identities = 293/893 (32%), Positives = 409/893 (45%), Gaps = 223/893 (24%)
Query: 6 WTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLATFEV 65
W SS+NSL +V K +C +DK R+ F + I L+ YCA D T V
Sbjct: 328 WVGRSSVNSLRDVAKFHC-NVTIDKAQRDHFGDLDRSGILERLDELLDYCAADVSITHRV 386
Query: 66 IQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLAGML 125
+ +FP FLE PHPV+ + L
Sbjct: 387 YKQVFPNFLEVCPHPVSFGALQHL------------------------------------ 410
Query: 126 ELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDK---YKDSLWL 182
S+ LPVNN W +Y + +T+ ++ L++ CD A ++ DK Y++ WL
Sbjct: 411 --SSVILPVNNTWDEYLKNAEETYQRRLEYVQKRLVELCDSALAV--KDKPEVYENDPWL 466
Query: 183 WDQDWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRRELVEKFKP 242
DWS +++++ K K G+ P
Sbjct: 467 RQLDWSGQEIRMVKG--------------------RKKGD------------------PP 488
Query: 243 LMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIPGPSL 302
+ ++P G P+WY+ L SA
Sbjct: 489 RPAARQKMP-------GMPKWYKALFPTSTSAIN-------------------------- 515
Query: 303 ISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTDIKVPDAENIPLEQLKQLYNNIT 362
+S ++ P LL L+W PL + HGW + VP K N
Sbjct: 516 LSVRTRLAPILLKLSWLGYPLVWSDVHGWTFQVP------------------KGEIKNFE 557
Query: 363 KQDNCEANVDNAQN-SLRDSVETNISFIDCSKSAKRLEVIANVLDKKKLAEASSTDTSTD 421
Q N+ +N SLRD D++ L
Sbjct: 558 NQAVAPCNMAEEKNLSLRD-------------------------DREHL----------- 581
Query: 422 DADTPREIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEISRMLSYW 481
+ KLPHKDG +PL++ ++ F L+ AK +E++ SYW
Sbjct: 582 ---------YFKLPHKDGPDARCSSPLAKGYLQYFEGGKLSSQFALAKEALEMNASCSYW 632
Query: 482 RNNHERVKKQFVVWLNKKDLPRRLVENIESEGRDYGVILPQLIVSGTLTRRAVEATWMTA 541
+ +R+ Q VV+ N D+ R ++ + G ILPQ+I GT+TRRAVE TW+TA
Sbjct: 633 ISARDRIMSQMVVYHN--DIERLQNKSSSNSTLKQGYILPQIIPMGTITRRAVENTWLTA 690
Query: 542 SNAVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLS 601
SNA RVGSEL+AM++AP GY +GADVDS+ELWIAS++GD+ + HG +G+MTL
Sbjct: 691 SNAKANRVGSELKAMVRAPPGYVFVGADVDSEELWIASLVGDAQF-QIHGGNAIGFMTLE 749
Query: 602 GQKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKA 661
G KS TD+HS TA +GISR AK+ NY RIYGAG +FA LL+QFNP MS+ + K A
Sbjct: 750 GTKSAGTDLHSKTANILGISRNDAKVFNYGRIYGAGLKFAATLLRQFNPSMSEQETKRVA 809
Query: 662 RKMYTLTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIF-DKPQWYGGTES 720
K+Y TKG + R KI D P W GGTES
Sbjct: 810 AKLYEETKGTRTNR-------------------------------KILSDNPFWRGGTES 838
Query: 721 AMFNRLEEIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLV 780
+FN+LEE A +P TP L ++ AL + F+ +RINW +QS VD+LHL+++
Sbjct: 839 FVFNKLEEFAEQERPRTPVLGAGITEALMRRFINKGSFMTSRINWAIQSSGVDYLHLLII 898
Query: 781 CMRWLVSR---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIP 837
M +L+ R D R I++HDEIRYLV + +KY A+AL V NL TRA +++ + D+P
Sbjct: 899 SMDFLIRRFNLDARLAITVHDEIRYLVKEHDKYRAAMALQVANLWTRAMFSQEMGIDDLP 958
Query: 838 LSISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKA 890
S ++FS V+ID VLRKE D DC TPS+P IP GE LDI + K
Sbjct: 959 QSCAYFSAVDIDTVLRKEVDMDCVTPSHP------NKIPHGESLDIENLLKKG 1005
>gi|396486347|ref|XP_003842394.1| similar to DNA polymerase gamma [Leptosphaeria maculans JN3]
gi|312218970|emb|CBX98915.1| similar to DNA polymerase gamma [Leptosphaeria maculans JN3]
Length = 1168
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 287/894 (32%), Positives = 408/894 (45%), Gaps = 214/894 (23%)
Query: 3 DESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLAT 62
+E W + S++NSL EV K +C +DK R F E I L+ YCA D T
Sbjct: 322 EELWISRSAVNSLREVAKFHC-NITMDKAQREYFGELDRAGIREKLDELLDYCAGDVETT 380
Query: 63 FEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLA 122
V Q + FP+F+E PHPV+ A
Sbjct: 381 HRVYQKV--------------------------------------FPIFMETCPHPVSFA 402
Query: 123 GMLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDK-YKDSLW 181
+ L+ LPVN W Y + T+ L+ +K L+ D+A + + Y + W
Sbjct: 403 ALRFLAAEILPVNETWDAYVKNAEATYRKLDDAVKERLVALTDKALEVKEQPEVYNNDPW 462
Query: 182 LWDQDWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRRELVEKFK 241
L +WS +++K+ K K G+ R + K
Sbjct: 463 LSQLNWSGQEIKMAKG--------------------KKKGDPP---------RPAARQKK 493
Query: 242 PLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIPGPS 301
P G P+WY+ L S+T+ P
Sbjct: 494 P----------------GMPKWYKDLFT--------------------SNTA------PL 511
Query: 302 LISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTDIKVPDAENIPLEQLKQLYNNI 361
++ ++ P LL L W PL + HGW Y +P++++ YN
Sbjct: 512 NLTVRTRVAPILLRLAWDGYPLVWSDVHGWTY--------------QVPMDEVFA-YNK- 555
Query: 362 TKQDNCEANVDNAQNSLRDSVETNISFIDCSKSAKRLEVIANVLDKKKLAEASSTDTSTD 421
N L S E N+ D +A R
Sbjct: 556 -----------NGLQELDMSEEENLKLRD--DTAHR------------------------ 578
Query: 422 DADTPREIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEISRMLSYW 481
+ K+PHKDG NPL++ ++ F L AK +E++ SYW
Sbjct: 579 ---------YYKIPHKDGPQARCANPLAKAYLAYFEKGRLTSEYAYAKEALEMNASCSYW 629
Query: 482 RNNHERVKKQFVVW-LNKKDLPRRLVENIESEGRDYGVILPQLIVSGTLTRRAVEATWMT 540
+ +R+ Q VV+ P+ + + G+ G ILPQ+I GT+TRR+VE TW+T
Sbjct: 630 ISARDRITSQMVVYNAEVPKAPKLASASGKGRGKKVGFILPQIIPMGTITRRSVENTWLT 689
Query: 541 ASNAVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTL 600
ASNA RVGSEL++M++AP+GY +GADVDSQELWIAS+IGD+ K HG +G+MTL
Sbjct: 690 ASNAKKNRVGSELKSMVRAPEGYCFVGADVDSQELWIASLIGDA-TFKLHGGNAVGFMTL 748
Query: 601 SGQKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSK 660
G K+ TD+HS TA +GISR AK+ NY RIYGAG +FA LL+QFNP ++
Sbjct: 749 EGTKAAGTDLHSRTAGILGISRNAAKVFNYGRIYGAGLKFAATLLRQFNPTLTDEQTLKT 808
Query: 661 ARKMYTLTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQWYGGTES 720
A +Y TKGKK R ++ ++P W GGTES
Sbjct: 809 ANDLYQNTKGKKTVR------------------------------KQLHERPFWRGGTES 838
Query: 721 AMFNRLEEIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLV 780
+FN+LE+ A +P TP L ++ AL+ F+ +RINW +QS VD+LHL++V
Sbjct: 839 FVFNKLEDFAEQERPRTPVLGAAITEALQRRYLTRGGFMTSRINWAIQSSGVDYLHLLIV 898
Query: 781 CMRWLVSR---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIP 837
M +L R D R I++HDEIRYLV D++KY A+AL V NL TRA +++ + ++P
Sbjct: 899 SMDFLTRRYNLDARLAITVHDEIRYLVADKDKYRAAMALQVANLWTRAMFSQQMGINELP 958
Query: 838 LSISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKAN 891
S ++FS V+IDKVLRKE D DC TPS+ IP GE LDI ++K +
Sbjct: 959 QSCAYFSAVDIDKVLRKEVDMDCITPSH------HTPIPHGESLDILSLLEKGS 1006
>gi|154283185|ref|XP_001542388.1| DNA polymerase gamma [Ajellomyces capsulatus NAm1]
gi|150410568|gb|EDN05956.1| DNA polymerase gamma [Ajellomyces capsulatus NAm1]
Length = 1126
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 292/893 (32%), Positives = 408/893 (45%), Gaps = 223/893 (24%)
Query: 6 WTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLATFEV 65
W SS+NSL +V K +C +DK R+ F + I L+ YCA D T V
Sbjct: 308 WVGRSSVNSLRDVAKFHC-NVTIDKAQRDHFGDLDRSGILERLDELLDYCAADVSITHRV 366
Query: 66 IQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLAGML 125
+ +FP FLE PHPV+ + L
Sbjct: 367 YKQVFPNFLEVCPHPVSFGALQHL------------------------------------ 390
Query: 126 ELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDK---YKDSLWL 182
S+ LPVNN W +Y + +T+ ++ L++ CD A ++ DK Y++ WL
Sbjct: 391 --SSVILPVNNTWDEYLKNAEETYQRRLEYVQKRLVELCDNALAV--KDKPEVYENDPWL 446
Query: 183 WDQDWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRRELVEKFKP 242
DWS +++++ K K G+ P
Sbjct: 447 RQLDWSGQEIRMVKG--------------------RKKGD------------------PP 468
Query: 243 LMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIPGPSL 302
+ ++P G P+WY+ L SA
Sbjct: 469 RPAARQKMP-------GMPKWYKALFPTSTSAIN-------------------------- 495
Query: 303 ISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTDIKVPDAENIPLEQLKQLYNNIT 362
+S ++ P LL L+W PL + HGW + VP K N
Sbjct: 496 LSVRTRLAPILLKLSWLGYPLVWSDVHGWTFQVP------------------KGEIKNFE 537
Query: 363 KQDNCEANVDNAQN-SLRDSVETNISFIDCSKSAKRLEVIANVLDKKKLAEASSTDTSTD 421
Q N+ +N SLRD D++ L
Sbjct: 538 NQAVAPCNMAEEKNLSLRD-------------------------DREHL----------- 561
Query: 422 DADTPREIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEISRMLSYW 481
+ KLPHKDG +PL++ ++ F L+ AK +E++ SYW
Sbjct: 562 ---------YFKLPHKDGPDARCSSPLAKGYLQYFEGGKLSSQFALAKEALEMNASCSYW 612
Query: 482 RNNHERVKKQFVVWLNKKDLPRRLVENIESEGRDYGVILPQLIVSGTLTRRAVEATWMTA 541
+ +R+ Q VV+ N D+ R ++ + G ILPQ+I GT+TRRAVE TW+TA
Sbjct: 613 ISARDRIMSQMVVYHN--DIERLQNKSSSNSTLKQGYILPQIIPMGTITRRAVENTWLTA 670
Query: 542 SNAVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLS 601
SNA RVGSEL+AM++AP GY +GADVDS+ELWIAS++GD+ + HG +G+MTL
Sbjct: 671 SNAKANRVGSELKAMVRAPPGYVFVGADVDSEELWIASLVGDAQF-QIHGGNAIGFMTLE 729
Query: 602 GQKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKA 661
G KS TD+HS TA +GISR AK+ NY RIYGAG +FA LL+QFNP MS+ + K A
Sbjct: 730 GTKSAGTDLHSKTANILGISRNDAKVFNYGRIYGAGLKFAATLLRQFNPSMSEQETKRVA 789
Query: 662 RKMYTLTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIF-DKPQWYGGTES 720
+Y TKG + R KI D P W GGTES
Sbjct: 790 ANLYKETKGTRTNR-------------------------------KILSDNPFWRGGTES 818
Query: 721 AMFNRLEEIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLV 780
+FN+LEE A +P TP L ++ AL + F+ +RINW +QS VD+LHL+++
Sbjct: 819 FVFNKLEEFAEQERPRTPVLGAGITEALMRRFINKGSFMTSRINWAIQSSGVDYLHLLII 878
Query: 781 CMRWLVSR---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIP 837
M +L+ R D R I++HDEIRYLV + +KY A+AL V NL TRA +++ + D+P
Sbjct: 879 SMDFLIRRFNLDARLAITVHDEIRYLVKEHDKYRAAMALQVANLWTRAMFSQEMGIDDLP 938
Query: 838 LSISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKA 890
S ++FS V+ID VLRKE D DC TPS+P IP GE LDI + K
Sbjct: 939 QSCAYFSAVDIDTVLRKEVDMDCVTPSHP------NKIPHGESLDIENLLKKG 985
>gi|320586879|gb|EFW99542.1| DNA polymerase gamma [Grosmannia clavigera kw1407]
Length = 1168
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 284/885 (32%), Positives = 417/885 (47%), Gaps = 209/885 (23%)
Query: 3 DESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLAT 62
+E W SS+NSL +V K + + +DK+ R+ F + + +L+ YCA D T
Sbjct: 320 EELWVGRSSVNSLRDVAKFHLD-VAIDKSVRDEFGVLDRTGVLDKLDSLLYYCAADVAVT 378
Query: 63 FEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLA 122
V Q +FP FL+ PHPV+ A
Sbjct: 379 HRVF--------------------------------------QIVFPNFLDVCPHPVSFA 400
Query: 123 GMLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHD-DKYKDSLW 181
+ LS+ LPVN +W Y + T+ L+ ++ L+ ++A +L D DK+ W
Sbjct: 401 ALRHLSSVILPVNKSWETYIANAEATYLQLSDAVQGRLISLANEALEILDDQDKWSQDPW 460
Query: 182 LWDQDWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRRELVEKFK 241
+ DWSV+ +++ K K E +
Sbjct: 461 MQQLDWSVQPVRMVKGKRKG------------------------------------EADR 484
Query: 242 PLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIPGPS 301
P + K + G P WY+ G+ ++ A I
Sbjct: 485 PALNQK---------MPGKPTWYK----------------------GLFPSANAEIN--- 510
Query: 302 LISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTDIKVPDAENIPLEQLKQLYNNI 361
++ +I P LL L+W PL + HGW + +VP +E + +Q KQ+
Sbjct: 511 -LTVRTRIAPILLRLSWDGRPLVWSDKHGWTF--------RVPVSEAVHYDQ-KQMAR-- 558
Query: 362 TKQDNCEANVDNAQNSLRDSVETNISFIDCSKSAKRLEVIANVLDKKKLAEASSTDTSTD 421
C +++E++ N +
Sbjct: 559 -----------------------------CDMEDEKIELLKNDVHHV------------- 576
Query: 422 DADTPREIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEISRMLSYW 481
+ KLPHKDG NP+++ +++ F L+ AK +E++ SYW
Sbjct: 577 ---------YFKLPHKDGPTARCVNPMAKSYLSYFEQGLLSSEFAYAKEALEMNASCSYW 627
Query: 482 RNNHERVKKQFVVWLNK--KDLPRRLVENIESEGRDYGVILPQLIVSGTLTRRAVEATWM 539
+ +R+K Q VV+ + + ++ ES RD G ILPQ+I GT+TRRAVE TW+
Sbjct: 628 MSARDRIKSQLVVYNGQLSEASEESKADDDESAVRDQGFILPQVIPMGTVTRRAVENTWL 687
Query: 540 TASNAVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMT 599
TASNA RVGSEL+AM++AP GYS +GADVDS+ELWIASV+GD+ HG +G+MT
Sbjct: 688 TASNAKKNRVGSELKAMVKAPPGYSFVGADVDSEELWIASVVGDATFGL-HGGNAIGFMT 746
Query: 600 LSGQKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKS 659
L G K+ TD+HS TA +GI+R AK+ NY RIYGAG RFA +LL+QFNP +S+++ S
Sbjct: 747 LEGTKAAGTDLHSRTASILGITRNDAKVFNYGRIYGAGLRFAAQLLRQFNPSLSEAETVS 806
Query: 660 KARKMYTLTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQWYGGTE 719
A K+Y TKG + R + +C +P W GGTE
Sbjct: 807 IATKLYLATKGTRTNR-------------------KALCK-----------RPFWRGGTE 836
Query: 720 SAMFNRLEEIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLML 779
S +FNRLEE A +P TP L ++ AL ++ +RINW +QS D+LHL++
Sbjct: 837 SFVFNRLEEFAEQERPRTPVLGAGITEALMGRFISKGGYLTSRINWAIQSSGQDYLHLLI 896
Query: 780 VCMRWLVSR---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDI 836
V M +L+ R D R I++HDEIRYLV + +KY TA+AL V N+ TRA +++ + D+
Sbjct: 897 VAMDYLIRRFKIDARLAITVHDEIRYLVGNHDKYRTAMALQVANVWTRAMFSEQVGIRDL 956
Query: 837 PLSISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEIL 881
P S +FFS V+ID VLRKE D DC TPS+ + G I L +L
Sbjct: 957 PQSCAFFSAVDIDHVLRKEVDMDCVTPSHKEKIPHGESIDLPTLL 1001
>gi|322709296|gb|EFZ00872.1| DNA polymerase gamma [Metarhizium anisopliae ARSEF 23]
Length = 1090
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 285/896 (31%), Positives = 411/896 (45%), Gaps = 219/896 (24%)
Query: 3 DESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLAT 62
+E W SS+NSL +V K + + DK R+ F E + + LM YCA D T
Sbjct: 269 EELWVERSSVNSLRDVAKFHLNVSI-DKAVRDDFGELDRKGVLAKLDELMDYCAADVAIT 327
Query: 63 FEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLA 122
V Q +FP FLE PHPV+ A
Sbjct: 328 HR--------------------------------------VYQIVFPNFLEVCPHPVSFA 349
Query: 123 GMLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHD-DKYKDSLW 181
+ L++ LPVN +W Y + T++ L+ ++ L+ ++A + D K+++ W
Sbjct: 350 ALRHLASVILPVNKSWDAYIANAEATYHKLSDAVQERLVGLTEKALEIKSDITKWQNDPW 409
Query: 182 LWDQDWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRRELVEKFK 241
+ DWS +++++ K K ++P R + K
Sbjct: 410 MKQLDWSGQEVRMVKGKRK--------DDPP---------------------RPAARQKK 440
Query: 242 PLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIPGPS 301
P G P+WY+ L K S P
Sbjct: 441 P----------------GMPQWYKDLFPKNDS--------------------------PI 458
Query: 302 LISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTDIKVPDAENIPLEQLKQLYNNI 361
I+ +I P LL L W PL + +GW + +VP E+
Sbjct: 459 NITVRTRIAPLLLRLAWDGHPLFWSDKYGWTF--------RVPRDESA----------KY 500
Query: 362 TKQDNCEANVDNAQNSLRDSVETNISFIDCSKSAKRLEVIANVLDKKKLAEASSTDTSTD 421
T + + D +LRD
Sbjct: 501 TAKQMVQCAFDETDLALRDD---------------------------------------- 520
Query: 422 DADTPREIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEISRMLSYW 481
RE + KLPHKDG NP+++ ++ F +L+ AK +E++ SYW
Sbjct: 521 -----REHYYFKLPHKDGPTARCANPMAKGYLRYFEAGTLSSEYEYAKEALEMNASCSYW 575
Query: 482 RNNHERVKKQFVVWLNKKDLPRRLVEN---IESEGRDYGVILPQLIVSGTLTRRAVEATW 538
+ +R+ Q VV+ KD+P R +S+ YG ILPQ+I GT+TRRAVE TW
Sbjct: 576 ISARDRIMSQMVVY--DKDIPNRQASGRPRTKSKADSYGFILPQVIPMGTITRRAVENTW 633
Query: 539 MTASNAVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWM 598
+TASNA RVGSEL+AM++AP GY +GADVDS+ELWIAS++GD+ K HG +G+M
Sbjct: 634 LTASNAKKNRVGSELKAMVKAPKGYCFVGADVDSEELWIASLVGDA-TFKLHGGNAIGFM 692
Query: 599 TLSGQKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAK 658
TL G K+ TD+HS TA +GI+R AK+ NY RIYGAG +FA LL+QFNP +S+
Sbjct: 693 TLEGTKAAGTDLHSRTAGILGITRNDAKVFNYGRIYGAGLKFAATLLRQFNPSLSERQTM 752
Query: 659 SKARKMYTLTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQWYGGT 718
A ++Y TKG K T+ I +KP W GGT
Sbjct: 753 EVASRLYANTKGTK------------------------------TNRKVIHNKPFWRGGT 782
Query: 719 ESAMFNRLEEIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLM 778
ES +FN+LEE A +P TP L ++ AL ++ +RINW +QS VD+LHL+
Sbjct: 783 ESFVFNKLEEFAEQERPRTPVLGAGITEALMSRFISKGGYLTSRINWAIQSSGVDYLHLL 842
Query: 779 LVCMRWLVSR---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTD 835
+V M +L+ R R I++HDEIRYLV +++KY A+AL V N+ TRA +++ + D
Sbjct: 843 IVSMDFLIRRFNISARLAITVHDEIRYLVKEQDKYRAAMALQVANVWTRAMFAQQVGIND 902
Query: 836 IPLSISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKAN 891
+P S ++FS V+ID VLRKE D DC TPS+P + GE LDI ++K +
Sbjct: 903 LPQSCAYFSAVDIDHVLRKEVDMDCITPSHPTAIAP------GESLDISTLLEKGS 952
>gi|402221723|gb|EJU01791.1| hypothetical protein DACRYDRAFT_94814 [Dacryopinax sp. DJM-731 SS1]
Length = 1386
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 225/483 (46%), Positives = 304/483 (62%), Gaps = 55/483 (11%)
Query: 430 GFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAG-----VDIGAKRI----IEISRMLSY 480
GF KLPHK GE NVGNPL++ F+ SD L D A+R ++++ SY
Sbjct: 823 GFYKLPHKAGEESNVGNPLAKTFVKYASDGILTADNGEDADADAQRCAADAMDMNAQCSY 882
Query: 481 WRNNHERVKKQFVVWLNKK------DLPRRLVENIESEGRDYGVILPQLIVSGTLTRRAV 534
W + +RV Q VVW ++ D+ N ++ G+ G+ILPQ+I GT+TRRA+
Sbjct: 883 WISARDRVMNQMVVWQDQATSASALDMGFANEPNNQAPGKKRGIILPQVIAMGTVTRRAI 942
Query: 535 EATWMTASNAVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATP 594
E TW+TASNA RVGSEL+AM++AP+GYSI+GADVDS+ELWI+SV+GD+ HGAT
Sbjct: 943 EKTWLTASNAKPNRVGSELKAMVRAPEGYSIVGADVDSEELWISSVMGDAQFGM-HGATA 1001
Query: 595 LGWMTLSGQKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSK 654
+GWMTL G K+N TD+HS TA +GISR+ AKI NY+RIYGAG + A+ L+ Q NP++
Sbjct: 1002 IGWMTLEGTKANGTDLHSKTANILGISRDQAKIFNYSRIYGAGLKHAQLLMLQSNPKLLV 1061
Query: 655 SDAKSKARKMYTLTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQW 714
DAKS +K+Y TKG+ T D+ FD+ W
Sbjct: 1062 DDAKSLVQKLYASTKGQ------------------------------TTRTDRFFDRKFW 1091
Query: 715 YGGTESAMFNRLEEIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDF 774
+GGTES +FN+LEEIA S +P+TP L C ++RAL D S+++ +RINWVVQS VD+
Sbjct: 1092 FGGTESFLFNKLEEIALSDKPLTPALGCGITRALTKEYLDPSEYLPSRINWVVQSSGVDY 1151
Query: 775 LHLMLVCMRWLVSR---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKL 831
LHL++V MR+L+ + R++IS+HDE+RYLV DE++Y ALAL + N+ TR+ KL
Sbjct: 1152 LHLLIVAMRYLIHKYDISARYLISVHDELRYLVKDEDRYRAALALQIANIWTRSLFSFKL 1211
Query: 832 DMTDIPLSISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKAN 891
M D+P ++FFS V+IDK LRKE+D C TPS L P G+ LDI Q + N
Sbjct: 1212 GMDDLPQGVAFFSAVDIDKYLRKETDMTCVTPSQTEPL------PPGQSLDIEQLLKVTN 1265
Query: 892 GVI 894
G I
Sbjct: 1266 GGI 1268
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 49/90 (54%), Gaps = 1/90 (1%)
Query: 6 WTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLATFEV 65
W +SS NSL +V +L+C G ++K R + S E+I + + YCA D T EV
Sbjct: 377 WEEMSSGNSLVDVARLHC-GLTIEKDAREDLLTFSREEITRDLPAYIGYCAGDVATTHEV 435
Query: 66 IQALFPLFLERFPHPVTLAGMLELSTAYLP 95
+ + P FL P PVT AG+ + ++LP
Sbjct: 436 FRVVLPSFLATCPSPVTWAGVGTMGQSFLP 465
>gi|367007070|ref|XP_003688265.1| hypothetical protein TPHA_0N00510 [Tetrapisispora phaffii CBS 4417]
gi|357526573|emb|CCE65831.1| hypothetical protein TPHA_0N00510 [Tetrapisispora phaffii CBS 4417]
Length = 1318
Score = 421 bits (1081), Expect = e-114, Method: Compositional matrix adjust.
Identities = 285/898 (31%), Positives = 427/898 (47%), Gaps = 222/898 (24%)
Query: 1 MTDESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTL 60
+ ++ W +V+S+NSLS+V L+C K +DK R+ F ++I +N+ +L+ YCA D
Sbjct: 338 VAEDPWLDVASMNSLSDVALLHCNIK-MDKNPRDFFASKDKQEIVDNFQHLVNYCATDV- 395
Query: 61 ATFEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVT 120
EV T +V +FPL++E+ PHP++
Sbjct: 396 ---EV----------------------------------TSKVFDKVFPLYMEKCPHPIS 418
Query: 121 LAGMLELSTAYLPVN-NNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDKYKDS 179
++ LS+ LP + W Y N S + + ++ + + D+ + D ++
Sbjct: 419 FGALVSLSSCILPTKYDEWKNYINNSEGIYQESKNLIEKKIKEIMDEVVNSKDDPNFQSI 478
Query: 180 L----WLWDQDWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRRE 235
+ WL DW++K +++ ++T +P
Sbjct: 479 INNDPWLRQLDWTIKPVRM----------SKKTNQP------------------------ 504
Query: 236 LVEKFKPLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEA 295
+ +LP GYPEWYR L S D
Sbjct: 505 ----------SIKKLP-------GYPEWYRALFPTQESKDPK------------------ 529
Query: 296 WIPGPSLISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTDIKVPDAENIPLEQLK 355
++ +I P L L+W+ P+ + + GW + P+E K
Sbjct: 530 -------VTIRTRIVPLLFKLSWEGQPVVWTKMSGWCF----------------PVE--K 564
Query: 356 QLYNNITKQDNCEANVDNAQNSLRDSVETNISFIDCSKSAKRLEVIANVLDKKKLAEASS 415
Q N+ K++ A+ D + A E+I LD K +
Sbjct: 565 QDVENMKKKNYLLAD-------------------DIAIQAYNEELIE--LDPK-----AK 598
Query: 416 TDTSTDDADTPREIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEIS 475
DT K+PH +G N + LS+ +I+ F N + A ++I+
Sbjct: 599 GDTV-----------LFKVPHPNGPEFNCTSLLSKPYIHYFEKNIMTSRSQHAHEALKIN 647
Query: 476 RMLSYWRNNHERVKKQFVVWLNKKD-------LPRRLVENIESEGRDYGVILPQLIVSGT 528
SYW + ER+ QFVV K+D LP +N S G + +ILP +I GT
Sbjct: 648 SSASYWISARERIMSQFVV--KKEDFSDQFQTLPSNKTQN--SLGDNTSIILPPIIPMGT 703
Query: 529 LTRRAVEATWMTASNAVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAK 588
+TRRAVE TW+TASNA R+GSEL+A I APDGY +GADVDS+ELWIAS++GDS
Sbjct: 704 VTRRAVEKTWLTASNAKKNRIGSELKAKIVAPDGYCFVGADVDSEELWIASLVGDS-VFN 762
Query: 589 EHGATPLGWMTLSGQKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQF 648
HG T +GWM L G K+ TD+H+ TA +G SR AKI NY RIYGAG +FA LLK F
Sbjct: 763 VHGGTAIGWMCLEGTKNEGTDLHTKTADLLGCSRNEAKIFNYGRIYGAGVKFASLLLKNF 822
Query: 649 NPEMSKSDAKSKARKMYTLTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKI 708
NP +S+ +AK A +Y TKG+ + KI
Sbjct: 823 NPTLSEQEAKEAASNLYANTKGQ-------------------------------SKTSKI 851
Query: 709 FDKPQWYGGTESAMFNRLEEIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQ 768
F K W+GG+ES +FN+LE IA P TP L C ++ +L + + +K++ +RINW +Q
Sbjct: 852 F-KRFWFGGSESILFNKLENIANQEVPRTPVLGCGITSSLMKQNLNINKYLPSRINWAIQ 910
Query: 769 SGAVDFLHLMLVCMRWLVSR---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRA 825
S VD+LHL+ M +L+ + + R ISIHDEIR+LV +E+KY+ A+AL V+N+ TRA
Sbjct: 911 SSGVDYLHLLCCSMSYLIKKYGINARLCISIHDEIRFLVSEEDKYKAAMALQVSNIWTRA 970
Query: 826 FCIKKLDMTDIPLSISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDI 883
+++ + D+P + +FFS V+IDKVLRKE D DC TPSN + G + + ++L I
Sbjct: 971 MFCEQIGIDDLPQNCAFFSAVDIDKVLRKEVDMDCITPSNNIPIPHGESLTITDLLKI 1028
>gi|347840971|emb|CCD55543.1| similar to DNA polymerase gamma [Botryotinia fuckeliana]
Length = 1150
Score = 420 bits (1080), Expect = e-114, Method: Compositional matrix adjust.
Identities = 281/895 (31%), Positives = 417/895 (46%), Gaps = 217/895 (24%)
Query: 4 ESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLATF 63
E W SS+NSL +V K + +DK R+ F E E I L+ YCA D T
Sbjct: 343 ELWIGRSSVNSLRDVAKFHL-NVTIDKAARDAFGECDREGIMAKLDELLNYCAADVDITH 401
Query: 64 EVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLAG 123
+V + + FP F+E PHPV+ A
Sbjct: 402 KVYKRV--------------------------------------FPNFVETCPHPVSFAA 423
Query: 124 MLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDK-YKDSLWL 182
+ LS+ LP++ +W Y + T++ L+ ++ L+ D+A + D + +K+ WL
Sbjct: 424 LRHLSSVILPIDRSWESYVANAEATYHKLSDAVQERLLALKDKALEIKDDPELWKNDPWL 483
Query: 183 WDQDWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRRELVEKFKP 242
DWS++++K+ K K +P P
Sbjct: 484 KQLDWSIQEIKMVKGKTKN--------DP------------------------------P 505
Query: 243 LMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIPGPSL 302
+ ++P G P+WY+ L K + GP
Sbjct: 506 RPAKRQKMP-------GMPQWYKDLYPK--------------------------VSGPIN 532
Query: 303 ISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTDIKVPDAENIPLEQLKQLYNNIT 362
+S +I P LL + W PL + +GW + VP + +A N +Q+++
Sbjct: 533 LSVRTRIAPLLLRMAWDGYPLVWSEKYGWTFRVP------IEEAHNYKQKQMQE------ 580
Query: 363 KQDNCEANVDNAQNSLRDSVETNISFIDCSKSAKRLEVIANVLDKKKLAEASSTDTSTDD 422
C A + A +LRD DTS
Sbjct: 581 ----CNA-FEEADMALRD------------------------------------DTSA-- 597
Query: 423 ADTPREIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEISRMLSYWR 482
+ K+PHKDG G+P+++ ++ F L+ AK +E++ SYW
Sbjct: 598 -------AYFKIPHKDGPLAKCGSPMAKSYVQYFDKGILSSEYSYAKEALEMNASCSYWI 650
Query: 483 NNHERVKKQFVVWLNKKDLPRRLVENIESEGRDYGVILPQLIVSGTLTRRAVEATWMTAS 542
+ R++ Q V+ +KD + + G ILPQ+I GT+TRRAVE TW+TAS
Sbjct: 651 SARNRIQSQMTVY--EKDGAKG--PTTSQSKLETGYILPQIIPMGTVTRRAVENTWLTAS 706
Query: 543 NAVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSG 602
NA RVGSEL++MI+AP GY +GADVDS+ELWIAS++GD+ K HG +G+MTL G
Sbjct: 707 NAKPNRVGSELKSMIKAPPGYCFVGADVDSEELWIASLVGDAQF-KLHGGNAVGFMTLEG 765
Query: 603 QKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKAR 662
K+ TD+HS TA +GI+R AK+ NY RIYGAG +FA LL+QFNP +++++ A
Sbjct: 766 TKAAGTDLHSRTAGILGITRNDAKVFNYGRIYGAGLKFASTLLRQFNPSLTEAETSHTAG 825
Query: 663 KMYTLTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQWYGGTESAM 722
+Y TKG K TS ++ P W GGTES +
Sbjct: 826 NLYKATKGVK------------------------------TSRKILYPGPFWRGGTESFV 855
Query: 723 FNRLEEIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLVCM 782
FN+LEE A +P TP L ++ AL F+ +RINW +QS VD+LHL+++ M
Sbjct: 856 FNKLEEFAEQEKPRTPVLGAGITEALMACFVSKGGFMTSRINWAIQSSGVDYLHLLIISM 915
Query: 783 RWLV---SRDTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIPLS 839
+++ + + R I++HDEIRYLV DE++Y ALAL V+NL TRA +++ + D+P S
Sbjct: 916 DYIIRLYNINARLAITVHDEIRYLVKDEDRYRAALALQVSNLWTRAMFSQQMGINDLPQS 975
Query: 840 ISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKANGVI 894
++FS V+ID VLRKE D DC TPS+ IP GE +DI Q + + +
Sbjct: 976 CAYFSAVDIDHVLRKEVDMDCITPSH------DTPIPHGESIDIQQLLRQPTAYL 1024
>gi|296420113|ref|XP_002839625.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295635808|emb|CAZ83816.1| unnamed protein product [Tuber melanosporum]
Length = 1038
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 287/897 (31%), Positives = 420/897 (46%), Gaps = 217/897 (24%)
Query: 4 ESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLATF 63
E W SS+NSL +V K +C G LDK R F +LED+ N L++YCA+D +
Sbjct: 224 ELWIRRSSINSLRDVAKFHC-GIELDKEVRGRFGGTNLEDVLANLDELLSYCAQDAI--- 279
Query: 64 EVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLAG 123
AT V + + P FL PHPV+ A
Sbjct: 280 -----------------------------------ATHLVYRKVLPHFLRVCPHPVSFAA 304
Query: 124 MLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLL-HDDKYKDSLWL 182
+ LS+ LPVN +W Y E+ + + + ++K L++ + A + D Y + WL
Sbjct: 305 LRHLSSFILPVNRSWDTYVEETDKAYRQASDDVKKRLVELAETALEVKDKPDVYMNDQWL 364
Query: 183 WDQDWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRRELVEKFKP 242
DWS +++K F+K ++ VE KP
Sbjct: 365 RQLDWSGQEIK-----------------------------------FLKLKKGEVEP-KP 388
Query: 243 LMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIPGPSL 302
K ++P G P+WY+ L V G S +
Sbjct: 389 ---AKQKMP-------GMPKWYKDLFV------------------GDSQIN--------- 411
Query: 303 ISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTDIKVPDAENIPLEQLKQLYNNIT 362
+S +I+P LL L W PL + GW + + E+ +Q +
Sbjct: 412 LSARSRISPILLKLQWDKHPLVWTGKFGWTF--------------RVSREEAEQYKGS-- 455
Query: 363 KQDNCEANVDNAQNSLRDSVETNISFIDCSKSAKRLEVIANVLDKKKLAEASSTDTSTDD 422
++C S ++ E I N +D
Sbjct: 456 ------------------------PLVECDLSDEKNEAICNDIDGV-------------- 477
Query: 423 ADTPREIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEISRMLSYWR 482
+ KLPHKDG PL++ ++ F +L+ A+ +E++ SYW
Sbjct: 478 --------YFKLPHKDGPGSRCSTPLAKGYVQYFESQTLSSEYPLAREALEMNAACSYWI 529
Query: 483 NNHERVKKQFVVWLNKKDLPRRL--VENIESEGRDYGVILPQLIVSGTLTRRAVEATWMT 540
+ +R++ Q VV ++ + + VE E D G+ILPQLI GT+TRRAVE TW+T
Sbjct: 530 SARDRIRSQMVVQRSELEHTEGMEGVEKAEESLDDVGIILPQLIPMGTITRRAVERTWLT 589
Query: 541 ASNAVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTL 600
ASNA R+GSEL+A + AP GY+ +GADVDSQELWIAS++GD+ K HG LG+MTL
Sbjct: 590 ASNAKKHRLGSELKAKVIAPQGYAFVGADVDSQELWIASLLGDAQF-KIHGGNALGFMTL 648
Query: 601 SGQKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSK 660
G K+N TD+HS TA +GISR++AK+ NY RIYGAG FA LL+ FNP ++ +
Sbjct: 649 EGTKANGTDLHSKTANILGISRDNAKVFNYGRIYGAGVGFASTLLRAFNPAITDAKCAKI 708
Query: 661 ARKMYTLTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQWYGGTES 720
A +Y+ TKG + R + W+GGTES
Sbjct: 709 AADLYSKTKGHQTLR------------------------------KSLSPTRFWHGGTES 738
Query: 721 AMFNRLEEIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLV 780
+FN LE+ A +P TP L ++ AL + + F+ +RINW +QS VD+LHL++V
Sbjct: 739 FVFNTLEKFADQERPRTPVLGAGITEALMRRNLSRNGFLPSRINWAIQSSGVDYLHLLIV 798
Query: 781 CMRWLVSR---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIP 837
M +L+ + R I++HDEIRYLV E +Y+TA+AL V N+ TRA +++ + D+P
Sbjct: 799 AMDYLIRKFGLQARLAITVHDEIRYLVKHEHRYKTAMALQVANVWTRAMFSEQIGINDLP 858
Query: 838 LSISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKANGVI 894
S +FFS V+ID VLRKE D DC TP+NP I GE L+I++ + K N ++
Sbjct: 859 QSCAFFSAVDIDHVLRKEVDMDCITPTNP------TKINPGESLNIFELLKKENSLL 909
>gi|408395454|gb|EKJ74635.1| hypothetical protein FPSE_05181 [Fusarium pseudograminearum CS3096]
Length = 1138
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 290/893 (32%), Positives = 417/893 (46%), Gaps = 224/893 (25%)
Query: 6 WTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLATFEV 65
W SS+NSL +V K + + DKT RN F E + + L+TYCA D
Sbjct: 324 WVERSSVNSLRDVAKFHLNVSI-DKTIRNDFGELDRDGVVEKLDELLTYCAAD------- 375
Query: 66 IQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLAGML 125
V++ T V Q +FP FL+ PHPV+ A +
Sbjct: 376 ---------------VSI----------------THRVYQIVFPNFLKTCPHPVSFAALR 404
Query: 126 ELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHD-DKYKDSLWLWD 184
LS+ LPV+ +W Y + T++ L+ ++ L+ + A + D+Y++ W+
Sbjct: 405 HLSSVILPVDKSWDAYIKNAEATYHTLSDAVQERLIGLTESALEMKDSPDEYENDPWMQQ 464
Query: 185 QDWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRRELVEKFKPLM 244
DWS +++K+ K + +EP R + + KP
Sbjct: 465 LDWSGQEIKMAKG---------KGDEPP---------------------RPVARQKKP-- 492
Query: 245 QTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIPGPSLIS 304
G P+WY+ L S+D P I+
Sbjct: 493 --------------GMPKWYKDLF---QSSD-----------------------SPINIT 512
Query: 305 TSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTDIKVPDAENIPLEQLKQLYNNITKQ 364
++ P LL ++W+ PL + +GW + +VP AE T +
Sbjct: 513 VRTRVAPLLLKMSWEGYPLFWSDQYGWTF--------RVPRAEAA----------KYTAK 554
Query: 365 DNCEANVDNAQNSLRDSVETNISFIDCSKSAKRLEVIANVLDKKKLAEASSTDTSTDDAD 424
E D + LRD D A
Sbjct: 555 LAVECKFDEKEIKLRD----------------------------------------DHAH 574
Query: 425 TPREIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEISRMLSYWRNN 484
+ KLPHKDG NP+++ +++ F L+ AK +E++ SYW +
Sbjct: 575 -----AYFKLPHKDGPTARCTNPMAKGYLSYFESGMLSSEYTYAKEALEMNASCSYWISA 629
Query: 485 HERVKKQFVVWLNKKDLPRRLVENIESEGRDY----GVILPQLIVSGTLTRRAVEATWMT 540
+R+K Q VV+ KDL V + GR G ILPQ+I GT+TRRAVE TW+T
Sbjct: 630 RDRIKSQMVVY--DKDL---RVMRGSTRGRPKKDKPGFILPQIIPMGTITRRAVENTWLT 684
Query: 541 ASNAVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTL 600
ASNA RVGSEL+AM++AP GY +GADVDS+ELWIAS++GD+ K HG +G+MTL
Sbjct: 685 ASNAKKNRVGSELKAMVKAPRGYCFVGADVDSEELWIASLVGDA-TFKLHGGNAVGFMTL 743
Query: 601 SGQKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSK 660
G KS TD+HS TA +GI+R +AKI NY RIYGAG +FA LL+QFNP +S+
Sbjct: 744 EGTKSAGTDLHSRTASILGITRNNAKIFNYGRIYGAGLKFAATLLRQFNPNLSEKQTMET 803
Query: 661 ARKMYTLTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQWYGGTES 720
A ++Y TKG K T+ ++ +P W GGTES
Sbjct: 804 ASRLYANTKGTK------------------------------TNRKLLYKRPFWRGGTES 833
Query: 721 AMFNRLEEIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLV 780
+FN+LEE A + TP L ++ AL ++ +RINW +QS VD+LHL++V
Sbjct: 834 FVFNKLEEFAEQDKARTPVLGAGITEALMGRYISKGGYLTSRINWAIQSSGVDYLHLLVV 893
Query: 781 CMRWLVSR---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIP 837
M +L+ R D R I++HDEIRYLV +++KY TALAL V NL TRA +++ + D+P
Sbjct: 894 AMDYLIRRFNIDARVAITVHDEIRYLVTEKDKYRTALALQVANLWTRAMFSQQVGINDLP 953
Query: 838 LSISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKA 890
S ++FS V+ID VLRKE D +C TPS+ IP GE +DI ++K
Sbjct: 954 QSCAYFSAVDIDHVLRKEVDMECITPSH------QTPIPPGESIDINTLLEKG 1000
>gi|406866901|gb|EKD19940.1| DNA polymerase family A [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 1148
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 282/900 (31%), Positives = 418/900 (46%), Gaps = 225/900 (25%)
Query: 3 DESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLAT 62
+E W SS+NSL +V K + + +DK R+ F + E I L+ YCA D T
Sbjct: 327 EELWVGRSSVNSLRDVAKFHLD-VTIDKAQRDTFGQLDREGIRAKLDELLDYCAADVDVT 385
Query: 63 FEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLA 122
V + + FP FLE PHPV+ A
Sbjct: 386 HRVYRIV--------------------------------------FPNFLETCPHPVSFA 407
Query: 123 GMLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHD-DKYKDSLW 181
+ LS+ LPV+ +W Y + + T++ L+ ++ L+ ++A + D +K+ + W
Sbjct: 408 ALRHLSSVILPVDKSWESYISNAEATYHKLSDAVQERLIGLTEKALEIKADSEKWSNDPW 467
Query: 182 LWDQDWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRRELVEKFK 241
L DWS +++K+ K K +P
Sbjct: 468 LRQLDWSGQEIKMAKGKKKN--------DP------------------------------ 489
Query: 242 PLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIPGPS 301
P + ++P G P+WY KD SK + GP
Sbjct: 490 PRPAARQKMP-------GMPKWY-----------KDLFSKTD---------------GPI 516
Query: 302 LISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTDIKVPDAENIPLEQLKQLYNNI 361
+S +I P LL L W PL + +GW + V + DA Q+++
Sbjct: 517 GLSVRSRIAPLLLRLAWDGNPLVWSDKYGWTFRV------DITDAHKYTTSQMQE----- 565
Query: 362 TKQDNCEANVDNAQNSLRDSVETNISFIDCSKSAKRLEVIANVLDKKKLAEASSTDTSTD 421
C A D +LRD
Sbjct: 566 -----CTA-FDEKDMTLRDD---------------------------------------- 579
Query: 422 DADTPREIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEISRMLSYW 481
R+ + KLPHKDG NP+++ ++ F L+ AK +E++ SYW
Sbjct: 580 -----RDGAYFKLPHKDGPTARCANPMAKSYLPYFEKGVLSSEFTYAKEALEMNASCSYW 634
Query: 482 RNNHERVKKQFVVW----LNKKDLPRRLVENIESEGRDYGVILPQLIVSGTLTRRAVEAT 537
+ +R+ Q VV+ + + + EN G ILPQ+I GT+TRRAVE T
Sbjct: 635 ISARDRIMSQMVVYGEDGAKGPEQAKLMSEN--------GYILPQVIPMGTVTRRAVENT 686
Query: 538 WMTASNAVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGW 597
W+TASNA RVGSEL++M++AP GY +GADVDS+ELWIAS+IGD+ K HG +G+
Sbjct: 687 WLTASNAKKNRVGSELKSMVKAPSGYCFVGADVDSEELWIASLIGDAQF-KLHGGNAVGF 745
Query: 598 MTLSGQKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDA 657
MTL G K+ TD+HS TAK +GI+R AK+ NY RIYGAG +FA LL+QFNP +S+++
Sbjct: 746 MTLEGTKAAGTDLHSRTAKILGITRNDAKVFNYGRIYGAGLKFASTLLRQFNPGLSEAET 805
Query: 658 KSKARKMYTLTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQWYGG 717
A +Y TKG K R + L K+ + W GG
Sbjct: 806 TKVASNLYKATKGAKTNR------KALHKKTF------------------------WRGG 835
Query: 718 TESAMFNRLEEIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHL 777
TES +FN+LEE A +P TP L ++ AL + F+ +RINW +QS VD+LHL
Sbjct: 836 TESFVFNKLEEFAEQERPRTPVLGAGITEALMSRFVNQGGFMTSRINWAIQSSGVDYLHL 895
Query: 778 MLVCMRWLVSR---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMT 834
+++ M +L+ R D R I++HDEIRY+V +++KY A+AL V+N+ TR+ +++ +
Sbjct: 896 VIISMDYLIRRFNIDARLAITVHDEIRYIVSEQDKYRAAMALQVSNVWTRSMFSQQVGIN 955
Query: 835 DIPLSISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKANGVI 894
D+P + ++FS ++ID VLRKE D DC TPS+ IP GE +D+ + KAN +
Sbjct: 956 DLPQACAYFSAIDIDHVLRKEVDMDCITPSH------QTKIPHGESIDVTTLLTKANSFL 1009
>gi|403419134|emb|CCM05834.1| predicted protein [Fibroporia radiculosa]
Length = 1166
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 244/604 (40%), Positives = 332/604 (54%), Gaps = 114/604 (18%)
Query: 298 PGPSLISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTDIKVPDAENIPLEQLKQL 357
PG ++ +++P LL L+W+ PL R HGW + +VP N
Sbjct: 557 PGTLDLTVRSRVSPLLLRLSWQGWPLFHSREHGWAF--------RVPSDANF-------- 600
Query: 358 YNNITKQDNCEANVDNAQNSLRDSVETNISFIDCSKSAKRLEVIANVLDKKKLAEASSTD 417
++ T+++F + + S ++ N + K +
Sbjct: 601 ----------------------ETRATSLTFKEPADS-----LLHNAIQKGFV------- 626
Query: 418 TSTDDADTPREIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEISRM 477
F KLPHKDGE NVG+PL + FI D +L AK ++++
Sbjct: 627 -------------FYKLPHKDGEKANVGSPLGKTFIKFAQDGTLTSPGNEAKDALDMNAQ 673
Query: 478 LSYWRNNHERVKKQFVVWLNKK---DLPRRLVENIESEGRDYGVILPQLIVSGTLTRRAV 534
SYW + +RV KQ VVW +++ +PR + G+ +GVILPQ+I GT+TRRA+
Sbjct: 674 CSYWISARDRVLKQMVVWQDERVQIGVPRS-----QEPGKKWGVILPQVITMGTVTRRAI 728
Query: 535 EATWMTASNAVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATP 594
E TW+TASNA RVGSEL+AM++APDGYSI+GADVDS+ELWI+SV+GD+ HGAT
Sbjct: 729 EKTWLTASNAKANRVGSELKAMVRAPDGYSIVGADVDSEELWISSVMGDAQFGL-HGATA 787
Query: 595 LGWMTLSGQKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSK 654
+GWMTL G K+ TD+HS TA +GISR+ AK+ NY+RIYGAG R A LL Q N M
Sbjct: 788 IGWMTLEGTKAAGTDLHSKTASILGISRDQAKVFNYSRIYGAGMRHAVLLLLQSNAGMLP 847
Query: 655 SDAKSKARKMYTLTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQW 714
A+ A+ +Y TKGK NT +F + W
Sbjct: 848 EQAQKLAQNLYASTKGK------------------------------NTHRPDLFGRKFW 877
Query: 715 YGGTESAMFNRLEEIATSLQPVTPFLNCRLSRALEP---VSEDDSKFIQTRINWVVQSGA 771
YGGTES +FN+LEEIA S +P TP L C ++ AL + + ++ +RINWVVQS
Sbjct: 878 YGGTESLVFNKLEEIALSDRPQTPALGCGVTYALSKEYLPATFGADYMPSRINWVVQSSG 937
Query: 772 VDFLHLMLVCMRWLVSR---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCI 828
VD+LHL++V M L+ + R++IS+HDE+RYLV DE++Y LAL + NL TR+
Sbjct: 938 VDYLHLLIVAMDHLIKKYDIHARYLISVHDELRYLVKDEDRYRATLALQIANLWTRSLFA 997
Query: 829 KKLDMTDIPLSISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTID 888
KL M D+P ++FFS V+IDKVLRKE D C TPS P IP GE LDI Q +
Sbjct: 998 YKLGMDDLPQGVAFFSAVDIDKVLRKEVDMSCVTPSQP------VPIPPGECLDIAQVLA 1051
Query: 889 KANG 892
K NG
Sbjct: 1052 KTNG 1055
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 82/185 (44%), Gaps = 39/185 (21%)
Query: 6 WTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLATFEV 65
W +++S NSL++V KL+C+ +DK RN F+ + E+I + + YCA D V
Sbjct: 201 WEDITSANSLADVAKLHCDID-MDKGTRNDFLTSTPEEILEGIQDYLDYCASDV----GV 255
Query: 66 IQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLAGML 125
A+F L P FL P PV+ AG+L
Sbjct: 256 THAVFAKTL----------------------------------PSFLSACPSPVSFAGVL 281
Query: 126 ELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDKYKDSLWLWDQ 185
+ ++ L VN W Y + +T+ +L +K L D A ++ +K+K+ +WL
Sbjct: 282 TMGSSLLTVNEQWEAYLENAERTYKELEQGVKRRLHDLAHDAKEMMQSEKWKEDVWLSQL 341
Query: 186 DWSVK 190
DW+ K
Sbjct: 342 DWTPK 346
>gi|346971284|gb|EGY14736.1| DNA polymerase gamma [Verticillium dahliae VdLs.17]
Length = 1044
Score = 417 bits (1072), Expect = e-113, Method: Compositional matrix adjust.
Identities = 287/893 (32%), Positives = 410/893 (45%), Gaps = 215/893 (24%)
Query: 3 DESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLAT 62
+E W SS+NSL +V K + + +DK R+ F + L+ YCA D T
Sbjct: 231 EELWVERSSVNSLRDVAKFHLD-VTIDKAIRDDFSTLDRTGVLAKLDELLDYCAADVAIT 289
Query: 63 FEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLA 122
V Q +FP FLE PHPV+ A
Sbjct: 290 HRVY--------------------------------------QIVFPNFLETCPHPVSFA 311
Query: 123 GMLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLL-HDDKYKDSLW 181
+ LS+ LPVN W Y + T++ LN + L+ ++A ++ + + + W
Sbjct: 312 ALRHLSSVILPVNETWNAYIANAEATYHKLNDAVLERLLALAEKAVAIRDQSETWSNDPW 371
Query: 182 LWDQDWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRRELVEKFK 241
L DWS +++K+ K K +P R + K
Sbjct: 372 LNQLDWSGQEIKMVKGKKKN--------DPP---------------------RPAARQKK 402
Query: 242 PLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIPGPS 301
P G P WY+ L K DA P
Sbjct: 403 P----------------GMPRWYKDLFAK-----NDA---------------------PI 420
Query: 302 LISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTDIKVPDAENIPLEQLKQLYNNI 361
++ +I P LL L W PL + +GW + V +
Sbjct: 421 GLTVRTRIAPLLLRLAWDGHPLCWSDTYGWTFRVSRT----------------------- 457
Query: 362 TKQDNCEANVDNAQNSLRDSVETNISFIDCSKSAKRLEVIANVLDKKKLAEASSTDTSTD 421
A N L N I C + +++E +
Sbjct: 458 -----------EASNYL------NKQMIQCDMADEKVEALRQ------------------ 482
Query: 422 DADTPREIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEISRMLSYW 481
DT E + KLPHKDG NP+++ +++ F + +L+ AK +E++ SYW
Sbjct: 483 --DT--EGVYFKLPHKDGPTARCANPMAKSYLSYFENGTLSSEYSYAKEALEMNASCSYW 538
Query: 482 RNNHERVKKQFVVWLNKKDLPRRLVENIESEGRDYGVILPQLIVSGTLTRRAVEATWMTA 541
+ +R+K Q VV+ ++D+ +E G ILPQ+I GT+TRRAVE TW+TA
Sbjct: 539 ISARDRIKSQMVVY--EEDVANEEMEGGIKNKNTQGFILPQIIPMGTITRRAVENTWLTA 596
Query: 542 SNAVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLS 601
SNA RVGSEL+AM++AP GYS +GADVDSQELWIAS++GD+ K HG +G+MTL
Sbjct: 597 SNAKKNRVGSELKAMVKAPPGYSFVGADVDSQELWIASLVGDA-TFKLHGGNAIGFMTLE 655
Query: 602 GQKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKA 661
G K+ TD+HS TA +GI+R AK+ NY RIYGAG +FA +LL+QF+P +S+ + A
Sbjct: 656 GTKAAGTDLHSRTAGILGITRNDAKVFNYGRIYGAGLKFAAQLLRQFDPNLSEKETLETA 715
Query: 662 RKMYTLTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQWYGGTESA 721
K+Y TKG K R +V K +P W GGTES
Sbjct: 716 SKLYVNTKGTKTNR-----------KVLHK-------------------RPFWRGGTESF 745
Query: 722 MFNRLEEIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLVC 781
+FN+LEE A +P TP L ++ AL ++ +RINW +QS VD+LHL++V
Sbjct: 746 VFNKLEEFAEQERPRTPVLGAGITEALMGRFISKGGYLTSRINWAIQSSGVDYLHLLIVS 805
Query: 782 MRWLVSR---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIPL 838
M +L R D R I++HDEIRYLV D++KY A+AL V N+ TRA +++ + D+P
Sbjct: 806 MDYLTRRFNIDARLAITVHDEIRYLVKDDDKYRAAMALQVANVWTRAMFAQQVGINDLPQ 865
Query: 839 SISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKAN 891
S ++FS ++ID VLRKE D DC TPS+ IP GE LDI + K +
Sbjct: 866 SCAYFSAIDIDHVLRKEVDMDCITPSH------ATAIPHGESLDINALLAKGD 912
>gi|342877481|gb|EGU78933.1| hypothetical protein FOXB_10533 [Fusarium oxysporum Fo5176]
Length = 1139
Score = 417 bits (1071), Expect = e-113, Method: Compositional matrix adjust.
Identities = 284/888 (31%), Positives = 405/888 (45%), Gaps = 214/888 (24%)
Query: 3 DESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLAT 62
+E W SS+NSL +V K + + DK R+ F E E I L+ YCA D T
Sbjct: 320 EELWVERSSVNSLRDVAKFHLNVSI-DKALRDDFSELDREKILERLDQLLDYCAADVSVT 378
Query: 63 FEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLA 122
+ Q + P FLE PHPV+ A
Sbjct: 379 HRIYQIVL--------------------------------------PNFLETCPHPVSFA 400
Query: 123 GMLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLL-HDDKYKDSLW 181
+ LS+ LPV+ +W Y + T++ LN ++ L+ D+A + + Y + W
Sbjct: 401 ALRHLSSVILPVDKSWDAYITNAEATYHKLNDAVEERLISLTDKALDIKDKPEAYTNDPW 460
Query: 182 LWDQDWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRRELVEKFK 241
+ DWS +++K+ K K + P R + K
Sbjct: 461 MQQLDWSGQEIKMVKGKRK-------NDPP----------------------RPAARQKK 491
Query: 242 PLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIPGPS 301
P G P+WY+ L S D P
Sbjct: 492 P----------------GMPKWYKDLF---QSND-----------------------API 509
Query: 302 LISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTDIKVPDAENIPLEQLKQLYNNI 361
I+ +I P LL L W PL + +GW + V L+
Sbjct: 510 SITVRTRIAPLLLRLAWDGHPLFWSDKYGWTFRV------------------LRAEAPKY 551
Query: 362 TKQDNCEANVDNAQNSLRDSVETNISFIDCSKSAKRLEVIANVLDKKKLAEASSTDTSTD 421
T + E D + LRD T+ F
Sbjct: 552 TAKQMIECKFDEKEIHLRDD-HTHTYF--------------------------------- 577
Query: 422 DADTPREIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEISRMLSYW 481
KLPHKDG NP+++ ++ F L+ AK +E++ SYW
Sbjct: 578 -----------KLPHKDGPTARCVNPMAKGYLAYFESGVLSSEYSYAKEALEMNASCSYW 626
Query: 482 RNNHERVKKQFVVWLNKKDLPRRLVE----NIESEGRDYGVILPQLIVSGTLTRRAVEAT 537
+ +R+K Q VV+ ++DLP + ++ + E G ILPQ+I GT+TRRAVE T
Sbjct: 627 ISARDRIKSQMVVY--QEDLPHQGMQAETGHKGGEASANGFILPQIIPMGTITRRAVENT 684
Query: 538 WMTASNAVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGW 597
W+TASNA RVGSEL+AM++AP+GY +GADVDS+ELWIAS++GD+ K HG +G+
Sbjct: 685 WLTASNAKKNRVGSELKAMVKAPEGYCFVGADVDSEELWIASLVGDA-TFKLHGGNAVGF 743
Query: 598 MTLSGQKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDA 657
MTL G K+ TD+HS TA +GI+R AK+ NY RIYGAG +FA LL+QFNP +S+ +
Sbjct: 744 MTLEGTKAAGTDLHSRTASILGITRNDAKVFNYGRIYGAGLKFAATLLRQFNPNLSEKET 803
Query: 658 KSKARKMYTLTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQWYGG 717
A K+Y TKG K T+ ++ +P W GG
Sbjct: 804 LETASKLYANTKGTK------------------------------TNRKVLYKRPFWRGG 833
Query: 718 TESAMFNRLEEIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHL 777
TES +FN+LEE A + TP L ++ AL ++ +RINW +QS VD+LHL
Sbjct: 834 TESFVFNKLEEFAEQDKARTPVLGAGITEALMGRYISKGGYLTSRINWAIQSSGVDYLHL 893
Query: 778 MLVCMRWLVSR---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMT 834
++V M +L+ R D R I++HDEIRYLV D +KY TALAL V NL TRA +++ +
Sbjct: 894 LIVSMDYLIRRFNIDARLAITVHDEIRYLVKDTDKYRTALALQVANLWTRAMFSQQVGIE 953
Query: 835 DIPLSISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILD 882
D+P S ++FS V+ID VLRKE D +C TPS+P + G I + +L+
Sbjct: 954 DLPQSCAYFSAVDIDHVLRKEVDMECVTPSHPTPISPGESIDVSTLLE 1001
>gi|154299492|ref|XP_001550165.1| hypothetical protein BC1G_11008 [Botryotinia fuckeliana B05.10]
Length = 1122
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 276/882 (31%), Positives = 412/882 (46%), Gaps = 211/882 (23%)
Query: 4 ESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLATF 63
E W SS+NSL +V K + +DK R+ F E E I L+ YCA D T
Sbjct: 315 ELWIGRSSVNSLRDVAKFHL-NVTIDKAARDAFGECDREGIMAKLDELLNYCAADVDITH 373
Query: 64 EVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLAG 123
+V + + FP F+E PHPV+ A
Sbjct: 374 KVYKRV--------------------------------------FPNFVETCPHPVSFAA 395
Query: 124 MLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDK-YKDSLWL 182
+ LS+ LP++ +W Y + T++ L+ ++ L+ D+A + D + +K+ WL
Sbjct: 396 LRHLSSVILPIDRSWESYVANAEATYHKLSDAVQERLLALKDKALEIKDDPELWKNDPWL 455
Query: 183 WDQDWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRRELVEKFKP 242
DWS++++K+ K K +P P
Sbjct: 456 KQLDWSIQEIKMVKGKTKN--------DP------------------------------P 477
Query: 243 LMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIPGPSL 302
+ ++P G P+WY+ L K + GP
Sbjct: 478 RPAKRQKMP-------GMPQWYKDLYPK--------------------------VSGPIN 504
Query: 303 ISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTDIKVPDAENIPLEQLKQLYNNIT 362
+S +I P LL + W PL + +GW + VP + +A N +Q+++
Sbjct: 505 LSVRTRIAPLLLRMAWDGYPLVWSEKYGWTFRVP------IEEAHNYKQKQMQE------ 552
Query: 363 KQDNCEANVDNAQNSLRDSVETNISFIDCSKSAKRLEVIANVLDKKKLAEASSTDTSTDD 422
C A + A +LRD DTS
Sbjct: 553 ----CNA-FEEADMALRD------------------------------------DTSA-- 569
Query: 423 ADTPREIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEISRMLSYWR 482
+ K+PHKDG G+P+++ ++ F L+ AK +E++ SYW
Sbjct: 570 -------AYFKIPHKDGPLAKCGSPMAKSYVQYFDKGILSSEYSYAKEALEMNASCSYWI 622
Query: 483 NNHERVKKQFVVWLNKKDLPRRLVENIESEGRDYGVILPQLIVSGTLTRRAVEATWMTAS 542
+ R++ Q V+ +KD + + G ILPQ+I GT+TRRAVE TW+TAS
Sbjct: 623 SARNRIQSQMTVY--EKDGAKG--PTTSQSKLETGYILPQIIPMGTVTRRAVENTWLTAS 678
Query: 543 NAVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSG 602
NA RVGSEL++MI+AP GY +GADVDS+ELWIAS++GD+ K HG +G+MTL G
Sbjct: 679 NAKPNRVGSELKSMIKAPPGYCFVGADVDSEELWIASLVGDAQF-KLHGGNAVGFMTLEG 737
Query: 603 QKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKAR 662
K+ TD+HS TA +GI+R AK+ NY RIYGAG +FA LL+QFNP +++++ A
Sbjct: 738 TKAAGTDLHSRTAGILGITRNDAKVFNYGRIYGAGLKFASTLLRQFNPSLTEAETSHTAG 797
Query: 663 KMYTLTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQWYGGTESAM 722
+Y TKG K TS ++ P W GGTES +
Sbjct: 798 NLYKATKGVK------------------------------TSRKILYPGPFWRGGTESFV 827
Query: 723 FNRLEEIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLVCM 782
FN+LEE A +P TP L ++ AL F+ +RINW +QS VD+LHL+++ M
Sbjct: 828 FNKLEEFAEQEKPRTPVLGAGITEALMACFVSKGGFMTSRINWAIQSSGVDYLHLLIISM 887
Query: 783 RWLV---SRDTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIPLS 839
+++ + + R I++HDEIRYLV DE++Y ALAL V+NL TRA +++ + D+P S
Sbjct: 888 DYIIRLYNINARLAITVHDEIRYLVKDEDRYRAALALQVSNLWTRAMFSQQMGINDLPQS 947
Query: 840 ISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEIL 881
++FS V+ID V RKE D DC TPS+ + G I + ++L
Sbjct: 948 CAYFSAVDIDHVYRKEVDMDCITPSHDTPILHGESIDIQQLL 989
>gi|170086167|ref|XP_001874307.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164651859|gb|EDR16099.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 1064
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 231/507 (45%), Positives = 310/507 (61%), Gaps = 51/507 (10%)
Query: 398 LEVIANVLDKKKLAEASSTDTSTDD-ADTPREIGFI--KLPHKDGEHLNVGNPLSRDFIN 454
V +N K +L+ S D + D A+ GF+ KLPHKDGE NVG+PL + FI
Sbjct: 498 FRVPSNASFKTRLSPLSFYDPTDDKLAEATLSGGFVFYKLPHKDGEKANVGSPLGKSFIK 557
Query: 455 KFSDNSLAGVDIGAKRIIEISRMLSYWRNNHERVKKQFVVWL---NKKDLPRRLVENIES 511
D ++ AK ++++ + SYW + +R+ Q VVW NK LP+ + E
Sbjct: 558 FAQDGTMKSPGDEAKEALDMNALCSYWISARDRILNQMVVWQDAKNKLGLPK--FSSDED 615
Query: 512 EGRDYGVILPQLIVSGTLTRRAVEATWMTASNAVGERVGSELRAMIQAPDGYSIIGADVD 571
G+ +G+ILPQ+I GT+TRRA+E TW+TASNA RVGSEL+AM++AP+GY+I+GADVD
Sbjct: 616 NGKKWGIILPQVITMGTVTRRAIEKTWLTASNAKKNRVGSELKAMVRAPEGYAIVGADVD 675
Query: 572 SQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMHSITAKAVGISREHAKIINYA 631
S+ELWI+S +GD+ HGAT +GWMTL G K+ TD+HS TA +GISR+ AK+ NY+
Sbjct: 676 SEELWISSCMGDAQFGL-HGATAIGWMTLEGTKAAGTDLHSKTASILGISRDQAKVFNYS 734
Query: 632 RIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKGKKLYRLKDGHLEELIKRVYSK 691
RIYGAG R A LL Q N M A+ A +Y TKGK
Sbjct: 735 RIYGAGMRHAILLLLQSNASMLPEIAQKLAENLYASTKGK-------------------- 774
Query: 692 YEAREVCSAYNTSVDKIFDKPQWYGGTESAMFNRLEEIATSLQPVTPFLNCRLSRALEP- 750
NT IF++ W+GGTES +FN+LEEIA S +P TP L C ++ AL
Sbjct: 775 ----------NTHRTDIFERKFWFGGTESYLFNKLEEIALSDKPQTPALGCGVTYALSKE 824
Query: 751 --VSEDDSKFIQTRINWVVQSGAVDFLHLMLVCMRWLVSR---DTRFVISIHDEIRYLVP 805
+E S ++ +R+NWVVQS VD+LHL++V M L+S+ + R++IS+HDE+RYLV
Sbjct: 825 YLPAEFGSDYMPSRVNWVVQSSGVDYLHLLIVSMDHLISKYNINARYLISVHDELRYLVA 884
Query: 806 DEEKYETALALHVTNLLTRAFCIKKLDMTDIPLSISFFSGVEIDKVLRKESDNDCKTPSN 865
+E+KY TALAL + NL TR+ KL M D+P ++FFS V+IDKVLRKE D C TPS
Sbjct: 885 EEDKYRTALALQIANLWTRSLFAYKLGMDDLPQGVAFFSAVDIDKVLRKEVDMPCVTPSQ 944
Query: 866 PYGLCKGYGIPLGEILDIYQTIDKANG 892
P IP GE LDI+ + K NG
Sbjct: 945 P------IPIPPGESLDIFGVLAKTNG 965
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 80/348 (22%), Positives = 130/348 (37%), Gaps = 121/348 (34%)
Query: 6 WTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLATFEV 65
W +++S NSL++V KL+C G +DK R+ F+ + ++I NN + + YC+ D T +V
Sbjct: 272 WEDLTSANSLADVAKLHC-GIDMDKQTRSDFMTSTPKEILNNIADYLDYCSTDVSVTHQV 330
Query: 66 IQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLAGML 125
+TA LPD FL PHPV+ G+L
Sbjct: 331 -----------------------YATA-LPD--------------FLTACPHPVSFGGIL 352
Query: 126 ELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDK---YKDSL-- 180
+ +++L VN W Y + + + DL +++ L K + LL D K +KD
Sbjct: 353 TMGSSFLTVNEEWDAYLARAEKVYRDLEEGVQNKL-KKLAEDARLLMDGKKEEWKDDAES 411
Query: 181 -----WLWDQDWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRRE 235
WL DW+ + + + VK+ +
Sbjct: 412 VEKDPWLCQLDWTPDNARAR----------------------------------VKKAKM 437
Query: 236 LVEKFKPLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEA 295
K P++ +P+WY DA ++ + G +
Sbjct: 438 KASKPPPVL---------------WPKWYW-----------DATKPKKAMPSGTLE---- 467
Query: 296 WIPGPSLISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTDIKV 343
I+ +I P LL L+W PL R HGW + VP + K
Sbjct: 468 -------ITVRNRIAPILLRLSWFGWPLFHSREHGWTFRVPSNASFKT 508
>gi|357605859|gb|EHJ64806.1| hypothetical protein KGM_02867 [Danaus plexippus]
Length = 363
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 203/362 (56%), Positives = 259/362 (71%), Gaps = 18/362 (4%)
Query: 539 MTASNAVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDS--YCAKEHGATPLG 596
MTASNA +RVGSELR+M+ AP GY +GADVDSQELWIA+++GDS C G + G
Sbjct: 1 MTASNAQSDRVGSELRSMVTAPPGYRFVGADVDSQELWIAALLGDSSLMC----GGSAFG 56
Query: 597 WMTLSGQKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSD 656
W L+G K TD+HS+TA A G+ R+HAK+INYARIYGAG+ FAERLLKQFNP M+ S+
Sbjct: 57 WAVLAGDKRTNTDLHSLTAVAAGVRRDHAKVINYARIYGAGQNFAERLLKQFNPTMTISE 116
Query: 657 AKSKARKMYTLTKGKKLYRLKDGHLEELIKRV-------YSKYEAREVCSAYNTSVDKIF 709
AKSKA KM+T TKGK++YRLK+ +E + + Y+A + + D++F
Sbjct: 117 AKSKAAKMFTTTKGKRVYRLKEKFMEGFMDEESGDQTVEMTSYQAMRLAKLSGRTTDEMF 176
Query: 710 DKPQWYGGTESAMFNRLEEIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQS 769
++P+W GGTES MFN+LEEIA S P T FL RLSR+LE T++NWVVQS
Sbjct: 177 ERPRWEGGTESHMFNKLEEIAESSCPRTSFLEGRLSRSLEAAHNGGG----TKLNWVVQS 232
Query: 770 GAVDFLHLMLVCMRWLVSRDTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIK 829
A DFLHLMLV M L RF +S HDE+RYLVP+E KYE ALAL +TNLLTRAFC +
Sbjct: 233 AAADFLHLMLVSMTHL-QPSARFCLSFHDEVRYLVPEEHKYEAALALQITNLLTRAFCSQ 291
Query: 830 KLDMTDIPLSISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDK 889
++ + D+P+S++FFS VE+D+VLRKE++ DC TPSNP+GL KGYGIP GE L IY ++K
Sbjct: 292 RVGIHDLPMSVAFFSSVEVDRVLRKEANMDCVTPSNPHGLEKGYGIPNGESLTIYDVLEK 351
Query: 890 AN 891
+
Sbjct: 352 TD 353
>gi|440637300|gb|ELR07219.1| DNA polymerase gamma 1 [Geomyces destructans 20631-21]
Length = 1135
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 284/893 (31%), Positives = 413/893 (46%), Gaps = 218/893 (24%)
Query: 3 DESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLAT 62
+E W SS+NSL +V K + + +DK R+ F E I L+ YCA D
Sbjct: 328 EELWVGRSSVNSLRDVAKFHLD-VTIDKAQRDSFGELDRAGIRGKLDELLDYCAAD---- 382
Query: 63 FEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLA 122
V++ T V + +FP FL PHPV+ A
Sbjct: 383 ------------------VSI----------------THRVYKIVFPNFLATCPHPVSFA 408
Query: 123 GMLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDD-KYKDSLW 181
+ LS+ LPV+ +W Y + T+ L+ ++ L+ ++A + D+ K+ + W
Sbjct: 409 ALRHLSSVILPVDKSWESYIANAEATYLKLSDSVQERLIALTEKALEIKGDEEKWSNDPW 468
Query: 182 LWDQDWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRRELVEKFK 241
L DWS +++K+ K K +P
Sbjct: 469 LRQLDWSGQEIKMVKGKKKN--------DP------------------------------ 490
Query: 242 PLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIPGPS 301
P + ++P G P WY+ L K AD P
Sbjct: 491 PRPAARQKMP-------GMPAWYKGLFAK---AD-----------------------API 517
Query: 302 LISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTDIKVPDAENIPLEQLKQLYNNI 361
++ ++ P LL L W PL + +GW + +VP AE+ Q Y +
Sbjct: 518 NLTVRTRVAPLLLRLAWGGHPLFWSDKYGWTF--------RVPVAES-------QKYKEL 562
Query: 362 TKQDNCEANVDNAQNSLRDSVETNISFIDCSKSAKRLEVIANVLDKKKLAEASSTDTSTD 421
Q E D +LRD DT
Sbjct: 563 QMQRCTE--FDEKDIALRD------------------------------------DTGG- 583
Query: 422 DADTPREIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEISRMLSYW 481
F K+PHKDG NP+++ +++ F L+ AK +E++ SYW
Sbjct: 584 --------VFYKIPHKDGPTARCANPMAKSYMSYFEKGILSSEYSYAKEALEMNASCSYW 635
Query: 482 RNNHERVKKQFVVWLNKKDLPRRLVENIESEGRDYGVILPQLIVSGTLTRRAVEATWMTA 541
+ +R+ Q VV+ P + D G ILPQ+I GT+TRRAVE TW+TA
Sbjct: 636 ISARDRIMSQMVVYDADLQKPAK-----GQASNDTGYILPQVIPMGTVTRRAVENTWLTA 690
Query: 542 SNAVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLS 601
SNA RVGSEL++M++AP GY +GADVDS+ELWIAS++GD+ K HG LG+MTL
Sbjct: 691 SNAKANRVGSELKSMVKAPPGYCFVGADVDSEELWIASLVGDAQF-KLHGGNALGFMTLE 749
Query: 602 GQKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKA 661
G K+ TD+HS TA +GI+R AK+ NY RIYGAG +FA LL+QFNP +S+++ A
Sbjct: 750 GTKAAGTDLHSRTASILGITRNDAKVFNYGRIYGAGLKFASTLLRQFNPGLSEAETTKVA 809
Query: 662 RKMYTLTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQWYGGTESA 721
+Y TKG K T+ + +P W GGTES
Sbjct: 810 TALYKETKGAK------------------------------TNRKALHKRPFWRGGTESF 839
Query: 722 MFNRLEEIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLVC 781
+FN+LEE A +P TP L ++ AL + F+ +RINW +QS VD+LHL+++
Sbjct: 840 VFNKLEEFAEQERPRTPVLGAGITEALMSRFINKGGFMTSRINWAIQSSGVDYLHLLIIS 899
Query: 782 MRWLV---SRDTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIPL 838
M +L+ + D R I++HDEIRYLV +E+KY A+AL V+N+ TRA +++ + D+P
Sbjct: 900 MDYLIRLFNIDARLAITVHDEIRYLVREEDKYRAAMALQVSNVWTRAMFSQQMGINDLPQ 959
Query: 839 SISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKAN 891
S ++FS ++ID VLRKE D DC TPS+P IP GE +DI Q + K +
Sbjct: 960 SCAYFSAIDIDHVLRKEVDMDCITPSHP------TKIPHGESMDIMQLLAKGS 1006
>gi|354543112|emb|CCE39830.1| hypothetical protein CPAR2_602490 [Candida parapsilosis]
Length = 1369
Score = 414 bits (1064), Expect = e-112, Method: Compositional matrix adjust.
Identities = 287/905 (31%), Positives = 419/905 (46%), Gaps = 223/905 (24%)
Query: 1 MTDESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTL 60
+ ++ W S NSL+ V K +C G ++KT R F +I N++ LM YCA D
Sbjct: 322 IQEDPWLLTGSPNSLANVAKFHC-GIEMNKTAREYFASEDPREIVKNFNLLMNYCAHDVD 380
Query: 61 ATFEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVT 120
AT++ V + LFP F + PHPV+
Sbjct: 381 ATYK--------------------------------------VTKKLFPEFFTKVPHPVS 402
Query: 121 LAGMLELSTAYLPVNNNWVKYFN--ESCQTFN--DLNVEMKSL---LMDKCDQACSLLHD 173
A + L + LP + W Y E+C N ++N +K L L+ ++ S L
Sbjct: 403 FAALNHLGSLILPTSTKWKSYIESAEACYDANRAEVNDTLKKLALNLIQHIEKKDSKLAP 462
Query: 174 DKYKDSLWLWDQDWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRR 233
KY+ WL +W +K + KK + Y+ N
Sbjct: 463 -KYEKDPWLNQLNWKLKKGRFKKDGSP--------------YKRN--------------- 492
Query: 234 RELVEKFKPLMQTKDRLPVNSSYLIGYPEWYRKL--CVKPHSADKDAVSKQELIHDGISD 291
+YL GYPEWYR L V P + +
Sbjct: 493 ---------------------AYLTGYPEWYRDLWGSVAPAGSQMN-------------- 517
Query: 292 TSEAWIPGPSLISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTDIKVPDAENIPL 351
++ +ITP LL L W++ PL + GW + KVP E
Sbjct: 518 -----------LTLKTRITPLLLKLKWENFPLFWTDTEGWCF--------KVPFDE---- 554
Query: 352 EQLKQLYN-NITKQDNCEANVDNAQNSLRDSVETNISFIDCSKSAKRLEVIANVLDKKKL 410
+ L L++ N + +D + L + ++ + F
Sbjct: 555 DHLAYLFSKNYVRATLTPEEIDATHDKLHEDGKSYVLF---------------------- 592
Query: 411 AEASSTDTSTDDADTPREIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKR 470
K+PH DG + + LS++++ F D +L AK+
Sbjct: 593 ----------------------KVPHPDGPNKRCTSVLSKNYMRYFDDGTLTSEYDYAKK 630
Query: 471 IIEISRMLSYWRNNHERVKKQFVVWLNKKDLPRRLVENIE-SEGRDYGVILPQLIVSGTL 529
I++++ SYW N R+ QFVV+ NK+ + E E +D G+I+P L GT+
Sbjct: 631 ILKLNHEASYWTGNRNRIMDQFVVY-NKEGKNKFFDTKKECQEHKDMGIIIPNLASMGTI 689
Query: 530 TRRAVEATWMTASNAVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKE 589
TRRA E TW+TASNA R+GSEL+++I+AP GY IGADVDS+ELWIAS++GDS
Sbjct: 690 TRRATENTWLTASNAKKNRIGSELKSLIEAPKGYCFIGADVDSEELWIASLVGDSMFGI- 748
Query: 590 HGATPLGWMTLSGQKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFN 649
HG + LGWMTL G+KS TD+HS TA + ISR AK+ NY RIYGAG FA RLLKQFN
Sbjct: 749 HGGSALGWMTLEGEKSQGTDLHSKTASILDISRNDAKVFNYGRIYGAGITFATRLLKQFN 808
Query: 650 PEMSKSDAKSKARKMYTLTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIF 709
++S +A+ A+K+Y TKG S +
Sbjct: 809 SDLSDIEAEEIAQKLYASTKG------------------------------MTQSPRSLG 838
Query: 710 DKPQWYGGTESAMFNRLEEIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQS 769
K +YGG+ES MFN LE IA +P TP L ++ AL + + ++ +R+NW +QS
Sbjct: 839 SKKVYYGGSESVMFNALESIAQQPEPKTPVLGASITDALNSKNLKKNTYMTSRVNWTIQS 898
Query: 770 GAVDFLHLMLVCMRWLVSR---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAF 826
VD+LHL++V M +L+ + D R I++HDE+RYLV +++KY AL L ++N+ TRA
Sbjct: 899 SGVDYLHLLIVSMEYLIEKYGIDARLAITVHDELRYLVKEKDKYLAALLLQISNVWTRAM 958
Query: 827 CIKKLDMTDIPLSISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQT 886
++L + ++P S +FFS ++ID VLRKE DC TPS+P I GE L+I Q
Sbjct: 959 FCEQLGIKEVPQSCAFFSEIDIDHVLRKEVSMDCVTPSHP------DPIAPGESLNIKQL 1012
Query: 887 IDKAN 891
+D+ N
Sbjct: 1013 LDRTN 1017
>gi|46122277|ref|XP_385692.1| hypothetical protein FG05516.1 [Gibberella zeae PH-1]
Length = 1124
Score = 414 bits (1063), Expect = e-112, Method: Compositional matrix adjust.
Identities = 289/897 (32%), Positives = 415/897 (46%), Gaps = 220/897 (24%)
Query: 1 MTDES--WTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKD 58
M DE W SS+NSL +V K + + DKT RN F E + + L+TYCA D
Sbjct: 303 MHDEEDLWVERSSVNSLRDVAKFHLNVSI-DKTIRNDFGELDRDGVVEKLDELLTYCAAD 361
Query: 59 TLATFEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHP 118
V++ T V Q +FP FL+ PHP
Sbjct: 362 ----------------------VSI----------------THRVYQIVFPNFLKTCPHP 383
Query: 119 VTLAGMLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHD-DKYK 177
V+ A + LS+ LPV+ +W Y + T++ L+ ++ L+ + A + +Y+
Sbjct: 384 VSFAALRHLSSVILPVDKSWDAYIKNAEATYHTLSDAVQERLIGLTESALEMKDSPGEYE 443
Query: 178 DSLWLWDQDWSVKDLKLKK-KANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRREL 236
+ W+ DWS +++K+ K K N EP R +
Sbjct: 444 NDPWMQQLDWSGQEIKMAKGKGN----------EPP---------------------RPV 472
Query: 237 VEKFKPLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAW 296
+ KP G P+WY+ L S+D
Sbjct: 473 ARQKKP----------------GMPKWYKDLF---QSSD--------------------- 492
Query: 297 IPGPSLISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTDIKVPDAENIPLEQLKQ 356
P I+ ++ P LL ++W PL + +GW + +VP AE
Sbjct: 493 --SPINITVRTRVAPLLLKMSWDGYPLFWSNQYGWTF--------RVPRAEAA------- 535
Query: 357 LYNNITKQDNCEANVDNAQNSLRDSVETNISFIDCSKSAKRLEVIANVLDKKKLAEASST 416
T + E D + LRD
Sbjct: 536 ---KYTAKLAVECKFDEKEIKLRD------------------------------------ 556
Query: 417 DTSTDDADTPREIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEISR 476
D A + KLPHKDG NP+++ +++ F L+ AK +E++
Sbjct: 557 ----DHAH-----AYFKLPHKDGPTARCTNPMAKGYLSYFESGMLSSEYTYAKEALEMNA 607
Query: 477 MLSYWRNNHERVKKQFVVWLNKKDLPRRLVENIESEGRDYGVILPQLIVSGTLTRRAVEA 536
SYW + +R+K Q VV+ + R + + G ILPQ+I GT+TRRAVE
Sbjct: 608 SCSYWISARDRIKSQMVVYDQDLRVMRGSTRGKPKKDKP-GFILPQIIPMGTITRRAVEN 666
Query: 537 TWMTASNAVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLG 596
TW+TASNA RVGSEL+AM++AP GY +GADVDS+ELWIAS++GD+ K HG +G
Sbjct: 667 TWLTASNAKKNRVGSELKAMVKAPRGYCFVGADVDSEELWIASLVGDA-TFKLHGGNAVG 725
Query: 597 WMTLSGQKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSD 656
+MTL G KS TD+HS TA +GI+R +AKI NY RIYGAG +FA LL+QFNP +S+
Sbjct: 726 FMTLEGTKSAGTDLHSRTASILGITRNNAKIFNYGRIYGAGLKFAATLLRQFNPNLSEKQ 785
Query: 657 AKSKARKMYTLTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQWYG 716
A ++Y TKG K T+ ++ +P W G
Sbjct: 786 TMETASRLYANTKGTK------------------------------TNRKLLYKRPFWRG 815
Query: 717 GTESAMFNRLEEIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLH 776
GTES +FN+LEE A + TP L ++ AL ++ +RINW +QS VD+LH
Sbjct: 816 GTESFVFNKLEEFAEQDKARTPVLGAGITEALMGRYISKGGYLTSRINWAIQSSGVDYLH 875
Query: 777 LMLVCMRWLVSR---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDM 833
L++V M +L+ R D R I++HDEIRYLV +++KY TALAL V NL TRA +++ +
Sbjct: 876 LLVVAMDYLIRRFNIDARVAITVHDEIRYLVTEKDKYRTALALQVANLWTRAMFSQQVGI 935
Query: 834 TDIPLSISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKA 890
D+P S ++FS V+ID VLRKE D +C TPS+ IP GE +DI ++K
Sbjct: 936 NDLPQSCAYFSAVDIDHVLRKEVDMECITPSH------QTPIPPGESIDINTLLEKG 986
>gi|392588798|gb|EIW78129.1| alpha beta-hydrolase [Coniophora puteana RWD-64-598 SS2]
Length = 2653
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 241/612 (39%), Positives = 334/612 (54%), Gaps = 87/612 (14%)
Query: 297 IPGPSLISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTDIKVPDAENIPLEQLKQ 356
+PG I+ ++ P LL L+W PL R HGW + VP
Sbjct: 1344 LPGTLDITVRNRLAPLLLRLSWLGFPLFHSREHGWMFRVPTG------------------ 1385
Query: 357 LYNNITKQDNCEANVDNAQNSLRDSVETNISFIDCSKSAKRLEVIANVLDKKKLAEASST 416
A+ N ++ T + F D + + + +A S+
Sbjct: 1386 ------------ASAANGDGKGFETRLTPLEFFDPADEHLKAQTAPRFGGTGDATDAESS 1433
Query: 417 DTSTDDADTPREIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEISR 476
+ + A F KLPHKDGE NVG+PL++ F D +LA AK ++++
Sbjct: 1434 SSVANPAGG--RFRFYKLPHKDGEKANVGSPLAKTFGKYARDGTLASPWEAAKDALDMNA 1491
Query: 477 MLSYWRNNHERVKKQFVVWLNKKDL--------PRRLVENIESEGRDYGVILPQLIVSGT 528
SYW + +R+ Q VVW +KK E EG+ +G+ILPQ++ GT
Sbjct: 1492 RCSYWISARDRIINQMVVWDDKKTTMGFDSASPTSAAAEGATEEGQKWGMILPQVVAMGT 1551
Query: 529 LTRRAVEATWMTASNAVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAK 588
+TRRA+E TW+TASNA +RVGSEL+AM++AP GYSI+GADVDS+ELWI+S +GD+
Sbjct: 1552 VTRRAIEKTWLTASNAKKDRVGSELKAMVRAPPGYSIVGADVDSEELWISSCMGDAQFGL 1611
Query: 589 EHGATPLGWMTLSGQKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQF 648
HGAT LGWMTL G K+ TD+HS TA +GISR+ AK+ NY+RIYGAG R A L Q
Sbjct: 1612 -HGATALGWMTLEGTKAAGTDLHSKTASILGISRDQAKVFNYSRIYGAGMRHAVLSLLQA 1670
Query: 649 NPEMSKSDAKSKARKMYTLTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKI 708
N MS+ +A+ A +Y TKGK NT +
Sbjct: 1671 NAGMSQEEAQRLAENLYASTKGK------------------------------NTHRGDL 1700
Query: 709 FDKPQWYGGTESAMFNRLEEIATSLQPVTPFLNCRLSRAL--EPVSED-DSKFIQTRINW 765
F + W+GGTES +FN+LEEIA S +P TP L C ++ AL E + E ++ +RINW
Sbjct: 1701 FGRKFWFGGTESFVFNKLEEIALSERPTTPALGCGITHALSREYLPETFGGDYMTSRINW 1760
Query: 766 VVQSGAVDFLHLMLVCMRWLVSR---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLL 822
VVQS VD+LHL++V M +LV R+++S+HDE+RYLV D ++Y ALAL + N+
Sbjct: 1761 VVQSSGVDYLHLLIVAMDYLVRAYGIKARYLLSVHDELRYLVADRDRYRAALALQIANVW 1820
Query: 823 TRAFCIKKLDMTDIPLSISFFSGVEIDKVLRKESDNDCKTPS--NPYGLCKGYGIPLGEI 880
TR+ KL M D+P ++FFS V++D+VLRKE D C TPS +P IP GE
Sbjct: 1821 TRSLFAYKLGMDDLPQGVAFFSSVDVDRVLRKEVDMPCVTPSQLSP--------IPPGES 1872
Query: 881 LDIYQTIDKANG 892
L+I QT++K +G
Sbjct: 1873 LNIIQTLEKTHG 1884
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/333 (21%), Positives = 123/333 (36%), Gaps = 97/333 (29%)
Query: 6 WTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLATFEV 65
W +++S NSL++V KL+C G +DK R+ F+ + I + + YCA D T V
Sbjct: 969 WEDITSANSLADVAKLHC-GIAVDKELRSDFMTHAPAQIRADVRRYLGYCANDVGVTHAV 1027
Query: 66 IQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLAGML 125
+ P F +R P PV+ AG+L
Sbjct: 1028 YARVLPTFRQRCPSPVSFAGVL-------------------------------------- 1049
Query: 126 ELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLL----HDDKYKDSLW 181
+ +++L VN +W Y ++ + + +L +K L++ ++A L +++++ W
Sbjct: 1050 TMGSSFLTVNESWEAYIADAERAYRELERGIKKRLVELAEEARELFGREGEGERWREDPW 1109
Query: 182 LWDQDWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRRELVEKFK 241
L DW+ K + +S +E E VK R V + +
Sbjct: 1110 LAQLDWTPKVAGKSRGVGVVVS---------------------SEGESVKDLR--VSQSQ 1146
Query: 242 PLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIPGPS 301
P +K L ++ P WYR L GP
Sbjct: 1147 PDASSKGHLKTTTTT---QPRWYRDLLRS----------------------------GPF 1175
Query: 302 LISTSMQITPKLLSLTWKSMPLHFIRGHGWGYL 334
++ ++ P LL +T PL + + W YL
Sbjct: 1176 SPASVNRVIPYLLEMTLDGHPLIYTKDEKWHYL 1208
>gi|426201925|gb|EKV51848.1| hypothetical protein AGABI2DRAFT_114559 [Agaricus bisporus var.
bisporus H97]
Length = 1334
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 243/601 (40%), Positives = 321/601 (53%), Gaps = 109/601 (18%)
Query: 298 PGPSLISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTDIKVPDAENIPLEQLKQL 357
PG I+ +I P LL L+W PL + R HGW + V
Sbjct: 735 PGSLDITVRNRIAPLLLHLSWLGWPLFYSRQHGWIFRV---------------------- 772
Query: 358 YNNITKQDNCEANVDNAQNSLRDSVETNISFIDCSKSAKRLEVIANVLDKKKLAEASSTD 417
+ Q S R S +SF D D
Sbjct: 773 -------------TADGQYSTRSS---PLSFYD------------------------DAD 792
Query: 418 TSTDDADTPREIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEISRM 477
T+ D + F KLPHKDGE NVGNPLS+ FI D +L AK ++++
Sbjct: 793 TALADMASKEGCRFYKLPHKDGEKANVGNPLSKTFIKFSQDGTLRSPGDEAKEALDMNAQ 852
Query: 478 LSYWRNNHERVKKQFVVWL-NKKDLPRRLVENIESEGRDYGVILPQLIVSGTLTRRAVEA 536
SYW + +R+ Q VVW N DL +G G+I+PQ+I G +TRRA+E
Sbjct: 853 CSYWISARDRIMNQLVVWQDNSNDLG---FSASSPDGNKLGIIVPQVITMGAVTRRAIEK 909
Query: 537 TWMTASNAVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLG 596
TW+TASNA RVGSEL+AM++AP+GY+I+GADVDS+ELWI+S +GD+ HGAT LG
Sbjct: 910 TWLTASNAKKNRVGSELKAMVRAPEGYAIVGADVDSEELWISSCMGDAQFGL-HGATALG 968
Query: 597 WMTLSGQKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSD 656
WMTL G K+ TD+HS TA +GISR+ AK+ NY+RIYGAG+R A LL Q NP M+
Sbjct: 969 WMTLEGTKAAGTDLHSKTASILGISRDAAKVFNYSRIYGAGQRHALLLLLQSNPSMNAEQ 1028
Query: 657 AKSKARKMYTLTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQWYG 716
A+ A+ +Y TKGK NT F++ WYG
Sbjct: 1029 AQKLAQNLYASTKGK------------------------------NTHRTDFFNRKFWYG 1058
Query: 717 GTESAMFNRLEEIATSLQPVTPFLNCRLSRALEPVSEDD---SKFIQTRINWVVQSGAVD 773
G+ES +FN+LEEIA S P TP L C ++ AL + S ++ +RINW VQS VD
Sbjct: 1059 GSESFVFNKLEEIALSDNPRTPALGCGITHALSKKYLPETFGSDYMTSRINWAVQSSGVD 1118
Query: 774 FLHLMLVCMRWLVSR---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKK 830
+LHL++V M+ L+ R++IS+HDE+RYLV +++KY ALAL + NL TR+F K
Sbjct: 1119 YLHLLIVSMQHLIKEYDIQARYLISVHDELRYLVKEDDKYRAALALQIANLWTRSFFAYK 1178
Query: 831 LDMTDIPLSISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKA 890
L M D+P ++FFS V+ID VLRKE+D C TPS P IP GE LDI ++K
Sbjct: 1179 LGMDDLPQGVAFFSAVDIDHVLRKEADMPCVTPSQP------NPIPPGETLDIKHVLEKT 1232
Query: 891 N 891
N
Sbjct: 1233 N 1233
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 85/192 (44%), Gaps = 40/192 (20%)
Query: 3 DESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLAT 62
++ W ++S+NSL EV KL+C G +DK RN F+ + ++I++N H+ + YC+ D T
Sbjct: 386 EKRWEELTSVNSLREVAKLHC-GITMDKEIRNDFMTSTPQEIKDNIHDYLDYCSSDVDTT 444
Query: 63 FEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLA 122
V + P FL+ HPV+ AG LE
Sbjct: 445 HRVYAVVLPAFLQACSHPVSFAGALE---------------------------------- 470
Query: 123 GMLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHD-DKYKDSLW 181
+ +++L VN W +Y + + + +K L + + A L+ + +K++ W
Sbjct: 471 ----MGSSFLTVNQEWERYLERAEGVYRQMEEGVKQKLKELAENARPLMDEPEKWQQDPW 526
Query: 182 LWDQDWSVKDLK 193
DW+ K K
Sbjct: 527 FSQLDWTPKQAK 538
>gi|340515791|gb|EGR46043.1| DNA polymerase gamma [Trichoderma reesei QM6a]
Length = 1229
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 291/896 (32%), Positives = 415/896 (46%), Gaps = 222/896 (24%)
Query: 4 ESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLATF 63
E W SS+NSL +V K + +DK+ R+ F E S E++ L+ YCA D T
Sbjct: 413 EPWVEKSSINSLRDVAKFHLN-VTIDKSARDDFGELSREEVLEKLDELLEYCAADVSTTH 471
Query: 64 EVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLAG 123
+V + P FL HPV+ A + L
Sbjct: 472 QVYSIVLPNFLNVCQHPVSFAALRHL---------------------------------- 497
Query: 124 MLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDK--YKDSLW 181
S+ LPVN +W Y + T++ L+ ++ L ++A L D + +K+ W
Sbjct: 498 ----SSVILPVNESWNAYIANADATYHKLSASVEERLKGLAEKAAELNDDPEASWKNDPW 553
Query: 182 LWDQDWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRRELVEKFK 241
L DW+ K +++ K KR+ E
Sbjct: 554 LRQLDWTTKPIRMVKG---------------------------------KRKGE------ 574
Query: 242 PLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIPGPS 301
KDR P + + G P+WY+ L K +++
Sbjct: 575 -----KDR-PAANQKMPGKPKWYKDLFTK------------NVMN--------------- 601
Query: 302 LISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTDIKVPDAENIPLEQLKQLYNNI 361
++ +I P LL L W PL + +GW + + PD ++ + KQ+
Sbjct: 602 -LTVRTRIAPLLLRLAWDGHPLIWSNKYGWVFRI-------SPD--DVATYRAKQM---- 647
Query: 362 TKQDNCEANVDNAQNSLRDSVETNISFIDCSKSAKRLEVIANVLDKKKLAEASSTDTSTD 421
E D++ +LRD D S +L
Sbjct: 648 -----SEVVFDDSDPALRD---------DWGHSYFKL----------------------- 670
Query: 422 DADTPREIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEISRMLSYW 481
PHKDG NPL++ ++N F + +L+ AK +E++ SYW
Sbjct: 671 -------------PHKDGPTARCANPLAKGYLNYFENGTLSSEYEYAKEALEMNASCSYW 717
Query: 482 RNNHERVKKQFVVWLNKKDLPRR---LVENIESEGRDYGVILPQLIVSGTLTRRAVEATW 538
+ R+ Q VV + D+ + E E+ + G ILPQ+I GT+TRRAVE TW
Sbjct: 718 ISARGRIMSQMVV--TEHDVSAATAGITEAQEAPEKFQGFILPQVIPMGTITRRAVEKTW 775
Query: 539 MTASNAVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWM 598
+TASNA RVGSEL++MI+APDGY +GADVDS+ELWIAS++GD+ K HG +G+M
Sbjct: 776 LTASNAKKNRVGSELKSMIKAPDGYCFVGADVDSEELWIASLVGDA-TFKIHGGNAIGFM 834
Query: 599 TLSGQKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAK 658
TL G K+ TD+HS TA +GI+R AK+ NY RIYGAG +FA LLKQFNP++S S+
Sbjct: 835 TLEGTKAAGTDLHSRTAAILGINRNQAKVFNYGRIYGAGLKFAATLLKQFNPKLSDSETL 894
Query: 659 SKARKMYTLTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQWYGGT 718
A+K+Y TKG + TS I P W GGT
Sbjct: 895 EIAKKLYANTKGTR------------------------------TSRKTINKHPFWRGGT 924
Query: 719 ESAMFNRLEEIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLM 778
ES +FN+LE+ A TP L +++AL F+ +RINW +QS VD+LHL+
Sbjct: 925 ESFVFNKLEQFADQDWARTPVLAAGITQALMSRFVSKGSFLPSRINWAIQSSGVDYLHLL 984
Query: 779 LVCMRWLVSR---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTD 835
+V M +L+ R D R I++HDEIRYLV DE KY+TA+AL + NL TRA +++ + D
Sbjct: 985 IVSMDYLIRRYNLDARLAITVHDEIRYLVKDEHKYKTAMALQIANLWTRAMFAQQVGIDD 1044
Query: 836 IPLSISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKAN 891
+P S +FFS V+ID VLRKE D DC TPS+ IP GE LDI + K +
Sbjct: 1045 LPQSCAFFSAVDIDHVLRKEVDMDCITPSH------QTPIPHGESLDIQTLLSKGS 1094
>gi|50286981|ref|XP_445920.1| hypothetical protein [Candida glabrata CBS 138]
gi|49525226|emb|CAG58839.1| unnamed protein product [Candida glabrata]
Length = 1284
Score = 411 bits (1056), Expect = e-111, Method: Compositional matrix adjust.
Identities = 286/898 (31%), Positives = 429/898 (47%), Gaps = 219/898 (24%)
Query: 4 ESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLATF 63
+ W VS++N+LS+V +C G +DKT R+ F + +D+ + + L+ YCA D + T
Sbjct: 313 DPWLKVSTMNALSDVALFHC-GIKMDKTTRDYFASTNKQDVIDKFQLLVNYCATDVITTS 371
Query: 64 EVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLAG 123
+V + FP F+++ PHPV+ G
Sbjct: 372 KVFDKV--------------------------------------FPSFMKKCPHPVSFGG 393
Query: 124 MLELSTAYLPVNN-NWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDKYKDSLWL 182
+ LS+ LP + W Y S ++KY+DS +
Sbjct: 394 LKALSSCILPTDQIKWQNYIKNS---------------------------ENKYQDSKKV 426
Query: 183 WDQDWSVKDLKLKKKANKTLSVDQET---EEPEEFYEINKNGEDQTEDEFVKRRRELVEK 239
D +K + + QET ++ + F ++ K R+L +
Sbjct: 427 ID--------------DKIIEIVQETVKLKDQKGFQDVIKTNP---------WLRQLDWE 463
Query: 240 FKPLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIPG 299
KPL TK +PV + L GYPEWYR L EA +P
Sbjct: 464 IKPLRLTKKGVPVKNQKLPGYPEWYRSLF----------------------PNKEAELPQ 501
Query: 300 PSLISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTDIKVPDAENIPLEQLKQLYN 359
I+ +I P L+W+ P+ + GW ++ P S + + D +L +
Sbjct: 502 ---ITMRSRIIPLFFKLSWEDSPVIWTEDCGWCFIKPKSQEKQYKDKNY-------RLAD 551
Query: 360 NITKQDNCEANVDNAQNSLRDSVETNISFIDCSKSAKRLEVIANVLDKKKLAEASSTDTS 419
T +++ E V+ Q D I N L
Sbjct: 552 EATIKNHFEKLVEMGQYKKTD--------------------IGNDL-------------- 577
Query: 420 TDDADTPREIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEISRMLS 479
K+PH +G N LS+ +++ F L A ++++ S
Sbjct: 578 -----------LFKVPHPNGPDNNCTTLLSKPYVHFFEKGILKSESELASIALKMNASGS 626
Query: 480 YWRNNHERVKKQFVVWLNKKDLPRRLV-----ENIESEGRDYGVILPQLIVSGTLTRRAV 534
YW + ER+ QFVV K+D P + + ++++ +I+PQ+I GT+TRRAV
Sbjct: 627 YWMSARERIMSQFVV--PKEDFPEQFLPIKVGKDLKPTESSQAIIIPQIIPMGTVTRRAV 684
Query: 535 EATWMTASNAVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATP 594
E+TW+TASNA R+GSEL+A I AP+GYS +GADVDS+ELWIAS+ GDS + HG TP
Sbjct: 685 ESTWLTASNAKKNRIGSELKAQICAPEGYSFVGADVDSEELWIASLFGDS-VLRIHGGTP 743
Query: 595 LGWMTLSGQKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSK 654
+GWM L G K+ +D+H+ TA+ + R AKI NY RIYGAG +FA +LLK+FNP +S+
Sbjct: 744 IGWMCLEGTKAEGSDLHTKTAQILSCDRNEAKIFNYGRIYGAGVKFASQLLKKFNPTLSE 803
Query: 655 SDAKSKARKMYTLTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQW 714
+AK A K+Y TKGK T K+F K W
Sbjct: 804 KEAKETAVKLYESTKGK-------------------------------TKRSKVFKK-FW 831
Query: 715 YGGTESAMFNRLEEIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDF 774
YGG+ES +FN+LE IA P+TP L C ++ +L + + F+ +R+NW +QS VD+
Sbjct: 832 YGGSESILFNKLESIAEQDNPMTPVLGCGITNSLMKQNLKANSFLPSRVNWAIQSSGVDY 891
Query: 775 LHLMLVCMRWLVSR---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKL 831
LHL+ M +L+S + R +ISIHDEIRYLV D++KY+ ALAL ++NL TRA +++
Sbjct: 892 LHLLCCSMNYLISMYNIEARLIISIHDEIRYLVADKDKYKLALALQISNLWTRAMFAEQM 951
Query: 832 DMTDIPLSISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDK 889
+ ++P + +FFS ++IDKVLRKE D DC TPSN IP GE +DI + +++
Sbjct: 952 GIRELPQNCAFFSAIDIDKVLRKEVDLDCVTPSNE------IPIPFGESIDIVKLLER 1003
>gi|409083024|gb|EKM83381.1| hypothetical protein AGABI1DRAFT_123715 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 1334
Score = 410 bits (1055), Expect = e-111, Method: Compositional matrix adjust.
Identities = 242/601 (40%), Positives = 322/601 (53%), Gaps = 109/601 (18%)
Query: 298 PGPSLISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTDIKVPDAENIPLEQLKQL 357
PG I+ +I P LL L+W PL + R HGW + V
Sbjct: 735 PGSLDITVRNRIAPLLLHLSWLGWPLFYSRQHGWTFRV---------------------- 772
Query: 358 YNNITKQDNCEANVDNAQNSLRDSVETNISFIDCSKSAKRLEVIANVLDKKKLAEASSTD 417
+ Q S R S +SF D D
Sbjct: 773 -------------TSDGQYSTRSS---PLSFYD------------------------DAD 792
Query: 418 TSTDDADTPREIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEISRM 477
T+ D + F KLPHKDGE NVG+PLS+ FI D +L AK ++++
Sbjct: 793 TALADMASKEGCRFYKLPHKDGEKANVGSPLSKTFIKFSQDGTLRSPGDEAKEALDMNAQ 852
Query: 478 LSYWRNNHERVKKQFVVWL-NKKDLPRRLVENIESEGRDYGVILPQLIVSGTLTRRAVEA 536
SYW + +R+ Q VVW N DL +G G+I+PQ+I G +TRRA+E
Sbjct: 853 CSYWISARDRIMNQLVVWQDNSNDLG---FSASSLDGNKLGIIVPQVITMGAVTRRAIEK 909
Query: 537 TWMTASNAVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLG 596
TW+TASNA RVGSEL+AM++AP+GY+I+GADVDS+ELWI+S +GD+ HGAT LG
Sbjct: 910 TWLTASNAKKNRVGSELKAMVRAPEGYAIVGADVDSEELWISSCMGDAQFGL-HGATALG 968
Query: 597 WMTLSGQKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSD 656
WMTL G K+ TD+HS TA +GISR+ AK+ NY+RIYGAG+R A LL Q NP M+
Sbjct: 969 WMTLEGTKAAGTDLHSKTASILGISRDAAKVFNYSRIYGAGQRHALLLLLQSNPSMNAEQ 1028
Query: 657 AKSKARKMYTLTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQWYG 716
A+ A+ +Y TKGK NT F++ WYG
Sbjct: 1029 AQKLAQNLYASTKGK------------------------------NTHRTDFFNRKFWYG 1058
Query: 717 GTESAMFNRLEEIATSLQPVTPFLNCRLSRALEPVSEDD---SKFIQTRINWVVQSGAVD 773
G+ES +FN+LEEIA S P TP L C ++ AL + S ++ +RINW VQS VD
Sbjct: 1059 GSESFVFNKLEEIALSDNPRTPALGCGITHALSKKYLPETFGSDYMTSRINWAVQSSGVD 1118
Query: 774 FLHLMLVCMRWLVSR---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKK 830
+LHL++V M+ L+ + R++IS+HDE+RYLV +++KY ALAL + NL TR+F K
Sbjct: 1119 YLHLLIVSMQHLIKKYDIQARYLISVHDELRYLVKEDDKYRAALALQIANLWTRSFFAYK 1178
Query: 831 LDMTDIPLSISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKA 890
L M D+P ++FFS V+ID VLRKE+D C TPS P IP GE LDI ++K
Sbjct: 1179 LGMDDLPQGVAFFSAVDIDHVLRKEADMPCVTPSQP------NPIPPGETLDIKHVLEKT 1232
Query: 891 N 891
N
Sbjct: 1233 N 1233
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 85/192 (44%), Gaps = 40/192 (20%)
Query: 3 DESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLAT 62
++ W ++S+NSL EV KL+C G +DK RN F+ + ++I++N H+ + YC+ D T
Sbjct: 386 EKRWEELTSVNSLREVAKLHC-GITMDKEIRNDFMTSTPQEIKDNIHDYLDYCSSDVDTT 444
Query: 63 FEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLA 122
V + P FL+ HPV+ AG LE
Sbjct: 445 HRVYAVVLPAFLQACSHPVSFAGALE---------------------------------- 470
Query: 123 GMLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHD-DKYKDSLW 181
+ +++L VN W +Y + + + +K L + + A L+ + +K++ W
Sbjct: 471 ----MGSSFLTVNQEWERYLERAEGVYRQMEEGVKQKLKELAENARPLMDEPEKWQQDPW 526
Query: 182 LWDQDWSVKDLK 193
DW+ K K
Sbjct: 527 FSQLDWTPKQAK 538
>gi|260939924|ref|XP_002614262.1| hypothetical protein CLUG_05748 [Clavispora lusitaniae ATCC 42720]
gi|238852156|gb|EEQ41620.1| hypothetical protein CLUG_05748 [Clavispora lusitaniae ATCC 42720]
Length = 930
Score = 410 bits (1055), Expect = e-111, Method: Compositional matrix adjust.
