Query psy15892
Match_columns 80
No_of_seqs 19 out of 21
Neff 2.4
Searched_HMMs 13730
Date Sat Aug 17 00:18:56 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy15892.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/15892hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2oa5a1 d.362.1.1 (A:7-102) Un 34.7 14 0.001 22.9 2.7 22 53-74 3-24 (96)
2 d1tbga_ b.69.4.1 (A:) beta1-su 30.0 16 0.0012 21.0 2.3 19 53-71 3-21 (340)
3 d2h9da1 a.130.1.1 (A:1-94) Sal 17.6 48 0.0035 18.7 2.7 24 51-74 7-30 (94)
4 d1oaha_ a.138.1.3 (A:) Cytochr 17.1 54 0.0039 24.0 3.5 31 43-73 310-340 (482)
5 d2d8da1 a.130.1.1 (A:3-82) Cho 15.3 52 0.0038 17.8 2.4 21 54-74 3-23 (80)
6 d1gg2g_ a.137.3.1 (G:) Transdu 14.5 39 0.0028 18.3 1.6 14 54-67 2-15 (54)
7 d1ybza1 a.130.1.1 (A:2-75) mon 14.2 58 0.0042 17.7 2.4 22 53-74 2-23 (74)
8 d1ecma_ a.130.1.1 (A:) Chorism 14.1 61 0.0044 17.7 2.5 22 53-74 2-23 (91)
9 d1ttwa_ d.198.1.1 (A:) Putativ 13.4 24 0.0018 22.6 0.5 10 68-77 61-70 (118)
10 d1nlwa_ a.38.1.1 (A:) Mad prot 13.3 63 0.0046 17.4 2.3 21 55-75 50-70 (79)
No 1
>d2oa5a1 d.362.1.1 (A:7-102) Uncharacterized protein BQLF2 {Murid herpesvirus 4 [TaxId: 33708]}
Probab=34.68 E-value=14 Score=22.90 Aligned_cols=22 Identities=23% Similarity=0.279 Sum_probs=18.4
Q ss_pred chHHHHHHHHHhhchhHHHhhh
Q psy15892 53 ASDLYRQEVTQLKCDKLDLLRQ 74 (80)
Q Consensus 53 ~~e~L~~eV~rLk~dKldLLrQ 74 (80)
..|.|..|++||+.|-..|=||
T Consensus 3 t~EeLaaeL~rL~~ENk~LKkk 24 (96)
T d2oa5a1 3 TYEEMVKEVERLKLENKTLKQK 24 (96)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHHHHHHHH
Confidence 4689999999999998877554
No 2
>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}
Probab=29.95 E-value=16 Score=21.01 Aligned_cols=19 Identities=42% Similarity=0.356 Sum_probs=14.9
Q ss_pred chHHHHHHHHHhhchhHHH
Q psy15892 53 ASDLYRQEVTQLKCDKLDL 71 (80)
Q Consensus 53 ~~e~L~~eV~rLk~dKldL 71 (80)
+++.||+|+.+||....+.
T Consensus 3 ~~~~l~~~~~~l~~~~~~~ 21 (340)
T d1tbga_ 3 ELDQLRQEAEQLKNQIRDA 21 (340)
T ss_dssp THHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 5689999999998665553
No 3
>d2h9da1 a.130.1.1 (A:1-94) Salicylate biosynthesis protein PchB {Pseudomonas aeruginosa [TaxId: 287]}
Probab=17.57 E-value=48 Score=18.70 Aligned_cols=24 Identities=13% Similarity=0.187 Sum_probs=19.1
Q ss_pred CCchHHHHHHHHHhhchhHHHhhh
Q psy15892 51 GNASDLYRQEVTQLKCDKLDLLRQ 74 (80)
Q Consensus 51 ~~~~e~L~~eV~rLk~dKldLLrQ 74 (80)
...++.||++|..+-.+=++||.|
T Consensus 7 ~~~L~~lR~~ID~ID~~i~~LL~~ 30 (94)
T d2h9da1 7 CTGLADIREAIDRIDLDIVQALGR 30 (94)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHH
Confidence 346789999999888888888765
No 4
>d1oaha_ a.138.1.3 (A:) Cytochrome c nitrite reductase {Desulfovibrio desulfuricans [TaxId: 876]}
Probab=17.10 E-value=54 Score=23.99 Aligned_cols=31 Identities=23% Similarity=0.430 Sum_probs=26.7
Q ss_pred CCcccccCCCchHHHHHHHHHhhchhHHHhh
Q psy15892 43 KPCGLCMDGNASDLYRQEVTQLKCDKLDLLR 73 (80)
Q Consensus 43 ~~Cs~C~d~~~~e~L~~eV~rLk~dKldLLr 73 (80)
..|..|-.++..|.|++-|...|....++++
T Consensus 310 ~aC~~CH~d~s~e~l~~~v~~~q~~~~~~~~ 340 (482)
T d1oaha_ 310 RACRQCHADKTGEYLRQRVLYTQQKTFDQLL 340 (482)
