Query psy15896
Match_columns 492
No_of_seqs 166 out of 1250
Neff 6.5
Searched_HMMs 46136
Date Sat Aug 17 00:23:03 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy15896.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/15896hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF00183 HSP90: Hsp90 protein; 100.0 3E-124 6E-129 1008.4 31.3 448 28-492 1-483 (531)
2 PTZ00272 heat shock protein 83 100.0 1E-122 2E-127 1015.8 42.7 484 1-492 152-656 (701)
3 PTZ00130 heat shock protein 90 100.0 2E-122 4E-127 1014.6 41.1 482 1-492 216-744 (814)
4 KOG0019|consensus 100.0 8E-123 2E-127 969.5 31.1 444 1-492 183-633 (656)
5 KOG0020|consensus 100.0 6E-122 1E-126 937.9 22.9 481 2-491 227-731 (785)
6 COG0326 HtpG Molecular chapero 100.0 5E-117 1E-121 943.2 38.1 450 1-492 156-610 (623)
7 PRK05218 heat shock protein 90 100.0 4E-105 1E-109 874.9 40.4 440 1-492 157-600 (613)
8 PRK14083 HSP90 family protein; 100.0 2E-100 3E-105 832.7 38.6 415 1-486 141-572 (601)
9 PF00183 HSP90: Hsp90 protein; 86.2 0.35 7.7E-06 53.4 1.6 33 54-86 86-118 (531)
10 PTZ00272 heat shock protein 83 77.9 1.8 3.9E-05 49.4 3.2 32 55-86 260-291 (701)
11 PTZ00130 heat shock protein 90 75.8 2.3 4.9E-05 49.2 3.3 32 55-86 320-351 (814)
12 COG0326 HtpG Molecular chapero 69.3 3.4 7.5E-05 46.2 2.7 32 54-85 221-252 (623)
13 PRK14083 HSP90 family protein; 61.8 5.2 0.00011 45.0 2.4 16 198-213 263-278 (601)
14 KOG0020|consensus 46.3 12 0.00026 40.8 1.9 28 55-82 331-358 (785)
15 KOG0019|consensus 38.9 56 0.0012 36.7 5.6 75 286-360 269-343 (656)
16 smart00481 POLIIIAc DNA polyme 37.2 45 0.00099 25.6 3.5 58 274-333 3-61 (67)
17 PF07429 Glyco_transf_56: 4-al 37.2 64 0.0014 34.0 5.5 69 284-359 252-337 (360)
18 PF06112 Herpes_capsid: Gammah 34.6 44 0.00095 30.7 3.4 36 445-480 16-62 (147)
19 COG3081 Nucleoid-associated pr 31.9 1E+02 0.0022 31.4 5.6 119 212-349 163-287 (335)
20 PF14204 Ribosomal_L18_c: Ribo 30.8 8 0.00017 33.0 -1.9 50 224-276 10-59 (94)
21 PTZ00069 60S ribosomal protein 30.6 65 0.0014 33.0 4.2 36 221-259 199-234 (300)
22 TIGR00585 mutl DNA mismatch re 28.4 2.9E+02 0.0064 28.2 8.7 44 12-55 139-194 (312)
23 PF08163 NUC194: NUC194 domain 26.2 20 0.00044 38.3 -0.3 24 182-205 303-326 (394)
24 COG1578 Uncharacterized conser 24.6 6.8E+02 0.015 25.6 10.0 59 215-273 73-133 (285)
25 PRK04081 hypothetical protein; 24.4 1.2E+02 0.0026 29.4 4.5 42 1-43 58-99 (207)
26 PF06523 DUF1106: Protein of u 24.0 33 0.00072 27.8 0.6 26 163-188 56-81 (91)
27 PF04122 CW_binding_2: Putativ 23.1 2.1E+02 0.0045 23.4 5.4 55 298-355 24-79 (92)
28 PF12170 DNA_pol3_tau_5: DNA p 22.2 78 0.0017 28.9 2.7 40 14-53 50-89 (142)
29 PRK05218 heat shock protein 90 21.9 44 0.00096 37.8 1.3 18 318-335 405-422 (613)
30 COG1480 Predicted membrane-ass 21.2 75 0.0016 36.2 2.8 18 443-460 468-486 (700)
No 1
>PF00183 HSP90: Hsp90 protein; InterPro: IPR001404 Molecular chaperones, or heat shock proteins (Hsps) are ubiquitous proteins that act to maintain proper protein folding within the cell []. They assist in the folding of nascent polypeptide chains, and are also involved in the re-folding of denatured proteins following proteotoxic stress. As their name implies, the heat shock proteins were first identified as proteins that were up-regulated under conditions of elevated temperature. However, subsequent studies have shown that increased Hsp expression is induced by a variety of cellular stresses, including oxidative stress and inflammation. Five major Hsp families have been determined, and are categorized according to their molecular size (Hsp100, Hsp90, Hsp70, Hsp60, and the small Hsps). Hsps are involved in a variety of cellular processes that are ATP-dependent. These include: prevention of protein aggregation, protein degradation, protein trafficking, and maintenance of signalling proteins in a conformation that permits activation. Hsp90 chaperones are unique in their ability to regulate a specific subset of cellular signalling proteins that have been implicated in disease processes, including intracellular protein kinases, steroid hormone receptors, and growth factor receptors [].; GO: 0005524 ATP binding, 0051082 unfolded protein binding, 0006457 protein folding, 0006950 response to stress; PDB: 3K99_D 2H55_A 3RLP_A 1OSF_A 3R4M_A 1YES_A 1UY9_A 3FT8_A 2YE2_A 2QF6_A ....
Probab=100.00 E-value=2.6e-124 Score=1008.42 Aligned_cols=448 Identities=37% Similarity=0.665 Sum_probs=362.8
Q ss_pred hhhCHHHHHHHHHHhcCcccccceecccccCCCCcccccCCCCCChHHHHHh----------------hhh--ccCC--C
Q psy15896 28 EFADEQTVLNVIRKYSNFVNSPIFVNDNQTNKIQPLWIMEPKSVKLEEHVEF----------------YRY--ISNS--N 87 (492)
Q Consensus 28 efl~~~~l~~li~kys~fi~~PI~l~~~~~n~~~~~w~~~~~~v~~~e~~~~----------------~~~--~~~~--~ 87 (492)
|||++++|++||+|||+||+|||+|+.++..+ .++++++..+. .++ .+++ +
T Consensus 1 eyl~~~klk~lvkkyS~Fi~~PI~l~~~k~~~---------~ev~~ee~~~~~~~~~~~~~~~~~~~~~e~~~~eee~~~ 71 (531)
T PF00183_consen 1 EYLEEYKLKELVKKYSQFISFPIYLWVEKEEE---------KEVPDEEEEEEEEEKEEEEKKEEEEEKVEEEDEEEEKEE 71 (531)
T ss_dssp GGGSHHHHHHHHHHHHTTSSSEEEEEEEEEEE---------CCCEHHHHHH---HTT-TT--------SSEEEE----S-
T ss_pred CcccHHHHHHHHHhhccccccceeEeeecccc---------ccCCcchhhhhhhhhhhcccccccccccccccccccccc
Confidence 69999999999999999999999998655432 23333332210 000 0011 1
Q ss_pred CCCc------ce--ecccCCCCCccccCCccCchhhHHHHHHHhhcCCCCCceeeeeeecCCcceEEEEEeeCCCCC-cc
Q psy15896 88 DQPR------FV--LHYRTGNLPLWIMEPKSVKLEEHVEFYRYISNSNDQPRFVLHYRTDAPLSIKSVLYFPETKPG-LF 158 (492)
Q Consensus 88 ~~~~------~~--~~~~n~~~piW~r~~~~vt~eey~~FYk~~~~~~~~pl~~~H~~~e~~~~~~~llyiP~~~p~-~~ 158 (492)
++++ .. |..+|+++|||+|+|++||+|||.+|||+++++|++||+|+||++|||++|+||||||+++|. +|
T Consensus 72 ~~~k~k~~~~~~~~~~~vN~~~piW~r~~~eit~eey~~Fyk~l~~~~~~Pl~~iH~~~eg~~~~~~lLyiP~~~p~~~~ 151 (531)
T PF00183_consen 72 KKPKTKKVKETVWEWEQVNTQKPIWTRDPKEITDEEYKEFYKSLSKDYDDPLFWIHFNAEGPFEFKSLLYIPKRAPFDLF 151 (531)
T ss_dssp TTEEEEECCEEEEEEEECS--S-GGGSSGGGS-HHHHHHHHHHHHTTSS-ESEEEEEEEESSSEEEEEEEEESS-SCCCC
T ss_pred ccccccccccceeecccccccCcccccchhccchHHHHHHHHHhhhcccCchhheeccccccceeeEEEEeCCCCchhhh
Confidence 1111 12 455999999999999999999999999999999999999999999999999999999999994 45
Q ss_pred cccccccCceEEEEeeEEeccccccccccccccccceecCCCCCCccchhhhcCCHHHHHHHHHHHHHHHHHHHHHhhhC
Q psy15896 159 EMSRETEVGVSLYTRRILIKAKAENILPKWLRFVKGVVDSEDIPLNLSRELLQNSPLINKLRNVLTTRILKFLQDRSKRD 238 (492)
Q Consensus 159 ~~~~~~~~~ikLYv~rVfI~d~~~~llP~~l~Fv~GVVDS~dLpLNvSRE~lQ~~~~l~~I~~~l~~ki~~~l~~la~~d 238 (492)
+.. ..+++|+||||||||||+|++|||+||+||||||||+|||||||||+||+|++|++|++.|++||+++|.++++ |
T Consensus 152 ~~~-~~~~~ikLY~rrVfI~d~~~~llP~~L~FvkGVVDS~DLPLNVSRE~LQ~~~~lk~I~~~l~kkvl~~l~~l~~-d 229 (531)
T PF00183_consen 152 END-KKKNGIKLYVRRVFITDNFEELLPEYLRFVKGVVDSDDLPLNVSRETLQQNKLLKKIRKKLVKKVLDMLKKLAK-D 229 (531)
T ss_dssp SSS-TT--SEEEEETTEEEESSCGGSS-GGGTT-EEEEEESSS-SSCTHHHHHTHHHHHHHHHHHHHHHHHHHHHHHT-S
T ss_pred hhh-hccccceeeeecccccchhhcccchhhheeeeeeeccccCCccchhhhhccHHHHHHHHHHHHHHHHHHHHHhh-h
Confidence 432 35789999999999999999999999999999999999999999999999999999999999999999999985 8
Q ss_pred HHHHHHHHHHhhhhhheeeccCcChhhHHHHhhhccceecccCCCceecHHHHHHHhcCCCccEEEEeCCCHhHHhcChH
Q psy15896 239 VENYLAFYKDYSLFIKEGIVTTQDVHEKEEIAKLLRYESSEQEAGTLITLPEYIEKLGEGQKDIYYLCAPSRALALSSPY 318 (492)
Q Consensus 239 ~e~y~~f~~~~~~~lK~G~~~~~D~~~~~~l~~llrF~ss~~~~~~~~sL~eYv~rmk~~Q~~IYY~~~~~~~~~~~sp~ 318 (492)
+++|.+||++||.+||+||++ |..||++|++||||+||+++ |+++||++|++||+++|+.|||++|+|++.+++|||
T Consensus 230 ~e~y~~f~~~~g~~iK~G~~e--D~~n~~kl~~LLrf~ss~~~-~~~~SL~eYv~rmke~Qk~IYY~~g~s~~~~~~SP~ 306 (531)
T PF00183_consen 230 REKYEKFWKEFGKFIKEGVIE--DFKNREKLAKLLRFESSKSE-GKLTSLDEYVERMKEGQKQIYYLTGESREEAEQSPY 306 (531)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH---GGGHHHHHTT-EEEETTTT-TSEEEHHHHHHTS-TT-SEEEEEESSSHHHHHTSGG
T ss_pred HHHHHHHHHHHhHHHHhHHhh--hhhhhhhcccceeeeccccc-cccccHHHhhhccccccccceEEecchHHHHhhccc
Confidence 999999999999999999996 89999999999999999865 689999999999999999999999999999999999
Q ss_pred HHHHhhCCcEEEEcCCcccHHHHHHhhhcCCCceeecccccccCcccccccCCCCCCCCCcchHHHHHHHHHHHhccceE
Q psy15896 319 LEALRERKVQVLFCYEPHDELILLQLRSFQNFNLTSVEKEMRQDKEEDKSGQILGPDSLPSSDADKLVSWIEEKMKNKVH 398 (492)
Q Consensus 319 le~~~~kg~eVl~l~d~iDe~~l~~l~~~~~~~~~~V~~~~~~~~~~~~~~~~~~~~~~~~~e~~~L~~~~k~~L~~~V~ 398 (492)
+|.|++||||||||++|||++||++|.+|+|++|++|++++++....+++.. ..+..++++++|++|+|++||++|.
