BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy15899
(104 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|125901787|gb|ABN58714.1| pol-like protein [Biomphalaria glabrata]
Length = 1222
Score = 62.0 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 36/92 (39%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Query: 4 CSNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAIANPYLSCPIISQIYSAWCDLK 63
CS AEL AILL L ++K +F++ SDS +L A+ P++ + DL
Sbjct: 989 CSIFTAELHAILLALMAVKASERSKFIICSDSKSALQALGRMKTDIPLVHKSLKL-LDLI 1047
Query: 64 TVGQYYVKLMWCPSHCGIRGNEAVDQAAKDPL 95
T + V +W PSH GI GNEA D+ AK L
Sbjct: 1048 TADRRDVTFIWVPSHVGIEGNEAADREAKRAL 1079
>gi|443693558|gb|ELT94903.1| hypothetical protein CAPTEDRAFT_189741, partial [Capitella teleta]
Length = 502
Score = 61.2 bits (147), Expect = 7e-08, Method: Composition-based stats.
Identities = 37/96 (38%), Positives = 58/96 (60%), Gaps = 6/96 (6%)
Query: 9 AELIAI---LLCLRSIKNHPAMRFLLVSDSMGSLSAIANPYLSCPIISQIYSAWCDLKTV 65
AELIAI L+ + ++K+ +F + SDS+ SL+A++N ++ P + I + +L
Sbjct: 119 AELIAIEQALIFIETVKDED--QFNICSDSLSSLTALSNCDITHPYLLSILTKQNNLVRK 176
Query: 66 GQYYVKLMWCPSHCGIRGNEAVDQAAKDPLLSPVIE 101
G+ V +WCPSH GI GNE D+ AK L+ PV +
Sbjct: 177 GKLVV-FIWCPSHVGILGNEVADRLAKQALVMPVTK 211
>gi|443712830|gb|ELU05953.1| hypothetical protein CAPTEDRAFT_202466 [Capitella teleta]
Length = 397
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 58/96 (60%), Gaps = 6/96 (6%)
Query: 9 AELIAI---LLCLRSIKNHPAMRFLLVSDSMGSLSAIANPYLSCPIISQIYSAWCDLKTV 65
AELIAI L+ + ++K+ +F + SDS+ SL+A++N ++ P + I + +L
Sbjct: 168 AELIAIEQALIFIETVKDED--QFNICSDSLSSLTALSNCDITHPYLLSILTKQNNLVRK 225
Query: 66 GQYYVKLMWCPSHCGIRGNEAVDQAAKDPLLSPVIE 101
G+ V +WCPSH GI GNE D+ AK L+ PV +
Sbjct: 226 GKKVV-FIWCPSHVGILGNEVADRQAKQALVMPVTK 260
>gi|443724607|gb|ELU12531.1| hypothetical protein CAPTEDRAFT_208903 [Capitella teleta]
Length = 397
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 58/96 (60%), Gaps = 6/96 (6%)
Query: 9 AELIAI---LLCLRSIKNHPAMRFLLVSDSMGSLSAIANPYLSCPIISQIYSAWCDLKTV 65
AELIAI L+ + ++K+ +F + SDS+ SL+A++N ++ P + I + +L
Sbjct: 168 AELIAIEQALIFIETMKDED--QFNICSDSLSSLTALSNCDITHPYLLSILTKQNNLVRK 225
Query: 66 GQYYVKLMWCPSHCGIRGNEAVDQAAKDPLLSPVIE 101
G+ V +WCPSH GI GNE D+ AK L+ PV +
Sbjct: 226 GKLVV-FIWCPSHVGILGNEVADRLAKQALVMPVTK 260
>gi|443695973|gb|ELT96755.1| hypothetical protein CAPTEDRAFT_23017, partial [Capitella teleta]
Length = 261
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 58/96 (60%), Gaps = 6/96 (6%)
Query: 9 AELIAI---LLCLRSIKNHPAMRFLLVSDSMGSLSAIANPYLSCPIISQIYSAWCDLKTV 65
AELIAI L+ + ++K+ +F + SDS+ SL+A++N ++ P + I + +L
Sbjct: 73 AELIAIEQALIFIETVKDED--QFNICSDSLSSLTALSNCDITHPYLLSILTKQNNLVRK 130
Query: 66 GQYYVKLMWCPSHCGIRGNEAVDQAAKDPLLSPVIE 101
G+ V +WCPSH GI GNE D+ AK L+ PV +
Sbjct: 131 GKLVV-FIWCPSHVGILGNEVADRLAKQALVMPVTK 165
>gi|443721618|gb|ELU10867.1| hypothetical protein CAPTEDRAFT_200496, partial [Capitella teleta]
Length = 471
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 35/92 (38%), Positives = 54/92 (58%), Gaps = 6/92 (6%)
Query: 9 AELIAILLCLRSIK-NHPAMRFLLVSDSMGSLSAIANPYLSCPIISQIYSAWCDLKTVGQ 67
+E+IAIL LR ++ ++ +F++ SDS+ ++ AI + P + Q+ A +K++ Q
Sbjct: 58 SEIIAILSALRCVEADNEQHQFVICSDSLSAIMAIHGMDVRHPYVLQVLYA---IKSISQ 114
Query: 68 Y--YVKLMWCPSHCGIRGNEAVDQAAKDPLLS 97
V MWCPSH GI GNE D AK+ L S
Sbjct: 115 QEKIVVFMWCPSHVGIPGNEMADTLAKEALSS 146
>gi|443734745|gb|ELU18611.1| hypothetical protein CAPTEDRAFT_216906 [Capitella teleta]
Length = 252
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 48/89 (53%), Gaps = 3/89 (3%)
Query: 9 AELIAI--LLCLRSIKNHPAMRFLLVSDSMGSLSAIANPYLSCPIISQIYSAWCDLKTVG 66
AEL+AI +L L + +FL+ +DS+ SL AI N + P + +I L G
Sbjct: 155 AELLAIYQVLTLLECSANDQQQFLIATDSLSSLQAIGNFNIKHPYVFKILEKCTLLHKKG 214
Query: 67 QYYVKLMWCPSHCGIRGNEAVDQAAKDPL 95
Y V + WCPSH G+ GNE D AK+ L
Sbjct: 215 IYLV-MAWCPSHVGVMGNERADLLAKEAL 242
>gi|443710566|gb|ELU04776.1| hypothetical protein CAPTEDRAFT_186063 [Capitella teleta]
Length = 377
Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 48/89 (53%), Gaps = 3/89 (3%)
Query: 9 AELIAI--LLCLRSIKNHPAMRFLLVSDSMGSLSAIANPYLSCPIISQIYSAWCDLKTVG 66
AEL+AI +L L + +FL+ +DS+ SL AI N + P + +I L G
Sbjct: 224 AELLAIYQVLTLLECSANDQQQFLIATDSLSSLQAIGNFNIKHPYVFKILEKCTLLHKKG 283
Query: 67 QYYVKLMWCPSHCGIRGNEAVDQAAKDPL 95
Y V + WCPSH G+ GNE D AK+ L
Sbjct: 284 IYLV-MAWCPSHVGVMGNERADLLAKEAL 311
>gi|443691945|gb|ELT93673.1| hypothetical protein CAPTEDRAFT_224783 [Capitella teleta]
Length = 354
Score = 56.2 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 37/96 (38%), Positives = 57/96 (59%), Gaps = 6/96 (6%)
Query: 9 AELIAI---LLCLRSIKNHPAMRFLLVSDSMGSLSAIANPYLSCPIISQIYSAWCDLKTV 65
AELIAI L+ + ++K+ +F + S S+ SL+A++N ++ P + I S +L
Sbjct: 6 AELIAIEQALIFIETMKDED--QFNICSYSLSSLTALSNCDITHPYLLSILSKQNNLVRK 63
Query: 66 GQYYVKLMWCPSHCGIRGNEAVDQAAKDPLLSPVIE 101
G+ V +WCPSH GI GNE D+ AK L+ PV +
Sbjct: 64 GKLVV-FVWCPSHLGILGNEVADRLAKQALVMPVTK 98
>gi|443700898|gb|ELT99633.1| hypothetical protein CAPTEDRAFT_212630, partial [Capitella teleta]
Length = 300
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 48/89 (53%), Gaps = 3/89 (3%)
Query: 9 AELIAI--LLCLRSIKNHPAMRFLLVSDSMGSLSAIANPYLSCPIISQIYSAWCDLKTVG 66
AEL+AI +L L + +FL+ +DS+ SL AI N + P + +I L G
Sbjct: 155 AELLAIYQVLTLLECSANDQQQFLIATDSLSSLQAIGNFNIKHPYVFKILQKCTLLHKKG 214
Query: 67 QYYVKLMWCPSHCGIRGNEAVDQAAKDPL 95
Y V + WCPSH G+ GNE D AK+ L
Sbjct: 215 IYLV-MAWCPSHVGVMGNERADLLAKEAL 242
>gi|443727119|gb|ELU14007.1| hypothetical protein CAPTEDRAFT_217934 [Capitella teleta]
Length = 664
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 34/89 (38%), Positives = 47/89 (52%), Gaps = 3/89 (3%)
Query: 9 AELIAI--LLCLRSIKNHPAMRFLLVSDSMGSLSAIANPYLSCPIISQIYSAWCDLKTVG 66
AEL+AI +L L + +FL+ +DS+ SL AI N + P + +I L G
Sbjct: 255 AELLAIYQVLTLLECSTNDQQQFLIATDSLSSLQAIGNFNIKHPYVFKILEKCTLLHKKG 314
Query: 67 QYYVKLMWCPSHCGIRGNEAVDQAAKDPL 95
V + WCPSH G+ GNE D AK+ L
Sbjct: 315 IDLV-MAWCPSHVGVMGNERADLLAKEAL 342
>gi|51950578|gb|AAA70222.2| putative ORF2 [Drosophila melanogaster]
Length = 1219
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 35/92 (38%), Positives = 50/92 (54%), Gaps = 5/92 (5%)
Query: 9 AELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAIANPYLSCPIISQIYSAWCDLKTVGQY 68
+E IAIL + KN +F++ SDS+ ++ +I N + S+I S L T
Sbjct: 987 SETIAILEAIELTKNRRG-KFIICSDSLSAVDSIQNTNNNSFYPSRIRS----LITQHAP 1041
Query: 69 YVKLMWCPSHCGIRGNEAVDQAAKDPLLSPVI 100
+K+MW P H GI+GNE DQAAK P+I
Sbjct: 1042 KIKIMWIPGHSGIKGNELADQAAKSASSMPLI 1073
>gi|241567430|ref|XP_002402293.1| conserved hypothetical protein [Ixodes scapularis]
gi|215501983|gb|EEC11477.1| conserved hypothetical protein [Ixodes scapularis]
Length = 345
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 32/90 (35%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
Query: 2 FHCSNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAIANPYLSCPIISQIYSAWCD 61
FH S+ AEL AI LR + P R +++SDS +L + + P+ + S
Sbjct: 101 FHASSTTAELAAIETGLRELFPWPPGRAVVLSDSRTALRHLLRTDDAPPLARSVVSLTLR 160
Query: 62 LKTVGQYYVKLMWCPSHCGIRGNEAVDQAA 91
L+ G + + W PSHCGI GNE D+ A
Sbjct: 161 LRDRG-WEIAFQWVPSHCGIPGNEEADKLA 189
>gi|331242858|ref|XP_003334074.1| hypothetical protein PGTG_15618 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 235
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 49/95 (51%), Gaps = 10/95 (10%)
Query: 9 AELIAILLCLRSIKNH------PAMRFL-LVSDSMGSLSAIANPYLSCP---IISQIYSA 58
AE+ AI + L IKN P+ + + SD+ +L IA P S I QI+
Sbjct: 72 AEVQAINIGLDIIKNEIQRNSLPSSNIINIFSDNQATLQVIAKPPRSSSNQAIFIQIFDK 131
Query: 59 WCDLKTVGQYYVKLMWCPSHCGIRGNEAVDQAAKD 93
L +V Q + L+WCP+H GI NE VDQ AK+
Sbjct: 132 LNYLISVHQASISLLWCPAHVGIPENEKVDQLAKE 166
>gi|331249470|ref|XP_003337352.1| hypothetical protein PGTG_19051 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 890
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 47/95 (49%), Gaps = 10/95 (10%)
Query: 9 AELIAILLCLRSIKNH-------PAMRFLLVSDSMGSLSAIANPYLSCPIIS---QIYSA 58
AE+ AI + L I N P + SD+ +L IANP LS S QI+
Sbjct: 665 AEVQAINIGLDIISNEAEKNNLPPFNNVNIFSDNQATLQVIANPPLSKSNQSTFIQIFDK 724
Query: 59 WCDLKTVGQYYVKLMWCPSHCGIRGNEAVDQAAKD 93
L T + + L+WCP+H GI NE VDQ AK+
Sbjct: 725 LNILITDFHFSISLLWCPAHVGIPENEKVDQLAKE 759
>gi|357621647|gb|EHJ73416.1| putative pol-like protein [Danaus plexippus]
Length = 1133
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
Query: 9 AELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAIA-NPYLS---CPIISQIYSAWCDLKT 64
AE IAIL + +++H ++ SDS L AIA NP++S P I +I ++
Sbjct: 902 AESIAILEAVSFVESHKLNNSIIFSDSKSCLQAIARNPFISKHNYPYILKIKDILFRCQS 961
Query: 65 VGQYYVKLMWCPSHCGIRGNEAVDQAAKD 93
V+L W PSH GI GNE VD AKD
Sbjct: 962 -SNIQVRLAWIPSHSGIHGNETVDYYAKD 989
>gi|90409437|ref|ZP_01217503.1| hypothetical protein PCNPT3_00010, partial [Psychromonas sp. CNPT3]
gi|90309457|gb|EAS37676.1| hypothetical protein PCNPT3_00010 [Psychromonas sp. CNPT3]
Length = 776
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 8/94 (8%)
Query: 4 CSNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAIANPYLSCPIISQIYSAWCDLK 63
C+ AEL AI L I P ++ + +DS+ ++ A+ P + SQ + ++
Sbjct: 663 CTVFTAELAAIFYALLLIAASPPDQYFIFTDSLSAIEALKTPR---AVKSQDFFIVKIIE 719
Query: 64 TVGQYY-----VKLMWCPSHCGIRGNEAVDQAAK 92
+G + + L+W PSHCGI GNE D AK
Sbjct: 720 LLGSLFDKAFRISLIWVPSHCGIPGNEKADSLAK 753
>gi|443699889|gb|ELT99143.1| hypothetical protein CAPTEDRAFT_215477 [Capitella teleta]
Length = 347
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 29/89 (32%), Positives = 48/89 (53%), Gaps = 6/89 (6%)
Query: 7 GIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAIANPYLSCPIISQIYSAWCDLKTVG 66
I E++ +L C S + + L+V+DS+ SL A+ N ++ P + +I + L G
Sbjct: 174 AIYEVLTLLECAASYE-----QILIVTDSLSSLQALGNFNITHPYVFKILEKYTILYNRG 228
Query: 67 QYYVKLMWCPSHCGIRGNEAVDQAAKDPL 95
+ + ++WCPSH G+ GN D AK L
Sbjct: 229 -FDLVMLWCPSHVGVVGNARADLLAKKAL 256
>gi|443734398|gb|ELU18400.1| hypothetical protein CAPTEDRAFT_213104 [Capitella teleta]
Length = 330
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 47/96 (48%), Gaps = 2/96 (2%)
Query: 9 AELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAIANPYLSCPIISQIYSAWCDLKTVGQY 68
AE AI CL + ++SDS+ L A+ N S +IS I A ++
Sbjct: 191 AEAKAIEACLMLLAQRQISPVTILSDSLSVLEAMQNTS-SSTVISDIQVA-LNVAANSNV 248
Query: 69 YVKLMWCPSHCGIRGNEAVDQAAKDPLLSPVIEKKI 104
V +W PSHCGI+GNEA D AK L S + + +
Sbjct: 249 DVSFLWIPSHCGIQGNEAADALAKASLSSQSVRESV 284
>gi|331216904|ref|XP_003321131.1| hypothetical protein PGTG_02173 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 672
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 36/95 (37%), Positives = 47/95 (49%), Gaps = 10/95 (10%)
Query: 9 AELIAILLCLRSIKNH-------PAMRFLLVSDSMGSLSAIANPYLSCPIIS---QIYSA 58
AE+ AI + L I N P + SD+ +L IANP LS S QI+
Sbjct: 447 AEVQAINIGLDIISNEAEKNNLPPFNNVNIFSDNQATLQVIANPPLSKSNQSTFIQIFDK 506
Query: 59 WCDLKTVGQYYVKLMWCPSHCGIRGNEAVDQAAKD 93
L T + + L+WCP+H GI NE VDQ AK+
Sbjct: 507 LNILITDFHFSISLLWCPAHVGIPENEKVDQLAKE 541
>gi|443723447|gb|ELU11866.1| hypothetical protein CAPTEDRAFT_187673 [Capitella teleta]
Length = 225
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 53/92 (57%), Gaps = 6/92 (6%)
Query: 9 AELIAILLCLRSIK-NHPAMRFLLVSDSMGSLSAIANPYLSCPIISQIYSAWCDLKTVGQ 67
+ELIAIL L+ ++ ++ +F++ SD++ ++ AI + P + ++ A +K++ Q
Sbjct: 113 SELIAILSALKCVEVDNEQHQFVICSDALSAIMAIHGMDVRHPYVLKVLYA---IKSIYQ 169
Query: 68 YY--VKLMWCPSHCGIRGNEAVDQAAKDPLLS 97
V MWCP H GI GNE D AK+ L S
Sbjct: 170 QEKIVVFMWCPPHVGIPGNEMADTLAKEALSS 201
>gi|443682433|gb|ELT87030.1| hypothetical protein CAPTEDRAFT_222606 [Capitella teleta]
Length = 619
Score = 48.5 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 31/84 (36%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
Query: 9 AELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAIANPYLSCPIISQIYSAWCDLKTVGQY 68
AELIAI L SI P F++ +DS S+ AI++ L + I +L +
Sbjct: 34 AELIAINETLTSIALLPYDEFVICTDSFSSILAISSIDLIHSYVQSILQKCTNLAGRDKR 93
Query: 69 YVKLMWCPSHCGIRGNEAVDQAAK 92
+ +WCPSH GI GNE D A+
Sbjct: 94 II-FIWCPSHVGIPGNETADTLAQ 116
>gi|11323019|emb|CAC16871.1| pol [Drosophila melanogaster]
Length = 1227
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 51/93 (54%), Gaps = 7/93 (7%)
Query: 9 AELIAIL-LCLRSIKNHPAMRFLLVSDSMGSLSAIANPYLSCPIISQIYSAWCDLKTVGQ 67
AE AIL C + KN A + ++ +DS+ SLSAI N + P ++ + +
Sbjct: 1002 AEAFAILKACQFASKN--AGKSVICTDSLSSLSAIRNWNHNDPTTQEVR----HILSSHP 1055
Query: 68 YYVKLMWCPSHCGIRGNEAVDQAAKDPLLSPVI 100
+ L+W PSH GI GNE D+AA++ L+P I
Sbjct: 1056 KKITLLWVPSHQGIHGNELADKAAQEMRLTPSI 1088
>gi|443730003|gb|ELU15698.1| hypothetical protein CAPTEDRAFT_201116 [Capitella teleta]
Length = 243
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Query: 33 SDSMGSLSAIANPYLSCPIISQIYSAWCDLKTVGQYYVKLMWCPSHCGIRGNEAVDQAAK 92
S ++ SL+A++N ++ P + I + +L G+ V +WCPSH GI GNE D+ AK
Sbjct: 103 SRTIRSLTALSNCDITHPYLLSILTKQNNLVRKGKLVV-FIWCPSHVGILGNEVADRLAK 161
Query: 93 DPLLSPVIE 101
L+ PV +
Sbjct: 162 QALVMPVTK 170
>gi|392596897|gb|EIW86219.1| hypothetical protein CONPUDRAFT_29773, partial [Coniophora
puteana RWD-64-598 SS2]
Length = 97
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 48/90 (53%), Gaps = 8/90 (8%)
Query: 9 AELIAILLCLRSIKNHPAMR----FLLVSDSMGSLSAIA--NPYLSCPIISQIYSAWCDL 62
AEL+++LL +K A R FL V DS ++ A +P ++ + A+ DL
Sbjct: 5 AELVSMLLAAHLLKRELARRQGRAFLGV-DSQAAIRATKGCSPTPGHYLVDAVTEAFEDL 63
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQAAK 92
+ G ++V++ W P H GI GNE D+ AK
Sbjct: 64 QDRG-HHVRVRWTPGHVGIDGNERADELAK 92
>gi|443706301|gb|ELU02423.1| hypothetical protein CAPTEDRAFT_206267 [Capitella teleta]
Length = 357
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 29/88 (32%), Positives = 47/88 (53%), Gaps = 5/88 (5%)
Query: 8 IAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAIANPYLSCPIISQIYSAWCDLKTVGQ 67
I +++ +L CL + + +FL+ ++S+ SL A+ N + P + +I L G
Sbjct: 260 IYQVLTLLECLANDQQ----QFLIATNSLSSLQALGNFNIKHPYVFKILEKCTLLHKKGI 315
Query: 68 YYVKLMWCPSHCGIRGNEAVDQAAKDPL 95
V + WCPSH G+ GNE D AK+ L
Sbjct: 316 DLV-ISWCPSHVGVMGNERADLLAKEAL 342
>gi|427791847|gb|JAA61375.1| Putative tick transposon, partial [Rhipicephalus pulchellus]
Length = 928
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 35/100 (35%), Positives = 53/100 (53%), Gaps = 9/100 (9%)
Query: 1 MFHCSNGIAELIAILLCLRSIKNHPAM-RFLLVSDSMGSLSAIANPYLSCPIISQIYSAW 59
++ S+ AEL+ I L I+ P + R + +DS +L +A + P+ ++ AW
Sbjct: 732 VYRASSTTAELVGIHLAADLIRESPQVSRAAIFTDSRSALRQLAKEDRAPPLAERV--AW 789
Query: 60 CDLKTVGQYY--VKLMWCPSHCGIRGNEAVD---QAAKDP 94
L ++ +Y V L W PSH GI GNEA D +AA DP
Sbjct: 790 -SLHSLREYGCDVALQWIPSHVGIAGNEAADDLAKAAHDP 828
>gi|83776064|dbj|BAE66183.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 1301
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 27/65 (41%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 31 LVSDSMGSLSAIANPYLSC--PIISQIYSAWCDLKTVGQYYVKLMWCPSHCGIRGNEAVD 88
++SDSM +L AIAN + I+ I+ A +LK G ++L W P HCG GNE D
Sbjct: 1050 ILSDSMSALQAIANAWNKSGQRILQAIHQAAGELKARG-IPLRLQWVPGHCGDPGNETAD 1108
Query: 89 QAAKD 93
+ AK+
Sbjct: 1109 RLAKE 1113
>gi|317159440|ref|XP_001827316.2| reverse transcriptase [Aspergillus oryzae RIB40]
Length = 1607
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 27/65 (41%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 31 LVSDSMGSLSAIANPYLSC--PIISQIYSAWCDLKTVGQYYVKLMWCPSHCGIRGNEAVD 88
++SDSM +L AIAN + I+ I+ A +LK G ++L W P HCG GNE D
Sbjct: 1356 ILSDSMSALQAIANAWNKSGQRILQAIHQAAGELKARG-IPLRLQWVPGHCGDPGNETAD 1414
Query: 89 QAAKD 93
+ AK+
Sbjct: 1415 RLAKE 1419
>gi|317156031|ref|XP_003190671.1| reverse transcriptase [Aspergillus oryzae RIB40]
Length = 1607
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 27/65 (41%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 31 LVSDSMGSLSAIANPYLSC--PIISQIYSAWCDLKTVGQYYVKLMWCPSHCGIRGNEAVD 88
++SDSM +L AIAN + I+ I+ A +LK G ++L W P HCG GNE D
Sbjct: 1356 ILSDSMSALQAIANAWNKSGQRILQAIHQAAGELKARG-IPLRLQWVPGHCGDPGNETAD 1414
Query: 89 QAAKD 93
+ AK+
Sbjct: 1415 RLAKE 1419
>gi|443720278|gb|ELU10076.1| hypothetical protein CAPTEDRAFT_219461 [Capitella teleta]
Length = 498
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 43/88 (48%), Gaps = 1/88 (1%)
Query: 8 IAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAIANPYLSCPIISQIYSAWCDLKTVGQ 67
AELIAI L SI P F++ +D + S+ AI++ L P + I C
Sbjct: 117 TAELIAINETLTSIALLPYDEFVICTDFLSSILAISSIDLIHPYVQSILQK-CTCLAGRD 175
Query: 68 YYVKLMWCPSHCGIRGNEAVDQAAKDPL 95
+ +WCPSH GI GNE D AK L
Sbjct: 176 KRIIFIWCPSHVGIPGNETADTVAKQAL 203
>gi|427798839|gb|JAA64871.1| Putative tick transposon, partial [Rhipicephalus pulchellus]
Length = 1220
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 30/87 (34%), Positives = 46/87 (52%), Gaps = 4/87 (4%)
Query: 9 AELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAIANPY---LSCPIISQIYSAWCDLKTV 65
AEL A+ + L I + A ++ + SDS +L ++ +P L ++ +I L
Sbjct: 973 AELAALRVALDFITDERAQKWAIFSDSKAALQSLLSPLRRGLHEQLVFEITEETHRLIEK 1032
Query: 66 GQYYVKLMWCPSHCGIRGNEAVDQAAK 92
G + + W PSHCGI GNE DQAA+
Sbjct: 1033 G-HQITFQWLPSHCGIIGNERADQAAR 1058
>gi|242821354|ref|XP_002487663.1| conserved hypothetical protein [Talaromyces stipitatus ATCC 10500]
gi|218712584|gb|EED12009.1| conserved hypothetical protein [Talaromyces stipitatus ATCC 10500]
Length = 282
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 42/76 (55%), Gaps = 6/76 (7%)
Query: 22 KNHPAMRFLLVSDSMGSLSAIANPY--LSCPIISQIYSAWCDLKTVGQYYVKLMWCPSHC 79
+ PA ++SDSM L A++N L II + + +L+T G ++L W P HC
Sbjct: 185 RQEPAT---ILSDSMSVLQALSNARNKLGQRIIQAVQQSVQELQTQG-IPLRLQWVPGHC 240
Query: 80 GIRGNEAVDQAAKDPL 95
G GNEA D+ AK+ +
Sbjct: 241 GDLGNEAADRLAKEAM 256
>gi|443713753|gb|ELU06453.1| hypothetical protein CAPTEDRAFT_215116 [Capitella teleta]
Length = 266
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 52/92 (56%), Gaps = 6/92 (6%)
Query: 9 AELIAILLCLRSIK-NHPAMRFLLVSDSMGSLSAIANPYLSCPIISQIYSAWCDLKTVGQ 67
+E+IAIL L+ ++ ++ +F++ SDS+ ++ AI + P + Q+ A +K++ Q
Sbjct: 113 SEIIAILSALKCLEADNEQHQFVICSDSLSAIMAIHGMDVHHPYVLQVLYA---IKSISQ 169
Query: 68 YY--VKLMWCPSHCGIRGNEAVDQAAKDPLLS 97
V MWCPSH GI GNE A+ L S
Sbjct: 170 QEKIVVFMWCPSHVGIPGNEMAHTLAEKALSS 201
>gi|427798201|gb|JAA64552.1| Putative tick transposon, partial [Rhipicephalus pulchellus]
Length = 1128
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 4/87 (4%)
Query: 9 AELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAIANPYLSCP---IISQIYSAWCDLKTV 65
AEL A+ L+ I + A ++ + SDS +L ++ +P P ++ +I L
Sbjct: 973 AELTALRAALQFISDERAQKWTIFSDSKAALQSLLSPLRRGPHEQLVFEIAEETHHLTEK 1032
Query: 66 GQYYVKLMWCPSHCGIRGNEAVDQAAK 92
G + + W PSHCGI GNE D+AA+
Sbjct: 1033 G-HELAFQWLPSHCGIIGNERADRAAR 1058
>gi|427798837|gb|JAA64870.1| Putative tick transposon, partial [Rhipicephalus pulchellus]
Length = 1174
Score = 47.8 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 4/87 (4%)
Query: 9 AELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAIANPYLSCP---IISQIYSAWCDLKTV 65
AEL A+ L+ I + A ++ + SDS +L ++ +P P ++ +I L
Sbjct: 973 AELTALRAALQFISDERAQKWTIFSDSKAALQSLLSPLRRGPHEQLVFEIAEETHHLTEK 1032
Query: 66 GQYYVKLMWCPSHCGIRGNEAVDQAAK 92
G + + W PSHCGI GNE D+AA+
Sbjct: 1033 G-HELAFQWLPSHCGIIGNERADRAAR 1058
>gi|427798001|gb|JAA64452.1| Putative tick transposon, partial [Rhipicephalus pulchellus]
Length = 1259
Score = 47.8 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 4/87 (4%)
Query: 9 AELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAIANPYLSCP---IISQIYSAWCDLKTV 65
AEL A+ L+ I + A ++ + SDS +L ++ +P P ++ +I L
Sbjct: 1012 AELTALRAALQFISDERAQKWTIFSDSKAALQSLLSPLRRGPHEQLVFEIAEETHHLTEK 1071
Query: 66 GQYYVKLMWCPSHCGIRGNEAVDQAAK 92
G + + W PSHCGI GNE D+AA+
Sbjct: 1072 G-HELAFQWLPSHCGIIGNERADRAAR 1097
>gi|154274349|ref|XP_001538026.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150415634|gb|EDN10987.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 1838
Score = 47.8 bits (112), Expect = 9e-04, Method: Composition-based stats.
Identities = 30/87 (34%), Positives = 46/87 (52%), Gaps = 3/87 (3%)
Query: 9 AELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAIANPYLSC--PIISQIYSAWCDLKTVG 66
AEL+ IL+ L I R + +D+ +L A+ NP S I+ +I A +++ G
Sbjct: 1568 AELLGILMGLNLILTSDRRRAAIFTDNQAALRALQNPRRSSGQSILRRIIDALERVRSQG 1627
Query: 67 QYYVKLMWCPSHCGIRGNEAVDQAAKD 93
V+ W P+H GI GNE D+ AK+
Sbjct: 1628 -LQVEFYWIPAHQGIEGNELADKLAKE 1653
>gi|358376822|dbj|GAA93326.1| reverse transcriptase [Aspergillus kawachii IFO 4308]
Length = 815
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 27/65 (41%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 31 LVSDSMGSLSAIANPYLSCP--IISQIYSAWCDLKTVGQYYVKLMWCPSHCGIRGNEAVD 88
++SDSM +L I N + II I+ + +LK G ++L W P HCG GNEA D
Sbjct: 585 ILSDSMSALQVIKNSWNKSGQCIIQAIHHSAGELKARG-IPLRLQWVPGHCGDPGNEAAD 643
Query: 89 QAAKD 93
+ AKD
Sbjct: 644 RLAKD 648
>gi|242797147|ref|XP_002482953.1| reverse transcriptase, putative [Talaromyces stipitatus ATCC 10500]
gi|218719541|gb|EED18961.1| reverse transcriptase, putative [Talaromyces stipitatus ATCC 10500]
Length = 1538
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 27/87 (31%), Positives = 45/87 (51%), Gaps = 2/87 (2%)
Query: 8 IAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAIANPYLSCP-IISQIYSAWCDLKTVG 66
+AEL+ I + L ++ + ++ DS ++ AI + I+ I W +L++ G
Sbjct: 1270 LAELVGIHMALEMVQQRIVRKMIIFYDSQAAIQAIDGAQKTGQQILGSIAEKWDELRSQG 1329
Query: 67 QYYVKLMWCPSHCGIRGNEAVDQAAKD 93
V + W P+H GI GNE D AAK+
Sbjct: 1330 -VQVTIHWIPAHQGIEGNERADIAAKE 1355
>gi|443686560|gb|ELT89792.1| hypothetical protein CAPTEDRAFT_191632 [Capitella teleta]
Length = 257
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 47/88 (53%), Gaps = 5/88 (5%)
Query: 8 IAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAIANPYLSCPIISQIYSAWCDLKTVGQ 67
I +++ +L CL + + +FL+ ++S+ SL A+ N + P + +I L G
Sbjct: 160 IYQVLTLLECLANDQQ----QFLIATNSLSSLQALGNFNIKHPYVFKILEKCTLLHKKGI 215
Query: 68 YYVKLMWCPSHCGIRGNEAVDQAAKDPL 95
V + WCPSH G+ GNE D AK+ L
Sbjct: 216 DLV-ISWCPSHVGVMGNERADLLAKEAL 242
>gi|427782519|gb|JAA56711.1| Putative tick transposon [Rhipicephalus pulchellus]
Length = 460
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 30/87 (34%), Positives = 46/87 (52%), Gaps = 4/87 (4%)
Query: 9 AELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAIANPY---LSCPIISQIYSAWCDLKTV 65
AEL A+ + L I + A ++ + SDS +L ++ +P L ++ +I L
Sbjct: 210 AELAALRVALDFITDERAQKWAIFSDSKAALQSLLSPLRRGLHEQLVFEITEETHRLIEK 269
Query: 66 GQYYVKLMWCPSHCGIRGNEAVDQAAK 92
G + + W PSHCGI GNE DQAA+
Sbjct: 270 G-HQITFQWLPSHCGIIGNERADQAAR 295
>gi|12657810|gb|AAK01033.1|AF301156_2 pol protein [Simian immunodeficiency virus]
Length = 990
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 32/88 (36%), Positives = 46/88 (52%), Gaps = 13/88 (14%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLSCPIISQIYSAWCDLK 63
SN AEL +LL L+ H R LV+DS+ +L I PY Q+ S+ ++
Sbjct: 608 SNQQAELTGVLLALK----HGPKRMNLVTDSLYALGIITGQPY------DQLPSSRGEII 657
Query: 64 TVG--QYYVKLMWCPSHCGIRGNEAVDQ 89
G + + + WCP+H GI GNE +DQ
Sbjct: 658 QAGMAKEAIHVAWCPAHKGIGGNELIDQ 685
>gi|154270239|ref|XP_001535976.1| hypothetical protein HCAG_09089 [Ajellomyces capsulatus NAm1]
gi|150410083|gb|EDN05471.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 832
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 37/105 (35%), Positives = 50/105 (47%), Gaps = 13/105 (12%)
Query: 3 HCSNGIAELIAIL----LCLRSIKN------HPAMRFLLVSDSMGSLSAIANP--YLSCP 50
H + AEL+AI L RS + H + ++SDS +L AIAN +
Sbjct: 558 HWTVTTAELLAIYHGLYLVWRSHSSEGTPPPHQHHTYTILSDSHTALRAIANSSKQVGGQ 617
Query: 51 IISQIYSAWCDLKTVGQYYVKLMWCPSHCGIRGNEAVDQAAKDPL 95
I+ I LK++G + L W P H GIRGNE DQ AK +
Sbjct: 618 IVQNILRTTKQLKSIG-IDLCLQWVPGHSGIRGNEMADQLAKQSI 661
>gi|427778603|gb|JAA54753.1| Putative tick transposon [Rhipicephalus pulchellus]
Length = 1397
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 49/97 (50%), Gaps = 12/97 (12%)
Query: 3 HCSNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAIA------NPYLSCPIISQIY 56
H S AE ILL + IK H R ++ +DS+ ++A++ NP + +++ ++
Sbjct: 1140 HTSIFTAEAYGILLIVEHIKQHMIRRSIIYTDSLSVVTALSCGKCSKNPVFN-KLLNNMH 1198
Query: 57 SAWCDLKTVGQYYVKLMWCPSHCGIRGNEAVDQAAKD 93
A+ + L W P H GI GNE VD+ A++
Sbjct: 1199 EAYNQ-----NLSIVLCWVPGHAGITGNEMVDKNARE 1230
>gi|331251535|ref|XP_003338362.1| hypothetical protein PGTG_20003 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 319
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 29/78 (37%), Positives = 37/78 (47%), Gaps = 5/78 (6%)
Query: 28 RFLLVSDSMGSLSAIANPYLSCP---IISQIYSAWCDLKTVGQYYVKLMWCPSHCGIRGN 84
R L++ D+ G L + +P P I QI + L VK WCP H I GN
Sbjct: 206 RILILVDNQGVLKRLNDPLAPKPGQKIFEQINLSLALLPD--HINVKFGWCPGHKDILGN 263
Query: 85 EAVDQAAKDPLLSPVIEK 102
E DQ AKD L SP ++
Sbjct: 264 EMADQLAKDALESPSTQR 281
>gi|302594740|gb|ADL59558.1| reverse transcriptase [Human immunodeficiency virus 1]
Length = 120
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 11/91 (12%)
Query: 1 MFHCSNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAIA-NPYLS-CPIISQIYSA 58
+ +N AEL+A+LL L+ K + +V+DS L I+ P S PI+ QI
Sbjct: 29 LEETTNQKAELMAVLLALQDSKE----KVNIVTDSQYVLGIISSQPTQSDSPIVQQIIEE 84
Query: 59 WCDLKTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ V L W P+H GI GNE +D+
Sbjct: 85 LTK-----KEKVYLTWVPAHKGIGGNEKIDK 110
>gi|950316|gb|AAA74495.1| unknown protein [Drosophila teissieri]
Length = 1234
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 33/92 (35%), Positives = 47/92 (51%), Gaps = 5/92 (5%)
Query: 9 AELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAIANPYLSCPIISQIYSAWCDLKTVGQY 68
+E IAIL + IK +F + DS+ ++ +I NP + ++I S L
Sbjct: 985 SETIAILEAIELIKTRRG-KFGIWFDSLSAIDSIKNPNNNSFYPNRIRSLITQLAP---- 1039
Query: 69 YVKLMWCPSHCGIRGNEAVDQAAKDPLLSPVI 100
+K+MW P H GI GNE DQAAK P+I
Sbjct: 1040 KIKIMWIPGHSGIIGNELADQAAKLASNMPLI 1071
>gi|338224345|gb|AEI88055.1| pol-like protein [Scylla paramamosain]
Length = 87
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 41/81 (50%), Gaps = 3/81 (3%)
Query: 3 HCSNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAIANPYLS--CPIISQIYSAWC 60
HCS EL+AILL L+ ++ +L +DS L A+ PY S +++ +
Sbjct: 7 HCSTLQTELVAILLALKHAQHRRERTVVLHTDSRTGLQALQQPYPSDNVGLVTATLGSLQ 66
Query: 61 DLKTVGQYYVKLMWCPSHCGI 81
L G+ V+L W PSH G+
Sbjct: 67 SLAAQGR-RVRLNWIPSHVGV 86
>gi|154276412|ref|XP_001539051.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150414124|gb|EDN09489.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 377
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 36/105 (34%), Positives = 51/105 (48%), Gaps = 13/105 (12%)
Query: 3 HCSNGIAELIAIL----LCLRSIKN------HPAMRFLLVSDSMGSLSAIANP--YLSCP 50
H + AEL+AI L RS + H + ++SDS +L AIAN +
Sbjct: 103 HWTVTTAELLAIYHGLYLVWRSHSSEGTPPPHQRHTYTILSDSRTALRAIANASKQVGGQ 162
Query: 51 IISQIYSAWCDLKTVGQYYVKLMWCPSHCGIRGNEAVDQAAKDPL 95
II I +L+++G + L W P H GI+GNE DQ AK +
Sbjct: 163 IIQNILHTTKELRSIG-VDLCLQWVPGHSGIKGNEMADQLAKQSI 206
>gi|154284203|ref|XP_001542897.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150411077|gb|EDN06465.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 1672
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 36/105 (34%), Positives = 51/105 (48%), Gaps = 13/105 (12%)
Query: 3 HCSNGIAELIAIL----LCLRSIKN------HPAMRFLLVSDSMGSLSAIANP--YLSCP 50
H + AEL+AI L RS + H + ++SDS +L AIAN +
Sbjct: 1398 HWTVTTAELLAIYHGLYLVWRSHSSEGTPPPHQRHTYTILSDSRTALRAIANASKQVGGQ 1457
Query: 51 IISQIYSAWCDLKTVGQYYVKLMWCPSHCGIRGNEAVDQAAKDPL 95
II I +L+++G + L W P H GI+GNE DQ AK +
Sbjct: 1458 IIQNILHTTKELRSIG-VDLCLQWVPGHSGIKGNEMADQLAKQSI 1501
>gi|443700141|gb|ELT99252.1| hypothetical protein CAPTEDRAFT_193728 [Capitella teleta]
Length = 337
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 25/63 (39%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 42 IANPYLSCPIISQIYSAWCDLKTVGQYYVKLMWCPSHCGIRGNEAVDQAAKDPLLSPVIE 101
I P L IIS I A ++ V +W PSHCGI+GNEA D AK L S ++
Sbjct: 17 ILTPVLRITIISDIQVA-LNVAANSNVDVSFLWIPSHCGIQGNEAADALAKASLSSQSVQ 75
Query: 102 KKI 104
+ +
Sbjct: 76 ESV 78
>gi|154274221|ref|XP_001537962.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150415570|gb|EDN10923.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 1671
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 35/97 (36%), Positives = 48/97 (49%), Gaps = 12/97 (12%)
Query: 3 HCSNGIAELIAIL--LCLRSIKNHPAMRFLLVSDSMGSLSAIANP--YLSCPIISQIYSA 58
H + AEL+AI L LR + ++SDS +L AIAN + I+ I
Sbjct: 1412 HGNVTTAELLAIYHGLYLRHT-------YTILSDSRAALRAIANSSKQVGGQIVQNILHT 1464
Query: 59 WCDLKTVGQYYVKLMWCPSHCGIRGNEAVDQAAKDPL 95
LK++G + L W P H GI+GNE DQ AK +
Sbjct: 1465 TKQLKSIG-VDLCLQWVPGHSGIKGNEMADQLAKQSI 1500
>gi|425780653|gb|EKV18659.1| hypothetical protein PDIG_09730 [Penicillium digitatum PHI26]
Length = 501
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 29/95 (30%), Positives = 44/95 (46%), Gaps = 7/95 (7%)
Query: 9 AELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAIANPYLSCP--IISQIYSAWCDLKTVG 66
AEL I + L K A ++ SDS ++ A+ NP I+++IY +++
Sbjct: 208 AELSGIEMALAKAKKEQAREVIIFSDSQAAIQAVQNPKRPSGQYILTRIYDHLRAIRSRN 267
Query: 67 QY-----YVKLMWCPSHCGIRGNEAVDQAAKDPLL 96
Q V + W P+H G+ GNE D AK L
Sbjct: 268 QVQQEPTIVTIRWIPAHVGVSGNEYADTEAKGAAL 302
>gi|427778015|gb|JAA54459.1| Putative tick transposon [Rhipicephalus pulchellus]
Length = 482
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 27/89 (30%), Positives = 43/89 (48%), Gaps = 4/89 (4%)
Query: 9 AELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAIANPYLSCPIISQIYSAWCDLKTVGQ- 67
AEL LCL + P ++ + SDS +L ++ + P ++ + T +
Sbjct: 231 AELAXXXLCL--VNREPPQKWSIFSDSKAALQSVLSALRRGPYEQLVFEIRYLIHTSHEK 288
Query: 68 -YYVKLMWCPSHCGIRGNEAVDQAAKDPL 95
++V W PSHCG+ GNE D AA+ L
Sbjct: 289 GHHVTFQWLPSHCGVIGNEHADNAARAAL 317
>gi|427779423|gb|JAA55163.1| Putative tick transposon [Rhipicephalus pulchellus]
Length = 435
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 4/87 (4%)
Query: 9 AELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAIANPY---LSCPIISQIYSAWCDLKTV 65
AEL A+ + L I + A ++ + SDS +L ++ +P L ++ +I L
Sbjct: 210 AELAALRVALDFITDERAQKWAIFSDSKAALQSLLSPLRRGLHEQLVFEITEETHRLIEK 269
Query: 66 GQYYVKLMWCPSHCGIRGNEAVDQAAK 92
G + + W PSHCGI GNE +QAA+
Sbjct: 270 G-HQITFQWLPSHCGIIGNERANQAAR 295
>gi|299745166|ref|XP_001831512.2| hypothetical protein CC1G_09041 [Coprinopsis cinerea
okayama7#130]
gi|298406463|gb|EAU90359.2| hypothetical protein CC1G_09041 [Coprinopsis cinerea
okayama7#130]
Length = 289
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 10/89 (11%)
Query: 11 LIAILLCLRSIKNHPAMRFL-LVSDSMGSLSAIANPYLSCPIISQIYS------AWCDLK 63
++ + + +PA+R + L +D+ ++++I +P P Q+YS A L
Sbjct: 1 MMGLTIATNIASQNPAIRHIYLYADNTAAITSIFDPK---PSGGQLYSRSFYETATKFLD 57
Query: 64 TVGQYYVKLMWCPSHCGIRGNEAVDQAAK 92
+ + ++ L WCPSH GI GNE VD+ AK
Sbjct: 58 SDPRNHIHLTWCPSHHGIPGNERVDRLAK 86
>gi|154270037|ref|XP_001535890.1| hypothetical protein HCAG_09166 [Ajellomyces capsulatus NAm1]
gi|150413780|gb|EDN09159.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 331
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 3/87 (3%)
Query: 9 AELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAIANPYLSC--PIISQIYSAWCDLKTVG 66
AEL+ IL+ L I R + +D+ +L A+ NP S I+ +I A +++ G
Sbjct: 58 AELLGILMGLNLILTSDRRRAAIFTDNQAALRALQNPRRSSGQSILRRIIDALERVRSQG 117
Query: 67 QYYVKLMWCPSHCGIRGNEAVDQAAKD 93
V+ W P+H GI GNE D+ A +
Sbjct: 118 -LQVEFYWIPAHQGIEGNELADKLAME 143
>gi|154271075|ref|XP_001536391.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150409614|gb|EDN05058.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 1139
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 3/87 (3%)
Query: 9 AELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAIANPYLSC--PIISQIYSAWCDLKTVG 66
AEL+ IL+ L I R + +D+ +L A+ NP S I+ +I A +++ G
Sbjct: 866 AELLGILMGLNLILTSDRRRAAIFTDNQAALRALQNPRRSSGQSILRRIIDALERVRSQG 925
Query: 67 QYYVKLMWCPSHCGIRGNEAVDQAAKD 93
V+ W P+H GI GNE D+ A +
Sbjct: 926 -LQVEFYWIPAHQGIEGNELADKLAME 951
>gi|154278122|ref|XP_001539883.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150413468|gb|EDN08851.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 765
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 35/105 (33%), Positives = 51/105 (48%), Gaps = 13/105 (12%)
Query: 3 HCSNGIAELIAIL----LCLRSIKN------HPAMRFLLVSDSMGSLSAIANP--YLSCP 50
H + AEL+AI L RS + H + ++SDS +L AIAN +
Sbjct: 491 HWTVTTAELLAIYHGLYLVWRSHSSEGTPTPHQRHTYTILSDSRTALRAIANSSKQVGGQ 550
Query: 51 IISQIYSAWCDLKTVGQYYVKLMWCPSHCGIRGNEAVDQAAKDPL 95
I+ I +L+++G + L W P H GI+GNE DQ AK +
Sbjct: 551 IVQNILHTTKELRSIG-VDLCLQWVPGHSGIKGNEMADQLAKQSI 594
>gi|83775366|dbj|BAE65488.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 1187
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 9/89 (10%)
Query: 9 AELIAILLCLRSIK--NHPAMRFLLVSDSMGSLSAIANPYLSCP--IISQIYSAWCDLKT 64
EL I + L ++ PA F+ DS ++ AI NP I+ QIY + +
Sbjct: 933 GELTGIRMALHRLRRETRPATVFV---DSQAAIQAIQNPRRPSGQYILDQIY--YIIRRY 987
Query: 65 VGQYYVKLMWCPSHCGIRGNEAVDQAAKD 93
Q V++ W P+H G+ GNEA D+AA++
Sbjct: 988 NMQNRVQIHWIPAHIGVPGNEAADEAARE 1016
>gi|317157858|ref|XP_001826621.2| reverse transcriptase [Aspergillus oryzae RIB40]
Length = 1012
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 9/89 (10%)
Query: 9 AELIAILLCLRSIK--NHPAMRFLLVSDSMGSLSAIANPYLSCP--IISQIYSAWCDLKT 64
EL I + L ++ PA F+ DS ++ AI NP I+ QIY + +
Sbjct: 758 GELTGIRMALHRLRRETRPATVFV---DSQAAIQAIQNPRRPSGQYILDQIY--YIIRRY 812
Query: 65 VGQYYVKLMWCPSHCGIRGNEAVDQAAKD 93
Q V++ W P+H G+ GNEA D+AA++
Sbjct: 813 NMQNRVQIHWIPAHIGVPGNEAADEAARE 841
>gi|317033408|ref|XP_001395701.2| reverse transcriptase [Aspergillus niger CBS 513.88]
Length = 1618
Score = 44.7 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 28/76 (36%), Positives = 40/76 (52%), Gaps = 6/76 (7%)
Query: 19 RSIKNHPAMRFLLVSDSMGSLSAIANPYLSC--PIISQIYSAWCDLKTVGQYYVKLMWCP 76
R+ PA ++SDSM +L I N + II I+ + +L+ G ++L W P
Sbjct: 1358 RATDAEPAT---ILSDSMSALQVIKNSWNKSGQRIIQAIHQSAGELRARG-IPLRLQWVP 1413
Query: 77 SHCGIRGNEAVDQAAK 92
HCG GNEA D+ AK
Sbjct: 1414 GHCGNPGNEAADRLAK 1429
>gi|134080425|emb|CAK41174.1| unnamed protein product [Aspergillus niger]
Length = 1288
Score = 44.7 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 28/76 (36%), Positives = 40/76 (52%), Gaps = 6/76 (7%)
Query: 19 RSIKNHPAMRFLLVSDSMGSLSAIANPYLSC--PIISQIYSAWCDLKTVGQYYVKLMWCP 76
R+ PA ++SDSM +L I N + II I+ + +L+ G ++L W P
Sbjct: 1028 RATDAEPAT---ILSDSMSALQVIKNSWNKSGQRIIQAIHQSAGELRARG-IPLRLQWVP 1083
Query: 77 SHCGIRGNEAVDQAAK 92
HCG GNEA D+ AK
Sbjct: 1084 GHCGNPGNEAADRLAK 1099
>gi|427780715|gb|JAA55809.1| Putative tick transposon [Rhipicephalus pulchellus]
Length = 481
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 28/94 (29%), Positives = 44/94 (46%), Gaps = 10/94 (10%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAIANPYLSCPIISQIYSAWCDLKT 64
S+ AEL AI L + P + + SDS +L I +P+ P + D++
Sbjct: 227 SSTAAELTAIRAALEFVVKEPPQAWSIFSDSKAALQCIMSPFRRGPNEQLV----ADIRI 282
Query: 65 V------GQYYVKLMWCPSHCGIRGNEAVDQAAK 92
+ Q+ + W P HCGI GN+ D+AA+
Sbjct: 283 LHHRAVEKQHNIVYQWIPGHCGIYGNDRADEAAR 316
>gi|331229368|ref|XP_003327350.1| hypothetical protein PGTG_09899 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 1673
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 33/95 (34%), Positives = 45/95 (47%), Gaps = 8/95 (8%)
Query: 5 SNGIAELIAILLCLRSIKN-----HPAM--RFLLVSDSMGSLSAIANPYLSCPIISQIYS 57
SN AELI I L +R K P R + D+ G+L+ A+P S P
Sbjct: 1406 SNYEAELIGIRLAIRLAKRIIWSAWPGKFNRVAIFGDNQGALTQTADPLQSSPGQHIYAD 1465
Query: 58 AWCDLKTVGQYYVKLMWCPSHCGIRGNEAVDQAAK 92
+ L+++G V L WCP H G+ NE D+ AK
Sbjct: 1466 NFSSLRSLG-IPVALYWCPGHEGLAANEQADKLAK 1499
>gi|391865317|gb|EIT74602.1| reverse transcriptase [Aspergillus oryzae 3.042]
Length = 428
Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 29/89 (32%), Positives = 46/89 (51%), Gaps = 9/89 (10%)
Query: 9 AELIAILLCLRSIKNH--PAMRFLLVSDSMGSLSAIANPYLSCP--IISQIYSAWCDLKT 64
EL I + L ++ PA F+ DS ++ A+ NP I+ QIY + +
Sbjct: 179 GELTGIRMALHKLRKEKTPATIFV---DSQAAIQAVQNPRRPSGQYILDQIY--YIIRRY 233
Query: 65 VGQYYVKLMWCPSHCGIRGNEAVDQAAKD 93
Q V++ W P+H G+ GNEA D+AA++
Sbjct: 234 NMQNRVQIRWIPAHIGVPGNEAADEAARE 262
>gi|358376676|dbj|GAA93209.1| reverse transcriptase [Aspergillus kawachii IFO 4308]
Length = 378
Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 28/76 (36%), Positives = 40/76 (52%), Gaps = 6/76 (7%)
Query: 19 RSIKNHPAMRFLLVSDSMGSLSAIANPYLSC--PIISQIYSAWCDLKTVGQYYVKLMWCP 76
R+ PA ++SDSM +L I N + II I+ + +L+ G ++L W P
Sbjct: 118 RATDAEPAT---ILSDSMSALQVIKNSWNKSGQRIIQAIHQSAGELRARG-IPLQLQWVP 173
Query: 77 SHCGIRGNEAVDQAAK 92
HCG GNEA D+ AK
Sbjct: 174 GHCGNPGNEAADRLAK 189
>gi|242814149|ref|XP_002486313.1| reverse transcriptase, putative [Talaromyces stipitatus ATCC 10500]
gi|218714652|gb|EED14075.1| reverse transcriptase, putative [Talaromyces stipitatus ATCC 10500]
Length = 1193
Score = 44.3 bits (103), Expect = 0.008, Method: Composition-based stats.
Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 31 LVSDSMGSLSAIANPYLSC--PIISQIYSAWCDLKTVGQYYVKLMWCPSHCGIRGNEAVD 88
++SDSM +L AI+N II + + +LK G ++L W P HCG GNEA D
Sbjct: 958 ILSDSMSALQAISNARNKSGQRIIQAVRQSARELKARG-IPLRLQWVPGHCGDPGNEAAD 1016
Query: 89 QAAKD 93
+ AK+
Sbjct: 1017 RLAKE 1021
>gi|358376556|dbj|GAA93101.1| reverse transcriptase [Aspergillus kawachii IFO 4308]
Length = 922
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 35/108 (32%), Positives = 48/108 (44%), Gaps = 19/108 (17%)
Query: 1 MFHCSNGIAELIAILLCLRSIKN-------------HPAMRFLLVSDSMGSLSAIANPYL 47
M H S AEL+AI + + HPA ++SDSM +L AI NP
Sbjct: 664 MEHWSVYAAELMAIFYAISLVLQVTQKRQSQSDKVEHPAT---ILSDSMSALQAIRNPSN 720
Query: 48 SC--PIISQIYSAWCDLKTVGQYYVKLMWCPSHCGIRGNEAVDQAAKD 93
I I A ++K G ++L W P HC GN+ D+ AK+
Sbjct: 721 RSGQRTIRAILQAASEMKARG-IPIRLQWVPGHCNDPGNDEADRLAKE 767
>gi|154280491|ref|XP_001541058.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150411237|gb|EDN06625.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 1765
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 3/87 (3%)
Query: 9 AELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAIANPYLSC--PIISQIYSAWCDLKTVG 66
AEL+ I + L I R + +D+ +L A+ NP S I+ +I A +++ G
Sbjct: 1492 AELLGIHMGLNLILASDRRRAAIFTDNQAALKALQNPRRSSGQSILRRIIDALDRVRSQG 1551
Query: 67 QYYVKLMWCPSHCGIRGNEAVDQAAKD 93
V+ W P+H GI GNE D AK+
Sbjct: 1552 -LQVEFYWIPAHQGIEGNELADNLAKE 1577
>gi|154283453|ref|XP_001542522.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150410702|gb|EDN06090.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 1683
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 3/87 (3%)
Query: 9 AELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAIANPYLSC--PIISQIYSAWCDLKTVG 66
AEL+ I + L I R + +D+ +L A+ NP S I+ +I A +++ G
Sbjct: 1478 AELLGIHMGLNLILASDRRRAAIFTDNQAALKALQNPRRSSGQSILRRIIDALDRVRSQG 1537
Query: 67 QYYVKLMWCPSHCGIRGNEAVDQAAKD 93
V+ W P+H GI GNE D AK+
Sbjct: 1538 -LQVEFYWIPAHQGIEGNELADNLAKE 1563
>gi|37935980|gb|AAO47217.1| pol protein [Human immunodeficiency virus 1]
Length = 1027
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 36/92 (39%), Positives = 51/92 (55%), Gaps = 12/92 (13%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAIAN-PYLS-CPIISQIYSAWCDL 62
+N AEL+AILL L+ K + +V+DS +L I++ P S PI+ QI +L
Sbjct: 642 TNQKAELMAILLALQDSKE----KVNIVTDSQYALGIISSQPTQSESPIVQQIIE---EL 694
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ-AAKD 93
Q Y L W P+H GI GNE +D+ +KD
Sbjct: 695 TRKEQVY--LAWVPAHKGIGGNEKIDKLVSKD 724
>gi|427779397|gb|JAA55150.1| Putative tick transposon [Rhipicephalus pulchellus]
Length = 425
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 4/87 (4%)
Query: 9 AELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAIANPY---LSCPIISQIYSAWCDLKTV 65
AEL A+ + L I + A ++ + SDS +L ++ +P L ++ +I L
Sbjct: 210 AELAALRVALDFITDERAQKWAIFSDSKAALQSLLSPLRRGLHEQLVFEITEETHRLIEK 269
Query: 66 GQYYVKLMWCPSHCGIRGNEAVDQAAK 92
G + + W SHCGI GNE DQAA+
Sbjct: 270 G-HQITFQWLTSHCGIIGNERADQAAR 295
>gi|37935888|gb|AAP42147.1| pol protein [Human immunodeficiency virus 1]
Length = 1009
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 35/92 (38%), Positives = 49/92 (53%), Gaps = 12/92 (13%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAIAN-PYLS-CPIISQIYSAWCDL 62
+N AELIAILL L+ K +V+DS +L I++ P S PI+ QI
Sbjct: 624 TNQKAELIAILLALQDSKKEVN----IVTDSQYALGIISSQPTQSDSPIVQQIIE----- 674
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ-AAKD 93
+ + V L W P+H GI GNE +D+ +KD
Sbjct: 675 EMTKKERVYLTWVPAHKGIGGNEKIDKLVSKD 706
>gi|37935931|gb|AAO47173.1| pol protein [Human immunodeficiency virus 1]
Length = 1010
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 36/92 (39%), Positives = 51/92 (55%), Gaps = 12/92 (13%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAIAN-PYLS-CPIISQIYSAWCDL 62
+N AEL+AILL L+ K + +V+DS +L I++ P S PI+ QI +L
Sbjct: 625 TNQKAELMAILLALQDSKE----QVNIVTDSQYALGIISSQPTQSDSPIVQQIIE---EL 677
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ-AAKD 93
Q Y L W P+H GI GNE +D+ +KD
Sbjct: 678 TKKEQVY--LTWVPAHKGIGGNEKIDKLVSKD 707
>gi|3776305|gb|AAC64711.1| reverse transcriptase [Human immunodeficiency virus 1]
Length = 560
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 35/92 (38%), Positives = 51/92 (55%), Gaps = 12/92 (13%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAIAN-PYLS-CPIISQIYSAWCDL 62
+N AEL+A+LL L+ K + +V+DS +L I++ P S PI+ QI +L
Sbjct: 473 TNQKAELMAVLLALQDSKE----KVNIVTDSQYALGIISSQPTQSESPIVQQIIE---EL 525
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ-AAKD 93
Q Y L W P+H GI GNE +D+ +KD
Sbjct: 526 TKKEQVY--LTWVPAHKGIGGNEKIDKLVSKD 555
>gi|241259186|ref|XP_002404809.1| hypothetical protein IscW_ISCW017984 [Ixodes scapularis]
gi|215496710|gb|EEC06350.1| hypothetical protein IscW_ISCW017984 [Ixodes scapularis]
Length = 115
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Query: 3 HCSNGIAELIAILLCLRSIKNHPAMR-FLLVSDSMGSLSAIANPYLSCPIISQIYSAWCD 61
H ++ AEL A L LR ++ ++++SDS +L+ + + + P+ + D
Sbjct: 20 HATSTTAELAATDLPLRVVEADAGTSSWVIISDSQAALAQLDDLTAALPLARLLADLTVD 79
Query: 62 LKTVGQYYVKLMWCPSHCGIRGNEAVDQAAK 92
+ G++ + W P H G+ GN VD+ A+
Sbjct: 80 IGQAGRHRLAFQWIPGHFGLPGNAEVDRIAE 110
>gi|238508578|ref|XP_002385478.1| reverse transcriptase, putative [Aspergillus flavus NRRL3357]
gi|220688370|gb|EED44723.1| reverse transcriptase, putative [Aspergillus flavus NRRL3357]
Length = 1312
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 29/89 (32%), Positives = 45/89 (50%), Gaps = 9/89 (10%)
Query: 9 AELIAILLCLRSIKNH--PAMRFLLVSDSMGSLSAIANPYLSCP--IISQIYSAWCDLKT 64
EL I + L ++ PA F+ DS ++ A+ NP I+ QIY
Sbjct: 1053 GELTGIRMALHRLRKETRPATVFV---DSEAAIQAVQNPRRPSGQYILDQIYYIVRRYNM 1109
Query: 65 VGQYYVKLMWCPSHCGIRGNEAVDQAAKD 93
G+ V++ W P+H G+ GNEA D+AA++
Sbjct: 1110 QGR--VQIRWIPAHIGVPGNEAADEAARE 1136
>gi|427791527|gb|JAA61215.1| Putative tick transposon, partial [Rhipicephalus pulchellus]
Length = 1298
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 2/87 (2%)
Query: 9 AELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAIANPYLSCPIISQIYSAWCDLKTVGQ- 67
+EL A+ + IK PA R+ + DS +L +++ ++ L V +
Sbjct: 1003 SELAALRGAVNHIKEQPANRWAVFCDSKAALQCLSSALRRGSYEQLVWEIREMLHNVTEQ 1062
Query: 68 -YYVKLMWCPSHCGIRGNEAVDQAAKD 93
+ V W PSHCGI GN+ D+AA++
Sbjct: 1063 GHDVVFQWLPSHCGISGNDLADEAARE 1089
>gi|443694523|gb|ELT95634.1| hypothetical protein CAPTEDRAFT_227708 [Capitella teleta]
Length = 364
Score = 43.5 bits (101), Expect = 0.016, Method: Composition-based stats.
Identities = 34/87 (39%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Query: 9 AELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAIANPYLSCPIISQIYSAWCDLKTVGQY 68
AELIAI L SI P F++ +DS+ S+ AI++ L P + I C
Sbjct: 6 AELIAINETLTSIALLPYDEFVICTDSLSSILAISSIDLIHPYVQSILQK-CTCLAGRDK 64
Query: 69 YVKLMWCPSHCGIRGNEAVDQAAKDPL 95
+ +WCPSH GI GNE D AK L
Sbjct: 65 RIIFIWCPSHVGIPGNETADTLAKQAL 91
>gi|154272339|ref|XP_001537022.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150409009|gb|EDN04465.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 510
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 3/87 (3%)
Query: 9 AELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAIANPYLSC--PIISQIYSAWCDLKTVG 66
AEL+ I + L I R + +D+ +L A+ NP S I+ +I A ++ G
Sbjct: 237 AELLGIHMGLNLILASDRRRAAIFTDNQAALKALQNPRRSSGQSILRRIIDALDRVRAQG 296
Query: 67 QYYVKLMWCPSHCGIRGNEAVDQAAKD 93
V+ W P+H GI GNE D AK+
Sbjct: 297 -LQVEFYWIPAHQGIEGNELADNLAKE 322
>gi|154284199|ref|XP_001542895.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150411075|gb|EDN06463.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 1776
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 3/87 (3%)
Query: 9 AELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAIANPYLSC--PIISQIYSAWCDLKTVG 66
AEL+ I + L I R + +D+ +L A+ NP S I+ +I A ++ G
Sbjct: 1503 AELLGIHMGLNLILASDRRRAAIFTDNQAALKALQNPRRSSGQSILRRIIDALDRVRAQG 1562
Query: 67 QYYVKLMWCPSHCGIRGNEAVDQAAKD 93
V+ W P+H GI GNE D AK+
Sbjct: 1563 -LQVEFYWIPAHQGIEGNELADNLAKE 1588
>gi|154272341|ref|XP_001537023.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150409010|gb|EDN04466.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 1765
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 3/87 (3%)
Query: 9 AELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAIANPYLSC--PIISQIYSAWCDLKTVG 66
AEL+ I + L I R + +D+ +L A+ NP S I+ +I A ++ G
Sbjct: 1492 AELLGIHMGLNLILASDRRRAAIFTDNQAALKALQNPRRSSGQSILRRIIDALDRVRAQG 1551
Query: 67 QYYVKLMWCPSHCGIRGNEAVDQAAKD 93
V+ W P+H GI GNE D AK+
Sbjct: 1552 -LQVEFYWIPAHQGIEGNELADNLAKE 1577
>gi|255931687|ref|XP_002557400.1| Pc12g05560 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211582019|emb|CAP80183.1| Pc12g05560 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 334
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 33/97 (34%), Positives = 45/97 (46%), Gaps = 13/97 (13%)
Query: 9 AELIAILLCLRSIKNHPAMRFLL----------VSDSMGSLSAIANP--YLSCPIISQIY 56
AELI IL + + + R L +SDSM +L AI P II I
Sbjct: 57 AELIGILHAIEIVNKVASERRRLHGEQVRLATILSDSMSALQAIQTPGNKSGQRIIHAIL 116
Query: 57 SAWCDLKTVGQYYVKLMWCPSHCGIRGNEAVDQAAKD 93
A + KT G ++L W P HC GN++ D+ AK+
Sbjct: 117 QAAINSKTHG-VTIRLQWIPGHCAAPGNDSADRLAKE 152
>gi|992561|gb|AAA99879.1| pol polyprotein, partial [Human immunodeficiency virus 1]
Length = 1027
Score = 43.5 bits (101), Expect = 0.018, Method: Composition-based stats.
Identities = 36/92 (39%), Positives = 50/92 (54%), Gaps = 12/92 (13%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAIAN-PYLS-CPIISQIYSAWCDL 62
+N AEL+AILL L+ K +V+DS +L I++ P S PI+ QI +L
Sbjct: 642 TNQKAELMAILLALQDSKE----TVNIVTDSQYALGVISSQPTQSESPIVQQIIE---EL 694
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ-AAKD 93
Q Y L W P+H GI GNE +D+ +KD
Sbjct: 695 TKKEQVY--LTWVPAHKGIGGNEKIDKLVSKD 724
>gi|110815940|sp|Q77373.3|POL_HV1AN RecName: Full=Gag-Pol polyprotein; AltName: Full=Pr160Gag-Pol;
Contains: RecName: Full=Matrix protein p17; Short=MA;
Contains: RecName: Full=Capsid protein p24; Short=CA;
Contains: RecName: Full=Spacer peptide p2; Contains:
RecName: Full=Nucleocapsid protein p7; Short=NC;
Contains: RecName: Full=Transframe peptide; Short=TF;
Contains: RecName: Full=p6-pol; Short=p6*; Contains:
RecName: Full=Protease; AltName: Full=PR; AltName:
Full=Retropepsin; Contains: RecName: Full=Reverse
transcriptase/ribonuclease H; AltName:
Full=Exoribonuclease H; AltName: Full=p66 RT; Contains:
RecName: Full=p51 RT; Contains: RecName: Full=p15;
Contains: RecName: Full=Integrase; Short=IN
Length = 1435
Score = 43.5 bits (101), Expect = 0.018, Method: Composition-based stats.
Identities = 36/92 (39%), Positives = 50/92 (54%), Gaps = 12/92 (13%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAIAN-PYLS-CPIISQIYSAWCDL 62
+N AEL+AILL L+ K +V+DS +L I++ P S PI+ QI +L
Sbjct: 1059 TNQKAELMAILLALQDSKE----TVNIVTDSQYALGVISSQPTQSESPIVQQIIE---EL 1111
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ-AAKD 93
Q Y L W P+H GI GNE +D+ +KD
Sbjct: 1112 TKKEQVY--LTWVPAHKGIGGNEKIDKLVSKD 1141
>gi|328697220|ref|XP_001949504.2| PREDICTED: hypothetical protein LOC100162931 [Acyrthosiphon pisum]
Length = 1915
Score = 43.1 bits (100), Expect = 0.018, Method: Composition-based stats.
Identities = 31/96 (32%), Positives = 45/96 (46%), Gaps = 2/96 (2%)
Query: 4 CSNGIAELIAILLCLR-SIKNHPAMRFLLVSDSMGSLSAIANPYLSCPIISQIYSAWCDL 62
CS AE +AIL + +I + SDS+ +L+++ N Y I+ +I +
Sbjct: 986 CSIYTAETLAILKAIEFTISEINDSNITIFSDSLSALTSLQNLYSPSDIVRKIQNTHYIP 1045
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQAAKDPLLSP 98
K + + W P HC I GNE D AAK SP
Sbjct: 1046 KQQDKN-ITYSWVPGHCNIDGNELADSAAKLAHSSP 1080
>gi|37935970|gb|AAO47208.1| pol protein [Human immunodeficiency virus 1]
Length = 1009
Score = 43.1 bits (100), Expect = 0.020, Method: Composition-based stats.
Identities = 36/92 (39%), Positives = 50/92 (54%), Gaps = 12/92 (13%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAIAN-PYLS-CPIISQIYSAWCDL 62
+N AEL+AILL L+ K +V+DS +L I++ P S PI+ QI +L
Sbjct: 624 TNQKAELMAILLALKDSKE----TVNIVTDSQFALGIISSQPTQSDSPIVQQIIE---EL 676
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ-AAKD 93
Q Y L W P+H GI GNE +D+ +KD
Sbjct: 677 TKKEQVY--LAWVPAHKGIGGNEKIDKLVSKD 706
>gi|427781947|gb|JAA56425.1| Putative tick transposon [Rhipicephalus pulchellus]
Length = 455
Score = 43.1 bits (100), Expect = 0.020, Method: Composition-based stats.
Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 2/87 (2%)
Query: 9 AELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAIANPYLSCPIISQIYSAWCDLKTVGQ- 67
+EL A+ + IK PA R+ + DS +L +++ ++ L V +
Sbjct: 205 SELAALRGAVNHIKEQPANRWAVFCDSKAALQCLSSALRRGSYEQLVWEIREMLHNVTEQ 264
Query: 68 -YYVKLMWCPSHCGIRGNEAVDQAAKD 93
+ V W PSHCGI GN+ D+AA++
Sbjct: 265 GHDVVFQWLPSHCGISGNDLADEAARE 291
>gi|427779393|gb|JAA55148.1| Putative tick transposon [Rhipicephalus pulchellus]
Length = 424
Score = 43.1 bits (100), Expect = 0.021, Method: Composition-based stats.
Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 2/87 (2%)
Query: 9 AELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAIANPYLSCPIISQIYSAWCDLKTVGQ- 67
+EL A+ + IK PA R+ + DS +L +++ ++ L V +
Sbjct: 205 SELAALRGAVNHIKEQPANRWAVFCDSKAALQCLSSALRRGSYEQLVWEIREMLHNVTEQ 264
Query: 68 -YYVKLMWCPSHCGIRGNEAVDQAAKD 93
+ V W PSHCGI GN+ D+AA++
Sbjct: 265 GHDVVFQWLPSHCGISGNDLADEAARE 291
>gi|51599131|gb|AAU08216.1| pol protein [Human immunodeficiency virus 1]
Length = 1007
Score = 43.1 bits (100), Expect = 0.021, Method: Composition-based stats.
Identities = 36/92 (39%), Positives = 50/92 (54%), Gaps = 12/92 (13%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAIAN-PYLS-CPIISQIYSAWCDL 62
+N AEL+AILL L+ K +V+DS +L I++ P S PI+ QI +L
Sbjct: 622 TNQKAELMAILLALQDSKK----TVNIVTDSQYALGIISSQPTQSESPIVQQIIE---EL 674
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ-AAKD 93
Q Y L W P+H GI GNE +D+ +KD
Sbjct: 675 TKKDQVY--LAWVPAHKGIGGNEKIDKLVSKD 704
>gi|427780533|gb|JAA55718.1| Putative tick transposon, partial [Rhipicephalus pulchellus]
Length = 380
Score = 43.1 bits (100), Expect = 0.021, Method: Composition-based stats.
Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 2/87 (2%)
Query: 9 AELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAIANPYLSCPIISQIYSAWCDLKTVGQ- 67
+EL A+ + IK PA R+ + DS +L +++ ++ L V +
Sbjct: 205 SELAALRGAVNHIKEQPANRWAVFCDSKAALQCLSSALRRGSYEQLVWEIREMLHNVTEQ 264
Query: 68 -YYVKLMWCPSHCGIRGNEAVDQAAKD 93
+ V W PSHCGI GN+ D+AA++
Sbjct: 265 GHDVVFQWLPSHCGISGNDLADEAARE 291
>gi|242768198|ref|XP_002341520.1| conserved hypothetical protein [Talaromyces stipitatus ATCC
10500]
gi|218724716|gb|EED24133.1| conserved hypothetical protein [Talaromyces stipitatus ATCC
10500]
Length = 200
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Query: 34 DSMGSLSAI-ANPYLSCPIISQIYSAWCDLKTVGQYYVKLMWCPSHCGIRGNEAVDQAAK 92
DS ++ AI I+ I W +L+ G V + W P+H GI GNE D+AAK
Sbjct: 19 DSQAAIQAIDGTQKTGQQILGSIAEKWDELRNQG-VQVSIHWIPTHQGIEGNERADRAAK 77
Query: 93 D 93
+
Sbjct: 78 E 78
>gi|427781803|gb|JAA56353.1| Putative tick transposon [Rhipicephalus pulchellus]
Length = 455
Score = 43.1 bits (100), Expect = 0.022, Method: Composition-based stats.
Identities = 29/96 (30%), Positives = 46/96 (47%), Gaps = 4/96 (4%)
Query: 9 AELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAIANPYLSCP---IISQIYSAWCDLKTV 65
AEL A+ LR I +++ + +DS +L + P ++ +I + L
Sbjct: 205 AELAALRSALRRIDREVPLKWSIFTDSKPALQCLRTALRRGPQDQLLLEIRQLYHQLTDK 264
Query: 66 GQYYVKLMWCPSHCGIRGNEAVDQAAKDPLLSPVIE 101
G + + W P HCGI GNE D AAK+ + V+E
Sbjct: 265 G-HDITFQWLPGHCGITGNEHADDAAKNAHENGVME 299
>gi|427779533|gb|JAA55218.1| Putative tick transposon [Rhipicephalus pulchellus]
Length = 482
Score = 43.1 bits (100), Expect = 0.022, Method: Composition-based stats.
Identities = 29/96 (30%), Positives = 46/96 (47%), Gaps = 4/96 (4%)
Query: 9 AELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAIANPYLSCP---IISQIYSAWCDLKTV 65
AEL A+ LR I +++ + +DS +L + P ++ +I + L
Sbjct: 232 AELAALRSALRRIDREVPLKWSIFTDSKPALQCLRTALRRGPQDQLLLEIRQLYHQLTDK 291
Query: 66 GQYYVKLMWCPSHCGIRGNEAVDQAAKDPLLSPVIE 101
G + + W P HCGI GNE D AAK+ + V+E
Sbjct: 292 G-HDITFQWLPGHCGITGNEHADDAAKNAHENGVME 326
>gi|331249489|ref|XP_003337361.1| hypothetical protein PGTG_18955 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 313
Score = 42.7 bits (99), Expect = 0.025, Method: Composition-based stats.
Identities = 35/96 (36%), Positives = 45/96 (46%), Gaps = 10/96 (10%)
Query: 5 SNGIAELIAILLCLRSIKN-----HPAMRFLLV---SDSMGSLSAIANPYLSCPIISQIY 56
SN AEL+ I + +R IK P RF V SD+ G+L A+P P
Sbjct: 42 SNYEAELVGIGIAIRLIKKIIWSAWPG-RFKAVAIFSDNQGALIRTADPSQPSPGQHLYA 100
Query: 57 SAWCDLKTVGQYYVKLMWCPSHCGIRGNEAVDQAAK 92
+ L+ +G V L WCP H GI NE D+ AK
Sbjct: 101 DNFSSLRNLG-LPVSLYWCPGHEGITANEQADKMAK 135
>gi|427783069|gb|JAA56986.1| Putative tick transposon [Rhipicephalus pulchellus]
Length = 481
Score = 42.7 bits (99), Expect = 0.026, Method: Composition-based stats.
Identities = 24/83 (28%), Positives = 40/83 (48%), Gaps = 2/83 (2%)
Query: 21 IKNHPAMRFLLVSDSMGSLSAIANPYLSCPIISQIYSAWCDLKTVGQ--YYVKLMWCPSH 78
+ + R+ + SDS +L ++ + P ++ L T + ++VK W PSH
Sbjct: 243 VNHEQPQRWSVFSDSKAALQSLLSALRHGPYEQLVFEVRYLLHTSIEKGHHVKFQWLPSH 302
Query: 79 CGIRGNEAVDQAAKDPLLSPVIE 101
CG+ GNE D AA+ L +E
Sbjct: 303 CGVIGNEHADNAARSALQGDTLE 325
>gi|51599140|gb|AAU08224.1| pol protein [Human immunodeficiency virus 1]
Length = 1009
Score = 42.7 bits (99), Expect = 0.028, Method: Composition-based stats.
Identities = 35/92 (38%), Positives = 50/92 (54%), Gaps = 12/92 (13%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAIAN-PYLS-CPIISQIYSAWCDL 62
+N AEL+A+LL L+ K + +V+DS L I++ P S PI+ QI +L
Sbjct: 624 TNQKAELMAVLLALQDSKE----KVNIVTDSQYVLGIISSQPTQSESPIVQQIIE---EL 676
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ-AAKD 93
Q Y L W P+H GI GNE +D+ +KD
Sbjct: 677 TNKEQVY--LTWVPAHKGIGGNEKIDKLVSKD 706
>gi|37935891|gb|AAO47138.1| pol protein [Human immunodeficiency virus 1]
Length = 1009
Score = 42.7 bits (99), Expect = 0.028, Method: Composition-based stats.
Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 12/92 (13%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAIAN-PYLS-CPIISQIYSAWCDL 62
+N AEL+A+LL L+ K + +V+DS +L I++ P S PI+ QI
Sbjct: 624 TNQKAELMAVLLALQDSKE----KINIVTDSQYALGIISSQPTQSESPIVQQIIE----- 674
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ-AAKD 93
+ + V L W P+H GI GNE +D+ +KD
Sbjct: 675 ELTKKEKVYLTWVPAHKGIGGNEKIDKLVSKD 706
>gi|29243009|emb|CAD70671.1| Pol protein [Simian immunodeficiency virus - mon]
Length = 936
Score = 42.7 bits (99), Expect = 0.031, Method: Composition-based stats.
Identities = 33/87 (37%), Positives = 49/87 (56%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAIAN-PYLS-CPIISQIYSAWCDL 62
+N AEL A+LL L +N PA +V+DS + +A+ P +S PI+ +I
Sbjct: 554 TNQKAELEAVLLAL---QNGPA-SMNIVTDSQYVMGILASKPEVSESPIVEKIIQ----- 604
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ +G+ V L W P+H GI GNE VD+
Sbjct: 605 QLLGKKQVYLSWVPAHKGIGGNEEVDK 631
>gi|427784671|gb|JAA57787.1| Putative tick transposon [Rhipicephalus pulchellus]
Length = 434
Score = 42.4 bits (98), Expect = 0.031, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 40/86 (46%), Gaps = 2/86 (2%)
Query: 9 AELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAIANPYLSCP--IISQIYSAWCDLKTVG 66
AE++AI +R I P + + DS +L I + P +++Q + D+
Sbjct: 186 AEIVAIREVIRYISTKPPRSWTIFCDSKPALQIIYSALRRGPYYLLAQEVAESHDVALKS 245
Query: 67 QYYVKLMWCPSHCGIRGNEAVDQAAK 92
+ + W P HCG+ GNE D AK
Sbjct: 246 GHRIGYQWIPGHCGLHGNEQADAEAK 271
>gi|444892692|gb|AGE13501.1| pol protein, partial [Human immunodeficiency virus]
Length = 1008
Score = 42.4 bits (98), Expect = 0.031, Method: Composition-based stats.
Identities = 33/87 (37%), Positives = 47/87 (54%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAIAN-PYLS-CPIISQIYSAWCDL 62
+N AEL+A+LL L+ K + +V+DS L I++ P S PI+ QI +L
Sbjct: 623 TNQKAELMAVLLALKDSKE----KVNIVTDSQYVLGIISSQPTQSESPIVQQIIE---EL 675
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
Q Y L W P+H GI GNE +D+
Sbjct: 676 TRKEQVY--LAWVPAHKGIGGNEKIDK 700
>gi|256252577|dbj|BAH97686.1| Pol [Human immunodeficiency virus 1]
Length = 1009
Score = 42.4 bits (98), Expect = 0.032, Method: Composition-based stats.
Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 12/92 (13%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAIAN-PYLS-CPIISQIYSAWCDL 62
+N AEL+A+LL L+ K + +V+DS +L I++ P S PI+ QI
Sbjct: 624 TNQKAELMAVLLALQDSKE----KVNIVTDSQYTLGIISSQPTQSESPIVQQIIE----- 674
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ-AAKD 93
+ + V L W P+H GI GNE +D+ +KD
Sbjct: 675 ELTKKEKVYLTWVPAHKGIGGNEKIDKLVSKD 706
>gi|256252567|dbj|BAH97677.1| Pol [Human immunodeficiency virus 1]
Length = 1009
Score = 42.4 bits (98), Expect = 0.032, Method: Composition-based stats.
Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 12/92 (13%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAIAN-PYLS-CPIISQIYSAWCDL 62
+N AEL+A+LL L+ K + +V+DS +L I++ P S PI+ QI
Sbjct: 624 TNQKAELMAVLLALQDSKE----KVNIVTDSQYTLGIISSQPTQSESPIVQQIIE----- 674
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ-AAKD 93
+ + V L W P+H GI GNE +D+ +KD
Sbjct: 675 ELTKKEKVYLTWVPAHKGIGGNEKIDKLVSKD 706
>gi|37935871|gb|AAO47121.1| pol protein [Human immunodeficiency virus 1]
Length = 1009
Score = 42.4 bits (98), Expect = 0.032, Method: Composition-based stats.
Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 12/92 (13%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAIAN-PYLS-CPIISQIYSAWCDL 62
+N AEL+A+LL L+ K + +V+DS +L I++ P S PI+ QI
Sbjct: 624 TNQKAELMAVLLALQDSKE----KVNIVTDSQYTLGIISSQPTQSESPIVQQIIE----- 674
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ-AAKD 93
+ + V L W P+H GI GNE +D+ +KD
Sbjct: 675 ELTKKEKVYLTWVPAHKGIGGNEKIDKLVSKD 706
>gi|3776301|gb|AAC64709.1| reverse transcriptase [Human immunodeficiency virus 1]
Length = 560
Score = 42.4 bits (98), Expect = 0.033, Method: Composition-based stats.
Identities = 35/92 (38%), Positives = 50/92 (54%), Gaps = 12/92 (13%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAIAN-PYLS-CPIISQIYSAWCDL 62
+N AEL+A+LL L+ K + +V+DS L I++ P S PI+ QI +L
Sbjct: 473 TNQKAELMAVLLALQDSKE----KVNIVTDSQYVLGIISSQPTQSESPIVQQIIE---EL 525
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ-AAKD 93
Q Y L W P+H GI GNE +D+ +KD
Sbjct: 526 TKKEQVY--LTWVPAHKGIGGNEKIDKLVSKD 555
>gi|2232039|gb|AAB82087.1| reverse transcriptase [Human immunodeficiency virus 1]
Length = 560
Score = 42.4 bits (98), Expect = 0.033, Method: Composition-based stats.
Identities = 35/92 (38%), Positives = 50/92 (54%), Gaps = 12/92 (13%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAIAN-PYLS-CPIISQIYSAWCDL 62
+N AEL+A+LL L+ K + +V+DS L I++ P S PI+ QI +L
Sbjct: 473 TNQKAELMAVLLALQDSKE----KVNIVTDSQYVLGIISSQPTQSESPIVQQIIE---EL 525
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ-AAKD 93
Q Y L W P+H GI GNE +D+ +KD
Sbjct: 526 TKKEQVY--LTWVPAHKGIGGNEKIDKLVSKD 555
>gi|3776303|gb|AAC64710.1| reverse transcriptase [Human immunodeficiency virus 1]
Length = 560
Score = 42.4 bits (98), Expect = 0.033, Method: Composition-based stats.
Identities = 35/92 (38%), Positives = 50/92 (54%), Gaps = 12/92 (13%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAIAN-PYLS-CPIISQIYSAWCDL 62
+N AEL+A+LL L+ K + +V+DS L I++ P S PI+ QI +L
Sbjct: 473 TNQKAELMAVLLALQDSKE----KVNIVTDSQYVLGIISSQPTQSESPIVQQIIE---EL 525
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ-AAKD 93
Q Y L W P+H GI GNE +D+ +KD
Sbjct: 526 TKKEQVY--LTWVPAHKGIGGNEKIDKLVSKD 555
>gi|37935851|gb|AAO47103.1| pol protein [Human immunodeficiency virus 1]
Length = 1005
Score = 42.4 bits (98), Expect = 0.033, Method: Composition-based stats.
Identities = 35/92 (38%), Positives = 50/92 (54%), Gaps = 12/92 (13%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAIAN-PYLS-CPIISQIYSAWCDL 62
+N AEL+A+LL L+ K + +V+DS L I++ P S PI+ QI +L
Sbjct: 626 TNQKAELMAVLLALQDSKE----KVNIVTDSQYVLGIISSQPTQSESPIVQQIIE---EL 678
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ-AAKD 93
Q Y L W P+H GI GNE +D+ +KD
Sbjct: 679 TKKEQVY--LTWVPAHKGIGGNEKIDKLVSKD 708
>gi|37935861|gb|AAO47112.1| pol protein [Human immunodeficiency virus 1]
Length = 1009
Score = 42.4 bits (98), Expect = 0.033, Method: Composition-based stats.
Identities = 35/92 (38%), Positives = 50/92 (54%), Gaps = 12/92 (13%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAIAN-PYLS-CPIISQIYSAWCDL 62
+N AEL+A+LL L+ K + +V+DS L I++ P S PI+ QI +L
Sbjct: 624 TNQKAELMAVLLALQDSKE----KVNIVTDSQYVLGIISSQPTQSDSPIVQQIIE---EL 676
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ-AAKD 93
Q Y L W P+H GI GNE +D+ +KD
Sbjct: 677 TKKEQVY--LTWVPAHKGIGGNEKIDKLVSKD 706
>gi|37935841|gb|AAO47094.1| pol protein [Human immunodeficiency virus 1]
Length = 1009
Score = 42.4 bits (98), Expect = 0.034, Method: Composition-based stats.
Identities = 35/92 (38%), Positives = 50/92 (54%), Gaps = 12/92 (13%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAIAN-PYLS-CPIISQIYSAWCDL 62
+N AEL+A+LL L+ K + +V+DS L I++ P S PI+ QI +L
Sbjct: 624 TNQKAELMAVLLALQDSKE----KVNIVTDSQYVLGIISSQPTQSESPIVQQIIE---EL 676
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ-AAKD 93
Q Y L W P+H GI GNE +D+ +KD
Sbjct: 677 TKKEQVY--LTWVPAHKGIGGNEQIDKLVSKD 706
>gi|321462343|gb|EFX73367.1| hypothetical protein DAPPUDRAFT_253251 [Daphnia pulex]
Length = 159
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 42/92 (45%), Gaps = 2/92 (2%)
Query: 9 AELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAIANPYL-SCPIISQIYSAWCDLKTVGQ 67
AEL AI L I N + SDS+ S+ AI N + S +I I +L + G
Sbjct: 61 AELAAIRQALDYIYNFEIAVVNIFSDSLASVMAIHNQRVDSHHLIKDIRQTVSNLLSSGT 120
Query: 68 YYVKLMWCPSHCGIRGNEAVDQAAKDPLLSPV 99
+W PSH I GNE D+ A L PV
Sbjct: 121 R-TNFIWIPSHVTIPGNERADELATQCLSDPV 151
>gi|425775212|gb|EKV13494.1| hypothetical protein PDIG_38760 [Penicillium digitatum PHI26]
Length = 470
Score = 42.4 bits (98), Expect = 0.037, Method: Composition-based stats.
Identities = 35/107 (32%), Positives = 47/107 (43%), Gaps = 33/107 (30%)
Query: 9 AELIAILLCLRSIKNHPAMRF---------------LLVSDSMGSLSAIANPYLSCPIIS 53
AEL AI + L IK RF ++ +D+ +L AI NP +
Sbjct: 107 AELRAIEMALEVIKE----RFNDDNEWRDCLAKSGVVIFTDNQATLRAIQNPRMPS---G 159
Query: 54 QIYSA-------WCDLKTVGQYYVKLMWCPSHCGIRGNEAVDQAAKD 93
Q+Y WC+ K V+L W P+H GI GNEA D AK+
Sbjct: 160 QVYLEGCLRLLEWCNDKI----QVELRWVPAHEGIPGNEAADMYAKE 202
>gi|425774046|gb|EKV12369.1| Reverse transcriptase, putative [Penicillium digitatum PHI26]
Length = 1225
Score = 42.4 bits (98), Expect = 0.037, Method: Composition-based stats.
Identities = 35/107 (32%), Positives = 47/107 (43%), Gaps = 33/107 (30%)
Query: 9 AELIAILLCLRSIKNHPAMRF---------------LLVSDSMGSLSAIANPYLSCPIIS 53
AEL AI + L IK RF ++ +D+ +L AI NP +
Sbjct: 1018 AELRAIEMALEVIKE----RFNDDNEWRDCLAKSGVVIFTDNQATLRAIQNPRMPS---G 1070
Query: 54 QIYSA-------WCDLKTVGQYYVKLMWCPSHCGIRGNEAVDQAAKD 93
Q+Y WC+ K V+L W P+H GI GNEA D AK+
Sbjct: 1071 QVYLEGCLRLLEWCNDKI----QVELRWVPAHEGIPGNEAADMYAKE 1113
>gi|425773855|gb|EKV12180.1| hypothetical protein PDIG_45050 [Penicillium digitatum PHI26]
gi|425780488|gb|EKV18494.1| hypothetical protein PDIG_08080 [Penicillium digitatum PHI26]
gi|425781625|gb|EKV19579.1| hypothetical protein PDIG_02180 [Penicillium digitatum PHI26]
Length = 1381
Score = 42.4 bits (98), Expect = 0.037, Method: Composition-based stats.
Identities = 35/107 (32%), Positives = 47/107 (43%), Gaps = 33/107 (30%)
Query: 9 AELIAILLCLRSIKNHPAMRF---------------LLVSDSMGSLSAIANPYLSCPIIS 53
AEL AI + L IK RF ++ +D+ +L AI NP +
Sbjct: 1018 AELRAIEMALEVIKE----RFNDDNEWRDCLAKSGVVIFTDNQATLRAIQNPRMPS---G 1070
Query: 54 QIYSA-------WCDLKTVGQYYVKLMWCPSHCGIRGNEAVDQAAKD 93
Q+Y WC+ K V+L W P+H GI GNEA D AK+
Sbjct: 1071 QVYLEGCLRLLEWCNDKI----QVELRWVPAHEGIPGNEAADMYAKE 1113
>gi|331251935|ref|XP_003338548.1| hypothetical protein PGTG_20180 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 431
Score = 42.4 bits (98), Expect = 0.038, Method: Composition-based stats.
Identities = 31/95 (32%), Positives = 43/95 (45%), Gaps = 8/95 (8%)
Query: 5 SNGIAELIAILLCLRSIK-------NHPAMRFLLVSDSMGSLSAIANPYLSCPIISQIYS 57
SN AEL I L K +H + D+ G+L+ A+P P
Sbjct: 302 SNFEAELTGIKLATELAKQAIEADHSHEIDTVAIFCDNQGALTLSADPLSLSPGQHLYTD 361
Query: 58 AWCDLKTVGQYYVKLMWCPSHCGIRGNEAVDQAAK 92
+ ++ +G+ VKL WCP H GI+ NEA D AK
Sbjct: 362 NFFSMRFLGRQ-VKLYWCPGHEGIKANEAADALAK 395
>gi|331240525|ref|XP_003332913.1| hypothetical protein PGTG_14072 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 339
Score = 42.4 bits (98), Expect = 0.039, Method: Composition-based stats.
Identities = 26/78 (33%), Positives = 35/78 (44%), Gaps = 5/78 (6%)
Query: 28 RFLLVSDSMGSLSAIANPYLSCP---IISQIYSAWCDLKTVGQYYVKLMWCPSHCGIRGN 84
R L++ D+ G L + +P P + QI+ L V WCP H I GN
Sbjct: 132 RILILVDNQGVLKRLNDPLAPKPGQKLFEQIHKGLSLLP--AHLNVTFAWCPGHRDIMGN 189
Query: 85 EAVDQAAKDPLLSPVIEK 102
E D AKD L SP ++
Sbjct: 190 EMADTLAKDALESPSTQQ 207
>gi|393224307|gb|EJD32758.1| hypothetical protein AURDEDRAFT_47828, partial [Auricularia
delicata TFB-10046 SS5]
Length = 95
Score = 42.0 bits (97), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 42/91 (46%), Gaps = 7/91 (7%)
Query: 9 AELIAILLCLRS----IKNHPAMRFLLVSDSMGSLSAIANPYLSCP--IISQIYSAWCDL 62
AEL ILL LR ++ P ++ D+ + NP I I+ A DL
Sbjct: 2 AELYGILLALRMAMRLLRRAPRPEVVIGLDNNSAAQRAHNPQARSGQLITDAIHRAVQDL 61
Query: 63 KTVG-QYYVKLMWCPSHCGIRGNEAVDQAAK 92
+ + V+L+W P H GI GNE D+ AK
Sbjct: 62 RQKHPRTRVRLVWVPGHEGIPGNELADEHAK 92
>gi|427783063|gb|JAA56983.1| Putative tick transposon [Rhipicephalus pulchellus]
Length = 460
Score = 41.6 bits (96), Expect = 0.053, Method: Composition-based stats.
Identities = 26/93 (27%), Positives = 43/93 (46%), Gaps = 2/93 (2%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAIANPYLSCPIISQIYSAWCDLKT 64
S+ AEL A+ L + R+ + +DS +L ++ + P ++ + T
Sbjct: 206 SSTAAELAALRTALCVLNREQPQRWSIFTDSKAALQSLLSALRHGPYEQLVFEIGHLIHT 265
Query: 65 VGQ--YYVKLMWCPSHCGIRGNEAVDQAAKDPL 95
+ + V W PSHCG+ GNE D AA+ L
Sbjct: 266 SSEKGHQVTFQWLPSHCGVIGNEHADNAARSAL 298
>gi|307206121|gb|EFN84201.1| hypothetical protein EAI_09989 [Harpegnathos saltator]
Length = 101
Score = 41.6 bits (96), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 42/87 (48%), Gaps = 4/87 (4%)
Query: 9 AELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI---ANPYLSCPIISQIYSAWCDLKTV 65
AE+ A+L LR + ++ +DS ++S+I ++ + P I I L
Sbjct: 14 AEITALLHALRISDERNLNKAIIATDSRSAVSSILKVSDAKYTHPWIILIKDILYQLHRR 73
Query: 66 GQYYVKLMWCPSHCGIRGNEAVDQAAK 92
G VKL+W PSHC I GNE D K
Sbjct: 74 GTI-VKLLWIPSHCDIVGNERTDALTK 99
>gi|393226542|gb|EJD34284.1| hypothetical protein AURDEDRAFT_37261, partial [Auricularia
delicata TFB-10046 SS5]
Length = 72
Score = 41.6 bits (96), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 35/72 (48%), Gaps = 9/72 (12%)
Query: 27 MRFLLVSDSMGSLSAIANPYLSCPIISQIYS-AWCD-----LKTVGQYYVKLMWCPSHCG 80
R +D+ S+ AI + P SQ +S +C+ L + V + W PSH G
Sbjct: 1 TRLYFFADNSSSVEAILQEH---PGPSQEFSITFCERAHDFLAADASHEVTVSWVPSHIG 57
Query: 81 IRGNEAVDQAAK 92
IRGNE DQ AK
Sbjct: 58 IRGNERADQLAK 69
>gi|154284844|ref|XP_001543217.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150406858|gb|EDN02399.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 1758
Score = 41.6 bits (96), Expect = 0.054, Method: Composition-based stats.
Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 3/87 (3%)
Query: 9 AELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAIANPYLSC--PIISQIYSAWCDLKTVG 66
AEL+ I + L I R + +D+ +L A+ NP S I+ +I + + G
Sbjct: 1486 AELLGIHMGLNLILASGRRRAAIFTDNQAALKALQNPRRSSGQSILRRIMDTLERVNSQG 1545
Query: 67 QYYVKLMWCPSHCGIRGNEAVDQAAKD 93
V+ W P+H GI GNE D+ AK+
Sbjct: 1546 -LQVEFYWIPAHQGIEGNELADKLAKE 1571
>gi|427793319|gb|JAA62111.1| Putative tick transposon, partial [Rhipicephalus pulchellus]
Length = 333
Score = 41.6 bits (96), Expect = 0.055, Method: Composition-based stats.
Identities = 26/93 (27%), Positives = 43/93 (46%), Gaps = 2/93 (2%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAIANPYLSCPIISQIYSAWCDLKT 64
S+ AEL A+ L + R+ + +DS +L ++ + P ++ + T
Sbjct: 83 SSTAAELAALRTALCVLNREQPQRWSIFTDSKAALQSLLSALRHGPYEQLVFEIRHLIHT 142
Query: 65 VGQ--YYVKLMWCPSHCGIRGNEAVDQAAKDPL 95
+ + V W PSHCG+ GNE D AA+ L
Sbjct: 143 SSEKGHQVTFQWLPSHCGVIGNEHADNAARSAL 175
>gi|427783061|gb|JAA56982.1| Putative tick transposon [Rhipicephalus pulchellus]
Length = 460
Score = 41.6 bits (96), Expect = 0.056, Method: Composition-based stats.
Identities = 26/93 (27%), Positives = 43/93 (46%), Gaps = 2/93 (2%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAIANPYLSCPIISQIYSAWCDLKT 64
S+ AEL A+ L + R+ + +DS +L ++ + P ++ + T
Sbjct: 206 SSTAAELAALRTALCVLNREQPQRWSIFTDSKAALQSLLSALRHGPYEQLVFEIRHLIHT 265
Query: 65 VGQ--YYVKLMWCPSHCGIRGNEAVDQAAKDPL 95
+ + V W PSHCG+ GNE D AA+ L
Sbjct: 266 SSEKGHQVTFQWLPSHCGVIGNEHADNAARSAL 298
>gi|37935941|gb|AAO47182.1| pol protein [Human immunodeficiency virus 1]
Length = 1011
Score = 41.6 bits (96), Expect = 0.056, Method: Composition-based stats.
Identities = 35/92 (38%), Positives = 50/92 (54%), Gaps = 12/92 (13%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAIAN-PYLS-CPIISQIYSAWCDL 62
+N AEL+AILL L+ K +V+DS +L I++ P S P++ QI +L
Sbjct: 626 TNQKAELMAILLALQDSKE----TVNIVTDSQYALGIISSQPTQSDSPLVQQIIE---EL 678
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ-AAKD 93
Q Y L W P+H GI GNE +D+ +KD
Sbjct: 679 TKKEQVY--LAWVPAHKGIGGNEKIDKLVSKD 708
>gi|427792011|gb|JAA61457.1| Putative tick transposon, partial [Rhipicephalus pulchellus]
Length = 1121
Score = 41.6 bits (96), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 12/89 (13%)
Query: 3 HCSNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI------ANPYLSCPIISQIY 56
H S AE AIL+ ++ I NH + ++ +DS+ + A+ NP L C + Q+
Sbjct: 989 HTSIFTAEAYAILIAIKYILNHNITKSVIFTDSLSVVRALHTGKPNKNPVL-CDVEKQLT 1047
Query: 57 SAWCDLKTVGQYYVKLMWCPSHCGIRGNE 85
+A+ + + + W P H GI GNE
Sbjct: 1048 NAYRNTSEI-----TVCWVPGHAGIDGNE 1071
>gi|328697366|ref|XP_003240318.1| PREDICTED: hypothetical protein LOC100575042 [Acyrthosiphon pisum]
Length = 891
Score = 41.6 bits (96), Expect = 0.057, Method: Composition-based stats.
Identities = 27/74 (36%), Positives = 36/74 (48%), Gaps = 7/74 (9%)
Query: 30 LLVSDSMGSLSAIANPYLSCPIISQIYSAWCDLKTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
LL+SDS+ +L A N I S I + K + MW PSH GI GNE D+
Sbjct: 208 LLISDSLSTLLAFKNTSPRNEITSNIQACLVQSKK----NIVFMWVPSHTGIIGNEKADK 263
Query: 90 AAKDP---LLSPVI 100
A+ +L+P I
Sbjct: 264 HAEQATQTILNPTI 277
>gi|255940992|ref|XP_002561265.1| Pc16g09510 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211585888|emb|CAP93621.1| Pc16g09510 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 1249
Score = 41.6 bits (96), Expect = 0.061, Method: Composition-based stats.
Identities = 33/97 (34%), Positives = 44/97 (45%), Gaps = 13/97 (13%)
Query: 9 AELIAILLCLRSIKNHPAMRFLL----------VSDSMGSLSAIANP--YLSCPIISQIY 56
AELI IL + I + R L +S SM +L AI P II I
Sbjct: 972 AELIGILHAIEIINKVASERRRLHAEQVRLATILSGSMSALQAIQTPGNKSGQRIIHAIL 1031
Query: 57 SAWCDLKTVGQYYVKLMWCPSHCGIRGNEAVDQAAKD 93
A + KT G ++L W P HC GN++ D+ AK+
Sbjct: 1032 EAAINTKTHG-VTIRLQWIPGHCAAPGNDSADRLAKE 1067
>gi|14582835|gb|AAK69674.1|AF349680_2 pol protein [Simian immunodeficiency virus]
Length = 1022
Score = 41.2 bits (95), Expect = 0.069, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 45/87 (51%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAIA-NPYLS-CPIISQIYSAWCDL 62
+N AEL A+LL L+ R +V+DS +A +P S P++ QI
Sbjct: 646 TNQKAELGAVLLALKD----SGKRVNIVTDSRHVFGILAGSPDTSESPLVQQIIE----- 696
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ +G+ V L W P+H GI GNE VD+
Sbjct: 697 QMIGKEEVYLSWVPAHKGIGGNEQVDK 723
>gi|301508610|gb|ADK78271.1| pol protein [Simian immunodeficiency virus]
Length = 1017
Score = 41.2 bits (95), Expect = 0.072, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 45/87 (51%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAIA-NPYLS-CPIISQIYSAWCDL 62
+N AEL A+LL L+ R +V+DS +A +P S P++ QI
Sbjct: 641 TNQKAELEAVLLALKD----SGKRVNIVTDSQYVFGILAGSPDTSESPLVQQIIE----- 691
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ +G+ V L W P+H GI GNE VD+
Sbjct: 692 QLIGKEEVYLSWVPAHKGIGGNEEVDK 718
>gi|427779363|gb|JAA55133.1| Putative tick transposon [Rhipicephalus pulchellus]
Length = 417
Score = 41.2 bits (95), Expect = 0.073, Method: Composition-based stats.
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Query: 28 RFLLVSDSMGSLSAIANPYLSCPIISQIYSAWCDLKTVGQ--YYVKLMWCPSHCGIRGNE 85
R+ + SDS +L ++ + P ++ L T + ++VK W PSHCG+ GNE
Sbjct: 250 RWSVFSDSKAALQSLLSALRHGPYEQLVFEVRHLLHTSIEKGHHVKFQWLPSHCGVIGNE 309
Query: 86 AVDQAAKDPLLSPVIE 101
D AA+ L +E
Sbjct: 310 HADSAARSALQGDRLE 325
>gi|427782325|gb|JAA56614.1| Putative tick transposon [Rhipicephalus pulchellus]
Length = 1173
Score = 41.2 bits (95), Expect = 0.075, Method: Composition-based stats.
Identities = 29/93 (31%), Positives = 40/93 (43%), Gaps = 7/93 (7%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAIANPYLS-----CPIISQIYSAW 59
S+ AEL + I + L DS +L I N Y+ P++ +I
Sbjct: 918 SSTAAELTGVRQAAHFISQQSPATWTLFCDSKPALQLIGN-YMKQGTAYSPLVYEIMIML 976
Query: 60 CDLKTVGQYYVKLMWCPSHCGIRGNEAVDQAAK 92
+ G + + L W PSHCGI GNE D AK
Sbjct: 977 TEASQSG-HTITLQWIPSHCGIAGNEQADAEAK 1008
>gi|37935911|gb|AAO47155.1| pol protein [Human immunodeficiency virus 1]
Length = 1009
Score = 41.2 bits (95), Expect = 0.080, Method: Composition-based stats.
Identities = 34/92 (36%), Positives = 50/92 (54%), Gaps = 12/92 (13%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAIAN-PYLS-CPIISQIYSAWCDL 62
+N AEL+A+L+ L+ K + +V+DS L I++ P S PI+ QI +L
Sbjct: 624 TNQKAELMAVLVALQDSKE----KVNIVTDSQYVLGIISSQPTQSESPIVQQIIE---EL 676
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ-AAKD 93
Q Y L W P+H GI GNE +D+ +KD
Sbjct: 677 TKKEQVY--LTWVPAHKGIGGNEKIDKLVSKD 706
>gi|74835158|dbj|BAE44464.1| non-LTR retrotransposon CATS [Bombyx mori]
Length = 809
Score = 41.2 bits (95), Expect = 0.080, Method: Composition-based stats.
Identities = 28/97 (28%), Positives = 49/97 (50%), Gaps = 5/97 (5%)
Query: 3 HCSNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAIANPYLSCPIISQIYSAWCDL 62
+C+ AEL+A+L + + A + + D+ +L IA+ P+ +I +L
Sbjct: 558 YCTVYQAELLALLKATEEVLSGGAATYNIFCDARSTLDVIASGESLHPLAFKITK---NL 614
Query: 63 KTVGQ--YYVKLMWCPSHCGIRGNEAVDQAAKDPLLS 97
KT+ + ++L W +H G+ GNE D AK+ LS
Sbjct: 615 KTITERNQEIRLFWIKAHIGLEGNERADVLAKEAALS 651
>gi|321453153|gb|EFX64418.1| hypothetical protein DAPPUDRAFT_266424 [Daphnia pulex]
Length = 352
Score = 41.2 bits (95), Expect = 0.083, Method: Composition-based stats.
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Query: 28 RFLLVSDSMGSLSAIANPYLS-CPIISQIYSAWCDLKTVGQYYVKLMWCPSHCGIRGNEA 86
+ + SDS + +I +P PII+ I + +LK+ G + L W PSH GI GN A
Sbjct: 130 KLTIFSDSRSVVQSIESPKKEKYPIINAILTTADNLKSAGTK-INLYWIPSHVGIPGNGA 188
Query: 87 VDQAAKD 93
D+ A +
Sbjct: 189 ADRLASE 195
>gi|427792791|gb|JAA61847.1| Putative tick transposon, partial [Rhipicephalus pulchellus]
Length = 650
Score = 41.2 bits (95), Expect = 0.085, Method: Composition-based stats.
Identities = 29/93 (31%), Positives = 40/93 (43%), Gaps = 7/93 (7%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAIANPYLS-----CPIISQIYSAW 59
S+ AEL + I + L DS +L I N Y+ P++ +I
Sbjct: 395 SSTAAELTGVRQAAHFISQQSPATWTLFCDSKPALQLIGN-YMKQGTAYSPLVYEIMIML 453
Query: 60 CDLKTVGQYYVKLMWCPSHCGIRGNEAVDQAAK 92
+ G + + L W PSHCGI GNE D AK
Sbjct: 454 TEASQSG-HTITLQWIPSHCGIAGNEQADAEAK 485
>gi|255964745|gb|ACU44666.1| pol protein [Human immunodeficiency virus 1]
Length = 1009
Score = 40.8 bits (94), Expect = 0.092, Method: Composition-based stats.
Identities = 35/92 (38%), Positives = 49/92 (53%), Gaps = 12/92 (13%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAIAN-PYLS-CPIISQIYSAWCDL 62
+N AEL+A+LL L+ K +V+DS L I++ P S PI+ QI +L
Sbjct: 624 TNQKAELMAVLLALQDSKE----TVNIVTDSQYVLGIISSQPTQSDSPIVQQIIE---EL 676
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ-AAKD 93
Q Y L W P+H GI GNE +D+ +KD
Sbjct: 677 TKKEQVY--LAWVPAHKGIGGNEKIDKLVSKD 706
>gi|14582845|gb|AAK69683.1|AF349681_2 pol protein [Simian immunodeficiency virus]
Length = 1022
Score = 40.8 bits (94), Expect = 0.096, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 45/87 (51%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAIA-NPYLS-CPIISQIYSAWCDL 62
+N AEL A+LL L+ + LV+DS +A +P S P++ QI
Sbjct: 646 TNQKAELEAVLLALKD----SGKKVNLVTDSQYVFGILAGSPDTSESPLVQQIIE----- 696
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ +G+ V L W P+H GI GNE VD+
Sbjct: 697 QLIGKEEVYLSWVPAHKGIGGNEQVDK 723
>gi|256252557|dbj|BAH97668.1| Pol [Human immunodeficiency virus 1]
Length = 1009
Score = 40.8 bits (94), Expect = 0.097, Method: Composition-based stats.
Identities = 33/87 (37%), Positives = 45/87 (51%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N AEL+A+L+ L+ K +V+DS L I A P S PI+ QI +L
Sbjct: 624 TNQKAELMAVLIALQDSKEAVN----IVTDSQYVLGIISAQPTQSDSPIVQQIIE---EL 676
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
Q Y L W P+H GI GNE +D+
Sbjct: 677 TKKEQVY--LTWVPAHKGIGGNEKIDK 701
>gi|256252547|dbj|BAH97659.1| Pol [Human immunodeficiency virus 1]
Length = 1009
Score = 40.8 bits (94), Expect = 0.097, Method: Composition-based stats.
