Your job contains 1 sequence.
>psy15891
MTDESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTL
ATFEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVT
LAGMLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHDDKYKDSL
WLWDQDWSVKDLKLKKKANKTLSVDQETEEPEEFYEINKNGEDQTEDEFVKRRRELVEKF
KPLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTSEAWIPGP
SLISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTDIKVPDAENIPLEQLKQLYNN
ITKQDNCEANVDNAQNSLRDSVETNISFIDCSKSAKRLEVIANVLDKKKLAEASSTDTST
DDADTPREIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEISRMLSY
WRNNHERVKKQFVVWLNKKDLPRRLVENIESEGRDYGVILPQLIVSGTLTRRAVEATWMT
ASNAVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTL
SGQKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSK
ARKMYTLTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQWYGGTES
AMFNRLEEIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLV
CMRWLVSRDTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIPLSI
SFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKANGVIGTFKN
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy15891
(899 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0004406 - symbol:tam "tamas" species:7227 "Drosoph... 1703 1.5e-212 2
UNIPROTKB|F1SK24 - symbol:POLG "Uncharacterized protein" ... 1295 9.7e-210 3
UNIPROTKB|P54098 - symbol:POLG "DNA polymerase subunit ga... 1278 4.2e-207 3
ZFIN|ZDB-GENE-060303-1 - symbol:polg "polymerase (DNA dir... 1199 6.9e-205 3
UNIPROTKB|E1BDI3 - symbol:POLG "Uncharacterized protein" ... 1296 1.2e-177 2
UNIPROTKB|E2QRS5 - symbol:POLG "Uncharacterized protein" ... 1275 1.7e-176 2
MGI|MGI:1196389 - symbol:Polg "polymerase (DNA directed),... 1269 5.8e-176 2
RGD|620057 - symbol:Polg "polymerase (DNA directed), gamm... 1273 2.1e-156 2
UNIPROTKB|Q91684 - symbol:polg "DNA polymerase subunit ga... 1256 4.4e-154 2
UNIPROTKB|F1P0C5 - symbol:POLG "DNA polymerase subunit ga... 920 2.7e-141 3
CGD|CAL0004952 - symbol:orf19.3431 species:5476 "Candida ... 582 1.8e-118 5
UNIPROTKB|Q92076 - symbol:POLG "DNA polymerase subunit ga... 961 4.3e-113 2
ASPGD|ASPL0000055321 - symbol:AN0040 species:162425 "Emer... 588 1.9e-111 5
SGD|S000005857 - symbol:MIP1 "Mitochondrial DNA polymeras... 536 1.7e-109 4
UNIPROTKB|F1P2H1 - symbol:POLG "DNA polymerase" species:9... 922 5.6e-109 2
POMBASE|SPCC24B10.22 - symbol:pog1 "mitochondrial DNA pol... 586 2.4e-106 3
WB|WBGene00013258 - symbol:polg-1 species:6239 "Caenorhab... 395 2.8e-75 4
UNIPROTKB|H0YD36 - symbol:POLG "DNA polymerase subunit ga... 381 3.3e-34 1
UNIPROTKB|H0YCV2 - symbol:POLG "DNA polymerase subunit ga... 246 2.3e-24 2
UNIPROTKB|H0YCD2 - symbol:POLG "DNA polymerase subunit ga... 159 2.1e-10 1
UNIPROTKB|H0YDF1 - symbol:POLG "DNA polymerase subunit ga... 159 2.1e-10 1
>FB|FBgn0004406 [details] [associations]
symbol:tam "tamas" species:7227 "Drosophila melanogaster"
[GO:0006261 "DNA-dependent DNA replication" evidence=ISS;NAS;IDA]
[GO:0005760 "gamma DNA polymerase complex" evidence=ISS;IDA]
[GO:0003887 "DNA-directed DNA polymerase activity"
evidence=ISS;NAS;IDA] [GO:0008296 "3'-5'-exodeoxyribonuclease
activity" evidence=NAS] [GO:0005739 "mitochondrion"
evidence=ISS;NAS] [GO:0006264 "mitochondrial DNA replication"
evidence=TAS] [GO:0007562 "eclosion" evidence=NAS] [GO:0008340
"determination of adult lifespan" evidence=NAS] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR001098 InterPro:IPR002297
InterPro:IPR019760 Pfam:PF00476 PRINTS:PR00867 PROSITE:PS00447
SMART:SM00482 GO:GO:0008340 EMBL:AE014134 GO:GO:0003677
GO:GO:0007562 GO:GO:0003887 GO:GO:0005760 GO:GO:0006264
eggNOG:COG0749 PANTHER:PTHR10267 EMBL:U60298 EMBL:U62547
EMBL:AY089226 EMBL:BT044244 PIR:T13808 PIR:T13810
RefSeq:NP_476821.1 UniGene:Dm.2292 ProteinModelPortal:Q27607
IntAct:Q27607 STRING:Q27607 PaxDb:Q27607 EnsemblMetazoa:FBtr0080571
GeneID:34792 KEGG:dme:Dmel_CG8987 CTD:8205 FlyBase:FBgn0004406
GeneTree:ENSGT00390000000453 InParanoid:Q27607 KO:K02332
OMA:DIPGCWF OrthoDB:EOG4931ZQ PhylomeDB:Q27607 GenomeRNAi:34792
NextBio:790246 Bgee:Q27607 GermOnline:CG8987 Uniprot:Q27607
Length = 1145
Score = 1703 (604.5 bits), Expect = 1.5e-212, Sum P(2) = 1.5e-212
Identities = 347/667 (52%), Positives = 446/667 (66%)
Query: 234 RELVEKFKPLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHDGISDTS 293
R L KF+ L + LP L GYP WYRKLC KP + D + + D
Sbjct: 488 RRLQAKFQHLYDQQALLPARRPLLPGYPLWYRKLCRKPPAKRADEI---------LEDDE 538
Query: 294 EAWIPGPSLISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTDIKVPDAENIPLEQ 353
E W PG S IST MQI PKLLSL W+ PLH+ R GWG+LVP+ +D + D +P+EQ
Sbjct: 539 EPWSPGASEISTGMQIAPKLLSLCWEGYPLHYEREQGWGFLVPFRSDSEGVD--RLPMEQ 596
Query: 354 LKQL--YNNITKQDNCEANVDNAQNSLRDSVETNISFIDCSKSAKRLEVIANVLDKKKLA 411
L + +A D A + L VE ++ KR E + K++
Sbjct: 597 LLAHCPVPEFARLSASKAESDMAFDMLPGQVEQHLG--------KR-EHYKKLSQKQQRL 647
Query: 412 EXXXXXXXXXXXXXPREIGF-IKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIG--- 467
E + F +KLPHK+G VGNPLS+DF+NKF++N L+ D
Sbjct: 648 ETQYQGSGVWCNKVLDDCCFFLKLPHKNGPSFRVGNPLSKDFLNKFAENVLSSGDPSCQA 707
Query: 468 AKRIIEISRMLSYWRNNHERVKKQFVVWLNKKDLPRRLVENIESEGRDYGVILPQLIVSG 527
A R+I+I+RM+SYWRNN +R+ Q VVWL+ + LP + + YG I PQ++ G
Sbjct: 708 AARVIDIARMMSYWRNNRDRIMGQMVVWLDSQQLPNEFTGE-KCQPIAYGAICPQVVACG 766
Query: 528 TLTRRAVEATWMTASNAVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCA 587
TLTRRA+E TWMTASN+ +R+GSELR+M+QAP GY ++GADVDSQELWIASV+GD+Y
Sbjct: 767 TLTRRAMEPTWMTASNSRPDRLGSELRSMVQAPPGYRLVGADVDSQELWIASVLGDAYAC 826
Query: 588 KEHGATPLGWMTLSGQKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQ 647
EHGATPLGWMTLSG KSN +DMHSITAKAVGISR+HAK+INYARIYGAG+ FAE LL+Q
Sbjct: 827 GEHGATPLGWMTLSGSKSNGSDMHSITAKAVGISRDHAKVINYARIYGAGQLFAETLLRQ 886
Query: 648 FNPEMSKSDAKSKARKMYTLTKGKKLYRLKDGHLEELIKRVYSKYEAREVCSAYNTSVDK 707
FNP S S+AK+KA KM+++TKGK++YRL++ +EL R YS YEA + N ++ +
Sbjct: 887 FNPTFSASEAKAKAMKMFSITKGKRVYRLREEFHDELEDRAYSSYEASRLAIQRNRTLAE 946
Query: 708 IFDKPQWYGGTESAMFNRLEEIATSLQPVTPFLNCRLSRALEPVS--EDDSKFIQTRINW 765
+F +P W GGTESAMFNRLEEIAT QP TPFL RLSRALE + E + +F+ TRINW
Sbjct: 947 VFHRPNWQGGTESAMFNRLEEIATGSQPRTPFLGGRLSRALEADTGPEQEQRFLPTRINW 1006
Query: 766 VVQSGAVDFLHLMLVCMRWLVSRDTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRA 825
VVQSGAVDFLHLMLV MRWL+ RF +S HDE+RYLV +E + ALA+H+TNL+TR+
Sbjct: 1007 VVQSGAVDFLHLMLVSMRWLMGSHVRFCLSFHDELRYLVKEELSPKAALAMHITNLMTRS 1066
Query: 826 FCIKKLDMTDIPLSISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQ 885
FC+ ++ + D+P+S++FFS VE+D VLRKE DCKTPSNP+GL GYGI G+ L + +
Sbjct: 1067 FCVSRIGLQDLPMSVAFFSSVEVDTVLRKECTMDCKTPSNPHGLRIGYGIQPGQSLSVAE 1126
Query: 886 TIDKANG 892
I+KA G
Sbjct: 1127 AIEKAGG 1133
Score = 374 (136.7 bits), Expect = 1.5e-212, Sum P(2) = 1.5e-212
Identities = 96/258 (37%), Positives = 133/258 (51%)
Query: 49 HNLMTYCAKDTLATFEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALF 108
H L YC DTL+ E +F+E V + L+ D AT +++ L+
Sbjct: 327 HRL--YCGGDTLSK-EPRN----IFVEGTLEQVRQS-FQSLTNYCASDVEATHRILRVLY 378
Query: 109 PLFLERFPHPVTLAGMLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQAC 168
PL+ ERFPHP +LAGMLE+ +AYLPVN+NW +Y E+ T+ DL++E K L + ++AC
Sbjct: 379 PLYAERFPHPASLAGMLEMGSAYLPVNSNWERYIREAQLTYEDLSIEAKYHLGRRAEEAC 438
Query: 169 SLLHDDKYKDSLWLWDQDWSVXXXXXXXXXXXXXSVDQETEEPEEFYEINKNGEDQTEDE 228
SLL DD+Y+ +LWLWD+DWSV +P E+ +G T +E
Sbjct: 439 SLLLDDQYRQNLWLWDEDWSVQELKLK---------QPPKRKPLPTVELKDSGN--TPEE 487
Query: 229 FVKRRRELVEKFKPLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHS--ADKDAVSKQELIH 286
R L KF+ L + LP L GYP WYRKLC KP + AD+ +E
Sbjct: 488 -----RRLQAKFQHLYDQQALLPARRPLLPGYPLWYRKLCRKPPAKRADEILEDDEEPWS 542
Query: 287 DGISDTSEAWIPGPSLIS 304
G S+ S P L+S
Sbjct: 543 PGASEISTGMQIAPKLLS 560
Score = 282 (104.3 bits), Expect = 8.1e-203, Sum P(2) = 8.1e-203
Identities = 51/93 (54%), Positives = 66/93 (70%)
Query: 3 DESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLAT 62
D W SSLNSL EV++LYC G L K RNIFVEG+LE + ++ +L YCA D AT
Sbjct: 311 DLGWLEQSSLNSLVEVHRLYCGGDTLSKEPRNIFVEGTLEQVRQSFQSLTNYCASDVEAT 370
Query: 63 FEVIQALFPLFLERFPHPVTLAGMLELSTAYLP 95
+++ L+PL+ ERFPHP +LAGMLE+ +AYLP
Sbjct: 371 HRILRVLYPLYAERFPHPASLAGMLEMGSAYLP 403
>UNIPROTKB|F1SK24 [details] [associations]
symbol:POLG "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042645 "mitochondrial nucleoid" evidence=IEA]
[GO:0007568 "aging" evidence=IEA] [GO:0006287 "base-excision
repair, gap-filling" evidence=IEA] [GO:0006264 "mitochondrial DNA
replication" evidence=IEA] [GO:0005743 "mitochondrial inner
membrane" evidence=IEA] [GO:0004527 "exonuclease activity"
evidence=IEA] [GO:0003887 "DNA-directed DNA polymerase activity"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0002020 "protease binding" evidence=IEA] [GO:0005760 "gamma DNA
polymerase complex" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR001098 InterPro:IPR002297
InterPro:IPR016265 InterPro:IPR019760 Pfam:PF00476
PIRSF:PIRSF000797 PRINTS:PR00867 PROSITE:PS00447 SMART:SM00482
GO:GO:0005743 GO:GO:0003677 GO:GO:0007568 GO:GO:0003682
GO:GO:0042645 GO:GO:0004527 GO:GO:0003887 GO:GO:0005760
GO:GO:0006264 GO:GO:0006287 PANTHER:PTHR10267
GeneTree:ENSGT00390000000453 KO:K02332 OMA:DIPGCWF CTD:5428
EMBL:CT943647 RefSeq:XP_001927099.1 UniGene:Ssc.41320
Ensembl:ENSSSCT00000002060 GeneID:100157469 KEGG:ssc:100157469
Uniprot:F1SK24
Length = 1224
Score = 1295 (460.9 bits), Expect = 9.7e-210, Sum P(3) = 9.7e-210
Identities = 267/483 (55%), Positives = 336/483 (69%)
Query: 431 FIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAK--RIIEISRMLSYWRNNHERV 488
F KLPHKDG NVG+P ++DF+ K D +L GA R +EI++M+S+WRN H+R+
Sbjct: 734 FFKLPHKDGNSYNVGSPFAKDFLPKMEDGTLQAGPGGASGPRALEINKMISFWRNAHKRI 793
Query: 489 KKQFVVWLNKKDLPRRLVEN--IESEGRDYGVILPQLIVSGTLTRRAVEATWMTASNAVG 546
Q VVWL + LPR + + + EGR YG ILPQ++ +GT+TRRAVE TW+TASNA
Sbjct: 794 SSQMVVWLPRSALPRAVTRHPAFDEEGR-YGAILPQVVTAGTITRRAVEPTWLTASNARP 852
Query: 547 ERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSN 606
+RVGSEL+AM+QAP GY ++GADVDSQELWIA+V+GD++ A HG T GWMTL G+KS
Sbjct: 853 DRVGSELKAMVQAPPGYVLVGADVDSQELWIAAVLGDAHFAGMHGCTAFGWMTLQGRKSR 912
Query: 607 ATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYT 666
TD+HS TA VGISREHAKI NY RIYGAG+ FAERLL QFN +++ +A KA++MY
Sbjct: 913 GTDLHSKTAATVGISREHAKIFNYGRIYGAGQPFAERLLMQFNHRLTRQEAAEKAQQMYA 972
Query: 667 LTKGKKLYRLKD-GH--LEEL---IKRV----YSKYEAREVC-SAYNTSVDKIFD---KP 712
+TKG + YRL D G + EL + R S + R++ A S K ++ +
Sbjct: 973 VTKGLRRYRLSDEGEWLVRELDLPVDRTEDGWISLQDLRKIQREASRKSRRKKWEVVAER 1032
Query: 713 QWYGGTESAMFNRLEEIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAV 772
W GGTES MFN+LE IATS P TP L CR+SRALEP S +F+ +R+NWVVQS AV
Sbjct: 1033 AWTGGTESEMFNKLESIATSDTPRTPVLGCRISRALEP-STVQGEFMTSRVNWVVQSSAV 1091
Query: 773 DFLHLMLVCMRWLVSR---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIK 829
D+LHLMLV M+WL D RF ISIHDE+RYLV +E++Y ALAL VTNLLTR
Sbjct: 1092 DYLHLMLVAMKWLFEEFAIDGRFCISIHDEVRYLVREEDRYRAALALQVTNLLTRCMFAY 1151
Query: 830 KLDMTDIPLSISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDK 889
KL + D+P S++FFS V+ID+ LRKE DCKTPSNP G+ K YGIP GE LDIYQ I+
Sbjct: 1152 KLGLNDLPQSVAFFSAVDIDQCLRKEVTMDCKTPSNPTGMEKRYGIPQGEALDIYQIIEL 1211
Query: 890 ANG 892
G
Sbjct: 1212 TKG 1214
Score = 496 (179.7 bits), Expect = 9.7e-210, Sum P(3) = 9.7e-210
Identities = 144/411 (35%), Positives = 188/411 (45%)
Query: 96 DTLATFEVIQALFPLFLERFPHPVTLAGMLELSTAYLPVNNNWVKYFNESCQTFNDLNVE 155
D ATFEV Q PLFLER PHPVTLAGMLE+ +YLPVN NW +Y E+ T+ +L E
Sbjct: 384 DVWATFEVFQQQLPLFLERCPHPVTLAGMLEMGVSYLPVNQNWERYLAEAQSTYEELQRE 443
Query: 156 MKSLLMDKCDQACSLLHDDKYKDSLWLWDQDWSVXXXXXXXXXXXXXSVDQETEE----- 210