T Consensus 307 lE~~k~kG~EVL~l~dpIDe~~i~~L~e~~gkkf~~I~ke~l~l~~~e~ek~---~~e~~~~~~~~L~~~~k~~L~~kV~ 383 (531)
T PF00183_consen 307 LEAFKKKGYEVLFLTDPIDEFVIQQLEEYEGKKFQSIDKEDLDLEEDEEEKK---EDEELKEEFKPLTEWLKELLGDKVE 383 (531)
T ss_dssp GHHHHHCT--EEEE-SHHHHHHHHHHSEETTEEEEETTBSSSSSSTSHHHHH---HHHHHHHHHHHHHHHHHHHHTTSCS
T ss_pred hhhHHhhCceEEEeCCchHHHHHHHHhhccccccccccccccccccchhhhh---hhhhhhhHHHHHHHHHHhhhhhhhh
Confidence 9999999999999999999999999999999999999999765332211110 0112456799999999999999999
Q ss_pred EEEEEeecCCccEEEeecchH---HHHHHHHHHhccCchhhhccCCCceEEEcCCCHHHHHHHhhcC--CChHHHHHHHH
Q psy15896 399 SVKITTKLDSHPCVVTVEEMA---AARHFLKTQSQNLNEEQRFSLLQPRLEINPKHPVIKKLASLSS--SNPALAELVVQ 473 (492)
Q Consensus 399 ~V~vS~rL~~sPa~iv~~e~~---~m~~~~k~~~~~~~~~~~~~~~k~iLEINp~HplI~~L~~l~~--~d~~~~~~~~~ 473 (492)
+|++|.||++|||||+++++| .|+|||++|+........++.+++||||||+||||++|+++.. .+++.++.+|+
T Consensus 384 ~V~vS~RL~~sPa~lv~~e~g~s~~Merimkaqa~~~~~~~~~~~~kkiLEINp~HPLIk~L~~~~~~d~~d~~~~~la~ 463 (531)
T PF00183_consen 384 KVKVSNRLVDSPAVLVSSEYGWSANMERIMKAQAMADMSMQEYMPSKKILEINPNHPLIKKLLKLVEKDEDDELAKDLAE 463 (531)
T ss_dssp EEEE-SSSSSSSEEEEE-SSSB-HHHHHHHHHHHCCSTTTSSTSC--EEEEE-TTSHHHHHHHHHHHCCTTHHHHHHHHH
T ss_pred eecccccccCCcceeecccchhHHHHHHHhhhhccccccccccccccceeecCCCCHHHHHHHhhhcccchhhHHHHHHH
Confidence 999999999999999999864 6999999987543333345567899999999999999999764 34567899999
Q ss_pred HHHHHHHHhcCC-CCCCCCC
Q psy15896 474 QLFSNAMVVAGL-VEDPRTI 492 (492)
Q Consensus 474 ~Lyd~AlL~~G~-~~dp~~~ 492 (492)
||||+|+|++|+ ++||++|
T Consensus 464 ~LyD~AlL~~G~~l~dp~~F 483 (531)
T PF00183_consen 464 QLYDTALLASGFELEDPAAF 483 (531)
T ss_dssp HHHHHHHHHTTSS-SSHHHH
T ss_pred HHhhhhhhhcCCCcccHHHH
Confidence 999999999998 8999754
No 2
>PTZ00272 heat shock protein 83 kDa (Hsp83); Provisional
Probab=100.00 E-value=1.1e-122 Score=1015.75 Aligned_cols=484 Identities=29% Similarity=0.535 Sum_probs=399.8
Q ss_pred CCceEEEecC--CCCCCcEEEEEeccchhhhhCHHHHHHHHHHhcCcccccceecccccCCCCcccc---cCCCCCChHH
Q psy15896 1 SGTYEITECP--TAEKGTKIVIHLKADCREFADEQTVLNVIRKYSNFVNSPIFVNDNQTNKIQPLWI---MEPKSVKLEE 75 (492)
Q Consensus 1 ~g~y~i~~~~--~~~~GT~I~L~lk~d~~efl~~~~l~~li~kys~fi~~PI~l~~~~~n~~~~~w~---~~~~~v~~~e 75 (492)
+|+|+|.+++ ..+|||+|+||||+|+.+|+++++|++||+|||+||+|||+++..........=. .+...-++.+
T Consensus 152 ~g~y~i~~~~~~~~~~GT~I~L~Lk~d~~ef~~~~~i~~li~kYs~fi~~PI~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (701)
T PTZ00272 152 GGTFTITSTPESDMKRGTRITLHLKEDQMEYLEPRRLKELIKKHSEFIGYDIELMVEKTTEKEVTDEDEEDTKKADEDGE 231 (701)
T ss_pred CCcEEEEeCCCCCCCCCCEEEEEECCchHHhccHHHHHHHHHHhccccCcceEEeeccccccccCcchhhhccccccccc
Confidence 4799999875 4589999999999999999999999999999999999999997433211000000 0000000000
Q ss_pred H---HHhhhhccCCCCCC----cc--eecccCCCCCccccCCccCchhhHHHHHHHhhcCCCCCceeeeeeecCCcceEE
Q psy15896 76 H---VEFYRYISNSNDQP----RF--VLHYRTGNLPLWIMEPKSVKLEEHVEFYRYISNSNDQPRFVLHYRTDAPLSIKS 146 (492)
Q Consensus 76 ~---~~~~~~~~~~~~~~----~~--~~~~~n~~~piW~r~~~~vt~eey~~FYk~~~~~~~~pl~~~H~~~e~~~~~~~ 146 (492)
. .+.++..+....++ +. .|..+|..+|||+|+|++||+|||.+|||+++++|++||+|+||++|||++|+|
T Consensus 232 ~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~iN~~~~lW~r~~~~i~~eey~~Fyk~~~~~~~~Pl~~ih~~~eg~~~~~~ 311 (701)
T PTZ00272 232 EPKVEEVKEGDEGKKKKTKKVKEVTKEYEVQNKHKPLWTRDPKDVTKEEYAAFYKAISNDWEDPAATKHFSVEGQLEFRS 311 (701)
T ss_pred ccccccccccccccccccccccccccchhhcccCcCCeecCcccCCHHHHHHHHHHhcCCcCCCceeeeeccCCceeeEE
Confidence 0 00000001111111 12 245699999999999999999999999999999999999999999999999999
Q ss_pred EEEeeCCCCC-cccccccccCceEEEEeeEEeccccccccccccccccceecCCCCCCccchhhhcCCHHHHHHHHHHHH
Q psy15896 147 VLYFPETKPG-LFEMSRETEVGVSLYTRRILIKAKAENILPKWLRFVKGVVDSEDIPLNLSRELLQNSPLINKLRNVLTT 225 (492)
Q Consensus 147 llyiP~~~p~-~~~~~~~~~~~ikLYv~rVfI~d~~~~llP~~l~Fv~GVVDS~dLpLNvSRE~lQ~~~~l~~I~~~l~~ 225 (492)
|||||+.+|. +|+. ...+++|+||||||||+|+|++|||+||+||||||||+|||||||||+||+|++|++||+.|++
T Consensus 312 llyiP~~~~~~~~~~-~~~~~~i~LY~~rVfI~d~~~~llP~~l~FvkGVVDS~DLpLNvSRE~LQ~~~~l~~i~~~i~~ 390 (701)
T PTZ00272 312 IMFVPKRAPFDMFEP-NKKRNNIKLYVRRVFIMDNCEDLCPDWLGFVKGVVDSEDLPLNISRENLQQNKILKVIRKNIVK 390 (701)
T ss_pred EEEeCCCCccchhhh-hhccCceEEEEeeEEEecchhhhhHHHHhheeEEeecCCCCCccCHHHHccCHHHHHHHHHHHH
Confidence 9999999994 3322 2257899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhCHHHHHHHHHHhhhhhheeeccCcChhhHHHHhhhccceecccCCCceecHHHHHHHhcCCCccEEEE
Q psy15896 226 RILKFLQDRSKRDVENYLAFYKDYSLFIKEGIVTTQDVHEKEEIAKLLRYESSEQEAGTLITLPEYIEKLGEGQKDIYYL 305 (492)
Q Consensus 226 ki~~~l~~la~~d~e~y~~f~~~~~~~lK~G~~~~~D~~~~~~l~~llrF~ss~~~~~~~~sL~eYv~rmk~~Q~~IYY~ 305 (492)
||+++|.++|+ ++++|.+||++||.+||+|+++ |+.||++|++||||+||.++ ++++||+||++|||++|+.|||+
T Consensus 391 ki~~~l~~la~-~~~~y~~f~~~~g~~lK~G~~~--D~~~~~~l~~Llrf~ss~~~-~~~~sL~eYv~rmk~~Q~~IYY~ 466 (701)
T PTZ00272 391 KCLEMFDEVAE-NKEDYKQFYEQFGKNIKLGIHE--DTANRKKLMELLRFYSTESG-EEMTTLKDYVTRMKAGQKSIYYI 466 (701)
T ss_pred HHHHHHHHHhh-CHHHHHHHHHHHhhhhheeecc--CHhHHHHHHHhhceeecCCC-CceeeHHHHHHhhccCCceEEEE
Confidence 99999999986 6899999999999999999996 88999999999999999753 67999999999999999999999
Q ss_pred eCCCHhHHhcChHHHHHhhCCcEEEEcCCcccHHHHHHhhhcCCCceeecccccccCcccccccCCCCCCCCCcchHHHH
Q psy15896 306 CAPSRALALSSPYLEALRERKVQVLFCYEPHDELILLQLRSFQNFNLTSVEKEMRQDKEEDKSGQILGPDSLPSSDADKL 385 (492)
Q Consensus 306 ~~~~~~~~~~sp~le~~~~kg~eVl~l~d~iDe~~l~~l~~~~~~~~~~V~~~~~~~~~~~~~~~~~~~~~~~~~e~~~L 385 (492)
+|+|++++++|||+|.|++||+|||||+||||||||++|.+|+|++|+||++++.+....++++. .. +..++++++|
T Consensus 467 ~~~s~~~~~~sP~lE~~~~kg~EVL~l~dpiDe~~i~~l~ey~~k~f~sV~~~~~~l~~~~~e~~--~~-~~~~~~~~~L 543 (701)
T PTZ00272 467 TGDSKKKLETSPFIEQARRRGLEVLFMTEPIDEYVMQQVKDFEDKKFACLTKEGVHFEESEEEKQ--QR-EEEKAACEKL 543 (701)
T ss_pred eCCCHHHHHhChHHHHHHhCCCeEEEeCCcHHHHHHHHHHhcCCCceEecccccccccccccchh--hh-hhhHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999998765322111110 11 1134579999
Q ss_pred HHHHHHHhccceEEEEEEeecCCccEEEeecchHH---HHHHHHHHhccCchhhhccCCCceEEEcCCCHHHHHHHhhc-
Q psy15896 386 VSWIEEKMKNKVHSVKITTKLDSHPCVVTVEEMAA---ARHFLKTQSQNLNEEQRFSLLQPRLEINPKHPVIKKLASLS- 461 (492)
Q Consensus 386 ~~~~k~~L~~~V~~V~vS~rL~~sPa~iv~~e~~~---m~~~~k~~~~~~~~~~~~~~~k~iLEINp~HplI~~L~~l~- 461 (492)
++|||++||++|.+|++|+||++||||||++++|+ |++||++|+++.+.+..++.+++||||||+||||++|+++.
T Consensus 544 ~~~~k~~L~~kV~~VkvS~RL~~sPa~lv~~e~g~s~~Merimkaq~~~~~~~~~~~~~kkiLEINP~HpiIk~L~~~~~ 623 (701)
T PTZ00272 544 CKTMKEVLGDKVEKVIVSERLSTSPCILVTSEFGWSAHMEQIMRNQALRDSSMAQYMMSKKTMELNPRHPIIKELRRRVG 623 (701)
T ss_pred HHHHHHHhCCcccEEEEeccCCCCCeEEEecccchhHHHHHHHHhcccccccccccccCCeEEEECCCCHHHHHHHHHhh
Confidence 99999999999999999999999999999999765 56666666532211222345789999999999999998753
Q ss_pred -CCChHHHHHHHHHHHHHHHHhcCC-CCCCCCC
Q psy15896 462 -SSNPALAELVVQQLFSNAMVVAGL-VEDPRTI 492 (492)
Q Consensus 462 -~~d~~~~~~~~~~Lyd~AlL~~G~-~~dp~~~ 492 (492)
..+++.++++|+||||+|+|++|+ ++||++|
T Consensus 624 ~~~~~~~~~~la~~LyD~AlL~~G~~leDp~~f 656 (701)
T PTZ00272 624 ADENDKAVKDLVFLLFDTSLLTSGFQLEDPTGY 656 (701)
T ss_pred cccchHHHHHHHHHHHHHHHHhCCCCccCHHHH
Confidence 334556899999999999999997 8999764
No 3
>PTZ00130 heat shock protein 90; Provisional
Probab=100.00 E-value=1.8e-122 Score=1014.62 Aligned_cols=482 Identities=25% Similarity=0.463 Sum_probs=402.1
Q ss_pred CCceEEEecC---CCCCCcEEEEEeccchhhhhCHHHHHHHHHHhcCcccccceecccccCCCCcccccCCCCCChHHHH
Q psy15896 1 SGTYEITECP---TAEKGTKIVIHLKADCREFADEQTVLNVIRKYSNFVNSPIFVNDNQTNKIQPLWIMEPKSVKLEEHV 77 (492)
Q Consensus 1 ~g~y~i~~~~---~~~~GT~I~L~lk~d~~efl~~~~l~~li~kys~fi~~PI~l~~~~~n~~~~~w~~~~~~v~~~e~~ 77 (492)
+|+|+|++++ +.+|||+|+||||+|+.+||++++|++||+|||+||+|||+|++++....... ...+.+ .+++-.