Identities = 33/87 (37%), Positives = 45/87 (51%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N AEL+A+L+ L+ K +V+DS L I A P S PI+ QI +L
Sbjct: 624 TNQKAELMAVLIALQDSKEAVN----IVTDSQYVLGIISAQPTQSDSPIVQQIIE---EL 676
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
Q Y L W P+H GI GNE +D+
Sbjct: 677 TKKEQVY--LTWVPAHKGIGGNEKIDK 701
>gi|393230530|gb|EJD38134.1| hypothetical protein AURDEDRAFT_30267, partial [Auricularia
delicata TFB-10046 SS5]
Length = 90
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 8/86 (9%)
Query: 9 AELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAIANPYLSCPIISQ-----IYSAWCDL- 62
AEL+ ILL LR I N P + L + + + SA+ Y CP Q IY+A+ +
Sbjct: 7 AELVGILLALRIIANCPDV--LNATVCLDNQSAVTCTYNPCPKPGQLITIAIYNAYKSIC 64
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVD 88
T +++ ++W P H GI GN+ D
Sbjct: 65 ATWPGFHLSIIWVPGHEGIDGNKWAD 90
>gi|37935951|gb|AAO47191.1| pol protein [Human immunodeficiency virus 1]
Length = 1005
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 12/92 (13%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAIAN-PYLS-CPIISQIYSAWCDL 62
+N AEL+A+L+ L+ K + +V+DS L I++ P S PI+ QI +L
Sbjct: 626 TNQKAELMAVLIALQDSKE----KVNIVTDSQYVLGIISSQPTQSDSPIVQQIIE---EL 678
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ-AAKD 93
Q Y+ W P+H GI GNE +D+ +KD
Sbjct: 679 TKKEQTYIT--WVPAHKGIGGNEKIDKLVSKD 708
>gi|426222090|ref|XP_004005236.1| PREDICTED: ribonuclease H1 [Ovis aries]
Length = 262
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 41/95 (43%), Gaps = 13/95 (13%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAIANPYLSCPIISQIYSAWCDLKT 64
+N AE+ A + K + +L +DSM ++ N +CP ++ WC
Sbjct: 180 TNQRAEIHAACKAIEQAKAQDITKLVLYTDSMFTI----NGKSACPSPEEV---WC---- 228
Query: 65 VGQYYVKLMWCPSHCGIRGNEAVDQAAKDPLLSPV 99
Q + M P H G RGNE D+ A++ P
Sbjct: 229 --QGGTQTMHVPGHSGFRGNEEADRLAREGAKQPA 261
>gi|37935908|gb|AAP42148.1| pol protein [Human immunodeficiency virus 1]
Length = 1009
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 12/92 (13%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAIAN-PYLS-CPIISQIYSAWCDL 62
+N AEL+A+LL L+ K +V+DS +L I++ P S PI+ QI
Sbjct: 624 TNQKAELMAVLLALQDSKEXVN----IVTDSQYALGIISSQPTQSESPIVQQIIE----- 674
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ-AAKD 93
+ + V L W P+H GI GNE +D+ +KD
Sbjct: 675 ELTRKERVYLAWVPAHKGIGGNEKIDKLVSKD 706
>gi|259482037|tpe|CBF76131.1| TPA: hypothetical protein ANIA_10625 [Aspergillus nidulans FGSC A4]
Length = 486
Score = 40.8 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 28/88 (31%), Positives = 41/88 (46%), Gaps = 3/88 (3%)
Query: 8 IAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAIANPYLSCP--IISQIYSAWCDLKTV 65
+AEL ILL L I ++ +D+ +L A+ NP I+ I A +
Sbjct: 223 VAELQGILLALVIILQRQMQHAVIFTDNQATLQALRNPGSQSGQYILEAIIMALNKGRKA 282
Query: 66 GQYYVKLMWCPSHCGIRGNEAVDQAAKD 93
G V W P+H G+ GNE D+ AK+
Sbjct: 283 G-LNVHFRWIPAHRGVEGNEQADRRAKE 309
>gi|67537820|ref|XP_662684.1| hypothetical protein AN5080.2 [Aspergillus nidulans FGSC A4]
gi|40740985|gb|EAA60175.1| hypothetical protein AN5080.2 [Aspergillus nidulans FGSC A4]
Length = 804
Score = 40.8 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 28/88 (31%), Positives = 41/88 (46%), Gaps = 3/88 (3%)
Query: 8 IAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAIANPYLSCP--IISQIYSAWCDLKTV 65
+AEL ILL L I ++ +D+ +L A+ NP I+ I A +
Sbjct: 223 VAELQGILLALVIILQRQMQHAVIFTDNQATLQALRNPGSQSGQYILEAIIMALNKGRKA 282
Query: 66 GQYYVKLMWCPSHCGIRGNEAVDQAAKD 93
G V W P+H G+ GNE D+ AK+
Sbjct: 283 G-LNVHFRWIPAHRGVEGNEQADRRAKE 309
>gi|255940918|ref|XP_002561228.1| Pc16g09090 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211585851|emb|CAP93579.1| Pc16g09090 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 696
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 29/98 (29%), Positives = 46/98 (46%), Gaps = 13/98 (13%)
Query: 8 IAELIAILLCLRSI----------KNHPAMRFLLVSDSMGSLSAIANP--YLSCPIISQI 55
+AELI I + ++ +++ ++ DS +L AI NP II I
Sbjct: 428 VAELIGIFYAVSTVFKISHQRPRTEHNRTTTATILCDSKSALQAIENPGNKSGQRIIHAI 487
Query: 56 YSAWCDLKTVGQYYVKLMWCPSHCGIRGNEAVDQAAKD 93
A +++ G ++L W P HC GN+A D+ AKD
Sbjct: 488 LQAAAEVQAKG-IALRLQWIPGHCDDPGNDAADRLAKD 524
>gi|386642406|emb|CCD41788.1| pol protein, partial [Simian immunodeficiency virus]
Length = 658
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 48/87 (55%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N AEL A+LL L+ + P + +V+DS + A P S PI+++I +
Sbjct: 383 TNQKAELEAVLLALKD--SGPKVN--IVTDSQYVYGILEAQPEFSDSPIVTEIIN----- 433
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ +G+ V L W P+H GI GNE VD+
Sbjct: 434 QLIGKEAVYLSWVPAHKGIGGNEEVDK 460
>gi|386642404|emb|CCD41787.1| pol protein, partial [Simian immunodeficiency virus]
Length = 651
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 48/87 (55%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N AEL A+LL L+ + P + +V+DS + A P S PI+++I +
Sbjct: 372 TNQKAELEAVLLALKD--SGPKVN--IVTDSQYVYGILEAQPEFSDSPIVTEIIN----- 422
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ +G+ V L W P+H GI GNE VD+
Sbjct: 423 QLIGKEAVYLSWVPAHKGIGGNEEVDK 449
>gi|302594732|gb|ADL59554.1| reverse transcriptase [Human immunodeficiency virus 1]
Length = 120
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 44/91 (48%), Gaps = 11/91 (12%)
Query: 1 MFHCSNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSA 58
+ +N EL AI L L+ + +V+DS +L I A P S I++QI
Sbjct: 29 LTETTNQKTELHAIYLALQD----SGLEVNIVTDSQYALGIIHAQPDQSDSEIVNQIIE- 83
Query: 59 WCDLKTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
K + + V L W P+H GI GNE VD+
Sbjct: 84 ----KLIEKERVYLSWVPAHKGIGGNEQVDK 110
>gi|400595699|gb|EJP63491.1| reverse transcriptase [Beauveria bassiana ARSEF 2860]
Length = 560
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 15/30 (50%), Positives = 19/30 (63%)
Query: 70 VKLMWCPSHCGIRGNEAVDQAAKDPLLSPV 99
+++ WCP H GI GNE DQ AK+ PV
Sbjct: 379 IRVRWCPGHTGIEGNELADQLAKESAKMPV 408
>gi|156254413|gb|ABU62696.1| RNase H [Human immunodeficiency virus 1]
Length = 120
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 44/91 (48%), Gaps = 11/91 (12%)
Query: 1 MFHCSNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSA 58
+ +N EL AI L L+ + +V+DS +L I A P S I+SQI
Sbjct: 29 LTDTTNQKTELQAIYLALQD----SGLEVNIVTDSQYALGIIQAQPDKSESEIVSQIIE- 83
Query: 59 WCDLKTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + V L W P+H GI GNE +D+
Sbjct: 84 ----QLINKEKVYLAWVPAHKGIGGNEQIDK 110
>gi|22037885|gb|AAM90222.1| pol protein [Simian immunodeficiency virus]
Length = 1016
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 34/89 (38%), Positives = 48/89 (53%), Gaps = 15/89 (16%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDS---MGSLSAIANPYLSC-PIISQIYSAWC 60
+N AEL A+LL L+ + P M LV+DS MG L + P +S P++ QI
Sbjct: 632 TNQQAELQAVLLALK--EGPPRMN--LVTDSQYVMGILQS--QPEVSTSPLVEQIIQ--- 682
Query: 61 DLKTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ +G+ V L W P+H GI GN VD+
Sbjct: 683 --ELLGKEAVYLSWVPAHKGIGGNTEVDK 709
>gi|12597214|dbj|BAB21511.1| TRAS3 [Bombyx mori]
Length = 1682
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 28/95 (29%), Positives = 46/95 (48%), Gaps = 9/95 (9%)
Query: 3 HCSNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAIAN---PY-LSCPIISQIYSA 58
+C+ AEL+A+ + ++ + F + SDSM +L I N P+ L+ I ++
Sbjct: 1433 YCTVYQAELLALCVATTEVRKSKSKSFGVYSDSMSALQTITNYDSPHPLAVEARQNIKAS 1492
Query: 59 WCDLKTVGQYYVKLMWCPSHCGIRGNEAVDQAAKD 93
K V L W +H G++GNE D AK+
Sbjct: 1493 LLQGKAV-----TLHWIKAHAGLKGNERADGLAKE 1522
>gi|444892702|gb|AGE13510.1| pol protein, partial [Human immunodeficiency virus]
Length = 1009
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 34/92 (36%), Positives = 50/92 (54%), Gaps = 12/92 (13%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAIAN-PYLS-CPIISQIYSAWCDL 62
+N AEL+A+LL L+ K +V+DS +L I++ P S PI+ QI +L
Sbjct: 624 TNQKAELMAMLLALQDSKE----TVNIVTDSQYTLGIISSQPTQSESPIVQQIIE---EL 676
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ-AAKD 93
+ Y L W P+H GI GNE +D+ +KD
Sbjct: 677 TKKDKVY--LTWVPAHKGIGGNEKIDKLVSKD 706
>gi|37728002|gb|AAR02368.1| pol protein [Simian immunodeficiency virus]
Length = 1011
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 32/87 (36%), Positives = 47/87 (54%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAIAN-PYLSC-PIISQIYSAWCDL 62
+N AEL A+LL L+ + P M LV+DS L +A+ P S P++ QI
Sbjct: 629 TNQKAELEAVLLALK--EGPPRMN--LVTDSQYVLGIVASQPQESTSPLVEQIIQ----- 679
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + + L W P+H GI GNE VD+
Sbjct: 680 ELLSKEAIYLSWVPAHKGIGGNEEVDK 706
>gi|257146476|emb|CAT00618.1| gag/pol precursor [HIV-1 M_97CD.KMST91]
Length = 1429
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 32/87 (36%), Positives = 46/87 (52%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N AEL AILL L+ + +V+DS +L I A P S +++QI
Sbjct: 1054 TNQKAELHAILLALQD----SGLEVNIVTDSQYALGIIQAQPDRSESELVNQIIE----- 1104
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ +G+ V L W P+H GI GNE VD+
Sbjct: 1105 QLIGKEKVYLSWVPAHKGIGGNEQVDK 1131
>gi|427791927|gb|JAA61415.1| Putative tick transposon, partial [Rhipicephalus pulchellus]
Length = 1045
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 30/92 (32%), Positives = 41/92 (44%), Gaps = 2/92 (2%)
Query: 2 FHCSNGIAELIAILLCLRSIKNH-PAMRFLLVSDSMGSLSAIANPYLSCPIISQIYSAWC 60
F S+ AEL + L + P ++SDS +L +ANP + S + + +
Sbjct: 805 FPASSTAAELAGLHLAADLLAEEIPVQPVAVLSDSKSALQTLANPRRAGLTGSLLAAKYQ 864
Query: 61 DLKTVGQYYVKLMWCPSHCGIRGNEAVDQAAK 92
L G V W PSH GI GNE D AK
Sbjct: 865 ALAASGAS-VSFHWLPSHVGIAGNEEADTLAK 895
>gi|255984490|gb|ACU46317.1| reverse transcriptase [Human immunodeficiency virus 1]
Length = 160
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 45/91 (49%), Gaps = 11/91 (12%)
Query: 1 MFHCSNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSA 58
+ +N EL AILL L+ + +V+DS +L I A P S ++SQI
Sbjct: 69 LTDTTNQKTELQAILLALQD----SGLEVNIVTDSQYALGIIQAQPDKSESELVSQIIE- 123
Query: 59 WCDLKTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + + L W P+H GI GNE VD+
Sbjct: 124 ----QLIQKEKIYLAWVPAHKGIGGNEQVDK 150
>gi|242825825|ref|XP_002488518.1| conserved hypothetical protein [Talaromyces stipitatus ATCC 10500]
gi|218712336|gb|EED11762.1| conserved hypothetical protein [Talaromyces stipitatus ATCC 10500]
Length = 427
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 39/124 (31%), Positives = 54/124 (43%), Gaps = 22/124 (17%)
Query: 1 MFHCSNGIAELI----AILLCLR-------SIKNHPAMRFLLVSDSMGSLSAIANPYLSC 49
M H S IAELI AI L L+ S + ++SDS ++ AI NP +
Sbjct: 138 MAHWSIHIAELIGVYYAISLALKIFHQNGQSTRPGAGEAITILSDSKSAIQAIKNPRNTS 197
Query: 50 --PIISQIYSAWCDLKTVGQYYVKLMWCPSHCGIRGNEAVDQAAK--------DPLLSPV 99
+I I + +L + G + L W P HC GN+A D+ AK P PV
Sbjct: 198 GQRVIEAINQSAYELDSRG-IPLHLQWIPGHCDNLGNDAADRLAKAAVGPTKTHPFCRPV 256
Query: 100 IEKK 103
+K
Sbjct: 257 SREK 260
>gi|255951480|ref|XP_002566507.1| Pc22g26400 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211593524|emb|CAP99928.1| Pc22g26400 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 168
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 45/98 (45%), Gaps = 13/98 (13%)
Query: 8 IAELIAILLCLRSI----------KNHPAMRFLLVSDSMGSLSAIANPYLSCP--IISQI 55
+AELI I + ++ +++ ++ DS +L AI NP II I
Sbjct: 61 VAELIGIFYAVSTVFKISHQWPSTEHNGTTTATILCDSKTALQAIENPGNKSGQRIIHAI 120
Query: 56 YSAWCDLKTVGQYYVKLMWCPSHCGIRGNEAVDQAAKD 93
A ++ G ++L W P HC GN+A D+ AKD
Sbjct: 121 LQAAAKVQANG-IALRLQWIPGHCDDPGNDAADRLAKD 157
>gi|390602926|gb|EIN12318.1| RnaseH-domain-containing protein, partial [Punctularia
strigosozonata HHB-11173 SS5]
Length = 325
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 32/96 (33%), Positives = 44/96 (45%), Gaps = 11/96 (11%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAIANPYL----SCPII----SQIY 56
SN +AE+ AI+L LR I N + F +DSM +++ + YL C I S +
Sbjct: 14 SNQLAEVTAIVLALRKIGNFVPIVFR--TDSMYTINGLTR-YLGSWEDCGWIGVANSHAF 70
Query: 57 SAWCDLKTVGQYYVKLMWCPSHCGIRGNEAVDQAAK 92
A L K W H GI GNE D+ A+
Sbjct: 71 RAAAGLLRTRTAVTKFQWVKGHSGIEGNEMADRLAE 106
>gi|255984752|gb|ACU46448.1| reverse transcriptase [Human immunodeficiency virus 1]
Length = 160
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 45/91 (49%), Gaps = 11/91 (12%)
Query: 1 MFHCSNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSA 58
+ +N EL AILL L+ + +V+DS +L I A P S ++SQI
Sbjct: 69 LTDTTNQKTELQAILLALQD----SGLEVNIVTDSQYALGIIQAQPDKSESELVSQIIE- 123
Query: 59 WCDLKTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + + L W P+H GI GNE VD+
Sbjct: 124 ----QLIQKEKIYLAWVPAHKGIGGNEQVDK 150
>gi|331236740|ref|XP_003331028.1| hypothetical protein PGTG_12991 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 1101
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 37/63 (58%), Gaps = 3/63 (4%)
Query: 31 LVSDSMGSLSAIANPYLSCPIISQIYSA-WCDLKTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ SD+ G+L A+P +S QIY+ + ++ +G+ ++L WCP+H GI NE D
Sbjct: 150 IFSDNQGALMRSADP-ISLSSGQQIYAENFFRMRLLGRT-IRLYWCPAHEGIEANEKADT 207
Query: 90 AAK 92
AK
Sbjct: 208 LAK 210
>gi|425781333|gb|EKV19307.1| hypothetical protein PDIG_03370 [Penicillium digitatum PHI26]
Length = 648
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 24/70 (34%), Positives = 34/70 (48%), Gaps = 13/70 (18%)
Query: 30 LLVSDSMGSLSAIANPYLSCPIISQIYSA-------WCDLKTVGQYYVKLMWCPSHCGIR 82
++ +D+ +L AI NP + Q+Y WC + V+L W P+H GI
Sbjct: 350 VIFTDNQAALKAIKNPKMPS---GQVYLEGSLRLLDWCSKSKI---QVELRWIPAHEGIP 403
Query: 83 GNEAVDQAAK 92
GNE VD AK
Sbjct: 404 GNEHVDMLAK 413
>gi|14041623|emb|CAC38389.1| pol [Human immunodeficiency virus 1]
Length = 1009
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 34/92 (36%), Positives = 49/92 (53%), Gaps = 12/92 (13%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAIAN-PYLS-CPIISQIYSAWCDL 62
+N AEL+A+LL L+ K +V+DS L I++ P S P++ QI +L
Sbjct: 624 TNQKAELMAVLLALQDSKE----TVNIVTDSQYVLGIISSQPTQSESPLVQQIIE---EL 676
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ-AAKD 93
Q Y L W P+H GI GNE +D+ +KD
Sbjct: 677 TKKEQVY--LTWVPAHKGIGGNEKIDKLVSKD 706
>gi|37728012|gb|AAR02377.1| pol protein [Simian immunodeficiency virus]
Length = 1017
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 34/87 (39%), Positives = 46/87 (52%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAIANPYLSCPIISQ--IYSAWCDL 62
+N AEL A+LL LR P M +++DS L +A SCP IS+ I A
Sbjct: 635 TNQKAELEAVLLALRD--GPPQMN--IITDSQYVLGILA----SCPEISESPIVEAIIQ- 685
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + V L W P+H GI GNE VD+
Sbjct: 686 ELLKKDQVFLSWVPAHKGIGGNEEVDR 712
>gi|425776684|gb|EKV14892.1| Reverse transcriptase, putative [Penicillium digitatum PHI26]
Length = 994
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 24/70 (34%), Positives = 34/70 (48%), Gaps = 13/70 (18%)
Query: 30 LLVSDSMGSLSAIANPYLSCPIISQIYSA-------WCDLKTVGQYYVKLMWCPSHCGIR 82
++ +D+ +L AI NP + Q+Y WC + V+L W P+H GI
Sbjct: 829 VIFTDNQAALKAIKNPKMPS---GQVYLEGSLRVLDWCSKSKI---QVELRWIPAHEGIP 882
Query: 83 GNEAVDQAAK 92
GNE VD AK
Sbjct: 883 GNEHVDMLAK 892
>gi|242763116|ref|XP_002340512.1| hypothetical protein TSTA_065780 [Talaromyces stipitatus ATCC
10500]
gi|218723708|gb|EED23125.1| hypothetical protein TSTA_065780 [Talaromyces stipitatus ATCC
10500]
Length = 190
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 45/94 (47%), Gaps = 4/94 (4%)
Query: 9 AELIAILLCLR-SIKNHPAMRFLLVSDSMGSLSAIAN--PYLSCPIISQIYSAWCDLKTV 65
AEL+ + L +++ H ++ D+ +++ + + P + + Y A L
Sbjct: 40 AELMGVASALEWALERHLEGPIYVLLDAQAAINRLQSTAPGAGQSLALRAYGAASRLARS 99
Query: 66 GQYYVKLMWCPSHCGIRGNEAVDQAAKDPLLSPV 99
G+ V + W P H G+ GNE DQAAK + PV
Sbjct: 100 GRP-VTIQWVPRHSGVEGNEQADQAAKRASIRPV 132
>gi|301508600|gb|ADK78262.1| pol protein [Simian immunodeficiency virus]
Length = 1023
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 30/87 (34%), Positives = 45/87 (51%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAIA-NPYLS-CPIISQIYSAWCDL 62
+N AEL A+LL L+ + +V+DS +A +P S P++ QI
Sbjct: 647 TNQKAELEAVLLALKD----SGKKVNIVTDSQYVFGILAGSPDTSDSPLVQQIIE----- 697
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ +G+ V L W P+H GI GNE VD+
Sbjct: 698 QLIGKEEVYLSWVPAHKGIGGNEEVDK 724
>gi|427783065|gb|JAA56984.1| Putative tick transposon [Rhipicephalus pulchellus]
Length = 456
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 25/93 (26%), Positives = 42/93 (45%), Gaps = 2/93 (2%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAIANPYLSCPIISQIYSAWCDLKT 64
S+ AEL A+ L + R+ + +DS +L ++ + P ++ + T
Sbjct: 206 SSTAAELAALRTALCVLNREQPQRWSIFTDSKAALQSLLSALRHGPYEQLVFEIRHLIHT 265
Query: 65 VGQ--YYVKLMWCPSHCGIRGNEAVDQAAKDPL 95
+ + W PSHCG+ GNE D AA+ L
Sbjct: 266 SSEKGHQATFQWLPSHCGVIGNEHADNAARSAL 298
>gi|469241|gb|AAA44860.1| pol polyprotein, partial [Human immunodeficiency virus 1]
Length = 1033
Score = 39.7 bits (91), Expect = 0.20, Method: Composition-based stats.
Identities = 32/92 (34%), Positives = 49/92 (53%), Gaps = 12/92 (13%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAIAN-PYLS-CPIISQIYSAWCDL 62
+N AEL+A+L+ L+ K + +V+DS L I++ P S PI+ QI
Sbjct: 648 TNQKAELMAVLIALQDSKE----QVNIVTDSQYVLGIISSQPTQSDSPIVQQIIE----- 698
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ-AAKD 93
+ + V L W P+H GI GNE +D+ +KD
Sbjct: 699 ELTKKERVYLTWVPAHKGIGGNEKIDKLVSKD 730
>gi|110815944|sp|Q79666.3|POL_HV1MV RecName: Full=Gag-Pol polyprotein; AltName: Full=Pr160Gag-Pol;
Contains: RecName: Full=Matrix protein p17; Short=MA;
Contains: RecName: Full=Capsid protein p24; Short=CA;
Contains: RecName: Full=Spacer peptide p2; Contains:
RecName: Full=Nucleocapsid protein p7; Short=NC;
Contains: RecName: Full=Transframe peptide; Short=TF;
Contains: RecName: Full=p6-pol; Short=p6*; Contains:
RecName: Full=Protease; AltName: Full=PR; AltName:
Full=Retropepsin; Contains: RecName: Full=Reverse
transcriptase/ribonuclease H; AltName:
Full=Exoribonuclease H; AltName: Full=p66 RT; Contains:
RecName: Full=p51 RT; Contains: RecName: Full=p15;
Contains: RecName: Full=Integrase; Short=IN
Length = 1446
Score = 39.7 bits (91), Expect = 0.20, Method: Composition-based stats.
Identities = 32/92 (34%), Positives = 49/92 (53%), Gaps = 12/92 (13%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAIAN-PYLS-CPIISQIYSAWCDL 62
+N AEL+A+L+ L+ K + +V+DS L I++ P S PI+ QI
Sbjct: 1061 TNQKAELMAVLIALQDSKE----QVNIVTDSQYVLGIISSQPTQSDSPIVQQIIE----- 1111
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ-AAKD 93
+ + V L W P+H GI GNE +D+ +KD
Sbjct: 1112 ELTKKERVYLTWVPAHKGIGGNEKIDKLVSKD 1143
>gi|25166639|gb|AAN73447.1|AF484478_1 gag-pol fusion polyprotein [Human immunodeficiency virus 1]
Length = 1431
Score = 39.7 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 33/87 (37%), Positives = 45/87 (51%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N AEL AILL L+ +V+DS +L I A P S +++QI
Sbjct: 1056 TNQKAELHAILLALQD----SGSEVNIVTDSQYALGIIQAQPDRSESELVNQIIE----- 1106
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
K +G+ V L W P+H GI GNE VD+
Sbjct: 1107 KLIGKDKVYLSWVPAHKGIGGNEQVDK 1133
>gi|392872153|gb|AFM85346.1| polymerase polyprotein, partial [Simian immunodeficiency virus]
Length = 297
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 11/91 (12%)
Query: 1 MFHCSNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSA 58
+ +N AEL A+LL L+ R +V+DS L + +P S P++++I
Sbjct: 23 LTETTNQQAELQAVLLALQD----SGSRVNIVTDSQYVLGVLQGSPDQSESPLVTEIIE- 77
Query: 59 WCDLKTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + V L W P+H GI GNE VD+
Sbjct: 78 ----NLIQKEAVYLNWVPAHKGIGGNEEVDK 104
>gi|302594716|gb|ADL59546.1| reverse transcriptase [Human immunodeficiency virus 1]
Length = 120
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 48/91 (52%), Gaps = 11/91 (12%)
Query: 1 MFHCSNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSA 58
+ +N AEL AI L L+ ++ P + +V+DS +L I A P S +++QI
Sbjct: 29 LTETTNQKAELHAIQLALQ--ESGPEVN--IVTDSQYALGIIQAQPDRSESELVNQIIE- 83
Query: 59 WCDLKTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
K + + V L W P+H GI GNE VD+
Sbjct: 84 ----KLIEKERVYLSWVPAHKGIGGNEQVDK 110
>gi|242825810|ref|XP_002488515.1| conserved hypothetical protein [Talaromyces stipitatus ATCC 10500]
gi|218712333|gb|EED11759.1| conserved hypothetical protein [Talaromyces stipitatus ATCC 10500]
Length = 488
Score = 39.7 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 39/124 (31%), Positives = 54/124 (43%), Gaps = 22/124 (17%)
Query: 1 MFHCSNGIAELI----AILLCLR-------SIKNHPAMRFLLVSDSMGSLSAIANPYLSC 49
M H S IAELI AI L L+ S + ++SDS ++ AI NP +
Sbjct: 199 MAHWSIHIAELIGVYYAISLALKIFHQNGQSTRPGAGEAITILSDSKSAIQAIKNPRNTS 258
Query: 50 --PIISQIYSAWCDLKTVGQYYVKLMWCPSHCGIRGNEAVDQAAK--------DPLLSPV 99
+I I + +L + G ++L W P HC GN+A D AK P PV
Sbjct: 259 GQRVIEAINQSAYELDSRG-IPLRLQWIPGHCDDPGNDAADCLAKAAVGPTKIHPFCRPV 317
Query: 100 IEKK 103
+K
Sbjct: 318 SREK 321
>gi|255984636|gb|ACU46390.1| reverse transcriptase [Human immunodeficiency virus 1]
Length = 160
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 44/91 (48%), Gaps = 11/91 (12%)
Query: 1 MFHCSNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSA 58
+ +N EL AI L L+ +V+DS +L I A P S +++QI
Sbjct: 69 LTETTNQKTELHAIHLALQD----SGSEVNIVTDSQYALGIIQAQPDRSDSXLVNQIIE- 123
Query: 59 WCDLKTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
K +G+ V L W P+H GI GNE VD+
Sbjct: 124 ----KLIGKEXVYLSWVPAHKGIGGNEQVDK 150
>gi|395331595|gb|EJF63976.1| ribonuclease H-like protein, partial [Dichomitus squalens LYAD-421
SS1]
Length = 250
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 43/103 (41%), Gaps = 14/103 (13%)
Query: 3 HCSNGIAELIAILLCLRSI-KNHPAM-------------RFLLVSDSMGSLSAIANPYLS 48
H +N AELIAI+ L + N P + R+L + G P +
Sbjct: 142 HQTNNRAELIAIIRVLETTPTNRPLLIKTDSEYSIKCMTRWLWSWKAKGWKKIDGKPIKN 201
Query: 49 CPIISQIYSAWCDLKTVGQYYVKLMWCPSHCGIRGNEAVDQAA 91
P++ + + +TV + VK W +H G+ GNE D A
Sbjct: 202 LPLVKYLDVLLDERRTVSKQDVKFEWIKAHAGLSGNEDADALA 244
>gi|294947382|ref|XP_002785360.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239899133|gb|EER17156.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 1627
Score = 39.7 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 29/85 (34%), Positives = 44/85 (51%), Gaps = 8/85 (9%)
Query: 10 ELIAILLCLRSIKN--HPAMRFLLVSDSMGSLSAIANPYLSCPIISQIYSAWCDLKTVGQ 67
EL AI LR + + H + +LL +DS S+ I ++ + D+ +G
Sbjct: 1390 ELEAIRRALRWLSHSAHRGIEWLLFTDSQASIRTIRGRE-----ATERSAIARDIAHLGL 1444
Query: 68 YY-VKLMWCPSHCGIRGNEAVDQAA 91
+ V+L WCP H G++ NEAVDQ A
Sbjct: 1445 HVQVQLNWCPGHEGVQWNEAVDQLA 1469
>gi|15055097|gb|AAK82844.1| pol protein [Simian immunodeficiency virus]
Length = 1016
Score = 39.7 bits (91), Expect = 0.25, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 46/87 (52%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N AEL AILL L+ R +V+DS +L + A P S PI+ +I +
Sbjct: 641 TNQKAELEAILLALKD----SGPRANIVTDSQYALGILSATPDRSDNPIVREIIN----- 691
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + V L W P+H GI GNE +D+
Sbjct: 692 QMIAKEAVYLAWVPAHKGIGGNEQIDK 718
>gi|427798325|gb|JAA64614.1| Putative tick transposon, partial [Rhipicephalus pulchellus]
Length = 339
Score = 39.7 bits (91), Expect = 0.25, Method: Composition-based stats.
Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 2/87 (2%)
Query: 9 AELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAIANPYLSCPIISQIYSAWCDLKTVGQ- 67
+EL A+ + IK PA R+ + DS +L +++ ++ L V +
Sbjct: 205 SELAALRGAVNHIKEQPANRWAVFCDSKAALQCLSSALRRGSYEQLVWEIREMLHNVTEQ 264
Query: 68 -YYVKLMWCPSHCGIRGNEAVDQAAKD 93
+ V W PSHC I GN+ D+AA++
Sbjct: 265 GHDVVFQWLPSHCCISGNDLADEAARE 291
>gi|427798889|gb|JAA64896.1| Putative tick transposon, partial [Rhipicephalus pulchellus]
Length = 1199
Score = 39.3 bits (90), Expect = 0.26, Method: Composition-based stats.
Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 2/84 (2%)
Query: 9 AELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAIAN-PYLSCPIISQIYSAWCDLKTVGQ 67
AE AIL ++ I+ + ++ +DS+ + A+ P++ +YS C + T Q
Sbjct: 999 AEAYAILAAVKHIRELKLQKAVIYTDSLSVVKALKTLKKHRNPVLVSLYSLLCTIYTSKQ 1058
Query: 68 YYVKLMWCPSHCGIRGNEAVDQAA 91
+ V + W P H I+GN DQ A
Sbjct: 1059 HVV-VCWVPGHREIQGNVMADQLA 1081
>gi|427797379|gb|JAA64141.1| Putative tick transposon, partial [Rhipicephalus pulchellus]
Length = 544
Score = 39.3 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 3/86 (3%)
Query: 9 AELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAIANPYLSC--PIISQIYSAWCDLKTVG 66
+EL A+L ++ + ++ + DS +L + + ++SQI + CD T
Sbjct: 295 SELAALLAAMKFVMQESPSKWAIFCDSKAALQCVRSLRRGNYHQLVSQI-NEICDRATNQ 353
Query: 67 QYYVKLMWCPSHCGIRGNEAVDQAAK 92
+ + W P HCGI GN D AA+
Sbjct: 354 GHDIVFQWLPGHCGISGNHLADNAAR 379
>gi|2736044|gb|AAB94039.1| reverse transcriptase [Aphonopelma sp. WDB-1998]
Length = 488
Score = 39.3 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Query: 31 LVSDSMGSLSAIANPYLSCPIISQIYSAWCDLKTVGQYYVKLMWCPSHCGIRGNEAVDQA 90
++SDS +L A+ P I I +K G+ + L W H G GNE D+A
Sbjct: 309 IISDSQSALKALYRTQEVSPTIRDIKRTITTIKRQGRQ-IDLYWTKGHAGQAGNEMADRA 367
Query: 91 AKDPLLS 97
AK+ ++S
Sbjct: 368 AKEAVIS 374
>gi|427780027|gb|JAA55465.1| Putative tick transposon [Rhipicephalus pulchellus]
Length = 859
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
Query: 18 LRSIKNHPAMRFLLVSDSMGSLSAIANPYLSCPIISQIYSAWCDLKTVGQYYVKLMWCPS 77
LR +KN A R +++SD ++ ++ + Q ++ D G + W PS
Sbjct: 638 LRKLKNGFAQRAVIISDCKSAMQQLSRGTPTNNFCRQSLASLKDATKKG-XNITFQWIPS 696
Query: 78 HCGIRGNEAVDQAAKDPL 95
H G+ GNE D A + L
Sbjct: 697 HVGVSGNERADALANEAL 714
>gi|29367071|gb|AAO22466.1| pol protein [Simian immunodeficiency virus]
Length = 1012
Score = 39.3 bits (90), Expect = 0.28, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 49/87 (56%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAIAN-PYLS-CPIISQIYSAWCDL 62
+N AEL AILL L+ + P + +V+DS ++ I++ P +S PI++QI
Sbjct: 642 TNQKAELQAILLALKD--SGPKVN--IVTDSQYAMGIISSSPEISDNPIVNQIIE----- 692
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + V L W P+H GI GNE D+
Sbjct: 693 QMISKEAVYLNWVPAHKGIGGNEEEDK 719
>gi|358376801|dbj|GAA93312.1| reverse transcriptase [Aspergillus kawachii IFO 4308]
Length = 316
Score = 39.3 bits (90), Expect = 0.30, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Query: 31 LVSDSMGSLSAIANPYLSC--PIISQIYSAWCDLKTVGQYYVKLMWCPSHCGIRGNEAVD 88
++SDSM +L AI NP II I A ++ G ++L W P HC GN+ D
Sbjct: 98 ILSDSMSALQAIRNPANKSGQRIIRAILQAASEMIARG-IPIRLHWVPGHCNDPGNDEPD 156
Query: 89 QAAKD 93
+ AK+
Sbjct: 157 RLAKE 161
>gi|254728701|gb|ACT79529.1| pol protein [Simian immunodeficiency virus]
Length = 287
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 45/92 (48%), Gaps = 13/92 (14%)
Query: 1 MFHCSNGIAELIAILLCLRSIKNHPAMRFLLVSDS---MGSLSAIANPYLSCPIISQIYS 57
+ +N AEL AILL L+ K + +V+DS +G L + S P++ I
Sbjct: 17 LTETTNQQAELQAILLALKDAKE----KVNIVTDSQYVLGILQGTPDQSDS-PLVEXIIQ 71
Query: 58 AWCDLKTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + V L W P+H GI GNE VD+
Sbjct: 72 -----ELMNKEAVYLNWVPAHKGIGGNEEVDK 98
>gi|427783055|gb|JAA56979.1| Putative tick transposon [Rhipicephalus pulchellus]
Length = 485
Score = 39.3 bits (90), Expect = 0.32, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 38/86 (44%), Gaps = 2/86 (2%)
Query: 21 IKNHPAMRFLLVSDSMGSLSAIANPYLSCPIISQIYSAWCDLKTVGQ--YYVKLMWCPSH 78
+ P ++ + SDS +L ++ + P ++ L + ++V W PSH
Sbjct: 243 VNREPPQQWSIFSDSKAALQSMLSALRRGPYEQLVFEIRGLLHASHEKGHHVTFQWLPSH 302
Query: 79 CGIRGNEAVDQAAKDPLLSPVIEKKI 104
CG+ GNE D AA+ L E I
Sbjct: 303 CGVIGNEHADNAARAALEDTTQEDTI 328
>gi|294951625|ref|XP_002787074.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239901664|gb|EER18870.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 370
Score = 39.3 bits (90), Expect = 0.32, Method: Composition-based stats.
Identities = 31/86 (36%), Positives = 40/86 (46%), Gaps = 10/86 (11%)
Query: 10 ELIAILLCLR--SIKNHPAMRFLLVSDSMGSLSAIANPYLS--CPIISQIYSAWCDLKTV 65
EL AI LR S H + +LL +DS S+ I + I I +K
Sbjct: 121 ELEAIRRALRWLSYSAHRGIEWLLFTDSQASIRTIRGREATERSAIARDIAHLSLHVK-- 178
Query: 66 GQYYVKLMWCPSHCGIRGNEAVDQAA 91
V+L WCP H G++ NEAVDQ A
Sbjct: 179 ----VQLNWCPGHEGVQWNEAVDQLA 200
>gi|294889789|ref|XP_002772958.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239877569|gb|EER04774.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 382
Score = 39.3 bits (90), Expect = 0.32, Method: Composition-based stats.
Identities = 31/86 (36%), Positives = 40/86 (46%), Gaps = 10/86 (11%)
Query: 10 ELIAILLCLR--SIKNHPAMRFLLVSDSMGSLSAIANPYLS--CPIISQIYSAWCDLKTV 65
EL AI LR S H + +LL +DS S+ I + I I +K
Sbjct: 237 ELEAIRRALRWLSYSAHRGIEWLLFTDSQASIRTIRGREATERSAIARDIAHLSLHVK-- 294
Query: 66 GQYYVKLMWCPSHCGIRGNEAVDQAA 91
V+L WCP H G++ NEAVDQ A
Sbjct: 295 ----VQLNWCPGHEGVQWNEAVDQLA 316
>gi|407840400|gb|EKG00492.1| hypothetical protein TCSYLVIO_008558, partial [Trypanosoma cruzi]
Length = 292
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 44/101 (43%), Gaps = 7/101 (6%)
Query: 9 AELIAILLCLRSIK----NHPAMRFLLVSDSMGSLSAIANPYLSCP--IISQIYSAWCDL 62
E A+LL L + H L+V+DS L+A+ LS QI+ L
Sbjct: 93 TESRALLLALEKLMIPRIQHRRKTLLVVTDSQSLLAALNKGPLSQTDWTEEQIWQRLLTL 152
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQAAKDPLLSPVIEKK 103
VG + V L +C HCG+ NE DQ A + S +K
Sbjct: 153 TCVG-WSVHLQFCYGHCGVHANELADQHATQTMESGQYTEK 192
>gi|358376861|dbj|GAA93349.1| transposon I factor [Aspergillus kawachii IFO 4308]
Length = 362
Score = 39.3 bits (90), Expect = 0.33, Method: Composition-based stats.
Identities = 32/97 (32%), Positives = 43/97 (44%), Gaps = 13/97 (13%)
Query: 9 AELIAILLCL----------RSIKNHPAMRFLLVSDSMGSLSAIANP--YLSCPIISQIY 56
AELI IL + R A ++SDSM +L AI P II I
Sbjct: 95 AELIGILYAINLINRIVLQQRRAGQKRARTVTILSDSMSALLAIQKPGNKSGQQIIYAIL 154
Query: 57 SAWCDLKTVGQYYVKLMWCPSHCGIRGNEAVDQAAKD 93
A + +T G ++L W P H I GN+ D+ AK+
Sbjct: 155 QAAKNTRTHG-VTIRLQWVPGHSEILGNDTADRLAKE 190
>gi|358376848|dbj|GAA93341.1| transposon I factor, partial [Aspergillus kawachii IFO 4308]
Length = 595
Score = 39.3 bits (90), Expect = 0.33, Method: Composition-based stats.
Identities = 32/97 (32%), Positives = 43/97 (44%), Gaps = 13/97 (13%)
Query: 9 AELIAILLCL----------RSIKNHPAMRFLLVSDSMGSLSAIANP--YLSCPIISQIY 56
AELI IL + R A ++SDSM +L AI P II I
Sbjct: 328 AELIGILYAINLINRIVLQQRRAGQKRARTVTILSDSMSALLAIQKPGNKSGQQIIYAIL 387
Query: 57 SAWCDLKTVGQYYVKLMWCPSHCGIRGNEAVDQAAKD 93
A + +T G ++L W P H I GN+ D+ AK+
Sbjct: 388 QAAKNTRTHG-VTIRLQWVPGHSEILGNDTADRLAKE 423
>gi|427783937|gb|JAA57420.1| Putative tick transposon [Rhipicephalus pulchellus]
Length = 460
Score = 39.3 bits (90), Expect = 0.34, Method: Composition-based stats.
Identities = 14/25 (56%), Positives = 18/25 (72%)
Query: 68 YYVKLMWCPSHCGIRGNEAVDQAAK 92
+++ W PSHCGI GNE DQAA+
Sbjct: 271 HHITFQWLPSHCGIIGNERADQAAR 295
>gi|242779688|ref|XP_002479439.1| hypothetical protein TSTA_023400 [Talaromyces stipitatus ATCC
10500]
gi|218719586|gb|EED19005.1| hypothetical protein TSTA_023400 [Talaromyces stipitatus ATCC
10500]
Length = 153
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Query: 51 IISQIYSAWCDLKTVGQYYVKLMWCPSHCGIRGNEAVDQAAKD 93
I+ I W +L++ G V + W P+H GI GNE D AAK+
Sbjct: 7 ILGSIAEKWDELRSQG-VQVTIHWIPAHQGIEGNERADIAAKE 48
>gi|289469870|gb|ADC96590.1| pol protein [Human immunodeficiency virus 1]
Length = 848
Score = 38.9 bits (89), Expect = 0.35, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AILL L+ + +V+DS +L I A P S ++SQI
Sbjct: 473 TNQKTELXAILLALQD----SGLEVNIVTDSQYALGIIQAQPDRSESEVVSQIIE----- 523
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + V L W P+H GI GNE VD+
Sbjct: 524 QLINKEKVYLAWVPAHKGIGGNEQVDK 550
>gi|242826126|ref|XP_002488578.1| conserved hypothetical protein [Talaromyces stipitatus ATCC 10500]
gi|218712396|gb|EED11822.1| conserved hypothetical protein [Talaromyces stipitatus ATCC 10500]
Length = 599
Score = 38.9 bits (89), Expect = 0.36, Method: Composition-based stats.
Identities = 34/105 (32%), Positives = 50/105 (47%), Gaps = 14/105 (13%)
Query: 1 MFHCSNGIAELI----AILLCLR-------SIKNHPAMRFLLVSDSMGSLSAIANPYLSC 49
M H S IAELI AI L L+ S + ++S+S ++ AI NP +
Sbjct: 343 MAHWSIHIAELIGVYYAISLALKIFHQNGQSTRPGAGEAITILSNSKSAIQAIKNPRNTS 402
Query: 50 P--IISQIYSAWCDLKTVGQYYVKLMWCPSHCGIRGNEAVDQAAK 92
+I I + +L + G ++L W P HC GN+A D+ AK
Sbjct: 403 RQRVIEAINQSAYELDSRG-IPLRLQWIPGHCDDLGNDAADRLAK 446
>gi|407915534|gb|EKG09113.1| hypothetical protein MPH_13896 [Macrophomina phaseolina MS6]
Length = 288
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 32/71 (45%), Gaps = 3/71 (4%)
Query: 24 HPAMRFLLVSDSMGSLSAIANPYLSCP--IISQIYSAWCDLKTVGQYYVKLMWCPSHCGI 81
H R L +D+ +L A+ P ++ I L+ G +K W PSH G+
Sbjct: 36 HNKRRIALFTDNQAALRALVTPGEQSEQYLLRSITPKLTGLQQQG-VSIKFHWVPSHRGV 94
Query: 82 RGNEAVDQAAK 92
GNE D+ AK
Sbjct: 95 PGNEEADKLAK 105
>gi|328710861|ref|XP_003244383.1| PREDICTED: hypothetical protein LOC100570071 [Acyrthosiphon pisum]
Length = 90
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 20/34 (58%), Gaps = 6/34 (17%)
Query: 73 MWCPSHCGIRGNEAVDQAAK------DPLLSPVI 100
MW P HC I GNE D+AAK +PL SPV
Sbjct: 1 MWIPGHCNIEGNELADKAAKQAHLANNPLTSPVF 34
>gi|307194212|gb|EFN76629.1| hypothetical protein EAI_07164 [Harpegnathos saltator]
Length = 110
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 44/95 (46%), Gaps = 18/95 (18%)
Query: 9 AELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAIANP----------YLSCPIISQIYSA 58
AE AIL L +I + + ++ SDS+ L+ +P Y+ II +Y
Sbjct: 24 AESFAILHTLVAISDSNCKKAVIASDSLSVLTFFNSPDIKGKYHPLVYMMRDIIHNLY-- 81
Query: 59 WCDLKTVGQYYVKLMWCPSHCGIRGNEAVDQAAKD 93
L+ + + +W P H I GNEAVD AK+
Sbjct: 82 ---LQNIT---IAFIWIPEHHNIPGNEAVDLLAKE 110
>gi|331245769|ref|XP_003335520.1| hypothetical protein PGTG_16963 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 1463
Score = 38.9 bits (89), Expect = 0.40, Method: Composition-based stats.
Identities = 25/73 (34%), Positives = 37/73 (50%), Gaps = 7/73 (9%)
Query: 30 LLVSDSMGSLSAIANPYLSCP---IISQIYSAWCDL-KTVGQYYVKLMWCPSHCGIRGNE 85
++ D+ G +S NP P I +I S+ L + +G + +WCP H I GNE
Sbjct: 1223 MIFMDNQGVISRTKNPRSPKPGQWIFEKIDSSISLLPEGLG---ISFVWCPGHVNIPGNE 1279
Query: 86 AVDQAAKDPLLSP 98
DQ A++ L SP
Sbjct: 1280 MADQLAREALESP 1292
>gi|134140572|gb|ABO61045.1| pol protein [Simian immunodeficiency virus]
Length = 1011
Score = 38.9 bits (89), Expect = 0.40, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 48/87 (55%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAIAN-PYLSC-PIISQIYSAWCDL 62
+N AEL A+LL L+ + P+M +V+DS L +A+ P S P++ +I
Sbjct: 629 TNQKAELEAVLLALK--EGPPSMN--IVTDSQYVLGIVASQPQESTSPLVEEIIQ----- 679
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + V L W P+H GI GNE VD+
Sbjct: 680 QLLTKEAVYLSWVPAHKGIGGNEDVDK 706
>gi|49887134|gb|AAT68811.1| pol protein [Simian immunodeficiency virus]
Length = 1040
Score = 38.9 bits (89), Expect = 0.40, Method: Composition-based stats.
Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAIANPYLSC--PIISQIYSAWCDL 62
+N AEL A+L+ L+ + P + +V+DS +L + N S P++ QI
Sbjct: 667 TNQKAELEAVLMALQD--SGPEVN--IVTDSQYALGILMNCPTSSEHPVVEQIMQ----- 717
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
K + + + + W P+H GI GN+ VDQ
Sbjct: 718 KAMEKEKIYITWVPAHKGIGGNQEVDQ 744
>gi|383860150|ref|XP_003705554.1| PREDICTED: leucine-rich repeat-containing protein 15-like
[Megachile rotundata]
Length = 635
Score = 38.9 bits (89), Expect = 0.41, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 41/86 (47%), Gaps = 1/86 (1%)
Query: 8 IAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAIANPYLSCPIISQIYSAWCDLKTVGQ 67
+ EL AI ++S F + DS ++SAI + S +I + A+ +
Sbjct: 79 LCELQAITHAIKSTLTDQNTNFAIFCDSTSAISAIQKLWTSDFVIQECQEAYTR-SSQKN 137
Query: 68 YYVKLMWCPSHCGIRGNEAVDQAAKD 93
+ +MW SH I GN+ D+AAK+
Sbjct: 138 NSITIMWILSHIDITGNDKADRAAKE 163
>gi|339507238|gb|AEJ81031.1| pol protein [Human immunodeficiency virus 1]
Length = 656
Score = 38.9 bits (89), Expect = 0.41, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 45/87 (51%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AILL L+ + +V+DS +L I A P S +++QI
Sbjct: 569 TNQKTELQAILLALQD----SGLEVNIVTDSQYALGIIQAQPDKSESDLVNQIIE----- 619
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ +G+ V L W P+H GI GNE VD+
Sbjct: 620 QLIGKEKVYLAWVPAHKGIGGNEQVDK 646
>gi|261336121|dbj|BAI44754.1| pol-like protein [Alternaria alternata]
Length = 1186
Score = 38.9 bits (89), Expect = 0.43, Method: Composition-based stats.
Identities = 15/24 (62%), Positives = 18/24 (75%)
Query: 70 VKLMWCPSHCGIRGNEAVDQAAKD 93
V + W P+H GI GNEA DQAAK+
Sbjct: 1093 VTVRWIPAHVGIEGNEAADQAAKE 1116
>gi|393233568|gb|EJD41138.1| hypothetical protein AURDEDRAFT_40523, partial [Auricularia
delicata TFB-10046 SS5]
Length = 102
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 46/92 (50%), Gaps = 10/92 (10%)
Query: 9 AELIAILLCLRSIKNHPAMRFLL-VSDSMGSLSAIANPYLSCP-----IISQIYSAWCDL 62
EL ILL LR + + +R +L V + + SAI + P I + I++A L
Sbjct: 12 GELFGILLALRLVAD---IRGILDVIICLDNQSAIIRVHEPSPKSGQIITTAIHAALARL 68
Query: 63 -KTVGQYYVKLMWCPSHCGIRGNEAVDQAAKD 93
K + ++L+W P H G+ GNE D AKD
Sbjct: 69 SKARPGFRLQLVWVPGHEGVDGNELADLHAKD 100
>gi|68521975|gb|AAY98578.1| pol protein [Human immunodeficiency virus 1]
gi|212383356|gb|ACJ25956.1| pol protein [Human immunodeficiency virus 1]
Length = 999
Score = 38.9 bits (89), Expect = 0.44, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 45/87 (51%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N AELIAI L L+ + +V+DS +L I A P S ++SQI
Sbjct: 624 TNQKAELIAIRLALQD----SGLEVNIVTDSQYALGIIQAQPDKSESELVSQIIE----- 674
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + + L W P+H GI GNE VD+
Sbjct: 675 QLIKKERIYLSWVPAHKGIGGNEQVDK 701
>gi|83774376|dbj|BAE64500.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 1292
Score = 38.5 bits (88), Expect = 0.45, Method: Composition-based stats.
Identities = 33/97 (34%), Positives = 45/97 (46%), Gaps = 14/97 (14%)
Query: 9 AELI----AILLCLRSIKNHPAMRFL-------LVSDSMGSLSAIANP--YLSCPIISQI 55
AELI AI L L+ + + P ++ DSM +L AI NP II
Sbjct: 1019 AELIGIFYAISLVLKIVSSRPRTPTTSQQEPATILCDSMSALQAIRNPGNKSGQRIIHAN 1078
Query: 56 YSAWCDLKTVGQYYVKLMWCPSHCGIRGNEAVDQAAK 92
A +LK G ++L W P HC GN+A D+ A+
Sbjct: 1079 LQAAAELKARG-IPLRLQWIPGHCDDPGNDAADKLAR 1114
>gi|317156327|ref|XP_001825633.2| reverse transcriptase [Aspergillus oryzae RIB40]
Length = 1393
Score = 38.5 bits (88), Expect = 0.45, Method: Composition-based stats.
Identities = 33/97 (34%), Positives = 45/97 (46%), Gaps = 14/97 (14%)
Query: 9 AELI----AILLCLRSIKNHPAMRFL-------LVSDSMGSLSAIANP--YLSCPIISQI 55
AELI AI L L+ + + P ++ DSM +L AI NP II
Sbjct: 1120 AELIGIFYAISLVLKIVSSRPRTPTTSQQEPATILCDSMSALQAIRNPGNKSGQRIIHAN 1179
Query: 56 YSAWCDLKTVGQYYVKLMWCPSHCGIRGNEAVDQAAK 92
A +LK G ++L W P HC GN+A D+ A+
Sbjct: 1180 LQAAAELKARG-IPLRLQWIPGHCDDPGNDAADKLAR 1215
>gi|242818213|ref|XP_002487072.1| hypothetical protein TSTA_054710 [Talaromyces stipitatus ATCC
10500]
gi|218713537|gb|EED12961.1| hypothetical protein TSTA_054710 [Talaromyces stipitatus ATCC
10500]
Length = 216
Score = 38.5 bits (88), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Query: 51 IISQIYSAWCDLKTVGQYYVKLMWCPSHCGIRGNEAVDQAAKD 93
I+ I W +L++ G V + W P+H GI GNE D AAK+
Sbjct: 30 ILGSIAEKWDELRSQG-VQVTIHWIPAHQGIEGNERADIAAKE 71
>gi|322702355|gb|EFY94018.1| reverse transcriptase, putative [Metarhizium anisopliae ARSEF 23]
Length = 639
Score = 38.5 bits (88), Expect = 0.46, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 28 RFLLVSDSMGSLSAIANPY--LSCPIISQIYSAWCDLKTVGQYYVKLMWCPSHCGIRGNE 85
+ L+ +D+ ++ ++A P ++ I +L+ G V+ W P+H GI GNE
Sbjct: 417 KVLIYTDNQAAVRSVARPRGESGSYLLQDITRRMQELQAQG-LTVEDRWIPAHTGIHGNE 475
Query: 86 AVDQAAKD 93
A DQAAK+
Sbjct: 476 AADQAAKN 483
>gi|67901980|ref|XP_681246.1| hypothetical protein AN7977.2 [Aspergillus nidulans FGSC A4]
gi|40740441|gb|EAA59631.1| hypothetical protein AN7977.2 [Aspergillus nidulans FGSC A4]
gi|259480727|tpe|CBF73635.1| TPA: conserved hypothetical protein [Aspergillus nidulans FGSC A4]
Length = 306
Score = 38.5 bits (88), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 54/110 (49%), Gaps = 16/110 (14%)
Query: 9 AELIAILLCLRSIKNHP----AMRFLLVSDSMGSLSAIANPYLSCP-------IISQIYS 57
AE+I + LR+ P + + +++ D++ + S +A+ Y P SQ+ +
Sbjct: 58 AEIIGAVEGLRAALGQPCVGYSTQLVILLDNLAAASLLAS-YRPTPHRHGLSETFSQLAA 116
Query: 58 AWCD---LKTVGQYYVKLMWCPSHCGIRGNEAVDQAAK-DPLLSPVIEKK 103
W + + T+ + +++ W P H GI GNE D+ AK P I+KK
Sbjct: 117 QWMESPSILTMQRKPLQVRWIPGHSGIAGNELADKLAKLGPEYQTPIQKK 166
>gi|427781953|gb|JAA56428.1| Putative tick transposon [Rhipicephalus pulchellus]
Length = 455
Score = 38.5 bits (88), Expect = 0.46, Method: Composition-based stats.
Identities = 25/94 (26%), Positives = 45/94 (47%), Gaps = 4/94 (4%)
Query: 2 FHCSNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAIANPYLSCP---IISQIYSA 58
+ S AEL+A+ L+ + + + DS +L ++ + ++++I
Sbjct: 198 YSTSTTAAELVALRAALQFVIEQTPNSWAIFCDSKAALQSLPSALRHGSHEQLVAEIRQV 257
Query: 59 WCDLKTVGQYYVKLMWCPSHCGIRGNEAVDQAAK 92
D+ G + V W PSHCGI+GN+ D AA+
Sbjct: 258 HHDIIEKG-HQVIFQWMPSHCGIQGNDQADAAAR 290
>gi|317031412|ref|XP_003188771.1| reverse transcriptase [Aspergillus niger CBS 513.88]
Length = 1653
Score = 38.5 bits (88), Expect = 0.47, Method: Composition-based stats.
Identities = 32/97 (32%), Positives = 43/97 (44%), Gaps = 13/97 (13%)
Query: 9 AELIAILLCL----------RSIKNHPAMRFLLVSDSMGSLSAIANPYLSC--PIISQIY 56
AELI IL + R A ++SDS +L AI P II I
Sbjct: 1384 AELIGILYAINLINRIVLQQRRAGQKRARTVTILSDSTSALLAIQKPGSKSGQQIIYAIL 1443
Query: 57 SAWCDLKTVGQYYVKLMWCPSHCGIRGNEAVDQAAKD 93
A + +T G ++L W P H I GN+A D+ AK+
Sbjct: 1444 QAAKNTRTHG-VTIRLQWVPGHSEILGNDAADRLAKE 1479
>gi|317031356|ref|XP_001393251.2| reverse transcriptase [Aspergillus niger CBS 513.88]
Length = 1677
Score = 38.5 bits (88), Expect = 0.47, Method: Composition-based stats.
Identities = 32/97 (32%), Positives = 43/97 (44%), Gaps = 13/97 (13%)
Query: 9 AELIAILLCL----------RSIKNHPAMRFLLVSDSMGSLSAIANPYLSC--PIISQIY 56
AELI IL + R A ++SDS +L AI P II I
Sbjct: 1421 AELIGILYAINLINRIVLQQRRAGQKRARTVTILSDSTSALLAIQKPGSKSGQQIIYAIL 1480
Query: 57 SAWCDLKTVGQYYVKLMWCPSHCGIRGNEAVDQAAKD 93
A + +T G ++L W P H I GN+A D+ AK+
Sbjct: 1481 QAAKNTRTHG-VTIRLQWVPGHSEILGNDAADRLAKE 1516
>gi|317031342|ref|XP_003188764.1| reverse transcriptase [Aspergillus niger CBS 513.88]
Length = 1016
Score = 38.5 bits (88), Expect = 0.47, Method: Composition-based stats.