Identities = 269/869 (30%), Positives = 397/869 (45%), Gaps = 210/869 (24%)
Query: 28 LDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLATFEVIQALFPLFLERFPHPVTLAGML 87
+DK R+ F ++ED+ +++ NLM YCA D AT
Sbjct: 1 MDKDLRDTFSSTNVEDVVSDFQNLMHYCASDVEAT------------------------- 35
Query: 88 ELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLAGMLELSTAYLPVNNNWVKYFNESCQ 147
F V Q L+P F + PHPV+ A + L + LP W Y + +
Sbjct: 36 -------------FAVAQKLYPQFRAKTPHPVSFAALKSLGSLVLPTTKKWNNYIESAEK 82
Query: 148 TFNDLNVEMKSLLMDKCDQACSLLHDDK------YKDSLWLWDQDWSVKDLKLKKKANKT 201
+++ + S+L ++ ++ + + Y+ WL +W++K +LK
Sbjct: 83 VYDENRNAVSSILKERANELIRFIEEQNDSLKPDYESDPWLKQLNWTLKAQRLK------ 136
Query: 202 LSVDQETEEPEEFYEINKNGEDQTEDEFVKRRRELVEKFKPLMQTKDRLP-VNSSYLIGY 260
KD P ++L GY
Sbjct: 137 ---------------------------------------------KDGSPYAKQAFLTGY 151
Query: 261 PEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIPGPSLISTSMQITPKLLSLTWKS 320
PEWYR L + ++ +S +ITP LL L W+
Sbjct: 152 PEWYRDLFKTSSETGQKEMN----------------------LSVRSRITPLLLRLKWEG 189
Query: 321 MPLHFIRGHGWGYLVPYSTDIKVPDAENIPLEQLKQLYNNITKQDNCEANVDNAQNSLRD 380
PL + GW + VP+ TD KV + L N TK E + ++ LRD
Sbjct: 190 NPLIWTESAGWCFKVPF-TDEKVDE----------MLSKNYTKAQLSEEDFESLLPELRD 238
Query: 381 SVETNISFIDCSKSAKRLEVIANVLDKKKLAEASSTDTSTDDADTPREIGFIKLPHKDGE 440
+ P E+ K+PH DG
Sbjct: 239 GYQ------------------------------------------PYEL--FKVPHPDGP 254
Query: 441 HLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEISRMLSYWRNNHERVKKQFVVWLNKKD 500
+S+ ++ F L AK I+ ++ SYW N R+ QFVV+ + K
Sbjct: 255 KKRCTLIMSKSYLRYFESGVLTSEYDYAKEILNLNATASYWMGNRARILDQFVVFADPKA 314
Query: 501 LPRRL--VENIESEGRDYGVILPQLIVSGTLTRRAVEATWMTASNAVGERVGSELRAMIQ 558
+ E +D G+ILP+L GT+TRRA E TW+TASN+ R+GSEL+++I+
Sbjct: 315 EKNNFFGTKKQSKEHKDMGIILPKLCTMGTITRRATENTWLTASNSKANRIGSELKSLIE 374
Query: 559 APDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMHSITAKAV 618
AP GY +GADVDS+ELWIAS+IGDS K HG T LGWMTL G K+ TD+HS TA +
Sbjct: 375 APKGYVFVGADVDSEELWIASLIGDSMF-KIHGGTALGWMTLEGDKNQKTDLHSKTADIM 433
Query: 619 GISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKGKKLYRLKD 678
GISR AK+ NY RIYGAG +FA RLLKQ N +S ++A+ A+++Y TKG
Sbjct: 434 GISRNDAKVFNYGRIYGAGVKFATRLLKQCNANLSDAEAERLAKELYEKTKGL------- 486
Query: 679 GHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQWYGGTESAMFNRLEEIATSLQPVTP 738
S KIF + ++GG+ES MFN LE IA P TP
Sbjct: 487 ------------------------ASHSKIFKRRVYHGGSESVMFNALEAIAYQEHPRTP 522
Query: 739 FLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLVCMRWLVSR---DTRFVIS 795
L ++ AL + + ++ +RINW +QS VD+LHL++V M +L+ + D R +I+
Sbjct: 523 VLGASITDALTQKYLNKNNYLTSRINWTIQSSGVDYLHLLIVSMDYLIEKFKLDARLMIT 582
Query: 796 IHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIPLSISFFSGVEIDKVLRKE 855
+HDE+RY+V +E++ AL L ++NL TRA ++L + ++P S +FFS V+ID VLRKE
Sbjct: 583 VHDEVRYMVKEEQRLMCALLLQISNLWTRAMFCEQLGIKELPQSCAFFSEVDIDFVLRKE 642
Query: 856 SDNDCKTPSNPYGLCKGYGIPLGEILDIY 884
+C TPS+P + G + ++LD +
Sbjct: 643 VGTECITPSHPDPIAPGESYDIIKLLDSF 671
>gi|365987219|ref|XP_003670441.1| hypothetical protein NDAI_0E03810 [Naumovozyma dairenensis CBS 421]
gi|343769211|emb|CCD25198.1| hypothetical protein NDAI_0E03810 [Naumovozyma dairenensis CBS 421]
Length = 1172
Score = 410 bits (1054), Expect = e-111, Method: Compositional matrix adjust.
Identities = 283/909 (31%), Positives = 418/909 (45%), Gaps = 229/909 (25%)
Query: 3 DESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLAT 62
++ W NVS++NSLS+V +C G +DK R+ F + N+ LMTYC+ D AT
Sbjct: 334 EDPWLNVSTMNSLSDVALFHC-GIKMDKEPRDYFASLDKTIVVENFQKLMTYCSDDVDAT 392
Query: 63 FEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLA 122
V + + FL++ PHPV+
Sbjct: 393 SRVFDKVLRM--------------------------------------FLKKCPHPVSFG 414
Query: 123 GMLELSTAYLPVNNN-WVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDKYKDSL- 180
+ LS+ LP W Y + + + + + +++ +++ ++ L DD K S
Sbjct: 415 ALRALSSFILPTTETAWNNYIQNAEELYQNSKLMIENKIIESIEELVK-LKDDSEKLSRV 473
Query: 181 -----WLWDQDWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRRE 235
WL DW++K +++ KK
Sbjct: 474 VPKDPWLRQLDWTMKPIRMTKKG------------------------------------- 496
Query: 236 LVEKFKPLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEA 295
+PV L GYPEWYR L A+KD+ + Q
Sbjct: 497 --------------VPVKGQKLPGYPEWYRSLF-----ANKDSKTPQ------------- 524
Query: 296 WIPGPSLISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTDIKVPDAENIPLEQLK 355
I+ + P L+W+ P+ + + GW + V
Sbjct: 525 -------ITIKSRSIPIFFKLSWEDHPVVWTKESGWCFPVH------------------- 558
Query: 356 QLYNNITKQDNCEANVDNAQNSLRDSVETNISFIDCSKSAKRLEVIANVLDKKKLAEASS 415
RD ET S + +IA D+ +A+
Sbjct: 559 -----------------------RDEFETFKS---------KNYIIA---DEDSIAQYRR 583
Query: 416 TDTSTDDADTPREIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEIS 475
S ++ T +I +K+PH +G N LS+ +I+ F L A + + ++
Sbjct: 584 DTNSINEDGTSDQI-LLKVPHPNGPAFNCTTLLSKPYIHFFEKGVLKSDSELAHQALNMN 642
Query: 476 RMLSYWRNNHERVKKQFVVWLNKKDLPRRLVENIESEGRD-------YGVILPQLIVSGT 528
SYW ER+K QFVV ++KD P + E S D +ILP +I GT
Sbjct: 643 SSGSYWMAARERIKSQFVV--SRKDFPDQFQELSSSSSVDAFNEQDNLAIILPTVIPMGT 700
Query: 529 LTRRAVEATWMTASNAVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAK 588
+TRRAVE TW+TASNA G R+GSEL+ +I+AP GY +GADVDS+ELWIAS++GDS
Sbjct: 701 VTRRAVENTWLTASNAKGNRIGSELKTLIKAPKGYCFVGADVDSEELWIASLVGDS-VFN 759
Query: 589 EHGATPLGWMTLSGQKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQF 648
HG T +GWM L G K+ TD+H+ TA+ +G SR AKI NY RIYGAG +FA +LLK+F
Sbjct: 760 IHGGTAIGWMCLEGTKNEGTDLHTKTAQILGCSRNEAKIFNYGRIYGAGVKFAGQLLKRF 819
Query: 649 NPEMSKSDAKSKARKMYTLTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKI 708
NP + +AK A K+Y TKGK T KI
Sbjct: 820 NPSLGDEEAKETAIKLYENTKGK-------------------------------TKRSKI 848
Query: 709 FDKPQWYGGTESAMFNRLEEIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQ 768
F K W+GG+ES +FN+LE IA + TP L C ++ +L + + F+ +RINW +Q
Sbjct: 849 FKK-FWFGGSESILFNKLESIAEQDEAKTPVLGCGITTSLMKRNLKSNSFLPSRINWAIQ 907
Query: 769 SGAVDFLHLMLVCMRWLVSR---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRA 825
S VD+LHL+ M +L+++ + R ISIHDEIRYL +++KY+ A+AL ++N+ TRA
Sbjct: 908 SSGVDYLHLLCCSMTYLIAKYNLNARLTISIHDEIRYLASEKDKYKVAMALQISNIWTRA 967
Query: 826 FCIKKLDMTDIPLSISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQ 885
+++ + D+P + +FFS V+ID V+RKE D DC TPSN IP GE LDI +
Sbjct: 968 IFCEQMGIDDLPQNCAFFSAVDIDHVMRKEVDMDCTTPSN------KVPIPHGENLDIIK 1021
Query: 886 TIDKANGVI 894
+ K ++
Sbjct: 1022 LLAKPESLL 1030
>gi|392561562|gb|EIW54743.1| gamma DNA-directed DNA polymerase [Trametes versicolor FP-101664 SS1]
Length = 1278
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 222/470 (47%), Positives = 295/470 (62%), Gaps = 49/470 (10%)
Query: 431 FIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEISRMLSYWRNNHERVKK 490
F KLPHKDGE NVG+PL++ F+ D +LA AK ++++ SYW + +RV
Sbjct: 741 FYKLPHKDGEKANVGSPLAKTFMKYSQDGTLASPFEEAKGALDMNAQCSYWISARDRVMN 800
Query: 491 QFVVWLNKK-DLPRRLVENIESEGRDYGVILPQLIVSGTLTRRAVEATWMTASNAVGERV 549
Q VVW + K D+ V G+ +GVILPQ+I GT+TRRA+E TW+TASNA RV
Sbjct: 801 QVVVWQDDKLDVG---VARPAEPGKKWGVILPQVITMGTVTRRAIEKTWLTASNAKKNRV 857
Query: 550 GSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATD 609
GSEL+AM++AP GY+++GADVDS+ELWI+SV+GD+ HGAT +GWMTL G K+ TD
Sbjct: 858 GSELKAMVRAPPGYALVGADVDSEELWISSVMGDAQFGL-HGATAIGWMTLEGTKAAGTD 916
Query: 610 MHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTK 669
+HS TA +GISR+ AK+ NY+RIYGAG R A LL Q N M A+ A +Y TK
Sbjct: 917 LHSKTASILGISRDQAKVFNYSRIYGAGMRHAVLLLLQSNAGMLPEQAQKLAENLYASTK 976
Query: 670 GKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQWYGGTESAMFNRLEEI 729
GK NT ++F + WYGGTES +FN+LEEI
Sbjct: 977 GK------------------------------NTHGTRLFGRKFWYGGTESFVFNKLEEI 1006
Query: 730 ATSLQPVTPFLNCRLSRALE----PVSEDDSKFIQTRINWVVQSGAVDFLHLMLVCMRWL 785
A S +P TP L C ++ AL PV S ++ +RINWVVQS VD+LHL++V M L
Sbjct: 1007 ALSDRPQTPALGCGITYALSKEYLPVGFG-SDYMPSRINWVVQSSGVDYLHLLIVSMEHL 1065
Query: 786 VSR---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIPLSISF 842
+++ R++IS+HDE+RYLV DE++Y ALAL + NL TR++ KL M D+P ++F
Sbjct: 1066 IAKYNIQARYLISVHDELRYLVKDEDRYRAALALQIANLWTRSYFAYKLGMDDLPQGVAF 1125
Query: 843 FSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKANG 892
FS V++D+VLRKE D C TPS P IP GE LDI QT++K +G
Sbjct: 1126 FSSVDVDRVLRKEVDMPCVTPSQP------VPIPAGESLDILQTLEKTHG 1169
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 89/190 (46%), Gaps = 39/190 (20%)
Query: 1 MTDESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTL 60
+T++ W +++S NSL++V +L+C+ +DK RN F+ + E+I + H + YC+ D
Sbjct: 315 ITEKRWEDLTSANSLADVAQLHCD-ITMDKEVRNDFMTSTPEEIRDGIHTYLDYCSTDVA 373
Query: 61 ATFEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVT 120
T V P FL P+PV+
Sbjct: 374 VTHAVFAKTL--------------------------------------PAFLTACPNPVS 395
Query: 121 LAGMLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDKYKDSL 180
AG+L + ++ L VN W KY + +T+ +L ++K L+D +A +L+ DK+KD
Sbjct: 396 FAGVLTMGSSLLTVNEEWDKYIANAERTYRELEEKVKMRLVDLAHEAKNLMEGDKWKDDA 455
Query: 181 WLWDQDWSVK 190
WL DW+ K
Sbjct: 456 WLSQLDWTPK 465
>gi|388582519|gb|EIM22823.1| hypothetical protein WALSEDRAFT_16207 [Wallemia sebi CBS 633.66]
Length = 1292
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 235/597 (39%), Positives = 333/597 (55%), Gaps = 108/597 (18%)
Query: 303 ISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTDIKVPDAENIPLEQLKQLYNNIT 362
+ST +++P LL L W + P+ R HGW Y +VP ++ I
Sbjct: 706 VSTRSKLSPILLKLRWLNYPVFSSRKHGWVY--------RVPRSDII------------- 744
Query: 363 KQDNCEANVDNAQNSLRDSVETNISFIDCSKSAKRLEVIANVLDKKKLAEASSTDTSTDD 422
N +++ R + +LA +D + +
Sbjct: 745 ----------NEKHTTR---------------------------QPELAFKHPSDATLSE 767
Query: 423 ADTPREIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEISRMLSYWR 482
A +E F K+PHKDGE NVGN LS+ FI+ L D A ++++ SYW
Sbjct: 768 AT--KEFAFYKIPHKDGEEYNVGNLLSKGFIHAMESGVLTSEDNTAHAAMDLNAQCSYWI 825
Query: 483 NNHERVKKQFVVWLNKKDLPRRLVENIESEGRDYGVILPQLIVSGTLTRRAVEATWMTAS 542
++ ERV KQF V+ D + + + G+ILP++I GT+TRRA+E TW+TAS
Sbjct: 826 SSRERVMKQFAVY----DGSDGVNMGLGGKQSKRGMILPEVIPMGTITRRAIEKTWLTAS 881
Query: 543 NAVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSG 602
NA RVGSEL+AM++AP GY+ +GADVDS+ELWI + +GD+ + GAT +GWMTL G
Sbjct: 882 NAKKNRVGSELKAMVRAPPGYAFVGADVDSEELWICATLGDAQFGVQ-GATAIGWMTLEG 940
Query: 603 QKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKAR 662
KS TD+HS++A +GISR+ AK+ NY+RIYGAG + A +LL Q NP +S+S+AK +A
Sbjct: 941 TKSAGTDLHSVSANILGISRDQAKVFNYSRIYGAGVKHAVQLLLQSNPSISESEAKQRAT 1000
Query: 663 KMYTLTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQWYGGTESAM 722
++Y TKGK ++ F K WYGGTES +
Sbjct: 1001 ELYAATKGK--------------------------------TIRDAFGKKFWYGGTESYV 1028
Query: 723 FNRLEEIATSLQPVTPFLNCRLSRAL--EPVSEDDSKFIQTRINWVVQSGAVDFLHLMLV 780
FN+LEEIA S QP TP L C ++ AL + + S F+ +R+NWVVQS VD+LH+++V
Sbjct: 1029 FNKLEEIALSDQPRTPTLGCEITAALSKKHLPASGSNFMTSRVNWVVQSSGVDYLHMLIV 1088
Query: 781 CMRWLVSR---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIP 837
M L+++ R++IS+HDE+R+LV +++KY ALAL + NL TRA KL M ++P
Sbjct: 1089 SMEHLINKYNIKARYLISVHDEVRFLVDEKDKYRLALALQIANLWTRAMFAFKLGMDNLP 1148
Query: 838 LSISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKANGVI 894
+S++FFSGV+ID+V RKE D DC TPSN IP GE DI + NG I
Sbjct: 1149 MSVAFFSGVDIDQVFRKEVDMDCVTPSN------TTAIPPGECYDIEALLKITNGTI 1199
Score = 93.6 bits (231), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 98/210 (46%), Gaps = 44/210 (20%)
Query: 3 DESWTNVSSLNSLSEVYKLYCEGKV-LDKTDRNIFVEGS--LEDIENNWHNLMTYCAKDT 59
+ W ++++ NSL+ VY+LY K LDK R F++ S E ++ NLM YCA D
Sbjct: 313 NSQWQDIATSNSLNNVYELYNPDKPRLDKQTREYFMDESSNAETLKPELQNLMQYCALDV 372
Query: 60 LATFEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPV 119
AT +V Q + P+FLER PHPV+ AGML
Sbjct: 373 QATHDVYQKVLPMFLERCPHPVSFAGML-------------------------------- 400
Query: 120 TLAGMLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDKYKDS 179
GM ++LP++ +W +Y + + +L + L + + A + L D +KD
Sbjct: 401 ---GM---GNSFLPIDQSWKEYIKSAEGKYKELTDNVHDNLGELAEMAKTKLDDGSWKDD 454
Query: 180 LWLWDQDWSVKDLKLKKKANKTLSVDQETE 209
+WL DW+ K ++A KT S +T+
Sbjct: 455 VWLSQLDWTPKR---ARRARKTTSKGNKTD 481
>gi|395324468|gb|EJF56908.1| gamma DNA-directed DNA polymerase [Dichomitus squalens LYAD-421 SS1]
Length = 1337
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 223/468 (47%), Positives = 295/468 (63%), Gaps = 45/468 (9%)
Query: 431 FIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEISRMLSYWRNNHERVKK 490
F KLPHKDGE NVG+PL + F+ D +LA AK ++++ SYW ++ +RV K
Sbjct: 793 FYKLPHKDGEDANVGSPLGKTFMKYAQDGTLASPFEEAKDALDMNAQCSYWISSRDRVTK 852
Query: 491 QFVVWLNKKDLPRRLVENIESEGRDYGVILPQLIVSGTLTRRAVEATWMTASNAVGERVG 550
Q VVW +L + +E E R +G+ILPQ+I GT+TRRA+E TW+TASNA R+G
Sbjct: 853 QMVVW-QADNLDIGVPRPVEPE-RKWGIILPQVITMGTVTRRAIEKTWLTASNAKQNRIG 910
Query: 551 SELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDM 610
SEL+AM++AP GY+I+GADVDS+ELWI+SV+GD+ HGAT LGWMTL G K+ TD+
Sbjct: 911 SELKAMVRAPPGYAIVGADVDSEELWISSVMGDAQFGL-HGATALGWMTLEGTKAAGTDL 969
Query: 611 HSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKG 670
HS TA +GISR+ AK+ NY+RIYGAG R A LL Q N M A+ AR +Y TKG
Sbjct: 970 HSKTASILGISRDQAKVFNYSRIYGAGMRHAVLLLLQGNAGMLPEKAEELARNLYASTKG 1029
Query: 671 KKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQWYGGTESAMFNRLEEIA 730
+K +Y T + FD+ WYGGTES +FN+LEEIA
Sbjct: 1030 QK---------------------------SYGT---RYFDRKFWYGGTESFVFNKLEEIA 1059
Query: 731 TSLQPVTPFLNCRLSRALEPV---SEDDSKFIQTRINWVVQSGAVDFLHLMLVCMRWLVS 787
S +P TP L C ++ AL E S F+ +RINWVVQS VD+LHL++V M L++
Sbjct: 1060 LSDRPRTPALGCGITHALSKSLLPDEFGSDFMTSRINWVVQSSGVDYLHLLIVSMEHLIA 1119
Query: 788 R---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIPLSISFFS 844
+ R++IS+HDE+RYLV +E++Y ALAL V NL TR+ KL + D+P ++FFS
Sbjct: 1120 KYNIQARYLISVHDELRYLVKEEDRYRAALALQVANLWTRSLFAFKLGLDDLPQGVAFFS 1179
Query: 845 GVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKANG 892
V+ID VLRKE D C TPS P IP GE +DI +T++K G
Sbjct: 1180 AVDIDHVLRKEVDMPCVTPSQP------NPIPPGESVDILKTLEKTRG 1221
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 86/187 (45%), Gaps = 39/187 (20%)
Query: 4 ESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLATF 63
E W + +SL+SL++V KL+C G +DK R+ F+ + E I + H + Y A D
Sbjct: 374 ERWEDKTSLSSLADVAKLHC-GIEVDKGARDDFLSETREAILEDIHTYLDYNATDV---- 428
Query: 64 EVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLAG 123
EV A+F L TA FL P PV+ AG
Sbjct: 429 EVTHAVFAKTL----------------TA------------------FLAACPSPVSFAG 454
Query: 124 MLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDKYKDSLWLW 183
+L + ++ L VN W Y + + + +L +K L++ QA +++ + K+K+ +WL
Sbjct: 455 ILTMGSSLLTVNEEWEAYLANAERAYKELEDRIKKRLIELAQQAKTMMENGKWKEDVWLA 514
Query: 184 DQDWSVK 190
DWS K
Sbjct: 515 QLDWSPK 521
Score = 40.0 bits (92), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 23/39 (58%)
Query: 298 PGPSLISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVP 336
PG ++ + P LL L+W+ PL + RGHGW + VP
Sbjct: 724 PGTLDLTVRNRYAPLLLRLSWQGWPLFYSRGHGWTFRVP 762
>gi|384494996|gb|EIE85487.1| hypothetical protein RO3G_10197 [Rhizopus delemar RA 99-880]
Length = 769
Score = 407 bits (1047), Expect = e-110, Method: Compositional matrix adjust.
Identities = 208/458 (45%), Positives = 295/458 (64%), Gaps = 45/458 (9%)
Query: 431 FIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEISRMLSYWRNNHERVKK 490
++K+PHKDG N GNPL++ +I F D L AK +E++ M +YW ++ ER+
Sbjct: 314 YLKVPHKDGADANCGNPLAKGYIGSFEDKILTSEYEAAKAALELNAMSAYWISSRERILN 373
Query: 491 QFVVWLNK----KDLPRRLVENIESEGRDYGVILPQLIVSGTLTRRAVEATWMTASNAVG 546
QFVVW + +LP++ E YG+ILPQ++ GT+TRRAVE TW+TASNA
Sbjct: 374 QFVVWDSNLCVDMNLPKK-------EKGKYGIILPQMVTMGTITRRAVERTWLTASNAKK 426
Query: 547 ERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSN 606
R+GSEL++M+QAP+GY I+GADVDS+ELWI+S+IGD+ HGAT LGWMTL G KS
Sbjct: 427 NRIGSELKSMVQAPEGYKIVGADVDSEELWISSIIGDAQFGF-HGATALGWMTLQGSKSE 485
Query: 607 ATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYT 666
TD+HS TA +GISR+ AKI NYARIYGAG ++A LL Q++ M + A+ +A ++Y+
Sbjct: 486 GTDLHSKTANILGISRDKAKIFNYARIYGAGVKYATSLLLQYSQGMDQQTAEKRAAELYS 545
Query: 667 LTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQWYGGTESAMFNRL 726
TKG+K + S + +F +P W+GG+ES MFN L
Sbjct: 546 NTKGEKEH-----------------------------SKNNVFKRPFWHGGSESYMFNAL 576
Query: 727 EEIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLVCMRWLV 786
E+IA S +P TP L C ++ AL+P S+F+ +R+NWVVQS VD+LHL++V M L+
Sbjct: 577 EDIALSKEPRTPVLGCSITDALKP-RYTGSQFLTSRVNWVVQSSGVDYLHLLIVSMGHLI 635
Query: 787 SR---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIPLSISFF 843
R D RF++S+HDE+RYL +++++ TALAL + N+ TRA KL + ++P S++FF
Sbjct: 636 KRYGIDARFMLSVHDEVRYLTTEKDQHRTALALQIANVWTRALFSYKLGIHNLPQSVAFF 695
Query: 844 SGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEIL 881
S V+ID VLRKE + C TPSN + +G L + +
Sbjct: 696 SAVDIDHVLRKEPNMPCLTPSNEERISEGISCNLQDTI 733
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 51/96 (53%), Gaps = 1/96 (1%)
Query: 105 QALFPLFLERFPHPVTLAGMLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKC 164
+++FP F + PHPV+ AGML + +++L V W Y ++S +L+ + L D
Sbjct: 148 KSVFPKFRKNCPHPVSFAGMLHMGSSFLTVTERWEDYLSKSSGKHKELSDMLDIKLRDLA 207
Query: 165 DQACSLLHD-DKYKDSLWLWDQDWSVKDLKLKKKAN 199
++A L++D + ++ WL DW V + K K
Sbjct: 208 EKARVLVNDPEVWQSDPWLSQLDWFVNPRQRKLKGQ 243
Score = 43.1 bits (100), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Query: 303 ISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTDIKVPDAENIPLEQLKQLYNNIT 362
IST +I P LL L W+ PLH + GW Y +P S + +++ L K Y +
Sbjct: 260 ISTRSRIAPILLRLKWQGYPLHHLSSFGWCYKIPNSEAAEDQIKKSV-LNDEKFYYLKVP 318
Query: 363 KQDNCEANVDN 373
+D +AN N
Sbjct: 319 HKDGADANCGN 329
>gi|449302476|gb|EMC98485.1| hypothetical protein BAUCODRAFT_32533 [Baudoinia compniacensis UAMH
10762]
Length = 1204
Score = 407 bits (1047), Expect = e-110, Method: Compositional matrix adjust.
Identities = 285/887 (32%), Positives = 407/887 (45%), Gaps = 222/887 (25%)
Query: 6 WTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLATFEV 65
W SS NSL +V K +C G +DK R F E + + LM YCA D T +V
Sbjct: 363 WVGRSSANSLRDVAKFHC-GITIDKAKREWFGELDRDGVVEKLDELMDYCAADVEVTHKV 421
Query: 66 IQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLAGML 125
+A+FP+FL+ PHPV+ A + L
Sbjct: 422 YKAVFPVFLDTCPHPVSFAALRHL------------------------------------ 445
Query: 126 ELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSL-LHDDKYKDSLWLWD 184
S+ LPVNN W Y + TF L+ ++ L + A + Y+ WL
Sbjct: 446 --SSEILPVNNGWEAYIANAEATFQRLSSAVEERLSSLAETALKQKASPNVYQKDPWLRQ 503
Query: 185 QDWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRRELVEKFKPLM 244
DW +++++ K K ++P R + KP
Sbjct: 504 LDWGGQEVRMVKGKKK--------DDPP---------------------RPAARQKKP-- 532
Query: 245 QTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIPGPSLIS 304
G P WY+ EL ++ S + ++
Sbjct: 533 --------------GMPNWYK-----------------ELFNNNDSSVN---------LT 552
Query: 305 TSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTDIKVPDAENIPLEQLKQLYNNITKQ 364
+I P LL L W PL + +GW + V +P E K +++T+
Sbjct: 553 VRTRIAPLLLKLAWDGHPLVWSDKYGWTFRV-------------LPGEAQKYRGSSMTEC 599
Query: 365 DNCEANVDNAQNSLRDSVETNISFIDCSKSAKRLEVIANVLDKKKLAEASSTDTSTDDAD 424
D E +N +I F KL A+
Sbjct: 600 DMNEEESPQLKNDF-----NHIYF--------------------KLPHANGPSAR---CA 631
Query: 425 TPREIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEISRMLSYWRNN 484
TP G+++ F + +L A+ +E++ SYW +
Sbjct: 632 TPLAKGYLQF---------------------FENGTLGSEYEYAREALEMNASCSYWISA 670
Query: 485 HERVKKQFVVWLNKKDLPRRLVENIESEGRDYGVILPQLIVSGTLTRRAVEATWMTASNA 544
+R++ Q VV+ ++D+P +E+ + G ILPQ+I GT+TRRAVE TW+TASNA
Sbjct: 671 RDRIRSQMVVY--EQDVP-----GVENGSDEQGFILPQVIPMGTITRRAVENTWLTASNA 723
Query: 545 VGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQK 604
RVGSEL++MI AP GY+ +GADVDSQELWIAS++GD+ K HG +G+MTL G K
Sbjct: 724 KKNRVGSELKSMITAPPGYAFVGADVDSQELWIASLVGDA-SFKLHGGNAIGFMTLEGNK 782
Query: 605 SNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKM 664
+ TD+HS TAK +GISR AK+ NY RIYGAG +FA+ LL++FNP +S+ A A+K+
Sbjct: 783 AAGTDLHSRTAKILGISRNDAKVFNYGRIYGAGLKFAQGLLRRFNPSLSEDQANDIAKKL 842
Query: 665 YTLTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIF-DKPQWYGGTESAMF 723
Y TKG K + KIF ++ WYGGTES +F
Sbjct: 843 YVETKGTK-------------------------------AGAKIFRERKFWYGGTESLVF 871
Query: 724 NRLEEIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLVCMR 783
NRLE+ A +P TP L ++ AL F+ +RINW +QS VD+LHL++V M
Sbjct: 872 NRLEDFAEQERPRTPVLGAGITEALMRRFLSKGGFLTSRINWAIQSSGVDYLHLLIVSME 931
Query: 784 WLVSR---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIPLSI 840
+L R + R +++HDEIRYL E+KY TA+AL V N+ TRA +++ + D+P S
Sbjct: 932 YLCRRYNINARLALTVHDEIRYLAKGEDKYRTAMALQVANVWTRAMFSQQMGIDDLPQSC 991
Query: 841 SFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTI 887
++FS V+ID VLRKE D DC TPS+P IP GE LDI Q +
Sbjct: 992 AYFSAVDIDHVLRKEVDMDCVTPSHP------NKIPPGESLDIVQIL 1032
>gi|71019835|ref|XP_760148.1| hypothetical protein UM04001.1 [Ustilago maydis 521]
gi|46099778|gb|EAK85011.1| hypothetical protein UM04001.1 [Ustilago maydis 521]
Length = 2098
Score = 404 bits (1037), Expect = e-109, Method: Compositional matrix adjust.
Identities = 243/622 (39%), Positives = 336/622 (54%), Gaps = 110/622 (17%)
Query: 309 ITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTDIKVPDAENIPLEQLKQLYNNITKQDNCE 368
I P LL ++W+ PL+ R HGW + S K+ +T+Q
Sbjct: 888 IAPILLKISWRGCPLYRSREHGWVFRHDPSDRHKL-----------------VTRQTPLA 930
Query: 369 --ANVDNAQNSLRDSVETNISFIDCSKSAKRLEVIANVLDKKKLAEASSTDTSTDDADT- 425
D L VE + +KS K ++A+A + + DA
Sbjct: 931 FGTTADGLLQHLAAPVE-----VRAAKS------------KTRIAKAKGSSKADKDAAAL 973
Query: 426 -PREIG---FIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGV---DIG---AKRIIEIS 475
+ G F K+PH +GE NVG+P ++ FI F D +L ++G A+ +E++
Sbjct: 974 VVKAYGTSIFYKVPHSEGESANVGSPFAKSFIAYFEDGTLESRHPDEVGRTAARTALELN 1033
Query: 476 RMLSYWRNNHERVKKQFVVWLNKKDLPRRLVENIESEGRDY--------GVILPQLIVSG 527
SYW +RV KQ VVW + D R +D G+ILPQ++ G
Sbjct: 1034 AQCSYWIAVRDRVHKQMVVWDGQADTTMRYPSGASGARQDKQGEADRKKGLILPQVVSMG 1093
Query: 528 TLTRRAVEATWMTASNAVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCA 587
T+TRRA+E TW+TASNA RVGSEL+AM++AP GYS++GADVDS+ELWI SV+GD+
Sbjct: 1094 TVTRRAIENTWLTASNAKKNRVGSELKAMVKAPPGYSLVGADVDSEELWICSVMGDAQFG 1153
Query: 588 KEHGATPLGWMTLSGQKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQ 647
HGAT +GWMTL G K+ TD+HS TA +G SR AK+ NY+RIYGAG + A LL +
Sbjct: 1154 I-HGATAVGWMTLEGTKALGTDLHSKTASILGTSRNQAKVFNYSRIYGAGIKHATHLLLK 1212
Query: 648 FNPEMSKSDAKSKARKMYTLTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDK 707
NP +S +A KA+++Y TKG+ NT D+
Sbjct: 1213 ANPSVSNEEATQKAKELYMATKGQ------------------------------NTHTDE 1242
Query: 708 IFDKPQWYGGTESAMFNRLEEIATSLQPVTPFLNCRLSRALEP------------VSEDD 755
F W+GGTES +FN+LE IA S P TP L+C ++ AL +SE+
Sbjct: 1243 FFGAKFWFGGTESYVFNKLESIALSDNPKTPALDCGVTNALTKKFLGKVDFGNGRLSEE- 1301
Query: 756 SKFIQTRINWVVQSGAVDFLHLMLVCMRWLVSR---DTRFVISIHDEIRYLVPDEEKYET 812
++ +RINWVVQS VD+LHL++ M WL R D RF++S+HDE+RYLV D++ Y
Sbjct: 1302 --YMPSRINWVVQSSGVDYLHLLITAMEWLSKRYSIDARFMLSVHDEVRYLVKDQDTYRA 1359
Query: 813 ALALHVTNLLTRAFCIKKLDMTDIPLSISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKG 872
ALAL + N+ TRA KL M D+PL +FF+ V+IDKVLRKE+D+ C TPS+P
Sbjct: 1360 ALALQIANIWTRAMFAFKLQMDDLPLGCAFFAQVDIDKVLRKEADDPCVTPSHP------ 1413
Query: 873 YGIPLGEILDIYQTIDKANGVI 894
IP+G LDI Q + + GV+
Sbjct: 1414 EAIPVGVALDIEQILQQTKGVL 1435
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 91/211 (43%), Gaps = 52/211 (24%)
Query: 2 TDESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEG-SLEDIENNWHNLMTYCAKDTL 60
++ W +S NSL++V +L+ + K R++FV+G S E++ + +L++YCA D +
Sbjct: 490 SESQWLEETSKNSLADVARLHRIPIKVSKAARDVFVDGASREEVLQDVQHLLSYCASDVV 549
Query: 61 ATFEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVT 120
T E+ + +P F R PHP T+AG+ L +
Sbjct: 550 VTHEIFRRTWPDFAARCPHPATMAGVFGLGS----------------------------- 580
Query: 121 LAGMLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDKYKDSL 180
+LPV++ W+ Y + FN +N +++ L+D ++ L DD KD
Sbjct: 581 ---------TFLPVDDEWIDYQRRCDEQFNCINNQVQKCLVDLAEK----LRDDGTKDIP 627
Query: 181 WLWDQDWSVKDLKLKKKANKTLSVDQETEEP 211
W L K + L D E EP
Sbjct: 628 W---------SLAAKIAEQRRLLTDPEQHEP 649
>gi|449541287|gb|EMD32272.1| hypothetical protein CERSUDRAFT_162021 [Ceriporiopsis subvermispora
B]
Length = 1151
Score = 404 bits (1037), Expect = e-109, Method: Compositional matrix adjust.
Identities = 220/473 (46%), Positives = 292/473 (61%), Gaps = 47/473 (9%)
Query: 427 REIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEISRMLSYWRNNHE 486
R F KLPHKDGE NVGNPL++ F+ D +L AK ++++ SYW + +
Sbjct: 609 RGFVFYKLPHKDGEKANVGNPLAKTFMMYAEDGTLTSPFEEAKDALDMNAQCSYWISARD 668
Query: 487 RVKKQFVVWLNKK-DLPRRLVENIESEGRDYGVILPQLIVSGTLTRRAVEATWMTASNAV 545
RV KQ VVW + + D+ + E + +G+ILPQ+I GT+TRRA+E TW+TASNA
Sbjct: 669 RVVKQMVVWQDARLDIG---IPQPEDPAKKWGIILPQVITMGTVTRRAIEKTWLTASNAK 725
Query: 546 GERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKS 605
RVGSEL+AM++AP GY+I+GADVDS+ELWI+SV+GD+ HGAT +GWMTL G K+
Sbjct: 726 ANRVGSELKAMVRAPPGYAIVGADVDSEELWISSVMGDAQFGL-HGATAIGWMTLEGTKA 784
Query: 606 NATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMY 665
TD+HS TA +GISR AK+ NY+RIYGAG R A LL Q NP M A+ A +Y
Sbjct: 785 AGTDLHSKTASILGISRNQAKVFNYSRIYGAGMRHAVLLLLQSNPGMLPEQAQKLAENLY 844
Query: 666 TLTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQWYGGTESAMFNR 725
TKGK NT +F + WYGGTES +FN+
Sbjct: 845 ASTKGK------------------------------NTHRGDLFGRKFWYGGTESYVFNK 874
Query: 726 LEEIATSLQPVTPFLNCRLSRAL--EPVSED-DSKFIQTRINWVVQSGAVDFLHLMLVCM 782
LEEIA S +P TP L C ++ AL E + E S ++ +RINWVVQS VD+LHL++V M
Sbjct: 875 LEEIALSDRPQTPALGCGITYALSKEYLPEGFGSDYMPSRINWVVQSSGVDYLHLLIVAM 934
Query: 783 RWLVSR---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIPLS 839
+L+ + R++IS+HDE+RYLV +E++Y ALAL + NL TR+ KL M D+P
Sbjct: 935 DYLIQKYNIQARYLISVHDELRYLVKEEDQYRAALALQIANLWTRSLFSFKLGMDDLPQG 994
Query: 840 ISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKANG 892
++FFS V+ID VLRKE D C TPS P + GE LDI Q ++K +G
Sbjct: 995 VAFFSAVDIDHVLRKEVDMPCITPSQPNPIAP------GESLDILQVLEKTHG 1041
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 93/213 (43%), Gaps = 42/213 (19%)
Query: 1 MTDESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTL 60
+T + W +++S NSL++V KL+C G +DK RN F+E + E+I H+ + YCA D
Sbjct: 174 ITQKRWEDLTSANSLADVAKLHC-GIDVDKEIRNDFMECTREEIREGLHDYLQYCASDVA 232
Query: 61 ATFEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVT 120
T V P FL P PV+ AG
Sbjct: 233 VTHAVFTKTLPAFLASCPSPVSFAG----------------------------------- 257
Query: 121 LAGMLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDKYKDSL 180
+L + +A L VN W Y + +N+L +K L+D +A +L+ DK+KD
Sbjct: 258 ---VLTMGSALLTVNQEWETYIANAEAKYNELGDSIKKRLVDLALEARALMEGDKWKDDP 314
Query: 181 WLWDQDWSVKDLKLKKKANKTLSVDQETEEPEE 213
WL DW+ K+ K L V ++ P E
Sbjct: 315 WLSQMDWTP---KVAGKTRGILPVTSDSTPPPE 344
Score = 40.0 bits (92), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 23/39 (58%)
Query: 298 PGPSLISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVP 336
PG ++ + +P LL L+WK PL + R HGW + VP
Sbjct: 543 PGSLDVTVRNRTSPLLLRLSWKGFPLFYSREHGWTFRVP 581
>gi|409049962|gb|EKM59439.1| hypothetical protein PHACADRAFT_205649 [Phanerochaete carnosa
HHB-10118-sp]
Length = 1342
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 215/468 (45%), Positives = 288/468 (61%), Gaps = 47/468 (10%)
Query: 431 FIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEISRMLSYWRNNHERVKK 490
F KLPHKDGE NVG+PLS+ F+ D L AK ++++ SYW + +RV K
Sbjct: 803 FYKLPHKDGEKANVGSPLSKTFMKYAQDGILTSPGDEAKDALDLNAQCSYWISARDRVLK 862
Query: 491 QFVVWLNKKDLPRRLVENIESEGRDYGVILPQLIVSGTLTRRAVEATWMTASNAVGERVG 550
Q VVW + + + +G+I+PQ+I GT+TRRA+E TW+TASNA RVG
Sbjct: 863 QMVVWQDDE----HKMGFTPGPNEKWGIIIPQVITMGTVTRRAIEKTWLTASNAKKNRVG 918
Query: 551 SELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDM 610
SEL+AM++AP+GY+I+GADVDS+ELWI+SV+GD+ HGAT +GWMTL G K+ TD+
Sbjct: 919 SELKAMVRAPEGYAIVGADVDSEELWISSVMGDAQFGL-HGATAIGWMTLEGTKAAGTDL 977
Query: 611 HSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKG 670
HS TA +GISR+ AK+ NY+RIYGAG R A LL Q NP M +A+ A +Y TKG
Sbjct: 978 HSKTASILGISRDQAKVFNYSRIYGAGMRHAVLLLLQANPSMLPEEAQKLAENLYASTKG 1037
Query: 671 KKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQWYGGTESAMFNRLEEIA 730
K NT IF + W+GGTES +FN+LEEIA
Sbjct: 1038 K------------------------------NTHRADIFGRKFWFGGTESFVFNKLEEIA 1067
Query: 731 TSLQPVTPFLNCRLSRALEP---VSEDDSKFIQTRINWVVQSGAVDFLHLMLVCMRWLVS 787
S +P TP L C ++ AL +E S ++ +RINWVVQS VD+LHL++V M +L+
Sbjct: 1068 LSDKPQTPALGCGITYALSKEYLPAEFGSDYMTSRINWVVQSSGVDYLHLLIVSMEYLMK 1127
Query: 788 R---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIPLSISFFS 844
+ R++IS+HDE+RYLV +E+KY ALAL + NL TR +L + D+P + FFS
Sbjct: 1128 KYDIKARYLISVHDELRYLVKEEDKYRAALALQIANLWTRCLFALRLGLDDLPQGVGFFS 1187
Query: 845 GVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKANG 892
V+IDKVLRKE D C TPS+P + GE LD+ Q +DK +G
Sbjct: 1188 AVDIDKVLRKEVDMPCVTPSHPVPIAP------GESLDVVQVLDKTHG 1229
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 98/213 (46%), Gaps = 39/213 (18%)
Query: 1 MTDESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTL 60
++ + W +++S NSL++V KL+C +V DKT R+ F + EDI + + + YC+ D
Sbjct: 373 LSSKRWEDITSANSLADVAKLHCNIEV-DKTIRDDFGSRTREDILDGIQDYLHYCSSDVF 431
Query: 61 ATFEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVT 120
T V + P FL P PV+
Sbjct: 432 VTHAVYCKVL--------------------------------------PAFLTSCPSPVS 453
Query: 121 LAGMLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDKYKDSL 180
AG+L + +A L VN W +Y E+ +T+ +L ++KS L++ QA L+ +K+K+ +
Sbjct: 454 FAGILTMGSALLTVNQEWERYIEEAERTYRELEDKVKSRLVELAYQAKDLVDSEKWKEDV 513
Query: 181 WLWDQDWSVKDLKLKKKANKTLSVDQETEEPEE 213
WL DW+ K + D ++EP++
Sbjct: 514 WLNQLDWTPKIAGKSRGIGVPTGQDSSSQEPKQ 546
>gi|393233533|gb|EJD41104.1| hypothetical protein AURDEDRAFT_169883 [Auricularia delicata
TFB-10046 SS5]
Length = 1305
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 244/631 (38%), Positives = 335/631 (53%), Gaps = 112/631 (17%)
Query: 258 IGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIPGPSLISTSMQITPKLLSLT 317
I P WYR+L + + + DG + ++T + P LL L
Sbjct: 694 ISIPAWYRELLPRLEEGE----TPPPFDPDGFDELD---------LTTRSAVAPLLLKLG 740
Query: 318 WKSMPLHFIRGHGWGYLVPYSTDIKVPDAENIPLEQLKQLYNNITKQDNCEANVDNAQNS 377
W+ PL R HGW Y VP +VP AQ +
Sbjct: 741 WRGHPLFRSREHGWMYRVPRDKLHEVP-----------------------------AQET 771
Query: 378 LRDSVETNISFIDCSKSAKRLEVIANVLDKKKLAEASSTDTSTDDADTPREIGFIKLPHK 437
R+ K A +E + +L E F KLPHK
Sbjct: 772 AREF-----------KDAHDVEALGPMLG---------------------EYAFFKLPHK 799
Query: 438 DGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEISRMLSYWRNNHERVKKQFVVWLN 497
DGE NVGNPLS+ F+ D ++ + I+++ SYW + +RV +Q VVW +
Sbjct: 800 DGEEANVGNPLSKTFMKYAEDGTMTSPSATTRLAIDLNAQSSYWVSARDRVLQQLVVW-D 858
Query: 498 KKDLPRRLVENIESEGRDYGVILPQLIVSGTLTRRAVEATWMTASNAVGERVGSELRAMI 557
K+ L L N +EG +G+I+PQ+I GT+TRRA+E TW+TASNA R+GSEL+AM+
Sbjct: 859 KERLRMGLNTNKLTEGEKWGMIIPQVITMGTVTRRAIEKTWLTASNAKSNRIGSELKAMV 918
Query: 558 QAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMHSITAKA 617
+AP GY+I+GADVDS+ELWI+SV+GD+ HGAT +GWMTL G KS TD+HS TA
Sbjct: 919 RAPPGYAIVGADVDSEELWISSVMGDAQFGL-HGATAIGWMTLEGTKSAGTDLHSKTASI 977
Query: 618 VGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKGKKLYRLK 677
+GISR AK+ NY+RIYGAG + A LL Q NP MS A+ A ++Y TKG+
Sbjct: 978 LGISRNDAKVFNYSRIYGAGMKHASLLLLQSNPGMSLEKAQELATELYVKTKGR------ 1031
Query: 678 DGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQWYGGTESAMFNRLEEIATSLQPVT 737
NT IFD+ W+GG+ES +FN+LEEIA S +P T
Sbjct: 1032 ------------------------NTHRTDIFDRKFWFGGSESYVFNKLEEIAMSNRPQT 1067
Query: 738 PFLNCRLSRAL--EPVSED-DSKFIQTRINWVVQSGAVDFLHLMLVCMRWLVSR---DTR 791
P L C ++ AL E + + S ++ +RINWVVQS VD+LHL++V M +L+ R
Sbjct: 1068 PALGCGVTDALAKEYLPQTFGSDYLPSRINWVVQSSGVDYLHLLIVSMEYLLKTYDIKAR 1127
Query: 792 FVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIPLSISFFSGVEIDKV 851
++IS+HDE+RYLV +E+KY ALAL + NL TR +L M D+P ++FFS V++D +
Sbjct: 1128 YLISVHDELRYLVVEEDKYRCALALQIANLWTRCQFAWRLGMDDLPQGVAFFSAVDVDWL 1187
Query: 852 LRKESDNDCKTPSNPYGLCKGYGIPLGEILD 882
LRKE D C TPS L G + + IL+
Sbjct: 1188 LRKEVDMPCVTPSQLTPLAPGESLDMRGILE 1218
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 79/202 (39%), Gaps = 46/202 (22%)
Query: 3 DESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLAT 62
+ W ++S NSL++V L+C G + K R+ F+ S E+I N + YC D T
Sbjct: 343 ERRWEELTSANSLADVAMLHC-GITVRKAVRDDFLVASREEIAGNLDKYLGYCGTDVKTT 401
Query: 63 FEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLA 122
+ V +A+FP F+ P PV+ AG++
Sbjct: 402 YAVFRAVFPKFVAACPSPVSFAGVM----------------------------------- 426
Query: 123 GMLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLL-------HDDK 175
+ +A+L VN W Y + + +L +K L+ A L D
Sbjct: 427 ---SMGSAFLTVNQEWENYLQRAEAKYRELERAVKVSLLKLAKDAVQLSSFSPDPEKDPP 483
Query: 176 YKDSLWLWDQDWSVKDLKLKKK 197
+ +WL DW+ K L + +
Sbjct: 484 WAQDVWLSQLDWTPKQLTPRSR 505
>gi|358058136|dbj|GAA96022.1| hypothetical protein E5Q_02682 [Mixia osmundae IAM 14324]
Length = 1289
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 217/474 (45%), Positives = 289/474 (60%), Gaps = 53/474 (11%)
Query: 431 FIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEISRMLSYWRNNHERVKK 490
+ KLPHKDGE NVG+PLS+ F+ F L+ AK ++++ SYW + +R+ +
Sbjct: 761 YYKLPHKDGEDANVGSPLSKPFMPAFEQGILSSEYPVAKEALDMNAQCSYWVSARDRIVQ 820
Query: 491 QFVVWLNKKDLPRRLVENIESEGRDYGVILPQLIVSGTLTRRAVEATWMTASNAVGERVG 550
QFVVW + + S G+ILPQ++ GT+TRRAVE TW+ ASNA R+G
Sbjct: 821 QFVVWRDSD------TSSPTSADVRLGMILPQVVTMGTVTRRAVEKTWLAASNAKKNRLG 874
Query: 551 SELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDM 610
SEL+AM++AP GYSI+GADVDS+ELWI+SV+GD+ HGAT +GWMTL G KS TD+
Sbjct: 875 SELKAMVKAPPGYSIVGADVDSEELWISSVMGDAQFGV-HGATAIGWMTLEGTKSEGTDL 933
Query: 611 HSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKG 670
HS TA +GISR+ AK+ NY+RIYGAG R A +LL + NP +K A + A+++Y TKG
Sbjct: 934 HSKTASILGISRDDAKVFNYSRIYGAGVRHAVQLLTKSNPTQTKEAATALAKQLYVSTKG 993
Query: 671 KKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQWYGGTESAMFNRLEEIA 730
YR KD FD+ W+GGTES +FN+LEEIA
Sbjct: 994 INTYR-KDA-----------------------------FDRRFWFGGTESFLFNKLEEIA 1023
Query: 731 TSLQPVTPFLNCRLSRALEPV-------SEDDSKFIQTRINWVVQSGAVDFLHLMLVCMR 783
S P TP L C +++AL SE F+ +R+NW VQS VD+LHL++V M
Sbjct: 1024 MSDDPRTPALGCGVTKALSKSNLPKTAKSEAGEDFMPSRVNWAVQSSGVDYLHLLIVAME 1083
Query: 784 WLVSR---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIPLSI 840
+L R R++IS+HDEIRYLV DE+KY +LAL + NL TR+ KL+M D+P S
Sbjct: 1084 YLTRRFDIAARYMISVHDEIRYLVKDEDKYRASLALQIANLWTRSMFSYKLEMDDLPQSC 1143
Query: 841 SFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKANGVI 894
+FFS V++D V RKE + DC TPS P IP GE LDIY ++ N +
Sbjct: 1144 AFFSAVDVDHVFRKEVNMDCVTPSQP------VPIPSGESLDIYDSLRLTNRTL 1191
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 63/112 (56%), Gaps = 9/112 (8%)
Query: 3 DESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLAT 62
D +W +VSSL+SL++V KL+ G +DK R+ F S E + +++ LMTYCA D T
Sbjct: 293 DRAWQDVSSLSSLADVAKLHL-GLEVDKRPRDCFEHYSREQVVDHFQELMTYCATDVATT 351
Query: 63 FEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLER 114
V + P F + P+PV+ AGML + +LP + +P F+ER
Sbjct: 352 HRVYAIVLPAFRQTCPNPVSFAGMLNMGNPFLP--------VDQSWPEFIER 395
>gi|169614686|ref|XP_001800759.1| hypothetical protein SNOG_10490 [Phaeosphaeria nodorum SN15]
gi|160702800|gb|EAT81884.2| hypothetical protein SNOG_10490 [Phaeosphaeria nodorum SN15]
Length = 1130
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 270/855 (31%), Positives = 390/855 (45%), Gaps = 214/855 (25%)
Query: 3 DESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLAT 62
+E W S++NSL EV K +C +DK R F E I L+ YCA D
Sbjct: 319 EELWIGRSAVNSLREVAKFHCN-ITIDKQRREYFGELDRTGICEKLDELLDYCAAD---- 373
Query: 63 FEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLA 122
+E+ T V Q +FPLF+E PHPV+ A
Sbjct: 374 ------------------------VEI----------THRVYQKVFPLFIETCPHPVSFA 399
Query: 123 GMLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLL-HDDKYKDSLW 181
+ L+ LPVN W Y + + T+N LN ++ L+ D+A + + Y++ W
Sbjct: 400 ALRLLAAEILPVNETWDAYIHNAEATYNHLNTAVRERLVALTDKALEVKDQPEVYENDPW 459
Query: 182 LWDQDWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRRELVEKFK 241
L DWS +++K+ K K +P
Sbjct: 460 LSQLDWSGQEIKMVKGKKKN--------DP------------------------------ 481
Query: 242 PLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIPGPS 301
P + ++P G P+WY+ L K SD GP
Sbjct: 482 PRPAARQKMP-------GMPKWYKDLFTK-------------------SD-------GPM 508
Query: 302 LISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTDIKVPDAENIPLEQLKQLYNNI 361
++ +I P LL L+W PL + HGW Y +P++++ YN
Sbjct: 509 NLTVRTRIAPILLKLSWDGYPLVWSDKHGWTY--------------QVPMDEVFA-YN-- 551
Query: 362 TKQDNCEANVDNAQNSLRDSVETNISFIDCSKSAKRLEVIANVLDKKKLAEASSTDTSTD 421
+ L S E N+ D ++
Sbjct: 552 ----------ERGMKELDMSEEENLKLRDATQYV-------------------------- 575
Query: 422 DADTPREIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEISRMLSYW 481
+ K+PHKDG NPL++ ++ F L AK +E++ SYW
Sbjct: 576 ---------YYKIPHKDGPQARCANPLAKGYLQYFEKGKLTSEYAYAKEALEMNASCSYW 626
Query: 482 RNNHERVKKQFVVWLNK----KDLPRRLVENIESEGRDYGVILPQLIVSGTLTRRAVEAT 537
+ +R+ Q VV+ N+ DL E E++ G ILPQ+I GT+TRR+VE T
Sbjct: 627 ISARDRITSQMVVYNNEVPGASDLTSSSPEGPENK---VGFILPQIIPMGTVTRRSVENT 683
Query: 538 WMTASNAVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGW 597
W+TASNA RVGSEL++M++AP GY +GADVDS+ELWIAS++GD+ K HG +G+
Sbjct: 684 WLTASNAKKNRVGSELKSMVRAPKGYCFVGADVDSEELWIASLVGDA-TFKLHGGNAIGF 742
Query: 598 MTLSGQKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDA 657
MTL G K+ TD+HS TA +GISR AK+ NY RIYGAG +FA LL+QFNP +++S
Sbjct: 743 MTLEGTKAAGTDLHSRTAGILGISRNDAKVFNYGRIYGAGLKFASTLLRQFNPSLTESQT 802
Query: 658 KSKARKMYTLTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQWYGG 717
A +Y TKGKK T+ + ++P W GG
Sbjct: 803 SKTANDLYQDTKGKK------------------------------TNRKMLHERPFWRGG 832
Query: 718 TESAMFNRLEEIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHL 777
TES +FN+LE+ A +P TP L ++ AL+ F+ +RINW +QS VD+LHL
Sbjct: 833 TESFVFNKLEDFAEQERPRTPVLGAAITEALQRRYLSKGGFMTSRINWAIQSSGVDYLHL 892
Query: 778 MLVCMRWLVSR---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMT 834
+ V M +L R D R I++HDEIRYLV +KY A+AL V NL TRA +++ +
Sbjct: 893 LTVSMDYLTRRYNLDARLAITVHDEIRYLVKSADKYRAAMALQVANLWTRAMFSQQMGIN 952
Query: 835 DIPLSISFFSGVEID 849
++P S ++FS ++ID
Sbjct: 953 ELPQSCAYFSAIDID 967
>gi|302684645|ref|XP_003032003.1| hypothetical protein SCHCODRAFT_67730 [Schizophyllum commune H4-8]
gi|300105696|gb|EFI97100.1| hypothetical protein SCHCODRAFT_67730 [Schizophyllum commune H4-8]
Length = 1257
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 237/606 (39%), Positives = 331/606 (54%), Gaps = 113/606 (18%)
Query: 298 PGPSLISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTDIKVPDAENIPLEQLKQL 357
PG ++ ++ P L L+W PL R HGW Y +P QL+
Sbjct: 640 PGSMDLTVRNRLAPLLFRLSWLGHPLFHSREHGWVY--------------RVPTSQLE-- 683
Query: 358 YNNITKQDNCEANVDNAQNSLRDSVETNISFIDCSKSAKRLEVIANVLDKKKLAEASSTD 417
K+D + +SF D + LA+ +
Sbjct: 684 -----KEDGSRRKM--------------VSFYDPADDT--------------LAQMVALG 710
Query: 418 TSTDDADTPREIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEISRM 477
E F KLPHKDG+ NVG+PLS+ F++ S+ +L+ AK +E++ M
Sbjct: 711 ----------EYKFFKLPHKDGDSANVGSPLSKTFMSHASNGTLSSPFNEAKEALELNAM 760
Query: 478 LSYWRNNHERVKKQFVVWLN---KKDLPRRLVENIESEGRDYGVILPQLIVSGTLTRRAV 534
SYW ++ +R+ Q VVW + ++DL R G+ +GVI+PQ+I GT+TRRA+
Sbjct: 761 CSYWISSRDRIMNQMVVWQDPARQRDLGFRDAR----PGKQWGVIVPQVITMGTVTRRAI 816
Query: 535 EATWMTASNAVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATP 594
E TW+TASNA RVGSEL+AM++AP GY+I+GADVDS+ELWI+S +GD+ HGAT
Sbjct: 817 EKTWLTASNAKKNRVGSELKAMVRAPPGYAIVGADVDSEELWISSCMGDAQFGI-HGATA 875
Query: 595 LGWMTLSGQKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSK 654
LGWMTL G KS TD+HS TA +GISR+ AK+ NY+RIYGAG R A LL Q N M
Sbjct: 876 LGWMTLEGTKSAGTDLHSKTASILGISRDQAKVFNYSRIYGAGMRHAVLLLMQSNASMKH 935
Query: 655 SDAKSKARKMYTLTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQW 714
+A+ A +Y TKGK NT +F++ W
Sbjct: 936 EEAQKLAENLYASTKGK------------------------------NTHRTDLFERKFW 965
Query: 715 YGGTESAMFNRLEEIATSLQPVTPFLNCRLSRALEPVSED-----DSKFIQTRINWVVQS 769
+GG+ES +FN+LE IA S +P TP L C ++ AL V E S ++ +RINWVVQS
Sbjct: 966 FGGSESYVFNKLEAIALSDKPETPALGCGVTHAL--VKEYLPTGFGSDYMPSRINWVVQS 1023
Query: 770 GAVDFLHLMLVCMRWLVSR---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAF 826
VD+LH+++V M L+ + R++IS+HDE+RYLV ++++Y ALAL + N TR
Sbjct: 1024 SGVDYLHMLIVSMDHLIQKYDIKARYLISVHDELRYLVEEKDRYRAALALQIANCWTRCM 1083
Query: 827 CIKKLDMTDIPLSISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQT 886
KL M D+P ++FFS V++D VLRKE D C TPS P + IP GE L+I +
Sbjct: 1084 FAYKLGMDDLPQGVAFFSAVDVDHVLRKEVDMPCVTPSQP------HPIPPGESLNITKV 1137
Query: 887 IDKANG 892
++K +G
Sbjct: 1138 LEKTHG 1143
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 83/187 (44%), Gaps = 39/187 (20%)
Query: 4 ESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLATF 63
+SW +V+S NSL +V KL+C G + K R+ F+ + E I + + ++YCAKD + T
Sbjct: 295 KSWQDVTSANSLRDVAKLHC-GIEVSKEIRDDFMTSTRESILADVTDYLSYCAKDVVTTH 353
Query: 64 EVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLAG 123
V + P FLE PHPV+ AG+L
Sbjct: 354 AVYCKVLPGFLEACPHPVSFAGIL------------------------------------ 377
Query: 124 MLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDKYKDSLWLW 183
+ +A+L V++ W +Y + F + +K L D + A L+ +KD +WL
Sbjct: 378 --TMGSAFLTVDDGWKRYIQSAEGIFRKMEDGVKRKLHDMAENAKGLMESGAWKDDVWLS 435
Query: 184 DQDWSVK 190
DW K
Sbjct: 436 QLDWEPK 442
>gi|299755225|ref|XP_001828510.2| gamma DNA-directed DNA polymerase [Coprinopsis cinerea okayama7#130]
gi|298411126|gb|EAU93343.2| gamma DNA-directed DNA polymerase [Coprinopsis cinerea okayama7#130]
Length = 1341
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 214/471 (45%), Positives = 291/471 (61%), Gaps = 47/471 (9%)
Query: 431 FIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEISRMLSYWRNNHERVKK 490
F KLPHKDGE NVG+PL + FI D +L AK +++ + SYW + +R+
Sbjct: 790 FYKLPHKDGEKANVGSPLGKTFIKYAQDGTLKSPGDEAKEAFDLNAICSYWISARDRIMN 849
Query: 491 QFVVWLNKKD---LPRRLVENIESEGRDYGVILPQLIVSGTLTRRAVEATWMTASNAVGE 547
Q VVW ++ P+ E+ +S +G+I+PQ++ GT+TRRA+E TW+TASNA
Sbjct: 850 QMVVWEKQRGELGFPKP-AESPDSSKEKWGIIVPQVVTMGTVTRRAIEKTWLTASNAKKN 908
Query: 548 RVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNA 607
RVGSEL+AM++AP+GY+I+GADVDS+ELWI+S +GD+ HGAT +GWMTL G K+
Sbjct: 909 RVGSELKAMVRAPEGYAIVGADVDSEELWISSCMGDAQFGL-HGATAIGWMTLEGTKAAG 967
Query: 608 TDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTL 667
TD+HS TAK +GISR+ AK+ NY+RIYGAG R A LL Q + M A+ A +Y
Sbjct: 968 TDLHSKTAKILGISRDQAKVFNYSRIYGAGMRHAILLLLQGSSAMLPEAAQKLAENLYAS 1027
Query: 668 TKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQWYGGTESAMFNRLE 727
TKGK NT IF++ W+GG+ES +FN+LE
Sbjct: 1028 TKGK------------------------------NTHRTDIFERKFWFGGSESYLFNKLE 1057
Query: 728 EIATSLQPVTPFLNCRLSRALEP---VSEDDSKFIQTRINWVVQSGAVDFLHLMLVCMRW 784
EIA S +P TP L C ++ AL + S ++ +RINWVVQS VD+LHL++V M++
Sbjct: 1058 EIALSDKPQTPALGCGVTYALSKEYLPTGFGSDYLPSRINWVVQSSGVDYLHLLIVSMQY 1117
Query: 785 LVSR---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIPLSIS 841
L+ R + R++IS+HDE+RYLV D++KY ALAL + NL TR KL M D+P ++
Sbjct: 1118 LIQRYNINARYLISVHDELRYLVTDQDKYRLALALQIANLWTRCMFAYKLGMDDLPQGVA 1177
Query: 842 FFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKANG 892
FFS V++DKVLRKE C TPS P IP GE LDI ++K NG
Sbjct: 1178 FFSAVDVDKVLRKEVFMPCTTPSQP------DPIPSGESLDIAGVLEKTNG 1222
Score = 99.4 bits (246), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 92/188 (48%), Gaps = 39/188 (20%)
Query: 3 DESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLAT 62
++ W +++++NSL+EV KL+C G ++K R+ EG++E++ NN H+ + YC D T
Sbjct: 376 EKRWEDITAVNSLAEVAKLHC-GIEVNKDARDDLFEGNIEEVRNNLHDYLDYCCNDVHVT 434
Query: 63 FEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLA 122
EV + + P FL+ PHPV+ AG+L + +
Sbjct: 435 HEVYKKILPSFLQSCPHPVSFAGILTMGS------------------------------- 463
Query: 123 GMLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDKYKDSLWL 182
++LPVN W Y + +T+ D+ +++ L+ + A L+ ++ +K WL
Sbjct: 464 -------SFLPVNQEWEAYIERAEKTYRDMQAKVEKKLVSLAEDALKLMDNEAWKSDPWL 516
Query: 183 WDQDWSVK 190
DW+ K
Sbjct: 517 SQLDWTPK 524
Score = 44.7 bits (104), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 27/46 (58%)
Query: 298 PGPSLISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTDIKV 343
PG I+T +I P LL L+WK PL R HGW Y VP +TD +
Sbjct: 719 PGTLDITTRGRIAPLLLRLSWKDWPLTHSREHGWIYRVPPNTDAMI 764
>gi|353230107|emb|CCD76278.1| putative DNA polymerase gamma [Schistosoma mansoni]
Length = 870
Score = 397 bits (1020), Expect = e-107, Method: Compositional matrix adjust.
Identities = 203/487 (41%), Positives = 296/487 (60%), Gaps = 52/487 (10%)
Query: 431 FIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIG--------------------AKR 470
F LPH+ G L VG+PLSR F + + + L D A R
Sbjct: 407 FKHLPHESGTGLPVGSPLSRSFQSHIASHRLHSADFNPNDTISANTDTIKLKPVMGLADR 466
Query: 471 IIEISRMLSYWRNNHERVKKQFVVWLNKKDLPRRLVENIESEGR-DYGVILPQLIVSGTL 529
++ ++W++ +R+K Q +WL LP+ ++ + + +YG ILPQ+I GT+
Sbjct: 467 LLHDRVHATFWQSYSKRIKSQMAIWLPHDQLPKNVLNDQSYNCKANYGAILPQVITCGTV 526
Query: 530 TRRAVEATWMTASNAVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKE 589
+RRAVE W+TASNA R+GSE++AM+Q+P GY +GADVDSQE+WIA++IGD+ +
Sbjct: 527 SRRAVEPLWLTASNADENRLGSEIKAMVQSPPGYVFVGADVDSQEMWIAALIGDAGVGFQ 586
Query: 590 HGATPLGWMTLSGQKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFN 649
G+TP GWMTL G K + TD+H+ AK +GI R +K++NY+R+YG+G FA LL +F
Sbjct: 587 -GSTPYGWMTLQGNKLDGTDLHTKIAKEMGIKRSESKVLNYSRLYGSGIEFASHLLAKFC 645
Query: 650 PEMSKSDAKSKARKMYTLTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIF 709
++ A KA++++ +TKG+ R + ++ +
Sbjct: 646 -NITVKQASLKAKQLFQITKGR-----------------------RTIVDSFPSDDGTSI 681
Query: 710 DKPQWYGGTESAMFNRLEEIATSLQPVTPFLNCRLSRALEP-VSEDDSKFIQTRINWVVQ 768
+W GG+ESA+FN+LE IA S +P TPFLN +L+RAL P + +DD F+ +R+NWVVQ
Sbjct: 682 STSKWQGGSESAVFNQLESIARSPEPRTPFLNAQLTRALNPKLVKDD--FLPSRVNWVVQ 739
Query: 769 SGAVDFLHLMLVCMRWLVSR---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRA 825
S AVD+LH MLV MRWL+++ R ISIHDE+RY+ P Y+ ALAL ++NLLTR
Sbjct: 740 SSAVDYLHCMLVLMRWLINKFKIPARLCISIHDELRYICPKSHMYQVALALQISNLLTRT 799
Query: 826 FCIKKLDMTDIPLSISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQ 885
F + +L M D+P S++FFS VE+D +RKE+ +DC TPSN GL GYG+ G+ L +
Sbjct: 800 FFVYQLGMRDLPESVAFFSSVEVDTCIRKEAKDDCVTPSNSSGLQNGYGVSPGQSLTMQD 859
Query: 886 TIDKANG 892
+DK G
Sbjct: 860 ILDKTGG 866
Score = 111 bits (278), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/186 (33%), Positives = 95/186 (51%), Gaps = 49/186 (26%)
Query: 3 DESWTNVSSLNSLSEVYKLYCEGKV-LDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLA 61
D W + +SLNSL ++Y+LYC+ + DK R+IF G++ED+ N+ L YCA D L
Sbjct: 2 DLDWLSETSLNSLPDIYRLYCKKEPPQDKQLRSIFESGTIEDVRTNFQELFNYCAVDVLM 61
Query: 62 TFEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTL 121
T+E+IQ L+P+F ERFPHP T G+LE+S+ Y
Sbjct: 62 TYEIIQVLWPIFKERFPHPATFCGLLEMSSMY---------------------------- 93
Query: 122 AGMLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDKYKDSLW 181
LP+N+NW+K+ ++ ++ + + K LLM DQA + KY +S
Sbjct: 94 ----------LPINDNWIKFQEKAESSYTENILRQKKLLMQLADQALA-----KYSNS-- 136
Query: 182 LWDQDW 187
Q+W
Sbjct: 137 ---QEW 139
Score = 52.8 bits (125), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 47/101 (46%), Gaps = 23/101 (22%)
Query: 236 LVEKFKPLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEA 295
++ + K LMQ D+ S EWYR L KP + D+
Sbjct: 115 ILRQKKLLMQLADQALAKYS---NSQEWYRDLIPKPVKDNLDS----------------- 154
Query: 296 WIPGPSLISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVP 336
GP+L++ M+I PKLL L W+ +PLH+ + WG L+P
Sbjct: 155 ---GPALLTAQMRIAPKLLKLCWQGLPLHYDQVLKWGVLIP 192
>gi|443897589|dbj|GAC74929.1| mitochondrial DNA polymerase gamma, catalytic subunit [Pseudozyma
antarctica T-34]
Length = 1910
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 213/493 (43%), Positives = 294/493 (59%), Gaps = 69/493 (13%)
Query: 431 FIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGV---DIG---AKRIIEISRMLSYWRNN 484
F K+PH +GE NVG+P ++ FI F D +L ++G AK ++++ SYW
Sbjct: 970 FYKVPHSEGEEANVGSPFAKSFIAYFEDGTLQSQHPDEVGRAAAKTALDLNAQCSYWIAV 1029
Query: 485 HERVKKQFVVWLNKKDLPRRLVENIESE--------GRDYGVILPQLIVSGTLTRRAVEA 536
+RV KQ VVW + + E R G+ILPQ++ GT+TRRA+E
Sbjct: 1030 RDRVHKQMVVWNGQAGTAMKYPEGASGARQDKAGEAARRKGLILPQVVSMGTVTRRAIEN 1089
Query: 537 TWMTASNAVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLG 596
TW+TASNA RVGSEL+AM++AP GYS++GADVDS+ELWI SV+GD+ HGAT +G
Sbjct: 1090 TWLTASNAKKNRVGSELKAMVKAPPGYSLVGADVDSEELWICSVMGDAQFGI-HGATAVG 1148
Query: 597 WMTLSGQKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSD 656
WMTL G K+ TD+HS TA +G SR AK+ NY+RIYGAG + A LL + NP ++ D
Sbjct: 1149 WMTLEGTKALGTDLHSKTASILGTSRNQAKVFNYSRIYGAGIKHATHLLLKANPSVTNED 1208
Query: 657 AKSKARKMYTLTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQWYG 716
A KA+++Y TKG+ NT D++F W+G
Sbjct: 1209 ATQKAKELYMATKGQ------------------------------NTHSDELFGAKFWFG 1238
Query: 717 GTESAMFNRLEEIATSLQPVTPFLNCRLSRALEP------------VSEDDSKFIQTRIN 764
GTES +FN+LE IA S P TP L+C ++ AL +SE+ ++ +RIN
Sbjct: 1239 GTESFVFNKLESIALSDNPKTPALDCGVTTALTKKFLGKVDFGNGRMSEE---YMPSRIN 1295
Query: 765 WVVQSGAVDFLHLMLVCMRWLVSR---DTRFVISIHDEIRYLVPDEEKYETALALHVTNL 821
WVVQS VD+LHL++ M WL R D RF++S+HDE+RYLV DE++Y ALAL + N+
Sbjct: 1296 WVVQSSGVDYLHLLITAMEWLTKRYSIDARFMLSVHDEVRYLVKDEDRYRAALALQIANI 1355
Query: 822 LTRAFCIKKLDMTDIPLSISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEIL 881
TRA KL M D+PL +FF+ V+IDKVLRKE+D+ C TPS+P +P+G L
Sbjct: 1356 WTRAMFAFKLQMDDLPLGCAFFAQVDIDKVLRKEADDPCVTPSHP------DAVPVGVAL 1409
Query: 882 DIYQTIDKANGVI 894
DI + +++ G +
Sbjct: 1410 DIEKILEETKGSL 1422
Score = 76.6 bits (187), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 93/211 (44%), Gaps = 52/211 (24%)
Query: 2 TDESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEG-SLEDIENNWHNLMTYCAKDTL 60
++ W +S NSL++V +L+ + K+ RN+FV+G S ++I + +L++YCA D
Sbjct: 480 SESQWLEETSKNSLADVARLHRIPMKVSKSARNVFVDGASRQEILQDVQHLLSYCASDVT 539
Query: 61 ATFEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVT 120
T E+ + +P F+ R PHP T+AG+ L +
Sbjct: 540 VTHEIFRRTWPDFVARCPHPATMAGVFGLGS----------------------------- 570
Query: 121 LAGMLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDKYKDSL 180
+LPV++ W+ Y + + FN +N +++ L++ ++ L D+ +D
Sbjct: 571 ---------TFLPVDDEWIDYQHRCDEQFNRINDQVQKCLVELAEK----LRDEGTRDVP 617
Query: 181 WLWDQDWSVKDLKLKKKANKTLSVDQETEEP 211
W L K + + D E EP
Sbjct: 618 W---------SLAAKIAEERQMMTDPERLEP 639
>gi|256084395|ref|XP_002578415.1| DNA polymerase gamma [Schistosoma mansoni]
Length = 870
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 203/487 (41%), Positives = 296/487 (60%), Gaps = 52/487 (10%)
Query: 431 FIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIG--------------------AKR 470
F LPH+ G L VG+PLSR F + + + L D A R
Sbjct: 407 FKHLPHESGTGLPVGSPLSRSFQSHIASHRLHSADFNPNDTISANTDTIKLKPVMGLADR 466
Query: 471 IIEISRMLSYWRNNHERVKKQFVVWLNKKDLPRRLVENIESEGR-DYGVILPQLIVSGTL 529
++ ++W++ +R+K Q +WL LP+ ++ + + +YG ILPQ+I GT+
Sbjct: 467 LLHDRVHATFWQSYSKRIKSQMAIWLPHDQLPKNVLNDQSYNCKANYGAILPQVITCGTV 526
Query: 530 TRRAVEATWMTASNAVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKE 589
+RRAVE W+TASNA R+GSE++AM+Q+P GY +GADVDSQE+WIA++IGD+ +
Sbjct: 527 SRRAVEPLWLTASNADENRLGSEIKAMVQSPPGYVFVGADVDSQEMWIAALIGDAGVGFQ 586
Query: 590 HGATPLGWMTLSGQKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFN 649
G+TP GWMTL G K + TD+H+ AK +GI R +K++NY+R+YG+G FA LL +F
Sbjct: 587 -GSTPYGWMTLQGNKLDGTDLHTKIAKEMGIKRSESKVLNYSRLYGSGIEFASHLLAKFC 645
Query: 650 PEMSKSDAKSKARKMYTLTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIF 709
++ A KA++++ +TKG+ R + ++ +
Sbjct: 646 -NITVKQASLKAKQLFQITKGR-----------------------RTIVDSFPSDDGTSI 681
Query: 710 DKPQWYGGTESAMFNRLEEIATSLQPVTPFLNCRLSRALEP-VSEDDSKFIQTRINWVVQ 768
+W GG+ESA+FN+LE IA S +P TPFLN +L+RAL P + +DD F+ +R+NWVVQ
Sbjct: 682 STSKWQGGSESAVFNQLESIARSPEPRTPFLNAQLTRALNPKLVKDD--FLPSRVNWVVQ 739
Query: 769 SGAVDFLHLMLVCMRWLVSR---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRA 825
S AVD+LH MLV MRWL+++ R ISIHDE+RY+ P Y+ ALAL ++NLLTR
Sbjct: 740 SSAVDYLHCMLVLMRWLINKFKIPARLCISIHDELRYICPKSHIYQVALALQISNLLTRT 799
Query: 826 FCIKKLDMTDIPLSISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQ 885
F + +L M D+P S++FFS VE+D +RKE+ +DC TPSN GL GYG+ G+ L +
Sbjct: 800 FFVYQLGMRDLPESVAFFSSVEVDTCIRKEAKDDCVTPSNSSGLQNGYGVSPGQSLTMQD 859
Query: 886 TIDKANG 892
+DK G
Sbjct: 860 ILDKTGG 866
Score = 111 bits (278), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/186 (33%), Positives = 95/186 (51%), Gaps = 49/186 (26%)
Query: 3 DESWTNVSSLNSLSEVYKLYCEGKV-LDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLA 61
D W + +SLNSL ++Y+LYC+ + DK R+IF G++ED+ N+ L YCA D L
Sbjct: 2 DLDWLSETSLNSLPDIYRLYCKKEPPQDKQLRSIFESGTIEDVRTNFQELFNYCAVDVLM 61
Query: 62 TFEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTL 121
T+E+IQ L+P+F ERFPHP T G+LE+S+ Y
Sbjct: 62 TYEIIQVLWPIFKERFPHPATFCGLLEMSSMY---------------------------- 93
Query: 122 AGMLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDKYKDSLW 181
LP+N+NW+K+ ++ ++ + + K LLM DQA + KY +S
Sbjct: 94 ----------LPINDNWIKFQEKAESSYTENILRQKKLLMQLADQALA-----KYSNS-- 136
Query: 182 LWDQDW 187
Q+W
Sbjct: 137 ---QEW 139
Score = 52.8 bits (125), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 47/101 (46%), Gaps = 23/101 (22%)
Query: 236 LVEKFKPLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEA 295
++ + K LMQ D+ S EWYR L KP + D+
Sbjct: 115 ILRQKKLLMQLADQALAKYS---NSQEWYRDLIPKPVKDNLDS----------------- 154
Query: 296 WIPGPSLISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVP 336
GP+L++ M+I PKLL L W+ +PLH+ + WG L+P
Sbjct: 155 ---GPALLTAQMRIAPKLLKLCWQGLPLHYDQVLKWGVLIP 192
>gi|389748014|gb|EIM89192.1| hypothetical protein STEHIDRAFT_154872 [Stereum hirsutum FP-91666
SS1]
Length = 1354
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 214/471 (45%), Positives = 289/471 (61%), Gaps = 46/471 (9%)
Query: 431 FIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEISRMLSYWRNNHERVKK 490
F K+PHKDGE NVG+PL + FI D +L A ++++ SYW + +RV K
Sbjct: 771 FHKVPHKDGESANVGSPLGKTFIKFSQDGTLKSPGDLANSALDMNAQCSYWISARDRVLK 830
Query: 491 QFVVWLNKKDLPRRLVENI---ESEGRDYGVILPQLIVSGTLTRRAVEATWMTASNAVGE 547
Q VVW + + ++ ++ E E +G+I+PQ+I GT+TRRA+E TW+TASN+
Sbjct: 831 QMVVWEREGGMGMKVADSGVEGEQEKEKWGIIIPQVITMGTVTRRAIEKTWLTASNSKKN 890
Query: 548 RVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNA 607
RVGSEL+AM++APDGY+I+GADVDS+ELWI+SV+GD+ HGAT +GWMTL G K+
Sbjct: 891 RVGSELKAMVRAPDGYAIVGADVDSEELWISSVMGDAQFGL-HGATAIGWMTLEGTKAAG 949
Query: 608 TDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTL 667
TD+HS TA +GISR+ AK+ NY+RIYGAG R A LL Q N M +A+ A +Y
Sbjct: 950 TDLHSKTASILGISRDQAKVFNYSRIYGAGMRHAVLLLLQANSGMLPEEAQKLAENLYAS 1009
Query: 668 TKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQWYGGTESAMFNRLE 727
TKGK NT IF + W+GGTES +FN+LE
Sbjct: 1010 TKGK------------------------------NTHRQDIFGRKFWFGGTESFVFNKLE 1039
Query: 728 EIATSLQPVTPFLNCRLSRALEP---VSEDDSKFIQTRINWVVQSGAVDFLHLMLVCMRW 784
EIA S +P TP L C ++ AL +E S ++ +RINWVVQS VD+LHL++V M
Sbjct: 1040 EIALSDRPQTPALGCGVTYALSKEYLPAEFGSDYMPSRINWVVQSSGVDYLHLLIVSMDH 1099
Query: 785 LVSR---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIPLSIS 841
L+ + R++IS+HDE+RYLV E+KY ALAL V NL TR+ +L M D+P ++
Sbjct: 1100 LIQKYDIQARYLISVHDELRYLVKKEDKYRLALALQVANLWTRSMFAYRLGMDDLPQGVA 1159
Query: 842 FFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKANG 892
FFS V++D VLRKE+D C TPS P IP GE L++ Q + K G
Sbjct: 1160 FFSAVDVDFVLRKETDMTCVTPSQP------VPIPPGESLNVEQVLAKTKG 1204
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 92/185 (49%), Gaps = 39/185 (21%)
Query: 6 WTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLATFEV 65
W +++S NSL++V KL+C G +DK RN F+ + E+I N + +TYCA D T V
Sbjct: 312 WEDITSANSLADVAKLHC-GIEVDKEIRNDFMTHTPEEIMANVQDYLTYCASDVNVTHSV 370
Query: 66 IQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLAGML 125
+ LPD FL+ P+PV+ AG+L
Sbjct: 371 YAKV------------------------LPD--------------FLDACPNPVSFAGIL 392
Query: 126 ELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDKYKDSLWLWDQ 185
+ +++L VN W +Y + +T+ +L+ ++K L++ +A ++ ++++D +WL
Sbjct: 393 TMGSSFLTVNQEWERYIENAERTYRELDTKVKERLLELAVEAKDMMEGEQWRDDVWLSQL 452
Query: 186 DWSVK 190
DW+ K
Sbjct: 453 DWTPK 457
Score = 40.8 bits (94), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 23/38 (60%)
Query: 298 PGPSLISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLV 335
PG I+T ++TP LL L+WK PL R HGW Y +
Sbjct: 686 PGTIDITTRSRVTPILLKLSWKDCPLFHSREHGWTYRI 723
>gi|388857482|emb|CCF48990.1| related to MIP1-DNA-directed DNA polymerase gamma catalytic subunit,
mitochondrial [Ustilago hordei]
Length = 1912
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 237/617 (38%), Positives = 328/617 (53%), Gaps = 100/617 (16%)
Query: 309 ITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTDIKVPDAENIPLEQLKQLYNNITKQDNCE 368
I P LL ++W+ PL+ R HGW I D +P +T+Q
Sbjct: 892 IAPILLKISWRGCPLYRSREHGW---------IFRHDPSEVP--------ELVTRQTPLS 934
Query: 369 ANV--DNAQNSLRDSVETNISFIDCSKSAKRLEVIANVLDKKKLAEASSTDTSTDDADTP 426
+ D L VET + ++ ++ + +A T
Sbjct: 935 FGMAADGLIQHLAAPVETKAVKFKKGRPEEKSSSKSDSSAPPLIVKAFGNST-------- 986
Query: 427 REIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGV---DIG---AKRIIEISRMLSY 480
F K+PH +GE NVG+P ++ FI F D +L ++G AK +E++ SY
Sbjct: 987 ----FYKVPHSEGEGANVGSPFAKSFIAYFEDGTLQSQHPDEVGRTAAKTALELNAQCSY 1042
Query: 481 WRNNHERVKKQFVVWLNKKDLPRRLVENIESEGRDY--------GVILPQLIVSGTLTRR 532
W +RV KQ VVW R +D G+ILPQ+I GT+TRR
Sbjct: 1043 WIAVRDRVHKQMVVWDGDAGTSMRYPSGASGARQDKDGEANRRKGLILPQVISMGTVTRR 1102
Query: 533 AVEATWMTASNAVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGA 592
A+E TW+TASNA RVGSEL+AM++AP GYS++GADVDS+ELWI SV+GD+ HGA
Sbjct: 1103 AIENTWLTASNAKKNRVGSELKAMVKAPPGYSLVGADVDSEELWICSVMGDAQFGI-HGA 1161
Query: 593 TPLGWMTLSGQKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEM 652
T +GWMTL G K+ TD+HS TA +G SR AK+ NY+RIYGAG + A LL + NP +
Sbjct: 1162 TAVGWMTLEGTKALGTDLHSKTASILGTSRNQAKVFNYSRIYGAGIKHATHLLLKANPSV 1221
Query: 653 SKSDAKSKARKMYTLTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKP 712
+ +A KA+++Y TKG+ NT D+ F
Sbjct: 1222 TNEEATQKAKELYMATKGQ------------------------------NTHTDEFFGAK 1251
Query: 713 QWYGGTESAMFNRLEEIATSLQPVTPFLNCRLSRALEP------------VSEDDSKFIQ 760
W+GGTES +FN+LE IA S P TP L+C ++ AL +SE+ ++
Sbjct: 1252 FWFGGTESYVFNKLENIALSDNPKTPALDCGVTNALTKKFLGKVDFGNGRMSEE---YMP 1308
Query: 761 TRINWVVQSGAVDFLHLMLVCMRWLVSR---DTRFVISIHDEIRYLVPDEEKYETALALH 817
+RINWVVQS VD+LHL++ M WL R D RF++S+HDE+RYLV D+++Y ALAL
Sbjct: 1309 SRINWVVQSSGVDYLHLLITAMEWLSKRYDIDARFMLSVHDEVRYLVKDKDRYRAALALQ 1368
Query: 818 VTNLLTRAFCIKKLDMTDIPLSISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPL 877
+ N+ TRA KL M D+PL +FF+ V+IDKVLRKE+D+ C TPS+P IP+
Sbjct: 1369 IANIWTRAMFAFKLQMDDLPLGCAFFAQVDIDKVLRKEADDPCVTPSHP------EAIPV 1422
Query: 878 GEILDIYQTIDKANGVI 894
G +DI Q + G +
Sbjct: 1423 GVAMDIEQILKHTKGSL 1439
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 58/95 (61%), Gaps = 1/95 (1%)
Query: 2 TDESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEG-SLEDIENNWHNLMTYCAKDTL 60
T+ W +S NSL++V +L+ + K+ R++FV G S E+I + +L+TYCA D +
Sbjct: 488 TESQWLEETSKNSLADVARLHRIPMKVSKSARDVFVNGTSREEILKDVQHLLTYCASDVV 547
Query: 61 ATFEVIQALFPLFLERFPHPVTLAGMLELSTAYLP 95
T E+ + +P F R PHP T+AG+ L + +LP
Sbjct: 548 VTHEIFRRTWPDFAARCPHPATMAGVFGLGSTFLP 582
>gi|343425085|emb|CBQ68622.1| related to MIP1-DNA-directed DNA polymerase gamma catalytic subunit,
mitochondrial [Sporisorium reilianum SRZ2]
Length = 1898
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 253/679 (37%), Positives = 349/679 (51%), Gaps = 131/679 (19%)
Query: 265 RKLCVKPHSADKDAVSKQELIHDGISDTSEAWIP-----------GPSLISTSMQITPKL 313
R + +P AD + E I + AW P G ++ I P L
Sbjct: 827 RGISEEPSEADGATSAGAEAIPE------PAWWPKWYWDLYKSATGELQVTIRSAIAPIL 880
Query: 314 LSLTWKSMPLHFIRGHGWGYLVPYSTDIKVPDAENIPLEQLKQLYNNITKQDNCEANVDN 373
L ++W+ PL+ R HGW I + D EA
Sbjct: 881 LKISWRGCPLYRSREHGW-----------------------------IFRHDPSEA---- 907
Query: 374 AQNSLRDSVETNISF-IDCSKSAKRLEVIANVLDKKKLAEASSTDTST-DDADTP----R 427
S + +T ++F + + L + V K + +T+ D D P +
Sbjct: 908 ---SELVTRQTPLAFGMAADGLLQHLALPVEVKAAKFKKAKAKGETAVKGDKDAPALVVK 964
Query: 428 EIG---FIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGV---DIG---AKRIIEISRML 478
G F K+PH +GE NVG+P ++ FI F D +L ++G AK ++++
Sbjct: 965 AFGTSTFYKVPHSEGEGANVGSPFAKSFIAYFEDGTLESQHPDEVGRTAAKTALDLNAQC 1024
Query: 479 SYWRNNHERVKKQFVVWLNKKDLPR--------RLVENIESEGRDYGVILPQLIVSGTLT 530
SYW +RV KQ VVW + E R G+ILPQ++ GT+T
Sbjct: 1025 SYWIAVRDRVHKQMVVWNGEAGTAMCYPSGASGARQEKPGEADRRKGLILPQVVSMGTVT 1084
Query: 531 RRAVEATWMTASNAVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEH 590
RRA+E TW+TASNA RVGSEL+AM++AP GYS++GADVDS+ELWI SV+GD+ H
Sbjct: 1085 RRAIENTWLTASNAKKNRVGSELKAMVKAPPGYSLVGADVDSEELWICSVMGDAQFGI-H 1143
Query: 591 GATPLGWMTLSGQKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNP 650
GAT +GWMTL G K+ TD+HS TA +G SR AK+ NY+RIYGAG + A LL + NP
Sbjct: 1144 GATAVGWMTLEGTKALGTDLHSKTASILGTSRNQAKVFNYSRIYGAGIKHATHLLLKANP 1203
Query: 651 EMSKSDAKSKARKMYTLTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFD 710
MS +A KA+++Y TKG+ NT D++F
Sbjct: 1204 SMSSEEATQKAKELYMATKGQ------------------------------NTHSDELFG 1233
Query: 711 KPQWYGGTESAMFNRLEEIATSLQPVTPFLNCRLSRALEP------------VSEDDSKF 758
W+GGTES +FN+LE IA S P TP L+C ++ AL +SE+ +
Sbjct: 1234 AKFWFGGTESYVFNKLESIALSDNPKTPALDCGVTNALTKKYLGKVDFGNGRLSEE---Y 1290
Query: 759 IQTRINWVVQSGAVDFLHLMLVCMRWLVSR---DTRFVISIHDEIRYLVPDEEKYETALA 815
+ +RINWVVQS VD+LHL++ M WL R D RF++S+HDE+RYLV DE++Y ALA
Sbjct: 1291 MPSRINWVVQSSGVDYLHLLITAMEWLSKRYSIDARFMLSVHDEVRYLVKDEDRYRAALA 1350
Query: 816 LHVTNLLTRAFCIKKLDMTDIPLSISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGI 875
L V N+ TRA KL M D+PL +FF+ V+IDKVLRKE+D+ C TPS+P I
Sbjct: 1351 LQVANIWTRAMFAFKLQMDDLPLGCAFFAQVDIDKVLRKEADDPCVTPSHP------DAI 1404
Query: 876 PLGEILDIYQTIDKANGVI 894
P+G LDI Q + G +
Sbjct: 1405 PVGVALDIEQILKHTKGSL 1423
Score = 77.4 bits (189), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 90/211 (42%), Gaps = 52/211 (24%)
Query: 2 TDESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGS-LEDIENNWHNLMTYCAKDTL 60
+ W +S NSL++V +L+ + K+ R++FV+G+ E+I + +L+ YCA D
Sbjct: 478 AESQWLEETSKNSLADVARLHRIPMKVSKSARDVFVDGTPREEILRDAQHLLAYCASDVA 537
Query: 61 ATFEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVT 120
T E+ + +P F R PHP T+AG+ L +
Sbjct: 538 VTHEIFRRTWPDFAARCPHPATMAGVFGLGS----------------------------- 568
Query: 121 LAGMLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDKYKDSL 180
+LPV++ W+ Y + FN +N +++ L+D ++ L +D KD
Sbjct: 569 ---------TFLPVDDEWIDYQRRCDEQFNRINDQVQKCLVDLAEK----LREDGTKDVP 615
Query: 181 WLWDQDWSVKDLKLKKKANKTLSVDQETEEP 211
W L + + L VD E E P
Sbjct: 616 W---------SLAAQIAEERQLMVDPEHEGP 637
>gi|342319865|gb|EGU11810.1| Gamma DNA-directed DNA polymerase [Rhodotorula glutinis ATCC 204091]
Length = 1522
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 214/477 (44%), Positives = 288/477 (60%), Gaps = 51/477 (10%)
Query: 431 FIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEISRMLSYWRNNHERVKK 490
+ KLPH DGE NVGNPLS+ F+ F + L AK ++++ SYW+++ ER+
Sbjct: 956 YFKLPHPDGEEKNVGNPLSKPFVKAFENGILTSEYPIAKAALDLNASCSYWKSSRERITG 1015
Query: 491 QFVVWLN--KKDLPRRLVENIESEGRD-YGVILPQLIVSGTLTRRAVEATWMTASNAVGE 547
Q VVW +++ P + D G+ILPQ+I GT+TRRAVE TW+TASNA
Sbjct: 1016 QMVVWDGDARQEAPSPQAIAAAAAKADSQGLILPQVIPMGTITRRAVERTWLTASNAKKN 1075
Query: 548 RVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNA 607
RVGSEL++MI+AP GY+I+GADVDS+ELWI SV+GD+ HGAT +GWM L G KS
Sbjct: 1076 RVGSELKSMIRAPPGYAIVGADVDSEELWICSVMGDAQFGI-HGATAIGWMGLEGTKSAG 1134
Query: 608 TDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTL 667
TD+HS TA +GISR+ AK+ NY+RIYGAG A +LL + NP +SK +A A+ +Y
Sbjct: 1135 TDLHSKTASILGISRDDAKVFNYSRIYGAGVAHAVQLLLKSNPALSKDEATELAKNLYKA 1194
Query: 668 TKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQWYGGTESAMFNRLE 727
TKG NT FD+ W+GGTES +FN+LE
Sbjct: 1195 TKG-------------------------------NTDRSPAFDRKFWHGGTESFVFNKLE 1223
Query: 728 EIATSLQPVTPFLNCRLSRAL-------EPVSEDDSKFIQTRINWVVQSGAVDFLHLMLV 780
EIA +P TP L C L+ AL + +S+ F+ +R+NWVVQS VD+LHL++V
Sbjct: 1224 EIAMMARPKTPALGCGLTAALTKEYLKADGMSKAGEGFLPSRVNWVVQSSGVDYLHLLIV 1283
Query: 781 CMRWLVSR---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIP 837
M +L R D R++IS+HDE+RYLV +E+KY ALA+ V NL TR+ +L M D+P
Sbjct: 1284 SMEYLCKRFEIDARYLISVHDEVRYLVKEEDKYRAALAMQVANLWTRSLFAYRLQMGDLP 1343
Query: 838 LSISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKANGVI 894
+FFS V++D RKE C+TPSNP IP GE L+I T++K G +
Sbjct: 1344 QGCAFFSAVDVDSCFRKEVFMTCETPSNP------EAIPPGESLEIEDTLEKTAGTL 1394
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 65/114 (57%), Gaps = 11/114 (9%)
Query: 3 DESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLE--DIENNWHNLMTYCAKDTL 60
D W +VSS NSL+EV +L+C G DKT R + ++ SLE D + ++ L+ YCA+D
Sbjct: 458 DLDWRDVSSTNSLAEVARLHC-GIEADKTLREVLIDPSLEIKDARDFFNELIDYCARDVD 516
Query: 61 ATFEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLER 114
T V + L P FLE PHPVT AG+ +S LP + +P ++ER
Sbjct: 517 VTLRVYRVLLPKFLESCPHPVTFAGVTLMSQPVLP--------VDEKWPAYVER 562
>gi|393220623|gb|EJD06109.1| hypothetical protein FOMMEDRAFT_153471 [Fomitiporia mediterranea
MF3/22]
Length = 1327
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 235/601 (39%), Positives = 320/601 (53%), Gaps = 108/601 (17%)
Query: 298 PGPSLISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTDIKVPDAENIPLEQLKQL 357
PG ++ ++ P LL L+W PL R HGW + V PDA+ +
Sbjct: 718 PGTLDLTIRSRLAPLLLRLSWSGWPLFHSREHGWIFRV-------APDAQYATRSKKLDF 770
Query: 358 YNNITKQDNCEANVDNAQNSLRDSVETNISFIDCSKSAKRLEVIANVLDKKKLAEASSTD 417
Y D +A++ A LRD
Sbjct: 771 Y------DPADAHLQEA--VLRDGYS---------------------------------- 788
Query: 418 TSTDDADTPREIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEISRM 477
F KLPHKDGE NVG+P + F+ D +L + K ++++
Sbjct: 789 -------------FYKLPHKDGESANVGSPFGKTFMKYSQDGTLTSREGDTKDALDMNAQ 835
Query: 478 LSYWRNNHERVKKQFVVWLNKKDLPRRLVENIESEGRDYGVILPQLIVSGTLTRRAVEAT 537
SYW ++ +R+ Q VVW + K RL E G+I+PQ+I G +TRRA+E T
Sbjct: 836 CSYWISSRDRILNQMVVWNSDK---VRLGVKAEKPDGKVGMIIPQVITMGAVTRRAIEKT 892
Query: 538 WMTASNAVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGW 597
W+TASNA RVGSEL+AM++AP GY+I+GADVDS+ELWI+S +GD+ HGAT LGW
Sbjct: 893 WLTASNAKKNRVGSELKAMVRAPKGYAIVGADVDSEELWISSAMGDAQFGL-HGATALGW 951
Query: 598 MTLSGQKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDA 657
MTL G K+ TD+HS TA +GISR+ AK+ NY+RIYGAG R A LL Q NP M A
Sbjct: 952 MTLEGTKAAGTDLHSKTASILGISRDQAKVFNYSRIYGAGMRHAILLLLQSNPNMLPDIA 1011
Query: 658 KSKARKMYTLTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQWYGG 717
+ +A K+Y TKGK NT IF + W+GG
Sbjct: 1012 QQQAEKLYASTKGK------------------------------NTHRTDIFGRKFWFGG 1041
Query: 718 TESAMFNRLEEIATSLQPVTPFLNCRLSRALEP---VSEDDSKFIQTRINWVVQSGAVDF 774
+ES +FN+LEEIA S +P TP L C ++ AL + + ++ +RINWVVQS VD+
Sbjct: 1042 SESYVFNKLEEIAMSDKPRTPALGCGVTYALSKEYLPAGFGTDYMTSRINWVVQSSGVDY 1101
Query: 775 LHLMLVCMRWLVSR---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKL 831
LHL++V M L+++ R+++S+HDE+RYLV +E+KY ALAL + NL TR KL
Sbjct: 1102 LHLLIVSMEHLIAKYDIKARYLMSVHDELRYLVREEDKYRAALALQIANLWTRCLFAYKL 1161
Query: 832 DMTDIPLSISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKAN 891
M D+P ++FFS V++D VLRKE D C TPS P IP GE L+I + ++K N
Sbjct: 1162 GMDDLPQGVAFFSAVDVDHVLRKEVDLPCVTPSQP------TPIPPGESLNIIKALEKTN 1215
Query: 892 G 892
G
Sbjct: 1216 G 1216
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 97/208 (46%), Gaps = 45/208 (21%)
Query: 2 TDESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLA 61
+ + W +++S NSL++V KL+C G + K RN F+ S E+I ++ + YCA D
Sbjct: 374 SSKRWEDITSANSLADVAKLHC-GIDIGKEIRNDFMTRSREEIFEGINDYLDYCATDV-- 430
Query: 62 TFEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTL 121
E+ A++ +FP FL+ P PV+
Sbjct: 431 --EITHAVY----------------------------------TKVFPDFLQACPSPVSF 454
Query: 122 AGMLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDKYKDSLW 181
AG++ + +++L VN W Y + + +LN ++K L+ + L+ ++++KD +W
Sbjct: 455 AGVMTMGSSFLTVNEQWENYLRNAEGIYRELNEKIKKRLISIAEDVRLLMDEERWKDDVW 514
Query: 182 LWDQDWSVKDLKLKKKANKTLSVDQETE 209
L DW+ KKA K+ +D T+
Sbjct: 515 LSQLDWT------PKKAGKSRGIDVPTK 536
>gi|336388917|gb|EGO30061.1| hypothetical protein SERLADRAFT_445791 [Serpula lacrymans var.
lacrymans S7.9]
Length = 1329
Score = 394 bits (1011), Expect = e-106, Method: Compositional matrix adjust.
Identities = 210/472 (44%), Positives = 288/472 (61%), Gaps = 47/472 (9%)
Query: 431 FIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEISRMLSYWRNNHERVKK 490
F KLPHKDGE NVG+PL + F+ D ++ A ++++ SYW + +R+ K
Sbjct: 799 FYKLPHKDGEKANVGSPLGKSFMKYAQDGTMTSPGGEANEALDMNAQCSYWISARDRIIK 858
Query: 491 QFVVWLNKKDL----PRRLVENIESEGRDYGVILPQLIVSGTLTRRAVEATWMTASNAVG 546
Q VVW +++ + + + +G+ILPQ+I GT+TRRA+E TW+TASNA
Sbjct: 859 QMVVWQDEQSTMGFGTSEQGDKSVAAAQKWGIILPQVITMGTVTRRAIEKTWLTASNAKK 918
Query: 547 ERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSN 606
RVGSEL+AM++AP+GY+I+GADVDS+ELWI+S +GD+ HG+T +GWMTL G K+
Sbjct: 919 NRVGSELKAMVRAPEGYAIVGADVDSEELWISSCMGDAQFGL-HGSTAIGWMTLEGTKAA 977
Query: 607 ATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYT 666
TD+HS TA +GISR+ AK+ NY+RIYGAG R A LL Q N M A+ A +Y
Sbjct: 978 GTDLHSKTASILGISRDQAKVFNYSRIYGAGMRHAVLLLLQSNASMLPDQAQKLAENLYA 1037
Query: 667 LTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQWYGGTESAMFNRL 726
TKGK NT IF + W+GGTES +FN+L
Sbjct: 1038 STKGK------------------------------NTHRSDIFGRKFWFGGTESFLFNKL 1067
Query: 727 EEIATSLQPVTPFLNCRLSRALEP---VSEDDSKFIQTRINWVVQSGAVDFLHLMLVCMR 783
EEIA S P TP L C ++ AL +E S ++ +RINWVVQS VD+LHL++V M
Sbjct: 1068 EEIALSDCPRTPALGCGITYALSKEYLPAEFGSDYMTSRINWVVQSSGVDYLHLLIVSMD 1127
Query: 784 WLVSR---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIPLSI 840
+L+ R++IS+HDE+RYLV D+++Y ALAL + NL TR+ KL M D+P +
Sbjct: 1128 YLIKTYDIKARYLISVHDELRYLVADDDRYRAALALQIANLWTRSLFAYKLGMDDLPQGV 1187
Query: 841 SFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKANG 892
+FFS V++D VLRKE D C TPS+P IP GE L+I +T++K NG
Sbjct: 1188 AFFSAVDVDTVLRKEVDMPCVTPSHP------TPIPPGESLNIVRTLEKTNG 1233
Score = 95.9 bits (237), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 94/190 (49%), Gaps = 39/190 (20%)
Query: 1 MTDESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTL 60
++++ W +++S NSL++V KL+C+ V DK RN F+ + +I N H+ + YC++D
Sbjct: 388 LSNKRWEDLTSANSLADVAKLHCDITV-DKGIRNDFMSHTPSEILANIHDYLNYCSQDVF 446
Query: 61 ATFEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVT 120
T V + P FL R P PV+
Sbjct: 447 VTHAVFSQVL--------------------------------------PAFLARCPSPVS 468
Query: 121 LAGMLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDKYKDSL 180
AG+L + +++L VN +W Y + +T+ +L+ ++K+ L+D ++A ++ D +KDS
Sbjct: 469 FAGILTMGSSFLTVNESWEAYLENAERTYRELDEKVKTRLVDLAEEAKGMMEDGTWKDSS 528
Query: 181 WLWDQDWSVK 190
WL DW+ K
Sbjct: 529 WLAQLDWTPK 538
>gi|336375793|gb|EGO04129.1| hypothetical protein SERLA73DRAFT_102478 [Serpula lacrymans var.
lacrymans S7.3]
Length = 1279
Score = 394 bits (1011), Expect = e-106, Method: Compositional matrix adjust.