T Consensus 216 ~g~y~I~e~~~~~~~~rGT~I~LhLked~~efl~~~~ik~likkYS~fI~~PI~l~~~~~~~~~~~-~~~~~~-~~~~~~ 293 (814)
T PTZ00130 216 DAKFTIYKDPRGSTLKRGTRISLHLKEDATNLMNDKKLVDLISKYSQFIQYPIYLLHENVYTEEVL-ADIAKE-MENDPN 293 (814)
T ss_pred CCcEEEEECCCCCCCCCCcEEEEEECCchhhhccHHHHHHHHHHhhccCCCCEEEccccccccccc-cccccc-cccccc
Confidence 4899999964 45899999999999999999999999999999999999999986443221100 000000 000000
Q ss_pred -Hh--hhhccCCCCCCc------ceecccCCCCCccccCCccCchhhHHHHHHHhhcCCCCCceeeeeeecCCcceEEEE
Q psy15896 78 -EF--YRYISNSNDQPR------FVLHYRTGNLPLWIMEPKSVKLEEHVEFYRYISNSNDQPRFVLHYRTDAPLSIKSVL 148 (492)
Q Consensus 78 -~~--~~~~~~~~~~~~------~~~~~~n~~~piW~r~~~~vt~eey~~FYk~~~~~~~~pl~~~H~~~e~~~~~~~ll 148 (492)
+. .+..++++.+.+ ..|..+|.++|||+|+|++||+|||.+|||++++++++||+|+||++|||++|+|||
T Consensus 294 ~~~~e~~~~~~~~~k~k~v~~~~~~~e~vN~~~aiW~r~~~eit~EeY~eFYk~l~~~~~dPl~~iH~~~Eg~~~~~~LL 373 (814)
T PTZ00130 294 YDSVKVEETDDPNKKTRTVEKKVKKWKLMNEQKPIWLRPPKELTDEDYKKFFSVLSGFNDEPLYHIHFFAEGEIEFKCLI 373 (814)
T ss_pred cccccccccccccccccccccceeeeeeeccCCCcccCCcccCCHHHHHHHHHHhcCCccCCceeeeeccCCCeeEEEEE
Confidence 00 000000111111 234559999999999999999999999999999999999999999999999999999
Q ss_pred EeeCCCCCcccccccccCceEEEEeeEEeccccccccccccccccceecCCCCCCccchhhhcCCHHHHHHHHHHHHHHH
Q psy15896 149 YFPETKPGLFEMSRETEVGVSLYTRRILIKAKAENILPKWLRFVKGVVDSEDIPLNLSRELLQNSPLINKLRNVLTTRIL 228 (492)
Q Consensus 149 yiP~~~p~~~~~~~~~~~~ikLYv~rVfI~d~~~~llP~~l~Fv~GVVDS~dLpLNvSRE~lQ~~~~l~~I~~~l~~ki~ 228 (492)
|||+.+|..+......+++|+||||||||+|+|++|||+||+||||||||+|||||||||+||+|++|++||+.|++||+
T Consensus 374 YIP~~ap~~~~~~~~~~~~ikLYvrrVfI~d~~~dLLP~wL~FVkGVVDSeDLPLNVSRE~LQ~n~~l~~Irk~l~kkil 453 (814)
T PTZ00130 374 YIPSRAPSINDHLFTKQNSIKLYVRRVLVADEFVEFLPRYMSFVKGVVDSDDLPLNVSREQLQQNKILKAVSKRIVRKIL 453 (814)
T ss_pred EecCCCccchhhhhhccCceEEEEeeEEeecchhhhhhHHHhhhEEEeecCCCCCccCHHHHccCHHHHHHHHHHHHHHH
Confidence 99999996331112357999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhh-----------------------------hCHHHHHHHHHHhhhhhheeeccCcChhhHHHHhhhccceecc
Q psy15896 229 KFLQDRSK-----------------------------RDVENYLAFYKDYSLFIKEGIVTTQDVHEKEEIAKLLRYESSE 279 (492)
Q Consensus 229 ~~l~~la~-----------------------------~d~e~y~~f~~~~~~~lK~G~~~~~D~~~~~~l~~llrF~ss~ 279 (492)
++|.++++ ++|++|.+||++||.+||+|+++ |+.||++|++||||+||+
T Consensus 454 ~~L~~l~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~d~e~Y~kF~~~fg~~LK~Gv~e--D~~nre~l~~LLrF~Ss~ 531 (814)
T PTZ00130 454 DTFRTLYKEGKKNKETLRAELAKETDEEKKKEIQKKINEPSTYKLIYKEYRKYLKTGCYE--DDINRNKIVKLLLFKTML 531 (814)
T ss_pred HHHHHHHhhccccchhcccccccccccccccccccccccHHHHHHHHHHHHHHHHhHhhc--CHHHHHHHHHhheeeeCC
Confidence 99999987 67899999999999999999995 889999999999999997
Q ss_pred cCCCceecHHHHHHHhcCCCccEEEEeCCCHhHHhcChHHHHHhhCCcEEEEcCCcccHHHHHHhhhcCCCceeeccccc
Q psy15896 280 QEAGTLITLPEYIEKLGEGQKDIYYLCAPSRALALSSPYLEALRERKVQVLFCYEPHDELILLQLRSFQNFNLTSVEKEM 359 (492)
Q Consensus 280 ~~~~~~~sL~eYv~rmk~~Q~~IYY~~~~~~~~~~~sp~le~~~~kg~eVl~l~d~iDe~~l~~l~~~~~~~~~~V~~~~ 359 (492)
+ ++++||+||++||+++|+.|||++|++++++++|||+|.|+++|+|||||+|||||+++++|.+|+|++|++|++++
T Consensus 532 ~--~~~~SL~eYv~rMke~Qk~IYY~t~~s~~~~~~SP~lE~~~~kg~EVL~l~d~iDE~~l~~L~e~~gk~~~sV~~~~ 609 (814)
T PTZ00130 532 H--PKSISLDTYIENMKPDQKFIYYASGDSYEYLSKIPQLQIFKKKNIDVVFLTESVDESCVQRVQEYDGKKFKSIQKGE 609 (814)
T ss_pred C--CCccCHHHHHhhhccCCeEEEEEeCCCHHHHhcChHHHHHHhCCCeEEEeCCchHHHHHHHHHHhcCceEEEecccc
Confidence 4 36899999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred ccCcccccccCCCCCCCCCcchHHHHHHHHHHHhccceEEEEEEeecCCccEEEeecchH---HHHHHHHHHhccCchhh
Q psy15896 360 RQDKEEDKSGQILGPDSLPSSDADKLVSWIEEKMKNKVHSVKITTKLDSHPCVVTVEEMA---AARHFLKTQSQNLNEEQ 436 (492)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~e~~~L~~~~k~~L~~~V~~V~vS~rL~~sPa~iv~~e~~---~m~~~~k~~~~~~~~~~ 436 (492)
+.....+++.. .. +..++++++|++|+|++|+++|.+|++|+||++||||||++++| .|++||++|++.++. .
T Consensus 610 ~~~~~~~~e~~--~~-~~~~~~~~~L~~~~k~~L~~~V~~V~vS~RL~~sPa~lv~~e~g~s~~Merimka~~~~~~~-~ 685 (814)
T PTZ00130 610 ITFELTEDEKK--KE-EKVKKMYKALIDVISDTLRNQIFKVEISRRLVDAPCAVVSTEWGLSGQMEKLMKINVNNSDQ-I 685 (814)
T ss_pred ccccccccchh--hh-hHHHHHHHHHHHHHHHHhcCcccEEEEeccCCCCCcEEEecCccccHHHHHHHHHhhccccc-c
Confidence 65432111110 01 11245699999999999999999999999999999999998864 588888888653221 1
Q ss_pred hccCCCceEEEcCCCHHHHHHHhhc--CCChHHHHHHHHHHHHHHHHhcCC-CCCCCCC
Q psy15896 437 RFSLLQPRLEINPKHPVIKKLASLS--SSNPALAELVVQQLFSNAMVVAGL-VEDPRTI 492 (492)
Q Consensus 437 ~~~~~k~iLEINp~HplI~~L~~l~--~~d~~~~~~~~~~Lyd~AlL~~G~-~~dp~~~ 492 (492)
.++.+++||||||+||||++|+... ..+++.++++|+||||||+|++|+ ++||++|
T Consensus 686 ~~~~~k~iLEINp~Hpii~~L~~~~~~~~~~~~~~~~a~~Lyd~AlL~~G~~l~DP~~f 744 (814)
T PTZ00130 686 KAMSGQKILEINPDHPIMIDLLKRSVSNPKDSQLTESIKIIYQSAKLASGFDLEDTADL 744 (814)
T ss_pred ccccCCeEEEECCCCHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHhCCCCCCCHHHH
Confidence 3445799999999999999997543 333456899999999999999987 8999864
No 4
>KOG0019|consensus
Probab=100.00 E-value=8.3e-123 Score=969.46 Aligned_cols=444 Identities=45% Similarity=0.795 Sum_probs=411.2
Q ss_pred CCceEEEecCCCCCCcEEEEEeccchhhhhCHHHHHHHHHHhcCcccccceecccccCCCCcccccCCCCCChHHHHHhh
Q psy15896 1 SGTYEITECPTAEKGTKIVIHLKADCREFADEQTVLNVIRKYSNFVNSPIFVNDNQTNKIQPLWIMEPKSVKLEEHVEFY 80 (492)
Q Consensus 1 ~g~y~i~~~~~~~~GT~I~L~lk~d~~efl~~~~l~~li~kys~fi~~PI~l~~~~~n~~~~~w~~~~~~v~~~e~~~~~ 80 (492)
+|+|+|..++..+|||+|+||||+|..+||++.||+++|+|||+||+|||+++++++
T Consensus 183 ~gs~~v~~~~~~~rGTki~l~lKe~~~ey~ee~rikeiVKK~S~Fv~yPI~l~~ek~----------------------- 239 (656)
T KOG0019|consen 183 RGSYEIAEASGLRTGTKIVIHLKEGDCEFLEEKRIKEVVKKYSNFVSYPIYLNGERV----------------------- 239 (656)
T ss_pred CCceEEeeccCccccceEEeeehhhhhhhccHhHHHHHHhhccccccccchhhhhhh-----------------------
Confidence 589999998889999999999999888999999999999999999999999998774
Q ss_pred hhccCCCCCCcceecccCCCCCccccCCccCchhhHHHHHHHhhcCCCCCceeeeeeecCCcceEEEEEeeCCCCC-ccc
Q psy15896 81 RYISNSNDQPRFVLHYRTGNLPLWIMEPKSVKLEEHVEFYRYISNSNDQPRFVLHYRTDAPLSIKSVLYFPETKPG-LFE 159 (492)
Q Consensus 81 ~~~~~~~~~~~~~~~~~n~~~piW~r~~~~vt~eey~~FYk~~~~~~~~pl~~~H~~~e~~~~~~~llyiP~~~p~-~~~ 159 (492)
|++||||+|+|++||+|+|.+|||+++++|++||++.||++||+++|++|||||.++|+ +|+
T Consensus 240 -----------------N~tKpiW~rnp~dit~eey~eFYksl~ndw~d~lav~hf~~eg~lefrail~vP~rap~~lF~ 302 (656)
T KOG0019|consen 240 -----------------NNLKAIWTMNPKEVNEEEHEEFYKSVSGDWDDPLYVLHFKTDGPLSIRSIFYIPKRAPNSMFD 302 (656)
T ss_pred -----------------hccCcccccCchhhhHHHHHHHHHhhcccccchhhHhhhccccceEEEEEEeccccCcchhhh
Confidence 46789999999999999999999999999999999999999999999999999999994 776
Q ss_pred ccccccCceEEEEeeEEeccccccccccccccccceecCCCCCCccchhhhcCCHHHHHHHHHHHHHHHHHHHHHhhhCH
Q psy15896 160 MSRETEVGVSLYTRRILIKAKAENILPKWLRFVKGVVDSEDIPLNLSRELLQNSPLINKLRNVLTTRILKFLQDRSKRDV 239 (492)
Q Consensus 160 ~~~~~~~~ikLYv~rVfI~d~~~~llP~~l~Fv~GVVDS~dLpLNvSRE~lQ~~~~l~~I~~~l~~ki~~~l~~la~~d~ 239 (492)
.. ..++||+||+|||||+|+|.+++|+||+||+|||||+|||||+|||+||+|++|++||+.|++|+++++.++| +|+
T Consensus 303 ~~-kk~n~i~Ly~rrv~I~d~~~~lipe~l~fv~gvVdSeDlPLNiSremlQ~~~i~k~~rk~l~~k~l~~~~e~a-~d~ 380 (656)
T KOG0019|consen 303 MR-KKKNGIKLYARRVLITDDAGDLIPEWLRFVRGVVDSEDIPLNLSREMLQENAVLRKLRKVLPQKILEMFQDLA-KDA 380 (656)
T ss_pred hh-hccCceEEEEEEEecCchhHHHHHHHhchheeccccccCccchhHHHHhhhhHHHHHHHHHHHHHHHHHHHHh-hhH
Confidence 64 5789999999999999999999999999999999999999999999999999999999999999999999999 899
Q ss_pred HHHHHHHHHhhhhhheeeccCcChhhHHH-HhhhccceecccCCCceecHHHHHHHhcCCCccEEEEeCCCHhHHhcChH
Q psy15896 240 ENYLAFYKDYSLFIKEGIVTTQDVHEKEE-IAKLLRYESSEQEAGTLITLPEYIEKLGEGQKDIYYLCAPSRALALSSPY 318 (492)
Q Consensus 240 e~y~~f~~~~~~~lK~G~~~~~D~~~~~~-l~~llrF~ss~~~~~~~~sL~eYv~rmk~~Q~~IYY~~~~~~~~~~~sp~ 318 (492)
|+|++||++||.+||+|+++ |.+|+.+ +++||||+||.|++ +++||++|+.||+++|++|||++|+|++++++|||
T Consensus 381 e~Y~kFy~~f~~~lk~gi~e--~s~~~~k~~a~lLry~ss~s~~-~~~Sl~dYv~rm~~~qk~iyyi~~~s~~~~~~sp~ 457 (656)
T KOG0019|consen 381 EKYKKFFKNYGLFLKEGIVT--ASEQQVKEIAKLLRYESSKSGE-GATSLDDYVERMREGQKNIYYITAPNRQLAESSPY 457 (656)
T ss_pred HHHHHHHHHHhhhhhhcccc--hhhhhhhHHHHHhhhhcccccc-ccccHHHHHHhhcccccceEEeccchhhhhhcchH
Confidence 99999999999999999997 7788877 99999999999875 57999999999999999999999999999999999
Q ss_pred HHHHhhCCcEEEEcCCcccHHHHHHhhhcCCCceeecccccccCcccccccCCCCCCCCCcchHHHHHHHHHHHhccceE
Q psy15896 319 LEALRERKVQVLFCYEPHDELILLQLRSFQNFNLTSVEKEMRQDKEEDKSGQILGPDSLPSSDADKLVSWIEEKMKNKVH 398 (492)
Q Consensus 319 le~~~~kg~eVl~l~d~iDe~~l~~l~~~~~~~~~~V~~~~~~~~~~~~~~~~~~~~~~~~~e~~~L~~~~k~~L~~~V~ 398 (492)
+|+++++|+|||||.+||||+++++|.+|+|++|++|++++++.+++++++ ++....+.+|+.||+|+|+.||++|+
T Consensus 458 ~E~~k~~~~evly~~ep~DE~~~~~Lk~~~~k~lVsvtkEglel~e~ee~~---~k~ee~k~efe~lck~mK~iL~~kVe 534 (656)
T KOG0019|consen 458 YEAFKKKNYEVLFMYEPADEVVLLGLKEFKGKKLVSVTKEGVELPEDDEEK---AKDEESKKEFEELCKWMKEILGSKVE 534 (656)
T ss_pred HHHHHhcCceeEeeeccHHHHHHHhhhhhcccceeccchhhccCCccchhH---HHHHHHHHHHHHHHHHHHHHhcCceE
Confidence 999999999999999999999999999999999999999998766332222 11122456899999999999999999
Q ss_pred EEEEEeecCCccEEEeecchHH---HHHHHHHHhccCchhhhccCCCceEEEcCCCHHHHHHHhhcCCChH-HHHHHHHH
Q psy15896 399 SVKITTKLDSHPCVVTVEEMAA---ARHFLKTQSQNLNEEQRFSLLQPRLEINPKHPVIKKLASLSSSNPA-LAELVVQQ 474 (492)
Q Consensus 399 ~V~vS~rL~~sPa~iv~~e~~~---m~~~~k~~~~~~~~~~~~~~~k~iLEINp~HplI~~L~~l~~~d~~-~~~~~~~~ 474 (492)
+|++|+||++|||||+++++|| |+++|++|+..+.+...|+.++++|||||+||||+.|.++...|+. .+++++.|
T Consensus 535 kV~vs~RlvssPc~I~t~~~gwsAnmeriMkAqal~d~s~~~ym~~kk~lEINP~hpivk~L~~~~~~dk~d~~k~lv~l 614 (656)
T KOG0019|consen 535 KVTVNNRLVSHPAMITTLEYGWAARMERIMKAQALTDNETMGYMKAKKHLEINPDHPLVKTLRQLRESDKNDTAKDLVEQ 614 (656)
T ss_pred EEEecCcccCCceEEEecccccchhHHHHHhhhhccccChhhhccccceeeeCCCChHHHHHHHHHhcCcchhHHHHHHH
Confidence 9999999999999999999874 8888998887777777888899999999999999999998766543 89999999
Q ss_pred HHHHHHHhcCC-CCCCCCC
Q psy15896 475 LFSNAMVVAGL-VEDPRTI 492 (492)
Q Consensus 475 Lyd~AlL~~G~-~~dp~~~ 492 (492)
||++|||++|| ++||+.|
T Consensus 615 lfetALlssGfsl~dP~~~ 633 (656)
T KOG0019|consen 615 LYETALISAGFSLDDPQTM 633 (656)
T ss_pred HHHHHHHHcCCCcCChHHH
Confidence 99999999999 8999864
No 5
>KOG0020|consensus
Probab=100.00 E-value=6.3e-122 Score=937.89 Aligned_cols=481 Identities=26% Similarity=0.527 Sum_probs=410.8
Q ss_pred CceEEEec---CCCCCCcEEEEEeccchhhhhCHHHHHHHHHHhcCcccccceecccccCCCCcccccCC-CCC-ChHHH
Q psy15896 2 GTYEITEC---PTAEKGTKIVIHLKADCREFADEQTVLNVIRKYSNFVNSPIFVNDNQTNKIQPLWIMEP-KSV-KLEEH 76 (492)
Q Consensus 2 g~y~i~~~---~~~~~GT~I~L~lk~d~~efl~~~~l~~li~kys~fi~~PI~l~~~~~n~~~~~w~~~~-~~v-~~~e~ 76 (492)
.+|+|.++ ++++|||.|+||||+++.+||++++|++||+|||+||+|||+||..+......+-..++ .+- +.++.