MK LMD + AC LL ++YK+ WLWD +W + +
Sbjct: 444 MKKSLMDLANDACQLLSGERYKEDPWLWDLEWDLQEFKQKKAKKLKRKEPATASKLPIEG 503
Query: 211 ---PEEFYEINKNGEDQTEDEFVKRRRELVEKFKPLMQTKDRLPVNSSYLIGYPEWYRKL 267
P + E G E+EF + + + L T + LP +L G+P WYRKL
Sbjct: 504 AGAPGDPKEQEDPGPPSEEEEFQQDVMART-RLEQLRGTTELLPKRPQHLPGHPGWYRKL 562
Query: 268 CVKPHSADKDAVSKQELIHDGISDTSEAWIPGPSLISTSMQITPKLLSLTWKSMPLHFIR 327
C P D AW PGPSL+S M+ITPKL++LTW PLH+
Sbjct: 563 C--PRLDDP------------------AWTPGPSLLSLQMRITPKLMALTWDGFPLHYSE 602
Query: 328 GHGWGYLVPYSTD--IKVPD------AENIPLEQLKQLYN-NITKQDNCEANVDNA---- 374
HGWGYLVP D KVP A P ++ LY + +Q + + A
Sbjct: 603 QHGWGYLVPGRRDNLAKVPGMAPASTAVPCPYTAIESLYRKHCLEQGRQQPELQEAGLAE 662
Query: 375 QNSLRDS--VETNISFIDCSKSAKRLEVIANV-LDKKKLAEX----XXXXXXXXXXXXP- 426
+ L DS V + + C LEV A L+K + A+ P
Sbjct: 663 EFLLTDSGTVWQTVEELGC------LEVEAEATLEKLRAADPGQPPALTATGSPQASRPA 716
Query: 427 --------REIG-----FIKLPHKDGEHLNVGNPLSRDFINKFSDNSL-AG 463
E+ F KLPHKDG NVG+P ++DF+ K D +L AG
Sbjct: 717 HHHGNGPYNEVDVPGCWFFKLPHKDGNSYNVGSPFAKDFLPKMEDGTLQAG 767
Score = 276 (102.2 bits), Expect = 9.7e-210, Sum P(3) = 9.7e-210
Identities = 50/90 (55%), Positives = 68/90 (75%)
Query: 6 WTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLATFEV 65
W ++SS+N+L++V+ LY G L+K R +FV+G+++DI N+ +LM YCA+D ATFEV
Sbjct: 332 WLDISSVNNLADVHHLYVGGPPLEKEPRELFVKGNMKDIRENFQDLMRYCAQDVWATFEV 391
Query: 66 IQALFPLFLERFPHPVTLAGMLELSTAYLP 95
Q PLFLER PHPVTLAGMLE+ +YLP
Sbjct: 392 FQQQLPLFLERCPHPVTLAGMLEMGVSYLP 421
>UNIPROTKB|P54098 [details] [associations]
symbol:POLG "DNA polymerase subunit gamma-1" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008219
"cell death" evidence=IEA] [GO:0004527 "exonuclease activity"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005760 "gamma DNA polymerase complex"
evidence=IEA] [GO:0006264 "mitochondrial DNA replication"
evidence=IEA] [GO:0007568 "aging" evidence=IEA] [GO:0002020
"protease binding" evidence=IPI] [GO:0003682 "chromatin binding"
evidence=IDA] [GO:0003887 "DNA-directed DNA polymerase activity"
evidence=IDA] [GO:0006287 "base-excision repair, gap-filling"
evidence=IDA] [GO:0006259 "DNA metabolic process" evidence=TAS]
[GO:0005739 "mitochondrion" evidence=TAS] [GO:0006261
"DNA-dependent DNA replication" evidence=TAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0042645 "mitochondrial nucleoid"
evidence=IDA] InterPro:IPR001098 InterPro:IPR002297
InterPro:IPR012337 InterPro:IPR016265 InterPro:IPR019760
Pfam:PF00476 PIRSF:PIRSF000797 PRINTS:PR00867 PROSITE:PS00447
SMART:SM00482 GO:GO:0005743 GO:GO:0003677 GO:GO:0007568
GO:GO:0008219 GO:GO:0003682 GO:GO:0006261 GO:GO:0042645
GO:GO:0004527 Orphanet:254892 SUPFAM:SSF53098 MIM:256000
GO:GO:0003887 GO:GO:0005760 GO:GO:0006264 GO:GO:0006287
eggNOG:COG0749 HOGENOM:HOG000176668 HOVERGEN:HBG051400
OrthoDB:EOG4X0MRH PANTHER:PTHR10267 KO:K02332 OMA:DIPGCWF
EMBL:U60325 EMBL:X98093 EMBL:D84103 EMBL:AF497906 EMBL:BC042571
EMBL:BC050559 IPI:IPI00004317 PIR:G02750 RefSeq:NP_001119603.1
RefSeq:NP_002684.1 UniGene:Hs.706868 PDB:3IKM PDBsum:3IKM
ProteinModelPortal:P54098 IntAct:P54098 MINT:MINT-4531455
STRING:P54098 PhosphoSite:P54098 DMDM:1706507 PaxDb:P54098
PeptideAtlas:P54098 PRIDE:P54098 Ensembl:ENST00000268124
Ensembl:ENST00000442287 GeneID:5428 KEGG:hsa:5428 UCSC:uc002bnr.4
CTD:5428 GeneCards:GC15M089859 HGNC:HGNC:9179 MIM:157640 MIM:174763
MIM:203700 MIM:258450 MIM:607459 MIM:613662 neXtProt:NX_P54098
Orphanet:726 Orphanet:254886 Orphanet:298 Orphanet:94125
Orphanet:70595 Orphanet:254881 PharmGKB:PA33500 InParanoid:P54098
PhylomeDB:P54098 BindingDB:P54098 ChEMBL:CHEMBL2732 GenomeRNAi:5428
NextBio:21001 ArrayExpress:P54098 Bgee:P54098 CleanEx:HS_POLG
Genevestigator:P54098 GermOnline:ENSG00000140521 Uniprot:P54098
Length = 1239
Score = 1278 (454.9 bits), Expect = 4.2e-207, Sum P(3) = 4.2e-207
Identities = 263/483 (54%), Positives = 335/483 (69%)
Query: 431 FIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAK--RIIEISRMLSYWRNNHERV 488
F KLPHKDG NVG+P ++DF+ K D +L GA R +EI++M+S+WRN H+R+
Sbjct: 749 FFKLPHKDGNSCNVGSPFAKDFLPKMEDGTLQAGPGGASGPRALEINKMISFWRNAHKRI 808
Query: 489 KKQFVVWLNKKDLPRRLVEN--IESEGRDYGVILPQLIVSGTLTRRAVEATWMTASNAVG 546
Q VVWL + LPR ++ + + EG YG ILPQ++ +GT+TRRAVE TW+TASNA
Sbjct: 809 SSQMVVWLPRSALPRAVIRHPDYDEEGL-YGAILPQVVTAGTITRRAVEPTWLTASNARP 867
Query: 547 ERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSN 606
+RVGSEL+AM+QAP GY+++GADVDSQELWIA+V+GD++ A HG T GWMTL G+KS
Sbjct: 868 DRVGSELKAMVQAPPGYTLVGADVDSQELWIAAVLGDAHFAGMHGCTAFGWMTLQGRKSR 927
Query: 607 ATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYT 666
TD+HS TA VGISREHAKI NY RIYGAG+ FAERLL QFN +++ +A KA++MY
Sbjct: 928 GTDLHSKTATTVGISREHAKIFNYGRIYGAGQPFAERLLMQFNHRLTQQEAAEKAQQMYA 987
Query: 667 LTKGKKLYRLKD-GH--LEEL---IKRV----YSKYEAREVC--SAYNTSVDK--IFDKP 712
TKG + YRL D G + EL + R S + R+V +A + K + +
Sbjct: 988 ATKGLRWYRLSDEGEWLVRELNLPVDRTEGGWISLQDLRKVQRETARKSQWKKWEVVAER 1047
Query: 713 QWYGGTESAMFNRLEEIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAV 772
W GGTES MFN+LE IATS P TP L C +SRALEP S +F+ +R+NWVVQS AV
Sbjct: 1048 AWKGGTESEMFNKLESIATSDIPRTPVLGCCISRALEP-SAVQEEFMTSRVNWVVQSSAV 1106
Query: 773 DFLHLMLVCMRWLVSR---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIK 829
D+LHLMLV M+WL D RF ISIHDE+RYLV +E++Y ALAL +TNLLTR
Sbjct: 1107 DYLHLMLVAMKWLFEEFAIDGRFCISIHDEVRYLVREEDRYRAALALQITNLLTRCMFAY 1166
Query: 830 KLDMTDIPLSISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDK 889
KL + D+P S++FFS V+ID+ LRKE DCKTPSNP G+ + YGIP GE LDIYQ I+
Sbjct: 1167 KLGLNDLPQSVAFFSAVDIDRCLRKEVTMDCKTPSNPTGMERRYGIPQGEALDIYQIIEL 1226
Query: 890 ANG 892
G
Sbjct: 1227 TKG 1229
Score = 486 (176.1 bits), Expect = 4.2e-207, Sum P(3) = 4.2e-207
Identities = 141/409 (34%), Positives = 189/409 (46%)
Query: 96 DTLATFEVIQALFPLFLERFPHPVTLAGMLELSTAYLPVNNNWVKYFNESCQTFNDLNVE 155
D AT EV Q PLFLER PHPVTLAGMLE+ +YLPVN NW +Y E+ T+ +L E
Sbjct: 399 DVWATHEVFQQQLPLFLERCPHPVTLAGMLEMGVSYLPVNQNWERYLAEAQGTYEELQRE 458
Query: 156 MKSLLMDKCDQACSLLHDDKYKDSLWLWDQDWSVXXXXXXXXXXXXXSVDQETEEPEEFY 215
MK LMD + AC LL ++YK+ WLWD +W + ++ P E
Sbjct: 459 MKKSLMDLANDACQLLSGERYKEDPWLWDLEWDLQEFKQKKAKKVKKEPATASKLPIEGA 518
Query: 216 EINKNGEDQT-------EDEFVK--RRRELVEKFKPLMQTKDRLPVNSSYLIGYPEWYRK 266
+ DQ E+EF + R ++K K T + LP +L G+P WYRK
Sbjct: 519 GAPGDPMDQEDLGPCSEEEEFQQDVMARACLQKLKG---TTELLPKRPQHLPGHPGWYRK 575
Query: 267 LCVKPHSADKDAVSKQELIHDGISDTSEAWIPGPSLISTSMQITPKLLSLTWKSMPLHFI 326
LC P D AW PGPSL+S M++TPKL++LTW PLH+
Sbjct: 576 LC--PRLDDP------------------AWTPGPSLLSLQMRVTPKLMALTWDGFPLHYS 615
Query: 327 RGHGWGYLVPYSTD--IKVPDAENI-------PLEQLKQLYNNIT----KQDNC--EANV 371
HGWGYLVP D K+P + P ++ LY KQ EA +
Sbjct: 616 ERHGWGYLVPGRRDNLAKLPTGTTLESAGVVCPYRAIESLYRKHCLEQGKQQLMPQEAGL 675
Query: 372 DN----AQNS-LRDSVETNISFIDCSKSAKRLEVIANVLDKKKLAEXXXXXXXXXXXXXP 426
NS + +VE + +++ AK +E + + + LA
Sbjct: 676 AEEFLLTDNSAIWQTVE-ELDYLEVEAEAK-MENLRAAVPGQPLALTARGGPKDTQPSYH 733
Query: 427 REIG-----------FIKLPHKDGEHLNVGNPLSRDFINKFSDNSL-AG 463
G F KLPHKDG NVG+P ++DF+ K D +L AG
Sbjct: 734 HGNGPYNDVDIPGCWFFKLPHKDGNSCNVGSPFAKDFLPKMEDGTLQAG 782
Score = 278 (102.9 bits), Expect = 4.2e-207, Sum P(3) = 4.2e-207
Identities = 51/90 (56%), Positives = 68/90 (75%)
Query: 6 WTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLATFEV 65
W ++SS+NSL+EV++LY G L+K R +FV+G+++DI N+ +LM YCA+D AT EV
Sbjct: 347 WLDISSVNSLAEVHRLYVGGPPLEKEPRELFVKGTMKDIRENFQDLMQYCAQDVWATHEV 406
Query: 66 IQALFPLFLERFPHPVTLAGMLELSTAYLP 95
Q PLFLER PHPVTLAGMLE+ +YLP
Sbjct: 407 FQQQLPLFLERCPHPVTLAGMLEMGVSYLP 436
>ZFIN|ZDB-GENE-060303-1 [details] [associations]
symbol:polg "polymerase (DNA directed), gamma"
species:7955 "Danio rerio" [GO:0003887 "DNA-directed DNA polymerase
activity" evidence=IEA] [GO:0005760 "gamma DNA polymerase complex"
evidence=IEA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0006261 "DNA-dependent
DNA replication" evidence=IEA] InterPro:IPR001098
InterPro:IPR002297 InterPro:IPR016265 InterPro:IPR019760
Pfam:PF00476 PIRSF:PIRSF000797 PRINTS:PR00867 PROSITE:PS00447
SMART:SM00482 ZFIN:ZDB-GENE-060303-1 GO:GO:0003677 GO:GO:0006261
GO:GO:0003887 GO:GO:0005760 PANTHER:PTHR10267
GeneTree:ENSGT00390000000453 EMBL:CR759744 EMBL:CR854881
IPI:IPI00490082 Ensembl:ENSDART00000086397
Ensembl:ENSDART00000150129 Uniprot:E7FH64
Length = 1206
Score = 1199 (427.1 bits), Expect = 6.9e-205, Sum P(3) = 6.9e-205
Identities = 272/635 (42%), Positives = 360/635 (56%)
Query: 96 DTLATFEVIQALFPLFLERFPHPVTLAGMLELSTAYLPVNNNWVKYFNESCQTFNDLNVE 155
D LAT EV PLF+ER PHPVTLAGMLE+ YLPVN+NW +Y ++ T+ +L E
Sbjct: 368 DVLATQEVFTQQLPLFMERCPHPVTLAGMLEMGVCYLPVNHNWRRYLEDAQATYEELQRE 427
Query: 156 MKSLLMDKCDQACSLLHDDKYKDSLWLWDQDWSVXXXXXXXXXXXXXSVDQETEEPEEFY 215
MK LM D AC LL DD+YKD WLWD DW V QE E E
Sbjct: 428 MKKSLMILADDACQLLQDDRYKDDPWLWDLDWDVQEFKQKKVPVSKKKAKQEAEATEAAN 487
Query: 216 EINKNG--ED-----QTEDEFVKRRRELVEKFKPLMQTKDRLPVNSSYLIGYPEWYRKLC 268
+ ED + E+ RREL+++ K +T LP +L +P WYRKLC
Sbjct: 488 DSEAIDWPEDPGPPLEEEEGDSDPRRELLQRLK---ETVSCLPKRRQHLPAHPSWYRKLC 544
Query: 269 VKPHSADKDAVSKQELIHDGISDTSEAWIPGPSLISTSMQITPKLLSLTWKSMPLHFIRG 328
VK A E W PG SLIS M+ITPKL+ LTW PLH+
Sbjct: 545 VKMSEA-------------------EDWSPGASLISLQMRITPKLMGLTWDGFPLHYTDQ 585
Query: 329 HGWGYLVPY---STDIKVPDAENI-PLEQLKQLYNNITKQDNCEANVDNAQNSLRDSVE- 383
HGWGYLVP + DI + E + P ++ +Y +Q E + + D +
Sbjct: 586 HGWGYLVPGRRDNLDISEDNEEPVCPYRAIESVYKEYCEQKGKE-QPKYPDSPVSDELML 644
Query: 384 TNISFIDCSKSAKRLEV-----IANVLDKKKLAEXXXXXXXXXXXXXPREIG-------- 430
T+ + + RLE+ ++ K++ + P G
Sbjct: 645 TDTAVWQTVEEVSRLEMFDDEALSTAAPSKRITKKVNSVFKSLNGECPYHHGNGPYNDVN 704
Query: 431 -----FIKLPHKDGEHLNVGNPLSRDFINKFSDNSL-AGVD-IGAKRIIEISRMLSYWRN 483
F KLPHKDG NVG+P S+DF++K +L AG + A R +EI++M+S+WRN
Sbjct: 705 IPGCWFFKLPHKDGNENNVGSPFSKDFLSKMESGTLQAGREGTNATRALEINKMISFWRN 764
Query: 484 NHERVKKQFVVWLNKKDLPR--RLVENIESEGRDYGVILPQLIVSGTLTRRAVEATWMTA 541
+R+ Q VVWL + +LPR RL ++ + EG+ YG ILPQ+I +GT+TRRAVE TW+TA
Sbjct: 765 AQKRISSQMVVWLRRAELPRSVRLHQDYDEEGQ-YGAILPQVIPAGTVTRRAVEPTWLTA 823
Query: 542 SNAVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLS 601
SNA +RVGSEL+AM+Q P Y ++GADVDSQELWIA+++G+++ A HG T GWMTL
Sbjct: 824 SNARKDRVGSELKAMVQVPPAYHLVGADVDSQELWIAAMLGEAHFAGMHGCTAFGWMTLQ 883
Query: 602 GQKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKA 661
G+KS TD+HS TA AVGISREHAK+ NY RIYGAG+ FAERLL QFN +S+ +A KA
Sbjct: 884 GKKSQGTDLHSRTADAVGISREHAKVFNYGRIYGAGQPFAERLLMQFNHRLSQQEAAGKA 943
Query: 662 RKMYTLTKGKKLYRLKDGHLEELIKRVYSKYEARE 696
R+MY LTKG + Y L + E L++++ E E
Sbjct: 944 RQMYALTKGLRRYHLSEEG-EWLLQKLNVNVERAE 977
Score = 843 (301.8 bits), Expect = 1.4e-109, Sum P(2) = 1.4e-109
Identities = 182/376 (48%), Positives = 245/376 (65%)
Query: 431 FIKLPHKDGEHLNVGNPLSRDFINKFSDNSL-AGVD-IGAKRIIEISRMLSYWRNNHERV 488
F KLPHKDG NVG+P S+DF++K +L AG + A R +EI++M+S+WRN +R+
Sbjct: 710 FFKLPHKDGNENNVGSPFSKDFLSKMESGTLQAGREGTNATRALEINKMISFWRNAQKRI 769
Query: 489 KKQFVVWLNKKDLPR--RLVENIESEGRDYGVILPQLIVSGTLTRRAVEATWMTASNAVG 546
Q VVWL + +LPR RL ++ + EG+ YG ILPQ+I +GT+TRRAVE TW+TASNA
Sbjct: 770 SSQMVVWLRRAELPRSVRLHQDYDEEGQ-YGAILPQVIPAGTVTRRAVEPTWLTASNARK 828
Query: 547 ERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSN 606
+RVGSEL+AM+Q P Y ++GADVDSQELWIA+++G+++ A HG T GWMTL G+KS
Sbjct: 829 DRVGSELKAMVQVPPAYHLVGADVDSQELWIAAMLGEAHFAGMHGCTAFGWMTLQGKKSQ 888
Query: 607 ATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYT 666
TD+HS TA AVGISREHAK+ NY RIYGAG+ FAERLL QFN +S+ +A KAR+MY
Sbjct: 889 GTDLHSRTADAVGISREHAKVFNYGRIYGAGQPFAERLLMQFNHRLSQQEAAGKARQMYA 948
Query: 667 LTKGKKLYRL-KDGH--LEEL---IKRV----YSKYEAREVCSAYNTSVDKIFDKPQWY- 715