Identities = 210/472 (44%), Positives = 288/472 (61%), Gaps = 47/472 (9%)
Query: 431 FIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEISRMLSYWRNNHERVKK 490
F KLPHKDGE NVG+PL + F+ D ++ A ++++ SYW + +R+ K
Sbjct: 739 FYKLPHKDGEKANVGSPLGKSFMKYAQDGTMTSPGGEANEALDMNAQCSYWISARDRIIK 798
Query: 491 QFVVWLNKKDL----PRRLVENIESEGRDYGVILPQLIVSGTLTRRAVEATWMTASNAVG 546
Q VVW +++ + + + +G+ILPQ+I GT+TRRA+E TW+TASNA
Sbjct: 799 QMVVWQDEQSTMGFGTSEQGDKSVAAAQKWGIILPQVITMGTVTRRAIEKTWLTASNAKK 858
Query: 547 ERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSN 606
RVGSEL+AM++AP+GY+I+GADVDS+ELWI+S +GD+ HG+T +GWMTL G K+
Sbjct: 859 NRVGSELKAMVRAPEGYAIVGADVDSEELWISSCMGDAQFGL-HGSTAIGWMTLEGTKAA 917
Query: 607 ATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYT 666
TD+HS TA +GISR+ AK+ NY+RIYGAG R A LL Q N M A+ A +Y
Sbjct: 918 GTDLHSKTASILGISRDQAKVFNYSRIYGAGMRHAVLLLLQSNASMLPDQAQKLAENLYA 977
Query: 667 LTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQWYGGTESAMFNRL 726
TKGK NT IF + W+GGTES +FN+L
Sbjct: 978 STKGK------------------------------NTHRSDIFGRKFWFGGTESFLFNKL 1007
Query: 727 EEIATSLQPVTPFLNCRLSRALEP---VSEDDSKFIQTRINWVVQSGAVDFLHLMLVCMR 783
EEIA S P TP L C ++ AL +E S ++ +RINWVVQS VD+LHL++V M
Sbjct: 1008 EEIALSDCPRTPALGCGITYALSKEYLPAEFGSDYMTSRINWVVQSSGVDYLHLLIVSMD 1067
Query: 784 WLVSR---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIPLSI 840
+L+ R++IS+HDE+RYLV D+++Y ALAL + NL TR+ KL M D+P +
Sbjct: 1068 YLIKTYDIKARYLISVHDELRYLVADDDRYRAALALQIANLWTRSLFAYKLGMDDLPQGV 1127
Query: 841 SFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKANG 892
+FFS V++D VLRKE D C TPS+P IP GE L+I +T++K NG
Sbjct: 1128 AFFSAVDVDTVLRKEVDMPCVTPSHP------TPIPPGESLNIVRTLEKTNG 1173
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 94/190 (49%), Gaps = 39/190 (20%)
Query: 1 MTDESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTL 60
++++ W +++S NSL++V KL+C+ V DK RN F+ + +I N H+ + YC++D
Sbjct: 315 LSNKRWEDLTSANSLADVAKLHCDITV-DKGIRNDFMSHTPSEILANIHDYLNYCSQDVF 373
Query: 61 ATFEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVT 120
T V + P FL R P PV+
Sbjct: 374 VTHAVFSQVL--------------------------------------PAFLARCPSPVS 395
Query: 121 LAGMLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDKYKDSL 180
AG+L + +++L VN +W Y + +T+ +L+ ++K+ L+D ++A ++ D +KDS
Sbjct: 396 FAGILTMGSSFLTVNESWEAYLENAERTYRELDEKVKTRLVDLAEEAKGMMEDGTWKDSS 455
Query: 181 WLWDQDWSVK 190
WL DW+ K
Sbjct: 456 WLAQLDWTPK 465
>gi|390598747|gb|EIN08144.1| hypothetical protein PUNSTDRAFT_44745 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 1665
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 214/477 (44%), Positives = 288/477 (60%), Gaps = 48/477 (10%)
Query: 423 ADTPREIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEISRMLSYWR 482
D E F K+PHKDGE NVGNPL + F+ D ++ AK ++++ SYW
Sbjct: 1106 GDMACEFVFYKMPHKDGEEANVGNPLGKTFMKYAQDGTMTSPSDAAKDALDMNGQCSYWI 1165
Query: 483 NNHERVKKQFVVWLNKKDLPRRLVENIESEGRDYGVILPQLIVSGTLTRRAVEATWMTAS 542
+ +R+ Q VVW +D R L E +GVILPQ++ GT+TRRA+E TW+TAS
Sbjct: 1166 SARDRILNQIVVW---QDAKRELGFPTSGEDEKWGVILPQMVTMGTVTRRAMERTWLTAS 1222
Query: 543 NAVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSG 602
NA RVGSEL+AM++AP GY+I+GADVDS+ELWIASV+GD+ HGAT LGWMTL G
Sbjct: 1223 NAKKNRVGSELKAMVRAPPGYAIVGADVDSEELWIASVLGDAQFGM-HGATALGWMTLEG 1281
Query: 603 QKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKAR 662
K+ TD+HS TA +GISR+ AK+ NY+RIYGAG R A +LL Q + MS A+ A
Sbjct: 1282 TKAAGTDLHSKTASILGISRDQAKVFNYSRIYGAGMRHAVQLLLQNSAGMSVEKAQELAT 1341
Query: 663 KMYTLTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQWYGGTESAM 722
++Y TKGK +R KD +F + WYGGTES +
Sbjct: 1342 ELYARTKGKNTHR-KD-----------------------------LFGRKFWYGGTESVV 1371
Query: 723 FNRLEEIATSLQPVTPFLNCRLSRALEPVSEDD---SKFIQTRINWVVQSGAVDFLHLML 779
FN+LE +A + P TP L C ++ AL + + ++ +RINWVVQS VD+LH+++
Sbjct: 1372 FNKLEAVALADVPQTPALGCGVTDALTKAYLTEGFGTDYMTSRINWVVQSSGVDYLHMLI 1431
Query: 780 VCMRWLVSRD----TRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTD 835
V M L+ RD R++IS+HDE+RYLV +E+KY ALAL + +L TR +L + D
Sbjct: 1432 VAMEHLM-RDFNIRARYLISVHDELRYLVKEEDKYRAALALQIAHLWTRTMFAYRLGLDD 1490
Query: 836 IPLSISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKANG 892
+P ++FFS V++DKVLRKE D C TPS P IP GE L I + K +G
Sbjct: 1491 LPQGVAFFSAVDVDKVLRKEVDMPCVTPSQP------NPIPPGESLSIVDVLKKTDG 1541
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 94/201 (46%), Gaps = 39/201 (19%)
Query: 6 WTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLATFEV 65
W +++S NSL++V LYC KV +K R+ F+ S E+I + + YCA D +V
Sbjct: 684 WEDLTSANSLADVASLYCGIKV-EKEIRSDFMTHSREEILEGVQDYLNYCANDV----DV 738
Query: 66 IQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLAGML 125
A++ + P F ER PHPV+ AG+L
Sbjct: 739 THAVY----------------------------------SKVLPAFRERCPHPVSFAGIL 764
Query: 126 ELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDKYKDSLWLWDQ 185
+ +++LPVN W +Y + +T+ +L+ +KS L++ +QA + + +K+S WL
Sbjct: 765 TMGSSFLPVNQEWERYLENAERTYKELDDGVKSRLVELAEQARGMAETEAWKESPWLSQL 824
Query: 186 DWSVKDLKLKKKANKTLSVDQ 206
DW+ K + + S Q
Sbjct: 825 DWTPKKVGASRGNGAVASTSQ 845
Score = 47.4 bits (111), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 67/186 (36%), Gaps = 52/186 (27%)
Query: 200 KTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRRELVEKFKPLMQTKDRLPVNSSYLIG 259
K S D E +P E + NG T D + + +K ++
Sbjct: 984 KPRSADDEDADPWELLDWTANGPRSTRDSKKSKEKPKADK-----------------VVY 1026
Query: 260 YPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIPGPSLISTSMQITPKLLSLTWK 319
+P+WY L +P PG ++ S +I+P LL L+W+
Sbjct: 1027 WPKWYWDLT-RPRKGHP---------------------PGSLDLTVSKRISPLLLQLSWQ 1064
Query: 320 SMPLHFIRGHGWGYLVPYSTDIKVPDAENIPLEQLKQ------------LYNNITKQDNC 367
PL R HGW + VP S K P + PL Q ++ + +D
Sbjct: 1065 GWPLFHSREHGWAFRVPRSVAYK-PARTSTPLYFAHQADAKLGDMACEFVFYKMPHKDGE 1123
Query: 368 EANVDN 373
EANV N
Sbjct: 1124 EANVGN 1129
>gi|328766377|gb|EGF76432.1| hypothetical protein BATDEDRAFT_14887 [Batrachochytrium
dendrobatidis JAM81]
Length = 1063
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 282/908 (31%), Positives = 415/908 (45%), Gaps = 243/908 (26%)
Query: 6 WTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENN--WHNLMTYCAKDTLATF 63
W +S+NSL EV KL+ + KV DK R+ F + ++ + LM+YCA+D T
Sbjct: 288 WLTKTSVNSLFEVAKLHLKRKV-DKAVRDYFSSSDMSQFDDPALFQTLMSYCAEDVKVTH 346
Query: 64 EVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLAG 123
E LF LFP F + PHP + AG
Sbjct: 347 E----LFGF----------------------------------LFPRFEVKCPHPASFAG 368
Query: 124 MLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQAC-----SLLHD----- 173
+L + +YL V ++W ++ +D+C+ C S+ HD
Sbjct: 369 VLHMGKSYLTVTSDWKQF-------------------VDRCENICSNTQQSIEHDLSALA 409
Query: 174 ---------DKYKDSLWLWDQDWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQ 224
+ YK+ W DW+ K ++L
Sbjct: 410 ESALALAEGEAYKNDPWFKFLDWTPKKVRL------------------------------ 439
Query: 225 TEDEFVKRRRELVEKFKPLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQEL 284
T ++ + +V +P D ++LI P+WY C + S++K
Sbjct: 440 TMPKYSSKDGSIVHPARPFKSKGD------AHLIDKPKWY---CDQWDSSNKRL------ 484
Query: 285 IHDGISDTSEAWIPGPSLISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTDIKVP 344
L+STS +I P LL + W P+ + R +GW Y P DI P
Sbjct: 485 -----------------LLSTSRRIVPYLLRMNWDGFPISYCRAYGWMYRRPVK-DIP-P 525
Query: 345 DAENIPLEQLKQLYNNITKQDNCEANVDNAQNSLRDSVETNISFIDCSKSAKRLEVIANV 404
D+E + L QL ++ +D K + IA
Sbjct: 526 DSECLKL----QLSFSVDPKD------------------------------KAYDPIATF 551
Query: 405 LDKKKLAEASSTDTSTDDADTPREIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGV 464
++ T+ + P +I H + L P +++ + K +
Sbjct: 552 DEENAYFRIPHTNGENQNCGNPLSKPYIT--HFEKGILTSAVPEAQNILEKHAQ------ 603
Query: 465 DIGAKRIIEISRMLSYWRNNHERVKKQFVVWLNKKDLPRRLVENIESEGRDYGVILPQLI 524
+YW ++ R+ QF+VW + K + L + + GVILP I
Sbjct: 604 -------------CTYWISSRARINGQFIVWDSAK---QPLGYASHANDDNIGVILPCTI 647
Query: 525 VSGTLTRRAVEATWMTASNAVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDS 584
GT+TRRAVE WMTASNA R+GSE+++MI GYS++GADVDS+ELWIASV GD+
Sbjct: 648 PMGTITRRAVEPLWMTASNAKENRIGSEVKSMIMPAKGYSLVGADVDSEELWIASVFGDA 707
Query: 585 YCAKEHGATPLGWMTLSGQKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERL 644
+HG+T +G+MTL G K+ TD+HS T K +GISR +K+ NY RIYGAG R+A +L
Sbjct: 708 QFG-QHGSTAIGFMTLQGAKAAGTDLHSTTGKILGISRNQSKVFNYGRIYGAGIRYAVQL 766
Query: 645 LKQFNPEMSKSDAKSKARKMYTLTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTS 704
L Q N +++ A+ KA ++Y TKG++ L G + L
Sbjct: 767 LMQGNSNLTREMAEKKAEQLYKSTKGRRHRSL--GRFDNL-------------------- 804
Query: 705 VDKIFDKPQWYGGTESAMFNRLEEIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRIN 764
W+GGTES MFN L+ IAT P TP L C++ AL P + + +F+ +RIN
Sbjct: 805 ---------WHGGTESMMFNTLDWIATYSDPRTPILGCQIPDALMPQNVRN-QFMPSRIN 854
Query: 765 WVVQSGAVDFLHLMLVCMRWLVSR---DTRFVISIHDEIRYLVPDEEKYETALALHVTNL 821
W VQS VD+LHL+L+ M +L+ R D RF+ISIHDE+RY++ DE LALH++NL
Sbjct: 855 WAVQSSGVDYLHLLLISMNYLMRRLNIDGRFLISIHDEVRYIIKDEHVDLACLALHISNL 914
Query: 822 LTRAFCIKKLDMTDIPLSISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEIL 881
TRA +L + D+PL+++FFS V++D LRKE D C TPSN G IP G L
Sbjct: 915 WTRAMFSSRLGLHDLPLNVAFFSLVDVDHCLRKEVDMQCVTPSN------GSPIPPGRSL 968
Query: 882 DIYQTIDK 889
+ +TI++
Sbjct: 969 TVNETIER 976
>gi|340959331|gb|EGS20512.1| DNA polymerase gamma-like protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 1194
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 282/895 (31%), Positives = 409/895 (45%), Gaps = 206/895 (23%)
Query: 3 DESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLAT 62
+E W SS+NSL +V + + + ++K R+ F E + + L+TYCA D
Sbjct: 338 EELWVERSSINSLRDVAQFHLD-ITIEKELRDSFGELDRDGVLAKLDELLTYCAID---- 392
Query: 63 FEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLA 122
T T V +A+FP FL PHPV+ A
Sbjct: 393 ----------------------------------TDITHRVYKAVFPNFLSTCPHPVSFA 418
Query: 123 GMLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDK---YKDS 179
+ L++ LPVN +W Y + T++ L+ ++ L+ ++A + DK Y++
Sbjct: 419 ALRHLASVILPVNKSWDAYIANAEATYHRLSDAVQERLIFLAEKALEI--KDKPEVYQND 476
Query: 180 LWLWDQDWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRRELVEK 239
W+ DWS +++K+ K K + P R +
Sbjct: 477 PWMKQLDWSGQEIKMVKGKRK-------GDPP----------------------RPAARQ 507
Query: 240 FKPLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIPG 299
KP G P+WY+ L S
Sbjct: 508 KKP----------------GMPQWYKDLFATNDS-------------------------- 525
Query: 300 PSLISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTDIKVPDAENIPLEQLKQLYN 359
P I+ +I P LL L+W PL + HGW + VP K D P
Sbjct: 526 PINITVRTRIAPLLLRLSWDGHPLFWSNAHGWTFRVPRGQSKKYEDKLMTP--------- 576
Query: 360 NITKQDNCEANVDNAQNSLRDSVETNISFIDCSKSAKRLEVIANVLDKKKLAEASSTDTS 419
CE D A LR+ ++ ++ F + D
Sbjct: 577 -------CEFP-DEADKHLREDMD-HVYF-----------------------KLPHKDGP 604
Query: 420 TDDADTPREIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEISRMLS 479
T P G++ K L+ P +++ + N+ I A+ I +S+M+
Sbjct: 605 TARCVNPMAKGYLSYFEKGT--LSSEYPYAKEALEM---NASCSYWISARDRI-MSQMVV 658
Query: 480 YWRNNHERVKKQFVVWLNKKDLPRRLVENIESEGRDYGVILPQLIVSGTLTRRAVEATWM 539
Y +++ L K P+ E +E G ILPQ+I GT+TRRAVE TW+
Sbjct: 659 Y----EDQLPPSMTTALPKPSQPQPSDEKHPNETSVCGFILPQVIPMGTITRRAVENTWL 714
Query: 540 TASNAVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMT 599
TASNA RVGSEL+AM++AP GY +GADVDS+ELWIASV+GD+ + HG +G+MT
Sbjct: 715 TASNAKKNRVGSELKAMVRAPPGYVFVGADVDSEELWIASVVGDA-TFRLHGGNAIGFMT 773
Query: 600 LSGQKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKS 659
L G K+ TD+HS TA +GI+R AK+ NY RIYGAG +FA +LL+QFNP +S+ +
Sbjct: 774 LEGTKAAGTDLHSRTASILGITRNDAKVFNYGRIYGAGLKFAAQLLRQFNPSLSEQETMD 833
Query: 660 KARKMYTLTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQWYGGTE 719
A K+Y TKG K T+ ++ +P W GGTE
Sbjct: 834 IASKLYASTKGTK------------------------------TNRKVLYKRPFWRGGTE 863
Query: 720 SAMFNRLEEIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLML 779
S +FN+LEE A +P TP L ++ AL ++ +RINW +QS VD+LHL++
Sbjct: 864 SFVFNKLEEFAEQERPRTPVLGAGITEALLGRFIRKGGYLTSRINWAIQSSGVDYLHLLI 923
Query: 780 VCMRWLVSR---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDI 836
V M +L+ R R I++HDEIRYLV + +KY A+AL V NL TR +++ + D+
Sbjct: 924 VAMDYLIRRFNLAARLAITVHDEIRYLVQEHDKYRAAMALQVANLWTRCMFAQQVGIHDL 983
Query: 837 PLSISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKAN 891
P S +FFS V+ID VLRKE D DC TPSNP IP GE +DI+ +DK +
Sbjct: 984 PQSCAFFSSVDIDHVLRKEVDMDCVTPSNP------NPIPPGESIDIHTLLDKGD 1032
>gi|321252611|ref|XP_003192466.1| gamma DNA-directed DNA polymerase [Cryptococcus gattii WM276]
gi|317458934|gb|ADV20679.1| Gamma DNA-directed DNA polymerase, putative [Cryptococcus gattii
WM276]
Length = 1429
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 213/480 (44%), Positives = 293/480 (61%), Gaps = 63/480 (13%)
Query: 431 FIKLPHKDGEHLNVGNPLSRDFINKFSDNSLA------GVDIGAKRIIEISRM---LSYW 481
+ +LPHKDGE NVGNPLS+ F+ LA G D+ AK + + M SYW
Sbjct: 939 YFRLPHKDGEGKNVGNPLSKSFVKSIESGELASAAAESGDDVAAKAATDATNMNAFCSYW 998
Query: 482 RNNHERVKKQFVVWLNKKDLPRRLVENIESEGRDYGVILPQLIVSGTLTRRAVEATWMTA 541
++ ER+ Q VV+ ++ ++G+ILPQ+I GT+TRRAVEATW+TA
Sbjct: 999 ISSRERIMDQMVVYRDQ----------------EFGMILPQVITMGTVTRRAVEATWLTA 1042
Query: 542 SNAVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLS 601
SNA RVGSEL+AM++AP GYSI+GADVDS+ELWI+SV+GDS HGAT +GWMTL
Sbjct: 1043 SNAKKNRVGSELKAMVRAPPGYSIVGADVDSEELWISSVMGDSQFGM-HGATAIGWMTLE 1101
Query: 602 GQKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKA 661
G KS TD+HS TA +GISR+ AK+ NY+RIYGAG++ A +LL Q + +++K A A
Sbjct: 1102 GNKSAGTDLHSKTANILGISRDAAKVFNYSRIYGAGKKHAVQLLLQGDSKLTKETAGKLA 1161
Query: 662 RKMYTLTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQWYGGTESA 721
+Y TKG K R ++ L L W+GG+ES
Sbjct: 1162 DNLYKSTKGAKAVRARNLPLASLPS--------------------------LWHGGSESY 1195
Query: 722 MFNRLEEIATSLQPVTPFLNCRLSRAL-EPVSEDDSKFIQTRINWVVQSGAVDFLHLMLV 780
+FN LE IA S +P TP L C ++RAL + ++++ ++ +RINWVVQS VD+LHL++V
Sbjct: 1196 LFNTLEAIALSDRPTTPALGCGVTRALRKSYLDENASYLPSRINWVVQSSGVDYLHLLIV 1255
Query: 781 CMRWLVSR---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIP 837
M +L+ + R+++S+HDE+RYL +E++Y ALAL + N TRA L + D+P
Sbjct: 1256 SMEYLIKKYDIQARYLLSVHDEVRYLAKEEDRYRAALALQIANAWTRALFCFNLGIDDMP 1315
Query: 838 LSISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDK-ANGVIGT 896
I+FFS V+ID VLRKE C+TPS+P IP GE LDI ++K G +GT
Sbjct: 1316 QGITFFSAVDIDHVLRKEVFLTCETPSHP------KVIPAGESLDINALLEKIPRGDLGT 1369
Score = 83.6 bits (205), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 78/335 (23%), Positives = 137/335 (40%), Gaps = 104/335 (31%)
Query: 6 WTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLE---DIENNWHNLMTYCAKDTLAT 62
W +V+S+NSL+EV L+C G +DK+ R+ F + S++ I + + L++YCA D
Sbjct: 473 WEDVTSMNSLAEVAALHC-GYAVDKSVRDSFGDDSIKHASQIRSELNQLLSYCADDV--- 528
Query: 63 FEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLA 122
R H +V +FPLFLE PHP TL+
Sbjct: 529 -------------RMTH----------------------DVYAKVFPLFLESCPHPATLS 553
Query: 123 GMLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDKYKDSLWL 182
G+L + ++LPV+ +W +Y + +T+ +++ +K L ++ + + K W
Sbjct: 554 GVLAMGNSFLPVDQSWKEYLRNAEETYREMDAAVKKALRLLAEKLKA--EGEPKKGDPWA 611
Query: 183 WDQDWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRRELVEKFKP 242
DWS K + ++K L Q ++ + RE + KP
Sbjct: 612 SQLDWSPKSARW---SDKDLEGTQ---------------------KYPVQSREGAQPRKP 647
Query: 243 LMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIPGPSL 302
SS + P W ++ HS K +S++ L+
Sbjct: 648 ----------ESSSSVSSPAWVTQISSN-HSVLKSNMSQRYLL----------------- 679
Query: 303 ISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPY 337
P LL +++K P+ ++ HGW ++VP+
Sbjct: 680 --------PLLLRMSFKGHPVAYLSEHGWCFMVPH 706
>gi|392577131|gb|EIW70261.1| hypothetical protein TREMEDRAFT_29880, partial [Tremella mesenterica
DSM 1558]
Length = 1437
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 206/475 (43%), Positives = 291/475 (61%), Gaps = 61/475 (12%)
Query: 431 FIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDI----------GAKRIIEISRMLSY 480
+++LPHKDGE NVGNPLS+ F+ L+ + A+ +++ + SY
Sbjct: 797 YLRLPHKDGEGKNVGNPLSKSFVKAIESGELSSLTADGSEGETTAQAARDATQLNALCSY 856
Query: 481 WRNNHERVKKQFVVWLNKKDLPRRLVENIESEGRDYGVILPQLIVSGTLTRRAVEATWMT 540
W ++ ER+ Q V + S + G+ILPQ+I GT+TRRAVEATW+T
Sbjct: 857 WISSRERIMDQLV--------------HYPSTTSEQGMILPQMITMGTVTRRAVEATWLT 902
Query: 541 ASNAVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTL 600
ASNA RVGSEL+AM++AP GYSI+GADVDS+ELWI+SV+GDS HG+T +GWMTL
Sbjct: 903 ASNAKPNRVGSELKAMVRAPPGYSIVGADVDSEELWISSVMGDSQFGF-HGSTAIGWMTL 961
Query: 601 SGQKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSK 660
G KS TD+HS TA + ISR+ AK+ NY+RIYGAG + A +LL Q +P ++K +A +
Sbjct: 962 EGTKSTGTDLHSKTASILSISRDAAKVFNYSRIYGAGVKHAIQLLLQGDPTLNKEEASKR 1021
Query: 661 ARKMYTLTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQWYGGTES 720
+R++Y TKG K+ R N + + W+GG+ES
Sbjct: 1022 SRELYKSTKGMKIKR--------------------------NDQLPPSTIESIWHGGSES 1055
Query: 721 AMFNRLEEIATSLQPVTPFLNCRLSRALEPVSEDD-SKFIQTRINWVVQSGAVDFLHLML 779
+FN LE IA+S +P+TP LNC ++ AL+ D+ + ++ +RINWVVQS VD+LH++L
Sbjct: 1056 FLFNTLESIASSEKPLTPALNCGITNALKKSYLDERNDYLPSRINWVVQSSGVDYLHMLL 1115
Query: 780 VCMRWLVSR---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDI 836
+CM +L+ + R++IS+HDEIRYLV +++KY+ LAL ++N TR+ L M D+
Sbjct: 1116 ICMEYLIRKYEIKARYIISVHDEIRYLVEEKDKYKCGLALQISNAWTRSLFCYNLGMKDL 1175
Query: 837 PLSISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKAN 891
P ++FFS V+ D V RKE DCKTPS+ IP GE LDI Q +DK
Sbjct: 1176 PQGVTFFSSVDFDIVWRKEVTMDCKTPSH------DLVIPPGESLDILQILDKTG 1224
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 59/93 (63%), Gaps = 4/93 (4%)
Query: 6 WTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLED---IENNWHNLMTYCAKDTLAT 62
W +V+S+NSL+EV L+C G +DK+ RN F + +++ I L++YCAKD T
Sbjct: 309 WQDVTSVNSLAEVASLHC-GHSVDKSIRNRFSDETIKHASMIRLELQELISYCAKDVKVT 367
Query: 63 FEVIQALFPLFLERFPHPVTLAGMLELSTAYLP 95
EV + +FPLFL+ PHP T G+L + ++LP
Sbjct: 368 HEVYRKVFPLFLQSCPHPATFGGILTMGNSFLP 400
>gi|240275320|gb|EER38834.1| DNA polymerase gamma [Ajellomyces capsulatus H143]
Length = 1084
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 283/897 (31%), Positives = 395/897 (44%), Gaps = 241/897 (26%)
Query: 3 DESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLAT 62
+E W SS+NSL +V K +C +DK R+ F + I L+ YCA D
Sbjct: 279 EELWVGRSSVNSLRDVAKFHC-NVTIDKAQRDHFGDLDRSGILERLDELLDYCAAD---- 333
Query: 63 FEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLA 122
V++ T V + +FP FLE PHPV+
Sbjct: 334 ------------------VSI----------------THRVYKQVFPNFLEVCPHPVSFG 359
Query: 123 GMLELSTAYLPVNNNWVKYFNESCQTFND--LNVEMKSLLMDKCDQACSLLHDDK---YK 177
+ LS+ LPVNN W +Y + N + E L CD A ++ DK Y+
Sbjct: 360 ALQHLSSVILPVNNTWDEYLKMRRRPINAAWICTEAAGGL---CDSALAV--KDKPEVYE 414
Query: 178 DSLWLWDQDWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRRELV 237
+ WL DWS +++++ K K G+
Sbjct: 415 NDPWLRQLDWSGQEIRMVKG--------------------RKKGD--------------- 439
Query: 238 EKFKPLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWI 297
P + ++P G P+WY+ L SA
Sbjct: 440 ---PPRPAARQKMP-------GMPKWYKALFPTSTSAIN--------------------- 468
Query: 298 PGPSLISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTDIKVPDAENIPLEQLKQL 357
+S ++ P LL L+W PL + HGW + +VP E
Sbjct: 469 -----LSVRTRLAPILLKLSWLGYPLVWSDVHGWTF--------QVPKGE---------- 505
Query: 358 YNNITKQDNCEANVDNAQN-SLRDSVETNISFIDCSKSAKRLEVIANVLDKKKLAEASST 416
N Q N+ +N SLRD
Sbjct: 506 IKNFENQAVAPCNMAEEKNFSLRDD----------------------------------- 530
Query: 417 DTSTDDADTPREIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEISR 476
RE + KLPHKDG +PL++ ++ F L+ AK +E++
Sbjct: 531 ----------REHLYFKLPHKDGPDARCSSPLAKGYLQYFEGGKLSSQFALAKEALEMNA 580
Query: 477 MLSYWRNNHERVKKQFVVWLNKKDLPRRLVENIESEGRDYGVILPQLIVSGTLTRRAVEA 536
SYW + +R+ Q VV+ N D+ R ++ + G ILPQ+I GT+TRRAVE
Sbjct: 581 SCSYWISARDRIMSQMVVYHN--DIERLQNKSSSNSTLKQGYILPQIIPMGTITRRAVEN 638
Query: 537 TWMTASNAVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLG 596
TW+TASNA RVGSEL+AM++AP GY +GADVDS+ELWIAS++GD+ + HG +G
Sbjct: 639 TWLTASNAKANRVGSELKAMVRAPPGYVFVGADVDSEELWIASLVGDAQF-QIHGGNAIG 697
Query: 597 WMTLSGQKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSD 656
+MTL G KS TD+HS TA +GISR AK+ NY RIYGAG +FA LL+QFNP MS+ +
Sbjct: 698 FMTLEGTKSAGTDLHSKTASILGISRNDAKVFNYGRIYGAGLKFAATLLRQFNPSMSEQE 757
Query: 657 AKSKARKMYTLTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQWYG 716
K A K+Y TKG+ H + R K E
Sbjct: 758 TKRVAAKLYKETKGE-----APNHSYSISLRSSRKQE----------------------- 789
Query: 717 GTESAMFNRLEEIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLH 776
+P TP L ++ AL + F+ +RINW +QS VD+LH
Sbjct: 790 -----------------RPRTPVLGAGITEALMRRFINKGSFMTSRINWAIQSSGVDYLH 832
Query: 777 LMLVCMRWLVSR---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDM 833
L+++ M +L+ R D R I++HDEIRYLV + +KY A+AL V NL TRA +++ +
Sbjct: 833 LLIISMDFLIRRFNLDARLAITVHDEIRYLVKEHDKYRAAMALQVANLWTRAMFSQEMGI 892
Query: 834 TDIPLSISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKA 890
D+P S ++FS V+ID VLRKE D DC TPS+P IP GE LDI + K
Sbjct: 893 DDLPQSCAYFSAVDIDTVLRKEVDMDCVTPSHP------NKIPHGESLDIENLLKKG 943
>gi|400601566|gb|EJP69209.1| DNA polymerase family A [Beauveria bassiana ARSEF 2860]
Length = 1133
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 205/470 (43%), Positives = 282/470 (60%), Gaps = 44/470 (9%)
Query: 427 REIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEISRMLSYWRNNHE 486
R+ + KLPHKDG NP+++ +++ F + +L+ AK +E++ SYW + +
Sbjct: 574 RQHVYFKLPHKDGPTARCANPMAKGYLSYFENGTLSSEYSYAKEALEMNASCSYWISARD 633
Query: 487 RVKKQFVVWLNKKDLPRRLVENIESEGRDYGVILPQLIVSGTLTRRAVEATWMTASNAVG 546
R+ Q VV +DLP ++G G ILPQ+I GT+TRRAVE TW+TASNA
Sbjct: 634 RIMSQMVV--KNQDLPNSSKAPESADG--LGFILPQIIPMGTITRRAVENTWLTASNAKK 689
Query: 547 ERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSN 606
RVGSEL+AM++AP+GYS +GADVDSQELWIAS+IGD+ K HG +G+MTL G K+
Sbjct: 690 NRVGSELKAMVRAPEGYSFVGADVDSQELWIASLIGDA-TFKLHGGNAVGFMTLEGTKAA 748
Query: 607 ATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYT 666
TD+HS TA +GI+R AK+ NY RIYGAG +FA LL+QFNPE+S+ A K+Y
Sbjct: 749 GTDLHSRTASILGITRNDAKVFNYGRIYGAGLKFAATLLRQFNPELSEKQTMETASKLYA 808
Query: 667 LTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQWYGGTESAMFNRL 726
TKG K T+ I+ +P W GGTES +FN+L
Sbjct: 809 STKGTK------------------------------TNRKTIYKRPFWRGGTESFVFNKL 838
Query: 727 EEIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLVCMRWLV 786
EE A +P TP L ++ AL ++ +RINW +QS VD+LHL++V M +L
Sbjct: 839 EEFAEQERPRTPVLGAGITEALMGRFVSKGGYLTSRINWAIQSSGVDYLHLLIVSMDYLA 898
Query: 787 SR---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIPLSISFF 843
R D R I++HDEIRYLV +E+KY A+AL V N+ TRA +++ + D+P S ++F
Sbjct: 899 RRFNIDARLAITVHDEIRYLVKNEDKYRAAMALQVANVWTRAIFSQQVGINDLPQSCAYF 958
Query: 844 SGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKANGV 893
S ++ID VLRKE D +C TPS+P IP GE LDI + K +
Sbjct: 959 SAIDIDHVLRKEVDMECITPSHP------NAIPPGESLDINTLLSKGDAA 1002
Score = 72.8 bits (177), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 76/332 (22%), Positives = 120/332 (36%), Gaps = 111/332 (33%)
Query: 3 DESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLAT 62
+E W SS+NSL +V K + +DK R+ F + + +I L+ YCA D T
Sbjct: 322 EELWVERSSVNSLRDVAKFHL-NVTIDKAARDDFGQLNRSEILAKLDALLDYCAADVAIT 380
Query: 63 FEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLA 122
V Q + FP FL+ PHPV+ A
Sbjct: 381 HRVYQIV--------------------------------------FPNFLDTCPHPVSFA 402
Query: 123 GMLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHD-DKYKDSLW 181
+ LS+ LPVN +W Y + T++ L+ ++ L+ D+A + D +K+++ W
Sbjct: 403 ALRHLSSVILPVNKSWDAYIANTEATYHRLSDAVQERLVALTDKALEIKDDPEKWQNDPW 462
Query: 182 LWDQDWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRRELVEKFK 241
+ DWS +++++ K K + P R + K
Sbjct: 463 MKQLDWSGQEVRMVKGKKK-------GDPP----------------------RPAARQKK 493
Query: 242 PLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIPGPS 301
P G P+WY+ L K DA P
Sbjct: 494 P----------------GCPQWYKDLFQK-----NDA---------------------PI 511
Query: 302 LISTSMQITPKLLSLTWKSMPLHFIRGHGWGY 333
I+ +I P LL L W PL + +GW +
Sbjct: 512 SITVRTRIAPLLLRLAWDGNPLVWSDKYGWTF 543
>gi|452987079|gb|EME86835.1| hypothetical protein MYCFIDRAFT_186892 [Pseudocercospora fijiensis
CIRAD86]
Length = 1066
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 210/471 (44%), Positives = 277/471 (58%), Gaps = 61/471 (12%)
Query: 431 FIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEISRMLSYWRNNHERVKK 490
+ KLPHKDG +PL++ ++ F + +L+ AK +E++ SYW + +R+
Sbjct: 558 YFKLPHKDGPEARCTSPLAKGYLQFFENGTLSSKYAYAKEALEMNASCSYWISARDRIMS 617
Query: 491 QFVVWLNKKDLPRRLVENIESEGRD-------YGVILPQLIVSGTLTRRAVEATWMTASN 543
Q VV+ ESE RD G ILPQ+I GT+TRRAVE TW+TASN
Sbjct: 618 QMVVY--------------ESENRDTSAEEDGLGYILPQVIPMGTITRRAVENTWLTASN 663
Query: 544 AVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQ 603
A RVGSEL++MI AP GYS +GADVDSQELWIAS++GD+ K HG +G+MTL G
Sbjct: 664 AKKNRVGSELKSMITAPQGYSFVGADVDSQELWIASLVGDA-SFKIHGGNAIGFMTLEGT 722
Query: 604 KSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARK 663
K+ TD+HS TAK +GISR AKI NY RIYGAG +FA+ LL+QFNP +S+ AK A
Sbjct: 723 KAAGTDLHSRTAKILGISRNDAKIFNYGRIYGAGLKFAQSLLRQFNPSLSEEKAKEIATN 782
Query: 664 MYTLTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQWYGGTESAMF 723
+Y TKG K + I D+ W GGTES +F
Sbjct: 783 LYQETKGTK------------------------------SKSKHIRDRQFWRGGTESLVF 812
Query: 724 NRLEEIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLVCMR 783
N+LE+ A +P TP L ++ AL F+ +RINW +QS VD+LHL++V M
Sbjct: 813 NKLEDFAEQERPRTPVLGAGITEALMRRFISKGGFMTSRINWAIQSSGVDYLHLLIVSME 872
Query: 784 WLVSR---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIPLSI 840
+L R D R +++HDEIRYL DE+KY TA+AL V N+ TRA +++ + D+P S
Sbjct: 873 YLCKRYNIDARLALTVHDEIRYLAKDEDKYRTAMALQVANVWTRAMFSQQMGIDDLPQSC 932
Query: 841 SFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKAN 891
++FS V+ID VLRKE D DC TPS+P IP GE LDI Q +DK
Sbjct: 933 AYFSAVDIDHVLRKEVDMDCVTPSHP------TSIPPGESLDIMQLLDKGT 977
Score = 79.7 bits (195), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 84/376 (22%), Positives = 130/376 (34%), Gaps = 122/376 (32%)
Query: 6 WTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLATFEV 65
W +S+NSL +V K +C G +DK R F E + + L+ YCA D T +V
Sbjct: 304 WVGRASVNSLRDVAKFHC-GITIDKARREWFGELDRDGVVEKLEELLDYCAADVEITHKV 362
Query: 66 IQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLAGML 125
+ + PLFLE PHPV+ A + L
Sbjct: 363 YKKVLPLFLETCPHPVSFAALRHL------------------------------------ 386
Query: 126 ELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDK-YKDSLWLWD 184
S LPVN W Y + T++ L+ ++ L+ ++A + + Y++ WL
Sbjct: 387 --SNEILPVNKGWDAYIANAEATYHKLSSAVQERLVGLTEKALEVKEQPEVYRNDPWLSQ 444
Query: 185 QDWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRRELVEKFKPLM 244
DWS +++K+ K K + +P
Sbjct: 445 LDWSGQEIKMVKGKKKG------------------------------------DPLRPAA 468
Query: 245 QTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIPGPSLIS 304
+ K G P+WY+ L S D D +S
Sbjct: 469 RQKK---------PGMPQWYKDLFT---SNDADIN-----------------------LS 493
Query: 305 TSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTDIKVPDA----------ENIPL-EQ 353
++ P LL + W PL + +GW + V +S K DA EN L +
Sbjct: 494 VRTRMAPILLKMAWDGHPLIWSDKYGWSFRVSHSEAQKYRDAAMTQCDMLEEENFALRDD 553
Query: 354 LKQLYNNITKQDNCEA 369
L Y + +D EA
Sbjct: 554 LDHTYFKLPHKDGPEA 569
>gi|67515517|ref|XP_657644.1| hypothetical protein AN0040.2 [Aspergillus nidulans FGSC A4]
gi|40746203|gb|EAA65359.1| hypothetical protein AN0040.2 [Aspergillus nidulans FGSC A4]
gi|259489774|tpe|CBF90322.1| TPA: DNA polymerase gamma (AFU_orthologue; AFUA_5G12640) [Aspergillus
nidulans FGSC A4]
Length = 1134
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 207/462 (44%), Positives = 283/462 (61%), Gaps = 43/462 (9%)
Query: 431 FIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEISRMLSYWRNNHERVKK 490
+ KLPHKDG +PL++ ++ F +L+ AK +E++ SYW + +R+
Sbjct: 579 YFKLPHKDGPTARCVSPLAKGYLQYFERGTLSSQYALAKEALEMNASCSYWISARDRIMG 638
Query: 491 QFVVWLNKKDLPRRLVENIESEGRDYGVILPQLIVSGTLTRRAVEATWMTASNAVGERVG 550
Q VV+ N R + ++ + G ILPQ+I GT+TRRAVE TW+TASNA RVG
Sbjct: 639 QLVVYENDV---RPASPSSKNGDQKLGYILPQIIPMGTITRRAVENTWLTASNAKANRVG 695
Query: 551 SELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDM 610
SEL+AMI+AP GY+ +GADVDSQELWIAS+IGD+ + HG +G+MTL G K+ TDM
Sbjct: 696 SELKAMIKAPPGYAFVGADVDSQELWIASLIGDAQF-QLHGGNAIGFMTLEGSKAAGTDM 754
Query: 611 HSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKG 670
HS TAK +GISR AK+ NY RIYGAG +FA LL+QFNP MS+ + + A K+Y TKG
Sbjct: 755 HSRTAKILGISRNDAKVFNYGRIYGAGVKFAATLLRQFNPSMSERETQEVASKLYKETKG 814
Query: 671 KKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQWYGGTESAMFNRLEEIA 730
K R R+ S D P W GGTES +FN+LEE A
Sbjct: 815 AKTTR-----------RLLS-------------------DNPFWRGGTESFVFNKLEEFA 844
Query: 731 TSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLVCMRWLVSR-- 788
+P TP L ++ AL + F+ +RINW +QS VD+LH++++ M +L+ R
Sbjct: 845 DQERPRTPVLGAGITEALMRRFINRGSFMTSRINWAIQSSGVDYLHMLIIAMDYLIRRFN 904
Query: 789 -DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIPLSISFFSGVE 847
R I++HDEIRYLV +++KY ALAL V+N+ TRA +++ + D+P S ++FS V+
Sbjct: 905 IQARLAITVHDEIRYLVKEQDKYRAALALQVSNVWTRAMFSQQVGINDLPQSCAYFSQVD 964
Query: 848 IDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDK 889
ID VLRKE D DC TPS+P + IP GE L+I Q +DK
Sbjct: 965 IDHVLRKEVDMDCVTPSHP------HKIPHGESLNITQLLDK 1000
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 81/187 (43%), Gaps = 40/187 (21%)
Query: 3 DESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLAT 62
+E W SS+NSL +V K +C+ +DK+ R+ F E I L+ YCA D
Sbjct: 322 EELWVGRSSVNSLRDVAKFHCD-VTIDKSQRDYFGELERPQILAKLDELLDYCAADVAI- 379
Query: 63 FEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLA 122
T V + +F FLE PHPV+
Sbjct: 380 -------------------------------------THRVYKKVFLNFLETCPHPVSFG 402
Query: 123 GMLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHD-DKYKDSLW 181
+ LS+ LPVN W +Y + + T+N +++ L++ CD+A S+ D +KY + W
Sbjct: 403 ALRHLSSVILPVNQTWKEYLDNAESTYNQRLGDVQRRLVELCDEALSVKDDPEKYMNDPW 462
Query: 182 LWDQDWS 188
L DWS
Sbjct: 463 LRQLDWS 469
>gi|344230339|gb|EGV62224.1| hypothetical protein CANTEDRAFT_136159 [Candida tenuis ATCC 10573]
Length = 1312
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 199/465 (42%), Positives = 289/465 (62%), Gaps = 45/465 (9%)
Query: 431 FIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEISRMLSYWRNNHERVKK 490
K+PH DG +S+ + F D +L A+ I++++ SYW N R+ +
Sbjct: 591 LFKIPHPDGNSKRCTAIMSKSYSQYFQDGTLTSEYTYAQEILDLNSTASYWMGNRRRILE 650
Query: 491 QFVVWLNKKDLPRRLVENIESEGR---DYGVILPQLIVSGTLTRRAVEATWMTASNAVGE 547
QFVV+ + + + N + E + D G+ILP+L+ GT+TRRA E TW+TASNA
Sbjct: 651 QFVVYSDPFQ-SKNIFFNTKKESKNHPDMGIILPKLVTMGTITRRATENTWLTASNAKKN 709
Query: 548 RVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNA 607
R+GSEL+++++AP+GY I+GADVDS+ELWIA++IGDS K HG+T L WMTL G K++
Sbjct: 710 RIGSELKSLVEAPEGYVIVGADVDSEELWIAALIGDS-AFKVHGSTALSWMTLEGDKNHG 768
Query: 608 TDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTL 667
TD+HS TA+ +GISR AKI NY RIYGAG +FA LLKQ N ++S +A++ A+K+Y+
Sbjct: 769 TDLHSKTAEILGISRGDAKIFNYGRIYGAGVKFATTLLKQCNNKLSDKEAEAMAKKLYSE 828
Query: 668 TKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQWYGGTESAMFNRLE 727
TKG N K+ + ++GGTES MFN LE
Sbjct: 829 TKG-------------------------------NIGNSKLLKRKLYHGGTESVMFNALE 857
Query: 728 EIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLVCMRWLVS 787
IA P TP L ++ AL + + + F+ +R+NW +QS VD+LHL++V M +L++
Sbjct: 858 SIAQFDDPRTPVLGSSITDALTAKNLNKNNFLTSRVNWAIQSSGVDYLHLLIVSMEYLIN 917
Query: 788 R---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIPLSISFFS 844
+ D R +I++HDE+RYLV +E+KY++AL L ++NL TRA +++L ++P S++FFS
Sbjct: 918 KYKLDARLMITVHDEVRYLVKEEDKYKSALLLQISNLWTRAMFVERLGFNELPQSVAFFS 977
Query: 845 GVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDK 889
V+IDKVLRKE DC TPS P IP GE LDIY+ ++K
Sbjct: 978 EVDIDKVLRKEVTLDCITPSQP------NAIPSGESLDIYKLLEK 1016
Score = 94.4 bits (233), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 82/346 (23%), Positives = 126/346 (36%), Gaps = 115/346 (33%)
Query: 1 MTDESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTL 60
+ D W + S NSL+ V +C G LDK R++F +I ++ NLM YC+ D
Sbjct: 318 LEDNPWLSKGSPNSLASVANFHC-GFKLDKQARDVFSTLEPMEIIEDFDNLMDYCSNDVN 376
Query: 61 ATFEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVT 120
ATFEV + LFP+F E+ PHPV+ A + L + LP T
Sbjct: 377 ATFEVTKKLFPIFKEKAPHPVSFAALKPLGSLMLPTT----------------------- 413
Query: 121 LAGMLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDD------ 174
W Y + + + + ++L D+ ++ +
Sbjct: 414 ---------------KKWDNYLESAEHVYQENRDSVTNILKDRVNELVRFIDTGDEGSRP 458
Query: 175 KYKDSLWLWDQDWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRR 234
K+ W+ DW++K +LK KNGE +
Sbjct: 459 DIKNDPWIGQLDWTIKQPRLK-----------------------KNGEPYAK-------- 487
Query: 235 ELVEKFKPLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSE 294
+YL GYPEWYR+L P AD A ++
Sbjct: 488 -------------------QAYLTGYPEWYRELFKSP--ADSKAGQRE------------ 514
Query: 295 AWIPGPSLISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTD 340
IS +ITP LL L W+ + + +GW + V Y+ +
Sbjct: 515 ------MNISVRTRITPLLLKLKWEGHSIFWTDSNGWCFKVRYNEE 554
>gi|336266172|ref|XP_003347855.1| hypothetical protein SMAC_06688 [Sordaria macrospora k-hell]
gi|380091788|emb|CCC10516.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 1509
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 202/467 (43%), Positives = 277/467 (59%), Gaps = 41/467 (8%)
Query: 431 FIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEISRMLSYWRNNHERVKK 490
+ KLPHKDG NP+++ ++ F L+ AK +E++ SYW + ER+K
Sbjct: 601 YFKLPHKDGPTARCANPMAKGYLAYFEKGILSSEYPYAKEALEMNASCSYWISARERIKN 660
Query: 491 QFVVWLNKKDLPRRLV-ENIESEGRDYGVILPQLIVSGTLTRRAVEATWMTASNAVGERV 549
Q VV+ +K +R + + + G ILPQLI GT+TRRAVE TW+TASNA RV
Sbjct: 661 QMVVYEDKLPPSQRFATKGADDDTPVGGFILPQLIPMGTITRRAVERTWLTASNAKKNRV 720
Query: 550 GSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATD 609
GSEL+AM++AP GY +GADVDS+ELWIASV+GD+ K HG +G+MTL G KS TD
Sbjct: 721 GSELKAMVRAPPGYVFVGADVDSEELWIASVVGDA-TFKLHGGNAIGFMTLEGTKSQGTD 779
Query: 610 MHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTK 669
+HS TA +GI+R AK+ NY RIYGAG +FA +LL+QFNP +++++ + A K+Y TK
Sbjct: 780 LHSRTAAILGITRNDAKVFNYGRIYGAGLKFASQLLRQFNPSLTEAETITIATKLYDATK 839
Query: 670 GKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQWYGGTESAMFNRLEEI 729
G K T+ ++ +P W GGTES +FN LEE
Sbjct: 840 GAK------------------------------TNRKSLYKRPFWRGGTESFVFNMLEEF 869
Query: 730 ATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLVCMRWLVSR- 788
A +P TP L ++ AL F+ +RINW +QS VD+LHL+++ M +L R
Sbjct: 870 AEQERPRTPVLGAGITEALMSRWVSKGGFLTSRINWAIQSSGVDYLHLLIIAMDYLTRRF 929
Query: 789 --DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIPLSISFFSGV 846
R I++HDEIRYL + +KY A+AL + NL TR +++ + D+P S +FFS V
Sbjct: 930 NLACRLTITVHDEIRYLAEEHDKYRVAMALQIANLWTRVMFAQQVGIQDLPQSCAFFSAV 989
Query: 847 EIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKANGV 893
+ID VLRKE D DC TPSNP IP GE +DI+Q +DK
Sbjct: 990 DIDHVLRKEVDMDCITPSNP------VPIPHGESIDIFQLLDKGEAA 1030
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 79/358 (22%), Positives = 132/358 (36%), Gaps = 111/358 (31%)
Query: 6 WTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLATFEV 65
W N SS+NSL +V + + K+ DK R++F E I + +L+TYCA D T +V
Sbjct: 326 WVNKSSINSLRDVAQFHLNVKI-DKEIRDVFAETDRNVILDQLDDLLTYCAADVQVTHQV 384
Query: 66 IQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLAGML 125
Q +FP FL+ PHPV+ A + L
Sbjct: 385 YQVVFPNFLKTCPHPVSFAALRHL------------------------------------ 408
Query: 126 ELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHD-DKYKDSLWLWD 184
S+ LPVN W Y + T+ + ++ L+ ++ +D +KY + WL
Sbjct: 409 --SSVILPVNKTWDHYIETAEATYMQMLHGVQERLLTLMEETLDYKNDPEKYLNDPWLSQ 466
Query: 185 QDWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRRELVEKFKPLM 244
DWS +++K K K+ + +P +
Sbjct: 467 LDWSGQEIKWAKPQKKS------------------------------------DPPRPAL 490
Query: 245 QTKDRLPVNSSYLIGYPEWYRKLCVK----------PHSADKDAVSKQELIHDGISDTSE 294
K L GYP+WY+ L K P ++ ++ E ++
Sbjct: 491 NQK---------LPGYPQWYKDLIPKIPKNLSVIDLPGKEHENRKARHEFVN-------- 533
Query: 295 AWIPGPSLISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTDIKVPDAENIPLE 352
++ ++ P LL L+W+ PL + +GW + VP + P+E
Sbjct: 534 --------LTVRTRVAPLLLKLSWEGYPLFWSDQYGWTFRVPRGEAATFIQRQMTPIE 583
>gi|444320323|ref|XP_004180818.1| hypothetical protein TBLA_0E02450 [Tetrapisispora blattae CBS 6284]
gi|387513861|emb|CCH61299.1| hypothetical protein TBLA_0E02450 [Tetrapisispora blattae CBS 6284]
Length = 1160
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 210/490 (42%), Positives = 294/490 (60%), Gaps = 61/490 (12%)
Query: 407 KKKLAEASSTDTS--TDDADTPREIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGV 464
+K AS TD DD +T K+PH +G LN +S+ F++ F L
Sbjct: 547 EKNYRHASLTDEEELIDDGETV----LFKIPHPNGPELNCTTLMSKPFLHYFDKGILKSR 602
Query: 465 DIGAKRIIEISRMLSYWRNNHERVKKQFVVWLNKKDLPRRLVENIESEGRDYGVILPQLI 524
AK + I+ SYW + ER+ QFVV L + E D G+I+P+LI
Sbjct: 603 SDMAKDALTINASGSYWMSARERIMSQFVVPL-------------QDEKEDVGLIVPKLI 649
Query: 525 VSGTLTRRAVEATWMTASNAVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDS 584
GT+TRRAVE TW+TASNA R+GSEL+AMI AP GYS +GADVDS+ELWIAS++GDS
Sbjct: 650 TMGTVTRRAVENTWLTASNAKNNRIGSELKAMISAPTGYSFVGADVDSEELWIASLVGDS 709
Query: 585 YCAKEHGATPLGWMTLSGQKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERL 644
K HG T +GWM L G K+ TD+H+ TA+ +G +R AK+ NY RIYGAG RFA +L
Sbjct: 710 -VFKLHGGTAIGWMCLEGTKNEGTDLHTKTAEILGCTRNEAKVFNYGRIYGAGVRFASQL 768
Query: 645 LKQFNPEMSKSDAKSKARKMYTLTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTS 704
LK FNP +S D + A+K+Y TKGK IKR
Sbjct: 769 LKNFNPNLSPGDCSAIAKKLYESTKGK-------------IKR----------------- 798
Query: 705 VDKIFDKPQ-WYGGTESAMFNRLEEIATSLQPVTPFLNCRLSRALEPVSED-DSKFIQTR 762
+ F P+ WYGG+ES +FN+LE+IA P TP L C ++++L+ + + ++ ++ +R
Sbjct: 799 -NNKFKFPKFWYGGSESILFNQLEQIAEQPYPRTPVLGCGITKSLQKGNLNANNSYLPSR 857
Query: 763 INWVVQSGAVDFLHLMLVCMRWLVSR---DTRFVISIHDEIRYLVPDEEKYETALALHVT 819
INW +QS VD+LHL++ M +L+ R R I+IHDEIRYLV +E+KY+ A+AL ++
Sbjct: 858 INWCIQSSGVDYLHLLVCSMDYLIQRYQLKARLCITIHDEIRYLVKEEDKYKVAMALQIS 917
Query: 820 NLLTRAFCIKKLDMTDIPLSISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGE 879
NL TR+ +++ + D+P + +FF+ ++ID +LRKE D DC TPSN L +P GE
Sbjct: 918 NLWTRSIFCEQMGIYDLPQNCAFFTAIDIDHILRKEVDMDCVTPSNQDPL-----LPFGE 972
Query: 880 ILDIYQTIDK 889
LDIY+ ++K
Sbjct: 973 SLDIYKLLEK 982
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 79/339 (23%), Positives = 123/339 (36%), Gaps = 123/339 (36%)
Query: 2 TDESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLA 61
+D+ W +SS+NSL +V L+C K ++K R+ F + + +N+ L+ YC
Sbjct: 319 SDDPWLQLSSMNSLKDVAWLHCRIK-MNKDARDYFAALDKQVVIDNFQMLVNYC------ 371
Query: 62 TFEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTL 121
+ D T +V +FP FL++ PHP++
Sbjct: 372 --------------------------------MTDVEVTSKVFDKVFPTFLKQCPHPISF 399
Query: 122 AGMLELSTAYLPVNN-NWVKYFNESCQTFNDLNVEMKSLLMDKCDQACS-LLHDD--KYK 177
A + LS LP NN W Y N S DL K+ DK Q L+ D +
Sbjct: 400 AALRYLSKCILPTNNTGWNDYINRS----EDLYQTSKNKTEDKLIQIVEDLVQKDPADIE 455
Query: 178 DSLWLWDQDWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRRELV 237
+ WL DW K +++ KK
Sbjct: 456 NDPWLSQLDWETKPIRMTKKG--------------------------------------- 476
Query: 238 EKFKPLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWI 297
+PV + L GYPEWY+ L + KD+++ Q
Sbjct: 477 ------------VPVKNQKLPGYPEWYKNLFPR-----KDSLNPQ--------------- 504
Query: 298 PGPSLISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVP 336
I+ +I P L L+W+ P+ + G+GW + VP
Sbjct: 505 -----ITLRTRIIPLLFKLSWEDFPVIWSDGNGWCFRVP 538
>gi|328851794|gb|EGG00945.1| hypothetical protein MELLADRAFT_39474 [Melampsora larici-populina
98AG31]
Length = 1150
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 213/493 (43%), Positives = 286/493 (58%), Gaps = 73/493 (14%)
Query: 426 PREIG------FIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDI--------GAKRI 471
PR +G + KLPH G+ NVG+PL + F F + L GA+
Sbjct: 526 PRFVGDQSDAVYFKLPHPSGDEENVGSPLGKSFDLAFENGVLQATPFKKDDLPTSGAREA 585
Query: 472 IEISRMLSYWRNNHERVKKQFVVW----------LNKKDLPRRLVENIESEGRDYGVILP 521
+ ++ SYW N +R+K Q VVW L + P L E +E E R G+ILP
Sbjct: 586 VSMNMQCSYWLNASQRIKTQMVVWRPEESKKKIELGTQMSPTSL-ERLEPEKRKQGIILP 644
Query: 522 QLIVSGTLTRRAVEATWMTASNAVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVI 581
Q+ V GT+TRRA E TW+ A+NA ++G+EL++M++AP GY+I+GADVDS+ELWI+SV+
Sbjct: 645 QVTVMGTVTRRATEKTWLAAANAKKNKIGTELKSMVRAPPGYAIVGADVDSEELWISSVM 704
Query: 582 GDSYCAKEHGATPLGWMTLSGQKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFA 641
GD+ HGAT +GWMTL G KS TD+HS TA +GISR AK+ NY+RIYGAG A
Sbjct: 705 GDAQFGM-HGATAIGWMTLEGTKSAGTDLHSKTATILGISRNEAKVFNYSRIYGAGVTHA 763
Query: 642 ERLLKQFNPEMSKSDAKSKARKMYTLTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAY 701
+LL + +P+ SK +A A+K+Y TKG K YR
Sbjct: 764 IQLLMKADPKTSKEEANQLAKKLYRSTKGLKNYR-------------------------- 797
Query: 702 NTSVDKIFDKPQWYGGTESAMFNRLEEIATSLQPVTPFLNCRLSRALEPVS--------E 753
+IF++ WYGGTES +FN+LEEIA +P TP L C ++RAL +
Sbjct: 798 ----SEIFERRFWYGGTESFLFNKLEEIALDDEPKTPALGCGITRALRKAHLPTKSVGID 853
Query: 754 DDSKFIQTRINWVVQSGAVDFLHLMLVCMRWLVSR---DTRFVISIHDEIRYLVPDEEKY 810
F+ +R+NW VQS VD+LHL++V M +L+ R R++IS+HDEIRYL E++Y
Sbjct: 854 GGPDFMTSRVNWAVQSSGVDYLHLLIVAMDYLIDRYGIQARYMISVHDEIRYLSVWEDRY 913
Query: 811 ETALALHVTNLLTRAFCIKKLDMTDIPLSISFFSGVEIDKVLRKESDNDCKTPSNPYGLC 870
T LAL + NL TR KL+M D+P S ++FS V++D VLRKE D C TPSNP
Sbjct: 914 RTGLALQIANLWTRCQFAFKLEMDDLPQSCAWFSAVDVDHVLRKEVDLSCVTPSNP---- 969
Query: 871 KGYGIPLGEILDI 883
IP GE LDI
Sbjct: 970 --NPIPPGESLDI 980
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 57/91 (62%), Gaps = 1/91 (1%)
Query: 5 SWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLATFE 64
SWT+VSS+NSL +V +L+C G LDK+ RN F+ I + L+ YC+ D AT
Sbjct: 277 SWTDVSSMNSLDQVARLHC-GIQLDKSTRNAFLSWDRPQIVAHLSQLLDYCSVDVSATHA 335
Query: 65 VIQALFPLFLERFPHPVTLAGMLELSTAYLP 95
V L P+FLE+ PHPV+ AGML + +LP
Sbjct: 336 VFSKLLPIFLEQCPHPVSFAGMLHMGNPFLP 366
>gi|164655431|ref|XP_001728845.1| hypothetical protein MGL_4012 [Malassezia globosa CBS 7966]
gi|159102731|gb|EDP41631.1| hypothetical protein MGL_4012 [Malassezia globosa CBS 7966]
Length = 1518
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 211/493 (42%), Positives = 293/493 (59%), Gaps = 57/493 (11%)
Query: 418 TSTDDADTPREIG-FIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDI------GAKR 470
T + ADT G F KLPH +G+ NVGNP S+ F+ F + L + A+
Sbjct: 809 TFSHAADTALSQGIFYKLPHVNGDGSNVGNPFSKGFLPYFENGRLRSLHPSEQSAEAARA 868
Query: 471 IIEISRMLSYWRNNHERVKKQFVVWLNKKDLPRRLVENIESEGRDYGVILPQLIVSGTLT 530
+E++ SYW + +R++KQ VVW + D + G+ILPQ+I GT+T
Sbjct: 869 ALEMNAQCSYWISARDRIEKQMVVWDGEADT----CMGFDDTQMRRGMILPQVITMGTVT 924
Query: 531 RRAVEATWMTASNAVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEH 590
RRA+E TW+TASNA R+GSEL++M++A G+SI+GADVDS+ELWI SV+GD+ H
Sbjct: 925 RRAIEKTWLTASNAKKNRIGSELKSMVKASPGWSIVGADVDSEELWICSVMGDAQFGI-H 983
Query: 591 GATPLGWMTLSGQKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNP 650
GAT +GWMTL G K+ TD+HS TA +G SR+ AK+ NY+RIYGAG R A +LL + NP
Sbjct: 984 GATAIGWMTLEGSKAQGTDLHSKTASILGTSRDQAKVFNYSRIYGAGIRHAMQLLLKANP 1043
Query: 651 EMSKSDAKSKARKMYTLTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFD 710
M +A +A+++Y TKG+ NT K F
Sbjct: 1044 SMPVDEASRRAKQLYAATKGQ------------------------------NTRSQKYFG 1073
Query: 711 KPQWYGGTESAMFNRLEEIATSLQPVTPFLNCRLSRALE----PVSEDDSK--FIQTRIN 764
+ WYGGTES +FN+LEEIA S QP TP L+C ++ AL P + ++ ++ +RIN
Sbjct: 1074 RRFWYGGTESFVFNKLEEIALSEQPRTPALDCGITAALSKQFLPKTRGSAQQDYMPSRIN 1133
Query: 765 WVVQSGAVDFLHLMLVCMRWLVSR---DTRFVISIHDEIRYLVPDEEKYETALALHVTNL 821
WVVQS VD+LHL++ M L + RF++S+HDE+RYL D +KY ALAL + NL
Sbjct: 1134 WVVQSSGVDYLHLLITSMTHLCKTYDIEARFMLSVHDEVRYLARDSDKYRAALALQIANL 1193
Query: 822 LTRAFCIKKLDMTDIPLSISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEIL 881
TR+ KL+M D+P S +FF+ V+ID VLRKE D+ C TPS + I GE L
Sbjct: 1194 WTRSMFAFKLNMGDVPESCAFFAAVDIDHVLRKEVDDPCVTPS------QWEPIEPGESL 1247
Query: 882 DIYQTIDKANGVI 894
DI+ +++ NG +
Sbjct: 1248 DIHTILERTNGSL 1260
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 72/145 (49%), Gaps = 13/145 (8%)
Query: 6 WTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEG-SLEDIENNWHNLMTYCAKDTLATFE 64
W +V+S NSL++V L+C G +DK R++F+ S E++ L+ YCA D F
Sbjct: 447 WQDVTSQNSLADVAALHC-GIHVDKGIRDVFLSSTSREEVAAQLPLLLAYCASDVSTAFS 505
Query: 65 VIQALFPLFLERFPHPVTLAGMLELSTAYLP----------DTLATFEVIQALFPLFLER 114
V ++P F PHP TLAG+L L + +LP A F+ + A L++
Sbjct: 506 VFTKVWPAFRRNCPHPATLAGVLGLGSTFLPLDATWTNYQQQAKAKFDEMNANVVTTLKK 565
Query: 115 FPHPVTLAGMLELSTAY-LPVNNNW 138
+ + AG+ ++ A P + W
Sbjct: 566 LTYDLVEAGIQDIDRASETPAKDRW 590
>gi|405118258|gb|AFR93032.1| gamma DNA-directed DNA polymerase [Cryptococcus neoformans var.
grubii H99]
Length = 1433
Score = 380 bits (976), Expect = e-102, Method: Compositional matrix adjust.
Identities = 212/480 (44%), Positives = 291/480 (60%), Gaps = 63/480 (13%)
Query: 431 FIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGA---------KRIIEISRMLSYW 481
+ +LPHKDGE NVGNPLS+ F+ LA + ++ SYW
Sbjct: 921 YFRLPHKDGEGKNVGNPLSKGFVKFIESGELASAAAESGDDVAAKAAADATNMNAFCSYW 980
Query: 482 RNNHERVKKQFVVWLNKKDLPRRLVENIESEGRDYGVILPQLIVSGTLTRRAVEATWMTA 541
++ ER+ Q VV+ ++ ++G+ILPQ+I GT+TRRAVEATW+TA
Sbjct: 981 ISSRERIMDQMVVYRDQ----------------EFGMILPQVITMGTVTRRAVEATWLTA 1024
Query: 542 SNAVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLS 601
SNA RVGSEL+AM++AP GYSI+GADVDS+ELWI+SV+GDS HGAT +GWMTL
Sbjct: 1025 SNAKKNRVGSELKAMVRAPPGYSIVGADVDSEELWISSVMGDSQFGM-HGATAIGWMTLE 1083
Query: 602 GQKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKA 661
G KS TD+HS TA +GISR+ AK+ NY+RIYGAG++ A +LL Q + +++K A A
Sbjct: 1084 GTKSAGTDLHSKTANILGISRDAAKVFNYSRIYGAGKKHAVQLLLQGDSKLTKETAGKLA 1143
Query: 662 RKMYTLTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQWYGGTESA 721
+Y TKG K R AR + A S+ W+GG+ES
Sbjct: 1144 DNLYKSTKGAKAVR------------------ARNLPVASIPSL--------WHGGSESY 1177
Query: 722 MFNRLEEIATSLQPVTPFLNCRLSRAL-EPVSEDDSKFIQTRINWVVQSGAVDFLHLMLV 780
+FN LE IA S +P TP L C ++RAL + E+++ ++ +R+NWVVQS VD+LHL++V
Sbjct: 1178 LFNTLEAIALSDRPTTPALGCGVTRALRKSYLEENASYLPSRVNWVVQSSGVDYLHLLIV 1237
Query: 781 CMRWLVSR---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIP 837
M +L+ + R++IS+HDE+RYL +E++Y TALAL + N TRA L + D+P
Sbjct: 1238 SMEYLIKKYNIQARYLISVHDEVRYLAKEEDRYRTALALQIANAWTRALFCFNLGIDDMP 1297
Query: 838 LSISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDK-ANGVIGT 896
I+FFS V+ID VLRKE C+TPS+P IP GE LDI ++K G +GT
Sbjct: 1298 QGITFFSAVDIDHVLRKEVFLTCETPSHP------KVIPAGESLDIISLLEKIPRGDLGT 1351
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/333 (20%), Positives = 125/333 (37%), Gaps = 119/333 (35%)
Query: 6 WTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLATFEV 65
W +V+S+NSL+EV L+C V +N H L++YCA D T +V
Sbjct: 474 WEDVTSMNSLAEVAALHCGYPV-----------------DNELHQLLSYCADDVRVTHDV 516
Query: 66 IQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLAGML 125
+FPLFLE PHP TL+G+L + +
Sbjct: 517 YAKVFPLFLESCPHPATLSGILSMGS---------------------------------- 542
Query: 126 ELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDKYKDSLWLWDQ 185
++LP++ +W +Y + +T+ +++V +K L ++ + + K W
Sbjct: 543 ----SFLPIDQSWKEYLRNAEETYREMDVAVKKALRLLAEKLRA--EGEPKKGDPWASQL 596
Query: 186 DWSVKDLKLKKKANKTLSVDQETE-EPEEFYEINKNGEDQTEDEFVKRRRELVEKFKPLM 244
DWS K+ + +++ L Q+ +P E + K G +
Sbjct: 597 DWSPKNARW---SDEDLEGTQKNSMQPRESAQPRKLGFSSSASS---------------- 637
Query: 245 QTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIPGPSLIS 304
P W ++ HS K +S++ L+
Sbjct: 638 ----------------PAWLTQISSN-HSVLKSNMSQRYLL------------------- 661
Query: 305 TSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPY 337
P +L +++K P+ ++ HGW ++VP+
Sbjct: 662 ------PLVLRMSFKGHPVAYLSEHGWCFMVPH 688
>gi|115387355|ref|XP_001211183.1| DNA polymerase gamma [Aspergillus terreus NIH2624]
gi|114195267|gb|EAU36967.1| DNA polymerase gamma [Aspergillus terreus NIH2624]
Length = 1131
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 206/466 (44%), Positives = 280/466 (60%), Gaps = 49/466 (10%)
Query: 431 FIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEISRMLSYWRNNHERVKK 490
+ KLPHKDG NPL++ ++ F +L+ AK +E++ SYW + +R+
Sbjct: 579 YFKLPHKDGPQARCINPLAKGYMQYFERGTLSSQYALAKEALEMNASCSYWISARDRIMS 638
Query: 491 QFVVWLNKKDLPRRLVENIES--EGRDYGVILPQLIVSGTLTRRAVEATWMTASNAVGER 548
Q VV+ ++ V N++ +G G ILPQ+I GT+TRRAVE TW+TASNA R
Sbjct: 639 QMVVYQDE-------VGNVQPNDDGSRIGFILPQIIPMGTITRRAVENTWLTASNAKENR 691
Query: 549 VGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNAT 608
VGSEL+AMI+AP GY +GADVDSQELWIAS+IGD+ + HG +G+MTL G K+ T
Sbjct: 692 VGSELKAMIKAPPGYVFVGADVDSQELWIASLIGDAQF-QIHGGNAIGFMTLEGSKAAGT 750
Query: 609 DMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLT 668
DMHS TA +GISR AK+ NY RIYGAG +FA LL+QFNP M++ + + A +Y T
Sbjct: 751 DMHSRTAHILGISRNDAKVFNYGRIYGAGVKFAATLLRQFNPSMTERETQEVASNLYKET 810
Query: 669 KGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQWYGGTESAMFNRLEE 728
KG + R R+ S + P W GGTES +FN+LEE
Sbjct: 811 KGTRTTR-----------RILS-------------------EGPFWRGGTESFVFNKLEE 840
Query: 729 IATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLVCMRWLVSR 788
A +P TP L ++ AL + F+ +RINW +QS VD+LHL++V M +L+ R
Sbjct: 841 FAEQERPRTPTLGAGITEALMRRFINKGSFMTSRINWAIQSSGVDYLHLLIVAMDYLIRR 900
Query: 789 ---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIPLSISFFSG 845
R I++HDEIRYLV DE+KY ALAL V N+ TRA +++ + D+P S ++FS
Sbjct: 901 FNIQARLAITVHDEIRYLVKDEDKYRAALALQVANVWTRAMFSQQVGINDLPQSCAYFSA 960
Query: 846 VEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKAN 891
V+ID VLRKE + DC TPS+P + IP GE +DI Q + K
Sbjct: 961 VDIDHVLRKEVNMDCVTPSHP------HKIPHGETVDITQLLQKGQ 1000
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 82/190 (43%), Gaps = 40/190 (21%)
Query: 3 DESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLAT 62
+E W SS+NSL +V K +C+ +DK R+ F E E I L+ YCA D T
Sbjct: 322 EELWVGRSSVNSLRDVAKFHCD-VTIDKAQRDYFGELDREGILGKLEELLDYCAADVAIT 380
Query: 63 FEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLA 122
V + + FP FLE PHPV+
Sbjct: 381 HRVYKKV--------------------------------------FPNFLEVCPHPVSFG 402
Query: 123 GMLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLL-HDDKYKDSLW 181
+ LS+ LPVN +W +Y + T++ +++ L++ CD+A + H + Y + W
Sbjct: 403 ALRHLSSVILPVNKSWQEYLTNAEATYHQRLEDVQRKLVELCDEALKVKDHPEVYMNDPW 462
Query: 182 LWDQDWSVKD 191
L DWS ++
Sbjct: 463 LRQLDWSGQE 472
>gi|134108716|ref|XP_777011.1| hypothetical protein CNBB5370 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50259694|gb|EAL22364.1| hypothetical protein CNBB5370 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 1453
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 212/480 (44%), Positives = 290/480 (60%), Gaps = 63/480 (13%)
Query: 431 FIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGA---------KRIIEISRMLSYW 481
+ +LPHKDGE NVGNPLS+ F+ LA + ++ SYW
Sbjct: 940 YFRLPHKDGEGKNVGNPLSKGFVKAIESGELASAAAESGDDVAAKAAADATNMNAFCSYW 999
Query: 482 RNNHERVKKQFVVWLNKKDLPRRLVENIESEGRDYGVILPQLIVSGTLTRRAVEATWMTA 541
++ ER+ Q VV+ ++ ++G+ILPQ+I GT+TRRAVEATW+TA
Sbjct: 1000 ISSRERIMDQMVVYRDQ----------------EFGMILPQVITMGTVTRRAVEATWLTA 1043
Query: 542 SNAVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLS 601
SNA RVGSEL+AM++AP GYSI+G+DVDS+ELWI+SV+GDS HGAT +GWMTL
Sbjct: 1044 SNAKKNRVGSELKAMVRAPPGYSIVGSDVDSEELWISSVMGDSQFGM-HGATAIGWMTLE 1102
Query: 602 GQKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKA 661
G KS TD+HS TA +GISR+ AK+ NY+RIYGAG++ A +LL Q + +++K A A
Sbjct: 1103 GNKSAGTDLHSKTASILGISRDAAKVFNYSRIYGAGKKHAVQLLLQGDSKLTKETAGKLA 1162
Query: 662 RKMYTLTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQWYGGTESA 721
+Y TKG K R AR + A S+ W+GG+ES
Sbjct: 1163 DNLYKSTKGAKALR------------------ARNLPVASVPSL--------WHGGSESY 1196
Query: 722 MFNRLEEIATSLQPVTPFLNCRLSRAL-EPVSEDDSKFIQTRINWVVQSGAVDFLHLMLV 780
+FN LE IA S +P TP L C ++RAL + E+ + ++ +R+NWVVQS VD+LHL++V
Sbjct: 1197 LFNTLEAIALSDRPTTPALGCGVTRALRKSYLEESASYLPSRVNWVVQSSGVDYLHLLIV 1256
Query: 781 CMRWLVSR---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIP 837
M +L+ + R++IS+HDE+RYL +E++Y TALAL V N TRA L + D+P
Sbjct: 1257 SMEYLIKKYDIKARYLISVHDEVRYLAKEEDRYRTALALQVANAWTRALFCFNLGIDDMP 1316
Query: 838 LSISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKA-NGVIGT 896
I+FFS V+ID VLRKE C+TPS+P IP GE LDI ++K G +GT
Sbjct: 1317 QGITFFSAVDIDHVLRKEVFLTCETPSHP------KVIPAGESLDINSLLEKVPRGDLGT 1370
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/338 (23%), Positives = 138/338 (40%), Gaps = 110/338 (32%)
Query: 6 WTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLE---DIENNWHNLMTYCAKDTLAT 62
W +V+S+NSL+EV L+C G +DK+ R+ F + S++ I + H L++YCA D T
Sbjct: 474 WEDVTSMNSLAEVAALHC-GYPVDKSVRDRFGDDSIKHASQIHSELHQLLSYCADDVRVT 532
Query: 63 FEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLA 122
+V +FPLFLE PHP TL+G+L + +
Sbjct: 533 HDVYAKVFPLFLESCPHPATLSGVLSMGS------------------------------- 561
Query: 123 GMLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKS---LLMDKCDQACSLLHDDKYKDS 179
++LPV+ +W +Y + +T+ +++V +K LL +K D +
Sbjct: 562 -------SFLPVDQSWKEYLRNAEETYREMDVAVKKALRLLAEKLRAEGEPKEGDPWASQ 614
Query: 180 LWLWDQDWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRRELVEK 239
L DWS K+ + + + + + + +P+E + +K G
Sbjct: 615 L-----DWSPKNARWSDEDLE--ATGKHSVQPQESAQPHKPG------------------ 649
Query: 240 FKPLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIPG 299
NS P W ++ HS K +S++ L+
Sbjct: 650 ------------FNSG--ASSPTWLTQISSN-HSILKSNMSQRYLL-------------- 680
Query: 300 PSLISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPY 337
P LL +++K P+ ++ HGW ++VP+
Sbjct: 681 -----------PLLLRMSFKGHPVAYLSEHGWCFMVPH 707
>gi|296809768|ref|XP_002845222.1| DNA polymerase gamma [Arthroderma otae CBS 113480]
gi|238842610|gb|EEQ32272.1| DNA polymerase gamma [Arthroderma otae CBS 113480]
Length = 1133
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 218/511 (42%), Positives = 301/511 (58%), Gaps = 56/511 (10%)
Query: 393 KSAKRLEVIANVLDKKKLAEASSTDTSTDDADTPREIG---FIKLPHKDGEHLNVGNPLS 449
K A EV N + + + +S D S + RE + KLPHKDG +PLS
Sbjct: 536 KHAWTFEVPRNEIKRYEEQAFTSCDMSEETNPALREDKEHVYFKLPHKDGPDARCASPLS 595
Query: 450 RDFINKFSDNSLAGVDIGAKRIIEISRMLSYWRNNHERVKKQFVVWLNKKDLPRRLVENI 509
+ ++ F L+ AK +E++ SYW + +R+ Q VV+ KKDL E
Sbjct: 596 KGYLQYFESGKLSSQFPLAKEALEMNASCSYWISARDRITSQMVVY--KKDL-----EKA 648
Query: 510 ESEGRDY------GVILPQLIVSGTLTRRAVEATWMTASNAVGERVGSELRAMIQAPDGY 563
ES G+ G ILPQ+I GT+TRRAVE TW+TASNA RVGSEL+AM++AP GY
Sbjct: 649 ESSGKGLSSNSKLGFILPQVIPMGTITRRAVENTWLTASNAKPNRVGSELKAMVRAPPGY 708
Query: 564 SIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMHSITAKAVGISRE 623
+GADVDS+ELWIAS++GD+ + HG +G+MTL G K+ TD+HS TAK +GISR
Sbjct: 709 VFVGADVDSEELWIASLVGDAQF-QLHGGNAIGFMTLEGTKAAGTDLHSKTAKILGISRN 767
Query: 624 HAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKGKKLYRLKDGHLEE 683
+AK+ NY RIYGAG +FA LL+QFNP MS+++ K+ A K+Y TKG + R
Sbjct: 768 NAKVFNYGRIYGAGLKFAATLLRQFNPSMSEAETKAVAAKLYKETKGTRTTR-------- 819
Query: 684 LIKRVYSKYEAREVCSAYNTSVDKIFDKPQWYGGTESAMFNRLEEIATSLQPVTPFLNCR 743
R+ S + P GGTES +FN+LEE A +P TP L
Sbjct: 820 ---RMLS-------------------ENPFLRGGTESFVFNKLEEFAEQERPRTPVLGAG 857
Query: 744 LSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLVCMRWLVSR---DTRFVISIHDEI 800
++ AL + F+ +RINW +QS VD+LHL+++ M +L+ R D R I++HDEI
Sbjct: 858 ITEALMRRFINKGSFMTSRINWAIQSSGVDYLHLLIISMDYLIRRFNLDARLAITVHDEI 917
Query: 801 RYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIPLSISFFSGVEIDKVLRKESDNDC 860
RY+V + +KY+ A+AL V NL TRA +++ + D+P S +FFS V+ID VLRKE + DC
Sbjct: 918 RYVVKETDKYKAAMALQVANLWTRAMFSQQMGIDDLPQSCAFFSAVDIDHVLRKEVNLDC 977
Query: 861 KTPSNPYGLCKGYGIPLGEILDIYQTIDKAN 891
TPS+P IP GE LDI++ + K +
Sbjct: 978 VTPSHP------NKIPHGESLDIHELLSKGD 1002
Score = 85.1 bits (209), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 80/337 (23%), Positives = 124/337 (36%), Gaps = 115/337 (34%)
Query: 3 DESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLAT 62
+E W SS+NSL +V K +C +DK RN F E I L+ YCA D T
Sbjct: 320 EELWVGRSSINSLRDVAKFHC-NITIDKAQRNYFGELDRAGINERLDELLDYCAADVAIT 378
Query: 63 FEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLA 122
V + +FP FLE PHPV+ A + L
Sbjct: 379 HRVYKKVFPNFLETCPHPVSFAALRHL--------------------------------- 405
Query: 123 GMLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDK---YKDS 179
S+ LPVN W +Y + +T++ ++ L++ C+ A + DK Y++
Sbjct: 406 -----SSVILPVNETWEEYLKNAEETYHRALDSVQKRLVELCEAALKV--KDKPEIYQND 458
Query: 180 LWLWDQDWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRRELVEK 239
WL DWS +++++ K K G+
Sbjct: 459 PWLRQLDWSGQEIRMVKG--------------------KKKGD----------------- 481
Query: 240 FKPLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIPG 299
P + +LP G P+WY+ L TS++ I
Sbjct: 482 -PPRPAARQKLP-------GMPKWYKDLF----------------------PTSKSNIN- 510
Query: 300 PSLISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVP 336
I+ +++P LL+L+W PL + H W + VP
Sbjct: 511 ---ITVRTRVSPILLNLSWDGFPLVWSDKHAWTFEVP 544
>gi|403167889|ref|XP_003327622.2| hypothetical protein PGTG_09156 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375167243|gb|EFP83203.2| hypothetical protein PGTG_09156 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 1435
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 209/503 (41%), Positives = 289/503 (57%), Gaps = 74/503 (14%)
Query: 431 FIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDI------------------------ 466
F K+PH DG+ NVG+PLS+ F F + L +
Sbjct: 822 FFKVPHPDGDSENVGSPLSKSFDKAFENEVLRANPLCIDHSSANLLSDSAHVTLKAADSH 881
Query: 467 ----GAKRIIEISRMLSYWRNNHERVKKQFVVWLNKKDLPRRLVENIESEGRDYGVILPQ 522
A++ + +S SYW N +R+K Q V+W + LP+ +N E G+ILPQ
Sbjct: 882 ALADNARQALSMSMQCSYWLNASQRIKDQMVIW--ESSLPQENSDNPEPSRCKQGLILPQ 939
Query: 523 LIVSGTLTRRAVEATWMTASNAVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIG 582
+ V GT+TRRA E TW+ A+NA ++G+EL++MI+AP GY+I+GADVDS+ELWI+SV+G
Sbjct: 940 VTVMGTITRRATEKTWLAAANAKKNKIGTELKSMIRAPPGYAIVGADVDSEELWISSVMG 999
Query: 583 DSYCAKEHGATPLGWMTLSGQKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAE 642
D+ HGAT +GWMTL G K TD+HS TA +GISR AK+ NY+RIYGAG A
Sbjct: 1000 DAQFGM-HGATAIGWMTLEGTKVAGTDLHSKTASILGISRNDAKVFNYSRIYGAGIAHAV 1058
Query: 643 RLLKQFNPEMSKSDAKSKARKMYTLTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYN 702
+LL + +P SK++A A+++Y TKG K YR
Sbjct: 1059 QLLMKADPTASKTEATKLAKQLYASTKGVKNYRAD------------------------- 1093
Query: 703 TSVDKIFDKPQWYGGTESAMFNRLEEIATSLQPVTPFLNCRLSRALE----PVSEDDSKF 758
+F++ WYGGTES +FN+LE+IA + P TP LNC ++RAL P + + F
Sbjct: 1094 -----MFERKFWYGGTESYLFNKLEQIALAEYPETPALNCGITRALRKCHLPSAGEGPDF 1148
Query: 759 IQTRINWVVQSGAVDFLHLMLVCMRWLVSR---DTRFVISIHDEIRYLVPDEEKYETALA 815
+ +R+NW VQS VD+LH+++V M +L R D R++IS+HDEIRYL E++Y ALA
Sbjct: 1149 MTSRVNWAVQSSGVDYLHMLIVAMDYLTDRYGIDARYMISVHDEIRYLSAWEDRYRCALA 1208
Query: 816 LHVTNLLTRAFCIKKLDMTDIPLSISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGI 875
L + NL TR KL+M D+P S ++FS V++D VLRKE D C TPSNP I
Sbjct: 1209 LQIANLWTRCQFAFKLEMDDLPQSCAWFSAVDVDHVLRKEVDLSCVTPSNP------DPI 1262
Query: 876 PLGEILDIYQTIDKANGVIGTFK 898
P GE LDI + + +G K
Sbjct: 1263 PPGESLDINKLLQVTPMGLGELK 1285
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 48/94 (51%), Positives = 61/94 (64%), Gaps = 1/94 (1%)
Query: 2 TDESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLA 61
T SWT+V+S+NSL EV KL+C G +DKT RNIF+E I + L+ YCA+D A
Sbjct: 329 TQTSWTDVASMNSLEEVAKLHC-GIQVDKTLRNIFLENDKSQIVRHIPQLLEYCARDVSA 387
Query: 62 TFEVIQALFPLFLERFPHPVTLAGMLELSTAYLP 95
T V L PLFLE+ PHPV+ AGML + +LP
Sbjct: 388 THAVYCKLLPLFLEQCPHPVSFAGMLHMGNPFLP 421
>gi|58262724|ref|XP_568772.1| gamma DNA-directed DNA polymerase [Cryptococcus neoformans var.
neoformans JEC21]
gi|57223422|gb|AAW41465.1| gamma DNA-directed DNA polymerase, putative [Cryptococcus neoformans
var. neoformans JEC21]
Length = 1376
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 212/480 (44%), Positives = 290/480 (60%), Gaps = 63/480 (13%)
Query: 431 FIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGA---------KRIIEISRMLSYW 481
+ +LPHKDGE NVGNPLS+ F+ LA + ++ SYW
Sbjct: 863 YFRLPHKDGEGKNVGNPLSKGFVKAIESGELASAAAESGDDVAAKAAADATNMNAFCSYW 922
Query: 482 RNNHERVKKQFVVWLNKKDLPRRLVENIESEGRDYGVILPQLIVSGTLTRRAVEATWMTA 541
++ ER+ Q VV+ ++ ++G+ILPQ+I GT+TRRAVEATW+TA
Sbjct: 923 ISSRERIMDQMVVYRDQ----------------EFGMILPQVITMGTVTRRAVEATWLTA 966
Query: 542 SNAVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLS 601
SNA RVGSEL+AM++AP GYSI+G+DVDS+ELWI+SV+GDS HGAT +GWMTL
Sbjct: 967 SNAKKNRVGSELKAMVRAPPGYSIVGSDVDSEELWISSVMGDSQFGM-HGATAIGWMTLE 1025
Query: 602 GQKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKA 661
G KS TD+HS TA +GISR+ AK+ NY+RIYGAG++ A +LL Q + +++K A A
Sbjct: 1026 GNKSAGTDLHSKTASILGISRDAAKVFNYSRIYGAGKKHAVQLLLQGDSKLTKETAGKLA 1085
Query: 662 RKMYTLTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQWYGGTESA 721
+Y TKG K R AR + A S+ W+GG+ES
Sbjct: 1086 DNLYKSTKGAKALR------------------ARNLPVASVPSL--------WHGGSESY 1119
Query: 722 MFNRLEEIATSLQPVTPFLNCRLSRAL-EPVSEDDSKFIQTRINWVVQSGAVDFLHLMLV 780
+FN LE IA S +P TP L C ++RAL + E+ + ++ +R+NWVVQS VD+LHL++V
Sbjct: 1120 LFNTLEAIALSDRPTTPALGCGVTRALRKSYLEESASYLPSRVNWVVQSSGVDYLHLLIV 1179
Query: 781 CMRWLVSR---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIP 837
M +L+ + R++IS+HDE+RYL +E++Y TALAL V N TRA L + D+P
Sbjct: 1180 SMEYLIKKYDIKARYLISVHDEVRYLAKEEDRYRTALALQVANAWTRALFCFNLGIDDMP 1239
Query: 838 LSISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKA-NGVIGT 896
I+FFS V+ID VLRKE C+TPS+P IP GE LDI ++K G +GT
Sbjct: 1240 QGITFFSAVDIDHVLRKEVFLTCETPSHP------KVIPAGESLDINSLLEKVPRGDLGT 1293
Score = 87.8 bits (216), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 78/338 (23%), Positives = 138/338 (40%), Gaps = 110/338 (32%)
Query: 6 WTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLE---DIENNWHNLMTYCAKDTLAT 62
W +V+S+NSL+EV L+C G +DK+ R+ F + S++ I + H L++YCA D T
Sbjct: 397 WEDVTSMNSLAEVAALHC-GYPVDKSVRDRFGDDSIKHASQIHSELHQLLSYCADDVRVT 455
Query: 63 FEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLA 122
+V +FPLFLE PHP TL+G+L + +
Sbjct: 456 HDVYAKVFPLFLESCPHPATLSGVLSMGS------------------------------- 484
Query: 123 GMLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKS---LLMDKCDQACSLLHDDKYKDS 179
++LPV+ +W +Y + +T+ +++V +K LL +K D +
Sbjct: 485 -------SFLPVDQSWKEYLRNAEETYREMDVAVKKALRLLAEKLRAEGEPKEGDPWASQ 537
Query: 180 LWLWDQDWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRRELVEK 239
L DWS K+ + + + + + + +P+E + +K G
Sbjct: 538 L-----DWSPKNARWSDEDLE--ATGKHSVQPQESAQPHKPG------------------ 572
Query: 240 FKPLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIPG 299
NS P W ++ HS K +S++ L+
Sbjct: 573 ------------FNSG--ASSPTWLTQISSN-HSILKSNMSQRYLL-------------- 603
Query: 300 PSLISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPY 337
P LL +++K P+ ++ HGW ++VP+
Sbjct: 604 -----------PLLLRMSFKGHPVAYLSEHGWCFMVPH 630
>gi|164428985|ref|XP_957747.2| DNA polymerase gamma [Neurospora crassa OR74A]
gi|166214919|sp|Q9Y767.2|DPOG_NEUCR RecName: Full=DNA polymerase gamma, mitochondrial; AltName:
Full=Mitochondrial DNA polymerase catalytic subunit;
Flags: Precursor
gi|157072364|gb|EAA28511.2| DNA polymerase gamma [Neurospora crassa OR74A]
Length = 1456
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 198/465 (42%), Positives = 280/465 (60%), Gaps = 41/465 (8%)
Query: 431 FIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEISRMLSYWRNNHERVKK 490
+ KLPHKDG + NP+++ ++ F L+ AK +E++ SYW + ER+K
Sbjct: 601 YFKLPHKDGPNARCVNPMAKGYLPYFEKGILSSEYPYAKEALEMNASCSYWISARERIKN 660
Query: 491 QFVVWLNKKDLPRRLV-ENIESEGRDYGVILPQLIVSGTLTRRAVEATWMTASNAVGERV 549
Q VV+ ++ +R V ++ +S G +LPQ+I GT+TRRAVE TW+TASNA RV
Sbjct: 661 QMVVYEDQLPPSQRFVNKDADSNTPIGGFVLPQVIPMGTITRRAVERTWLTASNAKKNRV 720
Query: 550 GSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATD 609
GSEL+AM++AP GY +GADVDS+ELWIASV+GD+ K HG +G+MTL G KS TD
Sbjct: 721 GSELKAMVRAPPGYVFVGADVDSEELWIASVVGDA-TFKLHGGNAIGFMTLEGTKSQGTD 779
Query: 610 MHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTK 669
+HS TA +GI+R AK+ NY RIYGAG +FA +LL+QFNP +++++ + A K+Y TK
Sbjct: 780 LHSRTASILGITRNDAKVFNYGRIYGAGLKFASQLLRQFNPSLTEAETTAIATKLYDATK 839
Query: 670 GKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQWYGGTESAMFNRLEEI 729
G K T+ ++ +P W GGTES +FN LEE
Sbjct: 840 GAK------------------------------TNRKSLYKRPFWRGGTESFVFNMLEEF 869
Query: 730 ATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLVCMRWLVSR- 788
A +P TP L ++ AL F+ +RINW +QS VD+LHL+++ M +L R
Sbjct: 870 AEQERPRTPVLGAGITEALMSRWVSKGGFLTSRINWAIQSSGVDYLHLLIIAMDYLTRRF 929
Query: 789 --DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIPLSISFFSGV 846
R I++HDEIRYL + +KY A+AL + NL TR +++ + D+P S +FFS V
Sbjct: 930 NLACRLAITVHDEIRYLAEEPDKYRVAMALQIANLWTRVMFAQQVGIQDLPQSCAFFSAV 989
Query: 847 EIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKAN 891
+ID VLRKE D DC TPSNP + GE +DI+Q ++K +
Sbjct: 990 DIDHVLRKEVDMDCITPSNPIPIAH------GESIDIFQILEKGD 1028
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/342 (23%), Positives = 126/342 (36%), Gaps = 111/342 (32%)
Query: 6 WTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLATFEV 65
W + SS+NSL +V + + K+ DK R++F E I N +L+TYCA D T +V
Sbjct: 326 WVDKSSINSLRDVAQFHLNVKI-DKDIRDVFAETDRNVILNQLDDLLTYCAADVQVTHQV 384
Query: 66 IQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLAGML 125
Q +FP FL PHPV+ A + L
Sbjct: 385 YQVVFPNFLGVCPHPVSFAALRHL------------------------------------ 408
Query: 126 ELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHD-DKYKDSLWLWD 184
++ LPVN W Y + T+ + ++ L ++ D +KY WL
Sbjct: 409 --ASVILPVNKTWDTYIETAEATYLQMLHGVQERLFTLMERTLDYKADPEKYLSDPWLSQ 466
Query: 185 QDWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRRELVEKFKPLM 244
DWS +++K+ K K G+ VE+
Sbjct: 467 LDWSGQEIKMAKP--------------------KKKGD--------------VER----- 487
Query: 245 QTKDRLPVNSSYLIGYPEWYRKLCVK----------PHSADKDAVSKQELIHDGISDTSE 294
P + L GYP+WY+ L VK P ++ ++ E I+
Sbjct: 488 ------PALNQKLPGYPQWYKDLFVKVPKELSGLDEPDKEQENRKARHEFIN-------- 533
Query: 295 AWIPGPSLISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVP 336
++ +I P LL L+W+ PL + GW + VP
Sbjct: 534 --------LTVRSRIAPLLLKLSWEGYPLFWSDQFGWTFQVP 567
>gi|451998068|gb|EMD90533.1| hypothetical protein COCHEDRAFT_1179441 [Cochliobolus heterostrophus
C5]
Length = 1144
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 200/464 (43%), Positives = 275/464 (59%), Gaps = 40/464 (8%)
Query: 430 GFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEISRMLSYWRNNHERVK 489
+ K+PHKDG NPL++ ++ F L AK +E++ SYW + +R+
Sbjct: 579 AYYKIPHKDGPLARCTNPLAKGYLQYFEKGKLGSEYGYAKEALEMNASCSYWISARDRIM 638
Query: 490 KQFVVWLNKKDLPRRLVENIESEGRDYGVILPQLIVSGTLTRRAVEATWMTASNAVGERV 549
Q VV+ + +L + G G ILPQ+I GT+TRR+VE TW+TASNA RV
Sbjct: 639 SQMVVYNKEATNAPKLTSSSAKTGGKVGFILPQIIPMGTITRRSVENTWLTASNAKKNRV 698
Query: 550 GSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATD 609
GSEL++M++AP GY +GADVDSQELWIAS+IGD+ K HG +G+MTL G K+ TD
Sbjct: 699 GSELKSMVRAPKGYCFVGADVDSQELWIASLIGDA-TFKLHGGNAVGFMTLEGTKAAGTD 757
Query: 610 MHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTK 669
+HS TA +GISR AK+ NY RIYGAG +FA LL+QFNP ++ ++ A +Y TK
Sbjct: 758 LHSRTASILGISRNDAKVFNYGRIYGAGLQFASTLLRQFNPSLTDAETSKTANDLYQNTK 817
Query: 670 GKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQWYGGTESAMFNRLEEI 729
GKK T+ + ++P W GGTES +FNRLE+
Sbjct: 818 GKK------------------------------TTRKVLRERPFWRGGTESFVFNRLEDF 847
Query: 730 ATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLVCMRWLVSR- 788
A +P TP L ++ AL+ F+ +RINW +QS VD+LHL++V M +L R
Sbjct: 848 AEQERPRTPVLGAAITEALQRRYLSKGGFMTSRINWAIQSSGVDYLHLLIVSMDYLTRRY 907
Query: 789 --DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIPLSISFFSGV 846
D R I++HDEIRYLV D++KY+ A+AL V N+ TRA +++ + ++P S ++FS V
Sbjct: 908 NLDCRLAITVHDEIRYLVKDKDKYKAAMALQVANVWTRAMFAQQMGINELPQSCAYFSAV 967
Query: 847 EIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKA 890
+ID+VLRKE D DC TPSN IP GE LDI +DK
Sbjct: 968 DIDRVLRKEVDMDCITPSN------KEAIPHGESLDIMALLDKG 1005
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 81/335 (24%), Positives = 123/335 (36%), Gaps = 111/335 (33%)
Query: 3 DESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLAT 62
+E W S++NSL +V + +C +DK R F E + + L+ YCA D T
Sbjct: 323 EELWMGRSAINSLRDVAQFHCN-ITIDKAKREYFGELDRAGVRDMLDELLNYCAADVEIT 381
Query: 63 FEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLA 122
V Q +FPLFLE PHPV+ A + RF
Sbjct: 382 HRVYQKVFPLFLETCPHPVSFAAL---------------------------RF------- 407
Query: 123 GMLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLL-HDDKYKDSLW 181
L+ LPV+ W Y N + T++ L+ +K L+ ++A + + Y + W
Sbjct: 408 ----LAAEILPVDETWDAYINNAEATYHRLDNGVKERLVALTEKALEVKDQPNVYNNDPW 463
Query: 182 LWDQDWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRRELVEKFK 241
L DWS +++K+ K ++ + P R + K
Sbjct: 464 LSQLDWSGQEVKMVKGK-------KKGDPP----------------------RPAARQKK 494
Query: 242 PLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIPGPS 301
P G P+WY+ L K SD GP
Sbjct: 495 P----------------GMPKWYKDLFTK-------------------SD-------GPM 512
Query: 302 LISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVP 336
++ ++TP LL L W PL + +GW Y VP
Sbjct: 513 NLTVRTRLTPILLRLAWDGHPLVWSDKYGWTYRVP 547
>gi|4455007|gb|AAD21034.1| DNA polymerase gamma [Neurospora crassa]
Length = 1305
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 198/465 (42%), Positives = 280/465 (60%), Gaps = 41/465 (8%)
Query: 431 FIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEISRMLSYWRNNHERVKK 490
+ KLPHKDG + NP+++ ++ F L+ AK +E++ SYW + ER+K
Sbjct: 601 YFKLPHKDGPNARCVNPMAKGYLPYFEKGILSSEYPYAKEALEMNASCSYWISARERIKN 660
Query: 491 QFVVWLNKKDLPRRLV-ENIESEGRDYGVILPQLIVSGTLTRRAVEATWMTASNAVGERV 549
Q VV+ ++ +R V ++ +S G +LPQ+I GT+TRRAVE TW+TASNA RV
Sbjct: 661 QMVVYEDQLPPSQRFVNKDADSNTPIGGFVLPQVIPMGTITRRAVERTWLTASNAKKNRV 720
Query: 550 GSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATD 609
GSEL+AM++AP GY +GADVDS+ELWIASV+GD+ K HG +G+MTL G KS TD
Sbjct: 721 GSELKAMVRAPPGYVFVGADVDSEELWIASVVGDA-TFKLHGGNAIGFMTLEGTKSQGTD 779
Query: 610 MHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTK 669
+HS TA +GI+R AK+ NY RIYGAG +FA +LL+QFNP +++++ + A K+Y TK
Sbjct: 780 LHSRTASILGITRNDAKVFNYGRIYGAGLKFASQLLRQFNPSLTEAETTAIATKLYDATK 839
Query: 670 GKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQWYGGTESAMFNRLEEI 729
G K T+ ++ +P W GGTES +FN LEE
Sbjct: 840 GAK------------------------------TNRKSLYKRPFWRGGTESFVFNMLEEF 869
Query: 730 ATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLVCMRWLVSR- 788
A +P TP L ++ AL F+ +RINW +QS VD+LHL+++ M +L R
Sbjct: 870 AEQERPRTPVLGAGITEALMSRWVSKGGFLTSRINWAIQSSGVDYLHLLIIAMDYLTRRF 929
Query: 789 --DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIPLSISFFSGV 846
R I++HDEIRYL + +KY A+AL + NL TR +++ + D+P S +FFS V
Sbjct: 930 NLACRLAITVHDEIRYLAEEPDKYRVAMALQIANLWTRVMFAQQVGIQDLPQSCAFFSAV 989
Query: 847 EIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKAN 891
+ID VLRKE D DC TPSNP + GE +DI+Q ++K +
Sbjct: 990 DIDHVLRKEVDMDCITPSNPIPIAH------GESIDIFQILEKGD 1028
Score = 87.8 bits (216), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 81/342 (23%), Positives = 126/342 (36%), Gaps = 111/342 (32%)
Query: 6 WTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLATFEV 65
W + SS+NSL +V + + K+ DK R++F E I N +L+TYCA D T +V
Sbjct: 326 WVDKSSINSLRDVAQFHLNVKI-DKDIRDVFAETDRNVILNQLDDLLTYCAADVQVTHQV 384
Query: 66 IQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLAGML 125
Q +FP FL PHPV+ A + L
Sbjct: 385 YQVVFPNFLGVCPHPVSFAALRHL------------------------------------ 408
Query: 126 ELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHD-DKYKDSLWLWD 184
++ LPVN W Y + T+ + ++ L ++ D +KY WL
Sbjct: 409 --ASVILPVNKTWDTYIETAEATYLQMLHGVQERLFTLMERTLDYKADPEKYLSDPWLSQ 466
Query: 185 QDWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRRELVEKFKPLM 244
DWS +++K+ K K G+ VE+
Sbjct: 467 LDWSGQEIKMAKP--------------------KKKGD--------------VER----- 487
Query: 245 QTKDRLPVNSSYLIGYPEWYRKLCVK----------PHSADKDAVSKQELIHDGISDTSE 294
P + L GYP+WY+ L VK P ++ ++ E I+
Sbjct: 488 ------PALNQKLPGYPQWYKDLFVKVPKELSGLDEPDKEQENRKARHEFIN-------- 533
Query: 295 AWIPGPSLISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVP 336
++ +I P LL L+W+ PL + GW + VP
Sbjct: 534 --------LTVRSRIAPLLLKLSWEGYPLFWSDQFGWTFQVP 567
>gi|350290508|gb|EGZ71722.1| DNA polymerase gamma [Neurospora tetrasperma FGSC 2509]
Length = 1466
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 200/465 (43%), Positives = 280/465 (60%), Gaps = 41/465 (8%)
Query: 431 FIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEISRMLSYWRNNHERVKK 490
+ KLPHKDG + NP+++ ++ F L+ AK +E++ SYW + ER+K
Sbjct: 601 YFKLPHKDGPNARCVNPMAKGYLPYFEKGILSSEYPYAKEALEMNASCSYWISARERIKN 660
Query: 491 QFVVWLNKKDLPRRLV-ENIESEGRDYGVILPQLIVSGTLTRRAVEATWMTASNAVGERV 549
Q VV+ ++ +R V ++ +S G +LPQ+I GT+TRRAVE TW+TASNA RV
Sbjct: 661 QMVVYEDQLPPSQRFVNKDADSNTPIGGFVLPQVIPMGTITRRAVERTWLTASNAKKNRV 720
Query: 550 GSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATD 609
GSEL+AM++AP GY +GADVDS+ELWIASV+GD+ K HG +G+MTL G KS TD
Sbjct: 721 GSELKAMVRAPPGYVFVGADVDSEELWIASVVGDA-TFKLHGGNAIGFMTLEGTKSQGTD 779
Query: 610 MHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTK 669
+HS TA +GI+R AK+ NY RIYGAG +FA +LL+QFNP +++++ + A K+Y TK
Sbjct: 780 LHSRTASILGITRNDAKVFNYGRIYGAGLKFASQLLRQFNPSLTEAETTAIATKLYDATK 839
Query: 670 GKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQWYGGTESAMFNRLEEI 729
G K R + L KR + W GGTES +FN LEE
Sbjct: 840 GAKTNR------KSLYKRSF------------------------WRGGTESFVFNMLEEF 869
Query: 730 ATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLVCMRWLVSR- 788
A +P TP L ++ AL F+ +RINW +QS VD+LHL+++ M +L R
Sbjct: 870 AEQERPRTPVLGAGITEALMSRWVSKGGFLTSRINWAIQSSGVDYLHLLIIAMDYLTRRF 929
Query: 789 --DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIPLSISFFSGV 846
R I++HDEIRYL + +KY A+AL + NL TR +++ + D+P S +FFS V
Sbjct: 930 NLACRLAITVHDEIRYLAEEHDKYRVAMALQIANLWTRVMFAQQVGIQDLPQSCAFFSAV 989
Query: 847 EIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKAN 891
+ID VLRKE D DC TPSNP + GE +DI+Q ++K +
Sbjct: 990 DIDHVLRKEVDMDCITPSNPIPIAH------GESIDIFQILEKGD 1028
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 83/339 (24%), Positives = 129/339 (38%), Gaps = 105/339 (30%)
Query: 6 WTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLATFEV 65
W + SS+NSL +V + + K+ DK R++F E I N +L+TYCA D T +V
Sbjct: 326 WVDKSSINSLRDVAQFHLNVKI-DKDIRDVFAETDRNVILNQLDDLLTYCAADVQVTHQV 384
Query: 66 IQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLAGML 125
Q +FP FL PHPV+ A + L
Sbjct: 385 YQVVFPNFLGVCPHPVSFAALRHL------------------------------------ 408
Query: 126 ELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHD-DKYKDSLWLWD 184
++ LPVN W Y + T+ + ++ L ++ D +KY WL
Sbjct: 409 --ASVILPVNKTWDTYIETAEATYLQMLHGVQERLFTLMERTLDYKADPEKYLSDPWLSQ 466
Query: 185 QDWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRRELVEKFKPLM 244
DWS +++K+ K K G+ VE+
Sbjct: 467 LDWSGQEIKMAKP--------------------KKKGD--------------VER----- 487
Query: 245 QTKDRLPVNSSYLIGYPEWYRKLCVK-PH------SADKDAVSKQELIHDGISDTSEAWI 297
P + L GYP+WY+ L +K P DK+ +++ HD I+
Sbjct: 488 ------PALNQKLPGYPQWYKDLFIKVPKELSGLDEPDKEQENRKAR-HDFIN------- 533
Query: 298 PGPSLISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVP 336
++ +I P LL L+W+ PL + GW + VP
Sbjct: 534 -----LTVRSRIAPLLLKLSWEGYPLFWSDQFGWTFQVP 567
>gi|344300039|gb|EGW30379.1| hypothetical protein SPAPADRAFT_157322 [Spathaspora passalidarum NRRL
Y-27907]
Length = 1289
Score = 377 bits (969), Expect = e-101, Method: Compositional matrix adjust.
Identities = 199/457 (43%), Positives = 284/457 (62%), Gaps = 37/457 (8%)
Query: 431 FIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEISRMLSYWRNNHERVKK 490
K+PH DG + LS++FI F + +L A+ I+ ++ SYW N R+ +
Sbjct: 600 LFKIPHPDGAGKRCTSVLSKNFIQYFENGTLTSEFEYAREIMTLNNEASYWMGNRNRIME 659
Query: 491 QFVVWLNKKDLPRRLV-ENIESEGRDYGVILPQLIVSGTLTRRAVEATWMTASNAVGERV 549
QFVV+ +K+ L + I E ++ G+I+P L GT+TRRA E TW+TASNA R+
Sbjct: 660 QFVVF-SKEGLNNFFPNKEIRKEHKNMGIIIPMLATMGTITRRATENTWLTASNAKKNRI 718
Query: 550 GSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATD 609
GSEL+++I+AP GY +GADVDS+ELWIAS++GDS + HG T LGWMTL G+KS TD
Sbjct: 719 GSELKSLIEAPQGYCFVGADVDSEELWIASLVGDS-MFQTHGGTALGWMTLEGEKSQKTD 777
Query: 610 MHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTK 669
+HS TA +GISR AK+ NY RIYGAG FA RLLKQFN ++S +DA++ A+K+Y TK
Sbjct: 778 LHSKTASILGISRNDAKVFNYGRIYGAGVTFATRLLKQFNKDISDNDAETMAKKLYASTK 837
Query: 670 GKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQWYGGTESAMFNRLEEI 729
G+ SKY K F+ ++GG+ES MFN LE I
Sbjct: 838 GQ------------------SKY-------------SKHFNGKLYFGGSESIMFNALEAI 866
Query: 730 ATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLVCMRWLVSR- 788
A +P TP L ++ AL + + ++ +R+NW +QS VD+LHL++V M +L+
Sbjct: 867 AQQEEPRTPVLGASITDALNAKNLKKNNYMTSRVNWTIQSSGVDYLHLLIVAMDYLIEEY 926
Query: 789 --DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIPLSISFFSGV 846
D R +I++HDE+RYLV +E+KY+ AL L + N+ TRA ++L + ++P S +FFS V
Sbjct: 927 KVDARLMITVHDELRYLVKEEDKYKVALLLQIANVWTRAMFCEQLGIKEVPQSCAFFSEV 986
Query: 847 EIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDI 883
+ID VLRKE DC TPSNP + KG + + ++L+I
Sbjct: 987 DIDHVLRKEVGMDCVTPSNPNPIPKGESLDIRKLLEI 1023
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/348 (22%), Positives = 125/348 (35%), Gaps = 121/348 (34%)
Query: 2 TDESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLA 61
+++ W + NSL+ V + +C G +DKTDR+ F +++ +N+H LM YCA+D A
Sbjct: 330 SEDPWLKKGAPNSLANVAEFHC-GIKMDKTDRDYFASEDPQEVIDNFHKLMDYCARDVEA 388
Query: 62 TFEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTL 121
T+ V + LFP F +R PHPV+
Sbjct: 389 TYI--------------------------------------VTKKLFPEFRQRVPHPVSF 410
Query: 122 AGMLELSTAYLPVNNNWVKYFNESCQTFNDLNVE--MKSL------LMDKCDQACSLLHD 173
A + + + LP W KY ES + N E +SL L++ ++ L
Sbjct: 411 AALRHMGSLILPTTTKWNKYI-ESANSHYYANREKVTESLKQRAVELVEYIEKQDDNLMP 469
Query: 174 DKYKDSLWLWDQDWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRR 233
D D WL +W +K ++K K+G + F
Sbjct: 470 DHESDP-WLSQLNWEIKQPRMK-----------------------KDGTPWSRQAF---- 501
Query: 234 RELVEKFKPLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTS 293
+ GYPEWYR L K + ++
Sbjct: 502 -----------------------MTGYPEWYRDLFKKEKGNEDREMN------------- 525
Query: 294 EAWIPGPSLISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTDI 341
++ + P L L W+ P+ ++ GW + VPY+ DI
Sbjct: 526 ---------LTLRTRTAPLFLRLKWEGYPIFWVDSQGWCFKVPYNADI 564
>gi|451845516|gb|EMD58828.1| hypothetical protein COCSADRAFT_128402 [Cochliobolus sativus ND90Pr]
Length = 1148
Score = 377 bits (969), Expect = e-101, Method: Compositional matrix adjust.
Identities = 200/464 (43%), Positives = 275/464 (59%), Gaps = 40/464 (8%)
Query: 430 GFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEISRMLSYWRNNHERVK 489
+ K+PHKDG NPL++ ++ F L AK +E++ SYW + +R+
Sbjct: 579 AYYKIPHKDGPLARCTNPLAKGYLQYFEKGKLGSEYAYAKEALEMNASCSYWISARDRIM 638
Query: 490 KQFVVWLNKKDLPRRLVENIESEGRDYGVILPQLIVSGTLTRRAVEATWMTASNAVGERV 549
Q VV+ + RLV + G G ILPQ+I GT+TRR+VE TW+TASNA RV
Sbjct: 639 SQMVVYNKEATNAPRLVSSSAKTGGKVGFILPQIIPMGTITRRSVENTWLTASNAKKNRV 698
Query: 550 GSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATD 609
GSEL++M++AP GY +GADVDSQELWIAS+IGD+ K HG +G+MTL G K+ TD
Sbjct: 699 GSELKSMVRAPKGYCFVGADVDSQELWIASLIGDA-TFKLHGGNAVGFMTLEGTKAAGTD 757
Query: 610 MHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTK 669
+HS TA +GISR AK+ NY RIYGAG +FA LL+QFNP ++ ++ A +Y TK
Sbjct: 758 LHSRTASILGISRNDAKVFNYGRIYGAGLQFASTLLRQFNPSLTDAETSKTANDLYQNTK 817
Query: 670 GKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQWYGGTESAMFNRLEEI 729
GKK T+ + ++P W GGTES +FNRLE+
Sbjct: 818 GKK------------------------------TTRKVLRERPFWRGGTESFVFNRLEDF 847
Query: 730 ATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLVCMRWLV--- 786
A +P TP L ++ AL+ F+ +RINW +QS VD+LHL++V M +L
Sbjct: 848 AEQERPRTPVLGAAITEALQRRYLSKGGFMTSRINWAIQSSGVDYLHLLIVSMDYLTRLY 907
Query: 787 SRDTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIPLSISFFSGV 846
+ D R I++HDEIRYLV D++KY+ A+AL V N+ TRA +++ + ++P S ++FS V
Sbjct: 908 NLDCRLAITVHDEIRYLVKDKDKYKAAMALQVANVWTRAMFAQQMGINELPQSCAYFSAV 967
Query: 847 EIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKA 890
+ID VLRKE D DC TPSN IP GE LDI ++K
Sbjct: 968 DIDHVLRKEVDMDCITPSN------KEAIPHGESLDIMALLEKG 1005
Score = 79.3 bits (194), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 81/335 (24%), Positives = 124/335 (37%), Gaps = 111/335 (33%)
Query: 3 DESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLAT 62
+E W S++NSL +V + +C +DK R F E + + L+ YCA D
Sbjct: 323 EELWMGRSAINSLRDVAQFHC-NITIDKAKREYFGELDRAGVRDMLDELLDYCAAD---- 377
Query: 63 FEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLA 122
+E+ T V Q +FPLFLE PHPV+ A
Sbjct: 378 ------------------------VEI----------THRVYQKVFPLFLETCPHPVSFA 403
Query: 123 GMLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLL-HDDKYKDSLW 181
+ L+ LPVN W Y N + T++ L+ +K L+ ++A + D Y + W
Sbjct: 404 ALRFLAAEILPVNETWDAYINNAEATYHKLDNGVKERLIALTEKALEVKDQPDVYNNDPW 463
Query: 182 LWDQDWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRRELVEKFK 241
L DWS +++K+ K ++ + P R + K
Sbjct: 464 LSQLDWSGQEVKMVKGK-------KKGDPP----------------------RPAARQKK 494
Query: 242 PLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIPGPS 301
P G P+WY+ L K +DG P
Sbjct: 495 P----------------GMPKWYKDLFTK---------------NDG-----------PL 512
Query: 302 LISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVP 336
++ ++TP LL L W PL + +GW Y VP
Sbjct: 513 NLTVRTRLTPILLRLAWDGHPLVWSDKYGWTYRVP 547
>gi|327292550|ref|XP_003230973.1| DNA polymerase gamma [Trichophyton rubrum CBS 118892]
gi|326466779|gb|EGD92232.1| DNA polymerase gamma [Trichophyton rubrum CBS 118892]
Length = 1137
Score = 377 bits (969), Expect = e-101, Method: Compositional matrix adjust.