T Consensus 227 n~FsvseDprg~tL~RGt~ItL~LkeEA~dyLE~dtlkeLvkkYSqFINFpI~lWsSKt~~~E~pvEEe~~t~e~~~ed~ 306 (785)
T KOG0020|consen 227 NSFSVSEDPRGNTLGRGTEITLYLKEEAGDYLEEDTLKELVKKYSQFINFPISLWSSKTVEVEVPVEEEEETEEDSTEDK 306 (785)
T ss_pred cceeeecCCCCCcccCccEEEEEehhhhhhhcchhHHHHHHHHHHHhcCCceeeeeccceeeecccccccccccccccch
Confidence 47999875 56899999999999999999999999999999999999999999654333332222111 110 11111
Q ss_pred HHhhhhccCCCCCC----cceecc--cCCCCCccccCCccCchhhHHHHHHHhhcCCCCCceeeeeeecCCcceEEEEEe
Q psy15896 77 VEFYRYISNSNDQP----RFVLHY--RTGNLPLWIMEPKSVKLEEHVEFYRYISNSNDQPRFVLHYRTDAPLSIKSVLYF 150 (492)
Q Consensus 77 ~~~~~~~~~~~~~~----~~~~~~--~n~~~piW~r~~~~vt~eey~~FYk~~~~~~~~pl~~~H~~~e~~~~~~~llyi 150 (492)
++..++.+++..++ +++|+| +|+.||||+|.|++||++||..|||++++++.+||+|+||.+||.+.|++||||
T Consensus 307 ea~vEEee~EKpKTKKV~kT~wdWel~NdvKpIW~R~p~eV~EdEYt~FYkSlsKds~dPma~~HF~aEGeVtFksiLyV 386 (785)
T KOG0020|consen 307 EAAVEEEEEEKPKTKKVEKTVWDWELLNDVKPIWLRKPKEVTEDEYTKFYKSLSKDSTDPMAYIHFTAEGEVTFKSILYV 386 (785)
T ss_pred hhhhhhhhhccccccchhhcchhhhhhcccchhhccCchhcchHHHHHHHHhhhccccCccceeeeeccccEEEEEEEEe
Confidence 11112222222111 255776 899999999999999999999999999999999999999999999999999999
Q ss_pred eCCCCC-cccccc-cccCceEEEEeeEEeccccccccccccccccceecCCCCCCccchhhhcCCHHHHHHHHHHHHHHH
Q psy15896 151 PETKPG-LFEMSR-ETEVGVSLYTRRILIKAKAENILPKWLRFVKGVVDSEDIPLNLSRELLQNSPLINKLRNVLTTRIL 228 (492)
Q Consensus 151 P~~~p~-~~~~~~-~~~~~ikLYv~rVfI~d~~~~llP~~l~Fv~GVVDS~dLpLNvSRE~lQ~~~~l~~I~~~l~~ki~ 228 (492)
|+.+|. +|+-+. ....+|+||||||||+|++.+++|.||+||||||||+|||||||||+|||+++|+.|++.|++|++
T Consensus 387 P~~~P~~lf~~Yg~~~~dniKLYVrrVFItDeF~dmmPkYLsFikGvVDSDdLPLNVSrE~LQQHkllKvIkKKLvrK~L 466 (785)
T KOG0020|consen 387 PKKAPRDLFDEYGSKKSDNIKLYVRRVFITDEFHDMMPKYLSFIKGVVDSDDLPLNVSRETLQQHKLLKVIKKKLVRKVL 466 (785)
T ss_pred CCCCchHHHHHhccccccceeEEEEEEEecchHHHHhHHHHHHHhhccCcCcCcccccHHHHHHHHHHHHHHHHHHHHHH
Confidence 999995 675433 567999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhCHHHHHH-HHHHhhhhhheeeccCcChhhHHHHhhhccceecccCCCceecHHHHHHHhcCCCccEEEEeC
Q psy15896 229 KFLQDRSKRDVENYLA-FYKDYSLFIKEGIVTTQDVHEKEEIAKLLRYESSEQEAGTLITLPEYIEKLGEGQKDIYYLCA 307 (492)
Q Consensus 229 ~~l~~la~~d~e~y~~-f~~~~~~~lK~G~~~~~D~~~~~~l~~llrF~ss~~~~~~~~sL~eYv~rmk~~Q~~IYY~~~ 307 (492)
+||++++. ++|.. ||++||.+||.|+++ |+.||..||+||||.||+++ ++.+||++|++|||+.|+.|||++|
T Consensus 467 DmikKia~---e~~~d~FW~EFgtniKLGviE--D~sNr~rLAKLLrFqss~~~-~~~TsLdqYveRMK~kQ~~IyymaG 540 (785)
T KOG0020|consen 467 DMIKKIAG---EKYDDIFWKEFGTNIKLGVIE--DPSNRTRLAKLLRFQSSNHP-TKITSLDQYVERMKEKQDKIYYMAG 540 (785)
T ss_pred HHHHHhhc---cccchHHHHHhccceeeeeee--CcccHHHHHHHHhhhccCCC-CCcccHHHHHHHHhhccccEEEecC
Confidence 99999985 57777 999999999999996 89999999999999999975 6789999999999999999999999
Q ss_pred CCHhHHhcChHHHHHhhCCcEEEEcCCcccHHHHHHhhhcCCCceeecccccccCcccccccCCCCCCCCCcchHHHHHH
Q psy15896 308 PSRALALSSPYLEALRERKVQVLFCYEPHDELILLQLRSFQNFNLTSVEKEMRQDKEEDKSGQILGPDSLPSSDADKLVS 387 (492)
Q Consensus 308 ~~~~~~~~sp~le~~~~kg~eVl~l~d~iDe~~l~~l~~~~~~~~~~V~~~~~~~~~~~~~~~~~~~~~~~~~e~~~L~~ 387 (492)
.|+++++.|||+|.+.++||||||+++|+||||+|.|.+|+|++|++|.+++......+..+ + .- +..+++|+||++
T Consensus 541 ssr~e~E~sPfvERLlkKGyEVi~ltepVDEyciqalpe~d~KkFQNVaKEG~k~~~~eK~K-e-~~-e~l~~~FepL~~ 617 (785)
T KOG0020|consen 541 SSRKEVEKSPFVERLLKKGYEVIYLTEPVDEYCIQALPEFDGKKFQNVAKEGVKFDKSEKTK-E-SH-EALEEEFEPLTK 617 (785)
T ss_pred CcHhhhccCcHHHHHHhcCceEEEEcchhHHHHHHhhhhhcchhHhHHHhhhcccCcccchh-H-HH-HHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999986432211111 0 00 113568999999
Q ss_pred HHH-HHhccceEEEEEEeecCCccEEEeecchH---HHHHHHHHHhcc---CchhhhccCCCceEEEcCCCHHHHHHHhh
Q psy15896 388 WIE-EKMKNKVHSVKITTKLDSHPCVVTVEEMA---AARHFLKTQSQN---LNEEQRFSLLQPRLEINPKHPVIKKLASL 460 (492)
Q Consensus 388 ~~k-~~L~~~V~~V~vS~rL~~sPa~iv~~e~~---~m~~~~k~~~~~---~~~~~~~~~~k~iLEINp~HplI~~L~~l 460 (492)
|+| .+|.++|.+++||+||++|||++|++.+| .|+|+|++|+.+ +++...|+.+|++|||||+||||+.|++.
T Consensus 618 W~k~~alkd~ieka~vSqrL~~spcalVas~~GwsgNmERimksqa~~~~kD~~~~~Y~~qKkt~EINPRHPlirell~R 697 (785)
T KOG0020|consen 618 WLKDKALKDKIEKAVVSQRLTESPCALVASQYGWSGNMERIMKSQAYQKSKDPSKNYYASQKKTFEINPRHPLIRELLRR 697 (785)
T ss_pred HHHhhHHHHHHHHHHHHHHhccCchhhhhhhccccccHHHHHHHhhhhccCCchhhHHhccCceeeeCCCChHHHHHHHH
Confidence 999 55789999999999999999999999976 599999998865 44455677889999999999999999987
Q ss_pred cCCC--hHHHHHHHHHHHHHHHHhcCC-CCCCCC
Q psy15896 461 SSSN--PALAELVVQQLFSNAMVVAGL-VEDPRT 491 (492)
Q Consensus 461 ~~~d--~~~~~~~~~~Lyd~AlL~~G~-~~dp~~ 491 (492)
...+ ++.+++.|.+||++|.|.+|| +.||.+
T Consensus 698 i~adeeD~t~~d~A~lmf~TAtlrSGf~L~d~~~ 731 (785)
T KOG0020|consen 698 IAADEEDETVKDTAVLMFETATLRSGFILQDTKD 731 (785)
T ss_pred hhcCcccchHHHHHHHHHHHHHhhcCccccchHH
Confidence 6544 578999999999999999998 688864
No 6
>COG0326 HtpG Molecular chaperone, HSP90 family [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=4.6e-117 Score=943.20 Aligned_cols=450 Identities=31% Similarity=0.570 Sum_probs=403.8
Q ss_pred CCceEEEecCCCCC-CcEEEEEeccchhhhhCHHHHHHHHHHhcCcccccceecccccCCCCcccccCCCCCChHHHHHh
Q psy15896 1 SGTYEITECPTAEK-GTKIVIHLKADCREFADEQTVLNVIRKYSNFVNSPIFVNDNQTNKIQPLWIMEPKSVKLEEHVEF 79 (492)
Q Consensus 1 ~g~y~i~~~~~~~~-GT~I~L~lk~d~~efl~~~~l~~li~kys~fi~~PI~l~~~~~n~~~~~w~~~~~~v~~~e~~~~ 79 (492)
+|+|||+++++.+| ||+|+||||++..+||++|||++||+|||+||++||++.+++-.+ ..