LTKG + Y L ++G L++L ++R S + R++ S + K +W
Sbjct: 949 LTKGLRRYHLSEEGEWLLQKLNVNVERAEDGSISLQDLRKISKVATQSTTR-GSKKKWNL 1007
Query: 716 -GG---TESAMFNRLEEIATSLQPVTPFLNCRLSRALEPV--SEDDSKFIQTRINWVVQS 769
G T+ ++ + Q P R + S +FI +R+NWVVQS
Sbjct: 1008 TAGRVWTDGTESYMFNKLESIAQSDRPATPVLNCRISRALEPSAVQEEFITSRVNWVVQS 1067
Query: 770 GAVDFLHLMLVCMRWL 785
AVD+LHLMLV MRWL
Sbjct: 1068 SAVDYLHLMLVSMRWL 1083
Score = 557 (201.1 bits), Expect = 6.9e-205, Sum P(3) = 6.9e-205
Identities = 120/225 (53%), Positives = 150/225 (66%)
Query: 675 RLKDGH--LEEL--IKRVYSKYEAREVCSAYNTSVDKIFDKPQWYGGTESAMFNRLEEIA 730
R +DG L++L I +V ++ R +N + ++ W GTES MFN+LE IA
Sbjct: 975 RAEDGSISLQDLRKISKVATQSTTRGSKKKWNLTAGRV-----WTDGTESYMFNKLESIA 1029
Query: 731 TSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLVCMRWLVSR-- 788
S +P TP LNCR+SRALEP S +FI +R+NWVVQS AVD+LHLMLV MRWL
Sbjct: 1030 QSDRPATPVLNCRISRALEP-SAVQEEFITSRVNWVVQSSAVDYLHLMLVSMRWLFEEHD 1088
Query: 789 -DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIPLSISFFSGVE 847
D RF ISIHDE+RYLV E++Y ALAL +TNLLTR KL M D+P S++FFS V+
Sbjct: 1089 IDGRFCISIHDEVRYLVTSEDRYRAALALQITNLLTRCMFAFKLGMMDLPQSVAFFSAVD 1148
Query: 848 IDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKANG 892
IDK LRKE DCKTPS+P G+ + YG+P GE LDIYQ I+ G
Sbjct: 1149 IDKCLRKEVTMDCKTPSSPAGVERRYGLPQGEALDIYQIIEITKG 1193
Score = 265 (98.3 bits), Expect = 6.9e-205, Sum P(3) = 6.9e-205
Identities = 50/90 (55%), Positives = 62/90 (68%)
Query: 6 WTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLATFEV 65
W N+SS+N+L++V+ LY G L K R +FV+GS+ DI N+ LM YCA D LAT EV
Sbjct: 316 WVNISSINNLADVHALYVGGDPLMKESRELFVKGSMSDIRGNFQELMQYCALDVLATQEV 375
Query: 66 IQALFPLFLERFPHPVTLAGMLELSTAYLP 95
PLF+ER PHPVTLAGMLE+ YLP
Sbjct: 376 FTQQLPLFMERCPHPVTLAGMLEMGVCYLP 405
Score = 42 (19.8 bits), Expect = 4.1e-50, Sum P(2) = 4.1e-50
Identities = 8/26 (30%), Positives = 15/26 (57%)
Query: 1 MTDESWTNVSSLNSLSEVYKLYCEGK 26
+++++ V ++ VYK YCE K
Sbjct: 601 ISEDNEEPVCPYRAIESVYKEYCEQK 626
Score = 40 (19.1 bits), Expect = 6.6e-50, Sum P(2) = 6.6e-50
Identities = 21/78 (26%), Positives = 33/78 (42%)
Query: 550 GSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYC---AKEH----GATPLG------ 596
GS++R + +I G + LW+AS G KEH G P G
Sbjct: 255 GSKMRFLDTMSLHMAISGLTGFQRSLWMASKYGKRKGLQEVKEHMKRLGRRPEGPKIGSW 314
Query: 597 -WMTLSGQKSNATDMHSI 613
W+ +S +N D+H++
Sbjct: 315 EWVNISSI-NNLADVHAL 331
>UNIPROTKB|E1BDI3 [details] [associations]
symbol:POLG "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042645 "mitochondrial nucleoid" evidence=IEA]
[GO:0007568 "aging" evidence=IEA] [GO:0006287 "base-excision
repair, gap-filling" evidence=IEA] [GO:0006264 "mitochondrial DNA
replication" evidence=IEA] [GO:0005743 "mitochondrial inner
membrane" evidence=IEA] [GO:0004527 "exonuclease activity"
evidence=IEA] [GO:0003887 "DNA-directed DNA polymerase activity"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0002020 "protease binding" evidence=IEA] [GO:0005760 "gamma DNA
polymerase complex" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR001098 InterPro:IPR002297
InterPro:IPR012337 InterPro:IPR016265 InterPro:IPR019760
Pfam:PF00476 PIRSF:PIRSF000797 PRINTS:PR00867 PROSITE:PS00447
SMART:SM00482 GO:GO:0005743 GO:GO:0003677 GO:GO:0007568
GO:GO:0003682 GO:GO:0042645 GO:GO:0004527 SUPFAM:SSF53098
GO:GO:0003887 GO:GO:0005760 GO:GO:0006264 GO:GO:0006287
PANTHER:PTHR10267 GeneTree:ENSGT00390000000453 OMA:DIPGCWF
EMBL:DAAA02052142 IPI:IPI00707394 PRIDE:E1BDI3
Ensembl:ENSBTAT00000011993 Uniprot:E1BDI3
Length = 1217
Score = 1296 (461.3 bits), Expect = 1.2e-177, Sum P(2) = 1.2e-177
Identities = 263/483 (54%), Positives = 335/483 (69%)
Query: 431 FIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAK--RIIEISRMLSYWRNNHERV 488
F KLPHKDG NVG+P ++DF+ K D SL GA R +EI++M+S+WRN H+R+
Sbjct: 733 FFKLPHKDGNSCNVGSPFAKDFLPKMEDGSLQAGPGGASGPRALEINKMISFWRNAHKRI 792
Query: 489 KKQFVVWLNKKDLPRRLVE--NIESEGRDYGVILPQLIVSGTLTRRAVEATWMTASNAVG 546
Q VVWL + LPR + N + EGR YG ILPQ++ +GT+TRRAVE TW+TASNA
Sbjct: 793 SSQMVVWLPRSALPRAVTRHANYDEEGR-YGAILPQVVTAGTITRRAVEPTWLTASNARP 851
Query: 547 ERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSN 606
+RVGSEL+AM+QAP GY ++GADVDSQELWIA+V+GD++ A HG T GWMTL G+KS
Sbjct: 852 DRVGSELKAMVQAPPGYVLVGADVDSQELWIAAVLGDAHFAGMHGCTAFGWMTLQGRKSR 911
Query: 607 ATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYT 666
TD+HS TA VGISREHAKIINY RIYGAG+ FAERLL QFN +++ +A KA++MY
Sbjct: 912 GTDLHSKTAATVGISREHAKIINYGRIYGAGQPFAERLLMQFNHRLTRQEAAEKAQQMYA 971
Query: 667 LTKGKKLYRLKD-GH--LEEL---IKRVYSKYEA--------REVCSAYNTSVDKIFDKP 712
+TKG + YRL D G ++EL ++R + + RE ++ +
Sbjct: 972 VTKGLRRYRLSDEGEWLVKELDLPVERTEDGWVSLKDLRKIQREASKKSRWKKWEVVAQR 1031
Query: 713 QWYGGTESAMFNRLEEIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAV 772
W GGTES MFN+LE IATS P TP L CR+SRALEP + +F+ +R+NWVVQS AV
Sbjct: 1032 AWMGGTESEMFNKLESIATSDIPRTPVLGCRISRALEPCAVR-GEFMTSRVNWVVQSSAV 1090
Query: 773 DFLHLMLVCMRWLVSR---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIK 829
D+LHLMLV M+WL D RF ISIHDE+RYLV +E++Y ALAL +TNLLTR
Sbjct: 1091 DYLHLMLVAMKWLFEEFAIDGRFCISIHDEVRYLVREEDRYRAALALQITNLLTRCMFAH 1150
Query: 830 KLDMTDIPLSISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDK 889
KL + D+P S++FFS ++ID+ LRKE DCKTPSNP G+ + YGIP GE LDIYQ I+
Sbjct: 1151 KLGLNDLPQSVAFFSTIDIDQCLRKEVTMDCKTPSNPTGMERRYGIPQGEALDIYQIIEL 1210
Query: 890 ANG 892
G
Sbjct: 1211 TKG 1213
Score = 451 (163.8 bits), Expect = 1.2e-177, Sum P(2) = 1.2e-177
Identities = 101/252 (40%), Positives = 130/252 (51%)
Query: 96 DTLATFEVIQALFPLFLERFPHPVTLAGMLELSTAYLPVNNNWVKYFNESCQTFNDLNVE 155
D AT+EV Q PLFLER PHPVTLAGMLE+ +YLPVN NW +Y E+ T+ +L E
Sbjct: 382 DAWATYEVFQQQLPLFLERCPHPVTLAGMLEMGVSYLPVNQNWERYLAEAQGTYEELQRE 441
Query: 156 MKSLLMDKCDQACSLLHDDKYKDSLWLWDQDWSVXXXXXXXXXXXXXSVDQETEE-PEEF 214
MK LMD + AC LL ++YK+ WLWD +W V + P E
Sbjct: 442 MKKSLMDLANDACQLLSGERYKEDPWLWDLEWDVQEFKQKKAKKGKRREPAAASKLPVEG 501
Query: 215 YEINKNGEDQ------TEDEFVKRRRELVEKFKPLMQTKDRLPVNSSYLIGYPEWYRKLC 268
+ + DQ +E+E +R + L T + LP +L G+P WYRKLC
Sbjct: 502 ADAPGDPRDQEDPGPPSEEEEFQRDATARTCLEQLRGTTELLPKRPQHLPGHPGWYRKLC 561
Query: 269 VKPHSADKDAVSKQELIHDGISDTSEAWIPGPSLISTSMQITPKLLSLTWKSMPLHFIRG 328
P D + W PGPSL+S M++TPKL++LTW PLH+
Sbjct: 562 --PRLDDPE------------------WTPGPSLLSLQMRVTPKLMALTWDGFPLHYSEQ 601
Query: 329 HGWGYLVPYSTD 340
HGWGYLVP D
Sbjct: 602 HGWGYLVPGRRD 613
Score = 271 (100.5 bits), Expect = 1.3e-158, Sum P(2) = 1.3e-158
Identities = 49/90 (54%), Positives = 68/90 (75%)
Query: 6 WTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLATFEV 65
W ++SS+N+L++V+ LY G L+K R +FV+G+++DI N+ +LM YCA+D AT+EV
Sbjct: 330 WLDISSVNNLADVHGLYVGGPRLEKEPRELFVKGNMKDIRENFQDLMQYCAQDAWATYEV 389
Query: 66 IQALFPLFLERFPHPVTLAGMLELSTAYLP 95
Q PLFLER PHPVTLAGMLE+ +YLP
Sbjct: 390 FQQQLPLFLERCPHPVTLAGMLEMGVSYLP 419
>UNIPROTKB|E2QRS5 [details] [associations]
symbol:POLG "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042645 "mitochondrial nucleoid"
evidence=IEA] [GO:0007568 "aging" evidence=IEA] [GO:0006287
"base-excision repair, gap-filling" evidence=IEA] [GO:0006264
"mitochondrial DNA replication" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA] [GO:0003887 "DNA-directed DNA
polymerase activity" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0002020 "protease binding" evidence=IEA]
[GO:0005760 "gamma DNA polymerase complex" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001098
InterPro:IPR002297 InterPro:IPR012337 InterPro:IPR016265
InterPro:IPR019760 Pfam:PF00476 PIRSF:PIRSF000797 PRINTS:PR00867
PROSITE:PS00447 SMART:SM00482 GO:GO:0005743 GO:GO:0003677
GO:GO:0007568 GO:GO:0003682 GO:GO:0042645 GO:GO:0004527
SUPFAM:SSF53098 GO:GO:0003887 GO:GO:0005760 GO:GO:0006264
GO:GO:0006287 PANTHER:PTHR10267 GeneTree:ENSGT00390000000453
OMA:DIPGCWF EMBL:AAEX03002321 Ensembl:ENSCAFT00000018896
Uniprot:E2QRS5
Length = 1235
Score = 1275 (453.9 bits), Expect = 1.7e-176, Sum P(2) = 1.7e-176
Identities = 263/483 (54%), Positives = 335/483 (69%)
Query: 431 FIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAK--RIIEISRMLSYWRNNHERV 488
F KLPHKDG NVG+P ++DF+ K D +L GA R +EI++M+S+WRN H+R+
Sbjct: 751 FFKLPHKDGSGCNVGSPFAKDFLPKMEDGTLQAGPGGASGPRALEINKMISFWRNAHKRI 810
Query: 489 KKQFVVWLNKKDLPRRLVEN--IESEGRDYGVILPQLIVSGTLTRRAVEATWMTASNAVG 546
Q VVWL + LPR + + + EGR YG ILPQ++ +GT+TRRAVE TW+TASNA
Sbjct: 811 SSQMVVWLPRSALPRAVTRHPDYDEEGR-YGAILPQVVTAGTITRRAVEPTWLTASNARP 869
Query: 547 ERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSN 606
+RVGSEL+AM+QAP GY +GADVDSQELWIA+V+GD++ A HG T GWMTL G+KS
Sbjct: 870 DRVGSELKAMVQAPPGYVFVGADVDSQELWIAAVLGDAHFAGMHGCTAFGWMTLQGRKSR 929
Query: 607 ATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYT 666
TD+HS TA VGISREHAKI NY RIYGAG+ FAERLL QFN +++ +A KA++MY
Sbjct: 930 GTDLHSKTAATVGISREHAKIFNYGRIYGAGQPFAERLLMQFNHRLTRQEAAEKAQQMYA 989
Query: 667 LTKGKKLYRL-KDGH--LEEL---IKRV----YSKYEAREVC-SAYNTSVDKIFD---KP 712
+TKG + YRL ++G + EL + R S + R++ A S K ++ +
Sbjct: 990 VTKGLRRYRLSEEGEWLVRELDLPVDRTEDGWVSLQDLRKIQREASRKSRWKKWEVAAER 1049
Query: 713 QWYGGTESAMFNRLEEIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAV 772
W GGTES MFN+LE IA S P TP L CR+SRALEP S +F+ +R+NWVVQS AV
Sbjct: 1050 AWRGGTESEMFNKLESIAMSDTPCTPVLGCRISRALEP-SAVKGEFMTSRVNWVVQSSAV 1108
Query: 773 DFLHLMLVCMRWLVSR---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIK 829
D+LHLMLV M+WL D RF ISIHDE+RYLV +E++Y ALAL +TNLLTR
Sbjct: 1109 DYLHLMLVAMKWLFEEFAIDGRFCISIHDEVRYLVREEDRYRAALALQITNLLTRCMFAY 1168
Query: 830 KLDMTDIPLSISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDK 889
KL + D+P S++FFS V+ID+ LRKE DCKTPSNP G+ + YGIP GE LDIYQ I+
Sbjct: 1169 KLGLNDLPQSVAFFSTVDIDQCLRKEVTMDCKTPSNPTGMERRYGIPQGEALDIYQIIEL 1228
Query: 890 ANG 892
G
Sbjct: 1229 TKG 1231
Score = 461 (167.3 bits), Expect = 1.7e-176, Sum P(2) = 1.7e-176
Identities = 104/260 (40%), Positives = 135/260 (51%)
Query: 96 DTLATFEVIQALFPLFLERFPHPVTLAGMLELSTAYLPVNNNWVKYFNESCQTFNDLNVE 155
D AT+E+ Q PLFLER PHPVTLAGMLE+ +YLPVN NW +Y E+ T+ +L E
Sbjct: 397 DVWATYEIFQQQLPLFLERCPHPVTLAGMLEMGVSYLPVNQNWERYLAEAQNTYEELQWE 456
Query: 156 MKSLLMDKCDQACSLLHDDKYKDSLWLWDQDWSVXXXXXXXXXXXXXSVDQETEE-PEEF 214
MK LMD + AC LL ++YK+ WLWD +W + + P E
Sbjct: 457 MKKSLMDLANDACQLLSGERYKEDPWLWDLEWDLQEFKQKKAKKVKRKEPTAASKLPIER 516
Query: 215 YEINKNGEDQ---TEDEFVKRRRELVEKFKPLMQTKDRLPVNSSYLIGYPEWYRKLCVKP 271
K+ ED +E+E V+R + L T + LP +L G+P WYRKLC P
Sbjct: 517 AGDPKDQEDPGPPSEEEEVQRDVTARACLEHLKGTAESLPKRPQHLPGHPGWYRKLC--P 574
Query: 272 HSADKDAVSKQELIHDGISDTSEAWIPGPSLISTSMQITPKLLSLTWKSMPLHFIRGHGW 331
D AW PGPSL+S M++TPKL+++TW PLH+ HGW
Sbjct: 575 RLDDP------------------AWTPGPSLLSLQMRVTPKLMAMTWDGFPLHYSERHGW 616
Query: 332 GYLVPYSTD-IKVPDAENIP 350
GYLVP D + AE P
Sbjct: 617 GYLVPGRRDNLAQAPAETAP 636
Score = 273 (101.2 bits), Expect = 1.3e-156, Sum P(2) = 1.3e-156
Identities = 49/90 (54%), Positives = 67/90 (74%)
Query: 6 WTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLATFEV 65
W ++SS+N+L++V+ LY G L+K R +FV+GS++DI N+ LM YCA+D AT+E+
Sbjct: 345 WLDISSVNNLADVHSLYVGGPPLEKEPRELFVKGSMKDIRENFQALMQYCAQDVWATYEI 404
Query: 66 IQALFPLFLERFPHPVTLAGMLELSTAYLP 95
Q PLFLER PHPVTLAGMLE+ +YLP
Sbjct: 405 FQQQLPLFLERCPHPVTLAGMLEMGVSYLP 434
>MGI|MGI:1196389 [details] [associations]
symbol:Polg "polymerase (DNA directed), gamma" species:10090
"Mus musculus" [GO:0002020 "protease binding" evidence=ISO]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=ISO] [GO:0003887 "DNA-directed DNA polymerase
activity" evidence=ISO] [GO:0004527 "exonuclease activity"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005739 "mitochondrion" evidence=ISO;IDA] [GO:0005743