Identities = 208/469 (44%), Positives = 285/469 (60%), Gaps = 43/469 (9%)
Query: 427 REIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEISRMLSYWRNNHE 486
RE + KLPHKDG +PLS+ ++ F L+ AK +E++ SYW + +
Sbjct: 578 REHVYFKLPHKDGPDARCASPLSKGYLQYFESGKLSSQFPLAKEALEMNASCSYWISARD 637
Query: 487 RVKKQFVVWLNKKDLPRRLVENIE-SEGRDYGVILPQLIVSGTLTRRAVEATWMTASNAV 545
R+ Q VV+ KKDL + E S G ILPQ+I GT+TRRAVE TW+TASNA
Sbjct: 638 RITSQMVVY--KKDLEKTGALGKELSPDSKVGFILPQVIPMGTITRRAVENTWLTASNAK 695
Query: 546 GERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKS 605
RVGSEL+AM++AP GY +GADVDS+ELWIAS++GD+ + HG +G+MTL G K+
Sbjct: 696 PNRVGSELKAMVRAPPGYVFVGADVDSEELWIASLVGDAQF-QLHGGNAIGFMTLEGTKA 754
Query: 606 NATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMY 665
TD+HS TAK +GISR +AK+ NY RIYGAG +FA LL+QFNP MS+++ K+ A K+Y
Sbjct: 755 AGTDLHSKTAKILGISRNNAKVFNYGRIYGAGLKFAATLLRQFNPSMSETETKAVAAKLY 814
Query: 666 TLTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQWYGGTESAMFNR 725
TKG + R R+ S + P GGTES +FN+
Sbjct: 815 KETKGTRTTR-----------RILS-------------------ENPFLRGGTESFVFNK 844
Query: 726 LEEIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLVCMRWL 785
LEE A +P TP L ++ AL + F+ +RINW +QS VD+LHL+++ M +L
Sbjct: 845 LEEFAEQERPRTPVLGAGITEALMRRFINKGGFMTSRINWAIQSSGVDYLHLLIISMDYL 904
Query: 786 VSR---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIPLSISF 842
+ R D R I++HDEIRY+V + +KY+ A+AL V NL TRA +++ + D+P S +F
Sbjct: 905 IRRFNLDARLAITVHDEIRYVVRETDKYKAAMALQVANLWTRAMFSQQMGIDDLPQSCAF 964
Query: 843 FSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKAN 891
FS V+ID VLRKE + DC TPS+P IP GE LDI + + K +
Sbjct: 965 FSAVDIDHVLRKEVNMDCVTPSHP------NKIPHGESLDINELLSKGD 1007
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/337 (24%), Positives = 124/337 (36%), Gaps = 115/337 (34%)
Query: 3 DESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLAT 62
+E W SS+NSL +V K +C +DK RN F E E I L+ YCA D T
Sbjct: 325 EELWVGRSSVNSLRDVAKFHC-NITIDKAQRNYFGELDREGINGQLDELLDYCAADVAIT 383
Query: 63 FEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLA 122
V + +FP FLE PHPV+ A + LS
Sbjct: 384 HRVYKKVFPNFLETCPHPVSFAALRHLS-------------------------------- 411
Query: 123 GMLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDK---YKDS 179
T LPVN W +Y + T++ ++ L++ C+ A + DK Y++
Sbjct: 412 ------TVILPVNETWGEYLKNAEDTYHRALDNVQKRLVELCENALKV--KDKPEIYQND 463
Query: 180 LWLWDQDWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRRELVEK 239
WL DWS +++++ K K G+
Sbjct: 464 PWLRQLDWSGQEIRMVKG--------------------KKKGD----------------- 486
Query: 240 FKPLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIPG 299
P + +LP G P+WY+ L SK ++
Sbjct: 487 -PPRPAARQKLP-------GMPKWYKDLF---------PTSKSDIN-------------- 515
Query: 300 PSLISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVP 336
I+ +I+P LL+L+W PL + HGW + VP
Sbjct: 516 ---ITVRTRISPILLNLSWDGFPLVWSDKHGWTFEVP 549
>gi|358396350|gb|EHK45731.1| hypothetical protein TRIATDRAFT_219391 [Trichoderma atroviride IMI
206040]
Length = 1146
Score = 377 bits (969), Expect = e-101, Method: Compositional matrix adjust.
Identities = 204/464 (43%), Positives = 284/464 (61%), Gaps = 46/464 (9%)
Query: 431 FIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEISRMLSYWRNNHERVKK 490
+ KLPHKDG NP+++ ++N F + +L+ AK +E++ SYW + +R+
Sbjct: 579 YFKLPHKDGPTARCANPMAKGYLNYFENGTLSSEYEYAKEALEMNASCSYWMSARDRIMS 638
Query: 491 QFVVWLNKKDLPRR---LVENIESEGRDYGVILPQLIVSGTLTRRAVEATWMTASNAVGE 547
Q VV+ +KDLP +V + E G ILPQ++ GT+TRRAVE TW+TASNA
Sbjct: 639 QMVVY--EKDLPETAEGMVAKKDGENTQ-GFILPQIVPMGTITRRAVENTWLTASNAKKN 695
Query: 548 RVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNA 607
RVGSEL++M++AP GY +GADVDS+ELWIAS++GD+ K HG +G+MTL G K+
Sbjct: 696 RVGSELKSMVKAPAGYCFVGADVDSEELWIASLVGDA-TFKIHGGNAIGFMTLEGTKAAG 754
Query: 608 TDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTL 667
TD+HS TA +GISR AKI NY RIYGAG +FA LL+QFNP++S+++ A+++Y
Sbjct: 755 TDLHSRTASILGISRNQAKIFNYGRIYGAGLKFAATLLRQFNPKLSEAETTEIAQRLYAN 814
Query: 668 TKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQWYGGTESAMFNRLE 727
TKG K R + + KR++ W GGTES +FN+LE
Sbjct: 815 TKGIKTNR------KTINKRLF------------------------WRGGTESFVFNKLE 844
Query: 728 EIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLVCMRWLVS 787
E A TP L +++AL ++ +RINW +QS VD+LHL++V M +L+
Sbjct: 845 EFAEQDWARTPVLGAGITQALMSRFVSKGGYLPSRINWAIQSSGVDYLHLLIVSMDYLIR 904
Query: 788 R---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIPLSISFFS 844
R D R IS+HDE+RYLV E+KY+ ALAL V N+ TRA +++ + D+P S +FFS
Sbjct: 905 RFNLDARLAISVHDEVRYLVKSEDKYKAALALQVANIWTRAMFAQQVGINDLPQSCAFFS 964
Query: 845 GVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTID 888
++ID VLRKE D DC TPS+P IP GE LDI +D
Sbjct: 965 AIDIDHVLRKEVDMDCITPSHP------DAIPPGESLDIQTLLD 1002
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 75/334 (22%), Positives = 117/334 (35%), Gaps = 111/334 (33%)
Query: 3 DESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLAT 62
+E W SS+NSL +V K + +DK R+ F E + + L+ YCA D T
Sbjct: 323 EELWVEKSSINSLRDVAKFHL-NVTIDKKIRDDFGELDRDGVLEKLDQLLEYCAADVSVT 381
Query: 63 FEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLA 122
V QA+ P FLE PHPV+ A + L
Sbjct: 382 HRVYQAILPNFLEVCPHPVSFAALRHL--------------------------------- 408
Query: 123 GMLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLL-HDDKYKDSLW 181
S+ LPVN+ W Y + T+ L+ + L+ ++A + + + +++ W
Sbjct: 409 -----SSVILPVNDTWDSYIANAEATYQKLSASVHERLVALAEKALEIKDYPEIWQNDPW 463
Query: 182 LWDQDWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRRELVEKFK 241
+ DWS +++++ K K + P R + K
Sbjct: 464 MNQLDWSGQEIRMVKGKRK-------ADPP----------------------RPAARQKK 494
Query: 242 PLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIPGPS 301
P G P+WY+ L A DA P
Sbjct: 495 P----------------GMPKWYKDLF-----ATNDA---------------------PI 512
Query: 302 LISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLV 335
+S +I P LL L W PL + +GW + V
Sbjct: 513 NLSIRTRIAPLLLKLAWDGHPLFWSHQYGWVFRV 546
>gi|258567122|ref|XP_002584305.1| DNA polymerase gamma [Uncinocarpus reesii 1704]
gi|237905751|gb|EEP80152.1| DNA polymerase gamma [Uncinocarpus reesii 1704]
Length = 1140
Score = 377 bits (969), Expect = e-101, Method: Compositional matrix adjust.
Identities = 205/465 (44%), Positives = 282/465 (60%), Gaps = 45/465 (9%)
Query: 431 FIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEISRMLSYWRNNHERVKK 490
+ KLPHKDG +P+++ ++ F L+ AK +E++ SYW + +R+ +
Sbjct: 583 YYKLPHKDGPDARCASPVAKGYLQYFEGGKLSSQFALAKEALEMNASCSYWISARDRIAR 642
Query: 491 QFVVWLNKKDLPRRLV--ENIESEGRDYGVILPQLIVSGTLTRRAVEATWMTASNAVGER 548
Q VV+ KD+ RRL E ++ G ILPQ+I GT+TRRAVE TW+TASNA R
Sbjct: 643 QIVVY--DKDV-RRLSGDEIPQNRSSHLGFILPQIIPMGTITRRAVENTWLTASNAKANR 699
Query: 549 VGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNAT 608
VGSEL+AM++AP GY+ +GADVDS+ELWIAS++GD+ + HG +G+MTL G K+ T
Sbjct: 700 VGSELKAMVKAPPGYAFVGADVDSEELWIASLVGDAQF-QIHGGNAIGFMTLEGTKAAGT 758
Query: 609 DMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLT 668
D+HS TAK +GISR +AK+ NY RIYGAG +FA LL+QFNP +S+ + K A +Y T
Sbjct: 759 DLHSKTAKILGISRNNAKVFNYGRIYGAGLKFAATLLRQFNPSISEEETKLIASNLYRET 818
Query: 669 KGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQWYGGTESAMFNRLEE 728
KG + R I + P W GGTES +FN+LEE
Sbjct: 819 KGTRTMR------------------------------KMISESPFWRGGTESFVFNKLEE 848
Query: 729 IATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLVCMRWLVSR 788
A +P TP L ++ AL + F+ +RINW +QS VD+LHL++V M +L+ R
Sbjct: 849 FADQERPRTPVLGAGITEALMRRFINKGSFMTSRINWAIQSSGVDYLHLLIVSMDFLIRR 908
Query: 789 ---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIPLSISFFSG 845
D R IS+HDEIRYLV +E+KY A+AL V N+ TRA +++ + D+P S ++FS
Sbjct: 909 FNIDARLAISVHDEIRYLVKEEDKYRAAMALQVANVWTRAMFSQQMGIDDLPQSCAYFSA 968
Query: 846 VEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKA 890
V+ID VLRKE D DC TPS+P IP GE +DI Q + K
Sbjct: 969 VDIDHVLRKEVDMDCVTPSHP------QKIPPGESVDIEQLLLKG 1007
Score = 89.4 bits (220), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 82/337 (24%), Positives = 118/337 (35%), Gaps = 115/337 (34%)
Query: 3 DESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLAT 62
+E W SS+NSL +V K +C +DK R+ F E E I L+ YCA D T
Sbjct: 326 EELWVGRSSINSLRDVAKFHC-NITIDKAQRDYFGELDREGIRARLDELLDYCAADVSIT 384
Query: 63 FEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLA 122
V + +FP FLE PHPV+ + LS
Sbjct: 385 HRVYRKVFPNFLETCPHPVSFGALRHLS-------------------------------- 412
Query: 123 GMLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDK---YKDS 179
T LPVN W +Y + +T+N +++ L + C A DK Y +
Sbjct: 413 ------TVILPVNETWAQYLKSAEETYNTRLNDVQKRLEELCQVAVEA--KDKPEVYNND 464
Query: 180 LWLWDQDWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRRELVEK 239
WL DWS +++K+ K K G+
Sbjct: 465 PWLRQLDWSGQEIKMVKG--------------------KKKGD----------------- 487
Query: 240 FKPLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIPG 299
P + +LP G P+WY+ L K ++
Sbjct: 488 -PPRPAARQKLP-------GMPKWYKDLFPKANA-------------------------- 513
Query: 300 PSLISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVP 336
P +S +I P LL L W PL + +GW + VP
Sbjct: 514 PMNLSVRTRIAPLLLKLAWDGYPLVWSDKYGWTFQVP 550
>gi|353244282|emb|CCA75702.1| related to MIP1-DNA-directed DNA polymerase gamma catalytic subunit,
mitochondrial [Piriformospora indica DSM 11827]
Length = 1447
Score = 377 bits (968), Expect = e-101, Method: Compositional matrix adjust.
Identities = 216/504 (42%), Positives = 295/504 (58%), Gaps = 83/504 (16%)
Query: 431 FIKLPHKDGEHLNVGNPLSRDFINKFSDNSL----------------AG----VDIGAKR 470
F KLPH G+ NVGNPLS+ F+ D ++ AG V GA
Sbjct: 852 FRKLPHPHGQEANVGNPLSKSFVKYAQDGTMKTIVDTSTTNETEPGVAGDTEQVVNGAIN 911
Query: 471 IIEISRMLSYWRNNHERVKKQFVVWLNK-------KDLPRRLVENIESEG---------- 513
++++ SYW + +R+ Q VVW + K L R N + +G
Sbjct: 912 ALDMNAQCSYWISARDRILSQMVVWEKEHGQLGIGKHLKRPQDANPKQDGVASPLPTESA 971
Query: 514 ---------RDYGVILPQLIVSGTLTRRAVEATWMTASNAVGERVGSELRAMIQAPDGYS 564
+G+ILPQ+I GT+TRRA+E TW+TASNA RVGSEL+AM++AP GY+
Sbjct: 972 GTLVGGKLPEKWGMILPQVITMGTVTRRAIEKTWLTASNAKKNRVGSELKAMVRAPPGYA 1031
Query: 565 IIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMHSITAKAVGISREH 624
I+GADVDS+ELWI+SV+GD+ HGAT +GWMTL G K + TD+HS TA + I+R+
Sbjct: 1032 IVGADVDSEELWISSVMGDAQFGF-HGATAIGWMTLEGTKKDGTDLHSKTASILNITRDS 1090
Query: 625 AKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKGKKLYRLKDGHLEEL 684
AK+ NY+RIYGAG R A +LL Q N MS +A+S A K+Y TKGKK Y
Sbjct: 1091 AKVFNYSRIYGAGMRHAVQLLLQANAGMSIGEAQSLAEKLYLNTKGKKNY---------- 1140
Query: 685 IKRVYSKYEAREVCSAYNTSVDKIFDKPQWYGGTESAMFNRLEEIATSLQPVTPFLNCRL 744
++KY F + WYGGTES +FN+LE IA S P+TP L C +
Sbjct: 1141 ----HTKY----------------FGRSFWYGGTESYLFNKLEAIAHSDSPMTPALGCGV 1180
Query: 745 SRALEP--VSED-DSKFIQTRINWVVQSGAVDFLHLMLVCMRWLV---SRDTRFVISIHD 798
+ AL ++E + ++ +RINWVVQS VD+LHL+L M+ L+ S + R++IS+HD
Sbjct: 1181 TTALSRKYLTEGFGTDYLPSRINWVVQSSGVDYLHLLLSAMQHLIETYSINARYMISVHD 1240
Query: 799 EIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIPLSISFFSGVEIDKVLRKESDN 858
E+RYLV DE+KY A+AL + NL TR +L + D+P+ + FFS V+ID VLRKE D
Sbjct: 1241 EVRYLVADEDKYRLAMALQIANLWTRCLFAYRLGLDDLPVGVGFFSAVDIDIVLRKEVDM 1300
Query: 859 DCKTPSNPYGLCKGYGIPLGEILD 882
C TPS+P L G + +GE+L+
Sbjct: 1301 PCVTPSHPEALPPGESVGIGEVLE 1324
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 88/185 (47%), Gaps = 39/185 (21%)
Query: 6 WTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLATFEV 65
W V+S+NSL EV KL+C G +DK RN F+E + E I + + + YCA D T V
Sbjct: 352 WEEVTSVNSLLEVAKLHC-GITIDKETRNAFMEDTPEQILADLESFIDYCATDVSTTHAV 410
Query: 66 IQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLAGML 125
+A+ P F + PHPV+ AG++
Sbjct: 411 FRAVLPQFFDACPHPVSWAGVM-------------------------------------- 432
Query: 126 ELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDKYKDSLWLWDQ 185
++ +++L VN W KY ++ + + DL +K+ L+D ++A L+ ++K ++L
Sbjct: 433 QMGSSFLTVNQEWEKYLTQAEKKYRDLETGVKTRLIDLAERARLLMEGGEWKKDVFLSQL 492
Query: 186 DWSVK 190
DW+ K
Sbjct: 493 DWTPK 497
>gi|326472602|gb|EGD96611.1| DNA polymerase gamma [Trichophyton tonsurans CBS 112818]
Length = 1140
Score = 377 bits (968), Expect = e-101, Method: Compositional matrix adjust.
Identities = 209/474 (44%), Positives = 287/474 (60%), Gaps = 53/474 (11%)
Query: 427 REIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEISRMLSYWRNNHE 486
+E + KLPHKDG +PLS+ ++ F L+ AK +E++ SYW + +
Sbjct: 581 KEHVYFKLPHKDGPDARCASPLSKGYLQYFESGKLSSQFPLAKEALEMNASCSYWISARD 640
Query: 487 RVKKQFVVWLNKKDLPRRLVENIESEGRDY------GVILPQLIVSGTLTRRAVEATWMT 540
R+ Q VV+ KKDL E S GR+ G ILPQ+I GT+TRRAVE TW+T
Sbjct: 641 RITSQMVVY--KKDL-----EKTGSLGRELSPDSKVGFILPQVIPMGTITRRAVENTWLT 693
Query: 541 ASNAVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTL 600
ASNA RVGSEL+AM++AP GY +GADVDS+ELWIAS++GD+ + HG +G+MTL
Sbjct: 694 ASNAKPNRVGSELKAMVRAPPGYVFVGADVDSEELWIASLVGDAQF-QLHGGNAIGFMTL 752
Query: 601 SGQKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSK 660
G K+ TD+HS TAK +GISR +AK+ NY RIYGAG +FA LL+QFNP MS+++ K+
Sbjct: 753 EGTKAAGTDLHSKTAKILGISRNNAKVFNYGRIYGAGLKFAATLLRQFNPSMSEAETKAV 812
Query: 661 ARKMYTLTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQWYGGTES 720
A K+Y TKG + R R+ S + P GGTES
Sbjct: 813 AAKLYKETKGTRTTR-----------RILS-------------------ENPFLRGGTES 842
Query: 721 AMFNRLEEIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLV 780
+FN+LEE A +P TP L ++ AL + F+ +RINW +QS VD+LHL+++
Sbjct: 843 FVFNKLEEFAEQERPRTPVLGAGITEALMRRFINKGGFMTSRINWAIQSSGVDYLHLLII 902
Query: 781 CMRWLVSR---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIP 837
M +L+ R D R I++HDEIRY+V + +KY+ A+AL V NL TRA +++ + D+P
Sbjct: 903 SMDYLIRRFNLDARLAITVHDEIRYVVRETDKYKAAMALQVANLWTRAMFSQQMGIDDLP 962
Query: 838 LSISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKAN 891
S +FFS V+ID VLRKE + DC TPS+P IP GE LDI + + K +
Sbjct: 963 QSCAFFSAVDIDHVLRKEVNMDCVTPSHP------NKIPHGESLDINELLSKGD 1010
Score = 92.4 bits (228), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 83/337 (24%), Positives = 125/337 (37%), Gaps = 115/337 (34%)
Query: 3 DESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLAT 62
+E W SS+NSL +V K +C +DK RN F E E I L+ YCA D T
Sbjct: 328 EELWVGRSSVNSLRDVAKFHC-NITIDKAQRNYFGELDREGINGQLDELLDYCAADVAIT 386
Query: 63 FEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLA 122
V + +FP FLE PHPV+ A + LS
Sbjct: 387 HRVYKKVFPNFLETCPHPVSFAALRHLS-------------------------------- 414
Query: 123 GMLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDK---YKDS 179
T LPVN W +Y + +T++ ++ L++ C+ A + DK Y++
Sbjct: 415 ------TVILPVNETWGEYLKSAEETYHHALDNVQKRLVELCENALKV--KDKPEIYQND 466
Query: 180 LWLWDQDWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRRELVEK 239
WL DWS +++++ K K G+
Sbjct: 467 PWLRQLDWSGQEIRMVKG--------------------KKKGD----------------- 489
Query: 240 FKPLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIPG 299
P + +LP G P+WY+ L SK ++
Sbjct: 490 -PPRPAARQKLP-------GMPKWYKDLF---------PTSKSDIN-------------- 518
Query: 300 PSLISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVP 336
I+ +I+P LL+L+W PL + HGW + VP
Sbjct: 519 ---ITVRTRISPILLNLSWDGFPLVWSDKHGWTFEVP 552
>gi|358255246|dbj|GAA56965.1| DNA polymerase gamma 1, partial [Clonorchis sinensis]
Length = 1234
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 211/487 (43%), Positives = 288/487 (59%), Gaps = 57/487 (11%)
Query: 431 FIKLPHKDGEHLNVGNPLSRDF-----INKFSDNSLAGVDIG------------------ 467
F LPH DGE L VG+PLSR F N+ S+ +D+
Sbjct: 722 FNHLPHDDGEGLPVGSPLSRSFQTHIAANRLHSASMEMLDLPRVNAQETPSSPSDIHTAH 781
Query: 468 -AKRIIEISRMLSYWRNNHERVKKQFVVWLNKKDLPR--RLVENIESEGRDYGVILPQLI 524
A ++ ++W++ +R++ Q VWL LP R N G +G ILPQ+I
Sbjct: 782 LATELLRDRVHATFWQSYSKRIRNQMAVWLPTSILPTEVRNDPNFNPSGH-HGAILPQVI 840
Query: 525 VSGTLTRRAVEATWMTASNAVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDS 584
V+GT++RRAVE W+TASNA R+GSE++AM+QAP GY +GADVDSQE+WIA++IGD+
Sbjct: 841 VAGTVSRRAVEPLWLTASNADRNRLGSEIKAMVQAPPGYCFVGADVDSQEMWIAALIGDA 900
Query: 585 YCAKE----HGATPLGWMTLSGQKSNATDMHSITAKAVGISREHAKIINYARIYGAGERF 640
+ H ATP GWMTL G K++ TD+H+ A+ +GI+R AK++NYAR+YG+G F
Sbjct: 901 SFGFQGKSFHSATPYGWMTLEGNKTDGTDLHTKIAQIMGITRNEAKVLNYARLYGSGYEF 960
Query: 641 AERLLKQFNPEMSKSDAKSKARKMYTLTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSA 700
+ LL +F+ ++ A KA ++ TKG+ R S+ A +
Sbjct: 961 TKHLLTKFS-NLTPEQAGLKANQLLRTTKGQ---------------RTGSQSRAWKKPGH 1004
Query: 701 YNTSVDKIFDKP--QWYGGTESAMFNRLEEIATSLQPVTPFLNCRLSRALEP--VSEDDS 756
+T +P +W+GG+ESA+FN LE IA S +P TP L R++RAL P V ED
Sbjct: 1005 DSTEQANDASEPPARWHGGSESAVFNELEGIARSSEPCTPVLKARMTRALNPKLVKED-- 1062
Query: 757 KFIQTRINWVVQSGAVDFLHLMLVCMRWLVSR---DTRFVISIHDEIRYLVPDEEKYETA 813
F+ +RINWVVQS AVD+LH ML+ M WL+ + R ISIHDE+RYL + A
Sbjct: 1063 -FLPSRINWVVQSSAVDYLHCMLLVMGWLIQKYNLPARLCISIHDEVRYLCRQDAADRVA 1121
Query: 814 LALHVTNLLTRAFCIKKLDMTDIPLSISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGY 873
LAL ++NL TRAF +L M D+P S++FFS VEID LRK ++DC TPSNP GL K Y
Sbjct: 1122 LALQISNLFTRAFFAYQLGMRDLPESVAFFSSVEIDTCLRKNPEDDCITPSNPDGLRKTY 1181
Query: 874 GIPLGEI 880
GIP G +
Sbjct: 1182 GIPSGNM 1188
Score = 103 bits (257), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 81/163 (49%), Gaps = 39/163 (23%)
Query: 6 WTNVSSLNSLSEVYKLYCEGKV-LDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLATFE 64
W + +SLN+L++VY+LYC + DKT R++F G+ ++++ + LM YCA D T+E
Sbjct: 310 WISETSLNNLTDVYRLYCAKEPPQDKTARSVFESGTRQEVQTRFQELMRYCATDVSMTYE 369
Query: 65 VIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLAGM 124
V Q L PLF ERFPHP TL GMLE+ + Y
Sbjct: 370 VFQKLLPLFKERFPHPATLYGMLEMGSMY------------------------------- 398
Query: 125 LELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQA 167
LP+N++W K+ + + F + K LLM DQA
Sbjct: 399 -------LPINDSWSKFQENADRKFGENEQRQKQLLMQLADQA 434
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 38/75 (50%), Gaps = 20/75 (26%)
Query: 262 EWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIPGPSLISTSMQITPKLLSLTWKSM 321
EWYR+L KP + DA GP+L++ M+I PKLL L W+ +
Sbjct: 444 EWYRELIPKPIKENLDA--------------------GPALLTAQMRIAPKLLRLCWQGL 483
Query: 322 PLHFIRGHGWGYLVP 336
PLH+ + WG L+P
Sbjct: 484 PLHYDQELKWGVLIP 498
>gi|440473209|gb|ELQ42024.1| DNA polymerase gamma [Magnaporthe oryzae Y34]
gi|440480250|gb|ELQ60925.1| DNA polymerase gamma [Magnaporthe oryzae P131]
Length = 1187
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 207/499 (41%), Positives = 288/499 (57%), Gaps = 51/499 (10%)
Query: 408 KKLAEASSTDTSTDDADTPREIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIG 467
+++ E +D + + T I + KLPHKDG NP+++ ++ F L+
Sbjct: 595 RQMIECDMSDETNEKLRTDGGI-YFKLPHKDGPLARCANPMAKGYLGYFESGLLSSEYSY 653
Query: 468 AKRIIEISRMLSYWRNNHERVKKQFVVWLNKKDLP---------RRLVENIESEGRDYGV 518
AK +E++ SYW + +R+ Q VV+ N+ P R +SE + G
Sbjct: 654 AKEALEMNASCSYWISARDRIMSQLVVYENEVSAPTASASTKKSRNTKRTPQSETKS-GF 712
Query: 519 ILPQLIVSGTLTRRAVEATWMTASNAVGERVGSELRAMIQAPDGYSIIGADVDSQELWIA 578
ILPQ+I GT+TRRAVE TW+TASNA RVGSEL+AM++AP GY +GADVDS+ELWIA
Sbjct: 713 ILPQIIPMGTITRRAVENTWLTASNAKKNRVGSELKAMVKAPPGYCFVGADVDSEELWIA 772
Query: 579 SVIGDSYCAKEHGATPLGWMTLSGQKSNATDMHSITAKAVGISREHAKIINYARIYGAGE 638
SV+GD+ K HG +G+MTL G K+ TD+HS TA +GI+R AK+ NY RIYGAG
Sbjct: 773 SVVGDA-TFKLHGGNAIGFMTLEGTKAAGTDLHSRTASILGITRNDAKVFNYGRIYGAGL 831
Query: 639 RFAERLLKQFNPEMSKSDAKSKARKMYTLTKGKKLYRLKDGHLEELIKRVYSKYEAREVC 698
+FA +LL+QFNP +S+ + A K+Y TKG K
Sbjct: 832 KFAGQLLRQFNPNLSEQETVETASKLYAATKGAK-------------------------- 865
Query: 699 SAYNTSVDKIFDKPQWYGGTESAMFNRLEEIATSLQPVTPFLNCRLSRALEPVSEDDSKF 758
T+ ++ +P W GGTES +FN+LEE A +P TP L ++ AL +
Sbjct: 866 ----TNRKALYKRPFWRGGTESFVFNKLEEFAEQERPRTPVLGAGITEALMSRFMSKGGY 921
Query: 759 IQTRINWVVQSGAVDFLHLMLVCMRWLVSR---DTRFVISIHDEIRYLVPDEEKYETALA 815
+ +RINW +QS VD+LHL++V M +L+ R D R I++HDEIRYLV D +KY A+A
Sbjct: 922 LTSRINWAIQSSGVDYLHLLIVSMDYLMRRFNIDARLAITVHDEIRYLVKDHDKYRAAMA 981
Query: 816 LHVTNLLTRAFCIKKLDMTDIPLSISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGI 875
L V NL TRA +++ + D+P S ++FS V+ID VLRKE D DC TPS+ I
Sbjct: 982 LQVANLWTRAMFAEQVGIRDLPQSAAYFSAVDIDHVLRKEVDMDCITPSH------STPI 1035
Query: 876 PLGEILDIYQTIDKANGVI 894
P GE LDI ++K +
Sbjct: 1036 PHGESLDIKTLLEKGDAAF 1054
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 78/332 (23%), Positives = 116/332 (34%), Gaps = 111/332 (33%)
Query: 3 DESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLAT 62
+E W SS+NSL +V K + + DK R+ F + I L+ YCA D T
Sbjct: 361 EELWVERSSVNSLRDVAKFHLNVSI-DKAIRDDFSVLDRDGIMAKLEELLDYCAADVAVT 419
Query: 63 FEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLA 122
V + ++ FP FLE PHPV+ A
Sbjct: 420 HRV-----------------------------------YSIV---FPNFLEVCPHPVSFA 441
Query: 123 GMLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHD-DKYKDSLW 181
+ LS+ LPVN +W Y + T+ L+ ++ L+ ++A + D DK+ W
Sbjct: 442 ALRHLSSVILPVNESWDSYIANAEATYQKLSEAVQERLIALTEKALEIKDDQDKWSADPW 501
Query: 182 LWDQDWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRRELVEKFK 241
L DWS +++K+ K K + P R + K
Sbjct: 502 LSQLDWSGQEIKMVKGKKK-------GDPP----------------------RPAARQKK 532
Query: 242 PLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIPGPS 301
P G P+WY+ L VK S P
Sbjct: 533 P----------------GMPQWYKDLFVKNDS--------------------------PI 550
Query: 302 LISTSMQITPKLLSLTWKSMPLHFIRGHGWGY 333
I+ +I P LL L W PL + +GW +
Sbjct: 551 GITVRTRIAPLLLRLAWDGHPLVWSDKYGWTF 582
>gi|302652096|ref|XP_003017908.1| hypothetical protein TRV_08074 [Trichophyton verrucosum HKI 0517]
gi|291181493|gb|EFE37263.1| hypothetical protein TRV_08074 [Trichophyton verrucosum HKI 0517]
Length = 1137
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 207/470 (44%), Positives = 288/470 (61%), Gaps = 45/470 (9%)
Query: 427 REIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEISRMLSYWRNNHE 486
RE + KLPHKDG +PLS+ ++ F L+ AK +E++ SYW + +
Sbjct: 578 REHVYFKLPHKDGPDARCASPLSKGYLQYFESGKLSSQFPLAKEALEMNASCSYWISARD 637
Query: 487 RVKKQFVVWLNKKDLPRR--LVENIESEGRDYGVILPQLIVSGTLTRRAVEATWMTASNA 544
R+ Q VV+ KKDL + L + + + + G ILPQ+I GT+TRRAVE TW+TASNA
Sbjct: 638 RITSQMVVY--KKDLEKTGALCKELSPDSK-VGFILPQVIPMGTITRRAVENTWLTASNA 694
Query: 545 VGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQK 604
RVGSEL+AM++AP GY +GADVDS+ELWIAS++GD+ + HG +G+MTL G K
Sbjct: 695 KPNRVGSELKAMVRAPPGYVFVGADVDSEELWIASLVGDAQF-QLHGGNAIGFMTLEGTK 753
Query: 605 SNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKM 664
+ TD+HS TAK +GISR +AK+ NY RIYGAG +FA LL+QFNP MS+++ K+ A K+
Sbjct: 754 AAGTDLHSKTAKILGISRNYAKVFNYGRIYGAGLKFAATLLRQFNPSMSEAETKAVAAKL 813
Query: 665 YTLTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQWYGGTESAMFN 724
Y TKG + R R+ S + P GGTES +FN
Sbjct: 814 YKETKGTRTTR-----------RILS-------------------ENPFLRGGTESFVFN 843
Query: 725 RLEEIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLVCMRW 784
+LEE A +P TP L ++ AL + F+ +RINW +QS VD+LHL+++ M +
Sbjct: 844 KLEEFAEQERPRTPVLGAGITEALMRRFINKGGFMTSRINWAIQSSGVDYLHLLIISMDY 903
Query: 785 LVSR---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIPLSIS 841
L+ R D R I++HDEIRY+V + +KY+ A+AL V NL TRA +++ + D+P S +
Sbjct: 904 LIRRFNLDARLAITVHDEIRYVVRETDKYKAAMALQVANLWTRAMFSQQMGIDDLPQSCA 963
Query: 842 FFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKAN 891
FFS V+ID VLRKE + DC TPS+P IP GE LDI + + K +
Sbjct: 964 FFSAVDIDHVLRKEVNMDCVTPSHP------NIIPHGESLDINELLSKGD 1007
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/337 (24%), Positives = 124/337 (36%), Gaps = 115/337 (34%)
Query: 3 DESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLAT 62
+E W SS+NSL +V K +C +DK RN F E E I L+ YCA D T
Sbjct: 325 EELWVGRSSVNSLRDVAKFHC-NITIDKAQRNYFGELDREGINGQLDELLDYCAADVAIT 383
Query: 63 FEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLA 122
V + +FP FLE PHPV+ A + LS
Sbjct: 384 HRVYKKVFPNFLETCPHPVSFAALRHLS-------------------------------- 411
Query: 123 GMLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDK---YKDS 179
T LPVN W +Y + T++ ++ L++ C+ A + DK Y++
Sbjct: 412 ------TVILPVNETWGEYLKNAEDTYHRALDNVQKRLVELCENALKV--KDKPEIYQND 463
Query: 180 LWLWDQDWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRRELVEK 239
WL DWS +++++ K K G+
Sbjct: 464 PWLRQLDWSGQEIRMVKG--------------------KKKGD----------------- 486
Query: 240 FKPLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIPG 299
P + +LP G P+WY+ +L SD +
Sbjct: 487 -PPRPAARQKLP-------GMPKWYK-----------------DLFPTSKSDIN------ 515
Query: 300 PSLISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVP 336
I+ +I+P LL+L+W PL + HGW + VP
Sbjct: 516 ---ITVRTRISPILLNLSWDGFPLVWSDKHGWTFEVP 549
>gi|320583448|gb|EFW97661.1| DNA polymerase gamma [Ogataea parapolymorpha DL-1]
Length = 1141
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 204/463 (44%), Positives = 282/463 (60%), Gaps = 55/463 (11%)
Query: 430 GFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEISRMLSYWRNNHERVK 489
F K+PH++G +S+ F+ F L+ AK + ++ SYW ++ ER+
Sbjct: 557 SFFKVPHEEGPESRTTTLMSKPFLRYFEQGILSSEYDLAKDALNLAVRNSYWISSRERIM 616
Query: 490 KQFVVWLNKKDLPRRLVENIESEGRDYGVILPQLIVSGTLTRRAVEATWMTASNAVGERV 549
QFVV+ KKD I+S+ G+I+PQ+I GT+TRRAVE TW+TASNA R+
Sbjct: 617 NQFVVY--KKDA-------IDSK---IGMIIPQIIPMGTITRRAVENTWLTASNAKKSRL 664
Query: 550 GSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATD 609
GSEL+AMIQ+P GY +GADVDS+ELW+AS++GDS K HG T +GWMTL G KS TD
Sbjct: 665 GSELKAMIQSPPGYCFVGADVDSEELWVASLVGDS-VFKIHGGTAIGWMTLEGTKSEGTD 723
Query: 610 MHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTK 669
+HS TAK +GISR AK+ NY RIYGAG +FA LLK+FNP ++++DA+ A ++Y TK
Sbjct: 724 LHSKTAKILGISRNDAKVFNYGRIYGAGVKFATSLLKKFNPALTEADARKTASELYAATK 783
Query: 670 GKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQWYGGTESAMFNRLEEI 729
G+ + +V+K + W+GG+ES +FNRLE I
Sbjct: 784 GQ------------------------------SQTVNK---RKMWFGGSESIVFNRLETI 810
Query: 730 ATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLVCMRWLVSR- 788
A P TP L ++ AL+ + + F+ +RINW +QS VD+LHL++V M +L+ R
Sbjct: 811 AEQEHPKTPVLGAGITSALQKKNLHSNTFLPSRINWAIQSSGVDYLHLLVVSMEYLLKRY 870
Query: 789 --DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIPLSISFFSGV 846
D R I++HDEIRY+V E+KY+ A+ L + NL TRA +L + ++P S +FFS V
Sbjct: 871 KVDARLCITVHDEIRYIVKKEQKYKCAMILQIANLWTRAMFCHQLGIDEVPQSCAFFSAV 930
Query: 847 EIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDK 889
+ID VLRKE D DC TPSNP IP GE L I ++K
Sbjct: 931 DIDHVLRKEVDLDCCTPSNP------TAIPPGEALTIVDLLEK 967
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 78/337 (23%), Positives = 122/337 (36%), Gaps = 120/337 (35%)
Query: 1 MTDESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTL 60
+ D+ W SSLN L V +C G + K R+ F + ++I N+ LM YCA D +
Sbjct: 299 LEDDPWLRTSSLNGLQYVAHHHC-GINITKETRDQFSTTNPQEIIENFQKLMEYCATDVV 357
Query: 61 ATFEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVT 120
T+ V ++P F E PHPV+
Sbjct: 358 TTYR--------------------------------------VFHKVYPEFRELVPHPVS 379
Query: 121 LAGMLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHD--DKYKD 178
LA + +S ++LP N W KY + Q + D ++++ L C+Q SL D + +
Sbjct: 380 LAALRHISQSFLPTNEAWEKYITRTEQMYQDSVEKIENNLKKMCEQVVSLKDDPSQPWLN 439
Query: 179 SLWLWDQDWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRRELVE 238
WL DW++ KL KK
Sbjct: 440 DPWLSQLDWTIIPPKLTKKGT--------------------------------------- 460
Query: 239 KFKPLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIP 298
P + GYPEWY+KL K D ++ T ++
Sbjct: 461 ------------PYRRQKMPGYPEWYKKLFSK----------------DNMTLTPKS--- 489
Query: 299 GPSLISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLV 335
++TP LL L+W+ P++++ GW +LV
Sbjct: 490 ---------RVTPLLLKLSWEGKPVYWLDSKGWCFLV 517
>gi|336469816|gb|EGO57978.1| DNA polymerase gamma [Neurospora tetrasperma FGSC 2508]
Length = 1157
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 200/465 (43%), Positives = 280/465 (60%), Gaps = 41/465 (8%)
Query: 431 FIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEISRMLSYWRNNHERVKK 490
+ KLPHKDG + NP+++ ++ F L+ AK +E++ SYW + ER+K
Sbjct: 582 YFKLPHKDGPNARCVNPMAKGYLPYFEKGILSSEYPYAKEALEMNASCSYWISARERIKN 641
Query: 491 QFVVWLNKKDLPRRLV-ENIESEGRDYGVILPQLIVSGTLTRRAVEATWMTASNAVGERV 549
Q VV+ ++ +R V ++ +S G +LPQ+I GT+TRRAVE TW+TASNA RV
Sbjct: 642 QMVVYEDQLPPSQRFVNKDADSNTPIGGFVLPQVIPMGTITRRAVERTWLTASNAKKNRV 701
Query: 550 GSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATD 609
GSEL+AM++AP GY +GADVDS+ELWIASV+GD+ K HG +G+MTL G KS TD
Sbjct: 702 GSELKAMVRAPPGYVFVGADVDSEELWIASVVGDA-TFKLHGGNAIGFMTLEGTKSQGTD 760
Query: 610 MHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTK 669
+HS TA +GI+R AK+ NY RIYGAG +FA +LL+QFNP +++++ + A K+Y TK
Sbjct: 761 LHSRTASILGITRNDAKVFNYGRIYGAGLKFASQLLRQFNPSLTEAETTAIATKLYDATK 820
Query: 670 GKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQWYGGTESAMFNRLEEI 729
G K R + L KR + W GGTES +FN LEE
Sbjct: 821 GAKTNR------KSLYKRSF------------------------WRGGTESFVFNMLEEF 850
Query: 730 ATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLVCMRWLVSR- 788
A +P TP L ++ AL F+ +RINW +QS VD+LHL+++ M +L R
Sbjct: 851 AEQERPRTPVLGAGITEALMSRWVSKGGFLTSRINWAIQSSGVDYLHLLIIAMDYLTRRF 910
Query: 789 --DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIPLSISFFSGV 846
R I++HDEIRYL + +KY A+AL + NL TR +++ + D+P S +FFS V
Sbjct: 911 NLACRLAITVHDEIRYLAEEHDKYRVAMALQIANLWTRVMFAQQVGIQDLPQSCAFFSAV 970
Query: 847 EIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKAN 891
+ID VLRKE D DC TPSNP + GE +DI+Q ++K +
Sbjct: 971 DIDHVLRKEVDMDCITPSNPIPIAH------GESIDIFQILEKGD 1009
Score = 87.0 bits (214), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 80/332 (24%), Positives = 122/332 (36%), Gaps = 110/332 (33%)
Query: 6 WTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLATFEV 65
W + SS+NSL +V + + K+ DK R++F E I N +L+TYCA D T +V
Sbjct: 326 WVDKSSINSLRDVAQFHLNVKI-DKDIRDVFAETDRNVILNQLDDLLTYCAADVQVTHQV 384
Query: 66 IQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLAGML 125
Q +FP FL PHPV+ A + L
Sbjct: 385 YQVVFPNFLGVCPHPVSFAALRHL------------------------------------ 408
Query: 126 ELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHD-DKYKDSLWLWD 184
++ LPVN W Y + T+ + ++ L ++ D +KY WL
Sbjct: 409 --ASVILPVNKTWDTYIETAEATYLQMLHGVQERLFTLMERTLDYKADPEKYLSDPWLSQ 466
Query: 185 QDWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRRELVEKFKPLM 244
DWS +++K+ K K G+ VE+
Sbjct: 467 LDWSGQEIKMAKP--------------------KKKGD--------------VER----- 487
Query: 245 QTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIPGPSLIS 304
P + L GYP+WY+ L +K HD I+ ++
Sbjct: 488 ------PALNQKLPGYPQWYKDLFIKAR-------------HDFIN------------LT 516
Query: 305 TSMQITPKLLSLTWKSMPLHFIRGHGWGYLVP 336
+I P LL L+W+ PL + GW + VP
Sbjct: 517 VRSRIAPLLLKLSWEGYPLFWSDQFGWTFQVP 548
>gi|403215851|emb|CCK70349.1| hypothetical protein KNAG_0E00810 [Kazachstania naganishii CBS 8797]
Length = 1222
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 207/483 (42%), Positives = 287/483 (59%), Gaps = 49/483 (10%)
Query: 421 DDADTPREIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEISRMLSY 480
D+ + E+ F ++PH DG +N LS+ +I+ F L A + I+ SY
Sbjct: 566 DEYNVTGEVLF-RIPHPDGPTMNCTTLLSKPYIHYFEKGILTSGSPYALEALRINSSGSY 624
Query: 481 WRNNHERVKKQFVVWLNKKDLP---RRLVENIESEGRD-YGVILPQLIVSGTLTRRAVEA 536
W + ER+ QFVV +KK P + L S G+D G+ILPQ+I GT+TRRAVE
Sbjct: 625 WMSARERITSQFVV--SKKAFPDQFKLLKSGNRSSGKDDLGIILPQIIPMGTVTRRAVEN 682
Query: 537 TWMTASNAVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLG 596
TW+TASNA R+GSEL+A ++APDGY +GADVDS+ELWIAS++GDS HG T +G
Sbjct: 683 TWLTASNAKANRIGSELKAQVKAPDGYCFVGADVDSEELWIASLVGDS-VFNLHGGTAMG 741
Query: 597 WMTLSGQKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSD 656
WM L G K TD+H+ TAK +G SR AKI NY RIYGAG +FA +LLK+F+P ++++
Sbjct: 742 WMCLEGTKHEGTDLHTKTAKILGCSRNEAKIFNYGRIYGAGVKFAGQLLKKFSPTLTETG 801
Query: 657 AKSKARKMYTLTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQWYG 716
AK+ A +Y TKGK + K+F K WYG
Sbjct: 802 AKNTAVSLYENTKGK-------------------------------SKRSKVFQK-FWYG 829
Query: 717 GTESAMFNRLEEIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLH 776
G+ES +FN+LE IA QP TP L C ++ +L + + F+ +RINWV+QS VD+LH
Sbjct: 830 GSESIVFNKLENIAEQDQPRTPVLGCSITSSLMKQNLKANSFLPSRINWVIQSSGVDYLH 889
Query: 777 LMLVCMRWLVSR---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDM 833
L+ M +L+++ RF ISIHDEIRYL +E+KY ALAL ++NL TRA +++ +
Sbjct: 890 LLCCSMNYLIAKYGLRARFCISIHDEIRYLAAEEDKYRVALALQISNLWTRAIFCEQIGI 949
Query: 834 TDIPLSISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKANGV 893
D+P + +FFS V+ID V+RKE + DC TPS+P IP GE +I + +
Sbjct: 950 DDLPQNCAFFSAVDIDTVMRKEVNMDCVTPSSP------TPIPHGETKNIVELLSTEGFQ 1003
Query: 894 IGT 896
+G
Sbjct: 1004 LGA 1006
Score = 77.0 bits (188), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 54/95 (56%), Gaps = 1/95 (1%)
Query: 3 DESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLAT 62
D+ W VSS+NSL +V + +C G +DK R+ F + N+ LM YCA D T
Sbjct: 316 DDPWLMVSSMNSLRDVTEFHC-GIKMDKEPRDFFAAEHKNVVIGNFQKLMGYCATDVECT 374
Query: 63 FEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDT 97
+V +FPLFL++ PHPV+ + LS+ LP +
Sbjct: 375 SKVFDKVFPLFLQKCPHPVSFGALKSLSSCILPTS 409
>gi|389632579|ref|XP_003713942.1| DNA polymerase gamma [Magnaporthe oryzae 70-15]
gi|351646275|gb|EHA54135.1| DNA polymerase gamma [Magnaporthe oryzae 70-15]
Length = 1147
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 203/476 (42%), Positives = 278/476 (58%), Gaps = 50/476 (10%)
Query: 431 FIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEISRMLSYWRNNHERVKK 490
+ KLPHKDG NP+++ ++ F L+ AK +E++ SYW + +R+
Sbjct: 577 YFKLPHKDGPLARCANPMAKGYLGYFESGLLSSEYSYAKEALEMNASCSYWISARDRIMS 636
Query: 491 QFVVWLNKKDLP---------RRLVENIESEGRDYGVILPQLIVSGTLTRRAVEATWMTA 541
Q VV+ N+ P R +SE + G ILPQ+I GT+TRRAVE TW+TA
Sbjct: 637 QLVVYENEVSAPTASASTKKSRNTKRTPQSETKS-GFILPQIIPMGTITRRAVENTWLTA 695
Query: 542 SNAVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLS 601
SNA RVGSEL+AM++AP GY +GADVDS+ELWIASV+GD+ K HG +G+MTL
Sbjct: 696 SNAKKNRVGSELKAMVKAPPGYCFVGADVDSEELWIASVVGDA-TFKLHGGNAIGFMTLE 754
Query: 602 GQKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKA 661
G K+ TD+HS TA +GI+R AK+ NY RIYGAG +FA +LL+QFNP +S+ + A
Sbjct: 755 GTKAAGTDLHSRTASILGITRNDAKVFNYGRIYGAGLKFAGQLLRQFNPNLSEQETVETA 814
Query: 662 RKMYTLTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQWYGGTESA 721
K+Y TKG K T+ ++ +P W GGTES
Sbjct: 815 SKLYAATKGAK------------------------------TNRKALYKRPFWRGGTESF 844
Query: 722 MFNRLEEIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLVC 781
+FN+LEE A +P TP L ++ AL ++ +RINW +QS VD+LHL++V
Sbjct: 845 VFNKLEEFAEQERPRTPVLGAGITEALMSRFMSKGGYLTSRINWAIQSSGVDYLHLLIVS 904
Query: 782 MRWLVSR---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIPL 838
M +L+ R D R I++HDEIRYLV D +KY A+AL V NL TRA +++ + D+P
Sbjct: 905 MDYLMRRFNIDARLAITVHDEIRYLVKDHDKYRAAMALQVANLWTRAMFAEQVGIRDLPQ 964
Query: 839 SISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKANGVI 894
S ++FS V+ID VLRKE D DC TPS+ IP GE LDI ++K +
Sbjct: 965 SAAYFSAVDIDHVLRKEVDMDCITPSH------STPIPHGESLDIKTLLEKGDAAF 1014
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 78/332 (23%), Positives = 116/332 (34%), Gaps = 111/332 (33%)
Query: 3 DESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLAT 62
+E W SS+NSL +V K + + DK R+ F + I L+ YCA D T
Sbjct: 321 EELWVERSSVNSLRDVAKFHLNVSI-DKAIRDDFSVLDRDGIMAKLEELLDYCAADVAVT 379
Query: 63 FEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLA 122
V + ++ FP FLE PHPV+ A
Sbjct: 380 HRV-----------------------------------YSIV---FPNFLEVCPHPVSFA 401
Query: 123 GMLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHD-DKYKDSLW 181
+ LS+ LPVN +W Y + T+ L+ ++ L+ ++A + D DK+ W
Sbjct: 402 ALRHLSSVILPVNESWDSYIANAEATYQKLSEAVQERLIALTEKALEIKDDQDKWSADPW 461
Query: 182 LWDQDWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRRELVEKFK 241
L DWS +++K+ K K + P R + K
Sbjct: 462 LSQLDWSGQEIKMVKGKKK-------GDPP----------------------RPAARQKK 492
Query: 242 PLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIPGPS 301
P G P+WY+ L VK S P
Sbjct: 493 P----------------GMPQWYKDLFVKNDS--------------------------PI 510
Query: 302 LISTSMQITPKLLSLTWKSMPLHFIRGHGWGY 333
I+ +I P LL L W PL + +GW +
Sbjct: 511 GITVRTRIAPLLLRLAWDGHPLVWSDKYGWTF 542
>gi|310789378|gb|EFQ24911.1| DNA polymerase family A [Glomerella graminicola M1.001]
Length = 1148
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 209/498 (41%), Positives = 296/498 (59%), Gaps = 50/498 (10%)
Query: 402 ANVLDKKKLAEASSTDTSTDDADTPREIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSL 461
A+ +K++ E +D+ +D A F KLPHKDG NP+++ +++ F +L
Sbjct: 554 ASDYQQKQMIECDFSDSESDAALRKEHGVFFKLPHKDGPTARCVNPMAKGYLSYFEKGTL 613
Query: 462 AGVDIGAKRIIEISRMLSYWRNNHERVKKQFVVWLNKKDLPRRLVENIESEGRD------ 515
+ AK +E++ SYW + +R+ Q VV+ N D+P R +N S G++
Sbjct: 614 SSEYSYAKEALEMNASCSYWISARDRIMSQMVVYEN--DIPGR--DNKASSGKEKDPEQV 669
Query: 516 YGVILPQLIVSGTLTRRAVEATWMTASNAVGERVGSELRAMIQAPDGYSIIGADVDSQEL 575
G ILPQ+I GT+TRRAVE TW+TASNA RVGSEL++M++AP GYS +GADVDS+EL
Sbjct: 670 QGYILPQIIPMGTITRRAVENTWLTASNAKKNRVGSELKSMVKAPPGYSFVGADVDSEEL 729
Query: 576 WIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMHSITAKAVGISREHAKIINYARIYG 635
WIAS++GD+ K HG +G+MTL G K+ TD+HS TA +GI+R AK+ NY RIYG
Sbjct: 730 WIASLVGDA-TFKLHGGNAIGFMTLEGTKAAGTDLHSRTASILGITRNDAKVFNYGRIYG 788
Query: 636 AGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKGKKLYRLKDGHLEELIKRVYSKYEAR 695
AG +FA +LL+QFNP +S+ + A ++Y TKG K R V SK
Sbjct: 789 AGLKFAGQLLRQFNPNLSEKETNETAARLYAKTKGTKTNR-----------SVLSK---- 833
Query: 696 EVCSAYNTSVDKIFDKPQWYGGTESAMFNRLEEIATSLQPVTPFLNCRLSRALEPVSEDD 755
+P W GGTES +FN+LEE A +P T L ++ AL +
Sbjct: 834 ---------------RPFWRGGTESFLFNKLEEFAAQERPRTFVLGAGITEALMRRFINQ 878
Query: 756 SKFIQTRINWVVQSGAVDFLHLMLVCMRWLVSR---DTRFVISIHDEIRYLVPDEEKYET 812
+ ++ +RINW +QS VD+LHL++V M +L R + R I++HDEIRYLV D +KY
Sbjct: 879 NGYLTSRINWAIQSSGVDYLHLLIVGMDYLTRRFNIEARLAITVHDEIRYLVKDHDKYRA 938
Query: 813 ALALHVTNLLTRAFCIKKLDMTDIPLSISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKG 872
A+AL V N+ TRA +++ + D+P S+++FS ++ID VLRKE D DC TPS+
Sbjct: 939 AMALQVANVWTRAMFSQQVGINDLPQSVAYFSAIDIDHVLRKEVDMDCVTPSH------K 992
Query: 873 YGIPLGEILDIYQTIDKA 890
IP GE LDI + K
Sbjct: 993 TAIPPGESLDITALLAKG 1010
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 78/337 (23%), Positives = 125/337 (37%), Gaps = 111/337 (32%)
Query: 3 DESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLAT 62
+E W + SS+NSL +V K + + +DK R+ F + NL+ YCA D T
Sbjct: 326 EELWVDRSSVNSLRDVAKFHLD-VTIDKAVRDEFGTLDRAGVLGKLDNLLDYCAADVAIT 384
Query: 63 FEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLA 122
V Q + FP FL+ PHPV+ A
Sbjct: 385 HRVYQIV--------------------------------------FPNFLDTCPHPVSFA 406
Query: 123 GMLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHD-DKYKDSLW 181
+ LS+ LPVN W Y + + T+ L+ ++ L+ +QA ++ D +K+ + W
Sbjct: 407 ALRHLSSVILPVNKTWDAYIHNAEATYRALSEAVQERLIGLTEQALAIKDDPEKWGNDPW 466
Query: 182 LWDQDWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRRELVEKFK 241
L DWS +++K+ K K++ +L
Sbjct: 467 LKQLDWSGQEIKMVKG---------------------------------KKKNDL----- 488
Query: 242 PLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIPGPS 301
P + + P G P+WY+ L K DA P
Sbjct: 489 PRPAARQKKP-------GMPQWYKDLFPK-----NDA---------------------PI 515
Query: 302 LISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYS 338
++ +I P LL L+W + PL + +GW + V S
Sbjct: 516 NLTVRTRIAPILLKLSWDNHPLFWSDKYGWTFRVERS 552
>gi|429857176|gb|ELA32055.1| DNA polymerase gamma [Colletotrichum gloeosporioides Nara gc5]
Length = 1143
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 211/497 (42%), Positives = 298/497 (59%), Gaps = 52/497 (10%)
Query: 406 DKKKLAEASSTDTSTDDADTPREIG-FIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGV 464
+KK++ + +D S DAD R+ G F KLPHKDG NP+++ +++ F +L+
Sbjct: 551 EKKQMVKCDFSD-SEKDADLRRDGGAFFKLPHKDGPLARCTNPMAKGYLSYFESGTLSSQ 609
Query: 465 DIGAKRIIEISRMLSYWRNNHERVKKQFVVWLNKKDLPRRLVEN-IESEGRD-------Y 516
AK+ +E++ SYW + +R+ Q VV+ + D+P ++ N ++S+G
Sbjct: 610 YPYAKQALEMNASCSYWISARDRITSQMVVY--EDDVPGKVSSNGVKSKGPVSKSPEDVQ 667
Query: 517 GVILPQLIVSGTLTRRAVEATWMTASNAVGERVGSELRAMIQAPDGYSIIGADVDSQELW 576
G ILPQ+I GT+TRRAVE TW+TASNA RVGSEL+AM++AP GYS +GADVDS+ELW
Sbjct: 668 GFILPQVIPMGTITRRAVENTWLTASNAKKNRVGSELKAMVKAPPGYSFVGADVDSEELW 727
Query: 577 IASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMHSITAKAVGISREHAKIINYARIYGA 636
IAS++GD+ K HG +G+MTL G K+ TD+HS TA +GI+R AK+ NY RIYGA
Sbjct: 728 IASLVGDA-TFKLHGGNAIGFMTLEGTKAAGTDLHSRTASILGITRNDAKVFNYGRIYGA 786
Query: 637 GERFAERLLKQFNPEMSKSDAKSKARKMYTLTKGKKLYRLKDGHLEELIKRVYSKYEARE 696
G +FA +LL+QFNP ++ + A K+Y TKG K R V SK
Sbjct: 787 GLKFAGQLLRQFNPNLTDKETNETAAKLYVRTKGTKTTR-----------SVLSK----- 830
Query: 697 VCSAYNTSVDKIFDKPQWYGGTESAMFNRLEEIATSLQPVTPFLNCRLSRALEPVSEDDS 756
+P W GGTES +FN+LEE A +P T L ++ AL + +
Sbjct: 831 --------------RPFWRGGTESFVFNKLEEFAAQERPRTFVLGAGITEALMRRFINQN 876
Query: 757 KFIQTRINWVVQSGAVDFLHLMLVCMRWLVSR---DTRFVISIHDEIRYLVPDEEKYETA 813
++ +RINW +QS VD+LHL++V M +L R + R I++HDEIRYLV D +KY A
Sbjct: 877 GYLTSRINWAIQSSGVDYLHLLIVSMDYLTRRFNIEARLAITVHDEIRYLVKDHDKYRAA 936
Query: 814 LALHVTNLLTRAFCIKKLDMTDIPLSISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGY 873
+AL V NL TRA +++ + D+P + ++FS ++ID VLRKE D DC TPS+
Sbjct: 937 MALQVANLWTRAMFAQQVGINDLPQACAYFSAIDIDHVLRKEVDMDCVTPSH------KE 990
Query: 874 GIPLGEILDIYQTIDKA 890
IP GE LDI + K
Sbjct: 991 AIPPGESLDIAALLAKG 1007
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 75/333 (22%), Positives = 121/333 (36%), Gaps = 111/333 (33%)
Query: 4 ESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLATF 63
E W SS+NSL +V K + + +DK R+ E+I NL+ YCA D T
Sbjct: 320 ELWVERSSVNSLRDVAKFHLD-VTIDKAIRDDLGTHDREEILQKLDNLLDYCAADVAITH 378
Query: 64 EVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLAG 123
V Q + FP FL+ PHPV+ A
Sbjct: 379 RVYQIV--------------------------------------FPNFLDTCPHPVSFAA 400
Query: 124 MLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHD-DKYKDSLWL 182
+ L++ LPVN +W Y + T+ +L+ ++ L+ ++A + D +K+ + WL
Sbjct: 401 LRHLASVILPVNKSWDAYIANAEATYRELSDAVQERLIGLTEKALEIKDDQEKWSNDPWL 460
Query: 183 WDQDWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRRELVEKFKP 242
DWS +++K+ K K + P R + KP
Sbjct: 461 KQLDWSGQEIKMVKGKKK-------NDPP----------------------RPAARQKKP 491
Query: 243 LMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIPGPSL 302
G P+WY+ L K DA P
Sbjct: 492 ----------------GMPQWYKDLFAK-----NDA---------------------PIN 509
Query: 303 ISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLV 335
++ ++ P LL ++W + PL + +GW + V
Sbjct: 510 LTVRTRVAPLLLKMSWDNHPLVWSEKYGWTFRV 542
>gi|358381148|gb|EHK18824.1| hypothetical protein TRIVIDRAFT_43834 [Trichoderma virens Gv29-8]
Length = 1102
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 200/463 (43%), Positives = 280/463 (60%), Gaps = 40/463 (8%)
Query: 431 FIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEISRMLSYWRNNHERVKK 490
+ KLPHKDG NP+++ ++N F + +L+ AK +E++ SYW + +R++
Sbjct: 540 YFKLPHKDGPTARCSNPMAKGYLNYFENGTLSSEYEYAKEALEMNASCSYWMSARDRIRS 599
Query: 491 QFVVWLNKKDLPRRLVENIESEGRDYGVILPQLIVSGTLTRRAVEATWMTASNAVGERVG 550
Q VV+ + ++ + +E + G ILPQ+I GT+TRRAVE TW+TASNA RVG
Sbjct: 600 QMVVYEHDIFATKKEAKEMEVGEKRQGFILPQVIPMGTITRRAVEITWLTASNAKKNRVG 659
Query: 551 SELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDM 610
SEL++M++APDGY +GADVDS+ELWIAS++GD+ K HG +G+MTL G K+ TD+
Sbjct: 660 SELKSMVKAPDGYCFVGADVDSEELWIASLVGDA-TFKIHGGNAIGFMTLEGTKAAGTDL 718
Query: 611 HSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKG 670
HS TA +GI+R AK+ NY RIYGAG +FA LL+QFNP +S+ + A+++Y TKG
Sbjct: 719 HSRTAAILGITRNDAKVFNYGRIYGAGLKFAATLLRQFNPALSEQETMDIAKRLYANTKG 778
Query: 671 KKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQWYGGTESAMFNRLEEIA 730
K C A N + F W GGTES +FN+LEE A
Sbjct: 779 TKTK-----------------------CKAIN---EHTF----WRGGTESFVFNKLEEFA 808
Query: 731 TSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLVCMRWLVSR-- 788
TP L +++AL ++ +RINW +QS VD+LHL++V M +L+ R
Sbjct: 809 EQDWARTPVLGAGITQALMSRFVSKGSYLPSRINWAIQSSGVDYLHLLIVSMDYLIRRFN 868
Query: 789 -DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIPLSISFFSGVE 847
D R I++HDEIRYLV +E+KY ALAL V N+ TRA +++ + D+P S +FFS V+
Sbjct: 869 LDARLAITVHDEIRYLVKNEDKYRAALALQVANIWTRAMFAQQVGINDLPQSCAFFSAVD 928
Query: 848 IDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKA 890
ID VLRKE + DC TPS+ IP GE LDI +DK
Sbjct: 929 IDHVLRKEVNMDCITPSHE------TPIPHGESLDIQTLLDKG 965
Score = 70.5 bits (171), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 85/209 (40%), Gaps = 40/209 (19%)
Query: 3 DESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLAT 62
+E W SS+NSL +V K + + DK+ R+ FVE + I L+ YCA D T
Sbjct: 284 EELWLEKSSINSLQDVAKFHLNATI-DKSTRDDFVELDRKVILEKLDRLLEYCAADVSTT 342
Query: 63 FEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLA 122
+V Q + P FL PHPV+ A + L
Sbjct: 343 HKVYQIVLPSFLNVCPHPVSFAALRHL--------------------------------- 369
Query: 123 GMLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDK-YKDSLW 181
S+ LPVN W Y + T+ L ++ L + ++A + + +K+ W
Sbjct: 370 -----SSVILPVNETWESYLAHADATYEKLTASVQKRLEELANKALEIKEKPEIWKNDPW 424
Query: 182 LWDQDWSVKDLKLKKKANKTLSVDQETEE 210
+ DWS +++++ K + Q+ +
Sbjct: 425 MMQLDWSGQEIRMVGGKRKNDPIRQDGRQ 453
>gi|68478473|ref|XP_716738.1| hypothetical protein CaO19.3431 [Candida albicans SC5314]
gi|68478594|ref|XP_716679.1| hypothetical protein CaO19.10935 [Candida albicans SC5314]
gi|46438355|gb|EAK97687.1| hypothetical protein CaO19.10935 [Candida albicans SC5314]
gi|46438419|gb|EAK97750.1| hypothetical protein CaO19.3431 [Candida albicans SC5314]
Length = 1228
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 204/498 (40%), Positives = 290/498 (58%), Gaps = 49/498 (9%)
Query: 401 IANVLDKK----KLAEASSTDTSTDDADTPREIGFIKLPHKDGEHLNVGNPLSRDFINKF 456
IA + +KK KL E +T + K+PH +G + LS+ ++ F
Sbjct: 595 IARLTEKKYVQPKLTEEELMETRDALLTKGKSYVLFKVPHPNGPSSRCTHILSKLYVRNF 654
Query: 457 SDNSLAGVDIGAKRIIEISRMLSYWRNNHERVKKQFVVWLNKKDLPRRLVENIES--EGR 514
D +L A +I+ ++ SYW N R+K QFVV+ + + + I+ E
Sbjct: 655 EDGTLTSEYDYATKILNLNNEASYWLGNRNRIKDQFVVY--NQQGKNKFFDTIKKSKEHS 712
Query: 515 DYGVILPQLIVSGTLTRRAVEATWMTASNAVGERVGSELRAMIQAPDGYSIIGADVDSQE 574
G+I+P L GT+TRRA E TW+TASNA R+GSEL+++++AP GY +GADVDS+E
Sbjct: 713 SMGIIIPNLATMGTITRRATENTWLTASNAKKNRIGSELKSLVEAPKGYCFVGADVDSEE 772
Query: 575 LWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMHSITAKAVGISREHAKIINYARIY 634
LWIAS++GDS + HG T LGWMTL G+KS TD+HS TA +GISR AK+ NY RIY
Sbjct: 773 LWIASLVGDSML-QIHGGTALGWMTLEGEKSQKTDLHSKTASILGISRNDAKVFNYGRIY 831
Query: 635 GAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKGKKLYRLKDGHLEELIKRVYSKYEA 694
GAG +FA RLLKQFN ++ +A AR++Y TKG+
Sbjct: 832 GAGVKFATRLLKQFNANITDEEADKVARQLYDSTKGR----------------------- 868
Query: 695 REVCSAYNTSVDKIFDKPQWYGGTESAMFNRLEEIATSLQPVTPFLNCRLSRALEPVSED 754
T+V K +YGGTES MFN LE IA +P TP L ++ AL + +
Sbjct: 869 --------TAVSKYLPSRIYYGGTESIMFNALEAIAQQEEPKTPVLGASITDALNVKNLN 920
Query: 755 DSKFIQTRINWVVQSGAVDFLHLMLVCMRWLVSR---DTRFVISIHDEIRYLVPDEEKYE 811
++++ +R+NW +QS VD+LHL+++ M +L+ + D R I++HDE+RYLV + +KY+
Sbjct: 921 TNQYMTSRVNWTIQSSGVDYLHLLIISMEYLIEKYGIDARLAITVHDELRYLVKETDKYK 980
Query: 812 TALALHVTNLLTRAFCIKKLDMTDIPLSISFFSGVEIDKVLRKESDNDCKTPSNPYGLCK 871
AL L ++N+ TRA ++L + ++P S +FFS V+ID VLRKE DC TPSNP
Sbjct: 981 AALLLQISNIWTRAMFCEQLGIKEVPQSCAFFSEVDIDHVLRKEVSMDCVTPSNP----- 1035
Query: 872 GYGIPLGEILDIYQTIDK 889
IPLGE L+I Q + K
Sbjct: 1036 -TPIPLGESLNIGQLLSK 1052
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 104/233 (44%), Gaps = 34/233 (14%)
Query: 1 MTDESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTL 60
+ ++ W + + NSL+ V + +C LDKTDR+ F + +N+ LM YCAKD
Sbjct: 362 VAEDPWLLMGAPNSLANVARFHCNIH-LDKTDRDYFATEDPNLVIDNFPKLMDYCAKDVD 420
Query: 61 ATFEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVT 120
ATFEV + LFP+F++R PHPV+ A + L T LP T + I+A L+
Sbjct: 421 ATFEVTKKLFPVFIQRIPHPVSFAALRLLGTLILPTTTKWPKYIEAAESLY--------- 471
Query: 121 LAGMLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDKYKDSL 180
+ E++T + N+ V + Q D Y++
Sbjct: 472 ESNRQEVATTLQQLANDLVAHIQNKKQVKPD------------------------YENDP 507
Query: 181 WLWDQDWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRR 233
WL +W +K+ +LKK T PE + E+ K + + + +K R
Sbjct: 508 WLSQLNWKLKETRLKKDGTPYKKTAYMTGYPEWYRELFKTSKGEEMNLTLKTR 560
>gi|322699619|gb|EFY91379.1| DNA polymerase gamma [Metarhizium acridum CQMa 102]
Length = 1090
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 199/471 (42%), Positives = 281/471 (59%), Gaps = 45/471 (9%)
Query: 427 REIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEISRMLSYWRNNHE 486
RE + KLPHKDG NP+++ ++ F +L+ AK +E++ SYW + +
Sbjct: 521 REHYYFKLPHKDGPTARCANPMAKGYLRYFETGTLSSEYEYAKEALEMNASCSYWISARD 580
Query: 487 RVKKQFVVWLNKKDLPRRLV---ENIESEGRDYGVILPQLIVSGTLTRRAVEATWMTASN 543
R+ Q VV+ +D+P+ + + +G ILPQ+I GT+TRRAVE TW+TASN
Sbjct: 581 RIMSQMVVY--DEDIPKGQASRRRRTQPKADSHGFILPQVIPMGTITRRAVENTWLTASN 638
Query: 544 AVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQ 603
A RVGSEL+AM++AP GY +GADVDS+ELWIAS++GD+ K HG +G+MTL G
Sbjct: 639 AKKNRVGSELKAMVKAPKGYCFVGADVDSEELWIASLVGDA-TFKIHGGNAIGFMTLEGT 697
Query: 604 KSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARK 663
K+ TD+HS TA +GI+R AK+ NY RIYGAG +FA LL+QFNP +S+ A K
Sbjct: 698 KAAGTDLHSRTAGILGITRNDAKVFNYGRIYGAGLKFAATLLRQFNPSLSERQTMEVASK 757
Query: 664 MYTLTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQWYGGTESAMF 723
+Y TKG K T+ I++KP W GGTES +F
Sbjct: 758 LYANTKGTK------------------------------TNRKVIYNKPFWRGGTESFVF 787
Query: 724 NRLEEIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLVCMR 783
N+LEE A +P TP L ++ AL ++ +RINW +QS VD+LHL++V M
Sbjct: 788 NKLEEFAEQERPRTPVLGAGITEALMSRFISKGGYLTSRINWAIQSSGVDYLHLLIVSMD 847
Query: 784 WLVSR---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIPLSI 840
+L+ R + R I++HDEIRYLV +++KY A+AL V N+ TRA +++ + D+P S
Sbjct: 848 FLIRRFNINARLAITVHDEIRYLVKEQDKYRAAMALQVANVWTRAMFAQQVGINDLPQSC 907
Query: 841 SFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKAN 891
++FS V+ID VLRKE D DC TPS+P + GE LDI ++K +
Sbjct: 908 AYFSAVDIDHVLRKEVDMDCITPSHPTAIAP------GESLDISTLLEKGS 952
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 78/335 (23%), Positives = 121/335 (36%), Gaps = 111/335 (33%)
Query: 3 DESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLAT 62
+E W SS+NSL +V K + + DK R+ F E +DI LM YCA D T
Sbjct: 269 EELWVERSSVNSLRDVAKFHLNVSI-DKAVRDDFGELDRKDILAKLDELMDYCAADVAIT 327
Query: 63 FEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLA 122
V Q +FP FLE PHPV+ A + L
Sbjct: 328 HRVYQIVFPNFLEVCPHPVSFAALRHL--------------------------------- 354
Query: 123 GMLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHD-DKYKDSLW 181
++ LPVN +W Y + T++ L+ ++ L+ ++A + D K+++ W
Sbjct: 355 -----ASVILPVNKSWDVYIANAEATYHKLSDAVQERLVGLTEKALEIKGDVTKWQNDPW 409
Query: 182 LWDQDWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRRELVEKFK 241
+ DWS +++++ K K ++P R + K
Sbjct: 410 MKQLDWSGQEVRMVKGKRK--------DDPP---------------------RPAARQKK 440
Query: 242 PLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIPGPS 301
P G P+WY+ L K S P
Sbjct: 441 P----------------GMPKWYKDLFPKNDS--------------------------PI 458
Query: 302 LISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVP 336
++ +I P LL L W PL + +GW + VP
Sbjct: 459 NVTVRTRIAPLLLRLAWDGHPLFWSDKYGWTFRVP 493
>gi|367027982|ref|XP_003663275.1| hypothetical protein MYCTH_2304990 [Myceliophthora thermophila ATCC
42464]
gi|347010544|gb|AEO58030.1| hypothetical protein MYCTH_2304990 [Myceliophthora thermophila ATCC
42464]
Length = 1198
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 201/464 (43%), Positives = 276/464 (59%), Gaps = 42/464 (9%)
Query: 431 FIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEISRMLSYWRNNHERVKK 490
+ KLPHKDG P+++ +++ F +L+ AK +E++ SYW + +R+
Sbjct: 583 YFKLPHKDGPAARCVTPMAKGYLSYFEKGTLSSEYPYAKEALEMNASCSYWISARDRIMS 642
Query: 491 QFVVWLNKKDLPRRLVENIESEGRDYGVILPQLIVSGTLTRRAVEATWMTASNAVGERVG 550
Q VV+ ++ LP +S G ILPQ+I GT+TRRAVE TW+TASNA RVG
Sbjct: 643 QLVVYQDQ--LPSTAKSEPKSNEPVGGFILPQVIPMGTITRRAVENTWLTASNAKKNRVG 700
Query: 551 SELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDM 610
SEL+AM++AP GY +GADVDS+ELWIASV+GDS K HG +G+MTL G K+ TD+
Sbjct: 701 SELKAMVRAPPGYVFVGADVDSEELWIASVVGDS-TFKIHGGNAIGFMTLEGTKAAGTDL 759
Query: 611 HSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKG 670
HS TA +GI+R AK+ NY RIYGAG +FA +LL+QFNP +S+ D A K+Y TKG
Sbjct: 760 HSRTASILGITRNDAKVFNYGRIYGAGLKFAAQLLRQFNPNLSEKDTLLIASKLYATTKG 819
Query: 671 KKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQWYGGTESAMFNRLEEIA 730
K T+ ++ +P W GGTES +FN+LEE A
Sbjct: 820 TK------------------------------TNRKSLYKRPFWRGGTESFVFNKLEEFA 849
Query: 731 TSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLVCMRWLVSR-- 788
P TP L ++ AL ++ +RINW +QS VD+LHL++V M +L+ R
Sbjct: 850 EQEHPRTPVLGAGITEALNGRFISKGGYLTSRINWAIQSSGVDYLHLLIVAMDYLIRRFN 909
Query: 789 -DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIPLSISFFSGVE 847
R +++HDEIRYLV + +KY A+AL V NL TRA +++ + D+P S +FFS V+
Sbjct: 910 LSARLALTVHDEIRYLVREHDKYRAAMALQVANLWTRAMFAQQVGIHDLPQSCAFFSAVD 969
Query: 848 IDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKAN 891
ID+VLRKE D DC TPSNP IP GE +DI + K +
Sbjct: 970 IDRVLRKEVDMDCVTPSNP------TPIPPGESIDINSLLAKGD 1007
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 81/351 (23%), Positives = 126/351 (35%), Gaps = 111/351 (31%)
Query: 3 DESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLAT 62
+E W SS+NSL +V K + + +DK R+ F E + + L+TYCA D T
Sbjct: 326 EELWVERSSINSLRDVAKFHLD-VTIDKELRDSFGELDRDGVVGKLDELLTYCAADVAVT 384
Query: 63 FEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLA 122
V Q +FP FL PHPV+ A + L
Sbjct: 385 HRVYQIVFPNFLRVCPHPVSFAALRHL--------------------------------- 411
Query: 123 GMLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHD-DKYKDSLW 181
S+ LPV+ +W Y + T++ L+ ++ L+ ++A + D +K+ + W
Sbjct: 412 -----SSVILPVDKSWDSYLANAEATYHKLSDAVQERLVFLTEKALEIKDDPEKWGNDPW 466
Query: 182 LWDQDWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRRELVEKFK 241
+ DWS +++K+ K K + P R + K
Sbjct: 467 MKQLDWSGQEIKMVKGKKK-------NDPP----------------------RPAARQKK 497
Query: 242 PLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIPGPS 301
P G P+WY+ L K S P
Sbjct: 498 P----------------GMPQWYKDLFPKMDS--------------------------PI 515
Query: 302 LISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTDIKVPDAENIPLE 352
IS +I P LL L W PL + HGW + VP + D + +P +
Sbjct: 516 NISVRTRIAPLLLRLAWDGYPLFWSDKHGWTFRVPRDEAKRYTDRQMVPCD 566
>gi|380486746|emb|CCF38500.1| DNA polymerase gamma, partial [Colletotrichum higginsianum]
Length = 1035
Score = 374 bits (961), Expect = e-100, Method: Compositional matrix adjust.
Identities = 206/491 (41%), Positives = 292/491 (59%), Gaps = 46/491 (9%)
Query: 407 KKKLAEASSTDTSTDDADTPREIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDI 466
+K++ + +DT +D A F KLPHKDG NP+++ +++ F +L+
Sbjct: 446 QKQMIQCDFSDTESDAALQEDGGLFFKLPHKDGPMARCVNPMAKGYLSYFEKGTLSSEYP 505
Query: 467 GAKRIIEISRMLSYWRNNHERVKKQFVVWLNKKDLPRRLVENIESEGRD----YGVILPQ 522
AK +E++ SYW + +R++ Q VV+ + D+P E + RD G ILPQ
Sbjct: 506 YAKEALEMNASCSYWISARDRIRSQMVVY--EDDIPGEGKEASSKKKRDPEHVQGYILPQ 563
Query: 523 LIVSGTLTRRAVEATWMTASNAVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIG 582
+I GT+TRRAVE TW+TASNA RVGSEL++M++AP GYS +GADVDS+ELWIAS++G
Sbjct: 564 IIPMGTITRRAVENTWLTASNAKKNRVGSELKSMVKAPPGYSFVGADVDSEELWIASLVG 623
Query: 583 DSYCAKEHGATPLGWMTLSGQKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAE 642
D+ K HG +G+MTL G K+ TD+HS TA +GI+R AK+ NY RIYGAG +FA
Sbjct: 624 DA-TFKLHGGNAIGFMTLEGTKAAGTDLHSRTASILGITRNDAKVFNYGRIYGAGLKFAG 682
Query: 643 RLLKQFNPEMSKSDAKSKARKMYTLTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYN 702
+LL+QFNP +S+ + A ++Y TKG K R V SK
Sbjct: 683 QLLRQFNPNLSEKETNETASRLYAKTKGTKTSR-----------SVLSK----------- 720
Query: 703 TSVDKIFDKPQWYGGTESAMFNRLEEIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTR 762
+P W GGTES +FN+LEE A +P T L ++ AL + + ++ +R
Sbjct: 721 --------RPFWRGGTESFVFNKLEEFAAQERPRTFVLGAGITEALMRRFINQNGYLTSR 772
Query: 763 INWVVQSGAVDFLHLMLVCMRWLVSR---DTRFVISIHDEIRYLVPDEEKYETALALHVT 819
INW +QS VD+LHL++V M +L R D R I++HDEIRYLV D +KY A+AL V
Sbjct: 773 INWAIQSSGVDYLHLLIVGMDYLTRRFNIDARLAITVHDEIRYLVRDHDKYRAAMALQVA 832
Query: 820 NLLTRAFCIKKLDMTDIPLSISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGE 879
N+ TRA +++ + D+P S+++FS ++ID VLRKE D DC TPS+ IP GE
Sbjct: 833 NVWTRAMFAQQVGINDLPQSVAYFSAIDIDHVLRKEVDMDCVTPSH------KTAIPPGE 886
Query: 880 ILDIYQTIDKA 890
+DI + K
Sbjct: 887 SIDITALLAKG 897
Score = 82.8 bits (203), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 78/337 (23%), Positives = 124/337 (36%), Gaps = 111/337 (32%)
Query: 3 DESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLAT 62
+E W + SS+NSL +V K + + +DK R+ F + NL+ YCA D T
Sbjct: 213 EELWVDRSSVNSLRDVAKFHLD-VTIDKAVRDEFGTLDRAGVLGKLDNLLDYCAADVAIT 271
Query: 63 FEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLA 122
V Q + FP FL+ PHPV+ A
Sbjct: 272 HRVYQIV--------------------------------------FPNFLDTCPHPVSFA 293
Query: 123 GMLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHD-DKYKDSLW 181
+ LS+ LPVN W Y + + T+ +L+ ++ L+ +QA ++ D +K+ + W
Sbjct: 294 ALRHLSSVILPVNKTWDAYIHNAEATYRELSDAVQERLIGLTEQALAIKDDPEKWGNDPW 353
Query: 182 LWDQDWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRRELVEKFK 241
L DWS +++K+ K K +P
Sbjct: 354 LKQLDWSGQEIKMVKGKKKN--------DP------------------------------ 375
Query: 242 PLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIPGPS 301
P + ++P G P+WY+ L K S P
Sbjct: 376 PRPAARQKMP-------GMPQWYKDLFPKNDS--------------------------PI 402
Query: 302 LISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYS 338
I+ +I P LL L+W + PL + +GW + V S
Sbjct: 403 NITVRTRIAPILLKLSWDNHPLFWSDKYGWTFRVAAS 439
>gi|302497375|ref|XP_003010688.1| hypothetical protein ARB_03390 [Arthroderma benhamiae CBS 112371]
gi|291174231|gb|EFE30048.1| hypothetical protein ARB_03390 [Arthroderma benhamiae CBS 112371]
Length = 1138
Score = 374 bits (960), Expect = e-100, Method: Compositional matrix adjust.
Identities = 206/470 (43%), Positives = 288/470 (61%), Gaps = 45/470 (9%)
Query: 427 REIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEISRMLSYWRNNHE 486
R+ + KLPHKDG +PLS+ ++ F L+ AK +E++ SYW + +
Sbjct: 579 RDHVYFKLPHKDGPDARCASPLSKGYLQYFESGKLSSQFPLAKEALEMNASCSYWISARD 638
Query: 487 RVKKQFVVWLNKKDLPRR--LVENIESEGRDYGVILPQLIVSGTLTRRAVEATWMTASNA 544
R+ Q VV+ KKDL + L + + + + G ILPQ+I GT+TRRAVE TW+TASNA
Sbjct: 639 RITSQMVVY--KKDLEKTGTLGKGLSLDSK-VGFILPQVIPMGTITRRAVENTWLTASNA 695
Query: 545 VGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQK 604
RVGSEL+AM++AP GY +GADVDS+ELWIAS++GD+ + HG +G+MTL G K
Sbjct: 696 KPNRVGSELKAMVRAPPGYVFVGADVDSEELWIASLVGDAQF-QLHGGNAIGFMTLEGTK 754
Query: 605 SNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKM 664
+ TD+HS TAK +GISR +AK+ NY RIYGAG +FA LL+QFNP MS+++ K+ A K+
Sbjct: 755 AAGTDLHSKTAKILGISRNNAKVFNYGRIYGAGLKFAATLLRQFNPSMSEAETKAVAAKL 814
Query: 665 YTLTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQWYGGTESAMFN 724
Y TKG + R R+ S + P GGTES +FN
Sbjct: 815 YKETKGTRTTR-----------RILS-------------------ENPFLRGGTESFVFN 844
Query: 725 RLEEIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLVCMRW 784
+LEE A +P TP L ++ AL + F+ +RINW +QS VD+LHL+++ M +
Sbjct: 845 KLEEFAEQERPRTPVLGAGITEALMRRFINKGGFMTSRINWAIQSSGVDYLHLLIISMDY 904
Query: 785 LVSR---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIPLSIS 841
L+ R D R I++HDEIRY+V + +KY+ A+AL V NL TRA +++ + D+P S +
Sbjct: 905 LIRRFNLDARLAITVHDEIRYVVRETDKYKAAMALQVANLWTRAMFSQQMGIDDLPQSCA 964
Query: 842 FFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKAN 891
FFS V+ID VLRKE + DC TPS+P IP GE LDI + + K +
Sbjct: 965 FFSAVDIDHVLRKEVNMDCVTPSHP------NKIPHGESLDINELLSKGD 1008
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/337 (24%), Positives = 124/337 (36%), Gaps = 115/337 (34%)
Query: 3 DESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLAT 62
+E W SS+NSL +V K +C +DK RN F E E I L+ YCA D T
Sbjct: 326 EELWVGRSSVNSLRDVAKFHC-NITIDKAQRNYFGELDREGINGQLDELLDYCAADVAIT 384
Query: 63 FEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLA 122
V + +FP FLE PHPV+ A + LS
Sbjct: 385 HRVYKKVFPNFLETCPHPVSFAALRHLS-------------------------------- 412
Query: 123 GMLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDK---YKDS 179
T LPVN W +Y + T++ ++ L++ C+ A + DK Y++
Sbjct: 413 ------TVILPVNETWGEYLKNAEDTYHRALDNVQKRLVELCENALKV--KDKPEIYQND 464
Query: 180 LWLWDQDWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRRELVEK 239
WL DWS +++++ K K G+
Sbjct: 465 PWLRQLDWSGQEIRMVKG--------------------KKKGD----------------- 487
Query: 240 FKPLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIPG 299
P + +LP G P+WY+ L SK ++
Sbjct: 488 -PPRPAARQKLP-------GMPKWYKDLF---------PTSKSDIN-------------- 516
Query: 300 PSLISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVP 336
I+ +I+P LL+L+W PL + HGW + VP
Sbjct: 517 ---ITVRTRISPILLNLSWDGFPLVWSDKHGWTFEVP 550
>gi|345560316|gb|EGX43441.1| hypothetical protein AOL_s00215g177 [Arthrobotrys oligospora ATCC
24927]
Length = 1370
Score = 374 bits (959), Expect = e-100, Method: Compositional matrix adjust.