T Consensus 156 ~g~ytv~~~~~~~~~GT~I~L~Lk~~e~efl~~~rl~~ivkkYSd~i~~PI~~~~~~~~~--------~~---------- 217 (623)
T COG0326 156 EGEYTVEDIDKEPRRGTEITLHLKEEEDEFLEEWRLREIVKKYSDHIAYPIYIEGEKEKD--------EE---------- 217 (623)
T ss_pred CCceEEeeccCCCCCCcEEEEEECCchHHHhhhhHHHHHHHHHhcccccceEEeeecccc--------cc----------
Confidence 48999999998885 999999999999999999999999999999999999997655321 00
Q ss_pred hhhccCCCCCCcceecccCCCCCccccCCccCchhhHHHHHHHhhcCCCCCceeeeeeecCCcceEEEEEeeCCCCCccc
Q psy15896 80 YRYISNSNDQPRFVLHYRTGNLPLWIMEPKSVKLEEHVEFYRYISNSNDQPRFVLHYRTDAPLSIKSVLYFPETKPGLFE 159 (492)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~n~~~piW~r~~~~vt~eey~~FYk~~~~~~~~pl~~~H~~~e~~~~~~~llyiP~~~p~~~~ 159 (492)
.+.|..+|..+|+|+|+++++|+|||.+||++++++|++||.|+|+++||.+++++|||||.++|.+.
T Consensus 218 -----------~~~~e~iN~~~alW~r~ksei~~eeY~eFYk~~~~d~~~Pl~~~h~~~EG~~ey~~ll~iP~~aPfdl- 285 (623)
T COG0326 218 -----------VIEWETINKAKALWTRNKSEITDEEYKEFYKHLAHDFDDPLLWIHNKVEGRLEYTALLFIPSKAPFDL- 285 (623)
T ss_pred -----------chhHHHhccccCcccCChhhCChHHHHHHHHHhhcccCCCeEEEecccccceEEEEEEEccCCCCccc-
Confidence 12344579999999999999999999999999999999999999999999999999999999999422
Q ss_pred ccccccCceEEEEeeEEeccccccccccccccccceecCCCCCCccchhhhcCCHHHHHHHHHHHHHHHHHHHHHhhhCH
Q psy15896 160 MSRETEVGVSLYTRRILIKAKAENILPKWLRFVKGVVDSEDIPLNLSRELLQNSPLINKLRNVLTTRILKFLQDRSKRDV 239 (492)
Q Consensus 160 ~~~~~~~~ikLYv~rVfI~d~~~~llP~~l~Fv~GVVDS~dLpLNvSRE~lQ~~~~l~~I~~~l~~ki~~~l~~la~~d~ 239 (492)
+.++.++|++||||||||||+|.+|||+||+||||||||+|||||||||+||+|++++.||+.|++||+++|.++|+++|
T Consensus 286 ~~~~~k~glkLYv~rVfI~Dd~~~llP~yl~Fv~GvIDS~DLpLNvSRE~LQ~n~~l~~Irk~l~kkvl~~L~~La~~~~ 365 (623)
T COG0326 286 FRRDRKRGLKLYVNRVFIMDDAEDLLPNYLRFVRGVIDSEDLPLNVSREILQQNRILAAIRKALTKKVLSMLEKLAKDDP 365 (623)
T ss_pred ccccccCCcEEEEeeeEEeCChhhhhhHHHhhheeeeecCCCCcccCHHHHccCHHHHHHHHHHHHHHHHHHHHHHhcCH
Confidence 23567899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhhheeeccCcChhhHHHHhhhccceecccCCCceecHHHHHHHhcCCCccEEEEeCCCHhHHhcChHH
Q psy15896 240 ENYLAFYKDYSLFIKEGIVTTQDVHEKEEIAKLLRYESSEQEAGTLITLPEYIEKLGEGQKDIYYLCAPSRALALSSPYL 319 (492)
Q Consensus 240 e~y~~f~~~~~~~lK~G~~~~~D~~~~~~l~~llrF~ss~~~~~~~~sL~eYv~rmk~~Q~~IYY~~~~~~~~~~~sp~l 319 (492)
|+|.+||++||.+||+|+++ |+.|+++|++||||.||..++.+++||+|||+|||++|+.|||++|++..++++||++
T Consensus 366 e~y~~f~~~fg~~LKeG~~e--D~~n~e~l~~lLrf~St~~~~~~~~sl~eYv~rmke~q~~IyY~tges~~~~~~sP~l 443 (623)
T COG0326 366 EKYRKFWKQFGLVLKEGLYE--DFENKEKLLDLLRFRSTSDSGEKTVSLEEYVSRMKEGQKQIYYITGESYQAAKGSPHL 443 (623)
T ss_pred HHHHHHHHHHHHHHHhhhhh--hhhhHHHHHhhhEecccCCCccCcccHHHHHHhcccccceeEEeccccHHHHhcCchH
Confidence 99999999999999999996 8889999999999999643335789999999999999999999999999999999999
Q ss_pred HHHhhCCcEEEEcCCcccHHHHHHhhhcCCCceeecccccccCcccccccCCCCCCCCCcchHHHHHHHHHHHhccceEE
Q psy15896 320 EALRERKVQVLFCYEPHDELILLQLRSFQNFNLTSVEKEMRQDKEEDKSGQILGPDSLPSSDADKLVSWIEEKMKNKVHS 399 (492)
Q Consensus 320 e~~~~kg~eVl~l~d~iDe~~l~~l~~~~~~~~~~V~~~~~~~~~~~~~~~~~~~~~~~~~e~~~L~~~~k~~L~~~V~~ 399 (492)
|.+++||||||+|+|+||+++|..+.+|+|++|++|++++.+++...++.. ...+..+.++++|++++|++|+++|.+
T Consensus 444 E~~k~kgieVL~l~d~iDe~~l~~~~e~egk~~~~i~~~~~~~~~~~~e~~--~~~~~~~~~~~~~~~~~k~~L~~~vk~ 521 (623)
T COG0326 444 ELFKAKGIEVLLLTDRIDEFMLTMLPEFEGKPFKSITKGDLDLELLEEEDE--ADSEEEKKEFKPLLERVKEILGDKVKD 521 (623)
T ss_pred HHHHhcCcEEEecCccchHHHhhhhhhccCCcceeeccccccccccchhhh--hhhHHHHHHHHHHHHHHHHHhcCccce
Confidence 999999999999999999999999999999999999999765433221110 111223557999999999999999999
Q ss_pred EEEEeecCCccEEEeecchH---HHHHHHHHHhccCchhhhccCCCceEEEcCCCHHHHHHHhhcCCChHHHHHHHHHHH
Q psy15896 400 VKITTKLDSHPCVVTVEEMA---AARHFLKTQSQNLNEEQRFSLLQPRLEINPKHPVIKKLASLSSSNPALAELVVQQLF 476 (492)
Q Consensus 400 V~vS~rL~~sPa~iv~~e~~---~m~~~~k~~~~~~~~~~~~~~~k~iLEINp~HplI~~L~~l~~~d~~~~~~~~~~Ly 476 (492)
|++|+||+++|||++++..+ .|+++|++|++..+ ..++||||||+||||++|+... |.+.+++++++||
T Consensus 522 Vr~s~rl~dspa~l~~~~~~~~~~m~r~l~~~~~~~~------~~k~ilEiNp~h~lv~~L~~~~--d~~~~~~~~~lly 593 (623)
T COG0326 522 VRLSHRLTDSPACLTTDGADLSTQMERLLKAQGQEVP------ESKKILEINPNHPLVKKLASLE--DEASVADLVELLY 593 (623)
T ss_pred eEeecccCCCcceeecCccchhHHHHHHHHhccccCC------ccccceeeCcccHHHHHHHhcc--cHHHHHHHHHHHH
Confidence 99999999999999998853 58999999887543 3689999999999999999875 5567899999999
Q ss_pred HHHHHhcCC-CCCCCCC
Q psy15896 477 SNAMVVAGL-VEDPRTI 492 (492)
Q Consensus 477 d~AlL~~G~-~~dp~~~ 492 (492)
|||||++|+ ++||+++
T Consensus 594 dqAll~eg~~~~dp~~F 610 (623)
T COG0326 594 DQALLAEGGPLEDPAAF 610 (623)
T ss_pred HHHHHhCCCCccCHHHH
Confidence 999999998 8999753
No 7
>PRK05218 heat shock protein 90; Provisional
Probab=100.00 E-value=4.4e-105 Score=874.88 Aligned_cols=440 Identities=34% Similarity=0.618 Sum_probs=388.4
Q ss_pred CCceEEEecCCCCCCcEEEEEeccchhhhhCHHHHHHHHHHhcCcccccceecccccCCCCcccccCCCCCChHHHHHhh
Q psy15896 1 SGTYEITECPTAEKGTKIVIHLKADCREFADEQTVLNVIRKYSNFVNSPIFVNDNQTNKIQPLWIMEPKSVKLEEHVEFY 80 (492)
Q Consensus 1 ~g~y~i~~~~~~~~GT~I~L~lk~d~~efl~~~~l~~li~kys~fi~~PI~l~~~~~n~~~~~w~~~~~~v~~~e~~~~~ 80 (492)
+|+|+|.+++..++||+|+||||+++.+|++.++|+++|+|||+||+|||+++++.
T Consensus 157 ~~~~~i~~~~~~~~GT~I~l~Lk~~~~e~~e~~~i~~li~kys~~l~~PI~~~~~~------------------------ 212 (613)
T PRK05218 157 EGEYTIEEIEKEERGTEITLHLKEDEDEFLDEWRIRSIIKKYSDFIPVPIKLEKEE------------------------ 212 (613)
T ss_pred CceeEEeECCCCCCCcEEEEEECcchhhhcCHHHHHHHHHHHHhcCCCCEEEeccc------------------------
Confidence 36899999877789999999999999999999999999999999999999996520
Q ss_pred hhccCCCCCCcceecccCCCCCccccCCccCchhhHHHHHHHhhcCCCCCceeeeeeecCCcceEEEEEeeCCCCCcccc
Q psy15896 81 RYISNSNDQPRFVLHYRTGNLPLWIMEPKSVKLEEHVEFYRYISNSNDQPRFVLHYRTDAPLSIKSVLYFPETKPGLFEM 160 (492)
Q Consensus 81 ~~~~~~~~~~~~~~~~~n~~~piW~r~~~~vt~eey~~FYk~~~~~~~~pl~~~H~~~e~~~~~~~llyiP~~~p~~~~~ 160 (492)
|.++|+.+|+|+|+++++++++|.+||+++++++++||+|+|++++|++.++|+||||..+|..+ +
T Consensus 213 -------------~~~in~~~~~w~~~~~~i~~~~~~~fy~~~~~~~~~pl~~i~~~~e~~~~~~gll~iP~~~~~~~-~ 278 (613)
T PRK05218 213 -------------EETINSASALWTRSKSEITDEEYKEFYKHLAHDFDDPLFWIHNNVEGPFEYTGLLYIPKKAPFDL-F 278 (613)
T ss_pred -------------ceeecCCccceecCCccccHHHHHHHhhhhcccccCCcEEEEcccCCceEEEEEEEeCCCCccch-h
Confidence 22467788888888888888888899999999999999999999999999999999999998422 1
Q ss_pred cccccCceEEEEeeEEeccccccccccccccccceecCCCCCCccchhhhcCCHHHHHHHHHHHHHHHHHHHHHhhhCHH
Q psy15896 161 SRETEVGVSLYTRRILIKAKAENILPKWLRFVKGVVDSEDIPLNLSRELLQNSPLINKLRNVLTTRILKFLQDRSKRDVE 240 (492)
Q Consensus 161 ~~~~~~~ikLYv~rVfI~d~~~~llP~~l~Fv~GVVDS~dLpLNvSRE~lQ~~~~l~~I~~~l~~ki~~~l~~la~~d~e 240 (492)
++..+++++||||||||+|+|++|||+||+||||||||+|||||||||+||+|++|++|++.|++||+++|.+++++|++
T Consensus 279 ~~~~~~~~~lyvn~v~I~d~~~~lLP~wl~Fv~GVVDs~dLplnvSRE~lq~~~~l~~i~~~l~~kv~~~l~~la~~d~~ 358 (613)
T PRK05218 279 NRDRKGGLKLYVKRVFIMDDAEELLPEYLRFVKGVIDSEDLPLNVSREILQEDRVVKKIRKAITKKVLDELEKLAKNDRE 358 (613)
T ss_pred hhcccccEEEEECcEEeeCchhhhchHHHhheEEEeecCCCCCccCHHHHhcCHHHHHHHHHHHHHHHHHHHHHHhhCHH
Confidence 14467999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhhhheeeccCcChhhHHHHhhhccceecccCCCceecHHHHHHHhcCCCccEEEEeCCCHhHHhcChHHH
Q psy15896 241 NYLAFYKDYSLFIKEGIVTTQDVHEKEEIAKLLRYESSEQEAGTLITLPEYIEKLGEGQKDIYYLCAPSRALALSSPYLE 320 (492)
Q Consensus 241 ~y~~f~~~~~~~lK~G~~~~~D~~~~~~l~~llrF~ss~~~~~~~~sL~eYv~rmk~~Q~~IYY~~~~~~~~~~~sp~le 320 (492)
+|++||++||.+||+||++ |.+++++|++||||+||+ +++++||+||++||+++|+.|||++|+|++++++|||+|
T Consensus 359 ~y~~f~~~~~~~lK~g~~~--D~~~~~~~~~lL~f~ts~--~~~~~sL~ey~~rm~~~q~~Iyy~~~~~~~~~~~sp~~e 434 (613)
T PRK05218 359 KYEKFWKEFGPVLKEGLYE--DFANREKLAKLLRFASTH--EGKYVSLAEYVERMKEGQKKIYYITGDSREAAKNSPHLE 434 (613)
T ss_pred HHHHHHHHHHHHHHhhhhc--cHHHHHHHHhhceeeecC--CCCcccHHHHHHhCcCCCceEEEEeCCCHHHHHhChHHH
Confidence 9999999999999999995 788999999999999996 256999999999999999999999999999999999999
Q ss_pred HHhhCCcEEEEcCCcccHHHHHHhhhcCCCceeecccccccCcccccccCCCCCCCCCcchHHHHHHHHHHHhccceEEE
Q psy15896 321 ALRERKVQVLFCYEPHDELILLQLRSFQNFNLTSVEKEMRQDKEEDKSGQILGPDSLPSSDADKLVSWIEEKMKNKVHSV 400 (492)
Q Consensus 321 ~~~~kg~eVl~l~d~iDe~~l~~l~~~~~~~~~~V~~~~~~~~~~~~~~~~~~~~~~~~~e~~~L~~~~k~~L~~~V~~V 400 (492)
.|+++|+|||++++|+|++++++|.+|+|++|++|++++.+....++++. ......++++++|++|++++|+++|++|