Identities = 32/97 (32%), Positives = 43/97 (44%), Gaps = 13/97 (13%)
Query: 9 AELIAILLCL----------RSIKNHPAMRFLLVSDSMGSLSAIANPYLSC--PIISQIY 56
AELI IL + R A ++SDS +L AI P II I
Sbjct: 747 AELIGILYAINLINRIVLQQRRAGQKRARTVTILSDSTSALLAIQKPGSKSGQQIIYAIL 806
Query: 57 SAWCDLKTVGQYYVKLMWCPSHCGIRGNEAVDQAAKD 93
A + +T G ++L W P H I GN+A D+ AK+
Sbjct: 807 QAAKNTRTHG-VTIRLQWVPGHSEILGNDAADRLAKE 842
>gi|134077756|emb|CAK45797.1| unnamed protein product [Aspergillus niger]
Length = 1536
Score = 38.5 bits (88), Expect = 0.47, Method: Composition-based stats.
Identities = 32/97 (32%), Positives = 43/97 (44%), Gaps = 13/97 (13%)
Query: 9 AELIAILLCL----------RSIKNHPAMRFLLVSDSMGSLSAIANPYLSC--PIISQIY 56
AELI IL + R A ++SDS +L AI P II I
Sbjct: 1267 AELIGILYAINLINRIVLQQRRAGQKRARTVTILSDSTSALLAIQKPGSKSGQQIIYAIL 1326
Query: 57 SAWCDLKTVGQYYVKLMWCPSHCGIRGNEAVDQAAKD 93
A + +T G ++L W P H I GN+A D+ AK+
Sbjct: 1327 QAAKNTRTHG-VTIRLQWVPGHSEILGNDAADRLAKE 1362
>gi|134077781|emb|CAK45821.1| unnamed protein product [Aspergillus niger]
Length = 1644
Score = 38.5 bits (88), Expect = 0.47, Method: Composition-based stats.
Identities = 32/97 (32%), Positives = 43/97 (44%), Gaps = 13/97 (13%)
Query: 9 AELIAILLCL----------RSIKNHPAMRFLLVSDSMGSLSAIANPYLSC--PIISQIY 56
AELI IL + R A ++SDS +L AI P II I
Sbjct: 1375 AELIGILYAINLINRIVLQQRRAGQKRARTVTILSDSTSALLAIQKPGSKSGQQIIYAIL 1434
Query: 57 SAWCDLKTVGQYYVKLMWCPSHCGIRGNEAVDQAAKD 93
A + +T G ++L W P H I GN+A D+ AK+
Sbjct: 1435 QAAKNTRTHG-VTIRLQWVPGHSEILGNDAADRLAKE 1470
>gi|134077855|emb|CAK40096.1| unnamed protein product [Aspergillus niger]
Length = 1244
Score = 38.5 bits (88), Expect = 0.47, Method: Composition-based stats.
Identities = 32/97 (32%), Positives = 43/97 (44%), Gaps = 13/97 (13%)
Query: 9 AELIAILLCL----------RSIKNHPAMRFLLVSDSMGSLSAIANPYLSC--PIISQIY 56
AELI IL + R A ++SDS +L AI P II I
Sbjct: 975 AELIGILYAINLINRIVLQQRRAGQKRARTVTILSDSTSALLAIQKPGSKSGQQIIYAIL 1034
Query: 57 SAWCDLKTVGQYYVKLMWCPSHCGIRGNEAVDQAAKD 93
A + +T G ++L W P H I GN+A D+ AK+
Sbjct: 1035 QAAKNTRTHG-VTIRLQWVPGHSEILGNDAADRLAKE 1070
>gi|357395183|gb|AET76089.1| pol protein, partial [Human immunodeficiency virus 1]
Length = 1003
Score = 38.5 bits (88), Expect = 0.47, Method: Composition-based stats.
Identities = 32/87 (36%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AILL L+ + +V+DS +L I A P S I+SQI
Sbjct: 628 TNQKTELQAILLALQD----SGLEVNIVTDSQYALGIIQAQPDRSESEIVSQIIE----- 678
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + V L W P+H GI GNE VD+
Sbjct: 679 QLIKKERVYLAWVPAHKGIGGNEQVDK 705
>gi|357395173|gb|AET76080.1| pol protein, partial [Human immunodeficiency virus 1]
gi|357395193|gb|AET76098.1| pol protein, partial [Human immunodeficiency virus 1]
gi|357395203|gb|AET76107.1| pol protein, partial [Human immunodeficiency virus 1]
gi|357395213|gb|AET76116.1| pol protein, partial [Human immunodeficiency virus 1]
gi|357395440|gb|AET76315.1| pol protein, partial [Human immunodeficiency virus 1]
Length = 1003
Score = 38.5 bits (88), Expect = 0.47, Method: Composition-based stats.
Identities = 32/87 (36%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AILL L+ + +V+DS +L I A P S I+SQI
Sbjct: 628 TNQKTELQAILLALQD----SGLEVNIVTDSQYALGIIQAQPDRSESEIVSQIIE----- 678
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + V L W P+H GI GNE VD+
Sbjct: 679 QLIKKERVYLAWVPAHKGIGGNEQVDK 705
>gi|242775779|ref|XP_002478708.1| conserved hypothetical protein [Talaromyces stipitatus ATCC 10500]
gi|218722327|gb|EED21745.1| conserved hypothetical protein [Talaromyces stipitatus ATCC 10500]
Length = 294
Score = 38.5 bits (88), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 41/87 (47%), Gaps = 4/87 (4%)
Query: 9 AELIAILLCLR-SIKNHPAMRFLLVSDSMGSLSAI--ANPYLSCPIISQIYSAWCDLKTV 65
AEL+ + L +++ P ++ D+ ++ + P ++ + + A L
Sbjct: 26 AELVGVATALEWALERQPLGPIWVLLDAQNAIDRLRSTRPGPGQALVLRAHRAAEKLALR 85
Query: 66 GQYYVKLMWCPSHCGIRGNEAVDQAAK 92
GQ V + W P H GI GNE DQAAK
Sbjct: 86 GQP-VTIQWVPGHSGIEGNEQADQAAK 111
>gi|60651878|gb|AAX32968.1| pol protein [Human immunodeficiency virus 1]
Length = 1003
Score = 38.5 bits (88), Expect = 0.48, Method: Composition-based stats.
Identities = 31/89 (34%), Positives = 44/89 (49%), Gaps = 11/89 (12%)
Query: 3 HCSNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWC 60
H +N EL AI L L+ + +V+DS +L I A P S ++SQI
Sbjct: 626 HTTNQKTELQAIYLALQD----SGLEVNIVTDSQYALGIIQAQPDKSESELVSQIIE--- 678
Query: 61 DLKTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + V L W P+H GI GNE VD+
Sbjct: 679 --QLINKEKVYLAWVPAHKGIGGNEQVDK 705
>gi|425783431|gb|EKV21281.1| hypothetical protein PDIP_08070 [Penicillium digitatum Pd1]
Length = 268
Score = 38.5 bits (88), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 34/70 (48%), Gaps = 13/70 (18%)
Query: 30 LLVSDSMGSLSAIANPYLSCPIISQIYSA-------WCDLKTVGQYYVKLMWCPSHCGIR 82
++ +D+ +L AI NP + Q+Y WC + V+L W P+H GI
Sbjct: 139 VIFTDNQAALKAIQNPKMPS---GQVYLEGSLRLLDWCSKSKI---QVELRWIPAHEGIP 192
Query: 83 GNEAVDQAAK 92
GNE VD AK
Sbjct: 193 GNEHVDMLAK 202
>gi|10436122|gb|AAG16802.1| pol protein [Human immunodeficiency virus 1]
gi|10436132|gb|AAG16811.1| pol protein [Human immunodeficiency virus 1]
gi|300431893|gb|ADK12794.1| pol protein [Human immunodeficiency virus 1]
Length = 1006
Score = 38.5 bits (88), Expect = 0.49, Method: Composition-based stats.
Identities = 32/87 (36%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AILL L+ + +V+DS +L I A P S I+SQI
Sbjct: 631 TNQKTELQAILLALQD----SGLEVNIVTDSQYALGIIQAQPDKSESEIVSQIIE----- 681
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + V L W P+H GI GNE VD+
Sbjct: 682 QLIKKEKVYLTWVPAHKGIGGNEQVDK 708
>gi|319444184|gb|ADV58196.1| pol protein [Human immunodeficiency virus 1]
Length = 1006
Score = 38.5 bits (88), Expect = 0.49, Method: Composition-based stats.
Identities = 32/87 (36%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AILL L+ + +V+DS +L I A P S I+SQI
Sbjct: 631 TNQKTELQAILLALQD----SGLEVNIVTDSQYALGIIQAQPDKSESEIVSQIIE----- 681
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + V L W P+H GI GNE VD+
Sbjct: 682 QLIKKEKVYLTWVPAHKGIGGNEQVDK 708
>gi|319444174|gb|ADV58187.1| pol protein [Human immunodeficiency virus 1]
Length = 1006
Score = 38.5 bits (88), Expect = 0.49, Method: Composition-based stats.
Identities = 32/87 (36%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AILL L+ + +V+DS +L I A P S I+SQI
Sbjct: 631 TNQKTELQAILLALQD----SGLEVNIVTDSQYALGIIQAQPDKSESEIVSQIIE----- 681
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + V L W P+H GI GNE VD+
Sbjct: 682 QLIKKEKVYLTWVPAHKGIGGNEQVDK 708
>gi|300431903|gb|ADK12803.1| pol protein [Human immunodeficiency virus 1]
Length = 1006
Score = 38.5 bits (88), Expect = 0.49, Method: Composition-based stats.
Identities = 32/87 (36%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AILL L+ + +V+DS +L I A P S I+SQI
Sbjct: 631 TNQKTELQAILLALQD----SGLEVNIVTDSQYALGIIQAQPDKSESEIVSQIIE----- 681
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + V L W P+H GI GNE VD+
Sbjct: 682 QLIKKEKVYLTWVPAHKGIGGNEQVDK 708
>gi|300431883|gb|ADK12785.1| pol protein [Human immunodeficiency virus 1]
Length = 1006
Score = 38.5 bits (88), Expect = 0.49, Method: Composition-based stats.
Identities = 32/87 (36%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AILL L+ + +V+DS +L I A P S I+SQI
Sbjct: 631 TNQKTELQAILLALQD----SGLEVNIVTDSQYALGIIQAQPDKSESEIVSQIIE----- 681
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + V L W P+H GI GNE VD+
Sbjct: 682 QLIKKEKVYLTWVPAHKGIGGNEQVDK 708
>gi|300431863|gb|ADK12767.1| pol protein [Human immunodeficiency virus 1]
gi|300431873|gb|ADK12776.1| pol protein [Human immunodeficiency virus 1]
Length = 1006
Score = 38.5 bits (88), Expect = 0.49, Method: Composition-based stats.
Identities = 32/87 (36%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AILL L+ + +V+DS +L I A P S I+SQI
Sbjct: 631 TNQKTELQAILLALQD----SGLEVNIVTDSQYALGIIQAQPDKSESEIVSQIIE----- 681
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + V L W P+H GI GNE VD+
Sbjct: 682 QLIKKEKVYLTWVPAHKGIGGNEQVDK 708
>gi|113171663|gb|ABI30934.1| pol protein [Human immunodeficiency virus 1]
Length = 1003
Score = 38.5 bits (88), Expect = 0.49, Method: Composition-based stats.
Identities = 32/87 (36%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AILL L+ + +V+DS +L I A P S I+SQI
Sbjct: 628 TNQKTELQAILLALQD----SGLEVNIVTDSQYALGIIQAQPDKSESEIVSQIIE----- 678
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + V L W P+H GI GNE VD+
Sbjct: 679 QLIKKEKVYLTWVPAHKGIGGNEQVDK 705
>gi|37221450|gb|AAQ89854.1| pol protein [Human immunodeficiency virus 1]
Length = 657
Score = 38.5 bits (88), Expect = 0.49, Method: Composition-based stats.
Identities = 32/87 (36%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AILL L+ + +V+DS +L I A P S I+SQI
Sbjct: 572 TNQKTELQAILLALQD----SGLEVNIVTDSQYALGIIQAQPDKSESEIVSQIIE----- 622
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + V L W P+H GI GNE VD+
Sbjct: 623 QLIKKEKVYLTWVPAHKGIGGNEQVDK 649
>gi|3163931|emb|CAA06947.1| pol polyprotein precursor [Human immunodeficiency virus 1]
Length = 1006
Score = 38.5 bits (88), Expect = 0.49, Method: Composition-based stats.
Identities = 32/87 (36%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AILL L+ + +V+DS +L I A P S I+SQI
Sbjct: 631 TNQKTELQAILLALQD----SGLEVNIVTDSQYALGIIQAQPDKSESEIVSQIIE----- 681
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + V L W P+H GI GNE VD+
Sbjct: 682 QLIKKEKVYLTWVPAHKGIGGNEQVDK 708
>gi|156052327|ref|XP_001592090.1| hypothetical protein SS1G_06329 [Sclerotinia sclerotiorum 1980]
gi|154704109|gb|EDO03848.1| hypothetical protein SS1G_06329 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 118
Score = 38.5 bits (88), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 47/99 (47%), Gaps = 15/99 (15%)
Query: 8 IAELIAILLCLRSI-----KNHPAMRFLLVSDSMGSLSAIANP------YLSCPIISQIY 56
+AE+ I+ L + K + R ++ +D+ ++ P Y+ IS I
Sbjct: 11 VAEVQGIVSALEMVIEDAKKGNRRKRAVVFTDNQAAIRTFQMPTGRSGAYIIARAISLID 70
Query: 57 SAWCDLKTVGQYYVKLMWCPSHCGIRGNEAVDQAAKDPL 95
DL + ++L W P+H G+ GNEA D+AAK+ +
Sbjct: 71 KIQQDL----ELEIELRWIPAHIGLCGNEAADRAAKEDV 105
>gi|6358691|gb|AAF07317.1|AF188114_2 Pol protein [Simian immunodeficiency virus]
Length = 1023
Score = 38.5 bits (88), Expect = 0.50, Method: Composition-based stats.
Identities = 30/87 (34%), Positives = 43/87 (49%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAIANPYLSC--PIISQIYSAWCDL 62
+N AEL A+LL LR K+ R +V+DS + ++ P++ QI +
Sbjct: 649 TNQQAELEAVLLALRDSKS----RVNIVTDSQYVIKVLSQRPTETEHPVVKQIIE---EC 701
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
K Q Y L W P+H GI GN+ VD
Sbjct: 702 KKKDQVY--LGWVPAHKGIGGNQEVDH 726
>gi|427781951|gb|JAA56427.1| Putative tick transposon [Rhipicephalus pulchellus]
Length = 455
Score = 38.5 bits (88), Expect = 0.51, Method: Composition-based stats.
Identities = 25/94 (26%), Positives = 45/94 (47%), Gaps = 4/94 (4%)
Query: 2 FHCSNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAIANPYLSCP---IISQIYSA 58
+ S AEL+A+ L+ + + + DS +L ++ + ++++I
Sbjct: 198 YSTSTTAAELVALRAALQFVIEQTPNSWAIFCDSKAALQSLPSALRHGSHEQLVAEIRQV 257
Query: 59 WCDLKTVGQYYVKLMWCPSHCGIRGNEAVDQAAK 92
D+ G + V W PSHCGI+GN+ D AA+
Sbjct: 258 HHDIIEKG-HTVIFQWMPSHCGIQGNDQADAAAR 290
>gi|19335965|emb|CAC38421.2| gag-pol fusion polyprotein precursor [Human immunodeficiency virus 1]
Length = 1445
Score = 38.5 bits (88), Expect = 0.51, Method: Composition-based stats.
Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 12/92 (13%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAIAN-PYLS-CPIISQIYSAWCDL 62
+N AEL+A+LL L+ K +V+DS L I++ P S P++ QI +L
Sbjct: 1060 TNQKAELMAVLLALQDSKE----TVNIVTDSQYVLGIISSQPTQSESPLVQQIIE---EL 1112
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ-AAKD 93
Q + L W P+H GI GNE +D+ +KD
Sbjct: 1113 TQKEQVF--LTWVPAHKGIGGNEKIDKLVSKD 1142
>gi|426192179|gb|EKV42117.1| hypothetical protein AGABI2DRAFT_56522, partial [Agaricus bisporus
var. bisporus H97]
Length = 102
Score = 38.5 bits (88), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 22/38 (57%)
Query: 66 GQYYVKLMWCPSHCGIRGNEAVDQAAKDPLLSPVIEKK 103
G +KL W +H G+ GNE VD+AAK+ EKK
Sbjct: 1 GTVEIKLEWISAHSGVEGNEEVDKAAKEAADGTSSEKK 38
>gi|226348730|gb|ACO50684.1| pol protein [Human immunodeficiency virus 1]
Length = 725
Score = 38.5 bits (88), Expect = 0.52, Method: Composition-based stats.
Identities = 32/87 (36%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AILL L+ + LV+DS +L I A P S ++SQI
Sbjct: 406 TNQKTELQAILLALQD----SGLEVNLVTDSQYALGIIQAQPDKSESELVSQIIE----- 456
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + V L W P+H GI GNE VD+
Sbjct: 457 QLIKKEKVYLTWVPAHKGIGGNEQVDK 483
>gi|10436141|gb|AAG16819.1| pol protein [Human immunodeficiency virus 1]
gi|300431913|gb|ADK12812.1| pol protein [Human immunodeficiency virus 1]
gi|300431923|gb|ADK12821.1| pol protein [Human immunodeficiency virus 1]
gi|300431933|gb|ADK12830.1| pol protein [Human immunodeficiency virus 1]
gi|300431943|gb|ADK12839.1| pol protein [Human immunodeficiency virus 1]
Length = 1006
Score = 38.5 bits (88), Expect = 0.53, Method: Composition-based stats.
Identities = 32/87 (36%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AILL L+ + +V+DS +L I A P S I+SQI
Sbjct: 631 TNQKTELQAILLALQD----SGLEVNIVTDSQYALGIIQAQPDKSESEIVSQIIE----- 681
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + V L W P+H GI GNE VD+
Sbjct: 682 QLIKKEKVYLAWVPAHKGIGGNEQVDK 708
>gi|10436151|gb|AAG16828.1| pol protein [Human immunodeficiency virus 1]
Length = 1006
Score = 38.5 bits (88), Expect = 0.53, Method: Composition-based stats.
Identities = 32/87 (36%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AILL L+ + +V+DS +L I A P S I+SQI
Sbjct: 631 TNQKTELQAILLALQD----SGLEVNIVTDSQYALGIIQAQPDKSESEIVSQIIE----- 681
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + V L W P+H GI GNE VD+
Sbjct: 682 QLIKKEKVYLAWVPAHKGIGGNEQVDK 708
>gi|10436103|gb|AAG16785.1| pol protein [Human immunodeficiency virus 1]
Length = 1006
Score = 38.5 bits (88), Expect = 0.53, Method: Composition-based stats.
Identities = 32/87 (36%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AILL L+ + +V+DS +L I A P S I+SQI
Sbjct: 631 TNQKTELQAILLALQD----SGLEVNIVTDSQYALGIIQAQPDKSESEIVSQIIE----- 681
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + V L W P+H GI GNE VD+
Sbjct: 682 QLIKKEKVYLAWVPAHKGIGGNEQVDK 708
>gi|10436160|gb|AAG16836.1| pol protein [Human immunodeficiency virus 1]
gi|300431953|gb|ADK12848.1| pol protein [Human immunodeficiency virus 1]
gi|300431962|gb|ADK12856.1| pol protein [Human immunodeficiency virus 1]
gi|300431971|gb|ADK12864.1| pol protein [Human immunodeficiency virus 1]
gi|300431980|gb|ADK12872.1| pol protein [Human immunodeficiency virus 1]
Length = 1006
Score = 38.5 bits (88), Expect = 0.53, Method: Composition-based stats.
Identities = 32/87 (36%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AILL L+ + +V+DS +L I A P S I+SQI
Sbjct: 631 TNQKTELQAILLALQD----SGLEVNIVTDSQYALGIIQAQPDKSESEIVSQIIE----- 681
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + V L W P+H GI GNE VD+
Sbjct: 682 QLIKKEKVYLAWVPAHKGIGGNEQVDK 708
>gi|10436170|gb|AAG16844.1| pol protein [Human immunodeficiency virus 1]
Length = 1003
Score = 38.5 bits (88), Expect = 0.53, Method: Composition-based stats.
Identities = 32/87 (36%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AILL L+ + +V+DS +L I A P S I+SQI
Sbjct: 628 TNQKTELQAILLALQD----SGLEVNIVTDSQYALGIIQAQPDKSESEIVSQIIE----- 678
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + V L W P+H GI GNE VD+
Sbjct: 679 QLIKKEKVYLAWVPAHKGIGGNEQVDK 705
>gi|10436113|gb|AAG16794.1| pol protein [Human immunodeficiency virus 1]
gi|300431818|gb|ADK12727.1| pol protein [Human immunodeficiency virus 1]
gi|300431827|gb|ADK12735.1| pol protein [Human immunodeficiency virus 1]
gi|300431836|gb|ADK12743.1| pol protein [Human immunodeficiency virus 1]
gi|300431845|gb|ADK12751.1| pol protein [Human immunodeficiency virus 1]
gi|300431854|gb|ADK12759.1| pol protein [Human immunodeficiency virus 1]
Length = 1003
Score = 38.5 bits (88), Expect = 0.53, Method: Composition-based stats.
Identities = 32/87 (36%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AILL L+ + +V+DS +L I A P S I+SQI
Sbjct: 628 TNQKTELQAILLALQD----SGLEVNIVTDSQYALGIIQAQPDKSESEIVSQIIE----- 678
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + V L W P+H GI GNE VD+
Sbjct: 679 QLIKKEKVYLAWVPAHKGIGGNEQVDK 705
>gi|339507270|gb|AEJ81047.1| pol protein [Human immunodeficiency virus 1]
Length = 656
Score = 38.5 bits (88), Expect = 0.53, Method: Composition-based stats.
Identities = 32/87 (36%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AILL L+ + +V+DS +L I A P S I+SQI
Sbjct: 569 TNQKTELQAILLALQD----SGLEVNIVTDSQYALGIIQAQPDKSESEIVSQIIE----- 619
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + V L W P+H GI GNE VD+
Sbjct: 620 QLIKKEKVYLAWVPAHKGIGGNEQVDK 646
>gi|319444241|gb|ADV58247.1| pol protein [Human immunodeficiency virus 1]
Length = 1006
Score = 38.5 bits (88), Expect = 0.53, Method: Composition-based stats.
Identities = 32/87 (36%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AILL L+ + +V+DS +L I A P S I+SQI
Sbjct: 631 TNQKTELQAILLALQD----SGLEVNIVTDSQYALGIIQAQPDKSESEIVSQIIE----- 681
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + V L W P+H GI GNE VD+
Sbjct: 682 QLIKKEKVYLAWVPAHKGIGGNEQVDK 708
>gi|319444232|gb|ADV58239.1| pol protein [Human immunodeficiency virus 1]
Length = 1006
Score = 38.5 bits (88), Expect = 0.53, Method: Composition-based stats.
Identities = 32/87 (36%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AILL L+ + +V+DS +L I A P S I+SQI
Sbjct: 631 TNQKTELQAILLALQD----SGLEVNIVTDSQYALGIIQAQPDKSESEIVSQIIE----- 681
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + V L W P+H GI GNE VD+
Sbjct: 682 QLIKKEKVYLAWVPAHKGIGGNEQVDK 708
>gi|319444223|gb|ADV58231.1| pol protein [Human immunodeficiency virus 1]
Length = 1006
Score = 38.5 bits (88), Expect = 0.53, Method: Composition-based stats.
Identities = 32/87 (36%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AILL L+ + +V+DS +L I A P S I+SQI
Sbjct: 631 TNQKTELQAILLALQD----SGLEVNIVTDSQYALGIIQAQPDKSESEIVSQIIE----- 681
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + V L W P+H GI GNE VD+
Sbjct: 682 QLIKKEKVYLAWVPAHKGIGGNEQVDK 708
>gi|319444213|gb|ADV58222.1| pol protein [Human immunodeficiency virus 1]
Length = 1006
Score = 38.5 bits (88), Expect = 0.53, Method: Composition-based stats.
Identities = 32/87 (36%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AILL L+ + +V+DS +L I A P S I+SQI
Sbjct: 631 TNQKTELQAILLALQD----SGLEVNIVTDSQYALGIIQAQPDKSESEIVSQIIE----- 681
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + V L W P+H GI GNE VD+
Sbjct: 682 QLIKKEKVYLAWVPAHKGIGGNEQVDK 708
>gi|319444203|gb|ADV58213.1| pol protein [Human immunodeficiency virus 1]
Length = 1006
Score = 38.5 bits (88), Expect = 0.53, Method: Composition-based stats.
Identities = 32/87 (36%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AILL L+ + +V+DS +L I A P S I+SQI
Sbjct: 631 TNQKTELQAILLALQD----SGLEVNIVTDSQYALGIIQAQPDKSESEIVSQIIE----- 681
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + V L W P+H GI GNE VD+
Sbjct: 682 QLIKKEKVYLAWVPAHKGIGGNEQVDK 708
>gi|319444164|gb|ADV58178.1| pol protein [Human immunodeficiency virus 1]
Length = 1006
Score = 38.5 bits (88), Expect = 0.53, Method: Composition-based stats.
Identities = 32/87 (36%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AILL L+ + +V+DS +L I A P S I+SQI
Sbjct: 631 TNQKTELQAILLALQD----SGLEVNIVTDSQYALGIIQAQPDKSESEIVSQIIE----- 681
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + V L W P+H GI GNE VD+
Sbjct: 682 QLIKKEKVYLAWVPAHKGIGGNEQVDK 708
>gi|319444154|gb|ADV58169.1| pol protein [Human immunodeficiency virus 1]
Length = 1003
Score = 38.5 bits (88), Expect = 0.53, Method: Composition-based stats.
Identities = 32/87 (36%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AILL L+ + +V+DS +L I A P S I+SQI
Sbjct: 628 TNQKTELQAILLALQD----SGLEVNIVTDSQYALGIIQAQPDKSESEIVSQIIE----- 678
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + V L W P+H GI GNE VD+
Sbjct: 679 QLIKKEKVYLAWVPAHKGIGGNEQVDK 705
>gi|319444146|gb|ADV58162.1| pol protein [Human immunodeficiency virus 1]
Length = 1003
Score = 38.5 bits (88), Expect = 0.53, Method: Composition-based stats.
Identities = 32/87 (36%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AILL L+ + +V+DS +L I A P S I+SQI
Sbjct: 628 TNQKTELQAILLALQD----SGLEVNIVTDSQYALGIIQAQPDKSESEIVSQIIE----- 678
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + V L W P+H GI GNE VD+
Sbjct: 679 QLIKKEKVYLAWVPAHKGIGGNEQVDK 705
>gi|319444137|gb|ADV58154.1| pol protein [Human immunodeficiency virus 1]
Length = 1003
Score = 38.5 bits (88), Expect = 0.53, Method: Composition-based stats.
Identities = 32/87 (36%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AILL L+ + +V+DS +L I A P S I+SQI
Sbjct: 628 TNQKTELQAILLALQD----SGLEVNIVTDSQYALGIIQAQPDKSESEIVSQIIE----- 678
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + V L W P+H GI GNE VD+
Sbjct: 679 QLIKKEKVYLAWVPAHKGIGGNEQVDK 705
>gi|300432009|gb|ADK12898.1| pol protein [Human immunodeficiency virus 1]
gi|300432018|gb|ADK12906.1| pol protein [Human immunodeficiency virus 1]
Length = 1006
Score = 38.5 bits (88), Expect = 0.53, Method: Composition-based stats.
Identities = 32/87 (36%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AILL L+ + +V+DS +L I A P S I+SQI
Sbjct: 631 TNQKTELQAILLALQD----SGLEVNIVTDSQYALGIIQAQPDKSESEIVSQIIE----- 681
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + V L W P+H GI GNE VD+
Sbjct: 682 QLIKKEKVYLAWVPAHKGIGGNEQVDK 708
>gi|300431989|gb|ADK12880.1| pol protein [Human immunodeficiency virus 1]
gi|300431999|gb|ADK12889.1| pol protein [Human immunodeficiency virus 1]
Length = 1006
Score = 38.5 bits (88), Expect = 0.53, Method: Composition-based stats.
Identities = 32/87 (36%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AILL L+ + +V+DS +L I A P S I+SQI
Sbjct: 631 TNQKTELQAILLALQD----SGLEVNIVTDSQYALGIIQAQPDKSESEIVSQIIE----- 681
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + V L W P+H GI GNE VD+
Sbjct: 682 QLIKKEKVYLAWVPAHKGIGGNEQVDK 708
>gi|113171655|gb|ABI30927.1| pol protein [Human immunodeficiency virus 1]
Length = 1003
Score = 38.5 bits (88), Expect = 0.53, Method: Composition-based stats.
Identities = 32/87 (36%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AILL L+ + +V+DS +L I A P S I+SQI
Sbjct: 628 TNQKTELQAILLALQD----SGLEVNIVTDSQYALGIIQAQPDKSESEIVSQIIE----- 678
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + V L W P+H GI GNE VD+
Sbjct: 679 QLIKKEKVYLAWVPAHKGIGGNEQVDK 705
>gi|222428291|gb|ACM49963.1| pol protein [Human immunodeficiency virus 1]
Length = 1004
Score = 38.5 bits (88), Expect = 0.55, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AILL L+ + +V+DS +L I A P S ++SQI
Sbjct: 629 TNQKTELQAILLALQD----SGLEVNIVTDSQYALGIIQAQPDRSESEVVSQIIE----- 679
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + V L W P+H GI GNE VD+
Sbjct: 680 QLINKEKVYLAWVPAHKGIGGNEQVDK 706
>gi|339507240|gb|AEJ81032.1| pol protein [Human immunodeficiency virus 1]
Length = 656
Score = 38.5 bits (88), Expect = 0.56, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AILL L+ + +V+DS +L I A P S ++SQI
Sbjct: 569 TNQKTELQAILLALQD----SGLEVNIVTDSQYALGIIQAQPDXSESELVSQIIE----- 619
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + V L W P+H GI GNE VD+
Sbjct: 620 QLINKEKVYLAWVPAHKGIGGNEQVDK 646
>gi|321466291|gb|EFX77287.1| hypothetical protein DAPPUDRAFT_247862 [Daphnia pulex]
Length = 211
Score = 38.5 bits (88), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Query: 33 SDSMGSLSAIA-NPYLSCPIISQIYSAWCDLKTVGQYYVKLMWCPSHCGIRGNEAVDQAA 91
SDS ++ IA N + ++ LK+ G L W PSH GI GNE D+ A
Sbjct: 28 SDSSTAIKTIASNTHTDNDTVATTRELIASLKSSG-TLTTLAWIPSHTGIEGNETADRLA 86
Query: 92 KDPLLSP 98
+ +P
Sbjct: 87 SNECANP 93
>gi|242827513|ref|XP_002488845.1| transposon I factor, putative [Talaromyces stipitatus ATCC 10500]
gi|218712006|gb|EED11435.1| transposon I factor, putative [Talaromyces stipitatus ATCC 10500]
Length = 1139
Score = 38.5 bits (88), Expect = 0.58, Method: Composition-based stats.
Identities = 27/83 (32%), Positives = 38/83 (45%), Gaps = 11/83 (13%)
Query: 31 LVSDSMGSLSAIANPYLSC--PIISQIYSAWCDLKTVGQYYVKLMWCPSHCGIRGNEAVD 88
++SDS +L AI NP +I I + +L + G ++L W P HC GN+A D
Sbjct: 891 ILSDSKSALQAIRNPSNKSGQRVIQAINQSAYELDSRG-ISLRLQWIPGHCDDPGNDAAD 949
Query: 89 QAAKD--------PLLSPVIEKK 103
AK P PV +K
Sbjct: 950 HLAKTAVGLDKTHPFCRPVSREK 972
>gi|306477993|gb|ADM89371.1| pol protein [Human immunodeficiency virus 1]
Length = 848
Score = 38.1 bits (87), Expect = 0.60, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AI L LR ++ +V+DS +L I A P S ++SQI
Sbjct: 473 TNQKTELQAIYLALRD----SGLKVNIVTDSQYALGIIQAQPDRSESELVSQIIE----- 523
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + V L W P+H GI GNE VD+
Sbjct: 524 QLIKKEKVYLAWVPAHKGIGGNEQVDK 550
>gi|3808262|gb|AAC69298.1| pol protein, partial [Human immunodeficiency virus 1]
Length = 1001
Score = 38.1 bits (87), Expect = 0.66, Method: Composition-based stats.
Identities = 32/87 (36%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AILL L+ +V+DS +L I A P S +++QI
Sbjct: 626 TNQKTELHAILLALQD----SGSEVNIVTDSQYALGIIQAQPDRSESELVNQIIE----- 676
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
K +G+ V L W P+H GI GNE VD+
Sbjct: 677 KLIGKDKVYLSWVPAHKGIGGNEQVDK 703
>gi|409181601|gb|AFV26823.1| pol protein, partial [Human immunodeficiency virus 1]
Length = 1003
Score = 38.1 bits (87), Expect = 0.66, Method: Composition-based stats.
Identities = 32/87 (36%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AILL L+ +V+DS +L I A P S +++QI
Sbjct: 628 TNQKTELHAILLALQD----SGSEVNIVTDSQYALGIIQAQPDRSDSELVNQIIE----- 678
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
K +G+ V L W P+H GI GNE VD+
Sbjct: 679 KLIGKDKVYLSWVPAHKGIGGNEQVDK 705
>gi|148745851|emb|CAK49314.1| gag-pol fusion polyprotein precursor [Human immunodeficiency virus
1]
Length = 964
Score = 38.1 bits (87), Expect = 0.66, Method: Composition-based stats.
Identities = 32/87 (36%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AILL L+ +V+DS +L I A P S +++QI
Sbjct: 628 TNQKTELHAILLALQD----SGSEVNIVTDSQYALGIIHAQPDRSDSELVNQIIE----- 678
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
K +G+ V L W P+H GI GNE VD+
Sbjct: 679 KLIGKDKVYLSWVPAHKGIGGNEQVDK 705
>gi|39777415|gb|AAR30993.1| pol protein [Human immunodeficiency virus 1]
Length = 1003
Score = 38.1 bits (87), Expect = 0.66, Method: Composition-based stats.
Identities = 32/87 (36%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AILL L+ +V+DS +L I A P S +++QI
Sbjct: 628 TNQKTELHAILLALQD----SGSEVNIVTDSQYALGIIQAQPDRSESELVNQIIE----- 678
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
K +G+ V L W P+H GI GNE VD+
Sbjct: 679 KLIGKDKVYLSWVPAHKGIGGNEQVDK 705
>gi|443733872|gb|ELU18078.1| hypothetical protein CAPTEDRAFT_197082 [Capitella teleta]
Length = 400
Score = 38.1 bits (87), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 36 MGSLSAIANPYLSCPIISQIYSAWCDLKTVGQYYVKLMWCPSHCGIRGNEAVDQAAKDPL 95
+ L A++N ++ + I + +L G+ V +WCPS+ GI GNE D+ AK L
Sbjct: 235 LRRLIALSNCDITHHYLLSILNKQNNLDRKGKLVV-FIWCPSYVGILGNEVADRLAKQAL 293
Query: 96 LSPVIE 101
+ PV +
Sbjct: 294 VMPVTK 299
Score = 35.0 bits (79), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 13/24 (54%), Positives = 16/24 (66%)
Query: 72 LMWCPSHCGIRGNEAVDQAAKDPL 95
+ WCPSH G+ GNE D AK+ L
Sbjct: 103 MTWCPSHVGVMGNERADLLAKEAL 126
>gi|113171671|gb|ABI30941.1| pol protein [Human immunodeficiency virus 1]
Length = 1003
Score = 38.1 bits (87), Expect = 0.73, Method: Composition-based stats.
Identities = 32/86 (37%), Positives = 43/86 (50%), Gaps = 11/86 (12%)
Query: 6 NGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDLK 63
N EL AILL L+ + +V+DS +L I A P S I+SQI +
Sbjct: 629 NQKTELQAILLALQD----SGLEVNIVTDSQYALGIIQAQPDKSESEIVSQIIE-----Q 679
Query: 64 TVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + V L W P+H GI GNE VD+
Sbjct: 680 LIKKEKVYLTWVPAHKGIGGNEQVDK 705
>gi|1549144|dbj|BAA07467.1| ORF2 [Bombyx mori]
Length = 1162
Score = 37.7 bits (86), Expect = 0.77, Method: Composition-based stats.
Identities = 30/98 (30%), Positives = 46/98 (46%), Gaps = 9/98 (9%)
Query: 3 HCSNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAIANPYLSCPIISQIYSAW--C 60
+C+ AEL+A+ ++ + F + SDS +L + N P+ I C
Sbjct: 922 YCTVYQAELLALSYAVKEAQLRNGSTFGVFSDSKAALLTVINHGSLHPLAVDIRKMLKQC 981
Query: 61 DL--KTVGQYYVKLMWCPSHCGIRGNEAVDQAAKDPLL 96
L KTV Y++K +H G+ GNE DQ AK+ L
Sbjct: 982 ALQNKTVALYWIK-----AHAGLEGNERADQLAKEAAL 1014
>gi|261336140|dbj|BAI44772.1| pol-like protein [Alternaria alternata]
Length = 1295
Score = 37.7 bits (86), Expect = 0.78, Method: Composition-based stats.
Identities = 15/24 (62%), Positives = 19/24 (79%)
Query: 70 VKLMWCPSHCGIRGNEAVDQAAKD 93
V + W P+H GI GNEAVD+AAK+
Sbjct: 1090 VTVRWIPAHVGIPGNEAVDKAAKE 1113
>gi|256011622|gb|ACU55667.1| pol protein [Human immunodeficiency virus 1]
Length = 1002
Score = 37.7 bits (86), Expect = 0.79, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AILL L+ + +V+DS +L I A P S ++SQI
Sbjct: 627 TNQKTELQAILLALQD----SGLEVNIVTDSQYALGIIQAQPDKSESEVVSQIIE----- 677
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + V L W P+H GI GNE VD+
Sbjct: 678 QLIKKERVYLAWVPAHKGIGGNEQVDK 704
>gi|358376063|dbj|GAA92634.1| hypothetical protein AKAW_10748 [Aspergillus kawachii IFO 4308]
Length = 399
Score = 37.7 bits (86), Expect = 0.79, Method: Composition-based stats.
Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 50 PIISQIYSAWCDLKTVGQYYVKLMWCPSHCGIRGNEAVDQAAKD 93
PI I+ + +LK G ++L W P HCG GNE D+ AK+
Sbjct: 169 PIHEAIHQSAAELKARG-IPLRLQWVPGHCGNPGNETADRLAKE 211
>gi|242825777|ref|XP_002488508.1| hypothetical protein TSTA_109310 [Talaromyces stipitatus ATCC
10500]
gi|218712326|gb|EED11752.1| hypothetical protein TSTA_109310 [Talaromyces stipitatus ATCC
10500]
Length = 466
Score = 37.7 bits (86), Expect = 0.79, Method: Composition-based stats.
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 31 LVSDSMGSLSAIANPYLSC--PIISQIYSAWCDLKTVGQYYVKLMWCPSHCGIRGNEAVD 88
++SDSM +L AI+N II + A +LK G + L W P HC GNEA +
Sbjct: 207 ILSDSMSALQAISNTRNKSGQRIIQAVQQAAQELKARG-IPLCLQWMPGHCDNPGNEAAN 265
Query: 89 QAAKD 93
+ AK+
Sbjct: 266 RLAKE 270
>gi|119196745|ref|XP_001248976.1| hypothetical protein CIMG_02747 [Coccidioides immitis RS]
Length = 2000
Score = 37.7 bits (86), Expect = 0.80, Method: Composition-based stats.
Identities = 28/92 (30%), Positives = 46/92 (50%), Gaps = 8/92 (8%)
Query: 9 AELIAILLCLRSIKNHPAM-----RFLLVSDSMGSLSAIANPYLSCP--IISQIYSAWCD 61
AEL ++L L I + A + + +D+ ++ AI NP S I+ + A
Sbjct: 1622 AELRGLVLALEIILDLHATGATPRKCAIFTDNQAAIQAIRNPKHSSGQYILLEAIQALDM 1681
Query: 62 LKTVGQYYVKLMWCPSHCGIRGNEAVDQAAKD 93
L+ G + V+ W P+H G+ GNE D+ AK+
Sbjct: 1682 LRNFG-WEVQFRWIPAHVGVPGNEEADRMAKE 1712
>gi|339507236|gb|AEJ81030.1| pol protein [Human immunodeficiency virus 1]
Length = 656
Score = 37.7 bits (86), Expect = 0.80, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AILL L+ + +V+DS +L I A P S ++SQI
Sbjct: 569 TNQKTELQAILLALQD----SGLEVNIVTDSQYALGIIQAQPDKSESELVSQIIE----- 619
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + V L W P+H GI GNE VD+
Sbjct: 620 QLINKEKVYLAWVPAHKGIGGNEQVDK 646
>gi|36365543|gb|AAQ86747.1| pol protein [Human immunodeficiency virus 1]
Length = 1003
Score = 37.7 bits (86), Expect = 0.80, Method: Composition-based stats.
Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL+AILL L+ + +V+DS +L I A P S +++QI
Sbjct: 628 TNQKTELLAILLALQD----SGLEVNIVTDSQYALGIIQAQPDRSESEVVNQIIE----- 678
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + + L W P+H GI GNE VD+
Sbjct: 679 QLIKKEKIYLAWVPAHKGIGGNEQVDK 705
>gi|86277638|gb|ABC88355.1| pol protein [Human immunodeficiency virus 1]
Length = 1003
Score = 37.7 bits (86), Expect = 0.83, Method: Composition-based stats.
Identities = 32/87 (36%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N AEL AI L L+ + +V+DS +L I A P S I+SQI
Sbjct: 628 TNQKAELQAIWLALQD----SGLEVNIVTDSQYALGIIQAQPDKSESEIVSQIIE----- 678
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + V L W P+H GI GNE VD+
Sbjct: 679 QLIKKEKVYLAWVPAHKGIGGNEQVDK 705
>gi|378812644|gb|AFC60570.1| pol protein, partial [Human immunodeficiency virus]
Length = 1003
Score = 37.7 bits (86), Expect = 0.85, Method: Composition-based stats.
Identities = 32/87 (36%), Positives = 43/87 (49%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AILL L+ +V+DS +L I A P S ++ QI
Sbjct: 628 TNQKTELHAILLALQD----SGSEVNIVTDSQYALGIIQAQPDRSESELVDQIIE----- 678
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
K +G+ V L W P+H GI GNE VD+
Sbjct: 679 KLIGKDKVYLSWVPAHKGIGGNEQVDK 705
>gi|407832444|gb|EKF98449.1| hypothetical protein TCSYLVIO_010651, partial [Trypanosoma cruzi]
Length = 86
Score = 37.7 bits (86), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 35/77 (45%), Gaps = 3/77 (3%)
Query: 23 NHPAMRFLLVSDSMGSLSAIANPYLSCP--IISQIYSAWCDLKTVGQYYVKLMWCPSHCG 80
H L+V+DS L+A+ LS QI+ L G + V L +C HCG
Sbjct: 6 RHRRKTLLVVTDSQSLLAALNKGPLSQTDWTEDQIWQRLLTLTCAG-WSVHLQFCYGHCG 64
Query: 81 IRGNEAVDQAAKDPLLS 97
+ GNE DQ A + S
Sbjct: 65 VHGNEPADQYATQTMES 81
>gi|326475951|gb|EGD99960.1| hypothetical protein TESG_08624 [Trichophyton tonsurans CBS 112818]
Length = 1605
Score = 37.7 bits (86), Expect = 0.87, Method: Composition-based stats.
Identities = 25/79 (31%), Positives = 37/79 (46%), Gaps = 5/79 (6%)
Query: 19 RSIKNHPAMR--FLLVSDSMGSLSAIANPYLSCP--IISQIYSAWCDLKTVGQYYVKLMW 74
R +N P + ++SDS L + N I+ I + DLK G ++L W
Sbjct: 1353 RDKRNRPKTKRTVTILSDSKSGLQTLTNQRNGSGQHIVRAIAKSARDLKAHG-VSIRLQW 1411
Query: 75 CPSHCGIRGNEAVDQAAKD 93
PSHC GN+ D+ AK+
Sbjct: 1412 IPSHCNNPGNDTADRLAKE 1430
>gi|395758876|gb|AFN70532.1| pol protein, partial [Human immunodeficiency virus 1]
Length = 1003
Score = 37.7 bits (86), Expect = 0.89, Method: Composition-based stats.
Identities = 32/87 (36%), Positives = 43/87 (49%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AILL L+ +V+DS +L I A P S ++ QI
Sbjct: 628 TNQKTELHAILLALQD----SGSEVNIVTDSQYALGIIQAQPDKSESKLVDQIIE----- 678
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
K +G+ V L W P+H GI GNE VD+
Sbjct: 679 KLIGKDKVYLSWVPAHKGIGGNEQVDK 705
>gi|339507621|gb|AEJ81222.1| pol protein [Human immunodeficiency virus 1]
Length = 656
Score = 37.7 bits (86), Expect = 0.89, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 45/87 (51%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N AEL AI L L+ + +V+DS +L I A+P S ++SQI
Sbjct: 569 TNQKAELQAIYLALQD----SGLEVNIVTDSQYALGIIQAHPDKSESELVSQIIE----- 619
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + V L W P+H GI GNE VD+
Sbjct: 620 QLINKEKVYLAWVPAHKGIGGNEQVDK 646
>gi|242811714|ref|XP_002485806.1| hypothetical protein TSTA_098250 [Talaromyces stipitatus ATCC
10500]
gi|218714145|gb|EED13568.1| hypothetical protein TSTA_098250 [Talaromyces stipitatus ATCC
10500]
Length = 275
Score = 37.7 bits (86), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 29 FLLVSDSMGSLSAIANPYLSCPIISQIYSAWCDLKTVGQYYVKLMWCPSHCGIRGNEAVD 88
FL +++ L + P ++ + + A L + GQ V + W P H G+ GNE D
Sbjct: 34 FLDAQNAIDRLKST-RPGPGQALVLRAHRAAEKLASRGQP-VTIQWVPGHSGVEGNEQAD 91
Query: 89 QAAK 92
QAAK
Sbjct: 92 QAAK 95
>gi|39930159|emb|CAE46399.1| pol protein [Simian immunodeficiency virus]
Length = 1004
Score = 37.7 bits (86), Expect = 0.89, Method: Composition-based stats.
Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAIA-NPYLS-CPIISQIYSAWCDL 62
+N AELI +L+ L+ N + +V+DS +L IA P S I+ QI A
Sbjct: 628 TNQKAELIGVLMALQDSPN----KVNIVTDSQYALGIIAGTPTTSEHQIVEQIIQA---- 679
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
G+ + + W P+H GI GN +D+
Sbjct: 680 -MQGKEEIYITWVPAHKGIGGNTEIDK 705
>gi|342867783|gb|EGU72563.1| hypothetical protein FOXB_16927 [Fusarium oxysporum Fo5176]
Length = 1790
Score = 37.7 bits (86), Expect = 0.90, Method: Composition-based stats.
Identities = 23/72 (31%), Positives = 40/72 (55%), Gaps = 11/72 (15%)
Query: 28 RFLLVSDSMGSLSAIANP------YLSCPIISQIYSAWCDLKTVGQYYVKLMWCPSHCGI 81
+ ++ +D+ ++ ++A P YL I +I + L+ G V++ W P+H GI
Sbjct: 1553 KVMIYTDNQAAIRSVARPRGKSGSYLLQDITQRIQT----LRAQG-LPVEVRWIPAHKGI 1607
Query: 82 RGNEAVDQAAKD 93
GNEA D+AAK+
Sbjct: 1608 YGNEAADRAAKE 1619
>gi|260533625|gb|ACX45035.1| pol protein [Human immunodeficiency virus 1]
Length = 1003
Score = 37.7 bits (86), Expect = 0.94, Method: Composition-based stats.
Identities = 32/87 (36%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N AEL AI L L+ +V+DS +L I A P S +++QI
Sbjct: 628 TNQKAELHAIYLALQD----SGSEVNIVTDSQYALGIIQAQPDKSDSELVNQIIE----- 678
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
K +G+ V L W P+H GI GNE VD+
Sbjct: 679 KLIGKDKVYLSWVPAHKGIGGNEQVDK 705
>gi|327458241|gb|AEA76560.1| pol protein [Human immunodeficiency virus 1]
Length = 560
Score = 37.7 bits (86), Expect = 0.94, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AILL L+ + +V+DS +L I A P S ++SQI
Sbjct: 473 TNQKTELQAILLALQD----SGLEVNIVTDSQYALGIIQAQPDKSESEVVSQIIE----- 523
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + V L W P+H GI GNE VD+
Sbjct: 524 ELIKKEKVYLAWVPAHKGIGGNEQVDK 550
>gi|327458239|gb|AEA76559.1| pol protein [Human immunodeficiency virus 1]
Length = 560
Score = 37.7 bits (86), Expect = 0.94, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AILL L+ + +V+DS +L I A P S ++SQI
Sbjct: 473 TNQKTELQAILLALQD----SGLEVNIVTDSQYALGIIQAQPDKSESEVVSQIIE----- 523
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + V L W P+H GI GNE VD+
Sbjct: 524 ELIKKEKVYLAWVPAHKGIGGNEQVDK 550
>gi|327458229|gb|AEA76554.1| pol protein [Human immunodeficiency virus 1]
Length = 560
Score = 37.7 bits (86), Expect = 0.94, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AILL L+ + +V+DS +L I A P S ++SQI
Sbjct: 473 TNQKTELQAILLALQD----AGLEVNIVTDSQYALGIIQAQPDKSESELVSQIIE----- 523
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + V L W P+H GI GNE VD+
Sbjct: 524 QLINKEKVYLSWVPAHKGIGGNEQVDK 550
>gi|327458227|gb|AEA76553.1| pol protein [Human immunodeficiency virus 1]
Length = 560
Score = 37.7 bits (86), Expect = 0.94, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AILL L+ + +V+DS +L I A P S ++SQI
Sbjct: 473 TNQKTELQAILLALQD----AGLEVNIVTDSQYALGIIQAQPDKSESELVSQIIE----- 523
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + V L W P+H GI GNE VD+
Sbjct: 524 QLINKEKVYLSWVPAHKGIGGNEQVDK 550
>gi|256011258|gb|ACU55485.1| pol protein [Human immunodeficiency virus 1]
Length = 1011
Score = 37.7 bits (86), Expect = 0.94, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AILL L+ + +V+DS +L I A P S ++SQI
Sbjct: 636 TNQKTELQAILLALQD----SGLEVNIVTDSQYALGIIQAQPDKSESEVVSQIIE----- 686
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + V L W P+H GI GNE VD+
Sbjct: 687 ELIKKEKVYLAWVPAHKGIGGNEQVDK 713
>gi|22596485|gb|AAN03248.1|AF457081_2 pol protein [Human immunodeficiency virus 1]
Length = 1003
Score = 37.7 bits (86), Expect = 0.94, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AILL L+ +V+DS +L I A P S +++QI
Sbjct: 628 TNQKTELHAILLALQD----SGSEVNIVTDSQYALGIIQAQPDRSESELVNQIIE----- 678
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
K +G+ + L W P+H GI GNE VD+
Sbjct: 679 KLIGKDKIYLSWVPAHKGIGGNEQVDK 705
>gi|341571930|gb|AEK79603.1| pol polyprotein [Simian immunodeficiency virus]
Length = 998
Score = 37.7 bits (86), Expect = 0.97, Method: Composition-based stats.
Identities = 31/88 (35%), Positives = 43/88 (48%), Gaps = 13/88 (14%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDS---MGSLSAIANPYLSCPIISQIYSAWCD 61
+N AEL A+ L L+ + +V+DS MG L + + S PI+ QI
Sbjct: 619 TNQQAELWAVDLALKD----SGAQVNIVTDSQYVMGVLQGLPDQSDS-PIVEQIIQ---- 669
Query: 62 LKTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
K + V L W P+H GI GNE VD+
Sbjct: 670 -KLTNKAAVYLSWVPAHRGIGGNEEVDK 696
>gi|242824216|ref|XP_002488214.1| hypothetical protein TSTA_005900 [Talaromyces stipitatus ATCC
10500]
gi|218713135|gb|EED12560.1| hypothetical protein TSTA_005900 [Talaromyces stipitatus ATCC
10500]
Length = 252
Score = 37.7 bits (86), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 29 FLLVSDSMGSLSAIANPYLSCPIISQIYSAWCDLKTVGQYYVKLMWCPSHCGIRGNEAVD 88
FL +++ L + + P ++ + + A L GQ V + W P H GI GNE D
Sbjct: 24 FLDAQNAIDRLKS-SRPGPGQALVLRAHRAVEKLAMRGQL-VTIQWVPGHSGIEGNEQAD 81
Query: 89 QAAK 92
QAAK
Sbjct: 82 QAAK 85
>gi|427791585|gb|JAA61244.1| Putative tick transposon, partial [Rhipicephalus pulchellus]
Length = 1099
Score = 37.4 bits (85), Expect = 0.99, Method: Composition-based stats.
Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
Query: 18 LRSIKNHPAMRFLLVSDSMGSLSAIANPYLSCPIISQIYSAWCDLKTVGQYYVKLMWCPS 77
LR +KN A R +++SD ++ ++ + Q ++ D G + W PS
Sbjct: 881 LRKLKNGFAQRAVIISDCKSAMQQLSRGTPTNNFCRQSLASLKDATKKGXN-ITFQWIPS 939
Query: 78 HCGIRGNEAVDQAAKDPL 95
H G+ GNE D A + L
Sbjct: 940 HVGVSGNERADALANEAL 957
>gi|307176190|gb|EFN65847.1| hypothetical protein EAG_02388 [Camponotus floridanus]
Length = 220
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 42/100 (42%), Gaps = 15/100 (15%)
Query: 5 SNGIAELIAILLCLR------SIKNHPAMRFLLVSDSMGSLSAIANPYLSCPIISQIYSA 58
S AE AI L S K + ++ SD G L A+ N LS I A
Sbjct: 1 STFTAEAFAIRTALEILQGSYSKKEYNHENVIIFSDCQGVLKALKNNKLSVYHNRYIMEA 60
Query: 59 ----WCDLKTVGQYYVK--LMWCPSHCGIRGNEAVDQAAK 92
W K V Q+ +K L+W PSH G GNE D AK
Sbjct: 61 RELYW---KIVTQFRIKIYLIWIPSHKGFIGNEIADILAK 97
>gi|391379595|gb|AFM44236.1| pol protein, partial [Human immunodeficiency virus 1]
Length = 1003
Score = 37.4 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AILL L+ + +V+DS +L I A P S ++SQI
Sbjct: 628 TNQKTELQAILLALQD----SGLEVNIVTDSQYALGIIQAQPDRSESELVSQIIE----- 678
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + V L W P+H GI GNE VD+
Sbjct: 679 QLIKKEKVYLAWVPAHKGIGGNEQVDK 705
>gi|289469906|gb|ADC96608.1| pol protein [Human immunodeficiency virus 1]
Length = 848
Score = 37.4 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AILL L+ + +V+DS +L I A P S ++SQI
Sbjct: 473 TNQKTELQAILLALQD----SGLEVNIVTDSQYALGIIQAQPDRSESELVSQIIE----- 523
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + V L W P+H GI GNE VD+
Sbjct: 524 QLIKKEKVYLAWVPAHKGIGGNEQVDK 550
>gi|148745897|emb|CAK49337.1| gag-pol fusion polyprotein precursor [Human immunodeficiency virus
1]
Length = 964
Score = 37.4 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AILL L+ +V+DS +L I A P S +++QI
Sbjct: 628 TNQKTELHAILLALQD----SGSEVNIVTDSQYALGIIQAQPDKSESELVNQIIE----- 678
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
K +G+ + L W P+H GI GNE VD+
Sbjct: 679 KLIGKDKIYLSWVPAHKGIGGNEQVDK 705
>gi|49574272|gb|AAT66807.1| reverse transcriptase [Human immunodeficiency virus 1]
Length = 560
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 35/100 (35%), Positives = 49/100 (49%), Gaps = 16/100 (16%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AI L L+ + +V+DS +L I A P S ++SQI
Sbjct: 473 TNQKTELQAIHLALQD----SGLEVNIVTDSQYALGIIQAQPDKSESELVSQIIE----- 523
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQAAKDPLLSPVIEK 102
+ + + V L W P+H GI GNE VD+ L+SP I K
Sbjct: 524 QLIKKEKVYLTWVPAHKGIGGNEQVDK-----LVSPGIRK 558
>gi|25166931|gb|AAN73709.1|AF484508_1 gag-pol fusion polyprotein [Human immunodeficiency virus 1]
Length = 1436
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 32/87 (36%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N AEL AI L L+ +V+DS +L I A P S +++QI
Sbjct: 1061 TNQKAELHAIYLALQD----SGSEVNVVTDSQYALGIIQAQPDRSESELVNQIIE----- 1111
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
K +G+ V L W P+H GI GNE VD+
Sbjct: 1112 KLIGKDKVYLSWVPAHKGIGGNEQVDK 1138
>gi|212674625|gb|ACJ37051.1| pol protein [Human immunodeficiency virus 1]
Length = 1003
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N AEL AI L L+ +V+DS +L I A P S +++QI
Sbjct: 628 TNQKAELQAIYLALQD----SGSEVNIVTDSQYALGIIQAQPDRSESELVNQIIE----- 678
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
K +G+ + L W P+H GI GNE VD+
Sbjct: 679 KLIGKDKIYLSWVPAHKGIGGNEQVDK 705
>gi|256011614|gb|ACU55663.1| pol protein [Human immunodeficiency virus 1]
Length = 1003
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AILL L+ + +V+DS +L I A P S ++SQI
Sbjct: 628 TNQKTELQAILLALQD----SGLEVNIVTDSQYALGIIQAQPDKSESELVSQIIE----- 678
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + V L W P+H GI GNE VD+
Sbjct: 679 QLIQKEKVYLTWVPAHKGIGGNEQVDK 705
>gi|391379271|gb|AFM43946.1| pol protein, partial [Human immunodeficiency virus 1]
Length = 1003
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AILL L+ + +V+DS +L I A P S ++SQI
Sbjct: 628 TNQKTELQAILLALQD----SGLEVNIVTDSQYALGIIQAQPDKSESELVSQIIE----- 678
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + V L W P+H GI GNE VD+
Sbjct: 679 QLIKKEKVYLAWVPAHKGIGGNEQVDK 705
>gi|373249009|dbj|BAL46015.1| pol protein, partial [Human immunodeficiency virus 1]
Length = 1003
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AILL L+ + +V+DS +L I A P S ++SQI
Sbjct: 628 TNQKTELQAILLALQD----SGLEVNIVTDSQYALGIIQAQPDKSESELVSQIIE----- 678
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + V L W P+H GI GNE VD+
Sbjct: 679 QLIKKEKVYLAWVPAHKGIGGNEQVDK 705
>gi|371940413|dbj|BAL45629.1| pol protein, partial [Human immunodeficiency virus 1]
Length = 1003
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AILL L+ + +V+DS +L I A P S ++SQI
Sbjct: 628 TNQKTELQAILLALQD----SGLEVNIVTDSQYALGIIQAQPDKSESELVSQIIE----- 678
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + V L W P+H GI GNE VD+
Sbjct: 679 QLIKKEKVYLAWVPAHKGIGGNEQVDK 705
>gi|339507407|gb|AEJ81115.1| pol protein [Human immunodeficiency virus 1]
Length = 656
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AILL L+ + +V+DS +L I A P S ++SQI
Sbjct: 569 TNQKTELQAILLALQD----SGLEVNIVTDSQYALGIIQAQPDKSESELVSQIIE----- 619
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + V L W P+H GI GNE VD+
Sbjct: 620 QLIKKEKVYLAWVPAHKGIGGNEQVDK 646
>gi|339507403|gb|AEJ81113.1| pol protein [Human immunodeficiency virus 1]
Length = 656
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AILL L+ + +V+DS +L I A P S ++SQI
Sbjct: 569 TNQKTELQAILLALQD----SGLEVNIVTDSQYALGIIQAQPDKSESELVSQIIE----- 619
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + V L W P+H GI GNE VD+
Sbjct: 620 QLIKKEKVYLAWVPAHKGIGGNEQVDK 646
>gi|339507254|gb|AEJ81039.1| pol protein [Human immunodeficiency virus 1]
Length = 656
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AILL L+ + +V+DS +L I A P S ++SQI
Sbjct: 569 TNQKTELQAILLALQD----SGLEVNIVTDSQYALGIIQAQPDKSESELVSQIIE----- 619
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + V L W P+H GI GNE VD+
Sbjct: 620 QLIKKEKVYLAWVPAHKGIGGNEQVDK 646
>gi|339507228|gb|AEJ81026.1| pol protein [Human immunodeficiency virus 1]
Length = 626
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AILL L+ + +V+DS +L I A P S ++SQI
Sbjct: 539 TNQKTELQAILLALQD----SGLEVNIVTDSQYALGIIQAQPDKSESELVSQIIE----- 589
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + V L W P+H GI GNE VD+
Sbjct: 590 QLIKKEKVYLAWVPAHKGIGGNEQVDK 616
>gi|306477793|gb|ADM89271.1| pol protein [Human immunodeficiency virus 1]
Length = 848
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AILL L+ + +V+DS +L I A P S ++SQI
Sbjct: 473 TNQKTELQAILLALQD----SGLEVNIVTDSQYALGIIQAQPDKSESEVVSQIIE----- 523
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + V L W P+H GI GNE VD+
Sbjct: 524 QLIKKDKVYLAWVPAHKGIGGNEQVDK 550
>gi|306477791|gb|ADM89270.1| pol protein [Human immunodeficiency virus 1]
Length = 848
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AILL L+ + +V+DS +L I A P S ++SQI
Sbjct: 473 TNQKTELQAILLALQD----SGLEVNIVTDSQYALGIIQAQPDKSESEVVSQIIE----- 523
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + V L W P+H GI GNE VD+
Sbjct: 524 QLIKKDKVYLAWVPAHKGIGGNEQVDK 550
>gi|306477789|gb|ADM89269.1| pol protein [Human immunodeficiency virus 1]
Length = 848
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AILL L+ + +V+DS +L I A P S ++SQI
Sbjct: 473 TNQKTELQAILLALQD----SGLEVNIVTDSQYALGIIQAQPDKSESEVVSQIIE----- 523
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + V L W P+H GI GNE VD+
Sbjct: 524 QLIKKDKVYLAWVPAHKGIGGNEQVDK 550
>gi|306477787|gb|ADM89268.1| pol protein [Human immunodeficiency virus 1]
Length = 848
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AILL L+ + +V+DS +L I A P S ++SQI
Sbjct: 473 TNQKTELQAILLALQD----SGLEVNIVTDSQYALGIIQAQPDKSESEVVSQIIE----- 523
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + V L W P+H GI GNE VD+
Sbjct: 524 QLIKKDKVYLAWVPAHKGIGGNEQVDK 550
>gi|306477785|gb|ADM89267.1| pol protein [Human immunodeficiency virus 1]
Length = 848
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AILL L+ + +V+DS +L I A P S ++SQI
Sbjct: 473 TNQKTELQAILLALQD----SGLEVNIVTDSQYALGIIQAQPDKSESEVVSQIIE----- 523
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + V L W P+H GI GNE VD+
Sbjct: 524 QLIKKDKVYLAWVPAHKGIGGNEQVDK 550
>gi|306477779|gb|ADM89264.1| pol protein [Human immunodeficiency virus 1]
gi|306477781|gb|ADM89265.1| pol protein [Human immunodeficiency virus 1]
gi|306477783|gb|ADM89266.1| pol protein [Human immunodeficiency virus 1]
Length = 848
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AILL L+ + +V+DS +L I A P S ++SQI
Sbjct: 473 TNQKTELQAILLALQD----SGLEVNIVTDSQYALGIIQAQPDKSESEVVSQIIE----- 523
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + V L W P+H GI GNE VD+
Sbjct: 524 QLIKKDKVYLAWVPAHKGIGGNEQVDK 550
>gi|256011700|gb|ACU55706.1| pol protein [Human immunodeficiency virus 1]
Length = 1003
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AILL L+ + +V+DS +L I A P S ++SQI
Sbjct: 628 TNQKTELQAILLALQD----SGLEVNIVTDSQYALGIIQAQPDKSESELVSQIIE----- 678
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + V L W P+H GI GNE VD+
Sbjct: 679 QLIKKEKVYLAWVPAHKGIGGNEQVDK 705
>gi|164415872|gb|AAU14940.2| pol protein [Human immunodeficiency virus 1]
Length = 999
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AILL L+ + +V+DS +L I A P S ++SQI
Sbjct: 624 TNQKTELQAILLALQD----SGLEVNIVTDSQYALGIIQAQPDKSESELVSQIIE----- 674
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + V L W P+H GI GNE VD+
Sbjct: 675 QLIKKEKVYLAWVPAHKGIGGNEQVDK 701
>gi|37221508|gb|AAQ89882.1| pol protein [Human immunodeficiency virus 1]
Length = 657
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AILL L+ + +V+DS +L I A P S ++SQI
Sbjct: 572 TNQKTELQAILLALQD----SGLEVNIVTDSQYALGIIQAQPDKSESELVSQIIE----- 622
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + V L W P+H GI GNE VD+
Sbjct: 623 QLIKKEKVYLAWVPAHKGIGGNEQVDK 649
>gi|242826135|ref|XP_002488580.1| reverse transcriptase, putative [Talaromyces stipitatus ATCC 10500]
gi|218712398|gb|EED11824.1| reverse transcriptase, putative [Talaromyces stipitatus ATCC 10500]
Length = 1154
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 31 LVSDSMGSLSAIANPYLSC--PIISQIYSAWCDLKTVGQYYVKLMWCPSHCGIRGNEAVD 88
++SDSM +L AI+N II + + +LK G ++L W P H GNEA D
Sbjct: 919 ILSDSMSALQAISNARNKSGQRIIQAVRQSARELKARG-IPLRLQWVPGHYSDLGNEAAD 977
Query: 89 QAAKD 93
+ AK+
Sbjct: 978 RLAKE 982
>gi|122913067|gb|ABM68063.1| pol protein [Human immunodeficiency virus 1]
Length = 947
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 32/91 (35%), Positives = 46/91 (50%), Gaps = 11/91 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N AEL AI L L+ ++ +V+DS +L I A P S ++SQI
Sbjct: 572 TNQKAELQAIQLALQDSESEVN----IVTDSQYALGIIQAQPDKSESELVSQIIE----- 622
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQAAKD 93
+ + + V L W P+H GI GNE VD+ D
Sbjct: 623 QLIQKEMVYLSWVPAHKGIGGNEQVDKLVSD 653
>gi|148745853|emb|CAK49315.1| gag-pol fusion polyprotein precursor [Human immunodeficiency virus
1]
Length = 964
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 33/87 (37%), Positives = 46/87 (52%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AI L L+ + P + +V+DS +L I A P S I++QI
Sbjct: 628 TNQKTELHAINLALQD--SGPEVN--IVTDSQYALGIIQAQPDRSESEIVNQIIE----- 678
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
K +G+ V L W P+H GI GNE VD+
Sbjct: 679 KLIGKERVYLSWVPAHKGIGGNEQVDK 705
>gi|451844832|gb|EMD58169.1| hypothetical protein COCSADRAFT_71043, partial [Cochliobolus
sativus ND90Pr]
Length = 80
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/24 (62%), Positives = 17/24 (70%)
Query: 70 VKLMWCPSHCGIRGNEAVDQAAKD 93
V W P+H GI GNEA DQAAK+
Sbjct: 57 VTTRWIPAHVGIPGNEAADQAAKE 80
>gi|222428588|gb|ACM50200.1| pol protein [Human immunodeficiency virus 1]
Length = 1006
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 32/87 (36%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AI L L+ + M +V+DS +L I A P S I+SQI
Sbjct: 631 TNQKTELQAISLALQDSE----MEVNIVTDSQYALGIIQAQPDKSESEIVSQIIE----- 681
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + V L W P+H GI GNE VD+
Sbjct: 682 QLINKERVYLAWVPAHKGIGGNEQVDK 708
>gi|306478231|gb|ADM89490.1| pol protein [Human immunodeficiency virus 1]
Length = 757
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 31/89 (34%), Positives = 45/89 (50%), Gaps = 11/89 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AILL L+ + +V+DS +L I A P S +++QI
Sbjct: 382 TNQKTELQAILLALQD----SGLEVNIVTDSQYALGIIQAQPDKSESELVNQIIE----- 432
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQAA 91
+ + + V L W P+H GI GNE VD+ A
Sbjct: 433 QLINKERVYLSWVPAHKGIGGNEQVDKLA 461
>gi|284192167|gb|ADB82803.1| pol protein [Simian immunodeficiency virus]
Length = 743
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 32/87 (36%), Positives = 45/87 (51%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N AEL AI L L+ R +V+DS +L + A+P S PI+ +I
Sbjct: 484 TNQKAELEAIKLALQD----SGPRVNIVTDSQYALGILTASPDQSDNPIVREIIEL---- 535
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+G+ V L W P+H GI GNE VD+
Sbjct: 536 -MIGKEGVYLGWVPAHKGIGGNEQVDK 561
>gi|242808962|ref|XP_002485270.1| hypothetical protein TSTA_047630 [Talaromyces stipitatus ATCC
10500]
gi|218715895|gb|EED15317.1| hypothetical protein TSTA_047630 [Talaromyces stipitatus ATCC
10500]
Length = 134
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 34 DSMGSLSAIANPYLSCP-IISQIYSAWCDLKTVGQYYVKLMWCPSHCGIRGNEAVDQAAK 92
DS ++ AI + I+ I W +L++ G V + W +H GI+GNE D AAK
Sbjct: 6 DSQATIQAINGAQKTGQQILGSIAEKWDELRSQG-VQVTIHWILAHQGIKGNERADIAAK 64
Query: 93 DP 94
+
Sbjct: 65 EA 66
>gi|6358700|gb|AAF07325.1|AF188115_2 Pol protein [Simian immunodeficiency virus]
Length = 1023
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAIANPYLSC--PIISQIYSAWCDL 62
+N AEL A+LL L+ K+ R +V+DS + ++ P++ QI +
Sbjct: 649 TNQQAELEAVLLALKDSKS----RVNIVTDSQYVMKVLSQRPTETEHPVVKQIIE---EC 701
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
K Q Y L W P+H GI GN+ VD
Sbjct: 702 KKKDQVY--LGWVPAHKGIGGNQEVDH 726
>gi|403413368|emb|CCM00068.1| predicted protein [Fibroporia radiculosa]
Length = 526
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 29/98 (29%), Positives = 50/98 (51%), Gaps = 6/98 (6%)
Query: 4 CSNGIAELIAILLCLRS-IKNHP--AMRFLLVSDSMGSLSAIANPYLSCPIISQIYSAWC 60
C+ AE++A+ + S + + P +L D+ G+LS I N + + I +A
Sbjct: 139 CTIFDAEMMALARGIHSALHDAPQNCTHLVLCVDNAGALSKILNCEMGPSQLVSILAAEK 198
Query: 61 DLKTVG---QYYVKLMWCPSHCGIRGNEAVDQAAKDPL 95
+K + Q+++ L+W PSH + NE VD+ AK L
Sbjct: 199 VMKFLQRSEQHHISLLWVPSHKDVPPNEFVDELAKSAL 236
>gi|427779633|gb|JAA55268.1| Putative tick transposon [Rhipicephalus pulchellus]
Length = 534
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 10/74 (13%)
Query: 25 PAMRFLLVSDSMGSLSAIANPYLSCPIISQIYSAWCDLKTV------GQYYVKLMWCPSH 78
P + + SDS +L I +P+ P + D++ + Q+ + W P H
Sbjct: 300 PGHXWSIFSDSKAALQCIMSPFRRGPNEQLV----ADIRILHHRAVEKQHNIVYQWIPGH 355
Query: 79 CGIRGNEAVDQAAK 92
CGI GN+ D+AA+
Sbjct: 356 CGIYGNDRADEAAR 369
>gi|29367081|gb|AAO22475.1| pol protein [Simian immunodeficiency virus]
Length = 1011
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 30/88 (34%), Positives = 44/88 (50%), Gaps = 13/88 (14%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDS---MGSLSAIANPYLSCPIISQIYSAWCD 61
+N AEL AI + L+ R +V+DS +G LSA A PI+ +I
Sbjct: 641 TNQKAELTAIKMALQD----SGPRVNIVTDSQYALGILSA-APDQSDNPIVREIIEL--- 692
Query: 62 LKTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+G+ + L W P+H GI GNE +D+
Sbjct: 693 --MIGKEEIYLSWVPAHKGIGGNEQIDK 718
>gi|407867272|gb|EKG08535.1| hypothetical protein TCSYLVIO_000316, partial [Trypanosoma cruzi]
Length = 187
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 41/95 (43%), Gaps = 7/95 (7%)
Query: 9 AELIAILLCLRSIK----NHPAMRFLLVSDSMGSLSAIANPYLSCP--IISQIYSAWCDL 62
E A+LL L + H L+V+DS L+A+ LS QI+ L
Sbjct: 65 TESRALLLALEKLMIPRIRHRRKTMLVVTDSQSLLAALNKGPLSQTDWTEDQIWQRLLTL 124
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQAAKDPLLS 97
G + V L +C HCG+ NE DQ A + S
Sbjct: 125 TRAG-WSVHLQFCYGHCGVHANEPADQYATQTMES 158
>gi|71794614|emb|CAI28854.1| gag-pol fusion polyprotein precursor [Human immunodeficiency virus 1]
Length = 1434
Score = 37.4 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 43/87 (49%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AI L L+ +V+DS +L I A P S I++QI
Sbjct: 1059 TNQKTELYAIFLALQD----SGSEVNIVTDSQYALGIIQAQPDRSESEIVNQIIE----- 1109
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ +G+ V L W P+H GI GNE VD+
Sbjct: 1110 QLIGKDKVYLSWVPAHKGIGGNEQVDK 1136
>gi|13569319|gb|AAK31054.1|AF286234_2 truncated pol polyprotein [Human immunodeficiency virus 1]
Length = 816
Score = 37.0 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N AEL AI L L+ + + +DS +L I A P S ++SQI
Sbjct: 631 TNQKAELQAIQLALQD----SGSKVNIATDSQYALGIIQAQPDKSESELVSQIIE----- 681
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ +G+ V L W P+H GI GNE VD+
Sbjct: 682 QLIGKERVYLSWVPAHKGIGGNEQVDK 708
>gi|358376777|dbj|GAA93294.1| reverse transcriptase [Aspergillus kawachii IFO 4308]
Length = 255
Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
Query: 31 LVSDSMGSLSAIANPYLSC--PIISQIYSAWCDLKTVGQYYVKLMWCPSHCGIRGNEAVD 88
++SDSM +L AI N II I A ++ G ++L W P HC GN+ D
Sbjct: 129 ILSDSMSALQAIRNSANKSGQRIIRAILQAASEMIARG-IPIRLHWVPGHCNDPGNDEPD 187
Query: 89 QAAKD 93
+ AK+
Sbjct: 188 RLAKE 192
>gi|427798873|gb|JAA64888.1| Putative tick transposon, partial [Rhipicephalus pulchellus]
Length = 1158
Score = 37.0 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 30/93 (32%), Positives = 42/93 (45%), Gaps = 6/93 (6%)
Query: 8 IAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAIANPYLSCPIISQIYSAWCDLKTVGQ 67
+AE +A++L LR + +V+DS+ SA L P S I L
Sbjct: 965 LAEFLAVILALRKLP-FSITSVAIVTDSLSLCSA-----LITPTESHILRLLRLLVPHHL 1018
Query: 68 YYVKLMWCPSHCGIRGNEAVDQAAKDPLLSPVI 100
++L+W P H GI NE D AK L PV+
Sbjct: 1019 RNLRLIWVPGHRGIVLNEVADTLAKASLAGPVL 1051
>gi|25166971|gb|AAN73745.1|AF484512_1 truncated gag-pol fusion polyprotein [Human immunodeficiency virus 1]
Length = 1148
Score = 37.0 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 32/87 (36%), Positives = 43/87 (49%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AI L L+ +V+DS +L I A P S I++QI
Sbjct: 1060 TNQKTELHAIYLALQD----SGSEVNIVTDSQYALGIIQAQPDRSESEIVNQIIE----- 1110
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
K +G+ V L W P+H GI GNE VD+
Sbjct: 1111 KLIGKDKVYLSWVPAHKGIGGNEQVDK 1137
>gi|386642408|emb|CCD41789.1| pol protein, partial [Simian immunodeficiency virus]
Length = 657
Score = 37.0 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 32/91 (35%), Positives = 47/91 (51%), Gaps = 19/91 (20%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSM---GSLSA---IANPYLSCPIISQIYSA 58
+N AEL A+LL L+ + P + +++DS G L A ++ L II+Q+
Sbjct: 393 TNQKAELEAVLLALKD--SGPKVN--IITDSQYVYGILEAQPEFSDSQLVTEIINQL--- 445
Query: 59 WCDLKTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
VG+ V L W P+H GI GNE VD+
Sbjct: 446 ------VGKEAVYLSWVPAHKGIGGNEEVDK 470
>gi|22596233|gb|AAN03025.1|AF457052_2 pol protein [Human immunodeficiency virus 1]
Length = 1003
Score = 37.0 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 32/87 (36%), Positives = 43/87 (49%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AI L L+ +V+DS +L I A P S I++QI
Sbjct: 628 TNQKTELHAIYLALQD----SGSEVNIVTDSQYALGIIQAQPDRSESEIVNQIIE----- 678
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
K +G+ V L W P+H GI GNE VD+
Sbjct: 679 KLIGKDKVYLSWVPAHKGIGGNEQVDK 705
>gi|426198364|gb|EKV48290.1| hypothetical protein AGABI2DRAFT_58493, partial [Agaricus bisporus
var. bisporus H97]
Length = 401
Score = 37.0 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 17/38 (44%), Positives = 22/38 (57%)
Query: 66 GQYYVKLMWCPSHCGIRGNEAVDQAAKDPLLSPVIEKK 103
G +KL W +H G++GNE VD AAK+ EKK
Sbjct: 202 GTVEIKLEWISAHSGVQGNEEVDTAAKEAAEGKSSEKK 239
>gi|13095191|gb|AAK12174.1| pol polyprotein [Human immunodeficiency virus 1]
Length = 562
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 30/82 (36%), Positives = 42/82 (51%), Gaps = 11/82 (13%)
Query: 10 ELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDLKTVGQ 67
EL AI L L+ P + +V+DS +L I A P S ++SQI + + +
Sbjct: 480 ELQAIHLALQD----PGLEVNIVTDSQYALGIIQAQPDQSESELVSQIIE-----QLIKK 530
Query: 68 YYVKLMWCPSHCGIRGNEAVDQ 89
V L W P+H GI GNE VD+
Sbjct: 531 EKVYLAWVPAHKGIGGNEQVDK 552
>gi|727181|gb|AAA64258.1| pol [Simian immunodeficiency virus]
Length = 1049
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 30/89 (33%), Positives = 45/89 (50%), Gaps = 15/89 (16%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDS---MGSLSAIANPYLS-CPIISQIYSAWC 60
+N AEL+AI + L + +V+DS MG L+A P S P++ QI +
Sbjct: 660 TNQQAELVAIKMALED----SGEKVNIVTDSQYAMGILTA--QPTQSDSPLVEQIIAL-- 711
Query: 61 DLKTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
V + + L W P+H GI GNE +D+
Sbjct: 712 ---MVKKRAIYLQWVPAHKGIGGNEEIDK 737
>gi|319444194|gb|ADV58205.1| pol protein [Human immunodeficiency virus 1]
Length = 1006
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 32/87 (36%), Positives = 43/87 (49%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AILL L+ +V+DS +L I A P S I+SQI
Sbjct: 631 TNQKTELQAILLALQD----SGSEVNIVTDSQYALGIIQAQPDKSESEIVSQIIE----- 681
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + V L W P+H GI GNE VD+
Sbjct: 682 QLIKKEKVYLTWVPAHKGIGGNEQVDK 708
>gi|256010803|gb|ACU55258.1| pol protein [Human immunodeficiency virus 1]
Length = 1008
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AILL L+ + +V+DS +L I A P S ++SQI
Sbjct: 633 TNQKTELQAILLALQD----SGAKVNIVTDSQYALGIIQAQPDKSESELVSQIIE----- 683
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + V L W P+H GI GNE VD+
Sbjct: 684 QLIKKEKVYLAWVPAHKGIGGNEQVDK 710
>gi|331222567|ref|XP_003323957.1| hypothetical protein PGTG_05859 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 288
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 41/96 (42%), Gaps = 8/96 (8%)
Query: 5 SNGIAELIAILLCLRSIKN-------HPAMRFLLVSDSMGSLSAIANPYLSCPIISQIYS 57
SN ELI I L + +N + D+ G+L ++P P
Sbjct: 78 SNFETELIGIGLAITIAQNALEADHSQEISAVAIFGDNQGALMLSSDPLSQSPGQHLYTD 137
Query: 58 AWCDLKTVGQYYVKLMWCPSHCGIRGNEAVDQAAKD 93
+ +K +G VKL WCPSH GI NE D AK+
Sbjct: 138 NFFRMKLLG-CPVKLYWCPSHEGIIANEKADTLAKE 172
>gi|443691275|gb|ELT93184.1| hypothetical protein CAPTEDRAFT_223991 [Capitella teleta]
Length = 391
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 14/32 (43%), Positives = 20/32 (62%)
Query: 70 VKLMWCPSHCGIRGNEAVDQAAKDPLLSPVIE 101
V +WCPS+ GI G+E D+ K L+ PV +
Sbjct: 275 VVFLWCPSYVGILGDEVADRLTKQALVMPVTD 306
>gi|47118211|gb|AAT11202.1| pol protein [Human immunodeficiency virus 1]
Length = 947
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AILL L+ + +V+DS +L I A P S I++QI
Sbjct: 572 TNQKTELQAILLALQD----SGLEVNIVTDSQYALGIIQAQPDKSESEIVNQIIE----- 622
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + V L W P+H GI GNE VD+
Sbjct: 623 QLIKKEKVYLAWVPAHKGIGGNEQVDK 649
>gi|47118221|gb|AAT11211.1| pol protein [Human immunodeficiency virus 1]
Length = 947
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AILL L+ + +V+DS +L I A P S I++QI
Sbjct: 572 TNQKTELQAILLALQD----SGLEVNIVTDSQYALGIIQAQPDKSESEIVNQIIE----- 622
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + V L W P+H GI GNE VD+
Sbjct: 623 QLIKKEKVYLAWVPAHKGIGGNEQVDK 649
>gi|427781821|gb|JAA56362.1| Putative tick transposon [Rhipicephalus pulchellus]
Length = 1134
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 30/93 (32%), Positives = 42/93 (45%), Gaps = 6/93 (6%)
Query: 8 IAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAIANPYLSCPIISQIYSAWCDLKTVGQ 67
+AE +A++L LR + +V+DS+ SA L P S I L
Sbjct: 885 LAEFLAVILALRKLP-FSITSVAIVTDSLSLCSA-----LITPTESHILRLLRLLVPHHL 938
Query: 68 YYVKLMWCPSHCGIRGNEAVDQAAKDPLLSPVI 100
++L+W P H GI NE D AK L PV+
Sbjct: 939 RNLRLIWVPGHRGIVLNEVADTLAKASLAGPVL 971
>gi|256011404|gb|ACU55558.1| pol protein [Human immunodeficiency virus 1]
Length = 1003
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AILL L+ + +V+DS +L I A P S ++SQI
Sbjct: 628 TNQKTELQAILLALQD----AGLEVNIVTDSQYALGIIQAQPDKSESELVSQIIE----- 678
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + V L W P+H GI GNE VD+
Sbjct: 679 ZLIXKEKVYLSWVPAHKGIGGNEQVDK 705
>gi|242814698|ref|XP_002486420.1| reverse transcriptase, putative [Talaromyces stipitatus ATCC 10500]
gi|218714759|gb|EED14182.1| reverse transcriptase, putative [Talaromyces stipitatus ATCC 10500]
Length = 874
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 4/87 (4%)
Query: 9 AELIAILLCLR-SIKNHPAMRFLLVSDSMGSLSAI--ANPYLSCPIISQIYSAWCDLKTV 65
AEL+ + L+ +++ P ++ D+ ++ + P ++ + + A L
Sbjct: 588 AELVGVATALKWALERQPLGPIWVLLDAQNAIDRLRSTRPGPGQALVLRAHKAAEKLALR 647
Query: 66 GQYYVKLMWCPSHCGIRGNEAVDQAAK 92
GQ V + W P H GI GNE DQAAK
Sbjct: 648 GQP-VTIQWVPGHSGIEGNEQADQAAK 673
>gi|38491870|gb|AAR22240.1| pol protein [Human immunodeficiency virus 1]
Length = 1003
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 32/87 (36%), Positives = 43/87 (49%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N AEL AI L LR +V+DS SL I A P S +++QI
Sbjct: 628 TNQKAELHAIQLALRD----SGSEVNIVTDSQYSLGIIQAQPDRSDSELVNQIIE----- 678
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
K + + V L W P+H GI GNE +D+
Sbjct: 679 KLIEKEKVYLSWVPAHKGIGGNEQIDK 705
>gi|226347281|gb|ACO50051.1| pol protein [Human immunodeficiency virus 1]
Length = 1003
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 32/87 (36%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N AEL AI L L+ +V+DS +L I A P S +++QI
Sbjct: 628 TNQKAELHAIHLALQD----SGSEVNIVTDSQYALGIIQAQPDRSESELVNQIIE----- 678
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
K +G+ V L W P+H GI GNE VD+
Sbjct: 679 KLIGKDKVYLSWVPAHKGIGGNEQVDK 705
>gi|158967408|gb|ABW86751.1| pol protein [Human immunodeficiency virus 1]
Length = 1003
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 32/87 (36%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N AEL AI L L+ +V+DS +L I A P S +++QI
Sbjct: 628 TNQKAELHAIHLALQD----SGSEVNIVTDSQYALGIIQAQPDRSESELVNQIIE----- 678
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
K +G+ V L W P+H GI GNE VD+
Sbjct: 679 KLIGKDKVYLSWVPAHKGIGGNEQVDK 705
>gi|2290213|gb|AAB65093.1| Lian-Aa1 retrotransposon protein [Aedes aegypti]
Length = 1189
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 25/93 (26%), Positives = 46/93 (49%), Gaps = 4/93 (4%)
Query: 3 HCSNGIAELIAILLCLRSIKNHPAMRFLL--VSDSMGSLSAIANPYLSCPIISQIYSAWC 60
+C+ AE+ A++ ++S M ++ SDS ++ A+A+ ++ +
Sbjct: 946 NCTVFQAEIFALMCGVQSALQQRVMGKVIYFCSDSQAAIKALASANSRSKLVIACRTQIE 1005
Query: 61 DLKTVGQYYVKLMWCPSHCGIRGNEAVDQAAKD 93
+L +V V L+W P H I GNE D+ A+D
Sbjct: 1006 ELNSVNS--VNLVWVPGHSSIAGNELADELARD 1036
>gi|328834255|gb|AEB52685.1| pol protein, partial [Human immunodeficiency virus 1]
Length = 1004
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 32/87 (36%), Positives = 43/87 (49%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AI L L+ +V+DS +L I A P S I++QI
Sbjct: 629 TNQKTELHAIYLALQD----SGSEVNIVTDSQYALGIIQAQPDKSESEIVNQIIE----- 679
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
K +G+ V L W P+H GI GNE VD+
Sbjct: 680 KLIGKDKVYLSWVPAHKGIGGNEQVDK 706
>gi|391379561|gb|AFM44206.1| pol protein, partial [Human immunodeficiency virus 1]
Length = 1003
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AILL L+ + +V+DS +L I A P S ++SQI
Sbjct: 628 TNQKTELHAILLALQD----SGLEVNIVTDSQYALGIIQAQPDKSESELVSQIIE----- 678
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + V L W P+H GI GNE VD+
Sbjct: 679 ELIKKEKVYLAWVPAHKGIGGNEQVDK 705
>gi|222428266|gb|ACM49943.1| pol protein [Human immunodeficiency virus 1]
Length = 1003
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AILL L+ + +V+DS +L I A P S ++SQI
Sbjct: 628 TNQKTELHAILLALQD----SGLEVNIVTDSQYALGIIQAQPDKSESELVSQIIE----- 678
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + V L W P+H GI GNE VD+
Sbjct: 679 ELIKKEKVYLAWVPAHKGIGGNEQVDK 705
>gi|289187203|gb|ADC92181.1| pol protein [Human immunodeficiency virus 1]
Length = 659
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N AEL AI L L+ + +V+DS +L I A P S I+SQI
Sbjct: 572 TNQKAELQAIYLALQD----SGVEVNIVTDSQYALGIIQAQPDKSESEIVSQIIE----- 622
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + V L W P+H GI GNE +D+
Sbjct: 623 QLIKKEKVYLAWVPAHKGIGGNEQIDK 649
>gi|262199557|ref|YP_003270766.1| ribonuclease H [Haliangium ochraceum DSM 14365]
gi|262082904|gb|ACY18873.1| ribonuclease H [Haliangium ochraceum DSM 14365]
Length = 215
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 46/98 (46%), Gaps = 8/98 (8%)
Query: 1 MFHCSNGIAELIAILLCLRSIKNHPAMRFLLVSDS---MGSLSAIANPYLSCPIISQIYS 57
+ +N IAEL+AI L ++ A + ++ SDS +G LS P + ++ +I +
Sbjct: 119 LGEGTNNIAELVAIERALEAVAPEDARQVVVHSDSSYAIGLLSKGWKPKANVELVGRIRA 178
Query: 58 AWCDLKTVGQYYVKLMWCPSHCGIRGNEAVDQAAKDPL 95
T ++ + H GI NE D+ A+D +
Sbjct: 179 L-----TAAVRRLRFVKVKGHAGIPENERCDELARDAI 211
>gi|392872128|gb|AFM85330.1| pol polyprotein, partial [Simian immunodeficiency virus]
Length = 1006
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 30/88 (34%), Positives = 45/88 (51%), Gaps = 13/88 (14%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDS---MGSLSAIANPYLSCPIISQIYSAWCD 61
+N AEL AILL L+ K + +V+DS +G L + S P++ +I
Sbjct: 631 TNQQAELQAILLALKDAKE----KVNIVTDSQYVLGILQGTPDQSDS-PLVEEIIQ---- 681
Query: 62 LKTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + V L W P+H GI GNE VD+
Sbjct: 682 -ELMNKEAVYLNWVPAHKGIGGNEEVDK 708
>gi|358376045|dbj|GAA92616.1| reverse transcriptase [Aspergillus kawachii IFO 4308]
Length = 861
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 31/97 (31%), Positives = 42/97 (43%), Gaps = 13/97 (13%)
Query: 9 AELIAILLCL----------RSIKNHPAMRFLLVSDSMGSLSAIANPYLSC--PIISQIY 56
AELI IL + R A ++SDS +L AI P II I
Sbjct: 594 AELIGILYAINLINRIVLQQRRAGQKRARTVTILSDSTSALLAIQKPGSKSGQQIIYAIL 653
Query: 57 SAWCDLKTVGQYYVKLMWCPSHCGIRGNEAVDQAAKD 93
A + +T G ++L W P H I GN+ D+ AK+
Sbjct: 654 QAAKNTRTHG-VTIRLQWVPGHSEILGNDTADRLAKE 689
>gi|322782100|gb|EFZ10335.1| hypothetical protein SINV_09428 [Solenopsis invicta]
Length = 225
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 13/24 (54%), Positives = 17/24 (70%)
Query: 70 VKLMWCPSHCGIRGNEAVDQAAKD 93
V L+W P+H GI GNE D+ AK+
Sbjct: 6 VTLVWIPAHVGIAGNEKADETAKE 29
>gi|341571665|gb|AEK79466.1| pol protein [Human immunodeficiency virus 1]
Length = 1003
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 32/91 (35%), Positives = 46/91 (50%), Gaps = 11/91 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AI + LR + P + +V+DS +L I A P S ++SQI
Sbjct: 628 TNQKTELQAIYIALRD--SGPEVN--IVTDSQYALGIIQAQPDKSESELVSQIIE----- 678
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQAAKD 93
+ + + V L W P+H GI GNE VD+ D
Sbjct: 679 ELIKKEKVYLAWVPAHKGIGGNEQVDKLVSD 709
>gi|328834312|gb|AEB52735.1| pol protein, partial [Human immunodeficiency virus 1]
Length = 1003
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 30/87 (34%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AI L L+ ++ +V+DS +L I A P S ++SQI
Sbjct: 628 TNQKTELQAIYLALQD----SGLKVNIVTDSQYALGIIQAQPDKSESELVSQIVE----- 678
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + V L W P+H GI GNE VD+
Sbjct: 679 QLINKEQVYLAWVPAHKGIGGNEQVDK 705
>gi|427780325|gb|JAA55614.1| Putative tick transposon [Rhipicephalus pulchellus]
Length = 652
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 4/87 (4%)
Query: 10 ELIAILLCLRSIKNHPAM-RFLLVSDSMGSLSAIANPYLSCPIISQIYSAWCDLKTVGQY 68
E+++I+ L S + P++ + L SDS ++ I N L + ++ A L+ +
Sbjct: 423 EVLSIVHALESFSSLPSVPEYTLFSDSYAAIRHIQNRTLPHSLEQEVERAVSALQPSTVF 482
Query: 69 YVKLMWCPSHCGIRGNEAVDQAAKDPL 95
L W P H GI GNE + A+D L
Sbjct: 483 ---LRWVPGHSGIDGNELAHRLARDIL 506
>gi|331242530|ref|XP_003333911.1| hypothetical protein PGTG_15334 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 475
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 29/95 (30%), Positives = 45/95 (47%), Gaps = 11/95 (11%)
Query: 5 SNGIAELIAILLCL---RSIKNHPAMR-FLLVSDSMGSLSAIANPYLSCP---IISQIYS 57
SN EL+ I L L R + R +L++DS ++ + P L ++SQI
Sbjct: 317 SNFECELVGIRLGLEMGRVLTTEAGFRQIVLLTDSQAAIERMRRPGLPKSGQYLLSQIQE 376
Query: 58 AWCDLKTVGQY-YVKLMWCPSHCGIRGNEAVDQAA 91
A + + + Y+ + WCP H GI GN+ D A
Sbjct: 377 A---AEMIPPFVYITVRWCPGHVGIAGNKLADAKA 408
>gi|37221526|gb|AAQ89891.1| pol protein [Human immunodeficiency virus 1]
Length = 657
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 30/87 (34%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AI+L L+ + +V+DS +L I A P S ++SQI
Sbjct: 572 TNQKTELQAIILALQD----SGLEVNIVTDSQYALGIIQAQPDKSESELVSQIIE----- 622
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + V L W P+H GI GNE VD+
Sbjct: 623 QLINKERVYLAWVPAHKGIGGNEQVDK 649
>gi|409181591|gb|AFV26814.1| pol protein, partial [Human immunodeficiency virus 1]
Length = 1006
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 32/87 (36%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AI L L+ ++ +V+DS +L I A P S I+SQI
Sbjct: 631 TNQKTELHAIYLALQDSRSEVN----IVTDSQYALGIIHAQPDRSESEIVSQIIE----- 681
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
K + + V L W P+H GI GNE VD+
Sbjct: 682 KLIEKEKVYLSWVPAHKGIGGNEQVDK 708
>gi|328880022|emb|CBY88596.1| Gag-pol polyprotein precursor [Simian immunodeficiency virus]
Length = 1443
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 7/87 (8%)
Query: 3 HCSNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAIANPYLSCPIISQIYSAWCDL 62
H +N AELIAI L L K+ + +V+DS +L ++ S++ +L
Sbjct: 1077 HTTNQQAELIAIKLALEDSKS----KVNIVTDSQYALRLLSKRPTETD--SELVKEIIEL 1130
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
G+ V L W P+H GI GN+ +DQ
Sbjct: 1131 -IKGKDEVYLSWVPAHKGIGGNQEIDQ 1156
>gi|386642402|emb|CCD41786.1| pol protein, partial [Simian immunodeficiency virus]
Length = 518
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 32/91 (35%), Positives = 47/91 (51%), Gaps = 19/91 (20%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSM---GSLSA---IANPYLSCPIISQIYSA 58
+N AEL A+LL L+ + P + +V+DS G L A ++ L II+Q+
Sbjct: 399 TNQKAELEAVLLALKD--SGPKVN--IVTDSQYVYGILDAQPEFSDSKLVTEIINQL--- 451
Query: 59 WCDLKTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+G+ V L W P+H GI GNE VD+
Sbjct: 452 ------IGKEAVYLSWVPAHKGIGGNEEVDK 476
>gi|427791855|gb|JAA61379.1| Putative tick transposon, partial [Rhipicephalus pulchellus]
Length = 891
Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 4/87 (4%)
Query: 10 ELIAILLCLRSIKNHPAM-RFLLVSDSMGSLSAIANPYLSCPIISQIYSAWCDLKTVGQY 68
E+++I+ L S + P++ + L SDS ++ I N L + ++ A L+ +
Sbjct: 705 EVLSIVHALESFSSLPSVPEYTLFSDSYAAIRHIQNRTLPHSLEQEVERAVSALQPSTVF 764
Query: 69 YVKLMWCPSHCGIRGNEAVDQAAKDPL 95
L W P H GI GNE + A+D L
Sbjct: 765 ---LRWVPGHSGIDGNELAHRLARDIL 788
>gi|308198439|pdb|3AA2|A Chain A, A52i E. Coli Rnase Hi
Length = 155
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 27/114 (23%), Positives = 49/114 (42%), Gaps = 24/114 (21%)
Query: 4 CSNGIAELIAILLCLRSIKNHPAMRFLLVSDSM----------------GSLSAIANPYL 47
+N EL+AI++ L ++K H +L +DS G +A P
Sbjct: 42 TTNNRMELMAIIVALEALKEH--CEVILSTDSQYVRQGITQWIHNWKKRGWKTADKKPVK 99
Query: 48 SCPIISQIYSAWCDLKTVGQYYVKLMWCPSHCGIRGNEAVDQAAKDPLLSPVIE 101
+ + ++ +A +GQ+ +K W H G NE D+ A+ ++P +E
Sbjct: 100 NVDLWQRLDAA------LGQHQIKWEWVKGHAGHPENERCDELARAAAMNPTLE 147
>gi|295314174|gb|ADF97424.1| pol protein, partial [Human immunodeficiency virus 1]
Length = 1007
Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N AEL AI L L+ + +V+DS +L I A P S ++SQI
Sbjct: 632 TNQKAELQAIWLALQD----SGLEVNIVTDSQYALGIIQAQPDKSESELVSQIIE----- 682
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + V L W P+H GI GNE VD+
Sbjct: 683 QLIKKEKVYLTWVPAHKGIGGNEQVDK 709
>gi|22596505|gb|AAN03266.1|AF457083_2 pol protein [Human immunodeficiency virus 1]
Length = 1002
Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 43/87 (49%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AI L L+ +V+DS +L I A P S +++QI
Sbjct: 627 TNQKTELYAIYLALQD----SGSEVNIVTDSQYALGIIQAQPDRSESELVNQIIE----- 677
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
K +G+ V L W P+H GI GNE VD+
Sbjct: 678 KLIGKDKVYLSWVPAHKGIGGNEQVDK 704
>gi|33331456|gb|AAQ10902.1| pol protein [Human immunodeficiency virus 1]
Length = 1003
Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 33/87 (37%), Positives = 46/87 (52%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AI L L+ + P + +V+DS +L I A P S I++QI
Sbjct: 628 TNQKTELHAINLALQD--SGPEVN--IVTDSQYALGIIQAQPDRSESEIVNQIIE----- 678
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
K +G+ V L W P+H GI GNE VD+
Sbjct: 679 KLIGKDKVYLSWVPAHKGIGGNEQVDK 705
>gi|407227208|emb|CCA61251.1| Pol polyprotein, partial [Human immunodeficiency virus 1]
Length = 952
Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 33/87 (37%), Positives = 46/87 (52%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N AEL AI L L+ K P + +V+DS +L I A P S I++QI
Sbjct: 627 TNQKAELQAIQLALQDSK--PEVN--IVTDSQYALGIIQAQPDRSESEIVNQIIE----- 677
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + V L W P+H GI GNE VD+
Sbjct: 678 QLIKKEKVYLSWVPAHKGIGGNEQVDK 704
>gi|22596263|gb|AAN03052.1|AF457055_2 pol protein [Human immunodeficiency virus 1]
Length = 1003
Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 32/87 (36%), Positives = 43/87 (49%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AI L L+ +V+DS +L I A P S I++QI
Sbjct: 628 TNQKTELYAIDLALQD----SGSEVNIVTDSQYALGIIQAQPDRSESEIVNQIIE----- 678
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
K +G+ V L W P+H GI GNE VD+
Sbjct: 679 KLIGKDKVYLSWVPAHKGIGGNEQVDK 705
>gi|331215471|ref|XP_003320416.1| hypothetical protein PGTG_01328 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 205
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Query: 34 DSMGSLSAIANPYLSCPI---ISQIYSAWCDLKTVGQYYVKLMWCPSHCGIRGNEAVDQA 90
D+ +L+ I+ P S + ++I++ + + ++L WCP+H GI N+ VD
Sbjct: 84 DNQATLTTISKPPKSTSLQFRFNKIFTLLKFISSNSTTPIQLFWCPAHVGIPENKKVDSL 143
Query: 91 AKD 93
AK+
Sbjct: 144 AKE 146
>gi|429854941|gb|ELA29922.1| hypothetical protein CGGC5_1108 [Colletotrichum gloeosporioides
Nara gc5]
Length = 336
Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 29/93 (31%), Positives = 44/93 (47%), Gaps = 10/93 (10%)
Query: 8 IAELIAILLCLRSI----KNHPAMR----FLLVSDSMGSLSAIANPYLSCPIISQIYSAW 59
+AEL A+ L L + + P +R F D++ SL A+ P++ + +A
Sbjct: 107 VAELYALALGLETALYLSRAVPDLRQVNIFTDCKDAIRSLMR-ADASDDDPLVQRAVAAS 165
Query: 60 CDLKTVGQYYVKLMWCPSHCGIRGNEAVDQAAK 92
L+ G + WCP H G+ GNE DQ AK
Sbjct: 166 AKLEAKG-VRTAVRWCPGHVGVEGNERADQLAK 197
>gi|301503536|gb|ADK75268.1| pol protein [Human immunodeficiency virus 1]
Length = 1008
Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 43/87 (49%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AI L L+ + +V+DS +L I A P S I+SQI
Sbjct: 633 TNQKTELQAIYLALQD----SGLEVNIVTDSQYALGIIQAQPDKSESEIVSQIIE----- 683
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + V L W P+H GI GNE VD+
Sbjct: 684 QLINKEKVYLAWVPAHKGIGGNEQVDK 710
>gi|301503533|gb|ADK75266.1| pol protein [Human immunodeficiency virus 1]
Length = 947
Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 43/87 (49%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AI L L+ + +V+DS +L I A P S I+SQI
Sbjct: 572 TNQKTELQAIYLALQD----SGLEVNIVTDSQYALGIIQAQPDKSESEIVSQIIE----- 622
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + V L W P+H GI GNE VD+
Sbjct: 623 QLINKEKVYLAWVPAHKGIGGNEQVDK 649
>gi|255984016|gb|ACU46080.1| pol protein [Human immunodeficiency virus 1]
Length = 659
Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 30/87 (34%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AILL L+ + +V+DS +L I A P S ++SQI
Sbjct: 572 TNQKTELQAILLALQD----SGLEVNIVTDSQYALGIIQAQPDKSESELVSQIIE----- 622
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + + L W P+H GI GNE VD+
Sbjct: 623 QLIXKEKIYLAWVPAHKGIGGNEQVDK 649
>gi|170778877|gb|ACB36838.1| reverse transcriptase [Human immunodeficiency virus 1]
Length = 560
Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 43/87 (49%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AI L L+ + +V+DS +L I A P S I+SQI
Sbjct: 473 TNQKTELQAIYLALQD----SGLEVNIVTDSQYALGIIQAQPDKSESEIVSQIIE----- 523
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + V L W P+H GI GNE VD+
Sbjct: 524 QLINKEKVYLAWVPAHKGIGGNEQVDK 550
>gi|157004996|gb|ABV00705.1| pol protein [Human immunodeficiency virus 1]
Length = 1003
Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AILL L+ + +V+DS +L I A P S ++SQI
Sbjct: 628 TNQKTELQAILLALQD----SGVEVNIVTDSQYALGIIQAQPDKSESELVSQIIE----- 678
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + V L W P+H GI GNE VD+
Sbjct: 679 QLIKKEKVYLAWVPAHKGIGGNEQVDK 705
>gi|60544778|gb|AAX22724.1| pol protein [Human immunodeficiency virus 1]
Length = 1003
Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 31/86 (36%), Positives = 43/86 (50%), Gaps = 11/86 (12%)
Query: 6 NGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDLK 63
N EL AILL L+ + +V+DS +L I A P S ++SQI +
Sbjct: 629 NQKTELQAILLALQD----SGLEVNIVTDSQYALGIIQAQPDKSESELVSQIIE-----Q 679
Query: 64 TVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + V L W P+H GI GNE VD+
Sbjct: 680 LIKKEKVYLAWVPAHKGIGGNEQVDK 705
>gi|259122682|gb|ACV92647.1| pol protein [Human immunodeficiency virus 1]
Length = 1001
Score = 37.0 bits (84), Expect = 1.7, Method: Composition-based stats.
Identities = 33/87 (37%), Positives = 43/87 (49%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AI L L+ +V+DS +L I A P S I++QI
Sbjct: 626 TNQKTELHAIHLALQD----SGSEVNIVTDSQYALGIIQAQPDKSESEIVNQIIE----- 676
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
K VG+ V L W P+H GI GNE VD+
Sbjct: 677 KLVGKDKVYLSWVPAHKGIGGNEQVDK 703
>gi|306478015|gb|ADM89382.1| pol protein [Human immunodeficiency virus 1]
Length = 848
Score = 37.0 bits (84), Expect = 1.7, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AILL L+ + +V+DS +L I A P S ++SQI
Sbjct: 473 TNQQTELQAILLALQD----SGVEVNIVTDSQYALGIIQAQPDKSESELVSQIIE----- 523
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + V L W P+H GI GNE VD+
Sbjct: 524 QLIKKEKVYLAWVPAHKGIGGNEQVDK 550
>gi|306478013|gb|ADM89381.1| pol protein [Human immunodeficiency virus 1]
Length = 848
Score = 37.0 bits (84), Expect = 1.7, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AILL L+ + +V+DS +L I A P S ++SQI
Sbjct: 473 TNQQTELQAILLALQD----SGVEVNIVTDSQYALGIIQAQPDKSESELVSQIIE----- 523
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + V L W P+H GI GNE VD+
Sbjct: 524 QLIKKEKVYLAWVPAHKGIGGNEQVDK 550
>gi|195409346|gb|ACF95922.1| pol protein [Human immunodeficiency virus 1]
Length = 1002
Score = 36.6 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 30/87 (34%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N AEL AI L L+ +V+DS +L I A P S +++QI
Sbjct: 627 TNQKAELHAIYLALQ----ESGSEVNIVTDSQYALGIIQAQPDRSESELVNQIIE----- 677
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
K +G+ + L W P+H GI GNE +D+
Sbjct: 678 KLIGKDKIYLSWVPAHKGIGGNEQIDK 704
>gi|407854714|gb|EKG06670.1| hypothetical protein TCSYLVIO_002219, partial [Trypanosoma cruzi]
Length = 275
Score = 36.6 bits (83), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 43/101 (42%), Gaps = 7/101 (6%)
Query: 9 AELIAILLCLRSIK----NHPAMRFLLVSDSMGSLSAIANPYLSCP--IISQIYSAWCDL 62
E A+LL L + H L+V+DS L+A+ LS Q++ L
Sbjct: 113 TESRALLLALEKLSVHRIRHRRKTLLVVTDSQSLLAALNKGPLSQTDWTEDQMWQRLLTL 172
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQAAKDPLLSPVIEKK 103
G + V L +C HCG+ NE DQ A + S +K
Sbjct: 173 TCAG-WSVHLQFCYGHCGVHANELADQHATQTMESGQYTEK 212
>gi|255984032|gb|ACU46088.1| pol protein [Human immunodeficiency virus 1]
Length = 659
Score = 36.6 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 30/87 (34%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AILL L+ + +V+DS +L I A P S ++SQI
Sbjct: 572 TNQKTELQAILLALQD----SGLEVNIVTDSQYALGIIQAQPDKSESELVSQIIE----- 622
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + + L W P+H GI GNE VD+
Sbjct: 623 QLIQKEKIYLAWVPAHKGIGGNEQVDK 649
>gi|37682520|gb|AAQ98208.1| pol protein [Human immunodeficiency virus 1]
Length = 1003
Score = 36.6 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 32/87 (36%), Positives = 43/87 (49%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AI L L+ +V+DS +L I A P S I++QI
Sbjct: 628 TNQKTELHAICLALQD----SGSEVNIVTDSQYALGIIQAQPDKSELEIVNQIIE----- 678
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
K +G+ V L W P+H GI GNE VD+
Sbjct: 679 KLIGKDKVYLSWVPAHKGIGGNEQVDK 705
>gi|6635955|gb|AAF20019.1|AF134900_2 pol-like protein [Aedes aegypti]
Length = 1208
Score = 36.6 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 29/89 (32%), Positives = 37/89 (41%), Gaps = 10/89 (11%)
Query: 3 HCSNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAIANPYLSCPIISQIYSAWCDL 62
CS AE AILL + P ++SDS L+ I + P I +
Sbjct: 983 QCSVFSAEAAAILLASTTPAPKP---ICVISDSASVLATINSSSTRHPWIQAVQKN-SPS 1038
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQAA 91
+TV +W P HCGIRGN D A
Sbjct: 1039 QTV------FLWVPGHCGIRGNVEADHLA 1061
>gi|16118351|gb|AAL12719.1| pol protein [Human immunodeficiency virus 1]
Length = 1003
Score = 36.6 bits (83), Expect = 1.8, Method: Composition-based stats.
Identities = 30/87 (34%), Positives = 45/87 (51%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AILL L+ ++ +V+DS +L I A P S +++QI
Sbjct: 628 TNQKTELQAILLALQD----SGLKVNIVTDSQYALGIIQAQPDKSESELVNQIIE----- 678
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + V L W P+H GI GNE VD+
Sbjct: 679 QLIKKEKVYLSWVPAHKGIGGNEQVDK 705
>gi|339507623|gb|AEJ81223.1| pol protein [Human immunodeficiency virus 1]
Length = 656
Score = 36.6 bits (83), Expect = 1.8, Method: Composition-based stats.
Identities = 31/91 (34%), Positives = 44/91 (48%), Gaps = 11/91 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AI L L+ + +V+DS +L I A P S ++SQI
Sbjct: 569 TNQKTELQAIHLALQD----SGLEVNIVTDSQYALGIIQAQPDKSESEVVSQIIE----- 619
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQAAKD 93
+ + + V L W P+H GI GNE VD+ D
Sbjct: 620 QLIKKEKVYLAWVPAHKGIGGNEKVDKLVSD 650
>gi|427791063|gb|JAA60983.1| Putative tick transposon, partial [Rhipicephalus pulchellus]
Length = 1035
Score = 36.6 bits (83), Expect = 1.8, Method: Composition-based stats.
Identities = 23/84 (27%), Positives = 42/84 (50%), Gaps = 2/84 (2%)
Query: 9 AELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAIAN-PYLSCPIISQIYSAWCDLKTVGQ 67
AE AI + ++ I+ ++ +DS+ + A+ P+++ +YS C + + Q
Sbjct: 833 AEAYAIFVAVKHIEQLKLPSAVIYTDSLSVVKALKTLKKHKNPVLASLYSLLCTVYALKQ 892
Query: 68 YYVKLMWCPSHCGIRGNEAVDQAA 91
+ V + W P H I+GN DQ A
Sbjct: 893 HVV-VCWVPGHREIQGNVLADQLA 915
>gi|304347449|gb|ADM25287.1| pol protein [Human immunodeficiency virus 1]
Length = 560
Score = 36.6 bits (83), Expect = 1.8, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 43/87 (49%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AILL L + +V+DS +L I A P S ++SQI
Sbjct: 473 TNQKTELQAILLALXD----SGLEVNIVTDSQYALGIIQAQPDKSESELVSQIIE----- 523
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + V L W P+H GI GNE VD+
Sbjct: 524 QLIKKEKVYLTWVPAHKGIGGNEQVDK 550
>gi|256011304|gb|ACU55508.1| pol protein [Human immunodeficiency virus 1]
Length = 1011
Score = 36.6 bits (83), Expect = 1.8, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 43/87 (49%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AILL L+ + +V+DS +L I A P S +SQI
Sbjct: 636 TNQKTELQAILLALQD----SGLEVNIVTDSQYALGIIQAQPDKSESEXVSQIIE----- 686
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + V L W P+H GI GNE VD+
Sbjct: 687 QLINKEKVYLAWVPAHKGIGGNEQVDK 713
>gi|344311732|gb|AEN04388.1| pol protein, partial [Human immunodeficiency virus 1]
Length = 562
Score = 36.6 bits (83), Expect = 1.8, Method: Composition-based stats.