"mitochondrial inner membrane" evidence=IDA] [GO:0005760 "gamma DNA
polymerase complex" evidence=ISO] [GO:0006260 "DNA replication"
evidence=IEA] [GO:0006261 "DNA-dependent DNA replication"
evidence=IEA] [GO:0006264 "mitochondrial DNA replication"
evidence=IMP] [GO:0007568 "aging" evidence=IMP] [GO:0008152
"metabolic process" evidence=ISO] [GO:0016740 "transferase
activity" evidence=IEA] [GO:0016779 "nucleotidyltransferase
activity" evidence=IEA] [GO:0042645 "mitochondrial nucleoid"
evidence=ISO] InterPro:IPR001098 InterPro:IPR002297
InterPro:IPR016265 InterPro:IPR019760 Pfam:PF00476
PIRSF:PIRSF000797 PRINTS:PR00867 PROSITE:PS00447 SMART:SM00482
MGI:MGI:1196389 GO:GO:0005743 GO:GO:0003677 GO:GO:0007568
GO:GO:0003682 GO:GO:0042645 GO:GO:0004527 GO:GO:0003887
GO:GO:0005760 GO:GO:0006264 eggNOG:COG0749 HOGENOM:HOG000176668
HOVERGEN:HBG051400 PANTHER:PTHR10267 EMBL:U53584 EMBL:AF268975
EMBL:AF268970 EMBL:AF268971 EMBL:AF268972 EMBL:AF268973
EMBL:AF268974 IPI:IPI00131288 UniGene:Mm.3616
ProteinModelPortal:P54099 IntAct:P54099 STRING:P54099
PhosphoSite:P54099 PRIDE:P54099 InParanoid:P54099 CleanEx:MM_POLG
Genevestigator:P54099 GermOnline:ENSMUSG00000039176 Uniprot:P54099
Length = 1239
Score = 1269 (451.8 bits), Expect = 5.8e-176, Sum P(2) = 5.8e-176
Identities = 259/483 (53%), Positives = 331/483 (68%)
Query: 431 FIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAK--RIIEISRMLSYWRNNHERV 488
F KLPHKDG + NVG+P ++DF+ K D +L GA R +EI++M+S+WRN H+R+
Sbjct: 728 FFKLPHKDGNNYNVGSPFAKDFLPKMEDGTLQAGPGGASGPRALEINKMISFWRNAHKRI 787
Query: 489 KKQFVVWLNKKDLPRRLVEN--IESEGRDYGVILPQLIVSGTLTRRAVEATWMTASNAVG 546
Q VVWL + LPR + + + EG YG ILPQ++ +GT+TRRAVE TW+TASNA
Sbjct: 788 SSQMVVWLPRSALPRVVTRHPAFDEEGH-YGAILPQVVTAGTITRRAVEPTWLTASNARP 846
Query: 547 ERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSN 606
+RVGSEL+AM+QAP GY ++GADVDSQELWIA+V+GD++ A HG T GWMTL G+KS
Sbjct: 847 DRVGSELKAMVQAPPGYVLVGADVDSQELWIAAVLGDAHFAGMHGCTAFGWMTLQGRKSR 906
Query: 607 ATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYT 666
TD+HS TA VGISREHAKI NY RIYGAG+ FAERLL QFN +++ +A KA++MY
Sbjct: 907 GTDLHSKTAATVGISREHAKIFNYGRIYGAGQSFAERLLMQFNHRLTRQEAAEKAQQMYA 966
Query: 667 LTKGKKLYRLK-DGH--LEEL---IKRVYSKYEA--------REVCSAYNTSVDKIFDKP 712
+TKG + YRL DG +++L + R + + RE ++ +
Sbjct: 967 VTKGLRRYRLSADGEWLVKQLNLPVDRTEDGWVSLQDLRMIRREASRKSRWKKWEVAAER 1026
Query: 713 QWYGGTESAMFNRLEEIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAV 772
W GGTES MFN+LE IA S P TP L C +SRALEP S +FI +R+NWVVQS AV
Sbjct: 1027 AWTGGTESEMFNKLESIAMSDTPRTPVLGCCISRALEP-SVVQGEFITSRVNWVVQSSAV 1085
Query: 773 DFLHLMLVCMRWLVSR---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIK 829
D+LHLMLV M+WL D RF ISIHDE+RYLV +E++Y ALAL +TNLLTR
Sbjct: 1086 DYLHLMLVAMKWLFEEFAIDGRFCISIHDEVRYLVREEDRYRAALALQITNLLTRCMFAY 1145
Query: 830 KLDMTDIPLSISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDK 889
KL + D+P S++FFS V+ID+ LRKE DCKTPSNP G+ + YGIP GE LDIYQ I+
Sbjct: 1146 KLGLNDLPQSVAFFSAVDIDQCLRKEVTMDCKTPSNPTGMERRYGIPQGEALDIYQIIEL 1205
Query: 890 ANG 892
G
Sbjct: 1206 TKG 1208
Score = 462 (167.7 bits), Expect = 5.8e-176, Sum P(2) = 5.8e-176
Identities = 102/250 (40%), Positives = 132/250 (52%)
Query: 96 DTLATFEVIQALFPLFLERFPHPVTLAGMLELSTAYLPVNNNWVKYFNESCQTFNDLNVE 155
D ATFEV Q PLFLER PHPVTLAGMLE+ +YLPVN NW +Y E+ T+ +L E
Sbjct: 382 DVWATFEVFQQQLPLFLERCPHPVTLAGMLEMGVSYLPVNQNWERYLTEAQNTYEELQRE 441
Query: 156 MKSLLMDKCDQACSLLHDDKYKDSLWLWDQDWSVXXXXXXXXXXXX--XSVDQETEEPEE 213
MK LMD + AC LL ++YK+ WLWD +W + S + E
Sbjct: 442 MKKSLMDLANDACQLLSGERYKEDPWLWDLEWDLQEFKQKKAKKVKKPASASKLPIEGAG 501
Query: 214 FYEINKNGEDQ---TEDEFVKRRRELVEKFKPLMQTKDRLPVNSSYLIGYPEWYRKLCVK 270
+ + ED +E+E ++R + + L T D LP +L G+P WYR+LC
Sbjct: 502 PFGDPMDQEDPGPPSEEEELQRSVTAHNRLQQLRSTTDLLPKRPQHLPGHPGWYRQLC-- 559
Query: 271 PHSADKDAVSKQELIHDGISDTSEAWIPGPSLISTSMQITPKLLSLTWKSMPLHFIRGHG 330
P D AW PGPSL+S M++TPKL++LTW PLH+ HG
Sbjct: 560 PRLDDP------------------AWAPGPSLLSLQMRVTPKLMALTWDGFPLHYSDSHG 601
Query: 331 WGYLVPYSTD 340
WGYLVP D
Sbjct: 602 WGYLVPGRRD 611
Score = 278 (102.9 bits), Expect = 1.6e-156, Sum P(2) = 1.6e-156
Identities = 51/90 (56%), Positives = 66/90 (73%)
Query: 6 WTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLATFEV 65
W ++SS N+L++V+ LY G L+K R +FV+GS+ DI N+ +LM YCA+D ATFEV
Sbjct: 330 WMDISSANNLADVHNLYVGGPPLEKEPRELFVKGSMRDIRENFQDLMQYCARDVWATFEV 389
Query: 66 IQALFPLFLERFPHPVTLAGMLELSTAYLP 95
Q PLFLER PHPVTLAGMLE+ +YLP
Sbjct: 390 FQQQLPLFLERCPHPVTLAGMLEMGVSYLP 419
>RGD|620057 [details] [associations]
symbol:Polg "polymerase (DNA directed), gamma" species:10116
"Rattus norvegicus" [GO:0002020 "protease binding"
evidence=IEA;ISO] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=ISO;ISS] [GO:0003887
"DNA-directed DNA polymerase activity" evidence=IEA;ISO;IDA]
[GO:0004527 "exonuclease activity" evidence=IEA;ISO] [GO:0005739
"mitochondrion" evidence=ISO;IDA] [GO:0005743 "mitochondrial inner
membrane" evidence=IEA;ISO] [GO:0005760 "gamma DNA polymerase
complex" evidence=IEA;IDA] [GO:0006261 "DNA-dependent DNA
replication" evidence=IEA] [GO:0006264 "mitochondrial DNA
replication" evidence=IEA;ISO] [GO:0006287 "base-excision repair,
gap-filling" evidence=IEA;ISO] [GO:0007568 "aging"
evidence=IEA;ISO] [GO:0042645 "mitochondrial nucleoid"
evidence=ISO;ISS] InterPro:IPR001098 InterPro:IPR002297
InterPro:IPR012337 InterPro:IPR016265 InterPro:IPR019760
Pfam:PF00476 PIRSF:PIRSF000797 PRINTS:PR00867 PROSITE:PS00447
SMART:SM00482 RGD:620057 GO:GO:0005743 GO:GO:0003677 GO:GO:0007568
GO:GO:0003682 GO:GO:0042645 GO:GO:0004527 SUPFAM:SSF53098
GO:GO:0003887 GO:GO:0005760 GO:GO:0006264 GO:GO:0006287
eggNOG:COG0749 HOGENOM:HOG000176668 HOVERGEN:HBG051400
OrthoDB:EOG4X0MRH PANTHER:PTHR10267 KO:K02332 CTD:5428
EMBL:AJ245646 EMBL:AJ245647 IPI:IPI00327963 RefSeq:NP_445980.1
UniGene:Rn.19327 ProteinModelPortal:Q9QYV8 STRING:Q9QYV8
PhosphoSite:Q9QYV8 PRIDE:Q9QYV8 GeneID:85472 KEGG:rno:85472
UCSC:RGD:620057 InParanoid:Q9QYV8 NextBio:617558
ArrayExpress:Q9QYV8 Genevestigator:Q9QYV8
GermOnline:ENSRNOG00000032293 Uniprot:Q9QYV8
Length = 1216
Score = 1273 (453.2 bits), Expect = 2.1e-156, Sum P(2) = 2.1e-156
Identities = 260/483 (53%), Positives = 332/483 (68%)
Query: 431 FIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAK--RIIEISRMLSYWRNNHERV 488
F KLPHKDG + NVG+P ++DF+ K D +L GA+ R +EI++M+S+WRN H+R+
Sbjct: 726 FFKLPHKDGNNYNVGSPFAKDFLPKMEDGTLQAGPGGARGPRALEINKMISFWRNAHKRI 785
Query: 489 KKQFVVWLNKKDLPRRLVENIE-SEGRDYGVILPQLIVSGTLTRRAVEATWMTASNAVGE 547
Q VVWL + LPR + + E YG ILPQ++ +GT+TRRAVE TW+TASNA +
Sbjct: 786 SSQMVVWLPRSALPRAVTRHPSFDEESHYGAILPQVVTAGTITRRAVEPTWLTASNARPD 845
Query: 548 RVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNA 607
RVGSEL+AM+QAP GY ++GADVDSQELWIA+V+GD++ A HG T GWMTL G+KS
Sbjct: 846 RVGSELKAMVQAPPGYVLVGADVDSQELWIAAVLGDAHFAGMHGCTAFGWMTLQGRKSRG 905
Query: 608 TDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTL 667
TD+HS TA VGISREHAK+ NY RIYGAG+ FAERLL QFN +S+ +A KA++MY +
Sbjct: 906 TDLHSKTAATVGISREHAKVFNYGRIYGAGQSFAERLLMQFNHRLSRQEAADKAQQMYAV 965
Query: 668 TKGKKLYRLKDGHLEELIKRV-----------YSKYEAREVC-SAYNTSVDK---IFDKP 712
TKG + YRL D E L+K++ S + R++ A S K + +
Sbjct: 966 TKGLRRYRLSDDG-EWLVKQLNVPVDRTEDGWVSLQDLRKIRREASRKSRWKKWEVVTER 1024
Query: 713 QWYGGTESAMFNRLEEIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAV 772
W GGTES MFN+LE IA S P TP L C +SRALEP S +F+ +R+NWVVQS AV
Sbjct: 1025 AWTGGTESEMFNKLESIAMSDTPRTPVLGCCISRALEP-SVVQGEFMTSRVNWVVQSSAV 1083
Query: 773 DFLHLMLVCMRWLVSR---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIK 829
D+LHLMLV M+WL D RF ISIHDE+RYLV +E++Y ALAL +TNLLTR
Sbjct: 1084 DYLHLMLVAMKWLFEEFAIDGRFCISIHDEVRYLVREEDRYRAALALQITNLLTRCMFAY 1143
Query: 830 KLDMTDIPLSISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDK 889
KL + D+P S++FFS V+ID+ LRKE DCKTPSNP G+ + YGIP GE LDIYQ I+
Sbjct: 1144 KLGLNDLPQSVAFFSAVDIDQCLRKEVTMDCKTPSNPTGMERKYGIPQGEALDIYQIIEL 1203
Query: 890 ANG 892
G
Sbjct: 1204 TKG 1206
Score = 1174 (418.3 bits), Expect = 6.0e-146, Sum P(2) = 6.0e-146
Identities = 265/626 (42%), Positives = 355/626 (56%)
Query: 96 DTLATFEVIQALFPLFLERFPHPVTLAGMLELSTAYLPVNNNWVKYFNESCQTFNDLNVE 155
D ATFEV Q PLFLER PHPVTLAGMLE+ +YLPVN NW +Y E+ T+ +L E
Sbjct: 381 DVWATFEVFQQQLPLFLERCPHPVTLAGMLEMGVSYLPVNQNWERYLTEAQSTYEELQRE 440
Query: 156 MKSLLMDKCDQACSLLHDDKYKDSLWLWDQDWSVXXXXXXXXXXX--XXSVDQETEEPEE 213
MK LM+ + AC LL ++YK+ WLWD +W + S + E
Sbjct: 441 MKKSLMELANDACQLLSGERYKEDPWLWDLEWDLQEFKQKKAKKVKKTASASKLPIEGAG 500
Query: 214 FYEINKNGEDQ---TEDEFVKRRRELVEKFKPLMQTKDRLPVNSSYLIGYPEWYRKLCVK 270
+ + ED +E+E +++ + + L T D LP +L G+P WYRKLC
Sbjct: 501 PFGDPMDQEDPGPPSEEEELQQNIMAHTRLQQLKSTTDLLPKRPQHLPGHPGWYRKLC-- 558
Query: 271 PHSADKDAVSKQELIHDGISDTSEAWIPGPSLISTSMQITPKLLSLTWKSMPLHFIRGHG 330
P D AW PGPSL+S M++TPKL++LTW PLH+ HG
Sbjct: 559 PRLDDP------------------AWTPGPSLLSLQMRVTPKLMALTWDGFPLHYSDSHG 600
Query: 331 WGYLVPYS----TDIKV-PDAENI----PLEQLKQLYNNIT----KQDNCEANVDNAQNS 377
WGYLVP T++ V P E+ P ++ LY KQ D A+
Sbjct: 601 WGYLVPGRRDNLTELPVSPTEESAAVTCPYRAIESLYRRHCLDQGKQQLETQETDLAEEF 660
Query: 378 L-RDSVE-TNISFIDCSKSAKRLEVIANVLDKKKLAEXX----XXXXXXXXXXXP-REIG 430
L DS + + C V ++ L + + P ++
Sbjct: 661 LLTDSAMWQTVEELGCLDVEAEATVESSGLSQPLVPPTACAPKTSQPTYHHGNGPYNDVD 720
Query: 431 -----FIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAK--RIIEISRMLSYWRN 483
F KLPHKDG + NVG+P ++DF+ K D +L GA+ R +EI++M+S+WRN
Sbjct: 721 IPGCWFFKLPHKDGNNYNVGSPFAKDFLPKMEDGTLQAGPGGARGPRALEINKMISFWRN 780
Query: 484 NHERVKKQFVVWLNKKDLPRRLVENIE-SEGRDYGVILPQLIVSGTLTRRAVEATWMTAS 542
H+R+ Q VVWL + LPR + + E YG ILPQ++ +GT+TRRAVE TW+TAS
Sbjct: 781 AHKRISSQMVVWLPRSALPRAVTRHPSFDEESHYGAILPQVVTAGTITRRAVEPTWLTAS 840
Query: 543 NAVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSG 602
NA +RVGSEL+AM+QAP GY ++GADVDSQELWIA+V+GD++ A HG T GWMTL G
Sbjct: 841 NARPDRVGSELKAMVQAPPGYVLVGADVDSQELWIAAVLGDAHFAGMHGCTAFGWMTLQG 900
Query: 603 QKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKAR 662
+KS TD+HS TA VGISREHAK+ NY RIYGAG+ FAERLL QFN +S+ +A KA+
Sbjct: 901 RKSRGTDLHSKTAATVGISREHAKVFNYGRIYGAGQSFAERLLMQFNHRLSRQEAADKAQ 960
Query: 663 KMYTLTKGKKLYRLKDGHLEELIKRV 688
+MY +TKG + YRL D E L+K++
Sbjct: 961 QMYAVTKGLRRYRLSDDG-EWLVKQL 985
Score = 273 (101.2 bits), Expect = 2.1e-156, Sum P(2) = 2.1e-156
Identities = 51/90 (56%), Positives = 65/90 (72%)
Query: 6 WTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLATFEV 65
W ++SS N+L++V+ LY G L K R +FV+GS+ DI N+ +LM YCA+D ATFEV
Sbjct: 329 WMDISSANNLADVHNLYVGGPRLAKEPRELFVKGSMRDIRENFQDLMEYCARDVWATFEV 388
Query: 66 IQALFPLFLERFPHPVTLAGMLELSTAYLP 95
Q PLFLER PHPVTLAGMLE+ +YLP
Sbjct: 389 FQQQLPLFLERCPHPVTLAGMLEMGVSYLP 418
>UNIPROTKB|Q91684 [details] [associations]
symbol:polg "DNA polymerase subunit gamma-1" species:8355
"Xenopus laevis" [GO:0003682 "chromatin binding" evidence=ISS]
[GO:0042645 "mitochondrial nucleoid" evidence=ISS]
InterPro:IPR001098 InterPro:IPR002297 InterPro:IPR016265
InterPro:IPR019760 Pfam:PF00476 PIRSF:PIRSF000797 PRINTS:PR00867
PROSITE:PS00447 SMART:SM00482 GO:GO:0003677 GO:GO:0003682
GO:GO:0006261 GO:GO:0042645 GO:GO:0003887 GO:GO:0005760
HOVERGEN:HBG051400 PANTHER:PTHR10267 KO:K02332 CTD:5428 EMBL:U49509
PIR:S68258 RefSeq:NP_001081464.1 UniGene:Xl.1071
ProteinModelPortal:Q91684 GeneID:397851 KEGG:xla:397851
Xenbase:XB-GENE-865213 Uniprot:Q91684
Length = 1200
Score = 1256 (447.2 bits), Expect = 4.4e-154, Sum P(2) = 4.4e-154
Identities = 256/483 (53%), Positives = 331/483 (68%)
Query: 431 FIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGV--DIGAKRIIEISRMLSYWRNNHERV 488