T Consensus 435 ~~~~~g~eVl~~~~~~De~~l~~l~~~~~~~~~~i~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~~~~L~~~v~~V 512 (613)
T PRK05218 435 LFKKKGIEVLLLTDPIDEFWISYLEEFDGKPFKSVARGDLDLGKEDEEEK--EEKEEAEEEFKPLLERLKEALGDKVKDV 512 (613)
T ss_pred HHHhcCceEEEeCCccHHHHHHHHHHhcCCceEEeeccccccccccchhh--hhhhhhHHHHHHHHHHHHHHhcCcceEE
Confidence 99999999999999999999999999999999999998764322111110 0111234579999999999999999999
Q ss_pred EEEeecCCccEEEeecchHHHHHH---HHHHhccCchhhhccCCCceEEEcCCCHHHHHHHhhcCCChHHHHHHHHHHHH
Q psy15896 401 KITTKLDSHPCVVTVEEMAAARHF---LKTQSQNLNEEQRFSLLQPRLEINPKHPVIKKLASLSSSNPALAELVVQQLFS 477 (492)
Q Consensus 401 ~vS~rL~~sPa~iv~~e~~~m~~~---~k~~~~~~~~~~~~~~~k~iLEINp~HplI~~L~~l~~~d~~~~~~~~~~Lyd 477 (492)
++|.||+++||||++++++++++| |++|++. +..++++|||||+||||++|++.. +++.++.++++|||
T Consensus 513 ~~s~rl~~~Pa~~v~~~~~~~~~mer~~~~~~~~------~~~~~~~LeiNp~hplI~~L~~~~--d~~~~~~~~~~Lyd 584 (613)
T PRK05218 513 RLSHRLTDSPACLVADEGDMSTQMEKLLKAAGQE------VPESKPILEINPNHPLVKKLADEA--DEAKFKDLAELLYD 584 (613)
T ss_pred EEeccCCCCCeEEEeCccchHHHHHHHHHhhhhc------ccccceEEEEcCCCHHHHHHHhcc--ChHHHHHHHHHHHH
Confidence 999999999999999887765444 4444321 223689999999999999998743 44459999999999
Q ss_pred HHHHhcCC-CCCCCCC
Q psy15896 478 NAMVVAGL-VEDPRTI 492 (492)
Q Consensus 478 ~AlL~~G~-~~dp~~~ 492 (492)
+|+|++|+ ++||+.|
T Consensus 585 ~AlL~~G~~~~d~~~~ 600 (613)
T PRK05218 585 QALLAEGGSLEDPAAF 600 (613)
T ss_pred HHHHhCCCCccCHHHH
Confidence 99999996 7998754
No 8
>PRK14083 HSP90 family protein; Provisional
Probab=100.00 E-value=1.5e-100 Score=832.74 Aligned_cols=415 Identities=20% Similarity=0.252 Sum_probs=356.2
Q ss_pred CCceEEEec--CCCCCCcEEEEEeccchhhhhCHHHHHHHHHHhcCcccccceecccccCCCCcccccCCCCCChHHHHH
Q psy15896 1 SGTYEITEC--PTAEKGTKIVIHLKADCREFADEQTVLNVIRKYSNFVNSPIFVNDNQTNKIQPLWIMEPKSVKLEEHVE 78 (492)
Q Consensus 1 ~g~y~i~~~--~~~~~GT~I~L~lk~d~~efl~~~~l~~li~kys~fi~~PI~l~~~~~n~~~~~w~~~~~~v~~~e~~~ 78 (492)
+|+|+|++. +..++||+|+||+++|+.+|+++++|++|+++||+||+|||+++++.
T Consensus 141 ~g~y~i~~~~~~~~~~GT~I~L~l~~d~~~~~~~~~i~~li~~ys~~i~~pI~l~~~~---------------------- 198 (601)
T PRK14083 141 DGTYSVRKLETERAEPGTTVYLRPRPDAEEWLERETVEELAKKYGSLLPVPIRVEGEK---------------------- 198 (601)
T ss_pred CCceEEEeCCCCCCCCCCEEEEEecCchhhhccHHHHHHHHHHHhccCCCCcccCCce----------------------
Confidence 579999973 56789999999999999999999999999999999999999997521
Q ss_pred hhhhccCCCCCCcceecccCCCCCccccCCccCc--hhhHHHHHHHhhcCCCCCceeeeeeecCCcceEEEEE-eeCCCC
Q psy15896 79 FYRYISNSNDQPRFVLHYRTGNLPLWIMEPKSVK--LEEHVEFYRYISNSNDQPRFVLHYRTDAPLSIKSVLY-FPETKP 155 (492)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~n~~~piW~r~~~~vt--~eey~~FYk~~~~~~~~pl~~~H~~~e~~~~~~~lly-iP~~~p 155 (492)
..+|..+|+|+|+|++|| +|||.+|||.+++ ++||+|+|+++||+.. +|+|| ||..+|
T Consensus 199 ----------------~~iN~~~~lW~~~~~eit~~~eey~~Fyk~~~~--~~Pl~~ih~~~e~~~~-~~~Ly~iP~~~~ 259 (601)
T PRK14083 199 ----------------GGVNETPPPWTRDYPDPETRREALLAYGEELLG--FTPLDVIPLDVPSGGL-EGVAYVLPYAVS 259 (601)
T ss_pred ----------------eeecCCCCCccCCccccCccHHHHHHHHHHhcC--CCchheeeecccchhh-eEEEEecCCCCC
Confidence 124556666666666666 7777799999998 6999999999999865 88887 688887
Q ss_pred CcccccccccCceEEEEeeEEeccccccccccccccccceecCCCCCCccchhhhcCCHHHHHHHHHHHHHHHHHHHHHh
Q psy15896 156 GLFEMSRETEVGVSLYTRRILIKAKAENILPKWLRFVKGVVDSEDIPLNLSRELLQNSPLINKLRNVLTTRILKFLQDRS 235 (492)
Q Consensus 156 ~~~~~~~~~~~~ikLYv~rVfI~d~~~~llP~~l~Fv~GVVDS~dLpLNvSRE~lQ~~~~l~~I~~~l~~ki~~~l~~la 235 (492)
++ .+++|+||||||||+|+|++|||+||+||||||||+|||||||||+||+|+++++||+.|++||+++|.++|
T Consensus 260 --~~----~~~~v~LY~~rVfI~d~~~~lLP~wl~FvrGVVDS~DLpLNvSRE~LQ~~~~l~~ir~~i~kki~~~L~~la 333 (601)
T PRK14083 260 --PA----ARRKHRVYLKRMLLSEEAENLLPDWAFFVRCVVNTDELRPTASREALYEDDALAAVREELGEAIRKWLIGLA 333 (601)
T ss_pred --cc----ccCceEEEeeeeEeecchhhhhHHHHHHheeeeecCCCCCccCHHHHccCHHHHHHHHHHHHHHHHHHHHHH
Confidence 32 368999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhCHHHHHHHHHHhhhhhheeeccCcChhhHHHHhhhccceecccCCCceecHHHHHHHhcCCCccEEEEeCC-CHhHHh
Q psy15896 236 KRDVENYLAFYKDYSLFIKEGIVTTQDVHEKEEIAKLLRYESSEQEAGTLITLPEYIEKLGEGQKDIYYLCAP-SRALAL 314 (492)
Q Consensus 236 ~~d~e~y~~f~~~~~~~lK~G~~~~~D~~~~~~l~~llrF~ss~~~~~~~~sL~eYv~rmk~~Q~~IYY~~~~-~~~~~~ 314 (492)
++||++|++||++||.+||+|+++ |.+++++|++||||+||+ | .+||+||++|| +.|||++|+ ++.++.
T Consensus 334 ~~d~e~y~~f~~~~g~~lK~g~~~--D~~~~~~l~~lL~f~ss~---~-~~sL~eY~~r~----~~IyY~~~~~~~~~~~ 403 (601)
T PRK14083 334 TTDPERLRRLLAVHHLGVKALASH--DDELLRLILPWLPFETTD---G-RMTLAEIRRRH----GVIRYTSSVDEFRQLA 403 (601)
T ss_pred hhCHHHHHHHHHHHHHHHHHHHhc--CHHHHHHHHHhceeecCC---C-CcCHHHHHHhC----CeEEEEcCHHHHHHHH
Confidence 999999999999999999999995 889999999999999997 3 59999999998 589999996 666664
Q ss_pred cChHHHHHhhCCcEEEEcCCcccHHHHHHhhh-cCCCceeecccccccCcccccccCCCCCCCCCcchHHHHHHHHHHHh
Q psy15896 315 SSPYLEALRERKVQVLFCYEPHDELILLQLRS-FQNFNLTSVEKEMRQDKEEDKSGQILGPDSLPSSDADKLVSWIEEKM 393 (492)
Q Consensus 315 ~sp~le~~~~kg~eVl~l~d~iDe~~l~~l~~-~~~~~~~~V~~~~~~~~~~~~~~~~~~~~~~~~~e~~~L~~~~k~~L 393 (492)
+.|++||+|||+|++||||+++++|.+ |+|++|++|++++..+...+.+ ...++++++|++|++++|
T Consensus 404 -----~~~~~kg~eVl~~~~~iDe~~l~~l~~~~~~~~~~~v~~~~~~~~~~~~~-------~~~~~~~~~l~~~~~~~L 471 (601)
T PRK14083 404 -----PIARAQGMGVINGGYTYDSELLERLPRLRPGLTVERLDPAELTDRLEPLT-------PEEELALRPFLAEAREVL 471 (601)
T ss_pred -----HHHHHCCCeEEEeCCccHHHHHHHHHhhCCCCcEEEechhhhhhhccccc-------hhhHHHHHHHHHHHHHHh
Confidence 799999999999999999999999998 9999999999986542222111 113457999999999999
Q ss_pred ccceEEE-EEEeecCCccEEEeecchHHHHHHHHHHh-ccC-------chh-hhccCCCceEEEcCCCHHHHHHHhhcCC
Q psy15896 394 KNKVHSV-KITTKLDSHPCVVTVEEMAAARHFLKTQS-QNL-------NEE-QRFSLLQPRLEINPKHPVIKKLASLSSS 463 (492)
Q Consensus 394 ~~~V~~V-~vS~rL~~sPa~iv~~e~~~m~~~~k~~~-~~~-------~~~-~~~~~~k~iLEINp~HplI~~L~~l~~~ 463 (492)
++++.+| ++|.||+++||||++++.+.|+++|+.+. +.. +.+ ..+..++++|||||+||||++|+++ .
T Consensus 472 ~~~~~~v~~~s~rl~~~Pa~~v~~e~~~~~~~m~~~~~~~~~~~~~~l~~~~~~~~~~~~~LeiN~~hpli~~l~~~--~ 549 (601)
T PRK14083 472 APFGCDVVIRHFEPADLPALYLHDRAAQHSREREEAVEEADDLWADILGSLDESQPAPRARLVLNLRNPLVRRLATL--G 549 (601)
T ss_pred CccceEEEEEcCCCCCCCEEEEeCchhHHHHHHHhhhhhcccchhhhhhhhhhcccccCeEEEECCCCHHHHHHHhc--c
Confidence 9986666 67779999999999999887777765432 111 011 1223468999999999999999875 5
Q ss_pred ChHHHHHHHHHHHHHHHHhcCCC
Q psy15896 464 NPALAELVVQQLFSNAMVVAGLV 486 (492)
Q Consensus 464 d~~~~~~~~~~Lyd~AlL~~G~~ 486 (492)
+++.++.++++|||+|+|++|++
T Consensus 550 d~~~~~~~~~~Lyd~AlL~~g~~ 572 (601)
T PRK14083 550 DPKLLSRAVEALYVQALLLGHRP 572 (601)
T ss_pred ChHHHHHHHHHHHHHHHHhCCCC
Confidence 66789999999999999999873
No 9
>PF00183 HSP90: Hsp90 protein; InterPro: IPR001404 Molecular chaperones, or heat shock proteins (Hsps) are ubiquitous proteins that act to maintain proper protein folding within the cell []. They assist in the folding of nascent polypeptide chains, and are also involved in the re-folding of denatured proteins following proteotoxic stress. As their name implies, the heat shock proteins were first identified as proteins that were up-regulated under conditions of elevated temperature. However, subsequent studies have shown that increased Hsp expression is induced by a variety of cellular stresses, including oxidative stress and inflammation. Five major Hsp families have been determined, and are categorized according to their molecular size (Hsp100, Hsp90, Hsp70, Hsp60, and the small Hsps). Hsps are involved in a variety of cellular processes that are ATP-dependent. These include: prevention of protein aggregation, protein degradation, protein trafficking, and maintenance of signalling proteins in a conformation that permits activation. Hsp90 chaperones are unique in their ability to regulate a specific subset of cellular signalling proteins that have been implicated in disease processes, including intracellular protein kinases, steroid hormone receptors, and growth factor receptors [].; GO: 0005524 ATP binding, 0051082 unfolded protein binding, 0006457 protein folding, 0006950 response to stress; PDB: 3K99_D 2H55_A 3RLP_A 1OSF_A 3R4M_A 1YES_A 1UY9_A 3FT8_A 2YE2_A 2QF6_A ....