Identities = 29/87 (33%), Positives = 47/87 (54%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N AEL AILL L+ + ++ +V+DS +L I A P S +++QI
Sbjct: 473 TNQKAELQAILLALQDSE----VKVNIVTDSQYALGIIQAQPDKSESELVNQIIE----- 523
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + + + W P+H GI GNE VD+
Sbjct: 524 QLINKERIYMSWVPAHKGIGGNEQVDK 550
>gi|256010949|gb|ACU55331.1| pol protein [Human immunodeficiency virus 1]
Length = 1003
Score = 36.6 bits (83), Expect = 1.8, Method: Composition-based stats.
Identities = 30/87 (34%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AI L L+ + +V+DS +L I A P +S I++QI
Sbjct: 628 TNQKTELQAIYLALQD----SGLEVNIVTDSQYALGIIQAQPDISESEIVNQIIE----- 678
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + V L W P+H GI GNE VD+
Sbjct: 679 QLIKKEKVYLAWVPAHKGIGGNEQVDK 705
>gi|36365489|gb|AAQ86699.1| pol protein [Human immunodeficiency virus 1]
Length = 1003
Score = 36.6 bits (83), Expect = 1.8, Method: Composition-based stats.
Identities = 30/87 (34%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AILL L+ + +V+DS +L I A P S I++QI
Sbjct: 628 TNQKTELQAILLALQD----SGLEVNIVTDSQYALGIIQAQPDRSESEIVNQIIE----- 678
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + + L W P+H GI GNE VD+
Sbjct: 679 QLIKKEKIYLAWVPAHKGIGGNEQVDK 705
>gi|36365480|gb|AAQ86691.1| pol protein [Human immunodeficiency virus 1]
Length = 1003
Score = 36.6 bits (83), Expect = 1.8, Method: Composition-based stats.
Identities = 30/87 (34%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AILL L+ + +V+DS +L I A P S I++QI
Sbjct: 628 TNQKTELQAILLALQD----SGLEVNIVTDSQYALGIIQAQPDRSESEIVNQIIE----- 678
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + + L W P+H GI GNE VD+
Sbjct: 679 QLIKKEKIYLAWVPAHKGIGGNEQVDK 705
>gi|36365534|gb|AAQ86739.1| pol protein [Human immunodeficiency virus 1]
Length = 1003
Score = 36.6 bits (83), Expect = 1.8, Method: Composition-based stats.
Identities = 30/87 (34%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AILL L+ + +V+DS +L I A P S I++QI
Sbjct: 628 TNQKTELQAILLALQD----SGLEVNIVTDSQYALGIIQAQPDRSESEIVNQIIE----- 678
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + + L W P+H GI GNE VD+
Sbjct: 679 QLIKKEKIYLAWVPAHKGIGGNEQVDK 705
>gi|36365525|gb|AAQ86731.1| pol protein [Human immunodeficiency virus 1]
Length = 1003
Score = 36.6 bits (83), Expect = 1.8, Method: Composition-based stats.
Identities = 30/87 (34%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AILL L+ + +V+DS +L I A P S I++QI
Sbjct: 628 TNQKTELQAILLALQD----SGLEVNIVTDSQYALGIIQAQPDRSESEIVNQIIE----- 678
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + + L W P+H GI GNE VD+
Sbjct: 679 QLIKKEKIYLAWVPAHKGIGGNEQVDK 705
>gi|49574445|gb|AAT66888.1| reverse transcriptase [Human immunodeficiency virus 1]
Length = 560
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N AEL AI L L+ + +V+DS +L I A P S ++SQI
Sbjct: 473 TNQKAELQAIHLALQD----SGLEVNIVTDSQYALGIIQAQPDKSESEVVSQIME----- 523
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + V L W P+H GI GNE VD+
Sbjct: 524 ELIKKEKVYLAWVPAHKGIGGNEQVDK 550
>gi|157274033|gb|ABV28302.1| pol protein [Human immunodeficiency virus 1]
Length = 1003
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N AEL AI L L+ + +V+DS +L I A P S I++QI
Sbjct: 628 TNQKAELQAIQLALQD----SGLEVNIVTDSQYALGVIQAQPDRSESEIVNQIIE----- 678
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + V L W P+H GI GNE VD+
Sbjct: 679 QLIKKERVYLSWVPAHKGIGGNEQVDK 705
>gi|22596223|gb|AAN03016.1|AF457051_2 pol protein [Human immunodeficiency virus 1]
Length = 1002
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 30/87 (34%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AI L L+ + +V+DS +L I A P S +++QI
Sbjct: 627 TNQRTELHAIYLALQD----SGLEVNIVTDSQYALGIIQAQPDRSESELVNQIIE----- 677
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ +G+ V L W P+H GI GNE VD+
Sbjct: 678 QLIGKKRVYLSWVPAHKGIGGNEQVDK 704
>gi|339507525|gb|AEJ81174.1| pol protein [Human immunodeficiency virus 1]
Length = 656
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AILL L+ +V+DS +L I A+P S ++SQI
Sbjct: 569 TNQKTELQAILLALQD----SGSEVNIVTDSQYALGIIQAHPDKSESEVVSQIIE----- 619
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + V L W P+H GI GNE VD+
Sbjct: 620 QLIKKEKVYLAWVPAHKGIGGNEKVDK 646
>gi|154276646|ref|XP_001539168.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150414241|gb|EDN09606.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 1913
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 28/99 (28%), Positives = 50/99 (50%), Gaps = 11/99 (11%)
Query: 9 AELIAILLCLRSIKNHPAM-----RFLLVSDSMGSLSAIANPYLSCP--IISQIYSAWCD 61
AEL ++L L+ + + A + + +D+ ++ A+ NP S I+ +
Sbjct: 1651 AELKGLVLALQMVIDIHATGTAPGKCAIFTDNQAAVQAVRNPKHSSGQYILVEAIQVLDR 1710
Query: 62 LKTVGQYYVKLMWCPSHCGIRGNEAVDQAAK---DPLLS 97
L+ +G + V+ W P+H G+ GNE D+ AK DP L+
Sbjct: 1711 LRDLG-WEVQFHWIPAHVGVPGNEEADRLAKRAADPTLN 1748
>gi|441469187|gb|AGC37076.1| pol protein, partial [Human immunodeficiency virus 1]
Length = 999
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N AEL AI L L+ P + +V+DS L I A P S +++QI
Sbjct: 624 TNQKAELQAIQLALQD----PGLEVNIVTDSQYVLGIIQAQPDKSESELVNQIIE----- 674
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + + L W P+H G+ GNE VD+
Sbjct: 675 QLINKERIYLSWVPAHKGVGGNEQVDK 701
>gi|386642400|emb|CCD41785.1| pol protein, partial [Simian immunodeficiency virus]
Length = 631
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 31/91 (34%), Positives = 46/91 (50%), Gaps = 19/91 (20%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDS------MGSLSAIANPYLSCPIISQIYSA 58
+N AEL A+LL L+ + P + +V+DS +G+ + L II+Q+
Sbjct: 368 TNQKAELEAVLLALKD--SGPKVN--IVTDSQYVFGIIGAQPDTSEFKLVTEIINQL--- 420
Query: 59 WCDLKTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
VG+ V L W P+H GI GNE VD+
Sbjct: 421 ------VGKEAVYLSWVPAHKGIGGNEEVDK 445
>gi|331242414|ref|XP_003333853.1| hypothetical protein PGTG_15276 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 313
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Query: 31 LVSDSMGSLSAIANPYLSCPIISQIYSAWCDLKTVGQYYVKLMWCPSHCGIRGNEAVDQA 90
+ SD+ G+L ++P S + +K +G+ ++L WCP H GI NE D
Sbjct: 78 IFSDNQGALMRSSDPISLSSGQSIFTDNFFQMKLLGRP-IRLFWCPGHEGIEANEKADSL 136
Query: 91 AK 92
AK
Sbjct: 137 AK 138
>gi|339507320|gb|AEJ81072.1| pol protein [Human immunodeficiency virus 1]
Length = 656
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 32/87 (36%), Positives = 43/87 (49%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AI L L+ + +VSDS +L I A P S I+SQI
Sbjct: 569 TNQKTELQAINLALQD----SGLEVNIVSDSQYALGIIQAQPDKSESEIVSQIIE----- 619
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + V L W P+H GI GNE VD+
Sbjct: 620 QLIKKEKVYLTWVPAHKGIGGNEQVDK 646
>gi|282598080|gb|ADA83317.1| pol protein [Human immunodeficiency virus 1]
Length = 1004
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 43/87 (49%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AI L L+ +V+DS +L I A P S +++QI
Sbjct: 629 TNQKTELQAIYLALQD----SGSEVNIVTDSQYALGIIQAQPDSSESELVNQIIE----- 679
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
K +G+ V L W P+H GI GNE VD+
Sbjct: 680 KLIGKEKVYLSWVPAHKGIGGNEQVDK 706
>gi|42592292|emb|CAF29007.1| reverse transcriptase [Human immunodeficiency virus 1]
Length = 568
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 43/87 (49%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AI L L+ + +V+DS +L I A P S I+SQI
Sbjct: 457 TNQKTELQAIHLALQD----SGLEVNIVTDSQYALGIIQAQPNKSESEIVSQIIE----- 507
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + V L W P+H GI GNE VD+
Sbjct: 508 QLINKERVYLAWVPAHKGIGGNEQVDK 534
>gi|342318905|gb|EGU10861.1| Pol-like protein [Rhodotorula glutinis ATCC 204091]
Length = 2277
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 29/93 (31%), Positives = 44/93 (47%), Gaps = 12/93 (12%)
Query: 9 AELIAILLCLRSIK---NHPAMRFLLVSDSMGSLSAIANPYLSCPIISQ-----IYSAWC 60
EL ILL L++++ + P+ LL D+ +L+ +P P Q I A
Sbjct: 1950 GELQGILLALKAVQQTADAPS-HVLLSVDNTSALTHSTDP---APTPGQYLRLAIRKALE 2005
Query: 61 DLKTVGQYYVKLMWCPSHCGIRGNEAVDQAAKD 93
+L+ + L W P H G+ GNE D AAK+
Sbjct: 2006 ELERTCVSTIHLSWLPGHVGVVGNEVADLAAKE 2038
>gi|295314213|gb|ADF97458.1| pol protein, partial [Human immunodeficiency virus 1]
Length = 1003
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N AEL AI L L+ + +V+DS +L I A P S ++SQI
Sbjct: 628 TNQKAELQAIQLALQD----SGLEVNIVTDSQYALGIIQAQPDKSESELVSQIIE----- 678
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + V L W P+H GI GNE VD+
Sbjct: 679 QLIKKEKVYLAWVPAHKGIGGNEQVDK 705
>gi|295314099|gb|ADF97357.1| pol protein, partial [Human immunodeficiency virus 1]
Length = 1003
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N AEL AI L L+ + +V+DS +L I A P S ++SQI
Sbjct: 628 TNQKAELQAIQLALQD----SGLEVNIVTDSQYALGIIQAQPDKSESELVSQIIE----- 678
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + V L W P+H GI GNE VD+
Sbjct: 679 QLIKKEKVYLAWVPAHKGIGGNEQVDK 705
>gi|256011296|gb|ACU55504.1| pol protein [Human immunodeficiency virus 1]
Length = 1003
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N AEL AI L L+ + +V+DS +L I A P S ++SQI
Sbjct: 628 TNQKAELQAIQLALQD----SGLEVNIVTDSQYALGIIQAQPDKSESELVSQIIE----- 678
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + V L W P+H GI GNE VD+
Sbjct: 679 QLIKKEKVYLAWVPAHKGIGGNEQVDK 705
>gi|238734331|gb|ACR55548.1| pol protein [Human immunodeficiency virus 1]
Length = 1003
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 43/87 (49%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AI L L+ +V+DS +L I A P S +++QI
Sbjct: 628 TNQKTELHAIYLALQD----SGSEVNIVTDSQYALGVIQAQPDRSESELVNQIIE----- 678
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
K +G+ V L W P+H GI GNE VD+
Sbjct: 679 KLIGKDKVYLSWVPAHKGIGGNEQVDK 705
>gi|190411477|gb|ACE78534.1| pol protein [Human immunodeficiency virus 1]
Length = 1009
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N AEL AI L L+ + +V+DS +L I A P S ++SQI
Sbjct: 634 TNQKAELQAIQLALQD----SGLEVNIVTDSQYALGIIQAQPDKSESELVSQIIE----- 684
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + V L W P+H GI GNE VD+
Sbjct: 685 QLIKKEKVYLAWVPAHKGIGGNEQVDK 711
>gi|190411461|gb|ACE78521.1| pol protein [Human immunodeficiency virus 1]
Length = 1003
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N AEL AI L L+ + +V+DS +L I A P S ++SQI
Sbjct: 628 TNQKAELQAIQLALQD----SGLEVNIVTDSQYALGIIQAQPDKSESELVSQIIE----- 678
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + V L W P+H GI GNE VD+
Sbjct: 679 QLIKKEKVYLAWVPAHKGIGGNEQVDK 705
>gi|190411421|gb|ACE78485.1| pol protein [Human immunodeficiency virus 1]
gi|190411431|gb|ACE78494.1| pol protein [Human immunodeficiency virus 1]
gi|190411441|gb|ACE78503.1| pol protein [Human immunodeficiency virus 1]
gi|190411451|gb|ACE78512.1| pol protein [Human immunodeficiency virus 1]
Length = 1003
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N AEL AI L L+ + +V+DS +L I A P S ++SQI
Sbjct: 628 TNQKAELQAIQLALQD----SGLEVNIVTDSQYALGIIQAQPDKSESELVSQIIE----- 678
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + V L W P+H GI GNE VD+
Sbjct: 679 QLIKKEKVYLAWVPAHKGIGGNEQVDK 705
>gi|22596410|gb|AAN03182.1|AF457072_2 pol protein [Human immunodeficiency virus 1]
Length = 1005
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 30/87 (34%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AI L L+ + +V+DS +L I A P S +++QI
Sbjct: 630 TNQRTELHAIYLALQD----SGLEVNIVTDSQYALGIIQAQPDRSESELVNQIIE----- 680
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ +G+ V L W P+H GI GNE VD+
Sbjct: 681 QLIGKERVYLSWVPAHKGIGGNEQVDK 707
>gi|242786247|ref|XP_002480768.1| hypothetical protein TSTA_035600 [Talaromyces stipitatus ATCC
10500]
gi|218720915|gb|EED20334.1| hypothetical protein TSTA_035600 [Talaromyces stipitatus ATCC
10500]
Length = 278
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 33/75 (44%), Gaps = 6/75 (8%)
Query: 23 NHPAMRFLLVSDSMGSLSAI-----ANPYLSCPIISQIYSAWCDLKTVGQYYVKLMWCPS 77
H LV +G+ +AI P ++ + + A L GQ V + W P
Sbjct: 4 GHEVFDAELVGMLLGAQNAIDRLRSTRPGPGQALVLRAHRAAEKLALRGQP-VTIQWVPG 62
Query: 78 HCGIRGNEAVDQAAK 92
H GI GNE DQAAK
Sbjct: 63 HSGIEGNEQADQAAK 77
>gi|157005074|gb|ABV00775.1| pol protein [Human immunodeficiency virus 1]
Length = 1003
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AILL L+ + +V+DS +L I A P S ++SQI
Sbjct: 628 TNQKTELQAILLALQD----SGVEVNVVTDSQYALGIIQAQPDKSESELVSQIIE----- 678
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + V L W P+H GI GNE VD+
Sbjct: 679 QLIKKEKVYLAWVPAHKGIGGNEQVDK 705
>gi|157833642|pdb|1RBV|A Chain A, Structural Study Of Mutants Of Escherichia Coli
Ribonuclease Hi With Enhanced Thermostability
Length = 155
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 27/114 (23%), Positives = 49/114 (42%), Gaps = 24/114 (21%)
Query: 4 CSNGIAELIAILLCLRSIKNHPAMRFLLVSDSM----------------GSLSAIANPYL 47
+N EL+A ++ L ++K H +L +DS G +A A P
Sbjct: 42 TTNNRMELMAAIVALEALKEH--CEVILSTDSQYVRQGITQWIHNWKKRGWKTADAKPVK 99
Query: 48 SCPIISQIYSAWCDLKTVGQYYVKLMWCPSHCGIRGNEAVDQAAKDPLLSPVIE 101
+ + ++ +A +GQ+ +K W H G NE D+ A+ ++P +E
Sbjct: 100 NVDLWQRLDAA------LGQHQIKWEWVKGHAGHPENERCDELARAAAMNPTLE 147
>gi|1890639|gb|AAC57052.1| pol protein [Simian immunodeficiency virus - agm.tan-1]
Length = 1067
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 13/88 (14%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDS---MGSLSAIANPYLSCPIISQIYSAWCD 61
+N AEL A+LL L+ H + +V+DS MG L+A S +++QI
Sbjct: 695 TNQQAELQAVLLALK----HSKSKVNIVTDSQYVMGILTAQPTQSDSV-LVNQIIE---- 745
Query: 62 LKTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + + L W P+H GI GN+ +D+
Sbjct: 746 -EMINKDAIYLTWVPAHKGIGGNQEIDK 772
>gi|49574461|gb|AAT66896.1| reverse transcriptase [Human immunodeficiency virus 1]
Length = 560
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N AEL AI L L+ + +V+DS +L I A P S ++SQI
Sbjct: 473 TNQKAELQAIHLALQD----SGLEVNIVTDSQYALGIIQAQPDKSESEVVSQIIE----- 523
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + V L W P+H GI GNE VD+
Sbjct: 524 ELIKKEKVYLAWVPAHKGIGGNEQVDK 550
>gi|49574441|gb|AAT66886.1| reverse transcriptase [Human immunodeficiency virus 1]
Length = 560
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N AEL AI L L+ + +V+DS +L I A P S ++SQI
Sbjct: 473 TNQKAELQAIHLALQD----SGLEVNIVTDSQYALGIIQAQPDKSESEVVSQIIE----- 523
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + V L W P+H GI GNE VD+
Sbjct: 524 ELIKKEKVYLAWVPAHKGIGGNEQVDK 550
>gi|49574437|gb|AAT66884.1| reverse transcriptase [Human immunodeficiency virus 1]
Length = 560
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N AEL AI L L+ + +V+DS +L I A P S ++SQI
Sbjct: 473 TNQKAELQAIHLALQD----SGLEVNIVTDSQYALGIIQAQPDKSESEVVSQIIE----- 523
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + V L W P+H GI GNE VD+
Sbjct: 524 ELIKKEKVYLAWVPAHKGIGGNEQVDK 550
>gi|49574435|gb|AAT66883.1| reverse transcriptase [Human immunodeficiency virus 1]
Length = 560
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N AEL AI L L+ + +V+DS +L I A P S ++SQI
Sbjct: 473 TNQKAELQAIHLALQD----SGLEVNIVTDSQYALGIIQAQPDKSESEVVSQIIE----- 523
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + V L W P+H GI GNE VD+
Sbjct: 524 ELIKKEKVYLAWVPAHKGIGGNEQVDK 550
>gi|49574420|gb|AAT66876.1| reverse transcriptase [Human immunodeficiency virus 1]
gi|49574422|gb|AAT66877.1| reverse transcriptase [Human immunodeficiency virus 1]
Length = 560
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N AEL AI L L+ + +V+DS +L I A P S ++SQI
Sbjct: 473 TNQKAELQAIHLALQD----SGLEVNIVTDSQYALGIIQAQPDKSESEVVSQIIE----- 523
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + V L W P+H GI GNE VD+
Sbjct: 524 ELIKKEKVYLAWVPAHKGIGGNEQVDK 550
>gi|49574424|gb|AAT66878.1| reverse transcriptase [Human immunodeficiency virus 1]
gi|49574439|gb|AAT66885.1| reverse transcriptase [Human immunodeficiency virus 1]
Length = 560
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N AEL AI L L+ + +V+DS +L I A P S ++SQI
Sbjct: 473 TNQKAELQAIHLALQD----SGLEVNIVTDSQYALGIIQAQPDKSESEVVSQIIE----- 523
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + V L W P+H GI GNE VD+
Sbjct: 524 ELIKKEKVYLAWVPAHKGIGGNEQVDK 550
>gi|49574459|gb|AAT66895.1| reverse transcriptase [Human immunodeficiency virus 1]
Length = 560
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N AEL AI L L+ + +V+DS +L I A P S ++SQI
Sbjct: 473 TNQKAELQAIHLALQD----SGLEVNIVTDSQYALGIIQAQPDKSESEVVSQIIE----- 523
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + V L W P+H GI GNE VD+
Sbjct: 524 ELIKKEKVYLAWVPAHKGIGGNEQVDK 550
>gi|49574451|gb|AAT66891.1| reverse transcriptase [Human immunodeficiency virus 1]
Length = 560
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N AEL AI L L+ + +V+DS +L I A P S ++SQI
Sbjct: 473 TNQKAELQAIHLALQD----SGLEVNIVTDSQYALGIIQAQPDKSESEVVSQIIE----- 523
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + V L W P+H GI GNE VD+
Sbjct: 524 ELIKKEKVYLAWVPAHKGIGGNEQVDK 550
>gi|341571490|gb|AEK79346.1| pol protein [Human immunodeficiency virus 1]
Length = 1003
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AI L L+ ++ +V+DS +L I A P S I+SQI
Sbjct: 628 TNQKTELQAINLALQD----SGLKVNIVTDSQYALGIIQAQPDKSESEIVSQIIE----- 678
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + V L W P+H GI GNE VD+
Sbjct: 679 QLIKKEQVYLAWVPAHKGIGGNEQVDK 705
>gi|344311756|gb|AEN04400.1| pol protein, partial [Human immunodeficiency virus 1]
Length = 562
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N AEL AI L L+ + +V+DS +L I A P S I++QI
Sbjct: 473 TNQKAELQAIQLALQD----SGLEVNIVTDSQYALGIIQAQPDKSESEIVNQIIE----- 523
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + V L W P+H GI GNE VD+
Sbjct: 524 QLINKERVYLSWVPAHKGIGGNEQVDK 550
>gi|327458373|gb|AEA76626.1| pol protein [Human immunodeficiency virus 1]
Length = 560
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 30/87 (34%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AILL L+ + +++DS +L I A P S ++SQI
Sbjct: 473 TNQKTELQAILLALQD----SGIEVNIITDSQYALGIIQAQPDKSESELVSQIIE----- 523
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + V L W P+H GI GNE VD+
Sbjct: 524 QLIKKEKVYLAWVPAHKGIGGNEQVDK 550
>gi|327458371|gb|AEA76625.1| pol protein [Human immunodeficiency virus 1]
Length = 560
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 30/87 (34%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AILL L+ + +++DS +L I A P S ++SQI
Sbjct: 473 TNQKTELQAILLALQD----SGIEVNIITDSQYALGIIQAQPDKSESELVSQIIE----- 523
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + V L W P+H GI GNE VD+
Sbjct: 524 QLIKKEKVYLAWVPAHKGIGGNEQVDK 550
>gi|327458185|gb|AEA76532.1| pol protein [Human immunodeficiency virus 1]
Length = 560
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N AEL AI L L+ +V+DS +L I A P S +++QI
Sbjct: 473 TNQKAELQAIQLALQD----SGSEVNIVTDSQYALGIIQAQPDKSESELVNQIIE----- 523
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ +G+ V L W P+H GI GNE VD+
Sbjct: 524 QLIGKERVYLSWVPAHKGIGGNEQVDK 550
>gi|327458183|gb|AEA76531.1| pol protein [Human immunodeficiency virus 1]
Length = 560
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N AEL AI L L+ +V+DS +L I A P S +++QI
Sbjct: 473 TNQKAELQAIQLALQD----SGSEVNIVTDSQYALGIIQAQPDKSESELVNQIIE----- 523
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ +G+ V L W P+H GI GNE VD+
Sbjct: 524 QLIGKERVYLSWVPAHKGIGGNEQVDK 550
>gi|256011460|gb|ACU55586.1| pol protein [Human immunodeficiency virus 1]
Length = 1012
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 30/87 (34%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AILL L+ + +++DS +L I A P S ++SQI
Sbjct: 637 TNQKTELQAILLALQD----SGIEVNIITDSQYALGIIQAQPDKSESELVSQIIE----- 687
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + V L W P+H GI GNE VD+
Sbjct: 688 QLIKKEKVYLAWVPAHKGIGGNEQVDK 714
>gi|242825393|ref|XP_002488431.1| hypothetical protein TSTA_108610 [Talaromyces stipitatus ATCC
10500]
gi|218712249|gb|EED11675.1| hypothetical protein TSTA_108610 [Talaromyces stipitatus ATCC
10500]
Length = 122
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 14/23 (60%), Positives = 15/23 (65%)
Query: 70 VKLMWCPSHCGIRGNEAVDQAAK 92
V + W P H GI GNE DQAAK
Sbjct: 15 VTIQWVPGHSGIEGNEQADQAAK 37
>gi|427783467|gb|JAA57185.1| Putative tick transposon [Rhipicephalus pulchellus]
Length = 628
Score = 36.6 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 24/85 (28%), Positives = 41/85 (48%), Gaps = 2/85 (2%)
Query: 2 FHCSNGIAELIAILLCLRSIK-NHPAMRFLLVSDSMGSLSAIANPYLSCPIISQIYSAWC 60
FH S+ AEL + L + P + ++ DS +L A+ P + ++ +++
Sbjct: 386 FHASSTAAELAGLHLAADYLAATTPQLPVAILCDSRPALQALLQPDQAGITVALLHAKLT 445
Query: 61 DLKTVGQYYVKLMWCPSHCGIRGNE 85
++ G + L W PSH GI GNE
Sbjct: 446 AIRASG-VRLSLHWLPSHVGIAGNE 469
>gi|290466036|gb|ADD25375.1| pol protein [Human immunodeficiency virus 1]
Length = 1014
Score = 36.6 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 30/87 (34%), Positives = 45/87 (51%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N AEL AIL+ L+ + +V+DS ++ I A P S ++SQI
Sbjct: 635 TNQKAELQAILMALQESEKEVN----IVTDSQYAMGIIHAQPDKSESEVVSQIIE----- 685
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + V L W P+H GI GNE VD+
Sbjct: 686 ELIKKERVYLSWVPAHKGIGGNEQVDK 712
>gi|63014631|gb|AAY25784.1| pol protein [Human immunodeficiency virus 1]
Length = 1001
Score = 36.6 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 30/87 (34%), Positives = 45/87 (51%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AI L L+ + + +V+DS +L I A P S +++QI
Sbjct: 626 TNQKTELQAIYLALQDSE----LEVNIVTDSQYALGIIQAQPDRSESELVNQIIE----- 676
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ +G+ V L W P+H GI GNE VD+
Sbjct: 677 QLIGKERVYLSWVPAHKGIGGNEQVDK 703
>gi|407915263|gb|EKG08960.1| hypothetical protein MPH_14085 [Macrophomina phaseolina MS6]
Length = 454
Score = 36.6 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 14/23 (60%), Positives = 15/23 (65%)
Query: 70 VKLMWCPSHCGIRGNEAVDQAAK 92
V+ WCP H GI GNE DQ AK
Sbjct: 275 VETRWCPGHMGITGNEEADQLAK 297
>gi|306478045|gb|ADM89397.1| pol protein [Human immunodeficiency virus 1]
Length = 848
Score = 36.6 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 30/87 (34%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AILL L+ + +V+DS +L I A P S +++QI
Sbjct: 473 TNQKTELQAILLALQD----SGLEVNIVTDSQYALGIIQAQPDKSESELVNQIIE----- 523
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + V L W P+H GI GNE VD+
Sbjct: 524 QLINKEKVYLAWVPAHKGIGGNEQVDK 550
>gi|42592280|emb|CAF29001.1| reverse transcriptase [Human immunodeficiency virus 1]
Length = 557
Score = 36.6 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 30/87 (34%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AILL L+ + +V+DS +L I A P S +++QI
Sbjct: 457 TNQKTELQAILLALQD----SGLEVNIVTDSQYALGIIQAQPDKSESELVNQIIE----- 507
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + V L W P+H GI GNE VD+
Sbjct: 508 QLINKEKVYLAWVPAHKGIGGNEQVDK 534
>gi|451170505|gb|AGF32908.1| pol protein, partial [Human immunodeficiency virus 1]
Length = 1006
Score = 36.6 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N AEL AI L L+ + +V+DS +L I A P S ++SQI
Sbjct: 631 TNQRAELQAIYLALQD----SGLTVNIVTDSQYALGIIQAQPDKSESELVSQIIE----- 681
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + V L W P+H GI GNE VD+
Sbjct: 682 QLIKKEKVYLAWVPAHKGIGGNEQVDK 708
>gi|158536528|gb|ABW72764.1| pol protein [Human immunodeficiency virus 1]
Length = 1007
Score = 36.6 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N AEL AI L L+ + +V+DS +L I A P S I++QI
Sbjct: 632 TNQKAELQAIQLALQD----SGLEVNIVTDSQYALGIIQAQPDKSESEIVNQIIE----- 682
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + V L W P+H GI GNE VD+
Sbjct: 683 QLINKEKVYLSWVPAHKGIGGNEQVDK 709
>gi|328834004|gb|AEB52462.1| pol protein, partial [Human immunodeficiency virus 1]
Length = 1001
Score = 36.6 bits (83), Expect = 2.2, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N AEL AI L L+ + +V+DS +L I A P S +++QI
Sbjct: 626 TNQKAELHAIYLALQD----SGLEVNIVTDSQYALGIIQAQPDRSESELVNQIIE----- 676
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
K + + V L W P+H GI GNE VD+
Sbjct: 677 KLIEKEKVYLSWVPAHKGIGGNEQVDK 703
>gi|256011508|gb|ACU55610.1| pol protein [Human immunodeficiency virus 1]
Length = 1006
Score = 36.6 bits (83), Expect = 2.2, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AI L L+ + + +V+DS +L I A P S I+SQI
Sbjct: 631 TNQKTELQAIYLALQDSE----LEVNIVTDSQYALGIIQAQPDKSESEIVSQIIE----- 681
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + V L W P+H GI GNE VD+
Sbjct: 682 ELIKKEXVYLAWVPAHXGIGGNEQVDK 708
>gi|238734130|gb|ACR55371.1| pol protein [Human immunodeficiency virus 1]
Length = 1001
Score = 36.6 bits (83), Expect = 2.2, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N AEL AI L L+ + +V+DS +L I A P S +++QI
Sbjct: 626 TNQKAELHAIYLALQD----SGLEVNIVTDSQYALGIIQAQPDRSESELVNQIIE----- 676
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
K + + V L W P+H GI GNE VD+
Sbjct: 677 KLIEKEKVYLSWVPAHKGIGGNEQVDK 703
>gi|238734120|gb|ACR55362.1| pol protein [Human immunodeficiency virus 1]
Length = 1001
Score = 36.6 bits (83), Expect = 2.2, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N AEL AI L L+ + +V+DS +L I A P S +++QI
Sbjct: 626 TNQKAELHAIYLALQD----SGLEVNIVTDSQYALGIIQAQPDRSESELVNQIIE----- 676
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
K + + V L W P+H GI GNE VD+
Sbjct: 677 KLIEKEKVYLSWVPAHKGIGGNEQVDK 703
>gi|93210636|gb|ABF00617.1| pol protein [Human immunodeficiency virus 1]
Length = 1010
Score = 36.6 bits (83), Expect = 2.2, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 46/87 (52%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AI L L+ + P + +V+DS +L I A P S ++SQI
Sbjct: 635 TNQKTELQAIQLALQD--SGPEVN--IVTDSQYALGIIHAQPDKSESELVSQIIE----- 685
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ +G+ V L W P+H GI GNE +D+
Sbjct: 686 QLIGKERVYLSWVPAHKGIGGNEQIDK 712
>gi|38491605|gb|AAR22004.1| pol protein [Human immunodeficiency virus 1]
Length = 997
Score = 36.6 bits (83), Expect = 2.2, Method: Composition-based stats.
Identities = 32/87 (36%), Positives = 43/87 (49%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AI L L+ +V+DS +L I A P S I++QI
Sbjct: 622 TNQKTELHAIHLALQD----SGSEVNIVTDSQYALGIIQAQPDRSESEIVNQIIE----- 672
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
K +G+ V L W P+H GI GNE VD+
Sbjct: 673 KLIGKDKVYLSWVPAHKGIGGNEQVDK 699
>gi|22596565|gb|AAN03320.1|AF457089_2 pol protein [Human immunodeficiency virus 1]
Length = 1003
Score = 36.6 bits (83), Expect = 2.2, Method: Composition-based stats.
Identities = 32/87 (36%), Positives = 43/87 (49%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AI L L+ +V+DS +L I A P S I++QI
Sbjct: 628 TNQKTELHAIHLALQD----SGSEVNIVTDSQYALGIIQAQPDRSESEIVNQIIE----- 678
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
K +G+ V L W P+H GI GNE VD+
Sbjct: 679 KLIGKDKVYLSWVPAHKGIGGNEQVDK 705
>gi|289187228|gb|ADC92193.1| pol protein [Human immunodeficiency virus 1]
Length = 659
Score = 36.2 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AILL L+ + +V+DS +L I A P S ++SQI
Sbjct: 572 TNQKTELQAILLALQD----SGVEANIVTDSQYALGIIQAQPDRSESELVSQIIE----- 622
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + V L W P+H GI GNE VD+
Sbjct: 623 QLIKKEKVYLAWVPAHKGIGGNEQVDK 649
>gi|242765602|ref|XP_002341008.1| reverse transcriptase, putative [Talaromyces stipitatus ATCC 10500]
gi|218724204|gb|EED23621.1| reverse transcriptase, putative [Talaromyces stipitatus ATCC 10500]
Length = 592
Score = 36.2 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 14/23 (60%), Positives = 15/23 (65%)
Query: 70 VKLMWCPSHCGIRGNEAVDQAAK 92
V + W P H GI GNE DQAAK
Sbjct: 369 VTIQWVPGHSGIEGNEQADQAAK 391
>gi|242765587|ref|XP_002341005.1| reverse transcriptase, putative [Talaromyces stipitatus ATCC 10500]
gi|218724201|gb|EED23618.1| reverse transcriptase, putative [Talaromyces stipitatus ATCC 10500]
Length = 1091
Score = 36.2 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 14/23 (60%), Positives = 15/23 (65%)
Query: 70 VKLMWCPSHCGIRGNEAVDQAAK 92
V + W P H GI GNE DQAAK
Sbjct: 868 VTIQWVPGHSGIEGNEQADQAAK 890
>gi|242765569|ref|XP_002341001.1| reverse transcriptase, putative [Talaromyces stipitatus ATCC 10500]
gi|218724197|gb|EED23614.1| reverse transcriptase, putative [Talaromyces stipitatus ATCC 10500]
Length = 805
Score = 36.2 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 14/23 (60%), Positives = 15/23 (65%)
Query: 70 VKLMWCPSHCGIRGNEAVDQAAK 92
V + W P H GI GNE DQAAK
Sbjct: 582 VTIQWVPGHSGIEGNEQADQAAK 604
>gi|242775815|ref|XP_002478715.1| hypothetical protein TSTA_089910 [Talaromyces stipitatus ATCC 10500]
gi|218722334|gb|EED21752.1| hypothetical protein TSTA_089910 [Talaromyces stipitatus ATCC 10500]
Length = 1141
Score = 36.2 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 14/23 (60%), Positives = 15/23 (65%)
Query: 70 VKLMWCPSHCGIRGNEAVDQAAK 92
V + W P H GI GNE DQAAK
Sbjct: 1064 VTIQWVPGHSGIEGNEQADQAAK 1086
>gi|242775805|ref|XP_002478713.1| endonuclease/reverse transcriptase, putative [Talaromyces stipitatus
ATCC 10500]
gi|218722332|gb|EED21750.1| endonuclease/reverse transcriptase, putative [Talaromyces stipitatus
ATCC 10500]
Length = 1959
Score = 36.2 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 14/23 (60%), Positives = 15/23 (65%)
Query: 70 VKLMWCPSHCGIRGNEAVDQAAK 92
V + W P H GI GNE DQAAK
Sbjct: 1736 VTIQWVPGHSGIEGNEQADQAAK 1758
>gi|242775784|ref|XP_002478709.1| reverse transcriptase, putative [Talaromyces stipitatus ATCC 10500]
gi|218722328|gb|EED21746.1| reverse transcriptase, putative [Talaromyces stipitatus ATCC 10500]
Length = 991
Score = 36.2 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 14/23 (60%), Positives = 15/23 (65%)
Query: 70 VKLMWCPSHCGIRGNEAVDQAAK 92
V + W P H GI GNE DQAAK
Sbjct: 768 VTIQWVPGHSGIEGNEQADQAAK 790
>gi|242786294|ref|XP_002480777.1| reverse transcriptase, putative [Talaromyces stipitatus ATCC 10500]
gi|218720924|gb|EED20343.1| reverse transcriptase, putative [Talaromyces stipitatus ATCC 10500]
Length = 1998
Score = 36.2 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 14/23 (60%), Positives = 15/23 (65%)
Query: 70 VKLMWCPSHCGIRGNEAVDQAAK 92
V + W P H GI GNE DQAAK
Sbjct: 1775 VTIQWVPGHSGIEGNEQADQAAK 1797
>gi|242794549|ref|XP_002482398.1| reverse transcriptase, putative [Talaromyces stipitatus ATCC 10500]
gi|218718986|gb|EED18406.1| reverse transcriptase, putative [Talaromyces stipitatus ATCC 10500]
Length = 2069
Score = 36.2 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 14/23 (60%), Positives = 15/23 (65%)
Query: 70 VKLMWCPSHCGIRGNEAVDQAAK 92
V + W P H GI GNE DQAAK
Sbjct: 1846 VTIQWVPGHSGIEGNEQADQAAK 1868
>gi|242794494|ref|XP_002482386.1| hypothetical protein TSTA_121370 [Talaromyces stipitatus ATCC
10500]
gi|218718974|gb|EED18394.1| hypothetical protein TSTA_121370 [Talaromyces stipitatus ATCC
10500]
Length = 1125
Score = 36.2 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 14/23 (60%), Positives = 15/23 (65%)
Query: 70 VKLMWCPSHCGIRGNEAVDQAAK 92
V + W P H GI GNE DQAAK
Sbjct: 902 VTIQWVPGHSGIEGNEQADQAAK 924
>gi|242794486|ref|XP_002482384.1| reverse transcriptase, putative [Talaromyces stipitatus ATCC 10500]
gi|218718972|gb|EED18392.1| reverse transcriptase, putative [Talaromyces stipitatus ATCC 10500]
Length = 1025
Score = 36.2 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 14/23 (60%), Positives = 15/23 (65%)
Query: 70 VKLMWCPSHCGIRGNEAVDQAAK 92
V + W P H GI GNE DQAAK
Sbjct: 171 VTIQWVPGHSGIEGNEQADQAAK 193
>gi|242798615|ref|XP_002483206.1| conserved hypothetical protein [Talaromyces stipitatus ATCC 10500]
gi|218716551|gb|EED15972.1| conserved hypothetical protein [Talaromyces stipitatus ATCC 10500]
Length = 533
Score = 36.2 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 14/23 (60%), Positives = 15/23 (65%)
Query: 70 VKLMWCPSHCGIRGNEAVDQAAK 92
V + W P H GI GNE DQAAK
Sbjct: 310 VTIQWVPGHSGIEGNEQADQAAK 332
>gi|242807844|ref|XP_002485040.1| reverse transcriptase, putative [Talaromyces stipitatus ATCC 10500]
gi|218715665|gb|EED15087.1| reverse transcriptase, putative [Talaromyces stipitatus ATCC 10500]
Length = 839
Score = 36.2 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 14/23 (60%), Positives = 15/23 (65%)
Query: 70 VKLMWCPSHCGIRGNEAVDQAAK 92
V + W P H GI GNE DQAAK
Sbjct: 369 VTIQWVPGHSGIEGNEQADQAAK 391
>gi|242807798|ref|XP_002485031.1| conserved hypothetical protein [Talaromyces stipitatus ATCC 10500]
gi|218715656|gb|EED15078.1| conserved hypothetical protein [Talaromyces stipitatus ATCC 10500]
Length = 361
Score = 36.2 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 14/23 (60%), Positives = 15/23 (65%)
Query: 70 VKLMWCPSHCGIRGNEAVDQAAK 92
V + W P H GI GNE DQAAK
Sbjct: 138 VTIQWVPGHSGIEGNEQADQAAK 160
>gi|242814632|ref|XP_002486407.1| conserved hypothetical protein [Talaromyces stipitatus ATCC 10500]
gi|218714746|gb|EED14169.1| conserved hypothetical protein [Talaromyces stipitatus ATCC 10500]
Length = 454
Score = 36.2 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 14/23 (60%), Positives = 15/23 (65%)
Query: 70 VKLMWCPSHCGIRGNEAVDQAAK 92
V + W P H GI GNE DQAAK
Sbjct: 231 VTIQWVPGHSGIEGNEQADQAAK 253
>gi|242824212|ref|XP_002488213.1| hypothetical protein TSTA_005890 [Talaromyces stipitatus ATCC
10500]
gi|218713134|gb|EED12559.1| hypothetical protein TSTA_005890 [Talaromyces stipitatus ATCC
10500]
Length = 874
Score = 36.2 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 14/23 (60%), Positives = 15/23 (65%)
Query: 70 VKLMWCPSHCGIRGNEAVDQAAK 92
V + W P H GI GNE DQAAK
Sbjct: 589 VTIQWVPGHSGIEGNEQADQAAK 611
>gi|242825403|ref|XP_002488433.1| conserved hypothetical protein [Talaromyces stipitatus ATCC 10500]
gi|218712251|gb|EED11677.1| conserved hypothetical protein [Talaromyces stipitatus ATCC 10500]
Length = 458
Score = 36.2 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 14/23 (60%), Positives = 15/23 (65%)
Query: 70 VKLMWCPSHCGIRGNEAVDQAAK 92
V + W P H GI GNE DQAAK
Sbjct: 242 VTIQWVPGHSGIEGNEQADQAAK 264
>gi|242825388|ref|XP_002488430.1| reverse transcriptase, putative [Talaromyces stipitatus ATCC 10500]
gi|218712248|gb|EED11674.1| reverse transcriptase, putative [Talaromyces stipitatus ATCC 10500]
Length = 1977
Score = 36.2 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 14/23 (60%), Positives = 15/23 (65%)
Query: 70 VKLMWCPSHCGIRGNEAVDQAAK 92
V + W P H GI GNE DQAAK
Sbjct: 1754 VTIQWVPGHSGIEGNEQADQAAK 1776
>gi|242825350|ref|XP_002488422.1| reverse transcriptase, putative [Talaromyces stipitatus ATCC 10500]
gi|218712240|gb|EED11666.1| reverse transcriptase, putative [Talaromyces stipitatus ATCC 10500]
Length = 1998
Score = 36.2 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 14/23 (60%), Positives = 15/23 (65%)
Query: 70 VKLMWCPSHCGIRGNEAVDQAAK 92
V + W P H GI GNE DQAAK
Sbjct: 1775 VTIQWVPGHSGIEGNEQADQAAK 1797
>gi|427791993|gb|JAA61448.1| Putative tick transposon, partial [Rhipicephalus pulchellus]
Length = 1031
Score = 36.2 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 30/92 (32%), Positives = 41/92 (44%), Gaps = 2/92 (2%)
Query: 2 FHCSNGIAELIAILLCLRSI-KNHPAMRFLLVSDSMGSLSAIANPYLSCPIISQIYSAWC 60
F S+ AEL + L + +N P ++ DS +L +AN + S + S +
Sbjct: 940 FPASSTAAELAGLHLAADLLAENLPTEPVAVLCDSRAALQTLANHRRAGLTGSLLASKFR 999
Query: 61 DLKTVGQYYVKLMWCPSHCGIRGNEAVDQAAK 92
L G V W PSH GI GNE D AK
Sbjct: 1000 ALTASGAS-VSFHWLPSHVGIAGNEEADTLAK 1030
>gi|238733914|gb|ACR55180.1| pol protein [Human immunodeficiency virus 1]
Length = 1003
Score = 36.2 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 30/87 (34%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N AEL AI L L+ + +V+DS +L I A P S ++SQI
Sbjct: 628 TNQRAELQAIYLALQD----SGLEVNIVTDSQYALGIIPAQPDKSESELVSQIIE----- 678
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + + L W P+H GI GNE VD+
Sbjct: 679 QLIKKEKIYLAWVPAHKGIGGNEQVDK 705
>gi|306478205|gb|ADM89477.1| pol protein [Human immunodeficiency virus 1]
gi|306478213|gb|ADM89481.1| pol protein [Human immunodeficiency virus 1]
Length = 848
Score = 36.2 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 30/87 (34%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AILL L+ + +V+DS +L I A P S ++S+I
Sbjct: 473 TNQKTELHAILLALQD----SGLEVNIVTDSQYALGVIHAQPDKSESELVSEIIE----- 523
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + V L W P+H GI GNE VD+
Sbjct: 524 QLIKKEKVYLTWVPAHKGIGGNEQVDK 550
>gi|306478153|gb|ADM89451.1| pol protein [Human immunodeficiency virus 1]
Length = 848
Score = 36.2 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 30/87 (34%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AILL L+ + +V+DS +L I A P S ++S+I
Sbjct: 473 TNQKTELHAILLALQD----SGLEVNIVTDSQYALGVIHAQPDKSESELVSEIIE----- 523
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + V L W P+H GI GNE VD+
Sbjct: 524 QLIKKEKVYLTWVPAHKGIGGNEQVDK 550
>gi|31559690|dbj|BAC77511.1| Gag-Pol fusion protein [Human immunodeficiency virus 1]
Length = 1438
Score = 36.2 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 30/87 (34%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AILL L+ + +V+DS +L I A P S ++SQI
Sbjct: 1063 TNQKTELQAILLALQD----SGVEVNIVTDSQYALGIIQAQPGKSESELVSQIIE----- 1113
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + V L W P+H GI GNE +D+
Sbjct: 1114 QLIKKEKVYLAWVPAHKGIGGNEQIDK 1140
>gi|339507280|gb|AEJ81052.1| pol protein [Human immunodeficiency virus 1]
Length = 656
Score = 36.2 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 43/87 (49%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AI L L+ + +V+DS +L I A P S I+SQI
Sbjct: 569 TNQKTELQAIYLALQD----SGLEVNIVTDSQYALGIIQAQPDKSESEIVSQIIE----- 619
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + V L W P+H GI GNE VD+
Sbjct: 620 QLIXKEKVYLAWVPAHKGIGGNEQVDK 646
>gi|36365408|gb|AAQ86627.1| pol protein [Human immunodeficiency virus 1]
Length = 1002
Score = 36.2 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AILL L+ + +V+DS +L I A P S +++QI
Sbjct: 627 TNQKTELQAILLALQD----SGLEINIVTDSQYALGIIQAQPDRSESEVVNQIIE----- 677
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + + L W P+H GI GNE VD+
Sbjct: 678 QLIKKEKIYLAWVPAHKGIGGNEQVDK 704
>gi|36365390|gb|AAQ86611.1| pol protein [Human immunodeficiency virus 1]
Length = 1002
Score = 36.2 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AILL L+ + +V+DS +L I A P S +++QI
Sbjct: 627 TNQKTELQAILLALQD----SGLEINIVTDSQYALGIIQAQPDRSESEVVNQIIE----- 677
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + + L W P+H GI GNE VD+
Sbjct: 678 QLIKKEKIYLAWVPAHKGIGGNEQVDK 704
>gi|242825408|ref|XP_002488434.1| reverse transcriptase, putative [Talaromyces stipitatus ATCC 10500]
gi|218712252|gb|EED11678.1| reverse transcriptase, putative [Talaromyces stipitatus ATCC 10500]
Length = 906
Score = 36.2 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 4/87 (4%)
Query: 9 AELIAILLCLR-SIKNHPAMRFLLVSDSMGSLSAI--ANPYLSCPIISQIYSAWCDLKTV 65
AEL+ + L +++ P ++ D+ ++ + A P ++ + + A L
Sbjct: 620 AELVGVATALEWALERQPLGPIWILLDAQNAIDRLKSARPGPGQALVLRAHRAVEKLAMR 679
Query: 66 GQYYVKLMWCPSHCGIRGNEAVDQAAK 92
GQ V + W P H G+ GNE DQAAK
Sbjct: 680 GQP-VTIQWVPGHSGVVGNEQADQAAK 705
>gi|451167585|gb|AGF30368.1| pol protein, partial [Human immunodeficiency virus 1]
Length = 999
Score = 36.2 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 30/87 (34%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N AEL AI L L+ +V+DS +L I A P S +++QI
Sbjct: 624 TNQKAELQAIQLALQD----SGSEVNIVTDSQYALGIIQAQPDKSESELVTQIIE----- 674
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ +G+ + L W P+H GI GNE VD+
Sbjct: 675 QLIGKERIYLSWVPAHKGIGGNEQVDK 701
>gi|409181631|gb|AFV26850.1| pol protein, partial [Human immunodeficiency virus 1]
Length = 1003
Score = 36.2 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 32/87 (36%), Positives = 46/87 (52%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AI L L+ + P + +V+DS +L I A P S +++QI
Sbjct: 628 TNQKTELHAIHLALQD--SGPEVN--IVTDSQYALGIIQAQPDRSDSELVNQIIE----- 678
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
K +G+ V L W P+H GI GNE VD+
Sbjct: 679 KLIGKDKVYLAWVPAHKGIGGNEQVDK 705
>gi|339507168|gb|AEJ80996.1| pol protein [Human immunodeficiency virus 1]
Length = 656
Score = 36.2 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 43/87 (49%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AI L L+ + +VSDS +L I A P S ++SQI
Sbjct: 569 TNQKTELQAIYLALQD----SGLEVNIVSDSQYALGIIQAQPDKSESELVSQIIE----- 619
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + V L W P+H GI GNE VD+
Sbjct: 620 ELIKKEKVYLTWVPAHKGIGGNEQVDK 646
>gi|14530238|gb|AAK65971.1|AF286237_2 pol protein, partial [Human immunodeficiency virus 1]
Length = 1003
Score = 36.2 bits (82), Expect = 2.4, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 43/87 (49%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AI L L+ + +V+DS +L I A P S I++QI
Sbjct: 628 TNQKTELHAIYLALQD----SGLEVNIVTDSQYALGIIQAQPERSESEIVNQIIE----- 678
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
K + + V L W P+H GI GNE VD+
Sbjct: 679 KLIEKERVYLSWVPAHKGIGGNEQVDK 705
>gi|3808252|gb|AAC69289.1| pol protein [Human immunodeficiency virus 1]
Length = 1003
Score = 36.2 bits (82), Expect = 2.4, Method: Composition-based stats.
Identities = 32/87 (36%), Positives = 43/87 (49%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AI L L+ +V+DS +L I A P S I++QI
Sbjct: 628 TNQKTELHAIHLALQD----SGSEVNIVTDSQYALGIIQAQPDSSESEIVNQIIE----- 678
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
K +G+ V L W P+H GI GNE VD+
Sbjct: 679 KLIGKDKVYLSWVPAHKGIGGNEQVDK 705
>gi|328834357|gb|AEB52775.1| pol protein, partial [Human immunodeficiency virus 1]
Length = 1003
Score = 36.2 bits (82), Expect = 2.4, Method: Composition-based stats.
Identities = 32/87 (36%), Positives = 43/87 (49%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AI L L+ +V+DS +L I A P S I++QI
Sbjct: 628 TNQKTELHAIHLALQD----SGSEVNIVTDSQYALGIIQAQPDSSDSEIVNQIIE----- 678
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
K +G+ V L W P+H GI GNE VD+
Sbjct: 679 KLIGKDKVYLSWVPAHKGIGGNEQVDK 705
>gi|238733905|gb|ACR55172.1| pol protein [Human immunodeficiency virus 1]
Length = 1003
Score = 36.2 bits (82), Expect = 2.4, Method: Composition-based stats.
Identities = 32/87 (36%), Positives = 43/87 (49%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AI L L+ +V+DS +L I A P S I++QI
Sbjct: 628 TNQKTELHAIHLALQD----SGSEVNIVTDSQYALGIIQAQPDSSESEIVNQIIE----- 678
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
K +G+ V L W P+H GI GNE VD+
Sbjct: 679 KLIGKDKVYLSWVPAHKGIGGNEQVDK 705
>gi|49574433|gb|AAT66882.1| reverse transcriptase [Human immunodeficiency virus 1]
Length = 560
Score = 36.2 bits (82), Expect = 2.4, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N AEL AI L L+ + +V+DS +L I A P S ++SQI
Sbjct: 473 TNQKAELQAIHLALQD----SGLEVNIVTDSQYALGIIQAQPDKSESEVVSQIIE----- 523
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + V L W P+H GI GNE VD+
Sbjct: 524 ELIKKEKVYLAWVPAHKGIGGNERVDK 550
>gi|49574427|gb|AAT66879.1| reverse transcriptase [Human immunodeficiency virus 1]
Length = 560
Score = 36.2 bits (82), Expect = 2.4, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N AEL AI L L+ + +V+DS +L I A P S ++SQI
Sbjct: 473 TNQKAELQAIHLALQD----SGLEVNIVTDSQYALGIIQAQPDKSESEVVSQIIE----- 523
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + V L W P+H GI GNE VD+
Sbjct: 524 ELIKKEKVYLAWVPAHKGIGGNERVDK 550
>gi|49574429|gb|AAT66880.1| reverse transcriptase [Human immunodeficiency virus 1]
Length = 560
Score = 36.2 bits (82), Expect = 2.4, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N AEL AI L L+ + +V+DS +L I A P S ++SQI
Sbjct: 473 TNQKAELQAIHLALQD----SGLEVNIVTDSQYALGIIQAQPDKSESEVVSQIIE----- 523
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + V L W P+H GI GNE VD+
Sbjct: 524 ELIKKEKVYLAWVPAHKGIGGNERVDK 550
>gi|49574431|gb|AAT66881.1| reverse transcriptase [Human immunodeficiency virus 1]
Length = 560
Score = 36.2 bits (82), Expect = 2.4, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N AEL AI L L+ + +V+DS +L I A P S ++SQI
Sbjct: 473 TNQKAELQAIHLALQD----SGLEVNIVTDSQYALGIIQAQPDKSESEVVSQIIE----- 523
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + V L W P+H GI GNE VD+
Sbjct: 524 ELIKKEKVYLAWVPAHKGIGGNERVDK 550
>gi|425777331|gb|EKV15512.1| hypothetical protein PDIG_26330 [Penicillium digitatum PHI26]
Length = 704
Score = 36.2 bits (82), Expect = 2.4, Method: Composition-based stats.
Identities = 17/35 (48%), Positives = 21/35 (60%), Gaps = 4/35 (11%)
Query: 59 WCDLKTVGQYYVKLMWCPSHCGIRGNEAVDQAAKD 93
WC+ K V+L W P+H GI GNEA D AK+
Sbjct: 7 WCNDKI----QVELRWVPAHEGIPGNEAADMYAKE 37
>gi|451170486|gb|AGF32891.1| pol protein, partial [Human immunodeficiency virus 1]
Length = 1002
Score = 36.2 bits (82), Expect = 2.5, Method: Composition-based stats.