F KLPHKDG NVG+P ++DF+ K D +L D A R +EI++M+S+WRN H+R+
Sbjct: 719 FYKLPHKDGNANNVGSPFAKDFLPKMEDGTLQASTGDSSATRALEINKMISFWRNAHKRI 778
Query: 489 KKQFVVWLNKKDLPRRLVENIE-SEGRDYGVILPQLIVSGTLTRRAVEATWMTASNAVGE 547
Q VVW+ K +L R + + E E YG IL Q++ +GT+TRRAVE TW+TASNA +
Sbjct: 779 SSQMVVWMKKNELHRTITRDPEFDEENKYGAILAQVVSAGTITRRAVEPTWLTASNARAD 838
Query: 548 RVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNA 607
RVGSEL+AM+Q P GY +IGADVDSQELWIA+++G+++ A HG T GWMTL G+KS+
Sbjct: 839 RVGSELKAMVQVPPGYHLIGADVDSQELWIAAILGEAHFAGIHGCTAFGWMTLQGKKSSG 898
Query: 608 TDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTL 667
TD+HS TA VGISREHAK+ NY RIYGAG+ FAERLL QFN +++ A KA++MY +
Sbjct: 899 TDLHSKTASTVGISREHAKVFNYGRIYGAGQPFAERLLMQFNHRLTQEQAAEKAKQMYAV 958
Query: 668 TKGKKLYRL-KDGH--LEEL---IKR----VYSKYEAREVCS-AYNTSVDK--IFDKPQW 714
TKG + Y L K+G +EEL ++R + + R++ A S K + + W
Sbjct: 959 TKGIRRYILSKEGEWLVEELGISVERGEENSVNLQDLRKIQKDATKRSRRKWNLVSRRIW 1018
Query: 715 YGGTESAMFNRLEEIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDF 774
GGTES MFN+LE IA S P TP L CR+SRALEP + +FI +R+NWVVQS AVD+
Sbjct: 1019 TGGTESQMFNKLETIAMSPSPKTPVLGCRISRALEPTAVK-GEFITSRVNWVVQSSAVDY 1077
Query: 775 LHLMLVCMRWLVSR---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKL 831
LHLMLV M+WL D RF ISIHDE+RYLV +++Y ALAL +TNLLTR +L
Sbjct: 1078 LHLMLVAMKWLFEAYDIDGRFCISIHDEVRYLVHSKDRYRAALALQITNLLTRCMFASRL 1137
Query: 832 DMTDIPLSISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKAN 891
+ D+P S++FFS V+IDK LRKE DC TPSNP G+ K YGIP GE LDIYQ +
Sbjct: 1138 GIQDVPQSVAFFSAVDIDKCLRKEVTMDCSTPSNPNGMEKRYGIPQGEALDIYQILKVTK 1197
Query: 892 GVI 894
GV+
Sbjct: 1198 GVL 1200
Score = 1139 (406.0 bits), Expect = 1.0e-141, Sum P(2) = 1.0e-141
Identities = 270/655 (41%), Positives = 364/655 (55%)
Query: 96 DTLATFEVIQALFPLFLERFPHPVTLAGMLELSTAYLPVNNNWVKYFNESCQTFNDLNVE 155
D AT EV Q FPLF+ER PHPVTL+GMLE+ +YLPVN NW +Y +E+ ++ +L E
Sbjct: 373 DVQATHEVFQEQFPLFMERCPHPVTLSGMLEMGVSYLPVNQNWERYLDEAQTSYEELQKE 432
Query: 156 MKSLLMDKCDQACSLLHDDKYKDSLWLWDQDWSVXXXXXXXXXXXXXSVDQETEEPEEFY 215
MK LM + AC LL D YK+ WLWD +W + ++ E E
Sbjct: 433 MKKSLMKLANDACQLLTKDAYKEDPWLWDLEWDIQESKQKKTKISKKQ--KKANEAAESV 490
Query: 216 EINKNGEDQTED-----EFVKRRRELVEKF-KPL-MQTKDRLPVNSSYLIGYPEWYRKLC 268
NK ED ED E + R + + + + L ++T LP + +L G+P WYRKLC
Sbjct: 491 G-NKLVEDHNEDPGPPTEKEESRPSMGKLYLEDLKLKTLPLLPKRNQHLPGHPGWYRKLC 549
Query: 269 VKPHSADKDAVSKQELIHDGISDTSEAWIPGPSLISTSMQITPKLLSLTWKSMPLHFIRG 328
P D D W+PGP LIS M++TPKL+ LTW PLH+
Sbjct: 550 --PKLEDPD------------------WLPGPGLISLQMRLTPKLMRLTWDGYPLHYSEK 589
Query: 329 HGWGYLVPYSTDIKVPDAEN-----IPLEQLKQLYNNITK---QDNC--------EANVD 372
HGWGYLVP + K+ + E P ++ +Y +K +D C E +
Sbjct: 590 HGWGYLVPGRKNNKLNNEEEEEIIPCPYRAIEDIYAEYSKNKTKDGCLSQHSTIPEEFML 649
Query: 373 NAQNSLRDSVETNISFIDCSKSAKRLEVIANVLDKK---------KLAEXXXXXXXXXXX 423
NS+ VE +S + S+ EV A KK KL
Sbjct: 650 TDDNSMWQKVE-ELSRTEMDLSS---EVPATAKAKKRNNSSEHPVKLEMEFDSLPDNHHG 705
Query: 424 XXP-REIG-----FIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGV--DIGAKRIIEIS 475
P ++ F KLPHKDG NVG+P ++DF+ K D +L D A R +EI+
Sbjct: 706 NSPCGDVNVSGCWFYKLPHKDGNANNVGSPFAKDFLPKMEDGTLQASTGDSSATRALEIN 765
Query: 476 RMLSYWRNNHERVKKQFVVWLNKKDLPRRLVENIE-SEGRDYGVILPQLIVSGTLTRRAV 534
+M+S+WRN H+R+ Q VVW+ K +L R + + E E YG IL Q++ +GT+TRRAV
Sbjct: 766 KMISFWRNAHKRISSQMVVWMKKNELHRTITRDPEFDEENKYGAILAQVVSAGTITRRAV 825
Query: 535 EATWMTASNAVGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATP 594
E TW+TASNA +RVGSEL+AM+Q P GY +IGADVDSQELWIA+++G+++ A HG T
Sbjct: 826 EPTWLTASNARADRVGSELKAMVQVPPGYHLIGADVDSQELWIAAILGEAHFAGIHGCTA 885
Query: 595 LGWMTLSGQKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSK 654
GWMTL G+KS+ TD+HS TA VGISREHAK+ NY RIYGAG+ FAERLL QFN +++
Sbjct: 886 FGWMTLQGKKSSGTDLHSKTASTVGISREHAKVFNYGRIYGAGQPFAERLLMQFNHRLTQ 945
Query: 655 SDAKSKARKMYTLTKGKKLYRL-KDGHLEELIKRVYSKYEAREVCSAYNTSVDKI 708
A KA++MY +TKG + Y L K+G E L++ + E E S + KI
Sbjct: 946 EQAAEKAKQMYAVTKGIRRYILSKEG--EWLVEELGISVERGEENSVNLQDLRKI 998
Score = 268 (99.4 bits), Expect = 4.4e-154, Sum P(2) = 4.4e-154
Identities = 49/90 (54%), Positives = 64/90 (71%)
Query: 6 WTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLATFEV 65
W N+SS+N+L++V+ LY G L+K R +FV+GS+ DI + LM YCA D AT EV
Sbjct: 321 WVNISSINNLADVHALYVGGPPLEKEARELFVKGSMSDIRTEFQELMRYCALDVQATHEV 380
Query: 66 IQALFPLFLERFPHPVTLAGMLELSTAYLP 95
Q FPLF+ER PHPVTL+GMLE+ +YLP
Sbjct: 381 FQEQFPLFMERCPHPVTLSGMLEMGVSYLP 410
>UNIPROTKB|F1P0C5 [details] [associations]
symbol:POLG "DNA polymerase subunit gamma-1" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005760
"gamma DNA polymerase complex" evidence=IEA] [GO:0002020 "protease
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003887 "DNA-directed DNA polymerase activity"
evidence=IEA] [GO:0004527 "exonuclease activity" evidence=IEA]
[GO:0005743 "mitochondrial inner membrane" evidence=IEA]
[GO:0006264 "mitochondrial DNA replication" evidence=IEA]
[GO:0006287 "base-excision repair, gap-filling" evidence=IEA]
[GO:0007568 "aging" evidence=IEA] [GO:0042645 "mitochondrial
nucleoid" evidence=IEA] InterPro:IPR001098 InterPro:IPR002297
InterPro:IPR019760 Pfam:PF00476 PRINTS:PR00867 PROSITE:PS00447
SMART:SM00482 GO:GO:0005743 GO:GO:0003677 GO:GO:0007568
GO:GO:0003682 GO:GO:0042645 GO:GO:0004527 GO:GO:0003887
GO:GO:0005760 GO:GO:0006264 GO:GO:0006287 PANTHER:PTHR10267
GeneTree:ENSGT00390000000453 EMBL:AADN02041523 EMBL:AADN02041524
EMBL:AADN02041525 IPI:IPI00584551 Ensembl:ENSGALT00000038599
ArrayExpress:F1P0C5 Uniprot:F1P0C5
Length = 954
Score = 920 (328.9 bits), Expect = 2.7e-141, Sum P(3) = 2.7e-141
Identities = 191/377 (50%), Positives = 253/377 (67%)
Query: 431 FIKLPHK--DGEHLNVGNPLSRDFINKFSDNSLAGVDIG---AKRIIEISRMLSYWRNNH 485
F KLPHK DG NVG+P ++DF+ + D +L +G R +EI++M+S+WRN H
Sbjct: 465 FFKLPHKANDGNENNVGSPFAKDFLPRMEDGTLRAT-VGRTHGTRALEINKMVSFWRNAH 523
Query: 486 ERVKKQFVVWLNKKDLPRRLVEN-IESEGRDYGVILPQLIVSGTLTRRAVEATWMTASNA 544
+RV Q VVWL K +LPR + + SE DYG ILPQ++ +GT+TRRAVE TW+TASNA
Sbjct: 524 KRVSSQVVVWLKKGELPRAVTRHPAYSEEEDYGAILPQVVTAGTITRRAVEPTWLTASNA 583
Query: 545 VGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSG-Q 603
+ VG EL+AM+Q P GYS++GADVDSQELWIA+V+G+++ A HG T GWMTL
Sbjct: 584 RADSVGIELKAMVQVPPGYSLVGADVDSQELWIAAVLGEAHFAGMHGCTAFGWMTLRAWT 643
Query: 604 KSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARK 663
KS+ TD+HS TA VGISREHAK+ NY RIYGAG+ FAERLL QFN +++ A+ KA++
Sbjct: 644 KSDGTDLHSKTAATVGISREHAKVFNYGRIYGAGQPFAERLLMQFNHRLTQQQAREKAQQ 703
Query: 664 MYTLTKGKKLYRL-KDGH-LEELIKRVYSKYE-----AREVCSAYNTSVDKIFDKPQW-- 714
MY +TKG + + L ++G L + ++ K E A++V ++ K K +W
Sbjct: 704 MYAVTKGIRRFHLSEEGEWLVKELELAVDKAEDGTVSAQDVQKIQREAMRKSRRKKKWDV 763
Query: 715 ------YGGTESAMFNRLEEIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQ 768
GGTES MFN+LE IA S P TP L C +SRALEP +F+ +R+NWVVQ
Sbjct: 764 VAHRMWAGGTESEMFNKLESIALSASPQTPVLGCHISRALEPAVAK-GEFLTSRVNWVVQ 822
Query: 769 SGAVDFLHLMLVCMRWL 785
S AVD+LHLMLV M+WL
Sbjct: 823 SSAVDYLHLMLVSMKWL 839
Score = 529 (191.3 bits), Expect = 4.3e-91, Sum P(3) = 4.3e-91
Identities = 104/182 (57%), Positives = 128/182 (70%)
Query: 714 WYGGTESAMFNRLEEIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVD 773
W GGTES MFN+LE IA S P TP L C +SRALEP +F+ +R+NWVVQS AVD
Sbjct: 769 WAGGTESEMFNKLESIALSASPQTPVLGCHISRALEPAVAK-GEFLTSRVNWVVQSSAVD 827
Query: 774 FLHLMLVCMRWLVSR---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKK 830
+LHLMLV M+WL + RF ISIHDE+RYLV ++++Y ALAL +TNLLTR K
Sbjct: 828 YLHLMLVSMKWLFEEYDINGRFCISIHDEVRYLVQEQDRYRAALALQITNLLTRCMFAYK 887
Query: 831 LDMTDIPLSISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKA 890
L + D+P S++FFS V+ID+ LRKE +C TPSNP G+ K YGIP GE LDIYQ I+
Sbjct: 888 LGLQDLPQSVAFFSAVDIDRCLRKEVTMNCATPSNPTGMEKKYGIPRGEALDIYQIIEIT 947
Query: 891 NG 892
G
Sbjct: 948 KG 949
Score = 323 (118.8 bits), Expect = 2.7e-141, Sum P(3) = 2.7e-141
Identities = 71/183 (38%), Positives = 96/183 (52%)
Query: 88 ELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLAGMLELSTAYLPVNNNWVKYFNESCQ 147
EL + D AT+EV Q PLF+ER PHPVT AGMLE+ +YLPVN+NW +Y +++
Sbjct: 119 ELMSYCASDVRATYEVFQEQLPLFMERCPHPVTFAGMLEMGVSYLPVNSNWRRYLDDAQG 178
Query: 148 TFNDLNVEMKSLLMDKCDQACSLLHDDKYKDSLWLWDQDWSVXXXXXXXXXXXXXSVDQE 207
T+ +L EMK LM+ + AC LLH+D+YK+ WLWD + QE
Sbjct: 179 TYEELQKEMKKSLMNLANDACQLLHEDRYKEDPWLWDLEKKDQKINSEASETGSA---QE 235
Query: 208 TEEPEEFYE--INKNGEDQTEDEFVKRRRELVEKFKPLMQTKDRLPVNSSYLIGYPEWYR 265
E E ++ G E+E R E + L +T P +L G+P WYR
Sbjct: 236 WREGERLQPSVLSDPGPPSEEEEL--RAPESSTCLERLKETITLQPKRLQHLPGHPGWYR 293
Query: 266 KLC 268
KLC
Sbjct: 294 KLC 296
Score = 272 (100.8 bits), Expect = 6.4e-136, Sum P(3) = 6.4e-136
Identities = 48/90 (53%), Positives = 66/90 (73%)
Query: 6 WTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLATFEV 65
W +VSS+N+L++V+ LY G+ L K R +FV+G++ D+ NN+ LM+YCA D AT+EV
Sbjct: 75 WVHVSSINNLADVHALYVGGEPLQKEARELFVKGTMADVRNNFQELMSYCASDVRATYEV 134
Query: 66 IQALFPLFLERFPHPVTLAGMLELSTAYLP 95
Q PLF+ER PHPVT AGMLE+ +YLP
Sbjct: 135 FQEQLPLFMERCPHPVTFAGMLEMGVSYLP 164
Score = 175 (66.7 bits), Expect = 2.7e-141, Sum P(3) = 2.7e-141
Identities = 42/122 (34%), Positives = 63/122 (51%)
Query: 294 EAWIPGPSLISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTD-IKVPDAEN---- 348
E W+PGPSLIS M++TPKL+ L W PLH+ HGWGYLVP D + AE
Sbjct: 302 EGWVPGPSLISLQMRVTPKLMRLAWDGFPLHYSEKHGWGYLVPGRQDNLPAASAEPEGPV 361
Query: 349 IPLEQLKQLYNNITKQDNCEANVDNAQNSLRDSVETNISFIDCSKSAKRLEVIANV-LDK 407
P +++LY Q E + A VE + ++ S +++E ++ + LD
Sbjct: 362 CPHRAIERLYRQHCLQRGQEQPPEEA------GVEDELMVLEGSSMWQKVEELSQLELDM 415
Query: 408 KK 409
++
Sbjct: 416 ER 417
>CGD|CAL0004952 [details] [associations]
symbol:orf19.3431 species:5476 "Candida albicans" [GO:0005739
"mitochondrion" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0006264 "mitochondrial DNA replication"
evidence=IEA] [GO:0008408 "3'-5' exonuclease activity"
evidence=IEA] [GO:0003887 "DNA-directed DNA polymerase activity"
evidence=IEA] InterPro:IPR001098 InterPro:IPR002297
InterPro:IPR012337 InterPro:IPR016265 InterPro:IPR019760
Pfam:PF00476 PIRSF:PIRSF000797 PRINTS:PR00867 PROSITE:PS00447
SMART:SM00482 CGD:CAL0004952 GO:GO:0003677 GO:GO:0006261
SUPFAM:SSF53098 EMBL:AACQ01000064 EMBL:AACQ01000065 GO:GO:0003887
GO:GO:0005760 eggNOG:COG0749 PANTHER:PTHR10267 KO:K02332
RefSeq:XP_716679.1 RefSeq:XP_716738.1 STRING:Q5A4L0 GeneID:3641653
GeneID:3641675 KEGG:cal:CaO19.10935 KEGG:cal:CaO19.3431
Uniprot:Q5A4L0
Length = 1228
Score = 582 (209.9 bits), Expect = 1.8e-118, Sum P(5) = 1.8e-118
Identities = 121/277 (43%), Positives = 168/277 (60%)
Query: 401 IANVLDKK----KLAEXXXXXXXXXXXXXPREIGFIKLPHKDGEHLNVGNPLSRDFINKF 456
IA + +KK KL E + K+PH +G + LS+ ++ F
Sbjct: 595 IARLTEKKYVQPKLTEEELMETRDALLTKGKSYVLFKVPHPNGPSSRCTHILSKLYVRNF 654
Query: 457 SDNSLAGVDIGAKRIIEISRMLSYWRNNHERVKKQFVVWLNKKDLPRRLVENIES--EGR 514
D +L A +I+ ++ SYW N R+K QFVV+ N++ + + I+ E
Sbjct: 655 EDGTLTSEYDYATKILNLNNEASYWLGNRNRIKDQFVVY-NQQG-KNKFFDTIKKSKEHS 712
Query: 515 DYGVILPQLIVSGTLTRRAVEATWMTASNAVGERVGSELRAMIQAPDGYSIIGADVDSQE 574
G+I+P L GT+TRRA E TW+TASNA R+GSEL+++++AP GY +GADVDS+E
Sbjct: 713 SMGIIIPNLATMGTITRRATENTWLTASNAKKNRIGSELKSLVEAPKGYCFVGADVDSEE 772
Query: 575 LWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDMHSITAKAVGISREHAKIINYARIY 634
LWIAS++GDS + HG T LGWMTL G+KS TD+HS TA +GISR AK+ NY RIY
Sbjct: 773 LWIASLVGDSML-QIHGGTALGWMTLEGEKSQKTDLHSKTASILGISRNDAKVFNYGRIY 831
Query: 635 GAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKGK 671
GAG +FA RLLKQFN ++ +A AR++Y TKG+
Sbjct: 832 GAGVKFATRLLKQFNANITDEEADKVARQLYDSTKGR 868
Score = 413 (150.4 bits), Expect = 1.8e-118, Sum P(5) = 1.8e-118