Probab=86.17 E-value=0.35 Score=53.43 Aligned_cols=33 Identities=36% Similarity=0.666 Sum_probs=25.1
Q ss_pred ccccCCCCcccccCCCCCChHHHHHhhhhccCC
Q psy15896 54 DNQTNKIQPLWIMEPKSVKLEEHVEFYRYISNS 86 (492)
Q Consensus 54 ~~~~n~~~~~w~~~~~~v~~~e~~~~~~~~~~~ 86 (492)
.+++|+..|||+|++++|+++||.++++.+...
T Consensus 86 ~~~vN~~~piW~r~~~eit~eey~~Fyk~l~~~ 118 (531)
T PF00183_consen 86 WEQVNTQKPIWTRDPKEITDEEYKEFYKSLSKD 118 (531)
T ss_dssp EEECS--S-GGGSSGGGS-HHHHHHHHHHHHTT
T ss_pred cccccccCcccccchhccchHHHHHHHHHhhhc
Confidence 368999999999999999999999988776654
No 10
>PTZ00272 heat shock protein 83 kDa (Hsp83); Provisional
Probab=77.87 E-value=1.8 Score=49.43 Aligned_cols=32 Identities=47% Similarity=0.786 Sum_probs=28.2
Q ss_pred cccCCCCcccccCCCCCChHHHHHhhhhccCC
Q psy15896 55 NQTNKIQPLWIMEPKSVKLEEHVEFYRYISNS 86 (492)
Q Consensus 55 ~~~n~~~~~w~~~~~~v~~~e~~~~~~~~~~~ 86 (492)
+++|+.+|||+++++++++++|.++++.....
T Consensus 260 e~iN~~~~lW~r~~~~i~~eey~~Fyk~~~~~ 291 (701)
T PTZ00272 260 EVQNKHKPLWTRDPKDVTKEEYAAFYKAISND 291 (701)
T ss_pred hhcccCcCCeecCcccCCHHHHHHHHHHhcCC
Confidence 68999999999999999999999887776543
No 11
>PTZ00130 heat shock protein 90; Provisional
Probab=75.78 E-value=2.3 Score=49.15 Aligned_cols=32 Identities=25% Similarity=0.566 Sum_probs=28.4
Q ss_pred cccCCCCcccccCCCCCChHHHHHhhhhccCC
Q psy15896 55 NQTNKIQPLWIMEPKSVKLEEHVEFYRYISNS 86 (492)
Q Consensus 55 ~~~n~~~~~w~~~~~~v~~~e~~~~~~~~~~~ 86 (492)
+++|+.+|||++++++|++++|.++++.+...
T Consensus 320 e~vN~~~aiW~r~~~eit~EeY~eFYk~l~~~ 351 (814)
T PTZ00130 320 KLMNEQKPIWLRPPKELTDEDYKKFFSVLSGF 351 (814)
T ss_pred eeeccCCCcccCCcccCCHHHHHHHHHHhcCC
Confidence 57999999999999999999999888776644
No 12
>COG0326 HtpG Molecular chaperone, HSP90 family [Posttranslational modification, protein turnover, chaperones]
Probab=69.34 E-value=3.4 Score=46.23 Aligned_cols=32 Identities=28% Similarity=0.481 Sum_probs=27.3
Q ss_pred ccccCCCCcccccCCCCCChHHHHHhhhhccC
Q psy15896 54 DNQTNKIQPLWIMEPKSVKLEEHVEFYRYISN 85 (492)
Q Consensus 54 ~~~~n~~~~~w~~~~~~v~~~e~~~~~~~~~~ 85 (492)
.+.+|..+|+|+++++++++++|.++++...-
T Consensus 221 ~e~iN~~~alW~r~ksei~~eeY~eFYk~~~~ 252 (623)
T COG0326 221 WETINKAKALWTRNKSEITDEEYKEFYKHLAH 252 (623)
T ss_pred HHHhccccCcccCChhhCChHHHHHHHHHhhc
Confidence 47899999999999999999999987655443
No 13
>PRK14083 HSP90 family protein; Provisional
Probab=61.80 E-value=5.2 Score=45.03 Aligned_cols=16 Identities=25% Similarity=0.295 Sum_probs=8.7
Q ss_pred CCCCCCccchhhhcCC
Q psy15896 198 SEDIPLNLSRELLQNS 213 (492)
Q Consensus 198 S~dLpLNvSRE~lQ~~ 213 (492)
...+.|-+.|=.++++
T Consensus 263 ~~~v~LY~~rVfI~d~ 278 (601)
T PRK14083 263 RRKHRVYLKRMLLSEE 278 (601)
T ss_pred cCceEEEeeeeEeecc
Confidence 3455666666555544
No 14
>KOG0020|consensus
Probab=46.30 E-value=12 Score=40.77 Aligned_cols=28 Identities=32% Similarity=0.790 Sum_probs=24.8
Q ss_pred cccCCCCcccccCCCCCChHHHHHhhhh
Q psy15896 55 NQTNKIQPLWIMEPKSVKLEEHVEFYRY 82 (492)
Q Consensus 55 ~~~n~~~~~w~~~~~~v~~~e~~~~~~~ 82 (492)
+.+|...|+|.|.|++|+++||..+++-
T Consensus 331 el~NdvKpIW~R~p~eV~EdEYt~FYkS 358 (785)
T KOG0020|consen 331 ELLNDVKPIWLRKPKEVTEDEYTKFYKS 358 (785)
T ss_pred hhhcccchhhccCchhcchHHHHHHHHh
Confidence 5689999999999999999999977543
No 15
>KOG0019|consensus
Probab=38.88 E-value=56 Score=36.71 Aligned_cols=75 Identities=9% Similarity=-0.104 Sum_probs=64.5
Q ss_pred ecHHHHHHHhcCCCccEEEEeCCCHhHHhcChHHHHHhhCCcEEEEcCCcccHHHHHHhhhcCCCceeecccccc
Q psy15896 286 ITLPEYIEKLGEGQKDIYYLCAPSRALALSSPYLEALRERKVQVLFCYEPHDELILLQLRSFQNFNLTSVEKEMR 360 (492)
Q Consensus 286 ~sL~eYv~rmk~~Q~~IYY~~~~~~~~~~~sp~le~~~~kg~eVl~l~d~iDe~~l~~l~~~~~~~~~~V~~~~~ 360 (492)
.+.-.|+.+++..+.-+|+...-..+.+..+-|-..-+..|+.+....-+||+.|...+.+|-++-..-|+++++
T Consensus 269 w~d~lav~hf~~eg~lefrail~vP~rap~~lF~~~kk~n~i~Ly~rrv~I~d~~~~lipe~l~fv~gvVdSeDl 343 (656)
T KOG0019|consen 269 WDDPLYVLHFKTDGPLSIRSIFYIPKRAPNSMFDMRKKKNGIKLYARRVLITDDAGDLIPEWLRFVRGVVDSEDI 343 (656)
T ss_pred ccchhhHhhhccccceEEEEEEeccccCcchhhhhhhccCceEEEEEEEecCchhHHHHHHHhchheeccccccC
Confidence 556679999999999888888877777777778888888999999999999999999999999988877888765
No 16
>smart00481 POLIIIAc DNA polymerase alpha chain like domain. DNA polymerase alpha chain like domain, incl. family of hypothetical proteins
Probab=37.19 E-value=45 Score=25.62 Aligned_cols=58 Identities=7% Similarity=0.019 Sum_probs=35.1
Q ss_pred cceecccCCCceecHHHHHHHhcCCCccEEEEeCCC-HhHHhcChHHHHHhhCCcEEEEcC
Q psy15896 274 RYESSEQEAGTLITLPEYIEKLGEGQKDIYYLCAPS-RALALSSPYLEALRERKVQVLFCY 333 (492)
Q Consensus 274 rF~ss~~~~~~~~sL~eYv~rmk~~Q~~IYY~~~~~-~~~~~~sp~le~~~~kg~eVl~l~ 333 (492)
.-+|..|.-++.+++++|+++.++..=...-+|.-+ ... ..++.+.+++.|+.||...
T Consensus 3 H~Ht~~S~~~~~~~~~~~~~~a~~~g~~~v~iTDh~~~~~--~~~~~~~~~~~gi~~i~G~ 61 (67)
T smart00481 3 HVHSDYSLLDGALSPEELVKRAKELGLKAIAITDHGNLFG--AVEFYKAAKKAGIKPIIGL 61 (67)
T ss_pred ccccCCccccccCCHHHHHHHHHHcCCCEEEEeeCCcccC--HHHHHHHHHHcCCeEEEEE
Confidence 345665531246899999998876555555555543 221 1244566677888887654
No 17
>PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long). This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall
Probab=37.17 E-value=64 Score=34.01 Aligned_cols=69 Identities=23% Similarity=0.414 Sum_probs=46.5
Q ss_pred ceecHHHHHHHhcCCCccEEEEeCCCHhHH-----------------hcChHHHHHhhCCcEEEEcCCcccHHHHHHhhh
Q psy15896 284 TLITLPEYIEKLGEGQKDIYYLCAPSRALA-----------------LSSPYLEALRERKVQVLFCYEPHDELILLQLRS 346 (492)
Q Consensus 284 ~~~sL~eYv~rmk~~Q~~IYY~~~~~~~~~-----------------~~sp~le~~~~kg~eVl~l~d~iDe~~l~~l~~ 346 (492)
+++.++||++-+.. =.|.|.... |+++ +++|+.+-++++|+.|+|..|.+|+.++....
T Consensus 252 e~mpf~eYl~lL~~--cDl~if~~~-RQQgiGnI~lLl~~G~~v~L~~~np~~~~l~~~~ipVlf~~d~L~~~~v~ea~- 327 (360)
T PF07429_consen 252 EFMPFDEYLALLSR--CDLGIFNHN-RQQGIGNICLLLQLGKKVFLSRDNPFWQDLKEQGIPVLFYGDELDEALVREAQ- 327 (360)
T ss_pred hhCCHHHHHHHHHh--CCEEEEeec-hhhhHhHHHHHHHcCCeEEEecCChHHHHHHhCCCeEEeccccCCHHHHHHHH-
Confidence 46889999876642 123222221 2221 57899999999999999999999999997642
Q ss_pred cCCCceeeccccc
Q psy15896 347 FQNFNLTSVEKEM 359 (492)
Q Consensus 347 ~~~~~~~~V~~~~ 359 (492)
.++.++++..
T Consensus 328 ---rql~~~dk~~ 337 (360)
T PF07429_consen 328 ---RQLANVDKQQ 337 (360)
T ss_pred ---HHHhhCcccc
Confidence 3344454443
No 18
>PF06112 Herpes_capsid: Gammaherpesvirus capsid protein; InterPro: IPR009299 This family consists of several Gammaherpesvirus capsid proteins. The exact function of this family is unknown.; GO: 0019028 viral capsid
Probab=34.62 E-value=44 Score=30.75 Aligned_cols=36 Identities=28% Similarity=0.480 Sum_probs=25.0
Q ss_pred EEEcCCCHHHHHHHhhcCCC---hH--------HHHHHHHHHHHHHH
Q psy15896 445 LEINPKHPVIKKLASLSSSN---PA--------LAELVVQQLFSNAM 480 (492)
Q Consensus 445 LEINp~HplI~~L~~l~~~d---~~--------~~~~~~~~Lyd~Al 480 (492)
=+.+|+||||.+|..+...| ++ ++=.+|++.||+=+
T Consensus 16 E~d~p~~plv~~~~~L~q~Nms~~~y~~a~r~YLVFL~Aq~~Yd~yv 62 (147)
T PF06112_consen 16 EADYPNHPLVAKLQALPQNNMSDAEYREAQRNYLVFLIAQHCYDQYV 62 (147)
T ss_pred cccCCCCHHHHHHHhhccCCCCHHHHHHhhhchhhhhhHHHHHHHHH
Confidence 36899999999999886544 11 23356777887643
No 19
>COG3081 Nucleoid-associated protein [General function prediction only]
Probab=31.92 E-value=1e+02 Score=31.37 Aligned_cols=119 Identities=17% Similarity=0.201 Sum_probs=65.0
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHhhh----C-HHHHHHHHHHhhhhhheeeccC-cChhhHHHHhhhccceecccCCCce
Q psy15896 212 NSPLINKLRNVLTTRILKFLQDRSKR----D-VENYLAFYKDYSLFIKEGIVTT-QDVHEKEEIAKLLRYESSEQEAGTL 285 (492)
Q Consensus 212 ~~~~l~~I~~~l~~ki~~~l~~la~~----d-~e~y~~f~~~~~~~lK~G~~~~-~D~~~~~~l~~llrF~ss~~~~~~~ 285 (492)
.++.|.-|+-.+++||-+++.+..-. | +..=.-..+.++-+.-.+-+.- +-...++.+. -|-+++-..|+.
T Consensus 163 S~rYltfiKGrvGrKVsDfFmDFlga~eGld~~~qnr~LLqAvsDfca~a~l~keq~q~~kkqv~---eYc~~Q~~~Gee 239 (335)
T COG3081 163 STRYLTFIKGRVGRKVSDFFMDFLGASEGLNAKAQNRGLLQAVSDFCAEADLDKEERQAVKKQVY---EYCNEQLQAGEE 239 (335)
T ss_pred cceeeeeecccccccHHHHHHHHhcccccCCcHHhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHH---HHHHHHHhcCCc
Confidence 34444444446677787777764321 1 1111222333333322222210 0011223333 333343334788
Q ss_pred ecHHHHHHHhcCCCccEEEEeCCCHhHHhcChHHHHHhhCCcEEEEcCCcccHHHHHHhhhcCC
Q psy15896 286 ITLPEYIEKLGEGQKDIYYLCAPSRALALSSPYLEALRERKVQVLFCYEPHDELILLQLRSFQN 349 (492)
Q Consensus 286 ~sL~eYv~rmk~~Q~~IYY~~~~~~~~~~~sp~le~~~~kg~eVl~l~d~iDe~~l~~l~~~~~ 349 (492)
++|++.-+.|+.-+. -+|.+-.+.|||.. -=.=|-|--.+.+|.+|.|
T Consensus 240 i~l~~LS~~lp~~~e---------------~~F~~ft~eq~YgL-ees~PadrsTl~qltkf~G 287 (335)
T COG3081 240 IELQELSKELPGLNE---------------VAFYDFTAEKGYGL-EESFPADRSTLRQLTKFAG 287 (335)
T ss_pred eeHHHHHhhCCCcCc---------------chHHHHHHhcccCC-CccCCccHHHHHHHHHhcC
Confidence 999999998875543 35666677888853 2234889999999999976
No 20
>PF14204 Ribosomal_L18_c: Ribosomal L18 C-terminal region; PDB: 2ZKR_n 4A1E_M 4A1C_M 4A1A_M 4A17_M 3O58_E 1S1I_E 3IZS_Q 3O5H_E 3IZR_Q.