Identities = 230/653 (35%), Positives = 326/653 (49%), Gaps = 144/653 (22%)
Query: 250 LPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIPGPSLISTSMQI 309
+P L GYP WY+ L +D S IS ++
Sbjct: 688 VPYAKQKLPGYPNWYKDL------------------FKTSTDMS---------ISVRTRV 720
Query: 310 TPKLLSLTWKSMPLHFIRGHGWGYLVPYSTDIKVPDAENIPLEQLKQLYNNITKQDNCEA 369
+ +L L W PL + +GW + VP S K
Sbjct: 721 SALMLRLQWDGYPLVWTDKYGWTFRVPNSEVYKY-------------------------- 754
Query: 370 NVDNAQNSLRDSVETNISFIDCSKSAKRLEVIANVLDKKKLAEASSTDTSTDDADTPREI 429
TN + C +VLD L + +TD+ +
Sbjct: 755 --------------TNTPMVQC-----------DVLD---LINEPNPHVATDN-----QA 781
Query: 430 GFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEISRMLSYWRNNHERVK 489
+ KLPH G+ NPL++ + F D L AK ++++ SYW + ER+K
Sbjct: 782 VYFKLPHNGGKDARCVNPLAKSYQRYFEDGVLTSEFPQAKEALDMNAACSYWISARERIK 841
Query: 490 KQFVVWLNK---KDLPRRLVENI---------------------ESEGRDYGVILPQLIV 525
QFVVW +K +D+ +E+ +S+ + G+ILPQ++
Sbjct: 842 SQFVVWEDKGIGRDIGFESLEDSKISQSRLAAHAVNLATEPGSEQSDQNELGLILPQIVT 901
Query: 526 SGTLTRRAVEATWMTASNAVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSY 585
GT+TRRA+E TW+TASNA RVGSEL+AMIQAP GY +GADVDS+ELWIAS+IGD+
Sbjct: 902 MGTITRRAIENTWLTASNAKKNRVGSELKAMIQAPPGYCFVGADVDSEELWIASLIGDAE 961
Query: 586 CAKEHGATPLGWMTLSGQKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLL 645
K HG +G+MTL G K+ TDMHS TA +GISR +AK+ NY RIYGAG +FA LL
Sbjct: 962 F-KMHGGNAIGFMTLEGSKAAGTDMHSRTASVLGISRNNAKVFNYGRIYGAGLKFAASLL 1020
Query: 646 KQFNPEMSKSDAKSKARKMYTLTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSV 705
+QFNP +++S A A +Y +TKG K T+
Sbjct: 1021 RQFNPNVNESQANEIAGNLYVVTKGIK------------------------------TTR 1050
Query: 706 DKIFDKPQWYGGTESAMFNRLEEIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINW 765
+ DK W GGTES +FN+LEE A P TP L ++ AL+ F+ +RINW
Sbjct: 1051 KLLSDKAFWRGGTESFVFNKLEEFAEQDFPKTPVLGAGITEALQKNHIGKGAFLTSRINW 1110
Query: 766 VVQSGAVDFLHLMLVCMRWLVSR---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLL 822
+QS VD+LHL++V M +L+ + + R +I++HDEIRY+V +++Y+ A+AL V N+
Sbjct: 1111 AIQSSGVDYLHLLIVSMDYLIQQYKLNARLMITVHDEIRYIVQLDDRYKVAMALQVANIW 1170
Query: 823 TRAFCIKKLDMTDIPLSISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGI 875
TR+ +++ + D+P S +FFS V+ID VLRKE D DC TPSNP + G +
Sbjct: 1171 TRSMFSQQMGINDLPQSCAFFSAVDIDHVLRKEVDLDCVTPSNPDKIKSGESV 1223
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 66/167 (39%), Gaps = 38/167 (22%)
Query: 4 ESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLATF 63
E W + SS+NSL +V +C +V +T + +ED+ + YCA D T
Sbjct: 370 EIWVDHSSINSLKDVAMFHCNIQVSKETRDMMGEMMKVEDLVPKLQECLAYCAYDVKVTH 429
Query: 64 EVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLAG 123
+V + + P FLE PHPV+ +
Sbjct: 430 DVYKKVLPRFLETCPHPVS--------------------------------------FSA 451
Query: 124 MLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSL 170
+ + + LPVN +W Y S +N L ++K+ L +QA +L
Sbjct: 452 LRHMGSLLLPVNQSWSNYIANSEAIYNGLVTKVKNHLESLTEQAAAL 498
>gi|401882775|gb|EJT47019.1| gamma DNA-directed DNA polymerase [Trichosporon asahii var. asahii
CBS 2479]
Length = 1331
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 208/475 (43%), Positives = 281/475 (59%), Gaps = 61/475 (12%)
Query: 427 REIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAG---------VDIGAKRIIEISRM 477
++ F +LPHKDGE NVGNPLS+ F+ L+ + AK ++ +
Sbjct: 799 KDYAFFQLPHKDGEGNNVGNPLSKSFLKAVESGELSSALADDEDKQLASAAKAATNMNAL 858
Query: 478 LSYWRNNHERVKKQFVVWLNKKDLPRRLVENIESEGRDYGVILPQLIVSGTLTRRAVEAT 537
SYW ++ ER+ QFVV+ + +G D G+ILPQ+I GT+TRRAVEAT
Sbjct: 859 CSYWISSRERIMNQFVVY--------------DKDG-DRGMILPQVITMGTVTRRAVEAT 903
Query: 538 WMTASNAVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGW 597
W+TASNA RVGSEL+++++AP GY+I+GADVDS+ELWI+SV+GDS HGAT +GW
Sbjct: 904 WLTASNAKKNRVGSELKSLVKAPPGYAIVGADVDSEELWISSVMGDSQFGM-HGATAIGW 962
Query: 598 MTLSGQKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDA 657
MTL G KS TD+HS TA + ISR+ AK+ NY+RIYGAG+ A +LL Q + +++K A
Sbjct: 963 MTLEGTKSAGTDLHSKTASILNISRDAAKVFNYSRIYGAGKPHAIQLLLQGDGKLTKEAA 1022
Query: 658 KSKARKMYTLTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQWYGG 717
A +Y TKG K +R K S Y W+GG
Sbjct: 1023 DELATNLYKQTKGAKTFRSKG---------------RGPAASQY-----------LWHGG 1056
Query: 718 TESAMFNRLEEIATSLQPVTPFLNCRLSRALEPVSEDDS-KFIQTRINWVVQSGAVDFLH 776
+ES +FN LE IA +P TP L C ++RAL D ++ +RINWVVQS VD+LH
Sbjct: 1057 SESYLFNTLEAIALMDRPTTPALGCGVTRALRKSFLDAGHSYLPSRINWVVQSSGVDYLH 1116
Query: 777 LMLVCMRWLVSR---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDM 833
L++ M +L + R++IS+HDE+RYL +E+K TALAL + N TRA L +
Sbjct: 1117 LLITSMEYLTKKYDIKARYLISVHDEVRYLAAEEDKLRTALALQIANAWTRALFCYNLGL 1176
Query: 834 TDIPLSISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTID 888
D+P I+FFS V+ID +LRKE+D C TPS+ IP GE LDI Q +D
Sbjct: 1177 DDMPQGIAFFSAVDIDHILRKETDMPCVTPSS------AEAIPPGESLDIKQLLD 1225
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 90/211 (42%), Gaps = 45/211 (21%)
Query: 4 ESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSL---EDIENNWHNLMTYCAKDTL 60
++W + +++NSL+EV +L+C KV DKT R+ F + + + +L+ YCAKD
Sbjct: 350 QTWEDTTAVNSLAEVARLHCGVKV-DKTVRDRFGDEDILHASQLRPELDDLLRYCAKD-- 406
Query: 61 ATFEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVT 120
+Q T +V + + PLF+ PHP T
Sbjct: 407 -----VQI-------------------------------THDVYKVVLPLFMNSCPHPAT 430
Query: 121 LAGMLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDKYKDSL 180
AG+L + +A+LPV+ NW KY + + L E++ L D+ L +
Sbjct: 431 FAGVLAMGSAFLPVDRNWEKYLKNAESMYIKLRTEVRQALRTLADR---LRREGPNDQDP 487
Query: 181 WLWDQDWSVKDLKLKKKANKTLSVDQETEEP 211
W DW+ K + + V + T EP
Sbjct: 488 WSSQLDWTPKKARWSDGTSHIAPVVESTPEP 518
>gi|406700574|gb|EKD03740.1| gamma DNA-directed DNA polymerase [Trichosporon asahii var. asahii
CBS 8904]
Length = 1331
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 208/475 (43%), Positives = 281/475 (59%), Gaps = 61/475 (12%)
Query: 427 REIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAG---------VDIGAKRIIEISRM 477
++ F +LPHKDGE NVGNPLS+ F+ L+ + AK ++ +
Sbjct: 799 KDYAFFQLPHKDGEGNNVGNPLSKSFLKAVESGELSSALADDEDKQLASAAKAATNMNAL 858
Query: 478 LSYWRNNHERVKKQFVVWLNKKDLPRRLVENIESEGRDYGVILPQLIVSGTLTRRAVEAT 537
SYW ++ ER+ QFVV+ + +G D G+ILPQ+I GT+TRRAVEAT
Sbjct: 859 CSYWISSRERIMNQFVVY--------------DKDG-DRGMILPQVITMGTVTRRAVEAT 903
Query: 538 WMTASNAVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGW 597
W+TASNA RVGSEL+++++AP GY+I+GADVDS+ELWI+SV+GDS HGAT +GW
Sbjct: 904 WLTASNAKKNRVGSELKSLVKAPPGYAIVGADVDSEELWISSVMGDSQFGM-HGATAIGW 962
Query: 598 MTLSGQKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDA 657
MTL G KS TD+HS TA + ISR+ AK+ NY+RIYGAG+ A +LL Q + +++K A
Sbjct: 963 MTLEGTKSAGTDLHSKTASILNISRDAAKVFNYSRIYGAGKPHAIQLLLQGDGKLTKEAA 1022
Query: 658 KSKARKMYTLTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQWYGG 717
A +Y TKG K +R K S Y W+GG
Sbjct: 1023 DELATNLYKQTKGAKTFRSKG---------------RGPAASQY-----------LWHGG 1056
Query: 718 TESAMFNRLEEIATSLQPVTPFLNCRLSRALEPVSEDDS-KFIQTRINWVVQSGAVDFLH 776
+ES +FN LE IA +P TP L C ++RAL D ++ +RINWVVQS VD+LH
Sbjct: 1057 SESYLFNTLEAIALMDRPTTPALGCGVTRALRKSFLDAGHSYLPSRINWVVQSSGVDYLH 1116
Query: 777 LMLVCMRWLVSR---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDM 833
L++ M +L + R++IS+HDE+RYL +E+K TALAL + N TRA L +
Sbjct: 1117 LLITSMEYLTKKYDIKARYLISVHDEVRYLAAEEDKLRTALALQIANAWTRALFCYNLGL 1176
Query: 834 TDIPLSISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTID 888
D+P I+FFS V+ID +LRKE+D C TPS+ IP GE LDI Q +D
Sbjct: 1177 DDMPQGIAFFSAVDIDHILRKETDMPCVTPSS------AEAIPPGESLDIKQLLD 1225
Score = 77.4 bits (189), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 90/211 (42%), Gaps = 45/211 (21%)
Query: 4 ESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSL---EDIENNWHNLMTYCAKDTL 60
++W + +++NSL+EV +L+C KV DKT R+ F + + + +L+ YCAKD
Sbjct: 350 QTWEDTTAVNSLAEVARLHCGVKV-DKTVRDRFGDEDILHASQLRPELDDLLRYCAKD-- 406
Query: 61 ATFEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVT 120
+Q T +V + + PLF+ PHP T
Sbjct: 407 -----VQI-------------------------------THDVYKVVLPLFMNSCPHPAT 430
Query: 121 LAGMLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDKYKDSL 180
AG+L + +A+LPV+ NW KY + + L E++ L D+ L +
Sbjct: 431 FAGVLAMGSAFLPVDRNWEKYLKNAESMYIKLRTEVRQALRTLADR---LRREGPNDQDP 487
Query: 181 WLWDQDWSVKDLKLKKKANKTLSVDQETEEP 211
W DW+ K + + V + T EP
Sbjct: 488 WSSQLDWTPKKARWSDGTSHIAPVVESTPEP 518
>gi|302902991|ref|XP_003048764.1| hypothetical protein NECHADRAFT_105050 [Nectria haematococca mpVI
77-13-4]
gi|256729698|gb|EEU43051.1| hypothetical protein NECHADRAFT_105050 [Nectria haematococca mpVI
77-13-4]
Length = 1143
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 202/473 (42%), Positives = 279/473 (58%), Gaps = 46/473 (9%)
Query: 430 GFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEISRMLSYWRNNHERVK 489
F KLPHKDG NP+++ ++ F + +L+ AK +E++ SYW + +R++
Sbjct: 574 AFFKLPHKDGPTARCTNPMAKGYLAYFENGTLSSEYSYAKEALEMNASCSYWISARDRIR 633
Query: 490 KQFVVW---LNKKDLPRRLVENIESEGRDY---GVILPQLIVSGTLTRRAVEATWMTASN 543
Q VV+ L N SE + G ILPQ+I GT+TRRAVE TW+TASN
Sbjct: 634 SQMVVYQEDLTNGQSSLETEPNSTSETKAANTDGFILPQIIPMGTITRRAVENTWLTASN 693
Query: 544 AVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQ 603
A RVGSEL+AM++AP GY +GADVDSQELWIAS++GD+ K HG +G+MTL G
Sbjct: 694 AKKNRVGSELKAMVKAPKGYCFVGADVDSQELWIASLVGDA-TFKLHGGNAVGFMTLEGT 752
Query: 604 KSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARK 663
KS TD+HS TA +GISR +AK+ NY RIYGAG +FA LL+QFNP++S+ A +
Sbjct: 753 KSQGTDLHSRTASILGISRNNAKVFNYGRIYGAGLKFAATLLRQFNPDLSERQTTETASR 812
Query: 664 MYTLTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQWYGGTESAMF 723
+Y TKG K T+ ++ +P W GGTES +F
Sbjct: 813 LYANTKGTK------------------------------TNRKILYKRPFWRGGTESFVF 842
Query: 724 NRLEEIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLVCMR 783
N+LEE A +P TP L ++ AL + ++ +RINW +QS VD+LHL++V M
Sbjct: 843 NKLEEFAEQERPRTPALGAGITEALMSRYVNKGGYLTSRINWAIQSSGVDYLHLLIVGMD 902
Query: 784 WLVSR---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIPLSI 840
+L+ R D R I++HDEIRYLV +E+KY ALAL V N+ TRA +++ + D+P S
Sbjct: 903 YLIRRFNIDARVAITVHDEIRYLVKEEDKYRAALALQVVNVWTRAMFAQQVGIEDLPQSC 962
Query: 841 SFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKANGV 893
++FS V+ID VLRKE D +C TPS+ IP GE +DI ++K
Sbjct: 963 AYFSAVDIDHVLRKEVDMECITPSH------QTPIPPGESIDITTLLEKGEAA 1009
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 82/335 (24%), Positives = 122/335 (36%), Gaps = 111/335 (33%)
Query: 3 DESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLAT 62
+E W SS+NSL +V K + + DK R+ F E E I LM YCA D
Sbjct: 319 EELWVERSSINSLRDVAKFHLNISI-DKAVRDDFGELDREGILEKLDELMDYCAAD---- 373
Query: 63 FEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLA 122
V++ T V +FP FL PHPV+ A
Sbjct: 374 ------------------VSI----------------THRVYSIVFPNFLRVCPHPVSFA 399
Query: 123 GMLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLH-DDKYKDSLW 181
+ LS+ LPVN +W Y + T+ L+ ++ L+ ++A + + DDK+++ W
Sbjct: 400 ALRHLSSVILPVNKSWDAYIANAEATYQKLSDAVQERLIGLTEKALEIKNDDDKWENDPW 459
Query: 182 LWDQDWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRRELVEKFK 241
+ DWS +++K+ K K + P R + K
Sbjct: 460 MHQLDWSGQEIKMVKGKRK-------NDPP----------------------RPAARQKK 490
Query: 242 PLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIPGPS 301
P G P+WY+ L K DA P
Sbjct: 491 P----------------GMPKWYKDLFQK-----NDA---------------------PI 508
Query: 302 LISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVP 336
I+ +I P LL L W PL + +GW + VP
Sbjct: 509 NITVRTRIAPLLLKLAWDGHPLFWSNKYGWTFRVP 543
>gi|213406171|ref|XP_002173857.1| DNA polymerase gamma [Schizosaccharomyces japonicus yFS275]
gi|212001904|gb|EEB07564.1| DNA polymerase gamma [Schizosaccharomyces japonicus yFS275]
Length = 1059
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 214/504 (42%), Positives = 298/504 (59%), Gaps = 48/504 (9%)
Query: 401 IANVLDKKK-LAEASST-DTSTDDADTPREIGFIKLPHKDGEHLNVGNPLSRDFINKFSD 458
I +LD+K L E S T D + D + F K+ HK+G NPL++ + F +
Sbjct: 541 IKQLLDRKYVLCEISPTKDPNMDSVN----YTFFKVSHKNGAAARCCNPLTKSYQKYFEN 596
Query: 459 NSLAGVDIGAKRIIEISRMLSYWRNNHERVKKQFVVWLNKKDLPRRLVENIES-EGRDYG 517
+L+ AK + ++ SYW + +R+K Q VVW + L +NI+ + +D G
Sbjct: 597 GTLSSEFQLAKHALSMNATCSYWSSARDRIKNQMVVWNSD------LEQNIDKRQPKDLG 650
Query: 518 VILPQLIVSGTLTRRAVEATWMTASNAVGERVGSELRAMIQAPDGYSIIGADVDSQELWI 577
+ILP +I GT+TRRAVE TW+TASNA R+GSEL+AMI+AP GY +GADVDS+ELWI
Sbjct: 651 LILPSIIPIGTITRRAVENTWLTASNAKKNRLGSELKAMIKAPKGYCFVGADVDSEELWI 710
Query: 578 ASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMHSITAKAVGISREHAKIINYARIYGAG 637
AS+IGDS A HGAT LGWMTL G+KS TD+HS +A +G++R+ AKI NY RIYGAG
Sbjct: 711 ASLIGDSQFAL-HGATALGWMTLEGEKSEKTDLHSKSADILGVTRDAAKIFNYGRIYGAG 769
Query: 638 ERFAERLLKQFNPEMSKSDAKSKARKMYTLTKGKKLYRLKDGHLEELIKRVYSKYEAREV 697
+F +LL+QFN +++ DA A +Y TKG + KR+ + E
Sbjct: 770 LKFTVQLLQQFNNSLTEEDAVKLATNLYNSTKG-------------VSKRI--RIEKNNG 814
Query: 698 CSAYNTSVDKIFDKPQWYGGTESAMFNRLEEIATSLQPVTPFLNCRLSRALEPVSEDDSK 757
N W GGTES +FN+LEE+A + P TP L ++ AL +
Sbjct: 815 VKRENI----------WAGGTESFVFNKLEEMAEAHYPRTPVLEAGITEALLSKNLPRRS 864
Query: 758 FIQTRINWVVQSGAVDFLHLMLVCMRWLVSR---DTRFVISIHDEIRYLVPDEEKYETAL 814
++ +RINW +QS VD+LHL+++ M +L+ R I++HDEIRYL P EE+Y TA
Sbjct: 865 YMTSRINWAIQSSGVDYLHLLIISMEYLLKYFGIHARLAITVHDEIRYLTPWEERYRTAF 924
Query: 815 ALHVTNLLTRAFCIKKLDMTDIPLSISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYG 874
AL + NL TRAF +L + ++P S++FFS V+ID+VLRK+ DC TPSNP
Sbjct: 925 ALQIANLWTRAFFSHRLGINELPQSVAFFSSVDIDEVLRKDVQMDCVTPSNP------IP 978
Query: 875 IPLGEILDIYQTIDKANGVIGTFK 898
IP GE L+I + K + +K
Sbjct: 979 IPPGEALNIDALLQKLSSEHAQYK 1002
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 76/196 (38%), Gaps = 41/196 (20%)
Query: 4 ESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLATF 63
+ W N + NSL EV K +C ++K R+ F +I + L+ YCA D T
Sbjct: 320 DPWLNHCATNSLKEVAKFHCNID-MNKAVRDEFATLDKAEILKDLQKLVLYCANDVDTTH 378
Query: 64 EVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLAG 123
+V +FP F+E PHPVT A ML L
Sbjct: 379 KVYAKVFPRFVEVCPHPVTFAAMLRL---------------------------------- 404
Query: 124 MLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHD--DKYKDSLW 181
+ +LPVN++W Y + F ++N + L+ A D KD W
Sbjct: 405 ----CSLFLPVNSSWPAYVENCERIFKEVNEHVWHHLLQLAQDALDTQKKDPDAVKDDPW 460
Query: 182 LWDQDWSVKDLKLKKK 197
L DWS +L K K
Sbjct: 461 LSQLDWSSCNLHRKVK 476
>gi|410079887|ref|XP_003957524.1| hypothetical protein KAFR_0E02360 [Kazachstania africana CBS 2517]
gi|372464110|emb|CCF58389.1| hypothetical protein KAFR_0E02360 [Kazachstania africana CBS 2517]
Length = 1187
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 197/462 (42%), Positives = 278/462 (60%), Gaps = 44/462 (9%)
Query: 431 FIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEISRMLSYWRNNHERVKK 490
K+PH DG LN LS+ +I+ F L A ++I+ SYW + ER+
Sbjct: 564 LFKIPHPDGPTLNCTTLLSKPYIHFFEKGILKSESKYAHEALQINSSGSYWMSARERIMS 623
Query: 491 QFVVWLNKKDLPRRLVENIESE------GRDYGVILPQLIVSGTLTRRAVEATWMTASNA 544
QF+V +K + + E +S G D G+ILP++I GT+TRRAVE TW+TASN
Sbjct: 624 QFLV--SKNEFSDQFKELFDSHTQGSKVGGDVGIILPRIIPMGTITRRAVENTWLTASNT 681
Query: 545 VGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQK 604
R+GSEL+ I+AP GY +GADVDS+ELWIAS++GDS HG T +GWM L G K
Sbjct: 682 KTNRIGSELKTQIKAPPGYCFVGADVDSEELWIASLVGDS-VFNIHGGTAIGWMCLEGTK 740
Query: 605 SNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKM 664
++ TD+H+ TAK +G +R AKI NY RIYGAG +FA +LLK+FNP +++ AK A ++
Sbjct: 741 NDGTDLHTKTAKILGCTRNEAKIFNYGRIYGAGVKFAGQLLKRFNPTLTEEVAKKTATRL 800
Query: 665 YTLTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQWYGGTESAMFN 724
Y TKGK T ++F+K WYGG+ES +FN
Sbjct: 801 YESTKGK-------------------------------TRRSRMFEK-FWYGGSESILFN 828
Query: 725 RLEEIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLVCMRW 784
RLE IA P TP L C ++ AL + + F+ +RINW +QS VD+LHL+ V M +
Sbjct: 829 RLENIAEQDIPRTPVLGCSITSALMKRNLKLNSFLPSRINWAIQSSGVDYLHLLCVSMNY 888
Query: 785 LVSR---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIPLSIS 841
L+++ D R ISIHDEIRYL ++++Y A+AL ++NL TRA +++ + D+P + +
Sbjct: 889 LIAKYSLDARLCISIHDEIRYLCSEKDRYRVAMALQISNLWTRAIFCEQVGIEDLPQNCA 948
Query: 842 FFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDI 883
FFS V+ID V+RKE + DC TPSNP + G + + E+L+I
Sbjct: 949 FFSQVDIDHVMRKEVNMDCITPSNPTAIPHGEAMDITELLNI 990
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 82/335 (24%), Positives = 128/335 (38%), Gaps = 109/335 (32%)
Query: 3 DESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLAT 62
++ W NVS+LNSL++V +C K +DK R+ F I N+ L++YCA D
Sbjct: 310 NDPWLNVSTLNSLADVADFHCNIK-MDKDPRSYFDSTDKSLIIENFEKLVSYCATDV--- 365
Query: 63 FEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLA 122
EV T +V +FP FLE+ PH V+
Sbjct: 366 -EV----------------------------------TSKVFDKVFPTFLEKCPHAVSFG 390
Query: 123 GMLELSTAYLPVNN-NWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDKYKDSLW 181
+ LS+ LP N+ +W Y + S +L KS + +K Q + KYKD
Sbjct: 391 ALKSLSSCILPTNHKDWNNYIDNS----ENLYQTSKSRIEEKIVQIINEFV--KYKD--- 441
Query: 182 LWDQDWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRRELVEKFK 241
E E Y+I ++ ++ ++ K K
Sbjct: 442 --------------------------YETNSEHYKIIQDDPWMSQLDWTK---------K 466
Query: 242 PLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIPGPS 301
P+ TKD +P+ L G+PEWYR L P + K +P +
Sbjct: 467 PIRMTKDGVPMKRQKLPGFPEWYRSLF--PSNDHK--------------------VPKIT 504
Query: 302 LISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVP 336
+ S ++ P L+W+ P+ + GW + VP
Sbjct: 505 IKSRNI---PIFFKLSWEGYPVKWTSTDGWCFPVP 536
>gi|398406849|ref|XP_003854890.1| hypothetical protein MYCGRDRAFT_68179 [Zymoseptoria tritici IPO323]
gi|339474774|gb|EGP89866.1| hypothetical protein MYCGRDRAFT_68179 [Zymoseptoria tritici IPO323]
Length = 1163
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 200/467 (42%), Positives = 279/467 (59%), Gaps = 48/467 (10%)
Query: 431 FIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEISRMLSYWRNNHERVKK 490
+ KLPHKDG + +PL++ ++ F + L A+ +E++ +YW +R++
Sbjct: 580 YFKLPHKDGPEVRCTSPLAKGYLQFFENGLLYSEYAYAREALEMNASCAYWVAARDRIRS 639
Query: 491 QFVVWLNKKDLPRRLVENIESEGRDYGVILPQLIVSGTLTRRAVEATWMTASNAVGERVG 550
Q VV+ N++ + + ++ + G ILPQ+I GT+TRRAVE TW+TA+NA RVG
Sbjct: 640 QMVVYANEES------DGVPNDEQKLGYILPQVIPMGTITRRAVENTWLTAANAKKNRVG 693
Query: 551 SELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDM 610
SEL++MI AP GYS +GADVDSQELWIAS++GD+ K HG +G+MTL G K+ TD+
Sbjct: 694 SELKSMITAPPGYSFVGADVDSQELWIASLVGDA-SFKLHGGNAIGFMTLEGTKAAGTDL 752
Query: 611 HSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKG 670
HS TAK +GISR AK+ NY RIYGAG +FA+ LL+QFNP + ++DAKS A +Y TKG
Sbjct: 753 HSRTAKILGISRNDAKVFNYGRIYGAGLKFAQSLLRQFNPTLKEADAKSIATTLYQETKG 812
Query: 671 KKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQWY-GGTESAMFNRLEEI 729
K S KI Q+ GGTES +FN+LE+
Sbjct: 813 TK-------------------------------SRGKILRDRQFLRGGTESLVFNKLEDF 841
Query: 730 ATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLVCMRWLVSR- 788
A +P TP L ++ AL F+ +RINW +QS VD+LHL++V M +L R
Sbjct: 842 AEQERPRTPVLGAAITEALMRRYISKGGFMTSRINWAIQSSGVDYLHLLIVSMEYLTRRY 901
Query: 789 --DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIPLSISFFSGV 846
R +++HDEIRYL DE+KY A+AL V N+ TRA +++ + D+P S ++FS V
Sbjct: 902 NIHARLALTVHDEIRYLSKDEDKYRCAMALQVANVWTRAMFSQQMGIDDLPQSCAYFSAV 961
Query: 847 EIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKANGV 893
+ID VLRKE D DC TPS+P IP GE +DI Q + K +
Sbjct: 962 DIDHVLRKEVDMDCVTPSHP------TAIPPGESIDIIQLLAKGDAA 1002
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 86/199 (43%), Gaps = 40/199 (20%)
Query: 3 DESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLAT 62
+E W SS+NSL +V K +C G +DK R F E + + L+ YCA D T
Sbjct: 323 EELWVGRSSVNSLRDVAKFHC-GITIDKARREWFGELDRDGVMERLDELLDYCAADVDIT 381
Query: 63 FEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLA 122
+V + +FPLF+E PHPV+ A + L
Sbjct: 382 HKVYKKVFPLFMETCPHPVSFAALRHL--------------------------------- 408
Query: 123 GMLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDK-YKDSLW 181
S+ LP++ W Y + T+ L+ ++ L+D ++A D + Y++ W
Sbjct: 409 -----SSEILPIDKGWEVYIRNAEATYQKLSTGVQERLIDLAEKALEHKADPEIYENDPW 463
Query: 182 LWDQDWSVKDLKLKKKANK 200
L DW+ +++++ K K
Sbjct: 464 LCQLDWTGQEVRMVKGKKK 482
>gi|294658573|ref|XP_460911.2| DEHA2F12628p [Debaryomyces hansenii CBS767]
gi|202953230|emb|CAG89264.2| DEHA2F12628p [Debaryomyces hansenii CBS767]
Length = 1342
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 195/464 (42%), Positives = 284/464 (61%), Gaps = 43/464 (9%)
Query: 431 FIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEISRMLSYWRNNHERVKK 490
K+PH +G + LS+ ++ F L A+ I+ ++ SYW N +R+
Sbjct: 591 LFKVPHPEGPGKRCTSILSKSYLRYFESGILTSEYSFAQEILSLNSTASYWMGNRQRIMD 650
Query: 491 QFVVWLNKKDLPRRLVEN-IESEG-RDYGVILPQLIVSGTLTRRAVEATWMTASNAVGER 548
QFV++ + + + ++S+ +D G+ILP+L GT+TRRA E TW+TASN+ R
Sbjct: 651 QFVIYSDANHKKNKFFDTKVDSKKHKDMGIILPKLCSMGTITRRATENTWLTASNSKKNR 710
Query: 549 VGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNAT 608
+GSEL+AMI+AP+GY+ +GADVDS+ELWIAS++GDS + HG+T LGWMTL G KS T
Sbjct: 711 IGSELKAMIEAPEGYTFVGADVDSEELWIASLVGDSMF-EMHGSTALGWMTLEGDKSEKT 769
Query: 609 DMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLT 668
D+HS TA+ +GISR AK+ NY RIYGAG +FA RLLKQ N +S +A+ A+ +Y T
Sbjct: 770 DLHSKTAEILGISRNDAKVFNYGRIYGAGVKFATRLLKQCNSSLSDVEAELMAKTLYAKT 829
Query: 669 KGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQWYGGTESAMFNRLEE 728
KG+ T+ K D+ ++GGTES MFN LE
Sbjct: 830 KGQ-------------------------------TNTSKFLDRRMYHGGTESIMFNMLES 858
Query: 729 IATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLVCMRWLVSR 788
IA P TP L ++ AL + + + ++ +RINWV+QS VD+LHL++V M +L+ +
Sbjct: 859 IAYQEDPKTPVLGAAITDALTIANLNKNNYLTSRINWVIQSSGVDYLHLLIVAMEFLLKK 918
Query: 789 ---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIPLSISFFSG 845
D R +I++HDE+RY+V E+KY+TAL L ++NL TRA ++L + ++P S +FFS
Sbjct: 919 FRIDGRLIITVHDELRYMVKSEDKYKTALLLQISNLWTRAMFCEQLGIKEVPQSCAFFSE 978
Query: 846 VEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDK 889
V+ID +LRKE DC TPS+ IP GE LDI++ ++K
Sbjct: 979 VDIDNILRKEVTLDCVTPSH------SNSIPPGESLDIHKILEK 1016
Score = 110 bits (276), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 94/363 (25%), Positives = 143/363 (39%), Gaps = 120/363 (33%)
Query: 1 MTDESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTL 60
+ D+ W N S NSL+ V +C K LDKTDR+ F +D+ NN++NLM YCAKD
Sbjct: 319 LLDDPWLNKGSPNSLANVADFHCNIK-LDKTDRDYFGTEDPQDVINNFNNLMDYCAKDVD 377
Query: 61 ATFEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVT 120
AT+ V LF F ++ PHPV+ A + L T LP T
Sbjct: 378 ATYSVTAKLFSQFRQKVPHPVSFAALRHLGTLMLPTT----------------------- 414
Query: 121 LAGMLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDKYKDSL 180
NW Y + + + E+ ++L ++ + + + D+ +SL
Sbjct: 415 ---------------KNWDNYIETAEEVYQKNREEVSTILKERANAFVNYI--DQNNESL 457
Query: 181 --------WLWDQDWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKR 232
WL +W++K +LK KNGE
Sbjct: 458 KPDWETDPWLSQLNWTIKVQRLK-----------------------KNGEPA-------- 486
Query: 233 RRELVEKFKPLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDT 292
N ++L GYPEWYR L + + V ++E+
Sbjct: 487 -------------------ANQAFLTGYPEWYRDLF---KTVTINGVKQREMN------- 517
Query: 293 SEAWIPGPSLISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTD-IKVPDAENIPL 351
IST ++TP LL L W+ PL + GW + VP++ + IK D ++ P
Sbjct: 518 ----------ISTRTRVTPLLLKLKWEGYPLLWTDSSGWCFKVPFNEETIKSMDDKSYPR 567
Query: 352 EQL 354
+L
Sbjct: 568 AKL 570
>gi|452845609|gb|EME47542.1| hypothetical protein DOTSEDRAFT_123455 [Dothistroma septosporum
NZE10]
Length = 1127
Score = 370 bits (951), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 201/466 (43%), Positives = 277/466 (59%), Gaps = 51/466 (10%)
Query: 431 FIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEISRMLSYWRNNHERVKK 490
+ KLPHKDG +PL++ ++ F +L+ AK +E++ SYW + +R+
Sbjct: 543 YFKLPHKDGPDARCASPLAKGYLKFFESGTLSSEYEYAKEALEMNASCSYWISARDRIMS 602
Query: 491 QFVVWLNKKDLPRRLVENIESEG--RDYGVILPQLIVSGTLTRRAVEATWMTASNAVGER 548
Q VV+ N E++++ G D G ILPQ+I GT+TRRAVE TW+TASNA R
Sbjct: 603 QMVVYEN---------ESLKAVGDHSDIGYILPQVIPMGTITRRAVENTWLTASNAKKNR 653
Query: 549 VGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNAT 608
VGSEL++MI AP GY +GADVDSQELWIAS++GD+ K HG +G+MTL G K T
Sbjct: 654 VGSELKSMITAPPGYCFVGADVDSQELWIASLVGDA-SFKLHGGNAIGFMTLEGTKGAGT 712
Query: 609 DMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLT 668
D+HS TAK + ISR AK+ NY RIYGAG +FA+ LL+QFNP + + DAK A +Y T
Sbjct: 713 DLHSRTAKILDISRNDAKVFNYGRIYGAGLKFAQSLLRQFNPTLKEEDAKMIATNLYQET 772
Query: 669 KGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQWYGGTESAMFNRLEE 728
KG +T+ + ++ W GGTES +FN+LEE
Sbjct: 773 KGT------------------------------STTKKLLHERKFWRGGTESFVFNKLEE 802
Query: 729 IATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLVCMRWLVSR 788
A +P TP L ++ AL F+ +RINW +QS VD+LHL++V M +L R
Sbjct: 803 FAEQERPRTPVLGAGITEALMRRYISKGGFMTSRINWAIQSSGVDYLHLLIVSMEYLCKR 862
Query: 789 ---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIPLSISFFSG 845
+ R +++HDEIRYL +E+KY +A+AL V N+ TRA +++ + D+P S ++FS
Sbjct: 863 YNINARLALTVHDEIRYLAKNEDKYRSAMALQVANVWTRAMFSQQMGIDDLPQSCAYFSA 922
Query: 846 VEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKAN 891
V+ID VLRKE D DC TPS+P IP GE LDI Q + K +
Sbjct: 923 VDIDHVLRKEVDMDCVTPSHP------KAIPPGESLDILQILAKGD 962
Score = 85.1 bits (209), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/334 (23%), Positives = 121/334 (36%), Gaps = 111/334 (33%)
Query: 3 DESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLAT 62
+E W SS+NSL +V K +C G +DK R F E + + L+ YCA D T
Sbjct: 286 EELWVGRSSVNSLRDVAKFHC-GITIDKARREWFGELDRDGVVERLDELLDYCAADVEIT 344
Query: 63 FEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLA 122
+V + +FPLFLE PHPV+ A
Sbjct: 345 HKVYKKVFPLFLETCPHPVSFA-------------------------------------- 366
Query: 123 GMLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACS-LLHDDKYKDSLW 181
+ +++ LPV+ +W Y + T+ L+ + L+D D+A + H + YK W
Sbjct: 367 ALRHMASEILPVDKSWEAYIANAEATYQKLSSGVTERLVDLADKALAHRTHPEVYKKDPW 426
Query: 182 LWDQDWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRRELVEKFK 241
L DWS +++++ K K G+ R + K
Sbjct: 427 LCQLDWSGQEVRMVKG--------------------KKKGDPP---------RPAARQKK 457
Query: 242 PLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIPGPS 301
P G P+WYR L + D D V
Sbjct: 458 P----------------GMPQWYRGLFAR---NDADLV---------------------- 476
Query: 302 LISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLV 335
++ +I P LL L W + PL + +GW + V
Sbjct: 477 -LTVRTRIAPILLRLAWDNNPLVWSNKYGWTFKV 509
>gi|367049728|ref|XP_003655243.1| hypothetical protein THITE_2118711 [Thielavia terrestris NRRL 8126]
gi|347002507|gb|AEO68907.1| hypothetical protein THITE_2118711 [Thielavia terrestris NRRL 8126]
Length = 1198
Score = 370 bits (950), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 199/474 (41%), Positives = 279/474 (58%), Gaps = 50/474 (10%)
Query: 431 FIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEISRMLSYWRNNHERVKK 490
+ KLPHKDG P+++ +++ F +L+ AK +E++ SYW + +R+
Sbjct: 584 YFKLPHKDGPTARCVTPMAKGYLSYFEKGTLSSEYPYAKEALEMNASCSYWISARDRIMS 643
Query: 491 QFVVWLNKKDLPRRLV--------ENIESEGRDYGVILPQLIVSGTLTRRAVEATWMTAS 542
Q VV+ + DLP E++ E G ILPQ+I GT+TRRAVE TW+TAS
Sbjct: 644 QLVVY--EDDLPSSATKAPSLSTGESVAEEPPVGGFILPQVIPMGTITRRAVENTWLTAS 701
Query: 543 NAVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSG 602
NA RVGSEL+AM++AP G+ +GADVDS+ELWIASV+GD+ + HG +G+MTL G
Sbjct: 702 NAKKNRVGSELKAMVRAPPGHVFVGADVDSEELWIASVVGDA-TFRIHGGNAIGFMTLEG 760
Query: 603 QKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKAR 662
K+ TD+HS TA +GI+R AK+ NY RIYGAG +FA +LL+QFNP +S+ + + A
Sbjct: 761 TKAAGTDLHSRTASILGITRNDAKVFNYGRIYGAGLKFAAQLLRQFNPSLSEKETLTIAS 820
Query: 663 KMYTLTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQWYGGTESAM 722
K+Y TKG K T+ ++ +P W GGTES +
Sbjct: 821 KLYATTKGTK------------------------------TNRKSLYKRPFWRGGTESFV 850
Query: 723 FNRLEEIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLVCM 782
FN+LEE A +P TP L ++ AL ++ +RINW +QS VD+LHL++V M
Sbjct: 851 FNKLEEFAEQERPRTPVLGAGITEALMGRFISKGGYLTSRINWAIQSSGVDYLHLLIVAM 910
Query: 783 RWLVSR---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIPLS 839
+L R R +++HDEIRYLV + +KY A+AL V NL TRA +++ + D+P S
Sbjct: 911 DYLARRYNIAARLALTVHDEIRYLVQEHDKYRAAMALQVANLWTRAMFAQQVGIHDLPQS 970
Query: 840 ISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKANGV 893
+FFS V+ID+VLRKE D DC TPSNP IP GE +DI + K +
Sbjct: 971 CAFFSAVDIDRVLRKEVDMDCVTPSNP------TPIPPGESIDIAALLAKGDAA 1018
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 84/351 (23%), Positives = 126/351 (35%), Gaps = 111/351 (31%)
Query: 3 DESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLAT 62
+E W SS+NSL +V K + + DK RN F E S E + L+TYCA D T
Sbjct: 327 EELWVERSSINSLRDVAKFHLNISI-DKELRNSFGELSREGVVEKLDELLTYCAADVAIT 385
Query: 63 FEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLA 122
V Q +FP FL PHPV+ A + L
Sbjct: 386 HRVYQIVFPNFLRVCPHPVSFAALRHL--------------------------------- 412
Query: 123 GMLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHD-DKYKDSLW 181
S+ LPV+ +W Y + T++ L+ ++ L+ ++A + D +K+ + W
Sbjct: 413 -----SSVILPVDKSWDSYLANAEATYHKLSDAVQDRLIALTEKALEIKDDREKWANDPW 467
Query: 182 LWDQDWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRRELVEKFK 241
+ DWS +++K+ K K G+ R + K
Sbjct: 468 MSQLDWSGQEIKMVKG--------------------KKKGDPP---------RPAARQKK 498
Query: 242 PLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIPGPS 301
P G P+WY+ L K S P
Sbjct: 499 P----------------GMPQWYKDLFAKNDS--------------------------PI 516
Query: 302 LISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTDIKVPDAENIPLE 352
IS +I P LL L W PL + HGW + VP K + + +P +
Sbjct: 517 NISVRTRIAPLLLRLAWDGHPLFWSDKHGWTFRVPRDQAAKYVERQMLPCD 567
>gi|167521656|ref|XP_001745166.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163776124|gb|EDQ89744.1| predicted protein [Monosiga brevicollis MX1]
Length = 882
Score = 370 bits (949), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 196/459 (42%), Positives = 273/459 (59%), Gaps = 50/459 (10%)
Query: 431 FIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEISRMLSYWRNNHERVKK 490
+ KLP+ G GNP +D++ + L D A+ ++ + SYW + R K
Sbjct: 453 YFKLPNSRGPDSTCGNPFGKDYLKFMKNGLLVSDDPQAREALDNTLACSYWVSVRVRANK 512
Query: 491 QFVVWLNKKDLPRRLVENIESEGRDY------GVILPQLIVSGTLTRRAVEATWMTASNA 544
Q VV ++++ R L N S + G I+P ++ GT+TRRAVE TWMTASN
Sbjct: 513 QLVVMDDRRERERFLTLNGRSTPKQLDSDEPIGAIIPMVLPFGTVTRRAVEKTWMTASNP 572
Query: 545 VGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQK 604
+R+GSEL+AMIQAP GY ++GADVDSQELWIASVIGD +EHGAT +GWMTL G K
Sbjct: 573 KPQRIGSELKAMIQAPPGYKLVGADVDSQELWIASVIGDQRLGREHGATAMGWMTLQGTK 632
Query: 605 SNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKM 664
++ TDMHS+TAK +GI+R+ AKI NY RIYGAG+ FA LL++FNP +++ +A++KA ++
Sbjct: 633 NDGTDMHSMTAKILGINRDEAKIFNYGRIYGAGKAFAASLLQKFNPTITEREAQAKAEEL 692
Query: 665 YTLTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQWYGGTESAMFN 724
Y TKGK++ + G+ + G+ES MF
Sbjct: 693 YLETKGKRIAGARGGYFD----------------------------------GSESHMFT 718
Query: 725 RLEEIATSLQPVTPFLNCRLSRALEP-------VSEDDSKFIQTRINWVVQSGAVDFLHL 777
LE+IAT+ P TP L +++ L P + S+++ +R+NWVVQS AVDFLHL
Sbjct: 719 SLEDIATAATPRTPVLGFQITDGLLPRNFMHRFLCVSMSQYMTSRVNWVVQSSAVDFLHL 778
Query: 778 MLVCMRWLV---SRDTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMT 834
M+ M + R I+IHDEIRY+V DE+ A ALH+TNL R+ +L M
Sbjct: 779 MITSMDHFIRTYGLRARLCITIHDEIRYIVADEDIARVAYALHLTNLYVRSMFAARLGMY 838
Query: 835 DIPLSISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGY 873
D+P S++FFS V++D V+RKE D C TPS+P + GY
Sbjct: 839 DLPQSVAFFSAVDVDTVMRKEVDLTCVTPSHPDVIPPGY 877
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 94/360 (26%), Positives = 131/360 (36%), Gaps = 128/360 (35%)
Query: 6 WTNVSSLNSLSEVY------KLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDT 59
W + SS SL +VY K + + K L K RNIF GSL+D+ + + + TYCA+D
Sbjct: 195 WVHESSPLSLVDVYRHTVDPKGHVDAKELSKETRNIF--GSLDDVRDAFQEVTTYCARDV 252
Query: 60 LATFEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPV 119
LAT + Q + P FL H TL GMLE+S Y
Sbjct: 253 LATLAIYQKILPKFLAHTGHLATLVGMLEMSKMY-------------------------- 286
Query: 120 TLAGMLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDD-KYKD 178
LPVN +W Y +ES + + + + L++ +QA L+ K+ +
Sbjct: 287 ------------LPVNASWQHYLDESERVYIEKMRLTRQHLVELAEQASQLVKSSGKWLE 334
Query: 179 SLWLWDQDWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRRELVE 238
WL DW T +P+++
Sbjct: 335 DPWLRHLDW--------------------TFQPQKY------------------------ 350
Query: 239 KFKPLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIP 298
TK LP L G P+WY K C + S DK +
Sbjct: 351 -------TKQGLPYKRQKLPGKPQWY-KACWE-GSNDKGGLE------------------ 383
Query: 299 GPSLISTSMQITPKLLSLTWK------SMPLHFIRGHGWGYLVPYSTDIKVPDAENIPLE 352
I+ +I P LL L W+ S PL+F H WGYLVP + D P E
Sbjct: 384 ----IAPGKRIAPLLLRLQWRDQALNESYPLYFHPVHKWGYLVPKGSHHAPSDKRYGPYE 439
>gi|241956434|ref|XP_002420937.1| DNA polymerase gamma subunit, putative; mitochondrial DNA polymerase
catalytic subunit, putative [Candida dubliniensis CD36]
gi|223644280|emb|CAX41091.1| DNA polymerase gamma subunit, putative [Candida dubliniensis CD36]
Length = 1329
Score = 369 bits (948), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 196/464 (42%), Positives = 277/464 (59%), Gaps = 45/464 (9%)
Query: 431 FIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEISRMLSYWRNNHERVKK 490
K+PH +G + LS+ ++ F D +L A +I+ ++ SYW N R+K
Sbjct: 610 LFKVPHPNGPSSRCTHILSKLYVRNFEDGTLTSEYDYATKILNLNNEASYWLGNRNRIKD 669
Query: 491 QFVVW--LNKKDLPRRLVENIESEGRDYGVILPQLIVSGTLTRRAVEATWMTASNAVGER 548
QFVV+ L K + E+ E G+I+P L GT+TRRA E TW+TASNA R
Sbjct: 670 QFVVYNQLGKNKFFDTIKES--KEHSSMGIIIPNLATMGTITRRATENTWLTASNAKKNR 727
Query: 549 VGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNAT 608
+GSEL+++I+AP GY +GADVDS+ELWIAS++GDS + HG T LGWMTL G+KS T
Sbjct: 728 IGSELKSLIEAPKGYCFVGADVDSEELWIASLVGDSML-QIHGGTALGWMTLEGEKSQKT 786
Query: 609 DMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLT 668
D+HS TA +GISR AK+ NY RIYGAG +FA RLLKQFN ++ +A AR++Y T
Sbjct: 787 DLHSKTASILGISRNDAKVFNYGRIYGAGVKFATRLLKQFNGNITDEEADKVARQLYDST 846
Query: 669 KGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQWYGGTESAMFNRLEE 728
KG+ T++ K +YGGTES MFN LE
Sbjct: 847 KGR-------------------------------TAMTKYLPSKIYYGGTESIMFNTLEA 875
Query: 729 IATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLVCMRWLVSR 788
IA +P TP L ++ AL + + ++++ +R+NW +QS VD+LHL+++ M +L+ +
Sbjct: 876 IAQQEEPKTPVLGASITDALNVKNLNTNQYMTSRVNWTIQSSGVDYLHLLIISMEYLIEK 935
Query: 789 ---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIPLSISFFSG 845
+ R I++HDE+RYLV + +KY+ AL L ++N+ TRA ++L + ++P S +FFS
Sbjct: 936 YGIEARLAITVHDELRYLVKETDKYKAALLLQISNIWTRAMFCEQLGIKEVPQSCAFFSE 995
Query: 846 VEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDK 889
V+ID VLRKE DC TPSNP IP GE L+I Q + K
Sbjct: 996 VDIDHVLRKEVSMDCITPSNP------TPIPFGESLNIGQLLLK 1033
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 100/238 (42%), Gaps = 44/238 (18%)
Query: 1 MTDESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTL 60
+ D+ W + + NSL+ V + +C LDKTDR+ F I +N+ LM YCAKD
Sbjct: 343 VADDPWLLMGAPNSLANVARFHCNIH-LDKTDRDYFATEDPNLIIDNFSKLMDYCAKDVD 401
Query: 61 ATFEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVT 120
ATFEV + LFP+F++R PHPV+ A + L T LP T
Sbjct: 402 ATFEVTKKLFPVFIQRVPHPVSFAALRHLGTLILPTT----------------------- 438
Query: 121 LAGMLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKC-DQACSLLHDDK---- 175
W KY + + + E+ S L D + H ++
Sbjct: 439 ---------------TKWPKYIDSAESLYESNRQEVTSTLQQLANDLVAHIKHKNRKKPN 483
Query: 176 YKDSLWLWDQDWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRR 233
Y+ WL +W +K+ +LKK T PE + E+ K + + + +K R
Sbjct: 484 YETDPWLSQLNWQLKEARLKKDGTPYKKSAYMTGYPEWYRELFKTSKGEEMNLTLKTR 541
>gi|453087012|gb|EMF15053.1| DNA polymerase gamma [Mycosphaerella populorum SO2202]
Length = 1180
Score = 368 bits (945), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 198/465 (42%), Positives = 277/465 (59%), Gaps = 49/465 (10%)
Query: 431 FIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEISRMLSYWRNNHERVKK 490
+ KLPHKDG +PL++ ++ F + +L+ AK +E++ SYW + +R+
Sbjct: 577 YFKLPHKDGPDARCTSPLAKGYLQYFENGTLSSEYAYAKEALEMNASCSYWISARDRIMS 636
Query: 491 QFVVWLNKK-DLPRRLVENIESEGRDYGVILPQLIVSGTLTRRAVEATWMTASNAVGERV 549
Q VV+ +++ D P ++ D G ILPQ+I GT+TRRAVE TW+TA+NA RV
Sbjct: 637 QMVVYDSERADAP--------AQDTDLGYILPQVIPMGTITRRAVENTWLTAANAKKNRV 688
Query: 550 GSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATD 609
GSEL++++ AP GY+ +GADVDSQELWIAS++GDS K HG +G+MTL G K+ TD
Sbjct: 689 GSELKSIVTAPPGYAFVGADVDSQELWIASLVGDS-SFKIHGGNAIGFMTLEGTKAAGTD 747
Query: 610 MHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTK 669
+HS TAK +GISR AK+ NY RIYGAG +FA+ LL+QFNP +++ AK A +Y TK
Sbjct: 748 LHSRTAKILGISRNDAKVFNYGRIYGAGLKFAQSLLRQFNPSVTEEQAKMTATNLYHETK 807
Query: 670 GKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQWYGGTESAMFNRLEEI 729
G K + I ++ W GGTES +FN+LE+
Sbjct: 808 GSK------------------------------SGSKAIRERKFWRGGTESLVFNKLEDF 837
Query: 730 ATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLVCMRWLVSR- 788
A +P TP L ++ AL F+ +RINW +QS VD+LHL++V M +L R
Sbjct: 838 AEQERPRTPVLGAGITEALMRRFISKGGFMTSRINWAIQSSGVDYLHLLIVSMEYLCKRY 897
Query: 789 --DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIPLSISFFSGV 846
D R +++HDEIRYL E+KY TA+AL V N+ TRA +++ + D+P S ++FS V
Sbjct: 898 NIDARLALTVHDEIRYLSKAEDKYRTAMALQVANVWTRAMFSQQMGIDDLPQSCAYFSAV 957
Query: 847 EIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKAN 891
+ID VLRKE D DC TPS+P + GE LDI Q + K
Sbjct: 958 DIDHVLRKEVDMDCITPSHPNKIAP------GESLDIVQLLAKGT 996
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 83/199 (41%), Gaps = 40/199 (20%)
Query: 3 DESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLAT 62
+E W +S+NSL +V K +C +DK R F E E I L+ YCA D T
Sbjct: 320 EELWVGRASVNSLRDVAKFHCN-ITIDKARREWFGELDREGIVERLDELLDYCAADVDIT 378
Query: 63 FEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLA 122
+V + + PLFLE PHPV+ A + LS
Sbjct: 379 HKVYKKVLPLFLETSPHPVSFAALRHLS-------------------------------- 406
Query: 123 GMLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDKY-KDSLW 181
T LPVN +W Y + T++ L+ ++ L+D ++A + K + W
Sbjct: 407 ------TEILPVNRSWQSYIANAEATYHRLSSGVQERLIDLTERAVEHRGEPKVIRHDPW 460
Query: 182 LWDQDWSVKDLKLKKKANK 200
L DW +++++ K K
Sbjct: 461 LSQLDWGGQEVRMVKGKKK 479
>gi|320162698|gb|EFW39597.1| DNA polymerase gamma [Capsaspora owczarzaki ATCC 30864]
Length = 1596
Score = 367 bits (942), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 200/496 (40%), Positives = 284/496 (57%), Gaps = 72/496 (14%)
Query: 431 FIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEISRMLSYWRNNHERVKK 490
F ++PHK GE + G+PL++D++ L A + + ++ M +YW + RVK
Sbjct: 794 FYRIPHKGGETVRCGSPLAKDYLKALEKGVLTSQSETASKALALNTMCAYWVGVNRRVKS 853
Query: 491 QFVVW----------------------------LNKKDLPRRLVENIESEG----RDYGV 518
QF + ++ PR + + + +D+G
Sbjct: 854 QFSILQDMLAASGNAFPVDPSTVPSDCLLPPSTISMGTEPRPPSSHGQDQASQLRQDFGA 913
Query: 519 ILPQLIVSGTLTRRAVEATWMTASNAVGERVGSELRAMIQAPDGYSIIGADVDSQELWIA 578
I+PQ++ +GT+TRRAVE TWMTASNA R+GSEL+ + AP GY ++GADVDS+ELWIA
Sbjct: 914 IVPQVVSAGTITRRAVEPTWMTASNAKKNRLGSELKIKVVAPQGYQLVGADVDSEELWIA 973
Query: 579 SVIGDSYCAKEHGATPLGWMTLSGQKSNATDMHSITAKAVGISREHAKIINYARIYGAGE 638
++ GD+ HGAT LGWMTL+G+KS+ TDMHS TA + R+HAKI NYARIYGAG
Sbjct: 974 ALFGDARFGL-HGATALGWMTLAGKKSDGTDMHSKTAATLKTDRDHAKIFNYARIYGAGM 1032
Query: 639 RFAERLLKQFNPEMSKSDAKSKARKMYTLTKGKKLYRLKDGHLEELIKRVYSKYEAREVC 698
+A++LLKQF+ +S+ +A ++ +Y TKG+ +DG R S+
Sbjct: 1033 SYAQKLLKQFDASLSQEEADKRSSDLYASTKGR-----RDGQ-----SRSPSQPTG---- 1078
Query: 699 SAYNTSVDKIFDKPQWYGGTESAMFNRLEEIATSLQPVTPFLNCRLSRALEPVSEDDSKF 758
+W GG+ES FN+LE+IAT P TP L C + AL P + +F
Sbjct: 1079 --------------EWRGGSESYTFNKLEQIATK-NPRTPALGCEICNALHP-NVIKGEF 1122
Query: 759 IQTRINWVVQSGAVDFLHLMLVCMRWLVSR---DTRFVISIHDEIRYLVPDEEKYETALA 815
TR+NW VQS VD+LHL+L ++WLV R D R I+IHDE+R+LV + + ALA
Sbjct: 1123 ATTRVNWAVQSSGVDYLHLLLTSVKWLVQRYKIDARLCITIHDEVRFLVRETDTLRLALA 1182
Query: 816 LHVTNLLTRAFCIKKLDMTDIPLSISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGI 875
+ V NL TRA ++ + D+PLS++FFSGV++D VLRKES+ C TPS P L
Sbjct: 1183 MQVANLWTRALFSAQVGVYDLPLSVAFFSGVDVDHVLRKESNQICVTPSQPVPLA----- 1237
Query: 876 PLGEILDIYQTIDKAN 891
LG LDI Q + + +
Sbjct: 1238 -LGRTLDIQQLLSETD 1252
Score = 112 bits (281), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 132/324 (40%), Gaps = 98/324 (30%)
Query: 13 NSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLATFEVIQALFPL 72
SL ++ + Y G+ + K R+IFV GSL+D+ +N+ LM YCA D +T+ + L P
Sbjct: 425 GSLKDLCQFYL-GEEVSKDARDIFVNGSLQDVADNFELLMAYCANDVRSTYRLYAKLLPA 483
Query: 73 FLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLAGMLELSTAYL 132
++ + P+PV+ AGMLE+ + YLP + I ++ E +G++ LS +
Sbjct: 484 YMHKCPNPVSFAGMLEMGSCYLPIDATWYNFIAQGQAMYSES-------SGLVNLSLQQM 536
Query: 133 PVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDKYKDSLWLWDQDWSVKDL 192
++L + + D A KY+ WL + DW +
Sbjct: 537 ----------------------ATEALALAQVDPATG---RPKYESDPWLRNLDWHAEPQ 571
Query: 193 KLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRRELVEKFKPLMQTKDRLPV 252
++ K+ NK GE T+ PV
Sbjct: 572 RMTKEKR------------------NKKGE----------------------ITEPSRPV 591
Query: 253 NSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIPGPSLISTSMQITPK 312
+ L G PEWY+ LC P +D+ P +++ +TP
Sbjct: 592 SKQRLAGMPEWYKALC--PTGSDR-----------------------PEKLTSRTMVTPY 626
Query: 313 LLSLTWKSMPLHFIRGHGWGYLVP 336
LL L W P+ FI+G GWG+++P
Sbjct: 627 LLRLAWLGHPVRFIKGEGWGFVLP 650
>gi|367017918|ref|XP_003683457.1| hypothetical protein TDEL_0H03870 [Torulaspora delbrueckii]
gi|359751121|emb|CCE94246.1| hypothetical protein TDEL_0H03870 [Torulaspora delbrueckii]
Length = 1311
Score = 367 bits (942), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 200/461 (43%), Positives = 275/461 (59%), Gaps = 43/461 (9%)
Query: 431 FIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEISRMLSYWRNNHERVKK 490
K+PH +G N LS+ +I+ F L A ++I+ SYW + ER+
Sbjct: 571 LFKIPHPNGPENNCTTLLSKPYIHFFEKGILTSESEFAHDALKINSCGSYWMSARERILS 630
Query: 491 QFVVWLNKKDLP---RRLVENIES--EGRDYGVILPQLIVSGTLTRRAVEATWMTASNAV 545
QFVV + P + L + E + D G+ILP +I GT+TRRAVE TW+TASNA
Sbjct: 631 QFVV--PQSSFPNAFKPLKDGKEKFEDHEDLGIILPTVIPMGTVTRRAVENTWLTASNAK 688
Query: 546 GERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKS 605
R+GSEL+A I+AP GY +GADVDS+ELWIAS++ DS HG T +GWM L G K+
Sbjct: 689 SNRIGSELKAQIEAPKGYCFVGADVDSEELWIASLVSDS-VFNIHGGTAIGWMCLEGSKN 747
Query: 606 NATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMY 665
TD+H+ TA+ +G SR AKI NY RIYGAG +FA +LLK+FNP + +AKS A K+Y
Sbjct: 748 EGTDLHTKTAQILGCSRSEAKIFNYGRIYGAGVKFAAQLLKKFNPSLPDEEAKSIANKLY 807
Query: 666 TLTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQWYGGTESAMFNR 725
TKGK T KIF K WYGG+ES +FN+
Sbjct: 808 ESTKGK-------------------------------TKTSKIFKK-FWYGGSESILFNK 835
Query: 726 LEEIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLVCMRWL 785
LE IA +P TP L C ++ +L + S F+ +RINW +QS VD+LHL+ M +L
Sbjct: 836 LESIAEQDEPKTPVLGCGITFSLMKKNLGTSSFLPSRINWAIQSSGVDYLHLLSCSMHYL 895
Query: 786 VSR---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIPLSISF 842
+S+ + R ISIHDEIR+LV +E+KY A+AL V+N+ TRA +++ + D+P + +F
Sbjct: 896 ISKYNINARLSISIHDEIRFLVAEEDKYRAAMALQVSNIWTRAIFCEQMGIDDLPQNCAF 955
Query: 843 FSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDI 883
FS V+ID V+RKE D DC TPSNP + G I + ++L++
Sbjct: 956 FSLVDIDHVMRKEVDMDCVTPSNPVPIPHGETIDMRKLLEV 996
Score = 86.7 bits (213), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 88/202 (43%), Gaps = 42/202 (20%)
Query: 1 MTDESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTL 60
+ ++ W N+S++NSL +V L+C G ++K R F DI NN+ L YCA D
Sbjct: 306 LEEDPWLNLSAMNSLHDVAFLHC-GIRMNKEPREFFSTTDKNDIINNFQQLTNYCATDVE 364
Query: 61 ATFEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVT 120
T +V +FPLFLE+ PHPV+ + LS+ LP
Sbjct: 365 VTSKVFDKVFPLFLEKCPHPVSFGALRSLSSCILPTR----------------------- 401
Query: 121 LAGMLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDKYKDSL 180
+N W Y S + + + +++ ++ D + +++ +++
Sbjct: 402 --------------HNKWDTYLKSSEKVYQESKQDIEKKIIKIVDNTLKSIKSERFMETI 447
Query: 181 ----WLWDQDWSVKDLKLKKKA 198
WL DW++K LKL KK
Sbjct: 448 NNDPWLRQLDWTIKPLKLTKKG 469
>gi|63054429|ref|NP_588025.2| mitochondrial DNA polymerase [Schizosaccharomyces pombe 972h-]
gi|20141418|sp|Q12704.2|DPOG_SCHPO RecName: Full=DNA polymerase gamma; AltName: Full=Mitochondrial DNA
polymerase catalytic subunit
gi|157310502|emb|CAB76231.2| mitochondrial DNA polymerase [Schizosaccharomyces pombe]
Length = 1018
Score = 367 bits (941), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 198/465 (42%), Positives = 279/465 (60%), Gaps = 46/465 (9%)
Query: 431 FIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEISRMLSYWRNNHERVKK 490
F K+PHKDG G+PLS+ + F + L AK+ +E+S SYW + +R++
Sbjct: 549 FFKVPHKDGPEARCGSPLSKSYQRYFEEGILQSDYEVAKKALEMSASCSYWSSARDRIRS 608
Query: 491 QFVVWLNKKDLPRRLVENIESEGRDYGVILPQLIVSGTLTRRAVEATWMTASNAVGERVG 550
Q VVW +L + S +G+ILP +I GT+TRRAVE TW+TASN+ R+G
Sbjct: 609 QMVVWDKDAEL------GVPSSVDGFGIILPCIIPMGTVTRRAVENTWLTASNSKKNRLG 662
Query: 551 SELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDM 610
SEL+AMI+APDGY+ +GADVDS+ELWI +++GDS + HGAT LG MTL G+KS TD+
Sbjct: 663 SELKAMIRAPDGYTFVGADVDSEELWIVALMGDSQF-RLHGATALGMMTLEGKKSEGTDL 721
Query: 611 HSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKG 670
HS TA +G+SR+ AK+ NY R+YGAG + LL Q NP + ++AK A+K+Y TKG
Sbjct: 722 HSKTAAILGVSRDSAKVFNYGRLYGAGLKHTTLLLMQMNPTLKTAEAKELAKKLYASTKG 781
Query: 671 ---KKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQWYGGTESAMFNRLE 727
K RL++ L +L W GTES +FN+LE
Sbjct: 782 VKSKMSKRLQEMGLPKLTF---------------------------WSQGTESFVFNKLE 814
Query: 728 EIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLVCMRWLVS 787
+A P TP L+ +++AL + + F+ +R+NW +QS AVD+LHL+LV M L+
Sbjct: 815 AMAQLPSPRTPVLDAGITQALSSKNLSKNSFMTSRVNWAIQSSAVDYLHLLLVSMNHLIK 874
Query: 788 R---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIPLSISFFS 844
+ + R +++HDE+RYL D++KY A AL V NL TRAF ++L + ++P S++FFS
Sbjct: 875 KYYLEARLSLTVHDEVRYLSSDKDKYRVAFALQVANLWTRAFFCQRLGINELPQSVAFFS 934
Query: 845 GVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDK 889
V+ID VLRK+ DC TPSN IP GE L I ++K
Sbjct: 935 SVDIDHVLRKDVKMDCVTPSN------KVPIPPGEELTIESVLEK 973
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 91/207 (43%), Gaps = 43/207 (20%)
Query: 1 MTDESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTL 60
+ E W SS+NSL +V K +C LDK+ R+ F E I + L+TYCA DT
Sbjct: 299 LKQEPWLAHSSVNSLKDVAKFHC-NITLDKSKRDDFASLEKEPILQKLNELITYCAHDTY 357
Query: 61 ATFEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVT 120
+T +V + +FP FLE PHP T + ML L +
Sbjct: 358 STHQVFKKVFPQFLEVCPHPATFSAMLSLGS----------------------------- 388
Query: 121 LAGMLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLH--DDKYKD 178
+LPVN++W +Y N + + + + L ++A L++ D KD
Sbjct: 389 ---------VFLPVNHSWTRYINGVEEQYQQMIQLVDQKLSQYAEKAKDLINTKDTVLKD 439
Query: 179 SLWLWDQDWSVKDLKLK-KKANKTLSV 204
WL DW+ +L K KKA + + V
Sbjct: 440 P-WLRQLDWTPCNLYRKLKKATQEVPV 465
>gi|149236109|ref|XP_001523932.1| DNA polymerase gamma [Lodderomyces elongisporus NRRL YB-4239]
gi|146452308|gb|EDK46564.1| DNA polymerase gamma [Lodderomyces elongisporus NRRL YB-4239]
Length = 975
Score = 365 bits (937), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 201/501 (40%), Positives = 293/501 (58%), Gaps = 39/501 (7%)
Query: 391 CSKSAKRLEVIANVLDKKKLAEASSTDT--STDDADTPREIGFI--KLPHKDGEHLNVGN 446
C K E++A + +K + + D ST DA P ++ K+PH DG L +
Sbjct: 454 CFKVPYSEELVAELKEKNYVQVRLTGDEIESTYDALNPAGQSYVLFKVPHPDGPTLRCTS 513
Query: 447 PLSRDFINKFSDNSLAGVDIGAKRIIEISRMLSYWRNNHERVKKQFVVWLNKKDLPRRLV 506
LS+ F+ F + L A +I++++ SYW N +R+ QFVV+ + + R
Sbjct: 514 VLSKRFLRFFDEGVLTSQYDYAAKILKLNNEASYWMGNRQRISDQFVVFNDDERKARFFK 573
Query: 507 ENIE-SEGRDYGVILPQLIVSGTLTRRAVEATWMTASNAVGERVGSELRAMIQAPDGYSI 565
E +E D G+ILP+L GT+TRRA E TW+TASNA ++GSEL+ +I+AP GY
Sbjct: 574 TKKENAEHLDMGIILPRLASMGTITRRATENTWLTASNAKKNKIGSELKTLIEAPKGYCF 633
Query: 566 IGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMHSITAKAVGISREHA 625
+GADVDS+ELWIAS++GDS HG + LGWMTL G+KS TD+HS TA +GISR A
Sbjct: 634 VGADVDSEELWIASLVGDSIFGL-HGGSALGWMTLEGEKSQKTDLHSKTASILGISRNDA 692
Query: 626 KIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKGKKLYRLKDGHLEELI 685
K+ NY RIYGAG +FA LLKQFNP +S+ +A+ A+K+Y TKGK
Sbjct: 693 KVFNYGRIYGAGLKFATTLLKQFNPSLSEKEAEDTAKKLYASTKGK-------------- 738
Query: 686 KRVYSKYEAREVCSAYNTSVDKIFDKPQWYGGTESAMFNRLEEIATSLQPVTPFLNCRLS 745
+ + + +K + GG+ES MFN LE IA +P TP L +++
Sbjct: 739 -----------IRGSKSVKSNKFYS-----GGSESVMFNALEAIAQQPKPRTPVLGAQIT 782
Query: 746 RALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLVCMRWLVSR---DTRFVISIHDEIRY 802
AL + + + ++ +R+NW +QS VD+LHL++V M +L+ R D R I++HDE+RY
Sbjct: 783 EALTKRNLNKNTYMTSRVNWTIQSSGVDYLHLLIVSMDYLIERYGIDARLAITVHDELRY 842
Query: 803 LVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIPLSISFFSGVEIDKVLRKESDNDCKT 862
LV +E+KY +L L V+N+ TR K+ + ++P S +FFS VE+D VLRK+ + C T
Sbjct: 843 LVKEEDKYMASLLLQVSNVWTRGMFAYKMGLYELPQSCAFFSEVEVDHVLRKDPKDACIT 902
Query: 863 PSNPYGLCKGYGIPLGEILDI 883
PS P + G + E+L +
Sbjct: 903 PSQPKPIPPGELTTITELLKL 923
Score = 99.8 bits (247), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 94/347 (27%), Positives = 129/347 (37%), Gaps = 124/347 (35%)
Query: 3 DESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLAT 62
++ W + NSL+ V K +C + K DR +F + + +N++ LM YCA D AT
Sbjct: 233 EDPWLLRGTPNSLANVAKFHCNID-MQKEDRELFSSEDPQVVVDNFNMLMNYCAHDVEAT 291
Query: 63 FEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLA 122
F+V Q LF FLE+ PHPV+ A
Sbjct: 292 --------------------------------------FKVTQKLFDEFLEKVPHPVSFA 313
Query: 123 GMLELSTAYLPVNNNWVKYFN--ESCQTFNDLNVE--MKSLLMD---KCDQACSLLHDDK 175
+ L LP WVKY ESC + N V+ +K L D Q L D
Sbjct: 314 ALKHLGNLILPTTKKWVKYIESAESCYSANRDEVQNTLKKLAEDLVVYIKQNKPDLEPDH 373
Query: 176 YKDSLWLWDQDWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRRE 235
D WL DW++K +LK
Sbjct: 374 ANDP-WLSQLDWTLKKARLK---------------------------------------- 392
Query: 236 LVEKFKPLMQTKDRLPV-NSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSE 294
KD PV N++YL GYPEWYR+L + SK E+
Sbjct: 393 -----------KDGTPVKNNAYLTGYPEWYRELF--------KSSSKTEMN--------- 424
Query: 295 AWIPGPSLISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTDI 341
IS +ITP LL L W+ PL +++ GW + VPYS ++
Sbjct: 425 --------ISLRTRITPLLLRLKWEGYPLFWVKSQGWCFKVPYSEEL 463
>gi|256272554|gb|EEU07533.1| Mip1p [Saccharomyces cerevisiae JAY291]
Length = 1254
Score = 364 bits (934), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 194/473 (41%), Positives = 279/473 (58%), Gaps = 48/473 (10%)
Query: 431 FIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEISRMLSYWRNNHERVKK 490
K+PH +G N N L++ + + F L A + ++I+ SYW + ER++
Sbjct: 551 LFKVPHPNGPTFNCTNLLTKSYNHFFEKGVLKSESELAHQALQINSSGSYWMSARERIQS 610
Query: 491 QFVVWLNK-----KDLPRRLVENIESEGRDYGVILPQLIVSGTLTRRAVEATWMTASNAV 545
QFVV K + L + N E + D +I+P+++ GT+TRRAVE TW+TASNA
Sbjct: 611 QFVVPSCKFPNEFQSLSAKSSLNNE-KTNDLAIIIPKIVPMGTITRRAVENTWLTASNAK 669
Query: 546 GERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKS 605
R+GSEL+ ++AP GY +GADVDS+ELWIAS++GDS HG T +GWM L G K+
Sbjct: 670 ANRIGSELKTQVKAPPGYCFVGADVDSEELWIASLVGDS-IFNVHGGTAIGWMCLEGTKN 728
Query: 606 NATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMY 665
TD+H+ TA+ +G SR AKI NY RIYGAG +FA +LLK+FNP ++ + K A K+Y
Sbjct: 729 EGTDLHTKTAQILGCSRNEAKIFNYGRIYGAGAKFASQLLKRFNPSLTDEETKKIANKLY 788
Query: 666 TLTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQWYGGTESAMFNR 725
TKGK T K+F K WYGG+ES +FN+
Sbjct: 789 ENTKGK-------------------------------TKRSKLFKK-FWYGGSESILFNK 816
Query: 726 LEEIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLVCMRWL 785
LE IA P TP L C ++ +L + + F+ +RINW +QS VD+LHL+ M ++
Sbjct: 817 LESIAEQETPKTPVLGCGITYSLMKKNLRANSFLPSRINWAIQSSGVDYLHLLCCSMEYI 876
Query: 786 VSR---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIPLSISF 842
+ + + R ISIHDEIR+LV +++KY A+AL ++N+ TRA +++ + ++P + +F
Sbjct: 877 IKKYNLEARLCISIHDEIRFLVSEKDKYRAAMALQISNIWTRAMFCQQMGINELPQNCAF 936
Query: 843 FSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKANGVIG 895
FS V+ID V+RKE + DC TPSN IP GE LDI Q +DK+N +G
Sbjct: 937 FSQVDIDSVIRKEVNMDCITPSN------KTAIPHGEALDIIQLLDKSNSKLG 983
Score = 107 bits (267), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 88/337 (26%), Positives = 128/337 (37%), Gaps = 117/337 (34%)
Query: 3 DESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLAT 62
D+ W NVS+LNSL +V K +C+ LDKTDR+ F I N+ L+ YCA D AT
Sbjct: 293 DDPWLNVSALNSLKDVAKFHCKID-LDKTDRDFFASTDKSTIIENFQKLVNYCATDVTAT 351
Query: 63 FEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLA 122
+V +FP+FL++ PHPV+ AG+ LS LP L
Sbjct: 352 SQVFDKIFPVFLKKCPHPVSFAGLKSLSKCILPTKL------------------------ 387
Query: 123 GMLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHD--DKYKDSL 180
N+W Y N S + V+++S ++ + + LL D D Y
Sbjct: 388 -------------NDWNDYLNSSESLYQQSKVQIESKIV-QIIKDIVLLKDKPDFYLKDP 433
Query: 181 WLWDQDWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRRELVEKF 240
WL DW+ K L+L KK
Sbjct: 434 WLSQLDWTTKPLRLTKKG------------------------------------------ 451
Query: 241 KPLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIPGP 300
+P L G+PEWYR+L KD V +
Sbjct: 452 ---------VPAKCQKLPGFPEWYRQLF-----PSKDTVEPK------------------ 479
Query: 301 SLISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPY 337
I+ +I P L L+W++ P+ + + GW + VP+
Sbjct: 480 --ITIKSRIIPILFKLSWENSPVIWSKESGWCFNVPH 514
>gi|259149807|emb|CAY86611.1| Mip1p [Saccharomyces cerevisiae EC1118]
Length = 1280
Score = 364 bits (934), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 194/473 (41%), Positives = 279/473 (58%), Gaps = 48/473 (10%)
Query: 431 FIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEISRMLSYWRNNHERVKK 490
K+PH +G N N L++ + + F L A + ++I+ SYW + ER++
Sbjct: 577 LFKVPHPNGPTFNCTNLLTKSYNHFFEKGVLKSESELAHQALQINSSGSYWMSARERIQS 636
Query: 491 QFVVWLNK-----KDLPRRLVENIESEGRDYGVILPQLIVSGTLTRRAVEATWMTASNAV 545
QFVV K + L + N E + D +I+P+++ GT+TRRAVE TW+TASNA
Sbjct: 637 QFVVPSCKFPNEFQSLSAKSSLNNE-KTNDLAIIIPKIVPMGTITRRAVENTWLTASNAK 695
Query: 546 GERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKS 605
R+GSEL+ ++AP GY +GADVDS+ELWIAS++GDS HG T +GWM L G K+
Sbjct: 696 ANRIGSELKTQVKAPPGYCFVGADVDSEELWIASLVGDS-IFNVHGGTAIGWMCLEGTKN 754
Query: 606 NATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMY 665
TD+H+ TA+ +G SR AKI NY RIYGAG +FA +LLK+FNP ++ + K A K+Y
Sbjct: 755 EGTDLHTKTAQILGCSRNEAKIFNYGRIYGAGTKFASQLLKRFNPSLTDEETKKIANKLY 814
Query: 666 TLTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQWYGGTESAMFNR 725
TKGK T K+F K WYGG+ES +FN+
Sbjct: 815 ENTKGK-------------------------------TKRSKLFKK-FWYGGSESILFNK 842
Query: 726 LEEIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLVCMRWL 785
LE IA P TP L C ++ +L + + F+ +RINW +QS VD+LHL+ M ++
Sbjct: 843 LESIAEQETPKTPVLGCGITYSLMKKNLRANSFLPSRINWAIQSSGVDYLHLLCCSMEYI 902
Query: 786 VSR---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIPLSISF 842
+ + + R ISIHDEIR+LV +++KY A+AL ++N+ TRA +++ + ++P + +F
Sbjct: 903 IKKYNLEARLCISIHDEIRFLVSEKDKYRAAMALQISNIWTRAMFCQQMGINELPQNCAF 962
Query: 843 FSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKANGVIG 895
FS V+ID V+RKE + DC TPSN IP GE LDI Q +DK+N +G
Sbjct: 963 FSQVDIDSVIRKEVNMDCITPSN------KTAIPHGEALDINQLLDKSNSKLG 1009
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/337 (26%), Positives = 128/337 (37%), Gaps = 117/337 (34%)
Query: 3 DESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLAT 62
D+ W NVS+LNSL +V K +C+ LDKTDR+ F I N+ L+ YCA D AT
Sbjct: 319 DDPWLNVSALNSLKDVAKFHCKID-LDKTDRDFFASTDKSTIIENFQKLVNYCATDVTAT 377
Query: 63 FEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLA 122
+V +FP+FL++ PHPV+ AG+ LS LP L
Sbjct: 378 SQVFDKIFPVFLKKCPHPVSFAGLKSLSKCILPTKL------------------------ 413
Query: 123 GMLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHD--DKYKDSL 180
N+W Y N S + V+++S ++ + + LL D D Y
Sbjct: 414 -------------NDWNDYLNSSESLYQQSKVQIESKIV-QIIKDIVLLKDKPDFYLKDP 459
Query: 181 WLWDQDWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRRELVEKF 240
WL DW+ K L+L KK
Sbjct: 460 WLSQLDWTTKPLRLTKKG------------------------------------------ 477
Query: 241 KPLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIPGP 300
+P L G+PEWYR+L KD V +
Sbjct: 478 ---------VPAKCQKLPGFPEWYRQLF-----PSKDTVEPK------------------ 505
Query: 301 SLISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPY 337
I+ +I P L L+W++ P+ + + GW + VP+
Sbjct: 506 --ITIKSRIIPILFKLSWENSPVIWSKESGWCFNVPH 540
>gi|151945409|gb|EDN63652.1| mitochondrial DNA polymerase catalytic subunit [Saccharomyces
cerevisiae YJM789]
gi|207340866|gb|EDZ69085.1| YOR330Cp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 1280
Score = 364 bits (934), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 194/473 (41%), Positives = 279/473 (58%), Gaps = 48/473 (10%)
Query: 431 FIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEISRMLSYWRNNHERVKK 490
K+PH +G N N L++ + + F L A + ++I+ SYW + ER++
Sbjct: 577 LFKVPHPNGPTFNCTNLLTKSYNHFFEKGVLKSESELAHQALQINSSGSYWMSARERIQS 636
Query: 491 QFVVWLNK-----KDLPRRLVENIESEGRDYGVILPQLIVSGTLTRRAVEATWMTASNAV 545
QFVV K + L + N E + D +I+P+++ GT+TRRAVE TW+TASNA
Sbjct: 637 QFVVPSCKFPNEFQSLSAKSSLNNE-KTNDLAIIIPKIVPMGTITRRAVENTWLTASNAK 695
Query: 546 GERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKS 605
R+GSEL+ ++AP GY +GADVDS+ELWIAS++GDS HG T +GWM L G K+
Sbjct: 696 ANRIGSELKTQVKAPPGYCFVGADVDSEELWIASLVGDS-IFNVHGGTAIGWMCLEGTKN 754
Query: 606 NATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMY 665
TD+H+ TA+ +G SR AKI NY RIYGAG +FA +LLK+FNP ++ + K A K+Y
Sbjct: 755 EGTDLHTKTAQILGCSRNEAKIFNYGRIYGAGAKFASQLLKRFNPSLTDEETKKIANKLY 814
Query: 666 TLTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQWYGGTESAMFNR 725
TKGK T K+F K WYGG+ES +FN+
Sbjct: 815 ENTKGK-------------------------------TKRSKLFKK-FWYGGSESILFNK 842
Query: 726 LEEIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLVCMRWL 785
LE IA P TP L C ++ +L + + F+ +RINW +QS VD+LHL+ M ++
Sbjct: 843 LESIAEQETPKTPVLGCGITYSLMKKNLRANSFLPSRINWAIQSSGVDYLHLLCCSMEYI 902
Query: 786 VSR---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIPLSISF 842
+ + + R ISIHDEIR+LV +++KY A+AL ++N+ TRA +++ + ++P + +F
Sbjct: 903 IKKYNLEARLCISIHDEIRFLVSEKDKYRAAMALQISNIWTRAMFCQQMGINELPQNCAF 962
Query: 843 FSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKANGVIG 895
FS V+ID V+RKE + DC TPSN IP GE LDI Q +DK+N +G
Sbjct: 963 FSQVDIDSVIRKEVNMDCITPSN------KTAIPHGEALDINQLLDKSNSKLG 1009
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/337 (26%), Positives = 128/337 (37%), Gaps = 117/337 (34%)
Query: 3 DESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLAT 62
D+ W NVS+LNSL +V K +C+ LDKTDR+ F I N+ L+ YCA D AT
Sbjct: 319 DDPWLNVSALNSLKDVAKFHCKID-LDKTDRDFFASTDKSTIIENFQKLVNYCATDVTAT 377
Query: 63 FEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLA 122
+V +FP+FL++ PHPV+ AG+ LS LP L
Sbjct: 378 SQVFDKIFPVFLKKCPHPVSFAGLKSLSKCILPTKL------------------------ 413
Query: 123 GMLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHD--DKYKDSL 180
N+W Y N S + V+++S ++ + + LL D D Y
Sbjct: 414 -------------NDWNDYLNSSESLYQQSKVQIESKIV-QIIKDIVLLKDKPDFYLKDP 459
Query: 181 WLWDQDWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRRELVEKF 240
WL DW+ K L+L KK
Sbjct: 460 WLSQLDWTTKPLRLTKKG------------------------------------------ 477
Query: 241 KPLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIPGP 300
+P L G+PEWYR+L KD V +
Sbjct: 478 ---------VPAKCQKLPGFPEWYRQLF-----PSKDTVEPK------------------ 505
Query: 301 SLISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPY 337
I+ +I P L L+W++ P+ + + GW + VP+
Sbjct: 506 --ITIKSRIIPILFKLSWENSPVIWSKESGWCFNVPH 540
>gi|190407627|gb|EDV10894.1| mitochondrial DNA polymerase catalytic subunit [Saccharomyces
cerevisiae RM11-1a]
Length = 1254
Score = 363 bits (933), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 194/473 (41%), Positives = 279/473 (58%), Gaps = 48/473 (10%)
Query: 431 FIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEISRMLSYWRNNHERVKK 490
K+PH +G N N L++ + + F L A + ++I+ SYW + ER++
Sbjct: 551 LFKVPHPNGPTFNCTNLLTKSYNHFFEKGVLKSESELAHQALQINSSGSYWMSARERIQS 610
Query: 491 QFVVWLNK-----KDLPRRLVENIESEGRDYGVILPQLIVSGTLTRRAVEATWMTASNAV 545
QFVV K + L + N E + D +I+P+++ GT+TRRAVE TW+TASNA
Sbjct: 611 QFVVPSCKFPNEFQSLSAKSSLNNE-KTNDLAIIIPKIVPMGTITRRAVENTWLTASNAK 669
Query: 546 GERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKS 605
R+GSEL+ ++AP GY +GADVDS+ELWIAS++GDS HG T +GWM L G K+
Sbjct: 670 ANRIGSELKTQVKAPPGYCFVGADVDSEELWIASLVGDS-IFNVHGGTAIGWMCLEGTKN 728
Query: 606 NATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMY 665
TD+H+ TA+ +G SR AKI NY RIYGAG +FA +LLK+FNP ++ + K A K+Y
Sbjct: 729 EGTDLHTKTAQILGCSRNEAKIFNYGRIYGAGAKFASQLLKRFNPSLTDEETKKIANKLY 788
Query: 666 TLTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQWYGGTESAMFNR 725
TKGK T K+F K WYGG+ES +FN+
Sbjct: 789 ENTKGK-------------------------------TKRSKLFKK-FWYGGSESILFNK 816
Query: 726 LEEIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLVCMRWL 785
LE IA P TP L C ++ +L + + F+ +RINW +QS VD+LHL+ M ++
Sbjct: 817 LESIAEQETPKTPVLGCGITYSLMKKNLRANSFLPSRINWAIQSSGVDYLHLLCCSMEYI 876
Query: 786 VSR---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIPLSISF 842
+ + + R ISIHDEIR+LV +++KY A+AL ++N+ TRA +++ + ++P + +F
Sbjct: 877 IKKYNLEARLCISIHDEIRFLVSEKDKYRAAMALQISNIWTRAMFCQQMGINELPQNCAF 936
Query: 843 FSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKANGVIG 895
FS V+ID V+RKE + DC TPSN IP GE LDI Q +DK+N +G
Sbjct: 937 FSQVDIDSVIRKEVNMDCITPSN------KTAIPHGEALDINQLLDKSNSKLG 983
Score = 107 bits (267), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 88/337 (26%), Positives = 128/337 (37%), Gaps = 117/337 (34%)
Query: 3 DESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLAT 62
D+ W NVS+LNSL +V K +C+ LDKTDR+ F I N+ L+ YCA D AT
Sbjct: 293 DDPWLNVSALNSLKDVAKFHCKID-LDKTDRDFFASTDKSTIIENFQKLVNYCATDVTAT 351
Query: 63 FEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLA 122
+V +FP+FL++ PHPV+ AG+ LS LP L
Sbjct: 352 SQVFDKIFPVFLKKCPHPVSFAGLKSLSKCILPTKL------------------------ 387
Query: 123 GMLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHD--DKYKDSL 180
N+W Y N S + V+++S ++ + + LL D D Y
Sbjct: 388 -------------NDWNDYLNSSESLYQQSKVQIESKIV-QIIKDIVLLKDKPDFYLKDP 433
Query: 181 WLWDQDWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRRELVEKF 240
WL DW+ K L+L KK
Sbjct: 434 WLSQLDWTTKPLRLTKKG------------------------------------------ 451
Query: 241 KPLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIPGP 300
+P L G+PEWYR+L KD V +
Sbjct: 452 ---------VPAKCQKLPGFPEWYRQLF-----PSKDTVEPK------------------ 479
Query: 301 SLISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPY 337
I+ +I P L L+W++ P+ + + GW + VP+
Sbjct: 480 --ITIKSRIIPILFKLSWENSPVIWSKESGWCFNVPH 514
>gi|448533778|ref|XP_003870699.1| Mip1 protein [Candida orthopsilosis Co 90-125]
gi|380355054|emb|CCG24570.1| Mip1 protein [Candida orthopsilosis]
Length = 1363
Score = 363 bits (933), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 201/500 (40%), Positives = 288/500 (57%), Gaps = 40/500 (8%)
Query: 391 CSKSAKRLEVIANVLDKKKLAEASSTDTSTDDADTPREIG----FIKLPHKDGEHLNVGN 446
C K EV A + K + + + + D E G K+PH DG +
Sbjct: 542 CFKVPFDEEVFAYLFSKNYVRATLTPEENDATHDKLHEDGKSYVLFKVPHPDGPKKRCTS 601
Query: 447 PLSRDFINKFSDNSLAGVDIGAKRIIEISRMLSYWRNNHERVKKQFVVWLNKKDLPRRLV 506
LS++++ F D +L AK+I++++ SYW + R+ QFVV+ NK+ +
Sbjct: 602 ILSKNYMKYFDDGTLTSEYDYAKKILKLNNEASYWMGSRNRIMDQFVVY-NKEGKNKFFD 660
Query: 507 ENIES-EGRDYGVILPQLIVSGTLTRRAVEATWMTASNAVGERVGSELRAMIQAPDGYSI 565
E E +D G+I+P L GT+TR A E TW+TASNA R+GSEL+A+I+AP+GY
Sbjct: 661 TKKECLEHKDMGIIIPNLASMGTITRGATENTWLTASNAKKNRIGSELKALIEAPEGYCF 720
Query: 566 IGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMHSITAKAVGISREHA 625
IGADVDS+ELWIAS++GDS HG + LGWMTL G+KS TD+HS TA +GISR A
Sbjct: 721 IGADVDSEELWIASLVGDSMFGI-HGGSALGWMTLEGEKSQGTDLHSKTASILGISRNDA 779
Query: 626 KIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKGKKLYRLKDGHLEELI 685
K+ NY RIYGAG FA RLLKQFN E+S + + A+K+Y TKG
Sbjct: 780 KVFNYGRIYGAGVTFATRLLKQFNSELSDAKTEEIAQKLYASTKG--------------- 824
Query: 686 KRVYSKYEAREVCSAYNTSVDKIFDKPQWYGGTESAMFNRLEEIATSLQPVTPFLNCRLS 745
+ + K +YGG+ES MFN LE IA +P TP L ++
Sbjct: 825 ---------------MTQTPRSLGSKKLYYGGSESIMFNALESIAHQPEPKTPVLGASIT 869
Query: 746 RALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLVCMRWLVSR---DTRFVISIHDEIRY 802
AL + + ++ +R+NW +QS VD+LHL++V M +L+ + D R I++HDE+RY
Sbjct: 870 DALNAKNLKKNTYMTSRVNWTIQSSGVDYLHLLIVSMEYLIEKYGIDARLAITVHDELRY 929
Query: 803 LVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIPLSISFFSGVEIDKVLRKESDNDCKT 862
LV +++KY AL L ++NL TRA ++L + ++P S +FFS V+ID VLRKE DC T
Sbjct: 930 LVKEKDKYIAALLLQISNLWTRAMFCEQLGIKEVPQSCAFFSEVDIDHVLRKEVSMDCVT 989
Query: 863 PSNPYGLCKGYGIPLGEILD 882
PS+P + G + + ++L+
Sbjct: 990 PSHPNPIVPGESLNINQLLE 1009
Score = 85.1 bits (209), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 83/350 (23%), Positives = 126/350 (36%), Gaps = 124/350 (35%)
Query: 1 MTDESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTL 60
+ ++ W S NSL+ V K +C G ++KTDR F I N++ LM YCA D
Sbjct: 317 IQEDPWLLTGSPNSLANVAKFHC-GIEMNKTDREYFASEDPRVIVKNFNLLMNYCAHDVD 375
Query: 61 ATFEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVT 120
AT++ V + LFP F + PHPV+
Sbjct: 376 ATYK--------------------------------------VTKKLFPDFFTKVPHPVS 397
Query: 121 LAGMLELSTAYLPVNNNWVKYFN--ESCQTFN--DLNVEMKSLLMDK---CDQACSLLHD 173
A + L + LP + W Y ESC N ++N +K L +D ++ S L
Sbjct: 398 FAALKHLGSLILPTSTKWKSYIESAESCYDANRAEVNDTLKKLALDLIRFIEKKDSKLR- 456
Query: 174 DKYKDSLWLWDQDWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRR 233
KY++ WL +W +K + KK + Y+ N
Sbjct: 457 PKYENDPWLNQLNWDLKRGRFKKDGSP--------------YKRN--------------- 487
Query: 234 RELVEKFKPLMQTKDRLPVNSSYLIGYPEWYRKL--CVKPHSADKDAVSKQELIHDGISD 291
+YL GYPEWYR L + P +
Sbjct: 488 ---------------------AYLTGYPEWYRDLWGSISPAGTQMN-------------- 512
Query: 292 TSEAWIPGPSLISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTDI 341
++ +ITP LL L W++ PL + GW + VP+ ++
Sbjct: 513 -----------LTLKTRITPLLLKLKWENYPLFWTDSEGWCFKVPFDEEV 551
>gi|1129171|emb|CAA88012.1| mitochondrial DNA polymerase gamma [Schizosaccharomyces pombe]
Length = 1018
Score = 362 bits (929), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 197/465 (42%), Positives = 277/465 (59%), Gaps = 46/465 (9%)
Query: 431 FIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEISRMLSYWRNNHERVKK 490
F K+PHKDG +PLS+ + F + L AK+ +E+S SYW + +R++
Sbjct: 549 FFKVPHKDGPEARCCSPLSKSYHAYFEEGILQSDYEVAKKALEMSASCSYWSSARDRIRS 608
Query: 491 QFVVWLNKKDLPRRLVENIESEGRDYGVILPQLIVSGTLTRRAVEATWMTASNAVGERVG 550
Q VVW +L + S +G+ILP +I GT+TRRAVE TW+TASN+ R+G
Sbjct: 609 QMVVWDKDAEL------GVPSSVDGFGIILPCIIPMGTVTRRAVENTWLTASNSKKNRLG 662
Query: 551 SELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDM 610
SEL+AMI+APDGY+ +GADVDS+ELWI +++GDS + HGAT LG MTL G+KS TD+
Sbjct: 663 SELKAMIRAPDGYTFVGADVDSEELWIVALMGDSQ-FRLHGATALGMMTLEGKKSEGTDL 721
Query: 611 HSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKG 670
HS TA +G+SR+ AK+ NY R+YGAG + LL Q NP + ++AK A+K+Y TKG
Sbjct: 722 HSKTAAILGVSRDSAKVFNYGRLYGAGLKHTTLLLMQMNPTLKTAEAKELAKKLYASTKG 781
Query: 671 ---KKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQWYGGTESAMFNRLE 727
K RL++ L +L W GTES +FN+LE
Sbjct: 782 VKSKMSKRLQEMGLPKLTF---------------------------WSQGTESFVFNKLE 814
Query: 728 EIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLVCMRWLVS 787
+A P TP L+ + +AL + + F+ +R+NW +QS AVD+LHL+LV M L+
Sbjct: 815 AMAQLPSPRTPVLDAGIQQALSSKNLSKNSFMTSRVNWAIQSSAVDYLHLLLVSMNHLIK 874
Query: 788 R---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIPLSISFFS 844
+ + R +++HDE+RYL D++KY A AL V NL TRAF ++L + ++P S++FFS
Sbjct: 875 KYYLEARLSLTVHDEVRYLSSDKDKYRVAFALQVANLWTRAFFCQRLGINELPQSVAFFS 934
Query: 845 GVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDK 889
V+ID VLRK+ DC TPSN IP GE L I ++K
Sbjct: 935 SVDIDHVLRKDVKMDCVTPSN------KVPIPPGEELTIESVLEK 973
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 91/207 (43%), Gaps = 43/207 (20%)
Query: 1 MTDESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTL 60
+ E W SS+NSL +V K +C LDK+ R+ F E I + L+TYCA DT
Sbjct: 299 LKQEPWLAHSSVNSLKDVAKFHC-NITLDKSKRDDFASLEKEPILQKLNELITYCAHDTY 357
Query: 61 ATFEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVT 120
+T +V + +FP FLE PHP T + ML L +
Sbjct: 358 STHQVFKKVFPQFLEVCPHPATFSAMLSLGS----------------------------- 388
Query: 121 LAGMLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLH--DDKYKD 178
+LPVN++W +Y N + + + + L ++A L++ D KD
Sbjct: 389 ---------VFLPVNHSWTRYINGVEEQYQQMIQLVDQKLSQYAEKAKDLINTKDTVLKD 439
Query: 179 SLWLWDQDWSVKDLKLK-KKANKTLSV 204
WL DW+ +L K KKA + + V
Sbjct: 440 P-WLRQLDWTPCNLYRKLKKATQEVPV 465
>gi|1420721|emb|CAA99652.1| MIP1 [Saccharomyces cerevisiae]
gi|392296658|gb|EIW07760.1| Mip1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 1280
Score = 362 bits (929), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 193/473 (40%), Positives = 278/473 (58%), Gaps = 48/473 (10%)
Query: 431 FIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEISRMLSYWRNNHERVKK 490
K+PH +G N N L++ + + F L A + ++I+ SYW + ER++
Sbjct: 577 LFKVPHPNGPTFNCTNLLTKSYNHFFEKGVLKSESELAHQALQINSSGSYWMSARERIQS 636
Query: 491 QFVVWLNK-----KDLPRRLVENIESEGRDYGVILPQLIVSGTLTRRAVEATWMTASNAV 545
QFVV K + L + N E + D +I+P+++ GT+TRRAVE W+TASNA
Sbjct: 637 QFVVPSCKFPNEFQSLSAKSSLNNE-KTNDLAIIIPKIVPMGTITRRAVENAWLTASNAK 695
Query: 546 GERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKS 605
R+GSEL+ ++AP GY +GADVDS+ELWIAS++GDS HG T +GWM L G K+
Sbjct: 696 ANRIGSELKTQVKAPPGYCFVGADVDSEELWIASLVGDS-IFNVHGGTAIGWMCLEGTKN 754
Query: 606 NATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMY 665
TD+H+ TA+ +G SR AKI NY RIYGAG +FA +LLK+FNP ++ + K A K+Y
Sbjct: 755 EGTDLHTKTAQILGCSRNEAKIFNYGRIYGAGAKFASQLLKRFNPSLTDEETKKIANKLY 814
Query: 666 TLTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQWYGGTESAMFNR 725
TKGK T K+F K WYGG+ES +FN+
Sbjct: 815 ENTKGK-------------------------------TKRSKLFKK-FWYGGSESILFNK 842
Query: 726 LEEIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLVCMRWL 785
LE IA P TP L C ++ +L + + F+ +RINW +QS VD+LHL+ M ++
Sbjct: 843 LESIAEQETPKTPVLGCGITYSLMKKNLRANSFLPSRINWAIQSSGVDYLHLLCCSMEYI 902
Query: 786 VSR---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIPLSISF 842
+ + + R ISIHDEIR+LV +++KY A+AL ++N+ TRA +++ + ++P + +F
Sbjct: 903 IKKYNLEARLCISIHDEIRFLVSEKDKYRAAMALQISNIWTRAMFCQQMGINELPQNCAF 962
Query: 843 FSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKANGVIG 895
FS V+ID V+RKE + DC TPSN IP GE LDI Q +DK+N +G
Sbjct: 963 FSQVDIDSVIRKEVNMDCITPSN------KTAIPHGEALDINQLLDKSNSKLG 1009
Score = 107 bits (267), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 88/337 (26%), Positives = 128/337 (37%), Gaps = 117/337 (34%)
Query: 3 DESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLAT 62
D+ W NVS+LNSL +V K +C+ LDKTDR+ F I N+ L+ YCA D AT
Sbjct: 319 DDPWLNVSALNSLKDVAKFHCKID-LDKTDRDFFASTDKSTIIENFQKLVNYCATDVTAT 377
Query: 63 FEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLA 122
+V +FP+FL++ PHPV+ AG+ LS LP L
Sbjct: 378 SQVFDEIFPVFLKKCPHPVSFAGLKSLSKCILPTKL------------------------ 413
Query: 123 GMLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHD--DKYKDSL 180
N+W Y N S + V+++S ++ + + LL D D Y
Sbjct: 414 -------------NDWNDYLNSSESLYQQSKVQIESKIV-QIIKDIVLLKDKPDFYLKDP 459
Query: 181 WLWDQDWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRRELVEKF 240
WL DW+ K L+L KK
Sbjct: 460 WLSQLDWTTKPLRLTKKG------------------------------------------ 477
Query: 241 KPLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIPGP 300
+P L G+PEWYR+L KD V +
Sbjct: 478 ---------VPAKCQKLPGFPEWYRQLF-----PSKDTVEPK------------------ 505
Query: 301 SLISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPY 337
I+ +I P L L+W++ P+ + + GW + VP+
Sbjct: 506 --ITIKSRIIPILFKLSWENSPVIWSKESGWCFNVPH 540
>gi|83578108|ref|NP_014975.2| Mip1p [Saccharomyces cerevisiae S288c]
gi|1706509|sp|P15801.3|DPOG_YEAST RecName: Full=DNA polymerase gamma; AltName: Full=Mitochondrial DNA
polymerase catalytic subunit
gi|1163066|emb|CAA89977.1| MIP1 [Saccharomyces cerevisiae]
gi|285815200|tpg|DAA11093.1| TPA: Mip1p [Saccharomyces cerevisiae S288c]
Length = 1254
Score = 362 bits (928), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 193/473 (40%), Positives = 278/473 (58%), Gaps = 48/473 (10%)
Query: 431 FIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEISRMLSYWRNNHERVKK 490
K+PH +G N N L++ + + F L A + ++I+ SYW + ER++
Sbjct: 551 LFKVPHPNGPTFNCTNLLTKSYNHFFEKGVLKSESELAHQALQINSSGSYWMSARERIQS 610
Query: 491 QFVVWLNK-----KDLPRRLVENIESEGRDYGVILPQLIVSGTLTRRAVEATWMTASNAV 545
QFVV K + L + N E + D +I+P+++ GT+TRRAVE W+TASNA
Sbjct: 611 QFVVPSCKFPNEFQSLSAKSSLNNE-KTNDLAIIIPKIVPMGTITRRAVENAWLTASNAK 669
Query: 546 GERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKS 605
R+GSEL+ ++AP GY +GADVDS+ELWIAS++GDS HG T +GWM L G K+
Sbjct: 670 ANRIGSELKTQVKAPPGYCFVGADVDSEELWIASLVGDS-IFNVHGGTAIGWMCLEGTKN 728
Query: 606 NATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMY 665
TD+H+ TA+ +G SR AKI NY RIYGAG +FA +LLK+FNP ++ + K A K+Y
Sbjct: 729 EGTDLHTKTAQILGCSRNEAKIFNYGRIYGAGAKFASQLLKRFNPSLTDEETKKIANKLY 788
Query: 666 TLTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQWYGGTESAMFNR 725
TKGK T K+F K WYGG+ES +FN+
Sbjct: 789 ENTKGK-------------------------------TKRSKLFKK-FWYGGSESILFNK 816
Query: 726 LEEIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLVCMRWL 785
LE IA P TP L C ++ +L + + F+ +RINW +QS VD+LHL+ M ++
Sbjct: 817 LESIAEQETPKTPVLGCGITYSLMKKNLRANSFLPSRINWAIQSSGVDYLHLLCCSMEYI 876
Query: 786 VSR---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIPLSISF 842
+ + + R ISIHDEIR+LV +++KY A+AL ++N+ TRA +++ + ++P + +F
Sbjct: 877 IKKYNLEARLCISIHDEIRFLVSEKDKYRAAMALQISNIWTRAMFCQQMGINELPQNCAF 936
Query: 843 FSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKANGVIG 895
FS V+ID V+RKE + DC TPSN IP GE LDI Q +DK+N +G
Sbjct: 937 FSQVDIDSVIRKEVNMDCITPSN------KTAIPHGEALDINQLLDKSNSKLG 983
Score = 107 bits (267), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 88/337 (26%), Positives = 128/337 (37%), Gaps = 117/337 (34%)
Query: 3 DESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLAT 62
D+ W NVS+LNSL +V K +C+ LDKTDR+ F I N+ L+ YCA D AT
Sbjct: 293 DDPWLNVSALNSLKDVAKFHCKID-LDKTDRDFFASTDKSTIIENFQKLVNYCATDVTAT 351
Query: 63 FEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLA 122
+V +FP+FL++ PHPV+ AG+ LS LP L
Sbjct: 352 SQVFDEIFPVFLKKCPHPVSFAGLKSLSKCILPTKL------------------------ 387
Query: 123 GMLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHD--DKYKDSL 180
N+W Y N S + V+++S ++ + + LL D D Y
Sbjct: 388 -------------NDWNDYLNSSESLYQQSKVQIESKIV-QIIKDIVLLKDKPDFYLKDP 433
Query: 181 WLWDQDWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRRELVEKF 240
WL DW+ K L+L KK
Sbjct: 434 WLSQLDWTTKPLRLTKKG------------------------------------------ 451
Query: 241 KPLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIPGP 300
+P L G+PEWYR+L KD V +
Sbjct: 452 ---------VPAKCQKLPGFPEWYRQLF-----PSKDTVEPK------------------ 479
Query: 301 SLISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPY 337
I+ +I P L L+W++ P+ + + GW + VP+
Sbjct: 480 --ITIKSRIIPILFKLSWENSPVIWSKESGWCFNVPH 514
>gi|366993783|ref|XP_003676656.1| hypothetical protein NCAS_0E02270 [Naumovozyma castellii CBS 4309]
gi|342302523|emb|CCC70297.1| hypothetical protein NCAS_0E02270 [Naumovozyma castellii CBS 4309]
Length = 1168
Score = 361 bits (926), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 203/489 (41%), Positives = 281/489 (57%), Gaps = 51/489 (10%)
Query: 404 VLDKKKLAEASSTDTSTDDADTPREIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAG 463
V D+ +++ S DD +I +K+PH +G N LS+ +I+ F N L
Sbjct: 570 VADEDSISQYRELSHSIDDNGDSDQI-LLKVPHPNGPTFNCTTLLSKPYIHYFEKNVLTS 628
Query: 464 VDIGAKRIIEISRMLSYWRNNHERVKKQFVVWLNKKDLPRRL------VENIESEGRDYG 517
A + + ++ SYW ER+ QFVV + KD + V E + G
Sbjct: 629 DSELAHQALNMNSSGSYWMAARERIMSQFVV--SGKDFNKEFNPLSNKVIGTPGEKEELG 686
Query: 518 VILPQLIVSGTLTRRAVEATWMTASNAVGERVGSELRAMIQAPDGYSIIGADVDSQELWI 577
+ILP +I GT+TRRAVE TW+TASNA R+GSEL+A ++AP GY +GADVDS+ELWI
Sbjct: 687 IILPTVIPMGTVTRRAVENTWLTASNAKANRIGSELKAQVKAPKGYCFVGADVDSEELWI 746
Query: 578 ASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMHSITAKAVGISREHAKIINYARIYGAG 637
AS++GDS HG T +GWM L G K+ TD+H+ TA+ +G SR AKI NY RIYGAG
Sbjct: 747 ASLVGDS-VFNIHGGTAIGWMCLEGTKNEGTDLHTKTAEILGCSRNEAKIFNYGRIYGAG 805
Query: 638 ERFAERLLKQFNPEMSKSDAKSKARKMYTLTKGKKLYRLKDGHLEELIKRVYSKYEAREV 697
+FA LLK+FNP +S +AK A K+Y TKGK
Sbjct: 806 VKFAGTLLKRFNPSLSDDEAKKTAIKLYENTKGK-------------------------- 839
Query: 698 CSAYNTSVDKIFDKPQWYGGTESAMFNRLEEIATSLQPVTPFLNCRLSRALEPVSEDDSK 757
T +IF K WYGG+ES +FN+LE IA +P TP L C ++ +L + +
Sbjct: 840 -----TKRSRIFKK-FWYGGSESILFNKLESIAEQDEPKTPVLGCGITFSLMKRNLRANS 893
Query: 758 FIQTRINWVVQSGAVDFLHLMLVCMRWLVSR---DTRFVISIHDEIRYLVPDEEKYETAL 814
F+ +RINW +QS VD+LHL+ M +L+ + D R ISIHDEIRYL +++KY+ A+
Sbjct: 894 FLPSRINWAIQSSGVDYLHLLCCSMNYLILKYGLDARLTISIHDEIRYLSSEKDKYKVAM 953
Query: 815 ALHVTNLLTRAFCIKKLDMTDIPLSISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYG 874
AL ++N+ TRA +++ + D+P + +FFS V+ID V+RKE + DC T SN
Sbjct: 954 ALQISNIWTRAIFCEQMGIDDLPQNCAFFSAVDIDHVMRKEVNMDCITLSN------KVA 1007
Query: 875 IPLGEILDI 883
IP GE LDI
Sbjct: 1008 IPHGENLDI 1016
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/337 (22%), Positives = 122/337 (36%), Gaps = 118/337 (35%)
Query: 3 DESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLAT 62
++ W N+S++NSLS+V +C G +DK R+ F + + +N+ L+TYCA D AT
Sbjct: 333 EDPWLNISTMNSLSDVALFHC-GIKMDKEPRDFFASLDKQVVIDNFQKLVTYCATDVEAT 391
Query: 63 FEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLA 122
V + P FL++ PHPV+ + LS+ LP A
Sbjct: 392 SHVFDKVLPRFLKKCPHPVSFGALKTLSSFILPTRRA----------------------- 428
Query: 123 GMLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHD----DKYKD 178
W Y N S + + + +E++ ++ ++ + D D+ KD
Sbjct: 429 --------------EWDDYINRSEKLYQESKLEIERKIILIIEELVKIKDDPVKLDQIKD 474
Query: 179 SLWLWDQDWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRRELVE 238
WL DW++K L+L KK
Sbjct: 475 DPWLRQLDWTIKPLRLTKKG---------------------------------------- 494
Query: 239 KFKPLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIP 298
+PV L GYPEWYR L S TS+
Sbjct: 495 -----------VPVKGQKLPGYPEWYRSLFP--------------------SKTSQQ--- 520
Query: 299 GPSLISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLV 335
I+ +I P L+W+ P+ F + GW + +
Sbjct: 521 --PQITIKSRIIPIFFKLSWEGHPVFFTKESGWCFPI 555
>gi|255713056|ref|XP_002552810.1| KLTH0D01980p [Lachancea thermotolerans]
gi|238934190|emb|CAR22372.1| KLTH0D01980p [Lachancea thermotolerans CBS 6340]
Length = 1223
Score = 357 bits (917), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 193/461 (41%), Positives = 270/461 (58%), Gaps = 46/461 (9%)
Query: 428 EIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEISRMLSYWRNNHER 487
E K+PH +G+ N +S+ ++ F L A ++I+ +YW + ER
Sbjct: 528 EFTLFKVPHPNGQQFNCTTLVSKQYVQFFEKGILTSHSELAHEALKINSSCAYWISARER 587
Query: 488 VKKQFVVWLNKKDLPRRL--VENIESEGRDYGVILPQLIVSGTLTRRAVEATWMTASNAV 545
V QFVV + +D P + +++ + +ILP +I GT+TRR+VE TW+TASNA
Sbjct: 588 VMSQFVV--STRDFPDQFKDLQHKTFSDEEISIILPSVIPMGTVTRRSVENTWLTASNAK 645
Query: 546 GERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKS 605
R+GSEL+A +QAP GY +GADVDS+ELWIAS++ DS HG TP+GWM L G KS
Sbjct: 646 KNRIGSELKAQVQAPPGYVFVGADVDSEELWIASLVSDS-VFNIHGGTPIGWMCLEGSKS 704
Query: 606 NATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMY 665
TDMH+ TA+ +G SR AKI NY RIYGAG +FA +LLK FNP ++ +AK A K+Y
Sbjct: 705 EGTDMHTKTAQILGCSRNEAKIFNYGRIYGAGVKFATQLLKNFNPGLTDYEAKETAEKLY 764
Query: 666 TLTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQWYGGTESAMFNR 725
+ TKG L+KR K F K WY G+ES +FN+
Sbjct: 765 SSTKG-------------LVKR------------------SKTFKK-FWYSGSESILFNK 792
Query: 726 LEEIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLVCMRWL 785
LE IA P TP L ++ +L + + F+ +RINW +QS VD+LHL+ M +L
Sbjct: 793 LEHIAEQAAPRTPVLGAGITSSLMKGNLGSNTFLPSRINWAIQSSGVDYLHLLCCSMNYL 852
Query: 786 VSR---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIPLSISF 842
+ + R +SIHDEIR+L +++KY+TA+AL ++NL TRA +++ + D+P + +F
Sbjct: 853 IKKFSLRARLALSIHDEIRFLTAEKDKYKTAMALQISNLWTRAVFCEQMGIKDLPQNCAF 912
Query: 843 FSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDI 883
FS V+ID V+RKE D DC TPSN IP GE DI
Sbjct: 913 FSAVDIDHVMRKEVDMDCVTPSN------KIPIPHGESKDI 947
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 79/342 (23%), Positives = 119/342 (34%), Gaps = 125/342 (36%)
Query: 3 DESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLAT 62
++ WT VS+LNSL +V L+C G LDK R+ F DI N++ ++ YCA D AT
Sbjct: 284 EDPWTTVSTLNSLKDVALLHC-GIKLDKAQRDYFATLDRNDIINDFTQMVDYCATDVEAT 342
Query: 63 FEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTL- 121
+V F+V+ FPLFL + PHPV+
Sbjct: 343 SKV-----------------------------------FDVV---FPLFLSKCPHPVSFG 364
Query: 122 AGMLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDKYKDSL- 180
A L ++ ++W Y +S + ++ ++ ++ L K K +L
Sbjct: 365 ALRLLSTSLLTTRGDSWKDYIEKSENLYQHSKQSIEKKILAIVEEVVKL----KDKKTLI 420
Query: 181 ----WLWDQDWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRREL 236
WL DW++K L++ KK
Sbjct: 421 EQDPWLSQLDWTIKPLRITKKG-------------------------------------- 442
Query: 237 VEKFKPLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAW 296
LP L GYPEWYR+L +S + LI
Sbjct: 443 -------------LPAKGQKLPGYPEWYRQLFPTKNSKQAQITIRNRLI----------- 478
Query: 297 IPGPSLISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYS 338
P L+W+ P+ + HGW + VP S
Sbjct: 479 --------------PLFFKLSWEGEPVIWTSSHGWCFAVPVS 506
>gi|363752908|ref|XP_003646670.1| hypothetical protein Ecym_5063 [Eremothecium cymbalariae
DBVPG#7215]
gi|356890306|gb|AET39853.1| hypothetical protein Ecym_5063 [Eremothecium cymbalariae
DBVPG#7215]
Length = 1189
Score = 356 bits (913), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 193/462 (41%), Positives = 274/462 (59%), Gaps = 46/462 (9%)
Query: 431 FIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEISRMLSYWRNNHERVKK 490
+++PH +G N N LS+ +++ L A+ ++I+ +YW + +R+
Sbjct: 559 LLRIPHPNGPDFNCTNLLSKPYLHFMEKGILQSQYPLAREALKINSSGAYWTASRDRIMG 618
Query: 491 QFVVWLNKKDLPR--RLVENIESEGRDYGVILPQLIVSGTLTRRAVEATWMTASNAVGER 548
Q VV +K + P ++ + + D+G I+P++I GT+TRRAVE TW+TASNA R
Sbjct: 619 QHVV--SKAEFPNQFKMFDGSPTNSVDFGAIIPRVIPMGTVTRRAVENTWLTASNAKKNR 676
Query: 549 VGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNAT 608
+GSEL+ + AP+GYS +GADVDS+ELWIAS++GDS HG T +GWM L G KS T
Sbjct: 677 IGSELKTKVIAPEGYSFVGADVDSEELWIASLVGDS-VFNIHGGTAIGWMCLEGTKSAGT 735
Query: 609 DMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLT 668
DMH+ TA +G SR+ AKI NY RIYGAG RFA ++LK+FNP ++ +AK A K+Y T
Sbjct: 736 DMHTKTANILGCSRDEAKIFNYGRIYGAGVRFATQMLKKFNPSLTAIEAKETAEKLYEST 795
Query: 669 KGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQWYGGTESAMFNRLEE 728
KG A+ +S F WYGG+ES +FNRLE
Sbjct: 796 KG----------------------------LAWRSSKFPKF----WYGGSESLVFNRLEL 823
Query: 729 IATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLVCMRWLVSR 788
IA +P+TP L ++ +L + + ++ +RINW +QS VD+LHL+ M +L+ +
Sbjct: 824 IAQQDEPLTPVLGAGITSSLIKKNLFKNTYLTSRINWTIQSSGVDYLHLLFCSMHYLIIK 883
Query: 789 ---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIPLSISFFSG 845
R ISIHDE+R+LV DE KY+ A+AL + NL TRA +++ + D+P +FFS
Sbjct: 884 YKLKARLCISIHDELRFLVADEHKYKAAMALQIANLWTRAVFCEQMGIEDLPQGCAFFSS 943
Query: 846 VEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTI 887
V+IDKVLRKE D DC TPSN IP GE L+I Q +
Sbjct: 944 VDIDKVLRKEVDMDCITPSN------NTPIPHGESLNITQLL 979
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 81/337 (24%), Positives = 119/337 (35%), Gaps = 117/337 (34%)
Query: 2 TDESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLA 61
D W S++NSL +V KL+C G +DKT + F ++I +++ + YCA D A
Sbjct: 310 ADFKWARYSTMNSLKDVAKLHC-GITMDKTVKEHFSSLDKQEIIDSFQLVTDYCASDVYA 368
Query: 62 TFEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTL 121
T +V +FP F E+ PHPV+ + LS LP P
Sbjct: 369 TSKVFDKIFPKFREKCPHPVSFGALRFLSNCILP--------------------VKPTKW 408