Identities = 91/228 (39%), Positives = 139/228 (60%)
Query: 676 LKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQWYGGTESAMFNRLEEIATSLQP 735
+ D +++ +++Y + R S Y S +I+ YGGTES MFN LE IA +P
Sbjct: 849 ITDEEADKVARQLYDSTKGRTAVSKYLPS--RIY-----YGGTESIMFNALEAIAQQEEP 901
Query: 736 VTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLVCMRWLVSR---DTRF 792
TP L ++ AL + + ++++ +R+NW +QS VD+LHL+++ M +L+ + D R
Sbjct: 902 KTPVLGASITDALNVKNLNTNQYMTSRVNWTIQSSGVDYLHLLIISMEYLIEKYGIDARL 961
Query: 793 VISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIPLSISFFSGVEIDKVL 852
I++HDE+RYLV + +KY+ AL L ++N+ TRA ++L + ++P S +FFS V+ID VL
Sbjct: 962 AITVHDELRYLVKETDKYKAALLLQISNIWTRAMFCEQLGIKEVPQSCAFFSEVDIDHVL 1021
Query: 853 RKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKA-NGVIGTFKN 899
RKE DC TPSNP IPLGE L+I Q + K +G I KN
Sbjct: 1022 RKEVSMDCVTPSNPTP------IPLGESLNIGQLLSKCQHGDILADKN 1063
Score = 213 (80.0 bits), Expect = 1.8e-118, Sum P(5) = 1.8e-118
Identities = 56/164 (34%), Positives = 85/164 (51%)
Query: 1 MTDESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTL 60
+ ++ W + + NSL+ V + +C LDKTDR+ F + +N+ LM YCAKD
Sbjct: 362 VAEDPWLLMGAPNSLANVARFHCNIH-LDKTDRDYFATEDPNLVIDNFPKLMDYCAKDVD 420
Query: 61 ATFEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLF-LERFPHPV 119
ATFEV + LFP+F++R PHPV+ A + L T LP T + I+A L+ R
Sbjct: 421 ATFEVTKKLFPVFIQRIPHPVSFAALRLLGTLILPTTTKWPKYIEAAESLYESNRQEVAT 480
Query: 120 TLAGMLELSTAYLPVNNNWVKYFNESCQTFNDLNVEMKSLLMDK 163
TL + A++ N VK E+ + LN ++K + K
Sbjct: 481 TLQQLANDLVAHIQ-NKKQVKPDYENDPWLSQLNWKLKETRLKK 523
Score = 149 (57.5 bits), Expect = 5.0e-108, Sum P(4) = 5.0e-108
Identities = 37/143 (25%), Positives = 61/143 (42%)
Query: 96 DTLATFEVIQALFPLFLERFPHPVTLAGMLELSTAYLPVNNNWVKYFNESCQTFNDLNVE 155
D ATFEV + LFP+F++R PHPV+ A + L T LP W KY + + E
Sbjct: 418 DVDATFEVTKKLFPVFIQRIPHPVSFAALRLLGTLILPTTTKWPKYIEAAESLYESNRQE 477
Query: 156 MKSLLMDKCDQACSLLHDDK-----YKDSLWLWDQDWSVXXXXXXXXXXXXXSVDQETEE 210
+ + L + + + + K Y++ WL +W + T
Sbjct: 478 VATTLQQLANDLVAHIQNKKQVKPDYENDPWLSQLNWKLKETRLKKDGTPYKKTAYMTGY 537
Query: 211 PEEFYEINKNGEDQTEDEFVKRR 233
PE + E+ K + + + +K R
Sbjct: 538 PEWYRELFKTSKGEEMNLTLKTR 560
Score = 83 (34.3 bits), Expect = 1.8e-118, Sum P(5) = 1.8e-118
Identities = 14/41 (34%), Positives = 24/41 (58%)
Query: 303 ISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTDIKV 343
++ +ITP LL L W+ PL ++ GW + VP+ D ++
Sbjct: 555 LTLKTRITPLLLRLKWEGHPLFWVDSQGWCFKVPFDDDNEI 595
Score = 72 (30.4 bits), Expect = 1.8e-118, Sum P(5) = 1.8e-118
Identities = 14/30 (46%), Positives = 18/30 (60%)
Query: 239 KFKPLMQTKDRLPVN-SSYLIGYPEWYRKL 267
K K KD P ++Y+ GYPEWYR+L
Sbjct: 515 KLKETRLKKDGTPYKKTAYMTGYPEWYREL 544
Score = 38 (18.4 bits), Expect = 2.1e-79, Sum P(5) = 2.1e-79
Identities = 6/13 (46%), Positives = 9/13 (69%)
Query: 701 YNTSVDKIFDKPQ 713
YN ++F+KPQ
Sbjct: 1214 YNNRKKRLFEKPQ 1226
>UNIPROTKB|Q92076 [details] [associations]
symbol:POLG "DNA polymerase subunit gamma-1" species:9031
"Gallus gallus" [GO:0005760 "gamma DNA polymerase complex"
evidence=IEA] [GO:0003887 "DNA-directed DNA polymerase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006260
"DNA replication" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=ISS] [GO:0042645 "mitochondrial nucleoid" evidence=ISS]
[GO:0006298 "mismatch repair" evidence=IDA] [GO:0000731 "DNA
synthesis involved in DNA repair" evidence=IDA] InterPro:IPR001098
InterPro:IPR002297 InterPro:IPR019760 Pfam:PF00476 PRINTS:PR00867
PROSITE:PS00447 SMART:SM00482 GO:GO:0003677 GO:GO:0006260
GO:GO:0003682 GO:GO:0006298 GO:GO:0042645 GO:GO:0000731
GO:GO:0003887 GO:GO:0005760 EMBL:U60297 IPI:IPI00812609
UniGene:Gga.2135 ProteinModelPortal:Q92076 STRING:Q92076
eggNOG:COG0749 HOGENOM:HOG000176668 HOVERGEN:HBG051400
InParanoid:Q92076 OrthoDB:EOG4X0MRH PANTHER:PTHR10267
Uniprot:Q92076
Length = 647
Score = 961 (343.3 bits), Expect = 4.3e-113, Sum P(2) = 4.3e-113
Identities = 194/374 (51%), Positives = 257/374 (68%)
Query: 431 FIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIG---AKRIIEISRMLSYWRNNHER 487
F KLPHKDG NVG+P ++DF+ + D +L +G R +EI++M+S+WRN H+R
Sbjct: 161 FFKLPHKDGNENNVGSPFAKDFLPRMEDGTLRAA-VGRTHGTRALEINKMVSFWRNAHKR 219
Query: 488 VKKQFVVWLNKKDLPRRLVEN-IESEGRDYGVILPQLIVSGTLTRRAVEATWMTASNAVG 546
V Q VVWL K +LPR + + SE DYG ILPQ++ +GT+TRRAVE TW+TASNA
Sbjct: 220 VSSQVVVWLKKGELPRAVTRHPAYSEEEDYGAILPQVVTAGTITRRAVEPTWLTASNARA 279
Query: 547 ERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSN 606
+RVGSEL+AM+Q P GYS++GADVDSQELWIA+V+G+++ A HG T GWMTL G+KS+
Sbjct: 280 DRVGSELKAMVQVPPGYSLVGADVDSQELWIAAVLGEAHFAGMHGCTAFGWMTLQGKKSD 339
Query: 607 ATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYT 666
TD+HS TA VGISREHAK+ NY RIYGAG+ FAERLL QFN +++ A+ KA++MY
Sbjct: 340 GTDLHSKTAATVGISREHAKVFNYGRIYGAGQPFAERLLMQFNHRLTQQQAREKAQQMYA 399
Query: 667 LTKGKKLYRL-KDGH-LEELIKRVYSKYE-----AREVCSAYNTSVDKIFDKPQW----- 714
+TKG + + L ++G L + ++ K E A++V ++ K K +W
Sbjct: 400 VTKGIRRFHLSEEGEWLVKELELAVDKAEDGTVSAQDVQKIQREAMRKSRRKKKWDVVAH 459
Query: 715 ---YGGTESAMFNRLEEIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGA 771
GGTES MFN+LE IA S P TP L C +SRALEP +F+ +R+NWVVQS A
Sbjct: 460 RMWAGGTESEMFNKLESIALSASPQTPVLGCHISRALEPAVAK-GEFLTSRVNWVVQSSA 518
Query: 772 VDFLHLMLVCMRWL 785
VD+LHLMLV M+WL
Sbjct: 519 VDYLHLMLVSMKWL 532
Score = 529 (191.3 bits), Expect = 3.4e-66, Sum P(2) = 3.4e-66
Identities = 104/182 (57%), Positives = 128/182 (70%)
Query: 714 WYGGTESAMFNRLEEIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVD 773
W GGTES MFN+LE IA S P TP L C +SRALEP +F+ +R+NWVVQS AVD
Sbjct: 462 WAGGTESEMFNKLESIALSASPQTPVLGCHISRALEPAVAK-GEFLTSRVNWVVQSSAVD 520
Query: 774 FLHLMLVCMRWLVSR---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKK 830
+LHLMLV M+WL + RF ISIHDE+RYLV ++++Y ALAL +TNLLTR K
Sbjct: 521 YLHLMLVSMKWLFEEYDINGRFCISIHDEVRYLVQEQDRYRAALALQITNLLTRCMFAYK 580
Query: 831 LDMTDIPLSISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKA 890
L + D+P S++FFS V+ID+ LRKE +C TPSNP G+ K YGIP GE LDIYQ I+
Sbjct: 581 LGLQDLPQSVAFFSAVDIDRCLRKEVTMNCATPSNPTGMEKKYGIPRGEALDIYQIIEIT 640
Query: 891 NG 892
G
Sbjct: 641 KG 642
Score = 175 (66.7 bits), Expect = 4.3e-113, Sum P(2) = 4.3e-113
Identities = 42/122 (34%), Positives = 63/122 (51%)
Query: 294 EAWIPGPSLISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTD-IKVPDAEN---- 348
E W+PGPSLIS M++TPKL+ L W PLH+ HGWGYLVP D + AE
Sbjct: 2 EGWVPGPSLISLQMRVTPKLMRLAWDGFPLHYSEKHGWGYLVPGRQDNLPAASAEPEGPV 61
Query: 349 IPLEQLKQLYNNITKQDNCEANVDNAQNSLRDSVETNISFIDCSKSAKRLEVIANV-LDK 407
P +++LY Q E + A VE + ++ S +++E ++ + LD
Sbjct: 62 CPHRAIERLYRQHCLQRGQEQPPEEA------GVEDELMVLEGSSMWQKVEELSQLELDM 115
Query: 408 KK 409
++
Sbjct: 116 ER 117
>ASPGD|ASPL0000055321 [details] [associations]
symbol:AN0040 species:162425 "Emericella nidulans"
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0003887 "DNA-directed
DNA polymerase activity" evidence=IEA] [GO:0008408 "3'-5'
exonuclease activity" evidence=IEA] [GO:0005760 "gamma DNA
polymerase complex" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0006264 "mitochondrial DNA replication"
evidence=IEA] InterPro:IPR001098 InterPro:IPR002297
InterPro:IPR012337 InterPro:IPR019760 Pfam:PF00476 PRINTS:PR00867
PROSITE:PS00447 SMART:SM00482 EMBL:BN001308 GO:GO:0003677
GO:GO:0006260 SUPFAM:SSF53098 GO:GO:0003887 GO:GO:0005760
eggNOG:COG0749 HOGENOM:HOG000176668 PANTHER:PTHR10267 KO:K02332
OMA:DIPGCWF OrthoDB:EOG4CZFQ1 EMBL:AACD01000002 RefSeq:XP_657644.1
STRING:Q5BHE0 EnsemblFungi:CADANIAT00002716 GeneID:2875816
KEGG:ani:AN0040.2 Uniprot:Q5BHE0
Length = 1134
Score = 588 (212.0 bits), Expect = 1.9e-111, Sum P(5) = 1.9e-111
Identities = 122/245 (49%), Positives = 163/245 (66%)
Query: 431 FIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEISRMLSYWRNNHERVKK 490
+ KLPHKDG +PL++ ++ F +L+ AK +E++ SYW + +R+
Sbjct: 579 YFKLPHKDGPTARCVSPLAKGYLQYFERGTLSSQYALAKEALEMNASCSYWISARDRIMG 638
Query: 491 QFVVWLNKKDLPRRLVENIESEGRDYGVILPQLIVSGTLTRRAVEATWMTASNAVGERVG 550
Q VV+ N D+ R + ++ + G ILPQ+I GT+TRRAVE TW+TASNA RVG
Sbjct: 639 QLVVYEN--DV-RPASPSSKNGDQKLGYILPQIIPMGTITRRAVENTWLTASNAKANRVG 695
Query: 551 SELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDM 610
SEL+AMI+AP GY+ +GADVDSQELWIAS+IGD+ + HG +G+MTL G K+ TDM
Sbjct: 696 SELKAMIKAPPGYAFVGADVDSQELWIASLIGDAQF-QLHGGNAIGFMTLEGSKAAGTDM 754
Query: 611 HSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKG 670
HS TAK +GISR AK+ NY RIYGAG +FA LL+QFNP MS+ + + A K+Y TKG
Sbjct: 755 HSRTAKILGISRNDAKVFNYGRIYGAGVKFAATLLRQFNPSMSERETQEVASKLYKETKG 814
Query: 671 KKLYR 675
K R
Sbjct: 815 AKTTR 819
Score = 409 (149.0 bits), Expect = 1.9e-111, Sum P(5) = 1.9e-111
Identities = 84/183 (45%), Positives = 119/183 (65%)
Query: 710 DKPQWYGGTESAMFNRLEEIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQS 769
D P W GGTES +FN+LEE A +P TP L ++ AL + F+ +RINW +QS
Sbjct: 824 DNPFWRGGTESFVFNKLEEFADQERPRTPVLGAGITEALMRRFINRGSFMTSRINWAIQS 883
Query: 770 GAVDFLHLMLVCMRWLVSR---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAF 826
VD+LH++++ M +L+ R R I++HDEIRYLV +++KY ALAL V+N+ TRA
Sbjct: 884 SGVDYLHMLIIAMDYLIRRFNIQARLAITVHDEIRYLVKEQDKYRAALALQVSNVWTRAM 943
Query: 827 CIKKLDMTDIPLSISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQT 886
+++ + D+P S ++FS V+ID VLRKE D DC TPS+P+ IP GE L+I Q
Sbjct: 944 FSQQVGINDLPQSCAYFSQVDIDHVLRKEVDMDCVTPSHPHK------IPHGESLNITQL 997
Query: 887 IDK 889
+DK
Sbjct: 998 LDK 1000
Score = 177 (67.4 bits), Expect = 1.9e-111, Sum P(5) = 1.9e-111
Identities = 42/116 (36%), Positives = 61/116 (52%)
Query: 74 LERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLAGMLELSTAYLP 133
LER P LA + EL D T V + +F FLE PHPV+ + LS+ LP
Sbjct: 357 LER---PQILAKLDELLDYCAADVAITHRVYKKVFLNFLETCPHPVSFGALRHLSSVILP 413
Query: 134 VNNNWVKYFNESCQTFNDLNVEMKSLLMDKCDQACSLLHD-DKYKDSLWLWDQDWS 188
VN W +Y + + T+N +++ L++ CD+A S+ D +KY + WL DWS
Sbjct: 414 VNQTWKEYLDNAESTYNQRLGDVQRRLVELCDEALSVKDDPEKYMNDPWLRQLDWS 469
Score = 162 (62.1 bits), Expect = 6.8e-110, Sum P(5) = 6.8e-110
Identities = 44/142 (30%), Positives = 66/142 (46%)
Query: 3 DESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLAT 62
+E W SS+NSL +V K +C+ +DK+ R+ F E I L+ YCA D T
Sbjct: 322 EELWVGRSSVNSLRDVAKFHCD-VTIDKSQRDYFGELERPQILAKLDELLDYCAADVAIT 380
Query: 63 FEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLA 122
V + +F FLE PHPV+ + LS+ LP E + + +R
Sbjct: 381 HRVYKKVFLNFLETCPHPVSFGALRHLSSVILPVNQTWKEYLDNAESTYNQRLGD--VQR 438
Query: 123 GMLELSTAYLPVNNNWVKYFNE 144
++EL L V ++ KY N+
Sbjct: 439 RLVELCDEALSVKDDPEKYMND 460
Score = 76 (31.8 bits), Expect = 1.9e-111, Sum P(5) = 1.9e-111
Identities = 22/70 (31%), Positives = 34/70 (48%)
Query: 303 ISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTDIKVPDAENIPLEQLKQLYNNIT 362
++ +I P LL L+W + PL + HGW + VP K EN P+ N+T
Sbjct: 513 LTVRTRIAPILLKLSWDTHPLIWSDKHGWTFKVPRD---KAHQYENQPVVAC-----NMT 564
Query: 363 KQDNCEANVD 372
++ N E + D
Sbjct: 565 EEKNPELHND 574
Score = 38 (18.4 bits), Expect = 1.9e-111, Sum P(5) = 1.9e-111
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 259 GYPEWYRKLCVKPHSAD 275
G P+WY+ L ++AD
Sbjct: 495 GMPQWYKDL-FSSNTAD 510
>SGD|S000005857 [details] [associations]
symbol:MIP1 "Mitochondrial DNA polymerase" species:4932
"Saccharomyces cerevisiae" [GO:0005739 "mitochondrion"
evidence=IEA;IDA] [GO:0003887 "DNA-directed DNA polymerase
activity" evidence=IEA;IDA] [GO:0008408 "3'-5' exonuclease
activity" evidence=IDA] [GO:0006264 "mitochondrial DNA replication"
evidence=IDA;IMP] [GO:0006261 "DNA-dependent DNA replication"