Probab=30.82 E-value=8 Score=32.96 Aligned_cols=50 Identities=18% Similarity=0.349 Sum_probs=34.0
Q ss_pred HHHHHHHHHHHhhhCHHHHHHHHHHhhhhhheeeccCcChhhHHHHhhhccce
Q psy15896 224 TTRILKFLQDRSKRDVENYLAFYKDYSLFIKEGIVTTQDVHEKEEIAKLLRYE 276 (492)
Q Consensus 224 ~~ki~~~l~~la~~d~e~y~~f~~~~~~~lK~G~~~~~D~~~~~~l~~llrF~ 276 (492)
+.-|.+++..|.++||++|++ +|+..||.|+-.++=.+...++..-+|=.
T Consensus 10 G~HVaeYm~~L~eed~e~yk~---qFs~yik~gi~p~~le~~y~~~h~~Ir~d 59 (94)
T PF14204_consen 10 GGHVAEYMEELKEEDPEKYKR---QFSKYIKKGIEPDDLEEMYKKAHAAIRED 59 (94)
T ss_dssp SSHCHHHHHSCSSCSSSTCSH---HHHHHHHHHCSSSHHHHHHHHHHHCCCHS
T ss_pred chhHHHHHHHHHhhCHHHHHH---HHHHHHHCCCChhHHHHHHHHHHHHHHhC
Confidence 345678999999999999986 67888999996532122345555555443
No 21
>PTZ00069 60S ribosomal protein L5; Provisional
Probab=30.55 E-value=65 Score=32.99 Aligned_cols=36 Identities=19% Similarity=0.539 Sum_probs=29.3
Q ss_pred HHHHHHHHHHHHHHhhhCHHHHHHHHHHhhhhhheeecc
Q psy15896 221 NVLTTRILKFLQDRSKRDVENYLAFYKDYSLFIKEGIVT 259 (492)
Q Consensus 221 ~~l~~ki~~~l~~la~~d~e~y~~f~~~~~~~lK~G~~~ 259 (492)
...+.-|.+++..|.++|+|.|. ++|+..||.|+-.
T Consensus 199 rI~G~HVa~Ym~~Lkeedee~yk---~qFS~yik~gl~~ 234 (300)
T PTZ00069 199 RIFGKHVAEYMKQLKEEDPDKYK---KQFSKYIKAGVGP 234 (300)
T ss_pred hhcchhHHHHHHHhhhhChHHHH---HHHHHHHHcCCCh
Confidence 44567788999999999999775 5789999999965
No 22
>TIGR00585 mutl DNA mismatch repair protein MutL. All proteins in this family for which the functions are known are involved in the process of generalized mismatch repair. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=28.43 E-value=2.9e+02 Score=28.17 Aligned_cols=44 Identities=18% Similarity=0.322 Sum_probs=30.2
Q ss_pred CCCCcEEEEE-e---ccchhhhhC-----HHHHHHHHHHhc---Ccccccceeccc
Q psy15896 12 AEKGTKIVIH-L---KADCREFAD-----EQTVLNVIRKYS---NFVNSPIFVNDN 55 (492)
Q Consensus 12 ~~~GT~I~L~-l---k~d~~efl~-----~~~l~~li~kys---~fi~~PI~l~~~ 55 (492)
.++||+|++. | -+....|+. ..++++++.+|+ -.|.|.++.+++
T Consensus 139 ~~~GTtV~v~~lf~n~p~r~~~~~~~~~~~~~i~~~l~~~al~~p~i~f~l~~~~~ 194 (312)
T TIGR00585 139 RPVGTTVEVRDLFYNLPVRRKFLKSPKKEFRKILDLLNRYALIHPDVSFSLTHDGK 194 (312)
T ss_pred CCCccEEEEchhhccCchhhhhccCcHHHHHHHHHHHHHHhhcCCCeEEEEEECCE
Confidence 3799999997 1 022222332 468999999999 677788887654
No 23
>PF08163 NUC194: NUC194 domain; InterPro: IPR012582 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This is domain B in the catalytic subunit of DNA-dependent protein kinases.; GO: 0003677 DNA binding, 0004677 DNA-dependent protein kinase activity, 0005524 ATP binding, 0006303 double-strand break repair via nonhomologous end joining, 0005634 nucleus
Probab=26.16 E-value=20 Score=38.30 Aligned_cols=24 Identities=21% Similarity=0.638 Sum_probs=21.9
Q ss_pred ccccccccccccceecCCCCCCcc
Q psy15896 182 ENILPKWLRFVKGVVDSEDIPLNL 205 (492)
Q Consensus 182 ~~llP~~l~Fv~GVVDS~dLpLNv 205 (492)
..-+|.||.|+++.+..+..|+||
T Consensus 303 ~~~mP~WM~~l~~~l~~~s~~~NI 326 (394)
T PF08163_consen 303 PSEMPPWMKFLHKKLSNPSTHLNI 326 (394)
T ss_pred cCCCCHHHHHHHHHhcCCCCCcce
Confidence 346999999999999999999997
No 24
>COG1578 Uncharacterized conserved protein [Function unknown]
Probab=24.65 E-value=6.8e+02 Score=25.60 Aligned_cols=59 Identities=17% Similarity=0.192 Sum_probs=35.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhCHHHHHHH--HHHhhhhhheeeccCcChhhHHHHhhhc
Q psy15896 215 LINKLRNVLTTRILKFLQDRSKRDVENYLAF--YKDYSLFIKEGIVTTQDVHEKEEIAKLL 273 (492)
Q Consensus 215 ~l~~I~~~l~~ki~~~l~~la~~d~e~y~~f--~~~~~~~lK~G~~~~~D~~~~~~l~~ll 273 (492)
-.++-.+.+..+++..+++-..+.++.+.+- ...-|..|-.|+.-...++..+.+.+++
T Consensus 73 e~K~r~NeiA~~vl~~vr~~~~~~~~dl~~Avk~ai~GN~iDfgv~G~~~~~lee~~~~~~ 133 (285)
T COG1578 73 EYKRRANEIALKVLPKVRENIEDTPEDLKTAVKLAIVGNVIDFGVLGFSPFDLEEEVEKLL 133 (285)
T ss_pred HHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHhcceeeccccCCHhHHHHHHHHhh
Confidence 3455566777777777776555667666653 3446777777776212334445555544
No 25
>PRK04081 hypothetical protein; Provisional
Probab=24.39 E-value=1.2e+02 Score=29.35 Aligned_cols=42 Identities=17% Similarity=0.298 Sum_probs=33.4
Q ss_pred CCceEEEecCCCCCCcEEEEEeccchhhhhCHHHHHHHHHHhc
Q psy15896 1 SGTYEITECPTAEKGTKIVIHLKADCREFADEQTVLNVIRKYS 43 (492)
Q Consensus 1 ~g~y~i~~~~~~~~GT~I~L~lk~d~~efl~~~~l~~li~kys 43 (492)
+|+|.|-+.-+.. =|+|+|.=.+..+.+|..+.+++||+.=-
T Consensus 58 ~G~YKI~eE~Ps~-~Trvilr~~dG~ER~LS~eE~dkLi~eE~ 99 (207)
T PRK04081 58 DGSYKILEEYPSS-ETRVVLRDLDGTERVLSQEEIDKLIKEEE 99 (207)
T ss_pred CCceEeeeecCCC-cceEEEecCCCcccccCHHHHHHHHHHHH
Confidence 5788886532222 59999999999999999999999998643
No 26
>PF06523 DUF1106: Protein of unknown function (DUF1106); InterPro: IPR009490 This family consists of several hypothetical bacterial proteins found in Escherichia coli and Citrobacter rodentium. The function of this family is unknown.
Probab=24.02 E-value=33 Score=27.77 Aligned_cols=26 Identities=23% Similarity=0.344 Sum_probs=22.9
Q ss_pred cccCceEEEEeeEEeccccccccccc
Q psy15896 163 ETEVGVSLYTRRILIKAKAENILPKW 188 (492)
Q Consensus 163 ~~~~~ikLYv~rVfI~d~~~~llP~~ 188 (492)
..++.|-||-++-+|.|..+++.|+-
T Consensus 56 nn~~hi~ly~kk~yi~dklkeifpde 81 (91)
T PF06523_consen 56 NNSNHIFLYHKKNYIFDKLKEIFPDE 81 (91)
T ss_pred CCcceEEEEecchhHHHHHHHhCCCC
Confidence 45678999999999999999999974
No 27
>PF04122 CW_binding_2: Putative cell wall binding repeat 2; InterPro: IPR007253 This repeat is found in multiple tandem copies in proteins including amidase enhancers [] and adhesins [].
Probab=23.07 E-value=2.1e+02 Score=23.41 Aligned_cols=55 Identities=11% Similarity=0.138 Sum_probs=40.3
Q ss_pred CCccEEEEeCCCH-hHHhcChHHHHHhhCCcEEEEcCCcccHHHHHHhhhcCCCceeec
Q psy15896 298 GQKDIYYLCAPSR-ALALSSPYLEALRERKVQVLFCYEPHDELILLQLRSFQNFNLTSV 355 (492)
Q Consensus 298 ~Q~~IYY~~~~~~-~~~~~sp~le~~~~kg~eVl~l~d~iDe~~l~~l~~~~~~~~~~V 355 (492)
+.+.+|.+.|.+. +.+..+|+ +.+.|..||+..+.+++.+...|......++.-|
T Consensus 24 ~~~~v~ia~g~~~~Dalsa~~~---a~~~~~PIll~~~~l~~~~~~~l~~~~~~~v~ii 79 (92)
T PF04122_consen 24 KSDKVYIASGDNFADALSASPL---AAKNNAPILLVNNSLPSSVKAFLKSLNIKKVYII 79 (92)
T ss_pred CCCEEEEEeCcchhhhhhhHHH---HHhcCCeEEEECCCCCHHHHHHHHHcCCCEEEEE
Confidence 5567888998864 44445543 3447889999998999999999988766666555
No 28
>PF12170 DNA_pol3_tau_5: DNA polymerase III tau subunit V interacting with alpha; InterPro: IPR021029 This domain family is found in bacteria, and is approximately 140 amino acids in length. The family is found in association with PF00004 from PFAM. Domains I-III are shared between the tau and the gamma subunits, while most of the DnaB-binding Domain IV and all of the alpha-interacting Domain V are unique to tau. The extreme C-terminal region of this domain 5 is the part which interacts with the alpha subunit of the DNA polymerase III holoenzyme [, ]. ; GO: 0003887 DNA-directed DNA polymerase activity; PDB: 2AYA_A.
Probab=22.16 E-value=78 Score=28.94 Aligned_cols=40 Identities=13% Similarity=0.412 Sum_probs=31.7
Q ss_pred CCcEEEEEeccchhhhhCHHHHHHHHHHhcCcccccceec
Q psy15896 14 KGTKIVIHLKADCREFADEQTVLNVIRKYSNFVNSPIFVN 53 (492)
Q Consensus 14 ~GT~I~L~lk~d~~efl~~~~l~~li~kys~fi~~PI~l~ 53 (492)
.|-.|.|+|+++..+...+...+.|-.--|.+.+.||.|.
T Consensus 50 ~~~~v~L~L~~~q~HL~~~~a~~~L~~ALs~~~g~~i~L~ 89 (142)
T PF12170_consen 50 EDDQVCLHLRPSQKHLNNDSAQEQLQQALSEYLGEPIKLS 89 (142)
T ss_dssp -SSEEEEEE-GGGTTT--HHHHHHHHHHHHHHHSS--EEE
T ss_pred cCCEEEEEEChhhHhhCCHHHHHHHHHHHHHHhCCCEEEE
Confidence 4789999999999999999999999999999999999985
No 29
>PRK05218 heat shock protein 90; Provisional
Probab=21.90 E-value=44 Score=37.83 Aligned_cols=18 Identities=17% Similarity=0.477 Sum_probs=9.8
Q ss_pred HHHHHhhCCcEEEEcCCc
Q psy15896 318 YLEALRERKVQVLFCYEP 335 (492)
Q Consensus 318 ~le~~~~kg~eVl~l~d~ 335 (492)
|++.++..--.+.|++.+
T Consensus 405 y~~rm~~~q~~Iyy~~~~ 422 (613)
T PRK05218 405 YVERMKEGQKKIYYITGD 422 (613)
T ss_pred HHHhCcCCCceEEEEeCC
Confidence 455554434466666654
No 30
>COG1480 Predicted membrane-associated HD superfamily hydrolase [General function prediction only]
Probab=21.17 E-value=75 Score=36.24 Aligned_cols=18 Identities=50% Similarity=0.759 Sum_probs=14.0
Q ss_pred ceEE-EcCCCHHHHHHHhh
Q psy15896 443 PRLE-INPKHPVIKKLASL 460 (492)
Q Consensus 443 ~iLE-INp~HplI~~L~~l 460 (492)
+-+| -||||||.|+|+.-
T Consensus 468 rL~ELsnpNhPLLkkll~E 486 (700)
T COG1480 468 RLLELSNPNHPLLKKLLTE 486 (700)
T ss_pred hHHHhcCCCcHHHHHHHhh
Confidence 3444 39999999999863
Done!