Identities = 30/87 (34%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AILL L+ + +V+DS +L I A P S +++QI
Sbjct: 627 TNQKTELQAILLALQD----SGLEVNIVTDSQYALGIIQAQPDKSESELVNQIIE----- 677
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + V L W P+H GI GNE VD+
Sbjct: 678 QLINKEKVYLSWVPAHKGIGGNEQVDK 704
>gi|427797513|gb|JAA64208.1| Putative tick transposon, partial [Rhipicephalus pulchellus]
Length = 1216
Score = 36.2 bits (82), Expect = 2.5, Method: Composition-based stats.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 6/93 (6%)
Query: 8 IAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAIANPYLSCPIISQIYSAWCDLKTVGQ 67
+AE +AI L LR + + + + +++SD++ + + S P++ +S L
Sbjct: 977 LAEFLAITLALRKLSSQQS-KAIIISDALSVCIHLTSAKQS-PLLRIFWS----LVPRSL 1030
Query: 68 YYVKLMWCPSHCGIRGNEAVDQAAKDPLLSPVI 100
V+ +W P H GI NE D A L PV+
Sbjct: 1031 SEVRFLWVPGHAGIALNETADSLASASLNFPVV 1063
>gi|7144666|gb|AAF37329.1| reverse transcriptase [Human immunodeficiency virus 1]
Length = 564
Score = 36.2 bits (82), Expect = 2.5, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 43/87 (49%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AI L L+ + +V+DS +L I A P S ++SQI
Sbjct: 463 TNQKTELQAINLALQD----SGLEVNIVTDSQYALGIIQAQPDKSESELVSQIIE----- 513
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
K + + V L W P+H GI GNE VD+
Sbjct: 514 KLINKERVYLAWVPAHKGIGGNEQVDK 540
>gi|407862596|gb|EKG07745.1| hypothetical protein TCSYLVIO_001123, partial [Trypanosoma cruzi]
Length = 303
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 34/75 (45%), Gaps = 3/75 (4%)
Query: 23 NHPAMRFLLVSDSMGSLSAIANPYLSCP--IISQIYSAWCDLKTVGQYYVKLMWCPSHCG 80
H L+V+DS L+A+ LS QI+ L G + V+L +C HCG
Sbjct: 183 QHRRKTLLVVTDSQSLLAALNKGPLSQTDWTEDQIWQRLLTLACAG-WSVRLQFCYGHCG 241
Query: 81 IRGNEAVDQAAKDPL 95
+ NE DQ A +
Sbjct: 242 VHANELADQHATQTM 256
Score = 35.0 bits (79), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 33/75 (44%), Gaps = 3/75 (4%)
Query: 23 NHPAMRFLLVSDSMGSLSAIANPYLSCP--IISQIYSAWCDLKTVGQYYVKLMWCPSHCG 80
H L+V+DS L+A+ LS QI+ L G + V L +C HCG
Sbjct: 6 QHRRKTLLVVTDSQSLLAALNKGPLSQTDWTEDQIWQRLLTLTCAG-WSVHLQFCYGHCG 64
Query: 81 IRGNEAVDQAAKDPL 95
+ NE DQ A +
Sbjct: 65 VHANELADQHATQTM 79
>gi|263201014|gb|ACY70111.1| pol protein [Human immunodeficiency virus 1]
gi|451170495|gb|AGF32899.1| pol protein, partial [Human immunodeficiency virus 1]
Length = 1007
Score = 36.2 bits (82), Expect = 2.5, Method: Composition-based stats.
Identities = 30/87 (34%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AILL L+ + +V+DS +L I A P S +++QI
Sbjct: 632 TNQKTELQAILLALQD----SGLEVNIVTDSQYALGIIQAQPDKSESELVNQIIE----- 682
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + V L W P+H GI GNE VD+
Sbjct: 683 QLINKEKVYLSWVPAHKGIGGNEQVDK 709
>gi|283970318|gb|ADB54791.1| pol protein [Human immunodeficiency virus 1]
Length = 1002
Score = 36.2 bits (82), Expect = 2.5, Method: Composition-based stats.
Identities = 30/87 (34%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AILL L+ + +V+DS +L I A P S +++QI
Sbjct: 627 TNQKTELQAILLALQD----SGLEVNIVTDSQYALGIIQAQPDKSESELVNQIIE----- 677
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + V L W P+H GI GNE VD+
Sbjct: 678 QLINKEKVYLSWVPAHKGIGGNEQVDK 704
>gi|154272351|ref|XP_001537028.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150409015|gb|EDN04471.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 1753
Score = 36.2 bits (82), Expect = 2.5, Method: Composition-based stats.
Identities = 28/99 (28%), Positives = 50/99 (50%), Gaps = 11/99 (11%)
Query: 9 AELIAILLCLRSIKNHPAM-----RFLLVSDSMGSLSAIANPYLSCP--IISQIYSAWCD 61
AEL ++L L+ + + A + + +D+ ++ A+ NP S I+ +
Sbjct: 1491 AELKGLVLALQMVIDIHATGTAPGKCAIFTDNQAAVQAVRNPKNSSGQYILVEAIQVLDR 1550
Query: 62 LKTVGQYYVKLMWCPSHCGIRGNEAVDQAAK---DPLLS 97
L+ +G + V+ W P+H G+ GNE D+ AK DP L+
Sbjct: 1551 LRDLG-WEVQFHWIPAHVGVPGNEEADRLAKRAADPALN 1588
>gi|114431076|dbj|BAF31334.1| Pol [Human immunodeficiency virus 1]
gi|114431086|dbj|BAF31343.1| Pol [Human immunodeficiency virus 1]
Length = 1003
Score = 36.2 bits (82), Expect = 2.5, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL A+ L L+ ++ +V+DS L I A P S ++SQI
Sbjct: 628 TNQKTELHAVYLALQDSESEVN----IVTDSQYVLGIIQAQPDKSESELVSQIIE----- 678
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
K +G+ V L W P+H GI GNE VD+
Sbjct: 679 KLIGKDKVYLSWVPAHKGIGGNEQVDK 705
>gi|25167071|gb|AAN73835.1|AF484522_1 gag-pol fusion polyprotein [Human immunodeficiency virus 1]
Length = 1438
Score = 36.2 bits (82), Expect = 2.5, Method: Composition-based stats.
Identities = 32/91 (35%), Positives = 45/91 (49%), Gaps = 11/91 (12%)
Query: 1 MFHCSNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSA 58
M +N AEL AI L L+ + +V+DS +L I A P S ++SQI
Sbjct: 1059 MTDITNQKAELQAINLALQD----SGLEVNIVTDSQYALGIIQAQPDKSESELVSQIIE- 1113
Query: 59 WCDLKTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + V L W P+H GI GNE VD+
Sbjct: 1114 ----QLIKKEKVYLSWVPAHKGIGGNEQVDK 1140
>gi|209156841|gb|ACI39897.1| pol protein [Human immunodeficiency virus 1]
Length = 1003
Score = 36.2 bits (82), Expect = 2.5, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 47/87 (54%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N AEL AIL+ L+ + P + +V+DS +L I A P S +++QI
Sbjct: 628 TNQKAELQAILIALQD--SGPEVN--IVTDSQYALGIIQAQPDKSESELVNQIIE----- 678
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + V L W P+H GI GNE VD+
Sbjct: 679 QLINKEKVYLSWVPAHKGIGGNEQVDK 705
>gi|37682471|gb|AAQ98164.1| pol protein [Human immunodeficiency virus 1]
Length = 1000
Score = 36.2 bits (82), Expect = 2.5, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 45/87 (51%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N AEL AI L L+ K+ +V+DS +L I A P S +++QI
Sbjct: 625 TNQKAELQAIQLALQDSKSEVN----IVTDSQYALGIIQAQPDKSESELVNQIIE----- 675
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + V L W P+H GI GNE VD+
Sbjct: 676 QLINKERVYLSWVPAHKGIGGNEQVDK 702
>gi|407868030|gb|EKG08743.1| hypothetical protein TCSYLVIO_000100, partial [Trypanosoma cruzi]
Length = 128
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 41/95 (43%), Gaps = 7/95 (7%)
Query: 9 AELIAILLCLRSIK----NHPAMRFLLVSDSMGSLSAIANPYLSCP--IISQIYSAWCDL 62
E A+LL L + H L+V+DS L+A+ LS QI+ L
Sbjct: 12 TESRALLLALEKLMIPRIRHRRKTLLVVTDSQSLLAALNKGPLSQTDWTEDQIWQRLLTL 71
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQAAKDPLLS 97
G + V L +C HCG+ NE DQ A + S
Sbjct: 72 TCAG-WSVHLQFCYGHCGVHANELADQYATQTMES 105
>gi|341571469|gb|AEK79331.1| pol protein [Human immunodeficiency virus 1]
Length = 1003
Score = 36.2 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N AEL AI L L+ +V+DS +L I A P +S I++QI
Sbjct: 628 TNQKAELQAIQLALQD----SGSEVNIVTDSQYALGIIQAQPDISESEIVNQIIE----- 678
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + V L W P+H GI GNE VD+
Sbjct: 679 QLIKKEKVYLSWVPAHKGIGGNEQVDK 705
>gi|260533655|gb|ACX45062.1| pol protein [Human immunodeficiency virus 1]
Length = 1003
Score = 36.2 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 43/87 (49%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AI L L+ +V+DS +L I A P S +++QI
Sbjct: 628 TNQRTELHAIYLALQD----SGSEVNIVTDSQYALGIIQAQPDRSDSELVNQIIE----- 678
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
K +G+ V L W P+H GI GNE VD+
Sbjct: 679 KLIGKDKVYLAWVPAHKGIGGNEQVDK 705
>gi|256011194|gb|ACU55453.1| pol protein [Human immunodeficiency virus 1]
Length = 1005
Score = 36.2 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 43/87 (49%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AI L L+ + +V+DS +L I A P S ++SQI
Sbjct: 630 TNQRTELQAIQLALQD----SGLEVNIVTDSQYALGIIQAQPDKSESELVSQIIE----- 680
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
K + + V L W P+H GI GNE VD+
Sbjct: 681 KLIQKERVYLTWVPAHKGIGGNEQVDK 707
>gi|90968071|emb|CAJ57812.1| pol protein [Simian immunodeficiency virus]
Length = 1019
Score = 36.2 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 31/89 (34%), Positives = 45/89 (50%), Gaps = 15/89 (16%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSM---GSLSAIANPYLS-CPIISQIYSAWC 60
+N AEL A+LL L+ H + +V+DS G L + NP + I+ I
Sbjct: 636 TNQKAELEAVLLALK----HSGPKVNIVTDSQYVYGIL--VGNPTETDNKIVEDIIQ--- 686
Query: 61 DLKTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ +G+ V L W P+H GI GNE VD+
Sbjct: 687 --QLLGKEAVYLTWLPAHKGIGGNEQVDK 713
>gi|22596545|gb|AAN03302.1|AF457087_2 pol protein [Human immunodeficiency virus 1]
Length = 1003
Score = 36.2 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 43/87 (49%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AI L L+ +V+DS +L I A P S +++QI
Sbjct: 628 TNQRTELHAIYLALQD----SGSEVNIVTDSQYALGIIQAQPDRSESELVNQIIE----- 678
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
K +G+ V L W P+H GI GNE VD+
Sbjct: 679 KLIGKDKVYLAWVPAHKGIGGNEQVDK 705
>gi|440476794|gb|ELQ57995.1| hypothetical protein OOW_P131scaffold01740g1 [Magnaporthe oryzae
P131]
Length = 766
Score = 36.2 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 22/58 (37%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 41 AIANPYLSCPIISQIYSAWCDLKTVGQYYVKLMWCPSHCGIRGNEAVDQAAKDPLLSP 98
A+A + P S+ SA LK G V++ WCP H GI GNE D+ A + P
Sbjct: 229 AVAQTSGTKPYKSEFLSASPLLKDKG-VNVRIRWCPWHKGIEGNEKADRLADEGAKGP 285
>gi|407855659|gb|EKG06690.1| hypothetical protein TCSYLVIO_002197, partial [Trypanosoma cruzi]
Length = 237
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 41/95 (43%), Gaps = 7/95 (7%)
Query: 9 AELIAILLCLRSIK----NHPAMRFLLVSDSMGSLSAIANPYLSCP--IISQIYSAWCDL 62
E A+LL L + H L+V+DS L+A+ LS QI+ L
Sbjct: 106 TESRALLLALEKLMIPRIRHRRKTLLVVTDSQSLLAALNKGPLSQTDWTEDQIWQRLLTL 165
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQAAKDPLLS 97
G + V L +C HCG+ NE DQ A + S
Sbjct: 166 TCAG-WSVHLQFCYGHCGVHANELADQYATQTMES 199
>gi|425771876|gb|EKV10308.1| hypothetical protein PDIG_57410 [Penicillium digitatum PHI26]
Length = 124
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 19/34 (55%)
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQAAKDPLL 96
+ + Q+ + L W P H GI GNEA D A + L
Sbjct: 75 RAMEQHNISLRWAPGHTGIEGNEAADTLAGEGAL 108
>gi|56609252|gb|AAW03212.1| pol protein [Human immunodeficiency virus 1]
Length = 1003
Score = 36.2 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 32/87 (36%), Positives = 46/87 (52%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AI L L+ + P + +V+DS +L I A P S +++QI
Sbjct: 628 TNQKTELHAIHLALQD--SGPEVN--IVTDSQYALGIIQAQPDRSDSELVNQIIE----- 678
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
K +G+ V L W P+H GI GNE VD+
Sbjct: 679 KLIGKDRVYLSWVPAHKGIGGNEQVDK 705
>gi|407915598|gb|EKG09164.1| hypothetical protein MPH_13848 [Macrophomina phaseolina MS6]
Length = 275
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 24/47 (51%), Gaps = 5/47 (10%)
Query: 49 CPIISQIYSAWCDLKTVGQYY---VKLMWCPSHCGIRGNEAVDQAAK 92
P SQ S + LK+ Q V+ WCP H GI GNE DQ AK
Sbjct: 74 TPASSQ--SQFTRLKSTRQELRIPVETRWCPGHMGITGNEEADQLAK 118
>gi|327458365|gb|AEA76622.1| pol protein [Human immunodeficiency virus 1]
Length = 560
Score = 36.2 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 43/87 (49%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AILL L+ +V+DS +L I A P S I+S+I
Sbjct: 473 TNQKTELQAILLALQD----SGSEVNIVTDSQYALGIIQAQPDKSESEIVSKIIE----- 523
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + V L W P+H GI GNE VD+
Sbjct: 524 QLINKEXVYLTWVPAHKGIGGNEKVDK 550
>gi|242798560|ref|XP_002483195.1| reverse transcriptase, putative [Talaromyces stipitatus ATCC 10500]
gi|218716540|gb|EED15961.1| reverse transcriptase, putative [Talaromyces stipitatus ATCC 10500]
Length = 574
Score = 36.2 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 14/23 (60%), Positives = 15/23 (65%)
Query: 70 VKLMWCPSHCGIRGNEAVDQAAK 92
V + W P H GI GNE DQAAK
Sbjct: 472 VTIQWVPGHSGIEGNERADQAAK 494
>gi|22596284|gb|AAN03070.1|AF457058_2 pol protein [Human immunodeficiency virus 1]
Length = 1006
Score = 36.2 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 43/87 (49%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AI L L+ +V+DS +L I A P S +++QI
Sbjct: 631 TNQKTELHAIYLALQD----SGSEVNIVTDSQYALGIIQAQPDRSESELVNQIIE----- 681
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
K +G+ V L W P+H GI GNE VD+
Sbjct: 682 KLIGKDRVYLSWVPAHKGIGGNEQVDK 708
>gi|22596515|gb|AAN03275.1|AF457084_2 pol protein [Human immunodeficiency virus 1]
Length = 1000
Score = 36.2 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 43/87 (49%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AI L L+ +V+DS +L I A P S +++QI
Sbjct: 625 TNQKTELHAIYLALQD----SGSEVNIVTDSQYALGIIQAQPDRSESELVNQIIE----- 675
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
K +G+ V L W P+H GI GNE VD+
Sbjct: 676 KLIGKDRVYLSWVPAHKGIGGNEQVDK 702
>gi|440462499|gb|ELQ32527.1| hypothetical protein OOU_Y34scaffold01102g5 [Magnaporthe oryzae
Y34]
Length = 755
Score = 36.2 bits (82), Expect = 2.7, Method: Composition-based stats.
Identities = 22/58 (37%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 41 AIANPYLSCPIISQIYSAWCDLKTVGQYYVKLMWCPSHCGIRGNEAVDQAAKDPLLSP 98
A+A + P S+ SA LK G V++ WCP H GI GNE D+ A + P
Sbjct: 229 AVAQTSGTKPYKSEFLSASPLLKDKG-VNVRIRWCPWHKGIEGNEKADRLADEGAKGP 285
>gi|427792931|gb|JAA61917.1| Putative tick transposon, partial [Rhipicephalus pulchellus]
Length = 1403
Score = 36.2 bits (82), Expect = 2.7, Method: Composition-based stats.
Identities = 24/85 (28%), Positives = 41/85 (48%), Gaps = 2/85 (2%)
Query: 2 FHCSNGIAELIAILLCLRSIK-NHPAMRFLLVSDSMGSLSAIANPYLSCPIISQIYSAWC 60
FH S+ AEL + L + P + ++ DS +L A+ P + ++ +++
Sbjct: 1161 FHASSTAAELAGLHLAADHLAATPPQLPVAILCDSRPALQALLQPDQAGITVALLHAKLT 1220
Query: 61 DLKTVGQYYVKLMWCPSHCGIRGNE 85
+ G ++ L W PSH GI GNE
Sbjct: 1221 AIGASG-VHLSLHWLPSHVGIAGNE 1244
>gi|427792977|gb|JAA61940.1| Putative tick transposon, partial [Rhipicephalus pulchellus]
Length = 1311
Score = 36.2 bits (82), Expect = 2.7, Method: Composition-based stats.
Identities = 24/85 (28%), Positives = 41/85 (48%), Gaps = 2/85 (2%)
Query: 2 FHCSNGIAELIAILLCLRSIK-NHPAMRFLLVSDSMGSLSAIANPYLSCPIISQIYSAWC 60
FH S+ AEL + L + P + ++ DS +L A+ P + ++ +++
Sbjct: 1069 FHASSTAAELAGLHLAADHLAATPPQLPVAILCDSRPALQALLQPDQAGITVALLHAKLT 1128
Query: 61 DLKTVGQYYVKLMWCPSHCGIRGNE 85
+ G ++ L W PSH GI GNE
Sbjct: 1129 AIGASG-VHLSLHWLPSHVGIAGNE 1152
>gi|31980427|dbj|BAC77747.1| Pol polyprotein [Human immunodeficiency virus 1]
gi|31980437|dbj|BAC77756.1| Pol polyprotein [Human immunodeficiency virus 1]
Length = 1003
Score = 36.2 bits (82), Expect = 2.7, Method: Composition-based stats.
Identities = 32/87 (36%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N AEL AI L L+ +V+DS +L I A P S +++QI
Sbjct: 628 TNQKAELHAIHLALQD----SGSGVNIVTDSQYALGIIQAQPDRSESELVNQIIE----- 678
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
K +G+ V L W P+H GI GNE VD+
Sbjct: 679 KLIGKDKVYLSWVPAHKGIGGNEQVDK 705
>gi|5305479|gb|AAD41667.1|AF075702_2 pol protein [Human immunodeficiency virus 1]
Length = 1006
Score = 36.2 bits (82), Expect = 2.7, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 43/87 (49%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AI L L+ +V+DS +L I A P S +++QI
Sbjct: 627 TNQKTELHAIYLALQD----SGSEVNIVTDSQYALGIIQAQPDRSESELVNQIIE----- 677
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
K +G+ V L W P+H GI GNE VD+
Sbjct: 678 KLIGKDKVYLSWVPAHKGIGGNEQVDK 704
>gi|87116093|gb|ABD19625.1| pol protein [Human immunodeficiency virus 1]
Length = 1003
Score = 36.2 bits (82), Expect = 2.7, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 43/87 (49%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AI L L+ +V+DS +L I A P S +++QI
Sbjct: 628 TNQKTELHAIYLALQD----SGSEVNIVTDSQYALGIIQAQPDRSESELVNQIIE----- 678
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
K +G+ V L W P+H GI GNE VD+
Sbjct: 679 KLIGKDKVYLSWVPAHKGIGGNEQVDK 705
>gi|74315770|gb|ABA02493.1| pol protein [Human immunodeficiency virus 1]
Length = 1007
Score = 36.2 bits (82), Expect = 2.7, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 43/87 (49%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AI L L+ +V+DS +L I A P S +++QI
Sbjct: 628 TNQKTELHAIYLALQD----SGSEVNIVTDSQYALGIIQAQPDRSESELVNQIIE----- 678
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
K +G+ V L W P+H GI GNE VD+
Sbjct: 679 KLIGKDKVYLSWVPAHKGIGGNEQVDK 705
>gi|61102618|gb|AAX37753.1| pol protein [Human immunodeficiency virus 1]
Length = 427
Score = 36.2 bits (82), Expect = 2.7, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 43/87 (49%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AI L L+ +V+DS +L I A P S +++QI
Sbjct: 52 TNQKTELHAIYLALQD----SGSEVNIVTDSQYALGIIQAQPDRSESELVNQIIE----- 102
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
K +G+ V L W P+H GI GNE VD+
Sbjct: 103 KLIGKDKVYLSWVPAHKGIGGNEQVDK 129
>gi|56609282|gb|AAW03239.1| pol protein [Human immunodeficiency virus 1]
Length = 1003
Score = 36.2 bits (82), Expect = 2.7, Method: Composition-based stats.
Identities = 32/87 (36%), Positives = 46/87 (52%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AI L L+ + P + +V+DS +L I A P S +++QI
Sbjct: 628 TNQKTELHAIHLALQD--SGPEVN--IVTDSQYALGIIQAQPDRSDSELVNQIIE----- 678
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
K +G+ V L W P+H GI GNE VD+
Sbjct: 679 KLIGKDKVYLSWVPAHKGIGGNEQVDK 705
>gi|56609339|gb|AAW03289.1| pol protein [Human immunodeficiency virus 1]
Length = 1003
Score = 36.2 bits (82), Expect = 2.7, Method: Composition-based stats.
Identities = 32/87 (36%), Positives = 46/87 (52%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AI L L+ + P + +V+DS +L I A P S +++QI
Sbjct: 628 TNQKTELHAIHLALQD--SGPEVN--IVTDSQYALGIIQAQPDRSDSELVNQIIE----- 678
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
K +G+ V L W P+H GI GNE VD+
Sbjct: 679 KLIGKDKVYLSWVPAHKGIGGNEQVDK 705
>gi|263200958|gb|ACY70061.1| pol protein [Human immunodeficiency virus 1]
gi|395455244|gb|AFN61949.1| pol protein, partial [Human immunodeficiency virus 1]
Length = 1003
Score = 36.2 bits (82), Expect = 2.7, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 43/87 (49%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AI L L+ +V+DS +L I A P S +++QI
Sbjct: 628 TNQKTELHAIYLALQD----SGSEVNIVTDSQYALGIIQAQPDRSESELVNQIIE----- 678
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
K +G+ V L W P+H GI GNE VD+
Sbjct: 679 KLIGKDKVYLSWVPAHKGIGGNEQVDK 705
>gi|260533596|gb|ACX45009.1| pol protein [Human immunodeficiency virus 1]
Length = 1003
Score = 36.2 bits (82), Expect = 2.7, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 43/87 (49%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AI L L+ +V+DS +L I A P S +++QI
Sbjct: 628 TNQKTELHAIYLALQD----SGSEVNIVTDSQYALGIIQAQPDRSESELVNQIIE----- 678
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
K +G+ V L W P+H GI GNE VD+
Sbjct: 679 KLIGKDKVYLSWVPAHKGIGGNEQVDK 705
>gi|256011540|gb|ACU55626.1| pol protein [Human immunodeficiency virus 1]
Length = 1003
Score = 36.2 bits (82), Expect = 2.7, Method: Composition-based stats.
Identities = 30/87 (34%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AILL L+ +V+DS +L I A P +S +++QI
Sbjct: 628 TNQKTELQAILLALQD----SGAEXNIVTDSQYALGIIQAQPDISESELVNQIIE----- 678
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + V L W P+H GI GNE VD+
Sbjct: 679 QLIKKEKVYLAWVPAHKGIGGNEQVDK 705
>gi|256252314|dbj|BAH97353.1| Pol [Human immunodeficiency virus 1]
Length = 1003
Score = 36.2 bits (82), Expect = 2.7, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 43/87 (49%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AI L L+ +V+DS +L I A P S +++QI
Sbjct: 628 TNQKTELHAIYLALQD----SGSEVNIVTDSQYALGIIQAQPDRSESELVNQIIE----- 678
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
K +G+ V L W P+H GI GNE VD+
Sbjct: 679 KLIGKDKVYLSWVPAHKGIGGNEQVDK 705
>gi|112497802|gb|ABI20213.1| pol protein [Human immunodeficiency virus 1]
Length = 1003
Score = 36.2 bits (82), Expect = 2.7, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 43/87 (49%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AI L L+ +V+DS +L I A P S +++QI
Sbjct: 628 TNQKTELHAIYLALQD----SGSEVNIVTDSQYALGIIQAQPDRSESELVNQIIE----- 678
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
K +G+ V L W P+H GI GNE VD+
Sbjct: 679 KLIGKDKVYLSWVPAHKGIGGNEQVDK 705
>gi|112497812|gb|ABI20222.1| pol protein [Human immunodeficiency virus 1]
Length = 1003
Score = 36.2 bits (82), Expect = 2.7, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 43/87 (49%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AI L L+ +V+DS +L I A P S +++QI
Sbjct: 628 TNQKTELHAIYLALQD----SGSEVNIVTDSQYALGIIQAQPDRSESELVNQIIE----- 678
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
K +G+ V L W P+H GI GNE VD+
Sbjct: 679 KLIGKDKVYLSWVPAHKGIGGNEQVDK 705
>gi|36365417|gb|AAQ86635.1| pol protein [Human immunodeficiency virus 1]
Length = 1003
Score = 36.2 bits (82), Expect = 2.7, Method: Composition-based stats.
Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AILL L+ + +V+DS +L I A P S +++QI
Sbjct: 628 TNQKTELQAILLALQD----SGLEVNIVTDSQYALGIIQAQPDRSESEVVNQIIE----- 678
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + + L W P+H GI GNE VD+
Sbjct: 679 RLIRKEKIYLAWVPAHKGIGGNEQVDK 705
>gi|22596445|gb|AAN03212.1|AF457077_2 pol protein [Human immunodeficiency virus 1]
Length = 1003
Score = 36.2 bits (82), Expect = 2.7, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 43/87 (49%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AI L L+ +V+DS +L I A P S +++QI
Sbjct: 628 TNQKTELHAIYLALQD----SGSEVNIVTDSQYALGIIQAQPDRSESELVNQIIE----- 678
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
K +G+ V L W P+H GI GNE VD+
Sbjct: 679 KLIGKDKVYLSWVPAHKGIGGNEQVDK 705
>gi|427792937|gb|JAA61920.1| Putative tick transposon, partial [Rhipicephalus pulchellus]
Length = 1319
Score = 36.2 bits (82), Expect = 2.8, Method: Composition-based stats.
Identities = 24/85 (28%), Positives = 41/85 (48%), Gaps = 2/85 (2%)
Query: 2 FHCSNGIAELIAILLCLRSIK-NHPAMRFLLVSDSMGSLSAIANPYLSCPIISQIYSAWC 60
FH S+ AEL + L + P + ++ DS +L A+ P + ++ +++
Sbjct: 1077 FHASSTAAELAGLHLAADHLAATPPQLPVAILCDSRPALQALLQPDQAGITVALLHAKLT 1136
Query: 61 DLKTVGQYYVKLMWCPSHCGIRGNE 85
+ G ++ L W PSH GI GNE
Sbjct: 1137 AIGASG-VHLSLHWLPSHVGIAGNE 1160
>gi|256011744|gb|ACU55728.1| pol protein [Human immunodeficiency virus 1]
Length = 1003
Score = 36.2 bits (82), Expect = 2.8, Method: Composition-based stats.
Identities = 30/87 (34%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AI L L+ + +V+DS +L I A+P S ++SQI
Sbjct: 628 TNQKTELQAIYLALQD----SGLEVNIVTDSQYALGIIQAHPDKSESELVSQIIE----- 678
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + V L W P+H GI GNE VD+
Sbjct: 679 QLINKEKVYLAWVPAHKGIGGNEQVDK 705
>gi|255519543|dbj|BAH90760.1| pol protein [Human immunodeficiency virus 1]
Length = 1003
Score = 36.2 bits (82), Expect = 2.8, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 46/87 (52%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N AEL A+ L L+ + P + +V+DS +L I A P S ++SQI
Sbjct: 628 TNQKAELAAVQLALQD--SGPEVN--IVTDSQYALGIIQAQPDKSESELVSQIIE----- 678
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + V L W P+H GI GNE VD+
Sbjct: 679 QLINKEKVYLSWVPAHKGIGGNEQVDK 705
>gi|255519533|dbj|BAH90751.1| pol protein [Human immunodeficiency virus 1]
Length = 1003
Score = 36.2 bits (82), Expect = 2.8, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 46/87 (52%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N AEL A+ L L+ + P + +V+DS +L I A P S ++SQI
Sbjct: 628 TNQKAELAAVQLALQD--SGPEVN--IVTDSQYALGIIQAQPDKSESELVSQIIE----- 678
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + V L W P+H GI GNE VD+
Sbjct: 679 QLINKEKVYLSWVPAHKGIGGNEQVDK 705
>gi|5305343|gb|AAD41597.1|AF071473_2 pol protein, partial [Human immunodeficiency virus 1]
Length = 1003
Score = 36.2 bits (82), Expect = 2.9, Method: Composition-based stats.
Identities = 32/87 (36%), Positives = 46/87 (52%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AI L L+ + P + +V+DS +L I A P S +++QI
Sbjct: 628 TNQKTELQAINLALQD--SGPEVN--IVTDSQYALGIIQAQPDRSESELVNQIIE----- 678
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
K +G+ V L W P+H GI GNE VD+
Sbjct: 679 KLIGKDKVYLSWVPAHKGIGGNEQVDK 705
>gi|427798885|gb|JAA64894.1| Putative tick transposon, partial [Rhipicephalus pulchellus]
Length = 1199
Score = 35.8 bits (81), Expect = 2.9, Method: Composition-based stats.
Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 2/84 (2%)
Query: 9 AELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAIAN-PYLSCPIISQIYSAWCDLKTVGQ 67
AE AIL ++ I+ + ++ +DS+ + A+ I+ +YS C L T Q
Sbjct: 999 AEAYAILAAVKHIRELKLQKAVIYTDSLSVVKALKTLKKHKNSILVSLYSLVCTLYTAKQ 1058
Query: 68 YYVKLMWCPSHCGIRGNEAVDQAA 91
+ V + W P H I+GN D A
Sbjct: 1059 HVV-VCWVPGHREIQGNVMADHLA 1081
>gi|357610240|gb|EHJ66888.1| non-LTR retrotransposon CATS [Danaus plexippus]
Length = 476
Score = 35.8 bits (81), Expect = 2.9, Method: Composition-based stats.
Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 4/82 (4%)
Query: 4 CSNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAIANPYLSCPIISQIYSAWCDLK 63
C+ AEL+AIL ++ ++ SDS ++ AI N + P++++I+S
Sbjct: 229 CTVFQAELLAILKACEWASSNQHTSTVIYSDSSAAILAIQNRSNTHPLVAKIHSTV--HH 286
Query: 64 TVGQYYVKLMWCPSHCGIRGNE 85
T G ++ W +H GI GNE
Sbjct: 287 TSGS--IEFAWVKAHVGIVGNE 306
>gi|326416750|gb|ADZ73228.1| pol protein [Human immunodeficiency virus 1]
Length = 659
Score = 35.8 bits (81), Expect = 2.9, Method: Composition-based stats.
Identities = 30/87 (34%), Positives = 43/87 (49%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AI L L+ + +V+DS +L I A P S +++QI
Sbjct: 572 TNQKTELHAIYLALQD----SGLEVNIVTDSQYALGIIQAQPDRSESELVNQIIE----- 622
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
K + + + L W P+H GI GNE VDQ
Sbjct: 623 KLIEKERIYLSWVPAHKGIGGNEQVDQ 649
>gi|39777425|gb|AAR31002.1| pol protein [Human immunodeficiency virus 1]
Length = 1000
Score = 35.8 bits (81), Expect = 2.9, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 45/87 (51%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AI L L+ ++ +V+DS +L I A P S +++QI
Sbjct: 625 TNQKTELHAIHLALQDSESEVN----IVTDSQYALGIIQAQPDRSESELVNQIIE----- 675
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
K +G+ V L W P+H GI GNE VD+
Sbjct: 676 KLIGKDKVYLSWVPAHKGIGGNEQVDK 702
>gi|86753653|gb|ABD15071.1| pol protein [Human immunodeficiency virus 1]
Length = 1004
Score = 35.8 bits (81), Expect = 2.9, Method: Composition-based stats.
Identities = 30/87 (34%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N AEL AI L L+ + +V+DS +L I A P S I++QI
Sbjct: 625 TNQKAELQAIQLALQD----SGLEVNIVTDSQYALGIIQAQPDKSESEIVNQIIE----- 675
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + + L W P+H GI GNE VD+
Sbjct: 676 QLINKERIYLSWVPAHKGIGGNEQVDK 702
>gi|212382687|gb|ACJ25656.1| pol protein [Human immunodeficiency virus 1]
Length = 998
Score = 35.8 bits (81), Expect = 2.9, Method: Composition-based stats.
Identities = 30/87 (34%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N AEL AI L L+ + +V+DS +L I A P S I++QI
Sbjct: 623 TNQKAELQAIQLALQD----SGLEVNIVTDSQYALGIIQAQPDKSESEIVNQIIE----- 673
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + + L W P+H GI GNE VD+
Sbjct: 674 QLINKERIYLSWVPAHKGIGGNEQVDK 700
>gi|119508039|dbj|BAF42434.1| Pol [Human immunodeficiency virus 1]
gi|119508049|dbj|BAF42443.1| Pol [Human immunodeficiency virus 1]
Length = 1003
Score = 35.8 bits (81), Expect = 2.9, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 43/87 (49%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AILL L+ +V+DS L I A P S +++QI
Sbjct: 628 TNQKTELHAILLALQD----SGSEVNIVTDSQYVLGIIQAQPDRSESELVNQIIE----- 678
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ +G+ V L W P+H GI GNE VD+
Sbjct: 679 RLIGKDKVYLSWVPAHKGIGGNEQVDK 705
>gi|108860416|dbj|BAE95936.1| Pol [Human immunodeficiency virus 1]
Length = 1003
Score = 35.8 bits (81), Expect = 2.9, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 43/87 (49%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AILL L+ +V+DS L I A P S +++QI
Sbjct: 628 TNQKTELHAILLALQD----SGSEVNIVTDSQYVLGIIQAQPDRSESELVNQIIE----- 678
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ +G+ V L W P+H GI GNE VD+
Sbjct: 679 RLIGKDKVYLSWVPAHKGIGGNEQVDK 705
>gi|22596359|gb|AAN03137.1|AF457066_2 pol protein [Human immunodeficiency virus 1]
Length = 1003
Score = 35.8 bits (81), Expect = 2.9, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 43/87 (49%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AI L L+ +V+DS +L I A P S +++QI
Sbjct: 628 TNQKTELHAIYLALQD----SGSEVNIVTDSQYALGIIQAQPDKSESELVNQIIE----- 678
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
K +G+ V L W P+H GI GNE VD+
Sbjct: 679 KLIGKDKVYLSWVPAHKGIGGNEKVDK 705
>gi|238733828|gb|ACR55105.1| pol protein [Human immunodeficiency virus 1]
Length = 1003
Score = 35.8 bits (81), Expect = 3.0, Method: Composition-based stats.
Identities = 32/87 (36%), Positives = 45/87 (51%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AI L L+ + P + +V+DS +L I A P S +++QI
Sbjct: 628 TNQKTELHAIYLALQD--SGPEVN--IVTDSQYALGIIQATPDRSESELVNQIIE----- 678
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
K +G+ V L W P H GI GNE VD+
Sbjct: 679 KLIGKDKVYLSWVPPHKGIGGNEQVDK 705
>gi|242797976|ref|XP_002483073.1| hypothetical protein TSTA_009600 [Talaromyces stipitatus ATCC
10500]
gi|218716418|gb|EED15839.1| hypothetical protein TSTA_009600 [Talaromyces stipitatus ATCC
10500]
Length = 701
Score = 35.8 bits (81), Expect = 3.0, Method: Composition-based stats.
Identities = 13/24 (54%), Positives = 17/24 (70%)
Query: 70 VKLMWCPSHCGIRGNEAVDQAAKD 93
++L W P HCG GNEA D+ AK+
Sbjct: 244 LRLQWVPGHCGDPGNEAADRLAKE 267
>gi|328834450|gb|AEB52858.1| pol protein, partial [Human immunodeficiency virus 1]
Length = 999
Score = 35.8 bits (81), Expect = 3.0, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 43/87 (49%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AI L L+ +V+DS +L I A P S +++QI
Sbjct: 624 TNQKTELHAIYLALQD----SGSEVNIVTDSQYALGIIQAQPDKSESELVNQIIE----- 674
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
K +G+ V L W P+H GI GNE VD+
Sbjct: 675 KLIGKDKVYLSWVPAHKGIGGNEQVDK 701
>gi|328834386|gb|AEB52801.1| pol protein, partial [Human immunodeficiency virus 1]
Length = 1000
Score = 35.8 bits (81), Expect = 3.0, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 43/87 (49%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AI L L+ +V+DS +L I A P S +++QI
Sbjct: 625 TNQKTELHAIYLALQD----SGSEVNIVTDSQYALGIIQAQPDKSESELVNQIIE----- 675
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
K +G+ V L W P+H GI GNE VD+
Sbjct: 676 KLIGKDKVYLSWVPAHKGIGGNEQVDK 702
>gi|328834192|gb|AEB52629.1| pol protein, partial [Human immunodeficiency virus 1]
Length = 1000
Score = 35.8 bits (81), Expect = 3.0, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 43/87 (49%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AI L L+ +V+DS +L I A P S +++QI
Sbjct: 625 TNQKTELHAIYLALQD----SGSEVNIVTDSQYALGIIQAQPDKSESELVNQIIE----- 675
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
K +G+ V L W P+H GI GNE VD+
Sbjct: 676 KLIGKDKVYLSWVPAHKGIGGNEQVDK 702
>gi|134252679|gb|ABO64929.1| pol protein [Human immunodeficiency virus 1]
Length = 712
Score = 35.8 bits (81), Expect = 3.0, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 43/87 (49%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AI L L+ +V+DS +L I A P S +++QI
Sbjct: 633 TNQKTELHAIYLALQD----SGSEVNIVTDSQYALGIIQAQPDKSESELVNQIIE----- 683
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
K +G+ V L W P+H GI GNE VD+
Sbjct: 684 KLIGKDKVYLSWVPAHKGIGGNEQVDK 710
>gi|134252677|gb|ABO64928.1| pol protein [Human immunodeficiency virus 1]
Length = 726
Score = 35.8 bits (81), Expect = 3.0, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 43/87 (49%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AI L L+ +V+DS +L I A P S +++QI
Sbjct: 629 TNQKTELHAIYLALQD----SGSEVNIVTDSQYALGIIQAQPDKSESELVNQIIE----- 679
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
K +G+ V L W P+H GI GNE VD+
Sbjct: 680 KLIGKDKVYLSWVPAHKGIGGNEQVDK 706
>gi|39777385|gb|AAR30966.1| pol protein [Human immunodeficiency virus 1]
Length = 1003
Score = 35.8 bits (81), Expect = 3.0, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 43/87 (49%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AI L L+ +V+DS +L I A P S +++QI
Sbjct: 628 TNQKTELHAIYLALQD----SGSEVNIVTDSQYALGIIQAQPDKSESELVNQIIE----- 678
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
K +G+ V L W P+H GI GNE VD+
Sbjct: 679 KLIGKDKVYLSWVPAHKGIGGNEQVDK 705
>gi|22596555|gb|AAN03311.1|AF457088_2 pol protein [Human immunodeficiency virus 1]
Length = 998
Score = 35.8 bits (81), Expect = 3.0, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 43/87 (49%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AI L L+ +V+DS +L I A P S +++QI
Sbjct: 623 TNQRTELHAIYLALQD----SGSEVNIVTDSQYALGIIQAQPDRSESELVNQIIE----- 673
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
K +G+ V L W P+H GI GNE VD+
Sbjct: 674 KLIGKDKVYLSWVPAHKGIGGNEQVDK 700
>gi|22596369|gb|AAN03146.1|AF457067_2 pol protein [Human immunodeficiency virus 1]
Length = 1003
Score = 35.8 bits (81), Expect = 3.0, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 43/87 (49%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AI L L+ +V+DS +L I A P S +++QI
Sbjct: 628 TNQRTELHAIYLALQD----SGSEVNIVTDSQYALGIIHAQPDRSDSELVNQIIE----- 678
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
K +G+ V L W P+H GI GNE VD+
Sbjct: 679 KLIGKDKVYLSWVPAHKGIGGNEQVDK 705
>gi|17352345|gb|AAL01564.1| pol [Human immunodeficiency virus 1]
Length = 1001
Score = 35.8 bits (81), Expect = 3.1, Method: Composition-based stats.
Identities = 30/87 (34%), Positives = 43/87 (49%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AI L L+ +V+DS +L I A P S +++QI
Sbjct: 626 TNQKTELQAIHLALQD----SGSEVNIVTDSQYALGIIQAQPDTSESELVNQIIE----- 676
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
K +G+ V L W P+H GI GNE +D+
Sbjct: 677 KLIGKERVYLSWVPAHKGIGGNEQIDK 703
>gi|17046743|gb|AAL34761.1| pol protein [Human immunodeficiency virus 1]
Length = 1003
Score = 35.8 bits (81), Expect = 3.1, Method: Composition-based stats.
Identities = 32/87 (36%), Positives = 46/87 (52%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N AEL AI L L+ + P + +V+DS +L I A P S ++SQI
Sbjct: 624 TNQKAELHAIQLALQD--SGPEVN--IVTDSQYALGIIQAQPDKSESELVSQIIE----- 674
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + V L W P+H GI GNE VD+
Sbjct: 675 QLINKERVYLSWVPAHKGIGGNEQVDK 701
>gi|443690773|gb|ELT92824.1| hypothetical protein CAPTEDRAFT_204342 [Capitella teleta]
Length = 294
Score = 35.8 bits (81), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Query: 9 AELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAIANPYLSCPIISQIYSAWCDLKTVGQY 68
AELIAI L SI P F++ +DS+ S+ AI++ P + I+ C
Sbjct: 133 AELIAINETLTSIALLPYDEFVICTDSLSSILAISSIDFIHPYVQSIFQK-CTCLAGRDK 191
Query: 69 YVKLMWCPSHCGIRGNEAVDQAA 91
+ +WCPSH GI NE + + A
Sbjct: 192 RIIFIWCPSHVGIPENETLAKQA 214
>gi|402534193|dbj|BAM37396.1| pol protein, partial [Human immunodeficiency virus 1]
Length = 1002
Score = 35.8 bits (81), Expect = 3.1, Method: Composition-based stats.
Identities = 32/87 (36%), Positives = 43/87 (49%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AI L L+ +V+DS +L I A P S I++QI
Sbjct: 627 TNQKTELHAIHLALQD----SGSEVNIVTDSQYALGIIQAQPDNSESEIVNQIIE----- 677
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
K VG+ + L W P+H GI GNE VD+
Sbjct: 678 KLVGKDKIYLSWVPAHKGIGGNEQVDK 704
>gi|88853342|emb|CAJ01215.1| gag-pol precursor [Human immunodeficiency virus 1]
Length = 1433
Score = 35.8 bits (81), Expect = 3.2, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 43/87 (49%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AI L L+ +V+DS +L I A P +S I++QI
Sbjct: 1058 TNQKTELHAIYLALQD----SGSEVNIVTDSQYALGIIQAQPDISESEIVNQIIE----- 1108
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
K + + V L W P+H GI GNE VD+
Sbjct: 1109 KLIEKEKVYLSWVPAHKGIGGNEQVDK 1135
>gi|395455309|gb|AFN62007.1| pol protein, partial [Human immunodeficiency virus 1]
Length = 1003
Score = 35.8 bits (81), Expect = 3.2, Method: Composition-based stats.
Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AI L L+ + +V+DS +L + A P S +++QI
Sbjct: 628 TNQKTELQAIYLALQD----SGLEVNIVTDSQYALGILQAQPDKSESELVNQIIE----- 678
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ +G+ V L W P+H GI GNE VD+
Sbjct: 679 QLIGKEKVYLAWVPAHKGIGGNEQVDK 705
>gi|358376670|dbj|GAA93204.1| hypothetical protein AKAW_11316 [Aspergillus kawachii IFO 4308]
Length = 452
Score = 35.8 bits (81), Expect = 3.2, Method: Composition-based stats.
Identities = 26/72 (36%), Positives = 34/72 (47%), Gaps = 6/72 (8%)
Query: 24 HPAMRFLLVSDSMGSLSAIANPYLSC--PIISQIYSAWCDLKTVGQYYVKLMWCPSHCGI 81
HPA ++SDSM +L AI +P II I G V+L W P HC
Sbjct: 85 HPAA---ILSDSMSALQAIRSPSNRSGRRIIRAILQVASRNDARG-IPVRLQWVPRHCND 140
Query: 82 RGNEAVDQAAKD 93
GN+ D+ AK+
Sbjct: 141 PGNDEADRLAKE 152
>gi|255984026|gb|ACU46085.1| pol protein [Human immunodeficiency virus 1]
Length = 659
Score = 35.8 bits (81), Expect = 3.2, Method: Composition-based stats.
Identities = 30/87 (34%), Positives = 43/87 (49%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AI L L+ + +V+DS +L I A P S ++SQI
Sbjct: 572 TNQKTELHAIYLALQD----SGLEVNIVTDSQYALGIIQAQPDXSESELVSQIIE----- 622
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + V L W P+H GI GNE VD+
Sbjct: 623 QLIXKEXVYLAWVPAHKGIGGNEQVDK 649
>gi|19335964|emb|CAC38430.2| gag-pol fusion polyprotein precursor [Human immunodeficiency virus 1]
Length = 1445
Score = 35.8 bits (81), Expect = 3.2, Method: Composition-based stats.
Identities = 33/92 (35%), Positives = 47/92 (51%), Gaps = 12/92 (13%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAIAN-PYLS-CPIISQIYSAWCDL 62
+N AEL+A+LL L+ K +V DS L I++ P S ++ QI +L
Sbjct: 1060 TNQRAELMAVLLALQDSKE----TVNIVQDSQYVLGIISSQPTQSESSLVQQIIE---EL 1112
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ-AAKD 93
Q Y L W P+H GI GNE +D+ +KD
Sbjct: 1113 TKKEQVY--LTWVPAHKGIGGNEKIDKLVSKD 1142
>gi|33331476|gb|AAQ10920.1| pol protein [Human immunodeficiency virus 1]
Length = 1003
Score = 35.8 bits (81), Expect = 3.3, Method: Composition-based stats.
Identities = 32/87 (36%), Positives = 46/87 (52%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AI L L+ + P + +V+DS +L I A P S +++QI
Sbjct: 628 TNQKTELHAINLALQD--SGPEVN--IVTDSQYALGIIQAQPDRSKSELVNQIIE----- 678
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
K +G+ V L W P+H GI GNE VD+
Sbjct: 679 KLIGKDKVYLSWVPAHKGIGGNEQVDK 705
>gi|260533685|gb|ACX45089.1| pol protein [Human immunodeficiency virus 1]
Length = 1003
Score = 35.8 bits (81), Expect = 3.3, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 43/87 (49%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AI L L+ +V+DS +L I A P S +++QI
Sbjct: 628 TNQKTELHAIHLALQD----SGAEVNIVTDSQYALGIIQAQPDRSESELVNQIIE----- 678
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
K +G+ V L W P+H GI GNE VD+
Sbjct: 679 KLIGKDKVYLAWVPAHKGIGGNEQVDK 705
>gi|328834054|gb|AEB52506.1| pol protein, partial [Human immunodeficiency virus 1]
Length = 1003
Score = 35.8 bits (81), Expect = 3.3, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 45/87 (51%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N AEL AI L L+ + + +V+DS +L I A P S +++QI
Sbjct: 628 TNQKAELHAIHLALQDSE----LEVNIVTDSQYALGIIQAQPDRSESEVVNQIIE----- 678
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
K + + V L W P+H GI GNE VD+
Sbjct: 679 KLIEKERVYLSWVPAHKGIGGNEQVDK 705
>gi|212530056|ref|XP_002145185.1| conserved hypothetical protein [Talaromyces marneffei ATCC 18224]
gi|210074583|gb|EEA28670.1| conserved hypothetical protein [Talaromyces marneffei ATCC 18224]
Length = 425
Score = 35.8 bits (81), Expect = 3.3, Method: Composition-based stats.
Identities = 15/29 (51%), Positives = 16/29 (55%)
Query: 70 VKLMWCPSHCGIRGNEAVDQAAKDPLLSP 98
V + W P H GI GNE DQAAK P
Sbjct: 83 VTIQWVPGHNGIEGNEQADQAAKRAASKP 111
>gi|212535974|ref|XP_002148143.1| conserved hypothetical protein [Talaromyces marneffei ATCC 18224]
gi|210070542|gb|EEA24632.1| conserved hypothetical protein [Talaromyces marneffei ATCC 18224]
Length = 233
Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 16/30 (53%)
Query: 70 VKLMWCPSHCGIRGNEAVDQAAKDPLLSPV 99
V + W P H G+ GNE DQAAK P
Sbjct: 13 VTIQWVPGHNGVEGNEQADQAAKRAASKPA 42
>gi|167832986|gb|ACA02095.1| pol protein [Human immunodeficiency virus 1]
Length = 717
Score = 35.8 bits (81), Expect = 3.3, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 43/87 (49%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AI L L+ + +V+DS +L I A P S I++QI
Sbjct: 572 TNQKTELHAIYLALQD----SGLEVNIVTDSQYALGIIQAQPDRSESEIVNQIIE----- 622
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
K + + V L W P+H GI GNE VD+
Sbjct: 623 KLIEKEKVYLSWVPAHKGIGGNEQVDK 649
>gi|119507248|dbj|BAF42488.1| Pol [Human immunodeficiency virus 1]
gi|119507258|dbj|BAF42497.1| Pol [Human immunodeficiency virus 1]
Length = 1003
Score = 35.8 bits (81), Expect = 3.4, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 45/87 (51%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N AEL AI L L+ K+ +V+DS +L I A P S +++QI
Sbjct: 628 TNQKAELQAIQLALQDSKSEVN----IVTDSQYALGIIQAQPDRSESELVNQIIE----- 678
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + V L W P+H GI GNE VD+
Sbjct: 679 QLIKKEKVYLSWVPAHKGIGGNEQVDK 705
>gi|108860396|dbj|BAE95918.1| Pol [Human immunodeficiency virus 1]
Length = 1003
Score = 35.8 bits (81), Expect = 3.4, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 45/87 (51%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N AEL AI L L+ K+ +V+DS +L I A P S +++QI
Sbjct: 628 TNQKAELQAIQLALQDSKSEVN----IVTDSQYALGIIQAQPDRSESELVNQIIE----- 678
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + V L W P+H GI GNE VD+
Sbjct: 679 QLIKKEKVYLSWVPAHKGIGGNEQVDK 705
>gi|443694031|gb|ELT95266.1| hypothetical protein CAPTEDRAFT_227918 [Capitella teleta]
Length = 574
Score = 35.8 bits (81), Expect = 3.4, Method: Composition-based stats.
Identities = 13/24 (54%), Positives = 16/24 (66%)
Query: 72 LMWCPSHCGIRGNEAVDQAAKDPL 95
+ WCPSH G+ GNE D AK+ L
Sbjct: 1 MAWCPSHVGVMGNERADLLAKEAL 24
>gi|259122622|gb|ACV92593.1| pol protein [Human immunodeficiency virus 1]
Length = 1003
Score = 35.8 bits (81), Expect = 3.4, Method: Composition-based stats.
Identities = 32/87 (36%), Positives = 43/87 (49%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AI L L+ +V+DS +L I A P S +++QI
Sbjct: 628 TNQKTELHAIHLALQD----SGSEVNIVTDSQYALGIIQAQPDKSESELVNQIIE----- 678
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
K VG+ V L W P+H GI GNE VD+
Sbjct: 679 KLVGKDKVYLSWVPAHKGIGGNEQVDK 705
>gi|126567730|gb|ABO21032.1| pol protein [Human immunodeficiency virus 1]
Length = 1003
Score = 35.8 bits (81), Expect = 3.4, Method: Composition-based stats.
Identities = 32/87 (36%), Positives = 43/87 (49%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AI L L+ +V+DS +L I A P S +++QI
Sbjct: 628 TNQKTELHAIHLALQD----SGSEVNIVTDSQYALGIIQAQPDKSESELVNQIIE----- 678
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
K VG+ V L W P+H GI GNE VD+
Sbjct: 679 KLVGKDKVYLSWVPAHKGIGGNEQVDK 705
>gi|242825397|ref|XP_002488432.1| reverse transcriptase, putative [Talaromyces stipitatus ATCC 10500]
gi|218712250|gb|EED11676.1| reverse transcriptase, putative [Talaromyces stipitatus ATCC 10500]
Length = 733
Score = 35.8 bits (81), Expect = 3.5, Method: Composition-based stats.
Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 4/87 (4%)
Query: 9 AELIAILLCLR-SIKNHPAMRFLLVSDSMGSLSAI--ANPYLSCPIISQIYSAWCDLKTV 65
AEL+ + L +++ P ++ D+ ++ + A P ++ + + A L
Sbjct: 524 AELMGVATALEWALERQPLGPIWILLDAQNAIDRLKSARPGPGQALVLRAHRAVEKLAMR 583
Query: 66 GQYYVKLMWCPSHCGIRGNEAVDQAAK 92
GQ V + W P H G+ GNE DQAAK
Sbjct: 584 GQP-VTIQWVPGHSGVVGNEQADQAAK 609
>gi|242825355|ref|XP_002488423.1| reverse transcriptase, putative [Talaromyces stipitatus ATCC 10500]
gi|218712241|gb|EED11667.1| reverse transcriptase, putative [Talaromyces stipitatus ATCC 10500]
Length = 1181
Score = 35.8 bits (81), Expect = 3.5, Method: Composition-based stats.
Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 4/87 (4%)
Query: 9 AELIAILLCLR-SIKNHPAMRFLLVSDSMGSLSAI--ANPYLSCPIISQIYSAWCDLKTV 65
AEL+ + L +++ P ++ D+ ++ + A P ++ + + A L
Sbjct: 912 AELMGVATALEWALERQPLGPIWILLDAQNAIDRLKSARPGPGQALVLRAHRAVEKLAMR 971
Query: 66 GQYYVKLMWCPSHCGIRGNEAVDQAAK 92
GQ V + W P H G+ GNE DQAAK
Sbjct: 972 GQP-VTIQWVPGHSGVVGNEQADQAAK 997
>gi|260533675|gb|ACX45080.1| pol protein [Human immunodeficiency virus 1]
Length = 1000
Score = 35.8 bits (81), Expect = 3.6, Method: Composition-based stats.
Identities = 32/87 (36%), Positives = 42/87 (48%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AI L L+ +V+DS +L I A P S I+SQI
Sbjct: 625 TNQKTELHAIYLALQD----SGSEVNIVTDSQYALGIIQAQPDKSEAEIVSQIIE----- 675
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
K + + V L W P+H GI GNE VD+
Sbjct: 676 KLIDKDKVYLSWVPAHKGIGGNEQVDK 702
>gi|242797738|ref|XP_002483023.1| conserved hypothetical protein [Talaromyces stipitatus ATCC 10500]
gi|218716368|gb|EED15789.1| conserved hypothetical protein [Talaromyces stipitatus ATCC 10500]
Length = 384
Score = 35.8 bits (81), Expect = 3.6, Method: Composition-based stats.