Query: 122 AGMLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDD--KYKDS 179
G ++ N + +S + D VE+ L + L DD K KD
Sbjct: 409 KGYID----------NAESLYQQSKKAIEDKIVEIVELTVQ--------LKDDMEKAKDD 450
Query: 180 LWLWDQDWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRRELVEK 239
W DW ++ +KL KNG
Sbjct: 451 PWYSQLDWEIEPVKL-----------------------TKNG------------------ 469
Query: 240 FKPLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIPG 299
LPV + L GYP WYR L + +KDA
Sbjct: 470 ----------LPVKNQKLPGYPNWYRSLYL-----NKDATRPN----------------- 497
Query: 300 PSLISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVP 336
I+ ++ P LTW+ P+ + + GW + VP
Sbjct: 498 ---ITIRSRLIPIFFKLTWEGFPVIWTKPFGWCFEVP 531
>gi|45188230|ref|NP_984453.1| ADR357Cp [Ashbya gossypii ATCC 10895]
gi|44983074|gb|AAS52277.1| ADR357Cp [Ashbya gossypii ATCC 10895]
gi|374107667|gb|AEY96575.1| FADR357Cp [Ashbya gossypii FDAG1]
Length = 1131
Score = 355 bits (910), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 200/487 (41%), Positives = 277/487 (56%), Gaps = 49/487 (10%)
Query: 402 ANVLDKKKLAEASSTDTSTDDADTPREIGF--IKLPHKDGEHLNVGNPLSRDFINKFSDN 459
A KK A A+S D R +G+ ++PH S+ +++ N
Sbjct: 519 AGTFLKKNYAIANSPDFD-------RNVGYTAFRIPHPSSAEQRTTTLFSKPYMHFMDKN 571
Query: 460 SLAGVDIGAKRIIEISRMLSYWRNNHERVKKQFVVWLNKKDLPRR--LVENIESEGRDYG 517
L A+ ++I+ SYW ER+K Q VV +K+D P + +V+ S G
Sbjct: 572 VLQSEYSLAREALKINSSGSYWTAARERIKTQHVV--SKEDFPDQFAMVDGTPSRDDQVG 629
Query: 518 VILPQLIVSGTLTRRAVEATWMTASNAVGERVGSELRAMIQAPDGYSIIGADVDSQELWI 577
I+P++I GT+TRRAVE TW+TASNA R+GSEL+ I AP+GYS +GADVDS+ELWI
Sbjct: 630 AIIPKIIPMGTVTRRAVENTWLTASNAKANRIGSELKTKIVAPEGYSFVGADVDSEELWI 689
Query: 578 ASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMHSITAKAVGISREHAKIINYARIYGAG 637
AS+IGDS HG T +G+M L G K TDMH+ TA +G SR AKI NY RIYGAG
Sbjct: 690 ASLIGDS-VFNIHGGTAIGYMCLEGTKDAGTDMHTKTASILGCSRNEAKIFNYGRIYGAG 748
Query: 638 ERFAERLLKQFNPEMSKSDAKSKARKMYTLTKGKKLYRLKDGHLEELIKRVYSKYEAREV 697
RFA +LLKQFNP +S+ ++ A ++Y TKGK
Sbjct: 749 VRFAAQLLKQFNPTLSEEQTRATAERLYEATKGK-------------------------- 782
Query: 698 CSAYNTSVDKIFDKPQWYGGTESAMFNRLEEIATSLQPVTPFLNCRLSRALEPVSEDDSK 757
Y++ + K F W+GG+ES +FN+LE IA QP TP L ++ +L +
Sbjct: 783 --TYHSKIFKKF----WFGGSESILFNKLEHIAEQDQPRTPVLGAGITVSLLKRNLGKDT 836
Query: 758 FIQTRINWVVQSGAVDFLHLMLVCMRWLVSR---DTRFVISIHDEIRYLVPDEEKYETAL 814
F+ +RINW +QS VD+LHL+ M +L+ + R ISIHDE+RYLV +E++Y AL
Sbjct: 837 FLPSRINWAIQSSGVDYLHLLFCSMHYLIEKYRLRARVCISIHDELRYLVANEDRYRVAL 896
Query: 815 ALHVTNLLTRAFCIKKLDMTDIPLSISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYG 874
AL V NL TRA +++ + D+P + +FFS V+ID VLRKE D DC TPSN + G
Sbjct: 897 ALQVANLWTRAIFCEQIGIDDLPQNCAFFSAVDIDHVLRKEVDMDCVTPSNQTPVPHGER 956
Query: 875 IPLGEIL 881
+ + ++L
Sbjct: 957 VTITDLL 963
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 54/91 (59%), Gaps = 1/91 (1%)
Query: 5 SWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLATFE 64
+W N+S++NSL +V KL+C L+KT R+ F +++ + + L+ YC+ D T +
Sbjct: 298 NWYNLSTMNSLRDVAKLHCNIN-LEKTLRDSFEALDKQEVIDKFQQLVDYCSTDVETTSK 356
Query: 65 VIQALFPLFLERFPHPVTLAGMLELSTAYLP 95
V ++PLF E+ PHPV+ + LS LP
Sbjct: 357 VFDKVYPLFREQCPHPVSFGALRFLSNCILP 387
>gi|254581264|ref|XP_002496617.1| ZYRO0D04246p [Zygosaccharomyces rouxii]
gi|238939509|emb|CAR27684.1| ZYRO0D04246p [Zygosaccharomyces rouxii]
Length = 1239
Score = 353 bits (906), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 193/469 (41%), Positives = 277/469 (59%), Gaps = 44/469 (9%)
Query: 431 FIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEISRMLSYWRNNHERVKK 490
++PH +G LS+ +I+ F L A+ + ++ SYW ER+
Sbjct: 578 LFRIPHPNGPQSACTTLLSKPYIHYFEKGILTSGSDFAREALHMNSSGSYWMAARERIMN 637
Query: 491 QFVVWLNK-KDLPRRLVENIESEGRD-YGVILPQLIVSGTLTRRAVEATWMTASNAVGER 548
QF V ++ + RL + ++ RD G+ILP ++ GT+TRRAVE TW+TASNA R
Sbjct: 638 QFNVPSSRFPNQFNRLDGSPQTSNRDDLGIILPGIVPMGTVTRRAVENTWLTASNAKENR 697
Query: 549 VGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNAT 608
+GSEL+ ++AP GYS +GADVDS+ELWIAS++ DS HG T +GWM L G K+ T
Sbjct: 698 IGSELKTQVKAPKGYSFVGADVDSEELWIASLVSDS-VFNIHGGTAIGWMCLEGTKNEGT 756
Query: 609 DMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLT 668
D+H+ TA+ +G +R AKI NY RIYGAG +FA +LLK+FNP + +A+ A ++Y T
Sbjct: 757 DLHTKTAQILGCNRNEAKIFNYGRIYGAGVKFATQLLKKFNPSLPDEEAQGIANQLYENT 816
Query: 669 KGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQWYGGTESAMFNRLEE 728
KGK I+R KIF K W+GG+ES +FN+LE
Sbjct: 817 KGK-------------IQR------------------SKIFKK-FWFGGSESILFNKLES 844
Query: 729 IATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLVCMRWLVSR 788
IA +P TP L C ++ +L + + F+ +RINW +QS VD+LHL+ M +L++
Sbjct: 845 IAEQDEPRTPVLGCGITFSLMKRNLRTNTFLPSRINWTIQSSGVDYLHLLCCSMNYLIAT 904
Query: 789 ---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIPLSISFFSG 845
R ISIHDEIR+LV DE+KY ++AL V+N+ TRA ++L + D+P + +FFS
Sbjct: 905 YHIKARLCISIHDEIRFLVADEDKYRASMALQVSNIWTRAIFCEQLGINDLPQNCAFFSA 964
Query: 846 VEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKANGVI 894
V+IDK+LRKE D DC TPSNP IP GE +D+ ++K ++
Sbjct: 965 VDIDKLLRKEVDMDCITPSNP------NPIPHGESIDMKTLLEKPGAML 1007
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 101/271 (37%), Gaps = 94/271 (34%)
Query: 1 MTDESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTL 60
+ ++ W VS++NSL +V L+C G +DK R+ F ++ ++ NL+ YCA D
Sbjct: 315 LEEDPWLRVSAMNSLKDVALLHC-GIRIDKDPRDRFATTDKNEVIQDFQNLVEYCATDVD 373
Query: 61 ATFEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVT 120
T +V ++PLFL++ PHPV+ + LS+ LP
Sbjct: 374 TTSQVFDKVWPLFLQKCPHPVSFGALRSLSSCILP------------------------- 408
Query: 121 LAGMLELSTAYLPVNNNWVKYFNESCQTF----NDLNVEMKSLLMDKCDQACSLLHDDKY 176
T Y N W Y N S + + + ++ ++ D + ++ +
Sbjct: 409 --------TQY----NEWTDYLNRSERIYLKSKQSIEDKITEIVEDTVKLRDEMSAEEIH 456
Query: 177 KDSLWLWDQDWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRREL 236
KD WL DW+ K LKL KK
Sbjct: 457 KDP-WLRQLDWTTKPLKLTKKG-------------------------------------- 477
Query: 237 VEKFKPLMQTKDRLPVNSSYLIGYPEWYRKL 267
+PV + L GYPEWYR L
Sbjct: 478 -------------VPVKNQKLPGYPEWYRSL 495
>gi|449685328|ref|XP_002166917.2| PREDICTED: DNA polymerase subunit gamma-1-like [Hydra
magnipapillata]
Length = 514
Score = 352 bits (903), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 180/377 (47%), Positives = 250/377 (66%), Gaps = 30/377 (7%)
Query: 438 DGEHLNVGNPLSRDFINKFSDNSLA-GVDIGAKRIIEISRMLSYWRNNHERVKKQFVVWL 496
+G NVGNPL++DF+NK D +LA D AK IE++ +LS+WRN +R+ Q VW
Sbjct: 134 NGNDYNVGNPLAKDFLNKIEDGTLATSSDYNAKEPIELNMLLSFWRNGRKRIMSQKTVWF 193
Query: 497 NKKDLPRRLVENIESEGRDYGVILPQLIVSGTLTRRAVEATWMTASNAVGERVGSELRAM 556
+ +GR GVILPQ++ +GT+TRR+VEATW+TASN + R+GSEL+++
Sbjct: 194 D--------------DGR--GVILPQVVTAGTVTRRSVEATWLTASNPMFNRIGSELKSL 237
Query: 557 IQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMHSITAK 616
I+ P GY ++GADVDSQELWIAS++GD+ + HG+T L WMTL G+KS+ TD+HS TA
Sbjct: 238 IRTPPGYVLVGADVDSQELWIASILGDAMFSNMHGSTALSWMTLQGKKSDRTDLHSKTAD 297
Query: 617 AVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKGKKLY-- 674
+G+SR+ AK+ NY RIYGAGE+FA RLL QFN +S + A+ KA K+Y TKG K Y
Sbjct: 298 TIGMSRDQAKVFNYGRIYGAGEKFAVRLLMQFNHNISLAQAEEKAAKLYATTKGIKSYLL 357
Query: 675 -----RLKDGHLEELIKRVYSKYEAREVCSAYNTSVD--KIFDKPQWYGGTESAMFNRLE 727
RL + + + S +E+ TS + ++ W+GG+ES MFN+LE
Sbjct: 358 TEEGLRLSESYGIPTSQGTISYINLKELLYLTKTSWENKELLVHKTWFGGSESDMFNKLE 417
Query: 728 EIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLVCMRWLVS 787
IA S +P TP LNC +++AL P + ++ +R+NWVVQS AVD+LHL+L CM+WL+
Sbjct: 418 SIAVSEEPRTPVLNCMITKALLPKYVQN-HYMTSRVNWVVQSSAVDYLHLVLTCMKWLIE 476
Query: 788 R---DTRFVISIHDEIR 801
+ D RF ISIHDE+R
Sbjct: 477 KYDIDARFCISIHDEVR 493
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 43/84 (51%), Gaps = 20/84 (23%)
Query: 253 NSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIPGPSLISTSMQITPK 312
N +L GYP WYRKLC+ P E++ GP +S+ ++TP
Sbjct: 41 NQLHLPGYPNWYRKLCMSP--------------------GEESYQSGPQSVSSQTRVTPL 80
Query: 313 LLSLTWKSMPLHFIRGHGWGYLVP 336
LL +TW PLH R +GWG+LVP
Sbjct: 81 LLRMTWDGYPLHHEREYGWGFLVP 104
>gi|326427333|gb|EGD72903.1| hypothetical protein PTSG_04632 [Salpingoeca sp. ATCC 50818]
Length = 1060
Score = 352 bits (902), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 192/481 (39%), Positives = 267/481 (55%), Gaps = 74/481 (15%)
Query: 430 GFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEISRMLSYWRNNHERVK 489
+ KLPHKDG+ G+P +++++ D L A +++ SYW + R+
Sbjct: 597 AYFKLPHKDGDKARCGSPFAKEYMALVEDGRLKSHSEEAAQVLSAMSACSYWSSARNRIL 656
Query: 490 KQFVVW---------------LNKKDLPRRLVENIESEGRD-------------YGVILP 521
QFVVW + LP ++ +D GVILP
Sbjct: 657 SQFVVWEDLVGSSMREWSTDRITPPPLPSTATTTNGADEQDGDGKNGNAAAADTRGVILP 716
Query: 522 QLIVSGTLTRRAVEATWMTASNAVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVI 581
+ GT++RRA E+TW+TASN R+GSEL+AM++AP G +GADVDSQELWIA+++
Sbjct: 717 FITTMGTISRRARESTWLTASNPKPNRIGSELKAMVRAPPGCKFVGADVDSQELWIAALL 776
Query: 582 GDSYCAKEHGATPLGWMTLSGQKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFA 641
GD+ HG+T LGWMTL G K + +DMH+ TA+ VG +KI NY RIYGAG FA
Sbjct: 777 GDARFTGIHGSTALGWMTLQGSKKDKSDMHTKTAEIVGCHTGGSKIFNYGRIYGAGRPFA 836
Query: 642 ERLLKQFNPEMSKSDAKSKARKMYTLTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAY 701
+ L+ QFNP + + +AK+ A ++Y TKG ++ YS
Sbjct: 837 KGLIMQFNPTIKEDEAKTLANELYDKTKG------------QMTSLGYS----------- 873
Query: 702 NTSVDKIFDKPQWYGGTESAMFNRLEEIATSLQPVTPFLNCRLSRALEPV------SEDD 755
GG+ES MFN+LEEIA P TPFL RL+ L+P +
Sbjct: 874 --------------GGSESEMFNQLEEIANRKVPKTPFLGFRLTAGLQPRYLAKKGRKKA 919
Query: 756 SKFIQTRINWVVQSGAVDFLHLMLVCMRWLVSR---DTRFVISIHDEIRYLVPDEEKYET 812
+ ++ TRINWVVQS AVD+LHLMLV M++ +++ R I+IHDE+RY+V DE+
Sbjct: 920 TDYLPTRINWVVQSSAVDYLHLMLVSMKYFITQYDMKARLCITIHDEVRYIVADEDVARF 979
Query: 813 ALALHVTNLLTRAFCIKKLDMTDIPLSISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKG 872
A ALH+TNL TRA +DM D+P ++FFS V++D VLRKE D D +TPSN + + G
Sbjct: 980 AFALHLTNLYTRAAFAASIDMWDLPQGVAFFSAVDVDTVLRKEVDQDVRTPSNKHNVPPG 1039
Query: 873 Y 873
Y
Sbjct: 1040 Y 1040
Score = 76.3 bits (186), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 61/94 (64%), Gaps = 2/94 (2%)
Query: 5 SWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLATFE 64
W SS SL++ ++ + G LDK+DR++FV G++ +I+ N + + YCA+D AT +
Sbjct: 412 GWMAHSSPASLADCHEHWV-GTPLDKSDRDLFVNGTMAEIKENVQDGIAYCARDVRATHD 470
Query: 65 VIQALFPLFLERF-PHPVTLAGMLELSTAYLPDT 97
V + +F ++ +F HP +++GMLE+ AYLP T
Sbjct: 471 VFKKVFDAYVSQFLGHPASMSGMLEMGKAYLPTT 504
>gi|402086930|gb|EJT81828.1| DNA polymerase gamma [Gaeumannomyces graminis var. tritici R3-111a-1]
Length = 1303
Score = 347 bits (891), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 182/378 (48%), Positives = 238/378 (62%), Gaps = 40/378 (10%)
Query: 517 GVILPQLIVSGTLTRRAVEATWMTASNAVGERVGSELRAMIQAPDGYSIIGADVDSQELW 576
G ILPQ+I GT+TRRAVE TW+TASNA RVGSEL+AMI+AP GYS +GADVDS+ELW
Sbjct: 807 GFILPQVIPMGTITRRAVENTWLTASNAKKNRVGSELKAMIKAPPGYSFVGADVDSEELW 866
Query: 577 IASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMHSITAKAVGISREHAKIINYARIYGA 636
IASV+GD+ K HG +G+MTL G K+ TD+HS TA +GISR +KI NY RIYGA
Sbjct: 867 IASVLGDAVF-KLHGGNAIGFMTLEGTKAAGTDLHSRTASILGISRNQSKIFNYGRIYGA 925
Query: 637 GERFAERLLKQFNPEMSKSDAKSKARKMYTLTKGKKLYRLKDGHLEELIKRVYSKYEARE 696
G +FA +LL+QFNP +S+S+ A K+Y TKG K
Sbjct: 926 GLKFASQLLRQFNPLLSESETSETATKLYAATKGAK------------------------ 961
Query: 697 VCSAYNTSVDKIFDKPQWYGGTESAMFNRLEEIATSLQPVTPFLNCRLSRALEPVSEDDS 756
T+ ++ +P W GGTES +FN+LEE A +P TP L ++ AL
Sbjct: 962 ------TNRSALYSRPFWRGGTESFVFNKLEEFAQQERPRTPVLGAGITEALMARYVSKG 1015
Query: 757 KFIQTRINWVVQSGAVDFLHLMLVCMRWLVSR---DTRFVISIHDEIRYLVPDEEKYETA 813
++ +RINW +QS VD+LHL++V M +L+ R D R I++HDEIRYLV D +KY TA
Sbjct: 1016 GYLTSRINWAIQSSGVDYLHLLIVSMDYLIRRYDIDARLAITVHDEIRYLVKDCDKYRTA 1075
Query: 814 LALHVTNLLTRAFCIKKLDMTDIPLSISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGY 873
+AL V+NL TRA +++ + D+P S ++FS V+ID VLRKE D DC TPS+
Sbjct: 1076 MALQVSNLWTRAMFAEQVGIRDLPQSAAYFSAVDIDHVLRKEVDMDCITPSH------AE 1129
Query: 874 GIPLGEILDIYQTIDKAN 891
IP GE LDI +D+
Sbjct: 1130 PIPHGESLDITALLDRGT 1147
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 107/501 (21%), Positives = 171/501 (34%), Gaps = 175/501 (34%)
Query: 3 DESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLAT 62
+E W SS+NSL EV K + +DK R+ E E I L+ YCA D + T
Sbjct: 377 EELWVGRSSVNSLREVAKFHLH-VTIDKAIRDDLGELDREGILGKLDELLDYCAADVVVT 435
Query: 63 FEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLA 122
V Q +FP FL PHPV+ A
Sbjct: 436 HRVY--------------------------------------QVVFPNFLNTCPHPVSFA 457
Query: 123 GMLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHD-DKYKDSLW 181
+ LS+ LPVN +W Y ++ + L+ + + L+ D+A + D +K+ W
Sbjct: 458 ALRHLSSVILPVNESWDAYIAKAEDVYQKLSDGVVARLVALTDKALEIKKDPEKWGSDPW 517
Query: 182 LWDQDWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRRELVEKFK 241
L DWS +++++ K K G+ E K+ RE
Sbjct: 518 LSQLDWSGQEVRMAKG--------------------KKKGDPPREALRQKKPRE------ 551
Query: 242 PLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIPGPS 301
P+WY+ L K GP
Sbjct: 552 -------------------PKWYKDLFPK--------------------------ATGPI 566
Query: 302 LISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTDIKVPDAENIPLEQLKQLYNNI 361
I+ +I P LL L+W PL + + W + +VP +
Sbjct: 567 NITVRSRIAPLLLRLSWDGHPLVWSDKYAWAF--------RVPRGQ-------------- 604
Query: 362 TKQDNCEANVDNAQNSLRDSVETNISFIDCSKSAKRLEVIANVLDKKKLAEASSTDTSTD 421
+S + + C S +++E + + DK +
Sbjct: 605 ------------------ESTYIDKQMLKCDMSDEKIERLRD--DKAHV----------- 633
Query: 422 DADTPREIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEISRMLSYW 481
+ KLPHKDG GNP+++ ++ F L AK ++++ SYW
Sbjct: 634 ---------YFKLPHKDGPDARCGNPMAKSYLPYFESGVLTSEYPYAKEALDMNASCSYW 684
Query: 482 RNNHERVKKQFVVWLNKKDLP 502
+ +R+ Q V+ + DLP
Sbjct: 685 ISARDRIMSQLAVY--QGDLP 703
>gi|312078568|ref|XP_003141795.1| hypothetical protein LOAG_06211 [Loa loa]
gi|307763041|gb|EFO22275.1| hypothetical protein LOAG_06211 [Loa loa]
Length = 1064
Score = 346 bits (888), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 239/734 (32%), Positives = 366/734 (49%), Gaps = 149/734 (20%)
Query: 234 RELVEKFKPLMQTKDRLP----VNSSYLIG--YPEWYRKLCVKPHSADKDAVSKQELIHD 287
+ELVEK + +Q+ P V+ S G +P WY L + + L+H
Sbjct: 399 KELVEKLEKPIQSYKHDPWMWSVDWSIRKGEKFPIWYESL-----------LRTKNLVHT 447
Query: 288 GISDTSEAWIPGPSLISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTDIKVPDAE 347
+ + S+A + ++ P+L L W PLH+ GWG+LVP + I + D
Sbjct: 448 PVEELSQA------DVKLKSRVVPRLFGLCWGPYPLHYKTDKGWGFLVPKDSRIALSDVP 501
Query: 348 NIPLEQLKQLYNNITKQDNCEANVDNAQNSLRDSVETNISFIDCSKSAKRLEVIANVLDK 407
+ + LR V+ I ++ I +V+ +
Sbjct: 502 EM------------------------EEVILRRRVKVTIP----------VKAILSVI-Q 526
Query: 408 KKLAEASSTDTSTDDADTPREIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIG 467
+ +AE T + GF KLPH +GEH NVG+P+S+ F + + L +
Sbjct: 527 QNIAEGIGDVVLTHSHSSISIFGFHKLPHPNGEHDNVGDPISKAFRLEIEEGVLRPMRY- 585
Query: 468 AKRIIEISRMLS---YWRNNHERVKKQFVVWLNKKDLPRRLVENIESEGRDYGVILPQLI 524
K +++ R + +W N +R ++Q VW + E D G I P +I
Sbjct: 586 KKEFLDLYRARNTTRFWNNYRDRFQEQVTVWFD--------------ENGDEGAIAPSII 631
Query: 525 VSGTLTRRAVEATWMTASNAVGER-VGSELRAMIQAPDGYSIIGADVDSQELWIASVIGD 583
+GT+TRRAV W+TA NA ++ +G+ L++M++ P + I+GADVDSQE WIA+++GD
Sbjct: 632 PAGTVTRRAVHKLWLTAINAKDDQMIGTNLKSMVECPQDWHIVGADVDSQEQWIAAMLGD 691
Query: 584 SYCAKE-HGATPLGWMTLSGQKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAE 642
+ GATP M L+G+K++ +D+HS+ AK VGISR+ AK++NYAR+YG+G A
Sbjct: 692 CCVGRGIAGATPFSNMLLAGRKADNSDLHSVVAKEVGISRDKAKVLNYARLYGSGVAHAA 751
Query: 643 RLLKQFNPEMSKSDAKSKARKMYTLTKGKKL----------------------------- 673
L Q M+ A S + K++ TKGK+
Sbjct: 752 EFLMQSG--MNSERALSVSNKLFATTKGKRFNFLKLNENYNDYFRWYIDNLCTSKMKTYY 809
Query: 674 -----------YRLKDGHL-----EELIKRVYSKYEAR---EVCSAYNTSVDKIFDKPQW 714
YR++ G L + L + V++K + EV + + + +I+D+
Sbjct: 810 LYANGSYFLPEYRIRQGKLTLNFEDWLYEGVWNKLREKGQDEVDFSKDWLIKQIYDECTE 869
Query: 715 Y----GGTESAMFNRLEEIATSLQPVTPFLNCRLSRALEPVSEDD-------SKFIQTRI 763
Y GG ES FN LE + +P TP LNC+L L P+ +D K+ ++ I
Sbjct: 870 YQLYTGGFESDTFNYLELTLNNPKPCTPVLNCQLGYCLTPLPKDVRDHEYFLKKYRRSII 929
Query: 764 NWVVQSGAVDFLHLMLVCMRWLV---SRDTRFVISIHDEIRYLVPDEEKYETALALHVTN 820
NWVVQS AVDFLHL++VCM+WL + RF +SIHDEIRY+VP E++Y ALAL ++N
Sbjct: 930 NWVVQSSAVDFLHLLIVCMKWLCEIYQIEARFALSIHDEIRYIVPAEDRYRCALALSLSN 989
Query: 821 LLTRAFCIKKLDMTDIPLSISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEI 880
+ RA +KL + ++P+S++FFS V+ID+VLRKE + C TPS G C I GE
Sbjct: 990 MYVRAMISQKLGIRELPMSVAFFSQVDIDRVLRKEVNLVCTTPS---GEC----IQPGEA 1042
Query: 881 LDIYQTIDKANGVI 894
LD+ + K G +
Sbjct: 1043 LDMSAILKKTGGTL 1056
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 86/195 (44%), Gaps = 53/195 (27%)
Query: 6 WTNVSSLNSLSEVYKLYCEG---KVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLAT 62
W ++ NSLS +++ C K L+K+ + FV+ +++I ++ +L TYCA D +A
Sbjct: 275 WRSLVCKNSLSALHEKLCGTTSLKPLNKSLQTFFVKEPIDEIRRSFQDLTTYCAYDVVAC 334
Query: 63 FEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLA 122
FE+ Q L+P F +RFPHPVT GMLE+ Y
Sbjct: 335 FELYQVLYPEFRKRFPHPVTWQGMLEIGNVY----------------------------- 365
Query: 123 GMLELSTAYLPVNNNWVKYFNESCQTFNDLN-------VEMKSLLMDKCDQACSLLHDDK 175
LPV NW K+F+ + N N V L++K ++
Sbjct: 366 ---------LPVTKNWRKFFDLNETRANHENKIAAIGVVYAAKELVEKLEKPIQ-----S 411
Query: 176 YKDSLWLWDQDWSVK 190
YK W+W DWS++
Sbjct: 412 YKHDPWMWSVDWSIR 426
>gi|156041228|ref|XP_001587600.1| hypothetical protein SS1G_11593 [Sclerotinia sclerotiorum 1980]
gi|154695976|gb|EDN95714.1| hypothetical protein SS1G_11593 [Sclerotinia sclerotiorum 1980 UF-70]
Length = 1146
Score = 334 bits (856), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 175/370 (47%), Positives = 231/370 (62%), Gaps = 40/370 (10%)
Query: 517 GVILPQLIVSGTLTRRAVEATWMTASNAVGERVGSELRAMIQAPDGYSIIGADVDSQELW 576
G ILPQ+I GT+TRRAVE TW+TASNA RVGSEL++MI+AP GY +GADVDS+ELW
Sbjct: 671 GYILPQVIPMGTVTRRAVENTWLTASNAKKNRVGSELKSMIKAPPGYCFVGADVDSEELW 730
Query: 577 IASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMHSITAKAVGISREHAKIINYARIYGA 636
IAS++GD+ K HG +G+MTL G K+ TD+HS TA +GI+R AK+ NY RIYGA
Sbjct: 731 IASLVGDAQF-KLHGGNAVGFMTLEGTKAAGTDLHSRTASILGITRNDAKVFNYGRIYGA 789
Query: 637 GERFAERLLKQFNPEMSKSDAKSKARKMYTLTKGKKLYRLKDGHLEELIKRVYSKYEARE 696
G +FA LL+QFNP +S+S+ A +Y TKG K
Sbjct: 790 GLKFASTLLRQFNPSLSESETSETAANLYKATKGVK------------------------ 825
Query: 697 VCSAYNTSVDKIFDKPQWYGGTESAMFNRLEEIATSLQPVTPFLNCRLSRALEPVSEDDS 756
T+ + P W GGTES +FN+LEE A +P TP L +++AL
Sbjct: 826 ------TNRKALHPGPFWRGGTESFVFNKLEEFAEQEKPRTPVLGAGITQALMARYVSKG 879
Query: 757 KFIQTRINWVVQSGAVDFLHLMLVCMRWLVSR---DTRFVISIHDEIRYLVPDEEKYETA 813
F+ +RINW +QS VD+LHL++V M +L+ R + R I++HDEIRYLV D++KY A
Sbjct: 880 GFMTSRINWAIQSSGVDYLHLLIVSMDYLIRRYNINARLAITVHDEIRYLVKDDDKYRAA 939
Query: 814 LALHVTNLLTRAFCIKKLDMTDIPLSISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGY 873
LAL V+NL TRA +++ + D+P S ++FS V+ID VLRKE D DC TPS+
Sbjct: 940 LALQVSNLWTRAMFSQQMGINDLPQSCAYFSAVDIDHVLRKEVDMDCITPSH------DT 993
Query: 874 GIPLGEILDI 883
IP GE +DI
Sbjct: 994 AIPPGESIDI 1003
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 111/495 (22%), Positives = 175/495 (35%), Gaps = 178/495 (35%)
Query: 4 ESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLATF 63
E W SS+NSL +V K + +DK +R+ F E E+I +L+ YCA D T
Sbjct: 272 ELWIGRSSVNSLRDVAKFHL-NVTIDKAERDAFGECGREEIMAKLDSLLDYCAADVDITH 330
Query: 64 EVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLAG 123
V + +F P F+E PHPV+ A
Sbjct: 331 RVYKRVF--------------------------------------PNFIETCPHPVSFAA 352
Query: 124 MLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDK--YKDSLW 181
+ LS+ LPVN +W Y + T+ L+ ++ L+ ++A + DDK + W
Sbjct: 353 LRHLSSVILPVNRSWESYVANAEATYLKLSDAVQERLLALKEKALEI-KDDKPTWSKDPW 411
Query: 182 LWDQDWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRRELVEKFK 241
L DWS +++K KK K +G+ K
Sbjct: 412 LRQLDWSGQEIKYLKKRTK-------------------DGD-----------------LK 435
Query: 242 PLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIPGPS 301
P Q + G P+WY+ L P +A GP
Sbjct: 436 PAKQK----------MAGKPKWYKDLY--PTAA------------------------GPI 459
Query: 302 LISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTDIKVPDAENIPLEQLKQLYNNI 361
+S +I P LL L W PL + +GW + +P+E+ +
Sbjct: 460 NLSVRTRIAPLLLRLAWDGYPLVWSDKYGWTF--------------RVPIEEA----HKY 501
Query: 362 TKQDNCEANVDNAQN-SLRDSVETNISFIDCSKSAKRLEVIANVLDKKKLAEASSTDTST 420
T++ E N A + +LRD DTS
Sbjct: 502 TEKQMQECNAFEAPDMALRD------------------------------------DTSA 525
Query: 421 DDADTPREIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEISRMLSY 480
+ K+PHKDG GNP+++ ++ F L+ AK ++++ SY
Sbjct: 526 ---------AYFKIPHKDGPLARCGNPMAKSYMQYFEKGILSSEFSYAKEALQMNASCSY 576
Query: 481 WRNNHERVKKQFVVW 495
W + R++ Q V+
Sbjct: 577 WISARRRIQSQMAVY 591
>gi|361124589|gb|EHK96670.1| putative DNA polymerase gamma, mitochondrial [Glarea lozoyensis
74030]
Length = 739
Score = 333 bits (854), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 186/468 (39%), Positives = 264/468 (56%), Gaps = 58/468 (12%)
Query: 427 REIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEISRMLSYWRNNHE 486
R + K+PHKDG NP+++ ++ F L+ AK +E++ SYW + +
Sbjct: 199 RSNAYFKVPHKDGPQARCANPMAKSYMAYFEKGILSSEFAYAKEALEMNASCSYWISARD 258
Query: 487 RVKKQFVVWLNKKDLPRRLVENIESEGRDYGVILPQLIVSGTLTRRAVEATWMTASNAVG 546
R+ Q VV+ + D + + + G ILPQ+I GT+TRRAVE TW+TASNA
Sbjct: 259 RIMSQMVVY--EGDGAKGSAHGKSTS--ETGYILPQVIPMGTVTRRAVENTWLTASNAKK 314
Query: 547 ERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSN 606
RVGSEL++M++AP GY +GADVDS+ELWIAS+IGD+ K HG +G+MTL G K+
Sbjct: 315 NRVGSELKSMVKAPPGYCFVGADVDSEELWIASLIGDAQF-KVHGGNAVGFMTLEGTKAA 373
Query: 607 ATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYT 666
TD+HS TA +GI+R AK+ NY RIYGAG +FA LL+QFNP +S+++ A +Y
Sbjct: 374 GTDLHSRTAGILGITRNDAKVFNYGRIYGAGLKFASTLLRQFNPSLSEAETTKVASNLYK 433
Query: 667 LTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQWYGGTESAMFNRL 726
TKG+K R + L K+ + W GGTES +FN+L
Sbjct: 434 ATKGQKTNR------KTLHKKAF------------------------WRGGTESFVFNKL 463
Query: 727 EEIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLVCMRWLV 786
EE A +P TP L ++ AL F+ +RINW +Q
Sbjct: 464 EEFAEQERPRTPVLGAGITEALMSRFVSTGGFMTSRINWAIQ-----------------F 506
Query: 787 SRDTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIPLSISFFSGV 846
+ D R I++HDEIRYLV +E+KY A+AL V+N+ TRA +++ + D+P + ++FS V
Sbjct: 507 NVDARLAITVHDEIRYLVREEDKYRAAMALQVSNIWTRAMFSQQVGINDLPQACAYFSAV 566
Query: 847 EIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKANGVI 894
+ID VLRKE D DC TPS+ IP GE +D+ + K N +
Sbjct: 567 DIDHVLRKEVDMDCITPSH------HTPIPHGESIDMSTLLTKVNATL 608
>gi|302410881|ref|XP_003003274.1| DNA polymerase gamma [Verticillium albo-atrum VaMs.102]
gi|261358298|gb|EEY20726.1| DNA polymerase gamma [Verticillium albo-atrum VaMs.102]
Length = 963
Score = 330 bits (847), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 243/808 (30%), Positives = 354/808 (43%), Gaps = 209/808 (25%)
Query: 3 DESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLAT 62
+E W SS+NSL +V K + + +DK R+ F + L+ YCA D T
Sbjct: 240 EELWVERSSVNSLRDVAKFHLD-VTIDKAIRDDFSTLDRAGVLAKLDELLDYCAADVAIT 298
Query: 63 FEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLA 122
V Q +FP FLE PHPV+ A
Sbjct: 299 HRVY--------------------------------------QIVFPNFLETCPHPVSFA 320
Query: 123 GMLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLL-HDDKYKDSLW 181
+ LS+ LPVN W Y + T+++LN + L+ ++A ++ + + + W
Sbjct: 321 ALRHLSSVILPVNETWNAYIANAEATYHELNDAVLERLVALAEKAVAIRDQSETWSNDPW 380
Query: 182 LWDQDWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRRELVEKFK 241
L DWS +++K+ K K E P R + K
Sbjct: 381 LNQLDWSGQEIKMVKGKKK-------NEPP----------------------RPAARQKK 411
Query: 242 PLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIPGPS 301
P G P WY+ L K DA P
Sbjct: 412 P----------------GMPRWYKDLFAK-----NDA---------------------PI 429
Query: 302 LISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTDIKVPDAENIPLEQLKQLYNNI 361
++ +I P LL L W PL + +GW + V + E K L +
Sbjct: 430 GLTVRTRIAPLLLKLAWDGHPLCWSDTYGWTFRVSRT-------------EASKYLNKQM 476
Query: 362 TKQDNCEANVDNAQNSLRDSVETNISFIDCSKSAKRLEVIANVLDKKKLAEASSTDTSTD 421
T+ D + V+ +LR E + F
Sbjct: 477 TQCDMADEKVE----ALRQDTE-GVYF--------------------------------- 498
Query: 422 DADTPREIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEISRMLSYW 481
KLPHKDG NP+++ +++ F + +L+ AK +E++ SYW
Sbjct: 499 -----------KLPHKDGPTARCANPMAKSYLSYFENGTLSSEYSYAKEALEMNASCSYW 547
Query: 482 RNNHERVKKQFVVWLNKKDLPRRLVENIESEGRDYGVILPQLIVSGTLTRRAVEATWMTA 541
+ +R+K Q VV+ ++D+ +E G ILPQ+I GT+TRRAVE TW+TA
Sbjct: 548 ISARDRIKSQMVVY--EEDVATEKLEGGMENKNTQGFILPQIIPMGTITRRAVENTWLTA 605
Query: 542 SNAVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLS 601
SNA RVGSEL+AM++AP GYS +GADVDSQELWIAS++GD+ K HG +G+MTL
Sbjct: 606 SNAKRNRVGSELKAMVKAPPGYSFVGADVDSQELWIASLVGDA-TFKLHGGNAIGFMTLE 664
Query: 602 GQKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKA 661
G K+ TD+HS TA +GI+R AK+ NY RIYGAG +FA +LL+QF+P +S+ + A
Sbjct: 665 GTKAAGTDLHSRTAGILGITRNDAKVFNYGRIYGAGLKFAAQLLRQFDPNLSEKETLETA 724
Query: 662 RKMYTLTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQWYGGTESA 721
K+Y TKG K T+ ++ +P W GGTES
Sbjct: 725 SKLYVNTKGTK------------------------------TNRKVLYKRPFWRGGTESF 754
Query: 722 MFNRLEEIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLVC 781
+FN+LEE A +P TP L ++ AL + ++ +RINW +QS VD+LHL++V
Sbjct: 755 VFNKLEEFAEQERPRTPVLGAGITEALMGRFINKGGYLTSRINWAIQSSGVDYLHLLIVT 814
Query: 782 MRWLVSRDTRFVISIHDEIRY---LVPD 806
+ S D ++ DE R +VPD
Sbjct: 815 IPHGESLDINALLDKGDEARLDPSIVPD 842
>gi|340381520|ref|XP_003389269.1| PREDICTED: DNA polymerase subunit gamma-1-like, partial [Amphimedon
queenslandica]
Length = 753
Score = 329 bits (843), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 172/381 (45%), Positives = 238/381 (62%), Gaps = 45/381 (11%)
Query: 481 WRNNHERVKKQFVVWLNKKDLPRRLVENIESEGRDYGVILPQLIVSGTLTRRAVEATWMT 540
W + QFVVW N++ + + + GVI+P++ VSGT+TRRAVE TW+T
Sbjct: 395 WNTFMQSASNQFVVWTNEESAS-------DHKRKAQGVIIPKVQVSGTVTRRAVEPTWLT 447
Query: 541 ASNAVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTL 600
ASNA ++GSE +A +QAP GY I+GADVDSQE+WIAS++GD++ G T GWM+L
Sbjct: 448 ASNAKINKIGSEQKAFVQAPPGYCIVGADVDSQEVWIASLLGDNHFTGLQGGTAFGWMSL 507
Query: 601 SGQKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSK 660
G KS TD+HS TA+ +GI+R+HAK+ NY+RIYG+G++FA LLKQFNP +S + +K
Sbjct: 508 QGNKSEGTDIHSKTAQTIGITRDHAKVFNYSRIYGSGKQFASTLLKQFNPLLSDEEIDAK 567
Query: 661 ARKMYTLTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVD-------------- 706
+ +Y TKG I+R+ +A+ + S+ ++
Sbjct: 568 SNSLYESTKG--------------IRRMLLSKKAQAIASSAGITIHSDGSINISDWVKEY 613
Query: 707 KIFDKPQ-----WYGGTESAMFNRLEEIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQT 761
K F WYGGTES MFN+LE IA S QP TP LNC +S AL+ + + KF+ +
Sbjct: 614 KSFPPKSRVGTYWYGGTESHMFNKLESIAKSPQPRTPVLNCLISTALQKENVKE-KFMTS 672
Query: 762 RINWVVQSGAVDFLHLMLVCMRWLVSR----DTRFVISIHDEIRYLVPDEEKYETALALH 817
RINWVVQS AVD+LHL+LV ++WL++ R ISIHDE+RY+V +E+KY+ +LAL
Sbjct: 673 RINWVVQSSAVDYLHLLLVAVKWLMAHYNITGGRLCISIHDEVRYIVREEDKYKMSLALQ 732
Query: 818 VTNLLTRAFCIKKLDMTDIPL 838
V N+ TRA L M D+PL
Sbjct: 733 VANIWTRAMFAPSLGMNDLPL 753
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 49/95 (51%), Positives = 71/95 (74%)
Query: 1 MTDESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTL 60
++ E W VSS NSL+++Y+LYC G+ +DK+ IF++G+ DI +N+ +LM YC +D
Sbjct: 296 LSKEKWMEVSSPNSLADMYQLYCGGEKIDKSLSEIFIKGNSSDIRDNFQDLMGYCYQDVK 355
Query: 61 ATFEVIQALFPLFLERFPHPVTLAGMLELSTAYLP 95
T+E+++ L+PLFL PHPVTLAGMLE+ST YLP
Sbjct: 356 CTYEILKVLYPLFLHHCPHPVTLAGMLEMSTMYLP 390
>gi|357605858|gb|EHJ64805.1| DNA polymerase subunit gamma 1, mitochondrial [Danaus plexippus]
Length = 696
Score = 282 bits (721), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 175/487 (35%), Positives = 250/487 (51%), Gaps = 94/487 (19%)
Query: 3 DESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLAT 62
D+ W VSSLN LS+V++LYC G +DK R++FVEG LED++NN+ +LM YCA D +A
Sbjct: 277 DDEWREVSSLNGLSDVHRLYC-GVAIDKQTRDVFVEGCLEDVQNNFQDLMKYCAGDVIA- 334
Query: 63 FEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLA 122
T V++AL PLFLERFPHPVT A
Sbjct: 335 -------------------------------------THNVLRALLPLFLERFPHPVTFA 357
Query: 123 GMLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDKYKDSLWL 182
GMLEL +AYLPVN+NW +Y + + F DL +E + +L K D+AC ++ ++ YK+ W+
Sbjct: 358 GMLELGSAYLPVNSNWSQYLDSADTVFEDLKLESQQILSSKADEACRMMENEGYKEDPWM 417
Query: 183 WDQDWSVKD-------------LKLKKKANKTLSVDQETEE--PEEFYEINKNGEDQTED 227
WDQDWSV+ ++ KK A++ ++ E +E+ + K E T D
Sbjct: 418 WDQDWSVQKLKLKKNATKKKDTIESKKPASEDVNRISSKFELLSDEYVDSLKTNEKVTHD 477
Query: 228 EFVKRRRELVEKFKPLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHD 287
L +KFK L D LPV +L GYP WYRKLC KP D D
Sbjct: 478 -----FENLNKKFKYLYDLGDLLPVKRPFLAGYPAWYRKLCTKP-GKDPD---------- 521
Query: 288 GISDTSEAWIPGPSLISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTDIKVPDAE 347
W G + I+TSMQITPKLL L+W+ PLH ++ GWG+LVPYS I DA+
Sbjct: 522 --------WRAGANNITTSMQITPKLLRLSWEGYPLHHLQSEGWGFLVPYSRHI-AEDAK 572
Query: 348 N--IPLEQLKQLYNNIT-KQDNCEANVDNAQNSLRDSVETNISFIDCSKSAKRLEVIANV 404
+PLE++ ++ +T K D E+ + ++ + + + ++ K + +AN
Sbjct: 573 EPLVPLEKILEICPLMTSKADYVESELHMLPQNVEEDLSRRAYY---ARKKKEEQAVANQ 629
Query: 405 LDKKKLAEASSTDTSTDDADTPREIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGV 464
+ F++LPHKDG VGNPL+RDF+N FS N L+
Sbjct: 630 YHGLGVWCGVQIQGCCH---------FLRLPHKDGPKYKVGNPLARDFLNMFSQNVLSAQ 680
Query: 465 DIGAKRI 471
A+++
Sbjct: 681 GNEAEKV 687
>gi|116207922|ref|XP_001229770.1| hypothetical protein CHGG_03254 [Chaetomium globosum CBS 148.51]
gi|88183851|gb|EAQ91319.1| hypothetical protein CHGG_03254 [Chaetomium globosum CBS 148.51]
Length = 1082
Score = 282 bits (721), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 172/433 (39%), Positives = 243/433 (56%), Gaps = 51/433 (11%)
Query: 431 FIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEISRMLSYWRNNHERVKK 490
+ KLPHKDG PL++ +++ F +L+ AK +E++ SYW + ER+K
Sbjct: 587 YFKLPHKDGPTARCATPLAKSYLSYFEKGTLSSEYSYAKEALEMNASCSYWISARERIKS 646
Query: 491 QFVVWLNKKDLPRRLVENIESEGRDY------GVILPQLIVSGTLTRRAVEATWMTASNA 544
Q VV+ ++ LP ++ ++ G ILPQ+I GT+TRRAVE TW+TASNA
Sbjct: 647 QLVVYQDQ--LPSTAGKSAQTSEESTSGEPVGGFILPQIIPMGTITRRAVENTWLTASNA 704
Query: 545 VGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQK 604
RVGSEL+AM++AP GY +GADVDS+ELWIASVIGDS + HG +G+MTL G K
Sbjct: 705 KKNRVGSELKAMVRAPPGYVFVGADVDSEELWIASVIGDS-TFRIHGGNAIGFMTLEGTK 763
Query: 605 SNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKM 664
+ TD+HS TA +GI+R AKI NY RIYGAG +FA +LL+QFNP +S+++ A K+
Sbjct: 764 AAGTDLHSRTASILGITRNDAKIFNYGRIYGAGLKFAAQLLRQFNPSLSETETLQIATKL 823
Query: 665 YTLTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQWYGGTESAMFN 724
Y TKG K R L KR + W GGTES +FN
Sbjct: 824 YATTKGTKTNR------RVLHKRTF------------------------WRGGTESFVFN 853
Query: 725 RLEEIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLVCMRW 784
+LEE A P TP L ++ AL ++ +RINW +QS VD+LHL++V M +
Sbjct: 854 KLEEFAEQEHPRTPVLGAGITEALNSRFIRKGGYLTSRINWAIQSSGVDYLHLLVVAMDY 913
Query: 785 LVSRDTRFVISI-HDEIRYLVPDEEKYETALALHVTNLLTRAFCIK-KLDMT-DIPL-SI 840
T +S H +R+ + ++A + +T+LL + + DMT D+ L +I
Sbjct: 914 -----THPALSTWHARLRH---NPSTTKSATCIDITDLLAKGDLARLAQDMTADLKLDAI 965
Query: 841 SFFSGVEIDKVLR 853
+ V I + LR
Sbjct: 966 PYTPRVPIMQQLR 978
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/344 (23%), Positives = 126/344 (36%), Gaps = 111/344 (32%)
Query: 3 DESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLAT 62
+E W SS+NSL +V K + + +DK RN F +++ L+TYCA D T
Sbjct: 330 EELWVERSSINSLRDVAKFHLD-VTIDKELRNSFGGLDRDEVVERLDELLTYCAADVAIT 388
Query: 63 FEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLA 122
V Q +FP FL PHPV+ A
Sbjct: 389 HRVY--------------------------------------QVVFPNFLRVCPHPVSFA 410
Query: 123 GMLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHD-DKYKDSLW 181
+ LS+ LPVN +W Y + T+++L+ ++ L +A + D DK+ + W
Sbjct: 411 ALRHLSSVILPVNKSWDAYIKNAEATYHNLSNGVQERLELLAGKALEIKDDPDKWSNDPW 470
Query: 182 LWDQDWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRRELVEKFK 241
+ DWS +++K+ NG+ + +
Sbjct: 471 MKQLDWSGQEIKM------------------------VNGKKKGD--------------P 492
Query: 242 PLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIPGPS 301
P + +LP G P+WY+ G+ TS A P
Sbjct: 493 PRPAARQKLP-------GKPKWYK----------------------GLFATSTA----PM 519
Query: 302 LISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTDIKVPD 345
++ +ITP LL L W PL + HGW + VP K D
Sbjct: 520 NLTVRTRITPLLLRLAWDGYPLFWSDKHGWTFRVPRGDAKKYTD 563
>gi|268533370|ref|XP_002631813.1| Hypothetical protein CBG21034 [Caenorhabditis briggsae]
Length = 854
Score = 276 bits (707), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 188/632 (29%), Positives = 314/632 (49%), Gaps = 108/632 (17%)
Query: 303 ISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVP----YSTDIKVPDAENIPLEQLKQLY 358
I+ Q+ P + + PL R GWG+LVP ++ PD I ++ +
Sbjct: 233 IALKSQLIPGIFGFVFGPFPLFKTRSKGWGFLVPNWKAVEKALEDPDVSFIEMKTDAK-E 291
Query: 359 NNITKQDNCEANVDNAQNSLRDSVETNISFIDCSKSAKRLEVIANVLDKKKLAEASSTDT 418
+ + K+ + + QN++ + E IS D
Sbjct: 292 DAVKKRFPLRSFYETVQNNVYEFGEYPIS----------------------------EDR 323
Query: 419 STDDADTPREIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGA--KRIIEISR 476
+ D + F ++ H GE NVG+PL++ F + L + +++ +
Sbjct: 324 KGFEMDEAGLVRFYQMDHPTGEG-NVGDPLTKHFAKDLKEQVLRPTRYEQLFRVVLDSIQ 382
Query: 477 MLSYWRNNHERVKKQFVVWLNKKDLPRRLVENIESEGRDYGVILPQLIVSGTLTRRAVEA 536
+W + +R +++ +W +K ++ +E G I ++ +GT++RR+V
Sbjct: 383 TTQFWTSYSDRYRQEVAIWYPEKSWKSGEIDMME------GAIAAAVVPAGTVSRRSVHK 436
Query: 537 TWMTASN-AVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAK----EH- 590
W+T +N + G +G+ ++AM+QAP G+ ++GADVDSQE W+A++ GD+ K EH
Sbjct: 437 LWVTLTNQSTGHVIGTGIKAMVQAPKGFKLVGADVDSQEQWLAALYGDASAEKRLPLEHR 496
Query: 591 --GATPLGWMTLSGQKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQF 648
G T M L+G KS+ TD+HS+ A + ISR HAK++NYAR+YG+GE A + L +
Sbjct: 497 VPGKTAFSNMMLAGSKSDNTDLHSVVANQLKISRNHAKVLNYARLYGSGETHAGKHLMRV 556
Query: 649 NPEMSKSDAKSKARKMYTLTKGK---------KLYRLKDGHLEEL-----------IKRV 688
M ++DA++ A +++ LTKG+ K+ L D ++EE+ I V
Sbjct: 557 G-GMKQTDAEATASQLFKLTKGETAKYMKVDSKMNCLVDRYIEEMQKNPDESKILTIDGV 615
Query: 689 Y------SKYEAREV----------------CSAYNTSVDKIFDKPQ-----WYGGTESA 721
Y S++ V S ++ + I++ P + GG ES+
Sbjct: 616 YYLPSYSSQFSYETVGFEDWLLSKYSDLLNDGSHHDNLIYSIYENPAEPRKLFVGGYESS 675
Query: 722 MFNRLEEIATSLQPVTPFLNCRLSRALEPVSED-------DSKFIQTRINWVVQSGAVDF 774
FN LE A + TP L C+++ +L + E D K+ ++ +NW+VQS AVDF
Sbjct: 676 TFNFLETSAAAHDLRTPILGCQIADSLGKLPEGTPDSAFFDRKYKRSVMNWIVQSSAVDF 735
Query: 775 LHLMLVCMRWLVSR---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKL 831
LHL+L+ M+WL D RFVISIHDE+RY+ +++ ALAL ++NLL RA+ ++
Sbjct: 736 LHLLLISMQWLCDTYQIDARFVISIHDEVRYMCAEKDAPRLALALQLSNLLVRAYISHRV 795
Query: 832 DMTDIPLSISFFSGVEIDKVLRKESDNDCKTP 863
+ +P +++FFS V+ D VLRKE D + P
Sbjct: 796 GICQLPNTVAFFSQVDCDTVLRKEVDTESINP 827
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 62/119 (52%), Gaps = 17/119 (14%)
Query: 5 SWTNVSSLNSLSEVYKLYCEGKVLDKTD---------RNIFVEGSLEDIENNWHNLMTYC 55
+W + S NSL V+ + K ++K R+ FV+ +E I + LMTYC
Sbjct: 37 TWKDRVSKNSLLAVHNHFYPYKEVEKPKIDDESKDKLRSAFVKEPIETIRAKFQKLMTYC 96
Query: 56 AKDTLATFEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLER 114
A+D + E+ L+P F++RFPHP TL+GML + YLP I + + +F ER
Sbjct: 97 ARDNILCAEIYYGLWPEFVKRFPHPATLSGMLNMGNVYLP--------INSYWKIFYER 147
>gi|7510239|pir||T31635 hypothetical protein Y57A10A.m - Caenorhabditis elegans
Length = 1171
Score = 266 bits (681), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 192/630 (30%), Positives = 309/630 (49%), Gaps = 103/630 (16%)
Query: 303 ISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTDIKVPDAENIPLEQLKQ--LYNN 360
I+ + P + + PL R GWG+LVP P+E+ Q ++
Sbjct: 551 IALKSHLIPAIFGFVFGPFPLFKTRSKGWGFLVPNWK----------PVEKALQDPNFHE 600
Query: 361 ITKQDNCEANVDNAQNSLRDSVETNISFIDCSKSAKRLEVIANVLDKKKLAEASSTDTST 420
I + + + + + LR ET V NV +L S D
Sbjct: 601 IDAKIDFKPDSAVKKFPLRSFYET---------------VQNNVYMLGELP--ISPDRKG 643
Query: 421 DDADTPREIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGA--KRIIEISRML 478
+ D + F +L H GE NVG+PL++ F + L +++ +
Sbjct: 644 FELDEAGLVRFYQLDHPSGEG-NVGDPLTKHFAKDLKELVLRPTRYEEYFDVVLDSIQTT 702
Query: 479 SYWRNNHERVKKQFVVWLNKKDLPRRLVENIESEGRDYGVILPQLIVSGTLTRRAVEATW 538
+W + +R + +W + R EN+E G I ++ +GT++RR+V W
Sbjct: 703 QFWTSYSDRYCSEVAIW--SPEATWRTAENLEMID---GAIAAAVVPAGTISRRSVHKLW 757
Query: 539 MTASN-AVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKE-------H 590
+T +N + G +G+ ++AM+QAP GY ++GADVDSQE W+A++ GD+ K
Sbjct: 758 VTLTNQSTGHVIGTGIKAMVQAPAGYRLVGADVDSQEQWLAALYGDASAEKRLPLEKRVA 817
Query: 591 GATPLGWMTLSGQKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNP 650
G T M L+G KS+ TD+HS+ A + ISR HAK++NYAR+YG+GE A + L +
Sbjct: 818 GKTAFSNMMLAGSKSDNTDLHSVVASQLKISRNHAKVLNYARLYGSGETHAGKHLMRVG- 876
Query: 651 EMSKSDAKSKARKMYTLTKGKKLYRLK---------DGHLEELIKR-------------- 687
+ +S+A+S A +++ LTKG +K D ++EE+++
Sbjct: 877 GLKQSEAESTASQLFKLTKGDVAKYMKVDVRMNCVVDKYIEEMVENSDVCKILTIDGIYY 936
Query: 688 --VYSKYEARE-------VCSAYNTSVD----------KIFDKPQ-----WYGGTESAMF 723
Y+ A E + S Y++ ++ I++ P + GG ES+ F
Sbjct: 937 MPAYTSQFASETVRFEDWLLSHYSSLLNGSSEPDSLIYSIYENPDEPRRLFVGGYESSTF 996
Query: 724 NRLEEIATSLQPVTPFLNCRLSRALEPVSED-------DSKFIQTRINWVVQSGAVDFLH 776
N LE A + TP L C+++ +L + E D K+ ++ +NW+VQS AVDFLH
Sbjct: 997 NFLETSAAAHDLRTPILGCQIADSLGKLPEGTPDSAYFDRKYKRSVMNWIVQSSAVDFLH 1056
Query: 777 LMLVCMRWLVSR---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDM 833
L+LV M+WL D RFVISIHDE+RY+ + + ALAL ++NLL RA+ +++ +
Sbjct: 1057 LLLVSMQWLCDTYKIDARFVISIHDEVRYMCKEPDAPRLALALQLSNLLVRAYISQRVGI 1116
Query: 834 TDIPLSISFFSGVEIDKVLRKESDNDCKTP 863
+P +++FFS V+ D VLRKE D + P
Sbjct: 1117 CQLPNTVAFFSQVDCDTVLRKEVDTESINP 1146
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 54/97 (55%), Gaps = 6/97 (6%)
Query: 5 SWTNVSSLNSLSEVYKLYCEGKVLD------KTDRNIFVEGSLEDIENNWHNLMTYCAKD 58
+W S NSL V+ K ++ KT R FV+ +E I ++ LM+YCA+D
Sbjct: 263 AWKGRVSKNSLVAVHDHLYPDKAINAEGFSKKTMRASFVKDPIEQIREDFQPLMSYCARD 322
Query: 59 TLATFEVIQALFPLFLERFPHPVTLAGMLELSTAYLP 95
+ E+ L+P F++RFPHP TL+GML + YLP
Sbjct: 323 NILCAEIYFRLWPEFIKRFPHPATLSGMLNMGNVYLP 359
>gi|17537597|ref|NP_496592.1| Protein POLG-1 [Caenorhabditis elegans]
gi|6433820|emb|CAB60771.1| Protein POLG-1 [Caenorhabditis elegans]
Length = 1072
Score = 266 bits (680), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 192/630 (30%), Positives = 309/630 (49%), Gaps = 103/630 (16%)
Query: 303 ISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTDIKVPDAENIPLEQLKQ--LYNN 360
I+ + P + + PL R GWG+LVP P+E+ Q ++
Sbjct: 452 IALKSHLIPAIFGFVFGPFPLFKTRSKGWGFLVPNWK----------PVEKALQDPNFHE 501
Query: 361 ITKQDNCEANVDNAQNSLRDSVETNISFIDCSKSAKRLEVIANVLDKKKLAEASSTDTST 420
I + + + + + LR ET V NV +L S D
Sbjct: 502 IDAKIDFKPDSAVKKFPLRSFYET---------------VQNNVYMLGELP--ISPDRKG 544
Query: 421 DDADTPREIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGA--KRIIEISRML 478
+ D + F +L H GE NVG+PL++ F + L +++ +
Sbjct: 545 FELDEAGLVRFYQLDHPSGEG-NVGDPLTKHFAKDLKELVLRPTRYEEYFDVVLDSIQTT 603
Query: 479 SYWRNNHERVKKQFVVWLNKKDLPRRLVENIESEGRDYGVILPQLIVSGTLTRRAVEATW 538
+W + +R + +W + R EN+E G I ++ +GT++RR+V W
Sbjct: 604 QFWTSYSDRYCSEVAIW--SPEATWRTAENLEMID---GAIAAAVVPAGTISRRSVHKLW 658
Query: 539 MTASN-AVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKE-------H 590
+T +N + G +G+ ++AM+QAP GY ++GADVDSQE W+A++ GD+ K
Sbjct: 659 VTLTNQSTGHVIGTGIKAMVQAPAGYRLVGADVDSQEQWLAALYGDASAEKRLPLEKRVA 718
Query: 591 GATPLGWMTLSGQKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNP 650
G T M L+G KS+ TD+HS+ A + ISR HAK++NYAR+YG+GE A + L +
Sbjct: 719 GKTAFSNMMLAGSKSDNTDLHSVVASQLKISRNHAKVLNYARLYGSGETHAGKHLMRVG- 777
Query: 651 EMSKSDAKSKARKMYTLTKGKKLYRLK---------DGHLEELIKR-------------- 687
+ +S+A+S A +++ LTKG +K D ++EE+++
Sbjct: 778 GLKQSEAESTASQLFKLTKGDVAKYMKVDVRMNCVVDKYIEEMVENSDVCKILTIDGIYY 837
Query: 688 --VYSKYEARE-------VCSAYNTSVD----------KIFDKPQ-----WYGGTESAMF 723
Y+ A E + S Y++ ++ I++ P + GG ES+ F
Sbjct: 838 MPAYTSQFASETVRFEDWLLSHYSSLLNGSSEPDSLIYSIYENPDEPRRLFVGGYESSTF 897
Query: 724 NRLEEIATSLQPVTPFLNCRLSRALEPVSED-------DSKFIQTRINWVVQSGAVDFLH 776
N LE A + TP L C+++ +L + E D K+ ++ +NW+VQS AVDFLH
Sbjct: 898 NFLETSAAAHDLRTPILGCQIADSLGKLPEGTPDSAYFDRKYKRSVMNWIVQSSAVDFLH 957
Query: 777 LMLVCMRWLVSR---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDM 833
L+LV M+WL D RFVISIHDE+RY+ + + ALAL ++NLL RA+ +++ +
Sbjct: 958 LLLVSMQWLCDTYKIDARFVISIHDEVRYMCKEPDAPRLALALQLSNLLVRAYISQRVGI 1017
Query: 834 TDIPLSISFFSGVEIDKVLRKESDNDCKTP 863
+P +++FFS V+ D VLRKE D + P
Sbjct: 1018 CQLPNTVAFFSQVDCDTVLRKEVDTESINP 1047
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 79/195 (40%), Gaps = 49/195 (25%)
Query: 5 SWTNVSSLNSLSEVYKLYCEGKVLD------KTDRNIFVEGSLEDIENNWHNLMTYCAKD 58
+W S NSL V+ K ++ KT R FV+ +E I ++ LM+YCA+D
Sbjct: 263 AWKGRVSKNSLVAVHDHLYPDKAINAEGFSKKTMRASFVKDPIEQIREDFQPLMSYCARD 322
Query: 59 TLATFEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHP 118
+ E+ L+P F++RFPHP TL+GML + Y
Sbjct: 323 NILCAEIYFRLWPEFIKRFPHPATLSGMLNMGNVY------------------------- 357
Query: 119 VTLAGMLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDD---- 174
LP+N+ W ++ ++ QT +++ L D+
Sbjct: 358 -------------LPINSYWKMFYEKNVQTCEQKKTAATRKIIESARLVAKRLDDEGEEI 404
Query: 175 -KYKDSLWLWDQDWS 188
K+ +W+W DW+
Sbjct: 405 GPEKNDVWMWHHDWT 419
>gi|341888481|gb|EGT44416.1| hypothetical protein CAEBREN_01221 [Caenorhabditis brenneri]
Length = 581
Score = 266 bits (679), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 172/506 (33%), Positives = 275/506 (54%), Gaps = 83/506 (16%)
Query: 429 IGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGV------DIGAKRIIEISRMLSYWR 482
+ F ++ H GE NVG+PL++ F + L D+ +++ + +W
Sbjct: 62 VRFYQMDHPTGEG-NVGDPLTKHFAKDLKEMVLKPTRYEKYFDV----VLDSIQTTQFWT 116
Query: 483 NNHERVKKQFVVWLNKKDLPRRLVENIESEGRDYGVILPQLIVSGTLTRRAVEATWMTAS 542
+ R +++ +W + + ++ ++ EG ++P +GT++RR+V W+T +
Sbjct: 117 SYSNRYQQEVAIW--RPETTWKVGDSDMMEGSIAAAVVP----AGTVSRRSVHKLWVTLT 170
Query: 543 N-AVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKE-------HGATP 594
N + G +G+ ++AM+Q+P GY ++GADVDSQE W+A++ GD+ K G T
Sbjct: 171 NQSTGHVIGTGIKAMVQSPKGYRLVGADVDSQEQWLAALYGDASAEKRLPLEKRVAGKTA 230
Query: 595 LGWMTLSGQKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSK 654
M L+G KS+ TD+HS+ AK + ISR HAK +NYAR+YG+GE A++ L + M +
Sbjct: 231 FSNMMLAGSKSDNTDLHSVVAKQLKISRNHAKTLNYARLYGSGESHAKKHLMRIGG-MKQ 289
Query: 655 SDAKSKARKMYTLTKG---------KKLYRLKDGHLEE-----------LIKRVY----- 689
SDA + A ++ LTKG +K+ L D ++E+ I VY
Sbjct: 290 SDADATASDLFKLTKGESSKFMKLDQKMNVLVDKYMEDTGINPDESKILTIDGVYYMPSY 349
Query: 690 -SKYEAREV------CSAY------NTSVDKIF----DKPQ-----WYGGTESAMFNRLE 727
S++ V S Y +T+ DK+F + P+ + GG ES+ FN LE
Sbjct: 350 TSQFSYETVRFENWLLSHYTSILPSSTNPDKLFLSLYENPEDTRRLFVGGYESSTFNFLE 409
Query: 728 EIATSLQPVTPFLNCRLSRALEPVSED-------DSKFIQTRINWVVQSGAVDFLHLMLV 780
A + TP L C+++ +L + E DSK+ ++ +NW+VQS AVDFLHL+LV
Sbjct: 410 TSAAAHDLRTPILGCQIADSLGKLPEGTPDAKYFDSKYKRSVMNWIVQSSAVDFLHLLLV 469
Query: 781 CMRWLVSR---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIP 837
M+WL D RFVISIHDE+RY+ +E+ ALAL ++NLL RAF +++ ++ +P
Sbjct: 470 SMQWLCDTYRIDARFVISIHDEVRYMCKEEDAPRLALALQLSNLLVRAFISQRVGISQLP 529
Query: 838 LSISFFSGVEIDKVLRKESDNDCKTP 863
+++FFS V+ D VLRKE D P
Sbjct: 530 NTVAFFSQVDCDTVLRKEVDTVSINP 555
>gi|308495624|ref|XP_003110000.1| hypothetical protein CRE_06484 [Caenorhabditis remanei]
gi|308244837|gb|EFO88789.1| hypothetical protein CRE_06484 [Caenorhabditis remanei]
Length = 1090
Score = 259 bits (663), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 196/651 (30%), Positives = 314/651 (48%), Gaps = 128/651 (19%)
Query: 303 ISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVP-YSTDIKVPDAENIPLEQLKQLYNNI 361
I+ Q+ P + + PL R GWG+LVP + K+ + + N+I
Sbjct: 453 IALKSQLIPAIFGFVFGPFPLFKTRTKGWGFLVPNWKAVEKILENPEV---------NSI 503
Query: 362 TKQDNCEANVDNAQNSLRDSVETNISFIDCSKSAKRLEVIANVLDKKKLAEASSTDTSTD 421
+ + + + Q LR+ ET V NV +L S D
Sbjct: 504 QLRVDAKEDAVRKQFPLRNFYET---------------VQNNVYMFGELP--ISQDRKGF 546
Query: 422 DADTPREIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGV---DIGAKRIIEISRML 478
+ D + F +L H GE NVG+PL++ F + L D+ + +++ +
Sbjct: 547 EMDEGGLVRFYQLDHPTGEG-NVGDPLTKHFAKDLKEQVLRPSRHEDLFSV-VLDSIQTT 604
Query: 479 SYWRNNHERVKKQFVVWLNKKDLPRRLVENIESEGRDYGVILPQLIVSGTLTRRAVEATW 538
+W + +R + + +W +K ++ EN EG ++P +GT++RR+V W
Sbjct: 605 QFWTSYSDRYRSEVAIWYPEKKW--KVGENEMMEGAIAAAVVP----AGTVSRRSVHKLW 658
Query: 539 MTASN-AVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKE-------H 590
+T +N + G +G+ ++AM+QAP+G+ ++GADVDSQE W+A++ GD+ K
Sbjct: 659 VTLTNQSTGHVIGTGIKAMVQAPEGFRLVGADVDSQEQWLAALYGDASAEKRLPLELRVP 718
Query: 591 GATPLGWMTLSGQKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNP 650
G T M L+G KS+ TD+HS+ A + ISR HAK++NYAR+YG+GE A + L +
Sbjct: 719 GKTAFSNMMLAGSKSDNTDLHSVVANQLKISRNHAKVLNYARLYGSGETHAGKHLMRIGG 778
Query: 651 EMSKSDAKSKARKMYTLTKGKKLYRLK---------DGHLEELIK-----------RVY- 689
M + DA++ A +++ LTKG+ +K D ++EE K VY
Sbjct: 779 -MKQIDAEATAAQLFKLTKGETAKYMKVDLKMNCFVDKYIEETAKDPDSSKILTIDGVYY 837
Query: 690 --------------------SKYEA----------REVCSAYNTSVDKIFDKPQWYGGTE 719
SKY + + S Y + D+ + + GG E
Sbjct: 838 MPSYSSQFSSETVEFENWFLSKYSSLFNLNESHQDNLIYSIYENAEDQ---RKLFVGGYE 894
Query: 720 SAMFNRLEEIATSLQPVTPFLNCRLSRALEPVSED-------DSKFIQTRINWV------ 766
S+ FN LE A + TP L C+++ +L + E D K+ ++ +NWV
Sbjct: 895 SSTFNFLETSAAAHDLRTPILGCQIADSLGKLPEGTPDSAYFDRKYKRSVMNWVSRKIKI 954
Query: 767 -----------VQSGAVDFLHLMLVCMRWLV---SRDTRFVISIHDEIRYLVPDEEKYET 812
VQS AVDFLHL+L+ M+WL D RFVISIHDE+RY+ +++
Sbjct: 955 SYNKFSKIIQIVQSSAVDFLHLLLISMQWLCDIYKIDARFVISIHDEVRYMCKEKDAPRL 1014
Query: 813 ALALHVTNLLTRAFCIKKLDMTDIPLSISFFSGVEIDKVLRKESDNDCKTP 863
ALAL ++NLL RAF +++ + +P +++FFS V+ D VLRKE D + P
Sbjct: 1015 ALALQLSNLLVRAFISQRVGICQLPNTVAFFSQVDCDTVLRKEVDTESINP 1065
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 85/203 (41%), Gaps = 60/203 (29%)
Query: 5 SWTNVSSLNSLSEVYKLYCEGKVLDK---------TDRNIFVEGSLEDIENNWHNLMTYC 55
+W + S NSL V++ + + L K R+ FV+ +E+I + LMTYC
Sbjct: 261 TWKDRVSKNSLVAVHEHFYPFRKLQKHRDGDESKEKQRSAFVKEPIENIRLKFQKLMTYC 320
Query: 56 AKDTLATFEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERF 115
A+D + E+ L+P F++RFPHP TL+GML + Y
Sbjct: 321 ARDNILCAEIYFGLWPEFVKRFPHPATLSGMLNMGNVY---------------------- 358
Query: 116 PHPVTLAGMLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDK 175
LP+N+ W ++ ++ Q + E K+ K +A L+ +
Sbjct: 359 ----------------LPINSYWKMFYEKNVQ----ICAEKKTEATRKIVEAARLMASGE 398
Query: 176 YK---------DSLWLWDQDWSV 189
+W+W+QDWSV
Sbjct: 399 ESEEGEVGLADKDVWMWNQDWSV 421
>gi|268533178|ref|XP_002631717.1| Hypothetical protein CBG20918 [Caenorhabditis briggsae]
Length = 1022
Score = 253 bits (646), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 179/606 (29%), Positives = 300/606 (49%), Gaps = 108/606 (17%)
Query: 303 ISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVP----YSTDIKVPDAENIPLEQLKQLY 358
I+ Q+ P + + PL R GWG+LVP ++ PD I ++ +
Sbjct: 453 IALKSQLIPGIFGFVFGPFPLFKTRSKGWGFLVPNWKAVEKALEDPDVSFIEMKTDAK-E 511
Query: 359 NNITKQDNCEANVDNAQNSLRDSVETNISFIDCSKSAKRLEVIANVLDKKKLAEASSTDT 418
+ + K+ + + QN++ + E IS D+K
Sbjct: 512 DAVKKRFPLRSFYETVQNNVYEFGEYPIS-----------------EDRKGF-------- 546
Query: 419 STDDADTPREIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGA--KRIIEISR 476
D+A R F ++ H GE NVG+PL++ F + L + +++ +
Sbjct: 547 EMDEAGLVR---FYQMDHPTGEG-NVGDPLTKHFAKDLKEQVLRPTRYEQLFRVVLDSIQ 602
Query: 477 MLSYWRNNHERVKKQFVVWLNKKDLPRRLVENIESEGRDYGVILPQLIVSGTLTRRAVEA 536
+W + +R +++ +W +K ++ +E G I ++ +GT++RR+V
Sbjct: 603 TTQFWTSYSDRYRQEVAIWYPEKSWKSGEIDMME------GAIAAAVVPAGTVSRRSVHK 656
Query: 537 TWMTASN-AVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAK----EH- 590
W+T +N + G +G+ ++AM+QAP G+ ++GADVDSQE W+A++ GD+ K EH
Sbjct: 657 LWVTLTNQSTGHVIGTGIKAMVQAPKGFKLVGADVDSQEQWLAALYGDASAEKRLPLEHR 716
Query: 591 --GATPLGWMTLSGQKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQF 648
G T M L+G KS+ TD+HS+ A + ISR HAK++NYAR+YG+GE A + L +
Sbjct: 717 VPGKTAFSNMMLAGSKSDNTDLHSVVANQLKISRNHAKVLNYARLYGSGETHAGKHLMRV 776
Query: 649 NPEMSKSDAKSKARKMYTLTKGK---------KLYRLKDGHLEEL-----------IKRV 688
M ++DA++ A +++ LTKG+ K+ L D ++EE+ I V
Sbjct: 777 G-GMKQTDAEATASQLFKLTKGETAKYMKVDSKMNCLVDRYIEEMQKNPDESKILTIDGV 835
Query: 689 Y------SKYEAREV----------------CSAYNTSVDKIFDKPQ-----WYGGTESA 721
Y S++ V S ++ + I++ P + GG ES+
Sbjct: 836 YYLPSYSSQFSYETVGFEDWLLSKYSDLLNDGSHHDNLIYSIYENPAEPRKLFVGGYESS 895
Query: 722 MFNRLEEIATSLQPVTPFLNCRLSRALEPVSED-------DSKFIQTRINWVVQSGAVDF 774
FN LE A + TP L C+++ +L + E D K+ ++ +NW+VQS AVDF
Sbjct: 896 TFNFLETSAAAHDLRTPILGCQIADSLGKLPEGTPDSAFFDRKYKRSVMNWIVQSSAVDF 955
Query: 775 LHLMLVCMRWLVSR---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKL 831
LHL+L+ M+WL D RFVISIHDE+RY+ +++ ALAL ++NLL RA+ ++
Sbjct: 956 LHLLLISMQWLCDTYQIDARFVISIHDEVRYMCAEKDAPRLALALQLSNLLVRAYISHRV 1015
Query: 832 DMTDIP 837
+ +P
Sbjct: 1016 GICQLP 1021
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 62/119 (52%), Gaps = 17/119 (14%)
Query: 5 SWTNVSSLNSLSEVYKLYCEGKVLDKTD---------RNIFVEGSLEDIENNWHNLMTYC 55
+W + S NSL V+ + K ++K R+ FV+ +E I + LMTYC
Sbjct: 257 TWKDRVSKNSLLAVHNHFYPYKEVEKPKIDDESKDKLRSAFVKEPIETIRAKFQKLMTYC 316
Query: 56 AKDTLATFEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLER 114
A+D + E+ L+P F++RFPHP TL+GML + YLP I + + +F ER
Sbjct: 317 ARDNILCAEIYYGLWPEFVKRFPHPATLSGMLNMGNVYLP--------INSYWKIFYER 367
>gi|170577048|ref|XP_001893862.1| DNA polymerase I family protein [Brugia malayi]
gi|158599875|gb|EDP37305.1| DNA polymerase I family protein [Brugia malayi]
Length = 977
Score = 245 bits (625), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 203/680 (29%), Positives = 312/680 (45%), Gaps = 147/680 (21%)
Query: 234 RELVEKFKPLMQTKDRLP----VNSSYLIG--YPEWYRKLCVKPHSADKDAVSKQELIHD 287
RELVEK + +Q+ P V+ S G +P WY L + + L+H
Sbjct: 400 RELVEKLEEPIQSYKNDPWMWSVDWSSRKGEEFPIWYESL-----------LRTRSLLHM 448
Query: 288 GISDTSEAWIPGPSLISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTDIKVPDAE 347
+ + S+A + ++ P+L L W PLH+ GWG+LVP I + D
Sbjct: 449 PVEELSQA------DVKLKSRVVPRLFGLCWGPYPLHYKTDKGWGFLVPKDRRIALSDVP 502
Query: 348 NIPLEQLKQLYNNITKQDNCEANVDNAQNSLRDSVETNISFIDCSKSAKRLEVIANVLDK 407
+ + + + +A + ++ ++ NI+ E I +VL
Sbjct: 503 EM---------DEVVLRRGVKATI--PVKAILSLIQQNIA-----------EGIGDVLLT 540
Query: 408 KKLAEASSTDTSTDDADTPREIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIG 467
+ +++ F KLPH +GEH NVG+P+S+ F + + L V
Sbjct: 541 HSHSSSTTISI----------FNFHKLPHPNGEHDNVGDPISKAFQLEIDEGVLWPVRY- 589
Query: 468 AKRIIEISRMLS---YWRNNHERVKKQFVVWLNKKDLPRRLVENIESEGRDYGVILPQLI 524
K ++ R + +W N +R ++Q +WL+ E D G I P +I
Sbjct: 590 KKEFSDLYRARNTTRFWNNYRDRFQEQVTIWLD--------------ENGDEGAIAPSII 635
Query: 525 VSGTLTRRAVEATWMTASNAVGER-VGSELRAMIQAPDGYSIIGADVDSQELWIASVIGD 583
+GT+TRRAV W+TA N ++ +G+ L++M++ P+ + I+GADVDSQE WIA+++GD
Sbjct: 636 PAGTVTRRAVHKLWLTAINPKDDQMIGTNLKSMVECPEDWHIVGADVDSQEQWIAAMLGD 695
Query: 584 SYCAK-EHGATPLGWMTLSGQKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAE 642
K G TP M L+G KS+ +D+HS+ AK VGISR+ AK++NYAR+YG+G A
Sbjct: 696 CCVGKGTAGVTPFSNMLLAGSKSDNSDLHSVIAKEVGISRDKAKVLNYARLYGSGIVHAA 755
Query: 643 RLLKQFNPEMSKSDAKSKARKMYTLTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYN 702
L Q M+ + A + + K++ TKGK+ LK L E Y ++ +C +
Sbjct: 756 EFLIQSG--MNATKALNVSNKLFATTKGKRFNFLK---LNESYND-YFRWYIDNICPS-K 808
Query: 703 TSVDKIFDKPQWYGGTESAMFNRLEEIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTR 762
D ++ GT R+ + +L +L + L +D+
Sbjct: 809 MKADYVYA-----NGTYFLPEYRIRQGKLTLN-FEDWLYESVWNKLRENGQDE------- 855
Query: 763 INWVVQSGAVDFLHLMLVCMRWLV---SRDTRFVISIHDEIRYLVPDEEKYETALALHVT 819
VVQS AVDFLHL++VCM+WL S RF +SIHDE
Sbjct: 856 ---VVQSSAVDFLHLLIVCMKWLCEIYSIKARFALSIHDE-------------------- 892
Query: 820 NLLTRAFCIKKLDMTDIPLSISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGE 879
S++FFS V+ID+VLRKE + C TPS G C IP GE
Sbjct: 893 -------------------SVAFFSQVDIDRVLRKEVNLVCTTPS---GEC----IPPGE 926
Query: 880 ILDIYQTIDKANGVIGTFKN 899
LD+ + K G + N
Sbjct: 927 ALDMNAILVKTGGTLKKVAN 946
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 87/196 (44%), Gaps = 54/196 (27%)
Query: 6 WTNVSSLNSLSEVYKLYCEG----KVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLA 61
W ++ NSLS +++ C K L+K+ + FV+ +++I ++ +L TYCA D +A
Sbjct: 275 WRSLVCKNSLSALHEKLCGTTNSLKPLNKSLQTFFVKEPIDEIRRSFQDLTTYCAYDVVA 334
Query: 62 TFEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTL 121
FE+ Q L+P F +RFPHPVT GMLE+ Y
Sbjct: 335 CFELYQVLYPEFTKRFPHPVTWQGMLEIGNVY---------------------------- 366
Query: 122 AGMLELSTAYLPVNNNWVKYFNESCQTFNDLN-------VEMKSLLMDKCDQACSLLHDD 174
LPV NW K+F+ + N+ N V L++K ++
Sbjct: 367 ----------LPVTKNWRKFFDNNETRANNENKIAAIGVVYAARELVEKLEEPIQ----- 411
Query: 175 KYKDSLWLWDQDWSVK 190
YK+ W+W DWS +
Sbjct: 412 SYKNDPWMWSVDWSSR 427
>gi|339253182|ref|XP_003371814.1| putative ubiquitin--protein ligase [Trichinella spiralis]
gi|316967875|gb|EFV52241.1| putative ubiquitin--protein ligase [Trichinella spiralis]
Length = 1284
Score = 239 bits (611), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 142/317 (44%), Positives = 184/317 (58%), Gaps = 39/317 (12%)
Query: 469 KRIIEISRMLSYWRNNHERVKKQFVVWLNKKDLPRRLVENIESEGRDYGVILPQLIVSGT 528
+ I + M SYW+NN +R+ Q VV L + ++ + E VILP+++ GT
Sbjct: 681 RLITAFNSMCSYWKNNRDRIVPQMVVSLTRFQDACKITPDDE-----ISVILPRVVCVGT 735
Query: 529 LTRRAVEATWMTASN-----------------AV--GERVGSELRAMIQAPDGYSIIGAD 569
+TRR+VE TWMT SN AV +R+GSELR +I AP GY +GAD
Sbjct: 736 VTRRSVEPTWMTVSNPEVFFLLISILQLYFIYAVLQPDRIGSELRGLIIAPKGYCFVGAD 795
Query: 570 VDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMHSITAKAVGISREHAKIIN 629
VDSQELWIA++ DSY K HG+TP+ W+ L G KS TD HS+TAK +G+SR AKI+N
Sbjct: 796 VDSQELWIAALFSDSYGVKIHGSTPISWILLKGDKSKGTDQHSLTAKEMGVSRSQAKILN 855
Query: 630 YARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKGKKLYRLKDGHLEELIKRVY 689
Y RIYGAG FA RLLK F P +S D K ARK+Y TKG +Y L EL ++
Sbjct: 856 YGRIYGAGRPFATRLLKTFLPTLSDEDVKKMARKLYRKTKGSAVY------LRELTEK-- 907
Query: 690 SKYEAREVCSAYNTSV---DKIFDKPQWYGG--TESAMFNRLEEIATSLQPVTPFLNCRL 744
+ + + +N + D F K G +ES +FN LE+IA S QP TP L CR+
Sbjct: 908 GRTAVKLLKKEHNVDIMLYDGEFIKESDIGELLSESDLFNALEKIARSPQPRTPILGCRI 967
Query: 745 SRALEP--VSEDDSKFI 759
SRALEP V+ED F
Sbjct: 968 SRALEPDVVNEDSVAFF 984
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 45/74 (60%), Gaps = 2/74 (2%)
Query: 6 WTNVSSLNSLSEVYKLYC--EGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLATF 63
W +V+S NSL EV++ +C G + K R++F+ G++ DI + LMTYCA D ATF
Sbjct: 329 WLDVTSTNSLIEVHRFHCPNSGLFVAKELRDLFLVGTMSDIREKFQLLMTYCATDVAATF 388
Query: 64 EVIQALFPLFLERF 77
EV L F +R+
Sbjct: 389 EVFSMLMDQFWQRY 402
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/39 (61%), Positives = 29/39 (74%)
Query: 839 SISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPL 877
S++FFS ++ID VLRKE D DC TPSNP+GL Y IP
Sbjct: 980 SVAFFSKIDIDHVLRKEVDVDCTTPSNPFGLTACYNIPF 1018
Score = 48.5 bits (114), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 67/166 (40%), Gaps = 36/166 (21%)
Query: 175 KYKDSLWLWDQDWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRR 234
+YKD WLW+++W V K+ + + ++T E T E+ KR
Sbjct: 497 RYKDDPWLWNENWDVG-----KEPKRITTFKRKTTE--------------TALEYAKRVW 537
Query: 235 ELVEKFKPLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADK-DAVSKQELIHDGISDTS 293
+ K + RLP WYR L ++ D V I + IS
Sbjct: 538 DESMKKQNKKSMNRRLPA----------WYRSLLQNNMQLERWDEVDVFNAILE-ISSNE 586
Query: 294 EAWIPGPSLISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYST 339
A +S M++ KLL + W PL+F +GWGYLVP T
Sbjct: 587 NA-----INLSAQMRLAFKLLRVHWNGYPLYFSDAYGWGYLVPGRT 627
>gi|422936214|ref|YP_007006067.1| DNA polymerase [Cyanophage S-TIM5]
gi|374716494|gb|AEZ65654.1| DNA polymerase [Cyanophage S-TIM5]
Length = 894
Score = 235 bits (600), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 137/460 (29%), Positives = 226/460 (49%), Gaps = 51/460 (11%)
Query: 431 FIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEISRMLSYWRNNHERVKK 490
FI++PH GE NVG LS+D+ + F L+ AK +I+++ +SYW + RV++
Sbjct: 483 FIRVPHPKGEGENVGGVLSKDYADDFETGMLSSDLPQAKELIKLAINVSYWTSVRSRVRE 542
Query: 491 QFVVWLNKKDLPRRLVENIESEGRDYGVILPQLIVSGTLTRRAVEATWMTASNAVGERVG 550
Q+V +N G+ + +I+P + T T RA E W+T + +++G
Sbjct: 543 QYVSKVNN------------PLGKKFNLIVPATVPHNTSTNRAGENLWLTVPDPKYDKIG 590
Query: 551 SELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDM 610
SE++ +QAPDG+ + +D D+QE +AS+ DSY K G+T L+G K N TDM
Sbjct: 591 SEIKTRVQAPDGWVFVESDFDAQEAVVASIFADSY-HKVAGSTQFSHAILAGSKDNGTDM 649
Query: 611 HSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKG 670
HS+TAKA+GISR AK NY +YG G + +++ N + A +K+ + KG
Sbjct: 650 HSMTAKAIGISRAVAKGCNYGMLYGCGAKTLANTIRKGNKSIPMKQAVDMGKKLIEIKKG 709
Query: 671 KKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQWYGGTESAMFNRLEEIA 730
+K YR + ELI GG++S +N + +IA
Sbjct: 710 RKAYR----GMRELI------------------------------GGSDSYAYNEMAKIA 735
Query: 731 TSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLVCMRWLV---S 787
P+ P ++S A P S D F R NW +QS LH + M WL+
Sbjct: 736 CEKTPINPLSGTKMSTAFRPSSVGDD-FWTMRNNWCIQSTGSAMLHAFMAAMEWLIKDHG 794
Query: 788 RDTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIPLSISFFSGVE 847
+ +F +S+HD I Y+ P EE + A V + A+ + ++P++ ++ S +E
Sbjct: 795 LNAKFNMSVHDSILYMCPKEEAEKVAALFQVAHAWCWAWMRYNYGIYELPVANAWLSSIE 854
Query: 848 IDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTI 887
ID + RK +D T S G+ + + +++ +++ +
Sbjct: 855 IDHIFRKAADASTNTVSQQKKENDGHSVTIKDLIPVFENL 894
Score = 46.2 bits (108), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 47/99 (47%), Gaps = 5/99 (5%)
Query: 2 TDESWTNVSSLNSLSEVYKLYCEGKVL----DKTDRNIFV-EGSLEDIENNWHNLMTYCA 56
D W + SLN L + Y +C+ + DK R++FV ++E I +L Y
Sbjct: 248 ADPIWADKGSLNGLVDCYNFHCQPMIPLQPEDKKIRDVFVVSETMEQICELRDDLTQYAL 307
Query: 57 KDTLATFEVIQALFPLFLERFPHPVTLAGMLELSTAYLP 95
KD T E+ L +L+ P TL G +S+A+LP
Sbjct: 308 KDAEITQELYSILILKYLQNNPSLTTLLGHFGISSAFLP 346
>gi|345319400|ref|XP_003430139.1| PREDICTED: DNA polymerase subunit gamma-1-like, partial
[Ornithorhynchus anatinus]
Length = 196
Score = 229 bits (584), Expect = 6e-57, Method: Composition-based stats.
Identities = 106/170 (62%), Positives = 134/170 (78%), Gaps = 1/170 (0%)
Query: 501 LPRRLVENIESEGRDYGVILPQLIVSGTLTRRAVEATWMTASNAVGERVGSELRAMIQAP 560
L + + + + EGR YG ILPQ++ +GT+TRRAVE TW+TASNA +RVGSEL+AM+QAP
Sbjct: 7 LKKAELTDYDEEGR-YGAILPQVVTAGTITRRAVEPTWLTASNAREDRVGSELKAMVQAP 65
Query: 561 DGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMHSITAKAVGI 620
GY ++GADVDSQELWIA+V+GD++ A HG+T GWMTL G+KS+ TD+HS TA VGI
Sbjct: 66 PGYVLVGADVDSQELWIAAVLGDAHFAGMHGSTAFGWMTLQGKKSSGTDLHSKTATTVGI 125
Query: 621 SREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKG 670
SREHAK+ NY RIYGAG FAERLL QFN ++ +A KAR+MY +TKG
Sbjct: 126 SREHAKVFNYGRIYGAGRPFAERLLMQFNHRLTPEEAAEKARQMYAVTKG 175
>gi|313230839|emb|CBY08237.1| unnamed protein product [Oikopleura dioica]
Length = 866
Score = 215 bits (547), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 154/468 (32%), Positives = 231/468 (49%), Gaps = 60/468 (12%)
Query: 441 HLNVGNPLSRDFINKFSDNSLAG-----VDIGA---KRIIEISRMLSYWRNNHERVKKQF 492
H G + +K+S N +AG + G K I+E++ SYWR ER K
Sbjct: 443 HDKAGQKVGMLMTSKYSKNIIAGHLATKYEFGKNIIKDIMEVNTRGSYWRAYRERFKNLL 502
Query: 493 VVWLNKKDLPRRLVENIESEGRDYGVILPQLIVSGTLTRRAVEATWMTA--SNAVGERVG 550
++ + Y LP + GT+TRRA ++ WM A +++ +++G
Sbjct: 503 II----------------KDEDHYNWHLPMQVPHGTVTRRAKDSFWMVAQANDSNDDKLG 546
Query: 551 SELRAMIQAPDGYSIIGADVDSQELWIASVIGDSY-CAKEHGATPLGWMTLSGQKSNATD 609
++ Q + + + ADVDSQE+WIAS+ D Y E G T L +MTL+G KS TD
Sbjct: 547 MGAFSLAQLDEDHVYVSADVDSQEIWIASLFADMYKNLGEVGVTGLSYMTLNGSKSAGTD 606
Query: 610 MHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTK 669
+H+ITA VG+ R AKI+NYAR+Y G++ A LL + A +++ TK
Sbjct: 607 IHTITANQVGMDRNSAKILNYARLYLCGKQNALDLLG------PRDGAGKIVDELWRFTK 660
Query: 670 GKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQWYGGTESAMFNRLEEI 729
GK + L++ S+ + + N S D G ES +FN L
Sbjct: 661 GKSV----------LVRNPVSETGKKILSDGVNASHSLAED------GIESELFNYLMLT 704
Query: 730 ATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLVCMRWLVSR- 788
A QP TP L L L +++ TR NW++QS AVDFLHL L M +LV +
Sbjct: 705 AAEDQPTTPVLGGNLLMPL--LNQLAPSHTTTRCNWLIQSSAVDFLHLFLANMDFLVEKY 762
Query: 789 --DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIPLSISFFSGV 846
+ + +SIHD I+++ E+KY TALA + +L TRA+ K + +P +++FFS V
Sbjct: 763 GINAHYSLSIHDMIQFISSKEDKYRTALAFQLAHLYTRAYFSLKCGLPQLPQNVAFFSSV 822
Query: 847 EIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKANGVI 894
EID+ +RK+ D T + G E LDI + I+ NG +
Sbjct: 823 EIDRSMRKDKDISWNT------IFYGENPGPAESLDISRIIELTNGSL 864
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 60/90 (66%), Gaps = 1/90 (1%)
Query: 3 DESWTNVSSLNSLSEVYKLYCE-GKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLA 61
D W + SL++L++V++ Y + +DK RNIFV+G++EDI N H+LM Y D A
Sbjct: 212 DFQWLHHCSLSNLADVHRFYHKNAPPMDKEIRNIFVDGTIEDIHENLHDLMAYNILDVQA 271
Query: 62 TFEVIQALFPLFLERFPHPVTLAGMLELST 91
T EV A FPL+L R+P+PV L GML++ +
Sbjct: 272 TAEVFAATFPLYLARYPNPVNLFGMLKMGS 301
>gi|313214576|emb|CBY40909.1| unnamed protein product [Oikopleura dioica]
Length = 856
Score = 212 bits (540), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 153/468 (32%), Positives = 229/468 (48%), Gaps = 70/468 (14%)
Query: 441 HLNVGNPLSRDFINKFSDNSLAG-----VDIGAK---RIIEISRMLSYWRNNHERVKKQF 492
H G + +K+S N +AG + G K I+E++ SYWR ER K
Sbjct: 443 HDKAGQKVGMLMTSKYSKNIIAGHLATKYEFGKKIIKDIMEVNTRGSYWRAYRERFKNLL 502
Query: 493 VVWLNKKDLPRRLVENIESEGRDYGVILPQLIVSGTLTRRAVEATWMTA--SNAVGERVG 550
++ + Y LP + GT+TRRA ++ WM A +++ +++G
Sbjct: 503 II----------------KDEDHYNWHLPMQVPHGTVTRRAKDSFWMVAQANDSNDDKLG 546
Query: 551 SELRAMIQAPDGYSIIGADVDSQELWIASVIGDSY-CAKEHGATPLGWMTLSGQKSNATD 609
++ Q + + + ADVDSQE+WIAS+ D Y E G T L +MTL+G KS TD
Sbjct: 547 MGAFSLAQLDEDHVYVSADVDSQEIWIASLFADMYKNLGEVGVTGLSYMTLNGSKSAGTD 606
Query: 610 MHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTK 669
+H+ITA VG+ R AKI+NYAR+Y G++ A LL + + A +++ TK
Sbjct: 607 IHTITANQVGMDRNSAKILNYARLYLCGKQNALDLL------VPRDGAGKIVDELWRFTK 660
Query: 670 GKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQWYGGTESAMFNRLEEI 729
GK + L + E K++ S G ES +FN L
Sbjct: 661 GKSV--LVRNPVSETGKKILSD------------------------DGIESELFNYLMLT 694
Query: 730 ATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLVCMRWLVSR- 788
A QP TP L L L +++ TR NW++QS AVDFLHL L M +LV +
Sbjct: 695 AAEDQPTTPVLGGNLLMPL--LNQLAPSHTTTRCNWLIQSSAVDFLHLFLANMDFLVEKY 752
Query: 789 --DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIPLSISFFSGV 846
+ + +SIHD I+++ E+KY TALA + +L TRA+ K + +P +++FFS V
Sbjct: 753 GINAHYSLSIHDMIQFISSKEDKYRTALAFQLAHLYTRAYFSLKCGLPQLPQNVAFFSSV 812
Query: 847 EIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKANGVI 894
EID+ +RK+ D T + G E LDI + I+ NG +
Sbjct: 813 EIDRSMRKDKDISWNT------IFYGENPGPAESLDISRIIELTNGSL 854
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 60/90 (66%), Gaps = 1/90 (1%)
Query: 3 DESWTNVSSLNSLSEVYKLYCE-GKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLA 61
D W + SL++L++V++ Y + +DK RNIFV+G++EDI N H+LM Y D A
Sbjct: 212 DFQWLHHCSLSNLADVHRFYHKNAPPMDKEIRNIFVDGTIEDIHENLHDLMAYNILDVQA 271
Query: 62 TFEVIQALFPLFLERFPHPVTLAGMLELST 91
T EV A FPL+L R+P+PV L GML++ +
Sbjct: 272 TAEVFGATFPLYLARYPNPVNLFGMLKMGS 301
>gi|343160583|emb|CAY85467.1| DNA polymerase gamma [Acaryochloris phage A-HIS2]
Length = 959
Score = 208 bits (530), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 167/604 (27%), Positives = 263/604 (43%), Gaps = 132/604 (21%)
Query: 303 ISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTDIKVPDAENIPLEQLKQLYNNIT 362
I+ Q P +L +TW +P+ I+ GW +P D K
Sbjct: 425 ITAKSQKAPYVLRMTWGDVPMVHIKNAGW--CIPLDVDDK-------------------G 463
Query: 363 KQDNCEANVDNAQNSLRDSVETNISFIDCSKSAKRLEVIANVLDKKKLAEASSTDTSTDD 422
K N N LR ++ ++ + KK + T D
Sbjct: 464 KPKN--------PNGLR-----------------KVLLVDRAIKKKTKGYTEARITKNDT 498
Query: 423 ADTPREIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEISRMLSYWR 482
D P G K+PHK G + NVG+PL++D+I+ F + ++G + A ++E + ++SYW
Sbjct: 499 VD-PGWYG--KIPHKKGGNNNVGSPLAKDYISSFENGHMSGSE-DAIGVLEKAALISYWT 554
Query: 483 NNHERVKKQFVVWLNKKDLPRRLVENIESEGRDYGVILPQLIVSGTLTRRAVEATWMTAS 542
+ RVK+Q R N+ +I+PQ GTLTRRAVE+ W+T +
Sbjct: 555 SCRSRVKQQITC--------RDHDNNV--------IIIPQWECHGTLTRRAVESLWLTTT 598
Query: 543 NAVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSG 602
++ ++GSEL+AMI+ P GY +GAD +SQE+ A +GDS A G TP+G + + G
Sbjct: 599 SSKINKLGSELKAMIRPPKGYLFMGADFNSQEMTYAGRLGDS-IAGILGGTPIGVLVICG 657
Query: 603 QKSNATDMH---------SITAK------------------AVGISREHAKIINYARIYG 635
K++ TD H S+ A+ + GI R+ AK N+A +YG
Sbjct: 658 NKADKTDAHNQLKSYLNNSLIARRGKDHSTVLLDADGNLALSDGILRDEAKQPNFAILYG 717
Query: 636 AGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKGKKLYRLKDGHLEELIKRVYSKYEAR 695
+G + K E D + A + L KG K + +
Sbjct: 718 SGVKGLTGTFKLARKEWPDEDCRFLAEQSILLRKGTKRDNGRGARV-------------- 763
Query: 696 EVCSAYNTSVDKIFDKPQWYGGTESAMFNRLEEIATSLQPVTPFLNCRLSRALEP-VSED 754
W GGT+S FN +E A S P T L LS AL P V +
Sbjct: 764 ------------------WCGGTDSEAFNAMEATANSRVPRTAMLGSMLSTALRPAVVQR 805
Query: 755 DSKFIQTRINWVVQSGAVDFLHLMLVCMRWLVSR---DTRFVISIHDEIRYLVPDEEKYE 811
D ++ +R NW +QS D H ++V WL + D+RF+ S HDE+ +
Sbjct: 806 D--YMTSRCNWAIQSSGQDLTHSLVVAYTWLTQKYKVDSRFIFSYHDEVLTIARHNAVLR 863
Query: 812 TALALHVTNLLTRAFCIKKLDMTDIPLSISFFSGVEIDKVLRKESDNDCKTPSNPYGLCK 871
+ L++ +L + C +L++ D+P + ++F + +D RKE + TPS+ L
Sbjct: 864 ASQCLNLAHLWVWSLCSFRLNLGDVPANSAWFPDINVDLCFRKEVNIKNLTPSSDEELPD 923
Query: 872 GYGI 875
G+ +
Sbjct: 924 GFSL 927
Score = 43.1 bits (100), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 73/195 (37%), Gaps = 49/195 (25%)
Query: 6 WTNVSSLNSLSEVYKLYCEGKVL----------DKTDRNIFVEGSLEDIENNWHNLMTYC 55
W N S +L + Y +C G DK RNIFV+
Sbjct: 246 WLNHGSPKNLVDCYNFHCFGSTQTTHPERARKEDKEIRNIFVD----------------- 288
Query: 56 AKDTLATFEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERF 115
A+ P + R + EL + D T + AL+P +
Sbjct: 289 ------------AVSPAVIAR--------RLPELVDYMISDVWRTHRLAAALYPKYRIAN 328
Query: 116 PHPVTLAGMLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDD- 174
P VTLA ++ + ++ LPV ++W + N++ +N ++ E+ L + DD
Sbjct: 329 PSNVTLAAVVIMGSSLLPVADHWHDWVNQTDYRYNLISKEITDTLTATAKKIAHAYKDDP 388
Query: 175 KYKDS-LWLWDQDWS 188
+Y S WL DW+
Sbjct: 389 EYTSSDPWLKHLDWT 403
>gi|324506474|gb|ADY42763.1| DNA polymerase subunit gamma-1, partial [Ascaris suum]
Length = 790
Score = 194 bits (492), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 128/375 (34%), Positives = 195/375 (52%), Gaps = 69/375 (18%)
Query: 308 QITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTDIKVPDAENIPLEQLKQLYNNITKQDNC 367
++ P+L L W PLHF GWG+LVP + DI DN
Sbjct: 474 RVIPRLFGLCWGPYPLHFKADKGWGFLVPRA-DI-----------------------DNA 509
Query: 368 EANVDNAQNSLRDSVETNI---SFIDCSKSAKRLEVIANVLDKKKLAEASSTDTSTDDAD 424
E + ++ SLR E +I + +D E IAN + + L E + + + D
Sbjct: 510 ETIAEVSRASLRRGEEVDIPNRAILDVIN-----ENIANGVGEVLLGEPACSIGAFD--- 561
Query: 425 TPREIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEISRMLS----- 479
F KLPH G + NVG+PL++DF + + G+ + I E S +++
Sbjct: 562 ------FHKLPHPKGGNANVGDPLAKDFHIEIEE----GILRATRYIDEFSAIVACKKTT 611
Query: 480 -YWRNNHERVKKQFVVWLNKKDLPRRLVENIESEGRDYGVILPQLIVSGTLTRRAVEATW 538
+W N R +Q VWL++ EG + G I P +I +GT+TRRAV W
Sbjct: 612 RFWGNYRARFNEQVTVWLDE-------------EGNE-GAIAPSVIPAGTVTRRAVHKLW 657
Query: 539 MTASNAV-GERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKE-HGATPLG 596
+TA N E +G+ L++M++ +G++++GADVDSQE WIA+++GD K GATP
Sbjct: 658 LTAINPKDNEMIGTGLKSMVECSEGWNLVGADVDSQEQWIAALLGDCAVGKHTAGATPFS 717
Query: 597 WMTLSGQKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSD 656
M L+G K++ +D+HS+ AK VGISR+ AK++NYAR+YG+G A LKQ ++
Sbjct: 718 NMLLAGNKADHSDLHSVVAKEVGISRDKAKVLNYARLYGSGLNHAVEFLKQSG--LADEQ 775
Query: 657 AKSKARKMYTLTKGK 671
A + K++ TKG+
Sbjct: 776 ALRISEKLFATTKGR 790
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 100/211 (47%), Gaps = 54/211 (25%)
Query: 4 ESWTNVSSLNSLSEVYKLYCEGK---VLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTL 60
+ W NSL+ +++ C K ++ K+ ++ FV +E+I +N+ +L+ YCA+D L
Sbjct: 287 DDWKARVCKNSLAALHEKLCSQKSKLIVKKSMQSFFVNEPIEEIRDNFQDLVQYCAEDVL 346
Query: 61 ATFEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVT 120
A E+ QAL+P F++RFPHP+T GMLE+S Y
Sbjct: 347 ACLELYQALYPEFVKRFPHPITWQGMLEMSAVY--------------------------- 379
Query: 121 LAGMLELSTAYLPVNNNWVKYFNESC--QTFNDLNVEMKSLLMDKCDQACSLLHDDKYKD 178
LP+ +NW ++F +SC + N+ + ++ +L + ++K+
Sbjct: 380 -----------LPITSNW-RHFYQSCEEEATNENRRAAQGVIRAAQHLTMTLEENQRFKE 427
Query: 179 SLWLWDQDWSVKD----------LKLKKKAN 199
W+W +DWS ++ LK KK AN
Sbjct: 428 DAWMWQEDWSNRNCTMPTWYTTLLKSKKLAN 458
>gi|343160581|emb|CAY85466.1| DNA polymerase gamma [Acaryochloris phage A-HIS1]
Length = 993
Score = 189 bits (481), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 165/598 (27%), Positives = 258/598 (43%), Gaps = 100/598 (16%)
Query: 296 WIPGPSLISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTDIKVPDAENIPLEQLK 355
W +S +I P LL L W +P+ IR GW IP+E L
Sbjct: 416 WRKAKKRVSAKSKIAPYLLRLRWNDVPMIHIRNAGWC----------------IPIENL- 458
Query: 356 QLYNNITKQDNCEANVDNAQNSLRDSVETNISFIDCSKSAKRLEVIANVLDKKKLAEASS 415
NA LR+ I ++ KR +D+K+ +
Sbjct: 459 -----------------NAGEGLRE-----IELVE-----KR------TIDEKEAKKKGY 485
Query: 416 TDTSTDDADTPREIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEIS 475
D+ + + ++PHK G NVG+PL++D+I F + S+ G + A +++ +
Sbjct: 486 RQILRTTTDSAKNGWYAQIPHKKGGENNVGSPLAKDYIFSFENGSMTGSET-AVEVLKKA 544
Query: 476 RMLSYWRNNHERVKKQFVVWLNKKDLPRRLVENIESEGRDYGVILPQLIVSGTLTRRAVE 535
+S+W + +RV KQ DL VI+P L V+G TRR V+
Sbjct: 545 ASISFWTSTRKRVFKQIARVSTDGDL----------------VIVPDLQVNGAGTRRPVD 588
Query: 536 ATWMTASNAVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPL 595
T++ A+++ ++GSEL+AMI P G + AD +SQE+ IA + DS A G TP+
Sbjct: 589 PTFLAATSSKATKLGSELKAMIIPPRGSVFVSADFNSQEMTIAGRMADSR-AGVLGGTPV 647
Query: 596 GWMTLSGQKSNATDMHSITAKAVGIS------REHAKIINYARIYGAGERFAERLLKQFN 649
G + +G K++ TD HS K + S +EH ++ + G + K+++
Sbjct: 648 GCLVQTGNKADGTDAHSQLMKYLNASLIERRGKEHETVVWRHKKNGNIVYQKPKNGKKYD 707
Query: 650 PEMSKSDAKSKARKMYTLTKG-----------KKLYRLKDGHLEELIKRVYSKYEAREVC 698
E S SD SK TL LY L K+ ++ E
Sbjct: 708 LEWSSSDRGSKDEYYITLLDAITRQESKQPNFAILYGSGKKGLTGTFKKERIEWAESECA 767
Query: 699 SAYNTSVD-------KIFDKPQWYGGTESAMFNRLEEIATSLQPVTPFLNCRLSRALEP- 750
S++ K+ W GGT+S FN +E A + P TP LN +S AL P
Sbjct: 768 FLAAKSLELRKGSKAKVGRARIWVGGTDSEAFNYMEAFANAPIPRTPTLNAAISTALRPN 827
Query: 751 -VSEDDSKFIQTRINWVVQSGAVDFLHLMLVCMRW---LVSRDTRFVISIHDEIRYLVPD 806
V D ++ +R N +Q D H +V + + + + RF IHDEI + P
Sbjct: 828 VVGRD---YMPSRCNSAIQGSGQDVSHANIVAYAYYCDVYNVNARFTYLIHDEIISIAPH 884
Query: 807 EEKYETALALHVTNLLTRAFCIKKLDMTDIPLSISFFSGVEIDKVLRKESDNDCKTPS 864
E + L++ +L T A +L++ D+P + ++F G ID V+RKE TPS
Sbjct: 885 NEALRASQCLNLGHLQTWALVSSRLNLGDVPANSAWFPGTNIDLVMRKEVKIANVTPS 942
Score = 41.2 bits (95), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 46/101 (45%), Gaps = 11/101 (10%)
Query: 5 SWTNVSSLNSLSEVYKLYCEGKV----------LDKTDRNIFVEG-SLEDIENNWHNLMT 53
+W + S +L + Y + G V DK R+IFVE S + I+ H ++
Sbjct: 244 AWYSAGSPKNLIDCYNFHLFGDVNSKHPNAAKKSDKKTRDIFVEAVSHKAIKRQLHECVS 303
Query: 54 YCAKDTLATFEVIQALFPLFLERFPHPVTLAGMLELSTAYL 94
Y D T + +AL+P + P VTLA L + ++ L
Sbjct: 304 YMLTDVYRTLLLTKALYPKYRLSCPSKVTLAAALLMGSSIL 344
>gi|326483586|gb|EGE07596.1| DNA polymerase gamma [Trichophyton equinum CBS 127.97]
Length = 1019
Score = 181 bits (459), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 102/256 (39%), Positives = 146/256 (57%), Gaps = 39/256 (15%)
Query: 639 RFAERLLKQFNPEMSKSDAKSKARKMYTLTKGKKLYRLKDGHLEELIKRVYSKYEAREVC 698
+FA LL+QFNP MS+++ K+ A K+Y TKG + R R+ S
Sbjct: 670 KFAATLLRQFNPSMSEAETKAVAAKLYKETKGTRTTR-----------RILS-------- 710
Query: 699 SAYNTSVDKIFDKPQWYGGTESAMFNRLEEIATSLQPVTPFLNCRLSRALEPVSEDDSKF 758
+ P GGTES +FN+LEE A +P TP L ++ AL + F
Sbjct: 711 -----------ENPFLRGGTESFVFNKLEEFAEQERPRTPVLGAGITEALMRRFINKGGF 759
Query: 759 IQTRINWVVQSGAVDFLHLMLVCMRWLVSR---DTRFVISIHDEIRYLVPDEEKYETALA 815
+ +RINW +QS VD+LHL+++ M +L+ R D R I++HDEIRY+V + +KY+ A+A
Sbjct: 760 MTSRINWAIQSSGVDYLHLLIISMDYLIRRFNLDARLAITVHDEIRYVVRETDKYKAAMA 819
Query: 816 LHVTNLLTRAFCIKKLDMTDIPLSISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGI 875
L V NL TRA +++ + D+P S +FFS V+ID VLRKE + DC TPS+P I
Sbjct: 820 LQVANLWTRAMFSQQMGIDDLPQSCAFFSAVDIDHVLRKEVNMDCVTPSHP------NKI 873
Query: 876 PLGEILDIYQTIDKAN 891
P GE LDI + + K +
Sbjct: 874 PHGESLDINELLSKGD 889
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/337 (24%), Positives = 125/337 (37%), Gaps = 115/337 (34%)
Query: 3 DESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLAT 62
+E W SS+NSL +V K +C +DK RN F E E I L+ YCA D T
Sbjct: 328 EELWVGRSSVNSLRDVAKFHC-NITIDKAQRNYFGELDREGINGQLDELLDYCAADVAIT 386
Query: 63 FEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLA 122
V + +FP FLE PHPV+ A + LS
Sbjct: 387 HRVYKKVFPNFLETCPHPVSFAALRHLS-------------------------------- 414
Query: 123 GMLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDK---YKDS 179
T LPVN W +Y + +T++ ++ L++ C+ A + DK Y++
Sbjct: 415 ------TVILPVNETWGEYLKSAEETYHHALDNVQKRLVELCENALKV--KDKPEIYQND 466
Query: 180 LWLWDQDWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRRELVEK 239
WL DWS +++++ K K G+
Sbjct: 467 PWLRQLDWSGQEIRMVKG--------------------KKKGD----------------- 489
Query: 240 FKPLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIPG 299
P + +LP G P+WY+ +L SD +
Sbjct: 490 -PPRPAARQKLP-------GMPKWYK-----------------DLFPTSKSDIN------ 518
Query: 300 PSLISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVP 336
I+ +I+P LL+L+W PL + HGW + VP
Sbjct: 519 ---ITVRTRISPILLNLSWDGFPLVWSDKHGWTFEVP 552
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 60/131 (45%), Gaps = 12/131 (9%)
Query: 427 REIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEISRMLSYWRNNHE 486
+E + KLPHKDG +PLS+ ++ F L+ AK +E++ SYW + +
Sbjct: 581 KEHVYFKLPHKDGPDARCASPLSKGYLQYFESGKLSSQFPLAKEALEMNASCSYWISARD 640
Query: 487 RVKKQFVVWLNKKDLPRRLVENIESEGRDYGVI--LPQLIVSGTLTRRAVEATWMTASNA 544
R+ Q VV+ KKDL E G G + L L + TL R+ + + A
Sbjct: 641 RITSQMVVY--KKDL--------EKTGLWQGAVAGLKSLKFAATLLRQFNPSMSEAETKA 690
Query: 545 VGERVGSELRA 555
V ++ E +
Sbjct: 691 VAAKLYKETKG 701
>gi|308495870|ref|XP_003110123.1| hypothetical protein CRE_06485 [Caenorhabditis remanei]
gi|308244960|gb|EFO88912.1| hypothetical protein CRE_06485 [Caenorhabditis remanei]
Length = 1337
Score = 181 bits (458), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 116/334 (34%), Positives = 176/334 (52%), Gaps = 65/334 (19%)
Query: 591 GATPLGWMTLSGQKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNP 650
G T M L+G KS+ TD+HS+ A + ISR HAK++NYAR+YG+GE A + L +
Sbjct: 983 GKTAFSNMMLAGSKSDNTDLHSVVANQLKISRNHAKVLNYARLYGSGETHAGKHLMRIG- 1041
Query: 651 EMSKSDAKSKARKMYTLTKGKKLYRLK---------DGHLEELIKR-----------VY- 689
M + DA++ A +++ LTKG+ +K D ++EE K VY
Sbjct: 1042 GMKQIDAEATAAQLFKLTKGETAKYMKVDLKMNCFVDKYIEETAKDPDSSKILTIDGVYY 1101
Query: 690 --------------------SKYEA----------REVCSAYNTSVDKIFDKPQWYGGTE 719
SKY + + S Y + D+ + + GG E
Sbjct: 1102 MPSYSSQFSSETVEFENWFLSKYSSLFNLNESHQDNLIYSIYENAEDQ---RKLFVGGYE 1158
Query: 720 SAMFNRLEEIATSLQPVTPFLNCRLSRALEPVSED-------DSKFIQTRINWVVQSGAV 772
S+ FN LE A + TP L C+++ +L + E D ++ ++ +NW+VQS AV
Sbjct: 1159 SSTFNFLETSAAAHDLRTPILGCQIADSLGKLPEGTPDSAYFDRRYKRSVMNWIVQSSAV 1218
Query: 773 DFLHLMLVCMRWLV---SRDTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIK 829
DFLHL+L+ M+WL D RFVISIHDE+RY+ +++ ALAL ++NLL RAF +
Sbjct: 1219 DFLHLLLISMQWLCDIYKIDARFVISIHDEVRYMCKEKDAPRLALALQLSNLLVRAFISQ 1278
Query: 830 KLDMTDIPLSISFFSGVEIDKVLRKESDNDCKTP 863
++ + +P +++FFS V+ D VLRKE D + P
Sbjct: 1279 RVGICQLPNTVAFFSQVDCDTVLRKEVDTESINP 1312
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 137/290 (47%), Gaps = 37/290 (12%)
Query: 303 ISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTDIKVPDAENIPLEQLKQLYNNIT 362
I+ Q+ P + + PL R GWG+LVP + E I LE + N+I
Sbjct: 116 IALKSQLIPAIFGFVFGPFPLFKTRTKGWGFLVPNWKAV-----EKI-LENPE--VNSIQ 167
Query: 363 KQDNCEANVDNAQNSLRDSVETNISFIDCSKSAKRLEVIANVLDKKKLAEASSTDTSTDD 422
+ + + + + LR+ ET V NV +L S D +
Sbjct: 168 LRVDAKDDAVRKEFPLRNFYET---------------VQNNVYMFGELP--ISPDKKGFE 210
Query: 423 ADTPREIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGV---DIGAKRIIEISRMLS 479
D + F +L H GE NVG+PL++ F + L D+ + +++ +
Sbjct: 211 MDEGGLVRFYQLDHPTGEG-NVGDPLTKHFAKDLKEQVLRPTRHEDLFSV-VLDSIQTTQ 268
Query: 480 YWRNNHERVKKQFVVWLNKKDLPRRLVENIESEGRDYGVILPQLIVSGTLTRRAVEATWM 539
+W + +R + + +W +K E +E G I ++ +GT++RR+V W+
Sbjct: 269 FWTSYSDRYRSEVAIWYPEKKWKAGENEMME------GAIAAAVVPAGTVSRRSVHKLWV 322
Query: 540 TASN-AVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAK 588
T +N + G +G+ ++AM+QAP+G+ ++GADVDSQE W+A++ GD+ K
Sbjct: 323 TLTNQSTGHVIGTGIKAMVQAPEGFRLVGADVDSQEQWLAALYGDASAEK 372
>gi|402581613|gb|EJW75561.1| hypothetical protein WUBG_13531 [Wuchereria bancrofti]
Length = 236
Score = 154 bits (390), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 90/213 (42%), Positives = 129/213 (60%), Gaps = 22/213 (10%)
Query: 674 YRLKDGHL-----EELIKRVYSKYEAR---EVCSAYNTSVDKIFDKPQWY----GGTESA 721
YR++ G L + L + V++K EV + + + +I+D Y GG ES
Sbjct: 17 YRIRQGKLTLNFEDWLYESVWNKLRENGQDEVNFSKDWLIRQIYDDCNEYQLYTGGFESD 76
Query: 722 MFNRLEEIATSLQPVTPFLNCRLSRALEPVSEDDS-------KFIQTRINWVVQSGAVDF 774
FN LE P TP L+C+L L P+ +D K+ ++ INWVVQS AVDF
Sbjct: 77 TFNYLELTLNDPNPRTPVLDCQLGYCLTPLPKDVKDHEYFLKKYRRSIINWVVQSSAVDF 136
Query: 775 LHLMLVCMRWLV---SRDTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKL 831
LHL++VCM+WL S + RF +SIHDEIRY+VP E++Y ALAL ++N+ RA +KL
Sbjct: 137 LHLLIVCMKWLCEIYSIEARFALSIHDEIRYIVPAEDRYRCALALSLSNMYVRAMISQKL 196
Query: 832 DMTDIPLSISFFSGVEIDKVLRKESDNDCKTPS 864
+ ++P+S++FFS V+ID+VLRKE + C TPS
Sbjct: 197 GIKELPMSVAFFSQVDIDRVLRKEVNLVCTTPS 229
>gi|260807963|ref|XP_002598777.1| hypothetical protein BRAFLDRAFT_120742 [Branchiostoma floridae]
gi|229284052|gb|EEN54789.1| hypothetical protein BRAFLDRAFT_120742 [Branchiostoma floridae]
Length = 644
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 89/274 (32%), Positives = 126/274 (45%), Gaps = 61/274 (22%)
Query: 119 VTLAGMLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDKYKD 178
+ GMLE+ YLPVN+NW +Y ++ TF +L EMK LM + AC L+H+D+Y++
Sbjct: 227 IKPGGMLEMGQCYLPVNSNWERYLRDAEDTFQELQKEMKLSLMHLANDACQLMHNDRYQE 286
Query: 179 SLWLWDQDWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRRE--- 235
WLW+ DWS ++L LKK+ + + D+ ED+ VK +R
Sbjct: 287 DPWLWELDWSTQELTLKKETTAKKKKIKVEK------------TDEGEDQKVKPKRRSTK 334
Query: 236 --------------------LVEKFKPLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSAD 275
++ + +++T DRLP ++ GYP WYR LC K
Sbjct: 335 KKKKKGKKEEAEEAEDQEETEEDRIQRVLETADRLPKIKRHMPGYPAWYRDLCPK----- 389
Query: 276 KDAVSKQELIHDGISDTSEAWIPGPSLISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLV 335
+ AW PGP+LIS ++TPKLL L W PLH+ GWGYLV
Sbjct: 390 ----------------VTGAWSPGPNLISAQARVTPKLLRLRWDGFPLHYEASQGWGYLV 433
Query: 336 PYSTD-----IKVPDAENIPLEQLKQLYNNITKQ 364
P TD K N P + + Y KQ
Sbjct: 434 PGRTDNMDGTDKQDGERNFPTKAVLDAYKEYLKQ 467
>gi|449688998|ref|XP_004211907.1| PREDICTED: DNA polymerase subunit gamma-1-like, partial [Hydra
magnipapillata]
Length = 101
Score = 122 bits (307), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 56/92 (60%), Positives = 71/92 (77%)
Query: 800 IRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIPLSISFFSGVEIDKVLRKESDND 859
+RY+V +++KY ALAL ++NLLTRA KL + D+P S++FFS VEIDKVLRKE DND
Sbjct: 1 VRYIVHEKDKYRAALALQISNLLTRALFAYKLQLNDLPQSVAFFSSVEIDKVLRKEVDND 60
Query: 860 CKTPSNPYGLCKGYGIPLGEILDIYQTIDKAN 891
C TPSNP+GL +GYGI GE LDIY+ + K N
Sbjct: 61 CVTPSNPHGLLRGYGITPGESLDIYELLRKTN 92
>gi|148675121|gb|EDL07068.1| polymerase (DNA directed), gamma, isoform CRA_d [Mus musculus]
Length = 133
Score = 120 bits (302), Expect = 3e-24, Method: Composition-based stats.
Identities = 60/94 (63%), Positives = 68/94 (72%), Gaps = 4/94 (4%)
Query: 714 WYGGTESAMFNRLEEIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVD 773
W GGTES MFN+LE IA S P TP L C +SRALEP S +FI +R+NWVVQS AVD
Sbjct: 39 WTGGTESEMFNKLESIAMSDTPRTPVLGCCISRALEP-SVVQGEFITSRVNWVVQSSAVD 97
Query: 774 FLHLMLVCMRWLVSR---DTRFVISIHDEIRYLV 804
+LHLMLV M+WL D RF ISIHDE+RYLV
Sbjct: 98 YLHLMLVAMKWLFEEFAIDGRFCISIHDEVRYLV 131
>gi|324517963|gb|ADY46967.1| DNA polymerase subunit gamma-1 [Ascaris suum]
Length = 87
Score = 97.1 bits (240), Expect = 4e-17, Method: Composition-based stats.
Identities = 47/86 (54%), Positives = 61/86 (70%), Gaps = 3/86 (3%)
Query: 777 LMLVCMRWLVSR---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDM 833
++LVCMRWL + RFVISIHDEIRYLV E++Y ALAL ++N+ RA +KL +
Sbjct: 1 MLLVCMRWLCDEYDINARFVISIHDEIRYLVASEDRYRCALALALSNMYVRATISQKLGI 60
Query: 834 TDIPLSISFFSGVEIDKVLRKESDND 859
+PLS++FFS V+ID VLRK S D
Sbjct: 61 HQLPLSVAFFSQVDIDHVLRKRSKPD 86
>gi|449689125|ref|XP_002154376.2| PREDICTED: DNA polymerase subunit gamma-1-like, partial [Hydra
magnipapillata]
Length = 427
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/90 (47%), Positives = 61/90 (67%), Gaps = 1/90 (1%)
Query: 6 WTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLATFEV 65
W +V ++NSL +VY+ YC K +DK+ R+ FV GSL+DI N+ + YCA D +T V
Sbjct: 298 WMDVGAMNSLVKVYEFYC-NKSIDKSSRDYFVTGSLQDIYENFQECVRYCAVDVQSTHAV 356
Query: 66 IQALFPLFLERFPHPVTLAGMLELSTAYLP 95
+++P+F PHPVTL GMLE+ T+YLP
Sbjct: 357 FTSVWPMFCFHAPHPVTLLGMLEMGTSYLP 386
>gi|402584886|gb|EJW78827.1| DNA polymerase I, partial [Wuchereria bancrofti]
Length = 470
Score = 85.1 bits (209), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 87/195 (44%), Gaps = 53/195 (27%)
Query: 6 WTNVSSLNSLSEVYKLYCEG---KVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLAT 62
W ++ NSLS +++ C K L+K+ + FV+ +++I ++ +L TYCA D +A
Sbjct: 137 WRSLVCKNSLSALHEKLCGTNSLKSLNKSLQTFFVKEPIDEIRRSFQDLTTYCAYDVVAC 196
Query: 63 FEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLA 122
FE+ Q L+P F +RFPHPVT GMLE+ Y
Sbjct: 197 FELYQVLYPEFTKRFPHPVTWQGMLEIGNVY----------------------------- 227
Query: 123 GMLELSTAYLPVNNNWVKYFNESCQTFNDLN-------VEMKSLLMDKCDQACSLLHDDK 175
LPV NW K+F+ + N+ N V L++K ++
Sbjct: 228 ---------LPVTKNWRKFFDSNETRANNQNKIAAIGVVYTARELVEKLEKPIQ-----S 273
Query: 176 YKDSLWLWDQDWSVK 190
YK+ W+W DWS +
Sbjct: 274 YKNDPWMWSVDWSSR 288
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 95/225 (42%), Gaps = 55/225 (24%)
Query: 234 RELVEKFKPLMQTKDRLP----VNSSYLIG--YPEWYRKLCVKPHSADKDAVSKQELIHD 287
RELVEK + +Q+ P V+ S G +P WY L + + L+H
Sbjct: 261 RELVEKLEKPIQSYKNDPWMWSVDWSSRKGEKFPIWYESL-----------LRTRNLLHM 309
Query: 288 GISDTSEAWIPGPSLISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTDIKVPDAE 347
+ + S+A + ++ P+L L W PLH+ GWG+LVP + D
Sbjct: 310 PVKELSQA------DVKLKSRVVPRLFGLCWGPYPLHYKTDKGWGFLVPKDPRTALSDVP 363
Query: 348 NIPLEQLKQLYNNITKQDNCEANVDNAQNSLRDSVETNISFIDCSKSAKRLEVIANVLDK 407
+ + + + +A + V+ +S I +K+ E I +VL
Sbjct: 364 EM---------DEVVLRRGVKATI---------PVKAILSLIQQNKA----EGIGDVL-- 399
Query: 408 KKLAEASSTDTSTDDADTPREIGFIKLPHKDGEHLNVGNPLSRDF 452
L + S+ T+ F KLPH +GEH NVG+P+S+ F
Sbjct: 400 --LTHSHSSTTTISI------FNFHKLPHPNGEHDNVGDPISKAF 436
>gi|308502794|ref|XP_003113581.1| hypothetical protein CRE_26056 [Caenorhabditis remanei]
gi|308263540|gb|EFP07493.1| hypothetical protein CRE_26056 [Caenorhabditis remanei]
Length = 444
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 56/100 (56%), Gaps = 9/100 (9%)
Query: 5 SWTNVSSLNSLSEVYKLYCEGKVLDK---------TDRNIFVEGSLEDIENNWHNLMTYC 55
+W + S NSL V++ + + L K R+ FV+ +E+I + LMTYC
Sbjct: 261 TWKDRVSKNSLVAVHEHFYPFRKLQKHQDGDESKEKQRSAFVKEPIENIRLKFQKLMTYC 320
Query: 56 AKDTLATFEVIQALFPLFLERFPHPVTLAGMLELSTAYLP 95
A+D + E+ L+P F++RFPHP TL+GML + YLP
Sbjct: 321 ARDNILCAEIYFGLWPEFVKRFPHPATLSGMLNMGNVYLP 360
>gi|402577477|gb|EJW71433.1| hypothetical protein WUBG_17662, partial [Wuchereria bancrofti]
Length = 70
Score = 72.0 bits (175), Expect = 2e-09, Method: Composition-based stats.
Identities = 34/80 (42%), Positives = 55/80 (68%), Gaps = 12/80 (15%)
Query: 547 ERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSN 606
+ +G+ L++M++ P+ + I+GADVDSQE WIA+++GD C ++ +G KS+
Sbjct: 3 QMIGTNLKSMVECPENWHIVGADVDSQEQWIAAMLGDC-CVRK-----------AGCKSD 50
Query: 607 ATDMHSITAKAVGISREHAK 626
+D+HS+ AK VGISR+ AK
Sbjct: 51 NSDLHSVIAKEVGISRDKAK 70
>gi|148675118|gb|EDL07065.1| polymerase (DNA directed), gamma, isoform CRA_a [Mus musculus]
Length = 61
Score = 67.8 bits (164), Expect = 3e-08, Method: Composition-based stats.