evidence=IEA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0005760 "gamma DNA polymerase complex" evidence=IEA]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0016779
"nucleotidyltransferase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001098 InterPro:IPR002297
InterPro:IPR012337 InterPro:IPR016265 InterPro:IPR019760
Pfam:PF00476 PIRSF:PIRSF000797 PRINTS:PR00867 PROSITE:PS00447
SMART:SM00482 SGD:S000005857 GO:GO:0005739 EMBL:BK006948
GO:GO:0003677 SUPFAM:SSF53098 GO:GO:0008408 GO:GO:0003887
GO:GO:0005760 GO:GO:0006264 eggNOG:COG0749 HOGENOM:HOG000176668
PANTHER:PTHR10267 GeneTree:ENSGT00390000000453 KO:K02332
OrthoDB:EOG4CZFQ1 EMBL:J05117 EMBL:Z49821 EMBL:Z75238 EMBL:U42227
PIR:S62062 RefSeq:NP_014975.2 ProteinModelPortal:P15801
IntAct:P15801 STRING:P15801 PaxDb:P15801 PeptideAtlas:P15801
EnsemblFungi:YOR330C GeneID:854508 KEGG:sce:YOR330C CYGD:YOR330c
OMA:ELPQNCA NextBio:976861 Genevestigator:P15801 GermOnline:YOR330C
Uniprot:P15801
Length = 1254
Score = 536 (193.7 bits), Expect = 1.7e-109, Sum P(4) = 1.7e-109
Identities = 109/244 (44%), Positives = 154/244 (63%)
Query: 433 KLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEISRMLSYWRNNHERVKKQF 492
K+PH +G N N L++ + + F L A + ++I+ SYW + ER++ QF
Sbjct: 553 KVPHPNGPTFNCTNLLTKSYNHFFEKGVLKSESELAHQALQINSSGSYWMSARERIQSQF 612
Query: 493 VV----WLNK-KDLPRRLVENIESEGRDYGVILPQLIVSGTLTRRAVEATWMTASNAVGE 547
VV + N+ + L + N E D +I+P+++ GT+TRRAVE W+TASNA
Sbjct: 613 VVPSCKFPNEFQSLSAKSSLNNEKTN-DLAIIIPKIVPMGTITRRAVENAWLTASNAKAN 671
Query: 548 RVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNA 607
R+GSEL+ ++AP GY +GADVDS+ELWIAS++GDS HG T +GWM L G K+
Sbjct: 672 RIGSELKTQVKAPPGYCFVGADVDSEELWIASLVGDSIF-NVHGGTAIGWMCLEGTKNEG 730
Query: 608 TDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTL 667
TD+H+ TA+ +G SR AKI NY RIYGAG +FA +LLK+FNP ++ + K A K+Y
Sbjct: 731 TDLHTKTAQILGCSRNEAKIFNYGRIYGAGAKFASQLLKRFNPSLTDEETKKIANKLYEN 790
Query: 668 TKGK 671
TKGK
Sbjct: 791 TKGK 794
Score = 416 (151.5 bits), Expect = 1.7e-109, Sum P(4) = 1.7e-109
Identities = 91/227 (40%), Positives = 137/227 (60%)
Query: 673 LYRLKDGHLEELIKRVYSK-YEAREVCSAYNTSVDKIFDKPQWYGGTESAMFNRLEEIAT 731
L R +E K++ +K YE + T K+F K WYGG+ES +FN+LE IA
Sbjct: 768 LKRFNPSLTDEETKKIANKLYENTKG----KTKRSKLFKK-FWYGGSESILFNKLESIAE 822
Query: 732 SLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLVCMRWLVSR--- 788
P TP L C ++ +L + + F+ +RINW +QS VD+LHL+ M +++ +
Sbjct: 823 QETPKTPVLGCGITYSLMKKNLRANSFLPSRINWAIQSSGVDYLHLLCCSMEYIIKKYNL 882
Query: 789 DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIPLSISFFSGVEI 848
+ R ISIHDEIR+LV +++KY A+AL ++N+ TRA +++ + ++P + +FFS V+I
Sbjct: 883 EARLCISIHDEIRFLVSEKDKYRAAMALQISNIWTRAMFCQQMGINELPQNCAFFSQVDI 942
Query: 849 DKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKANGVIG 895
D V+RKE + DC TPSN IP GE LDI Q +DK+N +G
Sbjct: 943 DSVIRKEVNMDCITPSNKTA------IPHGEALDINQLLDKSNSKLG 983
Score = 223 (83.6 bits), Expect = 1.7e-109, Sum P(4) = 1.7e-109
Identities = 45/97 (46%), Positives = 60/97 (61%)
Query: 3 DESWTNVSSLNSLSEVYKLYCEGKV-LDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTLA 61
D+ W NVS+LNSL +V K +C K+ LDKTDR+ F I N+ L+ YCA D A
Sbjct: 293 DDPWLNVSALNSLKDVAKFHC--KIDLDKTDRDFFASTDKSTIIENFQKLVNYCATDVTA 350
Query: 62 TFEVIQALFPLFLERFPHPVTLAGMLELSTAYLPDTL 98
T +V +FP+FL++ PHPV+ AG+ LS LP L
Sbjct: 351 TSQVFDEIFPVFLKKCPHPVSFAGLKSLSKCILPTKL 387
Score = 155 (59.6 bits), Expect = 3.2e-103, Sum P(5) = 3.2e-103
Identities = 45/165 (27%), Positives = 71/165 (43%)
Query: 30 KTDRNIFVEGSLEDIENNWHNLMTYCAKDTLATFEVIQALFPL---FLERFPHPVTLAGM 86
+ + + E S+ED ++ W N+ + +A F L F +
Sbjct: 278 EVESEVHPEISIEDYDDPWLNVSALNSLKDVAKFHCKIDLDKTDRDFFASTDKSTIIENF 337
Query: 87 LELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLAGMLELSTAYLPVN-NNWVKYFNES 145
+L D AT +V +FP+FL++ PHPV+ AG+ LS LP N+W Y N S
Sbjct: 338 QKLVNYCATDVTATSQVFDEIFPVFLKKCPHPVSFAGLKSLSKCILPTKLNDWNDYLNSS 397
Query: 146 CQTFNDLNVEMKSLLMDKCDQACSLLHD--DKYKDSLWLWDQDWS 188
+ V+++S ++ LL D D Y WL DW+
Sbjct: 398 ESLYQQSKVQIESKIVQIIKDIV-LLKDKPDFYLKDPWLSQLDWT 441
Score = 78 (32.5 bits), Expect = 1.7e-109, Sum P(4) = 1.7e-109
Identities = 16/45 (35%), Positives = 22/45 (48%)
Query: 241 KPLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELI 285
KPL TK +P L G+PEWYR+L + + K +I
Sbjct: 443 KPLRLTKKGVPAKCQKLPGFPEWYRQLFPSKDTVEPKITIKSRII 487
Score = 65 (27.9 bits), Expect = 4.0e-108, Sum P(4) = 4.0e-108
Identities = 14/49 (28%), Positives = 27/49 (55%)
Query: 303 ISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTDIKVPDAENIPL 351
I+ +I P L L+W++ P+ + + GW + VP+ ++ A+N L
Sbjct: 480 ITIKSRIIPILFKLSWENSPVIWSKESGWCFNVPHE-QVETYKAKNYVL 527
Score = 50 (22.7 bits), Expect = 4.0e-88, Sum P(4) = 4.0e-88
Identities = 13/40 (32%), Positives = 21/40 (52%)
Query: 322 PLHFIRGHGWGYLVPYSTDIKV--PDAENIPLEQLKQLYN 359
P ++R GW VP ++V PD E + + ++ LYN
Sbjct: 139 PAEWLRKPGWVKYVPGMAPVEVAYPDEELVVFD-VETLYN 177
Score = 47 (21.6 bits), Expect = 3.2e-103, Sum P(5) = 3.2e-103
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 3 DESWTNVSSLNSLSEVYKLYCEGKVLDKTDR 33
DE + + NS E YK +CE K + R
Sbjct: 110 DEHFQKIGRFNS--EPYKSFCEDKFTEMVAR 138
Score = 38 (18.4 bits), Expect = 4.9e-91, Sum P(5) = 4.9e-91
Identities = 15/48 (31%), Positives = 23/48 (47%)
Query: 85 GMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLAGMLELSTAYL 132
GM + AY + L F+V + L+ + +P TLA L + YL
Sbjct: 154 GMAPVEVAYPDEELVVFDV-ETLYNV--SDYP---TLATALSSTAWYL 195
>UNIPROTKB|F1P2H1 [details] [associations]
symbol:POLG "DNA polymerase" species:9031 "Gallus gallus"
[GO:0005760 "gamma DNA polymerase complex" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0003887 "DNA-directed DNA polymerase
activity" evidence=IEA] InterPro:IPR001098 InterPro:IPR002297
InterPro:IPR019760 Pfam:PF00476 PRINTS:PR00867 PROSITE:PS00447
SMART:SM00482 GO:GO:0003677 GO:GO:0006260 GO:GO:0003887
GO:GO:0005760 IPI:IPI00812609 PANTHER:PTHR10267
GeneTree:ENSGT00390000000453 EMBL:AADN02041523 EMBL:AADN02041524
EMBL:AADN02041525 Ensembl:ENSGALT00000010730 ArrayExpress:F1P2H1
Uniprot:F1P2H1
Length = 649
Score = 922 (329.6 bits), Expect = 5.6e-109, Sum P(2) = 5.6e-109
Identities = 190/376 (50%), Positives = 252/376 (67%)
Query: 431 FIKLPHK--DGEHLNVGNPLSRDFINKFSDNSLAGVDIG---AKRIIEISRMLSYWRNNH 485
F KLPHK DG NVG+P ++DF+ + D +L +G R +EI++M+S+WRN H
Sbjct: 161 FFKLPHKANDGNENNVGSPFAKDFLPRMEDGTLRAT-VGRTHGTRALEINKMVSFWRNAH 219
Query: 486 ERVKKQFVVWLNKKDLPRRLVEN-IESEGRDYGVILPQLIVSGTLTRRAVEATWMTASNA 544
+RV Q VVWL K +LPR + + SE DYG ILPQ++ +GT+TRRAVE TW+TASNA
Sbjct: 220 KRVSSQVVVWLKKGELPRAVTRHPAYSEEEDYGAILPQVVTAGTITRRAVEPTWLTASNA 279
Query: 545 VGERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQK 604
+ VG EL+AM+Q P GYS++GADVDSQELWIA+V+G+++ A HG T GWMTL
Sbjct: 280 RADSVGIELKAMVQVPPGYSLVGADVDSQELWIAAVLGEAHFAGMHGCTAFGWMTLRAWT 339
Query: 605 SNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKM 664
S+ TD+HS TA VGISREHAK+ NY RIYGAG+ FAERLL QFN +++ A+ KA++M
Sbjct: 340 SDGTDLHSKTAATVGISREHAKVFNYGRIYGAGQPFAERLLMQFNHRLTQQQAREKAQQM 399
Query: 665 YTLTKGKKLYRL-KDGH-LEELIKRVYSKYE-----AREVCSAYNTSVDKIFDKPQW--- 714
Y +TKG + + L ++G L + ++ K E A++V ++ K K +W
Sbjct: 400 YAVTKGIRRFHLSEEGEWLVKELELAVDKAEDGTVSAQDVQKIQREAMRKSRRKKKWDVV 459
Query: 715 -----YGGTESAMFNRLEEIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQS 769
GGTES MFN+LE IA S P TP L C +SRALEP +F+ +R+NWVVQS
Sbjct: 460 AHRMWAGGTESEMFNKLESIALSASPQTPVLGCHISRALEPAVAK-GEFLTSRVNWVVQS 518
Query: 770 GAVDFLHLMLVCMRWL 785
AVD+LHLMLV M+WL
Sbjct: 519 SAVDYLHLMLVSMKWL 534
Score = 529 (191.3 bits), Expect = 3.4e-66, Sum P(2) = 3.4e-66
Identities = 104/182 (57%), Positives = 128/182 (70%)
Query: 714 WYGGTESAMFNRLEEIATSLQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVD 773
W GGTES MFN+LE IA S P TP L C +SRALEP +F+ +R+NWVVQS AVD
Sbjct: 464 WAGGTESEMFNKLESIALSASPQTPVLGCHISRALEPAVAK-GEFLTSRVNWVVQSSAVD 522
Query: 774 FLHLMLVCMRWLVSR---DTRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKK 830
+LHLMLV M+WL + RF ISIHDE+RYLV ++++Y ALAL +TNLLTR K
Sbjct: 523 YLHLMLVSMKWLFEEYDINGRFCISIHDEVRYLVQEQDRYRAALALQITNLLTRCMFAYK 582
Query: 831 LDMTDIPLSISFFSGVEIDKVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDKA 890
L + D+P S++FFS V+ID+ LRKE +C TPSNP G+ K YGIP GE LDIYQ I+
Sbjct: 583 LGLQDLPQSVAFFSAVDIDRCLRKEVTMNCATPSNPTGMEKKYGIPRGEALDIYQIIEIT 642
Query: 891 NG 892
G
Sbjct: 643 KG 644
Score = 175 (66.7 bits), Expect = 5.6e-109, Sum P(2) = 5.6e-109
Identities = 42/122 (34%), Positives = 63/122 (51%)
Query: 294 EAWIPGPSLISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTD-IKVPDAEN---- 348
E W+PGPSLIS M++TPKL+ L W PLH+ HGWGYLVP D + AE
Sbjct: 2 EGWVPGPSLISLQMRVTPKLMRLAWDGFPLHYSEKHGWGYLVPGRQDNLPAASAEPEGPV 61
Query: 349 IPLEQLKQLYNNITKQDNCEANVDNAQNSLRDSVETNISFIDCSKSAKRLEVIANV-LDK 407
P +++LY Q E + A VE + ++ S +++E ++ + LD
Sbjct: 62 CPHRAIERLYRQHCLQRGQEQPPEEA------GVEDELMVLEGSSMWQKVEELSQLELDM 115
Query: 408 KK 409
++
Sbjct: 116 ER 117
>POMBASE|SPCC24B10.22 [details] [associations]
symbol:pog1 "mitochondrial DNA polymerase" species:4896
"Schizosaccharomyces pombe" [GO:0000002 "mitochondrial genome
maintenance" evidence=IMP] [GO:0003677 "DNA binding" evidence=ISS]
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=ISO]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0005760 "gamma DNA
polymerase complex" evidence=IEA] [GO:0006264 "mitochondrial DNA
replication" evidence=ISO] [GO:0007005 "mitochondrion organization"
evidence=IMP] InterPro:IPR001098 InterPro:IPR002297
InterPro:IPR012337 Pfam:PF00476 PRINTS:PR00867 PROSITE:PS00447
SMART:SM00482 PomBase:SPCC24B10.22 GO:GO:0005739 EMBL:CU329672
GenomeReviews:CU329672_GR GO:GO:0003677 SUPFAM:SSF53098
GO:GO:0003887 GO:GO:0005760 GO:GO:0006264 eggNOG:COG0749
HOGENOM:HOG000176668 PANTHER:PTHR10267 KO:K02332 OMA:DIPGCWF
EMBL:Z47976 PIR:JC4375 PIR:T50429 RefSeq:NP_588025.2
ProteinModelPortal:Q12704 STRING:Q12704 EnsemblFungi:SPCC24B10.22.1
GeneID:2539099 KEGG:spo:SPCC24B10.22 OrthoDB:EOG4CZFQ1
NextBio:20800271 GermOnline:SPCC24B10.22 Uniprot:Q12704
Length = 1018
Score = 586 (211.3 bits), Expect = 2.4e-106, Sum P(3) = 2.4e-106
Identities = 116/242 (47%), Positives = 161/242 (66%)
Query: 431 FIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAKRIIEISRMLSYWRNNHERVKK 490
F K+PHKDG G+PLS+ + F + L AK+ +E+S SYW + +R++
Sbjct: 549 FFKVPHKDGPEARCGSPLSKSYQRYFEEGILQSDYEVAKKALEMSASCSYWSSARDRIRS 608
Query: 491 QFVVWLNKKDLPRRLVENIESEGRDYGVILPQLIVSGTLTRRAVEATWMTASNAVGERVG 550
Q VVW KD + +++ +G+ILP +I GT+TRRAVE TW+TASN+ R+G
Sbjct: 609 QMVVW--DKDAELGVPSSVDG----FGIILPCIIPMGTVTRRAVENTWLTASNSKKNRLG 662
Query: 551 SELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKEHGATPLGWMTLSGQKSNATDM 610
SEL+AMI+APDGY+ +GADVDS+ELWI +++GDS + HGAT LG MTL G+KS TD+
Sbjct: 663 SELKAMIRAPDGYTFVGADVDSEELWIVALMGDSQF-RLHGATALGMMTLEGKKSEGTDL 721
Query: 611 HSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAKSKARKMYTLTKG 670
HS TA +G+SR+ AK+ NY R+YGAG + LL Q NP + ++AK A+K+Y TKG
Sbjct: 722 HSKTAAILGVSRDSAKVFNYGRLYGAGLKHTTLLLMQMNPTLKTAEAKELAKKLYASTKG 781
Query: 671 KK 672
K
Sbjct: 782 VK 783
Score = 386 (140.9 bits), Expect = 2.4e-106, Sum P(3) = 2.4e-106
Identities = 87/220 (39%), Positives = 132/220 (60%)
Query: 676 LKDGHLEELIKRVYSKYEAREVCSAYNTSVDKIFDKPQ---WYGGTESAMFNRLEEIATS 732
LK +EL K++Y+ + V S + + ++ P+ W GTES +FN+LE +A
Sbjct: 763 LKTAEAKELAKKLYAS--TKGVKSKMSKRLQEM-GLPKLTFWSQGTESFVFNKLEAMAQL 819
Query: 733 LQPVTPFLNCRLSRALEPVSEDDSKFIQTRINWVVQSGAVDFLHLMLVCMRWLVSR---D 789
P TP L+ +++AL + + F+ +R+NW +QS AVD+LHL+LV M L+ + +
Sbjct: 820 PSPRTPVLDAGITQALSSKNLSKNSFMTSRVNWAIQSSAVDYLHLLLVSMNHLIKKYYLE 879