Identities = 13/24 (54%), Positives = 17/24 (70%)
Query: 70 VKLMWCPSHCGIRGNEAVDQAAKD 93
+++ W P H I GNEA DQAAK+
Sbjct: 204 IRIRWVPGHADIPGNEAADQAAKE 227
>gi|2708267|gb|AAB92394.1| putative reverse transcriptase [Drosophila subobscura]
Length = 675
Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 50/105 (47%), Gaps = 8/105 (7%)
Query: 3 HCSNGIAELIAI---LLCLRSIKNHPAMRFL-LVSDSMGSLSAIANPYLSCPIISQIYSA 58
HCS AE+IAI L CL+ + P ++ + SDS ++ ++ S ++ +
Sbjct: 428 HCSVFQAEVIAIKEALSCLQELT--PEATYINIYSDSQAAIKSLNAITTSSATVANCRKS 485
Query: 59 WCDLKTVGQYYVKLMWCPSHCGIRGNEAVDQAAKDPLLSPVIEKK 103
++ Q+ + L+W P H I GN D+ A+ P++ K
Sbjct: 486 LHEMAY--QFVISLIWVPGHQDIEGNCIADELARAGTTIPLLNDK 528
>gi|427798087|gb|JAA64495.1| Putative tick transposon, partial [Rhipicephalus pulchellus]
Length = 440
Score = 35.8 bits (81), Expect = 3.6, Method: Composition-based stats.
Identities = 12/22 (54%), Positives = 17/22 (77%)
Query: 71 KLMWCPSHCGIRGNEAVDQAAK 92
+++W P H G+RGNEA D AA+
Sbjct: 395 RIIWAPGHQGLRGNEAADAAAR 416
>gi|1899136|gb|AAC57016.1| pol protein [Human immunodeficiency virus 1]
Length = 999
Score = 35.8 bits (81), Expect = 3.7, Method: Composition-based stats.
Identities = 30/87 (34%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N AEL AI L L+ + +V+DS +L I A P S +++QI
Sbjct: 624 TNQRAELHAIYLALQD----SGLEVNIVTDSQYALGIIQAQPDKSESELVNQIIE----- 674
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
K +G+ + L W P+H GI NE VD+
Sbjct: 675 KLIGKERIYLSWVPAHKGIGRNEQVDK 701
>gi|119508059|dbj|BAF42452.1| Pol [Human immunodeficiency virus 1]
Length = 1003
Score = 35.4 bits (80), Expect = 3.9, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 43/87 (49%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AI L L+ +V+DS +L I A P S +++QI
Sbjct: 628 TNQKTELHAIHLALQD----SGSEVNIVTDSQYALGIIQAQPDRSESELVNQIIE----- 678
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
K +G+ V L W P+H GI GNE VD+
Sbjct: 679 KLIGKDKVYLAWVPAHKGIGGNEQVDK 705
>gi|341571685|gb|AEK79480.1| pol protein, partial [Human immunodeficiency virus 1]
Length = 1003
Score = 35.4 bits (80), Expect = 3.9, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 43/87 (49%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AILL L+ +V+DS +L I A P S +++QI
Sbjct: 628 TNQKTELHAILLALQD----SGSEVNIVTDSQYALGIIQAQPDRSESEVVNQIIE----- 678
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
K + + V L W P+H GI GNE VD+
Sbjct: 679 KLIEKDKVYLAWVPAHKGIGGNEQVDK 705
>gi|39777435|gb|AAR31011.1| pol protein [Human immunodeficiency virus 1]
Length = 1003
Score = 35.4 bits (80), Expect = 4.0, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 43/87 (49%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AI L L+ +V+DS +L I A P S +++QI
Sbjct: 628 TNQKTELHAIHLALQD----SGSEVNIVTDSQFALGIIQAQPDRSESELVNQIIE----- 678
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
K +G+ V L W P+H GI GNE VD+
Sbjct: 679 KLIGKDKVYLAWVPAHKGIGGNEQVDK 705
>gi|331236443|ref|XP_003330880.1| hypothetical protein PGTG_12417 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 1101
Score = 35.4 bits (80), Expect = 4.0, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Query: 31 LVSDSMGSLSAIANPYLSCPIISQIYSAWCDLKTVGQYYVKLMWCPSHCGIRGNEAVDQA 90
+ SD+ +L +NP P S + LK + + ++L WCP H GI NE D
Sbjct: 866 IFSDNQSALMLSSNPISLSPGQSIYTDNFFRLKLL-RRTIRLFWCPGHEGITANERADSL 924
Query: 91 AK 92
AK
Sbjct: 925 AK 926
>gi|18135033|gb|AAK98803.1| RNaseH [Trypanosoma cruzi]
Length = 201
Score = 35.4 bits (80), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 40/93 (43%), Gaps = 7/93 (7%)
Query: 9 AELIAILLCLRSIK----NHPAMRFLLVSDSMGSLSAIANPYLSCP--IISQIYSAWCDL 62
E A+LL L + H L+V+DS L+A+ LS QI+ L
Sbjct: 79 TESRALLLALEKLIIPRIQHRRKTLLVVTDSQSLLAALNKGPLSQTDWTEDQIWQRLLTL 138
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQAAKDPL 95
G + V L +C HCG+ NE DQ A +
Sbjct: 139 TCAG-WSVHLQFCYGHCGVHANELADQYATQTM 170
>gi|427784665|gb|JAA57784.1| Putative tick transposon [Rhipicephalus pulchellus]
Length = 455
Score = 35.4 bits (80), Expect = 4.1, Method: Composition-based stats.
Identities = 13/23 (56%), Positives = 16/23 (69%)
Query: 70 VKLMWCPSHCGIRGNEAVDQAAK 92
V W PSHCGI GN+ D+AA+
Sbjct: 268 VTFQWLPSHCGIAGNDRADEAAR 290
>gi|156040838|ref|XP_001587405.1| hypothetical protein SS1G_11397 [Sclerotinia sclerotiorum 1980]
gi|154695781|gb|EDN95519.1| hypothetical protein SS1G_11397 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 398
Score = 35.4 bits (80), Expect = 4.2, Method: Composition-based stats.
Identities = 13/24 (54%), Positives = 18/24 (75%)
Query: 70 VKLMWCPSHCGIRGNEAVDQAAKD 93
+++ W P H I GNEAVD+AAK+
Sbjct: 251 IRIRWVPGHLNILGNEAVDKAAKE 274
>gi|392558791|gb|EIW51977.1| hypothetical protein TRAVEDRAFT_156671 [Trametes versicolor
FP-101664 SS1]
Length = 342
Score = 35.4 bits (80), Expect = 4.2, Method: Composition-based stats.
Identities = 31/103 (30%), Positives = 43/103 (41%), Gaps = 18/103 (17%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLS----------------AIANPYLS 48
+N AELIAI+ L + H L+ +DS S+S A P +
Sbjct: 175 TNNRAELIAIVRVLETTP-HTKRPLLIKTDSKYSISCFRHWMPKWLKNNFRTASGEPVKN 233
Query: 49 CPIISQIYSAWCDLKTVGQYYVKLMWCPSHCGIRGNEAVDQAA 91
P+I + SA DL+ + L + H G GNE DQ A
Sbjct: 234 APLIRYL-SALLDLRAREGQKIHLQYIKGHAGHEGNEGADQQA 275
>gi|294931605|ref|XP_002779950.1| hypothetical protein Pmar_PMAR025318 [Perkinsus marinus ATCC
50983]
gi|239889684|gb|EER11745.1| hypothetical protein Pmar_PMAR025318 [Perkinsus marinus ATCC
50983]
Length = 119
Score = 35.4 bits (80), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 14/22 (63%), Positives = 17/22 (77%)
Query: 70 VKLMWCPSHCGIRGNEAVDQAA 91
V+L WCP H G++ NEAVDQ A
Sbjct: 32 VQLNWCPGHEGVQWNEAVDQLA 53
>gi|328834396|gb|AEB52810.1| pol protein, partial [Human immunodeficiency virus 1]
Length = 1000
Score = 35.4 bits (80), Expect = 4.3, Method: Composition-based stats.
Identities = 30/87 (34%), Positives = 43/87 (49%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AI L L+ +V+DS +L I A P S +++QI
Sbjct: 625 TNQKTELHAIYLALQD----SGSEVNIVTDSQYALGIIQAQPDKSESELVNQIIE----- 675
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
K +G+ + L W P+H GI GNE VD+
Sbjct: 676 KLIGKDKIYLSWVPAHKGIGGNEQVDK 702
>gi|427791865|gb|JAA61384.1| Putative tick transposon, partial [Rhipicephalus pulchellus]
Length = 1126
Score = 35.4 bits (80), Expect = 4.3, Method: Composition-based stats.
Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 10/47 (21%)
Query: 68 YYVKLMWCPSHCGIRGNEAVDQAAK-------DPLLS---PVIEKKI 104
++ +L+WCP H G+ GNE D A+ +P LS P++ ++I
Sbjct: 1012 HHHRLIWCPGHAGLEGNERADALARAFCNRAENPSLSLTIPILPREI 1058
>gi|87116101|gb|ABD19632.1| pol protein [Human immunodeficiency virus 1]
Length = 999
Score = 35.4 bits (80), Expect = 4.3, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 43/87 (49%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AI L L+ +V+DS ++ I A P S I++QI
Sbjct: 624 TNQKTELHAIHLALQD----SGSEVNIVTDSQYAIGIIQAQPDRSESEIVNQIIE----- 674
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
K +G+ V L W P+H GI GNE VD+
Sbjct: 675 KLIGKDKVYLSWVPAHKGIGGNEQVDK 701
>gi|242765583|ref|XP_002341004.1| conserved hypothetical protein [Talaromyces stipitatus ATCC 10500]
gi|218724200|gb|EED23617.1| conserved hypothetical protein [Talaromyces stipitatus ATCC 10500]
Length = 361
Score = 35.4 bits (80), Expect = 4.3, Method: Composition-based stats.
Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 4/87 (4%)
Query: 9 AELIAILLCLR-SIKNHPAMRFLLVSDSMGSLSAI--ANPYLSCPIISQIYSAWCDLKTV 65
AEL+ + L +++ P ++ D+ ++ + A P ++ + + A L
Sbjct: 103 AELMGVATALEWALERQPLGPIWVLLDAQNAIDRLKSARPGPGQALVLRAHRAVEKLAMR 162
Query: 66 GQYYVKLMWCPSHCGIRGNEAVDQAAK 92
GQ V + W P H G+ GNE DQAAK
Sbjct: 163 GQP-VTIQWVPGHSGVVGNEQADQAAK 188
>gi|242807803|ref|XP_002485032.1| conserved hypothetical protein [Talaromyces stipitatus ATCC 10500]
gi|218715657|gb|EED15079.1| conserved hypothetical protein [Talaromyces stipitatus ATCC 10500]
Length = 550
Score = 35.4 bits (80), Expect = 4.3, Method: Composition-based stats.
Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 4/87 (4%)
Query: 9 AELIAILLCLR-SIKNHPAMRFLLVSDSMGSLSAI--ANPYLSCPIISQIYSAWCDLKTV 65
AEL+ + L +++ P ++ D+ ++ + A P ++ + + A L
Sbjct: 234 AELMGVATALEWALERQPLGPIWVLLDAQNAIDRLKSARPGPGQALVLRAHRAVEKLAMR 293
Query: 66 GQYYVKLMWCPSHCGIRGNEAVDQAAK 92
GQ V + W P H G+ GNE DQAAK
Sbjct: 294 GQP-VTIQWVPGHSGVVGNEQADQAAK 319
>gi|307189101|gb|EFN73572.1| hypothetical protein EAG_08495 [Camponotus floridanus]
Length = 246
Score = 35.4 bits (80), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 40/87 (45%), Gaps = 2/87 (2%)
Query: 9 AELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAIANPYLSCPIISQIYSAWCDLKT--VG 66
AE IAI+ + I R + +DS + ++N L + I + L++ V
Sbjct: 33 AECIAIMCAMDYILEEGIKRSAIFTDSRSMVETLSNGLLDRDLSYLILALKNKLRSAYVQ 92
Query: 67 QYYVKLMWCPSHCGIRGNEAVDQAAKD 93
V ++W PSH GI GNE D A +
Sbjct: 93 NLDVVIVWVPSHVGILGNETADLLAGE 119
>gi|2735953|gb|AAB94030.1| reverse transcriptase [Aphonopelma sp. WDB-1998]
Length = 743
Score = 35.4 bits (80), Expect = 4.4, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Query: 31 LVSDSMGSLSAIANPYLSCPIISQIYSAWCDLKTVGQYYVKLMWCPSHCGIRGNEAVDQA 90
+++DS SL A+ANP ++ + +A+ L G V+ W H GN+ D A
Sbjct: 553 VITDSQSSLQALANPSCDWLLVMRAKAAYRQLLRNG-VAVRFFWTKGHATCEGNKIADSA 611
Query: 91 AKD 93
A++
Sbjct: 612 ARE 614
>gi|212541120|ref|XP_002150715.1| reverse transcriptase, putative [Talaromyces marneffei ATCC 18224]
gi|210068014|gb|EEA22106.1| reverse transcriptase, putative [Talaromyces marneffei ATCC 18224]
Length = 992
Score = 35.4 bits (80), Expect = 4.4, Method: Composition-based stats.
Identities = 14/29 (48%), Positives = 16/29 (55%)
Query: 70 VKLMWCPSHCGIRGNEAVDQAAKDPLLSP 98
V + W P H G+ GNE DQAAK P
Sbjct: 798 VTIQWVPGHNGVEGNEQADQAAKRAASKP 826
>gi|407840617|gb|EKG00530.1| hypothetical protein TCSYLVIO_008518, partial [Trypanosoma cruzi]
Length = 426
Score = 35.4 bits (80), Expect = 4.5, Method: Composition-based stats.
Identities = 29/91 (31%), Positives = 40/91 (43%), Gaps = 7/91 (7%)
Query: 13 AILLCLRSIK----NHPAMRFLLVSDSMGSLSAIANPYLSCP--IISQIYSAWCDLKTVG 66
A+LL L + H L+ +DS L+A+ LS QI+ L G
Sbjct: 151 ALLLALEKLMIPRIQHRRKTLLVFTDSQSLLAALNKGSLSQTDWTEDQIWQRLLTLTCAG 210
Query: 67 QYYVKLMWCPSHCGIRGNEAVDQAAKDPLLS 97
+ V L +C HCG+ NE VDQ A + S
Sbjct: 211 -WSVHLQFCYGHCGVHANELVDQYATQTMES 240
>gi|119507298|dbj|BAF42533.1| Pol [Human immunodeficiency virus 1]
Length = 1003
Score = 35.4 bits (80), Expect = 4.5, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 43/87 (49%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AILL L+ +V+DS +L I A P S +++ I
Sbjct: 628 TNQKTELHAILLALQD----SGSAVNIVTDSQYALGIIHAQPDRSESELVNNIIE----- 678
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
K +G+ V L W P+H GI GNE VD+
Sbjct: 679 KLIGKDKVYLSWVPAHKGIGGNEQVDK 705
>gi|119507288|dbj|BAF42524.1| Pol [Human immunodeficiency virus 1]
Length = 1003
Score = 35.4 bits (80), Expect = 4.5, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 43/87 (49%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AILL L+ +V+DS +L I A P S +++ I
Sbjct: 628 TNQKTELHAILLALQD----SGSAVNIVTDSQYALGIIHAQPDRSESELVNNIIE----- 678
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
K +G+ V L W P+H GI GNE VD+
Sbjct: 679 KLIGKDKVYLSWVPAHKGIGGNEQVDK 705
>gi|443730613|gb|ELU16038.1| hypothetical protein CAPTEDRAFT_206814 [Capitella teleta]
Length = 233
Score = 35.4 bits (80), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 13/24 (54%), Positives = 17/24 (70%)
Query: 72 LMWCPSHCGIRGNEAVDQAAKDPL 95
++WCPSH G+ GNE D AK+ L
Sbjct: 83 ILWCPSHIGVVGNERADLLAKEAL 106
>gi|61102521|gb|AAX37669.1| pol protein [Human immunodeficiency virus 1]
gi|61102553|gb|AAX37697.1| pol protein [Human immunodeficiency virus 1]
Length = 427
Score = 35.4 bits (80), Expect = 4.5, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 43/87 (49%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AI L L+ +V+DS +L I A P S +++QI
Sbjct: 52 TNQKTELHAIHLALQD----SGSEVNIVTDSQYALGIIQAQPDRSESELVNQIIE----- 102
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
K +G+ V L W P+H GI GNE VD+
Sbjct: 103 KLIGKDKVYLSWVPAHKGIGGNEQVDK 129
>gi|61102661|gb|AAX37790.1| pol protein [Human immunodeficiency virus 1]
Length = 427
Score = 35.4 bits (80), Expect = 4.5, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 43/87 (49%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AI L L+ +V+DS +L I A P S +++QI
Sbjct: 52 TNQKTELHAIHLALQD----SGSEVNIVTDSQYALGIIQAQPDRSESELVNQIIE----- 102
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
K +G+ V L W P+H GI GNE VD+
Sbjct: 103 KLIGKDKVYLSWVPAHKGIGGNEQVDK 129
>gi|61102669|gb|AAX37797.1| pol protein [Human immunodeficiency virus 1]
Length = 427
Score = 35.4 bits (80), Expect = 4.5, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 43/87 (49%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AI L L+ +V+DS +L I A P S +++QI
Sbjct: 52 TNQKTELHAIHLALQD----SGSEVNIVTDSQYALGIIQAQPDRSESELVNQIIE----- 102
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
K +G+ V L W P+H GI GNE VD+
Sbjct: 103 KLIGKDKVYLSWVPAHKGIGGNEQVDK 129
>gi|61102610|gb|AAX37746.1| pol protein [Human immunodeficiency virus 1]
Length = 427
Score = 35.4 bits (80), Expect = 4.5, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 43/87 (49%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AI L L+ +V+DS +L I A P S +++QI
Sbjct: 52 TNQKTELHAIHLALQD----SGSEVNIVTDSQYALGIIQAQPDRSESELVNQIIE----- 102
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
K +G+ V L W P+H GI GNE VD+
Sbjct: 103 KLIGKDKVYLSWVPAHKGIGGNEQVDK 129
>gi|350432447|gb|AEQ28482.1| pol protein [Human immunodeficiency virus 1]
Length = 1002
Score = 35.4 bits (80), Expect = 4.5, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 43/87 (49%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AI L L+ +V+DS +L I A P S +++QI
Sbjct: 627 TNQKTELHAIHLALQD----SGSEVNIVTDSQYALGIIQAQPDRSESELVNQIIE----- 677
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
K +G+ V L W P+H GI GNE VD+
Sbjct: 678 KLIGKDKVYLSWVPAHKGIGGNEQVDK 704
>gi|328834183|gb|AEB52621.1| pol protein, partial [Human immunodeficiency virus 1]
Length = 1000
Score = 35.4 bits (80), Expect = 4.5, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 43/87 (49%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AI L L+ +V+DS +L I A P S +++QI
Sbjct: 625 TNQKTELHAIHLALQD----SGSEVNIVTDSQYALGIIQAQPDRSESELVNQIIE----- 675
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
K +G+ V L W P+H GI GNE VD+
Sbjct: 676 KLIGKDKVYLSWVPAHKGIGGNEQVDK 702
>gi|238734246|gb|ACR55474.1| pol protein [Human immunodeficiency virus 1]
Length = 1000
Score = 35.4 bits (80), Expect = 4.5, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 43/87 (49%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AI L L+ +V+DS +L I A P S +++QI
Sbjct: 625 TNQKTELHAIHLALQD----SGSEVNIVTDSQYALGIIQAQPDRSESELVNQIIE----- 675
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
K +G+ V L W P+H GI GNE VD+
Sbjct: 676 KLIGKDKVYLSWVPAHKGIGGNEQVDK 702
>gi|158967369|gb|ABW86716.1| pol protein [Human immunodeficiency virus 1]
Length = 1004
Score = 35.4 bits (80), Expect = 4.5, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 43/87 (49%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AI L L+ +V+DS +L I A P S +++QI
Sbjct: 629 TNQKTELHAIHLALQD----SGSEVNIVTDSQYALGIIQAQPDRSESELVNQIIE----- 679
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
K +G+ V L W P+H GI GNE VD+
Sbjct: 680 KLIGKDKVYLSWVPAHKGIGGNEQVDK 706
>gi|158967339|gb|ABW86689.1| pol protein [Human immunodeficiency virus 1]
gi|158967418|gb|ABW86760.1| pol protein [Human immunodeficiency virus 1]
Length = 1003
Score = 35.4 bits (80), Expect = 4.5, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 43/87 (49%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AI L L+ +V+DS +L I A P S +++QI
Sbjct: 628 TNQKTELHAIHLALQD----SGSEVNIVTDSQYALGIIQAQPDRSDSELVNQIIE----- 678
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
K +G+ V L W P+H GI GNE VD+
Sbjct: 679 KLIGKDKVYLSWVPAHKGIGGNEQVDK 705
>gi|108860426|dbj|BAE95945.1| Pol [Human immunodeficiency virus 1]
Length = 1003
Score = 35.4 bits (80), Expect = 4.5, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 43/87 (49%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AI L L+ +V+DS +L I A P S +++QI
Sbjct: 628 TNQKTELHAIHLALQD----SGSEVNIVTDSQYALGIIQAQPDRSESELVNQIIE----- 678
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
K +G+ V L W P+H GI GNE VD+
Sbjct: 679 KLIGKDKVYLSWVPAHKGIGGNEQVDK 705
>gi|39777375|gb|AAR30957.1| pol protein [Human immunodeficiency virus 1]
Length = 1003
Score = 35.4 bits (80), Expect = 4.5, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 43/87 (49%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AI L L+ +V+DS +L I A P S +++QI
Sbjct: 628 TNQKTELHAIHLALQD----SGSEVNIVTDSQYALGIIQAQPDRSESELVNQIIE----- 678
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
K +G+ V L W P+H GI GNE VD+
Sbjct: 679 KLIGKDKVYLSWVPAHKGIGGNEQVDK 705
>gi|37682441|gb|AAQ98137.1| pol protein [Human immunodeficiency virus 1]
Length = 1003
Score = 35.4 bits (80), Expect = 4.5, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 43/87 (49%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AI L L+ +V+DS +L I A P S +++QI
Sbjct: 628 TNQKTELHAIHLALQD----SGSEVNIVTDSQYALGIIQAQPDRSESELVNQIIE----- 678
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
K +G+ V L W P+H GI GNE VD+
Sbjct: 679 KLIGKDKVYLSWVPAHKGIGGNEQVDK 705
>gi|33331466|gb|AAQ10911.1| pol protein [Human immunodeficiency virus 1]
Length = 1003
Score = 35.4 bits (80), Expect = 4.5, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 43/87 (49%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AI L L+ +V+DS +L I A P S +++QI
Sbjct: 628 TNQKTELHAIHLALQD----SGSEVNIVTDSQYALGIIQAQPDRSESELVNQIIE----- 678
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
K +G+ V L W P+H GI GNE VD+
Sbjct: 679 KLIGKDKVYLSWVPAHKGIGGNEQVDK 705
>gi|22596420|gb|AAN03191.1|AF457073_2 pol protein [Human immunodeficiency virus 1]
Length = 1003
Score = 35.4 bits (80), Expect = 4.5, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 43/87 (49%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AI L L+ +V+DS +L I A P S +++QI
Sbjct: 628 TNQKTELHAIHLALQD----SGSEVNIVTDSQYALGIIQAQPDRSESELVNQIIE----- 678
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
K +G+ V L W P+H GI GNE VD+
Sbjct: 679 KLIGKDKVYLSWVPAHKGIGGNEQVDK 705
>gi|427783969|gb|JAA57436.1| Putative tick transposon [Rhipicephalus pulchellus]
Length = 278
Score = 35.4 bits (80), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 14/92 (15%)
Query: 4 CSNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAIANPYLSCPIISQIYSAWCDLK 63
S AE AI L +R + + L++SDS + YL+ +S+I + K
Sbjct: 58 ASVSTAESAAIALAIRDAE-YKTQDALVISDSQSACRQ----YLTG-AVSKITA-----K 106
Query: 64 TVG---QYYVKLMWCPSHCGIRGNEAVDQAAK 92
+G + Y ++WCP+H G+ GNE D A+
Sbjct: 107 ILGPHIEQYHAVIWCPAHAGLEGNERADGIAR 138
>gi|407920660|gb|EKG13846.1| hypothetical protein MPH_08978 [Macrophomina phaseolina MS6]
Length = 606
Score = 35.4 bits (80), Expect = 4.6, Method: Composition-based stats.
Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 11/75 (14%)
Query: 24 HPAMRFLLVSDSMGSLSAIANP------YLSCPIISQIYSAWCDLKTVGQYYVKLMWCPS 77
H R + +D+ +L A+ P YL II+++ L+ G ++ W PS
Sbjct: 357 HRKRRIAVFTDNQAALRALVTPSEQSGQYLLRSIIAKLIG----LQQQG-VLIEFHWVPS 411
Query: 78 HCGIRGNEAVDQAAK 92
H G+ GNE D+ AK
Sbjct: 412 HQGVPGNEEADRLAK 426
>gi|260533645|gb|ACX45053.1| pol protein [Human immunodeficiency virus 1]
Length = 1003
Score = 35.4 bits (80), Expect = 4.6, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 43/87 (49%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AILL L+ +V+DS +L I A P S I++QI
Sbjct: 628 TNQKTELHAILLALQD----SGSEVNIVTDSQYALGIIQAQPDKSESEIVNQIIE----- 678
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
K + + + L W P+H GI GNE VD+
Sbjct: 679 KLIEKDKIYLSWVPAHKGIGGNEQVDK 705
>gi|393702202|gb|AFN16293.1| L1Tc protein [Trypanosoma cruzi]
Length = 1524
Score = 35.4 bits (80), Expect = 4.8, Method: Composition-based stats.
Identities = 29/91 (31%), Positives = 40/91 (43%), Gaps = 7/91 (7%)
Query: 13 AILLCLRSIK----NHPAMRFLLVSDSMGSLSAIANPYLSCP--IISQIYSAWCDLKTVG 66
A+LL L + H L+V+DS L+A+ LS QI+ L G
Sbjct: 1144 ALLLALEKLMIPRIRHRRKTLLVVTDSQSLLAALNKGPLSQTDWTEDQIWQRLLTLTCAG 1203
Query: 67 QYYVKLMWCPSHCGIRGNEAVDQAAKDPLLS 97
+ V L +C HCG+ NE DQ A + S
Sbjct: 1204 -WSVHLQFCYGHCGVHANELADQYATQTMES 1233
>gi|260533606|gb|ACX45018.1| pol protein [Human immunodeficiency virus 1]
Length = 1003
Score = 35.4 bits (80), Expect = 4.9, Method: Composition-based stats.
Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AI L L+ +V+DS ++ I A P S +++QI
Sbjct: 628 TNQKTELHAIYLALQD----SGSEVNIVTDSQYAIGIIQAQPDRSESEVVNQIIE----- 678
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
K +G+ V L W P+H GI GNE +D+
Sbjct: 679 KLIGKDKVYLAWVPAHKGIGGNEQIDK 705
>gi|61102569|gb|AAX37711.1| pol protein [Human immunodeficiency virus 1]
Length = 427
Score = 35.0 bits (79), Expect = 4.9, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 43/87 (49%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AI L L+ +V+DS +L I A P S +++QI
Sbjct: 52 TNQKTELHAIHLALQD----SGSEVNIVTDSQYALGIIQAQPDKSESELVNQIIE----- 102
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
K +G+ V L W P+H GI GNE VD+
Sbjct: 103 KLIGKDKVYLSWVPAHKGIGGNEQVDK 129
>gi|61102545|gb|AAX37690.1| pol protein [Human immunodeficiency virus 1]
Length = 427
Score = 35.0 bits (79), Expect = 4.9, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 43/87 (49%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AI L L+ +V+DS +L I A P S +++QI
Sbjct: 52 TNQKTELHAIHLALQD----SGSEVNIVTDSQYALGIIQAQPDKSESELVNQIIE----- 102
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
K +G+ V L W P+H GI GNE VD+
Sbjct: 103 KLIGKDKVYLSWVPAHKGIGGNEQVDK 129
>gi|402534163|dbj|BAM37369.1| pol protein, partial [Human immunodeficiency virus 1]
Length = 1003
Score = 35.0 bits (79), Expect = 4.9, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 43/87 (49%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AI L L+ +V+DS +L I A P S +++QI
Sbjct: 628 TNQKTELHAIHLALQD----SGSEVNIVTDSQYALGIIQAQPDKSESELVNQIIE----- 678
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
K +G+ V L W P+H GI GNE VD+
Sbjct: 679 KLIGKDKVYLSWVPAHKGIGGNEQVDK 705
>gi|158967319|gb|ABW86671.1| pol protein [Human immunodeficiency virus 1]
Length = 1001
Score = 35.0 bits (79), Expect = 4.9, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 43/87 (49%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AI L L+ +V+DS +L I A P S +++QI
Sbjct: 626 TNQKTELHAIHLALQD----SGSEVNIVTDSQYALGIIQAQPDKSESELVNQIIE----- 676
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
K +G+ V L W P+H GI GNE VD+
Sbjct: 677 KLIGKDKVYLSWVPAHKGIGGNEQVDK 703
>gi|7657890|emb|CAB89144.1| pol protein [Human immunodeficiency virus 1]
Length = 1003
Score = 35.0 bits (79), Expect = 4.9, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 43/87 (49%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N EL AI L L+ +V+DS +L I A P S +++QI
Sbjct: 628 TNQKTELHAIHLALQD----SGSEVNIVTDSQYALGIIQAQPDKSESELVNQIIE----- 678
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
K +G+ V L W P+H GI GNE VD+
Sbjct: 679 KLIGKDKVYLSWVPAHKGIGGNEQVDK 705
>gi|1086126|pir||S46347 pol polyprotein - simian immunodeficiency virus SIVagm (isolate
SAB-1)
gi|466231|gb|AAA21505.1| pol protein [Simian immunodeficiency virus - agm.sab-1]
Length = 1039
Score = 35.0 bits (79), Expect = 5.0, Method: Composition-based stats.
Identities = 26/87 (29%), Positives = 42/87 (48%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAIANPYLSCP--IISQIYSAWCDL 62
+N AEL AILL LR + +++DS ++ IA I+ QI
Sbjct: 660 TNQKAELEAILLALRD----SGSKVNIITDSQYAMGIIAGEPTESDNNIVQQIIE----- 710
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + V + W P+H G+ GNE +D+
Sbjct: 711 ELIKKEAVYIAWVPAHKGVGGNEEIDK 737
>gi|308542720|gb|ADO34204.1| pol protein [Simian immunodeficiency virus - agm.Sab92018]
Length = 1039
Score = 35.0 bits (79), Expect = 5.0, Method: Composition-based stats.
Identities = 29/87 (33%), Positives = 47/87 (54%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAIA-NPYLSCPI-ISQIYSAWCDL 62
+N AEL A+LL LRS + P + +V+DS ++ +A P S I + QI
Sbjct: 660 TNQKAELEAVLLALRS--SGPKVN--IVTDSQYAMGIVAGEPTESDNILVQQIIE----- 710
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
+ + + V + W P+H G+ GNE +D+
Sbjct: 711 ELIRKEAVYISWVPAHKGVGGNEEIDK 737
>gi|1166378|gb|AAA85636.1| reverse transcriptase, RNaseH [Colletotrichum gloeosporioides]
Length = 1096
Score = 35.0 bits (79), Expect = 5.1, Method: Composition-based stats.
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 57 SAWCDLKTVGQYY-VKLMWCPSHCGIRGNEAVDQAAKDPLLSPV 99
+A+ +++ V + Y ++ W P H GI+GNE D AK+ PV
Sbjct: 962 AAFLEIQAVARIYNIQTHWSPGHQGIKGNEEADILAKEGTTLPV 1005
>gi|242786310|ref|XP_002480780.1| hypothetical protein TSTA_035720 [Talaromyces stipitatus ATCC
10500]
gi|218720927|gb|EED20346.1| hypothetical protein TSTA_035720 [Talaromyces stipitatus ATCC
10500]
Length = 314
Score = 35.0 bits (79), Expect = 5.1, Method: Composition-based stats.
Identities = 22/48 (45%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
Query: 49 CPIISQIYSAWC-DLKT---VGQYYVKLMWCPSHCGIRGNEAVDQAAK 92
C I Q Y C DL V V L W P+H G+ GNEA D+AAK
Sbjct: 189 CVFIGQTYIRDCVDLLRKCLVEDIDVTLRWIPAHEGVPGNEAADRAAK 236
>gi|321461852|gb|EFX72880.1| hypothetical protein DAPPUDRAFT_325810 [Daphnia pulex]
Length = 268
Score = 35.0 bits (79), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Query: 52 ISQIYSAWCDLKTVGQYYVKLMWCPSHCGIRGNEAVDQAA 91
I+ I LK+ G +L W PSH GI GNE D+ A
Sbjct: 181 ITAIREIIASLKSSGTR-TRLTWIPSHTGIEGNERTDRLA 219
>gi|321456607|gb|EFX67710.1| hypothetical protein DAPPUDRAFT_261174 [Daphnia pulex]
Length = 268
Score = 35.0 bits (79), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Query: 52 ISQIYSAWCDLKTVGQYYVKLMWCPSHCGIRGNEAVDQAA 91
I+ I LK+ G +L W PSH GI GNE D+ A
Sbjct: 181 ITAIREIIASLKSSGTR-TRLTWIPSHTGIEGNERTDRLA 219
>gi|7493944|pir||S72620 probable reverse transcriptase - anthracnose fungus (Colletotrichum
gloeosporioides) retrotransposon CgT1 (fragment)
Length = 1206
Score = 35.0 bits (79), Expect = 5.4, Method: Composition-based stats.
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 57 SAWCDLKTVGQYY-VKLMWCPSHCGIRGNEAVDQAAKDPLLSPV 99
+A+ +++ V + Y ++ W P H GI+GNE D AK+ PV
Sbjct: 1072 AAFLEIQAVARIYNIQTHWSPGHQGIKGNEEADILAKEGTTLPV 1115
>gi|242805992|ref|XP_002484649.1| conserved hypothetical protein [Talaromyces stipitatus ATCC 10500]
gi|218715274|gb|EED14696.1| conserved hypothetical protein [Talaromyces stipitatus ATCC 10500]
Length = 435
Score = 35.0 bits (79), Expect = 5.6, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Query: 31 LVSDSMGSLSAIANPYLSCPIISQIYSAWCDLKTVGQYYVKLMWCPSHCGIRGNEAVDQA 90
L+S S+GS A+ + S ++ + + L + V++ W P H I GNEA D A
Sbjct: 217 LLSSSIGSSQAV---FKSFNTLAATWPSRRRLLQIESGAVRIRWVPGHANIPGNEAADCA 273
Query: 91 AKD 93
AK+
Sbjct: 274 AKE 276
>gi|328720146|ref|XP_003246964.1| PREDICTED: hypothetical protein LOC100568990, partial
[Acyrthosiphon pisum]
Length = 164
Score = 35.0 bits (79), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 14/26 (53%), Positives = 15/26 (57%)
Query: 73 MWCPSHCGIRGNEAVDQAAKDPLLSP 98
MW P HCGI+GNE D A SP
Sbjct: 8 MWAPGHCGIQGNEKADLEASKAASSP 33
>gi|154271895|ref|XP_001536800.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150408787|gb|EDN04243.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 433
Score = 35.0 bits (79), Expect = 5.7, Method: Composition-based stats.
Identities = 16/33 (48%), Positives = 19/33 (57%)
Query: 67 QYYVKLMWCPSHCGIRGNEAVDQAAKDPLLSPV 99
Q+ V L W P H GI GNE D+ AK + S V
Sbjct: 237 QHNVGLKWAPGHMGIEGNEEADRLAKRAVSSTV 269
>gi|427783949|gb|JAA57426.1| Putative tick transposon [Rhipicephalus pulchellus]
Length = 279
Score = 35.0 bits (79), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 7/89 (7%)
Query: 4 CSNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAIANPYLSCPIISQIYSAWCDLK 63
S AE AI L +R ++ + L++SDS + YL+ +S+I +A
Sbjct: 58 ASVNTAESAAIALAIRDVE-YKTQDALVISDSQSACRQ----YLTG-AVSKITTAKILGT 111
Query: 64 TVGQYYVKLMWCPSHCGIRGNEAVDQAAK 92
+ QY+ ++ CP+H G+ GNE D A+
Sbjct: 112 HIEQYHA-VISCPAHAGLEGNEKADGIAR 139
>gi|427783967|gb|JAA57435.1| Putative tick transposon [Rhipicephalus pulchellus]
Length = 414
Score = 35.0 bits (79), Expect = 5.9, Method: Composition-based stats.
Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 10/47 (21%)
Query: 68 YYVKLMWCPSHCGIRGNEAVDQAAK-------DPLLS---PVIEKKI 104
++ +L+WCP H G+ GNE D A+ +P LS P++ ++I
Sbjct: 243 HHHRLIWCPGHAGLEGNERADALARAFCNRAENPSLSLTIPILPREI 289
>gi|403411627|emb|CCL98327.1| predicted protein [Fibroporia radiculosa]
Length = 766
Score = 35.0 bits (79), Expect = 6.1, Method: Composition-based stats.
Identities = 29/100 (29%), Positives = 50/100 (50%), Gaps = 6/100 (6%)
Query: 4 CSNGIAELIAILLCLRS-IKNHP--AMRFLLVSDSMGSLSAIANPYLSCPIISQIYSA-- 58
C+ AE++A+ + S ++ P +L D+ G+LS I N + + I +A
Sbjct: 287 CAIFDAEMMALARGIHSALQGAPQDCTHLVLCVDNAGALSKILNCEMGPSQLVSILAAEK 346
Query: 59 -WCDLKTVGQYYVKLMWCPSHCGIRGNEAVDQAAKDPLLS 97
L+ ++++ L+W PSH + NE VD+ AK L S
Sbjct: 347 VMEFLQRSERHHISLLWVPSHKDVPPNEFVDELAKSALES 386
>gi|321452689|gb|EFX64018.1| hypothetical protein DAPPUDRAFT_334682 [Daphnia pulex]
Length = 197
Score = 35.0 bits (79), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Query: 62 LKTVGQYYVKLMWCPSHCGIRGNEAVDQAA 91
LK+ G +L W PSH GI GNE D+ A
Sbjct: 120 LKSSGTR-TRLTWIPSHTGIEGNERTDRLA 148
>gi|407865737|gb|EKG08192.1| hypothetical protein TCSYLVIO_000664, partial [Trypanosoma cruzi]
Length = 206
Score = 35.0 bits (79), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 36/77 (46%), Gaps = 3/77 (3%)
Query: 23 NHPAMRFLLVSDSMGSLSAIANPYLSCPIISQIYSAWCDLKTV--GQYYVKLMWCPSHCG 80
H L+V+DS L+A+ LS ++ + W L T+ + V L +C HCG
Sbjct: 47 QHRRKTLLVVTDSQSLLAALNKGPLSQTDWTEDH-IWQRLLTLTCAGWSVHLQFCYGHCG 105
Query: 81 IRGNEAVDQAAKDPLLS 97
+ NE DQ A L S
Sbjct: 106 VHANELADQYATQTLES 122
>gi|427782051|gb|JAA56477.1| Putative tick transposon [Rhipicephalus pulchellus]
Length = 455
Score = 35.0 bits (79), Expect = 6.4, Method: Composition-based stats.
Identities = 27/87 (31%), Positives = 40/87 (45%), Gaps = 4/87 (4%)
Query: 9 AELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAIANPYL-SC--PIISQIYSAWCDLKTV 65
AEL A+ L I + R+ + SDS +L + + C + +I +K
Sbjct: 205 AELTALRCALEYIDSERPSRWAVFSDSKPALQCVRSVLRRGCHEQLTYEIVRLHHRVKEK 264
Query: 66 GQYYVKLMWCPSHCGIRGNEAVDQAAK 92
G + V W P HCGI GN + D AA+
Sbjct: 265 G-HEVDFQWIPGHCGISGNVSADNAAR 290
>gi|427779469|gb|JAA55186.1| Putative tick transposon [Rhipicephalus pulchellus]
gi|427782053|gb|JAA56478.1| Putative tick transposon [Rhipicephalus pulchellus]
Length = 455
Score = 35.0 bits (79), Expect = 6.4, Method: Composition-based stats.
Identities = 27/87 (31%), Positives = 40/87 (45%), Gaps = 4/87 (4%)
Query: 9 AELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAIANPYL-SC--PIISQIYSAWCDLKTV 65
AEL A+ L I + R+ + SDS +L + + C + +I +K
Sbjct: 205 AELTALRCALEYIDSERPSRWAVFSDSKPALQCVRSVLRRGCHEQLTYEIVRLHHRVKEK 264
Query: 66 GQYYVKLMWCPSHCGIRGNEAVDQAAK 92
G + V W P HCGI GN + D AA+
Sbjct: 265 G-HEVDFQWIPGHCGISGNVSADNAAR 290
>gi|427783965|gb|JAA57434.1| Putative tick transposon [Rhipicephalus pulchellus]
Length = 414
Score = 34.7 bits (78), Expect = 6.5, Method: Composition-based stats.
Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 10/47 (21%)
Query: 68 YYVKLMWCPSHCGIRGNEAVDQAAK-------DPLLS---PVIEKKI 104
++ +L+WCP H G+ GNE D A+ +P LS P++ ++I
Sbjct: 243 HHHRLIWCPGHAGLEGNERADALARAFCNRAENPSLSLTIPILPREI 289
>gi|425778657|gb|EKV16767.1| hypothetical protein PDIG_18910 [Penicillium digitatum PHI26]
Length = 1822
Score = 34.7 bits (78), Expect = 6.6, Method: Composition-based stats.
Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
Query: 57 SAWCDL---KTVGQYYVKLMWCPSHCGIRGNEAVDQAAKDPLL 96
S W L + + Q+ + L W P H GI GNEA D A + L
Sbjct: 1633 SQWAFLACHRAMEQHNISLRWAPGHTGIEGNEAADTLAGEGAL 1675
>gi|260533635|gb|ACX45044.1| pol protein [Human immunodeficiency virus 1]
Length = 1003
Score = 34.7 bits (78), Expect = 6.7, Method: Composition-based stats.
Identities = 30/87 (34%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 5 SNGIAELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAI-ANPYLS-CPIISQIYSAWCDL 62
+N AEL AI L L+ +V+DS +L + A P S +++QI
Sbjct: 628 TNQKAELHAIYLALQD----SGSEVNIVTDSQYALGILQAQPDKSESELVNQIIE----- 678
Query: 63 KTVGQYYVKLMWCPSHCGIRGNEAVDQ 89
K +G+ V L W P+H GI GNE V++
Sbjct: 679 KLIGKDKVYLSWVPAHKGIGGNEQVEK 705
>gi|242794525|ref|XP_002482393.1| conserved hypothetical protein [Talaromyces stipitatus ATCC 10500]
gi|218718981|gb|EED18401.1| conserved hypothetical protein [Talaromyces stipitatus ATCC 10500]
Length = 523
Score = 34.7 bits (78), Expect = 6.8, Method: Composition-based stats.
Identities = 13/23 (56%), Positives = 15/23 (65%)
Query: 70 VKLMWCPSHCGIRGNEAVDQAAK 92
V + W P H G+ GNE DQAAK
Sbjct: 300 VTIQWVPGHSGVVGNEQADQAAK 322
>gi|427798887|gb|JAA64895.1| Putative tick transposon, partial [Rhipicephalus pulchellus]
Length = 1199
Score = 34.7 bits (78), Expect = 6.9, Method: Composition-based stats.
Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 2/84 (2%)
Query: 9 AELIAILLCLRSIKNHPAMRFLLVSDSMGSLSAIAN-PYLSCPIISQIYSAWCDLKTVGQ 67
AE AIL ++ I+ + ++ +DS+ + A+ I+ +YS C + T Q
Sbjct: 999 AEAYAILAAVKHIRELKLQKAVIYTDSLSVVKALKTLKKHKNSILVSLYSLVCTVYTAKQ 1058
Query: 68 YYVKLMWCPSHCGIRGNEAVDQAA 91
+ V + W P H I+GN D A
Sbjct: 1059 HVV-VCWVPGHREIQGNVMADHLA 1081
>gi|425779742|gb|EKV17778.1| hypothetical protein PDIG_13540 [Penicillium digitatum PHI26]
Length = 699
Score = 34.7 bits (78), Expect = 7.0, Method: Composition-based stats.
Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
Query: 57 SAWCDL---KTVGQYYVKLMWCPSHCGIRGNEAVDQAAKDPLL 96
S W L + + Q+ + L W P H GI GNEA D A + L
Sbjct: 497 SQWAFLACHRAMEQHNISLRWAPGHTGIEGNEAADTLAGEGAL 539
>gi|321461849|gb|EFX72877.1| hypothetical protein DAPPUDRAFT_325814 [Daphnia pulex]
Length = 308
Score = 34.7 bits (78), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Query: 52 ISQIYSAWCDLKTVGQYYVKLMWCPSHCGIRGNEAVDQAA 91
I+ I LK+ G +L W PSH GI GNE D+ A
Sbjct: 224 ITAIREIIASLKSSGTR-TRLTWIPSHTGIEGNERADRLA 262
>gi|440484572|gb|ELQ64628.1| LOW QUALITY PROTEIN: hypothetical protein OOW_P131scaffold00595g3
[Magnaporthe oryzae P131]
Length = 482
Score = 34.7 bits (78), Expect = 7.0, Method: Composition-based stats.
Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Query: 61 DLKTVGQYYVKLMWCPSHCGIRGNEAVDQAAKDPLLSP 98
+LK G V++ WCP H GI GNE D+ A + P
Sbjct: 130 ELKDTG-VSVRIRWCPGHEGIEGNEKADRLADEGAKGP 166
>gi|242805368|ref|XP_002484512.1| hypothetical protein TSTA_040390 [Talaromyces stipitatus ATCC
10500]
gi|218715137|gb|EED14559.1| hypothetical protein TSTA_040390 [Talaromyces stipitatus ATCC
10500]
Length = 319
Score = 34.7 bits (78), Expect = 7.0, Method: Composition-based stats.
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 7/67 (10%)
Query: 30 LLVSDSMGSLSAIANPYLSCPIISQIYSAWCD--LKTVGQ--YYVKLMWCPSHCGIRGNE 85
++ SDS L + NP + + Q+Y C LK + V++ W P H G+ GNE
Sbjct: 84 VIFSDSQAVLQTLQNPRM---VSGQVYIRDCVELLKECIEEGINVEIRWIPGHEGVPGNE 140
Query: 86 AVDQAAK 92
D+AAK
Sbjct: 141 TADRAAK 147
>gi|425775771|gb|EKV14023.1| hypothetical protein PDIG_35060 [Penicillium digitatum PHI26]
Length = 648
Score = 34.7 bits (78), Expect = 7.1, Method: Composition-based stats.
Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
Query: 57 SAWCDL---KTVGQYYVKLMWCPSHCGIRGNEAVDQAAKDPLL 96
S W L + + Q+ + L W P H GI GNEA D A + L
Sbjct: 446 SQWAFLACHRAMEQHNISLRWAPGHTGIEGNEAADTLAGEGAL 488
>gi|67903322|ref|XP_681917.1| hypothetical protein AN8648.2 [Aspergillus nidulans FGSC A4]
gi|40741492|gb|EAA60682.1| hypothetical protein AN8648.2 [Aspergillus nidulans FGSC A4]
gi|259483134|tpe|CBF78260.1| TPA: conserved hypothetical protein [Aspergillus nidulans FGSC A4]
Length = 1581
Score = 34.7 bits (78), Expect = 7.2, Method: Composition-based stats.
Identities = 25/98 (25%), Positives = 49/98 (50%), Gaps = 15/98 (15%)
Query: 9 AELIAILLCLRSIKNHP----AMRFLLVSDSMGSLSAIANPYLSCP-------IISQIYS 57
AE++ + LR+ P + + +++ D++ + S +A+ Y P SQ+ +
Sbjct: 1320 AEIMGAVEGLRAALGQPCVGYSTQLVILLDNLAAASLLAS-YRPTPHRHGLSETFSQLAA 1378
Query: 58 AWCD---LKTVGQYYVKLMWCPSHCGIRGNEAVDQAAK 92
W + + T+ + +++ W P H GI GNE D+ AK
Sbjct: 1379 QWMESPSILTMQRKPLQVRWIPGHSGIAGNELADKLAK 1416
>gi|71018711|ref|XP_759586.1| hypothetical protein UM03439.1 [Ustilago maydis 521]
gi|46099344|gb|EAK84577.1| predicted protein [Ustilago maydis 521]
Length = 183
Score = 34.7 bits (78), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 15/57 (26%)
Query: 52 ISQIYSAWC-----------DLKTVGQY----YVKLMWCPSHCGIRGNEAVDQAAKD 93
S++Y +C D+ TV Q+ +V ++W HCGI GNE D A++
Sbjct: 36 FSRLYRGYCISIGTRPSSDPDISTVQQFAVAKHVAVVWVTGHCGILGNERADSLAQN 92
>gi|154284596|ref|XP_001543093.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150406734|gb|EDN02275.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 808
Score = 34.7 bits (78), Expect = 7.6, Method: Composition-based stats.
Identities = 14/26 (53%), Positives = 16/26 (61%)
Query: 67 QYYVKLMWCPSHCGIRGNEAVDQAAK 92
Q+ V L W P H GI GNE D+ AK
Sbjct: 609 QHNVSLKWAPGHMGIEGNEEADRLAK 634
>gi|425773357|gb|EKV11713.1| hypothetical protein PDIG_48450 [Penicillium digitatum PHI26]
Length = 1136
Score = 34.7 bits (78), Expect = 7.7, Method: Composition-based stats.
Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
Query: 57 SAWCDL---KTVGQYYVKLMWCPSHCGIRGNEAVDQAAKDPLL 96
S W L + + Q+ + L W P H GI GNEA D A + L
Sbjct: 934 SQWAFLACHRAMEQHNISLRWAPGHTGIEGNEAADTLAGEGAL 976
>gi|321453396|gb|EFX64636.1| hypothetical protein DAPPUDRAFT_333996 [Daphnia pulex]
Length = 292
Score = 34.7 bits (78), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Query: 60 CDLKTVGQYYVKLMWCPSHCGIRGNEAVDQAA 91
LK+ G +L W PSH GI GNE D+ A
Sbjct: 232 ASLKSSGTR-TRLTWIPSHTGIEGNERTDRLA 262
>gi|154277654|ref|XP_001539665.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150413250|gb|EDN08633.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 1489
Score = 34.7 bits (78), Expect = 7.7, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 18/31 (58%)
Query: 67 QYYVKLMWCPSHCGIRGNEAVDQAAKDPLLS 97
Q+ V L W P H GI GNE D+ AK + S
Sbjct: 1286 QHNVGLKWAPGHMGIEGNEEADRLAKQAVSS 1316
>gi|425779685|gb|EKV17723.1| putative RNA-directed DNA polymerase from transposon X-element
[Penicillium digitatum PHI26]
Length = 1267
Score = 34.7 bits (78), Expect = 7.9, Method: Composition-based stats.
Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
Query: 57 SAWCDL---KTVGQYYVKLMWCPSHCGIRGNEAVDQAAKDPLL 96
S W L + + Q+ + L W P H GI GNEA D A + L
Sbjct: 1065 SQWAFLACHRAMEQHNISLRWAPGHTGIEGNEAADTLAGEGAL 1107
>gi|425774883|gb|EKV13176.1| hypothetical protein PDIG_39510 [Penicillium digitatum PHI26]
Length = 1756
Score = 34.7 bits (78), Expect = 8.1, Method: Composition-based stats.
Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
Query: 57 SAWCDL---KTVGQYYVKLMWCPSHCGIRGNEAVDQAAKDPLL 96
S W L + + Q+ + L W P H GI GNEA D A + L
Sbjct: 1554 SQWAFLACHRAMEQHNISLRWAPGHTGIEGNEAADTLAGEGAL 1596
>gi|407854071|gb|EKG06639.1| hypothetical protein TCSYLVIO_002250, partial [Trypanosoma cruzi]
Length = 222
Score = 34.7 bits (78), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 34/77 (44%), Gaps = 3/77 (3%)
Query: 23 NHPAMRFLLVSDSMGSLSAIANPYLSCP--IISQIYSAWCDLKTVGQYYVKLMWCPSHCG 80
H L+V+DS L+A+ LS QI+ L G + V L +C HCG
Sbjct: 6 RHRRKTLLVVTDSQSLLAALNKGPLSQTDWTEDQIWQRLLTLTCAG-WSVHLQFCYGHCG 64
Query: 81 IRGNEAVDQAAKDPLLS 97
+ NE DQ A + S
Sbjct: 65 VHANELADQYATQTMES 81
>gi|425775217|gb|EKV13499.1| hypothetical protein PDIG_38810 [Penicillium digitatum PHI26]
Length = 1766
Score = 34.3 bits (77), Expect = 8.4, Method: Composition-based stats.
Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
Query: 57 SAWCDL---KTVGQYYVKLMWCPSHCGIRGNEAVDQAAKDPLL 96
S W L + + Q+ + L W P H GI GNEA D A + L
Sbjct: 1564 SQWAFLACHRAMEQHNISLRWAPGHTGIEGNEAADTLAGEGAL 1606
>gi|425778793|gb|EKV16898.1| hypothetical protein PDIG_18140 [Penicillium digitatum PHI26]
Length = 1766
Score = 34.3 bits (77), Expect = 8.5, Method: Composition-based stats.
Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
Query: 57 SAWCDL---KTVGQYYVKLMWCPSHCGIRGNEAVDQAAKDPLL 96
S W L + + Q+ + L W P H GI GNEA D A + L
Sbjct: 1564 SQWAFLACHRAMEQHNISLRWAPGHTGIEGNEAADTLAGEGAL 1606
>gi|425778854|gb|EKV16957.1| hypothetical protein PDIG_17630 [Penicillium digitatum PHI26]
Length = 872
Score = 34.3 bits (77), Expect = 8.5, Method: Composition-based stats.
Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
Query: 57 SAWCDL---KTVGQYYVKLMWCPSHCGIRGNEAVDQAAKDPLL 96
S W L + + Q+ + L W P H GI GNEA D A + L
Sbjct: 670 SQWAFLACHRAMEQHNISLRWAPGHTGIEGNEAADTLAGEGAL 712
>gi|380490755|emb|CCF35795.1| reverse transcriptase [Colletotrichum higginsianum]
Length = 906
Score = 34.3 bits (77), Expect = 8.5, Method: Composition-based stats.
Identities = 13/24 (54%), Positives = 15/24 (62%)
Query: 70 VKLMWCPSHCGIRGNEAVDQAAKD 93
V + WCP H GI GNE D AK+
Sbjct: 728 VYIWWCPGHTGIAGNEEADALAKE 751
>gi|358376686|dbj|GAA93218.1| reverse transcriptase [Aspergillus kawachii IFO 4308]
Length = 640
Score = 34.3 bits (77), Expect = 8.6, Method: Composition-based stats.
Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Query: 53 SQIYSAWCDLKTVGQYYVKLMWCPSHCGIRGNEAVDQAAKD 93
+ I S +LK G ++L W P HCG GNE D+ AK+
Sbjct: 413 ATILSDTAELKARG-IPLRLQWVPGHCGDPGNETADRLAKE 452
>gi|326483666|gb|EGE07676.1| hypothetical protein TEQG_08765 [Trichophyton equinum CBS 127.97]
Length = 405
Score = 34.3 bits (77), Expect = 9.0, Method: Composition-based stats.
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Query: 29 FLLVSDSMGSLSAIANPYLSCP--IISQIYSAWCDLKTVGQYYVKLMWCPSHCGIRGNEA 86
F + DS ++ + YL +S+I +LK Y +K++W P+H I GNE
Sbjct: 169 FWVFIDSQAAIQRLQKSYLEGGEMYVSRIRRIAKELKD-RDYQIKIVWVPAHQNILGNEK 227
Query: 87 VDQAAK 92
D AAK
Sbjct: 228 ADFAAK 233
>gi|154283217|ref|XP_001542404.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150410584|gb|EDN05972.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 375
Score = 34.3 bits (77), Expect = 9.6, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 18/31 (58%)
Query: 67 QYYVKLMWCPSHCGIRGNEAVDQAAKDPLLS 97
Q+ V L W P H GI GNE D+ AK + S
Sbjct: 179 QHNVGLKWAPGHMGIEGNEEADRLAKQAVSS 209
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.325 0.137 0.441
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,502,854,064
Number of Sequences: 23463169
Number of extensions: 49498892
Number of successful extensions: 128178
Number of sequences better than 100.0: 733
Number of HSP's better than 100.0 without gapping: 162
Number of HSP's successfully gapped in prelim test: 571
Number of HSP's that attempted gapping in prelim test: 127906
Number of HSP's gapped (non-prelim): 747
length of query: 104
length of database: 8,064,228,071
effective HSP length: 73
effective length of query: 31
effective length of database: 6,351,416,734
effective search space: 196893918754
effective search space used: 196893918754
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 69 (31.2 bits)