Identities = 30/54 (55%), Positives = 40/54 (74%)
Query: 830 KLDMTDIPLSISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDI 883
KL + D+P S++FFS V+ID+ LRKE DCKTPSNP G+ + YGIP G L++
Sbjct: 5 KLGLNDLPQSVAFFSAVDIDQCLRKEVTMDCKTPSNPTGMERRYGIPQGCDLEL 58
>gi|238590987|ref|XP_002392480.1| hypothetical protein MPER_07935 [Moniliophthora perniciosa FA553]
gi|215458579|gb|EEB93410.1| hypothetical protein MPER_07935 [Moniliophthora perniciosa FA553]
Length = 565
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 83/203 (40%), Gaps = 54/203 (26%)
Query: 298 PGPSLISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTDIKVPDAENIPLEQLKQL 357
PG I+ + P LL ++W PL F R HGW + VP
Sbjct: 393 PGSLDITIRNRYAPLLLKMSWHGYPLFFSREHGWTFRVP--------------------- 431
Query: 358 YNNITKQDNCEANVDNAQNSLRDSVETNISFIDCSKSAKRLEVIANVLDKKKLAEASSTD 417
+D A V +AQ + T +SF + + KLAEAS D
Sbjct: 432 --TRPTEDFDPAVVASAQEKFQRL--TALSFYEP--------------EDDKLAEASLRD 473
Query: 418 TSTDDADTPREIGFIKLPHKDGEHLNVGNPLSRDFINKFSDN---SLAGVDIGAKRIIEI 474
F KLPHKDG+ NVG+PL++ F+ D S AG ++ K +++I
Sbjct: 474 GYV----------FYKLPHKDGDKANVGSPLTKGFLRFAMDGVMTSHAGDEL--KELVDI 521
Query: 475 SRMLSYWRNNHERVKKQFVVWLN 497
SYW + +R+ Q V W N
Sbjct: 522 GVKSSYWISARDRIMNQRVEWAN 544
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 51/90 (56%), Gaps = 1/90 (1%)
Query: 6 WTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLATFEV 65
W +++S NSL +V KL+C + K R F+ + E+I + + + YCA D T V
Sbjct: 35 WEDLTSANSLVDVAKLHCNIDI-SKEIRGDFMTATPEEIRTDITDYLAYCAGDVDVTHNV 93
Query: 66 IQALFPLFLERFPHPVTLAGMLELSTAYLP 95
+ + P FL PHPV+ AG+L + + +LP
Sbjct: 94 YRKVLPGFLNACPHPVSFAGVLTMGSGFLP 123
>gi|158425221|ref|YP_001526513.1| DNA polymerase [Azorhizobium caulinodans ORS 571]
gi|158332110|dbj|BAF89595.1| DNA polymerase [Azorhizobium caulinodans ORS 571]
Length = 609
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 78/162 (48%), Gaps = 8/162 (4%)
Query: 506 VENIESEGRDYGVILPQLIVSGTLTRRAVEATWMTASNAVGERVGSELRAMIQAPDGYSI 565
+++++++GR +G + V+G +T + + G G R + A +
Sbjct: 328 LKHVKADGRIHGDVTTNGAVTGRMTHSKPNIAQVPGN---GSPYGHRCRELFVAAKRKLL 384
Query: 566 IGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMHSITAKAVGISREHA 625
+G D D+ EL + Y A+ G + L G+K TDMH++ AKA+G SR+ A
Sbjct: 385 VGCDADALELRCLA----GYMARYDGGAYVR-TVLEGKKELGTDMHTLNAKALGCSRDVA 439
Query: 626 KIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTL 667
K+ YA IYGAG+ +L E K +S+AR + L
Sbjct: 440 KVWFYAFIYGAGDFKLGTILGAPKGEEQKWGRRSRARFLKAL 481
>gi|229472361|gb|ACQ72695.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 192
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 81/156 (51%), Gaps = 22/156 (14%)
Query: 553 LRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMHS 612
RA++ A GY+++GAD+ EL + + Y A+ G G + L+G D+H
Sbjct: 12 FRALLTASPGYAMVGADLAGIELRMLA----HYLARYDGGR-YGDVLLNG------DIHQ 60
Query: 613 ITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKGKK 672
A +GISR K + YA +YGAG+ E++ ++P++S+ DA +K +++ ++
Sbjct: 61 ENADKIGISRRLVKTVTYAFLYGAGD---EKIGLSYDPQLSEKDATTKGKEI------RQ 111
Query: 673 LYRLKDGHLEELIKRVYSKYEAR--EVCSAYNTSVD 706
Y LE+L+ V SK E+ ++C VD
Sbjct: 112 AYMDAIPGLEKLVTAVRSKAESGYIQLCDGRRCPVD 147
>gi|229472365|gb|ACQ72697.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 192
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 80/156 (51%), Gaps = 22/156 (14%)
Query: 553 LRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMHS 612
RA+ A GY++IGAD+ EL + + Y A+ G G + L+G D+H
Sbjct: 12 FRALFTASPGYAMIGADLAGIELRMLA----HYLARYDGGR-YGDVLLNG------DIHQ 60
Query: 613 ITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKGKK 672
A +GISR K + YA +YGAG++ ++ ++P++S+ DA +K +++ ++
Sbjct: 61 ENADKIGISRRLVKTVTYAFLYGAGDK---KIGLSYDPQLSEKDATTKGKEI------RQ 111
Query: 673 LYRLKDGHLEELIKRVYSKYEAR--EVCSAYNTSVD 706
Y LE+L+ V SK E+ ++C VD
Sbjct: 112 AYMDAIPGLEKLVTAVKSKAESGYIQLCDGRRCPVD 147
>gi|229472227|gb|ACQ72628.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 192
Score = 60.1 bits (144), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 80/156 (51%), Gaps = 22/156 (14%)
Query: 553 LRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMHS 612
RA+ A GY+++GAD+ EL + + Y A+ G G + L+G D+H
Sbjct: 12 FRALFTASPGYAMVGADLAGIELRMLA----HYLARYEGGR-YGDVLLNG------DIHQ 60
Query: 613 ITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKGKK 672
A +GISR K + YA +YGAG++ ++ ++P++S+ DA +K +++ ++
Sbjct: 61 ENADKIGISRRLVKTVTYAFLYGAGDK---KIGLSYDPQLSEKDATTKGKEI------RQ 111
Query: 673 LYRLKDGHLEELIKRVYSKYEAR--EVCSAYNTSVD 706
Y LE+L+ V SK E+ ++C VD
Sbjct: 112 AYMDAIPGLEKLVTAVKSKAESGYIQLCDGRRCPVD 147
>gi|229472339|gb|ACQ72684.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 192
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 80/156 (51%), Gaps = 22/156 (14%)
Query: 553 LRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMHS 612
RA+ A GY+++GAD+ EL + + Y A+ G G + L+G D+H
Sbjct: 12 FRALFTASPGYAMVGADLAGIELRMLA----HYLARYEGGR-YGDVLLNG------DIHQ 60
Query: 613 ITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKGKK 672
A +GISR K + YA +YGAG++ ++ ++P++S+ DA +K +++ ++
Sbjct: 61 ENADKIGISRRLVKTVTYAFLYGAGDK---KIGLSYDPQLSEKDATTKGKEI------RQ 111
Query: 673 LYRLKDGHLEELIKRVYSKYEAR--EVCSAYNTSVD 706
Y LE+L+ V SK E+ ++C VD
Sbjct: 112 AYMDAIPGLEKLVTAVKSKAESGYIQLCDGRRCPVD 147
>gi|229472577|gb|ACQ72803.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 192
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 80/156 (51%), Gaps = 22/156 (14%)
Query: 553 LRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMHS 612
RA+ A GY+++GAD+ EL + + Y A+ G G + L+G D+H
Sbjct: 12 FRALFTASPGYAMVGADLAGIELRMLA----HYLARYDGGR-YGDVLLNG------DIHQ 60
Query: 613 ITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKGKK 672
A +GISR K + YA +YGAG++ ++ ++P++S+ DA +K +++ ++
Sbjct: 61 ENADKIGISRRLVKTVTYAFLYGAGDK---KIGLSYDPQLSEKDATTKGKEI------RQ 111
Query: 673 LYRLKDGHLEELIKRVYSKYEAR--EVCSAYNTSVD 706
Y LE+L+ V SK E+ ++C VD
Sbjct: 112 AYMDAIPGLEKLVTAVKSKAESGYIQLCDGRRCPVD 147
>gi|229472341|gb|ACQ72685.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 192
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 80/156 (51%), Gaps = 22/156 (14%)
Query: 553 LRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMHS 612
RA+ A GY+++GAD+ EL + + Y A+ G G + L+G D+H
Sbjct: 12 FRALFTASPGYTMVGADLAGIELRMLA----HYLARYDGGR-YGDVLLNG------DIHQ 60
Query: 613 ITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKGKK 672
A +GISR K + YA +YGAG++ ++ ++P++S+ DA +K +++ ++
Sbjct: 61 ENADKIGISRRLVKTVTYAFLYGAGDK---KIGLSYDPQLSEKDATTKGKEI------RQ 111
Query: 673 LYRLKDGHLEELIKRVYSKYEAR--EVCSAYNTSVD 706
Y LE+L+ V SK E+ ++C VD
Sbjct: 112 AYMDAIPGLEKLVTAVKSKAESGYIQLCDGRRCPVD 147
>gi|229472467|gb|ACQ72748.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 192
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 80/156 (51%), Gaps = 22/156 (14%)
Query: 553 LRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMHS 612
RA+ A GY+++GAD+ EL + + Y A+ G G + L+G D+H
Sbjct: 12 FRALFTASPGYAMVGADLAGIELRMLA----HYLARYDGGR-YGDVLLNG------DIHQ 60
Query: 613 ITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKGKK 672
A +GISR K + YA +YGAG++ ++ ++P++S+ DA +K +++ ++
Sbjct: 61 ENADKIGISRRLVKTVTYAFLYGAGDK---KIGLSYDPQLSEKDATTKGKEI------RQ 111
Query: 673 LYRLKDGHLEELIKRVYSKYEAR--EVCSAYNTSVD 706
Y LE+L+ V SK E+ ++C VD
Sbjct: 112 AYMDAIPGLEKLVTAVKSKAESGYIQLCDGRRCPVD 147
>gi|229472269|gb|ACQ72649.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 192
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 80/156 (51%), Gaps = 22/156 (14%)
Query: 553 LRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMHS 612
RA+ A GY+++GAD+ EL + + Y A+ G G + L+G D+H
Sbjct: 12 FRALFTASPGYAMVGADLAGIELRMLA----HYLARYDGGR-YGDVLLNG------DIHQ 60
Query: 613 ITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKGKK 672
A +GISR K + YA +YGAG++ ++ ++P++S+ DA +K +++ ++
Sbjct: 61 ENADKIGISRRLVKTVTYAFLYGAGDK---KIGLSYDPQLSEKDATTKGKEI------RQ 111
Query: 673 LYRLKDGHLEELIKRVYSKYEAR--EVCSAYNTSVD 706
Y LE+L+ V SK E+ ++C VD
Sbjct: 112 AYMDAIPGLEKLVTAVKSKAESGYIQLCDGRRCPVD 147
>gi|229472537|gb|ACQ72783.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 192
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 80/156 (51%), Gaps = 22/156 (14%)
Query: 553 LRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMHS 612
RA++ A GY+++GAD+ EL + + Y A+ G G + L+G D+H
Sbjct: 12 FRALLTASPGYAMVGADLAGIELRMLA----HYLARYDGGR-YGDVLLNG------DIHQ 60
Query: 613 ITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKGKK 672
A +GISR K + YA +YGAG + ++ ++P++S+ DA +K +++ ++
Sbjct: 61 ENADKIGISRRLVKTVTYAFLYGAGNK---KIGLSYDPQLSEKDATTKGKEI------RQ 111
Query: 673 LYRLKDGHLEELIKRVYSKYEAR--EVCSAYNTSVD 706
Y LE+L+ V SK E+ ++C VD
Sbjct: 112 AYMDAIPGLEKLVTAVKSKAESGYIQLCDGRRCPVD 147
>gi|229472259|gb|ACQ72644.1| DNA polymerase [Uncultured T7-like podovirus]
gi|229472389|gb|ACQ72709.1| DNA polymerase [Uncultured T7-like podovirus]
gi|229472463|gb|ACQ72746.1| DNA polymerase [Uncultured T7-like podovirus]
gi|229472553|gb|ACQ72791.1| DNA polymerase [Uncultured T7-like podovirus]
gi|229472573|gb|ACQ72801.1| DNA polymerase [Uncultured T7-like podovirus]
gi|229472587|gb|ACQ72808.1| DNA polymerase [Uncultured T7-like podovirus]
gi|229472597|gb|ACQ72813.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 192
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 80/156 (51%), Gaps = 22/156 (14%)
Query: 553 LRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMHS 612
RA+ A GY+++GAD+ EL + + Y A+ G G + L+G D+H
Sbjct: 12 FRALFTASPGYAMVGADLAGIELRMLA----HYLARYDGGR-YGDVLLNG------DIHQ 60
Query: 613 ITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKGKK 672
A +GISR K + YA +YGAG++ ++ ++P++S+ DA +K +++ ++
Sbjct: 61 ENADKIGISRRLVKTVTYAFLYGAGDK---KIGLSYDPQLSEKDATTKGKEI------RQ 111
Query: 673 LYRLKDGHLEELIKRVYSKYEAR--EVCSAYNTSVD 706
Y LE+L+ V SK E+ ++C VD
Sbjct: 112 AYMDAIPGLEKLVTAVKSKAESGYIQLCDGRRCPVD 147
>gi|229472243|gb|ACQ72636.1| DNA polymerase [Uncultured T7-like podovirus]
gi|229472435|gb|ACQ72732.1| DNA polymerase [Uncultured T7-like podovirus]
gi|229472469|gb|ACQ72749.1| DNA polymerase [Uncultured T7-like podovirus]
gi|229472473|gb|ACQ72751.1| DNA polymerase [Uncultured T7-like podovirus]
gi|229472481|gb|ACQ72755.1| DNA polymerase [Uncultured T7-like podovirus]
gi|229472489|gb|ACQ72759.1| DNA polymerase [Uncultured T7-like podovirus]
gi|229472497|gb|ACQ72763.1| DNA polymerase [Uncultured T7-like podovirus]
gi|229472575|gb|ACQ72802.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 192
Score = 59.7 bits (143), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 80/156 (51%), Gaps = 22/156 (14%)
Query: 553 LRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMHS 612
RA+ A GY+++GAD+ EL + + Y A+ G G + L+G D+H
Sbjct: 12 FRALFTASPGYAMVGADLAGIELRMLA----HYLARYDGGR-YGDVLLNG------DIHQ 60
Query: 613 ITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKGKK 672
A +GISR K + YA +YGAG++ ++ ++P++S+ DA +K +++ ++
Sbjct: 61 ENADKIGISRRLVKTVTYAFLYGAGDK---KIGLSYDPQLSEKDATTKGKEI------RQ 111
Query: 673 LYRLKDGHLEELIKRVYSKYEAR--EVCSAYNTSVD 706
Y LE+L+ V SK E+ ++C VD
Sbjct: 112 AYMDAIPGLEKLVTAVKSKAESGYIQLCDGRRCPVD 147
>gi|229472237|gb|ACQ72633.1| DNA polymerase [Uncultured T7-like podovirus]
gi|229472591|gb|ACQ72810.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 192
Score = 59.7 bits (143), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 80/156 (51%), Gaps = 22/156 (14%)
Query: 553 LRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMHS 612
RA+ A GY+++GAD+ EL + + Y A+ G G + L+G D+H
Sbjct: 12 FRALFTASPGYAMVGADLAGIELRMLA----HYLARYDGGR-YGDVLLNG------DIHQ 60
Query: 613 ITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKGKK 672
A +GISR K + YA +YGAG++ ++ ++P++S+ DA +K +++ ++
Sbjct: 61 ENADKIGISRRLVKTVTYAFLYGAGDK---KIGLSYDPQLSEKDATTKGKEI------RQ 111
Query: 673 LYRLKDGHLEELIKRVYSKYEAR--EVCSAYNTSVD 706
Y LE+L+ V SK E+ ++C VD
Sbjct: 112 AYMDAIPGLEKLVTAVKSKAESGYIQLCDGRRCPVD 147
>gi|229472221|gb|ACQ72625.1| DNA polymerase [Uncultured T7-like podovirus]
gi|229472277|gb|ACQ72653.1| DNA polymerase [Uncultured T7-like podovirus]
gi|229472293|gb|ACQ72661.1| DNA polymerase [Uncultured T7-like podovirus]
gi|229472375|gb|ACQ72702.1| DNA polymerase [Uncultured T7-like podovirus]
gi|229472445|gb|ACQ72737.1| DNA polymerase [Uncultured T7-like podovirus]
gi|229472465|gb|ACQ72747.1| DNA polymerase [Uncultured T7-like podovirus]
gi|229472501|gb|ACQ72765.1| DNA polymerase [Uncultured T7-like podovirus]
gi|229472515|gb|ACQ72772.1| DNA polymerase [Uncultured T7-like podovirus]
gi|229472547|gb|ACQ72788.1| DNA polymerase [Uncultured T7-like podovirus]
gi|229472579|gb|ACQ72804.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 192
Score = 59.7 bits (143), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 80/156 (51%), Gaps = 22/156 (14%)
Query: 553 LRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMHS 612
RA+ A GY+++GAD+ EL + + Y A+ G G + L+G D+H
Sbjct: 12 FRALFTASPGYAMVGADLAGIELRMLA----HYLARYDGGR-YGDVLLNG------DIHQ 60
Query: 613 ITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKGKK 672
A +GISR K + YA +YGAG++ ++ ++P++S+ DA +K +++ ++
Sbjct: 61 ENADKIGISRRLVKTVTYAFLYGAGDK---KIGLSYDPQLSEKDATTKGKEI------RQ 111
Query: 673 LYRLKDGHLEELIKRVYSKYEAR--EVCSAYNTSVD 706
Y LE+L+ V SK E+ ++C VD
Sbjct: 112 AYMDAIPGLEKLVTAVKSKAESGYIQLCDGRRCPVD 147
>gi|229472261|gb|ACQ72645.1| DNA polymerase [Uncultured T7-like podovirus]
gi|229472379|gb|ACQ72704.1| DNA polymerase [Uncultured T7-like podovirus]
gi|229472605|gb|ACQ72817.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 192
Score = 59.7 bits (143), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 80/156 (51%), Gaps = 22/156 (14%)
Query: 553 LRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMHS 612
RA+ A GY+++GAD+ EL + + Y A+ G G + L+G D+H
Sbjct: 12 FRALFTASPGYAMVGADLAGIELRMLA----HYLARYDGGR-YGDVLLNG------DIHQ 60
Query: 613 ITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKGKK 672
A +GISR K + YA +YGAG++ ++ ++P++S+ DA +K +++ ++
Sbjct: 61 ENADKIGISRRLVKTVTYAFLYGAGDK---KIGLSYDPQLSEKDATTKGKEI------RQ 111
Query: 673 LYRLKDGHLEELIKRVYSKYEAR--EVCSAYNTSVD 706
Y LE+L+ V SK E+ ++C VD
Sbjct: 112 AYMDAIPGLEKLVTAVKSKAESGYIQLCDGRRCPVD 147
>gi|229472391|gb|ACQ72710.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 191
Score = 59.7 bits (143), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 80/156 (51%), Gaps = 22/156 (14%)
Query: 553 LRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMHS 612
RA+ A GY+++GAD+ EL + + Y A+ G G + L+G D+H
Sbjct: 12 FRALFTASPGYAMVGADLAGIELRMLA----HYLARYDGGR-YGDVLLNG------DIHQ 60
Query: 613 ITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKGKK 672
A +GISR K + YA +YGAG++ ++ ++P++S+ DA +K +++ ++
Sbjct: 61 ENADKIGISRRLVKTVTYAFLYGAGDK---KIGLSYDPQLSEKDATTKGKEI------RQ 111
Query: 673 LYRLKDGHLEELIKRVYSKYEAR--EVCSAYNTSVD 706
Y LE+L+ V SK E+ ++C VD
Sbjct: 112 AYMDAIPGLEKLVTAVKSKAESGYIQLCDGRRCPVD 147
>gi|229472453|gb|ACQ72741.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 192
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 80/156 (51%), Gaps = 22/156 (14%)
Query: 553 LRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMHS 612
RA+ A GY+++GAD+ EL + + Y A+ G G + L+G D+H
Sbjct: 12 FRALFTASPGYAMVGADLAGIELRMLA----HYLARYDGGR-YGDVLLNG------DIHQ 60
Query: 613 ITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKGKK 672
A +GISR K + YA +YGAG++ ++ ++P++S+ DA +K +++ ++
Sbjct: 61 ENADKIGISRRLVKTVTYAFLYGAGDK---KIGLSYDPQLSEKDAATKGKEI------RQ 111
Query: 673 LYRLKDGHLEELIKRVYSKYEAR--EVCSAYNTSVD 706
Y LE+L+ V SK E+ ++C VD
Sbjct: 112 AYMDAIPGLEKLVTAVKSKAESGYIQLCDGRRCPVD 147
>gi|229472179|gb|ACQ72604.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 192
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 80/156 (51%), Gaps = 22/156 (14%)
Query: 553 LRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMHS 612
RA+ A GY+++GAD+ EL + + Y A+ G G + L+G D+H
Sbjct: 12 FRALFTASPGYAMVGADLAGIELRMLA----HYLARYDGGR-YGDVLLNG------DIHQ 60
Query: 613 ITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKGKK 672
A +GISR K + YA +YGAG++ ++ ++P++S+ DA +K +++ ++
Sbjct: 61 ENADKIGISRRLVKTVTYAFLYGAGDK---KIGLSYDPQLSEKDATTKGKEI------RQ 111
Query: 673 LYRLKDGHLEELIKRVYSKYEAR--EVCSAYNTSVD 706
Y LE+L+ V SK E+ ++C VD
Sbjct: 112 AYMDAIPGLEKLVTAVKSKAESGYIQLCDGRRCPVD 147
>gi|229472557|gb|ACQ72793.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 192
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 80/156 (51%), Gaps = 22/156 (14%)
Query: 553 LRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMHS 612
RA+ A GY+++GAD+ EL + + Y A+ G G + L+G D+H
Sbjct: 12 FRALFTASPGYAMVGADLAGIELRMLA----HYLARYDGGR-YGDVLLNG------DIHQ 60
Query: 613 ITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKGKK 672
A +GISR K + YA +YGAG++ ++ ++P++S+ DA +K +++ ++
Sbjct: 61 ENADRIGISRRLVKTVTYAFLYGAGDK---KIGLSYDPQLSEKDATTKGKEI------RQ 111
Query: 673 LYRLKDGHLEELIKRVYSKYEAR--EVCSAYNTSVD 706
Y LE+L+ V SK E+ ++C VD
Sbjct: 112 AYMDAIPGLEKLVTAVKSKAESGYIQLCDGRRCPVD 147
>gi|229472355|gb|ACQ72692.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 192
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 80/156 (51%), Gaps = 22/156 (14%)
Query: 553 LRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMHS 612
RA+ A GY+++GAD+ EL + + Y A+ G G + L+G D+H
Sbjct: 12 FRALFTASPGYAMVGADLAGIELRMLA----HYLARYDGGR-YGDVLLNG------DIHQ 60
Query: 613 ITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKGKK 672
A +GISR K + YA +YGAG++ ++ ++P++S+ DA +K +++ ++
Sbjct: 61 ENADKIGISRRLVKTVTYAFLYGAGDK---KIGLSYDPQLSEKDATTKGKEI------RQ 111
Query: 673 LYRLKDGHLEELIKRVYSKYEAR--EVCSAYNTSVD 706
Y LE+L+ V SK E+ ++C VD
Sbjct: 112 AYMDAIPGLEKLVTAVKSKAESGYIQLCDGRCCPVD 147
>gi|229472423|gb|ACQ72726.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 192
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 79/156 (50%), Gaps = 22/156 (14%)
Query: 553 LRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMHS 612
RA+ A GY ++GAD+ EL + + Y A+ G G + L+G D+H
Sbjct: 12 FRALFTASPGYVMVGADLAGIELRMLA----HYLARYDGGR-YGDVLLNG------DIHQ 60
Query: 613 ITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKGKK 672
A +GISR K + YA +YGAG++ ++ ++P++S+ DA +K +++ ++
Sbjct: 61 ENADKIGISRRLVKTVTYAFLYGAGDK---KIGLSYDPQLSEKDATTKGKEI------RQ 111
Query: 673 LYRLKDGHLEELIKRVYSKYEAR--EVCSAYNTSVD 706
Y LE+L+ V SK E+ ++C VD
Sbjct: 112 AYMDAIPGLEKLVTAVKSKAESGYIQLCDGRRCPVD 147
>gi|229472249|gb|ACQ72639.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 192
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 79/156 (50%), Gaps = 22/156 (14%)
Query: 553 LRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMHS 612
RA+ A GY ++GAD+ EL + + Y A+ G G + L+G D+H
Sbjct: 12 FRALFTASPGYVMVGADLAGIELRMLA----HYLARYDGGR-YGDVLLNG------DIHQ 60
Query: 613 ITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKGKK 672
A +GISR K + YA +YGAG++ ++ ++P++S+ DA +K +++ ++
Sbjct: 61 ENADKIGISRRLVKTVTYAFLYGAGDK---KIGLSYDPQLSEKDATTKGKEI------RQ 111
Query: 673 LYRLKDGHLEELIKRVYSKYEAR--EVCSAYNTSVD 706
Y LE+L+ V SK E+ ++C VD
Sbjct: 112 AYMDAIPGLEKLVTAVKSKAESGYIQLCDGRRCPVD 147
>gi|229472235|gb|ACQ72632.1| DNA polymerase [Uncultured T7-like podovirus]
gi|229472491|gb|ACQ72760.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 192
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 79/156 (50%), Gaps = 22/156 (14%)
Query: 553 LRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMHS 612
RA+ A GY ++GAD+ EL + + Y A+ G G + L+G D+H
Sbjct: 12 FRALFTASPGYVMVGADLAGIELRMLA----HYLARYDGGR-YGDVLLNG------DIHQ 60
Query: 613 ITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKGKK 672
A +GISR K + YA +YGAG++ ++ ++P++S+ DA +K +++ ++
Sbjct: 61 ENADKIGISRRLVKTVTYAFLYGAGDK---KIGLSYDPQLSEKDATTKGKEI------RQ 111
Query: 673 LYRLKDGHLEELIKRVYSKYEAR--EVCSAYNTSVD 706
Y LE+L+ V SK E+ ++C VD
Sbjct: 112 AYMDAIPGLEKLVTAVKSKAESGYIQLCDGRRCPVD 147
>gi|229472257|gb|ACQ72643.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 192
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 79/156 (50%), Gaps = 22/156 (14%)
Query: 553 LRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMHS 612
RA+ A GY+++GAD+ EL + + Y A G G + L+G D+H
Sbjct: 12 FRALFTASPGYAMVGADLAGIELRMLA----HYLAHYDGGR-YGDVLLNG------DIHQ 60
Query: 613 ITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKGKK 672
A +GISR K + YA +YGAG++ ++ ++P++S+ DA +K +++ ++
Sbjct: 61 ENADKIGISRRLVKTVTYAFLYGAGDK---KIGLSYDPQLSEKDATTKGKEI------RQ 111
Query: 673 LYRLKDGHLEELIKRVYSKYEAR--EVCSAYNTSVD 706
Y LE+L+ V SK E+ ++C VD
Sbjct: 112 AYMDAIPGLEKLVTAVKSKAESGYIQLCDGRRCPVD 147
>gi|229472213|gb|ACQ72621.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 192
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 79/156 (50%), Gaps = 22/156 (14%)
Query: 553 LRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMHS 612
RA+ A GY+++GAD+ EL + + Y A+ G G + L+G D+H
Sbjct: 12 FRALFTASPGYAMVGADLAGIELRMLA----HYLARYDGGR-YGDVLLNG------DIHQ 60
Query: 613 ITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKGKK 672
A +GISR K + YA +YGAG++ ++ ++P++S+ DA +K +++ ++
Sbjct: 61 ENADKIGISRRLVKTVTYAFLYGAGDK---KVGLSYDPQLSEKDATTKGKEI------RQ 111
Query: 673 LYRLKDGHLEELIKRVYSKYEAREV--CSAYNTSVD 706
Y LE+L+ V SK E+ + C VD
Sbjct: 112 AYMDAIPGLEKLVTAVKSKAESGYIRLCDGRRCPVD 147
>gi|229472541|gb|ACQ72785.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 192
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 79/156 (50%), Gaps = 22/156 (14%)
Query: 553 LRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMHS 612
RA+ A GY+++GAD+ EL + + Y A+ G G + L+G D+H
Sbjct: 12 FRALFTASPGYAMVGADLAGIELRMLA----HYLARYDGGR-YGDVLLNG------DIHQ 60
Query: 613 ITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKGKK 672
A +GI R K + YA +YGAG++ ++ ++P++S+ DA +K +++ ++
Sbjct: 61 ENADKIGIGRRLVKTVTYAFLYGAGDK---KIGLSYDPQLSEKDATTKGKEI------RQ 111
Query: 673 LYRLKDGHLEELIKRVYSKYEAR--EVCSAYNTSVD 706
Y LE+L+ V SK E+ ++C VD
Sbjct: 112 AYMDAIPGLEKLVTAVKSKAESGYIQLCDGRRCPVD 147
>gi|229472273|gb|ACQ72651.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 192
Score = 58.2 bits (139), Expect = 2e-05, Method: Composition-based stats.
Identities = 45/156 (28%), Positives = 78/156 (50%), Gaps = 22/156 (14%)
Query: 553 LRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMHS 612
RA+ A GY+++GAD+ EL + + Y A+ G G + L+G D+H
Sbjct: 12 FRALFTASPGYAMVGADLAGIELRMLA----HYLARYDGGR-YGDVLLNG------DIHQ 60
Query: 613 ITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKGKK 672
A +GISR K + YA +YGAG++ ++ ++P++S A +K +++ ++
Sbjct: 61 ENADKIGISRRLVKTVTYAFLYGAGDK---KIGLSYDPQLSDKAATAKGKEI------RQ 111
Query: 673 LYRLKDGHLEELIKRVYSKYEAR--EVCSAYNTSVD 706
Y LE+L+ V SK E+ ++C VD
Sbjct: 112 AYMDAIPGLEKLVTAVKSKAESGYIQLCDGRRCPVD 147
>gi|229472271|gb|ACQ72650.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 192
Score = 58.2 bits (139), Expect = 2e-05, Method: Composition-based stats.
Identities = 45/156 (28%), Positives = 78/156 (50%), Gaps = 22/156 (14%)
Query: 553 LRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMHS 612
RA+ A GY+++GAD+ EL + + Y A+ G G + L+G D+H
Sbjct: 12 FRALFTASPGYAMVGADLAGIELRMLA----HYLARYDGGR-YGDVLLNG------DIHQ 60
Query: 613 ITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKGKK 672
A +GISR K + YA +YGAG++ ++ ++P++S A +K +++ ++
Sbjct: 61 ENADKIGISRRLVKTVTYAFLYGAGDK---KIGLSYDPQLSDKAATAKGKEI------RQ 111
Query: 673 LYRLKDGHLEELIKRVYSKYEAR--EVCSAYNTSVD 706
Y LE+L+ V SK E+ ++C VD
Sbjct: 112 AYMDAIPGLEKLVTAVKSKAESGYIQLCDGRRCPVD 147
>gi|229472439|gb|ACQ72734.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 192
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 79/156 (50%), Gaps = 22/156 (14%)
Query: 553 LRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMHS 612
RA+ A GY+++GAD+ EL + + Y A+ G G + L+G D+H
Sbjct: 12 FRALFTASPGYAMVGADLAGIELRMLA----HYLARYDGGR-YGDVLLNG------DIHQ 60
Query: 613 ITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKGKK 672
A +GISR K + YA +YGAG++ ++ ++P++ + DA +K +++ ++
Sbjct: 61 ENADKIGISRRLVKTVTYAFLYGAGDK---KIGLSYDPQLPEKDATTKGKEI------RQ 111
Query: 673 LYRLKDGHLEELIKRVYSKYEAR--EVCSAYNTSVD 706
Y LE+L+ V SK E+ ++C VD
Sbjct: 112 AYMDAIPGLEKLVTAVKSKAESGYIQLCDGRRCPVD 147
>gi|229472239|gb|ACQ72634.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 192
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 80/156 (51%), Gaps = 22/156 (14%)
Query: 553 LRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMHS 612
RA+ A GY+++GAD+ EL + + Y A+ G G + L+ +D+H
Sbjct: 12 FRALFTASPGYAMVGADLAGIELRMLA----HYLARYDGGR-YGDVLLN------SDIHQ 60
Query: 613 ITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKGKK 672
A +GISR K + YA +YGAG++ ++ ++P++S+ DA +K +++ ++
Sbjct: 61 ENADKIGISRRLVKTVTYAFLYGAGDK---KIGLSYDPQLSEKDATTKGKEI------RQ 111
Query: 673 LYRLKDGHLEELIKRVYSKYEAR--EVCSAYNTSVD 706
Y LE+L+ V SK E+ ++C VD
Sbjct: 112 AYMDAIPGLEKLVTAVKSKAESGYIQLCDGRRCPVD 147
>gi|229472371|gb|ACQ72700.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 192
Score = 57.8 bits (138), Expect = 3e-05, Method: Composition-based stats.
Identities = 45/156 (28%), Positives = 78/156 (50%), Gaps = 22/156 (14%)
Query: 553 LRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMHS 612
RA+ A GY+++GAD+ EL + + Y A+ G G + L+G D+H
Sbjct: 12 FRALFTASPGYAMVGADLAGIELRMLA----HYLARYDGGR-YGDVLLNG------DIHQ 60
Query: 613 ITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKGKK 672
A +GISR K + YA +YGAG++ ++ ++P++S A +K +++ ++
Sbjct: 61 ENADKIGISRRLVKTVTYAFLYGAGDK---KIGLSYDPQLSDKAATAKGKEV------RQ 111
Query: 673 LYRLKDGHLEELIKRVYSKYEAR--EVCSAYNTSVD 706
Y LE+L+ V SK E+ ++C VD
Sbjct: 112 AYMDAIPGLEKLVTAVKSKAESGYIQLCDGRRCPVD 147
>gi|229472495|gb|ACQ72762.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 192
Score = 57.0 bits (136), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 78/156 (50%), Gaps = 22/156 (14%)
Query: 553 LRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMHS 612
RA+ A GY ++GAD+ EL + + Y A+ G G + L+G D+H
Sbjct: 12 FRALFTASPGYVMVGADLAGIELRMLA----HYLARYDGGR-YGDVLLNG------DIHQ 60
Query: 613 ITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKGKK 672
A +GISR K YA +YGAG++ ++ ++P++S+ DA +K +++ ++
Sbjct: 61 ENADKIGISRRLVKTATYAFLYGAGDK---KIGLSYDPQLSEKDATTKGKEI------RQ 111
Query: 673 LYRLKDGHLEELIKRVYSKYEAR--EVCSAYNTSVD 706
Y LE+L+ V SK E+ ++C VD
Sbjct: 112 AYMDAIPGLEKLVTAVKSKAESGYIQLCDGRRCPVD 147
>gi|156349214|ref|XP_001621965.1| hypothetical protein NEMVEDRAFT_v1g221347 [Nematostella vectensis]
gi|156208335|gb|EDO29865.1| predicted protein [Nematostella vectensis]
Length = 326
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Query: 491 QFVVWLNKKDLPRRLVENIE-SEGRDYGVILPQLIVSGTLTRRAVEATWMTASN 543
Q VW DLP ++ + + S YG I+P++I +GT+TRRAVE TW+TASN
Sbjct: 86 QMAVWFGADDLPDQVKRSAQFSSHNTYGAIVPRVISAGTVTRRAVEPTWLTASN 139
>gi|229472589|gb|ACQ72809.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 192
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 78/156 (50%), Gaps = 22/156 (14%)
Query: 553 LRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMHS 612
RA+ A GY+++GAD+ EL + + Y A+ G G + L+G D+H
Sbjct: 12 FRALFTASPGYAMVGADLAGIELRMLA----HYLARYDGGR-YGDVLLNG------DIHQ 60
Query: 613 ITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKGKK 672
A +GISR K + YA +YGAG++ ++ ++P++S A +K +++ ++
Sbjct: 61 ENADKIGISRRLVKTVTYAFLYGAGDK---KIGLSYDPQLSDKAATAKGKEI------RQ 111
Query: 673 LYRLKDGHLEELIKRVYSKYEAR--EVCSAYNTSVD 706
Y LE+L+ V SK E+ ++C VD
Sbjct: 112 AYMDAIPGLEKLVTAVKSKAESGYIQLCDGRRCPVD 147
>gi|229472319|gb|ACQ72674.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 190
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 78/157 (49%), Gaps = 22/157 (14%)
Query: 552 ELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMH 611
+ R + QA G ++GAD+ EL + + Y A+ + A + L G D+H
Sbjct: 11 DFRKLFQATPGQVMVGADLSGIELRMLA----HYLAR-YDAGRYAEVLLHG------DIH 59
Query: 612 SITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKGK 671
A +GISR+ K + YA +YGAG+ +L + ++P++++ +AK K +++ +
Sbjct: 60 QENADKIGISRKQVKTVTYAFLYGAGD---AKLGRSYDPQLNEKEAKRKGKEI------R 110
Query: 672 KLYRLKDGHLEELIKRVYSKYEAREV--CSAYNTSVD 706
+ Y LE L+ V SK E+ + C SVD
Sbjct: 111 QAYMDAVPGLETLVTAVKSKAESGYINLCDGRRCSVD 147
>gi|229472611|gb|ACQ72820.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 192
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 79/156 (50%), Gaps = 22/156 (14%)
Query: 553 LRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMHS 612
RA+ A GY+++GAD+ EL + + Y A+ G G + L+G D+H
Sbjct: 12 FRALFTASPGYAMVGADLAGIELRMLA----HYLARYDGGR-YGDVLLNG------DIHQ 60
Query: 613 ITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKGKK 672
A +GISR K + YA +YGAG++ ++ ++P++S+ DA ++ +++ ++
Sbjct: 61 ENADKIGISRRLVKTVTYAFLYGAGDK---KIGLSYDPQLSEKDATTEGKEI------RQ 111
Query: 673 LYRLKDGHLEELIKRVYSKYEAR--EVCSAYNTSVD 706
Y LE+ + V SK E+ ++C VD
Sbjct: 112 AYMDAIPGLEKRVTAVKSKAESGYIQLCDGRRCPVD 147
>gi|229472349|gb|ACQ72689.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 192
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 77/157 (49%), Gaps = 22/157 (14%)
Query: 552 ELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMH 611
E R + A GY ++GAD+ EL + + Y A+ G G + L+G D+H
Sbjct: 11 EFRKLFTASPGYVMVGADLAGIELRMLA----HYLARYDGGR-YGDVLLNG------DIH 59
Query: 612 SITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKGK 671
A +GISR K + YA +YGAG++ ++ ++P++S A +K +++ +
Sbjct: 60 QENADKIGISRRLVKTVTYAFLYGAGDK---KIGLSYDPQLSDKAATAKGKEI------R 110
Query: 672 KLYRLKDGHLEELIKRVYSKYEAR--EVCSAYNTSVD 706
+ Y LE+L+ V SK E+ ++C VD
Sbjct: 111 QAYMDATPGLEKLVTAVKSKAESGYIQLCDGRRCPVD 147
>gi|229472527|gb|ACQ72778.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 192
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 78/157 (49%), Gaps = 22/157 (14%)
Query: 552 ELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMH 611
E R + +A GY ++GAD+ EL + + Y A+ G G + L+G D+H
Sbjct: 11 EFRKLFRATPGYVMVGADLAGIELRMLA----HYLARYDGGR-YGDVLLNG------DIH 59
Query: 612 SITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKGK 671
A +GISR K + YA +YGAG++ ++ ++P++S A +K +++ +
Sbjct: 60 QENADKIGISRRLVKTVTYAFLYGAGDK---KIGLSYDPQLSDKAATAKGKEI------R 110
Query: 672 KLYRLKDGHLEELIKRVYSKYEAR--EVCSAYNTSVD 706
+ Y LE+L+ V SK E+ ++C VD
Sbjct: 111 QAYMDAIPGLEKLVTAVKSKAESGYIQLCDGRRCPVD 147
>gi|229472245|gb|ACQ72637.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 192
Score = 55.5 bits (132), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 77/156 (49%), Gaps = 22/156 (14%)
Query: 553 LRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMHS 612
RA+ A GY+++GAD+ EL + + Y A+ G G + L+G D+H
Sbjct: 12 FRALFTASPGYAMVGADLAGIELRMLA----HYLARYDGGR-YGDVLLNG------DIHQ 60
Query: 613 ITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKGKK 672
A +GISR K + YA +YGAG++ ++ ++P++S A K +++ ++
Sbjct: 61 ENADKIGISRRLVKTVTYAFLYGAGDK---KIGLSYDPQLSDKAATDKGKEI------RQ 111
Query: 673 LYRLKDGHLEELIKRVYSKYEAR--EVCSAYNTSVD 706
Y LE+L+ V SK E+ ++C VD
Sbjct: 112 AYMDAIPGLEKLVTAVKSKAESGYIQLCDGRRCPVD 147
>gi|32442295|gb|AAP82218.1| DNA polymerase [Podovirus SOG]
Length = 410
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 65/135 (48%), Gaps = 14/135 (10%)
Query: 506 VENIESEGRDYGVILPQLIVSGTLTRRAVEATWMTASNAVGERVGSELRAMIQAPDGYSI 565
++ +E +GR +G + V+G +T + +T+ + + G E+R+ P G+ +
Sbjct: 238 LDAVEDDGRVHGEVNSNGAVTGRMTHYSPNLGQVTSGSKI---YGPEMRSCWTVPQGHKL 294
Query: 566 IGADVDSQEL-WIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMHSITAKAVGI-SRE 623
+G D D EL +A + D + M G K TD H+ +A G+ SR+
Sbjct: 295 VGMDADGLELRMLAHYMNDPEYTR---------MVAEGDKDAGTDAHTANQRAAGLNSRD 345
Query: 624 HAKIINYARIYGAGE 638
AK YA +YGAG+
Sbjct: 346 DAKTFIYAFLYGAGD 360
>gi|229472231|gb|ACQ72630.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 192
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 77/156 (49%), Gaps = 22/156 (14%)
Query: 553 LRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMHS 612
RA+ A GY ++GAD+ EL + + Y A+ G G + L+G D+H
Sbjct: 12 FRALFTASPGYVMVGADLAGIELRMLA----HYLARYDGGG-YGDVLLNG------DIHQ 60
Query: 613 ITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKGKK 672
A +GISR K + YA +YGAG++ ++ ++P++S A +K +++ ++
Sbjct: 61 ENADKIGISRRLVKTVTYAFLYGAGDK---KIGLSYDPQLSDKAATAKGKEI------RQ 111
Query: 673 LYRLKDGHLEELIKRVYSKYEAR--EVCSAYNTSVD 706
Y LE+L+ V SK E+ ++C VD
Sbjct: 112 AYMDAIPGLEKLVTAVKSKAESGYIQLCDGRRCPVD 147
>gi|229472357|gb|ACQ72693.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 192
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 77/156 (49%), Gaps = 22/156 (14%)
Query: 553 LRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMHS 612
RA+ A GY ++GAD+ EL + + Y A+ G G + L+G D+H
Sbjct: 12 FRALFTASPGYVMVGADLAGIELRMLA----HYLARYDGGR-YGDVLLNG------DIHQ 60
Query: 613 ITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKGKK 672
A +GISR K + YA +YGAG++ ++ ++P++S A +K +++ ++
Sbjct: 61 ENADKIGISRRLVKTVTYAFLYGAGDK---KIGLSYDPQLSDKAATTKGKEI------RQ 111
Query: 673 LYRLKDGHLEELIKRVYSKYEAR--EVCSAYNTSVD 706
Y LE+L+ V SK E+ ++C VD
Sbjct: 112 AYMDAIPGLEKLVTAVKSKAESGYIQLCDGRRCPVD 147
>gi|291335303|gb|ADD94920.1| hypothetical protein DSY4361 [uncultured phage MedDCM-OCT-S01-C29]
Length = 478
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 73/158 (46%), Gaps = 22/158 (13%)
Query: 484 NHERVKKQFVVWLNKKDLPRRLVENIESEGRDYGVILPQLIVSGTLTRRAVEATWMTASN 543
H V + ++ W K + R+++ +I+ + R G + + G T R MT N
Sbjct: 171 GHHPVVQMYLNW-KKAEKRRQMITSIQEKMRPDGFVKASYMQLGAETGR------MTCFN 223
Query: 544 AVGERV--GSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLS 601
+++ + R ++AP G+ I+ AD EL +A+ + +
Sbjct: 224 PNNQQIPKDKQFRGCVEAPKGWLIVDADFGQMELRLAAAVAQDK-------------KMI 270
Query: 602 GQKSNATDMHSITAKAVGISREHAKIINYARIYGAGER 639
+ D+H++TA+A+G +R+ AK N+ +YG+G +
Sbjct: 271 QAFKDGEDLHTVTAEAIGCTRQIAKSANFGLLYGSGAK 308
>gi|229472363|gb|ACQ72696.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 192
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 77/156 (49%), Gaps = 22/156 (14%)
Query: 553 LRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMHS 612
RA+ A GY ++GAD+ EL + + Y A+ G G + L+G D+H
Sbjct: 12 FRALFTASPGYVMVGADLAGIELRMLA----HYLARYDGGR-YGDVLLNG------DIHQ 60
Query: 613 ITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKGKK 672
A +GISR K + YA +YGAG++ ++ ++P++S A +K +++ ++
Sbjct: 61 ENADKIGISRRLVKTVTYAFLYGAGDK---KIGLSYDPQLSDKAATTKGKEI------RQ 111
Query: 673 LYRLKDGHLEELIKRVYSKYEAR--EVCSAYNTSVD 706
Y LE+L+ V SK E+ ++C VD
Sbjct: 112 AYMDAIPGLEKLVTAVKSKAESGYIQLCDGRRCPVD 147
>gi|229472511|gb|ACQ72770.1| DNA polymerase [Uncultured T7-like podovirus]
gi|229472585|gb|ACQ72807.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 192
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 77/157 (49%), Gaps = 22/157 (14%)
Query: 552 ELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMH 611
E R + A GY ++GAD+ EL + + Y A+ G G + L+G D+H
Sbjct: 11 EFRKLFTASPGYVMVGADLAGIELRMLA----HYLARYDGGR-YGDVLLNG------DIH 59
Query: 612 SITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKGK 671
A +GISR K + YA +YGAG++ ++ ++P++S A +K +++ +
Sbjct: 60 QENADKIGISRRLVKTVTYAFLYGAGDK---KIGLSYDPQLSDKAATAKGKEI------R 110
Query: 672 KLYRLKDGHLEELIKRVYSKYEAR--EVCSAYNTSVD 706
+ Y LE+L+ V SK E+ ++C VD
Sbjct: 111 QAYMDAIPGLEKLVTAVKSKAESGYIQLCDGRRCPVD 147
>gi|229472343|gb|ACQ72686.1| DNA polymerase [Uncultured T7-like podovirus]
gi|229472583|gb|ACQ72806.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 192
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 77/156 (49%), Gaps = 22/156 (14%)
Query: 553 LRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMHS 612
RA+ A GY ++GAD+ EL + + Y A+ G G + L+G D+H
Sbjct: 12 FRALFTASPGYVMVGADLAGIELRMLA----HYLARYDGGR-YGDVLLNG------DIHQ 60
Query: 613 ITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKGKK 672
A +GISR K + YA +YGAG++ ++ ++P++S A +K +++ ++
Sbjct: 61 ENADKIGISRRLVKTVTYAFLYGAGDK---KIGLSYDPQLSDKAATAKGKEI------RQ 111
Query: 673 LYRLKDGHLEELIKRVYSKYEAR--EVCSAYNTSVD 706
Y LE+L+ V SK E+ ++C VD
Sbjct: 112 AYMDAIPGLEKLVTAVKSKAESGYIQLCDGRRCPVD 147
>gi|229472351|gb|ACQ72690.1| DNA polymerase [Uncultured T7-like podovirus]
gi|229472367|gb|ACQ72698.1| DNA polymerase [Uncultured T7-like podovirus]
gi|229472447|gb|ACQ72738.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 192
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 77/157 (49%), Gaps = 22/157 (14%)
Query: 552 ELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMH 611
E R + A GY ++GAD+ EL + + Y A+ G G + L+G D+H
Sbjct: 11 EFRKLFTASPGYVMVGADLAGIELRMLA----HYLARYDGGR-YGDVLLNG------DIH 59
Query: 612 SITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKGK 671
A +GISR K + YA +YGAG++ ++ ++P++S A +K +++ +
Sbjct: 60 QENADKIGISRRLVKTVTYAFLYGAGDK---KIGLSYDPQLSDKAATAKGKEI------R 110
Query: 672 KLYRLKDGHLEELIKRVYSKYEAR--EVCSAYNTSVD 706
+ Y LE+L+ V SK E+ ++C VD
Sbjct: 111 QAYMDAIPGLEKLVTAVKSKAESGYIQLCDGRRCPVD 147
>gi|229472253|gb|ACQ72641.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 192
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 77/157 (49%), Gaps = 22/157 (14%)
Query: 552 ELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMH 611
E R + A GY ++GAD+ EL + + Y A+ G G + L+G D+H
Sbjct: 11 EFRKLFTASPGYVMVGADLAGIELRMLA----HYLARYDGGR-YGDVLLNG------DIH 59
Query: 612 SITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKGK 671
A +GISR K + YA +YGAG++ ++ ++P++S A +K +++ +
Sbjct: 60 QENADKIGISRRLVKTVTYAFLYGAGDK---KIGLSYDPQLSDKAATAKGKEI------R 110
Query: 672 KLYRLKDGHLEELIKRVYSKYEAR--EVCSAYNTSVD 706
+ Y LE+L+ V SK E+ ++C VD
Sbjct: 111 QAYMDAIPGLEKLVTAVKSKAESGYIQLCDGRRCPVD 147
>gi|229472189|gb|ACQ72609.1| DNA polymerase [Uncultured T7-like podovirus]
gi|229472331|gb|ACQ72680.1| DNA polymerase [Uncultured T7-like podovirus]
gi|229472419|gb|ACQ72724.1| DNA polymerase [Uncultured T7-like podovirus]
gi|229472601|gb|ACQ72815.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 192
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 77/157 (49%), Gaps = 22/157 (14%)
Query: 552 ELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMH 611
E R + A GY ++GAD+ EL + + Y A+ G G + L+G D+H
Sbjct: 11 EFRKLFTASPGYVMVGADLAGIELRMLA----HYLARYDGGR-YGDVLLNG------DIH 59
Query: 612 SITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKGK 671
A +GISR K + YA +YGAG++ ++ ++P++S A +K +++ +
Sbjct: 60 QENADKIGISRRLVKTVTYAFLYGAGDK---KIGLSYDPQLSDKAATAKGKEI------R 110
Query: 672 KLYRLKDGHLEELIKRVYSKYEAR--EVCSAYNTSVD 706
+ Y LE+L+ V SK E+ ++C VD
Sbjct: 111 QAYMDAIPGLEKLVTAVKSKAESGYIQLCDGRRCPVD 147
>gi|229472173|gb|ACQ72601.1| DNA polymerase [Uncultured T7-like podovirus]
gi|229472401|gb|ACQ72715.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 192
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 77/157 (49%), Gaps = 22/157 (14%)
Query: 552 ELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMH 611
E R + A GY ++GAD+ EL + + Y A+ G G + L+G D+H
Sbjct: 11 EFRKLFTASPGYVMVGADLAGIELRMLA----HYLARYDGGR-YGDVLLNG------DIH 59
Query: 612 SITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKGK 671
A +GISR K + YA +YGAG++ ++ ++P++S A +K +++ +
Sbjct: 60 QENADKIGISRRLVKTVTYAFLYGAGDK---KIGLSYDPQLSDKAATAKGKEI------R 110
Query: 672 KLYRLKDGHLEELIKRVYSKYEAR--EVCSAYNTSVD 706
+ Y LE+L+ V SK E+ ++C VD
Sbjct: 111 QAYMDAIPGLEKLVTAVKSKAESGYIQLCDGRRCPVD 147
>gi|229472241|gb|ACQ72635.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 192
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 77/157 (49%), Gaps = 22/157 (14%)
Query: 552 ELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMH 611
E R + A GY ++GAD+ EL + + Y A+ G G + L+G D+H
Sbjct: 11 EFRKLFTASPGYVMVGADLAGIELRMLA----HYLARYDGGR-YGDVLLNG------DIH 59
Query: 612 SITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKGK 671
A +GISR K + YA +YGAG++ ++ ++P++S A +K +++ +
Sbjct: 60 QENADKIGISRRLVKTVTYAFLYGAGDK---KIGLSYDPQLSDKAATAKGKEI------R 110
Query: 672 KLYRLKDGHLEELIKRVYSKYEAR--EVCSAYNTSVD 706
+ Y LE+L+ V SK E+ ++C VD
Sbjct: 111 QAYMDAIPGLEKLVTAVKSKAESGYIQLCDGRRCPVD 147
>gi|229472215|gb|ACQ72622.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 192
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 77/156 (49%), Gaps = 22/156 (14%)
Query: 553 LRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMHS 612
RA+ A GY ++GAD+ EL + + Y A+ G G + L+G D+H
Sbjct: 12 FRALFTASPGYVMVGADLAGIELRMLA----HYLARYDGGR-YGDVLLNG------DIHQ 60
Query: 613 ITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKGKK 672
A +GISR K + YA +YGAG++ ++ ++P++S A +K +++ ++
Sbjct: 61 ENADKIGISRRLVKTVTYAFLYGAGDK---KIGLSYDPQLSDKAATAKGKEI------RQ 111
Query: 673 LYRLKDGHLEELIKRVYSKYEAR--EVCSAYNTSVD 706
Y LE+L+ V SK E+ ++C VD
Sbjct: 112 AYMDAIPGLEKLVTAVKSKAESGYIQLCDGRRCPVD 147
>gi|229472457|gb|ACQ72743.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 192
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 77/157 (49%), Gaps = 22/157 (14%)
Query: 552 ELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMH 611
E R + A GY ++GAD+ EL + + Y A+ G G + L+G D+H
Sbjct: 11 EFRKLFTASPGYVMVGADLAGIELRMLA----HYLARYDGGR-YGDVLLNG------DIH 59
Query: 612 SITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKGK 671
A +GISR K + YA +YGAG++ ++ ++P++S A +K +++ +
Sbjct: 60 QENADKIGISRRLVKTVTYAFLYGAGDK---KIGLSYDPQLSDKAATAKGKEI------R 110
Query: 672 KLYRLKDGHLEELIKRVYSKYEAR--EVCSAYNTSVD 706
+ Y LE+L+ V SK E+ ++C VD
Sbjct: 111 QAYMDAIPGLEKLVTAVKSKAESGYIQLCDGRRCPVD 147
>gi|229472561|gb|ACQ72795.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 192
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 77/157 (49%), Gaps = 22/157 (14%)
Query: 552 ELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMH 611
E R + A GY ++GAD+ EL + + Y A+ G G + L+G D+H
Sbjct: 11 EFRKLFTASPGYVMVGADLAGIELRMLA----HYLARYDGGR-YGDVLLNG------DIH 59
Query: 612 SITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKGK 671
A +GISR K + YA +YGAG++ ++ ++P++S A +K +++ +
Sbjct: 60 QENADKIGISRRLVKTVTYAFLYGAGDK---KIGLSYDPQLSDKVATAKGKEI------R 110
Query: 672 KLYRLKDGHLEELIKRVYSKYEAR--EVCSAYNTSVD 706
+ Y LE+L+ V SK E+ ++C VD
Sbjct: 111 QAYMDAIPGLEKLVTAVKSKAESGYIQLCDGRRCPVD 147
>gi|229472593|gb|ACQ72811.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 190
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 77/157 (49%), Gaps = 22/157 (14%)
Query: 552 ELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMH 611
E R + A GY ++GAD+ EL + + Y A+ G G + L+G D+H
Sbjct: 9 EFRKLFTASPGYVMVGADLAGIELRMLA----HYLARYDGGR-YGDVLLNG------DIH 57
Query: 612 SITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKGK 671
A +GISR K + YA +YGAG++ ++ ++P++S A +K +++ +
Sbjct: 58 QENADKIGISRRLVKTVTYAFLYGAGDK---KIGLSYDPQLSDKAATAKGKEI------R 108
Query: 672 KLYRLKDGHLEELIKRVYSKYEAR--EVCSAYNTSVD 706
+ Y LE+L+ V SK E+ ++C VD
Sbjct: 109 QAYMDAIPGLEKLVTAVKSKAESGYIQLCDGRRCPVD 145
>gi|229472255|gb|ACQ72642.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 190
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 79/158 (50%), Gaps = 22/158 (13%)
Query: 551 SELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDM 610
+E R + +A ++GAD+ EL + + Y A+ + + L+G D+
Sbjct: 10 AEFRKLFRASPTLVMVGADLAGIELRMLA----HYLAR-YDEGRYADVLLNG------DI 58
Query: 611 HSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKG 670
H A +GISR+ K + YA +YGAG+ +L + ++P++S+ DAK K +++
Sbjct: 59 HQENADKIGISRKQVKTVTYAFLYGAGD---AKLGRSYDPQLSEKDAKKKGKEI------ 109
Query: 671 KKLYRLKDGHLEELIKRVYSKYEAREV--CSAYNTSVD 706
++ Y LE+L+ V SK E+ + C SVD
Sbjct: 110 RQAYMDAVPGLEKLVTAVKSKAESGYINLCDGRRCSVD 147
>gi|262212405|gb|ACY35819.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 193
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 60/113 (53%), Gaps = 14/113 (12%)
Query: 552 ELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMH 611
E R + A GY ++GAD+ EL + + Y A+ G G + L+G D+H
Sbjct: 11 EFRKLFTASSGYVMVGADLAGIELRMLA----HYLARYDGGR-YGDVLLNG------DIH 59
Query: 612 SITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKM 664
+ A +GISR K + YA +YGAG++ ++ ++P++S A +K +++
Sbjct: 60 QVNADKIGISRRLVKTVTYAFLYGAGDK---KIGLSYDPQLSDKAATAKGKEI 109
>gi|229472337|gb|ACQ72683.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 192
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 76/156 (48%), Gaps = 22/156 (14%)
Query: 553 LRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMHS 612
RA+ A GY ++GAD+ EL + + Y A+ G G + L+G D+H
Sbjct: 12 FRALFTASPGYVMVGADLAGIELRMLA----HYLARYDGGR-YGDVLLNG------DIHQ 60
Query: 613 ITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKGKK 672
A +GISR K + YA +YGAG++ ++ ++P++S A +K +++ ++
Sbjct: 61 ENADKIGISRRLVKTVTYAFLYGAGDK---KIGLSYDPQLSDKAATTKGKEI------RQ 111
Query: 673 LYRLKDGHLEELIKRVYSKYEAREV--CSAYNTSVD 706
Y LE+L+ V SK E+ + C VD
Sbjct: 112 AYMDAIPGLEKLVTAVKSKAESGYIRLCDGRRCPVD 147
>gi|229472373|gb|ACQ72701.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 192
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 77/157 (49%), Gaps = 22/157 (14%)
Query: 552 ELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMH 611
E R + A GY ++GAD+ EL + + Y A+ G G + L+G D+H
Sbjct: 11 EFRKLFTASPGYVMVGADLAGIELRMLA----HYLARYDGGR-YGDVLLNG------DIH 59
Query: 612 SITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKGK 671
A +GISR K + YA +YGAG++ ++ ++P++S A +K +++ +
Sbjct: 60 QENADKIGISRRLVKTVTYAFLYGAGDK---KIGLSYDPQLSDKAATAKGKEI------R 110
Query: 672 KLYRLKDGHLEELIKRVYSKYEAR--EVCSAYNTSVD 706
+ Y LE+L+ V SK ++ ++C VD
Sbjct: 111 QAYMDAIPGLEKLVTAVKSKAQSGYIQLCDGRRCPVD 147
>gi|297180888|gb|ADI17092.1| DNA polymerase I - 3'-5' exonuclease and polymerase domains
[uncultured gamma proteobacterium HF0070_03O15]
Length = 454
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 74/149 (49%), Gaps = 21/149 (14%)
Query: 491 QFVVWLNKKDLPRRLVENIESEGRDYGVILPQLIVSGTLTRRAVEATWMTASNAVGERV- 549
Q ++ +++ R+++E+I+ + + G + + G T R M++ +++
Sbjct: 159 QTLMTWKRREKRRQMIESIQDKMSNDGFVRASYMQLGADTGR------MSSIKPNNQQIP 212
Query: 550 -GSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNAT 608
SE R +QAP G+ I+ AD EL +A+ + AK+ MT + Q+
Sbjct: 213 RDSEFRQCVQAPQGWKIVDADFSQMELRLAAAL-----AKDKN------MTAAFQR--GE 259
Query: 609 DMHSITAKAVGISREHAKIINYARIYGAG 637
D+H TA+ +G R+ AK N+ +YGAG
Sbjct: 260 DLHDYTAEQMGCDRQIAKSANFGLLYGAG 288
>gi|229472533|gb|ACQ72781.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 192
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 77/156 (49%), Gaps = 22/156 (14%)
Query: 553 LRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMHS 612
RA+ A GY ++GAD+ EL + + Y A+ G G + L+G D+H
Sbjct: 12 FRALFTASPGYVMVGADLAGIELRMLA----HYLARYDGGR-YGDVLLNG------DIHQ 60
Query: 613 ITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKGKK 672
A +GISR K + YA +YGAG++ ++ ++P++S A +K +++ ++
Sbjct: 61 ENADKIGISRRLVKTVTYAFLYGAGDK---KIGLSYDPQLSDKAATAKGKEI------RQ 111
Query: 673 LYRLKDGHLEELIKRVYSKYEAR--EVCSAYNTSVD 706
Y LE+L+ V S+ E+ ++C VD
Sbjct: 112 AYMDAIPGLEKLVTAVKSEAESGYIQLCDGRRCPVD 147
>gi|229472607|gb|ACQ72818.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 190
Score = 53.1 bits (126), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 77/158 (48%), Gaps = 22/158 (13%)
Query: 551 SELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDM 610
+E R + +A G ++GAD+ EL + + Y A+ + + L G D+
Sbjct: 10 AEFRRLFKASPGQIMVGADLSGIELRMLA----HYLAR-YDEGRYADVLLHG------DI 58
Query: 611 HSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKG 670
H A +GISR K + YA +YGAG+ +L K ++ ++S+S AK K +++
Sbjct: 59 HQENADKIGISRRQVKTVTYAFLYGAGD---AKLGKSYDAQLSESQAKKKGKEI------ 109
Query: 671 KKLYRLKDGHLEELIKRVYSKYEAR--EVCSAYNTSVD 706
++ Y LE+L+ V SK E+ +C SVD
Sbjct: 110 RQAYMDAVPGLEKLVTAVKSKAESGFINLCDGRRCSVD 147
>gi|345893814|ref|ZP_08844606.1| hypothetical protein HMPREF1022_03266 [Desulfovibrio sp.
6_1_46AFAA]
gi|345045850|gb|EGW49749.1| hypothetical protein HMPREF1022_03266 [Desulfovibrio sp.
6_1_46AFAA]
Length = 576
Score = 53.1 bits (126), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 110/266 (41%), Gaps = 37/266 (13%)
Query: 440 EHLNVGNPLSRDFINK-----FSDNSLAGVDIGAKRIIE-ISRMLSYWRNNHERVKKQFV 493
EH NP SR+ I + F A D G ++ E + + L Y K V
Sbjct: 270 EHFETFNPNSREQIARRLREQFGWQPGAFTDTGQPQVDEDVLKGLPY------PPCKPLV 323
Query: 494 VWLNKKDLPRRLVENIES------EGRDYGVILPQLIVSGTLTRRAVEATWMTASNAVGE 547
+L + L E +GR +G ++I +G +T R + A
Sbjct: 324 EYLELAKIIGMLAEGTNGWLKLVRKGRIHG----RVITNGAVTGRCTHSRPNLAQIPAHG 379
Query: 548 RVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAK-EHGATPLGWMTLSGQKSN 606
G + RA+ AP G ++GAD EL + + Y A+ +HGA G + L G
Sbjct: 380 TYGKDCRALFAAPQGTVMVGADASGLELRMLA----HYMARYDHGA--YGRIILEG---- 429
Query: 607 ATDMHSITAKAVGI-SREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMY 665
D+H+ KA G+ +R++AK YA +YGAG+ ++ +++ + R +
Sbjct: 430 --DIHTENQKAAGLETRDNAKTFIYAFMYGAGDAKLGSIVAPLATPAAQARRGTALRAKF 487
Query: 666 TLTKGKKLYRLKDGHLEELIKRVYSK 691
L L RL D L +R Y K
Sbjct: 488 -LWAIPALKRLTDAVQAALAQRPYLK 512
>gi|229472291|gb|ACQ72660.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 190
Score = 53.1 bits (126), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 77/158 (48%), Gaps = 22/158 (13%)
Query: 551 SELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDM 610
+E R + +A G ++GAD+ EL + + Y A+ + + L G D+
Sbjct: 10 AEFRKLFKASPGQIMVGADLSGIELRMLA----HYLAR-YDEGRYASILLHG------DI 58
Query: 611 HSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKG 670
H A +GISR K + YA +YGAG+ +L K ++ ++S+S AK K +++
Sbjct: 59 HQENADKIGISRRQVKTVTYAFLYGAGD---AKLGKSYDAQLSESQAKKKGKEI------ 109
Query: 671 KKLYRLKDGHLEELIKRVYSKYEAR--EVCSAYNTSVD 706
++ Y LE+L+ V SK E+ +C +VD
Sbjct: 110 RQAYMDAVPGLEKLVTAVKSKAESGFINLCDGRRCTVD 147
>gi|229472211|gb|ACQ72620.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 190
Score = 53.1 bits (126), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 77/158 (48%), Gaps = 22/158 (13%)
Query: 551 SELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDM 610
+E R + +A G ++GAD+ EL + + Y A+ + + L G D+
Sbjct: 10 AEFRKLFKASPGQIMVGADLSGIELRMLA----HYLAR-YDEGRYASILLHG------DI 58
Query: 611 HSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKG 670
H A +GISR K + YA +YGAG+ +L K ++ ++++S AK K +++
Sbjct: 59 HQENADKIGISRRQVKTVTYAFLYGAGD---AKLGKSYDAQLTESQAKKKGKEI------ 109
Query: 671 KKLYRLKDGHLEELIKRVYSKYEAR--EVCSAYNTSVD 706
++ Y LE+L+ V SK E+ +C SVD
Sbjct: 110 RQAYMDAVPGLEKLVTAVKSKAESGFINLCDGRRCSVD 147
>gi|229472431|gb|ACQ72730.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 190
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 77/158 (48%), Gaps = 22/158 (13%)
Query: 551 SELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDM 610
+E R + +A G ++GAD+ EL + + Y A+ + + L G D+
Sbjct: 10 AEFRRLFKASPGQIMVGADLSGIELRMLA----HYLAR-YDEGRYASILLHG------DI 58
Query: 611 HSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKG 670
H A +GISR K + YA +YGAG+ +L K ++ ++S+S AK K +++
Sbjct: 59 HQENADKIGISRRQVKTVTYAFLYGAGD---AKLGKSYDAQLSESQAKKKGKEI------ 109
Query: 671 KKLYRLKDGHLEELIKRVYSKYEAR--EVCSAYNTSVD 706
++ Y LE+L+ V SK E+ +C +VD
Sbjct: 110 RQAYMDAVPGLEKLVTAVKSKAESGFINLCDGRRCTVD 147
>gi|262342311|gb|ACY54666.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 193
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 59/113 (52%), Gaps = 14/113 (12%)
Query: 552 ELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMH 611
E R + A GY ++GAD+ EL + + Y A+ G G + LSG D+H
Sbjct: 11 EFRKLFTASSGYVMVGADLAGIELRMLA----HYLARYDGGR-YGDVLLSG------DIH 59
Query: 612 SITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKM 664
A +GISR K + YA +YGAG++ ++ ++P++S A +K +++
Sbjct: 60 QENADKIGISRRLVKTVTYAFLYGAGDK---KIGLSYDPQLSDKAATAKGKEI 109
>gi|229472377|gb|ACQ72703.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 192
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 77/157 (49%), Gaps = 22/157 (14%)
Query: 552 ELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMH 611
E R + A GY ++GAD+ EL + + Y A+ G G + L+G D+H
Sbjct: 11 EFRKLFTASPGYVMVGADLAGIELRMLA----HYLARYDGGR-YGDVLLNG------DIH 59
Query: 612 SITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKGK 671
A +G+SR K + YA +YGAG++ ++ ++P++S A +K +++ +
Sbjct: 60 QENADKIGMSRRLVKTVTYAFLYGAGDK---KIGLSYDPQLSDKAATAKDKEI------R 110
Query: 672 KLYRLKDGHLEELIKRVYSKYEAR--EVCSAYNTSVD 706
+ Y LE+L+ V SK E+ ++C VD
Sbjct: 111 QAYMDAIPGLEKLVTAVKSKAESGYIQLCDGRRCPVD 147
>gi|229472441|gb|ACQ72735.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 192
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 77/158 (48%), Gaps = 22/158 (13%)
Query: 551 SELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDM 610
+E R + A G ++GAD+ EL + + Y A+ + + L+G D+
Sbjct: 10 AEFRQLFTATPGLVMVGADLAGIELRMLA----HYLAR-YDEGRYADILLNG------DI 58
Query: 611 HSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKG 670
H A +GISR K + YA +YGAG+ +L + ++P++++ +AK K +++
Sbjct: 59 HQENADKIGISRRQVKTVTYAFLYGAGD---AKLGRSYDPQLAEKEAKRKGKEI------ 109
Query: 671 KKLYRLKDGHLEELIKRVYSKYEAREV--CSAYNTSVD 706
++ Y LE+L+ V SK E + C SVD
Sbjct: 110 RQAYMDAVPGLEKLVSAVKSKAECGYINLCDGRRCSVD 147
>gi|229472289|gb|ACQ72659.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 190
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 77/158 (48%), Gaps = 22/158 (13%)
Query: 551 SELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDM 610
+E R + +A G ++GAD+ EL + + Y A+ + + L G D+
Sbjct: 10 AEFRRLFKASPGQIMVGADLSGIELRMLA----HYLAR-YDEGRYADVLLHG------DI 58
Query: 611 HSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKG 670
H A +GISR K + YA +YGAG+ +L K ++ ++S+S AK K +++
Sbjct: 59 HQENADKIGISRRQVKTVTYAFLYGAGD---AKLGKSYDAQLSESQAKKKGKEI------ 109
Query: 671 KKLYRLKDGHLEELIKRVYSKYEAR--EVCSAYNTSVD 706
++ Y LE+L+ V SK E+ +C +VD
Sbjct: 110 RQAYMDAVPGLEKLVTAVKSKAESGFINLCDGRRCTVD 147
>gi|262212403|gb|ACY35818.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 193
Score = 52.4 bits (124), Expect = 0.001, Method: Composition-based stats.
Identities = 34/113 (30%), Positives = 59/113 (52%), Gaps = 14/113 (12%)
Query: 552 ELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMH 611
E R + A GY ++GAD+ EL + + Y A+ G G + L+G D+H
Sbjct: 11 EFRKLFTASSGYVMVGADLAGIELRMLA----HYLARYDGGR-YGDVLLNG------DIH 59
Query: 612 SITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKM 664
A +GISR K + YA +YGAG++ ++ ++P++S A +K +++
Sbjct: 60 QENADKIGISRRLVKTVAYAFLYGAGDK---KIGLSYDPQLSDKAATAKGKEI 109
>gi|262212359|gb|ACY35796.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 193
Score = 52.4 bits (124), Expect = 0.001, Method: Composition-based stats.
Identities = 34/113 (30%), Positives = 59/113 (52%), Gaps = 14/113 (12%)
Query: 552 ELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMH 611
E R + A GY ++GAD+ EL + + Y A+ G G + L+G D+H
Sbjct: 11 EFRKLFTASSGYVMVGADLAGIELRMLA----HYLARYDGGR-YGDVLLNG------DIH 59
Query: 612 SITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKM 664
A +GISR K + YA +YGAG++ ++ ++P++S A +K +++
Sbjct: 60 QENADKIGISRRLVKTVAYAFLYGAGDK---KIGLSYDPQLSDKAATAKGKEI 109
>gi|229472219|gb|ACQ72624.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 190
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 77/158 (48%), Gaps = 22/158 (13%)
Query: 551 SELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDM 610
+E R + +A G ++GAD+ EL + + Y A+ + + L G D+
Sbjct: 10 AEFRRLFKASPGQIMVGADLSGIELRMLA----HYLAR-YDEGRYADVLLHG------DI 58
Query: 611 HSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKG 670
H A +GISR K + YA +YGAG+ +L K ++ ++S+S AK K +++
Sbjct: 59 HQENADKIGISRRQVKTVTYAFLYGAGD---AKLGKSYDAQLSESQAKKKGKEI------ 109
Query: 671 KKLYRLKDGHLEELIKRVYSKYEAR--EVCSAYNTSVD 706
++ Y LE+L+ V SK E+ +C +VD
Sbjct: 110 RQAYMDAVPGLEKLVTAVKSKAESGFINLCDGRRCTVD 147
>gi|262342093|gb|ACY54557.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 190
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 76/158 (48%), Gaps = 22/158 (13%)
Query: 551 SELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDM 610
+ R + A G ++GAD+ EL + + Y A+ + + L G D+
Sbjct: 10 ANFRKLFTATPGQVMVGADLSGIELRMLA----HYLAR-YDEGRYASILLHG------DI 58
Query: 611 HSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKG 670
H A +GISR K + YA +YGAG+ +L + ++P++S+ AK K +++
Sbjct: 59 HQENADKIGISRRQVKTVTYAFLYGAGD---SKLGRSYDPQLSEQQAKKKGKEI------ 109
Query: 671 KKLYRLKDGHLEELIKRVYSKYEAREV--CSAYNTSVD 706
++ Y LE+L+ V SK E+ + C + +VD
Sbjct: 110 RQAYMDAVPGLEKLVTAVKSKAESGYINLCDSRRCTVD 147
>gi|262342283|gb|ACY54652.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 193
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 59/113 (52%), Gaps = 14/113 (12%)
Query: 552 ELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMH 611
E R + A GY ++GAD+ EL + + Y A+ G G + L+G D+H
Sbjct: 11 EFRKLFTASSGYVMVGADLAGIELRMLA----HYLARYDGGR-YGDVLLNG------DIH 59
Query: 612 SITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKM 664
A +GISR K + YA +YGAG++ ++ ++P++S A +K +++
Sbjct: 60 QENADKIGISRRLVKTVTYAFLYGAGDK---KIGLSYDPQLSDKAATAKGKEI 109
>gi|262212383|gb|ACY35808.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 193
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 59/113 (52%), Gaps = 14/113 (12%)
Query: 552 ELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMH 611
E R + A GY ++GAD+ EL + + Y A+ G G + L+G D+H
Sbjct: 11 EFRKLFTASSGYVMVGADLAGIELRMLA----HYLARYDGGR-YGDVLLNG------DIH 59
Query: 612 SITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKM 664
A +GISR K + YA +YGAG++ ++ ++P++S A +K +++
Sbjct: 60 QENADKIGISRRLVKTVTYAFLYGAGDK---KIGLSYDPQLSDKAATAKGKEI 109
>gi|262342295|gb|ACY54658.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 193
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 59/113 (52%), Gaps = 14/113 (12%)
Query: 552 ELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMH 611
E R + A GY ++GAD+ EL + + Y A+ G G + L+G D+H
Sbjct: 11 EFRKLFTASSGYVMVGADLAGIELRMLA----HYLARYDGGR-YGDVLLNG------DIH 59
Query: 612 SITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKM 664
A +GISR K + YA +YGAG++ ++ ++P++S A +K +++
Sbjct: 60 QENADKIGISRRLVKTVTYAFLYGAGDK---KIGLSYDPQLSDKAATAKGKEI 109
>gi|262212385|gb|ACY35809.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 193
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 59/113 (52%), Gaps = 14/113 (12%)
Query: 552 ELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMH 611
E R + A GY ++GAD+ EL + + Y A+ G G + L+G D+H
Sbjct: 11 EFRKLFTASSGYVMVGADLAGIELRMLA----HYLARYDGGR-YGDVLLNG------DIH 59
Query: 612 SITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKM 664
A +GISR K + YA +YGAG++ ++ ++P++S A +K +++
Sbjct: 60 QENADKIGISRRLVKTVTYAFLYGAGDK---KIGLSYDPQLSDKAATAKGKEI 109
>gi|262212391|gb|ACY35812.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 193
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 59/113 (52%), Gaps = 14/113 (12%)
Query: 552 ELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMH 611
E R + A GY ++GAD+ EL + + Y A+ G G + L+G D+H
Sbjct: 11 EFRKLFTASSGYVMVGADLAGIELRMLA----HYLARYDGGR-YGDVLLNG------DIH 59
Query: 612 SITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKM 664
A +GISR K + YA +YGAG++ ++ ++P++S A +K +++
Sbjct: 60 QENADKIGISRRLVKTVTYAFLYGAGDK---KIGLSYDPQLSDKAATAKGKEI 109
>gi|374427276|gb|AEZ50178.1| DNA polymerase, partial [Cyanophage S-TIM50]
gi|374427278|gb|AEZ50179.1| DNA polymerase, partial [Cyanophage S-TIM52]
Length = 98
Score = 51.6 bits (122), Expect = 0.002, Method: Composition-based stats.
Identities = 27/81 (33%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Query: 743 RLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLVCMRWLVSR---DTRFVISIHDE 799
++S A P S D F R NW +QS LH + M WL+ + +F +S+HD
Sbjct: 3 KMSTAFRPSSVGDD-FWTMRNNWCIQSTGSAMLHAFMAAMEWLIKDHGLNAKFNMSVHDS 61
Query: 800 IRYLVPDEEKYETALALHVTN 820
I Y+ P EE + A V +
Sbjct: 62 ILYMCPKEEAEKVAALFQVAH 82
>gi|229472461|gb|ACQ72745.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 190
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 77/158 (48%), Gaps = 22/158 (13%)
Query: 551 SELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDM 610
+E R + +A G ++GAD+ EL + + Y A+ + + L G D+
Sbjct: 10 AEFRRLFKASPGQIMVGADLSGIELRMLA----HYLAR-YDEGRYADVLLHG------DI 58
Query: 611 HSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKG 670
H A +GISR K + YA +YGAG+ +L K F+ ++++S AK K +++
Sbjct: 59 HQENADKIGISRRAVKTVTYAFLYGAGD---AKLGKSFDAQLTESQAKKKGKEI------ 109
Query: 671 KKLYRLKDGHLEELIKRVYSKYEAREV--CSAYNTSVD 706
++ Y LE+L+ V SK E+ + C +VD
Sbjct: 110 RQAYMDAVPGLEKLVTAVKSKAESGYINLCDGRRCAVD 147
>gi|229472559|gb|ACQ72794.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 172
Score = 51.6 bits (122), Expect = 0.002, Method: Composition-based stats.
Identities = 42/147 (28%), Positives = 73/147 (49%), Gaps = 22/147 (14%)
Query: 562 GYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMHSITAKAVGIS 621
GY ++GAD+ EL + + Y A+ G G + L+G D+H A +GIS
Sbjct: 1 GYVMVGADLAGIELRMLA----HYLARYDGGR-YGDVLLNG------DIHQENADKIGIS 49
Query: 622 REHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKGKKLYRLKDGHL 681
R K + YA +YGAG++ ++ ++P++S A +K +++ ++ Y L
Sbjct: 50 RRLVKTVTYAFLYGAGDK---KIGLSYDPQLSDKAATAKGKEI------RQAYMDAIPGL 100
Query: 682 EELIKRVYSKYEAR--EVCSAYNTSVD 706
E+L+ V SK E+ ++C VD
Sbjct: 101 EKLVTAVKSKAESGYIQLCDGRRCPVD 127
>gi|262342279|gb|ACY54650.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 193
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 59/113 (52%), Gaps = 14/113 (12%)
Query: 552 ELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMH 611
E R + A GY ++GAD+ EL + + Y A+ G G + L+G D+H
Sbjct: 11 EFRKLFTASSGYVMVGADLAGIELRMLA----HYLARYDGGR-YGDVLLNG------DIH 59
Query: 612 SITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKM 664
A +GISR K + YA +YGAG++ ++ ++P++S A +K +++
Sbjct: 60 QENADKIGISRRLVKTVTYAFLYGAGDK---KIGLSYDPQLSDKAATAKGKEI 109
>gi|262212357|gb|ACY35795.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 193
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 59/113 (52%), Gaps = 14/113 (12%)
Query: 552 ELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMH 611
E R + A GY ++GAD+ EL + + Y A+ G G + L+G D+H
Sbjct: 11 EFRKLFTASSGYVMVGADLAGIELRMLA----HYLARYDGGR-YGDVLLNG------DIH 59
Query: 612 SITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKM 664
A +GISR K + YA +YGAG++ ++ ++P++S A +K +++
Sbjct: 60 QENADKIGISRRLVKTVTYAFLYGAGDK---KIGLSYDPQLSDKAATAKGKEI 109
>gi|229472209|gb|ACQ72619.1| DNA polymerase [Uncultured T7-like podovirus]
gi|229472325|gb|ACQ72677.1| DNA polymerase [Uncultured T7-like podovirus]
gi|229472333|gb|ACQ72681.1| DNA polymerase [Uncultured T7-like podovirus]
gi|229472437|gb|ACQ72733.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 190
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 77/158 (48%), Gaps = 22/158 (13%)
Query: 551 SELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDM 610
+E R + +A G ++GAD+ EL + + Y A+ + + L G D+
Sbjct: 10 AEFRKLFKASPGQIMVGADLSGIELRMLA----HYLAR-YDEGRYADVLLHG------DI 58
Query: 611 HSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKG 670
H A +GISR K + YA +YGAG+ +L K ++ ++++S AK K +++
Sbjct: 59 HQENADKIGISRRAVKTVTYAFLYGAGD---AKLGKSYDAQLTESQAKKKGKEI------ 109
Query: 671 KKLYRLKDGHLEELIKRVYSKYEAR--EVCSAYNTSVD 706
++ Y LE+L+ V SK E+ +C SVD
Sbjct: 110 RQAYMDAVPGLEKLVTAVKSKAESGFINLCDGRRCSVD 147
>gi|262342269|gb|ACY54645.1| DNA polymerase [Uncultured T7-like podovirus]
gi|262342289|gb|ACY54655.1| DNA polymerase [Uncultured T7-like podovirus]
gi|262342317|gb|ACY54669.1| DNA polymerase [Uncultured T7-like podovirus]
gi|262342319|gb|ACY54670.1| DNA polymerase [Uncultured T7-like podovirus]
gi|262342323|gb|ACY54672.1| DNA polymerase [Uncultured T7-like podovirus]
gi|262342325|gb|ACY54673.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 193
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 59/113 (52%), Gaps = 14/113 (12%)
Query: 552 ELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMH 611
E R + A GY ++GAD+ EL + + Y A+ G G + L+G D+H
Sbjct: 11 EFRKLFTASSGYVMVGADLAGIELRMLA----HYLARYDGGR-YGDVLLNG------DIH 59
Query: 612 SITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKM 664
A +GISR K + YA +YGAG++ ++ ++P++S A +K +++
Sbjct: 60 QENADKIGISRRLVKTVTYAFLYGAGDK---KIGLSYDPQLSDKAATAKGKEI 109
>gi|262212399|gb|ACY35816.1| DNA polymerase [Uncultured T7-like podovirus]
gi|262342299|gb|ACY54660.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 193
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 59/113 (52%), Gaps = 14/113 (12%)
Query: 552 ELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMH 611
E R + A GY ++GAD+ EL + + Y A+ G G + L+G D+H
Sbjct: 11 EFRKLFTASSGYVMVGADLAGIELRMLA----HYLARYDGGR-YGDVLLNG------DIH 59
Query: 612 SITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKM 664
A +GISR K + YA +YGAG++ ++ ++P++S A +K +++
Sbjct: 60 QENADKIGISRRLVKTVTYAFLYGAGDK---KIGLSYDPQLSDKAATAKGKEI 109
>gi|262212361|gb|ACY35797.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 192
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 59/113 (52%), Gaps = 14/113 (12%)
Query: 552 ELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMH 611
E R + A GY ++GAD+ EL + + Y A+ G G + L+G D+H
Sbjct: 11 EFRKLFTASSGYVMVGADLAGIELRMLA----HYLARYDGGR-YGDVLLNG------DIH 59
Query: 612 SITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKM 664
A +GISR K + YA +YGAG++ ++ ++P++S A +K +++
Sbjct: 60 QENADKIGISRRLVKTVTYAFLYGAGDK---KIGLSYDPQLSDKAATAKGKEI 109
>gi|262212387|gb|ACY35810.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 193
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 59/113 (52%), Gaps = 14/113 (12%)
Query: 552 ELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMH 611
E R + A GY ++GAD+ EL + + Y A+ G G + L+G D+H
Sbjct: 11 EFRKLFTASSGYVMVGADLAGIELRMLA----HYLARYDGGR-YGDVLLNG------DIH 59
Query: 612 SITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKM 664
A +GISR K + YA +YGAG++ ++ ++P++S A +K +++
Sbjct: 60 QENADKIGISRRLVKTVTYAFLYGAGDK---KIGLSYDPQLSDKAATAKGKEI 109
>gi|262342099|gb|ACY54560.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 193
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 59/113 (52%), Gaps = 14/113 (12%)
Query: 552 ELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMH 611
E R + A GY ++GAD+ EL + + Y A+ G G + L+G D+H
Sbjct: 11 EFRKLFTASSGYVMVGADLAGIELRMLA----HYLARYDGGR-YGDVLLNG------DIH 59
Query: 612 SITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKM 664
A +GISR K + YA +YGAG++ ++ ++P++S A +K +++
Sbjct: 60 QENADKIGISRRLVKTVTYAFLYGAGDK---KIGLSYDPQLSDKAATAKGKEI 109
>gi|262212363|gb|ACY35798.1| DNA polymerase [Uncultured T7-like podovirus]
gi|262212401|gb|ACY35817.1| DNA polymerase [Uncultured T7-like podovirus]
gi|262212413|gb|ACY35823.1| DNA polymerase [Uncultured T7-like podovirus]
gi|262212415|gb|ACY35824.1| DNA polymerase [Uncultured T7-like podovirus]
gi|262342105|gb|ACY54563.1| DNA polymerase [Uncultured T7-like podovirus]
gi|262342275|gb|ACY54648.1| DNA polymerase [Uncultured T7-like podovirus]
gi|262342277|gb|ACY54649.1| DNA polymerase [Uncultured T7-like podovirus]
gi|262342281|gb|ACY54651.1| DNA polymerase [Uncultured T7-like podovirus]
gi|262342287|gb|ACY54654.1| DNA polymerase [Uncultured T7-like podovirus]
gi|262342291|gb|ACY54656.1| DNA polymerase [Uncultured T7-like podovirus]
gi|262342293|gb|ACY54657.1| DNA polymerase [Uncultured T7-like podovirus]
gi|262342297|gb|ACY54659.1| DNA polymerase [Uncultured T7-like podovirus]
gi|262342301|gb|ACY54661.1| DNA polymerase [Uncultured T7-like podovirus]
gi|262342307|gb|ACY54664.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 193
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 59/113 (52%), Gaps = 14/113 (12%)
Query: 552 ELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMH 611
E R + A GY ++GAD+ EL + + Y A+ G G + L+G D+H
Sbjct: 11 EFRKLFTASSGYVMVGADLAGIELRMLA----HYLARYDGGR-YGDVLLNG------DIH 59
Query: 612 SITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKM 664
A +GISR K + YA +YGAG++ ++ ++P++S A +K +++
Sbjct: 60 QENADKIGISRRLVKTVTYAFLYGAGDK---KIGLSYDPQLSDKAATAKGKEI 109
>gi|262342123|gb|ACY54572.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 193
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 59/113 (52%), Gaps = 14/113 (12%)
Query: 552 ELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMH 611
E R + A GY ++GAD+ EL + + Y A+ G G + L+G D+H
Sbjct: 11 EFRKLFTASSGYVMVGADLAGIELRMLA----HYLARYDGGR-YGDVLLNG------DIH 59
Query: 612 SITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKM 664
A +GISR K + YA +YGAG++ ++ ++P++S A +K +++
Sbjct: 60 QENADKIGISRRLVKTVTYAFLYGAGDK---KIGLSYDPQLSDKAATAKGKEI 109
>gi|262212377|gb|ACY35805.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 193
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 59/113 (52%), Gaps = 14/113 (12%)
Query: 552 ELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMH 611
E R + A GY ++GAD+ EL + + Y A+ G G + L+G D+H
Sbjct: 11 EFRELFTASSGYVMVGADLAGIELRMLA----HYLARYDGGR-YGDVLLNG------DIH 59
Query: 612 SITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKM 664
A +GISR K + YA +YGAG++ ++ ++P++S A +K +++
Sbjct: 60 QENADKIGISRRLVKTVTYAFLYGAGDK---KIGLSYDPQLSDKAATAKGKEI 109
>gi|262342271|gb|ACY54646.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 193
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 59/113 (52%), Gaps = 14/113 (12%)
Query: 552 ELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMH 611
E R + A GY ++GAD+ EL + + Y A+ G G + L+G D+H
Sbjct: 11 EFRKLFTASSGYVMVGADLAGIELRMLA----HYLARYDGGR-YGDVLLNG------DIH 59
Query: 612 SITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKM 664
A +GISR K + YA +YGAG++ ++ ++P++S A +K +++
Sbjct: 60 QENADKIGISRRLVKTVTYAFLYGAGDK---KIGLSYDPQLSDKAATAKGKEV 109
>gi|262212351|gb|ACY35792.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 193
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 59/113 (52%), Gaps = 14/113 (12%)
Query: 552 ELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMH 611
E R + A GY ++GAD+ EL + + Y A+ G G + L+G D+H
Sbjct: 11 EFRKLFTASPGYVMVGADLAGIELRMLA----HYLARYDGGR-YGDVLLNG------DIH 59
Query: 612 SITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKM 664
A +GISR K + YA +YGAG++ ++ ++P++S A +K +++
Sbjct: 60 QENADKIGISRRLVKTVTYAFLYGAGDK---KIGLSYDPQLSDKAATAKGKEI 109
>gi|262342117|gb|ACY54569.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 192
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 60/116 (51%), Gaps = 14/116 (12%)
Query: 551 SELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDM 610
S R + Q G ++GAD+ EL + S + A+ G + L+G D+
Sbjct: 10 SRFRELFQPSPGQVMVGADLAGIELRMLS----HFLARYDGGR-YADILLNG------DI 58
Query: 611 HSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYT 666
H + A +GISR+ K + YA +YGAG+ E++ ++ ++S S AK K +++ T
Sbjct: 59 HQVNADKIGISRKLVKTVTYAFLYGAGD---EKIGHSYDKQLSSSAAKKKGKEIRT 111
>gi|229472359|gb|ACQ72694.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 190
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 76/158 (48%), Gaps = 22/158 (13%)
Query: 551 SELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDM 610
+E R + +A G ++GAD+ EL + + Y A+ + + L G D+
Sbjct: 10 AEFRKLFKASPGQIMVGADLSGIELRMLA----HYLAR-YDEGRYADVLLHG------DI 58
Query: 611 HSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKG 670
H A +GISR K + YA +YGAG+ +L K ++ ++S+ AK K +++
Sbjct: 59 HQENADKIGISRRQVKTVTYAFLYGAGD---AKLGKSYDAQLSEQQAKKKGKEI------ 109
Query: 671 KKLYRLKDGHLEELIKRVYSKYEAR--EVCSAYNTSVD 706
++ Y LE+L+ V SK E+ +C +VD
Sbjct: 110 RQAYMDAVPGLEKLVTAVKSKAESGFINLCDGRRCTVD 147
>gi|262342103|gb|ACY54562.1| DNA polymerase [Uncultured T7-like podovirus]
gi|262342129|gb|ACY54575.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 193
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 58/113 (51%), Gaps = 14/113 (12%)
Query: 552 ELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMH 611
E R + A GY +GAD+ EL + + Y A+ G G + L+G D+H
Sbjct: 11 EFRKLFTASSGYVTVGADLAGIELRMPA----HYLARYDGGR-YGDVLLNG------DIH 59
Query: 612 SITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKM 664
A +GISR K + YA +YGAG++ ++ ++P++S A +K +++
Sbjct: 60 QENADKIGISRRLVKTVTYAFLYGAGDK---KIGLSYDPQLSDKAATAKGKEI 109
>gi|229472459|gb|ACQ72744.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 190
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 76/158 (48%), Gaps = 22/158 (13%)
Query: 551 SELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDM 610
+E R + +A G ++GAD+ EL + + Y A+ + + L G D+
Sbjct: 10 AEFRKLFKASPGQIMVGADLSGIELRMLA----HYLAR-YDEGRYADVLLHG------DI 58
Query: 611 HSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKG 670
H A +GISR K + YA +YGAG+ +L K ++ ++S+ AK K +++
Sbjct: 59 HQENADKIGISRRQVKTVTYAFLYGAGD---AKLGKSYDAQLSEQQAKKKGKEI------ 109
Query: 671 KKLYRLKDGHLEELIKRVYSKYEAR--EVCSAYNTSVD 706
++ Y LE+L+ V SK E+ +C +VD
Sbjct: 110 RQAYMDAVPGLEKLVTAVKSKAESGFINLCDGRRCTVD 147
>gi|262342147|gb|ACY54584.1| DNA polymerase [Uncultured T7-like podovirus]
gi|262342267|gb|ACY54644.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 193
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 58/113 (51%), Gaps = 14/113 (12%)
Query: 552 ELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMH 611
E R + A GY +GAD+ EL + + Y A+ G G + L+G D+H
Sbjct: 11 EFRKLFTASSGYVTVGADLAGIELRMLA----HYLARYDGGR-YGDVLLNG------DIH 59
Query: 612 SITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKM 664
A +GISR K + YA +YGAG++ ++ ++P++S A +K +++
Sbjct: 60 QENADKIGISRRLVKTVTYAFLYGAGDK---KIGLSYDPQLSDKAATAKGKEI 109
>gi|229472603|gb|ACQ72816.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 190
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 76/158 (48%), Gaps = 22/158 (13%)
Query: 551 SELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDM 610
+E R + +A G ++GAD+ EL + + Y A+ + + L G D+
Sbjct: 10 AEFRRLFKASPGQIMVGADLSGIELRMLA----HYLAR-YDEGRYADVLLHG------DI 58
Query: 611 HSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKG 670
H A +GISR K + YA +YGAG+ +L K ++ ++S+ AK + +++
Sbjct: 59 HQENADKIGISRRQVKTVTYAFLYGAGD---AKLGKSYDAQLSEQQAKKRGKEI------ 109
Query: 671 KKLYRLKDGHLEELIKRVYSKYEAREV--CSAYNTSVD 706
++ Y LE+L+ V SK E+ + C SVD
Sbjct: 110 RQAYMDAVPGLEKLVTAVKSKAESGYINLCDGRRCSVD 147
>gi|262212355|gb|ACY35794.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 190
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 76/158 (48%), Gaps = 22/158 (13%)
Query: 551 SELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDM 610
+ R + A G ++GAD+ EL + + Y A+ + + L G D+
Sbjct: 10 ANFRKLFTATPGQVMVGADLSGIELRMLA----HYLAR-YDEGRYASILLHG------DI 58
Query: 611 HSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKG 670
H A +GISR K + YA +YGAG+ +L + ++P++S+ AK K +++
Sbjct: 59 HQENADKIGISRRQVKTVIYAFLYGAGD---SKLGRSYDPQLSEQQAKKKGKEI------ 109
Query: 671 KKLYRLKDGHLEELIKRVYSKYEAREV--CSAYNTSVD 706
++ Y LE+L+ V SK E+ + C + +VD
Sbjct: 110 RQAYMDAVPGLEKLVTAVKSKAESGYINLCDSRRCTVD 147
>gi|262212371|gb|ACY35802.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 193
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 58/113 (51%), Gaps = 14/113 (12%)
Query: 552 ELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMH 611
E R + A GY ++GAD+ EL + + Y A+ G G + L+G D+H
Sbjct: 11 EFRKLFTASSGYVMVGADLAGIELRMLA----HYLARYDGGR-YGDVLLNG------DIH 59
Query: 612 SITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKM 664
A GISR K + YA +YGAG++ ++ ++P++S A +K +++
Sbjct: 60 QENADKTGISRRLVKTVTYAFLYGAGDK---KIGLSYDPQLSDKAATAKGKEI 109
>gi|422902307|gb|AFX83745.1| DNA polymerase [uncultured Mediterranean phage MEDS1 group]
Length = 614
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 67/148 (45%), Gaps = 22/148 (14%)
Query: 492 FVVWLNKKDLPRRLVENIESEGRDYGVILPQLIVSGTLTRRAVEATWMTASNAVGERV-- 549
+ W +++ R+++E+I + D G + + G T R M++ +++
Sbjct: 321 LMTW-KRREKRRQMIESILDKMSDDGYVRASYMQLGADTGR------MSSIKPNNQQIPR 373
Query: 550 GSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATD 609
SE R +QAP+G+ I+ AD EL +A+ + + + D
Sbjct: 374 DSEFRQCVQAPEGWKIVDADFSQMELRLAAALAND-------------KNMIAAFKRGDD 420
Query: 610 MHSITAKAVGISREHAKIINYARIYGAG 637
+H TA+ +G R+ AK N+ +YGAG
Sbjct: 421 LHDYTAEQMGCDRQIAKSANFGLLYGAG 448
>gi|262212409|gb|ACY35821.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 190
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 76/158 (48%), Gaps = 22/158 (13%)
Query: 551 SELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDM 610
+E R + +A G ++GAD+ EL + + Y A+ + + L G D+
Sbjct: 10 AEFRRLFKASPGQIMVGADLSGIELRMLA----HYLAR-YDEGRYADVLLHG------DI 58
Query: 611 HSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKG 670
H A +GISR K + YA +YGAG+ +L K ++ ++++S K K +++
Sbjct: 59 HQENADKIGISRRAVKTVTYAFLYGAGD---AKLGKSYDAQLTESQTKKKGKEI------ 109
Query: 671 KKLYRLKDGHLEELIKRVYSKYEAR--EVCSAYNTSVD 706
++ Y LE+L+ V SK E+ +C SVD
Sbjct: 110 RQAYMDAVPGLEKLVTAVKSKAESGFINLCGGRRCSVD 147
>gi|262342127|gb|ACY54574.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 187
Score = 49.7 bits (117), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 58/111 (52%), Gaps = 15/111 (13%)
Query: 554 RAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMHSI 613
R + A G ++GADV EL + S Y A+ + T LG L+G D+H +
Sbjct: 13 RRLFMATPGLVMVGADVSGIELRMLS----HYLARYN--TYLGDNLLNG------DIHQL 60
Query: 614 TAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKM 664
A +GI+R+ K + YA +YGAG E++ ++ +S AK+K R++
Sbjct: 61 NADKIGITRKLVKTVTYAFLYGAGN---EKIGYSYDRLLSPQKAKAKGREI 108
>gi|262212367|gb|ACY35800.1| DNA polymerase [Uncultured T7-like podovirus]
gi|262212379|gb|ACY35806.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 193
Score = 49.7 bits (117), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 58/113 (51%), Gaps = 14/113 (12%)
Query: 552 ELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMH 611
E R + A GY ++GAD+ EL + + Y A+ G G + L+G D+H
Sbjct: 11 EFRKLFTASSGYVMVGADLAGIELRMLA----HYLARYDGGR-YGDVLLNG------DIH 59
Query: 612 SITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKM 664
A +GISR K YA +YGAG++ ++ ++P++S A +K +++
Sbjct: 60 QENADKIGISRRLVKTATYAFLYGAGDK---KIGLSYDPQLSDKAATAKGKEI 109
>gi|262342107|gb|ACY54564.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 191
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 75/158 (47%), Gaps = 22/158 (13%)
Query: 551 SELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDM 610
+E R + +A ++GAD+ EL + + Y A+ + + L G D+
Sbjct: 11 AEFRKLFKASPNQVMVGADLSGIELRMLA----HYLAR-YDEGRYADVLLHG------DI 59
Query: 611 HSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKG 670
H A +GISR K + YA +YGAG+ +L K F+ ++++ AK K +++
Sbjct: 60 HQENADKIGISRRAVKTVTYAFLYGAGD---SKLGKSFDAQLTEQQAKKKGKEI------ 110
Query: 671 KKLYRLKDGHLEELIKRVYSKYEAREV--CSAYNTSVD 706
++ Y LE+L+ V SK E+ + C SVD
Sbjct: 111 RQAYMDAVPGLEKLVNAVKSKAESGYINLCDGRRCSVD 148
>gi|291335358|gb|ADD94973.1| DNA polymerase I putative [uncultured phage MedDCM-OCT-S04-C148]
Length = 640
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 105/239 (43%), Gaps = 37/239 (15%)
Query: 407 KKKLAEASSTDTSTDDADTPREIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAG--- 463
+K AE S + ST ++ G I+L K N+ +P + + K + + G
Sbjct: 265 EKWYAELESLENSTTFNTRSKDEGSIRLGTKKYAGFNINSP--KQLVEKLT--VILGEPP 320
Query: 464 VDIGAKRIIEISRMLSYWRNNHERVKKQFVVWLNKKDLPRRLVENIESEGRDYGVILPQL 523
D K + SY +HE V + ++ W + + R+++E+I+ + G +
Sbjct: 321 RDANGKPSASRQALRSY-AADHE-VIQIYLEW-KRCEKRRQMIESIQEKMDGTGFVRASY 377
Query: 524 IVSGTLTRRAVEATWMTASNAVGERV--GSELRAMIQAPDGYSIIGADVDSQELWIASVI 581
+ G + R M+ +++ + R+ ++AP+G+ ++ AD EL +A+ +
Sbjct: 378 MQLGAESGR------MSCIKPNNQQIPRDKQFRSCVEAPEGWLLVDADFGQMELRLAAAV 431
Query: 582 GDS---YCAKEHGATPLGWMTLSGQKSNATDMHSITAKAVGISREHAKIINYARIYGAG 637
D A + G P H++TAKA+G R+ AK N+ +YG+G
Sbjct: 432 ADDERMIAAFQAGEDP----------------HTVTAKAIGCDRQTAKSANFGLLYGSG 474
>gi|262342109|gb|ACY54565.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 190
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 75/158 (47%), Gaps = 22/158 (13%)
Query: 551 SELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDM 610
+E R + +A ++GAD+ EL + + Y A+ + + L G D+
Sbjct: 10 AEFRKLFKASPNQVMVGADLSGIELRMLA----HYLAR-YDEGRYADVLLHG------DI 58
Query: 611 HSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKG 670
H A +GISR K + YA +YGAG+ +L K F+ ++++ AK K +++
Sbjct: 59 HQENADKIGISRRAVKTVTYAFLYGAGD---SKLGKSFDAQLTEQQAKKKGKEI------ 109
Query: 671 KKLYRLKDGHLEELIKRVYSKYEAR--EVCSAYNTSVD 706
++ Y LE+L+ V SK E+ +C SVD
Sbjct: 110 RQAYMDAVPGLEKLVNAVKSKAESGFINLCDGRRCSVD 147
>gi|32442303|gb|AAP82222.1| DNA polymerase [Podovirus SOG]
Length = 409
Score = 49.3 bits (116), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 60/128 (46%), Gaps = 23/128 (17%)
Query: 517 GVILPQLIVSGTLTRRAVEATWMTASN-AVGERVGSELRAMIQAPDGYSIIGADVDSQEL 575
G I ++ +G T R + A +VG G E R + AP+GYS++GAD+ EL
Sbjct: 245 GKIHGRVNTNGAATGRCTHSKPNVAQTPSVGAAYGRECRELFHAPEGYSLVGADLSGLEL 304
Query: 576 -----WIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMHSITAKAVGI-SREHAKIIN 629
++A SY + ++G D+H++ K+ G+ +R +AK
Sbjct: 305 RCLAHYMARFDSGSYAD----------VVVNG------DIHTLNQKSAGLPTRNNAKTFI 348
Query: 630 YARIYGAG 637
Y +YGAG
Sbjct: 349 YGFLYGAG 356
>gi|448937003|gb|AGE60547.1| DNA polymerase family A [Pelagibacter phage HTVC011P]
Length = 589
Score = 48.9 bits (115), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 60/147 (40%), Gaps = 15/147 (10%)
Query: 509 IESEGRDYGVILPQLIVSGTLTRRAVEATWMTASNAVGERVGSELRAMIQAPDGYSIIGA 568
+ +G+ YG I+ +SG T +S G G E R++ AP + G
Sbjct: 320 LNRKGKIYGKIITNGALSGRCTHHHPNLAQCVSS---GSPFGKEFRSLFTAPSSMVMCGI 376
Query: 569 DVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMHSITAKAVGI-SREHAKI 627
D EL + + + Y + L D+H+I KA G+ +R+ AK
Sbjct: 377 DFSGLELRVLAHYLNVYDNGDFSKKLL-----------EDDIHTINQKATGLPTRDKAKT 425
Query: 628 INYARIYGAGERFAERLLKQFNPEMSK 654
YA IYGAG +LK N E +
Sbjct: 426 FIYAFIYGAGNEKLGEILKVNNDEAKR 452
>gi|229472383|gb|ACQ72706.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 193
Score = 48.5 bits (114), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 61/114 (53%), Gaps = 14/114 (12%)
Query: 551 SELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDM 610
+E R + A G ++GAD+ EL + + Y A+ G G + ++G D+
Sbjct: 10 AEFRKLFTATPGMVMVGADLAGIELRMLA----HYLARFDGGR-YGDVLING------DI 58
Query: 611 HSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKM 664
H A VGISR+ K + YA +YGAG+ +++ ++P++S + A++K ++
Sbjct: 59 HQENADKVGISRKLVKTVTYAFLYGAGD---QKIGLSYDPQLSPTKARAKGAEI 109
>gi|262212373|gb|ACY35803.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 190
Score = 48.1 bits (113), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 74/158 (46%), Gaps = 22/158 (13%)
Query: 551 SELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDM 610
+ R + A G ++GAD+ EL + + Y A+ + + L G D+
Sbjct: 10 ANFRKLFTATPGQVMVGADLSGIELRMLA----HYLAR-YDEGRYASILLHG------DI 58
Query: 611 HSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKG 670
H A +GISR K + YA +YGAG+ R ++P++S+ AK K +++
Sbjct: 59 HQENADKIGISRRQVKTVIYAFLYGAGDSKPGR---SYDPQLSEQQAKKKGKEI------ 109
Query: 671 KKLYRLKDGHLEELIKRVYSKYEAREV--CSAYNTSVD 706
++ Y LE+L+ V SK E+ + C + +VD
Sbjct: 110 RQAYMDAVPGLEKLVTAVKSKAESGYINLCDSRRCTVD 147
>gi|229472251|gb|ACQ72640.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 193
Score = 48.1 bits (113), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 61/114 (53%), Gaps = 14/114 (12%)
Query: 551 SELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDM 610
+E R + A G ++GAD+ EL + + Y A+ G G + ++G D+
Sbjct: 10 AEFRKLFTATPGMVMVGADLAGIELRMLA----HYLARFDGGR-YGDVLING------DI 58
Query: 611 HSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKM 664
H A +GISR+ K + YA +YGAG+ +++ ++P++S + A++K ++
Sbjct: 59 HQENADKIGISRKLVKTVTYAFLYGAGD---QKIGLSYDPQLSPTKARAKGAEI 109
>gi|229472229|gb|ACQ72629.1| DNA polymerase [Uncultured T7-like podovirus]
gi|229472329|gb|ACQ72679.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 193
Score = 47.8 bits (112), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 61/114 (53%), Gaps = 14/114 (12%)
Query: 551 SELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDM 610
+E R + A G ++GAD+ EL + + Y A+ G G + ++G D+
Sbjct: 10 AEFRKLFTATPGMVMVGADLAGIELRMLA----HYLARFDGGR-YGDVLING------DI 58
Query: 611 HSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKM 664
H A +GISR+ K + YA +YGAG+ +++ ++P++S + A++K ++
Sbjct: 59 HQENADKIGISRKLVKTVTYAFLYGAGD---QKIGLSYDPQLSPTKARAKGAEI 109
>gi|404379564|ref|ZP_10984620.1| DNA polymerase I [Simonsiella muelleri ATCC 29453]
gi|404294620|gb|EFG30551.2| DNA polymerase I [Simonsiella muelleri ATCC 29453]
Length = 916
Score = 47.8 bits (112), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 118/312 (37%), Gaps = 89/312 (28%)
Query: 518 VILPQLIVSGTLTRRAVEATWMTASN-------AVGERVGSELRAMIQAPDGYSIIGADV 570
+I PQ T +AV T ASN + + G +R APDGY I+ AD
Sbjct: 635 MINPQTGRVHTNYAQAVAITGRLASNNPNLQNIPIRTKQGRRVRRAFNAPDGYLIVSADY 694
Query: 571 DSQELWI-ASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMHSITAKAV-GIS------- 621
EL I A + GD+ TL N D+H TA V G++
Sbjct: 695 SQIELRIMAHLSGDA--------------TLQAAFQNNEDVHRRTAAEVFGVAPEKITLE 740
Query: 622 -REHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKGKKLYRLKDGH 680
R +AK IN+ IYG GE Y L K + +
Sbjct: 741 QRRYAKTINFGLIYGMGE--------------------------YGLAKSLGIDNVSAAM 774
Query: 681 LEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQWYGGTESAMFNR---LEEIATSLQPVT 737
IKR +++Y + + + + Q +G E+ +F R L +I +
Sbjct: 775 ---FIKRYFARY------TGVAEYMQRTKEHAQQFGFVET-LFGRKLYLPDIHS------ 818
Query: 738 PFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFL-HLMLVCMRWLVSRDTRFVISI 796
N + RA + IN +Q A D + M+ ++L+++ +R V+ +
Sbjct: 819 ---NHAMKRAGAE---------RAAINAPMQGTASDLIKKAMIDVSKFLMNQKSRLVMQV 866
Query: 797 HDEIRYLVPDEE 808
HDE+ V + E
Sbjct: 867 HDELVLEVHESE 878
>gi|229472569|gb|ACQ72799.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 192
Score = 47.8 bits (112), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 55/113 (48%), Gaps = 14/113 (12%)
Query: 552 ELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMH 611
E R + +A G ++GAD+ EL + Y +G L D+H
Sbjct: 11 EFRRLFRASPGQRMVGADLSGVELRCLAHYLAGYDGGRYGEILLN-----------DDIH 59
Query: 612 SITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKM 664
+ A +GISR+ K + YA +YGAG+ +++ ++ +S + AK+K +++
Sbjct: 60 QVNADKIGISRKLVKTVTYAFLYGAGD---QKIGLSYDKSLSPNKAKAKGKEI 109
>gi|229472247|gb|ACQ72638.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 193
Score = 47.8 bits (112), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 59/111 (53%), Gaps = 14/111 (12%)
Query: 551 SELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDM 610
+E R + A G ++GAD+ EL + + Y A+ G G + ++G D+
Sbjct: 10 AEFRKLFTATPGMVMVGADLAGIELRMLA----HYLARFDGGR-YGDVLING------DI 58
Query: 611 HSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKA 661
H A +GISR+ K + YA +YGAG+ +++ ++P++S + A++K
Sbjct: 59 HQENADKIGISRKLVKTVTYAFLYGAGD---QKIGLSYDPQLSPTKARAKG 106
>gi|229472225|gb|ACQ72627.1| DNA polymerase [Uncultured T7-like podovirus]
gi|229472385|gb|ACQ72707.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 193
Score = 47.8 bits (112), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 61/114 (53%), Gaps = 14/114 (12%)
Query: 551 SELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDM 610
+E R + A G ++GAD+ EL + + Y A+ G G + ++G D+
Sbjct: 10 AEFRKLFTATPGMVMVGADLAGIELRMLA----HYLARFDGGR-YGDVLING------DI 58
Query: 611 HSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKM 664
H A +GISR+ K + YA +YGAG+ +++ ++P++S + A++K ++
Sbjct: 59 HQENADKIGISRKLVKTVTYAFLYGAGD---QKIGLSYDPQLSPTKARAKGAEI 109
>gi|229472471|gb|ACQ72750.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 193
Score = 47.8 bits (112), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 61/114 (53%), Gaps = 14/114 (12%)
Query: 551 SELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDM 610
+E R + A G ++GAD+ EL + + Y A+ G G + ++G D+
Sbjct: 10 AEFRKLFTATPGMVMVGADLAGIELRMLA----HYLARFDGGR-YGDVLING------DI 58
Query: 611 HSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKM 664
H A +GISR+ K + YA +YGAG+ +++ ++P++S + A++K ++
Sbjct: 59 HQENADKIGISRKLVKTVTYAFLYGAGD---QKIGLSYDPQLSPTKARAKGAEI 109
>gi|291335384|gb|ADD94998.1| DNA polymerase [uncultured phage MedDCM-OCT-S04-C24]
Length = 217
Score = 47.8 bits (112), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 36/56 (64%), Gaps = 3/56 (5%)
Query: 609 DMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKM 664
D+H I A +GISR K + YA +YGAG+ E++ ++P++S + AK K +++
Sbjct: 34 DIHQINADKIGISRRQVKTVTYAFLYGAGD---EKIGHSYDPQLSTTAAKKKGKEI 86
>gi|262212397|gb|ACY35815.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 193
Score = 47.8 bits (112), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 58/113 (51%), Gaps = 14/113 (12%)
Query: 552 ELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMH 611
E R + A GY ++GAD+ EL + + Y A+ G + L+G D+H
Sbjct: 11 EFRKLFTASSGYVMVGADLAGIELRMLA----HYLARYDGGRYRDVL-LNG------DIH 59
Query: 612 SITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKM 664
A +GISR K + YA +YGAG++ ++ ++P++S A +K +++
Sbjct: 60 QENADKIGISRRLVKTVTYAFLYGAGDK---KIGLSYDPQLSDKAAIAKGKEI 109
>gi|229472535|gb|ACQ72782.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 192
Score = 47.4 bits (111), Expect = 0.033, Method: Composition-based stats.