Query: 790 TRFVISIHDEIRYLVPDEEKYETALALHVTNLLTRAFCIKKLDMTDIPLSISFFSGVEID 849
R +++HDE+RYL D++KY A AL V NL TRAF ++L + ++P S++FFS V+ID
Sbjct: 880 ARLSLTVHDEVRYLSSDKDKYRVAFALQVANLWTRAFFCQRLGINELPQSVAFFSSVDID 939
Query: 850 KVLRKESDNDCKTPSNPYGLCKGYGIPLGEILDIYQTIDK 889
VLRK+ DC TPSN IP GE L I ++K
Sbjct: 940 HVLRKDVKMDCVTPSNKVP------IPPGEELTIESVLEK 973
Score = 191 (72.3 bits), Expect = 2.4e-106, Sum P(3) = 2.4e-106
Identities = 40/95 (42%), Positives = 55/95 (57%)
Query: 1 MTDESWTNVSSLNSLSEVYKLYCEGKVLDKTDRNIFVEGSLEDIENNWHNLMTYCAKDTL 60
+ E W SS+NSL +V K +C LDK+ R+ F E I + L+TYCA DT
Sbjct: 299 LKQEPWLAHSSVNSLKDVAKFHCN-ITLDKSKRDDFASLEKEPILQKLNELITYCAHDTY 357
Query: 61 ATFEVIQALFPLFLERFPHPVTLAGMLELSTAYLP 95
+T +V + +FP FLE PHP T + ML L + +LP
Sbjct: 358 STHQVFKKVFPQFLEVCPHPATFSAMLSLGSVFLP 392
Score = 163 (62.4 bits), Expect = 2.1e-103, Sum P(3) = 2.1e-103
Identities = 38/111 (34%), Positives = 59/111 (53%)
Query: 80 PVTLAGMLELSTAYLPDTLATFEVIQALFPLFLERFPHPVTLAGMLELSTAYLPVNNNWV 139
P+ L + EL T DT +T +V + +FP FLE PHP T + ML L + +LPVN++W
Sbjct: 340 PI-LQKLNELITYCAHDTYSTHQVFKKVFPQFLEVCPHPATFSAMLSLGSVFLPVNHSWT 398
Query: 140 KYFNESCQTFNDLNVEMKSLLMDKCDQACSLLH--DDKYKDSLWLWDQDWS 188
+Y N + + + + L ++A L++ D KD WL DW+
Sbjct: 399 RYINGVEEQYQQMIQLVDQKLSQYAEKAKDLINTKDTVLKDP-WLRQLDWT 448
Score = 72 (30.4 bits), Expect = 1.7e-49, Sum P(3) = 1.7e-49
Identities = 52/205 (25%), Positives = 86/205 (41%)
Query: 220 NG-EDQTED--EFVKRR-RELVEKFKPLMQTKDRLPVNSSYLIGYPEW-----YRKLCVK 270
NG E+Q + + V ++ + EK K L+ TKD + + +L +W YRKL K
Sbjct: 402 NGVEEQYQQMIQLVDQKLSQYAEKAKDLINTKDTV-LKDPWLRQL-DWTPCNLYRKL--K 457
Query: 271 PHSADKDAVSKQELIHDGISDTSEAWIPGPSLISTSMQITPKLLSLTWKSMPLHFIRGHG 330
+ + V K T + ++I+ ++ P LL L WK PL + +G
Sbjct: 458 KATQEVPVVPKW--YKKAYCKTEKR-----AVITAKSRLAPILLRLKWKKHPLAWSDTYG 510
Query: 331 WGYLVPYSTDIKVP---DAENIPL---EQLKQLYNN-----ITKQDNCEANVDNA-QNSL 378
W + V ++ ++ D +P E K YNN + +D EA + S
Sbjct: 511 WVFSVERTSKDEIEMLLDQGLVPCSREEDTKLDYNNYIFFKVPHKDGPEARCGSPLSKSY 570
Query: 379 RDSVETNISFIDCSKSAKRLEVIAN 403
+ E I D + K LE+ A+
Sbjct: 571 QRYFEEGILQSDYEVAKKALEMSAS 595
>WB|WBGene00013258 [details] [associations]
symbol:polg-1 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003887 "DNA-directed
DNA polymerase activity" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0005760 "gamma DNA polymerase
complex" evidence=IEA] [GO:0006264 "mitochondrial DNA replication"
evidence=IMP] [GO:0007005 "mitochondrion organization"
evidence=IMP] [GO:0030421 "defecation" evidence=IMP] [GO:0008406
"gonad development" evidence=IMP] [GO:0008340 "determination of
adult lifespan" evidence=IMP] InterPro:IPR001098 InterPro:IPR002297
InterPro:IPR012337 InterPro:IPR019760 Pfam:PF00476 PRINTS:PR00867
PROSITE:PS00447 SMART:SM00482 GO:GO:0008340 GO:GO:0008406
GO:GO:0003677 SUPFAM:SSF53098 GO:GO:0030421 GO:GO:0003887
GO:GO:0005760 GO:GO:0006264 eggNOG:COG0749 PANTHER:PTHR10267
GeneTree:ENSGT00390000000453 KO:K02332 OMA:DIPGCWF EMBL:AL117195
RefSeq:NP_496592.1 UniGene:Cel.13894 ProteinModelPortal:Q9U208
PaxDb:Q9U208 EnsemblMetazoa:Y57A10A.15 GeneID:174860
KEGG:cel:CELE_Y57A10A.15 UCSC:Y57A10A.15 CTD:174860
WormBase:Y57A10A.15 HOGENOM:HOG000022002 InParanoid:Q9U208
NextBio:885804 Uniprot:Q9U208
Length = 1072
Score = 395 (144.1 bits), Expect = 2.8e-75, Sum P(4) = 2.8e-75
Identities = 96/298 (32%), Positives = 161/298 (54%)
Query: 429 IGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGA--KRIIEISRMLSYWRNNHE 486
+ F +L H GE NVG+PL++ F + L +++ + +W + +
Sbjct: 553 VRFYQLDHPSGEG-NVGDPLTKHFAKDLKELVLRPTRYEEYFDVVLDSIQTTQFWTSYSD 611
Query: 487 RVKKQFVVWLNKKDLPRRLVENIESEGRDYGVILPQLIVSGTLTRRAVEATWMTASN-AV 545
R + +W + R EN+E G I ++ +GT++RR+V W+T +N +
Sbjct: 612 RYCSEVAIW--SPEATWRTAENLEMID---GAIAAAVVPAGTISRRSVHKLWVTLTNQST 666
Query: 546 GERVGSELRAMIQAPDGYSIIGADVDSQELWIASVIGDSYCAKE-------HGATPLGWM 598
G +G+ ++AM+QAP GY ++GADVDSQE W+A++ GD+ K G T M
Sbjct: 667 GHVIGTGIKAMVQAPAGYRLVGADVDSQEQWLAALYGDASAEKRLPLEKRVAGKTAFSNM 726
Query: 599 TLSGQKSNATDMHSITAKAVGISREHAKIINYARIYGAGERFAERLLKQFNPEMSKSDAK 658
L+G KS+ TD+HS+ A + ISR HAK++NYAR+YG+GE A + L + + +S+A+
Sbjct: 727 MLAGSKSDNTDLHSVVASQLKISRNHAKVLNYARLYGSGETHAGKHLMRVGG-LKQSEAE 785
Query: 659 SKARKMYTLTKGKKLYRLK-DGHLEELI-KRVYSKYEAREVCSAYNTSVDKIFDKPQW 714
S A +++ LTKG +K D + ++ K + E +VC ++D I+ P +
Sbjct: 786 STASQLFKLTKGDVAKYMKVDVRMNCVVDKYIEEMVENSDVCKIL--TIDGIYYMPAY 841
Score = 316 (116.3 bits), Expect = 2.8e-75, Sum P(4) = 2.8e-75
Identities = 70/166 (42%), Positives = 104/166 (62%)
Query: 710 DKPQ--WYGGTESAMFNRLEEIATSLQPVTPFLNCRLSRALEPVSED-------DSKFIQ 760
D+P+ + GG ES+ FN LE A + TP L C+++ +L + E D K+ +
Sbjct: 882 DEPRRLFVGGYESSTFNFLETSAAAHDLRTPILGCQIADSLGKLPEGTPDSAYFDRKYKR 941
Query: 761 TRINWVVQSGAVDFLHLMLVCMRWLVSR---DTRFVISIHDEIRYLVPDEEKYETALALH 817
+ +NW+VQS AVDFLHL+LV M+WL D RFVISIHDE+RY+ + + ALAL
Sbjct: 942 SVMNWIVQSSAVDFLHLLLVSMQWLCDTYKIDARFVISIHDEVRYMCKEPDAPRLALALQ 1001
Query: 818 VTNLLTRAFCIKKLDMTDIPLSISFFSGVEIDKVLRKESDNDCKTP 863
++NLL RA+ +++ + +P +++FFS V+ D VLRKE D + P
Sbjct: 1002 LSNLLVRAYISQRVGICQLPNTVAFFSQVDCDTVLRKEVDTESINP 1047
Score = 168 (64.2 bits), Expect = 2.8e-75, Sum P(4) = 2.8e-75
Identities = 37/97 (38%), Positives = 54/97 (55%)
Query: 5 SWTNVSSLNSLSEVYKLYCEGKVLD------KTDRNIFVEGSLEDIENNWHNLMTYCAKD 58
+W S NSL V+ K ++ KT R FV+ +E I ++ LM+YCA+D
Sbjct: 263 AWKGRVSKNSLVAVHDHLYPDKAINAEGFSKKTMRASFVKDPIEQIREDFQPLMSYCARD 322
Query: 59 TLATFEVIQALFPLFLERFPHPVTLAGMLELSTAYLP 95
+ E+ L+P F++RFPHP TL+GML + YLP
Sbjct: 323 NILCAEIYFRLWPEFIKRFPHPATLSGMLNMGNVYLP 359
Score = 164 (62.8 bits), Expect = 7.4e-75, Sum P(4) = 7.4e-75
Identities = 29/98 (29%), Positives = 50/98 (51%)
Query: 96 DTLATFEVIQALFPLFLERFPHPVTLAGMLELSTAYLPVNNNWVKYFNESCQTFNDLNVE 155
D + E+ L+P F++RFPHP TL+GML + YLP+N+ W ++ ++ QT
Sbjct: 322 DNILCAEIYFRLWPEFIKRFPHPATLSGMLNMGNVYLPINSYWKMFYEKNVQTCEQKKTA 381
Query: 156 MKSLLMDKCDQACSLLHDD-----KYKDSLWLWDQDWS 188
+++ L D+ K+ +W+W DW+
Sbjct: 382 ATRKIIESARLVAKRLDDEGEEIGPEKNDVWMWHHDWT 419
Score = 61 (26.5 bits), Expect = 2.8e-75, Sum P(4) = 2.8e-75
Identities = 11/34 (32%), Positives = 16/34 (47%)
Query: 303 ISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVP 336
I+ + P + + PL R GWG+LVP
Sbjct: 452 IALKSHLIPAIFGFVFGPFPLFKTRSKGWGFLVP 485
Score = 39 (18.8 bits), Expect = 7.8e-62, Sum P(4) = 7.8e-62
Identities = 15/67 (22%), Positives = 26/67 (38%)
Query: 228 EFVKRRRELVEKFKPLMQTKDRLPVNSSYLIGYPEWYRKLCVKPHSADKDAVSKQELIHD 287
EF+KR L LP+NS + + Y + + K +A + + L+
Sbjct: 336 EFIKRFPHPATLSGMLNMGNVYLPINSYWKMFYEKNVQTCEQKKTAATRKIIESARLVAK 395
Query: 288 GISDTSE 294
+ D E
Sbjct: 396 RLDDEGE 402
>UNIPROTKB|H0YD36 [details] [associations]
symbol:POLG "DNA polymerase subunit gamma-1" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003887
"DNA-directed DNA polymerase activity" evidence=IEA] [GO:0005760
"gamma DNA polymerase complex" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] InterPro:IPR001098 InterPro:IPR002297
Pfam:PF00476 PRINTS:PR00867 SMART:SM00482 GO:GO:0003677
GO:GO:0006260 GO:GO:0003887 GO:GO:0005760 PANTHER:PTHR10267
HGNC:HGNC:9179 EMBL:AC124068 Ensembl:ENST00000530292 Bgee:H0YD36
Uniprot:H0YD36
Length = 196
Score = 381 (139.2 bits), Expect = 3.3e-34, P = 3.3e-34
Identities = 92/189 (48%), Positives = 120/189 (63%)
Query: 652 MSKSDAKSKARKMYTLTKGKKLYRLKD-GH--LEEL---IKRV----YSKYEAREVC--S 699
+++ +A KA++MY TKG + YRL D G + EL + R S + R+V +
Sbjct: 1 LTQQEAAEKAQQMYAATKGLRWYRLSDEGEWLVRELNLPVDRTEGGWISLQDLRKVQRET 60
Query: 700 AYNTSVDK--IFDKPQWYGGTESAMFNRLEEIATSLQPVTPFLNCRLSRALEPVSEDDSK 757
A + K + + W GGTES MFN+LE IATS P TP L C +SRALEP S +
Sbjct: 61 ARKSQWKKWEVVAERAWKGGTESEMFNKLESIATSDIPRTPVLGCCISRALEP-SAVQEE 119
Query: 758 FIQTRINWVVQSGAVDFLHLMLVCMRWLVSR---DTRFVISIHDEIRYLVPDEEKYETAL 814
F+ +R+NWVVQS AVD+LHLMLV M+WL D RF ISIHDE+RYLV +E++Y AL
Sbjct: 120 FMTSRVNWVVQSSAVDYLHLMLVAMKWLFEEFAIDGRFCISIHDEVRYLVREEDRYRAAL 179
Query: 815 ALHVTNLLT 823
AL +TNLLT
Sbjct: 180 ALQITNLLT 188
>UNIPROTKB|H0YCV2 [details] [associations]
symbol:POLG "DNA polymerase subunit gamma-1" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003887
"DNA-directed DNA polymerase activity" evidence=IEA] [GO:0005760
"gamma DNA polymerase complex" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] InterPro:IPR001098 InterPro:IPR002297
Pfam:PF00476 GO:GO:0003677 GO:GO:0006260 GO:GO:0003887
GO:GO:0005760 PANTHER:PTHR10267 HGNC:HGNC:9179 EMBL:AC124068
Ensembl:ENST00000526314 Bgee:H0YCV2 Uniprot:H0YCV2
Length = 228
Score = 246 (91.7 bits), Expect = 2.3e-24, Sum P(2) = 2.3e-24
Identities = 64/199 (32%), Positives = 91/199 (45%)
Query: 295 AWIPGPSLISTSMQITPKLLSLTWKSMPLHFIRGHGWGYLVPYSTD--IKVPDAENIPLE 352
AW PGPSL+S M++TPKL++LTW PLH+ HGWGYLVP D K+P +
Sbjct: 40 AWTPGPSLLSLQMRVTPKLMALTWDGFPLHYSERHGWGYLVPGRRDNLAKLPTGTTLESA 99
Query: 353 QLKQLYNNITKQDNCEANVDNAQNSLRDSVETNISFIDCSKSAKRLEVIANVLDKKKL-A 411
+ Y I Q + F+ SA + LD ++ A
Sbjct: 100 GVVCPYRAIESLYRKHCLEQGKQQLMPQEAGLAEEFLLTDNSA--IWQTVEELDYLEVEA 157
Query: 412 EXXXXXXXXXXXXXPREIGFIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAK-- 469
E P + DG NVG+P ++DF+ K D +L GA
Sbjct: 158 EAKMENLRAAVPGQPLAL--------DGNSCNVGSPFAKDFLPKMEDGTLQAGPGGASGP 209
Query: 470 RIIEISRMLSYWRNNHERV 488
R +EI++M+S+WRN H+R+
Sbjct: 210 RALEINKMISFWRNAHKRI 228
Score = 70 (29.7 bits), Expect = 2.3e-24, Sum P(2) = 2.3e-24
Identities = 13/26 (50%), Positives = 16/26 (61%)
Query: 243 LMQTKDRLPVNSSYLIGYPEWYRKLC 268
L T + LP +L G+P WYRKLC
Sbjct: 8 LKGTTELLPKRPQHLPGHPGWYRKLC 33
>UNIPROTKB|H0YCD2 [details] [associations]
symbol:POLG "DNA polymerase subunit gamma-1" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003887
"DNA-directed DNA polymerase activity" evidence=IEA] [GO:0005760
"gamma DNA polymerase complex" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] InterPro:IPR001098 InterPro:IPR002297
Pfam:PF00476 GO:GO:0003677 GO:GO:0006260 GO:GO:0003887
GO:GO:0005760 PANTHER:PTHR10267 HGNC:HGNC:9179 EMBL:AC124068
Ensembl:ENST00000530715 Bgee:H0YCD2 Uniprot:H0YCD2
Length = 68
Score = 159 (61.0 bits), Expect = 2.1e-10, P = 2.1e-10
Identities = 29/60 (48%), Positives = 41/60 (68%)
Query: 431 FIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAK--RIIEISRMLSYWRNNHERV 488
F KLPHKDG NVG+P ++DF+ K D +L GA R +EI++M+S+WRN H+R+
Sbjct: 2 FFKLPHKDGNSCNVGSPFAKDFLPKMEDGTLQAGPGGASGPRALEINKMISFWRNAHKRI 61
>UNIPROTKB|H0YDF1 [details] [associations]
symbol:POLG "DNA polymerase subunit gamma-1" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003887
"DNA-directed DNA polymerase activity" evidence=IEA] [GO:0005760
"gamma DNA polymerase complex" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] InterPro:IPR001098 InterPro:IPR002297
Pfam:PF00476 GO:GO:0003677 GO:GO:0006260 GO:GO:0003887
GO:GO:0005760 PANTHER:PTHR10267 HGNC:HGNC:9179 EMBL:AC124068
Ensembl:ENST00000528881 Bgee:H0YDF1 Uniprot:H0YDF1
Length = 93
Score = 159 (61.0 bits), Expect = 2.1e-10, P = 2.1e-10
Identities = 29/60 (48%), Positives = 41/60 (68%)
Query: 431 FIKLPHKDGEHLNVGNPLSRDFINKFSDNSLAGVDIGAK--RIIEISRMLSYWRNNHERV 488
F KLPHKDG NVG+P ++DF+ K D +L GA R +EI++M+S+WRN H+R+
Sbjct: 30 FFKLPHKDGNSCNVGSPFAKDFLPKMEDGTLQAGPGGASGPRALEINKMISFWRNAHKRI 89
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.134 0.402 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 899 873 0.00085 122 3 11 22 0.41 34
37 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 21
No. of states in DFA: 637 (68 KB)
Total size of DFA: 471 KB (2219 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 79.35u 0.15s 79.50t Elapsed: 00:00:07
Total cpu time: 79.37u 0.15s 79.52t Elapsed: 00:00:07
Start: Thu Aug 15 16:56:41 2013 End: Thu Aug 15 16:56:48 2013