T ss_dssp TTTTTTSTTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred chHhhcCCCcCHHHHHHHHHHHHHHHHHHHH
Confidence 5899999888889999999999988877765
No 5
>d2d8da1 a.130.1.1 (A:3-82) Chorismate mutase domain of P-protein {Thermus thermophilus [TaxId: 274]}
Probab=15.34 E-value=52 Score=17.75 Aligned_cols=21 Identities=29% Similarity=0.426 Sum_probs=15.3
Q ss_pred hHHHHHHHHHhhchhHHHhhh
Q psy15892 54 SDLYRQEVTQLKCDKLDLLRQ 74 (80)
Q Consensus 54 ~e~L~~eV~rLk~dKldLLrQ 74 (80)
++.||.+|.++-.+=++||.|
T Consensus 3 L~~lR~~ID~iD~~i~~Ll~~ 23 (80)
T d2d8da1 3 IQALRKEVDRVNREILRLLSE 23 (80)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 577888888777777777654
No 6
>d1gg2g_ a.137.3.1 (G:) Transducin (heterotrimeric G protein), gamma chain {Cow (Bos taurus) [TaxId: 9913]}
Probab=14.53 E-value=39 Score=18.28 Aligned_cols=14 Identities=36% Similarity=0.299 Sum_probs=9.4
Q ss_pred hHHHHHHHHHhhch
Q psy15892 54 SDLYRQEVTQLKCD 67 (80)
Q Consensus 54 ~e~L~~eV~rLk~d 67 (80)
++.++.+|+.||.+
T Consensus 2 i~q~rk~VeqLr~e 15 (54)
T d1gg2g_ 2 IAQARKLVEQLKME 15 (54)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 45677777777654
No 7
>d1ybza1 a.130.1.1 (A:2-75) mono-domain chorismate mutase {Pyrococcus furiosus [TaxId: 2261]}
Probab=14.20 E-value=58 Score=17.69 Aligned_cols=22 Identities=23% Similarity=0.504 Sum_probs=16.6
Q ss_pred chHHHHHHHHHhhchhHHHhhh
Q psy15892 53 ASDLYRQEVTQLKCDKLDLLRQ 74 (80)
Q Consensus 53 ~~e~L~~eV~rLk~dKldLLrQ 74 (80)
.++.||++|..+-.+=++||.+
T Consensus 2 ~L~~lR~~ID~iD~~i~~Ll~~ 23 (74)
T d1ybza1 2 TLKLLRKEIDKIDNQIISLLKK 23 (74)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHH
Confidence 3578888888887777777754
No 8
>d1ecma_ a.130.1.1 (A:) Chorismate mutase domain of P-protein {Escherichia coli [TaxId: 562]}
Probab=14.13 E-value=61 Score=17.74 Aligned_cols=22 Identities=23% Similarity=0.270 Sum_probs=15.5
Q ss_pred chHHHHHHHHHhhchhHHHhhh
Q psy15892 53 ASDLYRQEVTQLKCDKLDLLRQ 74 (80)
Q Consensus 53 ~~e~L~~eV~rLk~dKldLLrQ 74 (80)
.++.||.+|..+-.+=++||.+
T Consensus 2 ~L~~lR~~ID~iD~~i~~Ll~~ 23 (91)
T d1ecma_ 2 PLLALREKISALDEKLLALLAE 23 (91)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHH
Confidence 4577888888777766666654
No 9
>d1ttwa_ d.198.1.1 (A:) Putative YopH chaperone SycH {Yersinia pestis [TaxId: 632]}
Probab=13.42 E-value=24 Score=22.61 Aligned_cols=10 Identities=40% Similarity=0.710 Sum_probs=7.6
Q ss_pred hHHHhhhhcc
Q psy15892 68 KLDLLRQNVV 77 (80)
Q Consensus 68 KldLLrQNVs 77 (80)
-.+|||||+-
T Consensus 61 a~~lLrqNlF 70 (118)
T d1ttwa_ 61 LYDILRKNLF 70 (118)
T ss_dssp HHHHHHTCCC
T ss_pred HHHHHHHhcc
Confidence 3589999973
No 10
>d1nlwa_ a.38.1.1 (A:) Mad protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=13.33 E-value=63 Score=17.41 Aligned_cols=21 Identities=10% Similarity=-0.008 Sum_probs=13.3
Q ss_pred HHHHHHHHHhhchhHHHhhhh
Q psy15892 55 DLYRQEVTQLKCDKLDLLRQN 75 (80)
Q Consensus 55 e~L~~eV~rLk~dKldLLrQN 75 (80)
..|..++.+|..++-.|.++|
T Consensus 50 ~~L~~~~~~l~~~~~~L~~~~ 70 (79)
T d1nlwa_ 50 KKLEDSDRKAVHQIDQLQREQ 70 (79)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 556666666666666666554
Done!