Identities = 33/115 (28%), Positives = 58/115 (50%), Gaps = 14/115 (12%)
Query: 550 GSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATD 609
G E R + +A G ++GAD+ EL + + Y A+ G G + ++G D
Sbjct: 9 GDEFRKLFRATPGMVMVGADLAGIELRMLA----HYLARWDGGR-YGDVLING------D 57
Query: 610 MHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKM 664
+H A +GISR K + YA +YGAG+ +++ ++ +S AK K +++
Sbjct: 58 IHQENADKIGISRRLVKTVTYAFLYGAGD---QKIGLSYDQSLSADKAKKKGQEI 109
>gi|157826228|ref|YP_001493948.1| DNA polymerase I [Rickettsia akari str. Hartford]
gi|157800186|gb|ABV75440.1| DNA polymerase I [Rickettsia akari str. Hartford]
Length = 872
Score = 47.0 bits (110), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 104/273 (38%), Gaps = 72/273 (26%)
Query: 545 VGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGD------SYCAKEHGATPLGWM 598
+ R G+++R A +GY +I AD EL I S I + ++ K+ T
Sbjct: 627 IRSREGNKIRQAFIAEEGYKLISADYSQIELRILSHIANIDTLKQAFINKDDIHTQTACQ 686
Query: 599 TLSGQKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAK 658
+ QK T H R AK IN+ IYG A L KQ N +S S+A
Sbjct: 687 IFNLQKHELTSEH----------RRKAKAINFGIIYGIS---AFGLAKQLN--VSNSEAS 731
Query: 659 SKARKMYTLTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQWYGGT 718
+K + KG + Y E A+ +S G
Sbjct: 732 EYIKKYFAEYKGVQEY--------------------MEQTKAFASS-----------NGY 760
Query: 719 ESAMFNRLEEIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLM 778
F R + P ++ + L+ +E + IN +Q D + +
Sbjct: 761 VINFFGR--------KCFIPLIH---DKKLKQFAE------RAAINAPIQGTNADIIKIA 803
Query: 779 LVCMRWLVSRD---TRFVISIHDEIRYLVPDEE 808
++ + ++++ TR V+ IHDE+ + VP++E
Sbjct: 804 MINLDQEIAKNKLKTRLVLQIHDELLFEVPEDE 836
>gi|254502983|ref|ZP_05115134.1| DNA polymerase I domain protein [Labrenzia alexandrii DFL-11]
gi|222439054|gb|EEE45733.1| DNA polymerase I domain protein [Labrenzia alexandrii DFL-11]
Length = 593
Score = 47.0 bits (110), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 62/127 (48%), Gaps = 14/127 (11%)
Query: 553 LRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMHS 612
+R +A G+ ++G D + EL + + Y K G L L G K TD H+
Sbjct: 347 MRECWEARPGWDLVGVDAEGLELRMLA----HYLGKFDGGA-LTRALLEGSKEAGTDAHT 401
Query: 613 ITAKAVGI-SREHAKIINYARIYGAGERFAERLL------KQFNPEMSKSDAKSKARKMY 665
I KAVG+ R++AK + YA +YGAG+ +++ N + +K +KARK
Sbjct: 402 INQKAVGLHKRDNAKRLLYALMYGAGDVKLGQIIVDDAREAGINLKGNKKALGAKARK-- 459
Query: 666 TLTKGKK 672
L KG K
Sbjct: 460 DLAKGMK 466
>gi|262342131|gb|ACY54576.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 190
Score = 47.0 bits (110), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 59/117 (50%), Gaps = 16/117 (13%)
Query: 551 SELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAK-EHGATPLGWMTLSGQKSNATD 609
SE R + Q G ++GAD+ EL + + Y A+ + G + L G D
Sbjct: 10 SEFRKLFQPTPGQIMVGADLSGIELRMLA----HYLARFDRGV--YADILLHG------D 57
Query: 610 MHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYT 666
+H + A +GISR K + YA +YGAG+ ++ ++ +S + AKSK +++ T
Sbjct: 58 IHQVNADKIGISRRAVKTVTYAFLYGAGD---AKIGLSYDSSLSPTRAKSKGKEIRT 111
>gi|254505350|ref|ZP_05117498.1| DNA polymerase I domain protein [Labrenzia alexandrii DFL-11]
gi|222436194|gb|EEE42876.1| DNA polymerase I domain protein [Labrenzia alexandrii DFL-11]
Length = 580
Score = 47.0 bits (110), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 62/127 (48%), Gaps = 14/127 (11%)
Query: 553 LRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMHS 612
+R +A G+ ++G D + EL + + Y K G L L G K TD H+
Sbjct: 334 MRECWEARPGWDLVGVDAEGLELRMLA----HYLGKFDGGA-LTRALLEGSKEAGTDAHT 388
Query: 613 ITAKAVGI-SREHAKIINYARIYGAGERFAERLL------KQFNPEMSKSDAKSKARKMY 665
I KAVG+ R++AK + YA +YGAG+ +++ N + +K +KARK
Sbjct: 389 INQKAVGLHKRDNAKRLLYALMYGAGDVKLGQIIVDDAREAGINLKGNKKALGAKARK-- 446
Query: 666 TLTKGKK 672
L KG K
Sbjct: 447 DLAKGMK 453
>gi|229472175|gb|ACQ72602.1| DNA polymerase [Uncultured T7-like podovirus]
gi|229472207|gb|ACQ72618.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 180
Score = 47.0 bits (110), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 57/116 (49%), Gaps = 14/116 (12%)
Query: 551 SELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDM 610
S R + G ++GAD+ EL + S Y + + L+G D+
Sbjct: 10 SRFRELFLPSPGQIMVGADLAGIELRMLSHFLAKYDQGRYAD-----ILLNG------DI 58
Query: 611 HSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYT 666
H + A +GISR+ K + YA +YGAG+ E++ ++ ++S S AK K +++ T
Sbjct: 59 HQVNADKIGISRKLVKTVTYAFLYGAGD---EKIGHSYDKQLSSSAAKKKGKEIRT 111
>gi|262342321|gb|ACY54671.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 193
Score = 46.6 bits (109), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 57/113 (50%), Gaps = 14/113 (12%)
Query: 552 ELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMH 611
E R + A GY ++GAD+ EL + + Y A+ G G + L+G +H
Sbjct: 11 EFRKLFTASSGYVMVGADLAGIELRMLA----HYLARYDGGR-YGDVLLNG------GIH 59
Query: 612 SITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKM 664
A +GISR K + YA +YGAG++ ++ ++P+ S A +K +++
Sbjct: 60 QENADKIGISRRLVKTVTYAFLYGAGDK---KIGLSYDPQPSDKAATAKGKEI 109
>gi|262342089|gb|ACY54555.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 192
Score = 46.6 bits (109), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 55/112 (49%), Gaps = 14/112 (12%)
Query: 553 LRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMHS 612
R + A G + GAD+ EL + + Y AK H + L+G D+H
Sbjct: 12 FRELFTASPGMVMCGADLSGVELRMLA----HYLAK-HDGGKYADILLNG------DIHQ 60
Query: 613 ITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKM 664
+ A +GISR K + YA +YGAG+ E++ ++ +S AK+K +++
Sbjct: 61 VNADKIGISRSAVKTVTYAFLYGAGD---EKIGHSYDKLLSSKAAKAKGKEI 109
>gi|32442287|gb|AAP82214.1| DNA polymerase [Podovirus SOG]
Length = 400
Score = 46.6 bits (109), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 60/135 (44%), Gaps = 20/135 (14%)
Query: 506 VENIESEGRDYGVILPQLIVSGTLTRRAVEATWMTASNAVGERVGSELRAMIQAPDGYSI 565
VE ++ +GR +G ++P ++G +T R + AV G E RA +G +
Sbjct: 234 VEGVQEDGRVHGFVIPNGAITGRMTHRNPNVAQVP---AVYSPYGKECRACWTVEEGNVL 290
Query: 566 IGADVDSQEL-WIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMHSITAKAVGI-SRE 623
IG D E+ +A + D E L+G D+H+ K + SR+
Sbjct: 291 IGVDASGLEIRMLAHYMNDEEYTNE---------ILNG------DIHTANQKLAKLESRD 335
Query: 624 HAKIINYARIYGAGE 638
AK YA +YGAG+
Sbjct: 336 KAKTFIYALMYGAGD 350
>gi|402576018|gb|EJW69978.1| hypothetical protein WUBG_19115, partial [Wuchereria bancrofti]
Length = 72
Score = 46.2 bits (108), Expect = 0.077, Method: Composition-based stats.
Identities = 27/61 (44%), Positives = 35/61 (57%), Gaps = 7/61 (11%)
Query: 839 SISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKANGVIGTFK 898
S++FFS V+ID+VLRKE + C TPS G C IP GE LD+ + K G +
Sbjct: 1 SVAFFSQVDIDRVLRKEVNLVCTTPS---GEC----IPPGEALDMNAILMKTGGTLKKVA 53
Query: 899 N 899
N
Sbjct: 54 N 54
>gi|32442297|gb|AAP82219.1| DNA polymerase [Podovirus GOM]
Length = 397
Score = 46.2 bits (108), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 59/137 (43%), Gaps = 24/137 (17%)
Query: 506 VENIESEGRDYGVILPQLIVSGTLTRRAVEATWMTASNAVGERVGSELRAMIQAPDGYSI 565
+E + +GR +G + V+G +T + A A G E R+ P+GYS+
Sbjct: 231 IEAADDDGRVHGRVNTNGAVTGRMTHSEPNLAQVPAVRAP---YGKECRSCWTVPEGYSL 287
Query: 566 IGADVDSQEL-WIASVIGDSYCAKE--HGATPLGWMTLSGQKSNATDMHSITAKAVGI-S 621
+G D EL +A +GD E HG D+H+ G+ S
Sbjct: 288 VGFDASGLELRMLAHYMGDREYTNEILHG-----------------DIHTANQHLAGLES 330
Query: 622 REHAKIINYARIYGAGE 638
R+ AK YA +YGAG+
Sbjct: 331 RDQAKTFIYAFLYGAGD 347
>gi|291335495|gb|ADD95107.1| 5B protein [uncultured phage MedDCM-OCT-S04-C348]
Length = 429
Score = 46.2 bits (108), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 78/177 (44%), Gaps = 15/177 (8%)
Query: 517 GVILPQLIVSGTLTRRAVEATWMTASNAVG-ERVGSELRAMIQAPDGYSIIGADVDSQEL 575
G I ++ +G +T R TA G G E R++ APD + +IG+D + EL
Sbjct: 126 GYIHGDMVTNGCITGRCSHRNPNTAQIPAGYSPYGKECRSLFHAPDDWILIGSDAKALEL 185
Query: 576 WIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMHSITAKAVGI-SREHAKIINYARIY 634
+ + E+G ++ D+H+ + G+ +R+ +K + YA +Y
Sbjct: 186 RCLAGYLAFWDGGEYGQM---------VTDDSVDIHTYNQEKFGVETRDISKRLLYAVLY 236
Query: 635 GAGERFAERLL--KQFNPEMSKSDAKSKARKMYTLTKGKKLYRLKDGHLEELIKRVY 689
GAG A ++ + +P++ K K+ +T L LK+ E L+ R Y
Sbjct: 237 GAGFYKAGTIVDPDEKDPDILKQLGKTAINSF--MTGVPALQELKNKLAENLVARGY 291
>gi|229472183|gb|ACQ72606.1| DNA polymerase [Uncultured T7-like podovirus]
gi|229472275|gb|ACQ72652.1| DNA polymerase [Uncultured T7-like podovirus]
gi|229472399|gb|ACQ72714.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 181
Score = 46.2 bits (108), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 57/116 (49%), Gaps = 14/116 (12%)
Query: 551 SELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDM 610
S R + G ++GAD+ EL + S Y + + L+G D+
Sbjct: 10 SRFRELFLPSPGQIMVGADLAGIELRMLSHFLAKYDQGRYAD-----ILLNG------DI 58
Query: 611 HSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYT 666
H + A +GISR+ K + YA +YGAG+ E++ ++ ++S S AK K +++ T
Sbjct: 59 HQVNADKIGISRKLVKTVTYAFLYGAGD---EKIGHSYDKQLSSSAAKKKGKEIRT 111
>gi|32442299|gb|AAP82220.1| DNA polymerase [Podovirus GOM]
Length = 396
Score = 45.8 bits (107), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 88/213 (41%), Gaps = 45/213 (21%)
Query: 451 DFINKFSDNSLAGVDIGAKRIIEISRMLSY--WRNNHERVKKQFVV---WLNKKDLP--- 502
D FS S ++G+++ +I+R L + W+ K Q +V L++ D+P
Sbjct: 154 DVAGPFSRVSFPEFNLGSRQ--QIARHLQFFGWKPKLFTEKGQAIVDEGVLSRVDIPEAK 211
Query: 503 ---------------RRLVENIESEGRDYGVILPQLIVSGTLTRRAVEATWMTASNAVGE 547
+ +E +E +GR +G + P V+G +T + + AS +
Sbjct: 212 LIAEYLLIQKRTAQVQSWIEAVEEDGRVHGRVNPIGAVTGRMTHSSPNMAQVPASYSP-- 269
Query: 548 RVGSELRAMIQAPDGYSIIGADVDSQEL-WIASVIGDSYCAKEHGATPLGWMTLSGQKSN 606
G+E R P GY ++G D EL +A + D E
Sbjct: 270 -YGTECRECWTVPKGYRLVGIDAAGLELRMLAHYMNDEEYTNE---------------VT 313
Query: 607 ATDMHSITAKAVGI-SREHAKIINYARIYGAGE 638
D+H+ K G+ +R+ AK YA +YGAG+
Sbjct: 314 NGDVHTTNQKNAGLATRDLAKTFIYAFLYGAGD 346
>gi|296273188|ref|YP_003655819.1| DNA polymerase I [Arcobacter nitrofigilis DSM 7299]
gi|296097362|gb|ADG93312.1| DNA polymerase I [Arcobacter nitrofigilis DSM 7299]
Length = 900
Score = 45.8 bits (107), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 73/338 (21%), Positives = 130/338 (38%), Gaps = 87/338 (25%)
Query: 519 ILPQLIVSGTLTRRAVEATWMTASNAVGERVGSELRAMIQAPDGYSIIGADVDSQELWIA 578
I + +GT T R + V G E+R A DGY ++G D EL +
Sbjct: 632 IYTSFLQTGTATGRLSSKNPNLQNIPVKSSAGREIRKAFIARDGYKLVGIDYSQIELRLL 691
Query: 579 SVIGDSYCAKEHGATPLGWMTLSGQKSNATDMHSITAKAV------GISREHAKIINYAR 632
++ +K+ L ++ D+HS TA + R AK IN+
Sbjct: 692 -----AHFSKDKA--------LVDAFNSDLDIHSQTAVKIFGEEKASQKRNIAKTINFGL 738
Query: 633 IYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTL---TKGKKLYRLKDGHLEELIKRVY 689
+YG G + LK P+ +K S + K + + L++G++E LIKR
Sbjct: 739 LYGMGSKKLADTLK-ITPKEAKVYIDSYFEAFTNVKEYMKSIEDFALENGYVETLIKR-- 795
Query: 690 SKYEAREVCSAYNTSVDKIFDKPQWYGGTESAMFNRLEEIATSLQPVTPFLNCRLSRALE 749
+IFD FN A ++Q +
Sbjct: 796 ----------------RRIFD------------FNA----ANTMQRIG------------ 811
Query: 750 PVSEDDSKFIQTRINWVVQSGAVDFLHLMLVCM--RWLVSRDTRFVISIHDEIRYLVPDE 807
+++ +N Q A D + L ++ + ++ + D + ++ IHDE+ + V +E
Sbjct: 812 --------YLREAVNTKFQGSAADLIKLSMIKIFEKYKNNEDLKMILQIHDELIFEVKNE 863
Query: 808 EKYETALALHVTNLLTRAFCIKKLDMTDIPLSISFFSG 845
++ E +TN L + ++ + +IPL +S G
Sbjct: 864 KQDE------ITNDLKK--IMENIFTLEIPLKVSVAVG 893
>gi|262212381|gb|ACY35807.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 187
Score = 45.8 bits (107), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 56/111 (50%), Gaps = 15/111 (13%)
Query: 554 RAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMHSI 613
R + A G ++GAD+ EL + S Y A+ T G L+G D+H +
Sbjct: 13 RRLFMATPGQVMVGADLSGIELRMLS----HYLARYD--TYFGDNLLNG------DIHQL 60
Query: 614 TAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKM 664
A +GI+R+ K + YA +YGAG E++ ++ +S AK+K R++
Sbjct: 61 NADKIGITRKLVKTVTYAFLYGAGN---EKIGYSYDRLLSPQKAKAKGREI 108
>gi|282857717|ref|ZP_06266926.1| DNA polymerase [Pyramidobacter piscolens W5455]
gi|282584387|gb|EFB89746.1| DNA polymerase [Pyramidobacter piscolens W5455]
Length = 656
Score = 45.8 bits (107), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 65/139 (46%), Gaps = 20/139 (14%)
Query: 513 GRDYGVILPQLIVSGTLTRRAVEATW-MTASNAVGERVGSELRAMIQAPDGYSIIGADVD 571
GRD G I +I +G +T R + M AVG G+E R++ AP G+S++GAD
Sbjct: 335 GRD-GRIHGHVITNGAVTGRCTHVSPNMAQVPAVGVPWGAEFRSLFYAPPGWSVLGADAS 393
Query: 572 SQEL-----WIASVIGDSYCAK-------EHGATPLGWMTLSGQKSNATDMHSITAKAVG 619
EL ++A G +Y K A LG + G+K + + + + A+
Sbjct: 394 GLELRCLAHFMARYDGGAYARKILEGDIHWANAQALG-LVAEGEKKDPENPYHMWAR--- 449
Query: 620 ISREHAKIINYARIYGAGE 638
+ AK YA YGAG+
Sbjct: 450 --NKVAKRFIYALNYGAGD 466
>gi|262342113|gb|ACY54567.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 192
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 56/114 (49%), Gaps = 14/114 (12%)
Query: 551 SELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDM 610
R + G + GAD+ EL + S Y A+ G + L+G D+
Sbjct: 10 GRFRELFIPSKGLVMCGADLSGIELRMLS----HYLARFDGGR-YAEILLNG------DI 58
Query: 611 HSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKM 664
H + A +GISR+ K + YA +YGAG+ E++ ++ ++S + AK K +++
Sbjct: 59 HQVNADKIGISRKQVKTVTYAFLYGAGD---EKIGYSYDAQLSSTAAKRKGKEI 109
>gi|262342125|gb|ACY54573.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 192
Score = 45.4 bits (106), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 56/114 (49%), Gaps = 14/114 (12%)
Query: 551 SELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDM 610
S R + Q G ++GAD+ EL + S Y + + L+G D+
Sbjct: 10 SRFRELFQPSPGQLMVGADLAGIELRMLSHFLARYDQGRYAD-----ILLNG------DI 58
Query: 611 HSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKM 664
H + A +GISR+ K + YA +YGAG+ E++ ++ +S + AK K +++
Sbjct: 59 HQVNADKIGISRKLVKTVTYAFLYGAGD---EKIGHSYDKLLSSTAAKKKGKEI 109
>gi|90408664|ref|ZP_01216816.1| DNA polymerase I [Psychromonas sp. CNPT3]
gi|90310240|gb|EAS38373.1| DNA polymerase I [Psychromonas sp. CNPT3]
Length = 936
Score = 45.4 bits (106), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 109/264 (41%), Gaps = 61/264 (23%)
Query: 550 GSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATD 609
G +R AP GY I+ AD EL I ++ +++ G L K+ A++
Sbjct: 693 GRRIRQAFIAPQGYKIVAADYSQIELRIM-----AHLSQDKGLLEAFSTGLDIHKATASE 747
Query: 610 MHSITAKAVGIS-REHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLT 668
+ S++ V + R AK IN+ IYG A L KQ ++S+SDA
Sbjct: 748 VFSVSVDEVTTNQRRSAKAINFGLIYGMS---AFGLAKQL--KISRSDA----------- 791
Query: 669 KGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQWYGGTESAMFNRLEE 728
KLY + + + +Y V + T+ DK ++ G E+ + RL+
Sbjct: 792 ---KLY----------MDKYFHRYPG--VLTYMQTTRDKAREQ----GFVETILGRRLQ- 831
Query: 729 IATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFL-HLMLVCMRWL-- 785
P +N R + L+ SE + IN +Q A D + ML W+
Sbjct: 832 --------LPHINSR-NGILKKASE------RAAINAPMQGTAADIIKKAMLDVAAWVEK 876
Query: 786 -VSRDTRFVISIHDEIRYLVPDEE 808
+ ++ +HDE+ + + +++
Sbjct: 877 QAPSQVQLLMQVHDELVFCIKEDQ 900
>gi|262342133|gb|ACY54577.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 192
Score = 45.4 bits (106), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 56/114 (49%), Gaps = 14/114 (12%)
Query: 551 SELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDM 610
S R + Q G ++GAD+ EL + S Y + + L+G D+
Sbjct: 10 SRFRELFQPSPGQLMVGADLAGIELRMLSHFLARYDQGRYAD-----ILLNG------DI 58
Query: 611 HSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKM 664
H + A +GISR+ K + YA +YGAG+ E++ ++ +S + AK K +++
Sbjct: 59 HQVNADKIGISRKLVKTVTYAFLYGAGD---EKIGHSYDKLLSSTAAKKKGKEI 109
>gi|156122486|gb|ABU50234.1| DNA polymerase [Cyanophage S-CBP3]
Length = 582
Score = 45.1 bits (105), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 57/114 (50%), Gaps = 14/114 (12%)
Query: 551 SELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDM 610
+E R + +A G ++GAD+ EL + + Y A+ G G + L+G D+
Sbjct: 352 AEFRKLFRATPGMVMVGADLAGIELRMLA----HYLAQWDGGR-YGDVLLNG------DI 400
Query: 611 HSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKM 664
H A +GISR K + YA +YGAG +++ ++ +S AK K +++
Sbjct: 401 HQENADKIGISRRLVKTVTYAFLYGAGN---QKIGLSYDQSLSPDKAKKKGQEI 451
>gi|262342145|gb|ACY54583.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 192
Score = 45.1 bits (105), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 55/114 (48%), Gaps = 14/114 (12%)
Query: 551 SELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDM 610
S R + Q G ++GAD+ EL + S Y + + L+G D+
Sbjct: 10 SRFRELFQPSPGQLMVGADLAGIELRMLSHFLARYDQGRYAD-----ILLNG------DI 58
Query: 611 HSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKM 664
H + A +GISR K + YA +YGAG+ E++ ++ +S + AK K +++
Sbjct: 59 HQVNADKIGISRRLVKTVTYAFLYGAGD---EKIGHSYDKLLSSTAAKKKGKEI 109
>gi|294083961|ref|YP_003550718.1| DNA polymerase [Candidatus Puniceispirillum marinum IMCC1322]
gi|292663533|gb|ADE38634.1| DNA polymerase [Candidatus Puniceispirillum marinum IMCC1322]
Length = 587
Score = 44.7 bits (104), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 74/170 (43%), Gaps = 25/170 (14%)
Query: 526 SGTLTRRAVEATWMTAS-NAVGERVGSELRAMIQAPDGYSIIGADVDSQEL-WIASVIGD 583
+G +T RA + TA +V G E R + P+GYS++G+D+ EL +A+V+ D
Sbjct: 338 NGAVTGRATHFNFNTAQVPSVRAPYGKECRELFGVPEGYSLVGSDLSGVELRCLANVLQD 397
Query: 584 SYCAKEHGATPLGWMTLSGQKSNA---TDMHSITAKAVGI-SREHAKIINYARIYGAGE- 638
G+ +N D+H ++G+ SR+ AK Y IYG G+
Sbjct: 398 -----------------QGKYANIILNADIHLANMHSMGLTSRDQAKTAIYCMIYGGGDA 440
Query: 639 RFAERLLKQFNPEMSKSDAKSKARKMYT-LTKGKKLYRLKDGHLEELIKR 687
R E + K + + KA + L + K K GHL L R
Sbjct: 441 RLGEVVGKGAAEGRTLRNNFMKANPAFADLVRQLKQVVTKRGHLVGLDGR 490
>gi|262342111|gb|ACY54566.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 192
Score = 44.7 bits (104), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 55/114 (48%), Gaps = 14/114 (12%)
Query: 551 SELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDM 610
R + G ++GAD+ EL + + Y A+ G + L+G D+
Sbjct: 10 GRFRELFIPSPGQLMVGADLSGIELRMLA----HYLARYDGGR-YADILLNG------DI 58
Query: 611 HSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKM 664
H + A +GISR K + YA +YGAG+ ++ F+ +S++ AK K +++
Sbjct: 59 HQVNADKIGISRREVKTVTYAFLYGAGD---AKIGTSFDSSLSETKAKKKGKEI 109
>gi|262342115|gb|ACY54568.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 187
Score = 44.7 bits (104), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 55/111 (49%), Gaps = 15/111 (13%)
Query: 554 RAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMHSI 613
R + A G ++GAD+ EL + S Y A+ T G L+G D+H +
Sbjct: 13 RRLFMATPGQVMVGADLSGIELRMLS----HYLARYD--TYFGDNLLNG------DVHQL 60
Query: 614 TAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKM 664
+GI+R+ K + YA +YGAG E++ ++ +S AK+K R++
Sbjct: 61 NTDKIGITRKLVKTVTYAFLYGAGN---EKIGYSYDRLLSSQKAKAKGREI 108
>gi|395225497|ref|ZP_10404019.1| DNA polymerase I [Thiovulum sp. ES]
gi|394446344|gb|EJF07176.1| DNA polymerase I [Thiovulum sp. ES]
Length = 871
Score = 44.3 bits (103), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 51/263 (19%), Positives = 97/263 (36%), Gaps = 69/263 (26%)
Query: 549 VGSELRAMIQAPDGYSIIGADVDSQEL-WIASVIGDSYCAKEHGATPLGWMTLSGQKSNA 607
VG+ +R A DGYS++ D EL +A GD + N
Sbjct: 640 VGNRIRRAFIAKDGYSLLSLDYSQIELRLLAHFSGDEQLVENF--------------QNG 685
Query: 608 TDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTL 667
D+H A+ + I R AK +N+ +YG G + L ++ K +A + +
Sbjct: 686 VDVHGYLAEKLKIKRSTAKTVNFGVLYGMGSMKLSKTL-----DIPKDEASKIIENFFEI 740
Query: 668 TKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQWYGGTESAMFNRLE 727
G K + + +L E E S + V+ +F + +++ ++
Sbjct: 741 YSGVKEFNQPENYLSE------------EGNSFF---VETLFGRTRYFDFPKNG------ 779
Query: 728 EIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLVCMRWLVS 787
+++S+ + N + Q A D + ++ + +S
Sbjct: 780 -------------------------KEESELYRESFNTIFQGSASDLIKEAMIQIDSEIS 814
Query: 788 R---DTRFVISIHDEIRYLVPDE 807
D + ++ IHDE+ + V DE
Sbjct: 815 EKNLDVKMLLQIHDELIFEVKDE 837
>gi|229472477|gb|ACQ72753.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 192
Score = 43.9 bits (102), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 54/113 (47%), Gaps = 14/113 (12%)
Query: 552 ELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMH 611
E R + +A G ++GAD+ EL + Y + L D+H
Sbjct: 11 EFRKLFRASPGQRMVGADLSGVELRCLAHYLARYDEGRYREVLLN-----------DDIH 59
Query: 612 SITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKM 664
+ A +GISR+ K + YA +YGAG+ +++ ++ +S + AK+K +++
Sbjct: 60 QVNADKIGISRKLVKTVTYAFLYGAGD---QKIGLSYDKSLSPNKAKAKGKEI 109
>gi|341584358|ref|YP_004764849.1| DNA polymerase I [Rickettsia heilongjiangensis 054]
gi|340808583|gb|AEK75171.1| DNA polymerase I [Rickettsia heilongjiangensis 054]
Length = 875
Score = 43.9 bits (102), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 100/265 (37%), Gaps = 66/265 (24%)
Query: 550 GSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATD 609
G+++R A +GY +I AD EL I S I + K+ TL+ +
Sbjct: 635 GNQIRQAFIAEEGYKLISADYSQIELRILSHIANIDALKQAFINKDDIHTLTACQIFNLQ 694
Query: 610 MHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTK 669
H +T++ R AK IN+ IYG A L KQ N
Sbjct: 695 KHKLTSE----HRRKAKAINFGIIYGIS---AFGLAKQLN-------------------- 727
Query: 670 GKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQWYGGTESAMFNRLEEI 729
+ +G E IK+ +++Y+ G + M + +
Sbjct: 728 ------VTNGEASEYIKKYFAEYK-----------------------GVQEYM-EQTKAF 757
Query: 730 ATSLQPVTPFLNCRLSRALEPVSEDD--SKFIQ-TRINWVVQSGAVDFLHLMLVCMRWLV 786
A+S VT NC + P+ D +F + IN +Q D + + ++ + +
Sbjct: 758 ASSNGYVT---NCFGRKCFVPLIHDKKLKQFAERAAINAPIQGTNADIIKIAMINLDQEI 814
Query: 787 SR---DTRFVISIHDEIRYLVPDEE 808
+ TR V+ IHDE+ + P +E
Sbjct: 815 EKRKLKTRLVLQIHDELLFEAPIDE 839
>gi|262212353|gb|ACY35793.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 190
Score = 43.5 bits (101), Expect = 0.47, Method: Composition-based stats.
Identities = 32/106 (30%), Positives = 51/106 (48%), Gaps = 12/106 (11%)
Query: 550 GSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATD 609
G E R + A G ++GAD+ EL + + Y A+ G + L+G D
Sbjct: 9 GPEFRRLFTATPGQVMVGADLSGIELRMLA----HYLARYDGGR-YADILLNG------D 57
Query: 610 MHSITAKAVGISREHAKIINYARIYGAGE-RFAERLLKQFNPEMSK 654
+H + A +GI+R+ K + YA +YGAG+ + KQ P +K
Sbjct: 58 IHQVNADKIGITRKLVKNVTYAFLYGAGDVKIGLTYDKQLPPNKAK 103
>gi|291335807|gb|ADD95407.1| hypothetical protein [uncultured phage MedDCM-OCT-S05-C849]
Length = 124
Score = 43.5 bits (101), Expect = 0.49, Method: Composition-based stats.
Identities = 27/86 (31%), Positives = 43/86 (50%), Gaps = 11/86 (12%)
Query: 552 ELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMH 611
E R + A G +++GAD+ EL + + Y + G + L+G D+H
Sbjct: 9 EFRELFTASPGMTMVGADLAGIELRMLA----HYLGRYDGGR-YADILLNG------DIH 57
Query: 612 SITAKAVGISREHAKIINYARIYGAG 637
+ A +GISR K ++YA +YGAG
Sbjct: 58 QVNADKIGISRRQVKTVSYAYLYGAG 83
>gi|229472395|gb|ACQ72712.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 192
Score = 43.5 bits (101), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 35/56 (62%), Gaps = 3/56 (5%)
Query: 609 DMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKM 664
D+H + A +GISR+ K + YA +YGAG+ E++ ++ +S DAK K +++
Sbjct: 57 DIHQVNADKIGISRKLVKTVTYAFLYGAGD---EKIGHSYDKLLSSKDAKKKGKEI 109
>gi|317487299|ref|ZP_07946094.1| DNA polymerase family A [Bilophila wadsworthia 3_1_6]
gi|316921489|gb|EFV42780.1| DNA polymerase family A [Bilophila wadsworthia 3_1_6]
Length = 626
Score = 43.5 bits (101), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 70/162 (43%), Gaps = 29/162 (17%)
Query: 509 IESEGRDYGVILPQLIVSGTLTRRAVEATWMTASNAVGERVGSELRAMIQAPDGYSIIGA 568
+ +GR +G ++I +G +T R + A + G + RA+ AP +GA
Sbjct: 349 VGPDGRIHG----RVITNGAVTGRCTHNSPNLAQIPARGQYGKQCRALFAAPPPLVQVGA 404
Query: 569 DVDSQEL-----WIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMHSITAKAVGI-SR 622
D EL ++A+ G +Y + L G D+H+ A G+ +R
Sbjct: 405 DASGLELRMLAHYLAAYDGGAYAK----------VLLEG------DIHTANQHAAGLETR 448
Query: 623 EHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKM 664
++AK YA +YGAG+ E+L P S + + R +
Sbjct: 449 DNAKTFIYAFLYGAGD---EKLGSIVAPLASSAVQTKRGRAL 487
>gi|229472185|gb|ACQ72607.1| DNA polymerase [Uncultured T7-like podovirus]
gi|229472199|gb|ACQ72614.1| DNA polymerase [Uncultured T7-like podovirus]
gi|229472315|gb|ACQ72672.1| DNA polymerase [Uncultured T7-like podovirus]
gi|262342203|gb|ACY54612.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 192
Score = 43.5 bits (101), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 35/56 (62%), Gaps = 3/56 (5%)
Query: 609 DMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKM 664
D+H + A +GISR+ K + YA +YGAG+ E++ ++ +S DAK K +++
Sbjct: 57 DIHQVNADKIGISRKLVKTVTYAFLYGAGD---EKIGHSYDKLLSSKDAKKKGKEI 109
>gi|32442301|gb|AAP82221.1| DNA polymerase [Podovirus GOM]
Length = 399
Score = 43.1 bits (100), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 73/180 (40%), Gaps = 43/180 (23%)
Query: 509 IESEGRDYGVILPQLIVSGTLTRRAVEATWMTAS-NAVGERVGSELRAMIQAPDGYSIIG 567
+E GR +G ++ G++T R + A +V G E R + AP+G+ +G
Sbjct: 233 LERNGRIHG----RVNTMGSVTSRCSHSHPNLAQIPSVSAPYGKECRELFCAPEGFRFLG 288
Query: 568 ADVDSQEL-----WIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMHSITAKAVGIS- 621
D+ EL ++A Y G+K D+H++ A G+S
Sbjct: 289 VDISGLELRCLAHYMALFDNGDY----------------GKKLLEDDIHTVNQNAAGLST 332
Query: 622 REHAKIINYARIYGAGE---------------RFAERLLKQFNP-EMSKSDAKSKARKMY 665
R AK YA +YGAG+ + +R L Q E ++ K KA+K Y
Sbjct: 333 RNQAKTFIYAFLYGAGDEKIGSIVGGSSEEGAKLKKRFLSQIPALEKLRNAVKKKAQKGY 392
>gi|262212121|gb|ACY35677.1| DNA polymerase [Uncultured T7-like podovirus]
gi|262212127|gb|ACY35680.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 192
Score = 43.1 bits (100), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 35/56 (62%), Gaps = 3/56 (5%)
Query: 609 DMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKM 664
D+H + A +GISR+ K + YA +YGAG+ E++ ++ +S DAK K +++
Sbjct: 57 DIHQVNADKIGISRKLVKTVTYAFLYGAGD---EKIGHSYDKLLSSKDAKKKGKEI 109
>gi|313892512|ref|ZP_07826101.1| DNA-directed DNA polymerase [Dialister microaerophilus UPII 345-E]
gi|313119091|gb|EFR42294.1| DNA-directed DNA polymerase [Dialister microaerophilus UPII 345-E]
Length = 626
Score = 43.1 bits (100), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 63/135 (46%), Gaps = 17/135 (12%)
Query: 506 VENIESEGRDYGVILPQLIVSGTLTRRAVEATWMTAS-NAVGERVGSELRAMIQAPDGYS 564
+++++S+G+ +G + P +GT+T RA + A VG G E R + P G++
Sbjct: 340 LKHVKSDGKIHGRVNP----NGTVTGRATHSNPNVAQVPHVGTPYGEECRKLFNVPQGWT 395
Query: 565 IIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMHSITAKAVGI-SRE 623
G D EL + H +P + + + D+H+ KA G+ +R
Sbjct: 396 QAGIDACGLELRCLA----------HYLSPYDKGKYAHEVVHG-DIHTSNQKAAGLATRN 444
Query: 624 HAKIINYARIYGAGE 638
AK YA +YGAG+
Sbjct: 445 LAKTFIYAFLYGAGD 459
>gi|350273909|ref|YP_004885222.1| DNA polymerase I [Rickettsia japonica YH]
gi|348593122|dbj|BAK97083.1| DNA polymerase I [Rickettsia japonica YH]
Length = 875
Score = 43.1 bits (100), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 61/271 (22%), Positives = 100/271 (36%), Gaps = 78/271 (28%)
Query: 550 GSELRAMIQAPDGYSIIGADVDSQELWIASVIGD------SYCAKEHGATPLGWMTLSGQ 603
G+++R A +GY +I AD EL I S I + ++ K+ T + Q
Sbjct: 635 GNQIRQAFIAEEGYKLISADYSQIELRILSHIANIDALKQAFINKDDIHTLTACQIFNLQ 694
Query: 604 KSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARK 663
K T+ H R AK IN+ IYG A L KQ N
Sbjct: 695 KHKLTNEH----------RRKAKAINFGIIYGIS---AFGLAKQLN-------------- 727
Query: 664 MYTLTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQWYGGTESAMF 723
+ +G E IK+ +++Y+ G + M
Sbjct: 728 ------------VTNGEASEYIKKYFAEYK-----------------------GVQEYM- 751
Query: 724 NRLEEIATSLQPVTPFLNCRLSRALEPVSEDD--SKFIQ-TRINWVVQSGAVDFLHLMLV 780
+ + A+S VT NC + P+ D +F + IN +Q D + + ++
Sbjct: 752 EQTKAFASSNGYVT---NCFGRKCFVPLIHDKKLKQFAERAAINAPIQGTNADIIKIAMI 808
Query: 781 CMRWLVSR---DTRFVISIHDEIRYLVPDEE 808
+ + + TR V+ IHDE+ + P +E
Sbjct: 809 NLDQEIEKRKLKTRLVLQIHDELLFEAPIDE 839
>gi|229472433|gb|ACQ72731.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 192
Score = 43.1 bits (100), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 57/119 (47%), Gaps = 17/119 (14%)
Query: 551 SELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDM 610
R + + G ++GAD+ EL + + Y A+ + + + L+G D+
Sbjct: 10 GRFRELFKPTPGQVMVGADLSGIELRMLA----HYLAR-YDSGRYADILLNG------DI 58
Query: 611 HSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKA---RKMYT 666
H + A +GISR+ K + YA +YGAG+ ++ K + +S AK+K RK Y
Sbjct: 59 HQVNADKIGISRKQVKTVTYAFLYGAGD---VKIGKSLDSSLSDKKAKAKGSEIRKAYV 114
>gi|262212395|gb|ACY35814.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 181
Score = 43.1 bits (100), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 54/111 (48%), Gaps = 15/111 (13%)
Query: 554 RAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMHSI 613
R + A G ++GAD+ EL + S Y A+ T G L+G D+H +
Sbjct: 7 RRLFMATPGQVMVGADLSGIELRMLS----HYLARYD--TYFGDNLLNG------DIHQL 54
Query: 614 TAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKM 664
A +GI R+ K + YA +YGAG E++ ++ +S K+K R++
Sbjct: 55 NADKIGIIRKLVKTVTYAFLYGAGN---EKIGYSYDRLLSPQKVKAKGREI 102
>gi|262212347|gb|ACY35790.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 187
Score = 43.1 bits (100), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 54/111 (48%), Gaps = 15/111 (13%)
Query: 554 RAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMHSI 613
R + A G +GAD+ EL + S Y A+ T G L+G D+H +
Sbjct: 13 RRLFMATPGQVTVGADLSGIELRMLS----HYLARYD--TYFGDNLLNG------DIHQL 60
Query: 614 TAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKM 664
A +G +R+ K + YA +YGAG E++ ++ +S AK+K R++
Sbjct: 61 NADKIGTARKLVKTVTYAFLYGAGN---EKIGYSYDRLLSPQKAKAKGREI 108
>gi|262212077|gb|ACY35655.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 192
Score = 43.1 bits (100), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 35/56 (62%), Gaps = 3/56 (5%)
Query: 609 DMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKM 664
D+H + A +GISR+ K + YA +YGAG+ E++ ++ +S DAK K +++
Sbjct: 57 DIHRVNADKIGISRKLVKTVTYAFLYGAGD---EKIGHSYDKLLSSKDAKKKGKEI 109
>gi|291335762|gb|ADD95365.1| hypothetical protein [uncultured phage MedDCM-OCT-S05-C243]
Length = 237
Score = 42.7 bits (99), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 47/109 (43%), Gaps = 14/109 (12%)
Query: 552 ELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMH 611
E R + A G ++GAD+ EL + + Y + L D+H
Sbjct: 96 EFRELFTASPGMVMVGADLSGIELRMLAHYLGRYDGGRYADILLN-----------DDIH 144
Query: 612 SITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSK 660
+ A +GI+R K + YA +YGAG E+L ++ + +AK +
Sbjct: 145 QVNADKIGITRRQVKTVTYAFLYGAGN---EKLGTSYDNSLQPKEAKKR 190
>gi|383501239|ref|YP_005414598.1| DNA polymerase I [Rickettsia australis str. Cutlack]
gi|378932250|gb|AFC70755.1| DNA polymerase I [Rickettsia australis str. Cutlack]
Length = 872
Score = 42.7 bits (99), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 59/268 (22%), Positives = 99/268 (36%), Gaps = 72/268 (26%)
Query: 550 GSELRAMIQAPDGYSIIGADVDSQELWIASVIGD------SYCAKEHGATPLGWMTLSGQ 603
G+++R A GY +I AD EL I S I + ++ K+ T + Q
Sbjct: 632 GNKIRQAFIAEKGYKLISADYSQIELRILSHIANIDTLKQAFINKDDIHTQTACQIFNLQ 691
Query: 604 KSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARK 663
K T H R AK IN+ IYG A L KQ N +S S+A +K
Sbjct: 692 KHELTSEH----------RRKAKAINFGIIYGIS---AFGLAKQLN--VSNSEASEYIKK 736
Query: 664 MYTLTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQWYGGTESAMF 723
+ KG + Y E + ++ N V F + +
Sbjct: 737 YFAEYKGVQEYM-----------------EQTKAFASSNGYVINFFGRKCF--------- 770
Query: 724 NRLEEIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLVCMR 783
P ++ + L+ +E + IN +Q D + + ++ +
Sbjct: 771 -------------VPLIH---DKKLKQFAE------RAAINAPIQGTNADIIKIAMINLD 808
Query: 784 WLVSRD---TRFVISIHDEIRYLVPDEE 808
+ ++ TR V+ IHDE+ + P++E
Sbjct: 809 QEIEKNKLKTRLVLQIHDELLFEAPEDE 836
>gi|453054961|gb|EMF02409.1| gp44 [Streptomyces mobaraensis NBRC 13819 = DSM 40847]
Length = 626
Score = 42.7 bits (99), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 67/151 (44%), Gaps = 28/151 (18%)
Query: 488 VKKQFVVWLNKKDLPRRLVENIESEGRDYGVILPQLIVSGTLTRRAVEATWMTASNAVGE 547
+K+ WL R +E+++S GR + I + + + + A + + +
Sbjct: 321 ARKKRNTWL------RSFLESVDSNGRIHPSINSIQARTARQSIQGIPAQTLPSGD---- 370
Query: 548 RVGSELRAMIQAPDGYSIIGADVDSQEL-WIASVIGDSYCAKEHGATPLGWMTLSGQKSN 606
E+RA +A +G+ ++ D + EL ++A+ GD + N
Sbjct: 371 ---YEIRACFEANEGHIVLSTDYSNMELRFLAAHSGDKRMLRAF--------------RN 413
Query: 607 ATDMHSITAKAVGISREHAKIINYARIYGAG 637
D+H +TA A G+SR+ K+ N+ ++G G
Sbjct: 414 GEDLHQVTATAAGVSRKLGKMTNFLIVFGGG 444
>gi|262212393|gb|ACY35813.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 187
Score = 42.4 bits (98), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 55/111 (49%), Gaps = 15/111 (13%)
Query: 554 RAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMHSI 613
R + A G ++GAD+ EL + S Y A+ T G L+G D+H +
Sbjct: 13 RRLFMATPGQVMVGADLSGIELRMLS----HYLARYD--TYFGDNLLNG------DIHQL 60
Query: 614 TAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKM 664
A +GI+R+ K + YA + GAG E++ ++ +S AK+K R++
Sbjct: 61 NADKIGITRKLVKTVTYAFLCGAGN---EKIGYSYDRLLSPQKAKAKGREI 108
>gi|120553478|ref|YP_957829.1| DNA polymerase I [Marinobacter aquaeolei VT8]
gi|120323327|gb|ABM17642.1| DNA polymerase I [Marinobacter aquaeolei VT8]
Length = 908
Score = 42.4 bits (98), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 70/157 (44%), Gaps = 26/157 (16%)
Query: 497 NKKDLPRRLVEN--IESEGRDYGVILPQLI--VSG---TLTRRAVEATWMTASN------ 543
++ +LPR +VE+ + Y LP+LI +G T +AV AT +S+
Sbjct: 598 HEHELPRLIVEHRSLSKLKSTYTDTLPELIHHRTGRVHTSYHQAVTATGRLSSSEPNLQN 657
Query: 544 -AVGERVGSELRAMIQAPDGYSIIGADVDSQELWI-ASVIGDS--YCAKEHGATPLGWMT 599
+ + G +R AP GY ++ AD EL I A + GD A EHG
Sbjct: 658 IPIRTQEGRRIRQAFIAPKGYKLLAADYSQIELRIMAHLSGDRGLLTAFEHGE------- 710
Query: 600 LSGQKSNATDMHSITAKAV-GISREHAKIINYARIYG 635
K+ A ++ +T V G R AK IN+ IYG
Sbjct: 711 -DIHKATAAEVFGVTVDEVTGDQRRSAKAINFGLIYG 746
>gi|262342233|gb|ACY54627.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 167
Score = 42.4 bits (98), Expect = 1.3, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
Query: 609 DMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKM 664
D+H + A +GISR+ K + YA +YGAG+ E++ ++ +S AK K +++
Sbjct: 57 DIHQVNADKIGISRKLVKTVTYAFLYGAGD---EKIGHSYDKLLSSQAAKKKGKEI 109
>gi|387812902|ref|YP_005428379.1| DNA polymerase I [Marinobacter hydrocarbonoclasticus ATCC 49840]
gi|381337909|emb|CCG93956.1| multifunctional DNA polymerase I: 5'->3' exonuclease (N-terminal);
3'->5' polymerase; 3'->5' exonuclease (C-terminal)
[Marinobacter hydrocarbonoclasticus ATCC 49840]
Length = 965
Score = 42.4 bits (98), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 70/157 (44%), Gaps = 26/157 (16%)
Query: 497 NKKDLPRRLVEN--IESEGRDYGVILPQLI--VSG---TLTRRAVEATWMTASN------ 543
++ +LPR +VE+ + Y LP+LI +G T +AV AT +S+
Sbjct: 655 HEHELPRLIVEHRSLSKLKSTYTDTLPELIHHRTGRVHTSYHQAVTATGRLSSSEPNLQN 714
Query: 544 -AVGERVGSELRAMIQAPDGYSIIGADVDSQELWI-ASVIGDS--YCAKEHGATPLGWMT 599
+ + G +R AP GY ++ AD EL I A + GD A EHG
Sbjct: 715 IPIRTQEGRRIRQAFIAPKGYKLLAADYSQIELRIMAHLSGDRGLLTAFEHGE------- 767
Query: 600 LSGQKSNATDMHSITAKAV-GISREHAKIINYARIYG 635
K+ A ++ +T V G R AK IN+ IYG
Sbjct: 768 -DIHKATAAEVFGVTVDEVTGDQRRSAKAINFGLIYG 803
>gi|354464510|gb|AER26422.1| gp38 [Mycobacterium phage Saintus]
Length = 614
Score = 42.0 bits (97), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 63/140 (45%), Gaps = 33/140 (23%)
Query: 553 LRAMIQAPDGYSIIGADVDSQELWI-ASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMH 611
+R A +G+ + D +QEL + AS+ GD K + + D+H
Sbjct: 380 VRRCFLADEGHLMASVDYQTQELRVLASLAGDPTMLKAF--------------AESEDLH 425
Query: 612 SITAKAVGISREHAKIINYARIYGAGER-----------FAERLLKQFN------PEMSK 654
ITA A G+ R+ K+ N+ +YG G + A+++L F+ +++K
Sbjct: 426 QITADAAGVDRKVGKMANFLTVYGGGPKALAEQATIPVEVAKQVLAAFSVTYPKVDQLAK 485
Query: 655 SDAKSKARKMYTLTK-GKKL 673
A +R+ Y +T G++L
Sbjct: 486 KVADKASRQGYIVTPVGRRL 505
>gi|32442289|gb|AAP82215.1| DNA polymerase [Podovirus SOG]
Length = 400
Score = 42.0 bits (97), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 55/127 (43%), Gaps = 20/127 (15%)
Query: 514 RDYGVILPQLIVSGTLTRRAVEATWMTASNAVGERVGSELRAMIQAPDGYSIIGADVDSQ 573
R +G ++P ++G +T R M G G E R+ P+G ++G D
Sbjct: 242 RVHGSVIPNGTITGRMTHRNPN---MAQVPNAGSPYGKECRSCWTIPEGRKLVGIDASGL 298
Query: 574 EL-WIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMHSITAKAVGI-SREHAKIINYA 631
EL +A + D +E ++G D+H+ G+ +R+ AK YA
Sbjct: 299 ELRMLAHYMNDPEYIEE---------VVNG------DIHTTNQNLAGLKTRDQAKTFIYA 343
Query: 632 RIYGAGE 638
+YGAG+
Sbjct: 344 LVYGAGD 350
>gi|392284506|gb|AFM54934.1| gp42 [Mycobacteriophage Astro]
Length = 614
Score = 42.0 bits (97), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 63/140 (45%), Gaps = 33/140 (23%)
Query: 553 LRAMIQAPDGYSIIGADVDSQELWI-ASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMH 611
+R A +G+ + D +QEL + AS+ GD K + + D+H
Sbjct: 380 VRRCFLADEGHLMASVDYQTQELRVLASLAGDPTMLKAF--------------AESEDLH 425
Query: 612 SITAKAVGISREHAKIINYARIYGAGER-----------FAERLLKQFN------PEMSK 654
ITA A G+ R+ K+ N+ +YG G + A+++L F+ +++K
Sbjct: 426 QITADAAGVDRKVGKMANFLTVYGGGPKALAEQATIPVEVAKQVLAAFSVTYPKVDQLAK 485
Query: 655 SDAKSKARKMYTLTK-GKKL 673
A +R+ Y +T G++L
Sbjct: 486 KVADKASRQGYIVTPVGRRL 505
>gi|262212123|gb|ACY35678.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 192
Score = 42.0 bits (97), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
Query: 609 DMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKM 664
D+H + A +GISRE K + YA +YGAG+ E++ ++ +S AK K +++
Sbjct: 57 DIHQVNADKIGISRELVKTVTYAFLYGAGD---EKIGHSYDKLLSSQAAKKKGKEI 109
>gi|229472613|gb|ACQ72821.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 196
Score = 42.0 bits (97), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 55/112 (49%), Gaps = 14/112 (12%)
Query: 553 LRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMHS 612
R + A G+ ++GAD+ EL + + Y A+ + G + L G D+H
Sbjct: 12 FRRLFCASPGHIMVGADLSGIELRMLA----HYLAR-YDDGRYGDILLHG------DIHQ 60
Query: 613 ITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKM 664
A +GISR K + YA +YGAG+ +R+ + ++ + AK K +++
Sbjct: 61 ENADKIGISRRLVKTVTYASLYGAGD---QRIGESYDQSLPPDKAKQKGKEI 109
>gi|319789775|ref|YP_004151408.1| DNA polymerase I [Thermovibrio ammonificans HB-1]
gi|317114277|gb|ADU96767.1| DNA polymerase I [Thermovibrio ammonificans HB-1]
Length = 829
Score = 42.0 bits (97), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 77/361 (21%), Positives = 136/361 (37%), Gaps = 100/361 (27%)
Query: 503 RRLVENIESEGRDYGVILPQLIVSGTLTRRAVEATWMTASNAVGERVGSELRAMIQAPDG 562
+ L++ I+ GR +G I +GT T R A + V + + +R ++AP+G
Sbjct: 551 KALLKRIDETGRVHG----NFIQTGTATGRLSSAEPNLQNLPVSDPLSLRVRRAVRAPEG 606
Query: 563 YSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMHSITAKAVGISR 622
Y+++ AD EL I + + E L G+ D+H+ TAK + +R
Sbjct: 607 YTLVWADYSQVELRILAHLSQDRNLIE--------AFLKGE-----DIHTETAKHLFHTR 653
Query: 623 E-------HAKIINYARIYGAGER-FAERLLKQFNPEMSKSDAKSKARKMYTLTKGKKLY 674
+ AK +N+ IYG AERL + +AK + + +K
Sbjct: 654 QITDRERRVAKTVNFGIIYGMSPHGLAERL------SIPLQEAKDYIERYF-----QKFP 702
Query: 675 RLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQWYGGTESAMFNRLEEIATSLQ 734
++++ +EE ++ Y K G E+A R
Sbjct: 703 KVRE-FIEETVREAYKK------------------------GFVETAFGRR--------- 728
Query: 735 PVTPFLNCRLSRALEPVSEDDSKFIQTR-------INWVVQSGAVDFLHLMLVCMRWLVS 787
P+ E K R +N V+Q A D + + +V ++
Sbjct: 729 --------------RPLPELKEKSFHKRSFGERAAVNTVIQGTAADIMKMAMVNLQPEAE 774
Query: 788 RDTRFVI-SIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIPLSISFFSGV 846
+ ++I +HDE+ P E E +A V ++ A + +PL++ SG
Sbjct: 775 KLNSYIILQVHDELVLEAP--EGAEEEVAAKVKQVMEGAANL------SVPLTVEVKSGK 826
Query: 847 E 847
E
Sbjct: 827 E 827
>gi|32442291|gb|AAP82216.1| DNA polymerase [Podovirus SOG]
Length = 401
Score = 41.6 bits (96), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 60/135 (44%), Gaps = 20/135 (14%)
Query: 506 VENIESEGRDYGVILPQLIVSGTLTRRAVEATWMTASNAVGERVGSELRAMIQAPDGYSI 565
++ +E +GR +G ++P ++G ++ + A V G E RA +G +
Sbjct: 235 LDALEEDGRVHGSVIPNGTITGRMSHNHPNVAQVPA---VYSPFGVECRACWTVEEGNVL 291
Query: 566 IGADVDSQEL-WIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMHSITAKAVGI-SRE 623
+G D EL +A + D E ++G D+H+ K G+ SR+
Sbjct: 292 VGVDASGLELRMLAHYMNDEEYINE---------VVNG------DIHTTNQKLAGLESRD 336
Query: 624 HAKIINYARIYGAGE 638
AK YA +YGAG+
Sbjct: 337 TAKTFIYALVYGAGD 351
>gi|388483863|ref|YP_006355438.1| T7-like DNA polymerase nucleotidyl transferase [Prochlorococcus
phage P-SSP7]
gi|388482649|gb|AFK33157.1| T7-like DNA polymerase nucleotidyl transferase [Prochlorococcus
phage P-SSP7]
Length = 423
Score = 41.6 bits (96), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 38/86 (44%), Gaps = 11/86 (12%)
Query: 552 ELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMH 611
E R + A G +++GAD+ EL + + Y + L D+H
Sbjct: 194 EFRELFTASPGMTMVGADLSGIELRMLAHYLGRYDGGRYADILLN-----------DDIH 242
Query: 612 SITAKAVGISREHAKIINYARIYGAG 637
+ A +GI+R K + YA +YGAG
Sbjct: 243 QVNADKIGITRRQVKTVTYAFLYGAG 268
>gi|262342141|gb|ACY54581.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 190
Score = 41.6 bits (96), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 74/157 (47%), Gaps = 22/157 (14%)
Query: 552 ELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMH 611
+ R + A G ++GAD+ EL + + Y ++ G + L G D+H
Sbjct: 11 DFRQLFMATPGQIMVGADLSGIELRMLA----HYLSRFDGGR-YAEILLHG------DIH 59
Query: 612 SITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKGK 671
A +GISR K + YA +YGAG+ +L + ++P++++ +AK K +++ +
Sbjct: 60 QENADKIGISRRQVKTVTYAFLYGAGD---AKLGRSYDPQLTEKEAKKKGKEI------R 110
Query: 672 KLYRLKDGHLEELIKRVYSKYEAREV--CSAYNTSVD 706
+ Y LE L+ V SK E + C +VD
Sbjct: 111 QAYMDAVPGLETLVTAVKSKAELGYINLCDGRRCAVD 147
>gi|229472265|gb|ACQ72647.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 196
Score = 41.6 bits (96), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 55/112 (49%), Gaps = 14/112 (12%)
Query: 553 LRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMHS 612
R + A G+ ++GAD+ EL + + Y A+ + G + L G D+H
Sbjct: 12 FRRLFCASPGHIMVGADLSGIELRMLA----HYLAR-YDDGRYGDILLHG------DIHQ 60
Query: 613 ITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKM 664
A +GISR K + YA +YGAG+ +R+ + ++ + AK K +++
Sbjct: 61 ENADKIGISRRLVKTVTYAFLYGAGD---QRIGESYDQSLPPDKAKQKGKEI 109
>gi|229472485|gb|ACQ72757.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 192
Score = 41.2 bits (95), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 35/56 (62%), Gaps = 3/56 (5%)
Query: 609 DMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKM 664
D+H + A +GISR+ K + YA +YGAG+ E++ ++ +S + AK K +++
Sbjct: 57 DIHQVNADKIGISRKLVKTVTYAFLYGAGD---EKIGHSYDKLLSSAKAKRKGKEI 109
>gi|229472369|gb|ACQ72699.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 190
Score = 41.2 bits (95), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 55/113 (48%), Gaps = 14/113 (12%)
Query: 552 ELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMH 611
+ R + QA ++GAD+ EL + + Y A+ + + L+G D+H
Sbjct: 11 QFRELFQASPSMVMVGADLAGIELRMLA----HYLAR-YDEGRYADILLNG------DIH 59
Query: 612 SITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKM 664
A +GISR K + YA +YGAG+ ++ ++P++S A +K ++
Sbjct: 60 QENADKIGISRRQVKTVTYAFLYGAGD---NKIGLSYDPQLSSKQATAKGEEI 109
>gi|262342309|gb|ACY54665.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 192
Score = 41.2 bits (95), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 55/115 (47%), Gaps = 14/115 (12%)
Query: 550 GSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATD 609
G R + G ++GAD+ EL + S + C A L L+G D
Sbjct: 9 GHRFRELFIPTPGQVMVGADLAGIELRMLSHF-LARCDNGRYADIL----LNG------D 57
Query: 610 MHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKM 664
+H + A +GISR+ K + YA +YGAG+ E++ ++ +S AK K +++
Sbjct: 58 IHQVNADKIGISRKLVKTVTYAFLYGAGD---EKIGHSYDKLLSSQAAKKKGKEI 109
>gi|156122484|gb|ABU50233.1| DNA polymerase [Cyanophage S-CBP1]
Length = 586
Score = 41.2 bits (95), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 55/112 (49%), Gaps = 14/112 (12%)
Query: 553 LRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMHS 612
R + A G+ ++GAD+ EL + + Y A+ + G + L G D+H
Sbjct: 354 FRRLFCASPGHIMVGADLSGIELRMLA----HYLAR-YDDGRYGDILLHG------DIHQ 402
Query: 613 ITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKM 664
A +GISR K + YA +YGAG+ +++ ++ +S AK K +++
Sbjct: 403 ENADKIGISRRLVKTVTYAFLYGAGD---QKIGLSYDQGLSPDKAKQKGKEI 451
>gi|325680927|ref|ZP_08160464.1| DNA-directed DNA polymerase [Ruminococcus albus 8]
gi|324107391|gb|EGC01670.1| DNA-directed DNA polymerase [Ruminococcus albus 8]
Length = 857
Score = 41.2 bits (95), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 45/103 (43%), Gaps = 24/103 (23%)
Query: 545 VGERVGSELRAMIQAPDGYSIIGADVDSQELWI-ASVIGDSYCAKEHGATPLGWMTLSGQ 603
V + +G +R A DGY+ + AD EL + A V GD K
Sbjct: 609 VRKEIGRNMRKFFVAGDGYTFLDADYSQIELRVLAEVCGDENMRKTF------------- 655
Query: 604 KSNATDMHSITAKAV-GIS--------REHAKIINYARIYGAG 637
++ TD+H++TA V GI R AK +N+ IYG G
Sbjct: 656 -ADGTDIHTMTASQVFGIPADAVLPEMRSAAKAVNFGIIYGIG 697
>gi|262212411|gb|ACY35822.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 187
Score = 41.2 bits (95), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 55/111 (49%), Gaps = 15/111 (13%)
Query: 554 RAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMHSI 613
R + A G ++ AD+ EL + + Y A+ T G L+G D+H I
Sbjct: 13 RRLFMATPGQVMVVADLSGIELRMLA----HYLARYD--TYFGDNLLNG------DIHQI 60
Query: 614 TAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKM 664
A +GISR+ K + YA +YGAG E++ ++ +S AK+K R++
Sbjct: 61 NADKIGISRKLVKTVCYAFLYGAG---LEKIGYSYDRLLSPQKAKAKGREI 108
>gi|262342227|gb|ACY54624.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 192
Score = 40.8 bits (94), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 57/113 (50%), Gaps = 14/113 (12%)
Query: 552 ELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMH 611
LR + G ++GAD+ EL + S Y ++G + + L+G D+H
Sbjct: 11 RLRELFIPTPGQVMVGADLAGIELRMLSHFLARY---DNGRYAV--ILLNG------DIH 59
Query: 612 SITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKM 664
+ A +GISR+ + + YA +YGAG+ E++ ++ +S AK K +++
Sbjct: 60 QVNADKIGISRKLVRTVTYAFLYGAGD---EKIGHSYDKLLSSQAAKKKGKEI 109
>gi|262212065|gb|ACY35649.1| DNA polymerase [Uncultured T7-like podovirus]
gi|262212229|gb|ACY35731.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 192
Score = 40.8 bits (94), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
Query: 609 DMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKM 664
D+H + A +GISR+ K + YA +YGAG+ E++ ++ +S AK K +++
Sbjct: 57 DIHQVNADKIGISRKLVKTVTYAFLYGAGD---EKIGHSYDKPLSSQAAKKKGKEI 109
>gi|262212111|gb|ACY35672.1| DNA polymerase [Uncultured T7-like podovirus]
gi|262342243|gb|ACY54632.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 192
Score = 40.8 bits (94), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
Query: 609 DMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKM 664
D+H + A +GISR+ K + YA +YGAG+ E++ ++ +S AK K +++
Sbjct: 57 DIHQVNADKIGISRKLVKTVTYAFLYGAGD---EKIGHSYDKPLSSQAAKKKGKEI 109
>gi|394775232|gb|AFN37694.1| gp39 [Mycobacteriophage ElTiger69]
Length = 632
Score = 40.8 bits (94), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 42/88 (47%), Gaps = 15/88 (17%)
Query: 553 LRAMIQAPDGYSIIGADVDSQELWI-ASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMH 611
+R A G+ + D +QEL + A++ GD T+ +N+ D+H
Sbjct: 391 VRRCFLADSGHLMASVDYQTQELRVLAALSGDP--------------TMLAAFANSEDLH 436
Query: 612 SITAKAVGISREHAKIINYARIYGAGER 639
ITA A G+ R+ K+ N+ +YG G +
Sbjct: 437 QITADAAGVDRKVGKMANFLTVYGGGPK 464
>gi|262212221|gb|ACY35727.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 192
Score = 40.8 bits (94), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
Query: 609 DMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKM 664
D+H + A VGISR+ K + YA +YGAG+ E++ ++ +S AK K +++
Sbjct: 57 DIHQVNADKVGISRKLVKTVTYAFLYGAGD---EKIGHSYDKLLSSQAAKKKGKEI 109
>gi|339753454|gb|AEJ93478.1| gp39 [Mycobacterium phage Benedict]
Length = 621
Score = 40.8 bits (94), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 42/88 (47%), Gaps = 15/88 (17%)
Query: 553 LRAMIQAPDGYSIIGADVDSQELWI-ASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMH 611
+R A G+ + D +QEL + A++ GD T+ +N+ D+H
Sbjct: 380 VRRCFLADSGHLMASVDYQTQELRVLAALSGDP--------------TMLAAFANSEDLH 425
Query: 612 SITAKAVGISREHAKIINYARIYGAGER 639
ITA A G+ R+ K+ N+ +YG G +
Sbjct: 426 QITADAAGVDRKVGKMANFLTVYGGGPK 453
>gi|229472407|gb|ACQ72718.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 192
Score = 40.8 bits (94), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 54/114 (47%), Gaps = 14/114 (12%)
Query: 551 SELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDM 610
S R + G ++GAD+ EL + S Y + + L+G D+
Sbjct: 10 SRFRELFIPTPGQIMVGADLAGIELRMLSHFLARYDNGRYAD-----ILLNG------DI 58
Query: 611 HSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKM 664
H + A +GISR+ K + YA +YGAG+ E++ ++ +S AK K +++
Sbjct: 59 HQVNADKIGISRKLVKTVTYAFLYGAGD---EKIGHSYDKLLSSQAAKKKGKEI 109
>gi|229472197|gb|ACQ72613.1| DNA polymerase [Uncultured T7-like podovirus]
gi|229472287|gb|ACQ72658.1| DNA polymerase [Uncultured T7-like podovirus]
gi|229472311|gb|ACQ72670.1| DNA polymerase [Uncultured T7-like podovirus]
gi|229472417|gb|ACQ72723.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 192
Score = 40.8 bits (94), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 54/114 (47%), Gaps = 14/114 (12%)
Query: 551 SELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDM 610
S R + G ++GAD+ EL + S Y + + L+G D+
Sbjct: 10 SRFRELFIPTPGQIMVGADLAGIELRMLSHFLARYDNGRYAD-----ILLNG------DI 58
Query: 611 HSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKM 664
H + A +GISR+ K + YA +YGAG+ E++ ++ +S AK K +++
Sbjct: 59 HQVNADKIGISRKLVKTVTYAFLYGAGD---EKIGHSYDKLLSSQAAKKKGKEI 109
>gi|262212135|gb|ACY35684.1| DNA polymerase [Uncultured T7-like podovirus]
gi|262342221|gb|ACY54621.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 192
Score = 40.8 bits (94), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
Query: 609 DMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKM 664
D+H + A +GISR+ K + YA +YGAG+ E++ ++ +S AK K +++
Sbjct: 57 DIHQVNADKIGISRKLVKTVTYAFLYGAGD---EKIGHSYDKLLSSQAAKKKGKEI 109
>gi|262212061|gb|ACY35647.1| DNA polymerase [Uncultured T7-like podovirus]
gi|262212137|gb|ACY35685.1| DNA polymerase [Uncultured T7-like podovirus]
gi|262212159|gb|ACY35696.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 192
Score = 40.4 bits (93), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 35/56 (62%), Gaps = 3/56 (5%)
Query: 609 DMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKM 664
D+H + A +GISR+ K + YA +YGAG+ E++ ++ +S + AK + +++
Sbjct: 57 DIHQVNADKIGISRKLVKTVTYAFLYGAGD---EKIGHSYDKLLSSAKAKKRGKEI 109
>gi|262212227|gb|ACY35730.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 192
Score = 40.4 bits (93), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 35/56 (62%), Gaps = 3/56 (5%)
Query: 609 DMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKM 664
D+H + A +GISR+ K + YA +YGAG+ E++ ++ +S + AK + +++
Sbjct: 57 DIHQVNADKIGISRKLVKTVTYAFLYGAGD---EKIGHSYDKLLSSAKAKKRGKEI 109
>gi|325272840|ref|ZP_08139177.1| DNA polymerase [Pseudomonas sp. TJI-51]
gi|324102045|gb|EGB99554.1| DNA polymerase [Pseudomonas sp. TJI-51]
Length = 683
Score = 40.4 bits (93), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 63/145 (43%), Gaps = 30/145 (20%)
Query: 509 IESEGRDYGVILPQLIVSGTLTRRAVEATWMTAS-NAVGERVGSELRAMIQAPDGYSIIG 567
+E +GR +G + P +G T RA A A A G G + R + P G+ ++G
Sbjct: 369 VEKQGRIHGSVNP----NGAATGRATHAYPNVAQVPASGSPYGIDCRELFTVPHGWLLVG 424
Query: 568 ADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMHSITAKAVGIS------ 621
AD EL + + A+ G + + L+G D+H +A+GI+
Sbjct: 425 ADASGLELRCLA----HFMARYDGGKYVD-ILLNG------DIHWANVQAMGITSEKRDD 473
Query: 622 --------REHAKIINYARIYGAGE 638
R+ AK YA +YGAG+
Sbjct: 474 HNTLHKLYRDGAKTFIYAFLYGAGD 498
>gi|262342259|gb|ACY54640.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 187
Score = 40.4 bits (93), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
Query: 609 DMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKM 664
D+H + A +GISR+ K + YA +YGAG+ E++ ++ +S AK K +++
Sbjct: 57 DIHQVNADKIGISRKLVKTVTYAFLYGAGD---EKIGHSYDKLLSSQAAKKKGKEI 109
>gi|262212131|gb|ACY35682.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 192
Score = 40.4 bits (93), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 33/56 (58%), Gaps = 3/56 (5%)
Query: 609 DMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKM 664
D+H + A +GISR+ K + YA +YGAG+ E++ + +S AK K +++
Sbjct: 57 DIHQVNADKIGISRKLVKTVTYAFLYGAGD---EKIGHSYGKPLSSQAAKKKGKEI 109
>gi|262212231|gb|ACY35732.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 192
Score = 40.4 bits (93), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 52/107 (48%), Gaps = 22/107 (20%)
Query: 562 GYSIIGADVDSQELWIASVIGDSY----CAKEHGATPLGWMTLSGQKSNATDMHSITAKA 617
G ++GAD+ EL + S Y CA + L+G D+H + A
Sbjct: 21 GQVMVGADLAGIELRMLSHFLARYDNGRCAD---------ILLNG------DIHQVNADK 65
Query: 618 VGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKM 664
+GISR+ K + YA +YGAG+ E++ ++ +S AK K +++
Sbjct: 66 IGISRKLVKTVTYAFLYGAGD---EKIGHSYDKLLSSQAAKKKGKEI 109
>gi|262342285|gb|ACY54653.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 192
Score = 40.4 bits (93), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
Query: 609 DMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKM 664
D+H + A +GISR+ K + YA +YGAG+ E++ ++ +S AK K +++
Sbjct: 57 DIHQVNADKIGISRKLVKTVTYAFLYGAGD---EKIGHSYDKLLSSQAAKKKGKEI 109
>gi|262212165|gb|ACY35699.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 192
Score = 40.4 bits (93), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
Query: 609 DMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKM 664
D+H + A +GISR+ K + YA +YGAG+ E++ ++ +S AK K +++
Sbjct: 57 DIHQVNADKIGISRKLVKTVTYAFLYGAGD---EKIGHSYDKLLSSQAAKKKGKEI 109
>gi|229472505|gb|ACQ72767.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 192
Score = 40.4 bits (93), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
Query: 609 DMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKM 664
D+H + A +GISR+ K + YA +YGAG+ E++ ++ +S AK K +++
Sbjct: 57 DIHQVNADKIGISRKLVKTVTYAFLYGAGD---EKIGHSYDKLLSSQAAKKKGKEI 109
>gi|262212219|gb|ACY35726.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 192
Score = 40.4 bits (93), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
Query: 609 DMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKM 664
D+H + A +GISR+ K + YA +YGAG+ E++ ++ +S AK K +++
Sbjct: 57 DIHQVNADKIGISRKLVKTVTYAFLYGAGD---EKIGHSYDKLLSSQAAKKKGKEI 109
>gi|262212153|gb|ACY35693.1| DNA polymerase [Uncultured T7-like podovirus]
gi|262212177|gb|ACY35705.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 192
Score = 40.4 bits (93), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
Query: 609 DMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKM 664
D+H + A +GISR+ K + YA +YGAG+ E++ ++ +S AK K +++
Sbjct: 57 DIHQVNADKIGISRKLVKTVTYAFLYGAGD---EKIGHSYDKLLSSQAAKKKGKEI 109
>gi|332188178|ref|ZP_08389907.1| DNA polymerase I family protein [Sphingomonas sp. S17]
gi|332011785|gb|EGI53861.1| DNA polymerase I family protein [Sphingomonas sp. S17]
Length = 921
Score = 40.4 bits (93), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 44/92 (47%), Gaps = 18/92 (19%)
Query: 549 VGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNAT 608
VG +LR A DG+ +I AD EL +A+ + D ++ A N
Sbjct: 677 VGRQLREAFIAEDGHVLIAADYSQIELRLAAHMADVPALRDAFA-------------NGD 723
Query: 609 DMHSITAKAV-----GISREHAKIINYARIYG 635
D+HS+TAK + +R AK IN+A +YG
Sbjct: 724 DIHSLTAKELFGEVNRDTRGRAKTINFAILYG 755
>gi|262342273|gb|ACY54647.1| DNA polymerase [Uncultured T7-like podovirus]
gi|262342305|gb|ACY54663.1| DNA polymerase [Uncultured T7-like podovirus]
gi|262342315|gb|ACY54668.1| DNA polymerase [Uncultured T7-like podovirus]
gi|262342327|gb|ACY54674.1| DNA polymerase [Uncultured T7-like podovirus]
gi|262342329|gb|ACY54675.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 192
Score = 40.4 bits (93), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
Query: 609 DMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKM 664
D+H + A +GISR+ K + YA +YGAG+ E++ ++ +S AK K +++
Sbjct: 57 DIHQVNADKIGISRKLVKTVTYAFLYGAGD---EKIGHSYDKLLSSQAAKKKGKEI 109
>gi|229472403|gb|ACQ72716.1| DNA polymerase [Uncultured T7-like podovirus]
gi|229472503|gb|ACQ72766.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 192
Score = 40.4 bits (93), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
Query: 609 DMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKM 664
D+H + A +GISR+ K + YA +YGAG+ E++ ++ +S AK K +++
Sbjct: 57 DIHQVNADKIGISRKLVKTVTYAFLYGAGD---EKIGHSYDKLLSSPKAKKKGKEI 109
>gi|229472263|gb|ACQ72646.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 192
Score = 40.4 bits (93), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
Query: 609 DMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKM 664
D+H + A +GISR+ K + YA +YGAG+ E++ ++ +S + AK K ++
Sbjct: 57 DIHQVNADKIGISRKLVKTVTYAFLYGAGD---EKIGHSYDKLLSSAKAKKKGEEI 109
>gi|296392358|ref|ZP_06881833.1| DNA polymerase I [Pseudomonas aeruginosa PAb1]
gi|355650828|ref|ZP_09056294.1| DNA polymerase I [Pseudomonas sp. 2_1_26]
gi|354826582|gb|EHF10793.1| DNA polymerase I [Pseudomonas sp. 2_1_26]
Length = 913
Score = 40.4 bits (93), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 98/258 (37%), Gaps = 66/258 (25%)
Query: 550 GSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATD 609
G +R AP GY ++ AD EL I ++ AK+ G L ++ A +
Sbjct: 671 GRRIRQAFVAPQGYKLLAADYSQIELRIM-----AHLAKDDGLLDAFRHDLDVHRATAAE 725
Query: 610 MHSITAKAV-GISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLT 668
+ + + V G R AK IN+ IYG A L KQ E ++ A
Sbjct: 726 VFGVPLEDVSGDQRRSAKAINFGLIYGMS---AFGLAKQIGVERKEAQA----------- 771
Query: 669 KGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQWYGGTESAMFNR--- 725
I R +++Y AY +++ + G E+ +F R
Sbjct: 772 ---------------YIDRYFARYPG---VLAY---MERTRAQAAEQGFVET-LFGRRLY 809
Query: 726 LEEIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLVCM-RW 784
L EI + N + +A E +T IN +Q A D + +V + W
Sbjct: 810 LPEIHSK--------NGAMRKAAE----------RTAINAPMQGTAADIMKRAMVAVDNW 851
Query: 785 LVSR--DTRFVISIHDEI 800
L+ D R ++ +HDE+
Sbjct: 852 LLESGLDARVILQVHDEL 869
>gi|262212333|gb|ACY35783.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 192
Score = 40.4 bits (93), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
Query: 609 DMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKM 664
D+H + A +GISR+ K + YA +YGAG+ E++ ++ +S AK K +++
Sbjct: 57 DIHQVNADKIGISRKLVKTVTYAFLYGAGD---EKIGHSYDKLLSSQAAKKKGKEI 109
>gi|262212157|gb|ACY35695.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 192
Score = 40.4 bits (93), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
Query: 609 DMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKM 664
D+H + A +GISR+ K + YA +YGAG+ E++ ++ +S AK K +++
Sbjct: 57 DIHQVNADKIGISRKLVKTVTYAFLYGAGD---EKIGHSYDKLLSSQAAKKKGKEV 109
>gi|262212053|gb|ACY35643.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 192
Score = 40.4 bits (93), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
Query: 609 DMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKM 664
D+H + A +GISR+ K + YA +YGAG+ E++ ++ +S AK K +++
Sbjct: 57 DIHQVNADKIGISRKLVKTVTYAFLYGAGD---EKIGHSYDKLLSSQAAKKKGKEI 109
>gi|416877922|ref|ZP_11920061.1| DNA polymerase I [Pseudomonas aeruginosa 152504]
gi|334839046|gb|EGM17744.1| DNA polymerase I [Pseudomonas aeruginosa 152504]
Length = 913
Score = 40.4 bits (93), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 98/258 (37%), Gaps = 66/258 (25%)
Query: 550 GSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATD 609
G +R AP GY ++ AD EL I ++ AK+ G L ++ A +
Sbjct: 671 GRRIRQAFVAPQGYKLLAADYSQIELRIM-----AHLAKDDGLLDAFRHDLDVHRATAAE 725
Query: 610 MHSITAKAV-GISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLT 668
+ + + V G R AK IN+ IYG A L KQ E ++ A
Sbjct: 726 VFGVPLEDVSGDQRRSAKAINFGLIYGMS---AFGLAKQIGVERKEAQA----------- 771
Query: 669 KGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQWYGGTESAMFNR--- 725
I R +++Y AY +++ + G E+ +F R
Sbjct: 772 ---------------YIDRYFARYPG---VLAY---MERTRAQAAEQGFVET-LFGRRLY 809
Query: 726 LEEIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLVCM-RW 784
L EI + N + +A E +T IN +Q A D + +V + W
Sbjct: 810 LPEIHSK--------NGAMRKAAE----------RTAINAPMQGTAADIMKRAMVAVDNW 851
Query: 785 LVSR--DTRFVISIHDEI 800
L+ D R ++ +HDE+
Sbjct: 852 LLESGLDARVILQVHDEL 869
>gi|262342261|gb|ACY54641.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 191
Score = 40.4 bits (93), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
Query: 609 DMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKM 664
D+H + A +GISR+ K + YA +YGAG+ E++ ++ +S AK K +++
Sbjct: 56 DIHQVNADKIGISRKLVKTVTYAFLYGAGD---EKIGHSYDKLLSSQAAKKKGKEI 108
>gi|262342207|gb|ACY54614.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 192
Score = 40.4 bits (93), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
Query: 609 DMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKM 664
D+H + A +GISR+ K + YA +YGAG+ E++ ++ +S AK K +++
Sbjct: 57 DIHQVNADKIGISRKLVKTVTYAFLYGAGD---EKIGHSYDKLLSSQAAKKKGKEI 109
>gi|262212213|gb|ACY35723.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 191
Score = 40.4 bits (93), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
Query: 609 DMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKM 664
D+H + A +GISR+ K + YA +YGAG+ E++ ++ +S AK K +++
Sbjct: 56 DIHQVNADKIGISRKLVKTVTYAFLYGAGD---EKIGHSYDKLLSSQAAKKKGKEI 108
>gi|26988997|ref|NP_744422.1| DNA polymerase [Pseudomonas putida KT2440]
gi|24983817|gb|AAN67886.1|AE016420_8 DNA polymerase [Pseudomonas putida KT2440]
Length = 695
Score = 40.4 bits (93), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 63/145 (43%), Gaps = 30/145 (20%)
Query: 509 IESEGRDYGVILPQLIVSGTLTRRAVEATWMTAS-NAVGERVGSELRAMIQAPDGYSIIG 567
+E +GR +G + P +G T RA A A A G G + R + P G+ ++G
Sbjct: 381 VEKQGRIHGSVNP----NGAATGRATHAYPNVAQVPASGSPYGKDCRELFTVPLGWLLVG 436
Query: 568 ADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMHSITAKAVGIS------ 621
AD EL + + A+ G + + L+G D+H +A+GI+
Sbjct: 437 ADASGLELRCLA----HFMARYDGGKYVD-ILLNG------DIHWANVQAMGITSEKRDD 485
Query: 622 --------REHAKIINYARIYGAGE 638
R+ AK YA +YGAG+
Sbjct: 486 HNTLHKLYRDGAKTFIYAFLYGAGD 510
>gi|262212189|gb|ACY35711.1| DNA polymerase [Uncultured T7-like podovirus]
gi|262342241|gb|ACY54631.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 192
Score = 40.4 bits (93), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
Query: 609 DMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKM 664
D+H + A +GISR+ K + YA +YGAG+ E++ ++ +S AK K +++
Sbjct: 57 DIHQVNADKIGISRKLVKTVTYAFLYGAGD---EKIGHSYDKLLSSQAAKKKGKEI 109
>gi|262342251|gb|ACY54636.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 192
Score = 40.4 bits (93), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
Query: 609 DMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKM 664
D+H + A +GISR+ K + YA +YGAG+ E++ ++ +S AK K +++
Sbjct: 57 DIHQVNADKIGISRKLVKTVTYAFLYGAGD---EKIGHSYDKLLSSQAAKKKGKEI 109
>gi|262212217|gb|ACY35725.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 192
Score = 40.4 bits (93), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
Query: 609 DMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKM 664
D+H + A +GISR+ K + YA +YGAG+ E++ ++ +S AK K +++
Sbjct: 57 DIHQVNADKIGISRKLVKTVTYAFLYGAGD---EKIGHSYDKLLSSQAAKKKGKEI 109
>gi|229472281|gb|ACQ72655.1| DNA polymerase [Uncultured T7-like podovirus]
gi|262212143|gb|ACY35688.1| DNA polymerase [Uncultured T7-like podovirus]
gi|262212169|gb|ACY35701.1| DNA polymerase [Uncultured T7-like podovirus]
gi|262212175|gb|ACY35704.1| DNA polymerase [Uncultured T7-like podovirus]
gi|262212179|gb|ACY35706.1| DNA polymerase [Uncultured T7-like podovirus]
gi|262212233|gb|ACY35733.1| DNA polymerase [Uncultured T7-like podovirus]
gi|262212337|gb|ACY35785.1| DNA polymerase [Uncultured T7-like podovirus]
gi|262342211|gb|ACY54616.1| DNA polymerase [Uncultured T7-like podovirus]
gi|262342215|gb|ACY54618.1| DNA polymerase [Uncultured T7-like podovirus]
gi|262342217|gb|ACY54619.1| DNA polymerase [Uncultured T7-like podovirus]
gi|262342223|gb|ACY54622.1| DNA polymerase [Uncultured T7-like podovirus]
gi|262342231|gb|ACY54626.1| DNA polymerase [Uncultured T7-like podovirus]
gi|262342253|gb|ACY54637.1| DNA polymerase [Uncultured T7-like podovirus]
gi|262342255|gb|ACY54638.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 192
Score = 40.4 bits (93), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
Query: 609 DMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKM 664
D+H + A +GISR+ K + YA +YGAG+ E++ ++ +S AK K +++
Sbjct: 57 DIHQVNADKIGISRKLVKTVTYAFLYGAGD---EKIGHSYDKLLSSQAAKKKGKEI 109
>gi|262342225|gb|ACY54623.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 192
Score = 40.4 bits (93), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
Query: 609 DMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKM 664
D+H + A +GISR+ K + YA +YGAG+ E++ ++ +S AK K +++
Sbjct: 57 DIHQVNADKIGISRKLVKTVTYAFLYGAGD---EKIGHSYDKLLSSQAAKKKGKEI 109
>gi|262212093|gb|ACY35663.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 192
Score = 40.4 bits (93), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
Query: 609 DMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKM 664
D+H + A +GISRE K + YA +YGAG+ E++ ++ +S A+ K +++
Sbjct: 57 DIHQVNADKIGISRELVKTVTYAFLYGAGD---EKIGHSYDKLLSSKAAEKKGKEI 109
>gi|262212075|gb|ACY35654.1| DNA polymerase [Uncultured T7-like podovirus]
gi|262212091|gb|ACY35662.1| DNA polymerase [Uncultured T7-like podovirus]
gi|262212181|gb|ACY35707.1| DNA polymerase [Uncultured T7-like podovirus]
gi|262342239|gb|ACY54630.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 192
Score = 40.4 bits (93), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
Query: 609 DMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKM 664
D+H + A +GISRE K + YA +YGAG+ E++ ++ +S A+ K +++
Sbjct: 57 DIHQVNADKIGISRELVKTVTYAFLYGAGD---EKIGHSYDKLLSSKAAEKKGKEI 109
>gi|229472305|gb|ACQ72667.1| DNA polymerase [Uncultured T7-like podovirus]
gi|229472551|gb|ACQ72790.1| DNA polymerase [Uncultured T7-like podovirus]
gi|262212067|gb|ACY35650.1| DNA polymerase [Uncultured T7-like podovirus]
gi|262212073|gb|ACY35653.1| DNA polymerase [Uncultured T7-like podovirus]
gi|262212087|gb|ACY35660.1| DNA polymerase [Uncultured T7-like podovirus]
gi|262212103|gb|ACY35668.1| DNA polymerase [Uncultured T7-like podovirus]
gi|262212107|gb|ACY35670.1| DNA polymerase [Uncultured T7-like podovirus]
gi|262212117|gb|ACY35675.1| DNA polymerase [Uncultured T7-like podovirus]
gi|262212149|gb|ACY35691.1| DNA polymerase [Uncultured T7-like podovirus]
gi|262212151|gb|ACY35692.1| DNA polymerase [Uncultured T7-like podovirus]
gi|262212163|gb|ACY35698.1| DNA polymerase [Uncultured T7-like podovirus]
gi|262212185|gb|ACY35709.1| DNA polymerase [Uncultured T7-like podovirus]
gi|262212199|gb|ACY35716.1| DNA polymerase [Uncultured T7-like podovirus]
gi|262342209|gb|ACY54615.1| DNA polymerase [Uncultured T7-like podovirus]
gi|262342219|gb|ACY54620.1| DNA polymerase [Uncultured T7-like podovirus]
gi|262342245|gb|ACY54633.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 192
Score = 40.4 bits (93), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
Query: 609 DMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKM 664
D+H + A +GISR+ K + YA +YGAG+ E++ ++ +S AK K +++
Sbjct: 57 DIHQVNADKIGISRKLVKTVTYAFLYGAGD---EKIGHSYDKLLSSQAAKKKGKEI 109
>gi|262212059|gb|ACY35646.1| DNA polymerase [Uncultured T7-like podovirus]
gi|262212071|gb|ACY35652.1| DNA polymerase [Uncultured T7-like podovirus]
gi|262212081|gb|ACY35657.1| DNA polymerase [Uncultured T7-like podovirus]
gi|262212101|gb|ACY35667.1| DNA polymerase [Uncultured T7-like podovirus]
gi|262212145|gb|ACY35689.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 192
Score = 40.4 bits (93), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
Query: 609 DMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKM 664
D+H + A +GISRE K + YA +YGAG+ E++ ++ +S A+ K +++
Sbjct: 57 DIHQVNADKIGISRELVKTVTYAFLYGAGD---EKIGHSYDKLLSSKAAEKKGKEI 109
>gi|262342257|gb|ACY54639.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 192
Score = 40.4 bits (93), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
Query: 609 DMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKM 664
D+H + A +GISR+ K + YA +YGAG+ E++ ++ +S AK K +++
Sbjct: 57 DIHQVNADKIGISRKLVKTVTYAFLYGAGD---EKIGHSYDKLLSSQAAKKKGKEI 109
>gi|262212193|gb|ACY35713.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 185
Score = 40.4 bits (93), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
Query: 609 DMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKM 664
D+H + A +GISR+ K + YA +YGAG+ E++ ++ +S AK K +++
Sbjct: 50 DIHQVNADKIGISRKLVKTVTYAFLYGAGD---EKIGHSYDKLLSSQAAKKKGKEI 102
>gi|262212155|gb|ACY35694.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 192
Score = 40.4 bits (93), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
Query: 609 DMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKM 664
D+H + A +GISR+ K + YA +YGAG+ E++ ++ +S AK K +++
Sbjct: 57 DIHQVNADKIGISRKLVKTVTYAFLYGAGD---EKIGHSYDKLLSSQAAKKKGKEI 109
>gi|262212125|gb|ACY35679.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 192
Score = 40.4 bits (93), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
Query: 609 DMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKM 664
D+H + A +GISR+ K + YA +YGAG+ E++ ++ +S AK K +++
Sbjct: 57 DIHQVNADKIGISRKLVKTVTYAFLYGAGD---EKIGHSYDKLLSSQAAKKKGKEI 109
>gi|262212079|gb|ACY35656.1| DNA polymerase [Uncultured T7-like podovirus]
gi|262212083|gb|ACY35658.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 192
Score = 40.4 bits (93), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
Query: 609 DMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKM 664
D+H + A +GISR+ K + YA +YGAG+ E++ ++ +S AK K +++
Sbjct: 57 DIHQVNADKIGISRKLVKTVTYAFLYGAGD---EKIGHSYDKLLSSQAAKKKGKEI 109
>gi|262212139|gb|ACY35686.1| DNA polymerase [Uncultured T7-like podovirus]
gi|262212161|gb|ACY35697.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 192
Score = 40.4 bits (93), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
Query: 609 DMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKM 664
D+H + A +GISR+ K + YA +YGAG+ E++ ++ +S AK K +++
Sbjct: 57 DIHQVNADKIGISRKLVKTVTYAFLYGAGD---EKIGHSYDKLLSSQAAKKKGKEI 109
>gi|262342229|gb|ACY54625.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 191
Score = 40.4 bits (93), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
Query: 609 DMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKM 664
D+H + A +GISR+ K + YA +YGAG+ E++ ++ +S AK K +++
Sbjct: 57 DIHQVNADKIGISRKLVKTVTYAFLYGAGD---EKIGHSYDKLLSSQAAKKKGKEI 109
>gi|262212207|gb|ACY35720.1| DNA polymerase [Uncultured T7-like podovirus]
gi|262342263|gb|ACY54642.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 192
Score = 40.4 bits (93), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
Query: 609 DMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKM 664
D+H + A +GISR+ K + YA +YGAG+ E++ ++ +S AK K +++
Sbjct: 57 DIHQVNADKIGISRKLVKTVTYAFLYGAGD---EKIGHSYDKLLSSQAAKKKGKEV 109
>gi|262212069|gb|ACY35651.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 191
Score = 40.4 bits (93), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
Query: 609 DMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKM 664
D+H + A +GISRE K + YA +YGAG+ E++ ++ +S A+ K +++
Sbjct: 57 DIHQVNADKIGISRELVKTVTYAFLYGAGD---EKIGHSYDKLLSSKAAEKKGKEI 109
>gi|262212133|gb|ACY35683.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 192
Score = 40.0 bits (92), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
Query: 609 DMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKM 664
D+H + A +GISR+ K + YA +YGAG+ E++ ++ +S AK K +++
Sbjct: 57 DIHQVNADKIGISRKLVKTVTYAFLYGAGD---EKIGHSYDKLLSSQAAKKKGKEV 109
>gi|262212055|gb|ACY35644.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 192
Score = 40.0 bits (92), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
Query: 609 DMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKM 664
D+H + A +GISRE K + YA +YGAG+ E++ ++ +S A+ K +++
Sbjct: 57 DIHQVNADKIGISRELVKTVTYAFLYGAGD---EKIGHSYDKLLSSKAAEKKGKEI 109
>gi|229472539|gb|ACQ72784.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 192
Score = 40.0 bits (92), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
Query: 609 DMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKM 664
D+H + A +GISR+ K + YA +YGAG+ E++ ++ +S AK K +++
Sbjct: 57 DIHQVNADKIGISRKLVKTVTYAFLYGAGD---EKIGHSYDKLLSSKAAKEKGKEI 109
>gi|262212389|gb|ACY35811.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 192
Score = 40.0 bits (92), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
Query: 609 DMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKM 664
D+H + A +GISR+ K + YA +YGAG+ E++ ++ +S AK K +++
Sbjct: 57 DIHQVNADKIGISRKLVKTVTYAFLYGAGD---EKIGHSYDKLLSSQAAKKKGKEI 109
>gi|262212113|gb|ACY35673.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 192
Score = 40.0 bits (92), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
Query: 609 DMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKM 664
D+H + A +GISR+ K + YA +YGAG+ E++ ++ +S AK K +++
Sbjct: 57 DIHQVNADKIGISRKLVKTVTYAFLYGAGD---EKIGHSYDKLLSSQAAKKKGKEV 109
>gi|407984359|ref|ZP_11164978.1| 3'-5' exonuclease family protein [Mycobacterium hassiacum DSM
44199]
gi|407374053|gb|EKF23050.1| 3'-5' exonuclease family protein [Mycobacterium hassiacum DSM
44199]
Length = 595
Score = 40.0 bits (92), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 23/35 (65%)
Query: 605 SNATDMHSITAKAVGISREHAKIINYARIYGAGER 639
+N D+H +TA A G+ R+ KI N+ ++YG G +
Sbjct: 414 ANGADLHQMTADAAGVPRKVGKIANFQKVYGGGPK 448
>gi|262342213|gb|ACY54617.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 192
Score = 40.0 bits (92), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
Query: 609 DMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKM 664
D+H + A +GISR+ K + YA +YGAG+ E++ ++ +S AK K +++
Sbjct: 57 DIHQVNADKIGISRKLVKAVTYAFLYGAGD---EKIGHSYDKLLSSQAAKKKGKEI 109
>gi|262342205|gb|ACY54613.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 192
Score = 40.0 bits (92), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
Query: 609 DMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKM 664
D+H + A +GISR+ K + YA +YGAG+ E++ ++ +S AK K +++
Sbjct: 57 DIHQVNADKIGISRKLVKTVTYAFLYGAGD---EKIGHGYDKLLSSQAAKKKGKEI 109
>gi|262212187|gb|ACY35710.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 192
Score = 40.0 bits (92), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
Query: 609 DMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKM 664
D+H + A +GISR+ K + YA +YGAG+ E++ ++ +S AK K +++
Sbjct: 57 DIHQVNADKIGISRKLVKAVTYAFLYGAGD---EKIGHSYDKLLSSQAAKKKGKEI 109
>gi|337732509|gb|AEI71776.1| DNA polymerase [Prochlorococcus phage P-TIP38]
Length = 166
Score = 40.0 bits (92), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 52/113 (46%), Gaps = 14/113 (12%)
Query: 552 ELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMH 611
E R + A ++++GAD+ EL + + Y + G + D+H
Sbjct: 4 EFRELFTASPRHTMVGADLSGIELRMLA----HYLGRFDGGRYADILL-------NDDIH 52
Query: 612 SITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKM 664
+ A +GI+R K + YA +YGAG E+L ++ + +A+ K +++
Sbjct: 53 QVNADKIGITRRQVKTVTYAFLYGAGN---EKLGMSYDNTLQPKEARKKGQEI 102
>gi|229472279|gb|ACQ72654.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 192
Score = 40.0 bits (92), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
Query: 609 DMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKM 664
D+H + A +GISR+ K + YA +YGAG+ E++ ++ +S AK K +++
Sbjct: 57 DIHQVNADKIGISRKLVKTVTYAFLYGAGD---EKIGHSYDKLLSSRAAKKKGKEI 109
>gi|262212223|gb|ACY35728.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 192
Score = 40.0 bits (92), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
Query: 609 DMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKM 664
D+H + A +GISR+ AK + YA +YGAG+ E++ + +S AK K +++
Sbjct: 57 DIHQVNADKIGISRKLAKTVTYAFLYGAGD---EKIGHSCDKLLSSQAAKKKGKEI 109
>gi|336020899|gb|ABQ12452.2| DNA polymerase [Phormidium phage Pf-WMP3]
Length = 622
Score = 40.0 bits (92), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 40/88 (45%), Gaps = 9/88 (10%)
Query: 550 GSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATD 609
G ELR++ AP G+S++ D +L I + + Y + LS + D
Sbjct: 375 GKELRSLFSAPPGWSLVVGDQSGFQLRIMAAYMEMYYDEPR---------LSKVFVDGED 425
Query: 610 MHSITAKAVGISREHAKIINYARIYGAG 637
+H A GI R+ AK + + +GAG
Sbjct: 426 VHQFFADIYGIDRKIAKNVTFGYAFGAG 453
>gi|372449763|ref|YP_005086989.1| unnamed protein product [Rhodococcus phage RGL3]
gi|359472222|gb|AEV52111.1| DNA polymerase I [Rhodococcus phage RGL3]
Length = 598
Score = 39.7 bits (91), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 76/190 (40%), Gaps = 40/190 (21%)
Query: 503 RRLVENIESEGRDYGVILPQLIVSGTLTRRAVEATWMTASNAVGERVGSELRAMIQAPDG 562
R ++ +S R + I P +G ++ + A + + + + +R A +G
Sbjct: 335 RAFLDKRDSNDRCHAAINPLRARTGRMSITGIPAQTLPSGDWM-------IRRCFVADEG 387
Query: 563 YSIIGADVDSQELWI-ASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMHSITAKAVGIS 621
+ I D +QEL + A++ GD + + D+H ITA A G+
Sbjct: 388 HRIASIDYQTQELRVLAALSGDQVMVEAF--------------AEEKDLHQITADAAGVG 433
Query: 622 REHAKIINYARIYGAGERF-----------AERLLKQFNPEMSKSDAKSK------ARKM 664
R+ K+ N+ +YG G A+ +LK F K A S+ AR
Sbjct: 434 RKIGKMANFLTVYGGGPGALAEQAGIDLGTAKHVLKAFGQAYPKVGAFSRKLQSQAARNG 493
Query: 665 YTLT-KGKKL 673
Y T G++L
Sbjct: 494 YITTPSGRRL 503
>gi|192824042|ref|YP_001994504.1| gp46 [Mycobacterium phage KBG]
gi|190610272|gb|ACE79794.1| gp46 [Mycobacterium phage KBG]
Length = 608
Score = 39.7 bits (91), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 62/139 (44%), Gaps = 31/139 (22%)
Query: 553 LRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMHS 612
+R A G ++ D +QEL + + + + + K NA D+H
Sbjct: 375 VRRCFLADSGQLMVSVDYQAQELRVLAALANDRT------------MIQAFKDNA-DLHQ 421
Query: 613 ITAKAVGISREHAKIINYARIYGAGERF-----------AERLLKQFN---PE---MSKS 655
ITA A G+ R+ K++N+A ++G+G A+R++ F PE +SKS
Sbjct: 422 ITADASGVDRKVGKMVNFAYVFGSGPSTIAAQAGITFPEAKRVIAGFEQSYPEVTALSKS 481
Query: 656 DAKSKARKMYTLT-KGKKL 673
+ A Y +T G++L
Sbjct: 482 LQREAANLGYVITPTGRRL 500
>gi|288817697|ref|YP_003432044.1| DNA polymerase I [Hydrogenobacter thermophilus TK-6]
gi|384128458|ref|YP_005511071.1| DNA-directed DNA polymerase [Hydrogenobacter thermophilus TK-6]
gi|288787096|dbj|BAI68843.1| DNA polymerase I [Hydrogenobacter thermophilus TK-6]
gi|308751295|gb|ADO44778.1| DNA-directed DNA polymerase [Hydrogenobacter thermophilus TK-6]
Length = 576
Score = 39.7 bits (91), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 79/185 (42%), Gaps = 33/185 (17%)
Query: 484 NHERVKKQFVVWLNKKDLPRRLVENIESEGRDYGVILPQLIVSGTLTRRAVEATWMTASN 543
+H+ V+ + + KK L + ++ I S +D G + P+ G +T R M++ N
Sbjct: 279 HHKPVQMILEIRMTKKLLDK--LDEIRSFVKD-GSVYPEFKQIGAITGR------MSSLN 329
Query: 544 AVGERVGSELRAMIQAPDGYSIIGADVDSQELWIAS-VIGDSYCAKEHGATPLGWMTLSG 602
+ + +LR + +A +G ++ +D EL IAS +GD K
Sbjct: 330 PNVQNIPRDLRGVFKAREGKVLVISDFSQIELRIASEYVGDERMIKAF------------ 377
Query: 603 QKSNATDMHSITA------KAVGISREH---AKIINYARIYGAGERFAERLLKQFNPEMS 653
D+H TA K IS+E AK +N+ IYG R K + ++S
Sbjct: 378 --REGKDLHRYTASVLLGKKEEDISKEERQLAKAVNFGLIYGISARGLSDYAKSYGIDLS 435
Query: 654 KSDAK 658
DA+
Sbjct: 436 VDDAQ 440
>gi|339753627|gb|AEJ93649.1| gp45 [Mycobacterium phage Doom]
Length = 608
Score = 39.7 bits (91), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 62/139 (44%), Gaps = 31/139 (22%)
Query: 553 LRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMHS 612
+R A G ++ D +QEL + + + + + K NA D+H
Sbjct: 375 VRRCFLADSGQLMVSVDYQAQELRVLAALANDRT------------MIQAFKDNA-DLHQ 421
Query: 613 ITAKAVGISREHAKIINYARIYGAGERF-----------AERLLKQFN---PE---MSKS 655
ITA A G+ R+ K++N+A ++G+G A+R++ F PE +SKS
Sbjct: 422 ITADASGVDRKVGKMVNFAYVFGSGPSTIAAQAGITFPEAKRVIAGFEQSYPEVTALSKS 481
Query: 656 DAKSKARKMYTLT-KGKKL 673
+ A Y +T G++L
Sbjct: 482 LQREAANLGYVITPTGRRL 500
>gi|421171504|ref|ZP_15629362.1| DNA polymerase I, partial [Pseudomonas aeruginosa ATCC 700888]
gi|404519820|gb|EKA30530.1| DNA polymerase I, partial [Pseudomonas aeruginosa ATCC 700888]
Length = 891
Score = 39.3 bits (90), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 97/258 (37%), Gaps = 66/258 (25%)
Query: 550 GSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATD 609
G +R AP GY ++ AD EL I ++ AK+ G L ++ A +
Sbjct: 671 GRRIRQAFVAPQGYKLLAADYSQIELRIM-----AHLAKDDGLLDAFRHDLDVHRATAAE 725
Query: 610 MHSITAKAV-GISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLT 668
+ + + V G R AK IN+ IYG A L KQ E ++ A
Sbjct: 726 VFGVPLEDVSGDQRRSAKAINFGLIYGMS---AFGLAKQIGVERKEAQA----------- 771
Query: 669 KGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQWYGGTESAMFNR--- 725
I R +++Y AY +++ + G E+ +F R
Sbjct: 772 ---------------YIDRYFARYPG---VLAY---MERTRAQAAEQGFVET-LFGRRLY 809
Query: 726 LEEIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLVCM-RW 784
L EI + N + +A E +T IN +Q A D + +V + W
Sbjct: 810 LPEIHSK--------NGAMRKAAE----------RTAINAPMQGTAADIMKRAMVAVDNW 851
Query: 785 LVSR--DTRFVISIHDEI 800
L D R ++ +HDE+
Sbjct: 852 LQESGLDARVILQVHDEL 869
>gi|12657895|ref|NP_075308.1| gp41 [Mycobacterium phage Bxb1]
gi|12584036|gb|AAG59746.1| gp41 [Mycobacterium phage Bxb1]
Length = 608
Score = 39.3 bits (90), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 62/139 (44%), Gaps = 31/139 (22%)
Query: 553 LRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMHS 612
+R A G ++ D +QEL + + + + + K NA D+H
Sbjct: 375 VRRCFLADPGQLMVSVDYQAQELRVLAALANDRT------------MIQAFKDNA-DLHQ 421
Query: 613 ITAKAVGISREHAKIINYARIYGAGERF-----------AERLLKQFN---PE---MSKS 655
ITA A G+ R+ K++N+A ++G+G A+R++ F PE +SKS
Sbjct: 422 ITADASGVDRKVGKMVNFAYVFGSGPSTIAAQAGITFPEAKRVIAGFEQSYPEVTALSKS 481
Query: 656 DAKSKARKMYTLT-KGKKL 673
+ A Y +T G++L
Sbjct: 482 LQREAANLGYVITPTGRRL 500
>gi|262212201|gb|ACY35717.1| DNA polymerase [Uncultured T7-like podovirus]
Length = 192
Score = 39.3 bits (90), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 33/56 (58%), Gaps = 3/56 (5%)
Query: 609 DMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKM 664
D+H + A +GISR+ K + YA +YGAG+ E++ + +S AK K +++
Sbjct: 57 DIHQVNADKIGISRKLVKTVTYAFLYGAGD---EKIGHSHDKPLSSQAAKKKGKEI 109
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.317 0.134 0.398
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,431,950,427
Number of Sequences: 23463169
Number of extensions: 619695608
Number of successful extensions: 1673092
Number of sequences better than 100.0: 667
Number of HSP's better than 100.0 without gapping: 316
Number of HSP's successfully gapped in prelim test: 351
Number of HSP's that attempted gapping in prelim test: 1669732
Number of HSP's gapped (non-prelim): 1761
length of query: 899
length of database: 8,064,228,071
effective HSP length: 152
effective length of query: 747
effective length of database: 8,792,793,679
effective search space: 6568216878213
effective search space used: 6568216878213
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 82 (36.2 bits)